RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy4686
(2028 letters)
>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex;
1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*
Length = 190
Score = 147 bits (373), Expect = 3e-40
Identities = 71/193 (36%), Positives = 97/193 (50%), Gaps = 14/193 (7%)
Query: 909 MKFKSKSFLSEHINTHTGNKPYQCQICKKSFANKRSYQRDLKRHKQLAGQLKPEDIHECK 968
+ S G KPY C C KSF ++ + L H++ KP ++C
Sbjct: 1 ISEFGSSSSVAQAALEPGEKPYACPECGKSF-SRSDH---LAEHQRTHTGEKP---YKCP 53
Query: 969 ICHKTFLEKGSLAKHMNWVH-GDKCHICKVCGA--KIKGNLQKHMLSHTGEKPFCCHICG 1025
C K+F +K L +H H G+K + C CG + NL+ H +HTGEKP+ C CG
Sbjct: 54 ECGKSFSDKKDLTRHQR-THTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECG 112
Query: 1026 K--SLKGNLKDHILKCHTGERPYKCDVCGSSFKDKWYLGVHMRKHNGEKPYNCDYCGQTF 1083
K S +L+ H + HTGE+PYKC CG SF + L H R H GEKPY C CG++F
Sbjct: 113 KSFSQLAHLRAH-QRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSF 171
Query: 1084 AARSTFTFHLKKH 1096
+ R H + H
Sbjct: 172 SRRDALNVHQRTH 184
Score = 131 bits (332), Expect = 9e-35
Identities = 72/184 (39%), Positives = 100/184 (54%), Gaps = 14/184 (7%)
Query: 895 IKTIERKFECDYCKMKFKSKSFLSEHINTHTGNKPYQCQICKKSFANKRSYQRDLKRHKQ 954
++ E+ + C C F L+EH THTG KPY+C C KSF++K+ L RH++
Sbjct: 15 LEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKD----LTRHQR 70
Query: 955 LAGQLKPEDIHECKICHKTFLEKGSLAKHMNWVH-GDKCHICKVCGA--KIKGNLQKHML 1011
KP ++C C K+F ++ +L H H G+K + C CG +L+ H
Sbjct: 71 THTGEKP---YKCPECGKSFSQRANLRAHQR-THTGEKPYACPECGKSFSQLAHLRAHQR 126
Query: 1012 SHTGEKPFCCHICGK--SLKGNLKDHILKCHTGERPYKCDVCGSSFKDKWYLGVHMRKHN 1069
+HTGEKP+ C CGK S + NL H + HTGE+PYKC CG SF + L VH R H
Sbjct: 127 THTGEKPYKCPECGKSFSREDNLHTH-QRTHTGEKPYKCPECGKSFSRRDALNVHQRTHT 185
Query: 1070 GEKP 1073
G+K
Sbjct: 186 GKKT 189
Score = 82.9 bits (206), Expect = 6e-18
Identities = 65/203 (32%), Positives = 90/203 (44%), Gaps = 28/203 (13%)
Query: 1834 FKASRSLQCHKQFVHLGVHKPKFLNMECDYCSRKFPSKNEVTNHIKSHMGVRDILCPICK 1893
S S + G KP C C + F + + H ++H G + CP C
Sbjct: 3 EFGSSSSVAQ-AALEPG-EKP----YACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECG 56
Query: 1894 KGFIALKHMKTHLKKHMWKAGEIPLEDTYLCDLCSKVFLEHKDMIRHREWVH-GDKCHVC 1952
K F K + H + H GE P Y C C K F + ++ H+ H G+K + C
Sbjct: 57 KSFSDKKDLTRHQRTH---TGEKP----YKCPECGKSFSQRANLRAHQR-THTGEKPYAC 108
Query: 1953 KVCGA--KIKGNMKRHMLSHTGEKPFCCDICGK--SLKGNLKAHILRCQ----GERPYKC 2004
CG +++ H +HTGEKP+ C CGK S + NL H Q GE+PYKC
Sbjct: 109 PECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTH----QRTHTGEKPYKC 164
Query: 2005 DVCGSSFKDKKHFSVHIRNH-GE 2026
CG SF + +VH R H G+
Sbjct: 165 PECGKSFSRRDALNVHQRTHTGK 187
Score = 82.1 bits (204), Expect = 1e-17
Identities = 60/230 (26%), Positives = 86/230 (37%), Gaps = 56/230 (24%)
Query: 1366 RRKFDLKEHINKHTGNKPYHCQICKESFYTLKTYRGDLKRHEQLAEQSDEMHSTSKFQNK 1425
G KPY C C +SF + L H++ H+
Sbjct: 4 FGSSSSVAQAALEPGEKPYACPECGKSF----SRSDHLAEHQR-------THT------- 45
Query: 1426 IKKPLDTGDLSWEEWNELVLSGTK--KCPVCHKTYSTPRQMRIHLREAHS-QKKYACDVC 1482
G K KCP C K++S + + H R H+ +K Y C C
Sbjct: 46 ---------------------GEKPYKCPECGKSFSDKKDLTRHQR-THTGEKPYKCPEC 83
Query: 1483 GKQFTSTNRVSQHKAHSHFGIIKTIQRKFECDFCKKKFYRNFDLQEHINTHTGNKPYQCQ 1542
GK F+ + H+ T ++ + C C K F + L+ H THTG KPY+C
Sbjct: 84 GKSFSQRANLRAHQR------THTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCP 137
Query: 1543 ICNKSFGTRRNYRLHLKRHKRSAGQLKPEDIHECKICHKIFLENSRLTRH 1592
C KSF + +L H+R+ KP ++C C K F L H
Sbjct: 138 ECGKSF----SREDNLHTHQRTHTGEKP---YKCPECGKSFSRRDALNVH 180
Score = 81.0 bits (201), Expect = 3e-17
Identities = 51/178 (28%), Positives = 77/178 (43%), Gaps = 40/178 (22%)
Query: 841 CPVCHKTYSTPKSMRKHLREVHSSQKKYVCDMCGKQFTSNNRVSQHKAYSHFGIIKTIER 900
CP C K++S K + +H R H+ +K Y C CGK F+ + H+ T E+
Sbjct: 52 CPECGKSFSDKKDLTRHQR-THTGEKPYKCPECGKSFSQRANLRAHQR------THTGEK 104
Query: 901 KFECDYCKMKFKSKSFLSEHINTHTGNKPYQCQICKKSFANKRSYQRDLKRHKQLAGQLK 960
+ C C F + L H THTG KPY+C C KSF+ + + L H++ K
Sbjct: 105 PYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDN----LHTHQRTHTGEK 160
Query: 961 PEDIHECKICHKTFLEKGSLAKHMNWVHGDKCHICKVCGAKIKGNLQKHMLSHTGEKP 1018
P ++C C K+F + +L H Q+ +HTG+K
Sbjct: 161 P---YKCPECGKSFSRRDALNVH-----------------------QR---THTGKKT 189
Score = 79.8 bits (198), Expect = 7e-17
Identities = 47/142 (33%), Positives = 64/142 (45%), Gaps = 14/142 (9%)
Query: 571 QCPICEKIFAAPKQMRMHLRHVHSSIKRYMCDICGKQFTTLSYLDLHRKSHNETVKRKEE 630
+CP C K F+ K + H R H+ K Y C CGK F+ + L H+++H
Sbjct: 51 KCPECGKSFSDKKDLTRHQR-THTGEKPYKCPECGKSFSQRANLRAHQRTHTG------- 102
Query: 631 DKKYECDSCNKKFWSKRALSEHMIIHTGIKEHQCHVCNTAFYHIRSLSRHLKIH--EYNE 688
+K Y C C K F L H HTG K ++C C +F +L H + H E
Sbjct: 103 EKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGE--- 159
Query: 689 SKMYKCPVCSKMFTELYEMKRH 710
K YKCP C K F+ + H
Sbjct: 160 -KPYKCPECGKSFSRRDALNVH 180
Score = 77.9 bits (193), Expect = 4e-16
Identities = 70/255 (27%), Positives = 97/255 (38%), Gaps = 86/255 (33%)
Query: 1313 RRHLRQVHTSQKRYLCDICGKQFTSTNRVNIHKACVHSSTGNK-FECIYCKKKYRRKFDL 1371
+ +K Y C CGK F+ ++ + H+ H TG K ++C C K + K DL
Sbjct: 10 VAQAA-LEPGEKPYACPECGKSFSRSDHLAEHQR-TH--TGEKPYKCPECGKSFSDKKDL 65
Query: 1372 KEHINKHTGNKPYHCQICKESFYTLKTYRGDLKRHEQLAEQSDEMHSTSKFQNKIKKPLD 1431
H HTG KPY C C +SF + R +L+ H++ H
Sbjct: 66 TRHQRTHTGEKPYKCPECGKSF----SQRANLRAHQR-------TH-------------- 100
Query: 1432 TGDLSWEEWNELVLSGTK--KCPVCHKTYSTPRQMRIHLREAHSQKK-YACDVCGKQFTS 1488
+G K CP C K++S +R H R H+ +K Y C CGK F+
Sbjct: 101 --------------TGEKPYACPECGKSFSQLAHLRAHQR-THTGEKPYKCPECGKSFS- 144
Query: 1489 TNRVSQHKAHSHFGIIKTIQRKFECDFCKKKFYRNFDLQEHINTHTGNKPYQCQICNKSF 1548
R +L H THTG KPY+C C KSF
Sbjct: 145 ---------------------------------REDNLHTHQRTHTGEKPYKCPECGKSF 171
Query: 1549 GTRRNYRLHLKRHKR 1563
+ R L H+R
Sbjct: 172 ----SRRDALNVHQR 182
Score = 77.1 bits (191), Expect = 7e-16
Identities = 59/204 (28%), Positives = 82/204 (40%), Gaps = 43/204 (21%)
Query: 586 RMHLRHVHSSIKRYMCDICGKQFTTLSYLDLHRKSHNETVKRKEEDKKYECDSCNKKFWS 645
+ K Y C CGK F+ +L H+++H +K Y+C C K F
Sbjct: 10 VAQAA-LEPGEKPYACPECGKSFSRSDHLAEHQRTHT-------GEKPYKCPECGKSFSD 61
Query: 646 KRALSEHMIIHTGIKEHQCHVCNTAFYHIRSLSRHLKIH--EYNESKMYKCPVCSKMFTE 703
K+ L+ H HTG K ++C C +F +L H + H E K Y CP C K F++
Sbjct: 62 KKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTHTGE----KPYACPECGKSFSQ 117
Query: 704 LYEMKRH-RDHKHGGKCHVCKICGATIKLFTELEEKEDSSFERKKSKDSFH--------- 753
L ++ H R H G K + C CG K F+ + H
Sbjct: 118 LAHLRAHQRTHT-GEKPYKCPECG---KSFSR------------EDNLHTHQRTHTGEKP 161
Query: 754 --CDTCGKYFRSRQICNKHIKRVH 775
C CGK F R N H +R H
Sbjct: 162 YKCPECGKSFSRRDALNVH-QRTH 184
Score = 71.7 bits (177), Expect = 5e-14
Identities = 58/209 (27%), Positives = 77/209 (36%), Gaps = 47/209 (22%)
Query: 608 FTTLSYLDLHRKSHNETVKRKEEDKKYECDSCNKKFWSKRALSEHMIIHTGIKEHQCHVC 667
S +K Y C C K F L+EH HTG K ++C C
Sbjct: 3 EFGSSSSVAQAALEPG-------EKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPEC 55
Query: 668 NTAFYHIRSLSRHLKIH--EYNESKMYKCPVCSKMFTELYEMKRH-RDHKHGGKCHVCKI 724
+F + L+RH + H E K YKCP C K F++ ++ H R H G K + C
Sbjct: 56 GKSFSDKKDLTRHQRTHTGE----KPYKCPECGKSFSQRANLRAHQRTHT-GEKPYACPE 110
Query: 725 CGATIKLFTELEEKEDSSFERKKSKDSFH-----------CDTCGKYFRSRQICNKHIKR 773
CG K F++ + H C CGK F + H +R
Sbjct: 111 CG---KSFSQ------------LAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTH-QR 154
Query: 774 VHLNPT--KTFKCDLCSDRFSTSAKLKKH 800
H T K +KC C FS L H
Sbjct: 155 TH---TGEKPYKCPECGKSFSRRDALNVH 180
Score = 63.2 bits (155), Expect = 4e-11
Identities = 40/109 (36%), Positives = 54/109 (49%), Gaps = 9/109 (8%)
Query: 1299 CPVCHKTYSTPKTMRRHLRQVHTSQKRYLCDICGKQFTSTNRVNIHKACVHSSTGNK-FE 1357
CP C K++S K + RH R HT +K Y C CGK F+ + H+ H TG K +
Sbjct: 52 CPECGKSFSDKKDLTRHQR-THTGEKPYKCPECGKSFSQRANLRAHQR-TH--TGEKPYA 107
Query: 1358 CIYCKKKYRRKFDLKEHINKHTGNKPYHCQICKESFYTLKTYRGDLKRH 1406
C C K + + L+ H HTG KPY C C +SF + +L H
Sbjct: 108 CPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSF----SREDNLHTH 152
Score = 61.7 bits (151), Expect = 1e-10
Identities = 41/109 (37%), Positives = 55/109 (50%), Gaps = 9/109 (8%)
Query: 1299 CPVCHKTYSTPKTMRRHLRQVHTSQKRYLCDICGKQFTSTNRVNIHKACVHSSTGNK-FE 1357
CP C K++S +R H R HT +K Y C CGK F+ + H+ H TG K ++
Sbjct: 80 CPECGKSFSQRANLRAHQR-THTGEKPYACPECGKSFSQLAHLRAHQR-TH--TGEKPYK 135
Query: 1358 CIYCKKKYRRKFDLKEHINKHTGNKPYHCQICKESFYTLKTYRGDLKRH 1406
C C K + R+ +L H HTG KPY C C +SF + R L H
Sbjct: 136 CPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSF----SRRDALNVH 180
Score = 59.8 bits (146), Expect = 6e-10
Identities = 65/267 (24%), Positives = 93/267 (34%), Gaps = 86/267 (32%)
Query: 670 AFYHIRSLSRHLKIH--EYNESKMYKCPVCSKMFTELYEMKRH-RDHKHGGKCHVCKICG 726
+ + S + E K Y CP C K F+ + H R H
Sbjct: 2 SEFGSSSSVAQAALEPGE----KPYACPECGKSFSRSDHLAEHQRTHTG----------- 46
Query: 727 ATIKLFTELEEKEDSSFERKKSKDSFHCDTCGKYFRSRQICNKHIKRVHLNPT--KTFKC 784
EK + C CGK F ++ +H +R H T K +KC
Sbjct: 47 ----------EK------------PYKCPECGKSFSDKKDLTRH-QRTH---TGEKPYKC 80
Query: 785 DLCSDRFSTSAKLKKHVDKIHFTPEFQEPSKKNEPLDTGD--YTLEQWNELVTAQSKDCP 842
C FS A L+ H + H TG+ Y CP
Sbjct: 81 PECGKSFSQRANLRAH-QRTH----------------TGEKPYA--------------CP 109
Query: 843 VCHKTYSTPKSMRKHLREVHSSQKKYVCDMCGKQFTSNNRVSQHKAYSHFGIIKTIERKF 902
C K++S +R H R H+ +K Y C CGK F+ + + H+ T E+ +
Sbjct: 110 ECGKSFSQLAHLRAHQR-THTGEKPYKCPECGKSFSREDNLHTHQ------RTHTGEKPY 162
Query: 903 ECDYCKMKFKSKSFLSEHINTHTGNKP 929
+C C F + L+ H THTG K
Sbjct: 163 KCPECGKSFSRRDALNVHQRTHTGKKT 189
Score = 58.6 bits (143), Expect = 2e-09
Identities = 56/182 (30%), Positives = 82/182 (45%), Gaps = 20/182 (10%)
Query: 1798 CPVCNKEYATPVTMRKHLREVHVSKKKFKCDLCQKQFKASRSLQCHKQFVHLGVHKPKFL 1857
CP C K ++ + +H R H +K +KC C K F + L H Q H G KP
Sbjct: 24 CPECGKSFSRSDHLAEHQR-THTGEKPYKCPECGKSFSDKKDLTRH-QRTHTG-EKP--- 77
Query: 1858 NMECDYCSRKFPSKNEVTNHIKSHMGVRDILCPICKKGFIALKHMKTHLKKHMWKAGEIP 1917
+C C + F + + H ++H G + CP C K F L H++ H + H GE P
Sbjct: 78 -YKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTH---TGEKP 133
Query: 1918 LEDTYLCDLCSKVFLEHKDMIRHREWVH-GDKCHVCKVCGAKI---KGNMKRHMLSHTGE 1973
Y C C K F ++ H+ H G+K + C CG K + + H +HTG+
Sbjct: 134 ----YKCPECGKSFSREDNLHTHQ-RTHTGEKPYKCPECG-KSFSRRDALNVHQRTHTGK 187
Query: 1974 KP 1975
K
Sbjct: 188 KT 189
Score = 54.8 bits (133), Expect = 3e-08
Identities = 23/73 (31%), Positives = 31/73 (42%), Gaps = 7/73 (9%)
Query: 1520 FYRNFDLQEHINTHTGNKPYQCQICNKSFGTRRNYRLHLKRHKRSAGQLKPEDIHECKIC 1579
+ + G KPY C C KSF + HL H+R+ KP ++C C
Sbjct: 3 EFGSSSSVAQAALEPGEKPYACPECGKSF----SRSDHLAEHQRTHTGEKP---YKCPEC 55
Query: 1580 HKIFLENSRLTRH 1592
K F + LTRH
Sbjct: 56 GKSFSDKKDLTRH 68
Score = 54.0 bits (131), Expect = 6e-08
Identities = 60/241 (24%), Positives = 81/241 (33%), Gaps = 85/241 (35%)
Query: 430 ECDYCKRKFTCKRYLAEHINAHTGNTIYGCRICKKTFLYTNGLRRHILSRHKDTDVVILN 489
C C + F+ +LAEH HTG Y C C K+F S
Sbjct: 23 ACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSF-----------SDK--------- 62
Query: 490 EVKDIFPSHLQSYQI--------KCRYCARTFSTQNDLKEHVSSVHMFMTESFENPNEPR 541
L +Q KC C ++FS + +L+ H
Sbjct: 63 -------KDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAH------------------- 96
Query: 542 VLNSNRYPLAIDGGLSLEEYQQIVAT--KSKQCPICEKIFAAPKQMRMHLRHVHSSIKRY 599
Q T K CP C K F+ +R H R H+ K Y
Sbjct: 97 ---------------------QRTHTGEKPYACPECGKSFSQLAHLRAHQR-THTGEKPY 134
Query: 600 MCDICGKQFTTLSYLDLHRKSHNETVKRKEEDKKYECDSCNKKFWSKRALSEHMIIHTGI 659
C CGK F+ L H+++H +K Y+C C K F + AL+ H HTG
Sbjct: 135 KCPECGKSFSREDNLHTHQRTHTG-------EKPYKCPECGKSFSRRDALNVHQRTHTGK 187
Query: 660 K 660
K
Sbjct: 188 K 188
Score = 53.6 bits (130), Expect = 7e-08
Identities = 34/113 (30%), Positives = 46/113 (40%), Gaps = 18/113 (15%)
Query: 370 QCPLCTKIFTTAKHMRVHLRSVHNGKERKFICDICGKQFTSNIHASRH-------KNYAH 422
+CP C K F+ K + H R H G E+ + C CGK F+ + H K Y
Sbjct: 51 KCPECGKSFSDKKDLTRHQR-THTG-EKPYKCPECGKSFSQRANLRAHQRTHTGEKPY-- 106
Query: 423 SRDRQKMECDYCKRKFTCKRYLAEHINAHTGNTIYGCRICKKTFLYTNGLRRH 475
C C + F+ +L H HTG Y C C K+F + L H
Sbjct: 107 -------ACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTH 152
Score = 52.1 bits (126), Expect = 3e-07
Identities = 35/113 (30%), Positives = 48/113 (42%), Gaps = 18/113 (15%)
Query: 370 QCPLCTKIFTTAKHMRVHLRSVHNGKERKFICDICGKQFTSNIHASRH-------KNYAH 422
+CP C K F+ ++R H R H G E+ + C CGK F+ H H K Y
Sbjct: 79 KCPECGKSFSQRANLRAHQR-THTG-EKPYACPECGKSFSQLAHLRAHQRTHTGEKPY-- 134
Query: 423 SRDRQKMECDYCKRKFTCKRYLAEHINAHTGNTIYGCRICKKTFLYTNGLRRH 475
+C C + F+ + L H HTG Y C C K+F + L H
Sbjct: 135 -------KCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVH 180
Score = 48.2 bits (116), Expect = 5e-06
Identities = 32/86 (37%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Query: 1299 CPVCHKTYSTPKTMRRHLRQVHTSQKRYLCDICGKQFTSTNRVNIHKACVHSSTGNK-FE 1357
CP C K++S +R H R HT +K Y C CGK F+ + ++ H+ H TG K ++
Sbjct: 108 CPECGKSFSQLAHLRAHQR-THTGEKPYKCPECGKSFSREDNLHTHQR-TH--TGEKPYK 163
Query: 1358 CIYCKKKYRRKFDLKEHINKHTGNKP 1383
C C K + R+ L H HTG K
Sbjct: 164 CPECGKSFSRRDALNVHQRTHTGKKT 189
Score = 47.8 bits (115), Expect = 6e-06
Identities = 28/105 (26%), Positives = 40/105 (38%), Gaps = 18/105 (17%)
Query: 378 FTTAKHMRVHLRSVHNGKERKFICDICGKQFTSNIHASRH-------KNYAHSRDRQKME 430
+ + G E+ + C CGK F+ + H + H K Y +
Sbjct: 3 EFGSSSSVAQAA-LEPG-EKPYACPECGKSFSRSDHLAEHQRTHTGEKPY---------K 51
Query: 431 CDYCKRKFTCKRYLAEHINAHTGNTIYGCRICKKTFLYTNGLRRH 475
C C + F+ K+ L H HTG Y C C K+F LR H
Sbjct: 52 CPECGKSFSDKKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAH 96
Score = 40.1 bits (95), Expect = 0.002
Identities = 28/91 (30%), Positives = 38/91 (41%), Gaps = 18/91 (19%)
Query: 370 QCPLCTKIFTTAKHMRVHLRSVHNGKERKFICDICGKQFTSNIHASRH-------KNYAH 422
CP C K F+ H+R H R H G E+ + C CGK F+ + H K Y
Sbjct: 107 ACPECGKSFSQLAHLRAHQR-THTG-EKPYKCPECGKSFSREDNLHTHQRTHTGEKPY-- 162
Query: 423 SRDRQKMECDYCKRKFTCKRYLAEHINAHTG 453
+C C + F+ + L H HTG
Sbjct: 163 -------KCPECGKSFSRRDALNVHQRTHTG 186
>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Mus musculus} SCOP: g.37.1.1
g.37.1.1 g.37.1.1 g.37.1.1
Length = 124
Score = 107 bits (271), Expect = 2e-27
Identities = 40/110 (36%), Positives = 50/110 (45%), Gaps = 6/110 (5%)
Query: 989 GDKCHICKVCGAKI--KGNLQKHMLSHTGEKPFCCHICGK--SLKGNLKDH--ILKCHTG 1042
G C C K K L+ H HTGEKPF C CGK K NL +H +
Sbjct: 4 GSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRS 63
Query: 1043 ERPYKCDVCGSSFKDKWYLGVHMRKHNGEKPYNCDYCGQTFAARSTFTFH 1092
E+ + C VC +F+ + L +HM H GE PY C C Q F + H
Sbjct: 64 EQVFTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSH 113
Score = 96.4 bits (241), Expect = 2e-23
Identities = 40/152 (26%), Positives = 58/152 (38%), Gaps = 34/152 (22%)
Query: 924 HTGNKPYQCQICKKSFANKRSYQRDLKRHKQLAGQLKPEDIHECKICHKTFLEKGSLAKH 983
+G+ +C C K F +K LK H + KP EC C K + K +L +H
Sbjct: 2 SSGSSGVECPTCHKKFLSKYY----LKVHNRKHTGEKP---FECPKCGKCYFRKENLLEH 54
Query: 984 MNWVHGDKCHICKVCGAKIKGNLQKHMLSHTGEKPFCCHICGK--SLKGNLKDHILKCHT 1041
+ + E+ F C +C + + L+ H + HT
Sbjct: 55 -----------------------EARNCMNRSEQVFTCSVCQETFRRRMELRLH-MVSHT 90
Query: 1042 GERPYKCDVCGSSFKDKWYLGVHM-RKHNGEK 1072
GE PYKC C F K L HM + H+G
Sbjct: 91 GEMPYKCSSCSQQFMQKKDLQSHMIKLHSGPS 122
Score = 92.2 bits (230), Expect = 7e-22
Identities = 27/89 (30%), Positives = 39/89 (43%), Gaps = 6/89 (6%)
Query: 1013 HTGEKPFCCHICGK--SLKGNLKDHILKCHTGERPYKCDVCGSSFKDKWYLGVHMRK--- 1067
+G C C K K LK H + HTGE+P++C CG + K L H +
Sbjct: 2 SSGSSGVECPTCHKKFLSKYYLKVH-NRKHTGEKPFECPKCGKCYFRKENLLEHEARNCM 60
Query: 1068 HNGEKPYNCDYCGQTFAARSTFTFHLKKH 1096
+ E+ + C C +TF R H+ H
Sbjct: 61 NRSEQVFTCSVCQETFRRRMELRLHMVSH 89
Score = 73.3 bits (181), Expect = 2e-15
Identities = 32/131 (24%), Positives = 52/131 (39%), Gaps = 17/131 (12%)
Query: 1471 AHS-QKKYACDVCGKQFTSTNRVSQHKAHSHFGIIKTIQRKFECDFCKKKFYRNFDLQEH 1529
S C C K+F S + H T ++ FEC C K ++R +L EH
Sbjct: 1 GSSGSSGVECPTCHKKFLSKYYLKVHNR------KHTGEKPFECPKCGKCYFRKENLLEH 54
Query: 1530 ---INTHTGNKPYQCQICNKSFGTRRNYRLHLKRHKRSAGQLKPEDIHECKICHKIFLEN 1586
+ + + C +C ++F R+ L+ H S P ++C C + F++
Sbjct: 55 EARNCMNRSEQVFTCSVCQETF----RRRMELRLHMVSHTGEMP---YKCSSCSQQFMQK 107
Query: 1587 SRLTRHMNFTH 1597
L HM H
Sbjct: 108 KDLQSHMIKLH 118
Score = 72.2 bits (178), Expect = 6e-15
Identities = 33/114 (28%), Positives = 57/114 (50%), Gaps = 8/114 (7%)
Query: 841 CPVCHKTYSTPKSMRKHLREVHSSQKKYVCDMCGKQFTSNNRVSQHKAYSHFGIIKTIER 900
CP CHK + + ++ H R H+ +K + C CGK + + +H+A + + E+
Sbjct: 10 CPTCHKKFLSKYYLKVHNR-KHTGEKPFECPKCGKCYFRKENLLEHEARN---CMNRSEQ 65
Query: 901 KFECDYCKMKFKSKSFLSEHINTHTGNKPYQCQICKKSFANKRSYQRDLKRHKQ 954
F C C+ F+ + L H+ +HTG PY+C C + F ++DL+ H
Sbjct: 66 VFTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQF----MQKKDLQSHMI 115
Score = 71.4 bits (176), Expect = 1e-14
Identities = 34/109 (31%), Positives = 55/109 (50%), Gaps = 6/109 (5%)
Query: 1299 CPVCHKTYSTPKTMRRHLRQVHTSQKRYLCDICGKQFTSTNRVNIHKACVHSSTGNK-FE 1357
CP CHK + + ++ H R HT +K + C CGK + + H+A + + F
Sbjct: 10 CPTCHKKFLSKYYLKVHNR-KHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFT 68
Query: 1358 CIYCKKKYRRKFDLKEHINKHTGNKPYHCQICKESFYTLKTYRGDLKRH 1406
C C++ +RR+ +L+ H+ HTG PY C C + F + DL+ H
Sbjct: 69 CSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQF----MQKKDLQSH 113
Score = 71.4 bits (176), Expect = 1e-14
Identities = 30/111 (27%), Positives = 62/111 (55%), Gaps = 3/111 (2%)
Query: 1450 KCPVCHKTYSTPRQMRIHLREAHSQKKYACDVCGKQFTSTNRVSQHKAHSHFGIIKTIQR 1509
+CP CHK + + +++H R+ +K + C CGK + + +H+A + + ++
Sbjct: 9 ECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARN---CMNRSEQ 65
Query: 1510 KFECDFCKKKFYRNFDLQEHINTHTGNKPYQCQICNKSFGTRRNYRLHLKR 1560
F C C++ F R +L+ H+ +HTG PY+C C++ F +++ + H+ +
Sbjct: 66 VFTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIK 116
Score = 71.0 bits (175), Expect = 2e-14
Identities = 35/130 (26%), Positives = 52/130 (40%), Gaps = 16/130 (12%)
Query: 593 HSSIKRYMCDICGKQFTTLSYLDLHRKSHNETVKRKEEDKKYECDSCNKKFWSKRALSEH 652
S C C K+F + YL +H + H +K +EC C K ++ K L EH
Sbjct: 2 SSGSSGVECPTCHKKFLSKYYLKVHNRKHT-------GEKPFECPKCGKCYFRKENLLEH 54
Query: 653 M---IIHTGIKEHQCHVCNTAFYHIRSLSRHLKIH--EYNESKMYKCPVCSKMFTELYEM 707
++ + C VC F L H+ H E YKC CS+ F + ++
Sbjct: 55 EARNCMNRSEQVFTCSVCQETFRRRMELRLHMVSHTGE----MPYKCSSCSQQFMQKKDL 110
Query: 708 KRHRDHKHGG 717
+ H H G
Sbjct: 111 QSHMIKLHSG 120
Score = 66.8 bits (164), Expect = 5e-13
Identities = 32/89 (35%), Positives = 41/89 (46%), Gaps = 8/89 (8%)
Query: 1946 GDKCHVCKVCGAKI--KGNMKRHMLSHTGEKPFCCDICGK--SLKGNLKAHILRCQ---G 1998
G C C K K +K H HTGEKPF C CGK K NL H R
Sbjct: 4 GSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRS 63
Query: 1999 ERPYKCDVCGSSFKDKKHFSVHIRNH-GE 2026
E+ + C VC +F+ + +H+ +H GE
Sbjct: 64 EQVFTCSVCQETFRRRMELRLHMVSHTGE 92
Score = 65.6 bits (161), Expect = 1e-12
Identities = 32/119 (26%), Positives = 52/119 (43%), Gaps = 14/119 (11%)
Query: 571 QCPICEKIFAAPKQMRMHLRHVHSSIKRYMCDICGKQFTTLSYLDLHRKSHN----ETVK 626
+CP C K F + +++H R H+ K + C CGK + L H + E
Sbjct: 9 ECPTCHKKFLSKYYLKVHNR-KHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSE--- 64
Query: 627 RKEEDKKYECDSCNKKFWSKRALSEHMIIHTGIKEHQCHVCNTAFYHIRSLSRH-LKIH 684
+ + C C + F + L HM+ HTG ++C C+ F + L H +K+H
Sbjct: 65 -----QVFTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLH 118
Score = 65.6 bits (161), Expect = 1e-12
Identities = 36/123 (29%), Positives = 48/123 (39%), Gaps = 15/123 (12%)
Query: 1914 GEIPLEDTYLCDLCSKVFLEHKDMIRHREWVH-GDKCHVCKVCGA--KIKGNMKRHM--- 1967
G C C K FL + H H G+K C CG K N+ H
Sbjct: 4 GSSG----VECPTCHKKFLSKYYLKVHNR-KHTGEKPFECPKCGKCYFRKENLLEHEARN 58
Query: 1968 LSHTGEKPFCCDICGK--SLKGNLKAHILRCQGERPYKCDVCGSSFKDKKHFSVH-IRNH 2024
+ E+ F C +C + + L+ H++ GE PYKC C F KK H I+ H
Sbjct: 59 CMNRSEQVFTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLH 118
Query: 2025 -GE 2026
G
Sbjct: 119 SGP 121
Score = 58.7 bits (143), Expect = 3e-10
Identities = 33/114 (28%), Positives = 61/114 (53%), Gaps = 14/114 (12%)
Query: 1889 CPICKKGFIALKHMKTHLKKHMWKAGEIPLEDTYLCDLCSKVFLEHKDMIRH--REWVH- 1945
CP C K F++ ++K H +KH GE P + C C K + ++++ H R ++
Sbjct: 10 CPTCHKKFLSKYYLKVHNRKH---TGEKP----FECPKCGKCYFRKENLLEHEARNCMNR 62
Query: 1946 GDKCHVCKVCGA--KIKGNMKRHMLSHTGEKPFCCDICGK--SLKGNLKAHILR 1995
++ C VC + + ++ HM+SHTGE P+ C C + K +L++H+++
Sbjct: 63 SEQVFTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIK 116
Score = 58.7 bits (143), Expect = 4e-10
Identities = 29/101 (28%), Positives = 44/101 (43%), Gaps = 11/101 (10%)
Query: 632 KKYECDSCNKKFWSKRALSEHMIIHTGIKEHQCHVCNTAFYHIRSLSRH---LKIH--EY 686
EC +C+KKF SK L H HTG K +C C ++ +L H ++ E
Sbjct: 6 SGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSE- 64
Query: 687 NESKMYKCPVCSKMFTELYEMKRH-RDHKHGGKCHVCKICG 726
+++ C VC + F E++ H H G + C C
Sbjct: 65 ---QVFTCSVCQETFRRRMELRLHMVSHT-GEMPYKCSSCS 101
Score = 54.8 bits (133), Expect = 7e-09
Identities = 16/58 (27%), Positives = 25/58 (43%), Gaps = 2/58 (3%)
Query: 1970 HTGEKPFCCDICGK--SLKGNLKAHILRCQGERPYKCDVCGSSFKDKKHFSVHIRNHG 2025
+G C C K K LK H + GE+P++C CG + K++ H +
Sbjct: 2 SSGSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNC 59
Score = 54.4 bits (132), Expect = 1e-08
Identities = 31/107 (28%), Positives = 49/107 (45%), Gaps = 3/107 (2%)
Query: 370 QCPLCTKIFTTAKHMRVHLRSVHNGKERKFICDICGKQFTSNIHASRHKNYAHSRDRQK- 428
+CP C K F + +++VH R H G E+ F C CGK + + H+ ++
Sbjct: 9 ECPTCHKKFLSKYYLKVHNR-KHTG-EKPFECPKCGKCYFRKENLLEHEARNCMNRSEQV 66
Query: 429 MECDYCKRKFTCKRYLAEHINAHTGNTIYGCRICKKTFLYTNGLRRH 475
C C+ F + L H+ +HTG Y C C + F+ L+ H
Sbjct: 67 FTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSH 113
Score = 54.0 bits (131), Expect = 1e-08
Identities = 28/91 (30%), Positives = 41/91 (45%), Gaps = 11/91 (12%)
Query: 1320 HTSQKRYLCDICGKQFTSTNRVNIHKACVHSSTGNK-FECIYCKKKYRRKFDLKEH---I 1375
+ C C K+F S + +H H TG K FEC C K Y RK +L EH
Sbjct: 2 SSGSSGVECPTCHKKFLSKYYLKVHNR-KH--TGEKPFECPKCGKCYFRKENLLEHEARN 58
Query: 1376 NKHTGNKPYHCQICKESFYTLKTYRGDLKRH 1406
+ + + C +C+E+F R +L+ H
Sbjct: 59 CMNRSEQVFTCSVCQETF----RRRMELRLH 85
Score = 52.5 bits (127), Expect = 4e-08
Identities = 36/154 (23%), Positives = 57/154 (37%), Gaps = 39/154 (25%)
Query: 1352 TGNK-FECIYCKKKYRRKFDLKEHINKHTGNKPYHCQICKESFYTLKTYRGDLKRHEQLA 1410
+G+ EC C KK+ K+ LK H KHTG KP+ C C + + + +L H
Sbjct: 3 SGSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCY----FRKENLLEH---- 54
Query: 1411 EQSDEMHSTSKFQNKIKKPLDTGDLSWEEWNELVLSGTK--KCPVCHKTYSTPRQMRIHL 1468
E + M+ + C VC +T+ ++R+H+
Sbjct: 55 EARNCMN----------------------------RSEQVFTCSVCQETFRRRMELRLHM 86
Query: 1469 REAHSQKKYACDVCGKQFTSTNRVSQHKAHSHFG 1502
+ Y C C +QF + H H G
Sbjct: 87 VSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHSG 120
Score = 51.4 bits (124), Expect = 1e-07
Identities = 33/156 (21%), Positives = 50/156 (32%), Gaps = 45/156 (28%)
Query: 656 HTGIKEHQCHVCNTAFYHIRSLSRHLKIH--EYNESKMYKCPVCSKMFTELYEMKRH-RD 712
+G +C C+ F L H + H E K ++CP C K + + H
Sbjct: 2 SSGSSGVECPTCHKKFLSKYYLKVHNRKHTGE----KPFECPKCGKCYFRKENLLEHEAR 57
Query: 713 HK-HGGKCHVCKICGATIKLFTELEEKEDSSFERKKSKDSFHCDTCGKYFRSRQICNKHI 771
+ + E+ F C C + FR R H
Sbjct: 58 NCMNRS-------------------EQ------------VFTCSVCQETFRRRMELRLH- 85
Query: 772 KRVHLNPT--KTFKCDLCSDRFSTSAKLKKHVDKIH 805
H T +KC CS +F L+ H+ K+H
Sbjct: 86 MVSH---TGEMPYKCSSCSQQFMQKKDLQSHMIKLH 118
Score = 47.9 bits (115), Expect = 2e-06
Identities = 28/149 (18%), Positives = 50/149 (33%), Gaps = 39/149 (26%)
Query: 1533 HTGNKPYQCQICNKSFGTRRNYRLHLKRHKRSAGQLKPEDIHECKICHKIFLENSRLTRH 1592
+G+ +C C+K F + +LK H R KP EC C K + L H
Sbjct: 2 SSGSSGVECPTCHKKF----LSKYYLKVHNRKHTGEKP---FECPKCGKCYFRKENLLEH 54
Query: 1593 M--NFTH-GDK---CHGATNSTDKIFRDADS-IVHPNSTVWAKRLITELKEDEYSSLKRA 1645
N + ++ C + + FR +H T
Sbjct: 55 EARNCMNRSEQVFTC----SVCQETFRRRMELRLH-------MVSHTGEM---------- 93
Query: 1646 ISKGSFKCGICGKCYKTREKCRRHIKRIH 1674
+KC C + + ++ + H+ ++H
Sbjct: 94 ----PYKCSSCSQQFMQKKDLQSHMIKLH 118
Score = 47.5 bits (114), Expect = 3e-06
Identities = 32/148 (21%), Positives = 49/148 (33%), Gaps = 41/148 (27%)
Query: 752 FHCDTCGKYFRSRQICNKHIKRVHLNPT--KTFKCDLCSDRFSTSAKLKKH--VDKIHFT 807
C TC K F S+ H R H T K F+C C + L +H + ++
Sbjct: 8 VECPTCHKKFLSKYYLKVH-NRKH---TGEKPFECPKCGKCYFRKENLLEHEARNCMN-- 61
Query: 808 PEFQEPSKKNEPLDTGD--YTLEQWNELVTAQSKDCPVCHKTYSTPKSMRKHLREVHSSQ 865
+ +T C VC +T+ +R H+ H+ +
Sbjct: 62 --------------RSEQVFT--------------CSVCQETFRRRMELRLHMV-SHTGE 92
Query: 866 KKYVCDMCGKQFTSNNRVSQHKAYSHFG 893
Y C C +QF + H H G
Sbjct: 93 MPYKCSSCSQQFMQKKDLQSHMIKLHSG 120
Score = 41.0 bits (97), Expect = 4e-04
Identities = 29/119 (24%), Positives = 51/119 (42%), Gaps = 9/119 (7%)
Query: 1860 ECDYCSRKFPSKNEVTNHIKSHMGVRDILCPICKKGFIALKHMKTHLKKHMWKAGEIPLE 1919
EC C +KF SK + H + H G + CP C K + +++ H ++ E
Sbjct: 9 ECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQV-- 66
Query: 1920 DTYLCDLCSKVFLEHKDMIRHREWVH-GDKCHVCKVCGA--KIKGNMKRHML-SHTGEK 1974
+ C +C + F ++ H H G+ + C C K +++ HM+ H+G
Sbjct: 67 --FTCSVCQETFRRRMELRLHMV-SHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHSGPS 122
Score = 40.6 bits (96), Expect = 6e-04
Identities = 22/94 (23%), Positives = 34/94 (36%), Gaps = 20/94 (21%)
Query: 392 HNGKERKFICDICGKQFTSNIHASRH-------KNYAHSRDRQKMECDYCKRKFTCKRYL 444
+G C C K+F S + H K + EC C + + K L
Sbjct: 2 SSG-SSGVECPTCHKKFLSKYYLKVHNRKHTGEKPF---------ECPKCGKCYFRKENL 51
Query: 445 AEH---INAHTGNTIYGCRICKKTFLYTNGLRRH 475
EH + ++ C +C++TF LR H
Sbjct: 52 LEHEARNCMNRSEQVFTCSVCQETFRRRMELRLH 85
Score = 37.9 bits (89), Expect = 0.006
Identities = 16/57 (28%), Positives = 25/57 (43%), Gaps = 3/57 (5%)
Query: 1299 CPVCHKTYSTPKTMRRHLRQVHTSQKRYLCDICGKQFTSTNRVNIHKACVHSSTGNK 1355
C VC +T+ +R H+ HT + Y C C +QF + H +H +G
Sbjct: 69 CSVCQETFRRRMELRLHMV-SHTGEMPYKCSSCSQQFMQKKDLQSHMIKLH--SGPS 122
Score = 36.7 bits (86), Expect = 0.015
Identities = 30/140 (21%), Positives = 45/140 (32%), Gaps = 26/140 (18%)
Query: 284 KMFKCDICVASFLTPHKLKTHIKTKHRTQLKELYTFECQHCEDKFSTPFELNKHNESKHE 343
+C C FL+ + LK H +R E FEC C + L +H
Sbjct: 6 SGVECPTCHKKFLSKYYLKVH----NRKHTGE-KPFECPKCGKCYFRKENLLEHE----- 55
Query: 344 KGRKLNPETGGYTYEEYKEVVVSKSKQCPLCTKIFTTAKHMRVHLRSVHNGKERKFICDI 403
+ + C +C + F +R+H+ H G E + C
Sbjct: 56 --ARNCMNRSEQVFT------------CSVCQETFRRRMELRLHMV-SHTG-EMPYKCSS 99
Query: 404 CGKQFTSNIHASRHKNYAHS 423
C +QF H HS
Sbjct: 100 CSQQFMQKKDLQSHMIKLHS 119
Score = 31.3 bits (72), Expect = 1.0
Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Query: 1798 CPVCNKEYATPVTMRKHLREVHVSKKKFKCDLCQKQFKASRSLQCHKQFVHLG 1850
C VC + + + +R H+ H + +KC C +QF + LQ H +H G
Sbjct: 69 CSVCQETFRRRMELRLHMV-SHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHSG 120
>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the
cerebellum 3, disease mutation, DNA-binding,
metal-binding, nucleus, polymorphism; NMR {Homo sapiens}
Length = 155
Score = 106 bits (267), Expect = 1e-26
Identities = 45/211 (21%), Positives = 58/211 (27%), Gaps = 65/211 (30%)
Query: 873 CGKQFTSNNRVSQHKAYSHFGIIKTIERKFECDYCKMKFKSKSFLSEHINTHTGNKPYQC 932
G + K I + C F + L H+ P Q
Sbjct: 3 SGSSGQPIKQELSCK------WIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQN 56
Query: 933 QICKKSFANKRSYQRDLKRHKQLAGQLKPEDIHECKICHKTFLEKGSLAKHMNWVHGDKC 992
EC K+F
Sbjct: 57 NHVCYW--------------------------EECPREGKSF------------------ 72
Query: 993 HICKVCGAKIKGNLQKHMLSHTGEKPFCCHI--CGK--SLKGNLKDHILKCHTGERPYKC 1048
K K L H+ HTGEKPF C CGK + NLK H + HTGE+P+KC
Sbjct: 73 --------KAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIH-KRTHTGEKPFKC 123
Query: 1049 DV--CGSSFKDKWYLGVHMRKHNGEKPYNCD 1077
+ C F + HM H +K
Sbjct: 124 EFEGCDRRFANSSDRKKHMHVHTSDKSGPSS 154
Score = 92.3 bits (230), Expect = 1e-21
Identities = 38/145 (26%), Positives = 54/145 (37%), Gaps = 25/145 (17%)
Query: 972 KTFLEKGSLAKHMN--WVH-GDKCHICKVCGA--KIKGNLQKHMLSHTGEKPFC------ 1020
+ + + ++ W+ K C L H+ P
Sbjct: 2 SSGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCY 61
Query: 1021 ---CHICGK--SLKGNLKDHILKCHTGERPYKCDV--CGSSFKDKWYLGVHMRKHNGEKP 1073
C GK K L +HI + HTGE+P+ C CG F L +H R H GEKP
Sbjct: 62 WEECPREGKSFKAKYKLVNHI-RVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKP 120
Query: 1074 YNCDY--CGQTFAARSTFTFHLKKH 1096
+ C++ C + FA S KKH
Sbjct: 121 FKCEFEGCDRRFANSS----DRKKH 141
Score = 71.5 bits (176), Expect = 3e-14
Identities = 37/152 (24%), Positives = 54/152 (35%), Gaps = 21/152 (13%)
Query: 1894 KGFIALKHMKTHLKKHMWKAGEIPLEDTYLCDLCSKVFLEHKDMIRHREWVHGDK----- 1948
+ + +K L ++ C + F +++ H H
Sbjct: 2 SSGSSGQPIKQELSCKWIDEAQLS----RPKKSCDRTFSTMHELVTHVTMEHVGGPEQNN 57
Query: 1949 ----CHVCKVCGA--KIKGNMKRHMLSHTGEKPFCCDI--CGK--SLKGNLKAHILRCQG 1998
C G K K + H+ HTGEKPF C CGK + NLK H G
Sbjct: 58 HVCYWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTG 117
Query: 1999 ERPYKCDV--CGSSFKDKKHFSVHIRNHGEDK 2028
E+P+KC+ C F + H+ H DK
Sbjct: 118 EKPFKCEFEGCDRRFANSSDRKKHMHVHTSDK 149
Score = 70.0 bits (172), Expect = 7e-14
Identities = 40/155 (25%), Positives = 58/155 (37%), Gaps = 16/155 (10%)
Query: 1454 CHKTYSTPRQMRIHLREAHSQKKYACDVCGKQFTSTNRVSQHKAHSHFG---IIKTIQRK 1510
+ +Q +Q C + F++ + + H H G +
Sbjct: 3 SGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYW 62
Query: 1511 FECDFCKKKFYRNFDLQEHINTHTGNKPYQCQI--CNKSFGTRRNYRLHLKRHKRSAGQL 1568
EC K F + L HI HTG KP+ C C K F N LK HKR+
Sbjct: 63 EECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSEN----LKIHKRTHTGE 118
Query: 1569 KPEDIHECKI--CHKIFLENSRLTRHMNFTH-GDK 1600
KP +C+ C + F +S +HM+ H DK
Sbjct: 119 KP---FKCEFEGCDRRFANSSDRKKHMH-VHTSDK 149
Score = 69.6 bits (171), Expect = 1e-13
Identities = 32/146 (21%), Positives = 52/146 (35%), Gaps = 18/146 (12%)
Query: 577 KIFAAPKQMRMHLRH--VHSSIKRYMCDICGKQFTTLSYLDLHRKSHNETV----KRKEE 630
++ + ++ L + + C + F+T+ L H V +
Sbjct: 2 SSGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTME--HVGGPEQNNHV 59
Query: 631 DKKYECDSCNKKFWSKRALSEHMIIHTGIKEHQCHV--CNTAFYHIRSLSRHLKIH--EY 686
EC K F +K L H+ +HTG K C C F +L H + H E
Sbjct: 60 CYWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGE- 118
Query: 687 NESKMYKCPV--CSKMFTELYEMKRH 710
K +KC C + F + K+H
Sbjct: 119 ---KPFKCEFEGCDRRFANSSDRKKH 141
Score = 65.4 bits (160), Expect = 3e-12
Identities = 38/183 (20%), Positives = 66/183 (36%), Gaps = 38/183 (20%)
Query: 758 GKYFRSRQICNKHI--KRVHLNPTKTFKCDLCSDRFSTSAKLKKHVDKIHFTPEFQEPSK 815
G S Q + + K + + C FST +L HV +
Sbjct: 1 GSSGSSGQPIKQELSCKWIDEAQ-LSRPKKSCDRTFSTMHELVTHV-TME---------- 48
Query: 816 KNEPLDTGD--YTLEQWNELVTAQSKDCPVCHKTYSTPKSMRKHLREVHSSQKKYVCDM- 872
++CP K++ + H+R VH+ +K + C
Sbjct: 49 ------HVGGPEQNNH-----VCYWEECPREGKSFKAKYKLVNHIR-VHTGEKPFPCPFP 96
Query: 873 -CGKQFTSNNRVSQHKAYSHFGIIKTIERKFECDY--CKMKFKSKSFLSEHINTHTGNKP 929
CGK F + + HK +H G E+ F+C++ C +F + S +H++ HT +K
Sbjct: 97 GCGKIFARSENLKIHKR-THTG-----EKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKS 150
Query: 930 YQC 932
Sbjct: 151 GPS 153
Score = 63.8 bits (156), Expect = 9e-12
Identities = 32/157 (20%), Positives = 54/157 (34%), Gaps = 20/157 (12%)
Query: 1864 CSRKFPSKNEVTNHIKSHMGVRDILCPICKKGFIALKHMKTHLKKHMWKAGEIPLEDTYL 1923
+ + C + F + + TH+ P ++ ++
Sbjct: 3 SGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTME---HVGGPEQNNHV 59
Query: 1924 -----CDLCSKVFLEHKDMIRHREWVH-GDKCHVCKV--CGAKI---KGNMKRHMLSHTG 1972
C K F ++ H VH G+K C CG KI N+K H +HTG
Sbjct: 60 CYWEECPREGKSFKAKYKLVNHIR-VHTGEKPFPCPFPGCG-KIFARSENLKIHKRTHTG 117
Query: 1973 EKPFCCDI--CGK--SLKGNLKAHILRCQGERPYKCD 2005
EKPF C+ C + + + K H+ ++
Sbjct: 118 EKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKSGPSS 154
Score = 60.0 bits (146), Expect = 2e-10
Identities = 32/127 (25%), Positives = 52/127 (40%), Gaps = 23/127 (18%)
Query: 1450 KCPVCHKTYSTPRQMRIHLREAHSQKKYA---------CDVCGKQFTSTNRVSQHKAHSH 1500
C +T+ST ++ H+ H C GK F + ++ H
Sbjct: 27 PKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHI---- 82
Query: 1501 FGIIKTIQRKFECDF--CKKKFYRNFDLQEHINTHTGNKPYQCQI--CNKSFGTRRNYRL 1556
+ T ++ F C F C K F R+ +L+ H THTG KP++C+ C++ F
Sbjct: 83 --RVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRF----ANSS 136
Query: 1557 HLKRHKR 1563
K+H
Sbjct: 137 DRKKHMH 143
Score = 58.8 bits (143), Expect = 5e-10
Identities = 29/104 (27%), Positives = 49/104 (47%), Gaps = 9/104 (8%)
Query: 1288 YNKIVASGSKDCPVCHKTYSTPKTMRRHLRQVHTSQKRYLCDI--CGKQFTSTNRVNIHK 1345
++CP K++ + H+R VHT +K + C CGK F + + IHK
Sbjct: 54 EQNNHVCYWEECPREGKSFKAKYKLVNHIR-VHTGEKPFPCPFPGCGKIFARSENLKIHK 112
Query: 1346 ACVHSSTGNK-FECIY--CKKKYRRKFDLKEHINKHTGNKPYHC 1386
+ TG K F+C + C +++ D K+H++ HT +K
Sbjct: 113 ---RTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKSGPS 153
Score = 58.8 bits (143), Expect = 5e-10
Identities = 39/164 (23%), Positives = 65/164 (39%), Gaps = 41/164 (25%)
Query: 505 KCRYCARTFSTQNDLKEHVSSVHMFMTESFENPNEPRVLNSNRYPLAIDGGLSLEEYQQI 564
+ C RTFST ++L HV+ H+ P Q
Sbjct: 27 PKKSCDRTFSTMHELVTHVTMEHV------GGP-----------------------EQNN 57
Query: 565 VATKSKQCPICEKIFAAPKQMRMHLRHVHSSIKRYMCDI--CGKQFTTLSYLDLHRKSHN 622
++CP K F A ++ H+R VH+ K + C CGK F L +H+++H
Sbjct: 58 HVCYWEECPREGKSFKAKYKLVNHIR-VHTGEKPFPCPFPGCGKIFARSENLKIHKRTHT 116
Query: 623 ETVKRKEEDKKYECDS--CNKKFWSKRALSEHMIIHTGIKEHQC 664
+K ++C+ C+++F + +HM +HT K
Sbjct: 117 G-------EKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKSGPS 153
Score = 57.3 bits (139), Expect = 2e-09
Identities = 34/169 (20%), Positives = 65/169 (38%), Gaps = 40/169 (23%)
Query: 1378 HTGNKPYHCQICKESFYTLKTYRGDLKRHEQLAEQSDEMHSTSKFQNKIKKPLDTGDLSW 1437
+ C +F T+ +L H M + P + +
Sbjct: 20 DEAQLSRPKKSCDRTFSTM----HELVTHV-------TMEH-------VGGPEQNNHVCY 61
Query: 1438 EEWNELVLSGTKKCPVCHKTYSTPRQMRIHLREAHSQKK-YACDV--CGKQFTSTNRVSQ 1494
E +CP K++ ++ H+R H+ +K + C CGK F + +
Sbjct: 62 WE----------ECPREGKSFKAKYKLVNHIR-VHTGEKPFPCPFPGCGKIFARSENLKI 110
Query: 1495 HKAHSHFGIIKTIQRKFECDF--CKKKFYRNFDLQEHINTHTGNKPYQC 1541
HK +H G ++ F+C+F C ++F + D ++H++ HT +K
Sbjct: 111 HK-RTHTG-----EKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKSGPS 153
Score = 55.8 bits (135), Expect = 8e-09
Identities = 34/122 (27%), Positives = 48/122 (39%), Gaps = 22/122 (18%)
Query: 1299 CPVCHKTYSTPKTMRRHLRQVHTSQKRY---------LCDICGKQFTSTNRVNIHKACVH 1349
C +T+ST + H+ + C GK F + ++ H VH
Sbjct: 28 KKSCDRTFSTMHELVTHVT-MEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIR-VH 85
Query: 1350 SSTGNK-FECIY--CKKKYRRKFDLKEHINKHTGNKPYHCQI--CKESFYTLKTYRGDLK 1404
TG K F C + C K + R +LK H HTG KP+ C+ C F D K
Sbjct: 86 --TGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRF----ANSSDRK 139
Query: 1405 RH 1406
+H
Sbjct: 140 KH 141
Score = 54.2 bits (131), Expect = 2e-08
Identities = 30/140 (21%), Positives = 47/140 (33%), Gaps = 23/140 (16%)
Query: 568 KSKQCPICEKIFAAPKQMRMHLRHVH--------SSIKRYMCDICGKQFTTLSYLDLHRK 619
S+ C++ F+ ++ H+ H C GK F L H +
Sbjct: 24 LSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIR 83
Query: 620 SH-NETVKRKEEDKKYECDS--CNKKFWSKRALSEHMIIHTGIKEHQCHV--CNTAFYHI 674
H E K + C C K F L H HTG K +C C+ F +
Sbjct: 84 VHTGE--------KPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANS 135
Query: 675 RSLSRHLKIHEYNESKMYKC 694
+H+ +H ++ K
Sbjct: 136 SDRKKHMHVH-TSD-KSGPS 153
Score = 53.8 bits (130), Expect = 3e-08
Identities = 24/114 (21%), Positives = 39/114 (34%), Gaps = 14/114 (12%)
Query: 1302 CHKTYSTPKTMRRHLRQVHTSQKRYLCDICGKQFTSTNRVNIHKACVH-------SSTGN 1354
+ K + +Q C + F++ + + H H +
Sbjct: 3 SGSSGQPIKQELSCKW-IDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCY 61
Query: 1355 KFECIYCKKKYRRKFDLKEHINKHTGNKPYHCQI--CKESFYTLKTYRGDLKRH 1406
EC K ++ K+ L HI HTG KP+ C C + F +LK H
Sbjct: 62 WEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIF----ARSENLKIH 111
Score = 53.1 bits (128), Expect = 6e-08
Identities = 38/175 (21%), Positives = 54/175 (30%), Gaps = 50/175 (28%)
Query: 641 KKFWSKRALSEHMI---IHTGIKEHQCHVCNTAFYHIRSLSRHLKIH-------EYNESK 690
S + + + + I C+ F + L H+ + +
Sbjct: 2 SSGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCY 61
Query: 691 MYKCPVCSKMFTELYEMKRH-RDHKHGGKCHVCKICGATIKLFTELEEKEDSSFERKKSK 749
+CP K F Y++ H R H G K C G
Sbjct: 62 WEECPREGKSFKAKYKLVNHIRVHT-GEKPFPCPFPG----------------------- 97
Query: 750 DSFHCDTCGKYFRSRQICNKHIKRVHLNPT--KTFKCDL--CSDRFSTSAKLKKH 800
CGK F + H KR H T K FKC+ C RF+ S+ KKH
Sbjct: 98 -------CGKIFARSENLKIH-KRTH---TGEKPFKCEFEGCDRRFANSSDRKKH 141
Score = 52.3 bits (126), Expect = 1e-07
Identities = 22/121 (18%), Positives = 37/121 (30%), Gaps = 24/121 (19%)
Query: 604 CGKQFTTLSYLDLHRKSHNETVKRKEEDKKYECDSCNKKFWSKRALSEHMIIHTGIKEHQ 663
G + + E SC++ F + L H+ + Q
Sbjct: 3 SGSSGQPIKQELSCKWID-------EAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQ 55
Query: 664 ---------CHVCNTAFYHIRSLSRHLKIH--EYNESKMYKCPV--CSKMFTELYEMKRH 710
C +F L H+++H E K + CP C K+F +K H
Sbjct: 56 NNHVCYWEECPREGKSFKAKYKLVNHIRVHTGE----KPFPCPFPGCGKIFARSENLKIH 111
Query: 711 R 711
+
Sbjct: 112 K 112
Score = 48.4 bits (116), Expect = 2e-06
Identities = 39/213 (18%), Positives = 62/213 (29%), Gaps = 69/213 (32%)
Query: 667 CNTAFYHIRSLSRHLKIHEYNESKMYKCPVCSKMFTELYEMKRHRDHKHGGKCHVCKICG 726
++ I+ I E C + F+ ++E+ H +H G
Sbjct: 3 SGSSGQPIKQELSCKWIDE--AQLSRPKKSCDRTFSTMHELVTHVTMEHVGG-------- 52
Query: 727 ATIKLFTELEEKEDSSFERKKSKDSFHCDTCGKYFRSRQICNKHIKRVHLNPT--KTFKC 784
+ C GK F+++ HI RVH T K F C
Sbjct: 53 ---------------PEQNNHVCYWEECPREGKSFKAKYKLVNHI-RVH---TGEKPFPC 93
Query: 785 DL--CSDRFSTSAKLKKHVDKIHFTPEFQEPSKKNEPLDTGD--YTLEQWNELVTAQSKD 840
C F+ S LK H + H TG+ +
Sbjct: 94 PFPGCGKIFARSENLKIHK-RTH----------------TGEKPFK-------------- 122
Query: 841 CPV--CHKTYSTPKSMRKHLREVHSSQKKYVCD 871
C C + ++ +KH+ VH+S K
Sbjct: 123 CEFEGCDRRFANSSDRKKHMH-VHTSDKSGPSS 154
Score = 47.7 bits (114), Expect = 5e-06
Identities = 36/178 (20%), Positives = 61/178 (34%), Gaps = 39/178 (21%)
Query: 294 SFLTPHKLKTHIKTKHRTQLKELYTFECQHCEDKFSTPFELNKHNESKH-EKGRKLNPET 352
S + +K + + + + C+ FST EL H +H
Sbjct: 3 SGSSGQPIKQELSC-KWIDEAQ-LSRPKKSCDRTFSTMHELVTHVTMEHVGG-------- 52
Query: 353 GGYTYEEYKEVVVSKSKQCPLCTKIFTTAKHMRVHLRSVHNGKERKFICDI--CGKQFTS 410
+ V ++CP K F + H+R VH G E+ F C CGK F
Sbjct: 53 ------PEQNNHVCYWEECPREGKSFKAKYKLVNHIR-VHTG-EKPFPCPFPGCGKIFAR 104
Query: 411 NIHASRH-------KNYAHSRDRQKMECDY--CKRKFTCKRYLAEHINAHTGNTIYGC 459
+ + H K + +C++ C R+F +H++ HT +
Sbjct: 105 SENLKIHKRTHTGEKPF---------KCEFEGCDRRFANSSDRKKHMHVHTSDKSGPS 153
Score = 45.7 bits (109), Expect = 2e-05
Identities = 20/111 (18%), Positives = 31/111 (27%), Gaps = 11/111 (9%)
Query: 374 CTKIFTTAKHMRVHLRSVHNGKERKFICDICGKQFTSNIHASRH-------KNYAHSRDR 426
K + + C + F++ H ++
Sbjct: 3 SGSSGQPIKQELSCKW-IDEA-QLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVC 60
Query: 427 QKMECDYCKRKFTCKRYLAEHINAHTGNTIYGCRI--CKKTFLYTNGLRRH 475
EC + F K L HI HTG + C C K F + L+ H
Sbjct: 61 YWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIH 111
Score = 45.0 bits (107), Expect = 4e-05
Identities = 35/191 (18%), Positives = 63/191 (32%), Gaps = 63/191 (32%)
Query: 1793 EKTKLCPVCNKEYATPVTMRKHLREVHVSKKKFKCDLCQKQFKASRSLQCHKQFVHLGVH 1852
+ ++ C++ ++T + H+ HV + +C +
Sbjct: 23 QLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWE------------------- 63
Query: 1853 KPKFLNMECDYCSRKFPSKNEVTNHIKSHMGVRDILCPI--CKKGFIALKHMKTHLKKHM 1910
EC + F +K ++ NHI+ H G + CP C K F +++K H + H
Sbjct: 64 -------ECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTH- 115
Query: 1911 WKAGEIPLEDTYLCDL--CSKVFLEHKDMIRHREWVHGDKCHVCKVCGAKIKGNMKRHML 1968
GE P + C+ C + F + K+HM
Sbjct: 116 --TGEKP----FKCEFEGCDRRFAN--------------------------SSDRKKHMH 143
Query: 1969 SHTGEKPFCCD 1979
HT +K
Sbjct: 144 VHTSDKSGPSS 154
Score = 38.4 bits (90), Expect = 0.007
Identities = 35/166 (21%), Positives = 58/166 (34%), Gaps = 34/166 (20%)
Query: 261 CDKPFDTIEKCRRHAIRMHMNPCKMFKCDICVASFLTPHKLKTHIKTKH----RTQLKEL 316
I++ + C +F T H+L TH+ +H
Sbjct: 3 SGSSGQPIKQELSCK-WIDEAQ-LSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVC 60
Query: 317 YTFECQHCEDKFSTPFELNKHNESKHEKGRKLNPETGGYTYEEYKEVVVSKSKQCPL--C 374
Y EC F ++L H H TG K CP C
Sbjct: 61 YWEECPREGKSFKAKYKLVNH-IRVH---------TG------------EKPFPCPFPGC 98
Query: 375 TKIFTTAKHMRVHLRSVHNGKERKFICDI--CGKQFTSNIHASRHK 418
KIF ++++++H R+ H G E+ F C+ C ++F ++ +H
Sbjct: 99 GKIFARSENLKIHKRT-HTG-EKPFKCEFEGCDRRFANSSDRKKHM 142
Score = 36.1 bits (84), Expect = 0.036
Identities = 8/48 (16%), Positives = 12/48 (25%), Gaps = 5/48 (10%)
Query: 1982 GKSLK-GNLKAHILRCQ----GERPYKCDVCGSSFKDKKHFSVHIRNH 2024
G S G L C+ + C +F H+
Sbjct: 1 GSSGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTME 48
Score = 35.3 bits (82), Expect = 0.078
Identities = 36/207 (17%), Positives = 60/207 (28%), Gaps = 67/207 (32%)
Query: 435 KRKFTCKRYLAEHINAHTGNTIYGCRICKKTFLYTNGLRRHILSRHKDTDVVILNEVKDI 494
K++ +CK + C +TF + L H+ H V
Sbjct: 11 KQELSCKW-------IDEAQLSRPKKSCDRTFSTMHELVTHVTMEH----------VGGP 53
Query: 495 FPSHLQSYQIKCRYCARTFSTQNDLKEHVSSVHMFMTESFENPNEPRVLNSNRYPLAIDG 554
++ Y +C ++F + L H+ + E P
Sbjct: 54 EQNNHVCYWEECPREGKSFKAKYKLVNHI------RVHTGEKPFP--------------- 92
Query: 555 GLSLEEYQQIVATKSKQCPI--CEKIFAAPKQMRMHLRHVHSSIKRYMCDI--CGKQFTT 610
CP C KIFA + +++H R H+ K + C+ C ++F
Sbjct: 93 -----------------CPFPGCGKIFARSENLKIHKR-THTGEKPFKCEFEGCDRRFAN 134
Query: 611 LSYLDLHRKSHNETVKRKEEDKKYECD 637
S H H DK
Sbjct: 135 SSDRKKHMHVHT-------SDKSGPSS 154
Score = 33.8 bits (78), Expect = 0.22
Identities = 15/74 (20%), Positives = 26/74 (35%), Gaps = 6/74 (8%)
Query: 108 CTEVFENLTLLRRHMRVKHPGEQNLPCRLCDMSFSNKYQKKKHYSAFHKGMPFIPSFT-- 165
+ + + + + P + CD +FS ++ H + H G P +
Sbjct: 3 SGSSGQPIKQELSCKWI-DEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCY 61
Query: 166 ---CPICQKIFKNK 176
CP K FK K
Sbjct: 62 WEECPREGKSFKAK 75
Score = 31.5 bits (72), Expect = 1.5
Identities = 13/82 (15%), Positives = 18/82 (21%), Gaps = 11/82 (13%)
Query: 404 CGKQFTSNIHASRHKNYAHSRDRQKMECDYCKRKFTCKRYLAEHINAHTGNTIY------ 457
G K + + C R F+ L H+
Sbjct: 3 SGSSGQPIKQELSCK-WIDEAQLSR-PKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVC 60
Query: 458 ---GCRICKKTFLYTNGLRRHI 476
C K+F L HI
Sbjct: 61 YWEECPREGKSFKAKYKLVNHI 82
Score = 28.8 bits (65), Expect = 9.8
Identities = 14/60 (23%), Positives = 23/60 (38%), Gaps = 9/60 (15%)
Query: 256 FTCDTCDKPFDTIEKCRRHAIRMH--------MNPCKMFKCDICVASFLTPHKLKTHIKT 307
+CD+ F T+ + H + M + C +C SF +KL HI+
Sbjct: 26 RPKKSCDRTFSTMHELVTH-VTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRV 84
>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA
complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1
g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Length = 155
Score = 106 bits (267), Expect = 1e-26
Identities = 47/150 (31%), Positives = 63/150 (42%), Gaps = 20/150 (13%)
Query: 966 ECKICHKTFLEKGSLAKHMNWVH---GDKCHICKVCGAKI-------KGNLQKHMLSHTG 1015
C + F + L H+N H K +C G + L HM HTG
Sbjct: 5 RWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTG 64
Query: 1016 EKPFCCHI--CGK--SLKGNLKDHILKCHTGERPYKC--DVCGSSFKDKWYLGVHM-RKH 1068
EKP C C K S NLK H+ + HTGE+PY C + C +F + H R H
Sbjct: 65 EKPHKCTFEGCRKSYSRLENLKTHL-RSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTH 123
Query: 1069 NGEKPYNCDY--CGQTFAARSTFTFHLKKH 1096
+ EKPY C C + + S+ H+K
Sbjct: 124 SNEKPYVCKLPGCTKRYTDPSSLRKHVKTV 153
Score = 99.2 bits (248), Expect = 5e-24
Identities = 48/186 (25%), Positives = 67/186 (36%), Gaps = 45/186 (24%)
Query: 899 ERKFECDYCKMKFKSKSFLSEHINT---HTGNKPYQCQICKKSFANKRSYQRDLKRHKQL 955
E D C +F S+ L HIN+ H K + C
Sbjct: 1 ETDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWG-------------------- 40
Query: 956 AGQLKPEDIHECKICHKTFLEKGSLAKHMNWVH-GDKCHICKV--CGAKI--KGNLQKHM 1010
C + F + L HM H G+K H C C NL+ H+
Sbjct: 41 ----------GCSRELRPFKAQYMLVVHMR-RHTGEKPHKCTFEGCRKSYSRLENLKTHL 89
Query: 1011 LSHTGEKPFCCH--ICGK--SLKGNLKDHILKCHTGERPYKCDV--CGSSFKDKWYLGVH 1064
SHTGEKP+ C C K S + H + H+ E+PY C + C + D L H
Sbjct: 90 RSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKH 149
Query: 1065 MRKHNG 1070
++ +G
Sbjct: 150 VKTVHG 155
Score = 77.6 bits (192), Expect = 2e-16
Identities = 25/92 (27%), Positives = 39/92 (42%), Gaps = 11/92 (11%)
Query: 1016 EKPFCCHICGK--SLKGNLKDHILKC--HTGERPYKCDVCGS-----SFKDKWYLGVHMR 1066
E C + + L HI H + + C G FK ++ L VHMR
Sbjct: 1 ETDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMR 60
Query: 1067 KHNGEKPYNCDY--CGQTFAARSTFTFHLKKH 1096
+H GEKP+ C + C ++++ HL+ H
Sbjct: 61 RHTGEKPHKCTFEGCRKSYSRLENLKTHLRSH 92
Score = 73.4 bits (181), Expect = 5e-15
Identities = 35/153 (22%), Positives = 56/153 (36%), Gaps = 22/153 (14%)
Query: 1889 CPICKKGFIALKHMKTHLKKHMWKAGEIPLEDTYLCDLC-----SKVFLEHKDMIRHREW 1943
C + F + + + H+ ++C + F ++ H
Sbjct: 6 WDGCSQEFDSQEQLVHHINSEHIHGERKE----FVCHWGGCSRELRPFKAQYMLVVHMR- 60
Query: 1944 VH-GDKCHVCKV--CGAKI--KGNMKRHMLSHTGEKPFCC--DICGK--SLKGNLKAHIL 1994
H G+K H C C N+K H+ SHTGEKP+ C + C K S + H
Sbjct: 61 RHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQN 120
Query: 1995 RC-QGERPYKCDV--CGSSFKDKKHFSVHIRNH 2024
R E+PY C + C + D H++
Sbjct: 121 RTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTV 153
Score = 72.2 bits (178), Expect = 1e-14
Identities = 38/127 (29%), Positives = 51/127 (40%), Gaps = 17/127 (13%)
Query: 1919 EDTYLCDLCSKVFLEHKDMIRHREWVH---GDKCHVCKVCGAKI-------KGNMKRHML 1968
E D CS+ F + ++ H H K VC G + + HM
Sbjct: 1 ETDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMR 60
Query: 1969 SHTGEKPFCCDI--CGK--SLKGNLKAHILRCQGERPYKC--DVCGSSFKDKKHFSVHI- 2021
HTGEKP C C K S NLK H+ GE+PY C + C +F + + H
Sbjct: 61 RHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQN 120
Query: 2022 RNHGEDK 2028
R H +K
Sbjct: 121 RTHSNEK 127
Score = 71.1 bits (175), Expect = 4e-14
Identities = 38/136 (27%), Positives = 57/136 (41%), Gaps = 20/136 (14%)
Query: 1475 KKYACDVCGKQFTSTNRVSQHKAHSHFGIIKTIQRKFECDFC-----KKKFYRNFDLQEH 1529
D C ++F S ++ H H I +++F C + + F + L H
Sbjct: 2 TDCRWDGCSQEFDSQEQLVHHINSEH---IHGERKEFVCHWGGCSRELRPFKAQYMLVVH 58
Query: 1530 INTHTGNKPYQCQI--CNKSFGTRRNYRLHLKRHKRSAGQLKPEDIHECK--ICHKIFLE 1585
+ HTG KP++C C KS+ +LK H RS KP + C+ C K F
Sbjct: 59 MRRHTGEKPHKCTFEGCRKSYSRLE----NLKTHLRSHTGEKP---YMCEHEGCSKAFSN 111
Query: 1586 NSRLTRHMNFTH-GDK 1600
S +H N TH +K
Sbjct: 112 ASDRAKHQNRTHSNEK 127
Score = 69.5 bits (171), Expect = 1e-13
Identities = 40/153 (26%), Positives = 64/153 (41%), Gaps = 25/153 (16%)
Query: 597 KRYMCDICGKQFTTLSYLDLHRKSHNETVKRKEEDKKYECDSCN-----KKFWSKRALSE 651
D C ++F + L H + E K++ C + F ++ L
Sbjct: 2 TDCRWDGCSQEFDSQEQL----VHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVV 57
Query: 652 HMIIHTGIKEHQCHV--CNTAFYHIRSLSRHLKIH--EYNESKMYKC--PVCSKMFTELY 705
HM HTG K H+C C ++ + +L HL+ H E K Y C CSK F+
Sbjct: 58 HMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGE----KPYMCEHEGCSKAFSNAS 113
Query: 706 EMKRHRDHKHGG-KCHVCKI--CGATIKLFTEL 735
+ +H++ H K +VCK+ C K +T+
Sbjct: 114 DRAKHQNRTHSNEKPYVCKLPGCT---KRYTDP 143
Score = 67.6 bits (166), Expect = 5e-13
Identities = 49/189 (25%), Positives = 70/189 (37%), Gaps = 52/189 (27%)
Query: 632 KKYECDSCNKKFWSKRALSEHMI---IHTGIKEHQCHVCNT-----AFYHIRSLSRHLKI 683
D C+++F S+ L H+ IH KE CH F L H++
Sbjct: 2 TDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRR 61
Query: 684 H--EYNESKMYKCPV--CSKMFTELYEMKRH-RDHKHGGKCHVCKICGATIKLFTELEEK 738
H E K +KC C K ++ L +K H R H G K ++C+ G
Sbjct: 62 HTGE----KPHKCTFEGCRKSYSRLENLKTHLRSHT-GEKPYMCEHEG------------ 104
Query: 739 EDSSFERKKSKDSFHCDTCGKYFRSRQICNKHIKRVHLNPTKTFKCDL--CSDRFSTSAK 796
C K F + KH R H N K + C L C+ R++ +
Sbjct: 105 ------------------CSKAFSNASDRAKHQNRTHSN-EKPYVCKLPGCTKRYTDPSS 145
Query: 797 LKKHVDKIH 805
L+KHV K
Sbjct: 146 LRKHV-KTV 153
Score = 65.7 bits (161), Expect = 2e-12
Identities = 36/183 (19%), Positives = 68/183 (37%), Gaps = 43/183 (23%)
Query: 780 KTFKCDLCSDRFSTSAKLKKHVDKIHFTPEFQEPSKKNEPLDTG--DYTLEQWNELVTAQ 837
+ D CS F + +L H++ H + ++
Sbjct: 2 TDCRWDGCSQEFDSQEQLVHHINSEH--------------IHGERKEFVCHW-------- 39
Query: 838 SKDCPVCHKTYSTPKSMRKHLREVHSSQKKYVCDM--CGKQFTSNNRVSQHKAYSHFGII 895
C + + + H+R H+ +K + C C K ++ + H SH G
Sbjct: 40 -GGCSRELRPFKAQYMLVVHMR-RHTGEKPHKCTFEGCRKSYSRLENLKTHLR-SHTG-- 94
Query: 896 KTIERKFECDY--CKMKFKSKSFLSEHIN-THTGNKPYQCQI--CKKSFANKRSYQRDLK 950
E+ + C++ C F + S ++H N TH+ KPY C++ C K + + L+
Sbjct: 95 ---EKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRY----TDPSSLR 147
Query: 951 RHK 953
+H
Sbjct: 148 KHV 150
Score = 63.0 bits (154), Expect = 2e-11
Identities = 39/155 (25%), Positives = 67/155 (43%), Gaps = 25/155 (16%)
Query: 571 QCPICEKIFAAPKQMRMHLR--HVHSSIKRYMCDICG-----KQFTTLSYLDLHRKSH-N 622
+ C + F + +Q+ H+ H+H K ++C G + F L +H + H
Sbjct: 5 RWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTG 64
Query: 623 ETVKRKEEDKKYECDS--CNKKFWSKRALSEHMIIHTGIKEHQCH--VCNTAFYHIRSLS 678
E K ++C C K + L H+ HTG K + C C+ AF + +
Sbjct: 65 E--------KPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRA 116
Query: 679 RHLK-IHEYNESKMYKCPV--CSKMFTELYEMKRH 710
+H H NE K Y C + C+K +T+ +++H
Sbjct: 117 KHQNRTH-SNE-KPYVCKLPGCTKRYTDPSSLRKH 149
Score = 61.8 bits (151), Expect = 6e-11
Identities = 38/188 (20%), Positives = 65/188 (34%), Gaps = 47/188 (25%)
Query: 505 KCRYCARTFSTQNDLKEHVSSVHMFMTESFENPNEPRVLNSNRYPLAIDGGLSLEEYQQI 564
+ C++ F +Q L H++S H +
Sbjct: 5 RWDGCSQEFDSQEQLVHHINSEH---IHGERKE-----------------------FV-- 36
Query: 565 VATKSKQCPICEKIFAAPKQMRMHLRHVHSSIKRYMCDI--CGKQFTTLSYLDLHRKSH- 621
C + F A + +H+R H+ K + C C K ++ L L H +SH
Sbjct: 37 --CHWGGCSRELRPFKAQYMLVVHMR-RHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHT 93
Query: 622 NETVKRKEEDKKYEC--DSCNKKFWSKRALSEHMI-IHTGIKEHQCHV--CNTAFYHIRS 676
E K Y C + C+K F + ++H H+ K + C + C + S
Sbjct: 94 GE--------KPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSS 145
Query: 677 LSRHLKIH 684
L +H+K
Sbjct: 146 LRKHVKTV 153
Score = 57.6 bits (140), Expect = 1e-09
Identities = 31/120 (25%), Positives = 55/120 (45%), Gaps = 19/120 (15%)
Query: 1299 CPVCHKTYSTPKTMRRHLRQ--VHTSQKRYLCDICG-----KQFTSTNRVNIHKACVHSS 1351
C + + + + + H+ +H +K ++C G + F + + +H H
Sbjct: 6 WDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMR-RH-- 62
Query: 1352 TGNK-FECIY--CKKKYRRKFDLKEHINKHTGNKPYHCQ--ICKESFYTLKTYRGDLKRH 1406
TG K +C + C+K Y R +LK H+ HTG KPY C+ C ++F + D +H
Sbjct: 63 TGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAF----SNASDRAKH 118
Score = 57.6 bits (140), Expect = 2e-09
Identities = 29/117 (24%), Positives = 49/117 (41%), Gaps = 16/117 (13%)
Query: 1298 DCPVCHKTYSTPKTMRRHLRQVHTSQKRYLCDI--CGKQFTSTNRVNIHKACVHSSTGNK 1355
C + + + H+R HT +K + C C K ++ + H S TG K
Sbjct: 41 GCSRELRPFKAQYMLVVHMR-RHTGEKPHKCTFEGCRKSYSRLENLKTHL---RSHTGEK 96
Query: 1356 -FEC--IYCKKKYRRKFDLKEHINK-HTGNKPYHCQI--CKESFYTLKTYRGDLKRH 1406
+ C C K + D +H N+ H+ KPY C++ C + + T L++H
Sbjct: 97 PYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRY----TDPSSLRKH 149
Score = 54.9 bits (133), Expect = 1e-08
Identities = 42/181 (23%), Positives = 73/181 (40%), Gaps = 42/181 (23%)
Query: 1823 KKFKCDLCQKQFKASRSLQCHKQFVHLGVHKPKFLNMECD--YCSRKFPSKNEVTNHIKS 1880
+ D C ++F + L H H+ + +F+ R F ++ + H++
Sbjct: 2 TDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRR 61
Query: 1881 HMGVRDILCPI--CKKGFIALKHMKTHLKKHMWKAGEIPLEDTYLC--DLCSKVFLEHKD 1936
H G + C C+K + L+++KTHL+ H GE P Y+C + CSK F D
Sbjct: 62 HTGEKPHKCTFEGCRKSYSRLENLKTHLRSH---TGEKP----YMCEHEGCSKAFSNASD 114
Query: 1937 MIRHREWVHGDKCHVCKVCGAKIKGNMKRHMLSHTGEKPFCCDI--CGK--SLKGNLKAH 1992
+H R +H+ EKP+ C + C K + +L+ H
Sbjct: 115 RAKH----------------------QNR---THSNEKPYVCKLPGCTKRYTDPSSLRKH 149
Query: 1993 I 1993
+
Sbjct: 150 V 150
Score = 51.8 bits (125), Expect = 2e-07
Identities = 42/191 (21%), Positives = 77/191 (40%), Gaps = 47/191 (24%)
Query: 1793 EKTKLCPVCNKEYATPVTMRKHLRE--VHVSKKKFKCDLCQKQFKASRSLQCHKQFVHLG 1850
E C++E+ + + H+ +H +K+F C
Sbjct: 1 ETDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWG-------------------- 40
Query: 1851 VHKPKFLNMECDYCSRKFPSKNEVTNHIKSHMGVRDILCPI--CKKGFIALKHMKTHLKK 1908
C R F ++ + H++ H G + C C+K + L+++KTHL+
Sbjct: 41 ---------GCSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRS 91
Query: 1909 HMWKAGEIPLEDTYLC--DLCSKVFLEHKDMIRHREWVH-GDKCHVCKV--CGAK--IKG 1961
H GE P Y+C + CSK F D +H+ H +K +VCK+ C +
Sbjct: 92 H---TGEKP----YMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPS 144
Query: 1962 NMKRHMLSHTG 1972
++++H+ + G
Sbjct: 145 SLRKHVKTVHG 155
Score = 50.7 bits (122), Expect = 4e-07
Identities = 23/91 (25%), Positives = 40/91 (43%), Gaps = 12/91 (13%)
Query: 1324 KRYLCDICGKQFTSTNRVNIHKACVHSSTGNK-FECIYC-----KKKYRRKFDLKEHINK 1377
D C ++F S ++ H H K F C + + ++ ++ L H+ +
Sbjct: 2 TDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRR 61
Query: 1378 HTGNKPYHCQI--CKESFYTLKTYRGDLKRH 1406
HTG KP+ C C++S+ L +LK H
Sbjct: 62 HTGEKPHKCTFEGCRKSYSRL----ENLKTH 88
Score = 48.4 bits (116), Expect = 3e-06
Identities = 39/193 (20%), Positives = 69/193 (35%), Gaps = 54/193 (27%)
Query: 1356 FECIYCKKKYRRKFDLKEHINK---HTGNKPYHCQICKESFYTLK-TYRGDLKRHEQLAE 1411
C +++ + L HIN H K + C S + L H +
Sbjct: 4 CRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRR-- 61
Query: 1412 QSDEMHSTSKFQNKIKKPLDTGDLSWEEWNELVLSGTK--KCPV--CHKTYSTPRQMRIH 1467
H+ G K KC C K+YS ++ H
Sbjct: 62 -----HT----------------------------GEKPHKCTFEGCRKSYSRLENLKTH 88
Query: 1468 LREAHS-QKKYAC--DVCGKQFTSTNRVSQHKAHSHFGIIKTIQRKFECDF--CKKKFYR 1522
LR +H+ +K Y C + C K F++ + ++H+ +H ++ + C C K++
Sbjct: 89 LR-SHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSN-----EKPYVCKLPGCTKRYTD 142
Query: 1523 NFDLQEHINTHTG 1535
L++H+ T G
Sbjct: 143 PSSLRKHVKTVHG 155
Score = 45.3 bits (108), Expect = 3e-05
Identities = 40/181 (22%), Positives = 73/181 (40%), Gaps = 38/181 (20%)
Query: 284 KMFKCDICVASFLTPHKLKTHIKTKHR-TQLKELYTFECQHCEDK-----FSTPFELNKH 337
+ D C F + +L HI ++H + KE F C F + L H
Sbjct: 2 TDCRWDGCSQEFDSQEQLVHHINSEHIHGERKE---FVCHWGGCSRELRPFKAQYMLVVH 58
Query: 338 NESKHEKGRKLNPETGGYTYEEYKEVVVSKSKQCPL--CTKIFTTAKHMRVHLRSVHNGK 395
+H TG ++ C C K ++ ++++ HLRS H G
Sbjct: 59 -MRRH---------TGEKPHK------------CTFEGCRKSYSRLENLKTHLRS-HTG- 94
Query: 396 ERKFIC--DICGKQFTSNIHASRHKNYAHSRDRQ-KMECDYCKRKFTCKRYLAEHINAHT 452
E+ ++C + C K F++ ++H+N HS ++ + C +++T L +H+
Sbjct: 95 EKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTVH 154
Query: 453 G 453
G
Sbjct: 155 G 155
Score = 44.1 bits (105), Expect = 8e-05
Identities = 35/172 (20%), Positives = 60/172 (34%), Gaps = 39/172 (22%)
Query: 319 FECQHCEDKFSTPFELNKHNESKHEKGRKLNPETGGYTYEEYKEVVVSKSKQCPLCTKIF 378
C +F + +L H S+H G + + C + F
Sbjct: 4 CRWDGCSQEFDSQEQLVHHINSEHIHGER-----KEFVCHW---------GGCSRELRPF 49
Query: 379 TTAKHMRVHLRSVHNGKERKFICDI--CGKQFTSNIHASRH-------KNYAHSRDRQKM 429
+ VH+R H G E+ C C K ++ + H K Y
Sbjct: 50 KAQYMLVVHMR-RHTG-EKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPY--------- 98
Query: 430 ECDY--CKRKFTCKRYLAEHIN-AHTGNTIYGCRI--CKKTFLYTNGLRRHI 476
C++ C + F+ A+H N H+ Y C++ C K + + LR+H+
Sbjct: 99 MCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHV 150
Score = 38.0 bits (89), Expect = 0.009
Identities = 41/208 (19%), Positives = 61/208 (29%), Gaps = 62/208 (29%)
Query: 457 YGCRICKKTFLYTNGLRRHILSRHKDTDVVILNEVKDIFPSHLQSYQIKCRYCARTFSTQ 516
C + F L HI S H + + C R F Q
Sbjct: 4 CRWDGCSQEFDSQEQLVHHINSEHIHGE-----------RKEFVCHWGGCSRELRPFKAQ 52
Query: 517 NDLKEHVSSVHMFMTESFENPNEPRVLNSNRYPLAIDGGLSLEEYQQIVATKSKQCPI-- 574
L H+ + E P++ C
Sbjct: 53 YMLVVHM------RRHTGEKPHK--------------------------------CTFEG 74
Query: 575 CEKIFAAPKQMRMHLRHVHSSIKRYMC--DICGKQFTTLSYLDLHRKSHNETVKRKEEDK 632
C K ++ + ++ HLR H+ K YMC + C K F+ S R H E K
Sbjct: 75 CRKSYSRLENLKTHLR-SHTGEKPYMCEHEGCSKAFSNAS----DRAKHQNRTHSNE--K 127
Query: 633 KYECDS--CNKKFWSKRALSEHMIIHTG 658
Y C C K++ +L +H+ G
Sbjct: 128 PYVCKLPGCTKRYTDPSSLRKHVKTVHG 155
Score = 37.6 bits (88), Expect = 0.013
Identities = 32/142 (22%), Positives = 50/142 (35%), Gaps = 29/142 (20%)
Query: 396 ERKFICDICGKQFTSNIHASRHKNYAHSRDRQK------MECDYCKRKFTCKRYLAEHIN 449
E D C ++F S H N H +K C R F + L H+
Sbjct: 1 ETDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMR 60
Query: 450 AHTGNTIYGCRI--CKKTFLYTNGLRRHILSRHKDTDVVILNEVKDIFPSHL--QSYQIK 505
HTG + C C+K++ L+ H+ R SH + Y +
Sbjct: 61 RHTGEKPHKCTFEGCRKSYSRLENLKTHL--R-----------------SHTGEKPYMCE 101
Query: 506 CRYCARTFSTQNDLKEHVSSVH 527
C++ FS +D +H + H
Sbjct: 102 HEGCSKAFSNASDRAKHQNRTH 123
Score = 32.2 bits (74), Expect = 0.79
Identities = 38/179 (21%), Positives = 59/179 (32%), Gaps = 48/179 (26%)
Query: 256 FTCDTCDKPFDTIEKCRRHAIRMHMNP------CKMFKCDICVASFLTPHKLKTHIKTKH 309
D C + FD+ E+ H H++ C C + F + L H++ H
Sbjct: 4 CRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRR-H 62
Query: 310 RTQLKELYT----FECQH--CEDKFSTPFELNKHNESKH--EKGRKLNPETGGYTYEEYK 361
T +C C +S L H S H EK P Y E
Sbjct: 63 --------TGEKPHKCTFEGCRKSYSRLENLKTHLRS-HTGEK-----P----YMCEH-- 102
Query: 362 EVVVSKSKQCPLCTKIFTTAKHMRVHLRSVHNGKERKFICDI--CGKQFTSNIHASRHK 418
C+K F+ A H H+ E+ ++C + C K++T +H
Sbjct: 103 ----------EGCSKAFSNASDRAKHQNRTHSN-EKPYVCKLPGCTKRYTDPSSLRKHV 150
>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator
element, zinc finger protein, DNA- protein recognition;
HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
g.37.1.1 g.37.1.1 PDB: 1znm_A*
Length = 124
Score = 103 bits (260), Expect = 5e-26
Identities = 44/117 (37%), Positives = 57/117 (48%), Gaps = 10/117 (8%)
Query: 966 ECKICHKTFLEKGSLAKHMNWVHGDKCHICKVCGA--KIKGNLQKHMLSHTGEKPFCCHI 1023
K C K F + ++ KH+ HG + H+C CG L++H L HTGEKPF C
Sbjct: 9 PHKGCTKMFRDNSAMRKHL-HTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTF 67
Query: 1024 --CGK--SLKGNLKDHILKCHTGERPYKCDV--CGSSFKDKWYLGVHMRKHNGEKPY 1074
CGK SL NL+ H+ + HTG+RPY C C F L H+ H K
Sbjct: 68 EGCGKRFSLDFNLRTHV-RIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKNN 123
Score = 89.1 bits (222), Expect = 8e-21
Identities = 33/100 (33%), Positives = 49/100 (49%), Gaps = 8/100 (8%)
Query: 1003 KGNLQKHMLSHTGEKPFCCHICGK--SLKGNLKDHILKCHTGERPYKCDV--CGSSFKDK 1058
++KH+ +H G + C CGK LK H HTGE+P++C CG F
Sbjct: 20 NSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQ-LVHTGEKPFQCTFEGCGKRFSLD 77
Query: 1059 WYLGVHMRKHNGEKPYNCDY--CGQTFAARSTFTFHLKKH 1096
+ L H+R H G++PY C + C + FA + H+ H
Sbjct: 78 FNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTH 117
Score = 79.5 bits (197), Expect = 2e-17
Identities = 37/131 (28%), Positives = 54/131 (41%), Gaps = 21/131 (16%)
Query: 928 KPYQCQI--CKKSFANKRSYQRDLKRHKQLAGQLKPEDIHECKICHKTFLEKGSLAKHMN 985
+ C C K F +++H G + H C C K F+E L +H
Sbjct: 4 RTIACPHKGCTKMF----RDNSAMRKHLHTHGP-RV---HVCAECGKAFVESSKLKRHQ- 54
Query: 986 WVH-GDKCHICKV--CGA--KIKGNLQKHMLSHTGEKPFCCHI--CGK--SLKGNLKDHI 1036
VH G+K C CG + NL+ H+ HTG++P+ C C K + NLK HI
Sbjct: 55 LVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHI 114
Query: 1037 LKCHTGERPYK 1047
H + +
Sbjct: 115 -LTHAKAKNNQ 124
Score = 77.9 bits (193), Expect = 7e-17
Identities = 44/119 (36%), Positives = 55/119 (46%), Gaps = 12/119 (10%)
Query: 1919 EDTYLCDL--CSKVFLEHKDMIRHREWVHGDKCHVCKVCGA--KIKGNMKRHMLSHTGEK 1974
T C C+K+F ++ M +H HG + HVC CG +KRH L HTGEK
Sbjct: 3 PRTIACPHKGCTKMFRDNSAMRKH-LHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEK 61
Query: 1975 PFCCDI--CGK--SLKGNLKAHILRCQGERPYKCDV--CGSSFKDKKHFSVHIRNH-GE 2026
PF C CGK SL NL+ H+ G+RPY C C F + HI H
Sbjct: 62 PFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKA 120
Score = 72.5 bits (179), Expect = 5e-15
Identities = 25/87 (28%), Positives = 37/87 (42%), Gaps = 8/87 (9%)
Query: 1016 EKPFCCHI--CGK--SLKGNLKDHILKCHTGERPYKCDVCGSSFKDKWYLGVHMRKHNGE 1071
+ C C K ++ H L H G R + C CG +F + L H H GE
Sbjct: 3 PRTIACPHKGCTKMFRDNSAMRKH-LHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGE 60
Query: 1072 KPYNCDY--CGQTFAARSTFTFHLKKH 1096
KP+ C + CG+ F+ H++ H
Sbjct: 61 KPFQCTFEGCGKRFSLDFNLRTHVRIH 87
Score = 69.5 bits (171), Expect = 5e-14
Identities = 33/122 (27%), Positives = 48/122 (39%), Gaps = 20/122 (16%)
Query: 597 KRYMCDI--CGKQFTTLSYLDLHRKSHNETVKRKEEDKKYECDSCNKKFWSKRALSEHMI 654
+ C C K F S + H +H + + C C K F L H +
Sbjct: 4 RTIACPHKGCTKMFRDNSAMRKHLHTHGP--------RVHVCAECGKAFVESSKLKRHQL 55
Query: 655 IHTGIKEHQCHV--CNTAFYHIRSLSRHLKIH--EYNESKMYKCPV--CSKMFTELYEMK 708
+HTG K QC C F +L H++IH + + Y CP C+K F + +K
Sbjct: 56 VHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGD----RPYVCPFDGCNKKFAQSTNLK 111
Query: 709 RH 710
H
Sbjct: 112 SH 113
Score = 66.8 bits (164), Expect = 5e-13
Identities = 38/120 (31%), Positives = 60/120 (50%), Gaps = 17/120 (14%)
Query: 1450 KCPV--CHKTYSTPRQMRIHLREAHSQKKYACDVCGKQFTSTNRVSQHKAHSHFGIIKTI 1507
CP C K + MR HL H + + C CGK F ++++ +H+ ++ T
Sbjct: 7 ACPHKGCTKMFRDNSAMRKHLH-THGPRVHVCAECGKAFVESSKLKRHQ------LVHTG 59
Query: 1508 QRKFECDF--CKKKFYRNFDLQEHINTHTGNKPYQCQI--CNKSFGTRRNYRLHLKRHKR 1563
++ F+C F C K+F +F+L+ H+ HTG++PY C CNK F +LK H
Sbjct: 60 EKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKF----AQSTNLKSHIL 115
Score = 61.0 bits (149), Expect = 4e-11
Identities = 37/131 (28%), Positives = 53/131 (40%), Gaps = 32/131 (24%)
Query: 1475 KKYACDV--CGKQFTSTNRVSQHKAHSHFGIIKTIQRKFECDFCKKKFYRNFDLQEHINT 1532
+ AC C K F + + +H H+H G R C C K F + L+ H
Sbjct: 4 RTIACPHKGCTKMFRDNSAMRKHL-HTH-G-----PRVHVCAECGKAFVESSKLKRHQLV 56
Query: 1533 HTGNKPYQCQI--CNKSFGTRRNYRLHLKRHKRSAGQLKPEDIH------ECKI--CHKI 1582
HTG KP+QC C K F + +L+ H R IH C C+K
Sbjct: 57 HTGEKPFQCTFEGCGKRF----SLDFNLRTHVR---------IHTGDRPYVCPFDGCNKK 103
Query: 1583 FLENSRLTRHM 1593
F +++ L H+
Sbjct: 104 FAQSTNLKSHI 114
Score = 53.7 bits (130), Expect = 2e-08
Identities = 36/110 (32%), Positives = 57/110 (51%), Gaps = 14/110 (12%)
Query: 1302 CHKTYSTPKTMRRHLRQVHTSQKRYLCDICGKQFTSTNRVNIHKACVHSSTGNK-FECIY 1360
C K + MR+HL H + ++C CGK F ++++ H+ VH TG K F+C +
Sbjct: 13 CTKMFRDNSAMRKHLH-THG-PRVHVCAECGKAFVESSKLKRHQL-VH--TGEKPFQCTF 67
Query: 1361 --CKKKYRRKFDLKEHINKHTGNKPYHCQI--CKESFYTLKTYRGDLKRH 1406
C K++ F+L+ H+ HTG++PY C C + F +LK H
Sbjct: 68 EGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKF----AQSTNLKSH 113
Score = 52.5 bits (127), Expect = 5e-08
Identities = 27/95 (28%), Positives = 42/95 (44%), Gaps = 11/95 (11%)
Query: 841 CPVCHKTYSTPKSMRKHLREVHSSQKKYVCDM--CGKQFTSNNRVSQHKAYSHFGIIKTI 898
C C K + +++H VH+ +K + C CGK+F+ + + H I T
Sbjct: 37 CAECGKAFVESSKLKRHQL-VHTGEKPFQCTFEGCGKRFSLDFNLRTHV------RIHTG 89
Query: 899 ERKFECDY--CKMKFKSKSFLSEHINTHTGNKPYQ 931
+R + C + C KF + L HI TH K Q
Sbjct: 90 DRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKNNQ 124
Score = 51.0 bits (123), Expect = 1e-07
Identities = 28/91 (30%), Positives = 44/91 (48%), Gaps = 9/91 (9%)
Query: 1299 CPVCHKTYSTPKTMRRHLRQVHTSQKRYLCDI--CGKQFTSTNRVNIHKACVHSSTGNK- 1355
C C K + ++RH VHT +K + C CGK+F+ + H +H TG++
Sbjct: 37 CAECGKAFVESSKLKRHQL-VHTGEKPFQCTFEGCGKRFSLDFNLRTHVR-IH--TGDRP 92
Query: 1356 FECIY--CKKKYRRKFDLKEHINKHTGNKPY 1384
+ C + C KK+ + +LK HI H K
Sbjct: 93 YVCPFDGCNKKFAQSTNLKSHILTHAKAKNN 123
Score = 50.2 bits (121), Expect = 3e-07
Identities = 29/97 (29%), Positives = 41/97 (42%), Gaps = 12/97 (12%)
Query: 571 QCPICEKIFAAPKQMRMHLRHVHSSIKRYMCDI--CGKQFTTLSYLDLHRKSHNETVKRK 628
C C K F +++ H VH+ K + C CGK+F+ L H + H
Sbjct: 36 VCAECGKAFVESSKLKRHQL-VHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTG----- 89
Query: 629 EEDKKYECDS--CNKKFWSKRALSEHMIIHTGIKEHQ 663
D+ Y C CNKKF L H++ H K +Q
Sbjct: 90 --DRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKNNQ 124
Score = 43.7 bits (104), Expect = 5e-05
Identities = 34/114 (29%), Positives = 47/114 (41%), Gaps = 23/114 (20%)
Query: 374 CTKIFTTAKHMRVHLRSVHNGKERKFICDICGKQFTSNIHASRH-------KNYAHSRDR 426
CTK+F MR HL H R +C CGK F + RH K +
Sbjct: 13 CTKMFRDNSAMRKHLH-THG--PRVHVCAECGKAFVESSKLKRHQLVHTGEKPF------ 63
Query: 427 QKMECDY--CKRKFTCKRYLAEHINAHTGNTIYGCRI--CKKTFLYTNGLRRHI 476
+C + C ++F+ L H+ HTG+ Y C C K F + L+ HI
Sbjct: 64 ---QCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHI 114
Score = 43.3 bits (103), Expect = 8e-05
Identities = 35/126 (27%), Positives = 54/126 (42%), Gaps = 18/126 (14%)
Query: 1860 ECDY--CSRKFPSKNEVTNHIKSHMGVRDILCPICKKGFIALKHMKTHLKKHMWKAGEIP 1917
C + C++ F + + H+ +H G R +C C K F+ +K H H GE P
Sbjct: 7 ACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVH---TGEKP 62
Query: 1918 LEDTYLCDL--CSKVFLEHKDMIRHREWVH-GDKCHVCKV--CGAK--IKGNMKRHMLSH 1970
+ C C K F ++ H +H GD+ +VC C K N+K H+L+H
Sbjct: 63 ----FQCTFEGCGKRFSLDFNLRTHVR-IHTGDRPYVCPFDGCNKKFAQSTNLKSHILTH 117
Query: 1971 TGEKPF 1976
K
Sbjct: 118 AKAKNN 123
Score = 42.5 bits (101), Expect = 1e-04
Identities = 23/88 (26%), Positives = 33/88 (37%), Gaps = 13/88 (14%)
Query: 1324 KRYLCDI--CGKQFTSTNRVNIHKACVHSSTGNK-FECIYCKKKYRRKFDLKEHINKHTG 1380
+ C C K F + + H H G + C C K + LK H HTG
Sbjct: 4 RTIACPHKGCTKMFRDNSAMRKHLH-TH---GPRVHVCAECGKAFVESSKLKRHQLVHTG 59
Query: 1381 NKPYHCQI--CKESFYTLKTYRGDLKRH 1406
KP+ C C + F + +L+ H
Sbjct: 60 EKPFQCTFEGCGKRF----SLDFNLRTH 83
Score = 40.2 bits (95), Expect = 0.001
Identities = 40/137 (29%), Positives = 53/137 (38%), Gaps = 40/137 (29%)
Query: 688 ESKMYKCPV--CSKMFTELYEMKRHRDHKHGGKCHVCKICGATIKLFTELE--------- 736
E + CP C+KMF + M++H H HG + HVC CG K F E
Sbjct: 2 EPRTIACPHKGCTKMFRDNSAMRKHL-HTHGPRVHVCAECG---KAFVESSKLKRHQLVH 57
Query: 737 --EKEDSSFERKKSKDSFHCDT--CGKYFRSRQICNKHIKRVHLNPT--KTFKCDL--CS 788
EK F C CGK F H R+H T + + C C+
Sbjct: 58 TGEK------------PFQCTFEGCGKRFSLDFNLRTH-VRIH---TGDRPYVCPFDGCN 101
Query: 789 DRFSTSAKLKKHVDKIH 805
+F+ S LK H+ H
Sbjct: 102 KKFAQSTNLKSHI-LTH 117
Score = 38.7 bits (91), Expect = 0.003
Identities = 39/123 (31%), Positives = 55/123 (44%), Gaps = 14/123 (11%)
Query: 1793 EKTKLCPV--CNKEYATPVTMRKHLREVHVSKKKFKCDLCQKQFKASRSLQCHKQFVHLG 1850
+T CP C K + MRKHL H + C C K F S L+ H Q VH G
Sbjct: 3 PRTIACPHKGCTKMFRDNSAMRKHLH-TH-GPRVHVCAECGKAFVESSKLKRH-QLVHTG 59
Query: 1851 VHKPKFLNMECDY--CSRKFPSKNEVTNHIKSHMGVRDILCPI--CKKGFIALKHMKTHL 1906
KP +C + C ++F + H++ H G R +CP C K F ++K+H+
Sbjct: 60 -EKP----FQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHI 114
Query: 1907 KKH 1909
H
Sbjct: 115 LTH 117
Score = 37.1 bits (87), Expect = 0.010
Identities = 25/95 (26%), Positives = 36/95 (37%), Gaps = 22/95 (23%)
Query: 370 QCPLCTKIFTTAKHMRVHLRSVHNGKERKFICDI--CGKQFTSNIHASRH-------KNY 420
C C K F + ++ H VH G E+ F C CGK+F+ + + H + Y
Sbjct: 36 VCAECGKAFVESSKLKRHQL-VHTG-EKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPY 93
Query: 421 AHSRDRQKMECDY--CKRKFTCKRYLAEHINAHTG 453
C + C +KF L HI H
Sbjct: 94 ---------VCPFDGCNKKFAQSTNLKSHILTHAK 119
Score = 28.6 bits (65), Expect = 9.3
Identities = 7/30 (23%), Positives = 10/30 (33%), Gaps = 2/30 (6%)
Query: 1071 EKPYNCDY--CGQTFAARSTFTFHLKKHEE 1098
+ C + C + F S HL H
Sbjct: 3 PRTIACPHKGCTKMFRDNSAMRKHLHTHGP 32
>1tf6_A Protein (transcription factor IIIA); complex (transcription
regulation/DNA), RNA polymerase III, transcription
initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus
laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
g.37.1.1 g.37.1.1 PDB: 1tf3_A
Length = 190
Score = 104 bits (262), Expect = 2e-25
Identities = 49/203 (24%), Positives = 68/203 (33%), Gaps = 39/203 (19%)
Query: 920 HINTHTGNKPYQCQI--CKKSFANKRSYQRDLKRHKQLAGQLKPEDIH------ECK--I 969
K Y C C ++ NK L+ H H CK
Sbjct: 3 EKALPVVYKRYICSFADCGAAY-NKNWK---LQAHLC---------KHTGEKPFPCKEEG 49
Query: 970 CHKTFLEKGSLAKHMNWVH-GDKCHICK--VCGAK--IKGNLQKHMLSHTGEK--PFCCH 1022
C K F L +H H G+K C C + K N++KH K + CH
Sbjct: 50 CEKGFTSLHHLTRHSL-THTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCH 108
Query: 1023 I--CGK--SLKGNLKDHILKCHTGERPYKC--DVCGSSFKDKWYLGVHMRKHNGEKPYNC 1076
CGK LK H HT + PY+C + C F L H + H G
Sbjct: 109 FENCGKAFKKHNQLKVHQ-FSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKD 167
Query: 1077 DYCGQTFAARSTFTFHLKK-HEE 1098
D C + + H+ + H++
Sbjct: 168 DSCSFVGKTWTLYLKHVAECHQD 190
Score = 71.5 bits (176), Expect = 5e-14
Identities = 45/176 (25%), Positives = 67/176 (38%), Gaps = 30/176 (17%)
Query: 575 CEKIFAAPKQMRMHLRHVHSSIKRYMCD--ICGKQFTTLSYLDLHRKSHNETVKRKEEDK 632
C + +++ HL H+ K + C C K FT+L +L H +H +K
Sbjct: 20 CGAAYNKNWKLQAHLC-KHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHT-------GEK 71
Query: 633 KYECD--SCNKKFWSKRALSEHMIIHTGIKEHQ--CHV--CNTAFYHIRSLSRHLKIH-- 684
+ CD C+ +F +K + +H IK CH C AF L H H
Sbjct: 72 NFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQ 131
Query: 685 EYNESKMYKC--PVCSKMFTELYEMKRH-RDH--KHGGKCHVCKICGATIKLFTEL 735
+ Y+C C K F+ +KRH + H K C G K +T
Sbjct: 132 Q----LPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVG---KTWTLY 180
Score = 67.6 bits (166), Expect = 1e-12
Identities = 42/154 (27%), Positives = 64/154 (41%), Gaps = 23/154 (14%)
Query: 1450 KCPVCHKTYSTPRQMRIHLREAHSQKKYACD--VCGKQFTSTNRVSQHKAHSHFGIIKTI 1507
C Y+ +++ HL + +K + C C K FTS + +++H + T
Sbjct: 16 SFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHS------LTHTG 69
Query: 1508 QRKFECD--FCKKKFYRNFDLQEHINTHTGNK--PYQCQI--CNKSFGTRRNYRLHLKRH 1561
++ F CD C +F ++++H N K Y C C K+F LK H
Sbjct: 70 EKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAF----KKHNQLKVH 125
Query: 1562 KRSAGQLKPEDIHECK--ICHKIFLENSRLTRHM 1593
+ S Q P +EC C K F SRL RH
Sbjct: 126 QFSHTQQLP---YECPHEGCDKRFSLPSRLKRHE 156
Score = 65.3 bits (160), Expect = 6e-12
Identities = 32/142 (22%), Positives = 54/142 (38%), Gaps = 25/142 (17%)
Query: 1464 MRIHLREAHSQKKYACD--VCGKQFTSTNRVSQHKAHSHFGIIKTIQRK--FECDF--CK 1517
H E K + CD C +FT+ + +H + + C F C
Sbjct: 64 SLTHTGE----KNFTCDSDGCDLRFTTKANMKKHF------NRFHNIKICVYVCHFENCG 113
Query: 1518 KKFYRNFDLQEHINTHTGNKPYQC--QICNKSFGTRRNYRLHLKRHKRSAGQLKPEDIHE 1575
K F ++ L+ H +HT PY+C + C+K F + LKRH++ +
Sbjct: 114 KAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRF----SLPSRLKRHEKVHAGYPCKKDDS 169
Query: 1576 CKICHKIFLENSRLTRHMNFTH 1597
C K + + +H+ H
Sbjct: 170 CSFVGKTW---TLYLKHVAECH 188
Score = 65.3 bits (160), Expect = 6e-12
Identities = 52/224 (23%), Positives = 77/224 (34%), Gaps = 60/224 (26%)
Query: 1352 TGNK-FECIY--CKKKYRRKFDLKEHINKHTGNKPYHC--QICKESFYTLKTYRGDLKRH 1406
K + C + C Y + + L+ H+ KHTG KP+ C + C++ F T L RH
Sbjct: 8 VVYKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGF----TSLHHLTRH 63
Query: 1407 EQLAEQSDEMHSTSKFQNKIKKPLDTGDLSWEEWNELVLSGTK--KC--PVCHKTYSTPR 1462
H+ G K C C ++T
Sbjct: 64 SL-------THT----------------------------GEKNFTCDSDGCDLRFTTKA 88
Query: 1463 QMRIHLREAHSQKK--YACDV--CGKQFTSTNRVSQHKAHSHFGIIKTIQRKFEC--DFC 1516
M+ H H+ K Y C CGK F N++ H+ T Q +EC + C
Sbjct: 89 NMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQ------FSHTQQLPYECPHEGC 142
Query: 1517 KKKFYRNFDLQEHINTHTGNKPYQCQICNKSFGTRRNYRLHLKR 1560
K+F L+ H H G + C+ T Y H+
Sbjct: 143 DKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTWTLYLKHVAE 186
Score = 64.2 bits (157), Expect = 2e-11
Identities = 45/224 (20%), Positives = 71/224 (31%), Gaps = 52/224 (23%)
Query: 1464 MRIHLREAHSQKKYACDV--CGKQFTSTNRVSQHKAHSHFGIIKTIQRKFECD--FCKKK 1519
+ + K+Y C CG + ++ H T ++ F C C+K
Sbjct: 4 KALPVVY----KRYICSFADCGAAYNKNWKLQAHL------CKHTGEKPFPCKEEGCEKG 53
Query: 1520 FYRNFDLQEHINTHTGNKPYQC--QICNKSFGTRRNYRLHLKRHKRSAGQLKPEDIHECK 1577
F L H THTG K + C C+ F T+ N + H R ++ + C
Sbjct: 54 FTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRF--HNIKICV---YVCH 108
Query: 1578 I--CHKIFLENSRLTRHMNFTH-GDK---CHGATNSTDKIFRDADS-IVHPNSTVWAKRL 1630
C K F ++++L H F+H C DK F H +++
Sbjct: 109 FENCGKAFKKHNQLKVHQ-FSHTQQLPYECP--HEGCDKRFSLPSRLKRH-------EKV 158
Query: 1631 ITELKEDEYSSLKRAISKGSFKCGICGKCYKTREKCRRHIKRIH 1674
K C KT +H+ H
Sbjct: 159 HAGYP--------------CKKDDSCSFVGKTWTLYLKHVAECH 188
Score = 62.6 bits (153), Expect = 6e-11
Identities = 52/201 (25%), Positives = 67/201 (33%), Gaps = 50/201 (24%)
Query: 632 KKYECDS--CNKKFWSKRALSEHMIIHTGIKEHQCH--VCNTAFYHIRSLSRHLKIH--E 685
K+Y C C + L H+ HTG K C C F + L+RH H E
Sbjct: 11 KRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGE 70
Query: 686 YNESKMYKC--PVCSKMFTELYEMKRHRDHKHGGKCH--VCKI--CGATIKLFTELEEKE 739
K + C C FT MK+H + H K VC CG K F
Sbjct: 71 ----KNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCG---KAFK------ 117
Query: 740 DSSFERKKSKDSFH-----------C--DTCGKYFRSRQICNKHIKRVHLNPT--KTFKC 784
K ++ H C + C K F +H ++VH K
Sbjct: 118 ------KHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRH-EKVH---AGYPCKKD 167
Query: 785 DLCSDRFSTSAKLKKHVDKIH 805
D CS T KHV + H
Sbjct: 168 DSCSFVGKTWTLYLKHVAECH 188
Score = 61.1 bits (149), Expect = 2e-10
Identities = 54/226 (23%), Positives = 76/226 (33%), Gaps = 57/226 (25%)
Query: 1813 KHLREVHVSKKKFKCDL--CQKQFKASRSLQCHKQFVHLGVHKPKFLNMECDYCSRKFPS 1870
+ V K++ C C + + LQ H H G KP C
Sbjct: 2 GEKA-LPVVYKRYICSFADCGAAYNKNWKLQAHLC-KHTG-EKP----FPCKEEG----- 49
Query: 1871 KNEVTNHIKSHMGVRDILCPICKKGFIALKHMKTHLKKHMWKAGEIPLEDTYLCD--LCS 1928
C+KGF +L H+ H H GE + CD C
Sbjct: 50 ---------------------CEKGFTSLHHLTRHSLTH---TGEKN----FTCDSDGCD 81
Query: 1929 KVFLEHKDMIRHREWVHGDKCH--VCKV--CGA--KIKGNMKRHMLSHTGEKPFCC--DI 1980
F +M +H H K VC CG K +K H SHT + P+ C +
Sbjct: 82 LRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEG 141
Query: 1981 CGK--SLKGNLKAHILRCQGERPYKCDVCGSSFKDKKHFSVHIRNH 2024
C K SL LK H G K D C K +++++++
Sbjct: 142 CDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVG---KTWTLYLKHV 184
Score = 61.1 bits (149), Expect = 2e-10
Identities = 36/144 (25%), Positives = 52/144 (36%), Gaps = 28/144 (19%)
Query: 1899 LKHMKTHLKKHMWKAGEIPLEDTYLCDL--CSKVFLEHKDMIRHREWVH-GDKCHVCK-- 1953
+ Y+C C + ++ + H H G+K CK
Sbjct: 1 MGEKALP-------VVYKR----YICSFADCGAAYNKNWKLQAHLC-KHTGEKPFPCKEE 48
Query: 1954 VCGA--KIKGNMKRHMLSHTGEKPFCCD--ICGK--SLKGNLKAHILRCQGER--PYKCD 2005
C ++ RH L+HTGEK F CD C + K N+K H R + Y C
Sbjct: 49 GCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCH 108
Query: 2006 V--CGSSFKDKKHFSVHIRNH-GE 2026
CG +FK VH +H +
Sbjct: 109 FENCGKAFKKHNQLKVHQFSHTQQ 132
Score = 60.7 bits (148), Expect = 3e-10
Identities = 44/211 (20%), Positives = 68/211 (32%), Gaps = 53/211 (25%)
Query: 757 CGKYFRSRQICNKHIKRVHLNPT--KTFKCD--LCSDRFSTSAKLKKHVDKIHFTPEFQE 812
CG + H H T K F C C F++ L +H H
Sbjct: 20 CGAAYNKNWKLQAH-LCKH---TGEKPFPCKEEGCEKGFTSLHHLTRHS-LTH------- 67
Query: 813 PSKKNEPLDTGD--YTLEQWNELVTAQSKDCPVCHKTYSTPKSMRKHLREVHSSQKK--Y 868
TG+ +T + C ++T +M+KH + K Y
Sbjct: 68 ---------TGEKNFTCDS------------DGCDLRFTTKANMKKHFN-RFHNIKICVY 105
Query: 869 VCDM--CGKQFTSNNRVSQHKAYSHFGIIKTIERKFEC--DYCKMKFKSKSFLSEHINTH 924
VC CGK F +N++ H+ T + +EC + C +F S L H H
Sbjct: 106 VCHFENCGKAFKKHNQLKVHQ------FSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVH 159
Query: 925 TGNKPYQCQICKKSFANKRSYQRDLKR-HKQ 954
G + C Y + + H+
Sbjct: 160 AGYPCKKDDSCSFVGKTWTLYLKHVAECHQD 190
Score = 58.0 bits (141), Expect = 3e-09
Identities = 29/119 (24%), Positives = 46/119 (38%), Gaps = 17/119 (14%)
Query: 575 CEKIFAAPKQMRMHLRHVHSSIKR--YMCDI--CGKQFTTLSYLDLHRKSH-NETVKRKE 629
C+ F M+ H +IK Y+C CGK F + L +H+ SH +
Sbjct: 80 CDLRFTTKANMKKHFN-RFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQ------ 132
Query: 630 EDKKYEC--DSCNKKFWSKRALSEHMIIHTGIKEHQCHVCNTAFYHIRSLSRH-LKIHE 685
YEC + C+K+F L H +H G + C+ +H + H+
Sbjct: 133 --LPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTWTLYLKHVAECHQ 189
Score = 52.6 bits (127), Expect = 2e-07
Identities = 29/114 (25%), Positives = 44/114 (38%), Gaps = 14/114 (12%)
Query: 1302 CHKTYSTPKTMRRHLRQVHTSQKR--YLCDI--CGKQFTSTNRVNIHKACVHSSTGNK-F 1356
C ++T M++H + K Y+C CGK F N++ +H+ H T +
Sbjct: 80 CDLRFTTKANMKKHFN-RFHNIKICVYVCHFENCGKAFKKHNQLKVHQ-FSH--TQQLPY 135
Query: 1357 EC--IYCKKKYRRKFDLKEHINKHTGNKPYHCQICKESFYTLKTYRGDLKRHEQ 1408
EC C K++ LK H H G C KT+ LK +
Sbjct: 136 ECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVG---KTWTLYLKHVAE 186
Score = 49.5 bits (119), Expect = 2e-06
Identities = 50/240 (20%), Positives = 70/240 (29%), Gaps = 75/240 (31%)
Query: 652 HMIIHTGIKEHQCHV--CNTAFYHIRSLSRHLKIH--EYNESKMYKC--PVCSKMFTELY 705
+ K + C C A+ L HL H E K + C C K FT L+
Sbjct: 3 EKALPVVYKRYICSFADCGAAYNKNWKLQAHLCKHTGE----KPFPCKEEGCEKGFTSLH 58
Query: 706 EMKRH-RDHKHGGKCHVCKICGATIKLFTELEEKEDSSFERKKSKDSFHCDTCGKYFRSR 764
+ RH H G K C G C F ++
Sbjct: 59 HLTRHSLTHT-GEKNFTCDSDG------------------------------CDLRFTTK 87
Query: 765 QICNKHIKRVHLNPTKTFKCDL--CSDRFSTSAKLKKHVDKIHFTPEFQEPSKKNEPLDT 822
KH R H + C C F +LK H H T + P +
Sbjct: 88 ANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVH-QFSH-TQQ--LPYECPH---- 139
Query: 823 GDYTLEQWNELVTAQSKDCPVCHKTYSTPKSMRKHLREVHS---SQKKYVCDMCGKQFTS 879
C K +S P +++H + VH+ +K C GK +T
Sbjct: 140 -------------------EGCDKRFSLPSRLKRHEK-VHAGYPCKKDDSCSFVGKTWTL 179
Score = 43.7 bits (104), Expect = 2e-04
Identities = 44/185 (23%), Positives = 60/185 (32%), Gaps = 29/185 (15%)
Query: 1801 CNKEYATPVTMRKHLREVHVSKKKFKCD--LCQKQFKASRSLQCHKQFVHLGVHKPKFLN 1858
C Y ++ HL H +K F C C+K F + L H H G K
Sbjct: 20 CGAAYNKNWKLQAHLC-KHTGEKPFPCKEEGCEKGFTSLHHLTRHSL-THTG-EKN---- 72
Query: 1859 MECD--YCSRKFPSKNEVTNHIKSHMGVRDI----LCPICKKGFIALKHMKTHLKKHMWK 1912
CD C +F +K + H ++ C K F +K H H
Sbjct: 73 FTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSH--- 129
Query: 1913 AGEIPLEDTYLC--DLCSKVFLEHKDMIRHREWVH----GDKCHVCKVCGAKIKGNMKRH 1966
++P Y C + C K F + RH E VH K C G +K
Sbjct: 130 TQQLP----YECPHEGCDKRFSLPSRLKRH-EKVHAGYPCKKDDSCSFVGKTWTLYLKHV 184
Query: 1967 MLSHT 1971
H
Sbjct: 185 AECHQ 189
Score = 43.0 bits (102), Expect = 3e-04
Identities = 28/122 (22%), Positives = 40/122 (32%), Gaps = 20/122 (16%)
Query: 372 PLCTKIFTTAKHMRVHLRSVHNGKERKFICDI--CGKQFTSNIHASRH-------KNYAH 422
C FTT +M+ H HN K ++C CGK F + H Y
Sbjct: 78 DGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPY-- 135
Query: 423 SRDRQKMEC--DYCKRKFTCKRYLAEHINAHTGNTIYGCRICKKTFLYTNGLRRHILSRH 480
EC + C ++F+ L H H G C +H+ H
Sbjct: 136 -------ECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTWTLYLKHVAECH 188
Query: 481 KD 482
+D
Sbjct: 189 QD 190
Score = 42.6 bits (101), Expect = 4e-04
Identities = 17/75 (22%), Positives = 20/75 (26%), Gaps = 23/75 (30%)
Query: 1529 HINTHTGNKPYQCQI--CNKSFGTRRNYRLHLKRHKRSAGQLKPEDIH------ECK--I 1578
K Y C C ++ N L+ H H CK
Sbjct: 3 EKALPVVYKRYICSFADCGAAY----NKNWKLQAHLC---------KHTGEKPFPCKEEG 49
Query: 1579 CHKIFLENSRLTRHM 1593
C K F LTRH
Sbjct: 50 CEKGFTSLHHLTRHS 64
Score = 41.8 bits (99), Expect = 7e-04
Identities = 42/166 (25%), Positives = 58/166 (34%), Gaps = 47/166 (28%)
Query: 374 CTKIFTTAKHMRVHLRSVHNGKERKFICD--ICGKQFTSNIHASRH-------KNYAHSR 424
C + ++ HL H G E+ F C C K FTS H +RH KN+
Sbjct: 20 CGAAYNKNWKLQAHLC-KHTG-EKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNF---- 73
Query: 425 DRQKMECD--YCKRKFTCKRYLAEHINAHTGN--TIYGCRI--CKKTFLYTNGLRRH--I 476
CD C +FT K + +H N +Y C C K F N L+ H
Sbjct: 74 -----TCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFS 128
Query: 477 LSRHKDTDVVILNEVKDIFPSHLQSYQIKCRYCARTFSTQNDLKEH 522
++ P Y+ C + FS + LK H
Sbjct: 129 HTQQL--------------P-----YECPHEGCDKRFSLPSRLKRH 155
Score = 36.4 bits (85), Expect = 0.042
Identities = 45/242 (18%), Positives = 68/242 (28%), Gaps = 80/242 (33%)
Query: 430 ECDY--CKRKFTCKRYLAEHINAHTGNTIYGC--RICKKTFLYTNGLRRHILSRHKDTDV 485
C + C + L H+ HTG + C C+K F H L+RH T
Sbjct: 14 ICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFT-----SLHHLTRHSLT-- 66
Query: 486 VILNEVKDIFPSHL--QSYQIKCRYCARTFSTQNDLKEHVSSVHMFMTESFENPNEPRVL 543
H +++ C F+T+ ++K+H
Sbjct: 67 ------------HTGEKNFTCDSDGCDLRFTTKANMKKH--------------------- 93
Query: 544 NSNRYPLAIDGGLSLEEYQQIVATKSKQCPI------CEKIFAAPKQMRMHLRHVHSSIK 597
K C C K F Q+++H H+
Sbjct: 94 -------------------FNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQF-SHTQQL 133
Query: 598 RYMC--DICGKQFTTLSYLDLHRKSHNETVKRKEEDKKYECDSCNKKFWSKRALSEHMII 655
Y C + C K+F+ S L H K H + K C K + L
Sbjct: 134 PYECPHEGCDKRFSLPSRLKRHEKVH--AGYPCK--KDDSCSFVGKTW--TLYLKHVAEC 187
Query: 656 HT 657
H
Sbjct: 188 HQ 189
>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein,
DNA- binding, transcription, C2H2-type zinc finger,
structural genomics, NPPSFA; NMR {Homo sapiens} SCOP:
g.37.1.1 g.37.1.1 g.37.1.1
Length = 96
Score = 99.4 bits (249), Expect = 7e-25
Identities = 34/87 (39%), Positives = 44/87 (50%), Gaps = 3/87 (3%)
Query: 1012 SHTGEKPFCCHICGK--SLKGNLKDHILKCHTGERPYKCDVCGSSFKDKWYLGVHMRKHN 1069
S P C +CGK S K LK H+ +CHTG +PYKC C + D L H+R H+
Sbjct: 2 SSGSSGPHKCEVCGKCFSRKDKLKTHM-RCHTGVKPYKCKTCDYAAADSSSLNKHLRIHS 60
Query: 1070 GEKPYNCDYCGQTFAARSTFTFHLKKH 1096
E+P+ C C S T HL+ H
Sbjct: 61 DERPFKCQICPYASRNSSQLTVHLRSH 87
Score = 95.2 bits (238), Expect = 2e-23
Identities = 32/92 (34%), Positives = 47/92 (51%), Gaps = 5/92 (5%)
Query: 989 GDKCHICKVCGA--KIKGNLQKHMLSHTGEKPFCCHICGK--SLKGNLKDHILKCHTGER 1044
H C+VCG K L+ HM HTG KP+ C C + +L H L+ H+ ER
Sbjct: 5 SSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKH-LRIHSDER 63
Query: 1045 PYKCDVCGSSFKDKWYLGVHMRKHNGEKPYNC 1076
P+KC +C + ++ L VH+R H G+ +
Sbjct: 64 PFKCQICPYASRNSSQLTVHLRSHTGDSGPSS 95
Score = 69.8 bits (172), Expect = 2e-14
Identities = 24/104 (23%), Positives = 44/104 (42%), Gaps = 13/104 (12%)
Query: 593 HSSIKRYMCDICGKQFTTLSYLDLHRKSHNETVKRKEEDKKYECDSCNKKFWSKRALSEH 652
S + C++CGK F+ L H + H K Y+C +C+ +L++H
Sbjct: 3 SGSSGPHKCEVCGKCFSRKDKLKTHMRCHT-------GVKPYKCKTCDYAAADSSSLNKH 55
Query: 653 MIIHTGIKEHQCHVCNTAFYHIRSLSRHLKIH--EYNESKMYKC 694
+ IH+ + +C +C A + L+ HL+ H +
Sbjct: 56 LRIHSDERPFKCQICPYASRNSSQLTVHLRSHTGD----SGPSS 95
Score = 69.0 bits (170), Expect = 4e-14
Identities = 29/86 (33%), Positives = 44/86 (51%), Gaps = 5/86 (5%)
Query: 1946 GDKCHVCKVCGA--KIKGNMKRHMLSHTGEKPFCCDICGK--SLKGNLKAHILRCQGERP 2001
H C+VCG K +K HM HTG KP+ C C + +L H+ ERP
Sbjct: 5 SSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERP 64
Query: 2002 YKCDVCGSSFKDKKHFSVHIRNH-GE 2026
+KC +C + ++ +VH+R+H G+
Sbjct: 65 FKCQICPYASRNSSQLTVHLRSHTGD 90
Score = 64.8 bits (159), Expect = 1e-12
Identities = 27/89 (30%), Positives = 41/89 (46%), Gaps = 19/89 (21%)
Query: 1511 FECDFCKKKFYRNFDLQEHINTHTGNKPYQCQICNKSFGTRRNYRLHLKRHKRSAGQLKP 1570
+C+ C K F R L+ H+ HTG KPY+C+ C+ + L +H R
Sbjct: 9 HKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAA----ADSSSLNKHLR------- 57
Query: 1571 EDIH------ECKICHKIFLENSRLTRHM 1593
IH +C+IC +S+LT H+
Sbjct: 58 --IHSDERPFKCQICPYASRNSSQLTVHL 84
Score = 64.4 bits (158), Expect = 1e-12
Identities = 21/89 (23%), Positives = 38/89 (42%), Gaps = 10/89 (11%)
Query: 1475 KKYACDVCGKQFTSTNRVSQHKAHSHFGIIKTIQRKFECDFCKKKFYRNFDLQEHINTHT 1534
+ C+VCGK F+ +++ H T + ++C C + L +H+ H+
Sbjct: 7 GPHKCEVCGKCFSRKDKLKTHM------RCHTGVKPYKCKTCDYAAADSSSLNKHLRIHS 60
Query: 1535 GNKPYQCQICNKSFGTRRNYRLHLKRHKR 1563
+P++CQIC + L H R
Sbjct: 61 DERPFKCQICPYAS----RNSSQLTVHLR 85
Score = 64.0 bits (157), Expect = 2e-12
Identities = 28/125 (22%), Positives = 43/125 (34%), Gaps = 33/125 (26%)
Query: 897 TIERKFECDYCKMKFKSKSFLSEHINTHTGNKPYQCQICKKSFANKRSYQRDLKRHKQLA 956
+C+ C F K L H+ HTG KPY+C+ C + A+ S L +H ++
Sbjct: 4 GSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSS----LNKHLRIH 59
Query: 957 GQLKPEDIHECKICHKTFLEKGSLAKHMNWVHGDKCHICKVCGAKIKGNLQKHMLSHTGE 1016
+P +C+IC L H+ SHTG+
Sbjct: 60 SDERP---FKCQICPYASRNSSQLTVHLR--------------------------SHTGD 90
Query: 1017 KPFCC 1021
Sbjct: 91 SGPSS 95
Score = 63.6 bits (156), Expect = 3e-12
Identities = 22/92 (23%), Positives = 40/92 (43%), Gaps = 10/92 (10%)
Query: 862 HSSQKKYVCDMCGKQFTSNNRVSQHKAYSHFGIIKTIERKFECDYCKMKFKSKSFLSEHI 921
S + C++CGK F+ +++ H T + ++C C S L++H+
Sbjct: 3 SGSSGPHKCEVCGKCFSRKDKLKTHM------RCHTGVKPYKCKTCDYAAADSSSLNKHL 56
Query: 922 NTHTGNKPYQCQICKKSFANKRSYQRDLKRHK 953
H+ +P++CQIC + N L H
Sbjct: 57 RIHSDERPFKCQICPYASRNSSQ----LTVHL 84
Score = 62.8 bits (154), Expect = 5e-12
Identities = 26/82 (31%), Positives = 41/82 (50%), Gaps = 6/82 (7%)
Query: 632 KKYECDSCNKKFWSKRALSEHMIIHTGIKEHQCHVCNTAFYHIRSLSRHLKIH--EYNES 689
++C+ C K F K L HM HTG+K ++C C+ A SL++HL+IH E
Sbjct: 7 GPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDE---- 62
Query: 690 KMYKCPVCSKMFTELYEMKRHR 711
+ +KC +C ++ H
Sbjct: 63 RPFKCQICPYASRNSSQLTVHL 84
Score = 62.8 bits (154), Expect = 6e-12
Identities = 25/92 (27%), Positives = 43/92 (46%), Gaps = 7/92 (7%)
Query: 841 CPVCHKTYSTPKSMRKHLREVHSSQKKYVCDMCGKQFTSNNRVSQHKAYSHFGIIKTIER 900
C VC K +S ++ H+R H+ K Y C C ++ +++H I + ER
Sbjct: 11 CEVCGKCFSRKDKLKTHMR-CHTGVKPYKCKTCDYAAADSSSLNKHL------RIHSDER 63
Query: 901 KFECDYCKMKFKSKSFLSEHINTHTGNKPYQC 932
F+C C ++ S L+ H+ +HTG+
Sbjct: 64 PFKCQICPYASRNSSQLTVHLRSHTGDSGPSS 95
Score = 60.1 bits (147), Expect = 5e-11
Identities = 22/61 (36%), Positives = 29/61 (47%), Gaps = 3/61 (4%)
Query: 1969 SHTGEKPFCCDICGK--SLKGNLKAHILRCQGERPYKCDVCGSSFKDKKHFSVHIRNH-G 2025
S P C++CGK S K LK H+ G +PYKC C + D + H+R H
Sbjct: 2 SSGSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSD 61
Query: 2026 E 2026
E
Sbjct: 62 E 62
Score = 59.0 bits (144), Expect = 1e-10
Identities = 25/89 (28%), Positives = 38/89 (42%), Gaps = 5/89 (5%)
Query: 1299 CPVCHKTYSTPKTMRRHLRQVHTSQKRYLCDICGKQFTSTNRVNIHKACVHSSTGNK-FE 1357
C VC K +S ++ H+R HT K Y C C ++ +N H +H + + F+
Sbjct: 11 CEVCGKCFSRKDKLKTHMR-CHTGVKPYKCKTCDYAAADSSSLNKHLR-IH--SDERPFK 66
Query: 1358 CIYCKKKYRRKFDLKEHINKHTGNKPYHC 1386
C C R L H+ HTG+
Sbjct: 67 CQICPYASRNSSQLTVHLRSHTGDSGPSS 95
Score = 58.2 bits (142), Expect = 2e-10
Identities = 24/93 (25%), Positives = 42/93 (45%), Gaps = 8/93 (8%)
Query: 1450 KCPVCHKTYSTPRQMRIHLREAHS-QKKYACDVCGKQFTSTNRVSQHKAHSHFGIIKTIQ 1508
KC VC K +S +++ H+R H+ K Y C C ++ +++H I + +
Sbjct: 10 KCEVCGKCFSRKDKLKTHMR-CHTGVKPYKCKTCDYAAADSSSLNKHL------RIHSDE 62
Query: 1509 RKFECDFCKKKFYRNFDLQEHINTHTGNKPYQC 1541
R F+C C + L H+ +HTG+
Sbjct: 63 RPFKCQICPYASRNSSQLTVHLRSHTGDSGPSS 95
Score = 56.7 bits (138), Expect = 7e-10
Identities = 22/94 (23%), Positives = 42/94 (44%), Gaps = 8/94 (8%)
Query: 571 QCPICEKIFAAPKQMRMHLRHVHSSIKRYMCDICGKQFTTLSYLDLHRKSHNETVKRKEE 630
+C +C K F+ +++ H+R H+ +K Y C C S L+ H + H++
Sbjct: 10 KCEVCGKCFSRKDKLKTHMR-CHTGVKPYKCKTCDYAAADSSSLNKHLRIHSD------- 61
Query: 631 DKKYECDSCNKKFWSKRALSEHMIIHTGIKEHQC 664
++ ++C C + L+ H+ HTG
Sbjct: 62 ERPFKCQICPYASRNSSQLTVHLRSHTGDSGPSS 95
Score = 56.7 bits (138), Expect = 7e-10
Identities = 24/96 (25%), Positives = 37/96 (38%), Gaps = 10/96 (10%)
Query: 1914 GEIPLEDTYLCDLCSKVFLEHKDMIRHREWVH-GDKCHVCKVCG--AKIKGNMKRHMLSH 1970
P + C++C K F + H H G K + CK C A ++ +H+ H
Sbjct: 5 SSGP----HKCEVCGKCFSRKDKLKTHMR-CHTGVKPYKCKTCDYAAADSSSLNKHLRIH 59
Query: 1971 TGEKPFCCDICGK--SLKGNLKAHILRCQGERPYKC 2004
+ E+PF C IC L H+ G+
Sbjct: 60 SDERPFKCQICPYASRNSSQLTVHLRSHTGDSGPSS 95
Score = 55.9 bits (136), Expect = 1e-09
Identities = 23/88 (26%), Positives = 38/88 (43%), Gaps = 8/88 (9%)
Query: 1320 HTSQKRYLCDICGKQFTSTNRVNIHKACVHSSTGNK-FECIYCKKKYRRKFDLKEHINKH 1378
S + C++CGK F+ +++ H H TG K ++C C L +H+ H
Sbjct: 3 SGSSGPHKCEVCGKCFSRKDKLKTHMR-CH--TGVKPYKCKTCDYAAADSSSLNKHLRIH 59
Query: 1379 TGNKPYHCQICKESFYTLKTYRGDLKRH 1406
+ +P+ CQIC + L H
Sbjct: 60 SDERPFKCQICPYAS----RNSSQLTVH 83
Score = 50.9 bits (123), Expect = 1e-07
Identities = 16/68 (23%), Positives = 29/68 (42%), Gaps = 19/68 (27%)
Query: 1532 THTGNKPYQCQICNKSFGTRRNYRLHLKRHKRSAGQLKPEDIH------ECKICHKIFLE 1585
+ + P++C++C K F + + LK H R H +CK C +
Sbjct: 2 SSGSSGPHKCEVCGKCF----SRKDKLKTHMR---------CHTGVKPYKCKTCDYAAAD 48
Query: 1586 NSRLTRHM 1593
+S L +H+
Sbjct: 49 SSSLNKHL 56
Score = 44.0 bits (105), Expect = 2e-05
Identities = 22/93 (23%), Positives = 38/93 (40%), Gaps = 11/93 (11%)
Query: 1889 CPICKKGFIALKHMKTHLKKHMWKAGEIPLEDTYLCDLCSKVFLEHKDMIRHREWVH-GD 1947
C +C K F +KTH++ H G P Y C C + + +H +H +
Sbjct: 11 CEVCGKCFSRKDKLKTHMRCH---TGVKP----YKCKTCDYAAADSSSLNKHLR-IHSDE 62
Query: 1948 KCHVCKVCGA--KIKGNMKRHMLSHTGEKPFCC 1978
+ C++C + + H+ SHTG+
Sbjct: 63 RPFKCQICPYASRNSSQLTVHLRSHTGDSGPSS 95
Score = 43.2 bits (103), Expect = 5e-05
Identities = 18/91 (19%), Positives = 29/91 (31%), Gaps = 17/91 (18%)
Query: 392 HNGKERKFICDICGKQFTSNIHASRH-------KNYAHSRDRQKMECDYCKRKFTCKRYL 444
C++CGK F+ H K Y +C C L
Sbjct: 3 SGS-SGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPY---------KCKTCDYAAADSSSL 52
Query: 445 AEHINAHTGNTIYGCRICKKTFLYTNGLRRH 475
+H+ H+ + C+IC ++ L H
Sbjct: 53 NKHLRIHSDERPFKCQICPYASRNSSQLTVH 83
Score = 40.9 bits (97), Expect = 3e-04
Identities = 18/97 (18%), Positives = 36/97 (37%), Gaps = 18/97 (18%)
Query: 370 QCPLCTKIFTTAKHMRVHLRSVHNGKERKFICDICGKQFTSNIHASRH-------KNYAH 422
+C +C K F+ ++ H+R H G + + C C + ++H + +
Sbjct: 10 KCEVCGKCFSRKDKLKTHMR-CHTG-VKPYKCKTCDYAAADSSSLNKHLRIHSDERPF-- 65
Query: 423 SRDRQKMECDYCKRKFTCKRYLAEHINAHTGNTIYGC 459
+C C L H+ +HTG++
Sbjct: 66 -------KCQICPYASRNSSQLTVHLRSHTGDSGPSS 95
Score = 40.5 bits (96), Expect = 4e-04
Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 5/58 (8%)
Query: 1350 SSTGNK-FECIYCKKKYRRKFDLKEHINKHTGNKPYHCQICKESFYTLKTYRGDLKRH 1406
SS + +C C K + RK LK H+ HTG KPY C+ C + L +H
Sbjct: 2 SSGSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAA----ADSSSLNKH 55
Score = 37.0 bits (87), Expect = 0.007
Identities = 24/91 (26%), Positives = 34/91 (37%), Gaps = 6/91 (6%)
Query: 1819 HVSKKKFKCDLCQKQFKASRSLQCHKQFVHLGVHKPKFLNMECDYCSRKFPSKNEVTNHI 1878
S KC++C K F L+ H H GV KP +C C + + H+
Sbjct: 3 SGSSGPHKCEVCGKCFSRKDKLKTH-MRCHTGV-KP----YKCKTCDYAAADSSSLNKHL 56
Query: 1879 KSHMGVRDILCPICKKGFIALKHMKTHLKKH 1909
+ H R C IC + HL+ H
Sbjct: 57 RIHSDERPFKCQICPYASRNSSQLTVHLRSH 87
Score = 34.3 bits (80), Expect = 0.054
Identities = 24/86 (27%), Positives = 39/86 (45%), Gaps = 7/86 (8%)
Query: 1798 CPVCNKEYATPVTMRKHLREVHVSKKKFKCDLCQKQFKASRSLQCHKQFVHLGVHKPKFL 1857
C VC K ++ ++ H+R H K +KC C S SL H +H +P
Sbjct: 11 CEVCGKCFSRKDKLKTHMR-CHTGVKPYKCKTCDYAAADSSSLNKH-LRIHSD-ERP--- 64
Query: 1858 NMECDYCSRKFPSKNEVTNHIKSHMG 1883
+C C + +++T H++SH G
Sbjct: 65 -FKCQICPYASRNSSQLTVHLRSHTG 89
Score = 31.2 bits (72), Expect = 0.61
Identities = 15/49 (30%), Positives = 21/49 (42%), Gaps = 6/49 (12%)
Query: 754 CDTCGKYFRSRQICNKHIKRVHLNPT--KTFKCDLCSDRFSTSAKLKKH 800
C TC NKH R+H + + FKC +C S++L H
Sbjct: 39 CKTCDYAAADSSSLNKH-LRIH---SDERPFKCQICPYASRNSSQLTVH 83
Score = 30.9 bits (71), Expect = 0.92
Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 7/54 (12%)
Query: 754 CDTCGKYFRSRQICNKHIKRVHLNPT--KTFKCDLCSDRFSTSAKLKKHVDKIH 805
C+ CGK F + H R H T K +KC C + S+ L KH+ +IH
Sbjct: 11 CEVCGKCFSRKDKLKTH-MRCH---TGVKPYKCKTCDYAAADSSSLNKHL-RIH 59
>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain,
structural genomics, NPPSFA; NMR {Mus musculus} SCOP:
k.12.1.1
Length = 106
Score = 99.4 bits (249), Expect = 1e-24
Identities = 32/96 (33%), Positives = 44/96 (45%), Gaps = 3/96 (3%)
Query: 1003 KGNLQKHMLSHTGEKPFCCHICGK--SLKGNLKDHILKCHTGERPYKCDVCGSSFKDKWY 1060
L +K F C CG+ + NL H + HT ERPY CD+C +F+ + +
Sbjct: 2 SSGSSGGRLPSKTKKEFICKFCGRHFTKSYNLLIH-ERTHTDERPYTCDICHKAFRRQDH 60
Query: 1061 LGVHMRKHNGEKPYNCDYCGQTFAARSTFTFHLKKH 1096
L H H+ EKP+ C CG+ F T H H
Sbjct: 61 LRDHRYIHSKEKPFKCQECGKGFCQSRTLAVHKTLH 96
Score = 92.1 bits (230), Expect = 4e-22
Identities = 32/105 (30%), Positives = 42/105 (40%), Gaps = 7/105 (6%)
Query: 977 KGSLAKHMNWVH-GDKCHICKVCGA--KIKGNLQKHMLSHTGEKPFCCHICGK--SLKGN 1031
+ K ICK CG NL H +HT E+P+ C IC K + +
Sbjct: 2 SSGSSGGRL-PSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDH 60
Query: 1032 LKDHILKCHTGERPYKCDVCGSSFKDKWYLGVHMRKHNGEKPYNC 1076
L+DH H+ E+P+KC CG F L VH H
Sbjct: 61 LRDH-RYIHSKEKPFKCQECGKGFCQSRTLAVHKTLHMQTSSPTA 104
Score = 77.1 bits (191), Expect = 8e-17
Identities = 31/137 (22%), Positives = 40/137 (29%), Gaps = 36/137 (26%)
Query: 914 KSFLSEHINTHTGNKPYQCQICKKSFANKRSYQRDLKRHKQLAGQLKPEDIHECKICHKT 973
S S K + C+ C + F K L H++ +P + C ICHK
Sbjct: 2 SSGSSGGRLPSKTKKEFICKFCGRHF-TKSYN---LLIHERTHTDERP---YTCDICHKA 54
Query: 974 FLEKGSLAKHMNWVHGDKCHICKVCGAKIKGNLQKHMLSHTGEKPFCCHICGK--SLKGN 1031
F + L H I H+ EKPF C CGK
Sbjct: 55 FRRQDHLRDHR----------------YI----------HSKEKPFKCQECGKGFCQSRT 88
Query: 1032 LKDHILKCHTGERPYKC 1048
L H H
Sbjct: 89 LAVH-KTLHMQTSSPTA 104
Score = 65.1 bits (160), Expect = 1e-12
Identities = 27/107 (25%), Positives = 47/107 (43%), Gaps = 10/107 (9%)
Query: 588 HLRHVHSSIKRYMCDICGKQFTTLSYLDLHRKSHNETVKRKEEDKKYECDSCNKKFWSKR 647
+ K ++C CG+ FT L +H ++H +++ Y CD C+K F +
Sbjct: 8 GRL-PSKTKKEFICKFCGRHFTKSYNLLIHERTHT-------DERPYTCDICHKAFRRQD 59
Query: 648 ALSEHMIIHTGIKEHQCHVCNTAFYHIRSLSRHLKIHEYNESKMYKC 694
L +H IH+ K +C C F R+L+ H +H ++
Sbjct: 60 HLRDHRYIHSKEKPFKCQECGKGFCQSRTLAVHKTLH--MQTSSPTA 104
Score = 64.4 bits (158), Expect = 2e-12
Identities = 28/100 (28%), Positives = 42/100 (42%), Gaps = 14/100 (14%)
Query: 1464 MRIHLREAHSQKKYACDVCGKQFTSTNRVSQHKAHSHFGIIKTIQRKFECDFCKKKFYRN 1523
+ K++ C CG+ FT + + H+ T +R + CD C K F R
Sbjct: 9 RLPSKTK----KEFICKFCGRHFTKSYNLLIHE------RTHTDERPYTCDICHKAFRRQ 58
Query: 1524 FDLQEHINTHTGNKPYQCQICNKSFGTRRNYRLHLKRHKR 1563
L++H H+ KP++CQ C K F L HK
Sbjct: 59 DHLRDHRYIHSKEKPFKCQECGKGF----CQSRTLAVHKT 94
Score = 63.2 bits (155), Expect = 5e-12
Identities = 28/89 (31%), Positives = 43/89 (48%), Gaps = 19/89 (21%)
Query: 1511 FECDFCKKKFYRNFDLQEHINTHTGNKPYQCQICNKSFGTRRNYRLHLKRHKRSAGQLKP 1570
F C FC + F ++++L H THT +PY C IC+K+F + HL+ H+
Sbjct: 18 FICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAF----RRQDHLRDHRY------- 66
Query: 1571 EDIH------ECKICHKIFLENSRLTRHM 1593
IH +C+ C K F ++ L H
Sbjct: 67 --IHSKEKPFKCQECGKGFCQSRTLAVHK 93
Score = 63.2 bits (155), Expect = 6e-12
Identities = 28/86 (32%), Positives = 40/86 (46%), Gaps = 5/86 (5%)
Query: 1946 GDKCHVCKVCGA--KIKGNMKRHMLSHTGEKPFCCDICGK--SLKGNLKAHILRCQGERP 2001
K +CK CG N+ H +HT E+P+ CDIC K + +L+ H E+P
Sbjct: 14 TKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKP 73
Query: 2002 YKCDVCGSSFKDKKHFSVHIRNH-GE 2026
+KC CG F + +VH H
Sbjct: 74 FKCQECGKGFCQSRTLAVHKTLHMQT 99
Score = 61.7 bits (151), Expect = 2e-11
Identities = 28/101 (27%), Positives = 44/101 (43%), Gaps = 11/101 (10%)
Query: 853 SMRKHLREVHSSQKKYVCDMCGKQFTSNNRVSQHKAYSHFGIIKTIERKFECDYCKMKFK 912
++K+++C CG+ FT + + H+ T ER + CD C F+
Sbjct: 4 GSSGGRL-PSKTKKEFICKFCGRHFTKSYNLLIHE------RTHTDERPYTCDICHKAFR 56
Query: 913 SKSFLSEHINTHTGNKPYQCQICKKSFANKRSYQRDLKRHK 953
+ L +H H+ KP++CQ C K F R L HK
Sbjct: 57 RQDHLRDHRYIHSKEKPFKCQECGKGF----CQSRTLAVHK 93
Score = 59.4 bits (145), Expect = 1e-10
Identities = 21/65 (32%), Positives = 28/65 (43%), Gaps = 3/65 (4%)
Query: 1965 RHMLSHTGEKPFCCDICGK--SLKGNLKAHILRCQGERPYKCDVCGSSFKDKKHFSVHIR 2022
L +K F C CG+ + NL H ERPY CD+C +F+ + H H
Sbjct: 7 GGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRY 66
Query: 2023 NH-GE 2026
H E
Sbjct: 67 IHSKE 71
Score = 59.0 bits (144), Expect = 1e-10
Identities = 21/92 (22%), Positives = 37/92 (40%), Gaps = 7/92 (7%)
Query: 841 CPVCHKTYSTPKSMRKHLREVHSSQKKYVCDMCGKQFTSNNRVSQHKAYSHFGIIKTIER 900
C C + ++ ++ H R H+ ++ Y CD+C K F + + H+ I + E+
Sbjct: 20 CKFCGRHFTKSYNLLIHER-THTDERPYTCDICHKAFRRQDHLRDHR------YIHSKEK 72
Query: 901 KFECDYCKMKFKSKSFLSEHINTHTGNKPYQC 932
F+C C F L+ H H
Sbjct: 73 PFKCQECGKGFCQSRTLAVHKTLHMQTSSPTA 104
Score = 57.8 bits (141), Expect = 4e-10
Identities = 26/102 (25%), Positives = 37/102 (36%), Gaps = 13/102 (12%)
Query: 612 SYLDLHRKSHNETVKRKEEDKKYECDSCNKKFWSKRALSEHMIIHTGIKEHQCHVCNTAF 671
S R K++ C C + F L H HT + + C +C+ AF
Sbjct: 3 SGSSGGRLPSKT-------KKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAF 55
Query: 672 YHIRSLSRHLKIH--EYNESKMYKCPVCSKMFTELYEMKRHR 711
L H IH E K +KC C K F + + H+
Sbjct: 56 RRQDHLRDHRYIHSKE----KPFKCQECGKGFCQSRTLAVHK 93
Score = 56.7 bits (138), Expect = 9e-10
Identities = 26/94 (27%), Positives = 39/94 (41%), Gaps = 8/94 (8%)
Query: 571 QCPICEKIFAAPKQMRMHLRHVHSSIKRYMCDICGKQFTTLSYLDLHRKSHNETVKRKEE 630
C C + F + +H R H+ + Y CDIC K F +L HR H++
Sbjct: 19 ICKFCGRHFTKSYNLLIHER-THTDERPYTCDICHKAFRRQDHLRDHRYIHSK------- 70
Query: 631 DKKYECDSCNKKFWSKRALSEHMIIHTGIKEHQC 664
+K ++C C K F R L+ H +H
Sbjct: 71 EKPFKCQECGKGFCQSRTLAVHKTLHMQTSSPTA 104
Score = 54.7 bits (133), Expect = 5e-09
Identities = 23/89 (25%), Positives = 37/89 (41%), Gaps = 5/89 (5%)
Query: 1299 CPVCHKTYSTPKTMRRHLRQVHTSQKRYLCDICGKQFTSTNRVNIHKACVHSSTGNK-FE 1357
C C + ++ + H R HT ++ Y CDIC K F + + H+ +H + K F+
Sbjct: 20 CKFCGRHFTKSYNLLIHER-THTDERPYTCDICHKAFRRQDHLRDHRY-IH--SKEKPFK 75
Query: 1358 CIYCKKKYRRKFDLKEHINKHTGNKPYHC 1386
C C K + + L H H
Sbjct: 76 CQECGKGFCQSRTLAVHKTLHMQTSSPTA 104
Score = 54.7 bits (133), Expect = 5e-09
Identities = 22/93 (23%), Positives = 39/93 (41%), Gaps = 8/93 (8%)
Query: 1450 KCPVCHKTYSTPRQMRIHLREAHS-QKKYACDVCGKQFTSTNRVSQHKAHSHFGIIKTIQ 1508
C C + ++ + IH R H+ ++ Y CD+C K F + + H+ I + +
Sbjct: 19 ICKFCGRHFTKSYNLLIHER-THTDERPYTCDICHKAFRRQDHLRDHR------YIHSKE 71
Query: 1509 RKFECDFCKKKFYRNFDLQEHINTHTGNKPYQC 1541
+ F+C C K F ++ L H H
Sbjct: 72 KPFKCQECGKGFCQSRTLAVHKTLHMQTSSPTA 104
Score = 53.6 bits (130), Expect = 1e-08
Identities = 26/94 (27%), Positives = 43/94 (45%), Gaps = 9/94 (9%)
Query: 1314 RHLRQVHTSQKRYLCDICGKQFTSTNRVNIHKACVHSSTGNK-FECIYCKKKYRRKFDLK 1372
++K ++C CG+ FT + + IH+ H T + + C C K +RR+ L+
Sbjct: 7 GGRL-PSKTKKEFICKFCGRHFTKSYNLLIHER-TH--TDERPYTCDICHKAFRRQDHLR 62
Query: 1373 EHINKHTGNKPYHCQICKESFYTLKTYRGDLKRH 1406
+H H+ KP+ CQ C + F L H
Sbjct: 63 DHRYIHSKEKPFKCQECGKGF----CQSRTLAVH 92
Score = 53.2 bits (129), Expect = 2e-08
Identities = 19/114 (16%), Positives = 38/114 (33%), Gaps = 25/114 (21%)
Query: 1900 KHMKTHLKKHMWKAGEIPLEDTYLCDLCSKVFLEHKDMIRHREWVH-GDKCHVCKVCGA- 1957
+ ++C C + F + +++ H H ++ + C +C
Sbjct: 7 GGRLPS-------KTKKE----FICKFCGRHFTKSYNLLIHER-THTDERPYTCDICHKA 54
Query: 1958 -KIKGNMKRHMLSHTGEKPFCCDICGK--SLKGNLKAHILRCQ----GERPYKC 2004
+ + +++ H H+ EKPF C CGK L H +
Sbjct: 55 FRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAVH----KTLHMQTSSPTA 104
Score = 53.2 bits (129), Expect = 2e-08
Identities = 16/74 (21%), Positives = 21/74 (28%), Gaps = 19/74 (25%)
Query: 1525 DLQEHINTHTGNKPYQCQICNKSFGTRRNYRLHLKRHKRSAGQLKPEDIH------ECKI 1578
K + C+ C + F +L H+R H C I
Sbjct: 4 GSSGGRLPSKTKKEFICKFCGRHF----TKSYNLLIHER---------THTDERPYTCDI 50
Query: 1579 CHKIFLENSRLTRH 1592
CHK F L H
Sbjct: 51 CHKAFRRQDHLRDH 64
Score = 43.6 bits (104), Expect = 4e-05
Identities = 26/97 (26%), Positives = 36/97 (37%), Gaps = 18/97 (18%)
Query: 370 QCPLCTKIFTTAKHMRVHLRSVHNGKERKFICDICGKQFTSNIHASRH-------KNYAH 422
C C + FT + ++ +H R H ER + CDIC K F H H K +
Sbjct: 19 ICKFCGRHFTKSYNLLIHER-THTD-ERPYTCDICHKAFRRQDHLRDHRYIHSKEKPF-- 74
Query: 423 SRDRQKMECDYCKRKFTCKRYLAEHINAHTGNTIYGC 459
+C C + F R LA H H +
Sbjct: 75 -------KCQECGKGFCQSRTLAVHKTLHMQTSSPTA 104
Score = 42.0 bits (100), Expect = 1e-04
Identities = 22/100 (22%), Positives = 37/100 (37%), Gaps = 18/100 (18%)
Query: 383 HMRVHLRSVHNGKERKFICDICGKQFTSNIHASRH-------KNYAHSRDRQKMECDYCK 435
+++FIC CG+ FT + + H + Y CD C
Sbjct: 4 GSSGGRL-PSKT-KKEFICKFCGRHFTKSYNLLIHERTHTDERPY---------TCDICH 52
Query: 436 RKFTCKRYLAEHINAHTGNTIYGCRICKKTFLYTNGLRRH 475
+ F + +L +H H+ + C+ C K F + L H
Sbjct: 53 KAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAVH 92
Score = 38.6 bits (91), Expect = 0.002
Identities = 22/107 (20%), Positives = 36/107 (33%), Gaps = 11/107 (10%)
Query: 1875 TNHIKSHMGVRDILCPICKKGFIALKHMKTHLKKHMWKAGEIPLEDTYLCDLCSKVFLEH 1934
+ ++ +C C + F ++ H + H E P Y CD+C K F
Sbjct: 6 SGGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTH---TDERP----YTCDICHKAFRRQ 58
Query: 1935 KDMIRHREWVH-GDKCHVCKVCGA--KIKGNMKRHMLSHTGEKPFCC 1978
+ HR +H +K C+ CG + H H
Sbjct: 59 DHLRDHRY-IHSKEKPFKCQECGKGFCQSRTLAVHKTLHMQTSSPTA 104
Score = 32.0 bits (74), Expect = 0.39
Identities = 25/105 (23%), Positives = 39/105 (37%), Gaps = 10/105 (9%)
Query: 1813 KHLREVHVSKKKFKCDLCQKQFKASRSLQCHKQFVHLGVHKPKFLNMECDYCSRKFPSKN 1872
+KK+F C C + F S +L H + H +P CD C + F ++
Sbjct: 7 GGRL-PSKTKKEFICKFCGRHFTKSYNLLIH-ERTHTD-ERP----YTCDICHKAFRRQD 59
Query: 1873 EVTNHIKSHMGVRDILCPICKKGFIALKHMKTHLKKHMWKAGEIP 1917
+ +H H + C C KGF + + H HM
Sbjct: 60 HLRDHRYIHSKEKPFKCQECGKGFCQSRTLAVHKTLHM---QTSS 101
Score = 30.5 bits (70), Expect = 1.4
Identities = 28/134 (20%), Positives = 40/134 (29%), Gaps = 45/134 (33%)
Query: 676 SLSRHLKIH--EYNESKMYKCPVCSKMFTELYEMKRHRDHKHGGKCHVCKICGATIKLFT 733
S + K + C C + FT+ Y + H H
Sbjct: 4 GSSGGRLPSKTK----KEFICKFCGRHFTKSYNLLIHE-RTHTD---------------- 42
Query: 734 ELEEKEDSSFERKKSKDSFHCDTCGKYFRSRQICNKHIKRVHLNPT--KTFKCDLCSDRF 791
E+ + CD C K FR + H + +H + K FKC C F
Sbjct: 43 ---ER------------PYTCDICHKAFRRQDHLRDH-RYIH---SKEKPFKCQECGKGF 83
Query: 792 STSAKLKKHVDKIH 805
S L H +H
Sbjct: 84 CQSRTLAVH-KTLH 96
>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET:
DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*
Length = 119
Score = 99 bits (250), Expect = 1e-24
Identities = 36/100 (36%), Positives = 48/100 (48%), Gaps = 7/100 (7%)
Query: 1003 KGNLQKHMLSHTGEKPFCCHI--CGK--SLKGNLKDHILKCHTGERPYKCDVCGSSFKDK 1058
+LQ H HTGEKP+ C C + S LK H + HTG +P++C C F
Sbjct: 21 LSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQ-RRHTGVKPFQCKTCQRKFSRS 79
Query: 1059 WYLGVHMRKHNGEKPYNCDY--CGQTFAARSTFTFHLKKH 1096
+L H R H GEKP++C + C + FA H H
Sbjct: 80 DHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH 119
Score = 85.6 bits (213), Expect = 1e-19
Identities = 31/89 (34%), Positives = 43/89 (48%), Gaps = 11/89 (12%)
Query: 1014 TGEKPFCC--HICGK--SLKGNLKDHILKCHTGERPYKCDV--CGSSFKDKWYLGVHMRK 1067
+ ++PF C C K +L+ H + HTGE+PY+CD C F L H R+
Sbjct: 2 SEKRPFMCAYPGCNKRYFKLSHLQMHS-RKHTGEKPYQCDFKDCERRFSRSDQLKRHQRR 60
Query: 1068 HNGEKPYNCDYCGQTFAARSTFTFHLKKH 1096
H G KP+ C C + F+ HLK H
Sbjct: 61 HTGVKPFQCKTCQRKFSRSD----HLKTH 85
Score = 70.6 bits (174), Expect = 2e-14
Identities = 38/122 (31%), Positives = 53/122 (43%), Gaps = 19/122 (15%)
Query: 597 KRYMCD--ICGKQFTTLSYLDLHRKSHNETVKRKEEDKKYECDS--CNKKFWSKRALSEH 652
+ +MC C K++ LS+L +H + H +K Y+CD C ++F L H
Sbjct: 5 RPFMCAYPGCNKRYFKLSHLQMHSRKHTG-------EKPYQCDFKDCERRFSRSDQLKRH 57
Query: 653 MIIHTGIKEHQCHVCNTAFYHIRSLSRHLKIH--EYNESKMYKC--PVCSKMFTELYEMK 708
HTG+K QC C F L H + H E K + C P C K F E+
Sbjct: 58 QRRHTGVKPFQCKTCQRKFSRSDHLKTHTRTHTGE----KPFSCRWPSCQKKFARSDELV 113
Query: 709 RH 710
RH
Sbjct: 114 RH 115
Score = 67.2 bits (165), Expect = 3e-13
Identities = 38/129 (29%), Positives = 60/129 (46%), Gaps = 20/129 (15%)
Query: 1475 KKYACD--VCGKQFTSTNRVSQHKAHSHFGIIKTIQRKFECDF--CKKKFYRNFDLQEHI 1530
+ + C C K++ + + H T ++ ++CDF C+++F R+ L+ H
Sbjct: 5 RPFMCAYPGCNKRYFKLSHLQMHS------RKHTGEKPYQCDFKDCERRFSRSDQLKRHQ 58
Query: 1531 NTHTGNKPYQCQICNKSFGTRRNYRLHLKRHKRSAGQLKPEDIHECKI--CHKIFLENSR 1588
HTG KP+QC+ C + F + HLK H R+ KP C+ C K F +
Sbjct: 59 RRHTGVKPFQCKTCQRKF----SRSDHLKTHTRTHTGEKP---FSCRWPSCQKKFARSDE 111
Query: 1589 LTRHMNFTH 1597
L RH N H
Sbjct: 112 LVRHHN-MH 119
Score = 67.2 bits (165), Expect = 3e-13
Identities = 39/141 (27%), Positives = 49/141 (34%), Gaps = 39/141 (27%)
Query: 1890 PICKKGFIALKHMKTHLKKHMWKAGEIPLEDTYLCDL--CSKVFLEHKDMIRHREWVHGD 1947
P C K + L H++ H +KH GE P Y CD C + F
Sbjct: 12 PGCNKRYFKLSHLQMHSRKH---TGEKP----YQCDFKDCERRFSRS------------- 51
Query: 1948 KCHVCKVCGAKIKGNMKRHMLSHTGEKPFCCDICGK--SLKGNLKAHILRCQGERPYKCD 2005
+KRH HTG KPF C C + S +LK H GE+P+ C
Sbjct: 52 -------------DQLKRHQRRHTGVKPFQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCR 98
Query: 2006 V--CGSSFKDKKHFSVHIRNH 2024
C F H H
Sbjct: 99 WPSCQKKFARSDELVRHHNMH 119
Score = 65.2 bits (160), Expect = 1e-12
Identities = 35/116 (30%), Positives = 57/116 (49%), Gaps = 15/116 (12%)
Query: 842 PVCHKTYSTPKSMRKHLREVHSSQKKYVCDM--CGKQFTSNNRVSQHKAYSHFGIIKTIE 899
P C+K Y ++ H R H+ +K Y CD C ++F+ ++++ +H+ T
Sbjct: 12 PGCNKRYFKLSHLQMHSR-KHTGEKPYQCDFKDCERRFSRSDQLKRHQ------RRHTGV 64
Query: 900 RKFECDYCKMKFKSKSFLSEHINTHTGNKPYQCQI--CKKSFANKRSYQRDLKRHK 953
+ F+C C+ KF L H THTG KP+ C+ C+K F + +L RH
Sbjct: 65 KPFQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKF----ARSDELVRHH 116
Score = 62.5 bits (153), Expect = 1e-11
Identities = 38/112 (33%), Positives = 59/112 (52%), Gaps = 13/112 (11%)
Query: 1300 PVCHKTYSTPKTMRRHLRQVHTSQKRYLCDI--CGKQFTSTNRVNIHKACVHSSTGNK-F 1356
P C+K Y ++ H R HT +K Y CD C ++F+ ++++ H+ H TG K F
Sbjct: 12 PGCNKRYFKLSHLQMHSR-KHTGEKPYQCDFKDCERRFSRSDQLKRHQR-RH--TGVKPF 67
Query: 1357 ECIYCKKKYRRKFDLKEHINKHTGNKPYHCQI--CKESFYTLKTYRGDLKRH 1406
+C C++K+ R LK H HTG KP+ C+ C++ F +L RH
Sbjct: 68 QCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKF----ARSDELVRH 115
Score = 61.8 bits (151), Expect = 2e-11
Identities = 33/125 (26%), Positives = 53/125 (42%), Gaps = 19/125 (15%)
Query: 866 KKYVCD--MCGKQFTSNNRVSQHKAYSHFGIIKTIERKFECDY--CKMKFKSKSFLSEHI 921
+ ++C C K++ + + H T E+ ++CD+ C+ +F L H
Sbjct: 5 RPFMCAYPGCNKRYFKLSHLQMHS------RKHTGEKPYQCDFKDCERRFSRSDQLKRHQ 58
Query: 922 NTHTGNKPYQCQICKKSFANKRSYQRDLKRHKQLAGQLKPEDIHECKI--CHKTFLEKGS 979
HTG KP+QC+ C++ F S LK H + KP C+ C K F
Sbjct: 59 RRHTGVKPFQCKTCQRKF----SRSDHLKTHTRTHTGEKP---FSCRWPSCQKKFARSDE 111
Query: 980 LAKHM 984
L +H
Sbjct: 112 LVRHH 116
Score = 48.7 bits (117), Expect = 9e-07
Identities = 25/91 (27%), Positives = 47/91 (51%), Gaps = 12/91 (13%)
Query: 1321 TSQKRYLCD--ICGKQFTSTNRVNIHKACVHSSTGNK-FECIY--CKKKYRRKFDLKEHI 1375
+ ++ ++C C K++ + + +H H TG K ++C + C++++ R LK H
Sbjct: 2 SEKRPFMCAYPGCNKRYFKLSHLQMHSR-KH--TGEKPYQCDFKDCERRFSRSDQLKRHQ 58
Query: 1376 NKHTGNKPYHCQICKESFYTLKTYRGDLKRH 1406
+HTG KP+ C+ C+ F + LK H
Sbjct: 59 RRHTGVKPFQCKTCQRKF----SRSDHLKTH 85
Score = 48.7 bits (117), Expect = 1e-06
Identities = 34/115 (29%), Positives = 53/115 (46%), Gaps = 22/115 (19%)
Query: 372 PLCTKIFTTAKHMRVHLRSVHNGKERKFICDI--CGKQFTSNIHASRH-------KNYAH 422
P C K + H+++H R H G E+ + CD C ++F+ + RH K +
Sbjct: 12 PGCNKRYFKLSHLQMHSR-KHTG-EKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPF-- 67
Query: 423 SRDRQKMECDYCKRKFTCKRYLAEHINAHTGNTIYGCRI--CKKTFLYTNGLRRH 475
+C C+RKF+ +L H HTG + CR C+K F ++ L RH
Sbjct: 68 -------QCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRH 115
Score = 48.3 bits (116), Expect = 1e-06
Identities = 19/63 (30%), Positives = 27/63 (42%), Gaps = 7/63 (11%)
Query: 1971 TGEKPFCCD--ICGK--SLKGNLKAHILRCQGERPYKCDV--CGSSFKDKKHFSVHIRNH 2024
+ ++PF C C K +L+ H + GE+PY+CD C F H R H
Sbjct: 2 SEKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRH 61
Query: 2025 -GE 2026
G
Sbjct: 62 TGV 64
Score = 47.9 bits (115), Expect = 2e-06
Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 12/85 (14%)
Query: 575 CEKIFAAPKQMRMHLRHVHSSIKRYMCDICGKQFTTLSYLDLHRKSH-NETVKRKEEDKK 633
CE+ F+ Q++ H R H+ +K + C C ++F+ +L H ++H E K
Sbjct: 44 CERRFSRSDQLKRHQR-RHTGVKPFQCKTCQRKFSRSDHLKTHTRTHTGE--------KP 94
Query: 634 YECDS--CNKKFWSKRALSEHMIIH 656
+ C C KKF L H +H
Sbjct: 95 FSCRWPSCQKKFARSDELVRHHNMH 119
Score = 41.7 bits (99), Expect = 2e-04
Identities = 26/80 (32%), Positives = 41/80 (51%), Gaps = 7/80 (8%)
Query: 1302 CHKTYSTPKTMRRHLRQVHTSQKRYLCDICGKQFTSTNRVNIHKACVHSSTGNK-FECIY 1360
C + +S ++RH R HT K + C C ++F+ ++ + H H TG K F C +
Sbjct: 44 CERRFSRSDQLKRHQR-RHTGVKPFQCKTCQRKFSRSDHLKTHTR-TH--TGEKPFSCRW 99
Query: 1361 --CKKKYRRKFDLKEHINKH 1378
C+KK+ R +L H N H
Sbjct: 100 PSCQKKFARSDELVRHHNMH 119
Score = 41.7 bits (99), Expect = 2e-04
Identities = 36/115 (31%), Positives = 55/115 (47%), Gaps = 11/115 (9%)
Query: 1799 PVCNKEYATPVTMRKHLREVHVSKKKFKCDL--CQKQFKASRSLQCHKQFVHLGVHKPKF 1856
P CNK Y ++ H R H +K ++CD C+++F S L+ H++ H GV KP
Sbjct: 12 PGCNKRYFKLSHLQMHSR-KHTGEKPYQCDFKDCERRFSRSDQLKRHQR-RHTGV-KP-- 66
Query: 1857 LNMECDYCSRKFPSKNEVTNHIKSHMGVRDILC--PICKKGFIALKHMKTHLKKH 1909
+C C RKF + + H ++H G + C P C+K F + H H
Sbjct: 67 --FQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH 119
Score = 41.7 bits (99), Expect = 3e-04
Identities = 36/155 (23%), Positives = 59/155 (38%), Gaps = 48/155 (30%)
Query: 1351 STGNK-FEC--IYCKKKYRRKFDLKEHINKHTGNKPYHCQI--CKESFYTLKTYRGDLKR 1405
++ + F C C K+Y + L+ H KHTG KPY C C+ F + LKR
Sbjct: 1 ASEKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRF----SRSDQLKR 56
Query: 1406 HEQLAEQSDEMHSTSKFQNKIKKPLDTGDLSWEEWNELVLSGTK--KCPVCHKTYSTPRQ 1463
H++ H TG K +C C + +S
Sbjct: 57 HQR-------RH--------------TGV--------------KPFQCKTCQRKFSRSDH 81
Query: 1464 MRIHLREAHSQKKYACDV--CGKQFTSTNRVSQHK 1496
++ H R +K ++C C K+F ++ + +H
Sbjct: 82 LKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHH 116
Score = 39.8 bits (94), Expect = 0.001
Identities = 36/159 (22%), Positives = 55/159 (34%), Gaps = 51/159 (32%)
Query: 657 TGIKEHQC--HVCNTAFYHIRSLSRHLKIH--EYNESKMYKCPV--CSKMFTELYEMKRH 710
+ + C CN ++ + L H + H E K Y+C C + F+ ++KRH
Sbjct: 2 SEKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGE----KPYQCDFKDCERRFSRSDQLKRH 57
Query: 711 RDHKHGGKCHVCKICGATIKLFTELEEKEDSSFERKKSKDSFHCDTCGKYFRSRQICNKH 770
+ +H G K F C TC + F H
Sbjct: 58 Q-RRHTG-------------------VK------------PFQCKTCQRKFSRSDHLKTH 85
Query: 771 IKRVHLNPT--KTFKCDL--CSDRFSTSAKLKKHVDKIH 805
R H T K F C C +F+ S +L +H +H
Sbjct: 86 -TRTH---TGEKPFSCRWPSCQKKFARSDELVRHH-NMH 119
Score = 39.8 bits (94), Expect = 0.001
Identities = 37/124 (29%), Positives = 56/124 (45%), Gaps = 19/124 (15%)
Query: 1823 KKFKCD--LCQKQFKASRSLQCHKQFVHLGVHKPKFLNMECDY--CSRKFPSKNEVTNHI 1878
+ F C C K++ LQ H H G KP +CD+ C R+F +++ H
Sbjct: 5 RPFMCAYPGCNKRYFKLSHLQMH-SRKHTG-EKP----YQCDFKDCERRFSRSDQLKRHQ 58
Query: 1879 KSHMGVRDILCPICKKGFIALKHMKTHLKKHMWKAGEIPLEDTYLCDL--CSKVFLEHKD 1936
+ H GV+ C C++ F H+KTH + H GE P + C C K F +
Sbjct: 59 RRHTGVKPFQCKTCQRKFSRSDHLKTHTRTH---TGEKP----FSCRWPSCQKKFARSDE 111
Query: 1937 MIRH 1940
++RH
Sbjct: 112 LVRH 115
Score = 37.1 bits (87), Expect = 0.008
Identities = 16/70 (22%), Positives = 25/70 (35%), Gaps = 23/70 (32%)
Query: 1534 TGNKPYQC--QICNKSFGTRRNYRLHLKRHKRSAGQLKPEDIH--------ECKICHKIF 1583
+ +P+ C CNK + HL+ H R H + K C + F
Sbjct: 2 SEKRPFMCAYPGCNKRY----FKLSHLQMHSR---------KHTGEKPYQCDFKDCERRF 48
Query: 1584 LENSRLTRHM 1593
+ +L RH
Sbjct: 49 SRSDQLKRHQ 58
Score = 37.1 bits (87), Expect = 0.010
Identities = 32/141 (22%), Positives = 51/141 (36%), Gaps = 44/141 (31%)
Query: 755 DTCGKYFRSRQICNKHIKRVHLNPT--KTFKCDL--CSDRFSTSAKLKKHVDKIHFTPEF 810
C K + H R H T K ++CD C RFS S +LK+H + H
Sbjct: 12 PGCNKRYFKLSHLQMH-SRKH---TGEKPYQCDFKDCERRFSRSDQLKRHQ-RRH----- 61
Query: 811 QEPSKKNEPLDTGD--YTLEQWNELVTAQSKDCPVCHKTYSTPKSMRKHLREVHSSQKKY 868
TG + C C + +S ++ H R H+ +K +
Sbjct: 62 -----------TGVKPFQ--------------CKTCQRKFSRSDHLKTHTR-THTGEKPF 95
Query: 869 VCDM--CGKQFTSNNRVSQHK 887
C C K+F ++ + +H
Sbjct: 96 SCRWPSCQKKFARSDELVRHH 116
Score = 35.6 bits (83), Expect = 0.032
Identities = 24/92 (26%), Positives = 40/92 (43%), Gaps = 20/92 (21%)
Query: 396 ERKFICD--ICGKQFTSNIHASRH-------KNYAHSRDRQKMECDY--CKRKFTCKRYL 444
+R F+C C K++ H H K Y +CD+ C+R+F+ L
Sbjct: 4 KRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPY---------QCDFKDCERRFSRSDQL 54
Query: 445 AEHINAHTGNTIYGCRICKKTFLYTNGLRRHI 476
H HTG + C+ C++ F ++ L+ H
Sbjct: 55 KRHQRRHTGVKPFQCKTCQRKFSRSDHLKTHT 86
Score = 35.2 bits (82), Expect = 0.046
Identities = 20/85 (23%), Positives = 33/85 (38%), Gaps = 16/85 (18%)
Query: 374 CTKIFTTAKHMRVHLRSVHNGKERKFICDICGKQFTSNIHASRH-------KNYAHSRDR 426
C + F+ + ++ H R H G + F C C ++F+ + H H K +
Sbjct: 44 CERRFSRSDQLKRHQR-RHTG-VKPFQCKTCQRKFSRSDHLKTHTRTHTGEKPF------ 95
Query: 427 QKMECDYCKRKFTCKRYLAEHINAH 451
C++KF L H N H
Sbjct: 96 -SCRWPSCQKKFARSDELVRHHNMH 119
Score = 31.7 bits (73), Expect = 0.67
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 4/51 (7%)
Query: 370 QCPLCTKIFTTAKHMRVHLRSVHNGKERKFICDI--CGKQFTSNIHASRHK 418
QC C + F+ + H++ H R H G E+ F C C K+F + RH
Sbjct: 68 QCKTCQRKFSRSDHLKTHTR-THTG-EKPFSCRWPSCQKKFARSDELVRHH 116
Score = 31.3 bits (72), Expect = 0.95
Identities = 13/49 (26%), Positives = 23/49 (46%), Gaps = 3/49 (6%)
Query: 1299 CPVCHKTYSTPKTMRRHLRQVHTSQKRYLCDI--CGKQFTSTNRVNIHK 1345
C C + +S ++ H R HT +K + C C K+F ++ + H
Sbjct: 69 CKTCQRKFSRSDHLKTHTR-THTGEKPFSCRWPSCQKKFARSDELVRHH 116
>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
g.37.1.1 g.37.1.1
Length = 86
Score = 93.7 bits (234), Expect = 5e-23
Identities = 21/86 (24%), Positives = 31/86 (36%), Gaps = 7/86 (8%)
Query: 1004 GNLQKHMLSHTGEKPFCCHICGK--SLKGNLKDHILKCHTGE----RPYKCDVCGSSFKD 1057
G+ +HTGEKP+ C C K K L H K + + C CG +F
Sbjct: 1 GSSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMH-FKRYHDPNFVPAAFVCSKCGKTFTR 59
Query: 1058 KWYLGVHMRKHNGEKPYNCDYCGQTF 1083
+ + H G + G +
Sbjct: 60 RNTMARHADNCAGPDGVEGENSGPSS 85
Score = 70.2 bits (173), Expect = 1e-14
Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 5/71 (7%)
Query: 1030 GNLKDHILKCHTGERPYKCDVCGSSFKDKWYLGVHMRKHNGE----KPYNCDYCGQTFAA 1085
G+ + HTGE+PY C C +F+ K L +H ++++ + C CG+TF
Sbjct: 1 GSSGSSG-RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTR 59
Query: 1086 RSTFTFHLKKH 1096
R+T H
Sbjct: 60 RNTMARHADNC 70
Score = 67.2 bits (165), Expect = 1e-13
Identities = 24/111 (21%), Positives = 33/111 (29%), Gaps = 29/111 (26%)
Query: 917 LSEHINTHTGNKPYQCQICKKSFANKRSYQRDLKRHKQLAGQLKPEDIHECKICHKTFLE 976
THTG KPY C C K+F K+ KR+ C C KTF
Sbjct: 3 SGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAA---FVCSKCGKTFTR 59
Query: 977 KGSLAKHMNWVHGDKCHICKVCGAKIKGNLQKHMLSHTGEKPFCCHICGKS 1027
+ ++A+H + + G G S
Sbjct: 60 RNTMARHAD--------------------------NCAGPDGVEGENSGPS 84
Score = 62.5 bits (153), Expect = 5e-12
Identities = 21/86 (24%), Positives = 28/86 (32%), Gaps = 6/86 (6%)
Query: 1464 MRIHLREAHSQKKYACDVCGKQFTSTNRVSQHKAHSHFGIIKTIQRKFECDFCKKKFYRN 1523
R H E K YAC C K F + H + + F C C K F R
Sbjct: 7 GRTHTGE----KPYACSHCDKTFRQKQLLDMHF-KRYHDP-NFVPAAFVCSKCGKTFTRR 60
Query: 1524 FDLQEHINTHTGNKPYQCQICNKSFG 1549
+ H + G + + S G
Sbjct: 61 NTMARHADNCAGPDGVEGENSGPSSG 86
Score = 60.6 bits (148), Expect = 2e-11
Identities = 22/74 (29%), Positives = 29/74 (39%), Gaps = 7/74 (9%)
Query: 1961 GNMKRHMLSHTGEKPFCCDICGK--SLKGNLKAHILRCQGE----RPYKCDVCGSSFKDK 2014
G+ +HTGEKP+ C C K K L H R + C CG +F +
Sbjct: 1 GSSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRR 60
Query: 2015 KHFSVHIRNH-GED 2027
+ H N G D
Sbjct: 61 NTMARHADNCAGPD 74
Score = 59.1 bits (144), Expect = 8e-11
Identities = 20/68 (29%), Positives = 28/68 (41%), Gaps = 3/68 (4%)
Query: 1526 LQEHINTHTGNKPYQCQICNKSFGTRRNYRLHLKRHKRSAGQLKPEDIHECKICHKIFLE 1585
THTG KPY C C+K+F ++ +H KR+ C C K F
Sbjct: 3 SGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAA---FVCSKCGKTFTR 59
Query: 1586 NSRLTRHM 1593
+ + RH
Sbjct: 60 RNTMARHA 67
Score = 57.5 bits (140), Expect = 3e-10
Identities = 17/87 (19%), Positives = 29/87 (33%), Gaps = 3/87 (3%)
Query: 853 SMRKHLREVHSSQKKYVCDMCGKQFTSNNRVSQHKAYSHFGIIKTIERKFECDYCKMKFK 912
S R H+ +K Y C C K F + H + + F C C F
Sbjct: 2 SSGSSGR-THTGEKPYACSHCDKTFRQKQLLDMHFK-RYHDP-NFVPAAFVCSKCGKTFT 58
Query: 913 SKSFLSEHINTHTGNKPYQCQICKKSF 939
++ ++ H + G + + S
Sbjct: 59 RRNTMARHADNCAGPDGVEGENSGPSS 85
Score = 56.4 bits (137), Expect = 7e-10
Identities = 21/80 (26%), Positives = 28/80 (35%), Gaps = 2/80 (2%)
Query: 649 LSEHMIIHTGIKEHQCHVCNTAFYHIRSLSRHLKIH--EYNESKMYKCPVCSKMFTELYE 706
HTG K + C C+ F + L H K + + C C K FT
Sbjct: 3 SGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNT 62
Query: 707 MKRHRDHKHGGKCHVCKICG 726
M RH D+ G + G
Sbjct: 63 MARHADNCAGPDGVEGENSG 82
Score = 56.0 bits (136), Expect = 9e-10
Identities = 18/86 (20%), Positives = 29/86 (33%), Gaps = 4/86 (4%)
Query: 586 RMHLRHVHSSIKRYMCDICGKQFTTLSYLDLHRKSHNETVKRKEEDKKYECDSCNKKFWS 645
R H+ K Y C C K F LD+H K +++ + C C K F
Sbjct: 4 GSSGR-THTGEKPYACSHCDKTFRQKQLLDMHFKRYHDP---NFVPAAFVCSKCGKTFTR 59
Query: 646 KRALSEHMIIHTGIKEHQCHVCNTAF 671
+ ++ H G + +
Sbjct: 60 RNTMARHADNCAGPDGVEGENSGPSS 85
Score = 53.3 bits (129), Expect = 9e-09
Identities = 16/74 (21%), Positives = 26/74 (35%), Gaps = 8/74 (10%)
Query: 1946 GDKCHVCKVCGA--KIKGNMKRHMLSHTGE----KPFCCDICGK--SLKGNLKAHILRCQ 1997
G+K + C C + K + H + F C CGK + + + H C
Sbjct: 12 GEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCA 71
Query: 1998 GERPYKCDVCGSSF 2011
G + + G S
Sbjct: 72 GPDGVEGENSGPSS 85
Score = 52.1 bits (126), Expect = 3e-08
Identities = 18/84 (21%), Positives = 29/84 (34%), Gaps = 5/84 (5%)
Query: 1313 RRHLRQVHTSQKRYLCDICGKQFTSTNRVNIHKACVHS--STGNK-FECIYCKKKYRRKF 1369
R HT +K Y C C K F +++H + + F C C K + R+
Sbjct: 4 GSSGR-THTGEKPYACSHCDKTFRQKQLLDMHFK-RYHDPNFVPAAFVCSKCGKTFTRRN 61
Query: 1370 DLKEHINKHTGNKPYHCQICKESF 1393
+ H + G + S
Sbjct: 62 TMARHADNCAGPDGVEGENSGPSS 85
Score = 49.4 bits (119), Expect = 2e-07
Identities = 23/92 (25%), Positives = 31/92 (33%), Gaps = 19/92 (20%)
Query: 1900 KHMKTHLKKHMWKAGEIPLEDTYLCDLCSKVFLEHKDMIRHREWVHG----DKCHVCKVC 1955
+TH GE P Y C C K F + + + H + H VC C
Sbjct: 5 SSGRTH-------TGEKP----YACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKC 53
Query: 1956 GAKI---KGNMKRHMLSHTGEKPFCCDICGKS 1984
G K + M RH + G + G S
Sbjct: 54 G-KTFTRRNTMARHADNCAGPDGVEGENSGPS 84
Score = 48.3 bits (116), Expect = 6e-07
Identities = 15/84 (17%), Positives = 27/84 (32%), Gaps = 11/84 (13%)
Query: 895 IKTIERKFECDYCKMKFKSKSFLSEHINTHTG----NKPYQCQICKKSFANKRSYQRDLK 950
T E+ + C +C F+ K L H + + C C K+F + + +
Sbjct: 9 THTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNT----MA 64
Query: 951 RHKQLAGQLKPEDIHECKICHKTF 974
RH E + +
Sbjct: 65 RHADNCAGPDG---VEGENSGPSS 85
Score = 42.5 bits (101), Expect = 7e-05
Identities = 16/87 (18%), Positives = 24/87 (27%), Gaps = 6/87 (6%)
Query: 383 HMRVHLRSVHNGKERKFICDICGKQFTSNIHASRHKNYAHSRDRQKM---ECDYCKRKFT 439
R H G E+ + C C K F H + C C + FT
Sbjct: 2 SSGSSGR-THTG-EKPYACSHCDKTFRQKQLLDMHFK-RYHDPNFVPAAFVCSKCGKTFT 58
Query: 440 CKRYLAEHINAHTGNTIYGCRICKKTF 466
+ +A H + G +
Sbjct: 59 RRNTMARHADNCAGPDGVEGENSGPSS 85
Score = 35.2 bits (82), Expect = 0.020
Identities = 19/116 (16%), Positives = 28/116 (24%), Gaps = 33/116 (28%)
Query: 1371 LKEHINKHTGNKPYHCQICKESFYTLKTYRGDLKRHEQLAEQSDEMHSTSKFQNKIKKPL 1430
HTG KPY C C ++F + L H + + N +
Sbjct: 3 SGSSGRTHTGEKPYACSHCDKTF----RQKQLLDMHFK-------RYHD---PNFVPAAF 48
Query: 1431 DTGDLSWEEWNELVLSGTKKCPVCHKTYSTPRQMRIHLREAHSQKKYACDVCGKQF 1486
C C KT++ M H + G
Sbjct: 49 -------------------VCSKCGKTFTRRNTMARHADNCAGPDGVEGENSGPSS 85
Score = 33.3 bits (77), Expect = 0.10
Identities = 14/98 (14%), Positives = 23/98 (23%), Gaps = 26/98 (26%)
Query: 780 KTFKCDLCSDRFSTSAKLKKHVDKIHFTPEFQEPSKKNEPLDTGDYTLEQWNELVTAQSK 839
K + C C F L H K + +
Sbjct: 14 KPYACSHCDKTFRQKQLLDMH-FKRY----------------HD--------PNFVPAAF 48
Query: 840 DCPVCHKTYSTPKSMRKHLREVHSSQKKYVCDMCGKQF 877
C C KT++ +M +H + + G
Sbjct: 49 VCSKCGKTFTRRNTMARHAD-NCAGPDGVEGENSGPSS 85
Score = 33.3 bits (77), Expect = 0.12
Identities = 9/37 (24%), Positives = 12/37 (32%), Gaps = 1/37 (2%)
Query: 1299 CPVCHKTYSTPKTMRRHLRQVHTSQKRYLCDICGKQF 1335
C C KT++ TM RH + G
Sbjct: 50 CSKCGKTFTRRNTMARHAD-NCAGPDGVEGENSGPSS 85
Score = 32.1 bits (74), Expect = 0.25
Identities = 16/90 (17%), Positives = 23/90 (25%), Gaps = 20/90 (22%)
Query: 319 FECQHCEDKFSTPFELNKHNESKHEKGRKLNPETGGYTYEEYKEVVVSKSKQCPLCTKIF 378
+ C HC+ F L+ H ++ V + C C K F
Sbjct: 16 YACSHCDKTFRQKQLLDMH-FKRY---------HD--------PNFVPAAFVCSKCGKTF 57
Query: 379 TTAKHMRVHLRSVHNGKERKFICDICGKQF 408
T M H G + G
Sbjct: 58 TRRNTMARHAD-NCAG-PDGVEGENSGPSS 85
Score = 32.1 bits (74), Expect = 0.27
Identities = 12/52 (23%), Positives = 21/52 (40%), Gaps = 4/52 (7%)
Query: 752 FHCDTCGKYFRSRQICNKHIKRVH---LNPTKTFKCDLCSDRFSTSAKLKKH 800
+ C C K FR +Q+ + H + + F C C F+ + +H
Sbjct: 16 YACSHCDKTFRQKQLLDMH-FKRYHDPNFVPAAFVCSKCGKTFTRRNTMARH 66
Score = 31.3 bits (72), Expect = 0.58
Identities = 16/88 (18%), Positives = 27/88 (30%), Gaps = 9/88 (10%)
Query: 1812 RKHLREVHVSKKKFKCDLCQKQFKASRSLQCHKQFVHLG---VHKPKFLNMECDYCSRKF 1868
R H +K + C C K F+ + L H + + V C C + F
Sbjct: 4 GSSGR-THTGEKPYACSHCDKTFRQKQLLDMHFK-RYHDPNFVPAA----FVCSKCGKTF 57
Query: 1869 PSKNEVTNHIKSHMGVRDILCPICKKGF 1896
+N + H + G +
Sbjct: 58 TRRNTMARHADNCAGPDGVEGENSGPSS 85
>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain
containing protein 22B, structural genomics, NPPSFA; NMR
{Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Length = 110
Score = 94.0 bits (235), Expect = 1e-22
Identities = 27/90 (30%), Positives = 41/90 (45%), Gaps = 5/90 (5%)
Query: 1003 KGNLQKHMLSHTGEKPFCCHICGK--SLKGNLKDHILKCHTGERPYKCDVCGSSFKDKWY 1060
K +HM H G +P+ C +CGK +K +L H +K HTG +PY+C++C F +
Sbjct: 22 KSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGH-MKIHTGIKPYECNICAKRFMWRDS 80
Query: 1061 LGVHMRKHNGEKPYNCDYCGQTFAARSTFT 1090
H + K Y Q S +
Sbjct: 81 F--HRHVTSCTKSYEAAKAEQNTTEASGPS 108
Score = 90.6 bits (226), Expect = 1e-21
Identities = 33/80 (41%), Positives = 43/80 (53%), Gaps = 4/80 (5%)
Query: 1012 SHTGEKPFCCHICGK--SLKGNLKDHILKCHTGERPYKCDVCGSSFKDKWYLGVHMRKHN 1069
+G+K + C CGK + K H + H G RPY C VCG FK K +L HM+ H
Sbjct: 4 GSSGDKLYPCQ-CGKSFTHKSQRDRH-MSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHT 61
Query: 1070 GEKPYNCDYCGQTFAARSTF 1089
G KPY C+ C + F R +F
Sbjct: 62 GIKPYECNICAKRFMWRDSF 81
Score = 84.0 bits (209), Expect = 3e-19
Identities = 35/138 (25%), Positives = 52/138 (37%), Gaps = 39/138 (28%)
Query: 923 THTGNKPYQCQICKKSFANKRSYQRDLKRHKQLAGQLKPEDIHECKICHKTFLEKGSLAK 982
+G+K Y CQ C KSF +K RH + L+P + C +C K F K L
Sbjct: 4 GSSGDKLYPCQ-CGKSFTHKSQ----RDRHMSMHLGLRP---YGCGVCGKKFKMKHHLVG 55
Query: 983 HMNWVHGDKCHICKVCGAKIKGNLQKHMLSHTGEKPFCCHICGK--SLKGNLKDHILKCH 1040
HM KI HTG KP+ C+IC K + + H+
Sbjct: 56 HM----------------KI----------HTGIKPYECNICAKRFMWRDSFHRHV---T 86
Query: 1041 TGERPYKCDVCGSSFKDK 1058
+ + Y+ + +
Sbjct: 87 SCTKSYEAAKAEQNTTEA 104
Score = 69.8 bits (172), Expect = 3e-14
Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Query: 1040 HTGERPYKCDVCGSSFKDKWYLGVHMRKHNGEKPYNCDYCGQTFAARSTFTFHLKKH 1096
+G++ Y C CG SF K HM H G +PY C CG+ F + H+K H
Sbjct: 5 SSGDKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 60
Score = 67.5 bits (166), Expect = 2e-13
Identities = 39/114 (34%), Positives = 47/114 (41%), Gaps = 16/114 (14%)
Query: 592 VHSSIKRYMCDICGKQFTTLSYLDLHRKSHNETVKRKEEDKKYECDSCNKKFWSKRALSE 651
S K Y C CGK FT S D H H + Y C C KKF K L
Sbjct: 4 GSSGDKLYPCQ-CGKSFTHKSQRDRHMSMHLG-------LRPYGCGVCGKKFKMKHHLVG 55
Query: 652 HMIIHTGIKEHQCHVCNTAFYHIRSLSRHLKIH--EYNESKMYKCPVCSKMFTE 703
HM IHTGIK ++C++C F S RH + K Y+ + TE
Sbjct: 56 HMKIHTGIKPYECNICAKRFMWRDSFHRH--VTSCT----KSYEAAKAEQNTTE 103
Score = 67.1 bits (165), Expect = 2e-13
Identities = 33/127 (25%), Positives = 45/127 (35%), Gaps = 20/127 (15%)
Query: 1464 MRIHLREAHSQKKYACDVCGKQFTSTNRVSQHKAHSHFGIIKTIQRKFECDFCKKKFYRN 1523
+ K Y C CGK FT ++ +H + R + C C KKF
Sbjct: 2 SSGSSGD----KLYPCQ-CGKSFTHKSQRDRHM------SMHLGLRPYGCGVCGKKFKMK 50
Query: 1524 FDLQEHINTHTGNKPYQCQICNKSFGTRRNYRLHLKRHKRSAGQLKPEDIHECKICHKIF 1583
L H+ HTG KPY+C IC K F H + K +E +
Sbjct: 51 HHLVGHMKIHTGIKPYECNICAKRF--MWRDSFHRHVT---SCT-KS---YEAAKAEQNT 101
Query: 1584 LENSRLT 1590
E S +
Sbjct: 102 TEASGPS 108
Score = 66.7 bits (164), Expect = 3e-13
Identities = 34/127 (26%), Positives = 46/127 (36%), Gaps = 28/127 (22%)
Query: 861 VHSSQKKYVCDMCGKQFTSNNRVSQHKAYSHFGIIKTIERKFECDYCKMKFKSKSFLSEH 920
S K Y C CGK FT ++ +H + R + C C KFK K L H
Sbjct: 4 GSSGDKLYPCQ-CGKSFTHKSQRDRHM------SMHLGLRPYGCGVCGKKFKMKHHLVGH 56
Query: 921 INTHTGNKPYQCQICKKSFANKRSYQRDLKRHKQLAGQLKPEDIH------ECKICHKTF 974
+ HTG KPY+C IC K F ++ RH + E +
Sbjct: 57 MKIHTGIKPYECNICAKRF----MWRDSFHRH-----------VTSCTKSYEAAKAEQNT 101
Query: 975 LEKGSLA 981
E +
Sbjct: 102 TEASGPS 108
Score = 61.7 bits (151), Expect = 2e-11
Identities = 29/102 (28%), Positives = 44/102 (43%), Gaps = 9/102 (8%)
Query: 1922 YLCDLCSKVFLEHKDMIRHREWVH-GDKCHVCKVCGA--KIKGNMKRHMLSHTGEKPFCC 1978
Y C C K F RH +H G + + C VCG K+K ++ HM HTG KP+ C
Sbjct: 11 YPCQ-CGKSFTHKSQRDRHMS-MHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYEC 68
Query: 1979 DICGK--SLKGNLKAHILRCQGERPYKCDVCGSSFKDKKHFS 2018
+IC K + + H+ + Y+ + + S
Sbjct: 69 NICAKRFMWRDSFHRHVT--SCTKSYEAAKAEQNTTEASGPS 108
Score = 60.1 bits (147), Expect = 6e-11
Identities = 26/83 (31%), Positives = 37/83 (44%), Gaps = 8/83 (9%)
Query: 1511 FECDFCKKKFYRNFDLQEHINTHTGNKPYQCQICNKSFGTRRNYRLHLKRHKRSAGQLKP 1570
+ C C K F H++ H G +PY C +C K F + HL H + +KP
Sbjct: 11 YPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKF----KMKHHLVGHMKIHTGIKP 65
Query: 1571 EDIHECKICHKIFLENSRLTRHM 1593
+EC IC K F+ RH+
Sbjct: 66 ---YECNICAKRFMWRDSFHRHV 85
Score = 57.8 bits (141), Expect = 5e-10
Identities = 23/93 (24%), Positives = 43/93 (46%), Gaps = 7/93 (7%)
Query: 1302 CHKTYSTPKTMRRHLRQVHTSQKRYLCDICGKQFTSTNRVNIHKACVHSSTGNK-FECIY 1360
C K+++ RH+ +H + Y C +CGK+F + + H +H TG K +EC
Sbjct: 15 CGKSFTHKSQRDRHMS-MHLGLRPYGCGVCGKKFKMKHHLVGHMK-IH--TGIKPYECNI 70
Query: 1361 CKKKYRRKFDLKEHINKHTGNKPYHCQICKESF 1393
C K++ + H+ + K Y +++
Sbjct: 71 CAKRFMWRDSFHRHV--TSCTKSYEAAKAEQNT 101
Score = 56.3 bits (137), Expect = 2e-09
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 5/70 (7%)
Query: 1960 KGNMKRHMLSHTGEKPFCCDICGK--SLKGNLKAHILRCQGERPYKCDVCGSSFKDKKHF 2017
K RHM H G +P+ C +CGK +K +L H+ G +PY+C++C F + F
Sbjct: 22 KSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRDSF 81
Query: 2018 SVHIRNH-GE 2026
H
Sbjct: 82 --HRHVTSCT 89
Score = 55.9 bits (136), Expect = 2e-09
Identities = 23/61 (37%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Query: 1969 SHTGEKPFCCDICGK--SLKGNLKAHILRCQGERPYKCDVCGSSFKDKKHFSVHIRNH-G 2025
+G+K + C CGK + K H+ G RPY C VCG FK K H H++ H G
Sbjct: 4 GSSGDKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTG 62
Query: 2026 E 2026
Sbjct: 63 I 63
Score = 54.8 bits (133), Expect = 6e-09
Identities = 26/104 (25%), Positives = 41/104 (39%), Gaps = 10/104 (9%)
Query: 575 CEKIFAAPKQMRMHLRHVHSSIKRYMCDICGKQFTTLSYLDLHRKSHNETVKRKEEDKKY 634
C K F Q H+ +H ++ Y C +CGK+F +L H K H K Y
Sbjct: 15 CGKSFTHKSQRDRHMS-MHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTG-------IKPY 66
Query: 635 ECDSCNKKFWSKRALSEHMIIHTGIKEHQCHVCNTAFYHIRSLS 678
EC+ C K+F + + H + + K ++ S
Sbjct: 67 ECNICAKRFMWRDSFHRH--VTSCTKSYEAAKAEQNTTEASGPS 108
Score = 52.8 bits (128), Expect = 3e-08
Identities = 28/76 (36%), Positives = 40/76 (52%), Gaps = 5/76 (6%)
Query: 1319 VHTSQKRYLCDICGKQFTSTNRVNIHKACVHSSTGNK-FECIYCKKKYRRKFDLKEHINK 1377
+ K Y C CGK FT ++ + H + +H G + + C C KK++ K L H+
Sbjct: 4 GSSGDKLYPCQ-CGKSFTHKSQRDRHMS-MH--LGLRPYGCGVCGKKFKMKHHLVGHMKI 59
Query: 1378 HTGNKPYHCQICKESF 1393
HTG KPY C IC + F
Sbjct: 60 HTGIKPYECNICAKRF 75
Score = 49.7 bits (120), Expect = 3e-07
Identities = 20/62 (32%), Positives = 27/62 (43%), Gaps = 8/62 (12%)
Query: 1532 THTGNKPYQCQICNKSFGTRRNYRLHLKRHKRSAGQLKPEDIHECKICHKIFLENSRLTR 1591
+G+K Y CQ C KSF ++ RH L+P + C +C K F L
Sbjct: 4 GSSGDKLYPCQ-CGKSF----THKSQRDRHMSMHLGLRP---YGCGVCGKKFKMKHHLVG 55
Query: 1592 HM 1593
HM
Sbjct: 56 HM 57
Score = 46.7 bits (112), Expect = 4e-06
Identities = 24/107 (22%), Positives = 38/107 (35%), Gaps = 20/107 (18%)
Query: 374 CTKIFTTAKHMRVHLRSVHNGKERKFICDICGKQFTSNIHASRH-------KNYAHSRDR 426
C K FT H+ +H G R + C +CGK+F H H K Y
Sbjct: 15 CGKSFTHKSQRDRHMS-MHLG-LRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPY------ 66
Query: 427 QKMECDYCKRKFTCKRYLAEHINAHTGNTIYGCRICKKTFLYTNGLR 473
EC+ C ++F + H+ + Y ++ +G
Sbjct: 67 ---ECNICAKRFMWRDSFHRHV--TSCTKSYEAAKAEQNTTEASGPS 108
Score = 43.6 bits (104), Expect = 5e-05
Identities = 29/94 (30%), Positives = 41/94 (43%), Gaps = 18/94 (19%)
Query: 390 SVHNGKERKFICDICGKQFTSNIHASRH-------KNYAHSRDRQKMECDYCKRKFTCKR 442
S +G ++ + C CGK FT RH + Y C C +KF K
Sbjct: 3 SGSSG-DKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPY---------GCGVCGKKFKMKH 51
Query: 443 YLAEHINAHTGNTIYGCRICKKTFLYTNGLRRHI 476
+L H+ HTG Y C IC K F++ + RH+
Sbjct: 52 HLVGHMKIHTGIKPYECNICAKRFMWRDSFHRHV 85
Score = 36.7 bits (86), Expect = 0.012
Identities = 10/32 (31%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Query: 1065 MRKHNGEKPYNCDYCGQTFAARSTFTFHLKKH 1096
+G+K Y C CG++F +S H+ H
Sbjct: 2 SSGSSGDKLYPCQ-CGKSFTHKSQRDRHMSMH 32
Score = 34.0 bits (79), Expect = 0.11
Identities = 26/147 (17%), Positives = 45/147 (30%), Gaps = 47/147 (31%)
Query: 655 IHTGIKEHQCHVCNTAFYHIRSLSRHLKIH--EYNESKMYKCPVCSKMFTELYEMKRHRD 712
+G K + C C +F H RH+ +H + Y C VC K F + + H
Sbjct: 4 GSSGDKLYPCQ-CGKSFTHKSQRDRHMSMHLGL----RPYGCGVCGKKFKMKHHLVGHM- 57
Query: 713 HKHGGKCHVCKICGATIKLFTELEEKEDSSFERKKSKDSFHCDTCGKYFRSRQICNKHIK 772
H G K + C+ C K F + H +
Sbjct: 58 KIHTG-------------------IK------------PYECNICAKRF--MWRDSFH-R 83
Query: 773 RVHLNPT--KTFKCDLCSDRFSTSAKL 797
V + K+++ + ++
Sbjct: 84 HVT---SCTKSYEAAKAEQNTTEASGP 107
Score = 31.6 bits (73), Expect = 0.63
Identities = 18/81 (22%), Positives = 32/81 (39%), Gaps = 16/81 (19%)
Query: 370 QCPLCTKIFTTAKHMRVHLRSVHNGKERKFICDICGKQFT--SNIHASRH---KNYAHSR 424
C +C K F H+ H++ +H G + + C+IC K+F + H K+Y
Sbjct: 39 GCGVCGKKFKMKHHLVGHMK-IHTG-IKPYECNICAKRFMWRDSFHRHVTSCTKSY---- 92
Query: 425 DRQKMECDYCKRKFTCKRYLA 445
E ++ T +
Sbjct: 93 -----EAAKAEQNTTEASGPS 108
Score = 29.7 bits (68), Expect = 3.1
Identities = 20/96 (20%), Positives = 40/96 (41%), Gaps = 9/96 (9%)
Query: 1801 CNKEYATPVTMRKHLREVHVSKKKFKCDLCQKQFKASRSLQCHKQFVHLGVHKPKFLNME 1860
C K + +H+ +H+ + + C +C K+FK L H +H G KP E
Sbjct: 15 CGKSFTHKSQRDRHMS-MHLGLRPYGCGVCGKKFKMKHHLVGH-MKIHTG-IKP----YE 67
Query: 1861 CDYCSRKFPSKNEVTNHIKSHMGVRDILCPICKKGF 1896
C+ C+++F ++ H+ + ++
Sbjct: 68 CNICAKRFMWRDSFHRHV--TSCTKSYEAAKAEQNT 101
Score = 28.2 bits (64), Expect = 8.8
Identities = 14/45 (31%), Positives = 16/45 (35%), Gaps = 5/45 (11%)
Query: 571 QCPICEKIFAAPKQMRMHL-RHVHSSIKRYMCDICGKQFTTLSYL 614
+C IC K F R RHV S K Y + T S
Sbjct: 67 ECNICAKRFM----WRDSFHRHVTSCTKSYEAAKAEQNTTEASGP 107
Score = 28.2 bits (64), Expect = 9.8
Identities = 8/39 (20%), Positives = 13/39 (33%), Gaps = 5/39 (12%)
Query: 1299 CPVCHKTYSTPKTMRRHLRQ-VHTSQKRYLCDICGKQFT 1336
C +C K + R + V + K Y + T
Sbjct: 68 CNICAKRFM----WRDSFHRHVTSCTKSYEAAKAEQNTT 102
>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
g.37.1.1
Length = 95
Score = 92.9 bits (232), Expect = 1e-22
Identities = 33/87 (37%), Positives = 44/87 (50%), Gaps = 5/87 (5%)
Query: 1013 HTGEKPFCCHICGK--SLKGNLKDHILKCHTGERPYKCDVCGSSFKDKWYLGVHMRKHNG 1070
+G C ICGK +L H H+GE+PY C VCG FK K + H+R H+G
Sbjct: 2 SSGSSGVACEICGKIFRDVYHLNRH-KLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDG 60
Query: 1071 E--KPYNCDYCGQTFAARSTFTFHLKK 1095
KPY C CG+ F+ H+K+
Sbjct: 61 SVGKPYICQSCGKGFSRPDHLNGHIKQ 87
Score = 76.0 bits (188), Expect = 1e-16
Identities = 32/92 (34%), Positives = 48/92 (52%), Gaps = 10/92 (10%)
Query: 989 GDKCHICKVCGAKI---KGNLQKHMLSHTGEKPFCCHICGK--SLKGNLKDHILKCHTGE 1043
G C++CG KI +L +H LSH+GEKP+ C +CG K + H+ + H G
Sbjct: 4 GSSGVACEICG-KIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHV-RSHDGS 61
Query: 1044 --RPYKCDVCGSSFKDKWYLGVHMRK-HNGEK 1072
+PY C CG F +L H+++ H+G
Sbjct: 62 VGKPYICQSCGKGFSRPDHLNGHIKQVHSGPS 93
Score = 74.1 bits (183), Expect = 6e-16
Identities = 20/57 (35%), Positives = 33/57 (57%)
Query: 1040 HTGERPYKCDVCGSSFKDKWYLGVHMRKHNGEKPYNCDYCGQTFAARSTFTFHLKKH 1096
+G C++CG F+D ++L H H+GEKPY+C CG F + ++H++ H
Sbjct: 2 SSGSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSH 58
Score = 66.0 bits (162), Expect = 4e-13
Identities = 25/89 (28%), Positives = 35/89 (39%), Gaps = 9/89 (10%)
Query: 1511 FECDFCKKKFYRNFDLQEHINTHTGNKPYQCQICNKSFGTRRNYRLHLKRHKR--SAGQL 1568
C+ C K F + L H +H+G KPY C +C F + + H R
Sbjct: 8 VACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRF----KRKDRMSYHVRSHDGSVG 63
Query: 1569 KPEDIHECKICHKIFLENSRLTRHMNFTH 1597
KP + C+ C K F L H+ H
Sbjct: 64 KP---YICQSCGKGFSRPDHLNGHIKQVH 89
Score = 63.7 bits (156), Expect = 2e-12
Identities = 25/86 (29%), Positives = 37/86 (43%)
Query: 632 KKYECDSCNKKFWSKRALSEHMIIHTGIKEHQCHVCNTAFYHIRSLSRHLKIHEYNESKM 691
C+ C K F L+ H + H+G K + C VC F +S H++ H+ + K
Sbjct: 6 SGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKP 65
Query: 692 YKCPVCSKMFTELYEMKRHRDHKHGG 717
Y C C K F+ + H H G
Sbjct: 66 YICQSCGKGFSRPDHLNGHIKQVHSG 91
Score = 62.1 bits (152), Expect = 8e-12
Identities = 29/95 (30%), Positives = 43/95 (45%), Gaps = 10/95 (10%)
Query: 593 HSSIKRYMCDICGKQFTTLSYLDLHRKSHNETVKRKEEDKKYECDSCNKKFWSKRALSEH 652
S C+ICGK F + +L+ H+ SH+ +K Y C C +F K +S H
Sbjct: 2 SSGSSGVACEICGKIFRDVYHLNRHKLSHS-------GEKPYSCPVCGLRFKRKDRMSYH 54
Query: 653 MIIHTG--IKEHQCHVCNTAFYHIRSLSRHLK-IH 684
+ H G K + C C F L+ H+K +H
Sbjct: 55 VRSHDGSVGKPYICQSCGKGFSRPDHLNGHIKQVH 89
Score = 61.4 bits (150), Expect = 2e-11
Identities = 33/125 (26%), Positives = 44/125 (35%), Gaps = 37/125 (29%)
Query: 924 HTGNKPYQCQICKKSFANKRSYQRDLKRHKQLAGQLKPEDIHECKICHKTFLEKGSLAKH 983
+G+ C+IC K F L RHK KP + C +C F
Sbjct: 2 SSGSSGVACEICGKIF----RDVYHLNRHKLSHSGEKP---YSCPVCGLRF--------- 45
Query: 984 MNWVHGDKCHICKVCGAKIKGNLQKHMLSHTGE--KPFCCHICGK--SLKGNLKDHILKC 1039
K K + H+ SH G KP+ C CGK S +L HI +
Sbjct: 46 -----------------KRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHLNGHIKQV 88
Query: 1040 HTGER 1044
H+G
Sbjct: 89 HSGPS 93
Score = 61.4 bits (150), Expect = 2e-11
Identities = 26/93 (27%), Positives = 43/93 (46%), Gaps = 9/93 (9%)
Query: 1471 AHS-QKKYACDVCGKQFTSTNRVSQHKAHSHFGIIKTIQRKFECDFCKKKFYRNFDLQEH 1529
S AC++CGK F +++HK + + ++ + C C +F R + H
Sbjct: 1 GSSGSSGVACEICGKIFRDVYHLNRHK------LSHSGEKPYSCPVCGLRFKRKDRMSYH 54
Query: 1530 INTHTG--NKPYQCQICNKSFGTRRNYRLHLKR 1560
+ +H G KPY CQ C K F + H+K+
Sbjct: 55 VRSHDGSVGKPYICQSCGKGFSRPDHLNGHIKQ 87
Score = 61.0 bits (149), Expect = 2e-11
Identities = 29/95 (30%), Positives = 44/95 (46%), Gaps = 12/95 (12%)
Query: 862 HSSQKKYVCDMCGKQFTSNNRVSQHKAYSHFGIIKTIERKFECDYCKMKFKSKSFLSEHI 921
S C++CGK F +++HK + + E+ + C C ++FK K +S H+
Sbjct: 2 SSGSSGVACEICGKIFRDVYHLNRHK------LSHSGEKPYSCPVCGLRFKRKDRMSYHV 55
Query: 922 NTHTG--NKPYQCQICKKSFANKRSYQRDLKRHKQ 954
+H G KPY CQ C K F S L H +
Sbjct: 56 RSHDGSVGKPYICQSCGKGF----SRPDHLNGHIK 86
Score = 60.6 bits (148), Expect = 4e-11
Identities = 25/62 (40%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Query: 1970 HTGEKPFCCDICGK--SLKGNLKAHILRCQGERPYKCDVCGSSFKDKKHFSVHIRNH-GE 2026
+G C+ICGK +L H L GE+PY C VCG FK K S H+R+H G
Sbjct: 2 SSGSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGS 61
Query: 2027 DK 2028
Sbjct: 62 VG 63
Score = 60.2 bits (147), Expect = 4e-11
Identities = 30/84 (35%), Positives = 42/84 (50%), Gaps = 8/84 (9%)
Query: 1946 GDKCHVCKVCGAKI---KGNMKRHMLSHTGEKPFCCDICGK--SLKGNLKAHILRCQGE- 1999
G C++CG KI ++ RH LSH+GEKP+ C +CG K + H+ G
Sbjct: 4 GSSGVACEICG-KIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSV 62
Query: 2000 -RPYKCDVCGSSFKDKKHFSVHIR 2022
+PY C CG F H + HI+
Sbjct: 63 GKPYICQSCGKGFSRPDHLNGHIK 86
Score = 58.3 bits (142), Expect = 2e-10
Identities = 24/94 (25%), Positives = 38/94 (40%), Gaps = 9/94 (9%)
Query: 897 TIERKFECDYCKMKFKSKSFLSEHINTHTGNKPYQCQICKKSFANKRSYQRDLKRHKQL- 955
+ C+ C F+ L+ H +H+G KPY C +C F ++ + H +
Sbjct: 3 SGSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRF-KRKDR---MSYHVRSH 58
Query: 956 -AGQLKPEDIHECKICHKTFLEKGSLAKHMNWVH 988
KP + C+ C K F L H+ VH
Sbjct: 59 DGSVGKP---YICQSCGKGFSRPDHLNGHIKQVH 89
Score = 55.6 bits (135), Expect = 2e-09
Identities = 29/91 (31%), Positives = 39/91 (42%), Gaps = 7/91 (7%)
Query: 571 QCPICEKIFAAPKQMRMHLRHVHSSIKRYMCDICGKQFTTLSYLDLHRKSHNETVKRKEE 630
C IC KIF + H HS K Y C +CG +F + H +SH+
Sbjct: 9 ACEICGKIFRDVYHLNRHKL-SHSGEKPYSCPVCGLRFKRKDRMSYHVRSHD-----GSV 62
Query: 631 DKKYECDSCNKKFWSKRALSEHM-IIHTGIK 660
K Y C SC K F L+ H+ +H+G
Sbjct: 63 GKPYICQSCGKGFSRPDHLNGHIKQVHSGPS 93
Score = 55.2 bits (134), Expect = 3e-09
Identities = 28/92 (30%), Positives = 41/92 (44%), Gaps = 10/92 (10%)
Query: 1320 HTSQKRYLCDICGKQFTSTNRVNIHKACVHSSTGNK-FECIYCKKKYRRKFDLKEHINKH 1378
+ C+ICGK F +N HK H +G K + C C +++RK + H+ H
Sbjct: 2 SSGSSGVACEICGKIFRDVYHLNRHKL-SH--SGEKPYSCPVCGLRFKRKDRMSYHVRSH 58
Query: 1379 TG--NKPYHCQICKESFYTLKTYRGDLKRHEQ 1408
G KPY CQ C + F + L H +
Sbjct: 59 DGSVGKPYICQSCGKGF----SRPDHLNGHIK 86
Score = 51.0 bits (123), Expect = 7e-08
Identities = 19/61 (31%), Positives = 27/61 (44%), Gaps = 7/61 (11%)
Query: 1533 HTGNKPYQCQICNKSFGTRRNYRLHLKRHKRSAGQLKPEDIHECKICHKIFLENSRLTRH 1592
+G+ C+IC K F HL RHK S KP + C +C F R++ H
Sbjct: 2 SSGSSGVACEICGKIF----RDVYHLNRHKLSHSGEKP---YSCPVCGLRFKRKDRMSYH 54
Query: 1593 M 1593
+
Sbjct: 55 V 55
Score = 46.7 bits (112), Expect = 2e-06
Identities = 25/86 (29%), Positives = 40/86 (46%), Gaps = 4/86 (4%)
Query: 1299 CPVCHKTYSTPKTMRRHLRQVHTSQKRYLCDICGKQFTSTNRVNIHKACVHSSTGNK-FE 1357
C +C K + + RH H+ +K Y C +CG +F +R++ H H + K +
Sbjct: 10 CEICGKIFRDVYHLNRHKL-SHSGEKPYSCPVCGLRFKRKDRMSYHVR-SHDGSVGKPYI 67
Query: 1358 CIYCKKKYRRKFDLKEHINK-HTGNK 1382
C C K + R L HI + H+G
Sbjct: 68 CQSCGKGFSRPDHLNGHIKQVHSGPS 93
Score = 45.2 bits (108), Expect = 8e-06
Identities = 23/91 (25%), Positives = 35/91 (38%), Gaps = 10/91 (10%)
Query: 841 CPVCHKTYSTPKSMRKHLREVHSSQKKYVCDMCGKQFTSNNRVSQHKAYSHFGIIKTIER 900
C +C K + + +H HS +K Y C +CG +F +R+S H
Sbjct: 10 CEICGKIFRDVYHLNRHKL-SHSGEKPYSCPVCGLRFKRKDRMSYHV------RSHDGSV 62
Query: 901 K--FECDYCKMKFKSKSFLSEHI-NTHTGNK 928
+ C C F L+ HI H+G
Sbjct: 63 GKPYICQSCGKGFSRPDHLNGHIKQVHSGPS 93
Score = 44.4 bits (106), Expect = 2e-05
Identities = 32/122 (26%), Positives = 39/122 (31%), Gaps = 36/122 (29%)
Query: 656 HTGIKEHQCHVCNTAFYHIRSLSRHLKIH--EYNESKMYKCPVCSKMFTELYEMKRHRDH 713
+G C +C F + L+RH H E K Y CPVC F M H
Sbjct: 2 SSGSSGVACEICGKIFRDVYHLNRHKLSHSGE----KPYSCPVCGLRFKRKDRMSYHV-R 56
Query: 714 KHGGKCHVCKICGATIKLFTELEEKEDSSFERKKSKDSFHCDTCGKYFRSRQICNKHIKR 773
H G K + C +CGK F N HIK+
Sbjct: 57 SHDG--------------------------SVGK---PYICQSCGKGFSRPDHLNGHIKQ 87
Query: 774 VH 775
VH
Sbjct: 88 VH 89
Score = 42.5 bits (101), Expect = 9e-05
Identities = 27/94 (28%), Positives = 38/94 (40%), Gaps = 19/94 (20%)
Query: 392 HNGKERKFICDICGKQFTSNIHASRH-------KNYAHSRDRQKMECDYCKRKFTCKRYL 444
+G C+ICGK F H +RH K Y C C +F K +
Sbjct: 2 SSG-SSGVACEICGKIFRDVYHLNRHKLSHSGEKPY---------SCPVCGLRFKRKDRM 51
Query: 445 AEHINAHTGNTI--YGCRICKKTFLYTNGLRRHI 476
+ H+ +H G+ Y C+ C K F + L HI
Sbjct: 52 SYHVRSHDGSVGKPYICQSCGKGFSRPDHLNGHI 85
Score = 37.1 bits (87), Expect = 0.006
Identities = 28/117 (23%), Positives = 42/117 (35%), Gaps = 33/117 (28%)
Query: 752 FHCDTCGKYFRSRQICNKHIKRVHLNPT--KTFKCDLCSDRFSTSAKLKKHVDKIHFTPE 809
C+ CGK FR N+H K H + K + C +C RF ++ HV + H
Sbjct: 8 VACEICGKIFRDVYHLNRH-KLSH---SGEKPYSCPVCGLRFKRKDRMSYHV-RSH-DGS 61
Query: 810 FQEPSKKNEPLDTGDYTLEQWNELVTAQSKDCPVCHKTYSTPKSMRKHLREVHSSQK 866
+P C C K +S P + H+++VHS
Sbjct: 62 VGKPYI-------------------------CQSCGKGFSRPDHLNGHIKQVHSGPS 93
Score = 34.8 bits (81), Expect = 0.037
Identities = 20/55 (36%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Query: 370 QCPLCTKIFTTAKHMRVHLRSVHNGKERK-FICDICGKQFTSNIHASRHKNYAHS 423
CP+C F M H+R H+G K +IC CGK F+ H + H HS
Sbjct: 37 SCPVCGLRFKRKDRMSYHVR-SHDGSVGKPYICQSCGKGFSRPDHLNGHIKQVHS 90
Score = 33.2 bits (77), Expect = 0.15
Identities = 27/92 (29%), Positives = 41/92 (44%), Gaps = 8/92 (8%)
Query: 1819 HVSKKKFKCDLCQKQFKASRSLQCHKQFVHLGVHKPKFLNMECDYCSRKFPSKNEVTNHI 1878
C++C K F+ L HK H G KP C C +F K+ ++ H+
Sbjct: 2 SSGSSGVACEICGKIFRDVYHLNRHKL-SHSG-EKP----YSCPVCGLRFKRKDRMSYHV 55
Query: 1879 KSHMG--VRDILCPICKKGFIALKHMKTHLKK 1908
+SH G + +C C KGF H+ H+K+
Sbjct: 56 RSHDGSVGKPYICQSCGKGFSRPDHLNGHIKQ 87
Score = 32.8 bits (76), Expect = 0.20
Identities = 20/60 (33%), Positives = 24/60 (40%), Gaps = 3/60 (5%)
Query: 1793 EKTKLCPVCNKEYATPVTMRKHLREVHV--SKKKFKCDLCQKQFKASRSLQCHKQFVHLG 1850
EK CPVC + M H+R H K + C C K F L H + VH G
Sbjct: 33 EKPYSCPVCGLRFKRKDRMSYHVR-SHDGSVGKPYICQSCGKGFSRPDHLNGHIKQVHSG 91
Score = 32.5 bits (75), Expect = 0.28
Identities = 20/108 (18%), Positives = 32/108 (29%), Gaps = 37/108 (34%)
Query: 430 ECDYCKRKFTCKRYLAEHINAHTGNTIYGCRICKKTFLYTNGLRRHILSRHKDTDVVILN 489
C+ C + F +L H +H+G Y C +C F R
Sbjct: 9 ACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRF-----------KRK--------- 48
Query: 490 EVKDIFPSHLQSYQI----------KCRYCARTFSTQNDLKEHVSSVH 527
+ + C+ C + FS + L H+ VH
Sbjct: 49 -------DRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHLNGHIKQVH 89
Score = 32.1 bits (74), Expect = 0.34
Identities = 26/118 (22%), Positives = 39/118 (33%), Gaps = 36/118 (30%)
Query: 780 KTFKCDLCSDRFSTSAKLKKHVDKIHFTPEFQEPSKKNEPLDTGD--YTLEQWNELVTAQ 837
C++C F L +H H +G+ Y+
Sbjct: 6 SGVACEICGKIFRDVYHLNRHK-LSH----------------SGEKPYS----------- 37
Query: 838 SKDCPVCHKTYSTPKSMRKHLREVHS--SQKKYVCDMCGKQFTSNNRVSQHKAYSHFG 893
CPVC + M H+R H K Y+C CGK F+ + ++ H H G
Sbjct: 38 ---CPVCGLRFKRKDRMSYHVR-SHDGSVGKPYICQSCGKGFSRPDHLNGHIKQVHSG 91
Score = 31.7 bits (73), Expect = 0.49
Identities = 25/92 (27%), Positives = 36/92 (39%), Gaps = 14/92 (15%)
Query: 1889 CPICKKGFIALKHMKTHLKKHMWKAGEIPLEDTYLCDLCSKVFLEHKDMIRHREWVH--- 1945
C IC K F + H+ H H +GE P Y C +C F M H H
Sbjct: 10 CEICGKIFRDVYHLNRHKLSH---SGEKP----YSCPVCGLRFKRKDRMSYHVR-SHDGS 61
Query: 1946 GDKCHVCKVCGA--KIKGNMKRHM-LSHTGEK 1974
K ++C+ CG ++ H+ H+G
Sbjct: 62 VGKPYICQSCGKGFSRPDHLNGHIKQVHSGPS 93
Score = 30.2 bits (69), Expect = 1.5
Identities = 23/86 (26%), Positives = 34/86 (39%), Gaps = 5/86 (5%)
Query: 1860 ECDYCSRKFPSKNEVTNHIKSHMGVRDILCPICKKGFIALKHMKTHLKKHMWKAGEIPLE 1919
C+ C + F + H SH G + CP+C F M H++ H G +
Sbjct: 9 ACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSH---DGSVG-- 63
Query: 1920 DTYLCDLCSKVFLEHKDMIRHREWVH 1945
Y+C C K F + H + VH
Sbjct: 64 KPYICQSCGKGFSRPDHLNGHIKQVH 89
Score = 28.6 bits (65), Expect = 6.2
Identities = 26/83 (31%), Positives = 36/83 (43%), Gaps = 7/83 (8%)
Query: 104 TCRICTEVFENLTLLRRHMRVKHPGEQNLPCRLCDMSFSNKYQKKKHYSAFHKGMPFIPS 163
C IC ++F ++ L RH H GE+ C +C + F K + H H G P
Sbjct: 9 ACEICGKIFRDVYHLNRHKLS-HSGEKPYSCPVCGLRFKRKDRMSYHVR-SHDGSVGKP- 65
Query: 164 FTCPICQKIFKNKEWYLDHLSLH 186
+ C C K F DHL+ H
Sbjct: 66 YICQSCGKGFSRP----DHLNGH 84
>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger,
structural genomics, NPPSFA; NMR {Homo sapiens} SCOP:
g.37.1.1 g.37.1.1
Length = 77
Score = 89.9 bits (224), Expect = 9e-22
Identities = 25/76 (32%), Positives = 36/76 (47%), Gaps = 6/76 (7%)
Query: 1004 GNLQKHMLSHTGEKPFCCHICGK--SLKGNLKDHILKCHTGE--RPYKCDVCGSSFKDKW 1059
G+ +H+GEKP+ C+IC + G +K HI E + C C + K
Sbjct: 1 GSSGSSGRTHSGEKPYECYICHARFTQSGTMKMHI-LQKHTENVAKFHCPHCDTVIARKS 59
Query: 1060 YLGVHMRK-HNGEKPY 1074
LGVH+RK H+ P
Sbjct: 60 DLGVHLRKQHSYSGPS 75
Score = 76.0 bits (188), Expect = 8e-17
Identities = 18/69 (26%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Query: 1030 GNLKDHILKCHTGERPYKCDVCGSSFKDKWYLGVHMRKHNGE--KPYNCDYCGQTFAARS 1087
G+ + H+GE+PY+C +C + F + +H+ + + E ++C +C A +S
Sbjct: 1 GSSGSS-GRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKS 59
Query: 1088 TFTFHLKKH 1096
HL+K
Sbjct: 60 DLGVHLRKQ 68
Score = 74.1 bits (183), Expect = 3e-16
Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 4/68 (5%)
Query: 1961 GNMKRHMLSHTGEKPFCCDICGK--SLKGNLKAHILRCQGE--RPYKCDVCGSSFKDKKH 2016
G+ +H+GEKP+ C IC + G +K HIL+ E + C C + K
Sbjct: 1 GSSGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSD 60
Query: 2017 FSVHIRNH 2024
VH+R
Sbjct: 61 LGVHLRKQ 68
Score = 62.9 bits (154), Expect = 3e-12
Identities = 19/78 (24%), Positives = 27/78 (34%), Gaps = 10/78 (12%)
Query: 1526 LQEHINTHTGNKPYQCQICNKSFGTRRNYRLHLKRHKR--SAGQLKPEDIHECKICHKIF 1583
TH+G KPY+C IC+ F T+ +K H + C C +
Sbjct: 3 SGSSGRTHSGEKPYECYICHARF-TQSG---TMKMHILQKHTENVAK---FHCPHCDTVI 55
Query: 1584 LENSRLTRHMNFTH-GDK 1600
S L H+ H
Sbjct: 56 ARKSDLGVHLRKQHSYSG 73
Score = 59.8 bits (146), Expect = 4e-11
Identities = 23/134 (17%), Positives = 33/134 (24%), Gaps = 65/134 (48%)
Query: 917 LSEHINTHTGNKPYQCQICKKSFANKRSYQRDLKRHKQLAGQLKPEDIHECKICHKTFLE 976
TH+G KPY+C IC F +
Sbjct: 3 SGSSGRTHSGEKPYECYICHARFT-----------------------------------Q 27
Query: 977 KGSLAKHMNWVHGDKCHICKVCGAKIKGNLQKHMLSHTGE--KPFCCHICGKSL--KGNL 1032
G++ H+ L E F C C + K +L
Sbjct: 28 SGTMKMHI--------------------------LQKHTENVAKFHCPHCDTVIARKSDL 61
Query: 1033 KDHILKCHTGERPY 1046
H+ K H+ P
Sbjct: 62 GVHLRKQHSYSGPS 75
Score = 57.9 bits (141), Expect = 2e-10
Identities = 12/69 (17%), Positives = 26/69 (37%)
Query: 649 LSEHMIIHTGIKEHQCHVCNTAFYHIRSLSRHLKIHEYNESKMYKCPVCSKMFTELYEMK 708
H+G K ++C++C+ F ++ H+ + CP C + ++
Sbjct: 3 SGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLG 62
Query: 709 RHRDHKHGG 717
H +H
Sbjct: 63 VHLRKQHSY 71
Score = 57.9 bits (141), Expect = 2e-10
Identities = 20/76 (26%), Positives = 33/76 (43%), Gaps = 4/76 (5%)
Query: 1311 TMRRHLRQVHTSQKRYLCDICGKQFTSTNRVNIHKACVHSSTGNK-FECIYCKKKYRRKF 1369
+ R H+ +K Y C IC +FT + + +H + F C +C RK
Sbjct: 2 SSGSSGR-THSGEKPYECYICHARFTQSGTMKMHIL-QKHTENVAKFHCPHCDTVIARKS 59
Query: 1370 DLKEHI-NKHTGNKPY 1384
DL H+ +H+ + P
Sbjct: 60 DLGVHLRKQHSYSGPS 75
Score = 56.0 bits (136), Expect = 8e-10
Identities = 19/76 (25%), Positives = 27/76 (35%), Gaps = 7/76 (9%)
Query: 586 RMHLRHVHSSIKRYMCDICGKQFTTLSYLDLHRKSHNETVKRKEEDKKYECDSCNKKFWS 645
R HS K Y C IC +FT + +H + E K+ C C+
Sbjct: 4 GSSGR-THSGEKPYECYICHARFTQSGTMKMHILQKHT-----ENVAKFHCPHCDTVIAR 57
Query: 646 KRALSEHM-IIHTGIK 660
K L H+ H+
Sbjct: 58 KSDLGVHLRKQHSYSG 73
Score = 54.8 bits (133), Expect = 2e-09
Identities = 10/53 (18%), Positives = 23/53 (43%), Gaps = 2/53 (3%)
Query: 1511 FECDFCKKKFYRNFDLQEHINTHTG--NKPYQCQICNKSFGTRRNYRLHLKRH 1561
+EC C +F ++ ++ HI + C C+ + + +HL++
Sbjct: 16 YECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQ 68
Score = 53.7 bits (130), Expect = 5e-09
Identities = 18/64 (28%), Positives = 27/64 (42%), Gaps = 7/64 (10%)
Query: 1946 GDKCHVCKVCGAK--IKGNMKRHMLSHTGE--KPFCCDICGKSL--KGNLKAHILRCQ-G 1998
G+K + C +C A+ G MK H+L E F C C + K +L H+ +
Sbjct: 12 GEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSY 71
Query: 1999 ERPY 2002
P
Sbjct: 72 SGPS 75
Score = 53.3 bits (129), Expect = 8e-09
Identities = 21/79 (26%), Positives = 29/79 (36%), Gaps = 13/79 (16%)
Query: 1464 MRIHLREAHSQKKYACDVCGKQFTSTNRVSQHKAHSHFGIIKT--IQRKFECDFCKKKFY 1521
R H E K Y C +C +FT + + H + K KF C C
Sbjct: 7 GRTHSGE----KPYECYICHARFTQSGTMKMHI------LQKHTENVAKFHCPHCDTVIA 56
Query: 1522 RNFDLQEHI-NTHTGNKPY 1539
R DL H+ H+ + P
Sbjct: 57 RKSDLGVHLRKQHSYSGPS 75
Score = 51.4 bits (124), Expect = 3e-08
Identities = 14/56 (25%), Positives = 19/56 (33%), Gaps = 6/56 (10%)
Query: 899 ERKFECDYCKMKFKSKSFLSEHINTHTG--NKPYQCQICKKSFANKRSYQRDLKRH 952
E+ +EC C +F + HI + C C A K DL H
Sbjct: 13 EKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARK----SDLGVH 64
Score = 51.4 bits (124), Expect = 4e-08
Identities = 23/81 (28%), Positives = 33/81 (40%), Gaps = 10/81 (12%)
Query: 853 SMRKHLREVHSSQKKYVCDMCGKQFTSNNRVSQHKAYSHFGIIKTIE--RKFECDYCKMK 910
S R HS +K Y C +C +FT + + H + K E KF C +C
Sbjct: 2 SSGSSGR-THSGEKPYECYICHARFTQSGTMKMHI------LQKHTENVAKFHCPHCDTV 54
Query: 911 FKSKSFLSEHI-NTHTGNKPY 930
KS L H+ H+ + P
Sbjct: 55 IARKSDLGVHLRKQHSYSGPS 75
Score = 47.1 bits (113), Expect = 1e-06
Identities = 15/56 (26%), Positives = 23/56 (41%), Gaps = 3/56 (5%)
Query: 632 KKYECDSCNKKFWSKRALSEHMIIHTG--IKEHQCHVCNTAFYHIRSLSRHL-KIH 684
K YEC C+ +F + H++ + + C C+T L HL K H
Sbjct: 14 KPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQH 69
Score = 45.6 bits (109), Expect = 4e-06
Identities = 15/53 (28%), Positives = 23/53 (43%), Gaps = 2/53 (3%)
Query: 571 QCPICEKIFAAPKQMRMHLR-HVHSSIKRYMCDICGKQFTTLSYLDLH-RKSH 621
+C IC F M+MH+ ++ ++ C C S L +H RK H
Sbjct: 17 ECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQH 69
Score = 43.7 bits (104), Expect = 2e-05
Identities = 18/72 (25%), Positives = 28/72 (38%), Gaps = 3/72 (4%)
Query: 383 HMRVHLRSVHNGKERKFICDICGKQFTSNIHASRHKNYAHSRDRQKMECDYCKRKFTCKR 442
R H+G E+ + C IC +FT + H H+ + K C +C K
Sbjct: 2 SSGSSGR-THSG-EKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKS 59
Query: 443 YLAEHI-NAHTG 453
L H+ H+
Sbjct: 60 DLGVHLRKQHSY 71
Score = 42.5 bits (101), Expect = 5e-05
Identities = 12/58 (20%), Positives = 20/58 (34%), Gaps = 2/58 (3%)
Query: 370 QCPLCTKIFTTAKHMRVHLRSVHNGKERK-FICDICGKQFTSNIHASRHKNYAHSRDR 426
+C +C FT + M++H+ + + F C C H HS
Sbjct: 17 ECYICHARFTQSGTMKMHIL-QKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYSG 73
Score = 41.7 bits (99), Expect = 8e-05
Identities = 22/106 (20%), Positives = 29/106 (27%), Gaps = 35/106 (33%)
Query: 1371 LKEHINKHTGNKPYHCQICKESFYTLKTYRGDLKRHEQLAEQSDEMHSTSKFQNKIKKPL 1430
H+G KPY C IC F T G +K H T +
Sbjct: 3 SGSSGRTHSGEKPYECYICHARF----TQSGTMKMHIL-------QKHT-----ENVAKF 46
Query: 1431 DTGDLSWEEWNELVLSGTKKCPVCHKTYSTPRQMRIHLREAHSQKK 1476
CP C + + +HLR+ HS
Sbjct: 47 -------------------HCPHCDTVIARKSDLGVHLRKQHSYSG 73
Score = 41.7 bits (99), Expect = 1e-04
Identities = 13/54 (24%), Positives = 18/54 (33%)
Query: 752 FHCDTCGKYFRSRQICNKHIKRVHLNPTKTFKCDLCSDRFSTSAKLKKHVDKIH 805
+ C C F HI + H F C C + + L H+ K H
Sbjct: 16 YECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQH 69
Score = 39.8 bits (94), Expect = 5e-04
Identities = 14/72 (19%), Positives = 30/72 (41%), Gaps = 5/72 (6%)
Query: 1810 TMRKHLREVHVSKKKFKCDLCQKQFKASRSLQCHKQFVHLGVHKPKFLNMECDYCSRKFP 1869
+ R H +K ++C +C +F S +++ H + KF C +C
Sbjct: 2 SSGSSGR-THSGEKPYECYICHARFTQSGTMKMHIL-QKHTENVAKF---HCPHCDTVIA 56
Query: 1870 SKNEVTNHIKSH 1881
K+++ H++
Sbjct: 57 RKSDLGVHLRKQ 68
Score = 39.4 bits (93), Expect = 5e-04
Identities = 18/59 (30%), Positives = 26/59 (44%), Gaps = 3/59 (5%)
Query: 284 KMFKCDICVASFLTPHKLKTHIKTKHRTQLKELYTFECQHCEDKFSTPFELNKHNESKH 342
K ++C IC A F +K HI KH + F C HC+ + +L H +H
Sbjct: 14 KPYECYICHARFTQSGTMKMHILQKHTENVA---KFHCPHCDTVIARKSDLGVHLRKQH 69
Score = 39.4 bits (93), Expect = 6e-04
Identities = 12/55 (21%), Positives = 19/55 (34%), Gaps = 3/55 (5%)
Query: 1798 CPVCNKEYATPVTMRKHLREVHV--SKKKFKCDLCQKQFKASRSLQCHKQFVHLG 1850
C +C+ + TM+ H+ + KF C C L H + H
Sbjct: 18 CYICHARFTQSGTMKMHIL-QKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSY 71
Score = 39.0 bits (92), Expect = 8e-04
Identities = 12/53 (22%), Positives = 19/53 (35%), Gaps = 2/53 (3%)
Query: 430 ECDYCKRKFTCKRYLAEHINAHTGNTI--YGCRICKKTFLYTNGLRRHILSRH 480
EC C +FT + HI + + C C + L H+ +H
Sbjct: 17 ECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQH 69
Score = 38.3 bits (90), Expect = 0.002
Identities = 17/89 (19%), Positives = 26/89 (29%), Gaps = 27/89 (30%)
Query: 780 KTFKCDLCSDRFSTSAKLKKHVDKIHFTPEFQEPSKKNEPLDTGDYTLEQWNELVTAQSK 839
K ++C +C RF+ S +K H+ E
Sbjct: 14 KPYECYICHARFTQSGTMKMHI-LQK-HTENVAKFH------------------------ 47
Query: 840 DCPVCHKTYSTPKSMRKHLREVHSSQKKY 868
CP C + + HLR+ HS
Sbjct: 48 -CPHCDTVIARKSDLGVHLRKQHSYSGPS 75
Score = 36.7 bits (86), Expect = 0.006
Identities = 17/102 (16%), Positives = 27/102 (26%), Gaps = 32/102 (31%)
Query: 1877 HIKSHMGVRDILCPICKKGFIALKHMKTHLKKHMWKAGEIPLEDTYLCDLCSKVFLEHKD 1936
++H G + C IC F MK H+ + E + C C V
Sbjct: 6 SGRTHSGEKPYECYICHARFTQSGTMKMHILQK---HTEN--VAKFHCPHCDTVIAR--- 57
Query: 1937 MIRHREWVHGDKCHVCKVCGAKIKGNMKRHM-LSHTGEKPFC 1977
K ++ H+ H+ P
Sbjct: 58 -----------------------KSDLGVHLRKQHSYSGPSS 76
Score = 35.2 bits (82), Expect = 0.020
Identities = 19/84 (22%), Positives = 29/84 (34%), Gaps = 17/84 (20%)
Query: 444 LAEHINAHTGNTIYGCRICKKTFLYTNGLRRHILSRHKDTDVVILNEVKDIFPSHLQSYQ 503
H+G Y C IC F + ++ HIL +H E F
Sbjct: 3 SGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKH--------TENVAKF-------- 46
Query: 504 IKCRYCARTFSTQNDLKEHVSSVH 527
C +C + ++DL H+ H
Sbjct: 47 -HCPHCDTVIARKSDLGVHLRKQH 69
Score = 34.4 bits (80), Expect = 0.034
Identities = 11/55 (20%), Positives = 16/55 (29%), Gaps = 2/55 (3%)
Query: 256 FTCDTCDKPFDTIEKCRRHAIRMHMN-PCKMFKCDICVASFLTPHKLKTHIKTKH 309
+ C C F + H I F C C L H++ +H
Sbjct: 16 YECYICHARFTQSGTMKMH-ILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQH 69
Score = 34.4 bits (80), Expect = 0.038
Identities = 12/56 (21%), Positives = 16/56 (28%), Gaps = 3/56 (5%)
Query: 104 TCRICTEVFENLTLLRRHMRVKHPGEQNLP--CRLCDMSFSNKYQKKKHYSAFHKG 157
C IC F ++ H+ E C CD + K H H
Sbjct: 17 ECYICHARFTQSGTMKMHILQ-KHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSY 71
Score = 34.0 bits (79), Expect = 0.043
Identities = 16/69 (23%), Positives = 21/69 (30%), Gaps = 7/69 (10%)
Query: 118 LRRHMRVKHPGEQNLPCRLCDMSFSNKYQKKKHYSAFHKGMPFIPSFTCPICQKIFKNKE 177
R H GE+ C +C F+ K H F CP C + K
Sbjct: 3 SGSSGRT-HSGEKPYECYICHARFTQSGTMKMHILQ-KHTENVAK-FHCPHCDTVIARK- 58
Query: 178 WYLDHLSLH 186
L +H
Sbjct: 59 ---SDLGVH 64
Score = 30.6 bits (70), Expect = 0.81
Identities = 7/28 (25%), Positives = 11/28 (39%)
Query: 1299 CPVCHKTYSTPKTMRRHLRQVHTSQKRY 1326
CP C + + HLR+ H+
Sbjct: 48 CPHCDTVIARKSDLGVHLRKQHSYSGPS 75
Score = 30.2 bits (69), Expect = 0.93
Identities = 9/43 (20%), Positives = 13/43 (30%), Gaps = 15/43 (34%)
Query: 1557 HLKRHKRSAGQLKPEDIH------ECKICHKIFLENSRLTRHM 1593
R H EC ICH F ++ + H+
Sbjct: 2 SSGSSGR---------THSGEKPYECYICHARFTQSGTMKMHI 35
>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
g.37.1.1 g.37.1.1
Length = 79
Score = 89.1 bits (222), Expect = 2e-21
Identities = 21/77 (27%), Positives = 34/77 (44%), Gaps = 6/77 (7%)
Query: 1013 HTGEKPFCCHI--CGK--SLKGNLKDHILKCHTGERPYKCD--VCGSSFKDKWYLGVHMR 1066
+G C CG+ S + L H H ++ + C CG SF K +L HM+
Sbjct: 2 SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMK 61
Query: 1067 KHNGEKPYNCDYCGQTF 1083
H+ + Y C++ G +
Sbjct: 62 LHSDTRDYICEFSGPSS 78
Score = 64.9 bits (159), Expect = 7e-13
Identities = 22/79 (27%), Positives = 34/79 (43%), Gaps = 9/79 (11%)
Query: 1475 KKYACDV--CGKQFTSTNRVSQHKAHSHFGIIKTIQRKFECDF--CKKKFYRNFDLQEHI 1530
CD CG+ F++ ++ HK + H Q+ F C C K F L+EH+
Sbjct: 6 SGMPCDFPGCGRIFSNRQYLNHHKKYQHIH-----QKSFSCPEPACGKSFNFKKHLKEHM 60
Query: 1531 NTHTGNKPYQCQICNKSFG 1549
H+ + Y C+ S G
Sbjct: 61 KLHSDTRDYICEFSGPSSG 79
Score = 64.1 bits (157), Expect = 1e-12
Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 5/62 (8%)
Query: 1040 HTGERPYKCDV--CGSSFKDKWYLGVHMR-KHNGEKPYNCDY--CGQTFAARSTFTFHLK 1094
+G CD CG F ++ YL H + +H +K ++C CG++F + H+K
Sbjct: 2 SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMK 61
Query: 1095 KH 1096
H
Sbjct: 62 LH 63
Score = 64.1 bits (157), Expect = 1e-12
Identities = 22/82 (26%), Positives = 33/82 (40%), Gaps = 9/82 (10%)
Query: 862 HSSQKKYVCDM--CGKQFTSNNRVSQHKAYSHFGIIKTIERKFECDY--CKMKFKSKSFL 917
S CD CG+ F++ ++ HK Y H ++ F C C F K L
Sbjct: 2 SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIH-----QKSFSCPEPACGKSFNFKKHL 56
Query: 918 SEHINTHTGNKPYQCQICKKSF 939
EH+ H+ + Y C+ S
Sbjct: 57 KEHMKLHSDTRDYICEFSGPSS 78
Score = 59.1 bits (144), Expect = 6e-11
Identities = 23/79 (29%), Positives = 33/79 (41%), Gaps = 7/79 (8%)
Query: 1320 HTSQKRYLCDI--CGKQFTSTNRVNIHKACVHSSTGNK-FEC--IYCKKKYRRKFDLKEH 1374
+ CD CG+ F++ +N HK H K F C C K + K LKEH
Sbjct: 2 SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQH--IHQKSFSCPEPACGKSFNFKKHLKEH 59
Query: 1375 INKHTGNKPYHCQICKESF 1393
+ H+ + Y C+ S
Sbjct: 60 MKLHSDTRDYICEFSGPSS 78
Score = 57.2 bits (139), Expect = 4e-10
Identities = 18/57 (31%), Positives = 24/57 (42%), Gaps = 5/57 (8%)
Query: 1960 KGNMKRHM-LSHTGEKPFCCD--ICGKS--LKGNLKAHILRCQGERPYKCDVCGSSF 2011
+ + H H +K F C CGKS K +LK H+ R Y C+ G S
Sbjct: 22 RQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFSGPSS 78
Score = 55.6 bits (135), Expect = 1e-09
Identities = 19/109 (17%), Positives = 31/109 (28%), Gaps = 38/109 (34%)
Query: 924 HTGNKPYQCQICKKSFANKRSYQRDLKRHKQLAGQLKPEDIHECKICHKTFLEKGSLAKH 983
+G+ C + C + F + L H
Sbjct: 2 SSGSSGMPC---------------------------------DFPGCGRIFSNRQYLNHH 28
Query: 984 MNWVH-GDKCHICK--VCGA--KIKGNLQKHMLSHTGEKPFCCHICGKS 1027
+ H K C CG K +L++HM H+ + + C G S
Sbjct: 29 KKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFSGPS 77
Score = 54.9 bits (133), Expect = 2e-09
Identities = 19/67 (28%), Positives = 30/67 (44%), Gaps = 9/67 (13%)
Query: 1970 HTGEKPFCCDI--CGK--SLKGNLKAHILRCQ--GERPYKCD--VCGSSFKDKKHFSVHI 2021
+G CD CG+ S + L H + Q ++ + C CG SF KKH H+
Sbjct: 2 SSGSSGMPCDFPGCGRIFSNRQYLNHHK-KYQHIHQKSFSCPEPACGKSFNFKKHLKEHM 60
Query: 2022 RNHGEDK 2028
+ H + +
Sbjct: 61 KLHSDTR 67
Score = 51.0 bits (123), Expect = 5e-08
Identities = 22/84 (26%), Positives = 35/84 (41%), Gaps = 12/84 (14%)
Query: 593 HSSIKRYMCDI--CGKQFTTLSYLDLH-RKSHNETVKRKEEDKKYECD--SCNKKFWSKR 647
S CD CG+ F+ YL+ H + H K + C +C K F K+
Sbjct: 2 SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIH-------QKSFSCPEPACGKSFNFKK 54
Query: 648 ALSEHMIIHTGIKEHQCHVCNTAF 671
L EHM +H+ +++ C +
Sbjct: 55 HLKEHMKLHSDTRDYICEFSGPSS 78
Score = 49.5 bits (119), Expect = 1e-07
Identities = 18/70 (25%), Positives = 31/70 (44%), Gaps = 7/70 (10%)
Query: 1922 YLCDL--CSKVFLEHKDMIRHREWVH-GDKCHVCK--VCGA--KIKGNMKRHMLSHTGEK 1974
CD C ++F + + H+++ H K C CG K ++K HM H+ +
Sbjct: 8 MPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTR 67
Query: 1975 PFCCDICGKS 1984
+ C+ G S
Sbjct: 68 DYICEFSGPS 77
Score = 46.8 bits (112), Expect = 1e-06
Identities = 17/77 (22%), Positives = 27/77 (35%), Gaps = 11/77 (14%)
Query: 632 KKYECDS--CNKKFWSKRALSEHM-IIHTGIKEHQC--HVCNTAFYHIRSLSRHLKIH-- 684
CD C + F +++ L+ H H K C C +F + L H+K+H
Sbjct: 6 SGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSD 65
Query: 685 EYNESKMYKCPVCSKMF 701
+ Y C
Sbjct: 66 T----RDYICEFSGPSS 78
Score = 44.5 bits (106), Expect = 9e-06
Identities = 20/79 (25%), Positives = 33/79 (41%), Gaps = 6/79 (7%)
Query: 392 HNGKERKFICDI--CGKQFTSNIHASRHKNYAHSRDRQKMECDY--CKRKFTCKRYLAEH 447
+G CD CG+ F++ + + HK Y H + C C + F K++L EH
Sbjct: 2 SSG-SSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQK-SFSCPEPACGKSFNFKKHLKEH 59
Query: 448 INAHTGNTIYGCRICKKTF 466
+ H+ Y C +
Sbjct: 60 MKLHSDTRDYICEFSGPSS 78
Score = 42.9 bits (102), Expect = 3e-05
Identities = 18/75 (24%), Positives = 25/75 (33%), Gaps = 16/75 (21%)
Query: 1533 HTGNKPYQCQI--CNKSFGTRRNYRLHLKRHKRSA--GQLKPEDIHECK--ICHKIFLEN 1586
+G+ C C + F + R +L HK+ Q K C C K F
Sbjct: 2 SSGSSGMPCDFPGCGRIF----SNRQYLNHHKKYQHIHQ-KS---FSCPEPACGKSFNFK 53
Query: 1587 SRLTRHMNFTH-GDK 1600
L HM H +
Sbjct: 54 KHLKEHMK-LHSDTR 67
Score = 42.5 bits (101), Expect = 5e-05
Identities = 18/74 (24%), Positives = 30/74 (40%), Gaps = 9/74 (12%)
Query: 572 CPICEKIFAAPKQMRMHLRHVHSSIKRYMCD--ICGKQFTTLSYLDLHRKSHNETVKRKE 629
P C +IF+ + + H ++ H K + C CGK F +L H K H+
Sbjct: 12 FPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHS------- 64
Query: 630 EDKKYECDSCNKKF 643
+ + Y C+
Sbjct: 65 DTRDYICEFSGPSS 78
Score = 37.5 bits (88), Expect = 0.003
Identities = 19/82 (23%), Positives = 28/82 (34%), Gaps = 9/82 (10%)
Query: 1819 HVSKKKFKCDL--CQKQFKASRSLQCHKQFVHLGVHKPKFLNMECDY--CSRKFPSKNEV 1874
CD C + F + L HK++ H+ K C C + F K +
Sbjct: 2 SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIH-QKS----FSCPEPACGKSFNFKKHL 56
Query: 1875 TNHIKSHMGVRDILCPICKKGF 1896
H+K H RD +C
Sbjct: 57 KEHMKLHSDTRDYICEFSGPSS 78
Score = 34.8 bits (81), Expect = 0.026
Identities = 9/36 (25%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Query: 1300 PVCHKTYSTPKTMRRHLRQVHTSQKRYLCDICGKQF 1335
P C K+++ K ++ H++ +H+ + Y+C+ G
Sbjct: 44 PACGKSFNFKKHLKEHMK-LHSDTRDYICEFSGPSS 78
Score = 33.3 bits (77), Expect = 0.083
Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 10/60 (16%)
Query: 752 FHCDT--CGKYFRSRQICNKHIKRVHLNPT--KTFKCD--LCSDRFSTSAKLKKHVDKIH 805
CD CG+ F +RQ N H K H K+F C C F+ LK+H+ K+H
Sbjct: 8 MPCDFPGCGRIFSNRQYLNHHKKYQH---IHQKSFSCPEPACGKSFNFKKHLKEHM-KLH 63
Score = 32.5 bits (75), Expect = 0.16
Identities = 22/94 (23%), Positives = 33/94 (35%), Gaps = 25/94 (26%)
Query: 317 YTFECQHCEDKFSTPFELNKHNESKHEKGRKLNPETGGYTYEEYKEVVVSKSKQCP--LC 374
+ C FS LN H + +H KS CP C
Sbjct: 8 MPCDFPGCGRIFSNRQYLNHHKKYQH---------IH------------QKSFSCPEPAC 46
Query: 375 TKIFTTAKHMRVHLRSVHNGKERKFICDICGKQF 408
K F KH++ H++ +H+ R +IC+ G
Sbjct: 47 GKSFNFKKHLKEHMK-LHSD-TRDYICEFSGPSS 78
Score = 32.1 bits (74), Expect = 0.22
Identities = 14/80 (17%), Positives = 27/80 (33%), Gaps = 10/80 (12%)
Query: 1793 EKTKLCPV--CNKEYATPVTMRKHLREVHVSKKKFKCD--LCQKQFKASRSLQCHKQFVH 1848
C C + ++ + H + H+ +K F C C K F + L+ H +H
Sbjct: 5 SSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEH-MKLH 63
Query: 1849 LGVHKPKFLNMECDYCSRKF 1868
+ C++
Sbjct: 64 SD-TRD----YICEFSGPSS 78
Score = 30.6 bits (70), Expect = 0.89
Identities = 15/69 (21%), Positives = 24/69 (34%), Gaps = 8/69 (11%)
Query: 108 CTEVFENLTLLRRHMRVKHPGEQNLPC--RLCDMSFSNKYQKKKHYSAFHKG-MPFIPSF 164
C +F N L H + +H +++ C C SF+ K K+H H +
Sbjct: 15 CGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEH-MKLHSDTRD----Y 69
Query: 165 TCPICQKIF 173
C
Sbjct: 70 ICEFSGPSS 78
>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding
protein, transcription/DNA complex; HET: DNA; 1.60A {Mus
musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A
1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A*
1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C
Length = 90
Score = 86.8 bits (216), Expect = 2e-20
Identities = 33/85 (38%), Positives = 49/85 (57%), Gaps = 5/85 (5%)
Query: 1016 EKPFCCHI--CGK--SLKGNLKDHILKCHTGERPYKCDVCGSSFKDKWYLGVHMRKHNGE 1071
E+P+ C + C + S G+L HI + HTG++P++C +C +F +L H+R H GE
Sbjct: 2 ERPYACPVESCDRRFSQSGSLTRHI-RIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGE 60
Query: 1072 KPYNCDYCGQTFAARSTFTFHLKKH 1096
KP+ CD CG+ FA H K H
Sbjct: 61 KPFACDICGRKFARSDERKRHTKIH 85
Score = 84.4 bits (210), Expect = 1e-19
Identities = 29/71 (40%), Positives = 41/71 (57%), Gaps = 3/71 (4%)
Query: 1004 GNLQKHMLSHTGEKPFCCHICGK--SLKGNLKDHILKCHTGERPYKCDVCGSSFKDKWYL 1061
G+L +H+ HTG+KPF C IC + S +L HI + HTGE+P+ CD+CG F
Sbjct: 20 GSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHI-RTHTGEKPFACDICGRKFARSDER 78
Query: 1062 GVHMRKHNGEK 1072
H + H +K
Sbjct: 79 KRHTKIHLRQK 89
Score = 69.8 bits (172), Expect = 2e-14
Identities = 26/69 (37%), Positives = 37/69 (53%), Gaps = 3/69 (4%)
Query: 1961 GNMKRHMLSHTGEKPFCCDICGK--SLKGNLKAHILRCQGERPYKCDVCGSSFKDKKHFS 2018
G++ RH+ HTG+KPF C IC + S +L HI GE+P+ CD+CG F
Sbjct: 20 GSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERK 79
Query: 2019 VHIRNH-GE 2026
H + H +
Sbjct: 80 RHTKIHLRQ 88
Score = 64.0 bits (157), Expect = 1e-12
Identities = 28/85 (32%), Positives = 41/85 (48%), Gaps = 9/85 (10%)
Query: 1511 FECDF--CKKKFYRNFDLQEHINTHTGNKPYQCQICNKSFGTRRNYRLHLKRHKRSAGQL 1568
+ C C ++F ++ L HI HTG KP+QC+IC ++F + HL H R+
Sbjct: 5 YACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNF----SRSDHLTTHIRTHTGE 60
Query: 1569 KPEDIHECKICHKIFLENSRLTRHM 1593
KP C IC + F + RH
Sbjct: 61 KP---FACDICGRKFARSDERKRHT 82
Score = 63.6 bits (156), Expect = 3e-12
Identities = 25/90 (27%), Positives = 37/90 (41%), Gaps = 9/90 (10%)
Query: 597 KRYMCDI--CGKQFTTLSYLDLHRKSHNETVKRKEEDKKYECDSCNKKFWSKRALSEHMI 654
+ Y C + C ++F+ L H + H K ++C C + F L+ H+
Sbjct: 3 RPYACPVESCDRRFSQSGSLTRHIRIHTG-------QKPFQCRICMRNFSRSDHLTTHIR 55
Query: 655 IHTGIKEHQCHVCNTAFYHIRSLSRHLKIH 684
HTG K C +C F RH KIH
Sbjct: 56 THTGEKPFACDICGRKFARSDERKRHTKIH 85
Score = 63.3 bits (155), Expect = 3e-12
Identities = 31/91 (34%), Positives = 46/91 (50%), Gaps = 12/91 (13%)
Query: 1475 KKYACDV--CGKQFTSTNRVSQHKAHSHFGIIKTIQRKFECDFCKKKFYRNFDLQEHINT 1532
+ YAC V C ++F+ + +++H I T Q+ F+C C + F R+ L HI T
Sbjct: 3 RPYACPVESCDRRFSQSGSLTRHI------RIHTGQKPFQCRICMRNFSRSDHLTTHIRT 56
Query: 1533 HTGNKPYQCQICNKSFGTRRNYRLHLKRHKR 1563
HTG KP+ C IC + F KRH +
Sbjct: 57 HTGEKPFACDICGRKF----ARSDERKRHTK 83
Score = 61.3 bits (150), Expect = 1e-11
Identities = 27/84 (32%), Positives = 41/84 (48%), Gaps = 8/84 (9%)
Query: 632 KKYECDS--CNKKFWSKRALSEHMIIHTGIKEHQCHVCNTAFYHIRSLSRHLKIH--EYN 687
+ Y C C+++F +L+ H+ IHTG K QC +C F L+ H++ H E
Sbjct: 3 RPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGE-- 60
Query: 688 ESKMYKCPVCSKMFTELYEMKRHR 711
K + C +C + F E KRH
Sbjct: 61 --KPFACDICGRKFARSDERKRHT 82
Score = 58.6 bits (143), Expect = 1e-10
Identities = 28/89 (31%), Positives = 39/89 (43%), Gaps = 9/89 (10%)
Query: 898 IERKFECDY--CKMKFKSKSFLSEHINTHTGNKPYQCQICKKSFANKRSYQRDLKRHKQL 955
+ER + C C +F L+ HI HTG KP+QC+IC ++F S L H +
Sbjct: 1 MERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNF----SRSDHLTTHIRT 56
Query: 956 AGQLKPEDIHECKICHKTFLEKGSLAKHM 984
KP C IC + F +H
Sbjct: 57 HTGEKP---FACDICGRKFARSDERKRHT 82
Score = 57.9 bits (141), Expect = 2e-10
Identities = 27/90 (30%), Positives = 44/90 (48%), Gaps = 12/90 (13%)
Query: 866 KKYVCDM--CGKQFTSNNRVSQHKAYSHFGIIKTIERKFECDYCKMKFKSKSFLSEHINT 923
+ Y C + C ++F+ + +++H I T ++ F+C C F L+ HI T
Sbjct: 3 RPYACPVESCDRRFSQSGSLTRHI------RIHTGQKPFQCRICMRNFSRSDHLTTHIRT 56
Query: 924 HTGNKPYQCQICKKSFANKRSYQRDLKRHK 953
HTG KP+ C IC + F + + KRH
Sbjct: 57 HTGEKPFACDICGRKF----ARSDERKRHT 82
Score = 57.1 bits (139), Expect = 5e-10
Identities = 23/87 (26%), Positives = 40/87 (45%), Gaps = 8/87 (9%)
Query: 575 CEKIFAAPKQMRMHLRHVHSSIKRYMCDICGKQFTTLSYLDLHRKSHNETVKRKEEDKKY 634
C++ F+ + H+R +H+ K + C IC + F+ +L H ++H +K +
Sbjct: 12 CDRRFSQSGSLTRHIR-IHTGQKPFQCRICMRNFSRSDHLTTHIRTHTG-------EKPF 63
Query: 635 ECDSCNKKFWSKRALSEHMIIHTGIKE 661
CD C +KF H IH K+
Sbjct: 64 ACDICGRKFARSDERKRHTKIHLRQKD 90
Score = 51.7 bits (125), Expect = 3e-08
Identities = 28/86 (32%), Positives = 41/86 (47%), Gaps = 10/86 (11%)
Query: 1324 KRYLCDI--CGKQFTSTNRVNIHKACVHSSTGNK-FECIYCKKKYRRKFDLKEHINKHTG 1380
+ Y C + C ++F+ + + H +H TG K F+C C + + R L HI HTG
Sbjct: 3 RPYACPVESCDRRFSQSGSLTRHIR-IH--TGQKPFQCRICMRNFSRSDHLTTHIRTHTG 59
Query: 1381 NKPYHCQICKESFYTLKTYRGDLKRH 1406
KP+ C IC F + KRH
Sbjct: 60 EKPFACDICGRKF----ARSDERKRH 81
Score = 50.9 bits (123), Expect = 7e-08
Identities = 27/82 (32%), Positives = 42/82 (51%), Gaps = 5/82 (6%)
Query: 1302 CHKTYSTPKTMRRHLRQVHTSQKRYLCDICGKQFTSTNRVNIHKACVHSSTGNK-FECIY 1360
C + +S ++ RH+R +HT QK + C IC + F+ ++ + H H TG K F C
Sbjct: 12 CDRRFSQSGSLTRHIR-IHTGQKPFQCRICMRNFSRSDHLTTHIR-TH--TGEKPFACDI 67
Query: 1361 CKKKYRRKFDLKEHINKHTGNK 1382
C +K+ R + K H H K
Sbjct: 68 CGRKFARSDERKRHTKIHLRQK 89
Score = 50.2 bits (121), Expect = 1e-07
Identities = 23/85 (27%), Positives = 39/85 (45%), Gaps = 7/85 (8%)
Query: 844 CHKTYSTPKSMRKHLREVHSSQKKYVCDMCGKQFTSNNRVSQHKAYSHFGIIKTIERKFE 903
C + +S S+ +H+R +H+ QK + C +C + F+ ++ ++ H T E+ F
Sbjct: 12 CDRRFSQSGSLTRHIR-IHTGQKPFQCRICMRNFSRSDHLTTHI------RTHTGEKPFA 64
Query: 904 CDYCKMKFKSKSFLSEHINTHTGNK 928
CD C KF H H K
Sbjct: 65 CDICGRKFARSDERKRHTKIHLRQK 89
Score = 47.8 bits (115), Expect = 8e-07
Identities = 25/94 (26%), Positives = 43/94 (45%), Gaps = 16/94 (17%)
Query: 1450 KCPV--CHKTYSTP----RQMRIHLREAHSQKKYACDVCGKQFTSTNRVSQHKAHSHFGI 1503
CPV C + +S R +RIH + K + C +C + F+ ++ ++ H
Sbjct: 6 ACPVESCDRRFSQSGSLTRHIRIHTGQ----KPFQCRICMRNFSRSDHLTTHI------R 55
Query: 1504 IKTIQRKFECDFCKKKFYRNFDLQEHINTHTGNK 1537
T ++ F CD C +KF R+ + + H H K
Sbjct: 56 THTGEKPFACDICGRKFARSDERKRHTKIHLRQK 89
Score = 42.1 bits (100), Expect = 9e-05
Identities = 22/87 (25%), Positives = 35/87 (40%), Gaps = 18/87 (20%)
Query: 374 CTKIFTTAKHMRVHLRSVHNGKERKFICDICGKQFTSNIHASRH-------KNYAHSRDR 426
C + F+ + + H+R +H G ++ F C IC + F+ + H + H K +
Sbjct: 12 CDRRFSQSGSLTRHIR-IHTG-QKPFQCRICMRNFSRSDHLTTHIRTHTGEKPF------ 63
Query: 427 QKMECDYCKRKFTCKRYLAEHINAHTG 453
CD C RKF H H
Sbjct: 64 ---ACDICGRKFARSDERKRHTKIHLR 87
Score = 40.9 bits (97), Expect = 2e-04
Identities = 28/111 (25%), Positives = 40/111 (36%), Gaps = 33/111 (29%)
Query: 1864 CSRKFPSKNEVTNHIKSHMGVRDILCPICKKGFIALKHMKTHLKKHMWKAGEIPLEDTYL 1923
C R+F +T HI+ H G + C IC + F H+ TH++ H GE P +
Sbjct: 12 CDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTH---TGEKP----FA 64
Query: 1924 CDLCSKVFLEHKDMIRHREWVHGDKCHVCKVCGAKIKGNMKRHMLSHTGEK 1974
CD+C + F KRH H +K
Sbjct: 65 CDICGRKFARS--------------------------DERKRHTKIHLRQK 89
Score = 39.4 bits (93), Expect = 9e-04
Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 18/89 (20%)
Query: 396 ERKFICDI--CGKQFTSNIHASRH-------KNYAHSRDRQKMECDYCKRKFTCKRYLAE 446
ER + C + C ++F+ + +RH K + +C C R F+ +L
Sbjct: 2 ERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPF---------QCRICMRNFSRSDHLTT 52
Query: 447 HINAHTGNTIYGCRICKKTFLYTNGLRRH 475
HI HTG + C IC + F ++ +RH
Sbjct: 53 HIRTHTGEKPFACDICGRKFARSDERKRH 81
Score = 36.7 bits (86), Expect = 0.006
Identities = 26/83 (31%), Positives = 42/83 (50%), Gaps = 7/83 (8%)
Query: 1801 CNKEYATPVTMRKHLREVHVSKKKFKCDLCQKQFKASRSLQCHKQFVHLGVHKPKFLNME 1860
C++ ++ ++ +H+R +H +K F+C +C + F S L H + H G KP
Sbjct: 12 CDRRFSQSGSLTRHIR-IHTGQKPFQCRICMRNFSRSDHLTTHIR-THTG-EKP----FA 64
Query: 1861 CDYCSRKFPSKNEVTNHIKSHMG 1883
CD C RKF +E H K H+
Sbjct: 65 CDICGRKFARSDERKRHTKIHLR 87
Score = 35.9 bits (84), Expect = 0.014
Identities = 19/49 (38%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Query: 370 QCPLCTKIFTTAKHMRVHLRSVHNGKERKFICDICGKQFTSNIHASRHK 418
QC +C + F+ + H+ H+R H G E+ F CDICG++F + RH
Sbjct: 36 QCRICMRNFSRSDHLTTHIR-THTG-EKPFACDICGRKFARSDERKRHT 82
Score = 35.5 bits (83), Expect = 0.016
Identities = 20/56 (35%), Positives = 26/56 (46%), Gaps = 7/56 (12%)
Query: 752 FHCDTCGKYFRSRQICNKHIKRVHLNPT--KTFKCDLCSDRFSTSAKLKKHVDKIH 805
F C C + F H R H T K F CD+C +F+ S + K+H KIH
Sbjct: 35 FQCRICMRNFSRSDHLTTH-IRTH---TGEKPFACDICGRKFARSDERKRHT-KIH 85
Score = 31.3 bits (72), Expect = 0.61
Identities = 17/43 (39%), Positives = 23/43 (53%)
Query: 434 CKRKFTCKRYLAEHINAHTGNTIYGCRICKKTFLYTNGLRRHI 476
C R+F+ L HI HTG + CRIC + F ++ L HI
Sbjct: 12 CDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHI 54
Score = 30.5 bits (70), Expect = 1.0
Identities = 15/53 (28%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Query: 1798 CPVCNKEYATPVTMRKHLREVHVSKKKFKCDLCQKQFKASRSLQCHKQFVHLG 1850
C +C + ++ + H+R H +K F CD+C ++F S + H + +HL
Sbjct: 37 CRICMRNFSRSDHLTTHIR-THTGEKPFACDICGRKFARSDERKRHTK-IHLR 87
Score = 29.7 bits (68), Expect = 1.9
Identities = 13/31 (41%), Positives = 15/31 (48%), Gaps = 3/31 (9%)
Query: 1999 ERPYKCDV--CGSSFKDKKHFSVHIRNH-GE 2026
ERPY C V C F + HIR H G+
Sbjct: 2 ERPYACPVESCDRRFSQSGSLTRHIRIHTGQ 32
Score = 29.7 bits (68), Expect = 2.2
Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Query: 104 TCRICTEVFENLTLLRRHMRVKHPGEQNLPCRLCDMSFSNKYQKKKH 150
CRIC F L H+R H GE+ C +C F+ ++K+H
Sbjct: 36 QCRICMRNFSRSDHLTTHIRT-HTGEKPFACDICGRKFARSDERKRH 81
Score = 29.4 bits (67), Expect = 2.5
Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 7/51 (13%)
Query: 757 CGKYFRSRQICNKHIKRVHLNPT--KTFKCDLCSDRFSTSAKLKKHVDKIH 805
C + F +H R+H T K F+C +C FS S L H+ + H
Sbjct: 12 CDRRFSQSGSLTRH-IRIH---TGQKPFQCRICMRNFSRSDHLTTHI-RTH 57
>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA
binding, transcription, C2H2 type zinc finger, structural
genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
g.37.1.1
Length = 70
Score = 83.3 bits (207), Expect = 1e-19
Identities = 18/57 (31%), Positives = 26/57 (45%)
Query: 1040 HTGERPYKCDVCGSSFKDKWYLGVHMRKHNGEKPYNCDYCGQTFAARSTFTFHLKKH 1096
+ P KC C S K L +H R H ++P+ C+YC S + H+KK
Sbjct: 4 GSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKF 60
Score = 79.9 bits (198), Expect = 3e-18
Identities = 20/67 (29%), Positives = 29/67 (43%), Gaps = 3/67 (4%)
Query: 1012 SHTGEKPFCCHICGKSL--KGNLKDHILKCHTGERPYKCDVCGSSFKDKWYLGVHMRKHN 1069
S + P C C S K L+ H + H +RP+KC+ C K L HM+K +
Sbjct: 3 SGSSGHPEKCSECSYSCSSKAALRIH-ERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFH 61
Query: 1070 GEKPYNC 1076
G+
Sbjct: 62 GDMSGPS 68
Score = 62.9 bits (154), Expect = 3e-12
Identities = 17/61 (27%), Positives = 26/61 (42%), Gaps = 3/61 (4%)
Query: 1969 SHTGEKPFCCDICGKSL--KGNLKAHILRCQGERPYKCDVCGSSFKDKKHFSVHIRNH-G 2025
S + P C C S K L+ H +RP+KC+ C K + S H++ G
Sbjct: 3 SGSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHG 62
Query: 2026 E 2026
+
Sbjct: 63 D 63
Score = 55.6 bits (135), Expect = 8e-10
Identities = 15/73 (20%), Positives = 26/73 (35%), Gaps = 7/73 (9%)
Query: 592 VHSSIKRYMCDICGKQFTTLSYLDLHRKSHNETVKRKEEDKKYECDSCNKKFWSKRALSE 651
SS C C ++ + L +H + H D+ ++C+ C+ LS+
Sbjct: 3 SGSSGHPEKCSECSYSCSSKAALRIHERIHCT-------DRPFKCNYCSFDTKQPSNLSK 55
Query: 652 HMIIHTGIKEHQC 664
HM G
Sbjct: 56 HMKKFHGDMSGPS 68
Score = 54.0 bits (131), Expect = 3e-09
Identities = 15/54 (27%), Positives = 24/54 (44%)
Query: 631 DKKYECDSCNKKFWSKRALSEHMIIHTGIKEHQCHVCNTAFYHIRSLSRHLKIH 684
+C C+ SK AL H IH + +C+ C+ +LS+H+K
Sbjct: 7 GHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKF 60
Score = 52.1 bits (126), Expect = 1e-08
Identities = 11/51 (21%), Positives = 20/51 (39%)
Query: 1511 FECDFCKKKFYRNFDLQEHINTHTGNKPYQCQICNKSFGTRRNYRLHLKRH 1561
+C C L+ H H ++P++C C+ N H+K+
Sbjct: 10 EKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKF 60
Score = 51.7 bits (125), Expect = 2e-08
Identities = 18/72 (25%), Positives = 27/72 (37%), Gaps = 6/72 (8%)
Query: 861 VHSSQKKYVCDMCGKQFTSNNRVSQHKAYSHFGIIKTIERKFECDYCKMKFKSKSFLSEH 920
SS C C +S + H+ I +R F+C+YC K S LS+H
Sbjct: 3 SGSSGHPEKCSECSYSCSSKAALRIHER------IHCTDRPFKCNYCSFDTKQPSNLSKH 56
Query: 921 INTHTGNKPYQC 932
+ G+
Sbjct: 57 MKKFHGDMSGPS 68
Score = 50.6 bits (122), Expect = 5e-08
Identities = 11/56 (19%), Positives = 22/56 (39%)
Query: 897 TIERKFECDYCKMKFKSKSFLSEHINTHTGNKPYQCQICKKSFANKRSYQRDLKRH 952
+ +C C SK+ L H H ++P++C C + + +K+
Sbjct: 5 SSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKF 60
Score = 48.6 bits (117), Expect = 2e-07
Identities = 15/69 (21%), Positives = 29/69 (42%), Gaps = 4/69 (5%)
Query: 1319 VHTSQKRYLCDICGKQFTSTNRVNIHKACVHSSTGNK-FECIYCKKKYRRKFDLKEHINK 1377
+S C C +S + IH+ +H ++ F+C YC ++ +L +H+ K
Sbjct: 3 SGSSGHPEKCSECSYSCSSKAALRIHER-IH--CTDRPFKCNYCSFDTKQPSNLSKHMKK 59
Query: 1378 HTGNKPYHC 1386
G+
Sbjct: 60 FHGDMSGPS 68
Score = 47.9 bits (115), Expect = 4e-07
Identities = 17/69 (24%), Positives = 30/69 (43%), Gaps = 7/69 (10%)
Query: 1532 THTGNKPYQCQICNKSFGTRRNYRLHLKRHKRSAGQLKPEDIHECKICHKIFLENSRLTR 1591
+ + P +C C+ S + + L+ H+R +P +C C + S L++
Sbjct: 3 SGSSGHPEKCSECSYSC----SSKAALRIHERIHCTDRP---FKCNYCSFDTKQPSNLSK 55
Query: 1592 HMNFTHGDK 1600
HM HGD
Sbjct: 56 HMKKFHGDM 64
Score = 47.1 bits (113), Expect = 9e-07
Identities = 18/100 (18%), Positives = 26/100 (26%), Gaps = 39/100 (39%)
Query: 923 THTGNKPYQCQICKKSFANKRSYQRDLKRHKQLAGQLKPEDIHECKICHKTFLEKGSLAK 982
+ + P +C C S + K +L
Sbjct: 3 SGSSGHPEKCSECSYSCS-----------------------------------SKAALRI 27
Query: 983 HMNWVH-GDKCHICKVCG--AKIKGNLQKHMLSHTGEKPF 1019
H +H D+ C C K NL KHM G+
Sbjct: 28 HER-IHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMSG 66
Score = 44.0 bits (105), Expect = 1e-05
Identities = 12/67 (17%), Positives = 23/67 (34%), Gaps = 6/67 (8%)
Query: 1475 KKYACDVCGKQFTSTNRVSQHKAHSHFGIIKTIQRKFECDFCKKKFYRNFDLQEHINTHT 1534
C C +S + H+ I R F+C++C + +L +H+
Sbjct: 8 HPEKCSECSYSCSSKAALRIHER------IHCTDRPFKCNYCSFDTKQPSNLSKHMKKFH 61
Query: 1535 GNKPYQC 1541
G+
Sbjct: 62 GDMSGPS 68
Score = 42.1 bits (100), Expect = 6e-05
Identities = 11/56 (19%), Positives = 19/56 (33%), Gaps = 5/56 (8%)
Query: 1352 TGNK-FECIYCKKKYRRKFDLKEHINKHTGNKPYHCQICKESFYTLKTYRGDLKRH 1406
+ +C C K L+ H H ++P+ C C +L +H
Sbjct: 5 SSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDT----KQPSNLSKH 56
Score = 42.1 bits (100), Expect = 6e-05
Identities = 5/31 (16%), Positives = 12/31 (38%)
Query: 1066 RKHNGEKPYNCDYCGQTFAARSTFTFHLKKH 1096
+ P C C + ++++ H + H
Sbjct: 2 SSGSSGHPEKCSECSYSCSSKAALRIHERIH 32
Score = 38.2 bits (90), Expect = 0.001
Identities = 13/58 (22%), Positives = 19/58 (32%), Gaps = 4/58 (6%)
Query: 1922 YLCDLCSKVFLEHKDMIRHREWVH-GDKCHVCKVCG--AKIKGNMKRHMLSHTGEKPF 1976
C CS + H +H D+ C C K N+ +HM G+
Sbjct: 10 EKCSECSYSCSSKAALRIHER-IHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMSG 66
Score = 37.5 bits (88), Expect = 0.002
Identities = 11/58 (18%), Positives = 23/58 (39%), Gaps = 6/58 (10%)
Query: 656 HTGIKEHQCHVCNTAFYHIRSLSRHLKIH--EYNESKMYKCPVCSKMFTELYEMKRHR 711
+ +C C+ + +L H +IH + + +KC CS + + +H
Sbjct: 4 GSSGHPEKCSECSYSCSSKAALRIHERIHCTD----RPFKCNYCSFDTKQPSNLSKHM 57
Score = 34.8 bits (81), Expect = 0.024
Identities = 11/71 (15%), Positives = 20/71 (28%), Gaps = 17/71 (23%)
Query: 390 SVHNGKERKFICDICGKQFTSNIHASRH-------KNYAHSRDRQKMECDYCKRKFTCKR 442
S + C C +S H + + +C+YC
Sbjct: 2 SSGSS-GHPEKCSECSYSCSSKAALRIHERIHCTDRPF---------KCNYCSFDTKQPS 51
Query: 443 YLAEHINAHTG 453
L++H+ G
Sbjct: 52 NLSKHMKKFHG 62
Score = 33.2 bits (77), Expect = 0.076
Identities = 15/54 (27%), Positives = 22/54 (40%), Gaps = 7/54 (12%)
Query: 754 CDTCGKYFRSRQICNKHIKRVHLNPT--KTFKCDLCSDRFSTSAKLKKHVDKIH 805
C C S+ H +R+H + FKC+ CS + L KH+ K
Sbjct: 12 CSECSYSCSSKAALRIH-ERIH---CTDRPFKCNYCSFDTKQPSNLSKHM-KKF 60
Score = 32.5 bits (75), Expect = 0.12
Identities = 15/66 (22%), Positives = 27/66 (40%), Gaps = 6/66 (9%)
Query: 1818 VHVSKKKFKCDLCQKQFKASRSLQCHKQFVHLGVHKPKFLNMECDYCSRKFPSKNEVTNH 1877
S KC C + +L+ H + +H +P +C+YCS + ++ H
Sbjct: 3 SGSSGHPEKCSECSYSCSSKAALRIH-ERIHCTD-RP----FKCNYCSFDTKQPSNLSKH 56
Query: 1878 IKSHMG 1883
+K G
Sbjct: 57 MKKFHG 62
Score = 31.3 bits (72), Expect = 0.38
Identities = 10/46 (21%), Positives = 16/46 (34%)
Query: 430 ECDYCKRKFTCKRYLAEHINAHTGNTIYGCRICKKTFLYTNGLRRH 475
+C C + K L H H + + C C + L +H
Sbjct: 11 KCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKH 56
Score = 30.9 bits (71), Expect = 0.45
Identities = 12/48 (25%), Positives = 22/48 (45%), Gaps = 2/48 (4%)
Query: 371 CPLCTKIFTTAKHMRVHLRSVHNGKERKFICDICGKQFTSNIHASRHK 418
C C+ ++ +R+H R +H +R F C+ C + S+H
Sbjct: 12 CSECSYSCSSKAALRIHER-IHCT-DRPFKCNYCSFDTKQPSNLSKHM 57
Score = 29.0 bits (66), Expect = 2.2
Identities = 7/31 (22%), Positives = 11/31 (35%), Gaps = 4/31 (12%)
Query: 1377 KHTGNKPYHCQICKESFYTLKTYRGDLKRHE 1407
+ P C C S + + L+ HE
Sbjct: 3 SGSSGHPEKCSECSYSC----SSKAALRIHE 29
Score = 27.8 bits (63), Expect = 6.2
Identities = 13/50 (26%), Positives = 19/50 (38%)
Query: 1860 ECDYCSRKFPSKNEVTNHIKSHMGVRDILCPICKKGFIALKHMKTHLKKH 1909
+C CS SK + H + H R C C ++ H+KK
Sbjct: 11 KCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKF 60
>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural
genomics consortiu PSI-biology, protein structure
initiative; NMR {Homo sapiens}
Length = 74
Score = 82.9 bits (206), Expect = 3e-19
Identities = 29/72 (40%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 1005 NLQKHMLSHTGEKPFCCHICGK--SLKGNLKDHILKCHTGERPYKCDVCGSSFKDKWYLG 1062
+ H +KP+ C C KGNL H HTGE+PY+C++CG+ F L
Sbjct: 4 HHHHHSHMTHSDKPYKCDRCQASFRYKGNLASH-KTVHTGEKPYRCNICGAQFNRPANLK 62
Query: 1063 VHMRKHNGEKPY 1074
H R H+GEKPY
Sbjct: 63 THTRIHSGEKPY 74
Score = 74.0 bits (183), Expect = 4e-16
Identities = 23/57 (40%), Positives = 30/57 (52%)
Query: 1040 HTGERPYKCDVCGSSFKDKWYLGVHMRKHNGEKPYNCDYCGQTFAARSTFTFHLKKH 1096
++PYKCD C +SF+ K L H H GEKPY C+ CG F + H + H
Sbjct: 12 THSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIH 68
Score = 59.8 bits (146), Expect = 3e-11
Identities = 24/68 (35%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Query: 1962 NMKRHMLSHTGEKPFCCDICGK--SLKGNLKAHILRCQGERPYKCDVCGSSFKDKKHFSV 2019
+ H +KP+ CD C KGNL +H GE+PY+C++CG+ F +
Sbjct: 4 HHHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKT 63
Query: 2020 HIRNH-GE 2026
H R H GE
Sbjct: 64 HTRIHSGE 71
Score = 56.7 bits (138), Expect = 4e-10
Identities = 31/72 (43%), Positives = 40/72 (55%), Gaps = 5/72 (6%)
Query: 979 SLAKHMNWVHGDKCHICKVCGA--KIKGNLQKHMLSHTGEKPFCCHICGK--SLKGNLKD 1034
H + H DK + C C A + KGNL H HTGEKP+ C+ICG + NLK
Sbjct: 4 HHHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKT 63
Query: 1035 HILKCHTGERPY 1046
H + H+GE+PY
Sbjct: 64 H-TRIHSGEKPY 74
Score = 54.4 bits (132), Expect = 3e-09
Identities = 20/68 (29%), Positives = 27/68 (39%), Gaps = 7/68 (10%)
Query: 1526 LQEHINTHTGNKPYQCQICNKSFGTRRNYRLHLKRHKRSAGQLKPEDIHECKICHKIFLE 1585
H + +KPY+C C SF Y+ +L HK KP + C IC F
Sbjct: 5 HHHHSHMTHSDKPYKCDRCQASF----RYKGNLASHKTVHTGEKP---YRCNICGAQFNR 57
Query: 1586 NSRLTRHM 1593
+ L H
Sbjct: 58 PANLKTHT 65
Score = 51.7 bits (125), Expect = 2e-08
Identities = 22/73 (30%), Positives = 33/73 (45%), Gaps = 7/73 (9%)
Query: 612 SYLDLHRKSHNETVKRKEEDKKYECDSCNKKFWSKRALSEHMIIHTGIKEHQCHVCNTAF 671
+ H + DK Y+CD C F K L+ H +HTG K ++C++C F
Sbjct: 3 HHHHHHSHMTHS-------DKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQF 55
Query: 672 YHIRSLSRHLKIH 684
+L H +IH
Sbjct: 56 NRPANLKTHTRIH 68
Score = 51.7 bits (125), Expect = 3e-08
Identities = 21/53 (39%), Positives = 27/53 (50%), Gaps = 4/53 (7%)
Query: 1511 FECDFCKKKFYRNFDLQEHINTHTGNKPYQCQICNKSFGTRRNYRLHLKRHKR 1563
++CD C+ F +L H HTG KPY+C IC F N +LK H R
Sbjct: 18 YKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQF----NRPANLKTHTR 66
Score = 50.5 bits (122), Expect = 7e-08
Identities = 26/105 (24%), Positives = 38/105 (36%), Gaps = 33/105 (31%)
Query: 915 SFLSEHINTHTGNKPYQCQICKKSFANKRSYQRDLKRHKQLAGQLKPEDIHECKICHKTF 974
H + +KPY+C C+ SF Y+ +L HK + KP + C IC F
Sbjct: 3 HHHHHHSHMTHSDKPYKCDRCQASF----RYKGNLASHKTVHTGEKP---YRCNICGAQF 55
Query: 975 LEKGSLAKHMNWVHGDKCHICKVCGAKIKGNLQKHMLSHTGEKPF 1019
+L H +I H+GEKP+
Sbjct: 56 NRPANLKTHT----------------RI----------HSGEKPY 74
Score = 49.4 bits (119), Expect = 1e-07
Identities = 20/76 (26%), Positives = 33/76 (43%), Gaps = 10/76 (13%)
Query: 1464 MRIHLREAHSQKKYACDVCGKQFTSTNRVSQHKAHSHFGIIKTIQRKFECDFCKKKFYRN 1523
+ + K Y CD C F ++ HK + T ++ + C+ C +F R
Sbjct: 9 SHMTHSD----KPYKCDRCQASFRYKGNLASHK------TVHTGEKPYRCNICGAQFNRP 58
Query: 1524 FDLQEHINTHTGNKPY 1539
+L+ H H+G KPY
Sbjct: 59 ANLKTHTRIHSGEKPY 74
Score = 49.4 bits (119), Expect = 1e-07
Identities = 23/76 (30%), Positives = 29/76 (38%), Gaps = 10/76 (13%)
Query: 588 HLRH---VHSSIKRYMCDICGKQFTTLSYLDLHRKSHNETVKRKEEDKKYECDSCNKKFW 644
H H + S K Y CD C F L H+ H +K Y C+ C +F
Sbjct: 4 HHHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTG-------EKPYRCNICGAQFN 56
Query: 645 SKRALSEHMIIHTGIK 660
L H IH+G K
Sbjct: 57 RPANLKTHTRIHSGEK 72
Score = 49.4 bits (119), Expect = 2e-07
Identities = 22/76 (28%), Positives = 32/76 (42%), Gaps = 7/76 (9%)
Query: 855 RKHLREVHSSQKKYVCDMCGKQFTSNNRVSQHKAYSHFGIIKTIERKFECDYCKMKFKSK 914
H + S K Y CD C F ++ HK + T E+ + C+ C +F
Sbjct: 6 HHHSH-MTHSDKPYKCDRCQASFRYKGNLASHK------TVHTGEKPYRCNICGAQFNRP 58
Query: 915 SFLSEHINTHTGNKPY 930
+ L H H+G KPY
Sbjct: 59 ANLKTHTRIHSGEKPY 74
Score = 49.0 bits (118), Expect = 2e-07
Identities = 26/73 (35%), Positives = 33/73 (45%), Gaps = 5/73 (6%)
Query: 1313 RRHLRQVHTSQKRYLCDICGKQFTSTNRVNIHKACVHSSTGNK-FECIYCKKKYRRKFDL 1371
H + S K Y CD C F + HK VH TG K + C C ++ R +L
Sbjct: 6 HHHSH-MTHSDKPYKCDRCQASFRYKGNLASHKT-VH--TGEKPYRCNICGAQFNRPANL 61
Query: 1372 KEHINKHTGNKPY 1384
K H H+G KPY
Sbjct: 62 KTHTRIHSGEKPY 74
Score = 48.2 bits (116), Expect = 4e-07
Identities = 16/65 (24%), Positives = 27/65 (41%), Gaps = 6/65 (9%)
Query: 649 LSEHMIIHTGIKEHQCHVCNTAFYHIRSLSRHLKIH--EYNESKMYKCPVCSKMFTELYE 706
H + K ++C C +F + +L+ H +H E K Y+C +C F
Sbjct: 5 HHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGE----KPYRCNICGAQFNRPAN 60
Query: 707 MKRHR 711
+K H
Sbjct: 61 LKTHT 65
Score = 47.4 bits (114), Expect = 7e-07
Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 4/59 (6%)
Query: 895 IKTIERKFECDYCKMKFKSKSFLSEHINTHTGNKPYQCQICKKSFANKRSYQRDLKRHK 953
+ ++ ++CD C+ F+ K L+ H HTG KPY+C IC F + LK H
Sbjct: 11 MTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPAN----LKTHT 65
Score = 45.1 bits (108), Expect = 5e-06
Identities = 27/61 (44%), Positives = 34/61 (55%), Gaps = 4/61 (6%)
Query: 1946 GDKCHVCKVCGA--KIKGNMKRHMLSHTGEKPFCCDICGK--SLKGNLKAHILRCQGERP 2001
DK + C C A + KGN+ H HTGEKP+ C+ICG + NLK H GE+P
Sbjct: 14 SDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGEKP 73
Query: 2002 Y 2002
Y
Sbjct: 74 Y 74
Score = 44.8 bits (107), Expect = 7e-06
Identities = 10/37 (27%), Positives = 15/37 (40%)
Query: 1060 YLGVHMRKHNGEKPYNCDYCGQTFAARSTFTFHLKKH 1096
+ H + +KPY CD C +F + H H
Sbjct: 4 HHHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVH 40
Score = 38.6 bits (91), Expect = 0.001
Identities = 26/79 (32%), Positives = 36/79 (45%), Gaps = 9/79 (11%)
Query: 1902 MKTHLKKHM-WKAGEIPLEDTYLCDLCSKVFLEHKDMIRHREWVH-GDKCHVCKVCGA-- 1957
M H H + P Y CD C F ++ H+ VH G+K + C +CGA
Sbjct: 1 MGHHHHHHSHMTHSDKP----YKCDRCQASFRYKGNLASHKT-VHTGEKPYRCNICGAQF 55
Query: 1958 KIKGNMKRHMLSHTGEKPF 1976
N+K H H+GEKP+
Sbjct: 56 NRPANLKTHTRIHSGEKPY 74
Score = 35.1 bits (82), Expect = 0.015
Identities = 18/46 (39%), Positives = 21/46 (45%)
Query: 430 ECDYCKRKFTCKRYLAEHINAHTGNTIYGCRICKKTFLYTNGLRRH 475
+CD C+ F K LA H HTG Y C IC F L+ H
Sbjct: 19 KCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTH 64
Score = 33.6 bits (78), Expect = 0.061
Identities = 16/78 (20%), Positives = 26/78 (33%), Gaps = 18/78 (23%)
Query: 383 HMRVHLRSVHNGKERKFICDICGKQFTSNIHASRH-------KNYAHSRDRQKMECDYCK 435
H H + + ++ + CD C F + + H K Y C+ C
Sbjct: 4 HHHHHSH-MTHS-DKPYKCDRCQASFRYKGNLASHKTVHTGEKPY---------RCNICG 52
Query: 436 RKFTCKRYLAEHINAHTG 453
+F L H H+G
Sbjct: 53 AQFNRPANLKTHTRIHSG 70
Score = 33.2 bits (77), Expect = 0.075
Identities = 15/48 (31%), Positives = 21/48 (43%), Gaps = 2/48 (4%)
Query: 371 CPLCTKIFTTAKHMRVHLRSVHNGKERKFICDICGKQFTSNIHASRHK 418
C C F ++ H VH G E+ + C+ICG QF + H
Sbjct: 20 CDRCQASFRYKGNLASHKT-VHTG-EKPYRCNICGAQFNRPANLKTHT 65
Score = 32.0 bits (74), Expect = 0.19
Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 7/54 (12%)
Query: 754 CDTCGKYFRSRQICNKHIKRVHLNPT--KTFKCDLCSDRFSTSAKLKKHVDKIH 805
CD C FR + H K VH T K ++C++C +F+ A LK H +IH
Sbjct: 20 CDRCQASFRYKGNLASH-KTVH---TGEKPYRCNICGAQFNRPANLKTH-TRIH 68
Score = 31.7 bits (73), Expect = 0.32
Identities = 23/72 (31%), Positives = 31/72 (43%), Gaps = 7/72 (9%)
Query: 1812 RKHLREVHVSKKKFKCDLCQKQFKASRSLQCHKQFVHLGVHKPKFLNMECDYCSRKFPSK 1871
H + S K +KCD CQ F+ +L HK VH G KP C+ C +F
Sbjct: 6 HHHSH-MTHSDKPYKCDRCQASFRYKGNLASHKT-VHTG-EKP----YRCNICGAQFNRP 58
Query: 1872 NEVTNHIKSHMG 1883
+ H + H G
Sbjct: 59 ANLKTHTRIHSG 70
Score = 30.9 bits (71), Expect = 0.60
Identities = 12/36 (33%), Positives = 17/36 (47%), Gaps = 4/36 (11%)
Query: 1371 LKEHINKHTGNKPYHCQICKESFYTLKTYRGDLKRH 1406
H + +KPY C C+ SF Y+G+L H
Sbjct: 5 HHHHSHMTHSDKPYKCDRCQASF----RYKGNLASH 36
>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper,
X-RAY crystallography, structure-based design, zinc
fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1
PDB: 1xf7_A
Length = 88
Score = 80.6 bits (200), Expect = 2e-18
Identities = 25/82 (30%), Positives = 34/82 (41%), Gaps = 8/82 (9%)
Query: 1017 KPFCCHICGK--SLKGNLKDHILKCHTGERPYKCDVCGSSFKDKWYLGVHMRKHNGEKPY 1074
KPF C IC + S +L HI + HTGE+P+ CD+CG F H P
Sbjct: 2 KPFQCRICMRNFSRSDHLTTHI-RTHTGEKPFACDICGRKFARSDERKRHRDIQ-HILPI 59
Query: 1075 NCDYCGQTFAARSTFTFHLKKH 1096
D + + HL+
Sbjct: 60 LEDKVEELLSKNY----HLENE 77
Score = 74.1 bits (183), Expect = 4e-16
Identities = 24/89 (26%), Positives = 36/89 (40%), Gaps = 9/89 (10%)
Query: 991 KCHICKVCGAK--IKGNLQKHMLSHTGEKPFCCHICGK--SLKGNLKDHILKCHTGERPY 1046
K C++C +L H+ +HTGEKPF C ICG+ + K H P
Sbjct: 2 KPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHR-DIQH-ILPI 59
Query: 1047 KCDVCGSSFKDKWYLGVH---MRKHNGEK 1072
D ++L ++K GE+
Sbjct: 60 LEDKVEELLSKNYHLENEVARLKKLVGER 88
Score = 67.9 bits (167), Expect = 7e-14
Identities = 22/79 (27%), Positives = 31/79 (39%), Gaps = 5/79 (6%)
Query: 1948 KCHVCKVCGAK--IKGNMKRHMLSHTGEKPFCCDICGK--SLKGNLKAHILRCQGERPYK 2003
K C++C ++ H+ +HTGEKPF CDICG+ + K H Q P
Sbjct: 2 KPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHR-DIQHILPIL 60
Query: 2004 CDVCGSSFKDKKHFSVHIR 2022
D H +
Sbjct: 61 EDKVEELLSKNYHLENEVA 79
Score = 65.2 bits (160), Expect = 6e-13
Identities = 24/83 (28%), Positives = 34/83 (40%), Gaps = 8/83 (9%)
Query: 1511 FECDFCKKKFYRNFDLQEHINTHTGNKPYQCQICNKSFGTRRNYRLHLKRHKRSAGQLKP 1570
F+C C + F R+ L HI THTG KP+ C IC + F KRH+ P
Sbjct: 4 FQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKF----ARSDERKRHRDIQHI-LP 58
Query: 1571 EDIHECKICHKIFLENSRLTRHM 1593
++ +N L +
Sbjct: 59 ---ILEDKVEELLSKNYHLENEV 78
Score = 64.1 bits (157), Expect = 1e-12
Identities = 17/82 (20%), Positives = 30/82 (36%), Gaps = 3/82 (3%)
Query: 632 KKYECDSCNKKFWSKRALSEHMIIHTGIKEHQCHVCNTAFYHIRSLSRHLKIHEYNESKM 691
K ++C C + F L+ H+ HTG K C +C F RH I +
Sbjct: 2 KPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQ--HI-LP 58
Query: 692 YKCPVCSKMFTELYEMKRHRDH 713
++ ++ Y ++
Sbjct: 59 ILEDKVEELLSKNYHLENEVAR 80
Score = 62.1 bits (152), Expect = 7e-12
Identities = 19/55 (34%), Positives = 28/55 (50%)
Query: 1044 RPYKCDVCGSSFKDKWYLGVHMRKHNGEKPYNCDYCGQTFAARSTFTFHLKKHEE 1098
+P++C +C +F +L H+R H GEKP+ CD CG+ FA H
Sbjct: 2 KPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHI 56
Score = 61.4 bits (150), Expect = 2e-11
Identities = 24/116 (20%), Positives = 37/116 (31%), Gaps = 31/116 (26%)
Query: 902 FECDYCKMKFKSKSFLSEHINTHTGNKPYQCQICKKSFANKRSYQRDLKRHKQLAGQLKP 961
F+C C F L+ HI THTG KP+ C IC + F + + KRH+ + P
Sbjct: 4 FQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKF----ARSDERKRHRDIQHI-LP 58
Query: 962 EDIHECKICHKTFLEKGSLAKHMNWVHGDKCHICKVCGAKIKGNLQKHMLSHTGEK 1017
+ + L + + GE+
Sbjct: 59 ---ILEDKVEELLSKNYHLENEV-----------------------ARLKKLVGER 88
Score = 61.0 bits (149), Expect = 2e-11
Identities = 22/93 (23%), Positives = 33/93 (35%), Gaps = 13/93 (13%)
Query: 596 IKRYMCDICGKQFTTLSYLDLHRKSH-NETVKRKEEDKKYECDSCNKKFWSKRALSEHMI 654
+K + C IC + F+ +L H ++H E K + CD C +KF H
Sbjct: 1 MKPFQCRICMRNFSRSDHLTTHIRTHTGE--------KPFACDICGRKFARSDERKRHRD 52
Query: 655 IHTGIKEHQCHVCNTAF---YHIRSLSRHLKIH 684
I I YH+ + LK
Sbjct: 53 IQH-ILPILEDKVEELLSKNYHLENEVARLKKL 84
Score = 58.7 bits (143), Expect = 1e-10
Identities = 20/93 (21%), Positives = 32/93 (34%), Gaps = 12/93 (12%)
Query: 571 QCPICEKIFAAPKQMRMHLRHVHSSIKRYMCDICGKQFTTLSYLDLHRKSHNETVKRKEE 630
QC IC + F+ + H+R H+ K + CDICG++F HR +
Sbjct: 5 QCRICMRNFSRSDHLTTHIR-THTGEKPFACDICGRKFARSDERKRHRDIQHI------- 56
Query: 631 DKKYECDSCNKKFWSKRALSEHMI---IHTGIK 660
D + L + G +
Sbjct: 57 -LPILEDKVEELLSKNYHLENEVARLKKLVGER 88
Score = 57.5 bits (140), Expect = 3e-10
Identities = 17/89 (19%), Positives = 35/89 (39%), Gaps = 11/89 (12%)
Query: 1475 KKYACDVCGKQFTSTNRVSQHKAHSHFGIIKTIQRKFECDFCKKKFYRNFDLQEHINTHT 1534
K + C +C + F+ ++ ++ H T ++ F CD C +KF R+ + + H +
Sbjct: 2 KPFQCRICMRNFSRSDHLTTHI------RTHTGEKPFACDICGRKFARSDERKRHRDIQH 55
Query: 1535 GNKPYQCQICNKSFGTRRNYRLHLKRHKR 1563
P + + HL+
Sbjct: 56 I-LPILEDKVEELL----SKNYHLENEVA 79
Score = 54.4 bits (132), Expect = 4e-09
Identities = 17/89 (19%), Positives = 30/89 (33%), Gaps = 11/89 (12%)
Query: 866 KKYVCDMCGKQFTSNNRVSQHKAYSHFGIIKTIERKFECDYCKMKFKSKSFLSEHINTHT 925
K + C +C + F+ ++ ++ H T E+ F CD C KF H +
Sbjct: 2 KPFQCRICMRNFSRSDHLTTHI------RTHTGEKPFACDICGRKFARSDERKRHRDIQH 55
Query: 926 GNKPYQCQICKKSFANKRSYQRDLKRHKQ 954
P ++ S L+
Sbjct: 56 I-LPILEDKVEELL----SKNYHLENEVA 79
Score = 49.4 bits (119), Expect = 2e-07
Identities = 20/86 (23%), Positives = 33/86 (38%), Gaps = 9/86 (10%)
Query: 1324 KRYLCDICGKQFTSTNRVNIHKACVHSSTGNK-FECIYCKKKYRRKFDLKEHINKHTGNK 1382
K + C IC + F+ ++ + H H TG K F C C +K+ R + K H +
Sbjct: 2 KPFQCRICMRNFSRSDHLTTHIR-TH--TGEKPFACDICGRKFARSDERKRHRDIQHI-L 57
Query: 1383 PYHCQICKESFYTLKTYRGDLKRHEQ 1408
P +E + L+
Sbjct: 58 PILEDKVEELL----SKNYHLENEVA 79
Score = 48.3 bits (116), Expect = 6e-07
Identities = 18/87 (20%), Positives = 38/87 (43%), Gaps = 7/87 (8%)
Query: 1299 CPVCHKTYSTPKTMRRHLRQVHTSQKRYLCDICGKQFTSTNRVNIHKACVHSSTGNKFEC 1358
C +C + +S + H+R HT +K + CDICG++F ++ H+ +
Sbjct: 6 CRICMRNFSRSDHLTTHIR-THTGEKPFACDICGRKFARSDERKRHRD-IQ--HILPILE 61
Query: 1359 IYCKKKYRRKFDLKEHIN---KHTGNK 1382
++ + + L+ + K G +
Sbjct: 62 DKVEELLSKNYHLENEVARLKKLVGER 88
Score = 47.1 bits (113), Expect = 1e-06
Identities = 17/91 (18%), Positives = 36/91 (39%), Gaps = 11/91 (12%)
Query: 841 CPVCHKTYSTPKSMRKHLREVHSSQKKYVCDMCGKQFTSNNRVSQHKAYSHFGIIKTIER 900
C +C + +S + H+R H+ +K + CD+CG++F ++ +H+ I+
Sbjct: 6 CRICMRNFSRSDHLTTHIR-THTGEKPFACDICGRKFARSDERKRHR------DIQH-IL 57
Query: 901 KFECDYCKMKFKSKSFLSEHIN---THTGNK 928
D + L + G +
Sbjct: 58 PILEDKVEELLSKNYHLENEVARLKKLVGER 88
Score = 44.8 bits (107), Expect = 9e-06
Identities = 18/70 (25%), Positives = 26/70 (37%), Gaps = 20/70 (28%)
Query: 1537 KPYQCQICNKSFGTRRNYRLHLKRHKRSAGQLKPEDIH------ECKICHKIFLENSRLT 1590
KP+QC+IC ++F + HL H R H C IC + F +
Sbjct: 2 KPFQCRICMRNF----SRSDHLTTHIR---------THTGEKPFACDICGRKFARSDERK 48
Query: 1591 RHMNFTHGDK 1600
RH +
Sbjct: 49 RHRD-IQHIL 57
Score = 44.8 bits (107), Expect = 1e-05
Identities = 22/93 (23%), Positives = 36/93 (38%), Gaps = 20/93 (21%)
Query: 370 QCPLCTKIFTTAKHMRVHLRSVHNGKERKFICDICGKQFTSNIHASRH------KNYAHS 423
QC +C + F+ + H+ H+R H G E+ F CDICG++F + RH
Sbjct: 5 QCRICMRNFSRSDHLTTHIR-THTG-EKPFACDICGRKFARSDERKRHRDIQHILPI--- 59
Query: 424 RDRQKMECDYCKRKFTCKRYLAEHINA---HTG 453
D + + +L + G
Sbjct: 60 ------LEDKVEELLSKNYHLENEVARLKKLVG 86
Score = 44.8 bits (107), Expect = 1e-05
Identities = 22/107 (20%), Positives = 33/107 (30%), Gaps = 36/107 (33%)
Query: 1889 CPICKKGFIALKHMKTHLKKHMWKAGEIPLEDTYLCDLCSKVFLEHKDMIRHREWVHGDK 1948
C IC + F H+ TH++ H GE P + CD+C + F
Sbjct: 6 CRICMRNFSRSDHLTTHIRTH---TGEKP----FACDICGRKFAR--------------- 43
Query: 1949 CHVCKVCGAKIKGNMKRHMLSHTGEKPFCCDICGK--SLKGNLKAHI 1993
KRH P D + S +L+ +
Sbjct: 44 -----------SDERKRHRDIQH-ILPILEDKVEELLSKNYHLENEV 78
Score = 37.1 bits (87), Expect = 0.006
Identities = 5/49 (10%), Positives = 14/49 (28%), Gaps = 1/49 (2%)
Query: 1450 KCPVCHKTYSTPRQMRIHLREAHSQKKYACDVCGKQFTSTNRVSQHKAH 1498
C +C + ++ + + H D + + + A
Sbjct: 33 ACDICGRKFARSDERKRHRD-IQHILPILEDKVEELLSKNYHLENEVAR 80
Score = 36.7 bits (86), Expect = 0.007
Identities = 21/119 (17%), Positives = 34/119 (28%), Gaps = 39/119 (32%)
Query: 690 KMYKCPVCSKMFTELYEMKRHRDHKHGGKCHVCKICGATIKLFTELEEKEDSSFERKKSK 749
K ++C +C + F+ + H H G EK
Sbjct: 2 KPFQCRICMRNFSRSDHLTTHI-RTHTG-------------------EK----------- 30
Query: 750 DSFHCDTCGKYFRSRQICNKHIKRVHLNPT-KTFKCDLCSDRFSTSAKLKKHVD--KIH 805
F CD CG+ F +H + + D + S + L+ V K
Sbjct: 31 -PFACDICGRKFARSDERKRH-RDIQ---HILPILEDKVEELLSKNYHLENEVARLKKL 84
Score = 36.7 bits (86), Expect = 0.008
Identities = 16/85 (18%), Positives = 25/85 (29%), Gaps = 17/85 (20%)
Query: 399 FICDICGKQFTSNIHASRH-------KNYAHSRDRQKMECDYCKRKFTCKRYLAEHINAH 451
F C IC + F+ + H + H K + CD C RKF H +
Sbjct: 4 FQCRICMRNFSRSDHLTTHIRTHTGEKPF---------ACDICGRKFARSDERKRHRDIQ 54
Query: 452 TGNTIYGCRICKKTFLYTNGLRRHI 476
++ L +
Sbjct: 55 HILP-ILEDKVEELLSKNYHLENEV 78
Score = 35.5 bits (83), Expect = 0.017
Identities = 18/112 (16%), Positives = 35/112 (31%), Gaps = 35/112 (31%)
Query: 780 KTFKCDLCSDRFSTSAKLKKHVDKIHFTPEFQEPSKKNEPLDTGD--YTLEQWNELVTAQ 837
K F+C +C FS S L H+ + H TG+ +
Sbjct: 2 KPFQCRICMRNFSRSDHLTTHI-RTH----------------TGEKPFA----------- 33
Query: 838 SKDCPVCHKTYSTPKSMRKHLREVHSSQKKYVCDMCGKQFTSNNRVSQHKAY 889
C +C + ++ ++H + + D + + N + A
Sbjct: 34 ---CDICGRKFARSDERKRHRD-IQ-HILPILEDKVEELLSKNYHLENEVAR 80
Score = 35.5 bits (83), Expect = 0.020
Identities = 23/88 (26%), Positives = 34/88 (38%), Gaps = 8/88 (9%)
Query: 1823 KKFKCDLCQKQFKASRSLQCHKQFVHLGVHKPKFLNMECDYCSRKFPSKNEVTNHIKSHM 1882
K F+C +C + F S L H + H G KP CD C RKF +E H
Sbjct: 2 KPFQCRICMRNFSRSDHLTTHIR-THTG-EKP----FACDICGRKFARSDERKRHRDIQ- 54
Query: 1883 GVRDILCPICKKGFIALKHMKTHLKKHM 1910
+ IL ++ H++ +
Sbjct: 55 HILPILEDKVEELLSKNYHLENE-VARL 81
Score = 32.9 bits (76), Expect = 0.15
Identities = 16/84 (19%), Positives = 32/84 (38%), Gaps = 12/84 (14%)
Query: 1798 CPVCNKEYATPVTMRKHLREVHVSKKKFKCDLCQKQFKASRSLQCHKQFVHLGVH--KPK 1855
C +C + ++ + H+R H +K F CD+C ++F S + H+ + P
Sbjct: 6 CRICMRNFSRSDHLTTHIR-THTGEKPFACDICGRKFARSDERKRHRD-----IQHILP- 58
Query: 1856 FLNMECDYCSRKFPSKNEVTNHIK 1879
+ D + N +
Sbjct: 59 ---ILEDKVEELLSKNYHLENEVA 79
Score = 31.3 bits (72), Expect = 0.48
Identities = 7/55 (12%), Positives = 18/55 (32%), Gaps = 4/55 (7%)
Query: 1798 CPVCNKEYATPVTMRKHLREVHVSKKKFKCDLCQKQFKASRSLQCHKQFVHLGVH 1852
C +C +++A ++H + D ++ + L+ L
Sbjct: 34 CDICGRKFARSDERKRHRD-IQ-HILPILEDKVEELLSKNYHLENEVA--RLKKL 84
Score = 30.5 bits (70), Expect = 1.0
Identities = 19/83 (22%), Positives = 30/83 (36%), Gaps = 10/83 (12%)
Query: 104 TCRICTEVFENLTLLRRHMRVKHPGEQNLPCRLCDMSFSNKYQKKKHYSAFHKGMPFIPS 163
CRIC F L H+R H GE+ C +C F+ ++K+H +P
Sbjct: 5 QCRICMRNFSRSDHLTTHIRT-HTGEKPFACDICGRKFARSDERKRHRDI-QHILP---- 58
Query: 164 FTCPICQKIFKNKEWYLDHLSLH 186
+++ HL
Sbjct: 59 ILEDKVEELLS----KNYHLENE 77
Score = 29.4 bits (67), Expect = 2.6
Identities = 20/86 (23%), Positives = 25/86 (29%), Gaps = 14/86 (16%)
Query: 256 FTCDTCDKPFDTIEKCRRHAIRMHMNPCKMFKCDICVASFLTPHKLKTHIKTKHRTQLKE 315
F C C + F + H IR H K F CDIC F + K H
Sbjct: 4 FQCRICMRNFSRSDHLTTH-IRTHTGE-KPFACDICGRKFARSDERKRHRDI-Q------ 54
Query: 316 LYT---FECQHCEDKFSTPFELNKHN 338
E+ S + L
Sbjct: 55 --HILPILEDKVEELLSKNYHLENEV 78
>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding,
transcription, metal-binding, DNA, protein, nucleus,
activator; 1.70A {Mus musculus} PDB: 2wbu_A
Length = 89
Score = 80.3 bits (199), Expect = 3e-18
Identities = 32/88 (36%), Positives = 42/88 (47%), Gaps = 5/88 (5%)
Query: 1013 HTGEKPFCCHICGKSL--KGNLKDHILKCHTGERPYKCDV--CGSSFKDKWYLGVHMRKH 1068
T CGK+ +LK H L+ HTGE+PY CD CG F L H RKH
Sbjct: 2 RTATHTCDYAGCGKTYTKSSHLKAH-LRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKH 60
Query: 1069 NGEKPYNCDYCGQTFAARSTFTFHLKKH 1096
G +P+ C C + F+ H+K+H
Sbjct: 61 TGHRPFQCQKCDRAFSRSDHLALHMKRH 88
Score = 63.3 bits (155), Expect = 3e-12
Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 8/90 (8%)
Query: 1474 QKKYACDVCGKQFTSTNRVSQHKAHSHFGIIKTIQRKFECD--FCKKKFYRNFDLQEHIN 1531
CGK +T + S KAH T ++ + CD C KF R+ +L H
Sbjct: 5 THTCDYAGCGKTYT---KSSHLKAHLR---THTGEKPYHCDWDGCGWKFARSDELTRHYR 58
Query: 1532 THTGNKPYQCQICNKSFGTRRNYRLHLKRH 1561
HTG++P+QCQ C+++F + LH+KRH
Sbjct: 59 KHTGHRPFQCQKCDRAFSRSDHLALHMKRH 88
Score = 61.4 bits (150), Expect = 2e-11
Identities = 29/87 (33%), Positives = 41/87 (47%), Gaps = 9/87 (10%)
Query: 989 GDKCHICKVCGAKI---KGNLQKHMLSHTGEKPFCCHI--CGKSL--KGNLKDHILKCHT 1041
CG K +L+ H+ +HTGEKP+ C CG L H K HT
Sbjct: 4 ATHTCDYAGCG-KTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRK-HT 61
Query: 1042 GERPYKCDVCGSSFKDKWYLGVHMRKH 1068
G RP++C C +F +L +HM++H
Sbjct: 62 GHRPFQCQKCDRAFSRSDHLALHMKRH 88
Score = 60.2 bits (147), Expect = 3e-11
Identities = 29/94 (30%), Positives = 41/94 (43%), Gaps = 9/94 (9%)
Query: 593 HSSIKRYMCDICGKQFTTLSYLDLHRKSHNETVKRKEEDKKYECD--SCNKKFWSKRALS 650
++ CGK +T S+L H ++H +K Y CD C KF L+
Sbjct: 2 RTATHTCDYAGCGKTYTKSSHLKAHLRTHTG-------EKPYHCDWDGCGWKFARSDELT 54
Query: 651 EHMIIHTGIKEHQCHVCNTAFYHIRSLSRHLKIH 684
H HTG + QC C+ AF L+ H+K H
Sbjct: 55 RHYRKHTGHRPFQCQKCDRAFSRSDHLALHMKRH 88
Score = 59.1 bits (144), Expect = 1e-10
Identities = 27/91 (29%), Positives = 40/91 (43%), Gaps = 9/91 (9%)
Query: 1505 KTIQRKFECDFCKKKFYRNFDLQEHINTHTGNKPYQCQI--CNKSFGTRRNYRLHLKRHK 1562
+T + C K + ++ L+ H+ THTG KPY C C F R + L RH
Sbjct: 2 RTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKF-ARSD---ELTRHY 57
Query: 1563 RSAGQLKPEDIHECKICHKIFLENSRLTRHM 1593
R +P +C+ C + F + L HM
Sbjct: 58 RKHTGHRP---FQCQKCDRAFSRSDHLALHM 85
Score = 55.6 bits (135), Expect = 2e-09
Identities = 26/86 (30%), Positives = 39/86 (45%), Gaps = 8/86 (9%)
Query: 1946 GDKCHVCKVCGAKI---KGNMKRHMLSHTGEKPFCCDI--CGKSL--KGNLKAHILRCQG 1998
CG K ++K H+ +HTGEKP+ CD CG L H + G
Sbjct: 4 ATHTCDYAGCG-KTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTG 62
Query: 1999 ERPYKCDVCGSSFKDKKHFSVHIRNH 2024
RP++C C +F H ++H++ H
Sbjct: 63 HRPFQCQKCDRAFSRSDHLALHMKRH 88
Score = 55.6 bits (135), Expect = 2e-09
Identities = 29/91 (31%), Positives = 39/91 (42%), Gaps = 9/91 (9%)
Query: 896 KTIERKFECDYCKMKFKSKSFLSEHINTHTGNKPYQCQI--CKKSFANKRSYQRDLKRHK 953
+T + C + S L H+ THTG KPY C C FA RS + L RH
Sbjct: 2 RTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFA--RSDE--LTRHY 57
Query: 954 QLAGQLKPEDIHECKICHKTFLEKGSLAKHM 984
+ +P +C+ C + F LA HM
Sbjct: 58 RKHTGHRP---FQCQKCDRAFSRSDHLALHM 85
Score = 54.1 bits (131), Expect = 6e-09
Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 8/93 (8%)
Query: 862 HSSQKKYVCDMCGKQFTSNNRVSQHKAYSHFGIIKTIERKFECDY--CKMKFKSKSFLSE 919
++ CGK +T ++ + H +H G E+ + CD+ C KF L+
Sbjct: 2 RTATHTCDYAGCGKTYTKSSHLKAHLR-THTG-----EKPYHCDWDGCGWKFARSDELTR 55
Query: 920 HINTHTGNKPYQCQICKKSFANKRSYQRDLKRH 952
H HTG++P+QCQ C ++F+ +KRH
Sbjct: 56 HYRKHTGHRPFQCQKCDRAFSRSDHLALHMKRH 88
Score = 52.1 bits (126), Expect = 2e-08
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 6/77 (7%)
Query: 1320 HTSQKRYLCDICGKQFTSTNRVNIHKACVHSSTGNK-FEC--IYCKKKYRRKFDLKEHIN 1376
T+ CGK +T ++ + H H TG K + C C K+ R +L H
Sbjct: 2 RTATHTCDYAGCGKTYTKSSHLKAHLR-TH--TGEKPYHCDWDGCGWKFARSDELTRHYR 58
Query: 1377 KHTGNKPYHCQICKESF 1393
KHTG++P+ CQ C +F
Sbjct: 59 KHTGHRPFQCQKCDRAF 75
Score = 48.7 bits (117), Expect = 4e-07
Identities = 27/87 (31%), Positives = 41/87 (47%), Gaps = 9/87 (10%)
Query: 840 DCPVCHKTYSTPKSMRKHLREVHSSQKKYVCDM--CGKQFTSNNRVSQHKAYSHFGIIKT 897
D C KTY+ ++ HLR H+ +K Y CD CG +F ++ +++H H G
Sbjct: 9 DYAGCGKTYTKSSHLKAHLR-THTGEKPYHCDWDGCGWKFARSDELTRHYR-KHTG---- 62
Query: 898 IERKFECDYCKMKFKSKSFLSEHINTH 924
R F+C C F L+ H+ H
Sbjct: 63 -HRPFQCQKCDRAFSRSDHLALHMKRH 88
Score = 48.7 bits (117), Expect = 4e-07
Identities = 23/88 (26%), Positives = 35/88 (39%), Gaps = 10/88 (11%)
Query: 571 QCPICEKIFAAPKQMRMHLRHVHSSIKRYMCDI--CGKQFTTLSYLDLHRKSHNETVKRK 628
C K + ++ HLR H+ K Y CD CG +F L H + H
Sbjct: 9 DYAGCGKTYTKSSHLKAHLR-THTGEKPYHCDWDGCGWKFARSDELTRHYRKHT------ 61
Query: 629 EEDKKYECDSCNKKFWSKRALSEHMIIH 656
+ ++C C++ F L+ HM H
Sbjct: 62 -GHRPFQCQKCDRAFSRSDHLALHMKRH 88
Score = 47.9 bits (115), Expect = 8e-07
Identities = 27/84 (32%), Positives = 41/84 (48%), Gaps = 6/84 (7%)
Query: 370 QCPLCTKIFTTAKHMRVHLRSVHNGKERKFICDI--CGKQFTSNIHASRHKNYAHSRDRQ 427
C K +T + H++ HLR H G E+ + CD CG +F + +RH H+ R
Sbjct: 9 DYAGCGKTYTKSSHLKAHLR-THTG-EKPYHCDWDGCGWKFARSDELTRHYR-KHTGHR- 64
Query: 428 KMECDYCKRKFTCKRYLAEHINAH 451
+C C R F+ +LA H+ H
Sbjct: 65 PFQCQKCDRAFSRSDHLALHMKRH 88
Score = 47.9 bits (115), Expect = 8e-07
Identities = 18/80 (22%), Positives = 31/80 (38%), Gaps = 8/80 (10%)
Query: 627 RKEEDKKYECDSCNKKFWSKRALSEHMIIHTGIKEHQCHV--CNTAFYHIRSLSRHLKIH 684
++ + C K + L H+ HTG K + C C F L+RH + H
Sbjct: 1 KRTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKH 60
Query: 685 --EYNESKMYKCPVCSKMFT 702
+ ++C C + F+
Sbjct: 61 TGH----RPFQCQKCDRAFS 76
Score = 43.7 bits (104), Expect = 2e-05
Identities = 27/94 (28%), Positives = 39/94 (41%), Gaps = 8/94 (8%)
Query: 1819 HVSKKKFKCDLCQKQFKASRSLQCHKQFVHLGVHKPKFLNMECDY--CSRKFPSKNEVTN 1876
+ C K + S L+ H + H G KP CD+ C KF +E+T
Sbjct: 2 RTATHTCDYAGCGKTYTKSSHLKAHLR-THTG-EKP----YHCDWDGCGWKFARSDELTR 55
Query: 1877 HIKSHMGVRDILCPICKKGFIALKHMKTHLKKHM 1910
H + H G R C C + F H+ H+K+H
Sbjct: 56 HYRKHTGHRPFQCQKCDRAFSRSDHLALHMKRHF 89
Score = 43.3 bits (103), Expect = 3e-05
Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 7/84 (8%)
Query: 1298 DCPVCHKTYSTPKTMRRHLRQVHTSQKRYLCDI--CGKQFTSTNRVNIHKACVHSSTGNK 1355
D C KTY+ ++ HLR HT +K Y CD CG +F ++ + H TG++
Sbjct: 9 DYAGCGKTYTKSSHLKAHLR-THTGEKPYHCDWDGCGWKFARSDELTRHY---RKHTGHR 64
Query: 1356 -FECIYCKKKYRRKFDLKEHINKH 1378
F+C C + + R L H+ +H
Sbjct: 65 PFQCQKCDRAFSRSDHLALHMKRH 88
Score = 42.9 bits (102), Expect = 5e-05
Identities = 18/67 (26%), Positives = 27/67 (40%), Gaps = 4/67 (5%)
Query: 1922 YLCDLCSKVFLEHKDMIRHREWVHGDKCHVCKV--CGAKI--KGNMKRHMLSHTGEKPFC 1977
C K + + + H G+K + C CG K + RH HTG +PF
Sbjct: 8 CDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQ 67
Query: 1978 CDICGKS 1984
C C ++
Sbjct: 68 CQKCDRA 74
Score = 39.4 bits (93), Expect = 7e-04
Identities = 26/87 (29%), Positives = 37/87 (42%), Gaps = 9/87 (10%)
Query: 1798 CPVCNKEYATPVTMRKHLREVHVSKKKFKCDL--CQKQFKASRSLQCHKQFVHLGVHKPK 1855
C K Y ++ HLR H +K + CD C +F S L H + H G H+P
Sbjct: 10 YAGCGKTYTKSSHLKAHLR-THTGEKPYHCDWDGCGWKFARSDELTRHYR-KHTG-HRP- 65
Query: 1856 FLNMECDYCSRKFPSKNEVTNHIKSHM 1882
+C C R F + + H+K H
Sbjct: 66 ---FQCQKCDRAFSRSDHLALHMKRHF 89
Score = 36.0 bits (84), Expect = 0.012
Identities = 20/76 (26%), Positives = 25/76 (32%), Gaps = 10/76 (13%)
Query: 656 HTGIKEHQCHVCNTAFYHIRSLSRHLKIH--EYNESKMYKC--PVCSKMFTELYEMKRHR 711
T C + L HL+ H E K Y C C F E+ RH
Sbjct: 2 RTATHTCDYAGCGKTYTKSSHLKAHLRTHTGE----KPYHCDWDGCGWKFARSDELTRHY 57
Query: 712 DHKH-GGKCHVCKICG 726
KH G + C+ C
Sbjct: 58 -RKHTGHRPFQCQKCD 72
Score = 36.0 bits (84), Expect = 0.013
Identities = 22/83 (26%), Positives = 34/83 (40%), Gaps = 4/83 (4%)
Query: 395 KERKFICDICGKQFTSNIHASRHKNYAHSRDRQKMECDY--CKRKFTCKRYLAEHINAHT 452
CGK +T + H H H+ ++ CD+ C KF L H HT
Sbjct: 4 ATHTCDYAGCGKTYTKSSHLKAHLR-THTGEK-PYHCDWDGCGWKFARSDELTRHYRKHT 61
Query: 453 GNTIYGCRICKKTFLYTNGLRRH 475
G+ + C+ C + F ++ L H
Sbjct: 62 GHRPFQCQKCDRAFSRSDHLALH 84
Score = 31.7 bits (73), Expect = 0.35
Identities = 8/30 (26%), Positives = 12/30 (40%)
Query: 1067 KHNGEKPYNCDYCGQTFAARSTFTFHLKKH 1096
K + CG+T+ S HL+ H
Sbjct: 1 KRTATHTCDYAGCGKTYTKSSHLKAHLRTH 30
Score = 31.3 bits (72), Expect = 0.62
Identities = 20/57 (35%), Positives = 25/57 (43%), Gaps = 5/57 (8%)
Query: 752 FHCD--TCGKYFRSRQICNKHIKRVHLNPTKTFKCDLCSDRFSTSAKLKKHVDKIHF 806
+HCD CG F +H R H + F+C C FS S L H+ K HF
Sbjct: 36 YHCDWDGCGWKFARSDELTRH-YRKHTG-HRPFQCQKCDRAFSRSDHLALHM-KRHF 89
Score = 28.3 bits (64), Expect = 6.9
Identities = 13/33 (39%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
Query: 118 LRRHMRVKHPGEQNLPCRLCDMSFSNKYQKKKH 150
L RH R KH G + C+ CD +FS H
Sbjct: 53 LTRHYR-KHTGHRPFQCQKCDRAFSRSDHLALH 84
>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain
containing protein 16, structural genomics, NPPSFA; NMR
{Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Length = 77
Score = 79.8 bits (198), Expect = 4e-18
Identities = 26/74 (35%), Positives = 36/74 (48%), Gaps = 3/74 (4%)
Query: 1003 KGNLQKHMLSHTGEKPFCCHICGK--SLKGNLKDHILKCHTGERPYKCDVCGSSFKDKWY 1060
G+ + + + C CGK S +L H + HTGE+PYKCD CG +F + +
Sbjct: 3 SGSSGRSEWQQRERRRYKCDECGKSFSHSSDLSKH-RRTHTGEKPYKCDECGKAFIQRSH 61
Query: 1061 LGVHMRKHNGEKPY 1074
L H R H G P
Sbjct: 62 LIGHHRVHTGSGPS 75
Score = 72.9 bits (180), Expect = 1e-15
Identities = 27/57 (47%), Positives = 29/57 (50%)
Query: 1040 HTGERPYKCDVCGSSFKDKWYLGVHMRKHNGEKPYNCDYCGQTFAARSTFTFHLKKH 1096
R YKCD CG SF L H R H GEKPY CD CG+ F RS H + H
Sbjct: 13 QRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVH 69
Score = 59.0 bits (144), Expect = 7e-11
Identities = 25/74 (33%), Positives = 33/74 (44%), Gaps = 11/74 (14%)
Query: 1960 KGNMKRHMLSHTGEKPFCCDICGK--SLKGNLKAHILRCQ----GERPYKCDVCGSSFKD 2013
G+ R + + CD CGK S +L H + GE+PYKCD CG +F
Sbjct: 3 SGSSGRSEWQQRERRRYKCDECGKSFSHSSDLSKH----RRTHTGEKPYKCDECGKAFIQ 58
Query: 2014 KKHFSVHIRNH-GE 2026
+ H H R H G
Sbjct: 59 RSHLIGHHRVHTGS 72
Score = 52.1 bits (126), Expect = 2e-08
Identities = 25/76 (32%), Positives = 34/76 (44%), Gaps = 7/76 (9%)
Query: 977 KGSLAKHMNWVH-GDKCHICKVCGA--KIKGNLQKHMLSHTGEKPFCCHICGK--SLKGN 1031
GS + W + + C CG +L KH +HTGEKP+ C CGK + +
Sbjct: 3 SGSSGRSE-WQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSH 61
Query: 1032 LKDHILKCHTGERPYK 1047
L H + HTG P
Sbjct: 62 LIGH-HRVHTGSGPSS 76
Score = 51.3 bits (124), Expect = 4e-08
Identities = 24/53 (45%), Positives = 30/53 (56%), Gaps = 4/53 (7%)
Query: 1511 FECDFCKKKFYRNFDLQEHINTHTGNKPYQCQICNKSFGTRRNYRLHLKRHKR 1563
++CD C K F + DL +H THTG KPY+C C K+F R HL H R
Sbjct: 19 YKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAF----IQRSHLIGHHR 67
Score = 50.5 bits (122), Expect = 8e-08
Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 7/78 (8%)
Query: 853 SMRKHLREVHSSQKKYVCDMCGKQFTSNNRVSQHKAYSHFGIIKTIERKFECDYCKMKFK 912
S + +++Y CD CGK F+ ++ +S+H+ T E+ ++CD C F
Sbjct: 5 SSGRSEW-QQRERRRYKCDECGKSFSHSSDLSKHR------RTHTGEKPYKCDECGKAFI 57
Query: 913 SKSFLSEHINTHTGNKPY 930
+S L H HTG+ P
Sbjct: 58 QRSHLIGHHRVHTGSGPS 75
Score = 50.1 bits (121), Expect = 1e-07
Identities = 18/68 (26%), Positives = 29/68 (42%), Gaps = 7/68 (10%)
Query: 1525 DLQEHINTHTGNKPYQCQICNKSFGTRRNYRLHLKRHKRSAGQLKPEDIHECKICHKIFL 1584
+ Y+C C KSF ++ L +H+R+ KP ++C C K F+
Sbjct: 5 SSGRSEWQQRERRRYKCDECGKSF----SHSSDLSKHRRTHTGEKP---YKCDECGKAFI 57
Query: 1585 ENSRLTRH 1592
+ S L H
Sbjct: 58 QRSHLIGH 65
Score = 49.0 bits (118), Expect = 3e-07
Identities = 21/73 (28%), Positives = 29/73 (39%), Gaps = 7/73 (9%)
Query: 612 SYLDLHRKSHNETVKRKEEDKKYECDSCNKKFWSKRALSEHMIIHTGIKEHQCHVCNTAF 671
E ++Y+CD C K F LS+H HTG K ++C C AF
Sbjct: 4 GSSGRSEWQQRE-------RRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAF 56
Query: 672 YHIRSLSRHLKIH 684
L H ++H
Sbjct: 57 IQRSHLIGHHRVH 69
Score = 47.8 bits (115), Expect = 6e-07
Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 10/75 (13%)
Query: 1465 RIHLREAHSQKKYACDVCGKQFTSTNRVSQHKAHSHFGIIKTIQRKFECDFCKKKFYRNF 1524
++Y CD CGK F+ ++ +S+H+ T ++ ++CD C K F +
Sbjct: 11 WQQRER----RRYKCDECGKSFSHSSDLSKHR------RTHTGEKPYKCDECGKAFIQRS 60
Query: 1525 DLQEHINTHTGNKPY 1539
L H HTG+ P
Sbjct: 61 HLIGHHRVHTGSGPS 75
Score = 47.4 bits (114), Expect = 8e-07
Identities = 25/73 (34%), Positives = 33/73 (45%), Gaps = 8/73 (10%)
Query: 588 HLRHVHSSIKRYMCDICGKQFTTLSYLDLHRKSHNETVKRKEEDKKYECDSCNKKFWSKR 647
+RY CD CGK F+ S L HR++H +K Y+CD C K F +
Sbjct: 9 SEW-QQRERRRYKCDECGKSFSHSSDLSKHRRTHTG-------EKPYKCDECGKAFIQRS 60
Query: 648 ALSEHMIIHTGIK 660
L H +HTG
Sbjct: 61 HLIGHHRVHTGSG 73
Score = 47.1 bits (113), Expect = 1e-06
Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 5/75 (6%)
Query: 1311 TMRRHLRQVHTSQKRYLCDICGKQFTSTNRVNIHKACVHSSTGNK-FECIYCKKKYRRKF 1369
+ R ++RY CD CGK F+ ++ ++ H+ H TG K ++C C K + ++
Sbjct: 5 SSGRSEW-QQRERRRYKCDECGKSFSHSSDLSKHRR-TH--TGEKPYKCDECGKAFIQRS 60
Query: 1370 DLKEHINKHTGNKPY 1384
L H HTG+ P
Sbjct: 61 HLIGHHRVHTGSGPS 75
Score = 47.1 bits (113), Expect = 1e-06
Identities = 23/107 (21%), Positives = 35/107 (32%), Gaps = 33/107 (30%)
Query: 913 SKSFLSEHINTHTGNKPYQCQICKKSFANKRSYQRDLKRHKQLAGQLKPEDIHECKICHK 972
S + Y+C C KSF S+ DL +H++ KP ++C C K
Sbjct: 2 SSGSSGRSEWQQRERRRYKCDECGKSF----SHSSDLSKHRRTHTGEKP---YKCDECGK 54
Query: 973 TFLEKGSLAKHMNWVHGDKCHICKVCGAKIKGNLQKHMLSHTGEKPF 1019
F+++ L H + HTG P
Sbjct: 55 AFIQRSHLIGH-----------------------HR---VHTGSGPS 75
Score = 47.1 bits (113), Expect = 1e-06
Identities = 24/59 (40%), Positives = 33/59 (55%), Gaps = 4/59 (6%)
Query: 895 IKTIERKFECDYCKMKFKSKSFLSEHINTHTGNKPYQCQICKKSFANKRSYQRDLKRHK 953
+ R+++CD C F S LS+H THTG KPY+C C K+F +RS+ L H
Sbjct: 12 QQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAF-IQRSH---LIGHH 66
Score = 43.6 bits (104), Expect = 2e-05
Identities = 10/36 (27%), Positives = 17/36 (47%)
Query: 1061 LGVHMRKHNGEKPYNCDYCGQTFAARSTFTFHLKKH 1096
G + + Y CD CG++F+ S + H + H
Sbjct: 6 SGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTH 41
Score = 34.0 bits (79), Expect = 0.050
Identities = 22/79 (27%), Positives = 31/79 (39%), Gaps = 11/79 (13%)
Query: 1903 KTHLKKHMWK-AGEIPLEDTYLCDLCSKVFLEHKDMIRHREWVH-GDKCHVCKVCGAKI- 1959
+ W+ Y CD C K F D+ +HR H G+K + C CG K
Sbjct: 3 SGSSGRSEWQQRERRR----YKCDECGKSFSHSSDLSKHRR-THTGEKPYKCDECG-KAF 56
Query: 1960 --KGNMKRHMLSHTGEKPF 1976
+ ++ H HTG P
Sbjct: 57 IQRSHLIGHHRVHTGSGPS 75
Score = 33.2 bits (77), Expect = 0.085
Identities = 16/46 (34%), Positives = 23/46 (50%)
Query: 430 ECDYCKRKFTCKRYLAEHINAHTGNTIYGCRICKKTFLYTNGLRRH 475
+CD C + F+ L++H HTG Y C C K F+ + L H
Sbjct: 20 KCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGH 65
Score = 32.4 bits (75), Expect = 0.17
Identities = 20/78 (25%), Positives = 29/78 (37%), Gaps = 18/78 (23%)
Query: 383 HMRVHLRSVHNGKERKFICDICGKQFTSNIHASRH-------KNYAHSRDRQKMECDYCK 435
R++ CD CGK F+ + S+H K Y +CD C
Sbjct: 5 SSGRSEW-QQRE-RRRYKCDECGKSFSHSSDLSKHRRTHTGEKPY---------KCDECG 53
Query: 436 RKFTCKRYLAEHINAHTG 453
+ F + +L H HTG
Sbjct: 54 KAFIQRSHLIGHHRVHTG 71
Score = 29.3 bits (67), Expect = 2.2
Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 7/56 (12%)
Query: 752 FHCDTCGKYFRSRQICNKHIKRVHLNPT--KTFKCDLCSDRFSTSAKLKKHVDKIH 805
+ CD CGK F +KH +R H T K +KCD C F + L H ++H
Sbjct: 19 YKCDECGKSFSHSSDLSKH-RRTH---TGEKPYKCDECGKAFIQRSHLIGH-HRVH 69
Score = 28.9 bits (66), Expect = 2.8
Identities = 20/74 (27%), Positives = 33/74 (44%), Gaps = 7/74 (9%)
Query: 1810 TMRKHLREVHVSKKKFKCDLCQKQFKASRSLQCHKQFVHLGVHKPKFLNMECDYCSRKFP 1869
+ + ++++KCD C K F S L H + H G KP +CD C + F
Sbjct: 5 SSGRSEW-QQRERRRYKCDECGKSFSHSSDLSKH-RRTHTG-EKP----YKCDECGKAFI 57
Query: 1870 SKNEVTNHIKSHMG 1883
++ + H + H G
Sbjct: 58 QRSHLIGHHRVHTG 71
>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain,
protein-DNA complex, DNA-B metal-binding, nucleus; HET:
DNA; NMR {Rattus norvegicus}
Length = 82
Score = 78.6 bits (195), Expect = 1e-17
Identities = 31/78 (39%), Positives = 37/78 (47%), Gaps = 3/78 (3%)
Query: 1021 CHICGK--SLKGNLKDHILKCHTGERPYKCDVCGSSFKDKWYLGVHMRKHNGEKPYNCDY 1078
C ICGK L H L H+ RPY C CG F K + H H GEKP+ C
Sbjct: 4 CKICGKSFKRSSTLSTH-LLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQV 62
Query: 1079 CGQTFAARSTFTFHLKKH 1096
CG+ F+ S H +KH
Sbjct: 63 CGKAFSQSSNLITHSRKH 80
Score = 73.6 bits (182), Expect = 6e-16
Identities = 34/80 (42%), Positives = 44/80 (55%), Gaps = 5/80 (6%)
Query: 995 CKVCGA--KIKGNLQKHMLSHTGEKPFCCHICGK--SLKGNLKDHILKCHTGERPYKCDV 1050
CK+CG K L H+L H+ +P+ C CGK K ++K H HTGE+P+KC V
Sbjct: 4 CKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHT-FIHTGEKPHKCQV 62
Query: 1051 CGSSFKDKWYLGVHMRKHNG 1070
CG +F L H RKH G
Sbjct: 63 CGKAFSQSSNLITHSRKHTG 82
Score = 62.8 bits (154), Expect = 4e-12
Identities = 27/89 (30%), Positives = 41/89 (46%), Gaps = 19/89 (21%)
Query: 1511 FECDFCKKKFYRNFDLQEHINTHTGNKPYQCQICNKSFGTRRNYRLHLKRHKRSAGQLKP 1570
F+C C K F R+ L H+ H+ +PY CQ C K F + + +K+H
Sbjct: 2 FDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRF----HQKSDMKKHTF------- 50
Query: 1571 EDIH------ECKICHKIFLENSRLTRHM 1593
IH +C++C K F ++S L H
Sbjct: 51 --IHTGEKPHKCQVCGKAFSQSSNLITHS 77
Score = 62.8 bits (154), Expect = 4e-12
Identities = 32/86 (37%), Positives = 42/86 (48%), Gaps = 7/86 (8%)
Query: 599 YMCDICGKQFTTLSYLDLHRKSHNETVKRKEEDKKYECDSCNKKFWSKRALSEHMIIHTG 658
+ C ICGK F S L H H++T + Y C C K+F K + +H IHTG
Sbjct: 2 FDCKICGKSFKRSSTLSTHLLIHSDT-------RPYPCQYCGKRFHQKSDMKKHTFIHTG 54
Query: 659 IKEHQCHVCNTAFYHIRSLSRHLKIH 684
K H+C VC AF +L H + H
Sbjct: 55 EKPHKCQVCGKAFSQSSNLITHSRKH 80
Score = 61.3 bits (150), Expect = 1e-11
Identities = 28/87 (32%), Positives = 49/87 (56%), Gaps = 10/87 (11%)
Query: 1477 YACDVCGKQFTSTNRVSQHKAHSHFGIIKTIQRKFECDFCKKKFYRNFDLQEHINTHTGN 1536
+ C +CGK F ++ +S H +I + R + C +C K+F++ D+++H HTG
Sbjct: 2 FDCKICGKSFKRSSTLSTHL------LIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGE 55
Query: 1537 KPYQCQICNKSFGTRRNYRLHLKRHKR 1563
KP++CQ+C K+F + +L H R
Sbjct: 56 KPHKCQVCGKAF----SQSSNLITHSR 78
Score = 59.7 bits (146), Expect = 4e-11
Identities = 28/77 (36%), Positives = 40/77 (51%), Gaps = 4/77 (5%)
Query: 1952 CKVCGA--KIKGNMKRHMLSHTGEKPFCCDICGK--SLKGNLKAHILRCQGERPYKCDVC 2007
CK+CG K + H+L H+ +P+ C CGK K ++K H GE+P+KC VC
Sbjct: 4 CKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVC 63
Query: 2008 GSSFKDKKHFSVHIRNH 2024
G +F + H R H
Sbjct: 64 GKAFSQSSNLITHSRKH 80
Score = 59.7 bits (146), Expect = 5e-11
Identities = 26/72 (36%), Positives = 41/72 (56%), Gaps = 6/72 (8%)
Query: 868 YVCDMCGKQFTSNNRVSQHKAYSHFGIIKTIERKFECDYCKMKFKSKSFLSEHINTHTGN 927
+ C +CGK F ++ +S H +I + R + C YC +F KS + +H HTG
Sbjct: 2 FDCKICGKSFKRSSTLSTHL------LIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGE 55
Query: 928 KPYQCQICKKSF 939
KP++CQ+C K+F
Sbjct: 56 KPHKCQVCGKAF 67
Score = 57.8 bits (141), Expect = 2e-10
Identities = 19/51 (37%), Positives = 26/51 (50%)
Query: 1046 YKCDVCGSSFKDKWYLGVHMRKHNGEKPYNCDYCGQTFAARSTFTFHLKKH 1096
+ C +CG SFK L H+ H+ +PY C YCG+ F +S H H
Sbjct: 2 FDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIH 52
Score = 57.4 bits (140), Expect = 3e-10
Identities = 30/83 (36%), Positives = 45/83 (54%), Gaps = 7/83 (8%)
Query: 902 FECDYCKMKFKSKSFLSEHINTHTGNKPYQCQICKKSFANKRSYQRDLKRHKQLAGQLKP 961
F+C C FK S LS H+ H+ +PY CQ C K F +++S D+K+H + KP
Sbjct: 2 FDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRF-HQKS---DMKKHTFIHTGEKP 57
Query: 962 EDIHECKICHKTFLEKGSLAKHM 984
H+C++C K F + +L H
Sbjct: 58 ---HKCQVCGKAFSQSSNLITHS 77
Score = 50.1 bits (121), Expect = 9e-08
Identities = 28/88 (31%), Positives = 36/88 (40%), Gaps = 8/88 (9%)
Query: 571 QCPICEKIFAAPKQMRMHLRHVHSSIKRYMCDICGKQFTTLSYLDLHRKSHNETVKRKEE 630
C IC K F + HL +HS + Y C CGK+F S + H H
Sbjct: 3 DCKICGKSFKRSSTLSTHLL-IHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTG------- 54
Query: 631 DKKYECDSCNKKFWSKRALSEHMIIHTG 658
+K ++C C K F L H HTG
Sbjct: 55 EKPHKCQVCGKAFSQSSNLITHSRKHTG 82
Score = 48.6 bits (117), Expect = 4e-07
Identities = 26/86 (30%), Positives = 39/86 (45%), Gaps = 7/86 (8%)
Query: 841 CPVCHKTYSTPKSMRKHLREVHSSQKKYVCDMCGKQFTSNNRVSQHKAYSHFGIIKTIER 900
C +C K++ ++ HL +HS + Y C CGK+F + + +H I T E+
Sbjct: 4 CKICGKSFKRSSTLSTHLL-IHSDTRPYPCQYCGKRFHQKSDMKKHT------FIHTGEK 56
Query: 901 KFECDYCKMKFKSKSFLSEHINTHTG 926
+C C F S L H HTG
Sbjct: 57 PHKCQVCGKAFSQSSNLITHSRKHTG 82
Score = 48.2 bits (116), Expect = 4e-07
Identities = 25/69 (36%), Positives = 43/69 (62%), Gaps = 4/69 (5%)
Query: 1326 YLCDICGKQFTSTNRVNIHKACVHSSTGNK-FECIYCKKKYRRKFDLKEHINKHTGNKPY 1384
+ C ICGK F ++ ++ H +H + + + C YC K++ +K D+K+H HTG KP+
Sbjct: 2 FDCKICGKSFKRSSTLSTHLL-IH--SDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPH 58
Query: 1385 HCQICKESF 1393
CQ+C ++F
Sbjct: 59 KCQVCGKAF 67
Score = 43.6 bits (104), Expect = 2e-05
Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 5/83 (6%)
Query: 1299 CPVCHKTYSTPKTMRRHLRQVHTSQKRYLCDICGKQFTSTNRVNIHKACVHSSTGNK-FE 1357
C +C K++ T+ HL +H+ + Y C CGK+F + + H +H TG K +
Sbjct: 4 CKICGKSFKRSSTLSTHLL-IHSDTRPYPCQYCGKRFHQKSDMKKHTF-IH--TGEKPHK 59
Query: 1358 CIYCKKKYRRKFDLKEHINKHTG 1380
C C K + + +L H KHTG
Sbjct: 60 CQVCGKAFSQSSNLITHSRKHTG 82
Score = 41.6 bits (99), Expect = 1e-04
Identities = 25/87 (28%), Positives = 40/87 (45%), Gaps = 8/87 (9%)
Query: 1450 KCPVCHKTYSTPRQMRIHLREAHS-QKKYACDVCGKQFTSTNRVSQHKAHSHFGIIKTIQ 1508
C +C K++ + HL HS + Y C CGK+F + + +H I T +
Sbjct: 3 DCKICGKSFKRSSTLSTHLL-IHSDTRPYPCQYCGKRFHQKSDMKKHT------FIHTGE 55
Query: 1509 RKFECDFCKKKFYRNFDLQEHINTHTG 1535
+ +C C K F ++ +L H HTG
Sbjct: 56 KPHKCQVCGKAFSQSSNLITHSRKHTG 82
Score = 40.1 bits (95), Expect = 3e-04
Identities = 24/82 (29%), Positives = 35/82 (42%), Gaps = 16/82 (19%)
Query: 401 CDICGKQFTSNIHASRH-------KNYAHSRDRQKMECDYCKRKFTCKRYLAEHINAHTG 453
C ICGK F + S H + Y C YC ++F K + +H HTG
Sbjct: 4 CKICGKSFKRSSTLSTHLLIHSDTRPY---------PCQYCGKRFHQKSDMKKHTFIHTG 54
Query: 454 NTIYGCRICKKTFLYTNGLRRH 475
+ C++C K F ++ L H
Sbjct: 55 EKPHKCQVCGKAFSQSSNLITH 76
Score = 39.3 bits (93), Expect = 8e-04
Identities = 23/91 (25%), Positives = 35/91 (38%), Gaps = 18/91 (19%)
Query: 370 QCPLCTKIFTTAKHMRVHLRSVHNGKERKFICDICGKQFTSNIHASRH-------KNYAH 422
C +C K F + + HL +H+ R + C CGK+F +H K +
Sbjct: 3 DCKICGKSFKRSSTLSTHLL-IHSD-TRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPH-- 58
Query: 423 SRDRQKMECDYCKRKFTCKRYLAEHINAHTG 453
+C C + F+ L H HTG
Sbjct: 59 -------KCQVCGKAFSQSSNLITHSRKHTG 82
Score = 35.9 bits (84), Expect = 0.011
Identities = 24/67 (35%), Positives = 33/67 (49%), Gaps = 8/67 (11%)
Query: 663 QCHVCNTAFYHIRSLSRHLKIH--EYNESKMYKCPVCSKMFTELYEMKRH-RDHKHGGKC 719
C +C +F +LS HL IH + Y C C K F + +MK+H H G K
Sbjct: 3 DCKICGKSFKRSSTLSTHLLIHSDT----RPYPCQYCGKRFHQKSDMKKHTFIHT-GEKP 57
Query: 720 HVCKICG 726
H C++CG
Sbjct: 58 HKCQVCG 64
Score = 35.5 bits (83), Expect = 0.015
Identities = 33/106 (31%), Positives = 38/106 (35%), Gaps = 35/106 (33%)
Query: 1889 CPICKKGFIALKHMKTHLKKHMWKAGEIPLEDTYLCDLCSKVFLEHKDMIRHREWVHGDK 1948
C IC K F + THL H + P Y C C K F + DM +H
Sbjct: 4 CKICGKSFKRSSTLSTHLLIH---SDTRP----YPCQYCGKRFHQKSDMKKHT------- 49
Query: 1949 CHVCKVCGAKIKGNMKRHMLSHTGEKPFCCDICGK--SLKGNLKAH 1992
I HTGEKP C +CGK S NL H
Sbjct: 50 ---------FI----------HTGEKPHKCQVCGKAFSQSSNLITH 76
Score = 33.2 bits (77), Expect = 0.089
Identities = 18/57 (31%), Positives = 26/57 (45%), Gaps = 7/57 (12%)
Query: 751 SFHCDTCGKYFRSRQICNKHIKRVHLNPT--KTFKCDLCSDRFSTSAKLKKHVDKIH 805
SF C CGK F+ + H +H + + + C C RF + +KKH IH
Sbjct: 1 SFDCKICGKSFKRSSTLSTH-LLIH---SDTRPYPCQYCGKRFHQKSDMKKH-TFIH 52
Score = 32.4 bits (75), Expect = 0.21
Identities = 12/46 (26%), Positives = 22/46 (47%)
Query: 430 ECDYCKRKFTCKRYLAEHINAHTGNTIYGCRICKKTFLYTNGLRRH 475
+C C + F L+ H+ H+ Y C+ C K F + +++H
Sbjct: 3 DCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKH 48
Score = 30.1 bits (69), Expect = 1.2
Identities = 27/85 (31%), Positives = 41/85 (48%), Gaps = 6/85 (7%)
Query: 1825 FKCDLCQKQFKASRSLQCHKQFVHLGVHKPKFLNMECDYCSRKFPSKNEVTNHIKSHMGV 1884
F C +C K FK S +L H +H +P C YC ++F K+++ H H G
Sbjct: 2 FDCKICGKSFKRSSTLSTH-LLIHSD-TRP----YPCQYCGKRFHQKSDMKKHTFIHTGE 55
Query: 1885 RDILCPICKKGFIALKHMKTHLKKH 1909
+ C +C K F ++ TH +KH
Sbjct: 56 KPHKCQVCGKAFSQSSNLITHSRKH 80
Score = 29.7 bits (68), Expect = 1.9
Identities = 19/56 (33%), Positives = 25/56 (44%), Gaps = 7/56 (12%)
Query: 752 FHCDTCGKYFRSRQICNKHIKRVHLNPT--KTFKCDLCSDRFSTSAKLKKHVDKIH 805
+ C CGK F + KH +H T K KC +C FS S+ L H + H
Sbjct: 30 YPCQYCGKRFHQKSDMKKH-TFIH---TGEKPHKCQVCGKAFSQSSNLITH-SRKH 80
Score = 28.2 bits (64), Expect = 7.2
Identities = 9/26 (34%), Positives = 12/26 (46%), Gaps = 1/26 (3%)
Query: 2002 YKCDVCGSSFKDKKHFSVHIRNH-GE 2026
+ C +CG SFK S H+ H
Sbjct: 2 FDCKICGKSFKRSSTLSTHLLIHSDT 27
>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens}
Length = 78
Score = 78.2 bits (193), Expect = 1e-17
Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 3/60 (5%)
Query: 1040 HTGERPYKCDVCGSSFKDKWYLGVHMRKH---NGEKPYNCDYCGQTFAARSTFTFHLKKH 1096
+G +C++CG + + K L H RKH + C++CG+ F + H K
Sbjct: 2 SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKS 61
Score = 74.4 bits (183), Expect = 3e-16
Identities = 17/78 (21%), Positives = 27/78 (34%), Gaps = 7/78 (8%)
Query: 1013 HTGEKPFCCHICGKS--LKGNLKDHILKCHT---GERPYKCDVCGSSFKDKWYLGVHMRK 1067
+G C ICG + K +L H K H + C+ CG F+ + H K
Sbjct: 2 SSGSSGLQCEICGFTCRQKASLNWHQRK-HAETVAALRFPCEFCGKRFEKPDSVAAHRSK 60
Query: 1068 HNGEK-PYNCDYCGQTFA 1084
+ + G +
Sbjct: 61 SHPALLLAPQESSGPSSG 78
Score = 67.0 bits (164), Expect = 1e-13
Identities = 13/60 (21%), Positives = 21/60 (35%), Gaps = 5/60 (8%)
Query: 1970 HTGEKPFCCDICGKS--LKGNLKAHIL---RCQGERPYKCDVCGSSFKDKKHFSVHIRNH 2024
+G C+ICG + K +L H + C+ CG F+ + H
Sbjct: 2 SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKS 61
Score = 58.6 bits (142), Expect = 9e-11
Identities = 17/81 (20%), Positives = 29/81 (35%), Gaps = 4/81 (4%)
Query: 924 HTGNKPYQCQICKKSFANKRSYQRDLKRHKQLAGQLKPEDIHECKICHKTFLEKGSLAKH 983
+G+ QC+IC + K S ++H + C+ C K F + S+A H
Sbjct: 2 SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAA-LR---FPCEFCGKRFEKPDSVAAH 57
Query: 984 MNWVHGDKCHICKVCGAKIKG 1004
+ H + G
Sbjct: 58 RSKSHPALLLAPQESSGPSSG 78
Score = 57.8 bits (140), Expect = 2e-10
Identities = 13/68 (19%), Positives = 27/68 (39%), Gaps = 4/68 (5%)
Query: 1533 HTGNKPYQCQICNKSFGTRRNYRLHLKRHKRSAGQLKPEDIHECKICHKIFLENSRLTRH 1592
+G+ QC+IC + + + H ++H + C+ C K F + + H
Sbjct: 2 SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAA-LR---FPCEFCGKRFEKPDSVAAH 57
Query: 1593 MNFTHGDK 1600
+ +H
Sbjct: 58 RSKSHPAL 65
Score = 57.4 bits (139), Expect = 3e-10
Identities = 16/75 (21%), Positives = 28/75 (37%), Gaps = 4/75 (5%)
Query: 593 HSSIKRYMCDICGKQFTTLSYLDLHRKSHNETVKRKEEDKKYECDSCNKKFWSKRALSEH 652
S C+ICG + L+ H++ H ETV ++ C+ C K+F +++ H
Sbjct: 2 SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVA----ALRFPCEFCGKRFEKPDSVAAH 57
Query: 653 MIIHTGIKEHQCHVC 667
Sbjct: 58 RSKSHPALLLAPQES 72
Score = 51.6 bits (124), Expect = 3e-08
Identities = 15/69 (21%), Positives = 24/69 (34%), Gaps = 1/69 (1%)
Query: 656 HTGIKEHQCHVCNTAFYHIRSLSRHLKIHEYNES-KMYKCPVCSKMFTELYEMKRHRDHK 714
+G QC +C SL+ H + H + + C C K F + + HR
Sbjct: 2 SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKS 61
Query: 715 HGGKCHVCK 723
H +
Sbjct: 62 HPALLLAPQ 70
Score = 50.1 bits (120), Expect = 9e-08
Identities = 11/56 (19%), Positives = 17/56 (30%), Gaps = 3/56 (5%)
Query: 632 KKYECDSCNKKFWSKRALSEHMIIHT---GIKEHQCHVCNTAFYHIRSLSRHLKIH 684
+C+ C K +L+ H H C C F S++ H
Sbjct: 6 SGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKS 61
Score = 49.7 bits (119), Expect = 2e-07
Identities = 15/70 (21%), Positives = 26/70 (37%), Gaps = 3/70 (4%)
Query: 1320 HTSQKRYLCDICGKQFTSTNRVNIHKACVHSST-GNK-FECIYCKKKYRRKFDLKEHINK 1377
+ C+ICG +N H+ H+ T F C +C K++ + + H +K
Sbjct: 2 SSGSSGLQCEICGFTCRQKASLNWHQR-KHAETVAALRFPCEFCGKRFEKPDSVAAHRSK 60
Query: 1378 HTGNKPYHCQ 1387
Q
Sbjct: 61 SHPALLLAPQ 70
Score = 49.3 bits (118), Expect = 2e-07
Identities = 15/77 (19%), Positives = 28/77 (36%), Gaps = 6/77 (7%)
Query: 1475 KKYACDVCGKQFTSTNRVSQH-KAHSHFGIIKTIQRKFECDFCKKKFYRNFDLQEHINT- 1532
C++CG ++ H + H+ +F C+FC K+F + + H +
Sbjct: 6 SGLQCEICGFTCRQKASLNWHQRKHAE----TVAALRFPCEFCGKRFEKPDSVAAHRSKS 61
Query: 1533 HTGNKPYQCQICNKSFG 1549
H + S G
Sbjct: 62 HPALLLAPQESSGPSSG 78
Score = 48.6 bits (116), Expect = 4e-07
Identities = 14/60 (23%), Positives = 22/60 (36%), Gaps = 8/60 (13%)
Query: 1351 STGNK-FECIYCKKKYRRKFDLKEHINKHT---GNKPYHCQICKESFYTLKTYRGDLKRH 1406
S+G+ +C C R+K L H KH + C+ C + F + H
Sbjct: 2 SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRF----EKPDSVAAH 57
Score = 46.6 bits (111), Expect = 2e-06
Identities = 14/96 (14%), Positives = 24/96 (25%), Gaps = 32/96 (33%)
Query: 1922 YLCDLCSKVFLEHKDMIRHREWVHGDKCHVCKVCGAKIKGNMKRHMLSHT---GEKPFCC 1978
C++C + K ++ H H F C
Sbjct: 8 LQCEICGFTCRQ--------------------------KASLNWHQRKHAETVAALRFPC 41
Query: 1979 DICGKSL--KGNLKAHILRCQGE-RPYKCDVCGSSF 2011
+ CGK ++ AH + + G S
Sbjct: 42 EFCGKRFEKPDSVAAHRSKSHPALLLAPQESSGPSS 77
Score = 46.2 bits (110), Expect = 2e-06
Identities = 12/76 (15%), Positives = 25/76 (32%), Gaps = 3/76 (3%)
Query: 862 HSSQKKYVCDMCGKQFTSNNRVSQHKAYSHFGIIKTIERKFECDYCKMKFKSKSFLSEHI 921
S C++CG ++ H+ H +F C++C +F+ ++ H
Sbjct: 2 SSGSSGLQCEICGFTCRQKASLNWHQR-KH--AETVAALRFPCEFCGKRFEKPDSVAAHR 58
Query: 922 NTHTGNKPYQCQICKK 937
+ Q
Sbjct: 59 SKSHPALLLAPQESSG 74
Score = 46.2 bits (110), Expect = 2e-06
Identities = 15/54 (27%), Positives = 21/54 (38%), Gaps = 4/54 (7%)
Query: 571 QCPICEKIFAAPKQMRMHLRHVHSSI---KRYMCDICGKQFTTLSYLDLHRKSH 621
QC IC + H R H+ R+ C+ CGK+F + HR
Sbjct: 9 QCEICGFTCRQKASLNWHQR-KHAETVAALRFPCEFCGKRFEKPDSVAAHRSKS 61
Score = 45.9 bits (109), Expect = 3e-06
Identities = 14/73 (19%), Positives = 22/73 (30%), Gaps = 4/73 (5%)
Query: 1889 CPICKKGFIALKHMKTHLKKHMWKAGEIPLEDTYLCDLCSKVFLEHKDMIRHREWVHGDK 1948
C IC + H +KH + + C+ C K F + + HR H
Sbjct: 10 CEICGFTCRQKASLNWHQRKHAETVAALR----FPCEFCGKRFEKPDSVAAHRSKSHPAL 65
Query: 1949 CHVCKVCGAKIKG 1961
+ G
Sbjct: 66 LLAPQESSGPSSG 78
Score = 45.5 bits (108), Expect = 4e-06
Identities = 19/71 (26%), Positives = 25/71 (35%), Gaps = 5/71 (7%)
Query: 752 FHCDTCGKYFRSRQICNKHIKRVHLNPT--KTFKCDLCSDRFSTSAKLKKHVDKIH--FT 807
C+ CG R + N H +R H F C+ C RF + H K H
Sbjct: 8 LQCEICGFTCRQKASLNWH-QRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALL 66
Query: 808 PEFQEPSKKNE 818
QE S +
Sbjct: 67 LAPQESSGPSS 77
Score = 42.8 bits (101), Expect = 4e-05
Identities = 15/57 (26%), Positives = 25/57 (43%), Gaps = 4/57 (7%)
Query: 1299 CPVCHKTYSTPKTMRRHLRQVHTSQ---KRYLCDICGKQFTSTNRVNIHKACVHSST 1352
C +C T ++ H R H R+ C+ CGK+F + V H++ H +
Sbjct: 10 CEICGFTCRQKASLNWHQR-KHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPAL 65
Score = 42.0 bits (99), Expect = 8e-05
Identities = 11/71 (15%), Positives = 24/71 (33%), Gaps = 3/71 (4%)
Query: 396 ERKFICDICGKQFTSNIHASRHKNYAHSRDRQKM--ECDYCKRKFTCKRYLAEHINAHTG 453
C+ICG + H+ H+ + C++C ++F +A H +
Sbjct: 5 SSGLQCEICGFTCRQKASLNWHQR-KHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHP 63
Query: 454 NTIYGCRICKK 464
+ +
Sbjct: 64 ALLLAPQESSG 74
Score = 40.9 bits (96), Expect = 2e-04
Identities = 15/54 (27%), Positives = 27/54 (50%), Gaps = 3/54 (5%)
Query: 1450 KCPVCHKTYSTPRQMRIHLR---EAHSQKKYACDVCGKQFTSTNRVSQHKAHSH 1500
+C +C T + H R E + ++ C+ CGK+F + V+ H++ SH
Sbjct: 9 QCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSH 62
Score = 40.5 bits (95), Expect = 3e-04
Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 4/54 (7%)
Query: 841 CPVCHKTYSTPKSMRKHLREVHSSQ---KKYVCDMCGKQFTSNNRVSQHKAYSH 891
C +C T S+ H R H+ ++ C+ CGK+F + V+ H++ SH
Sbjct: 10 CEICGFTCRQKASLNWHQR-KHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSH 62
Score = 40.1 bits (94), Expect = 3e-04
Identities = 12/57 (21%), Positives = 17/57 (29%), Gaps = 3/57 (5%)
Query: 430 ECDYCKRKFTCKRYLAEHINAHT---GNTIYGCRICKKTFLYTNGLRRHILSRHKDT 483
+C+ C K L H H + C C K F + + H H
Sbjct: 9 QCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPAL 65
Score = 40.1 bits (94), Expect = 4e-04
Identities = 15/69 (21%), Positives = 24/69 (34%), Gaps = 2/69 (2%)
Query: 286 FKCDICVASFLTPHKLKTHIKTKHRTQLKELYTFECQHCEDKFSTPFELNKHNESKHEKG 345
+C+IC + L H + H + F C+ C +F P + H H
Sbjct: 8 LQCEICGFTCRQKASLNWHQRK-HAETVAA-LRFPCEFCGKRFEKPDSVAAHRSKSHPAL 65
Query: 346 RKLNPETGG 354
E+ G
Sbjct: 66 LLAPQESSG 74
Score = 39.7 bits (93), Expect = 5e-04
Identities = 14/56 (25%), Positives = 23/56 (41%), Gaps = 3/56 (5%)
Query: 370 QCPLCTKIFTTAKHMRVHLRSVHNGK--ERKFICDICGKQFTSNIHASRHKNYAHS 423
QC +C + H R H +F C+ CGK+F + H++ +H
Sbjct: 9 QCEICGFTCRQKASLNWHQR-KHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHP 63
Score = 38.5 bits (90), Expect = 0.001
Identities = 11/59 (18%), Positives = 22/59 (37%), Gaps = 3/59 (5%)
Query: 1823 KKFKCDLCQKQFKASRSLQCHKQFVHLGVHKPKFLNMECDYCSRKFPSKNEVTNHIKSH 1881
+C++C + SL H++ H C++C ++F + V H
Sbjct: 6 SGLQCEICGFTCRQKASLNWHQR-KHAETVAAL--RFPCEFCGKRFEKPDSVAAHRSKS 61
Score = 38.5 bits (90), Expect = 0.001
Identities = 13/59 (22%), Positives = 22/59 (37%), Gaps = 4/59 (6%)
Query: 1793 EKTKLCPVCNKEYATPVTMRKHLREVHVSK---KKFKCDLCQKQFKASRSLQCHKQFVH 1848
C +C ++ H R H +F C+ C K+F+ S+ H+ H
Sbjct: 5 SSGLQCEICGFTCRQKASLNWHQR-KHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSH 62
Score = 37.4 bits (87), Expect = 0.003
Identities = 14/98 (14%), Positives = 23/98 (23%), Gaps = 26/98 (26%)
Query: 780 KTFKCDLCSDRFSTSAKLKKHVDKIHFTPEFQEPSKKNEPLDTGDYTLEQWNELVTAQSK 839
+C++C A L H + H
Sbjct: 6 SGLQCEICGFTCRQKASLNWHQ-RKHAETVAALRFP------------------------ 40
Query: 840 DCPVCHKTYSTPKSMRKHLREVHSSQKKYVCDMCGKQF 877
C C K + P S+ H + H + + G
Sbjct: 41 -CEFCGKRFEKPDSVAAHRSKSHPALLLAPQESSGPSS 77
Score = 37.0 bits (86), Expect = 0.005
Identities = 12/56 (21%), Positives = 15/56 (26%), Gaps = 3/56 (5%)
Query: 256 FTCDTCDKPFDTIEKCRRHAIRMHMNPC--KMFKCDICVASFLTPHKLKTHIKTKH 309
C+ C H R H F C+ C F P + H H
Sbjct: 8 LQCEICGFTCRQKASLNWH-QRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSH 62
Score = 35.5 bits (82), Expect = 0.015
Identities = 14/65 (21%), Positives = 17/65 (26%), Gaps = 2/65 (3%)
Query: 104 TCRICTEVFENLTLLRRHMRV--KHPGEQNLPCRLCDMSFSNKYQKKKHYSAFHKGMPFI 161
C IC L H R + PC C F H S H +
Sbjct: 9 QCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLLA 68
Query: 162 PSFTC 166
P +
Sbjct: 69 PQESS 73
Score = 33.1 bits (76), Expect = 0.094
Identities = 14/109 (12%), Positives = 27/109 (24%), Gaps = 38/109 (34%)
Query: 1378 HTGNKPYHCQICKESFYTLKTYRGDLKRHEQLAEQSDEMHSTSKFQNKIKKPLDTGDLSW 1437
+G+ C+IC + + L H++ H+ +
Sbjct: 2 SSGSSGLQCEICGFTC----RQKASLNWHQR-------KHAETV---------------- 34
Query: 1438 EEWNELVLSGTK--KCPVCHKTYSTPRQMRIHLREAHSQKKYACDVCGK 1484
C C K + P + H ++H A
Sbjct: 35 ---------AALRFPCEFCGKRFEKPDSVAAHRSKSHPALLLAPQESSG 74
Score = 31.2 bits (71), Expect = 0.55
Identities = 15/77 (19%), Positives = 25/77 (32%), Gaps = 16/77 (20%)
Query: 451 HTGNTIYGCRICKKTFLYTNGLRRHILSRHKDTDVVILNEVKDIFPSHLQSYQIKCRYCA 510
+G++ C IC T L H +H +T + C +C
Sbjct: 2 SSGSSGLQCEICGFTCRQKASLNWHQR-KHAETVAA---------------LRFPCEFCG 45
Query: 511 RTFSTQNDLKEHVSSVH 527
+ F + + H S H
Sbjct: 46 KRFEKPDSVAAHRSKSH 62
Score = 29.7 bits (67), Expect = 1.7
Identities = 14/61 (22%), Positives = 18/61 (29%), Gaps = 1/61 (1%)
Query: 126 HPGEQNLPCRLCDMSFSNKYQKKKHYSAFHKGMPFIPSFTCPICQKIFKNKEWYLDHLSL 185
G L C +C + K H H F C C K F+ + H S
Sbjct: 2 SSGSSGLQCEICGFTCRQKASLNWHQRK-HAETVAALRFPCEFCGKRFEKPDSVAAHRSK 60
Query: 186 H 186
Sbjct: 61 S 61
Score = 29.3 bits (66), Expect = 2.5
Identities = 7/37 (18%), Positives = 13/37 (35%)
Query: 1299 CPVCHKTYSTPKTMRRHLRQVHTSQKRYLCDICGKQF 1335
C C K + P ++ H + H + + G
Sbjct: 41 CEFCGKRFEKPDSVAAHRSKSHPALLLAPQESSGPSS 77
Score = 27.8 bits (62), Expect = 9.1
Identities = 8/31 (25%), Positives = 12/31 (38%)
Query: 1651 FKCGICGKCYKTREKCRRHIKRIHLNSRNEP 1681
F C CGK ++ + H + H P
Sbjct: 39 FPCEFCGKRFEKPDSVAAHRSKSHPALLLAP 69
>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
g.37.1.1 g.37.1.1
Length = 72
Score = 77.5 bits (192), Expect = 2e-17
Identities = 27/71 (38%), Positives = 32/71 (45%), Gaps = 3/71 (4%)
Query: 1006 LQKHMLSHTGEKPFCCHICGK--SLKGNLKDHILKCHTGERPYKCDVCGSSFKDKWYLGV 1063
H+GEKP+ C CGK S L H + HTGE+PYKC CG +F L
Sbjct: 2 SSGSSGIHSGEKPYGCVECGKAFSRSSILVQH-QRVHTGEKPYKCLECGKAFSQNSGLIN 60
Query: 1064 HMRKHNGEKPY 1074
H R H
Sbjct: 61 HQRIHTSGPSS 71
Score = 71.7 bits (177), Expect = 2e-15
Identities = 25/57 (43%), Positives = 31/57 (54%)
Query: 1040 HTGERPYKCDVCGSSFKDKWYLGVHMRKHNGEKPYNCDYCGQTFAARSTFTFHLKKH 1096
H+GE+PY C CG +F L H R H GEKPY C CG+ F+ S H + H
Sbjct: 9 HSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIH 65
Score = 56.3 bits (137), Expect = 5e-10
Identities = 25/69 (36%), Positives = 29/69 (42%), Gaps = 11/69 (15%)
Query: 1965 RHMLSHTGEKPFCCDICGK--SLKGNLKAHILRCQ----GERPYKCDVCGSSFKDKKHFS 2018
H+GEKP+ C CGK S L H Q GE+PYKC CG +F
Sbjct: 4 GSSGIHSGEKPYGCVECGKAFSRSSILVQH----QRVHTGEKPYKCLECGKAFSQNSGLI 59
Query: 2019 VHIRNH-GE 2026
H R H
Sbjct: 60 NHQRIHTSG 68
Score = 51.3 bits (124), Expect = 3e-08
Identities = 23/78 (29%), Positives = 31/78 (39%), Gaps = 7/78 (8%)
Query: 1526 LQEHINTHTGNKPYQCQICNKSFGTRRNYRLHLKRHKRSAGQLKPEDIHECKICHKIFLE 1585
H+G KPY C C K+F + L +H+R KP ++C C K F +
Sbjct: 2 SSGSSGIHSGEKPYGCVECGKAF----SRSSILVQHQRVHTGEKP---YKCLECGKAFSQ 54
Query: 1586 NSRLTRHMNFTHGDKCHG 1603
NS L H G
Sbjct: 55 NSGLINHQRIHTSGPSSG 72
Score = 50.9 bits (123), Expect = 4e-08
Identities = 20/53 (37%), Positives = 25/53 (47%)
Query: 632 KKYECDSCNKKFWSKRALSEHMIIHTGIKEHQCHVCNTAFYHIRSLSRHLKIH 684
K Y C C K F L +H +HTG K ++C C AF L H +IH
Sbjct: 13 KPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIH 65
Score = 50.5 bits (122), Expect = 6e-08
Identities = 21/75 (28%), Positives = 32/75 (42%), Gaps = 7/75 (9%)
Query: 856 KHLREVHSSQKKYVCDMCGKQFTSNNRVSQHKAYSHFGIIKTIERKFECDYCKMKFKSKS 915
+HS +K Y C CGK F+ ++ + QH+ + T E+ ++C C F S
Sbjct: 4 GSSG-IHSGEKPYGCVECGKAFSRSSILVQHQ------RVHTGEKPYKCLECGKAFSQNS 56
Query: 916 FLSEHINTHTGNKPY 930
L H HT
Sbjct: 57 GLINHQRIHTSGPSS 71
Score = 49.4 bits (119), Expect = 2e-07
Identities = 20/53 (37%), Positives = 27/53 (50%), Gaps = 4/53 (7%)
Query: 1511 FECDFCKKKFYRNFDLQEHINTHTGNKPYQCQICNKSFGTRRNYRLHLKRHKR 1563
+ C C K F R+ L +H HTG KPY+C C K+F + L H+R
Sbjct: 15 YGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAF----SQNSGLINHQR 63
Score = 48.6 bits (117), Expect = 2e-07
Identities = 22/75 (29%), Positives = 33/75 (44%), Gaps = 10/75 (13%)
Query: 1465 RIHLREAHSQKKYACDVCGKQFTSTNRVSQHKAHSHFGIIKTIQRKFECDFCKKKFYRNF 1524
IH E K Y C CGK F+ ++ + QH+ + T ++ ++C C K F +N
Sbjct: 7 GIHSGE----KPYGCVECGKAFSRSSILVQHQ------RVHTGEKPYKCLECGKAFSQNS 56
Query: 1525 DLQEHINTHTGNKPY 1539
L H HT
Sbjct: 57 GLINHQRIHTSGPSS 71
Score = 48.2 bits (116), Expect = 3e-07
Identities = 22/62 (35%), Positives = 28/62 (45%), Gaps = 5/62 (8%)
Query: 989 GDKCHICKVCGA--KIKGNLQKHMLSHTGEKPFCCHICGK--SLKGNLKDHILKCHTGER 1044
G+K + C CG L +H HTGEKP+ C CGK S L +H + HT
Sbjct: 11 GEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINH-QRIHTSGP 69
Query: 1045 PY 1046
Sbjct: 70 SS 71
Score = 47.1 bits (113), Expect = 9e-07
Identities = 18/45 (40%), Positives = 24/45 (53%)
Query: 895 IKTIERKFECDYCKMKFKSKSFLSEHINTHTGNKPYQCQICKKSF 939
I + E+ + C C F S L +H HTG KPY+C C K+F
Sbjct: 8 IHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAF 52
Score = 47.1 bits (113), Expect = 1e-06
Identities = 24/73 (32%), Positives = 30/73 (41%), Gaps = 8/73 (10%)
Query: 588 HLRHVHSSIKRYMCDICGKQFTTLSYLDLHRKSHNETVKRKEEDKKYECDSCNKKFWSKR 647
+HS K Y C CGK F+ S L H++ H +K Y+C C K F
Sbjct: 5 SSG-IHSGEKPYGCVECGKAFSRSSILVQHQRVHTG-------EKPYKCLECGKAFSQNS 56
Query: 648 ALSEHMIIHTGIK 660
L H IHT
Sbjct: 57 GLINHQRIHTSGP 69
Score = 46.7 bits (112), Expect = 1e-06
Identities = 24/103 (23%), Positives = 34/103 (33%), Gaps = 33/103 (32%)
Query: 917 LSEHINTHTGNKPYQCQICKKSFANKRSYQRDLKRHKQLAGQLKPEDIHECKICHKTFLE 976
S H+G KPY C C K+F S L +H+++ KP ++C C K F +
Sbjct: 2 SSGSSGIHSGEKPYGCVECGKAF----SRSSILVQHQRVHTGEKP---YKCLECGKAFSQ 54
Query: 977 KGSLAKHMNWVHGDKCHICKVCGAKIKGNLQKHMLSHTGEKPF 1019
L H Q+ HT
Sbjct: 55 NSGLINH-----------------------QR---IHTSGPSS 71
Score = 46.3 bits (111), Expect = 2e-06
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 5/72 (6%)
Query: 1314 RHLRQVHTSQKRYLCDICGKQFTSTNRVNIHKACVHSSTGNK-FECIYCKKKYRRKFDLK 1372
+H+ +K Y C CGK F+ ++ + H+ VH TG K ++C+ C K + + L
Sbjct: 4 GSSG-IHSGEKPYGCVECGKAFSRSSILVQHQR-VH--TGEKPYKCLECGKAFSQNSGLI 59
Query: 1373 EHINKHTGNKPY 1384
H HT
Sbjct: 60 NHQRIHTSGPSS 71
Score = 45.2 bits (108), Expect = 5e-06
Identities = 21/65 (32%), Positives = 30/65 (46%), Gaps = 6/65 (9%)
Query: 649 LSEHMIIHTGIKEHQCHVCNTAFYHIRSLSRHLKIH--EYNESKMYKCPVCSKMFTELYE 706
S IH+G K + C C AF L +H ++H E K YKC C K F++
Sbjct: 2 SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGE----KPYKCLECGKAFSQNSG 57
Query: 707 MKRHR 711
+ H+
Sbjct: 58 LINHQ 62
Score = 41.7 bits (99), Expect = 7e-05
Identities = 13/36 (36%), Positives = 17/36 (47%)
Query: 1061 LGVHMRKHNGEKPYNCDYCGQTFAARSTFTFHLKKH 1096
H+GEKPY C CG+ F+ S H + H
Sbjct: 2 SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVH 37
Score = 39.4 bits (93), Expect = 6e-04
Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Query: 1352 TGNK-FECIYCKKKYRRKFDLKEHINKHTGNKPYHCQICKESF 1393
+G K + C+ C K + R L +H HTG KPY C C ++F
Sbjct: 10 SGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAF 52
Score = 35.5 bits (83), Expect = 0.010
Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 8/66 (12%)
Query: 1914 GEIPLEDTYLCDLCSKVFLEHKDMIRHREWVH-GDKCHVCKVCGA--KIKGNMKRHMLSH 1970
GE P Y C C K F +++H+ VH G+K + C CG + H H
Sbjct: 11 GEKP----YGCVECGKAFSRSSILVQHQR-VHTGEKPYKCLECGKAFSQNSGLINHQRIH 65
Query: 1971 TGEKPF 1976
T
Sbjct: 66 TSGPSS 71
Score = 35.5 bits (83), Expect = 0.013
Identities = 16/46 (34%), Positives = 20/46 (43%)
Query: 430 ECDYCKRKFTCKRYLAEHINAHTGNTIYGCRICKKTFLYTNGLRRH 475
C C + F+ L +H HTG Y C C K F +GL H
Sbjct: 16 GCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINH 61
Score = 32.8 bits (76), Expect = 0.11
Identities = 19/85 (22%), Positives = 30/85 (35%), Gaps = 22/85 (25%)
Query: 381 AKHMRVHLRSVHNGKERKFICDICGKQFTSNIHASRH-------KNYAHSRDRQKMECDY 433
+ +H +G E+ + C CGK F+ + +H K Y +C
Sbjct: 3 SGSSGIH-----SG-EKPYGCVECGKAFSRSSILVQHQRVHTGEKPY---------KCLE 47
Query: 434 CKRKFTCKRYLAEHINAHTGNTIYG 458
C + F+ L H HT G
Sbjct: 48 CGKAFSQNSGLINHQRIHTSGPSSG 72
Score = 30.5 bits (70), Expect = 0.75
Identities = 21/56 (37%), Positives = 28/56 (50%), Gaps = 7/56 (12%)
Query: 752 FHCDTCGKYFRSRQICNKHIKRVHLNPT--KTFKCDLCSDRFSTSAKLKKHVDKIH 805
+ C CGK F I +H +RVH T K +KC C FS ++ L H +IH
Sbjct: 15 YGCVECGKAFSRSSILVQH-QRVH---TGEKPYKCLECGKAFSQNSGLINH-QRIH 65
Score = 28.6 bits (65), Expect = 3.5
Identities = 21/71 (29%), Positives = 29/71 (40%), Gaps = 7/71 (9%)
Query: 1813 KHLREVHVSKKKFKCDLCQKQFKASRSLQCHKQFVHLGVHKPKFLNMECDYCSRKFPSKN 1872
+H +K + C C K F S L H Q VH G KP +C C + F +
Sbjct: 4 GSSG-IHSGEKPYGCVECGKAFSRSSILVQH-QRVHTG-EKP----YKCLECGKAFSQNS 56
Query: 1873 EVTNHIKSHMG 1883
+ NH + H
Sbjct: 57 GLINHQRIHTS 67
>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND,
transcription factor, kruppel-like factor, GC-box
promoter elements, structural genomics; NMR {Homo
sapiens}
Length = 100
Score = 76.9 bits (190), Expect = 7e-17
Identities = 34/97 (35%), Positives = 48/97 (49%), Gaps = 5/97 (5%)
Query: 1003 KGNLQKHMLSHTGEKPFCCHICGKSLKGNLKDHILKCHTGERPYKC--DVCGSSFKDKWY 1060
G + H + P C + KS +LK H L+ HTGE+PYKC + C F
Sbjct: 6 SGPDLEKRRIHYCDYPGCTKVYTKS--SHLKAH-LRTHTGEKPYKCTWEGCDWRFARSDE 62
Query: 1061 LGVHMRKHNGEKPYNCDYCGQTFAARSTFTFHLKKHE 1097
L H RKH G KP+ C C ++F+ H+K+H+
Sbjct: 63 LTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRHQ 99
Score = 64.2 bits (157), Expect = 2e-12
Identities = 33/94 (35%), Positives = 52/94 (55%), Gaps = 14/94 (14%)
Query: 1474 QKKYACDV--CGKQFTSTNRVSQHKAH--SHFGIIKTIQRKFECDF--CKKKFYRNFDLQ 1527
++ + CD C K +T + S KAH +H G ++ ++C + C +F R+ +L
Sbjct: 13 RRIHYCDYPGCTKVYT---KSSHLKAHLRTHTG-----EKPYKCTWEGCDWRFARSDELT 64
Query: 1528 EHINTHTGNKPYQCQICNKSFGTRRNYRLHLKRH 1561
H HTG KP+QC +CN+SF + LH+KRH
Sbjct: 65 RHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRH 98
Score = 64.2 bits (157), Expect = 2e-12
Identities = 30/104 (28%), Positives = 46/104 (44%), Gaps = 15/104 (14%)
Query: 973 TFLEKGSLAKHMNWVHGDKCHICKV--CGAKIK--GNLQKHMLSHTGEKPFCCHI--CGK 1026
+ G + + H C C +L+ H+ +HTGEKP+ C C
Sbjct: 2 SSGSSGPDLEKR------RIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDW 55
Query: 1027 --SLKGNLKDHILKCHTGERPYKCDVCGSSFKDKWYLGVHMRKH 1068
+ L H K HTG +P++C VC SF +L +HM++H
Sbjct: 56 RFARSDELTRHYRK-HTGAKPFQCGVCNRSFSRSDHLALHMKRH 98
Score = 59.2 bits (144), Expect = 1e-10
Identities = 30/90 (33%), Positives = 45/90 (50%), Gaps = 11/90 (12%)
Query: 1508 QRKFECDF--CKKKFYRNFDLQEHINTHTGNKPYQCQI--CNKSFGTRRNYRLHLKRHKR 1563
+R CD+ C K + ++ L+ H+ THTG KPY+C C+ F R + L RH R
Sbjct: 13 RRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRF-ARSD---ELTRHYR 68
Query: 1564 SAGQLKPEDIHECKICHKIFLENSRLTRHM 1593
KP +C +C++ F + L HM
Sbjct: 69 KHTGAKP---FQCGVCNRSFSRSDHLALHM 95
Score = 58.4 bits (142), Expect = 2e-10
Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Query: 1961 GNMKRHMLSHTGEKPFCCDI--CGK--SLKGNLKAHILRCQGERPYKCDVCGSSFKDKKH 2016
++K H+ +HTGEKP+ C C + L H + G +P++C VC SF H
Sbjct: 31 SHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDH 90
Query: 2017 FSVHIRNH 2024
++H++ H
Sbjct: 91 LALHMKRH 98
Score = 57.6 bits (140), Expect = 4e-10
Identities = 30/93 (32%), Positives = 46/93 (49%), Gaps = 11/93 (11%)
Query: 597 KRYMCDI--CGKQFTTLSYLDLHRKSHNETVKRKEEDKKYEC--DSCNKKFWSKRALSEH 652
+ + CD C K +T S+L H ++H +K Y+C + C+ +F L+ H
Sbjct: 14 RIHYCDYPGCTKVYTKSSHLKAHLRTHTG-------EKPYKCTWEGCDWRFARSDELTRH 66
Query: 653 MIIHTGIKEHQCHVCNTAFYHIRSLSRHLKIHE 685
HTG K QC VCN +F L+ H+K H+
Sbjct: 67 YRKHTGAKPFQCGVCNRSFSRSDHLALHMKRHQ 99
Score = 56.1 bits (136), Expect = 1e-09
Identities = 32/90 (35%), Positives = 42/90 (46%), Gaps = 11/90 (12%)
Query: 899 ERKFECD--YCKMKFKSKSFLSEHINTHTGNKPYQCQI--CKKSFANKRSYQRDLKRHKQ 954
R CD C + S L H+ THTG KPY+C C FA RS +L RH +
Sbjct: 13 RRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFA--RSD--ELTRHYR 68
Query: 955 LAGQLKPEDIHECKICHKTFLEKGSLAKHM 984
KP +C +C+++F LA HM
Sbjct: 69 KHTGAKP---FQCGVCNRSFSRSDHLALHM 95
Score = 51.5 bits (124), Expect = 6e-08
Identities = 27/92 (29%), Positives = 46/92 (50%), Gaps = 10/92 (10%)
Query: 865 QKKYVCDM--CGKQFTSNNRVSQHKAYSHFGIIKTIERKFECDY--CKMKFKSKSFLSEH 920
++ + CD C K +T ++ + H +H G E+ ++C + C +F L+ H
Sbjct: 13 RRIHYCDYPGCTKVYTKSSHLKAHLR-THTG-----EKPYKCTWEGCDWRFARSDELTRH 66
Query: 921 INTHTGNKPYQCQICKKSFANKRSYQRDLKRH 952
HTG KP+QC +C +SF+ +KRH
Sbjct: 67 YRKHTGAKPFQCGVCNRSFSRSDHLALHMKRH 98
Score = 50.7 bits (122), Expect = 1e-07
Identities = 24/89 (26%), Positives = 35/89 (39%), Gaps = 10/89 (11%)
Query: 571 QCPICEKIFAAPKQMRMHLRHVHSSIKRYMCDI--CGKQFTTLSYLDLHRKSHNETVKRK 628
P C K++ ++ HLR H+ K Y C C +F L H + H
Sbjct: 19 DYPGCTKVYTKSSHLKAHLR-THTGEKPYKCTWEGCDWRFARSDELTRHYRKHT------ 71
Query: 629 EEDKKYECDSCNKKFWSKRALSEHMIIHT 657
K ++C CN+ F L+ HM H
Sbjct: 72 -GAKPFQCGVCNRSFSRSDHLALHMKRHQ 99
Score = 49.5 bits (119), Expect = 2e-07
Identities = 24/76 (31%), Positives = 40/76 (52%), Gaps = 8/76 (10%)
Query: 1323 QKRYLCDI--CGKQFTSTNRVNIHKACVHSSTGNK-FECIY--CKKKYRRKFDLKEHINK 1377
++ + CD C K +T ++ + H + TG K ++C + C ++ R +L H K
Sbjct: 13 RRIHYCDYPGCTKVYTKSSHLKAHL---RTHTGEKPYKCTWEGCDWRFARSDELTRHYRK 69
Query: 1378 HTGNKPYHCQICKESF 1393
HTG KP+ C +C SF
Sbjct: 70 HTGAKPFQCGVCNRSF 85
Score = 49.5 bits (119), Expect = 3e-07
Identities = 24/88 (27%), Positives = 39/88 (44%), Gaps = 9/88 (10%)
Query: 840 DCPVCHKTYSTPKSMRKHLREVHSSQKKYVCDM--CGKQFTSNNRVSQHKAYSHFGIIKT 897
D P C K Y+ ++ HLR H+ +K Y C C +F ++ +++H H G
Sbjct: 19 DYPGCTKVYTKSSHLKAHLR-THTGEKPYKCTWEGCDWRFARSDELTRHYR-KHTG---- 72
Query: 898 IERKFECDYCKMKFKSKSFLSEHINTHT 925
+ F+C C F L+ H+ H
Sbjct: 73 -AKPFQCGVCNRSFSRSDHLALHMKRHQ 99
Score = 49.2 bits (118), Expect = 4e-07
Identities = 24/87 (27%), Positives = 41/87 (47%), Gaps = 10/87 (11%)
Query: 1451 CPVCHKTYSTPRQMRIHLREAHS-QKKYAC--DVCGKQFTSTNRVSQHKAHSHFGIIKTI 1507
P C K Y+ ++ HLR H+ +K Y C + C +F ++ +++H H G
Sbjct: 20 YPGCTKVYTKSSHLKAHLR-THTGEKPYKCTWEGCDWRFARSDELTRHY-RKHTG----- 72
Query: 1508 QRKFECDFCKKKFYRNFDLQEHINTHT 1534
+ F+C C + F R+ L H+ H
Sbjct: 73 AKPFQCGVCNRSFSRSDHLALHMKRHQ 99
Score = 47.6 bits (114), Expect = 1e-06
Identities = 26/85 (30%), Positives = 43/85 (50%), Gaps = 6/85 (7%)
Query: 370 QCPLCTKIFTTAKHMRVHLRSVHNGKERKFICDI--CGKQFTSNIHASRHKNYAHSRDRQ 427
P CTK++T + H++ HLR+ H G E+ + C C +F + +RH H+ +
Sbjct: 19 DYPGCTKVYTKSSHLKAHLRT-HTG-EKPYKCTWEGCDWRFARSDELTRHYR-KHTGAK- 74
Query: 428 KMECDYCKRKFTCKRYLAEHINAHT 452
+C C R F+ +LA H+ H
Sbjct: 75 PFQCGVCNRSFSRSDHLALHMKRHQ 99
Score = 46.9 bits (112), Expect = 2e-06
Identities = 31/133 (23%), Positives = 40/133 (30%), Gaps = 41/133 (30%)
Query: 1867 KFPSKNEVTNHIKSHMGVRDILCPICKKGFIALKHMKTHLKKHMWKAGEIPLEDTYLCDL 1926
S + H P C K + H+K HL+ H GE P Y C
Sbjct: 2 SSGSSGPDLEKRRIHYCD----YPGCTKVYTKSSHLKAHLRTH---TGEKP----YKCTW 50
Query: 1927 --CSKVFLEHKDMIRHREWVHGDKCHVCKVCGAKIKGNMKRHMLSHTGEKPFCCDICGK- 1983
C F + RH HTG KPF C +C +
Sbjct: 51 EGCDWRFAR--------------------------SDELTRHYRKHTGAKPFQCGVCNRS 84
Query: 1984 -SLKGNLKAHILR 1995
S +L H+ R
Sbjct: 85 FSRSDHLALHMKR 97
Score = 46.9 bits (112), Expect = 2e-06
Identities = 26/85 (30%), Positives = 39/85 (45%), Gaps = 7/85 (8%)
Query: 1298 DCPVCHKTYSTPKTMRRHLRQVHTSQKRYLCDI--CGKQFTSTNRVNIHKACVHSSTGNK 1355
D P C K Y+ ++ HLR HT +K Y C C +F ++ + H TG K
Sbjct: 19 DYPGCTKVYTKSSHLKAHLR-THTGEKPYKCTWEGCDWRFARSDELTRHY---RKHTGAK 74
Query: 1356 -FECIYCKKKYRRKFDLKEHINKHT 1379
F+C C + + R L H+ +H
Sbjct: 75 PFQCGVCNRSFSRSDHLALHMKRHQ 99
Score = 46.5 bits (111), Expect = 3e-06
Identities = 27/138 (19%), Positives = 40/138 (28%), Gaps = 46/138 (33%)
Query: 910 KFKSKSFLSEHINTHTGNKPYQCQICKKSFANKRSYQRDLKRHKQLAGQLKPEDIHECKI 969
S E H + P
Sbjct: 2 SSGSSGPDLEKRRIHYCDYPG--------------------------------------- 22
Query: 970 CHKTFLEKGSLAKHMNWVHGDKCHIC--KVCGAKIK--GNLQKHMLSHTGEKPFCCHICG 1025
C K + + L H+ G+K + C + C + L +H HTG KPF C +C
Sbjct: 23 CTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCN 82
Query: 1026 K--SLKGNLKDHILKCHT 1041
+ S +L H+ K H
Sbjct: 83 RSFSRSDHLALHM-KRHQ 99
Score = 45.7 bits (109), Expect = 6e-06
Identities = 24/88 (27%), Positives = 41/88 (46%), Gaps = 6/88 (6%)
Query: 628 KEEDKKYECD--SCNKKFWSKRALSEHMIIHTGIKEHQCHV--CNTAFYHIRSLSRHLKI 683
E+ + + CD C K + L H+ HTG K ++C C+ F L+RH +
Sbjct: 10 LEKRRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRK 69
Query: 684 HEYNESKMYKCPVCSKMFTELYEMKRHR 711
H +K ++C VC++ F+ + H
Sbjct: 70 H--TGAKPFQCGVCNRSFSRSDHLALHM 95
Score = 43.8 bits (104), Expect = 3e-05
Identities = 26/92 (28%), Positives = 43/92 (46%), Gaps = 10/92 (10%)
Query: 1822 KKKFKCDL--CQKQFKASRSLQCHKQFVHLGVHKPKFLNMECDY--CSRKFPSKNEVTNH 1877
++ CD C K + S L+ H + H G KP +C + C +F +E+T H
Sbjct: 13 RRIHYCDYPGCTKVYTKSSHLKAHLR-THTG-EKP----YKCTWEGCDWRFARSDELTRH 66
Query: 1878 IKSHMGVRDILCPICKKGFIALKHMKTHLKKH 1909
+ H G + C +C + F H+ H+K+H
Sbjct: 67 YRKHTGAKPFQCGVCNRSFSRSDHLALHMKRH 98
Score = 42.6 bits (101), Expect = 9e-05
Identities = 21/67 (31%), Positives = 28/67 (41%), Gaps = 4/67 (5%)
Query: 1960 KGNMKRHMLSHTGEKPFCCDICGKSLKGNLKAHILRCQGERPYKC--DVCGSSFKDKKHF 2017
G H + P C + KS +LKAH+ GE+PYKC + C F
Sbjct: 6 SGPDLEKRRIHYCDYPGCTKVYTKS--SHLKAHLRTHTGEKPYKCTWEGCDWRFARSDEL 63
Query: 2018 SVHIRNH 2024
+ H R H
Sbjct: 64 TRHYRKH 70
Score = 34.9 bits (81), Expect = 0.034
Identities = 19/77 (24%), Positives = 26/77 (33%), Gaps = 13/77 (16%)
Query: 1519 KFYRNFDLQEHINTHTGNKPYQCQICNKSFGTRRNYRLHLKRHKRSAGQLKPEDIHECKI 1578
+ E H + P C K + HLK H R+ KP ++C
Sbjct: 2 SSGSSGPDLEKRRIHYCDYPG----CTKVYTKSS----HLKAHLRTHTGEKP---YKCTW 50
Query: 1579 --CHKIFLENSRLTRHM 1593
C F + LTRH
Sbjct: 51 EGCDWRFARSDELTRHY 67
Score = 33.0 bits (76), Expect = 0.16
Identities = 13/46 (28%), Positives = 20/46 (43%), Gaps = 1/46 (2%)
Query: 1799 PVCNKEYATPVTMRKHLREVHVSKKKFKCDLCQKQFKASRSLQCHK 1844
C+ +A + +H R H K F+C +C + F S L H
Sbjct: 51 EGCDWRFARSDELTRHYR-KHTGAKPFQCGVCNRSFSRSDHLALHM 95
Score = 33.0 bits (76), Expect = 0.21
Identities = 26/81 (32%), Positives = 38/81 (46%), Gaps = 11/81 (13%)
Query: 108 CTEVFENLTLLRRHMRVKHPGEQNLPCRL--CDMSFSNKYQKKKHYSAFHKGMPFIPSFT 165
CT+V+ + L+ H+R H GE+ C CD F+ + +HY H G F
Sbjct: 23 CTKVYTKSSHLKAHLR-THTGEKPYKCTWEGCDWRFARSDELTRHYRK-HTG---AKPFQ 77
Query: 166 CPICQKIFKNKEWYLDHLSLH 186
C +C + F DHL+LH
Sbjct: 78 CGVCNRSFSR----SDHLALH 94
Score = 30.3 bits (69), Expect = 1.5
Identities = 17/56 (30%), Positives = 24/56 (42%), Gaps = 5/56 (8%)
Query: 752 FHC--DTCGKYFRSRQICNKHIKRVHLNPTKTFKCDLCSDRFSTSAKLKKHVDKIH 805
+ C + C F +H R H K F+C +C+ FS S L H+ K H
Sbjct: 46 YKCTWEGCDWRFARSDELTRH-YRKHTG-AKPFQCGVCNRSFSRSDHLALHM-KRH 98
>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double
helix, transcription/DNA complex; HET: DNA; 2.80A
{Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1
Length = 66
Score = 69.1 bits (170), Expect = 1e-14
Identities = 12/61 (19%), Positives = 22/61 (36%), Gaps = 3/61 (4%)
Query: 1013 HTGEKPFCCHICGK--SLKGNLKDHIL-KCHTGERPYKCDVCGSSFKDKWYLGVHMRKHN 1069
GE + C +C + + N H + + Y C C F K + H++ +
Sbjct: 5 KEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIH 64
Query: 1070 G 1070
Sbjct: 65 K 65
Score = 66.8 bits (164), Expect = 8e-14
Identities = 15/59 (25%), Positives = 21/59 (35%), Gaps = 2/59 (3%)
Query: 1040 HTGERPYKCDVCGSSFKDKWYLGVHMR--KHNGEKPYNCDYCGQTFAARSTFTFHLKKH 1096
GE Y+C VC + H K Y C +C + F + T H+K
Sbjct: 5 KEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKII 63
Score = 61.4 bits (150), Expect = 7e-12
Identities = 12/59 (20%), Positives = 22/59 (37%), Gaps = 4/59 (6%)
Query: 1970 HTGEKPFCCDICGK--SLKGNLKAHILRCQ--GERPYKCDVCGSSFKDKKHFSVHIRNH 2024
GE + C +C + + N H + + Y C C F K + + H++
Sbjct: 5 KEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKII 63
Score = 55.3 bits (134), Expect = 1e-09
Identities = 15/69 (21%), Positives = 30/69 (43%), Gaps = 9/69 (13%)
Query: 1532 THTGNKPYQCQICNKSFGTRRNYRLHLKRHKRSAGQ--LKPEDIHECKICHKIFLENSRL 1589
T G Y+C++C++ + + + RH ++ + +K + C C K F +
Sbjct: 4 TKEGEHTYRCKVCSRVY----THISNFCRHYVTSHKRNVKV---YPCPFCFKEFTRKDNM 56
Query: 1590 TRHMNFTHG 1598
T H+ H
Sbjct: 57 TAHVKIIHK 65
Score = 53.3 bits (129), Expect = 5e-09
Identities = 19/62 (30%), Positives = 25/62 (40%)
Query: 655 IHTGIKEHQCHVCNTAFYHIRSLSRHLKIHEYNESKMYKCPVCSKMFTELYEMKRHRDHK 714
G ++C VC+ + HI + RH K+Y CP C K FT M H
Sbjct: 4 TKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKII 63
Query: 715 HG 716
H
Sbjct: 64 HK 65
Score = 52.9 bits (128), Expect = 8e-09
Identities = 12/55 (21%), Positives = 20/55 (36%), Gaps = 2/55 (3%)
Query: 1511 FECDFCKKKFYRNFDLQEH--INTHTGNKPYQCQICNKSFGTRRNYRLHLKRHKR 1563
+ C C + + + H + K Y C C K F + N H+K +
Sbjct: 11 YRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHK 65
Score = 50.2 bits (121), Expect = 7e-08
Identities = 15/69 (21%), Positives = 31/69 (44%), Gaps = 9/69 (13%)
Query: 923 THTGNKPYQCQICKKSFANKRSYQRDLKRHKQLAGQ--LKPEDIHECKICHKTFLEKGSL 980
T G Y+C++C + + ++ + RH + + +K + C C K F K ++
Sbjct: 4 TKEGEHTYRCKVCSRVY----THISNFCRHYVTSHKRNVKV---YPCPFCFKEFTRKDNM 56
Query: 981 AKHMNWVHG 989
H+ +H
Sbjct: 57 TAHVKIIHK 65
Score = 49.9 bits (120), Expect = 9e-08
Identities = 16/63 (25%), Positives = 27/63 (42%), Gaps = 5/63 (7%)
Query: 597 KRYMCDICGKQFTTLSYLDLHRKSHNETVKRKEEDKKYECDSCNKKFWSKRALSEHMIIH 656
Y C +C + +T +S H + ++ K Y C C K+F K ++ H+ I
Sbjct: 9 HTYRCKVCSRVYTHISNFCRHYVTSHKR-----NVKVYPCPFCFKEFTRKDNMTAHVKII 63
Query: 657 TGI 659
I
Sbjct: 64 HKI 66
Score = 49.1 bits (118), Expect = 2e-07
Identities = 14/63 (22%), Positives = 21/63 (33%), Gaps = 2/63 (3%)
Query: 895 IKTIERKFECDYCKMKFKSKSFLSEH--INTHTGNKPYQCQICKKSFANKRSYQRDLKRH 952
K E + C C + S H + K Y C C K F K + +K
Sbjct: 4 TKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKII 63
Query: 953 KQL 955
++
Sbjct: 64 HKI 66
Score = 47.5 bits (114), Expect = 6e-07
Identities = 15/60 (25%), Positives = 24/60 (40%), Gaps = 7/60 (11%)
Query: 989 GDKCHICKVCGA--KIKGNLQKHMLS--HTGEKPFCCHICGK--SLKGNLKDHILKCHTG 1042
G+ + CKVC N +H ++ K + C C K + K N+ H+ K
Sbjct: 7 GEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHV-KIIHK 65
Score = 45.6 bits (109), Expect = 2e-06
Identities = 12/62 (19%), Positives = 24/62 (38%), Gaps = 2/62 (3%)
Query: 1320 HTSQKRYLCDICGKQFTSTNRVNIHKACVHSSTGNK-FECIYCKKKYRRKFDLKEHINKH 1378
+ Y C +C + +T + H K + C +C K++ RK ++ H+
Sbjct: 5 KEGEHTYRCKVCSRVYTHISNFCRHYV-TSHKRNVKVYPCPFCFKEFTRKDNMTAHVKII 63
Query: 1379 TG 1380
Sbjct: 64 HK 65
Score = 45.6 bits (109), Expect = 3e-06
Identities = 12/54 (22%), Positives = 23/54 (42%), Gaps = 1/54 (1%)
Query: 571 QCPICEKIFAAPKQMRMHLR-HVHSSIKRYMCDICGKQFTTLSYLDLHRKSHNE 623
+C +C +++ H ++K Y C C K+FT + H K ++
Sbjct: 12 RCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHK 65
Score = 44.9 bits (107), Expect = 5e-06
Identities = 11/49 (22%), Positives = 24/49 (48%)
Query: 370 QCPLCTKIFTTAKHMRVHLRSVHNGKERKFICDICGKQFTSNIHASRHK 418
+C +C++++T + H + H + + C C K+FT + + H
Sbjct: 12 RCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHV 60
Score = 44.5 bits (106), Expect = 8e-06
Identities = 11/56 (19%), Positives = 21/56 (37%), Gaps = 2/56 (3%)
Query: 631 DKKYECDSCNKKFWSKRALSEHM--IIHTGIKEHQCHVCNTAFYHIRSLSRHLKIH 684
+ Y C C++ + H +K + C C F +++ H+KI
Sbjct: 8 EHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKII 63
Score = 44.1 bits (105), Expect = 9e-06
Identities = 13/62 (20%), Positives = 23/62 (37%), Gaps = 6/62 (9%)
Query: 1475 KKYACDVCGKQFTSTNRVSQHK-AHSHFGIIKTIQRKFECDFCKKKFYRNFDLQEHINTH 1533
Y C VC + +T + +H + + C FC K+F R ++ H+
Sbjct: 9 HTYRCKVCSRVYTHISNFCRHYVTSHKRN-----VKVYPCPFCFKEFTRKDNMTAHVKII 63
Query: 1534 TG 1535
Sbjct: 64 HK 65
Score = 44.1 bits (105), Expect = 1e-05
Identities = 12/59 (20%), Positives = 20/59 (33%), Gaps = 7/59 (11%)
Query: 1352 TGNK-FECIYCKKKYRRKFDLKEH--INKHTGNKPYHCQICKESFYTLKTYRGDLKRHE 1407
G + C C + Y + H + K Y C C + F T + ++ H
Sbjct: 6 EGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEF----TRKDNMTAHV 60
Score = 42.9 bits (102), Expect = 2e-05
Identities = 18/79 (22%), Positives = 27/79 (34%), Gaps = 30/79 (37%)
Query: 1919 EDTYLCDLCSKVFLEHKDMIRHREWVHGDKCHVCKVCGAKIKGNMKRHMLS--HTGEKPF 1976
E TY C +CS+V+ N RH ++ K +
Sbjct: 8 EHTYRCKVCSRVY--------------------------THISNFCRHYVTSHKRNVKVY 41
Query: 1977 CCDICGK--SLKGNLKAHI 1993
C C K + K N+ AH+
Sbjct: 42 PCPFCFKEFTRKDNMTAHV 60
Score = 42.9 bits (102), Expect = 2e-05
Identities = 13/65 (20%), Positives = 26/65 (40%), Gaps = 4/65 (6%)
Query: 862 HSSQKKYVCDMCGKQFTSNNRVSQHKAYSHFGIIKTIERKFECDYCKMKFKSKSFLSEHI 921
+ Y C +C + +T + +H SH K + + C +C +F K ++ H+
Sbjct: 5 KEGEHTYRCKVCSRVYTHISNFCRHYVTSH----KRNVKVYPCPFCFKEFTRKDNMTAHV 60
Query: 922 NTHTG 926
Sbjct: 61 KIIHK 65
Score = 40.2 bits (95), Expect = 2e-04
Identities = 14/48 (29%), Positives = 20/48 (41%), Gaps = 1/48 (2%)
Query: 1299 CPVCHKTYSTPKTMRRHLR-QVHTSQKRYLCDICGKQFTSTNRVNIHK 1345
C VC + Y+ RH + K Y C C K+FT + + H
Sbjct: 13 CKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHV 60
Score = 39.8 bits (94), Expect = 3e-04
Identities = 15/62 (24%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Query: 392 HNGKERKFICDICGKQFTSNIHASRHKNYAHSRDRQKMECDYCKRKFTCKRYLAEHINAH 451
G E + C +C + +T + RH +H R+ + C +C ++FT K + H+
Sbjct: 5 KEG-EHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKII 63
Query: 452 TG 453
Sbjct: 64 HK 65
Score = 39.5 bits (93), Expect = 4e-04
Identities = 12/66 (18%), Positives = 26/66 (39%), Gaps = 4/66 (6%)
Query: 1819 HVSKKKFKCDLCQKQFKASRSLQCHKQFVHLGVHKPKFLNMECDYCSRKFPSKNEVTNHI 1878
+ ++C +C + + + H H K C +C ++F K+ +T H+
Sbjct: 5 KEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKV----YPCPFCFKEFTRKDNMTAHV 60
Query: 1879 KSHMGV 1884
K +
Sbjct: 61 KIIHKI 66
Score = 38.7 bits (91), Expect = 7e-04
Identities = 12/54 (22%), Positives = 19/54 (35%), Gaps = 1/54 (1%)
Query: 752 FHCDTCGKYFRSRQICNKHIKRVHLNPTKTFKCDLCSDRFSTSAKLKKHVDKIH 805
+ C C + + +H H K + C C F+ + HV KI
Sbjct: 11 YRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHV-KII 63
Score = 38.7 bits (91), Expect = 7e-04
Identities = 13/48 (27%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Query: 841 CPVCHKTYSTPKSMRKHLR-EVHSSQKKYVCDMCGKQFTSNNRVSQHK 887
C VC + Y+ + +H + K Y C C K+FT + ++ H
Sbjct: 13 CKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHV 60
Score = 36.8 bits (86), Expect = 0.003
Identities = 7/32 (21%), Positives = 11/32 (34%), Gaps = 4/32 (12%)
Query: 1066 RKHNGEKPYNCDYCGQTFAARSTFTFHLKKHE 1097
GE Y C C + + S + +H
Sbjct: 3 FTKEGEHTYRCKVCSRVYTHIS----NFCRHY 30
Score = 36.4 bits (85), Expect = 0.004
Identities = 14/49 (28%), Positives = 22/49 (44%), Gaps = 2/49 (4%)
Query: 1450 KCPVCHKTYSTPRQMRIHLREAHS--QKKYACDVCGKQFTSTNRVSQHK 1496
+C VC + Y+ H +H K Y C C K+FT + ++ H
Sbjct: 12 RCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHV 60
Score = 36.4 bits (85), Expect = 0.005
Identities = 14/57 (24%), Positives = 24/57 (42%), Gaps = 1/57 (1%)
Query: 1793 EKTKLCPVCNKEYATPVTMRKHLR-EVHVSKKKFKCDLCQKQFKASRSLQCHKQFVH 1848
E T C VC++ Y +H + K + C C K+F ++ H + +H
Sbjct: 8 EHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIH 64
Score = 36.0 bits (84), Expect = 0.008
Identities = 13/55 (23%), Positives = 22/55 (40%)
Query: 256 FTCDTCDKPFDTIEKCRRHAIRMHMNPCKMFKCDICVASFLTPHKLKTHIKTKHR 310
+ C C + + I RH + H K++ C C F + H+K H+
Sbjct: 11 YRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHK 65
Score = 35.6 bits (83), Expect = 0.011
Identities = 14/52 (26%), Positives = 19/52 (36%), Gaps = 2/52 (3%)
Query: 1860 ECDYCSRKFPSKNEVTNH--IKSHMGVRDILCPICKKGFIALKHMKTHLKKH 1909
C CSR + + H V+ CP C K F +M H+K
Sbjct: 12 RCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKII 63
Score = 34.1 bits (79), Expect = 0.030
Identities = 11/60 (18%), Positives = 23/60 (38%), Gaps = 3/60 (5%)
Query: 284 KMFKCDICVASFLTPHKLKTHIKTKHRTQLKELYTFECQHCEDKFSTPFELNKHNESKHE 343
++C +C + H T H+ +K + C C +F+ + H + H+
Sbjct: 9 HTYRCKVCSRVYTHISNFCRHYVTSHKRNVK---VYPCPFCFKEFTRKDNMTAHVKIIHK 65
Score = 33.3 bits (77), Expect = 0.060
Identities = 13/54 (24%), Positives = 19/54 (35%), Gaps = 2/54 (3%)
Query: 430 ECDYCKRKFTCKRYLAEH--INAHTGNTIYGCRICKKTFLYTNGLRRHILSRHK 481
C C R +T H + +Y C C K F + + H+ HK
Sbjct: 12 RCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHK 65
Score = 32.5 bits (75), Expect = 0.12
Identities = 14/92 (15%), Positives = 26/92 (28%), Gaps = 35/92 (38%)
Query: 1378 HTGNKPYHCQICKESFYTLKTYRGDLKRHEQLAEQSDEMHSTSKFQNKIKKPLDTGDLSW 1437
G Y C++C + T+ + RH + + + K
Sbjct: 5 KEGEHTYRCKVCSRVY----THISNFCRHYVTSHKRNV------------KVY------- 41
Query: 1438 EEWNELVLSGTKKCPVCHKTYSTPRQMRIHLR 1469
CP C K ++ M H++
Sbjct: 42 ------------PCPFCFKEFTRKDNMTAHVK 61
Score = 30.2 bits (69), Expect = 0.84
Identities = 12/58 (20%), Positives = 20/58 (34%), Gaps = 5/58 (8%)
Query: 1889 CPICKKGFIALKHMKTHLKKHMWKAGEIPLEDTYLCDLCSKVFLEHKDMIRHREWVHG 1946
C +C + + + + H K Y C C K F +M H + +H
Sbjct: 13 CKVCSRVYTHISNFCRHYVTSH-KRNVKV----YPCPFCFKEFTRKDNMTAHVKIIHK 65
Score = 29.8 bits (68), Expect = 1.0
Identities = 11/48 (22%), Positives = 20/48 (41%), Gaps = 1/48 (2%)
Query: 104 TCRICTEVFENLTLLRRHMRVK-HPGEQNLPCRLCDMSFSNKYQKKKH 150
C++C+ V+ +++ RH + PC C F+ K H
Sbjct: 12 RCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAH 59
Score = 29.8 bits (68), Expect = 1.1
Identities = 13/77 (16%), Positives = 29/77 (37%), Gaps = 17/77 (22%)
Query: 451 HTGNTIYGCRICKKTFLYTNGLRRHILSRHKDTDVVILNEVKDIFPSHLQSYQIKCRYCA 510
G Y C++C + + + + RH ++ H C +C
Sbjct: 5 KEGEHTYRCKVCSRVYTHISNFCRHYVTSH-----------------KRNVKVYPCPFCF 47
Query: 511 RTFSTQNDLKEHVSSVH 527
+ F+ ++++ HV +H
Sbjct: 48 KEFTRKDNMTAHVKIIH 64
Score = 29.8 bits (68), Expect = 1.2
Identities = 16/87 (18%), Positives = 25/87 (28%), Gaps = 32/87 (36%)
Query: 690 KMYKCPVCSKMFTELYEMKRH-RDHKHGGKCHVCKICGATIKLFTELEEKEDSSFERKKS 748
Y+C VCS+++T + RH K
Sbjct: 9 HTYRCKVCSRVYTHISNFCRHYVTSHKRN-------------------VK---------- 39
Query: 749 KDSFHCDTCGKYFRSRQICNKHIKRVH 775
+ C C K F + H+K +H
Sbjct: 40 --VYPCPFCFKEFTRKDNMTAHVKIIH 64
Score = 28.7 bits (65), Expect = 2.9
Identities = 14/64 (21%), Positives = 28/64 (43%), Gaps = 10/64 (15%)
Query: 126 HPGEQNLPCRLCDMSFSNKYQKKKHY-SAFHKGM-PFIPSFTCPICQKIFKNKEWYLDHL 183
GE C++C +++ +HY ++ + + + CP C K F K D++
Sbjct: 5 KEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVY----PCPFCFKEFTRK----DNM 56
Query: 184 SLHE 187
+ H
Sbjct: 57 TAHV 60
Score = 28.7 bits (65), Expect = 3.1
Identities = 15/74 (20%), Positives = 27/74 (36%), Gaps = 20/74 (27%)
Query: 319 FECQHCEDKFSTPFELNKHNESKHEKGRKLNPETGGYTYEEYKEVVVSKSKQCPLCTKIF 378
+ C+ C ++ +H + H++ K Y CP C K F
Sbjct: 11 YRCKVCSRVYTHISNFCRHYVTSHKRNVK--------VYP------------CPFCFKEF 50
Query: 379 TTAKHMRVHLRSVH 392
T +M H++ +H
Sbjct: 51 TRKDNMTAHVKIIH 64
Score = 28.7 bits (65), Expect = 3.3
Identities = 13/94 (13%), Positives = 29/94 (30%), Gaps = 32/94 (34%)
Query: 771 IKRVHLNPTKTFKCDLCSDRFSTSAKLKKHVDKIHFTPE--FQEPSKKNEPLDTGDYTLE 828
++ T++C +CS ++ + +H H +
Sbjct: 1 MEFTK-EGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYP----------------- 42
Query: 829 QWNELVTAQSKDCPVCHKTYSTPKSMRKHLREVH 862
CP C K ++ +M H++ +H
Sbjct: 43 ------------CPFCFKEFTRKDNMTAHVKIIH 64
>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc
finger domain, structural genomics, NPPSFA; NMR {Homo
sapiens} SCOP: g.37.1.1
Length = 54
Score = 64.1 bits (157), Expect = 5e-13
Identities = 20/48 (41%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Query: 1012 SHTGEKPFCCHICGK--SLKGNLKDHILKCHTGERPYKCDVCGSSFKD 1057
S + KP+ C CGK S +L HI + HT ERP+KC V S
Sbjct: 6 SGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS 53
Score = 63.0 bits (154), Expect = 1e-12
Identities = 12/46 (26%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Query: 1040 HTGERPYKCDVCGSSFKDKWYLGVHMRK-HNGEKPYNCDYCGQTFA 1084
+ +PY C CG F +L H+++ H E+P+ C +
Sbjct: 7 GSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPS 52
Score = 54.5 bits (132), Expect = 1e-09
Identities = 18/48 (37%), Positives = 23/48 (47%), Gaps = 3/48 (6%)
Query: 1969 SHTGEKPFCCDICGK--SLKGNLKAHILRCQ-GERPYKCDVCGSSFKD 2013
S + KP+ C CGK S +L HI + ERP+KC V S
Sbjct: 6 SGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS 53
Score = 46.8 bits (112), Expect = 7e-07
Identities = 11/46 (23%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Query: 897 TIERKFECDYCKMKFKSKSFLSEHI-NTHTGNKPYQCQICKKSFAN 941
++ + + C C F L+ HI HT +P++CQ+ ++
Sbjct: 8 SVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS 53
Score = 46.0 bits (110), Expect = 1e-06
Identities = 13/41 (31%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Query: 1511 FECDFCKKKFYRNFDLQEHI-NTHTGNKPYQCQICNKSFGT 1550
+ C C K F R L HI HT +P++CQ+ +
Sbjct: 13 YICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS 53
Score = 43.3 bits (103), Expect = 1e-05
Identities = 13/39 (33%), Positives = 22/39 (56%)
Query: 1299 CPVCHKTYSTPKTMRRHLRQVHTSQKRYLCDICGKQFTS 1337
C C K +S P + H++QVHTS++ + C + +S
Sbjct: 15 CQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS 53
Score = 41.8 bits (99), Expect = 5e-05
Identities = 12/40 (30%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Query: 371 CPLCTKIFTTAKHMRVHLRSVHNGKERKFICDICGKQFTS 410
C C K F+ H+ H++ VH ER C + +S
Sbjct: 15 CQSCGKGFSRPDHLNGHIKQVHTS-ERPHKCQVWVSGPSS 53
Score = 41.4 bits (98), Expect = 7e-05
Identities = 11/39 (28%), Positives = 22/39 (56%)
Query: 841 CPVCHKTYSTPKSMRKHLREVHSSQKKYVCDMCGKQFTS 879
C C K +S P + H+++VH+S++ + C + +S
Sbjct: 15 CQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS 53
Score = 41.0 bits (97), Expect = 1e-04
Identities = 14/57 (24%), Positives = 24/57 (42%), Gaps = 10/57 (17%)
Query: 1529 HINTHTGNKPYQCQICNKSFGTRRNYRLHLKRHKRSA--GQLKPEDIHECKICHKIF 1583
++ + KPY CQ C K F + HL H + + +P H+C++
Sbjct: 3 SGSSGSVGKPYICQSCGKGF----SRPDHLNGHIKQVHTSE-RP---HKCQVWVSGP 51
Score = 39.5 bits (93), Expect = 3e-04
Identities = 13/44 (29%), Positives = 20/44 (45%), Gaps = 2/44 (4%)
Query: 1352 TGNK-FECIYCKKKYRRKFDLKEHINK-HTGNKPYHCQICKESF 1393
+ K + C C K + R L HI + HT +P+ CQ+
Sbjct: 8 SVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGP 51
Score = 38.3 bits (90), Expect = 7e-04
Identities = 10/34 (29%), Positives = 15/34 (44%)
Query: 1062 GVHMRKHNGEKPYNCDYCGQTFAARSTFTFHLKK 1095
G + KPY C CG+ F+ H+K+
Sbjct: 1 GSSGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQ 34
Score = 38.3 bits (90), Expect = 9e-04
Identities = 14/43 (32%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Query: 630 EDKKYECDSCNKKFWSKRALSEHM-IIHTGIKEHQCHVCNTAF 671
K Y C SC K F L+ H+ +HT + H+C V +
Sbjct: 9 VGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGP 51
Score = 37.9 bits (89), Expect = 0.001
Identities = 10/40 (25%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Query: 1450 KCPVCHKTYSTPRQMRIHLREAHS-QKKYACDVCGKQFTS 1488
C C K +S P + H+++ H+ ++ + C V +S
Sbjct: 14 ICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS 53
Score = 37.6 bits (88), Expect = 0.001
Identities = 10/39 (25%), Positives = 20/39 (51%)
Query: 572 CPICEKIFAAPKQMRMHLRHVHSSIKRYMCDICGKQFTT 610
C C K F+ P + H++ VH+S + + C + ++
Sbjct: 15 CQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS 53
Score = 37.6 bits (88), Expect = 0.001
Identities = 14/57 (24%), Positives = 23/57 (40%), Gaps = 10/57 (17%)
Query: 920 HINTHTGNKPYQCQICKKSFANKRSYQRDLKRHKQLA--GQLKPEDIHECKICHKTF 974
++ + KPY CQ C K F S L H + + +P H+C++
Sbjct: 3 SGSSGSVGKPYICQSCGKGF----SRPDHLNGHIKQVHTSE-RP---HKCQVWVSGP 51
Score = 37.2 bits (87), Expect = 0.002
Identities = 13/53 (24%), Positives = 21/53 (39%), Gaps = 8/53 (15%)
Query: 592 VHSSIKRYMCDICGKQFTTLSYLDLHRKS-HNETVKRKEEDKKYECDSCNKKF 643
S K Y+C CGK F+ +L+ H K H ++ ++C
Sbjct: 6 SGSVGKPYICQSCGKGFSRPDHLNGHIKQVHT-------SERPHKCQVWVSGP 51
Score = 36.4 bits (85), Expect = 0.004
Identities = 10/42 (23%), Positives = 18/42 (42%), Gaps = 3/42 (7%)
Query: 1946 GDKCHVCKVCGA--KIKGNMKRHMLS-HTGEKPFCCDICGKS 1984
K ++C+ CG ++ H+ HT E+P C +
Sbjct: 9 VGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSG 50
Score = 36.4 bits (85), Expect = 0.004
Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 5/44 (11%)
Query: 752 FHCDTCGKYFRSRQICNKHIKRVHLNPT--KTFKCDLCSDRFST 793
+ C +CGK F N HIK+VH T + KC + S+
Sbjct: 13 YICQSCGKGFSRPDHLNGHIKQVH---TSERPHKCQVWVSGPSS 53
Score = 36.4 bits (85), Expect = 0.004
Identities = 11/49 (22%), Positives = 19/49 (38%), Gaps = 3/49 (6%)
Query: 655 IHTGIKEHQCHVCNTAFYHIRSLSRHLK-IHEYNESKMYKCPVCSKMFT 702
+ K + C C F L+ H+K +H + +KC V +
Sbjct: 6 SGSVGKPYICQSCGKGFSRPDHLNGHIKQVH--TSERPHKCQVWVSGPS 52
Score = 35.6 bits (83), Expect = 0.006
Identities = 9/25 (36%), Positives = 12/25 (48%)
Query: 1998 GERPYKCDVCGSSFKDKKHFSVHIR 2022
+PY C CG F H + HI+
Sbjct: 9 VGKPYICQSCGKGFSRPDHLNGHIK 33
Score = 34.9 bits (81), Expect = 0.014
Identities = 12/53 (22%), Positives = 16/53 (30%), Gaps = 5/53 (9%)
Query: 1818 VHVSKKKFKCDLCQKQFKASRSLQCHKQFVHLGVHKPKFLNMECDYCSRKFPS 1870
K + C C K F L H + VH +P +C S
Sbjct: 6 SGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTS-ERP----HKCQVWVSGPSS 53
Score = 33.7 bits (78), Expect = 0.037
Identities = 10/37 (27%), Positives = 19/37 (51%)
Query: 1798 CPVCNKEYATPVTMRKHLREVHVSKKKFKCDLCQKQF 1834
C C K ++ P + H+++VH S++ KC +
Sbjct: 15 CQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGP 51
Score = 32.2 bits (74), Expect = 0.12
Identities = 12/63 (19%), Positives = 17/63 (26%), Gaps = 25/63 (39%)
Query: 965 HECKICHKTFLEKGSLAKHMNWVHGDKCHICKVCGAKIKGNLQKHMLSHTGEKPFCCHIC 1024
+ C+ C K F L H+ V HT E+P C +
Sbjct: 13 YICQSCGKGFSRPDHLNGHIKQV-------------------------HTSERPHKCQVW 47
Query: 1025 GKS 1027
Sbjct: 48 VSG 50
Score = 31.4 bits (72), Expect = 0.24
Identities = 12/50 (24%), Positives = 21/50 (42%), Gaps = 2/50 (4%)
Query: 390 SVHNGKERKFICDICGKQFTSNIHASRHKNYAHSRDRQKMECDYCKRKFT 439
S + + +IC CGK F+ H + H H+ +R +C +
Sbjct: 5 SSGSV-GKPYICQSCGKGFSRPDHLNGHIKQVHTSER-PHKCQVWVSGPS 52
Score = 30.2 bits (69), Expect = 0.65
Identities = 10/38 (26%), Positives = 15/38 (39%), Gaps = 1/38 (2%)
Query: 690 KMYKCPVCSKMFTELYEMKRHRDHKH-GGKCHVCKICG 726
K Y C C K F+ + H H + H C++
Sbjct: 11 KPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWV 48
Score = 30.2 bits (69), Expect = 0.67
Identities = 8/24 (33%), Positives = 13/24 (54%)
Query: 1651 FKCGICGKCYKTREKCRRHIKRIH 1674
+ C CGK + + HIK++H
Sbjct: 13 YICQSCGKGFSRPDHLNGHIKQVH 36
Score = 28.3 bits (64), Expect = 2.9
Identities = 9/31 (29%), Positives = 13/31 (41%), Gaps = 4/31 (12%)
Query: 1378 HTGNKPYHCQICKESFYTLKTYRGDLKRHEQ 1408
+ KPY CQ C + F + L H +
Sbjct: 7 GSVGKPYICQSCGKGF----SRPDHLNGHIK 33
Score = 27.2 bits (61), Expect = 6.8
Identities = 9/38 (23%), Positives = 15/38 (39%), Gaps = 1/38 (2%)
Query: 430 ECDYCKRKFTCKRYLAEHI-NAHTGNTIYGCRICKKTF 466
C C + F+ +L HI HT + C++
Sbjct: 14 ICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGP 51
Score = 26.8 bits (60), Expect = 9.4
Identities = 12/44 (27%), Positives = 17/44 (38%), Gaps = 8/44 (18%)
Query: 1889 CPICKKGFIALKHMKTHLKK-HMWKAGEIPLEDTYLCDLCSKVF 1931
C C KGF H+ H+K+ H E P + C +
Sbjct: 15 CQSCGKGFSRPDHLNGHIKQVH---TSERP----HKCQVWVSGP 51
>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens}
Length = 44
Score = 60.2 bits (147), Expect = 9e-12
Identities = 15/37 (40%), Positives = 20/37 (54%)
Query: 1040 HTGERPYKCDVCGSSFKDKWYLGVHMRKHNGEKPYNC 1076
+GE+P+ C C +F K YL VH + H EKP
Sbjct: 5 SSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGP 41
Score = 49.1 bits (118), Expect = 1e-07
Identities = 15/39 (38%), Positives = 18/39 (46%), Gaps = 3/39 (7%)
Query: 1012 SHTGEKPFCCHICGK--SLKGNLKDHILKCHTGERPYKC 1048
+GEKPF C C K S K L H + H E+P
Sbjct: 4 GSSGEKPFGCSCCEKAFSSKSYLLVH-QQTHAEEKPSGP 41
Score = 41.8 bits (99), Expect = 3e-05
Identities = 14/38 (36%), Positives = 16/38 (42%), Gaps = 2/38 (5%)
Query: 1969 SHTGEKPFCCDICGK--SLKGNLKAHILRCQGERPYKC 2004
+GEKPF C C K S K L H E+P
Sbjct: 4 GSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGP 41
Score = 41.4 bits (98), Expect = 6e-05
Identities = 14/36 (38%), Positives = 18/36 (50%)
Query: 897 TIERKFECDYCKMKFKSKSFLSEHINTHTGNKPYQC 932
+ E+ F C C+ F SKS+L H TH KP
Sbjct: 6 SGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGP 41
Score = 39.1 bits (92), Expect = 3e-04
Identities = 11/31 (35%), Positives = 12/31 (38%)
Query: 1511 FECDFCKKKFYRNFDLQEHINTHTGNKPYQC 1541
F C C+K F L H TH KP
Sbjct: 11 FGCSCCEKAFSSKSYLLVHQQTHAEEKPSGP 41
Score = 37.9 bits (89), Expect = 7e-04
Identities = 11/30 (36%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Query: 1998 GERPYKCDVCGSSFKDKKHFSVHIRNH-GE 2026
GE+P+ C C +F K + VH + H E
Sbjct: 7 GEKPFGCSCCEKAFSSKSYLLVHQQTHAEE 36
Score = 37.1 bits (87), Expect = 0.001
Identities = 10/29 (34%), Positives = 17/29 (58%)
Query: 1068 HNGEKPYNCDYCGQTFAARSTFTFHLKKH 1096
+GEKP+ C C + F+++S H + H
Sbjct: 5 SSGEKPFGCSCCEKAFSSKSYLLVHQQTH 33
Score = 35.6 bits (83), Expect = 0.005
Identities = 13/38 (34%), Positives = 16/38 (42%), Gaps = 1/38 (2%)
Query: 1350 SSTGNK-FECIYCKKKYRRKFDLKEHINKHTGNKPYHC 1386
S+G K F C C+K + K L H H KP
Sbjct: 4 GSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGP 41
Score = 35.2 bits (82), Expect = 0.008
Identities = 11/33 (33%), Positives = 12/33 (36%)
Query: 632 KKYECDSCNKKFWSKRALSEHMIIHTGIKEHQC 664
K + C C K F SK L H H K
Sbjct: 9 KPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGP 41
Score = 34.8 bits (81), Expect = 0.011
Identities = 9/32 (28%), Positives = 17/32 (53%), Gaps = 4/32 (12%)
Query: 1532 THTGNKPYQCQICNKSFGTRRNYRLHLKRHKR 1563
+G KP+ C C K+F ++ +L H++
Sbjct: 4 GSSGEKPFGCSCCEKAFSSKS----YLLVHQQ 31
Score = 33.3 bits (77), Expect = 0.036
Identities = 8/20 (40%), Positives = 14/20 (70%)
Query: 923 THTGNKPYQCQICKKSFANK 942
+G KP+ C C+K+F++K
Sbjct: 4 GSSGEKPFGCSCCEKAFSSK 23
Score = 31.4 bits (72), Expect = 0.16
Identities = 11/30 (36%), Positives = 18/30 (60%)
Query: 592 VHSSIKRYMCDICGKQFTTLSYLDLHRKSH 621
S K + C C K F++ SYL +H+++H
Sbjct: 4 GSSGEKPFGCSCCEKAFSSKSYLLVHQQTH 33
Score = 30.2 bits (69), Expect = 0.41
Identities = 11/35 (31%), Positives = 13/35 (37%), Gaps = 2/35 (5%)
Query: 989 GDKCHICKVCGA--KIKGNLQKHMLSHTGEKPFCC 1021
G+K C C K L H +H EKP
Sbjct: 7 GEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGP 41
Score = 29.4 bits (67), Expect = 0.79
Identities = 9/30 (30%), Positives = 12/30 (40%)
Query: 430 ECDYCKRKFTCKRYLAEHINAHTGNTIYGC 459
C C++ F+ K YL H H G
Sbjct: 12 GCSCCEKAFSSKSYLLVHQQTHAEEKPSGP 41
Score = 28.7 bits (65), Expect = 1.7
Identities = 11/40 (27%), Positives = 13/40 (32%), Gaps = 2/40 (5%)
Query: 655 IHTGIKEHQCHVCNTAFYHIRSLSRHLKIHEYNESKMYKC 694
+G K C C AF L H + H E K
Sbjct: 4 GSSGEKPFGCSCCEKAFSSKSYLLVHQQTH--AEEKPSGP 41
Score = 28.3 bits (64), Expect = 2.7
Identities = 10/35 (28%), Positives = 13/35 (37%), Gaps = 2/35 (5%)
Query: 1946 GDKCHVCKVCGA--KIKGNMKRHMLSHTGEKPFCC 1978
G+K C C K + H +H EKP
Sbjct: 7 GEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGP 41
Score = 26.7 bits (60), Expect = 7.2
Identities = 6/16 (37%), Positives = 11/16 (68%)
Query: 1378 HTGNKPYHCQICKESF 1393
+G KP+ C C+++F
Sbjct: 5 SSGEKPFGCSCCEKAF 20
>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens}
Length = 42
Score = 59.8 bits (146), Expect = 1e-11
Identities = 14/35 (40%), Positives = 20/35 (57%)
Query: 1040 HTGERPYKCDVCGSSFKDKWYLGVHMRKHNGEKPY 1074
GE+PY C++CG+ F+ L H+R H G P
Sbjct: 6 SGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPS 40
Score = 54.0 bits (131), Expect = 1e-09
Identities = 16/40 (40%), Positives = 19/40 (47%), Gaps = 3/40 (7%)
Query: 1009 HMLSHTGEKPFCCHICGKSL--KGNLKDHILKCHTGERPY 1046
S GEKP+ C ICG LK H+ + HTG P
Sbjct: 2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHL-RIHTGSGPS 40
Score = 47.9 bits (115), Expect = 2e-07
Identities = 14/39 (35%), Positives = 18/39 (46%), Gaps = 2/39 (5%)
Query: 1966 HMLSHTGEKPFCCDICGKSL--KGNLKAHILRCQGERPY 2002
S GEKP+ C+ICG LK+H+ G P
Sbjct: 2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPS 40
Score = 42.9 bits (102), Expect = 1e-05
Identities = 12/35 (34%), Positives = 15/35 (42%), Gaps = 4/35 (11%)
Query: 1529 HINTHTGNKPYQCQICNKSFGTRRNYRLHLKRHKR 1563
+ G KPY C+IC F + LK H R
Sbjct: 2 SSGSSGGEKPYPCEICGTRF----RHLQTLKSHLR 32
Score = 42.5 bits (101), Expect = 2e-05
Identities = 13/33 (39%), Positives = 15/33 (45%)
Query: 1064 HMRKHNGEKPYNCDYCGQTFAARSTFTFHLKKH 1096
GEKPY C+ CG F T HL+ H
Sbjct: 2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIH 34
Score = 41.3 bits (98), Expect = 6e-05
Identities = 12/30 (40%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Query: 1998 GERPYKCDVCGSSFKDKKHFSVHIRNH-GE 2026
GE+PY C++CG+ F+ + H+R H G
Sbjct: 8 GEKPYPCEICGTRFRHLQTLKSHLRIHTGS 37
Score = 39.8 bits (94), Expect = 2e-04
Identities = 11/33 (33%), Positives = 15/33 (45%), Gaps = 4/33 (12%)
Query: 920 HINTHTGNKPYQCQICKKSFANKRSYQRDLKRH 952
+ G KPY C+IC F + + LK H
Sbjct: 2 SSGSSGGEKPYPCEICGTRF----RHLQTLKSH 30
Score = 38.2 bits (90), Expect = 6e-04
Identities = 10/34 (29%), Positives = 17/34 (50%)
Query: 897 TIERKFECDYCKMKFKSKSFLSEHINTHTGNKPY 930
E+ + C+ C +F+ L H+ HTG+ P
Sbjct: 7 GGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPS 40
Score = 38.2 bits (90), Expect = 7e-04
Identities = 9/29 (31%), Positives = 15/29 (51%)
Query: 1511 FECDFCKKKFYRNFDLQEHINTHTGNKPY 1539
+ C+ C +F L+ H+ HTG+ P
Sbjct: 12 YPCEICGTRFRHLQTLKSHLRIHTGSGPS 40
Score = 37.1 bits (87), Expect = 0.002
Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Query: 1350 SSTGNK-FECIYCKKKYRRKFDLKEHINKHTGNKPY 1384
SS G K + C C ++R LK H+ HTG+ P
Sbjct: 5 SSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPS 40
Score = 35.9 bits (84), Expect = 0.004
Identities = 11/33 (33%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
Query: 1946 GDKCHVCKVCGAKI--KGNMKRHMLSHTGEKPF 1976
G+K + C++CG + +K H+ HTG P
Sbjct: 8 GEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPS 40
Score = 35.6 bits (83), Expect = 0.005
Identities = 12/33 (36%), Positives = 18/33 (54%)
Query: 652 HMIIHTGIKEHQCHVCNTAFYHIRSLSRHLKIH 684
G K + C +C T F H+++L HL+IH
Sbjct: 2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIH 34
Score = 35.2 bits (82), Expect = 0.007
Identities = 11/33 (33%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
Query: 989 GDKCHICKVCGAKI--KGNLQKHMLSHTGEKPF 1019
G+K + C++CG + L+ H+ HTG P
Sbjct: 8 GEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPS 40
Score = 34.0 bits (79), Expect = 0.023
Identities = 11/29 (37%), Positives = 15/29 (51%)
Query: 632 KKYECDSCNKKFWSKRALSEHMIIHTGIK 660
K Y C+ C +F + L H+ IHTG
Sbjct: 10 KPYPCEICGTRFRHLQTLKSHLRIHTGSG 38
Score = 32.9 bits (76), Expect = 0.044
Identities = 11/33 (33%), Positives = 13/33 (39%), Gaps = 4/33 (12%)
Query: 1374 HINKHTGNKPYHCQICKESFYTLKTYRGDLKRH 1406
G KPY C+IC F + LK H
Sbjct: 2 SSGSSGGEKPYPCEICGTRF----RHLQTLKSH 30
Score = 32.1 bits (74), Expect = 0.092
Identities = 11/29 (37%), Positives = 14/29 (48%)
Query: 593 HSSIKRYMCDICGKQFTTLSYLDLHRKSH 621
K Y C+ICG +F L L H + H
Sbjct: 6 SGGEKPYPCEICGTRFRHLQTLKSHLRIH 34
Score = 27.5 bits (62), Expect = 3.9
Identities = 10/25 (40%), Positives = 12/25 (48%), Gaps = 1/25 (4%)
Query: 690 KMYKCPVCSKMFTELYEMKRH-RDH 713
K Y C +C F L +K H R H
Sbjct: 10 KPYPCEICGTRFRHLQTLKSHLRIH 34
Score = 27.5 bits (62), Expect = 4.2
Identities = 10/26 (38%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
Query: 780 KTFKCDLCSDRFSTSAKLKKHVDKIH 805
K + C++C RF LK H+ +IH
Sbjct: 10 KPYPCEICGTRFRHLQTLKSHL-RIH 34
>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 59.8 bits (146), Expect = 2e-11
Identities = 17/38 (44%), Positives = 21/38 (55%)
Query: 1040 HTGERPYKCDVCGSSFKDKWYLGVHMRKHNGEKPYNCD 1077
TGE+P+KCD+CG SF + L H H EKP
Sbjct: 7 GTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPS 44
Score = 44.8 bits (107), Expect = 3e-06
Identities = 14/35 (40%), Positives = 17/35 (48%)
Query: 1062 GVHMRKHNGEKPYNCDYCGQTFAARSTFTFHLKKH 1096
G GEKP+ CD CG++F RS H H
Sbjct: 1 GSSGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVH 35
Score = 43.6 bits (104), Expect = 9e-06
Identities = 17/44 (38%), Positives = 21/44 (47%), Gaps = 6/44 (13%)
Query: 1966 HMLSHTGEKPFCCDICGKSLKGNLKAHILRCQ----GERPYKCD 2005
S TGEKPF CDICGKS ++ + R E+P
Sbjct: 3 SGSSGTGEKPFKCDICGKSF--CGRSRLNRHSMVHTAEKPSGPS 44
Score = 40.9 bits (97), Expect = 8e-05
Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 4/35 (11%)
Query: 1529 HINTHTGNKPYQCQICNKSFGTRRNYRLHLKRHKR 1563
++ TG KP++C IC KSF R L RH
Sbjct: 3 SGSSGTGEKPFKCDICGKSF----CGRSRLNRHSM 33
Score = 38.2 bits (90), Expect = 6e-04
Identities = 14/38 (36%), Positives = 18/38 (47%)
Query: 895 IKTIERKFECDYCKMKFKSKSFLSEHINTHTGNKPYQC 932
T E+ F+CD C F +S L+ H HT KP
Sbjct: 6 SGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGP 43
Score = 37.9 bits (89), Expect = 8e-04
Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Query: 1998 GERPYKCDVCGSSFKDKKHFSVHIRNH-GE 2026
GE+P+KCD+CG SF + + H H E
Sbjct: 9 GEKPFKCDICGKSFCGRSRLNRHSMVHTAE 38
Score = 37.1 bits (87), Expect = 0.002
Identities = 12/31 (38%), Positives = 13/31 (41%)
Query: 1511 FECDFCKKKFYRNFDLQEHINTHTGNKPYQC 1541
F+CD C K F L H HT KP
Sbjct: 13 FKCDICGKSFCGRSRLNRHSMVHTAEKPSGP 43
Score = 35.5 bits (83), Expect = 0.007
Identities = 11/33 (33%), Positives = 17/33 (51%)
Query: 632 KKYECDSCNKKFWSKRALSEHMIIHTGIKEHQC 664
K ++CD C K F + L+ H ++HT K
Sbjct: 11 KPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGP 43
Score = 34.8 bits (81), Expect = 0.010
Identities = 15/34 (44%), Positives = 19/34 (55%), Gaps = 4/34 (11%)
Query: 920 HINTHTGNKPYQCQICKKSFANKRSYQRDLKRHK 953
++ TG KP++C IC KSF RS L RH
Sbjct: 3 SGSSGTGEKPFKCDICGKSF-CGRSR---LNRHS 32
Score = 34.0 bits (79), Expect = 0.019
Identities = 12/35 (34%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
Query: 989 GDKCHICKVCGA--KIKGNLQKHMLSHTGEKPFCC 1021
G+K C +CG + L +H + HT EKP
Sbjct: 9 GEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGP 43
Score = 34.0 bits (79), Expect = 0.022
Identities = 12/45 (26%), Positives = 17/45 (37%), Gaps = 6/45 (13%)
Query: 652 HMIIHTGIKEHQCHVCNTAFYHIRSLSRHLKIH--EYNESKMYKC 694
TG K +C +C +F L+RH +H E K
Sbjct: 3 SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAE----KPSGP 43
Score = 33.6 bits (78), Expect = 0.033
Identities = 13/36 (36%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
Query: 1352 TGNK-FECIYCKKKYRRKFDLKEHINKHTGNKPYHC 1386
TG K F+C C K + + L H HT KP
Sbjct: 8 TGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGP 43
Score = 32.8 bits (76), Expect = 0.063
Identities = 12/36 (33%), Positives = 17/36 (47%), Gaps = 2/36 (5%)
Query: 1946 GDKCHVCKVCGA--KIKGNMKRHMLSHTGEKPFCCD 1979
G+K C +CG + + RH + HT EKP
Sbjct: 9 GEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPS 44
Score = 30.9 bits (71), Expect = 0.29
Identities = 14/51 (27%), Positives = 18/51 (35%), Gaps = 8/51 (15%)
Query: 588 HLRHVHSSIKRYMCDICGKQFTTLSYLDLHRKSHNETVKRKEEDKKYECDS 638
+ K + CDICGK F S L+ H H +K S
Sbjct: 3 SGS-SGTGEKPFKCDICGKSFCGRSRLNRHSMVHT-------AEKPSGPSS 45
Score = 28.6 bits (65), Expect = 1.7
Identities = 13/30 (43%), Positives = 15/30 (50%), Gaps = 4/30 (13%)
Query: 1378 HTGNKPYHCQICKESFYTLKTYRGDLKRHE 1407
TG KP+ C IC +SF R L RH
Sbjct: 7 GTGEKPFKCDICGKSF----CGRSRLNRHS 32
Score = 27.5 bits (62), Expect = 4.2
Identities = 12/33 (36%), Positives = 14/33 (42%), Gaps = 2/33 (6%)
Query: 386 VHLRSVHNGKERKFICDICGKQFTSNIHASRHK 418
G E+ F CDICGK F +RH
Sbjct: 2 SSGS-SGTG-EKPFKCDICGKSFCGRSRLNRHS 32
>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces
cerevisiae} SCOP: g.37.1.1 g.37.1.1
Length = 60
Score = 60.2 bits (147), Expect = 2e-11
Identities = 19/52 (36%), Positives = 26/52 (50%)
Query: 1044 RPYKCDVCGSSFKDKWYLGVHMRKHNGEKPYNCDYCGQTFAARSTFTFHLKK 1095
R + C+VC +F + +L H R H EKPY C C + F R H +K
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQK 52
Score = 54.8 bits (133), Expect = 1e-09
Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 4/59 (6%)
Query: 1017 KPFCCHICGK--SLKGNLKDHILKCHTGERPYKCDVCGSSFKDKWYLGVHMRK-HNGEK 1072
+ F C +C + + + +LK H + HT E+PY C +C +F + L H +K H+G
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHY-RSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGNL 58
Score = 53.3 bits (129), Expect = 4e-09
Identities = 20/53 (37%), Positives = 28/53 (52%), Gaps = 4/53 (7%)
Query: 1511 FECDFCKKKFYRNFDLQEHINTHTGNKPYQCQICNKSFGTRRNYRLHLKRHKR 1563
F C+ C + F R L+ H +HT KPY C +CN++F R L RH +
Sbjct: 3 FVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAF----TRRDLLIRHAQ 51
Score = 50.6 bits (122), Expect = 4e-08
Identities = 18/58 (31%), Positives = 32/58 (55%), Gaps = 6/58 (10%)
Query: 991 KCHICKVCGAKI---KGNLQKHMLSHTGEKPFCCHICGK--SLKGNLKDHILKCHTGE 1043
+ +C+VC + + +L++H SHT EKP+ C +C + + + L H K H+G
Sbjct: 1 RSFVCEVCT-RAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGN 57
Score = 48.6 bits (117), Expect = 2e-07
Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 6/54 (11%)
Query: 902 FECDYCKMKFKSKSFLSEHINTHTGNKPYQCQICKKSFANKRSYQRD-LKRHKQ 954
F C+ C F + L H +HT KPY C +C ++F +RD L RH Q
Sbjct: 3 FVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFT-----RRDLLIRHAQ 51
Score = 46.7 bits (112), Expect = 1e-06
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 7/61 (11%)
Query: 1537 KPYQCQICNKSFGTRRNYRLHLKRHKRSAGQLKPEDIHECKICHKIFLENSRLTRHMNFT 1596
+ + C++C ++F + HLKRH RS KP + C +C++ F L RH
Sbjct: 1 RSFVCEVCTRAF----ARQEHLKRHYRSHTNEKP---YPCGLCNRAFTRRDLLIRHAQKI 53
Query: 1597 H 1597
H
Sbjct: 54 H 54
Score = 45.2 bits (108), Expect = 3e-06
Identities = 21/53 (39%), Positives = 26/53 (49%), Gaps = 4/53 (7%)
Query: 1356 FECIYCKKKYRRKFDLKEHINKHTGNKPYHCQICKESFYTLKTYRGDLKRHEQ 1408
F C C + + R+ LK H HT KPY C +C +F T R L RH Q
Sbjct: 3 FVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAF----TRRDLLIRHAQ 51
Score = 45.2 bits (108), Expect = 3e-06
Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Query: 632 KKYECDSCNKKFWSKRALSEHMIIHTGIKEHQCHVCNTAFYHIRSLSRHL-KIH 684
+ + C+ C + F + L H HT K + C +CN AF L RH KIH
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIH 54
Score = 43.2 bits (103), Expect = 1e-05
Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 6/53 (11%)
Query: 1948 KCHVCKVCGAKI---KGNMKRHMLSHTGEKPFCCDICGK--SLKGNLKAHILR 1995
+ VC+VC + + ++KRH SHT EKP+ C +C + + + L H +
Sbjct: 1 RSFVCEVCT-RAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQK 52
Score = 42.9 bits (102), Expect = 2e-05
Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 10/64 (15%)
Query: 597 KRYMCDICGKQFTTLSYLDLHRKSH-NETVKRKEEDKKYECDSCNKKFWSKRALSEHMI- 654
+ ++C++C + F +L H +SH NE K Y C CN+ F + L H
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRSHTNE--------KPYPCGLCNRAFTRRDLLIRHAQK 52
Query: 655 IHTG 658
IH+G
Sbjct: 53 IHSG 56
Score = 42.9 bits (102), Expect = 2e-05
Identities = 13/51 (25%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Query: 1974 KPFCCDICGK--SLKGNLKAHILRCQGERPYKCDVCGSSFKDKKHFSVHIR 2022
+ F C++C + + + +LK H E+PY C +C +F + H +
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQ 51
Score = 37.5 bits (88), Expect = 0.002
Identities = 16/61 (26%), Positives = 31/61 (50%), Gaps = 7/61 (11%)
Query: 928 KPYQCQICKKSFANKRSYQRDLKRHKQLAGQLKPEDIHECKICHKTFLEKGSLAKHMNWV 987
+ + C++C ++F + Q LKRH + KP + C +C++ F + L +H +
Sbjct: 1 RSFVCEVCTRAF----ARQEHLKRHYRSHTNEKP---YPCGLCNRAFTRRDLLIRHAQKI 53
Query: 988 H 988
H
Sbjct: 54 H 54
Score = 36.3 bits (85), Expect = 0.004
Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Query: 370 QCPLCTKIFTTAKHMRVHLRSVHNGKERKFICDICGKQFTSNIHASRHK 418
C +CT+ F +H++ H RS H E+ + C +C + FT RH
Sbjct: 4 VCEVCTRAFARQEHLKRHYRS-HTN-EKPYPCGLCNRAFTRRDLLIRHA 50
Score = 35.2 bits (82), Expect = 0.011
Identities = 19/59 (32%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 1299 CPVCHKTYSTPKTMRRHLRQVHTSQKRYLCDICGKQFTSTNRVNIHKACVHSSTGNKFE 1357
C VC + ++ + ++RH R HT++K Y C +C + FT + + H +H +GN E
Sbjct: 5 CEVCTRAFARQEHLKRHYR-SHTNEKPYPCGLCNRAFTRRDLLIRHAQKIH--SGNLGE 60
Score = 34.8 bits (81), Expect = 0.017
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 6/56 (10%)
Query: 752 FHCDTCGKYFRSRQICNKHIKRVHLNPT--KTFKCDLCSDRFSTSAKLKKHVDKIH 805
F C+ C + F ++ +H R H T K + C LC+ F+ L +H KIH
Sbjct: 3 FVCEVCTRAFARQEHLKRH-YRSH---TNEKPYPCGLCNRAFTRRDLLIRHAQKIH 54
Score = 34.8 bits (81), Expect = 0.018
Identities = 20/62 (32%), Positives = 26/62 (41%), Gaps = 6/62 (9%)
Query: 660 KEHQCHVCNTAFYHIRSLSRHLKIH--EYNESKMYKCPVCSKMFTELYEMKRHRDHKHGG 717
+ C VC AF L RH + H E K Y C +C++ FT + RH H G
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRSHTNE----KPYPCGLCNRAFTRRDLLIRHAQKIHSG 56
Query: 718 KC 719
Sbjct: 57 NL 58
Score = 34.4 bits (80), Expect = 0.021
Identities = 15/46 (32%), Positives = 22/46 (47%)
Query: 430 ECDYCKRKFTCKRYLAEHINAHTGNTIYGCRICKKTFLYTNGLRRH 475
C+ C R F + +L H +HT Y C +C + F + L RH
Sbjct: 4 VCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRH 49
Score = 32.8 bits (76), Expect = 0.083
Identities = 15/53 (28%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 841 CPVCHKTYSTPKSMRKHLREVHSSQKKYVCDMCGKQFTSNNRVSQHKAYSHFG 893
C VC + ++ + +++H R H+++K Y C +C + FT + + +H H G
Sbjct: 5 CEVCTRAFARQEHLKRHYR-SHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSG 56
Score = 32.5 bits (75), Expect = 0.10
Identities = 19/65 (29%), Positives = 25/65 (38%), Gaps = 17/65 (26%)
Query: 399 FICDICGKQFTSNIHASRH-------KNYAHSRDRQKMECDYCKRKFTCKRYLAEHIN-A 450
F+C++C + F H RH K Y C C R FT + L H
Sbjct: 3 FVCEVCTRAFARQEHLKRHYRSHTNEKPY---------PCGLCNRAFTRRDLLIRHAQKI 53
Query: 451 HTGNT 455
H+GN
Sbjct: 54 HSGNL 58
Score = 31.7 bits (73), Expect = 0.23
Identities = 16/57 (28%), Positives = 24/57 (42%), Gaps = 8/57 (14%)
Query: 1450 KCPVCHKTYSTP----RQMRIHLREAHSQKKYACDVCGKQFTSTNRVSQHKAHSHFG 1502
C VC + ++ R R H E K Y C +C + FT + + +H H G
Sbjct: 4 VCEVCTRAFARQEHLKRHYRSHTNE----KPYPCGLCNRAFTRRDLLIRHAQKIHSG 56
Score = 30.9 bits (71), Expect = 0.35
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 7/57 (12%)
Query: 1889 CPICKKGFIALKHMKTHLKKHMWKAGEIPLEDTYLCDLCSKVFLEHKDMIRHREWVH 1945
C +C + F +H+K H + H E P Y C LC++ F +IRH + +H
Sbjct: 5 CEVCTRAFARQEHLKRHYRSH---TNEKP----YPCGLCNRAFTRRDLLIRHAQKIH 54
Score = 30.1 bits (69), Expect = 0.69
Identities = 8/24 (33%), Positives = 15/24 (62%)
Query: 1651 FKCGICGKCYKTREKCRRHIKRIH 1674
+ CG+C + + R+ RH ++IH
Sbjct: 31 YPCGLCNRAFTRRDLLIRHAQKIH 54
Score = 30.1 bits (69), Expect = 0.81
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Query: 1798 CPVCNKEYATPVTMRKHLREVHVSKKKFKCDLCQKQFKASRSLQCHKQFVHLG 1850
C VC + +A +++H R H ++K + C LC + F L H Q +H G
Sbjct: 5 CEVCTRAFARQEHLKRHYR-SHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSG 56
Score = 29.0 bits (66), Expect = 2.0
Identities = 8/26 (30%), Positives = 14/26 (53%), Gaps = 4/26 (15%)
Query: 1072 KPYNCDYCGQTFAARSTFTFHLKKHE 1097
+ + C+ C + FA + HLK+H
Sbjct: 1 RSFVCEVCTRAFARQE----HLKRHY 22
Score = 28.2 bits (64), Expect = 3.7
Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Query: 105 CRICTEVFENLTLLRRHMRVKHPGEQNLPCRLCDMSFSNKYQKKKHYSAFHKG 157
C +CT F L+RH R H E+ PC LC+ +F+ + +H H G
Sbjct: 5 CEVCTRAFARQEHLKRHYRS-HTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSG 56
>2j7j_A Transcription factor IIIA; zinc finger module, alternative
initiation, nuclear protein, phosphorylation, hydrophobic
core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP:
g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A
Length = 85
Score = 60.3 bits (147), Expect = 3e-11
Identities = 25/79 (31%), Positives = 31/79 (39%), Gaps = 8/79 (10%)
Query: 1024 CGKSLK--GNLKDHILKCHTGERPYKCDV--CGSSFKDKWYLGVHMRKHNGEKPYNCDYC 1079
CGK+ K LK H HT + PY+C C F L H + H G D C
Sbjct: 9 CGKAFKKHNQLKVH-QFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSC 67
Query: 1080 GQTFAARSTFTFHLKKHEE 1098
T+T +LK E
Sbjct: 68 SFVG---KTWTLYLKHVAE 83
Score = 56.5 bits (137), Expect = 7e-10
Identities = 23/91 (25%), Positives = 38/91 (41%), Gaps = 11/91 (12%)
Query: 1511 FECDF--CKKKFYRNFDLQEHINTHTGNKPYQC--QICNKSFGTRRNYRLHLKRHKRSAG 1566
+ C F C K F ++ L+ H +HT PY+C + C+K F LKRH++
Sbjct: 2 YVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPS----RLKRHEKVHA 57
Query: 1567 QLKPEDIHECKICHKIFLENSRLTRHMNFTH 1597
+ C K + + +H+ H
Sbjct: 58 GYPCKKDDSCSFVGKTW---TLYLKHVAECH 85
Score = 50.7 bits (122), Expect = 9e-08
Identities = 24/88 (27%), Positives = 32/88 (36%), Gaps = 10/88 (11%)
Query: 1477 YACDV--CGKQFTSTNRVSQHKAHSHFGIIKTIQRKFECDF--CKKKFYRNFDLQEHINT 1532
Y C CGK F + +Q K H T Q +EC C K+F L+ H
Sbjct: 2 YVCHFENCGKAFK---KHNQLKVHQ---FSHTQQLPYECPHEGCDKRFSLPSRLKRHEKV 55
Query: 1533 HTGNKPYQCQICNKSFGTRRNYRLHLKR 1560
H G + C+ T Y H+
Sbjct: 56 HAGYPCKKDDSCSFVGKTWTLYLKHVAE 83
Score = 50.3 bits (121), Expect = 9e-08
Identities = 22/89 (24%), Positives = 34/89 (38%), Gaps = 13/89 (14%)
Query: 599 YMCDI--CGKQFTTLSYLDLHRKSH-NETVKRKEEDKKYECD--SCNKKFWSKRALSEHM 653
Y+C CGK F + L +H+ SH + YEC C+K+F L H
Sbjct: 2 YVCHFENCGKAFKKHNQLKVHQFSHTQQ--------LPYECPHEGCDKRFSLPSRLKRHE 53
Query: 654 IIHTGIKEHQCHVCNTAFYHIRSLSRHLK 682
+H G + C+ +H+
Sbjct: 54 KVHAGYPCKKDDSCSFVGKTWTLYLKHVA 82
Score = 49.9 bits (120), Expect = 1e-07
Identities = 22/86 (25%), Positives = 29/86 (33%), Gaps = 6/86 (6%)
Query: 634 YECD--SCNKKFWSKRALSEHMIIHTGIKEHQCHV--CNTAFYHIRSLSRHLKIHEYNES 689
Y C +C K F L H HT ++C C+ F L RH K+H
Sbjct: 2 YVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHA--GY 59
Query: 690 KMYKCPVCSKMFTELYEMKRHRDHKH 715
K CS + +H H
Sbjct: 60 PCKKDDSCSFVGKTWTLYLKHVAECH 85
Score = 48.4 bits (116), Expect = 5e-07
Identities = 24/91 (26%), Positives = 37/91 (40%), Gaps = 11/91 (12%)
Query: 902 FECDY--CKMKFKSKSFLSEHINTHTGNKPYQC--QICKKSFANKRSYQRDLKRHKQLAG 957
+ C + C FK + L H +HT PY+C + C K F+ LKRH+++
Sbjct: 2 YVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFS--LPS--RLKRHEKVHA 57
Query: 958 QLKPEDIHECKICHKTFLEKGSLAKHMNWVH 988
+ C KT+ KH+ H
Sbjct: 58 GYPCKKDDSCSFVGKTW---TLYLKHVAECH 85
Score = 48.0 bits (115), Expect = 7e-07
Identities = 22/88 (25%), Positives = 34/88 (38%), Gaps = 10/88 (11%)
Query: 868 YVCDM--CGKQFTSNNRVSQHKAYSHFGIIKTIERKFECDY--CKMKFKSKSFLSEHINT 923
YVC CGK F +N++ H+ +SH + +EC + C +F S L H
Sbjct: 2 YVCHFENCGKAFKKHNQLKVHQ-FSHTQ-----QLPYECPHEGCDKRFSLPSRLKRHEKV 55
Query: 924 HTGNKPYQCQICKKSFANKRSYQRDLKR 951
H G + C Y + +
Sbjct: 56 HAGYPCKKDDSCSFVGKTWTLYLKHVAE 83
Score = 44.9 bits (107), Expect = 9e-06
Identities = 20/73 (27%), Positives = 29/73 (39%), Gaps = 8/73 (10%)
Query: 1326 YLCDI--CGKQFTSTNRVNIHKACVHSSTGNK-FECIY--CKKKYRRKFDLKEHINKHTG 1380
Y+C CGK F N++ +H+ H T +EC + C K++ LK H H G
Sbjct: 2 YVCHFENCGKAFKKHNQLKVHQ-FSH--TQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG 58
Query: 1381 NKPYHCQICKESF 1393
C
Sbjct: 59 YPCKKDDSCSFVG 71
Score = 39.9 bits (94), Expect = 5e-04
Identities = 16/84 (19%), Positives = 32/84 (38%), Gaps = 9/84 (10%)
Query: 840 DCPVCHKTYSTPKSMRKHLREVHSSQKKYVCD--MCGKQFTSNNRVSQHKAYSHFGIIKT 897
C K + ++ H H+ Q Y C C K+F+ +R+ +H+ +
Sbjct: 5 HFENCGKAFKKHNQLKVHQF-SHTQQLPYECPHEGCDKRFSLPSRLKRHE------KVHA 57
Query: 898 IERKFECDYCKMKFKSKSFLSEHI 921
+ D C K+ + +H+
Sbjct: 58 GYPCKKDDSCSFVGKTWTLYLKHV 81
Score = 39.1 bits (92), Expect = 9e-04
Identities = 20/84 (23%), Positives = 31/84 (36%), Gaps = 10/84 (11%)
Query: 572 CPICEKIFAAPKQMRMHLRHVHSSIKRYMCD--ICGKQFTTLSYLDLHRKSHNETVKRKE 629
C K F Q+++H H+ Y C C K+F+ S L H K H
Sbjct: 6 FENCGKAFKKHNQLKVHQF-SHTQQLPYECPHEGCDKRFSLPSRLKRHEKVH-------A 57
Query: 630 EDKKYECDSCNKKFWSKRALSEHM 653
+ DSC+ + +H+
Sbjct: 58 GYPCKKDDSCSFVGKTWTLYLKHV 81
Score = 38.8 bits (91), Expect = 0.001
Identities = 17/85 (20%), Positives = 27/85 (31%), Gaps = 8/85 (9%)
Query: 964 IHECKI--CHKTFLEKGSLAKHMNWVHGDKCHICKV--CGAK--IKGNLQKHMLSHTGEK 1017
++ C C K F + L H + C C + + L++H H G
Sbjct: 1 MYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYP 60
Query: 1018 PFCCHICGKSLK--GNLKDHILKCH 1040
C K H+ +CH
Sbjct: 61 CKKDDSCSFVGKTWTLYLKHVAECH 85
Score = 35.3 bits (82), Expect = 0.018
Identities = 19/83 (22%), Positives = 28/83 (33%), Gaps = 8/83 (9%)
Query: 1922 YLCDL--CSKVFLEHKDMIRHREWVHGDKCHVCKV--CGAK--IKGNMKRHMLSHTGEKP 1975
Y+C C K F +H + H+ + C C + + +KRH H G
Sbjct: 2 YVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPC 61
Query: 1976 FCCDICGKSLK--GNLKAHILRC 1996
D C K H+ C
Sbjct: 62 KKDDSCSFVGKTWTLYLKHVAEC 84
Score = 34.9 bits (81), Expect = 0.025
Identities = 18/110 (16%), Positives = 27/110 (24%), Gaps = 30/110 (27%)
Query: 371 CPLCTKIFTTAKHMRVHLRSVHNGKERKFICDICGKQFTSNIHASRHKNYAHSRDRQKME 430
C K F ++VH S H + + C G
Sbjct: 6 FENCGKAFKKHNQLKVHQFS-HTQ-QLPYECPHEG------------------------- 38
Query: 431 CDYCKRKFTCKRYLAEHINAHTGNTIYGCRICKKTFLYTNGLRRHILSRH 480
C ++F+ L H H G C +H+ H
Sbjct: 39 ---CDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTWTLYLKHVAECH 85
Score = 33.7 bits (78), Expect = 0.062
Identities = 12/48 (25%), Positives = 19/48 (39%), Gaps = 1/48 (2%)
Query: 1801 CNKEYATPVTMRKHLREVHVSKKKFKCDLCQKQFKASRSLQCHKQFVH 1848
C+K ++ P +++H + VH K D C K H H
Sbjct: 39 CDKRFSLPSRLKRHEK-VHAGYPCKKDDSCSFVGKTWTLYLKHVAECH 85
Score = 33.4 bits (77), Expect = 0.10
Identities = 21/88 (23%), Positives = 30/88 (34%), Gaps = 10/88 (11%)
Query: 1825 FKCDL--CQKQFKASRSLQCHKQFVHLGVHKPKFLNMECDY--CSRKFPSKNEVTNHIKS 1880
+ C C K FK L+ H QF H P EC + C ++F + + H K
Sbjct: 2 YVCHFENCGKAFKKHNQLKVH-QFSHTQ-QLP----YECPHEGCDKRFSLPSRLKRHEKV 55
Query: 1881 HMGVRDILCPICKKGFIALKHMKTHLKK 1908
H G C H+ +
Sbjct: 56 HAGYPCKKDDSCSFVGKTWTLYLKHVAE 83
Score = 33.0 bits (76), Expect = 0.12
Identities = 16/56 (28%), Positives = 21/56 (37%), Gaps = 4/56 (7%)
Query: 752 FHCD--TCGKYFRSRQICNKHIKRVHLNPTKTFKCDLCSDRFSTSAKLKKHVDKIH 805
+ C C K F +H ++VH K D CS T KHV + H
Sbjct: 32 YECPHEGCDKRFSLPSRLKRH-EKVHAG-YPCKKDDSCSFVGKTWTLYLKHVAECH 85
Score = 31.1 bits (71), Expect = 0.67
Identities = 13/48 (27%), Positives = 22/48 (45%), Gaps = 2/48 (4%)
Query: 575 CEKIFAAPKQMRMHLRHVHSSIKRYMCDICGKQFTTLS-YLDLHRKSH 621
C+K F+ P +++ H + VH+ D C T + YL + H
Sbjct: 39 CDKRFSLPSRLKRHEK-VHAGYPCKKDDSCSFVGKTWTLYLKHVAECH 85
Score = 31.1 bits (71), Expect = 0.71
Identities = 30/141 (21%), Positives = 35/141 (24%), Gaps = 62/141 (43%)
Query: 1539 YQCQI--CNKSFGTRRNYRLHLKRHKRSAGQLKPEDIHECK--ICHKIFLENSRLTRHMN 1594
Y C C K+F LK H+ S Q P +EC C K F SRL RH
Sbjct: 2 YVCHFENCGKAFKKHN----QLKVHQFSHTQQLP---YECPHEGCDKRFSLPSRLKRHEK 54
Query: 1595 FTH-GDKCHGATNSTDKIFRDADSIVHPNSTVWAKRLITELKEDEYSSLKRAISKGSFKC 1653
H G C K
Sbjct: 55 -VHAGYPC-------------------------------------------------KKD 64
Query: 1654 GICGKCYKTREKCRRHIKRIH 1674
C KT +H+ H
Sbjct: 65 DSCSFVGKTWTLYLKHVAECH 85
Score = 31.1 bits (71), Expect = 0.73
Identities = 12/48 (25%), Positives = 20/48 (41%), Gaps = 1/48 (2%)
Query: 844 CHKTYSTPKSMRKHLREVHSSQKKYVCDMCGKQFTSNNRVSQHKAYSH 891
C K +S P +++H + VH+ D C + +H A H
Sbjct: 39 CDKRFSLPSRLKRHEK-VHAGYPCKKDDSCSFVGKTWTLYLKHVAECH 85
Score = 29.9 bits (68), Expect = 1.6
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 5/55 (9%)
Query: 753 HCDTCGKYFRSRQICNKHIKRVHLNPTKTFKCD--LCSDRFSTSAKLKKHVDKIH 805
H + CGK F+ H + H ++C C RFS ++LK+H K+H
Sbjct: 5 HFENCGKAFKKHNQLKVH-QFSHTQ-QLPYECPHEGCDKRFSLPSRLKRHE-KVH 56
Score = 29.5 bits (67), Expect = 2.2
Identities = 12/45 (26%), Positives = 17/45 (37%), Gaps = 2/45 (4%)
Query: 1302 CHKTYSTPKTMRRHLRQVHTSQKRYLCDICGKQF-TSTNRVNIHK 1345
C K +S P ++RH + VH D C T T +
Sbjct: 39 CDKRFSLPSRLKRHEK-VHAGYPCKKDDSCSFVGKTWTLYLKHVA 82
Score = 29.1 bits (66), Expect = 3.5
Identities = 23/90 (25%), Positives = 30/90 (33%), Gaps = 11/90 (12%)
Query: 1860 ECDY--CSRKFPSKNEVTNHIKSHMGVRDILC--PICKKGFIALKHMKTHLKKHMWKAGE 1915
C + C + F N++ H SH C C K F +K H K H AG
Sbjct: 3 VCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVH---AGY 59
Query: 1916 IPLEDTYLCDLCSKVFLEHKDMIRHREWVH 1945
D CS V ++H H
Sbjct: 60 PC----KKDDSCSFVGKTWTLYLKHVAECH 85
Score = 28.4 bits (64), Expect = 6.3
Identities = 22/102 (21%), Positives = 29/102 (28%), Gaps = 23/102 (22%)
Query: 430 ECDY--CKRKFTCKRYLAEHINAHTGNTIYGC--RICKKTFLYTNGLRRHILSRHKDTDV 485
C + C + F L H +HT Y C C K F L RH+
Sbjct: 3 VCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFS-----LPSRLKRHEKV-- 55
Query: 486 VILNEVKDIFPSHLQSYQIKCRYCARTFSTQNDLKEHVSSVH 527
H K C+ T +HV+ H
Sbjct: 56 ------------HAGYPCKKDDSCSFVGKTWTLYLKHVAECH 85
>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 58.7 bits (143), Expect = 4e-11
Identities = 15/38 (39%), Positives = 20/38 (52%)
Query: 1040 HTGERPYKCDVCGSSFKDKWYLGVHMRKHNGEKPYNCD 1077
TGE+PY C+VCG +F +L H+R H E
Sbjct: 7 GTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS 44
Score = 42.9 bits (102), Expect = 2e-05
Identities = 14/45 (31%), Positives = 20/45 (44%), Gaps = 6/45 (13%)
Query: 1965 RHMLSHTGEKPFCCDICGKSLKGNLKAHILRCQ----GERPYKCD 2005
S TGEKP+ C++CGK+ L AH+ + E
Sbjct: 2 SSGSSGTGEKPYSCNVCGKAF--VLSAHLNQHLRVHTQETLSGPS 44
Score = 40.6 bits (96), Expect = 1e-04
Identities = 12/33 (36%), Positives = 17/33 (51%)
Query: 1064 HMRKHNGEKPYNCDYCGQTFAARSTFTFHLKKH 1096
GEKPY+C+ CG+ F + HL+ H
Sbjct: 3 SGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVH 35
Score = 40.2 bits (95), Expect = 1e-04
Identities = 13/36 (36%), Positives = 18/36 (50%), Gaps = 4/36 (11%)
Query: 1528 EHINTHTGNKPYQCQICNKSFGTRRNYRLHLKRHKR 1563
++ TG KPY C +C K+F HL +H R
Sbjct: 2 SSGSSGTGEKPYSCNVCGKAF----VLSAHLNQHLR 33
Score = 37.9 bits (89), Expect = 8e-04
Identities = 9/38 (23%), Positives = 16/38 (42%)
Query: 895 IKTIERKFECDYCKMKFKSKSFLSEHINTHTGNKPYQC 932
T E+ + C+ C F + L++H+ HT
Sbjct: 6 SGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGP 43
Score = 37.1 bits (87), Expect = 0.002
Identities = 8/31 (25%), Positives = 13/31 (41%)
Query: 1511 FECDFCKKKFYRNFDLQEHINTHTGNKPYQC 1541
+ C+ C K F + L +H+ HT
Sbjct: 13 YSCNVCGKAFVLSAHLNQHLRVHTQETLSGP 43
Score = 36.7 bits (86), Expect = 0.002
Identities = 14/30 (46%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Query: 1998 GERPYKCDVCGSSFKDKKHFSVHIRNH-GE 2026
GE+PY C+VCG +F H + H+R H E
Sbjct: 9 GEKPYSCNVCGKAFVLSAHLNQHLRVHTQE 38
Score = 36.3 bits (85), Expect = 0.003
Identities = 12/44 (27%), Positives = 20/44 (45%), Gaps = 2/44 (4%)
Query: 651 EHMIIHTGIKEHQCHVCNTAFYHIRSLSRHLKIHEYNESKMYKC 694
TG K + C+VC AF L++HL++H + +
Sbjct: 2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVH--TQETLSGP 43
Score = 35.6 bits (83), Expect = 0.006
Identities = 10/33 (30%), Positives = 15/33 (45%)
Query: 632 KKYECDSCNKKFWSKRALSEHMIIHTGIKEHQC 664
K Y C+ C K F L++H+ +HT
Sbjct: 11 KPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGP 43
Score = 33.3 bits (77), Expect = 0.036
Identities = 11/43 (25%), Positives = 18/43 (41%), Gaps = 2/43 (4%)
Query: 981 AKHMNWVHGDKCHICKVCGA--KIKGNLQKHMLSHTGEKPFCC 1021
+ G+K + C VCG + +L +H+ HT E
Sbjct: 1 GSSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGP 43
Score = 33.3 bits (77), Expect = 0.041
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 919 EHINTHTGNKPYQCQICKKSF 939
++ TG KPY C +C K+F
Sbjct: 2 SSGSSGTGEKPYSCNVCGKAF 22
Score = 33.3 bits (77), Expect = 0.046
Identities = 10/36 (27%), Positives = 14/36 (38%), Gaps = 1/36 (2%)
Query: 1352 TGNK-FECIYCKKKYRRKFDLKEHINKHTGNKPYHC 1386
TG K + C C K + L +H+ HT
Sbjct: 8 TGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGP 43
Score = 30.9 bits (71), Expect = 0.29
Identities = 10/36 (27%), Positives = 17/36 (47%), Gaps = 2/36 (5%)
Query: 1946 GDKCHVCKVCGA--KIKGNMKRHMLSHTGEKPFCCD 1979
G+K + C VCG + ++ +H+ HT E
Sbjct: 9 GEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS 44
Score = 29.0 bits (66), Expect = 1.2
Identities = 11/51 (21%), Positives = 20/51 (39%), Gaps = 8/51 (15%)
Query: 588 HLRHVHSSIKRYMCDICGKQFTTLSYLDLHRKSHNETVKRKEEDKKYECDS 638
+ K Y C++CGK F ++L+ H + H ++ S
Sbjct: 3 SGS-SGTGEKPYSCNVCGKAFVLSAHLNQHLRVHT-------QETLSGPSS 45
Score = 28.6 bits (65), Expect = 2.0
Identities = 9/38 (23%), Positives = 16/38 (42%), Gaps = 6/38 (15%)
Query: 381 AKHMRVHLRSVHNGKERKFICDICGKQFTSNIHASRHK 418
G E+ + C++CGK F + H ++H
Sbjct: 1 GSSGSSG-----TG-EKPYSCNVCGKAFVLSAHLNQHL 32
Score = 27.9 bits (63), Expect = 3.6
Identities = 9/30 (30%), Positives = 15/30 (50%)
Query: 430 ECDYCKRKFTCKRYLAEHINAHTGNTIYGC 459
C+ C + F +L +H+ HT T+ G
Sbjct: 14 SCNVCGKAFVLSAHLNQHLRVHTQETLSGP 43
Score = 27.5 bits (62), Expect = 5.4
Identities = 10/34 (29%), Positives = 15/34 (44%), Gaps = 4/34 (11%)
Query: 1373 EHINKHTGNKPYHCQICKESFYTLKTYRGDLKRH 1406
+ TG KPY C +C ++F L +H
Sbjct: 2 SSGSSGTGEKPYSCNVCGKAF----VLSAHLNQH 31
>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 58.7 bits (143), Expect = 4e-11
Identities = 18/37 (48%), Positives = 20/37 (54%)
Query: 1040 HTGERPYKCDVCGSSFKDKWYLGVHMRKHNGEKPYNC 1076
GE+ YKCDVCG F +L H R H GEKP
Sbjct: 7 GMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGP 43
Score = 42.1 bits (100), Expect = 3e-05
Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 4/35 (11%)
Query: 1062 GVHMRKHNGEKPYNCDYCGQTFAARSTFTFHLKKH 1096
G GEK Y CD CG+ F+ S HL+ H
Sbjct: 1 GSSGSSGMGEKCYKCDVCGKEFSQSS----HLQTH 31
Score = 41.7 bits (99), Expect = 3e-05
Identities = 15/41 (36%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Query: 1966 HMLSHTGEKPFCCDICGK--SLKGNLKAHILRCQGERPYKC 2004
S GEK + CD+CGK S +L+ H GE+P
Sbjct: 3 SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGP 43
Score = 38.3 bits (90), Expect = 6e-04
Identities = 11/35 (31%), Positives = 18/35 (51%), Gaps = 4/35 (11%)
Query: 1529 HINTHTGNKPYQCQICNKSFGTRRNYRLHLKRHKR 1563
++ G K Y+C +C K F + HL+ H+R
Sbjct: 3 SGSSGMGEKCYKCDVCGKEF----SQSSHLQTHQR 33
Score = 38.3 bits (90), Expect = 7e-04
Identities = 16/30 (53%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Query: 1998 GERPYKCDVCGSSFKDKKHFSVHIRNH-GE 2026
GE+ YKCDVCG F H H R H GE
Sbjct: 9 GEKCYKCDVCGKEFSQSSHLQTHQRVHTGE 38
Score = 37.9 bits (89), Expect = 0.001
Identities = 13/31 (41%), Positives = 18/31 (58%)
Query: 1511 FECDFCKKKFYRNFDLQEHINTHTGNKPYQC 1541
++CD C K+F ++ LQ H HTG KP
Sbjct: 13 YKCDVCGKEFSQSSHLQTHQRVHTGEKPSGP 43
Score = 37.5 bits (88), Expect = 0.001
Identities = 13/38 (34%), Positives = 17/38 (44%)
Query: 895 IKTIERKFECDYCKMKFKSKSFLSEHINTHTGNKPYQC 932
E+ ++CD C +F S L H HTG KP
Sbjct: 6 SGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGP 43
Score = 34.0 bits (79), Expect = 0.018
Identities = 13/33 (39%), Positives = 16/33 (48%)
Query: 632 KKYECDSCNKKFWSKRALSEHMIIHTGIKEHQC 664
K Y+CD C K+F L H +HTG K
Sbjct: 11 KCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGP 43
Score = 33.3 bits (77), Expect = 0.042
Identities = 16/35 (45%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
Query: 989 GDKCHICKVCGAKI--KGNLQKHMLSHTGEKPFCC 1021
G+KC+ C VCG + +LQ H HTGEKP
Sbjct: 9 GEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGP 43
Score = 32.9 bits (76), Expect = 0.061
Identities = 7/20 (35%), Positives = 11/20 (55%)
Query: 920 HINTHTGNKPYQCQICKKSF 939
++ G K Y+C +C K F
Sbjct: 3 SGSSGMGEKCYKCDVCGKEF 22
Score = 32.1 bits (74), Expect = 0.096
Identities = 11/45 (24%), Positives = 15/45 (33%), Gaps = 6/45 (13%)
Query: 652 HMIIHTGIKEHQCHVCNTAFYHIRSLSRHLKIH--EYNESKMYKC 694
G K ++C VC F L H ++H E K
Sbjct: 3 SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGE----KPSGP 43
Score = 32.1 bits (74), Expect = 0.12
Identities = 12/36 (33%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Query: 1352 TGNK-FECIYCKKKYRRKFDLKEHINKHTGNKPYHC 1386
G K ++C C K++ + L+ H HTG KP
Sbjct: 8 MGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGP 43
Score = 31.0 bits (71), Expect = 0.29
Identities = 14/51 (27%), Positives = 21/51 (41%), Gaps = 8/51 (15%)
Query: 588 HLRHVHSSIKRYMCDICGKQFTTLSYLDLHRKSHNETVKRKEEDKKYECDS 638
K Y CD+CGK+F+ S+L H++ H +K S
Sbjct: 3 SGS-SGMGEKCYKCDVCGKEFSQSSHLQTHQRVHT-------GEKPSGPSS 45
Score = 30.2 bits (69), Expect = 0.48
Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
Query: 1946 GDKCHVCKVCGAKI--KGNMKRHMLSHTGEKPFCC 1978
G+KC+ C VCG + +++ H HTGEKP
Sbjct: 9 GEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGP 43
Score = 27.1 bits (61), Expect = 6.2
Identities = 10/33 (30%), Positives = 17/33 (51%), Gaps = 2/33 (6%)
Query: 386 VHLRSVHNGKERKFICDICGKQFTSNIHASRHK 418
G E+ + CD+CGK+F+ + H H+
Sbjct: 2 SSGS-SGMG-EKCYKCDVCGKEFSQSSHLQTHQ 32
Score = 26.7 bits (60), Expect = 8.5
Identities = 6/16 (37%), Positives = 8/16 (50%)
Query: 1378 HTGNKPYHCQICKESF 1393
G K Y C +C + F
Sbjct: 7 GMGEKCYKCDVCGKEF 22
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 67.2 bits (163), Expect = 5e-11
Identities = 83/626 (13%), Positives = 170/626 (27%), Gaps = 180/626 (28%)
Query: 1170 RKILSTELQEEQSSLERQNDEDSFKCDIRGKCLKTQEKYNILNVQIYLNPNSKSELSSHG 1229
+ ILS + + ++ +D K L +E +I+ ++ S
Sbjct: 19 KDILSVFEDAFVDNFDCKDVQDMPK-----SILSKEEIDHIIMS-----KDAVSGT---- 64
Query: 1230 LTTSKNLDKYIDILNSNQESLDLDTSDYSLEENEEWNKITYEVETNEP-MDTGDYTLEEY 1288
+ L S QE + + L N ++ + E +P M T Y +E+
Sbjct: 65 -------LRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMY-IEQR 116
Query: 1289 NKIVASGSKDCPVCHKTYSTP-----KTMRRHLRQVHTSQKRYLCDI--CGKQ------- 1334
+++ D V K Y+ +R+ L ++ ++ + + GK
Sbjct: 117 DRL----YNDNQVFAK-YNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVC 171
Query: 1335 ----FTSTNRVNIH------------------KACVHSSTGNKFECIYCKKKYRRKFDLK 1372
I K + R ++
Sbjct: 172 LSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQ 231
Query: 1373 EHINKHTGNKPY-HCQI-----------------CKESFYTLKTYRGDLKRHEQLAEQSD 1414
+ + +KPY +C + CK L T R +Q+ +
Sbjct: 232 AELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCK----ILLT-----TRFKQVTDFLS 282
Query: 1415 EMHSTSKFQNKIKKPLDTGDLSWEEWNELVLSGTKKCPVCHKTYSTPRQM-RIHLREAHS 1473
+T + L +E L+L K + + PR++ + R
Sbjct: 283 AATTTHISLDHHSMTLTP-----DEVKSLLL----KY-LDCRPQDLPREVLTTNPR---- 328
Query: 1474 QKKYACDVCGKQFTS-TNRVSQHKAHSHFGIIKTIQRKFEC----DFCKKKFYRN---FD 1525
+ + K + + I+ ++ +K + F
Sbjct: 329 ----RLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEY--RKMFDRLSVFP 382
Query: 1526 LQEHINTHT-----GNKPYQC------QICNKSFGTRRN----YRLH-----LKR----- 1560
HI T + ++ S ++ + LK
Sbjct: 383 PSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENE 442
Query: 1561 ---HKRSAGQLKPEDIHECKICHKIFLEN---SRLTRHM-NFTHGDKCHGATNSTDKIFR 1613
H+ + +L+ S + H+ N H ++ +F
Sbjct: 443 YALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPER----MTLFRMVFL 498
Query: 1614 DADSI---VHPNSTVWA---------------KRLITELKEDEYSSLKRAISKGSFKCGI 1655
D + + +ST W K I + + +Y L AI K
Sbjct: 499 DFRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPYICD-NDPKYERLVNAILDFLPKIE- 556
Query: 1656 CGKCYKTREKCRRHIKRIHLNSRNEP 1681
++ + RI L + +E
Sbjct: 557 -ENLICSKYTD---LLRIALMAEDEA 578
Score = 62.2 bits (150), Expect = 2e-09
Identities = 97/602 (16%), Positives = 181/602 (30%), Gaps = 184/602 (30%)
Query: 238 DCQSIEDPSLECKNNKASFTCDTCDKPF---DTIEKCRRHAIRMHMNPCKMFKCDICVAS 294
DC+ ++D K+ + + D D + R + +M + V
Sbjct: 34 DCKDVQDMP------KSILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQ--KFVEE 85
Query: 295 FLTPHK--LKTHIKTKHRTQLKELYTFECQHCEDKFSTPFELNKHN---ESKHEKGRK-- 347
L + L + IKT+ R + Q + ++ K+N + K R+
Sbjct: 86 VLRINYKFLMSPIKTEQRQPSMMTRMYIEQR-DRLYNDNQVFAKYNVSRLQPYLKLRQAL 144
Query: 348 --LNPETG---------GYTYEEYK-----EVVVSKSKQCPLCTKIFTTAKHMRVHLRSV 391
L P G K +V +S QC + KIF ++L++
Sbjct: 145 LELRPAKNVLIDGVLGSG------KTWVALDVCLSYKVQCKMDFKIFW------LNLKNC 192
Query: 392 HNGKER-KFICDICGKQFTSNIHASRHKNYAHSRDRQKMECDYCKRKFTCKRY---L--- 444
++ + + + + Q N SR + ++ + R +R K Y L
Sbjct: 193 NSPETVLEMLQKLL-YQIDPNWT-SRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVL 250
Query: 445 -----AEHINAHTGNTIYGCRICKKTFLYTNGLRRHILSRHKD-TDVVILNEVKDIFPSH 498
A+ NA C+I L T +R K TD + I H
Sbjct: 251 LNVQNAKAWNAFNL----SCKI-----LLT--------TRFKQVTDFLSAATTTHISLDH 293
Query: 499 L-------QSYQIKCRYCARTFSTQ-NDLKEHVSSVH-----MFMTESFENPNEP---RV 542
+ + + + DL V + + + + +
Sbjct: 294 HSMTLTPDEVKSL----LLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKH 349
Query: 543 LNSNRYPLAIDGGL-SLE--EYQQI-----VATKSKQCPI-------CEKIFAAPKQMRM 587
+N ++ I+ L LE EY+++ V S P + I + + +
Sbjct: 350 VNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVV-V 408
Query: 588 HLRHVHSSIKRYMCDICGKQFTTLS----YLDLHRKS------HNETVKRKEEDKKYECD 637
+ H +S +++ + +T+S YL+L K H V K ++ D
Sbjct: 409 NKLHKYSLVEKQPKE------STISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSD 462
Query: 638 SCNKKFWSKRALSEHMIIHTGIKEHQCHVCNTAFYHIRSLSRHLKIHEYNESKMYKCPVC 697
+ + HI HLK E+ E
Sbjct: 463 DLIPPYLD----------------------QYFYSHI---GHHLKNIEHPER-------- 489
Query: 698 SKMFTELY------EMK-RHRDHKHGGKCHVCKICGATIKLFTELEE------KEDSSFE 744
+F ++ E K RH G+ + +L+ D +E
Sbjct: 490 MTLFRMVFLDFRFLEQKIRH-------DSTAWNASGSILNTLQQLKFYKPYICDNDPKYE 542
Query: 745 RK 746
R
Sbjct: 543 RL 544
Score = 54.9 bits (131), Expect = 3e-07
Identities = 85/691 (12%), Positives = 183/691 (26%), Gaps = 197/691 (28%)
Query: 743 FERKKSKDSFHC----DTCGKYFRSRQICNKHIKRVHLNPTKT---FKCDLCSDRFSTSA 795
FE + F C D +I HI + T F L S +
Sbjct: 25 FEDAFVDN-FDCKDVQDMPKSILSKEEI--DHIIMSKDAVSGTLRLFWT-LLSKQEEMVQ 80
Query: 796 KLKKHVDKIHFTPEFQEPSKKNEPLDTGDYTLEQWNELVTAQSKDCPVCHKTYSTP---- 851
K + V +I++ +F K E T + E D V K Y+
Sbjct: 81 KFVEEVLRINY--KFLMSPIKTEQRQPSMMT-RMYIEQRDRLYNDNQVFAK-YNVSRLQP 136
Query: 852 -KSMRKHLREVHSSQKKYVCDM--CGKQFTSNNRVSQHKAYSHFG--------------- 893
+R+ L E+ ++ + + GK + + + +K
Sbjct: 137 YLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPE 196
Query: 894 ----IIKTIERKFECDYCKMKFKSKSFLSEHINTHTGNKPYQCQICKKSFANKRSYQRDL 949
+++ + + + ++ S + + I+ Q + + Y+ L
Sbjct: 197 TVLEMLQKLLYQIDPNWTSRSDHSSN-IKLRIH--------SIQAELRRLLKSKPYENCL 247
Query: 950 K--RHKQLAGQLKPEDIHECKICHKTFLEKGSLAKHMNWVHGDKCHICKVCGAKIKGNLQ 1007
+ Q A ++ CKI T K +
Sbjct: 248 LVLLNVQNAKAWNAFNLS-CKILLTT---------------RFKQVT-----DFLSAATT 286
Query: 1008 KHMLSHTGEKPFCCH----ICGKSLKGNLKD---HILKCHTGERPYKCDVCGSSFKDKWY 1060
H+ + K L +D +L + P + + S +D
Sbjct: 287 THISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTN----PRRLSIIAESIRD--- 339
Query: 1061 LGVHMRKHNGEKPYNCDYCGQTFAARSTFTFHLKKHEENGSVDFDEIVESRTVGVIGYLN 1120
A H+ + I+ES
Sbjct: 340 ----------------------GLATWDNWKHVNCDK------LTTIIES---------- 361
Query: 1121 LSYSIVIQNGGDGSKSCLLRCANRIVRERDRVVCARASPWVPKDELTTSRKILSTELQEE 1180
S+ + + + R + + S +P L ++ ++ +
Sbjct: 362 ---SLNVLEPAE-YRKMFDRLS--VFPP---------SAHIPTILL----SLIWFDVIKS 402
Query: 1181 -----------QSSLERQNDEDSFKCDIRGKCLKTQEKYNILNVQIYLNPNSKSELSSHG 1229
S +E+Q E +I ++ + L ++E + H
Sbjct: 403 DVMVVVNKLHKYSLVEKQPKE---------------STISIPSIYLELKVKLENEYALH- 446
Query: 1230 LTTSKNLDKYIDILNSNQESLDLDTSD-YSLEENEEWNKITYEVETNEPMDTGDYTLEEY 1288
+D Y + + L D Y ++ I + ++ E + +
Sbjct: 447 ---RSIVDHYNIPKTFDSDDLIPPYLDQYF------YSHIGHHLKNIEHPERMTLFRMVF 497
Query: 1289 -------NKIVASGSKDCPVCH--KTYSTPKTMRRHLRQVHTSQKRYLCDICGKQFTSTN 1339
KI + T K + ++ +R + I F
Sbjct: 498 LDFRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPYICDNDPKYERLVNAI--LDFLPKI 555
Query: 1340 RVNIHKA----CVHSSTGNKFECIYCKKKYR 1366
N+ + + + + E I+ ++ ++
Sbjct: 556 EENLICSKYTDLLRIALMAEDEAIF-EEAHK 585
Score = 49.9 bits (118), Expect = 1e-05
Identities = 91/655 (13%), Positives = 181/655 (27%), Gaps = 210/655 (32%)
Query: 920 HINTHTGNKPYQCQ-I-------------CK------KSFANKRSYQR------DLKRHK 953
H++ TG YQ + I CK KS +K +
Sbjct: 6 HMDFETGEHQYQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTL 65
Query: 954 QLAGQL--KPEDIHECKICHKTFLEKGSLAKHMNWVHGDKCHICKVCGAKIKGNLQKHML 1011
+L L K E++ + F+E L + ++ + + +++
Sbjct: 66 RLFWTLLSKQEEM------VQKFVE-EVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDR 118
Query: 1012 SHTGEKPFC-CHICGKSLKGNLKDHILKCHTGERPYKCDVCGSSFKDKWYLGVH-MRKHN 1069
+ + F ++ L+ +L+ RP K + + +
Sbjct: 119 LYNDNQVFAKYNVSRLQPYLKLRQALLEL----RPAK------------NVLIDGVL--- 159
Query: 1070 GEKPYNCDYCGQTFAARSTFTFHLKKHEENGSVDFDEIVESRTVGVIGYLNLSYSIVIQN 1129
G G+T+ A V V+ + I +LNL
Sbjct: 160 G--------SGKTWVA--------------LDVCLSYKVQCKMDFKIFWLNL-------- 189
Query: 1130 GGDGSKSCLLRCANRIVRERDRVVCARASPWV-PKDELTTSRKILSTELQEEQ--SSL-- 1184
S +L +++ + D +R+ K + + + L L+ + + L
Sbjct: 190 KNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLV 249
Query: 1185 --ERQNDE--DSFKCDIRGKCLKTQEKYNILNVQIYLNPNSKSELS----SHGLTTSKNL 1236
QN + ++F ++ K L T + + L+ + + +S S LT +
Sbjct: 250 LLNVQNAKAWNAF--NLSCKILLTTRFKQVTDF---LSAATTTHISLDHHSMTLTPDEVK 304
Query: 1237 DKYIDILNSNQESL---------------------DLDTSDYSLEENEEWNKITYE---- 1271
+ L+ + L L T D W + +
Sbjct: 305 SLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDN-------WKHVNCDKLTT 357
Query: 1272 -----VETNEPMDTGDYTLEEYNKIVASGSKDCPV---------CHKTYSTPKTMRRHLR 1317
+ EP + ++++ + S + L
Sbjct: 358 IIESSLNVLEPAEYRKM----FDRLSVF-PPSAHIPTILLSLIWFDVIKSDVMVVVNKLH 412
Query: 1318 Q---VHTSQKRYLCDICGKQF----TSTNRVNIHKACVHSSTGNKFECIYCKKKYRRKFD 1370
+ V K I N +H++ V Y + FD
Sbjct: 413 KYSLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDH---------Y---NIPKTFD 460
Query: 1371 LKEHINKHTGNKPYHCQICKESFYTLKTYRGDLKRHEQLAEQSDEMHSTSK-FQNKIKKP 1429
+ I + Y FY ++ G H + E + M F
Sbjct: 461 SDDLIPPYLDQ--Y--------FY---SHIG---HHLKNIEHPERMTLFRMVFL------ 498
Query: 1430 LDTGDLSWEEWNELVLSGTKKCPVCHKTYSTPRQMRIHLREAHSQKKYACDVCGK 1484
D + E ++ T +T +Q++ + K Y CD K
Sbjct: 499 ----DFRFLE-QKIRHDST-AWNASGSILNTLQQLKFY-------KPYICDNDPK 540
Score = 40.2 bits (93), Expect = 0.008
Identities = 35/281 (12%), Positives = 83/281 (29%), Gaps = 71/281 (25%)
Query: 48 MEDTSDINGQQGGSNRKSK--ERHLECTQPCEDYLVAVMVALIISNVK-----LEIL-EL 99
T D N + ++ + E L +P E + +++ + L ++
Sbjct: 340 GLATWD-NWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFD 398
Query: 100 PDRRTCRICTEVFENLTLLRRH--------------MRVKHPGEQNLPCRLCDMSFSNKY 145
+ + +L+ + ++VK E L + D Y
Sbjct: 399 VIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVD-----HY 453
Query: 146 QKKKHYSAFHKGMPFIPSFTCPICQKIFKNKEWYL-DHLSLHE-EQLISLNRRKPIHVRS 203
K + + P++ + + ++ HL E + ++L R + R
Sbjct: 454 NIPKTFDSDDLIPPYLDQY-------FY----SHIGHHLKNIEHPERMTLFRMVFLDFR- 501
Query: 204 VRLPSVRGQDIFTTTTKFMRRKAGNVLHVARWFTDCQSIEDPSLECKNNKASFTCDTCDK 263
F+ +K + H + + SI + + K K + CD K
Sbjct: 502 -----------------FLEQK---IRHDSTAWNASGSILNTLQQLKFYK-PYICDNDPK 540
Query: 264 P---FDTIEK-CRRHAIRMHMNPCKMFKCDICVASFLTPHK 300
+ I + + + D+ + + +
Sbjct: 541 YERLVNAILDFLPKIEENLICSKY----TDLLRIALMAEDE 577
Score = 38.7 bits (89), Expect = 0.026
Identities = 79/664 (11%), Positives = 156/664 (23%), Gaps = 218/664 (32%)
Query: 447 HINAHTGNTIYGCRICKKTFL----------YTNGLRRHILSRHKDTDVVILNEVKDIF- 495
H++ TG Y + F + + ILS+ E+ I
Sbjct: 6 HMDFETGEHQYQYKDILSVFEDAFVDNFDCKDVQDMPKSILSK---------EEIDHIIM 56
Query: 496 -PSHLQSYQIKCRYCARTFSTQNDLKEHVSSVHMFMTESFENPNEPRVLNSNRYPLAIDG 554
+ T ++ + V F+ E N +++ +
Sbjct: 57 SKDAVS----GTLRLFWTLLSKQE-----EMVQKFV-EEVLRINYKFLMSPIKTE-QRQP 105
Query: 555 GLSLEEYQQIVATKSKQCPICEKIFAAPKQMRMHLRHVHSSIKRYMCDI-------CGKQ 607
+ Y + + K + Q + LR ++ ++ GK
Sbjct: 106 SMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRP-AKNVLIDGVLGSGK- 163
Query: 608 FTTLSYLDLHRKSHNETVKRKEEDKKYECDSCNKKFWSKRALSEHMIIHTGIKEHQCHVC 667
T ++ + K +C K FW ++ C+
Sbjct: 164 -TWVA---------LDVCL----SYKVQCKMDFKIFW----------LNLK----NCNSP 195
Query: 668 NTAFYHIRSLSRHLKIHEYNESKMYKCPVCSKMFTELYEMKRHRDHKHGGKCHVCKICGA 727
T ++ L + +T DH +
Sbjct: 196 ETVLEMLQKLLYQI----------------DPNWTSR------SDH------------SS 221
Query: 728 TIKLFTELEEKEDSSFERKKSKDSFHCDTCGKYFRS----RQICN-KHIKRVHLNPTKTF 782
IKL + E + K Y + N K N
Sbjct: 222 NIKLRIHSIQAELRRLLKSK-----------PYENCLLVLLNVQNAKAWN--AFN----L 264
Query: 783 KCD-LCSDRFST-----SAKLKKHVDKIHFTPEFQEPSKKNEPLDTGDYTLEQWNELVTA 836
C L + RF SA H+ H + T D + +
Sbjct: 265 SCKILLTTRFKQVTDFLSAATTTHISLDHHSMTL-----------TPDEVKSLLLKYLDC 313
Query: 837 QSKDCPVCHKTYSTPKSMRKHLREVHSSQKKYVCDMCGKQFTSN-NRVSQHKAYSHFGII 895
+ +D P REV ++ + + K + +
Sbjct: 314 RPQDLP----------------REVLTTNP-RRLSIIAESIRDGLATWDNWKHVNCDKLT 356
Query: 896 KTIERKFEC---DYCKMKFKSKSFLSEHINTHTGNKPYQCQICKKSFANKRSYQRDLKRH 952
IE + F S + P L
Sbjct: 357 TIIESSLNVLEPAEYRKMFDRLSVFPPSAHI-----PTIL----------------LSL- 394
Query: 953 KQLAGQLKPEDIHECKICHKTFLEKGSLAKHMNWVHGDKCHICKVCGAKIKGNLQKHMLS 1012
+ + D+ + +K L K SL + I ++ +
Sbjct: 395 --IWFDVIKSDVMV--VVNK--LHKYSLVE--KQPKESTISI---------PSIYLELKV 437
Query: 1013 HTGEKPFCCHICGKSLKGNLKDHILKCHTGERPYKCDVCGSSFKDK---WYLGVHMRK-H 1068
+ L I+ + + + D + D+ ++G H++
Sbjct: 438 KLENEY------------ALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIE 485
Query: 1069 NGEK 1072
+ E+
Sbjct: 486 HPER 489
>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 58.3 bits (142), Expect = 5e-11
Identities = 21/37 (56%), Positives = 23/37 (62%)
Query: 1040 HTGERPYKCDVCGSSFKDKWYLGVHMRKHNGEKPYNC 1076
TGE+PYKCDVC SF+ L VH R H GEKP
Sbjct: 7 GTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGP 43
Score = 42.1 bits (100), Expect = 3e-05
Identities = 14/35 (40%), Positives = 18/35 (51%)
Query: 1062 GVHMRKHNGEKPYNCDYCGQTFAARSTFTFHLKKH 1096
G GEKPY CD C ++F S+ T H + H
Sbjct: 1 GSSGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIH 35
Score = 41.0 bits (97), Expect = 8e-05
Identities = 15/41 (36%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 1966 HMLSHTGEKPFCCDICGK--SLKGNLKAHILRCQGERPYKC 2004
S TGEKP+ CD+C K +L H GE+P
Sbjct: 3 SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGP 43
Score = 38.3 bits (90), Expect = 7e-04
Identities = 14/39 (35%), Positives = 19/39 (48%)
Query: 895 IKTIERKFECDYCKMKFKSKSFLSEHINTHTGNKPYQCQ 933
T E+ ++CD C F+ S L+ H HTG KP
Sbjct: 6 SGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPS 44
Score = 37.9 bits (89), Expect = 0.001
Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 4/35 (11%)
Query: 1529 HINTHTGNKPYQCQICNKSFGTRRNYRLHLKRHKR 1563
++ TG KPY+C +C+KSF Y L H+R
Sbjct: 3 SGSSGTGEKPYKCDVCHKSF----RYGSSLTVHQR 33
Score = 37.5 bits (88), Expect = 0.001
Identities = 17/30 (56%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Query: 1998 GERPYKCDVCGSSFKDKKHFSVHIRNH-GE 2026
GE+PYKCDVC SF+ +VH R H GE
Sbjct: 9 GEKPYKCDVCHKSFRYGSSLTVHQRIHTGE 38
Score = 36.7 bits (86), Expect = 0.002
Identities = 12/32 (37%), Positives = 14/32 (43%)
Query: 1511 FECDFCKKKFYRNFDLQEHINTHTGNKPYQCQ 1542
++CD C K F L H HTG KP
Sbjct: 13 YKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPS 44
Score = 34.8 bits (81), Expect = 0.013
Identities = 14/33 (42%), Positives = 18/33 (54%)
Query: 632 KKYECDSCNKKFWSKRALSEHMIIHTGIKEHQC 664
K Y+CD C+K F +L+ H IHTG K
Sbjct: 11 KPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGP 43
Score = 34.4 bits (80), Expect = 0.017
Identities = 14/45 (31%), Positives = 21/45 (46%), Gaps = 6/45 (13%)
Query: 652 HMIIHTGIKEHQCHVCNTAFYHIRSLSRHLKIH--EYNESKMYKC 694
TG K ++C VC+ +F + SL+ H +IH E K
Sbjct: 3 SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGE----KPSGP 43
Score = 32.9 bits (76), Expect = 0.054
Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 4/34 (11%)
Query: 920 HINTHTGNKPYQCQICKKSFANKRSYQRDLKRHK 953
++ TG KPY+C +C KSF Y L H+
Sbjct: 3 SGSSGTGEKPYKCDVCHKSF----RYGSSLTVHQ 32
Score = 32.9 bits (76), Expect = 0.064
Identities = 14/37 (37%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 1352 TGNK-FECIYCKKKYRRKFDLKEHINKHTGNKPYHCQ 1387
TG K ++C C K +R L H HTG KP
Sbjct: 8 TGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPS 44
Score = 31.7 bits (73), Expect = 0.15
Identities = 13/35 (37%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
Query: 989 GDKCHICKVCGA--KIKGNLQKHMLSHTGEKPFCC 1021
G+K + C VC + +L H HTGEKP
Sbjct: 9 GEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGP 43
Score = 29.0 bits (66), Expect = 1.3
Identities = 11/34 (32%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 588 HLRHVHSSIKRYMCDICGKQFTTLSYLDLHRKSH 621
+ K Y CD+C K F S L +H++ H
Sbjct: 3 SGS-SGTGEKPYKCDVCHKSFRYGSSLTVHQRIH 35
Score = 29.0 bits (66), Expect = 1.4
Identities = 12/35 (34%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
Query: 1946 GDKCHVCKVCGA--KIKGNMKRHMLSHTGEKPFCC 1978
G+K + C VC + ++ H HTGEKP
Sbjct: 9 GEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGP 43
Score = 27.5 bits (62), Expect = 4.9
Identities = 12/29 (41%), Positives = 14/29 (48%), Gaps = 4/29 (13%)
Query: 1378 HTGNKPYHCQICKESFYTLKTYRGDLKRH 1406
TG KPY C +C +SF Y L H
Sbjct: 7 GTGEKPYKCDVCHKSF----RYGSSLTVH 31
>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger,
dimer, protein-DNA complex, cooperativity,
transcription/DNA complex; 2.35A {Mus musculus} SCOP:
g.37.1.1 g.37.1.1
Length = 73
Score = 58.9 bits (143), Expect = 6e-11
Identities = 24/69 (34%), Positives = 32/69 (46%), Gaps = 9/69 (13%)
Query: 1030 GNLKDHILKCHTGERPYKCDV--CGSSFKDKWYLGVHMRKHNGEKPYNCDYCGQTFAARS 1087
NL +++ RPY C V C F L H+R H G+KP+ C C + F +RS
Sbjct: 7 NNLLNYV---VPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNF-SRS 62
Query: 1088 TFTFHLKKH 1096
HL H
Sbjct: 63 D---HLTTH 68
Score = 58.5 bits (142), Expect = 1e-10
Identities = 20/75 (26%), Positives = 36/75 (48%), Gaps = 7/75 (9%)
Query: 1489 TNRVSQHKAHSHFGIIKTIQRKFECD--FCKKKFYRNFDLQEHINTHTGNKPYQCQICNK 1546
+ ++ + R + C C ++F R+ +L HI HTG KP+QC+IC +
Sbjct: 3 PHPMNNLLNYVV-----PKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMR 57
Query: 1547 SFGTRRNYRLHLKRH 1561
+F + H++ H
Sbjct: 58 NFSRSDHLTTHIRTH 72
Score = 53.8 bits (130), Expect = 4e-09
Identities = 19/69 (27%), Positives = 34/69 (49%), Gaps = 7/69 (10%)
Query: 1004 GNLQKHMLSHTGEKPFCCHI--CGKSLK--GNLKDHILKCHTGERPYKCDVCGSSFKDKW 1059
NL ++ +P+ C + C + L HI + HTG++P++C +C +F
Sbjct: 7 NNLLNYV--VPKMRPYACPVESCDRRFSRSDELTRHI-RIHTGQKPFQCRICMRNFSRSD 63
Query: 1060 YLGVHMRKH 1068
+L H+R H
Sbjct: 64 HLTTHIRTH 72
Score = 50.8 bits (122), Expect = 5e-08
Identities = 17/68 (25%), Positives = 31/68 (45%), Gaps = 6/68 (8%)
Query: 1961 GNMKRHMLSHTGEKPFCCDI--CGKSLK--GNLKAHILRCQGERPYKCDVCGSSFKDKKH 2016
N+ ++ +P+ C + C + L HI G++P++C +C +F H
Sbjct: 7 NNLLNYV--VPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDH 64
Query: 2017 FSVHIRNH 2024
+ HIR H
Sbjct: 65 LTTHIRTH 72
Score = 46.9 bits (112), Expect = 1e-06
Identities = 20/69 (28%), Positives = 32/69 (46%), Gaps = 2/69 (2%)
Query: 618 RKSHNETVKRKEEDKKYECD--SCNKKFWSKRALSEHMIIHTGIKEHQCHVCNTAFYHIR 675
+N + + Y C SC+++F L+ H+ IHTG K QC +C F
Sbjct: 4 HPMNNLLNYVVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSD 63
Query: 676 SLSRHLKIH 684
L+ H++ H
Sbjct: 64 HLTTHIRTH 72
Score = 43.8 bits (104), Expect = 2e-05
Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Query: 895 IKTIERKFECDY--CKMKFKSKSFLSEHINTHTGNKPYQCQICKKSFANKRSYQRDLKRH 952
+ R + C C +F L+ HI HTG KP+QC+IC ++F+ ++ H
Sbjct: 13 VVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTH 72
Score = 41.1 bits (97), Expect = 1e-04
Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Query: 1349 HSSTGNK-FECIY--CKKKYRRKFDLKEHINKHTGNKPYHCQICKESF 1393
+ + + C C +++ R +L HI HTG KP+ C+IC +F
Sbjct: 12 YVVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNF 59
Score = 41.1 bits (97), Expect = 1e-04
Identities = 17/46 (36%), Positives = 26/46 (56%)
Query: 1864 CSRKFPSKNEVTNHIKSHMGVRDILCPICKKGFIALKHMKTHLKKH 1909
C R+F +E+T HI+ H G + C IC + F H+ TH++ H
Sbjct: 27 CDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTH 72
Score = 41.1 bits (97), Expect = 1e-04
Identities = 20/78 (25%), Positives = 35/78 (44%), Gaps = 11/78 (14%)
Query: 909 MKFKSKSFLSEHINTHTGNKPYQCQI--CKKSFANKRSYQRDLKRHKQLAGQLKPEDIHE 966
M+ + L ++ +PY C + C + F+ RS +L RH ++ KP +
Sbjct: 1 MEPHPMNNLLNYV--VPKMRPYACPVESCDRRFS--RS--DELTRHIRIHTGQKP---FQ 51
Query: 967 CKICHKTFLEKGSLAKHM 984
C+IC + F L H+
Sbjct: 52 CRICMRNFSRSDHLTTHI 69
Score = 40.8 bits (96), Expect = 2e-04
Identities = 13/47 (27%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Query: 575 CEKIFAAPKQMRMHLRHVHSSIKRYMCDICGKQFTTLSYLDLHRKSH 621
C++ F+ ++ H+R +H+ K + C IC + F+ +L H ++H
Sbjct: 27 CDRRFSRSDELTRHIR-IHTGQKPFQCRICMRNFSRSDHLTTHIRTH 72
Score = 40.4 bits (95), Expect = 2e-04
Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 9/64 (14%)
Query: 1532 THTGNKPYQCQI--CNKSFGTRRNYRLHLKRHKRSAGQLKPEDIHECKICHKIFLENSRL 1589
+PY C + C++ F +R + L RH R KP +C+IC + F + L
Sbjct: 13 VVPKMRPYACPVESCDRRF-SRSD---ELTRHIRIHTGQKP---FQCRICMRNFSRSDHL 65
Query: 1590 TRHM 1593
T H+
Sbjct: 66 TTHI 69
Score = 38.4 bits (90), Expect = 0.001
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 8/63 (12%)
Query: 1474 QKKYACDV--CGKQFTSTNRVSQHKAHSHFGIIKTIQRKFECDFCKKKFYRNFDLQEHIN 1531
+ YAC V C ++F+ ++ +++H H G Q+ F+C C + F R+ L HI
Sbjct: 17 MRPYACPVESCDRRFSRSDELTRHI-RIHTG-----QKPFQCRICMRNFSRSDHLTTHIR 70
Query: 1532 THT 1534
THT
Sbjct: 71 THT 73
Score = 35.7 bits (83), Expect = 0.010
Identities = 21/77 (27%), Positives = 35/77 (45%), Gaps = 8/77 (10%)
Query: 851 PKSMRKHLREVHSSQKKYVCDM--CGKQFTSNNRVSQHKAYSHFGIIKTIERKFECDYCK 908
P M L V + Y C + C ++F+ ++ +++H H G ++ F+C C
Sbjct: 3 PHPMNNLLNYVVPKMRPYACPVESCDRRFSRSDELTRHIR-IHTG-----QKPFQCRICM 56
Query: 909 MKFKSKSFLSEHINTHT 925
F L+ HI THT
Sbjct: 57 RNFSRSDHLTTHIRTHT 73
Score = 34.6 bits (80), Expect = 0.025
Identities = 14/59 (23%), Positives = 28/59 (47%), Gaps = 4/59 (6%)
Query: 655 IHTGIKEHQCHV--CNTAFYHIRSLSRHLKIHEYNESKMYKCPVCSKMFTELYEMKRHR 711
+ ++ + C V C+ F L+RH++IH K ++C +C + F+ + H
Sbjct: 13 VVPKMRPYACPVESCDRRFSRSDELTRHIRIHT--GQKPFQCRICMRNFSRSDHLTTHI 69
Score = 34.6 bits (80), Expect = 0.027
Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
Query: 1299 CPV--CHKTYSTPKTMRRHLRQVHTSQKRYLCDICGKQF 1335
CPV C + +S + RH+R HT QK + C IC + F
Sbjct: 22 CPVESCDRRFSRSDELTRHIRI-HTGQKPFQCRICMRNF 59
Score = 34.2 bits (79), Expect = 0.036
Identities = 18/68 (26%), Positives = 32/68 (47%), Gaps = 4/68 (5%)
Query: 387 HLRSVHNGKERKFICDI--CGKQFTSNIHASRHKNYAHSRDRQKMECDYCKRKFTCKRYL 444
+L + K R + C + C ++F+ + +RH H+ + +C C R F+ +L
Sbjct: 8 NLLNYVVPKMRPYACPVESCDRRFSRSDELTRHIR-IHTGQK-PFQCRICMRNFSRSDHL 65
Query: 445 AEHINAHT 452
HI HT
Sbjct: 66 TTHIRTHT 73
Score = 33.8 bits (78), Expect = 0.059
Identities = 13/45 (28%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Query: 374 CTKIFTTAKHMRVHLRSVHNGKERKFICDICGKQFTSNIHASRHK 418
C + F+ + + H+R H G ++ F C IC + F+ + H + H
Sbjct: 27 CDRRFSRSDELTRHIRI-HTG-QKPFQCRICMRNFSRSDHLTTHI 69
Score = 33.4 bits (77), Expect = 0.061
Identities = 15/51 (29%), Positives = 23/51 (45%), Gaps = 2/51 (3%)
Query: 678 SRHLKIHEYNESKMYKCPV--CSKMFTELYEMKRHRDHKHGGKCHVCKICG 726
+L + + + Y CPV C + F+ E+ RH G K C+IC
Sbjct: 6 MNNLLNYVVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICM 56
Score = 33.0 bits (76), Expect = 0.087
Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 6/64 (9%)
Query: 1319 VHTSQKRYLCDI--CGKQFTSTNRVNIHKACVHSSTGNK-FECIYCKKKYRRKFDLKEHI 1375
V + Y C + C ++F+ ++ + H TG K F+C C + + R L HI
Sbjct: 13 VVPKMRPYACPVESCDRRFSRSDELTRHI---RIHTGQKPFQCRICMRNFSRSDHLTTHI 69
Query: 1376 NKHT 1379
HT
Sbjct: 70 RTHT 73
Score = 31.1 bits (71), Expect = 0.43
Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 8/61 (13%)
Query: 1823 KKFKCDL--CQKQFKASRSLQCHKQFVHLGVHKPKFLNMECDYCSRKFPSKNEVTNHIKS 1880
+ + C + C ++F S L H + +H G KP +C C R F + +T HI++
Sbjct: 18 RPYACPVESCDRRFSRSDELTRHIR-IHTGQ-KP----FQCRICMRNFSRSDHLTTHIRT 71
Query: 1881 H 1881
H
Sbjct: 72 H 72
Score = 31.1 bits (71), Expect = 0.48
Identities = 15/54 (27%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Query: 1793 EKTKLCPV--CNKEYATPVTMRKHLREVHVSKKKFKCDLCQKQFKASRSLQCHK 1844
+ CPV C++ ++ + +H+R +H +K F+C +C + F S L H
Sbjct: 17 MRPYACPVESCDRRFSRSDELTRHIR-IHTGQKPFQCRICMRNFSRSDHLTTHI 69
Score = 30.7 bits (70), Expect = 0.67
Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 3/59 (5%)
Query: 421 AHSRDRQK-MECDY--CKRKFTCKRYLAEHINAHTGNTIYGCRICKKTFLYTNGLRRHI 476
+ + + C C R+F+ L HI HTG + CRIC + F ++ L HI
Sbjct: 11 NYVVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHI 69
Score = 30.0 bits (68), Expect = 1.2
Identities = 14/43 (32%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
Query: 108 CTEVFENLTLLRRHMRVKHPGEQNLPCRLCDMSFSNKYQKKKH 150
C F L RH+R H G++ CR+C +FS H
Sbjct: 27 CDRRFSRSDELTRHIR-IHTGQKPFQCRICMRNFSRSDHLTTH 68
Score = 29.2 bits (66), Expect = 2.2
Identities = 16/56 (28%), Positives = 25/56 (44%), Gaps = 5/56 (8%)
Query: 752 FHCD--TCGKYFRSRQICNKHIKRVHLNPTKTFKCDLCSDRFSTSAKLKKHVDKIH 805
+ C +C + F +H R+H K F+C +C FS S L H+ + H
Sbjct: 20 YACPVESCDRRFSRSDELTRH-IRIHTG-QKPFQCRICMRNFSRSDHLTTHI-RTH 72
Score = 28.4 bits (64), Expect = 4.7
Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 4/54 (7%)
Query: 256 FTCD--TCDKPFDTIEKCRRHAIRMHMNPCKMFKCDICVASFLTPHKLKTHIKT 307
+ C +CD+ F ++ RH IR+H K F+C IC+ +F L THI+T
Sbjct: 20 YACPVESCDRRFSRSDELTRH-IRIHTGQ-KPFQCRICMRNFSRSDHLTTHIRT 71
>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural
genomics, NPPSFA; NMR {Homo sapiens}
Length = 95
Score = 60.0 bits (145), Expect = 6e-11
Identities = 19/74 (25%), Positives = 25/74 (33%), Gaps = 10/74 (13%)
Query: 1013 HTGEKPFCCHICGKSL--KGNLKDHILKCHTGERPYKCDVC--------GSSFKDKWYLG 1062
+ C ++ L H+ H G VC G SFK K+ L
Sbjct: 20 DEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLV 79
Query: 1063 VHMRKHNGEKPYNC 1076
H+R H GEK
Sbjct: 80 NHIRVHTGEKSGPS 93
Score = 50.0 bits (119), Expect = 2e-07
Identities = 18/75 (24%), Positives = 27/75 (36%), Gaps = 3/75 (4%)
Query: 861 VHSSQKKYVCDMCGKQFTSNNRVSQHKAYSHFGIIKTIE---RKFECDYCKMKFKSKSFL 917
+ +Q C + F++ + + H H G + EC FK+K L
Sbjct: 19 IDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKL 78
Query: 918 SEHINTHTGNKPYQC 932
HI HTG K
Sbjct: 79 VNHIRVHTGEKSGPS 93
Score = 48.0 bits (114), Expect = 7e-07
Identities = 17/72 (23%), Positives = 23/72 (31%), Gaps = 11/72 (15%)
Query: 961 PEDIHECKICHKTFLEKGSLAKHMNWVH----GDKCHICKVCGAKIKG-------NLQKH 1009
+ K C +TF L H+ H H+C +G L H
Sbjct: 22 AQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNH 81
Query: 1010 MLSHTGEKPFCC 1021
+ HTGEK
Sbjct: 82 IRVHTGEKSGPS 93
Score = 47.7 bits (113), Expect = 1e-06
Identities = 17/73 (23%), Positives = 25/73 (34%), Gaps = 3/73 (4%)
Query: 1472 HSQKKYACDVCGKQFTSTNRVSQHKAHSHFGIIKTIQ---RKFECDFCKKKFYRNFDLQE 1528
+Q C + F++ + + H H G + EC K F + L
Sbjct: 21 EAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVN 80
Query: 1529 HINTHTGNKPYQC 1541
HI HTG K
Sbjct: 81 HIRVHTGEKSGPS 93
Score = 46.1 bits (109), Expect = 4e-06
Identities = 19/80 (23%), Positives = 30/80 (37%), Gaps = 8/80 (10%)
Query: 590 RHVHSSIKRYMCDICGKQFTTLSYLDLH-RKSHNETVKRKEEDKKY----ECDSCNKKFW 644
+ + + C + F+T+ L H H V E++ EC K F
Sbjct: 17 KWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEH---VGGPEQNNHVCYWEECPREGKSFK 73
Query: 645 SKRALSEHMIIHTGIKEHQC 664
+K L H+ +HTG K
Sbjct: 74 AKYKLVNHIRVHTGEKSGPS 93
Score = 45.7 bits (108), Expect = 5e-06
Identities = 14/73 (19%), Positives = 23/73 (31%), Gaps = 11/73 (15%)
Query: 1917 PLEDTYLCDLCSKVFLEHKDMIRHREWVH----GDKCHVCKVCGAKIKG-------NMKR 1965
+ + C + F +++ H H HVC +G +
Sbjct: 21 EAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVN 80
Query: 1966 HMLSHTGEKPFCC 1978
H+ HTGEK
Sbjct: 81 HIRVHTGEKSGPS 93
Score = 45.0 bits (106), Expect = 1e-05
Identities = 16/75 (21%), Positives = 27/75 (36%), Gaps = 7/75 (9%)
Query: 1319 VHTSQKRYLCDICGKQFTSTNRVNIHKACVHSSTGNK-------FECIYCKKKYRRKFDL 1371
+ +Q C + F++ + + H H + EC K ++ K+ L
Sbjct: 19 IDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKL 78
Query: 1372 KEHINKHTGNKPYHC 1386
HI HTG K
Sbjct: 79 VNHIRVHTGEKSGPS 93
Score = 40.0 bits (93), Expect = 6e-04
Identities = 13/66 (19%), Positives = 21/66 (31%), Gaps = 9/66 (13%)
Query: 1040 HTGERPYKCDVCGSSFKDKWYLGVHMRK-HNGEKPYNCDYC--------GQTFAARSTFT 1090
+ C +F L H+ H G N C G++F A+
Sbjct: 20 DEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLV 79
Query: 1091 FHLKKH 1096
H++ H
Sbjct: 80 NHIRVH 85
Score = 36.5 bits (84), Expect = 0.009
Identities = 15/69 (21%), Positives = 26/69 (37%), Gaps = 3/69 (4%)
Query: 1818 VHVSKKKFKCDLCQKQFKASRSLQCHKQFVHLGVHKPKFLN---MECDYCSRKFPSKNEV 1874
+ ++ C + F L H H+G + EC + F +K ++
Sbjct: 19 IDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKL 78
Query: 1875 TNHIKSHMG 1883
NHI+ H G
Sbjct: 79 VNHIRVHTG 87
Score = 35.7 bits (82), Expect = 0.022
Identities = 10/64 (15%), Positives = 19/64 (29%), Gaps = 2/64 (3%)
Query: 1532 THTGNKPYQCQICNKSFGTRRNYRLHLKRHKRSAGQLKPEDIH--ECKICHKIFLENSRL 1589
+ C+++F T H+ + + EC K F +L
Sbjct: 19 IDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKL 78
Query: 1590 TRHM 1593
H+
Sbjct: 79 VNHI 82
Score = 35.3 bits (81), Expect = 0.027
Identities = 14/67 (20%), Positives = 20/67 (29%), Gaps = 9/67 (13%)
Query: 1504 IKTIQRKFECDFCKKKFYRNFDLQEHIN-THTGNKPYQ--------CQICNKSFGTRRNY 1554
I Q C + F +L H+ H G C KSF +
Sbjct: 19 IDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKL 78
Query: 1555 RLHLKRH 1561
H++ H
Sbjct: 79 VNHIRVH 85
Score = 34.9 bits (80), Expect = 0.035
Identities = 15/66 (22%), Positives = 19/66 (28%), Gaps = 11/66 (16%)
Query: 1970 HTGEKPFCCDICGKSL--KGNLKAHILRC-QGERPYKCDVC--------GSSFKDKKHFS 2018
+ C ++ L H+ G VC G SFK K
Sbjct: 20 DEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLV 79
Query: 2019 VHIRNH 2024
HIR H
Sbjct: 80 NHIRVH 85
Score = 33.8 bits (77), Expect = 0.087
Identities = 21/85 (24%), Positives = 31/85 (36%), Gaps = 15/85 (17%)
Query: 317 YTFECQHCEDKFSTPFELNKHNESKHEKGRKLNPETGGYTYEEYKEVVVSKSKQCPLCTK 376
+ + C+ FST EL H +H GG + V ++CP K
Sbjct: 24 LSRPKKSCDRTFSTMHELVTHVTMEH---------VGGPEQNNH----VCYWEECPREGK 70
Query: 377 IFTTAKHMRVHLRSVHNGKERKFIC 401
F + H+R VH G E+
Sbjct: 71 SFKAKYKLVNHIR-VHTG-EKSGPS 93
Score = 32.2 bits (73), Expect = 0.35
Identities = 14/59 (23%), Positives = 23/59 (38%), Gaps = 9/59 (15%)
Query: 1860 ECDYCSRKFPSKNEVTNHI-KSHMGVRD--------ILCPICKKGFIALKHMKTHLKKH 1909
C R F + +E+ H+ H+G + CP K F A + H++ H
Sbjct: 27 PKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVH 85
Score = 31.9 bits (72), Expect = 0.40
Identities = 18/78 (23%), Positives = 27/78 (34%), Gaps = 10/78 (12%)
Query: 240 QSIEDPSLECK---NNKASFTCDTCDKPFDTIEKCRRHAIRMHMNP-------CKMFKCD 289
L CK + S +CD+ F T+ + H H+ C +C
Sbjct: 7 GQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECP 66
Query: 290 ICVASFLTPHKLKTHIKT 307
SF +KL HI+
Sbjct: 67 REGKSFKAKYKLVNHIRV 84
Score = 31.5 bits (71), Expect = 0.56
Identities = 17/66 (25%), Positives = 29/66 (43%), Gaps = 5/66 (7%)
Query: 126 HPGEQNLPCRLCDMSFSNKYQKKKHYSAFHKGMPFIPSFTC-----PICQKIFKNKEWYL 180
+ + P + CD +FS ++ H + H G P + C P K FK K +
Sbjct: 20 DEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLV 79
Query: 181 DHLSLH 186
+H+ +H
Sbjct: 80 NHIRVH 85
Score = 31.5 bits (71), Expect = 0.67
Identities = 12/58 (20%), Positives = 19/58 (32%), Gaps = 7/58 (12%)
Query: 367 KSKQCPLCTKIFTTAKHMRVHLRSVHNGKERK-------FICDICGKQFTSNIHASRH 417
S+ C + F+T + H+ H G + C GK F + H
Sbjct: 24 LSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNH 81
Score = 30.3 bits (68), Expect = 1.4
Identities = 13/63 (20%), Positives = 19/63 (30%), Gaps = 7/63 (11%)
Query: 655 IHTGIKEHQCHVCNTAFYHIRSLSRHL-KIH-EYNESKMYKC-----PVCSKMFTELYEM 707
I C+ F + L H+ H E + C P K F Y++
Sbjct: 19 IDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKL 78
Query: 708 KRH 710
H
Sbjct: 79 VNH 81
Score = 30.3 bits (68), Expect = 1.6
Identities = 17/94 (18%), Positives = 27/94 (28%), Gaps = 21/94 (22%)
Query: 777 NPTKTFKCDLCSDRFSTSAKLKKHVDKIHFTPEFQEPSKKNEPLDTGDYTLEQWNELVTA 836
+ C FST +L HV H Q
Sbjct: 21 EAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNH--------------------VC 60
Query: 837 QSKDCPVCHKTYSTPKSMRKHLREVHSSQKKYVC 870
++CP K++ + H+R VH+ +K
Sbjct: 61 YWEECPREGKSFKAKYKLVNHIR-VHTGEKSGPS 93
Score = 29.2 bits (65), Expect = 3.3
Identities = 10/57 (17%), Positives = 17/57 (29%), Gaps = 7/57 (12%)
Query: 752 FHCDTCGKYFRSRQICNKHIKRVHLN--PTKTFKC--DLCSDR---FSTSAKLKKHV 801
+C + F + H+ H+ C + C F KL H+
Sbjct: 26 RPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHI 82
Score = 29.2 bits (65), Expect = 4.2
Identities = 22/104 (21%), Positives = 34/104 (32%), Gaps = 30/104 (28%)
Query: 498 HLQSYQIKCRYCARTFSTQNDLKEHVSSVHMFMTESFENPNEPRVLNSNRYPLAIDGGLS 557
+ C RTFST ++L HV+ H+ GG
Sbjct: 20 DEAQLSRPKKSCDRTFSTMHELVTHVTMEHV-------------------------GGPE 54
Query: 558 LEEYQQIVATKSKQCPICEKIFAAPKQMRMHLRHVHSSIKRYMC 601
+ ++CP K F A ++ H+R VH+ K
Sbjct: 55 QNNHV----CYWEECPREGKSFKAKYKLVNHIR-VHTGEKSGPS 93
Score = 28.4 bits (63), Expect = 6.7
Identities = 19/102 (18%), Positives = 29/102 (28%), Gaps = 33/102 (32%)
Query: 687 NESKMYKCPVCSKMFTELYEMKRHRDHKHGG----KCHVCKICGATIKLFTELEEKEDSS 742
C + F+ ++E+ H +H G HVC
Sbjct: 21 EAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEE---------------- 64
Query: 743 FERKKSKDSFHCDTCGKYFRSRQICNKHIKRVHLNPTKTFKC 784
C GK F+++ HI RVH K+
Sbjct: 65 -----------CPREGKSFKAKYKLVNHI-RVH-TGEKSGPS 93
Score = 28.0 bits (62), Expect = 8.4
Identities = 13/58 (22%), Positives = 16/58 (27%), Gaps = 9/58 (15%)
Query: 430 ECDYCKRKFTCKRYLAEHIN-AHTGNTIY--------GCRICKKTFLYTNGLRRHILS 478
C R F+ L H+ H G C K+F L HI
Sbjct: 27 PKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRV 84
Score = 28.0 bits (62), Expect = 9.0
Identities = 14/58 (24%), Positives = 22/58 (37%), Gaps = 4/58 (6%)
Query: 284 KMFKCDICVASFLTPHKLKTHIKTKHRTQLKEL----YTFECQHCEDKFSTPFELNKH 337
C +F T H+L TH+ +H ++ Y EC F ++L H
Sbjct: 24 LSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNH 81
>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 115
Score = 60.2 bits (145), Expect = 7e-11
Identities = 19/98 (19%), Positives = 31/98 (31%), Gaps = 6/98 (6%)
Query: 1005 NLQKHMLSHTGEKPFCCHICGKS--LKGNLKDHIL----KCHTGERPYKCDVCGSSFKDK 1058
+ + + TG F C C + L H+ + S K
Sbjct: 6 SGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRK 65
Query: 1059 WYLGVHMRKHNGEKPYNCDYCGQTFAARSTFTFHLKKH 1096
L K + +K C YCG +F + + H+ K
Sbjct: 66 RSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKT 103
Score = 55.9 bits (134), Expect = 2e-09
Identities = 18/102 (17%), Positives = 36/102 (35%), Gaps = 2/102 (1%)
Query: 592 VHSSIKRYMCDICGKQFTTLSYLDLHRKSHNETVKRKEEDKKYECDSCNKKFWSKRALSE 651
+ + ++ C C + TL L +H R + + + KR+L E
Sbjct: 13 IFTGASKFRCKDCSAAYDTLVELTVHMNETGH--YRDDNHETDNNNPKRWSKPRKRSLLE 70
Query: 652 HMIIHTGIKEHQCHVCNTAFYHIRSLSRHLKIHEYNESKMYK 693
K +C C +F ++ LS H+ ++ +
Sbjct: 71 MEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTKHYQKVSGP 112
Score = 54.0 bits (129), Expect = 1e-08
Identities = 16/105 (15%), Positives = 35/105 (33%), Gaps = 3/105 (2%)
Query: 1459 STPRQMRIHLREAHSQKKYACDVCGKQFTSTNRVSQH-KAHSHFGIIKTIQRKFECDFCK 1517
S+ +++ K+ C C + + ++ H H+ + +
Sbjct: 2 SSGSSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYR--DDNHETDNNNPKR 59
Query: 1518 KKFYRNFDLQEHINTHTGNKPYQCQICNKSFGTRRNYRLHLKRHK 1562
R L E K +C C SF + ++ +H+ + K
Sbjct: 60 WSKPRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTK 104
Score = 51.7 bits (123), Expect = 7e-08
Identities = 20/98 (20%), Positives = 34/98 (34%), Gaps = 12/98 (12%)
Query: 892 FGIIKTIERKFECDYCKMKFKSKSFLSEHIN-----THTGNKPYQCQICKKSFANKRSYQ 946
+G I T KF C C + + L+ H+N ++ + S KRS
Sbjct: 10 YGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLL 69
Query: 947 RDLKRHKQLAGQLKPEDIHECKICHKTFLEKGSLAKHM 984
+ + + +C C +F L+ HM
Sbjct: 70 EMEGKED-------AQKVLKCMYCGHSFESLQDLSVHM 100
Score = 51.7 bits (123), Expect = 9e-08
Identities = 20/113 (17%), Positives = 36/113 (31%), Gaps = 10/113 (8%)
Query: 913 SKSFLSEHINTHTGNKPYQCQICKKSFANKRSYQRDLKRHKQLAG--QLKPEDIHECKIC 970
S S + + TG ++C+ C ++ +L H G + +
Sbjct: 3 SGSSGKLYGSIFTGASKFRCKDCSAAYDTLV----ELTVHMNETGHYRDDNHETDNNNPK 58
Query: 971 HKTFLEKGSLAKHMNWVHGDKCHICKVCGA--KIKGNLQKHML--SHTGEKPF 1019
+ K SL + K C CG + +L HM+ H +
Sbjct: 59 RWSKPRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTKHYQKVSG 111
Score = 50.5 bits (120), Expect = 2e-07
Identities = 19/102 (18%), Positives = 32/102 (31%), Gaps = 12/102 (11%)
Query: 1501 FGIIKTIQRKFECDFCKKKFYRNFDLQEHIN-----THTGNKPYQCQICNKSFGTRRNYR 1555
+G I T KF C C + +L H+N ++ S +R+
Sbjct: 10 YGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLL 69
Query: 1556 LHLKRHKRSAGQLKPEDIHECKICHKIFLENSRLTRHMNFTH 1597
+ + + +C C F L+ HM T
Sbjct: 70 EMEGKED-------AQKVLKCMYCGHSFESLQDLSVHMIKTK 104
Score = 47.5 bits (112), Expect = 3e-06
Identities = 23/107 (21%), Positives = 31/107 (28%), Gaps = 10/107 (9%)
Query: 979 SLAKHMNWVHGDKCHICKVCGA--KIKGNLQKHM--LSHTGEKPFCCHICGKSLKGNLKD 1034
S + + G CK C A L HM H + +
Sbjct: 6 SGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRK 65
Query: 1035 HIL----KCHTGERPYKCDVCGSSFKDKWYLGVHMRK--HNGEKPYN 1075
L ++ KC CG SF+ L VHM K H +
Sbjct: 66 RSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTKHYQKVSGP 112
Score = 47.1 bits (111), Expect = 3e-06
Identities = 17/105 (16%), Positives = 35/105 (33%), Gaps = 5/105 (4%)
Query: 379 TTAKHMRVHLRSVHNGKERKFICDICGKQFTSNIHASRHKNYAH---SRDRQKMECDYCK 435
++ +++ S+ G KF C C + + + + H N + + + +
Sbjct: 2 SSGSSGKLY-GSIFTG-ASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKR 59
Query: 436 RKFTCKRYLAEHINAHTGNTIYGCRICKKTFLYTNGLRRHILSRH 480
KR L E + C C +F L H++
Sbjct: 60 WSKPRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTK 104
Score = 46.3 bits (109), Expect = 5e-06
Identities = 21/125 (16%), Positives = 38/125 (30%), Gaps = 32/125 (25%)
Query: 1371 LKEHINKHTGNKPYHCQICKESFYTLKTYRGDLKRHEQLAEQSDEMHSTSKFQNKIKKPL 1430
K + + TG + C+ C ++ TL +L H M+ T +++ +
Sbjct: 7 GKLYGSIFTGASKFRCKDCSAAYDTL----VELTVH---------MNETGHYRDDNHET- 52
Query: 1431 DTGDLSWEEWNELVLSGTKKCPVCHKTYSTPRQMRIHLREAHSQKKYACDVCGKQFTSTN 1490
+ R + + +QK C CG F S
Sbjct: 53 ------------------DNNNPKRWSKPRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQ 94
Query: 1491 RVSQH 1495
+S H
Sbjct: 95 DLSVH 99
Score = 45.1 bits (106), Expect = 2e-05
Identities = 14/96 (14%), Positives = 29/96 (30%), Gaps = 3/96 (3%)
Query: 859 REVHSSQKKYVCDMCGKQFTSNNRVSQH-KAYSHFGIIKTIERKFECDYCKMKFKSKSFL 917
+ + K+ C C + + ++ H H+ + + K L
Sbjct: 11 GSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYR--DDNHETDNNNPKRWSKPRKRSL 68
Query: 918 SEHINTHTGNKPYQCQICKKSFANKRSYQRDLKRHK 953
E K +C C SF + + + + K
Sbjct: 69 LEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTK 104
Score = 44.0 bits (103), Expect = 4e-05
Identities = 14/94 (14%), Positives = 25/94 (26%), Gaps = 1/94 (1%)
Query: 1816 REVHVSKKKFKCDLCQKQFKASRSLQCHKQFVHLGVHKPKFLNMECDYCSRKFPSKNEVT 1875
+ KF+C C + L H + P K +
Sbjct: 11 GSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNH-ETDNNNPKRWSKPRKRSLL 69
Query: 1876 NHIKSHMGVRDILCPICKKGFIALKHMKTHLKKH 1909
+ + C C F +L+ + H+ K
Sbjct: 70 EMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKT 103
Score = 44.0 bits (103), Expect = 4e-05
Identities = 20/93 (21%), Positives = 30/93 (32%), Gaps = 7/93 (7%)
Query: 1317 RQVHTSQKRYLCDICGKQFTSTNRVNIH-KACVHSSTGN--KFECIYCKKKYRRKFDLKE 1373
+ T ++ C C + + + +H H N + RK L E
Sbjct: 11 GSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLE 70
Query: 1374 HINKHTGNKPYHCQICKESFYTLKTYRGDLKRH 1406
K K C C SF +L+ DL H
Sbjct: 71 MEGKEDAQKVLKCMYCGHSFESLQ----DLSVH 99
Score = 43.6 bits (102), Expect = 6e-05
Identities = 21/94 (22%), Positives = 31/94 (32%), Gaps = 9/94 (9%)
Query: 1940 HREWVHGDKCHVCKVCGA--KIKGNMKRHM--LSHTGEKPFCCDICG-----KSLKGNLK 1990
+ G CK C A + HM H + D K K +L
Sbjct: 10 YGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLL 69
Query: 1991 AHILRCQGERPYKCDVCGSSFKDKKHFSVHIRNH 2024
+ ++ KC CG SF+ + SVH+
Sbjct: 70 EMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKT 103
Score = 43.2 bits (101), Expect = 7e-05
Identities = 13/89 (14%), Positives = 28/89 (31%), Gaps = 3/89 (3%)
Query: 652 HMIIHTGIKEHQCHVCNTAFYHIRSLSRHLKIH---EYNESKMYKCPVCSKMFTELYEMK 708
+ I TG + +C C+ A+ + L+ H+ + + +
Sbjct: 10 YGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLL 69
Query: 709 RHRDHKHGGKCHVCKICGATIKLFTELEE 737
+ K C CG + + +L
Sbjct: 70 EMEGKEDAQKVLKCMYCGHSFESLQDLSV 98
Score = 40.9 bits (95), Expect = 5e-04
Identities = 14/111 (12%), Positives = 30/111 (27%), Gaps = 6/111 (5%)
Query: 1870 SKNEVTNHIKSHMGVRDILCPICKKGFIALKHMKTHLKKHMWKAGEIPLEDTYLCDLCSK 1929
S + + G C C + L + H+ + +T +
Sbjct: 3 SGSSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNET--GHYRDDNHETDNNNPKRW 60
Query: 1930 VFLEHKDMIRHREWVHGDKCHVCKVCGA--KIKGNMKRHML--SHTGEKPF 1976
+ ++ K C CG + ++ HM+ H +
Sbjct: 61 SKPRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTKHYQKVSG 111
Score = 40.9 bits (95), Expect = 5e-04
Identities = 16/92 (17%), Positives = 29/92 (31%), Gaps = 3/92 (3%)
Query: 571 QCPICEKIFAAPKQMRMHLRHVHSSIKRYMCDICGKQFTTLSYLDLHRKSHNETVKRKEE 630
+C C + ++ +H+ R R E +++
Sbjct: 21 RCKDCSAAYDTLVELTVHMNETGH--YRDDNHETDNNNPKRWSKPRKRSLL-EMEGKEDA 77
Query: 631 DKKYECDSCNKKFWSKRALSEHMIIHTGIKEH 662
K +C C F S + LS HMI ++
Sbjct: 78 QKVLKCMYCGHSFESLQDLSVHMIKTKHYQKV 109
Score = 40.1 bits (93), Expect = 8e-04
Identities = 14/84 (16%), Positives = 28/84 (33%), Gaps = 2/84 (2%)
Query: 1798 CPVCNKEYATPVTMRKHLREVHVSKKKFKCDLCQKQFKASRSLQCHKQFVHLGVHKPKFL 1857
C C+ Y T V + H+ E + S + + + +
Sbjct: 22 CKDCSAAYDTLVELTVHMNETG--HYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQK 79
Query: 1858 NMECDYCSRKFPSKNEVTNHIKSH 1881
++C YC F S +++ H+
Sbjct: 80 VLKCMYCGHSFESLQDLSVHMIKT 103
Score = 39.7 bits (92), Expect = 0.001
Identities = 12/74 (16%), Positives = 18/74 (24%), Gaps = 7/74 (9%)
Query: 1962 NMKRHMLSHTGEKPFCCDICGKS--LKGNLKAHI-----LRCQGERPYKCDVCGSSFKDK 2014
+ K + TG F C C + L H+ R + S K
Sbjct: 6 SGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRK 65
Query: 2015 KHFSVHIRNHGEDK 2028
+ K
Sbjct: 66 RSLLEMEGKEDAQK 79
Score = 39.4 bits (91), Expect = 0.001
Identities = 18/90 (20%), Positives = 27/90 (30%), Gaps = 4/90 (4%)
Query: 1299 CPVCHKTYSTPKTMRRHLRQV-HTSQKRYLCDICGKQFTSTNRVNIHKACVHSSTGNK-F 1356
C C Y T + H+ + H + D + S R K
Sbjct: 22 CKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKVL 81
Query: 1357 ECIYCKKKYRRKFDLKEHI--NKHTGNKPY 1384
+C+YC + DL H+ KH
Sbjct: 82 KCMYCGHSFESLQDLSVHMIKTKHYQKVSG 111
Score = 37.8 bits (87), Expect = 0.006
Identities = 15/91 (16%), Positives = 32/91 (35%), Gaps = 3/91 (3%)
Query: 370 QCPLCTKIFTTAKHMRVHLRSVHNGKERKFICDICGKQFTS-NIHASRHKNYAHSRDRQK 428
+C C+ + T + VH+ + ++ D + S S + ++
Sbjct: 21 RCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKV 80
Query: 429 MECDYCKRKFTCKRYLAEHI--NAHTGNTIY 457
++C YC F + L+ H+ H
Sbjct: 81 LKCMYCGHSFESLQDLSVHMIKTKHYQKVSG 111
Score = 36.3 bits (83), Expect = 0.017
Identities = 5/38 (13%), Positives = 11/38 (28%)
Query: 1061 LGVHMRKHNGEKPYNCDYCGQTFAARSTFTFHLKKHEE 1098
++ G + C C + T H+ +
Sbjct: 7 GKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGH 44
Score = 35.1 bits (80), Expect = 0.047
Identities = 15/114 (13%), Positives = 31/114 (27%), Gaps = 22/114 (19%)
Query: 283 CKMFKCDICVASFLTPHKLKTHIKTKHRTQLKELYTFECQHCEDKFSTPFELNKHNESKH 342
F+C C A++ T +L H+ + T L + +
Sbjct: 17 ASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKED 76
Query: 343 EKGRKLNPETGGYTYEEYKEVVVSKSKQCPLCTKIFTTAKHMRVHLRSVHNGKE 396
K +C C F + + + VH+ + ++
Sbjct: 77 ----------------------AQKVLKCMYCGHSFESLQDLSVHMIKTKHYQK 108
Score = 34.7 bits (79), Expect = 0.070
Identities = 19/107 (17%), Positives = 34/107 (31%), Gaps = 25/107 (23%)
Query: 780 KTFKCDLCSDRFSTSAKLKKHVDKIHFTPEFQEPSKKNEPLDTGDYTLEQWNELVTAQSK 839
F+C CS + T +L H+++ + + N P
Sbjct: 18 SKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNP-------------------- 57
Query: 840 DCPVCHKTYSTPKSMRKHLREVHSSQKKYVCDMCGKQFTSNNRVSQH 886
+ +S+ + + +QK C CG F S +S H
Sbjct: 58 ----KRWSKPRKRSLLEMEGK-EDAQKVLKCMYCGHSFESLQDLSVH 99
Score = 34.4 bits (78), Expect = 0.097
Identities = 13/149 (8%), Positives = 35/149 (23%), Gaps = 51/149 (34%)
Query: 1526 LQEHINTHTGNKPYQCQICNKSFGTRRNYRLHLKRHKRSAGQLKPEDIHECKICHKIFLE 1585
+ + + TG ++C+ C+ ++ T +H+ + +
Sbjct: 7 GKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYR--------DDNHETDNNNPK 58
Query: 1586 NSRLTRHMNFTHGDKCHGATNSTDKIFRDADSIVHPNSTVWAKRLITELKEDEYSSLKRA 1645
R + + A
Sbjct: 59 RWSKPRKRSLLEMEGKEDA----------------------------------------- 77
Query: 1646 ISKGSFKCGICGKCYKTREKCRRHIKRIH 1674
+ KC CG +++ + H+ +
Sbjct: 78 --QKVLKCMYCGHSFESLQDLSVHMIKTK 104
Score = 33.6 bits (76), Expect = 0.16
Identities = 14/99 (14%), Positives = 35/99 (35%), Gaps = 2/99 (2%)
Query: 255 SFTCDTCDKPFDTIEKCRRHAIRMHMNPCKMFKCDICVASFLTPHKLKTHIKTKHRTQLK 314
F C C +DT+ + H + D + + ++ ++ + + +
Sbjct: 19 KFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQ 78
Query: 315 ELYTFECQHCEDKFSTPFELNKHNESKHEKGRKLNPETG 353
++ C +C F + +L+ H + P +G
Sbjct: 79 KVLK--CMYCGHSFESLQDLSVHMIKTKHYQKVSGPSSG 115
Score = 32.4 bits (73), Expect = 0.41
Identities = 18/86 (20%), Positives = 35/86 (40%), Gaps = 5/86 (5%)
Query: 505 KCRYCARTFSTQNDLKEHVSSVHMFMTESFENPNEPRVLNSNRYPLAIDGGLSLEEYQQI 564
+C+ C+ + T +L +VHM T + + N N+ + LE +
Sbjct: 21 RCKDCSAAYDTLVEL-----TVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKE 75
Query: 565 VATKSKQCPICEKIFAAPKQMRMHLR 590
A K +C C F + + + +H+
Sbjct: 76 DAQKVLKCMYCGHSFESLQDLSVHMI 101
Score = 31.7 bits (71), Expect = 0.69
Identities = 14/81 (17%), Positives = 27/81 (33%), Gaps = 2/81 (2%)
Query: 104 TCRICTEVFENLTLLRRHMRV-KHPGEQNLPCRLCDMSFSNKYQKKKHYSAFHKGMPFIP 162
C+ C+ ++ L L HM H + N + +K +K+
Sbjct: 21 RCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEM-EGKEDAQK 79
Query: 163 SFTCPICQKIFKNKEWYLDHL 183
C C F++ + H+
Sbjct: 80 VLKCMYCGHSFESLQDLSVHM 100
Score = 31.3 bits (70), Expect = 1.00
Identities = 20/133 (15%), Positives = 39/133 (29%), Gaps = 33/133 (24%)
Query: 676 SLSRHLKIHEYNESKM--YKCPVCSKMFTELYEMKRH-RDHKHGGKCHVCKICGATIKLF 732
S K++ + ++C CS + L E+ H + H +
Sbjct: 2 SSGSSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGH----------------Y 45
Query: 733 TELEEKEDSSFERKKSKDSFHCDTCGKYFRSRQICNKHIKRVHLNPTKTFKCDLCSDRFS 792
+ + D++ ++ SK + + K KC C F
Sbjct: 46 RDDNHETDNNNPKRWSKPRKR--------------SLLEMEGKEDAQKVLKCMYCGHSFE 91
Query: 793 TSAKLKKHVDKIH 805
+ L H+ K
Sbjct: 92 SLQDLSVHMIKTK 104
Score = 30.9 bits (69), Expect = 1.3
Identities = 11/117 (9%), Positives = 31/117 (26%), Gaps = 26/117 (22%)
Query: 751 SFHCDTCGKYFRSRQICNKHIKRVHLNPTKTFKCDLCSDRFSTSAKLKKHVDKIHFTPEF 810
F C C + + H+ + D + + + + + ++
Sbjct: 19 KFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEM------- 71
Query: 811 QEPSKKNEPLDTGDYTLEQWNELVTAQSKDCPVCHKTYSTPKSMRKHLREVHSSQKK 867
+ + L C C ++ + + + H+ + QK
Sbjct: 72 EGKEDAQKVL-------------------KCMYCGHSFESLQDLSVHMIKTKHYQKV 109
>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 57.9 bits (141), Expect = 7e-11
Identities = 15/37 (40%), Positives = 22/37 (59%)
Query: 1040 HTGERPYKCDVCGSSFKDKWYLGVHMRKHNGEKPYNC 1076
+GERP+KC+ CG F + +L H+R H+ EK
Sbjct: 7 GSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGP 43
Score = 48.3 bits (116), Expect = 2e-07
Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
Query: 1008 KHMLSHTGEKPFCCHICGK--SLKGNLKDHILKCHTGERPYKC 1048
S +GE+PF C+ CGK + +L H L+ H+ E+
Sbjct: 2 SSGSSGSGERPFKCNECGKGFGRRSHLAGH-LRLHSREKSSGP 43
Score = 40.6 bits (96), Expect = 9e-05
Identities = 12/42 (28%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Query: 1965 RHMLSHTGEKPFCCDICGK--SLKGNLKAHILRCQGERPYKC 2004
S +GE+PF C+ CGK + +L H+ E+
Sbjct: 2 SSGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGP 43
Score = 40.6 bits (96), Expect = 9e-05
Identities = 13/35 (37%), Positives = 19/35 (54%)
Query: 1062 GVHMRKHNGEKPYNCDYCGQTFAARSTFTFHLKKH 1096
G +GE+P+ C+ CG+ F RS HL+ H
Sbjct: 1 GSSGSSGSGERPFKCNECGKGFGRRSHLAGHLRLH 35
Score = 39.4 bits (93), Expect = 3e-04
Identities = 11/35 (31%), Positives = 17/35 (48%), Gaps = 4/35 (11%)
Query: 1529 HINTHTGNKPYQCQICNKSFGTRRNYRLHLKRHKR 1563
++ +G +P++C C K F R HL H R
Sbjct: 3 SGSSGSGERPFKCNECGKGF----GRRSHLAGHLR 33
Score = 39.1 bits (92), Expect = 3e-04
Identities = 11/36 (30%), Positives = 18/36 (50%)
Query: 897 TIERKFECDYCKMKFKSKSFLSEHINTHTGNKPYQC 932
+ ER F+C+ C F +S L+ H+ H+ K
Sbjct: 8 SGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGP 43
Score = 39.1 bits (92), Expect = 4e-04
Identities = 10/31 (32%), Positives = 14/31 (45%)
Query: 1511 FECDFCKKKFYRNFDLQEHINTHTGNKPYQC 1541
F+C+ C K F R L H+ H+ K
Sbjct: 13 FKCNECGKGFGRRSHLAGHLRLHSREKSSGP 43
Score = 38.7 bits (91), Expect = 5e-04
Identities = 14/30 (46%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Query: 1998 GERPYKCDVCGSSFKDKKHFSVHIRNH-GE 2026
GERP+KC+ CG F + H + H+R H E
Sbjct: 9 GERPFKCNECGKGFGRRSHLAGHLRLHSRE 38
Score = 35.2 bits (82), Expect = 0.009
Identities = 10/36 (27%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Query: 1352 TGNK-FECIYCKKKYRRKFDLKEHINKHTGNKPYHC 1386
+G + F+C C K + R+ L H+ H+ K
Sbjct: 8 SGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGP 43
Score = 34.0 bits (79), Expect = 0.024
Identities = 6/23 (26%), Positives = 13/23 (56%)
Query: 920 HINTHTGNKPYQCQICKKSFANK 942
++ +G +P++C C K F +
Sbjct: 3 SGSSGSGERPFKCNECGKGFGRR 25
Score = 33.3 bits (77), Expect = 0.038
Identities = 8/33 (24%), Positives = 17/33 (51%)
Query: 632 KKYECDSCNKKFWSKRALSEHMIIHTGIKEHQC 664
+ ++C+ C K F + L+ H+ +H+ K
Sbjct: 11 RPFKCNECGKGFGRRSHLAGHLRLHSREKSSGP 43
Score = 31.4 bits (72), Expect = 0.17
Identities = 12/47 (25%), Positives = 19/47 (40%), Gaps = 7/47 (14%)
Query: 592 VHSSIKRYMCDICGKQFTTLSYLDLHRKSHNETVKRKEEDKKYECDS 638
S + + C+ CGK F S+L H + H+ +K S
Sbjct: 6 SGSGERPFKCNECGKGFGRRSHLAGHLRLHS-------REKSSGPSS 45
Score = 31.0 bits (71), Expect = 0.26
Identities = 9/35 (25%), Positives = 15/35 (42%), Gaps = 2/35 (5%)
Query: 989 GDKCHICKVCGA--KIKGNLQKHMLSHTGEKPFCC 1021
G++ C CG + +L H+ H+ EK
Sbjct: 9 GERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGP 43
Score = 30.2 bits (69), Expect = 0.48
Identities = 9/43 (20%), Positives = 17/43 (39%), Gaps = 2/43 (4%)
Query: 652 HMIIHTGIKEHQCHVCNTAFYHIRSLSRHLKIHEYNESKMYKC 694
+G + +C+ C F L+ HL++H + K
Sbjct: 3 SGSSGSGERPFKCNECGKGFGRRSHLAGHLRLH--SREKSSGP 43
Score = 28.3 bits (64), Expect = 2.6
Identities = 8/35 (22%), Positives = 15/35 (42%), Gaps = 2/35 (5%)
Query: 1946 GDKCHVCKVCGA--KIKGNMKRHMLSHTGEKPFCC 1978
G++ C CG + ++ H+ H+ EK
Sbjct: 9 GERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGP 43
Score = 28.3 bits (64), Expect = 2.7
Identities = 12/29 (41%), Positives = 15/29 (51%), Gaps = 1/29 (3%)
Query: 389 RSVHNGKERKFICDICGKQFTSNIHASRH 417
S +G ER F C+ CGK F H + H
Sbjct: 4 GSSGSG-ERPFKCNECGKGFGRRSHLAGH 31
Score = 27.5 bits (62), Expect = 5.1
Identities = 8/33 (24%), Positives = 13/33 (39%), Gaps = 4/33 (12%)
Query: 1374 HINKHTGNKPYHCQICKESFYTLKTYRGDLKRH 1406
+ +G +P+ C C + F R L H
Sbjct: 3 SGSSGSGERPFKCNECGKGF----GRRSHLAGH 31
Score = 26.7 bits (60), Expect = 7.6
Identities = 8/30 (26%), Positives = 15/30 (50%)
Query: 430 ECDYCKRKFTCKRYLAEHINAHTGNTIYGC 459
+C+ C + F + +LA H+ H+ G
Sbjct: 14 KCNECGKGFGRRSHLAGHLRLHSREKSSGP 43
>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 57.6 bits (140), Expect = 9e-11
Identities = 19/37 (51%), Positives = 23/37 (62%)
Query: 1040 HTGERPYKCDVCGSSFKDKWYLGVHMRKHNGEKPYNC 1076
GE+PY C CG +F K YL +HMR H+GEKP
Sbjct: 7 GAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGP 43
Score = 42.9 bits (102), Expect = 1e-05
Identities = 16/42 (38%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Query: 1965 RHMLSHTGEKPFCCDICGK--SLKGNLKAHILRCQGERPYKC 2004
S GEKP+ C CGK S K L H+ GE+P
Sbjct: 2 SSGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGP 43
Score = 42.2 bits (100), Expect = 2e-05
Identities = 13/35 (37%), Positives = 19/35 (54%)
Query: 1062 GVHMRKHNGEKPYNCDYCGQTFAARSTFTFHLKKH 1096
G GEKPY C CG+ F+++S H++ H
Sbjct: 1 GSSGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTH 35
Score = 40.2 bits (95), Expect = 2e-04
Identities = 14/38 (36%), Positives = 19/38 (50%)
Query: 895 IKTIERKFECDYCKMKFKSKSFLSEHINTHTGNKPYQC 932
E+ + C C F SKS+L H+ TH+G KP
Sbjct: 6 SGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGP 43
Score = 37.9 bits (89), Expect = 8e-04
Identities = 11/31 (35%), Positives = 14/31 (45%)
Query: 1511 FECDFCKKKFYRNFDLQEHINTHTGNKPYQC 1541
+ C C K F L H+ TH+G KP
Sbjct: 13 YGCSECGKAFSSKSYLIIHMRTHSGEKPSGP 43
Score = 36.0 bits (84), Expect = 0.005
Identities = 14/30 (46%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Query: 1998 GERPYKCDVCGSSFKDKKHFSVHIRNH-GE 2026
GE+PY C CG +F K + +H+R H GE
Sbjct: 9 GEKPYGCSECGKAFSSKSYLIIHMRTHSGE 38
Score = 36.0 bits (84), Expect = 0.005
Identities = 11/35 (31%), Positives = 17/35 (48%), Gaps = 4/35 (11%)
Query: 1529 HINTHTGNKPYQCQICNKSFGTRRNYRLHLKRHKR 1563
++ G KPY C C K+F + + +L H R
Sbjct: 3 SGSSGAGEKPYGCSECGKAF----SSKSYLIIHMR 33
Score = 33.7 bits (78), Expect = 0.025
Identities = 9/23 (39%), Positives = 14/23 (60%)
Query: 920 HINTHTGNKPYQCQICKKSFANK 942
++ G KPY C C K+F++K
Sbjct: 3 SGSSGAGEKPYGCSECGKAFSSK 25
Score = 33.7 bits (78), Expect = 0.026
Identities = 14/33 (42%), Positives = 15/33 (45%)
Query: 632 KKYECDSCNKKFWSKRALSEHMIIHTGIKEHQC 664
K Y C C K F SK L HM H+G K
Sbjct: 11 KPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGP 43
Score = 33.7 bits (78), Expect = 0.027
Identities = 12/36 (33%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
Query: 1352 TGNK-FECIYCKKKYRRKFDLKEHINKHTGNKPYHC 1386
G K + C C K + K L H+ H+G KP
Sbjct: 8 AGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGP 43
Score = 32.1 bits (74), Expect = 0.087
Identities = 10/43 (23%), Positives = 14/43 (32%), Gaps = 2/43 (4%)
Query: 652 HMIIHTGIKEHQCHVCNTAFYHIRSLSRHLKIHEYNESKMYKC 694
G K + C C AF L H++ H + K
Sbjct: 3 SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTH--SGEKPSGP 43
Score = 31.0 bits (71), Expect = 0.29
Identities = 12/34 (35%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 588 HLRHVHSSIKRYMCDICGKQFTTLSYLDLHRKSH 621
+ K Y C CGK F++ SYL +H ++H
Sbjct: 3 SGS-SGAGEKPYGCSECGKAFSSKSYLIIHMRTH 35
Score = 30.6 bits (70), Expect = 0.36
Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
Query: 989 GDKCHICKVCGAKI--KGNLQKHMLSHTGEKPFCC 1021
G+K + C CG K L HM +H+GEKP
Sbjct: 9 GEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGP 43
Score = 29.4 bits (67), Expect = 0.90
Identities = 10/30 (33%), Positives = 14/30 (46%)
Query: 430 ECDYCKRKFTCKRYLAEHINAHTGNTIYGC 459
C C + F+ K YL H+ H+G G
Sbjct: 14 GCSECGKAFSSKSYLIIHMRTHSGEKPSGP 43
Score = 27.9 bits (63), Expect = 3.3
Identities = 13/35 (37%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
Query: 1946 GDKCHVCKVCGAKI--KGNMKRHMLSHTGEKPFCC 1978
G+K + C CG K + HM +H+GEKP
Sbjct: 9 GEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGP 43
>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 44
Score = 57.5 bits (140), Expect = 9e-11
Identities = 16/37 (43%), Positives = 22/37 (59%)
Query: 1040 HTGERPYKCDVCGSSFKDKWYLGVHMRKHNGEKPYNC 1076
TG +PY C+ CG +F+ K YL +H R H GE +
Sbjct: 7 GTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43
Score = 42.9 bits (102), Expect = 1e-05
Identities = 12/35 (34%), Positives = 17/35 (48%)
Query: 1062 GVHMRKHNGEKPYNCDYCGQTFAARSTFTFHLKKH 1096
G G KPY C+ CG+ F ++S H + H
Sbjct: 1 GSSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTH 35
Score = 42.1 bits (100), Expect = 2e-05
Identities = 14/42 (33%), Positives = 16/42 (38%), Gaps = 2/42 (4%)
Query: 1965 RHMLSHTGEKPFCCDICGK--SLKGNLKAHILRCQGERPYKC 2004
S TG KP+ C+ CGK K L H GE
Sbjct: 2 SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43
Score = 39.4 bits (93), Expect = 3e-04
Identities = 13/36 (36%), Positives = 18/36 (50%)
Query: 897 TIERKFECDYCKMKFKSKSFLSEHINTHTGNKPYQC 932
T + + C+ C F+SKS+L H THTG
Sbjct: 8 TGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43
Score = 38.2 bits (90), Expect = 6e-04
Identities = 10/31 (32%), Positives = 12/31 (38%)
Query: 1511 FECDFCKKKFYRNFDLQEHINTHTGNKPYQC 1541
+ C+ C K F L H THTG
Sbjct: 13 YVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43
Score = 36.7 bits (86), Expect = 0.002
Identities = 12/35 (34%), Positives = 17/35 (48%), Gaps = 4/35 (11%)
Query: 1529 HINTHTGNKPYQCQICNKSFGTRRNYRLHLKRHKR 1563
++ TG KPY C C K+F + +L H R
Sbjct: 3 SGSSGTGMKPYVCNECGKAF----RSKSYLIIHTR 33
Score = 36.3 bits (85), Expect = 0.003
Identities = 13/30 (43%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Query: 1998 GERPYKCDVCGSSFKDKKHFSVHIRNH-GE 2026
G +PY C+ CG +F+ K + +H R H GE
Sbjct: 9 GMKPYVCNECGKAFRSKSYLIIHTRTHTGE 38
Score = 35.9 bits (84), Expect = 0.005
Identities = 13/33 (39%), Positives = 14/33 (42%)
Query: 632 KKYECDSCNKKFWSKRALSEHMIIHTGIKEHQC 664
K Y C+ C K F SK L H HTG
Sbjct: 11 KPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43
Score = 34.4 bits (80), Expect = 0.015
Identities = 13/36 (36%), Positives = 15/36 (41%), Gaps = 1/36 (2%)
Query: 1352 TGNK-FECIYCKKKYRRKFDLKEHINKHTGNKPYHC 1386
TG K + C C K +R K L H HTG
Sbjct: 8 TGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43
Score = 33.6 bits (78), Expect = 0.026
Identities = 10/23 (43%), Positives = 14/23 (60%)
Query: 920 HINTHTGNKPYQCQICKKSFANK 942
++ TG KPY C C K+F +K
Sbjct: 3 SGSSGTGMKPYVCNECGKAFRSK 25
Score = 31.3 bits (72), Expect = 0.21
Identities = 10/33 (30%), Positives = 14/33 (42%)
Query: 652 HMIIHTGIKEHQCHVCNTAFYHIRSLSRHLKIH 684
TG+K + C+ C AF L H + H
Sbjct: 3 SGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTH 35
Score = 31.3 bits (72), Expect = 0.22
Identities = 12/35 (34%), Positives = 16/35 (45%), Gaps = 2/35 (5%)
Query: 989 GDKCHICKVCGA--KIKGNLQKHMLSHTGEKPFCC 1021
G K ++C CG + K L H +HTGE
Sbjct: 9 GMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43
Score = 29.4 bits (67), Expect = 1.0
Identities = 12/34 (35%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 588 HLRHVHSSIKRYMCDICGKQFTTLSYLDLHRKSH 621
+ +K Y+C+ CGK F + SYL +H ++H
Sbjct: 3 SGS-SGTGMKPYVCNECGKAFRSKSYLIIHTRTH 35
Score = 29.0 bits (66), Expect = 1.3
Identities = 12/35 (34%), Positives = 16/35 (45%), Gaps = 2/35 (5%)
Query: 1946 GDKCHVCKVCGA--KIKGNMKRHMLSHTGEKPFCC 1978
G K +VC CG + K + H +HTGE
Sbjct: 9 GMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43
Score = 27.4 bits (62), Expect = 4.2
Identities = 10/30 (33%), Positives = 13/30 (43%)
Query: 430 ECDYCKRKFTCKRYLAEHINAHTGNTIYGC 459
C+ C + F K YL H HTG +
Sbjct: 14 VCNECGKAFRSKSYLIIHTRTHTGESGPSS 43
>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 57.5 bits (140), Expect = 1e-10
Identities = 19/37 (51%), Positives = 23/37 (62%)
Query: 1040 HTGERPYKCDVCGSSFKDKWYLGVHMRKHNGEKPYNC 1076
TGE+PY+C +CG SF K L VH + H GEKP
Sbjct: 7 GTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGP 43
Score = 49.1 bits (118), Expect = 1e-07
Identities = 19/43 (44%), Positives = 23/43 (53%), Gaps = 3/43 (6%)
Query: 1008 KHMLSHTGEKPFCCHICGK--SLKGNLKDHILKCHTGERPYKC 1048
S TGEKP+ C ICGK + K L H + HTGE+P
Sbjct: 2 SSGSSGTGEKPYECSICGKSFTKKSQLHVH-QQIHTGEKPSGP 43
Score = 42.9 bits (102), Expect = 2e-05
Identities = 13/35 (37%), Positives = 17/35 (48%)
Query: 1062 GVHMRKHNGEKPYNCDYCGQTFAARSTFTFHLKKH 1096
G GEKPY C CG++F +S H + H
Sbjct: 1 GSSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIH 35
Score = 42.5 bits (101), Expect = 2e-05
Identities = 17/42 (40%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Query: 1965 RHMLSHTGEKPFCCDICGK--SLKGNLKAHILRCQGERPYKC 2004
S TGEKP+ C ICGK + K L H GE+P
Sbjct: 2 SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGP 43
Score = 38.7 bits (91), Expect = 5e-04
Identities = 15/38 (39%), Positives = 17/38 (44%)
Query: 895 IKTIERKFECDYCKMKFKSKSFLSEHINTHTGNKPYQC 932
T E+ +EC C F KS L H HTG KP
Sbjct: 6 SGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGP 43
Score = 36.7 bits (86), Expect = 0.002
Identities = 12/31 (38%), Positives = 14/31 (45%)
Query: 1511 FECDFCKKKFYRNFDLQEHINTHTGNKPYQC 1541
+EC C K F + L H HTG KP
Sbjct: 13 YECSICGKSFTKKSQLHVHQQIHTGEKPSGP 43
Score = 36.4 bits (85), Expect = 0.004
Identities = 15/30 (50%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Query: 1998 GERPYKCDVCGSSFKDKKHFSVHIRNH-GE 2026
GE+PY+C +CG SF K VH + H GE
Sbjct: 9 GEKPYECSICGKSFTKKSQLHVHQQIHTGE 38
Score = 36.0 bits (84), Expect = 0.004
Identities = 13/33 (39%), Positives = 19/33 (57%)
Query: 1529 HINTHTGNKPYQCQICNKSFGTRRNYRLHLKRH 1561
++ TG KPY+C IC KSF + +H + H
Sbjct: 3 SGSSGTGEKPYECSICGKSFTKKSQLHVHQQIH 35
Score = 34.8 bits (81), Expect = 0.013
Identities = 15/33 (45%), Positives = 15/33 (45%)
Query: 632 KKYECDSCNKKFWSKRALSEHMIIHTGIKEHQC 664
K YEC C K F K L H IHTG K
Sbjct: 11 KPYECSICGKSFTKKSQLHVHQQIHTGEKPSGP 43
Score = 34.1 bits (79), Expect = 0.023
Identities = 15/36 (41%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Query: 1352 TGNK-FECIYCKKKYRRKFDLKEHINKHTGNKPYHC 1386
TG K +EC C K + +K L H HTG KP
Sbjct: 8 TGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGP 43
Score = 33.7 bits (78), Expect = 0.032
Identities = 12/23 (52%), Positives = 15/23 (65%)
Query: 920 HINTHTGNKPYQCQICKKSFANK 942
++ TG KPY+C IC KSF K
Sbjct: 3 SGSSGTGEKPYECSICGKSFTKK 25
Score = 32.1 bits (74), Expect = 0.12
Identities = 10/33 (30%), Positives = 15/33 (45%)
Query: 652 HMIIHTGIKEHQCHVCNTAFYHIRSLSRHLKIH 684
TG K ++C +C +F L H +IH
Sbjct: 3 SGSSGTGEKPYECSICGKSFTKKSQLHVHQQIH 35
Score = 30.2 bits (69), Expect = 0.51
Identities = 13/34 (38%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 588 HLRHVHSSIKRYMCDICGKQFTTLSYLDLHRKSH 621
+ K Y C ICGK FT S L +H++ H
Sbjct: 3 SGS-SGTGEKPYECSICGKSFTKKSQLHVHQQIH 35
Score = 29.8 bits (68), Expect = 0.58
Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
Query: 989 GDKCHICKVCGAKI--KGNLQKHMLSHTGEKPFCC 1021
G+K + C +CG K L H HTGEKP
Sbjct: 9 GEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGP 43
Score = 28.3 bits (64), Expect = 2.4
Identities = 12/30 (40%), Positives = 13/30 (43%)
Query: 430 ECDYCKRKFTCKRYLAEHINAHTGNTIYGC 459
EC C + FT K L H HTG G
Sbjct: 14 ECSICGKSFTKKSQLHVHQQIHTGEKPSGP 43
Score = 27.5 bits (62), Expect = 5.0
Identities = 13/35 (37%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
Query: 1946 GDKCHVCKVCGAKI--KGNMKRHMLSHTGEKPFCC 1978
G+K + C +CG K + H HTGEKP
Sbjct: 9 GEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGP 43
Score = 27.1 bits (61), Expect = 7.2
Identities = 13/29 (44%), Positives = 15/29 (51%), Gaps = 4/29 (13%)
Query: 1378 HTGNKPYHCQICKESFYTLKTYRGDLKRH 1406
TG KPY C IC +SF T + L H
Sbjct: 7 GTGEKPYECSICGKSF----TKKSQLHVH 31
>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein,
phosphorylation, polymorphism, repeat, repressor,
transcription; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 57.5 bits (140), Expect = 1e-10
Identities = 14/37 (37%), Positives = 20/37 (54%)
Query: 1040 HTGERPYKCDVCGSSFKDKWYLGVHMRKHNGEKPYNC 1076
+ E+PYKC+ CG + + L +H R H GEK
Sbjct: 7 GSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGP 43
Score = 49.4 bits (119), Expect = 7e-08
Identities = 14/42 (33%), Positives = 20/42 (47%), Gaps = 3/42 (7%)
Query: 1009 HMLSHTGEKPFCCHICGK--SLKGNLKDHILKCHTGERPYKC 1048
S + EKP+ C CGK + + NL H + H GE+
Sbjct: 3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMH-QRVHMGEKTSGP 43
Score = 42.1 bits (100), Expect = 3e-05
Identities = 11/35 (31%), Positives = 16/35 (45%)
Query: 1062 GVHMRKHNGEKPYNCDYCGQTFAARSTFTFHLKKH 1096
G + EKPY C+ CG+ + R H + H
Sbjct: 1 GSSGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVH 35
Score = 41.3 bits (98), Expect = 5e-05
Identities = 14/45 (31%), Positives = 20/45 (44%), Gaps = 10/45 (22%)
Query: 1966 HMLSHTGEKPFCCDICGK--SLKGNLKAHILRCQ----GERPYKC 2004
S + EKP+ C+ CGK + + NL H Q GE+
Sbjct: 3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMH----QRVHMGEKTSGP 43
Score = 38.2 bits (90), Expect = 7e-04
Identities = 8/38 (21%), Positives = 16/38 (42%)
Query: 895 IKTIERKFECDYCKMKFKSKSFLSEHINTHTGNKPYQC 932
++E+ ++C+ C + + L H H G K
Sbjct: 6 SGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGP 43
Score = 38.2 bits (90), Expect = 7e-04
Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 4/35 (11%)
Query: 1529 HINTHTGNKPYQCQICNKSFGTRRNYRLHLKRHKR 1563
++ + KPY+C+ C K + N RL+L H+R
Sbjct: 3 SGSSGSVEKPYKCEDCGKGY----NRRLNLDMHQR 33
Score = 37.9 bits (89), Expect = 0.001
Identities = 9/31 (29%), Positives = 14/31 (45%)
Query: 1511 FECDFCKKKFYRNFDLQEHINTHTGNKPYQC 1541
++C+ C K + R +L H H G K
Sbjct: 13 YKCEDCGKGYNRRLNLDMHQRVHMGEKTSGP 43
Score = 37.1 bits (87), Expect = 0.002
Identities = 12/30 (40%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Query: 1998 GERPYKCDVCGSSFKDKKHFSVHIRNH-GE 2026
E+PYKC+ CG + + + +H R H GE
Sbjct: 9 VEKPYKCEDCGKGYNRRLNLDMHQRVHMGE 38
Score = 34.0 bits (79), Expect = 0.019
Identities = 11/36 (30%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
Query: 1352 TGNK-FECIYCKKKYRRKFDLKEHINKHTGNKPYHC 1386
+ K ++C C K Y R+ +L H H G K
Sbjct: 8 SVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGP 43
Score = 34.0 bits (79), Expect = 0.023
Identities = 10/33 (30%), Positives = 15/33 (45%)
Query: 632 KKYECDSCNKKFWSKRALSEHMIIHTGIKEHQC 664
K Y+C+ C K + + L H +H G K
Sbjct: 11 KPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGP 43
Score = 33.2 bits (77), Expect = 0.042
Identities = 11/35 (31%), Positives = 15/35 (42%), Gaps = 2/35 (5%)
Query: 989 GDKCHICKVCGA--KIKGNLQKHMLSHTGEKPFCC 1021
+K + C+ CG + NL H H GEK
Sbjct: 9 VEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGP 43
Score = 32.9 bits (76), Expect = 0.059
Identities = 6/23 (26%), Positives = 13/23 (56%)
Query: 920 HINTHTGNKPYQCQICKKSFANK 942
++ + KPY+C+ C K + +
Sbjct: 3 SGSSGSVEKPYKCEDCGKGYNRR 25
Score = 32.9 bits (76), Expect = 0.065
Identities = 8/45 (17%), Positives = 15/45 (33%), Gaps = 6/45 (13%)
Query: 652 HMIIHTGIKEHQCHVCNTAFYHIRSLSRHLKIH--EYNESKMYKC 694
+ K ++C C + +L H ++H E K
Sbjct: 3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGE----KTSGP 43
Score = 31.3 bits (72), Expect = 0.21
Identities = 11/34 (32%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 588 HLRHVHSSIKRYMCDICGKQFTTLSYLDLHRKSH 621
S K Y C+ CGK + LD+H++ H
Sbjct: 3 SGS-SGSVEKPYKCEDCGKGYNRRLNLDMHQRVH 35
Score = 29.4 bits (67), Expect = 0.83
Identities = 10/35 (28%), Positives = 15/35 (42%), Gaps = 2/35 (5%)
Query: 1946 GDKCHVCKVCGA--KIKGNMKRHMLSHTGEKPFCC 1978
+K + C+ CG + N+ H H GEK
Sbjct: 9 VEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGP 43
Score = 27.1 bits (61), Expect = 5.7
Identities = 8/33 (24%), Positives = 14/33 (42%), Gaps = 4/33 (12%)
Query: 1374 HINKHTGNKPYHCQICKESFYTLKTYRGDLKRH 1406
+ + KPY C+ C + + R +L H
Sbjct: 3 SGSSGSVEKPYKCEDCGKGY----NRRLNLDMH 31
>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 57.5 bits (140), Expect = 1e-10
Identities = 16/38 (42%), Positives = 20/38 (52%)
Query: 1040 HTGERPYKCDVCGSSFKDKWYLGVHMRKHNGEKPYNCD 1077
+GE+PYKC CG +K + L H R H GEK
Sbjct: 7 GSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPS 44
Score = 49.5 bits (119), Expect = 6e-08
Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 3/44 (6%)
Query: 1008 KHMLSHTGEKPFCCHICGK--SLKGNLKDHILKCHTGERPYKCD 1049
S +GEKP+ C CGK + +L H + HTGE+
Sbjct: 2 SSGSSGSGEKPYKCVECGKGYKRRLDLDFH-QRVHTGEKLSGPS 44
Score = 42.1 bits (100), Expect = 3e-05
Identities = 13/35 (37%), Positives = 17/35 (48%)
Query: 1062 GVHMRKHNGEKPYNCDYCGQTFAARSTFTFHLKKH 1096
G +GEKPY C CG+ + R FH + H
Sbjct: 1 GSSGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVH 35
Score = 41.4 bits (98), Expect = 5e-05
Identities = 13/42 (30%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Query: 1966 HMLSHTGEKPFCCDICGK--SLKGNLKAHILRCQGERPYKCD 2005
S +GEKP+ C CGK + +L H GE+
Sbjct: 3 SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPS 44
Score = 37.9 bits (89), Expect = 8e-04
Identities = 11/31 (35%), Positives = 14/31 (45%)
Query: 1511 FECDFCKKKFYRNFDLQEHINTHTGNKPYQC 1541
++C C K + R DL H HTG K
Sbjct: 13 YKCVECGKGYKRRLDLDFHQRVHTGEKLSGP 43
Score = 37.5 bits (88), Expect = 0.001
Identities = 10/38 (26%), Positives = 16/38 (42%)
Query: 895 IKTIERKFECDYCKMKFKSKSFLSEHINTHTGNKPYQC 932
+ E+ ++C C +K + L H HTG K
Sbjct: 6 SGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGP 43
Score = 37.1 bits (87), Expect = 0.002
Identities = 12/35 (34%), Positives = 18/35 (51%), Gaps = 4/35 (11%)
Query: 1529 HINTHTGNKPYQCQICNKSFGTRRNYRLHLKRHKR 1563
++ +G KPY+C C K + RL L H+R
Sbjct: 3 SGSSGSGEKPYKCVECGKGY----KRRLDLDFHQR 33
Score = 36.4 bits (85), Expect = 0.003
Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Query: 1998 GERPYKCDVCGSSFKDKKHFSVHIRNH-GE 2026
GE+PYKC CG +K + H R H GE
Sbjct: 9 GEKPYKCVECGKGYKRRLDLDFHQRVHTGE 38
Score = 36.0 bits (84), Expect = 0.004
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Query: 1352 TGNK-FECIYCKKKYRRKFDLKEHINKHTGNKPYHC 1386
+G K ++C+ C K Y+R+ DL H HTG K
Sbjct: 8 SGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGP 43
Score = 34.4 bits (80), Expect = 0.017
Identities = 11/33 (33%), Positives = 15/33 (45%)
Query: 632 KKYECDSCNKKFWSKRALSEHMIIHTGIKEHQC 664
K Y+C C K + + L H +HTG K
Sbjct: 11 KPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGP 43
Score = 32.1 bits (74), Expect = 0.11
Identities = 7/23 (30%), Positives = 13/23 (56%)
Query: 920 HINTHTGNKPYQCQICKKSFANK 942
++ +G KPY+C C K + +
Sbjct: 3 SGSSGSGEKPYKCVECGKGYKRR 25
Score = 30.6 bits (70), Expect = 0.34
Identities = 9/45 (20%), Positives = 16/45 (35%), Gaps = 6/45 (13%)
Query: 652 HMIIHTGIKEHQCHVCNTAFYHIRSLSRHLKIH--EYNESKMYKC 694
+G K ++C C + L H ++H E K+
Sbjct: 3 SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGE----KLSGP 43
Score = 30.6 bits (70), Expect = 0.34
Identities = 13/35 (37%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
Query: 989 GDKCHICKVCGA--KIKGNLQKHMLSHTGEKPFCC 1021
G+K + C CG K + +L H HTGEK
Sbjct: 9 GEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGP 43
Score = 29.0 bits (66), Expect = 1.2
Identities = 12/36 (33%), Positives = 17/36 (47%), Gaps = 2/36 (5%)
Query: 1946 GDKCHVCKVCGA--KIKGNMKRHMLSHTGEKPFCCD 1979
G+K + C CG K + ++ H HTGEK
Sbjct: 9 GEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPS 44
Score = 29.0 bits (66), Expect = 1.3
Identities = 11/30 (36%), Positives = 14/30 (46%)
Query: 592 VHSSIKRYMCDICGKQFTTLSYLDLHRKSH 621
S K Y C CGK + LD H++ H
Sbjct: 6 SGSGEKPYKCVECGKGYKRRLDLDFHQRVH 35
Score = 27.1 bits (61), Expect = 6.1
Identities = 10/29 (34%), Positives = 13/29 (44%), Gaps = 4/29 (13%)
Query: 1378 HTGNKPYHCQICKESFYTLKTYRGDLKRH 1406
+G KPY C C + + R DL H
Sbjct: 7 GSGEKPYKCVECGKGY----KRRLDLDFH 31
>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 57.5 bits (140), Expect = 1e-10
Identities = 16/37 (43%), Positives = 23/37 (62%)
Query: 1040 HTGERPYKCDVCGSSFKDKWYLGVHMRKHNGEKPYNC 1076
TGE+PYKC+ CG + K+ L +H + H GE+P
Sbjct: 7 GTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGP 43
Score = 50.2 bits (121), Expect = 4e-08
Identities = 21/43 (48%), Positives = 23/43 (53%), Gaps = 3/43 (6%)
Query: 1008 KHMLSHTGEKPFCCHICGK--SLKGNLKDHILKCHTGERPYKC 1048
S TGEKP+ C CGK + K NL H K HTGERP
Sbjct: 2 SSGSSGTGEKPYKCEKCGKGYNSKFNLDMH-QKVHTGERPSGP 43
Score = 42.1 bits (100), Expect = 3e-05
Identities = 18/41 (43%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Query: 1966 HMLSHTGEKPFCCDICGK--SLKGNLKAHILRCQGERPYKC 2004
S TGEKP+ C+ CGK + K NL H GERP
Sbjct: 3 SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGP 43
Score = 41.7 bits (99), Expect = 4e-05
Identities = 12/35 (34%), Positives = 17/35 (48%)
Query: 1062 GVHMRKHNGEKPYNCDYCGQTFAARSTFTFHLKKH 1096
G GEKPY C+ CG+ + ++ H K H
Sbjct: 1 GSSGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVH 35
Score = 39.0 bits (92), Expect = 4e-04
Identities = 12/38 (31%), Positives = 18/38 (47%)
Query: 895 IKTIERKFECDYCKMKFKSKSFLSEHINTHTGNKPYQC 932
T E+ ++C+ C + SK L H HTG +P
Sbjct: 6 SGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGP 43
Score = 37.1 bits (87), Expect = 0.002
Identities = 10/31 (32%), Positives = 16/31 (51%)
Query: 1511 FECDFCKKKFYRNFDLQEHINTHTGNKPYQC 1541
++C+ C K + F+L H HTG +P
Sbjct: 13 YKCEKCGKGYNSKFNLDMHQKVHTGERPSGP 43
Score = 37.1 bits (87), Expect = 0.002
Identities = 11/35 (31%), Positives = 20/35 (57%), Gaps = 4/35 (11%)
Query: 1529 HINTHTGNKPYQCQICNKSFGTRRNYRLHLKRHKR 1563
++ TG KPY+C+ C K + N + +L H++
Sbjct: 3 SGSSGTGEKPYKCEKCGKGY----NSKFNLDMHQK 33
Score = 36.7 bits (86), Expect = 0.002
Identities = 13/30 (43%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Query: 1998 GERPYKCDVCGSSFKDKKHFSVHIRNH-GE 2026
GE+PYKC+ CG + K + +H + H GE
Sbjct: 9 GEKPYKCEKCGKGYNSKFNLDMHQKVHTGE 38
Score = 34.8 bits (81), Expect = 0.012
Identities = 12/34 (35%), Positives = 17/34 (50%)
Query: 632 KKYECDSCNKKFWSKRALSEHMIIHTGIKEHQCH 665
K Y+C+ C K + SK L H +HTG +
Sbjct: 11 KPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPS 44
Score = 34.4 bits (80), Expect = 0.016
Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Query: 1352 TGNK-FECIYCKKKYRRKFDLKEHINKHTGNKPYHC 1386
TG K ++C C K Y KF+L H HTG +P
Sbjct: 8 TGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGP 43
Score = 32.5 bits (75), Expect = 0.072
Identities = 10/45 (22%), Positives = 16/45 (35%), Gaps = 6/45 (13%)
Query: 652 HMIIHTGIKEHQCHVCNTAFYHIRSLSRHLKIH--EYNESKMYKC 694
TG K ++C C + +L H K+H E +
Sbjct: 3 SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGE----RPSGP 43
Score = 32.1 bits (74), Expect = 0.10
Identities = 9/23 (39%), Positives = 15/23 (65%)
Query: 920 HINTHTGNKPYQCQICKKSFANK 942
++ TG KPY+C+ C K + +K
Sbjct: 3 SGSSGTGEKPYKCEKCGKGYNSK 25
Score = 30.2 bits (69), Expect = 0.53
Identities = 14/36 (38%), Positives = 18/36 (50%), Gaps = 2/36 (5%)
Query: 989 GDKCHICKVCGA--KIKGNLQKHMLSHTGEKPFCCH 1022
G+K + C+ CG K NL H HTGE+P
Sbjct: 9 GEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPS 44
Score = 28.6 bits (65), Expect = 1.9
Identities = 11/34 (32%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 588 HLRHVHSSIKRYMCDICGKQFTTLSYLDLHRKSH 621
+ K Y C+ CGK + + LD+H+K H
Sbjct: 3 SGS-SGTGEKPYKCEKCGKGYNSKFNLDMHQKVH 35
Score = 27.1 bits (61), Expect = 5.9
Identities = 13/35 (37%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
Query: 1946 GDKCHVCKVCGA--KIKGNMKRHMLSHTGEKPFCC 1978
G+K + C+ CG K N+ H HTGE+P
Sbjct: 9 GEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGP 43
>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 57.6 bits (140), Expect = 1e-10
Identities = 19/37 (51%), Positives = 21/37 (56%)
Query: 1040 HTGERPYKCDVCGSSFKDKWYLGVHMRKHNGEKPYNC 1076
TGE+PY+C CG SF K L VH R H GE P
Sbjct: 7 GTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGP 43
Score = 49.1 bits (118), Expect = 1e-07
Identities = 18/43 (41%), Positives = 20/43 (46%), Gaps = 3/43 (6%)
Query: 1008 KHMLSHTGEKPFCCHICGK--SLKGNLKDHILKCHTGERPYKC 1048
S TGEKP+ C CGK K L H + HTGE P
Sbjct: 2 SSGSSGTGEKPYECSDCGKSFIKKSQLHVH-QRIHTGENPSGP 43
Score = 42.5 bits (101), Expect = 2e-05
Identities = 13/35 (37%), Positives = 17/35 (48%)
Query: 1062 GVHMRKHNGEKPYNCDYCGQTFAARSTFTFHLKKH 1096
G GEKPY C CG++F +S H + H
Sbjct: 1 GSSGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIH 35
Score = 41.0 bits (97), Expect = 7e-05
Identities = 17/45 (37%), Positives = 18/45 (40%), Gaps = 10/45 (22%)
Query: 1966 HMLSHTGEKPFCCDICGK--SLKGNLKAHILRCQ----GERPYKC 2004
S TGEKP+ C CGK K L H Q GE P
Sbjct: 3 SGSSGTGEKPYECSDCGKSFIKKSQLHVH----QRIHTGENPSGP 43
Score = 38.7 bits (91), Expect = 5e-04
Identities = 14/38 (36%), Positives = 16/38 (42%)
Query: 895 IKTIERKFECDYCKMKFKSKSFLSEHINTHTGNKPYQC 932
T E+ +EC C F KS L H HTG P
Sbjct: 6 SGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGP 43
Score = 37.1 bits (87), Expect = 0.002
Identities = 11/31 (35%), Positives = 13/31 (41%)
Query: 1511 FECDFCKKKFYRNFDLQEHINTHTGNKPYQC 1541
+EC C K F + L H HTG P
Sbjct: 13 YECSDCGKSFIKKSQLHVHQRIHTGENPSGP 43
Score = 36.0 bits (84), Expect = 0.004
Identities = 16/30 (53%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Query: 1998 GERPYKCDVCGSSFKDKKHFSVHIRNH-GE 2026
GE+PY+C CG SF K VH R H GE
Sbjct: 9 GEKPYECSDCGKSFIKKSQLHVHQRIHTGE 38
Score = 35.2 bits (82), Expect = 0.007
Identities = 13/35 (37%), Positives = 18/35 (51%), Gaps = 4/35 (11%)
Query: 1529 HINTHTGNKPYQCQICNKSFGTRRNYRLHLKRHKR 1563
++ TG KPY+C C KSF + L H+R
Sbjct: 3 SGSSGTGEKPYECSDCGKSFIKKS----QLHVHQR 33
Score = 35.2 bits (82), Expect = 0.009
Identities = 14/33 (42%), Positives = 14/33 (42%)
Query: 632 KKYECDSCNKKFWSKRALSEHMIIHTGIKEHQC 664
K YEC C K F K L H IHTG
Sbjct: 11 KPYECSDCGKSFIKKSQLHVHQRIHTGENPSGP 43
Score = 34.1 bits (79), Expect = 0.019
Identities = 14/36 (38%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Query: 1352 TGNK-FECIYCKKKYRRKFDLKEHINKHTGNKPYHC 1386
TG K +EC C K + +K L H HTG P
Sbjct: 8 TGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGP 43
Score = 33.7 bits (78), Expect = 0.031
Identities = 11/23 (47%), Positives = 14/23 (60%)
Query: 920 HINTHTGNKPYQCQICKKSFANK 942
++ TG KPY+C C KSF K
Sbjct: 3 SGSSGTGEKPYECSDCGKSFIKK 25
Score = 31.4 bits (72), Expect = 0.19
Identities = 10/33 (30%), Positives = 14/33 (42%)
Query: 652 HMIIHTGIKEHQCHVCNTAFYHIRSLSRHLKIH 684
TG K ++C C +F L H +IH
Sbjct: 3 SGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIH 35
Score = 29.8 bits (68), Expect = 0.61
Identities = 13/35 (37%), Positives = 15/35 (42%), Gaps = 2/35 (5%)
Query: 989 GDKCHICKVCGA--KIKGNLQKHMLSHTGEKPFCC 1021
G+K + C CG K L H HTGE P
Sbjct: 9 GEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGP 43
Score = 29.0 bits (66), Expect = 1.4
Identities = 11/34 (32%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
Query: 588 HLRHVHSSIKRYMCDICGKQFTTLSYLDLHRKSH 621
+ K Y C CGK F S L +H++ H
Sbjct: 3 SGS-SGTGEKPYECSDCGKSFIKKSQLHVHQRIH 35
Score = 27.9 bits (63), Expect = 3.0
Identities = 11/30 (36%), Positives = 12/30 (40%)
Query: 430 ECDYCKRKFTCKRYLAEHINAHTGNTIYGC 459
EC C + F K L H HTG G
Sbjct: 14 ECSDCGKSFIKKSQLHVHQRIHTGENPSGP 43
Score = 27.1 bits (61), Expect = 5.6
Identities = 12/35 (34%), Positives = 15/35 (42%), Gaps = 2/35 (5%)
Query: 1946 GDKCHVCKVCGA--KIKGNMKRHMLSHTGEKPFCC 1978
G+K + C CG K + H HTGE P
Sbjct: 9 GEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGP 43
Score = 26.7 bits (60), Expect = 9.9
Identities = 9/16 (56%), Positives = 10/16 (62%)
Query: 1378 HTGNKPYHCQICKESF 1393
TG KPY C C +SF
Sbjct: 7 GTGEKPYECSDCGKSF 22
>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 42
Score = 57.1 bits (139), Expect = 1e-10
Identities = 14/36 (38%), Positives = 20/36 (55%)
Query: 1040 HTGERPYKCDVCGSSFKDKWYLGVHMRKHNGEKPYN 1075
GE+PYKC+ CG+ F +L H+ H G P +
Sbjct: 6 SGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPSS 41
Score = 49.4 bits (119), Expect = 7e-08
Identities = 14/40 (35%), Positives = 18/40 (45%), Gaps = 3/40 (7%)
Query: 1009 HMLSHTGEKPFCCHICGK--SLKGNLKDHILKCHTGERPY 1046
S GEKP+ C CG +L+ H+ HTG P
Sbjct: 2 SSGSSGGEKPYKCETCGARFVQVAHLRAHV-LIHTGSGPS 40
Score = 44.8 bits (107), Expect = 3e-06
Identities = 14/39 (35%), Positives = 19/39 (48%), Gaps = 2/39 (5%)
Query: 1966 HMLSHTGEKPFCCDICGK--SLKGNLKAHILRCQGERPY 2002
S GEKP+ C+ CG +L+AH+L G P
Sbjct: 2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPS 40
Score = 43.7 bits (104), Expect = 8e-06
Identities = 10/35 (28%), Positives = 14/35 (40%), Gaps = 4/35 (11%)
Query: 1529 HINTHTGNKPYQCQICNKSFGTRRNYRLHLKRHKR 1563
+ G KPY+C+ C F HL+ H
Sbjct: 2 SSGSSGGEKPYKCETCGARF----VQVAHLRAHVL 32
Score = 41.4 bits (98), Expect = 4e-05
Identities = 12/33 (36%), Positives = 15/33 (45%), Gaps = 4/33 (12%)
Query: 1064 HMRKHNGEKPYNCDYCGQTFAARSTFTFHLKKH 1096
GEKPY C+ CG F + HL+ H
Sbjct: 2 SSGSSGGEKPYKCETCGARFVQVA----HLRAH 30
Score = 39.0 bits (92), Expect = 3e-04
Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Query: 1998 GERPYKCDVCGSSFKDKKHFSVHIRNH-GE 2026
GE+PYKC+ CG+ F H H+ H G
Sbjct: 8 GEKPYKCETCGARFVQVAHLRAHVLIHTGS 37
Score = 36.3 bits (85), Expect = 0.003
Identities = 9/34 (26%), Positives = 13/34 (38%), Gaps = 4/34 (11%)
Query: 920 HINTHTGNKPYQCQICKKSFANKRSYQRDLKRHK 953
+ G KPY+C+ C F L+ H
Sbjct: 2 SSGSSGGEKPYKCETCGARF----VQVAHLRAHV 31
Score = 36.3 bits (85), Expect = 0.003
Identities = 9/29 (31%), Positives = 17/29 (58%)
Query: 1511 FECDFCKKKFYRNFDLQEHINTHTGNKPY 1539
++C+ C +F + L+ H+ HTG+ P
Sbjct: 12 YKCETCGARFVQVAHLRAHVLIHTGSGPS 40
Score = 35.2 bits (82), Expect = 0.008
Identities = 10/34 (29%), Positives = 18/34 (52%)
Query: 897 TIERKFECDYCKMKFKSKSFLSEHINTHTGNKPY 930
E+ ++C+ C +F + L H+ HTG+ P
Sbjct: 7 GGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPS 40
Score = 33.7 bits (78), Expect = 0.024
Identities = 11/29 (37%), Positives = 17/29 (58%)
Query: 632 KKYECDSCNKKFWSKRALSEHMIIHTGIK 660
K Y+C++C +F L H++IHTG
Sbjct: 10 KPYKCETCGARFVQVAHLRAHVLIHTGSG 38
Score = 33.7 bits (78), Expect = 0.026
Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
Query: 989 GDKCHICKVCGAKI--KGNLQKHMLSHTGEKPF 1019
G+K + C+ CGA+ +L+ H+L HTG P
Sbjct: 8 GEKPYKCETCGARFVQVAHLRAHVLIHTGSGPS 40
Score = 32.5 bits (75), Expect = 0.060
Identities = 9/33 (27%), Positives = 13/33 (39%)
Query: 652 HMIIHTGIKEHQCHVCNTAFYHIRSLSRHLKIH 684
G K ++C C F + L H+ IH
Sbjct: 2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIH 34
Score = 32.5 bits (75), Expect = 0.062
Identities = 12/33 (36%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
Query: 1946 GDKCHVCKVCGAKI--KGNMKRHMLSHTGEKPF 1976
G+K + C+ CGA+ +++ H+L HTG P
Sbjct: 8 GEKPYKCETCGARFVQVAHLRAHVLIHTGSGPS 40
Score = 32.5 bits (75), Expect = 0.065
Identities = 12/36 (33%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Query: 1350 SSTGNK-FECIYCKKKYRRKFDLKEHINKHTGNKPY 1384
SS G K ++C C ++ + L+ H+ HTG+ P
Sbjct: 5 SSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPS 40
Score = 31.7 bits (73), Expect = 0.15
Identities = 9/30 (30%), Positives = 14/30 (46%)
Query: 592 VHSSIKRYMCDICGKQFTTLSYLDLHRKSH 621
K Y C+ CG +F +++L H H
Sbjct: 5 SSGGEKPYKCETCGARFVQVAHLRAHVLIH 34
Score = 30.6 bits (70), Expect = 0.30
Identities = 9/33 (27%), Positives = 11/33 (33%), Gaps = 4/33 (12%)
Query: 1374 HINKHTGNKPYHCQICKESFYTLKTYRGDLKRH 1406
G KPY C+ C F L+ H
Sbjct: 2 SSGSSGGEKPYKCETCGARF----VQVAHLRAH 30
Score = 27.5 bits (62), Expect = 4.0
Identities = 8/28 (28%), Positives = 12/28 (42%), Gaps = 1/28 (3%)
Query: 391 VHNGKERKFICDICGKQFTSNIHASRHK 418
G E+ + C+ CG +F H H
Sbjct: 5 SSGG-EKPYKCETCGARFVQVAHLRAHV 31
>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 57.5 bits (140), Expect = 1e-10
Identities = 19/37 (51%), Positives = 22/37 (59%)
Query: 1040 HTGERPYKCDVCGSSFKDKWYLGVHMRKHNGEKPYNC 1076
TGERPY C VCG +F D+ L H + H GEKP
Sbjct: 7 GTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGP 43
Score = 49.0 bits (118), Expect = 1e-07
Identities = 18/42 (42%), Positives = 24/42 (57%), Gaps = 3/42 (7%)
Query: 1009 HMLSHTGEKPFCCHICGK--SLKGNLKDHILKCHTGERPYKC 1048
S TGE+P+ C +CGK + + NL H K HTGE+P
Sbjct: 3 SGSSGTGERPYICTVCGKAFTDRSNLIKH-QKIHTGEKPSGP 43
Score = 42.5 bits (101), Expect = 2e-05
Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 10/46 (21%)
Query: 1965 RHMLSHTGEKPFCCDICGK--SLKGNLKAHILRCQ----GERPYKC 2004
S TGE+P+ C +CGK + + NL H Q GE+P
Sbjct: 2 SSGSSGTGERPYICTVCGKAFTDRSNLIKH----QKIHTGEKPSGP 43
Score = 42.1 bits (100), Expect = 3e-05
Identities = 14/35 (40%), Positives = 16/35 (45%)
Query: 1062 GVHMRKHNGEKPYNCDYCGQTFAARSTFTFHLKKH 1096
G GE+PY C CG+ F RS H K H
Sbjct: 1 GSSGSSGTGERPYICTVCGKAFTDRSNLIKHQKIH 35
Score = 38.2 bits (90), Expect = 7e-04
Identities = 14/39 (35%), Positives = 17/39 (43%)
Query: 895 IKTIERKFECDYCKMKFKSKSFLSEHINTHTGNKPYQCQ 933
T ER + C C F +S L +H HTG KP
Sbjct: 6 SGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPS 44
Score = 37.1 bits (87), Expect = 0.002
Identities = 11/32 (34%), Positives = 14/32 (43%)
Query: 1511 FECDFCKKKFYRNFDLQEHINTHTGNKPYQCQ 1542
+ C C K F +L +H HTG KP
Sbjct: 13 YICTVCGKAFTDRSNLIKHQKIHTGEKPSGPS 44
Score = 36.7 bits (86), Expect = 0.002
Identities = 11/35 (31%), Positives = 20/35 (57%), Gaps = 4/35 (11%)
Query: 1529 HINTHTGNKPYQCQICNKSFGTRRNYRLHLKRHKR 1563
++ TG +PY C +C K+F R +L +H++
Sbjct: 3 SGSSGTGERPYICTVCGKAF----TDRSNLIKHQK 33
Score = 36.7 bits (86), Expect = 0.002
Identities = 15/30 (50%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Query: 1998 GERPYKCDVCGSSFKDKKHFSVHIRNH-GE 2026
GERPY C VCG +F D+ + H + H GE
Sbjct: 9 GERPYICTVCGKAFTDRSNLIKHQKIHTGE 38
Score = 34.4 bits (80), Expect = 0.018
Identities = 12/37 (32%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 1352 TGNK-FECIYCKKKYRRKFDLKEHINKHTGNKPYHCQ 1387
TG + + C C K + + +L +H HTG KP
Sbjct: 8 TGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPS 44
Score = 33.2 bits (77), Expect = 0.037
Identities = 8/23 (34%), Positives = 15/23 (65%)
Query: 920 HINTHTGNKPYQCQICKKSFANK 942
++ TG +PY C +C K+F ++
Sbjct: 3 SGSSGTGERPYICTVCGKAFTDR 25
Score = 33.2 bits (77), Expect = 0.038
Identities = 12/33 (36%), Positives = 15/33 (45%)
Query: 632 KKYECDSCNKKFWSKRALSEHMIIHTGIKEHQC 664
+ Y C C K F + L +H IHTG K
Sbjct: 11 RPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGP 43
Score = 32.8 bits (76), Expect = 0.062
Identities = 14/45 (31%), Positives = 18/45 (40%), Gaps = 6/45 (13%)
Query: 652 HMIIHTGIKEHQCHVCNTAFYHIRSLSRHLKIH--EYNESKMYKC 694
TG + + C VC AF +L +H KIH E K
Sbjct: 3 SGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGE----KPSGP 43
Score = 32.8 bits (76), Expect = 0.064
Identities = 16/35 (45%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
Query: 989 GDKCHICKVCGA--KIKGNLQKHMLSHTGEKPFCC 1021
G++ +IC VCG + NL KH HTGEKP
Sbjct: 9 GERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGP 43
Score = 30.2 bits (69), Expect = 0.54
Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
Query: 1946 GDKCHVCKVCGA--KIKGNMKRHMLSHTGEKPFCC 1978
G++ ++C VCG + N+ +H HTGEKP
Sbjct: 9 GERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGP 43
Score = 29.0 bits (66), Expect = 1.2
Identities = 11/29 (37%), Positives = 17/29 (58%), Gaps = 4/29 (13%)
Query: 1378 HTGNKPYHCQICKESFYTLKTYRGDLKRH 1406
TG +PY C +C ++F T R +L +H
Sbjct: 7 GTGERPYICTVCGKAF----TDRSNLIKH 31
Score = 28.6 bits (65), Expect = 2.0
Identities = 12/30 (40%), Positives = 17/30 (56%)
Query: 592 VHSSIKRYMCDICGKQFTTLSYLDLHRKSH 621
+ + Y+C +CGK FT S L H+K H
Sbjct: 6 SGTGERPYICTVCGKAFTDRSNLIKHQKIH 35
Score = 27.1 bits (61), Expect = 7.0
Identities = 10/30 (33%), Positives = 13/30 (43%)
Query: 430 ECDYCKRKFTCKRYLAEHINAHTGNTIYGC 459
C C + FT + L +H HTG G
Sbjct: 14 ICTVCGKAFTDRSNLIKHQKIHTGEKPSGP 43
>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 57.2 bits (139), Expect = 1e-10
Identities = 17/37 (45%), Positives = 21/37 (56%)
Query: 1040 HTGERPYKCDVCGSSFKDKWYLGVHMRKHNGEKPYNC 1076
+GE+PY C+ CG +F K L H R H GEKP
Sbjct: 7 GSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGP 43
Score = 49.1 bits (118), Expect = 1e-07
Identities = 18/42 (42%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Query: 1009 HMLSHTGEKPFCCHICGK--SLKGNLKDHILKCHTGERPYKC 1048
S +GEKP+ C+ CGK S K L H + HTGE+P
Sbjct: 3 SGSSGSGEKPYGCNECGKTFSQKSILSAH-QRTHTGEKPSGP 43
Score = 45.6 bits (109), Expect = 2e-06
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 1062 GVHMRKHNGEKPYNCDYCGQTFAARSTFTFHLKKH 1096
G +GEKPY C+ CG+TF+ +S + H + H
Sbjct: 1 GSSGSSGSGEKPYGCNECGKTFSQKSILSAHQRTH 35
Score = 41.0 bits (97), Expect = 7e-05
Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Query: 1966 HMLSHTGEKPFCCDICGK--SLKGNLKAHILRCQGERPYKC 2004
S +GEKP+ C+ CGK S K L AH GE+P
Sbjct: 3 SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGP 43
Score = 39.4 bits (93), Expect = 3e-04
Identities = 15/38 (39%), Positives = 19/38 (50%)
Query: 895 IKTIERKFECDYCKMKFKSKSFLSEHINTHTGNKPYQC 932
+ E+ + C+ C F KS LS H THTG KP
Sbjct: 6 SGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGP 43
Score = 38.7 bits (91), Expect = 5e-04
Identities = 12/31 (38%), Positives = 15/31 (48%)
Query: 1511 FECDFCKKKFYRNFDLQEHINTHTGNKPYQC 1541
+ C+ C K F + L H THTG KP
Sbjct: 13 YGCNECGKTFSQKSILSAHQRTHTGEKPSGP 43
Score = 37.1 bits (87), Expect = 0.002
Identities = 11/35 (31%), Positives = 18/35 (51%), Gaps = 4/35 (11%)
Query: 1529 HINTHTGNKPYQCQICNKSFGTRRNYRLHLKRHKR 1563
++ +G KPY C C K+F + + L H+R
Sbjct: 3 SGSSGSGEKPYGCNECGKTF----SQKSILSAHQR 33
Score = 36.0 bits (84), Expect = 0.004
Identities = 15/30 (50%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Query: 1998 GERPYKCDVCGSSFKDKKHFSVHIRNH-GE 2026
GE+PY C+ CG +F K S H R H GE
Sbjct: 9 GEKPYGCNECGKTFSQKSILSAHQRTHTGE 38
Score = 34.4 bits (80), Expect = 0.017
Identities = 14/33 (42%), Positives = 15/33 (45%)
Query: 632 KKYECDSCNKKFWSKRALSEHMIIHTGIKEHQC 664
K Y C+ C K F K LS H HTG K
Sbjct: 11 KPYGCNECGKTFSQKSILSAHQRTHTGEKPSGP 43
Score = 33.7 bits (78), Expect = 0.027
Identities = 13/36 (36%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Query: 1352 TGNK-FECIYCKKKYRRKFDLKEHINKHTGNKPYHC 1386
+G K + C C K + +K L H HTG KP
Sbjct: 8 SGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGP 43
Score = 33.3 bits (77), Expect = 0.034
Identities = 9/23 (39%), Positives = 14/23 (60%)
Query: 920 HINTHTGNKPYQCQICKKSFANK 942
++ +G KPY C C K+F+ K
Sbjct: 3 SGSSGSGEKPYGCNECGKTFSQK 25
Score = 32.1 bits (74), Expect = 0.11
Identities = 11/45 (24%), Positives = 15/45 (33%), Gaps = 6/45 (13%)
Query: 652 HMIIHTGIKEHQCHVCNTAFYHIRSLSRHLKIH--EYNESKMYKC 694
+G K + C+ C F LS H + H E K
Sbjct: 3 SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGE----KPSGP 43
Score = 31.0 bits (71), Expect = 0.28
Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
Query: 989 GDKCHICKVCGAKI--KGNLQKHMLSHTGEKPFCC 1021
G+K + C CG K L H +HTGEKP
Sbjct: 9 GEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGP 43
Score = 29.0 bits (66), Expect = 1.4
Identities = 12/34 (35%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 588 HLRHVHSSIKRYMCDICGKQFTTLSYLDLHRKSH 621
S K Y C+ CGK F+ S L H+++H
Sbjct: 3 SGS-SGSGEKPYGCNECGKTFSQKSILSAHQRTH 35
Score = 27.9 bits (63), Expect = 3.1
Identities = 13/35 (37%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
Query: 1946 GDKCHVCKVCGAKI--KGNMKRHMLSHTGEKPFCC 1978
G+K + C CG K + H +HTGEKP
Sbjct: 9 GEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGP 43
Score = 26.7 bits (60), Expect = 7.7
Identities = 10/30 (33%), Positives = 14/30 (46%)
Query: 430 ECDYCKRKFTCKRYLAEHINAHTGNTIYGC 459
C+ C + F+ K L+ H HTG G
Sbjct: 14 GCNECGKTFSQKSILSAHQRTHTGEKPSGP 43
>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding,
metal-binding, nuclear protein, repeat, transcription,
transcription regulation; NMR {Homo sapiens}
Length = 46
Score = 57.2 bits (139), Expect = 1e-10
Identities = 17/37 (45%), Positives = 17/37 (45%)
Query: 1040 HTGERPYKCDVCGSSFKDKWYLGVHMRKHNGEKPYNC 1076
G PYKC C SF K L VH R H EKP
Sbjct: 7 GAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGP 43
Score = 49.8 bits (120), Expect = 5e-08
Identities = 14/42 (33%), Positives = 17/42 (40%), Gaps = 3/42 (7%)
Query: 1009 HMLSHTGEKPFCCHICGK--SLKGNLKDHILKCHTGERPYKC 1048
S G P+ C C K S K L H + HT E+P
Sbjct: 3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVH-QRMHTREKPSGP 43
Score = 42.5 bits (101), Expect = 2e-05
Identities = 12/41 (29%), Positives = 14/41 (34%), Gaps = 2/41 (4%)
Query: 1966 HMLSHTGEKPFCCDICGK--SLKGNLKAHILRCQGERPYKC 2004
S G P+ C C K S K L H E+P
Sbjct: 3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGP 43
Score = 40.6 bits (96), Expect = 1e-04
Identities = 9/35 (25%), Positives = 14/35 (40%)
Query: 1062 GVHMRKHNGEKPYNCDYCGQTFAARSTFTFHLKKH 1096
G G PY C C ++F+ + H + H
Sbjct: 1 GSSGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMH 35
Score = 38.3 bits (90), Expect = 6e-04
Identities = 12/35 (34%), Positives = 18/35 (51%), Gaps = 4/35 (11%)
Query: 1529 HINTHTGNKPYQCQICNKSFGTRRNYRLHLKRHKR 1563
++ G PY+C C KSF + +L L H+R
Sbjct: 3 SGSSGAGVNPYKCSQCEKSF----SGKLRLLVHQR 33
Score = 37.9 bits (89), Expect = 0.001
Identities = 14/30 (46%), Positives = 14/30 (46%), Gaps = 1/30 (3%)
Query: 1998 GERPYKCDVCGSSFKDKKHFSVHIRNH-GE 2026
G PYKC C SF K VH R H E
Sbjct: 9 GVNPYKCSQCEKSFSGKLRLLVHQRMHTRE 38
Score = 37.1 bits (87), Expect = 0.001
Identities = 10/36 (27%), Positives = 13/36 (36%)
Query: 897 TIERKFECDYCKMKFKSKSFLSEHINTHTGNKPYQC 932
++C C+ F K L H HT KP
Sbjct: 8 AGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGP 43
Score = 36.7 bits (86), Expect = 0.002
Identities = 10/31 (32%), Positives = 13/31 (41%)
Query: 1511 FECDFCKKKFYRNFDLQEHINTHTGNKPYQC 1541
++C C+K F L H HT KP
Sbjct: 13 YKCSQCEKSFSGKLRLLVHQRMHTREKPSGP 43
Score = 35.2 bits (82), Expect = 0.008
Identities = 9/23 (39%), Positives = 14/23 (60%)
Query: 920 HINTHTGNKPYQCQICKKSFANK 942
++ G PY+C C+KSF+ K
Sbjct: 3 SGSSGAGVNPYKCSQCEKSFSGK 25
Score = 34.4 bits (80), Expect = 0.014
Identities = 11/36 (30%), Positives = 15/36 (41%), Gaps = 1/36 (2%)
Query: 1352 TGNK-FECIYCKKKYRRKFDLKEHINKHTGNKPYHC 1386
G ++C C+K + K L H HT KP
Sbjct: 8 AGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGP 43
Score = 34.1 bits (79), Expect = 0.020
Identities = 11/33 (33%), Positives = 13/33 (39%)
Query: 632 KKYECDSCNKKFWSKRALSEHMIIHTGIKEHQC 664
Y+C C K F K L H +HT K
Sbjct: 11 NPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGP 43
Score = 30.6 bits (70), Expect = 0.38
Identities = 11/35 (31%), Positives = 12/35 (34%), Gaps = 2/35 (5%)
Query: 989 GDKCHICKVCGA--KIKGNLQKHMLSHTGEKPFCC 1021
G + C C K L H HT EKP
Sbjct: 9 GVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGP 43
Score = 29.4 bits (67), Expect = 0.86
Identities = 8/29 (27%), Positives = 14/29 (48%)
Query: 593 HSSIKRYMCDICGKQFTTLSYLDLHRKSH 621
+ + Y C C K F+ L +H++ H
Sbjct: 7 GAGVNPYKCSQCEKSFSGKLRLLVHQRMH 35
Score = 29.0 bits (66), Expect = 1.3
Identities = 7/33 (21%), Positives = 13/33 (39%)
Query: 652 HMIIHTGIKEHQCHVCNTAFYHIRSLSRHLKIH 684
G+ ++C C +F L H ++H
Sbjct: 3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMH 35
Score = 28.3 bits (64), Expect = 2.1
Identities = 9/34 (26%), Positives = 15/34 (44%), Gaps = 4/34 (11%)
Query: 1374 HINKHTGNKPYHCQICKESFYTLKTYRGDLKRHE 1407
+ G PY C C++SF + + L H+
Sbjct: 3 SGSSGAGVNPYKCSQCEKSF----SGKLRLLVHQ 32
Score = 27.9 bits (63), Expect = 3.7
Identities = 10/35 (28%), Positives = 12/35 (34%), Gaps = 2/35 (5%)
Query: 1946 GDKCHVCKVCGA--KIKGNMKRHMLSHTGEKPFCC 1978
G + C C K + H HT EKP
Sbjct: 9 GVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGP 43
Score = 27.1 bits (61), Expect = 5.8
Identities = 9/30 (30%), Positives = 13/30 (43%)
Query: 430 ECDYCKRKFTCKRYLAEHINAHTGNTIYGC 459
+C C++ F+ K L H HT G
Sbjct: 14 KCSQCEKSFSGKLRLLVHQRMHTREKPSGP 43
>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 57.1 bits (139), Expect = 1e-10
Identities = 16/37 (43%), Positives = 21/37 (56%)
Query: 1040 HTGERPYKCDVCGSSFKDKWYLGVHMRKHNGEKPYNC 1076
TGE+PYKC CG +F K L +H + H GE+
Sbjct: 7 GTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGP 43
Score = 51.0 bits (123), Expect = 2e-08
Identities = 18/43 (41%), Positives = 21/43 (48%), Gaps = 3/43 (6%)
Query: 1008 KHMLSHTGEKPFCCHICGK--SLKGNLKDHILKCHTGERPYKC 1048
S TGEKP+ C CGK + K L H + HTGER
Sbjct: 2 SSGSSGTGEKPYKCSDCGKAFTRKSGLHIH-QQSHTGERHSGP 43
Score = 43.3 bits (103), Expect = 1e-05
Identities = 17/46 (36%), Positives = 19/46 (41%), Gaps = 10/46 (21%)
Query: 1965 RHMLSHTGEKPFCCDICGK--SLKGNLKAHILRCQ----GERPYKC 2004
S TGEKP+ C CGK + K L H Q GER
Sbjct: 2 SSGSSGTGEKPYKCSDCGKAFTRKSGLHIH----QQSHTGERHSGP 43
Score = 41.3 bits (98), Expect = 5e-05
Identities = 13/35 (37%), Positives = 16/35 (45%)
Query: 1062 GVHMRKHNGEKPYNCDYCGQTFAARSTFTFHLKKH 1096
G GEKPY C CG+ F +S H + H
Sbjct: 1 GSSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSH 35
Score = 38.3 bits (90), Expect = 7e-04
Identities = 11/33 (33%), Positives = 18/33 (54%)
Query: 1529 HINTHTGNKPYQCQICNKSFGTRRNYRLHLKRH 1561
++ TG KPY+C C K+F + +H + H
Sbjct: 3 SGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSH 35
Score = 37.1 bits (87), Expect = 0.002
Identities = 12/38 (31%), Positives = 17/38 (44%)
Query: 895 IKTIERKFECDYCKMKFKSKSFLSEHINTHTGNKPYQC 932
T E+ ++C C F KS L H +HTG +
Sbjct: 6 SGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGP 43
Score = 37.1 bits (87), Expect = 0.002
Identities = 10/31 (32%), Positives = 14/31 (45%)
Query: 1511 FECDFCKKKFYRNFDLQEHINTHTGNKPYQC 1541
++C C K F R L H +HTG +
Sbjct: 13 YKCSDCGKAFTRKSGLHIHQQSHTGERHSGP 43
Score = 36.3 bits (85), Expect = 0.004
Identities = 14/30 (46%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Query: 1998 GERPYKCDVCGSSFKDKKHFSVHIRNH-GE 2026
GE+PYKC CG +F K +H ++H GE
Sbjct: 9 GEKPYKCSDCGKAFTRKSGLHIHQQSHTGE 38
Score = 34.8 bits (81), Expect = 0.012
Identities = 13/36 (36%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Query: 1352 TGNK-FECIYCKKKYRRKFDLKEHINKHTGNKPYHC 1386
TG K ++C C K + RK L H HTG +
Sbjct: 8 TGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGP 43
Score = 34.8 bits (81), Expect = 0.013
Identities = 12/33 (36%), Positives = 14/33 (42%)
Query: 632 KKYECDSCNKKFWSKRALSEHMIIHTGIKEHQC 664
K Y+C C K F K L H HTG +
Sbjct: 11 KPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGP 43
Score = 34.4 bits (80), Expect = 0.014
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 920 HINTHTGNKPYQCQICKKSFANKRS 944
++ TG KPY+C C K+F K
Sbjct: 3 SGSSGTGEKPYKCSDCGKAFTRKSG 27
Score = 31.3 bits (72), Expect = 0.21
Identities = 11/45 (24%), Positives = 15/45 (33%), Gaps = 6/45 (13%)
Query: 652 HMIIHTGIKEHQCHVCNTAFYHIRSLSRHLKIH--EYNESKMYKC 694
TG K ++C C AF L H + H E +
Sbjct: 3 SGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGE----RHSGP 43
Score = 30.6 bits (70), Expect = 0.40
Identities = 13/34 (38%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 588 HLRHVHSSIKRYMCDICGKQFTTLSYLDLHRKSH 621
+ K Y C CGK FT S L +H++SH
Sbjct: 3 SGS-SGTGEKPYKCSDCGKAFTRKSGLHIHQQSH 35
Score = 29.8 bits (68), Expect = 0.77
Identities = 13/35 (37%), Positives = 16/35 (45%), Gaps = 2/35 (5%)
Query: 989 GDKCHICKVCGAKI--KGNLQKHMLSHTGEKPFCC 1021
G+K + C CG K L H SHTGE+
Sbjct: 9 GEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGP 43
Score = 27.5 bits (62), Expect = 5.1
Identities = 12/35 (34%), Positives = 16/35 (45%), Gaps = 2/35 (5%)
Query: 1946 GDKCHVCKVCGAKI--KGNMKRHMLSHTGEKPFCC 1978
G+K + C CG K + H SHTGE+
Sbjct: 9 GEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGP 43
Score = 27.1 bits (61), Expect = 7.0
Identities = 11/29 (37%), Positives = 14/29 (48%), Gaps = 4/29 (13%)
Query: 1378 HTGNKPYHCQICKESFYTLKTYRGDLKRH 1406
TG KPY C C ++F T + L H
Sbjct: 7 GTGEKPYKCSDCGKAF----TRKSGLHIH 31
Score = 26.7 bits (60), Expect = 8.4
Identities = 11/30 (36%), Positives = 14/30 (46%)
Query: 430 ECDYCKRKFTCKRYLAEHINAHTGNTIYGC 459
+C C + FT K L H +HTG G
Sbjct: 14 KCSDCGKAFTRKSGLHIHQQSHTGERHSGP 43
>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 57.2 bits (139), Expect = 1e-10
Identities = 17/39 (43%), Positives = 21/39 (53%)
Query: 1038 KCHTGERPYKCDVCGSSFKDKWYLGVHMRKHNGEKPYNC 1076
TGE+PYKC CG SF K L +H + H GE+
Sbjct: 5 SSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGP 43
Score = 50.6 bits (122), Expect = 3e-08
Identities = 21/42 (50%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Query: 1009 HMLSHTGEKPFCCHICGKSL--KGNLKDHILKCHTGERPYKC 1048
S TGEKP+ C CGKS K L+ H KCHTGER
Sbjct: 3 SGSSGTGEKPYKCSDCGKSFTWKSRLRIH-QKCHTGERHSGP 43
Score = 42.5 bits (101), Expect = 2e-05
Identities = 17/41 (41%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 1966 HMLSHTGEKPFCCDICGKSL--KGNLKAHILRCQGERPYKC 2004
S TGEKP+ C CGKS K L+ H GER
Sbjct: 3 SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGP 43
Score = 41.8 bits (99), Expect = 3e-05
Identities = 14/35 (40%), Positives = 17/35 (48%)
Query: 1062 GVHMRKHNGEKPYNCDYCGQTFAARSTFTFHLKKH 1096
G GEKPY C CG++F +S H K H
Sbjct: 1 GSSGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCH 35
Score = 37.5 bits (88), Expect = 0.001
Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 4/35 (11%)
Query: 1529 HINTHTGNKPYQCQICNKSFGTRRNYRLHLKRHKR 1563
++ TG KPY+C C KSF ++ L+ H++
Sbjct: 3 SGSSGTGEKPYKCSDCGKSF----TWKSRLRIHQK 33
Score = 37.1 bits (87), Expect = 0.002
Identities = 12/38 (31%), Positives = 16/38 (42%)
Query: 895 IKTIERKFECDYCKMKFKSKSFLSEHINTHTGNKPYQC 932
T E+ ++C C F KS L H HTG +
Sbjct: 6 SGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGP 43
Score = 36.0 bits (84), Expect = 0.004
Identities = 15/30 (50%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Query: 1998 GERPYKCDVCGSSFKDKKHFSVHIRNH-GE 2026
GE+PYKC CG SF K +H + H GE
Sbjct: 9 GEKPYKCSDCGKSFTWKSRLRIHQKCHTGE 38
Score = 36.0 bits (84), Expect = 0.004
Identities = 9/31 (29%), Positives = 13/31 (41%)
Query: 1511 FECDFCKKKFYRNFDLQEHINTHTGNKPYQC 1541
++C C K F L+ H HTG +
Sbjct: 13 YKCSDCGKSFTWKSRLRIHQKCHTGERHSGP 43
Score = 34.4 bits (80), Expect = 0.017
Identities = 12/33 (36%), Positives = 14/33 (42%)
Query: 632 KKYECDSCNKKFWSKRALSEHMIIHTGIKEHQC 664
K Y+C C K F K L H HTG +
Sbjct: 11 KPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGP 43
Score = 33.7 bits (78), Expect = 0.029
Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 3/31 (9%)
Query: 920 HINTHTGNKPYQCQICKKSFANK---RSYQR 947
++ TG KPY+C C KSF K R +Q+
Sbjct: 3 SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQK 33
Score = 33.7 bits (78), Expect = 0.031
Identities = 12/36 (33%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Query: 1352 TGNK-FECIYCKKKYRRKFDLKEHINKHTGNKPYHC 1386
TG K ++C C K + K L+ H HTG +
Sbjct: 8 TGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGP 43
Score = 32.5 bits (75), Expect = 0.077
Identities = 11/45 (24%), Positives = 15/45 (33%), Gaps = 6/45 (13%)
Query: 652 HMIIHTGIKEHQCHVCNTAFYHIRSLSRHLKIH--EYNESKMYKC 694
TG K ++C C +F L H K H E +
Sbjct: 3 SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGE----RHSGP 43
Score = 29.8 bits (68), Expect = 0.71
Identities = 12/35 (34%), Positives = 16/35 (45%), Gaps = 2/35 (5%)
Query: 989 GDKCHICKVCGA--KIKGNLQKHMLSHTGEKPFCC 1021
G+K + C CG K L+ H HTGE+
Sbjct: 9 GEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGP 43
Score = 29.8 bits (68), Expect = 0.76
Identities = 13/30 (43%), Positives = 16/30 (53%)
Query: 592 VHSSIKRYMCDICGKQFTTLSYLDLHRKSH 621
+ K Y C CGK FT S L +H+K H
Sbjct: 6 SGTGEKPYKCSDCGKSFTWKSRLRIHQKCH 35
Score = 28.7 bits (65), Expect = 1.6
Identities = 12/29 (41%), Positives = 16/29 (55%), Gaps = 4/29 (13%)
Query: 1378 HTGNKPYHCQICKESFYTLKTYRGDLKRH 1406
TG KPY C C +SF T++ L+ H
Sbjct: 7 GTGEKPYKCSDCGKSF----TWKSRLRIH 31
Score = 27.9 bits (63), Expect = 3.8
Identities = 11/35 (31%), Positives = 16/35 (45%), Gaps = 2/35 (5%)
Query: 1946 GDKCHVCKVCGA--KIKGNMKRHMLSHTGEKPFCC 1978
G+K + C CG K ++ H HTGE+
Sbjct: 9 GEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGP 43
Score = 27.1 bits (61), Expect = 5.8
Identities = 11/30 (36%), Positives = 13/30 (43%)
Query: 430 ECDYCKRKFTCKRYLAEHINAHTGNTIYGC 459
+C C + FT K L H HTG G
Sbjct: 14 KCSDCGKSFTWKSRLRIHQKCHTGERHSGP 43
>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein,
phosphorylation, polymorphism, repeat, repressor,
transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB:
2ena_A 2en4_A
Length = 46
Score = 57.1 bits (139), Expect = 1e-10
Identities = 17/37 (45%), Positives = 21/37 (56%)
Query: 1040 HTGERPYKCDVCGSSFKDKWYLGVHMRKHNGEKPYNC 1076
TGE+P+KC CG F + L VH + H GEKP
Sbjct: 7 GTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGP 43
Score = 49.8 bits (120), Expect = 6e-08
Identities = 20/43 (46%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
Query: 1008 KHMLSHTGEKPFCCHICGK--SLKGNLKDHILKCHTGERPYKC 1048
S TGEKPF C CGK S + L H K HTGE+P
Sbjct: 2 SSGSSGTGEKPFKCVECGKGFSRRSALNVH-HKLHTGEKPSGP 43
Score = 41.7 bits (99), Expect = 4e-05
Identities = 14/35 (40%), Positives = 17/35 (48%)
Query: 1062 GVHMRKHNGEKPYNCDYCGQTFAARSTFTFHLKKH 1096
G GEKP+ C CG+ F+ RS H K H
Sbjct: 1 GSSGSSGTGEKPFKCVECGKGFSRRSALNVHHKLH 35
Score = 41.4 bits (98), Expect = 5e-05
Identities = 17/42 (40%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Query: 1965 RHMLSHTGEKPFCCDICGK--SLKGNLKAHILRCQGERPYKC 2004
S TGEKPF C CGK S + L H GE+P
Sbjct: 2 SSGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGP 43
Score = 37.9 bits (89), Expect = 0.001
Identities = 14/38 (36%), Positives = 18/38 (47%)
Query: 895 IKTIERKFECDYCKMKFKSKSFLSEHINTHTGNKPYQC 932
T E+ F+C C F +S L+ H HTG KP
Sbjct: 6 SGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGP 43
Score = 37.5 bits (88), Expect = 0.001
Identities = 13/31 (41%), Positives = 14/31 (45%)
Query: 1511 FECDFCKKKFYRNFDLQEHINTHTGNKPYQC 1541
F+C C K F R L H HTG KP
Sbjct: 13 FKCVECGKGFSRRSALNVHHKLHTGEKPSGP 43
Score = 36.3 bits (85), Expect = 0.004
Identities = 11/35 (31%), Positives = 17/35 (48%), Gaps = 4/35 (11%)
Query: 1529 HINTHTGNKPYQCQICNKSFGTRRNYRLHLKRHKR 1563
++ TG KP++C C K F + R L H +
Sbjct: 3 SGSSGTGEKPFKCVECGKGF----SRRSALNVHHK 33
Score = 36.0 bits (84), Expect = 0.005
Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Query: 1998 GERPYKCDVCGSSFKDKKHFSVHIRNH-GE 2026
GE+P+KC CG F + +VH + H GE
Sbjct: 9 GEKPFKCVECGKGFSRRSALNVHHKLHTGE 38
Score = 34.4 bits (80), Expect = 0.015
Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Query: 1352 TGNK-FECIYCKKKYRRKFDLKEHINKHTGNKPYHC 1386
TG K F+C+ C K + R+ L H HTG KP
Sbjct: 8 TGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGP 43
Score = 33.6 bits (78), Expect = 0.032
Identities = 12/33 (36%), Positives = 17/33 (51%)
Query: 632 KKYECDSCNKKFWSKRALSEHMIIHTGIKEHQC 664
K ++C C K F + AL+ H +HTG K
Sbjct: 11 KPFKCVECGKGFSRRSALNVHHKLHTGEKPSGP 43
Score = 32.5 bits (75), Expect = 0.067
Identities = 8/23 (34%), Positives = 14/23 (60%)
Query: 920 HINTHTGNKPYQCQICKKSFANK 942
++ TG KP++C C K F+ +
Sbjct: 3 SGSSGTGEKPFKCVECGKGFSRR 25
Score = 31.3 bits (72), Expect = 0.17
Identities = 12/45 (26%), Positives = 16/45 (35%), Gaps = 6/45 (13%)
Query: 652 HMIIHTGIKEHQCHVCNTAFYHIRSLSRHLKIH--EYNESKMYKC 694
TG K +C C F +L+ H K+H E K
Sbjct: 3 SGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGE----KPSGP 43
Score = 29.4 bits (67), Expect = 0.92
Identities = 11/30 (36%), Positives = 16/30 (53%)
Query: 592 VHSSIKRYMCDICGKQFTTLSYLDLHRKSH 621
+ K + C CGK F+ S L++H K H
Sbjct: 6 SGTGEKPFKCVECGKGFSRRSALNVHHKLH 35
Score = 29.4 bits (67), Expect = 0.92
Identities = 13/35 (37%), Positives = 15/35 (42%), Gaps = 2/35 (5%)
Query: 989 GDKCHICKVCGAKI--KGNLQKHMLSHTGEKPFCC 1021
G+K C CG + L H HTGEKP
Sbjct: 9 GEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGP 43
Score = 26.7 bits (60), Expect = 7.8
Identities = 12/35 (34%), Positives = 15/35 (42%), Gaps = 2/35 (5%)
Query: 1946 GDKCHVCKVCGAKI--KGNMKRHMLSHTGEKPFCC 1978
G+K C CG + + H HTGEKP
Sbjct: 9 GEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGP 43
>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 57.1 bits (139), Expect = 1e-10
Identities = 18/37 (48%), Positives = 24/37 (64%)
Query: 1040 HTGERPYKCDVCGSSFKDKWYLGVHMRKHNGEKPYNC 1076
TGE+PY+C VCG +F + L VH R H+G+KP
Sbjct: 7 GTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGP 43
Score = 44.0 bits (105), Expect = 6e-06
Identities = 13/35 (37%), Positives = 18/35 (51%)
Query: 1062 GVHMRKHNGEKPYNCDYCGQTFAARSTFTFHLKKH 1096
G GEKPY C CG+ F+ R + + H + H
Sbjct: 1 GSSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIH 35
Score = 41.7 bits (99), Expect = 4e-05
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Query: 1965 RHMLSHTGEKPFCCDICGK--SLKGNLKAHILRCQGERPYKC 2004
S TGEKP+ C +CGK S + +L H G++P
Sbjct: 2 SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGP 43
Score = 38.3 bits (90), Expect = 6e-04
Identities = 13/38 (34%), Positives = 17/38 (44%)
Query: 895 IKTIERKFECDYCKMKFKSKSFLSEHINTHTGNKPYQC 932
T E+ +EC C F + LS H H+G KP
Sbjct: 6 SGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGP 43
Score = 37.5 bits (88), Expect = 0.001
Identities = 11/31 (35%), Positives = 13/31 (41%)
Query: 1511 FECDFCKKKFYRNFDLQEHINTHTGNKPYQC 1541
+EC C K F L H H+G KP
Sbjct: 13 YECSVCGKAFSHRQSLSVHQRIHSGKKPSGP 43
Score = 35.6 bits (83), Expect = 0.006
Identities = 15/30 (50%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
Query: 1998 GERPYKCDVCGSSFKDKKHFSVHIRNH-GE 2026
GE+PY+C VCG +F ++ SVH R H G+
Sbjct: 9 GEKPYECSVCGKAFSHRQSLSVHQRIHSGK 38
Score = 35.6 bits (83), Expect = 0.006
Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 4/35 (11%)
Query: 1529 HINTHTGNKPYQCQICNKSFGTRRNYRLHLKRHKR 1563
++ TG KPY+C +C K+F ++R L H+R
Sbjct: 3 SGSSGTGEKPYECSVCGKAF----SHRQSLSVHQR 33
Score = 35.6 bits (83), Expect = 0.007
Identities = 14/33 (42%), Positives = 18/33 (54%)
Query: 632 KKYECDSCNKKFWSKRALSEHMIIHTGIKEHQC 664
K YEC C K F +++LS H IH+G K
Sbjct: 11 KPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGP 43
Score = 34.4 bits (80), Expect = 0.015
Identities = 15/33 (45%), Positives = 19/33 (57%)
Query: 652 HMIIHTGIKEHQCHVCNTAFYHIRSLSRHLKIH 684
TG K ++C VC AF H +SLS H +IH
Sbjct: 3 SGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIH 35
Score = 34.0 bits (79), Expect = 0.019
Identities = 13/36 (36%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Query: 1352 TGNK-FECIYCKKKYRRKFDLKEHINKHTGNKPYHC 1386
TG K +EC C K + + L H H+G KP
Sbjct: 8 TGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGP 43
Score = 32.5 bits (75), Expect = 0.076
Identities = 10/25 (40%), Positives = 19/25 (76%)
Query: 920 HINTHTGNKPYQCQICKKSFANKRS 944
++ TG KPY+C +C K+F++++S
Sbjct: 3 SGSSGTGEKPYECSVCGKAFSHRQS 27
Score = 30.2 bits (69), Expect = 0.49
Identities = 12/35 (34%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
Query: 989 GDKCHICKVCGAKI--KGNLQKHMLSHTGEKPFCC 1021
G+K + C VCG + +L H H+G+KP
Sbjct: 9 GEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGP 43
Score = 28.2 bits (64), Expect = 2.8
Identities = 10/34 (29%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 588 HLRHVHSSIKRYMCDICGKQFTTLSYLDLHRKSH 621
+ K Y C +CGK F+ L +H++ H
Sbjct: 3 SGS-SGTGEKPYECSVCGKAFSHRQSLSVHQRIH 35
Score = 27.9 bits (63), Expect = 3.0
Identities = 9/30 (30%), Positives = 15/30 (50%)
Query: 430 ECDYCKRKFTCKRYLAEHINAHTGNTIYGC 459
EC C + F+ ++ L+ H H+G G
Sbjct: 14 ECSVCGKAFSHRQSLSVHQRIHSGKKPSGP 43
Score = 27.1 bits (61), Expect = 5.5
Identities = 11/35 (31%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
Query: 1946 GDKCHVCKVCGAKI--KGNMKRHMLSHTGEKPFCC 1978
G+K + C VCG + ++ H H+G+KP
Sbjct: 9 GEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGP 43
>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 44
Score = 57.1 bits (139), Expect = 2e-10
Identities = 16/37 (43%), Positives = 21/37 (56%)
Query: 1040 HTGERPYKCDVCGSSFKDKWYLGVHMRKHNGEKPYNC 1076
TGE+PY+C+ C +F K L VH R H GE +
Sbjct: 7 GTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS 43
Score = 48.6 bits (117), Expect = 1e-07
Identities = 17/42 (40%), Positives = 21/42 (50%), Gaps = 3/42 (7%)
Query: 1009 HMLSHTGEKPFCCHICGK--SLKGNLKDHILKCHTGERPYKC 1048
S TGEKP+ C+ C K + K NL H + HTGE
Sbjct: 3 SGSSGTGEKPYECNECQKAFNTKSNLMVH-QRTHTGESGPSS 43
Score = 44.4 bits (106), Expect = 4e-06
Identities = 12/35 (34%), Positives = 16/35 (45%)
Query: 1062 GVHMRKHNGEKPYNCDYCGQTFAARSTFTFHLKKH 1096
G GEKPY C+ C + F +S H + H
Sbjct: 1 GSSGSSGTGEKPYECNECQKAFNTKSNLMVHQRTH 35
Score = 41.7 bits (99), Expect = 4e-05
Identities = 15/41 (36%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 1966 HMLSHTGEKPFCCDICGK--SLKGNLKAHILRCQGERPYKC 2004
S TGEKP+ C+ C K + K NL H GE
Sbjct: 3 SGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS 43
Score = 39.4 bits (93), Expect = 2e-04
Identities = 14/38 (36%), Positives = 19/38 (50%)
Query: 895 IKTIERKFECDYCKMKFKSKSFLSEHINTHTGNKPYQC 932
T E+ +EC+ C+ F +KS L H THTG
Sbjct: 6 SGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS 43
Score = 38.6 bits (91), Expect = 4e-04
Identities = 11/31 (35%), Positives = 15/31 (48%)
Query: 1511 FECDFCKKKFYRNFDLQEHINTHTGNKPYQC 1541
+EC+ C+K F +L H THTG
Sbjct: 13 YECNECQKAFNTKSNLMVHQRTHTGESGPSS 43
Score = 36.7 bits (86), Expect = 0.002
Identities = 13/33 (39%), Positives = 20/33 (60%)
Query: 1529 HINTHTGNKPYQCQICNKSFGTRRNYRLHLKRH 1561
++ TG KPY+C C K+F T+ N +H + H
Sbjct: 3 SGSSGTGEKPYECNECQKAFNTKSNLMVHQRTH 35
Score = 35.9 bits (84), Expect = 0.004
Identities = 14/30 (46%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Query: 1998 GERPYKCDVCGSSFKDKKHFSVHIRNH-GE 2026
GE+PY+C+ C +F K + VH R H GE
Sbjct: 9 GEKPYECNECQKAFNTKSNLMVHQRTHTGE 38
Score = 35.1 bits (82), Expect = 0.007
Identities = 13/33 (39%), Positives = 15/33 (45%)
Query: 632 KKYECDSCNKKFWSKRALSEHMIIHTGIKEHQC 664
K YEC+ C K F +K L H HTG
Sbjct: 11 KPYECNECQKAFNTKSNLMVHQRTHTGESGPSS 43
Score = 34.4 bits (80), Expect = 0.014
Identities = 13/36 (36%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Query: 1352 TGNK-FECIYCKKKYRRKFDLKEHINKHTGNKPYHC 1386
TG K +EC C+K + K +L H HTG
Sbjct: 8 TGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS 43
Score = 33.6 bits (78), Expect = 0.026
Identities = 10/23 (43%), Positives = 15/23 (65%)
Query: 920 HINTHTGNKPYQCQICKKSFANK 942
++ TG KPY+C C+K+F K
Sbjct: 3 SGSSGTGEKPYECNECQKAFNTK 25
Score = 30.9 bits (71), Expect = 0.25
Identities = 12/35 (34%), Positives = 15/35 (42%), Gaps = 2/35 (5%)
Query: 989 GDKCHICKVCGAKI--KGNLQKHMLSHTGEKPFCC 1021
G+K + C C K NL H +HTGE
Sbjct: 9 GEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS 43
Score = 30.1 bits (69), Expect = 0.50
Identities = 10/33 (30%), Positives = 15/33 (45%)
Query: 652 HMIIHTGIKEHQCHVCNTAFYHIRSLSRHLKIH 684
TG K ++C+ C AF +L H + H
Sbjct: 3 SGSSGTGEKPYECNECQKAFNTKSNLMVHQRTH 35
Score = 28.6 bits (65), Expect = 1.6
Identities = 11/34 (32%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 588 HLRHVHSSIKRYMCDICGKQFTTLSYLDLHRKSH 621
+ K Y C+ C K F T S L +H+++H
Sbjct: 3 SGS-SGTGEKPYECNECQKAFNTKSNLMVHQRTH 35
Score = 27.8 bits (63), Expect = 2.9
Identities = 11/35 (31%), Positives = 15/35 (42%), Gaps = 2/35 (5%)
Query: 1946 GDKCHVCKVCGAKI--KGNMKRHMLSHTGEKPFCC 1978
G+K + C C K N+ H +HTGE
Sbjct: 9 GEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS 43
Score = 27.1 bits (61), Expect = 6.1
Identities = 10/30 (33%), Positives = 14/30 (46%)
Query: 430 ECDYCKRKFTCKRYLAEHINAHTGNTIYGC 459
EC+ C++ F K L H HTG +
Sbjct: 14 ECNECQKAFNTKSNLMVHQRTHTGESGPSS 43
Score = 26.7 bits (60), Expect = 9.2
Identities = 8/20 (40%), Positives = 12/20 (60%)
Query: 1374 HINKHTGNKPYHCQICKESF 1393
+ TG KPY C C+++F
Sbjct: 3 SGSSGTGEKPYECNECQKAF 22
>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 57.1 bits (139), Expect = 2e-10
Identities = 17/37 (45%), Positives = 22/37 (59%)
Query: 1040 HTGERPYKCDVCGSSFKDKWYLGVHMRKHNGEKPYNC 1076
TGE+PY+C CG +F D+ L H + H GEKP
Sbjct: 7 GTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGP 43
Score = 48.7 bits (117), Expect = 1e-07
Identities = 19/42 (45%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Query: 1009 HMLSHTGEKPFCCHICGK--SLKGNLKDHILKCHTGERPYKC 1048
S TGEKP+ C CGK + + NL H K HTGE+P
Sbjct: 3 SGSSGTGEKPYRCAECGKAFTDRSNLFTH-QKIHTGEKPSGP 43
Score = 41.3 bits (98), Expect = 5e-05
Identities = 17/46 (36%), Positives = 21/46 (45%), Gaps = 10/46 (21%)
Query: 1965 RHMLSHTGEKPFCCDICGK--SLKGNLKAHILRCQ----GERPYKC 2004
S TGEKP+ C CGK + + NL H Q GE+P
Sbjct: 2 SSGSSGTGEKPYRCAECGKAFTDRSNLFTH----QKIHTGEKPSGP 43
Score = 41.3 bits (98), Expect = 5e-05
Identities = 15/35 (42%), Positives = 16/35 (45%)
Query: 1062 GVHMRKHNGEKPYNCDYCGQTFAARSTFTFHLKKH 1096
G GEKPY C CG+ F RS H K H
Sbjct: 1 GSSGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIH 35
Score = 36.7 bits (86), Expect = 0.002
Identities = 12/35 (34%), Positives = 19/35 (54%), Gaps = 4/35 (11%)
Query: 1529 HINTHTGNKPYQCQICNKSFGTRRNYRLHLKRHKR 1563
++ TG KPY+C C K+F R +L H++
Sbjct: 3 SGSSGTGEKPYRCAECGKAF----TDRSNLFTHQK 33
Score = 36.7 bits (86), Expect = 0.003
Identities = 13/38 (34%), Positives = 16/38 (42%)
Query: 895 IKTIERKFECDYCKMKFKSKSFLSEHINTHTGNKPYQC 932
T E+ + C C F +S L H HTG KP
Sbjct: 6 SGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGP 43
Score = 36.3 bits (85), Expect = 0.003
Identities = 13/30 (43%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Query: 1998 GERPYKCDVCGSSFKDKKHFSVHIRNH-GE 2026
GE+PY+C CG +F D+ + H + H GE
Sbjct: 9 GEKPYRCAECGKAFTDRSNLFTHQKIHTGE 38
Score = 35.9 bits (84), Expect = 0.005
Identities = 11/31 (35%), Positives = 13/31 (41%)
Query: 1511 FECDFCKKKFYRNFDLQEHINTHTGNKPYQC 1541
+ C C K F +L H HTG KP
Sbjct: 13 YRCAECGKAFTDRSNLFTHQKIHTGEKPSGP 43
Score = 33.6 bits (78), Expect = 0.031
Identities = 13/36 (36%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Query: 1352 TGNK-FECIYCKKKYRRKFDLKEHINKHTGNKPYHC 1386
TG K + C C K + + +L H HTG KP
Sbjct: 8 TGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGP 43
Score = 33.3 bits (77), Expect = 0.039
Identities = 13/33 (39%), Positives = 14/33 (42%)
Query: 632 KKYECDSCNKKFWSKRALSEHMIIHTGIKEHQC 664
K Y C C K F + L H IHTG K
Sbjct: 11 KPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGP 43
Score = 32.5 bits (75), Expect = 0.066
Identities = 9/23 (39%), Positives = 15/23 (65%)
Query: 920 HINTHTGNKPYQCQICKKSFANK 942
++ TG KPY+C C K+F ++
Sbjct: 3 SGSSGTGEKPYRCAECGKAFTDR 25
Score = 32.1 bits (74), Expect = 0.11
Identities = 14/45 (31%), Positives = 17/45 (37%), Gaps = 6/45 (13%)
Query: 652 HMIIHTGIKEHQCHVCNTAFYHIRSLSRHLKIH--EYNESKMYKC 694
TG K ++C C AF +L H KIH E K
Sbjct: 3 SGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGE----KPSGP 43
Score = 31.7 bits (73), Expect = 0.15
Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
Query: 989 GDKCHICKVCGA--KIKGNLQKHMLSHTGEKPFCC 1021
G+K + C CG + NL H HTGEKP
Sbjct: 9 GEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGP 43
Score = 29.4 bits (67), Expect = 0.84
Identities = 13/30 (43%), Positives = 15/30 (50%)
Query: 592 VHSSIKRYMCDICGKQFTTLSYLDLHRKSH 621
+ K Y C CGK FT S L H+K H
Sbjct: 6 SGTGEKPYRCAECGKAFTDRSNLFTHQKIH 35
Score = 28.6 bits (65), Expect = 1.7
Identities = 13/35 (37%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
Query: 1946 GDKCHVCKVCGA--KIKGNMKRHMLSHTGEKPFCC 1978
G+K + C CG + N+ H HTGEKP
Sbjct: 9 GEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGP 43
Score = 27.9 bits (63), Expect = 3.3
Identities = 12/33 (36%), Positives = 16/33 (48%), Gaps = 4/33 (12%)
Query: 1374 HINKHTGNKPYHCQICKESFYTLKTYRGDLKRH 1406
+ TG KPY C C ++F T R +L H
Sbjct: 3 SGSSGTGEKPYRCAECGKAF----TDRSNLFTH 31
Score = 26.7 bits (60), Expect = 8.3
Identities = 10/30 (33%), Positives = 12/30 (40%)
Query: 430 ECDYCKRKFTCKRYLAEHINAHTGNTIYGC 459
C C + FT + L H HTG G
Sbjct: 14 RCAECGKAFTDRSNLFTHQKIHTGEKPSGP 43
>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} PDB: 2yta_A
Length = 42
Score = 56.9 bits (138), Expect = 2e-10
Identities = 14/35 (40%), Positives = 16/35 (45%)
Query: 1040 HTGERPYKCDVCGSSFKDKWYLGVHMRKHNGEKPY 1074
GE PY C CG SF + L VH R + P
Sbjct: 6 SGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPS 40
Score = 41.1 bits (97), Expect = 7e-05
Identities = 14/37 (37%), Positives = 17/37 (45%), Gaps = 2/37 (5%)
Query: 1969 SHTGEKPFCCDICGKSL--KGNLKAHILRCQGERPYK 2003
S GE P+ C CGKS +G+L H C P
Sbjct: 5 SSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSS 41
Score = 40.0 bits (94), Expect = 2e-04
Identities = 10/33 (30%), Positives = 14/33 (42%)
Query: 1064 HMRKHNGEKPYNCDYCGQTFAARSTFTFHLKKH 1096
GE PY C CG++F R + H +
Sbjct: 2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSC 34
Score = 40.0 bits (94), Expect = 2e-04
Identities = 12/31 (38%), Positives = 16/31 (51%)
Query: 1998 GERPYKCDVCGSSFKDKKHFSVHIRNHGEDK 2028
GE PY C CG SF + +VH R+ +
Sbjct: 8 GETPYLCGQCGKSFTQRGSLAVHQRSCSQSG 38
Score = 34.6 bits (80), Expect = 0.012
Identities = 10/33 (30%), Positives = 14/33 (42%)
Query: 1529 HINTHTGNKPYQCQICNKSFGTRRNYRLHLKRH 1561
+ G PY C C KSF R + +H +
Sbjct: 2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSC 34
Score = 34.2 bits (79), Expect = 0.015
Identities = 9/33 (27%), Positives = 15/33 (45%), Gaps = 2/33 (6%)
Query: 989 GDKCHICKVCGA--KIKGNLQKHMLSHTGEKPF 1019
G+ ++C CG +G+L H S + P
Sbjct: 8 GETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPS 40
Score = 32.6 bits (75), Expect = 0.061
Identities = 7/32 (21%), Positives = 13/32 (40%)
Query: 899 ERKFECDYCKMKFKSKSFLSEHINTHTGNKPY 930
E + C C F + L+ H + + + P
Sbjct: 9 ETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPS 40
Score = 32.3 bits (74), Expect = 0.093
Identities = 7/29 (24%), Positives = 11/29 (37%)
Query: 632 KKYECDSCNKKFWSKRALSEHMIIHTGIK 660
Y C C K F + +L+ H +
Sbjct: 10 TPYLCGQCGKSFTQRGSLAVHQRSCSQSG 38
Score = 31.9 bits (73), Expect = 0.13
Identities = 8/33 (24%), Positives = 15/33 (45%), Gaps = 2/33 (6%)
Query: 1946 GDKCHVCKVCGA--KIKGNMKRHMLSHTGEKPF 1976
G+ ++C CG +G++ H S + P
Sbjct: 8 GETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPS 40
Score = 31.5 bits (72), Expect = 0.14
Identities = 9/25 (36%), Positives = 11/25 (44%)
Query: 920 HINTHTGNKPYQCQICKKSFANKRS 944
+ G PY C C KSF + S
Sbjct: 2 SSGSSGGETPYLCGQCGKSFTQRGS 26
Score = 31.5 bits (72), Expect = 0.17
Identities = 7/29 (24%), Positives = 12/29 (41%)
Query: 1511 FECDFCKKKFYRNFDLQEHINTHTGNKPY 1539
+ C C K F + L H + + + P
Sbjct: 12 YLCGQCGKSFTQRGSLAVHQRSCSQSGPS 40
Score = 30.7 bits (70), Expect = 0.29
Identities = 9/36 (25%), Positives = 15/36 (41%), Gaps = 1/36 (2%)
Query: 1350 SSTGNK-FECIYCKKKYRRKFDLKEHINKHTGNKPY 1384
SS G + C C K + ++ L H + + P
Sbjct: 5 SSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPS 40
Score = 29.9 bits (68), Expect = 0.65
Identities = 12/34 (35%), Positives = 14/34 (41%), Gaps = 4/34 (11%)
Query: 1374 HINKHTGNKPYHCQICKESFYTLKTYRGDLKRHE 1407
G PY C C +SF T RG L H+
Sbjct: 2 SSGSSGGETPYLCGQCGKSF----TQRGSLAVHQ 31
Score = 29.9 bits (68), Expect = 0.65
Identities = 10/30 (33%), Positives = 15/30 (50%)
Query: 593 HSSIKRYMCDICGKQFTTLSYLDLHRKSHN 622
Y+C CGK FT L +H++S +
Sbjct: 6 SGGETPYLCGQCGKSFTQRGSLAVHQRSCS 35
Score = 27.2 bits (61), Expect = 4.8
Identities = 7/29 (24%), Positives = 11/29 (37%)
Query: 656 HTGIKEHQCHVCNTAFYHIRSLSRHLKIH 684
G + C C +F SL+ H +
Sbjct: 6 SGGETPYLCGQCGKSFTQRGSLAVHQRSC 34
Score = 27.2 bits (61), Expect = 5.3
Identities = 9/25 (36%), Positives = 12/25 (48%)
Query: 1320 HTSQKRYLCDICGKQFTSTNRVNIH 1344
+ YLC CGK FT + +H
Sbjct: 6 SGGETPYLCGQCGKSFTQRGSLAVH 30
>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens}
Length = 46
Score = 56.8 bits (138), Expect = 2e-10
Identities = 19/39 (48%), Positives = 22/39 (56%)
Query: 1038 KCHTGERPYKCDVCGSSFKDKWYLGVHMRKHNGEKPYNC 1076
TG+RPY+C CG +FK K L H R H GEKP
Sbjct: 5 SSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGP 43
Score = 48.3 bits (116), Expect = 2e-07
Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
Query: 1008 KHMLSHTGEKPFCCHICGK--SLKGNLKDHILKCHTGERPYKC 1048
S TG++P+ C CGK K +L H + HTGE+P
Sbjct: 2 SSGSSGTGQRPYECIECGKAFKTKSSLICH-RRSHTGEKPSGP 43
Score = 41.8 bits (99), Expect = 4e-05
Identities = 11/35 (31%), Positives = 17/35 (48%)
Query: 1062 GVHMRKHNGEKPYNCDYCGQTFAARSTFTFHLKKH 1096
G G++PY C CG+ F +S+ H + H
Sbjct: 1 GSSGSSGTGQRPYECIECGKAFKTKSSLICHRRSH 35
Score = 41.0 bits (97), Expect = 8e-05
Identities = 14/42 (33%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Query: 1965 RHMLSHTGEKPFCCDICGK--SLKGNLKAHILRCQGERPYKC 2004
S TG++P+ C CGK K +L H GE+P
Sbjct: 2 SSGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGP 43
Score = 39.4 bits (93), Expect = 3e-04
Identities = 16/38 (42%), Positives = 20/38 (52%)
Query: 895 IKTIERKFECDYCKMKFKSKSFLSEHINTHTGNKPYQC 932
T +R +EC C FK+KS L H +HTG KP
Sbjct: 6 SGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGP 43
Score = 37.9 bits (89), Expect = 8e-04
Identities = 15/38 (39%), Positives = 17/38 (44%)
Query: 1504 IKTIQRKFECDFCKKKFYRNFDLQEHINTHTGNKPYQC 1541
T QR +EC C K F L H +HTG KP
Sbjct: 6 SGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGP 43
Score = 36.0 bits (84), Expect = 0.005
Identities = 11/35 (31%), Positives = 18/35 (51%), Gaps = 4/35 (11%)
Query: 1529 HINTHTGNKPYQCQICNKSFGTRRNYRLHLKRHKR 1563
++ TG +PY+C C K+F + L H+R
Sbjct: 3 SGSSGTGQRPYECIECGKAF----KTKSSLICHRR 33
Score = 35.6 bits (83), Expect = 0.005
Identities = 15/30 (50%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Query: 1998 GERPYKCDVCGSSFKDKKHFSVHIRNH-GE 2026
G+RPY+C CG +FK K H R+H GE
Sbjct: 9 GQRPYECIECGKAFKTKSSLICHRRSHTGE 38
Score = 34.8 bits (81), Expect = 0.011
Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Query: 1352 TGNK-FECIYCKKKYRRKFDLKEHINKHTGNKPYHC 1386
TG + +ECI C K ++ K L H HTG KP
Sbjct: 8 TGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGP 43
Score = 33.7 bits (78), Expect = 0.026
Identities = 13/33 (39%), Positives = 16/33 (48%)
Query: 632 KKYECDSCNKKFWSKRALSEHMIIHTGIKEHQC 664
+ YEC C K F +K +L H HTG K
Sbjct: 11 RPYECIECGKAFKTKSSLICHRRSHTGEKPSGP 43
Score = 33.3 bits (77), Expect = 0.044
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 920 HINTHTGNKPYQCQICKKSFANKRS 944
++ TG +PY+C C K+F K S
Sbjct: 3 SGSSGTGQRPYECIECGKAFKTKSS 27
Score = 31.7 bits (73), Expect = 0.15
Identities = 12/45 (26%), Positives = 16/45 (35%), Gaps = 6/45 (13%)
Query: 652 HMIIHTGIKEHQCHVCNTAFYHIRSLSRHLKIH--EYNESKMYKC 694
TG + ++C C AF SL H + H E K
Sbjct: 3 SGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGE----KPSGP 43
Score = 30.6 bits (70), Expect = 0.35
Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
Query: 989 GDKCHICKVCGA--KIKGNLQKHMLSHTGEKPFCC 1021
G + + C CG K K +L H SHTGEKP
Sbjct: 9 GQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGP 43
Score = 29.4 bits (67), Expect = 0.81
Identities = 13/34 (38%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 588 HLRHVHSSIKRYMCDICGKQFTTLSYLDLHRKSH 621
+ + Y C CGK F T S L HR+SH
Sbjct: 3 SGS-SGTGQRPYECIECGKAFKTKSSLICHRRSH 35
Score = 27.5 bits (62), Expect = 4.6
Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
Query: 1946 GDKCHVCKVCGA--KIKGNMKRHMLSHTGEKPFCC 1978
G + + C CG K K ++ H SHTGEKP
Sbjct: 9 GQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGP 43
Score = 27.1 bits (61), Expect = 6.5
Identities = 11/30 (36%), Positives = 13/30 (43%)
Query: 430 ECDYCKRKFTCKRYLAEHINAHTGNTIYGC 459
EC C + F K L H +HTG G
Sbjct: 14 ECIECGKAFKTKSSLICHRRSHTGEKPSGP 43
>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 56.8 bits (138), Expect = 2e-10
Identities = 19/37 (51%), Positives = 22/37 (59%)
Query: 1040 HTGERPYKCDVCGSSFKDKWYLGVHMRKHNGEKPYNC 1076
TGE+PYKC+ CG F+ YL H R H GEKP
Sbjct: 7 GTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGP 43
Score = 42.1 bits (100), Expect = 3e-05
Identities = 13/35 (37%), Positives = 17/35 (48%)
Query: 1062 GVHMRKHNGEKPYNCDYCGQTFAARSTFTFHLKKH 1096
G GEKPY C+ CG+ F S + H + H
Sbjct: 1 GSSGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIH 35
Score = 41.0 bits (97), Expect = 8e-05
Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 6/44 (13%)
Query: 1965 RHMLSHTGEKPFCCDICGKSLKGNLKAHILRCQ----GERPYKC 2004
S TGEKP+ C+ CGK +++ R Q GE+P
Sbjct: 2 SSGSSGTGEKPYKCNECGKVF--RHNSYLSRHQRIHTGEKPSGP 43
Score = 37.9 bits (89), Expect = 9e-04
Identities = 14/38 (36%), Positives = 20/38 (52%)
Query: 895 IKTIERKFECDYCKMKFKSKSFLSEHINTHTGNKPYQC 932
T E+ ++C+ C F+ S+LS H HTG KP
Sbjct: 6 SGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGP 43
Score = 37.5 bits (88), Expect = 0.001
Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 4/35 (11%)
Query: 1529 HINTHTGNKPYQCQICNKSFGTRRNYRLHLKRHKR 1563
++ TG KPY+C C K F + +L RH+R
Sbjct: 3 SGSSGTGEKPYKCNECGKVF----RHNSYLSRHQR 33
Score = 36.7 bits (86), Expect = 0.002
Identities = 12/31 (38%), Positives = 15/31 (48%)
Query: 1511 FECDFCKKKFYRNFDLQEHINTHTGNKPYQC 1541
++C+ C K F N L H HTG KP
Sbjct: 13 YKCNECGKVFRHNSYLSRHQRIHTGEKPSGP 43
Score = 35.2 bits (82), Expect = 0.008
Identities = 15/30 (50%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Query: 1998 GERPYKCDVCGSSFKDKKHFSVHIRNH-GE 2026
GE+PYKC+ CG F+ + S H R H GE
Sbjct: 9 GEKPYKCNECGKVFRHNSYLSRHQRIHTGE 38
Score = 34.0 bits (79), Expect = 0.019
Identities = 14/34 (41%), Positives = 16/34 (47%)
Query: 632 KKYECDSCNKKFWSKRALSEHMIIHTGIKEHQCH 665
K Y+C+ C K F LS H IHTG K
Sbjct: 11 KPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPS 44
Score = 34.0 bits (79), Expect = 0.022
Identities = 14/43 (32%), Positives = 18/43 (41%), Gaps = 2/43 (4%)
Query: 652 HMIIHTGIKEHQCHVCNTAFYHIRSLSRHLKIHEYNESKMYKC 694
TG K ++C+ C F H LSRH +IH K
Sbjct: 3 SGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIH--TGEKPSGP 43
Score = 33.6 bits (78), Expect = 0.031
Identities = 14/36 (38%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Query: 1352 TGNK-FECIYCKKKYRRKFDLKEHINKHTGNKPYHC 1386
TG K ++C C K +R L H HTG KP
Sbjct: 8 TGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGP 43
Score = 31.7 bits (73), Expect = 0.13
Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 4/34 (11%)
Query: 920 HINTHTGNKPYQCQICKKSFANKRSYQRDLKRHK 953
++ TG KPY+C C K F SY L RH+
Sbjct: 3 SGSSGTGEKPYKCNECGKVF-RHNSY---LSRHQ 32
Score = 29.4 bits (67), Expect = 0.97
Identities = 12/34 (35%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 588 HLRHVHSSIKRYMCDICGKQFTTLSYLDLHRKSH 621
+ K Y C+ CGK F SYL H++ H
Sbjct: 3 SGS-SGTGEKPYKCNECGKVFRHNSYLSRHQRIH 35
Score = 29.4 bits (67), Expect = 1.1
Identities = 13/36 (36%), Positives = 17/36 (47%), Gaps = 2/36 (5%)
Query: 989 GDKCHICKVCGA--KIKGNLQKHMLSHTGEKPFCCH 1022
G+K + C CG + L +H HTGEKP
Sbjct: 9 GEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPS 44
Score = 27.1 bits (61), Expect = 6.1
Identities = 13/35 (37%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
Query: 1946 GDKCHVCKVCGA--KIKGNMKRHMLSHTGEKPFCC 1978
G+K + C CG + + RH HTGEKP
Sbjct: 9 GEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGP 43
Score = 27.1 bits (61), Expect = 6.5
Identities = 10/30 (33%), Positives = 14/30 (46%)
Query: 430 ECDYCKRKFTCKRYLAEHINAHTGNTIYGC 459
+C+ C + F YL+ H HTG G
Sbjct: 14 KCNECGKVFRHNSYLSRHQRIHTGEKPSGP 43
Score = 26.7 bits (60), Expect = 9.7
Identities = 12/33 (36%), Positives = 16/33 (48%), Gaps = 3/33 (9%)
Query: 1560 RHKRSAGQLKPEDIHECKICHKIFLENSRLTRH 1592
S KP ++C C K+F NS L+RH
Sbjct: 2 SSGSSGTGEKP---YKCNECGKVFRHNSYLSRH 31
>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 56.8 bits (138), Expect = 2e-10
Identities = 14/37 (37%), Positives = 19/37 (51%)
Query: 1040 HTGERPYKCDVCGSSFKDKWYLGVHMRKHNGEKPYNC 1076
G++ +KC+ C +F L VH R H GEKP
Sbjct: 7 GAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGP 43
Score = 47.5 bits (114), Expect = 4e-07
Identities = 14/42 (33%), Positives = 20/42 (47%), Gaps = 3/42 (7%)
Query: 1009 HMLSHTGEKPFCCHICGK--SLKGNLKDHILKCHTGERPYKC 1048
S G+K F C+ C K + +L H + HTGE+P
Sbjct: 3 SGSSGAGKKLFKCNECKKTFTQSSSLTVH-QRIHTGEKPSGP 43
Score = 42.1 bits (100), Expect = 3e-05
Identities = 11/35 (31%), Positives = 17/35 (48%)
Query: 1062 GVHMRKHNGEKPYNCDYCGQTFAARSTFTFHLKKH 1096
G G+K + C+ C +TF S+ T H + H
Sbjct: 1 GSSGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIH 35
Score = 40.6 bits (96), Expect = 1e-04
Identities = 12/41 (29%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 1966 HMLSHTGEKPFCCDICGK--SLKGNLKAHILRCQGERPYKC 2004
S G+K F C+ C K + +L H GE+P
Sbjct: 3 SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGP 43
Score = 38.3 bits (90), Expect = 7e-04
Identities = 13/38 (34%), Positives = 18/38 (47%)
Query: 895 IKTIERKFECDYCKMKFKSKSFLSEHINTHTGNKPYQC 932
++ F+C+ CK F S L+ H HTG KP
Sbjct: 6 SGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGP 43
Score = 37.1 bits (87), Expect = 0.002
Identities = 13/31 (41%), Positives = 17/31 (54%)
Query: 1511 FECDFCKKKFYRNFDLQEHINTHTGNKPYQC 1541
F+C+ CKK F ++ L H HTG KP
Sbjct: 13 FKCNECKKTFTQSSSLTVHQRIHTGEKPSGP 43
Score = 35.9 bits (84), Expect = 0.004
Identities = 11/30 (36%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Query: 1998 GERPYKCDVCGSSFKDKKHFSVHIRNH-GE 2026
G++ +KC+ C +F +VH R H GE
Sbjct: 9 GKKLFKCNECKKTFTQSSSLTVHQRIHTGE 38
Score = 35.6 bits (83), Expect = 0.006
Identities = 9/35 (25%), Positives = 15/35 (42%), Gaps = 4/35 (11%)
Query: 1529 HINTHTGNKPYQCQICNKSFGTRRNYRLHLKRHKR 1563
++ G K ++C C K+F L H+R
Sbjct: 3 SGSSGAGKKLFKCNECKKTF----TQSSSLTVHQR 33
Score = 34.4 bits (80), Expect = 0.017
Identities = 12/33 (36%), Positives = 17/33 (51%)
Query: 632 KKYECDSCNKKFWSKRALSEHMIIHTGIKEHQC 664
K ++C+ C K F +L+ H IHTG K
Sbjct: 11 KLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGP 43
Score = 33.3 bits (77), Expect = 0.039
Identities = 14/36 (38%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Query: 1352 TGNK-FECIYCKKKYRRKFDLKEHINKHTGNKPYHC 1386
G K F+C CKK + + L H HTG KP
Sbjct: 8 AGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGP 43
Score = 32.1 bits (74), Expect = 0.089
Identities = 7/23 (30%), Positives = 12/23 (52%)
Query: 920 HINTHTGNKPYQCQICKKSFANK 942
++ G K ++C CKK+F
Sbjct: 3 SGSSGAGKKLFKCNECKKTFTQS 25
Score = 32.1 bits (74), Expect = 0.11
Identities = 12/45 (26%), Positives = 16/45 (35%), Gaps = 6/45 (13%)
Query: 652 HMIIHTGIKEHQCHVCNTAFYHIRSLSRHLKIH--EYNESKMYKC 694
G K +C+ C F SL+ H +IH E K
Sbjct: 3 SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGE----KPSGP 43
Score = 29.0 bits (66), Expect = 1.2
Identities = 10/30 (33%), Positives = 16/30 (53%)
Query: 592 VHSSIKRYMCDICGKQFTTLSYLDLHRKSH 621
+ K + C+ C K FT S L +H++ H
Sbjct: 6 SGAGKKLFKCNECKKTFTQSSSLTVHQRIH 35
Score = 28.2 bits (64), Expect = 2.2
Identities = 12/35 (34%), Positives = 13/35 (37%), Gaps = 2/35 (5%)
Query: 989 GDKCHICKVCGAKI--KGNLQKHMLSHTGEKPFCC 1021
G K C C +L H HTGEKP
Sbjct: 9 GKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGP 43
Score = 27.1 bits (61), Expect = 6.2
Identities = 11/30 (36%), Positives = 14/30 (46%)
Query: 430 ECDYCKRKFTCKRYLAEHINAHTGNTIYGC 459
+C+ CK+ FT L H HTG G
Sbjct: 14 KCNECKKTFTQSSSLTVHQRIHTGEKPSGP 43
>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens}
Length = 46
Score = 56.8 bits (138), Expect = 2e-10
Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Query: 1040 HTGERPYKCDVCGSSFKDKWYLGVHMRKHNGEKPYNCDYCG 1080
+GE+P+KC+ CG F H R H+GEKP G
Sbjct: 7 GSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPS-SG 46
Score = 47.9 bits (115), Expect = 3e-07
Identities = 16/46 (34%), Positives = 20/46 (43%), Gaps = 4/46 (8%)
Query: 1009 HMLSHTGEKPFCCHICGK--SLKGNLKDHILKCHTGERPYKCDVCG 1052
S +GEKPF C CGK H + H+GE+P G
Sbjct: 3 SGSSGSGEKPFKCEECGKGFYTNSQCYSH-QRSHSGEKPSGPS-SG 46
Score = 40.6 bits (96), Expect = 9e-05
Identities = 15/45 (33%), Positives = 19/45 (42%), Gaps = 3/45 (6%)
Query: 1966 HMLSHTGEKPFCCDICGK--SLKGNLKAHILRCQGERPYKCDVCG 2008
S +GEKPF C+ CGK +H GE+P G
Sbjct: 3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPS-SG 46
Score = 40.6 bits (96), Expect = 1e-04
Identities = 12/35 (34%), Positives = 17/35 (48%)
Query: 1062 GVHMRKHNGEKPYNCDYCGQTFAARSTFTFHLKKH 1096
G +GEKP+ C+ CG+ F S H + H
Sbjct: 1 GSSGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSH 35
Score = 39.1 bits (92), Expect = 3e-04
Identities = 12/32 (37%), Positives = 16/32 (50%)
Query: 1511 FECDFCKKKFYRNFDLQEHINTHTGNKPYQCQ 1542
F+C+ C K FY N H +H+G KP
Sbjct: 13 FKCEECGKGFYTNSQCYSHQRSHSGEKPSGPS 44
Score = 38.3 bits (90), Expect = 6e-04
Identities = 11/39 (28%), Positives = 18/39 (46%)
Query: 895 IKTIERKFECDYCKMKFKSKSFLSEHINTHTGNKPYQCQ 933
+ E+ F+C+ C F + S H +H+G KP
Sbjct: 6 SGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPS 44
Score = 36.4 bits (85), Expect = 0.003
Identities = 9/35 (25%), Positives = 16/35 (45%), Gaps = 4/35 (11%)
Query: 1529 HINTHTGNKPYQCQICNKSFGTRRNYRLHLKRHKR 1563
++ +G KP++C+ C K F H+R
Sbjct: 3 SGSSGSGEKPFKCEECGKGF----YTNSQCYSHQR 33
Score = 35.6 bits (83), Expect = 0.006
Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Query: 1998 GERPYKCDVCGSSFKDKKHFSVHIRNH-GE 2026
GE+P+KC+ CG F H R+H GE
Sbjct: 9 GEKPFKCEECGKGFYTNSQCYSHQRSHSGE 38
Score = 33.7 bits (78), Expect = 0.028
Identities = 11/37 (29%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
Query: 1352 TGNK-FECIYCKKKYRRKFDLKEHINKHTGNKPYHCQ 1387
+G K F+C C K + H H+G KP
Sbjct: 8 SGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPS 44
Score = 33.7 bits (78), Expect = 0.032
Identities = 10/31 (32%), Positives = 17/31 (54%), Gaps = 3/31 (9%)
Query: 920 HINTHTGNKPYQCQICKKSFANK---RSYQR 947
++ +G KP++C+ C K F S+QR
Sbjct: 3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQR 33
Score = 32.9 bits (76), Expect = 0.046
Identities = 9/33 (27%), Positives = 15/33 (45%)
Query: 632 KKYECDSCNKKFWSKRALSEHMIIHTGIKEHQC 664
K ++C+ C K F++ H H+G K
Sbjct: 11 KPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGP 43
Score = 32.1 bits (74), Expect = 0.10
Identities = 12/35 (34%), Positives = 15/35 (42%), Gaps = 2/35 (5%)
Query: 989 GDKCHICKVCGA--KIKGNLQKHMLSHTGEKPFCC 1021
G+K C+ CG H SH+GEKP
Sbjct: 9 GEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGP 43
Score = 31.0 bits (71), Expect = 0.27
Identities = 8/33 (24%), Positives = 11/33 (33%)
Query: 652 HMIIHTGIKEHQCHVCNTAFYHIRSLSRHLKIH 684
+G K +C C FY H + H
Sbjct: 3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSH 35
Score = 30.6 bits (70), Expect = 0.34
Identities = 13/39 (33%), Positives = 16/39 (41%), Gaps = 3/39 (7%)
Query: 1946 GDKCHVCKVCGA--KIKGNMKRHMLSHTGEKPFCCDICG 1982
G+K C+ CG H SH+GEKP G
Sbjct: 9 GEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPS-SG 46
Score = 29.8 bits (68), Expect = 0.64
Identities = 12/30 (40%), Positives = 16/30 (53%)
Query: 592 VHSSIKRYMCDICGKQFTTLSYLDLHRKSH 621
S K + C+ CGK F T S H++SH
Sbjct: 6 SGSGEKPFKCEECGKGFYTNSQCYSHQRSH 35
Score = 27.1 bits (61), Expect = 5.7
Identities = 7/30 (23%), Positives = 12/30 (40%)
Query: 430 ECDYCKRKFTCKRYLAEHINAHTGNTIYGC 459
+C+ C + F H +H+G G
Sbjct: 14 KCEECGKGFYTNSQCYSHQRSHSGEKPSGP 43
Score = 26.7 bits (60), Expect = 8.7
Identities = 7/33 (21%), Positives = 12/33 (36%), Gaps = 4/33 (12%)
Query: 1374 HINKHTGNKPYHCQICKESFYTLKTYRGDLKRH 1406
+ +G KP+ C+ C + F H
Sbjct: 3 SGSSGSGEKPFKCEECGKGF----YTNSQCYSH 31
>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 56.8 bits (138), Expect = 2e-10
Identities = 17/37 (45%), Positives = 23/37 (62%)
Query: 1040 HTGERPYKCDVCGSSFKDKWYLGVHMRKHNGEKPYNC 1076
TGE+PYKC VCG +F+ +L H H+GE+P
Sbjct: 7 GTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGP 43
Score = 46.7 bits (112), Expect = 6e-07
Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
Query: 1008 KHMLSHTGEKPFCCHICGK--SLKGNLKDHILKCHTGERPYKC 1048
S TGEKP+ C +CGK + +L H H+GERP
Sbjct: 2 SSGSSGTGEKPYKCQVCGKAFRVSSHLVQH-HSVHSGERPSGP 43
Score = 41.3 bits (98), Expect = 5e-05
Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 6/44 (13%)
Query: 1965 RHMLSHTGEKPFCCDICGKSLKGNLKAHILRCQ----GERPYKC 2004
S TGEKP+ C +CGK+ + +H+++ GERP
Sbjct: 2 SSGSSGTGEKPYKCQVCGKAF--RVSSHLVQHHSVHSGERPSGP 43
Score = 39.4 bits (93), Expect = 2e-04
Identities = 13/36 (36%), Positives = 19/36 (52%), Gaps = 4/36 (11%)
Query: 1528 EHINTHTGNKPYQCQICNKSFGTRRNYRLHLKRHKR 1563
++ TG KPY+CQ+C K+F HL +H
Sbjct: 2 SSGSSGTGEKPYKCQVCGKAF----RVSSHLVQHHS 33
Score = 38.6 bits (91), Expect = 5e-04
Identities = 12/33 (36%), Positives = 13/33 (39%)
Query: 1064 HMRKHNGEKPYNCDYCGQTFAARSTFTFHLKKH 1096
GEKPY C CG+ F S H H
Sbjct: 3 SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVH 35
Score = 37.1 bits (87), Expect = 0.002
Identities = 11/38 (28%), Positives = 19/38 (50%)
Query: 895 IKTIERKFECDYCKMKFKSKSFLSEHINTHTGNKPYQC 932
T E+ ++C C F+ S L +H + H+G +P
Sbjct: 6 SGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGP 43
Score = 35.6 bits (83), Expect = 0.006
Identities = 15/30 (50%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Query: 1998 GERPYKCDVCGSSFKDKKHFSVHIRNH-GE 2026
GE+PYKC VCG +F+ H H H GE
Sbjct: 9 GEKPYKCQVCGKAFRVSSHLVQHHSVHSGE 38
Score = 35.2 bits (82), Expect = 0.008
Identities = 11/44 (25%), Positives = 17/44 (38%), Gaps = 2/44 (4%)
Query: 651 EHMIIHTGIKEHQCHVCNTAFYHIRSLSRHLKIHEYNESKMYKC 694
TG K ++C VC AF L +H +H + +
Sbjct: 2 SSGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVH--SGERPSGP 43
Score = 35.2 bits (82), Expect = 0.009
Identities = 9/31 (29%), Positives = 16/31 (51%)
Query: 1511 FECDFCKKKFYRNFDLQEHINTHTGNKPYQC 1541
++C C K F + L +H + H+G +P
Sbjct: 13 YKCQVCGKAFRVSSHLVQHHSVHSGERPSGP 43
Score = 34.0 bits (79), Expect = 0.021
Identities = 10/33 (30%), Positives = 15/33 (45%)
Query: 632 KKYECDSCNKKFWSKRALSEHMIIHTGIKEHQC 664
K Y+C C K F L +H +H+G +
Sbjct: 11 KPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGP 43
Score = 32.9 bits (76), Expect = 0.049
Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 4/35 (11%)
Query: 919 EHINTHTGNKPYQCQICKKSFANKRSYQRDLKRHK 953
++ TG KPY+CQ+C K+F S+ L +H
Sbjct: 2 SSGSSGTGEKPYKCQVCGKAF-RVSSH---LVQHH 32
Score = 32.9 bits (76), Expect = 0.058
Identities = 12/36 (33%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Query: 1352 TGNK-FECIYCKKKYRRKFDLKEHINKHTGNKPYHC 1386
TG K ++C C K +R L +H + H+G +P
Sbjct: 8 TGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGP 43
Score = 30.6 bits (70), Expect = 0.38
Identities = 12/35 (34%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Query: 989 GDKCHICKVCGA--KIKGNLQKHMLSHTGEKPFCC 1021
G+K + C+VCG ++ +L +H H+GE+P
Sbjct: 9 GEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGP 43
Score = 28.2 bits (64), Expect = 2.2
Identities = 12/51 (23%), Positives = 18/51 (35%), Gaps = 8/51 (15%)
Query: 588 HLRHVHSSIKRYMCDICGKQFTTLSYLDLHRKSHNETVKRKEEDKKYECDS 638
+ K Y C +CGK F S+L H H+ ++ S
Sbjct: 3 SGS-SGTGEKPYKCQVCGKAFRVSSHLVQHHSVHS-------GERPSGPSS 45
Score = 27.1 bits (61), Expect = 6.8
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 1373 EHINKHTGNKPYHCQICKESF 1393
+ TG KPY CQ+C ++F
Sbjct: 2 SSGSSGTGEKPYKCQVCGKAF 22
>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 56.8 bits (138), Expect = 2e-10
Identities = 17/37 (45%), Positives = 24/37 (64%)
Query: 1040 HTGERPYKCDVCGSSFKDKWYLGVHMRKHNGEKPYNC 1076
TGE+PYKC+ CG +F+ + L +H H+GEKP
Sbjct: 7 GTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGP 43
Score = 42.9 bits (102), Expect = 1e-05
Identities = 15/35 (42%), Positives = 18/35 (51%)
Query: 1062 GVHMRKHNGEKPYNCDYCGQTFAARSTFTFHLKKH 1096
G GEKPY C+ CG+ F ARS+ H H
Sbjct: 1 GSSGSSGTGEKPYKCNECGKAFRARSSLAIHQATH 35
Score = 41.0 bits (97), Expect = 8e-05
Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Query: 1965 RHMLSHTGEKPFCCDICGK--SLKGNLKAHILRCQGERPYKC 2004
S TGEKP+ C+ CGK + +L H GE+P
Sbjct: 2 SSGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGP 43
Score = 39.1 bits (92), Expect = 3e-04
Identities = 13/38 (34%), Positives = 22/38 (57%)
Query: 895 IKTIERKFECDYCKMKFKSKSFLSEHINTHTGNKPYQC 932
T E+ ++C+ C F+++S L+ H TH+G KP
Sbjct: 6 SGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGP 43
Score = 37.1 bits (87), Expect = 0.002
Identities = 11/31 (35%), Positives = 15/31 (48%)
Query: 1511 FECDFCKKKFYRNFDLQEHINTHTGNKPYQC 1541
++C+ C K F L H TH+G KP
Sbjct: 13 YKCNECGKAFRARSSLAIHQATHSGEKPSGP 43
Score = 36.0 bits (84), Expect = 0.004
Identities = 12/35 (34%), Positives = 17/35 (48%), Gaps = 4/35 (11%)
Query: 1529 HINTHTGNKPYQCQICNKSFGTRRNYRLHLKRHKR 1563
++ TG KPY+C C K+F R L H+
Sbjct: 3 SGSSGTGEKPYKCNECGKAF----RARSSLAIHQA 33
Score = 36.0 bits (84), Expect = 0.005
Identities = 13/30 (43%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Query: 1998 GERPYKCDVCGSSFKDKKHFSVHIRNH-GE 2026
GE+PYKC+ CG +F+ + ++H H GE
Sbjct: 9 GEKPYKCNECGKAFRARSSLAIHQATHSGE 38
Score = 34.8 bits (81), Expect = 0.012
Identities = 11/33 (33%), Positives = 18/33 (54%)
Query: 632 KKYECDSCNKKFWSKRALSEHMIIHTGIKEHQC 664
K Y+C+ C K F ++ +L+ H H+G K
Sbjct: 11 KPYKCNECGKAFRARSSLAIHQATHSGEKPSGP 43
Score = 33.7 bits (78), Expect = 0.029
Identities = 13/36 (36%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Query: 1352 TGNK-FECIYCKKKYRRKFDLKEHINKHTGNKPYHC 1386
TG K ++C C K +R + L H H+G KP
Sbjct: 8 TGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGP 43
Score = 32.1 bits (74), Expect = 0.099
Identities = 9/23 (39%), Positives = 14/23 (60%)
Query: 920 HINTHTGNKPYQCQICKKSFANK 942
++ TG KPY+C C K+F +
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRAR 25
Score = 31.7 bits (73), Expect = 0.15
Identities = 13/45 (28%), Positives = 17/45 (37%), Gaps = 6/45 (13%)
Query: 652 HMIIHTGIKEHQCHVCNTAFYHIRSLSRHLKIH--EYNESKMYKC 694
TG K ++C+ C AF SL+ H H E K
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGE----KPSGP 43
Score = 30.2 bits (69), Expect = 0.52
Identities = 12/35 (34%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Query: 989 GDKCHICKVCGA--KIKGNLQKHMLSHTGEKPFCC 1021
G+K + C CG + + +L H +H+GEKP
Sbjct: 9 GEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGP 43
Score = 27.9 bits (63), Expect = 3.8
Identities = 9/30 (30%), Positives = 14/30 (46%)
Query: 430 ECDYCKRKFTCKRYLAEHINAHTGNTIYGC 459
+C+ C + F + LA H H+G G
Sbjct: 14 KCNECGKAFRARSSLAIHQATHSGEKPSGP 43
Score = 27.9 bits (63), Expect = 3.9
Identities = 11/30 (36%), Positives = 16/30 (53%)
Query: 592 VHSSIKRYMCDICGKQFTTLSYLDLHRKSH 621
+ K Y C+ CGK F S L +H+ +H
Sbjct: 6 SGTGEKPYKCNECGKAFRARSSLAIHQATH 35
Score = 27.5 bits (62), Expect = 4.2
Identities = 11/35 (31%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Query: 1946 GDKCHVCKVCGA--KIKGNMKRHMLSHTGEKPFCC 1978
G+K + C CG + + ++ H +H+GEKP
Sbjct: 9 GEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGP 43
>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 46
Score = 56.8 bits (138), Expect = 2e-10
Identities = 15/37 (40%), Positives = 19/37 (51%)
Query: 1040 HTGERPYKCDVCGSSFKDKWYLGVHMRKHNGEKPYNC 1076
TGE+P KC CG +F K L +H R H +K
Sbjct: 7 GTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGP 43
Score = 49.9 bits (120), Expect = 5e-08
Identities = 14/42 (33%), Positives = 17/42 (40%), Gaps = 3/42 (7%)
Query: 1009 HMLSHTGEKPFCCHICGK--SLKGNLKDHILKCHTGERPYKC 1048
S TGEKP C CGK K L H + H ++
Sbjct: 3 SGSSGTGEKPCKCTECGKAFCWKSQLIMH-QRTHVDDKHSGP 43
Score = 42.2 bits (100), Expect = 3e-05
Identities = 13/42 (30%), Positives = 15/42 (35%), Gaps = 2/42 (4%)
Query: 1965 RHMLSHTGEKPFCCDICGK--SLKGNLKAHILRCQGERPYKC 2004
S TGEKP C CGK K L H ++
Sbjct: 2 SSGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGP 43
Score = 41.4 bits (98), Expect = 5e-05
Identities = 12/35 (34%), Positives = 15/35 (42%)
Query: 1062 GVHMRKHNGEKPYNCDYCGQTFAARSTFTFHLKKH 1096
G GEKP C CG+ F +S H + H
Sbjct: 1 GSSGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTH 35
Score = 37.9 bits (89), Expect = 8e-04
Identities = 12/36 (33%), Positives = 15/36 (41%)
Query: 897 TIERKFECDYCKMKFKSKSFLSEHINTHTGNKPYQC 932
T E+ +C C F KS L H TH +K
Sbjct: 8 TGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGP 43
Score = 37.5 bits (88), Expect = 0.001
Identities = 11/35 (31%), Positives = 18/35 (51%), Gaps = 4/35 (11%)
Query: 1529 HINTHTGNKPYQCQICNKSFGTRRNYRLHLKRHKR 1563
++ TG KP +C C K+F ++ L H+R
Sbjct: 3 SGSSGTGEKPCKCTECGKAF----CWKSQLIMHQR 33
Score = 36.8 bits (86), Expect = 0.002
Identities = 9/31 (29%), Positives = 11/31 (35%)
Query: 1511 FECDFCKKKFYRNFDLQEHINTHTGNKPYQC 1541
+C C K F L H TH +K
Sbjct: 13 CKCTECGKAFCWKSQLIMHQRTHVDDKHSGP 43
Score = 36.8 bits (86), Expect = 0.002
Identities = 12/30 (40%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Query: 1998 GERPYKCDVCGSSFKDKKHFSVHIRNH-GE 2026
GE+P KC CG +F K +H R H +
Sbjct: 9 GEKPCKCTECGKAFCWKSQLIMHQRTHVDD 38
Score = 34.5 bits (80), Expect = 0.016
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 920 HINTHTGNKPYQCQICKKSFANK 942
++ TG KP +C C K+F K
Sbjct: 3 SGSSGTGEKPCKCTECGKAFCWK 25
Score = 34.1 bits (79), Expect = 0.023
Identities = 11/36 (30%), Positives = 14/36 (38%), Gaps = 1/36 (2%)
Query: 1352 TGNK-FECIYCKKKYRRKFDLKEHINKHTGNKPYHC 1386
TG K +C C K + K L H H +K
Sbjct: 8 TGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGP 43
Score = 33.3 bits (77), Expect = 0.036
Identities = 10/33 (30%), Positives = 11/33 (33%)
Query: 632 KKYECDSCNKKFWSKRALSEHMIIHTGIKEHQC 664
K +C C K F K L H H K
Sbjct: 11 KPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGP 43
Score = 31.0 bits (71), Expect = 0.22
Identities = 10/35 (28%), Positives = 13/35 (37%), Gaps = 2/35 (5%)
Query: 989 GDKCHICKVCGA--KIKGNLQKHMLSHTGEKPFCC 1021
G+K C CG K L H +H +K
Sbjct: 9 GEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGP 43
Score = 30.2 bits (69), Expect = 0.49
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 593 HSSIKRYMCDICGKQFTTLSYLDLHRKSH 621
+ K C CGK F S L +H+++H
Sbjct: 7 GTGEKPCKCTECGKAFCWKSQLIMHQRTH 35
Score = 29.8 bits (68), Expect = 0.73
Identities = 10/33 (30%), Positives = 12/33 (36%)
Query: 652 HMIIHTGIKEHQCHVCNTAFYHIRSLSRHLKIH 684
TG K +C C AF L H + H
Sbjct: 3 SGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTH 35
Score = 29.1 bits (66), Expect = 1.2
Identities = 9/35 (25%), Positives = 13/35 (37%), Gaps = 2/35 (5%)
Query: 1946 GDKCHVCKVCGA--KIKGNMKRHMLSHTGEKPFCC 1978
G+K C CG K + H +H +K
Sbjct: 9 GEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGP 43
Score = 27.1 bits (61), Expect = 5.8
Identities = 9/33 (27%), Positives = 14/33 (42%), Gaps = 4/33 (12%)
Query: 1374 HINKHTGNKPYHCQICKESFYTLKTYRGDLKRH 1406
+ TG KP C C ++F ++ L H
Sbjct: 3 SGSSGTGEKPCKCTECGKAF----CWKSQLIMH 31
Score = 26.8 bits (60), Expect = 7.9
Identities = 8/30 (26%), Positives = 11/30 (36%)
Query: 430 ECDYCKRKFTCKRYLAEHINAHTGNTIYGC 459
+C C + F K L H H + G
Sbjct: 14 KCTECGKAFCWKSQLIMHQRTHVDDKHSGP 43
>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 45
Score = 56.8 bits (138), Expect = 2e-10
Identities = 16/37 (43%), Positives = 21/37 (56%)
Query: 1040 HTGERPYKCDVCGSSFKDKWYLGVHMRKHNGEKPYNC 1076
TG++P++C CG SF+ K L H R H GEK
Sbjct: 7 GTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPS 43
Score = 49.1 bits (118), Expect = 8e-08
Identities = 19/42 (45%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
Query: 1009 HMLSHTGEKPFCCHICGK--SLKGNLKDHILKCHTGERPYKC 1048
S TG+KPF C CGK KGNL H + HTGE+
Sbjct: 3 SGSSGTGQKPFECTHCGKSFRAKGNLVTH-QRIHTGEKSGPS 43
Score = 42.5 bits (101), Expect = 2e-05
Identities = 17/41 (41%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 1966 HMLSHTGEKPFCCDICGK--SLKGNLKAHILRCQGERPYKC 2004
S TG+KPF C CGK KGNL H GE+
Sbjct: 3 SGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPS 43
Score = 42.5 bits (101), Expect = 2e-05
Identities = 11/35 (31%), Positives = 18/35 (51%)
Query: 1062 GVHMRKHNGEKPYNCDYCGQTFAARSTFTFHLKKH 1096
G G+KP+ C +CG++F A+ H + H
Sbjct: 1 GSSGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIH 35
Score = 39.8 bits (94), Expect = 2e-04
Identities = 13/38 (34%), Positives = 18/38 (47%)
Query: 895 IKTIERKFECDYCKMKFKSKSFLSEHINTHTGNKPYQC 932
T ++ FEC +C F++K L H HTG K
Sbjct: 6 SGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPS 43
Score = 37.9 bits (89), Expect = 9e-04
Identities = 14/38 (36%), Positives = 16/38 (42%)
Query: 1504 IKTIQRKFECDFCKKKFYRNFDLQEHINTHTGNKPYQC 1541
T Q+ FEC C K F +L H HTG K
Sbjct: 6 SGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPS 43
Score = 36.8 bits (86), Expect = 0.003
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Query: 1352 TGNK-FECIYCKKKYRRKFDLKEHINKHTGNKPYHC 1386
TG K FEC +C K +R K +L H HTG K
Sbjct: 8 TGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPS 43
Score = 36.4 bits (85), Expect = 0.003
Identities = 12/35 (34%), Positives = 19/35 (54%), Gaps = 4/35 (11%)
Query: 1529 HINTHTGNKPYQCQICNKSFGTRRNYRLHLKRHKR 1563
++ TG KP++C C KSF + +L H+R
Sbjct: 3 SGSSGTGQKPFECTHCGKSF----RAKGNLVTHQR 33
Score = 36.0 bits (84), Expect = 0.005
Identities = 13/30 (43%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Query: 1998 GERPYKCDVCGSSFKDKKHFSVHIRNH-GE 2026
G++P++C CG SF+ K + H R H GE
Sbjct: 9 GQKPFECTHCGKSFRAKGNLVTHQRIHTGE 38
Score = 35.6 bits (83), Expect = 0.007
Identities = 14/33 (42%), Positives = 16/33 (48%)
Query: 632 KKYECDSCNKKFWSKRALSEHMIIHTGIKEHQC 664
K +EC C K F +K L H IHTG K
Sbjct: 11 KPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPS 43
Score = 33.3 bits (77), Expect = 0.039
Identities = 10/23 (43%), Positives = 14/23 (60%)
Query: 920 HINTHTGNKPYQCQICKKSFANK 942
++ TG KP++C C KSF K
Sbjct: 3 SGSSGTGQKPFECTHCGKSFRAK 25
Score = 32.1 bits (74), Expect = 0.096
Identities = 12/45 (26%), Positives = 16/45 (35%), Gaps = 6/45 (13%)
Query: 652 HMIIHTGIKEHQCHVCNTAFYHIRSLSRHLKIH--EYNESKMYKC 694
TG K +C C +F +L H +IH E K
Sbjct: 3 SGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGE----KSGPS 43
Score = 31.7 bits (73), Expect = 0.12
Identities = 15/35 (42%), Positives = 16/35 (45%), Gaps = 2/35 (5%)
Query: 989 GDKCHICKVCGA--KIKGNLQKHMLSHTGEKPFCC 1021
G K C CG + KGNL H HTGEK
Sbjct: 9 GQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPS 43
Score = 29.4 bits (67), Expect = 0.81
Identities = 14/35 (40%), Positives = 16/35 (45%), Gaps = 2/35 (5%)
Query: 1946 GDKCHVCKVCGA--KIKGNMKRHMLSHTGEKPFCC 1978
G K C CG + KGN+ H HTGEK
Sbjct: 9 GQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPS 43
Score = 27.5 bits (62), Expect = 5.2
Identities = 11/33 (33%), Positives = 16/33 (48%), Gaps = 4/33 (12%)
Query: 1374 HINKHTGNKPYHCQICKESFYTLKTYRGDLKRH 1406
+ TG KP+ C C +SF +G+L H
Sbjct: 3 SGSSGTGQKPFECTHCGKSF----RAKGNLVTH 31
Score = 27.1 bits (61), Expect = 6.3
Identities = 9/34 (26%), Positives = 13/34 (38%), Gaps = 1/34 (2%)
Query: 588 HLRHVHSSIKRYMCDICGKQFTTLSYLDLHRKSH 621
+ K + C CGK F L H++ H
Sbjct: 3 SGS-SGTGQKPFECTHCGKSFRAKGNLVTHQRIH 35
Score = 26.7 bits (60), Expect = 8.6
Identities = 10/30 (33%), Positives = 12/30 (40%)
Query: 430 ECDYCKRKFTCKRYLAEHINAHTGNTIYGC 459
EC +C + F K L H HTG
Sbjct: 14 ECTHCGKSFRAKGNLVTHQRIHTGEKSGPS 43
>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 56.8 bits (138), Expect = 2e-10
Identities = 19/39 (48%), Positives = 22/39 (56%)
Query: 1038 KCHTGERPYKCDVCGSSFKDKWYLGVHMRKHNGEKPYNC 1076
TGE+PY C+ CG SF K +L H R H GEKP
Sbjct: 5 SSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGP 43
Score = 48.3 bits (116), Expect = 2e-07
Identities = 19/43 (44%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Query: 1008 KHMLSHTGEKPFCCHICGKSL--KGNLKDHILKCHTGERPYKC 1048
S TGEKP+ C+ CGKS K +L H + HTGE+P
Sbjct: 2 SSGSSGTGEKPYICNECGKSFIQKSHLNRH-RRIHTGEKPSGP 43
Score = 40.2 bits (95), Expect = 1e-04
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 6/43 (13%)
Query: 1966 HMLSHTGEKPFCCDICGKSLKGNLKAHILRCQ----GERPYKC 2004
S TGEKP+ C+ CGKS K+H+ R + GE+P
Sbjct: 3 SGSSGTGEKPYICNECGKSF--IQKSHLNRHRRIHTGEKPSGP 43
Score = 39.8 bits (94), Expect = 2e-04
Identities = 13/35 (37%), Positives = 18/35 (51%)
Query: 1062 GVHMRKHNGEKPYNCDYCGQTFAARSTFTFHLKKH 1096
G GEKPY C+ CG++F +S H + H
Sbjct: 1 GSSGSSGTGEKPYICNECGKSFIQKSHLNRHRRIH 35
Score = 38.3 bits (90), Expect = 7e-04
Identities = 14/38 (36%), Positives = 18/38 (47%)
Query: 895 IKTIERKFECDYCKMKFKSKSFLSEHINTHTGNKPYQC 932
T E+ + C+ C F KS L+ H HTG KP
Sbjct: 6 SGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGP 43
Score = 37.9 bits (89), Expect = 0.001
Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 4/35 (11%)
Query: 1529 HINTHTGNKPYQCQICNKSFGTRRNYRLHLKRHKR 1563
++ TG KPY C C KSF + HL RH+R
Sbjct: 3 SGSSGTGEKPYICNECGKSF----IQKSHLNRHRR 33
Score = 37.9 bits (89), Expect = 0.001
Identities = 11/31 (35%), Positives = 14/31 (45%)
Query: 1511 FECDFCKKKFYRNFDLQEHINTHTGNKPYQC 1541
+ C+ C K F + L H HTG KP
Sbjct: 13 YICNECGKSFIQKSHLNRHRRIHTGEKPSGP 43
Score = 36.3 bits (85), Expect = 0.003
Identities = 16/30 (53%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Query: 1998 GERPYKCDVCGSSFKDKKHFSVHIRNH-GE 2026
GE+PY C+ CG SF K H + H R H GE
Sbjct: 9 GEKPYICNECGKSFIQKSHLNRHRRIHTGE 38
Score = 34.4 bits (80), Expect = 0.015
Identities = 14/33 (42%), Positives = 16/33 (48%)
Query: 632 KKYECDSCNKKFWSKRALSEHMIIHTGIKEHQC 664
K Y C+ C K F K L+ H IHTG K
Sbjct: 11 KPYICNECGKSFIQKSHLNRHRRIHTGEKPSGP 43
Score = 34.0 bits (79), Expect = 0.021
Identities = 14/36 (38%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Query: 1352 TGNK-FECIYCKKKYRRKFDLKEHINKHTGNKPYHC 1386
TG K + C C K + +K L H HTG KP
Sbjct: 8 TGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGP 43
Score = 32.5 bits (75), Expect = 0.084
Identities = 11/23 (47%), Positives = 13/23 (56%)
Query: 920 HINTHTGNKPYQCQICKKSFANK 942
++ TG KPY C C KSF K
Sbjct: 3 SGSSGTGEKPYICNECGKSFIQK 25
Score = 31.7 bits (73), Expect = 0.16
Identities = 13/45 (28%), Positives = 18/45 (40%), Gaps = 6/45 (13%)
Query: 652 HMIIHTGIKEHQCHVCNTAFYHIRSLSRHLKIH--EYNESKMYKC 694
TG K + C+ C +F L+RH +IH E K
Sbjct: 3 SGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGE----KPSGP 43
Score = 30.2 bits (69), Expect = 0.55
Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Query: 989 GDKCHICKVCGAKI--KGNLQKHMLSHTGEKPFCC 1021
G+K +IC CG K +L +H HTGEKP
Sbjct: 9 GEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGP 43
Score = 28.2 bits (64), Expect = 2.3
Identities = 12/30 (40%), Positives = 18/30 (60%)
Query: 592 VHSSIKRYMCDICGKQFTTLSYLDLHRKSH 621
+ K Y+C+ CGK F S+L+ HR+ H
Sbjct: 6 SGTGEKPYICNECGKSFIQKSHLNRHRRIH 35
Score = 27.9 bits (63), Expect = 3.4
Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Query: 1946 GDKCHVCKVCGAKI--KGNMKRHMLSHTGEKPFCC 1978
G+K ++C CG K ++ RH HTGEKP
Sbjct: 9 GEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGP 43
Score = 27.1 bits (61), Expect = 5.7
Identities = 11/38 (28%), Positives = 16/38 (42%), Gaps = 6/38 (15%)
Query: 381 AKHMRVHLRSVHNGKERKFICDICGKQFTSNIHASRHK 418
G E+ +IC+ CGK F H +RH+
Sbjct: 1 GSSGSSG-----TG-EKPYICNECGKSFIQKSHLNRHR 32
>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 56.4 bits (137), Expect = 2e-10
Identities = 13/38 (34%), Positives = 18/38 (47%)
Query: 1040 HTGERPYKCDVCGSSFKDKWYLGVHMRKHNGEKPYNCD 1077
TGE+P++C CG +F L H+R H P
Sbjct: 7 GTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGPS 44
Score = 49.5 bits (119), Expect = 8e-08
Identities = 16/43 (37%), Positives = 18/43 (41%), Gaps = 3/43 (6%)
Query: 1009 HMLSHTGEKPFCCHICGK--SLKGNLKDHILKCHTGERPYKCD 1049
S TGEKPF C CG S +L H L+ H P
Sbjct: 3 SGSSGTGEKPFQCKECGMNFSWSCSLFKH-LRSHERTDPSGPS 44
Score = 44.9 bits (107), Expect = 3e-06
Identities = 12/35 (34%), Positives = 16/35 (45%)
Query: 1062 GVHMRKHNGEKPYNCDYCGQTFAARSTFTFHLKKH 1096
G GEKP+ C CG F+ + HL+ H
Sbjct: 1 GSSGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSH 35
Score = 42.2 bits (100), Expect = 3e-05
Identities = 12/35 (34%), Positives = 20/35 (57%)
Query: 1529 HINTHTGNKPYQCQICNKSFGTRRNYRLHLKRHKR 1563
++ TG KP+QC+ C +F + HL+ H+R
Sbjct: 3 SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHER 37
Score = 42.2 bits (100), Expect = 3e-05
Identities = 14/42 (33%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Query: 1966 HMLSHTGEKPFCCDICGK--SLKGNLKAHILRCQGERPYKCD 2005
S TGEKPF C CG S +L H+ + P
Sbjct: 3 SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGPS 44
Score = 38.3 bits (90), Expect = 7e-04
Identities = 11/34 (32%), Positives = 18/34 (52%), Gaps = 4/34 (11%)
Query: 920 HINTHTGNKPYQCQICKKSFANKRSYQRDLKRHK 953
++ TG KP+QC+ C +F S+ L +H
Sbjct: 3 SGSSGTGEKPFQCKECGMNF----SWSCSLFKHL 32
Score = 38.3 bits (90), Expect = 7e-04
Identities = 11/36 (30%), Positives = 16/36 (44%)
Query: 897 TIERKFECDYCKMKFKSKSFLSEHINTHTGNKPYQC 932
T E+ F+C C M F L +H+ +H P
Sbjct: 8 TGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGP 43
Score = 36.4 bits (85), Expect = 0.003
Identities = 8/31 (25%), Positives = 13/31 (41%)
Query: 1511 FECDFCKKKFYRNFDLQEHINTHTGNKPYQC 1541
F+C C F + L +H+ +H P
Sbjct: 13 FQCKECGMNFSWSCSLFKHLRSHERTDPSGP 43
Score = 36.0 bits (84), Expect = 0.005
Identities = 10/31 (32%), Positives = 16/31 (51%)
Query: 1998 GERPYKCDVCGSSFKDKKHFSVHIRNHGEDK 2028
GE+P++C CG +F H+R+H
Sbjct: 9 GEKPFQCKECGMNFSWSCSLFKHLRSHERTD 39
Score = 34.1 bits (79), Expect = 0.021
Identities = 12/35 (34%), Positives = 15/35 (42%), Gaps = 2/35 (5%)
Query: 989 GDKCHICKVCGA--KIKGNLQKHMLSHTGEKPFCC 1021
G+K CK CG +L KH+ SH P
Sbjct: 9 GEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGP 43
Score = 33.7 bits (78), Expect = 0.032
Identities = 10/36 (27%), Positives = 14/36 (38%), Gaps = 1/36 (2%)
Query: 1352 TGNK-FECIYCKKKYRRKFDLKEHINKHTGNKPYHC 1386
TG K F+C C + L +H+ H P
Sbjct: 8 TGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGP 43
Score = 32.9 bits (76), Expect = 0.051
Identities = 12/33 (36%), Positives = 14/33 (42%)
Query: 652 HMIIHTGIKEHQCHVCNTAFYHIRSLSRHLKIH 684
TG K QC C F SL +HL+ H
Sbjct: 3 SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSH 35
Score = 32.2 bits (74), Expect = 0.093
Identities = 10/36 (27%), Positives = 15/36 (41%), Gaps = 2/36 (5%)
Query: 1946 GDKCHVCKVCGA--KIKGNMKRHMLSHTGEKPFCCD 1979
G+K CK CG ++ +H+ SH P
Sbjct: 9 GEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGPS 44
Score = 32.2 bits (74), Expect = 0.10
Identities = 7/33 (21%), Positives = 12/33 (36%)
Query: 632 KKYECDSCNKKFWSKRALSEHMIIHTGIKEHQC 664
K ++C C F +L +H+ H
Sbjct: 11 KPFQCKECGMNFSWSCSLFKHLRSHERTDPSGP 43
Score = 31.4 bits (72), Expect = 0.22
Identities = 9/34 (26%), Positives = 16/34 (47%), Gaps = 4/34 (11%)
Query: 1374 HINKHTGNKPYHCQICKESFYTLKTYRGDLKRHE 1407
+ TG KP+ C+ C +F ++ L +H
Sbjct: 3 SGSSGTGEKPFQCKECGMNF----SWSCSLFKHL 32
Score = 29.5 bits (67), Expect = 0.85
Identities = 9/29 (31%), Positives = 13/29 (44%)
Query: 593 HSSIKRYMCDICGKQFTTLSYLDLHRKSH 621
+ K + C CG F+ L H +SH
Sbjct: 7 GTGEKPFQCKECGMNFSWSCSLFKHLRSH 35
Score = 28.3 bits (64), Expect = 2.3
Identities = 7/29 (24%), Positives = 14/29 (48%)
Query: 447 HINAHTGNTIYGCRICKKTFLYTNGLRRH 475
++ TG + C+ C F ++ L +H
Sbjct: 3 SGSSGTGEKPFQCKECGMNFSWSCSLFKH 31
>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding,
metal-binding, nuclear protein, repeat, transcription,
transcription regulation; NMR {Homo sapiens} SCOP:
k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A
Length = 46
Score = 56.4 bits (137), Expect = 2e-10
Identities = 16/37 (43%), Positives = 18/37 (48%)
Query: 1040 HTGERPYKCDVCGSSFKDKWYLGVHMRKHNGEKPYNC 1076
TG +PY C C +F K L VH R H G KP
Sbjct: 7 GTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGP 43
Score = 49.5 bits (119), Expect = 7e-08
Identities = 17/43 (39%), Positives = 20/43 (46%), Gaps = 3/43 (6%)
Query: 1008 KHMLSHTGEKPFCCHICGK--SLKGNLKDHILKCHTGERPYKC 1048
S TG KP+ C C K SLK L H + HTG +P
Sbjct: 2 SSGSSGTGVKPYGCSQCAKTFSLKSQLIVH-QRSHTGVKPSGP 43
Score = 42.9 bits (102), Expect = 2e-05
Identities = 15/42 (35%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Query: 1965 RHMLSHTGEKPFCCDICGK--SLKGNLKAHILRCQGERPYKC 2004
S TG KP+ C C K SLK L H G +P
Sbjct: 2 SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGP 43
Score = 42.1 bits (100), Expect = 3e-05
Identities = 12/35 (34%), Positives = 16/35 (45%)
Query: 1062 GVHMRKHNGEKPYNCDYCGQTFAARSTFTFHLKKH 1096
G G KPY C C +TF+ +S H + H
Sbjct: 1 GSSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSH 35
Score = 38.7 bits (91), Expect = 4e-04
Identities = 13/38 (34%), Positives = 16/38 (42%)
Query: 895 IKTIERKFECDYCKMKFKSKSFLSEHINTHTGNKPYQC 932
T + + C C F KS L H +HTG KP
Sbjct: 6 SGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGP 43
Score = 37.9 bits (89), Expect = 8e-04
Identities = 11/31 (35%), Positives = 13/31 (41%)
Query: 1511 FECDFCKKKFYRNFDLQEHINTHTGNKPYQC 1541
+ C C K F L H +HTG KP
Sbjct: 13 YGCSQCAKTFSLKSQLIVHQRSHTGVKPSGP 43
Score = 36.4 bits (85), Expect = 0.004
Identities = 11/33 (33%), Positives = 17/33 (51%)
Query: 1529 HINTHTGNKPYQCQICNKSFGTRRNYRLHLKRH 1561
++ TG KPY C C K+F + +H + H
Sbjct: 3 SGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSH 35
Score = 35.6 bits (83), Expect = 0.006
Identities = 12/30 (40%), Positives = 15/30 (50%), Gaps = 1/30 (3%)
Query: 1998 GERPYKCDVCGSSFKDKKHFSVHIRNH-GE 2026
G +PY C C +F K VH R+H G
Sbjct: 9 GVKPYGCSQCAKTFSLKSQLIVHQRSHTGV 38
Score = 34.0 bits (79), Expect = 0.022
Identities = 14/36 (38%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
Query: 1352 TGNK-FECIYCKKKYRRKFDLKEHINKHTGNKPYHC 1386
TG K + C C K + K L H HTG KP
Sbjct: 8 TGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGP 43
Score = 34.0 bits (79), Expect = 0.024
Identities = 10/23 (43%), Positives = 14/23 (60%)
Query: 920 HINTHTGNKPYQCQICKKSFANK 942
++ TG KPY C C K+F+ K
Sbjct: 3 SGSSGTGVKPYGCSQCAKTFSLK 25
Score = 33.3 bits (77), Expect = 0.040
Identities = 13/33 (39%), Positives = 14/33 (42%)
Query: 632 KKYECDSCNKKFWSKRALSEHMIIHTGIKEHQC 664
K Y C C K F K L H HTG+K
Sbjct: 11 KPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGP 43
Score = 32.1 bits (74), Expect = 0.094
Identities = 13/35 (37%), Positives = 15/35 (42%), Gaps = 2/35 (5%)
Query: 989 GDKCHICKVCGA--KIKGNLQKHMLSHTGEKPFCC 1021
G K + C C +K L H SHTG KP
Sbjct: 9 GVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGP 43
Score = 31.0 bits (71), Expect = 0.25
Identities = 9/33 (27%), Positives = 12/33 (36%)
Query: 652 HMIIHTGIKEHQCHVCNTAFYHIRSLSRHLKIH 684
TG+K + C C F L H + H
Sbjct: 3 SGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSH 35
Score = 29.4 bits (67), Expect = 1.0
Identities = 12/35 (34%), Positives = 15/35 (42%), Gaps = 2/35 (5%)
Query: 1946 GDKCHVCKVCGA--KIKGNMKRHMLSHTGEKPFCC 1978
G K + C C +K + H SHTG KP
Sbjct: 9 GVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGP 43
Score = 29.0 bits (66), Expect = 1.2
Identities = 11/30 (36%), Positives = 17/30 (56%)
Query: 592 VHSSIKRYMCDICGKQFTTLSYLDLHRKSH 621
+ +K Y C C K F+ S L +H++SH
Sbjct: 6 SGTGVKPYGCSQCAKTFSLKSQLIVHQRSH 35
Score = 27.9 bits (63), Expect = 3.6
Identities = 10/30 (33%), Positives = 13/30 (43%)
Query: 430 ECDYCKRKFTCKRYLAEHINAHTGNTIYGC 459
C C + F+ K L H +HTG G
Sbjct: 14 GCSQCAKTFSLKSQLIVHQRSHTGVKPSGP 43
Score = 26.7 bits (60), Expect = 9.6
Identities = 8/20 (40%), Positives = 11/20 (55%)
Query: 1374 HINKHTGNKPYHCQICKESF 1393
+ TG KPY C C ++F
Sbjct: 3 SGSSGTGVKPYGCSQCAKTF 22
>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 46
Score = 56.4 bits (137), Expect = 2e-10
Identities = 14/39 (35%), Positives = 16/39 (41%)
Query: 1038 KCHTGERPYKCDVCGSSFKDKWYLGVHMRKHNGEKPYNC 1076
GER ++C CG F H R H GEKP
Sbjct: 5 SSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGP 43
Score = 47.5 bits (114), Expect = 4e-07
Identities = 14/43 (32%), Positives = 17/43 (39%), Gaps = 3/43 (6%)
Query: 1008 KHMLSHTGEKPFCCHICGK--SLKGNLKDHILKCHTGERPYKC 1048
S GE+ C CGK N H + HTGE+P
Sbjct: 2 SSGSSGHGERGHRCSDCGKFFLQASNFIQH-RRIHTGEKPSGP 43
Score = 41.0 bits (97), Expect = 7e-05
Identities = 11/35 (31%), Positives = 16/35 (45%)
Query: 1062 GVHMRKHNGEKPYNCDYCGQTFAARSTFTFHLKKH 1096
G +GE+ + C CG+ F S F H + H
Sbjct: 1 GSSGSSGHGERGHRCSDCGKFFLQASNFIQHRRIH 35
Score = 38.7 bits (91), Expect = 5e-04
Identities = 12/42 (28%), Positives = 14/42 (33%), Gaps = 2/42 (4%)
Query: 1965 RHMLSHTGEKPFCCDICGK--SLKGNLKAHILRCQGERPYKC 2004
S GE+ C CGK N H GE+P
Sbjct: 2 SSGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGP 43
Score = 36.7 bits (86), Expect = 0.002
Identities = 13/30 (43%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Query: 1998 GERPYKCDVCGSSFKDKKHFSVHIRNH-GE 2026
GER ++C CG F +F H R H GE
Sbjct: 9 GERGHRCSDCGKFFLQASNFIQHRRIHTGE 38
Score = 36.7 bits (86), Expect = 0.002
Identities = 7/35 (20%), Positives = 15/35 (42%), Gaps = 4/35 (11%)
Query: 1529 HINTHTGNKPYQCQICNKSFGTRRNYRLHLKRHKR 1563
++ G + ++C C K F + +H+R
Sbjct: 3 SGSSGHGERGHRCSDCGKFF----LQASNFIQHRR 33
Score = 35.6 bits (83), Expect = 0.005
Identities = 12/36 (33%), Positives = 13/36 (36%)
Query: 897 TIERKFECDYCKMKFKSKSFLSEHINTHTGNKPYQC 932
ER C C F S +H HTG KP
Sbjct: 8 HGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGP 43
Score = 34.0 bits (79), Expect = 0.020
Identities = 14/43 (32%), Positives = 18/43 (41%), Gaps = 2/43 (4%)
Query: 981 AKHMNWVHGDKCHICKVCGA--KIKGNLQKHMLSHTGEKPFCC 1021
+ HG++ H C CG N +H HTGEKP
Sbjct: 1 GSSGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGP 43
Score = 33.7 bits (78), Expect = 0.025
Identities = 10/31 (32%), Positives = 13/31 (41%)
Query: 1511 FECDFCKKKFYRNFDLQEHINTHTGNKPYQC 1541
C C K F + + +H HTG KP
Sbjct: 13 HRCSDCGKFFLQASNFIQHRRIHTGEKPSGP 43
Score = 33.3 bits (77), Expect = 0.044
Identities = 5/20 (25%), Positives = 10/20 (50%)
Query: 920 HINTHTGNKPYQCQICKKSF 939
++ G + ++C C K F
Sbjct: 3 SGSSGHGERGHRCSDCGKFF 22
Score = 32.9 bits (76), Expect = 0.053
Identities = 11/48 (22%), Positives = 16/48 (33%), Gaps = 7/48 (14%)
Query: 617 HRKSHNETVKRKEEDKKYECDSCNKKFWSKRALSEHMIIHTGIKEHQC 664
S + ++ + C C K F +H IHTG K
Sbjct: 3 SGSSGHG-------ERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGP 43
Score = 32.1 bits (74), Expect = 0.11
Identities = 8/33 (24%), Positives = 13/33 (39%)
Query: 652 HMIIHTGIKEHQCHVCNTAFYHIRSLSRHLKIH 684
G + H+C C F + +H +IH
Sbjct: 3 SGSSGHGERGHRCSDCGKFFLQASNFIQHRRIH 35
Score = 31.7 bits (73), Expect = 0.14
Identities = 10/36 (27%), Positives = 15/36 (41%), Gaps = 1/36 (2%)
Query: 1352 TGNK-FECIYCKKKYRRKFDLKEHINKHTGNKPYHC 1386
G + C C K + + + +H HTG KP
Sbjct: 8 HGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGP 43
Score = 31.0 bits (71), Expect = 0.23
Identities = 14/42 (33%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Query: 1939 RHREWVHGDKCHVCKVCGA--KIKGNMKRHMLSHTGEKPFCC 1978
HG++ H C CG N +H HTGEKP
Sbjct: 2 SSGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGP 43
Score = 30.6 bits (70), Expect = 0.33
Identities = 9/32 (28%), Positives = 12/32 (37%)
Query: 590 RHVHSSIKRYMCDICGKQFTTLSYLDLHRKSH 621
+ + C CGK F S HR+ H
Sbjct: 4 GSSGHGERGHRCSDCGKFFLQASNFIQHRRIH 35
Score = 27.1 bits (61), Expect = 6.7
Identities = 4/20 (20%), Positives = 8/20 (40%)
Query: 1374 HINKHTGNKPYHCQICKESF 1393
+ G + + C C + F
Sbjct: 3 SGSSGHGERGHRCSDCGKFF 22
>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 56.4 bits (137), Expect = 2e-10
Identities = 18/39 (46%), Positives = 21/39 (53%)
Query: 1038 KCHTGERPYKCDVCGSSFKDKWYLGVHMRKHNGEKPYNC 1076
TGER Y+C CG +F K L +H R H GEKP
Sbjct: 5 SSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGP 43
Score = 48.3 bits (116), Expect = 2e-07
Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 3/43 (6%)
Query: 1008 KHMLSHTGEKPFCCHICGK--SLKGNLKDHILKCHTGERPYKC 1048
S TGE+ + C CGK + K L H + HTGE+P
Sbjct: 2 SSGSSGTGERHYECSECGKAFARKSTLIMH-QRIHTGEKPSGP 43
Score = 41.3 bits (98), Expect = 6e-05
Identities = 15/46 (32%), Positives = 19/46 (41%), Gaps = 10/46 (21%)
Query: 1965 RHMLSHTGEKPFCCDICGK--SLKGNLKAHILRCQ----GERPYKC 2004
S TGE+ + C CGK + K L H Q GE+P
Sbjct: 2 SSGSSGTGERHYECSECGKAFARKSTLIMH----QRIHTGEKPSGP 43
Score = 40.9 bits (97), Expect = 7e-05
Identities = 13/35 (37%), Positives = 17/35 (48%)
Query: 1062 GVHMRKHNGEKPYNCDYCGQTFAARSTFTFHLKKH 1096
G GE+ Y C CG+ FA +ST H + H
Sbjct: 1 GSSGSSGTGERHYECSECGKAFARKSTLIMHQRIH 35
Score = 39.0 bits (92), Expect = 3e-04
Identities = 16/38 (42%), Positives = 17/38 (44%)
Query: 895 IKTIERKFECDYCKMKFKSKSFLSEHINTHTGNKPYQC 932
T ER +EC C F KS L H HTG KP
Sbjct: 6 SGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGP 43
Score = 37.5 bits (88), Expect = 0.001
Identities = 13/31 (41%), Positives = 14/31 (45%)
Query: 1511 FECDFCKKKFYRNFDLQEHINTHTGNKPYQC 1541
+EC C K F R L H HTG KP
Sbjct: 13 YECSECGKAFARKSTLIMHQRIHTGEKPSGP 43
Score = 35.9 bits (84), Expect = 0.004
Identities = 10/36 (27%), Positives = 17/36 (47%), Gaps = 4/36 (11%)
Query: 1528 EHINTHTGNKPYQCQICNKSFGTRRNYRLHLKRHKR 1563
++ TG + Y+C C K+F + L H+R
Sbjct: 2 SSGSSGTGERHYECSECGKAF----ARKSTLIMHQR 33
Score = 35.6 bits (83), Expect = 0.006
Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Query: 1998 GERPYKCDVCGSSFKDKKHFSVHIRNH-GE 2026
GER Y+C CG +F K +H R H GE
Sbjct: 9 GERHYECSECGKAFARKSTLIMHQRIHTGE 38
Score = 34.4 bits (80), Expect = 0.014
Identities = 14/33 (42%), Positives = 15/33 (45%)
Query: 632 KKYECDSCNKKFWSKRALSEHMIIHTGIKEHQC 664
+ YEC C K F K L H IHTG K
Sbjct: 11 RHYECSECGKAFARKSTLIMHQRIHTGEKPSGP 43
Score = 34.4 bits (80), Expect = 0.015
Identities = 9/24 (37%), Positives = 14/24 (58%)
Query: 919 EHINTHTGNKPYQCQICKKSFANK 942
++ TG + Y+C C K+FA K
Sbjct: 2 SSGSSGTGERHYECSECGKAFARK 25
Score = 34.4 bits (80), Expect = 0.017
Identities = 15/36 (41%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Query: 1352 TGNK-FECIYCKKKYRRKFDLKEHINKHTGNKPYHC 1386
TG + +EC C K + RK L H HTG KP
Sbjct: 8 TGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGP 43
Score = 33.2 bits (77), Expect = 0.043
Identities = 10/34 (29%), Positives = 15/34 (44%)
Query: 651 EHMIIHTGIKEHQCHVCNTAFYHIRSLSRHLKIH 684
TG + ++C C AF +L H +IH
Sbjct: 2 SSGSSGTGERHYECSECGKAFARKSTLIMHQRIH 35
Score = 29.4 bits (67), Expect = 1.1
Identities = 10/34 (29%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
Query: 588 HLRHVHSSIKRYMCDICGKQFTTLSYLDLHRKSH 621
+ + Y C CGK F S L +H++ H
Sbjct: 3 SGS-SGTGERHYECSECGKAFARKSTLIMHQRIH 35
Score = 29.0 bits (66), Expect = 1.3
Identities = 13/35 (37%), Positives = 16/35 (45%), Gaps = 2/35 (5%)
Query: 989 GDKCHICKVCGA--KIKGNLQKHMLSHTGEKPFCC 1021
G++ + C CG K L H HTGEKP
Sbjct: 9 GERHYECSECGKAFARKSTLIMHQRIHTGEKPSGP 43
Score = 27.1 bits (61), Expect = 6.3
Identities = 6/21 (28%), Positives = 10/21 (47%)
Query: 1373 EHINKHTGNKPYHCQICKESF 1393
+ TG + Y C C ++F
Sbjct: 2 SSGSSGTGERHYECSECGKAF 22
Score = 27.1 bits (61), Expect = 7.5
Identities = 12/35 (34%), Positives = 16/35 (45%), Gaps = 2/35 (5%)
Query: 1946 GDKCHVCKVCGA--KIKGNMKRHMLSHTGEKPFCC 1978
G++ + C CG K + H HTGEKP
Sbjct: 9 GERHYECSECGKAFARKSTLIMHQRIHTGEKPSGP 43
>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 56.4 bits (137), Expect = 2e-10
Identities = 15/37 (40%), Positives = 18/37 (48%)
Query: 1040 HTGERPYKCDVCGSSFKDKWYLGVHMRKHNGEKPYNC 1076
GE+PY+C CG SF + L H H EKP
Sbjct: 7 GEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGP 43
Score = 47.5 bits (114), Expect = 3e-07
Identities = 16/43 (37%), Positives = 18/43 (41%), Gaps = 3/43 (6%)
Query: 1008 KHMLSHTGEKPFCCHICGK--SLKGNLKDHILKCHTGERPYKC 1048
S GEKP+ C CGK S L H HT E+P
Sbjct: 2 SSGSSGEGEKPYQCSECGKSFSGSYRLTQH-WITHTREKPSGP 43
Score = 41.4 bits (98), Expect = 6e-05
Identities = 13/35 (37%), Positives = 16/35 (45%)
Query: 1062 GVHMRKHNGEKPYNCDYCGQTFAARSTFTFHLKKH 1096
G GEKPY C CG++F+ T H H
Sbjct: 1 GSSGSSGEGEKPYQCSECGKSFSGSYRLTQHWITH 35
Score = 40.6 bits (96), Expect = 1e-04
Identities = 14/41 (34%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 1966 HMLSHTGEKPFCCDICGK--SLKGNLKAHILRCQGERPYKC 2004
S GEKP+ C CGK S L H + E+P
Sbjct: 3 SGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGP 43
Score = 39.4 bits (93), Expect = 2e-04
Identities = 12/35 (34%), Positives = 16/35 (45%), Gaps = 4/35 (11%)
Query: 1529 HINTHTGNKPYQCQICNKSFGTRRNYRLHLKRHKR 1563
++ G KPYQC C KSF + L +H
Sbjct: 3 SGSSGEGEKPYQCSECGKSF----SGSYRLTQHWI 33
Score = 38.3 bits (90), Expect = 7e-04
Identities = 11/36 (30%), Positives = 16/36 (44%)
Query: 897 TIERKFECDYCKMKFKSKSFLSEHINTHTGNKPYQC 932
E+ ++C C F L++H THT KP
Sbjct: 8 EGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGP 43
Score = 37.9 bits (89), Expect = 0.001
Identities = 11/31 (35%), Positives = 16/31 (51%)
Query: 1511 FECDFCKKKFYRNFDLQEHINTHTGNKPYQC 1541
++C C K F ++ L +H THT KP
Sbjct: 13 YQCSECGKSFSGSYRLTQHWITHTREKPSGP 43
Score = 37.1 bits (87), Expect = 0.002
Identities = 12/30 (40%), Positives = 15/30 (50%), Gaps = 1/30 (3%)
Query: 1998 GERPYKCDVCGSSFKDKKHFSVHIRNH-GE 2026
GE+PY+C CG SF + H H E
Sbjct: 9 GEKPYQCSECGKSFSGSYRLTQHWITHTRE 38
Score = 35.2 bits (82), Expect = 0.008
Identities = 12/33 (36%), Positives = 15/33 (45%)
Query: 632 KKYECDSCNKKFWSKRALSEHMIIHTGIKEHQC 664
K Y+C C K F L++H I HT K
Sbjct: 11 KPYQCSECGKSFSGSYRLTQHWITHTREKPSGP 43
Score = 34.8 bits (81), Expect = 0.012
Identities = 10/23 (43%), Positives = 13/23 (56%)
Query: 920 HINTHTGNKPYQCQICKKSFANK 942
++ G KPYQC C KSF+
Sbjct: 3 SGSSGEGEKPYQCSECGKSFSGS 25
Score = 34.4 bits (80), Expect = 0.015
Identities = 11/36 (30%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
Query: 1352 TGNK-FECIYCKKKYRRKFDLKEHINKHTGNKPYHC 1386
G K ++C C K + + L +H HT KP
Sbjct: 8 EGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGP 43
Score = 32.1 bits (74), Expect = 0.099
Identities = 9/33 (27%), Positives = 13/33 (39%)
Query: 652 HMIIHTGIKEHQCHVCNTAFYHIRSLSRHLKIH 684
G K +QC C +F L++H H
Sbjct: 3 SGSSGEGEKPYQCSECGKSFSGSYRLTQHWITH 35
Score = 31.0 bits (71), Expect = 0.24
Identities = 12/35 (34%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
Query: 989 GDKCHICKVCGA--KIKGNLQKHMLSHTGEKPFCC 1021
G+K + C CG L +H ++HT EKP
Sbjct: 9 GEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGP 43
Score = 29.4 bits (67), Expect = 0.80
Identities = 10/30 (33%), Positives = 12/30 (40%)
Query: 592 VHSSIKRYMCDICGKQFTTLSYLDLHRKSH 621
K Y C CGK F+ L H +H
Sbjct: 6 SGEGEKPYQCSECGKSFSGSYRLTQHWITH 35
Score = 28.7 bits (65), Expect = 1.7
Identities = 11/35 (31%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
Query: 1946 GDKCHVCKVCGA--KIKGNMKRHMLSHTGEKPFCC 1978
G+K + C CG + +H ++HT EKP
Sbjct: 9 GEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGP 43
Score = 27.9 bits (63), Expect = 3.4
Identities = 8/20 (40%), Positives = 10/20 (50%)
Query: 1374 HINKHTGNKPYHCQICKESF 1393
+ G KPY C C +SF
Sbjct: 3 SGSSGEGEKPYQCSECGKSF 22
Score = 27.5 bits (62), Expect = 5.1
Identities = 8/30 (26%), Positives = 12/30 (40%)
Query: 430 ECDYCKRKFTCKRYLAEHINAHTGNTIYGC 459
+C C + F+ L +H HT G
Sbjct: 14 QCSECGKSFSGSYRLTQHWITHTREKPSGP 43
Score = 26.7 bits (60), Expect = 9.4
Identities = 9/30 (30%), Positives = 15/30 (50%), Gaps = 1/30 (3%)
Query: 389 RSVHNGKERKFICDICGKQFTSNIHASRHK 418
S G E+ + C CGK F+ + ++H
Sbjct: 4 GSSGEG-EKPYQCSECGKSFSGSYRLTQHW 32
>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein,
phosphorylation, polymorphism, repeat, repressor,
transcription; NMR {Homo sapiens}
Length = 46
Score = 56.4 bits (137), Expect = 2e-10
Identities = 13/37 (35%), Positives = 16/37 (43%)
Query: 1040 HTGERPYKCDVCGSSFKDKWYLGVHMRKHNGEKPYNC 1076
GE+ +KC C F L +H H GEKP
Sbjct: 7 GMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGP 43
Score = 49.8 bits (120), Expect = 5e-08
Identities = 13/42 (30%), Positives = 17/42 (40%), Gaps = 3/42 (7%)
Query: 1009 HMLSHTGEKPFCCHICGK--SLKGNLKDHILKCHTGERPYKC 1048
S GEK + C C S +L+ H H GE+P
Sbjct: 3 SGSSGMGEKTWKCRECDMCFSQASSLRLH-QNVHVGEKPSGP 43
Score = 41.8 bits (99), Expect = 4e-05
Identities = 12/41 (29%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 1966 HMLSHTGEKPFCCDICGK--SLKGNLKAHILRCQGERPYKC 2004
S GEK + C C S +L+ H GE+P
Sbjct: 3 SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGP 43
Score = 40.6 bits (96), Expect = 1e-04
Identities = 10/35 (28%), Positives = 13/35 (37%)
Query: 1062 GVHMRKHNGEKPYNCDYCGQTFAARSTFTFHLKKH 1096
G GEK + C C F+ S+ H H
Sbjct: 1 GSSGSSGMGEKTWKCRECDMCFSQASSLRLHQNVH 35
Score = 38.3 bits (90), Expect = 6e-04
Identities = 7/35 (20%), Positives = 16/35 (45%), Gaps = 4/35 (11%)
Query: 1529 HINTHTGNKPYQCQICNKSFGTRRNYRLHLKRHKR 1563
++ G K ++C+ C+ F + L+ H+
Sbjct: 3 SGSSGMGEKTWKCRECDMCF----SQASSLRLHQN 33
Score = 37.9 bits (89), Expect = 8e-04
Identities = 13/36 (36%), Positives = 16/36 (44%)
Query: 897 TIERKFECDYCKMKFKSKSFLSEHINTHTGNKPYQC 932
E+ ++C C M F S L H N H G KP
Sbjct: 8 MGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGP 43
Score = 37.5 bits (88), Expect = 0.001
Identities = 10/31 (32%), Positives = 14/31 (45%)
Query: 1511 FECDFCKKKFYRNFDLQEHINTHTGNKPYQC 1541
++C C F + L+ H N H G KP
Sbjct: 13 WKCRECDMCFSQASSLRLHQNVHVGEKPSGP 43
Score = 36.4 bits (85), Expect = 0.004
Identities = 10/30 (33%), Positives = 13/30 (43%), Gaps = 1/30 (3%)
Query: 1998 GERPYKCDVCGSSFKDKKHFSVHIRNH-GE 2026
GE+ +KC C F +H H GE
Sbjct: 9 GEKTWKCRECDMCFSQASSLRLHQNVHVGE 38
Score = 34.8 bits (81), Expect = 0.012
Identities = 8/34 (23%), Positives = 16/34 (47%), Gaps = 4/34 (11%)
Query: 920 HINTHTGNKPYQCQICKKSFANKRSYQRDLKRHK 953
++ G K ++C+ C F+ S L+ H+
Sbjct: 3 SGSSGMGEKTWKCRECDMCFSQASS----LRLHQ 32
Score = 34.1 bits (79), Expect = 0.018
Identities = 11/36 (30%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
Query: 1352 TGNK-FECIYCKKKYRRKFDLKEHINKHTGNKPYHC 1386
G K ++C C + + L+ H N H G KP
Sbjct: 8 MGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGP 43
Score = 32.9 bits (76), Expect = 0.048
Identities = 9/33 (27%), Positives = 14/33 (42%)
Query: 632 KKYECDSCNKKFWSKRALSEHMIIHTGIKEHQC 664
K ++C C+ F +L H +H G K
Sbjct: 11 KTWKCRECDMCFSQASSLRLHQNVHVGEKPSGP 43
Score = 32.5 bits (75), Expect = 0.082
Identities = 11/35 (31%), Positives = 15/35 (42%), Gaps = 2/35 (5%)
Query: 989 GDKCHICKVCGA--KIKGNLQKHMLSHTGEKPFCC 1021
G+K C+ C +L+ H H GEKP
Sbjct: 9 GEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGP 43
Score = 30.6 bits (70), Expect = 0.32
Identities = 11/45 (24%), Positives = 14/45 (31%), Gaps = 6/45 (13%)
Query: 652 HMIIHTGIKEHQCHVCNTAFYHIRSLSRHLKIH--EYNESKMYKC 694
G K +C C+ F SL H +H E K
Sbjct: 3 SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGE----KPSGP 43
Score = 30.2 bits (69), Expect = 0.48
Identities = 9/30 (30%), Positives = 12/30 (40%)
Query: 592 VHSSIKRYMCDICGKQFTTLSYLDLHRKSH 621
K + C C F+ S L LH+ H
Sbjct: 6 SGMGEKTWKCRECDMCFSQASSLRLHQNVH 35
Score = 30.2 bits (69), Expect = 0.57
Identities = 10/35 (28%), Positives = 15/35 (42%), Gaps = 2/35 (5%)
Query: 1946 GDKCHVCKVCGA--KIKGNMKRHMLSHTGEKPFCC 1978
G+K C+ C +++ H H GEKP
Sbjct: 9 GEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGP 43
Score = 29.4 bits (67), Expect = 1.1
Identities = 7/33 (21%), Positives = 12/33 (36%), Gaps = 4/33 (12%)
Query: 1374 HINKHTGNKPYHCQICKESFYTLKTYRGDLKRH 1406
+ G K + C+ C F + L+ H
Sbjct: 3 SGSSGMGEKTWKCRECDMCF----SQASSLRLH 31
Score = 27.1 bits (61), Expect = 6.9
Identities = 9/30 (30%), Positives = 11/30 (36%)
Query: 430 ECDYCKRKFTCKRYLAEHINAHTGNTIYGC 459
+C C F+ L H N H G G
Sbjct: 14 KCRECDMCFSQASSLRLHQNVHVGEKPSGP 43
>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 56.4 bits (137), Expect = 3e-10
Identities = 18/37 (48%), Positives = 22/37 (59%)
Query: 1040 HTGERPYKCDVCGSSFKDKWYLGVHMRKHNGEKPYNC 1076
TGE+PY+CDVC +F L H R H+GEKP
Sbjct: 7 GTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGP 43
Score = 46.7 bits (112), Expect = 7e-07
Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
Query: 1009 HMLSHTGEKPFCCHICGK--SLKGNLKDHILKCHTGERPYKC 1048
S TGEKP+ C +C K S +L H + H+GE+P
Sbjct: 3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQ-RVHSGEKPSGP 43
Score = 43.6 bits (104), Expect = 9e-06
Identities = 13/35 (37%), Positives = 18/35 (51%)
Query: 1062 GVHMRKHNGEKPYNCDYCGQTFAARSTFTFHLKKH 1096
G GEKPY CD C + F+ ++ T H + H
Sbjct: 1 GSSGSSGTGEKPYECDVCRKAFSHHASLTQHQRVH 35
Score = 40.2 bits (95), Expect = 1e-04
Identities = 16/41 (39%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Query: 1966 HMLSHTGEKPFCCDICGK--SLKGNLKAHILRCQGERPYKC 2004
S TGEKP+ CD+C K S +L H GE+P
Sbjct: 3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGP 43
Score = 38.6 bits (91), Expect = 5e-04
Identities = 13/38 (34%), Positives = 20/38 (52%)
Query: 895 IKTIERKFECDYCKMKFKSKSFLSEHINTHTGNKPYQC 932
T E+ +ECD C+ F + L++H H+G KP
Sbjct: 6 SGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGP 43
Score = 37.9 bits (89), Expect = 0.001
Identities = 12/35 (34%), Positives = 21/35 (60%), Gaps = 4/35 (11%)
Query: 1529 HINTHTGNKPYQCQICNKSFGTRRNYRLHLKRHKR 1563
++ TG KPY+C +C K+F ++ L +H+R
Sbjct: 3 SGSSGTGEKPYECDVCRKAF----SHHASLTQHQR 33
Score = 37.9 bits (89), Expect = 0.001
Identities = 12/31 (38%), Positives = 17/31 (54%)
Query: 1511 FECDFCKKKFYRNFDLQEHINTHTGNKPYQC 1541
+ECD C+K F + L +H H+G KP
Sbjct: 13 YECDVCRKAFSHHASLTQHQRVHSGEKPSGP 43
Score = 35.2 bits (82), Expect = 0.007
Identities = 14/30 (46%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Query: 1998 GERPYKCDVCGSSFKDKKHFSVHIRNH-GE 2026
GE+PY+CDVC +F + H R H GE
Sbjct: 9 GEKPYECDVCRKAFSHHASLTQHQRVHSGE 38
Score = 34.8 bits (81), Expect = 0.010
Identities = 13/33 (39%), Positives = 18/33 (54%)
Query: 632 KKYECDSCNKKFWSKRALSEHMIIHTGIKEHQC 664
K YECD C K F +L++H +H+G K
Sbjct: 11 KPYECDVCRKAFSHHASLTQHQRVHSGEKPSGP 43
Score = 34.4 bits (80), Expect = 0.013
Identities = 15/45 (33%), Positives = 21/45 (46%), Gaps = 6/45 (13%)
Query: 652 HMIIHTGIKEHQCHVCNTAFYHIRSLSRHLKIH--EYNESKMYKC 694
TG K ++C VC AF H SL++H ++H E K
Sbjct: 3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGE----KPSGP 43
Score = 33.2 bits (77), Expect = 0.039
Identities = 13/36 (36%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Query: 1352 TGNK-FECIYCKKKYRRKFDLKEHINKHTGNKPYHC 1386
TG K +EC C+K + L +H H+G KP
Sbjct: 8 TGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGP 43
Score = 33.2 bits (77), Expect = 0.046
Identities = 12/34 (35%), Positives = 22/34 (64%), Gaps = 4/34 (11%)
Query: 920 HINTHTGNKPYQCQICKKSFANKRSYQRDLKRHK 953
++ TG KPY+C +C+K+F++ S L +H+
Sbjct: 3 SGSSGTGEKPYECDVCRKAFSHHAS----LTQHQ 32
Score = 29.8 bits (68), Expect = 0.69
Identities = 12/35 (34%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
Query: 989 GDKCHICKVCGA--KIKGNLQKHMLSHTGEKPFCC 1021
G+K + C VC +L +H H+GEKP
Sbjct: 9 GEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGP 43
Score = 27.9 bits (63), Expect = 3.1
Identities = 10/34 (29%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 588 HLRHVHSSIKRYMCDICGKQFTTLSYLDLHRKSH 621
+ K Y CD+C K F+ + L H++ H
Sbjct: 3 SGS-SGTGEKPYECDVCRKAFSHHASLTQHQRVH 35
Score = 27.1 bits (61), Expect = 7.1
Identities = 11/35 (31%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
Query: 1946 GDKCHVCKVCGA--KIKGNMKRHMLSHTGEKPFCC 1978
G+K + C VC ++ +H H+GEKP
Sbjct: 9 GEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGP 43
Score = 27.1 bits (61), Expect = 7.5
Identities = 10/33 (30%), Positives = 18/33 (54%), Gaps = 4/33 (12%)
Query: 1374 HINKHTGNKPYHCQICKESFYTLKTYRGDLKRH 1406
+ TG KPY C +C+++F ++ L +H
Sbjct: 3 SGSSGTGEKPYECDVCRKAF----SHHASLTQH 31
Score = 26.7 bits (60), Expect = 9.3
Identities = 10/30 (33%), Positives = 15/30 (50%)
Query: 430 ECDYCKRKFTCKRYLAEHINAHTGNTIYGC 459
ECD C++ F+ L +H H+G G
Sbjct: 14 ECDVCRKAFSHHASLTQHQRVHSGEKPSGP 43
>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 56.3 bits (137), Expect = 3e-10
Identities = 17/37 (45%), Positives = 21/37 (56%)
Query: 1040 HTGERPYKCDVCGSSFKDKWYLGVHMRKHNGEKPYNC 1076
TGE+P++C C +F K L VH R H GEKP
Sbjct: 7 GTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGP 43
Score = 49.4 bits (119), Expect = 8e-08
Identities = 19/42 (45%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
Query: 1009 HMLSHTGEKPFCCHICGK--SLKGNLKDHILKCHTGERPYKC 1048
S TGEKPF C C K + K NL H + HTGE+P
Sbjct: 3 SGSSGTGEKPFECSECQKAFNTKSNLIVH-QRTHTGEKPSGP 43
Score = 43.6 bits (104), Expect = 9e-06
Identities = 18/46 (39%), Positives = 20/46 (43%), Gaps = 10/46 (21%)
Query: 1965 RHMLSHTGEKPFCCDICGK--SLKGNLKAHILRCQ----GERPYKC 2004
S TGEKPF C C K + K NL H Q GE+P
Sbjct: 2 SSGSSGTGEKPFECSECQKAFNTKSNLIVH----QRTHTGEKPSGP 43
Score = 40.2 bits (95), Expect = 1e-04
Identities = 11/35 (31%), Positives = 15/35 (42%)
Query: 1062 GVHMRKHNGEKPYNCDYCGQTFAARSTFTFHLKKH 1096
G GEKP+ C C + F +S H + H
Sbjct: 1 GSSGSSGTGEKPFECSECQKAFNTKSNLIVHQRTH 35
Score = 38.2 bits (90), Expect = 6e-04
Identities = 17/38 (44%), Positives = 20/38 (52%)
Query: 895 IKTIERKFECDYCKMKFKSKSFLSEHINTHTGNKPYQC 932
T E+ FEC C+ F +KS L H THTG KP
Sbjct: 6 SGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGP 43
Score = 37.8 bits (89), Expect = 0.001
Identities = 14/31 (45%), Positives = 16/31 (51%)
Query: 1511 FECDFCKKKFYRNFDLQEHINTHTGNKPYQC 1541
FEC C+K F +L H THTG KP
Sbjct: 13 FECSECQKAFNTKSNLIVHQRTHTGEKPSGP 43
Score = 36.3 bits (85), Expect = 0.003
Identities = 12/33 (36%), Positives = 20/33 (60%)
Query: 1529 HINTHTGNKPYQCQICNKSFGTRRNYRLHLKRH 1561
++ TG KP++C C K+F T+ N +H + H
Sbjct: 3 SGSSGTGEKPFECSECQKAFNTKSNLIVHQRTH 35
Score = 34.8 bits (81), Expect = 0.011
Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Query: 1998 GERPYKCDVCGSSFKDKKHFSVHIRNH-GE 2026
GE+P++C C +F K + VH R H GE
Sbjct: 9 GEKPFECSECQKAFNTKSNLIVHQRTHTGE 38
Score = 34.0 bits (79), Expect = 0.022
Identities = 9/23 (39%), Positives = 15/23 (65%)
Query: 920 HINTHTGNKPYQCQICKKSFANK 942
++ TG KP++C C+K+F K
Sbjct: 3 SGSSGTGEKPFECSECQKAFNTK 25
Score = 33.6 bits (78), Expect = 0.029
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Query: 1352 TGNK-FECIYCKKKYRRKFDLKEHINKHTGNKPYHC 1386
TG K FEC C+K + K +L H HTG KP
Sbjct: 8 TGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGP 43
Score = 32.5 bits (75), Expect = 0.068
Identities = 13/33 (39%), Positives = 15/33 (45%)
Query: 632 KKYECDSCNKKFWSKRALSEHMIIHTGIKEHQC 664
K +EC C K F +K L H HTG K
Sbjct: 11 KPFECSECQKAFNTKSNLIVHQRTHTGEKPSGP 43
Score = 31.3 bits (72), Expect = 0.21
Identities = 14/35 (40%), Positives = 16/35 (45%), Gaps = 2/35 (5%)
Query: 989 GDKCHICKVCGA--KIKGNLQKHMLSHTGEKPFCC 1021
G+K C C K NL H +HTGEKP
Sbjct: 9 GEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGP 43
Score = 30.5 bits (70), Expect = 0.37
Identities = 12/45 (26%), Positives = 15/45 (33%), Gaps = 6/45 (13%)
Query: 652 HMIIHTGIKEHQCHVCNTAFYHIRSLSRHLKIH--EYNESKMYKC 694
TG K +C C AF +L H + H E K
Sbjct: 3 SGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGE----KPSGP 43
Score = 28.6 bits (65), Expect = 1.7
Identities = 13/35 (37%), Positives = 16/35 (45%), Gaps = 2/35 (5%)
Query: 1946 GDKCHVCKVCGA--KIKGNMKRHMLSHTGEKPFCC 1978
G+K C C K N+ H +HTGEKP
Sbjct: 9 GEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGP 43
Score = 28.6 bits (65), Expect = 2.0
Identities = 10/34 (29%), Positives = 16/34 (47%), Gaps = 2/34 (5%)
Query: 590 RH--VHSSIKRYMCDICGKQFTTLSYLDLHRKSH 621
+ K + C C K F T S L +H+++H
Sbjct: 2 SSGSSGTGEKPFECSECQKAFNTKSNLIVHQRTH 35
Score = 27.1 bits (61), Expect = 6.5
Identities = 11/30 (36%), Positives = 13/30 (43%)
Query: 430 ECDYCKRKFTCKRYLAEHINAHTGNTIYGC 459
EC C++ F K L H HTG G
Sbjct: 14 ECSECQKAFNTKSNLIVHQRTHTGEKPSGP 43
>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural
genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 56.4 bits (137), Expect = 3e-10
Identities = 17/37 (45%), Positives = 20/37 (54%)
Query: 1040 HTGERPYKCDVCGSSFKDKWYLGVHMRKHNGEKPYNC 1076
TGE+P+ C CG +F D L H R H GEKP
Sbjct: 7 GTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGP 43
Score = 48.3 bits (116), Expect = 2e-07
Identities = 19/43 (44%), Positives = 21/43 (48%), Gaps = 3/43 (6%)
Query: 1008 KHMLSHTGEKPFCCHICGK--SLKGNLKDHILKCHTGERPYKC 1048
S TGEKPF C CGK S L H + HTGE+P
Sbjct: 2 SSGSSGTGEKPFDCIDCGKAFSDHIGLNQH-RRIHTGEKPSGP 43
Score = 40.2 bits (95), Expect = 1e-04
Identities = 10/33 (30%), Positives = 15/33 (45%)
Query: 1064 HMRKHNGEKPYNCDYCGQTFAARSTFTFHLKKH 1096
GEKP++C CG+ F+ H + H
Sbjct: 3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIH 35
Score = 40.2 bits (95), Expect = 2e-04
Identities = 17/41 (41%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 1966 HMLSHTGEKPFCCDICGK--SLKGNLKAHILRCQGERPYKC 2004
S TGEKPF C CGK S L H GE+P
Sbjct: 3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGP 43
Score = 38.3 bits (90), Expect = 7e-04
Identities = 13/38 (34%), Positives = 17/38 (44%)
Query: 895 IKTIERKFECDYCKMKFKSKSFLSEHINTHTGNKPYQC 932
T E+ F+C C F L++H HTG KP
Sbjct: 6 SGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGP 43
Score = 37.9 bits (89), Expect = 8e-04
Identities = 12/31 (38%), Positives = 15/31 (48%)
Query: 1511 FECDFCKKKFYRNFDLQEHINTHTGNKPYQC 1541
F+C C K F + L +H HTG KP
Sbjct: 13 FDCIDCGKAFSDHIGLNQHRRIHTGEKPSGP 43
Score = 37.5 bits (88), Expect = 0.001
Identities = 11/35 (31%), Positives = 19/35 (54%), Gaps = 4/35 (11%)
Query: 1529 HINTHTGNKPYQCQICNKSFGTRRNYRLHLKRHKR 1563
++ TG KP+ C C K+F + + L +H+R
Sbjct: 3 SGSSGTGEKPFDCIDCGKAF----SDHIGLNQHRR 33
Score = 35.6 bits (83), Expect = 0.006
Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Query: 1998 GERPYKCDVCGSSFKDKKHFSVHIRNH-GE 2026
GE+P+ C CG +F D + H R H GE
Sbjct: 9 GEKPFDCIDCGKAFSDHIGLNQHRRIHTGE 38
Score = 34.4 bits (80), Expect = 0.015
Identities = 12/33 (36%), Positives = 16/33 (48%)
Query: 632 KKYECDSCNKKFWSKRALSEHMIIHTGIKEHQC 664
K ++C C K F L++H IHTG K
Sbjct: 11 KPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGP 43
Score = 34.0 bits (79), Expect = 0.020
Identities = 15/36 (41%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Query: 1352 TGNK-FECIYCKKKYRRKFDLKEHINKHTGNKPYHC 1386
TG K F+CI C K + L +H HTG KP
Sbjct: 8 TGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGP 43
Score = 33.6 bits (78), Expect = 0.027
Identities = 11/33 (33%), Positives = 14/33 (42%)
Query: 652 HMIIHTGIKEHQCHVCNTAFYHIRSLSRHLKIH 684
TG K C C AF L++H +IH
Sbjct: 3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIH 35
Score = 32.9 bits (76), Expect = 0.048
Identities = 10/34 (29%), Positives = 18/34 (52%), Gaps = 4/34 (11%)
Query: 920 HINTHTGNKPYQCQICKKSFANKRSYQRDLKRHK 953
++ TG KP+ C C K+F++ L +H+
Sbjct: 3 SGSSGTGEKPFDCIDCGKAFSDHIG----LNQHR 32
Score = 29.8 bits (68), Expect = 0.80
Identities = 13/35 (37%), Positives = 15/35 (42%), Gaps = 2/35 (5%)
Query: 989 GDKCHICKVCGA--KIKGNLQKHMLSHTGEKPFCC 1021
G+K C CG L +H HTGEKP
Sbjct: 9 GEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGP 43
Score = 29.0 bits (66), Expect = 1.3
Identities = 10/34 (29%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
Query: 588 HLRHVHSSIKRYMCDICGKQFTTLSYLDLHRKSH 621
+ K + C CGK F+ L+ HR+ H
Sbjct: 3 SGS-SGTGEKPFDCIDCGKAFSDHIGLNQHRRIH 35
Score = 27.1 bits (61), Expect = 7.0
Identities = 12/35 (34%), Positives = 15/35 (42%), Gaps = 2/35 (5%)
Query: 1946 GDKCHVCKVCGA--KIKGNMKRHMLSHTGEKPFCC 1978
G+K C CG + +H HTGEKP
Sbjct: 9 GEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGP 43
>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens}
Length = 46
Score = 56.4 bits (137), Expect = 3e-10
Identities = 17/37 (45%), Positives = 20/37 (54%)
Query: 1040 HTGERPYKCDVCGSSFKDKWYLGVHMRKHNGEKPYNC 1076
TGE+PYKC+ CG F + L H H GEKP
Sbjct: 7 GTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGP 43
Score = 47.2 bits (113), Expect = 5e-07
Identities = 17/42 (40%), Positives = 21/42 (50%), Gaps = 3/42 (7%)
Query: 1009 HMLSHTGEKPFCCHICGK--SLKGNLKDHILKCHTGERPYKC 1048
S TGEKP+ C CGK + +L H HTGE+P
Sbjct: 3 SGSSGTGEKPYKCEECGKGFICRRDLYTH-HMVHTGEKPSGP 43
Score = 41.4 bits (98), Expect = 6e-05
Identities = 13/35 (37%), Positives = 15/35 (42%)
Query: 1062 GVHMRKHNGEKPYNCDYCGQTFAARSTFTFHLKKH 1096
G GEKPY C+ CG+ F R H H
Sbjct: 1 GSSGSSGTGEKPYKCEECGKGFICRRDLYTHHMVH 35
Score = 40.6 bits (96), Expect = 1e-04
Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Query: 1966 HMLSHTGEKPFCCDICGK--SLKGNLKAHILRCQGERPYKC 2004
S TGEKP+ C+ CGK + +L H + GE+P
Sbjct: 3 SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGP 43
Score = 37.1 bits (87), Expect = 0.002
Identities = 12/35 (34%), Positives = 16/35 (45%), Gaps = 4/35 (11%)
Query: 1529 HINTHTGNKPYQCQICNKSFGTRRNYRLHLKRHKR 1563
++ TG KPY+C+ C K F R L H
Sbjct: 3 SGSSGTGEKPYKCEECGKGF----ICRRDLYTHHM 33
Score = 36.8 bits (86), Expect = 0.002
Identities = 12/31 (38%), Positives = 15/31 (48%)
Query: 1511 FECDFCKKKFYRNFDLQEHINTHTGNKPYQC 1541
++C+ C K F DL H HTG KP
Sbjct: 13 YKCEECGKGFICRRDLYTHHMVHTGEKPSGP 43
Score = 36.4 bits (85), Expect = 0.003
Identities = 12/38 (31%), Positives = 17/38 (44%)
Query: 895 IKTIERKFECDYCKMKFKSKSFLSEHINTHTGNKPYQC 932
T E+ ++C+ C F + L H HTG KP
Sbjct: 6 SGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGP 43
Score = 35.2 bits (82), Expect = 0.008
Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Query: 1998 GERPYKCDVCGSSFKDKKHFSVHIRNH-GE 2026
GE+PYKC+ CG F ++ H H GE
Sbjct: 9 GEKPYKCEECGKGFICRRDLYTHHMVHTGE 38
Score = 34.1 bits (79), Expect = 0.022
Identities = 13/33 (39%), Positives = 18/33 (54%)
Query: 632 KKYECDSCNKKFWSKRALSEHMIIHTGIKEHQC 664
K Y+C+ C K F +R L H ++HTG K
Sbjct: 11 KPYKCEECGKGFICRRDLYTHHMVHTGEKPSGP 43
Score = 32.9 bits (76), Expect = 0.052
Identities = 12/34 (35%), Positives = 17/34 (50%), Gaps = 4/34 (11%)
Query: 920 HINTHTGNKPYQCQICKKSFANKRSYQRDLKRHK 953
++ TG KPY+C+ C K F +R L H
Sbjct: 3 SGSSGTGEKPYKCEECGKGFICRRD----LYTHH 32
Score = 32.9 bits (76), Expect = 0.058
Identities = 14/36 (38%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Query: 1352 TGNK-FECIYCKKKYRRKFDLKEHINKHTGNKPYHC 1386
TG K ++C C K + + DL H HTG KP
Sbjct: 8 TGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGP 43
Score = 32.5 bits (75), Expect = 0.075
Identities = 12/45 (26%), Positives = 15/45 (33%), Gaps = 6/45 (13%)
Query: 652 HMIIHTGIKEHQCHVCNTAFYHIRSLSRHLKIH--EYNESKMYKC 694
TG K ++C C F R L H +H E K
Sbjct: 3 SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGE----KPSGP 43
Score = 30.6 bits (70), Expect = 0.38
Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Query: 989 GDKCHICKVCGA--KIKGNLQKHMLSHTGEKPFCC 1021
G+K + C+ CG + +L H + HTGEKP
Sbjct: 9 GEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGP 43
Score = 27.9 bits (63), Expect = 3.2
Identities = 12/35 (34%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Query: 1946 GDKCHVCKVCGA--KIKGNMKRHMLSHTGEKPFCC 1978
G+K + C+ CG + ++ H + HTGEKP
Sbjct: 9 GEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGP 43
Score = 27.1 bits (61), Expect = 6.5
Identities = 12/29 (41%), Positives = 14/29 (48%), Gaps = 4/29 (13%)
Query: 1378 HTGNKPYHCQICKESFYTLKTYRGDLKRH 1406
TG KPY C+ C + F R DL H
Sbjct: 7 GTGEKPYKCEECGKGF----ICRRDLYTH 31
Score = 27.1 bits (61), Expect = 6.5
Identities = 10/30 (33%), Positives = 12/30 (40%)
Query: 592 VHSSIKRYMCDICGKQFTTLSYLDLHRKSH 621
+ K Y C+ CGK F L H H
Sbjct: 6 SGTGEKPYKCEECGKGFICRRDLYTHHMVH 35
Score = 27.1 bits (61), Expect = 6.9
Identities = 11/30 (36%), Positives = 15/30 (50%)
Query: 430 ECDYCKRKFTCKRYLAEHINAHTGNTIYGC 459
+C+ C + F C+R L H HTG G
Sbjct: 14 KCEECGKGFICRRDLYTHHMVHTGEKPSGP 43
>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 56.4 bits (137), Expect = 3e-10
Identities = 19/37 (51%), Positives = 22/37 (59%)
Query: 1040 HTGERPYKCDVCGSSFKDKWYLGVHMRKHNGEKPYNC 1076
TGERP+KC+ CG SF +L H R H GEKP
Sbjct: 7 GTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGP 43
Score = 46.3 bits (111), Expect = 8e-07
Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
Query: 1009 HMLSHTGEKPFCCHICGKSL--KGNLKDHILKCHTGERPYKC 1048
S TGE+P C+ CGKS +L H + HTGE+P
Sbjct: 3 SGSSGTGERPHKCNECGKSFIQSAHLIQH-QRIHTGEKPSGP 43
Score = 42.5 bits (101), Expect = 2e-05
Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 6/44 (13%)
Query: 1965 RHMLSHTGEKPFCCDICGKSLKGNLKAHILRCQ----GERPYKC 2004
S TGE+P C+ CGKS AH+++ Q GE+P
Sbjct: 2 SSGSSGTGERPHKCNECGKSF--IQSAHLIQHQRIHTGEKPSGP 43
Score = 38.6 bits (91), Expect = 5e-04
Identities = 10/35 (28%), Positives = 17/35 (48%)
Query: 1062 GVHMRKHNGEKPYNCDYCGQTFAARSTFTFHLKKH 1096
G GE+P+ C+ CG++F + H + H
Sbjct: 1 GSSGSSGTGERPHKCNECGKSFIQSAHLIQHQRIH 35
Score = 37.9 bits (89), Expect = 9e-04
Identities = 13/38 (34%), Positives = 17/38 (44%)
Query: 895 IKTIERKFECDYCKMKFKSKSFLSEHINTHTGNKPYQC 932
T ER +C+ C F + L +H HTG KP
Sbjct: 6 SGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGP 43
Score = 37.9 bits (89), Expect = 0.001
Identities = 12/35 (34%), Positives = 19/35 (54%), Gaps = 4/35 (11%)
Query: 1529 HINTHTGNKPYQCQICNKSFGTRRNYRLHLKRHKR 1563
++ TG +P++C C KSF HL +H+R
Sbjct: 3 SGSSGTGERPHKCNECGKSF----IQSAHLIQHQR 33
Score = 37.5 bits (88), Expect = 0.001
Identities = 13/38 (34%), Positives = 19/38 (50%)
Query: 1504 IKTIQRKFECDFCKKKFYRNFDLQEHINTHTGNKPYQC 1541
T +R +C+ C K F ++ L +H HTG KP
Sbjct: 6 SGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGP 43
Score = 35.6 bits (83), Expect = 0.005
Identities = 16/30 (53%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Query: 1998 GERPYKCDVCGSSFKDKKHFSVHIRNH-GE 2026
GERP+KC+ CG SF H H R H GE
Sbjct: 9 GERPHKCNECGKSFIQSAHLIQHQRIHTGE 38
Score = 34.0 bits (79), Expect = 0.024
Identities = 11/33 (33%), Positives = 16/33 (48%)
Query: 632 KKYECDSCNKKFWSKRALSEHMIIHTGIKEHQC 664
+ ++C+ C K F L +H IHTG K
Sbjct: 11 RPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGP 43
Score = 33.6 bits (78), Expect = 0.027
Identities = 12/36 (33%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Query: 1352 TGNK-FECIYCKKKYRRKFDLKEHINKHTGNKPYHC 1386
TG + +C C K + + L +H HTG KP
Sbjct: 8 TGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGP 43
Score = 31.7 bits (73), Expect = 0.13
Identities = 8/23 (34%), Positives = 13/23 (56%)
Query: 920 HINTHTGNKPYQCQICKKSFANK 942
++ TG +P++C C KSF
Sbjct: 3 SGSSGTGERPHKCNECGKSFIQS 25
Score = 31.7 bits (73), Expect = 0.16
Identities = 12/45 (26%), Positives = 18/45 (40%), Gaps = 6/45 (13%)
Query: 652 HMIIHTGIKEHQCHVCNTAFYHIRSLSRHLKIH--EYNESKMYKC 694
TG + H+C+ C +F L +H +IH E K
Sbjct: 3 SGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGE----KPSGP 43
Score = 28.6 bits (65), Expect = 1.6
Identities = 13/35 (37%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
Query: 989 GDKCHICKVCGAKI--KGNLQKHMLSHTGEKPFCC 1021
G++ H C CG +L +H HTGEKP
Sbjct: 9 GERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGP 43
Score = 26.7 bits (60), Expect = 8.1
Identities = 9/30 (30%), Positives = 14/30 (46%)
Query: 430 ECDYCKRKFTCKRYLAEHINAHTGNTIYGC 459
+C+ C + F +L +H HTG G
Sbjct: 14 KCNECGKSFIQSAHLIQHQRIHTGEKPSGP 43
Score = 26.7 bits (60), Expect = 8.4
Identities = 12/35 (34%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
Query: 1946 GDKCHVCKVCGAKI--KGNMKRHMLSHTGEKPFCC 1978
G++ H C CG ++ +H HTGEKP
Sbjct: 9 GERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGP 43
>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 42
Score = 56.0 bits (136), Expect = 3e-10
Identities = 17/36 (47%), Positives = 22/36 (61%)
Query: 1040 HTGERPYKCDVCGSSFKDKWYLGVHMRKHNGEKPYN 1075
GE+PY+CD CG +F K L VH+R H G P +
Sbjct: 6 SGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPSS 41
Score = 42.9 bits (102), Expect = 1e-05
Identities = 12/33 (36%), Positives = 18/33 (54%)
Query: 1064 HMRKHNGEKPYNCDYCGQTFAARSTFTFHLKKH 1096
GEKPY CD CG+ F+ + + H++ H
Sbjct: 2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVH 34
Score = 40.6 bits (96), Expect = 7e-05
Identities = 18/39 (46%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
Query: 1966 HMLSHTGEKPFCCDICGK--SLKGNLKAHILRCQGERPY 2002
S GEKP+ CD CGK S KG+L HI G P
Sbjct: 2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPS 40
Score = 38.7 bits (91), Expect = 4e-04
Identities = 16/30 (53%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Query: 1998 GERPYKCDVCGSSFKDKKHFSVHIRNH-GE 2026
GE+PY+CD CG +F K VHIR H G
Sbjct: 8 GEKPYRCDQCGKAFSQKGSLIVHIRVHTGS 37
Score = 36.8 bits (86), Expect = 0.002
Identities = 11/35 (31%), Positives = 16/35 (45%), Gaps = 4/35 (11%)
Query: 1529 HINTHTGNKPYQCQICNKSFGTRRNYRLHLKRHKR 1563
+ G KPY+C C K+F + + L H R
Sbjct: 2 SSGSSGGEKPYRCDQCGKAF----SQKGSLIVHIR 32
Score = 36.8 bits (86), Expect = 0.002
Identities = 13/36 (36%), Positives = 16/36 (44%)
Query: 895 IKTIERKFECDYCKMKFKSKSFLSEHINTHTGNKPY 930
E+ + CD C F K L HI HTG+ P
Sbjct: 5 SSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPS 40
Score = 35.2 bits (82), Expect = 0.006
Identities = 12/29 (41%), Positives = 15/29 (51%)
Query: 1511 FECDFCKKKFYRNFDLQEHINTHTGNKPY 1539
+ CD C K F + L HI HTG+ P
Sbjct: 12 YRCDQCGKAFSQKGSLIVHIRVHTGSGPS 40
Score = 33.7 bits (78), Expect = 0.022
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 920 HINTHTGNKPYQCQICKKSFANKRS 944
+ G KPY+C C K+F+ K S
Sbjct: 2 SSGSSGGEKPYRCDQCGKAFSQKGS 26
Score = 33.3 bits (77), Expect = 0.032
Identities = 13/29 (44%), Positives = 16/29 (55%)
Query: 632 KKYECDSCNKKFWSKRALSEHMIIHTGIK 660
K Y CD C K F K +L H+ +HTG
Sbjct: 10 KPYRCDQCGKAFSQKGSLIVHIRVHTGSG 38
Score = 32.9 bits (76), Expect = 0.049
Identities = 10/33 (30%), Positives = 15/33 (45%)
Query: 652 HMIIHTGIKEHQCHVCNTAFYHIRSLSRHLKIH 684
G K ++C C AF SL H+++H
Sbjct: 2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVH 34
Score = 32.5 bits (75), Expect = 0.068
Identities = 13/34 (38%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 1352 TGNK-FECIYCKKKYRRKFDLKEHINKHTGNKPY 1384
G K + C C K + +K L HI HTG+ P
Sbjct: 7 GGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPS 40
Score = 31.0 bits (71), Expect = 0.20
Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 2/33 (6%)
Query: 989 GDKCHICKVCGAKI--KGNLQKHMLSHTGEKPF 1019
G+K + C CG KG+L H+ HTG P
Sbjct: 8 GEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPS 40
Score = 29.5 bits (67), Expect = 0.81
Identities = 11/34 (32%), Positives = 14/34 (41%), Gaps = 1/34 (2%)
Query: 588 HLRHVHSSIKRYMCDICGKQFTTLSYLDLHRKSH 621
K Y CD CGK F+ L +H + H
Sbjct: 2 SSG-SSGGEKPYRCDQCGKAFSQKGSLIVHIRVH 34
Score = 28.7 bits (65), Expect = 1.4
Identities = 12/33 (36%), Positives = 17/33 (51%), Gaps = 2/33 (6%)
Query: 1946 GDKCHVCKVCGAKI--KGNMKRHMLSHTGEKPF 1976
G+K + C CG KG++ H+ HTG P
Sbjct: 8 GEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPS 40
Score = 28.3 bits (64), Expect = 2.4
Identities = 10/33 (30%), Positives = 14/33 (42%), Gaps = 4/33 (12%)
Query: 1374 HINKHTGNKPYHCQICKESFYTLKTYRGDLKRH 1406
G KPY C C ++F + +G L H
Sbjct: 2 SSGSSGGEKPYRCDQCGKAF----SQKGSLIVH 30
>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A
Length = 46
Score = 56.4 bits (137), Expect = 3e-10
Identities = 17/37 (45%), Positives = 20/37 (54%)
Query: 1040 HTGERPYKCDVCGSSFKDKWYLGVHMRKHNGEKPYNC 1076
TGE+P++C CG SF L H R H GEKP
Sbjct: 7 GTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGP 43
Score = 49.0 bits (118), Expect = 9e-08
Identities = 19/43 (44%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
Query: 1008 KHMLSHTGEKPFCCHICGK--SLKGNLKDHILKCHTGERPYKC 1048
S TGEKPF C CGK S+ L H + HTGE+P
Sbjct: 2 SSGSSGTGEKPFECAECGKSFSISSQLATH-QRIHTGEKPSGP 43
Score = 43.3 bits (103), Expect = 1e-05
Identities = 17/42 (40%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Query: 1965 RHMLSHTGEKPFCCDICGK--SLKGNLKAHILRCQGERPYKC 2004
S TGEKPF C CGK S+ L H GE+P
Sbjct: 2 SSGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGP 43
Score = 41.3 bits (98), Expect = 6e-05
Identities = 12/35 (34%), Positives = 17/35 (48%)
Query: 1062 GVHMRKHNGEKPYNCDYCGQTFAARSTFTFHLKKH 1096
G GEKP+ C CG++F+ S H + H
Sbjct: 1 GSSGSSGTGEKPFECAECGKSFSISSQLATHQRIH 35
Score = 38.6 bits (91), Expect = 5e-04
Identities = 15/38 (39%), Positives = 17/38 (44%)
Query: 895 IKTIERKFECDYCKMKFKSKSFLSEHINTHTGNKPYQC 932
T E+ FEC C F S L+ H HTG KP
Sbjct: 6 SGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGP 43
Score = 37.1 bits (87), Expect = 0.002
Identities = 13/31 (41%), Positives = 14/31 (45%)
Query: 1511 FECDFCKKKFYRNFDLQEHINTHTGNKPYQC 1541
FEC C K F + L H HTG KP
Sbjct: 13 FECAECGKSFSISSQLATHQRIHTGEKPSGP 43
Score = 37.1 bits (87), Expect = 0.002
Identities = 12/35 (34%), Positives = 18/35 (51%), Gaps = 4/35 (11%)
Query: 1529 HINTHTGNKPYQCQICNKSFGTRRNYRLHLKRHKR 1563
++ TG KP++C C KSF + L H+R
Sbjct: 3 SGSSGTGEKPFECAECGKSF----SISSQLATHQR 33
Score = 35.9 bits (84), Expect = 0.005
Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Query: 1998 GERPYKCDVCGSSFKDKKHFSVHIRNH-GE 2026
GE+P++C CG SF + H R H GE
Sbjct: 9 GEKPFECAECGKSFSISSQLATHQRIHTGE 38
Score = 34.4 bits (80), Expect = 0.018
Identities = 15/36 (41%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
Query: 1352 TGNK-FECIYCKKKYRRKFDLKEHINKHTGNKPYHC 1386
TG K FEC C K + L H HTG KP
Sbjct: 8 TGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGP 43
Score = 34.0 bits (79), Expect = 0.020
Identities = 13/33 (39%), Positives = 15/33 (45%)
Query: 632 KKYECDSCNKKFWSKRALSEHMIIHTGIKEHQC 664
K +EC C K F L+ H IHTG K
Sbjct: 11 KPFECAECGKSFSISSQLATHQRIHTGEKPSGP 43
Score = 33.6 bits (78), Expect = 0.034
Identities = 9/23 (39%), Positives = 14/23 (60%)
Query: 920 HINTHTGNKPYQCQICKKSFANK 942
++ TG KP++C C KSF+
Sbjct: 3 SGSSGTGEKPFECAECGKSFSIS 25
Score = 31.7 bits (73), Expect = 0.13
Identities = 12/45 (26%), Positives = 16/45 (35%), Gaps = 6/45 (13%)
Query: 652 HMIIHTGIKEHQCHVCNTAFYHIRSLSRHLKIH--EYNESKMYKC 694
TG K +C C +F L+ H +IH E K
Sbjct: 3 SGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGE----KPSGP 43
Score = 30.2 bits (69), Expect = 0.48
Identities = 14/35 (40%), Positives = 15/35 (42%), Gaps = 2/35 (5%)
Query: 989 GDKCHICKVCGA--KIKGNLQKHMLSHTGEKPFCC 1021
G+K C CG I L H HTGEKP
Sbjct: 9 GEKPFECAECGKSFSISSQLATHQRIHTGEKPSGP 43
Score = 27.9 bits (63), Expect = 3.4
Identities = 11/30 (36%), Positives = 13/30 (43%)
Query: 430 ECDYCKRKFTCKRYLAEHINAHTGNTIYGC 459
EC C + F+ LA H HTG G
Sbjct: 14 ECAECGKSFSISSQLATHQRIHTGEKPSGP 43
Score = 27.9 bits (63), Expect = 3.4
Identities = 13/35 (37%), Positives = 15/35 (42%), Gaps = 2/35 (5%)
Query: 1946 GDKCHVCKVCGA--KIKGNMKRHMLSHTGEKPFCC 1978
G+K C CG I + H HTGEKP
Sbjct: 9 GEKPFECAECGKSFSISSQLATHQRIHTGEKPSGP 43
Score = 27.5 bits (62), Expect = 4.1
Identities = 10/34 (29%), Positives = 15/34 (44%), Gaps = 2/34 (5%)
Query: 590 RH--VHSSIKRYMCDICGKQFTTLSYLDLHRKSH 621
+ K + C CGK F+ S L H++ H
Sbjct: 2 SSGSSGTGEKPFECAECGKSFSISSQLATHQRIH 35
Score = 27.1 bits (61), Expect = 7.5
Identities = 10/33 (30%), Positives = 14/33 (42%), Gaps = 4/33 (12%)
Query: 1374 HINKHTGNKPYHCQICKESFYTLKTYRGDLKRH 1406
+ TG KP+ C C +SF + L H
Sbjct: 3 SGSSGTGEKPFECAECGKSF----SISSQLATH 31
>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 56.4 bits (137), Expect = 3e-10
Identities = 18/39 (46%), Positives = 21/39 (53%)
Query: 1038 KCHTGERPYKCDVCGSSFKDKWYLGVHMRKHNGEKPYNC 1076
TGER Y+C CG +F K L +H R H GEKP
Sbjct: 5 SSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGP 43
Score = 47.5 bits (114), Expect = 3e-07
Identities = 15/43 (34%), Positives = 19/43 (44%), Gaps = 3/43 (6%)
Query: 1008 KHMLSHTGEKPFCCHICGK--SLKGNLKDHILKCHTGERPYKC 1048
S TGE+ + C CGK K L H + H GE+P
Sbjct: 2 SSGSSGTGERHYECSECGKAFIQKSTLSMH-QRIHRGEKPSGP 43
Score = 42.5 bits (101), Expect = 2e-05
Identities = 12/35 (34%), Positives = 17/35 (48%)
Query: 1062 GVHMRKHNGEKPYNCDYCGQTFAARSTFTFHLKKH 1096
G GE+ Y C CG+ F +ST + H + H
Sbjct: 1 GSSGSSGTGERHYECSECGKAFIQKSTLSMHQRIH 35
Score = 39.8 bits (94), Expect = 2e-04
Identities = 14/41 (34%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 1966 HMLSHTGEKPFCCDICGK--SLKGNLKAHILRCQGERPYKC 2004
S TGE+ + C CGK K L H +GE+P
Sbjct: 3 SGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGP 43
Score = 38.3 bits (90), Expect = 6e-04
Identities = 16/38 (42%), Positives = 17/38 (44%)
Query: 895 IKTIERKFECDYCKMKFKSKSFLSEHINTHTGNKPYQC 932
T ER +EC C F KS LS H H G KP
Sbjct: 6 SGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGP 43
Score = 36.3 bits (85), Expect = 0.003
Identities = 11/31 (35%), Positives = 13/31 (41%)
Query: 1511 FECDFCKKKFYRNFDLQEHINTHTGNKPYQC 1541
+EC C K F + L H H G KP
Sbjct: 13 YECSECGKAFIQKSTLSMHQRIHRGEKPSGP 43
Score = 36.0 bits (84), Expect = 0.005
Identities = 10/36 (27%), Positives = 17/36 (47%), Gaps = 4/36 (11%)
Query: 1528 EHINTHTGNKPYQCQICNKSFGTRRNYRLHLKRHKR 1563
++ TG + Y+C C K+F + L H+R
Sbjct: 2 SSGSSGTGERHYECSECGKAF----IQKSTLSMHQR 33
Score = 35.6 bits (83), Expect = 0.006
Identities = 15/30 (50%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Query: 1998 GERPYKCDVCGSSFKDKKHFSVHIRNH-GE 2026
GER Y+C CG +F K S+H R H GE
Sbjct: 9 GERHYECSECGKAFIQKSTLSMHQRIHRGE 38
Score = 34.4 bits (80), Expect = 0.014
Identities = 14/33 (42%), Positives = 15/33 (45%)
Query: 632 KKYECDSCNKKFWSKRALSEHMIIHTGIKEHQC 664
+ YEC C K F K LS H IH G K
Sbjct: 11 RHYECSECGKAFIQKSTLSMHQRIHRGEKPSGP 43
Score = 33.3 bits (77), Expect = 0.034
Identities = 11/34 (32%), Positives = 16/34 (47%)
Query: 651 EHMIIHTGIKEHQCHVCNTAFYHIRSLSRHLKIH 684
TG + ++C C AF +LS H +IH
Sbjct: 2 SSGSSGTGERHYECSECGKAFIQKSTLSMHQRIH 35
Score = 33.3 bits (77), Expect = 0.042
Identities = 13/36 (36%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Query: 1352 TGNK-FECIYCKKKYRRKFDLKEHINKHTGNKPYHC 1386
TG + +EC C K + +K L H H G KP
Sbjct: 8 TGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGP 43
Score = 32.9 bits (76), Expect = 0.049
Identities = 8/24 (33%), Positives = 13/24 (54%)
Query: 919 EHINTHTGNKPYQCQICKKSFANK 942
++ TG + Y+C C K+F K
Sbjct: 2 SSGSSGTGERHYECSECGKAFIQK 25
Score = 29.0 bits (66), Expect = 1.2
Identities = 12/35 (34%), Positives = 15/35 (42%), Gaps = 2/35 (5%)
Query: 989 GDKCHICKVCGAKI--KGNLQKHMLSHTGEKPFCC 1021
G++ + C CG K L H H GEKP
Sbjct: 9 GERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGP 43
Score = 27.9 bits (63), Expect = 3.8
Identities = 10/34 (29%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
Query: 588 HLRHVHSSIKRYMCDICGKQFTTLSYLDLHRKSH 621
+ + Y C CGK F S L +H++ H
Sbjct: 3 SGS-SGTGERHYECSECGKAFIQKSTLSMHQRIH 35
Score = 26.7 bits (60), Expect = 8.2
Identities = 11/35 (31%), Positives = 15/35 (42%), Gaps = 2/35 (5%)
Query: 1946 GDKCHVCKVCGAKI--KGNMKRHMLSHTGEKPFCC 1978
G++ + C CG K + H H GEKP
Sbjct: 9 GERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGP 43
Score = 26.7 bits (60), Expect = 9.1
Identities = 10/30 (33%), Positives = 12/30 (40%)
Query: 430 ECDYCKRKFTCKRYLAEHINAHTGNTIYGC 459
EC C + F K L+ H H G G
Sbjct: 14 ECSECGKAFIQKSTLSMHQRIHRGEKPSGP 43
>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 56.4 bits (137), Expect = 3e-10
Identities = 18/37 (48%), Positives = 21/37 (56%)
Query: 1040 HTGERPYKCDVCGSSFKDKWYLGVHMRKHNGEKPYNC 1076
TGE PY+C CG +F K+ L H R H GEKP
Sbjct: 7 GTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGP 43
Score = 48.7 bits (117), Expect = 1e-07
Identities = 18/42 (42%), Positives = 21/42 (50%), Gaps = 3/42 (7%)
Query: 1009 HMLSHTGEKPFCCHICGK--SLKGNLKDHILKCHTGERPYKC 1048
S TGE P+ CH CGK S K L H + H GE+P
Sbjct: 3 SGSSGTGENPYECHECGKAFSRKYQLISH-QRTHAGEKPSGP 43
Score = 42.1 bits (100), Expect = 3e-05
Identities = 11/35 (31%), Positives = 15/35 (42%)
Query: 1062 GVHMRKHNGEKPYNCDYCGQTFAARSTFTFHLKKH 1096
G GE PY C CG+ F+ + H + H
Sbjct: 1 GSSGSSGTGENPYECHECGKAFSRKYQLISHQRTH 35
Score = 42.1 bits (100), Expect = 3e-05
Identities = 16/42 (38%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Query: 1965 RHMLSHTGEKPFCCDICGK--SLKGNLKAHILRCQGERPYKC 2004
S TGE P+ C CGK S K L +H GE+P
Sbjct: 2 SSGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGP 43
Score = 39.8 bits (94), Expect = 2e-04
Identities = 14/38 (36%), Positives = 15/38 (39%)
Query: 895 IKTIERKFECDYCKMKFKSKSFLSEHINTHTGNKPYQC 932
T E +EC C F K L H TH G KP
Sbjct: 6 SGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGP 43
Score = 39.4 bits (93), Expect = 2e-04
Identities = 13/31 (41%), Positives = 15/31 (48%)
Query: 1511 FECDFCKKKFYRNFDLQEHINTHTGNKPYQC 1541
+EC C K F R + L H TH G KP
Sbjct: 13 YECHECGKAFSRKYQLISHQRTHAGEKPSGP 43
Score = 36.3 bits (85), Expect = 0.003
Identities = 14/36 (38%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Query: 1352 TGNK-FECIYCKKKYRRKFDLKEHINKHTGNKPYHC 1386
TG +EC C K + RK+ L H H G KP
Sbjct: 8 TGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGP 43
Score = 35.6 bits (83), Expect = 0.005
Identities = 14/30 (46%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Query: 1998 GERPYKCDVCGSSFKDKKHFSVHIRNH-GE 2026
GE PY+C CG +F K H R H GE
Sbjct: 9 GENPYECHECGKAFSRKYQLISHQRTHAGE 38
Score = 35.6 bits (83), Expect = 0.006
Identities = 11/35 (31%), Positives = 18/35 (51%), Gaps = 4/35 (11%)
Query: 1529 HINTHTGNKPYQCQICNKSFGTRRNYRLHLKRHKR 1563
++ TG PY+C C K+F + + L H+R
Sbjct: 3 SGSSGTGENPYECHECGKAF----SRKYQLISHQR 33
Score = 33.3 bits (77), Expect = 0.037
Identities = 12/33 (36%), Positives = 12/33 (36%)
Query: 632 KKYECDSCNKKFWSKRALSEHMIIHTGIKEHQC 664
YEC C K F K L H H G K
Sbjct: 11 NPYECHECGKAFSRKYQLISHQRTHAGEKPSGP 43
Score = 32.9 bits (76), Expect = 0.049
Identities = 9/23 (39%), Positives = 14/23 (60%)
Query: 920 HINTHTGNKPYQCQICKKSFANK 942
++ TG PY+C C K+F+ K
Sbjct: 3 SGSSGTGENPYECHECGKAFSRK 25
Score = 32.9 bits (76), Expect = 0.064
Identities = 12/45 (26%), Positives = 15/45 (33%), Gaps = 6/45 (13%)
Query: 652 HMIIHTGIKEHQCHVCNTAFYHIRSLSRHLKIH--EYNESKMYKC 694
TG ++CH C AF L H + H E K
Sbjct: 3 SGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGE----KPSGP 43
Score = 29.4 bits (67), Expect = 1.0
Identities = 12/35 (34%), Positives = 15/35 (42%), Gaps = 2/35 (5%)
Query: 989 GDKCHICKVCGAKI--KGNLQKHMLSHTGEKPFCC 1021
G+ + C CG K L H +H GEKP
Sbjct: 9 GENPYECHECGKAFSRKYQLISHQRTHAGEKPSGP 43
Score = 27.1 bits (61), Expect = 7.3
Identities = 10/30 (33%), Positives = 12/30 (40%)
Query: 430 ECDYCKRKFTCKRYLAEHINAHTGNTIYGC 459
EC C + F+ K L H H G G
Sbjct: 14 ECHECGKAFSRKYQLISHQRTHAGEKPSGP 43
Score = 27.1 bits (61), Expect = 7.4
Identities = 9/30 (30%), Positives = 14/30 (46%)
Query: 592 VHSSIKRYMCDICGKQFTTLSYLDLHRKSH 621
+ Y C CGK F+ L H+++H
Sbjct: 6 SGTGENPYECHECGKAFSRKYQLISHQRTH 35
Score = 26.7 bits (60), Expect = 8.2
Identities = 11/35 (31%), Positives = 15/35 (42%), Gaps = 2/35 (5%)
Query: 1946 GDKCHVCKVCGAKI--KGNMKRHMLSHTGEKPFCC 1978
G+ + C CG K + H +H GEKP
Sbjct: 9 GENPYECHECGKAFSRKYQLISHQRTHAGEKPSGP 43
>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 56.0 bits (136), Expect = 3e-10
Identities = 17/37 (45%), Positives = 22/37 (59%)
Query: 1040 HTGERPYKCDVCGSSFKDKWYLGVHMRKHNGEKPYNC 1076
TGE+PY+C VC +F K +L H + H GEKP
Sbjct: 7 GTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGP 43
Score = 47.5 bits (114), Expect = 3e-07
Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 3/43 (6%)
Query: 1008 KHMLSHTGEKPFCCHICGK--SLKGNLKDHILKCHTGERPYKC 1048
S TGEKP+ C +C K + K +L H K HTGE+P
Sbjct: 2 SSGSSGTGEKPYECKVCSKAFTQKAHLAQH-QKTHTGEKPSGP 43
Score = 41.7 bits (99), Expect = 4e-05
Identities = 12/35 (34%), Positives = 15/35 (42%)
Query: 1062 GVHMRKHNGEKPYNCDYCGQTFAARSTFTFHLKKH 1096
G GEKPY C C + F ++ H K H
Sbjct: 1 GSSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTH 35
Score = 41.4 bits (98), Expect = 5e-05
Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Query: 1965 RHMLSHTGEKPFCCDICGK--SLKGNLKAHILRCQGERPYKC 2004
S TGEKP+ C +C K + K +L H GE+P
Sbjct: 2 SSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGP 43
Score = 40.6 bits (96), Expect = 1e-04
Identities = 15/38 (39%), Positives = 20/38 (52%)
Query: 895 IKTIERKFECDYCKMKFKSKSFLSEHINTHTGNKPYQC 932
T E+ +EC C F K+ L++H THTG KP
Sbjct: 6 SGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGP 43
Score = 39.1 bits (92), Expect = 4e-04
Identities = 13/31 (41%), Positives = 16/31 (51%)
Query: 1511 FECDFCKKKFYRNFDLQEHINTHTGNKPYQC 1541
+EC C K F + L +H THTG KP
Sbjct: 13 YECKVCSKAFTQKAHLAQHQKTHTGEKPSGP 43
Score = 37.1 bits (87), Expect = 0.002
Identities = 12/35 (34%), Positives = 23/35 (65%), Gaps = 4/35 (11%)
Query: 1529 HINTHTGNKPYQCQICNKSFGTRRNYRLHLKRHKR 1563
++ TG KPY+C++C+K+F + HL +H++
Sbjct: 3 SGSSGTGEKPYECKVCSKAF----TQKAHLAQHQK 33
Score = 36.4 bits (85), Expect = 0.003
Identities = 14/30 (46%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Query: 1998 GERPYKCDVCGSSFKDKKHFSVHIRNH-GE 2026
GE+PY+C VC +F K H + H + H GE
Sbjct: 9 GEKPYECKVCSKAFTQKAHLAQHQKTHTGE 38
Score = 35.6 bits (83), Expect = 0.006
Identities = 14/33 (42%), Positives = 17/33 (51%)
Query: 632 KKYECDSCNKKFWSKRALSEHMIIHTGIKEHQC 664
K YEC C+K F K L++H HTG K
Sbjct: 11 KPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGP 43
Score = 34.4 bits (80), Expect = 0.014
Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Query: 1352 TGNK-FECIYCKKKYRRKFDLKEHINKHTGNKPYHC 1386
TG K +EC C K + +K L +H HTG KP
Sbjct: 8 TGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGP 43
Score = 32.5 bits (75), Expect = 0.075
Identities = 10/23 (43%), Positives = 16/23 (69%)
Query: 920 HINTHTGNKPYQCQICKKSFANK 942
++ TG KPY+C++C K+F K
Sbjct: 3 SGSSGTGEKPYECKVCSKAFTQK 25
Score = 32.5 bits (75), Expect = 0.080
Identities = 12/33 (36%), Positives = 17/33 (51%)
Query: 652 HMIIHTGIKEHQCHVCNTAFYHIRSLSRHLKIH 684
TG K ++C VC+ AF L++H K H
Sbjct: 3 SGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTH 35
Score = 31.0 bits (71), Expect = 0.29
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
Query: 989 GDKCHICKVCGAKI--KGNLQKHMLSHTGEKPFCC 1021
G+K + CKVC K +L +H +HTGEKP
Sbjct: 9 GEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGP 43
Score = 28.7 bits (65), Expect = 1.8
Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
Query: 1946 GDKCHVCKVCGAKI--KGNMKRHMLSHTGEKPFCC 1978
G+K + CKVC K ++ +H +HTGEKP
Sbjct: 9 GEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGP 43
Score = 27.9 bits (63), Expect = 3.0
Identities = 13/30 (43%), Positives = 16/30 (53%)
Query: 430 ECDYCKRKFTCKRYLAEHINAHTGNTIYGC 459
EC C + FT K +LA+H HTG G
Sbjct: 14 ECKVCSKAFTQKAHLAQHQKTHTGEKPSGP 43
Score = 27.9 bits (63), Expect = 3.4
Identities = 11/34 (32%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 588 HLRHVHSSIKRYMCDICGKQFTTLSYLDLHRKSH 621
+ K Y C +C K FT ++L H+K+H
Sbjct: 3 SGS-SGTGEKPYECKVCSKAFTQKAHLAQHQKTH 35
>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 56.0 bits (136), Expect = 3e-10
Identities = 14/37 (37%), Positives = 21/37 (56%)
Query: 1040 HTGERPYKCDVCGSSFKDKWYLGVHMRKHNGEKPYNC 1076
+GERPY C+ CG +F +L H+++H EK
Sbjct: 7 GSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGP 43
Score = 48.3 bits (116), Expect = 2e-07
Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 3/42 (7%)
Query: 1009 HMLSHTGEKPFCCHICGK--SLKGNLKDHILKCHTGERPYKC 1048
S +GE+P+ C+ CGK +L +H LK H E+
Sbjct: 3 SGSSGSGERPYGCNECGKNFGRHSHLIEH-LKRHFREKSSGP 43
Score = 41.3 bits (98), Expect = 5e-05
Identities = 14/35 (40%), Positives = 19/35 (54%)
Query: 1062 GVHMRKHNGEKPYNCDYCGQTFAARSTFTFHLKKH 1096
G +GE+PY C+ CG+ F S HLK+H
Sbjct: 1 GSSGSSGSGERPYGCNECGKNFGRHSHLIEHLKRH 35
Score = 41.0 bits (97), Expect = 7e-05
Identities = 10/35 (28%), Positives = 16/35 (45%), Gaps = 4/35 (11%)
Query: 1529 HINTHTGNKPYQCQICNKSFGTRRNYRLHLKRHKR 1563
++ +G +PY C C K+F HL H +
Sbjct: 3 SGSSGSGERPYGCNECGKNF----GRHSHLIEHLK 33
Score = 40.2 bits (95), Expect = 1e-04
Identities = 10/43 (23%), Positives = 19/43 (44%), Gaps = 6/43 (13%)
Query: 1966 HMLSHTGEKPFCCDICGKSLKGNLKAHILRCQ----GERPYKC 2004
S +GE+P+ C+ CGK+ +H++ E+
Sbjct: 3 SGSSGSGERPYGCNECGKNF--GRHSHLIEHLKRHFREKSSGP 43
Score = 39.8 bits (94), Expect = 2e-04
Identities = 10/31 (32%), Positives = 14/31 (45%)
Query: 1511 FECDFCKKKFYRNFDLQEHINTHTGNKPYQC 1541
+ C+ C K F R+ L EH+ H K
Sbjct: 13 YGCNECGKNFGRHSHLIEHLKRHFREKSSGP 43
Score = 38.7 bits (91), Expect = 6e-04
Identities = 11/38 (28%), Positives = 15/38 (39%)
Query: 895 IKTIERKFECDYCKMKFKSKSFLSEHINTHTGNKPYQC 932
+ ER + C+ C F S L EH+ H K
Sbjct: 6 SGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGP 43
Score = 36.3 bits (85), Expect = 0.003
Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Query: 1998 GERPYKCDVCGSSFKDKKHFSVHIRNH-GE 2026
GERPY C+ CG +F H H++ H E
Sbjct: 9 GERPYGCNECGKNFGRHSHLIEHLKRHFRE 38
Score = 35.6 bits (83), Expect = 0.005
Identities = 10/36 (27%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
Query: 1352 TGNK-FECIYCKKKYRRKFDLKEHINKHTGNKPYHC 1386
+G + + C C K + R L EH+ +H K
Sbjct: 8 SGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGP 43
Score = 34.4 bits (80), Expect = 0.018
Identities = 10/34 (29%), Positives = 17/34 (50%), Gaps = 4/34 (11%)
Query: 920 HINTHTGNKPYQCQICKKSFANKRSYQRDLKRHK 953
++ +G +PY C C K+F + S+ L H
Sbjct: 3 SGSSGSGERPYGCNECGKNF-GRHSH---LIEHL 32
Score = 33.6 bits (78), Expect = 0.025
Identities = 10/33 (30%), Positives = 13/33 (39%)
Query: 632 KKYECDSCNKKFWSKRALSEHMIIHTGIKEHQC 664
+ Y C+ C K F L EH+ H K
Sbjct: 11 RPYGCNECGKNFGRHSHLIEHLKRHFREKSSGP 43
Score = 32.5 bits (75), Expect = 0.078
Identities = 10/43 (23%), Positives = 14/43 (32%), Gaps = 2/43 (4%)
Query: 652 HMIIHTGIKEHQCHVCNTAFYHIRSLSRHLKIHEYNESKMYKC 694
+G + + C+ C F L HLK H K
Sbjct: 3 SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRH--FREKSSGP 43
Score = 30.6 bits (70), Expect = 0.32
Identities = 9/35 (25%), Positives = 15/35 (42%), Gaps = 2/35 (5%)
Query: 989 GDKCHICKVCGA--KIKGNLQKHMLSHTGEKPFCC 1021
G++ + C CG +L +H+ H EK
Sbjct: 9 GERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGP 43
Score = 30.2 bits (69), Expect = 0.57
Identities = 14/47 (29%), Positives = 18/47 (38%), Gaps = 7/47 (14%)
Query: 592 VHSSIKRYMCDICGKQFTTLSYLDLHRKSHNETVKRKEEDKKYECDS 638
S + Y C+ CGK F S+L H K H +K S
Sbjct: 6 SGSGERPYGCNECGKNFGRHSHLIEHLKRHF-------REKSSGPSS 45
Score = 28.6 bits (65), Expect = 1.9
Identities = 8/35 (22%), Positives = 14/35 (40%), Gaps = 2/35 (5%)
Query: 1946 GDKCHVCKVCGA--KIKGNMKRHMLSHTGEKPFCC 1978
G++ + C CG ++ H+ H EK
Sbjct: 9 GERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGP 43
Score = 27.9 bits (63), Expect = 3.5
Identities = 8/34 (23%), Positives = 13/34 (38%), Gaps = 4/34 (11%)
Query: 1374 HINKHTGNKPYHCQICKESFYTLKTYRGDLKRHE 1407
+ +G +PY C C ++F L H
Sbjct: 3 SGSSGSGERPYGCNECGKNF----GRHSHLIEHL 32
Score = 27.1 bits (61), Expect = 6.6
Identities = 11/29 (37%), Positives = 15/29 (51%), Gaps = 1/29 (3%)
Query: 390 SVHNGKERKFICDICGKQFTSNIHASRHK 418
S +G ER + C+ CGK F + H H
Sbjct: 5 SSGSG-ERPYGCNECGKNFGRHSHLIEHL 32
>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A
Length = 46
Score = 56.0 bits (136), Expect = 3e-10
Identities = 16/37 (43%), Positives = 19/37 (51%)
Query: 1040 HTGERPYKCDVCGSSFKDKWYLGVHMRKHNGEKPYNC 1076
TGE+ YKC+ CG F L H + H GEKP
Sbjct: 7 GTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGP 43
Score = 47.9 bits (115), Expect = 2e-07
Identities = 18/43 (41%), Positives = 21/43 (48%), Gaps = 3/43 (6%)
Query: 1008 KHMLSHTGEKPFCCHICGK--SLKGNLKDHILKCHTGERPYKC 1048
S TGEK + C+ CGK S L H K HTGE+P
Sbjct: 2 SSGSSGTGEKRYKCNECGKVFSRNSQLSQH-QKIHTGEKPSGP 43
Score = 41.0 bits (97), Expect = 7e-05
Identities = 15/42 (35%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Query: 1965 RHMLSHTGEKPFCCDICGK--SLKGNLKAHILRCQGERPYKC 2004
S TGEK + C+ CGK S L H GE+P
Sbjct: 2 SSGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGP 43
Score = 39.8 bits (94), Expect = 2e-04
Identities = 12/33 (36%), Positives = 16/33 (48%)
Query: 1064 HMRKHNGEKPYNCDYCGQTFAARSTFTFHLKKH 1096
GEK Y C+ CG+ F+ S + H K H
Sbjct: 3 SGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIH 35
Score = 37.5 bits (88), Expect = 0.001
Identities = 14/38 (36%), Positives = 20/38 (52%)
Query: 895 IKTIERKFECDYCKMKFKSKSFLSEHINTHTGNKPYQC 932
T E++++C+ C F S LS+H HTG KP
Sbjct: 6 SGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGP 43
Score = 37.1 bits (87), Expect = 0.002
Identities = 13/31 (41%), Positives = 17/31 (54%)
Query: 1511 FECDFCKKKFYRNFDLQEHINTHTGNKPYQC 1541
++C+ C K F RN L +H HTG KP
Sbjct: 13 YKCNECGKVFSRNSQLSQHQKIHTGEKPSGP 43
Score = 36.7 bits (86), Expect = 0.002
Identities = 10/35 (28%), Positives = 17/35 (48%), Gaps = 4/35 (11%)
Query: 1529 HINTHTGNKPYQCQICNKSFGTRRNYRLHLKRHKR 1563
++ TG K Y+C C K F + L +H++
Sbjct: 3 SGSSGTGEKRYKCNECGKVF----SRNSQLSQHQK 33
Score = 34.8 bits (81), Expect = 0.011
Identities = 13/30 (43%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Query: 1998 GERPYKCDVCGSSFKDKKHFSVHIRNH-GE 2026
GE+ YKC+ CG F S H + H GE
Sbjct: 9 GEKRYKCNECGKVFSRNSQLSQHQKIHTGE 38
Score = 34.8 bits (81), Expect = 0.013
Identities = 14/34 (41%), Positives = 18/34 (52%)
Query: 632 KKYECDSCNKKFWSKRALSEHMIIHTGIKEHQCH 665
K+Y+C+ C K F LS+H IHTG K
Sbjct: 11 KRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPS 44
Score = 34.0 bits (79), Expect = 0.022
Identities = 13/43 (30%), Positives = 17/43 (39%), Gaps = 2/43 (4%)
Query: 652 HMIIHTGIKEHQCHVCNTAFYHIRSLSRHLKIHEYNESKMYKC 694
TG K ++C+ C F LS+H KIH K
Sbjct: 3 SGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIH--TGEKPSGP 43
Score = 32.9 bits (76), Expect = 0.058
Identities = 14/36 (38%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Query: 1352 TGNK-FECIYCKKKYRRKFDLKEHINKHTGNKPYHC 1386
TG K ++C C K + R L +H HTG KP
Sbjct: 8 TGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGP 43
Score = 31.7 bits (73), Expect = 0.16
Identities = 8/23 (34%), Positives = 12/23 (52%)
Query: 920 HINTHTGNKPYQCQICKKSFANK 942
++ TG K Y+C C K F+
Sbjct: 3 SGSSGTGEKRYKCNECGKVFSRN 25
Score = 28.6 bits (65), Expect = 1.9
Identities = 13/36 (36%), Positives = 16/36 (44%), Gaps = 2/36 (5%)
Query: 989 GDKCHICKVCGA--KIKGNLQKHMLSHTGEKPFCCH 1022
G+K + C CG L +H HTGEKP
Sbjct: 9 GEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPS 44
Score = 27.9 bits (63), Expect = 3.6
Identities = 13/34 (38%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 588 HLRHVHSSIKRYMCDICGKQFTTLSYLDLHRKSH 621
+ KRY C+ CGK F+ S L H+K H
Sbjct: 3 SGS-SGTGEKRYKCNECGKVFSRNSQLSQHQKIH 35
Score = 26.7 bits (60), Expect = 9.4
Identities = 9/30 (30%), Positives = 15/30 (50%)
Query: 430 ECDYCKRKFTCKRYLAEHINAHTGNTIYGC 459
+C+ C + F+ L++H HTG G
Sbjct: 14 KCNECGKVFSRNSQLSQHQKIHTGEKPSGP 43
>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 56.0 bits (136), Expect = 3e-10
Identities = 15/37 (40%), Positives = 19/37 (51%)
Query: 1040 HTGERPYKCDVCGSSFKDKWYLGVHMRKHNGEKPYNC 1076
TGE P+ C CG F K L +H + H GE+P
Sbjct: 7 GTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGP 43
Score = 49.8 bits (120), Expect = 5e-08
Identities = 21/42 (50%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
Query: 1009 HMLSHTGEKPFCCHICGK--SLKGNLKDHILKCHTGERPYKC 1048
S TGE PF C CGK + K NL H K HTGERP
Sbjct: 3 SGSSGTGENPFICSECGKVFTHKTNLIIH-QKIHTGERPSGP 43
Score = 42.1 bits (100), Expect = 3e-05
Identities = 19/45 (42%), Positives = 20/45 (44%), Gaps = 10/45 (22%)
Query: 1966 HMLSHTGEKPFCCDICGK--SLKGNLKAHILRCQ----GERPYKC 2004
S TGE PF C CGK + K NL H Q GERP
Sbjct: 3 SGSSGTGENPFICSECGKVFTHKTNLIIH----QKIHTGERPSGP 43
Score = 41.3 bits (98), Expect = 5e-05
Identities = 11/35 (31%), Positives = 15/35 (42%)
Query: 1062 GVHMRKHNGEKPYNCDYCGQTFAARSTFTFHLKKH 1096
G GE P+ C CG+ F ++ H K H
Sbjct: 1 GSSGSSGTGENPFICSECGKVFTHKTNLIIHQKIH 35
Score = 37.5 bits (88), Expect = 0.001
Identities = 13/38 (34%), Positives = 15/38 (39%)
Query: 895 IKTIERKFECDYCKMKFKSKSFLSEHINTHTGNKPYQC 932
T E F C C F K+ L H HTG +P
Sbjct: 6 SGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGP 43
Score = 36.3 bits (85), Expect = 0.003
Identities = 11/31 (35%), Positives = 13/31 (41%)
Query: 1511 FECDFCKKKFYRNFDLQEHINTHTGNKPYQC 1541
F C C K F +L H HTG +P
Sbjct: 13 FICSECGKVFTHKTNLIIHQKIHTGERPSGP 43
Score = 36.3 bits (85), Expect = 0.003
Identities = 11/33 (33%), Positives = 16/33 (48%)
Query: 1529 HINTHTGNKPYQCQICNKSFGTRRNYRLHLKRH 1561
++ TG P+ C C K F + N +H K H
Sbjct: 3 SGSSGTGENPFICSECGKVFTHKTNLIIHQKIH 35
Score = 35.9 bits (84), Expect = 0.004
Identities = 12/30 (40%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Query: 1998 GERPYKCDVCGSSFKDKKHFSVHIRNH-GE 2026
GE P+ C CG F K + +H + H GE
Sbjct: 9 GENPFICSECGKVFTHKTNLIIHQKIHTGE 38
Score = 33.6 bits (78), Expect = 0.027
Identities = 8/23 (34%), Positives = 12/23 (52%)
Query: 920 HINTHTGNKPYQCQICKKSFANK 942
++ TG P+ C C K F +K
Sbjct: 3 SGSSGTGENPFICSECGKVFTHK 25
Score = 33.2 bits (77), Expect = 0.035
Identities = 13/36 (36%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
Query: 1352 TGNK-FECIYCKKKYRRKFDLKEHINKHTGNKPYHC 1386
TG F C C K + K +L H HTG +P
Sbjct: 8 TGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGP 43
Score = 32.9 bits (76), Expect = 0.057
Identities = 11/33 (33%), Positives = 13/33 (39%)
Query: 632 KKYECDSCNKKFWSKRALSEHMIIHTGIKEHQC 664
+ C C K F K L H IHTG +
Sbjct: 11 NPFICSECGKVFTHKTNLIIHQKIHTGERPSGP 43
Score = 32.5 bits (75), Expect = 0.073
Identities = 14/35 (40%), Positives = 16/35 (45%), Gaps = 2/35 (5%)
Query: 989 GDKCHICKVCGA--KIKGNLQKHMLSHTGEKPFCC 1021
G+ IC CG K NL H HTGE+P
Sbjct: 9 GENPFICSECGKVFTHKTNLIIHQKIHTGERPSGP 43
Score = 32.1 bits (74), Expect = 0.11
Identities = 11/33 (33%), Positives = 12/33 (36%)
Query: 652 HMIIHTGIKEHQCHVCNTAFYHIRSLSRHLKIH 684
TG C C F H +L H KIH
Sbjct: 3 SGSSGTGENPFICSECGKVFTHKTNLIIHQKIH 35
Score = 29.8 bits (68), Expect = 0.79
Identities = 12/35 (34%), Positives = 16/35 (45%), Gaps = 2/35 (5%)
Query: 1946 GDKCHVCKVCGA--KIKGNMKRHMLSHTGEKPFCC 1978
G+ +C CG K N+ H HTGE+P
Sbjct: 9 GENPFICSECGKVFTHKTNLIIHQKIHTGERPSGP 43
Score = 29.4 bits (67), Expect = 1.00
Identities = 10/30 (33%), Positives = 16/30 (53%)
Query: 592 VHSSIKRYMCDICGKQFTTLSYLDLHRKSH 621
+ ++C CGK FT + L +H+K H
Sbjct: 6 SGTGENPFICSECGKVFTHKTNLIIHQKIH 35
Score = 27.5 bits (62), Expect = 4.8
Identities = 9/33 (27%), Positives = 15/33 (45%), Gaps = 4/33 (12%)
Query: 1374 HINKHTGNKPYHCQICKESFYTLKTYRGDLKRH 1406
+ TG P+ C C + F T++ +L H
Sbjct: 3 SGSSGTGENPFICSECGKVF----THKTNLIIH 31
>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 56.0 bits (136), Expect = 3e-10
Identities = 14/37 (37%), Positives = 20/37 (54%)
Query: 1040 HTGERPYKCDVCGSSFKDKWYLGVHMRKHNGEKPYNC 1076
TG + ++C CG +F K L +H + H GEKP
Sbjct: 7 GTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGP 43
Score = 47.5 bits (114), Expect = 3e-07
Identities = 18/42 (42%), Positives = 20/42 (47%), Gaps = 3/42 (7%)
Query: 1009 HMLSHTGEKPFCCHICGK--SLKGNLKDHILKCHTGERPYKC 1048
S TG K F C CGK + K L H K HTGE+P
Sbjct: 3 SGSSGTGGKHFECTECGKAFTRKSTLSMH-QKIHTGEKPSGP 43
Score = 41.4 bits (98), Expect = 5e-05
Identities = 12/35 (34%), Positives = 16/35 (45%)
Query: 1062 GVHMRKHNGEKPYNCDYCGQTFAARSTFTFHLKKH 1096
G G K + C CG+ F +ST + H K H
Sbjct: 1 GSSGSSGTGGKHFECTECGKAFTRKSTLSMHQKIH 35
Score = 40.6 bits (96), Expect = 1e-04
Identities = 15/42 (35%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Query: 1965 RHMLSHTGEKPFCCDICGK--SLKGNLKAHILRCQGERPYKC 2004
S TG K F C CGK + K L H GE+P
Sbjct: 2 SSGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGP 43
Score = 39.4 bits (93), Expect = 2e-04
Identities = 16/38 (42%), Positives = 17/38 (44%)
Query: 895 IKTIERKFECDYCKMKFKSKSFLSEHINTHTGNKPYQC 932
T + FEC C F KS LS H HTG KP
Sbjct: 6 SGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGP 43
Score = 37.1 bits (87), Expect = 0.002
Identities = 14/31 (45%), Positives = 14/31 (45%)
Query: 1511 FECDFCKKKFYRNFDLQEHINTHTGNKPYQC 1541
FEC C K F R L H HTG KP
Sbjct: 13 FECTECGKAFTRKSTLSMHQKIHTGEKPSGP 43
Score = 36.0 bits (84), Expect = 0.005
Identities = 11/30 (36%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Query: 1998 GERPYKCDVCGSSFKDKKHFSVHIRNH-GE 2026
G + ++C CG +F K S+H + H GE
Sbjct: 9 GGKHFECTECGKAFTRKSTLSMHQKIHTGE 38
Score = 35.6 bits (83), Expect = 0.006
Identities = 17/36 (47%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Query: 1352 TGNK-FECIYCKKKYRRKFDLKEHINKHTGNKPYHC 1386
TG K FEC C K + RK L H HTG KP
Sbjct: 8 TGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGP 43
Score = 35.2 bits (82), Expect = 0.009
Identities = 9/35 (25%), Positives = 17/35 (48%), Gaps = 4/35 (11%)
Query: 1529 HINTHTGNKPYQCQICNKSFGTRRNYRLHLKRHKR 1563
++ TG K ++C C K+F + L H++
Sbjct: 3 SGSSGTGGKHFECTECGKAF----TRKSTLSMHQK 33
Score = 34.8 bits (81), Expect = 0.012
Identities = 15/33 (45%), Positives = 16/33 (48%)
Query: 632 KKYECDSCNKKFWSKRALSEHMIIHTGIKEHQC 664
K +EC C K F K LS H IHTG K
Sbjct: 11 KHFECTECGKAFTRKSTLSMHQKIHTGEKPSGP 43
Score = 33.6 bits (78), Expect = 0.027
Identities = 8/25 (32%), Positives = 13/25 (52%)
Query: 918 SEHINTHTGNKPYQCQICKKSFANK 942
++ TG K ++C C K+F K
Sbjct: 1 GSSGSSGTGGKHFECTECGKAFTRK 25
Score = 33.6 bits (78), Expect = 0.032
Identities = 13/35 (37%), Positives = 15/35 (42%)
Query: 650 SEHMIIHTGIKEHQCHVCNTAFYHIRSLSRHLKIH 684
TG K +C C AF +LS H KIH
Sbjct: 1 GSSGSSGTGGKHFECTECGKAFTRKSTLSMHQKIH 35
Score = 29.4 bits (67), Expect = 0.90
Identities = 14/35 (40%), Positives = 14/35 (40%), Gaps = 2/35 (5%)
Query: 989 GDKCHICKVCGA--KIKGNLQKHMLSHTGEKPFCC 1021
G K C CG K L H HTGEKP
Sbjct: 9 GGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGP 43
Score = 28.3 bits (64), Expect = 2.6
Identities = 12/30 (40%), Positives = 16/30 (53%)
Query: 592 VHSSIKRYMCDICGKQFTTLSYLDLHRKSH 621
+ K + C CGK FT S L +H+K H
Sbjct: 6 SGTGGKHFECTECGKAFTRKSTLSMHQKIH 35
Score = 27.5 bits (62), Expect = 4.6
Identities = 12/30 (40%), Positives = 14/30 (46%)
Query: 430 ECDYCKRKFTCKRYLAEHINAHTGNTIYGC 459
EC C + FT K L+ H HTG G
Sbjct: 14 ECTECGKAFTRKSTLSMHQKIHTGEKPSGP 43
Score = 27.5 bits (62), Expect = 5.1
Identities = 13/35 (37%), Positives = 14/35 (40%), Gaps = 2/35 (5%)
Query: 1946 GDKCHVCKVCGA--KIKGNMKRHMLSHTGEKPFCC 1978
G K C CG K + H HTGEKP
Sbjct: 9 GGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGP 43
>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 56.0 bits (136), Expect = 3e-10
Identities = 16/37 (43%), Positives = 20/37 (54%)
Query: 1040 HTGERPYKCDVCGSSFKDKWYLGVHMRKHNGEKPYNC 1076
TGE+PYKC CG +F D H R H G++P
Sbjct: 7 GTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGP 43
Score = 46.0 bits (110), Expect = 1e-06
Identities = 16/42 (38%), Positives = 20/42 (47%), Gaps = 3/42 (7%)
Query: 1009 HMLSHTGEKPFCCHICGK--SLKGNLKDHILKCHTGERPYKC 1048
S TGEKP+ C CGK + H + HTG+RP
Sbjct: 3 SGSSGTGEKPYKCMECGKAFGDNSSCTQH-QRLHTGQRPSGP 43
Score = 41.0 bits (97), Expect = 6e-05
Identities = 14/35 (40%), Positives = 17/35 (48%)
Query: 1062 GVHMRKHNGEKPYNCDYCGQTFAARSTFTFHLKKH 1096
G GEKPY C CG+ F S+ T H + H
Sbjct: 1 GSSGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLH 35
Score = 39.1 bits (92), Expect = 4e-04
Identities = 14/41 (34%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 1966 HMLSHTGEKPFCCDICGK--SLKGNLKAHILRCQGERPYKC 2004
S TGEKP+ C CGK + H G+RP
Sbjct: 3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGP 43
Score = 37.2 bits (87), Expect = 0.002
Identities = 11/38 (28%), Positives = 17/38 (44%)
Query: 895 IKTIERKFECDYCKMKFKSKSFLSEHINTHTGNKPYQC 932
T E+ ++C C F S ++H HTG +P
Sbjct: 6 SGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGP 43
Score = 36.8 bits (86), Expect = 0.002
Identities = 11/35 (31%), Positives = 17/35 (48%), Gaps = 4/35 (11%)
Query: 1529 HINTHTGNKPYQCQICNKSFGTRRNYRLHLKRHKR 1563
++ TG KPY+C C K+F +H+R
Sbjct: 3 SGSSGTGEKPYKCMECGKAF----GDNSSCTQHQR 33
Score = 36.4 bits (85), Expect = 0.003
Identities = 11/38 (28%), Positives = 17/38 (44%)
Query: 1504 IKTIQRKFECDFCKKKFYRNFDLQEHINTHTGNKPYQC 1541
T ++ ++C C K F N +H HTG +P
Sbjct: 6 SGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGP 43
Score = 34.9 bits (81), Expect = 0.010
Identities = 14/30 (46%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Query: 1998 GERPYKCDVCGSSFKDKKHFSVHIRNH-GE 2026
GE+PYKC CG +F D + H R H G+
Sbjct: 9 GEKPYKCMECGKAFGDNSSCTQHQRLHTGQ 38
Score = 34.5 bits (80), Expect = 0.013
Identities = 10/33 (30%), Positives = 16/33 (48%)
Query: 632 KKYECDSCNKKFWSKRALSEHMIIHTGIKEHQC 664
K Y+C C K F + ++H +HTG +
Sbjct: 11 KPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGP 43
Score = 34.1 bits (79), Expect = 0.024
Identities = 10/43 (23%), Positives = 17/43 (39%), Gaps = 2/43 (4%)
Query: 652 HMIIHTGIKEHQCHVCNTAFYHIRSLSRHLKIHEYNESKMYKC 694
TG K ++C C AF S ++H ++H +
Sbjct: 3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLH--TGQRPSGP 43
Score = 32.6 bits (75), Expect = 0.070
Identities = 11/36 (30%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Query: 1352 TGNK-FECIYCKKKYRRKFDLKEHINKHTGNKPYHC 1386
TG K ++C+ C K + +H HTG +P
Sbjct: 8 TGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGP 43
Score = 31.8 bits (73), Expect = 0.15
Identities = 9/23 (39%), Positives = 14/23 (60%)
Query: 920 HINTHTGNKPYQCQICKKSFANK 942
++ TG KPY+C C K+F +
Sbjct: 3 SGSSGTGEKPYKCMECGKAFGDN 25
Score = 28.3 bits (64), Expect = 2.2
Identities = 10/35 (28%), Positives = 16/35 (45%), Gaps = 2/35 (5%)
Query: 989 GDKCHICKVCGA--KIKGNLQKHMLSHTGEKPFCC 1021
G+K + C CG + +H HTG++P
Sbjct: 9 GEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGP 43
Score = 27.9 bits (63), Expect = 3.4
Identities = 10/34 (29%), Positives = 13/34 (38%), Gaps = 1/34 (2%)
Query: 588 HLRHVHSSIKRYMCDICGKQFTTLSYLDLHRKSH 621
+ K Y C CGK F S H++ H
Sbjct: 3 SGS-SGTGEKPYKCMECGKAFGDNSSCTQHQRLH 35
>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national
project on protein structural and functional analyses;
NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 56.0 bits (136), Expect = 4e-10
Identities = 17/37 (45%), Positives = 21/37 (56%)
Query: 1040 HTGERPYKCDVCGSSFKDKWYLGVHMRKHNGEKPYNC 1076
TGE+PYKC+ CG +F+ L H H GEKP
Sbjct: 7 GTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGP 43
Score = 47.5 bits (114), Expect = 4e-07
Identities = 18/42 (42%), Positives = 21/42 (50%), Gaps = 3/42 (7%)
Query: 1009 HMLSHTGEKPFCCHICGK--SLKGNLKDHILKCHTGERPYKC 1048
S TGEKP+ C+ CGK NL H HTGE+P
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRAHSNLTTH-QVIHTGEKPSGP 43
Score = 42.1 bits (100), Expect = 3e-05
Identities = 15/35 (42%), Positives = 17/35 (48%)
Query: 1062 GVHMRKHNGEKPYNCDYCGQTFAARSTFTFHLKKH 1096
G GEKPY C+ CG+ F A S T H H
Sbjct: 1 GSSGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIH 35
Score = 40.2 bits (95), Expect = 1e-04
Identities = 16/41 (39%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Query: 1966 HMLSHTGEKPFCCDICGK--SLKGNLKAHILRCQGERPYKC 2004
S TGEKP+ C+ CGK NL H + GE+P
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGP 43
Score = 37.9 bits (89), Expect = 0.001
Identities = 11/35 (31%), Positives = 17/35 (48%), Gaps = 4/35 (11%)
Query: 1529 HINTHTGNKPYQCQICNKSFGTRRNYRLHLKRHKR 1563
++ TG KPY+C C K+F +L H+
Sbjct: 3 SGSSGTGEKPYKCNECGKAF----RAHSNLTTHQV 33
Score = 37.5 bits (88), Expect = 0.001
Identities = 13/38 (34%), Positives = 20/38 (52%)
Query: 895 IKTIERKFECDYCKMKFKSKSFLSEHINTHTGNKPYQC 932
T E+ ++C+ C F++ S L+ H HTG KP
Sbjct: 6 SGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGP 43
Score = 36.0 bits (84), Expect = 0.004
Identities = 11/31 (35%), Positives = 16/31 (51%)
Query: 1511 FECDFCKKKFYRNFDLQEHINTHTGNKPYQC 1541
++C+ C K F + +L H HTG KP
Sbjct: 13 YKCNECGKAFRAHSNLTTHQVIHTGEKPSGP 43
Score = 36.0 bits (84), Expect = 0.005
Identities = 13/30 (43%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Query: 1998 GERPYKCDVCGSSFKDKKHFSVHIRNH-GE 2026
GE+PYKC+ CG +F+ + + H H GE
Sbjct: 9 GEKPYKCNECGKAFRAHSNLTTHQVIHTGE 38
Score = 34.8 bits (81), Expect = 0.010
Identities = 13/33 (39%), Positives = 18/33 (54%)
Query: 632 KKYECDSCNKKFWSKRALSEHMIIHTGIKEHQC 664
K Y+C+ C K F + L+ H +IHTG K
Sbjct: 11 KPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGP 43
Score = 34.0 bits (79), Expect = 0.019
Identities = 13/45 (28%), Positives = 18/45 (40%), Gaps = 6/45 (13%)
Query: 652 HMIIHTGIKEHQCHVCNTAFYHIRSLSRHLKIH--EYNESKMYKC 694
TG K ++C+ C AF +L+ H IH E K
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGE----KPSGP 43
Score = 32.9 bits (76), Expect = 0.055
Identities = 14/36 (38%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Query: 1352 TGNK-FECIYCKKKYRRKFDLKEHINKHTGNKPYHC 1386
TG K ++C C K +R +L H HTG KP
Sbjct: 8 TGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGP 43
Score = 31.7 bits (73), Expect = 0.14
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 920 HINTHTGNKPYQCQICKKSFANK 942
++ TG KPY+C C K+F
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRAH 25
Score = 29.8 bits (68), Expect = 0.60
Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
Query: 989 GDKCHICKVCGA--KIKGNLQKHMLSHTGEKPFCC 1021
G+K + C CG + NL H + HTGEKP
Sbjct: 9 GEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGP 43
Score = 27.9 bits (63), Expect = 3.7
Identities = 11/34 (32%), Positives = 14/34 (41%), Gaps = 1/34 (2%)
Query: 588 HLRHVHSSIKRYMCDICGKQFTTLSYLDLHRKSH 621
+ K Y C+ CGK F S L H+ H
Sbjct: 3 SGS-SGTGEKPYKCNECGKAFRAHSNLTTHQVIH 35
Score = 27.1 bits (61), Expect = 6.3
Identities = 13/35 (37%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
Query: 1946 GDKCHVCKVCGA--KIKGNMKRHMLSHTGEKPFCC 1978
G+K + C CG + N+ H + HTGEKP
Sbjct: 9 GEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGP 43
>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 56.0 bits (136), Expect = 4e-10
Identities = 18/37 (48%), Positives = 21/37 (56%)
Query: 1040 HTGERPYKCDVCGSSFKDKWYLGVHMRKHNGEKPYNC 1076
TGE+PY+C CG +F K L H R H GEKP
Sbjct: 7 GTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGP 43
Score = 47.5 bits (114), Expect = 4e-07
Identities = 19/42 (45%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Query: 1009 HMLSHTGEKPFCCHICGK--SLKGNLKDHILKCHTGERPYKC 1048
S TGEKP+ C CGK + K NL H + HTGE+P
Sbjct: 3 SGSSGTGEKPYRCGECGKAFAQKANLTQH-QRIHTGEKPSGP 43
Score = 41.7 bits (99), Expect = 4e-05
Identities = 17/42 (40%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Query: 1965 RHMLSHTGEKPFCCDICGK--SLKGNLKAHILRCQGERPYKC 2004
S TGEKP+ C CGK + K NL H GE+P
Sbjct: 2 SSGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGP 43
Score = 40.6 bits (96), Expect = 1e-04
Identities = 14/35 (40%), Positives = 18/35 (51%)
Query: 1062 GVHMRKHNGEKPYNCDYCGQTFAARSTFTFHLKKH 1096
G GEKPY C CG+ FA ++ T H + H
Sbjct: 1 GSSGSSGTGEKPYRCGECGKAFAQKANLTQHQRIH 35
Score = 37.9 bits (89), Expect = 0.001
Identities = 13/38 (34%), Positives = 18/38 (47%)
Query: 895 IKTIERKFECDYCKMKFKSKSFLSEHINTHTGNKPYQC 932
T E+ + C C F K+ L++H HTG KP
Sbjct: 6 SGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGP 43
Score = 37.1 bits (87), Expect = 0.002
Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 4/35 (11%)
Query: 1529 HINTHTGNKPYQCQICNKSFGTRRNYRLHLKRHKR 1563
++ TG KPY+C C K+F + +L +H+R
Sbjct: 3 SGSSGTGEKPYRCGECGKAF----AQKANLTQHQR 33
Score = 36.3 bits (85), Expect = 0.003
Identities = 11/31 (35%), Positives = 15/31 (48%)
Query: 1511 FECDFCKKKFYRNFDLQEHINTHTGNKPYQC 1541
+ C C K F + +L +H HTG KP
Sbjct: 13 YRCGECGKAFAQKANLTQHQRIHTGEKPSGP 43
Score = 35.9 bits (84), Expect = 0.005
Identities = 14/30 (46%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Query: 1998 GERPYKCDVCGSSFKDKKHFSVHIRNH-GE 2026
GE+PY+C CG +F K + + H R H GE
Sbjct: 9 GEKPYRCGECGKAFAQKANLTQHQRIHTGE 38
Score = 34.0 bits (79), Expect = 0.019
Identities = 14/33 (42%), Positives = 16/33 (48%)
Query: 632 KKYECDSCNKKFWSKRALSEHMIIHTGIKEHQC 664
K Y C C K F K L++H IHTG K
Sbjct: 11 KPYRCGECGKAFAQKANLTQHQRIHTGEKPSGP 43
Score = 33.2 bits (77), Expect = 0.039
Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Query: 1352 TGNK-FECIYCKKKYRRKFDLKEHINKHTGNKPYHC 1386
TG K + C C K + +K +L +H HTG KP
Sbjct: 8 TGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGP 43
Score = 32.1 bits (74), Expect = 0.090
Identities = 13/45 (28%), Positives = 19/45 (42%), Gaps = 6/45 (13%)
Query: 652 HMIIHTGIKEHQCHVCNTAFYHIRSLSRHLKIH--EYNESKMYKC 694
TG K ++C C AF +L++H +IH E K
Sbjct: 3 SGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGE----KPSGP 43
Score = 32.1 bits (74), Expect = 0.091
Identities = 11/23 (47%), Positives = 15/23 (65%)
Query: 920 HINTHTGNKPYQCQICKKSFANK 942
++ TG KPY+C C K+FA K
Sbjct: 3 SGSSGTGEKPYRCGECGKAFAQK 25
Score = 30.2 bits (69), Expect = 0.47
Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
Query: 989 GDKCHICKVCGA--KIKGNLQKHMLSHTGEKPFCC 1021
G+K + C CG K NL +H HTGEKP
Sbjct: 9 GEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGP 43
Score = 27.9 bits (63), Expect = 3.2
Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
Query: 1946 GDKCHVCKVCGA--KIKGNMKRHMLSHTGEKPFCC 1978
G+K + C CG K N+ +H HTGEKP
Sbjct: 9 GEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGP 43
Score = 27.9 bits (63), Expect = 3.9
Identities = 10/34 (29%), Positives = 14/34 (41%), Gaps = 1/34 (2%)
Query: 588 HLRHVHSSIKRYMCDICGKQFTTLSYLDLHRKSH 621
+ K Y C CGK F + L H++ H
Sbjct: 3 SGS-SGTGEKPYRCGECGKAFAQKANLTQHQRIH 35
>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 56.0 bits (136), Expect = 4e-10
Identities = 17/37 (45%), Positives = 20/37 (54%)
Query: 1040 HTGERPYKCDVCGSSFKDKWYLGVHMRKHNGEKPYNC 1076
TGE+P++C CG SF L VH R H GE P
Sbjct: 7 GTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGP 43
Score = 47.1 bits (113), Expect = 5e-07
Identities = 18/43 (41%), Positives = 19/43 (44%), Gaps = 3/43 (6%)
Query: 1008 KHMLSHTGEKPFCCHICGK--SLKGNLKDHILKCHTGERPYKC 1048
S TGEKP C CGK S L H + HTGE P
Sbjct: 2 SSGSSGTGEKPHECRECGKSFSFNSQLIVHQ-RIHTGENPSGP 43
Score = 41.0 bits (97), Expect = 6e-05
Identities = 16/42 (38%), Positives = 16/42 (38%), Gaps = 2/42 (4%)
Query: 1965 RHMLSHTGEKPFCCDICGK--SLKGNLKAHILRCQGERPYKC 2004
S TGEKP C CGK S L H GE P
Sbjct: 2 SSGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGP 43
Score = 41.0 bits (97), Expect = 7e-05
Identities = 12/35 (34%), Positives = 17/35 (48%)
Query: 1062 GVHMRKHNGEKPYNCDYCGQTFAARSTFTFHLKKH 1096
G GEKP+ C CG++F+ S H + H
Sbjct: 1 GSSGSSGTGEKPHECRECGKSFSFNSQLIVHQRIH 35
Score = 37.5 bits (88), Expect = 0.001
Identities = 13/38 (34%), Positives = 14/38 (36%)
Query: 895 IKTIERKFECDYCKMKFKSKSFLSEHINTHTGNKPYQC 932
T E+ EC C F S L H HTG P
Sbjct: 6 SGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGP 43
Score = 36.4 bits (85), Expect = 0.003
Identities = 12/31 (38%), Positives = 12/31 (38%)
Query: 1511 FECDFCKKKFYRNFDLQEHINTHTGNKPYQC 1541
EC C K F N L H HTG P
Sbjct: 13 HECRECGKSFSFNSQLIVHQRIHTGENPSGP 43
Score = 35.6 bits (83), Expect = 0.007
Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 4/35 (11%)
Query: 1529 HINTHTGNKPYQCQICNKSFGTRRNYRLHLKRHKR 1563
++ TG KP++C+ C KSF ++ L H+R
Sbjct: 3 SGSSGTGEKPHECRECGKSF----SFNSQLIVHQR 33
Score = 34.8 bits (81), Expect = 0.011
Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Query: 1998 GERPYKCDVCGSSFKDKKHFSVHIRNH-GE 2026
GE+P++C CG SF VH R H GE
Sbjct: 9 GEKPHECRECGKSFSFNSQLIVHQRIHTGE 38
Score = 33.7 bits (78), Expect = 0.032
Identities = 12/33 (36%), Positives = 13/33 (39%)
Query: 632 KKYECDSCNKKFWSKRALSEHMIIHTGIKEHQC 664
K +EC C K F L H IHTG
Sbjct: 11 KPHECRECGKSFSFNSQLIVHQRIHTGENPSGP 43
Score = 33.3 bits (77), Expect = 0.045
Identities = 13/36 (36%), Positives = 14/36 (38%), Gaps = 1/36 (2%)
Query: 1352 TGNK-FECIYCKKKYRRKFDLKEHINKHTGNKPYHC 1386
TG K EC C K + L H HTG P
Sbjct: 8 TGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGP 43
Score = 32.5 bits (75), Expect = 0.072
Identities = 11/33 (33%), Positives = 14/33 (42%)
Query: 652 HMIIHTGIKEHQCHVCNTAFYHIRSLSRHLKIH 684
TG K H+C C +F L H +IH
Sbjct: 3 SGSSGTGEKPHECRECGKSFSFNSQLIVHQRIH 35
Score = 32.5 bits (75), Expect = 0.086
Identities = 9/23 (39%), Positives = 15/23 (65%)
Query: 920 HINTHTGNKPYQCQICKKSFANK 942
++ TG KP++C+ C KSF+
Sbjct: 3 SGSSGTGEKPHECRECGKSFSFN 25
Score = 29.0 bits (66), Expect = 1.4
Identities = 13/35 (37%), Positives = 15/35 (42%), Gaps = 2/35 (5%)
Query: 989 GDKCHICKVCGA--KIKGNLQKHMLSHTGEKPFCC 1021
G+K H C+ CG L H HTGE P
Sbjct: 9 GEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGP 43
Score = 27.9 bits (63), Expect = 3.6
Identities = 10/30 (33%), Positives = 12/30 (40%)
Query: 430 ECDYCKRKFTCKRYLAEHINAHTGNTIYGC 459
EC C + F+ L H HTG G
Sbjct: 14 ECRECGKSFSFNSQLIVHQRIHTGENPSGP 43
Score = 27.5 bits (62), Expect = 4.5
Identities = 10/34 (29%), Positives = 16/34 (47%), Gaps = 2/34 (5%)
Query: 590 RH--VHSSIKRYMCDICGKQFTTLSYLDLHRKSH 621
+ K + C CGK F+ S L +H++ H
Sbjct: 2 SSGSSGTGEKPHECRECGKSFSFNSQLIVHQRIH 35
>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 56.0 bits (136), Expect = 4e-10
Identities = 15/37 (40%), Positives = 18/37 (48%)
Query: 1040 HTGERPYKCDVCGSSFKDKWYLGVHMRKHNGEKPYNC 1076
TG +PY C+ CG +F L H H GEKP
Sbjct: 7 GTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGP 43
Score = 47.1 bits (113), Expect = 5e-07
Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
Query: 1008 KHMLSHTGEKPFCCHICGK--SLKGNLKDHILKCHTGERPYKC 1048
S TG KP+ C+ CGK S+ +L H HTGE+P
Sbjct: 2 SSGSSGTGVKPYMCNECGKAFSVYSSLTTH-QVIHTGEKPSGP 43
Score = 42.1 bits (100), Expect = 3e-05
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Query: 1965 RHMLSHTGEKPFCCDICGK--SLKGNLKAHILRCQGERPYKC 2004
S TG KP+ C+ CGK S+ +L H + GE+P
Sbjct: 2 SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGP 43
Score = 41.4 bits (98), Expect = 6e-05
Identities = 12/33 (36%), Positives = 16/33 (48%)
Query: 1064 HMRKHNGEKPYNCDYCGQTFAARSTFTFHLKKH 1096
G KPY C+ CG+ F+ S+ T H H
Sbjct: 3 SGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIH 35
Score = 37.1 bits (87), Expect = 0.002
Identities = 12/38 (31%), Positives = 16/38 (42%)
Query: 895 IKTIERKFECDYCKMKFKSKSFLSEHINTHTGNKPYQC 932
T + + C+ C F S L+ H HTG KP
Sbjct: 6 SGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGP 43
Score = 36.7 bits (86), Expect = 0.003
Identities = 11/35 (31%), Positives = 16/35 (45%), Gaps = 4/35 (11%)
Query: 1529 HINTHTGNKPYQCQICNKSFGTRRNYRLHLKRHKR 1563
++ TG KPY C C K+F + L H+
Sbjct: 3 SGSSGTGVKPYMCNECGKAF----SVYSSLTTHQV 33
Score = 35.6 bits (83), Expect = 0.006
Identities = 11/31 (35%), Positives = 13/31 (41%)
Query: 1511 FECDFCKKKFYRNFDLQEHINTHTGNKPYQC 1541
+ C+ C K F L H HTG KP
Sbjct: 13 YMCNECGKAFSVYSSLTTHQVIHTGEKPSGP 43
Score = 35.2 bits (82), Expect = 0.009
Identities = 13/33 (39%), Positives = 17/33 (51%)
Query: 632 KKYECDSCNKKFWSKRALSEHMIIHTGIKEHQC 664
K Y C+ C K F +L+ H +IHTG K
Sbjct: 11 KPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGP 43
Score = 35.2 bits (82), Expect = 0.009
Identities = 11/30 (36%), Positives = 15/30 (50%), Gaps = 1/30 (3%)
Query: 1998 GERPYKCDVCGSSFKDKKHFSVHIRNH-GE 2026
G +PY C+ CG +F + H H GE
Sbjct: 9 GVKPYMCNECGKAFSVYSSLTTHQVIHTGE 38
Score = 33.6 bits (78), Expect = 0.028
Identities = 14/45 (31%), Positives = 18/45 (40%), Gaps = 6/45 (13%)
Query: 652 HMIIHTGIKEHQCHVCNTAFYHIRSLSRHLKIH--EYNESKMYKC 694
TG+K + C+ C AF SL+ H IH E K
Sbjct: 3 SGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGE----KPSGP 43
Score = 32.5 bits (75), Expect = 0.072
Identities = 13/36 (36%), Positives = 15/36 (41%), Gaps = 1/36 (2%)
Query: 1352 TGNK-FECIYCKKKYRRKFDLKEHINKHTGNKPYHC 1386
TG K + C C K + L H HTG KP
Sbjct: 8 TGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGP 43
Score = 31.7 bits (73), Expect = 0.14
Identities = 12/34 (35%), Positives = 16/34 (47%), Gaps = 4/34 (11%)
Query: 920 HINTHTGNKPYQCQICKKSFANKRSYQRDLKRHK 953
++ TG KPY C C K+F S L H+
Sbjct: 3 SGSSGTGVKPYMCNECGKAF----SVYSSLTTHQ 32
Score = 29.0 bits (66), Expect = 1.1
Identities = 13/35 (37%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
Query: 989 GDKCHICKVCGA--KIKGNLQKHMLSHTGEKPFCC 1021
G K ++C CG + +L H + HTGEKP
Sbjct: 9 GVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGP 43
Score = 27.9 bits (63), Expect = 3.4
Identities = 12/34 (35%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 588 HLRHVHSSIKRYMCDICGKQFTTLSYLDLHRKSH 621
+ +K YMC+ CGK F+ S L H+ H
Sbjct: 3 SGS-SGTGVKPYMCNECGKAFSVYSSLTTHQVIH 35
>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 56.0 bits (136), Expect = 4e-10
Identities = 17/37 (45%), Positives = 20/37 (54%)
Query: 1040 HTGERPYKCDVCGSSFKDKWYLGVHMRKHNGEKPYNC 1076
TGE+PY C+ CG +F L H R H GEKP
Sbjct: 7 GTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGP 43
Score = 47.5 bits (114), Expect = 4e-07
Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
Query: 1008 KHMLSHTGEKPFCCHICGK--SLKGNLKDHILKCHTGERPYKC 1048
S TGEKP+ C CGK L++H + HTGE+P
Sbjct: 2 SSGSSGTGEKPYNCEECGKAFIHDSQLQEHQ-RIHTGEKPSGP 43
Score = 42.1 bits (100), Expect = 3e-05
Identities = 14/35 (40%), Positives = 17/35 (48%)
Query: 1062 GVHMRKHNGEKPYNCDYCGQTFAARSTFTFHLKKH 1096
G GEKPYNC+ CG+ F S H + H
Sbjct: 1 GSSGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIH 35
Score = 41.4 bits (98), Expect = 6e-05
Identities = 15/42 (35%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Query: 1965 RHMLSHTGEKPFCCDICGK--SLKGNLKAHILRCQGERPYKC 2004
S TGEKP+ C+ CGK L+ H GE+P
Sbjct: 2 SSGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGP 43
Score = 37.9 bits (89), Expect = 0.001
Identities = 14/38 (36%), Positives = 17/38 (44%)
Query: 895 IKTIERKFECDYCKMKFKSKSFLSEHINTHTGNKPYQC 932
T E+ + C+ C F S L EH HTG KP
Sbjct: 6 SGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGP 43
Score = 37.5 bits (88), Expect = 0.001
Identities = 12/35 (34%), Positives = 19/35 (54%), Gaps = 4/35 (11%)
Query: 1529 HINTHTGNKPYQCQICNKSFGTRRNYRLHLKRHKR 1563
++ TG KPY C+ C K+F + L+ H+R
Sbjct: 3 SGSSGTGEKPYNCEECGKAF----IHDSQLQEHQR 33
Score = 37.1 bits (87), Expect = 0.002
Identities = 13/31 (41%), Positives = 16/31 (51%)
Query: 1511 FECDFCKKKFYRNFDLQEHINTHTGNKPYQC 1541
+ C+ C K F + LQEH HTG KP
Sbjct: 13 YNCEECGKAFIHDSQLQEHQRIHTGEKPSGP 43
Score = 35.6 bits (83), Expect = 0.006
Identities = 13/30 (43%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Query: 1998 GERPYKCDVCGSSFKDKKHFSVHIRNH-GE 2026
GE+PY C+ CG +F H R H GE
Sbjct: 9 GEKPYNCEECGKAFIHDSQLQEHQRIHTGE 38
Score = 34.8 bits (81), Expect = 0.011
Identities = 14/45 (31%), Positives = 16/45 (35%), Gaps = 6/45 (13%)
Query: 652 HMIIHTGIKEHQCHVCNTAFYHIRSLSRHLKIH--EYNESKMYKC 694
TG K + C C AF H L H +IH E K
Sbjct: 3 SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGE----KPSGP 43
Score = 34.4 bits (80), Expect = 0.015
Identities = 14/33 (42%), Positives = 15/33 (45%)
Query: 632 KKYECDSCNKKFWSKRALSEHMIIHTGIKEHQC 664
K Y C+ C K F L EH IHTG K
Sbjct: 11 KPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGP 43
Score = 33.7 bits (78), Expect = 0.032
Identities = 14/36 (38%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Query: 1352 TGNK-FECIYCKKKYRRKFDLKEHINKHTGNKPYHC 1386
TG K + C C K + L+EH HTG KP
Sbjct: 8 TGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGP 43
Score = 31.7 bits (73), Expect = 0.13
Identities = 11/34 (32%), Positives = 18/34 (52%), Gaps = 4/34 (11%)
Query: 920 HINTHTGNKPYQCQICKKSFANKRSYQRDLKRHK 953
++ TG KPY C+ C K+F + L+ H+
Sbjct: 3 SGSSGTGEKPYNCEECGKAF----IHDSQLQEHQ 32
Score = 29.4 bits (67), Expect = 0.82
Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
Query: 989 GDKCHICKVCGA--KIKGNLQKHMLSHTGEKPFCC 1021
G+K + C+ CG LQ+H HTGEKP
Sbjct: 9 GEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGP 43
Score = 28.3 bits (64), Expect = 2.5
Identities = 11/34 (32%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
Query: 588 HLRHVHSSIKRYMCDICGKQFTTLSYLDLHRKSH 621
+ K Y C+ CGK F S L H++ H
Sbjct: 3 SGS-SGTGEKPYNCEECGKAFIHDSQLQEHQRIH 35
Score = 27.1 bits (61), Expect = 7.1
Identities = 12/35 (34%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
Query: 1946 GDKCHVCKVCGA--KIKGNMKRHMLSHTGEKPFCC 1978
G+K + C+ CG ++ H HTGEKP
Sbjct: 9 GEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGP 43
Score = 26.7 bits (60), Expect = 9.4
Identities = 10/33 (30%), Positives = 17/33 (51%), Gaps = 4/33 (12%)
Query: 1374 HINKHTGNKPYHCQICKESFYTLKTYRGDLKRH 1406
+ TG KPY+C+ C ++F + L+ H
Sbjct: 3 SGSSGTGEKPYNCEECGKAF----IHDSQLQEH 31
>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 56.0 bits (136), Expect = 4e-10
Identities = 16/37 (43%), Positives = 20/37 (54%)
Query: 1040 HTGERPYKCDVCGSSFKDKWYLGVHMRKHNGEKPYNC 1076
+GE+P+KC+ CG F L H R H GEKP
Sbjct: 7 GSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGP 43
Score = 48.7 bits (117), Expect = 2e-07
Identities = 17/42 (40%), Positives = 20/42 (47%), Gaps = 3/42 (7%)
Query: 1009 HMLSHTGEKPFCCHICGKSL--KGNLKDHILKCHTGERPYKC 1048
S +GEKPF C CGK L H + HTGE+P
Sbjct: 3 SGSSGSGEKPFKCEECGKRFTQNSQLHSH-QRVHTGEKPSGP 43
Score = 42.9 bits (102), Expect = 2e-05
Identities = 15/42 (35%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Query: 1965 RHMLSHTGEKPFCCDICGKSL--KGNLKAHILRCQGERPYKC 2004
S +GEKPF C+ CGK L +H GE+P
Sbjct: 2 SSGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGP 43
Score = 40.6 bits (96), Expect = 1e-04
Identities = 12/35 (34%), Positives = 17/35 (48%)
Query: 1062 GVHMRKHNGEKPYNCDYCGQTFAARSTFTFHLKKH 1096
G +GEKP+ C+ CG+ F S H + H
Sbjct: 1 GSSGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVH 35
Score = 37.5 bits (88), Expect = 0.001
Identities = 13/31 (41%), Positives = 17/31 (54%)
Query: 1511 FECDFCKKKFYRNFDLQEHINTHTGNKPYQC 1541
F+C+ C K+F +N L H HTG KP
Sbjct: 13 FKCEECGKRFTQNSQLHSHQRVHTGEKPSGP 43
Score = 37.5 bits (88), Expect = 0.001
Identities = 10/35 (28%), Positives = 17/35 (48%), Gaps = 4/35 (11%)
Query: 1529 HINTHTGNKPYQCQICNKSFGTRRNYRLHLKRHKR 1563
++ +G KP++C+ C K F L H+R
Sbjct: 3 SGSSGSGEKPFKCEECGKRF----TQNSQLHSHQR 33
Score = 37.1 bits (87), Expect = 0.002
Identities = 13/38 (34%), Positives = 18/38 (47%)
Query: 895 IKTIERKFECDYCKMKFKSKSFLSEHINTHTGNKPYQC 932
+ E+ F+C+ C +F S L H HTG KP
Sbjct: 6 SGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGP 43
Score = 36.0 bits (84), Expect = 0.004
Identities = 13/30 (43%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Query: 1998 GERPYKCDVCGSSFKDKKHFSVHIRNH-GE 2026
GE+P+KC+ CG F H R H GE
Sbjct: 9 GEKPFKCEECGKRFTQNSQLHSHQRVHTGE 38
Score = 33.7 bits (78), Expect = 0.033
Identities = 13/36 (36%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Query: 1352 TGNK-FECIYCKKKYRRKFDLKEHINKHTGNKPYHC 1386
+G K F+C C K++ + L H HTG KP
Sbjct: 8 SGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGP 43
Score = 32.9 bits (76), Expect = 0.062
Identities = 11/33 (33%), Positives = 16/33 (48%)
Query: 632 KKYECDSCNKKFWSKRALSEHMIIHTGIKEHQC 664
K ++C+ C K+F L H +HTG K
Sbjct: 11 KPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGP 43
Score = 32.9 bits (76), Expect = 0.063
Identities = 7/20 (35%), Positives = 13/20 (65%)
Query: 920 HINTHTGNKPYQCQICKKSF 939
++ +G KP++C+ C K F
Sbjct: 3 SGSSGSGEKPFKCEECGKRF 22
Score = 32.1 bits (74), Expect = 0.089
Identities = 10/45 (22%), Positives = 14/45 (31%), Gaps = 6/45 (13%)
Query: 652 HMIIHTGIKEHQCHVCNTAFYHIRSLSRHLKIH--EYNESKMYKC 694
+G K +C C F L H ++H E K
Sbjct: 3 SGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGE----KPSGP 43
Score = 29.8 bits (68), Expect = 0.80
Identities = 12/34 (35%), Positives = 17/34 (50%), Gaps = 2/34 (5%)
Query: 590 RH--VHSSIKRYMCDICGKQFTTLSYLDLHRKSH 621
S K + C+ CGK+FT S L H++ H
Sbjct: 2 SSGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVH 35
Score = 28.6 bits (65), Expect = 1.6
Identities = 13/35 (37%), Positives = 16/35 (45%), Gaps = 2/35 (5%)
Query: 989 GDKCHICKVCGAKI--KGNLQKHMLSHTGEKPFCC 1021
G+K C+ CG + L H HTGEKP
Sbjct: 9 GEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGP 43
Score = 27.1 bits (61), Expect = 7.1
Identities = 9/33 (27%), Positives = 14/33 (42%), Gaps = 4/33 (12%)
Query: 1374 HINKHTGNKPYHCQICKESFYTLKTYRGDLKRH 1406
+ +G KP+ C+ C + F T L H
Sbjct: 3 SGSSGSGEKPFKCEECGKRF----TQNSQLHSH 31
>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national
project on protein structural and functional analyses;
NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 55.9 bits (136), Expect = 4e-10
Identities = 17/37 (45%), Positives = 20/37 (54%)
Query: 1040 HTGERPYKCDVCGSSFKDKWYLGVHMRKHNGEKPYNC 1076
TGE+PYKC CG F+ +L H H GEKP
Sbjct: 7 GTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGP 43
Score = 42.1 bits (100), Expect = 3e-05
Identities = 16/44 (36%), Positives = 20/44 (45%), Gaps = 6/44 (13%)
Query: 1965 RHMLSHTGEKPFCCDICGKSLKGNLKAHILRCQ----GERPYKC 2004
S TGEKP+ C CGK +H+ R Q GE+P
Sbjct: 2 SSGSSGTGEKPYKCHECGKVF--RRNSHLARHQLIHTGEKPSGP 43
Score = 40.2 bits (95), Expect = 1e-04
Identities = 13/35 (37%), Positives = 14/35 (40%)
Query: 1062 GVHMRKHNGEKPYNCDYCGQTFAARSTFTFHLKKH 1096
G GEKPY C CG+ F S H H
Sbjct: 1 GSSGSSGTGEKPYKCHECGKVFRRNSHLARHQLIH 35
Score = 38.2 bits (90), Expect = 7e-04
Identities = 13/35 (37%), Positives = 17/35 (48%), Gaps = 4/35 (11%)
Query: 1529 HINTHTGNKPYQCQICNKSFGTRRNYRLHLKRHKR 1563
++ TG KPY+C C K F HL RH+
Sbjct: 3 SGSSGTGEKPYKCHECGKVF----RRNSHLARHQL 33
Score = 37.1 bits (87), Expect = 0.002
Identities = 13/38 (34%), Positives = 18/38 (47%)
Query: 895 IKTIERKFECDYCKMKFKSKSFLSEHINTHTGNKPYQC 932
T E+ ++C C F+ S L+ H HTG KP
Sbjct: 6 SGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGP 43
Score = 36.7 bits (86), Expect = 0.002
Identities = 13/31 (41%), Positives = 15/31 (48%)
Query: 1511 FECDFCKKKFYRNFDLQEHINTHTGNKPYQC 1541
++C C K F RN L H HTG KP
Sbjct: 13 YKCHECGKVFRRNSHLARHQLIHTGEKPSGP 43
Score = 35.1 bits (82), Expect = 0.008
Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Query: 1998 GERPYKCDVCGSSFKDKKHFSVHIRNH-GE 2026
GE+PYKC CG F+ H + H H GE
Sbjct: 9 GEKPYKCHECGKVFRRNSHLARHQLIHTGE 38
Score = 34.8 bits (81), Expect = 0.013
Identities = 13/34 (38%), Positives = 16/34 (47%)
Query: 632 KKYECDSCNKKFWSKRALSEHMIIHTGIKEHQCH 665
K Y+C C K F L+ H +IHTG K
Sbjct: 11 KPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPS 44
Score = 34.4 bits (80), Expect = 0.017
Identities = 13/43 (30%), Positives = 16/43 (37%), Gaps = 2/43 (4%)
Query: 652 HMIIHTGIKEHQCHVCNTAFYHIRSLSRHLKIHEYNESKMYKC 694
TG K ++CH C F L+RH IH K
Sbjct: 3 SGSSGTGEKPYKCHECGKVFRRNSHLARHQLIH--TGEKPSGP 43
Score = 33.6 bits (78), Expect = 0.029
Identities = 15/36 (41%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Query: 1352 TGNK-FECIYCKKKYRRKFDLKEHINKHTGNKPYHC 1386
TG K ++C C K +RR L H HTG KP
Sbjct: 8 TGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGP 43
Score = 31.7 bits (73), Expect = 0.16
Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 4/34 (11%)
Query: 920 HINTHTGNKPYQCQICKKSFANKRSYQRDLKRHK 953
++ TG KPY+C C K F + S+ L RH+
Sbjct: 3 SGSSGTGEKPYKCHECGKVF-RRNSH---LARHQ 32
Score = 29.0 bits (66), Expect = 1.3
Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
Query: 989 GDKCHICKVCGA--KIKGNLQKHMLSHTGEKPFCCH 1022
G+K + C CG + +L +H L HTGEKP
Sbjct: 9 GEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPS 44
Score = 27.4 bits (62), Expect = 4.3
Identities = 13/51 (25%), Positives = 17/51 (33%), Gaps = 9/51 (17%)
Query: 590 RH--VHSSIKRYMCDICGKQFTTLSYLDLHRKSHNETVKRKEEDKKYECDS 638
+ K Y C CGK F S+L H+ H +K S
Sbjct: 2 SSGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHT-------GEKPSGPSS 45
Score = 27.1 bits (61), Expect = 7.4
Identities = 12/33 (36%), Positives = 15/33 (45%), Gaps = 3/33 (9%)
Query: 1560 RHKRSAGQLKPEDIHECKICHKIFLENSRLTRH 1592
S KP ++C C K+F NS L RH
Sbjct: 2 SSGSSGTGEKP---YKCHECGKVFRRNSHLARH 31
>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 46
Score = 55.6 bits (135), Expect = 4e-10
Identities = 17/37 (45%), Positives = 19/37 (51%)
Query: 1040 HTGERPYKCDVCGSSFKDKWYLGVHMRKHNGEKPYNC 1076
TGE+ Y C CG SF L H R H+GEKP
Sbjct: 7 GTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGP 43
Score = 48.3 bits (116), Expect = 2e-07
Identities = 16/42 (38%), Positives = 20/42 (47%), Gaps = 3/42 (7%)
Query: 1009 HMLSHTGEKPFCCHICGK--SLKGNLKDHILKCHTGERPYKC 1048
S TGEK + C CGK S L H + H+GE+P
Sbjct: 3 SGSSGTGEKLYNCKECGKSFSRAPCLLKHE-RLHSGEKPSGP 43
Score = 41.0 bits (97), Expect = 7e-05
Identities = 12/35 (34%), Positives = 16/35 (45%)
Query: 1062 GVHMRKHNGEKPYNCDYCGQTFAARSTFTFHLKKH 1096
G GEK YNC CG++F+ H + H
Sbjct: 1 GSSGSSGTGEKLYNCKECGKSFSRAPCLLKHERLH 35
Score = 41.0 bits (97), Expect = 8e-05
Identities = 15/41 (36%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 1966 HMLSHTGEKPFCCDICGK--SLKGNLKAHILRCQGERPYKC 2004
S TGEK + C CGK S L H GE+P
Sbjct: 3 SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGP 43
Score = 38.3 bits (90), Expect = 6e-04
Identities = 12/35 (34%), Positives = 18/35 (51%), Gaps = 4/35 (11%)
Query: 1529 HINTHTGNKPYQCQICNKSFGTRRNYRLHLKRHKR 1563
++ TG K Y C+ C KSF + L +H+R
Sbjct: 3 SGSSGTGEKLYNCKECGKSF----SRAPCLLKHER 33
Score = 37.9 bits (89), Expect = 0.001
Identities = 11/31 (35%), Positives = 14/31 (45%)
Query: 1511 FECDFCKKKFYRNFDLQEHINTHTGNKPYQC 1541
+ C C K F R L +H H+G KP
Sbjct: 13 YNCKECGKSFSRAPCLLKHERLHSGEKPSGP 43
Score = 37.5 bits (88), Expect = 0.001
Identities = 11/38 (28%), Positives = 15/38 (39%)
Query: 895 IKTIERKFECDYCKMKFKSKSFLSEHINTHTGNKPYQC 932
T E+ + C C F L +H H+G KP
Sbjct: 6 SGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGP 43
Score = 34.8 bits (81), Expect = 0.011
Identities = 13/30 (43%), Positives = 14/30 (46%), Gaps = 1/30 (3%)
Query: 1998 GERPYKCDVCGSSFKDKKHFSVHIRNH-GE 2026
GE+ Y C CG SF H R H GE
Sbjct: 9 GEKLYNCKECGKSFSRAPCLLKHERLHSGE 38
Score = 34.0 bits (79), Expect = 0.019
Identities = 13/36 (36%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Query: 1352 TGNK-FECIYCKKKYRRKFDLKEHINKHTGNKPYHC 1386
TG K + C C K + R L +H H+G KP
Sbjct: 8 TGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGP 43
Score = 33.7 bits (78), Expect = 0.027
Identities = 11/33 (33%), Positives = 14/33 (42%)
Query: 632 KKYECDSCNKKFWSKRALSEHMIIHTGIKEHQC 664
K Y C C K F L +H +H+G K
Sbjct: 11 KLYNCKECGKSFSRAPCLLKHERLHSGEKPSGP 43
Score = 33.3 bits (77), Expect = 0.035
Identities = 9/20 (45%), Positives = 12/20 (60%)
Query: 920 HINTHTGNKPYQCQICKKSF 939
++ TG K Y C+ C KSF
Sbjct: 3 SGSSGTGEKLYNCKECGKSF 22
Score = 33.3 bits (77), Expect = 0.040
Identities = 9/33 (27%), Positives = 14/33 (42%)
Query: 652 HMIIHTGIKEHQCHVCNTAFYHIRSLSRHLKIH 684
TG K + C C +F L +H ++H
Sbjct: 3 SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLH 35
Score = 29.4 bits (67), Expect = 0.97
Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
Query: 989 GDKCHICKVCGAKI--KGNLQKHMLSHTGEKPFCC 1021
G+K + CK CG L KH H+GEKP
Sbjct: 9 GEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGP 43
Score = 28.6 bits (65), Expect = 2.0
Identities = 10/34 (29%), Positives = 13/34 (38%), Gaps = 1/34 (2%)
Query: 588 HLRHVHSSIKRYMCDICGKQFTTLSYLDLHRKSH 621
+ K Y C CGK F+ L H + H
Sbjct: 3 SGS-SGTGEKLYNCKECGKSFSRAPCLLKHERLH 35
Score = 27.5 bits (62), Expect = 5.0
Identities = 12/35 (34%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
Query: 1946 GDKCHVCKVCGAKI--KGNMKRHMLSHTGEKPFCC 1978
G+K + CK CG + +H H+GEKP
Sbjct: 9 GEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGP 43
Score = 27.1 bits (61), Expect = 6.3
Identities = 8/20 (40%), Positives = 12/20 (60%)
Query: 1374 HINKHTGNKPYHCQICKESF 1393
+ TG K Y+C+ C +SF
Sbjct: 3 SGSSGTGEKLYNCKECGKSF 22
>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A
Length = 46
Score = 55.7 bits (135), Expect = 4e-10
Identities = 18/37 (48%), Positives = 21/37 (56%)
Query: 1040 HTGERPYKCDVCGSSFKDKWYLGVHMRKHNGEKPYNC 1076
TGE+PY C CG SF+ L H R H+GEKP
Sbjct: 7 GTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGP 43
Score = 46.4 bits (111), Expect = 8e-07
Identities = 16/42 (38%), Positives = 20/42 (47%), Gaps = 3/42 (7%)
Query: 1009 HMLSHTGEKPFCCHICGK--SLKGNLKDHILKCHTGERPYKC 1048
S TGEKP+ C CGK L H + H+GE+P
Sbjct: 3 SGSSGTGEKPYNCKECGKSFRWASCLLKHQ-RVHSGEKPSGP 43
Score = 41.4 bits (98), Expect = 5e-05
Identities = 14/35 (40%), Positives = 17/35 (48%)
Query: 1062 GVHMRKHNGEKPYNCDYCGQTFAARSTFTFHLKKH 1096
G GEKPYNC CG++F S H + H
Sbjct: 1 GSSGSSGTGEKPYNCKECGKSFRWASCLLKHQRVH 35
Score = 41.4 bits (98), Expect = 6e-05
Identities = 15/42 (35%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Query: 1965 RHMLSHTGEKPFCCDICGK--SLKGNLKAHILRCQGERPYKC 2004
S TGEKP+ C CGK L H GE+P
Sbjct: 2 SSGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGP 43
Score = 38.3 bits (90), Expect = 7e-04
Identities = 12/38 (31%), Positives = 17/38 (44%)
Query: 895 IKTIERKFECDYCKMKFKSKSFLSEHINTHTGNKPYQC 932
T E+ + C C F+ S L +H H+G KP
Sbjct: 6 SGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGP 43
Score = 37.2 bits (87), Expect = 0.002
Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 4/35 (11%)
Query: 1529 HINTHTGNKPYQCQICNKSFGTRRNYRLHLKRHKR 1563
++ TG KPY C+ C KSF + L +H+R
Sbjct: 3 SGSSGTGEKPYNCKECGKSF----RWASCLLKHQR 33
Score = 36.8 bits (86), Expect = 0.003
Identities = 10/31 (32%), Positives = 13/31 (41%)
Query: 1511 FECDFCKKKFYRNFDLQEHINTHTGNKPYQC 1541
+ C C K F L +H H+G KP
Sbjct: 13 YNCKECGKSFRWASCLLKHQRVHSGEKPSGP 43
Score = 34.9 bits (81), Expect = 0.012
Identities = 13/36 (36%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Query: 1352 TGNK-FECIYCKKKYRRKFDLKEHINKHTGNKPYHC 1386
TG K + C C K +R L +H H+G KP
Sbjct: 8 TGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGP 43
Score = 34.5 bits (80), Expect = 0.014
Identities = 14/30 (46%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Query: 1998 GERPYKCDVCGSSFKDKKHFSVHIRNH-GE 2026
GE+PY C CG SF+ H R H GE
Sbjct: 9 GEKPYNCKECGKSFRWASCLLKHQRVHSGE 38
Score = 34.5 bits (80), Expect = 0.016
Identities = 11/33 (33%), Positives = 14/33 (42%)
Query: 632 KKYECDSCNKKFWSKRALSEHMIIHTGIKEHQC 664
K Y C C K F L +H +H+G K
Sbjct: 11 KPYNCKECGKSFRWASCLLKHQRVHSGEKPSGP 43
Score = 32.9 bits (76), Expect = 0.049
Identities = 11/45 (24%), Positives = 16/45 (35%), Gaps = 6/45 (13%)
Query: 652 HMIIHTGIKEHQCHVCNTAFYHIRSLSRHLKIH--EYNESKMYKC 694
TG K + C C +F L +H ++H E K
Sbjct: 3 SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGE----KPSGP 43
Score = 32.5 bits (75), Expect = 0.071
Identities = 12/34 (35%), Positives = 18/34 (52%), Gaps = 4/34 (11%)
Query: 920 HINTHTGNKPYQCQICKKSFANKRSYQRDLKRHK 953
++ TG KPY C+ C KSF + L +H+
Sbjct: 3 SGSSGTGEKPYNCKECGKSF----RWASCLLKHQ 32
Score = 29.8 bits (68), Expect = 0.70
Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
Query: 989 GDKCHICKVCGA--KIKGNLQKHMLSHTGEKPFCC 1021
G+K + CK CG + L KH H+GEKP
Sbjct: 9 GEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGP 43
Score = 28.3 bits (64), Expect = 2.4
Identities = 12/42 (28%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Query: 1939 RHREWVHGDKCHVCKVCGA--KIKGNMKRHMLSHTGEKPFCC 1978
G+K + CK CG + + +H H+GEKP
Sbjct: 2 SSGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGP 43
Score = 27.5 bits (62), Expect = 5.1
Identities = 11/33 (33%), Positives = 17/33 (51%), Gaps = 4/33 (12%)
Query: 1374 HINKHTGNKPYHCQICKESFYTLKTYRGDLKRH 1406
+ TG KPY+C+ C +SF + L +H
Sbjct: 3 SGSSGTGEKPYNCKECGKSF----RWASCLLKH 31
Score = 27.1 bits (61), Expect = 5.3
Identities = 11/34 (32%), Positives = 14/34 (41%), Gaps = 2/34 (5%)
Query: 590 RH--VHSSIKRYMCDICGKQFTTLSYLDLHRKSH 621
+ K Y C CGK F S L H++ H
Sbjct: 2 SSGSSGTGEKPYNCKECGKSFRWASCLLKHQRVH 35
Score = 27.1 bits (61), Expect = 7.1
Identities = 8/30 (26%), Positives = 11/30 (36%)
Query: 430 ECDYCKRKFTCKRYLAEHINAHTGNTIYGC 459
C C + F L +H H+G G
Sbjct: 14 NCKECGKSFRWASCLLKHQRVHSGEKPSGP 43
>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 55.6 bits (135), Expect = 4e-10
Identities = 17/37 (45%), Positives = 22/37 (59%)
Query: 1040 HTGERPYKCDVCGSSFKDKWYLGVHMRKHNGEKPYNC 1076
TGE+P+KC CG S+ + +L H R H GEKP
Sbjct: 7 GTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGP 43
Score = 48.3 bits (116), Expect = 2e-07
Identities = 19/43 (44%), Positives = 23/43 (53%), Gaps = 3/43 (6%)
Query: 1008 KHMLSHTGEKPFCCHICGKSL--KGNLKDHILKCHTGERPYKC 1048
S TGEKPF C CGKS + +L H + HTGE+P
Sbjct: 2 SSGSSGTGEKPFKCGECGKSYNQRVHLTQH-QRVHTGEKPSGP 43
Score = 42.5 bits (101), Expect = 2e-05
Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 6/44 (13%)
Query: 1965 RHMLSHTGEKPFCCDICGKSLKGNLKAHILRCQ----GERPYKC 2004
S TGEKPF C CGKS N + H+ + Q GE+P
Sbjct: 2 SSGSSGTGEKPFKCGECGKSY--NQRVHLTQHQRVHTGEKPSGP 43
Score = 39.0 bits (92), Expect = 3e-04
Identities = 12/35 (34%), Positives = 17/35 (48%)
Query: 1062 GVHMRKHNGEKPYNCDYCGQTFAARSTFTFHLKKH 1096
G GEKP+ C CG+++ R T H + H
Sbjct: 1 GSSGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVH 35
Score = 38.3 bits (90), Expect = 6e-04
Identities = 12/38 (31%), Positives = 18/38 (47%)
Query: 895 IKTIERKFECDYCKMKFKSKSFLSEHINTHTGNKPYQC 932
T E+ F+C C + + L++H HTG KP
Sbjct: 6 SGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGP 43
Score = 38.3 bits (90), Expect = 7e-04
Identities = 14/35 (40%), Positives = 22/35 (62%), Gaps = 4/35 (11%)
Query: 1529 HINTHTGNKPYQCQICNKSFGTRRNYRLHLKRHKR 1563
++ TG KP++C C KS+ N R+HL +H+R
Sbjct: 3 SGSSGTGEKPFKCGECGKSY----NQRVHLTQHQR 33
Score = 37.5 bits (88), Expect = 0.001
Identities = 11/31 (35%), Positives = 15/31 (48%)
Query: 1511 FECDFCKKKFYRNFDLQEHINTHTGNKPYQC 1541
F+C C K + + L +H HTG KP
Sbjct: 13 FKCGECGKSYNQRVHLTQHQRVHTGEKPSGP 43
Score = 36.0 bits (84), Expect = 0.005
Identities = 14/30 (46%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Query: 1998 GERPYKCDVCGSSFKDKKHFSVHIRNH-GE 2026
GE+P+KC CG S+ + H + H R H GE
Sbjct: 9 GEKPFKCGECGKSYNQRVHLTQHQRVHTGE 38
Score = 34.4 bits (80), Expect = 0.016
Identities = 10/33 (30%), Positives = 17/33 (51%)
Query: 632 KKYECDSCNKKFWSKRALSEHMIIHTGIKEHQC 664
K ++C C K + + L++H +HTG K
Sbjct: 11 KPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGP 43
Score = 34.0 bits (79), Expect = 0.022
Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Query: 1352 TGNK-FECIYCKKKYRRKFDLKEHINKHTGNKPYHC 1386
TG K F+C C K Y ++ L +H HTG KP
Sbjct: 8 TGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGP 43
Score = 32.1 bits (74), Expect = 0.11
Identities = 9/43 (20%), Positives = 16/43 (37%), Gaps = 2/43 (4%)
Query: 652 HMIIHTGIKEHQCHVCNTAFYHIRSLSRHLKIHEYNESKMYKC 694
TG K +C C ++ L++H ++H K
Sbjct: 3 SGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVH--TGEKPSGP 43
Score = 31.7 bits (73), Expect = 0.17
Identities = 8/20 (40%), Positives = 13/20 (65%)
Query: 920 HINTHTGNKPYQCQICKKSF 939
++ TG KP++C C KS+
Sbjct: 3 SGSSGTGEKPFKCGECGKSY 22
Score = 29.4 bits (67), Expect = 0.83
Identities = 13/35 (37%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
Query: 989 GDKCHICKVCGAKI--KGNLQKHMLSHTGEKPFCC 1021
G+K C CG + +L +H HTGEKP
Sbjct: 9 GEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGP 43
Score = 27.9 bits (63), Expect = 3.8
Identities = 10/51 (19%), Positives = 17/51 (33%), Gaps = 9/51 (17%)
Query: 590 RH--VHSSIKRYMCDICGKQFTTLSYLDLHRKSHNETVKRKEEDKKYECDS 638
+ K + C CGK + +L H++ H +K S
Sbjct: 2 SSGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHT-------GEKPSGPSS 45
Score = 27.5 bits (62), Expect = 4.3
Identities = 12/35 (34%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
Query: 1946 GDKCHVCKVCGAKI--KGNMKRHMLSHTGEKPFCC 1978
G+K C CG + ++ +H HTGEKP
Sbjct: 9 GEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGP 43
Score = 26.7 bits (60), Expect = 8.5
Identities = 8/37 (21%), Positives = 13/37 (35%), Gaps = 6/37 (16%)
Query: 381 AKHMRVHLRSVHNGKERKFICDICGKQFTSNIHASRH 417
E+ F C CGK + +H ++H
Sbjct: 1 GSSGSSGT------GEKPFKCGECGKSYNQRVHLTQH 31
>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 55.6 bits (135), Expect = 4e-10
Identities = 12/37 (32%), Positives = 19/37 (51%)
Query: 1040 HTGERPYKCDVCGSSFKDKWYLGVHMRKHNGEKPYNC 1076
+G++PY+C C +F +L H R H GE+
Sbjct: 7 GSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGP 43
Score = 48.3 bits (116), Expect = 2e-07
Identities = 15/43 (34%), Positives = 20/43 (46%), Gaps = 3/43 (6%)
Query: 1008 KHMLSHTGEKPFCCHICGK--SLKGNLKDHILKCHTGERPYKC 1048
S +G+KP+ C C K G+L H + HTGER
Sbjct: 2 SSGSSGSGKKPYECKECRKTFIQIGHLNQH-KRVHTGERSSGP 43
Score = 40.6 bits (96), Expect = 9e-05
Identities = 11/35 (31%), Positives = 15/35 (42%)
Query: 1062 GVHMRKHNGEKPYNCDYCGQTFAARSTFTFHLKKH 1096
G +G+KPY C C +TF H + H
Sbjct: 1 GSSGSSGSGKKPYECKECRKTFIQIGHLNQHKRVH 35
Score = 39.8 bits (94), Expect = 2e-04
Identities = 11/44 (25%), Positives = 18/44 (40%), Gaps = 6/44 (13%)
Query: 1965 RHMLSHTGEKPFCCDICGKSLKGNLKAHILRCQ----GERPYKC 2004
S +G+KP+ C C K+ H+ + + GER
Sbjct: 2 SSGSSGSGKKPYECKECRKTF--IQIGHLNQHKRVHTGERSSGP 43
Score = 39.4 bits (93), Expect = 2e-04
Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 4/35 (11%)
Query: 1529 HINTHTGNKPYQCQICNKSFGTRRNYRLHLKRHKR 1563
++ +G KPY+C+ C K+F HL +HKR
Sbjct: 3 SGSSGSGKKPYECKECRKTF----IQIGHLNQHKR 33
Score = 37.9 bits (89), Expect = 8e-04
Identities = 9/36 (25%), Positives = 17/36 (47%)
Query: 897 TIERKFECDYCKMKFKSKSFLSEHINTHTGNKPYQC 932
+ ++ +EC C+ F L++H HTG +
Sbjct: 8 SGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGP 43
Score = 37.1 bits (87), Expect = 0.002
Identities = 10/31 (32%), Positives = 15/31 (48%)
Query: 1511 FECDFCKKKFYRNFDLQEHINTHTGNKPYQC 1541
+EC C+K F + L +H HTG +
Sbjct: 13 YECKECRKTFIQIGHLNQHKRVHTGERSSGP 43
Score = 36.7 bits (86), Expect = 0.002
Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Query: 1998 GERPYKCDVCGSSFKDKKHFSVHIRNH-GE 2026
G++PY+C C +F H + H R H GE
Sbjct: 9 GKKPYECKECRKTFIQIGHLNQHKRVHTGE 38
Score = 34.1 bits (79), Expect = 0.021
Identities = 11/36 (30%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Query: 1352 TGNK-FECIYCKKKYRRKFDLKEHINKHTGNKPYHC 1386
+G K +EC C+K + + L +H HTG +
Sbjct: 8 SGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGP 43
Score = 33.7 bits (78), Expect = 0.027
Identities = 8/20 (40%), Positives = 15/20 (75%)
Query: 920 HINTHTGNKPYQCQICKKSF 939
++ +G KPY+C+ C+K+F
Sbjct: 3 SGSSGSGKKPYECKECRKTF 22
Score = 33.7 bits (78), Expect = 0.034
Identities = 12/33 (36%), Positives = 16/33 (48%)
Query: 632 KKYECDSCNKKFWSKRALSEHMIIHTGIKEHQC 664
K YEC C K F L++H +HTG +
Sbjct: 11 KPYECKECRKTFIQIGHLNQHKRVHTGERSSGP 43
Score = 32.5 bits (75), Expect = 0.076
Identities = 9/33 (27%), Positives = 16/33 (48%)
Query: 652 HMIIHTGIKEHQCHVCNTAFYHIRSLSRHLKIH 684
+G K ++C C F I L++H ++H
Sbjct: 3 SGSSGSGKKPYECKECRKTFIQIGHLNQHKRVH 35
Score = 32.1 bits (74), Expect = 0.093
Identities = 12/35 (34%), Positives = 16/35 (45%), Gaps = 2/35 (5%)
Query: 989 GDKCHICKVCGA--KIKGNLQKHMLSHTGEKPFCC 1021
G K + CK C G+L +H HTGE+
Sbjct: 9 GKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGP 43
Score = 29.8 bits (68), Expect = 0.61
Identities = 11/35 (31%), Positives = 16/35 (45%), Gaps = 2/35 (5%)
Query: 1946 GDKCHVCKVCGA--KIKGNMKRHMLSHTGEKPFCC 1978
G K + CK C G++ +H HTGE+
Sbjct: 9 GKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGP 43
Score = 28.3 bits (64), Expect = 2.4
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 593 HSSIKRYMCDICGKQFTTLSYLDLHRKSH 621
S K Y C C K F + +L+ H++ H
Sbjct: 7 GSGKKPYECKECRKTFIQIGHLNQHKRVH 35
Score = 28.3 bits (64), Expect = 2.6
Identities = 10/33 (30%), Positives = 17/33 (51%), Gaps = 4/33 (12%)
Query: 1374 HINKHTGNKPYHCQICKESFYTLKTYRGDLKRH 1406
+ +G KPY C+ C+++F G L +H
Sbjct: 3 SGSSGSGKKPYECKECRKTF----IQIGHLNQH 31
Score = 27.5 bits (62), Expect = 4.3
Identities = 10/30 (33%), Positives = 14/30 (46%)
Query: 430 ECDYCKRKFTCKRYLAEHINAHTGNTIYGC 459
EC C++ F +L +H HTG G
Sbjct: 14 ECKECRKTFIQIGHLNQHKRVHTGERSSGP 43
>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 55.6 bits (135), Expect = 4e-10
Identities = 17/37 (45%), Positives = 20/37 (54%)
Query: 1040 HTGERPYKCDVCGSSFKDKWYLGVHMRKHNGEKPYNC 1076
TGE+PYKC+ CG F +L H R H G KP
Sbjct: 7 GTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGP 43
Score = 47.5 bits (114), Expect = 4e-07
Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 3/43 (6%)
Query: 1008 KHMLSHTGEKPFCCHICGK--SLKGNLKDHILKCHTGERPYKC 1048
S TGEKP+ C+ CGK + +L +H + HTG +P
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQNSHLANH-QRIHTGVKPSGP 43
Score = 41.4 bits (98), Expect = 6e-05
Identities = 14/44 (31%), Positives = 19/44 (43%), Gaps = 6/44 (13%)
Query: 1965 RHMLSHTGEKPFCCDICGKSLKGNLKAHILRCQ----GERPYKC 2004
S TGEKP+ C+ CGK +H+ Q G +P
Sbjct: 2 SSGSSGTGEKPYKCNECGKVF--TQNSHLANHQRIHTGVKPSGP 43
Score = 40.2 bits (95), Expect = 1e-04
Identities = 13/35 (37%), Positives = 16/35 (45%)
Query: 1062 GVHMRKHNGEKPYNCDYCGQTFAARSTFTFHLKKH 1096
G GEKPY C+ CG+ F S H + H
Sbjct: 1 GSSGSSGTGEKPYKCNECGKVFTQNSHLANHQRIH 35
Score = 37.9 bits (89), Expect = 0.001
Identities = 13/38 (34%), Positives = 18/38 (47%)
Query: 895 IKTIERKFECDYCKMKFKSKSFLSEHINTHTGNKPYQC 932
T E+ ++C+ C F S L+ H HTG KP
Sbjct: 6 SGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGP 43
Score = 37.5 bits (88), Expect = 0.001
Identities = 12/31 (38%), Positives = 16/31 (51%)
Query: 1511 FECDFCKKKFYRNFDLQEHINTHTGNKPYQC 1541
++C+ C K F +N L H HTG KP
Sbjct: 13 YKCNECGKVFTQNSHLANHQRIHTGVKPSGP 43
Score = 37.5 bits (88), Expect = 0.001
Identities = 13/35 (37%), Positives = 17/35 (48%), Gaps = 4/35 (11%)
Query: 1529 HINTHTGNKPYQCQICNKSFGTRRNYRLHLKRHKR 1563
++ TG KPY+C C K F HL H+R
Sbjct: 3 SGSSGTGEKPYKCNECGKVF----TQNSHLANHQR 33
Score = 36.0 bits (84), Expect = 0.005
Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Query: 1998 GERPYKCDVCGSSFKDKKHFSVHIRNH-GE 2026
GE+PYKC+ CG F H + H R H G
Sbjct: 9 GEKPYKCNECGKVFTQNSHLANHQRIHTGV 38
Score = 33.6 bits (78), Expect = 0.028
Identities = 13/34 (38%), Positives = 17/34 (50%)
Query: 632 KKYECDSCNKKFWSKRALSEHMIIHTGIKEHQCH 665
K Y+C+ C K F L+ H IHTG+K
Sbjct: 11 KPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPS 44
Score = 33.3 bits (77), Expect = 0.035
Identities = 13/36 (36%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Query: 1352 TGNK-FECIYCKKKYRRKFDLKEHINKHTGNKPYHC 1386
TG K ++C C K + + L H HTG KP
Sbjct: 8 TGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGP 43
Score = 31.3 bits (72), Expect = 0.18
Identities = 11/43 (25%), Positives = 16/43 (37%), Gaps = 2/43 (4%)
Query: 652 HMIIHTGIKEHQCHVCNTAFYHIRSLSRHLKIHEYNESKMYKC 694
TG K ++C+ C F L+ H +IH K
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLANHQRIH--TGVKPSGP 43
Score = 31.3 bits (72), Expect = 0.22
Identities = 9/20 (45%), Positives = 12/20 (60%)
Query: 920 HINTHTGNKPYQCQICKKSF 939
++ TG KPY+C C K F
Sbjct: 3 SGSSGTGEKPYKCNECGKVF 22
Score = 28.6 bits (65), Expect = 1.6
Identities = 12/36 (33%), Positives = 15/36 (41%), Gaps = 2/36 (5%)
Query: 989 GDKCHICKVCGAKI--KGNLQKHMLSHTGEKPFCCH 1022
G+K + C CG +L H HTG KP
Sbjct: 9 GEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPS 44
Score = 28.3 bits (64), Expect = 2.2
Identities = 12/34 (35%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 588 HLRHVHSSIKRYMCDICGKQFTTLSYLDLHRKSH 621
+ K Y C+ CGK FT S+L H++ H
Sbjct: 3 SGS-SGTGEKPYKCNECGKVFTQNSHLANHQRIH 35
Score = 26.7 bits (60), Expect = 8.4
Identities = 11/30 (36%), Positives = 15/30 (50%)
Query: 430 ECDYCKRKFTCKRYLAEHINAHTGNTIYGC 459
+C+ C + FT +LA H HTG G
Sbjct: 14 KCNECGKVFTQNSHLANHQRIHTGVKPSGP 43
>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding,
metal-binding, nuclear protein, repeat, transcription,
transcription regulation; NMR {Homo sapiens} SCOP:
k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A
Length = 42
Score = 55.6 bits (135), Expect = 4e-10
Identities = 15/39 (38%), Positives = 19/39 (48%)
Query: 1038 KCHTGERPYKCDVCGSSFKDKWYLGVHMRKHNGEKPYNC 1076
+GE PY+C CG +F K L H R H GE +
Sbjct: 3 SGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSS 41
Score = 46.7 bits (112), Expect = 6e-07
Identities = 13/39 (33%), Positives = 17/39 (43%), Gaps = 3/39 (7%)
Query: 1012 SHTGEKPFCCHICGK--SLKGNLKDHILKCHTGERPYKC 1048
+GE P+ C CGK + K L H + H GE
Sbjct: 4 GSSGENPYECSECGKAFNRKDQLISH-QRTHAGESGPSS 41
Score = 39.4 bits (93), Expect = 3e-04
Identities = 11/36 (30%), Positives = 13/36 (36%)
Query: 897 TIERKFECDYCKMKFKSKSFLSEHINTHTGNKPYQC 932
+ E +EC C F K L H TH G
Sbjct: 6 SGENPYECSECGKAFNRKDQLISHQRTHAGESGPSS 41
Score = 39.0 bits (92), Expect = 3e-04
Identities = 12/38 (31%), Positives = 16/38 (42%), Gaps = 2/38 (5%)
Query: 1969 SHTGEKPFCCDICGK--SLKGNLKAHILRCQGERPYKC 2004
+GE P+ C CGK + K L +H GE
Sbjct: 4 GSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSS 41
Score = 38.3 bits (90), Expect = 6e-04
Identities = 11/31 (35%), Positives = 12/31 (38%)
Query: 1511 FECDFCKKKFYRNFDLQEHINTHTGNKPYQC 1541
+EC C K F R L H TH G
Sbjct: 11 YECSECGKAFNRKDQLISHQRTHAGESGPSS 41
Score = 36.3 bits (85), Expect = 0.003
Identities = 11/33 (33%), Positives = 17/33 (51%), Gaps = 4/33 (12%)
Query: 1531 NTHTGNKPYQCQICNKSFGTRRNYRLHLKRHKR 1563
+ +G PY+C C K+F N + L H+R
Sbjct: 3 SGSSGENPYECSECGKAF----NRKDQLISHQR 31
Score = 36.0 bits (84), Expect = 0.003
Identities = 10/31 (32%), Positives = 14/31 (45%)
Query: 1066 RKHNGEKPYNCDYCGQTFAARSTFTFHLKKH 1096
+GE PY C CG+ F + H + H
Sbjct: 3 SGSSGENPYECSECGKAFNRKDQLISHQRTH 33
Score = 36.0 bits (84), Expect = 0.004
Identities = 14/30 (46%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Query: 1998 GERPYKCDVCGSSFKDKKHFSVHIRNH-GE 2026
GE PY+C CG +F K H R H GE
Sbjct: 7 GENPYECSECGKAFNRKDQLISHQRTHAGE 36
Score = 35.2 bits (82), Expect = 0.007
Identities = 12/38 (31%), Positives = 15/38 (39%), Gaps = 1/38 (2%)
Query: 1350 SSTGNK-FECIYCKKKYRRKFDLKEHINKHTGNKPYHC 1386
S+G +EC C K + RK L H H G
Sbjct: 4 GSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSS 41
Score = 34.4 bits (80), Expect = 0.014
Identities = 11/33 (33%), Positives = 11/33 (33%)
Query: 632 KKYECDSCNKKFWSKRALSEHMIIHTGIKEHQC 664
YEC C K F K L H H G
Sbjct: 9 NPYECSECGKAFNRKDQLISHQRTHAGESGPSS 41
Score = 33.6 bits (78), Expect = 0.024
Identities = 8/21 (38%), Positives = 12/21 (57%)
Query: 922 NTHTGNKPYQCQICKKSFANK 942
+ +G PY+C C K+F K
Sbjct: 3 SGSSGENPYECSECGKAFNRK 23
Score = 29.4 bits (67), Expect = 0.83
Identities = 8/30 (26%), Positives = 12/30 (40%)
Query: 655 IHTGIKEHQCHVCNTAFYHIRSLSRHLKIH 684
+G ++C C AF L H + H
Sbjct: 4 GSSGENPYECSECGKAFNRKDQLISHQRTH 33
Score = 28.2 bits (64), Expect = 2.2
Identities = 10/32 (31%), Positives = 13/32 (40%)
Query: 590 RHVHSSIKRYMCDICGKQFTTLSYLDLHRKSH 621
S Y C CGK F L H+++H
Sbjct: 2 SSGSSGENPYECSECGKAFNRKDQLISHQRTH 33
Score = 27.9 bits (63), Expect = 3.1
Identities = 10/35 (28%), Positives = 13/35 (37%), Gaps = 2/35 (5%)
Query: 989 GDKCHICKVCGAKI--KGNLQKHMLSHTGEKPFCC 1021
G+ + C CG K L H +H GE
Sbjct: 7 GENPYECSECGKAFNRKDQLISHQRTHAGESGPSS 41
Score = 26.7 bits (60), Expect = 7.4
Identities = 6/16 (37%), Positives = 9/16 (56%)
Query: 1378 HTGNKPYHCQICKESF 1393
+G PY C C ++F
Sbjct: 5 SSGENPYECSECGKAF 20
Score = 26.7 bits (60), Expect = 9.3
Identities = 9/35 (25%), Positives = 13/35 (37%), Gaps = 2/35 (5%)
Query: 1946 GDKCHVCKVCGAKI--KGNMKRHMLSHTGEKPFCC 1978
G+ + C CG K + H +H GE
Sbjct: 7 GENPYECSECGKAFNRKDQLISHQRTHAGESGPSS 41
>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 44
Score = 55.6 bits (135), Expect = 5e-10
Identities = 14/37 (37%), Positives = 19/37 (51%)
Query: 1040 HTGERPYKCDVCGSSFKDKWYLGVHMRKHNGEKPYNC 1076
TGE PY+C CG F K L H + H+G+ +
Sbjct: 7 GTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS 43
Score = 46.3 bits (111), Expect = 9e-07
Identities = 16/43 (37%), Positives = 19/43 (44%), Gaps = 3/43 (6%)
Query: 1008 KHMLSHTGEKPFCCHICGK--SLKGNLKDHILKCHTGERPYKC 1048
S TGE P+ C CGK S K L H K H+G+
Sbjct: 2 SSGSSGTGENPYECCECGKVFSRKDQLVSH-QKTHSGQSGPSS 43
Score = 40.9 bits (97), Expect = 6e-05
Identities = 12/35 (34%), Positives = 15/35 (42%)
Query: 1062 GVHMRKHNGEKPYNCDYCGQTFAARSTFTFHLKKH 1096
G GE PY C CG+ F+ + H K H
Sbjct: 1 GSSGSSGTGENPYECCECGKVFSRKDQLVSHQKTH 35
Score = 38.2 bits (90), Expect = 6e-04
Identities = 15/45 (33%), Positives = 18/45 (40%), Gaps = 10/45 (22%)
Query: 1966 HMLSHTGEKPFCCDICGK--SLKGNLKAHILRCQ----GERPYKC 2004
S TGE P+ C CGK S K L +H Q G+
Sbjct: 3 SGSSGTGENPYECCECGKVFSRKDQLVSH----QKTHSGQSGPSS 43
Score = 37.1 bits (87), Expect = 0.002
Identities = 12/36 (33%), Positives = 14/36 (38%)
Query: 897 TIERKFECDYCKMKFKSKSFLSEHINTHTGNKPYQC 932
T E +EC C F K L H TH+G
Sbjct: 8 TGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS 43
Score = 36.3 bits (85), Expect = 0.003
Identities = 10/35 (28%), Positives = 17/35 (48%), Gaps = 4/35 (11%)
Query: 1529 HINTHTGNKPYQCQICNKSFGTRRNYRLHLKRHKR 1563
++ TG PY+C C K F + + L H++
Sbjct: 3 SGSSGTGENPYECCECGKVF----SRKDQLVSHQK 33
Score = 36.3 bits (85), Expect = 0.003
Identities = 11/31 (35%), Positives = 13/31 (41%)
Query: 1511 FECDFCKKKFYRNFDLQEHINTHTGNKPYQC 1541
+EC C K F R L H TH+G
Sbjct: 13 YECCECGKVFSRKDQLVSHQKTHSGQSGPSS 43
Score = 35.9 bits (84), Expect = 0.004
Identities = 12/30 (40%), Positives = 15/30 (50%), Gaps = 1/30 (3%)
Query: 1998 GERPYKCDVCGSSFKDKKHFSVHIRNH-GE 2026
GE PY+C CG F K H + H G+
Sbjct: 9 GENPYECCECGKVFSRKDQLVSHQKTHSGQ 38
Score = 34.0 bits (79), Expect = 0.023
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 920 HINTHTGNKPYQCQICKKSFANK 942
++ TG PY+C C K F+ K
Sbjct: 3 SGSSGTGENPYECCECGKVFSRK 25
Score = 33.6 bits (78), Expect = 0.028
Identities = 11/33 (33%), Positives = 12/33 (36%)
Query: 632 KKYECDSCNKKFWSKRALSEHMIIHTGIKEHQC 664
YEC C K F K L H H+G
Sbjct: 11 NPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS 43
Score = 33.6 bits (78), Expect = 0.031
Identities = 12/36 (33%), Positives = 15/36 (41%), Gaps = 1/36 (2%)
Query: 1352 TGNK-FECIYCKKKYRRKFDLKEHINKHTGNKPYHC 1386
TG +EC C K + RK L H H+G
Sbjct: 8 TGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS 43
Score = 29.8 bits (68), Expect = 0.68
Identities = 9/35 (25%), Positives = 14/35 (40%), Gaps = 2/35 (5%)
Query: 989 GDKCHICKVCGA--KIKGNLQKHMLSHTGEKPFCC 1021
G+ + C CG K L H +H+G+
Sbjct: 9 GENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS 43
Score = 29.8 bits (68), Expect = 0.68
Identities = 9/33 (27%), Positives = 11/33 (33%)
Query: 652 HMIIHTGIKEHQCHVCNTAFYHIRSLSRHLKIH 684
TG ++C C F L H K H
Sbjct: 3 SGSSGTGENPYECCECGKVFSRKDQLVSHQKTH 35
Score = 29.4 bits (67), Expect = 0.95
Identities = 10/29 (34%), Positives = 14/29 (48%)
Query: 593 HSSIKRYMCDICGKQFTTLSYLDLHRKSH 621
+ Y C CGK F+ L H+K+H
Sbjct: 7 GTGENPYECCECGKVFSRKDQLVSHQKTH 35
Score = 27.5 bits (62), Expect = 4.4
Identities = 8/35 (22%), Positives = 14/35 (40%), Gaps = 2/35 (5%)
Query: 1946 GDKCHVCKVCGA--KIKGNMKRHMLSHTGEKPFCC 1978
G+ + C CG K + H +H+G+
Sbjct: 9 GENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS 43
Score = 26.7 bits (60), Expect = 8.5
Identities = 7/20 (35%), Positives = 9/20 (45%)
Query: 1374 HINKHTGNKPYHCQICKESF 1393
+ TG PY C C + F
Sbjct: 3 SGSSGTGENPYECCECGKVF 22
>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 55.6 bits (135), Expect = 5e-10
Identities = 16/37 (43%), Positives = 23/37 (62%)
Query: 1040 HTGERPYKCDVCGSSFKDKWYLGVHMRKHNGEKPYNC 1076
+GE+P+KC CG +F+ +L H+R H GEKP
Sbjct: 7 GSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGP 43
Score = 48.3 bits (116), Expect = 2e-07
Identities = 18/43 (41%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
Query: 1008 KHMLSHTGEKPFCCHICGK--SLKGNLKDHILKCHTGERPYKC 1048
S +GEKPF C CGK +L H L+ HTGE+P
Sbjct: 2 SSGSSGSGEKPFKCKECGKAFRQNIHLASH-LRIHTGEKPSGP 43
Score = 41.7 bits (99), Expect = 4e-05
Identities = 14/44 (31%), Positives = 18/44 (40%), Gaps = 6/44 (13%)
Query: 1965 RHMLSHTGEKPFCCDICGKSLKGNLKAHILRCQ----GERPYKC 2004
S +GEKPF C CGK+ H+ GE+P
Sbjct: 2 SSGSSGSGEKPFKCKECGKAF--RQNIHLASHLRIHTGEKPSGP 43
Score = 40.2 bits (95), Expect = 1e-04
Identities = 12/35 (34%), Positives = 16/35 (45%)
Query: 1062 GVHMRKHNGEKPYNCDYCGQTFAARSTFTFHLKKH 1096
G +GEKP+ C CG+ F HL+ H
Sbjct: 1 GSSGSSGSGEKPFKCKECGKAFRQNIHLASHLRIH 35
Score = 38.2 bits (90), Expect = 7e-04
Identities = 11/35 (31%), Positives = 19/35 (54%), Gaps = 4/35 (11%)
Query: 1529 HINTHTGNKPYQCQICNKSFGTRRNYRLHLKRHKR 1563
++ +G KP++C+ C K+F +HL H R
Sbjct: 3 SGSSGSGEKPFKCKECGKAF----RQNIHLASHLR 33
Score = 38.2 bits (90), Expect = 7e-04
Identities = 13/31 (41%), Positives = 16/31 (51%)
Query: 1511 FECDFCKKKFYRNFDLQEHINTHTGNKPYQC 1541
F+C C K F +N L H+ HTG KP
Sbjct: 13 FKCKECGKAFRQNIHLASHLRIHTGEKPSGP 43
Score = 37.9 bits (89), Expect = 8e-04
Identities = 12/38 (31%), Positives = 18/38 (47%)
Query: 895 IKTIERKFECDYCKMKFKSKSFLSEHINTHTGNKPYQC 932
+ E+ F+C C F+ L+ H+ HTG KP
Sbjct: 6 SGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGP 43
Score = 35.9 bits (84), Expect = 0.005
Identities = 14/30 (46%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Query: 1998 GERPYKCDVCGSSFKDKKHFSVHIRNH-GE 2026
GE+P+KC CG +F+ H + H+R H GE
Sbjct: 9 GEKPFKCKECGKAFRQNIHLASHLRIHTGE 38
Score = 35.2 bits (82), Expect = 0.008
Identities = 12/34 (35%), Positives = 16/34 (47%)
Query: 632 KKYECDSCNKKFWSKRALSEHMIIHTGIKEHQCH 665
K ++C C K F L+ H+ IHTG K
Sbjct: 11 KPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPS 44
Score = 34.8 bits (81), Expect = 0.013
Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Query: 1352 TGNK-FECIYCKKKYRRKFDLKEHINKHTGNKPYHC 1386
+G K F+C C K +R+ L H+ HTG KP
Sbjct: 8 SGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGP 43
Score = 33.6 bits (78), Expect = 0.034
Identities = 13/45 (28%), Positives = 17/45 (37%), Gaps = 6/45 (13%)
Query: 652 HMIIHTGIKEHQCHVCNTAFYHIRSLSRHLKIH--EYNESKMYKC 694
+G K +C C AF L+ HL+IH E K
Sbjct: 3 SGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGE----KPSGP 43
Score = 31.7 bits (73), Expect = 0.17
Identities = 7/20 (35%), Positives = 14/20 (70%)
Query: 920 HINTHTGNKPYQCQICKKSF 939
++ +G KP++C+ C K+F
Sbjct: 3 SGSSGSGEKPFKCKECGKAF 22
Score = 29.8 bits (68), Expect = 0.70
Identities = 14/36 (38%), Positives = 18/36 (50%), Gaps = 2/36 (5%)
Query: 989 GDKCHICKVCGA--KIKGNLQKHMLSHTGEKPFCCH 1022
G+K CK CG + +L H+ HTGEKP
Sbjct: 9 GEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPS 44
Score = 27.1 bits (61), Expect = 5.9
Identities = 13/35 (37%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
Query: 1946 GDKCHVCKVCGA--KIKGNMKRHMLSHTGEKPFCC 1978
G+K CK CG + ++ H+ HTGEKP
Sbjct: 9 GEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGP 43
Score = 27.1 bits (61), Expect = 6.3
Identities = 12/38 (31%), Positives = 15/38 (39%), Gaps = 6/38 (15%)
Query: 381 AKHMRVHLRSVHNGKERKFICDICGKQFTSNIHASRHK 418
+G E+ F C CGK F NIH + H
Sbjct: 1 GSSGSSG-----SG-EKPFKCKECGKAFRQNIHLASHL 32
>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 55.6 bits (135), Expect = 5e-10
Identities = 15/37 (40%), Positives = 21/37 (56%)
Query: 1040 HTGERPYKCDVCGSSFKDKWYLGVHMRKHNGEKPYNC 1076
+GE+P++C+ CG F +L H R H GEKP
Sbjct: 7 GSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGP 43
Score = 47.5 bits (114), Expect = 3e-07
Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
Query: 1008 KHMLSHTGEKPFCCHICGK--SLKGNLKDHILKCHTGERPYKC 1048
S +GEKPF C CGK + +L H + HTGE+P
Sbjct: 2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSH-QRVHTGEKPSGP 43
Score = 41.4 bits (98), Expect = 6e-05
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Query: 1965 RHMLSHTGEKPFCCDICGK--SLKGNLKAHILRCQGERPYKC 2004
S +GEKPF C+ CGK + +L +H GE+P
Sbjct: 2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGP 43
Score = 40.2 bits (95), Expect = 1e-04
Identities = 12/35 (34%), Positives = 17/35 (48%)
Query: 1062 GVHMRKHNGEKPYNCDYCGQTFAARSTFTFHLKKH 1096
G +GEKP+ C+ CG+ F S H + H
Sbjct: 1 GSSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVH 35
Score = 38.3 bits (90), Expect = 7e-04
Identities = 12/36 (33%), Positives = 18/36 (50%), Gaps = 4/36 (11%)
Query: 1528 EHINTHTGNKPYQCQICNKSFGTRRNYRLHLKRHKR 1563
++ +G KP+QC+ C K F HL H+R
Sbjct: 2 SSGSSGSGEKPFQCEECGKRF----TQNSHLHSHQR 33
Score = 37.9 bits (89), Expect = 8e-04
Identities = 13/38 (34%), Positives = 18/38 (47%)
Query: 895 IKTIERKFECDYCKMKFKSKSFLSEHINTHTGNKPYQC 932
+ E+ F+C+ C +F S L H HTG KP
Sbjct: 6 SGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGP 43
Score = 37.9 bits (89), Expect = 8e-04
Identities = 13/31 (41%), Positives = 17/31 (54%)
Query: 1511 FECDFCKKKFYRNFDLQEHINTHTGNKPYQC 1541
F+C+ C K+F +N L H HTG KP
Sbjct: 13 FQCEECGKRFTQNSHLHSHQRVHTGEKPSGP 43
Score = 35.6 bits (83), Expect = 0.006
Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Query: 1998 GERPYKCDVCGSSFKDKKHFSVHIRNH-GE 2026
GE+P++C+ CG F H H R H GE
Sbjct: 9 GEKPFQCEECGKRFTQNSHLHSHQRVHTGE 38
Score = 33.7 bits (78), Expect = 0.026
Identities = 11/34 (32%), Positives = 16/34 (47%)
Query: 632 KKYECDSCNKKFWSKRALSEHMIIHTGIKEHQCH 665
K ++C+ C K+F L H +HTG K
Sbjct: 11 KPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPS 44
Score = 33.7 bits (78), Expect = 0.032
Identities = 13/36 (36%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Query: 1352 TGNK-FECIYCKKKYRRKFDLKEHINKHTGNKPYHC 1386
+G K F+C C K++ + L H HTG KP
Sbjct: 8 SGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGP 43
Score = 32.9 bits (76), Expect = 0.058
Identities = 8/21 (38%), Positives = 13/21 (61%)
Query: 919 EHINTHTGNKPYQCQICKKSF 939
++ +G KP+QC+ C K F
Sbjct: 2 SSGSSGSGEKPFQCEECGKRF 22
Score = 31.4 bits (72), Expect = 0.17
Identities = 10/44 (22%), Positives = 13/44 (29%), Gaps = 2/44 (4%)
Query: 651 EHMIIHTGIKEHQCHVCNTAFYHIRSLSRHLKIHEYNESKMYKC 694
+G K QC C F L H ++H K
Sbjct: 2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVH--TGEKPSGP 43
Score = 30.2 bits (69), Expect = 0.57
Identities = 12/30 (40%), Positives = 18/30 (60%)
Query: 592 VHSSIKRYMCDICGKQFTTLSYLDLHRKSH 621
S K + C+ CGK+FT S+L H++ H
Sbjct: 6 SGSGEKPFQCEECGKRFTQNSHLHSHQRVH 35
Score = 29.8 bits (68), Expect = 0.69
Identities = 13/36 (36%), Positives = 17/36 (47%), Gaps = 2/36 (5%)
Query: 989 GDKCHICKVCGAKI--KGNLQKHMLSHTGEKPFCCH 1022
G+K C+ CG + +L H HTGEKP
Sbjct: 9 GEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPS 44
Score = 27.1 bits (61), Expect = 6.5
Identities = 12/35 (34%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
Query: 1946 GDKCHVCKVCGAKI--KGNMKRHMLSHTGEKPFCC 1978
G+K C+ CG + ++ H HTGEKP
Sbjct: 9 GEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGP 43
Score = 26.7 bits (60), Expect = 8.2
Identities = 10/30 (33%), Positives = 15/30 (50%)
Query: 430 ECDYCKRKFTCKRYLAEHINAHTGNTIYGC 459
+C+ C ++FT +L H HTG G
Sbjct: 14 QCEECGKRFTQNSHLHSHQRVHTGEKPSGP 43
Score = 26.7 bits (60), Expect = 8.7
Identities = 11/37 (29%), Positives = 14/37 (37%), Gaps = 6/37 (16%)
Query: 381 AKHMRVHLRSVHNGKERKFICDICGKQFTSNIHASRH 417
E+ F C+ CGK+FT N H H
Sbjct: 1 GSSGSSGS------GEKPFQCEECGKRFTQNSHLHSH 31
>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 55.6 bits (135), Expect = 5e-10
Identities = 17/37 (45%), Positives = 20/37 (54%)
Query: 1040 HTGERPYKCDVCGSSFKDKWYLGVHMRKHNGEKPYNC 1076
+GE+PY CD CG +F L H R H GEKP
Sbjct: 7 GSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGP 43
Score = 47.5 bits (114), Expect = 3e-07
Identities = 17/43 (39%), Positives = 21/43 (48%), Gaps = 3/43 (6%)
Query: 1008 KHMLSHTGEKPFCCHICGK--SLKGNLKDHILKCHTGERPYKC 1048
S +GEKP+ C CGK L L H + HTGE+P
Sbjct: 2 SSGSSGSGEKPYVCDYCGKAFGLSAELVRH-QRIHTGEKPSGP 43
Score = 41.7 bits (99), Expect = 4e-05
Identities = 14/35 (40%), Positives = 18/35 (51%)
Query: 1062 GVHMRKHNGEKPYNCDYCGQTFAARSTFTFHLKKH 1096
G +GEKPY CDYCG+ F + H + H
Sbjct: 1 GSSGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIH 35
Score = 41.7 bits (99), Expect = 4e-05
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 6/44 (13%)
Query: 1965 RHMLSHTGEKPFCCDICGKSLKGNLKAHILRCQ----GERPYKC 2004
S +GEKP+ CD CGK+ L A ++R Q GE+P
Sbjct: 2 SSGSSGSGEKPYVCDYCGKAF--GLSAELVRHQRIHTGEKPSGP 43
Score = 37.9 bits (89), Expect = 8e-04
Identities = 13/38 (34%), Positives = 17/38 (44%)
Query: 895 IKTIERKFECDYCKMKFKSKSFLSEHINTHTGNKPYQC 932
+ E+ + CDYC F + L H HTG KP
Sbjct: 6 SGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGP 43
Score = 37.5 bits (88), Expect = 0.001
Identities = 12/35 (34%), Positives = 17/35 (48%), Gaps = 4/35 (11%)
Query: 1529 HINTHTGNKPYQCQICNKSFGTRRNYRLHLKRHKR 1563
++ +G KPY C C K+F L RH+R
Sbjct: 3 SGSSGSGEKPYVCDYCGKAF----GLSAELVRHQR 33
Score = 37.1 bits (87), Expect = 0.002
Identities = 12/31 (38%), Positives = 16/31 (51%)
Query: 1511 FECDFCKKKFYRNFDLQEHINTHTGNKPYQC 1541
+ CD+C K F + +L H HTG KP
Sbjct: 13 YVCDYCGKAFGLSAELVRHQRIHTGEKPSGP 43
Score = 35.2 bits (82), Expect = 0.009
Identities = 14/30 (46%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Query: 1998 GERPYKCDVCGSSFKDKKHFSVHIRNH-GE 2026
GE+PY CD CG +F H R H GE
Sbjct: 9 GEKPYVCDYCGKAFGLSAELVRHQRIHTGE 38
Score = 34.8 bits (81), Expect = 0.013
Identities = 14/33 (42%), Positives = 14/33 (42%)
Query: 632 KKYECDSCNKKFWSKRALSEHMIIHTGIKEHQC 664
K Y CD C K F L H IHTG K
Sbjct: 11 KPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGP 43
Score = 34.0 bits (79), Expect = 0.019
Identities = 13/36 (36%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Query: 1352 TGNK-FECIYCKKKYRRKFDLKEHINKHTGNKPYHC 1386
+G K + C YC K + +L H HTG KP
Sbjct: 8 SGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGP 43
Score = 33.6 bits (78), Expect = 0.032
Identities = 12/43 (27%), Positives = 15/43 (34%), Gaps = 2/43 (4%)
Query: 652 HMIIHTGIKEHQCHVCNTAFYHIRSLSRHLKIHEYNESKMYKC 694
+G K + C C AF L RH +IH K
Sbjct: 3 SGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIH--TGEKPSGP 43
Score = 32.1 bits (74), Expect = 0.092
Identities = 11/34 (32%), Positives = 17/34 (50%), Gaps = 4/34 (11%)
Query: 920 HINTHTGNKPYQCQICKKSFANKRSYQRDLKRHK 953
++ +G KPY C C K+F +L RH+
Sbjct: 3 SGSSGSGEKPYVCDYCGKAF----GLSAELVRHQ 32
Score = 30.2 bits (69), Expect = 0.46
Identities = 13/35 (37%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
Query: 989 GDKCHICKVCGA--KIKGNLQKHMLSHTGEKPFCC 1021
G+K ++C CG + L +H HTGEKP
Sbjct: 9 GEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGP 43
Score = 28.2 bits (64), Expect = 2.2
Identities = 12/34 (35%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 588 HLRHVHSSIKRYMCDICGKQFTTLSYLDLHRKSH 621
S K Y+CD CGK F + L H++ H
Sbjct: 3 SGS-SGSGEKPYVCDYCGKAFGLSAELVRHQRIH 35
Score = 27.5 bits (62), Expect = 4.7
Identities = 11/31 (35%), Positives = 12/31 (38%)
Query: 430 ECDYCKRKFTCKRYLAEHINAHTGNTIYGCR 460
CDYC + F L H HTG G
Sbjct: 14 VCDYCGKAFGLSAELVRHQRIHTGEKPSGPS 44
Score = 26.7 bits (60), Expect = 9.0
Identities = 10/33 (30%), Positives = 15/33 (45%), Gaps = 4/33 (12%)
Query: 1374 HINKHTGNKPYHCQICKESFYTLKTYRGDLKRH 1406
+ +G KPY C C ++F +L RH
Sbjct: 3 SGSSGSGEKPYVCDYCGKAF----GLSAELVRH 31
>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 46
Score = 55.6 bits (135), Expect = 5e-10
Identities = 13/37 (35%), Positives = 18/37 (48%)
Query: 1040 HTGERPYKCDVCGSSFKDKWYLGVHMRKHNGEKPYNC 1076
+ + ++C CG F K +L H R H GEKP
Sbjct: 7 GSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGP 43
Score = 47.9 bits (115), Expect = 3e-07
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 3/43 (6%)
Query: 1008 KHMLSHTGEKPFCCHICGK--SLKGNLKDHILKCHTGERPYKC 1048
S + K CH CG+ +LK +L H + HTGE+P
Sbjct: 2 SSGSSGSSTKSHQCHECGRGFTLKSHLNQH-QRIHTGEKPSGP 43
Score = 41.0 bits (97), Expect = 6e-05
Identities = 9/35 (25%), Positives = 17/35 (48%), Gaps = 4/35 (11%)
Query: 1529 HINTHTGNKPYQCQICNKSFGTRRNYRLHLKRHKR 1563
++ + K +QC C + F + HL +H+R
Sbjct: 3 SGSSGSSTKSHQCHECGRGF----TLKSHLNQHQR 33
Score = 40.6 bits (96), Expect = 9e-05
Identities = 9/35 (25%), Positives = 14/35 (40%)
Query: 1062 GVHMRKHNGEKPYNCDYCGQTFAARSTFTFHLKKH 1096
G + K + C CG+ F +S H + H
Sbjct: 1 GSSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIH 35
Score = 39.1 bits (92), Expect = 3e-04
Identities = 12/44 (27%), Positives = 18/44 (40%), Gaps = 6/44 (13%)
Query: 1965 RHMLSHTGEKPFCCDICGKSLKGNLKAHILRCQ----GERPYKC 2004
S + K C CG+ LK+H+ + Q GE+P
Sbjct: 2 SSGSSGSSTKSHQCHECGRGF--TLKSHLNQHQRIHTGEKPSGP 43
Score = 37.1 bits (87), Expect = 0.001
Identities = 11/30 (36%), Positives = 15/30 (50%), Gaps = 1/30 (3%)
Query: 1998 GERPYKCDVCGSSFKDKKHFSVHIRNH-GE 2026
+ ++C CG F K H + H R H GE
Sbjct: 9 STKSHQCHECGRGFTLKSHLNQHQRIHTGE 38
Score = 34.8 bits (81), Expect = 0.011
Identities = 12/36 (33%), Positives = 17/36 (47%)
Query: 897 TIERKFECDYCKMKFKSKSFLSEHINTHTGNKPYQC 932
+ + +C C F KS L++H HTG KP
Sbjct: 8 SSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGP 43
Score = 34.8 bits (81), Expect = 0.012
Identities = 10/31 (32%), Positives = 13/31 (41%)
Query: 1511 FECDFCKKKFYRNFDLQEHINTHTGNKPYQC 1541
+C C + F L +H HTG KP
Sbjct: 13 HQCHECGRGFTLKSHLNQHQRIHTGEKPSGP 43
Score = 34.1 bits (79), Expect = 0.018
Identities = 11/33 (33%), Positives = 15/33 (45%)
Query: 652 HMIIHTGIKEHQCHVCNTAFYHIRSLSRHLKIH 684
+ K HQCH C F L++H +IH
Sbjct: 3 SGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIH 35
Score = 34.1 bits (79), Expect = 0.019
Identities = 6/23 (26%), Positives = 11/23 (47%)
Query: 920 HINTHTGNKPYQCQICKKSFANK 942
++ + K +QC C + F K
Sbjct: 3 SGSSGSSTKSHQCHECGRGFTLK 25
Score = 33.3 bits (77), Expect = 0.040
Identities = 12/33 (36%), Positives = 17/33 (51%)
Query: 632 KKYECDSCNKKFWSKRALSEHMIIHTGIKEHQC 664
K ++C C + F K L++H IHTG K
Sbjct: 11 KSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGP 43
Score = 32.9 bits (76), Expect = 0.050
Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
Query: 989 GDKCHICKVCGA--KIKGNLQKHMLSHTGEKPFCC 1021
K H C CG +K +L +H HTGEKP
Sbjct: 9 STKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGP 43
Score = 32.1 bits (74), Expect = 0.088
Identities = 11/36 (30%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
Query: 1352 TGNK-FECIYCKKKYRRKFDLKEHINKHTGNKPYHC 1386
+ K +C C + + K L +H HTG KP
Sbjct: 8 SSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGP 43
Score = 31.4 bits (72), Expect = 0.18
Identities = 12/29 (41%), Positives = 18/29 (62%)
Query: 593 HSSIKRYMCDICGKQFTTLSYLDLHRKSH 621
SS K + C CG+ FT S+L+ H++ H
Sbjct: 7 GSSTKSHQCHECGRGFTLKSHLNQHQRIH 35
Score = 30.6 bits (70), Expect = 0.41
Identities = 13/35 (37%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
Query: 1946 GDKCHVCKVCGA--KIKGNMKRHMLSHTGEKPFCC 1978
K H C CG +K ++ +H HTGEKP
Sbjct: 9 STKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGP 43
Score = 29.4 bits (67), Expect = 1.1
Identities = 7/33 (21%), Positives = 12/33 (36%), Gaps = 4/33 (12%)
Query: 1374 HINKHTGNKPYHCQICKESFYTLKTYRGDLKRH 1406
+ + K + C C F T + L +H
Sbjct: 3 SGSSGSSTKSHQCHECGRGF----TLKSHLNQH 31
Score = 28.3 bits (64), Expect = 2.6
Identities = 12/30 (40%), Positives = 15/30 (50%)
Query: 430 ECDYCKRKFTCKRYLAEHINAHTGNTIYGC 459
+C C R FT K +L +H HTG G
Sbjct: 14 QCHECGRGFTLKSHLNQHQRIHTGEKPSGP 43
Score = 27.1 bits (61), Expect = 7.0
Identities = 8/29 (27%), Positives = 13/29 (44%), Gaps = 1/29 (3%)
Query: 389 RSVHNGKERKFICDICGKQFTSNIHASRH 417
S + + C CG+ FT H ++H
Sbjct: 4 GSSGSS-TKSHQCHECGRGFTLKSHLNQH 31
>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national
project on protein structural and functional analyses;
NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 55.6 bits (135), Expect = 5e-10
Identities = 15/37 (40%), Positives = 21/37 (56%)
Query: 1040 HTGERPYKCDVCGSSFKDKWYLGVHMRKHNGEKPYNC 1076
TGE+PY+C+ CG +F + L H H G+KP
Sbjct: 7 GTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGP 43
Score = 47.1 bits (113), Expect = 5e-07
Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Query: 1008 KHMLSHTGEKPFCCHICGK--SLKGNLKDHILKCHTGERPYKC 1048
S TGEKP+ C+ CGK S++ +L H HTG++P
Sbjct: 2 SSGSSGTGEKPYECNQCGKAFSVRSSLTTH-QAIHTGKKPSGP 43
Score = 42.5 bits (101), Expect = 2e-05
Identities = 15/35 (42%), Positives = 19/35 (54%)
Query: 1062 GVHMRKHNGEKPYNCDYCGQTFAARSTFTFHLKKH 1096
G GEKPY C+ CG+ F+ RS+ T H H
Sbjct: 1 GSSGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIH 35
Score = 41.0 bits (97), Expect = 8e-05
Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Query: 1965 RHMLSHTGEKPFCCDICGK--SLKGNLKAHILRCQGERPYKC 2004
S TGEKP+ C+ CGK S++ +L H G++P
Sbjct: 2 SSGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGP 43
Score = 38.7 bits (91), Expect = 5e-04
Identities = 14/38 (36%), Positives = 19/38 (50%)
Query: 895 IKTIERKFECDYCKMKFKSKSFLSEHINTHTGNKPYQC 932
T E+ +EC+ C F +S L+ H HTG KP
Sbjct: 6 SGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGP 43
Score = 36.7 bits (86), Expect = 0.002
Identities = 12/31 (38%), Positives = 14/31 (45%)
Query: 1511 FECDFCKKKFYRNFDLQEHINTHTGNKPYQC 1541
+EC+ C K F L H HTG KP
Sbjct: 13 YECNQCGKAFSVRSSLTTHQAIHTGKKPSGP 43
Score = 36.0 bits (84), Expect = 0.005
Identities = 12/35 (34%), Positives = 18/35 (51%), Gaps = 4/35 (11%)
Query: 1529 HINTHTGNKPYQCQICNKSFGTRRNYRLHLKRHKR 1563
++ TG KPY+C C K+F + R L H+
Sbjct: 3 SGSSGTGEKPYECNQCGKAF----SVRSSLTTHQA 33
Score = 35.2 bits (82), Expect = 0.009
Identities = 14/33 (42%), Positives = 18/33 (54%)
Query: 632 KKYECDSCNKKFWSKRALSEHMIIHTGIKEHQC 664
K YEC+ C K F + +L+ H IHTG K
Sbjct: 11 KPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGP 43
Score = 34.4 bits (80), Expect = 0.016
Identities = 11/30 (36%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Query: 1998 GERPYKCDVCGSSFKDKKHFSVHIRNH-GE 2026
GE+PY+C+ CG +F + + H H G+
Sbjct: 9 GEKPYECNQCGKAFSVRSSLTTHQAIHTGK 38
Score = 33.3 bits (77), Expect = 0.041
Identities = 13/45 (28%), Positives = 18/45 (40%), Gaps = 6/45 (13%)
Query: 652 HMIIHTGIKEHQCHVCNTAFYHIRSLSRHLKIH--EYNESKMYKC 694
TG K ++C+ C AF SL+ H IH + K
Sbjct: 3 SGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGK----KPSGP 43
Score = 32.9 bits (76), Expect = 0.050
Identities = 14/36 (38%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Query: 1352 TGNK-FECIYCKKKYRRKFDLKEHINKHTGNKPYHC 1386
TG K +EC C K + + L H HTG KP
Sbjct: 8 TGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGP 43
Score = 31.7 bits (73), Expect = 0.15
Identities = 10/25 (40%), Positives = 16/25 (64%)
Query: 920 HINTHTGNKPYQCQICKKSFANKRS 944
++ TG KPY+C C K+F+ + S
Sbjct: 3 SGSSGTGEKPYECNQCGKAFSVRSS 27
Score = 30.2 bits (69), Expect = 0.52
Identities = 12/35 (34%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
Query: 989 GDKCHICKVCGA--KIKGNLQKHMLSHTGEKPFCC 1021
G+K + C CG ++ +L H HTG+KP
Sbjct: 9 GEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGP 43
Score = 27.5 bits (62), Expect = 3.9
Identities = 10/30 (33%), Positives = 14/30 (46%)
Query: 430 ECDYCKRKFTCKRYLAEHINAHTGNTIYGC 459
EC+ C + F+ + L H HTG G
Sbjct: 14 ECNQCGKAFSVRSSLTTHQAIHTGKKPSGP 43
Score = 27.5 bits (62), Expect = 5.3
Identities = 11/35 (31%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
Query: 1946 GDKCHVCKVCGA--KIKGNMKRHMLSHTGEKPFCC 1978
G+K + C CG ++ ++ H HTG+KP
Sbjct: 9 GEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGP 43
Score = 27.1 bits (61), Expect = 6.0
Identities = 11/34 (32%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
Query: 588 HLRHVHSSIKRYMCDICGKQFTTLSYLDLHRKSH 621
+ K Y C+ CGK F+ S L H+ H
Sbjct: 3 SGS-SGTGEKPYECNQCGKAFSVRSSLTTHQAIH 35
Score = 26.7 bits (60), Expect = 9.4
Identities = 11/30 (36%), Positives = 15/30 (50%), Gaps = 4/30 (13%)
Query: 1378 HTGNKPYHCQICKESFYTLKTYRGDLKRHE 1407
TG KPY C C ++F + R L H+
Sbjct: 7 GTGEKPYECNQCGKAF----SVRSSLTTHQ 32
>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 55.2 bits (134), Expect = 6e-10
Identities = 17/37 (45%), Positives = 21/37 (56%)
Query: 1040 HTGERPYKCDVCGSSFKDKWYLGVHMRKHNGEKPYNC 1076
+GE+PYKC+ CG F +L H R H GEKP
Sbjct: 7 GSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGP 43
Score = 46.7 bits (112), Expect = 8e-07
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 3/42 (7%)
Query: 1009 HMLSHTGEKPFCCHICGK--SLKGNLKDHILKCHTGERPYKC 1048
S +GEKP+ C+ CGK + +L +H + HTGE+P
Sbjct: 3 SGSSGSGEKPYKCNECGKVFTQNSHLTNH-WRIHTGEKPSGP 43
Score = 41.7 bits (99), Expect = 4e-05
Identities = 13/44 (29%), Positives = 19/44 (43%), Gaps = 6/44 (13%)
Query: 1965 RHMLSHTGEKPFCCDICGKSLKGNLKAHILRCQ----GERPYKC 2004
S +GEKP+ C+ CGK +H+ GE+P
Sbjct: 2 SSGSSGSGEKPYKCNECGKVF--TQNSHLTNHWRIHTGEKPSGP 43
Score = 40.2 bits (95), Expect = 1e-04
Identities = 14/35 (40%), Positives = 18/35 (51%)
Query: 1062 GVHMRKHNGEKPYNCDYCGQTFAARSTFTFHLKKH 1096
G +GEKPY C+ CG+ F S T H + H
Sbjct: 1 GSSGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIH 35
Score = 38.2 bits (90), Expect = 6e-04
Identities = 12/35 (34%), Positives = 16/35 (45%), Gaps = 4/35 (11%)
Query: 1529 HINTHTGNKPYQCQICNKSFGTRRNYRLHLKRHKR 1563
++ +G KPY+C C K F HL H R
Sbjct: 3 SGSSGSGEKPYKCNECGKVF----TQNSHLTNHWR 33
Score = 37.5 bits (88), Expect = 0.001
Identities = 12/38 (31%), Positives = 18/38 (47%)
Query: 895 IKTIERKFECDYCKMKFKSKSFLSEHINTHTGNKPYQC 932
+ E+ ++C+ C F S L+ H HTG KP
Sbjct: 6 SGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGP 43
Score = 37.1 bits (87), Expect = 0.002
Identities = 12/31 (38%), Positives = 16/31 (51%)
Query: 1511 FECDFCKKKFYRNFDLQEHINTHTGNKPYQC 1541
++C+ C K F +N L H HTG KP
Sbjct: 13 YKCNECGKVFTQNSHLTNHWRIHTGEKPSGP 43
Score = 35.2 bits (82), Expect = 0.008
Identities = 15/30 (50%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Query: 1998 GERPYKCDVCGSSFKDKKHFSVHIRNH-GE 2026
GE+PYKC+ CG F H + H R H GE
Sbjct: 9 GEKPYKCNECGKVFTQNSHLTNHWRIHTGE 38
Score = 34.0 bits (79), Expect = 0.021
Identities = 13/33 (39%), Positives = 16/33 (48%)
Query: 632 KKYECDSCNKKFWSKRALSEHMIIHTGIKEHQC 664
K Y+C+ C K F L+ H IHTG K
Sbjct: 11 KPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGP 43
Score = 33.2 bits (77), Expect = 0.040
Identities = 10/43 (23%), Positives = 16/43 (37%), Gaps = 2/43 (4%)
Query: 652 HMIIHTGIKEHQCHVCNTAFYHIRSLSRHLKIHEYNESKMYKC 694
+G K ++C+ C F L+ H +IH K
Sbjct: 3 SGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIH--TGEKPSGP 43
Score = 32.5 bits (75), Expect = 0.067
Identities = 12/36 (33%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Query: 1352 TGNK-FECIYCKKKYRRKFDLKEHINKHTGNKPYHC 1386
+G K ++C C K + + L H HTG KP
Sbjct: 8 SGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGP 43
Score = 31.7 bits (73), Expect = 0.14
Identities = 11/34 (32%), Positives = 17/34 (50%), Gaps = 4/34 (11%)
Query: 920 HINTHTGNKPYQCQICKKSFANKRSYQRDLKRHK 953
++ +G KPY+C C K F + S+ L H
Sbjct: 3 SGSSGSGEKPYKCNECGKVF-TQNSH---LTNHW 32
Score = 28.2 bits (64), Expect = 2.5
Identities = 13/34 (38%), Positives = 16/34 (47%), Gaps = 2/34 (5%)
Query: 590 RH--VHSSIKRYMCDICGKQFTTLSYLDLHRKSH 621
S K Y C+ CGK FT S+L H + H
Sbjct: 2 SSGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIH 35
Score = 27.8 bits (63), Expect = 3.9
Identities = 13/35 (37%), Positives = 16/35 (45%), Gaps = 2/35 (5%)
Query: 989 GDKCHICKVCGAKI--KGNLQKHMLSHTGEKPFCC 1021
G+K + C CG +L H HTGEKP
Sbjct: 9 GEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGP 43
>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 55.2 bits (134), Expect = 7e-10
Identities = 18/37 (48%), Positives = 21/37 (56%)
Query: 1040 HTGERPYKCDVCGSSFKDKWYLGVHMRKHNGEKPYNC 1076
TGE+PYKC+ CG +F L H R H GEKP
Sbjct: 7 GTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGP 43
Score = 47.9 bits (115), Expect = 3e-07
Identities = 18/43 (41%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
Query: 1008 KHMLSHTGEKPFCCHICGK--SLKGNLKDHILKCHTGERPYKC 1048
S TGEKP+ C+ CGK S L H + HTGE+P
Sbjct: 2 SSGSSGTGEKPYKCNECGKAFSQTSKLARH-QRIHTGEKPSGP 43
Score = 41.4 bits (98), Expect = 5e-05
Identities = 16/42 (38%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Query: 1965 RHMLSHTGEKPFCCDICGK--SLKGNLKAHILRCQGERPYKC 2004
S TGEKP+ C+ CGK S L H GE+P
Sbjct: 2 SSGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGP 43
Score = 41.0 bits (97), Expect = 8e-05
Identities = 13/35 (37%), Positives = 17/35 (48%)
Query: 1062 GVHMRKHNGEKPYNCDYCGQTFAARSTFTFHLKKH 1096
G GEKPY C+ CG+ F+ S H + H
Sbjct: 1 GSSGSSGTGEKPYKCNECGKAFSQTSKLARHQRIH 35
Score = 37.1 bits (87), Expect = 0.002
Identities = 13/38 (34%), Positives = 18/38 (47%)
Query: 895 IKTIERKFECDYCKMKFKSKSFLSEHINTHTGNKPYQC 932
T E+ ++C+ C F S L+ H HTG KP
Sbjct: 6 SGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGP 43
Score = 37.1 bits (87), Expect = 0.002
Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 4/35 (11%)
Query: 1529 HINTHTGNKPYQCQICNKSFGTRRNYRLHLKRHKR 1563
++ TG KPY+C C K+F + L RH+R
Sbjct: 3 SGSSGTGEKPYKCNECGKAF----SQTSKLARHQR 33
Score = 36.3 bits (85), Expect = 0.003
Identities = 11/31 (35%), Positives = 15/31 (48%)
Query: 1511 FECDFCKKKFYRNFDLQEHINTHTGNKPYQC 1541
++C+ C K F + L H HTG KP
Sbjct: 13 YKCNECGKAFSQTSKLARHQRIHTGEKPSGP 43
Score = 34.4 bits (80), Expect = 0.017
Identities = 14/30 (46%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Query: 1998 GERPYKCDVCGSSFKDKKHFSVHIRNH-GE 2026
GE+PYKC+ CG +F + H R H GE
Sbjct: 9 GEKPYKCNECGKAFSQTSKLARHQRIHTGE 38
Score = 34.0 bits (79), Expect = 0.021
Identities = 13/33 (39%), Positives = 16/33 (48%)
Query: 632 KKYECDSCNKKFWSKRALSEHMIIHTGIKEHQC 664
K Y+C+ C K F L+ H IHTG K
Sbjct: 11 KPYKCNECGKAFSQTSKLARHQRIHTGEKPSGP 43
Score = 32.9 bits (76), Expect = 0.054
Identities = 13/43 (30%), Positives = 18/43 (41%), Gaps = 2/43 (4%)
Query: 652 HMIIHTGIKEHQCHVCNTAFYHIRSLSRHLKIHEYNESKMYKC 694
TG K ++C+ C AF L+RH +IH K
Sbjct: 3 SGSSGTGEKPYKCNECGKAFSQTSKLARHQRIH--TGEKPSGP 43
Score = 32.1 bits (74), Expect = 0.10
Identities = 13/36 (36%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Query: 1352 TGNK-FECIYCKKKYRRKFDLKEHINKHTGNKPYHC 1386
TG K ++C C K + + L H HTG KP
Sbjct: 8 TGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGP 43
Score = 31.3 bits (72), Expect = 0.20
Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 4/34 (11%)
Query: 920 HINTHTGNKPYQCQICKKSFANKRSYQRDLKRHK 953
++ TG KPY+C C K+F S L RH+
Sbjct: 3 SGSSGTGEKPYKCNECGKAF----SQTSKLARHQ 32
Score = 29.0 bits (66), Expect = 1.5
Identities = 13/35 (37%), Positives = 16/35 (45%), Gaps = 2/35 (5%)
Query: 989 GDKCHICKVCGA--KIKGNLQKHMLSHTGEKPFCC 1021
G+K + C CG L +H HTGEKP
Sbjct: 9 GEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGP 43
Score = 27.9 bits (63), Expect = 3.4
Identities = 11/34 (32%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 588 HLRHVHSSIKRYMCDICGKQFTTLSYLDLHRKSH 621
+ K Y C+ CGK F+ S L H++ H
Sbjct: 3 SGS-SGTGEKPYKCNECGKAFSQTSKLARHQRIH 35
Score = 26.7 bits (60), Expect = 8.1
Identities = 13/35 (37%), Positives = 16/35 (45%), Gaps = 2/35 (5%)
Query: 1946 GDKCHVCKVCGA--KIKGNMKRHMLSHTGEKPFCC 1978
G+K + C CG + RH HTGEKP
Sbjct: 9 GEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGP 43
>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A
Length = 46
Score = 55.2 bits (134), Expect = 7e-10
Identities = 17/37 (45%), Positives = 21/37 (56%)
Query: 1040 HTGERPYKCDVCGSSFKDKWYLGVHMRKHNGEKPYNC 1076
TGE+PY+C CG +F +L H R H GEKP
Sbjct: 7 GTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGP 43
Score = 47.1 bits (113), Expect = 5e-07
Identities = 18/43 (41%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
Query: 1008 KHMLSHTGEKPFCCHICGK--SLKGNLKDHILKCHTGERPYKC 1048
S TGEKP+ C CGK S +L H + HTGE+P
Sbjct: 2 SSGSSGTGEKPYECKECGKAFSQTTHLIQH-QRVHTGEKPSGP 43
Score = 41.0 bits (97), Expect = 8e-05
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 6/44 (13%)
Query: 1965 RHMLSHTGEKPFCCDICGKSLKGNLKAHILRCQ----GERPYKC 2004
S TGEKP+ C CGK+ + H+++ Q GE+P
Sbjct: 2 SSGSSGTGEKPYECKECGKAF--SQTTHLIQHQRVHTGEKPSGP 43
Score = 39.8 bits (94), Expect = 2e-04
Identities = 12/35 (34%), Positives = 16/35 (45%)
Query: 1062 GVHMRKHNGEKPYNCDYCGQTFAARSTFTFHLKKH 1096
G GEKPY C CG+ F+ + H + H
Sbjct: 1 GSSGSSGTGEKPYECKECGKAFSQTTHLIQHQRVH 35
Score = 37.5 bits (88), Expect = 0.001
Identities = 13/38 (34%), Positives = 17/38 (44%)
Query: 895 IKTIERKFECDYCKMKFKSKSFLSEHINTHTGNKPYQC 932
T E+ +EC C F + L +H HTG KP
Sbjct: 6 SGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGP 43
Score = 37.1 bits (87), Expect = 0.002
Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 4/35 (11%)
Query: 1529 HINTHTGNKPYQCQICNKSFGTRRNYRLHLKRHKR 1563
++ TG KPY+C+ C K+F + HL +H+R
Sbjct: 3 SGSSGTGEKPYECKECGKAF----SQTTHLIQHQR 33
Score = 36.7 bits (86), Expect = 0.003
Identities = 12/31 (38%), Positives = 15/31 (48%)
Query: 1511 FECDFCKKKFYRNFDLQEHINTHTGNKPYQC 1541
+EC C K F + L +H HTG KP
Sbjct: 13 YECKECGKAFSQTTHLIQHQRVHTGEKPSGP 43
Score = 34.4 bits (80), Expect = 0.015
Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Query: 1998 GERPYKCDVCGSSFKDKKHFSVHIRNH-GE 2026
GE+PY+C CG +F H H R H GE
Sbjct: 9 GEKPYECKECGKAFSQTTHLIQHQRVHTGE 38
Score = 34.0 bits (79), Expect = 0.020
Identities = 13/33 (39%), Positives = 15/33 (45%)
Query: 632 KKYECDSCNKKFWSKRALSEHMIIHTGIKEHQC 664
K YEC C K F L +H +HTG K
Sbjct: 11 KPYECKECGKAFSQTTHLIQHQRVHTGEKPSGP 43
Score = 33.6 bits (78), Expect = 0.026
Identities = 14/36 (38%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Query: 1352 TGNK-FECIYCKKKYRRKFDLKEHINKHTGNKPYHC 1386
TG K +EC C K + + L +H HTG KP
Sbjct: 8 TGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGP 43
Score = 33.2 bits (77), Expect = 0.043
Identities = 11/43 (25%), Positives = 16/43 (37%), Gaps = 2/43 (4%)
Query: 652 HMIIHTGIKEHQCHVCNTAFYHIRSLSRHLKIHEYNESKMYKC 694
TG K ++C C AF L +H ++H K
Sbjct: 3 SGSSGTGEKPYECKECGKAFSQTTHLIQHQRVH--TGEKPSGP 43
Score = 31.7 bits (73), Expect = 0.14
Identities = 9/20 (45%), Positives = 14/20 (70%)
Query: 920 HINTHTGNKPYQCQICKKSF 939
++ TG KPY+C+ C K+F
Sbjct: 3 SGSSGTGEKPYECKECGKAF 22
Score = 29.8 bits (68), Expect = 0.65
Identities = 14/43 (32%), Positives = 19/43 (44%), Gaps = 2/43 (4%)
Query: 981 AKHMNWVHGDKCHICKVCGAKI--KGNLQKHMLSHTGEKPFCC 1021
+ G+K + CK CG +L +H HTGEKP
Sbjct: 1 GSSGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGP 43
Score = 27.9 bits (63), Expect = 4.0
Identities = 12/51 (23%), Positives = 19/51 (37%), Gaps = 8/51 (15%)
Query: 588 HLRHVHSSIKRYMCDICGKQFTTLSYLDLHRKSHNETVKRKEEDKKYECDS 638
+ K Y C CGK F+ ++L H++ H +K S
Sbjct: 3 SGS-SGTGEKPYECKECGKAFSQTTHLIQHQRVHT-------GEKPSGPSS 45
Score = 27.5 bits (62), Expect = 4.7
Identities = 13/35 (37%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
Query: 1946 GDKCHVCKVCGAKI--KGNMKRHMLSHTGEKPFCC 1978
G+K + CK CG ++ +H HTGEKP
Sbjct: 9 GEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGP 43
>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national
project on protein structural and functional analyses;
NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 55.2 bits (134), Expect = 7e-10
Identities = 16/37 (43%), Positives = 20/37 (54%)
Query: 1040 HTGERPYKCDVCGSSFKDKWYLGVHMRKHNGEKPYNC 1076
TG +PY+C+ CG +F L H R H GEKP
Sbjct: 7 GTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGP 43
Score = 47.5 bits (114), Expect = 4e-07
Identities = 17/43 (39%), Positives = 21/43 (48%), Gaps = 3/43 (6%)
Query: 1008 KHMLSHTGEKPFCCHICGK--SLKGNLKDHILKCHTGERPYKC 1048
S TG KP+ C+ CGK S L H + HTGE+P
Sbjct: 2 SSGSSGTGGKPYQCNECGKAFSQTSKLARH-QRVHTGEKPSGP 43
Score = 41.4 bits (98), Expect = 5e-05
Identities = 12/35 (34%), Positives = 16/35 (45%)
Query: 1062 GVHMRKHNGEKPYNCDYCGQTFAARSTFTFHLKKH 1096
G G KPY C+ CG+ F+ S H + H
Sbjct: 1 GSSGSSGTGGKPYQCNECGKAFSQTSKLARHQRVH 35
Score = 39.4 bits (93), Expect = 2e-04
Identities = 15/41 (36%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 1966 HMLSHTGEKPFCCDICGK--SLKGNLKAHILRCQGERPYKC 2004
S TG KP+ C+ CGK S L H GE+P
Sbjct: 3 SGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGP 43
Score = 37.5 bits (88), Expect = 0.001
Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 4/35 (11%)
Query: 1529 HINTHTGNKPYQCQICNKSFGTRRNYRLHLKRHKR 1563
++ TG KPYQC C K+F + L RH+R
Sbjct: 3 SGSSGTGGKPYQCNECGKAF----SQTSKLARHQR 33
Score = 37.5 bits (88), Expect = 0.001
Identities = 12/38 (31%), Positives = 17/38 (44%)
Query: 895 IKTIERKFECDYCKMKFKSKSFLSEHINTHTGNKPYQC 932
T + ++C+ C F S L+ H HTG KP
Sbjct: 6 SGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGP 43
Score = 36.4 bits (85), Expect = 0.004
Identities = 11/31 (35%), Positives = 15/31 (48%)
Query: 1511 FECDFCKKKFYRNFDLQEHINTHTGNKPYQC 1541
++C+ C K F + L H HTG KP
Sbjct: 13 YQCNECGKAFSQTSKLARHQRVHTGEKPSGP 43
Score = 34.8 bits (81), Expect = 0.011
Identities = 12/33 (36%), Positives = 16/33 (48%)
Query: 632 KKYECDSCNKKFWSKRALSEHMIIHTGIKEHQC 664
K Y+C+ C K F L+ H +HTG K
Sbjct: 11 KPYQCNECGKAFSQTSKLARHQRVHTGEKPSGP 43
Score = 34.4 bits (80), Expect = 0.016
Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Query: 1998 GERPYKCDVCGSSFKDKKHFSVHIRNH-GE 2026
G +PY+C+ CG +F + H R H GE
Sbjct: 9 GGKPYQCNECGKAFSQTSKLARHQRVHTGE 38
Score = 33.7 bits (78), Expect = 0.034
Identities = 13/43 (30%), Positives = 18/43 (41%), Gaps = 2/43 (4%)
Query: 652 HMIIHTGIKEHQCHVCNTAFYHIRSLSRHLKIHEYNESKMYKC 694
TG K +QC+ C AF L+RH ++H K
Sbjct: 3 SGSSGTGGKPYQCNECGKAFSQTSKLARHQRVH--TGEKPSGP 43
Score = 32.1 bits (74), Expect = 0.12
Identities = 13/36 (36%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Query: 1352 TGNK-FECIYCKKKYRRKFDLKEHINKHTGNKPYHC 1386
TG K ++C C K + + L H HTG KP
Sbjct: 8 TGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGP 43
Score = 31.7 bits (73), Expect = 0.13
Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 4/34 (11%)
Query: 920 HINTHTGNKPYQCQICKKSFANKRSYQRDLKRHK 953
++ TG KPYQC C K+F S L RH+
Sbjct: 3 SGSSGTGGKPYQCNECGKAF----SQTSKLARHQ 32
Score = 29.0 bits (66), Expect = 1.1
Identities = 13/35 (37%), Positives = 15/35 (42%), Gaps = 2/35 (5%)
Query: 989 GDKCHICKVCGAKI--KGNLQKHMLSHTGEKPFCC 1021
G K + C CG L +H HTGEKP
Sbjct: 9 GGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGP 43
Score = 27.1 bits (61), Expect = 5.4
Identities = 13/35 (37%), Positives = 15/35 (42%), Gaps = 2/35 (5%)
Query: 1946 GDKCHVCKVCGAKI--KGNMKRHMLSHTGEKPFCC 1978
G K + C CG + RH HTGEKP
Sbjct: 9 GGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGP 43
Score = 26.7 bits (60), Expect = 7.6
Identities = 13/51 (25%), Positives = 19/51 (37%), Gaps = 8/51 (15%)
Query: 588 HLRHVHSSIKRYMCDICGKQFTTLSYLDLHRKSHNETVKRKEEDKKYECDS 638
+ K Y C+ CGK F+ S L H++ H +K S
Sbjct: 3 SGS-SGTGGKPYQCNECGKAFSQTSKLARHQRVHT-------GEKPSGPSS 45
>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 55.2 bits (134), Expect = 7e-10
Identities = 14/37 (37%), Positives = 19/37 (51%)
Query: 1040 HTGERPYKCDVCGSSFKDKWYLGVHMRKHNGEKPYNC 1076
TGE+PY C CG +F + L H + H +KP
Sbjct: 7 GTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGP 43
Score = 49.0 bits (118), Expect = 9e-08
Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Query: 1009 HMLSHTGEKPFCCHICGK--SLKGNLKDHILKCHTGERPYKC 1048
S TGEKP+ C CGK +++ NL H K HT ++P
Sbjct: 3 SGSSGTGEKPYICAECGKAFTIRSNLIKH-QKIHTKQKPSGP 43
Score = 42.1 bits (100), Expect = 3e-05
Identities = 15/35 (42%), Positives = 16/35 (45%)
Query: 1062 GVHMRKHNGEKPYNCDYCGQTFAARSTFTFHLKKH 1096
G GEKPY C CG+ F RS H K H
Sbjct: 1 GSSGSSGTGEKPYICAECGKAFTIRSNLIKHQKIH 35
Score = 41.3 bits (98), Expect = 5e-05
Identities = 14/41 (34%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Query: 1966 HMLSHTGEKPFCCDICGK--SLKGNLKAHILRCQGERPYKC 2004
S TGEKP+ C CGK +++ NL H ++P
Sbjct: 3 SGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGP 43
Score = 36.7 bits (86), Expect = 0.002
Identities = 12/38 (31%), Positives = 16/38 (42%)
Query: 895 IKTIERKFECDYCKMKFKSKSFLSEHINTHTGNKPYQC 932
T E+ + C C F +S L +H HT KP
Sbjct: 6 SGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGP 43
Score = 36.3 bits (85), Expect = 0.003
Identities = 12/35 (34%), Positives = 19/35 (54%), Gaps = 4/35 (11%)
Query: 1529 HINTHTGNKPYQCQICNKSFGTRRNYRLHLKRHKR 1563
++ TG KPY C C K+F R +L +H++
Sbjct: 3 SGSSGTGEKPYICAECGKAF----TIRSNLIKHQK 33
Score = 36.0 bits (84), Expect = 0.004
Identities = 10/31 (32%), Positives = 13/31 (41%)
Query: 1511 FECDFCKKKFYRNFDLQEHINTHTGNKPYQC 1541
+ C C K F +L +H HT KP
Sbjct: 13 YICAECGKAFTIRSNLIKHQKIHTKQKPSGP 43
Score = 34.4 bits (80), Expect = 0.014
Identities = 10/30 (33%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Query: 1998 GERPYKCDVCGSSFKDKKHFSVHIRNH-GE 2026
GE+PY C CG +F + + H + H +
Sbjct: 9 GEKPYICAECGKAFTIRSNLIKHQKIHTKQ 38
Score = 33.6 bits (78), Expect = 0.030
Identities = 12/36 (33%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Query: 1352 TGNK-FECIYCKKKYRRKFDLKEHINKHTGNKPYHC 1386
TG K + C C K + + +L +H HT KP
Sbjct: 8 TGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGP 43
Score = 33.6 bits (78), Expect = 0.031
Identities = 12/33 (36%), Positives = 14/33 (42%)
Query: 632 KKYECDSCNKKFWSKRALSEHMIIHTGIKEHQC 664
K Y C C K F + L +H IHT K
Sbjct: 11 KPYICAECGKAFTIRSNLIKHQKIHTKQKPSGP 43
Score = 32.9 bits (76), Expect = 0.047
Identities = 13/45 (28%), Positives = 17/45 (37%), Gaps = 6/45 (13%)
Query: 652 HMIIHTGIKEHQCHVCNTAFYHIRSLSRHLKIH--EYNESKMYKC 694
TG K + C C AF +L +H KIH + K
Sbjct: 3 SGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQ----KPSGP 43
Score = 32.1 bits (74), Expect = 0.12
Identities = 11/33 (33%), Positives = 18/33 (54%), Gaps = 4/33 (12%)
Query: 920 HINTHTGNKPYQCQICKKSFANKRSYQRDLKRH 952
++ TG KPY C C K+F + + +L +H
Sbjct: 3 SGSSGTGEKPYICAECGKAF----TIRSNLIKH 31
Score = 31.7 bits (73), Expect = 0.12
Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Query: 989 GDKCHICKVCGA--KIKGNLQKHMLSHTGEKPFCC 1021
G+K +IC CG I+ NL KH HT +KP
Sbjct: 9 GEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGP 43
Score = 29.8 bits (68), Expect = 0.73
Identities = 12/35 (34%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Query: 1946 GDKCHVCKVCGA--KIKGNMKRHMLSHTGEKPFCC 1978
G+K ++C CG I+ N+ +H HT +KP
Sbjct: 9 GEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGP 43
Score = 28.6 bits (65), Expect = 1.5
Identities = 13/34 (38%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 588 HLRHVHSSIKRYMCDICGKQFTTLSYLDLHRKSH 621
+ K Y+C CGK FT S L H+K H
Sbjct: 3 SGS-SGTGEKPYICAECGKAFTIRSNLIKHQKIH 35
Score = 28.2 bits (64), Expect = 2.7
Identities = 12/33 (36%), Positives = 17/33 (51%), Gaps = 4/33 (12%)
Query: 1374 HINKHTGNKPYHCQICKESFYTLKTYRGDLKRH 1406
+ TG KPY C C ++F T R +L +H
Sbjct: 3 SGSSGTGEKPYICAECGKAF----TIRSNLIKH 31
Score = 26.7 bits (60), Expect = 8.7
Identities = 9/30 (30%), Positives = 12/30 (40%)
Query: 430 ECDYCKRKFTCKRYLAEHINAHTGNTIYGC 459
C C + FT + L +H HT G
Sbjct: 14 ICAECGKAFTIRSNLIKHQKIHTKQKPSGP 43
>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 44
Score = 54.8 bits (133), Expect = 9e-10
Identities = 15/37 (40%), Positives = 21/37 (56%)
Query: 1040 HTGERPYKCDVCGSSFKDKWYLGVHMRKHNGEKPYNC 1076
+GE+PY+C+ CG +F K L VH R H G +
Sbjct: 7 GSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS 43
Score = 46.4 bits (111), Expect = 8e-07
Identities = 14/42 (33%), Positives = 18/42 (42%), Gaps = 3/42 (7%)
Query: 1009 HMLSHTGEKPFCCHICGK--SLKGNLKDHILKCHTGERPYKC 1048
S +GEKP+ C+ CGK K L H + H G
Sbjct: 3 SGSSGSGEKPYECNECGKAFIWKSLLIVH-ERTHAGVSGPSS 43
Score = 42.5 bits (101), Expect = 2e-05
Identities = 13/35 (37%), Positives = 18/35 (51%)
Query: 1062 GVHMRKHNGEKPYNCDYCGQTFAARSTFTFHLKKH 1096
G +GEKPY C+ CG+ F +S H + H
Sbjct: 1 GSSGSSGSGEKPYECNECGKAFIWKSLLIVHERTH 35
Score = 40.6 bits (96), Expect = 1e-04
Identities = 13/42 (30%), Positives = 16/42 (38%), Gaps = 2/42 (4%)
Query: 1965 RHMLSHTGEKPFCCDICGK--SLKGNLKAHILRCQGERPYKC 2004
S +GEKP+ C+ CGK K L H G
Sbjct: 2 SSGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS 43
Score = 37.1 bits (87), Expect = 0.001
Identities = 11/35 (31%), Positives = 19/35 (54%), Gaps = 4/35 (11%)
Query: 1529 HINTHTGNKPYQCQICNKSFGTRRNYRLHLKRHKR 1563
++ +G KPY+C C K+F ++ L H+R
Sbjct: 3 SGSSGSGEKPYECNECGKAF----IWKSLLIVHER 33
Score = 36.0 bits (84), Expect = 0.004
Identities = 12/38 (31%), Positives = 16/38 (42%)
Query: 895 IKTIERKFECDYCKMKFKSKSFLSEHINTHTGNKPYQC 932
+ E+ +EC+ C F KS L H TH G
Sbjct: 6 SGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS 43
Score = 36.0 bits (84), Expect = 0.004
Identities = 10/31 (32%), Positives = 12/31 (38%)
Query: 1511 FECDFCKKKFYRNFDLQEHINTHTGNKPYQC 1541
+EC+ C K F L H TH G
Sbjct: 13 YECNECGKAFIWKSLLIVHERTHAGVSGPSS 43
Score = 35.6 bits (83), Expect = 0.006
Identities = 12/33 (36%), Positives = 14/33 (42%)
Query: 632 KKYECDSCNKKFWSKRALSEHMIIHTGIKEHQC 664
K YEC+ C K F K L H H G+
Sbjct: 11 KPYECNECGKAFIWKSLLIVHERTHAGVSGPSS 43
Score = 32.9 bits (76), Expect = 0.045
Identities = 9/23 (39%), Positives = 14/23 (60%)
Query: 920 HINTHTGNKPYQCQICKKSFANK 942
++ +G KPY+C C K+F K
Sbjct: 3 SGSSGSGEKPYECNECGKAFIWK 25
Score = 32.9 bits (76), Expect = 0.055
Identities = 9/33 (27%), Positives = 14/33 (42%)
Query: 652 HMIIHTGIKEHQCHVCNTAFYHIRSLSRHLKIH 684
+G K ++C+ C AF L H + H
Sbjct: 3 SGSSGSGEKPYECNECGKAFIWKSLLIVHERTH 35
Score = 30.6 bits (70), Expect = 0.30
Identities = 11/36 (30%), Positives = 14/36 (38%), Gaps = 1/36 (2%)
Query: 1352 TGNK-FECIYCKKKYRRKFDLKEHINKHTGNKPYHC 1386
+G K +EC C K + K L H H G
Sbjct: 8 SGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS 43
Score = 29.8 bits (68), Expect = 0.69
Identities = 10/35 (28%), Positives = 13/35 (37%), Gaps = 2/35 (5%)
Query: 989 GDKCHICKVCGA--KIKGNLQKHMLSHTGEKPFCC 1021
G+K + C CG K L H +H G
Sbjct: 9 GEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS 43
Score = 29.4 bits (67), Expect = 0.94
Identities = 12/34 (35%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 588 HLRHVHSSIKRYMCDICGKQFTTLSYLDLHRKSH 621
S K Y C+ CGK F S L +H ++H
Sbjct: 3 SGS-SGSGEKPYECNECGKAFIWKSLLIVHERTH 35
Score = 27.1 bits (61), Expect = 6.5
Identities = 9/35 (25%), Positives = 13/35 (37%), Gaps = 2/35 (5%)
Query: 1946 GDKCHVCKVCGA--KIKGNMKRHMLSHTGEKPFCC 1978
G+K + C CG K + H +H G
Sbjct: 9 GEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS 43
Score = 26.7 bits (60), Expect = 8.6
Identities = 10/34 (29%), Positives = 16/34 (47%), Gaps = 4/34 (11%)
Query: 1374 HINKHTGNKPYHCQICKESFYTLKTYRGDLKRHE 1407
+ +G KPY C C ++F ++ L HE
Sbjct: 3 SGSSGSGEKPYECNECGKAF----IWKSLLIVHE 32
Score = 26.7 bits (60), Expect = 9.6
Identities = 11/33 (33%), Positives = 13/33 (39%), Gaps = 3/33 (9%)
Query: 1560 RHKRSAGQLKPEDIHECKICHKIFLENSRLTRH 1592
S KP +EC C K F+ S L H
Sbjct: 2 SSGSSGSGEKP---YECNECGKAFIWKSLLIVH 31
>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 54.8 bits (133), Expect = 1e-09
Identities = 17/37 (45%), Positives = 20/37 (54%)
Query: 1040 HTGERPYKCDVCGSSFKDKWYLGVHMRKHNGEKPYNC 1076
TGE+PYKC+ CG F +L H H GEKP
Sbjct: 7 GTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43
Score = 46.7 bits (112), Expect = 6e-07
Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
Query: 1008 KHMLSHTGEKPFCCHICGK--SLKGNLKDHILKCHTGERPYKC 1048
S TGEKP+ C+ CGK + +L H HTGE+P
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQNSHLARH-RGIHTGEKPSGP 43
Score = 39.4 bits (93), Expect = 2e-04
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 6/43 (13%)
Query: 1966 HMLSHTGEKPFCCDICGKSLKGNLKAHILRCQ----GERPYKC 2004
S TGEKP+ C+ CGK +H+ R + GE+P
Sbjct: 3 SGSSGTGEKPYKCNECGKVF--TQNSHLARHRGIHTGEKPSGP 43
Score = 39.4 bits (93), Expect = 3e-04
Identities = 13/35 (37%), Positives = 15/35 (42%)
Query: 1062 GVHMRKHNGEKPYNCDYCGQTFAARSTFTFHLKKH 1096
G GEKPY C+ CG+ F S H H
Sbjct: 1 GSSGSSGTGEKPYKCNECGKVFTQNSHLARHRGIH 35
Score = 37.9 bits (89), Expect = 0.001
Identities = 13/35 (37%), Positives = 17/35 (48%), Gaps = 4/35 (11%)
Query: 1529 HINTHTGNKPYQCQICNKSFGTRRNYRLHLKRHKR 1563
++ TG KPY+C C K F HL RH+
Sbjct: 3 SGSSGTGEKPYKCNECGKVF----TQNSHLARHRG 33
Score = 37.5 bits (88), Expect = 0.001
Identities = 13/38 (34%), Positives = 18/38 (47%)
Query: 895 IKTIERKFECDYCKMKFKSKSFLSEHINTHTGNKPYQC 932
T E+ ++C+ C F S L+ H HTG KP
Sbjct: 6 SGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43
Score = 37.1 bits (87), Expect = 0.001
Identities = 12/31 (38%), Positives = 16/31 (51%)
Query: 1511 FECDFCKKKFYRNFDLQEHINTHTGNKPYQC 1541
++C+ C K F +N L H HTG KP
Sbjct: 13 YKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43
Score = 34.8 bits (81), Expect = 0.011
Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Query: 1998 GERPYKCDVCGSSFKDKKHFSVHIRNH-GE 2026
GE+PYKC+ CG F H + H H GE
Sbjct: 9 GEKPYKCNECGKVFTQNSHLARHRGIHTGE 38
Score = 34.0 bits (79), Expect = 0.020
Identities = 13/33 (39%), Positives = 16/33 (48%)
Query: 632 KKYECDSCNKKFWSKRALSEHMIIHTGIKEHQC 664
K Y+C+ C K F L+ H IHTG K
Sbjct: 11 KPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43
Score = 32.9 bits (76), Expect = 0.049
Identities = 12/43 (27%), Positives = 16/43 (37%), Gaps = 2/43 (4%)
Query: 652 HMIIHTGIKEHQCHVCNTAFYHIRSLSRHLKIHEYNESKMYKC 694
TG K ++C+ C F L+RH IH K
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIH--TGEKPSGP 43
Score = 32.5 bits (75), Expect = 0.066
Identities = 13/36 (36%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Query: 1352 TGNK-FECIYCKKKYRRKFDLKEHINKHTGNKPYHC 1386
TG K ++C C K + + L H HTG KP
Sbjct: 8 TGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43
Score = 31.7 bits (73), Expect = 0.17
Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 4/34 (11%)
Query: 920 HINTHTGNKPYQCQICKKSFANKRSYQRDLKRHK 953
++ TG KPY+C C K F + S+ L RH+
Sbjct: 3 SGSSGTGEKPYKCNECGKVF-TQNSH---LARHR 32
Score = 28.2 bits (64), Expect = 2.5
Identities = 15/51 (29%), Positives = 19/51 (37%), Gaps = 8/51 (15%)
Query: 588 HLRHVHSSIKRYMCDICGKQFTTLSYLDLHRKSHNETVKRKEEDKKYECDS 638
+ K Y C+ CGK FT S+L HR H +K S
Sbjct: 3 SGS-SGTGEKPYKCNECGKVFTQNSHLARHRGIHT-------GEKPSGPSS 45
Score = 27.9 bits (63), Expect = 3.1
Identities = 13/35 (37%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
Query: 989 GDKCHICKVCGA--KIKGNLQKHMLSHTGEKPFCC 1021
G+K + C CG +L +H HTGEKP
Sbjct: 9 GEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43
Score = 27.1 bits (61), Expect = 7.2
Identities = 12/38 (31%), Positives = 17/38 (44%), Gaps = 6/38 (15%)
Query: 381 AKHMRVHLRSVHNGKERKFICDICGKQFTSNIHASRHK 418
G E+ + C+ CGK FT N H +RH+
Sbjct: 1 GSSGSSG-----TG-EKPYKCNECGKVFTQNSHLARHR 32
>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 54.8 bits (133), Expect = 1e-09
Identities = 17/37 (45%), Positives = 20/37 (54%)
Query: 1040 HTGERPYKCDVCGSSFKDKWYLGVHMRKHNGEKPYNC 1076
TGE+PYKC+ CG F +L H H GEKP
Sbjct: 7 GTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGP 43
Score = 45.9 bits (110), Expect = 1e-06
Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
Query: 1009 HMLSHTGEKPFCCHICGK--SLKGNLKDHILKCHTGERPYKC 1048
S TGEKP+ C+ CGK + +L H HTGE+P
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLVRH-RGIHTGEKPSGP 43
Score = 41.3 bits (98), Expect = 5e-05
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 6/44 (13%)
Query: 1965 RHMLSHTGEKPFCCDICGKSLKGNLKAHILRCQ----GERPYKC 2004
S TGEKP+ C+ CGK +H++R + GE+P
Sbjct: 2 SSGSSGTGEKPYKCNECGKVF--TQNSHLVRHRGIHTGEKPSGP 43
Score = 39.8 bits (94), Expect = 2e-04
Identities = 13/35 (37%), Positives = 15/35 (42%)
Query: 1062 GVHMRKHNGEKPYNCDYCGQTFAARSTFTFHLKKH 1096
G GEKPY C+ CG+ F S H H
Sbjct: 1 GSSGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIH 35
Score = 38.2 bits (90), Expect = 6e-04
Identities = 13/35 (37%), Positives = 17/35 (48%), Gaps = 4/35 (11%)
Query: 1529 HINTHTGNKPYQCQICNKSFGTRRNYRLHLKRHKR 1563
++ TG KPY+C C K F HL RH+
Sbjct: 3 SGSSGTGEKPYKCNECGKVF----TQNSHLVRHRG 33
Score = 37.1 bits (87), Expect = 0.002
Identities = 13/38 (34%), Positives = 17/38 (44%)
Query: 895 IKTIERKFECDYCKMKFKSKSFLSEHINTHTGNKPYQC 932
T E+ ++C+ C F S L H HTG KP
Sbjct: 6 SGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGP 43
Score = 36.7 bits (86), Expect = 0.003
Identities = 12/31 (38%), Positives = 16/31 (51%)
Query: 1511 FECDFCKKKFYRNFDLQEHINTHTGNKPYQC 1541
++C+ C K F +N L H HTG KP
Sbjct: 13 YKCNECGKVFTQNSHLVRHRGIHTGEKPSGP 43
Score = 34.8 bits (81), Expect = 0.013
Identities = 14/30 (46%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Query: 1998 GERPYKCDVCGSSFKDKKHFSVHIRNH-GE 2026
GE+PYKC+ CG F H H H GE
Sbjct: 9 GEKPYKCNECGKVFTQNSHLVRHRGIHTGE 38
Score = 33.6 bits (78), Expect = 0.029
Identities = 13/33 (39%), Positives = 15/33 (45%)
Query: 632 KKYECDSCNKKFWSKRALSEHMIIHTGIKEHQC 664
K Y+C+ C K F L H IHTG K
Sbjct: 11 KPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGP 43
Score = 32.5 bits (75), Expect = 0.070
Identities = 13/36 (36%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Query: 1352 TGNK-FECIYCKKKYRRKFDLKEHINKHTGNKPYHC 1386
TG K ++C C K + + L H HTG KP
Sbjct: 8 TGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGP 43
Score = 32.5 bits (75), Expect = 0.078
Identities = 13/45 (28%), Positives = 16/45 (35%), Gaps = 6/45 (13%)
Query: 652 HMIIHTGIKEHQCHVCNTAFYHIRSLSRHLKIH--EYNESKMYKC 694
TG K ++C+ C F L RH IH E K
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGE----KPSGP 43
Score = 31.7 bits (73), Expect = 0.16
Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 4/34 (11%)
Query: 920 HINTHTGNKPYQCQICKKSFANKRSYQRDLKRHK 953
++ TG KPY+C C K F + S+ L RH+
Sbjct: 3 SGSSGTGEKPYKCNECGKVF-TQNSH---LVRHR 32
Score = 27.8 bits (63), Expect = 3.1
Identities = 13/34 (38%), Positives = 16/34 (47%), Gaps = 2/34 (5%)
Query: 590 RH--VHSSIKRYMCDICGKQFTTLSYLDLHRKSH 621
+ K Y C+ CGK FT S+L HR H
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIH 35
Score = 27.8 bits (63), Expect = 3.3
Identities = 13/35 (37%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
Query: 989 GDKCHICKVCGA--KIKGNLQKHMLSHTGEKPFCC 1021
G+K + C CG +L +H HTGEKP
Sbjct: 9 GEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGP 43
>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 54.8 bits (133), Expect = 1e-09
Identities = 17/37 (45%), Positives = 20/37 (54%)
Query: 1040 HTGERPYKCDVCGSSFKDKWYLGVHMRKHNGEKPYNC 1076
TGE+PYKC+ CG F +L H R H G KP
Sbjct: 7 GTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGP 43
Score = 46.7 bits (112), Expect = 6e-07
Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
Query: 1008 KHMLSHTGEKPFCCHICGK--SLKGNLKDHILKCHTGERPYKC 1048
S TGEKP+ C+ CGK + +L H + HTG +P
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQNSHLARH-RRVHTGGKPSGP 43
Score = 39.4 bits (93), Expect = 2e-04
Identities = 13/35 (37%), Positives = 16/35 (45%)
Query: 1062 GVHMRKHNGEKPYNCDYCGQTFAARSTFTFHLKKH 1096
G GEKPY C+ CG+ F S H + H
Sbjct: 1 GSSGSSGTGEKPYKCNECGKVFTQNSHLARHRRVH 35
Score = 39.4 bits (93), Expect = 3e-04
Identities = 14/43 (32%), Positives = 20/43 (46%), Gaps = 6/43 (13%)
Query: 1966 HMLSHTGEKPFCCDICGKSLKGNLKAHILRCQ----GERPYKC 2004
S TGEKP+ C+ CGK +H+ R + G +P
Sbjct: 3 SGSSGTGEKPYKCNECGKVF--TQNSHLARHRRVHTGGKPSGP 43
Score = 38.3 bits (90), Expect = 6e-04
Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 4/35 (11%)
Query: 1529 HINTHTGNKPYQCQICNKSFGTRRNYRLHLKRHKR 1563
++ TG KPY+C C K F HL RH+R
Sbjct: 3 SGSSGTGEKPYKCNECGKVF----TQNSHLARHRR 33
Score = 37.9 bits (89), Expect = 9e-04
Identities = 12/31 (38%), Positives = 16/31 (51%)
Query: 1511 FECDFCKKKFYRNFDLQEHINTHTGNKPYQC 1541
++C+ C K F +N L H HTG KP
Sbjct: 13 YKCNECGKVFTQNSHLARHRRVHTGGKPSGP 43
Score = 37.9 bits (89), Expect = 0.001
Identities = 13/38 (34%), Positives = 18/38 (47%)
Query: 895 IKTIERKFECDYCKMKFKSKSFLSEHINTHTGNKPYQC 932
T E+ ++C+ C F S L+ H HTG KP
Sbjct: 6 SGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGP 43
Score = 34.8 bits (81), Expect = 0.011
Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Query: 1998 GERPYKCDVCGSSFKDKKHFSVHIRNH-GE 2026
GE+PYKC+ CG F H + H R H G
Sbjct: 9 GEKPYKCNECGKVFTQNSHLARHRRVHTGG 38
Score = 34.0 bits (79), Expect = 0.020
Identities = 12/33 (36%), Positives = 16/33 (48%)
Query: 632 KKYECDSCNKKFWSKRALSEHMIIHTGIKEHQC 664
K Y+C+ C K F L+ H +HTG K
Sbjct: 11 KPYKCNECGKVFTQNSHLARHRRVHTGGKPSGP 43
Score = 32.9 bits (76), Expect = 0.061
Identities = 13/36 (36%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Query: 1352 TGNK-FECIYCKKKYRRKFDLKEHINKHTGNKPYHC 1386
TG K ++C C K + + L H HTG KP
Sbjct: 8 TGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGP 43
Score = 32.5 bits (75), Expect = 0.082
Identities = 11/43 (25%), Positives = 17/43 (39%), Gaps = 2/43 (4%)
Query: 652 HMIIHTGIKEHQCHVCNTAFYHIRSLSRHLKIHEYNESKMYKC 694
TG K ++C+ C F L+RH ++H K
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRRVH--TGGKPSGP 43
Score = 31.7 bits (73), Expect = 0.12
Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 4/34 (11%)
Query: 920 HINTHTGNKPYQCQICKKSFANKRSYQRDLKRHK 953
++ TG KPY+C C K F + S+ L RH+
Sbjct: 3 SGSSGTGEKPYKCNECGKVF-TQNSH---LARHR 32
Score = 28.3 bits (64), Expect = 2.4
Identities = 13/30 (43%), Positives = 17/30 (56%)
Query: 592 VHSSIKRYMCDICGKQFTTLSYLDLHRKSH 621
+ K Y C+ CGK FT S+L HR+ H
Sbjct: 6 SGTGEKPYKCNECGKVFTQNSHLARHRRVH 35
Score = 27.9 bits (63), Expect = 3.4
Identities = 12/35 (34%), Positives = 16/35 (45%), Gaps = 2/35 (5%)
Query: 989 GDKCHICKVCGAKI--KGNLQKHMLSHTGEKPFCC 1021
G+K + C CG +L +H HTG KP
Sbjct: 9 GEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGP 43
Score = 26.7 bits (60), Expect = 8.8
Identities = 12/38 (31%), Positives = 17/38 (44%), Gaps = 6/38 (15%)
Query: 381 AKHMRVHLRSVHNGKERKFICDICGKQFTSNIHASRHK 418
G E+ + C+ CGK FT N H +RH+
Sbjct: 1 GSSGSSG-----TG-EKPYKCNECGKVFTQNSHLARHR 32
>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 54.4 bits (132), Expect = 1e-09
Identities = 15/37 (40%), Positives = 20/37 (54%)
Query: 1040 HTGERPYKCDVCGSSFKDKWYLGVHMRKHNGEKPYNC 1076
+GE+PYKC CG +F +L H R H G +P
Sbjct: 7 GSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGP 43
Score = 47.5 bits (114), Expect = 3e-07
Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 3/43 (6%)
Query: 1008 KHMLSHTGEKPFCCHICGK--SLKGNLKDHILKCHTGERPYKC 1048
S +GEKP+ C CGK +L +H + HTG RP
Sbjct: 2 SSGSSGSGEKPYKCSECGKAFHRHTHLNEH-RRIHTGYRPSGP 43
Score = 41.3 bits (98), Expect = 5e-05
Identities = 13/44 (29%), Positives = 19/44 (43%), Gaps = 6/44 (13%)
Query: 1965 RHMLSHTGEKPFCCDICGKSLKGNLKAHILRCQ----GERPYKC 2004
S +GEKP+ C CGK+ + H+ + G RP
Sbjct: 2 SSGSSGSGEKPYKCSECGKAF--HRHTHLNEHRRIHTGYRPSGP 43
Score = 39.4 bits (93), Expect = 3e-04
Identities = 11/33 (33%), Positives = 15/33 (45%)
Query: 1064 HMRKHNGEKPYNCDYCGQTFAARSTFTFHLKKH 1096
+GEKPY C CG+ F + H + H
Sbjct: 3 SGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIH 35
Score = 39.4 bits (93), Expect = 3e-04
Identities = 12/35 (34%), Positives = 19/35 (54%), Gaps = 4/35 (11%)
Query: 1529 HINTHTGNKPYQCQICNKSFGTRRNYRLHLKRHKR 1563
++ +G KPY+C C K+F + HL H+R
Sbjct: 3 SGSSGSGEKPYKCSECGKAF----HRHTHLNEHRR 33
Score = 37.5 bits (88), Expect = 0.001
Identities = 11/38 (28%), Positives = 18/38 (47%)
Query: 895 IKTIERKFECDYCKMKFKSKSFLSEHINTHTGNKPYQC 932
+ E+ ++C C F + L+EH HTG +P
Sbjct: 6 SGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGP 43
Score = 37.5 bits (88), Expect = 0.001
Identities = 12/31 (38%), Positives = 17/31 (54%)
Query: 1511 FECDFCKKKFYRNFDLQEHINTHTGNKPYQC 1541
++C C K F+R+ L EH HTG +P
Sbjct: 13 YKCSECGKAFHRHTHLNEHRRIHTGYRPSGP 43
Score = 35.2 bits (82), Expect = 0.009
Identities = 10/43 (23%), Positives = 17/43 (39%), Gaps = 2/43 (4%)
Query: 652 HMIIHTGIKEHQCHVCNTAFYHIRSLSRHLKIHEYNESKMYKC 694
+G K ++C C AF+ L+ H +IH +
Sbjct: 3 SGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIH--TGYRPSGP 43
Score = 34.4 bits (80), Expect = 0.017
Identities = 13/33 (39%), Positives = 16/33 (48%)
Query: 632 KKYECDSCNKKFWSKRALSEHMIIHTGIKEHQC 664
K Y+C C K F L+EH IHTG +
Sbjct: 11 KPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGP 43
Score = 34.4 bits (80), Expect = 0.018
Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Query: 1998 GERPYKCDVCGSSFKDKKHFSVHIRNH-GE 2026
GE+PYKC CG +F H + H R H G
Sbjct: 9 GEKPYKCSECGKAFHRHTHLNEHRRIHTGY 38
Score = 33.6 bits (78), Expect = 0.034
Identities = 13/36 (36%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Query: 1352 TGNK-FECIYCKKKYRRKFDLKEHINKHTGNKPYHC 1386
+G K ++C C K + R L EH HTG +P
Sbjct: 8 SGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGP 43
Score = 32.9 bits (76), Expect = 0.056
Identities = 10/34 (29%), Positives = 20/34 (58%), Gaps = 4/34 (11%)
Query: 920 HINTHTGNKPYQCQICKKSFANKRSYQRDLKRHK 953
++ +G KPY+C C K+F ++ ++ L H+
Sbjct: 3 SGSSGSGEKPYKCSECGKAF-HRHTH---LNEHR 32
Score = 28.2 bits (64), Expect = 2.7
Identities = 11/35 (31%), Positives = 16/35 (45%), Gaps = 2/35 (5%)
Query: 989 GDKCHICKVCGA--KIKGNLQKHMLSHTGEKPFCC 1021
G+K + C CG +L +H HTG +P
Sbjct: 9 GEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGP 43
Score = 27.8 bits (63), Expect = 3.5
Identities = 13/51 (25%), Positives = 18/51 (35%), Gaps = 8/51 (15%)
Query: 588 HLRHVHSSIKRYMCDICGKQFTTLSYLDLHRKSHNETVKRKEEDKKYECDS 638
S K Y C CGK F ++L+ HR+ H + S
Sbjct: 3 SGS-SGSGEKPYKCSECGKAFHRHTHLNEHRRIHT-------GYRPSGPSS 45
>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 54.4 bits (132), Expect = 1e-09
Identities = 16/37 (43%), Positives = 20/37 (54%)
Query: 1040 HTGERPYKCDVCGSSFKDKWYLGVHMRKHNGEKPYNC 1076
TG++PYKC+ CG F +L H H GEKP
Sbjct: 7 GTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43
Score = 45.2 bits (108), Expect = 3e-06
Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
Query: 1009 HMLSHTGEKPFCCHICGK--SLKGNLKDHILKCHTGERPYKC 1048
S TG+KP+ C+ CGK + +L H HTGE+P
Sbjct: 3 SGSSGTGKKPYKCNECGKVFTQNSHLARH-RGIHTGEKPSGP 43
Score = 41.7 bits (99), Expect = 5e-05
Identities = 12/35 (34%), Positives = 15/35 (42%)
Query: 1062 GVHMRKHNGEKPYNCDYCGQTFAARSTFTFHLKKH 1096
G G+KPY C+ CG+ F S H H
Sbjct: 1 GSSGSSGTGKKPYKCNECGKVFTQNSHLARHRGIH 35
Score = 39.4 bits (93), Expect = 2e-04
Identities = 14/43 (32%), Positives = 21/43 (48%), Gaps = 6/43 (13%)
Query: 1966 HMLSHTGEKPFCCDICGKSLKGNLKAHILRCQ----GERPYKC 2004
S TG+KP+ C+ CGK +H+ R + GE+P
Sbjct: 3 SGSSGTGKKPYKCNECGKVF--TQNSHLARHRGIHTGEKPSGP 43
Score = 38.3 bits (90), Expect = 7e-04
Identities = 13/35 (37%), Positives = 17/35 (48%), Gaps = 4/35 (11%)
Query: 1529 HINTHTGNKPYQCQICNKSFGTRRNYRLHLKRHKR 1563
++ TG KPY+C C K F HL RH+
Sbjct: 3 SGSSGTGKKPYKCNECGKVF----TQNSHLARHRG 33
Score = 37.5 bits (88), Expect = 0.001
Identities = 12/38 (31%), Positives = 18/38 (47%)
Query: 895 IKTIERKFECDYCKMKFKSKSFLSEHINTHTGNKPYQC 932
T ++ ++C+ C F S L+ H HTG KP
Sbjct: 6 SGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43
Score = 37.1 bits (87), Expect = 0.002
Identities = 12/31 (38%), Positives = 16/31 (51%)
Query: 1511 FECDFCKKKFYRNFDLQEHINTHTGNKPYQC 1541
++C+ C K F +N L H HTG KP
Sbjct: 13 YKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43
Score = 34.4 bits (80), Expect = 0.016
Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Query: 1998 GERPYKCDVCGSSFKDKKHFSVHIRNH-GE 2026
G++PYKC+ CG F H + H H GE
Sbjct: 9 GKKPYKCNECGKVFTQNSHLARHRGIHTGE 38
Score = 34.4 bits (80), Expect = 0.016
Identities = 13/33 (39%), Positives = 16/33 (48%)
Query: 632 KKYECDSCNKKFWSKRALSEHMIIHTGIKEHQC 664
K Y+C+ C K F L+ H IHTG K
Sbjct: 11 KPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43
Score = 33.6 bits (78), Expect = 0.030
Identities = 12/43 (27%), Positives = 16/43 (37%), Gaps = 2/43 (4%)
Query: 652 HMIIHTGIKEHQCHVCNTAFYHIRSLSRHLKIHEYNESKMYKC 694
TG K ++C+ C F L+RH IH K
Sbjct: 3 SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIH--TGEKPSGP 43
Score = 32.5 bits (75), Expect = 0.068
Identities = 13/36 (36%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Query: 1352 TGNK-FECIYCKKKYRRKFDLKEHINKHTGNKPYHC 1386
TG K ++C C K + + L H HTG KP
Sbjct: 8 TGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43
Score = 31.7 bits (73), Expect = 0.13
Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 4/34 (11%)
Query: 920 HINTHTGNKPYQCQICKKSFANKRSYQRDLKRHK 953
++ TG KPY+C C K F + S+ L RH+
Sbjct: 3 SGSSGTGKKPYKCNECGKVF-TQNSH---LARHR 32
Score = 27.9 bits (63), Expect = 2.9
Identities = 15/51 (29%), Positives = 19/51 (37%), Gaps = 8/51 (15%)
Query: 588 HLRHVHSSIKRYMCDICGKQFTTLSYLDLHRKSHNETVKRKEEDKKYECDS 638
+ K Y C+ CGK FT S+L HR H +K S
Sbjct: 3 SGS-SGTGKKPYKCNECGKVFTQNSHLARHRGIHT-------GEKPSGPSS 45
Score = 27.9 bits (63), Expect = 3.2
Identities = 13/35 (37%), Positives = 16/35 (45%), Gaps = 2/35 (5%)
Query: 989 GDKCHICKVCGAKI--KGNLQKHMLSHTGEKPFCC 1021
G K + C CG +L +H HTGEKP
Sbjct: 9 GKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43
>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens}
Length = 46
Score = 54.1 bits (131), Expect = 2e-09
Identities = 14/40 (35%), Positives = 19/40 (47%)
Query: 1038 KCHTGERPYKCDVCGSSFKDKWYLGVHMRKHNGEKPYNCD 1077
+GE+ + CD CG +F L +H R H GEK
Sbjct: 5 SSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPS 44
Score = 42.6 bits (101), Expect = 2e-05
Identities = 12/35 (34%), Positives = 16/35 (45%)
Query: 1062 GVHMRKHNGEKPYNCDYCGQTFAARSTFTFHLKKH 1096
G +GEK + CD CG+ F S H + H
Sbjct: 1 GSSGSSGSGEKSHTCDECGKNFCYISALRIHQRVH 35
Score = 37.2 bits (87), Expect = 0.002
Identities = 10/35 (28%), Positives = 17/35 (48%), Gaps = 4/35 (11%)
Query: 1529 HINTHTGNKPYQCQICNKSFGTRRNYRLHLKRHKR 1563
++ +G K + C C K+F Y L+ H+R
Sbjct: 3 SGSSGSGEKSHTCDECGKNF----CYISALRIHQR 33
Score = 35.6 bits (83), Expect = 0.006
Identities = 12/30 (40%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Query: 1998 GERPYKCDVCGSSFKDKKHFSVHIRNH-GE 2026
GE+ + CD CG +F +H R H GE
Sbjct: 9 GEKSHTCDECGKNFCYISALRIHQRVHMGE 38
Score = 35.6 bits (83), Expect = 0.006
Identities = 13/42 (30%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Query: 1966 HMLSHTGEKPFCCDICGKSL--KGNLKAHILRCQGERPYKCD 2005
S +GEK CD CGK+ L+ H GE+
Sbjct: 3 SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPS 44
Score = 33.3 bits (77), Expect = 0.037
Identities = 10/33 (30%), Positives = 15/33 (45%)
Query: 652 HMIIHTGIKEHQCHVCNTAFYHIRSLSRHLKIH 684
+G K H C C F +I +L H ++H
Sbjct: 3 SGSSGSGEKSHTCDECGKNFCYISALRIHQRVH 35
Score = 32.9 bits (76), Expect = 0.053
Identities = 11/38 (28%), Positives = 13/38 (34%)
Query: 895 IKTIERKFECDYCKMKFKSKSFLSEHINTHTGNKPYQC 932
+ E+ CD C F S L H H G K
Sbjct: 6 SGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGP 43
Score = 32.9 bits (76), Expect = 0.059
Identities = 9/34 (26%), Positives = 16/34 (47%), Gaps = 4/34 (11%)
Query: 920 HINTHTGNKPYQCQICKKSFANKRSYQRDLKRHK 953
++ +G K + C C K+F Y L+ H+
Sbjct: 3 SGSSGSGEKSHTCDECGKNF----CYISALRIHQ 32
Score = 32.6 bits (75), Expect = 0.072
Identities = 12/33 (36%), Positives = 14/33 (42%)
Query: 632 KKYECDSCNKKFWSKRALSEHMIIHTGIKEHQC 664
K + CD C K F AL H +H G K
Sbjct: 11 KSHTCDECGKNFCYISALRIHQRVHMGEKCSGP 43
Score = 31.4 bits (72), Expect = 0.17
Identities = 12/30 (40%), Positives = 17/30 (56%)
Query: 592 VHSSIKRYMCDICGKQFTTLSYLDLHRKSH 621
S K + CD CGK F +S L +H++ H
Sbjct: 6 SGSGEKSHTCDECGKNFCYISALRIHQRVH 35
Score = 31.0 bits (71), Expect = 0.29
Identities = 10/31 (32%), Positives = 11/31 (35%)
Query: 1511 FECDFCKKKFYRNFDLQEHINTHTGNKPYQC 1541
CD C K F L+ H H G K
Sbjct: 13 HTCDECGKNFCYISALRIHQRVHMGEKCSGP 43
Score = 29.9 bits (68), Expect = 0.57
Identities = 12/35 (34%), Positives = 14/35 (40%), Gaps = 2/35 (5%)
Query: 989 GDKCHICKVCGA--KIKGNLQKHMLSHTGEKPFCC 1021
G+K H C CG L+ H H GEK
Sbjct: 9 GEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGP 43
Score = 28.3 bits (64), Expect = 2.5
Identities = 10/36 (27%), Positives = 13/36 (36%), Gaps = 1/36 (2%)
Query: 1352 TGNK-FECIYCKKKYRRKFDLKEHINKHTGNKPYHC 1386
+G K C C K + L+ H H G K
Sbjct: 8 SGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGP 43
Score = 27.9 bits (63), Expect = 3.0
Identities = 11/36 (30%), Positives = 14/36 (38%), Gaps = 2/36 (5%)
Query: 1946 GDKCHVCKVCGA--KIKGNMKRHMLSHTGEKPFCCD 1979
G+K H C CG ++ H H GEK
Sbjct: 9 GEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPS 44
Score = 27.9 bits (63), Expect = 3.6
Identities = 9/29 (31%), Positives = 14/29 (48%)
Query: 859 REVHSSQKKYVCDMCGKQFTSNNRVSQHK 887
S +K + CD CGK F + + H+
Sbjct: 4 GSSGSGEKSHTCDECGKNFCYISALRIHQ 32
Score = 27.2 bits (61), Expect = 5.5
Identities = 8/33 (24%), Positives = 14/33 (42%), Gaps = 4/33 (12%)
Query: 1374 HINKHTGNKPYHCQICKESFYTLKTYRGDLKRH 1406
+ +G K + C C ++F Y L+ H
Sbjct: 3 SGSSGSGEKSHTCDECGKNF----CYISALRIH 31
>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural
genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 47
Score = 53.7 bits (130), Expect = 2e-09
Identities = 16/40 (40%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Query: 1038 KCHTGERPYKCDVCGSSFKDKWYLGVHMRK-HNGEKPYNC 1076
TG++PY+C CG +F L H R H GEKP
Sbjct: 5 SSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGP 44
Score = 49.5 bits (119), Expect = 8e-08
Identities = 16/42 (38%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Query: 1009 HMLSHTGEKPFCCHICGK--SLKGNLKDHILKCHTGERPYKC 1048
S TG+KP+ C CGK +L H HTGE+P
Sbjct: 3 SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGP 44
Score = 39.5 bits (93), Expect = 2e-04
Identities = 10/31 (32%), Positives = 14/31 (45%)
Query: 1062 GVHMRKHNGEKPYNCDYCGQTFAARSTFTFH 1092
G G+KPY C CG+ F ++ H
Sbjct: 1 GSSGSSGTGKKPYECIECGKAFIQNTSLIRH 31
Score = 38.7 bits (91), Expect = 4e-04
Identities = 13/44 (29%), Positives = 19/44 (43%), Gaps = 7/44 (15%)
Query: 1966 HMLSHTGEKPFCCDICGKSLKGNLKAHILRCQ-----GERPYKC 2004
S TG+KP+ C CGK+ ++R GE+P
Sbjct: 3 SGSSGTGKKPYECIECGKAF--IQNTSLIRHWRYYHTGEKPSGP 44
Score = 37.5 bits (88), Expect = 0.001
Identities = 13/36 (36%), Positives = 17/36 (47%), Gaps = 4/36 (11%)
Query: 1529 HINTHTGNKPYQCQICNKSFGTRRNYRLHLKRHKRS 1564
++ TG KPY+C C K+F L RH R
Sbjct: 3 SGSSGTGKKPYECIECGKAF----IQNTSLIRHWRY 34
Score = 34.8 bits (81), Expect = 0.012
Identities = 12/39 (30%), Positives = 16/39 (41%), Gaps = 1/39 (2%)
Query: 895 IKTIERKFECDYCKMKFKSKSFLSEHI-NTHTGNKPYQC 932
T ++ +EC C F + L H HTG KP
Sbjct: 6 SGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGP 44
Score = 34.5 bits (80), Expect = 0.015
Identities = 13/32 (40%), Positives = 15/32 (46%), Gaps = 1/32 (3%)
Query: 1511 FECDFCKKKFYRNFDLQEHI-NTHTGNKPYQC 1541
+EC C K F +N L H HTG KP
Sbjct: 13 YECIECGKAFIQNTSLIRHWRYYHTGEKPSGP 44
Score = 32.5 bits (75), Expect = 0.077
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 920 HINTHTGNKPYQCQICKKSFANK 942
++ TG KPY+C C K+F
Sbjct: 3 SGSSGTGKKPYECIECGKAFIQN 25
Score = 32.5 bits (75), Expect = 0.086
Identities = 9/26 (34%), Positives = 13/26 (50%)
Query: 1998 GERPYKCDVCGSSFKDKKHFSVHIRN 2023
G++PY+C CG +F H R
Sbjct: 9 GKKPYECIECGKAFIQNTSLIRHWRY 34
Score = 31.8 bits (73), Expect = 0.15
Identities = 13/34 (38%), Positives = 14/34 (41%), Gaps = 1/34 (2%)
Query: 632 KKYECDSCNKKFWSKRALSEHM-IIHTGIKEHQC 664
K YEC C K F +L H HTG K
Sbjct: 11 KPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGP 44
Score = 31.4 bits (72), Expect = 0.17
Identities = 15/37 (40%), Positives = 18/37 (48%), Gaps = 2/37 (5%)
Query: 1352 TGNK-FECIYCKKKYRRKFDLKEHINK-HTGNKPYHC 1386
TG K +ECI C K + + L H HTG KP
Sbjct: 8 TGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGP 44
Score = 31.0 bits (71), Expect = 0.27
Identities = 13/45 (28%), Positives = 15/45 (33%), Gaps = 4/45 (8%)
Query: 1315 HLRQVHTSQKRYLCDICGKQFTSTNRVNIHKACVHSSTGNK-FEC 1358
T +K Y C CGK F + H H TG K
Sbjct: 3 SGS-SGTGKKPYECIECGKAFIQNTSLIRHWRYYH--TGEKPSGP 44
Score = 30.2 bits (69), Expect = 0.51
Identities = 13/48 (27%), Positives = 18/48 (37%), Gaps = 6/48 (12%)
Query: 857 HLREVHSSQKKYVCDMCGKQFTSNNRVSQHKAYSHFGIIKTIERKFEC 904
+ +K Y C CGK F N + +H Y H G E+
Sbjct: 3 SGS-SGTGKKPYECIECGKAFIQNTSLIRHWRYYHTG-----EKPSGP 44
Score = 29.1 bits (66), Expect = 1.4
Identities = 14/47 (29%), Positives = 16/47 (34%), Gaps = 7/47 (14%)
Query: 652 HMIIHTGIKEHQCHVCNTAFYHIRSLSRHL-KIH--EYNESKMYKCP 695
TG K ++C C AF SL RH H E K
Sbjct: 3 SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGE----KPSGPS 45
Score = 26.8 bits (60), Expect = 8.8
Identities = 11/29 (37%), Positives = 13/29 (44%), Gaps = 4/29 (13%)
Query: 1378 HTGNKPYHCQICKESFYTLKTYRGDLKRH 1406
TG KPY C C ++F L RH
Sbjct: 7 GTGKKPYECIECGKAF----IQNTSLIRH 31
>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens}
Length = 41
Score = 53.3 bits (129), Expect = 2e-09
Identities = 15/36 (41%), Positives = 21/36 (58%)
Query: 1040 HTGERPYKCDVCGSSFKDKWYLGVHMRKHNGEKPYN 1075
+G+R Y+C CG SF+ K L +H R H G P +
Sbjct: 5 SSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPSS 40
Score = 41.8 bits (99), Expect = 3e-05
Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 3/37 (8%)
Query: 1012 SHTGEKPFCCHICGK--SLKGNLKDHILKCHTGERPY 1046
+G++ + C CGK KG+L H + HTG P
Sbjct: 4 GSSGQRVYECQECGKSFRQKGSLTLH-ERIHTGSGPS 39
Score = 37.2 bits (87), Expect = 0.001
Identities = 9/31 (29%), Positives = 17/31 (54%)
Query: 1066 RKHNGEKPYNCDYCGQTFAARSTFTFHLKKH 1096
+G++ Y C CG++F + + T H + H
Sbjct: 3 SGSSGQRVYECQECGKSFRQKGSLTLHERIH 33
Score = 36.8 bits (86), Expect = 0.002
Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Query: 1998 GERPYKCDVCGSSFKDKKHFSVHIRNH-GE 2026
G+R Y+C CG SF+ K ++H R H G
Sbjct: 7 GQRVYECQECGKSFRQKGSLTLHERIHTGS 36
Score = 35.6 bits (83), Expect = 0.004
Identities = 11/33 (33%), Positives = 17/33 (51%), Gaps = 4/33 (12%)
Query: 1531 NTHTGNKPYQCQICNKSFGTRRNYRLHLKRHKR 1563
+ +G + Y+CQ C KSF + L H+R
Sbjct: 3 SGSSGQRVYECQECGKSF----RQKGSLTLHER 31
Score = 35.2 bits (82), Expect = 0.007
Identities = 12/34 (35%), Positives = 18/34 (52%)
Query: 897 TIERKFECDYCKMKFKSKSFLSEHINTHTGNKPY 930
+ +R +EC C F+ K L+ H HTG+ P
Sbjct: 6 SGQRVYECQECGKSFRQKGSLTLHERIHTGSGPS 39
Score = 34.5 bits (80), Expect = 0.012
Identities = 11/40 (27%), Positives = 17/40 (42%), Gaps = 10/40 (25%)
Query: 1969 SHTGEKPFCCDICGK--SLKGNLKAHILRCQ----GERPY 2002
+G++ + C CGK KG+L H + G P
Sbjct: 4 GSSGQRVYECQECGKSFRQKGSLTLH----ERIHTGSGPS 39
Score = 34.5 bits (80), Expect = 0.015
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Query: 1350 SSTGNK-FECIYCKKKYRRKFDLKEHINKHTGNKPY 1384
S+G + +EC C K +R+K L H HTG+ P
Sbjct: 4 GSSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPS 39
Score = 33.7 bits (78), Expect = 0.025
Identities = 13/29 (44%), Positives = 16/29 (55%)
Query: 632 KKYECDSCNKKFWSKRALSEHMIIHTGIK 660
+ YEC C K F K +L+ H IHTG
Sbjct: 9 RVYECQECGKSFRQKGSLTLHERIHTGSG 37
Score = 33.3 bits (77), Expect = 0.032
Identities = 11/29 (37%), Positives = 14/29 (48%)
Query: 1511 FECDFCKKKFYRNFDLQEHINTHTGNKPY 1539
+EC C K F + L H HTG+ P
Sbjct: 11 YECQECGKSFRQKGSLTLHERIHTGSGPS 39
Score = 31.4 bits (72), Expect = 0.19
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 922 NTHTGNKPYQCQICKKSFANK 942
+ +G + Y+CQ C KSF K
Sbjct: 3 SGSSGQRVYECQECGKSFRQK 23
Score = 29.1 bits (66), Expect = 1.3
Identities = 9/29 (31%), Positives = 16/29 (55%)
Query: 656 HTGIKEHQCHVCNTAFYHIRSLSRHLKIH 684
+G + ++C C +F SL+ H +IH
Sbjct: 5 SSGQRVYECQECGKSFRQKGSLTLHERIH 33
Score = 28.3 bits (64), Expect = 2.3
Identities = 12/33 (36%), Positives = 17/33 (51%), Gaps = 2/33 (6%)
Query: 989 GDKCHICKVCGA--KIKGNLQKHMLSHTGEKPF 1019
G + + C+ CG + KG+L H HTG P
Sbjct: 7 GQRVYECQECGKSFRQKGSLTLHERIHTGSGPS 39
Score = 27.2 bits (61), Expect = 5.7
Identities = 11/30 (36%), Positives = 15/30 (50%), Gaps = 4/30 (13%)
Query: 1378 HTGNKPYHCQICKESFYTLKTYRGDLKRHE 1407
+G + Y CQ C +SF +G L HE
Sbjct: 5 SSGQRVYECQECGKSF----RQKGSLTLHE 30
Score = 26.4 bits (59), Expect = 8.8
Identities = 10/25 (40%), Positives = 12/25 (48%)
Query: 597 KRYMCDICGKQFTTLSYLDLHRKSH 621
+ Y C CGK F L LH + H
Sbjct: 9 RVYECQECGKSFRQKGSLTLHERIH 33
Score = 26.4 bits (59), Expect = 10.0
Identities = 11/33 (33%), Positives = 17/33 (51%), Gaps = 2/33 (6%)
Query: 1946 GDKCHVCKVCGA--KIKGNMKRHMLSHTGEKPF 1976
G + + C+ CG + KG++ H HTG P
Sbjct: 7 GQRVYECQECGKSFRQKGSLTLHERIHTGSGPS 39
>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible
early growth response protein 1, TGFB-inducible early
growth response protein 1; NMR {Homo sapiens}
Length = 72
Score = 52.8 bits (127), Expect = 1e-08
Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 4/61 (6%)
Query: 1040 HTGERPYKCDV--CGSSFKDKWYLGVHMRKHNGEKPYNCDY--CGQTFAARSTFTFHLKK 1095
+ R + C CG ++ +L H R H GEKP++C + C + FA + H +
Sbjct: 12 SSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRT 71
Query: 1096 H 1096
H
Sbjct: 72 H 72
Score = 49.7 bits (119), Expect = 1e-07
Identities = 19/69 (27%), Positives = 27/69 (39%), Gaps = 7/69 (10%)
Query: 1006 LQKHMLSHTGEKPFCCHI--CGKSLK--GNLKDHILKCHTGERPYKCDV--CGSSFKDKW 1059
+ + + C CGK+ +LK H + HTGE+P+ C C F
Sbjct: 5 SSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAH-TRTHTGEKPFSCSWKGCERRFARSD 63
Query: 1060 YLGVHMRKH 1068
L H R H
Sbjct: 64 ELSRHRRTH 72
Score = 45.5 bits (108), Expect = 4e-06
Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 8/63 (12%)
Query: 1506 TIQRKFECDF--CKKKFYRNFDLQEHINTHTGNKPYQCQI--CNKSFGTRRNYRLHLKRH 1561
+ R C C K ++++ L+ H THTG KP+ C C + F R + L RH
Sbjct: 13 SRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRF-ARSD---ELSRH 68
Query: 1562 KRS 1564
+R+
Sbjct: 69 RRT 71
Score = 43.5 bits (103), Expect = 2e-05
Identities = 18/67 (26%), Positives = 25/67 (37%), Gaps = 6/67 (8%)
Query: 1964 KRHMLSHTGEKPFCCDI--CGKSLK--GNLKAHILRCQGERPYKCDV--CGSSFKDKKHF 2017
+ + + C CGK+ +LKAH GE+P+ C C F
Sbjct: 6 SGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDEL 65
Query: 2018 SVHIRNH 2024
S H R H
Sbjct: 66 SRHRRTH 72
Score = 41.2 bits (97), Expect = 1e-04
Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 8/61 (13%)
Query: 897 TIERKFECDY--CKMKFKSKSFLSEHINTHTGNKPYQCQI--CKKSFANKRSYQRDLKRH 952
+ R C + C + S L H THTG KP+ C C++ FA RS +L RH
Sbjct: 13 SRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFA--RSD--ELSRH 68
Query: 953 K 953
+
Sbjct: 69 R 69
Score = 38.1 bits (89), Expect = 0.001
Identities = 16/72 (22%), Positives = 25/72 (34%), Gaps = 11/72 (15%)
Query: 1526 LQEHINTHTGNKPYQCQI--CNKSFGTRRNYRLHLKRHKRSAGQLKPEDIHECKI--CHK 1581
+ + + C C K++ HLK H R+ KP C C +
Sbjct: 5 SSGPQIDSSRIRSHICSHPGCGKTYFKSS----HLKAHTRTHTGEKP---FSCSWKGCER 57
Query: 1582 IFLENSRLTRHM 1593
F + L+RH
Sbjct: 58 RFARSDELSRHR 69
Score = 37.4 bits (87), Expect = 0.003
Identities = 18/72 (25%), Positives = 23/72 (31%), Gaps = 7/72 (9%)
Query: 617 HRKSHNETVKRKEEDKKYECD--SCNKKFWSKRALSEHMIIHTGIKEHQCHV--CNTAFY 672
R + + C C K ++ L H HTG K C C F
Sbjct: 4 GSSGPQIDSSRI---RSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFA 60
Query: 673 HIRSLSRHLKIH 684
LSRH + H
Sbjct: 61 RSDELSRHRRTH 72
Score = 36.2 bits (84), Expect = 0.007
Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 4/49 (8%)
Query: 372 PLCTKIFTTAKHMRVHLRSVHNGKERKFICDI--CGKQFTSNIHASRHK 418
P C K + + H++ H R H G E+ F C C ++F + SRH+
Sbjct: 23 PGCGKTYFKSSHLKAHTR-THTG-EKPFSCSWKGCERRFARSDELSRHR 69
Score = 36.2 bits (84), Expect = 0.008
Identities = 18/56 (32%), Positives = 23/56 (41%), Gaps = 8/56 (14%)
Query: 1355 KFECIY--CKKKYRRKFDLKEHINKHTGNKPYHCQI--CKESFYTLKTYRGDLKRH 1406
C + C K Y + LK H HTG KP+ C C+ F +L RH
Sbjct: 17 SHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRF----ARSDELSRH 68
Score = 35.8 bits (83), Expect = 0.009
Identities = 18/76 (23%), Positives = 33/76 (43%), Gaps = 10/76 (13%)
Query: 1462 RQMRIHLREAHSQKKYACDV--CGKQFTSTNRVSQHKAHSHFGIIKTIQRKFECDF--CK 1517
++ + + C CGK + + S KAH+ T ++ F C + C+
Sbjct: 3 SGSSGPQIDSSRIRSHICSHPGCGKTYF---KSSHLKAHTR---THTGEKPFSCSWKGCE 56
Query: 1518 KKFYRNFDLQEHINTH 1533
++F R+ +L H TH
Sbjct: 57 RRFARSDELSRHRRTH 72
Score = 35.8 bits (83), Expect = 0.011
Identities = 17/70 (24%), Positives = 25/70 (35%), Gaps = 6/70 (8%)
Query: 646 KRALSEHMIIHTGIKEHQCHV--CNTAFYHIRSLSRHLKIHEYNESKMYKC--PVCSKMF 701
S I + I+ H C C ++ L H + H K + C C + F
Sbjct: 2 SSGSSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTH--TGEKPFSCSWKGCERRF 59
Query: 702 TELYEMKRHR 711
E+ RHR
Sbjct: 60 ARSDELSRHR 69
Score = 33.5 bits (77), Expect = 0.057
Identities = 18/68 (26%), Positives = 29/68 (42%), Gaps = 11/68 (16%)
Query: 593 HSSIKRYMCDI--CGKQFTTLSYLDLHRKSHNETVKRKEEDKKYECD--SCNKKFWSKRA 648
S I+ ++C CGK + S+L H ++H +K + C C ++F
Sbjct: 12 SSRIRSHICSHPGCGKTYFKSSHLKAHTRTHT-------GEKPFSCSWKGCERRFARSDE 64
Query: 649 LSEHMIIH 656
LS H H
Sbjct: 65 LSRHRRTH 72
Score = 33.5 bits (77), Expect = 0.074
Identities = 15/45 (33%), Positives = 21/45 (46%), Gaps = 6/45 (13%)
Query: 1946 GDKCHVCKV--CGAKIK--GNMKRHMLSHTGEKPFCCDI--CGKS 1984
+ H+C CG ++K H +HTGEKPF C C +
Sbjct: 14 RIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERR 58
Score = 32.4 bits (74), Expect = 0.18
Identities = 13/39 (33%), Positives = 19/39 (48%), Gaps = 3/39 (7%)
Query: 1300 PVCHKTYSTPKTMRRHLRQVHTSQKRYLCDI--CGKQFT 1336
P C KTY ++ H R HT +K + C C ++F
Sbjct: 23 PGCGKTYFKSSHLKAHTR-THTGEKPFSCSWKGCERRFA 60
Score = 32.4 bits (74), Expect = 0.18
Identities = 7/38 (18%), Positives = 14/38 (36%), Gaps = 2/38 (5%)
Query: 1061 LGVHMRKHNGEKPYNCDY--CGQTFAARSTFTFHLKKH 1096
+ + + C + CG+T+ S H + H
Sbjct: 5 SSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTH 42
Score = 32.0 bits (73), Expect = 0.23
Identities = 15/58 (25%), Positives = 25/58 (43%), Gaps = 5/58 (8%)
Query: 568 KSKQCPI--CEKIFAAPKQMRMHLRHVHSSIKRYMCDI--CGKQFTTLSYLDLHRKSH 621
+S C C K + ++ H R H+ K + C C ++F L HR++H
Sbjct: 16 RSHICSHPGCGKTYFKSSHLKAHTR-THTGEKPFSCSWKGCERRFARSDELSRHRRTH 72
Score = 31.6 bits (72), Expect = 0.27
Identities = 14/48 (29%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Query: 842 PVCHKTYSTPKSMRKHLREVHSSQKKYVCDM--CGKQFTSNNRVSQHK 887
P C KTY ++ H R H+ +K + C C ++F ++ +S+H+
Sbjct: 23 PGCGKTYFKSSHLKAHTR-THTGEKPFSCSWKGCERRFARSDELSRHR 69
Score = 31.6 bits (72), Expect = 0.31
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 6/45 (13%)
Query: 989 GDKCHICKV--CGAKIK--GNLQKHMLSHTGEKPFCCHI--CGKS 1027
+ HIC CG +L+ H +HTGEKPF C C +
Sbjct: 14 RIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERR 58
Score = 31.2 bits (71), Expect = 0.41
Identities = 15/64 (23%), Positives = 30/64 (46%), Gaps = 8/64 (12%)
Query: 1320 HTSQKRYLCDI--CGKQFTSTNRVNIHKACVHSSTGNK-FECIY--CKKKYRRKFDLKEH 1374
+ + ++C CGK + ++ + H + TG K F C + C++++ R +L H
Sbjct: 12 SSRIRSHICSHPGCGKTYFKSSHLKAH---TRTHTGEKPFSCSWKGCERRFARSDELSRH 68
Query: 1375 INKH 1378
H
Sbjct: 69 RRTH 72
Score = 30.8 bits (70), Expect = 0.56
Identities = 17/71 (23%), Positives = 27/71 (38%), Gaps = 11/71 (15%)
Query: 1875 TNHIKSHMGVRDILCPI--CKKGFIALKHMKTHLKKHMWKAGEIPLEDTYLCDL--CSKV 1930
+ +R +C C K + H+K H + H GE P + C C +
Sbjct: 6 SGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTH---TGEKP----FSCSWKGCERR 58
Query: 1931 FLEHKDMIRHR 1941
F ++ RHR
Sbjct: 59 FARSDELSRHR 69
Score = 29.3 bits (66), Expect = 2.4
Identities = 13/47 (27%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Query: 1452 PVCHKTYSTPRQMRIHLREAHSQKKYACDV--CGKQFTSTNRVSQHK 1496
P C KTY ++ H R +K ++C C ++F ++ +S+H+
Sbjct: 23 PGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHR 69
Score = 28.9 bits (65), Expect = 3.0
Identities = 8/38 (21%), Positives = 12/38 (31%), Gaps = 2/38 (5%)
Query: 1989 LKAHILRCQGERPYKCDV--CGSSFKDKKHFSVHIRNH 2024
+ R + C CG ++ H H R H
Sbjct: 5 SSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTH 42
Score = 28.5 bits (64), Expect = 3.7
Identities = 17/75 (22%), Positives = 27/75 (36%), Gaps = 11/75 (14%)
Query: 914 KSFLSEHINTHTGNKPYQCQI--CKKSFANKRSYQRDLKRHKQLAGQLKPEDIHECKI-- 969
S S + + + C C K++ K S+ LK H + KP C
Sbjct: 2 SSGSSGPQIDSSRIRSHICSHPGCGKTYF-KSSH---LKAHTRTHTGEKP---FSCSWKG 54
Query: 970 CHKTFLEKGSLAKHM 984
C + F L++H
Sbjct: 55 CERRFARSDELSRHR 69
Score = 27.7 bits (62), Expect = 6.7
Identities = 15/56 (26%), Positives = 25/56 (44%), Gaps = 5/56 (8%)
Query: 1793 EKTKLCPV--CNKEYATPVTMRKHLREVHVSKKKFKCDL--CQKQFKASRSLQCHK 1844
++ +C C K Y ++ H R H +K F C C+++F S L H+
Sbjct: 15 IRSHICSHPGCGKTYFKSSHLKAHTR-THTGEKPFSCSWKGCERRFARSDELSRHR 69
>2ent_A Krueppel-like factor 15; zinc binding, transcription factor,
adipogenesis, CLCNKA, chloride channel Ka, rhodopsin,
IRBP; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 48
Score = 51.1 bits (123), Expect = 2e-08
Identities = 15/43 (34%), Positives = 18/43 (41%), Gaps = 2/43 (4%)
Query: 1037 LKCHTGERPYKCDV--CGSSFKDKWYLGVHMRKHNGEKPYNCD 1077
TGE+P+ C CG F L H R H+G KP
Sbjct: 4 GSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPS 46
Score = 43.8 bits (104), Expect = 7e-06
Identities = 16/45 (35%), Positives = 19/45 (42%), Gaps = 5/45 (11%)
Query: 1009 HMLSHTGEKPFCCH--ICGK--SLKGNLKDHILKCHTGERPYKCD 1049
S TGEKPF C CG S L H + H+G +P
Sbjct: 3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRH-RRSHSGVKPSGPS 46
Score = 41.1 bits (97), Expect = 8e-05
Identities = 11/37 (29%), Positives = 16/37 (43%), Gaps = 2/37 (5%)
Query: 1062 GVHMRKHNGEKPYNCDY--CGQTFAARSTFTFHLKKH 1096
G GEKP+ C + CG F+ + H + H
Sbjct: 1 GSSGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSH 37
Score = 39.6 bits (93), Expect = 2e-04
Identities = 12/39 (30%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
Query: 1506 TIQRKFECDF--CKKKFYRNFDLQEHINTHTGNKPYQCQ 1542
T ++ F C + C +F R+ +L H +H+G KP
Sbjct: 8 TGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPS 46
Score = 39.2 bits (92), Expect = 3e-04
Identities = 15/44 (34%), Positives = 16/44 (36%), Gaps = 4/44 (9%)
Query: 1966 HMLSHTGEKPFCCD--ICGK--SLKGNLKAHILRCQGERPYKCD 2005
S TGEKPF C CG S L H G +P
Sbjct: 3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPS 46
Score = 35.0 bits (81), Expect = 0.012
Identities = 13/39 (33%), Positives = 18/39 (46%), Gaps = 3/39 (7%)
Query: 1352 TGNK-FECIY--CKKKYRRKFDLKEHINKHTGNKPYHCQ 1387
TG K F C + C ++ R +L H H+G KP
Sbjct: 8 TGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPS 46
Score = 34.6 bits (80), Expect = 0.015
Identities = 12/36 (33%), Positives = 18/36 (50%), Gaps = 6/36 (16%)
Query: 920 HINTHTGNKPYQCQ--ICKKSFANKRSYQRDLKRHK 953
++ TG KP+ C C F+ RS + L RH+
Sbjct: 3 SGSSGTGEKPFACTWPGCGWRFS--RSDE--LSRHR 34
Score = 34.2 bits (79), Expect = 0.017
Identities = 13/39 (33%), Positives = 18/39 (46%), Gaps = 2/39 (5%)
Query: 897 TIERKFECDY--CKMKFKSKSFLSEHINTHTGNKPYQCQ 933
T E+ F C + C +F LS H +H+G KP
Sbjct: 8 TGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPS 46
Score = 34.2 bits (79), Expect = 0.022
Identities = 12/44 (27%), Positives = 16/44 (36%), Gaps = 4/44 (9%)
Query: 1940 HREWVHGDKCHVCKV--CGAKI--KGNMKRHMLSHTGEKPFCCD 1979
G+K C CG + + RH SH+G KP
Sbjct: 3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPS 46
Score = 33.4 bits (77), Expect = 0.038
Identities = 12/43 (27%), Positives = 17/43 (39%), Gaps = 4/43 (9%)
Query: 983 HMNWVHGDKCHICKV--CGAKI--KGNLQKHMLSHTGEKPFCC 1021
+ G+K C CG + L +H SH+G KP
Sbjct: 3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGP 45
Score = 31.5 bits (72), Expect = 0.16
Identities = 10/36 (27%), Positives = 15/36 (41%), Gaps = 2/36 (5%)
Query: 631 DKKYECD--SCNKKFWSKRALSEHMIIHTGIKEHQC 664
+K + C C +F LS H H+G+K
Sbjct: 10 EKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGP 45
Score = 30.0 bits (68), Expect = 0.72
Identities = 11/36 (30%), Positives = 15/36 (41%), Gaps = 2/36 (5%)
Query: 1991 AHILRCQGERPYKCDV--CGSSFKDKKHFSVHIRNH 2024
+ GE+P+ C CG F S H R+H
Sbjct: 2 SSGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSH 37
Score = 28.8 bits (65), Expect = 1.6
Identities = 11/35 (31%), Positives = 12/35 (34%), Gaps = 2/35 (5%)
Query: 652 HMIIHTGIKEHQCHV--CNTAFYHIRSLSRHLKIH 684
TG K C C F LSRH + H
Sbjct: 3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSH 37
Score = 27.7 bits (62), Expect = 4.9
Identities = 10/35 (28%), Positives = 14/35 (40%), Gaps = 6/35 (17%)
Query: 1374 HINKHTGNKPYHCQ--ICKESFYTLKTYRGDLKRH 1406
+ TG KP+ C C F + +L RH
Sbjct: 3 SGSSGTGEKPFACTWPGCGWRF----SRSDELSRH 33
Score = 26.9 bits (60), Expect = 7.3
Identities = 7/51 (13%), Positives = 19/51 (37%), Gaps = 9/51 (17%)
Query: 857 HLREVHSSQKKYVCD--MCGKQFTSNNRVSQHKAYSHFGIIKTIERKFECD 905
+ +K + C CG +F+ ++ +S+H+ + +
Sbjct: 3 SGS-SGTGEKPFACTWPGCGWRFSRSDELSRHRR------SHSGVKPSGPS 46
>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA;
NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A
4znf_A
Length = 57
Score = 50.5 bits (120), Expect = 4e-08
Identities = 18/51 (35%), Positives = 25/51 (49%)
Query: 1046 YKCDVCGSSFKDKWYLGVHMRKHNGEKPYNCDYCGQTFAARSTFTFHLKKH 1096
Y C+ CG K L H+R H +PY+C YC +F + T H+K
Sbjct: 2 YICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSK 52
Score = 48.9 bits (116), Expect = 1e-07
Identities = 21/54 (38%), Positives = 24/54 (44%), Gaps = 3/54 (5%)
Query: 1021 CHICGKSL--KGNLKDHILKCHTGERPYKCDVCGSSFKDKWYLGVHMRKHNGEK 1072
C CG LK H ++ HT RPY C C SFK K L HM+ K
Sbjct: 4 CEECGIRXKKPSMLKKH-IRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK 56
Score = 45.5 bits (107), Expect = 3e-06
Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 7/63 (11%)
Query: 598 RYMCDICGKQFTTLSYLDLHRKSHNETVKRKEEDKKYECDSCNKKFWSKRALSEHMIIHT 657
+Y+C+ CG + S L H ++H + + Y C CN F +K L++HM
Sbjct: 1 KYICEECGIRXKKPSMLKKHIRTHT-------DVRPYHCTYCNFSFKTKGNLTKHMKSKA 53
Query: 658 GIK 660
K
Sbjct: 54 HSK 56
Score = 43.9 bits (103), Expect = 9e-06
Identities = 20/52 (38%), Positives = 29/52 (55%)
Query: 1510 KFECDFCKKKFYRNFDLQEHINTHTGNKPYQCQICNKSFGTRRNYRLHLKRH 1561
K+ C+ C + + L++HI THT +PY C CN SF T+ N H+K
Sbjct: 1 KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSK 52
Score = 43.2 bits (101), Expect = 2e-05
Identities = 18/53 (33%), Positives = 24/53 (45%), Gaps = 2/53 (3%)
Query: 1978 CDICGKSL--KGNLKAHILRCQGERPYKCDVCGSSFKDKKHFSVHIRNHGEDK 2028
C+ CG LK HI RPY C C SFK K + + H+++ K
Sbjct: 4 CEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK 56
Score = 41.2 bits (96), Expect = 8e-05
Identities = 19/52 (36%), Positives = 28/52 (53%)
Query: 901 KFECDYCKMKFKSKSFLSEHINTHTGNKPYQCQICKKSFANKRSYQRDLKRH 952
K+ C+ C ++ K S L +HI THT +PY C C SF K + + +K
Sbjct: 1 KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSK 52
Score = 40.9 bits (95), Expect = 1e-04
Identities = 15/52 (28%), Positives = 27/52 (51%)
Query: 633 KYECDSCNKKFWSKRALSEHMIIHTGIKEHQCHVCNTAFYHIRSLSRHLKIH 684
KY C+ C + L +H+ HT ++ + C CN +F +L++H+K
Sbjct: 1 KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSK 52
Score = 39.7 bits (92), Expect = 3e-04
Identities = 17/62 (27%), Positives = 30/62 (48%), Gaps = 6/62 (9%)
Query: 867 KYVCDMCGKQFTSNNRVSQHKAYSHFGIIKTIERKFECDYCKMKFKSKSFLSEHINTHTG 926
KY+C+ CG + + + +H T R + C YC FK+K L++H+ +
Sbjct: 1 KYICEECGIRXKKPSMLKKHIR------THTDVRPYHCTYCNFSFKTKGNLTKHMKSKAH 54
Query: 927 NK 928
+K
Sbjct: 55 SK 56
Score = 37.8 bits (87), Expect = 0.001
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 4/55 (7%)
Query: 1950 HVCKVCG--AKIKGNMKRHMLSHTGEKPFCCDICGKSL--KGNLKAHILRCQGER 2000
++C+ CG K +K+H+ +HT +P+ C C S KGNL H+ +
Sbjct: 2 YICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK 56
Score = 37.4 bits (86), Expect = 0.002
Identities = 17/55 (30%), Positives = 23/55 (41%), Gaps = 2/55 (3%)
Query: 965 HECKICHKTFLEKGSLAKHMNWVHGDKCHICKVCG--AKIKGNLQKHMLSHTGEK 1017
+ C+ C + L KH+ + + C C K KGNL KHM S K
Sbjct: 2 YICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK 56
Score = 37.4 bits (86), Expect = 0.002
Identities = 14/62 (22%), Positives = 26/62 (41%), Gaps = 6/62 (9%)
Query: 1476 KYACDVCGKQFTSTNRVSQHKAHSHFGIIKTIQRKFECDFCKKKFYRNFDLQEHINTHTG 1535
KY C+ CG + + + +H T R + C +C F +L +H+ +
Sbjct: 1 KYICEECGIRXKKPSMLKKHIR------THTDVRPYHCTYCNFSFKTKGNLTKHMKSKAH 54
Query: 1536 NK 1537
+K
Sbjct: 55 SK 56
Score = 37.4 bits (86), Expect = 0.002
Identities = 18/52 (34%), Positives = 25/52 (48%)
Query: 1355 KFECIYCKKKYRRKFDLKEHINKHTGNKPYHCQICKESFYTLKTYRGDLKRH 1406
K+ C C + ++ LK+HI HT +PYHC C SF T +K
Sbjct: 1 KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSK 52
Score = 37.4 bits (86), Expect = 0.002
Identities = 13/59 (22%), Positives = 29/59 (49%), Gaps = 4/59 (6%)
Query: 1325 RYLCDICGKQFTSTNRVNIHKACVHSSTGNK-FECIYCKKKYRRKFDLKEHINKHTGNK 1382
+Y+C+ CG + + + H + + T + + C YC ++ K +L +H+ +K
Sbjct: 1 KYICEECGIRXKKPSMLKKH---IRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK 56
Score = 35.5 bits (81), Expect = 0.009
Identities = 14/55 (25%), Positives = 23/55 (41%), Gaps = 2/55 (3%)
Query: 1922 YLCDLCSKVFLEHKDMIRHREWVHGDKCHVCKVCG--AKIKGNMKRHMLSHTGEK 1974
Y+C+ C + + +H + + C C K KGN+ +HM S K
Sbjct: 2 YICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK 56
Score = 33.5 bits (76), Expect = 0.044
Identities = 12/50 (24%), Positives = 21/50 (42%)
Query: 1860 ECDYCSRKFPSKNEVTNHIKSHMGVRDILCPICKKGFIALKHMKTHLKKH 1909
C+ C + + + HI++H VR C C F ++ H+K
Sbjct: 3 ICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSK 52
Score = 33.2 bits (75), Expect = 0.059
Identities = 15/50 (30%), Positives = 21/50 (42%), Gaps = 1/50 (2%)
Query: 572 CPICEKIFAAPKQMRMHLRHVHSSIKRYMCDICGKQFTTLSYLDLHRKSH 621
C C P ++ H+R H+ ++ Y C C F T L H KS
Sbjct: 4 CEECGIRXKKPSMLKKHIR-THTDVRPYHCTYCNFSFKTKGNLTKHMKSK 52
Score = 33.2 bits (75), Expect = 0.067
Identities = 15/56 (26%), Positives = 23/56 (41%), Gaps = 2/56 (3%)
Query: 398 KFICDICGKQFTSNIHASRHKNYAHSRDRQKMECDYCKRKFTCKRYLAEHINAHTG 453
K+IC+ CG + +H H+ R C YC F K L +H+ +
Sbjct: 1 KYICEECGIRXKKPSMLKKHIR-THTDVR-PYHCTYCNFSFKTKGNLTKHMKSKAH 54
Score = 32.4 bits (73), Expect = 0.10
Identities = 12/48 (25%), Positives = 21/48 (43%), Gaps = 1/48 (2%)
Query: 841 CPVCHKTYSTPKSMRKHLREVHSSQKKYVCDMCGKQFTSNNRVSQHKA 888
C C P ++KH+R H+ + Y C C F + +++H
Sbjct: 4 CEECGIRXKKPSMLKKHIR-THTDVRPYHCTYCNFSFKTKGNLTKHMK 50
Score = 32.4 bits (73), Expect = 0.12
Identities = 10/48 (20%), Positives = 18/48 (37%)
Query: 1450 KCPVCHKTYSTPRQMRIHLREAHSQKKYACDVCGKQFTSTNRVSQHKA 1497
C C P ++ H+R + Y C C F + +++H
Sbjct: 3 ICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMK 50
Score = 32.0 bits (72), Expect = 0.18
Identities = 12/48 (25%), Positives = 19/48 (39%), Gaps = 1/48 (2%)
Query: 1299 CPVCHKTYSTPKTMRRHLRQVHTSQKRYLCDICGKQFTSTNRVNIHKA 1346
C C P +++H+R HT + Y C C F + + H
Sbjct: 4 CEECGIRXKKPSMLKKHIR-THTDVRPYHCTYCNFSFKTKGNLTKHMK 50
Score = 31.6 bits (71), Expect = 0.22
Identities = 17/62 (27%), Positives = 25/62 (40%), Gaps = 7/62 (11%)
Query: 1539 YQCQICNKSFGTRRNYRLHLKRHKRSAGQLKPEDIHECKICHKIFLENSRLTRHMNFTHG 1598
Y C+ C R LK+H R+ ++P + C C+ F LT+HM
Sbjct: 2 YICEECGI----RXKKPSMLKKHIRTHTDVRP---YHCTYCNFSFKTKGNLTKHMKSKAH 54
Query: 1599 DK 1600
K
Sbjct: 55 SK 56
Score = 31.2 bits (70), Expect = 0.27
Identities = 13/47 (27%), Positives = 19/47 (40%)
Query: 430 ECDYCKRKFTCKRYLAEHINAHTGNTIYGCRICKKTFLYTNGLRRHI 476
C+ C + L +HI HT Y C C +F L +H+
Sbjct: 3 ICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHM 49
Score = 30.1 bits (67), Expect = 0.70
Identities = 13/48 (27%), Positives = 20/48 (41%), Gaps = 1/48 (2%)
Query: 1798 CPVCNKEYATPVTMRKHLREVHVSKKKFKCDLCQKQFKASRSLQCHKQ 1845
C C P ++KH+R H + + C C FK +L H +
Sbjct: 4 CEECGIRXKKPSMLKKHIR-THTDVRPYHCTYCNFSFKTKGNLTKHMK 50
Score = 29.3 bits (65), Expect = 1.3
Identities = 14/62 (22%), Positives = 23/62 (37%), Gaps = 7/62 (11%)
Query: 930 YQCQICKKSFANKRSYQRDLKRHKQLAGQLKPEDIHECKICHKTFLEKGSLAKHMNWVHG 989
Y C+ C ++ ++ H + C C+ +F KG+L KHM
Sbjct: 2 YICEECGIRXKKPSMLKKHIRTHTD-------VRPYHCTYCNFSFKTKGNLTKHMKSKAH 54
Query: 990 DK 991
K
Sbjct: 55 SK 56
Score = 28.1 bits (62), Expect = 4.5
Identities = 12/57 (21%), Positives = 21/57 (36%), Gaps = 2/57 (3%)
Query: 662 HQCHVCNTAFYHIRSLSRHLKIHEYNESKMYKCPVCSKMFTELYEMKRHRDHKHGGK 718
+ C C L +H++ H + + Y C C+ F + +H K K
Sbjct: 2 YICEECGIRXKKPSMLKKHIRTH--TDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK 56
>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc
finger domain, structural genomics, NPPSFA; NMR {Homo
sapiens} SCOP: g.37.1.1
Length = 48
Score = 49.6 bits (118), Expect = 8e-08
Identities = 13/40 (32%), Positives = 21/40 (52%)
Query: 1040 HTGERPYKCDVCGSSFKDKWYLGVHMRKHNGEKPYNCDYC 1079
+ C++CG F+D ++L H H+GEKPY+
Sbjct: 7 GRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPS 46
Score = 43.8 bits (103), Expect = 9e-06
Identities = 11/41 (26%), Positives = 19/41 (46%)
Query: 1505 KTIQRKFECDFCKKKFYRNFDLQEHINTHTGNKPYQCQICN 1545
+++ C+ C K F + L H +H+G KPY +
Sbjct: 7 GRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSS 47
Score = 41.1 bits (96), Expect = 8e-05
Identities = 10/40 (25%), Positives = 17/40 (42%)
Query: 896 KTIERKFECDYCKMKFKSKSFLSEHINTHTGNKPYQCQIC 935
++ C+ C F+ L+ H +H+G KPY
Sbjct: 7 GRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPS 46
Score = 40.3 bits (94), Expect = 1e-04
Identities = 13/38 (34%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Query: 1946 GDKCHVCKVCGA--KIKGNMKRHMLSHTGEKPFCCDIC 1981
K C++CG + ++ RH LSH+GEKP+
Sbjct: 9 TRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPS 46
Score = 38.4 bits (89), Expect = 7e-04
Identities = 13/38 (34%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Query: 989 GDKCHICKVCGA--KIKGNLQKHMLSHTGEKPFCCHIC 1024
K C++CG + +L +H LSH+GEKP+
Sbjct: 9 TRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPS 46
Score = 38.0 bits (88), Expect = 0.001
Identities = 10/46 (21%), Positives = 18/46 (39%)
Query: 623 ETVKRKEEDKKYECDSCNKKFWSKRALSEHMIIHTGIKEHQCHVCN 668
+ K+ C+ C K F L+ H + H+G K + +
Sbjct: 2 SSGSSGRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSS 47
Score = 37.2 bits (86), Expect = 0.002
Identities = 11/35 (31%), Positives = 15/35 (42%)
Query: 1355 KFECIYCKKKYRRKFDLKEHINKHTGNKPYHCQIC 1389
+ C C K +R + L H H+G KPY
Sbjct: 12 QVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPS 46
Score = 36.8 bits (85), Expect = 0.002
Identities = 15/42 (35%), Positives = 19/42 (45%), Gaps = 3/42 (7%)
Query: 1012 SHTGEKPFCCHICGKSLKG--NLKDHILKCHTGERPYKCDVC 1051
S K C ICGK + +L H L H+GE+PY
Sbjct: 6 SGRTRKQVACEICGKIFRDVYHLNRHKLS-HSGEKPYSSGPS 46
Score = 34.5 bits (79), Expect = 0.015
Identities = 9/32 (28%), Positives = 17/32 (53%)
Query: 1997 QGERPYKCDVCGSSFKDKKHFSVHIRNHGEDK 2028
+ + C++CG F+D H + H +H +K
Sbjct: 8 RTRKQVACEICGKIFRDVYHLNRHKLSHSGEK 39
Score = 34.5 bits (79), Expect = 0.015
Identities = 13/48 (27%), Positives = 23/48 (47%), Gaps = 7/48 (14%)
Query: 593 HSSIKRYMCDICGKQFTTLSYLDLHRKSHNETVKRKEEDKKYECDSCN 640
+ K+ C+ICGK F + +L+ H+ SH+ +K Y +
Sbjct: 7 GRTRKQVACEICGKIFRDVYHLNRHKLSHS-------GEKPYSSGPSS 47
Score = 34.5 bits (79), Expect = 0.015
Identities = 14/41 (34%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 1969 SHTGEKPFCCDICGKSLKG--NLKAHILRCQGERPYKCDVC 2007
S K C+ICGK + +L H L GE+PY
Sbjct: 6 SGRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPS 46
Score = 32.2 bits (73), Expect = 0.11
Identities = 14/33 (42%), Positives = 16/33 (48%), Gaps = 4/33 (12%)
Query: 1532 THTGNKPYQCQICNKSFGTRRNYRLHLKRHKRS 1564
+ K C+IC K F R Y HL RHK S
Sbjct: 6 SGRTRKQVACEICGKIF--RDVY--HLNRHKLS 34
Score = 31.8 bits (72), Expect = 0.15
Identities = 10/40 (25%), Positives = 18/40 (45%)
Query: 423 SRDRQKMECDYCKRKFTCKRYLAEHINAHTGNTIYGCRIC 462
R R+++ C+ C + F +L H +H+G Y
Sbjct: 7 GRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPS 46
Score = 30.7 bits (69), Expect = 0.43
Identities = 8/32 (25%), Positives = 12/32 (37%), Gaps = 4/32 (12%)
Query: 1066 RKHNGEKPYNCDYCGQTFAARSTFTFHLKKHE 1097
K C+ CG+ F HL +H+
Sbjct: 5 SSGRTRKQVACEICGKIFRDVY----HLNRHK 32
Score = 30.7 bits (69), Expect = 0.44
Identities = 10/23 (43%), Positives = 14/23 (60%)
Query: 396 ERKFICDICGKQFTSNIHASRHK 418
++ C+ICGK F H +RHK
Sbjct: 10 RKQVACEICGKIFRDVYHLNRHK 32
Score = 29.9 bits (67), Expect = 0.67
Identities = 11/39 (28%), Positives = 16/39 (41%), Gaps = 2/39 (5%)
Query: 660 KEHQCHVCNTAFYHIRSLSRHLKIHEYNESKMYKCPVCS 698
K+ C +C F + L+RH H + K Y S
Sbjct: 11 KQVACEICGKIFRDVYHLNRHKLSH--SGEKPYSSGPSS 47
Score = 29.5 bits (66), Expect = 0.89
Identities = 10/38 (26%), Positives = 17/38 (44%)
Query: 688 ESKMYKCPVCSKMFTELYEMKRHRDHKHGGKCHVCKIC 725
K C +C K+F ++Y + RH+ G K +
Sbjct: 9 TRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPS 46
Score = 28.4 bits (63), Expect = 2.3
Identities = 12/38 (31%), Positives = 17/38 (44%), Gaps = 2/38 (5%)
Query: 367 KSKQCPLCTKIFTTAKHMRVHLRSVHNGKERKFICDIC 404
K C +C KIF H+ H S H+G E+ +
Sbjct: 11 KQVACEICGKIFRDVYHLNRHKLS-HSG-EKPYSSGPS 46
Score = 27.6 bits (61), Expect = 4.9
Identities = 12/44 (27%), Positives = 18/44 (40%), Gaps = 2/44 (4%)
Query: 745 RKKSKDSFHCDTCGKYFRSRQICNKHIKRVHLNPTKTFKCDLCS 788
+++ C+ CGK FR N+H K H K + S
Sbjct: 6 SGRTRKQVACEICGKIFRDVYHLNRH-KLSHSG-EKPYSSGPSS 47
Score = 26.8 bits (59), Expect = 9.0
Identities = 10/31 (32%), Positives = 13/31 (41%), Gaps = 4/31 (12%)
Query: 923 THTGNKPYQCQICKKSFANKRSYQRDLKRHK 953
+ K C+IC K F + L RHK
Sbjct: 6 SGRTRKQVACEICGKIFRDVYH----LNRHK 32
Score = 26.8 bits (59), Expect = 9.0
Identities = 8/33 (24%), Positives = 13/33 (39%), Gaps = 1/33 (3%)
Query: 1299 CPVCHKTYSTPKTMRRHLRQVHTSQKRYLCDIC 1331
C +C K + + RH H+ +K Y
Sbjct: 15 CEICGKIFRDVYHLNRHKL-SHSGEKPYSSGPS 46
>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 73
Score = 50.0 bits (119), Expect = 1e-07
Identities = 12/71 (16%), Positives = 21/71 (29%), Gaps = 6/71 (8%)
Query: 1004 GNLQKHMLSHTGEKPFCCHICGKSLKGNLKDHILKCHTGERPYKCDVCGSSFKDKWYLGV 1063
G+ K H G++ C CG + + C+ C + L
Sbjct: 4 GSSGKRQKIHLGDRSQKCSKCGIIFIRRST------LSRRKTPMCEKCRKDSCQEAALNK 57
Query: 1064 HMRKHNGEKPY 1074
+G+K
Sbjct: 58 DEGNESGKKTS 68
Score = 45.4 bits (107), Expect = 5e-06
Identities = 10/68 (14%), Positives = 18/68 (26%), Gaps = 5/68 (7%)
Query: 1961 GNMKRHMLSHTGEKPFCCDICGKSLKGNLKAHILRCQGERPYKCDVCGSSFKDKKHFSVH 2020
G+ + H G++ C CG + C+ C + +
Sbjct: 4 GSSGKRQKIHLGDRSQKCSKCGIIF-----IRRSTLSRRKTPMCEKCRKDSCQEAALNKD 58
Query: 2021 IRNHGEDK 2028
N K
Sbjct: 59 EGNESGKK 66
Score = 42.7 bits (100), Expect = 3e-05
Identities = 12/59 (20%), Positives = 18/59 (30%), Gaps = 7/59 (11%)
Query: 1038 KCHTGERPYKCDVCGSSFKDKWYLGVHMRKHNGEKPYNCDYCGQTFAARSTFTFHLKKH 1096
K H G+R KC CG F + + K C+ C + +
Sbjct: 11 KIHLGDRSQKCSKCGIIF-------IRRSTLSRRKTPMCEKCRKDSCQEAALNKDEGNE 62
Score = 41.6 bits (97), Expect = 1e-04
Identities = 14/81 (17%), Positives = 28/81 (34%), Gaps = 14/81 (17%)
Query: 850 TPKSMRKHLREVHSSQKKYVCDMCGKQFTSNNRVSQHKAYSHFGIIKTIERKFECDYCKM 909
+ S K + +H + C CG F + +S+ K C+ C+
Sbjct: 2 SSGSSGKRQK-IHLGDRSQKCSKCGIIFIRRSTLSRRKTP-------------MCEKCRK 47
Query: 910 KFKSKSFLSEHINTHTGNKPY 930
++ L++ +G K
Sbjct: 48 DSCQEAALNKDEGNESGKKTS 68
Score = 40.4 bits (94), Expect = 2e-04
Identities = 16/81 (19%), Positives = 26/81 (32%), Gaps = 14/81 (17%)
Query: 1526 LQEHINTHTGNKPYQCQICNKSFGTRRNYRLHLKRHKRSAGQLKPEDIHECKICHKIFLE 1585
+ H G++ +C C F R L R K C+ C K +
Sbjct: 6 SGKRQKIHLGDRSQKCSKCGIIF----IRRSTLSRRKTP----------MCEKCRKDSCQ 51
Query: 1586 NSRLTRHMNFTHGDKCHGATN 1606
+ L + G K G ++
Sbjct: 52 EAALNKDEGNESGKKTSGPSS 72
Score = 40.4 bits (94), Expect = 3e-04
Identities = 16/81 (19%), Positives = 30/81 (37%), Gaps = 17/81 (20%)
Query: 1459 STPRQMRIHLREAHSQKKYACDVCGKQFTSTNRVSQHKAHSHFGIIKTIQRKFECDFCKK 1518
S+ ++ +IHL + + C CG F + +S+ K C+ C+K
Sbjct: 5 SSGKRQKIHLGD----RSQKCSKCGIIFIRRSTLSRRK-------------TPMCEKCRK 47
Query: 1519 KFYRNFDLQEHINTHTGNKPY 1539
+ L + +G K
Sbjct: 48 DSCQEAALNKDEGNESGKKTS 68
Score = 38.1 bits (88), Expect = 0.002
Identities = 15/81 (18%), Positives = 24/81 (29%), Gaps = 15/81 (18%)
Query: 580 AAPKQMRMHLRHVHSSIKRYMCDICGKQFTTLSYLDLHRKSHNETVKRKEEDKKYECDSC 639
+ + +H + C CG F S L K C+ C
Sbjct: 1 GSSGSSGKRQK-IHLGDRSQKCSKCGIIFIRRSTL--------------SRRKTPMCEKC 45
Query: 640 NKKFWSKRALSEHMIIHTGIK 660
K + AL++ +G K
Sbjct: 46 RKDSCQEAALNKDEGNESGKK 66
Score = 37.7 bits (87), Expect = 0.002
Identities = 14/79 (17%), Positives = 24/79 (30%), Gaps = 14/79 (17%)
Query: 913 SKSFLSEHINTHTGNKPYQCQICKKSFANKRSYQRDLKRHKQLAGQLKPEDIHECKICHK 972
S + H G++ +C C F + + R C+ C K
Sbjct: 2 SSGSSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSR--------------RKTPMCEKCRK 47
Query: 973 TFLEKGSLAKHMNWVHGDK 991
++ +L K G K
Sbjct: 48 DSCQEAALNKDEGNESGKK 66
Score = 36.9 bits (85), Expect = 0.004
Identities = 12/77 (15%), Positives = 26/77 (33%), Gaps = 10/77 (12%)
Query: 1308 TPKTMRRHLRQVHTSQKRYLCDICGKQFTSTNRVNIHKACVHSSTGNKFECIYCKKKYRR 1367
+ + + + +H + C CG F + ++ K C C+K +
Sbjct: 2 SSGSSGKRQK-IHLGDRSQKCSKCGIIFIRRSTLSRRK---------TPMCEKCRKDSCQ 51
Query: 1368 KFDLKEHINKHTGNKPY 1384
+ L + +G K
Sbjct: 52 EAALNKDEGNESGKKTS 68
Score = 36.9 bits (85), Expect = 0.004
Identities = 16/74 (21%), Positives = 26/74 (35%), Gaps = 9/74 (12%)
Query: 645 SKRALSEHMIIHTGIKEHQCHVCNTAFYHIRSLSRHLKIHEYNESKMYKCPVCSKMFTEL 704
S + + IH G + +C C F +LSR K C C K +
Sbjct: 2 SSGSSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSRR---------KTPMCEKCRKDSCQE 52
Query: 705 YEMKRHRDHKHGGK 718
+ + ++ G K
Sbjct: 53 AALNKDEGNESGKK 66
Score = 36.9 bits (85), Expect = 0.004
Identities = 16/80 (20%), Positives = 27/80 (33%), Gaps = 15/80 (18%)
Query: 379 TTAKHMRVHLRSVHNGKERKFICDICGKQFTSNIHASRHKNYAHSRDRQKMECDYCKRKF 438
++ K ++HL +R C CG F SR K C+ C++
Sbjct: 5 SSGKRQKIHL------GDRSQKCSKCGIIFIRRSTLSRRKTP---------MCEKCRKDS 49
Query: 439 TCKRYLAEHINAHTGNTIYG 458
+ L + +G G
Sbjct: 50 CQEAALNKDEGNESGKKTSG 69
Score = 35.0 bits (80), Expect = 0.022
Identities = 14/71 (19%), Positives = 21/71 (29%), Gaps = 8/71 (11%)
Query: 978 GSLAKHMNWVHGDKCHICKVCGAKIKGNLQKHMLSHTGEKPFCCHICGKSL--KGNLKDH 1035
GS K GD+ C CG + + K C C K + L
Sbjct: 4 GSSGKRQKIHLGDRSQKCSKCGIIF-----IRRSTLSRRKTPMCEKCRKDSCQEAALNKD 58
Query: 1036 ILKCHTGERPY 1046
+G++
Sbjct: 59 -EGNESGKKTS 68
Score = 34.6 bits (79), Expect = 0.026
Identities = 10/32 (31%), Positives = 14/32 (43%)
Query: 1061 LGVHMRKHNGEKPYNCDYCGQTFAARSTFTFH 1092
G + H G++ C CG F RST +
Sbjct: 6 SGKRQKIHLGDRSQKCSKCGIIFIRRSTLSRR 37
Score = 29.2 bits (65), Expect = 2.3
Identities = 11/78 (14%), Positives = 23/78 (29%), Gaps = 14/78 (17%)
Query: 1806 ATPVTMRKHLREVHVSKKKFKCDLCQKQFKASRSLQCHKQFVHLGVHKPKFLNMECDYCS 1865
+ + K + +H+ + KC C F +L K C+ C
Sbjct: 1 GSSGSSGKRQK-IHLGDRSQKCSKCGIIFIRRSTLSRRKTP-------------MCEKCR 46
Query: 1866 RKFPSKNEVTNHIKSHMG 1883
+ + + + G
Sbjct: 47 KDSCQEAALNKDEGNESG 64
Score = 29.2 bits (65), Expect = 2.5
Identities = 11/68 (16%), Positives = 21/68 (30%), Gaps = 7/68 (10%)
Query: 1937 MIRHREWVHGDKCHVCKVCGAKIKGNMKRHMLSHTGEKPFCCDICGKSL--KGNLKAHIL 1994
+ ++ GD+ C CG + + K C+ C K + L
Sbjct: 6 SGKRQKIHLGDRSQKCSKCGIIF-----IRRSTLSRRKTPMCEKCRKDSCQEAALNKDEG 60
Query: 1995 RCQGERPY 2002
G++
Sbjct: 61 NESGKKTS 68
Score = 28.9 bits (64), Expect = 2.9
Identities = 9/53 (16%), Positives = 19/53 (35%), Gaps = 9/53 (16%)
Query: 366 SKSKQCPLCTKIFTTAKHMRVHLRSVHNGKERKFICDICGKQFTSNIHASRHK 418
+S++C C IF R + + +C+ C K ++ +
Sbjct: 16 DRSQKCSKCGIIFI---------RRSTLSRRKTPMCEKCRKDSCQEAALNKDE 59
>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 42
Score = 47.3 bits (113), Expect = 3e-07
Identities = 11/37 (29%), Positives = 17/37 (45%)
Query: 1040 HTGERPYKCDVCGSSFKDKWYLGVHMRKHNGEKPYNC 1076
+GE+PY C C +F D L H + H + +
Sbjct: 5 SSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSS 41
Score = 38.8 bits (91), Expect = 4e-04
Identities = 12/39 (30%), Positives = 16/39 (41%), Gaps = 3/39 (7%)
Query: 1012 SHTGEKPFCCHICGK--SLKGNLKDHILKCHTGERPYKC 1048
+GEKP+ C C + S L H K HT +
Sbjct: 4 GSSGEKPYSCAECKETFSDNNRLVQHQ-KMHTVKSGPSS 41
Score = 36.5 bits (85), Expect = 0.002
Identities = 9/32 (28%), Positives = 16/32 (50%), Gaps = 4/32 (12%)
Query: 1532 THTGNKPYQCQICNKSFGTRRNYRLHLKRHKR 1563
+G KPY C C ++F + L +H++
Sbjct: 4 GSSGEKPYSCAECKETF----SDNNRLVQHQK 31
Score = 36.5 bits (85), Expect = 0.002
Identities = 12/29 (41%), Positives = 17/29 (58%)
Query: 1068 HNGEKPYNCDYCGQTFAARSTFTFHLKKH 1096
+GEKPY+C C +TF+ + H K H
Sbjct: 5 SSGEKPYSCAECKETFSDNNRLVQHQKMH 33
Score = 34.6 bits (80), Expect = 0.011
Identities = 10/27 (37%), Positives = 13/27 (48%)
Query: 1998 GERPYKCDVCGSSFKDKKHFSVHIRNH 2024
GE+PY C C +F D H + H
Sbjct: 7 GEKPYSCAECKETFSDNNRLVQHQKMH 33
Score = 33.8 bits (78), Expect = 0.021
Identities = 8/20 (40%), Positives = 13/20 (65%)
Query: 923 THTGNKPYQCQICKKSFANK 942
+G KPY C CK++F++
Sbjct: 4 GSSGEKPYSCAECKETFSDN 23
Score = 31.9 bits (73), Expect = 0.100
Identities = 9/36 (25%), Positives = 15/36 (41%)
Query: 1506 TIQRKFECDFCKKKFYRNFDLQEHINTHTGNKPYQC 1541
+ ++ + C CK+ F N L +H HT
Sbjct: 6 SGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSS 41
Score = 31.9 bits (73), Expect = 0.13
Identities = 9/38 (23%), Positives = 13/38 (34%), Gaps = 2/38 (5%)
Query: 1969 SHTGEKPFCCDICGK--SLKGNLKAHILRCQGERPYKC 2004
+GEKP+ C C + S L H +
Sbjct: 4 GSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSS 41
Score = 31.5 bits (72), Expect = 0.15
Identities = 9/36 (25%), Positives = 14/36 (38%)
Query: 897 TIERKFECDYCKMKFKSKSFLSEHINTHTGNKPYQC 932
+ E+ + C CK F + L +H HT
Sbjct: 6 SGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSS 41
Score = 30.4 bits (69), Expect = 0.40
Identities = 9/29 (31%), Positives = 13/29 (44%)
Query: 656 HTGIKEHQCHVCNTAFYHIRSLSRHLKIH 684
+G K + C C F L +H K+H
Sbjct: 5 SSGEKPYSCAECKETFSDNNRLVQHQKMH 33
Score = 30.0 bits (68), Expect = 0.51
Identities = 9/28 (32%), Positives = 13/28 (46%)
Query: 631 DKKYECDSCNKKFWSKRALSEHMIIHTG 658
+K Y C C + F L +H +HT
Sbjct: 8 EKPYSCAECKETFSDNNRLVQHQKMHTV 35
Score = 29.2 bits (66), Expect = 1.0
Identities = 11/25 (44%), Positives = 15/25 (60%)
Query: 862 HSSQKKYVCDMCGKQFTSNNRVSQH 886
S +K Y C C + F+ NNR+ QH
Sbjct: 5 SSGEKPYSCAECKETFSDNNRLVQH 29
Score = 29.2 bits (66), Expect = 1.1
Identities = 9/16 (56%), Positives = 11/16 (68%)
Query: 1378 HTGNKPYHCQICKESF 1393
+G KPY C CKE+F
Sbjct: 5 SSGEKPYSCAECKETF 20
Score = 28.8 bits (65), Expect = 1.6
Identities = 8/30 (26%), Positives = 11/30 (36%)
Query: 430 ECDYCKRKFTCKRYLAEHINAHTGNTIYGC 459
C CK F+ L +H HT +
Sbjct: 12 SCAECKETFSDNNRLVQHQKMHTVKSGPSS 41
Score = 28.1 bits (63), Expect = 3.0
Identities = 10/29 (34%), Positives = 14/29 (48%)
Query: 593 HSSIKRYMCDICGKQFTTLSYLDLHRKSH 621
S K Y C C + F+ + L H+K H
Sbjct: 5 SSGEKPYSCAECKETFSDNNRLVQHQKMH 33
Score = 27.3 bits (61), Expect = 4.3
Identities = 9/36 (25%), Positives = 14/36 (38%), Gaps = 1/36 (2%)
Query: 1352 TGNK-FECIYCKKKYRRKFDLKEHINKHTGNKPYHC 1386
+G K + C CK+ + L +H HT
Sbjct: 6 SGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSS 41
>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 44
Score = 46.8 bits (112), Expect = 7e-07
Identities = 9/39 (23%), Positives = 17/39 (43%)
Query: 1038 KCHTGERPYKCDVCGSSFKDKWYLGVHMRKHNGEKPYNC 1076
T + Y C+ CG +F ++L H + H + +
Sbjct: 5 SSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS 43
Score = 41.0 bits (97), Expect = 6e-05
Identities = 12/35 (34%), Positives = 14/35 (40%)
Query: 1062 GVHMRKHNGEKPYNCDYCGQTFAARSTFTFHLKKH 1096
G K YNC+ CG+ F T H K H
Sbjct: 1 GSSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIH 35
Score = 40.6 bits (96), Expect = 8e-05
Identities = 11/36 (30%), Positives = 17/36 (47%), Gaps = 4/36 (11%)
Query: 1528 EHINTHTGNKPYQCQICNKSFGTRRNYRLHLKRHKR 1563
++ T +K Y C C K+F HL RH++
Sbjct: 2 SSGSSGTDSKSYNCNECGKAF----TRIFHLTRHQK 33
Score = 38.7 bits (91), Expect = 4e-04
Identities = 12/43 (27%), Positives = 17/43 (39%), Gaps = 3/43 (6%)
Query: 1008 KHMLSHTGEKPFCCHICGK--SLKGNLKDHILKCHTGERPYKC 1048
S T K + C+ CGK + +L H K HT +
Sbjct: 2 SSGSSGTDSKSYNCNECGKAFTRIFHLTRH-QKIHTRKSGPSS 43
Score = 36.0 bits (84), Expect = 0.003
Identities = 13/34 (38%), Positives = 16/34 (47%)
Query: 651 EHMIIHTGIKEHQCHVCNTAFYHIRSLSRHLKIH 684
T K + C+ C AF I L+RH KIH
Sbjct: 2 SSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIH 35
Score = 34.5 bits (80), Expect = 0.015
Identities = 8/27 (29%), Positives = 13/27 (48%)
Query: 1998 GERPYKCDVCGSSFKDKKHFSVHIRNH 2024
+ Y C+ CG +F H + H + H
Sbjct: 9 DSKSYNCNECGKAFTRIFHLTRHQKIH 35
Score = 34.5 bits (80), Expect = 0.016
Identities = 10/36 (27%), Positives = 18/36 (50%), Gaps = 4/36 (11%)
Query: 919 EHINTHTGNKPYQCQICKKSFANKRSYQRDLKRHKQ 954
++ T +K Y C C K+F + + L RH++
Sbjct: 2 SSGSSGTDSKSYNCNECGKAF-TRIFH---LTRHQK 33
Score = 32.6 bits (75), Expect = 0.078
Identities = 10/43 (23%), Positives = 15/43 (34%), Gaps = 6/43 (13%)
Query: 1966 HMLSHTGEKPFCCDICGKSLKGNLKAHILRCQ----GERPYKC 2004
S T K + C+ CGK+ H+ R Q +
Sbjct: 3 SGSSGTDSKSYNCNECGKAF--TRIFHLTRHQKIHTRKSGPSS 43
Score = 30.2 bits (69), Expect = 0.49
Identities = 11/27 (40%), Positives = 13/27 (48%)
Query: 632 KKYECDSCNKKFWSKRALSEHMIIHTG 658
K Y C+ C K F L+ H IHT
Sbjct: 11 KSYNCNECGKAFTRIFHLTRHQKIHTR 37
Score = 29.5 bits (67), Expect = 0.93
Identities = 11/38 (28%), Positives = 14/38 (36%)
Query: 1504 IKTIQRKFECDFCKKKFYRNFDLQEHINTHTGNKPYQC 1541
T + + C+ C K F R F L H HT
Sbjct: 6 SGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS 43
Score = 28.7 bits (65), Expect = 1.8
Identities = 8/38 (21%), Positives = 12/38 (31%)
Query: 895 IKTIERKFECDYCKMKFKSKSFLSEHINTHTGNKPYQC 932
T + + C+ C F L+ H HT
Sbjct: 6 SGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS 43
Score = 27.5 bits (62), Expect = 3.6
Identities = 10/34 (29%), Positives = 15/34 (44%), Gaps = 4/34 (11%)
Query: 1373 EHINKHTGNKPYHCQICKESFYTLKTYRGDLKRH 1406
+ T +K Y+C C ++F T L RH
Sbjct: 2 SSGSSGTDSKSYNCNECGKAF----TRIFHLTRH 31
Score = 27.5 bits (62), Expect = 3.8
Identities = 12/30 (40%), Positives = 17/30 (56%)
Query: 592 VHSSIKRYMCDICGKQFTTLSYLDLHRKSH 621
+ K Y C+ CGK FT + +L H+K H
Sbjct: 6 SGTDSKSYNCNECGKAFTRIFHLTRHQKIH 35
Score = 27.5 bits (62), Expect = 4.0
Identities = 9/38 (23%), Positives = 14/38 (36%), Gaps = 6/38 (15%)
Query: 381 AKHMRVHLRSVHNGKERKFICDICGKQFTSNIHASRHK 418
+ + C+ CGK FT H +RH+
Sbjct: 1 GSSGSSGTD------SKSYNCNECGKAFTRIFHLTRHQ 32
Score = 27.5 bits (62), Expect = 4.8
Identities = 9/32 (28%), Positives = 15/32 (46%), Gaps = 1/32 (3%)
Query: 856 KHLREVHSSQKKYVCDMCGKQFTSNNRVSQHK 887
+ K Y C+ CGK FT +++H+
Sbjct: 2 SSGS-SGTDSKSYNCNECGKAFTRIFHLTRHQ 32
Score = 27.2 bits (61), Expect = 5.2
Identities = 11/36 (30%), Positives = 14/36 (38%), Gaps = 1/36 (2%)
Query: 1352 TGNK-FECIYCKKKYRRKFDLKEHINKHTGNKPYHC 1386
T +K + C C K + R F L H HT
Sbjct: 8 TDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS 43
Score = 27.2 bits (61), Expect = 6.7
Identities = 9/31 (29%), Positives = 12/31 (38%)
Query: 445 AEHINAHTGNTIYGCRICKKTFLYTNGLRRH 475
++ T + Y C C K F L RH
Sbjct: 1 GSSGSSGTDSKSYNCNECGKAFTRIFHLTRH 31
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 52.0 bits (124), Expect = 3e-06
Identities = 91/616 (14%), Positives = 164/616 (26%), Gaps = 225/616 (36%)
Query: 1384 YHCQICKESFYTLKTYRGDLKRHEQLAEQSDEMHSTSKFQNKIKKPLDTGD--------- 1434
+ +E F K + E + KF + ++
Sbjct: 28 FIASQLQEQF--NKILPEPTEGFAADDEPTTPAELVGKFLGYVSSLVEPSKVGQFDQVLN 85
Query: 1435 LSWEEWNELVLSGTKKCPVCHK-TYSTPRQMRIHLREAHSQ-KKY--ACDVCGKQFTSTN 1490
L E+ L G + H ++ L + K Y A + + F +
Sbjct: 86 LCLTEFENCYLEGN---DI-HALAAKLLQENDTTLVKTKELIKNYITARIMAKRPFDKKS 141
Query: 1491 R------VSQHKAHSH--FG-------------------------IIKTIQRKFE----- 1512
V + A FG +IK
Sbjct: 142 NSALFRAVGEGNAQLVAIFGGQGNTDDYFEELRDLYQTYHVLVGDLIKFSAETLSELIRT 201
Query: 1513 CDFCKKKFYRNFDLQEHINTHTGNKP---YQC------------QICNKSFGTRRNYRLH 1557
+K F + ++ E + + N P Y Q+ + Y +
Sbjct: 202 TLDAEKVFTQGLNILEWL-ENPSNTPDKDYLLSIPISCPLIGVIQLAH--------YVVT 252
Query: 1558 LKRHKRSAGQLKPEDIHECKICHK-------I--------FLENSRLTRHMNFTHGDKCH 1602
K + G+L+ + + I F + R + F G +C+
Sbjct: 253 AKLLGFTPGELRSY-LKGATGHSQGLVTAVAIAETDSWESFFVSVRKAITVLFFIGVRCY 311
Query: 1603 GATNSTDKIFRDADSIVHPNSTVWAKRLITELKEDEYS-----SLKRAISKGSFKCGICG 1657
A PN+++ L L+ +E S+ +++ + +
Sbjct: 312 EAY---------------PNTSLPPSILEDSLENNEGVPSPMLSI-SNLTQEQVQDYV-- 353
Query: 1658 KCYKTREKCRRHI---KRIHLNSRNEPSNMGDYSLEEWNKNKHEVIESQEPMDTGDY-SL 1713
K H+ K++ ++ N N+ V+ +G SL
Sbjct: 354 ------NKTNSHLPAGKQVEISLVNGAKNL--------------VV-------SGPPQSL 386
Query: 1714 EQWNEMVASKSKECPVCHKTSMESSSSDINKQTFPKTSKTSTSENENHKPSCGNSFMVHK 1773
N + K+K P S D ++ F + K N F+
Sbjct: 387 YGLNLTLR-KAK-AP---------SGLDQSRIPFSE-----------RKLKFSNRFL--- 421
Query: 1774 NQPIDTGDF-S--LEQWRQLVAE--KTKLCPVCNKEYATPV--TMR-KHLREVHVSKKKF 1825
P+ F S L L+ + K+ PV T LR + S +
Sbjct: 422 --PV-ASPFHSHLLVPASDLINKDLVKNNVSFNAKDIQIPVYDTFDGSDLRVLSGSISER 478
Query: 1826 KCD-LCQK--------QFKASRSLQCHKQFVHLGVHKPKFLNMECDYCSRKFPSKN---- 1872
D + + QFKA+ H + G P
Sbjct: 479 IVDCIIRLPVKWETTTQFKAT-----H--ILDFG------------------PGGASGLG 513
Query: 1873 EVTNHIKSHMGVRDIL 1888
+T+ K GVR I+
Sbjct: 514 VLTHRNKDGTGVRVIV 529
Score = 51.6 bits (123), Expect = 3e-06
Identities = 90/548 (16%), Positives = 167/548 (30%), Gaps = 205/548 (37%)
Query: 1083 FAA---RSTFTFHLKKHEENGSVDFDE---IVE--SRTVGVIGYLNLSYSIVIQNGGDGS 1134
F A + F L + E + D DE E + +GY+ S +++ G
Sbjct: 28 FIASQLQEQFNKILPEPTEGFAAD-DEPTTPAELVGK---FLGYV----SSLVEPSKVGQ 79
Query: 1135 KSCLLRCA-----NRIVRERDRVVCARASPWVPKDE--LTTSRKILST-----------E 1176
+L N + D + A A+ + +++ L +++++
Sbjct: 80 FDQVLNLCLTEFENCYLEGND--IHALAAKLLQENDTTLVKTKELIKNYITARIMAKRPF 137
Query: 1177 LQEEQSSLER---------------Q-NDEDSFKCDIRGKCLKTQEKYNILNVQIYLNPN 1220
++ S+L R Q N +D F+ ++R + Y++L V + +
Sbjct: 138 DKKSNSALFRAVGEGNAQLVAIFGGQGNTDDYFE-ELR----DLYQTYHVL-VGDLIKFS 191
Query: 1221 SK--SELSSHGLTTSKNLDKYIDILNSNQESLDLDTSDYSLEENEEWNKITYEVETNEPM 1278
++ SEL L K + ++IL EW P
Sbjct: 192 AETLSELIRTTLDAEKVFTQGLNIL--------------------EW--------LENPS 223
Query: 1279 DTGDYTLEEYNKIVASGSKDCP------------VCHKTYSTPKTMRRHLRQVHTSQKRY 1326
+T D ++Y + S CP TP +R +L+
Sbjct: 224 NTPD---KDY---LLSIPISCPLIGVIQLAHYVVTAKLLGFTPGELRSYLK--------- 268
Query: 1327 LCDICGKQFTSTNRVNIHKACV--HSSTGNKFECIYCKKKYRRKFDLKEHINKHTGNKPY 1384
G + + + A + + F +K F I G
Sbjct: 269 -----G---ATGHSQGLVTAVAIAETDSWESFFVSV-RKAITVLF----FI----G---V 308
Query: 1385 HCQICKESF-----------YTLKTYRG---------DLKRHEQLAEQSDEMHSTSKFQN 1424
C E++ +L+ G +L + EQ+ + ++ +S
Sbjct: 309 RCY---EAYPNTSLPPSILEDSLENNEGVPSPMLSISNLTQ-EQVQDYVNKTNSHLPAGK 364
Query: 1425 KIKKPLDTGDLSWEEWNELVLSG-------------TKKCPVCHKTYSTPRQMRIHLREA 1471
+++ L G LV+SG K P S Q RI
Sbjct: 365 QVEISLVNGA------KNLVVSGPPQSLYGLNLTLRKAKAP------SGLDQSRIP---- 408
Query: 1472 HSQKKYACDVCGKQFTSTNRVSQHKA--HSHFGIIKTIQRKFECDFCKKKF-YRNFDLQE 1528
S++K +F V+ + HSH + D K + D+Q
Sbjct: 409 FSERKL---KFSNRF---LPVA---SPFHSHL--LVPASDLINKDLVKNNVSFNAKDIQI 457
Query: 1529 HI-NTHTG 1535
+ +T G
Sbjct: 458 PVYDTFDG 465
Score = 51.2 bits (122), Expect = 4e-06
Identities = 83/544 (15%), Positives = 137/544 (25%), Gaps = 244/544 (44%)
Query: 294 SFLTPHKLKTHIKTKHRTQLKELYTF--------ECQHCEDKFSTPFELNKHNESKHEKG 345
L P +QL+E F E +D+ +TP EL G
Sbjct: 19 VLLVPTAS--FF---IASQLQE--QFNKILPEPTEGFAADDEPTTPAEL---------VG 62
Query: 346 RKLNPETGGYTYEEYKEVVVSKSKQCPLCTKIFTTAKHMRVHLRSVHNGKERKFICDICG 405
+ L GY + V + Q L E ++
Sbjct: 63 KFL-----GYVSSLVEPSKVGQFDQV----------------LNLCLTEFENCYLEG--- 98
Query: 406 KQFTSNIHASRHKNYAHSRDRQKMECDYCKRKFTCKRY------------------LAEH 447
++IHA A Q+ + K K K Y L
Sbjct: 99 ----NDIHA-----LAAKLL-QENDTTLVKTKELIKNYITARIMAKRPFDKKSNSALFRA 148
Query: 448 INAHT----------GNT------------IYGCRI------------------CKKTFL 467
+ GNT Y + +
Sbjct: 149 VGEGNAQLVAIFGGQGNTDDYFEELRDLYQTYHVLVGDLIKFSAETLSELIRTTLDAEKV 208
Query: 468 YTNGLRRHILS--RHKDT--DVVILNEVKDIFP----SHLQSYQIKCRYCARTFSTQNDL 519
+T GL +IL + D L + P L Y + + T +L
Sbjct: 209 FTQGL--NILEWLENPSNTPDKDYLLSIPISCPLIGVIQLAHYVVTAKLLGFTPG---EL 263
Query: 520 KEHVS--SVH-----------MFMT-ESFEN--------------------PN---EPRV 542
+ ++ + H + ESF PN P +
Sbjct: 264 RSYLKGATGHSQGLVTAVAIAETDSWESFFVSVRKAITVLFFIGVRCYEAYPNTSLPPSI 323
Query: 543 L-----NSNRYP---LAIDGGLSLEEYQQIVATKSKQCPICEKIFAA----PKQMRMHLR 590
L N+ P L+I L+ E+ Q V + P +++ + K +
Sbjct: 324 LEDSLENNEGVPSPMLSISN-LTQEQVQDYVNKTNSHLPAGKQVEISLVNGAKNL----- 377
Query: 591 HVHSSIKRYMCDICGKQFTTLSYLDLH-RKSHNETVKRKEEDKKYECDSCNKKFWSKRAL 649
V + G +L L+L RK+ + D F S+R L
Sbjct: 378 -V----------VSGPP-QSLYGLNLTLRKAKAPS----------GLDQSRIPF-SERKL 414
Query: 650 SEHM----IIHTGIKEHQCHVCNTAFYHIRSLSRHLK-----IHE--------YNESKMY 692
+ + +H S L I++ +N +
Sbjct: 415 KFSNRFLPV--------------ASPFH----SHLLVPASDLINKDLVKNNVSFNAKDI- 455
Query: 693 KCPV 696
+ PV
Sbjct: 456 QIPV 459
Score = 44.7 bits (105), Expect = 4e-04
Identities = 45/277 (16%), Positives = 86/277 (31%), Gaps = 88/277 (31%)
Query: 1053 SSFKDKWYLG-VHMRKHNG--------EKP-----YNCDYCGQTFAARSTFTFHLKKHEE 1098
+ +D W H + G P + G+ R ++ + +
Sbjct: 1640 KAAQDVWNRADNHFKDTYGFSILDIVINNPVNLTIHFGGEKGK--RIRENYSAMIFETIV 1697
Query: 1099 NGSVD----FDEIVESRTV----GVIGYLNL-----------SYSI--VIQNGGDGSKSC 1137
+G + F EI E T G L+ + +++ G
Sbjct: 1698 DGKLKTEKIFKEINEHSTSYTFRSEKGLLSATQFTQPALTLMEKAAFEDLKSKGLIPADA 1757
Query: 1138 ------------LLRCAN--------RIVRERDRVVCARASPWVPKDELTTSR-KILSTE 1176
L A+ +V R + A VP+DEL S +++
Sbjct: 1758 TFAGHSLGEYAALASLADVMSIESLVEVVFYRGMTM-QVA---VPRDELGRSNYGMIAIN 1813
Query: 1177 LQEEQSSLERQNDEDSFKCDIRGKCLKTQEK-----YNILNVQIYLNPNSKSELSSHGLT 1231
+S +++ + + +T YN+ N Q +++ G
Sbjct: 1814 PGRVAASF----SQEALQYVVERVGKRTGWLVEIVNYNVENQQY---------VAA-G-- 1857
Query: 1232 TSKNLDKYIDILNSNQ----ESLDLDTSDYSLEENEE 1264
+ LD ++LN + + ++L S SLEE E
Sbjct: 1858 DLRALDTVTNVLNFIKLQKIDIIELQKS-LSLEEVEG 1893
Score = 43.9 bits (103), Expect = 8e-04
Identities = 60/359 (16%), Positives = 103/359 (28%), Gaps = 150/359 (41%)
Query: 1161 VPKDELTTSRKILSTELQEE-QSSLERQNDEDSFKCDIRGKCLKTQEKYNILNVQIYLNP 1219
VP T+ ++++LQE+ L + F D E P
Sbjct: 22 VP-----TASFFIASQLQEQFNKIL--PEPTEGFAAD--------DE------------P 54
Query: 1220 NSKSELSSH--GLTTSK----NLDKYIDILNSNQESLDLDTSDYSLEENEEWNKI-TYEV 1272
+ +EL G +S + ++ +L L + Y LE N+ I
Sbjct: 55 TTPAELVGKFLGYVSSLVEPSKVGQFDQVL---NLCLTEFENCY-LEGND----IHALAA 106
Query: 1273 ETNEPMDTGDYTLEEYNKIVASGSKDCPVCHKTY------STPKTMRRH----LRQVHTS 1322
+ + DT TL + +++ K Y + ++ R V
Sbjct: 107 KLLQENDT---TLVKTKELI-----------KNYITARIMAKRPFDKKSNSALFRAVGEG 152
Query: 1323 QKRYLCDICGKQFTSTNRVNIHKACVHSSTGNKFECIYCKKKYRRKFD-LKEHINKHTGN 1381
+ L I G Q GN + F+ L++
Sbjct: 153 NAQ-LVAIFGGQ------------------GNTDDY----------FEELRD-------- 175
Query: 1382 KPYHCQICKESFYTLKTYRGDLKR-----HEQLAEQSDEMHSTSKFQNK-------IKKP 1429
Y +TY + E L+E K + ++ P
Sbjct: 176 -----------LY--QTYHVLVGDLIKFSAETLSELIRTTLDAEKVFTQGLNILEWLENP 222
Query: 1430 LDTGDLSWEEWNELVLSGTKKCP------------VCHKTYSTPRQMRIHLREA--HSQ 1474
+T D + +LS CP TP ++R +L+ A HSQ
Sbjct: 223 SNTPDKDY------LLSIPISCPLIGVIQLAHYVVTAKLLGFTPGELRSYLKGATGHSQ 275
Score = 39.6 bits (92), Expect = 0.015
Identities = 23/110 (20%), Positives = 37/110 (33%), Gaps = 38/110 (34%)
Query: 487 ILNEVKDIFPSHLQSY-------QIKCRYCARTFSTQNDLKEHVSSVHMFMTES-----F 534
IL+ V + P +L + +I+ Y A F T D K + + E F
Sbjct: 1661 ILDIVIN-NPVNLTIHFGGEKGKRIRENYSAMIFETIVDGKLKTEKIFKEINEHSTSYTF 1719
Query: 535 ENPNEPRVLNSNRY--P------LAI------DG---------GLSLEEY 561
+ +L++ ++ P A G G SL EY
Sbjct: 1720 RSEKG--LLSATQFTQPALTLMEKAAFEDLKSKGLIPADATFAGHSLGEY 1767
Score = 38.9 bits (90), Expect = 0.024
Identities = 83/573 (14%), Positives = 152/573 (26%), Gaps = 224/573 (39%)
Query: 472 LRRHILSRHKDTDVVIL---------NEVKDIFPSHLQSYQIKCRYCARTFSTQNDLKEH 522
R LS H + V+L +++++ F L T D E
Sbjct: 6 TRPLTLS-HGSLEHVLLVPTASFFIASQLQEQFNKILP---------EPTEGFAAD-DEP 54
Query: 523 VSSVHM---FM--TESFENPNEP----RVLNSNRYPLAIDGGLSLEEYQQ---------- 563
+ + F+ S P++ +VLN L L E++
Sbjct: 55 TTPAELVGKFLGYVSSLVEPSKVGQFDQVLN-----------LCLTEFENCYLEGNDIHA 103
Query: 564 IVA--------TKSKQCPICEKIFAAPKQMRMHLRHVHSS----------IKRYMCDICG 605
+ A T K + + A + +S + I G
Sbjct: 104 LAAKLLQENDTTLVKTKELIKNYITARIMAKRPFDKKSNSALFRAVGEGNAQLVA--IFG 161
Query: 606 KQFTTLSYLD----LHRKSH--------------NETVKRKEEDKKYECDSCNKKFW--- 644
Q T Y + L++ H +E ++ + +K N W
Sbjct: 162 GQGNTDDYFEELRDLYQTYHVLVGDLIKFSAETLSELIRTTLDAEKVFTQGLNILEWLEN 221
Query: 645 -SKRALSEHM--------IIHTGIKEHQ-CHVCNTA----------FYHIRSLSRHLK-- 682
S +++ +I G+ Q H TA +++ + H +
Sbjct: 222 PSNTPDKDYLLSIPISCPLI--GVI--QLAHYVVTAKLLGFTPGELRSYLKGATGHSQGL 277
Query: 683 --------------IHEYNESKMYK--------C----PVCSKMFTELYEMKRHRDHKHG 716
+ K C P S ++ ++ G
Sbjct: 278 VTAVAIAETDSWESFFV-SVRKAITVLFFIGVRCYEAYPNTS---LPPSILEDSLENNEG 333
Query: 717 GKCHVCKICGATIKLFTELEEKEDSSFERKKSKDSFHCDTCGKYFRSRQICNKHI---KR 773
+ I T + ++++ + + N H+ K+
Sbjct: 334 VPSPMLSISNLTQE---QVQD---------------YVNKT----------NSHLPAGKQ 365
Query: 774 VHL---NPTKTFKC-----DLCSDRFSTS---AKLKKHVD--KIHFT---PEFQ------ 811
V + N K L + + AK +D +I F+ +F
Sbjct: 366 VEISLVNGAKNLVVSGPPQSLY--GLNLTLRKAKAPSGLDQSRIPFSERKLKFSNRFLPV 423
Query: 812 -EP--SKKNEP-LDTGDYTLEQWNELVTAQSKDCPVCHKTYSTPKSMRKHLREVHSSQKK 867
P S P D + L + N A+ PV Y T LR + S +
Sbjct: 424 ASPFHSHLLVPASDLINKDLVKNNVSFNAKDIQIPV----YDTFDG--SDLRVLSGSISE 477
Query: 868 YVCDMCGKQFTSNNRV----SQHKAYSH---FG 893
+ D V + +H FG
Sbjct: 478 RIVDC---IIRL--PVKWETTTQFKATHILDFG 505
Score = 37.0 bits (85), Expect = 0.088
Identities = 49/288 (17%), Positives = 80/288 (27%), Gaps = 95/288 (32%)
Query: 644 WSKRALSEHMIIHTGIKEHQCHVCNTAFYHIRSL-SRHLKIH-----EYNESKMYKCPVC 697
+S R L + G EH V +F+ L + KI + P
Sbjct: 4 YSTRPL----TLSHGSLEHVLLVPTASFFIASQLQEQFNKILPEPTEGFAADDEPTTPA- 58
Query: 698 SKMFTEL------YEMKRHRDHKHGGKCHVCKIC----------GATIKLFT-ELEEKED 740
EL Y K G V +C G I +L ++ D
Sbjct: 59 -----ELVGKFLGYVSSLVEPSKVGQFDQVLNLCLTEFENCYLEGNDIHALAAKLLQEND 113
Query: 741 SSFERKKSKDSFHCDTCGKYFRSRQICNKHIKRVH---L-------------------NP 778
++ + K + Y +R + + + L N
Sbjct: 114 TTLVKTK-------ELIKNYITARIMAKRPFDKKSNSALFRAVGEGNAQLVAIFGGQGNT 166
Query: 779 TKTFKCDLCSDRFSTSAKLKKHVDKIHFT----PEFQEPSKKNEPLDTGDYTLEQWNE-- 832
F+ +L D + T L D I F+ E + E + T + +W E
Sbjct: 167 DDYFE-EL-RDLYQTYHVLVG--DLIKFSAETLSELIRTTLDAEKVFTQGLNILEWLENP 222
Query: 833 --------LVTAQ-SKDCP------------VCHKTYSTPKSMRKHLR 859
L++ S CP TP +R +L+
Sbjct: 223 SNTPDKDYLLSIPIS--CPLIGVIQLAHYVVTAKLLGFTPGELRSYLK 268
Score = 33.1 bits (75), Expect = 1.3
Identities = 35/176 (19%), Positives = 50/176 (28%), Gaps = 57/176 (32%)
Query: 1493 SQHK-----AHSHFGIIKTIQRKFE-CDFCKKKFYRNFDLQEHINTHTGNKPYQCQICN- 1545
SQ + + + + + D K Y F + + + N P I
Sbjct: 1626 SQEQGMGMDLYKTSKAAQDV---WNRADNHFKDTY-GFSILDIVI----NNPVNLTIHFG 1677
Query: 1546 --KSFGTRRNYRLHLKRHKRSAGQLKPEDIHECKICHKIFLE-NSRLTRHMNFTH-GDKC 1601
K R NY + G+LK E KIF E N T + F
Sbjct: 1678 GEKGKRIRENY-SAMIFETIVDGKLKTE---------KIFKEINEHSTSYT-FRSEKGLL 1726
Query: 1602 HGATNSTDKIFRDADSIVHPNSTVWAKRLITELKED---------------EYSSL 1642
AT T P T+ K +LK EY++L
Sbjct: 1727 S-ATQFT-----------QPALTLMEKAAFEDLKSKGLIPADATFAGHSLGEYAAL 1770
>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens}
Length = 44
Score = 43.3 bits (102), Expect = 1e-05
Identities = 12/34 (35%), Positives = 15/34 (44%)
Query: 1040 HTGERPYKCDVCGSSFKDKWYLGVHMRKHNGEKP 1073
GE P+KC C F + YL H R H +
Sbjct: 7 GAGENPFKCSKCDRVFTQRNYLVQHERTHARKSG 40
Score = 37.5 bits (87), Expect = 0.001
Identities = 10/35 (28%), Positives = 14/35 (40%)
Query: 1062 GVHMRKHNGEKPYNCDYCGQTFAARSTFTFHLKKH 1096
G GE P+ C C + F R+ H + H
Sbjct: 1 GSSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTH 35
Score = 35.6 bits (82), Expect = 0.006
Identities = 10/39 (25%), Positives = 18/39 (46%)
Query: 1529 HINTHTGNKPYQCQICNKSFGTRRNYRLHLKRHKRSAGQ 1567
++ G P++C C++ F R H + H R +G
Sbjct: 3 SGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSGP 41
Score = 34.8 bits (80), Expect = 0.012
Identities = 10/27 (37%), Positives = 13/27 (48%)
Query: 1998 GERPYKCDVCGSSFKDKKHFSVHIRNH 2024
GE P+KC C F + + H R H
Sbjct: 9 GENPFKCSKCDRVFTQRNYLVQHERTH 35
Score = 31.4 bits (71), Expect = 0.19
Identities = 6/33 (18%), Positives = 14/33 (42%)
Query: 920 HINTHTGNKPYQCQICKKSFANKRSYQRDLKRH 952
++ G P++C C + F + + + H
Sbjct: 3 SGSSGAGENPFKCSKCDRVFTQRNYLVQHERTH 35
Score = 30.6 bits (69), Expect = 0.33
Identities = 9/31 (29%), Positives = 14/31 (45%)
Query: 899 ERKFECDYCKMKFKSKSFLSEHINTHTGNKP 929
E F+C C F +++L +H TH
Sbjct: 10 ENPFKCSKCDRVFTQRNYLVQHERTHARKSG 40
Score = 30.2 bits (68), Expect = 0.51
Identities = 8/29 (27%), Positives = 14/29 (48%)
Query: 593 HSSIKRYMCDICGKQFTTLSYLDLHRKSH 621
+ + C C + FT +YL H ++H
Sbjct: 7 GAGENPFKCSKCDRVFTQRNYLVQHERTH 35
Score = 29.8 bits (67), Expect = 0.72
Identities = 6/32 (18%), Positives = 13/32 (40%)
Query: 631 DKKYECDSCNKKFWSKRALSEHMIIHTGIKEH 662
+ ++C C++ F + L +H H
Sbjct: 10 ENPFKCSKCDRVFTQRNYLVQHERTHARKSGP 41
Score = 27.9 bits (62), Expect = 3.0
Identities = 7/33 (21%), Positives = 11/33 (33%)
Query: 652 HMIIHTGIKEHQCHVCNTAFYHIRSLSRHLKIH 684
G +C C+ F L +H + H
Sbjct: 3 SGSSGAGENPFKCSKCDRVFTQRNYLVQHERTH 35
Score = 27.5 bits (61), Expect = 4.6
Identities = 7/26 (26%), Positives = 13/26 (50%)
Query: 862 HSSQKKYVCDMCGKQFTSNNRVSQHK 887
+ + + C C + FT N + QH+
Sbjct: 7 GAGENPFKCSKCDRVFTQRNYLVQHE 32
Score = 27.1 bits (60), Expect = 6.7
Identities = 9/24 (37%), Positives = 12/24 (50%)
Query: 430 ECDYCKRKFTCKRYLAEHINAHTG 453
+C C R FT + YL +H H
Sbjct: 14 KCSKCDRVFTQRNYLVQHERTHAR 37
Score = 26.7 bits (59), Expect = 8.3
Identities = 8/28 (28%), Positives = 12/28 (42%)
Query: 1511 FECDFCKKKFYRNFDLQEHINTHTGNKP 1538
F+C C + F + L +H TH
Sbjct: 13 FKCSKCDRVFTQRNYLVQHERTHARKSG 40
>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid
binding, KIAA1227 protein, structural genomics; NMR
{Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Length = 107
Score = 45.3 bits (106), Expect = 1e-05
Identities = 18/85 (21%), Positives = 31/85 (36%), Gaps = 5/85 (5%)
Query: 396 ERKFICDICGKQFTSNIHASRHKNYAHSRDRQKMECDYCKRKFTCKRYLAEHINAHTGNT 455
+ + C +C + +S + H+ R C YC +F EH +
Sbjct: 14 KEVYQCRLCNAKLSSLLEQGSHERLC----RNAAVCPYCSLRFFSPELKQEH-ESKCEYK 68
Query: 456 IYGCRICKKTFLYTNGLRRHILSRH 480
C C +TF + + RH + H
Sbjct: 69 KLTCLECMRTFKSSFSIWRHQVEVH 93
Score = 44.9 bits (105), Expect = 1e-05
Identities = 20/87 (22%), Positives = 32/87 (36%), Gaps = 10/87 (11%)
Query: 1860 ECDYCSRKFPSKNEVTNHIKSHMGVRDILCPICKKGFIALKHMKTHLKKHMWKAGEIPLE 1919
+C C+ K S E +H + +CP C F + + + H K +K
Sbjct: 18 QCRLCNAKLSSLLEQGSHERLCR--NAAVCPYCSLRFFSPELKQEHESKCEYK------- 68
Query: 1920 DTYLCDLCSKVFLEHKDMIRHREWVHG 1946
C C + F + RH+ VH
Sbjct: 69 -KLTCLECMRTFKSSFSIWRHQVEVHN 94
Score = 43.0 bits (100), Expect = 7e-05
Identities = 21/94 (22%), Positives = 30/94 (31%), Gaps = 5/94 (5%)
Query: 623 ETVKRKEEDKKYECDSCNKKFWSKRALSEHMIIHTGIKEHQCHVCNTAFYHIRSLSRHLK 682
E + Y+C CN K S H + C C+ F+ H
Sbjct: 6 SGASPVENKEVYQCRLCNAKLSSLLEQGSHERLCR--NAAVCPYCSLRFFSPELKQEHES 63
Query: 683 IHEYNESKMYKCPVCSKMFTELYEMKRHRDHKHG 716
EY K C C + F + + RH+ H
Sbjct: 64 KCEY---KKLTCLECMRTFKSSFSIWRHQVEVHN 94
Score = 42.2 bits (98), Expect = 1e-04
Identities = 18/84 (21%), Positives = 31/84 (36%), Gaps = 9/84 (10%)
Query: 864 SQKKYVCDMCGKQFTSNNRVSQHKAYSHFGIIKTIERKFECDYCKMKFKSKSFLSEHINT 923
+++ Y C +C + +S H+ C YC ++F S EH +
Sbjct: 13 NKEVYQCRLCNAKLSSLLEQGSHERLCR--------NAAVCPYCSLRFFSPELKQEH-ES 63
Query: 924 HTGNKPYQCQICKKSFANKRSYQR 947
K C C ++F + S R
Sbjct: 64 KCEYKKLTCLECMRTFKSSFSIWR 87
Score = 41.0 bits (95), Expect = 3e-04
Identities = 21/103 (20%), Positives = 38/103 (36%), Gaps = 9/103 (8%)
Query: 1322 SQKRYLCDICGKQFTSTNRVNIHKACVHSSTGNKFECIYCKKKYRRKFDLKEHINKHTGN 1381
+++ Y C +C + +S H+ N C YC ++ +EH +K
Sbjct: 13 NKEVYQCRLCNAKLSSLLEQGSHERLCR----NAAVCPYCSLRFFSPELKQEHESKCEYK 68
Query: 1382 KPYHCQICKESFYTLKTYRGDLKRHEQLAEQSDEMHSTSKFQN 1424
K C C +F + + RH+ + M TS +
Sbjct: 69 K-LTCLECMRTFKSSF----SIWRHQVEVHNQNNMAPTSGPSS 106
Score = 41.0 bits (95), Expect = 4e-04
Identities = 17/98 (17%), Positives = 34/98 (34%), Gaps = 13/98 (13%)
Query: 1467 HLREAHSQKKYACDVCGKQFTSTNRVSQHKAHSHFGIIKTIQRKFECDFCKKKFYRNFDL 1526
+++ Y C +C + +S H+ + + C +C +F+
Sbjct: 7 GASPVENKEVYQCRLCNAKLSSLLEQGSHE--------RLCRNAAVCPYCSLRFFSPELK 58
Query: 1527 QEHINTHTGNKPYQCQICNKSFGTRRNYRLHLKRHKRS 1564
QEH + K C C ++F + RH+
Sbjct: 59 QEH-ESKCEYKKLTCLECMRTF----KSSFSIWRHQVE 91
Score = 41.0 bits (95), Expect = 4e-04
Identities = 18/99 (18%), Positives = 31/99 (31%), Gaps = 11/99 (11%)
Query: 554 GGLSLEEYQQIVATKSKQCPICEKIFAAPKQMRMHLRHVHSSIKRYMCDICGKQFTTLSY 613
G + + QC +C ++ + H R + +C C +F +
Sbjct: 1 GSSGSSGASPVENKEVYQCRLCNAKLSSLLEQGSHERLCRN---AAVCPYCSLRFFSPEL 57
Query: 614 LDLHRKSHNETVKRKEEDKKYECDSCNKKFWSKRALSEH 652
H E KK C C + F S ++ H
Sbjct: 58 KQEHESKC--------EYKKLTCLECMRTFKSSFSIWRH 88
Score = 40.3 bits (93), Expect = 7e-04
Identities = 15/76 (19%), Positives = 27/76 (35%), Gaps = 6/76 (7%)
Query: 1299 CPVCHKTYSTPKTMRRHLRQVHTSQKRYLCDICGKQFTSTNRVNIHKACVHSSTGNKFEC 1358
C +C+ S+ H R +C C +F S H++ K C
Sbjct: 19 CRLCNAKLSSLLEQGSHERLCRN---AAVCPYCSLRFFSPELKQEHES---KCEYKKLTC 72
Query: 1359 IYCKKKYRRKFDLKEH 1374
+ C + ++ F + H
Sbjct: 73 LECMRTFKSSFSIWRH 88
Score = 39.9 bits (92), Expect = 8e-04
Identities = 19/108 (17%), Positives = 35/108 (32%), Gaps = 27/108 (25%)
Query: 318 TFECQHCEDKFSTPFELNKHNESKHEKGRKLNPETGGYTYEEYKEVVVSKSKQCPLCTKI 377
++C+ C K S+ E H CP C+
Sbjct: 16 VYQCRLCNAKLSSLLEQGSHERLCRNA------------------------AVCPYCSLR 51
Query: 378 FTTAKHMRVHLRSVHNGKERKFICDICGKQFTSNIHASRHKNYAHSRD 425
F + + + H + +K C C + F S+ RH+ H+++
Sbjct: 52 FFSPELKQEHESKC---EYKKLTCLECMRTFKSSFSIWRHQVEVHNQN 96
Score = 39.5 bits (91), Expect = 0.001
Identities = 19/80 (23%), Positives = 29/80 (36%), Gaps = 10/80 (12%)
Query: 841 CPVCHKTYSTPKSMRKHLREVHSSQKKYVCDMCGKQFTSNNRVSQHKAYSHFGIIKTIER 900
C +C+ S+ H R + VC C +F S +H++ K +
Sbjct: 19 CRLCNAKLSSLLEQGSHERLCRN---AAVCPYCSLRFFSPELKQEHES-------KCEYK 68
Query: 901 KFECDYCKMKFKSKSFLSEH 920
K C C FKS + H
Sbjct: 69 KLTCLECMRTFKSSFSIWRH 88
Score = 39.5 bits (91), Expect = 0.001
Identities = 17/88 (19%), Positives = 33/88 (37%), Gaps = 9/88 (10%)
Query: 1821 SKKKFKCDLCQKQFKASRSLQCHKQFVHLGVHKPKFLNMECDYCSRKFPSKNEVTNHIKS 1880
+K+ ++C LC + + H++ C YCS +F S H +S
Sbjct: 13 NKEVYQCRLCNAKLSSLLEQGSHERLCR--------NAAVCPYCSLRFFSPELKQEH-ES 63
Query: 1881 HMGVRDILCPICKKGFIALKHMKTHLKK 1908
+ + C C + F + + H +
Sbjct: 64 KCEYKKLTCLECMRTFKSSFSIWRHQVE 91
Score = 39.1 bits (90), Expect = 0.002
Identities = 16/80 (20%), Positives = 31/80 (38%), Gaps = 9/80 (11%)
Query: 1450 KCPVCHKTYSTPRQMRIHLREAHSQKKYACDVCGKQFTSTNRVSQHKAHSHFGIIKTIQR 1509
+C +C+ S+ + H R + C C +F S +H++ + +
Sbjct: 18 QCRLCNAKLSSLLEQGSHERLCRN--AAVCPYCSLRFFSPELKQEHESKCEY-------K 68
Query: 1510 KFECDFCKKKFYRNFDLQEH 1529
K C C + F +F + H
Sbjct: 69 KLTCLECMRTFKSSFSIWRH 88
Score = 39.1 bits (90), Expect = 0.002
Identities = 16/68 (23%), Positives = 21/68 (30%), Gaps = 5/68 (7%)
Query: 663 QCHVCNTAFYHIRSLSRHLKIHEYNESKMYKCPVCSKMFTELYEMKRHRDHKHGGKCHVC 722
QC +CN + H ++ CP CS F + H K C
Sbjct: 18 QCRLCNAKLSSLLEQGSHERLCRNA----AVCPYCSLRFFSPELKQEHESK-CEYKKLTC 72
Query: 723 KICGATIK 730
C T K
Sbjct: 73 LECMRTFK 80
Score = 38.7 bits (89), Expect = 0.002
Identities = 21/87 (24%), Positives = 34/87 (39%), Gaps = 9/87 (10%)
Query: 690 KMYKCPVCSKMFTELYEMKRH-RDHKHGGKCHVCKICGATIKLFTELEEKEDSSFERKKS 748
++Y+C +C+ + L E H R ++ C C F E K++ E K
Sbjct: 15 EVYQCRLCNAKLSSLLEQGSHERLCRNAAVCPYCS------LRFFSPELKQEH--ESKCE 66
Query: 749 KDSFHCDTCGKYFRSRQICNKHIKRVH 775
C C + F+S +H VH
Sbjct: 67 YKKLTCLECMRTFKSSFSIWRHQVEVH 93
Score = 38.3 bits (88), Expect = 0.003
Identities = 17/91 (18%), Positives = 26/91 (28%), Gaps = 10/91 (10%)
Query: 899 ERKFECDYCKMKFKSKSFLSEHINTHTGNKPYQCQICKKSFANKRSYQRDLKRHKQLAGQ 958
+ ++C C K S H C C F + Q + +
Sbjct: 14 KEVYQCRLCNAKLSSLLEQGSHERLC--RNAAVCPYCSLRFFSPELKQEHESKCE----- 66
Query: 959 LKPEDIHECKICHKTFLEKGSLAKHMNWVHG 989
C C +TF S+ +H VH
Sbjct: 67 ---YKKLTCLECMRTFKSSFSIWRHQVEVHN 94
Score = 38.3 bits (88), Expect = 0.003
Identities = 20/95 (21%), Positives = 30/95 (31%), Gaps = 7/95 (7%)
Query: 353 GGYTYEEYKEVVVSKSKQCPLCTKIFTTAKHMRVHLRSVHNGKERKFICDICGKQFTSNI 412
G V + QC LC ++ H R N +C C +F S
Sbjct: 1 GSSGSSGASPVENKEVYQCRLCNAKLSSLLEQGSHERLCRN----AAVCPYCSLRFFSPE 56
Query: 413 HASRHKNYAHSRDRQKMECDYCKRKFTCKRYLAEH 447
H+ + + K+ C C R F + H
Sbjct: 57 LKQEHE--SKCEYK-KLTCLECMRTFKSSFSIWRH 88
Score = 37.6 bits (86), Expect = 0.005
Identities = 18/114 (15%), Positives = 32/114 (28%), Gaps = 22/114 (19%)
Query: 414 ASRHKNYAHSRDRQKMECDYCKRKFTCKRYLAEHINAHTGNTIYGCRICKKTFLYTNGLR 473
+S + +++ +C C K + H + C C F +
Sbjct: 2 SSGSSGASPVENKEVYQCRLCNAKLSSLLEQGSHERLCRNAAV--CPYCSLRFFSPELKQ 59
Query: 474 RHILSRHKDTDVVILNEVKDIFPSHLQSYQIKCRYCARTFSTQNDLKEHVSSVH 527
H S + ++ C C RTF + + H VH
Sbjct: 60 EH--------------------ESKCEYKKLTCLECMRTFKSSFSIWRHQVEVH 93
Score = 37.6 bits (86), Expect = 0.006
Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Query: 1797 LCPVCNKEYATPVTMRKHLREVHVSKKKFKCDLCQKQFKASRSLQCHKQFVH 1848
+CP C+ + +P ++H E KK C C + FK+S S+ H+ VH
Sbjct: 44 VCPYCSLRFFSPELKQEH--ESKCEYKKLTCLECMRTFKSSFSIWRHQVEVH 93
Score = 37.2 bits (85), Expect = 0.008
Identities = 22/110 (20%), Positives = 40/110 (36%), Gaps = 30/110 (27%)
Query: 284 KMFKCDICVASFLTPHKLKTHIKTKHRTQLKELYTFECQHCEDKFSTPFELNKHNESKHE 343
++++C +C A + + +H + C +C +F +P +H ESK E
Sbjct: 15 EVYQCRLCNAKLSSLLEQGSHERLCRN-------AAVCPYCSLRFFSPELKQEH-ESKCE 66
Query: 344 KGRKLNPETGGYTYEEYKEVVVSKSKQCPLCTKIFTTAKHMRVHLRSVHN 393
+KL C C + F ++ + H VHN
Sbjct: 67 -YKKL---------------------TCLECMRTFKSSFSIWRHQVEVHN 94
Score = 37.2 bits (85), Expect = 0.008
Identities = 18/88 (20%), Positives = 27/88 (30%), Gaps = 7/88 (7%)
Query: 1015 GEKPFCCHICGKSL--KGNLKDHILKCHTGERPYKCDVCGSSFKDKWYLGVHMRKHNGEK 1072
++ + C +C L H C C C F H K K
Sbjct: 13 NKEVYQCRLCNAKLSSLLEQGSHERLCRNA---AVCPYCSLRFFSPELKQEHESKCE-YK 68
Query: 1073 PYNCDYCGQTFAARSTFTFHLKK-HEEN 1099
C C +TF + + H + H +N
Sbjct: 69 KLTCLECMRTFKSSFSIWRHQVEVHNQN 96
Score = 36.0 bits (82), Expect = 0.017
Identities = 19/117 (16%), Positives = 38/117 (32%), Gaps = 33/117 (28%)
Query: 775 HLNPTKTFKCDLCSDRFSTSAKLKKHVDKIHFTPEFQEPSKKNEPLDTGDYTLEQWNELV 834
+ + ++C LC+ + S+ + H
Sbjct: 10 PVENKEVYQCRLCNAKLSSLLEQGSHERLCR----------------------------- 40
Query: 835 TAQSKDCPVCHKTYSTPKSMRKHLREVHSSQKKYVCDMCGKQFTSNNRVSQHKAYSH 891
+ CP C + +P+ ++H E KK C C + F S+ + +H+ H
Sbjct: 41 --NAAVCPYCSLRFFSPELKQEH--ESKCEYKKLTCLECMRTFKSSFSIWRHQVEVH 93
Score = 36.0 bits (82), Expect = 0.019
Identities = 19/90 (21%), Positives = 33/90 (36%), Gaps = 9/90 (10%)
Query: 104 TCRICTEVFENLTLLRRHMRVKHPGEQNLPCRLCDMSFSNKYQKKKHYSAFHKGMPFIPS 163
CR+C +L H R+ C C + F + K++H S
Sbjct: 18 QCRLCNAKLSSLLEQGSHERLCR---NAAVCPYCSLRFFSPELKQEHESKCEYK-----K 69
Query: 164 FTCPICQKIFKNKEWYLDH-LSLHEEQLIS 192
TC C + FK+ H + +H + ++
Sbjct: 70 LTCLECMRTFKSSFSIWRHQVEVHNQNNMA 99
Score = 35.6 bits (81), Expect = 0.024
Identities = 13/52 (25%), Positives = 24/52 (46%), Gaps = 2/52 (3%)
Query: 1299 CPVCHKTYSTPKTMRRHLRQVHTSQKRYLCDICGKQFTSTNRVNIHKACVHS 1350
CP C + +P+ + H + K+ C C + F S+ + H+ VH+
Sbjct: 45 CPYCSLRFFSPELKQEH--ESKCEYKKLTCLECMRTFKSSFSIWRHQVEVHN 94
Score = 35.3 bits (80), Expect = 0.041
Identities = 14/91 (15%), Positives = 26/91 (28%), Gaps = 10/91 (10%)
Query: 1508 QRKFECDFCKKKFYRNFDLQEHINTHTGNKPYQCQICNKSFGTRRNYRLHLKRHKRSAGQ 1567
+ ++C C K + H C C+ F + + H + +
Sbjct: 14 KEVYQCRLCNAKLSSLLEQGSHERLC--RNAAVCPYCSLRFFSPELKQEHESKCE----- 66
Query: 1568 LKPEDIHECKICHKIFLENSRLTRHMNFTHG 1598
C C + F + + RH H
Sbjct: 67 ---YKKLTCLECMRTFKSSFSIWRHQVEVHN 94
Score = 34.5 bits (78), Expect = 0.067
Identities = 17/92 (18%), Positives = 30/92 (32%), Gaps = 10/92 (10%)
Query: 251 NNKASFTCDTCDKPFDTIEKCRRHAIRMHMNPCKMFKCDICVASFLTPHKLKTHIKTKHR 310
NK + C C+ ++ + H C C F +P + H ++K
Sbjct: 12 ENKEVYQCRLCNAKLSSLLEQGSHERLCRNA----AVCPYCSLRFFSPELKQEH-ESKCE 66
Query: 311 TQLKELYTFECQHCEDKFSTPFELNKHNESKH 342
+ C C F + F + +H H
Sbjct: 67 YK-----KLTCLECMRTFKSSFSIWRHQVEVH 93
Score = 33.3 bits (75), Expect = 0.15
Identities = 15/76 (19%), Positives = 25/76 (32%), Gaps = 3/76 (3%)
Query: 1912 KAGEIPLEDTYLCDLCSKVFLEHKDMIRHREWVHGDKCHVCKVCGAKIKG-NMKRHMLSH 1970
A + ++ Y C LC+ + H VC C + +K+ S
Sbjct: 7 GASPVENKEVYQCRLCNAKLSSLLEQGSHERLCR--NAAVCPYCSLRFFSPELKQEHESK 64
Query: 1971 TGEKPFCCDICGKSLK 1986
K C C ++ K
Sbjct: 65 CEYKKLTCLECMRTFK 80
Score = 33.0 bits (74), Expect = 0.20
Identities = 13/78 (16%), Positives = 25/78 (32%)
Query: 987 VHGDKCHICKVCGAKIKGNLQKHMLSHTGEKPFCCHICGKSLKGNLKDHILKCHTGERPY 1046
V + + C++C AK+ L++ C C + +
Sbjct: 11 VENKEVYQCRLCNAKLSSLLEQGSHERLCRNAAVCPYCSLRFFSPELKQEHESKCEYKKL 70
Query: 1047 KCDVCGSSFKDKWYLGVH 1064
C C +FK + + H
Sbjct: 71 TCLECMRTFKSSFSIWRH 88
Score = 33.0 bits (74), Expect = 0.22
Identities = 14/63 (22%), Positives = 24/63 (38%), Gaps = 6/63 (9%)
Query: 127 PGEQNLPCRLCDMSFSNKYQKKKHYSAFHKGMPFIPSFTCPICQKIFKNKEWYLDHLSLH 186
++ CRLC+ S+ ++ H + CP C F + E +H S
Sbjct: 12 ENKEVYQCRLCNAKLSSLLEQGSHERLCRN------AAVCPYCSLRFFSPELKQEHESKC 65
Query: 187 EEQ 189
E +
Sbjct: 66 EYK 68
Score = 32.2 bits (72), Expect = 0.40
Identities = 20/119 (16%), Positives = 35/119 (29%), Gaps = 34/119 (28%)
Query: 747 KSKDSFHCDTCGKYFRSRQICNKHIKRVHLNPTKTFKCDLCSDRFSTSAKLKKHVDKIHF 806
++K+ + C C S H + C CS RF + ++H K +
Sbjct: 12 ENKEVYQCRLCNAKLSSLLEQGSHERLCR----NAAVCPYCSLRFFSPELKQEHESKCEY 67
Query: 807 TPEFQEPSKKNEPLDTGDYTLEQWNELVTAQSKDCPVCHKTYSTPKSMRKHLREVHSSQ 865
C C +T+ + S+ +H EVH+
Sbjct: 68 KK------------------------------LTCLECMRTFKSSFSIWRHQVEVHNQN 96
Score = 32.2 bits (72), Expect = 0.46
Identities = 13/51 (25%), Positives = 21/51 (41%), Gaps = 1/51 (1%)
Query: 1450 KCPVCHKTYSTPRQMRIHLREAHSQKKYACDVCGKQFTSTNRVSQHKAHSH 1500
CP C + +P + H KK C C + F S+ + +H+ H
Sbjct: 44 VCPYCSLRFFSPELKQEH-ESKCEYKKLTCLECMRTFKSSFSIWRHQVEVH 93
Score = 31.4 bits (70), Expect = 0.78
Identities = 14/94 (14%), Positives = 34/94 (36%), Gaps = 5/94 (5%)
Query: 951 RHKQLAGQLKPEDIHECKICHKTFLEKGSLAKHMNWVHGDKCHICKVCGAKIKG-NLQKH 1009
A ++ +++++C++C+ H +C C + L++
Sbjct: 3 SGSSGASPVENKEVYQCRLCNAKLSSLLEQGSHERLCR--NAAVCPYCSLRFFSPELKQE 60
Query: 1010 MLSHTGEKPFCCHICGKSLKG--NLKDHILKCHT 1041
S K C C ++ K ++ H ++ H
Sbjct: 61 HESKCEYKKLTCLECMRTFKSSFSIWRHQVEVHN 94
Score = 31.0 bits (69), Expect = 1.0
Identities = 15/87 (17%), Positives = 31/87 (35%), Gaps = 4/87 (4%)
Query: 1944 VHGDKCHVCKVCGAKIKGNMKRHMLSHTGEKPFCCDICGKSLKGN--LKAHILRCQGERP 2001
V + + C++C AK+ +++ C C + H +C+ +
Sbjct: 11 VENKEVYQCRLCNAKLSSLLEQGSHERLCRNAAVCPYCSLRFFSPELKQEHESKCE-YKK 69
Query: 2002 YKCDVCGSSFKDKKHFSVH-IRNHGED 2027
C C +FK H + H ++
Sbjct: 70 LTCLECMRTFKSSFSIWRHQVEVHNQN 96
Score = 31.0 bits (69), Expect = 1.1
Identities = 18/101 (17%), Positives = 33/101 (32%), Gaps = 10/101 (9%)
Query: 1780 GDFSLEQWRQLVAEKTKLCPVCNKEYATPVTMRKHLREVHVSKKKFKCDLCQKQFKASRS 1839
G + ++ C +CN + ++ + H R C C +F +
Sbjct: 1 GSSGSSGASPVENKEVYQCRLCNAKLSSLLEQGSHERLCR---NAAVCPYCSLRFFSPEL 57
Query: 1840 LQCHKQFVHLGVHKPKFLNMECDYCSRKFPSKNEVTNHIKS 1880
Q H+ K ++ + C C R F S + H
Sbjct: 58 KQEHES-------KCEYKKLTCLECMRTFKSSFSIWRHQVE 91
Score = 30.3 bits (67), Expect = 1.9
Identities = 11/66 (16%), Positives = 19/66 (28%), Gaps = 9/66 (13%)
Query: 1528 EHINTHTGNKPYQCQICNKSFGTRRNYRLHLKRHKRSAGQLKPEDIHECKICHKIFLENS 1587
+ + YQC++CN + H + + +A C C F
Sbjct: 6 SGASPVENKEVYQCRLCNAKLSSLLEQGSHERLCRNAA---------VCPYCSLRFFSPE 56
Query: 1588 RLTRHM 1593
H
Sbjct: 57 LKQEHE 62
>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}
Length = 129
Score = 45.3 bits (106), Expect = 2e-05
Identities = 28/127 (22%), Positives = 47/127 (37%), Gaps = 7/127 (5%)
Query: 592 VHSSIKRYMCDICGKQFTTLSYLDLHRKSHNETVKRKEEDKKYECDSC-NKKFWSKRALS 650
V S K+Y+ + K L+ ++ H T ++K + N + + +
Sbjct: 6 VDSGSKKYLSN--HKGIFIHVTLEELKRYHQLTPEQKRLIRAIVKTLIHNPQLLDESSYL 63
Query: 651 EHMIIHTGIKEHQCHVCNTAFYHIRSLSRHLKIHEYNESKMYKCPVCSKMFTELYEMKRH 710
++ I + C +C F SL +H++ E CPVC K FT H
Sbjct: 64 YRLLASKAISQFVCPLCLMPFSSSVSLKQHIRYTE----HTKVCPVCKKEFTSTDSALDH 119
Query: 711 RDHKHGG 717
KH
Sbjct: 120 VCKKHNI 126
Score = 40.7 bits (94), Expect = 8e-04
Identities = 16/125 (12%), Positives = 39/125 (31%), Gaps = 16/125 (12%)
Query: 1474 QKKYACDVCGKQFTSTNRVSQHKAHSHFGIIKTIQRKFECDFCKKKFYRNFDLQEHINTH 1533
K V ++ ++++ + I+KT + + L + +
Sbjct: 17 HKGIFIHVTLEELKRYHQLTPEQKRLIRAIVKT------LIHNPQLLDESSYLYRLLASK 70
Query: 1534 TGNKPYQCQICNKSFGTRRNYRLHLKRHKRSAGQLKPEDIHECKICHKIFLENSRLTRHM 1593
+ C +C F + + + H++ + + C +C K F H+
Sbjct: 71 AI-SQFVCPLCLMPFSSSVSLKQHIRYTEHT---------KVCPVCKKEFTSTDSALDHV 120
Query: 1594 NFTHG 1598
H
Sbjct: 121 CKKHN 125
Score = 39.9 bits (92), Expect = 0.001
Identities = 13/60 (21%), Positives = 20/60 (33%), Gaps = 2/60 (3%)
Query: 1037 LKCHTGERPYKCDVCGSSFKDKWYLGVHMRKHNGEKPYNCDYCGQTFAARSTFTFHLKKH 1096
L + C +C F L H+R E C C + F + + H+ K
Sbjct: 66 LLASKAISQFVCPLCLMPFSSSVSLKQHIRYT--EHTKVCPVCKKEFTSTDSALDHVCKK 123
Score = 39.5 bits (91), Expect = 0.002
Identities = 19/140 (13%), Positives = 46/140 (32%), Gaps = 16/140 (11%)
Query: 1807 TPVTMRKHLREVHVSKKKFKCDLCQKQFKASRSLQCHKQFVHLGVHKPKFLNMECDYCSR 1866
T + ++ + K + ++ K L ++ + + K +
Sbjct: 2 TESDVDSGSKKYLSNHKGIFIHVTLEELKRYHQLTPEQKRLIRAIVKTLI-------HNP 54
Query: 1867 KFPSKNEVTNHIKSHMGVRDILCPICKKGFIALKHMKTHLKKHMWKAGEIPLEDTYLCDL 1926
+ ++ + + + +CP+C F + +K H++ E T +C +
Sbjct: 55 QLLDESSYLYRLLASKAISQFVCPLCLMPFSSSVSLKQHIRYT---------EHTKVCPV 105
Query: 1927 CSKVFLEHKDMIRHREWVHG 1946
C K F + H H
Sbjct: 106 CKKEFTSTDSALDHVCKKHN 125
Score = 38.8 bits (89), Expect = 0.003
Identities = 19/122 (15%), Positives = 40/122 (32%), Gaps = 5/122 (4%)
Query: 772 KRVHLNPTKTFKCDLCSDRFSTSAKLKKHVDKIHFTPEFQEPSKKNEPLDTGDYTLEQWN 831
+ +L+ K + + +L ++ ++
Sbjct: 10 SKKYLSNHKGIFIHVTLEELKRYHQLTPEQKRLIRAIVKTLIHNPQLLDESSYLYRLL-- 67
Query: 832 ELVTAQSKDCPVCHKTYSTPKSMRKHLREVHSSQKKYVCDMCGKQFTSNNRVSQHKAYSH 891
CP+C +S+ S+++H+R + VC +C K+FTS + H H
Sbjct: 68 ASKAISQFVCPLCLMPFSSSVSLKQHIRYTEHT---KVCPVCKKEFTSTDSALDHVCKKH 124
Query: 892 FG 893
Sbjct: 125 NI 126
Score = 38.4 bits (88), Expect = 0.004
Identities = 16/87 (18%), Positives = 31/87 (35%), Gaps = 9/87 (10%)
Query: 1450 KCPVCHKTYSTPRQMRIHLREAHSQKKYACDVCGKQFTSTNRVSQHKAHSHFGIIKTIQR 1509
K + + L + + ++ C +C F+S+ + QH I+ +
Sbjct: 48 KTLIHNPQLLDESSYLYRLLASKAISQFVCPLCLMPFSSSVSLKQH--------IRYTEH 99
Query: 1510 KFECDFCKKKFYRNFDLQEHI-NTHTG 1535
C CKK+F +H+ H
Sbjct: 100 TKVCPVCKKEFTSTDSALDHVCKKHNI 126
Score = 38.4 bits (88), Expect = 0.004
Identities = 14/53 (26%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Query: 1798 CPVCNKEYATPVTMRKHLREVHVSKKKFKCDLCQKQFKASRSLQCHKQFVHLG 1850
CP+C +++ V++++H+R +K C +C+K+F ++ S H H
Sbjct: 77 CPLCLMPFSSSVSLKQHIRYTEHTK---VCPVCKKEFTSTDSALDHVCKKHNI 126
Score = 38.0 bits (87), Expect = 0.005
Identities = 17/65 (26%), Positives = 27/65 (41%), Gaps = 4/65 (6%)
Query: 360 YKEVVVSKSKQCPLCTKIFTTAKHMRVHLRSVHNGKERKFICDICGKQFTSNIHASRHKN 419
CPLC F+++ ++ H+R E +C +C K+FTS A H
Sbjct: 66 LLASKAISQFVCPLCLMPFSSSVSLKQHIRY----TEHTKVCPVCKKEFTSTDSALDHVC 121
Query: 420 YAHSR 424
H+
Sbjct: 122 KKHNI 126
Score = 38.0 bits (87), Expect = 0.006
Identities = 18/69 (26%), Positives = 30/69 (43%), Gaps = 4/69 (5%)
Query: 558 LEEYQQIVATKSKQCPICEKIFAAPKQMRMHLRHVHSSIKRYMCDICGKQFTTLSYLDLH 617
L A CP+C F++ ++ H+R+ + +C +C K+FT+ H
Sbjct: 63 LYRLLASKAISQFVCPLCLMPFSSSVSLKQHIRYTEHT---KVCPVCKKEFTSTDSALDH 119
Query: 618 -RKSHNETV 625
K HN V
Sbjct: 120 VCKKHNICV 128
Score = 38.0 bits (87), Expect = 0.007
Identities = 19/140 (13%), Positives = 46/140 (32%), Gaps = 16/140 (11%)
Query: 850 TPKSMRKHLREVHSSQKKYVCDMCGKQFTSNNRVSQHKAYSHFGIIKTIERKFECDYCKM 909
T + ++ S+ K + ++ ++++ + I+KT+ +
Sbjct: 2 TESDVDSGSKKYLSNHKGIFIHVTLEELKRYHQLTPEQKRLIRAIVKTLIHNPQ------ 55
Query: 910 KFKSKSFLSEHINTHTGNKPYQCQICKKSFANKRSYQRDLKRHKQLAGQLKPEDIHECKI 969
+S + + C +C F++ S ++ ++ E C +
Sbjct: 56 -LLDESSYLYRLLASKAISQFVCPLCLMPFSSSVSLKQHIRYT---------EHTKVCPV 105
Query: 970 CHKTFLEKGSLAKHMNWVHG 989
C K F S H+ H
Sbjct: 106 CKKEFTSTDSALDHVCKKHN 125
Score = 37.2 bits (85), Expect = 0.012
Identities = 13/94 (13%), Positives = 27/94 (28%), Gaps = 21/94 (22%)
Query: 434 CKRKFTCKRYLAEHINAHTGNTIYGCRICKKTFLYTNGLRRHILSRHKDTDVVILNEVKD 493
+ + + A + + C +C F + L++HI
Sbjct: 52 HNPQLLDESSYLYRLLASKAISQFVCPLCLMPFSSSVSLKQHIRYTEHTK---------- 101
Query: 494 IFPSHLQSYQIKCRYCARTFSTQNDLKEHVSSVH 527
C C + F++ + +HV H
Sbjct: 102 -----------VCPVCKKEFTSTDSALDHVCKKH 124
Score = 36.8 bits (84), Expect = 0.017
Identities = 17/66 (25%), Positives = 30/66 (45%), Gaps = 3/66 (4%)
Query: 1285 LEEYNKIVASGSKDCPVCHKTYSTPKTMRRHLRQVHTSQKRYLCDICGKQFTSTNRVNIH 1344
L A CP+C +S+ ++++H+R +C +C K+FTST+ H
Sbjct: 63 LYRLLASKAISQFVCPLCLMPFSSSVSLKQHIRYTE---HTKVCPVCKKEFTSTDSALDH 119
Query: 1345 KACVHS 1350
H+
Sbjct: 120 VCKKHN 125
Score = 36.1 bits (82), Expect = 0.030
Identities = 14/61 (22%), Positives = 19/61 (31%), Gaps = 4/61 (6%)
Query: 1966 HMLSHTGEKPFCCDICGKSLK--GNLKAHILRCQGERPYKCDVCGSSFKDKKHFSVHIRN 2023
+L+ F C +C +LK HI E C VC F H+
Sbjct: 65 RLLASKAISQFVCPLCLMPFSSSVSLKQHIR--YTEHTKVCPVCKKEFTSTDSALDHVCK 122
Query: 2024 H 2024
Sbjct: 123 K 123
Score = 36.1 bits (82), Expect = 0.032
Identities = 13/78 (16%), Positives = 30/78 (38%), Gaps = 4/78 (5%)
Query: 1301 VCHKTYSTPKTMRRHLRQVHTSQKRYLCDICGKQFTSTNRVNIHKACVHSSTGNKFECIY 1360
+ H ++ + + +++C +C F+S+ + H T + C
Sbjct: 50 LIHNPQLLDESSYLYRLLASKAISQFVCPLCLMPFSSSVSLKQHI----RYTEHTKVCPV 105
Query: 1361 CKKKYRRKFDLKEHINKH 1378
CKK++ +H+ K
Sbjct: 106 CKKEFTSTDSALDHVCKK 123
Score = 35.3 bits (80), Expect = 0.053
Identities = 16/102 (15%), Positives = 36/102 (35%), Gaps = 14/102 (13%)
Query: 557 SLEEYQQIVATKSKQCPICEKIF-----AAPKQMRMHLRHVHSSIKRYMCDICGKQFTTL 611
L+ Y Q+ + + K + ++ +I +++C +C F++
Sbjct: 28 ELKRYHQLTPEQKRLIRAIVKTLIHNPQLLDESSYLYRLLASKAISQFVCPLCLMPFSSS 87
Query: 612 SYLDLHRKSHNETVKRKEEDKKYECDSCNKKFWSKRALSEHM 653
L H + + C C K+F S + +H+
Sbjct: 88 VSLKQHIRYT---------EHTKVCPVCKKEFTSTDSALDHV 120
Score = 32.2 bits (72), Expect = 0.58
Identities = 14/57 (24%), Positives = 22/57 (38%), Gaps = 4/57 (7%)
Query: 254 ASFTCDTCDKPFDTIEKCRRHAIRMHMNPCKMFKCDICVASFLTPHKLKTHIKTKHR 310
+ F C C PF + ++H IR + C +C F + H+ KH
Sbjct: 73 SQFVCPLCLMPFSSSVSLKQH-IRYTEHT---KVCPVCKKEFTSTDSALDHVCKKHN 125
Score = 31.8 bits (71), Expect = 0.79
Identities = 16/103 (15%), Positives = 35/103 (33%), Gaps = 11/103 (10%)
Query: 1000 AKIKGNLQKHMLSHTGEKPFCCHICGKSLKGNLKDHILKCHTGERPYKCDV----CGSSF 1055
+ + +K++ +H G H+ + LK + H L +R + V
Sbjct: 4 SDVDSGSKKYLSNHKG---IFIHVTLEELK---RYHQLTPE-QKRLIRAIVKTLIHNPQL 56
Query: 1056 KDKWYLGVHMRKHNGEKPYNCDYCGQTFAARSTFTFHLKKHEE 1098
D+ + + C C F++ + H++ E
Sbjct: 57 LDESSYLYRLLASKAISQFVCPLCLMPFSSSVSLKQHIRYTEH 99
Score = 31.1 bits (69), Expect = 1.7
Identities = 16/62 (25%), Positives = 25/62 (40%), Gaps = 6/62 (9%)
Query: 122 MRVKHPGEQNLPCRLCDMSFSNKYQKKKHYSAFHKGMPFIPSFTCPICQKIFKNKEWYLD 181
+ C LC M FS+ K+H + CP+C+K F + + LD
Sbjct: 65 RLLASKAISQFVCPLCLMPFSSSVSLKQHIRYTEH------TKVCPVCKKEFTSTDSALD 118
Query: 182 HL 183
H+
Sbjct: 119 HV 120
Score = 30.7 bits (68), Expect = 2.3
Identities = 12/54 (22%), Positives = 20/54 (37%), Gaps = 3/54 (5%)
Query: 104 TCRICTEVFENLTLLRRHMRVKHPGEQNLPCRLCDMSFSNKYQKKKHYSAFHKG 157
C +C F + L++H+R E C +C F++ H H
Sbjct: 76 VCPLCLMPFSSSVSLKQHIRYT---EHTKVCPVCKKEFTSTDSALDHVCKKHNI 126
Score = 30.3 bits (67), Expect = 2.4
Identities = 11/41 (26%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 1353 GNKFECIYCKKKYRRKFDLKEHINKHTGNKPYHCQICKESF 1393
++F C C + LK+HI C +CK+ F
Sbjct: 72 ISQFVCPLCLMPFSSSVSLKQHIRYTE--HTKVCPVCKKEF 110
Score = 30.3 bits (67), Expect = 2.9
Identities = 14/109 (12%), Positives = 29/109 (26%), Gaps = 7/109 (6%)
Query: 907 CKMKFKSKSFLSEHINTHTGNKPYQCQICKKSFANKRSYQRDLKRHKQLAGQLKPEDIHE 966
+ + H T + + + + + K
Sbjct: 20 IFIHVTLEELKRYHQLTPEQKRLIRAIVKTLIHNPQLLDESSYLYRLL---ASKAISQFV 76
Query: 967 CKICHKTFLEKGSLAKHMNWVHGDKCHICKVCGAKIK--GNLQKHMLSH 1013
C +C F SL +H+ + K +C VC + + H+
Sbjct: 77 CPLCLMPFSSSVSLKQHIRYTEHTK--VCPVCKKEFTSTDSALDHVCKK 123
Score = 29.1 bits (64), Expect = 6.2
Identities = 12/33 (36%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Query: 692 YKCPVCSKMFTELYEMKRH-RDHKHGGKCHVCK 723
+ CP+C F+ +K+H R +H C VCK
Sbjct: 75 FVCPLCLMPFSSSVSLKQHIRYTEHTKVCPVCK 107
>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens}
Length = 98
Score = 42.6 bits (99), Expect = 7e-05
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 1785 EQWRQLVAEKTKL-CPVCNK-EYATPVTMRKHLREVHVSKKKFKCDLCQKQFKASRSLQC 1842
EQW++ + E+ + CP CN T V ++KH+ + KC C+KQFK+ L
Sbjct: 13 EQWQRAIHERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNY 72
Query: 1843 HKQFVH 1848
H H
Sbjct: 73 HTMAEH 78
Score = 39.5 bits (91), Expect = 0.001
Identities = 19/67 (28%), Positives = 27/67 (40%), Gaps = 1/67 (1%)
Query: 1286 EEYNKIVASGSKDCPVCHK-TYSTPKTMRRHLRQVHTSQKRYLCDICGKQFTSTNRVNIH 1344
+ I G CP C+ T T +++H+ Q C C KQF S +N H
Sbjct: 14 QWQRAIHERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYH 73
Query: 1345 KACVHSS 1351
HS+
Sbjct: 74 TMAEHSA 80
Score = 38.8 bits (89), Expect = 0.002
Identities = 19/66 (28%), Positives = 28/66 (42%), Gaps = 2/66 (3%)
Query: 828 EQWNELVTAQSK-DCPVCHK-TYSTPKSMRKHLREVHSSQKKYVCDMCGKQFTSNNRVSQ 885
EQW + + + CP C+ T T ++KH+ Q C C KQF S ++
Sbjct: 13 EQWQRAIHERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNY 72
Query: 886 HKAYSH 891
H H
Sbjct: 73 HTMAEH 78
Score = 36.8 bits (84), Expect = 0.009
Identities = 19/56 (33%), Positives = 24/56 (42%), Gaps = 1/56 (1%)
Query: 1018 PFCCHICGKSLKGNLKDHILKCHTGERPYKCDVCGSSFKDKWYLGVHMRKHNGEKP 1073
P C + K+L G LK H+ C + KC C FK K L H + KP
Sbjct: 28 PTCNVVTRKTLVG-LKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEHSAKP 82
Score = 35.3 bits (80), Expect = 0.029
Identities = 17/84 (20%), Positives = 28/84 (33%), Gaps = 2/84 (2%)
Query: 554 GGLSLEEYQQIVATKSKQCPICEKIFAAP-KQMRMHLRHVHSSIKRYMCDICGKQFTTLS 612
GG + + I CP C + ++ H+ C C KQF + +
Sbjct: 9 GGPEEQWQRAIHERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKA 68
Query: 613 YLDLH-RKSHNETVKRKEEDKKYE 635
L+ H H+ E + E
Sbjct: 69 GLNYHTMAEHSAKPSDAEASEGGE 92
Score = 34.5 bits (78), Expect = 0.060
Identities = 17/59 (28%), Positives = 23/59 (38%), Gaps = 1/59 (1%)
Query: 102 RRTCRICTEVF-ENLTLLRRHMRVKHPGEQNLPCRLCDMSFSNKYQKKKHYSAFHKGMP 159
C C V + L L++HM V + L C+ C F +K H A H P
Sbjct: 24 EAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEHSAKP 82
Score = 33.0 bits (74), Expect = 0.18
Identities = 15/53 (28%), Positives = 19/53 (35%), Gaps = 3/53 (5%)
Query: 992 CHICKVCGAKIKGNLQKHMLS-HTGEKPFCCHICGKSL--KGNLKDHILKCHT 1041
C C V K L+KHM + C C K K L H + H+
Sbjct: 27 CPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEHS 79
Score = 31.1 bits (69), Expect = 0.83
Identities = 16/73 (21%), Positives = 26/73 (35%), Gaps = 2/73 (2%)
Query: 352 TGGYTYEEYKEVVVSKSKQCPLCTKIF-TTAKHMRVHLRSVHNGKERKFICDICGKQFTS 410
GG + + + CP C + T ++ H+ ++ C C KQF S
Sbjct: 8 PGGPEEQWQRAIHERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQD-ALKCQHCRKQFKS 66
Query: 411 NIHASRHKNYAHS 423
+ H HS
Sbjct: 67 KAGLNYHTMAEHS 79
Score = 30.3 bits (67), Expect = 1.5
Identities = 14/56 (25%), Positives = 19/56 (33%), Gaps = 3/56 (5%)
Query: 1949 CHVCKVCGAKIKGNMKRHMLS-HTGEKPFCCDICGKSL--KGNLKAHILRCQGERP 2001
C C V K +K+HM + C C K K L H + +P
Sbjct: 27 CPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEHSAKP 82
Score = 30.3 bits (67), Expect = 1.8
Identities = 17/49 (34%), Positives = 22/49 (44%), Gaps = 2/49 (4%)
Query: 1975 PFCCDICGKSLKGNLKAHILRCQ-GERPYKCDVCGSSFKDKKHFSVHIR 2022
P C + K+L G LK H+ CQ + KC C FK K + H
Sbjct: 28 PTCNVVTRKTLVG-LKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTM 75
Score = 29.9 bits (66), Expect = 2.2
Identities = 15/70 (21%), Positives = 24/70 (34%), Gaps = 4/70 (5%)
Query: 1469 REAHSQKKYACDVCGKQFTSTNRVSQHKAHSHFGIIKTIQRKFECDFCKKKFYRNFDLQE 1528
R H + + C C R + H + + +Q +C C+K+F L
Sbjct: 17 RAIHERGEAVCPTCN----VVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNY 72
Query: 1529 HINTHTGNKP 1538
H KP
Sbjct: 73 HTMAEHSAKP 82
Score = 29.5 bits (65), Expect = 3.3
Identities = 17/81 (20%), Positives = 32/81 (39%), Gaps = 4/81 (4%)
Query: 849 STPKSMRKHLREVHSSQKKYVCDMCGKQFTSNNRVSQHKAYSHFGIIKTIERKFECDYCK 908
S P + + + + VC C R + H + + ++ +C +C+
Sbjct: 6 SGPGGPEEQWQRAIHERGEAVCPTCNVVT----RKTLVGLKKHMEVCQKLQDALKCQHCR 61
Query: 909 MKFKSKSFLSEHINTHTGNKP 929
+FKSK+ L+ H KP
Sbjct: 62 KQFKSKAGLNYHTMAEHSAKP 82
Score = 28.0 bits (61), Expect = 9.3
Identities = 14/59 (23%), Positives = 18/59 (30%)
Query: 747 KSKDSFHCDTCGKYFRSRQICNKHIKRVHLNPTKTFKCDLCSDRFSTSAKLKKHVDKIH 805
+ C TC R + K V KC C +F + A L H H
Sbjct: 20 HERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEH 78
Score = 28.0 bits (61), Expect = 9.9
Identities = 14/60 (23%), Positives = 23/60 (38%), Gaps = 2/60 (3%)
Query: 660 KEHQCHVCNTAFYH-IRSLSRHLKIHEYNESKMYKCPVCSKMFTELYEMKRHRDHKHGGK 718
E C CN + L +H+++ + + KC C K F + H +H K
Sbjct: 23 GEAVCPTCNVVTRKTLVGLKKHMEVCQKLQ-DALKCQHCRKQFKSKAGLNYHTMAEHSAK 81
>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger,
transcription factor, DNA binding protein; NMR {Mus
musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A
Length = 37
Score = 40.0 bits (94), Expect = 2e-04
Identities = 14/33 (42%), Positives = 18/33 (54%)
Query: 1529 HINTHTGNKPYQCQICNKSFGTRRNYRLHLKRH 1561
TG KP+QC C++SF + LH KRH
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34
Score = 39.2 bits (92), Expect = 3e-04
Identities = 10/29 (34%), Positives = 17/29 (58%)
Query: 1040 HTGERPYKCDVCGSSFKDKWYLGVHMRKH 1068
TG +P++C C SF +L +H ++H
Sbjct: 6 STGIKPFQCPDCDRSFSRSDHLALHRKRH 34
Score = 38.9 bits (91), Expect = 3e-04
Identities = 10/33 (30%), Positives = 15/33 (45%)
Query: 1064 HMRKHNGEKPYNCDYCGQTFAARSTFTFHLKKH 1096
R G KP+ C C ++F+ H K+H
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34
Score = 35.0 bits (81), Expect = 0.009
Identities = 12/33 (36%), Positives = 15/33 (45%)
Query: 920 HINTHTGNKPYQCQICKKSFANKRSYQRDLKRH 952
TG KP+QC C +SF+ KRH
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34
Score = 34.6 bits (80), Expect = 0.010
Identities = 9/27 (33%), Positives = 15/27 (55%)
Query: 1998 GERPYKCDVCGSSFKDKKHFSVHIRNH 2024
G +P++C C SF H ++H + H
Sbjct: 8 GIKPFQCPDCDRSFSRSDHLALHRKRH 34
Score = 33.1 bits (76), Expect = 0.037
Identities = 12/33 (36%), Positives = 15/33 (45%)
Query: 652 HMIIHTGIKEHQCHVCNTAFYHIRSLSRHLKIH 684
TGIK QC C+ +F L+ H K H
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34
Score = 32.7 bits (75), Expect = 0.046
Identities = 12/34 (35%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 588 HLRHVHSSIKRYMCDICGKQFTTLSYLDLHRKSH 621
R + IK + C C + F+ +L LHRK H
Sbjct: 2 STR-GSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34
Score = 32.3 bits (74), Expect = 0.066
Identities = 8/19 (42%), Positives = 9/19 (47%)
Query: 1009 HMLSHTGEKPFCCHICGKS 1027
TG KPF C C +S
Sbjct: 2 STRGSTGIKPFQCPDCDRS 20
Score = 32.3 bits (74), Expect = 0.070
Identities = 8/19 (42%), Positives = 9/19 (47%)
Query: 1966 HMLSHTGEKPFCCDICGKS 1984
TG KPF C C +S
Sbjct: 2 STRGSTGIKPFQCPDCDRS 20
Score = 31.5 bits (72), Expect = 0.14
Identities = 10/34 (29%), Positives = 16/34 (47%)
Query: 1877 HIKSHMGVRDILCPICKKGFIALKHMKTHLKKHM 1910
+ G++ CP C + F H+ H K+HM
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHM 35
Score = 30.0 bits (68), Expect = 0.45
Identities = 8/20 (40%), Positives = 9/20 (45%)
Query: 1374 HINKHTGNKPYHCQICKESF 1393
TG KP+ C C SF
Sbjct: 2 STRGSTGIKPFQCPDCDRSF 21
Score = 28.5 bits (64), Expect = 1.7
Identities = 9/28 (32%), Positives = 13/28 (46%)
Query: 1506 TIQRKFECDFCKKKFYRNFDLQEHINTH 1533
T + F+C C + F R+ L H H
Sbjct: 7 TGIKPFQCPDCDRSFSRSDHLALHRKRH 34
Score = 26.9 bits (60), Expect = 5.3
Identities = 8/28 (28%), Positives = 11/28 (39%)
Query: 897 TIERKFECDYCKMKFKSKSFLSEHINTH 924
T + F+C C F L+ H H
Sbjct: 7 TGIKPFQCPDCDRSFSRSDHLALHRKRH 34
Score = 26.9 bits (60), Expect = 6.4
Identities = 7/30 (23%), Positives = 14/30 (46%), Gaps = 1/30 (3%)
Query: 1315 HLRQVHTSQKRYLCDICGKQFTSTNRVNIH 1344
R T K + C C + F+ ++ + +H
Sbjct: 2 STRG-STGIKPFQCPDCDRSFSRSDHLALH 30
Score = 26.9 bits (60), Expect = 6.7
Identities = 11/26 (42%), Positives = 12/26 (46%), Gaps = 1/26 (3%)
Query: 780 KTFKCDLCSDRFSTSAKLKKHVDKIH 805
K F+C C FS S L H K H
Sbjct: 10 KPFQCPDCDRSFSRSDHLALHR-KRH 34
Score = 26.5 bits (59), Expect = 7.8
Identities = 8/31 (25%), Positives = 13/31 (41%), Gaps = 2/31 (6%)
Query: 387 HLRSVHNGKERKFICDICGKQFTSNIHASRH 417
R G + F C C + F+ + H + H
Sbjct: 2 STRG-STG-IKPFQCPDCDRSFSRSDHLALH 30
>1ej6_B Lambda1; icosahedral, non-equivalence, dsRNA virus, methylase,
methyltransferase, guanylyltransferase, zinc finger,
icosahedral virus; 3.60A {Reovirus SP} SCOP: i.7.1.1 PDB:
2cse_V
Length = 1275
Score = 45.6 bits (107), Expect = 2e-04
Identities = 31/218 (14%), Positives = 71/218 (32%), Gaps = 19/218 (8%)
Query: 1144 RIVRERDRVVCARASPWVPKDELTTSRKILSTELQEEQSSLERQNDEDSFKCDIRGKCLK 1203
RI R+ + + + + +S+ + ++ E +
Sbjct: 3 RIPRKTKGKSSGKGNDSTERSDDGSSQLRDKQNNKAGPATTEPGTSNRE----------Q 52
Query: 1204 TQEKYNILNVQIYLNPNSKSELSSHGLTTSKNLDKYIDILNSNQESLDLDTSDYSLEENE 1263
+ + I +VQ ++ T K + D++N + E+ D + + + ++ +
Sbjct: 53 YRARPGIASVQRATESAELPMKNNDEGTPDKKGNTRGDLVNEHSEAKD-EADEATQKQAK 111
Query: 1264 EWNKITYEVETNEPMDTGDYTLEEYNKI-VASGSKDCPVCHKTYSTPKTMRRH------L 1316
+ +K +V ++ L + GS P+ + + L
Sbjct: 112 DTDKSKAQVTYSDTGINNANELSRSGNVDNEGGSNQKPMSTRIAEATSAIVSKHPARVGL 171
Query: 1317 RQVHTSQKRYLCDICGKQFTSTNRVNIHKACVHSSTGN 1354
+S Y C +C S ++ H A H GN
Sbjct: 172 PPTASSGHGYQCHVCSAVLFSPLDLDAHVA-SHGLHGN 208
Score = 44.1 bits (103), Expect = 6e-04
Identities = 18/111 (16%), Positives = 31/111 (27%), Gaps = 13/111 (11%)
Query: 514 STQNDLKEHVSSVHMFMTESFENPNEPRVLNSNRYPLAIDGGLSLEEYQQIVATKSKQCP 573
++ K + + N N +GG + + ++
Sbjct: 109 QAKDTDKSKAQVTYSDTGINNANELSRSGNVDN------EGGSNQKP------MSTRIAE 156
Query: 574 ICEKIFAAPKQMRMHLRHVHSSIKRYMCDICGKQFTTLSYLDLHRKSHNET 624
I + R+ L SS Y C +C + LD H SH
Sbjct: 157 ATSAIVS-KHPARVGLPPTASSGHGYQCHVCSAVLFSPLDLDAHVASHGLH 206
Score = 42.5 bits (99), Expect = 0.002
Identities = 16/148 (10%), Positives = 46/148 (31%), Gaps = 4/148 (2%)
Query: 1698 EVIESQEPMDTGDYSLEQWNEMVASKSKECPVCHKTSMESSSSDINKQTFPKTSKTSTSE 1757
+ Q ++ + ++ +E K + S + D + + ++
Sbjct: 58 GIASVQRATESAELPMKNNDEGTPDKKGN-TRGDLVNEHSEAKD--EADEATQKQAKDTD 114
Query: 1758 NENHKPSCGNSFMVHKNQPIDTGDFSLEQWRQLVAEKTKLCPVCNKEYATPVTMRKHLRE 1817
+ + ++ + + N+ +G+ E T++ + + R L
Sbjct: 115 KSKAQVTYSDTGINNANELSRSGNVDNEGGSNQKPMSTRIAEATSAI-VSKHPARVGLPP 173
Query: 1818 VHVSKKKFKCDLCQKQFKASRSLQCHKQ 1845
S ++C +C + L H
Sbjct: 174 TASSGHGYQCHVCSAVLFSPLDLDAHVA 201
Score = 40.6 bits (94), Expect = 0.006
Identities = 15/100 (15%), Positives = 28/100 (28%), Gaps = 13/100 (13%)
Query: 807 TPEFQEPSKKNEPLDTGDYTLEQWNELVTAQSKD-------CPVCHKTYSTPKSMRKHLR 859
+ ++ K + D + NEL + + D P+ + ++
Sbjct: 107 QKQAKDTDKSKAQVTYSDTGINNANELSRSGNVDNEGGSNQKPMSTRIAEATSAIVSKHP 166
Query: 860 EV------HSSQKKYVCDMCGKQFTSNNRVSQHKAYSHFG 893
SS Y C +C S + H A
Sbjct: 167 ARVGLPPTASSGHGYQCHVCSAVLFSPLDLDAHVASHGLH 206
Score = 40.2 bits (93), Expect = 0.008
Identities = 11/57 (19%), Positives = 13/57 (22%)
Query: 1446 SGTKKCPVCHKTYSTPRQMRIHLREAHSQKKYACDVCGKQFTSTNRVSQHKAHSHFG 1502
T+ S A S Y C VC S + H A
Sbjct: 150 MSTRIAEATSAIVSKHPARVGLPPTASSGHGYQCHVCSAVLFSPLDLDAHVASHGLH 206
Score = 36.4 bits (83), Expect = 0.14
Identities = 6/55 (10%), Positives = 13/55 (23%)
Query: 1047 KCDVCGSSFKDKWYLGVHMRKHNGEKPYNCDYCGQTFAARSTFTFHLKKHEENGS 1101
+ + + Y C C + H+ H +G+
Sbjct: 154 IAEATSAIVSKHPARVGLPPTASSGHGYQCHVCSAVLFSPLDLDAHVASHGLHGN 208
Score = 36.0 bits (82), Expect = 0.16
Identities = 10/90 (11%), Positives = 23/90 (25%), Gaps = 1/90 (1%)
Query: 1487 TSTNRVSQHKAHSHFGIIKTIQRKFECDFCKKKFYRNFDLQEHINTHTGNKPYQCQICNK 1546
+ + G + + ++ T + YQC +C+
Sbjct: 129 NANELSRSGNVDNEGGSNQKPMSTRIAEATSAIVSKHPARVGLPPTASSGHGYQCHVCSA 188
Query: 1547 SFGTRRNYRLHLKRHKR-SAGQLKPEDIHE 1575
+ + H+ H L +I
Sbjct: 189 VLFSPLDLDAHVASHGLHGNMTLTSSEIQR 218
Score = 36.0 bits (82), Expect = 0.18
Identities = 11/64 (17%), Positives = 21/64 (32%)
Query: 621 HNETVKRKEEDKKYECDSCNKKFWSKRALSEHMIIHTGIKEHQCHVCNTAFYHIRSLSRH 680
NE ++ ++ + A + +QCHVC+ + L H
Sbjct: 140 DNEGGSNQKPMSTRIAEATSAIVSKHPARVGLPPTASSGHGYQCHVCSAVLFSPLDLDAH 199
Query: 681 LKIH 684
+ H
Sbjct: 200 VASH 203
Score = 35.6 bits (81), Expect = 0.24
Identities = 8/48 (16%), Positives = 14/48 (29%)
Query: 609 TTLSYLDLHRKSHNETVKRKEEDKKYECDSCNKKFWSKRALSEHMIIH 656
S + + Y+C C+ +S L H+ H
Sbjct: 156 EATSAIVSKHPARVGLPPTASSGHGYQCHVCSAVLFSPLDLDAHVASH 203
Score = 35.6 bits (81), Expect = 0.24
Identities = 9/58 (15%), Positives = 15/58 (25%), Gaps = 5/58 (8%)
Query: 366 SKSKQCPLCTKIFTTAKHMRVH-----LRSVHNGKERKFICDICGKQFTSNIHASRHK 418
S Q P+ T+I + + C +C S + H
Sbjct: 143 GGSNQKPMSTRIAEATSAIVSKHPARVGLPPTASSGHGYQCHVCSAVLFSPLDLDAHV 200
Score = 35.2 bits (80), Expect = 0.31
Identities = 8/75 (10%), Positives = 16/75 (21%)
Query: 878 TSNNRVSQHKAYSHFGIIKTIERKFECDYCKMKFKSKSFLSEHINTHTGNKPYQCQICKK 937
+N + G + + T + YQC +C
Sbjct: 129 NANELSRSGNVDNEGGSNQKPMSTRIAEATSAIVSKHPARVGLPPTASSGHGYQCHVCSA 188
Query: 938 SFANKRSYQRDLKRH 952
+ + H
Sbjct: 189 VLFSPLDLDAHVASH 203
Score = 34.4 bits (78), Expect = 0.46
Identities = 7/31 (22%), Positives = 11/31 (35%)
Query: 1998 GERPYKCDVCGSSFKDKKHFSVHIRNHGEDK 2028
Y+C VC + H+ +HG
Sbjct: 177 SGHGYQCHVCSAVLFSPLDLDAHVASHGLHG 207
Score = 34.1 bits (77), Expect = 0.58
Identities = 11/80 (13%), Positives = 29/80 (36%), Gaps = 6/80 (7%)
Query: 496 PSHLQSYQIKCRYCARTFSTQNDLKEHVSSVHMFMTESFENPNEPRVLNS------NRYP 549
P+ + +C C+ + DL HV+S + + + R + N
Sbjct: 173 PTASSGHGYQCHVCSAVLFSPLDLDAHVASHGLHGNMTLTSSEIQRHITEFISSWQNHPI 232
Query: 550 LAIDGGLSLEEYQQIVATKS 569
+ + + ++ Q++ +
Sbjct: 233 VQVSADVENKKTAQLLHADT 252
Score = 33.7 bits (76), Expect = 0.85
Identities = 7/29 (24%), Positives = 11/29 (37%)
Query: 1040 HTGERPYKCDVCGSSFKDKWYLGVHMRKH 1068
+ Y+C VC + L H+ H
Sbjct: 175 ASSGHGYQCHVCSAVLFSPLDLDAHVASH 203
Score = 33.3 bits (75), Expect = 1.1
Identities = 23/192 (11%), Positives = 49/192 (25%), Gaps = 7/192 (3%)
Query: 1694 KNKHEVIESQEPMDTGDYSLEQWNEMVASKSKECPVCHKTSMESSSSDINKQTFPKTSKT 1753
K S + ++ N + E ++ + + Q ++++
Sbjct: 15 KGNDSTERSDDG---SSQLRDKQNNKAGPATTEPGTSNREQYRARPGIASVQRATESAEL 71
Query: 1754 STSENENHKPSCGNSFMVHKNQPIDTGDFSLEQWRQ-LVAEKTKLCPVCNKEYATPVTMR 1812
N+ P + ++ Q + K
Sbjct: 72 PMKNNDEGTPDKKGNTRGDLVNEHSEAKDEADEATQKQAKDTDKSKAQVTYSDTGINNAN 131
Query: 1813 KHLREVHVSKK---KFKCDLCQKQFKASRSLQCHKQFVHLGVHKPKFLNMECDYCSRKFP 1869
+ R +V + K + S + H V L +C CS
Sbjct: 132 ELSRSGNVDNEGGSNQKPMSTRIAEATSAIVSKHPARVGLPPTASSGHGYQCHVCSAVLF 191
Query: 1870 SKNEVTNHIKSH 1881
S ++ H+ SH
Sbjct: 192 SPLDLDAHVASH 203
Score = 32.5 bits (73), Expect = 1.9
Identities = 10/47 (21%), Positives = 19/47 (40%)
Query: 284 KMFKCDICVASFLTPHKLKTHIKTKHRTQLKELYTFECQHCEDKFST 330
++C +C A +P L H+ + L + E Q +F +
Sbjct: 179 HGYQCHVCSAVLFSPLDLDAHVASHGLHGNMTLTSSEIQRHITEFIS 225
>3ucp_A UNDA; beta-barrel, C-type cytochrome, electron transport, C-type H
cell surface, transport protein; HET: HEC; 1.76A
{Shewanella SP} PDB: 3ufh_A* 3ufk_A*
Length = 874
Score = 42.0 bits (96), Expect = 0.003
Identities = 47/339 (13%), Positives = 76/339 (22%), Gaps = 23/339 (6%)
Query: 834 VTAQSKDCPVCHKTYSTPKSMRKHLREVHSSQKKYV--CDMCGKQFTSNNRVSQHKAYSH 891
V +C CH T + S +H ++ + C +C ++ +
Sbjct: 246 VVDLEANCIKCHSTNYSDTSSTAKPLALHGGRRIGIANCQVCHTSYSKDPETGSPLDMGA 305
Query: 892 FGIIKTIERKFECDYCKMKFKSKSFLSEHINTHTGNKPYQCQICKKSFANKRSYQRDLKR 951
+ S +G Y + +
Sbjct: 306 M-----------VHAIHKGTYAMVGYSGTAYDFSGTMAKAAAES--------GYPQYREG 346
Query: 952 HKQLAGQLKPEDIHECKICHKTFLEKGSLAKHMNWVHGDKCHICKVCGAKIKGNLQKHML 1011
P I C+ CH T + A G C C + G N +
Sbjct: 347 KDVSERVTLPVSIGNCQSCHSTDDKGPVDAASFKHHKGLACASCHMSGFNPVDNSEWLTP 406
Query: 1012 SHTGEKPFCCHICGKSLKGNLKDHIL--KCHTGERPYKCDVCGSSFKDKWYLGVHMRKHN 1069
+ D I + C C + ++ H+ K N
Sbjct: 407 PEGQKDRGFVGNYFHYYATPEIDGIPGVNLVHVFQNGGCASCHAEQGEEGSAKYHLAKAN 466
Query: 1070 GEKPYNCDYCGQTFAARSTFTFHLKKHEENGSVDFDEIVESRTVGVIGYLNLSYSIVIQN 1129
K +Y + N D + + L
Sbjct: 467 ATKLLRTEYAYKLENGTFDVAKGELTFTVNWHSDVAPHQDPKVKEFWVSLTAFNGTEYTM 526
Query: 1130 GGDGSKSCLLRCANRIVRERDRVVCARASPWVPKDELTT 1168
G S L R NRI +V VP T
Sbjct: 527 GPRPSNGTLGRSENRISVNLAKVETNANLTAVPNGSKVT 565
Score = 31.9 bits (70), Expect = 2.7
Identities = 62/493 (12%), Positives = 114/493 (23%), Gaps = 39/493 (7%)
Query: 1293 ASGSKDCPVCHKTYSTPKTMRRHLRQVHTSQKRYLCDICGKQFTSTNRVNIHKACVHSST 1352
C CH + P L + R + + I +
Sbjct: 381 HHKGLACASCHMSGFNPVDNSEWLTPPEGQKDRGFVGNYFHYYATPEIDGIPGVNLVHVF 440
Query: 1353 GNKFECIYCKKKYRRKFDLKEHINKHTGNKPYHCQIC-KESFYTLKTYRGDLKRHEQLAE 1411
N C C + + K H+ K K + K T +G+L
Sbjct: 441 QNG-GCASCHAEQGEEGSAKYHLAKANATKLLRTEYAYKLENGTFDVAKGELTFTVNWH- 498
Query: 1412 QSDEMHSTSKFQNKIKKPLDTGDLSWEEWNELVLSGTKKCPVCHKTYSTPRQMRIHLREA 1471
SD + L + + +GT + + + A
Sbjct: 499 -SDVAPHQDPKVKEFWVSLTAFNGTEYTMGPRPSNGTLGRSENRISVNLAKVETNANLTA 557
Query: 1472 H-SQKKYACDVCGKQFTSTNRVSQHKAHSHFGIIKTIQRKFECDFCKKKFYRNFDLQEHI 1530
+ K + G + +K G + C + +
Sbjct: 558 VPNGSKVTYTLTGIKAVIGTSSVPYKQIVSIGKGFMDGKLLICANSAELDPTMDAAIDCS 617
Query: 1531 NTHTGNKPYQCQICNKSFGTRRNYRLHLKRHKRSAGQLKPEDIHECKICHKIFLENSRLT 1590
NT SF + + +C CH
Sbjct: 618 NTEAPIYEVIVGSNKASFSADASN---------VTARSIVISEAKCANCHG--------E 660
Query: 1591 RHMNFTHGDKCHGATNSTDKIFRDADSIVHPNSTVWAKRLITELKEDEYSSLKRAISKGS 1650
+ H A + ++ + + + S K
Sbjct: 661 KADFSASHALTHAADKPDNSCGTCHSAVPNTAVALADGSCVACHNGAPAHSKKPFERGFD 720
Query: 1651 FKCGICGKCYKTREKCRRHIKRIHLNSRNEPSNMGDYSLEEWNKNKHEVIESQEPMDTGD 1710
FK I TR ++R+ ++ P N + H+ +
Sbjct: 721 FKVMIHQIHADTRS-----VRRLTTDAATFPENPAN------CAACHDKGQLSLATLGNK 769
Query: 1711 YSLEQWNEMVASKSKECPVCHKTSMESSSSDINKQTFPKTSKTSTSENENHKPSC----- 1765
+ + C CH T+ S+ + +T + +C
Sbjct: 770 PAFLASTGEYSPTVAACASCHATTATDSAVIGHFETNGGVYNAAAGTYTPGSETCATCHG 829
Query: 1766 -GNSFMVHKNQPI 1777
G SF V K P+
Sbjct: 830 EGKSFGVDKVHPV 842
>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers,
4-stranded parallel/anti-parallel beta- sheet,
structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1
g.37.1.1
Length = 102
Score = 37.8 bits (87), Expect = 0.005
Identities = 20/84 (23%), Positives = 28/84 (33%), Gaps = 4/84 (4%)
Query: 413 HASRHKNYAHSRDRQKMECDYCKRKFTCKRYLAEHIN-AHTG---NTIYGCRICKKTFLY 468
H H N + + EC YC + H++ H N+ Y C C
Sbjct: 3 HHHHHHNQQNKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKR 62
Query: 469 TNGLRRHILSRHKDTDVVILNEVK 492
+ L H L H + L VK
Sbjct: 63 YDALSEHNLKYHPGEENFKLTMVK 86
Score = 35.5 bits (81), Expect = 0.028
Identities = 18/87 (20%), Positives = 31/87 (35%), Gaps = 3/87 (3%)
Query: 853 SMRKHLREVHSSQKKYVCDMCGKQFTSNNRVSQHKAYSHFGIIKTIERKFECDYCKMKFK 912
H ++ + Y C C Q N + H H ++ + C C K
Sbjct: 4 HHHHHNQQNKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVL--NSSYVCVECNFLTK 61
Query: 913 SKSFLSEHI-NTHTGNKPYQCQICKKS 938
LSEH H G + ++ + K++
Sbjct: 62 RYDALSEHNLKYHPGEENFKLTMVKRN 88
Score = 34.7 bits (79), Expect = 0.054
Identities = 14/79 (17%), Positives = 23/79 (29%), Gaps = 6/79 (7%)
Query: 1005 NLQKHMLSHTGEKPFCCHIC--GKSLKGNLKDHILKCHTGER---PYKCDVCGSSFKDKW 1059
+ + + E + C C H+ H Y C C K
Sbjct: 5 HHHHNQQNKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYD 64
Query: 1060 YLGVH-MRKHNGEKPYNCD 1077
L H ++ H GE+ +
Sbjct: 65 ALSEHNLKYHPGEENFKLT 83
Score = 34.4 bits (78), Expect = 0.065
Identities = 20/87 (22%), Positives = 31/87 (35%), Gaps = 3/87 (3%)
Query: 1313 RRHLRQVHTSQKRYLCDICGKQFTSTNRVNIHKACVHS--STGNKFECIYCKKKYRRKFD 1370
H +Q + Y C C Q N H H + + C+ C +R
Sbjct: 6 HHHNQQNKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDA 65
Query: 1371 LKEHINK-HTGNKPYHCQICKESFYTL 1396
L EH K H G + + + K + T+
Sbjct: 66 LSEHNLKYHPGEENFKLTMVKRNNQTI 92
Score = 34.0 bits (77), Expect = 0.11
Identities = 11/64 (17%), Positives = 20/64 (31%)
Query: 119 RRHMRVKHPGEQNLPCRLCDMSFSNKYQKKKHYSAFHKGMPFIPSFTCPICQKIFKNKEW 178
H + E C+ C + H + H + S+ C C + K +
Sbjct: 6 HHHNQQNKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDA 65
Query: 179 YLDH 182
+H
Sbjct: 66 LSEH 69
Score = 33.6 bits (76), Expect = 0.12
Identities = 15/71 (21%), Positives = 25/71 (35%), Gaps = 4/71 (5%)
Query: 1495 HKAHSHFGIIKTIQRKFECDFCKKKFYRNFDLQEHINT-HTG---NKPYQCQICNKSFGT 1550
H H H K ++ +EC +C + H+++ H N Y C CN
Sbjct: 3 HHHHHHNQQNKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKR 62
Query: 1551 RRNYRLHLKRH 1561
H ++
Sbjct: 63 YDALSEHNLKY 73
Score = 32.1 bits (72), Expect = 0.39
Identities = 13/64 (20%), Positives = 22/64 (34%), Gaps = 2/64 (3%)
Query: 744 ERKKSKDSFHCDTCGKYFRSRQICNKHIKRVHLNPTK--TFKCDLCSDRFSTSAKLKKHV 801
+ KK + + C C + H+ H N ++ C C+ L +H
Sbjct: 11 QNKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHN 70
Query: 802 DKIH 805
K H
Sbjct: 71 LKYH 74
Score = 30.9 bits (69), Expect = 0.95
Identities = 17/77 (22%), Positives = 25/77 (32%), Gaps = 8/77 (10%)
Query: 982 KHMNWVHGDKCHICKVC--GAKIKGNLQKHMLS-HTG---EKPFCCHICGKSLK--GNLK 1033
+ + + CK C H+ S H + C C K L
Sbjct: 8 HNQQNKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALS 67
Query: 1034 DHILKCHTGERPYKCDV 1050
+H LK H GE +K +
Sbjct: 68 EHNLKYHPGEENFKLTM 84
Score = 30.9 bits (69), Expect = 1.2
Identities = 15/82 (18%), Positives = 26/82 (31%), Gaps = 3/82 (3%)
Query: 1463 QMRIHLREAHSQKKYACDVCGKQFTSTNRVSQHKAHSHFGIIKTIQRKFECDFCKKKFYR 1522
+ + + Y C C Q N + H H ++ + C C R
Sbjct: 5 HHHHNQQNKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVL--NSSYVCVECNFLTKR 62
Query: 1523 NFDLQEHI-NTHTGNKPYQCQI 1543
L EH H G + ++ +
Sbjct: 63 YDALSEHNLKYHPGEENFKLTM 84
Score = 30.5 bits (68), Expect = 1.6
Identities = 12/57 (21%), Positives = 20/57 (35%), Gaps = 3/57 (5%)
Query: 104 TCRICTEVFENLTLLRRHMRVKHPGEQNLP---CRLCDMSFSNKYQKKKHYSAFHKG 157
C+ CT +L + H+ +HP C C+ +H +H G
Sbjct: 20 ECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPG 76
Score = 30.1 bits (67), Expect = 2.1
Identities = 14/64 (21%), Positives = 20/64 (31%), Gaps = 4/64 (6%)
Query: 678 SRHLKIHEYNESKMYKCPVCSKMFTELYEMKRHRDHKHGG----KCHVCKICGATIKLFT 733
H Y+C C+ +L H D +H +VC C K +
Sbjct: 5 HHHHNQQNKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYD 64
Query: 734 ELEE 737
L E
Sbjct: 65 ALSE 68
Score = 30.1 bits (67), Expect = 2.2
Identities = 10/59 (16%), Positives = 21/59 (35%), Gaps = 1/59 (1%)
Query: 284 KMFKCDICVASFLTPHKLKTHIKTKHRTQLKELYTFECQHCEDKFSTPFELNKHNESKH 342
++C C + H+ ++H + ++ C C L++HN H
Sbjct: 17 GGYECKYCTFQTPDLNMFTFHVDSEH-PNVVLNSSYVCVECNFLTKRYDALSEHNLKYH 74
Score = 30.1 bits (67), Expect = 2.3
Identities = 14/71 (19%), Positives = 26/71 (36%), Gaps = 4/71 (5%)
Query: 886 HKAYSHFGIIKTIERKFECDYCKMKFKSKSFLSEHINT-HTG---NKPYQCQICKKSFAN 941
H + H K +E +EC YC + + + H+++ H N Y C C
Sbjct: 3 HHHHHHNQQNKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKR 62
Query: 942 KRSYQRDLKRH 952
+ ++
Sbjct: 63 YDALSEHNLKY 73
Score = 29.7 bits (66), Expect = 2.8
Identities = 12/56 (21%), Positives = 17/56 (30%), Gaps = 3/56 (5%)
Query: 841 CPVCHKTYSTPKSMRKHLREVHSSQKK---YVCDMCGKQFTSNNRVSQHKAYSHFG 893
C C H+ H + YVC C + +S+H H G
Sbjct: 21 CKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPG 76
Score = 29.7 bits (66), Expect = 2.8
Identities = 13/71 (18%), Positives = 20/71 (28%), Gaps = 4/71 (5%)
Query: 1031 NLKDHILKCHTGERPYKCDVCGSSFKDKWYLGVHMR-KHNG---EKPYNCDYCGQTFAAR 1086
+ H + E Y+C C D H+ +H Y C C
Sbjct: 4 HHHHHNQQNKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRY 63
Query: 1087 STFTFHLKKHE 1097
+ H K+
Sbjct: 64 DALSEHNLKYH 74
Score = 29.0 bits (64), Expect = 5.0
Identities = 12/61 (19%), Positives = 17/61 (27%), Gaps = 4/61 (6%)
Query: 1446 SGTKKCPVCHKTYSTPRQMRIHLREAHS----QKKYACDVCGKQFTSTNRVSQHKAHSHF 1501
G +C C H+ H Y C C + +S+H H
Sbjct: 16 EGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHP 75
Query: 1502 G 1502
G
Sbjct: 76 G 76
Score = 29.0 bits (64), Expect = 5.4
Identities = 12/61 (19%), Positives = 17/61 (27%), Gaps = 3/61 (4%)
Query: 1793 EKTKLCPVCNKEYATPVTMRKHLREVHVSKKK---FKCDLCQKQFKASRSLQCHKQFVHL 1849
E C C + H+ H + + C C K +L H H
Sbjct: 16 EGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHP 75
Query: 1850 G 1850
G
Sbjct: 76 G 76
Score = 28.2 bits (62), Expect = 9.5
Identities = 12/61 (19%), Positives = 16/61 (26%), Gaps = 2/61 (3%)
Query: 365 VSKSKQCPLCTKIFTTAKHMRVHLRSVHNG--KERKFICDICGKQFTSNIHASRHKNYAH 422
V +C CT H+ S H ++C C S H H
Sbjct: 15 VEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYH 74
Query: 423 S 423
Sbjct: 75 P 75
>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural
genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
g.37.1.1
Length = 96
Score = 37.2 bits (85), Expect = 0.006
Identities = 19/80 (23%), Positives = 34/80 (42%), Gaps = 4/80 (5%)
Query: 1771 VHKNQPIDTGDFSLEQWRQLVAEKTKL-CPVCNK-EYATPVTMRKHLREVHVSKKKFKCD 1828
+ K P+ EQW + +K + CP C T ++KH+ + ++ F C
Sbjct: 9 IRKEPPVYAAGSLEEQWYLEIVDKGSVSCPTCQAVGRKTIEGLKKHME--NCKQEMFTCH 66
Query: 1829 LCQKQFKASRSLQCHKQFVH 1848
C KQ ++ ++ H H
Sbjct: 67 HCGKQLRSLAGMKYHVMANH 86
Score = 34.1 bits (77), Expect = 0.067
Identities = 25/79 (31%), Positives = 37/79 (46%), Gaps = 5/79 (6%)
Query: 1276 EPMDTGDYTLEE--YNKIVASGSKDCPVCHK-TYSTPKTMRRHLRQVHTSQKRYLCDICG 1332
EP +LEE Y +IV GS CP C T + +++H+ + Q+ + C CG
Sbjct: 12 EPPVYAAGSLEEQWYLEIVDKGSVSCPTCQAVGRKTIEGLKKHME--NCKQEMFTCHHCG 69
Query: 1333 KQFTSTNRVNIHKACVHSS 1351
KQ S + H H+S
Sbjct: 70 KQLRSLAGMKYHVMANHNS 88
Score = 32.1 bits (72), Expect = 0.35
Identities = 24/87 (27%), Positives = 36/87 (41%), Gaps = 4/87 (4%)
Query: 1418 STSKFQNKIKKPLDTGDLSWEE--WNELVLSGTKKCPVCHK-TYSTPRQMRIHLREAHSQ 1474
S+ K+P S EE + E+V G+ CP C T ++ H+ E Q
Sbjct: 2 SSGSSGRIRKEPPVYAAGSLEEQWYLEIVDKGSVSCPTCQAVGRKTIEGLKKHM-ENCKQ 60
Query: 1475 KKYACDVCGKQFTSTNRVSQHKAHSHF 1501
+ + C CGKQ S + H +H
Sbjct: 61 EMFTCHHCGKQLRSLAGMKYHVMANHN 87
Score = 31.4 bits (70), Expect = 0.74
Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
Query: 991 KCHICKVCGAKIKGNLQKHMLSHTGEKPFCCHICGKSLK--GNLKDHILKCHT 1041
C C+ G K L+KHM + ++ F CH CGK L+ +K H++ H
Sbjct: 36 SCPTCQAVGRKTIEGLKKHM-ENCKQEMFTCHHCGKQLRSLAGMKYHVMANHN 87
Score = 29.5 bits (65), Expect = 2.8
Identities = 16/62 (25%), Positives = 22/62 (35%), Gaps = 4/62 (6%)
Query: 747 KSKDSFHCDTCGKYFRSRQI-CNKHIKRVHLNPTKTFKCDLCSDRFSTSAKLKKHVDKIH 805
K S C TC R KH++ F C C + + A +K HV H
Sbjct: 30 VDKGSVSCPTCQAVGRKTIEGLKKHMENCKQEM---FTCHHCGKQLRSLAGMKYHVMANH 86
Query: 806 FT 807
+
Sbjct: 87 NS 88
Score = 29.1 bits (64), Expect = 3.9
Identities = 12/48 (25%), Positives = 22/48 (45%), Gaps = 2/48 (4%)
Query: 1975 PFCCDICGKSLKGNLKAHILRCQGERPYKCDVCGSSFKDKKHFSVHIR 2022
P C + K+++G LK H+ C+ + + C CG + H+
Sbjct: 38 PTCQAVGRKTIEG-LKKHMENCK-QEMFTCHHCGKQLRSLAGMKYHVM 83
Score = 29.1 bits (64), Expect = 4.0
Identities = 16/56 (28%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Query: 1948 KCHVCKVCGAKIKGNMKRHMLSHTGEKPFCCDICGKSLK--GNLKAHILRCQGERP 2001
C C+ G K +K+HM + ++ F C CGK L+ +K H++ P
Sbjct: 36 SCPTCQAVGRKTIEGLKKHMENC-KQEMFTCHHCGKQLRSLAGMKYHVMANHNSLP 90
Score = 28.3 bits (62), Expect = 7.1
Identities = 13/56 (23%), Positives = 25/56 (44%), Gaps = 3/56 (5%)
Query: 1018 PFCCHICGKSLKGNLKDHILKCHTGERPYKCDVCGSSFKDKWYLGVHMRKHNGEKP 1073
P C + K+++G LK H+ C + + C CG + + H+ ++ P
Sbjct: 38 PTCQAVGRKTIEG-LKKHMENC--KQEMFTCHHCGKQLRSLAGMKYHVMANHNSLP 90
>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc
finger domain, structural genomics, NPPSFA; NMR {Homo
sapiens} SCOP: g.37.1.1
Length = 45
Score = 34.5 bits (78), Expect = 0.016
Identities = 15/31 (48%), Positives = 20/31 (64%)
Query: 1040 HTGERPYKCDVCGSSFKDKWYLGVHMRKHNG 1070
+GE+PY C VCG FK K + H+R H+G
Sbjct: 5 SSGEKPYSCPVCGLRFKRKDRMSYHVRSHDG 35
Score = 33.0 bits (74), Expect = 0.060
Identities = 15/27 (55%), Positives = 18/27 (66%)
Query: 1998 GERPYKCDVCGSSFKDKKHFSVHIRNH 2024
GE+PY C VCG FK K S H+R+H
Sbjct: 7 GEKPYSCPVCGLRFKRKDRMSYHVRSH 33
Score = 31.8 bits (71), Expect = 0.16
Identities = 12/38 (31%), Positives = 18/38 (47%)
Query: 1533 HTGNKPYQCQICNKSFGTRRNYRLHLKRHKRSAGQLKP 1570
+G KPY C +C F + H++ H S G+ P
Sbjct: 5 SSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKSGP 42
Score = 31.8 bits (71), Expect = 0.16
Identities = 11/30 (36%), Positives = 19/30 (63%)
Query: 1068 HNGEKPYNCDYCGQTFAARSTFTFHLKKHE 1097
+GEKPY+C CG F + ++H++ H+
Sbjct: 5 SSGEKPYSCPVCGLRFKRKDRMSYHVRSHD 34
Score = 29.5 bits (65), Expect = 1.0
Identities = 11/38 (28%), Positives = 16/38 (42%)
Query: 924 HTGNKPYQCQICKKSFANKRSYQRDLKRHKQLAGQLKP 961
+G KPY C +C F K ++ H G+ P
Sbjct: 5 SSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKSGP 42
Score = 28.3 bits (62), Expect = 2.8
Identities = 11/35 (31%), Positives = 18/35 (51%)
Query: 593 HSSIKRYMCDICGKQFTTLSYLDLHRKSHNETVKR 627
S K Y C +CG +F + H +SH+ +V +
Sbjct: 5 SSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGK 39
Score = 27.6 bits (60), Expect = 4.1
Identities = 10/28 (35%), Positives = 17/28 (60%)
Query: 899 ERKFECDYCKMKFKSKSFLSEHINTHTG 926
E+ + C C ++FK K +S H+ +H G
Sbjct: 8 EKPYSCPVCGLRFKRKDRMSYHVRSHDG 35
Score = 26.8 bits (58), Expect = 9.3
Identities = 11/36 (30%), Positives = 18/36 (50%)
Query: 862 HSSQKKYVCDMCGKQFTSNNRVSQHKAYSHFGIIKT 897
S +K Y C +CG +F +R+S H + K+
Sbjct: 5 SSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKS 40
>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 36
Score = 33.7 bits (76), Expect = 0.023
Identities = 15/32 (46%), Positives = 19/32 (59%)
Query: 1041 TGERPYKCDVCGSSFKDKWYLGVHMRKHNGEK 1072
+ +PYKC C + K L VH+RKH GEK
Sbjct: 5 SSGKPYKCPQCSYASAIKANLNVHLRKHTGEK 36
Score = 28.3 bits (62), Expect = 2.4
Identities = 11/29 (37%), Positives = 17/29 (58%)
Query: 2000 RPYKCDVCGSSFKDKKHFSVHIRNHGEDK 2028
+PYKC C + K + +VH+R H +K
Sbjct: 8 KPYKCPQCSYASAIKANLNVHLRKHTGEK 36
Score = 28.3 bits (62), Expect = 2.4
Identities = 14/27 (51%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
Query: 991 KCHICKVCGAKIKGNLQKHMLSHTGEK 1017
KC C A IK NL H+ HTGEK
Sbjct: 11 KCPQCSYASA-IKANLNVHLRKHTGEK 36
Score = 27.5 bits (60), Expect = 3.6
Identities = 12/32 (37%), Positives = 17/32 (53%)
Query: 1351 STGNKFECIYCKKKYRRKFDLKEHINKHTGNK 1382
S+G ++C C K +L H+ KHTG K
Sbjct: 5 SSGKPYKCPQCSYASAIKANLNVHLRKHTGEK 36
Score = 27.5 bits (60), Expect = 4.5
Identities = 10/25 (40%), Positives = 13/25 (52%)
Query: 1072 KPYNCDYCGQTFAARSTFTFHLKKH 1096
KPY C C A ++ HL+KH
Sbjct: 8 KPYKCPQCSYASAIKANLNVHLRKH 32
Score = 27.1 bits (59), Expect = 5.4
Identities = 13/27 (48%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
Query: 1948 KCHVCKVCGAKIKGNMKRHMLSHTGEK 1974
KC C A IK N+ H+ HTGEK
Sbjct: 11 KCPQCSYASA-IKANLNVHLRKHTGEK 36
>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens}
SCOP: g.37.1.1 PDB: 1va2_A
Length = 31
Score = 33.4 bits (77), Expect = 0.025
Identities = 15/31 (48%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
Query: 1509 RKFECDF--CKKKFYRNFDLQEHINTHTGNK 1537
R F C + C K+F R+ +LQ H THTG K
Sbjct: 1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK 31
Score = 29.5 bits (67), Expect = 0.71
Identities = 13/31 (41%), Positives = 14/31 (45%), Gaps = 2/31 (6%)
Query: 1044 RPYKCDV--CGSSFKDKWYLGVHMRKHNGEK 1072
RP+ C CG F L H R H GEK
Sbjct: 1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK 31
>3iyl_X VP3; non-enveloped virus, membrane penetration protein, autocleav
myristol group, icosahedral virus; HET: MYR; 3.30A {Grass
carp reovirus} PDB: 3k1q_C 3k1q_B
Length = 1214
Score = 38.3 bits (88), Expect = 0.033
Identities = 6/34 (17%), Positives = 17/34 (50%)
Query: 1321 TSQKRYLCDICGKQFTSTNRVNIHKACVHSSTGN 1354
+ Y+C++C +F++ + ++ H H +
Sbjct: 112 VNPSSYVCNVCNARFSTMSALSEHLRSDHRDDAS 145
Score = 37.1 bits (85), Expect = 0.076
Identities = 17/117 (14%), Positives = 35/117 (29%), Gaps = 12/117 (10%)
Query: 1732 KTSMESSSSDINKQTFPKTSKTSTSENENHKPSCGNSFMVHKNQPIDTGDFSLEQWRQLV 1791
TS +++D N+Q + S+ N S V N + + +
Sbjct: 36 TTSPNQAAADANQQ---QAGIVSSQSGPNAVGDSAPSSSV-NNDGDIITRPTSDSIAAVA 91
Query: 1792 AEKTKLCPVCNKEYATPVTMRKHLREVHVSKKKFKCDLCQKQFKASRSLQCHKQFVH 1848
V + + + + C++C +F +L H + H
Sbjct: 92 NATKPAAVVSDPQSMKVTPIVNP--------SSYVCNVCNARFSTMSALSEHLRSDH 140
Score = 36.7 bits (84), Expect = 0.10
Identities = 14/56 (25%), Positives = 24/56 (42%), Gaps = 1/56 (1%)
Query: 263 KPFDTIEKCRRHAIRMHMNPCKMFKCDICVASFLTPHKLKTHIKTKHRTQLKELYT 318
KP + + + +NP + C++C A F T L H+++ HR L
Sbjct: 95 KPAAVVSDPQSMKVTPIVNP-SSYVCNVCNARFSTMSALSEHLRSDHRDDASTLLA 149
Score = 36.3 bits (83), Expect = 0.12
Identities = 8/28 (28%), Positives = 16/28 (57%)
Query: 1473 SQKKYACDVCGKQFTSTNRVSQHKAHSH 1500
+ Y C+VC +F++ + +S+H H
Sbjct: 113 NPSSYVCNVCNARFSTMSALSEHLRSDH 140
Score = 35.9 bits (82), Expect = 0.19
Identities = 8/28 (28%), Positives = 17/28 (60%)
Query: 864 SQKKYVCDMCGKQFTSNNRVSQHKAYSH 891
+ YVC++C +F++ + +S+H H
Sbjct: 113 NPSSYVCNVCNARFSTMSALSEHLRSDH 140
Score = 34.8 bits (79), Expect = 0.37
Identities = 13/68 (19%), Positives = 26/68 (38%), Gaps = 4/68 (5%)
Query: 553 DGGLSLEEYQQIVATKSKQCPICEKIFAAPKQMRMHLRHVHSSIKRYMCDICGKQFTTLS 612
DG + +A + + + + S Y+C++C +F+T+S
Sbjct: 75 DGDIITRPTSDSIAAVANATKPAAVVSDPQSMKVTPIVNPSS----YVCNVCNARFSTMS 130
Query: 613 YLDLHRKS 620
L H +S
Sbjct: 131 ALSEHLRS 138
>3k1f_M Transcription initiation factor IIB; RNA polymerase II, TFIIB,
transcription factor, DNA-binding, DNA-directed RNA
polymerase; 4.30A {Saccharomyces cerevisiae}
Length = 197
Score = 36.2 bits (83), Expect = 0.060
Identities = 10/40 (25%), Positives = 15/40 (37%), Gaps = 7/40 (17%)
Query: 687 NESKMYKCPVCSKMFTELYEMKRHRDHKHGGKCHVCKICG 726
N + + CP C ++ E G VC +CG
Sbjct: 17 NLNIVLTCPECKVYPPKIVE-----RFSEGD--VVCALCG 49
Score = 30.8 bits (69), Expect = 2.9
Identities = 13/76 (17%), Positives = 26/76 (34%), Gaps = 18/76 (23%)
Query: 1869 PSKNEVTNHIKSHMGVRDILCPICKKGFIALKHMKTHLKKHMWKAGEIPLEDTYLCDLCS 1928
S ++ ++ + CP CK + + G++ +C LC
Sbjct: 5 ESIDKRAGRRGPNLNIVLT-CPECKVYPPKIVERFSE--------GDV------VCALCG 49
Query: 1929 KVFLEHKDMIRHR-EW 1943
V + ++ R EW
Sbjct: 50 LVLSDK--LVDTRSEW 63
Score = 30.0 bits (67), Expect = 5.7
Identities = 9/39 (23%), Positives = 14/39 (35%), Gaps = 7/39 (17%)
Query: 1445 LSGTKKCPVCHKTYSTPRQMRIHLREAHSQKKYACDVCG 1483
L+ CP C + + E S+ C +CG
Sbjct: 18 LNIVLTCPEC-------KVYPPKIVERFSEGDVVCALCG 49
>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR
{Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A
1are_A
Length = 29
Score = 31.9 bits (73), Expect = 0.080
Identities = 11/29 (37%), Positives = 15/29 (51%)
Query: 1509 RKFECDFCKKKFYRNFDLQEHINTHTGNK 1537
R F C+ C + F R L+ H +HT K
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK 29
Score = 30.4 bits (69), Expect = 0.30
Identities = 11/29 (37%), Positives = 16/29 (55%)
Query: 1044 RPYKCDVCGSSFKDKWYLGVHMRKHNGEK 1072
R + C+VC +F + +L H R H EK
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK 29
Score = 30.4 bits (69), Expect = 0.35
Identities = 11/29 (37%), Positives = 17/29 (58%), Gaps = 6/29 (20%)
Query: 1537 KPYQCQICNKSFGTRRNYRL-HLKRHKRS 1564
+ + C++C ++F R HLKRH RS
Sbjct: 1 RSFVCEVCTRAF-----ARQEHLKRHYRS 24
Score = 30.0 bits (68), Expect = 0.36
Identities = 10/29 (34%), Positives = 17/29 (58%)
Query: 2000 RPYKCDVCGSSFKDKKHFSVHIRNHGEDK 2028
R + C+VC +F ++H H R+H +K
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK 29
Score = 27.7 bits (62), Expect = 2.9
Identities = 10/29 (34%), Positives = 13/29 (44%)
Query: 900 RKFECDYCKMKFKSKSFLSEHINTHTGNK 928
R F C+ C F + L H +HT K
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK 29
Score = 26.9 bits (60), Expect = 5.1
Identities = 10/28 (35%), Positives = 13/28 (46%)
Query: 1355 KFECIYCKKKYRRKFDLKEHINKHTGNK 1382
F C C + + R+ LK H HT K
Sbjct: 2 SFVCEVCTRAFARQEHLKRHYRSHTNEK 29
Score = 26.5 bits (59), Expect = 6.4
Identities = 12/29 (41%), Positives = 16/29 (55%), Gaps = 2/29 (6%)
Query: 1948 KCHVCKVCGAKIK--GNMKRHMLSHTGEK 1974
+ VC+VC ++KRH SHT EK
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK 29
Score = 26.1 bits (58), Expect = 8.5
Identities = 7/22 (31%), Positives = 13/22 (59%)
Query: 1888 LCPICKKGFIALKHMKTHLKKH 1909
+C +C + F +H+K H + H
Sbjct: 4 VCEVCTRAFARQEHLKRHYRSH 25
>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR
{Mus musculus} SCOP: g.37.1.1
Length = 35
Score = 32.0 bits (72), Expect = 0.082
Identities = 12/29 (41%), Positives = 18/29 (62%)
Query: 1533 HTGNKPYQCQICNKSFGTRRNYRLHLKRH 1561
+G +P+ C+IC +F T+ N HLK H
Sbjct: 2 SSGKRPFVCRICLSAFTTKANCARHLKVH 30
Score = 30.1 bits (67), Expect = 0.44
Identities = 10/29 (34%), Positives = 17/29 (58%)
Query: 1040 HTGERPYKCDVCGSSFKDKWYLGVHMRKH 1068
+G+RP+ C +C S+F K H++ H
Sbjct: 2 SSGKRPFVCRICLSAFTTKANCARHLKVH 30
Score = 29.7 bits (66), Expect = 0.58
Identities = 11/29 (37%), Positives = 17/29 (58%)
Query: 924 HTGNKPYQCQICKKSFANKRSYQRDLKRH 952
+G +P+ C+IC +F K + R LK H
Sbjct: 2 SSGKRPFVCRICLSAFTTKANCARHLKVH 30
Score = 29.3 bits (65), Expect = 0.88
Identities = 10/27 (37%), Positives = 18/27 (66%)
Query: 1998 GERPYKCDVCGSSFKDKKHFSVHIRNH 2024
G+RP+ C +C S+F K + + H++ H
Sbjct: 4 GKRPFVCRICLSAFTTKANCARHLKVH 30
Score = 29.3 bits (65), Expect = 0.91
Identities = 9/31 (29%), Positives = 16/31 (51%)
Query: 1068 HNGEKPYNCDYCGQTFAARSTFTFHLKKHEE 1098
+G++P+ C C F ++ HLK H +
Sbjct: 2 SSGKRPFVCRICLSAFTTKANCARHLKVHTD 32
>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC),
C2H2, APO metal-binding, nucleus, phosphoprotein,
transcription, TRAN regulation; 1.80A {Homo sapiens}
Length = 48
Score = 32.1 bits (72), Expect = 0.12
Identities = 14/28 (50%), Positives = 19/28 (67%)
Query: 1473 SQKKYACDVCGKQFTSTNRVSQHKAHSH 1500
K YACD+CGK++ + +S H AHSH
Sbjct: 4 RDKPYACDICGKRYKNRPGLSYHYAHSH 31
Score = 28.6 bits (63), Expect = 2.5
Identities = 12/28 (42%), Positives = 18/28 (64%)
Query: 864 SQKKYVCDMCGKQFTSNNRVSQHKAYSH 891
K Y CD+CGK++ + +S H A+SH
Sbjct: 4 RDKPYACDICGKRYKNRPGLSYHYAHSH 31
>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif,
transcription regulation, zinc-finger; NMR {Saccharomyces
cerevisiae} SCOP: g.37.1.1
Length = 47
Score = 31.8 bits (72), Expect = 0.13
Identities = 12/31 (38%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
Query: 1509 RKFECDF--CKKKFYRNFDLQEHINTHTGNK 1537
+ FEC F C K F R ++++ HI TH ++
Sbjct: 17 KTFECLFPGCTKTFKRRYNIRSHIQTHLEDR 47
Score = 31.0 bits (70), Expect = 0.26
Identities = 9/31 (29%), Positives = 20/31 (64%), Gaps = 2/31 (6%)
Query: 1354 NKFECIY--CKKKYRRKFDLKEHINKHTGNK 1382
FEC++ C K ++R+++++ HI H ++
Sbjct: 17 KTFECLFPGCTKTFKRRYNIRSHIQTHLEDR 47
Score = 27.9 bits (62), Expect = 3.5
Identities = 11/40 (27%), Positives = 19/40 (47%), Gaps = 5/40 (12%)
Query: 1527 QEHINTHTGNKP---YQCQI--CNKSFGTRRNYRLHLKRH 1561
+ I+ + P ++C C K+F R N R H++ H
Sbjct: 4 RGSIDKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTH 43
Score = 27.1 bits (60), Expect = 6.6
Identities = 10/32 (31%), Positives = 17/32 (53%), Gaps = 2/32 (6%)
Query: 899 ERKFECDY--CKMKFKSKSFLSEHINTHTGNK 928
++ FEC + C FK + + HI TH ++
Sbjct: 16 DKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR 47
>3ray_A PR domain-containing protein 11; structural genomics consortium, SGC,
histone methylation, Zn transcriptional regulation,
chromatin, transcription; 1.73A {Homo sapiens}
Length = 237
Score = 35.2 bits (80), Expect = 0.15
Identities = 12/79 (15%), Positives = 23/79 (29%), Gaps = 5/79 (6%)
Query: 1494 QHKAHSHFGIIKTIQRKFE-----CDFCKKKFYRNFDLQEHINTHTGNKPYQCQICNKSF 1548
QH +F + I+ + K+ + H N G K Q + +
Sbjct: 159 QHSERIYFRACRDIRPGEWLRVWYSEDYMKRLHSMSQETIHRNLARGEKRLQREKSEQVL 218
Query: 1549 GTRRNYRLHLKRHKRSAGQ 1567
+ R + G+
Sbjct: 219 DNPEDLRGPIHLSVLRQGK 237
Score = 34.8 bits (79), Expect = 0.24
Identities = 8/61 (13%), Positives = 19/61 (31%)
Query: 624 TVKRKEEDKKYECDSCNKKFWSKRALSEHMIIHTGIKEHQCHVCNTAFYHIRSLSRHLKI 683
++ E + + + K+ S + H + G K Q + L + +
Sbjct: 171 DIRPGEWLRVWYSEDYMKRLHSMSQETIHRNLARGEKRLQREKSEQVLDNPEDLRGPIHL 230
Query: 684 H 684
Sbjct: 231 S 231
Score = 34.4 bits (78), Expect = 0.29
Identities = 17/98 (17%), Positives = 32/98 (32%), Gaps = 6/98 (6%)
Query: 860 EVHSSQKKYVCDMCGKQFTSNNRVSQHKAYSHFGIIKTIERKFE--CDYCK---MKFKSK 914
E ++ +YV ++ N QH +F + I Y + + S
Sbjct: 135 ETKANWMRYVVISREER-EQNLLAFQHSERIYFRACRDIRPGEWLRVWYSEDYMKRLHSM 193
Query: 915 SFLSEHINTHTGNKPYQCQICKKSFANKRSYQRDLKRH 952
S + H N G K Q + ++ N + +
Sbjct: 194 SQETIHRNLARGEKRLQREKSEQVLDNPEDLRGPIHLS 231
>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA
motif, metal binding protein; NMR {Synthetic} SCOP:
g.37.1.3 PDB: 2l1o_A
Length = 39
Score = 30.9 bits (70), Expect = 0.26
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 900 RKFECDYCKMKFKSKSFLSEHINTH 924
R + C +CK +F+S L H+N H
Sbjct: 5 RSYTCSFCKREFRSAQALGGHMNVH 29
Score = 30.9 bits (70), Expect = 0.27
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 1509 RKFECDFCKKKFYRNFDLQEHINTH 1533
R + C FCK++F L H+N H
Sbjct: 5 RSYTCSFCKREFRSAQALGGHMNVH 29
Score = 30.1 bits (68), Expect = 0.45
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 632 KKYECDSCNKKFWSKRALSEHMIIH 656
+ Y C C ++F S +AL HM +H
Sbjct: 5 RSYTCSFCKREFRSAQALGGHMNVH 29
Score = 29.7 bits (67), Expect = 0.60
Identities = 9/22 (40%), Positives = 13/22 (59%)
Query: 430 ECDYCKRKFTCKRYLAEHINAH 451
C +CKR+F + L H+N H
Sbjct: 8 TCSFCKREFRSAQALGGHMNVH 29
Score = 28.2 bits (63), Expect = 2.0
Identities = 11/32 (34%), Positives = 15/32 (46%), Gaps = 1/32 (3%)
Query: 397 RKFICDICGKQFTSNIHASRHKNYAHSRDRQK 428
R + C C ++F S H N H RDR +
Sbjct: 5 RSYTCSFCKREFRSAQALGGHMN-VHRRDRAR 35
Score = 26.6 bits (59), Expect = 8.4
Identities = 8/25 (32%), Positives = 11/25 (44%)
Query: 961 PEDIHECKICHKTFLEKGSLAKHMN 985
P + C C + F +L HMN
Sbjct: 3 PPRSYTCSFCKREFRSAQALGGHMN 27
>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 75
Score = 31.5 bits (71), Expect = 0.33
Identities = 16/68 (23%), Positives = 20/68 (29%), Gaps = 3/68 (4%)
Query: 1962 NMKRHMLSHTGEKPFCCDICGKSLK-GNLKAHILRCQGERPYKCDVCGSSFKDKKHFSVH 2020
H + + C C L LK H C G R C CG + K H
Sbjct: 4 GSSGHEETECPLRLAVCQHCDLELSILKLKEHEDYC-GARTELCGNCGRNVL-VKDLKTH 61
Query: 2021 IRNHGEDK 2028
G +
Sbjct: 62 PEVCGREG 69
Score = 28.4 bits (63), Expect = 4.7
Identities = 13/63 (20%), Positives = 24/63 (38%), Gaps = 1/63 (1%)
Query: 979 SLAKHMNWVHGDKCHICKVCGAKIKGNLQKHMLSHTGEKPFCCHICGKS-LKGNLKDHIL 1037
+ H + +C+ C ++ K + G + C CG++ L +LK H
Sbjct: 4 GSSGHEETECPLRLAVCQHCDLELSILKLKEHEDYCGARTELCGNCGRNVLVKDLKTHPE 63
Query: 1038 KCH 1040
C
Sbjct: 64 VCG 66
Score = 28.0 bits (62), Expect = 6.4
Identities = 15/60 (25%), Positives = 27/60 (45%), Gaps = 7/60 (11%)
Query: 899 ERKFECDYCKMKFKSKSFLSEHINTHTGNKPYQCQICKKSFANKRSYQRDLKRHKQLAGQ 958
R C +C ++ S L EH + + G + C C ++ +DLK H ++ G+
Sbjct: 15 LRLAVCQHCDLEL-SILKLKEHED-YCGARTELCGNCGRNVL-----VKDLKTHPEVCGR 67
>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein;
NMR {Homo sapiens}
Length = 37
Score = 30.0 bits (68), Expect = 0.42
Identities = 9/34 (26%), Positives = 17/34 (50%), Gaps = 2/34 (5%)
Query: 1041 TGERPYKCDV--CGSSFKDKWYLGVHMRKHNGEK 1072
++ + C + CG + +L H+R H GE+
Sbjct: 4 GKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGER 37
Score = 26.9 bits (60), Expect = 6.1
Identities = 8/32 (25%), Positives = 16/32 (50%), Gaps = 2/32 (6%)
Query: 1508 QRKFECDF--CKKKFYRNFDLQEHINTHTGNK 1537
+++ C C K + + L+ H+ HTG +
Sbjct: 6 KKQHICHIQGCGKVYGKTSHLRAHLRWHTGER 37
Score = 26.5 bits (59), Expect = 8.3
Identities = 10/27 (37%), Positives = 16/27 (59%), Gaps = 2/27 (7%)
Query: 597 KRYMCDI--CGKQFTTLSYLDLHRKSH 621
K+++C I CGK + S+L H + H
Sbjct: 7 KQHICHIQGCGKVYGKTSHLRAHLRWH 33
Score = 26.2 bits (58), Expect = 9.9
Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 5/38 (13%)
Query: 1011 LSHTGEKPFCCHI--CGKSLK--GNLKDHILKCHTGER 1044
+ +K CHI CGK +L+ H L+ HTGER
Sbjct: 1 MDPGKKKQHICHIQGCGKVYGKTSHLRAH-LRWHTGER 37
>3cje_A OSMC-like protein; structural genomics, joint center for structural
genomics, J protein structure initiative, PSI-2,
oxidoreductase; HET: MSE; 1.70A {Jannaschia SP}
Length = 167
Score = 33.1 bits (75), Expect = 0.42
Identities = 7/40 (17%), Positives = 13/40 (32%), Gaps = 1/40 (2%)
Query: 1432 TGDLSWEEWNELVLSGTKKCPVCHKTYSTPRQMRIHLREA 1471
E L+ + K C + +T +R L+
Sbjct: 123 HSPDPIEAQQALIEAAKKGCFL-EQTLGQANTIRHRLKVG 161
Score = 31.9 bits (72), Expect = 1.0
Identities = 8/69 (11%), Positives = 20/69 (28%), Gaps = 6/69 (8%)
Query: 1249 SLDLDTSDYSLEENEEWNKITYEVETNEPMDTGDYTLEEYNKIVASGSKDCPVCHKTYST 1308
+ D + ++ +E ++ + K C + +T
Sbjct: 97 RVVWDWAKAGPVYETGPKSFEIDIIL-----HSPDPIEAQQALIEAAKKGCFL-EQTLGQ 150
Query: 1309 PKTMRRHLR 1317
T+R L+
Sbjct: 151 ANTIRHRLK 159
Score = 30.4 bits (68), Expect = 3.3
Identities = 8/38 (21%), Positives = 15/38 (39%), Gaps = 1/38 (2%)
Query: 822 TGDYTLEQWNELVTAQSKDCPVCHKTYSTPKSMRKHLR 859
+E L+ A K C + +T ++R L+
Sbjct: 123 HSPDPIEAQQALIEAAKKGCFL-EQTLGQANTIRHRLK 159
>1wjv_A Cell growth regulating nucleolar protein LYAR; DNA-binding protein,
C2H2 type zinc-finger, structural genomics; NMR {Mus
musculus} SCOP: g.37.1.2 g.37.1.2
Length = 79
Score = 31.4 bits (71), Expect = 0.47
Identities = 12/37 (32%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Query: 1976 FCCDICGKSL-KGNLKAHILRCQGERPYKCDVCGSSF 2011
F C+ CG+S+ K ++ H+ C+ C CG F
Sbjct: 11 FTCNACGESVKKIQVEKHVSNCRNCECLSCIDCGKDF 47
>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc
finger domain, structural genomics, NPPSFA; NMR {Homo
sapiens} SCOP: g.37.1.1
Length = 66
Score = 31.0 bits (69), Expect = 0.53
Identities = 11/22 (50%), Positives = 14/22 (63%)
Query: 1477 YACDVCGKQFTSTNRVSQHKAH 1498
C +CGK FT NR+ QH+A
Sbjct: 14 LPCGLCGKVFTDANRLRQHEAQ 35
>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger,
classical zinc finger, transcription; NMR {Homo sapiens}
Length = 30
Score = 29.7 bits (66), Expect = 0.55
Identities = 13/29 (44%), Positives = 15/29 (51%)
Query: 1044 RPYKCDVCGSSFKDKWYLGVHMRKHNGEK 1072
+PY C C F D L H+R H GEK
Sbjct: 2 KPYVCIHCQRQFADPGALQRHVRIHTGEK 30
Score = 27.4 bits (60), Expect = 3.2
Identities = 10/29 (34%), Positives = 16/29 (55%)
Query: 1509 RKFECDFCKKKFYRNFDLQEHINTHTGNK 1537
+ + C C+++F LQ H+ HTG K
Sbjct: 2 KPYVCIHCQRQFADPGALQRHVRIHTGEK 30
Score = 27.0 bits (59), Expect = 4.5
Identities = 9/29 (31%), Positives = 15/29 (51%)
Query: 900 RKFECDYCKMKFKSKSFLSEHINTHTGNK 928
+ + C +C+ +F L H+ HTG K
Sbjct: 2 KPYVCIHCQRQFADPGALQRHVRIHTGEK 30
Score = 27.0 bits (59), Expect = 5.8
Identities = 13/29 (44%), Positives = 16/29 (55%)
Query: 632 KKYECDSCNKKFWSKRALSEHMIIHTGIK 660
K Y C C ++F AL H+ IHTG K
Sbjct: 2 KPYVCIHCQRQFADPGALQRHVRIHTGEK 30
>1zro_A Erythrocyte binding antigen region II; EBA-175, RII, DBL, invasion,
HOST, malaria, disease, glycophorin, glycan, sialic
acid; HET: SO4; 2.25A {Plasmodium falciparum} SCOP:
a.264.1.1 a.264.1.1 PDB: 1zrl_A*
Length = 602
Score = 34.2 bits (78), Expect = 0.58
Identities = 21/184 (11%), Positives = 49/184 (26%), Gaps = 3/184 (1%)
Query: 620 SHNETVKRKEEDKKYECDSCNKKFWSKRALSEHMIIHTGIKEHQCHVCNTAFYHIRSLSR 679
+N + E++ C + + ++ I
Sbjct: 203 KNNALYEACEKECIDPCMKYRDWIIRSKFEWHTLSKEYETQKVPKENAENYLIKISENKN 262
Query: 680 HLKIHEYNESKMYKCPV-CSKMFTELYEMKRHRDHKHGGKCHVCKICGATIKLFTELEEK 738
K+ + + C T + + K I F +
Sbjct: 263 DAKVSLLLNNCDAEYSKYCDCKHTTTLVKSVLNGNDNTIKEKREHIDLDDFSKFGCDKNS 322
Query: 739 EDSSFERKKSKDSFHCDTCGKY--FRSRQICNKHIKRVHLNPTKTFKCDLCSDRFSTSAK 796
D++ + + K + T R +++C +I R++ K + + S
Sbjct: 323 VDTNTKVWECKKPYKLSTKDVCVPPRRQELCLGNIDRIYDKNLLMIKEHILAIAIYESRI 382
Query: 797 LKKH 800
LK+
Sbjct: 383 LKRK 386
>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger;
NMR {Homo sapiens} SCOP: g.41.3.1
Length = 62
Score = 30.2 bits (68), Expect = 0.71
Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 10/62 (16%)
Query: 688 ESKMYKCPVCSKMFTELYEMKRHRDHKHGGKCHVCKICGATIKLFTELEEKEDSSFERKK 747
+KCPVCS FT+L E + D G C C TE+EE ++S+ +K
Sbjct: 11 NRASFKCPVCSSTFTDL-EANQLFDPMTG--TFRCTFCH------TEVEE-DESAMPKKD 60
Query: 748 SK 749
++
Sbjct: 61 AR 62
>1b8t_A Protein (CRP1); LIM domain, muscle differentiation, contractIle;
NMR {Gallus gallus} SCOP: g.39.1.3 g.39.1.3 g.39.1.3
g.39.1.3 PDB: 1ibi_A 1qli_A 1cxx_A 1ctl_A 2o13_A
Length = 192
Score = 32.7 bits (74), Expect = 0.77
Identities = 23/174 (13%), Positives = 50/174 (28%), Gaps = 21/174 (12%)
Query: 569 SKQCPICEKIFAAPKQMRMHLRHVHSSIKRYMCDICGKQFTTLSYLDLHRKSHNETVKRK 628
K+C +C+K ++++ H S C +C K + +
Sbjct: 7 GKKCGVCQKAVYFAEEVQCEGSSFHKSCFL--CMVCKKNLDSTTV--------------A 50
Query: 629 EEDKKYECDSCNKKFWSKRALSEHMIIHTGIKEHQCHVCNTAFYHIRSLSRHLKIHEYNE 688
+ C SC K + + + M T + + + +
Sbjct: 51 VHGDEIYCKSCYGKKYGPKGKGKGMGAGTLSTDKGESLGIKYEEGQSHRPTNPNASRMAQ 110
Query: 689 SKMY--KCPVCSKMFTELYEMKRHRDHKHGGKCHVCKICGATIKL--FTELEEK 738
CP C + ++ H C C CG +++ + + +
Sbjct: 111 KVGGSDGCPRCGQAVYAAEKVIGAGKSWHKS-CFRCAKCGKSLESTTLADKDGE 163
Score = 29.2 bits (65), Expect = 9.3
Identities = 25/161 (15%), Positives = 41/161 (25%), Gaps = 17/161 (10%)
Query: 902 FECDYCKMKFKSKSFLSEHINTHTGNKPYQCQICKKSFANKRSYQRDLKRHKQLAGQLKP 961
F C CK S + ++ Y C+ C + + + + +
Sbjct: 35 FLCMVCKKNLDSTTVAVHG------DEIY-CKSCYGKKYGPKGKGKGMGAGTLSTDKGES 87
Query: 962 EDIHECKICHKTFLEKGSLAKHMNWVHGDKCHICKVCGAKIKGNLQKHMLSHTGEKP-FC 1020
I + + D C CG + + + K F
Sbjct: 88 LGIKYEEGQSHRPTNPNASRMAQKVGGSDGCP---RCGQAVYAAEKVIGAGKSWHKSCFR 144
Query: 1021 CHICGKSLKGN----LKDHIL--KCHTGERPYKCDVCGSSF 1055
C CGKSL+ I C+ K G
Sbjct: 145 CAKCGKSLESTTLADKDGEIYCKGCYAKNFGPKGFGFGQGA 185
>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR
{Saccharomyces cerevisiae} SCOP: g.37.1.1
Length = 30
Score = 29.1 bits (65), Expect = 0.80
Identities = 8/24 (33%), Positives = 15/24 (62%)
Query: 1651 FKCGICGKCYKTREKCRRHIKRIH 1674
+ CG+C + + R+ RH ++IH
Sbjct: 3 YACGLCNRAFTRRDLLIRHAQKIH 26
>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens}
Length = 46
Score = 29.8 bits (66), Expect = 0.88
Identities = 10/29 (34%), Positives = 14/29 (48%)
Query: 1040 HTGERPYKCDVCGSSFKDKWYLGVHMRKH 1068
E+ +KC+ C +F YL H R H
Sbjct: 7 GQKEKCFKCNKCEKTFSCSKYLTQHERIH 35
Score = 28.3 bits (62), Expect = 2.6
Identities = 9/27 (33%), Positives = 17/27 (62%)
Query: 426 RQKMECDYCKRKFTCKRYLAEHINAHT 452
+ +C+ C++ F+C +YL +H HT
Sbjct: 10 EKCFKCNKCEKTFSCSKYLTQHERIHT 36
Score = 27.9 bits (61), Expect = 3.8
Identities = 12/33 (36%), Positives = 18/33 (54%)
Query: 1819 HVSKKKFKCDLCQKQFKASRSLQCHKQFVHLGV 1851
+K FKC+ C+K F S+ L H++ GV
Sbjct: 7 GQKEKCFKCNKCEKTFSCSKYLTQHERIHTRGV 39
Score = 27.9 bits (61), Expect = 3.9
Identities = 10/28 (35%), Positives = 16/28 (57%)
Query: 1997 QGERPYKCDVCGSSFKDKKHFSVHIRNH 2024
Q E+ +KC+ C +F K+ + H R H
Sbjct: 8 QKEKCFKCNKCEKTFSCSKYLTQHERIH 35
Score = 27.5 bits (60), Expect = 4.5
Identities = 9/29 (31%), Positives = 14/29 (48%)
Query: 1068 HNGEKPYNCDYCGQTFAARSTFTFHLKKH 1096
EK + C+ C +TF+ T H + H
Sbjct: 7 GQKEKCFKCNKCEKTFSCSKYLTQHERIH 35
Score = 27.1 bits (59), Expect = 6.4
Identities = 11/34 (32%), Positives = 15/34 (44%)
Query: 593 HSSIKRYMCDICGKQFTTLSYLDLHRKSHNETVK 626
K + C+ C K F+ YL H + H VK
Sbjct: 7 GQKEKCFKCNKCEKTFSCSKYLTQHERIHTRGVK 40
Score = 27.1 bits (59), Expect = 7.3
Identities = 10/27 (37%), Positives = 17/27 (62%)
Query: 631 DKKYECDSCNKKFWSKRALSEHMIIHT 657
+K ++C+ C K F + L++H IHT
Sbjct: 10 EKCFKCNKCEKTFSCSKYLTQHERIHT 36
>3ung_C CMR2DHD; ferredoxin fold, nucleotide-binding, polymerase, CMR
complex function; HET: ADP; 2.31A {Pyrococcus furiosus}
PDB: 3ur3_C 4doz_A
Length = 693
Score = 33.1 bits (74), Expect = 1.1
Identities = 24/225 (10%), Positives = 60/225 (26%), Gaps = 10/225 (4%)
Query: 299 HKLKTHIKTKHRTQLKELYTFECQHCEDKFSTPFELNKHNESKHEKGRKLNPETGGYTYE 358
+ + +K + ++E +T N ++ K +
Sbjct: 170 SEKDSMLKEAYLKIVREYFTVSITWVSLSEKEDIYQVTENAGLSDEDVKKWLKFAEKKEN 229
Query: 359 EYKEVVVSKSKQCPLCTKIFTTAKHMRVHLRSVHNGKERKFICDICGKQFTSNIHASRHK 418
++ K K K C +CG+ H
Sbjct: 230 SRVLERIAIYPLLVKILDSLGERKVTEERFEKSEQLKGWK--CHVCGENLAIFGDMYDHD 287
Query: 419 NYAHSRDRQKMECDYCKRKFTCKRYLAEHINAHTGNTIYGCRICKKTFLYTNGLRRHILS 478
N ++ C C K ++ G I + LY N +
Sbjct: 288 NLKSLWLDEEPLCPMCLIKRYYPVWIRSKT----GQKIRFESVVDVALLYKNWRKIFDEK 343
Query: 479 RHKDTDVVILNEVKDIFPSHLQSYQIKCRYCARTFSTQNDLKEHV 523
KD ++++ +++ ++ + + + ++ L + +
Sbjct: 344 YGKD----LVSKAREVSEDFVKDNMLVDSDLYYSSTWESGLSKKL 384
Score = 32.4 bits (72), Expect = 2.1
Identities = 27/271 (9%), Positives = 67/271 (24%), Gaps = 19/271 (7%)
Query: 1172 ILSTELQEEQSSLERQNDEDSFKCDIRGKCLKTQEKYNILNVQIYLNPNSKSELSSHGLT 1231
I+S + E+ ++ D R E + + + K
Sbjct: 127 IVSGKEAEKIEEEIKKRIRDFLLQLYREAVDWAVENGVVKVDRSEKDSMLKEAYLKIVRE 186
Query: 1232 TSKNLDKYIDILNSNQESLDLDTSDYSLEENEEWNKITYEVETNEPMDTGDYTLEEYNKI 1291
++ + + + S E+ ++W K + E + ++ +
Sbjct: 187 YFTVSITWVSLSEKEDIYQVTENAGLSDEDVKKWLKFAEKKENSRVLERIAIYPLLVKIL 246
Query: 1292 VASGSKDCPVCHKTYSTPKTMRRHLRQVHTSQKRYLCDICGKQFTSTNRVNIHKACVHSS 1351
+ G + K + K + C +CG+ + H
Sbjct: 247 DSLGER------------KVTEERFEKSE-QLKGWKCHVCGENLAIFGDMYDHDNLKSLW 293
Query: 1352 TGNKFECIYCKKKYRRKFDLKEHINKHTGNKPYHCQICKESFYTLKTYRGDLKRHEQLAE 1411
+ C C K ++ + + L + + +
Sbjct: 294 LDEEPLCPMCLIKRYYPVWIRSKTGQKIRFESVVD------VALLYKNWRKIFDEKYGKD 347
Query: 1412 QSDEMHSTSKFQNKIKKPLDTGDLSWEEWNE 1442
+ S+ K +D+ W
Sbjct: 348 LVSKAREVSEDFVKDNMLVDSDLYYSSTWES 378
>2fiy_A Protein FDHE homolog; FDHE protein, structural genomics, P protein
structure initiative, midwest center for structural
genomics, MCSG; 2.10A {Pseudomonas aeruginosa} SCOP:
e.59.1.1
Length = 309
Score = 32.9 bits (74), Expect = 1.1
Identities = 18/127 (14%), Positives = 31/127 (24%), Gaps = 34/127 (26%)
Query: 1451 CPVCHKTYSTPRQMRIHLREAHSQKKYA-CDVCGKQFTSTNRVSQHKAHSHFGIIKTIQR 1509
CP C S P I + +Y C +C ++ H+
Sbjct: 185 CPACG---SPPMAGMIRQGGKETGLRYLSCSLCACEW-------------HY-------V 221
Query: 1510 KFECDFC---KKKFYRNFDLQEHINTHTGNKPYQCQICNKSFGTRRNYRLHLKRHKRSAG 1566
+ +C C K Y + + + C C Y
Sbjct: 222 RIKCSHCEESKHLAYLSLEHDGQPAEKAVLRAETCPSCQ-------GYLKQFYLEFDRHA 274
Query: 1567 QLKPEDI 1573
+D+
Sbjct: 275 DALADDL 281
Score = 31.7 bits (71), Expect = 2.2
Identities = 14/82 (17%), Positives = 24/82 (29%), Gaps = 19/82 (23%)
Query: 656 HTGIKEHQCHVCNTAFYHIRSLSRHLKIHEYNESKMYKCPVC---SKMFTELYEMKRHRD 712
TG++ C +C ++++R KC C + E
Sbjct: 203 ETGLRYLSCSLCACEWHYVRI----------------KCSHCEESKHLAYLSLEHDGQPA 246
Query: 713 HKHGGKCHVCKICGATIKLFTE 734
K + C C +K F
Sbjct: 247 EKAVLRAETCPSCQGYLKQFYL 268
>4dgw_A PRE-mRNA-splicing factor PRP9; zinc finger; 3.11A {Saccharomyces
cerevisiae}
Length = 402
Score = 32.9 bits (74), Expect = 1.2
Identities = 14/69 (20%), Positives = 26/69 (37%), Gaps = 5/69 (7%)
Query: 1512 ECDFCKKKFYRNFDLQEHINTHTGNKPYQCQICNKSFGTRRNYRLHL--KRHKRSAGQLK 1569
+ K F ++ + K C C++ F T + HL K HK++ + +
Sbjct: 269 VENLIKSDFEHSYCRGS---LRSEAKGIYCPFCSRWFKTSSVFESHLVGKIHKKNESKRR 325
Query: 1570 PEDIHECKI 1578
E K+
Sbjct: 326 NFVYSEYKL 334
Score = 29.8 bits (66), Expect = 9.3
Identities = 16/78 (20%), Positives = 28/78 (35%), Gaps = 14/78 (17%)
Query: 894 IIKTIERKFECDYCKMKFKSKSFLSEHINTHTGNKPYQCQICKKSFANKRSYQRDL--KR 951
+ I+ FE YC+ +S+ K C C + F ++ L K
Sbjct: 269 VENLIKSDFEHSYCRGSLRSE------------AKGIYCPFCSRWFKTSSVFESHLVGKI 316
Query: 952 HKQLAGQLKPEDIHECKI 969
HK+ + + E K+
Sbjct: 317 HKKNESKRRNFVYSEYKL 334
>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha,
coiled coil, cytoplasm, metal- binding, UBL conjugation,
UBL conjugation pathway; 2.20A {Homo sapiens}
Length = 170
Score = 32.0 bits (72), Expect = 1.2
Identities = 18/123 (14%), Positives = 40/123 (32%), Gaps = 12/123 (9%)
Query: 1288 YNKIVASGSKDCPVCHKTYSTPKTM--RRHLRQVHTSQKRYLCDICGKQFTSTNRVNIHK 1345
K + CPV ++ + R++ + + + C + + +
Sbjct: 45 IIKSIRDAGHKCPVDNEILLENQLFPDNFAKREILSLMVKCPNEGCLHKMELRHLEDHQA 104
Query: 1346 ACVHSSTGNKFECIYCKKKYRRKFDLKEHINKHTGNKPYHCQICKESFYTLKTYRGDLKR 1405
C +C C++ +++ + HI K + C C S D +
Sbjct: 105 HCEF----ALMDCPQCQRPFQKF-HINIHILKDCPRRQVSCDNCAASM-----AFEDKEI 154
Query: 1406 HEQ 1408
H+Q
Sbjct: 155 HDQ 157
>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens}
Length = 46
Score = 29.0 bits (64), Expect = 1.3
Identities = 10/34 (29%), Positives = 18/34 (52%)
Query: 630 EDKKYECDSCNKKFWSKRALSEHMIIHTGIKEHQ 663
+K ++C C + F+ +L EH ++H G K
Sbjct: 9 REKSHQCRECGEIFFQYVSLIEHQVLHMGQKNSG 42
Score = 26.7 bits (58), Expect = 9.2
Identities = 10/25 (40%), Positives = 12/25 (48%)
Query: 660 KEHQCHVCNTAFYHIRSLSRHLKIH 684
K HQC C F+ SL H +H
Sbjct: 11 KSHQCRECGEIFFQYVSLIEHQVLH 35
>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 36
Score = 28.7 bits (63), Expect = 1.3
Identities = 12/36 (33%), Positives = 17/36 (47%)
Query: 1502 GIIKTIQRKFECDFCKKKFYRNFDLQEHINTHTGNK 1537
G + + F C++C K F LQ H+ HT K
Sbjct: 1 GSSGSSGKIFTCEYCNKVFKFKHSLQAHLRIHTNEK 36
Score = 28.3 bits (62), Expect = 2.1
Identities = 13/32 (40%), Positives = 18/32 (56%)
Query: 1351 STGNKFECIYCKKKYRRKFDLKEHINKHTGNK 1382
S+G F C YC K ++ K L+ H+ HT K
Sbjct: 5 SSGKIFTCEYCNKVFKFKHSLQAHLRIHTNEK 36
Score = 27.9 bits (61), Expect = 2.6
Identities = 13/36 (36%), Positives = 17/36 (47%)
Query: 893 GIIKTIERKFECDYCKMKFKSKSFLSEHINTHTGNK 928
G + + F C+YC FK K L H+ HT K
Sbjct: 1 GSSGSSGKIFTCEYCNKVFKFKHSLQAHLRIHTNEK 36
>1yoc_A Hypothetical protein PA1835; structural genomics, PSI, protein
structure initiati midwest center for structural
genomics, MCSG, sulfur SAD; 1.70A {Pseudomonas
aeruginosa} SCOP: d.38.1.5
Length = 147
Score = 31.5 bits (71), Expect = 1.3
Identities = 12/60 (20%), Positives = 21/60 (35%), Gaps = 2/60 (3%)
Query: 1849 LGVHKPKFLNMECDYCSRKFPSKNEVTNHIKS-HMGVRDILCPICKKGFIALKHMKTHLK 1907
P+F+ + Y FP + EV NHI + H + G + + +
Sbjct: 29 FASIAPQFVELRPGYAEVTFPKRREVLNHIGTVHAIALCNAAELA-AGTMTDASIPAGHR 87
>3gox_A Restriction endonuclease HPY99I; endonuclease-DNA complex,
restriction enzyme, HPY99I, pseudopalindrome; HET: 1PE;
1.50A {Helicobacter pylori} PDB: 3fc3_A*
Length = 200
Score = 31.8 bits (71), Expect = 1.5
Identities = 20/116 (17%), Positives = 38/116 (32%), Gaps = 4/116 (3%)
Query: 1783 SLEQWRQLVAEKTKLCPVCNKEYATPVTMRKHLREVHVSKKKFKCDLCQKQFKASRSLQC 1842
+++ +R K+C +C+ T + C C+K +
Sbjct: 63 AIDIYRTGKGYDKKICNICHILKNTDGFEINQTDAKGRKTTRPSCRECRKNIDGVKLSST 122
Query: 1843 HKQFVHLGVHKPKFLNMECDYCSRKFPS---KNEVTNHIKSHMGVRDILCPICKKG 1895
K+ + + PK C C ++ N V +H R+ +C C G
Sbjct: 123 EKKKM-DEIAPPKGSVFTCPICEKRSIVGVTANLVHDHNHDTGWGREWICDSCNTG 177
Score = 29.5 bits (65), Expect = 9.8
Identities = 19/114 (16%), Positives = 26/114 (22%), Gaps = 18/114 (15%)
Query: 703 ELYEMKRHRDHKHGGKCHVCKICGATIKLFTELEEKEDSSFERKKSKD------SFHCDT 756
E G +C IC K FE ++ C
Sbjct: 59 SELEAIDIYRTGKGYDKKICNICH---------ILKNTDGFEINQTDAKGRKTTRPSCRE 109
Query: 757 CGKY---FRSRQICNKHIKRVHLNPTKTFKCDLCSDRFSTSAKLKKHVDKIHFT 807
C K + K + + F C +C R D H T
Sbjct: 110 CRKNIDGVKLSSTEKKKMDEIAPPKGSVFTCPICEKRSIVGVTANLVHDHNHDT 163
>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus,
HPV E6 protein, de novo protein; NMR {Synthetic} SCOP:
k.12.1.1 PDB: 1sp1_A 1va3_A
Length = 29
Score = 28.3 bits (63), Expect = 1.6
Identities = 12/28 (42%), Positives = 14/28 (50%)
Query: 1510 KFECDFCKKKFYRNFDLQEHINTHTGNK 1537
KF C C K+F R+ L HI H K
Sbjct: 2 KFACPECPKRFMRSDHLTLHILLHENKK 29
>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 37
Score = 28.6 bits (63), Expect = 1.8
Identities = 13/31 (41%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
Query: 1508 QRKFECDFCKKKFYRN-FDLQEHINTHTGNK 1537
R +C +C F +N DLQ HI H G K
Sbjct: 7 GRAMKCPYCDFYFMKNGSDLQRHIWAHEGVK 37
>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein,
helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis}
SCOP: g.37.1.4 g.37.1.4
Length = 127
Score = 30.7 bits (68), Expect = 2.0
Identities = 13/84 (15%), Positives = 25/84 (29%), Gaps = 1/84 (1%)
Query: 367 KSKQCPLCTKIFTTAKHMRVHLRS-VHNGKERKFICDICGKQFTSNIHASRHKNYAHSRD 425
QC +C+ + + H +S H K R+++ G+ +
Sbjct: 31 SDTQCKVCSAVLISESQKLAHYQSRKHANKVRRYMAINQGEDSVPAKKFKAAPAEISDGE 90
Query: 426 RQKMECDYCKRKFTCKRYLAEHIN 449
+ C C F+ H
Sbjct: 91 DRSKCCPVCNMTFSSPVVAESHYI 114
Score = 29.9 bits (66), Expect = 4.0
Identities = 16/108 (14%), Positives = 29/108 (26%), Gaps = 1/108 (0%)
Query: 1424 NKIKKPLDTGDLSWEEWNELVLSGTKKCPVCHKTYSTPRQMRIHLREAHSQKKYACDVCG 1483
+ + P+ ++ + +C VC + Q H + K +
Sbjct: 8 DALDLPVGKDAVNSLIRENSHIFSDTQCKVCSAVLISESQKLAHYQSRKHANKVRRYMAI 67
Query: 1484 KQFTSTNRVSQHKAHSHFGIIKTIQRKFECDFCKKKFYRNFDLQEHIN 1531
Q + + KA I R C C F + H
Sbjct: 68 NQGEDSVPAKKFKAAP-AEISDGEDRSKCCPVCNMTFSSPVVAESHYI 114
Score = 29.5 bits (65), Expect = 5.0
Identities = 16/115 (13%), Positives = 31/115 (26%), Gaps = 4/115 (3%)
Query: 809 EFQEPSKKNEPLDTGDYTLEQWNELVTAQSKDCPVCHKTYSTPKSMRKHLR-EVHSSQKK 867
EF + P+ C VC + H + H+++ +
Sbjct: 3 EFGNGDALDLPVGKDAVNSLIRENSHIFSDTQCKVCSAVLISESQKLAHYQSRKHANKVR 62
Query: 868 YVCDMCGKQFTSNNRVSQHKAYSHFGIIKTIERKFECDYCKMKFKSKSFLSEHIN 922
+ + + ++ + I +R C C M F S H
Sbjct: 63 RYMAINQGEDSVP---AKKFKAAPAEISDGEDRSKCCPVCNMTFSSPVVAESHYI 114
Score = 29.2 bits (64), Expect = 5.7
Identities = 18/88 (20%), Positives = 29/88 (32%), Gaps = 7/88 (7%)
Query: 568 KSKQCPICEKIFAAPKQMRMHLR-HVH-SSIKRYMCDICGKQFTTLSYLDLHRKSHNETV 625
QC +C + + Q H + H + ++RYM G+ ++
Sbjct: 31 SDTQCKVCSAVLISESQKLAHYQSRKHANKVRRYMAINQGEDSVPAKKFKAAPAEISDG- 89
Query: 626 KRKEEDKKYECDSCNKKFWSKRALSEHM 653
ED+ C CN F S H
Sbjct: 90 ----EDRSKCCPVCNMTFSSPVVAESHY 113
>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Mus musculus}
Length = 35
Score = 28.2 bits (62), Expect = 2.4
Identities = 9/23 (39%), Positives = 17/23 (73%)
Query: 1797 LCPVCNKEYATPVTMRKHLREVH 1819
+C +C K++ + + +R H+REVH
Sbjct: 9 VCALCLKKFVSSIRLRSHIREVH 31
>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger,
transcription; NMR {Homo sapiens}
Length = 29
Score = 27.8 bits (61), Expect = 2.5
Identities = 12/29 (41%), Positives = 18/29 (62%)
Query: 1044 RPYKCDVCGSSFKDKWYLGVHMRKHNGEK 1072
+P +C +CG +F L H+R+H GEK
Sbjct: 1 KPCQCVMCGKAFTQASSLIAHVRQHTGEK 29
>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR
{Saccharomyces cerevisiae} SCOP: g.37.1.1
Length = 32
Score = 27.7 bits (61), Expect = 2.8
Identities = 12/28 (42%), Positives = 14/28 (50%), Gaps = 2/28 (7%)
Query: 1509 RKFECDF--CKKKFYRNFDLQEHINTHT 1534
R + CD C K F RN DL H +H
Sbjct: 2 RPYSCDHPGCDKAFVRNHDLIRHKKSHQ 29
>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus,
HPV E6 protein, de novo protein; NMR {Synthetic} SCOP:
k.12.1.1
Length = 33
Score = 27.6 bits (61), Expect = 3.0
Identities = 11/29 (37%), Positives = 14/29 (48%)
Query: 1510 KFECDFCKKKFYRNFDLQEHINTHTGNKP 1538
KF C C K+F R+ L +HI H
Sbjct: 2 KFACPECPKRFMRSDHLSKHITLHELLGE 30
>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 36
Score = 27.9 bits (61), Expect = 3.1
Identities = 13/25 (52%), Positives = 17/25 (68%)
Query: 863 SSQKKYVCDMCGKQFTSNNRVSQHK 887
SS K ++CDMCGK+F S + HK
Sbjct: 5 SSGKTHLCDMCGKKFKSKGTLKSHK 29
Score = 27.5 bits (60), Expect = 4.1
Identities = 12/30 (40%), Positives = 18/30 (60%)
Query: 594 SSIKRYMCDICGKQFTTLSYLDLHRKSHNE 623
SS K ++CD+CGK+F + L H+ H
Sbjct: 5 SSGKTHLCDMCGKKFKSKGTLKSHKLLHTA 34
Score = 27.1 bits (59), Expect = 5.5
Identities = 12/25 (48%), Positives = 17/25 (68%)
Query: 1321 TSQKRYLCDICGKQFTSTNRVNIHK 1345
+S K +LCD+CGK+F S + HK
Sbjct: 5 SSGKTHLCDMCGKKFKSKGTLKSHK 29
Score = 26.7 bits (58), Expect = 7.1
Identities = 13/27 (48%), Positives = 16/27 (59%)
Query: 631 DKKYECDSCNKKFWSKRALSEHMIIHT 657
K + CD C KKF SK L H ++HT
Sbjct: 7 GKTHLCDMCGKKFKSKGTLKSHKLLHT 33
>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA,
metal-binding, transcription; NMR {Mus musculus}
Length = 28
Score = 27.5 bits (60), Expect = 3.3
Identities = 13/27 (48%), Positives = 14/27 (51%)
Query: 1044 RPYKCDVCGSSFKDKWYLGVHMRKHNG 1070
RPY C VCG F K + H R H G
Sbjct: 2 RPYSCSVCGKRFSLKHQMETHYRVHTG 28
Score = 26.3 bits (57), Expect = 9.8
Identities = 12/25 (48%), Positives = 12/25 (48%)
Query: 2000 RPYKCDVCGSSFKDKKHFSVHIRNH 2024
RPY C VCG F K H R H
Sbjct: 2 RPYSCSVCGKRFSLKHQMETHYRVH 26
>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 36
Score = 27.5 bits (60), Expect = 3.8
Identities = 11/29 (37%), Positives = 18/29 (62%)
Query: 1044 RPYKCDVCGSSFKDKWYLGVHMRKHNGEK 1072
+P+KC +C + + K L HM +H+ EK
Sbjct: 8 KPFKCSLCEYATRSKSNLKAHMNRHSTEK 36
Score = 26.8 bits (58), Expect = 8.3
Identities = 13/32 (40%), Positives = 20/32 (62%)
Query: 1351 STGNKFECIYCKKKYRRKFDLKEHINKHTGNK 1382
S+G F+C C+ R K +LK H+N+H+ K
Sbjct: 5 SSGKPFKCSLCEYATRSKSNLKAHMNRHSTEK 36
>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium
tuberculosis}
Length = 406
Score = 31.0 bits (71), Expect = 4.1
Identities = 8/21 (38%), Positives = 14/21 (66%)
Query: 1777 IDTGDFSLEQWRQLVAEKTKL 1797
I+TG+ QW L+++ T+L
Sbjct: 148 IETGELPTWQWESLISKSTRL 168
>1mty_D Methane monooxygenase hydroxylase; dinuclear iron center
monooxygenase; 1.70A {Methylococcus capsulatus str}
SCOP: a.25.1.2 PDB: 1mmo_D 1xvb_A 1fyz_A 1fz0_A 1fz2_A
1fz3_A 1fz4_A 1fz5_A 1fz6_A 1fz7_A 1fz8_A 1fz9_A 1fzh_A
1fzi_A 1xmf_A 1xmg_A 1xmh_A 1xu3_A 1xu5_A 1fz1_A ...
Length = 512
Score = 31.2 bits (70), Expect = 4.6
Identities = 11/87 (12%), Positives = 26/87 (29%), Gaps = 6/87 (6%)
Query: 325 EDKFSTPFELNKHNESKHEKGRKLNPETGGYTYEEYKEVVVSKSKQCPLCTKIFTTAKHM 384
D + +E ++ + + E + + + Q P C + AK
Sbjct: 366 YDHYGKIYE---EWRARGCEDPSSGFIPLMWFIENNHPIYIDRVSQVPFC---PSLAKGA 419
Query: 385 RVHLRSVHNGKERKFICDICGKQFTSN 411
+NG+ F + + +
Sbjct: 420 STLRVHEYNGEMHTFSDQWGERMWLAE 446
>1twf_A B220, DNA-directed RNA polymerase II largest subunit;
transcription, mRNA, multiprotein complex; HET: UTP;
2.30A {Saccharomyces cerevisiae} SCOP: e.29.1.2 PDB:
1i3q_A 1i6h_A 1k83_A* 1nik_A 1nt9_A 1pqv_A 1r5u_A
1r9s_A* 1r9t_A* 1sfo_A* 1twa_A* 1twc_A* 1i50_A* 1twg_A*
1twh_A* 1wcm_A 1y1v_A 1y1w_A 1y1y_A 1y77_A* ...
Length = 1733
Score = 31.2 bits (70), Expect = 4.9
Identities = 20/170 (11%), Positives = 41/170 (24%), Gaps = 27/170 (15%)
Query: 631 DKKYECDSCNKKFWSKRALSEHM--------IIHTG-------IKEHQCHVCNTAFYHIR 675
D+ +C +C + H + H G + E C C
Sbjct: 62 DRNLKCQTCQEGMNE---CPGHFGHIDLAKPVFHVGFIAKIKKVCECVCMHCGKLLLDEH 118
Query: 676 SLSRHLKIHEYNESKMYK--CPVCSKMFTELYEMKRHRDHKHGGKCHVC-----KICGAT 728
+ + + K + +C ++ D C I
Sbjct: 119 NELMRQALAIKDSKKRFAAIWTLCKTKMVCETDVPSEDDPTQLVSRGGCGNTQPTIRKDG 178
Query: 729 IKLFTELEEKEDSSFERKKSKDSFHCDTCGKYFRSRQICNKHIKRVHLNP 778
+KL ++ + + + F + I K + N
Sbjct: 179 LKLVGSWKKDRATGDADEPELRVLSTEEILNIF--KHISVKDFTSLGFNE 226
>2c9o_A RUVB-like 1; hexameric helicase, AAA+-ATPase, ATP-binding,
chromatin regulator, growth regulation, hydrolase,
nuclear protein, DNA recombination; HET: ADP; 2.2A {Homo
sapiens} PDB: 2xsz_A*
Length = 456
Score = 30.7 bits (69), Expect = 5.2
Identities = 16/50 (32%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
Query: 447 HINAHTGNTIYGCRICKKTFLYTNGLRRHILSRHKDTDVVILNEVKDIFP 496
G+ +Y I KKT + RR I R K+T V EV ++ P
Sbjct: 92 PFCPMVGSEVYSTEI-KKTEVLMENFRRAIGLRIKETKEVYEGEVTELTP 140
>1e7l_A GP49, recombination endonuclease VII; resolvase, holliday junction,
DNAse; HET: SO4; 1.32A {Bacteriophage T4} SCOP:
a.140.4.1 d.4.1.5 PDB: 2qnc_A* 1en7_A 1e7d_A 2qnf_A*
Length = 157
Score = 29.8 bits (66), Expect = 5.8
Identities = 12/40 (30%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Query: 555 GLSLEEYQQIVATKSKQCPICEKIFAAPKQMRMHLRHVHS 594
L EE Q+ ++ +C IC++ Q HL H H
Sbjct: 6 KLYKEEKQKFYDAQNGKCLICQRELNPDVQ-ANHLDHDHE 44
>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI,
protein structure initiative, center for eukaryotic
structural genomics, CESG; NMR {Homo sapiens} SCOP:
g.37.1.4
Length = 124
Score = 29.3 bits (65), Expect = 6.0
Identities = 12/33 (36%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Query: 285 MFKCDICVASFLTPHKLKTHIKTK-HRTQLKEL 316
+ +C C F+ LKTH ++K H+ +LK+L
Sbjct: 50 LHRCLACARYFIDSTNLKTHFRSKDHKKRLKQL 82
Score = 29.3 bits (65), Expect = 6.2
Identities = 12/39 (30%), Positives = 17/39 (43%), Gaps = 2/39 (5%)
Query: 1535 GNKPYQCQICNKSFGTRRNYRLHL--KRHKRSAGQLKPE 1571
G ++C C + F N + H K HK+ QL E
Sbjct: 47 GGGLHRCLACARYFIDSTNLKTHFRSKDHKKRLKQLSVE 85
Score = 28.5 bits (63), Expect = 9.7
Identities = 12/41 (29%), Positives = 13/41 (31%)
Query: 319 FECQHCEDKFSTPFELNKHNESKHEKGRKLNPETGGYTYEE 359
C C F L H SK K R Y+ EE
Sbjct: 51 HRCLACARYFIDSTNLKTHFRSKDHKKRLKQLSVEPYSQEE 91
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation,
transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus}
PDB: 1tbn_A 1tbo_A 2e73_A
Length = 674
Score = 30.4 bits (68), Expect = 7.2
Identities = 30/107 (28%), Positives = 37/107 (34%), Gaps = 31/107 (28%)
Query: 1922 YLCDLCSKVFLEHKDMIRHREWVHGDKCH--VCKVCGAKIKG------NMKRHMLSHTGE 1973
+ C +CS F+ HK +CH V C KG K HT
Sbjct: 66 FQCQVCS--FVVHK------------RCHEFVTFSCPGADKGPASDDPRSKHKFKIHTYS 111
Query: 1974 KPFCCDICGKSLKGNLKAHILRCQGERPYKCDVCGSSFKDKKHFSVH 2020
P CD CG L G L QG KCD C + + +V
Sbjct: 112 SPTFCDHCGSLLYG------LIHQG---MKCDTCMMNVHKRCVMNVP 149
>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding,
structural genomics, NPPSFA; NMR {Homo sapiens}
Length = 43
Score = 26.7 bits (58), Expect = 7.8
Identities = 10/25 (40%), Positives = 12/25 (48%)
Query: 967 CKICHKTFLEKGSLAKHMNWVHGDK 991
C C F E+ SL +H H DK
Sbjct: 13 CNECDCRFSEEASLKRHTLQTHSDK 37
>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger,
transcription; NMR {Homo sapiens}
Length = 26
Score = 26.2 bits (57), Expect = 8.5
Identities = 10/26 (38%), Positives = 15/26 (57%)
Query: 1072 KPYNCDYCGQTFAARSTFTFHLKKHE 1097
KPY C+ CG+ F S H++ H+
Sbjct: 1 KPYVCERCGKRFVQSSQLANHIRHHD 26
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.320 0.133 0.422
Gapped
Lambda K H
0.267 0.0472 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 30,183,787
Number of extensions: 1795389
Number of successful extensions: 15687
Number of sequences better than 10.0: 1
Number of HSP's gapped: 13035
Number of HSP's successfully gapped: 3975
Length of query: 2028
Length of database: 6,701,793
Length adjustment: 108
Effective length of query: 1920
Effective length of database: 3,686,325
Effective search space: 7077744000
Effective search space used: 7077744000
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 65 (29.4 bits)