BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy4687
(339 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q17FR9|SRRT_AEDAE Serrate RNA effector molecule homolog OS=Aedes aegypti GN=Ars2 PE=3
SV=1
Length = 937
Score = 452 bits (1162), Expect = e-126, Method: Compositional matrix adjust.
Identities = 222/330 (67%), Positives = 260/330 (78%), Gaps = 18/330 (5%)
Query: 28 PRALHRTSSIFLRNLAPTITKAEVENLCKRYSGFLRVAIADPQPDRRWFRRGWVTFRRDV 87
PRALHRTSSIFLRNLAP+ITKAEVE +CKRY+GFLRVAIADP +RRWFRRGWVTFRRDV
Sbjct: 508 PRALHRTSSIFLRNLAPSITKAEVEAMCKRYNGFLRVAIADPLLERRWFRRGWVTFRRDV 567
Query: 88 DIKEICWNLNNIRLRDCELGAIVNRDLSRRVRTVSGLTSLKPVVQFDMKL---------- 137
+IKEICWNLNNIRLRDCELGAIVN+DLSRRVR V+GLT K +V+ D+KL
Sbjct: 568 NIKEICWNLNNIRLRDCELGAIVNKDLSRRVRPVNGLTCHKTIVRSDIKLCAKIAHNLDD 627
Query: 138 --SLWTDGQEPAQQ-PMSYTLSSKNPVLQNITDYLIEEASAEEEELLGKSEE-----NTE 189
LW + ++ ++ S+ L SKNPVLQNITDYLIEEASAEE+ELLG S E N
Sbjct: 628 KVGLWKEQEDNGEKNGESFGLQSKNPVLQNITDYLIEEASAEEDELLGLSTEAAKKSNDG 687
Query: 190 ETEQVDPNVLRVLDRLILYLRIVHSVDYYNHCEYPNEDEMPNRCGIIHTRGSAPASKVTP 249
E + D ++ VLD+LILYLR+VHS+D+YNHCEYP EDEMPNRCGIIH RG P +KVT
Sbjct: 688 ELVERDTQLIEVLDKLILYLRVVHSIDFYNHCEYPYEDEMPNRCGIIHARGPPPQNKVTS 747
Query: 250 QEITDYCSTFQNKMSSLVSSPQEPTPEELDQLGAKKTDAEVEKFIAANTQEISTDKWLCP 309
EI +Y TF+ KM S ++ + EE+ +LGAK +AEVEKFI ANTQE++ DKWLCP
Sbjct: 748 NEIQEYIRTFEGKMGSFLARAVDLEEEEMKKLGAKDAEAEVEKFIQANTQELAKDKWLCP 807
Query: 310 LSGKKFKGPDFIRKHIFNKHAEKVEEVKKE 339
LSGKKFKGPDF+RKHIFNKH EKV+EV+KE
Sbjct: 808 LSGKKFKGPDFVRKHIFNKHNEKVDEVRKE 837
>sp|B4NYV0|SRRT_DROYA Serrate RNA effector molecule homolog OS=Drosophila yakuba GN=Ars2
PE=3 SV=1
Length = 944
Score = 421 bits (1081), Expect = e-117, Method: Compositional matrix adjust.
Identities = 210/339 (61%), Positives = 254/339 (74%), Gaps = 28/339 (8%)
Query: 28 PRALHRTSSIFLRNLAPTITKAEVENLCKRYSGFLRVAIADPQPDRRWFRRGWVTFRRDV 87
PRALHRTSSIFLRNLAP+IT+AE+E +C R++G+LRVAIADP +RRW+RRGW+TF RDV
Sbjct: 509 PRALHRTSSIFLRNLAPSITRAEIEAVCNRFTGYLRVAIADPLVERRWYRRGWITFMRDV 568
Query: 88 DIKEICWNLNNIRLRDCELGAIVNRDLSRRVRTVSGLTSLKPVVQFDMKL---------- 137
+IKEICW LNN RLRDCE+GAIVNRDLSRRVR +GLT+ K VV+ D+KL
Sbjct: 569 NIKEICWGLNNQRLRDCEMGAIVNRDLSRRVRPANGLTAHKQVVRSDIKLCAKIALNLDE 628
Query: 138 --SLW----TDGQEPAQQPMS--------YTLSSKNPVLQNITDYLIEEASAEEEELLGK 183
LW TD A+ S Y +SKNPVLQNITDYLIEEASAEE+ELLG
Sbjct: 629 RFRLWAEVPTDDSNSARADESSENGSGSTYGFNSKNPVLQNITDYLIEEASAEEDELLGL 688
Query: 184 SEENTE---ETEQVDPNVLRVLDRLILYLRIVHSVDYYNHCEYPNEDEMPNRCGIIHTRG 240
+ EN + E + D ++ VLDRL+LYLRIVHSVDYYNHCEYP EDEMPNRCGIIH RG
Sbjct: 689 TGENKDTEGEAIERDEQLISVLDRLVLYLRIVHSVDYYNHCEYPYEDEMPNRCGIIHARG 748
Query: 241 SAPASKVTPQEITDYCSTFQNKMSSLVSSPQEPTPEELDQLGAKKTDAEVEKFIAANTQE 300
AP +VT ++ +Y T+++K+ ++ + EE+ LGAK + EVEKF+ ANTQE
Sbjct: 749 PAPV-RVTNNDVQEYIKTYESKLQQFLTKTVLLSDEEIKDLGAKDAETEVEKFVQANTQE 807
Query: 301 ISTDKWLCPLSGKKFKGPDFIRKHIFNKHAEKVEEVKKE 339
++ DKWLCPLSGKKFKGP+FIRKHIFNKH EKV+EV+KE
Sbjct: 808 LAKDKWLCPLSGKKFKGPEFIRKHIFNKHDEKVDEVRKE 846
>sp|Q5TUF1|SRRT_ANOGA Serrate RNA effector molecule homolog OS=Anopheles gambiae GN=Ars2
PE=3 SV=3
Length = 967
Score = 417 bits (1073), Expect = e-116, Method: Compositional matrix adjust.
Identities = 223/341 (65%), Positives = 260/341 (76%), Gaps = 30/341 (8%)
Query: 29 RALHRTSSIFLRNLAPTITKAEVENLCKRYSGFLRVAIADPQPDRRWFRRGWVTFRRDVD 88
RALHRTSSIFLRNLAP+ITKAEVE +C+RY+GFLRVAIADP +RRWFRRGWVTF+R+V+
Sbjct: 518 RALHRTSSIFLRNLAPSITKAEVEAMCRRYNGFLRVAIADPLLERRWFRRGWVTFKREVN 577
Query: 89 IKEICWNLNNIRLRDCELGAIVNRDLSRRVRTVSGLTSLKPVVQFDMKLS---------- 138
IKEICWNLNNIRLRDCELGAIVN+DLSRRVR V+G+T K VV+ D+KL
Sbjct: 578 IKEICWNLNNIRLRDCELGAIVNKDLSRRVRPVNGITCHKTVVRSDIKLGAKIAHNLDDK 637
Query: 139 --LWTDGQEPA--------------QQPMSYTLSSKNPVLQNITDYLIEEASAEEEELLG 182
LW + A Q S+ L SKNPVLQNITDYLIEEASAEEEELLG
Sbjct: 638 WGLWKETPTAASGTGEAGDKNGSEVQPEESFGLQSKNPVLQNITDYLIEEASAEEEELLG 697
Query: 183 KSEENTEETE----QVDPNVLRVLDRLILYLRIVHSVDYYNHCEYPNEDEMPNRCGIIHT 238
SE++ + +E + DP ++ VLDRLILYLRIVHSVD+YNHCEYP EDEMPNRCGIIH
Sbjct: 698 LSEDSKKVSEGELIERDPQLIEVLDRLILYLRIVHSVDFYNHCEYPYEDEMPNRCGIIHA 757
Query: 239 RGSAPASKVTPQEITDYCSTFQNKMSSLVSSPQEPTPEELDQLGAKKTDAEVEKFIAANT 298
RG SKV EI +Y TF+ KM+S ++ + ++ +LGAK +AEVEKFI ANT
Sbjct: 758 RGPPSQSKVMSNEIQEYIRTFEGKMASFLTRMVDIDETDMKKLGAKDAEAEVEKFITANT 817
Query: 299 QEISTDKWLCPLSGKKFKGPDFIRKHIFNKHAEKVEEVKKE 339
QE++ DKWLCPLSGKKFKGPDF+RKHIFNKHAEKVEEV+KE
Sbjct: 818 QELAKDKWLCPLSGKKFKGPDFVRKHIFNKHAEKVEEVRKE 858
>sp|B4LIK8|SRRT_DROVI Serrate RNA effector molecule homolog OS=Drosophila virilis GN=Ars2
PE=3 SV=1
Length = 963
Score = 408 bits (1049), Expect = e-113, Method: Compositional matrix adjust.
Identities = 209/350 (59%), Positives = 258/350 (73%), Gaps = 34/350 (9%)
Query: 23 KNEPPPRALHRTSSIFLRNLAPTITKAEVENLCKRYSGFLRVAIADPQPDRRWFRRGWVT 82
K+ P PRALHRTSSIFLRNLAP+ITKAE+E +C R+SG+LRVAIADP +RRW+RRGW+T
Sbjct: 517 KDGPQPRALHRTSSIFLRNLAPSITKAEIEAICTRFSGYLRVAIADPLVERRWYRRGWIT 576
Query: 83 FRRDVDIKEICWNLNNIRLRDCELGAIVNRDLSRRVRTVSGLTSLKPVVQFDMKL----- 137
F RDV+IKEICW+LNN RLRDCE+GAIVNRDLSRRVR +G+T+ K +V+ D+KL
Sbjct: 577 FTRDVNIKEICWSLNNQRLRDCEMGAIVNRDLSRRVRPANGITAHKQIVRADIKLCAKIA 636
Query: 138 -------SLWTDGQEPAQQP------------------MSYTLSSKNPVLQNITDYLIEE 172
LW++ QQP +Y +SKNPVLQNITDYLIEE
Sbjct: 637 MNLDERFKLWSEADSTQQQPDAESKPSADATNGSGGSSTTYGFNSKNPVLQNITDYLIEE 696
Query: 173 ASAEEEELLGKSEENTE-ETEQV--DPNVLRVLDRLILYLRIVHSVDYYNHCEYPNEDEM 229
ASAEEEELLG + +N + E E + D ++ VLDRL+LYLRIVHSVDYYNHCEYP EDEM
Sbjct: 697 ASAEEEELLGLAGDNKDGEGEPIERDEQLISVLDRLVLYLRIVHSVDYYNHCEYPYEDEM 756
Query: 230 PNRCGIIHTRGSAPASKVTPQEITDYCSTFQNKMSSLVSSPQEPTPEELDQLGAKKTDAE 289
PNRCGIIH RG P +VT ++ +Y + K+ ++ + + +E+ +LGAK + E
Sbjct: 757 PNRCGIIHARGPPPM-RVTSNDVQEYIKAYDGKLQQFLTKSVQLSDDEIKELGAKNPETE 815
Query: 290 VEKFIAANTQEISTDKWLCPLSGKKFKGPDFIRKHIFNKHAEKVEEVKKE 339
VEKF+ ANTQE++ DKWLCPLSGKKFKGP+FIRKHIFNKH EKV+EV+KE
Sbjct: 816 VEKFVQANTQELAKDKWLCPLSGKKFKGPEFIRKHIFNKHEEKVDEVRKE 865
>sp|Q28WQ8|SRRT_DROPS Serrate RNA effector molecule homolog OS=Drosophila pseudoobscura
pseudoobscura GN=Ars2 PE=3 SV=2
Length = 951
Score = 407 bits (1047), Expect = e-113, Method: Compositional matrix adjust.
Identities = 213/343 (62%), Positives = 257/343 (74%), Gaps = 33/343 (9%)
Query: 27 PPRALHRTSSIFLRNLAPTITKAEVENLCKRYSGFLRVAIADPQPDRRWFRRGWVTFRRD 86
PPRA+HRTSSIFLRNLAP+ITKAE+E LC R+SG+LR AIADP +RRW+RRGW+TF RD
Sbjct: 515 PPRAMHRTSSIFLRNLAPSITKAEIEALCSRFSGYLRTAIADPLVERRWYRRGWITFTRD 574
Query: 87 VDIKEICWNLNNIRLRDCELGAIVNRDLSRRVRTVSGLTSLKPVVQFDMKL--------- 137
V+IKEICW+LNN RLRDCE+GAIVNRDLSRRVR +G+T+ K VV+ D+KL
Sbjct: 575 VNIKEICWSLNNQRLRDCEMGAIVNRDLSRRVRPANGITAHKQVVRSDIKLCARIVMNLD 634
Query: 138 ---SLWTDGQEPAQQP---------------MSYTLSSKNPVLQNITDYLIEEASAEEEE 179
LW++G P +P SY +SKNPVLQNITDYLIEEASAEEEE
Sbjct: 635 EKFKLWSEG--PLSKPSPASDSEATAANGSGSSYGFNSKNPVLQNITDYLIEEASAEEEE 692
Query: 180 LLGKSEENTE-ETEQV--DPNVLRVLDRLILYLRIVHSVDYYNHCEYPNEDEMPNRCGII 236
LLG S + + E E + D +L VLDRL+LYLRIVHSVDYYNHCEYP EDEMPNRCGII
Sbjct: 693 LLGLSGDRKDGEGEPIERDEQLLSVLDRLVLYLRIVHSVDYYNHCEYPYEDEMPNRCGII 752
Query: 237 HTRGSAPASKVTPQEITDYCSTFQNKMSSLVSSPQEPTPEELDQLGAKKTDAEVEKFIAA 296
H RG AP S+VT E+ +Y +++ K+ ++ + +++ LGAK D EVEKF+ A
Sbjct: 753 HARGPAP-SRVTSNELNEYIKSYEGKLLQFLTKTALLSEDQIKDLGAKNADTEVEKFVQA 811
Query: 297 NTQEISTDKWLCPLSGKKFKGPDFIRKHIFNKHAEKVEEVKKE 339
NTQE++ DKWLCPLSGKKFKGP+FIRKHIFNKH EKV+EV+KE
Sbjct: 812 NTQELAKDKWLCPLSGKKFKGPEFIRKHIFNKHEEKVDEVRKE 854
>sp|B4H732|SRRT_DROPE Serrate RNA effector molecule homolog OS=Drosophila persimilis
GN=Ars2 PE=3 SV=1
Length = 951
Score = 405 bits (1042), Expect = e-112, Method: Compositional matrix adjust.
Identities = 212/343 (61%), Positives = 256/343 (74%), Gaps = 33/343 (9%)
Query: 27 PPRALHRTSSIFLRNLAPTITKAEVENLCKRYSGFLRVAIADPQPDRRWFRRGWVTFRRD 86
PPR +HRTSSIFLRNLAP+ITKAE+E LC R+SG+LR AIADP +RRW+RRGW+TF RD
Sbjct: 515 PPRDMHRTSSIFLRNLAPSITKAEIEALCSRFSGYLRTAIADPLVERRWYRRGWITFTRD 574
Query: 87 VDIKEICWNLNNIRLRDCELGAIVNRDLSRRVRTVSGLTSLKPVVQFDMKL--------- 137
V+IKEICW+LNN RLRDCE+GAIVNRDLSRRVR +G+T+ K VV+ D+KL
Sbjct: 575 VNIKEICWSLNNQRLRDCEMGAIVNRDLSRRVRPANGITAHKQVVRSDIKLCARIVMNLD 634
Query: 138 ---SLWTDGQEPAQQP---------------MSYTLSSKNPVLQNITDYLIEEASAEEEE 179
LW++G P +P SY +SKNPVLQNITDYLIEEASAEEEE
Sbjct: 635 EKFKLWSEG--PLSKPSPASDSEATAANGSGSSYGFNSKNPVLQNITDYLIEEASAEEEE 692
Query: 180 LLGKSEENTE-ETEQV--DPNVLRVLDRLILYLRIVHSVDYYNHCEYPNEDEMPNRCGII 236
LLG S + + E E + D +L VLDRL+LYLRIVHSVDYYNHCEYP EDEMPNRCGII
Sbjct: 693 LLGLSGDRKDGEGEPIERDEQLLSVLDRLVLYLRIVHSVDYYNHCEYPYEDEMPNRCGII 752
Query: 237 HTRGSAPASKVTPQEITDYCSTFQNKMSSLVSSPQEPTPEELDQLGAKKTDAEVEKFIAA 296
H RG AP S+VT E+ +Y +++ K+ ++ + +++ LGAK D EVEKF+ A
Sbjct: 753 HARGPAP-SRVTSNELNEYIKSYEGKLLQFLTKTALLSEDQIKDLGAKNADTEVEKFVQA 811
Query: 297 NTQEISTDKWLCPLSGKKFKGPDFIRKHIFNKHAEKVEEVKKE 339
NTQE++ DKWLCPLSGKKFKGP+FIRKHIFNKH EKV+EV+KE
Sbjct: 812 NTQELAKDKWLCPLSGKKFKGPEFIRKHIFNKHEEKVDEVRKE 854
>sp|B3MJ69|SRRT_DROAN Serrate RNA effector molecule homolog OS=Drosophila ananassae
GN=Ars2 PE=3 SV=1
Length = 948
Score = 405 bits (1041), Expect = e-112, Method: Compositional matrix adjust.
Identities = 215/340 (63%), Positives = 257/340 (75%), Gaps = 29/340 (8%)
Query: 28 PRALHRTSSIFLRNLAPTITKAEVENLCKRYSGFLRVAIADPQPDRRWFRRGWVTFRRDV 87
PRALHRTSSIFLRNLAP+ITKAE+E +C R+SG+LRVAIADP +RRW+RRGW+TF RDV
Sbjct: 512 PRALHRTSSIFLRNLAPSITKAEIEAVCTRFSGYLRVAIADPLVERRWYRRGWITFTRDV 571
Query: 88 DIKEICWNLNNIRLRDCELGAIVNRDLSRRVRTVSGLTSLKPVVQFDMKL---------- 137
+IKEICW+LNN RLRDCE+GAIVNRDLSRRVR +G+T+ K VV+ D+KL
Sbjct: 572 NIKEICWSLNNQRLRDCEMGAIVNRDLSRRVRPANGITAHKQVVRSDIKLCAKIILNLDE 631
Query: 138 --SLWTD------------GQEPAQQPMS-YTLSSKNPVLQNITDYLIEEASAEEEELLG 182
LW + G+ A S Y + SKNPVLQNITDYLIEEASAEEEELLG
Sbjct: 632 RFRLWPEPTSDDSIPFDRAGESSANGNTSTYGIKSKNPVLQNITDYLIEEASAEEEELLG 691
Query: 183 KSEENTE-ETEQV--DPNVLRVLDRLILYLRIVHSVDYYNHCEYPNEDEMPNRCGIIHTR 239
+ EN + E E + D ++L VLDRL+LYLRIVHSVDYYNHCEYP EDEMPNRCGIIH R
Sbjct: 692 LTGENKDAEGEPIERDEHLLAVLDRLVLYLRIVHSVDYYNHCEYPYEDEMPNRCGIIHAR 751
Query: 240 GSAPASKVTPQEITDYCSTFQNKMSSLVSSPQEPTPEELDQLGAKKTDAEVEKFIAANTQ 299
G AP S+VT +I +Y T+++K+ ++ + EE LGAK + EVEKF+ ANTQ
Sbjct: 752 GPAP-SRVTSNDIHEYVKTYESKLQQFLTKTALLSDEETKDLGAKDAETEVEKFVQANTQ 810
Query: 300 EISTDKWLCPLSGKKFKGPDFIRKHIFNKHAEKVEEVKKE 339
E++ DKWLCPLSGKKFKGP+FIRKHIFNKH EKV+EV+KE
Sbjct: 811 ELAKDKWLCPLSGKKFKGPEFIRKHIFNKHEEKVDEVRKE 850
>sp|B3N3F7|SRRT_DROER Serrate RNA effector molecule homolog OS=Drosophila erecta GN=Ars2
PE=3 SV=1
Length = 947
Score = 403 bits (1036), Expect = e-112, Method: Compositional matrix adjust.
Identities = 210/339 (61%), Positives = 255/339 (75%), Gaps = 28/339 (8%)
Query: 28 PRALHRTSSIFLRNLAPTITKAEVENLCKRYSGFLRVAIADPQPDRRWFRRGWVTFRRDV 87
PRALHRTSSIFLRNLAP+IT+AE+E +C R++G+LRVAIADP +RRW+RRGW+TF RDV
Sbjct: 512 PRALHRTSSIFLRNLAPSITRAEIETVCNRFTGYLRVAIADPLVERRWYRRGWITFMRDV 571
Query: 88 DIKEICWNLNNIRLRDCELGAIVNRDLSRRVRTVSGLTSLKPVVQFDMKL---------- 137
+IKEICW LNN RLRDCE+GAIVNRDLSRRVR +G+T+ K VV+ D+KL
Sbjct: 572 NIKEICWGLNNHRLRDCEMGAIVNRDLSRRVRPANGITAHKQVVRSDIKLCAKIALNLDE 631
Query: 138 --SLW----TDGQEPAQQPMS--------YTLSSKNPVLQNITDYLIEEASAEEEELLGK 183
LW TD P++ S Y +SKNPVLQNITDYLIEEASAEEEELLG
Sbjct: 632 RFRLWAEVPTDDSHPSRADESTENGSGSTYGFNSKNPVLQNITDYLIEEASAEEEELLGL 691
Query: 184 SEENTE---ETEQVDPNVLRVLDRLILYLRIVHSVDYYNHCEYPNEDEMPNRCGIIHTRG 240
+ EN + E + D ++ VLDRL+LYLRIVHSVDYYNHCEYP EDEMPNRCGIIH RG
Sbjct: 692 TGENKDTDGEPIERDEQLISVLDRLVLYLRIVHSVDYYNHCEYPYEDEMPNRCGIIHARG 751
Query: 241 SAPASKVTPQEITDYCSTFQNKMSSLVSSPQEPTPEELDQLGAKKTDAEVEKFIAANTQE 300
AP +VT ++ +Y T+++K+ ++ + EE+ LGAK + EVEKF+ ANTQE
Sbjct: 752 PAPV-RVTNNDVQEYIKTYESKLQQFLTKTVLLSDEEIKDLGAKDPETEVEKFVQANTQE 810
Query: 301 ISTDKWLCPLSGKKFKGPDFIRKHIFNKHAEKVEEVKKE 339
++ DKWLCPLSGKKFKGP+FIRKHIFNKH EKV+EV+KE
Sbjct: 811 LAKDKWLCPLSGKKFKGPEFIRKHIFNKHEEKVDEVRKE 849
>sp|B4MR46|SRRT_DROWI Serrate RNA effector molecule homolog OS=Drosophila willistoni
GN=Ars2 PE=3 SV=1
Length = 1000
Score = 402 bits (1032), Expect = e-111, Method: Compositional matrix adjust.
Identities = 212/348 (60%), Positives = 255/348 (73%), Gaps = 32/348 (9%)
Query: 23 KNEPPPRALHRTSSIFLRNLAPTITKAEVENLCKRYSGFLRVAIADPQPDRRWFRRGWVT 82
K+ P PRALHRT+SIFLRNLAP+ITKAE+E +C R G+LRVAIADP +RRW+RRGW+T
Sbjct: 555 KDGPQPRALHRTASIFLRNLAPSITKAEIEAICNRSPGYLRVAIADPLVERRWYRRGWIT 614
Query: 83 FRRDVDIKEICWNLNNIRLRDCELGAIVNRDLSRRVRTVSGLTSLKPVVQFDMKL----- 137
F RDV+IKEICW+LNN RLRDCELGAIVNRDLSRRVR +G+T+ K VV+ D+KL
Sbjct: 615 FSRDVNIKEICWSLNNQRLRDCELGAIVNRDLSRRVRPTNGITAHKQVVRSDIKLCAKIA 674
Query: 138 -------SLWTDGQEPAQQ----------------PMSYTLSSKNPVLQNITDYLIEEAS 174
LW D PA +Y ++KNPVLQNITDYLIEEAS
Sbjct: 675 MNLDERFRLWVDEPAPAADGKGETATDATNGSSSGATTYGFNTKNPVLQNITDYLIEEAS 734
Query: 175 AEEEELLGKS-EENTEETEQV--DPNVLRVLDRLILYLRIVHSVDYYNHCEYPNEDEMPN 231
AEEEELLG S ++N E E + D ++ VLDRL+LYLRIVHSVDYYNHCEYP EDEMPN
Sbjct: 735 AEEEELLGLSGDQNDVEGEPIVRDEQLIAVLDRLLLYLRIVHSVDYYNHCEYPYEDEMPN 794
Query: 232 RCGIIHTRGSAPASKVTPQEITDYCSTFQNKMSSLVSSPQEPTPEELDQLGAKKTDAEVE 291
RCGIIH RG AP KVT +I +Y +++ K+ ++ T +++ LGAK + EVE
Sbjct: 795 RCGIIHARGPAPM-KVTSNDIQEYIKSYEGKLQQFLTKTVLLTDDDIKDLGAKDAETEVE 853
Query: 292 KFIAANTQEISTDKWLCPLSGKKFKGPDFIRKHIFNKHAEKVEEVKKE 339
KF+ ANTQE++ DKWLCPLSGKKFKGP+FIRKHIFNKH EKV+EV+KE
Sbjct: 854 KFVQANTQELAKDKWLCPLSGKKFKGPEFIRKHIFNKHEEKVDEVRKE 901
>sp|B4J497|SRRT_DROGR Serrate RNA effector molecule homolog OS=Drosophila grimshawi
GN=Ars2 PE=3 SV=1
Length = 1011
Score = 401 bits (1031), Expect = e-111, Method: Compositional matrix adjust.
Identities = 205/340 (60%), Positives = 255/340 (75%), Gaps = 29/340 (8%)
Query: 28 PRALHRTSSIFLRNLAPTITKAEVENLCKRYSGFLRVAIADPQPDRRWFRRGWVTFRRDV 87
PRALHRTSSIFLRNLAP+ITKAE+E +C R+SG+LRVAIADP +RRW+RRGW+TF RDV
Sbjct: 575 PRALHRTSSIFLRNLAPSITKAEIETICTRFSGYLRVAIADPLVERRWYRRGWITFTRDV 634
Query: 88 DIKEICWNLNNIRLRDCELGAIVNRDLSRRVRTVSGLTSLKPVVQFDMKL---------- 137
+IKEICW+LNN RLRDCE+GAIVNRDLSRRVR +G+T+ K +V+ D+KL
Sbjct: 635 NIKEICWSLNNQRLRDCEMGAIVNRDLSRRVRPANGITAHKQIVRSDIKLCAKIAMNLDE 694
Query: 138 --SLWTDG-------------QEPAQQPMSYTLSSKNPVLQNITDYLIEEASAEEEELL- 181
LW++ +E SY +SKNPVLQNITDYLIEEASAEEEELL
Sbjct: 695 RFKLWSEVDNADNAELNPEELKEATNGSGSYGFNSKNPVLQNITDYLIEEASAEEEELLG 754
Query: 182 --GKSEENTEETEQVDPNVLRVLDRLILYLRIVHSVDYYNHCEYPNEDEMPNRCGIIHTR 239
G S++ E + D +++VLDRL+LYLR+VHSVDYYNHCEYP EDEMPNRCGIIH R
Sbjct: 755 LAGDSKDGEGEPIERDEPLIQVLDRLVLYLRVVHSVDYYNHCEYPYEDEMPNRCGIIHAR 814
Query: 240 GSAPASKVTPQEITDYCSTFQNKMSSLVSSPQEPTPEELDQLGAKKTDAEVEKFIAANTQ 299
G AP +VT ++ +Y +++ K+ ++ + + E + +LGAK + EVEKF+ ANTQ
Sbjct: 815 GPAPM-RVTSNDVQEYIKSYEGKLQQFLAKTVQLSDENIKELGAKNPEKEVEKFVQANTQ 873
Query: 300 EISTDKWLCPLSGKKFKGPDFIRKHIFNKHAEKVEEVKKE 339
E++ DKWLCPLSGKKFKGP+FIRKHIFNKH EKV+EV+KE
Sbjct: 874 ELAKDKWLCPLSGKKFKGPEFIRKHIFNKHEEKVDEVRKE 913
>sp|B4KLY7|SRRT_DROMO Serrate RNA effector molecule homolog OS=Drosophila mojavensis
GN=Ars2 PE=3 SV=1
Length = 980
Score = 399 bits (1025), Expect = e-110, Method: Compositional matrix adjust.
Identities = 209/352 (59%), Positives = 255/352 (72%), Gaps = 34/352 (9%)
Query: 11 NSYNNIINGGESKNEPPPRALHRTSSIFLRNLAPTITKAEVENLCKRYSGFLRVAIADPQ 70
N I+ + K+ P PRALHRTSSIFLRNLAP+ITKAE+E +CKR+SG+LRVAIADP
Sbjct: 523 NEVTETIDLDKVKDGPHPRALHRTSSIFLRNLAPSITKAEIEAICKRFSGYLRVAIADPL 582
Query: 71 PDRRWFRRGWVTFRRDVDIKEICWNLNNIRLRDCELGAIVNRDLSRRVRTVSGLTSLKPV 130
+RRW+RRGW+TF RDV+IKEICW+LNN RLRDCE+GAIVNRDLSRRVR +G+T+ K +
Sbjct: 583 VERRWYRRGWITFTRDVNIKEICWSLNNQRLRDCEMGAIVNRDLSRRVRPANGITAHKQI 642
Query: 131 VQFDMKL------------SLWTD-------------GQEP-----AQQPMSYTLSSKNP 160
V+ D+KL LW D GQE A SY +SKNP
Sbjct: 643 VRADIKLCAKIAMNLDDRFKLWCDSNRSDAEDAEKKAGQEATNGSGASSSPSYGFNSKNP 702
Query: 161 VLQNITDYLIEEASAEEEELLGKSEENTE---ETEQVDPNVLRVLDRLILYLRIVHSVDY 217
VLQNITDYLIEEASAEEEELLG + +N + E + D +++ VLDRL+LYLRIVHSVDY
Sbjct: 703 VLQNITDYLIEEASAEEEELLGLAGDNKDGDGEPIERDESLISVLDRLVLYLRIVHSVDY 762
Query: 218 YNHCEYPNEDEMPNRCGIIHTRGSAPASKVTPQEITDYCSTFQNKMSSLVSSPQEPTPEE 277
YNHCEYP EDEMPNRCGIIH RG AP +VT ++ +Y + K+ ++ + + EE
Sbjct: 763 YNHCEYPYEDEMPNRCGIIHARGPAPM-RVTSNDVQEYIKAYDGKLQQFLTKTVQLSDEE 821
Query: 278 LDQLGAKKTDAEVEKFIAANTQEISTDKWLCPLSGKKFKGPDFIRKHIFNKH 329
+ +LGAK + EVEKF+ ANTQE++ DKWLCPLSGKKFKGP+FIRKHIFNKH
Sbjct: 822 IKELGAKNPETEVEKFVQANTQELAKDKWLCPLSGKKFKGPEFIRKHIFNKH 873
>sp|Q9V9K7|SRRT_DROME Serrate RNA effector molecule homolog OS=Drosophila melanogaster
GN=Ars2 PE=1 SV=2
Length = 943
Score = 397 bits (1019), Expect = e-110, Method: Compositional matrix adjust.
Identities = 205/339 (60%), Positives = 252/339 (74%), Gaps = 28/339 (8%)
Query: 28 PRALHRTSSIFLRNLAPTITKAEVENLCKRYSGFLRVAIADPQPDRRWFRRGWVTFRRDV 87
PRALHRTSSIFLRNLAP+IT++E+E +C R+SG+LRVAIADP +RRW+RRGW+TF RDV
Sbjct: 508 PRALHRTSSIFLRNLAPSITRSEIEAVCNRFSGYLRVAIADPLVERRWYRRGWITFMRDV 567
Query: 88 DIKEICWNLNNIRLRDCELGAIVNRDLSRRVRTVSGLTSLKPVVQFDMKL---------- 137
+IKEICW LNN RLRDCE+GAIVNRDLSRRVR +G+T+ K VV+ D+KL
Sbjct: 568 NIKEICWGLNNQRLRDCEMGAIVNRDLSRRVRPANGITAHKQVVRSDIKLCAKIALNLDE 627
Query: 138 --SLWTDGQEPAQQPM------------SYTLSSKNPVLQNITDYLIEEASAEEEELLGK 183
LW +G + +Y +S+NPVLQNITDYLIEEASAEEEELLG
Sbjct: 628 KFRLWAEGPKDDSNSARANESSENGSGSTYGFNSQNPVLQNITDYLIEEASAEEEELLGL 687
Query: 184 SEENTE-ETEQV--DPNVLRVLDRLILYLRIVHSVDYYNHCEYPNEDEMPNRCGIIHTRG 240
+ EN + E E + D ++ VLDRL+LYLRIVHSVDYYNHCEYP EDEMPNRCGIIH RG
Sbjct: 688 TGENKDTEGEPIERDEQLISVLDRLVLYLRIVHSVDYYNHCEYPYEDEMPNRCGIIHARG 747
Query: 241 SAPASKVTPQEITDYCSTFQNKMSSLVSSPQEPTPEELDQLGAKKTDAEVEKFIAANTQE 300
P +VT ++ +Y +++K+ ++ + EE+ LGAK + EVEKF+ ANTQE
Sbjct: 748 PPPV-RVTNNDVQEYIKIYESKLQQFLTKTVPLSDEEIKNLGAKDAETEVEKFVQANTQE 806
Query: 301 ISTDKWLCPLSGKKFKGPDFIRKHIFNKHAEKVEEVKKE 339
++ DKWLCPLSGKKFKGP+FIRKHIFNKH EKV+EV+KE
Sbjct: 807 LAKDKWLCPLSGKKFKGPEFIRKHIFNKHEEKVDEVRKE 845
>sp|B4II37|SRRT_DROSE Serrate RNA effector molecule homolog OS=Drosophila sechellia
GN=Ars2 PE=3 SV=2
Length = 947
Score = 395 bits (1014), Expect = e-109, Method: Compositional matrix adjust.
Identities = 205/341 (60%), Positives = 250/341 (73%), Gaps = 32/341 (9%)
Query: 28 PRALHRTSSIFLRNLAPTITKAEVENLCKRYSGFLRVAIADPQPDRRWFRRGWVTFRRDV 87
PRALHRTSSIFLRNLAP+IT++E+E +C R++G+LRVAIADP +RRW+RRGW+TF RDV
Sbjct: 512 PRALHRTSSIFLRNLAPSITRSEIEAMCNRFTGYLRVAIADPLVERRWYRRGWITFMRDV 571
Query: 88 DIKEICWNLNNIRLRDCELGAIVNRDLSRRVRTVSGLTSLKPVVQFDMKL---------- 137
+IKEICW LNN RLRDCE+GAIVNRDLSRRVR +G+T+ K VV+ D+KL
Sbjct: 572 NIKEICWGLNNQRLRDCEMGAIVNRDLSRRVRPANGITAHKQVVRSDIKLCAKIALNLDE 631
Query: 138 --SLWTDGQEPAQQPMS--------------YTLSSKNPVLQNITDYLIEEASAEEEELL 181
LW + P P S Y +S+NPVLQNITDYLIEEASAEEEELL
Sbjct: 632 KFRLW--AEVPKDDPNSARANESSENGSGSTYGFNSQNPVLQNITDYLIEEASAEEEELL 689
Query: 182 GKSEENTE---ETEQVDPNVLRVLDRLILYLRIVHSVDYYNHCEYPNEDEMPNRCGIIHT 238
G + EN + E + D ++ VLDRL+LYLRIVHSVDYYNHCEYP EDEMPNRCGIIH
Sbjct: 690 GLTGENKDTEGEPIERDEQLISVLDRLVLYLRIVHSVDYYNHCEYPYEDEMPNRCGIIHA 749
Query: 239 RGSAPASKVTPQEITDYCSTFQNKMSSLVSSPQEPTPEELDQLGAKKTDAEVEKFIAANT 298
RG P +VT ++ +Y ++ K+ ++ + EE+ LGAK + EVEKF+ ANT
Sbjct: 750 RGPPPV-RVTNNDVQEYIKMYETKLQQFLTKTVPLSDEEIKNLGAKDAETEVEKFVQANT 808
Query: 299 QEISTDKWLCPLSGKKFKGPDFIRKHIFNKHAEKVEEVKKE 339
QE++ DKWLCPLSGKKFKGP+FIRKHIFNKH EKV+EV+KE
Sbjct: 809 QELAKDKWLCPLSGKKFKGPEFIRKHIFNKHEEKVDEVRKE 849
>sp|B4QCR6|SRRT_DROSI Serrate RNA effector molecule homolog OS=Drosophila simulans
GN=Ars2 PE=3 SV=1
Length = 947
Score = 392 bits (1007), Expect = e-108, Method: Compositional matrix adjust.
Identities = 205/339 (60%), Positives = 250/339 (73%), Gaps = 28/339 (8%)
Query: 28 PRALHRTSSIFLRNLAPTITKAEVENLCKRYSGFLRVAIADPQPDRRWFRRGWVTFRRDV 87
PRALHRTSSIFLRNLAP+IT++E+E +C R++G+LRVAIADP +RRW+RRGW+TF RDV
Sbjct: 512 PRALHRTSSIFLRNLAPSITRSEIEAVCNRFNGYLRVAIADPLVERRWYRRGWITFMRDV 571
Query: 88 DIKEICWNLNNIRLRDCELGAIVNRDLSRRVRTVSGLTSLKPVVQFDMKL---------- 137
+IKEICW LNN RLRDCE+GAIVNRDLSRRVR +G+T+ K VV+ D+KL
Sbjct: 572 NIKEICWGLNNQRLRDCEMGAIVNRDLSRRVRPANGITAHKQVVRSDIKLCAKIALNLDE 631
Query: 138 --SLWT----DGQEPAQQPMS--------YTLSSKNPVLQNITDYLIEEASAEEEELLGK 183
LW D A+ S Y +S+NPVLQNITDYLIEEASAEEEELLG
Sbjct: 632 KFRLWAEVPKDDSNSARANESSENGSGSTYGFNSQNPVLQNITDYLIEEASAEEEELLGL 691
Query: 184 SEENTE---ETEQVDPNVLRVLDRLILYLRIVHSVDYYNHCEYPNEDEMPNRCGIIHTRG 240
+ EN + E + D ++ VLDRL+LYLRIVHSVDYYNHCEYP EDEMPNRCGIIH RG
Sbjct: 692 TGENKDTEGEPIERDEQLISVLDRLVLYLRIVHSVDYYNHCEYPYEDEMPNRCGIIHARG 751
Query: 241 SAPASKVTPQEITDYCSTFQNKMSSLVSSPQEPTPEELDQLGAKKTDAEVEKFIAANTQE 300
P +VT ++ +Y ++ K+ ++ + EE+ LGAK + EVEKF+ ANTQE
Sbjct: 752 PPPV-RVTNNDVQEYIKMYETKLQQFLTKTVPLSDEEIKNLGAKDAETEVEKFVQANTQE 810
Query: 301 ISTDKWLCPLSGKKFKGPDFIRKHIFNKHAEKVEEVKKE 339
++ DKWLCPLSGKKFKGP+FIRKHIFNKH EKV+EV+KE
Sbjct: 811 LAKDKWLCPLSGKKFKGPEFIRKHIFNKHEEKVDEVRKE 849
>sp|Q9BXP5|SRRT_HUMAN Serrate RNA effector molecule homolog OS=Homo sapiens GN=SRRT PE=1
SV=1
Length = 876
Score = 383 bits (984), Expect = e-105, Method: Compositional matrix adjust.
Identities = 193/335 (57%), Positives = 251/335 (74%), Gaps = 25/335 (7%)
Query: 28 PRALHRTSSIFLRNLAPTITKAEVENLCKRYSGFLRVAIADPQPDRRWFRRGWVTFRRDV 87
PR LH+T S+F+RN+AP I++AE+ +LCKRY GF+RVA+++PQP+RR+FRRGWVTF R V
Sbjct: 414 PRPLHKTCSLFMRNIAPNISRAEIISLCKRYPGFMRVALSEPQPERRFFRRGWVTFDRSV 473
Query: 88 DIKEICWNLNNIRLRDCELGAIVNRDLSRRVRTVSGLTSLKPVVQFDMKLS--------- 138
+IKEICWNL NIRLR+CEL VNRDL+RRVR ++G+T K +V+ D+KL+
Sbjct: 474 NIKEICWNLQNIRLRECELSPGVNRDLTRRVRNINGITQHKQIVRNDIKLAAKLIHTLDD 533
Query: 139 ---LWTDGQEPAQQPMSYTLSSKNPVLQNITDYLIEEASAEEEELLGKS-----EENTEE 190
LW EP P+ +L S+NP+L+NITDYLIEE SAEEEELLG S EE +E
Sbjct: 534 RTQLWA--SEPGTPPLPTSLPSQNPILKNITDYLIEEVSAEEEELLGSSGGAPPEEPPKE 591
Query: 191 TEQVDPNV------LRVLDRLILYLRIVHSVDYYNHCEYPNEDEMPNRCGIIHTRGSAPA 244
+ NV ++VLD+L+LYLRIVHS+DYYN CEYPNEDEMPNRCGIIH RG P
Sbjct: 592 GNPAEINVERDEKLIKVLDKLLLYLRIVHSLDYYNTCEYPNEDEMPNRCGIIHVRGPMPP 651
Query: 245 SKVTPQEITDYCSTFQNKMSSLVSSPQEPTPEELDQLGAKKTDAEVEKFIAANTQEISTD 304
++++ E+ ++ TF+ K++ L+S + + EE ++G K + EVEKF+ +NTQE+ D
Sbjct: 652 NRISHGEVLEWQKTFEEKLTPLLSVRESLSEEEAQKMGRKDPEQEVEKFVTSNTQELGKD 711
Query: 305 KWLCPLSGKKFKGPDFIRKHIFNKHAEKVEEVKKE 339
KWLCPLSGKKFKGP+F+RKHIFNKHAEK+EEVKKE
Sbjct: 712 KWLCPLSGKKFKGPEFVRKHIFNKHAEKIEEVKKE 746
>sp|Q5R539|SRRT_PONAB Serrate RNA effector molecule homolog OS=Pongo abelii GN=SRRT PE=2
SV=1
Length = 871
Score = 383 bits (983), Expect = e-105, Method: Compositional matrix adjust.
Identities = 193/335 (57%), Positives = 251/335 (74%), Gaps = 25/335 (7%)
Query: 28 PRALHRTSSIFLRNLAPTITKAEVENLCKRYSGFLRVAIADPQPDRRWFRRGWVTFRRDV 87
PR LH+T S+F+RN+AP I++AE+ +LCKRY GF+RVA+++PQP+RR+FRRGWVTF R V
Sbjct: 413 PRPLHKTCSLFMRNIAPNISRAEIISLCKRYPGFMRVALSEPQPERRFFRRGWVTFDRSV 472
Query: 88 DIKEICWNLNNIRLRDCELGAIVNRDLSRRVRTVSGLTSLKPVVQFDMKLS--------- 138
+IKEICWNL NIRLR+CEL VNRDL+RRVR ++G+T K +V+ D+KL+
Sbjct: 473 NIKEICWNLQNIRLRECELSPGVNRDLTRRVRNINGITQHKQIVRNDIKLAAKLIHTLDD 532
Query: 139 ---LWTDGQEPAQQPMSYTLSSKNPVLQNITDYLIEEASAEEEELLGKS-----EENTEE 190
LW EP P+ +L S+NP+L+NITDYLIEE SAEEEELLG S EE +E
Sbjct: 533 RTQLWA--SEPGTPPLPTSLPSQNPILKNITDYLIEEVSAEEEELLGSSGGAPPEEPPKE 590
Query: 191 TEQVDPNV------LRVLDRLILYLRIVHSVDYYNHCEYPNEDEMPNRCGIIHTRGSAPA 244
+ NV ++VLD+L+LYLRIVHS+DYYN CEYPNEDEMPNRCGIIH RG P
Sbjct: 591 GNPAEINVERDEKLIKVLDKLLLYLRIVHSLDYYNTCEYPNEDEMPNRCGIIHVRGPMPP 650
Query: 245 SKVTPQEITDYCSTFQNKMSSLVSSPQEPTPEELDQLGAKKTDAEVEKFIAANTQEISTD 304
++++ E+ ++ TF+ K++ L+S + + EE ++G K + EVEKF+ +NTQE+ D
Sbjct: 651 NRISHGEVLEWQKTFEEKLTPLLSVRESLSEEEAQKMGRKDPEQEVEKFVTSNTQELGKD 710
Query: 305 KWLCPLSGKKFKGPDFIRKHIFNKHAEKVEEVKKE 339
KWLCPLSGKKFKGP+F+RKHIFNKHAEK+EEVKKE
Sbjct: 711 KWLCPLSGKKFKGPEFVRKHIFNKHAEKIEEVKKE 745
>sp|Q99MR6|SRRT_MOUSE Serrate RNA effector molecule homolog OS=Mus musculus GN=Srrt PE=1
SV=1
Length = 875
Score = 380 bits (976), Expect = e-105, Method: Compositional matrix adjust.
Identities = 190/335 (56%), Positives = 248/335 (74%), Gaps = 25/335 (7%)
Query: 28 PRALHRTSSIFLRNLAPTITKAEVENLCKRYSGFLRVAIADPQPDRRWFRRGWVTFRRDV 87
PR LH+T S+F+RN+AP I++AE+ +LCKRY GF+RVA+++PQP+RR+FRRGWVTF R V
Sbjct: 413 PRPLHKTCSLFMRNIAPNISRAEIISLCKRYPGFMRVALSEPQPERRFFRRGWVTFDRSV 472
Query: 88 DIKEICWNLNNIRLRDCELGAIVNRDLSRRVRTVSGLTSLKPVVQFDMKLS--------- 138
+IKEICWNL NIRLR+CEL VNRDL+RRVR ++G+T K +V+ D+KL+
Sbjct: 473 NIKEICWNLQNIRLRECELSPGVNRDLTRRVRNINGITQHKQIVRNDIKLAAKLIHTLDD 532
Query: 139 ---LWTDGQEPAQQPMSYTLSSKNPVLQNITDYLIEEASAEEEELLGKSEEN-------- 187
LW EP P+ +L S+NP+L+NITDYLIEE SAEEEELLG S
Sbjct: 533 RTQLWA--SEPGTPPVPTSLPSQNPILKNITDYLIEEVSAEEEELLGSSGGPPPEEPPKE 590
Query: 188 ---TEETEQVDPNVLRVLDRLILYLRIVHSVDYYNHCEYPNEDEMPNRCGIIHTRGSAPA 244
E + D +++VLD+L+LYLRIVHS+DYYN CEYPNEDEMPNRCGIIH RG P
Sbjct: 591 GNPAEINVERDEKLIKVLDKLLLYLRIVHSLDYYNTCEYPNEDEMPNRCGIIHVRGPMPP 650
Query: 245 SKVTPQEITDYCSTFQNKMSSLVSSPQEPTPEELDQLGAKKTDAEVEKFIAANTQEISTD 304
++++ E+ ++ TF+ K++ L+S + + EE ++G K + EVEKF+ +NTQE+ D
Sbjct: 651 NRISHGEVLEWQKTFEEKLTPLLSVRESLSEEEAQKMGRKDPEQEVEKFVTSNTQELGKD 710
Query: 305 KWLCPLSGKKFKGPDFIRKHIFNKHAEKVEEVKKE 339
KWLCPLSGKKFKGP+F+RKHIFNKHAEK+EEVKKE
Sbjct: 711 KWLCPLSGKKFKGPEFVRKHIFNKHAEKIEEVKKE 745
>sp|A4IFB1|SRRT_BOVIN Serrate RNA effector molecule homolog OS=Bos taurus GN=SRRT PE=2
SV=1
Length = 876
Score = 379 bits (974), Expect = e-104, Method: Compositional matrix adjust.
Identities = 192/335 (57%), Positives = 250/335 (74%), Gaps = 25/335 (7%)
Query: 28 PRALHRTSSIFLRNLAPTITKAEVENLCKRYSGFLRVAIADPQPDRRWFRRGWVTFRRDV 87
PR LH+T S+F+RN+AP I++AE+ +LCKRY GF+RVA+++PQP+RR+FRRGWVTF R V
Sbjct: 414 PRPLHKTCSLFMRNIAPNISRAEIISLCKRYPGFMRVALSEPQPERRFFRRGWVTFDRSV 473
Query: 88 DIKEICWNLNNIRLRDCELGAIVNRDLSRRVRTVSGLTSLKPVVQFDMKLS--------- 138
+IKEICWNL NIRLR+CEL VNRDL+RRVR ++G+T K +V+ D+KL+
Sbjct: 474 NIKEICWNLQNIRLRECELSPGVNRDLTRRVRNINGITQHKQIVRNDIKLAAKLVHTLDD 533
Query: 139 ---LWTDGQEPAQQPMSYTLSSKNPVLQNITDYLIEEASAEEEELLGKS-----EENTEE 190
LW EP + +L S+NP+L+NITDYLIEE SAEEEELLG S EE +E
Sbjct: 534 RTQLWA--PEPGTPALPASLPSQNPILKNITDYLIEEVSAEEEELLGSSGGAPPEEPPKE 591
Query: 191 TEQVDPNV------LRVLDRLILYLRIVHSVDYYNHCEYPNEDEMPNRCGIIHTRGSAPA 244
+ NV ++VLD+L+LYLRIVHS+DYYN CEYPNEDEMPNRCGIIH RG P
Sbjct: 592 GNPAEINVERDEKLIKVLDKLLLYLRIVHSLDYYNTCEYPNEDEMPNRCGIIHVRGPMPP 651
Query: 245 SKVTPQEITDYCSTFQNKMSSLVSSPQEPTPEELDQLGAKKTDAEVEKFIAANTQEISTD 304
++++ E+ ++ TF+ K++ L+S + + EE ++G K + EVEKF+ +NTQE+ D
Sbjct: 652 NRISHGEVLEWQKTFEEKLTPLLSVRESLSEEEAQKMGRKDPEQEVEKFVTSNTQELGKD 711
Query: 305 KWLCPLSGKKFKGPDFIRKHIFNKHAEKVEEVKKE 339
KWLCPLSGKKFKGP+F+RKHIFNKHAEK+EEVKKE
Sbjct: 712 KWLCPLSGKKFKGPEFVRKHIFNKHAEKIEEVKKE 746
>sp|Q66I22|SRRT_DANRE Serrate RNA effector molecule homolog OS=Danio rerio GN=srrt PE=2
SV=1
Length = 896
Score = 377 bits (967), Expect = e-104, Method: Compositional matrix adjust.
Identities = 192/340 (56%), Positives = 254/340 (74%), Gaps = 26/340 (7%)
Query: 24 NEPP-PRALHRTSSIFLRNLAPTITKAEVENLCKRYSGFLRVAIADPQPDRRWFRRGWVT 82
++PP PR LHRT S+F+R++APTI+KAE+ LC+RY GF+RV +++PQP+RR+FRR WVT
Sbjct: 440 DQPPRPRPLHRTCSLFMRSIAPTISKAEIVALCRRYPGFMRVCLSEPQPERRFFRRCWVT 499
Query: 83 FRRDVDIKEICWNLNNIRLRDCELGAIVNRDLSRRVRTVSGLTSLKPVVQFDMKLS---- 138
F R V+IKEICWNL NIRLRDCEL VNRDL+RRVR V+G+T K V++ D+KL+
Sbjct: 500 FDRGVNIKEICWNLQNIRLRDCELAPGVNRDLARRVRNVNGITQHKQVLRNDIKLAAKLI 559
Query: 139 --------LWTDGQEPAQQPMSYTLSSKNPVLQNITDYLIEEASAEEEELLGK-----SE 185
LW+ Q+P ++ + L ++NP+L+NITDYLIEE SAEEEELLG SE
Sbjct: 560 HALDDREKLWS--QKPREETPTLELPAQNPILKNITDYLIEEVSAEEEELLGSAGGGDSE 617
Query: 186 ENTEE------TEQVDPNVLRVLDRLILYLRIVHSVDYYNHCEYPNEDEMPNRCGIIHTR 239
+ ++E T + D +++VLDRL+ YLRIVHS+DYYN CEYP+EDEMPNRCGIIH R
Sbjct: 618 DGSKEGNPTEITVERDEKLVKVLDRLLFYLRIVHSIDYYNTCEYPSEDEMPNRCGIIHVR 677
Query: 240 GSAPASKVTPQEITDYCSTFQNKMSSLVSSPQEPTPEELDQLGAKKTDAEVEKFIAANTQ 299
G P +++T +E++D+ TF+ KM L S + + +E ++G K + EVEKF+ ANTQ
Sbjct: 678 GPIPPNRITLREVSDWQKTFEEKMGPLFSVKENLSEDEAAKMGRKDPEQEVEKFVVANTQ 737
Query: 300 EISTDKWLCPLSGKKFKGPDFIRKHIFNKHAEKVEEVKKE 339
E+ DKWLCPLSGKKFKGP+F+RKHI NKH +K+EEVKKE
Sbjct: 738 ELGKDKWLCPLSGKKFKGPEFVRKHILNKHGDKIEEVKKE 777
>sp|B1H1X4|SRRTA_XENLA Serrate RNA effector molecule homolog A OS=Xenopus laevis GN=srrt-a
PE=2 SV=1
Length = 849
Score = 365 bits (937), Expect = e-100, Method: Compositional matrix adjust.
Identities = 177/335 (52%), Positives = 242/335 (72%), Gaps = 32/335 (9%)
Query: 28 PRALHRTSSIFLRNLAPTITKAEVENLCKRYSGFLRVAIADPQPDRRWFRRGWVTFRRDV 87
PR LH+T SIF+RN+ P I+KAE+ LCKRY GF+RVA+++PQP+RR+ R+ +VTF R V
Sbjct: 406 PRPLHKTCSIFMRNIPPNISKAEITALCKRYPGFMRVALSEPQPERRFLRKAYVTFDRSV 465
Query: 88 DIKEICWNLNNIRLRDCELGAIVNRDLSRRVRTVSGLTSLKPVVQFDMKLS--------- 138
+IKEICW++ NIRLR+CEL VNRDL+ RVR ++G+T +P+V+ D+KL+
Sbjct: 466 NIKEICWSVQNIRLRECELSPGVNRDLTYRVRNINGITLHRPIVRNDIKLAARLIHALDE 525
Query: 139 ---LWTDGQEPAQQPMSYTLSSKNPVLQNITDYLIEEASAEEEELL---GKSEEN----- 187
LW Q + ++NP+L+NITDYLI+E +AEEEELL G++ E
Sbjct: 526 RAVLWEGEQ---------MVLAQNPILKNITDYLIDEVNAEEEELLFSAGRTPETELPKD 576
Query: 188 ---TEETEQVDPNVLRVLDRLILYLRIVHSVDYYNHCEYPNEDEMPNRCGIIHTRGSAPA 244
TE + + D +++VLD+L+ YLRIVHSVDYYN CEYPNEDEMP RCG++H RG P
Sbjct: 577 GNPTEISVERDDKLIKVLDKLLFYLRIVHSVDYYNTCEYPNEDEMPTRCGMMHVRGPLPP 636
Query: 245 SKVTPQEITDYCSTFQNKMSSLVSSPQEPTPEELDQLGAKKTDAEVEKFIAANTQEISTD 304
++V+ E+ ++ TF+ K++ L + + + EE ++G K + EVEKF+AANTQE+ +
Sbjct: 637 NRVSHGEVAEWQKTFEEKLAPLFAVRETLSEEESIKMGKKDPEQEVEKFVAANTQELGKE 696
Query: 305 KWLCPLSGKKFKGPDFIRKHIFNKHAEKVEEVKKE 339
KWLCPLSGKKFKGP+F+RKHIFNKHAEK+EEVKKE
Sbjct: 697 KWLCPLSGKKFKGPEFVRKHIFNKHAEKIEEVKKE 731
>sp|Q6INH5|SRRTB_XENLA Serrate RNA effector molecule homolog B OS=Xenopus laevis GN=srrt-b
PE=2 SV=1
Length = 844
Score = 364 bits (935), Expect = e-100, Method: Compositional matrix adjust.
Identities = 177/335 (52%), Positives = 245/335 (73%), Gaps = 29/335 (8%)
Query: 28 PRALHRTSSIFLRNLAPTITKAEVENLCKRYSGFLRVAIADPQPDRRWFRRGWVTFRRDV 87
PR LH+T SIF+RN+ P I+KAE+ LCKRY GF+RVA+++PQP+RR+ R+ +VTF R V
Sbjct: 398 PRPLHKTCSIFMRNIPPNISKAEITALCKRYPGFMRVALSEPQPERRFLRKAYVTFDRSV 457
Query: 88 DIKEICWNLNNIRLRDCELGAIVNRDLSRRVRTVSGLTSLKPVVQFDMKLS--------- 138
+IKEICW++ NIRLR+CEL VNRDL+ RVR ++G+T +P+V+ D+KL+
Sbjct: 458 NIKEICWSVQNIRLRECELSPGVNRDLTYRVRNINGITLHRPIVRNDIKLAARLIHALDE 517
Query: 139 ---LWTDGQEPAQQPMSYTLSSKNPVLQNITDYLIEEASAEEEELL---GKSEEN----- 187
LW +G++ Q +S++NP+L+NITDYLI+E +AEEEELL G++ E
Sbjct: 518 RAQLW-EGEQGDQ-----VVSAQNPILKNITDYLIDEVNAEEEELLSSAGRTPETEAPKE 571
Query: 188 ---TEETEQVDPNVLRVLDRLILYLRIVHSVDYYNHCEYPNEDEMPNRCGIIHTRGSAPA 244
TE T + D +++VLD+L+ YLRIVHSVDYYN CEYPNEDEMP RCG++H RG P
Sbjct: 572 GNPTEITVERDEKLIKVLDKLLFYLRIVHSVDYYNTCEYPNEDEMPTRCGMMHVRGPLPP 631
Query: 245 SKVTPQEITDYCSTFQNKMSSLVSSPQEPTPEELDQLGAKKTDAEVEKFIAANTQEISTD 304
++V+ E+T++ T + K++ L + + + +E ++G K + E EKF+ ANTQE+ +
Sbjct: 632 NRVSHGEVTEWQKTIEEKLAPLFAVRETLSEDEAMKMGKKDPEQEAEKFVTANTQELGKE 691
Query: 305 KWLCPLSGKKFKGPDFIRKHIFNKHAEKVEEVKKE 339
KWLCPLSGKKFKGP+F+RKHIFNKHAEK+EEVKKE
Sbjct: 692 KWLCPLSGKKFKGPEFVRKHIFNKHAEKIEEVKKE 726
>sp|A8XEG9|SRRT_CAEBR Serrate RNA effector molecule homolog OS=Caenorhabditis briggsae
GN=CBG12064 PE=3 SV=1
Length = 715
Score = 298 bits (763), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 149/347 (42%), Positives = 220/347 (63%), Gaps = 38/347 (10%)
Query: 31 LHRTSSIFLRNLAPTITKAEVENLCKRYSGFLRVAIADPQPDRRWFRRGWVTFRRDVDIK 90
+H+T S+FLRN+ P +T E+E+ CK+Y GFLR+A+ D +RR++RRGW TF+RDV+IK
Sbjct: 265 IHKTCSVFLRNIPPGLTYEELESTCKKYPGFLRLALTDGIAERRFYRRGWATFKRDVNIK 324
Query: 91 EICWNLNNIRLRDCELGAIVNRDLSRRVRTVSGLTSLKPVVQFDMKLSLW---------- 140
EICW LN RLR+ +L AI+NRD++RRVRT +G+ + K V D+KL++
Sbjct: 325 EICWGLNAHRLRETDLNAIINRDITRRVRTNNGVAAHKQVALNDLKLAVKLTALYDKKLG 384
Query: 141 ---------TDGQEPAQQPMSYTLSSKNPVLQNITDYL----IEEASAEEEELLGKSEEN 187
+D ++ + + +S NP+++ I + + + S EE ELLG S
Sbjct: 385 LFNAADESESDREKDIRMGVDLVAASTNPLVKEIKSIVPKDTLNDISEEEAELLGVSNGG 444
Query: 188 TEETEQV----DPNVLRVLDRLILYLRIVHSVDYYNHCEYPNEDEMPNRCGIIHTRGSAP 243
++++V D +L+ LD LI+YLRIVHS+D+YNH Y ED MPNRCG+IH RG P
Sbjct: 445 DSQSDKVRYERDDTILKALDLLIIYLRIVHSIDFYNHGHYAQEDSMPNRCGLIHVRGQPP 504
Query: 244 ASK----------VTPQE-ITDYCSTFQNKMSSLVSSPQEPTPEELDQLGAKKTDAEVEK 292
+ + PQ+ I D+ S F +++ + Q + E+++++G K + EVE
Sbjct: 505 SGASINTDENGDLIVPQKFINDFISGFNSRIDKGLIEKQYVSEEDMEKMGKKDGEKEVEA 564
Query: 293 FIAANTQEISTDKWLCPLSGKKFKGPDFIRKHIFNKHAEKVEEVKKE 339
FIA NT E++ DKWLCPLSGKKFKGP+FIRKH+ +KH +K+EE + E
Sbjct: 565 FIAINTVELAKDKWLCPLSGKKFKGPEFIRKHLQSKHEDKLEEARAE 611
>sp|Q966L5|SRRT_CAEEL Serrate RNA effector molecule homolog OS=Caenorhabditis elegans
GN=E01A2.2 PE=3 SV=1
Length = 712
Score = 296 bits (759), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 153/347 (44%), Positives = 218/347 (62%), Gaps = 38/347 (10%)
Query: 31 LHRTSSIFLRNLAPTITKAEVENLCKRYSGFLRVAIADPQPDRRWFRRGWVTFRRDVDIK 90
+HRT S+FLRN+ P +T E+E LCK+ GFLR+A+ D +R+++RRGW TF+RD++IK
Sbjct: 262 IHRTCSVFLRNIPPGLTYEELEGLCKKSPGFLRLALTDGIAERKFYRRGWATFKRDINIK 321
Query: 91 EICWNLNNIRLRDCELGAIVNRDLSRRVRTVSGLTSLKPV------------VQFDMKLS 138
EICW LN RLR+ +L AI+NRD++RRVRT +G+ S K V V +D K+
Sbjct: 322 EICWALNAHRLRETDLNAIINRDITRRVRTNNGIASHKQVAINDLKLAVKLTVLYDKKIG 381
Query: 139 LWTDGQEP-AQQPMSYTL------SSKNPVLQNITDY----LIEEASAEEEELLGKSEEN 187
L+ E A + M + +S NP+++ + ++ + S EE ELLG S
Sbjct: 382 LFNAADEADADREMDIRMGVDLVAASTNPLIKEVKSLVPHDVLNDISEEEAELLGVSNGG 441
Query: 188 TEETEQV----DPNVLRVLDRLILYLRIVHSVDYYNHCEYPNEDEMPNRCGIIHTRGSAP 243
E++ D N+L+ LD LI+YLRIVHS+D+YNH Y ED MPNRCG+IH RG P
Sbjct: 442 EAPAEKIRFERDDNILKALDLLIVYLRIVHSIDFYNHGHYAQEDSMPNRCGLIHVRGQPP 501
Query: 244 A----------SKVTPQE-ITDYCSTFQNKMSSLVSSPQEPTPEELDQLGAKKTDAEVEK 292
+ + V PQ+ + D+ S F +++ + Q + EEL+++G K + EVE
Sbjct: 502 SGVSITTDEDGALVVPQKFVNDFISGFNSRIEKGLIEKQYVSEEELEKMGKKDGEKEVEA 561
Query: 293 FIAANTQEISTDKWLCPLSGKKFKGPDFIRKHIFNKHAEKVEEVKKE 339
FI NT E++ DKWLCPLSGKKFKGP+FIRKH+ +KH +K+EE + E
Sbjct: 562 FIQKNTVELAKDKWLCPLSGKKFKGPEFIRKHLQSKHEDKLEEARAE 608
>sp|Q60436|SRRT_CRIGR Serrate RNA effector molecule homolog (Fragment) OS=Cricetulus
griseus GN=SRRT PE=2 SV=3
Length = 306
Score = 205 bits (521), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 98/175 (56%), Positives = 128/175 (73%), Gaps = 11/175 (6%)
Query: 176 EEEELLGKSEEN-----------TEETEQVDPNVLRVLDRLILYLRIVHSVDYYNHCEYP 224
+EEELLG S E + D +++VLD+L+LYLRIVHS+DYYN CEYP
Sbjct: 2 KEEELLGSSGGPPPEEPPKEGNPAEINVERDEKLIKVLDKLLLYLRIVHSLDYYNTCEYP 61
Query: 225 NEDEMPNRCGIIHTRGSAPASKVTPQEITDYCSTFQNKMSSLVSSPQEPTPEELDQLGAK 284
NEDEMPNRCGIIH RG P ++++ E+ ++ TF+ K++ L+S + + EE ++G K
Sbjct: 62 NEDEMPNRCGIIHVRGPMPPNRISHGEVLEWQKTFEEKLTPLLSVRESLSEEEAQKMGRK 121
Query: 285 KTDAEVEKFIAANTQEISTDKWLCPLSGKKFKGPDFIRKHIFNKHAEKVEEVKKE 339
T+ EVEKF+ +NTQE+ DKWLCPLSGKKFKGP+F+RKHIFNKHAEK+EEVKKE
Sbjct: 122 DTEQEVEKFVTSNTQELGKDKWLCPLSGKKFKGPEFVRKHIFNKHAEKIEEVKKE 176
>sp|O94326|YGK8_SCHPO Zinc finger protein C725.08 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=SPBC725.08 PE=1 SV=1
Length = 609
Score = 45.1 bits (105), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 64/142 (45%), Gaps = 6/142 (4%)
Query: 199 LRVLDRLILYLRIVHSVDYYNHCEYPNEDEMPNRCGIIHTRGSAPASKVTPQEITDYCST 258
+R+ D YLR V + D++ EY + + ++R SK QE + S
Sbjct: 371 IRLSDLYAEYLRQVATFDFWTSKEYESLIALLQDSPAGYSRKKFNPSKEVGQEENIWLSD 430
Query: 259 FQNKMSSLVSSPQEPTPEELDQLGAKKTDAEVEKFIAANTQEISTDKWLCPLS--GKKFK 316
+N + L+ EP ++ GA + + + + + K+ C + K F
Sbjct: 431 LENNFACLL----EPENVDIKAKGALPVEDFINNELDSVIMKEDEQKYRCHVGTCAKLFL 486
Query: 317 GPDFIRKHIFNKHAEKVEEVKK 338
GP+F+RKHI KH + ++ +KK
Sbjct: 487 GPEFVRKHINKKHKDWLDHIKK 508
>sp|Q9ZVD0|SRRT_ARATH Serrate RNA effector molecule OS=Arabidopsis thaliana GN=SE PE=1
SV=2
Length = 720
Score = 41.6 bits (96), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 67/146 (45%), Gaps = 23/146 (15%)
Query: 199 LRVLDRLILYLRIVHSVDYYNHCEYPNEDEMPNRCGIIHTRGSAPASKVTPQEI-TDYCS 257
+ +LD L+ YL VH +DYY E NE + G+ H R S E + + S
Sbjct: 400 VELLDTLVTYLWRVHGLDYYGKVET-NEAK-----GLRHVRAEGKVSDAKGDENESKFDS 453
Query: 258 TFQNKMSSLVSSPQEPTPEELDQLGAK-KTDAEVEKFIAANTQEISTD----KWLCPLSG 312
+Q ++ Q+P L+ + AK K DA + + + ++I + K+ C G
Sbjct: 454 HWQERLKG-----QDP----LEVMAAKEKIDAAATEALDPHVRKIRDEKYGWKYGCGAKG 504
Query: 313 --KKFKGPDFIRKHIFNKHAEKVEEV 336
K F +F+ KH+ KH E V E+
Sbjct: 505 CTKLFHAAEFVYKHLKLKHTELVTEL 530
>sp|Q4HZ47|ESF2_GIBZE Pre-rRNA-processing protein ESF2 OS=Gibberella zeae (strain PH-1 /
ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=ESF2 PE=3
SV=1
Length = 321
Score = 36.2 bits (82), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 44/97 (45%), Gaps = 13/97 (13%)
Query: 30 ALHRTSSIFLRNLAPTITKAEVENLCKRYSGFLRVAIADPQP------------DRRWFR 77
A+ ++ ++L + P + A++ +L + Y R+ +A P +R +
Sbjct: 113 AIKKSGVVYLSRIPPFMKPAKLRSLLEPYGTINRIFLAPEDPASHARRVRAGGNKKRSYT 172
Query: 78 RGWVTFRRDVDIKEICWNLNNIRLRDCELGAIVNRDL 114
GWV F + D K +C +L N R + G+ + DL
Sbjct: 173 EGWVEFTKKKDAKAVC-DLLNARTIGGKKGSYYHDDL 208
>sp|Q97AJ3|CARB_THEVO Carbamoyl-phosphate synthase large chain OS=Thermoplasma volcanium
(strain ATCC 51530 / DSM 4299 / JCM 9571 / NBRC 15438 /
GSS1) GN=carB PE=3 SV=1
Length = 1044
Score = 33.9 bits (76), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 46/98 (46%), Gaps = 16/98 (16%)
Query: 162 LQNITDYL--IEEASAEEEEL----LGKSEENTEETEQVDPNVL---RVLDRLILYLRIV 212
+QNI DYL +E E + LG S+E T +DP+ + R+ +R++ + +
Sbjct: 456 MQNIVDYLKTLEFGHIPENLISLKKLGISDEIIGRTCGIDPDEITRYRITNRILPVFKEI 515
Query: 213 HS-------VDYYNHCEYPNEDEMPNRCGIIHTRGSAP 243
+ + Y + Y +EDE+P G + GS P
Sbjct: 516 DTCSGEFEVIAPYLYSTYEDEDELPGISGFVAIIGSGP 553
>sp|Q28579|IL1A_SHEEP Interleukin-1 alpha OS=Ovis aries GN=IL1A PE=2 SV=1
Length = 268
Score = 32.7 bits (73), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 39/183 (21%), Positives = 73/183 (39%), Gaps = 35/183 (19%)
Query: 77 RRGWVTFRRDVDIKEICWNLNNIRLRDCELGAIVN----RDLSRRVRTVSGLTSLKPVVQ 132
R +F+ +V +N + ++C L +N RD+S T + L +L+ V+
Sbjct: 112 RSAHYSFQSNVK-----YNFMRVIHQECILNDALNQSIIRDMSGPYMTAATLNNLEEAVK 166
Query: 133 FDMKLSLWTDGQEPAQQPMSYTLSSKNPVLQNITDYLIEEASAEEEELLGKSEENTEETE 192
FDM + +E +Q P++ +S L A E+E +L K T
Sbjct: 167 FDMVAYV---SEEDSQLPVTLRISKTQ---------LFVSAQNEDEPVLHKEMPET---- 210
Query: 193 QVDPNVLRVLDRLILYLRIVHSVDYYNHCEYPNEDEMPNRCGIIHTRGSAPASKVTPQEI 252
P +++ L+ + S+DY+ +P + ++H P+ I
Sbjct: 211 ---PKIIKDETNLLFFWEKHGSMDYFKSVAHPKLFIATKQEKLVHMASGPPS-------I 260
Query: 253 TDY 255
TD+
Sbjct: 261 TDF 263
>sp|Q2GZQ4|ESF2_CHAGB Pre-rRNA-processing protein ESF2 OS=Chaetomium globosum (strain
ATCC 6205 / CBS 148.51 / DSM 1962 / NBRC 6347 / NRRL
1970) GN=ESF2 PE=3 SV=2
Length = 332
Score = 32.7 bits (73), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 19/80 (23%), Positives = 36/80 (45%), Gaps = 12/80 (15%)
Query: 30 ALHRTSSIFLRNLAPTITKAEVENLCKRYSGFLRVAIADPQP------------DRRWFR 77
A+ ++ ++L + P + A++ +L + Y R+ + P +R F
Sbjct: 116 AIKKSGVVYLSRIPPFMKPAKLRSLLEPYGKINRIFLTPEDPTEHTRRVRNGGNKKRSFT 175
Query: 78 RGWVTFRRDVDIKEICWNLN 97
GWV F + D K++C LN
Sbjct: 176 EGWVEFVKKKDAKKVCDLLN 195
>sp|Q3HWU1|IL1A_BUBCA Interleukin-1 alpha OS=Bubalus carabanensis GN=IL1A PE=2 SV=1
Length = 268
Score = 32.7 bits (73), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 38/172 (22%), Positives = 70/172 (40%), Gaps = 28/172 (16%)
Query: 77 RRGWVTFRRDVDIKEICWNLNNIRLRDCELGAIVN----RDLSRRVRTVSGLTSLKPVVQ 132
R +F+ +V +NL + ++C L +N RDLS T + L +L+ V+
Sbjct: 112 RSAHYSFQSNVK-----YNLLRVIHQECILNDALNQSLIRDLSGPYLTAATLNNLEEAVK 166
Query: 133 FDMKLSLWTDGQEPAQQPMSYTLSSKNPVLQNITDYLIEEASAEEEELLGKSEENTEETE 192
FDM + +E +Q P++ +S L A E+E +L K T
Sbjct: 167 FDMVAYV---SEEDSQLPVTLRISKTQ---------LFVSAQNEDEPVLLKEMPET---- 210
Query: 193 QVDPNVLRVLDRLILYLRIVHSVDYYNHCEYPNEDEMPNRCGIIHTRGSAPA 244
P +++ L+ + S+DY+ +P + ++H P+
Sbjct: 211 ---PKIIKDETNLLFFWEKHGSMDYFKSVAHPKLFIATKQEKLVHMASGPPS 259
>sp|A5GQA2|SYH_SYNR3 Histidine--tRNA ligase OS=Synechococcus sp. (strain RCC307) GN=hisS
PE=3 SV=1
Length = 414
Score = 32.3 bits (72), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 64/151 (42%), Gaps = 22/151 (14%)
Query: 79 GWVTFRRDVDIKEICWNL------NNIRLRDCELGAIVNRDLSRRVRTVSGLTSLKPVVQ 132
G+ R DV+ I W+L ++L LG+ V+R R V L+ + +
Sbjct: 133 GFADPRSDVEAIAIAWDLLEALGITGLQLELNSLGSRVDRQTYRDA-LVGWLSERQNQLD 191
Query: 133 FDMKLSLWTDGQEPAQQPMSYTLSSKNPVLQNITDYLIEEASAEEEELLGKSEENTEETE 192
D + Q A P+ L SKNP Q L+++A E+ L S+ + E E
Sbjct: 192 ADSQ-------QRLATNPLR-ILDSKNPQTQQ----LLQDAPNLEQSL---SDPSRERYE 236
Query: 193 QVDPNVLRVLDRLILYLRIVHSVDYYNHCEY 223
QV + + + R+V +DYY H +
Sbjct: 237 QVKAGLSALKIPYLCNPRLVRGLDYYGHTAF 267
>sp|P08831|IL1A_BOVIN Interleukin-1 alpha OS=Bos taurus GN=IL1A PE=2 SV=1
Length = 268
Score = 32.3 bits (72), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 39/183 (21%), Positives = 73/183 (39%), Gaps = 35/183 (19%)
Query: 77 RRGWVTFRRDVDIKEICWNLNNIRLRDCELGAIVN----RDLSRRVRTVSGLTSLKPVVQ 132
R +F+ +V +N + ++C L +N RD+S T + L +L+ V+
Sbjct: 112 RSAHYSFQSNVK-----YNFMRVIHQECILNDALNQSIIRDMSGPYLTATTLNNLEEAVK 166
Query: 133 FDMKLSLWTDGQEPAQQPMSYTLSSKNPVLQNITDYLIEEASAEEEELLGKSEENTEETE 192
FDM + +E +Q P++ +S L A E+E +L K T
Sbjct: 167 FDMVAYV---SEEDSQLPVTLRISKTQ---------LFVSAQNEDEPVLLKEMPET---- 210
Query: 193 QVDPNVLRVLDRLILYLRIVHSVDYYNHCEYPNEDEMPNRCGIIHTRGSAPASKVTPQEI 252
P +++ L+ + S+DY+ +P + ++H P+ I
Sbjct: 211 ---PKIIKDETNLLFFWEKHGSMDYFKSVAHPKLFIATKQEKLVHMASGPPS-------I 260
Query: 253 TDY 255
TD+
Sbjct: 261 TDF 263
>sp|Q9H6S0|YTDC2_HUMAN Probable ATP-dependent RNA helicase YTHDC2 OS=Homo sapiens GN=YTHDC2
PE=1 SV=2
Length = 1430
Score = 32.0 bits (71), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 37/81 (45%), Gaps = 7/81 (8%)
Query: 227 DEMPNRCGIIHTRGSAPASKVTPQEITDYCSTFQNKMSSLVSSPQEPTPEELDQLGAKKT 286
DEM I + R S VTP I +C + ++L QEP+ +D + +
Sbjct: 1038 DEMTRAHRIANIRC---CSAVTPVTILVFCGPARLASNAL----QEPSSFRVDGIPNDSS 1090
Query: 287 DAEVEKFIAANTQEISTDKWL 307
D+E+E AN + D+WL
Sbjct: 1091 DSEMEDKTTANLAALKLDEWL 1111
>sp|Q9CAE9|FBK53_ARATH Putative F-box/kelch-repeat protein At3g10510 OS=Arabidopsis
thaliana GN=At3g10510 PE=4 SV=1
Length = 371
Score = 32.0 bits (71), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 50/109 (45%), Gaps = 11/109 (10%)
Query: 110 VNRDLSRRVRTVSGLTSLKPVVQFDMKLSLWTDGQEPAQQP-------MSYTLSSKNPVL 162
V++ + ++ V + + +V+FD++ W DG +P + +S T
Sbjct: 171 VSKVIDEKIYIVGRVWASATIVEFDLRTEKWADGTKPGWEADDRWLTSLSTTAGRGPSSF 230
Query: 163 QNITDY-LIEEASAEEEELLGKSEENTEETEQVDPNVLRVLDRLILYLR 210
+N D+ L+E+ ++EE+ + + E V N+L V DR LR
Sbjct: 231 ENNCDHKLMEDILMDKEEI---KHYHLFDNECVMGNILYVYDRHKYILR 276
>sp|Q5R746|YTDC2_PONAB YTH domain-containing protein 2 OS=Pongo abelii GN=YTHDC2 PE=2 SV=1
Length = 671
Score = 31.6 bits (70), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 4/63 (6%)
Query: 245 SKVTPQEITDYCSTFQNKMSSLVSSPQEPTPEELDQLGAKKTDAEVEKFIAANTQEISTD 304
S VTP I +C + ++L QEP+ +D + +D+E+E AN + D
Sbjct: 294 SAVTPVTILVFCGPARLASNAL----QEPSSFRVDGIPNDSSDSEMEDKTTANLAALKLD 349
Query: 305 KWL 307
+WL
Sbjct: 350 EWL 352
>sp|Q0BVF4|THIM_GRABC Hydroxyethylthiazole kinase OS=Granulibacter bethesdensis (strain
ATCC BAA-1260 / CGDNIH1) GN=thiM PE=3 SV=2
Length = 274
Score = 31.6 bits (70), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Query: 155 LSSKNPVLQNITDYLIEEASAEEEELLGKSEENTEETEQVDPNVLRVLDRLILYLRIVHS 214
L K P++ NIT+ ++ +A LG S E E+VD + R+ D L++ L + S
Sbjct: 22 LREKRPLVHNITNLVVTNTTANALLALGASPAMVEGVEEVD-SFARMADSLVINLGTMSS 80
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.133 0.391
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 129,689,060
Number of Sequences: 539616
Number of extensions: 5332975
Number of successful extensions: 17857
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 35
Number of HSP's that attempted gapping in prelim test: 17760
Number of HSP's gapped (non-prelim): 72
length of query: 339
length of database: 191,569,459
effective HSP length: 118
effective length of query: 221
effective length of database: 127,894,771
effective search space: 28264744391
effective search space used: 28264744391
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 61 (28.1 bits)