BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= psy4697
         (383 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|328698577|ref|XP_001942850.2| PREDICTED: protocadherin beta-11-like [Acyrthosiphon pisum]
          Length = 777

 Score =  369 bits (946), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 198/352 (56%), Positives = 246/352 (69%), Gaps = 15/352 (4%)

Query: 2   INEDDFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVN 61
           I EDD LQP+T+V+RA Q+DN DRYALATL +S+ GTSLRELQF ++ Y    LEN+P++
Sbjct: 318 IPEDDLLQPVTMVIRATQFDNADRYALATLAISRPGTSLRELQFLQDHYQAGVLENVPLD 377

Query: 62  YVLLTVTTNKPRDLRVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDTL 121
            VLLTV TNKP+D R+KYWLSN Y + FSIS  GDI L + LDYET D+Y F  +ATD+ 
Sbjct: 378 SVLLTVITNKPKDKRLKYWLSN-YTDIFSISINGDIVLKKPLDYETIDNYVFYAFATDSF 436

Query: 122 MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTL 181
           M TSA VNI+V+NVNDWDPRFRYPQYE ++P I L+ L PG+VIGKVEAADGD+GDRVTL
Sbjct: 437 MNTSAFVNITVLNVNDWDPRFRYPQYEFYVPDISLSQLLPGTVIGKVEAADGDRGDRVTL 496

Query: 182 SLRGPYEKMFSINDSGHISIVDLSALNTSTIQLVVVATDTGNPPRQASVPAIMHFPEAIV 241
           +LRGP  +MF+I DSG I + DLS LNTST  LV VATDTG PPRQASVP I+H P+ +V
Sbjct: 497 ALRGPESRMFAIEDSGDIVLGDLSDLNTSTAHLVAVATDTGIPPRQASVPVIVHLPDTVV 556

Query: 242 QQASSKLNSGTSSTVLIILGVVLIVLGFVIILLILYIHKNKHTK-NNGPPGSSHSKNDSF 300
           + A     S  S TV +I GV+L VL  VII LI++I KNK  K          +K + F
Sbjct: 557 RFAGR--TSANSYTVFVIFGVILGVLSLVIIALIVHIQKNKRPKLGTATNFDVRTKFEGF 614

Query: 301 -LSNVILPEKHVNVVAIPKIQENPVFNGSQEELQTQRGGTNSSIYTATVKKT 351
             +N I  EK   +V +    +NP+FN  ++        +   +YTATVK T
Sbjct: 615 KRTNPIYDEKR--LVGVGTKMQNPLFNPKED--------SADPLYTATVKTT 656


>gi|242020177|ref|XP_002430532.1| conserved hypothetical protein [Pediculus humanus corporis]
 gi|212515696|gb|EEB17794.1| conserved hypothetical protein [Pediculus humanus corporis]
          Length = 708

 Score =  268 bits (686), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 147/285 (51%), Positives = 196/285 (68%), Gaps = 4/285 (1%)

Query: 1   DINEDDFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPV 60
           ++ EDD  QP TLVVRA Q DN+DRYALAT+ +S+ G  ++ L F +  Y    LEN PV
Sbjct: 308 ELEEDDLNQPATLVVRATQVDNKDRYALATVTISRKGGGVQTLHFLQKLYLAGVLENAPV 367

Query: 61  NYVLLTVTTNKPRDLRVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDT 120
           N V+LT  TN+PRD RV+ WL  + G  F +S  GDI+L++ LDYET D Y F V+ATD 
Sbjct: 368 NSVVLTAVTNRPRDKRVRQWLEKEEGV-FGVSNTGDITLLKPLDYETRDVYVFRVHATDG 426

Query: 121 LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVT 180
            +  +A VNI+V+NVNDWDPRFRYPQYE F   +   DL PG V+G +EAADGD+GD +T
Sbjct: 427 RINDTALVNITVLNVNDWDPRFRYPQYEFF---VSAKDLEPGHVVGTIEAADGDRGDHLT 483

Query: 181 LSLRGPYEKMFSINDSGHISIVDLSALNTSTIQLVVVATDTGNPPRQASVPAIMHFPEAI 240
           LSL+GP+  +F IN+SG +SI+   ++N+S   +V VATD+G PPRQ SVP  +HFP  I
Sbjct: 484 LSLKGPHAHLFRINNSGQLSIISSQSINSSDAHIVAVATDSGLPPRQTSVPITIHFPNKI 543

Query: 241 VQQASSKLNSGTSSTVLIILGVVLIVLGFVIILLILYIHKNKHTK 285
           ++ A++ L+ G S  ++ +   +LI L  +II L LYIHK K  K
Sbjct: 544 IKAANTWLSGGESFLMIGVFSTLLIFLLLIIIALGLYIHKGKRKK 588


>gi|345487107|ref|XP_001601515.2| PREDICTED: cadherin-related tumor suppressor-like [Nasonia
           vitripennis]
          Length = 793

 Score =  220 bits (560), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 132/377 (35%), Positives = 208/377 (55%), Gaps = 35/377 (9%)

Query: 2   INEDDFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRE--------LQFSKNEYSVS 53
           + + + +   TLV++A Q DN DRYALAT+IVS+ G+   +        ++F   +Y  S
Sbjct: 312 LQDHELISSATLVIKATQIDNADRYALATVIVSREGSVEDDSANGGRLPVRFVLKDYHAS 371

Query: 54  ALENLPVNYVLLTVTTNKPRDLRVKYWL--SNDYGERFSISRQGDISLMQCLDYETEDSY 111
             EN P   V+LT   NK  D  +++WL  + +  +RFSI+  G++ L   LDYE    +
Sbjct: 372 VPENTPPGSVILTAGVNK-IDPNLRFWLVGAKEDLDRFSITNSGELILKGNLDYERRIQH 430

Query: 112 RFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAA 171
            F V+ TD     +A VN+SV +VN+W+PRFR+P+YE          L  GS++G++EAA
Sbjct: 431 SFLVHVTDKHNNDTARVNVSVEDVNEWEPRFRHPRYEFHA-----RTLREGSIVGRLEAA 485

Query: 172 DGDKGDRVTLSLRGPYEKMFSINDSGHISIVDLSALNTSTIQLVVVATDTGNPPRQASVP 231
           DGD+GDRV+LSLRGP  + F I D+G + +  +   N +  +LV +A+DTG PPR + +P
Sbjct: 486 DGDRGDRVSLSLRGPDARSFEIRDNGELILRSMGPFNGTIARLVAIASDTGKPPRSSMIP 545

Query: 232 AIMHFPEAIVQQASSKLNS---GTSSTVLIILGVVLIVLGFVIILLILYIHKNKHTKNNG 288
            I+H P A     +++      G+S  ++ + G VL +LG VI++LILYI+K+K  K+  
Sbjct: 546 VIVHLPSAGATPVAARAAPAWLGSSVLLVAVFGAVLGLLGVVILILILYIYKHKRPKSG- 604

Query: 289 PPGSSHSKNDSFLSNVILPEKHVNVVAIPKIQENPVFNGSQEELQTQRGGTN-------- 340
             GS  S    +     +P     +   P+I    +   + E  + +R G+N        
Sbjct: 605 --GSVSSVGTGYREKSPVPSA---LSPTPQILGASILQDTLEISRDRRCGSNDIDNPVFG 659

Query: 341 --SSIYTATVKKTLSGK 355
             +  Y AT+K  +S +
Sbjct: 660 EDNDSYNATIKSVISNR 676


>gi|383848809|ref|XP_003700040.1| PREDICTED: protocadherin Fat 4-like [Megachile rotundata]
          Length = 795

 Score =  214 bits (546), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 121/300 (40%), Positives = 181/300 (60%), Gaps = 23/300 (7%)

Query: 4   EDDFLQPITLVVRAIQYDNQDRYALATLIVSK---------AGTSLRELQFSKNEYSVSA 54
           E + L P T+VV+A Q DN D+YAL+T++VS+         AG  L  ++F K ++  + 
Sbjct: 314 EHELLSPATIVVKATQIDNPDKYALSTIVVSRESEWNVEPTAGGRL-PVKFIKRDHQTNI 372

Query: 55  LENLPVNYVLLTVTTNKPRDLRVKYWLSNDYG--ERFSISRQGDISLMQCLDYETEDSYR 112
            EN P   VLLT   NK  D  +++WL       ERFSI+  G++ L   LDYE    + 
Sbjct: 373 PENTPPGSVLLTTAVNK-VDSNLRFWLEGAVEDLERFSITNSGELILKGTLDYERRIQHS 431

Query: 113 FTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAAD 172
           F V  TD     ++ VN+SV +VN+W+PRFR+P+YE        A L  GS++GK+EAAD
Sbjct: 432 FLVRVTDGHHNDTSRVNVSVEDVNEWEPRFRHPRYEFHA-----ATLREGSIVGKLEAAD 486

Query: 173 GDKGDRVTLSLRGPYEKMFSINDSGHISIVDLSALNTSTIQLVVVATDTGNPPRQASVPA 232
           GD+ D+V+LSLRGP  + F I D+G + +   + +N S  +LV VA+D+G PPR + +P 
Sbjct: 487 GDRDDKVSLSLRGPDARSFEIRDNGELILRSAATINGSLARLVAVASDSGRPPRSSMIPV 546

Query: 233 IMHFPEA----IVQQASSKLNSGTSSTVLIILGVVLIVLGFVIILLILYIHKNKHTKNNG 288
           I+H P +    I  +A+     G+S  ++ + G VL +LG +I++LILYI+K+K  K +G
Sbjct: 547 IVHIPSSGSVPIAARAAPAW-LGSSVLLVAVFGAVLGLLGVIILVLILYIYKHKRPKTSG 605


>gi|328787949|ref|XP_624925.3| PREDICTED: protocadherin Fat 4-like [Apis mellifera]
          Length = 797

 Score =  213 bits (542), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 120/300 (40%), Positives = 181/300 (60%), Gaps = 23/300 (7%)

Query: 4   EDDFLQPITLVVRAIQYDNQDRYALATLIVSK---------AGTSLRELQFSKNEYSVSA 54
           E + L P T+VV+A Q DN D+YAL+T++VS+         AG  L  ++F + ++  S 
Sbjct: 314 EHELLSPATIVVKATQLDNPDKYALSTIVVSRETDWNVEPTAGGRL-PIKFIRRDHQTSI 372

Query: 55  LENLPVNYVLLTVTTNKPRDLRVKYWLSNDYG--ERFSISRQGDISLMQCLDYETEDSYR 112
            EN P   VLLT   NK  D  +++WL       ERFSI+  G++ L   LDYE    + 
Sbjct: 373 PENTPPGSVLLTTGVNK-LDSNLRFWLVGAIEDLERFSITNSGELILKGTLDYERRVQHS 431

Query: 113 FTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAAD 172
           F V  TD     ++ VN+SV +VN+W+PRFR+P+YE        A    GS++GK+EAAD
Sbjct: 432 FLVRVTDGHHNDTSRVNVSVEDVNEWEPRFRHPRYEFHA-----ATSREGSIVGKLEAAD 486

Query: 173 GDKGDRVTLSLRGPYEKMFSINDSGHISIVDLSALNTSTIQLVVVATDTGNPPRQASVPA 232
           GD+ D+++LSLRGP  + F I D+G + +  ++ +N S  +LV VA+D+G PPR + +P 
Sbjct: 487 GDRDDKISLSLRGPDARSFEIRDNGELILRSVATVNGSLARLVAVASDSGRPPRSSMIPV 546

Query: 233 IMHFPEA----IVQQASSKLNSGTSSTVLIILGVVLIVLGFVIILLILYIHKNKHTKNNG 288
           I+H P +    I  +A+     G+S  ++ + G VL +LG +I++LILYI+KNK  K +G
Sbjct: 547 IVHVPNSGSLPIAARAAPAW-LGSSVLLVAVFGAVLGLLGVIILVLILYIYKNKRPKTSG 605


>gi|350419819|ref|XP_003492311.1| PREDICTED: protocadherin Fat 4-like [Bombus impatiens]
          Length = 796

 Score =  213 bits (541), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 120/300 (40%), Positives = 182/300 (60%), Gaps = 23/300 (7%)

Query: 4   EDDFLQPITLVVRAIQYDNQDRYALATLIVSK---------AGTSLRELQFSKNEYSVSA 54
           E + L P T+V +A Q DN D+YAL+T++VS+         AG  L  ++F + ++  S 
Sbjct: 314 EHELLSPATIVAKATQIDNPDKYALSTIVVSRESDWNVEPTAGGRL-PVRFIRKDHETSI 372

Query: 55  LENLPVNYVLLTVTTNKPRDLRVKYWL--SNDYGERFSISRQGDISLMQCLDYETEDSYR 112
            EN P   VLLT   NK  D  +++WL  + +  ERFSI+  G++ L   LDYE    + 
Sbjct: 373 PENTPPGSVLLTTGVNK-VDSNLRFWLVGAMEDLERFSITNSGELILKGTLDYERRVQHS 431

Query: 113 FTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAAD 172
           F V  TD     ++ VN+SV +VN+W+PRFR+P+YE        A L  GS++GK+EAAD
Sbjct: 432 FLVRVTDGHHNDTSRVNVSVEDVNEWEPRFRHPRYEFHA-----ATLREGSIVGKLEAAD 486

Query: 173 GDKGDRVTLSLRGPYEKMFSINDSGHISIVDLSALNTSTIQLVVVATDTGNPPRQASVPA 232
           GD+ D+V+LSLRGP  + F I D+G + +   + +N +  +LV VA+D+G PPR + +P 
Sbjct: 487 GDRDDKVSLSLRGPDARSFEIRDNGELILRSATTINGTLARLVAVASDSGRPPRSSMIPV 546

Query: 233 IMHFPEA----IVQQASSKLNSGTSSTVLIILGVVLIVLGFVIILLILYIHKNKHTKNNG 288
           I+H P +    I  +A+     G+S  ++ + G VL +LG +I++LILYI+KNK  K +G
Sbjct: 547 IVHIPNSGSLPIAARAAPAW-LGSSVLLVAVFGAVLGLLGVIILVLILYIYKNKRPKASG 605


>gi|340718806|ref|XP_003397854.1| PREDICTED: protocadherin Fat 4-like [Bombus terrestris]
          Length = 832

 Score =  213 bits (541), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 120/300 (40%), Positives = 180/300 (60%), Gaps = 23/300 (7%)

Query: 4   EDDFLQPITLVVRAIQYDNQDRYALATLIVSK---------AGTSLRELQFSKNEYSVSA 54
           E + L P T+V +A Q DN D+YAL+T++VS+         AG  L  ++F + ++  S 
Sbjct: 314 EHELLSPATIVAKATQIDNPDKYALSTIVVSRESDWNVEPTAGGRL-PVRFIRKDHQTSI 372

Query: 55  LENLPVNYVLLTVTTNKPRDLRVKYWLSNDYG--ERFSISRQGDISLMQCLDYETEDSYR 112
            EN P   VLLT   NK  D  +++WL       ERFSI+  G++ L   LDYE    + 
Sbjct: 373 PENTPPGSVLLTTGVNK-VDSNLRFWLVGAIEDLERFSITNSGELILKGTLDYERRVQHS 431

Query: 113 FTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAAD 172
           F V  TD     ++ VN+SV +VN+W+PRFR+P+YE        A L  GS++GK+EAAD
Sbjct: 432 FLVRVTDGHHNDTSRVNVSVEDVNEWEPRFRHPRYEFHA-----ATLREGSIVGKLEAAD 486

Query: 173 GDKGDRVTLSLRGPYEKMFSINDSGHISIVDLSALNTSTIQLVVVATDTGNPPRQASVPA 232
           GD+ D+V+LSLRGP  + F I D+G + +   + +N +  +LV VA+D+G PPR + +P 
Sbjct: 487 GDRDDKVSLSLRGPDARSFEIRDNGELILRSATTINGTLARLVAVASDSGRPPRSSMIPV 546

Query: 233 IMHFPEA----IVQQASSKLNSGTSSTVLIILGVVLIVLGFVIILLILYIHKNKHTKNNG 288
           I+H P +    I  +A+     G+S  ++ + G VL +LG +I++LILYI+KNK  K +G
Sbjct: 547 IVHIPNSGSLPIAARAAPAW-LGSSVLLVAVFGAVLGLLGVIILVLILYIYKNKRPKASG 605


>gi|380012707|ref|XP_003690419.1| PREDICTED: protocadherin Fat 4-like [Apis florea]
          Length = 790

 Score =  212 bits (540), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 120/300 (40%), Positives = 180/300 (60%), Gaps = 23/300 (7%)

Query: 4   EDDFLQPITLVVRAIQYDNQDRYALATLIVSK---------AGTSLRELQFSKNEYSVSA 54
           E + L P T+VV+A Q DN D+YAL+T++VS+         AG  L  ++F + ++  S 
Sbjct: 305 EHELLSPATIVVKATQLDNPDKYALSTIVVSREADWSVEPTAGGRL-PVKFIRRDHETSI 363

Query: 55  LENLPVNYVLLTVTTNKPRDLRVKYWLSNDYG--ERFSISRQGDISLMQCLDYETEDSYR 112
            EN P   VLLT   NK  D  +++WL       ERFSI+  G++ L   LDYE    + 
Sbjct: 364 PENTPPGSVLLTTGVNK-VDSNLRFWLVGAVEDLERFSITNSGELILKGTLDYERRVQHS 422

Query: 113 FTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAAD 172
           F V  TD     ++ VN+SV +VN+W+PRFR+P+YE        A    GS++GK+EAAD
Sbjct: 423 FLVRVTDGHHNDTSRVNVSVEDVNEWEPRFRHPRYEFHA-----ATSREGSIVGKLEAAD 477

Query: 173 GDKGDRVTLSLRGPYEKMFSINDSGHISIVDLSALNTSTIQLVVVATDTGNPPRQASVPA 232
           GD+ D+++LSLRGP  + F I D+G + +  ++ +N S  +LV VA+D+G PPR + +P 
Sbjct: 478 GDRDDKISLSLRGPDARSFEIRDNGELILKSVATVNGSLARLVAVASDSGRPPRSSMIPV 537

Query: 233 IMHFPEA----IVQQASSKLNSGTSSTVLIILGVVLIVLGFVIILLILYIHKNKHTKNNG 288
           I+H P +    I  +A+     G S  ++ + G VL +LG +I++LILYI+KNK  K +G
Sbjct: 538 IVHVPNSGSLPIAARAAPAWLGG-SVLLVAVFGAVLGLLGVIILVLILYIYKNKRPKTSG 596


>gi|321469413|gb|EFX80393.1| hypothetical protein DAPPUDRAFT_51223 [Daphnia pulex]
          Length = 476

 Score =  209 bits (531), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 103/238 (43%), Positives = 158/238 (66%), Gaps = 5/238 (2%)

Query: 2   INEDDFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVN 61
           + +++ +QP+ LVV+A Q DN DRYAL TL VS++ +   +LQ+ +  YSV  LEN+PV+
Sbjct: 196 LEDNELVQPVILVVKAHQVDNLDRYALTTLTVSRSWSFSPQLQYLQRRYSVQVLENVPVD 255

Query: 62  YVLLTVTTNKPRDLRVKYWLSNDYG--ERFSISRQGDISLMQCLDYETEDSYRFTVYATD 119
             +L +  NKP D  +++ + +  G  + FS+ + G+I L + LDYET+ +++F V+ TD
Sbjct: 256 TTILAMAINKPIDQSIRFVMESHNGTEQAFSVDKTGEIKLERSLDYETQMTHQFVVWVTD 315

Query: 120 TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRV 179
            L   +ATV ++V++VNDWDPRF   +YE  +     + L  GSVIG+V+  DGD  DRV
Sbjct: 316 GLTNDTATVEVTVLDVNDWDPRFELAEYEFIVKE---SALPVGSVIGRVQVDDGDAADRV 372

Query: 180 TLSLRGPYEKMFSINDSGHISIVDLSALNTSTIQLVVVATDTGNPPRQASVPAIMHFP 237
            L L+GP  + F++ D+G +   D S+LN++ I L+VVA D+G PPRQASVP  ++ P
Sbjct: 373 NLQLKGPESRAFNVQDNGDVVFSDPSSLNSTVIHLMVVARDSGIPPRQASVPLKINLP 430


>gi|307196681|gb|EFN78140.1| Protocadherin-like wing polarity protein stan [Harpegnathos
           saltator]
          Length = 807

 Score =  199 bits (506), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 117/301 (38%), Positives = 172/301 (57%), Gaps = 21/301 (6%)

Query: 2   INEDDFLQPITLVVRAIQYDNQDRYALATLIVSK--------AGTSLRELQFSKNEYSVS 53
           ++E +   P T+V++A Q DN DRYALAT++VS+         G  L  ++F   ++  S
Sbjct: 315 LHEHELTSPATIVIKATQVDNPDRYALATIVVSREDGVGPTTVGGRL-PVKFVLKDHQTS 373

Query: 54  ALENLPVNYVLLTVTTNK--PRDLRVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSY 111
             E+ P   VLLT   N     DLR +   +++  ERF I+  G++ L   LDYE    +
Sbjct: 374 VPEDTPSGTVLLTTRVNNTGANDLRFRLMGASEDLERFFITNSGELILRGKLDYERRVQH 433

Query: 112 RFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAA 171
            F VY TD     ++ VNISV  VN+WDPRFR+ +YE          L  GSV+GK+EAA
Sbjct: 434 NFLVYVTDGYYNDTSRVNISVEGVNEWDPRFRHARYEFHA-----RSLREGSVVGKLEAA 488

Query: 172 DGDKGDRVTLSLRGPYEKMFSINDSGHISIVDLSALNTSTIQLVVVATDTGNPPRQASVP 231
           DGD+G++V+LSLRGP  + F I D+G + +      N S  +LV VA+D+G P + A+  
Sbjct: 489 DGDRGEKVSLSLRGPDARFFEIRDNGELVLRSPGPFNGSLARLVAVASDSGTPTKSATTQ 548

Query: 232 AIMHFPEA----IVQQASSKLNSGTSSTVLIILGVVLIVLGFVIILLILYIHKNKHTKNN 287
            I+H P      I  +A+     G+S  ++ +   VL +LG VI++LILYI+K+K  K+ 
Sbjct: 549 VIVHIPNGGSLPIAARAAPAW-LGSSVLLVAVFAAVLGLLGVVILILILYIYKHKRPKSG 607

Query: 288 G 288
           G
Sbjct: 608 G 608



 Score = 38.1 bits (87), Expect = 7.4,   Method: Compositional matrix adjust.
 Identities = 37/149 (24%), Positives = 72/149 (48%), Gaps = 10/149 (6%)

Query: 89  FSISRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYP 145
           F  + +G + L + LDYET  ++   + A D     ++++ T+ ++V++ +D +P F   
Sbjct: 193 FVSALEGTLVLRKSLDYETLTNFSVGIRAQDQGNPPLSSTTTLYVNVIDADDQNPAFLNE 252

Query: 146 QYELFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDSGHISIVD 203
           QY++ +P       +   +   ++AAD D G    V  +++G      ++ D     I  
Sbjct: 253 QYKVIVPRHVKEGKSLRVLPTAIKAADQDVGINAPVRYTIQGAILPFLNL-DFKTAEIAM 311

Query: 204 LSALN----TSTIQLVVVATDTGNPPRQA 228
           + +L+    TS   +V+ AT   NP R A
Sbjct: 312 IRSLHEHELTSPATIVIKATQVDNPDRYA 340


>gi|189237315|ref|XP_972608.2| PREDICTED: similar to Cad96Cb CG13664-PA [Tribolium castaneum]
          Length = 701

 Score =  198 bits (504), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 131/353 (37%), Positives = 200/353 (56%), Gaps = 30/353 (8%)

Query: 1   DINEDDFLQPITLVVRAIQYDNQDRYALATLIVSK-AGTSLRELQFSKNEYSVSALENLP 59
           D+N+ D   P TLV+RA Q DN DRYALATL VS+  G  +R   F    + +   E+ P
Sbjct: 314 DLNDSDLQHPATLVIRATQQDNPDRYALATLTVSREVGNGIR---FLHRIFYIKVPESTP 370

Query: 60  VNYVLLTVTTNKPRDLRVKYWLSN-DYGERFSISRQGDISLMQCLDYETEDSYRFTVYAT 118
           V   + T T N+P +  ++Y++S+ +  + F+I+ +G++SL + LD+E +  Y F V+AT
Sbjct: 371 VGATISTFTNNRP-NQHLRYFVSDQNVLKTFAINTKGELSLKKKLDFEDKAEYFFKVFAT 429

Query: 119 DTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDR 178
           D +   S+ VN++V +VN+W+PRFRYP YE F+         P  +IG++EAADGDK D+
Sbjct: 430 DGITNDSSVVNVTVQDVNEWEPRFRYPHYEFFVTG------QPNELIGRIEAADGDKNDK 483

Query: 179 VTLSLRGPYEKMFSINDSGHISIVDLSALNTSTIQLVVVATDTGNPPRQASVPAIMHFPE 238
           +TL+L G     F I  SG + + + +  ++    L VVATD+GNPPR+ASVP  +HFP+
Sbjct: 484 LTLTLTGVNASNFFITPSGELRLRE-AGPHSGVANLAVVATDSGNPPRRASVPVTVHFPD 542

Query: 239 AIVQQA--SSKLNSGTSSTVLIILGVVLIVLGFVIILLILYIHKNKHTKNNGPPGSSHSK 296
           +       SS+ N+G +  +L  LG +L++L FVI LL+ YI K K       P      
Sbjct: 543 SGDAAGIISSRGNNG-APLLLAGLGAILLLLAFVIALLVAYICKAKRNPRQELP------ 595

Query: 297 NDSFLSNVILPEKHVNVVAIPKIQENPVFNGS-QEELQTQRGGTNSSIYTATV 348
                   + PEK     A+ +   NP+F    +  + T  GG  S +  + +
Sbjct: 596 -------TLQPEKAQGTPAVAERMSNPMFGDRVKSPMATAMGGIPSDLVKSRI 641


>gi|307184598|gb|EFN70936.1| Protocadherin-like wing polarity protein stan [Camponotus
           floridanus]
          Length = 785

 Score =  196 bits (498), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 137/381 (35%), Positives = 208/381 (54%), Gaps = 37/381 (9%)

Query: 2   INEDDFLQPITLVVRAIQYDNQDRYALATLIVSK---------AGTSLRELQFSKNEYSV 52
           + + + +   T+V++A Q +N DRYALAT+IVS+         AG  L  ++F   ++  
Sbjct: 301 LQDHELMTSATIVIKATQVNNLDRYALATVIVSREDGYGVGPTAGGRL-PVKFVLKDHQT 359

Query: 53  SALENLPVNYVLLTVTTNKPRDLRVKYWL--SNDYGERFSISRQGDISLMQCLDYETEDS 110
           S  EN P   +LLT   NK  D  +++WL  + +  ERFSI+  G++ L   LDYE    
Sbjct: 360 SIPENTPRGSILLTTRVNK-ADPDLRFWLVGAAEDLERFSITNSGELILKSNLDYEERIQ 418

Query: 111 YRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEA 170
           + F V+ TD     ++ VNISV +VN+W+PRFRY  YE    H P A    GS++G++ A
Sbjct: 419 HNFLVHVTDGYHNDTSRVNISVEDVNEWEPRFRYTSYEF---HAPSA--REGSIVGRLIA 473

Query: 171 ADGDKGDRVTLSLRGPYEKMFSINDSGHISIVDLSALNTSTIQLVVVATDTGNPPRQASV 230
           ADGD GD+V+LSL+G   K F I D+G + +   S+ N S  + + VA D+G P R  +V
Sbjct: 474 ADGDTGDKVSLSLQGQDAKSFQIKDNGELML--RSSFNGSVARFMAVAFDSGKPSRYNTV 531

Query: 231 PAIMHFPEA----IVQQASSKLNSGTSSTVLIILGVVLIVLGFVIILLILYIHKNKHTKN 286
           P I+H P +    I  +A+     G S  ++ I G VL +LG VI++LILYI+K+K  K+
Sbjct: 532 PVIVHIPNSGSLPIAARAAPAW-LGNSVLLVAIFGAVLGLLGVVILILILYIYKHKRPKS 590

Query: 287 NGPPGS--SHSKNDSFLSNVILPEKHV-------NVVAIP--KIQENPVFNGSQEELQTQ 335
            G   S  +  +  S + + + P   V       + + IP  ++ +N   N S  ++   
Sbjct: 591 GGSVSSVGTAYREKSPVPSALSPMPQVLGANVIQDALEIPRNRVHDNENDNDSHNDIDNP 650

Query: 336 -RGGTNSSIYTATVKKTLSGK 355
             G TN S Y AT+K   S +
Sbjct: 651 VFGETNESSYGATIKSIASAR 671


>gi|270008084|gb|EFA04532.1| hypothetical protein TcasGA2_TC010411 [Tribolium castaneum]
          Length = 1135

 Score =  183 bits (464), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 127/348 (36%), Positives = 190/348 (54%), Gaps = 41/348 (11%)

Query: 1    DINEDDFLQPITLVVRAIQYDNQDRYALATLIVSK-AGTSLRELQFSKNEYSVSALENLP 59
            D+N+ D   P TLV+RA Q DN DRYALATL VS+  G  +R   F    + +   E+ P
Sbjct: 759  DLNDSDLQHPATLVIRATQQDNPDRYALATLTVSREVGNGIR---FLHRIFYIKVPESTP 815

Query: 60   VNYVLLTVTTNKPRDLRVKYWLSN-DYGERFSISRQGDISLMQCLDYETEDSYRFTVYAT 118
            V   + T T N+P    ++Y++S+ +  + F+I+ +G++SL + LD+E +  Y F V+AT
Sbjct: 816  VGATISTFTNNRPNQ-HLRYFVSDQNVLKTFAINTKGELSLKKKLDFEDKAEYFFKVFAT 874

Query: 119  DTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDR 178
            D            + +VN+W+PRFRYP YE F+         P  +IG++EAADGDK D+
Sbjct: 875  D-----------GITDVNEWEPRFRYPHYEFFVTG------QPNELIGRIEAADGDKNDK 917

Query: 179  VTLSLRGPYEKMFSINDSGHISIVDLSALNTSTIQLVVVATDTGNPPRQASVPAIMHFPE 238
            +TL+L G     F I  SG + + + +  ++    L VVATD+GNPPR+ASVP  +HFP+
Sbjct: 918  LTLTLTGVNASNFFITPSGELRLRE-AGPHSGVANLAVVATDSGNPPRRASVPVTVHFPD 976

Query: 239  A--IVQQASSKLNSGTSSTVLIILGVVLIVLGFVIILLILYIHKNKHTKNNGPPGSSHSK 296
            +       SS+ N+G +  +L  LG +L++L FVI LL+ YI K K       P      
Sbjct: 977  SGDAAGIISSRGNNG-APLLLAGLGAILLLLAFVIALLVAYICKAKRNPRQELP------ 1029

Query: 297  NDSFLSNVILPEKHVNVVAIPKIQENPVFNGS-QEELQTQRGGTNSSI 343
                    + PEK     A+ +   NP+F    +  + T  GG  S +
Sbjct: 1030 -------TLQPEKAQGTPAVAERMSNPMFGDRVKSPMATAMGGIPSDL 1070


>gi|66772539|gb|AAY55581.1| IP03406p [Drosophila melanogaster]
          Length = 580

 Score =  181 bits (459), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 117/340 (34%), Positives = 181/340 (53%), Gaps = 26/340 (7%)

Query: 2   INEDDFLQPITLVVRAIQYDNQDRYALATLIVSKAGT--SLRELQFSKNEYSVSALENLP 59
           I   D     TLVV+A Q DN DRYAL T+ +++ G+   L  L F +  + +   E+  
Sbjct: 110 IGYADVANGATLVVKATQIDNPDRYALTTVQLTRPGSHSDLSTLAFVQKRFVMRIREDTA 169

Query: 60  VNYVLLTVTTNKPRDLRVKYWLSNDYGERF-SISRQGDISLMQCLDYETEDSYRFTVYAT 118
           V   +L + TNKP    +KY + +    +F S+   G++ L + LDYE    + F V AT
Sbjct: 170 VGNRILALPTNKPGK-HLKYVIPDPVNSQFFSVGSLGELVLAKPLDYEKMTKHEFQVLAT 228

Query: 119 DTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL---ADLTPGSVIGKVEAADGDK 175
           D +  ++A + + V++VNDW+PRFR   YE  +P   L   AD   G +IGKVEAADGD+
Sbjct: 229 DGMTNSTAELTLEVIDVNDWEPRFRETHYEFMVPKSSLQSRADSFEGVLIGKVEAADGDR 288

Query: 176 GDRVTLSLRGPYEKMFSINDSGHISIV--DLSALNTSTIQLVVVATDTGNPPRQASVPAI 233
            D++ LSLRG +  +F I+ +G+I +    L +LN ST+ L+ +ATDTG PPR  SVP  
Sbjct: 289 NDKLELSLRGQHAGLFEIDSTGNIYMRPEQLQSLNESTVHLIAIATDTGVPPRSTSVPV- 347

Query: 234 MHFPEAIVQQASSKLNSGTSSTVLIILGVVLIVLGFVIILLILYIHKNKHTKNNGPPGSS 293
                ++  +  +   SG +S +L + G+++ +   +I+ L  YI ++K        G S
Sbjct: 348 -----SVTMEGLTLARSGWNSNMLGMFGMIMGLFLMIIVALSCYIVRSKKQ------GKS 396

Query: 294 HSKNDSFLSNVILPEKH-----VNVVAIPKIQENPVFNGS 328
            S       N +  + H      N+V   K+  N   NG+
Sbjct: 397 ASSGLGLGRNRVHSQAHSSVSSANLVTHEKLAGNGNGNGA 436


>gi|281362550|ref|NP_001163727.1| cadherin 96Cb, isoform C [Drosophila melanogaster]
 gi|254693001|gb|ACT79350.1| IP03306p [Drosophila melanogaster]
 gi|272477165|gb|ACZ95021.1| cadherin 96Cb, isoform C [Drosophila melanogaster]
          Length = 785

 Score =  181 bits (458), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 117/340 (34%), Positives = 181/340 (53%), Gaps = 26/340 (7%)

Query: 2   INEDDFLQPITLVVRAIQYDNQDRYALATLIVSKAGT--SLRELQFSKNEYSVSALENLP 59
           I   D     TLVV+A Q DN DRYAL T+ +++ G+   L  L F +  + +   E+  
Sbjct: 315 IGYADVANGATLVVKATQIDNPDRYALTTVQLTRPGSHSDLSTLAFVQKRFVMRIREDTA 374

Query: 60  VNYVLLTVTTNKPRDLRVKYWLSNDYGERF-SISRQGDISLMQCLDYETEDSYRFTVYAT 118
           V   +L + TNKP    +KY + +    +F S+   G++ L + LDYE    + F V AT
Sbjct: 375 VGNRILALPTNKPGK-HLKYVIPDPVNSQFFSVGSLGELVLAKPLDYEKMTKHEFQVLAT 433

Query: 119 DTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL---ADLTPGSVIGKVEAADGDK 175
           D +  ++A + + V++VNDW+PRFR   YE  +P   L   AD   G +IGKVEAADGD+
Sbjct: 434 DGMTNSTAELTLEVIDVNDWEPRFRETHYEFMVPKSSLQSRADSFEGVLIGKVEAADGDR 493

Query: 176 GDRVTLSLRGPYEKMFSINDSGHISIV--DLSALNTSTIQLVVVATDTGNPPRQASVPAI 233
            D++ LSLRG +  +F I+ +G+I +    L +LN ST+ L+ +ATDTG PPR  SVP  
Sbjct: 494 NDKLELSLRGQHAGLFEIDSTGNIYMRPEQLQSLNESTVHLIAIATDTGVPPRSTSVPV- 552

Query: 234 MHFPEAIVQQASSKLNSGTSSTVLIILGVVLIVLGFVIILLILYIHKNKHTKNNGPPGSS 293
                ++  +  +   SG +S +L + G+++ +   +I+ L  YI ++K        G S
Sbjct: 553 -----SVTMEGLTLARSGWNSNMLGMFGMIMGLFLMIIVALSCYIVRSKKQ------GKS 601

Query: 294 HSKNDSFLSNVILPEKH-----VNVVAIPKIQENPVFNGS 328
            S       N +  + H      N+V   K+  N   NG+
Sbjct: 602 ASSGLGLGRNRVHSQAHSSVSSANLVTHEKLAGNGNGNGA 641


>gi|195504457|ref|XP_002099087.1| GE10726 [Drosophila yakuba]
 gi|194185188|gb|EDW98799.1| GE10726 [Drosophila yakuba]
          Length = 680

 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 117/341 (34%), Positives = 181/341 (53%), Gaps = 27/341 (7%)

Query: 2   INEDDFLQPITLVVRAIQYDNQDRYALATLIVSKAGT--SLRELQFSKNEYSVSALENLP 59
           I   D     TLVV+A Q DN DRYAL T+ +++ G+   L  L F +  + +   E+  
Sbjct: 209 IGYADVANGATLVVKATQIDNPDRYALTTVQLTRPGSHSDLSTLAFVQKRFVMRIREDTA 268

Query: 60  VNYVLLTVTTNKPRDLRVKYWLSNDYGERF-SISRQGDISLMQCLDYETEDSYRFTVYAT 118
           V   +L + TNKP    +KY +S+    +F S+   G++ L + LDYE    + F V AT
Sbjct: 269 VGNRILALPTNKPGK-HLKYIISDPVNSQFFSVGSLGELVLAKPLDYEKMTKHEFQVLAT 327

Query: 119 DTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL----ADLTPGSVIGKVEAADGD 174
           D +  ++A + + V++VNDW+PRFR   YE  +P        AD   G +IGKVEAADGD
Sbjct: 328 DGMTNSTAELTLEVIDVNDWEPRFRETHYEFMVPKSQALQSRADSFEGVLIGKVEAADGD 387

Query: 175 KGDRVTLSLRGPYEKMFSINDSGHISIV--DLSALNTSTIQLVVVATDTGNPPRQASVPA 232
           + D++ LSLRG +  +F I+ +G+I +    L +LN ST+ L+ +ATDTG PPR  SVP 
Sbjct: 388 RNDKLELSLRGQHAGLFEIDSTGNIYMRPEQLQSLNESTVHLIAIATDTGVPPRSTSVPV 447

Query: 233 IMHFPEAIVQQASSKLNSGTSSTVLIILGVVLIVLGFVIILLILYIHKNKHTKNNGPPGS 292
                 ++  +  +   SG +S +L + G+++ +   +I+ L  YI ++K        G 
Sbjct: 448 ------SVTMEGLTLARSGWNSNMLGMFGMIVGLFLMIIVALSCYIVRSKKQ------GK 495

Query: 293 SHSKNDSFLSNVILPEKH-----VNVVAIPKIQENPVFNGS 328
           S S       N +  + H      N+V   K+  N   NG+
Sbjct: 496 SASSGLGLGRNRVHSQAHSSVSSANLVTHEKLAGNGNGNGA 536


>gi|195107535|ref|XP_001998364.1| GI23670 [Drosophila mojavensis]
 gi|193914958|gb|EDW13825.1| GI23670 [Drosophila mojavensis]
          Length = 797

 Score =  179 bits (454), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 110/306 (35%), Positives = 173/306 (56%), Gaps = 17/306 (5%)

Query: 2   INEDDFLQPITLVVRAIQYDNQDRYALATLIVSKAGT--SLRELQFSKNEYSVSALENLP 59
           I   D     TLVV+A Q DN DRYAL T+ +++ GT   L  L F +  + +   E+  
Sbjct: 314 IGYSDLTHGATLVVKATQIDNPDRYALTTVQLTRPGTHSDLSSLAFVQKRFVMRIREDTA 373

Query: 60  VNYVLLTVTTNKPRDLRVKYWLSNDYGERF-SISRQGDISLMQCLDYETEDSYRFTVYAT 118
           V   +L + TNKP    +KY +++    +F SI   G++ L + LDYE    + F V A+
Sbjct: 374 VGNRILALPTNKPGK-HLKYTIADPINSQFFSIGSLGELVLAKPLDYEKMTKHEFQVIAS 432

Query: 119 DTLM-TTSATVNISVVNVNDWDPRFRYPQYELFLPHI----PLADLTPGSVIGKVEAADG 173
           D L  +T+A V + V++VNDW+PRFR   YE  +P         D   G +IGKVEAADG
Sbjct: 433 DGLTNSTTAEVTLEVIDVNDWEPRFRETHYEFVVPKSQSLQSRTDSFEGVLIGKVEAADG 492

Query: 174 DKGDRVTLSLRGPYEKMFSINDSGHISIV--DLSALNTSTIQLVVVATDTGNPPRQASVP 231
           D+ D++ LSLRG +  +F I+ +G+I +    L +LN ST+ L+ +ATD+G PPR  SVP
Sbjct: 493 DRNDKLELSLRGQHAGLFEIDATGNIYMRPEQLQSLNESTVHLIAIATDSGVPPRSTSVP 552

Query: 232 AIMHFPEAIVQQASSKLNSGTSSTVLIILGVVLIVLGFVIILLILYIHKNKHTKNNGPPG 291
                  ++  +  +   SG ++++L + G+++ +   +I+ L  YI ++K  + + P G
Sbjct: 553 V------SVTMEGLTLAQSGWNNSMLGMFGMIVGLFLLIIMALSCYIVRSKKQRKSSPGG 606

Query: 292 SSHSKN 297
            S  +N
Sbjct: 607 LSLGRN 612


>gi|195573781|ref|XP_002104870.1| GD18225 [Drosophila simulans]
 gi|194200797|gb|EDX14373.1| GD18225 [Drosophila simulans]
          Length = 680

 Score =  178 bits (452), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 116/341 (34%), Positives = 180/341 (52%), Gaps = 27/341 (7%)

Query: 2   INEDDFLQPITLVVRAIQYDNQDRYALATLIVSKAGT--SLRELQFSKNEYSVSALENLP 59
           I   D     TLVV+A Q DN DRYAL T+ +++ G+   L  L F +  + +   E+  
Sbjct: 209 IGYADVANGATLVVKATQIDNPDRYALTTVQLTRPGSHSDLSTLAFVQKRFVMRIREDTA 268

Query: 60  VNYVLLTVTTNKPRDLRVKYWLSNDYGERF-SISRQGDISLMQCLDYETEDSYRFTVYAT 118
           V   +L + TNKP    +KY + +    +F S+   G++ L + LDYE    + F V AT
Sbjct: 269 VGNRILALPTNKPGK-HLKYVIPDPVNSQFFSVGSLGELVLAEPLDYEKMTKHEFQVLAT 327

Query: 119 DTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHI----PLADLTPGSVIGKVEAADGD 174
           D +  ++A + + V++VNDW+PRFR   YE  +P        AD   G +IGKVEAADGD
Sbjct: 328 DGMTNSTAELTLEVIDVNDWEPRFRETHYEFMVPKSQSLQSRADSFEGVLIGKVEAADGD 387

Query: 175 KGDRVTLSLRGPYEKMFSINDSGHISIV--DLSALNTSTIQLVVVATDTGNPPRQASVPA 232
           + D++ LSLRG +  +F I+ +G+I +    L +LN ST+ L+ +ATDTG PPR  SVP 
Sbjct: 388 RNDKLELSLRGQHAGLFEIDSTGNIYMRPEQLQSLNESTVHLIAIATDTGVPPRSTSVPV 447

Query: 233 IMHFPEAIVQQASSKLNSGTSSTVLIILGVVLIVLGFVIILLILYIHKNKHTKNNGPPGS 292
                 ++  +  +   SG +S +L + G+++ +   +I+ L  YI ++K        G 
Sbjct: 448 ------SVTMEGLTLARSGWNSNMLGMFGMIMGLFLMIIVALSCYIVRSKKQ------GK 495

Query: 293 SHSKNDSFLSNVILPEKH-----VNVVAIPKIQENPVFNGS 328
           S S       N +  + H      N+V   K+  N   NG+
Sbjct: 496 SASSGLGLGRNRVHSQAHSSVSSANLVTHEKLAGNGNGNGA 536


>gi|281362552|ref|NP_651355.3| cadherin 96Cb, isoform B [Drosophila melanogaster]
 gi|272477166|gb|AAF56421.3| cadherin 96Cb, isoform B [Drosophila melanogaster]
          Length = 786

 Score =  178 bits (451), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 116/341 (34%), Positives = 180/341 (52%), Gaps = 27/341 (7%)

Query: 2   INEDDFLQPITLVVRAIQYDNQDRYALATLIVSKAGT--SLRELQFSKNEYSVSALENLP 59
           I   D     TLVV+A Q DN DRYAL T+ +++ G+   L  L F +  + +   E+  
Sbjct: 315 IGYADVANGATLVVKATQIDNPDRYALTTVQLTRPGSHSDLSTLAFVQKRFVMRIREDTA 374

Query: 60  VNYVLLTVTTNKPRDLRVKYWLSNDYGERF-SISRQGDISLMQCLDYETEDSYRFTVYAT 118
           V   +L + TNKP    +KY + +    +F S+   G++ L + LDYE    + F V AT
Sbjct: 375 VGNRILALPTNKPGK-HLKYVIPDPVNSQFFSVGSLGELVLAKPLDYEKMTKHEFQVLAT 433

Query: 119 DTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHI----PLADLTPGSVIGKVEAADGD 174
           D +  ++A + + V++VNDW+PRFR   YE  +P        AD   G +IGKVEAADGD
Sbjct: 434 DGMTNSTAELTLEVIDVNDWEPRFRETHYEFMVPKSQSLQSRADSFEGVLIGKVEAADGD 493

Query: 175 KGDRVTLSLRGPYEKMFSINDSGHISIV--DLSALNTSTIQLVVVATDTGNPPRQASVPA 232
           + D++ LSLRG +  +F I+ +G+I +    L +LN ST+ L+ +ATDTG PPR  SVP 
Sbjct: 494 RNDKLELSLRGQHAGLFEIDSTGNIYMRPEQLQSLNESTVHLIAIATDTGVPPRSTSVPV 553

Query: 233 IMHFPEAIVQQASSKLNSGTSSTVLIILGVVLIVLGFVIILLILYIHKNKHTKNNGPPGS 292
                 ++  +  +   SG +S +L + G+++ +   +I+ L  YI ++K        G 
Sbjct: 554 ------SVTMEGLTLARSGWNSNMLGMFGMIMGLFLMIIVALSCYIVRSKKQ------GK 601

Query: 293 SHSKNDSFLSNVILPEKH-----VNVVAIPKIQENPVFNGS 328
           S S       N +  + H      N+V   K+  N   NG+
Sbjct: 602 SASSGLGLGRNRVHSQAHSSVSSANLVTHEKLAGNGNGNGA 642


>gi|332028113|gb|EGI68164.1| Protocadherin Fat 4 [Acromyrmex echinatior]
          Length = 448

 Score =  178 bits (451), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 102/249 (40%), Positives = 146/249 (58%), Gaps = 13/249 (5%)

Query: 43  LQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYG--ERFSISRQGDISLM 100
           ++F       S  EN P   VLLT   NK  D  +K+WL       ERFSI+  G++ L 
Sbjct: 8   VKFVLKNQQTSVPENTPSGSVLLTAGVNKA-DSNLKFWLVGPVEDLERFSITNSGELILK 66

Query: 101 QCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLT 160
             LDYE    + F ++ TD     ++ VN+SV +VN+W+PRF+Y +YE F  H       
Sbjct: 67  GNLDYERRFQHSFLIHVTDGYHNDTSHVNVSVEDVNEWEPRFQYSRYE-FHAH----SAR 121

Query: 161 PGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSGHISIVDLSALNTSTIQLVVVATD 220
            GSV+GK+EAADGD+GD+V LSLRG   + F I D+G + +  L + N S  + + VATD
Sbjct: 122 EGSVVGKLEAADGDRGDKVNLSLRGQDARSFEIRDNGELVLRSLGSFNGSLARFIAVATD 181

Query: 221 TGNPPRQASVPAIMHFPEA----IVQQASSKLNSGTSSTVLIILGVVLIVLGFVIILLIL 276
           +G PPR + +P I+H P +    I  +A+     G+S  ++ I G VL +LG VI++LIL
Sbjct: 182 SGKPPRSSMIPVIVHIPNSGSLPIAARAAPAW-LGSSVLLVAIFGAVLGLLGVVILILIL 240

Query: 277 YIHKNKHTK 285
           YI+K+K  K
Sbjct: 241 YIYKHKRPK 249


>gi|195354822|ref|XP_002043895.1| GM17741 [Drosophila sechellia]
 gi|194129133|gb|EDW51176.1| GM17741 [Drosophila sechellia]
          Length = 809

 Score =  177 bits (450), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 107/305 (35%), Positives = 168/305 (55%), Gaps = 16/305 (5%)

Query: 2   INEDDFLQPITLVVRAIQYDNQDRYALATLIVSKAGT--SLRELQFSKNEYSVSALENLP 59
           I   D     TLVV+A Q DN DRYAL T+ +++ G+   L  L F +  + +   E+  
Sbjct: 338 IGYADVANGATLVVKATQIDNPDRYALTTVQLTRPGSHSDLSTLAFVQKRFVMRIREDTA 397

Query: 60  VNYVLLTVTTNKPRDLRVKYWLSNDYGERF-SISRQGDISLMQCLDYETEDSYRFTVYAT 118
           V   +L + TNKP    +KY + +    +F S+   G++ L + LDYE    + F V AT
Sbjct: 398 VGNRILALPTNKPGK-HLKYVIPDPVNSQFFSVGSLGELVLAKPLDYEKMTKHEFQVLAT 456

Query: 119 DTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHI----PLADLTPGSVIGKVEAADGD 174
           D +  ++A + + V++VNDW+PRFR   YE  +P        AD   G +IGKVEAADGD
Sbjct: 457 DGMTNSTAELTLEVIDVNDWEPRFRETHYEFMVPKSQSLQSRADSFEGVLIGKVEAADGD 516

Query: 175 KGDRVTLSLRGPYEKMFSINDSGHISIV--DLSALNTSTIQLVVVATDTGNPPRQASVPA 232
           + D++ LSLRG +  +F I+ +G+I +    L +LN ST+ L+ +ATDTG PPR  SVP 
Sbjct: 517 RNDKLELSLRGQHAGLFEIDSTGNIYMRPEQLQSLNESTVHLIAIATDTGVPPRSTSVPV 576

Query: 233 IMHFPEAIVQQASSKLNSGTSSTVLIILGVVLIVLGFVIILLILYIHKNKHTKNNGPPGS 292
                 ++  +  +   SG +S +L + G+++ +   +I+ L  YI ++K    +   G 
Sbjct: 577 ------SVTMEGLTLARSGWNSNMLGMFGMIMGLFLMIIVALSCYIVRSKKQGKSASSGL 630

Query: 293 SHSKN 297
              +N
Sbjct: 631 GLGRN 635


>gi|195390003|ref|XP_002053658.1| GJ23230 [Drosophila virilis]
 gi|194151744|gb|EDW67178.1| GJ23230 [Drosophila virilis]
          Length = 804

 Score =  177 bits (449), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 109/306 (35%), Positives = 173/306 (56%), Gaps = 17/306 (5%)

Query: 2   INEDDFLQPITLVVRAIQYDNQDRYALATLIVSKAGT--SLRELQFSKNEYSVSALENLP 59
           I   D     TLVV+A Q DN DRYAL T+ +++ GT   L  L F +  + +   E+  
Sbjct: 315 IGYADLTHGATLVVKATQIDNPDRYALTTVQLTRPGTHSDLSTLAFVQKRFVMRIREDTA 374

Query: 60  VNYVLLTVTTNKPRDLRVKYWLSNDYGERF-SISRQGDISLMQCLDYETEDSYRFTVYAT 118
           V   +L + TNKP    +KY +++    +F S+   G++ L + LDYE    + F V A+
Sbjct: 375 VGNRILALPTNKPGK-HLKYTIADPINSQFFSVGSLGELVLAKPLDYEKMTKHEFQVIAS 433

Query: 119 DTLM-TTSATVNISVVNVNDWDPRFRYPQYELFLPHI----PLADLTPGSVIGKVEAADG 173
           D L  +TSA V + V++VNDW+PRFR   YE  +P         D   G +IGKVEAADG
Sbjct: 434 DGLTNSTSADVTLEVIDVNDWEPRFRETHYEFMVPKSQSLQSRTDSFEGVLIGKVEAADG 493

Query: 174 DKGDRVTLSLRGPYEKMFSINDSGHISIV--DLSALNTSTIQLVVVATDTGNPPRQASVP 231
           D+ D++ LSLRG +  +F I+ +G+I +    L +LN ST+ L+ +ATD+G PPR  SVP
Sbjct: 494 DRNDKLELSLRGQHAGLFEIDATGNIYMRPEQLQSLNESTVHLIAIATDSGVPPRSTSVP 553

Query: 232 AIMHFPEAIVQQASSKLNSGTSSTVLIILGVVLIVLGFVIILLILYIHKNKHTKNNGPPG 291
                  ++  +  +  +S  ++++L + G+++ +   +I+ L  YI ++K  + + P G
Sbjct: 554 V------SVTMEGLTLAHSAWNNSMLGMFGMIVGLFLLIIMALSCYIVRSKKQRKSSPGG 607

Query: 292 SSHSKN 297
            S  +N
Sbjct: 608 LSLGRN 613


>gi|194908824|ref|XP_001981846.1| GG12277 [Drosophila erecta]
 gi|190656484|gb|EDV53716.1| GG12277 [Drosophila erecta]
          Length = 682

 Score =  175 bits (444), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 107/305 (35%), Positives = 167/305 (54%), Gaps = 16/305 (5%)

Query: 2   INEDDFLQPITLVVRAIQYDNQDRYALATLIVSKAGT--SLRELQFSKNEYSVSALENLP 59
           I   D     TLVV+A Q DN DRYAL T+ +++ G+   L  L F +  + +   E+  
Sbjct: 209 IGYADVANGATLVVKATQIDNPDRYALTTVQLTRPGSHSDLSTLAFVQKRFVMRIREDTA 268

Query: 60  VNYVLLTVTTNKPRDLRVKYWLSNDYGERF-SISRQGDISLMQCLDYETEDSYRFTVYAT 118
           V   +L + TNKP    +KY + +    +F S+   G++ L + LDYE    + F V AT
Sbjct: 269 VGNRILALPTNKPGK-HLKYIIPDPVNSQFFSVGSLGELVLAKPLDYEKMTKHEFQVLAT 327

Query: 119 DTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHI----PLADLTPGSVIGKVEAADGD 174
           D +  ++A + + V++VNDW+PRFR   YE  +P        AD   G +IGKVEAADGD
Sbjct: 328 DGMTNSTAELTLEVIDVNDWEPRFRETHYEFMVPKSQSLQSRADSFEGVLIGKVEAADGD 387

Query: 175 KGDRVTLSLRGPYEKMFSINDSGHISIV--DLSALNTSTIQLVVVATDTGNPPRQASVPA 232
           + D++ LSLRG +  +F I+  G+I +    L +LN ST+ L+ +ATDTG PPR  SVP 
Sbjct: 388 RNDKLELSLRGQHAGLFEIDSIGNIYMRPEQLQSLNESTVHLIAIATDTGVPPRSTSVPV 447

Query: 233 IMHFPEAIVQQASSKLNSGTSSTVLIILGVVLIVLGFVIILLILYIHKNKHTKNNGPPGS 292
                 ++  +  +   SG +S +L + G+++ +   +I+ L  YI ++K    +   G 
Sbjct: 448 ------SVTMEGLTLARSGWNSNMLGMFGMIVGLFLMIIVALSCYIVRSKKQGKSASSGL 501

Query: 293 SHSKN 297
              +N
Sbjct: 502 GLGRN 506


>gi|195055598|ref|XP_001994700.1| GH14626 [Drosophila grimshawi]
 gi|193892463|gb|EDV91329.1| GH14626 [Drosophila grimshawi]
          Length = 841

 Score =  175 bits (443), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 108/302 (35%), Positives = 170/302 (56%), Gaps = 17/302 (5%)

Query: 6   DFLQPITLVVRAIQYDNQDRYALATLIVSKAGT--SLRELQFSKNEYSVSALENLPVNYV 63
           D     TLVV+A Q DN DRYAL T+ ++++GT   L  L F +  + +   E+  V   
Sbjct: 358 DLTHGATLVVKATQIDNPDRYALTTVQLTRSGTHSDLSTLAFVQKRFVMRIREDTAVGNR 417

Query: 64  LLTVTTNKPRDLRVKYWLSNDYGERF-SISRQGDISLMQCLDYETEDSYRFTVYATDTLM 122
           +L + TNKP    +KY + +    +F S+   G++ L + LDYE    + F V A+D L 
Sbjct: 418 ILALPTNKPGK-HLKYTIVDPINSQFFSVGSLGELVLAKPLDYEKMTKHEFQVVASDGLT 476

Query: 123 -TTSATVNISVVNVNDWDPRFRYPQYELFLPHI----PLADLTPGSVIGKVEAADGDKGD 177
            +TSA V + V++VNDW+PRFR   YE  +P         D   G +IGKVEAADGD+ D
Sbjct: 477 NSTSADVTLEVIDVNDWEPRFRETHYEFVVPKSQSLQSRTDSFEGVLIGKVEAADGDRND 536

Query: 178 RVTLSLRGPYEKMFSINDSGHISIV--DLSALNTSTIQLVVVATDTGNPPRQASVPAIMH 235
           ++ LSLRG +  +F I+ +G+I +    L +LN ST+ L+ +A D+G PPR  SVP    
Sbjct: 537 KLELSLRGQHAGLFEIDATGNIYMRPEQLQSLNESTVHLIAIAMDSGVPPRSTSVPV--- 593

Query: 236 FPEAIVQQASSKLNSGTSSTVLIILGVVLIVLGFVIILLILYIHKNKHTKNNGPPGSSHS 295
              ++  +  +   S  +S++L + G+++ +   +I+ L  YI ++K  + + P G S  
Sbjct: 594 ---SVTMEGLTLAQSTWNSSMLGMFGMIVGLFLLIIMALSCYILRSKKQRKSSPGGLSLG 650

Query: 296 KN 297
           +N
Sbjct: 651 RN 652


>gi|195157936|ref|XP_002019850.1| GL12620 [Drosophila persimilis]
 gi|194116441|gb|EDW38484.1| GL12620 [Drosophila persimilis]
          Length = 684

 Score =  174 bits (442), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 102/280 (36%), Positives = 161/280 (57%), Gaps = 16/280 (5%)

Query: 12  TLVVRAIQYDNQDRYALATLIVSKAGT--SLRELQFSKNEYSVSALENLPVNYVLLTVTT 69
           TLVV+A Q DN DRYAL T+ +++ G+   L  L F +  + +   E+  V   +L + T
Sbjct: 215 TLVVKATQIDNPDRYALTTVQLTRPGSHSDLSTLSFVQKRFVMRIREDTAVGNRILALPT 274

Query: 70  NKPRDLRVKYWLSNDYGERF-SISRQGDISLMQCLDYETEDSYRFTVYATDTLMTTSATV 128
           NKP    +KY + +    +F S+   G++ L + LDYE    + F V ATD +  ++A +
Sbjct: 275 NKPGK-HLKYTIPDPVNSQFFSVGSLGELVLAKPLDYEKMTKHEFQVLATDGMTNSTAEL 333

Query: 129 NISVVNVNDWDPRFRYPQYELFLPHI----PLADLTPGSVIGKVEAADGDKGDRVTLSLR 184
            + V++VNDW+PRFR   YE  +P         D   G +IGKVEAADGD+ D++ LSLR
Sbjct: 334 TLEVIDVNDWEPRFRETHYEFMVPKSQSLQSRTDTFEGVLIGKVEAADGDRNDKLELSLR 393

Query: 185 GPYEKMFSINDSGHISIV--DLSALNTSTIQLVVVATDTGNPPRQASVPAIMHFPEAIVQ 242
           G +  +F I+ +G+I +    L +LN ST+ L+ +ATDTG PPR  SVP       ++  
Sbjct: 394 GQHAGLFEIDATGNIYMRPEQLQSLNESTVHLIAIATDTGVPPRSTSVPV------SVTM 447

Query: 243 QASSKLNSGTSSTVLIILGVVLIVLGFVIILLILYIHKNK 282
           +  +   SG +S +L + G+++ +   +I+ L  YI ++K
Sbjct: 448 EGLTLAQSGWNSNMLGMFGMIVGLFLMIILALTCYIVRSK 487


>gi|195451366|ref|XP_002072885.1| GK13841 [Drosophila willistoni]
 gi|194168970|gb|EDW83871.1| GK13841 [Drosophila willistoni]
          Length = 684

 Score =  174 bits (441), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 114/322 (35%), Positives = 177/322 (54%), Gaps = 21/322 (6%)

Query: 2   INEDDFLQPITLVVRAIQYDNQDRYALATLIVSKAGT--SLRELQFSKNEYSVSALENLP 59
           I   D     TLVV+A Q DN DRYAL T+ +++ GT   L  L F +  + +   E+  
Sbjct: 213 IGYADVAHGATLVVKATQIDNPDRYALTTVQLTRPGTHSELSTLSFVQKRFVMRIREDTA 272

Query: 60  VNYVLLTVTTNKPRDLRVKYWLSNDYGERF-SISRQGDISLMQCLDYETEDSYRFTVYAT 118
           V   +L + TNKP    +KY + +    +F ++   G++ L + LDYE    + F V AT
Sbjct: 273 VGNRILALPTNKPGK-HLKYTIPDPINSQFFNVGSLGELVLAKPLDYEKMTKHEFQVQAT 331

Query: 119 DTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLT---PGSVIGKVEAADGDK 175
           D +  T+A + + V++VNDW+PRFR   YE  +P   L   T    G +IGKVEAADGD+
Sbjct: 332 DGMTNTTAELTLEVIDVNDWEPRFRETHYEFMVPKSSLQSRTDSFEGVLIGKVEAADGDR 391

Query: 176 GDRVTLSLRGPYEKMFSINDSGHISIV--DLSALNTSTIQLVVVATDTGNPPRQASVPAI 233
            D++ LSLRG +  +F I+ +G+I +    +  LN ST+ L+ +ATDTG PPR  SVP  
Sbjct: 392 NDKLELSLRGQHAGLFEIDATGNIYMRPEQMQNLNESTVHLIAIATDTGVPPRSTSVPV- 450

Query: 234 MHFPEAIVQQASSKLNSGTSSTVLIILGVVLIVLGFVIILLILYIHKNKHTKNNGPPGSS 293
                  ++  S   ++  SS++L + G+++ +   +I+ L  YI ++ + K  G P   
Sbjct: 451 ----SVTMEGLSLAQSAWNSSSMLGMFGMIVGLFLLIILALSCYIVRSNN-KGKGSPSLG 505

Query: 294 ----HSKNDSFLS--NVILPEK 309
               HS+  S +S  N++  EK
Sbjct: 506 RNRVHSQAHSSVSSANLVTHEK 527


>gi|390179570|ref|XP_001359996.3| GA10308 [Drosophila pseudoobscura pseudoobscura]
 gi|388859899|gb|EAL29148.3| GA10308 [Drosophila pseudoobscura pseudoobscura]
          Length = 794

 Score =  174 bits (441), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 102/280 (36%), Positives = 161/280 (57%), Gaps = 16/280 (5%)

Query: 12  TLVVRAIQYDNQDRYALATLIVSKAGT--SLRELQFSKNEYSVSALENLPVNYVLLTVTT 69
           TLVV+A Q DN DRYAL T+ +++ G+   L  L F +  + +   E+  V   +L + T
Sbjct: 325 TLVVKATQIDNPDRYALTTVQLTRPGSHSDLSTLSFVQKRFVMRIREDTAVGNRILALPT 384

Query: 70  NKPRDLRVKYWLSNDYGERF-SISRQGDISLMQCLDYETEDSYRFTVYATDTLMTTSATV 128
           NKP    +KY + +    +F S+   G++ L + LDYE    + F V ATD +  ++A +
Sbjct: 385 NKPGK-HLKYTIPDPVNSQFFSVGSLGELVLAKPLDYEKMTKHEFQVLATDGMTNSTAEL 443

Query: 129 NISVVNVNDWDPRFRYPQYELFLPHI----PLADLTPGSVIGKVEAADGDKGDRVTLSLR 184
            + V++VNDW+PRFR   YE  +P         D   G +IGKVEAADGD+ D++ LSLR
Sbjct: 444 TLEVIDVNDWEPRFRETHYEFMVPKSQSLQSRTDTFEGVLIGKVEAADGDRNDKLELSLR 503

Query: 185 GPYEKMFSINDSGHISIV--DLSALNTSTIQLVVVATDTGNPPRQASVPAIMHFPEAIVQ 242
           G +  +F I+ +G+I +    L +LN ST+ L+ +ATDTG PPR  SVP       ++  
Sbjct: 504 GQHAGLFEIDATGNIYMRPEQLQSLNESTVHLIAIATDTGVPPRSTSVPV------SVTM 557

Query: 243 QASSKLNSGTSSTVLIILGVVLIVLGFVIILLILYIHKNK 282
           +  +   SG +S +L + G+++ +   +I+ L  YI ++K
Sbjct: 558 EGLTLAQSGWNSNMLGMFGMIVGLFLMIILALTCYIVRSK 597


>gi|194741038|ref|XP_001952996.1| GF17436 [Drosophila ananassae]
 gi|190626055|gb|EDV41579.1| GF17436 [Drosophila ananassae]
          Length = 784

 Score =  171 bits (433), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 101/282 (35%), Positives = 159/282 (56%), Gaps = 16/282 (5%)

Query: 6   DFLQPITLVVRAIQYDNQDRYALATLIVSKAGT--SLRELQFSKNEYSVSALENLPVNYV 63
           D     TLVV+A Q DN DRYAL T+ +++ G+   L  L F +  + +   E+  V   
Sbjct: 305 DVANGATLVVKATQIDNPDRYALTTVQLTRPGSHSDLSTLAFVQKRFVMRIREDTAVGNR 364

Query: 64  LLTVTTNKPRDLRVKYWLSNDYGERF-SISRQGDISLMQCLDYETEDSYRFTVYATDTLM 122
           +L + TNKP    +KY + +    +F S+   G++ L + LDYE    + F V ATD + 
Sbjct: 365 ILALPTNKPGK-HLKYTIPDPVNSQFFSVGSLGELVLAKPLDYEKMTKHEFQVQATDGMT 423

Query: 123 TTSATVNISVVNVNDWDPRFRYPQYELFLPHI----PLADLTPGSVIGKVEAADGDKGDR 178
            ++A + + V++VNDW+PRFR   YE  +P         D   G ++GKVEAADGD+ D+
Sbjct: 424 NSTAELTLEVIDVNDWEPRFRETHYEFMVPKSQSLQSRVDSFDGVLVGKVEAADGDRNDK 483

Query: 179 VTLSLRGPYEKMFSINDSGHISIV--DLSALNTSTIQLVVVATDTGNPPRQASVPAIMHF 236
           + LSLRG +  +F I+ +G+I +    L +LN ST+ L+ +ATDTG PPR  SVP     
Sbjct: 484 LELSLRGQHAGLFEIDSTGNIYMRPEQLQSLNESTVHLIAIATDTGVPPRSTSVPV---- 539

Query: 237 PEAIVQQASSKLNSGTSSTVLIILGVVLIVLGFVIILLILYI 278
             ++  +  +   SG +S +L + G+++ +   +I+ L  YI
Sbjct: 540 --SVTMEGLTLARSGWNSNMLGMFGMIVGLFLMIIVALSCYI 579


>gi|391336187|ref|XP_003742463.1| PREDICTED: protocadherin Fat 1-like [Metaseiulus occidentalis]
          Length = 721

 Score =  154 bits (390), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 106/334 (31%), Positives = 177/334 (52%), Gaps = 27/334 (8%)

Query: 10  PITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTT 69
           PI LVVRA Q +++++++L TL V+ +     EL+F + EY V  +E+ P   V+L + T
Sbjct: 314 PIVLVVRATQRNDEEKFSLTTLTVASSEFLPHELKFFQREYVVPLVESTPPGQVILRLQT 373

Query: 70  NKPRDLRVKYWLSNDYGER----FSISRQGDISLMQCLDYETEDSYRFTVYATDTLMTTS 125
            K  +  +K+ L  +  ER    FS+  +G+I L + +DYE    Y    + TD     S
Sbjct: 374 TKSTENNLKFQLVAE-DERNVATFSMGAKGEIYLQKSIDYEVRREYILKAFVTDGKDRDS 432

Query: 126 ATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRG 185
             +N++++N ND DP F +PQY   +P    ++  PG ++GKV+  DGD  D+++ SL G
Sbjct: 433 TRINVTILNANDNDPVFEFPQYTFIMP----SNAKPGELVGKVKCTDGDLDDKISYSLEG 488

Query: 186 PYEKMFSINDSGHISIVDLSALNTSTIQLVVVATDTGNPPRQASVPAIMHFPEAIVQQAS 245
           P    F +ND G I + +   +N ++  ++VVA D G PPR+++    +  PE  +  A+
Sbjct: 489 PNSNAFYVNDRGEIRLKNADQVNVTS-HMIVVAIDNGVPPRRSTSLVTVRLPE--IAAAA 545

Query: 246 SKLNSGTSSTVLIILGVVLIVLGFVIILLILYIHKNKHTKN--------NGPPGSSHSKN 297
           S L   ++  +    GV+L +L  +II ++ YI KNK  +N        NG  G    + 
Sbjct: 546 SGLFRNSALILPAAFGVILGILVLIIITMVFYILKNKKYRNHLPVVIDGNGLNGGPPPRP 605

Query: 298 DSFLSNVILPEKHVNVVAIPKIQENPVFNGSQEE 331
               + V+ P++       P   ENP+F   +E+
Sbjct: 606 TLEPNKVVGPKR-------PPGVENPMFTNERED 632



 Score = 40.8 bits (94), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 72/162 (44%), Gaps = 17/162 (10%)

Query: 91  ISRQGDISLMQCLDYETEDSYR-FT---VYATDTLMTTSATVNISVVNVNDWDPRFRYPQ 146
           + R   + L + LD E ED  + FT   V A    +T S  + I V +VND  P+F+   
Sbjct: 75  VFRNKSLILQKKLDKEGEDGLKDFTAEAVCAPQNDLTISIPIRIIVTDVNDNAPKFQGVP 134

Query: 147 YELFLPHIPLADLTPGSVI--GKVEAADGDK-GDRVTLSL---RGPYEKMFSINDS--GH 198
           Y L +         PGS+I  G + A D D+ G   T+     R  + K  +  +S  G 
Sbjct: 135 YSLNVSEA----TVPGSIISQGLIRAVDADQPGTYSTVEYFIERSEFSKFVAFENSLEGT 190

Query: 199 ISIVD-LSALNTSTIQLVVVATDTGNPPRQASVPAIMHFPEA 239
           +++V+ L    T    + +   D GNPP  +     +H  +A
Sbjct: 191 LTLVEKLDFETTPMFNVTIRVQDQGNPPMVSRTNLTIHVVDA 232


>gi|241156890|ref|XP_002407884.1| protocadherin beta-6, putative [Ixodes scapularis]
 gi|215494247|gb|EEC03888.1| protocadherin beta-6, putative [Ixodes scapularis]
          Length = 577

 Score =  154 bits (390), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 103/261 (39%), Positives = 143/261 (54%), Gaps = 14/261 (5%)

Query: 7   FLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLT 66
           F  P+TLVVRA Q DN DR+ L TL ++       EL F  + Y    LE+ P   ++L 
Sbjct: 305 FALPVTLVVRATQKDNADRFTLTTLTLTGDKFLPHELHFLNSHYEARVLESTPPGQIVLL 364

Query: 67  VTTNKPRDLR-VKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDTLMTTS 125
           +    P   + V++ L  +  + F+I   G+I L + LDYE +  Y   V ATD      
Sbjct: 365 MQC--PIYFQSVQFQLLENEDDMFAIQPTGEIILARHLDYEMKQDYTLQVLATDGKYNDV 422

Query: 126 ATVNISVVNVNDWDPRFRYPQYELFL--PHIPLADLTPGSVIGKVEAADGDKGDRVTLSL 183
           A VN+SV+NVND DP+FR  +Y   +  PHI       G +IGKV+A D D  D V LS+
Sbjct: 423 ARVNVSVINVNDNDPQFRQGRYSFMVTDPHI-----KKGELIGKVDAVDADSNDTVQLSI 477

Query: 184 RGPYEKMFSINDSGHISIVDLSALNTSTIQLVVVATDTGNPPRQASVPAIMHFPEAIVQQ 243
            GP  ++F IN+ G + I DL  LN++T  LVVVATD G PPR+++    + FPE  V  
Sbjct: 478 DGPSARLFMINNRGEVRIRDLEFLNSTTSHLVVVATDDGVPPRKSTALVEVKFPEEAVVL 537

Query: 244 AS---SKLNSGTSSTVLIILG 261
            S    K + G S  ++I+ G
Sbjct: 538 GSVLAPKKDEG-SFILMIVFG 557


>gi|157115690|ref|XP_001652662.1| cadherin, putative [Aedes aegypti]
 gi|108876809|gb|EAT41034.1| AAEL007299-PA [Aedes aegypti]
          Length = 673

 Score =  148 bits (374), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 108/312 (34%), Positives = 163/312 (52%), Gaps = 38/312 (12%)

Query: 10  PITLVVRAIQYDNQDRYALATLIVSKAGTSLRE----LQFSKNEYSVSALENL-PVNYVL 64
           PITLVV+A Q DN DRYAL+T+I+S+  +++ E      F ++ Y +   EN  P + +L
Sbjct: 312 PITLVVKATQLDNNDRYALSTVILSQKQSTVVETVDKASFMQSTYRLKIKENYNPGSTIL 371

Query: 65  LTVTTNKPRDLRVK-------YWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYA 117
             +  N   +  ++       YW        FSI R G+I L + LD+ET+ +++FTV  
Sbjct: 372 KLIKGNMAWNANLRILNDTELYW--------FSIDRNGNIKLSRWLDFETKPTHKFTVEL 423

Query: 118 TDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPH----IPLADLTPGSVIGKVEAADG 173
            D      A V + V++VNDW+PRFR P Y   + +     PLA       +GKVEAADG
Sbjct: 424 NDGSNREYAEVLVEVLDVNDWEPRFRKPHYTFKIRNRNFSTPLA-------LGKVEAADG 476

Query: 174 DKGDRVTLSLRGPYEKMFSINDSGHISIVDLSALNTSTIQLVVVATDTGNPPRQASVPAI 233
           D  D++T SLRG +  +F + DSG    +     +    +L ++ATDTG PP+   VP  
Sbjct: 477 DVRDKITYSLRGDHANLFYV-DSGGTVWLKYDVPDKMNFKLHIIATDTGFPPKSTIVPLT 535

Query: 234 MHFPEAIVQQASSKLNSGTSSTVLIILGV-VLIVLGFVIILLILYIHKNKHTKNNGPPGS 292
           + F E  + +++ K    T++T+  + GV VL VL F+ +L             N P   
Sbjct: 536 VDFDE--ITESAIKW---TTTTISALAGVTVLCVLAFLAVLTYFCRSSVNRPNRNVPMLI 590

Query: 293 SHSKNDSFLSNV 304
           S SK  +  SN+
Sbjct: 591 SRSKASNKTSNI 602


>gi|170034904|ref|XP_001845312.1| protocadherin beta 9 [Culex quinquefasciatus]
 gi|167876605|gb|EDS39988.1| protocadherin beta 9 [Culex quinquefasciatus]
          Length = 722

 Score =  143 bits (361), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 96/274 (35%), Positives = 153/274 (55%), Gaps = 18/274 (6%)

Query: 11  ITLVVRAIQYDNQDRYALATLIVSKAGTSLR---ELQFSKNEYSVSALENLPVNYVLLTV 67
           ITLV++A Q DN DRYAL+T+I+S      R   E    +  Y  +  EN P+ + +L +
Sbjct: 333 ITLVIKATQKDNADRYALSTVILSCPTAVPRTNIEPTTPRLVYRATVKENFPLGHSILNL 392

Query: 68  TTNKPRDLRVKYWLSNDYGER--FSISRQGDISLMQCLDYETEDSYRFTVYATD-TLMTT 124
             NK      KY + N+  ER  FS+  + +I L++ LDYE+  +++FTV   D + +  
Sbjct: 393 GLNK-EAPNFKYTIVNE-AERQWFSVDNKFNIILIKALDYESNRNHKFTVELFDNSKLLA 450

Query: 125 SATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSV-IGKVEAADGDKGDRVTLSL 183
           +A + I V +VNDWDPRFR PQY     +   AD     V +G VEAADGD  D VT S+
Sbjct: 451 TAEIFIEVTDVNDWDPRFRKPQYVFTADN---ADQIQSPVLLGIVEAADGDPNDVVTYSI 507

Query: 184 RGPYEKMFSINDSGHISIVDLSALNTSTIQLVVVATDTGNPPRQASVPAIMHFPEAIVQQ 243
            G    +FS++  G I +   +  + + + L + A+D+GNPP++ +VP  + FP      
Sbjct: 508 HGEEANLFSVDSRGGIWL-KRNLTHKNALNLFLTASDSGNPPKRTTVPLQIRFP-----N 561

Query: 244 ASSKLNSGTSSTVLIILGVVLIVLGFVIILLILY 277
           A S  ++G + T++ +L + + +L   ++ L +Y
Sbjct: 562 ARSTTSAGWTPTIIGLLAIAVAILTLTVLTLYIY 595


>gi|312384594|gb|EFR29288.1| hypothetical protein AND_01906 [Anopheles darlingi]
          Length = 657

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 87/298 (29%), Positives = 145/298 (48%), Gaps = 35/298 (11%)

Query: 12  TLVVRAIQYDNQDRYALATLIVSKAGT---------------SLRELQFSKNEYSVSALE 56
           TLVV+A Q DN DRYAL T+++S                   S+   +F++  +  +  E
Sbjct: 295 TLVVKATQVDNPDRYALTTVVLSSPKQQTPDSSASNVVNVQPSIGGAEFARGTFYATVRE 354

Query: 57  NLPVNYVL--LTVTTNKPRDLRVKYWL--SNDYGERFSISRQGDISLMQCLDYETEDSYR 112
           +     ++  LT     P   +++Y +  S    E+F I   G+I L++ L +     Y 
Sbjct: 355 DSRPGTLISQLTGAQGSPNVGQLRYAIVGSTVAQEQFRIGPAGEIILVKPLTFRRTPQYA 414

Query: 113 FTVYATDTL---MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVE 169
           FTV A D        S +V I V+  N W+PRFR P Y  F+   PL       ++G++E
Sbjct: 415 FTVDAFDDRSGGRNFSTSVVIDVLPANVWEPRFRKPFYS-FVIDSPLQTQQLPMLVGRIE 473

Query: 170 AADGDKGDRVTLSLRGPYEKMFSINDSGHISIVDLSALNTSTIQLVVVATDTGNPPRQAS 229
           AADGD+ D +T +L+G Y  +F  +  G++ +V         ++L+   TD+G PP+ A+
Sbjct: 474 AADGDRTDELTFALKGNYSNLFRADPYGNLWLVSNRTDLPVAMRLLATVTDSGTPPKSAT 533

Query: 230 VPAIMHF-PEAIVQQASSKLNSGTSSTVLIILGVVLIVLGFVII-LLILYIHKNKHTK 285
           VP ++   PE           +  +S +L+I  VV  +LG +++   I  I++ +  K
Sbjct: 534 VPVVVKLRPE----------TASLTSNLLVINIVVACILGALLLGGCIRCIYRRRKRK 581


>gi|347970216|ref|XP_313367.4| AGAP003607-PA [Anopheles gambiae str. PEST]
 gi|333468828|gb|EAA08904.4| AGAP003607-PA [Anopheles gambiae str. PEST]
          Length = 746

 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 75/246 (30%), Positives = 125/246 (50%), Gaps = 20/246 (8%)

Query: 12  TLVVRAIQYDNQDRYALATLIVS---KAGTSLREL---------QFSKNEYSVSALENL- 58
           T+VV+A Q DN DRYAL T+I++    + TSL  +         +F +  + V+  E+  
Sbjct: 326 TIVVKATQVDNPDRYALTTVILAPPKGSETSLSAMSVQPPVGGAEFVRGTFYVTVREDAA 385

Query: 59  PVNYVLLTVTTNKPR-DLRVKYWL--SNDYGERFSISRQGDISLMQCLDYETEDSYRFTV 115
           P   V   V     R D  V+Y +  S    E+F +   G++ L + L+Y     Y F +
Sbjct: 386 PGTKVSQLVPGGGGRADEPVRYRIVGSPLAQEQFRVGPGGELMLARSLNYRRTSQYTFAI 445

Query: 116 YAT--DTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADG 173
            ++       TS TV + V+  N W+PRFR P Y   + + PL       ++G++EAADG
Sbjct: 446 ESSLPGGERNTSTTVVVDVLPANMWEPRFRKPFYSFAIEN-PLHAQQLPMLVGRIEAADG 504

Query: 174 DKGDRVTLSLRGPYEKMFSINDSGHISIVDLSALNTSTIQLVVVATDTGNPPRQASVPAI 233
           D+ D ++  L+G Y  +F ++  G++ +V         ++L+   TD+G P + A+VP +
Sbjct: 505 DRTDELSFVLKGNYSNLFRVDPYGNLWLVSNRTDLPLAMRLLATVTDSGTPQKSATVPVV 564

Query: 234 MHF-PE 238
           +   PE
Sbjct: 565 VKLKPE 570


>gi|357610242|gb|EHJ66890.1| hypothetical protein KGM_21712 [Danaus plexippus]
          Length = 4656

 Score = 89.4 bits (220), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 68/241 (28%), Positives = 120/241 (49%), Gaps = 30/241 (12%)

Query: 13   LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFS------------KNEYSVSALENLPV 60
            LV RA+  + +  Y+L+        T+   +  +            ++ Y V   E+ P 
Sbjct: 3093 LVARALDRETEPAYSLSVAATDGKFTAYTAVHITIIDVNDNPPYCVRHRYRVRLSEDAPR 3152

Query: 61   NYVLLTVTT---NKPRDLRVKYWLSNDYGERFSISRQ-GDISLMQCLDYETEDSYRFTVY 116
               L+++ T   ++P++ R++Y+L+ +  E F+I ++ G +S+   LD ET  +YR T +
Sbjct: 3153 GTRLVSLLTRDDDEPQNARLRYFLTGEQAEHFTIHKEMGAVSVAAPLDRETRSTYRLTAH 3212

Query: 117  ATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADG 173
            A D   +    S+ + +++ ++ND  PRF  P Y + LP     D   G+++ KV A D 
Sbjct: 3213 AQDRERSEWACSSEIEVTLDDINDNAPRFSAPLYSVTLPE----DAELGTLVAKVHATDD 3268

Query: 174  DKGDR--VTLSLRGPYEKMFSINDSGHISIVDLSALNTSTI---QLVVVATDTGNPPRQA 228
            D G+   +  S   P E      DSG I++   +AL+  T    +L+V A+D G PPR A
Sbjct: 3269 DLGENRLIRYSFVEPTEAFELTADSGIITL--RTALDRETRAEHRLLVRASDAGQPPRSA 3326

Query: 229  S 229
            +
Sbjct: 3327 T 3327



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 68/230 (29%), Positives = 107/230 (46%), Gaps = 17/230 (7%)

Query: 13   LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALE-NLPVNYVLLTVTTNK 71
            L+VRA       R A +T+ ++ A  +    +F    Y  +  E + P   V+  + T++
Sbjct: 3312 LLVRASDAGQPPRSATSTVRLTVADVNDNPPEFEFQHYHAAVPEIDAPGTEVVRVMATSR 3371

Query: 72   PRDLRVKYWLS---NDYGERFSISRQ-GDISLMQCLDYETEDSYRFTVYATD---TLMTT 124
               +    + S    D  E FS++R  G +S+ + LDYE    Y  TV A D     ++ 
Sbjct: 3372 DTGVNADVYYSLVGGDDREDFSVNRSTGIVSIARPLDYERRKEYYLTVQAVDGGSPPLSD 3431

Query: 125  SATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGD--RVTLS 182
             AT+NI++++ ND  P F    Y   +      D   G  I +V A D D G   RVT S
Sbjct: 3432 HATINITIMDSNDNPPVFSQTSYGAKVRE----DAGVGVRIVQVIADDADAGTNGRVTYS 3487

Query: 183  L-RGPYEKMFSIN-DSGHISIVD-LSALNTSTIQLVVVATDTGNPPRQAS 229
            + RG  +  F+I+ D+G+IS+   L   +     L V A D G P  +A+
Sbjct: 3488 IARGDPDNCFTIDADTGYISVSSRLDRESKPAYVLEVRARDRGLPALEAT 3537



 Score = 52.0 bits (123), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 47/139 (33%), Positives = 66/139 (47%), Gaps = 12/139 (8%)

Query: 95   GDISLMQCLDYETEDSYRFTVYATDTLM---TTSATVNISVVNVNDWDPRFRYPQYELFL 151
            G I+L   LD ET   +R  V A+D      + ++TV ++V +VND  P F +  Y   +
Sbjct: 3294 GIITLRTALDRETRAEHRLLVRASDAGQPPRSATSTVRLTVADVNDNPPEFEFQHYHAAV 3353

Query: 152  PHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKM-FSINDS-GHISIV-DLSA 206
            P I      PG+ + +V A   D G    V  SL G  ++  FS+N S G +SI   L  
Sbjct: 3354 PEID----APGTEVVRVMATSRDTGVNADVYYSLVGGDDREDFSVNRSTGIVSIARPLDY 3409

Query: 207  LNTSTIQLVVVATDTGNPP 225
                   L V A D G+PP
Sbjct: 3410 ERRKEYYLTVQAVDGGSPP 3428



 Score = 51.2 bits (121), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 57/219 (26%), Positives = 95/219 (43%), Gaps = 35/219 (15%)

Query: 12   TLVVRAIQYDN------QDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLL 65
            +LVVR + YD+      Q+ Y+      + AGT +  L    ++ S       P++Y   
Sbjct: 3022 SLVVRLVDYDDCPPRFTQEIYSAEVREDAAAGTVVTRLMVQDDDVS-----GAPLSYF-- 3074

Query: 66   TVTTNKPRDLRVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDTLMTTS 125
             V+   PR              RF +   G++ + + LD ETE +Y  +V ATD   T  
Sbjct: 3075 -VSAGDPR-------------ARFQVRASGELLVARALDRETEPAYSLSVAATDGKFTAY 3120

Query: 126  ATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGD--KGDRVTLSL 183
              V+I++++VND  P     +Y + L      D   G+ +  +   D D  +  R+   L
Sbjct: 3121 TAVHITIIDVNDNPPYCVRHRYRVRLSE----DAPRGTRLVSLLTRDDDEPQNARLRYFL 3176

Query: 184  RGPYEKMFSIN-DSGHISI-VDLSALNTSTIQLVVVATD 220
             G   + F+I+ + G +S+   L     ST +L   A D
Sbjct: 3177 TGEQAEHFTIHKEMGAVSVAAPLDRETRSTYRLTAHAQD 3215



 Score = 49.7 bits (117), Expect = 0.002,   Method: Composition-based stats.
 Identities = 58/204 (28%), Positives = 89/204 (43%), Gaps = 21/204 (10%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLR----VKYWLSNDYGERFSI---SRQGD 96
            +FS + YS    E++P+  ++  +    P DL     V Y L +   +  +    S  G 
Sbjct: 997  KFSLSAYSARIREDVPIGTLVAVLEAFDP-DLGAGGIVSYSLPDQSADDITFTVDSTSGT 1055

Query: 97   ISLMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNV--NDWDPRFRYPQYELFL 151
            +   + LD+E    Y  TV ATD     M + AT+ + V +V  N + P F   + +   
Sbjct: 1056 LRTAKQLDFEERQVYGVTVRATDGGRPAMWSEATLIVEVADVDENAYTPVF--AERQALS 1113

Query: 152  PHIPLADLTPGSVIGKVEAADGDKGDRVT----LSLRGPYEKMFSINDSGHI-SIVDLSA 206
              +P  D  PG+V+    A D D   R +      + G  +  FSI+D+G I S   L  
Sbjct: 1114 ASVP-EDAPPGTVVLSAAATDADPPGRDSRLAYYIVAGSGKAHFSIDDTGVIRSQTPLDR 1172

Query: 207  LNTSTIQLVVVATDTGNPPRQASV 230
              T+   L V A D G  PR + V
Sbjct: 1173 ETTAHYWLTVCAQDHGLVPRHSCV 1196



 Score = 43.5 bits (101), Expect = 0.15,   Method: Composition-based stats.
 Identities = 48/167 (28%), Positives = 73/167 (43%), Gaps = 18/167 (10%)

Query: 72   PRDLRVKYWLSNDYGERFSIS-RQGDISLMQCLDYETEDSYRFTVYATDTLMTTSA--TV 128
            P + ++ Y L +   + F I    G +     LD+ET   +  TV ATD +    A   +
Sbjct: 2325 PLNRQLIYTLHDSPDDLFEIHFDTGTLVARAALDHETACEHSLTVRATDGVTGAFADLAL 2384

Query: 129  NISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGD--RVTLSLR-- 184
             ++V +VND  P F   +Y   +          G  + +V A D D GD   VT SL   
Sbjct: 2385 TLTVTDVNDCAPEFDTDEYRAGVSEAAAV----GDAVLRVRATDADAGDNGNVTYSLSAW 2440

Query: 185  GP-----YEKMFSIND-SGHISIV-DLSALNTSTIQLVVVATDTGNP 224
            GP      E  F+++  +G +S+   L     +   L+V ATD G P
Sbjct: 2441 GPEGETGEELAFAVDPATGEVSVAGQLDRERRTAHHLLVTATDGGRP 2487



 Score = 41.2 bits (95), Expect = 0.81,   Method: Composition-based stats.
 Identities = 52/194 (26%), Positives = 80/194 (41%), Gaps = 19/194 (9%)

Query: 43   LQFSKNEYSVSALENL--PVNYVLLTV---TTNKPRDLRVKYWLSNDYGERFSISRQGDI 97
            L F K +Y  S +EN   P    +L V     N+    R+   L+   G    ++     
Sbjct: 2090 LAFQKADYYGSVVENTTKPATIAVLNVLGAALNEHVAFRI---LNPVEGFEVGLTSGAVR 2146

Query: 98   SLMQCLDYETEDSYRFTVYATDT----LMTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
            S    LD E  DSY   + A          + A V+I+V +VND  P F    Y   +  
Sbjct: 2147 STGVALDREERDSYTLLLQARSAGGGAERVSHARVHIAVTDVNDNCPVFTERPYIAAV-- 2204

Query: 154  IPLADLTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSIN-DSGHISIVDLSALNTS 210
              LA   PG+ + +V A D D  D   V   ++  + ++F ++  SG I++      +  
Sbjct: 2205 --LAGAEPGAPVLRVHAVDADANDNGEVRYEMKRGHGELFRVDRRSGQITLKQTLDAHNQ 2262

Query: 211  TIQLVVVATDTGNP 224
               LV+ A D G P
Sbjct: 2263 LYSLVIAAFDGGTP 2276



 Score = 40.0 bits (92), Expect = 2.1,   Method: Composition-based stats.
 Identities = 46/157 (29%), Positives = 68/157 (43%), Gaps = 14/157 (8%)

Query: 77   VKYWLSNDYGERFSISRQGDISLMQC--LDYETEDSYRFTVYATDTL-MTTSATVNISVV 133
            V Y LS    + F I R+  + L+ C  LD E    Y  T+ ATD   +   A V ++V 
Sbjct: 931  VTYTLSGGGEDEFCIDRESGV-LLVCAPLDRERRALYEITIRATDGGGLRAEALVRVAVD 989

Query: 134  NVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSI 193
            +VND  P+F    Y   +      D+  G+++  +EA D D G    +S   P +    I
Sbjct: 990  DVNDNAPKFSLSAYSARIRE----DVPIGTLVAVLEAFDPDLGAGGIVSYSLPDQSADDI 1045

Query: 194  N---DSGHISIVDLSALNTSTIQ---LVVVATDTGNP 224
                DS   ++     L+    Q   + V ATD G P
Sbjct: 1046 TFTVDSTSGTLRTAKQLDFEERQVYGVTVRATDGGRP 1082



 Score = 38.5 bits (88), Expect = 5.5,   Method: Composition-based stats.
 Identities = 52/206 (25%), Positives = 83/206 (40%), Gaps = 33/206 (16%)

Query: 43  LQFSKNEYSVSALENLPVNYVLLTVTTNKPR-------DLRVKYWLSNDYGERFSISRQ- 94
           L F    Y+VS  EN P     +      P        D RV++ + +   ++F  + + 
Sbjct: 83  LSFKNALYNVSIPENSPPRTYTVQPPAADPMGVYLPSPDTRVRFRIKHGDRDKFFKAEER 142

Query: 95  --GDISLMQ---------CLDYETEDSYRFTVYATDTL-----MTTSATVNISVVNVNDW 138
             GD   +           L+ E +D +R  + AT        +    TV + V + ND 
Sbjct: 143 IVGDFCFLSIRTRAGNADVLNRERKDLFRLEIRATAHFPNGRQLEADTTVVVEVTDENDL 202

Query: 139 DPRFRYPQYELFLPHIPLADLTP-GSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIND 195
            P F   QYE       +A+ TP  S I +V A D D G    +  SL    ++      
Sbjct: 203 SPLFYPTQYEAL-----VAEDTPLHSSIARVSAEDADLGINGEIYYSLAEKTDRFAVHPT 257

Query: 196 SGHISIV-DLSALNTSTIQLVVVATD 220
           SG ++I   LS + +S  ++ V+A D
Sbjct: 258 SGVVTITRSLSIMESSRHEVTVLAHD 283


>gi|405962472|gb|EKC28143.1| Cadherin EGF LAG seven-pass G-type receptor 3 [Crassostrea gigas]
          Length = 476

 Score = 88.2 bits (217), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 85/283 (30%), Positives = 143/283 (50%), Gaps = 23/283 (8%)

Query: 9   QPITLVVRAIQYDNQDRYALATL--IVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLT 66
           QP TLV++AIQ DN  R  +A L  I+   G+SL    F++  Y     EN  V   ++T
Sbjct: 39  QP-TLVLKAIQRDNPIRQGVALLQIIIIGQGSSLGP-SFAQPRYHAVVSENEAVGTTVIT 96

Query: 67  VTT---NKPRDLRVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDTLMT 123
           VT    ++   LR    L     E F+++  GDI + + LDYE ++ + F + A+D   +
Sbjct: 97  VTVTDYDQWNSLRYSIGLQ----EHFAVNNNGDILITKELDYEKQNQFVFNLTASDEFYS 152

Query: 124 TSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSL 183
              T+ +SV +VND  P     Q E+ +      +   G+ I  VEA D D    +T S+
Sbjct: 153 ALTTITVSVTDVNDNRPEI--VQREITVN----TERVQGAEITVVEAVDRDPNSSLTFSV 206

Query: 184 RGPYEKMFSINDSGHISIV---DLSALNTSTIQLVVVATDTGNPPRQASVPAIMHFPEAI 240
              ++ +F+++  G +S+    D   L+  ++  V+   D G+P  ++     + FP  +
Sbjct: 207 V-THKSLFAVSQQGVVSLTGSKDDYVLDEYSV--VISVKDNGSPQLESVAIVTVAFPARL 263

Query: 241 VQQASSKLNSGTSSTVLIILGVVLIVLGFVIILLILYIHKNKH 283
            +  SS   + ++  + IILG+V  +L FVII LI+YI + + 
Sbjct: 264 TKNTSSLDMASSNDLIAIILGIVAALLLFVIIFLIVYIIRRRQ 306


>gi|345479135|ref|XP_001602595.2| PREDICTED: cadherin-related tumor suppressor-like [Nasonia
            vitripennis]
          Length = 4967

 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 67/207 (32%), Positives = 103/207 (49%), Gaps = 16/207 (7%)

Query: 44   QFSKNEYSVSALENLPVN-YVLLTVTTNKPRDL--RVKYWLSNDYGERFSI-SRQGDISL 99
            +F++ EY  S  ENLP   +V   + ++K   L  R++Y L  D  ERF + S  G+I  
Sbjct: 2368 EFNRQEYRASVTENLPAGAWVANPLASDKDEGLNARIRYSLLGDKAERFHVNSSTGEIVT 2427

Query: 100  MQCLDYETEDSYRFTVYATDTLMT--TSATVN--ISVVNVNDWDPRFRYPQYELFLPHIP 155
            ++ LD E    Y  T+ A D+  T   +A VN  I+V ++ND  PRF  P+Y  ++P   
Sbjct: 2428 LERLDREQTAVYHLTLVAQDSSPTEPKAAAVNLTITVTDLNDNAPRFASPRYTAYVPD-- 2485

Query: 156  LADLTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSIN-DSGHISIVD-LSALNTST 211
                  G  +   +A D D GD  R+   L G     F+++  SG I  ++ L++   S 
Sbjct: 2486 --STGKGDFVFGAKATDDDDGDNSRIVYRLHGKDSHRFAVDPHSGVIRALEKLASGGRSM 2543

Query: 212  IQLVVVATDTGNPPRQASVPAIMHFPE 238
             QL + A D+G  PR  S   ++H  E
Sbjct: 2544 YQLQIEAFDSGVEPRSVSADLVVHLWE 2570



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 59/195 (30%), Positives = 96/195 (49%), Gaps = 19/195 (9%)

Query: 44  QFSKNEYSVSALENLPVNYVLLT---VTTNKPRDLRVKYWLS----NDYGERFSI-SRQG 95
           +FS+N   V+  EN P N ++ T   V  ++  +  V Y L      DY + F++ +  G
Sbjct: 544 KFSQNIVEVTLSENTPANSLVATLSAVDNDQGTNGSVAYSLHPNVLRDYPKTFALDALTG 603

Query: 96  DISLMQCLDYETEDSYRFTVYATDTL---MTTSATVNISVVNVNDWDPRFRYPQYELFLP 152
            +     LD E+ + YR  V A D      +++ATV +++ +VND  P F    Y   +P
Sbjct: 604 QLMTKITLDRESVEEYRVLVIARDQGTPPQSSTATVLLTLEDVNDNPPVFYPTNYFFTVP 663

Query: 153 HIPLADLTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSIND-SGHISIVD-LSALN 208
                D TPG++IGKV A D D  +  +V  SL    +  FS+++ +G + +   L   +
Sbjct: 664 Q----DATPGTLIGKVFATDADAKENAQVRYSLESGGDGFFSVDERTGDVFLQGALRQAH 719

Query: 209 TSTIQLVVVATDTGN 223
               +L V A DTG+
Sbjct: 720 KILFELTVSAKDTGD 734



 Score = 55.5 bits (132), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 52/168 (30%), Positives = 82/168 (48%), Gaps = 13/168 (7%)

Query: 72   PRDLRVKYWLSNDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDTL---MTTSAT 127
            P + +V+Y+L     + F I +  GDI L++ LD E    Y  T+ A DT    +T S  
Sbjct: 2295 PYNDQVRYFLKEGDTDLFRINASTGDIFLLRPLDRELVSEYVLTLVAMDTGSPPLTGSGI 2354

Query: 128  VNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRG 185
            V + V++VND  P F   +Y   +      +L  G+ +    A+D D+G   R+  SL G
Sbjct: 2355 VRVVVLDVNDHSPEFNRQEYRASVTE----NLPAGAWVANPLASDKDEGLNARIRYSLLG 2410

Query: 186  PYEKMFSINDS-GHISIVD-LSALNTSTIQLVVVATDTG-NPPRQASV 230
               + F +N S G I  ++ L    T+   L +VA D+    P+ A+V
Sbjct: 2411 DKAERFHVNSSTGEIVTLERLDREQTAVYHLTLVAQDSSPTEPKAAAV 2458



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 46/146 (31%), Positives = 72/146 (49%), Gaps = 12/146 (8%)

Query: 92   SRQGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFL 151
            S  G + L + LD E ++SY   V A D L  T  T++I V + ND  P F+   Y   +
Sbjct: 1786 SSTGQLRLAEALDREAKESYVLRVRADDGLQHTDVTLSILVTDTNDNAPSFQATAYSFDV 1845

Query: 152  PHIPLADLTPGSVIGKVEAADGDK---GDRVTLSLRGPYEK-MFSINDSGHISIVDLSAL 207
                L ++  GS +G+V A D D      +++ +L   +   +FS+N S  +  +  S L
Sbjct: 1846 ----LENVPRGSRVGQVVANDADAPGPNSQISYALISDWANDVFSLNPSTGVFTLTAS-L 1900

Query: 208  NTSTIQ---LVVVATDTGNPPRQASV 230
            +   +Q   LVV ATD G P   ++V
Sbjct: 1901 DYEQVQHYILVVQATDGGLPALSSTV 1926



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 57/194 (29%), Positives = 86/194 (44%), Gaps = 17/194 (8%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPR----DLRVKYWLSNDYG-ERFSIS-RQGDIS 98
            F    YS   LEN+P    +  V  N       + ++ Y L +D+  + FS++   G  +
Sbjct: 1836 FQATAYSFDVLENVPRGSRVGQVVANDADAPGPNSQISYALISDWANDVFSLNPSTGVFT 1895

Query: 99   LMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIP 155
            L   LDYE    Y   V ATD     ++++ TV  +VV++ND  P F        L    
Sbjct: 1896 LTASLDYEQVQHYILVVQATDGGLPALSSTVTVYCNVVDLNDNTPIFEAGPRSAEL---- 1951

Query: 156  LADLTPGSVIGKVEAAD---GDKGDRVTLSLRGPYEKMFSINDSGHISIVD-LSALNTST 211
            + + T GSV+    A+D   GD G  V   + G   + F I ++G +     L   N S 
Sbjct: 1952 MENATIGSVVLSASASDLDSGDNGHVVYSIISGDEAEDFGIANNGTLYTRRLLDRENKSV 2011

Query: 212  IQLVVVATDTGNPP 225
              LV+ A D+  PP
Sbjct: 2012 YNLVLEAADSPRPP 2025



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 41/108 (37%), Positives = 58/108 (53%), Gaps = 9/108 (8%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSND-YGERFSISRQ-GDIS 98
            QF +  Y V   E   V   LL V T   ++  +  V Y L N+ +  +F+I    G IS
Sbjct: 1181 QFKRLPYRVQVSEAALVGTQLLRVYTSDADEGLNGDVFYSLENEQHDGQFTIDEATGQIS 1240

Query: 99   LMQCLDYETEDSYRFTVYATD----TLMTTSATVNISVVNVNDWDPRF 142
            L + LD ET D+Y  TV A D    + +++SATV+I V++ ND  PRF
Sbjct: 1241 LARELDRETRDNYHLTVVAHDAGIESRLSSSATVHIEVLDENDNTPRF 1288



 Score = 43.5 bits (101), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 50/169 (29%), Positives = 78/169 (46%), Gaps = 14/169 (8%)

Query: 76   RVKYWLSNDYGERFSISRQ-GDISLMQCLDYETEDSYRFTVYATDT-LMTTSATVNISVV 133
            R+ Y L+ + G++F I+   G I L + +           V A D+ + + SAT  I V+
Sbjct: 899  RISYSLTRNPGQQFRIAENTGIIYLHKPIKSAPGTVLHLEVTAMDSGVQSLSATQQIRVI 958

Query: 134  --NVNDWDPRFRYPQYELFLPHIPLADLTP-GSVIGKVEAADGDKG--DRVTLSLR-GPY 187
              +VND  P F+   YE       L++ TP       + A+D D G   R+  S+  G  
Sbjct: 959  IEDVNDHTPVFKLTSYE-----SSLSESTPVNERFFALLASDIDLGANGRIFYSVTDGNL 1013

Query: 188  EKMFSINDSGHISIVD-LSALNTSTIQLVVVATDTGNPPRQASVPAIMH 235
            E  F I   G + + + L         L V A+D GNP R ++VP ++H
Sbjct: 1014 ENRFGIFPDGQLYVKNVLDREEQDYYALEVTASDQGNPKRSSTVPVVVH 1062



 Score = 42.7 bits (99), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 39/134 (29%), Positives = 60/134 (44%), Gaps = 10/134 (7%)

Query: 95  GDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRF--RYPQYELFLP 152
           G IS   CLD E +  Y   V A   L     T NI+++++ND  PRF     + E+FL 
Sbjct: 816 GSISTAGCLDREEQAYYSLKVSARAGLAYGVTTANITILDINDNPPRFPTEEREEEVFLK 875

Query: 153 HIPLADLTPGSVIGKVEAADGDKG--DRVTLSL-RGPYEKMFSINDSGHISIVD-LSALN 208
                    G  +    A D D G   R++ SL R P ++     ++G I +   + +  
Sbjct: 876 EWAAV----GQEVCLARARDRDAGANARISYSLTRNPGQQFRIAENTGIIYLHKPIKSAP 931

Query: 209 TSTIQLVVVATDTG 222
            + + L V A D+G
Sbjct: 932 GTVLHLEVTAMDSG 945



 Score = 42.7 bits (99), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 50/194 (25%), Positives = 85/194 (43%), Gaps = 25/194 (12%)

Query: 50   YSVSALENLPVNYVLLTVTTNKP---RDLRVKYWLSNDYGERFSISR-QGDISLMQCLDY 105
            +SV+  EN  +   ++ +T++      +  V Y  + +   +F+I    G++++   LD 
Sbjct: 2791 FSVNVTENSEIGAFVIRITSSDQDIGANANVSYSFTGNPSNKFAIDPLSGNVTVAGHLDR 2850

Query: 106  ETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSV- 164
            E +D Y   V   D        + I++ + ND  P F    Y    P +       G + 
Sbjct: 2851 EVQDEYLLKVTVGDGAWGAETPLTITIQDQNDNPPEFEEETYHFHFPEL------QGRMA 2904

Query: 165  -IGKVEAADGDK---GDRVTLSLRGPYEKMFSIN-DSGHI-SIVDLSALNT-------ST 211
             +G+V A D DK      ++ SL  P + +F+++  SG I S   L   +T       + 
Sbjct: 2905 HVGQVVATDRDKQGPNSVISYSLLQPSD-LFTVDPASGDIFSKRTLRYKHTKRPTSPENV 2963

Query: 212  IQLVVVATDTGNPP 225
              L VVATD G PP
Sbjct: 2964 YSLYVVATDNGRPP 2977



 Score = 41.6 bits (96), Expect = 0.63,   Method: Compositional matrix adjust.
 Identities = 47/179 (26%), Positives = 77/179 (43%), Gaps = 12/179 (6%)

Query: 56   ENLPVNYVLLTVTTNKPR-----DLRVKYWLSNDYGERFSIS-RQGDISLMQCLDYETED 109
            E++P   ++ T++   P+     DL V      + GE   I    G++ +    DYET  
Sbjct: 2589 EDVPEGRIITTLSATTPKEGPASDL-VFGMAGGNVGEALRIEPHSGEVVIASGFDYETAP 2647

Query: 110  SYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVE 169
             Y   V   D+   +  +V   +VNV D +         ++   +P  +  P   + K+ 
Sbjct: 2648 HYEAWVEVRDSGEPSLRSVIQLLVNVTDANDNAPVMDSAVYNASVPEEEYPP-LFVTKIS 2706

Query: 170  AADGDKGD--RVTLSLRGPYEKMFSIN-DSGHISI-VDLSALNTSTIQLVVVATDTGNP 224
            A D D G    VT  L   +++ F I+ +SG IS    L     S+ +L+V A D G P
Sbjct: 2707 AKDADSGSNGEVTYHLMNDFDETFVIDEESGEISTNAKLDREEISSYELIVEARDRGTP 2765



 Score = 41.6 bits (96), Expect = 0.71,   Method: Compositional matrix adjust.
 Identities = 38/129 (29%), Positives = 59/129 (45%), Gaps = 10/129 (7%)

Query: 29   ATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTV----TTNKPRDLRVKYWLS-N 83
            ATL+V+  G +     F    Y V   EN PVN  +LTV    + + P  + V+Y +S  
Sbjct: 3091 ATLVVT--GENRHAPTFVAVSYQVRVPENEPVNTTILTVNAVDSDDGPNGM-VRYEISAG 3147

Query: 84   DYGERFSISR-QGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWD-PR 141
            +    FSI    G ++++  LDY+T   YR  + A D    +   +    V   D D P+
Sbjct: 3148 NERHEFSIHPITGAVTILDALDYDTVQEYRLNITARDLGFESKHAIATLTVLAKDIDSPK 3207

Query: 142  FRYPQYELF 150
            +   QY + 
Sbjct: 3208 YAVIQYRIL 3216



 Score = 40.4 bits (93), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 53/240 (22%), Positives = 109/240 (45%), Gaps = 24/240 (10%)

Query: 13  LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVT-TNK 71
           L + A    +  R A A L++     +  E  F ++EYS    E  P+   + +++ T+ 
Sbjct: 408 LTIVATDKGSPPRSATAYLVIHVNDVNDHEPVFQQSEYSAVLSELSPIGSFVASISATDA 467

Query: 72  PRDLRVKYWLSNDYGER---FSISRQ-GDISLMQCLDYETEDSYRFTVYATD---TLMTT 124
              L  + +   + G     F+I +  G ++ +  LD E + S    V A D        
Sbjct: 468 DSGLNARIYYDFESGNEQNWFAIDQDTGLVTTVATLDREIQGSVELKVLARDGGPNPKYV 527

Query: 125 SATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPG-SVIGKVEAADGDKGDRVTLS- 182
           S  + +++++ ND  P+F     E     + L++ TP  S++  + A D D+G   +++ 
Sbjct: 528 STHLRVTILDENDEAPKFSQNIVE-----VTLSENTPANSLVATLSAVDNDQGTNGSVAY 582

Query: 183 ------LRGPYEKMFSIND-SGHI-SIVDLSALNTSTIQLVVVATDTGNPPRQASVPAIM 234
                 LR  Y K F+++  +G + + + L   +    +++V+A D G PP+ ++   ++
Sbjct: 583 SLHPNVLRD-YPKTFALDALTGQLMTKITLDRESVEEYRVLVIARDQGTPPQSSTATVLL 641



 Score = 40.4 bits (93), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 41/136 (30%), Positives = 66/136 (48%), Gaps = 14/136 (10%)

Query: 103 LDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADL 159
           LD E    Y  T+ ATD      + +A + I V +VND +P F+  +Y        L++L
Sbjct: 398 LDREEIPMYNLTIVATDKGSPPRSATAYLVIHVNDVNDHEPVFQQSEYSAV-----LSEL 452

Query: 160 TP-GSVIGKVEAADGDKG--DRVTLSLR-GPYEKMFSIN-DSGHISIV-DLSALNTSTIQ 213
           +P GS +  + A D D G   R+      G  +  F+I+ D+G ++ V  L      +++
Sbjct: 453 SPIGSFVASISATDADSGLNARIYYDFESGNEQNWFAIDQDTGLVTTVATLDREIQGSVE 512

Query: 214 LVVVATDTGNPPRQAS 229
           L V+A D G  P+  S
Sbjct: 513 LKVLARDGGPNPKYVS 528



 Score = 40.0 bits (92), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 34/108 (31%), Positives = 52/108 (48%), Gaps = 9/108 (8%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTT----NKPRDLRVKY-WLSNDYGERFSISRQ-GDI 97
            +F +  Y  S  E   V   ++TV       +P++ +  Y  +  + G+ F +  Q GDI
Sbjct: 3387 EFLQTLYEASVSEGESVGSRIVTVRAIDKDVRPQNNQFSYSIIGGNVGQAFKVDPQSGDI 3446

Query: 98   SLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRF 142
               + LD E+  SY   + A DT     T SATV I +++VND  P F
Sbjct: 3447 ETAKFLDRESVPSYELIIGAIDTGSPPQTGSATVKIELLDVNDNGPVF 3494



 Score = 39.7 bits (91), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 37/142 (26%), Positives = 61/142 (42%), Gaps = 15/142 (10%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKY-WLSNDYGERFSISRQGDISLM 100
            F     S   +EN  +  V+L+ +    +   +  V Y  +S D  E F I+  G +   
Sbjct: 1942 FEAGPRSAELMENATIGSVVLSASASDLDSGDNGHVVYSIISGDEAEDFGIANNGTLYTR 2001

Query: 101  QCLDYETEDSYRFTVYATD------TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHI 154
            + LD E +  Y   + A D      T + ++  V IS+++VND  P F        L + 
Sbjct: 2002 RLLDRENKSVYNLVLEAADSPRPPTTPLASTIQVTISLLDVNDQSPEFVSSNQTSILENA 2061

Query: 155  PLADLTPGSVIGKVEAADGDKG 176
             +      SV+  V+A D D+G
Sbjct: 2062 AI-----NSVVMAVKAVDKDEG 2078


>gi|322791248|gb|EFZ15777.1| hypothetical protein SINV_80198 [Solenopsis invicta]
          Length = 339

 Score = 81.3 bits (199), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 53/184 (28%), Positives = 94/184 (51%), Gaps = 19/184 (10%)

Query: 191 FSINDSGHISIVDLSALNTSTIQLVVVATDTGNPPRQASVPAIMHFPEAIVQQASSKLNS 250
           F I D+G + +  L + N S  + + VATDTG PPR + +P I+H P   +   +++   
Sbjct: 2   FEIKDNGELVLRSLGSFNGSLARFIAVATDTGKPPRSSMIPVIVHIPNGGLLPIAARAAP 61

Query: 251 ---GTSSTVLIILGVVLIVLGFVIILLILYIHKNKHTKNNGPPGSSHS--KNDSFLSNVI 305
              G+S  ++ I G VL +LG VI++LILYI+K+K  K+ G   S  +  +  S + + +
Sbjct: 62  AWLGSSVLLVAIFGAVLGLLGVVILILILYIYKHKRPKSGGSVSSVGTGYREKSPVPSAL 121

Query: 306 LPEKHV-------NVVAIPKIQENPVFNGSQEELQTQR-------GGTNSSIYTATVKKT 351
            P   V       + + +P+ + + +     + + ++        G TN S Y+AT+K  
Sbjct: 122 SPTPQVLGANVLQDALEVPRNRRHDIDGNENDNIDSRNEIDNPVFGETNESSYSATIKSI 181

Query: 352 LSGK 355
            S +
Sbjct: 182 ASAR 185


>gi|260802290|ref|XP_002596025.1| hypothetical protein BRAFLDRAFT_84111 [Branchiostoma floridae]
 gi|229281279|gb|EEN52037.1| hypothetical protein BRAFLDRAFT_84111 [Branchiostoma floridae]
          Length = 3422

 Score = 80.9 bits (198), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 75/245 (30%), Positives = 120/245 (48%), Gaps = 36/245 (14%)

Query: 11   ITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTV--- 67
            ITL V A         A++T+ +S    +    +F  + Y+    EN+  + ++ TV   
Sbjct: 1634 ITLTVTASDGGEVPNSAVSTVTISVTDVNDNAPEFDTSHYNFQVSENMNASTLVGTVFAE 1693

Query: 68   TTNKPRDLRVKYWLSNDYGER--FSISRQ-GDISLMQCLDYETED-SYRFTVYATDTLMT 123
             T++  +  V Y+L +  GE   F+IS++ G+I   + LD E +  S+ FTV+A D  M 
Sbjct: 1694 DTDEGGNGEVSYYL-DPSGEEVPFNISKETGEIITTEVLDREGDAASFTFTVFAQDNGMP 1752

Query: 124  TS----ATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTP-GSVIGKVEAADGDKGD- 177
            TS    ATV +SV + ND  P F    Y     H+ + + +P G V+ +  A D D+G  
Sbjct: 1753 TSLNSTATVTVSVTDENDNPPEFNPSTY-----HVSILEQSPIGMVVAETSATDADEGTN 1807

Query: 178  -RVTLSLRGPYEKMFSINDSGHISIVDL----------------SALNTSTIQLVVVATD 220
              +T SLRG   K F ++D G + + ++                +  N++TI+  VVATD
Sbjct: 1808 AELTYSLRGNGTKYFDVDDKGLVRMREILTVEKLTEEGLISGMVNETNSTTIRFSVVATD 1867

Query: 221  TGNPP 225
             G PP
Sbjct: 1868 AGTPP 1872



 Score = 73.6 bits (179), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 57/186 (30%), Positives = 93/186 (50%), Gaps = 15/186 (8%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVK-------YWLSNDYGERFSISRQGDI 97
           F+ +EY+ +  EN  +  V+  VT    RD            + S+D  ++FSISR G+I
Sbjct: 731 FTADEYNAAVPENARIGVVVTQVTATD-RDSGTNGDIIYSIIFASSDGKDKFSISRDGNI 789

Query: 98  SLMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHI 154
           ++   LD +T +SY   V A D       T+A VNI+V NVND  P+F   QY      +
Sbjct: 790 TVSGSLDADTVESYVVVVMAADQGAASRVTTAIVNINVTNVNDNKPQFDQEQY---TAQV 846

Query: 155 PLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSGHISIVDLSALNTSTIQL 214
             A  T G+V+  ++A DGD+  ++T  +       F+++D+    +  +  +  +T QL
Sbjct: 847 SEAAGT-GTVVATLKATDGDRDAQLTFQIEDGSFGQFNLSDASLYILFLMRFVQNATTQL 905

Query: 215 VVVATD 220
           +V   D
Sbjct: 906 IVTVQD 911



 Score = 72.8 bits (177), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 53/145 (36%), Positives = 74/145 (51%), Gaps = 15/145 (10%)

Query: 93   RQGD----ISLMQCLDYETEDSYRFTVYATDTLM---TTSATVNISVVNVNDWDPRFRYP 145
            +QGD    + +   LD ET+DSY   V ATD  +   T   TV ++V ++ND DP F+ P
Sbjct: 1941 QQGDNMAAVQVKSSLDRETKDSYELLVRATDDKIPQHTAYTTVAVTVTDINDQDPTFQSP 2000

Query: 146  QYELFLPHIPLADLTPGSVIGKVEAADGD--KGDRVTLSLRGPYEKMFSI-NDSGHISIV 202
             Y   +        TPGS +G V A D D  K   +  S+    + +FSI N +G I+ V
Sbjct: 2001 PYHFIVSEAA----TPGSAVGGVIATDMDLGKNGEILYSITADNDNVFSIDNTTGQITTV 2056

Query: 203  -DLSALNTSTIQLVVVATDTGNPPR 226
              L    T+   + V ATD G+PPR
Sbjct: 2057 GQLDREATAEYNITVEATDMGSPPR 2081



 Score = 69.7 bits (169), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 57/176 (32%), Positives = 91/176 (51%), Gaps = 17/176 (9%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRD-------LRVKYWLSNDYGERFSISRQGDI 97
           F+ +EY+ +  EN   N V++T  T   RD       L    + S+D  ++FSIS  G+I
Sbjct: 409 FTADEYNAAVPENAK-NGVVVTQVTATDRDSGTNGDILYSIIFASSDGKDKFSISTDGNI 467

Query: 98  SLMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHI 154
           ++   LD +T +SY   V A D       T+A VNI+V NVND  P+F   QY      +
Sbjct: 468 TVSGSLDADTVESYVVVVMAADQGAASRVTTAIVNINVTNVNDNKPQFGQEQY---TAQV 524

Query: 155 PLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDS--GHISIVDLSALN 208
             A  T G+V+  ++A DGD+  ++T  +       F+++D+  G + +V  S L+
Sbjct: 525 SEAAGT-GTVVATLKATDGDRDAQLTFQIEDGSFGQFNLSDARDGEVQVVISSELD 579



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 62/227 (27%), Positives = 105/227 (46%), Gaps = 15/227 (6%)

Query: 13   LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTV-TTNK 71
            L V+A       R  +A + +S  G +    Q  +  + V+ +EN P    LL V  T++
Sbjct: 1428 LSVKAQDGGESPRSDVADVTISVIGVNESPPQCKEQPFQVTLMENQPSPVQLLQVEVTHE 1487

Query: 72   PRDLRVKYWLSN--DYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDTLMTTSATV 128
                 ++Y L    +    FS+ S  G ++  Q LD E    Y   +  +D        V
Sbjct: 1488 DAAEVLEYRLVQGPNSTSPFSVDSTTGLLNTTQSLDREETSQYSLNISVSDGENVEFCQV 1547

Query: 129  NISVVNVNDWDPRFRYPQYELFLPHIPLAD-LTPGSVIGKVEAADGDKG--DRVTLSLRG 185
             +++++ ND  P+F +P     + H  + + +  G+V+G+V A D D+G   RVT  L  
Sbjct: 1548 QVTILDQNDNTPQF-FPSN---VSHFNVEESVAVGTVVGQVFANDTDEGANGRVTFYLSS 1603

Query: 186  PYEKMFSIN-DSGHISI---VDLSALNTSTIQLVVVATDTGNPPRQA 228
              +  F+++ +SG IS+   +D  +L    I L V A+D G  P  A
Sbjct: 1604 GADGKFTVDRESGIISVLANLDYESLQDPNITLTVTASDGGEVPNSA 1650



 Score = 48.9 bits (115), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 65/222 (29%), Positives = 98/222 (44%), Gaps = 41/222 (18%)

Query: 45   FSKNEYSVSALENL--PVNYVLLTVTTNKPRDLRVKYWLSNDYGERFSISRQ-GDISLMQ 101
            F++  Y V+  EN+  P    L T  T+   +    Y ++      FSI +  G +SL+ 
Sbjct: 1022 FTQQSYMVTVDENMTEPDLITLQTTDTDSDPNNNTNYIITEGDTSVFSIDQTTGRLSLVT 1081

Query: 102  CLD--------------YETE------DSYRFTV------YATDTLMTTSATVNISVVNV 135
             LD              Y TE      D+   TV       ATD +  ++A V+I+V +V
Sbjct: 1082 PLDRDGGPANFSLTVMAYNTELYDGSGDNDTATVVVSVQVLATDGIHNSTAVVDITVTDV 1141

Query: 136  NDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFS 192
            ND  P F    YE+ +        T G+V+  V A D D GD   ++   + G  +  F+
Sbjct: 1142 NDNAPEFTKDVYEVEVNETA----TNGTVVAMVMATDIDSGDNGNITYTIISGNEQNTFA 1197

Query: 193  IN-DSGHISI---VDLSALNTSTIQLVVVATDTGNPPRQASV 230
            I+  SG I++   +D    N S  QLVV A D G P R ++ 
Sbjct: 1198 IDGGSGEITLETTLDHDQGNRS-YQLVVEAKDAGTPIRSSTA 1238



 Score = 44.3 bits (103), Expect = 0.092,   Method: Compositional matrix adjust.
 Identities = 57/224 (25%), Positives = 96/224 (42%), Gaps = 26/224 (11%)

Query: 6    DFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLL 65
            D ++   +VV A       R   A + ++    +  + QF + +Y+    E      V+ 
Sbjct: 798  DTVESYVVVVMAADQGAASRVTTAIVNINVTNVNDNKPQFDQEQYTAQVSEAAGTGTVVA 857

Query: 66   TV-TTNKPRDLRVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDTLMTT 124
            T+  T+  RD ++ + + +    +F++S   D SL            RF   AT  L+  
Sbjct: 858  TLKATDGDRDAQLTFQIEDGSFGQFNLS---DASLYILF------LMRFVQNATTQLI-- 906

Query: 125  SATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDR--VTLS 182
                 ++V +VND  P      Y   +P    A      V+G + A+D D G    +  S
Sbjct: 907  -----VTVQDVNDNFPVLNQTGYTFTIPEEESASY----VVGTISASDNDTGSNGDILYS 957

Query: 183  LRGPYEKMFSINDS-GHISIVDLSALNTST-IQLVVVATDTGNP 224
            ++ P    FS++ S G I+ +      TST +Q VVVA+D G P
Sbjct: 958  IK-PSSSDFSVDQSTGQITTLQQLDRETSTQVQFVVVASDQGRP 1000



 Score = 43.9 bits (102), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 54/229 (23%), Positives = 100/229 (43%), Gaps = 53/229 (23%)

Query: 8   LQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTV 67
           +  +TL ++A+Q +N  R A A + +     +  + Q S ++Y  + +EN P    +LTV
Sbjct: 310 VHDVTLTIKAVQSNNSIRSAEARVYIVVQDANDNQPQMSASQYQATVVENAPRETPVLTV 369

Query: 68  TTNKPRDLRVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDTLMTTSAT 127
           T             ++D  E +++            +  T + YR          + ++T
Sbjct: 370 T-------------ASDKDEVYAV------------ETNTTEQYR----------SPTST 394

Query: 128 VNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDR-------VT 180
           V I++++ ND  P F   +Y   +P     +   G V+ +V A D D G         + 
Sbjct: 395 VLITLLDENDNSPTFTADEYNAAVPE----NAKNGVVVTQVTATDRDSGTNGDILYSIIF 450

Query: 181 LSLRGPYEKMFSINDSGHISIVDLSALNTSTIQ---LVVVATDTGNPPR 226
            S  G  +  FSI+  G+I++    +L+  T++   +VV+A D G   R
Sbjct: 451 ASSDG--KDKFSISTDGNITVS--GSLDADTVESYVVVVMAADQGAASR 495



 Score = 41.6 bits (96), Expect = 0.62,   Method: Compositional matrix adjust.
 Identities = 37/164 (22%), Positives = 71/164 (43%), Gaps = 5/164 (3%)

Query: 6   DFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLL 65
           D ++   +VV A       R   A + ++    +  + QF + +Y+    E      V+ 
Sbjct: 476 DTVESYVVVVMAADQGAASRVTTAIVNINVTNVNDNKPQFGQEQYTAQVSEAAGTGTVVA 535

Query: 66  TV-TTNKPRDLRVKYWLSNDYGERFSIS--RQGDISLM--QCLDYETEDSYRFTVYATDT 120
           T+  T+  RD ++ + + +    +F++S  R G++ ++    LD E  DSY  TV  +D 
Sbjct: 536 TLKATDGDRDAQLTFQIEDGSFGQFNLSDARDGEVQVVISSELDREMTDSYNITVKVSDG 595

Query: 121 LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSV 164
               +  + ++V +VND  P      Y    P    A    G++
Sbjct: 596 TFDATTQLIVTVQDVNDNFPVMNQTGYTFTFPEEESASYVVGTI 639



 Score = 40.8 bits (94), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 36/117 (30%), Positives = 60/117 (51%), Gaps = 10/117 (8%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWL-SNDYGERFSI-SRQGDISL 99
            F +  Y+ +  E+ P   ++L VT    ++  +  + Y + S +  E F I SR G+I L
Sbjct: 1353 FDRETYTTNVTEDKPGGGLILQVTATDEDEGSNSNITYSIRSGNSDEVFYIDSRTGEIFL 1412

Query: 100  M--QCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFL 151
               + LDYET   YR +V A D   +  +  A V ISV+ VN+  P+ +   +++ L
Sbjct: 1413 QTNKSLDYETTPEYRLSVKAQDGGESPRSDVADVTISVIGVNESPPQCKEQPFQVTL 1469



 Score = 38.9 bits (89), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 49/177 (27%), Positives = 84/177 (47%), Gaps = 15/177 (8%)

Query: 44   QFSKNEYSVSALE---NLPVNYVLLTVTTNKPRDLRVKYWL-SNDYGERFSI-SRQGDIS 98
            +F+K+ Y V   E   N  V  +++    +   +  + Y + S +    F+I    G+I+
Sbjct: 1147 EFTKDVYEVEVNETATNGTVVAMVMATDIDSGDNGNITYTIISGNEQNTFAIDGGSGEIT 1206

Query: 99   LMQCLDYETED-SYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHI 154
            L   LD++  + SY+  V A D    + +++ATV+I VVN ND  P F+   Y   +   
Sbjct: 1207 LETTLDHDQGNRSYQLVVEAKDAGTPIRSSTATVDILVVNENDNTPVFQNTTYNFEV--- 1263

Query: 155  PLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSGHISIVDLSALNTST 211
               +    S +G V A D D GD ++ ++    +  FSI DS    I+  + L+  T
Sbjct: 1264 -YENERRSSFVGMVRATDLD-GDSLSYTIGDSVKGYFSI-DSATGEIITSALLDRET 1317



 Score = 37.7 bits (86), Expect = 9.3,   Method: Compositional matrix adjust.
 Identities = 52/222 (23%), Positives = 95/222 (42%), Gaps = 53/222 (23%)

Query: 15  VRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRD 74
           + A+Q +N  R A A + +     +  + Q S ++Y  + +EN P    +LTVT      
Sbjct: 639 ISAVQSNNSIRSAEARVYIVVQDANDNQPQMSASQYQATVVENAPRETPVLTVT------ 692

Query: 75  LRVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVN 134
                  ++D  E +++            +  T + YR          + ++TV I++++
Sbjct: 693 -------ASDKDEVYAV------------ETNTTEQYR----------SPTSTVLITLLD 723

Query: 135 VNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDR-------VTLSLRGPY 187
            ND  P F   +Y   +P     +   G V+ +V A D D G         +  S  G  
Sbjct: 724 ENDNSPTFTADEYNAAVPE----NARIGVVVTQVTATDRDSGTNGDIIYSIIFASSDG-- 777

Query: 188 EKMFSINDSGHISIVDLSALNTSTIQ---LVVVATDTGNPPR 226
           +  FSI+  G+I++    +L+  T++   +VV+A D G   R
Sbjct: 778 KDKFSISRDGNITVS--GSLDADTVESYVVVVMAADQGAASR 817


>gi|307194561|gb|EFN76853.1| Cadherin-related tumor suppressor [Harpegnathos saltator]
          Length = 3259

 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 64/206 (31%), Positives = 98/206 (47%), Gaps = 20/206 (9%)

Query: 44  QFSKNEYSVSALENLPVN-YVLLTVTTNKPRDL--RVKYWLSNDYGERFSISRQ-GDISL 99
           +F++  Y  + LEN+P   +V     T+K   L  +++Y L  D  ERF +    GD+S 
Sbjct: 625 EFARQNYKATMLENMPAGTWVTKLHATDKDEGLNAKIRYSLFGDKVERFYVDPDTGDVST 684

Query: 100 MQCLDYETEDSYRFTVYATDTLMTTSAT---VNISVVNVNDWDPRFRYPQYELFLP---H 153
           M  LD E    Y  T+ A D+  T  AT   + I V +VND  P F  P+Y  +LP   H
Sbjct: 685 MMPLDREQTAVYHLTLLAQDSSPTERATAVKLTIYVQDVNDNAPHFSSPRYTAYLPTGTH 744

Query: 154 IPLADLTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSIN-DSGHISIVDLSALNTS 210
           +       GS +   +A D D G+  R+   L G   K F+I+ D+G I   +       
Sbjct: 745 L-------GSFVFGAKAVDDDDGENSRIVYRLLGQDAKRFTIDFDNGVIRAAEEMIDEQI 797

Query: 211 TIQLVVVATDTGNPPRQASVPAIMHF 236
           T  L + A+D G+ P+  +   ++H 
Sbjct: 798 TYHLQIQASDCGDKPQHVTADLVIHL 823



 Score = 58.5 bits (140), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 56/199 (28%), Positives = 96/199 (48%), Gaps = 17/199 (8%)

Query: 45  FSKNEYSVSALENL--PVNYVLLTVTTNK---PRDLRVKYWLSNDYGERFSI-SRQGDIS 98
           F  + Y    +EN+  P  +V+     +    P + +V+Y+L     + F I +  GDI 
Sbjct: 520 FLDSPYIAHVMENMVPPGGFVIQVKAYDADTPPYNDQVRYFLKEGDTDLFRINASTGDIF 579

Query: 99  LMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIP 155
           L++ LD E    Y  T+ A DT    +T S  V I V++VND  P F    Y+  +    
Sbjct: 580 LLRPLDREVMSEYTLTLVAMDTGSPPLTGSGIVKIIVLDVNDHSPEFARQNYKATM---- 635

Query: 156 LADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIN-DSGHIS-IVDLSALNTST 211
           L ++  G+ + K+ A D D+G   ++  SL G   + F ++ D+G +S ++ L    T+ 
Sbjct: 636 LENMPAGTWVTKLHATDKDEGLNAKIRYSLFGDKVERFYVDPDTGDVSTMMPLDREQTAV 695

Query: 212 IQLVVVATDTGNPPRQASV 230
             L ++A D+    R  +V
Sbjct: 696 YHLTLLAQDSSPTERATAV 714



 Score = 54.3 bits (129), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 41/131 (31%), Positives = 63/131 (48%), Gaps = 10/131 (7%)

Query: 30   TLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTT----NKPRDL-RVKYWLSND 84
            TL++S  G +     F+   Y V   EN PVN  +LTV+     + P  + R K    N+
Sbjct: 1347 TLVIS--GENRHAPTFAAVSYQVRVPENEPVNTTILTVSAVDGDSGPNGMVRYKISAGNE 1404

Query: 85   YGERFSISRQGDISLMQCLDYETEDSYRFTVYATDTLMTTS---ATVNISVVNVNDWDPR 141
              E F  S  G +++++ LDY+    YR  + ATD         AT+ ++V ++ND  P 
Sbjct: 1405 RNEFFVHSITGAVTILEPLDYDMVQEYRLNITATDLGFEPRQAVATLTVNVSDINDNPPT 1464

Query: 142  FRYPQYELFLP 152
            F    Y  +LP
Sbjct: 1465 FNQSVYHAYLP 1475



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 46/144 (31%), Positives = 72/144 (50%), Gaps = 14/144 (9%)

Query: 95  GDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHI 154
           G +SL + LD ET++ Y   V A D L      + I V + ND  P F+   Y   +P  
Sbjct: 49  GRLSLAEALDRETKEKYLLRVRADDGLQHRDIVLTIQVTDTNDNAPTFQSTAYSFDVPE- 107

Query: 155 PLADLTPGSVIGKVEAADGD-KGDRVTLS---LRGPYEKMFSIN-DSGHISIVDLSALNT 209
              D+  GS +G++ A D D +G    LS   +      +FS+N ++G  ++   ++L+ 
Sbjct: 108 ---DVLRGSRVGQIVATDADAEGPNSQLSYVLISDWANDVFSLNPNTGVFTLT--ASLDY 162

Query: 210 STIQ---LVVVATDTGNPPRQASV 230
             +Q   LVV ATD G PP  ++V
Sbjct: 163 EQMQHYILVVQATDGGMPPLSSTV 186



 Score = 48.5 bits (114), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 50/193 (25%), Positives = 90/193 (46%), Gaps = 23/193 (11%)

Query: 50   YSVSALENLPVNYVLLTVTTNK---PRDLRVKYWLSNDYGERFSI-SRQGDISLMQCLDY 105
            +SV+  EN  +   ++ +T++     ++  V Y  + + G +FSI +  G++++   LD 
Sbjct: 1046 FSVNVTENSEIGTFVIRITSSDLDIGQNANVSYSFTYNPGRKFSIDALSGNVTVAGHLDR 1105

Query: 106  ETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPG-SV 164
            E +D Y   + A D        + I++ + ND  P F    Y    P     +L P  + 
Sbjct: 1106 EEQDEYLLKIVAVDGAWRAETALTITIQDQNDNFPEFDETTYRFHFP-----ELQPAMAH 1160

Query: 165  IGKVEAADGDK---GDRVTLSLRGPYEKMFSINDS-GHI-SIVDLSALNT-------STI 212
            +G+V A D DK      ++ SL  P + +F+++ + G + S   L   +T       +  
Sbjct: 1161 VGQVTAIDRDKQGPNSAISYSLLQPSD-LFTVDPATGDVFSKRTLRYKHTHRPSSPENLY 1219

Query: 213  QLVVVATDTGNPP 225
             L +VATD G PP
Sbjct: 1220 SLTIVATDNGKPP 1232



 Score = 47.4 bits (111), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 55/208 (26%), Positives = 92/208 (44%), Gaps = 34/208 (16%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWL--SNDYGERFSISRQGDISL 99
           F     +   +EN  +   +LTVT    +   + RV Y +   +D G+ F ++  G +  
Sbjct: 202 FEAGPLAAEIMENATIGTPVLTVTAQDLDSGDNGRVVYAVVGGDDDGD-FVVASNGTLLT 260

Query: 100 MQCLDYETEDSYRFTVYATDTLMTT----SATVNISVV--NVNDWDPRFRYPQYELFLPH 153
            + L+ E +  Y   + ATD+ +      S+TV ++VV  +VND  P F  P     + +
Sbjct: 261 HRLLNRERKPLYNLVLSATDSPLPPARPLSSTVQVTVVLLDVNDMSPEFISPTKISIIEN 320

Query: 154 IPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSGHISIVDLSAL------ 207
            P       +V+  ++A D D+G       R  Y +    NDS   ++  +  L      
Sbjct: 321 AP-----SNTVVMSIKAVDRDEG-------RNGYVEYSLENDSLPFTLGSVDGLLRVSGP 368

Query: 208 ----NTSTIQLVVVATDTGNPPRQASVP 231
                TS   L V+A D G+PPR +S+P
Sbjct: 369 LDREQTSNYTLQVIAKDRGDPPRSSSIP 396



 Score = 42.7 bits (99), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 44/182 (24%), Positives = 84/182 (46%), Gaps = 15/182 (8%)

Query: 6    DFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVN---Y 62
            D +Q   L + A     + R A+ATL V+ +  +     F+++ Y     EN P++   Y
Sbjct: 1426 DMVQEYRLNITATDLGFEPRQAVATLTVNVSDINDNPPTFNQSVYHAYLPENSPLDSFVY 1485

Query: 63   VLLTVTTNKPRDLRVKYWLSNDYG-ERFSISRQ-GDISLMQCLDYETEDSYRFTVYA--- 117
             ++    + P+   V+Y +    G + F I    G+I+     +YE  + Y   + A   
Sbjct: 1486 KVVARDIDSPKYAVVQYKILGGNGMDHFRIHENTGEITSEISFNYEEANEYDLHIVAANP 1545

Query: 118  -TDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTP-GSVIGKVEAADGDK 175
             ++  M    TV + +  VN++ P+F  P +     H+ +++    G+ +G V+A D D 
Sbjct: 1546 DSNPQMIGFTTVIVHITGVNEFYPKFVQPIF-----HMDVSESAEVGTSVGIVQATDQDS 1600

Query: 176  GD 177
            G+
Sbjct: 1601 GE 1602



 Score = 38.1 bits (87), Expect = 7.0,   Method: Compositional matrix adjust.
 Identities = 50/191 (26%), Positives = 81/191 (42%), Gaps = 33/191 (17%)

Query: 11   ITLVVRAIQYDNQDRYALATLIVSKAGTSLR-----ELQ-------------FSKNEYSV 52
            I  V R +  + Q+R  L   +++K G  LR     E Q             F ++ Y  
Sbjct: 1627 IIRVSRHLDRETQNRVVLT--VMAKNGGGLRGNDTDETQVIVSIQDGNDPPEFLQSYYET 1684

Query: 53   SALENLPVNYVLLTVTTN----KPRDLRVKY-WLSNDYGERFSISRQ-GDISLMQCLDYE 106
            +  E       LLTV       +P++ +  Y  +  + G+ F +  Q GDI   + LD E
Sbjct: 1685 TVSEGADYGTRLLTVRAIDKDIRPQNNQFSYSIIGGNIGQAFKVDPQTGDIETAKQLDRE 1744

Query: 107  TEDSYRFTVYATDTLM---TTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGS 163
            +   Y   + A D  +   T +ATV+I + +VND  P F  P+   ++      +  PG+
Sbjct: 1745 SMSMYDLIIGAIDIGLPPETGTATVHIELTDVNDNGPVFDPPEVIGYVSE----NEPPGT 1800

Query: 164  VIGKVEAADGD 174
             I  + A D D
Sbjct: 1801 SIMTLSATDPD 1811


>gi|348582123|ref|XP_003476826.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 4-like [Cavia
            porcellus]
          Length = 4819

 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 81/270 (30%), Positives = 123/270 (45%), Gaps = 44/270 (16%)

Query: 2    INEDD-----FLQPITLV---VRAIQYDNQDRYALATLIVSKAGTSLRELQ--------- 44
            +NEDD     FL PIT V    R + Y+ Q  Y L T+     G     ++         
Sbjct: 1880 VNEDDEDGIFFLNPITGVFNLTRILDYETQQYYIL-TVRAEDGGGQFTTIRVYFNILDVN 1938

Query: 45   -----FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWL-SNDYGERFSISRQG 95
                 FS N YS S +ENLP+   +L        D    ++ Y + S D   +F+I + G
Sbjct: 1939 DNPPIFSLNSYSTSLMENLPLGSTVLVFNVTDADDGINSQLAYSIASGDSLAQFAIDKNG 1998

Query: 96   DISLMQCLDYETEDSYRFTVYATD------TLMTTSATVNISVVNVNDWDPRFRYPQYEL 149
             + +M+ LD E++  Y   V   D      +  T++A V+I +++VND  P F  P+   
Sbjct: 1999 ILKVMKALDRESQSFYNLVVQVHDLPQLPASRFTSTAQVSIILLDVNDNPPTFLSPK--- 2055

Query: 150  FLPHIPLADLTP-GSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIND-SGHISIV-DL 204
             L +IP  + TP  +V+ K +A+D D G    +  +L  P    FSI    G + +  +L
Sbjct: 2056 -LTYIP--ENTPIDTVVFKAQASDPDSGPNSYIEYTLLNPLGNKFSIGTIDGEVRLTGEL 2112

Query: 205  SALNTSTIQLVVVATDTGNPPRQASVPAIM 234
                 S   L VVATD G PP  +S   ++
Sbjct: 2113 DREEVSNYTLTVVATDKGQPPLSSSTEVVV 2142



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 61/191 (31%), Positives = 92/191 (48%), Gaps = 22/191 (11%)

Query: 50   YSVSALENLPVNYVLLTVTTNKPRDL---RVKYWLSNDYGERFSIS-RQGDISLMQCLDY 105
            +S    EN P+ Y++  VTT+   D+    V  +   D    F+I+   GDI + + L+ 
Sbjct: 2779 FSAHVPENSPLGYIVTRVTTSD-EDIGANAVSRYSLMDTSLPFTINPNTGDIIISRPLNR 2837

Query: 106  ETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVI 165
            E  D YR  V A D+  T S  V I V ++ND  PRF  P Y L  P   LA++  GS +
Sbjct: 2838 EDTDRYRIRVSAHDSGWTVSTDVTIFVTDINDNAPRFSRPSYYLDCPE--LAEI--GSKV 2893

Query: 166  GKVEAADGDKGD--RVTLSLRGPYEKMFSIN-DSGHI---------SIVDLSALNTSTIQ 213
             +V A D D+G   +V   ++   E  F IN  +G I         ++   S +N +   
Sbjct: 2894 TQVYATDPDEGSNGQVFYFIKSQSE-YFRINATTGEIFNKQVLKYQNVSGFSNVNINRHS 2952

Query: 214  LVVVATDTGNP 224
             +V ++D GNP
Sbjct: 2953 FIVTSSDRGNP 2963



 Score = 58.2 bits (139), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 47/157 (29%), Positives = 82/157 (52%), Gaps = 13/157 (8%)

Query: 88   RFSI-SRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFR 143
            +F+I S  G ++L+  LDYE   +Y   + A D+    + ++ T+NI +++ ND  P F 
Sbjct: 1257 QFAIDSTSGQVTLIGKLDYEATPTYSLVIQAVDSGTISLNSTCTLNIDILDENDNTPSF- 1315

Query: 144  YPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTL--SLRGPY-EKMFSIN-DSGHI 199
             P+  LF+    L ++  G ++  V A D D GD   L  S+ G      FSI+ ++G I
Sbjct: 1316 -PKSTLFVD--VLENMRIGELVSSVTATDSDSGDNADLHYSITGTNNHGTFSISPNTGSI 1372

Query: 200  SIVDLSALNTSTI-QLVVVATDTGNPPRQASVPAIMH 235
             +       T ++ +L + A D G PPR +++  ++H
Sbjct: 1373 FLAKKLDFETQSLYKLNITAKDQGRPPRSSTMSVVIH 1409



 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 55/183 (30%), Positives = 89/183 (48%), Gaps = 16/183 (8%)

Query: 56   ENLPVNYVLLTVTTNKPR---DLRVKYWLSNDYGERFSISR-QGDISLMQCLDYETEDSY 111
            EN P++ V+     + P    +  ++Y L N  G +FSI    G++ L   LD E   +Y
Sbjct: 2061 ENTPIDTVVFKAQASDPDSGPNSYIEYTLLNPLGNKFSIGTIDGEVRLTGELDREEVSNY 2120

Query: 112  RFTVYATDTL---MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKV 168
              TV ATD     +++S  V + V+++ND +P F    Y++ +      D   G+ I +V
Sbjct: 2121 TLTVVATDKGQPPLSSSTEVVVMVLDINDNNPVFAQALYKVEINE----DTLTGTDILQV 2176

Query: 169  EAADGDKGDRVTLS---LRGPYEKMFSIND-SGHISIVD-LSALNTSTIQLVVVATDTGN 223
             AADGD+G    +    + G   + F I+  +G I++   L     +T  L V A D G+
Sbjct: 2177 FAADGDEGTNGQVRYGIVDGNTNQEFRIDSVTGAITVAKPLDREKIATYLLTVQAADRGS 2236

Query: 224  PPR 226
             PR
Sbjct: 2237 TPR 2239



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 34/101 (33%), Positives = 49/101 (48%), Gaps = 5/101 (4%)

Query: 77   VKYWLSNDYGERFSIS-RQGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNV 135
            V Y + +   + F I    GD+   + LD E    Y   V A D L ++   +NI+V +V
Sbjct: 1775 VTYTIISGADDSFRIDPESGDLIATKRLDRERRSKYSLLVRADDGLQSSDMRINITVSDV 1834

Query: 136  NDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG 176
            ND  P+F  P Y   +P     D TPGS++  + A D D G
Sbjct: 1835 NDHTPKFSRPVYSFDIPE----DTTPGSLVAAILATDDDSG 1871



 Score = 55.5 bits (132), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 52/193 (26%), Positives = 98/193 (50%), Gaps = 12/193 (6%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRDLR--VKYWLS-NDYGERFSISR-QGDISLM 100
           FS+  YS    EN+ + Y + +V+ +   DL   + Y ++  D    F+I++  G ++  
Sbjct: 793 FSQAAYSFVVFENVALGYHVGSVSASS-MDLNSNISYLITTGDQKGMFAINQVTGQLTTA 851

Query: 101 QCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLT 160
             +D E +  Y+  V A+   +T    VNI+V ++ND  P F      + +    + +  
Sbjct: 852 SVIDREEQSFYQLKVVASGGTVTGDTVVNITVKDLNDNSPHFLQAVESVNV----VENWQ 907

Query: 161 PGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIND-SGHISIVDLSALNTSTIQLVVV 217
            G  I + +A D D+G    V  SL+   + +FSIN+ +G+IS++    ++  + Q+ ++
Sbjct: 908 AGHSIFQAKAVDPDEGVNGMVLYSLKQNPKNLFSINEKNGNISLLGPLDVHAGSYQIEIL 967

Query: 218 ATDTGNPPRQASV 230
           A+D G P   +SV
Sbjct: 968 ASDMGVPQLSSSV 980



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 58/198 (29%), Positives = 88/198 (44%), Gaps = 24/198 (12%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLS-NDYGERFSISRQGDISLM 100
            F +  Y V+  E+ PVN     V     +   +  + Y +S  + G+ F I   G + + 
Sbjct: 996  FDQLSYEVTLSESEPVNSRFFKVQASDKDSGANGEIAYTISEGNTGDAFGIFPDGQLYIK 1055

Query: 101  QCLDYETEDSYRFTVYATDTLMTT-SATVNISVV--NVNDWDPRFRYPQYELFLPHIPLA 157
              LD E +D Y   V A+D  +   SATVN++V+  +VND  P F    Y  +      A
Sbjct: 1056 SELDRELQDRYVLLVVASDRAVEPLSATVNVTVILEDVNDNRPLFNSTNYTFYFEEEQRA 1115

Query: 158  DLTPGSVIGKVEAADGDKGD----RVTLSLRGPYEKMFSINDSGHISIV---DLSAL--- 207
                GS +GKV A D D G     R +  +  P  ++ +I  +G I+     D  +L   
Sbjct: 1116 ----GSFVGKVNAIDKDFGPNGEVRYSFEMVQPDFELHAI--TGEITSTHQFDRESLMRR 1169

Query: 208  -NTSTIQLVVVATDTGNP 224
              T+     V+ATD G P
Sbjct: 1170 RGTAVFTFTVIATDQGLP 1187



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 61/228 (26%), Positives = 102/228 (44%), Gaps = 43/228 (18%)

Query: 45   FSKNEYSVSALENLP-VNYVLLTVTT---NKPRDLRVKY-WLSNDYGERFSISRQGDISL 99
            F  + YSV+  ENL  +   +L V     ++  + ++ Y  L  +  + F++S  G++ +
Sbjct: 2259 FELSPYSVNVPENLETLPRTILQVIARDDDQGSNSKLSYVLLGGNEDQAFTLSASGELRV 2318

Query: 100  MQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
             Q LD ET++ +   + ATD+    +T + T+N+ V +VND  P F    Y   +P    
Sbjct: 2319 TQSLDRETKEHFVLVITATDSGSPALTGTGTINVIVDDVNDNVPTFGSKMYFTTIPE--- 2375

Query: 157  ADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSINDS-GHI---SIVDLSALNT 209
             D   G+ +  V A+D D      +S   + G     F+IN S G I   +++D    + 
Sbjct: 2376 -DAPTGTDVLLVNASDADASTNAVISYSIIGG--NSQFTINPSTGQIITSALLDRETKDN 2432

Query: 210  STIQLVVVATDTG--------------------NPPRQASVPAIMHFP 237
             T  L+VV++D G                    NPPR    P + H P
Sbjct: 2433 YT--LIVVSSDAGSPESLSSSTSVLVTVTDVNDNPPRFQHHPYVTHIP 2478



 Score = 47.4 bits (111), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 40/140 (28%), Positives = 67/140 (47%), Gaps = 13/140 (9%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGERFSIS-RQGDISLM 100
            F  +EY  + LEN P    ++ +     +   +  + Y + +   + F I    G I+  
Sbjct: 3196 FVPDEYFPTVLENAPSGTTVIHLNATDVDSGTNAVIAYSIQSSDSDLFVIDPNTGIITTQ 3255

Query: 101  QCLDYETEDSYRFTVYA---TDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLA 157
              LD+ET+ SY  TV A    D    + ATVNI +   N++ PRF    Y     +  ++
Sbjct: 3256 GFLDFETKQSYHLTVKAFNVPDEERCSFATVNIQLKGTNEYVPRFVSKLY-----YFEIS 3310

Query: 158  DLTP-GSVIGKVEAADGDKG 176
            +  P G+++G+V A+D D G
Sbjct: 3311 EAAPKGTIVGEVFASDRDMG 3330



 Score = 47.0 bits (110), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 72/243 (29%), Positives = 101/243 (41%), Gaps = 34/243 (13%)

Query: 11  ITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNE-YSVSALENLPVNYVLLTVTT 69
           I L + A       + + A L+V+    +  +  FS+ E Y+VS +EN P    LL +  
Sbjct: 548 IVLNISARDQGVHPKVSYAQLVVTLLDVNDEKPVFSQPEGYNVSVVENSPAGTELLVLGA 607

Query: 70  NKPRDLRVKYWLSNDYGERFSISR-------------QGDISLMQCLDYETEDSYRFTVY 116
                      L ++   RFS+                G +S +  LD E +  Y   V 
Sbjct: 608 TDGD-------LGDNGTVRFSLQETESDQRLFRLDPVSGRLSTISSLDREEQAFYSLLVL 660

Query: 117 ATDTLMTTSATV---NISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADG 173
           ATD      ++V   N+S++++ND  P F   QY     HI   +   GS I  V A D 
Sbjct: 661 ATDLGSPPQSSVTHINVSLLDMNDNSPVFYPVQY---FAHIQ-ENEPGGSYITTVSATDP 716

Query: 174 DKG--DRVTLSLRGPYEKMFSIN-DSGHISI-VDLSALNTSTIQLVVVATDTGN--PPRQ 227
           D G    V  S+       F IN  SG IS  + L     +  QL +VATD GN   P Q
Sbjct: 717 DLGLNGTVRYSISAGDRSRFQINAQSGVISTRIALDREEKTAYQLQIVATDGGNLQSPNQ 776

Query: 228 ASV 230
           A V
Sbjct: 777 AIV 779



 Score = 42.4 bits (98), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 48/149 (32%), Positives = 70/149 (46%), Gaps = 12/149 (8%)

Query: 95   GDISLMQCLDYETEDSYRFTVYATDT----LMTTSATVNISVVNVNDWDPRFRYPQYELF 150
            G I     LD ET+D+Y   V ++D      +++S +V ++V +VND  PRF   Q+  +
Sbjct: 2417 GQIITSALLDRETKDNYTLIVVSSDAGSPESLSSSTSVLVTVTDVNDNPPRF---QHHPY 2473

Query: 151  LPHIPLADLTPGSVIGKVEAADGDKGDRVTL--SLRGPYEKMFSINDSGHISIVDLSALN 208
            + HIP   L PGS +  V   D D G    L  SL G   + F I D    +I+    LN
Sbjct: 2474 VTHIPSPTL-PGSFVFAVTVTDADIGPHSELHYSLSGRNSEKFHI-DPMRGAIMAAGPLN 2531

Query: 209  -TSTIQLVVVATDTGNPPRQASVPAIMHF 236
              S +   V   D G+ P+  S    + F
Sbjct: 2532 GASEVTFSVHVKDGGSFPKTDSTTVTVRF 2560



 Score = 40.8 bits (94), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 49/186 (26%), Positives = 84/186 (45%), Gaps = 14/186 (7%)

Query: 6    DFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLL 65
            D  Q   + V A    N    + AT+ ++    +    +FS++  S +  E+  +  ++ 
Sbjct: 3052 DLNQNFLITVTAKDKGNPPLSSQATVQITVTEENYHTPEFSQSHMSATIPESHSIGTIVR 3111

Query: 66   TVTTNKPRDLR----VKYWLSNDYGER-FSI-SRQGDISLMQCLDYETEDSYRFTVYATD 119
            TV+  + RD      V+Y +S    E  F+I S  G + L + LDYE    +  T+ ATD
Sbjct: 3112 TVSA-RDRDAAMNGLVRYSISAGNEEGIFAINSSTGVLVLAKALDYELCQKHEITIRATD 3170

Query: 120  ---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG 176
                  T   +V I+V++VND  P F   +Y    P + L +   G+ +  + A D D G
Sbjct: 3171 GGWVARTGYCSVTINVIDVNDNSPVFVPDEY---FPTV-LENAPSGTTVIHLNATDVDSG 3226

Query: 177  DRVTLS 182
                ++
Sbjct: 3227 TNAVIA 3232



 Score = 38.1 bits (87), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 39/140 (27%), Positives = 69/140 (49%), Gaps = 14/140 (10%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPR--DLRVKYWLSNDYGER-FSISRQ-GDISLM 100
            F ++ +    LENL    +L     +K    + ++ Y + N   E  FSI+   G+I  +
Sbjct: 2671 FKEDPFVSEILENLSPRKILTVSAVDKDSGPNGQLDYEIVNGNKENSFSINHATGEIRSI 2730

Query: 101  QCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLA 157
            + LD E    Y  T+ ++D      +TS  V I++++ ND  PRF     ++F  H+P  
Sbjct: 2731 RPLDREKVSHYMLTIKSSDKGSPSQSTSVKVIINILDENDNAPRFS----QIFSAHVP-- 2784

Query: 158  DLTP-GSVIGKVEAADGDKG 176
            + +P G ++ +V  +D D G
Sbjct: 2785 ENSPLGYIVTRVTTSDEDIG 2804



 Score = 37.7 bits (86), Expect = 8.5,   Method: Compositional matrix adjust.
 Identities = 31/108 (28%), Positives = 54/108 (50%), Gaps = 7/108 (6%)

Query: 89   FSISRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYP 145
            FS++  G +S  + +D E       +V   D+    M+++ TV+I+V++ ND   + R  
Sbjct: 3560 FSLNTAGVLSTTREIDREQISDLYLSVVTRDSGVPQMSSTGTVHITVIDQNDNPSQSR-- 3617

Query: 146  QYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSI 193
              E+F+ +    +L PG ++G V+  D D  D    SL      +FSI
Sbjct: 3618 TVEIFVNY--YGNLFPGGILGSVKPQDPDVLDSFHCSLTSGVTSLFSI 3663



 Score = 37.7 bits (86), Expect = 9.1,   Method: Compositional matrix adjust.
 Identities = 53/192 (27%), Positives = 84/192 (43%), Gaps = 18/192 (9%)

Query: 51   SVSALENLPVNYVLLTVTTNKPRDL---RVKYWLSNDYGERFSIS-RQGDISLMQCLDYE 106
            SV+ +EN    + +       P +     V Y L  +    FSI+ + G+ISL+  LD  
Sbjct: 899  SVNVVENWQAGHSIFQAKAVDPDEGVNGMVLYSLKQNPKNLFSINEKNGNISLLGPLDVH 958

Query: 107  TEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTP-G 162
               SY+  + A+D     +++S  + + V +VND  P F    YE     + L++  P  
Sbjct: 959  A-GSYQIEILASDMGVPQLSSSVILTVYVYDVNDNPPVFDQLSYE-----VTLSESEPVN 1012

Query: 163  SVIGKVEAADGDKGDRVTLSL---RGPYEKMFSINDSGHISI-VDLSALNTSTIQLVVVA 218
            S   KV+A+D D G    ++     G     F I   G + I  +L         L+VVA
Sbjct: 1013 SRFFKVQASDKDSGANGEIAYTISEGNTGDAFGIFPDGQLYIKSELDRELQDRYVLLVVA 1072

Query: 219  TDTGNPPRQASV 230
            +D    P  A+V
Sbjct: 1073 SDRAVEPLSATV 1084


>gi|340374587|ref|XP_003385819.1| PREDICTED: hypothetical protein LOC100641168 [Amphimedon
            queenslandica]
          Length = 7953

 Score = 79.0 bits (193), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 80/230 (34%), Positives = 107/230 (46%), Gaps = 15/230 (6%)

Query: 9    QPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVT 68
            Q  TL V A    +      AT+ VS    +     FS  EYS S LEN+P N  ++TV 
Sbjct: 4980 QSYTLTVLATDAGDIPLTGSATVDVSVLDINDNTPSFSATEYSASVLENIP-NVYIVTVN 5038

Query: 69   TNKP---RDLRVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDT---LM 122
               P    +  + Y LSN           GDI  +  LD ET  S  F VYA D      
Sbjct: 5039 ATDPDNGSNGSITYSLSNTVTLFRIDGVTGDIYAIGSLDRETTSSQVFVVYAADGGNPSR 5098

Query: 123  TTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS 182
            T+SA VN+SV++VND  P F    Y   +P     +   G  I  VEA D D G    ++
Sbjct: 5099 TSSAAVNVSVIDVNDNSPMFIGDPYSGSIP-----ENEAGYNILTVEATDADYGSNSQIT 5153

Query: 183  -LRGPYEKMFSINDS-GHI-SIVDLSALNTSTIQLVVVATDTGNPPRQAS 229
             +   +  +FSI+ S G + S+V L   +    QL VVA D G+PPR ++
Sbjct: 5154 YILQTHTDLFSIDSSTGQLRSLVGLDFESRCFYQLQVVAVDGGSPPRNST 5203



 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 50/145 (34%), Positives = 76/145 (52%), Gaps = 13/145 (8%)

Query: 56   ENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGERFSISRQGD-ISLMQCLDYETEDSY 111
            EN P+N V+LT+ +   + P +  V Y L ND+   F+I+  GD + +   LDYE   SY
Sbjct: 3280 ENTPLNTVILTLVSTDADTPPNSHVTYQLVNDFNGNFNIT--GDKLIVASSLDYEGIQSY 3337

Query: 112  RFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAA 171
               V  T+  +T+ A V ++V++VND  P F  P  E+ +P     D   GS++  + A 
Sbjct: 3338 NLVVMLTNGNLTSYANVTVNVLDVNDNAPIFTSPS-EVSIPE----DAPIGSLVLPLSAT 3392

Query: 172  DG-DKGDR-VTLSLRGPYEKMFSIN 194
            D  D GD  V+  L   Y   FS++
Sbjct: 3393 DADDNGDEPVSFMLADNYTGPFSLD 3417



 Score = 58.5 bits (140), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 64/216 (29%), Positives = 98/216 (45%), Gaps = 18/216 (8%)

Query: 27   ALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYG 86
            + A L VS    S     F K+ Y+ S  E +P+  ++ TV      +    Y L  D  
Sbjct: 3046 SYANLSVSIINVSEFAPMFEKDNYTASINERVPIGTLVETVLAFDDDNSPFTYSLVGDDV 3105

Query: 87   ERFSIS-RQGDISLMQCLDYETEDSYRFTVYATDTL---MTTSATVNISVVNVNDWDPRF 142
            + F+I    G++   + +DYE +  +   V A++     M+  A + I V ++ND  P F
Sbjct: 3106 DYFTIGPNSGEVRTAREIDYEMKPVFSLLVVASEVAMPNMSGYANLLIHVNDINDNRPLF 3165

Query: 143  RYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRV-----TLSLRGP-YEKMFSIND- 195
               +Y+  L    L +L PG+ +G V A+D D G         LS+  P +   F+IN  
Sbjct: 3166 DQDEYQFEL----LENLPPGTSVGTVSASDADSGINADISYSILSVHPPSHYPSFTINST 3221

Query: 196  SGHI-SIVDLSALNTSTIQLVVVATDTGNPPRQASV 230
            SG I S        T     +V ATDTG+  R +SV
Sbjct: 3222 SGEITSTQSFDREETDEYTFMVAATDTGH--RNSSV 3255



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 67/197 (34%), Positives = 91/197 (46%), Gaps = 19/197 (9%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTN--KPRDLRVKYWLSN-DYGERFSISRQ-GDISLM 100
            FS++ Y  S  ENL   YV     T+     +  + Y   N D  + F+I    G I   
Sbjct: 4912 FSQDSYQGSVPENLLDEYVATVSATDLDSTSNGEISYSFENPDTLQYFTIDNTTGVIRTA 4971

Query: 101  QCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYEL-FLPHIPL 156
              L+ E + SY  TV ATD     +T SATV++SV+++ND  P F   +Y    L +I  
Sbjct: 4972 SELNREEQQSYTLTVLATDAGDIPLTGSATVDVSVLDINDNTPSFSATEYSASVLENI-- 5029

Query: 157  ADLTPGSVIGKVEAADGDKGDR--VTLSLRGPYEKMFSIND-SGHI-SIVDLSALNTSTI 212
                P   I  V A D D G    +T SL      +F I+  +G I +I  L    TS+ 
Sbjct: 5030 ----PNVYIVTVNATDPDNGSNGSITYSLSNTV-TLFRIDGVTGDIYAIGSLDRETTSSQ 5084

Query: 213  QLVVVATDTGNPPRQAS 229
              VV A D GNP R +S
Sbjct: 5085 VFVVYAADGGNPSRTSS 5101



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 58/203 (28%), Positives = 95/203 (46%), Gaps = 18/203 (8%)

Query: 44   QFSKNEYSVSALENLPVNY---VLLTVTTNKPRDLRVKYWLSN-DYGERFSIS-RQGDIS 98
            QFS +    S LEN  +     VL     ++  + ++ Y LS  D    F+I+   G+I+
Sbjct: 3468 QFSADPILFSVLENHTLGQSVGVLTATDIDQLSNAKLTYTLSQPDPSLPFAINPLTGEIN 3527

Query: 99   LMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIP 155
            L   LDYE   SY F    TD     + ++A V ++V ++ND  P F    Y + +    
Sbjct: 3528 LTSSLDYELVTSYSFNAIVTDGGEPALFSTALVIVNVSDINDNSPIFTSDVYNVSV---- 3583

Query: 156  LADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKM-FSINDSGHISIVDLSALNTSTIQ- 213
            L  +   SVI ++ A+D D G    ++       + F IN  G   ++  S+L+  ++  
Sbjct: 3584 LESIKTSSVIIQLSASDVDSGSNADITFSLIDSSLPFYIN--GSYVLLGASSLDRESVSE 3641

Query: 214  --LVVVATDTGNPPRQASVPAIM 234
                VVATD G+P R ++   I+
Sbjct: 3642 YTFNVVATDGGHPSRNSTAQVIV 3664



 Score = 44.3 bits (103), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 48/179 (26%), Positives = 84/179 (46%), Gaps = 16/179 (8%)

Query: 76   RVKYWLSNDYGERFSISRQGDISLMQC-LDYETEDSYRFTVYATDT----LMTTSATVNI 130
            ++ Y++S    +RF+I +   + L     D E   +  F V A D+    + ++SA V+I
Sbjct: 6025 QITYYISGKDADRFTIDQSTSVILTAAVFDAEITTALSFNVTAEDSYGSVVQSSSAPVSI 6084

Query: 131  SVVNVNDWDPRFRYPQYELFLPH-IPLAD--LTPGSVIGKV----EAADGDKGDRVTLSL 183
             V+++ND  P F  P Y+L +    P+    LT  +    V     A      D + +S 
Sbjct: 6085 VVIDINDNAPLFDLPFYQLNVSEDTPVGQSLLTVSASDSDVSSINSALTYSLRDIIDMSG 6144

Query: 184  RGPYEKMFSINDSGHISIVDLSALNTSTIQL---VVVATDTGNPPRQASVPAIMHFPEA 239
             G     F+IN S  +  + + AL+    Q+   +V   D+G P RQ++VP  ++  +A
Sbjct: 6145 SGQSLLPFTINSSTGVITLTM-ALDYEKEQMFDFIVTCQDSGTPSRQSNVPVTINVADA 6202



 Score = 42.7 bits (99), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 39/108 (36%), Positives = 56/108 (51%), Gaps = 15/108 (13%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDL------RVKYWLSNDYGERFSI-SRQGDI 97
            FS++ Y  +  E+      +LTV   + RD+      R+ Y ++      F I +  G I
Sbjct: 6209 FSQDMYPATVPEDASFGSTILTV---QARDVDSGSNSRIVYEITGTV--TFIIDATTGVI 6263

Query: 98   SLMQCLDYETEDSYRFTVYATDTLM---TTSATVNISVVNVNDWDPRF 142
            SL+  LDYETE S  F V A D+ +    ++A VNI+V NVND  P F
Sbjct: 6264 SLVGELDYETETSIVFDVLARDSGIQEQVSTAVVNITVTNVNDNPPSF 6311



 Score = 41.2 bits (95), Expect = 0.93,   Method: Compositional matrix adjust.
 Identities = 42/137 (30%), Positives = 70/137 (51%), Gaps = 13/137 (9%)

Query: 95   GDISLMQCLDYETEDSYRFTVYATDTL--MTTSATVNISVVNVNDWDPRFRYPQYELFLP 152
            G+I+    +D E   SY  TV AT+    +T++ATV +S++++ND  P F    Y   +P
Sbjct: 5297 GNITTRTEIDREMNSSYLLTVTATEAASNLTSTATVYVSIIDINDNPPIFLQRSYSREIP 5356

Query: 153  HIPLADLTP-GSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSIND-SGHISI---VDLSA 206
                 + TP G+ I +V A D D  D+  L  +   +  +F+I+  +G I +   VD   
Sbjct: 5357 -----ESTPVGTQILQVMATDADFIDQGNLRYQILNFVPLFNISSRTGAIYLAEAVDFET 5411

Query: 207  LNTSTIQLVVVATDTGN 223
            + ++T    V   D+GN
Sbjct: 5412 IESTTRTFSVEVFDSGN 5428



 Score = 40.8 bits (94), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 53/171 (30%), Positives = 76/171 (44%), Gaps = 16/171 (9%)

Query: 20   YDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTT---NKPRDLR 76
            YD  +R   A  +++    +     F+++ YS S  EN P   +L  V     +   D R
Sbjct: 4683 YDGFNRSNDAVSLITVETLNEHVPNFTQSIYSASIYENQPNGTLLARVMASDGDSGTDGR 4742

Query: 77   VKYWL---SNDYG-ERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATV 128
            + Y +   S   G  RF+I S  G I+ +  LD E  D Y  TV ATD+     T +A V
Sbjct: 4743 ITYSIVSVSPSVGMNRFTIGSDNGRITAVS-LDREDIDMYNITVAATDSGPDPNTATALV 4801

Query: 129  NISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRV 179
             + V+N ND  P F    Y L +P     D    + I  V A D D  D++
Sbjct: 4802 TVEVLNENDNSPYFPQSVYHLSIPE----DTPTYTEIDVVSAIDPDIPDQL 4848



 Score = 40.8 bits (94), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 39/137 (28%), Positives = 67/137 (48%), Gaps = 11/137 (8%)

Query: 92   SRQGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFL 151
            S  G +SL+Q  D E+  +    V  +D L +++  VN+ +++VND  P F    Y   +
Sbjct: 6363 SGDGVLSLLQPFDRESLSNCVLVVSVSDGLHSSNVIVNMRILDVNDNQPSFTQSIYTESI 6422

Query: 152  PHI-PLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSINDSGHISIVD--LS 205
            P I P+      + +  V A D D+G+  T++   + G   + F+I  S  +  V+  L 
Sbjct: 6423 PEIYPV-----NTFVTTVTATDPDEGENGTVTYAIVGGNVGEAFTIMPSNGMIRVNGPLD 6477

Query: 206  ALNTSTIQLVVVATDTG 222
                S+  L +VA+D G
Sbjct: 6478 HETVSSYNLTLVASDGG 6494



 Score = 40.8 bits (94), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 43/145 (29%), Positives = 68/145 (46%), Gaps = 21/145 (14%)

Query: 45   FSKNEYSVSALENL----PVNYVLLTVTTNKPRDLRVKYWLSNDYGERFSI-SRQGDISL 99
            F+  +YS +  EN     PV  ++     ++     + Y +    G  F I S  G IS+
Sbjct: 2728 FTSTDYSFTINENTAIDTPVGLIINATDDDQGSYGMITYSMVTQ-GSLFKIDSTTGSISV 2786

Query: 100  MQCLDYE-TEDSYRFTVYATDTL-----MTTSATVNISVVNVNDWDPRFRYPQY--ELFL 151
               +D+E    +Y FTV A+D L     +TT+ T NI  ++VN++ P F    Y      
Sbjct: 2787 SAAIDFEMVGPTYMFTVSASDGLKNTHVITTNVTANI--MDVNEFPPVFNRLDYSDSAVC 2844

Query: 152  PHIPLADLTPGSVIGKVEAADGDKG 176
             ++PL     G+ +  V+A DGD G
Sbjct: 2845 ENVPL-----GTEVLTVQATDGDAG 2864



 Score = 38.9 bits (89), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 34/102 (33%), Positives = 50/102 (49%), Gaps = 9/102 (8%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPR---DLRVKYWLSN----DYGERFSI-SRQGD 96
            F ++EY    LENLP    + TV+ +      +  + Y + +     +   F+I S  G+
Sbjct: 3165 FDQDEYQFELLENLPPGTSVGTVSASDADSGINADISYSILSVHPPSHYPSFTINSTSGE 3224

Query: 97   ISLMQCLDYETEDSYRFTVYATDT-LMTTSATVNISVVNVND 137
            I+  Q  D E  D Y F V ATDT    +S TV + V +VND
Sbjct: 3225 ITSTQSFDREETDEYTFMVAATDTGHRNSSVTVTVRVNDVND 3266



 Score = 38.5 bits (88), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 1/59 (1%)

Query: 88   RFSISRQGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQ 146
            RFSI   G ++++  LD ET D Y   +  TD L T  A++ + V +++D +P    PQ
Sbjct: 2556 RFSIDSNGRVTVVSVLDRETRDLYVLNISVTDGLFTDYASLTVIVSDIDD-NPTCFSPQ 2613


>gi|350403194|ref|XP_003486727.1| PREDICTED: protein dachsous-like [Bombus impatiens]
          Length = 3229

 Score = 78.6 bits (192), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 76/240 (31%), Positives = 109/240 (45%), Gaps = 27/240 (11%)

Query: 14   VVRAIQYDNQDRYALATLIVSKAGTSLR-----ELQ--------FSKNEYSVSALENLPV 60
            + R + Y+ Q R+ L    +  AG S       E+Q        F +NEY V   E   +
Sbjct: 815  LARRLDYETQQRHGLLIRALDGAGLSANLSLSVEVQDVNDNPPVFERNEYHVEVPEGAKL 874

Query: 61   NYVLLTVTT---NKPRDLRVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYA 117
            +  +L VT    +   + R+ Y L      R S    G I L Q LD ET D +  TV A
Sbjct: 875  DSQILQVTAVDLDTGNNARLSYRLQGSTAFRIS-PNTGWIYLAQILDRETLDRHALTVLA 933

Query: 118  TDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGD 174
            TD      T SA+V ++V++ ND DPRF    Y   L    L +L  G+++G V A+D D
Sbjct: 934  TDNGSPAATASASVLVTVLDDNDNDPRFEKDFYGFDL----LENLPSGTLVGSVSASDSD 989

Query: 175  KGDRVTLSLRG-PYEKMFSIN-DSGHISIVDLSALNTSTI-QLVVVATDTGNPPRQASVP 231
             G    L          F+++ D+G I+  +     T  + +LV+ A D G P R A VP
Sbjct: 990  LGKNALLRYAVVQANSSFTVDPDTGEITTKEPLDRETKGVHELVLEARDQGTPSRAARVP 1049



 Score = 55.1 bits (131), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 55/199 (27%), Positives = 93/199 (46%), Gaps = 15/199 (7%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRDLR---VKYWLSNDYGERFSI-SRQGDISLM 100
           F  +   +S  E+ P++  L       P  +    ++Y L  +  + F I  R G++ L 
Sbjct: 757 FPTSSVRISVPESHPLHSALYVAHATDPDIVPSHPIRYVLGQNSNDLFGIDGRSGELYLA 816

Query: 101 QCLDYETEDSYRFTVYATDTL-MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADL 159
           + LDYET+  +   + A D   ++ + ++++ V +VND  P F   +Y + +P     D 
Sbjct: 817 RRLDYETQQRHGLLIRALDGAGLSANLSLSVEVQDVNDNPPVFERNEYHVEVPEGAKLD- 875

Query: 160 TPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSIN-DSGHI---SIVDLSALNTSTIQLV 215
              S I +V A D D G+   LS R      F I+ ++G I    I+D   L+     L 
Sbjct: 876 ---SQILQVTAVDLDTGNNARLSYRLQGSTAFRISPNTGWIYLAQILDRETLDRHA--LT 930

Query: 216 VVATDTGNPPRQASVPAIM 234
           V+ATD G+P   AS   ++
Sbjct: 931 VLATDNGSPAATASASVLV 949



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 50/170 (29%), Positives = 83/170 (48%), Gaps = 18/170 (10%)

Query: 77   VKYWLSNDYGERFSI---SRQGDISLMQCLDYETEDSYRFTVYATDTL-----MTTSATV 128
            ++Y L  ++  R S    S  G ++L + LD E    Y   + A+D       + ++ T 
Sbjct: 1314 LRYGLVAEFPSRGSFAVDSLTGALTLARPLDREERAEYMLILKASDRAPPGEQLASTVTA 1373

Query: 129  NISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGD--RVTLSLRGP 186
             I V++ ND DP F  P+           DL PG+++ +V A D D GD  RV+  +   
Sbjct: 1374 RIIVLDQNDNDPVFVAPESTKV---AVTPDLLPGAMLVRVVAVDKDAGDNGRVSYVITSA 1430

Query: 187  YEKM-FSIN-DSGHISIVDLSALNTSTIQLVVVATDTGNPPRQASVPAIM 234
             E+  FS+  +SG   IV L      + +L + A D G+PPR++++  I+
Sbjct: 1431 NEEARFSVGYESG---IVSLERPMVRSTELEITANDHGSPPRKSTLRLIL 1477



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 35/103 (33%), Positives = 54/103 (52%), Gaps = 7/103 (6%)

Query: 93   RQGDISLMQCLDYETEDSYRFTVYATDTLMTTSAT-VNISVVNVNDWDPRFRYPQYELFL 151
            + G ++     DYE  + Y FT+ ATDT   T+A  V + + + +++ P+F    Y   +
Sbjct: 2664 KSGTVTTRAVFDYELRNRYAFTLRATDTGGRTAAVRVRVEIESRDEFYPQFTERMYRFGI 2723

Query: 152  PHIPLADLTPGSVIGKVEAADGDKG--DRVTLSL--RGPYEKM 190
             +   A + PG+VIG V A D DKG   RV   L  + PY K+
Sbjct: 2724 KN--GAQVIPGTVIGHVTATDRDKGPDGRVVYQLTSQHPYFKL 2764



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 63/212 (29%), Positives = 93/212 (43%), Gaps = 26/212 (12%)

Query: 32   IVSKAGTSLRELQFSKN-----EYSV-SALENLPVNYVLLTVTTNKPRDLRVKYWLSNDY 85
            +   A  S+R +  + N     E+S+ S  E   V  VL T+T N   D+     LS  +
Sbjct: 2172 LTGTAALSVRVIDINDNQPTFPEHSIISVSEGTAVGTVLTTITAN---DVDSSPALSYRF 2228

Query: 86   GE-----RFSISR-QGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWD 139
            G       FSI R  G + L + LD ET   Y   V A+D +   +  + + V+++ND  
Sbjct: 2229 GNVTSPGPFSIDRYGGKVVLRRRLDAETRSEYSLQVIASDGVHEATTDLIVRVMDLNDNA 2288

Query: 140  PRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGD---KGDRVTLSLRGPYEKMFSINDS 196
            PRF+   Y   LP     DL     I  V A D D      RV   L     K FS++ +
Sbjct: 2289 PRFQQSAYIATLPE-GRGDL---QEILTVNATDDDLTEDNSRVRYYLL-KATKGFSVHPA 2343

Query: 197  GHISIVDLSALNT---STIQLVVVATDTGNPP 225
              +  V+ +A+       ++L +VA D G PP
Sbjct: 2344 TGVLTVNRTAIPRPLPKEVELAIVAEDYGKPP 2375



 Score = 46.6 bits (109), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 51/142 (35%), Positives = 66/142 (46%), Gaps = 15/142 (10%)

Query: 95   GDISLMQCLDYETEDSYRFTVYATDT----LMTTSATVNISVVNVNDWDPRF-RYPQYEL 149
            G I+    LD E + SY F V ATD+      +T+  V I V +VND  P F  YP    
Sbjct: 1786 GVITTAGPLDRERQTSYNFVVVATDSGKYDARSTTIPVEIRVSDVNDNAPVFDEYP---- 1841

Query: 150  FLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEK-MFSINDS-GHI-SIVDL 204
            F   + +    P   I +V A D D G    V  S     EK  F I+ S G + + + L
Sbjct: 1842 FRARVSIG-TQPEKNILRVVATDADDGPNGEVVYSFLHEQEKPKFRIHPSTGAVTAALSL 1900

Query: 205  SALNTSTIQLVVVATDTGNPPR 226
            S  N  T  L V+A D GNPP+
Sbjct: 1901 SQDNGKTYHLEVLARDKGNPPK 1922



 Score = 45.4 bits (106), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 47/135 (34%), Positives = 65/135 (48%), Gaps = 13/135 (9%)

Query: 103 LDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADL 159
           LD E +  Y  +V ATD     +    T  + V +VND  P+F   +YE  L    L   
Sbjct: 302 LDREEKPVYDLSVEATDAGTPPLRAVRTFRLVVTDVNDNAPKFGRERYEAHL----LEAS 357

Query: 160 TPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSIND-SGHISI---VDLSALNTSTIQLV 215
            PG+ + KV A D D+G    +         F I++ SG IS    VD  A + + I LV
Sbjct: 358 EPGTPVLKVTATDLDEGANSAIKYSLLNSTWFVIDETSGLISTRTHVDCEA-DPAPI-LV 415

Query: 216 VVATDTGNPPRQASV 230
           V+ATD+G PP  +S 
Sbjct: 416 VIATDSGRPPLSSSA 430



 Score = 44.3 bits (103), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 53/192 (27%), Positives = 86/192 (44%), Gaps = 19/192 (9%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGERFSISR-QGDISL 99
           +F +  Y    LE       +L VT    ++  +  +KY L N     F I    G IS 
Sbjct: 343 KFGRERYEAHLLEASEPGTPVLKVTATDLDEGANSAIKYSLLN--STWFVIDETSGLIST 400

Query: 100 MQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
              +D E + +    V ATD+    +++SATV ++V ++ND +P F  P Y   +     
Sbjct: 401 RTHVDCEADPAPILVVIATDSGRPPLSSSATVRVTVHDLNDNEPIFEKPLYNATVSE--- 457

Query: 157 ADLTPGSVIGKVEAADGDKGDRVTLSL-----RGPYEKMFSINDSGHISI-VDLSALNTS 210
            D+  GS   KV+A D D G    ++      R   E++   +D+G I +   L      
Sbjct: 458 -DMPVGSCFLKVQATDPDCGVNAMVNYTLAAGRMESEQLMVRSDTGDICVRTPLDRETAP 516

Query: 211 TIQLVVVATDTG 222
            +++ V+ATD G
Sbjct: 517 YLEIPVIATDRG 528



 Score = 43.1 bits (100), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 51/219 (23%), Positives = 104/219 (47%), Gaps = 23/219 (10%)

Query: 27   ALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKP---RDLRVKYWLSN 83
            A A+++V+    +  + +F K+ Y    LENLP   ++ +V+ +     ++  ++Y +  
Sbjct: 943  ASASVLVTVLDDNDNDPRFEKDFYGFDLLENLPSGTLVGSVSASDSDLGKNALLRYAVVQ 1002

Query: 84   DYGERFSISRQ-GDISLMQCLDYETEDSYRFTVYATDTLMTTSAT---VNISVVNVNDWD 139
                 F++    G+I+  + LD ET+  +   + A D    + A    + ++V++VND  
Sbjct: 1003 -ANSSFTVDPDTGEITTKEPLDRETKGVHELVLEARDQGTPSRAARVPLKVTVLDVNDNS 1061

Query: 140  PRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEK------MFSI 193
            P    PQ ++        +  PG+ + +V A D D G+  +++     ++      +F+I
Sbjct: 1062 PEIVDPQGDVVSVR---EEQPPGTEVARVRALDTDLGENASVTYTILKDRDSDGYNVFTI 1118

Query: 194  ND-SGHI---SIVDLSALNTSTIQLVVVATDTGNPPRQA 228
            +  +G I   +++D    N    ++ V ATD G PPR  
Sbjct: 1119 DPITGMIRTKAVLDHEERN--VYRVSVKATDAGRPPRHG 1155



 Score = 41.6 bits (96), Expect = 0.57,   Method: Compositional matrix adjust.
 Identities = 56/193 (29%), Positives = 84/193 (43%), Gaps = 22/193 (11%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPR---DLRVKYWLSNDYGERFSI---SRQGDIS 98
           F K  Y+ +  E++PV    L V    P    +  V Y L+    E   +   S  GDI 
Sbjct: 446 FEKPLYNATVSEDMPVGSCFLKVQATDPDCGVNAMVNYTLAAGRMESEQLMVRSDTGDIC 505

Query: 99  LMQCLDYETEDSYRFTVYATDT-LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLA 157
           +   LD ET       V ATD   ++T A V + V +VND  P F   +Y + L      
Sbjct: 506 VRTPLDRETAPYLEIPVIATDRGGLSTVAIVRVQVTDVNDNRPIFEPRKYNVTLK----- 560

Query: 158 DLTPGSVIG---KVEAADGDKGDRVTLSLR---GPYEKMFSIN-DSGHISIVDLSALNTS 210
             + G + G   ++ A D D G    ++ R   G    +F I+ ++G + +   S L+ S
Sbjct: 561 --SDGPIQGPILRLVATDLDVGLFGQVAYRITNGNEAGVFHIDRNTGELQVARPSLLSRS 618

Query: 211 TI-QLVVVATDTG 222
            + QL V ATD  
Sbjct: 619 PLHQLNVTATDAA 631



 Score = 41.2 bits (95), Expect = 0.81,   Method: Compositional matrix adjust.
 Identities = 47/168 (27%), Positives = 74/168 (44%), Gaps = 22/168 (13%)

Query: 81  LSNDYGERFSIS----RQG----DISLMQCLDYETEDSYRFTVYATDT---LMTTSATVN 129
           +S +Y + F +S    R G    D+     LD E    Y   + A D     + +   VN
Sbjct: 54  VSGNYADAFRLSQHRGRDGVLYLDLQNSGSLDREARSRYHLVIEALDGGAPPLRSRLHVN 113

Query: 130 ISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGD--RVTLSL---R 184
           ++V +VND  P F   +Y   +      + T G+ +  V A D D GD  R+  S+   +
Sbjct: 114 VTVQDVNDNPPIFNQTRYVASIAE----NATVGTPVLAVNATDSDAGDNGRIEYSINRRQ 169

Query: 185 GPYEKMFSINDSGHISIVD--LSALNTSTIQLVVVATDTGNPPRQASV 230
              E+MF I+    +  V+  L   +    +LV+VA D G  P +AS 
Sbjct: 170 SDREEMFRIDPETGMVYVNKALDFESKERHELVIVARDRGAQPLEASA 217



 Score = 40.8 bits (94), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 47/156 (30%), Positives = 72/156 (46%), Gaps = 18/156 (11%)

Query: 49   EYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGERFSISRQGDISLMQCLDYETE 108
            EY V+A EN      L+ ++     DL     ++ D    F ISR G + L + LD ET+
Sbjct: 2397 EYKVTAKENTLKGTTLMRLSD---VDLLDGAIVAGDDSGTFEISR-GKLILSRTLDRETK 2452

Query: 109  DSYRFTVYATDTLMTTSA-------TVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTP 161
            D Y   + + +  MTT +       TV I+V +VND  PRF    +++ +      +   
Sbjct: 2453 DKYVLRLGSKNENMTTGSLVGDEPVTVIITVEDVNDNYPRFLEDLHQVSIKE----NAVR 2508

Query: 162  GSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSG 197
            G+ +  + A D D    V  +L   YE + S ND G
Sbjct: 2509 GTTVAMLRAKDDDLAGSVAANL--AYE-ITSGNDGG 2541


>gi|260785516|ref|XP_002587807.1| hypothetical protein BRAFLDRAFT_92256 [Branchiostoma floridae]
 gi|229272960|gb|EEN43818.1| hypothetical protein BRAFLDRAFT_92256 [Branchiostoma floridae]
          Length = 4039

 Score = 78.6 bits (192), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 67/248 (27%), Positives = 118/248 (47%), Gaps = 26/248 (10%)

Query: 12   TLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNK 71
            +LVV A+   +      AT++++    +   +QF +N YS S LE+ P+   ++ V+T  
Sbjct: 2698 SLVVEAVDKGSPTLTGTATVLITVEDKNDNPMQF-RNLYSTSILEDTPIGSFVIQVSTTD 2756

Query: 72   PRDL------RVKYWLSNDYGE---RFSISRQ-GDISLMQCLDYETEDSYRFTVYATDTL 121
            P D+      + K+ L + Y E   +F++ R  G++++   LD E  D Y   V A D+ 
Sbjct: 2757 P-DIGSNAMAQYKFSLDSQYAEARGKFNMGRDSGNVTVASTLDREISDHYELLVIAEDSA 2815

Query: 122  MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTL 181
               +  ++I++++VND  PRF  P +E  LP      +    ++ ++ A D D+G    +
Sbjct: 2816 WEANTPLSITILDVNDNPPRFSAPVFERNLPE----GIRANQLVTRLVATDEDEGTNAEV 2871

Query: 182  SLRGPYEKMFSINDSGHISIVDLSAL----------NTSTIQLVVVATDTGNPPRQASVP 231
              R      F   D    +I+  ++L          N +  Q VV+ATD G PP    V 
Sbjct: 2872 FYRMKTLSNFFRLDESSGAILTKNSLEFVPDWTGTTNPNHHQFVVIATDRGTPPLSGEVT 2931

Query: 232  AIMHFPEA 239
             I++  +A
Sbjct: 2932 VIINIIDA 2939



 Score = 57.8 bits (138), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 62/202 (30%), Positives = 95/202 (47%), Gaps = 22/202 (10%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGE---RFSIS-RQGDI 97
           F ++EY VS  E+ P+   +LTV     ++  +  + Y L  D GE   +F I  R G +
Sbjct: 268 FDQSEYIVSLNESAPIGTSVLTVRATDIDEGTNAEITYLL--DSGEPATKFQIDPRTGVV 325

Query: 98  SLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDP--RFRYPQYELFLP 152
           + +Q LDYE  D+Y   V A D    +    A + I++V+ ND DP   FRY        
Sbjct: 326 TTLQELDYEESDNYYVNVQAHDNGSPIQYGRAYITINLVDENDHDPVIGFRYFPIGAQFA 385

Query: 153 HIPLADLTPGSVIGKVEAADGDKGDRVTLSLR---GPYEKMFSINDSGHISIVDLS-ALN 208
            +   D    +V+  V   D D+G    + L    G  +  F +     +SIV ++ +L+
Sbjct: 386 SVE-EDAALNTVVTLVTITDADQGPNGDVDLEILSGNEQGTFQVTHVPGLSIVKVARSLD 444

Query: 209 ---TSTIQLVVVATDTGNPPRQ 227
              T    L + ATD GNPPR+
Sbjct: 445 REITDQYNLTMRATDHGNPPRR 466



 Score = 55.1 bits (131), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 61/199 (30%), Positives = 89/199 (44%), Gaps = 20/199 (10%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVT-TNKPRDLR--VKYWLS-NDYGERFSISRQGDISLM 100
            FS + YS +  E+ PVN    +VT T++   L   + Y ++  + G+RF +   G++ + 
Sbjct: 1007 FSSSSYSTAIPESQPVNDQFFSVTATDEDAGLNGLISYSITGGNPGDRFGVFPDGNLYVR 1066

Query: 101  QCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLA 157
              LD E +  Y   V A D      +  A V + +++ ND  P F    Y LFL     A
Sbjct: 1067 NALDREVQSRYVLIVEAQDNGVEAKSAVANVTVEILDENDNRPLFANSTYNLFLDEEAPA 1126

Query: 158  DLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKM-FSINDS-GHIS---IVDLSAL----N 208
                 +++  V A D D G    L      E+  F+IN S G IS   + D   L     
Sbjct: 1127 Q----TMVALVTAVDRDAGTNAELRYSFITEQSDFAINPSTGAISSLRMFDREELIQRTG 1182

Query: 209  TSTIQLVVVATDTGNPPRQ 227
             ST  L V  TD G+PP Q
Sbjct: 1183 LSTFTLEVAVTDGGDPPLQ 1201



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 63/227 (27%), Positives = 108/227 (47%), Gaps = 29/227 (12%)

Query: 23   QDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNK---PRDLRVKY 79
            QDR   ATL ++    +    +F+++ Y VS  EN   +  ++ V+ +      +  V+Y
Sbjct: 1201 QDR---ATLQITVRDINDNVPRFAQDTYQVSISENAQRSQQVVRVSASDMDYGNNALVRY 1257

Query: 80   WLS--NDYGERFSISRQGDISLMQCLDYETEDSYRFTV----YATDTLMTTSATVNISVV 133
             ++  ND G+    S  G I L Q LD E ED Y   V     A++  +++   VNISV+
Sbjct: 1258 TITEGNDEGKFLIDSSSGQIMLAQLLDREVEDFYSLLVDVRDSASENPLSSQCRVNISVL 1317

Query: 134  NVNDWDPRFRYPQYELFLPHIPLADLTPGS----VIGKVEAADGDKGD--RVTLSL-RGP 186
            + ND +P        +F P +  AD+   +    +I  + A DGD G    +T S+  G 
Sbjct: 1318 DENDNEP--------VFSPTLQTADVLESTRVNDLITTLTATDGDAGSNGEITYSISEGN 1369

Query: 187  YEKMFSIND-SGHISIVD-LSALNTSTIQLVVVATDTGNPPRQASVP 231
                F+++  +G + +   L   +T+  +L + A+D G PP    +P
Sbjct: 1370 AHGTFTLDSYTGKLYLAKALDYESTNVYRLNITASDHGTPPLSTVIP 1416



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 63/235 (26%), Positives = 105/235 (44%), Gaps = 21/235 (8%)

Query: 13  LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPV-NYVLLTVTTNK 71
           L +RA  + N  R  +A LI+     +  E  F +  Y+ +  E +P+ +YV     T+ 
Sbjct: 453 LTMRATDHGNPPRRTIANLIIYVNDINDHEPVFERTRYNTTLSERVPIGSYVQGVTATDD 512

Query: 72  PRDL--RVKYWL--SNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATD---TLMTT 124
              L  +V+Y +   N+YG        G ++    LD+E        + A+D   ++  T
Sbjct: 513 DSGLNAQVRYAIVSGNEYGWFMIDGNTGLVTTQADLDHEVASGVVLNISASDQGISIQFT 572

Query: 125 SAT-VNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGD------ 177
           S T + I++++ ND+ P F    Y + +     A   P  VI  V A D D+G       
Sbjct: 573 SYTQLTITIIDENDFVPTFSESPYNVTVLENQSA---PREVI-TVTAQDDDQGSNGEVYY 628

Query: 178 RVTLSLRGPYEKMFSIN-DSGHI-SIVDLSALNTSTIQLVVVATDTGNPPRQASV 230
                    Y   F ++ ++G I ++V      T    LVV A+D GNPP+Q++V
Sbjct: 629 EFDTETANRYSGSFRLDSNTGRIDTLVTFDRETTDLYSLVVRASDRGNPPQQSAV 683



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 53/190 (27%), Positives = 91/190 (47%), Gaps = 17/190 (8%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGERFSIS-RQGDISLM 100
            F +  Y+ +  E++PVN  +L V+    +   +  ++Y L+ D G++F ++   G I  +
Sbjct: 2314 FDQQSYTTTIAEDVPVNTDVLLVSATDLDAGENGNIRYTLTGDLGDKFEVNPATGQIITI 2373

Query: 101  QCLDYETEDSYRFTVYATDTLMTTSA----TVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
              LD ET+  +   V ATD+    +     TV ++V +V+D  P F     + +LP    
Sbjct: 2374 GLLDRETQSLFTMVVTATDSSAADARSSSATVTVTVSDVDDNVPAFVDRSIDAYLP---- 2429

Query: 157  ADLTP-GSVIGKVEAADGDKGDR--VTLSLRGPYEKMFSIND-SGHISIVDLSALNTSTI 212
             D  P G+ +    A D D+G    V  SL G     F+I+  +G IS     + ++S  
Sbjct: 2430 -DNAPTGTFVALASATDPDEGTNGDVRYSLSGSDANRFTIDRVTGVISTAMTLSDSSSQY 2488

Query: 213  QLVVVATDTG 222
             L + A+D G
Sbjct: 2489 NLQITASDLG 2498



 Score = 47.0 bits (110), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 47/152 (30%), Positives = 72/152 (47%), Gaps = 12/152 (7%)

Query: 76   RVKYWLSNDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNIS 131
            +V Y+L +D   +FSI S  G ISL++ LD E +  +  TV A D     +T + TV + 
Sbjct: 2244 QVDYYLPDDKDGKFSITSSDGRISLLRTLDREDQSEFLLTVLAEDRGSPRLTGTGTVRVL 2303

Query: 132  VVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGD--RVTLSLRGPYEK 189
            V +VND  P F    Y   +      D+   + +  V A D D G+   +  +L G    
Sbjct: 2304 VDDVNDNTPTFDQQSYTTTIAE----DVPVNTDVLLVSATDLDAGENGNIRYTLTGDLGD 2359

Query: 190  MFSIN-DSGHISIVDLSALNTSTI-QLVVVAT 219
             F +N  +G I  + L    T ++  +VV AT
Sbjct: 2360 KFEVNPATGQIITIGLLDRETQSLFTMVVTAT 2391



 Score = 46.2 bits (108), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 40/140 (28%), Positives = 66/140 (47%), Gaps = 12/140 (8%)

Query: 45   FSKNEYSVSALENLPVN-YVLLTVTTNKPRDL--RVKYWL--SNDYGERFSISRQGDISL 99
            FS   Y V+  E+ P+N +V   V T++   +   ++Y +   +DY + +   R G +++
Sbjct: 3054 FSAPSYQVTIEESRPMNSHVFTVVATDRDSGVNGEIRYSIVGGDDYRQFYIDPRTGSVTV 3113

Query: 100  MQCLDYETEDSYRFTVYATDTLM---TTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
               LDYET  +Y   + A D  +        + + + +VND DP F    Y+   P IP 
Sbjct: 3114 AAVLDYETTPTYHLNISARDRGLLYRENFVILTVDLTDVNDNDPMFDPATYD---PSIPE 3170

Query: 157  ADLTPGSVIGKVEAADGDKG 176
               +  SV+  V A D D G
Sbjct: 3171 NSPSGTSVV-MVTATDADTG 3189



 Score = 45.4 bits (106), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 46/160 (28%), Positives = 71/160 (44%), Gaps = 15/160 (9%)

Query: 81   LSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDTL------MTTSATVNISVVN 134
            +S D  ++FSI   G I     LD E    Y   V ATD        ++++A V I V +
Sbjct: 1934 VSGDPNDQFSIQSDGTIVTAAALDREQNYLYNLVVMATDRAIPAYMRLSSTAQVEIIVND 1993

Query: 135  VNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGD--KGDRVTLSLRGPYEKMFS 192
            +ND  PRF  P       + P+      +V+  + A D D  +   V  S+       F+
Sbjct: 1994 INDNPPRFVTPNVTSVYENSPV-----NTVVMTIRAEDPDEERNSYVEYSMASIPGNKFA 2048

Query: 193  IND-SGHISI-VDLSALNTSTIQLVVVATDTGNPPRQASV 230
            ++  +G + +  DL    T +  + V ATD G PP  AS+
Sbjct: 2049 LDSVTGQLRVNGDLDREATPSYIVTVTATDKGRPPMSASM 2088



 Score = 44.3 bits (103), Expect = 0.095,   Method: Compositional matrix adjust.
 Identities = 57/193 (29%), Positives = 89/193 (46%), Gaps = 17/193 (8%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWL-SNDYGERFSISR-QGDISL 99
            F    Y VS LE++ V   L+ V     ++  +  V+Y + S +     +I+   G IS+
Sbjct: 2104 FGPVSYDVSVLEDVAVGTELVQVVAADVDEGTNGVVRYSIVSGNTDNDLAINAVTGRISV 2163

Query: 100  MQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRF-RYPQYELFLPHIP 155
             + +D+E    Y   V A D   + +   ATV I+V +VND+ P F   P    F+ H+ 
Sbjct: 2164 ARLIDHERTTGYNLVVRARDQGTSPLEALATVTITVTDVNDYVPLFLNSP----FVAHVM 2219

Query: 156  LADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEK--MFSINDS-GHISIV-DLSALNTST 211
              D      + ++ A D D G    +    P +K   FSI  S G IS++  L   + S 
Sbjct: 2220 ENDNNVPQFVTQISAQDEDSGTMGQVDYYLPDDKDGKFSITSSDGRISLLRTLDREDQSE 2279

Query: 212  IQLVVVATDTGNP 224
              L V+A D G+P
Sbjct: 2280 FLLTVLAEDRGSP 2292



 Score = 43.1 bits (100), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 58/195 (29%), Positives = 92/195 (47%), Gaps = 18/195 (9%)

Query: 43   LQFSKNEYSVSALENLPVNYVLLTVTTNKPR-DLRVKYWLSND--YGERFSISR-QGDIS 98
             +FS  E  VS  +N+  + + ++   N  R D R   +   D   G  FSI++  G IS
Sbjct: 3370 FEFSLYEGHVSEGDNVGTSVLTVSAIDNDLRADFRSFVYGIQDGNEGSAFSINQISGIIS 3429

Query: 99   LMQCLDYETEDSYRFTVYATDTLM---TTSATVNISVVNVNDWDPRFRYPQYELFLPHIP 155
                LD ET D+Y  TV ATDT +   T +  V +++ ++ND  P F  P    ++    
Sbjct: 3430 TASRLDRETIDTYNLTVTATDTGIPPATGTTYVVVNIDDINDNGPEFIPPNVTGYV---- 3485

Query: 156  LADLTPGSVIGKVEAADGD-KGDRVTLSLR---GPYEKMFSIND-SGHISIV-DLSALNT 209
            L +  P +V+  + A D D   +R   S R   G   + F+++  SG +S    +     
Sbjct: 3486 LENRAPTTVM-TLSATDPDLDPNRGPFSYRLIGGHNSQYFTLDQGSGRLSTTRQIDREQQ 3544

Query: 210  STIQLVVVATDTGNP 224
            S   L+V  TD+G+P
Sbjct: 3545 SDFYLIVETTDSGSP 3559



 Score = 39.3 bits (90), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 51/194 (26%), Positives = 86/194 (44%), Gaps = 12/194 (6%)

Query: 44  QFSKNEYSVSALENLPVNY-VLLTVTTNKPRDLRVKYWL-SNDYGERFSISRQ-GDISLM 100
           +FS+  Y+    EN+ +   V +   T +  +    Y + S D    F I+ Q G IS  
Sbjct: 803 EFSQPGYNFVIFENVEIGKSVGMVSATFRDANANATYSIFSGDPAGIFRINSQTGLISTA 862

Query: 101 QCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYEL-FLPHIPLADL 159
           + +D E +  Y+  V A+   +     VN+++ ++ND  P F     +   + + PL   
Sbjct: 863 KEVDREQQQLYQLFVVASGGRVVGQTQVNVTLRDLNDNPPSFLTSSAQADAVENWPL--- 919

Query: 160 TPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIN-DSGHISIVDLSALNTSTIQLVV 216
             G  + +  A D D G   +VT  L       F +N DSG +S+    +       L +
Sbjct: 920 --GREVYEAAAQDPDDGVNAQVTYELITNPSNKFQVNGDSGIVSLAGALSYEVGQYVLEL 977

Query: 217 VATDTGNPPRQASV 230
            ATD G PP+ A++
Sbjct: 978 QATDRGLPPQSATL 991



 Score = 38.9 bits (89), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 53/191 (27%), Positives = 85/191 (44%), Gaps = 17/191 (8%)

Query: 45   FSKNEYSVSALENLP--VNYVLLTVT-TNKPRDLRVKYWLSNDYGERFSI--SRQGDISL 99
            F    Y  S  EN P   + V++T T  +   +  ++Y ++   G+   I  +  G+I+ 
Sbjct: 3159 FDPATYDPSIPENSPSGTSVVMVTATDADTGANAAIRYQITGGDGQDLFIIDAVTGEITS 3218

Query: 100  MQCLDYETEDSYRFTVYATDTLMTT---SATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
               LDYE +  Y   V AT+   ++   + TVNI +   N++ P F    Y   +     
Sbjct: 3219 QGGLDYERKQMYTLQVTATNVEASSRFGTCTVNIHLTGQNEYAPVFLQRLYTFEISE--- 3275

Query: 157  ADLTPGSVIGKVEAADGDKGDR--VTLSLRGPY-EKMFSIN-DSGHISIVD-LSALNTST 211
                 G+ +G V A D D G    V   L G   +K F+I  +SG I++   L    +S 
Sbjct: 3276 -SAETGTTVGTVYATDRDDGPDGIVNYILVGSSNDKGFAIGLESGAITVAQRLDRETSSH 3334

Query: 212  IQLVVVATDTG 222
            I L V+A + G
Sbjct: 3335 IILSVIAKNRG 3345



 Score = 38.5 bits (88), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 53/198 (26%), Positives = 88/198 (44%), Gaps = 26/198 (13%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLS--NDYGERFSISRQGDISL 99
            FS    +   LE+  VN ++ T+T    +   +  + Y +S  N +G     S  G + L
Sbjct: 1326 FSPTLQTADVLESTRVNDLITTLTATDGDAGSNGEITYSISEGNAHGTFTLDSYTGKLYL 1385

Query: 100  MQCLDYETEDSYRFTVYATDTLMTTSATV---NISVVNVNDWDPRFRYPQYELFLPHIPL 156
             + LDYE+ + YR  + A+D      +TV    I+V++ ND  P         F P   +
Sbjct: 1386 AKALDYESTNVYRLNITASDHGTPPLSTVIPFAINVLDSNDNPP--------TFPPGDTV 1437

Query: 157  ADLTPG----SVIGKVEAADGDKGD----RVTLSLRGPYEKMFSIN-DSGHI-SIVDLSA 206
              +T G    +VI  V A D D G     + +++ + P    F++N  SG + +  ++  
Sbjct: 1438 RQITEGVGLNTVIATVTATDPDSGSNGEIQYSIASQVPQGDQFAVNPSSGQVFTRAEIDR 1497

Query: 207  LNTSTIQLVVVATDTGNP 224
               ST  + V ATD   P
Sbjct: 1498 EFASTFDITVRATDQAIP 1515


>gi|345328979|ref|XP_001512413.2| PREDICTED: protocadherin Fat 4-like [Ornithorhynchus anatinus]
          Length = 3217

 Score = 78.2 bits (191), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 70/225 (31%), Positives = 115/225 (51%), Gaps = 16/225 (7%)

Query: 15   VRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVL--LTVTTNKP 72
            V+A    N   ++L ++ +     +    +FS++ Y++ ALEN   N V+  L VT    
Sbjct: 1550 VKASDGGNPSLHSLTSVFIQVLDVNDNPPEFSQSIYNIFALENSQSNSVIFRLKVTDKDE 1609

Query: 73   RDLRVKYWLSNDYGERFSISRQGDISLMQC--LDYETEDSYRFTVYATDTL---MTTSAT 127
                  +++ N     F + + G +SLM    LD ET   +   V+A D     +++SA 
Sbjct: 1610 AGFSQGHFVLN--STVFDVDKNGVLSLMNGVELDRETVPGFILQVWAVDAEIDGLSSSAW 1667

Query: 128  VNISVVNVNDWDPRFRYPQYELFLPHIPL-ADLTPGSVIGKVEAADGDKGDRVTLSLR-- 184
            +NI+V++VND +P F+   +   +P     AD++  +V+GKV A D D GD   +S    
Sbjct: 1668 LNITVLDVNDNNPEFQEQPFSFTIPEGRYGADVS--TVVGKVAATDLDDGDNALISFHLC 1725

Query: 185  -GPYEKMFSINDSGHISIVD-LSALNTSTIQLVVVATDTGNPPRQ 227
                E +FSI  SG+I +V+ L      T +L++VA+D G P RQ
Sbjct: 1726 SETEENVFSIKQSGNILVVNSLDREVQDTYKLLLVASDRGTPQRQ 1770



 Score = 64.7 bits (156), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 61/198 (30%), Positives = 95/198 (47%), Gaps = 17/198 (8%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKP--RDLRVKYWLSNDYGERFSISRQGDISLMQC 102
            F +  + ++  EN P   +L    T+K    +  + Y +       F     G I  +Q 
Sbjct: 2099 FPQESFRITVKENEPPQTILNVTATDKDIGYNAAIHYSIVETTSLFFIGELSGKIGTLQP 2158

Query: 103  LDYETEDSYRFTVYA---TDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADL 159
            LDYET   Y FTV A    D  +  +A V +SV +VN+  P+F  P Y  FL    L + 
Sbjct: 2159 LDYETSAQYTFTVRAFNPGDLQLQDTAQVIVSVEDVNEEGPQFDKPSYYRFL----LDNS 2214

Query: 160  TPGSVIGKVEAADG----DKGDRVTLSLRGPYEKMFSINDS-GHISIV-DLSALNTSTIQ 213
            T  +++  ++A D     D+G    ++  G +E ++ I  S G I++  DL+ LNT+ + 
Sbjct: 2215 TVNTLVVDLDATDENQRPDEGIYYNIT-DGNFEGLYKITSSTGQITLTRDLTKLNTTVMN 2273

Query: 214  -LVVVATDTGNPPRQASV 230
             L V A D+G PP   SV
Sbjct: 2274 SLTVSAMDSGQPPLSTSV 2291



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 70/236 (29%), Positives = 108/236 (45%), Gaps = 21/236 (8%)

Query: 11   ITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTN 70
            IT+ ++A Q DN+ + A A ++VS    +    +F ++ Y VS  EN P    +  +   
Sbjct: 1030 ITVEIKATQQDNELKTANAMVLVSIQDENDNLPEFERSSYMVSIPENSPDGTTVFHIKVT 1089

Query: 71   KPRDLRVK---YWLSNDYGERFSISRQGDISLMQ--CLDYETEDSYRFTVYATDTL---M 122
               +       + L  D    F I+  G IS+     LD E    Y   V ATD L    
Sbjct: 1090 DKDEGGFNGTLHILPEDSA--FQINDAGMISVKNSSVLDRERIGKYTLQVKATDHLPPHS 1147

Query: 123  TTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDR--VT 180
               A + IS+++ ND  P F+   YE  +     ++ T G  I ++ + D D G    ++
Sbjct: 1148 EAQAVITISLLDENDNSPVFKGTPYEQTI----FSNRTVGMTIVQIVSHDEDDGKNGIIS 1203

Query: 181  LSLRGPYEK-MFSIN-DSGHISI---VDLSALNTSTIQLVVVATDTGNPPRQASVP 231
            L+L G  EK  F +N  SG I++   + L A       L + ATD G+ PR +SVP
Sbjct: 1204 LTLTGGNEKGYFELNVTSGIITLKKDIILEANRFEQFTLWITATDAGDVPRSSSVP 1259



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 43/155 (27%), Positives = 73/155 (47%), Gaps = 10/155 (6%)

Query: 89   FSISRQGDISLMQCLDYETEDSYRFTVYATD--TLMTTSAT-VNISVVNVNDWDPRFRYP 145
            FSI + G+I ++  LD E +D+Y+  + A+D  T    + T V I +++VND  P+F   
Sbjct: 1733 FSIKQSGNILVVNSLDREVQDTYKLLLVASDRGTPQRQNYTYVTIGILDVNDNPPQFTKS 1792

Query: 146  QYELFLPHIPLADLTPGSVIGKVEAADGDKGDR--VTLSLRGPYEKMFSINDSGHISIVD 203
            +Y      I +     G  +  V A D D G+   ++ S   P E       +G I++  
Sbjct: 1793 EYS---AKIRVTTAQEGDFVLSVLATDLDLGNNSLISYSFSTPSEDFVIDEQTGRITLSR 1849

Query: 204  --LSALNTSTIQLVVVATDTGNPPRQASVPAIMHF 236
              +  +  + I L VVATD G  P  ++    ++ 
Sbjct: 1850 NLIHVMADTVIALTVVATDHGVSPLTSNASVALYL 1884



 Score = 48.5 bits (114), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 53/189 (28%), Positives = 82/189 (43%), Gaps = 13/189 (6%)

Query: 42   ELQFSKNEYSVSALENLPVNYVLLTVTT-NKPRDLRVKYWLSNDYGERFSISRQGDISLM 100
            +L F ++ Y  S  E  P+N ++ +V        + V Y LS+ Y + FSI  QG+I  +
Sbjct: 1892 KLTFERSSYDFSLEEEGPINALVGSVKALTGSIAVTVTYALSS-YLDNFSIDDQGNIVTV 1950

Query: 101  QCLDYETEDSYRFTVYATDTLM---TTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLA 157
              LD E +D Y F   A D+     T    + +++ ++ND  P F      L    +   
Sbjct: 1951 ARLDREEQDLYSFVAEAVDSSTPPNTAVTMITVTIRDINDNPPVFS----SLIPTTLSCP 2006

Query: 158  DLTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSINDSGH--ISIVDLSALNTSTIQ 213
            +    +  G   A D D GD  R+T  L   +   F IN+S    I+   L         
Sbjct: 2007 EGQNSTDFGIFSATDRDIGDNARITYFLEDDFGGTFQINNSTGRLITGKTLDRETKDNYT 2066

Query: 214  LVVVATDTG 222
            L ++ATD G
Sbjct: 2067 LKILATDMG 2075



 Score = 46.2 bits (108), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 43/137 (31%), Positives = 68/137 (49%), Gaps = 20/137 (14%)

Query: 95   GDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHI 154
            G+I +    DYE ++ Y         ++TT+ TV I++V++ND  PRF    Y   +  +
Sbjct: 2565 GNIKVKNPPDYEKQNQY---------ILTTNKTVTINIVDLNDNPPRFTQDDYSATVNMV 2615

Query: 155  -PLADLTPGSVIGKVEAADGDKGDRVTLSLR----GPYEKMFSINDSGHISIVDLSALNT 209
             P+A     SVI  V+A DGD+GD   +           + F I++     I+ +  L+ 
Sbjct: 2616 NPVA----SSVI-TVKAIDGDQGDNAAVEYSILPDVTISQNFLIDNPNEGRILVIGNLSV 2670

Query: 210  S-TIQLVVVATDTGNPP 225
            S  I L V+A D G+PP
Sbjct: 2671 SGEILLTVMAKDRGSPP 2687



 Score = 43.9 bits (102), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 42/143 (29%), Positives = 68/143 (47%), Gaps = 15/143 (10%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNK---PRDLRVKYWLSN----DYGERFSI-SRQGD 96
            F  ++Y+V+  EN  +  VLL  T        +  VKY +++         FSI +  G 
Sbjct: 1472 FEMSKYNVTVHENAAIGTVLLATTATDLDVGANAEVKYAIASVDPSSASPMFSINTTTGQ 1531

Query: 97   ISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
            +SL Q LD+ET   ++  V A+D     + +  +V I V++VND  P F    Y +F   
Sbjct: 1532 LSLSQPLDFETIKWFKIEVKASDGGNPSLHSLTSVFIQVLDVNDNPPEFSQSIYNIF--- 1588

Query: 154  IPLADLTPGSVIGKVEAADGDKG 176
              L +    SVI +++  D D+ 
Sbjct: 1589 -ALENSQSNSVIFRLKVTDKDEA 1610



 Score = 41.2 bits (95), Expect = 0.81,   Method: Compositional matrix adjust.
 Identities = 39/140 (27%), Positives = 62/140 (44%), Gaps = 7/140 (5%)

Query: 89   FSISRQGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYE 148
            F+I   G I     LDYE + SY   V  T   +   +TV ++V ++ND  P F      
Sbjct: 1316 FAIDSNGTIWTKTRLDYELQQSYILNVSLTQRDVIDYSTVLVNVTDINDNPPSFNMLNRT 1375

Query: 149  LFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDSGHISI-VDLS 205
            + +      ++T    +    A D D G    V+ SL+G   K+   + +G I++  DL 
Sbjct: 1376 IHVLESQRVEIT----LLNASAIDADSGYNGLVSYSLKGGESKIDIDSVTGFITLRKDLD 1431

Query: 206  ALNTSTIQLVVVATDTGNPP 225
                +   L + A+D G PP
Sbjct: 1432 REMQALYNLTITASDQGQPP 1451


>gi|340728239|ref|XP_003402435.1| PREDICTED: protein dachsous-like [Bombus terrestris]
          Length = 3327

 Score = 78.2 bits (191), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 76/240 (31%), Positives = 109/240 (45%), Gaps = 27/240 (11%)

Query: 14   VVRAIQYDNQDRYALATLIVSKAGTSLR-----ELQ--------FSKNEYSVSALENLPV 60
            + R + Y+ Q R+ L    +  AG S       E+Q        F +NEY V   E   +
Sbjct: 913  LARRLDYETQQRHGLLIRALDGAGLSANLSLSVEVQDVNDNPPVFERNEYHVEVPEGAKL 972

Query: 61   NYVLLTVTT---NKPRDLRVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYA 117
            +  +L VT    +   + R+ Y L      R S    G I L Q LD ET D +  TV A
Sbjct: 973  DSQILQVTAVDLDTGNNARLSYRLQGSTAFRIS-PNTGWIYLAQILDRETLDRHALTVLA 1031

Query: 118  TDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGD 174
            TD      T SA+V ++V++ ND DPRF    Y   L    L +L  G+++G V A+D D
Sbjct: 1032 TDNGSPAATASASVLVTVLDDNDNDPRFEKDFYGFDL----LENLPSGTLVGSVSASDPD 1087

Query: 175  KGDRVTLSLRG-PYEKMFSIN-DSGHISIVDLSALNTSTI-QLVVVATDTGNPPRQASVP 231
             G    L          F+++ D+G I+  +     T  + +LV+ A D G P R A VP
Sbjct: 1088 LGKNALLRYAVVQANSSFTVDPDTGEITTKEPLDRETKGVHELVLEARDQGTPSRAARVP 1147



 Score = 55.1 bits (131), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 55/199 (27%), Positives = 93/199 (46%), Gaps = 15/199 (7%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDLR---VKYWLSNDYGERFSI-SRQGDISLM 100
            F  +   +S  E+ P++  L       P  +    ++Y L  +  + F I  R G++ L 
Sbjct: 855  FPTSSVRISVPESHPLHSALYVAHATDPDIVPSHPIRYVLGQNSNDLFGIDGRSGELYLA 914

Query: 101  QCLDYETEDSYRFTVYATDTL-MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADL 159
            + LDYET+  +   + A D   ++ + ++++ V +VND  P F   +Y + +P     D 
Sbjct: 915  RRLDYETQQRHGLLIRALDGAGLSANLSLSVEVQDVNDNPPVFERNEYHVEVPEGAKLD- 973

Query: 160  TPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSIN-DSGHI---SIVDLSALNTSTIQLV 215
               S I +V A D D G+   LS R      F I+ ++G I    I+D   L+     L 
Sbjct: 974  ---SQILQVTAVDLDTGNNARLSYRLQGSTAFRISPNTGWIYLAQILDRETLDRHA--LT 1028

Query: 216  VVATDTGNPPRQASVPAIM 234
            V+ATD G+P   AS   ++
Sbjct: 1029 VLATDNGSPAATASASVLV 1047



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 50/170 (29%), Positives = 83/170 (48%), Gaps = 18/170 (10%)

Query: 77   VKYWLSNDYGERFSI---SRQGDISLMQCLDYETEDSYRFTVYATDTL-----MTTSATV 128
            ++Y L  ++  R S    S  G ++L + LD E    Y   + A+D       + ++ T 
Sbjct: 1412 LRYSLVAEFPSRGSFAVDSLTGALTLARPLDREERAEYMLILKASDRAPPGEQLASTVTA 1471

Query: 129  NISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGD--RVTLSLRGP 186
             I V++ ND DP F  P+           DL PG+++ +V A D D GD  RV+  +   
Sbjct: 1472 RIIVLDQNDNDPVFVAPESTKV---AVTPDLLPGAMLVRVVAVDKDAGDNGRVSYVITSA 1528

Query: 187  YEKM-FSIN-DSGHISIVDLSALNTSTIQLVVVATDTGNPPRQASVPAIM 234
             E+  FS+  +SG   IV L      + +L + A D G+PPR++++  I+
Sbjct: 1529 NEEARFSVGYESG---IVSLERPMVRSTELEITANDHGSPPRKSTLRLIL 1575



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 35/103 (33%), Positives = 54/103 (52%), Gaps = 7/103 (6%)

Query: 93   RQGDISLMQCLDYETEDSYRFTVYATDTLMTTSAT-VNISVVNVNDWDPRFRYPQYELFL 151
            + G ++     DYE  + Y FT+ ATDT   T+A  V + + + +++ P+F    Y   +
Sbjct: 2762 KSGTVTTRAVFDYELRNRYAFTLRATDTGGRTAAVRVRVEIESRDEFYPQFTERMYRFGI 2821

Query: 152  PHIPLADLTPGSVIGKVEAADGDKG--DRVTLSL--RGPYEKM 190
             +   A + PG+VIG V A D DKG   RV   L  + PY K+
Sbjct: 2822 RN--GAQVIPGTVIGHVTATDRDKGPDGRVVYQLTSQHPYFKL 2862



 Score = 47.8 bits (112), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 62/212 (29%), Positives = 92/212 (43%), Gaps = 26/212 (12%)

Query: 32   IVSKAGTSLRELQFSKN-----EYSV-SALENLPVNYVLLTVTTNKPRDLRVKYWLSNDY 85
            +   A  S+R +  + N     E+S+ S  E   V  VL T+T N   D+     L+  +
Sbjct: 2270 LTGTAALSVRVIDINDNQPTFPEHSIISVSEGTAVGTVLTTITAN---DVDSSPALTYRF 2326

Query: 86   GE-----RFSISR-QGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWD 139
            G       FSI R  G + L + LD ET   Y   V A+D +   +  + + V ++ND  
Sbjct: 2327 GNVTSPGPFSIDRYGGKVVLRRRLDAETRSEYSLQVIASDGVHEATTDLIVRVTDLNDNA 2386

Query: 140  PRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGD---KGDRVTLSLRGPYEKMFSINDS 196
            PRF+   Y   LP     DL     I  V A D D      RV   L     K FS++ +
Sbjct: 2387 PRFQQSAYIATLPE-GRGDL---QEILTVNATDDDLTEDNSRVRYYLLK-ATKGFSVHPA 2441

Query: 197  GHISIVDLSALNT---STIQLVVVATDTGNPP 225
              +  V+ +A+       ++L +VA D G PP
Sbjct: 2442 TGVLTVNRTAIPRPLPKEVELAIVAEDYGKPP 2473



 Score = 47.0 bits (110), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 51/142 (35%), Positives = 66/142 (46%), Gaps = 15/142 (10%)

Query: 95   GDISLMQCLDYETEDSYRFTVYATDT----LMTTSATVNISVVNVNDWDPRF-RYPQYEL 149
            G I+    LD E + SY F V ATD+      +T+  V I V +VND  P F  YP    
Sbjct: 1884 GVITTAGPLDRERQSSYNFVVVATDSGKYDARSTTIPVEIRVSDVNDNAPVFDEYP---- 1939

Query: 150  FLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEK-MFSINDS-GHI-SIVDL 204
            F   + +    P   I +V A D D G    V  S     EK  F I+ S G + + + L
Sbjct: 1940 FRARVSIG-TQPEKNILRVVATDADDGPNGEVVYSFLHEQEKPKFRIHPSTGAVTAALSL 1998

Query: 205  SALNTSTIQLVVVATDTGNPPR 226
            S  N  T  L V+A D GNPP+
Sbjct: 1999 SQDNGKTYHLEVLARDKGNPPK 2020



 Score = 46.6 bits (109), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 52/219 (23%), Positives = 105/219 (47%), Gaps = 23/219 (10%)

Query: 27   ALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKP---RDLRVKYWLSN 83
            A A+++V+    +  + +F K+ Y    LENLP   ++ +V+ + P   ++  ++Y +  
Sbjct: 1041 ASASVLVTVLDDNDNDPRFEKDFYGFDLLENLPSGTLVGSVSASDPDLGKNALLRYAVVQ 1100

Query: 84   DYGERFSISRQ-GDISLMQCLDYETEDSYRFTVYATDTLMTTSAT---VNISVVNVNDWD 139
                 F++    G+I+  + LD ET+  +   + A D    + A    + ++V++VND  
Sbjct: 1101 -ANSSFTVDPDTGEITTKEPLDRETKGVHELVLEARDQGTPSRAARVPLKVTVLDVNDNS 1159

Query: 140  PRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEK------MFSI 193
            P    PQ ++        +  PG+ + +V A D D G+  +++     ++      +F+I
Sbjct: 1160 PEIVDPQGDVVSVR---EEQPPGTEVARVRALDTDLGENASVTYTILKDRDSDGYNVFTI 1216

Query: 194  ND-SGHI---SIVDLSALNTSTIQLVVVATDTGNPPRQA 228
            +  +G I   +++D    N    ++ V ATD G PPR  
Sbjct: 1217 DPITGMIRTKAVLDHEERN--VYRVSVKATDAGRPPRHG 1253



 Score = 43.9 bits (102), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 53/192 (27%), Positives = 86/192 (44%), Gaps = 19/192 (9%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGERFSISR-QGDISL 99
           +F +  Y    LE       +L VT    ++  +  +KY L N     F I    G IS 
Sbjct: 441 KFGRERYEAHLLEASEPGTPVLKVTATDLDEGANSAIKYSLFN--STWFVIDETSGLIST 498

Query: 100 MQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
              +D E + +    V ATD+    +++SATV ++V ++ND +P F  P Y   +     
Sbjct: 499 RTHVDCEADPAPILLVIATDSGRPPLSSSATVRVTVHDLNDNEPIFEKPLYNATVSE--- 555

Query: 157 ADLTPGSVIGKVEAADGDKGDRVTLSL-----RGPYEKMFSINDSGHISI-VDLSALNTS 210
            D+  GS   KV+A D D G    ++      R   E++   +D+G I +   L      
Sbjct: 556 -DMPVGSCFLKVQATDPDCGVNAMVNYTLAAGRMESEQLMVRSDTGDICVRTPLDRETAP 614

Query: 211 TIQLVVVATDTG 222
            +++ V+ATD G
Sbjct: 615 YLEIPVIATDRG 626



 Score = 43.9 bits (102), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 46/135 (34%), Positives = 65/135 (48%), Gaps = 13/135 (9%)

Query: 103 LDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADL 159
           LD E +  Y  +V ATD     +    T  + V +VND  P+F   +YE  L    L   
Sbjct: 400 LDREEKPVYDLSVEATDAGTPPLRAVRTFRLLVTDVNDNAPKFGRERYEAHL----LEAS 455

Query: 160 TPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSIND-SGHISI---VDLSALNTSTIQLV 215
            PG+ + KV A D D+G    +         F I++ SG IS    VD  A + + I L+
Sbjct: 456 EPGTPVLKVTATDLDEGANSAIKYSLFNSTWFVIDETSGLISTRTHVDCEA-DPAPI-LL 513

Query: 216 VVATDTGNPPRQASV 230
           V+ATD+G PP  +S 
Sbjct: 514 VIATDSGRPPLSSSA 528



 Score = 42.0 bits (97), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 54/208 (25%), Positives = 87/208 (41%), Gaps = 39/208 (18%)

Query: 58  LPVNYVLLTVTTNKPRDLRV----------------KYWL-SNDYGERFSIS----RQG- 95
            PV++V +    N PRD +                 +Y + S ++ + F +S    R G 
Sbjct: 112 FPVDHVDVEFPENSPRDAKRALPPAKDPDLGQYSTQRYEIVSGNHADAFRLSQHRGRDGV 171

Query: 96  ---DISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYEL 149
              D+     LD E    Y   + A D     + +   VN++V +VND  P F   +Y  
Sbjct: 172 LYLDLQNSGSLDREARSRYHLVIEALDGGAPPLRSRLHVNVTVQDVNDNPPIFNQTRYVA 231

Query: 150 FLPHIPLADLTPGSVIGKVEAADGDKGD--RVTLSL---RGPYEKMFSINDSGHISIVD- 203
            +      + T G+ +  V A D D GD  R+  S+   +   E+MF I+    +  V+ 
Sbjct: 232 SIAE----NATVGTPVLAVNATDSDAGDNGRIEYSINRRQSDREEMFRIDPETGMVYVNK 287

Query: 204 -LSALNTSTIQLVVVATDTGNPPRQASV 230
            L   +    +LV+VA D G  P +AS 
Sbjct: 288 ALDFESKERHELVIVARDRGAQPLEASA 315



 Score = 42.0 bits (97), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 56/193 (29%), Positives = 84/193 (43%), Gaps = 22/193 (11%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPR---DLRVKYWLSNDYGERFSI---SRQGDIS 98
           F K  Y+ +  E++PV    L V    P    +  V Y L+    E   +   S  GDI 
Sbjct: 544 FEKPLYNATVSEDMPVGSCFLKVQATDPDCGVNAMVNYTLAAGRMESEQLMVRSDTGDIC 603

Query: 99  LMQCLDYETEDSYRFTVYATDT-LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLA 157
           +   LD ET       V ATD   ++T A V + V +VND  P F   +Y + L      
Sbjct: 604 VRTPLDRETAPYLEIPVIATDRGGLSTVAIVRVQVTDVNDNRPIFEPRKYNVTLK----- 658

Query: 158 DLTPGSVIG---KVEAADGDKGDRVTLSLR---GPYEKMFSIN-DSGHISIVDLSALNTS 210
             + G + G   ++ A D D G    ++ R   G    +F I+ ++G + +   S L+ S
Sbjct: 659 --SDGPIQGPILRLVATDLDVGLFGQVAYRITNGNEAGVFHIDRNTGELQVARPSLLSRS 716

Query: 211 TI-QLVVVATDTG 222
            + QL V ATD  
Sbjct: 717 PLHQLNVTATDAA 729



 Score = 40.8 bits (94), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 47/156 (30%), Positives = 72/156 (46%), Gaps = 18/156 (11%)

Query: 49   EYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGERFSISRQGDISLMQCLDYETE 108
            EY V+A EN      L+ ++     DL     ++ D    F ISR G + L + LD ET+
Sbjct: 2495 EYKVTAKENTLKGTTLMRLSD---VDLLDGAIVAGDNSGTFEISR-GKLILSRTLDRETK 2550

Query: 109  DSYRFTVYATDTLMTTSA-------TVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTP 161
            D Y   + + +  MTT +       TV I+V +VND  PRF    +++ +      +   
Sbjct: 2551 DKYVLRLGSKNENMTTGSLVGDEPVTVIITVEDVNDNYPRFLEDLHQVSIKE----NAAR 2606

Query: 162  GSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSG 197
            G+ +  + A D D    V  +L   YE + S ND G
Sbjct: 2607 GTTVAMLRAKDDDLAGSVAANLV--YE-ITSGNDGG 2639



 Score = 38.1 bits (87), Expect = 6.4,   Method: Compositional matrix adjust.
 Identities = 51/193 (26%), Positives = 94/193 (48%), Gaps = 27/193 (13%)

Query: 45   FSKNEYSVSALE-NLPVNYVLLTVTTNKPRDL--RVKYWLSNDYGER-FSIS--RQGDIS 98
            F++ +YS + LE N+  ++V+    ++  + +  R+ Y + +   +  F+IS    G + 
Sbjct: 2184 FTQTQYSATVLEGNVKGDFVVKLSASDADQGMNSRILYHIVDGNPDNAFTISPPYSGIVR 2243

Query: 99   LMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIP 155
                LD E  + YR T+ ATD     +T +A +++ V+++ND  P F  P++ +    I 
Sbjct: 2244 TNIVLDREIREKYRLTIIATDQGNPQLTGTAALSVRVIDINDNQPTF--PEHSI----IS 2297

Query: 156  LADLTP-GSVIGKVEAADGDKGDRVTLSLR-----GPYEKMFSINDSGHISIV--DLSAL 207
            +++ T  G+V+  + A D D    +T         GP    FSI+  G   ++   L A 
Sbjct: 2298 VSEGTAVGTVLTTITANDVDSSPALTYRFGNVTSPGP----FSIDRYGGKVVLRRRLDAE 2353

Query: 208  NTSTIQLVVVATD 220
              S   L V+A+D
Sbjct: 2354 TRSEYSLQVIASD 2366


>gi|383861450|ref|XP_003706199.1| PREDICTED: protein dachsous-like [Megachile rotundata]
          Length = 2659

 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 75/240 (31%), Positives = 109/240 (45%), Gaps = 27/240 (11%)

Query: 14  VVRAIQYDNQDRYALATLIVSKAGTSLR-----ELQ--------FSKNEYSVSALENLPV 60
           + R + Y+ Q R+ L    +  AG S       E+Q        F +NEY V   E   +
Sbjct: 244 LARRLDYETQQRHGLLIRALDGAGLSANLSLSVEVQDVNDNPPVFERNEYHVEVPEGAKL 303

Query: 61  NYVLLTVTT---NKPRDLRVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYA 117
           +  +L VT    +   + R+ Y L      R S    G I L Q LD E+ D +  TV A
Sbjct: 304 DSQILQVTAVDLDTGNNARLSYRLQGSSAFRIS-PNTGWIYLAQILDRESLDRHALTVLA 362

Query: 118 TDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGD 174
           TD      T SA+V ++V++ ND DPRF    Y   L    L +L  G+++G V A+D D
Sbjct: 363 TDNGSPAATASASVLVTVLDDNDNDPRFEKDFYGFEL----LENLPSGTLVGSVSASDPD 418

Query: 175 KGDRVTLSLRG-PYEKMFSIN-DSGHISIVDLSALNTSTI-QLVVVATDTGNPPRQASVP 231
            G    L          F+++ D+G I+  +     T  + +LV+ A D G P R A VP
Sbjct: 419 LGKNALLRYAVVQANSSFTVDPDTGEITTREPLDRETKGVHELVLEARDQGTPSRAARVP 478



 Score = 54.7 bits (130), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 49/164 (29%), Positives = 82/164 (50%), Gaps = 12/164 (7%)

Query: 77  VKYWLSNDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDTL-MTTSATVNISVVN 134
           ++Y L  +  + F I  R G++ L + LDYET+  +   + A D   ++ + ++++ V +
Sbjct: 221 LRYVLGQNSNDLFGIDGRTGELYLARRLDYETQQRHGLLIRALDGAGLSANLSLSVEVQD 280

Query: 135 VNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSIN 194
           VND  P F   +Y + +P     D    S I +V A D D G+   LS R      F I+
Sbjct: 281 VNDNPPVFERNEYHVEVPEGAKLD----SQILQVTAVDLDTGNNARLSYRLQGSSAFRIS 336

Query: 195 -DSGHI---SIVDLSALNTSTIQLVVVATDTGNPPRQASVPAIM 234
            ++G I    I+D  +L+     L V+ATD G+P   AS   ++
Sbjct: 337 PNTGWIYLAQILDRESLDRHA--LTVLATDNGSPAATASASVLV 378



 Score = 51.6 bits (122), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 57/192 (29%), Positives = 89/192 (46%), Gaps = 17/192 (8%)

Query: 48   NEYSVSALENLPVNYVLLTVTTNKPR---DLRVKYWLSNDYGERFSISR-QGDISLMQCL 103
            N+Y  +  E++  +  +++V    P    + ++ Y ++ +    F +    G I+    L
Sbjct: 1164 NKYVATISEDVAPDSSIMSVKATDPDQGVNGKITYSIAEETSWLFRVDNLTGVITTAGSL 1223

Query: 104  DYETEDSYRFTVYATDT----LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADL 159
            D E ++SY F V ATD+      TTS  V I V +VND  P F   +   F   + +   
Sbjct: 1224 DRERQNSYNFMVVATDSGKYDAKTTSVPVEIRVSDVNDNGPVF---EEHPFRARVSIG-T 1279

Query: 160  TPGSVIGKVEAADGDKG--DRVTLSLRGPYEK-MFSINDS-GHI-SIVDLSALNTSTIQL 214
             P   I +V A D D+G    +  S     EK  F I+ S G + + + LS  N  T  L
Sbjct: 1280 QPEKNILRVVATDADEGANGEIIYSFLHEQEKPKFRIHPSTGAVTAALSLSQDNGKTYHL 1339

Query: 215  VVVATDTGNPPR 226
             V+A D GNPP+
Sbjct: 1340 EVLARDKGNPPK 1351



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 49/166 (29%), Positives = 79/166 (47%), Gaps = 18/166 (10%)

Query: 77  VKYWLSNDYGERFSI---SRQGDISLMQCLDYETEDSYRFTVYATDTL-----MTTSATV 128
           ++Y L  ++  R S    S  G ++L + LD E    Y   + A+D       + ++ T 
Sbjct: 743 LRYGLVAEFPSRGSFAVDSLTGALTLARPLDREERAEYTLILKASDRAPPGEQLASTVTA 802

Query: 129 NISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGD--RVTLSLRGP 186
            I V++ ND DP F  P+           DL PG+ + +V A D D GD  RV+  +   
Sbjct: 803 RIIVLDQNDNDPVFVAPESTKV---AVTPDLLPGATLVRVVAVDKDAGDNGRVSYVITSA 859

Query: 187 YEK-MFSIN-DSGHISIVDLSALNTSTIQLVVVATDTGNPPRQASV 230
            E+  FS+  +SG   IV L      + +L + A D G PPR++++
Sbjct: 860 NEESRFSVGYESG---IVSLERPMVRSTELEITANDHGTPPRKSTL 902



 Score = 46.6 bits (109), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 52/219 (23%), Positives = 106/219 (48%), Gaps = 23/219 (10%)

Query: 27  ALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKP---RDLRVKYWLSN 83
           A A+++V+    +  + +F K+ Y    LENLP   ++ +V+ + P   ++  ++Y +  
Sbjct: 372 ASASVLVTVLDDNDNDPRFEKDFYGFELLENLPSGTLVGSVSASDPDLGKNALLRYAVVQ 431

Query: 84  DYGERFSISRQ-GDISLMQCLDYETEDSYRFTVYATDTLMTTSAT---VNISVVNVNDWD 139
                F++    G+I+  + LD ET+  +   + A D    + A    + ++V++VND  
Sbjct: 432 -ANSSFTVDPDTGEITTREPLDRETKGVHELVLEARDQGTPSRAARVPLKVTVLDVNDNS 490

Query: 140 PRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEK------MFSI 193
           P    PQ ++        +  PG+ + +V A D D G+  +++     ++      +F+I
Sbjct: 491 PEIVDPQGDVVSVR---EEQPPGTEVARVRALDTDLGENASVTYTILKDRDSDGYNVFTI 547

Query: 194 ND-SGHI---SIVDLSALNTSTIQLVVVATDTGNPPRQA 228
           +  +G I   +++D    N    ++ V ATD G PPR +
Sbjct: 548 DPITGMIRTKAVLDHEERN--VYRVSVKATDAGRPPRHS 584



 Score = 45.1 bits (105), Expect = 0.064,   Method: Compositional matrix adjust.
 Identities = 58/212 (27%), Positives = 90/212 (42%), Gaps = 25/212 (11%)

Query: 32   IVSKAGTSLRELQFSKNEYS------VSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDY 85
            +   A  S+R +  + N+ +      +SA E   V  VL T+T N   D+     L   +
Sbjct: 1601 LTGTAALSIRVIDINDNQPTFPEHRIISASEGTAVGTVLTTITAN---DVDSSPALIYRF 1657

Query: 86   GE-----RFSISR-QGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWD 139
            G       FSI +  G + L + LD ET   Y   V A+D +   +  + + V ++ND  
Sbjct: 1658 GNVTSPGPFSIDKYGGKVVLRRRLDAETRSEYSLQVIASDGIHEATTDLVVRVTDLNDNA 1717

Query: 140  PRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGD---KGDRVTLSLRGPYEKMFSINDS 196
            P F+   Y   LP     +L     I  V A D D      RV   L+    K FS++  
Sbjct: 1718 PIFQQSAYIATLPEGGRGEL---QEILTVNATDDDLTEDNSRVRYYLQ-KATKGFSVHPV 1773

Query: 197  GHISIVDLSALNT---STIQLVVVATDTGNPP 225
              +  V+ +A+       ++L +VA D G PP
Sbjct: 1774 TGVLTVNRTAIPRPLPREVELAIVAEDYGKPP 1805



 Score = 44.3 bits (103), Expect = 0.095,   Method: Compositional matrix adjust.
 Identities = 34/103 (33%), Positives = 51/103 (49%), Gaps = 7/103 (6%)

Query: 93   RQGDISLMQCLDYETEDSYRFTVYATDTLMTTSAT-VNISVVNVNDWDPRFRYPQYELFL 151
            + G ++     DYE  + Y FT+ ATDT   T+A  V   + + +++ P+F    Y   +
Sbjct: 2094 KSGTVTTRAIFDYELRNRYAFTLRATDTGGRTAAVRVRGEIESRDEFYPQFTERMYRFGI 2153

Query: 152  PHIPLADLTPGSVIGKVEAADGDKG--DRVTLSL--RGPYEKM 190
                   + PG+VIG V A D DKG   RV   L  + PY K+
Sbjct: 2154 KS--GTQVLPGTVIGHVTATDRDKGPDGRVVYQLTSQHPYFKL 2194



 Score = 40.4 bits (93), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 36/133 (27%), Positives = 62/133 (46%), Gaps = 15/133 (11%)

Query: 49   EYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGERFSISRQGDISLMQCLDYETE 108
            EY ++  EN      L+ ++     DL     ++ D    F +SR G + L + LD ET+
Sbjct: 1827 EYKITVKENASKGTTLMRLSD---VDLLDGAIVAGDDSGTFEVSR-GKLMLSKTLDRETK 1882

Query: 109  DSYRFTVYATDTLMTTSA-------TVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTP 161
            D Y   + + +  MTT +       TV ++V +VND  PRF    +++F+      +   
Sbjct: 1883 DRYVLRLGSKNENMTTGSLVGDEPITVIVTVEDVNDNYPRFLEELHQVFIKE----NAAR 1938

Query: 162  GSVIGKVEAADGD 174
            G+ +  + A D D
Sbjct: 1939 GTTVATLRAKDDD 1951


>gi|156361309|ref|XP_001625460.1| predicted protein [Nematostella vectensis]
 gi|156212295|gb|EDO33360.1| predicted protein [Nematostella vectensis]
          Length = 460

 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 62/204 (30%), Positives = 110/204 (53%), Gaps = 17/204 (8%)

Query: 45  FSKNEYSVSALENLPVN-YVLLTVTTNKPR--DLRVKYWLSND-YGERFSIS-RQGDISL 99
           F +  YSVS  EN+ V  ++LL    +K    +  ++Y+L +    +RFS++   G I++
Sbjct: 120 FDQEVYSVSIPENITVGAHILLLNARDKDEGVNAEIRYFLKDAIVSKRFSMNDTTGQITI 179

Query: 100 MQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
            Q +DYE   SY F V+A+D     +T S++V I++++VND  P F   +Y + L    +
Sbjct: 180 KQAVDYEERSSYSFEVFASDGGEARLTGSSSVRITIIDVNDNRPYFLPTRYYVQL----V 235

Query: 157 ADLTPGSVIGKVEAADGDKG--DRVTLS-LRGPYEKMFSINDSGHISIVD--LSALNTST 211
            ++  G+ + ++ A+D D     +V  S L G  +  FSI+ +  +   +  L   + + 
Sbjct: 236 ENVAIGTTVTQLTASDLDSSLNGKVLFSILEGNSDGKFSIDQNTGVVTTNKSLDYEDVTE 295

Query: 212 IQLVVVATDTGNPPRQASVPAIMH 235
             LV+ ATD G+PP  +S P ++H
Sbjct: 296 YTLVIQATDCGDPPLNSSQPGMLH 319


>gi|403271744|ref|XP_003927769.1| PREDICTED: protocadherin Fat 4 [Saimiri boliviensis boliviensis]
          Length = 4981

 Score = 76.3 bits (186), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 80/270 (29%), Positives = 122/270 (45%), Gaps = 44/270 (16%)

Query: 2    INEDD-----FLQPITLV---VRAIQYDNQDRYALATLIVSKAGTSLRELQ--------- 44
            +NEDD     FL PIT V    R + Y+ Q  Y L T+     G     ++         
Sbjct: 1880 VNEDDEDGIFFLNPITGVFNLTRVLDYEVQQYYIL-TVRAEDGGGQFTTIRVYFNILDIN 1938

Query: 45   -----FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWL-SNDYGERFSISRQG 95
                 FS N YS S +ENLPV   +L        D    ++ Y + S D   +F++ + G
Sbjct: 1939 DNPPIFSLNSYSTSLMENLPVGSTVLVFNVTDADDGINSQLAYSIASGDSLGQFTVDKNG 1998

Query: 96   DISLMQCLDYETEDSYRFTVYATD------TLMTTSATVNISVVNVNDWDPRFRYPQYEL 149
             + +++ LD E++  Y   V   D      +  T++A V+I +++VND  P F  P+   
Sbjct: 1999 VLKVLKALDRESQSFYNLVVQVHDLPQIPASRFTSTAQVSIILLDVNDNPPTFLSPK--- 2055

Query: 150  FLPHIPLADLTP-GSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIND-SGHISIV-DL 204
             L +IP  + TP  +V+ K +A D D G    +  +L  P    FSI    G + +  +L
Sbjct: 2056 -LTYIP--ENTPIDTVVFKAQATDPDSGPNSYIEYTLLNPLGSKFSIGTIDGEVRLTGEL 2112

Query: 205  SALNTSTIQLVVVATDTGNPPRQASVPAIM 234
                 S   L VVATD G PP  +S   ++
Sbjct: 2113 DREEVSNYTLTVVATDKGQPPLSSSAEVVV 2142



 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 58/184 (31%), Positives = 91/184 (49%), Gaps = 16/184 (8%)

Query: 56   ENLPVNYVLLTVTTNKPR---DLRVKYWLSNDYGERFSISR-QGDISLMQCLDYETEDSY 111
            EN P++ V+       P    +  ++Y L N  G +FSI    G++ L   LD E   +Y
Sbjct: 2061 ENTPIDTVVFKAQATDPDSGPNSYIEYTLLNPLGSKFSIGTIDGEVRLTGELDREEVSNY 2120

Query: 112  RFTVYATDTL---MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKV 168
              TV ATD     +++SA V + V+++ND +P F    Y++ +    L     G+ I +V
Sbjct: 2121 TLTVVATDKGQPPLSSSAEVVVMVLDINDNNPIFAQALYKVEINENTLT----GTDIIQV 2176

Query: 169  EAADGDKGDRVTLS---LRGPYEKMFSIND-SGHISIVD-LSALNTSTIQLVVVATDTGN 223
             AADGD+G    +    + G   + F I+  +G I++   L    T T  L V ATD G+
Sbjct: 2177 FAADGDEGTNGQVRYGIVNGNTNQEFRIDSVTGAITVAKPLDREKTPTYLLTVQATDRGS 2236

Query: 224  PPRQ 227
             PR+
Sbjct: 2237 TPRK 2240



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 60/192 (31%), Positives = 90/192 (46%), Gaps = 24/192 (12%)

Query: 50   YSVSALENLPVNYVLLTVTTNKPRDLRV----KYWLSNDYGERFSIS-RQGDISLMQCLD 104
            +S    EN P+ Y +  VTT+   D+ +    +Y +  D    F+I+   GDI + + L+
Sbjct: 2777 FSAHVPENSPLGYTVTRVTTSD-EDIGINAISRYSIM-DTSLPFTINPSTGDIIISRPLN 2834

Query: 105  YETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSV 164
             E  D YR  V A D+  T S  V I V +VND  PRF  P Y L  P +       GS 
Sbjct: 2835 REDTDRYRIRVSAHDSGWTVSTDVTIFVTDVNDNAPRFSRPSYYLDCPEL----TETGSK 2890

Query: 165  IGKVEAADGDKGD--RVTLSLRGPYEKMFSIN-DSGHI---------SIVDLSALNTSTI 212
            + +V A D D+G   +V   ++   E  F IN  +G I         ++   S +N +  
Sbjct: 2891 VTQVSATDPDEGSNGQVFYFIKSQSE-YFRINATTGEIFNKQILKYQNVTGFSNVNINRH 2949

Query: 213  QLVVVATDTGNP 224
              +V ++D GNP
Sbjct: 2950 SFIVTSSDRGNP 2961



 Score = 57.8 bits (138), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 47/158 (29%), Positives = 82/158 (51%), Gaps = 13/158 (8%)

Query: 87   ERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRF 142
             +F+I S  G ++L+  LDYE   +Y   + A D+    + ++ T+NI +++ ND  P F
Sbjct: 1256 RQFAIDSTSGQVALIGKLDYEATPTYSLVIEAVDSGTISLNSTCTLNIDILDENDNTPSF 1315

Query: 143  RYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTL--SLRGPY-EKMFSIN-DSGH 198
              P+  LF+    L ++  G ++  V A D D GD   L  S+ G      FSI+ ++G 
Sbjct: 1316 --PKTTLFVD--VLENMRIGELVSSVTATDSDSGDNADLHYSITGTNNHGTFSISPNTGS 1371

Query: 199  ISIVDLSALNTSTI-QLVVVATDTGNPPRQASVPAIMH 235
            I +       T ++ +L + A D G PPR +++  ++H
Sbjct: 1372 IFLAKKLDFETQSLYKLNITAKDQGRPPRSSTMSVVIH 1409



 Score = 54.3 bits (129), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 58/198 (29%), Positives = 88/198 (44%), Gaps = 24/198 (12%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLS-NDYGERFSISRQGDISLM 100
            F +  Y V+  E+ PVN     V     +   +  + Y ++  + G+ F I   G + + 
Sbjct: 996  FDQLSYEVTLSESEPVNSRFFKVQASDKDSGANGEIAYAIAEGNTGDAFGIFPDGQLYIK 1055

Query: 101  QCLDYETEDSYRFTVYATDTLMTT-SATVNISVV--NVNDWDPRFRYPQYELFLPHIPLA 157
              LD E +D Y   V A+D  +   SATVN++V+  +VND  P F    Y  +      A
Sbjct: 1056 SELDRELQDRYVLMVVASDRAVEPLSATVNVTVILEDVNDNRPLFNSTNYTFYFEEEQRA 1115

Query: 158  DLTPGSVIGKVEAADGDKGD----RVTLSLRGPYEKMFSINDSGHIS---IVDLSAL--- 207
                GS +GKV A D D G     R +  +  P  ++ +I  SG I+     D  +L   
Sbjct: 1116 ----GSFVGKVSAVDKDFGPNGEVRYSFEMVQPDFELHAI--SGEITNTHQFDRESLMRR 1169

Query: 208  -NTSTIQLVVVATDTGNP 224
              T+     V+ATD G P
Sbjct: 1170 RGTAVFTFTVIATDQGLP 1187



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/101 (32%), Positives = 48/101 (47%), Gaps = 5/101 (4%)

Query: 77   VKYWLSNDYGERFSIS-RQGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNV 135
            V Y + +   + F I    GD+   + LD E    Y   V A D L ++   +NI+V +V
Sbjct: 1775 VTYTIISGADDSFRIDPESGDLIATRRLDRERRSKYSLLVRADDGLQSSDMRINITVSDV 1834

Query: 136  NDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG 176
            ND  P+F  P Y   +P     D  PGS++  + A D D G
Sbjct: 1835 NDHTPKFSRPVYSFDIPE----DTIPGSLVAAILATDDDSG 1871



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 57/190 (30%), Positives = 96/190 (50%), Gaps = 15/190 (7%)

Query: 56   ENLPVNYVLLTVTTNKPRDLRVKYWL-SNDYGERFSISR-QGDISLMQCLDYETEDSYRF 113
            E+ PV+ ++ T+T +  R   + Y++ S + G  F I +  G +S+ Q LD+E    Y  
Sbjct: 2578 ESQPVSSLVTTITGSSMRGEPMSYYIASGNLGSTFQIDQLTGQVSISQPLDFEKIQKYVI 2637

Query: 114  TVYATDTLM---TTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEA 170
             + A D      ++   ++I+V++VND  P F+    + F+  I L +L+P  V+  V A
Sbjct: 2638 WIEARDGGFPPFSSYEKLDITVLDVNDNAPIFKE---DPFVSEI-LENLSPRKVL-TVSA 2692

Query: 171  ADGDKGDRVTLS---LRGPYEKMFSINDS-GHI-SIVDLSALNTSTIQLVVVATDTGNPP 225
             D D G    L    + G  E  F+IN + G I SI  L     S   L + ++D G+P 
Sbjct: 2693 MDKDSGPNGQLDYEIVNGNMENSFTINHATGEIRSIRPLDREKISHYVLTIKSSDKGSPS 2752

Query: 226  RQASVPAIMH 235
            + ASV  +++
Sbjct: 2753 QSASVKVMIN 2762



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 51/180 (28%), Positives = 80/180 (44%), Gaps = 34/180 (18%)

Query: 89   FSISRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYP 145
            F++S  G++ + Q LD ET++ +  T+ ATD+    +T + T+N+ V +VND  P F   
Sbjct: 2308 FTLSASGELRVTQSLDRETKEHFVLTITATDSGSPALTGTGTINVIVDDVNDNVPTFASK 2367

Query: 146  QYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDS-GHI---SI 201
             Y   +P     D   G+ +  V A+D D      + + G     F+IN S G I   ++
Sbjct: 2368 SYFTTIPE----DAPTGTDVLLVNASDADTSTNAVIRIIGG-NSQFTINPSTGQIITSAL 2422

Query: 202  VDLSALNTSTIQLVVVATDTG--------------------NPPRQASVPAIMHFPEAIV 241
            +D    +  T  L+VV +D G                    NPPR    P + H P   V
Sbjct: 2423 LDRETKDNYT--LLVVCSDAGFPEPLSSSTSVLVTVTDVNDNPPRFQHHPYVTHIPSPTV 2480



 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 51/193 (26%), Positives = 97/193 (50%), Gaps = 12/193 (6%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRDLR--VKYWLS-NDYGERFSISR-QGDISLM 100
           FS+  YS    EN+ + Y + +V+ +   DL   + Y ++  D    F+I++  G ++  
Sbjct: 793 FSQVAYSFVVFENVALGYHVGSVSAST-MDLNSNITYLITTGDQKGMFAINQVTGQLTTA 851

Query: 101 QCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLT 160
             +D E +  Y+  V A+   +T    VNI+V ++ND  P F      + +    + +  
Sbjct: 852 NVIDREEQSFYQLKVVASGGTVTGDTVVNITVKDLNDNSPHFLQAIESVNV----VENWQ 907

Query: 161 PGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIND-SGHISIVDLSALNTSTIQLVVV 217
            G  I + +A D D+G    V  SL+   + +F+IN+ +G IS++    ++  + Q+ ++
Sbjct: 908 AGHSIFQAKAVDPDEGVNGMVLYSLKQNPKNLFAINEKNGTISLLGPLDVHAGSYQIEIL 967

Query: 218 ATDTGNPPRQASV 230
           A+D G P   +SV
Sbjct: 968 ASDMGVPQLSSSV 980



 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 72/237 (30%), Positives = 104/237 (43%), Gaps = 22/237 (9%)

Query: 11  ITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNE-YSVSALENLPVNYVLLTVTT 69
           I L + A       + + A L+V+    +  +  F++ E Y VS +EN P    LL +  
Sbjct: 548 IVLNISARDQGVHPKVSYAQLVVTLLDVNDEKPVFNQPEGYDVSVVENAPTGTELLVLRA 607

Query: 70  NKPRDL----RVKYWLSNDYGERFSISR---QGDISLMQCLDYETEDSYRFTVYATDTL- 121
               DL     V++ L     +R S       G +S +  LD E +  Y   V ATD   
Sbjct: 608 TD-GDLGDNGTVRFSLQEAETDRRSFRLDPVSGRLSTISSLDREDQAFYSLLVLATDMGS 666

Query: 122 --MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRV 179
              ++ A +N+S++++ND  P F   QY     HI   +   GS I  V A D D G   
Sbjct: 667 PPQSSMARINVSLLDINDNSPVFYPVQY---FAHIK-ENEPGGSYITTVSATDPDLGTNG 722

Query: 180 TL--SLRGPYEKMFSIN-DSGHISI-VDLSALNTSTIQLVVVATDTGN--PPRQASV 230
           T+  S+       F +N  SG IS  + L     +  QL +VATD GN   P QA V
Sbjct: 723 TVKYSISAGDRSRFQVNAQSGVISTRMALDREEKTAYQLQIVATDGGNLQSPNQAIV 779



 Score = 44.7 bits (104), Expect = 0.072,   Method: Compositional matrix adjust.
 Identities = 44/161 (27%), Positives = 74/161 (45%), Gaps = 16/161 (9%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGERFSIS-RQGDISLM 100
            F  ++Y  + LEN P    ++ +     +   +  + Y + +   + F I    G I+  
Sbjct: 3194 FLSDDYFPTVLENAPSGTTVIHLNATDADSGTNAVIAYTVQSSDSDLFVIDPNTGVITTQ 3253

Query: 101  QCLDYETEDSYRFTVYA---TDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLA 157
              LD+ET+ SY  TV A    D    + ATVN+ +   N++ PRF    Y     +  ++
Sbjct: 3254 GFLDFETKQSYHLTVKAFNVPDEERCSFATVNVQLKGTNEYVPRFVSKLY-----YFEIS 3308

Query: 158  DLTP-GSVIGKVEAAD---GDKGDRVTLSLRGPYEKMFSIN 194
            +  P G+V+G+V A+D   G  G+   L      +K F IN
Sbjct: 3309 EAAPKGTVVGEVFASDRDLGTDGEVHYLIFGNSRKKGFQIN 3349



 Score = 43.5 bits (101), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 48/180 (26%), Positives = 83/180 (46%), Gaps = 14/180 (7%)

Query: 6    DFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLL 65
            D  Q   + V A    N    + AT+ ++    +    +FS++  S +  E+  +  ++ 
Sbjct: 3050 DLNQNFFITVTAKDKGNPPLSSQATVQITVTEENYHTPEFSQSHMSATIPESHGIGSIVR 3109

Query: 66   TVTTNKPRDLR----VKYWLSNDYGER-FSI-SRQGDISLMQCLDYETEDSYRFTVYATD 119
            TV+  + RD      +KY +S+   E  F+I S  G ++L + LDYE    +  T+ ATD
Sbjct: 3110 TVSA-RDRDTAMNGLIKYSISSGNEEGIFAINSSTGVLTLAKALDYELCQKHEMTISATD 3168

Query: 120  ---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG 176
                  T   +V ++V++VND  P F    Y    P + L +   G+ +  + A D D G
Sbjct: 3169 GGWVARTGYCSVTVNVIDVNDNSPVFLSDDY---FPTV-LENAPSGTTVIHLNATDADSG 3224



 Score = 40.8 bits (94), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 55/108 (50%), Gaps = 7/108 (6%)

Query: 89   FSISRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYP 145
            FS+S  G +S  + +D E    +  +V   D+    M+++ TV+I+V++ ND   + R  
Sbjct: 3558 FSLSTAGVLSTTREIDREQIADFYLSVVTKDSGVPQMSSTGTVHITVIDQNDNPSQSR-- 3615

Query: 146  QYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSI 193
              E+F+ +    +L PG ++G V+  D D  D    SL      +FSI
Sbjct: 3616 TVEIFVNY--YGNLFPGGILGSVKPQDPDVLDSFHCSLTSGVTSLFSI 3661


>gi|345327140|ref|XP_001505705.2| PREDICTED: protocadherin Fat 4 [Ornithorhynchus anatinus]
          Length = 1703

 Score = 76.3 bits (186), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 74/235 (31%), Positives = 110/235 (46%), Gaps = 17/235 (7%)

Query: 13  LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKP 72
           L VRA    +  R A A ++V+    +    +FS+  +S S  EN PV + +   TT+  
Sbjct: 421 LTVRASDRGDPPRSATARVVVNVLDENDHSPRFSQ-LFSASVPENAPVGFTVTRATTSDE 479

Query: 73  RDLR--VKYWLSNDYGERFSIS-RQGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVN 129
            + +  V  +   D G  F+I    GDI++ + LD E    YR  V A D+  T S  V 
Sbjct: 480 DEGQNAVSRYSIADSGLPFAIDPSTGDITVSRPLDREDVARYRIRVSAHDSGWTVSTDVA 539

Query: 130 ISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPY 187
           ++V +VND  PRFR P Y L  P +P      GS + +V A D D+G   +V   L+ P 
Sbjct: 540 VAVTDVNDNAPRFREPSYFLECPELPEV----GSGVARVAATDPDEGPNGQVFYLLKSPS 595

Query: 188 EKMFSINDSGHI-SIVDLSALN-TSTIQ-----LVVVATDTGNPPRQASVPAIMH 235
           E       +G I +   L  LN T ++       VV  +D G+PP  +     +H
Sbjct: 596 EFFRVDAVTGEIFNKQPLRYLNGTGSVHANRHSFVVTCSDRGSPPLLSETTVTVH 650



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 62/223 (27%), Positives = 100/223 (44%), Gaps = 19/223 (8%)

Query: 29  ATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVT---TNKPRDLRVKYWLSNDY 85
            T+IV+    +     F+++ ++ S  E+ P    +L       +   +  V Y L+   
Sbjct: 26  GTVIVTVEDENDNTPTFARSLFTASISEDAPAGTDVLLANCSDADASSNALVSYQLTG-- 83

Query: 86  GE-RFSIS-RQGDISLMQCLDYETEDSYRFTVYATD----TLMTTSATVNISVVNVNDWD 139
           GE +FSI+   G I     LD ET+ +Y   V A D      +++SATV +SV +VND  
Sbjct: 84  GESQFSINPSTGQIITSGPLDRETQANYTLIVVARDGGDPLALSSSATVLVSVADVNDNP 143

Query: 140 PRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTL--SLRGPYEKMFSINDS- 196
           PRF   Q+  ++ H+P +    G  +  V   D D G    L  SL G + + F I+ + 
Sbjct: 144 PRF---QHHPYVTHVP-SPAAAGLFVFAVTVTDPDTGPNSELHFSLSGSHSERFRIDPTR 199

Query: 197 GHISIVDLSALNTSTIQLVVVATDTGNPPRQASVPAIMHFPEA 239
           G I+  +  A   + +   V   D G  P+  S    + F  A
Sbjct: 200 GAITAAEPLA-GEAEVTFSVHVRDGGRSPQADSTTVTVRFAAA 241



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 59/201 (29%), Positives = 88/201 (43%), Gaps = 17/201 (8%)

Query: 45   FSKNEYSVSALENLPVNYVLLTV---TTNKPRDLRVKYWLSNDYGERFSIS-RQGDISLM 100
            F+  EY+    EN P    ++T+     +   +  V Y L    G+ F++    G +S  
Sbjct: 872  FAGAEYTPEVAENAPSGTPVVTLRATDADSGPNAVVAYALHEADGDLFAVDPNTGVVSTQ 931

Query: 101  QCLDYETEDSYRFTVYA---TDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLA 157
              LDYET   +R TV A    D      A V + V  VN++ PRF    Y   +      
Sbjct: 932  GFLDYETRREHRLTVKAFNVPDEERCAFAAVTVRVTGVNEYIPRFVSAAYGFEVSEAA-- 989

Query: 158  DLTPGSVIGKVEAADGDKG--DRVTLSLRG-PYEKMFSIN-DSGHISIVD-LSALNTSTI 212
               PG+ +G+V A D D+G    V+  L G    K F +  ++G IS+   L      T+
Sbjct: 990  --PPGTPVGQVFAGDRDRGPDGEVSYLLFGESRRKGFRVERETGQISVAGPLDREREGTV 1047

Query: 213  QLVVVATDTGNPPRQASVPAI 233
             L V+A + G P R A V  +
Sbjct: 1048 ALRVLAKNAG-PIRGADVDEV 1067



 Score = 42.4 bits (98), Expect = 0.40,   Method: Composition-based stats.
 Identities = 61/231 (26%), Positives = 97/231 (41%), Gaps = 26/231 (11%)

Query: 13   LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEY----SVSALENLPVNYVLLTVT 68
            L V+A    +++R A A + V   G +    +F    Y    S +A    PV  V     
Sbjct: 944  LTVKAFNVPDEERCAFAAVTVRVTGVNEYIPRFVSAAYGFEVSEAAPPGTPVGQVFAGDR 1003

Query: 69   TNKPRDLRVKYWLSNDYGER-FSISRQ-GDISLMQCLDYETEDSYRFTVYATDTLMTTSA 126
               P D  V Y L  +   + F + R+ G IS+   LD E E +    V A +      A
Sbjct: 1004 DRGP-DGEVSYLLFGESRRKGFRVERETGQISVAGPLDREREGTVALRVLAKNAGPIRGA 1062

Query: 127  -----TVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDK---GDR 178
                  VN++V++ ND  P F    Y + +       + PG+ +  V AAD D      R
Sbjct: 1063 DVDEVAVNVTVLDAND-PPVFGAETYRVRISE----GVPPGTHVTFVGAADADSVPAWSR 1117

Query: 179  VTLSLRGPYEKMFSIN-DSGHISIVDLSALNTSTI---QLVVVATDTGNPP 225
             +  +       FS++  +G +++   + L+  T+    L V+A DTG PP
Sbjct: 1118 FSYRVGPAGGDAFSVHPQTGQVTVT--APLDRETLPVYNLTVLAVDTGTPP 1166



 Score = 41.6 bits (96), Expect = 0.63,   Method: Composition-based stats.
 Identities = 46/169 (27%), Positives = 76/169 (44%), Gaps = 22/169 (13%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPR--DLRVKYWL--SNDYGERFSISR-QGDISL 99
           F ++ +     ENLP   VL     ++    + ++ Y +   N+ G  F+I R  G+I  
Sbjct: 349 FREDPFVAEIAENLPPRRVLAVAAADRDSGPNGQLDYGIVAGNEEGH-FAIHRATGEIRS 407

Query: 100 MQCLDYETEDSYRFTVYAT---DTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
            + LD E+   YR TV A+   D   + +A V ++V++ ND  PRF     +LF   +P 
Sbjct: 408 TRPLDRESVPRYRLTVRASDRGDPPRSATARVVVNVLDENDHSPRFS----QLFSASVP- 462

Query: 157 ADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSGHISIVDLS 205
            +   G  + +   +D D+G              +SI DSG    +D S
Sbjct: 463 ENAPVGFTVTRATTSDEDEGQNAV--------SRYSIADSGLPFAIDPS 503



 Score = 38.5 bits (88), Expect = 6.3,   Method: Composition-based stats.
 Identities = 45/159 (28%), Positives = 72/159 (45%), Gaps = 16/159 (10%)

Query: 27  ALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSN 83
           A   ++V++A     E  F ++   V   E L V  V+  +     +   +  + Y +S 
Sbjct: 751 ATVRILVTEANAHTPE--FPRDRVRVEVPETLAVGAVVCVLAARDADPAENGLLAYAVSA 808

Query: 84  DYGE-RFSI-SRQGDISLMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDW 138
             GE  F++ +  G ++L   LDYET  S+  TV ATD      T    V + V++VND 
Sbjct: 809 GNGEGLFAVNASTGVLTLAGALDYETGRSHEVTVSATDGGWAARTGFCAVTVDVLDVNDN 868

Query: 139 DPRFRYPQYELFLPHIPLADLTP-GSVIGKVEAADGDKG 176
            P F   +Y    P +  A+  P G+ +  + A D D G
Sbjct: 869 PPVFAGAEYT---PEV--AENAPSGTPVVTLRATDADSG 902


>gi|444721940|gb|ELW62647.1| Protocadherin Fat 4 [Tupaia chinensis]
          Length = 2300

 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 79/269 (29%), Positives = 122/269 (45%), Gaps = 42/269 (15%)

Query: 2    INEDD-----FLQPITLV---VRAIQYDNQDRYALATLIVSKAGTSLRELQ--------- 44
            +NEDD     FL P+T V    R + Y+ Q  Y L T+     G     ++         
Sbjct: 1841 VNEDDEDGIFFLNPVTGVFNLTRVLDYEAQQYYIL-TVRAEDGGGQFTTIRVYFNILDVN 1899

Query: 45   -----FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWL-SNDYGERFSISRQG 95
                 FS N YS S +ENLP+   +L        D    ++ Y + S D  E+F++ ++G
Sbjct: 1900 DNPPVFSLNSYSTSLMENLPLGSTVLVFNVTDADDGINSQLAYSIASGDSLEQFTVDQKG 1959

Query: 96   DISLMQCLDYETEDSYRFTVYATDT----LMTTSATVNISVVNVNDWDPRFRYPQYELFL 151
             + +++ LD E++  Y   V   D       T++A V+I +++VND  P F  P+    L
Sbjct: 1960 VLKVLKALDRESQSFYNLVVQVHDLPQLPAFTSTAQVSIILLDVNDNPPTFLSPK----L 2015

Query: 152  PHIPLADLTP-GSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIND-SGHISIV-DLSA 206
             +IP  + TP  +V+ K +A D D G    +   L  P    FSI    G + +  +L  
Sbjct: 2016 TYIP--ENTPIDTVVFKAQATDPDSGPNSYIEYPLLTPLGNKFSIGTIDGEVRLTGELDR 2073

Query: 207  LNTSTIQLVVVATDTGNPPRQASVPAIMH 235
               ST  L VVATD G P   +S   ++ 
Sbjct: 2074 EEVSTYSLTVVATDKGQPALSSSTEVVVR 2102



 Score = 57.8 bits (138), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 56/183 (30%), Positives = 88/183 (48%), Gaps = 16/183 (8%)

Query: 56   ENLPVNYVLLTVTTNKPR---DLRVKYWLSNDYGERFSISR-QGDISLMQCLDYETEDSY 111
            EN P++ V+       P    +  ++Y L    G +FSI    G++ L   LD E   +Y
Sbjct: 2020 ENTPIDTVVFKAQATDPDSGPNSYIEYPLLTPLGNKFSIGTIDGEVRLTGELDREEVSTY 2079

Query: 112  RFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKV 168
              TV ATD     +++S  V + V+++ND +P F    Y++ +    L     G+ I +V
Sbjct: 2080 SLTVVATDKGQPALSSSTEVVVRVLDINDNNPVFAQALYKVEINENTLT----GTDIIQV 2135

Query: 169  EAADGDKGDRVTLS---LRGPYEKMFSIND-SGHISIVD-LSALNTSTIQLVVVATDTGN 223
             AADGD+G    +    + G   + F I+  +G I++   L    T T  L V ATD G+
Sbjct: 2136 LAADGDEGTNGQVRYGIVEGNANQEFRIDSVTGTITVAKPLDREKTPTYLLTVQATDRGS 2195

Query: 224  PPR 226
             PR
Sbjct: 2196 TPR 2198



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 46/157 (29%), Positives = 82/157 (52%), Gaps = 13/157 (8%)

Query: 88   RFSI-SRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFR 143
            +F+I S  G ++L+  LDYE   +Y   + A D+    + ++ T++I +++ ND  P F 
Sbjct: 1218 QFAIDSNSGQVTLIGTLDYEATPAYSLVIQAVDSGTVSLNSTCTLSIDILDENDNTPSF- 1276

Query: 144  YPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTL--SLRGPY-EKMFSIN-DSGHI 199
             P+  LF+    L ++  G ++  V A D D GD   L  S+ G      FSI+ ++G I
Sbjct: 1277 -PKSTLFVDV--LENMRIGELVSSVTATDSDSGDNADLQYSITGTNNHGTFSISPNTGSI 1333

Query: 200  SIVDLSALNTSTI-QLVVVATDTGNPPRQASVPAIMH 235
             +       T ++ +L + A D G PPR +++  ++H
Sbjct: 1334 FLAKKLDFETQSLYKLNITAKDKGRPPRSSTMSVVIH 1370



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 34/101 (33%), Positives = 49/101 (48%), Gaps = 5/101 (4%)

Query: 77   VKYWLSNDYGERFSIS-RQGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNV 135
            V Y + +   + F I    GD+   + LD E    Y   V A D L ++   +NI+V +V
Sbjct: 1736 VTYTIISGADDSFRIDPESGDLIATKRLDRERRSKYSLLVRADDGLQSSDMRINITVSDV 1795

Query: 136  NDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG 176
            ND  P+F  P Y   +P     D TPGS++  + A D D G
Sbjct: 1796 NDHTPKFSRPVYSFDIPE----DTTPGSLVAAILATDDDSG 1832



 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 52/193 (26%), Positives = 98/193 (50%), Gaps = 12/193 (6%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRDLR--VKYWLS-NDYGERFSISR-QGDISLM 100
           FS+  YS    EN+ + Y + +V+ +   DL   + Y ++  D    F+I++  G ++  
Sbjct: 754 FSQAAYSFVVFENVALGYHVGSVSASS-MDLNSNISYLITTGDQKGMFAINQVTGQLTTA 812

Query: 101 QCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLT 160
             +D E +  Y+  V A+   +     VNI+V ++ND  P F      + +    + +  
Sbjct: 813 SVIDREEQSFYQLKVVASGGTVAGDTVVNITVKDLNDNSPHFLQAVESVNV----VENWQ 868

Query: 161 PGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIND-SGHISIVDLSALNTSTIQLVVV 217
            G  I + +A D D+G    V  SLR   + +F+IN+ +G+IS++    ++  + Q+ ++
Sbjct: 869 AGHSIFQAKAVDPDEGVNGMVLYSLRQNPKNLFAINEKNGNISLLGPLDVHVGSYQIEIL 928

Query: 218 ATDTGNPPRQASV 230
           A+D G P R +SV
Sbjct: 929 ASDMGVPQRSSSV 941



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 57/198 (28%), Positives = 88/198 (44%), Gaps = 24/198 (12%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLS-NDYGERFSISRQGDISLM 100
            F +  Y V+  E+ PVN     V     +   +  + Y ++  + G+ F I   G + + 
Sbjct: 957  FDQLSYEVTLSESEPVNSRFFQVQASDKDSGANGEISYTIAEGNTGDAFGIFPDGQLYIK 1016

Query: 101  QCLDYETEDSYRFTVYATDTLMT-TSATVNISVV--NVNDWDPRFRYPQYELFLPHIPLA 157
              LD E +D Y   V A+D  +   SATVN++V+  +VND  P F    Y  +      A
Sbjct: 1017 SELDRELQDRYVLVVVASDRAVEPLSATVNVTVILEDVNDNRPLFNSTNYTFYFEEEQRA 1076

Query: 158  DLTPGSVIGKVEAADGDKGD----RVTLSLRGPYEKMFSINDSGHIS---IVDLSAL--- 207
                GS +GKV A D D G     R +  +  P  ++ ++  SG I+     D  +L   
Sbjct: 1077 ----GSFVGKVNAIDKDFGPNGEVRYSFEMVQPDFELHAV--SGEITNTHQFDRESLMRR 1130

Query: 208  -NTSTIQLVVVATDTGNP 224
              T+     V+ATD G P
Sbjct: 1131 RGTAVFSFTVIATDQGLP 1148



 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 71/223 (31%), Positives = 101/223 (45%), Gaps = 22/223 (9%)

Query: 25  RYALATLIVSKAGTSLRELQFSKNE-YSVSALENLPVNYVLLTVTTNKPRDL----RVKY 79
           + + A L+V+    +  +  FS+ E Y+VS +EN P    LL +      DL     V++
Sbjct: 523 KVSYAQLVVTLLDVNDEKPVFSQPEGYNVSVVENSPTGTELLVLRATD-GDLGDNGTVRF 581

Query: 80  WLSNDYGERFSISRQ---GDISLMQCLDYETEDSYRFTVYATDTL---MTTSATVNISVV 133
            L     ++ S       G +S +  LD E +  Y   V ATD      ++ A +N+S++
Sbjct: 582 SLQEAEADQRSFRLDPVSGRLSTISSLDREEQAFYSLLVLATDLGSPPQSSVARINVSLL 641

Query: 134 NVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTL--SLRGPYEKMF 191
           +VND  P F   QY     HI   +   GS I  V A D D G   T+  SL       F
Sbjct: 642 DVNDNSPVFYPVQY---FAHIQ-ENEPGGSYITTVSATDPDLGPNGTVKYSLSAGDRSRF 697

Query: 192 SIN-DSGHISI-VDLSALNTSTIQLVVVATDTGN--PPRQASV 230
            +N  SG IS  + L     +  QL +VATD GN   P QA V
Sbjct: 698 QVNAQSGVISTKMALDREEKTAYQLQIVATDGGNLQSPNQAIV 740



 Score = 38.1 bits (87), Expect = 6.9,   Method: Compositional matrix adjust.
 Identities = 42/142 (29%), Positives = 70/142 (49%), Gaps = 20/142 (14%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVT-----TNKPRDLRVKYWLSNDYGERFSIS-RQGDIS 98
            F K+   V  LEN+ +  ++ +VT     +    DL+     +N++G  FSIS   G I 
Sbjct: 1276 FPKSTLFVDVLENMRIGELVSSVTATDSDSGDNADLQYSITGTNNHG-TFSISPNTGSIF 1334

Query: 99   LMQCLDYETEDSYRFTVYATDTL---MTTSATVNISVVNVNDWDPRFRYPQYELF---LP 152
            L + LD+ET+  Y+  + A D      +++ +V I V + ND  P F  P  ++F   + 
Sbjct: 1335 LAKKLDFETQSLYKLNITAKDKGRPPRSSTMSVVIHVRDFNDNPPSF--PPGDIFKSIVE 1392

Query: 153  HIPLADLTPGSVIGKVEAADGD 174
            +IP+     G+ +  V A D D
Sbjct: 1393 NIPI-----GTSVISVTAHDPD 1409


>gi|348544967|ref|XP_003459952.1| PREDICTED: protocadherin Fat 4-like [Oreochromis niloticus]
          Length = 1540

 Score = 75.5 bits (184), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 63/194 (32%), Positives = 98/194 (50%), Gaps = 14/194 (7%)

Query: 44   QFSKNEYSVSALENLP--VNYVLLTVTTNKPRDLRVKYWLSNDYGERFSISRQGDISLMQ 101
            +FSK  Y +   ENLP   + ++L VT          Y+L N+  + F I++QG +SL +
Sbjct: 824  EFSKEIYHMPVYENLPGGASILVLEVTDKDEGGFSNGYFLYNN--DTFEINKQGVVSLRR 881

Query: 102  --CLDYETEDSYRFTVYATDTL---MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
               LD ET+DSY   V A D +   ++++A +N ++++ ND  P+F      L +     
Sbjct: 882  DVALDRETKDSYLLQVVAVDQVTNGLSSTAELNFTILDYNDNSPQFPSIPDPLMIIEGNY 941

Query: 157  ADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDSGHI-SIVDLSALNTSTIQ 213
            +  +PG +   +   D D G    VTLSL  P+  +F   + G + +I  L   N  T  
Sbjct: 942  SKESPGEIF-TITPTDADLGLNGEVTLSLISPH-PLFRFREDGTLLAIGPLDRENRETYD 999

Query: 214  LVVVATDTGNPPRQ 227
            L V A D GNPPR+
Sbjct: 1000 LTVKALDKGNPPRE 1013



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 50/152 (32%), Positives = 70/152 (46%), Gaps = 14/152 (9%)

Query: 86  GERFSISRQGDISLMQCLDY-ETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRY 144
           G++F IS  G+ +    LD+ E   +Y   +  TD   + +A V I V ++ND  P F  
Sbjct: 557 GDKFKISDSGEFTTKVKLDHDEGPQNYSVEITITDGTSSDTAVVEIQVTDINDNSPVFSS 616

Query: 145 PQYELFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIND-SGHISI 201
                 +    L D   G  +  V A D D G    +  SLRG  E  FSI+  SG +S+
Sbjct: 617 SS----VTKSVLEDAEVGFNVTAVPATDKDSGFNKEIRYSLRGG-EGSFSIDPVSGMVSL 671

Query: 202 VDLSALNTST---IQLVVVATDTGNPPRQASV 230
               AL+  T     L+VVA D G P R A+ 
Sbjct: 672 A--GALDRETKAEYSLLVVAEDQGRPARSATA 701



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 56/198 (28%), Positives = 94/198 (47%), Gaps = 29/198 (14%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKP----RDLRVKYWLSNDYGERFSISRQGDISLM 100
           F K  YS    E L +N  ++ VT         + RV Y ++    E F ++  G   L 
Sbjct: 115 FEKKLYSKDVSETLNLNAEVIRVTATDADATSENNRVTYSIA-PATEDFEVTDSGAFMLK 173

Query: 101 QCLDYETEDSYRFTVYATDTL-MTTSATVNISVVNVNDWD---PRFRYPQYELFLPHIPL 156
           + L+Y    +Y FTV A D   +  +A+V   V+NV+D+D   P F +  Y+ F+    L
Sbjct: 174 RRLNYNAVQNYHFTVTAKDKEGLNDTASV---VINVDDFDNLNPYFSHSLYQAFISENQL 230

Query: 157 A---DLTPGSVIGKVEAADGDKGDRVTL--SLRG----PYEKMFSIN-DSGHISIV---D 203
                + P     +++A DGD G  +TL  ++ G     Y++ F+ +  SG +S++   D
Sbjct: 231 GLFYTIQP----EEIKAQDGDIGINMTLTYTISGVSPDKYQRNFNTDPSSGVLSVIAAFD 286

Query: 204 LSALNTSTIQLVVVATDT 221
              +N+S I + + A  T
Sbjct: 287 REEMNSSMISITIKAAQT 304



 Score = 40.8 bits (94), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 34/112 (30%), Positives = 54/112 (48%), Gaps = 8/112 (7%)

Query: 45  FSKNEYSVSALENLPVNYVLLTV-TTNKPRDL--RVKYWLSNDYGERFSISR-QGDISLM 100
           FS +  + S LE+  V + +  V  T+K       ++Y L    G  FSI    G +SL 
Sbjct: 614 FSSSSVTKSVLEDAEVGFNVTAVPATDKDSGFNKEIRYSLRGGEG-SFSIDPVSGMVSLA 672

Query: 101 QCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYEL 149
             LD ET+  Y   V A D      + +AT+ + V ++ND  P+F   +Y++
Sbjct: 673 GALDRETKAEYSLLVVAEDQGRPARSATATLTVQVSDINDNTPKFSVAEYQV 724



 Score = 39.7 bits (91), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 72/253 (28%), Positives = 112/253 (44%), Gaps = 28/253 (11%)

Query: 6    DFLQPITLVVRAIQYDNQDR--YALATLIVSKAGTSLRE-LQFSKNEYSVSALENLPVNY 62
            D  +  TLV+ A+  D+        A ++V+   +SL E + F    Y+ S  EN     
Sbjct: 1097 DLTEDTTLVLTAVATDHGQSPLSTTARVVVNLKISSLTENVAFLSFSYNFSLPENQEAGV 1156

Query: 63   VLLTVTTNKPRDL-RVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDTL 121
            ++  VT +   +L  V Y L N + + FSI+  G I     LD E ++ Y   V   DT 
Sbjct: 1157 LVGKVTASSGSNLYNVTYSL-NTHEDLFSINLSGAIFTKAQLDKEQQEWYFLEVEVVDTR 1215

Query: 122  ---MTTSATVNISVVNVNDWDPRFRYPQYELFLPHI-PLADLTPGSVIGKVEAADGDKGD 177
                +   TV + V +VN+  P F    Y   +  I P    TP   + +V+A+D D GD
Sbjct: 1216 NPPTSAMTTVRVQVEDVNE-SPHFPPEVYSASVFSIAPYK--TP---VIQVKASDPDVGD 1269

Query: 178  ----RVTLSLRGPYEKMFSINDSGHISIVDLSALNTSTIQLVVVATDTGNPPRQASVPAI 233
                  +L+   PY  M     SG + ++  + L   T ++ V ATD    P      AI
Sbjct: 1270 VGQLVYSLTAESPYFDMDP--SSGLLYVISATELAGQTAKMEVKATD----PHDLHATAI 1323

Query: 234  MHFPEAIVQQASS 246
            +   E +VQ ++S
Sbjct: 1324 V---EVMVQASAS 1333



 Score = 38.9 bits (89), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 69/232 (29%), Positives = 94/232 (40%), Gaps = 37/232 (15%)

Query: 12  TLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNK 71
           +L+V A       R A ATL V  +  +    +FS  EY V  LE   V   LLT++   
Sbjct: 684 SLLVVAEDQGRPARSATATLTVQVSDINDNTPKFSVAEYQVEILETESVGASLLTLSALD 743

Query: 72  PRDLRVKYWLSNDYGERFSISRQ---------------GDISLMQCLDYETEDSYRFTVY 116
           P D  V   ++      +SI +Q               G + L+Q LDY   + Y   V 
Sbjct: 744 P-DESVNGIVT------YSIFQQSPSTDPAVFDLELSTGILRLVQPLDYSEVNMYTLKVQ 796

Query: 117 ATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSV-IGKVEAADGDK 175
           ATD   T S   N SVV V   D     P++   + H+P+ +  PG   I  +E  D D+
Sbjct: 797 ATDG-GTPSLVGNGSVV-VKIKDENNNPPEFSKEIYHMPVYENLPGGASILVLEVTDKDE 854

Query: 176 GDRVTLSLRGPY----EKMFSINDSGHISIVDLSALNTSTIQ---LVVVATD 220
           G          Y       F IN  G +S+    AL+  T     L VVA D
Sbjct: 855 G-----GFSNGYFLYNNDTFEINKQGVVSLRRDVALDRETKDSYLLQVVAVD 901


>gi|354495052|ref|XP_003509646.1| PREDICTED: protocadherin Fat 4 [Cricetulus griseus]
          Length = 4981

 Score = 75.5 bits (184), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 78/269 (28%), Positives = 122/269 (45%), Gaps = 42/269 (15%)

Query: 2    INEDD-----FLQPITLV---VRAIQYDNQDRYALATLIVSKAG--TSLREL-------- 43
            ++EDD     FL P+T V    RA+ Y+ Q  Y L        G  T++R          
Sbjct: 1880 VDEDDGDGVFFLNPVTGVFNLTRALDYETQQYYILTVRAEDGGGQFTTVRAYFNILDVND 1939

Query: 44   ---QFSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWL-SNDYGERFSISRQGD 96
                FS + YS S +ENLPV   +L        D    ++ Y + S D   +F++ + G 
Sbjct: 1940 NPPVFSMSSYSTSLMENLPVGSTVLVFNVTDADDGVNSQLSYSIASGDSLGQFAVDKHGV 1999

Query: 97   ISLMQCLDYETEDSYRFTVYATDT------LMTTSATVNISVVNVNDWDPRFRYPQYELF 150
            +  ++ LD E++  Y   +   D+        T++A V+I +++VND  P F  P+    
Sbjct: 2000 LKTLKALDRESQSFYNLVIQVHDSPQPPASRFTSTAQVSIILLDVNDNPPMFLSPK---- 2055

Query: 151  LPHIPLADLTP-GSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIND-SGHISIV-DLS 205
            L +IP  + TP  +V+ K +A D D G    +  +L  P    FSI    G + +  +L 
Sbjct: 2056 LTYIP--ENTPIDTVVFKAQATDPDSGPNSYIEYTLLNPLGNKFSIGTIDGEVHLTGELD 2113

Query: 206  ALNTSTIQLVVVATDTGNPPRQASVPAIM 234
                S   L VVATD G PP  +S   ++
Sbjct: 2114 REEVSNYSLTVVATDKGQPPLSSSTEVVV 2142



 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 60/192 (31%), Positives = 91/192 (47%), Gaps = 24/192 (12%)

Query: 50   YSVSALENLPVNYVLLTVTTNKPRDLRV----KYWLSNDYGERFSIS-RQGDISLMQCLD 104
            +S    EN P+ Y +  VTT+   D+ +    +Y ++ D    F+I+   GDI + + L+
Sbjct: 2779 FSAYVSENSPLGYTVTRVTTSD-EDIGINAISRYSIA-DTSLPFTINPNTGDIVISRPLN 2836

Query: 105  YETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSV 164
             E  D YR  V A D+  T S  V I V ++ND  PRF  P Y L  P +       GS 
Sbjct: 2837 REDTDRYRIRVSAHDSGWTVSTDVTIFVTDINDNTPRFSRPSYYLDCPELTEV----GSK 2892

Query: 165  IGKVEAADGDKGD--RVTLSLRGPYEKMFSIN-DSGHI---------SIVDLSALNTSTI 212
            + +V A D D+G   +V   ++   E  F IN  +G I         ++   S +N +  
Sbjct: 2893 VTQVSATDPDEGSNGQVFYFIKSQSE-YFRINATTGEIFNKQVLKYQNVSGASNVNINRH 2951

Query: 213  QLVVVATDTGNP 224
              +V A+D GNP
Sbjct: 2952 SFIVTASDRGNP 2963



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 34/101 (33%), Positives = 49/101 (48%), Gaps = 5/101 (4%)

Query: 77   VKYWLSNDYGERFSIS-RQGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNV 135
            V Y L +   + F I    GD+   + LD E    Y   V A D L ++   +NI++ +V
Sbjct: 1775 VTYALISGADDSFRIDPESGDLIATRRLDREHRSKYSLLVRADDGLQSSDMRINITISDV 1834

Query: 136  NDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG 176
            ND  P+F  P Y   +P     D TPGS++  + A D D G
Sbjct: 1835 NDHTPKFSRPVYSFDIPE----DTTPGSLVAAILATDDDSG 1871



 Score = 54.7 bits (130), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 50/192 (26%), Positives = 96/192 (50%), Gaps = 10/192 (5%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVT-TNKPRDLRVKYWLS-NDYGERFSISR-QGDISLMQ 101
           FS+  YS    EN+ + Y + +V+ T    +  + Y ++  D    F+++   G ++   
Sbjct: 793 FSQAAYSFVVFENVALGYHVGSVSATTMDLNANISYLITTGDQRGMFAMNPVTGQLTTAS 852

Query: 102 CLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTP 161
            +D E +  Y+  V A+   +T    VNI+V ++ND  P F      +      + +   
Sbjct: 853 VIDREEQSFYQLRVVASGGAVTGDTLVNITVKDLNDNAPHFLQAVESINA----VENWQA 908

Query: 162 GSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIND-SGHISIVDLSALNTSTIQLVVVA 218
           G  I + +A D D+G   RV  SL+   + +F+IN+ +G+IS++    ++  + QL ++A
Sbjct: 909 GHSIYQAKAMDPDEGVNGRVLYSLKQNPKNLFAINEQNGNISLLGALDVHAGSYQLEILA 968

Query: 219 TDTGNPPRQASV 230
           +D G P   +S+
Sbjct: 969 SDMGVPQLSSSI 980



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 56/190 (29%), Positives = 94/190 (49%), Gaps = 15/190 (7%)

Query: 56   ENLPVNYVLLTVTTNKPRDLRVKYWL-SNDYGERFSISR-QGDISLMQCLDYETEDSYRF 113
            EN PV  ++ T+T +  R   + Y++ S + G  F I    G +S+ + LD+E    Y  
Sbjct: 2580 ENQPVGTLVTTITGSSLRGETLSYYIASGNLGNTFQIDPLTGQVSISKPLDFEQVQKYVV 2639

Query: 114  TVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEA 170
             + A D      ++   ++I+V+++ND  P F   + + F+  I L +L+P  ++  V A
Sbjct: 2640 WIEARDGGFPPFSSYEKLDITVLDINDNAPAF---EKDPFVSEI-LENLSPRKIL-TVSA 2694

Query: 171  ADGDKGDRVTLS---LRGPYEKMFSINDS-GHI-SIVDLSALNTSTIQLVVVATDTGNPP 225
             D D G    L    + G  E  F+IN + G I SI  L     S  +L V ++D G+P 
Sbjct: 2695 TDKDSGPNGQLDYEIVNGNKENSFTINHATGEIRSIRPLDREKMSHYELTVKSSDKGSPS 2754

Query: 226  RQASVPAIMH 235
            +  SV  I++
Sbjct: 2755 QSTSVRVIIN 2764



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 73/243 (30%), Positives = 105/243 (43%), Gaps = 34/243 (13%)

Query: 11  ITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNE-YSVSALENLPVNYVLLTVTT 69
           I L + A       + + A L+V+    +  +  FS+ E Y+VS +EN P    LL +  
Sbjct: 548 IVLNISARDQGVHPKVSYAQLVVTVLDVNDEKPVFSQPEGYTVSVVENAPAGTELLVLGA 607

Query: 70  NKPRDLRVKYWLSNDYGERFSISR-------------QGDISLMQCLDYETEDSYRFTVY 116
                      LS++   RFS+                G +S +  LD E +  Y   V 
Sbjct: 608 TDGD-------LSDNGTVRFSLQEAESDQRLFRLDPVSGRLSTISSLDREEQAFYCLLVL 660

Query: 117 ATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADG 173
           ATD      +++A VN+S++++ND  P F   QY     HI   +   GS +  V A D 
Sbjct: 661 ATDLGSPPQSSTAQVNVSLLDINDNSPVFYPVQY---FAHI-QENEPGGSYVTTVSATDP 716

Query: 174 DKGDRVTL--SLRGPYEKMFSIN-DSGHISI-VDLSALNTSTIQLVVVATDTGN--PPRQ 227
           D G   T+  S+       F IN  SG IS  + L     +  QL +VATD GN   P Q
Sbjct: 717 DMGPNGTVQYSISAGDRSRFQINAKSGVISTRMALDREEKTAYQLQIVATDGGNLQSPNQ 776

Query: 228 ASV 230
           A V
Sbjct: 777 AIV 779



 Score = 52.0 bits (123), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 45/164 (27%), Positives = 83/164 (50%), Gaps = 13/164 (7%)

Query: 81   LSNDYGERFSISR-QGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVN 136
            L  +   +F+I R  G ++L+  LDYE   +Y   + A D+    + ++ T++I +++ N
Sbjct: 1250 LKGNEERQFAIDRFSGQVTLIGKLDYEATPAYSLLIQAVDSGAISLNSTCTLSIDILDEN 1309

Query: 137  DWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTL--SLRGPY-EKMFSI 193
            D  P F  P+  LF+    L ++  G ++  V A D D G    L  ++ G      FSI
Sbjct: 1310 DNTPSF--PKSTLFVDV--LENMRIGELVSSVTATDSDSGVNADLHYTITGSNNHGTFSI 1365

Query: 194  N-DSGHISIVDLSALNTSTI-QLVVVATDTGNPPRQASVPAIMH 235
            + ++G I +       T ++ +L + A D G PPR +++  ++H
Sbjct: 1366 SPNTGSIFLAKKLDFETQSLYKLNITAKDQGRPPRSSTMSVVIH 1409



 Score = 42.4 bits (98), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 55/192 (28%), Positives = 86/192 (44%), Gaps = 18/192 (9%)

Query: 51   SVSALENLPVNYVLLTVTTNKPRDL---RVKYWLSNDYGERFSISRQ-GDISLMQCLDYE 106
            S++A+EN    + +       P +    RV Y L  +    F+I+ Q G+ISL+  LD  
Sbjct: 899  SINAVENWQAGHSIYQAKAMDPDEGVNGRVLYSLKQNPKNLFAINEQNGNISLLGALDVH 958

Query: 107  TEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTP-G 162
               SY+  + A+D     +++S  + I V +VND  P F    YE     + L++  P  
Sbjct: 959  A-GSYQLEILASDMGVPQLSSSIILTIYVHDVNDNPPVFDQISYE-----VTLSESEPVN 1012

Query: 163  SVIGKVEAADGDKGDRVTLSLR---GPYEKMFSINDSGHISI-VDLSALNTSTIQLVVVA 218
            S   KV+A+D D G    ++     G     F I   G + I  +L         L+VVA
Sbjct: 1013 SRFFKVQASDKDSGANGEIAYTITDGNTGDAFGIFPDGQLYIKSELDRELQERYVLLVVA 1072

Query: 219  TDTGNPPRQASV 230
            +D    P  A+V
Sbjct: 1073 SDRAVEPLSATV 1084



 Score = 42.0 bits (97), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 48/180 (26%), Positives = 85/180 (47%), Gaps = 14/180 (7%)

Query: 6    DFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLL 65
            D  Q   + V A    N    + AT+ ++    +    +FS++  S +  E+  V  V+ 
Sbjct: 3052 DLNQNFFITVTAKDKGNPPLSSQATVHITVTEENYHTPEFSQSHISATIPESHSVGAVVR 3111

Query: 66   TVTTNKPRDLR----VKYWLSNDYGER-FSI-SRQGDISLMQCLDYETEDSYRFTVYATD 119
             V+  + RD      ++Y +S+   E  F+I S  G ++L + LDYE    +  T+ ATD
Sbjct: 3112 AVSA-RDRDTAMNGLIRYDISSGNEEGIFAINSSTGVLTLAKALDYELCSKHEMTISATD 3170

Query: 120  ---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG 176
                  T S ++ ++V++VND  P F  P  + F P + + +   G+ +  + A D D G
Sbjct: 3171 GGWVARTGSCSLTVNVIDVNDNSPVF-VP--DEFFPTV-MENAPSGTTVIHLNATDADSG 3226



 Score = 41.6 bits (96), Expect = 0.62,   Method: Compositional matrix adjust.
 Identities = 37/140 (26%), Positives = 66/140 (47%), Gaps = 13/140 (9%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGERFSIS-RQGDISLM 100
            F  +E+  + +EN P    ++ +     +   +  + Y + +   + F I    G I+  
Sbjct: 3196 FVPDEFFPTVMENAPSGTTVIHLNATDADSGTNAVIAYTVQSSDSDLFVIDPNTGVITTQ 3255

Query: 101  QCLDYETEDSYRFTVYA---TDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLA 157
              LD+ET+ SY  TV A    D    + ATV+I +   N++ PRF    Y     +  ++
Sbjct: 3256 GFLDFETKQSYHLTVKAFNVPDEEKCSFATVDIQLKGTNEYVPRFVSKLY-----YFEVS 3310

Query: 158  DLTP-GSVIGKVEAADGDKG 176
            +  P G+ +G+V A+D D G
Sbjct: 3311 EAAPRGTAVGEVFASDRDMG 3330



 Score = 39.7 bits (91), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 67/260 (25%), Positives = 112/260 (43%), Gaps = 41/260 (15%)

Query: 12   TLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPV--NYVLLTVTT 69
            TL V+A    +  R  + T+ ++    +     F  + YSV+  ENL      +L  V  
Sbjct: 2226 TLTVQATDRGSSPRTDVCTVTITLLDMNDFVPVFELSPYSVNVPENLGTLPRTILQVVAR 2285

Query: 70   NKPR--DLRVKY-WLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDT---LMT 123
            +  +  + R+ Y  L  +    F+++  G++ ++Q LD E  D++   V A D     +T
Sbjct: 2286 DDDQGPNSRLSYVLLGGNEDNAFALTASGELRVIQSLDREARDNFVLVVTAADAGSPALT 2345

Query: 124  TSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDR--VTL 181
             + T+N+ V ++ND  P F    +   +P     D   G+ +  V A+D D      ++ 
Sbjct: 2346 GTGTINVLVDDINDNVPTFASNMHFTAIPE----DAPTGTDVLLVNASDADAAANAVISY 2401

Query: 182  SLRGPYEKMFSINDS-GHI---SIVDLSALNTSTIQLVVVATDTG--------------- 222
            S+ G     F+IN S G I   +++D    +  T  LVVVA+D G               
Sbjct: 2402 SIIGG-NSQFTINPSTGQIITSALLDRETKDNYT--LVVVASDAGSPESLSSSTSVLVSV 2458

Query: 223  -----NPPRQASVPAIMHFP 237
                 NPPR    P + H P
Sbjct: 2459 TDVNDNPPRFQHHPYVTHIP 2478



 Score = 39.7 bits (91), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 48/149 (32%), Positives = 70/149 (46%), Gaps = 12/149 (8%)

Query: 95   GDISLMQCLDYETEDSYRFTVYATDT----LMTTSATVNISVVNVNDWDPRFRYPQYELF 150
            G I     LD ET+D+Y   V A+D      +++S +V +SV +VND  PRF   Q+  +
Sbjct: 2417 GQIITSALLDRETKDNYTLVVVASDAGSPESLSSSTSVLVSVTDVNDNPPRF---QHHPY 2473

Query: 151  LPHIPLADLTPGSVIGKVEAADGDKGDRVTL--SLRGPYEKMFSINDSGHISIVDLSALN 208
            + HIP   L PGS +  V   D D G    L  SL G   + F I D    +I+    L+
Sbjct: 2474 VTHIPSPTL-PGSFVFAVTVTDEDIGSNSELHYSLSGRNSEKFHI-DPLRGAIMATGPLS 2531

Query: 209  -TSTIQLVVVATDTGNPPRQASVPAIMHF 236
              S +   V   D G+ P+  +    + F
Sbjct: 2532 GASEVTFSVHVKDGGSFPKTDATTVTVRF 2560



 Score = 39.7 bits (91), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 37/135 (27%), Positives = 64/135 (47%), Gaps = 8/135 (5%)

Query: 89   FSISRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYP 145
            FS++  G +S  + +D E    +  +V   D+    M+++ TV+I+V++ ND   + R  
Sbjct: 3560 FSLNTAGVLSTTREIDREQIADFYLSVVTRDSGAPQMSSTGTVHITVLDQNDNPSQSR-- 3617

Query: 146  QYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSGHISIVDLS 205
              E+F+ +    +L PG  +G V+  D D  D    SL      +FSI  +G   +    
Sbjct: 3618 TVEIFVNY--YGNLFPGGTLGSVKPQDPDVLDSFHCSLTSGVTSLFSI-PAGSCDLSSQP 3674

Query: 206  ALNTSTIQLVVVATD 220
                 T  L VV++D
Sbjct: 3675 RSTDGTFDLTVVSSD 3689



 Score = 39.3 bits (90), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 77/167 (46%), Gaps = 24/167 (14%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKP-----RDLRVKYWLSNDYGERFSIS-RQGDIS 98
            F K+   V  LEN+ +  ++ +VT          DL      SN++G  FSIS   G I 
Sbjct: 1315 FPKSTLFVDVLENMRIGELVSSVTATDSDSGVNADLHYTITGSNNHGT-FSISPNTGSIF 1373

Query: 99   LMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELF---LP 152
            L + LD+ET+  Y+  + A D      +++ +V I V + ND  P F  P  ++F   + 
Sbjct: 1374 LAKKLDFETQSLYKLNITAKDQGRPPRSSTMSVVIHVRDFNDNPPSF--PPGDIFKSIME 1431

Query: 153  HIPLADLTPGSVIGKVEAADGDKGDRVTLSL----RGPYEKMFSIND 195
            ++PL     G+ +  V A D D      LS     + P    FSI++
Sbjct: 1432 NVPL-----GTSVISVTAHDPDADINGQLSYAIIQQMPRGNHFSIDE 1473



 Score = 38.9 bits (89), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 56/208 (26%), Positives = 91/208 (43%), Gaps = 23/208 (11%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGERFSISRQ-GDISLM 100
           F  + Y     E+  V   +L V     ++  +  ++Y L  D G  F +  + G I++ 
Sbjct: 250 FGSSHYQAGVPEDAVVGSSVLQVAAADADEGTNADIRYRL-QDEGTPFQMDPETGLITVR 308

Query: 101 QCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDP--RFRY-PQYELFLPHI 154
           + LD+E    Y  TV ATD     +T  A   I +++VND DP  +FRY P    +    
Sbjct: 309 EPLDFEARRQYSLTVQATDRGVPSLTGRAEAIIQLLDVNDNDPVVKFRYFPATSRYASVD 368

Query: 155 PLADLTPGSVIGKVEAADGD----KGDRVTLSLRGPYEKMFSINDSG--HISIVDL-SAL 207
             A +  G+V+  +   D D     G+     L G  ++ F +  S   ++S++ + SAL
Sbjct: 369 ENAQV--GTVVALLTVTDADSPAANGNISVQILGGNEQRHFEVQRSKVPNLSLIKVASAL 426

Query: 208 NTSTI---QLVVVATDTGNPPRQASVPA 232
           +   I    L V  +D    P  A V A
Sbjct: 427 DRERIPSYNLTVSVSDNSGAPPTAEVQA 454


>gi|195159447|ref|XP_002020590.1| GL15355 [Drosophila persimilis]
 gi|194117540|gb|EDW39583.1| GL15355 [Drosophila persimilis]
          Length = 1691

 Score = 75.5 bits (184), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 68/200 (34%), Positives = 107/200 (53%), Gaps = 20/200 (10%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTTNKPR---DLRVKYWLSNDYGERFSI-SRQGDISL 99
           +F   +Y  S  E+ P+   ++ +         + R+ Y L+N+   +F+I S+ G I+ 
Sbjct: 78  RFDLPKYVASVAEDAPLGASVVRIKATDADLGVNARLVYSLANETQWQFAIDSKSGLITT 137

Query: 100 MQCLDYETEDSYRFTVYATD----TLMTTSATVNISVVNVNDWDPRF-RYPQYELFLPHI 154
           +  LD E + SY F V ATD     + +    V I+V++VND  P F RYP    ++  +
Sbjct: 138 VGKLDRELQSSYSFMVLATDGGRYEVRSARVAVQINVLDVNDNRPVFERYP----YIGQV 193

Query: 155 PLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIN-DSGHISIVD-LSALNTS 210
           P A + PG  + KV+A D D+G    +  SL+G   K F IN ++G +S    L++ +  
Sbjct: 194 P-ALIQPGQTLLKVQAHDADQGLNGELLYSLKGDAGK-FRINPNTGALSATQSLASESGR 251

Query: 211 TIQLVVVATDTGNPPRQASV 230
            +QL VVA D GNPP Q+SV
Sbjct: 252 LLQLEVVARDKGNPP-QSSV 270



 Score = 45.4 bits (106), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 48/146 (32%), Positives = 72/146 (49%), Gaps = 14/146 (9%)

Query: 86  GERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDTLMTTS--ATVNISVV--NVNDWDP 140
           G +FSI +R G++S  + LD E    Y   V A+D    TS     NI+V+  + ND  P
Sbjct: 19  GNKFSIDARSGELSC-RPLDREQHARYTLQVQASDRGQPTSRQGHCNITVLVEDQNDNAP 77

Query: 141 RFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIND-SG 197
           RF  P+Y   +      D   G+ + +++A D D G   R+  SL    +  F+I+  SG
Sbjct: 78  RFDLPKYVASVAE----DAPLGASVVRIKATDADLGVNARLVYSLANETQWQFAIDSKSG 133

Query: 198 HISIV-DLSALNTSTIQLVVVATDTG 222
            I+ V  L     S+   +V+ATD G
Sbjct: 134 LITTVGKLDRELQSSYSFMVLATDGG 159



 Score = 40.8 bits (94), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 47/108 (43%), Gaps = 6/108 (5%)

Query: 92   SRQGDISLMQCLDYETEDSYRFTVYATDTLMTTS-ATVNISVVNVNDWDPRFRYPQYELF 150
            S  G +S     D+E    Y   + A+D     +   V + V + +++ P+F    Y   
Sbjct: 1027 SHSGMVSSAAVFDFEQRQRYDMELRASDMGGKGARVAVRVEVDSRDEFAPQFSERTYRFV 1086

Query: 151  LPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDS 196
            LP    A L  G V+G+V A D D G   RV   L  P+   F +N S
Sbjct: 1087 LPAA--AALPQGFVVGQVTATDADSGPDGRVVYQLSAPHTH-FKVNRS 1131



 Score = 37.7 bits (86), Expect = 8.8,   Method: Compositional matrix adjust.
 Identities = 38/128 (29%), Positives = 60/128 (46%), Gaps = 10/128 (7%)

Query: 89  FSISR-QGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRF---RY 144
           F++ R  G + L + LDYE +  Y+  V A+D       T+ + V + ND  P F   + 
Sbjct: 587 FALDRYSGKLVLKRRLDYELQQEYQLEVIASDAAHEARTTLTVRVNDENDNAPVFLAQQP 646

Query: 145 PQYELFLPHIP-LAD-LTPGSVIGKVEAADGD---KGDRVTLSLRGPYEKMFSINDSGHI 199
           P Y   LP +  +AD L+    +  V A D D      ++  S+  P E  FS+  S  +
Sbjct: 647 PAYFAILPAVAEVADSLSMDLELLSVNATDADAEGSNSKIRYSIDPPVEG-FSVGASSGV 705

Query: 200 SIVDLSAL 207
             V++S L
Sbjct: 706 VSVNMSRL 713


>gi|344257115|gb|EGW13219.1| Protocadherin Fat 4 [Cricetulus griseus]
          Length = 5152

 Score = 75.1 bits (183), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 78/269 (28%), Positives = 122/269 (45%), Gaps = 42/269 (15%)

Query: 2    INEDD-----FLQPITLV---VRAIQYDNQDRYALATLIVSKAG--TSLREL-------- 43
            ++EDD     FL P+T V    RA+ Y+ Q  Y L        G  T++R          
Sbjct: 2051 VDEDDGDGVFFLNPVTGVFNLTRALDYETQQYYILTVRAEDGGGQFTTVRAYFNILDVND 2110

Query: 44   ---QFSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWL-SNDYGERFSISRQGD 96
                FS + YS S +ENLPV   +L        D    ++ Y + S D   +F++ + G 
Sbjct: 2111 NPPVFSMSSYSTSLMENLPVGSTVLVFNVTDADDGVNSQLSYSIASGDSLGQFAVDKHGV 2170

Query: 97   ISLMQCLDYETEDSYRFTVYATDT------LMTTSATVNISVVNVNDWDPRFRYPQYELF 150
            +  ++ LD E++  Y   +   D+        T++A V+I +++VND  P F  P+    
Sbjct: 2171 LKTLKALDRESQSFYNLVIQVHDSPQPPASRFTSTAQVSIILLDVNDNPPMFLSPK---- 2226

Query: 151  LPHIPLADLTP-GSVIGKVEAADGDKGDR--VTLSLRGPYEKMFSIND-SGHISIV-DLS 205
            L +IP  + TP  +V+ K +A D D G    +  +L  P    FSI    G + +  +L 
Sbjct: 2227 LTYIP--ENTPIDTVVFKAQATDPDSGPNSYIEYTLLNPLGNKFSIGTIDGEVHLTGELD 2284

Query: 206  ALNTSTIQLVVVATDTGNPPRQASVPAIM 234
                S   L VVATD G PP  +S   ++
Sbjct: 2285 REEVSNYSLTVVATDKGQPPLSSSTEVVV 2313



 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 60/192 (31%), Positives = 91/192 (47%), Gaps = 24/192 (12%)

Query: 50   YSVSALENLPVNYVLLTVTTNKPRDLRV----KYWLSNDYGERFSIS-RQGDISLMQCLD 104
            +S    EN P+ Y +  VTT+   D+ +    +Y ++ D    F+I+   GDI + + L+
Sbjct: 2950 FSAYVSENSPLGYTVTRVTTSD-EDIGINAISRYSIA-DTSLPFTINPNTGDIVISRPLN 3007

Query: 105  YETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSV 164
             E  D YR  V A D+  T S  V I V ++ND  PRF  P Y L  P +       GS 
Sbjct: 3008 REDTDRYRIRVSAHDSGWTVSTDVTIFVTDINDNTPRFSRPSYYLDCPELTEV----GSK 3063

Query: 165  IGKVEAADGDKGD--RVTLSLRGPYEKMFSIN-DSGHI---------SIVDLSALNTSTI 212
            + +V A D D+G   +V   ++   E  F IN  +G I         ++   S +N +  
Sbjct: 3064 VTQVSATDPDEGSNGQVFYFIKSQSE-YFRINATTGEIFNKQVLKYQNVSGASNVNINRH 3122

Query: 213  QLVVVATDTGNP 224
              +V A+D GNP
Sbjct: 3123 SFIVTASDRGNP 3134



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 34/101 (33%), Positives = 49/101 (48%), Gaps = 5/101 (4%)

Query: 77   VKYWLSNDYGERFSIS-RQGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNV 135
            V Y L +   + F I    GD+   + LD E    Y   V A D L ++   +NI++ +V
Sbjct: 1946 VTYALISGADDSFRIDPESGDLIATRRLDREHRSKYSLLVRADDGLQSSDMRINITISDV 2005

Query: 136  NDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG 176
            ND  P+F  P Y   +P     D TPGS++  + A D D G
Sbjct: 2006 NDHTPKFSRPVYSFDIPE----DTTPGSLVAAILATDDDSG 2042



 Score = 54.7 bits (130), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 50/192 (26%), Positives = 96/192 (50%), Gaps = 10/192 (5%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVT-TNKPRDLRVKYWLS-NDYGERFSISR-QGDISLMQ 101
            FS+  YS    EN+ + Y + +V+ T    +  + Y ++  D    F+++   G ++   
Sbjct: 964  FSQAAYSFVVFENVALGYHVGSVSATTMDLNANISYLITTGDQRGMFAMNPVTGQLTTAS 1023

Query: 102  CLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTP 161
             +D E +  Y+  V A+   +T    VNI+V ++ND  P F      +      + +   
Sbjct: 1024 VIDREEQSFYQLRVVASGGAVTGDTLVNITVKDLNDNAPHFLQAVESINA----VENWQA 1079

Query: 162  GSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIND-SGHISIVDLSALNTSTIQLVVVA 218
            G  I + +A D D+G   RV  SL+   + +F+IN+ +G+IS++    ++  + QL ++A
Sbjct: 1080 GHSIYQAKAMDPDEGVNGRVLYSLKQNPKNLFAINEQNGNISLLGALDVHAGSYQLEILA 1139

Query: 219  TDTGNPPRQASV 230
            +D G P   +S+
Sbjct: 1140 SDMGVPQLSSSI 1151



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 56/190 (29%), Positives = 94/190 (49%), Gaps = 15/190 (7%)

Query: 56   ENLPVNYVLLTVTTNKPRDLRVKYWL-SNDYGERFSISR-QGDISLMQCLDYETEDSYRF 113
            EN PV  ++ T+T +  R   + Y++ S + G  F I    G +S+ + LD+E    Y  
Sbjct: 2751 ENQPVGTLVTTITGSSLRGETLSYYIASGNLGNTFQIDPLTGQVSISKPLDFEQVQKYVV 2810

Query: 114  TVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEA 170
             + A D      ++   ++I+V+++ND  P F   + + F+  I L +L+P  ++  V A
Sbjct: 2811 WIEARDGGFPPFSSYEKLDITVLDINDNAPAF---EKDPFVSEI-LENLSPRKIL-TVSA 2865

Query: 171  ADGDKGDRVTLS---LRGPYEKMFSINDS-GHI-SIVDLSALNTSTIQLVVVATDTGNPP 225
             D D G    L    + G  E  F+IN + G I SI  L     S  +L V ++D G+P 
Sbjct: 2866 TDKDSGPNGQLDYEIVNGNKENSFTINHATGEIRSIRPLDREKMSHYELTVKSSDKGSPS 2925

Query: 226  RQASVPAIMH 235
            +  SV  I++
Sbjct: 2926 QSTSVRVIIN 2935



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 73/243 (30%), Positives = 105/243 (43%), Gaps = 34/243 (13%)

Query: 11  ITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNE-YSVSALENLPVNYVLLTVTT 69
           I L + A       + + A L+V+    +  +  FS+ E Y+VS +EN P    LL +  
Sbjct: 719 IVLNISARDQGVHPKVSYAQLVVTVLDVNDEKPVFSQPEGYTVSVVENAPAGTELLVLGA 778

Query: 70  NKPRDLRVKYWLSNDYGERFSISR-------------QGDISLMQCLDYETEDSYRFTVY 116
                      LS++   RFS+                G +S +  LD E +  Y   V 
Sbjct: 779 TDGD-------LSDNGTVRFSLQEAESDQRLFRLDPVSGRLSTISSLDREEQAFYCLLVL 831

Query: 117 ATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADG 173
           ATD      +++A VN+S++++ND  P F   QY     HI   +   GS +  V A D 
Sbjct: 832 ATDLGSPPQSSTAQVNVSLLDINDNSPVFYPVQY---FAHI-QENEPGGSYVTTVSATDP 887

Query: 174 DKGDRVTL--SLRGPYEKMFSIN-DSGHISI-VDLSALNTSTIQLVVVATDTGN--PPRQ 227
           D G   T+  S+       F IN  SG IS  + L     +  QL +VATD GN   P Q
Sbjct: 888 DMGPNGTVQYSISAGDRSRFQINAKSGVISTRMALDREEKTAYQLQIVATDGGNLQSPNQ 947

Query: 228 ASV 230
           A V
Sbjct: 948 AIV 950



 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 45/164 (27%), Positives = 83/164 (50%), Gaps = 13/164 (7%)

Query: 81   LSNDYGERFSISR-QGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVN 136
            L  +   +F+I R  G ++L+  LDYE   +Y   + A D+    + ++ T++I +++ N
Sbjct: 1421 LKGNEERQFAIDRFSGQVTLIGKLDYEATPAYSLLIQAVDSGAISLNSTCTLSIDILDEN 1480

Query: 137  DWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTL--SLRGPY-EKMFSI 193
            D  P F  P+  LF+    L ++  G ++  V A D D G    L  ++ G      FSI
Sbjct: 1481 DNTPSF--PKSTLFVDV--LENMRIGELVSSVTATDSDSGVNADLHYTITGSNNHGTFSI 1536

Query: 194  N-DSGHISIVDLSALNTSTI-QLVVVATDTGNPPRQASVPAIMH 235
            + ++G I +       T ++ +L + A D G PPR +++  ++H
Sbjct: 1537 SPNTGSIFLAKKLDFETQSLYKLNITAKDQGRPPRSSTMSVVIH 1580



 Score = 42.4 bits (98), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 55/192 (28%), Positives = 86/192 (44%), Gaps = 18/192 (9%)

Query: 51   SVSALENLPVNYVLLTVTTNKPRDL---RVKYWLSNDYGERFSISRQ-GDISLMQCLDYE 106
            S++A+EN    + +       P +    RV Y L  +    F+I+ Q G+ISL+  LD  
Sbjct: 1070 SINAVENWQAGHSIYQAKAMDPDEGVNGRVLYSLKQNPKNLFAINEQNGNISLLGALDVH 1129

Query: 107  TEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTP-G 162
               SY+  + A+D     +++S  + I V +VND  P F    YE     + L++  P  
Sbjct: 1130 A-GSYQLEILASDMGVPQLSSSIILTIYVHDVNDNPPVFDQISYE-----VTLSESEPVN 1183

Query: 163  SVIGKVEAADGDKGDRVTLSLR---GPYEKMFSINDSGHISI-VDLSALNTSTIQLVVVA 218
            S   KV+A+D D G    ++     G     F I   G + I  +L         L+VVA
Sbjct: 1184 SRFFKVQASDKDSGANGEIAYTITDGNTGDAFGIFPDGQLYIKSELDRELQERYVLLVVA 1243

Query: 219  TDTGNPPRQASV 230
            +D    P  A+V
Sbjct: 1244 SDRAVEPLSATV 1255



 Score = 42.0 bits (97), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 48/180 (26%), Positives = 85/180 (47%), Gaps = 14/180 (7%)

Query: 6    DFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLL 65
            D  Q   + V A    N    + AT+ ++    +    +FS++  S +  E+  V  V+ 
Sbjct: 3223 DLNQNFFITVTAKDKGNPPLSSQATVHITVTEENYHTPEFSQSHISATIPESHSVGAVVR 3282

Query: 66   TVTTNKPRDLR----VKYWLSNDYGER-FSI-SRQGDISLMQCLDYETEDSYRFTVYATD 119
             V+  + RD      ++Y +S+   E  F+I S  G ++L + LDYE    +  T+ ATD
Sbjct: 3283 AVSA-RDRDTAMNGLIRYDISSGNEEGIFAINSSTGVLTLAKALDYELCSKHEMTISATD 3341

Query: 120  ---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG 176
                  T S ++ ++V++VND  P F  P  + F P + + +   G+ +  + A D D G
Sbjct: 3342 GGWVARTGSCSLTVNVIDVNDNSPVF-VP--DEFFPTV-MENAPSGTTVIHLNATDADSG 3397



 Score = 41.6 bits (96), Expect = 0.66,   Method: Compositional matrix adjust.
 Identities = 37/140 (26%), Positives = 66/140 (47%), Gaps = 13/140 (9%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGERFSIS-RQGDISLM 100
            F  +E+  + +EN P    ++ +     +   +  + Y + +   + F I    G I+  
Sbjct: 3367 FVPDEFFPTVMENAPSGTTVIHLNATDADSGTNAVIAYTVQSSDSDLFVIDPNTGVITTQ 3426

Query: 101  QCLDYETEDSYRFTVYA---TDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLA 157
              LD+ET+ SY  TV A    D    + ATV+I +   N++ PRF    Y     +  ++
Sbjct: 3427 GFLDFETKQSYHLTVKAFNVPDEEKCSFATVDIQLKGTNEYVPRFVSKLY-----YFEVS 3481

Query: 158  DLTP-GSVIGKVEAADGDKG 176
            +  P G+ +G+V A+D D G
Sbjct: 3482 EAAPRGTAVGEVFASDRDMG 3501



 Score = 39.7 bits (91), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 37/135 (27%), Positives = 64/135 (47%), Gaps = 8/135 (5%)

Query: 89   FSISRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYP 145
            FS++  G +S  + +D E    +  +V   D+    M+++ TV+I+V++ ND   + R  
Sbjct: 3731 FSLNTAGVLSTTREIDREQIADFYLSVVTRDSGAPQMSSTGTVHITVLDQNDNPSQSR-- 3788

Query: 146  QYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSGHISIVDLS 205
              E+F+ +    +L PG  +G V+  D D  D    SL      +FSI  +G   +    
Sbjct: 3789 TVEIFVNY--YGNLFPGGTLGSVKPQDPDVLDSFHCSLTSGVTSLFSI-PAGSCDLSSQP 3845

Query: 206  ALNTSTIQLVVVATD 220
                 T  L VV++D
Sbjct: 3846 RSTDGTFDLTVVSSD 3860



 Score = 39.7 bits (91), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 39/106 (36%), Positives = 54/106 (50%), Gaps = 10/106 (9%)

Query: 95   GDISLMQCLDYETEDSYRFTVYATDT----LMTTSATVNISVVNVNDWDPRFRYPQYELF 150
            G I     LD ET+D+Y   V A+D      +++S +V +SV +VND  PRF   Q+  +
Sbjct: 2588 GQIITSALLDRETKDNYTLVVVASDAGSPESLSSSTSVLVSVTDVNDNPPRF---QHHPY 2644

Query: 151  LPHIPLADLTPGSVIGKVEAADGDKGDRVTL--SLRGPYEKMFSIN 194
            + HIP   L PGS +  V   D D G    L  SL G   + F I+
Sbjct: 2645 VTHIPSPTL-PGSFVFAVTVTDEDIGSNSELHYSLSGRNSEKFHID 2689



 Score = 39.3 bits (90), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 67/260 (25%), Positives = 112/260 (43%), Gaps = 41/260 (15%)

Query: 12   TLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPV--NYVLLTVTT 69
            TL V+A    +  R  + T+ ++    +     F  + YSV+  ENL      +L  V  
Sbjct: 2397 TLTVQATDRGSSPRTDVCTVTITLLDMNDFVPVFELSPYSVNVPENLGTLPRTILQVVAR 2456

Query: 70   NKPR--DLRVKY-WLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDT---LMT 123
            +  +  + R+ Y  L  +    F+++  G++ ++Q LD E  D++   V A D     +T
Sbjct: 2457 DDDQGPNSRLSYVLLGGNEDNAFALTASGELRVIQSLDREARDNFVLVVTAADAGSPALT 2516

Query: 124  TSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDR--VTL 181
             + T+N+ V ++ND  P F    +   +P     D   G+ +  V A+D D      ++ 
Sbjct: 2517 GTGTINVLVDDINDNVPTFASNMHFTAIPE----DAPTGTDVLLVNASDADAAANAVISY 2572

Query: 182  SLRGPYEKMFSINDS-GHI---SIVDLSALNTSTIQLVVVATDTG--------------- 222
            S+ G     F+IN S G I   +++D    +  T  LVVVA+D G               
Sbjct: 2573 SIIGG-NSQFTINPSTGQIITSALLDRETKDNYT--LVVVASDAGSPESLSSSTSVLVSV 2629

Query: 223  -----NPPRQASVPAIMHFP 237
                 NPPR    P + H P
Sbjct: 2630 TDVNDNPPRFQHHPYVTHIP 2649



 Score = 39.3 bits (90), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 77/167 (46%), Gaps = 24/167 (14%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKP-----RDLRVKYWLSNDYGERFSIS-RQGDIS 98
            F K+   V  LEN+ +  ++ +VT          DL      SN++G  FSIS   G I 
Sbjct: 1486 FPKSTLFVDVLENMRIGELVSSVTATDSDSGVNADLHYTITGSNNHGT-FSISPNTGSIF 1544

Query: 99   LMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELF---LP 152
            L + LD+ET+  Y+  + A D      +++ +V I V + ND  P F  P  ++F   + 
Sbjct: 1545 LAKKLDFETQSLYKLNITAKDQGRPPRSSTMSVVIHVRDFNDNPPSF--PPGDIFKSIME 1602

Query: 153  HIPLADLTPGSVIGKVEAADGDKGDRVTLSL----RGPYEKMFSIND 195
            ++PL     G+ +  V A D D      LS     + P    FSI++
Sbjct: 1603 NVPL-----GTSVISVTAHDPDADINGQLSYAIIQQMPRGNHFSIDE 1644



 Score = 38.9 bits (89), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 56/208 (26%), Positives = 91/208 (43%), Gaps = 23/208 (11%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGERFSISRQ-GDISLM 100
           F  + Y     E+  V   +L V     ++  +  ++Y L  D G  F +  + G I++ 
Sbjct: 421 FGSSHYQAGVPEDAVVGSSVLQVAAADADEGTNADIRYRL-QDEGTPFQMDPETGLITVR 479

Query: 101 QCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDP--RFRY-PQYELFLPHI 154
           + LD+E    Y  TV ATD     +T  A   I +++VND DP  +FRY P    +    
Sbjct: 480 EPLDFEARRQYSLTVQATDRGVPSLTGRAEAIIQLLDVNDNDPVVKFRYFPATSRYASVD 539

Query: 155 PLADLTPGSVIGKVEAADGD----KGDRVTLSLRGPYEKMFSINDSG--HISIVDL-SAL 207
             A +  G+V+  +   D D     G+     L G  ++ F +  S   ++S++ + SAL
Sbjct: 540 ENAQV--GTVVALLTVTDADSPAANGNISVQILGGNEQRHFEVQRSKVPNLSLIKVASAL 597

Query: 208 NTSTI---QLVVVATDTGNPPRQASVPA 232
           +   I    L V  +D    P  A V A
Sbjct: 598 DRERIPSYNLTVSVSDNSGAPPTAEVQA 625


>gi|345485230|ref|XP_003425221.1| PREDICTED: LOW QUALITY PROTEIN: protein dachsous-like [Nasonia
            vitripennis]
          Length = 3357

 Score = 75.1 bits (183), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 73/240 (30%), Positives = 110/240 (45%), Gaps = 27/240 (11%)

Query: 14   VVRAIQYDNQDRYALATLIVSKAGTSLR-----ELQ--------FSKNEYSVSALENLPV 60
            + R + Y+ Q R+ L    +  AG S       E+Q        F +NEY V   E   +
Sbjct: 943  LARRLDYETQQRHRLMISALDGAGLSANLSLSVEVQDVNDNPPVFERNEYHVEVSEGARL 1002

Query: 61   NYVLLTVTT---NKPRDLRVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYA 117
            N+ ++ VT    +   + R+ Y L      R S    G ++L   LD ET D Y  TV A
Sbjct: 1003 NWQIVQVTAVDLDTGNNARLSYRLQGSGPFRVS-PNSGWVTLAGQLDRETLDRYSLTVLA 1061

Query: 118  TDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGD 174
            TD      T SA++ ++V++ ND +PRF    Y   L    L +L  G ++G V A+D D
Sbjct: 1062 TDNGSPAATASASILVTVLDDNDNEPRFEKDLYAFEL----LENLPSGMLVGTVSASDTD 1117

Query: 175  KGDRVTLSLRG-PYEKMFSIN-DSGHISIVD-LSALNTSTIQLVVVATDTGNPPRQASVP 231
             G    L          F+++ D+G I+  + L   + +  +LV+ A D G P R A VP
Sbjct: 1118 LGKNALLRYAVVQANSSFAVDPDTGEITTREPLDRESKAVHELVLEARDQGTPSRAARVP 1177



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 55/167 (32%), Positives = 83/167 (49%), Gaps = 19/167 (11%)

Query: 77   VKYWLSNDYGERFSI---SRQGDISLMQCLDYETEDSYRFTVYATDTL-----MTTSATV 128
            ++Y L  +Y    S    S  G ++L + LD E    Y   + A D       + ++ TV
Sbjct: 1442 LRYGLVAEYPPTGSFAVDSLTGALTLAKPLDREERSEYTLVLKAEDRAPAAERLASTVTV 1501

Query: 129  NISVVNVNDWDPRFRYPQYELFLPHIPLA-DLTPGSVIGKVEAADGDKGDRVTLSL---R 184
             + V++ ND DP F  PQ    +  +P+A D+ PG  + +V A D D+GD   +S     
Sbjct: 1502 RVLVLDQNDNDPVFVAPQ----VSRLPVAPDVPPGGALVRVVAVDKDEGDNGRVSYVISS 1557

Query: 185  GPYEKMFSIN-DSGHISIVDLSALNTSTIQLVVVATDTGNPPRQASV 230
            G  E  FS+  DSG +S+V    L  S  +L + A D G PPR+AS+
Sbjct: 1558 GNEEGRFSVGYDSGLVSLVRPPLLRPS--ELEITANDHGVPPRKASL 1602



 Score = 58.5 bits (140), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 61/198 (30%), Positives = 93/198 (46%), Gaps = 19/198 (9%)

Query: 45   FSKNEYSVSALENL-PVNYVLLTVTTNKPRDL--RVKYWLSNDYGERFSISR-QGDISLM 100
            FS+ +YS S  E++ P + ++    T+  + +  ++ Y ++ +    F +    G I+  
Sbjct: 1849 FSQGKYSTSVSEDVAPESSIMQVRATDSDQGVNGKITYSIAEESSWLFRVDNLTGVITTA 1908

Query: 101  QCLDYETEDSYRFTVYATDT----LMTTSATVNISVVNVNDWDPRFR-YPQYELFLPHIP 155
              LD E +  YRF V ATD+       TS  V I + +VND  P F  YP    F   +P
Sbjct: 1909 GSLDREQQSLYRFLVVATDSGKYEARQTSVPVEIYIGDVNDNRPIFEEYP----FKARVP 1964

Query: 156  LADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEK---MFSINDSGHISIV--DLSALNTS 210
            ++   PG  I +V+A D D      +    P E+    F I+ S  I  V   L+  N  
Sbjct: 1965 VS-TQPGQNILRVKANDADDAANGEIVYSFPREQDKPKFRIHPSTGIVTVTSSLAQENGR 2023

Query: 211  TIQLVVVATDTGNPPRQA 228
              +L V+ATD GNPP  A
Sbjct: 2024 VYRLEVLATDKGNPPLSA 2041



 Score = 58.2 bits (139), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 58/192 (30%), Positives = 91/192 (47%), Gaps = 19/192 (9%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGERFSISRQ-GDISL 99
           +F ++ Y    LE       ++ V+    ++  + RV+Y L N     F+I    G IS 
Sbjct: 442 RFLRDSYEAHLLEASEPGTSVIRVSAEDADEGPNARVRYSLLNSTW--FAIDEDTGLIST 499

Query: 100 MQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
              +D E + +   TV ATD+    ++ SATV ++V +VND +P F  P Y + LP    
Sbjct: 500 AAHVDCEADPAPLLTVLATDSGKPPLSASATVRVTVHDVNDNEPIFEKPLYNVSLPE--- 556

Query: 157 ADLTPGSVIGKVEAADGDKGDRVTLSL-----RGPYEKMFSINDSGHISI-VDLSALNTS 210
            DL PG    KV+A+D D G    ++       G  E+    +D+G I +   L     +
Sbjct: 557 -DLPPGRCFIKVQASDPDCGVNAMVNYTLAPSSGAAEQFVVRSDTGDICVRAPLDRETAA 615

Query: 211 TIQLVVVATDTG 222
             +L V+ATD G
Sbjct: 616 YHELPVIATDRG 627



 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 53/200 (26%), Positives = 99/200 (49%), Gaps = 23/200 (11%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLR---VKYWLSNDYGERFSI-SRQGDISL 99
            QF  +   +S  E+ P++  L   + + P       ++Y + ++  E F I +R G++ L
Sbjct: 884  QFPLSSVRISVAESHPLHTALYVASASDPDSTPATPLRYSIQHNSNELFGIDARSGEVYL 943

Query: 100  MQCLDYETEDSYRFTVYATDTL-MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLAD 158
             + LDYET+  +R  + A D   ++ + ++++ V +VND  P F   +Y     H+   +
Sbjct: 944  ARRLDYETQQRHRLMISALDGAGLSANLSLSVEVQDVNDNPPVFERNEY-----HV---E 995

Query: 159  LTPGSVIG----KVEAADGDKGDRVTLSLRGPYEKMFSIN-DSGHISIVDLSALNTSTI- 212
            ++ G+ +     +V A D D G+   LS R      F ++ +SG +++     L+  T+ 
Sbjct: 996  VSEGARLNWQIVQVTAVDLDTGNNARLSYRLQGSGPFRVSPNSGWVTLA--GQLDRETLD 1053

Query: 213  --QLVVVATDTGNPPRQASV 230
               L V+ATD G+P   AS 
Sbjct: 1054 RYSLTVLATDNGSPAATASA 1073



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 50/173 (28%), Positives = 82/173 (47%), Gaps = 22/173 (12%)

Query: 81  LSNDYGERFSIS----RQG----DISLMQCLDYETEDSYRFTVYATDT---LMTTSATVN 129
           +S + GE F ++    R G    D+     LD E    Y+  V A D     + +   VN
Sbjct: 153 VSGNEGEAFRLAAHRGRDGVLYLDLQNSAALDREARAGYQLLVEALDGGSPPLRSRLHVN 212

Query: 130 ISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGD--RVTLSL---R 184
           ++V +VND  P F+  +Y   +P     + T G+ + KV+A+D D G+  R+  S+   +
Sbjct: 213 VTVQDVNDNPPIFKQSRYVASVPE----NATVGTAVLKVDASDADAGENGRIEYSINRRQ 268

Query: 185 GPYEKMFSINDSGHISIVD--LSALNTSTIQLVVVATDTGNPPRQASVPAIMH 235
              E+MF I+    +  V+  L   +    +LV+VA D G  P +AS    +H
Sbjct: 269 SDREEMFRIDPETGMVYVNKALDFESKERHELVIVARDRGAQPLEASAFLSVH 321



 Score = 48.9 bits (115), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 64/206 (31%), Positives = 96/206 (46%), Gaps = 16/206 (7%)

Query: 27  ALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPR---DLRVKYWLSN 83
           A AT+ V+    +  E  F K  Y+VS  E+LP     + V  + P    +  V Y L+ 
Sbjct: 527 ASATVRVTVHDVNDNEPIFEKPLYNVSLPEDLPPGRCFIKVQASDPDCGVNAMVNYTLAP 586

Query: 84  DYG--ERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDT-LMTTSATVNISVVNVNDWD 139
             G  E+F + S  GDI +   LD ET   +   V ATD   ++T++ V + + +VND  
Sbjct: 587 SSGAAEQFVVRSDTGDICVRAPLDRETAAYHELPVIATDRGGLSTTSIVRVLMTDVNDNR 646

Query: 140 PRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYE-KMFSINDS 196
           P F   +Y + L     A+      I +  A+D D G   +V   + G  E  +F I+ S
Sbjct: 647 PIFEPREYNVSL----RAESPVSGPILRCVASDADAGFFGQVAYRISGGNEANIFRIDRS 702

Query: 197 -GHISIVDLSAL-NTSTIQLVVVATD 220
            G I +   + L  +ST  L V ATD
Sbjct: 703 TGEIHVAQTNQLAQSSTYLLNVTATD 728



 Score = 47.8 bits (112), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 54/217 (24%), Positives = 105/217 (48%), Gaps = 19/217 (8%)

Query: 27   ALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVT---TNKPRDLRVKYWLSN 83
            A A+++V+    +  E +F K+ Y+   LENLP   ++ TV+   T+  ++  ++Y +  
Sbjct: 1071 ASASILVTVLDDNDNEPRFEKDLYAFELLENLPSGMLVGTVSASDTDLGKNALLRYAVVQ 1130

Query: 84   DYGERFSISRQ-GDISLMQCLDYETEDSYRFTVYATDTLMTTSAT---VNISVVNVNDWD 139
                 F++    G+I+  + LD E++  +   + A D    + A    + +SV++VND  
Sbjct: 1131 -ANSSFAVDPDTGEITTREPLDRESKAVHELVLEARDQGTPSRAARVPLRVSVLDVNDNS 1189

Query: 140  PRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEK------MFSI 193
            P    PQ ++        +  PG+ + +V A D D G+  +++     ++      +F+I
Sbjct: 1190 PEIVDPQGDVVSVR---EEQPPGTEVARVRALDNDLGENASVTYTILKDRDSDGYNVFAI 1246

Query: 194  ND-SGHISI-VDLSALNTSTIQLVVVATDTGNPPRQA 228
            +  SG I   V L   + +  +L V A+D G P R +
Sbjct: 1247 DPISGMIKTKVALDHEDRNVYRLSVKASDAGRPARHS 1283



 Score = 47.8 bits (112), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 49/137 (35%), Positives = 63/137 (45%), Gaps = 17/137 (12%)

Query: 103 LDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADL 159
           LD E    Y  +V ATD     +    +  + V +VND  PRF    YE  L    L   
Sbjct: 401 LDREERPHYELSVEATDAGTPPLRAVRSFRLLVTDVNDNAPRFLRDSYEAHL----LEAS 456

Query: 160 TPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIN-DSGHISI---VDLSALNTSTIQ 213
            PG+ + +V A D D+G   RV  SL       F+I+ D+G IS    VD  A       
Sbjct: 457 EPGTSVIRVSAEDADEGPNARVRYSLLN--STWFAIDEDTGLISTAAHVDCEA--DPAPL 512

Query: 214 LVVVATDTGNPPRQASV 230
           L V+ATD+G PP  AS 
Sbjct: 513 LTVLATDSGKPPLSASA 529



 Score = 47.8 bits (112), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 33/96 (34%), Positives = 50/96 (52%), Gaps = 4/96 (4%)

Query: 83   NDYGERFSIS-RQGDISLMQCLDYETEDSYRFTVYATDT-LMTTSATVNISVVNVNDWDP 140
            +D  + FSI  R G ++     DYE  + Y F+V ATDT   +T+  V + + + +++ P
Sbjct: 2779 DDSWKLFSIDPRSGAVTTRAVFDYEQRNRYAFSVRATDTGGRSTAVRVRVEIDSRDEFYP 2838

Query: 141  RFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG 176
            +F    Y   +   P   L  GSV+G V A D DKG
Sbjct: 2839 QFTERMYRFGV--RPGTALQSGSVLGYVTATDRDKG 2872



 Score = 45.8 bits (107), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 66/260 (25%), Positives = 115/260 (44%), Gaps = 43/260 (16%)

Query: 11   ITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALE-NLPVNYVLLTVTT 69
            +TLV + +  D  + YA   L+V  +  +     F++++YS + LE N   ++V+    +
Sbjct: 2174 LTLVAKTVGPDPLEAYA--KLVVRISDVNDNAPIFTQSQYSATVLEGNAKGDFVVKLSAS 2231

Query: 70   NKPRDLRVK---YWLSNDYGERFSIS--RQGDISLMQCLDYETEDSYRFTVYATDT---L 121
            +  + L  +   + +  +    F+I+    G +     LD E  + YR T+ ATD     
Sbjct: 2232 DMDQGLNSRLLYHIVDGNPDNAFTINPPYSGIVRTNIVLDREIREKYRLTIIATDQGNPQ 2291

Query: 122  MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVT- 180
            +T +A +++ V+++ND  P F  P+ ++   H   A   PGSV+  + A D D    +T 
Sbjct: 2292 LTGTAALSVRVIDINDNQPTF--PEPKIISVHEGTA---PGSVLTAITANDVDSSPALTY 2346

Query: 181  ----LSLRGPYEKMFSINDSGH-----------------ISIVDLSALNTSTIQLVVVAT 219
                +S  GP    FSI+  G                  + ++    L+ +T +L V  T
Sbjct: 2347 RFSNVSHPGP----FSIDRFGGRVVLTGKLDAELRSEYTLHVLASDGLHEATTELTVRVT 2402

Query: 220  D-TGNPPRQASVPAIMHFPE 238
            D   NPPR   V  I    E
Sbjct: 2403 DLNDNPPRFEQVAYITTLSE 2422



 Score = 42.4 bits (98), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 44/149 (29%), Positives = 65/149 (43%), Gaps = 16/149 (10%)

Query: 89   FSISR-QGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQY 147
            FSI R  G + L   LD E    Y   V A+D L   +  + + V ++ND  PRF    Y
Sbjct: 2357 FSIDRFGGRVVLTGKLDAELRSEYTLHVLASDGLHEATTELTVRVTDLNDNPPRFEQVAY 2416

Query: 148  ELFLPHIPLADLTPGSV--IGKVEAADGDKGDR---VTLSLRGPYEKMFSINDSGHISIV 202
               L          G+V  +  V A D D  D    +   L  P  K F+++    + +V
Sbjct: 2417 ITTLSE------ERGNVQEVLSVNATDDDSTDENNGIRYRLVRPM-KGFTVHSVSGVLLV 2469

Query: 203  DLSALNT---STIQLVVVATDTGNPPRQA 228
            + +AL       I+L ++A D+G PP  A
Sbjct: 2470 NRTALPKPLPKEIELSIIAEDSGKPPLSA 2498



 Score = 39.7 bits (91), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 53/207 (25%), Positives = 92/207 (44%), Gaps = 29/207 (14%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLS---NDYGERFSISRQ-GDI 97
           F ++ Y  S  EN  V   +L V     +   + R++Y ++   +D  E F I  + G +
Sbjct: 225 FKQSRYVASVPENATVGTAVLKVDASDADAGENGRIEYSINRRQSDREEMFRIDPETGMV 284

Query: 98  SLMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFL--- 151
            + + LD+E+++ +   + A D     +  SA +++ V +VND  P        +FL   
Sbjct: 285 YVNKALDFESKERHELVIVARDRGAQPLEASAFLSVHVSDVNDNQPAITV----IFLSDD 340

Query: 152 --PHIPLADLTPGSVIGKVEAADGDKG---DRVTLSLRGPYEKMFSINDSGHI---SIVD 203
             P I  +   PG  + ++  +D D        T++LRG  E  F +    +I    +V+
Sbjct: 341 ATPKISES-AQPGEFVARISVSDPDSRAEYSNATVTLRG-GEGHFGLATRDNIIYLVVVE 398

Query: 204 --LSALNTSTIQLVVVATDTGNPPRQA 228
             L        +L V ATD G PP +A
Sbjct: 399 RPLDREERPHYELSVEATDAGTPPLRA 425


>gi|198475184|ref|XP_002132853.1| GA26057 [Drosophila pseudoobscura pseudoobscura]
 gi|198138709|gb|EDY70255.1| GA26057 [Drosophila pseudoobscura pseudoobscura]
          Length = 3586

 Score = 75.1 bits (183), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 68/200 (34%), Positives = 107/200 (53%), Gaps = 20/200 (10%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTTNKPR---DLRVKYWLSNDYGERFSI-SRQGDISL 99
            +F   +Y  S  E+ P+   ++ +         + R+ Y L+N+   +F+I S+ G I+ 
Sbjct: 1958 RFDLPKYVASVAEDAPLGASVVRIKATDADLGVNARLVYSLANETQWQFAIDSKSGLITT 2017

Query: 100  MQCLDYETEDSYRFTVYATD----TLMTTSATVNISVVNVNDWDPRF-RYPQYELFLPHI 154
            +  LD E + SY F V ATD     + +    V I+V++VND  P F RYP    ++  +
Sbjct: 2018 VGKLDRELQSSYSFMVLATDGGRYEVRSARVAVQINVLDVNDNRPVFERYP----YIGQV 2073

Query: 155  PLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIN-DSGHISIVD-LSALNTS 210
            P A + PG  + KV+A D D+G    +  SL+G   K F IN ++G +S    L++ +  
Sbjct: 2074 P-ALIQPGQTLLKVQAHDADQGLNGELLYSLKGDAGK-FRINPNTGALSATQSLASESGR 2131

Query: 211  TIQLVVVATDTGNPPRQASV 230
             +QL VVA D GNPP Q+SV
Sbjct: 2132 LLQLEVVARDKGNPP-QSSV 2150



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 69/218 (31%), Positives = 96/218 (44%), Gaps = 32/218 (14%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWL----------------SNDY 85
            F ++EY+V+  E+ PVN  ++ V     +   + R+ Y +                S+D 
Sbjct: 1033 FERDEYAVNVSESRPVNSQIVQVNATDLDTGNNARITYRIVDAGADNATAPAAAGGSSDV 1092

Query: 86   GERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPR 141
               F I    G I L   LD ET D Y+  + ATD           V + V++ ND DPR
Sbjct: 1093 ALHFGIFPNSGWIYLRAPLDRETRDRYQLVILATDNGTPAAHARTRVLVRVLDANDNDPR 1152

Query: 142  FRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDR--VTLSLRGPYEKMFSIND-SGH 198
            F  PQYE  +      +L  GSV+G V A D D G+   V  SL  P    F ++  +G 
Sbjct: 1153 FLRPQYEFRIEE----NLRRGSVVGAVAARDLDLGENAAVRYSLL-PANSSFQVHPVTGE 1207

Query: 199  ISIVD-LSALNTSTIQLVVVATDTGNPPRQASVPAIMH 235
            IS  + L     +   LVV A D G P R A  P  +H
Sbjct: 1208 ISTREPLDRELRALYDLVVEARDQGTPVRSARAPVRVH 1245



 Score = 62.0 bits (149), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 64/210 (30%), Positives = 97/210 (46%), Gaps = 17/210 (8%)

Query: 29  ATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGER 88
           AT++V+    +  E  F ++ Y+VS  EN PV   +L V+ + P D  V   ++   GE 
Sbjct: 594 ATVLVTIHDVNDNEPIFDQSFYNVSVAENEPVGRCILKVSASDP-DCGVNAMVNYTLGEG 652

Query: 89  FS-------ISRQGDISLMQCLDYETEDSYRFTVYATDT-LMTTSATVNISVVNVNDWDP 140
           F         S  G+I +   LD+E   SY F V ATD   ++T+A + + + +VND  P
Sbjct: 653 FKHLTEFEVRSASGEICIAGELDFERRSSYEFPVLATDRGGLSTTAMIKMQLTDVNDNRP 712

Query: 141 RFRYPQYELFLPHIPLADLTPGSV-IGKVEAADGDKGDRVTLSLR---GPYEKMFSIN-D 195
            F   +Y + L   P       S+ +  V A D D G    +S R   G    +F I+  
Sbjct: 713 VFYPREYNVSLKESPPTQTPAASIPVVAVVATDPDSGSFGQVSYRIVAGNEAGIFRIDRS 772

Query: 196 SGHISIVDLSALNTSTI---QLVVVATDTG 222
           SG I +    +L+  T     L + ATD G
Sbjct: 773 SGEIFVTRPDSLSVRTQPMHMLNISATDGG 802



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 63/208 (30%), Positives = 98/208 (47%), Gaps = 29/208 (13%)

Query: 45  FSKNEYSVSALENLPVNYVLLTV---TTNKPRDLRVKYWLS---NDYGERFSISRQ-GDI 97
           F+++ Y  +  EN  V   +L V    T+   +  V+Y ++   +D  + F I  Q G I
Sbjct: 285 FNQSRYFATVPENATVGTSVLQVYASDTDAEENGLVEYAINRRQSDKEQMFRIDPQTGAI 344

Query: 98  SLMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFL--- 151
            + + LD+ET++ +   V A D     + T+A V+I V +VND  P        +FL   
Sbjct: 345 FINKALDFETKELHELVVVAKDHGEQPLETTAFVSIRVTDVNDNQPTINV----IFLSDD 400

Query: 152 --PHIPLADLTPGSVIGKVEAADGDKGDR---VTLSLRGPYEKMFSI---NDSGHISIVD 203
             P I  +   PG  + ++   D D       V +SL G  E  F++   + S ++ IV+
Sbjct: 401 ASPKISES-AQPGEFVARISVHDPDSKTEYANVNVSLNGG-EGHFALTTSDSSIYLVIVN 458

Query: 204 L--SALNTSTIQLVVVATDTGNPPRQAS 229
           L     +TS   L VVATD G PP  AS
Sbjct: 459 LPLDRESTSNYTLSVVATDKGTPPLHAS 486



 Score = 45.1 bits (105), Expect = 0.060,   Method: Compositional matrix adjust.
 Identities = 48/146 (32%), Positives = 72/146 (49%), Gaps = 14/146 (9%)

Query: 86   GERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDTLMTTS--ATVNISVV--NVNDWDP 140
            G +FSI +R G++S  + LD E    Y   V A+D    TS     NI+V+  + ND  P
Sbjct: 1899 GNKFSIDARSGELSC-RPLDREQHARYTLQVQASDRGQPTSRQGHCNITVLVEDQNDNAP 1957

Query: 141  RFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIND-SG 197
            RF  P+Y   +      D   G+ + +++A D D G   R+  SL    +  F+I+  SG
Sbjct: 1958 RFDLPKYVASVAE----DAPLGASVVRIKATDADLGVNARLVYSLANETQWQFAIDSKSG 2013

Query: 198  HISIV-DLSALNTSTIQLVVVATDTG 222
             I+ V  L     S+   +V+ATD G
Sbjct: 2014 LITTVGKLDRELQSSYSFMVLATDGG 2039



 Score = 44.3 bits (103), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 58/192 (30%), Positives = 87/192 (45%), Gaps = 16/192 (8%)

Query: 45   FSKNEYSVSALENLPVNYVLLTV---TTNKPRDLRVKYWL-SNDYGERFSI-SRQGDISL 99
            F K  Y+    E++P   V+ +V   + +      V+Y + S D    F I    G+I +
Sbjct: 826  FEKARYNYYVKEDIPQGTVVGSVIATSGDTAHRSPVRYSIYSGDPDGYFGIEGGSGNIRI 885

Query: 100  MQCLDYETEDSYRFTVYAT--DTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLA 157
             + LD+E +      + AT  +  +     VNI V +VND  P F      + +P    A
Sbjct: 886  ARPLDHEAKGQVLLNIQATAGEPPVYGHTQVNIEVEDVNDNAPEFEASLVRISVPEN--A 943

Query: 158  DLTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSIN-DSGHISIVDLSALNTSTIQ- 213
            DL  G+ +    A D D G   +VT SL     ++F+I+  SGH+ +       TS    
Sbjct: 944  DL--GAPLYAAHAHDKDSGSSGQVTYSL-ARERQLFAIDPRSGHLVLSQHLDYETSQRHS 1000

Query: 214  LVVVATDTGNPP 225
            LVV ATD G PP
Sbjct: 1001 LVVTATDGGVPP 1012



 Score = 42.4 bits (98), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 40/144 (27%), Positives = 66/144 (45%), Gaps = 14/144 (9%)

Query: 95   GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFL 151
            G+IS  + LD E    Y   V A D    + +  A V + V +VND  P    PQ ++  
Sbjct: 1206 GEISTREPLDRELRALYDLVVEARDQGTPVRSARAPVRVHVSDVNDNAPEIADPQEDVVS 1265

Query: 152  PHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRG---PYEKMFSINDSGHI--SIVD 203
                  +  PG+ + ++ A D D G   +++   ++G       +FSI+ +  +  + V 
Sbjct: 1266 VR---EEQPPGTEVVRIRATDRDHGQNASITYSIVKGRDSDGHGLFSIDPATGVIRTRVV 1322

Query: 204  LSALNTSTIQLVVVATDTGNPPRQ 227
            L     S  +L V ATD G PP++
Sbjct: 1323 LDHEERSIYRLGVAATDGGQPPKE 1346



 Score = 40.8 bits (94), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 47/108 (43%), Gaps = 6/108 (5%)

Query: 92   SRQGDISLMQCLDYETEDSYRFTVYATDTLMTTS-ATVNISVVNVNDWDPRFRYPQYELF 150
            S  G +S     D+E    Y   + A+D     +   V + V + +++ P+F    Y   
Sbjct: 2922 SHSGMVSSAAVFDFEQRQRYDMELRASDMGGKGARVAVRVEVDSRDEFAPQFSERTYRFV 2981

Query: 151  LPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDS 196
            LP    A L  G V+G+V A D D G   RV   L  P+   F +N S
Sbjct: 2982 LP--AAAALPQGFVVGQVTATDADSGPDGRVVYQLSAPH-THFKVNRS 3026



 Score = 40.4 bits (93), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 45/156 (28%), Positives = 65/156 (41%), Gaps = 22/156 (14%)

Query: 95   GDISLMQCLDYETEDSYRFTVYATDT------LMTTSATVNISVVNVNDWDPRFRYPQYE 148
            G +SL   LD+E    Y   V A D        + TS TV + V++ ND  P F  P  +
Sbjct: 1554 GSLSLQAPLDFEAVQEYTLIVQALDQSSNASERLQTSVTVRLRVLDANDNAPEFVSPLAK 1613

Query: 149  LFLPHIPLADLTP-GSVIGKVEAADGDKGDRVTLSLR---GPYEKMFSINDSGHISIVDL 204
                 + L+D T  G  +  V A D D GD   L+     G  E  F I  S    +++L
Sbjct: 1614 GGSASVFLSDATRIGETVAHVVALDRDAGDNGRLAYDIEGGNGEGRFRI--SAATGVIEL 1671

Query: 205  ---------SALNTSTIQLVVVATDTGNP-PRQASV 230
                      A       L++ A D G P PR++++
Sbjct: 1672 VKSLPPASEDADKNGRFTLLISAVDHGLPEPRKSTL 1707



 Score = 40.0 bits (92), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 52/178 (29%), Positives = 76/178 (42%), Gaps = 31/178 (17%)

Query: 76   RVKYWLSNDYGERFSIS-RQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNIS 131
            +V Y L+ +  + F+I  R G + L Q LDYET   +   V ATD     + T+ T+ + 
Sbjct: 964  QVTYSLARER-QLFAIDPRSGHLVLSQHLDYETSQRHSLVVTATDGGVPPLATNLTILVD 1022

Query: 132  VVNVNDWDPRFRYPQYELFLPHIPLADLTP-GSVIGKVEAADGDKGDRVTLSLR----GP 186
            V +VND  P F   +Y      + +++  P  S I +V A D D G+   ++ R    G 
Sbjct: 1023 VQDVNDNPPVFERDEYA-----VNVSESRPVNSQIVQVNATDLDTGNNARITYRIVDAGA 1077

Query: 187  YEKMFSINDSG------HISIVDLSA-------LNTST---IQLVVVATDTGNPPRQA 228
                      G      H  I   S        L+  T    QLV++ATD G P   A
Sbjct: 1078 DNATAPAAAGGSSDVALHFGIFPNSGWIYLRAPLDRETRDRYQLVILATDNGTPAAHA 1135



 Score = 38.5 bits (88), Expect = 6.3,   Method: Compositional matrix adjust.
 Identities = 38/128 (29%), Positives = 60/128 (46%), Gaps = 10/128 (7%)

Query: 89   FSISR-QGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRF---RY 144
            F++ R  G + L + LDYE +  Y+  V A+D       T+ + V + ND  P F   + 
Sbjct: 2482 FALDRYSGKLVLKRRLDYEVQQEYQLEVIASDAAHEARTTLTVRVNDENDNAPVFLAQQP 2541

Query: 145  PQYELFLPHIP-LAD-LTPGSVIGKVEAADGD---KGDRVTLSLRGPYEKMFSINDSGHI 199
            P Y   LP +  +AD L+    +  V A D D      ++  S+  P E  FS+  S  +
Sbjct: 2542 PAYFAILPAVAEVADSLSMDLELLSVNATDADAEGSNSKIRYSIDPPVEG-FSVGASSGV 2600

Query: 200  SIVDLSAL 207
              V++S L
Sbjct: 2601 VSVNMSRL 2608


>gi|410956898|ref|XP_003985073.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 4 [Felis catus]
          Length = 4915

 Score = 74.7 bits (182), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 78/270 (28%), Positives = 123/270 (45%), Gaps = 44/270 (16%)

Query: 2    INEDD-----FLQPITLV---VRAIQYDNQDRYALATLIVSKAGTSLRELQ--------- 44
            +NEDD     FL P+T V    RA+ Y+ Q  Y L T+     G     ++         
Sbjct: 1848 VNEDDEDGIFFLNPVTGVFNLTRALDYEAQQYYIL-TVRAEDGGGQFTTIRVYFNVLDVN 1906

Query: 45   -----FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWL-SNDYGERFSISRQG 95
                 FS N YS S +ENLP+   +L        D    ++ Y + S D   +F++ + G
Sbjct: 1907 DNPPIFSLNSYSTSLMENLPLGSTVLVFNVTDADDGINSQLAYSIASGDSLGQFTVDKNG 1966

Query: 96   DISLMQCLDYETEDSYRFTVYATD------TLMTTSATVNISVVNVNDWDPRFRYPQYEL 149
             + +++ LD E++  Y   V A D      +  T++A V+I +++VND  P F  P+   
Sbjct: 1967 VLKVLKSLDRESQSFYNLVVQAHDLPQLPASRFTSTAHVSIILLDVNDNPPTFLSPK--- 2023

Query: 150  FLPHIPLADLTP-GSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIND-SGHISIV-DL 204
             L +IP  + TP  +++ K +A D D G    +  +L  P    FSI    G + +  +L
Sbjct: 2024 -LTYIP--ENTPIDTIVFKAQATDPDSGPNSYIEYTLLNPLGNKFSIGTIDGEVRLTGEL 2080

Query: 205  SALNTSTIQLVVVATDTGNPPRQASVPAIM 234
                 S   L VVATD G P   +S   ++
Sbjct: 2081 DREEVSNYTLTVVATDKGQPALSSSTEVVV 2110



 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 62/192 (32%), Positives = 93/192 (48%), Gaps = 24/192 (12%)

Query: 50   YSVSALENLPVNYVLLTVTTNKPRDLRV----KYWLSNDYGERFSIS-RQGDISLMQCLD 104
            +S    EN P+ Y +  VTT+   D+ V    +Y ++ D    F+I+   GDI + + L+
Sbjct: 2747 FSAYVPENSPLGYTVTRVTTSD-EDIGVNAISRYSIT-DTSLPFTINPSTGDIVISRPLN 2804

Query: 105  YETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSV 164
             E  D YR  V A D+  T S  V I V +VND  PRF  P Y L  P   L ++  GS 
Sbjct: 2805 REDTDRYRIRVSAHDSGWTVSTDVTIFVTDVNDNAPRFSRPSYYLDCPE--LTEI--GSK 2860

Query: 165  IGKVEAADGDKGD--RVTLSLRGPYEKMFSIN-DSGHI---------SIVDLSALNTSTI 212
            + +V A D D+G   +V   ++   E  F IN  +G I         ++   S +N +  
Sbjct: 2861 VTQVSATDPDEGSNGQVFYFIKSQSE-YFRINATTGEIFNKQVLKYQNVSGTSNVNINRH 2919

Query: 213  QLVVVATDTGNP 224
              +V ++D GNP
Sbjct: 2920 SFIVTSSDRGNP 2931



 Score = 58.5 bits (140), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 56/183 (30%), Positives = 89/183 (48%), Gaps = 16/183 (8%)

Query: 56   ENLPVNYVLLTVTTNKPR---DLRVKYWLSNDYGERFSISR-QGDISLMQCLDYETEDSY 111
            EN P++ ++       P    +  ++Y L N  G +FSI    G++ L   LD E   +Y
Sbjct: 2029 ENTPIDTIVFKAQATDPDSGPNSYIEYTLLNPLGNKFSIGTIDGEVRLTGELDREEVSNY 2088

Query: 112  RFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKV 168
              TV ATD     +++S  V + V+++ND +P F    Y++ +    L     G+ I +V
Sbjct: 2089 TLTVVATDKGQPALSSSTEVVVMVLDINDNNPVFVQALYKVEINENTLT----GTDIIQV 2144

Query: 169  EAADGDKGDRVTLS---LRGPYEKMFSIND-SGHISIVD-LSALNTSTIQLVVVATDTGN 223
             AADGD+G    +    + G   + F I+  +G I++   L    T T  L V ATD G+
Sbjct: 2145 YAADGDEGTNGQVRYGIVDGNANQEFRIDSVTGAITVAKPLDREKTPTYSLTVQATDRGS 2204

Query: 224  PPR 226
             PR
Sbjct: 2205 NPR 2207



 Score = 58.2 bits (139), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 47/158 (29%), Positives = 82/158 (51%), Gaps = 13/158 (8%)

Query: 87   ERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRF 142
             +F+I S  G ++L+  LDYE   +Y   + A D+    + ++ T+NI +++ ND  P F
Sbjct: 1256 RQFAIDSTSGQVTLIGKLDYEATPAYSLVIQAVDSGAISLNSTCTLNIDILDENDNTPSF 1315

Query: 143  RYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTL--SLRGPY-EKMFSIN-DSGH 198
              P+  LF+    L ++  G ++  V A D D GD   L  S+ G      FSI+ ++G 
Sbjct: 1316 --PKSTLFVD--VLENMRIGELVSSVTATDSDSGDNADLHYSITGTNNHGTFSISPNTGS 1371

Query: 199  ISIVDLSALNTSTI-QLVVVATDTGNPPRQASVPAIMH 235
            I +       T ++ +L + A D G PPR +++  ++H
Sbjct: 1372 IFLAKKLDFETQSLYKLNITAKDQGRPPRSSTMSVVIH 1409



 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 34/101 (33%), Positives = 49/101 (48%), Gaps = 5/101 (4%)

Query: 77   VKYWLSNDYGERFSIS-RQGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNV 135
            V Y + +   + F I    GD+   + LD E    Y   V A D L ++   +NI+V +V
Sbjct: 1743 VTYTIISGADDSFRIDPESGDLIATKRLDRERRSKYSLLVRADDGLQSSDMRINITVSDV 1802

Query: 136  NDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG 176
            ND  P+F  P Y   +P     D TPGS++  + A D D G
Sbjct: 1803 NDHTPKFSRPVYSFDIPE----DTTPGSLVAAILATDDDSG 1839



 Score = 55.8 bits (133), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 57/190 (30%), Positives = 95/190 (50%), Gaps = 15/190 (7%)

Query: 56   ENLPVNYVLLTVTTNKPRDLRVKYWL-SNDYGERFSISR-QGDISLMQCLDYETEDSYRF 113
            EN PV  ++ TVT +  R   + Y++ S + G  F I +  G +S+ Q LD+E    Y  
Sbjct: 2548 ENQPVGTLVTTVTGSSLRGEPLSYYIASGNLGSTFQIDQLTGQVSISQPLDFEKIQKYVI 2607

Query: 114  TVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEA 170
             + A D     +++   ++++V++VND  P F+    + F+  I L +L+P  ++  V A
Sbjct: 2608 WIEARDGGFPPLSSYEKLDLTVLDVNDNSPVFK---EDPFVSEI-LENLSPRKIL-TVSA 2662

Query: 171  ADGDKGDRVTLS---LRGPYEKMFSINDS-GHI-SIVDLSALNTSTIQLVVVATDTGNPP 225
             D D G    L    + G  E  F+IN + G I SI  L     S   L + ++D G+P 
Sbjct: 2663 MDKDSGPNGQLDYEIVNGNKEHSFTINHATGEIRSIRSLDREKISQYVLTIKSSDKGSPS 2722

Query: 226  RQASVPAIMH 235
            +  SV  I++
Sbjct: 2723 QSTSVKVIIN 2732



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 58/198 (29%), Positives = 88/198 (44%), Gaps = 24/198 (12%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLS-NDYGERFSISRQGDISLM 100
            F +  Y V+  E+ PVN     V     +   +  + Y ++  + G+ F I   G + + 
Sbjct: 996  FDQLSYEVTLSESEPVNSRFFKVQAFDKDSGANGEIAYSIAEGNTGDAFGIFPDGQLYIK 1055

Query: 101  QCLDYETEDSYRFTVYATDTLMTT-SATVNISVV--NVNDWDPRFRYPQYELFLPHIPLA 157
              LD E +D Y   V A+D  +   SATVN++V+  +VND  P F    Y  +      A
Sbjct: 1056 SELDRELQDRYVLLVVASDRAVEPLSATVNVTVILEDVNDNRPLFNSTNYTFYFEEEQRA 1115

Query: 158  DLTPGSVIGKVEAADGDKGD----RVTLSLRGPYEKMFSINDSGHIS---IVDLSAL--- 207
                GS +GKV A D D G     R +  +  P  ++ +I  SG I+     D  +L   
Sbjct: 1116 ----GSFVGKVNAIDKDFGPNGEVRYSFEMVQPDFELHAI--SGEITNTRQFDRESLMRQ 1169

Query: 208  -NTSTIQLVVVATDTGNP 224
              T+     V+ATD G P
Sbjct: 1170 RGTAVFSFTVIATDQGLP 1187



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 50/187 (26%), Positives = 95/187 (50%), Gaps = 12/187 (6%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRDLR--VKYWLS-NDYGERFSISR-QGDISLM 100
           FS+  YS    EN+ + Y + +V+ +   DL   + Y ++  D    F+I++  G ++  
Sbjct: 793 FSQAAYSFVVFENVALGYHVGSVSAST-MDLNANISYLITTGDQKGMFAINQVTGQLTTA 851

Query: 101 QCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLT 160
             +D E +  Y+  V A+   +T    VNI+V ++ND  P F      + +    + +  
Sbjct: 852 SVIDREEQSFYQLKVVASGGTVTGDTMVNITVKDLNDNSPHFLQAVESVNV----VENWQ 907

Query: 161 PGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIND-SGHISIVDLSALNTSTIQLVVV 217
            G  I + +A D D+G    V  SL+   + +F+IN+ +G+IS++    ++  + Q+ +V
Sbjct: 908 AGHSIFQAKAVDPDEGVNGMVLYSLKQNPKNLFTINEKNGNISLLGPLDVHAGSYQIEIV 967

Query: 218 ATDTGNP 224
           A+D G P
Sbjct: 968 ASDMGVP 974



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 73/237 (30%), Positives = 105/237 (44%), Gaps = 22/237 (9%)

Query: 11  ITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNE-YSVSALENLPVNYVLLTVTT 69
           I L + A       +++ A L+V+    +  +  FS+ E Y VS +EN P    LL +  
Sbjct: 548 IVLNISARDQGVHPKFSYAQLVVTLLDVNDEKPVFSQPEGYDVSVVENAPTGTELLVLRA 607

Query: 70  NKPRDL----RVKYWLSNDYGERFSISR---QGDISLMQCLDYETEDSYRFTVYATD--- 119
              RDL     V++ L     ++ S       G +S +  LD E +  Y   V ATD   
Sbjct: 608 TD-RDLGDNGTVRFSLQEAETDQRSFRLDPVSGRLSTVTSLDREEQAFYSLLVLATDLGS 666

Query: 120 TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG--D 177
              ++ A +N+S++++ND  P F   QY     HI   +   GS I  V A D D G   
Sbjct: 667 PPQSSMARINVSLLDMNDNSPVFYPVQY---FAHI-QENEPGGSYITTVSATDPDLGLNG 722

Query: 178 RVTLSLRGPYEKMFSIN-DSGHISI-VDLSALNTSTIQLVVVATDTGN--PPRQASV 230
            V  S+       F +N  SG IS  + L     +  QL +VATD GN   P QA V
Sbjct: 723 TVKYSISAGDRSRFQVNAQSGVISTRMALDREEKTAYQLQIVATDGGNLQSPNQAIV 779



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 51/178 (28%), Positives = 79/178 (44%), Gaps = 36/178 (20%)

Query: 89   FSISRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYP 145
            F++S  G++ + Q LD ET++ +   + ATD+    +T + T+N+ V +VND  P F   
Sbjct: 2276 FTLSASGELQVTQSLDRETKEHFVLMITATDSGSPALTGTGTINVIVDDVNDNVPTFASK 2335

Query: 146  QYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR---GPYEKMFSINDSGHISIV 202
             Y   +P     D   G+ +  V A+D D      +S R   G     F+IN S    I+
Sbjct: 2336 MYFTTIPE----DAPTGTDVLLVNASDADASTNAVISYRIIGG--NSQFTINPSTG-QII 2388

Query: 203  DLSALNTSTIQ---LVVVATDTG--------------------NPPRQASVPAIMHFP 237
              + L+  T +   LVVV++D G                    NPPR    P + H P
Sbjct: 2389 TSALLDRETKENYTLVVVSSDAGSPEPLSSSASVLVTVTDVNDNPPRFQHHPYVTHIP 2446



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 47/149 (31%), Positives = 71/149 (47%), Gaps = 12/149 (8%)

Query: 95   GDISLMQCLDYETEDSYRFTVYATDTL----MTTSATVNISVVNVNDWDPRFRYPQYELF 150
            G I     LD ET+++Y   V ++D      +++SA+V ++V +VND  PRF   Q+  +
Sbjct: 2385 GQIITSALLDRETKENYTLVVVSSDAGSPEPLSSSASVLVTVTDVNDNPPRF---QHHPY 2441

Query: 151  LPHIPLADLTPGSVIGKVEAADGDKGDRVTL--SLRGPYEKMFSINDSGHISIVDLSALN 208
            + HIP +   PGS +  V   D D G    L  SL G   + F I D    +I+    LN
Sbjct: 2442 VTHIP-SPTPPGSFVFAVTVTDADIGPNSELHYSLSGRNSEKFHI-DPLRGAIMAAGPLN 2499

Query: 209  -TSTIQLVVVATDTGNPPRQASVPAIMHF 236
              S +   V   D G+ P+  S    + F
Sbjct: 2500 GASEVTFSVHVKDGGSFPKTDSTTVTVRF 2528



 Score = 48.9 bits (115), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 48/160 (30%), Positives = 85/160 (53%), Gaps = 16/160 (10%)

Query: 76   RVKYWL-SNDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATD---TLMTTSATVNI 130
            +V+Y +   +  + F I S  G I++ + LD E   +Y  TV ATD      T ++TV+I
Sbjct: 2156 QVRYGIVDGNANQEFRIDSVTGAITVAKPLDREKTPTYSLTVQATDRGSNPRTDTSTVSI 2215

Query: 131  SVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPY 187
             ++++ND+ P F    Y + +P   L  L P +++ +V A D D+G    LS     G  
Sbjct: 2216 VLLDINDFVPMFELSPYSVNVPE-NLGTL-PRTIL-QVVARDDDQGPNSKLSYVLFGGNE 2272

Query: 188  EKMFSINDSGHISIVDLSALNTSTIQ---LVVVATDTGNP 224
            +  F+++ SG + +    +L+  T +   L++ ATD+G+P
Sbjct: 2273 DNAFTLSASGELQVT--QSLDRETKEHFVLMITATDSGSP 2310



 Score = 47.4 bits (111), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 52/192 (27%), Positives = 88/192 (45%), Gaps = 18/192 (9%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGERFSIS-RQGDISLM 100
            F  +EY  + LEN P    ++ +     +   +  + Y + +   + F I    G I+  
Sbjct: 3164 FFPDEYFPTVLENAPSGTTVIHLNATDADSGTNAVIAYTVQSSDSDLFVIDPNTGVITTQ 3223

Query: 101  QCLDYETEDSYRFTVYA---TDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLA 157
              LD+ET+ SY  TV A    D    + ATVNI +   N++ PRF    Y     +  ++
Sbjct: 3224 GFLDFETKQSYHLTVKAFNVPDEERCSFATVNIQLKGTNEYVPRFVSKLY-----YFEIS 3278

Query: 158  DLTP-GSVIGKVEAAD---GDKGDRVTLSLRGPYEKMFSIN-DSGHISIVD-LSALNTST 211
            +  P G+++G+V A+D   G  G+   L      +K F IN  +G I +   L       
Sbjct: 3279 EAAPKGTIVGEVFASDRDLGTDGEVHYLIFGNSRKKGFQINKKTGQIYVSGLLDREKEER 3338

Query: 212  IQLVVVATDTGN 223
            + L V+A ++G+
Sbjct: 3339 VSLKVLAKNSGS 3350



 Score = 43.1 bits (100), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 40/142 (28%), Positives = 73/142 (51%), Gaps = 14/142 (9%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLR----VKYWLSNDYGER-FSI-SRQGDI 97
            +FS++  S +  E+  +  ++ TV+  + RD      ++Y +S+   E  F+I S  G +
Sbjct: 3058 EFSQSHMSATIPESHSIGAIVRTVSA-RDRDAAMNGLIRYSISSGNEEGIFAINSSTGIL 3116

Query: 98   SLMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHI 154
            +L + LDYE    +  T+ ATD      T   +V ++V++VND  P F +P  + + P +
Sbjct: 3117 TLAKALDYELCQKHEMTITATDGGWVARTGYCSVTVNVIDVNDNSPVF-FP--DEYFPTV 3173

Query: 155  PLADLTPGSVIGKVEAADGDKG 176
             L +   G+ +  + A D D G
Sbjct: 3174 -LENAPSGTTVIHLNATDADSG 3194



 Score = 38.9 bits (89), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 31/108 (28%), Positives = 55/108 (50%), Gaps = 7/108 (6%)

Query: 89   FSISRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYP 145
            FS++  G +S  + +D E    +  +V   D+    M+++ TV+I+V++ ND   + R  
Sbjct: 3528 FSLNTAGVLSTTREIDREQIADFYLSVITRDSGVPQMSSTGTVHITVIDQNDNPSQSR-- 3585

Query: 146  QYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSI 193
              E+F+ +    +L PG ++G V+  D D  D    SL      +FSI
Sbjct: 3586 TVEIFVNY--YGNLFPGGILGSVKPQDPDVLDTFHCSLTSGVTSLFSI 3631


>gi|351701751|gb|EHB04670.1| Protocadherin Fat 4 [Heterocephalus glaber]
          Length = 4953

 Score = 74.3 bits (181), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 79/269 (29%), Positives = 124/269 (46%), Gaps = 42/269 (15%)

Query: 2    INEDD-----FLQPITLV---VRAIQYDNQDRYALATLIVSKAG--TSLRELQ------- 44
            +NEDD     FL P+T V    R + Y+ Q  Y L+       G  T++R          
Sbjct: 1879 VNEDDQDGIFFLNPVTGVFNLTRVLDYEAQQYYILSVRAEDGGGQFTTIRVYFNILDVND 1938

Query: 45   ----FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWL-SNDYGERFSISRQGD 96
                FS N YS S +ENLPV   +L        D    ++ Y + S D   +F++ + G 
Sbjct: 1939 NPPIFSLNSYSTSLMENLPVGSTVLLFNVTDADDGINSQLAYSIASGDSLTQFAVDKNGV 1998

Query: 97   ISLMQCLDYETEDSYRFTVYATD------TLMTTSATVNISVVNVNDWDPRFRYPQYELF 150
            + +++ LD E++  Y   V   D      +  T++A V+I +++VND  P F  P+    
Sbjct: 1999 LKVLKALDRESQSFYNLVVQVHDLPQVPASRFTSTAQVSIILLDVNDNPPTFLSPK---- 2054

Query: 151  LPHIPLADLTP-GSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIND-SGHISIV-DLS 205
            L +IP  + TP  +V+ K +A+D D G    +  +L  P    FSI    G + +  +L 
Sbjct: 2055 LTYIP--ENTPIDTVVFKAQASDPDSGPNSYIEYTLLNPLGNKFSIGTIDGEVRLTGELD 2112

Query: 206  ALNTSTIQLVVVATDTGNPPRQASVPAIM 234
                S   L+VVATD G P   +S   ++
Sbjct: 2113 REEVSNYTLMVVATDKGQPALSSSTEVVV 2141



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 59/191 (30%), Positives = 91/191 (47%), Gaps = 22/191 (11%)

Query: 50   YSVSALENLPVNYVLLTVTTNKPRDL---RVKYWLSNDYGERFSIS-RQGDISLMQCLDY 105
            +S    EN P+ Y++  VTT+   D+    +  +   D    F+I+   GDI + + L+ 
Sbjct: 2776 FSAHVPENSPLGYIVTRVTTSD-EDIGTNAISRYSITDMSLPFTINPSTGDIIISRPLNR 2834

Query: 106  ETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVI 165
            E  D YR  V A D+  T S  V I V ++ND  PRF  P Y L  P   L D+  GS +
Sbjct: 2835 EDTDRYRIRVSAHDSGWTVSTDVTIFVTDINDNAPRFSRPSYYLDCPE--LTDI--GSKV 2890

Query: 166  GKVEAADGDKGD--RVTLSLRGPYEKMFSIN-DSGHI---------SIVDLSALNTSTIQ 213
             +V A D D+G   ++   ++   E  F IN  +G I         ++   S +N +   
Sbjct: 2891 TQVYATDPDEGSNGQIFYFIKSQSE-YFRINATTGEIFNKQALKYQNVSGFSNVNINRHS 2949

Query: 214  LVVVATDTGNP 224
             +V ++D GNP
Sbjct: 2950 FIVTSSDRGNP 2960



 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 55/183 (30%), Positives = 90/183 (49%), Gaps = 16/183 (8%)

Query: 56   ENLPVNYVLLTVTTNKPR---DLRVKYWLSNDYGERFSISR-QGDISLMQCLDYETEDSY 111
            EN P++ V+     + P    +  ++Y L N  G +FSI    G++ L   LD E   +Y
Sbjct: 2060 ENTPIDTVVFKAQASDPDSGPNSYIEYTLLNPLGNKFSIGTIDGEVRLTGELDREEVSNY 2119

Query: 112  RFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKV 168
               V ATD     +++S  V + V+++ND +P F    Y++ +      D   G+ I +V
Sbjct: 2120 TLMVVATDKGQPALSSSTEVVVMVLDINDNNPVFAQALYKVEINE----DTLTGTDILQV 2175

Query: 169  EAADGDKGDRVTLS---LRGPYEKMFSIND-SGHISIVD-LSALNTSTIQLVVVATDTGN 223
             AADGD+G    +    + G   + F ++  +G I++V  L    T+T  L V A D G+
Sbjct: 2176 FAADGDEGTNGQVRYGIVDGSTNQEFRMDSVTGVITVVKPLDREKTATYLLTVQAADRGS 2235

Query: 224  PPR 226
             PR
Sbjct: 2236 TPR 2238



 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 47/157 (29%), Positives = 82/157 (52%), Gaps = 13/157 (8%)

Query: 88   RFSI-SRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFR 143
            +F+I S  G ++L+  LDYE   +Y   + A D+    + ++ T+NI +++ ND  P F 
Sbjct: 1256 QFAIGSTSGQVTLIGKLDYEATPAYFLVIQAVDSGTVSLNSTCTLNIDILDENDNTPCF- 1314

Query: 144  YPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTL--SLRGPY-EKMFSIN-DSGHI 199
             P+  LF+    L ++  G ++  V A D D GD   L  S+ G      FSI+ ++G I
Sbjct: 1315 -PKSTLFVD--VLENMRIGELVSSVTATDSDSGDNADLHYSITGSNNHGTFSISPNTGSI 1371

Query: 200  SIVDLSALNTSTI-QLVVVATDTGNPPRQASVPAIMH 235
             +       T ++ +L + A D G PPR +++  ++H
Sbjct: 1372 FLAKKLDFETQSLYKLNITAKDQGRPPRSSTMSVVIH 1408



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 58/190 (30%), Positives = 94/190 (49%), Gaps = 15/190 (7%)

Query: 56   ENLPVNYVLLTVTTNKPRDLRVKYWL-SNDYGERFSISR-QGDISLMQCLDYETEDSYRF 113
            EN PV  ++ T+T +  R   + Y++ S + G  F + +  G +S+ Q LD+E    Y  
Sbjct: 2577 ENQPVGTLVTTITGSSLRGEALSYYIASGNLGNTFQMDQLTGQVSISQPLDFEKIQKYLV 2636

Query: 114  TVYATDTL---MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEA 170
             + A D      ++   ++I+V++VND  P F+    + F+  I L +L+P  ++  V A
Sbjct: 2637 WIEARDGGFPPFSSYEKLDITVLDVNDNSPIFK---EDPFVSEI-LENLSPRKIL-TVSA 2691

Query: 171  ADGDKGDRVTLS---LRGPYEKMFSINDS-GHI-SIVDLSALNTSTIQLVVVATDTGNPP 225
             D D G    L    + G  E  FSIN + G I SI  L     S   L V ++D G+P 
Sbjct: 2692 MDKDSGPNGQLDYEIVHGNKENSFSINHATGEIRSIRPLDREKVSHYMLTVKSSDKGSPS 2751

Query: 226  RQASVPAIMH 235
            +  SV  I++
Sbjct: 2752 QSTSVKVIIN 2761



 Score = 55.8 bits (133), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 33/101 (32%), Positives = 49/101 (48%), Gaps = 5/101 (4%)

Query: 77   VKYWLSNDYGERFSIS-RQGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNV 135
            V Y + +   + F I    GD+   + LD E    Y   V A D L ++   +NI++ +V
Sbjct: 1774 VTYAIISGADDSFRIDPESGDLIATKRLDRERRSKYSLLVRADDGLQSSDMRINITISDV 1833

Query: 136  NDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG 176
            ND  P+F  P Y   +P     D TPGS++  + A D D G
Sbjct: 1834 NDHTPKFSRPVYSFDIPE----DTTPGSLVAAILATDDDSG 1870



 Score = 54.7 bits (130), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 51/178 (28%), Positives = 81/178 (45%), Gaps = 34/178 (19%)

Query: 87   ERFSISRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFR 143
            + F++S  G++ + Q LD ET++ +   + ATD+    +T + TVN+ V +VND  P F 
Sbjct: 2305 QAFTLSASGELRVTQSLDRETKEHFVLVITATDSGFPALTGTGTVNVIVDDVNDNVPTFA 2364

Query: 144  YPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDS-GHI--- 199
               Y   +P     D   G+ +  V A+D D      +S+ G     F+IN S G I   
Sbjct: 2365 SKMYFTTIPE----DAPTGTDVLLVNASDADASTNAVISIIGG-NSQFTINPSTGQIITS 2419

Query: 200  SIVDLSALNTSTIQLVVVATDTG--------------------NPPRQASVPAIMHFP 237
            +++D    +  T  L+VV++D G                    NPPR    P + H P
Sbjct: 2420 ALLDRETKDNYT--LIVVSSDAGSPESLSSSTSVLVTVTDVNDNPPRFQHHPYVTHIP 2475



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 57/198 (28%), Positives = 88/198 (44%), Gaps = 24/198 (12%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLS-NDYGERFSISRQGDISLM 100
            F +  Y V+  E+ PVN     V     +   +  + Y ++  + G+ F I   G + + 
Sbjct: 995  FDQLSYEVTLSESEPVNSRFFKVQASDEDSGANGEIAYTIAEGNAGDAFGIFPDGQLYIK 1054

Query: 101  QCLDYETEDSYRFTVYATDTLMTT-SATVNISVV--NVNDWDPRFRYPQYELFLPHIPLA 157
              LD E +D Y   V A+D  +   SATVN++V+  +VND  P F    Y  +      A
Sbjct: 1055 SELDRELQDRYVLVVVASDRAVEPLSATVNVTVILEDVNDNRPLFNSTNYTFYFEEEQRA 1114

Query: 158  DLTPGSVIGKVEAADGDKGD----RVTLSLRGPYEKMFSINDSGHISIV---DLSAL--- 207
                GS +GKV A D D G     R +  +  P  ++ +I  +G I+     D  +L   
Sbjct: 1115 ----GSFVGKVSAVDKDFGPNGEVRYSFEMVQPDFELHTI--TGEITSTHQFDRESLMRQ 1168

Query: 208  -NTSTIQLVVVATDTGNP 224
              T+     V+ATD G P
Sbjct: 1169 RGTAVFSFTVIATDQGLP 1186



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 51/193 (26%), Positives = 98/193 (50%), Gaps = 12/193 (6%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRDLR--VKYWLS-NDYGERFSISR-QGDISLM 100
           FS+  YS    EN+ + Y + +V+ +   DL   + Y ++  D    F+I++  G ++  
Sbjct: 792 FSQVAYSFVVFENVALGYHVGSVSAST-MDLHSNISYLITTGDQKGMFAINQVTGQLTTA 850

Query: 101 QCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLT 160
             +D E +  Y+  V A+   +T    VNI+V ++ND  P F      + +    + +  
Sbjct: 851 SVIDREEQSFYQLNVVASGGTVTGDTVVNITVKDLNDNSPHFLQAVESVNV----VENWQ 906

Query: 161 PGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIND-SGHISIVDLSALNTSTIQLVVV 217
            G  I + +A D D+G    V  SL+   + +F+IN+ +G+IS++    ++  + Q+ ++
Sbjct: 907 AGHSIFQAKAVDPDEGVNGMVLYSLKQNPKNLFAINEKNGNISLLGPLDVHAGSYQIEIL 966

Query: 218 ATDTGNPPRQASV 230
           A+D G P   +SV
Sbjct: 967 ASDMGVPQLSSSV 979



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 73/237 (30%), Positives = 104/237 (43%), Gaps = 22/237 (9%)

Query: 11  ITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNE-YSVSALENLPVNYVLLTVTT 69
           I L + A       + + A L+V+    +  +  FS+ E Y VS +EN P    LL +  
Sbjct: 547 IVLNISARDQGVHPKVSYAQLVVTLLDVNDEKPVFSQPEGYKVSVVENAPTGTELLVLGA 606

Query: 70  NKPRDL----RVKYWLSNDYGERFSISR---QGDISLMQCLDYETEDSYRFTVYATD--- 119
               DL     V++ L     ++ S       G +S +  LD E +  Y   V ATD   
Sbjct: 607 TD-GDLGDNGTVRFSLQEAESDQRSFRLDPVSGRLSTISSLDREEQAFYSLLVLATDLGT 665

Query: 120 TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRV 179
              ++ A +N+S++++ND  P F   QY     HI   +   GS I  V A D D G   
Sbjct: 666 PPQSSVAQINVSLLDMNDNSPVFYPVQY---FAHI-QENEPGGSYITTVSATDPDLGPNG 721

Query: 180 TL--SLRGPYEKMFSIN-DSGHISI-VDLSALNTSTIQLVVVATDTGN--PPRQASV 230
           T+  S+       F IN  SG IS  + L     +  QL +VATD GN   P QA V
Sbjct: 722 TVKYSISAGDRSRFQINAQSGVISTKMALDREEKTAYQLQIVATDGGNLQSPNQAIV 778



 Score = 48.5 bits (114), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 47/139 (33%), Positives = 75/139 (53%), Gaps = 14/139 (10%)

Query: 95   GDISLMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFL 151
            G I++++ LD E   +Y  TV A D   T  T ++TV+I ++++ND+ P F    Y   L
Sbjct: 2208 GVITVVKPLDREKTATYLLTVQAADRGSTPRTDTSTVSIVLLDMNDFVPTFELSPY---L 2264

Query: 152  PHIPLADLTPGSVIGKVEAADGDKGDRVTLS--LRGPYE-KMFSINDSGHISIVDLSALN 208
             ++P    T    I +V A D D+G    LS  LRG  E + F+++ SG + +    +L+
Sbjct: 2265 VNVPENLGTLPKTILQVVARDDDQGSNSKLSYVLRGGNEDQAFTLSASGELRVT--QSLD 2322

Query: 209  TSTIQ---LVVVATDTGNP 224
              T +   LV+ ATD+G P
Sbjct: 2323 RETKEHFVLVITATDSGFP 2341



 Score = 45.4 bits (106), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 42/140 (30%), Positives = 66/140 (47%), Gaps = 13/140 (9%)

Query: 45   FSKNEYSVSALENLP--VNYVLLTVTTNKP-RDLRVKYWLSNDYGERFSIS-RQGDISLM 100
            F  +EY  + LEN P     + L  T N    +  + Y + +   + F I    G I+  
Sbjct: 3193 FVPDEYFPTVLENAPSGTTVIHLNATDNDSGTNAVIAYTVQSSDSDLFVIDPNTGVITTQ 3252

Query: 101  QCLDYETEDSYRFTVYA---TDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLA 157
              LD+ET+ SY   V A    D    + ATVNI +   N++ PRF    Y     +  ++
Sbjct: 3253 GFLDFETKQSYHLIVKAFNVPDEERCSFATVNIQLKGTNEYVPRFVSKLY-----YFEIS 3307

Query: 158  DLTP-GSVIGKVEAADGDKG 176
            +  P G+++G+V A+D D G
Sbjct: 3308 EAAPKGTIVGEVFASDRDMG 3327



 Score = 41.6 bits (96), Expect = 0.64,   Method: Compositional matrix adjust.
 Identities = 48/186 (25%), Positives = 84/186 (45%), Gaps = 14/186 (7%)

Query: 6    DFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLL 65
            D  Q   + V A    N    + AT+ ++    +    +FS++  S +  E+  +  ++ 
Sbjct: 3049 DLNQNFLITVTAQDKGNPPLSSQATVQITVTEENYHTPEFSQSHMSTTIPESHSIGAIVR 3108

Query: 66   TVTTNKPRDLR----VKYWLSNDYGER-FSI-SRQGDISLMQCLDYETEDSYRFTVYATD 119
            TV+  + RD      + Y +S    E  F+I S  G ++L + LDYE    +  T+ ATD
Sbjct: 3109 TVSA-RDRDAAMNGLITYTISAGNEEGIFAINSSTGVLTLAKALDYELCQKHEITISATD 3167

Query: 120  ---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG 176
                  T   +V I+V++VND  P F   +Y    P + L +   G+ +  + A D D G
Sbjct: 3168 GGWVARTGYCSVTITVIDVNDNSPVFVPDEY---FPTV-LENAPSGTTVIHLNATDNDSG 3223

Query: 177  DRVTLS 182
                ++
Sbjct: 3224 TNAVIA 3229



 Score = 39.7 bits (91), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 47/149 (31%), Positives = 70/149 (46%), Gaps = 12/149 (8%)

Query: 95   GDISLMQCLDYETEDSYRFTVYATDT----LMTTSATVNISVVNVNDWDPRFRYPQYELF 150
            G I     LD ET+D+Y   V ++D      +++S +V ++V +VND  PRF   Q+  +
Sbjct: 2414 GQIITSALLDRETKDNYTLIVVSSDAGSPESLSSSTSVLVTVTDVNDNPPRF---QHHPY 2470

Query: 151  LPHIPLADLTPGSVIGKVEAADGDKGDRVTL--SLRGPYEKMFSINDSGHISIVDLSALN 208
            + HIP   L PGS +  V   D D G    L  SL G   + F I D    +I+    L+
Sbjct: 2471 VTHIPSPTL-PGSFVFAVTVTDADIGPNSELHYSLSGRNSEKFRI-DPLRGAIMAAGPLS 2528

Query: 209  -TSTIQLVVVATDTGNPPRQASVPAIMHF 236
              S +   V   D G+ P+  S    + F
Sbjct: 2529 GASEVTFSVHVKDGGSIPKTDSTTVTVRF 2557



 Score = 39.3 bits (90), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 31/108 (28%), Positives = 55/108 (50%), Gaps = 7/108 (6%)

Query: 89   FSISRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYP 145
            FS++  G +S  + +D E    +  +V   D+    M+++ TV+I+V++ ND   + R  
Sbjct: 3557 FSLNTAGVLSTTREIDREQIADFYLSVVTRDSGVPQMSSTGTVHITVIDQNDNPSQSR-- 3614

Query: 146  QYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSI 193
              E+F+ +    +L PG ++G V+  D D  D    SL      +FSI
Sbjct: 3615 TVEIFVNY--YGNLFPGGILGSVKPQDPDVLDSFHCSLTSGVTSLFSI 3660



 Score = 38.5 bits (88), Expect = 6.0,   Method: Compositional matrix adjust.
 Identities = 43/142 (30%), Positives = 69/142 (48%), Gaps = 20/142 (14%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVT-----TNKPRDLRVKYWLSNDYGERFSIS-RQGDIS 98
            F K+   V  LEN+ +  ++ +VT     +    DL      SN++G  FSIS   G I 
Sbjct: 1314 FPKSTLFVDVLENMRIGELVSSVTATDSDSGDNADLHYSITGSNNHG-TFSISPNTGSIF 1372

Query: 99   LMQCLDYETEDSYRFTVYATDTL---MTTSATVNISVVNVNDWDPRFRYPQYELF---LP 152
            L + LD+ET+  Y+  + A D      +++ +V I V + ND  P F  P  ++F   + 
Sbjct: 1373 LAKKLDFETQSLYKLNITAKDQGRPPRSSTMSVVIHVRDFNDNPPSF--PPGDIFKSIVE 1430

Query: 153  HIPLADLTPGSVIGKVEAADGD 174
            +IP+     G+ +  V A D D
Sbjct: 1431 NIPI-----GTSVISVTAHDPD 1447



 Score = 37.7 bits (86), Expect = 9.9,   Method: Compositional matrix adjust.
 Identities = 59/240 (24%), Positives = 103/240 (42%), Gaps = 25/240 (10%)

Query: 9    QPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVT 68
            Q   L+V+A    +++R + AT+ +   GT+    +F    Y     E  P   ++  V 
Sbjct: 3261 QSYHLIVKAFNVPDEERCSFATVNIQLKGTNEYVPRFVSKLYYFEISEAAPKGTIVGEVF 3320

Query: 69   TNKPRDL----RVKYWL-SNDYGERFSISRQ-GDISLMQCLDYETEDSYRFTVYATDTLM 122
             +  RD+     V Y +  N   + F I+++ G I +   LD E E+     V A +   
Sbjct: 3321 ASD-RDMGTDGEVHYLIFGNSRKKGFQINKKTGQIYVSGLLDREKEERVSLKVLAKNFGS 3379

Query: 123  TTSA-----TVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTP-GSVIGKVEAADGD-- 174
               A     TVN++V++ ND       P + L + ++ +++  P G+ +  V A D D  
Sbjct: 3380 IRGADIDEVTVNVTVLDANDP------PVFSLNIYNVQISEGVPIGTHVTFVSAFDSDSI 3433

Query: 175  -KGDRVTLSL-RGPYEKMFSIN-DSGHISI-VDLSALNTSTIQLVVVATDTGNPPRQASV 230
                R +  +  G     FS+N  +G I++  +L         L V+A D+G P    S 
Sbjct: 3434 PSWSRFSYFIGSGNENGAFSVNPQTGQITVTAELDRETLPIYNLTVLAVDSGIPSATGSA 3493


>gi|443683499|gb|ELT87727.1| hypothetical protein CAPTEDRAFT_220202 [Capitella teleta]
          Length = 842

 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 72/260 (27%), Positives = 118/260 (45%), Gaps = 28/260 (10%)

Query: 11  ITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTN 70
            +LVV+A Q D+ +RY+ + L +     +     F +++Y+ + +EN P+  ++ TV   
Sbjct: 341 FSLVVQATQKDDPNRYSRSLLRIYVQPANENVPHFEQDQYTSTLVENTPIGTIVTTVAAV 400

Query: 71  KPRDLRVKYWLSNDYGE--------------RFSISRQ-GDISLMQCLDYETEDSYRFTV 115
              +    Y++  + G               +F+I+++ G I+    L  + +D+Y  TV
Sbjct: 401 DNDEGCNSYFMKEEEGSQGTILFYNFETVHSKFTINKKSGVITTKDSLSIDYKDTYSLTV 460

Query: 116 YATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDK 175
             TD   T +  V ++V+     +P      Y+             G ++G V A DGD 
Sbjct: 461 TVTDGNNTDTTEVVVTVLKAETQNPVMSESSYQFD------GRTETGMILGSVSATDGDV 514

Query: 176 GDRVTLSLRGPYEKMFSIND-SGHISIV-DLSALNTSTIQLVVVATDTGNPPRQASVPAI 233
           G  +T SL      +FSIN  SG ISI  D   +N +   L V+ATD   PPR AS P  
Sbjct: 515 GSVITFSLVDT-SGLFSINPVSGEISITGDAMNINKNEYTLFVLATDNDAPPRTASAPVT 573

Query: 234 MHF----PEAIVQQASSKLN 249
           + F    P   VQ   ++ N
Sbjct: 574 VTFSDVTPGGSVQYTDTETN 593


>gi|355749557|gb|EHH53956.1| hypothetical protein EGM_14676 [Macaca fascicularis]
          Length = 4981

 Score = 73.6 bits (179), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 80/270 (29%), Positives = 121/270 (44%), Gaps = 44/270 (16%)

Query: 2    INEDD-----FLQPITLV---VRAIQYDNQDRYALATLIVSKAGTSLRELQ--------- 44
            +NEDD     FL PIT V    R + Y+ Q  Y L T+     G     ++         
Sbjct: 1880 VNEDDEDGIFFLNPITGVFNLTRVLDYEVQQYYIL-TVRAEDGGGQFTAIRVYFNILDVN 1938

Query: 45   -----FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWL-SNDYGERFSISRQG 95
                 FS N YS S +ENLPV   +L        D     + Y + S D   +F++ + G
Sbjct: 1939 DNPPIFSLNSYSTSLMENLPVGSTVLVFNVTDADDGINSELAYSIASGDSLGQFTVDKNG 1998

Query: 96   DISLMQCLDYETEDSYRFTVYATD------TLMTTSATVNISVVNVNDWDPRFRYPQYEL 149
             + +++ LD E++  Y   V   D      +  T++A V+I +++VND  P F  P+   
Sbjct: 1999 LLKVLKALDRESQSFYNLVVQVHDLPQIPASRFTSTAQVSIILLDVNDNPPTFLSPK--- 2055

Query: 150  FLPHIPLADLTP-GSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIND-SGHISIV-DL 204
             L +IP  + TP  +V+ K +A+D D G    +  +L  P    FSI    G + +  +L
Sbjct: 2056 -LTYIP--ENTPIDTVVFKAQASDPDSGPNSYIEYTLLNPLGNKFSIGTIDGEVRLTGEL 2112

Query: 205  SALNTSTIQLVVVATDTGNPPRQASVPAIM 234
                 S   L VVATD G P   +S   I+
Sbjct: 2113 DREEVSNYTLTVVATDKGQPSLSSSTEVIV 2142



 Score = 58.5 bits (140), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 61/192 (31%), Positives = 92/192 (47%), Gaps = 24/192 (12%)

Query: 50   YSVSALENLPVNYVLLTVTTNKPRDLRV----KYWLSNDYGERFSIS-RQGDISLMQCLD 104
            +S    EN P+ Y +  VTT+   D+ +    +Y +  D    F+I+   GDI + + L+
Sbjct: 2777 FSAHVPENSPLGYTVTRVTTSD-EDIGINAISRYSIM-DTSLPFTINPSTGDIVISRPLN 2834

Query: 105  YETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSV 164
             E  D YR  V A D+  T S  V I V +VND  PRF  P Y L  P   L ++  GS 
Sbjct: 2835 REDTDRYRIRVSAHDSGWTVSTDVTIFVTDVNDNAPRFSRPSYYLDCPE--LTEI--GSK 2890

Query: 165  IGKVEAADGDKGD--RVTLSLRGPYEKMFSIN-DSGHI---------SIVDLSALNTSTI 212
            + +V A D D+G   +V   ++   E  F IN  +G I         ++   S +N +  
Sbjct: 2891 VTQVFATDPDEGSNGQVFYFIKSQSE-YFRINATTGEIFNKQILKYQNVTGFSNVNINRH 2949

Query: 213  QLVVVATDTGNP 224
              +V ++D GNP
Sbjct: 2950 SFIVTSSDRGNP 2961



 Score = 58.2 bits (139), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 56/183 (30%), Positives = 89/183 (48%), Gaps = 16/183 (8%)

Query: 56   ENLPVNYVLLTVTTNKPR---DLRVKYWLSNDYGERFSISR-QGDISLMQCLDYETEDSY 111
            EN P++ V+     + P    +  ++Y L N  G +FSI    G++ L   LD E   +Y
Sbjct: 2061 ENTPIDTVVFKAQASDPDSGPNSYIEYTLLNPLGNKFSIGTIDGEVRLTGELDREEVSNY 2120

Query: 112  RFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKV 168
              TV ATD     +++S  V + V+++ND +P F    Y++ +    L     G+ I +V
Sbjct: 2121 TLTVVATDKGQPSLSSSTEVIVMVLDINDNNPIFAQALYKVEINENTLT----GTDIIQV 2176

Query: 169  EAADGDKGDRVTLS---LRGPYEKMFSIND-SGHISIVD-LSALNTSTIQLVVVATDTGN 223
             AADGD+G    +    + G   + F I+  +G I++   L    T T  L V A D G+
Sbjct: 2177 FAADGDEGTNGQVRYGIVNGNTNQEFRIDSVTGAITVAKPLDREKTPTYHLTVQAADRGS 2236

Query: 224  PPR 226
             PR
Sbjct: 2237 TPR 2239



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 44/149 (29%), Positives = 77/149 (51%), Gaps = 12/149 (8%)

Query: 95   GDISLMQCLDYETEDSYRFTVYATDTL---MTTSATVNISVVNVNDWDPRFRYPQYELFL 151
            G ++L+  LDYE   +Y   + A D+    + ++ T+NI +++ ND  P F  P+  LF+
Sbjct: 1265 GQVALIGKLDYEATPAYSLVIQAVDSGTIPLNSTCTLNIDILDENDNTPSF--PKSTLFV 1322

Query: 152  PHIPLADLTPGSVIGKVEAADGDKGDRVTL--SLRGPY-EKMFSIN-DSGHISIVDLSAL 207
                L ++  G ++  V A D D GD   L  S+ G      FSI+ ++G I +      
Sbjct: 1323 D--VLENMRIGELVSSVTATDSDSGDNADLYYSITGTNNHGTFSISPNTGSIFLAKKLDF 1380

Query: 208  NTSTI-QLVVVATDTGNPPRQASVPAIMH 235
             T ++ +L + A D G PPR +++  ++H
Sbjct: 1381 ETQSLYKLNITAKDQGRPPRSSTMSVVIH 1409



 Score = 54.3 bits (129), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 58/198 (29%), Positives = 88/198 (44%), Gaps = 24/198 (12%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLS-NDYGERFSISRQGDISLM 100
            F +  Y V+  E+ PVN     V     +   +  + Y ++  + G+ F I   G + + 
Sbjct: 996  FDQLSYEVTLSESEPVNSRFFKVQASDKDSGANGEIAYTIAEGNTGDAFGIFPDGQLYIK 1055

Query: 101  QCLDYETEDSYRFTVYATDTLMTT-SATVNISVV--NVNDWDPRFRYPQYELFLPHIPLA 157
              LD E +D Y   V A+D  +   SATVN++V+  +VND  P F    Y  +      A
Sbjct: 1056 SELDRELQDRYVLMVVASDRAVEPLSATVNVTVILEDVNDNRPLFNSTNYTFYFEEEQRA 1115

Query: 158  DLTPGSVIGKVEAADGDKGD----RVTLSLRGPYEKMFSINDSGHIS---IVDLSAL--- 207
                GS +GKV A D D G     R +  +  P  ++ +I  SG I+     D  +L   
Sbjct: 1116 ----GSFVGKVSAVDKDFGPNGEVRYSFEMVQPDFELHTI--SGEITNTYQFDRESLMRR 1169

Query: 208  -NTSTIQLVVVATDTGNP 224
              T+     V+ATD G P
Sbjct: 1170 RGTAVFSFTVIATDQGLP 1187



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/101 (32%), Positives = 48/101 (47%), Gaps = 5/101 (4%)

Query: 77   VKYWLSNDYGERFSIS-RQGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNV 135
            V Y + +   + F I    GD+   + LD E    Y   V A D L ++   +NI+V +V
Sbjct: 1775 VTYTIISGADDSFRIDPESGDLIATRRLDRERRSKYSLLVRADDGLQSSDMRINITVSDV 1834

Query: 136  NDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG 176
            ND  P+F  P Y   +P     D  PGS++  + A D D G
Sbjct: 1835 NDHTPKFSRPVYSFDIPE----DTIPGSLVAAILATDDDSG 1871



 Score = 51.2 bits (121), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 72/237 (30%), Positives = 104/237 (43%), Gaps = 22/237 (9%)

Query: 11  ITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNE-YSVSALENLPVNYVLLTVTT 69
           I L + A       + + A L+V+    +  + +FS+ E Y VS +EN P    LL +  
Sbjct: 548 IVLNISARDQGVHPKVSYAQLVVTLLDVNDEKPRFSQPEGYDVSVVENAPTGTELLMLRA 607

Query: 70  NKPRDL----RVKYWLSNDYGERFSISR---QGDISLMQCLDYETEDSYRFTVYATD--- 119
               DL     V++ L     +R S       G +S +  LD E +  Y   V ATD   
Sbjct: 608 TD-GDLGDNGTVRFSLQEAETDRRSFRLDPVSGRLSTISSLDREEQAFYSLLVLATDLGS 666

Query: 120 TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRV 179
              ++   +N+S++++ND  P F   QY     HI   +   GS I  V A D D G   
Sbjct: 667 PPQSSMTRINVSLLDINDNSPVFYPVQY---FAHIK-ENEPGGSYITTVSATDPDLGTNG 722

Query: 180 TL--SLRGPYEKMFSIN-DSGHISI-VDLSALNTSTIQLVVVATDTGN--PPRQASV 230
           T+  S+       F +N  SG IS  + L     +  QL +VATD GN   P QA V
Sbjct: 723 TVKYSISAGDRSRFQVNVQSGVISTRMALDREEKTAYQLQIVATDGGNLQSPNQAIV 779



 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 48/149 (32%), Positives = 69/149 (46%), Gaps = 12/149 (8%)

Query: 95   GDISLMQCLDYETEDSYRFTVYATDTL----MTTSATVNISVVNVNDWDPRFRYPQYELF 150
            G I     LD ET+D+Y   V  +D      +++S +V ++V +VND  PRF   Q+  +
Sbjct: 2415 GQIITSALLDRETKDNYTLVVVCSDAGYPEPLSSSTSVLVTVTDVNDNPPRF---QHHPY 2471

Query: 151  LPHIPLADLTPGSVIGKVEAADGDKGDRVTL--SLRGPYEKMFSINDSGHISIVDLSALN 208
            + HIP   L PGS +  V   D D G    L  SL G   + F I D    +I+    LN
Sbjct: 2472 VTHIPSPTL-PGSFVFAVTVTDADIGPNSELHYSLSGRNSEKFHI-DPLRGAIMAAGPLN 2529

Query: 209  -TSTIQLVVVATDTGNPPRQASVPAIMHF 236
              S +   V   D G+ P+  S    + F
Sbjct: 2530 GASEVTFSVHVKDGGSFPKTDSTTVTVRF 2558



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 49/176 (27%), Positives = 76/176 (43%), Gaps = 34/176 (19%)

Query: 89   FSISRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYP 145
            F++S  G++ + Q LD ET++ +   + A D     +T + T+N+ V +VND  P F   
Sbjct: 2308 FTLSASGELGVTQSLDRETKEQFVLMITAVDGGSPALTGTGTINVIVDDVNDNVPTFASK 2367

Query: 146  QYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDS-GHI---SI 201
             Y   +P     D   G+ +  V A+D D      + + G     F+IN S G I   ++
Sbjct: 2368 AYFTTIPE----DAPTGTDVLLVNASDADASTNAVVRIIGG-NSQFTINPSTGQIITSAL 2422

Query: 202  VDLSALNTSTIQLVVVATDTG--------------------NPPRQASVPAIMHFP 237
            +D    +  T  LVVV +D G                    NPPR    P + H P
Sbjct: 2423 LDRETKDNYT--LVVVCSDAGYPEPLSSSTSVLVTVTDVNDNPPRFQHHPYVTHIP 2476



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 53/197 (26%), Positives = 94/197 (47%), Gaps = 20/197 (10%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRDLR--VKYWLS-NDYGERFSISR-QGDISLM 100
           F +  YS    EN+ + Y + +V+ +   DL   + Y ++  D    F+I++  G ++  
Sbjct: 793 FGQVAYSFVVFENVALGYHVGSVSAST-MDLNSNISYLITTGDQKGMFAINQVTGQLTTA 851

Query: 101 QCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLT 160
             +D E +  Y+  V A+   +T    VNI+V ++ND  P         FL  I   D+ 
Sbjct: 852 NVIDREEQSFYQLKVVASGGTVTGDTMVNITVKDLNDNSPH--------FLQAIESVDVV 903

Query: 161 ----PGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIN-DSGHISIVDLSALNTSTIQ 213
                G  I + +A D D+G    V  SL+   + +F+IN  +G IS++    +   + Q
Sbjct: 904 ENWQAGHSIFQAKAVDPDEGVNGMVLYSLKQNPKNLFAINGKNGTISLLGPLDVQAGSYQ 963

Query: 214 LVVVATDTGNPPRQASV 230
           + ++A+D G P   +SV
Sbjct: 964 IEILASDMGVPQLSSSV 980



 Score = 44.3 bits (103), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 43/161 (26%), Positives = 74/161 (45%), Gaps = 16/161 (9%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGERFSIS-RQGDISLM 100
            F  ++Y  + LEN P    ++ +     +   +  + Y + +   + F I    G I+  
Sbjct: 3194 FLSDDYFPTVLENAPSGTTVIHLNATDADSGTNAVIAYTVQSSDSDLFVIDPNTGVITTQ 3253

Query: 101  QCLDYETEDSYRFTVYA---TDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLA 157
              LD+ET+ SY  TV A    D    + ATVN+ +   N++ PRF    Y     +  ++
Sbjct: 3254 GFLDFETKQSYHLTVKAFNVPDEERCSFATVNVQLKGTNEYVPRFVSKLY-----YFEIS 3308

Query: 158  DLTP-GSVIGKVEAAD---GDKGDRVTLSLRGPYEKMFSIN 194
            +  P G+++G+V A+D   G  G+   L      +K F IN
Sbjct: 3309 EAAPKGTIVGEVFASDRDLGTDGEVHYLIFGNSRKKGFQIN 3349



 Score = 40.0 bits (92), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 55/108 (50%), Gaps = 7/108 (6%)

Query: 89   FSISRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYP 145
            FS+S  G +S  + +D E    +  +V   D+    M+++ TV+I+V++ ND   + R  
Sbjct: 3558 FSLSTVGVLSTTREIDREQIADFYLSVVTKDSGVPQMSSTGTVHITVIDQNDNPSQSR-- 3615

Query: 146  QYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSI 193
              E+F+ +    +L PG ++G V+  D D  D    SL      +FSI
Sbjct: 3616 TVEIFVNY--YGNLFPGGILGSVKPQDPDVLDSFHCSLTSGVTSLFSI 3661


>gi|297293338|ref|XP_002804233.1| PREDICTED: protocadherin Fat 4-like isoform 2 [Macaca mulatta]
          Length = 4981

 Score = 73.6 bits (179), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 80/270 (29%), Positives = 121/270 (44%), Gaps = 44/270 (16%)

Query: 2    INEDD-----FLQPITLV---VRAIQYDNQDRYALATLIVSKAGTSLRELQ--------- 44
            +NEDD     FL PIT V    R + Y+ Q  Y L T+     G     ++         
Sbjct: 1880 VNEDDEDGIFFLNPITGVFNLTRVLDYEVQQYYIL-TVRAEDGGGQFTAIRVYFNILDVN 1938

Query: 45   -----FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWL-SNDYGERFSISRQG 95
                 FS N YS S +ENLPV   +L        D     + Y + S D   +F++ + G
Sbjct: 1939 DNPPIFSLNSYSTSLMENLPVGSTVLVFNVTDADDGINSELAYSIASGDSLGQFTVDKNG 1998

Query: 96   DISLMQCLDYETEDSYRFTVYATD------TLMTTSATVNISVVNVNDWDPRFRYPQYEL 149
             + +++ LD E++  Y   V   D      +  T++A V+I +++VND  P F  P+   
Sbjct: 1999 LLKVLKALDRESQSFYNLVVQVHDLPQIPASRFTSTAQVSIILLDVNDNPPTFLSPK--- 2055

Query: 150  FLPHIPLADLTP-GSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIND-SGHISIV-DL 204
             L +IP  + TP  +V+ K +A+D D G    +  +L  P    FSI    G + +  +L
Sbjct: 2056 -LTYIP--ENTPIDTVVFKAQASDPDSGPNSYIEYTLLNPLGNKFSIGTIDGEVRLTGEL 2112

Query: 205  SALNTSTIQLVVVATDTGNPPRQASVPAIM 234
                 S   L VVATD G P   +S   I+
Sbjct: 2113 DREEVSNYTLTVVATDKGQPSLSSSTEVIV 2142



 Score = 58.5 bits (140), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 61/192 (31%), Positives = 92/192 (47%), Gaps = 24/192 (12%)

Query: 50   YSVSALENLPVNYVLLTVTTNKPRDLRV----KYWLSNDYGERFSIS-RQGDISLMQCLD 104
            +S    EN P+ Y +  VTT+   D+ +    +Y +  D    F+I+   GDI + + L+
Sbjct: 2777 FSAHVPENSPLGYTVTRVTTSD-EDIGINAISRYSIM-DTSLPFTINPSTGDIVISRPLN 2834

Query: 105  YETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSV 164
             E  D YR  V A D+  T S  V I V +VND  PRF  P Y L  P   L ++  GS 
Sbjct: 2835 REDTDRYRIRVSAHDSGWTVSTDVTIFVTDVNDNAPRFSRPSYYLDCPE--LTEI--GSK 2890

Query: 165  IGKVEAADGDKGD--RVTLSLRGPYEKMFSIN-DSGHI---------SIVDLSALNTSTI 212
            + +V A D D+G   +V   ++   E  F IN  +G I         ++   S +N +  
Sbjct: 2891 VTQVFATDPDEGSNGQVFYFIKSQSE-YFRINATTGEIFNKQILKYQNVTGFSNVNINRH 2949

Query: 213  QLVVVATDTGNP 224
              +V ++D GNP
Sbjct: 2950 SFIVTSSDRGNP 2961



 Score = 58.2 bits (139), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 56/183 (30%), Positives = 89/183 (48%), Gaps = 16/183 (8%)

Query: 56   ENLPVNYVLLTVTTNKPR---DLRVKYWLSNDYGERFSISR-QGDISLMQCLDYETEDSY 111
            EN P++ V+     + P    +  ++Y L N  G +FSI    G++ L   LD E   +Y
Sbjct: 2061 ENTPIDTVVFKAQASDPDSGPNSYIEYTLLNPLGNKFSIGTIDGEVRLTGELDREEVSNY 2120

Query: 112  RFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKV 168
              TV ATD     +++S  V + V+++ND +P F    Y++ +    L     G+ I +V
Sbjct: 2121 TLTVVATDKGQPSLSSSTEVIVMVLDINDNNPIFAQALYKVEINENTLT----GTDIIQV 2176

Query: 169  EAADGDKGDRVTLS---LRGPYEKMFSIND-SGHISIVD-LSALNTSTIQLVVVATDTGN 223
             AADGD+G    +    + G   + F I+  +G I++   L    T T  L V A D G+
Sbjct: 2177 FAADGDEGTNGQVRYGIVNGNTNQEFRIDSVTGAITVAKPLDREKTPTYHLTVQAADRGS 2236

Query: 224  PPR 226
             PR
Sbjct: 2237 TPR 2239



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 44/149 (29%), Positives = 77/149 (51%), Gaps = 12/149 (8%)

Query: 95   GDISLMQCLDYETEDSYRFTVYATDTL---MTTSATVNISVVNVNDWDPRFRYPQYELFL 151
            G ++L+  LDYE   +Y   + A D+    + ++ T+NI +++ ND  P F  P+  LF+
Sbjct: 1265 GQVALIGKLDYEATPAYSLVIQAVDSGTIPLNSTCTLNIDILDENDNTPSF--PKSTLFV 1322

Query: 152  PHIPLADLTPGSVIGKVEAADGDKGDRVTL--SLRGPY-EKMFSIN-DSGHISIVDLSAL 207
                L ++  G ++  V A D D GD   L  S+ G      FSI+ ++G I +      
Sbjct: 1323 D--VLENMRIGELVSSVTATDSDSGDNADLYYSITGTNNHGTFSISPNTGSIFLAKKLDF 1380

Query: 208  NTSTI-QLVVVATDTGNPPRQASVPAIMH 235
             T ++ +L + A D G PPR +++  ++H
Sbjct: 1381 ETQSLYKLNITAKDQGRPPRSSTMSVVIH 1409



 Score = 54.7 bits (130), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 33/101 (32%), Positives = 48/101 (47%), Gaps = 5/101 (4%)

Query: 77   VKYWLSNDYGERFSIS-RQGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNV 135
            V Y + +   + F I    GD+   + LD E    Y   V A D L ++   +NI+V +V
Sbjct: 1775 VTYTIISGADDSFRIDPESGDLIATRRLDRERRSKYSLLVRADDGLQSSDMRINITVSDV 1834

Query: 136  NDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG 176
            ND  P+F  P Y   +P     D  PGS++  + A D D G
Sbjct: 1835 NDHTPKFSRPMYSFDIPE----DTIPGSLVAAILATDDDSG 1871



 Score = 54.3 bits (129), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 58/198 (29%), Positives = 88/198 (44%), Gaps = 24/198 (12%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLS-NDYGERFSISRQGDISLM 100
            F +  Y V+  E+ PVN     V     +   +  + Y ++  + G+ F I   G + + 
Sbjct: 996  FDQLSYEVTLSESEPVNSRFFKVQASDKDSGANGEIAYTIAEGNTGDAFGIFPDGQLYIK 1055

Query: 101  QCLDYETEDSYRFTVYATDTLMTT-SATVNISVV--NVNDWDPRFRYPQYELFLPHIPLA 157
              LD E +D Y   V A+D  +   SATVN++V+  +VND  P F    Y  +      A
Sbjct: 1056 SELDRELQDRYVLMVVASDRAVEPLSATVNVTVILEDVNDNRPLFNSTNYTFYFEEEQRA 1115

Query: 158  DLTPGSVIGKVEAADGDKGD----RVTLSLRGPYEKMFSINDSGHIS---IVDLSAL--- 207
                GS +GKV A D D G     R +  +  P  ++ +I  SG I+     D  +L   
Sbjct: 1116 ----GSFVGKVSAVDKDFGPNGEVRYSFEMVQPDFELHTI--SGEITNTYQFDRESLMRR 1169

Query: 208  -NTSTIQLVVVATDTGNP 224
              T+     V+ATD G P
Sbjct: 1170 RGTAVFSFTVIATDQGLP 1187



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 50/176 (28%), Positives = 78/176 (44%), Gaps = 34/176 (19%)

Query: 89   FSISRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYP 145
            F++S  G++ + Q LD ET++ +   + ATD+    +T + T+N+ V +VND  P F   
Sbjct: 2308 FTLSASGELGVTQSLDRETKEQFVLMITATDSGSPALTGTGTINVIVDDVNDNVPTFASK 2367

Query: 146  QYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDS-GHI---SI 201
             Y   +P     D   G+ +  V A+D D      + + G     F+IN S G I   ++
Sbjct: 2368 AYFTTIPE----DAPTGTDVLLVNASDADASTNAVVRIIGG-NSQFTINPSTGQIITSAL 2422

Query: 202  VDLSALNTSTIQLVVVATDTG--------------------NPPRQASVPAIMHFP 237
            +D    +  T  LVVV +D G                    NPPR    P + H P
Sbjct: 2423 LDRETKDNYT--LVVVCSDAGYPEPLSSSTSVLVTVTDVNDNPPRFQHHPYVTHIP 2476



 Score = 51.2 bits (121), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 72/237 (30%), Positives = 104/237 (43%), Gaps = 22/237 (9%)

Query: 11  ITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNE-YSVSALENLPVNYVLLTVTT 69
           I L + A       + + A L+V+    +  + +FS+ E Y VS +EN P    LL +  
Sbjct: 548 IVLNISARDQGVHPKVSYAQLVVTLLDVNDEKPRFSQPEGYDVSVVENAPTGTELLMLRA 607

Query: 70  NKPRDL----RVKYWLSNDYGERFSISR---QGDISLMQCLDYETEDSYRFTVYATD--- 119
               DL     V++ L     +R S       G +S +  LD E +  Y   V ATD   
Sbjct: 608 TD-GDLGDNGTVRFSLQEAETDRRSFRLDPVSGRLSTISSLDREEQAFYSLLVLATDLGS 666

Query: 120 TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRV 179
              ++   +N+S++++ND  P F   QY     HI   +   GS I  V A D D G   
Sbjct: 667 PPQSSMTRINVSLLDINDNSPVFYPVQY---FAHIK-ENEPGGSYITTVSATDPDLGTNG 722

Query: 180 TL--SLRGPYEKMFSIN-DSGHISI-VDLSALNTSTIQLVVVATDTGN--PPRQASV 230
           T+  S+       F +N  SG IS  + L     +  QL +VATD GN   P QA V
Sbjct: 723 TVKYSISAGDRSRFQVNVQSGVISTRMALDREEKTAYQLQIVATDGGNLQSPNQAIV 779



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 50/193 (25%), Positives = 94/193 (48%), Gaps = 12/193 (6%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRDLR--VKYWLS-NDYGERFSISR-QGDISLM 100
           F +  YS    EN+ + Y + +V+ +   DL   + Y ++  D    F+I++  G ++  
Sbjct: 793 FGQVAYSFVVFENVALGYHVGSVSAST-MDLNSNISYLITTGDQKGMFAINQVTGQLTTA 851

Query: 101 QCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLT 160
             +D E +  Y+  V A+   +T    VNI+V ++ND  P F      + +    + +  
Sbjct: 852 NVIDREEQSFYQLKVVASGGTVTGDTMVNITVKDLNDNSPHFLQAIESVNV----VENWQ 907

Query: 161 PGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIN-DSGHISIVDLSALNTSTIQLVVV 217
            G  I + +A D D+G    V  SL+   + +F+IN  +G IS++    +   + Q+ ++
Sbjct: 908 AGHSIFQAKAVDPDEGVNGMVLYSLKQNPKNLFAINGKNGTISLLGPLDVQAGSYQIEIL 967

Query: 218 ATDTGNPPRQASV 230
           A+D G P   +SV
Sbjct: 968 ASDMGVPQLSSSV 980



 Score = 43.5 bits (101), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 42/161 (26%), Positives = 74/161 (45%), Gaps = 16/161 (9%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGERFSIS-RQGDISLM 100
            F  ++Y  + LEN P    ++ +     +   +  + Y + +   + F +    G I+  
Sbjct: 3194 FLSDDYFPTVLENAPSGTTVIHLNATDADSGTNAVIAYTVQSSDSDLFVVDPNTGVITTQ 3253

Query: 101  QCLDYETEDSYRFTVYA---TDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLA 157
              LD+ET+ SY  TV A    D    + ATVN+ +   N++ PRF    Y     +  ++
Sbjct: 3254 GFLDFETKQSYHLTVKAFNVPDEERCSFATVNVQLKGTNEYVPRFVSKLY-----YFEIS 3308

Query: 158  DLTP-GSVIGKVEAAD---GDKGDRVTLSLRGPYEKMFSIN 194
            +  P G+++G+V A+D   G  G+   L      +K F IN
Sbjct: 3309 EAAPKGTIVGEVFASDRDLGTDGEVHYLIFGNSRKKGFQIN 3349



 Score = 39.7 bits (91), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 55/108 (50%), Gaps = 7/108 (6%)

Query: 89   FSISRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYP 145
            FS+S  G +S  + +D E    +  +V   D+    M+++ TV+I+V++ ND   + R  
Sbjct: 3558 FSLSTVGVLSTTREIDREQIADFYLSVVTKDSGVPQMSSTGTVHITVIDQNDNPSQSR-- 3615

Query: 146  QYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSI 193
              E+F+ +    +L PG ++G V+  D D  D    SL      +FSI
Sbjct: 3616 TVEIFVNY--YGNLFPGGILGSVKPQDPDVLDSFHCSLTSGVTSLFSI 3661


>gi|297293336|ref|XP_002804232.1| PREDICTED: protocadherin Fat 4-like isoform 1 [Macaca mulatta]
          Length = 4981

 Score = 73.6 bits (179), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 80/270 (29%), Positives = 121/270 (44%), Gaps = 44/270 (16%)

Query: 2    INEDD-----FLQPITLV---VRAIQYDNQDRYALATLIVSKAGTSLRELQ--------- 44
            +NEDD     FL PIT V    R + Y+ Q  Y L T+     G     ++         
Sbjct: 1880 VNEDDEDGIFFLNPITGVFNLTRVLDYEVQQYYIL-TVRAEDGGGQFTAIRVYFNILDVN 1938

Query: 45   -----FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWL-SNDYGERFSISRQG 95
                 FS N YS S +ENLPV   +L        D     + Y + S D   +F++ + G
Sbjct: 1939 DNPPIFSLNSYSTSLMENLPVGSTVLVFNVTDADDGINSELAYSIASGDSLGQFTVDKNG 1998

Query: 96   DISLMQCLDYETEDSYRFTVYATD------TLMTTSATVNISVVNVNDWDPRFRYPQYEL 149
             + +++ LD E++  Y   V   D      +  T++A V+I +++VND  P F  P+   
Sbjct: 1999 LLKVLKALDRESQSFYNLVVQVHDLPQIPASRFTSTAQVSIILLDVNDNPPTFLSPK--- 2055

Query: 150  FLPHIPLADLTP-GSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIND-SGHISIV-DL 204
             L +IP  + TP  +V+ K +A+D D G    +  +L  P    FSI    G + +  +L
Sbjct: 2056 -LTYIP--ENTPIDTVVFKAQASDPDSGPNSYIEYTLLNPLGNKFSIGTIDGEVRLTGEL 2112

Query: 205  SALNTSTIQLVVVATDTGNPPRQASVPAIM 234
                 S   L VVATD G P   +S   I+
Sbjct: 2113 DREEVSNYTLTVVATDKGQPSLSSSTEVIV 2142



 Score = 58.5 bits (140), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 61/192 (31%), Positives = 92/192 (47%), Gaps = 24/192 (12%)

Query: 50   YSVSALENLPVNYVLLTVTTNKPRDLRV----KYWLSNDYGERFSIS-RQGDISLMQCLD 104
            +S    EN P+ Y +  VTT+   D+ +    +Y +  D    F+I+   GDI + + L+
Sbjct: 2777 FSAHVPENSPLGYTVTRVTTSD-EDIGINAISRYSIM-DTSLPFTINPSTGDIVISRPLN 2834

Query: 105  YETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSV 164
             E  D YR  V A D+  T S  V I V +VND  PRF  P Y L  P   L ++  GS 
Sbjct: 2835 REDTDRYRIRVSAHDSGWTVSTDVTIFVTDVNDNAPRFSRPSYYLDCPE--LTEI--GSK 2890

Query: 165  IGKVEAADGDKGD--RVTLSLRGPYEKMFSIN-DSGHI---------SIVDLSALNTSTI 212
            + +V A D D+G   +V   ++   E  F IN  +G I         ++   S +N +  
Sbjct: 2891 VTQVFATDPDEGSNGQVFYFIKSQSE-YFRINATTGEIFNKQILKYQNVTGFSNVNINRH 2949

Query: 213  QLVVVATDTGNP 224
              +V ++D GNP
Sbjct: 2950 SFIVTSSDRGNP 2961



 Score = 58.2 bits (139), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 56/183 (30%), Positives = 89/183 (48%), Gaps = 16/183 (8%)

Query: 56   ENLPVNYVLLTVTTNKPR---DLRVKYWLSNDYGERFSISR-QGDISLMQCLDYETEDSY 111
            EN P++ V+     + P    +  ++Y L N  G +FSI    G++ L   LD E   +Y
Sbjct: 2061 ENTPIDTVVFKAQASDPDSGPNSYIEYTLLNPLGNKFSIGTIDGEVRLTGELDREEVSNY 2120

Query: 112  RFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKV 168
              TV ATD     +++S  V + V+++ND +P F    Y++ +    L     G+ I +V
Sbjct: 2121 TLTVVATDKGQPSLSSSTEVIVMVLDINDNNPIFAQALYKVEINENTLT----GTDIIQV 2176

Query: 169  EAADGDKGDRVTLS---LRGPYEKMFSIND-SGHISIVD-LSALNTSTIQLVVVATDTGN 223
             AADGD+G    +    + G   + F I+  +G I++   L    T T  L V A D G+
Sbjct: 2177 FAADGDEGTNGQVRYGIVNGNTNQEFRIDSVTGAITVAKPLDREKTPTYHLTVQAADRGS 2236

Query: 224  PPR 226
             PR
Sbjct: 2237 TPR 2239



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 44/149 (29%), Positives = 77/149 (51%), Gaps = 12/149 (8%)

Query: 95   GDISLMQCLDYETEDSYRFTVYATDTL---MTTSATVNISVVNVNDWDPRFRYPQYELFL 151
            G ++L+  LDYE   +Y   + A D+    + ++ T+NI +++ ND  P F  P+  LF+
Sbjct: 1265 GQVALIGKLDYEATPAYSLVIQAVDSGTIPLNSTCTLNIDILDENDNTPSF--PKSTLFV 1322

Query: 152  PHIPLADLTPGSVIGKVEAADGDKGDRVTL--SLRGPY-EKMFSIN-DSGHISIVDLSAL 207
                L ++  G ++  V A D D GD   L  S+ G      FSI+ ++G I +      
Sbjct: 1323 D--VLENMRIGELVSSVTATDSDSGDNADLYYSITGTNNHGTFSISPNTGSIFLAKKLDF 1380

Query: 208  NTSTI-QLVVVATDTGNPPRQASVPAIMH 235
             T ++ +L + A D G PPR +++  ++H
Sbjct: 1381 ETQSLYKLNITAKDQGRPPRSSTMSVVIH 1409



 Score = 54.7 bits (130), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 33/101 (32%), Positives = 48/101 (47%), Gaps = 5/101 (4%)

Query: 77   VKYWLSNDYGERFSIS-RQGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNV 135
            V Y + +   + F I    GD+   + LD E    Y   V A D L ++   +NI+V +V
Sbjct: 1775 VTYTIISGADDSFRIDPESGDLIATRRLDRERRSKYSLLVRADDGLQSSDMRINITVSDV 1834

Query: 136  NDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG 176
            ND  P+F  P Y   +P     D  PGS++  + A D D G
Sbjct: 1835 NDHTPKFSRPMYSFDIPE----DTIPGSLVAAILATDDDSG 1871



 Score = 54.3 bits (129), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 58/198 (29%), Positives = 88/198 (44%), Gaps = 24/198 (12%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLS-NDYGERFSISRQGDISLM 100
            F +  Y V+  E+ PVN     V     +   +  + Y ++  + G+ F I   G + + 
Sbjct: 996  FDQLSYEVTLSESEPVNSRFFKVQASDKDSGANGEIAYTIAEGNTGDAFGIFPDGQLYIK 1055

Query: 101  QCLDYETEDSYRFTVYATDTLMTT-SATVNISVV--NVNDWDPRFRYPQYELFLPHIPLA 157
              LD E +D Y   V A+D  +   SATVN++V+  +VND  P F    Y  +      A
Sbjct: 1056 SELDRELQDRYVLMVVASDRAVEPLSATVNVTVILEDVNDNRPLFNSTNYTFYFEEEQRA 1115

Query: 158  DLTPGSVIGKVEAADGDKGD----RVTLSLRGPYEKMFSINDSGHIS---IVDLSAL--- 207
                GS +GKV A D D G     R +  +  P  ++ +I  SG I+     D  +L   
Sbjct: 1116 ----GSFVGKVSAVDKDFGPNGEVRYSFEMVQPDFELHTI--SGEITNTYQFDRESLMRR 1169

Query: 208  -NTSTIQLVVVATDTGNP 224
              T+     V+ATD G P
Sbjct: 1170 RGTAVFSFTVIATDQGLP 1187



 Score = 51.2 bits (121), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 72/237 (30%), Positives = 104/237 (43%), Gaps = 22/237 (9%)

Query: 11  ITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNE-YSVSALENLPVNYVLLTVTT 69
           I L + A       + + A L+V+    +  + +FS+ E Y VS +EN P    LL +  
Sbjct: 548 IVLNISARDQGVHPKVSYAQLVVTLLDVNDEKPRFSQPEGYDVSVVENAPTGTELLMLRA 607

Query: 70  NKPRDL----RVKYWLSNDYGERFSISR---QGDISLMQCLDYETEDSYRFTVYATD--- 119
               DL     V++ L     +R S       G +S +  LD E +  Y   V ATD   
Sbjct: 608 TD-GDLGDNGTVRFSLQEAETDRRSFRLDPVSGRLSTISSLDREEQAFYSLLVLATDLGS 666

Query: 120 TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRV 179
              ++   +N+S++++ND  P F   QY     HI   +   GS I  V A D D G   
Sbjct: 667 PPQSSMTRINVSLLDINDNSPVFYPVQY---FAHIK-ENEPGGSYITTVSATDPDLGTNG 722

Query: 180 TL--SLRGPYEKMFSIN-DSGHISI-VDLSALNTSTIQLVVVATDTGN--PPRQASV 230
           T+  S+       F +N  SG IS  + L     +  QL +VATD GN   P QA V
Sbjct: 723 TVKYSISAGDRSRFQVNVQSGVISTRMALDREEKTAYQLQIVATDGGNLQSPNQAIV 779



 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 48/149 (32%), Positives = 69/149 (46%), Gaps = 12/149 (8%)

Query: 95   GDISLMQCLDYETEDSYRFTVYATDTL----MTTSATVNISVVNVNDWDPRFRYPQYELF 150
            G I     LD ET+D+Y   V  +D      +++S +V ++V +VND  PRF   Q+  +
Sbjct: 2415 GQIITSALLDRETKDNYTLVVVCSDAGYPEPLSSSTSVLVTVTDVNDNPPRF---QHHPY 2471

Query: 151  LPHIPLADLTPGSVIGKVEAADGDKGDRVTL--SLRGPYEKMFSINDSGHISIVDLSALN 208
            + HIP   L PGS +  V   D D G    L  SL G   + F I D    +I+    LN
Sbjct: 2472 VTHIPSPTL-PGSFVFAVTVTDADIGPNSELHYSLSGRNSEKFHI-DPLRGAIMAAGPLN 2529

Query: 209  -TSTIQLVVVATDTGNPPRQASVPAIMHF 236
              S +   V   D G+ P+  S    + F
Sbjct: 2530 GASEVTFSVHVKDGGSFPKTDSTTVTVRF 2558



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 49/176 (27%), Positives = 76/176 (43%), Gaps = 34/176 (19%)

Query: 89   FSISRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYP 145
            F++S  G++ + Q LD ET++ +   + A D     +T + T+N+ V +VND  P F   
Sbjct: 2308 FTLSASGELGVTQSLDRETKEQFVLMITAVDGGSPALTGTGTINVIVDDVNDNVPTFASK 2367

Query: 146  QYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDS-GHI---SI 201
             Y   +P     D   G+ +  V A+D D      + + G     F+IN S G I   ++
Sbjct: 2368 AYFTTIPE----DAPTGTDVLLVNASDADASTNAVVRIIGG-NSQFTINPSTGQIITSAL 2422

Query: 202  VDLSALNTSTIQLVVVATDTG--------------------NPPRQASVPAIMHFP 237
            +D    +  T  LVVV +D G                    NPPR    P + H P
Sbjct: 2423 LDRETKDNYT--LVVVCSDAGYPEPLSSSTSVLVTVTDVNDNPPRFQHHPYVTHIP 2476



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 50/193 (25%), Positives = 94/193 (48%), Gaps = 12/193 (6%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRDLR--VKYWLS-NDYGERFSISR-QGDISLM 100
           F +  YS    EN+ + Y + +V+ +   DL   + Y ++  D    F+I++  G ++  
Sbjct: 793 FGQVAYSFVVFENVALGYHVGSVSAST-MDLNSNISYLITTGDQKGMFAINQVTGQLTTA 851

Query: 101 QCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLT 160
             +D E +  Y+  V A+   +T    VNI+V ++ND  P F      + +    + +  
Sbjct: 852 NVIDREEQSFYQLKVVASGGTVTGDTMVNITVKDLNDNSPHFLQAIESVNV----VENWQ 907

Query: 161 PGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIN-DSGHISIVDLSALNTSTIQLVVV 217
            G  I + +A D D+G    V  SL+   + +F+IN  +G IS++    +   + Q+ ++
Sbjct: 908 AGHSIFQAKAVDPDEGVNGMVLYSLKQNPKNLFAINGKNGTISLLGPLDVQAGSYQIEIL 967

Query: 218 ATDTGNPPRQASV 230
           A+D G P   +SV
Sbjct: 968 ASDMGVPQLSSSV 980



 Score = 43.5 bits (101), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 42/161 (26%), Positives = 74/161 (45%), Gaps = 16/161 (9%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGERFSIS-RQGDISLM 100
            F  ++Y  + LEN P    ++ +     +   +  + Y + +   + F +    G I+  
Sbjct: 3194 FLSDDYFPTVLENAPSGTTVIHLNATDADSGTNAVIAYTVQSSDSDLFVVDPNTGVITTQ 3253

Query: 101  QCLDYETEDSYRFTVYA---TDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLA 157
              LD+ET+ SY  TV A    D    + ATVN+ +   N++ PRF    Y     +  ++
Sbjct: 3254 GFLDFETKQSYHLTVKAFNVPDEERCSFATVNVQLKGTNEYVPRFVSKLY-----YFEIS 3308

Query: 158  DLTP-GSVIGKVEAAD---GDKGDRVTLSLRGPYEKMFSIN 194
            +  P G+++G+V A+D   G  G+   L      +K F IN
Sbjct: 3309 EAAPKGTIVGEVFASDRDLGTDGEVHYLIFGNSRKKGFQIN 3349



 Score = 40.0 bits (92), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 55/108 (50%), Gaps = 7/108 (6%)

Query: 89   FSISRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYP 145
            FS+S  G +S  + +D E    +  +V   D+    M+++ TV+I+V++ ND   + R  
Sbjct: 3558 FSLSTVGVLSTTREIDREQIADFYLSVVTKDSGVPQMSSTGTVHITVIDQNDNPSQSR-- 3615

Query: 146  QYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSI 193
              E+F+ +    +L PG ++G V+  D D  D    SL      +FSI
Sbjct: 3616 TVEIFVNY--YGNLFPGGILGSVKPQDPDVLDSFHCSLTSGVTSLFSI 3661


>gi|300794761|ref|NP_001178634.1| protocadherin Fat 4 [Rattus norvegicus]
          Length = 4979

 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 77/269 (28%), Positives = 121/269 (44%), Gaps = 42/269 (15%)

Query: 2    INEDD-----FLQPITLV---VRAIQYDNQDRYALATLIVSKAG--TSLREL-------- 43
            + EDD     FL P+T V    RA+ Y+ Q  Y L        G  T++R          
Sbjct: 1880 VEEDDGDGVFFLNPVTGVFNLTRALDYERQQYYILTVRAEDGGGQFTTIRAYFNILDIND 1939

Query: 44   ---QFSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWL-SNDYGERFSISRQGD 96
                FS + YS S +ENLP+   +L        D    ++ Y + S D   +F++ + G 
Sbjct: 1940 NPPVFSLSSYSTSLMENLPLGSTVLVFNVTDADDGVNSQLSYSIASGDSLGQFAVDKHGV 1999

Query: 97   ISLMQCLDYETEDSYRFTVYATD------TLMTTSATVNISVVNVNDWDPRFRYPQYELF 150
            +  ++ LD E++  Y   +   D      +  T++A V+I +++VND  P F  P+    
Sbjct: 2000 LKALKALDRESQSFYNLVIQVHDLPQPPASRFTSTAQVSIILLDVNDNPPMFLSPK---- 2055

Query: 151  LPHIPLADLTP-GSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIND-SGHISIV-DLS 205
            L +IP  + TP  +V+ K +A D D G    +  +L  P    FSI    G + +  +L 
Sbjct: 2056 LTYIP--ENTPIDTVVFKAQATDPDSGPNSYIEYTLLNPAGNKFSIGTIDGEVHLTGELD 2113

Query: 206  ALNTSTIQLVVVATDTGNPPRQASVPAIM 234
                S   L VVATD G PP  +S   ++
Sbjct: 2114 REEVSNYSLTVVATDKGQPPLSSSTEVVV 2142



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 62/192 (32%), Positives = 93/192 (48%), Gaps = 24/192 (12%)

Query: 50   YSVSALENLPVNYVLLTVTTNKPRDLRV----KYWLSNDYGERFSIS-RQGDISLMQCLD 104
            +S    EN P+ Y +  VTT+   D+ +    +Y ++ D    F+I+   GDI + + L+
Sbjct: 2777 FSAYVSENSPLGYTVTRVTTSD-EDIGINAISRYSIA-DTALPFTINPNTGDIVISRPLN 2834

Query: 105  YETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSV 164
             E  D YR  V A D+  T S  V I V ++ND  PRF  P Y L  P   L +L  GS 
Sbjct: 2835 REDTDRYRIRVSAHDSGWTVSTDVTIFVTDINDNTPRFSRPSYYLDCPE--LTEL--GSR 2890

Query: 165  IGKVEAADGDKGD--RVTLSLRGPYEKMFSIN-DSGHI---------SIVDLSALNTSTI 212
            + +V A D D+G   +V   ++   E  F IN  +G I         ++   S +N +  
Sbjct: 2891 VTQVSATDPDEGSNGQVFYFIKSKSE-YFRINATTGEIFNKQVLKYQNVSGFSNVNINRH 2949

Query: 213  QLVVVATDTGNP 224
              +V A+D GNP
Sbjct: 2950 SFIVTASDRGNP 2961



 Score = 58.2 bits (139), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 35/101 (34%), Positives = 49/101 (48%), Gaps = 5/101 (4%)

Query: 77   VKYWLSNDYGERFSIS-RQGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNV 135
            V Y L +   + F I    GD+   + LD E    Y   V A D L ++   +NI++ +V
Sbjct: 1775 VTYALISGADDSFRIDPESGDLIATKRLDREHRSKYSLLVRADDGLQSSDMRINITISDV 1834

Query: 136  NDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG 176
            ND  PRF  P Y   +P     D TPGS++  + A D D G
Sbjct: 1835 NDHTPRFSRPVYSFDIPE----DTTPGSLVAAILATDDDSG 1871



 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 51/192 (26%), Positives = 97/192 (50%), Gaps = 10/192 (5%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVT-TNKPRDLRVKYWLS-NDYGERFSISR-QGDISLMQ 101
           FS+  YS    EN+ + Y + +V+ T    +  + Y ++  D    F+++   G ++   
Sbjct: 793 FSQAAYSFVVFENVALGYHVGSVSATTMDLNANISYLITTGDQRGMFAMNPVTGQLTTAS 852

Query: 102 CLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTP 161
            +D E +  Y+  V A+   +T  A VNI+V ++ND  P F      +      + +   
Sbjct: 853 VIDREEQSFYQLRVVASGGAVTGDAVVNITVKDLNDNAPHFLQAVESI----DAVENWQA 908

Query: 162 GSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIND-SGHISIVDLSALNTSTIQLVVVA 218
           G  I + +A D D+G   RV  SL+   + +F+IN+ +G+IS++    ++  + Q+ +VA
Sbjct: 909 GHSIFQAKAVDPDEGVNGRVLYSLKQNPKNLFTINEQNGNISLLGTLDVHAGSYQVEIVA 968

Query: 219 TDTGNPPRQASV 230
           +D G P   +S+
Sbjct: 969 SDMGVPQLSSSI 980



 Score = 55.8 bits (133), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 57/189 (30%), Positives = 94/189 (49%), Gaps = 15/189 (7%)

Query: 56   ENLPVNYVLLTVTTNKPRDLRVKYWL-SNDYGERFSISR-QGDISLMQCLDYETEDSYRF 113
            EN PV  ++ T+T +  R   + Y++ S + G  F I    G +S+ Q LD+E    Y  
Sbjct: 2578 ENQPVGTLVTTITGSSLRGETLSYYIASGNLGNAFQIDPLTGQVSISQPLDFEKIQKYIV 2637

Query: 114  TVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEA 170
             + A D      ++   ++I+V+++ND  P F   + + F+  I L +L+P  ++  V A
Sbjct: 2638 WIEARDGGFPPFSSYEKLDITVLDINDNAPAF---EEDPFVSEI-LENLSPRKIL-TVSA 2692

Query: 171  ADGDKGDRVTLS---LRGPYEKMFSINDS-GHI-SIVDLSALNTSTIQLVVVATDTGNPP 225
             D D G    L+   + G  E  F+IN + G I SI  L     S  +L V ++D G+P 
Sbjct: 2693 TDKDSGPNGQLAYEIVNGNQESSFTINHATGEIRSIRPLDREKISYYELTVKSSDKGSPS 2752

Query: 226  RQASVPAIM 234
            +  SV  I+
Sbjct: 2753 QSTSVKVII 2761



 Score = 55.1 bits (131), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 58/198 (29%), Positives = 88/198 (44%), Gaps = 24/198 (12%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSN-DYGERFSISRQGDISLM 100
            F +  Y V+  E+ PVN     V     +   +  + Y +++ + GE F I   G + + 
Sbjct: 996  FDQISYEVTLSESEPVNSRFFKVQALDKDSGANGEIAYAITDGNSGEAFGIFPDGQLYIK 1055

Query: 101  QCLDYETEDSYRFTVYATDTLMTT-SATVNISVV--NVNDWDPRFRYPQYELFLPHIPLA 157
              LD E +D Y   V A+D  +   SATVN++V+  +VND  P F    Y  +      A
Sbjct: 1056 SELDRELQDRYVLLVVASDRAVEPLSATVNVTVILEDVNDNRPLFNSTNYTFYFEEEQRA 1115

Query: 158  DLTPGSVIGKVEAADGDKGD----RVTLSLRGPYEKMFSINDSGHIS---IVDLSAL--- 207
                GS +GKV A D D G     R    +  P  ++ +I  +G I+     D  +L   
Sbjct: 1116 ----GSFVGKVSAVDKDFGPNGEVRYAFEVAQPDFELHAI--TGEITNTHKFDRESLMRR 1169

Query: 208  -NTSTIQLVVVATDTGNP 224
              T+     V+ATD G P
Sbjct: 1170 RGTAVFSFTVIATDQGLP 1187



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 62/225 (27%), Positives = 92/225 (40%), Gaps = 39/225 (17%)

Query: 45   FSKNEYSVSALENLPV--NYVLLTVTTNK---PRDLRVKYWLSNDYGERFSISRQGDISL 99
            F  + YSV+  ENL      +L  V  +    P        L  +    F+++  G++ +
Sbjct: 2259 FELSPYSVNVPENLGALPRTILQVVARDDDQGPNSQLSYVLLGGNEDNAFALTASGELRV 2318

Query: 100  MQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
             Q LD E  D +   V A D     +T + T+NI V ++ND  P F    Y   +P    
Sbjct: 2319 TQSLDREARDHFVLVVTAADAGSPALTGTGTINIIVDDINDNVPTFASNMYFTAIPE--- 2375

Query: 157  ADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDS-GHI---SIVDLSALNTSTI 212
             D   G+ +  V A+D D      +S+ G     F+IN S G I   +++D    +  T 
Sbjct: 2376 -DAPTGTDVLLVNASDADAATNAVISIIGG-NSQFTINPSTGQIITSALLDRETKDNYT- 2432

Query: 213  QLVVVATDTG--------------------NPPRQASVPAIMHFP 237
             LVVVA+D G                    NPPR    P + H P
Sbjct: 2433 -LVVVASDAGSPESLSSSTSVLVSVTDVNDNPPRFQHHPYVTHIP 2476



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 46/164 (28%), Positives = 83/164 (50%), Gaps = 13/164 (7%)

Query: 81   LSNDYGERFSISR-QGDISLMQCLDYETEDSYRFTVYATDTL---MTTSATVNISVVNVN 136
            L  +   +FSI R  G ++L+  LDYE   +Y   + A D+    + ++ T++I +++ N
Sbjct: 1250 LKGNEERQFSIDRFSGQVTLVGKLDYEATPAYSLLIQAVDSGTVPLNSTCTLSIDILDEN 1309

Query: 137  DWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTL--SLRGPY-EKMFSI 193
            D  P F  P+  LF+    L ++  G ++  V A D D G    L  ++ G      FSI
Sbjct: 1310 DNTPSF--PKSTLFVD--VLENMRIGELVSSVTATDSDSGVNADLHYTITGSNNHGTFSI 1365

Query: 194  N-DSGHISIVDLSALNTSTI-QLVVVATDTGNPPRQASVPAIMH 235
            + ++G I +       T ++ +L + A D G PPR +++  ++H
Sbjct: 1366 SPNTGSIFLAKKLDFETQSLYKLNITAKDQGRPPRSSTMSVVIH 1409



 Score = 47.8 bits (112), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 70/243 (28%), Positives = 103/243 (42%), Gaps = 34/243 (13%)

Query: 11  ITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNE-YSVSALENLPVNYVLLTVTT 69
           I L + A       + + A L+VS    + ++  FS+ E Y VS +EN P    LL +  
Sbjct: 548 IVLNISARDQGVHPKVSYAQLVVSVLDVNDQKPVFSQPEGYEVSVVENAPTGTELLVLGA 607

Query: 70  NKPRDLRVKYWLSNDYGERFSISR-------------QGDISLMQCLDYETEDSYRFTVY 116
                      L ++   RFS+                G +S +  LD E +  Y   + 
Sbjct: 608 TDGD-------LGDNGTVRFSLQEAESDQRLFRLDPVSGRLSTISSLDREEQAFYCLLIL 660

Query: 117 ATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADG 173
           ATD      +++  VN+S++++ND  P F   QY     HI   +   GS +  V A D 
Sbjct: 661 ATDLGSPPQSSTVQVNVSLLDINDNSPVFYPVQY---FAHI-QENEPGGSYVTTVSATDP 716

Query: 174 DKGDRVTL--SLRGPYEKMFSIN-DSGHISI-VDLSALNTSTIQLVVVATDTGN--PPRQ 227
           D G   T+  S+       F I+  SG IS  + L     +  QL +VATD GN   P Q
Sbjct: 717 DMGPNGTVKYSISAGDRSRFQIHAKSGVISTKMALDREEKTAYQLQIVATDGGNLQSPSQ 776

Query: 228 ASV 230
           A V
Sbjct: 777 AIV 779



 Score = 45.1 bits (105), Expect = 0.063,   Method: Compositional matrix adjust.
 Identities = 42/160 (26%), Positives = 73/160 (45%), Gaps = 13/160 (8%)

Query: 25   RYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWL 81
            R    +L VS    +     F  +E+  + +EN P    ++ +     +   +  + Y +
Sbjct: 3174 RTGYCSLTVSVIDVNDNSPVFVPDEFFPTVMENAPSGTTVIHLNATDADSGANAVIAYTV 3233

Query: 82   SNDYGERFSIS-RQGDISLMQCLDYETEDSYRFTVYA---TDTLMTTSATVNISVVNVND 137
             +   + F I    G I+    LD+ET+ SY  TV A    D    + ATVNI ++  N+
Sbjct: 3234 QSSDSDLFVIDPNTGVITTQGFLDFETKQSYHLTVKAFNVPDEEKCSFATVNIQLMGTNE 3293

Query: 138  WDPRFRYPQYELFLPHIPLADLTP-GSVIGKVEAADGDKG 176
            + PRF    Y     +  +++  P G+ +G+V A+D D G
Sbjct: 3294 YVPRFVSKLY-----YFEVSEAAPRGTAVGEVFASDRDMG 3328



 Score = 42.0 bits (97), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 41/142 (28%), Positives = 71/142 (50%), Gaps = 14/142 (9%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLR----VKYWLSNDYGER-FSI-SRQGDI 97
            +FS++  S +  E+  +  V+ TV+  + RD      + Y +S+   E  F+I S  G +
Sbjct: 3088 EFSQSHISATIPESHSIGSVVRTVSA-RDRDTAMNGLISYNISSGNEEGIFAINSSTGVV 3146

Query: 98   SLMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHI 154
            +L + LDYE    +  T+ ATD      T   ++ +SV++VND  P F  P  + F P +
Sbjct: 3147 TLAKALDYELSSKHEMTISATDGGWVARTGYCSLTVSVIDVNDNSPVF-VP--DEFFPTV 3203

Query: 155  PLADLTPGSVIGKVEAADGDKG 176
             + +   G+ +  + A D D G
Sbjct: 3204 -MENAPSGTTVIHLNATDADSG 3224



 Score = 40.0 bits (92), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 60/201 (29%), Positives = 91/201 (45%), Gaps = 15/201 (7%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYG-ERFSIS-RQGDISLMQC 102
            F+ N Y  +  E+ P    +L V  +   D      +S   G  +F+I+   G I     
Sbjct: 2364 FASNMYFTAIPEDAPTGTDVLLVNASD-ADAATNAVISIIGGNSQFTINPSTGQIITSAL 2422

Query: 103  LDYETEDSYRFTVYATDT----LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLAD 158
            LD ET+D+Y   V A+D      +++S +V +SV +VND  PRF   Q+  ++ HIP + 
Sbjct: 2423 LDRETKDNYTLVVVASDAGSPESLSSSTSVLVSVTDVNDNPPRF---QHHPYVTHIP-SP 2478

Query: 159  LTPGSVIGKVEAADGDKGDRVTL--SLRGPYEKMFSINDSGHISIVDLSALN-TSTIQLV 215
              PGS +  V   D D G    L  SL G   + F I D    +I+    L+  S +   
Sbjct: 2479 TPPGSFVFAVTVTDADIGPNSELHYSLSGRNSEKFHI-DPLRGAIMAAGPLSGASEVTFS 2537

Query: 216  VVATDTGNPPRQASVPAIMHF 236
            V   D G+ P+  S    + F
Sbjct: 2538 VHVKDGGSFPKTDSTTVTVRF 2558



 Score = 39.7 bits (91), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 58/225 (25%), Positives = 104/225 (46%), Gaps = 21/225 (9%)

Query: 23  QDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPV-NYVLLTVTTNKPRDLR--VKY 79
           Q R ++A+L++     +     F +  Y V+  E +P  +YV     T+    L   ++Y
Sbjct: 453 QARSSVASLVIFVNDINDHPPVFEQQVYRVNLSEEVPPGSYVSGVSATDGDSGLNANLRY 512

Query: 80  WLSNDYG-ERFSISRQGDI---SLMQCLDYETEDSYRFTVYATDTLM---TTSATVNISV 132
            + +  G   F IS    +   S    LD E        + A D  +    + A + +SV
Sbjct: 513 SIVSGNGLGWFHISEHSGLVTTSAAGGLDRELASQIVLNISARDQGVHPKVSYAQLVVSV 572

Query: 133 VNVNDWDPRFRYPQ-YELFLPHIPLADLTPGSVIGKVEAADGDKGD----RVTLSLRGPY 187
           ++VND  P F  P+ YE+ +    + +   G+ +  + A DGD GD    R +L      
Sbjct: 573 LDVNDQKPVFSQPEGYEVSV----VENAPTGTELLVLGATDGDLGDNGTVRFSLQEAESD 628

Query: 188 EKMFSIND-SGHIS-IVDLSALNTSTIQLVVVATDTGNPPRQASV 230
           +++F ++  SG +S I  L     +   L+++ATD G+PP+ ++V
Sbjct: 629 QRLFRLDPVSGRLSTISSLDREEQAFYCLLILATDLGSPPQSSTV 673



 Score = 39.7 bits (91), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 37/135 (27%), Positives = 64/135 (47%), Gaps = 8/135 (5%)

Query: 89   FSISRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYP 145
            FS++  G +S  + +D E    +  +V   D+    M+++ TV+I+V++ ND   + R  
Sbjct: 3558 FSLNTAGVLSTTREIDREQIADFYLSVVTRDSGAPQMSSTGTVHITVLDQNDNPSQSR-- 3615

Query: 146  QYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSGHISIVDLS 205
              E+F+ +    +L PG  +G V+  D D  D    SL      +FSI  +G   +    
Sbjct: 3616 TVEIFVNY--YGNLFPGGTLGSVKPQDPDVLDSFHCSLTSGVTSLFSI-PAGSCDLSSQP 3672

Query: 206  ALNTSTIQLVVVATD 220
                 T  L VV++D
Sbjct: 3673 RSTDGTFDLTVVSSD 3687



 Score = 39.3 bits (90), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 77/167 (46%), Gaps = 24/167 (14%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKP-----RDLRVKYWLSNDYGERFSIS-RQGDIS 98
            F K+   V  LEN+ +  ++ +VT          DL      SN++G  FSIS   G I 
Sbjct: 1315 FPKSTLFVDVLENMRIGELVSSVTATDSDSGVNADLHYTITGSNNHGT-FSISPNTGSIF 1373

Query: 99   LMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELF---LP 152
            L + LD+ET+  Y+  + A D      +++ +V I V + ND  P F  P  ++F   + 
Sbjct: 1374 LAKKLDFETQSLYKLNITAKDQGRPPRSSTMSVVIHVRDFNDNPPSF--PPGDIFKSIVE 1431

Query: 153  HIPLADLTPGSVIGKVEAADGDKGDRVTLSL----RGPYEKMFSIND 195
            +IPL     G+ +  V A D D      LS     + P    FSI++
Sbjct: 1432 NIPL-----GTSVISVTAHDPDADINGQLSYAIIQQMPRGNHFSIDE 1473



 Score = 38.9 bits (89), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 56/208 (26%), Positives = 91/208 (43%), Gaps = 23/208 (11%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGERFSISRQ-GDISLM 100
           F  + Y     E+  V   +L V     ++  +  ++Y L  D G  F +  + G I++ 
Sbjct: 250 FGSSHYQAGVPEDAVVGSSVLQVAAADADEGTNADIRYRL-QDEGTPFQMDPETGLITVR 308

Query: 101 QCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDP--RFRY-PQYELFLPHI 154
           + LD+E    Y  TV ATD     +T  A   I +++VND DP  +FRY P    +    
Sbjct: 309 EPLDFEARRQYSLTVQATDRGVPSLTGRAEALIQLLDVNDNDPVVKFRYFPATSRYASVD 368

Query: 155 PLADLTPGSVIGKVEAADGD----KGDRVTLSLRGPYEKMFSINDSG--HISIVDL-SAL 207
             A +  G+V+  +   D D     G+     L G  ++ F +  S   ++S++ + SAL
Sbjct: 369 ENAQV--GTVVALLTVTDADSPAANGNISVQILGGNEQRHFEVQRSKVPNLSLIKVASAL 426

Query: 208 NTSTI---QLVVVATDTGNPPRQASVPA 232
           +   I    L V  +D    P  A V A
Sbjct: 427 DRERIPSYNLTVSVSDNSGAPPTAEVQA 454


>gi|392338710|ref|XP_001070073.3| PREDICTED: protocadherin Fat 4 [Rattus norvegicus]
          Length = 4981

 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 77/269 (28%), Positives = 121/269 (44%), Gaps = 42/269 (15%)

Query: 2    INEDD-----FLQPITLV---VRAIQYDNQDRYALATLIVSKAG--TSLREL-------- 43
            + EDD     FL P+T V    RA+ Y+ Q  Y L        G  T++R          
Sbjct: 1880 VEEDDGDGVFFLNPVTGVFNLTRALDYERQQYYILTVRAEDGGGQFTTIRAYFNILDIND 1939

Query: 44   ---QFSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWL-SNDYGERFSISRQGD 96
                FS + YS S +ENLP+   +L        D    ++ Y + S D   +F++ + G 
Sbjct: 1940 NPPVFSLSSYSTSLMENLPLGSTVLVFNVTDADDGVNSQLSYSIASGDSLGQFAVDKHGV 1999

Query: 97   ISLMQCLDYETEDSYRFTVYATD------TLMTTSATVNISVVNVNDWDPRFRYPQYELF 150
            +  ++ LD E++  Y   +   D      +  T++A V+I +++VND  P F  P+    
Sbjct: 2000 LKALKALDRESQSFYNLVIQVHDLPQPPASRFTSTAQVSIILLDVNDNPPMFLSPK---- 2055

Query: 151  LPHIPLADLTP-GSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIND-SGHISIV-DLS 205
            L +IP  + TP  +V+ K +A D D G    +  +L  P    FSI    G + +  +L 
Sbjct: 2056 LTYIP--ENTPIDTVVFKAQATDPDSGPNSYIEYTLLNPAGNKFSIGTIDGEVHLTGELD 2113

Query: 206  ALNTSTIQLVVVATDTGNPPRQASVPAIM 234
                S   L VVATD G PP  +S   ++
Sbjct: 2114 REEVSNYSLTVVATDKGQPPLSSSTEVVV 2142



 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 62/192 (32%), Positives = 93/192 (48%), Gaps = 24/192 (12%)

Query: 50   YSVSALENLPVNYVLLTVTTNKPRDLRV----KYWLSNDYGERFSIS-RQGDISLMQCLD 104
            +S    EN P+ Y +  VTT+   D+ +    +Y ++ D    F+I+   GDI + + L+
Sbjct: 2779 FSAYVSENSPLGYTVTRVTTSD-EDIGINAISRYSIA-DTALPFTINPNTGDIVISRPLN 2836

Query: 105  YETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSV 164
             E  D YR  V A D+  T S  V I V ++ND  PRF  P Y L  P   L +L  GS 
Sbjct: 2837 REDTDRYRIRVSAHDSGWTVSTDVTIFVTDINDNTPRFSRPSYYLDCPE--LTEL--GSR 2892

Query: 165  IGKVEAADGDKGD--RVTLSLRGPYEKMFSIN-DSGHI---------SIVDLSALNTSTI 212
            + +V A D D+G   +V   ++   E  F IN  +G I         ++   S +N +  
Sbjct: 2893 VTQVSATDPDEGSNGQVFYFIKSKSE-YFRINATTGEIFNKQVLKYQNVSGFSNVNINRH 2951

Query: 213  QLVVVATDTGNP 224
              +V A+D GNP
Sbjct: 2952 SFIVTASDRGNP 2963



 Score = 58.2 bits (139), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 35/101 (34%), Positives = 49/101 (48%), Gaps = 5/101 (4%)

Query: 77   VKYWLSNDYGERFSIS-RQGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNV 135
            V Y L +   + F I    GD+   + LD E    Y   V A D L ++   +NI++ +V
Sbjct: 1775 VTYALISGADDSFRIDPESGDLIATKRLDREHRSKYSLLVRADDGLQSSDMRINITISDV 1834

Query: 136  NDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG 176
            ND  PRF  P Y   +P     D TPGS++  + A D D G
Sbjct: 1835 NDHTPRFSRPVYSFDIPE----DTTPGSLVAAILATDDDSG 1871



 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 51/192 (26%), Positives = 97/192 (50%), Gaps = 10/192 (5%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVT-TNKPRDLRVKYWLS-NDYGERFSISR-QGDISLMQ 101
           FS+  YS    EN+ + Y + +V+ T    +  + Y ++  D    F+++   G ++   
Sbjct: 793 FSQAAYSFVVFENVALGYHVGSVSATTMDLNANISYLITTGDQRGMFAMNPVTGQLTTAS 852

Query: 102 CLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTP 161
            +D E +  Y+  V A+   +T  A VNI+V ++ND  P F      +      + +   
Sbjct: 853 VIDREEQSFYQLRVVASGGAVTGDAVVNITVKDLNDNAPHFLQAVESI----DAVENWQA 908

Query: 162 GSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIND-SGHISIVDLSALNTSTIQLVVVA 218
           G  I + +A D D+G   RV  SL+   + +F+IN+ +G+IS++    ++  + Q+ +VA
Sbjct: 909 GHSIFQAKAVDPDEGVNGRVLYSLKQNPKNLFTINEQNGNISLLGTLDVHAGSYQVEIVA 968

Query: 219 TDTGNPPRQASV 230
           +D G P   +S+
Sbjct: 969 SDMGVPQLSSSI 980



 Score = 55.8 bits (133), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 57/189 (30%), Positives = 94/189 (49%), Gaps = 15/189 (7%)

Query: 56   ENLPVNYVLLTVTTNKPRDLRVKYWL-SNDYGERFSISR-QGDISLMQCLDYETEDSYRF 113
            EN PV  ++ T+T +  R   + Y++ S + G  F I    G +S+ Q LD+E    Y  
Sbjct: 2580 ENQPVGTLVTTITGSSLRGETLSYYIASGNLGNAFQIDPLTGQVSISQPLDFEKIQKYIV 2639

Query: 114  TVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEA 170
             + A D      ++   ++I+V+++ND  P F   + + F+  I L +L+P  ++  V A
Sbjct: 2640 WIEARDGGFPPFSSYEKLDITVLDINDNAPAF---EEDPFVSEI-LENLSPRKIL-TVSA 2694

Query: 171  ADGDKGDRVTLS---LRGPYEKMFSINDS-GHI-SIVDLSALNTSTIQLVVVATDTGNPP 225
             D D G    L+   + G  E  F+IN + G I SI  L     S  +L V ++D G+P 
Sbjct: 2695 TDKDSGPNGQLAYEIVNGNQESSFTINHATGEIRSIRPLDREKISYYELTVKSSDKGSPS 2754

Query: 226  RQASVPAIM 234
            +  SV  I+
Sbjct: 2755 QSTSVKVII 2763



 Score = 55.1 bits (131), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 58/198 (29%), Positives = 88/198 (44%), Gaps = 24/198 (12%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSN-DYGERFSISRQGDISLM 100
            F +  Y V+  E+ PVN     V     +   +  + Y +++ + GE F I   G + + 
Sbjct: 996  FDQISYEVTLSESEPVNSRFFKVQALDKDSGANGEIAYAITDGNSGEAFGIFPDGQLYIK 1055

Query: 101  QCLDYETEDSYRFTVYATDTLMTT-SATVNISVV--NVNDWDPRFRYPQYELFLPHIPLA 157
              LD E +D Y   V A+D  +   SATVN++V+  +VND  P F    Y  +      A
Sbjct: 1056 SELDRELQDRYVLLVVASDRAVEPLSATVNVTVILEDVNDNRPLFNSTNYTFYFEEEQRA 1115

Query: 158  DLTPGSVIGKVEAADGDKGD----RVTLSLRGPYEKMFSINDSGHIS---IVDLSAL--- 207
                GS +GKV A D D G     R    +  P  ++ +I  +G I+     D  +L   
Sbjct: 1116 ----GSFVGKVSAVDKDFGPNGEVRYAFEVAQPDFELHAI--TGEITNTHKFDRESLMRR 1169

Query: 208  -NTSTIQLVVVATDTGNP 224
              T+     V+ATD G P
Sbjct: 1170 RGTAVFSFTVIATDQGLP 1187



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 46/164 (28%), Positives = 83/164 (50%), Gaps = 13/164 (7%)

Query: 81   LSNDYGERFSISR-QGDISLMQCLDYETEDSYRFTVYATDTL---MTTSATVNISVVNVN 136
            L  +   +FSI R  G ++L+  LDYE   +Y   + A D+    + ++ T++I +++ N
Sbjct: 1250 LKGNEERQFSIDRFSGQVTLVGKLDYEATPAYSLLIQAVDSGTVPLNSTCTLSIDILDEN 1309

Query: 137  DWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTL--SLRGPY-EKMFSI 193
            D  P F  P+  LF+    L ++  G ++  V A D D G    L  ++ G      FSI
Sbjct: 1310 DNTPSF--PKSTLFVD--VLENMRIGELVSSVTATDSDSGVNADLHYTITGSNNHGTFSI 1365

Query: 194  N-DSGHISIVDLSALNTSTI-QLVVVATDTGNPPRQASVPAIMH 235
            + ++G I +       T ++ +L + A D G PPR +++  ++H
Sbjct: 1366 SPNTGSIFLAKKLDFETQSLYKLNITAKDQGRPPRSSTMSVVIH 1409



 Score = 48.9 bits (115), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 62/228 (27%), Positives = 92/228 (40%), Gaps = 43/228 (18%)

Query: 45   FSKNEYSVSALENLPV--NYVLLTVTTNK---PRDLRVKYWLSNDYGERFSISRQGDISL 99
            F  + YSV+  ENL      +L  V  +    P        L  +    F+++  G++ +
Sbjct: 2259 FELSPYSVNVPENLGALPRTILQVVARDDDQGPNSQLSYVLLGGNEDNAFALTASGELRV 2318

Query: 100  MQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
             Q LD E  D +   V A D     +T + T+NI V ++ND  P F    Y   +P    
Sbjct: 2319 TQSLDREARDHFVLVVTAADAGSPALTGTGTINIIVDDINDNVPTFASNMYFTAIPE--- 2375

Query: 157  ADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSINDS-GHI---SIVDLSALNT 209
             D   G+ +  V A+D D      +S   + G     F+IN S G I   +++D    + 
Sbjct: 2376 -DAPTGTDVLLVNASDADAATNAVISYSIIGG--NSQFTINPSTGQIITSALLDRETKDN 2432

Query: 210  STIQLVVVATDTG--------------------NPPRQASVPAIMHFP 237
             T  LVVVA+D G                    NPPR    P + H P
Sbjct: 2433 YT--LVVVASDAGSPESLSSSTSVLVSVTDVNDNPPRFQHHPYVTHIP 2478



 Score = 47.8 bits (112), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 70/243 (28%), Positives = 103/243 (42%), Gaps = 34/243 (13%)

Query: 11  ITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNE-YSVSALENLPVNYVLLTVTT 69
           I L + A       + + A L+VS    + ++  FS+ E Y VS +EN P    LL +  
Sbjct: 548 IVLNISARDQGVHPKVSYAQLVVSVLDVNDQKPVFSQPEGYEVSVVENAPTGTELLVLGA 607

Query: 70  NKPRDLRVKYWLSNDYGERFSISR-------------QGDISLMQCLDYETEDSYRFTVY 116
                      L ++   RFS+                G +S +  LD E +  Y   + 
Sbjct: 608 TDGD-------LGDNGTVRFSLQEAESDQRLFRLDPVSGRLSTISSLDREEQAFYCLLIL 660

Query: 117 ATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADG 173
           ATD      +++  VN+S++++ND  P F   QY     HI   +   GS +  V A D 
Sbjct: 661 ATDLGSPPQSSTVQVNVSLLDINDNSPVFYPVQY---FAHI-QENEPGGSYVTTVSATDP 716

Query: 174 DKGDRVTL--SLRGPYEKMFSIN-DSGHISI-VDLSALNTSTIQLVVVATDTGN--PPRQ 227
           D G   T+  S+       F I+  SG IS  + L     +  QL +VATD GN   P Q
Sbjct: 717 DMGPNGTVKYSISAGDRSRFQIHAKSGVISTKMALDREEKTAYQLQIVATDGGNLQSPSQ 776

Query: 228 ASV 230
           A V
Sbjct: 777 AIV 779



 Score = 45.1 bits (105), Expect = 0.064,   Method: Compositional matrix adjust.
 Identities = 42/160 (26%), Positives = 73/160 (45%), Gaps = 13/160 (8%)

Query: 25   RYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWL 81
            R    +L VS    +     F  +E+  + +EN P    ++ +     +   +  + Y +
Sbjct: 3176 RTGYCSLTVSVIDVNDNSPVFVPDEFFPTVMENAPSGTTVIHLNATDADSGANAVIAYTV 3235

Query: 82   SNDYGERFSIS-RQGDISLMQCLDYETEDSYRFTVYA---TDTLMTTSATVNISVVNVND 137
             +   + F I    G I+    LD+ET+ SY  TV A    D    + ATVNI ++  N+
Sbjct: 3236 QSSDSDLFVIDPNTGVITTQGFLDFETKQSYHLTVKAFNVPDEEKCSFATVNIQLMGTNE 3295

Query: 138  WDPRFRYPQYELFLPHIPLADLTP-GSVIGKVEAADGDKG 176
            + PRF    Y     +  +++  P G+ +G+V A+D D G
Sbjct: 3296 YVPRFVSKLY-----YFEVSEAAPRGTAVGEVFASDRDMG 3330



 Score = 41.6 bits (96), Expect = 0.57,   Method: Compositional matrix adjust.
 Identities = 41/142 (28%), Positives = 71/142 (50%), Gaps = 14/142 (9%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLR----VKYWLSNDYGER-FSI-SRQGDI 97
            +FS++  S +  E+  +  V+ TV+  + RD      + Y +S+   E  F+I S  G +
Sbjct: 3090 EFSQSHISATIPESHSIGSVVRTVSA-RDRDTAMNGLISYNISSGNEEGIFAINSSTGVV 3148

Query: 98   SLMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHI 154
            +L + LDYE    +  T+ ATD      T   ++ +SV++VND  P F  P  + F P +
Sbjct: 3149 TLAKALDYELSSKHEMTISATDGGWVARTGYCSLTVSVIDVNDNSPVF-VP--DEFFPTV 3205

Query: 155  PLADLTPGSVIGKVEAADGDKG 176
             + +   G+ +  + A D D G
Sbjct: 3206 -MENAPSGTTVIHLNATDADSG 3226



 Score = 40.0 bits (92), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 48/149 (32%), Positives = 70/149 (46%), Gaps = 12/149 (8%)

Query: 95   GDISLMQCLDYETEDSYRFTVYATDT----LMTTSATVNISVVNVNDWDPRFRYPQYELF 150
            G I     LD ET+D+Y   V A+D      +++S +V +SV +VND  PRF   Q+  +
Sbjct: 2417 GQIITSALLDRETKDNYTLVVVASDAGSPESLSSSTSVLVSVTDVNDNPPRF---QHHPY 2473

Query: 151  LPHIPLADLTPGSVIGKVEAADGDKGDRVTL--SLRGPYEKMFSINDSGHISIVDLSALN 208
            + HIP +   PGS +  V   D D G    L  SL G   + F I D    +I+    L+
Sbjct: 2474 VTHIP-SPTPPGSFVFAVTVTDADIGPNSELHYSLSGRNSEKFHI-DPLRGAIMAAGPLS 2531

Query: 209  -TSTIQLVVVATDTGNPPRQASVPAIMHF 236
              S +   V   D G+ P+  S    + F
Sbjct: 2532 GASEVTFSVHVKDGGSFPKTDSTTVTVRF 2560



 Score = 39.7 bits (91), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 58/225 (25%), Positives = 104/225 (46%), Gaps = 21/225 (9%)

Query: 23  QDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPV-NYVLLTVTTNKPRDLR--VKY 79
           Q R ++A+L++     +     F +  Y V+  E +P  +YV     T+    L   ++Y
Sbjct: 453 QARSSVASLVIFVNDINDHPPVFEQQVYRVNLSEEVPPGSYVSGVSATDGDSGLNANLRY 512

Query: 80  WLSNDYG-ERFSISRQGDI---SLMQCLDYETEDSYRFTVYATDTLM---TTSATVNISV 132
            + +  G   F IS    +   S    LD E        + A D  +    + A + +SV
Sbjct: 513 SIVSGNGLGWFHISEHSGLVTTSAAGGLDRELASQIVLNISARDQGVHPKVSYAQLVVSV 572

Query: 133 VNVNDWDPRFRYPQ-YELFLPHIPLADLTPGSVIGKVEAADGDKGD----RVTLSLRGPY 187
           ++VND  P F  P+ YE+ +    + +   G+ +  + A DGD GD    R +L      
Sbjct: 573 LDVNDQKPVFSQPEGYEVSV----VENAPTGTELLVLGATDGDLGDNGTVRFSLQEAESD 628

Query: 188 EKMFSIND-SGHIS-IVDLSALNTSTIQLVVVATDTGNPPRQASV 230
           +++F ++  SG +S I  L     +   L+++ATD G+PP+ ++V
Sbjct: 629 QRLFRLDPVSGRLSTISSLDREEQAFYCLLILATDLGSPPQSSTV 673



 Score = 39.7 bits (91), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 37/135 (27%), Positives = 64/135 (47%), Gaps = 8/135 (5%)

Query: 89   FSISRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYP 145
            FS++  G +S  + +D E    +  +V   D+    M+++ TV+I+V++ ND   + R  
Sbjct: 3560 FSLNTAGVLSTTREIDREQIADFYLSVVTRDSGAPQMSSTGTVHITVLDQNDNPSQSR-- 3617

Query: 146  QYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSGHISIVDLS 205
              E+F+ +    +L PG  +G V+  D D  D    SL      +FSI  +G   +    
Sbjct: 3618 TVEIFVNY--YGNLFPGGTLGSVKPQDPDVLDSFHCSLTSGVTSLFSI-PAGSCDLSSQP 3674

Query: 206  ALNTSTIQLVVVATD 220
                 T  L VV++D
Sbjct: 3675 RSTDGTFDLTVVSSD 3689



 Score = 39.3 bits (90), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 77/167 (46%), Gaps = 24/167 (14%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKP-----RDLRVKYWLSNDYGERFSIS-RQGDIS 98
            F K+   V  LEN+ +  ++ +VT          DL      SN++G  FSIS   G I 
Sbjct: 1315 FPKSTLFVDVLENMRIGELVSSVTATDSDSGVNADLHYTITGSNNHGT-FSISPNTGSIF 1373

Query: 99   LMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELF---LP 152
            L + LD+ET+  Y+  + A D      +++ +V I V + ND  P F  P  ++F   + 
Sbjct: 1374 LAKKLDFETQSLYKLNITAKDQGRPPRSSTMSVVIHVRDFNDNPPSF--PPGDIFKSIVE 1431

Query: 153  HIPLADLTPGSVIGKVEAADGDKGDRVTLSL----RGPYEKMFSIND 195
            +IPL     G+ +  V A D D      LS     + P    FSI++
Sbjct: 1432 NIPL-----GTSVISVTAHDPDADINGQLSYAIIQQMPRGNHFSIDE 1473



 Score = 38.9 bits (89), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 56/208 (26%), Positives = 91/208 (43%), Gaps = 23/208 (11%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGERFSISRQ-GDISLM 100
           F  + Y     E+  V   +L V     ++  +  ++Y L  D G  F +  + G I++ 
Sbjct: 250 FGSSHYQAGVPEDAVVGSSVLQVAAADADEGTNADIRYRL-QDEGTPFQMDPETGLITVR 308

Query: 101 QCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDP--RFRY-PQYELFLPHI 154
           + LD+E    Y  TV ATD     +T  A   I +++VND DP  +FRY P    +    
Sbjct: 309 EPLDFEARRQYSLTVQATDRGVPSLTGRAEALIQLLDVNDNDPVVKFRYFPATSRYASVD 368

Query: 155 PLADLTPGSVIGKVEAADGD----KGDRVTLSLRGPYEKMFSINDSG--HISIVDL-SAL 207
             A +  G+V+  +   D D     G+     L G  ++ F +  S   ++S++ + SAL
Sbjct: 369 ENAQV--GTVVALLTVTDADSPAANGNISVQILGGNEQRHFEVQRSKVPNLSLIKVASAL 426

Query: 208 NTSTI---QLVVVATDTGNPPRQASVPA 232
           +   I    L V  +D    P  A V A
Sbjct: 427 DRERIPSYNLTVSVSDNSGAPPTAEVQA 454


>gi|296195619|ref|XP_002745420.1| PREDICTED: protocadherin Fat 4 [Callithrix jacchus]
          Length = 4981

 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 79/270 (29%), Positives = 121/270 (44%), Gaps = 44/270 (16%)

Query: 2    INEDD-----FLQPITLV---VRAIQYDNQDRYALATLIVSKAGTSLRELQ--------- 44
            +NEDD     FL PIT V    R + Y+ Q  Y L T+     G     ++         
Sbjct: 1880 VNEDDEDGIFFLNPITGVFNLTRVLDYEVQQYYIL-TVRAEDGGGQFTTIRVYFNILDIN 1938

Query: 45   -----FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWL-SNDYGERFSISRQG 95
                 FS N YS S +ENLPV   +L        D    ++ Y + S D   +F++ + G
Sbjct: 1939 DNPPIFSLNSYSTSLMENLPVGSTVLVFNVTDADDGINSQLAYSIASGDSLGQFTVDKNG 1998

Query: 96   DISLMQCLDYETEDSYRFTVYATD------TLMTTSATVNISVVNVNDWDPRFRYPQYEL 149
             + +++ LD E++  Y   V   D      +  T++A V+I +++VND  P F  P+   
Sbjct: 1999 VLKVLKALDRESQSFYNLVVQVHDLPQIPASRFTSTAQVSIILLDVNDNPPTFLSPK--- 2055

Query: 150  FLPHIPLADLTP-GSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIND-SGHISIV-DL 204
             L +IP  + TP  +V+ K +A D D G    +  +L  P    FSI    G + +  +L
Sbjct: 2056 -LTYIP--ENTPIDTVVFKAQATDPDSGPNSYIEYTLMNPLGNKFSIGTIDGEVRLTGEL 2112

Query: 205  SALNTSTIQLVVVATDTGNPPRQASVPAIM 234
                 S   L VVATD G P   +S   ++
Sbjct: 2113 DREEVSNYTLTVVATDKGQPSLSSSTEVVV 2142



 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 61/192 (31%), Positives = 92/192 (47%), Gaps = 24/192 (12%)

Query: 50   YSVSALENLPVNYVLLTVTTNKPRDLRV----KYWLSNDYGERFSIS-RQGDISLMQCLD 104
            +S    EN P+ Y +  VTT+   D+ +    +Y +  D    F+I+   GDI + + L+
Sbjct: 2777 FSAHVPENSPLGYTVTRVTTSD-EDIGINAISRYSIM-DTSLPFTINPSTGDIVISRPLN 2834

Query: 105  YETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSV 164
             E  D YR  V A D+  T S  V I V +VND  PRF  P Y L  P   L ++  GS 
Sbjct: 2835 REDTDRYRIRVSAHDSGWTVSTDVTIFVTDVNDNAPRFSRPSYYLDCPE--LTEI--GSK 2890

Query: 165  IGKVEAADGDKGD--RVTLSLRGPYEKMFSIN-DSGHI---------SIVDLSALNTSTI 212
            + +V A D D+G   +V   ++   E  F IN  +G I         ++   S +N +  
Sbjct: 2891 VTQVSATDPDEGSNGQVFYFIKSQSE-YFRINATTGEIFNKQILKYQNVTGFSNVNINRH 2949

Query: 213  QLVVVATDTGNP 224
              +V ++D GNP
Sbjct: 2950 SFIVTSSDRGNP 2961



 Score = 58.9 bits (141), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 56/183 (30%), Positives = 89/183 (48%), Gaps = 16/183 (8%)

Query: 56   ENLPVNYVLLTVTTNKPR---DLRVKYWLSNDYGERFSISR-QGDISLMQCLDYETEDSY 111
            EN P++ V+       P    +  ++Y L N  G +FSI    G++ L   LD E   +Y
Sbjct: 2061 ENTPIDTVVFKAQATDPDSGPNSYIEYTLMNPLGNKFSIGTIDGEVRLTGELDREEVSNY 2120

Query: 112  RFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKV 168
              TV ATD     +++S  V + V+++ND +P F    Y++ +    L     G+ I +V
Sbjct: 2121 TLTVVATDKGQPSLSSSTEVVVMVLDINDNNPIFAQALYKVEINENTLT----GTDIIQV 2176

Query: 169  EAADGDKGDRVTLS---LRGPYEKMFSIND-SGHISIVD-LSALNTSTIQLVVVATDTGN 223
             AADGD+G    +    + G   + F ++  +G I++   L    T T  L V ATD G+
Sbjct: 2177 FAADGDEGTNGQVRYGIVNGNTNQEFRLDSVTGAITVAKPLDREKTPTYHLTVQATDRGS 2236

Query: 224  PPR 226
             PR
Sbjct: 2237 TPR 2239



 Score = 58.2 bits (139), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 47/158 (29%), Positives = 82/158 (51%), Gaps = 13/158 (8%)

Query: 87   ERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRF 142
             +F+I S  G ++L+  LDYE   +Y   + A D+    + ++ T+NI +++ ND  P F
Sbjct: 1256 RQFAIDSTSGQVALIGKLDYEATPAYSLVIEAVDSGTVSLNSTCTLNIDILDENDNTPSF 1315

Query: 143  RYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTL--SLRGPY-EKMFSIN-DSGH 198
              P+  LF+    L ++  G ++  V A D D GD   L  S+ G      FSI+ ++G 
Sbjct: 1316 --PKTTLFVD--VLENMRIGELVSSVTATDSDSGDNADLHYSITGTNNHGTFSISPNTGS 1371

Query: 199  ISIVDLSALNTSTI-QLVVVATDTGNPPRQASVPAIMH 235
            I +       T ++ +L + A D G PPR +++  ++H
Sbjct: 1372 IFLAKKLDFETKSLYKLNITAKDQGRPPRSSTMSVVIH 1409



 Score = 54.7 bits (130), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 33/102 (32%), Positives = 49/102 (48%), Gaps = 5/102 (4%)

Query: 77   VKYWLSNDYGERFSIS-RQGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNV 135
            V Y + +   + F I    GD+   + LD E    Y   V A D L ++   +NI+V +V
Sbjct: 1775 VTYTIISGADDSFRIDPESGDLIATRRLDRERRSKYSLLVRADDGLQSSDMRINITVSDV 1834

Query: 136  NDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGD 177
            ND  P+F  P Y   +P     D  PGS++  + A D D G+
Sbjct: 1835 NDHTPKFSRPVYSFDIPE----DTIPGSLVAAILATDDDSGE 1872



 Score = 54.3 bits (129), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 58/198 (29%), Positives = 88/198 (44%), Gaps = 24/198 (12%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLS-NDYGERFSISRQGDISLM 100
            F +  Y V+  E+ PVN     V     +   +  + Y ++  + G+ F I   G + + 
Sbjct: 996  FDQLSYEVTLSESEPVNSRFFKVQASDKDSGANGEIAYTIAEGNTGDAFGIFPDGQLYIK 1055

Query: 101  QCLDYETEDSYRFTVYATDTLMTT-SATVNISVV--NVNDWDPRFRYPQYELFLPHIPLA 157
              LD E +D Y   V A+D  +   SATVN++V+  +VND  P F    Y  +      A
Sbjct: 1056 SELDRELQDRYVLMVVASDRAVEPLSATVNVTVILEDVNDNRPLFNSTNYTFYFEEEQRA 1115

Query: 158  DLTPGSVIGKVEAADGDKGD----RVTLSLRGPYEKMFSINDSGHIS---IVDLSAL--- 207
                GS +GKV A D D G     R +  +  P  ++ +I  SG I+     D  +L   
Sbjct: 1116 ----GSFVGKVSAVDKDFGPNGEVRYSFEMVQPDFELHAI--SGEITNTHQFDRESLMRR 1169

Query: 208  -NTSTIQLVVVATDTGNP 224
              T+     V+ATD G P
Sbjct: 1170 RGTAVFTFTVIATDQGLP 1187



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 51/176 (28%), Positives = 79/176 (44%), Gaps = 34/176 (19%)

Query: 89   FSISRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYP 145
            F++S  G++ + Q LD ET++ +   + ATD+    +T + T+N+ V +VND  P F   
Sbjct: 2308 FTLSASGELRVTQSLDRETKEHFVLMITATDSGSPALTGTGTINVIVDDVNDNVPTFASK 2367

Query: 146  QYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDS-GHI---SI 201
             Y   +P     D   G+ +  V A+D D      + + G     F+IN S G I   ++
Sbjct: 2368 AYFTTIPE----DAPTGTDVLLVNASDADASTNAVIRIIGG-NSQFTINPSTGQIITSAL 2422

Query: 202  VDLSALNTSTIQLVVVATDTG--------------------NPPRQASVPAIMHFP 237
            +D    +  T  LVVV +DTG                    NPPR    P + H P
Sbjct: 2423 LDRETKDNYT--LVVVCSDTGSPEPLSSSTSVLVTVTDVNDNPPRFQHHPYVTHIP 2476



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 51/193 (26%), Positives = 97/193 (50%), Gaps = 12/193 (6%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRDLR--VKYWLS-NDYGERFSISR-QGDISLM 100
           FS+  YS    EN+ + Y + +V+ +   DL   + Y ++  D    F+I++  G ++  
Sbjct: 793 FSQVAYSFVVFENMALGYHVGSVSAST-MDLNSNITYLITTGDQKGMFAINQVTGQLTTA 851

Query: 101 QCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLT 160
             +D E +  Y+  V A+   +T    VNI+V ++ND  P F      + +    + +  
Sbjct: 852 NVIDREEQSFYQLKVVASGGTVTGDTMVNITVKDLNDNSPHFLQAIESVNV----VENWQ 907

Query: 161 PGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIND-SGHISIVDLSALNTSTIQLVVV 217
            G  I + +A D D+G    V  SL+   + +F+IN+ +G IS++    ++  + Q+ ++
Sbjct: 908 AGHSIFQAKAVDPDEGVNGMVLYSLKQNPKNLFAINEKNGTISLLGPLDVHAGSYQIEIL 967

Query: 218 ATDTGNPPRQASV 230
           A+D G P   +SV
Sbjct: 968 ASDMGVPQLSSSV 980



 Score = 52.0 bits (123), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 49/149 (32%), Positives = 70/149 (46%), Gaps = 12/149 (8%)

Query: 95   GDISLMQCLDYETEDSYRFTVYATDTL----MTTSATVNISVVNVNDWDPRFRYPQYELF 150
            G I     LD ET+D+Y   V  +DT     +++S +V ++V +VND  PRF   Q+  +
Sbjct: 2415 GQIITSALLDRETKDNYTLVVVCSDTGSPEPLSSSTSVLVTVTDVNDNPPRF---QHHPY 2471

Query: 151  LPHIPLADLTPGSVIGKVEAADGDKGDRVTL--SLRGPYEKMFSINDSGHISIVDLSALN 208
            + HIP   L PGS +  V   D D G    L  SL G   + F I D    +I+    LN
Sbjct: 2472 VTHIPSPTL-PGSFVFAVTVTDADIGPNSELHYSLSGRNSEKFHI-DPLRGAIMATGPLN 2529

Query: 209  -TSTIQLVVVATDTGNPPRQASVPAIMHF 236
              S +   V   D G+ P+  S    + F
Sbjct: 2530 GASEVTFSVHVKDGGSFPKTDSTTVTVRF 2558



 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 73/237 (30%), Positives = 104/237 (43%), Gaps = 22/237 (9%)

Query: 11  ITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNE-YSVSALENLPVNYVLLTVTT 69
           I L + A       + + A L+V+    +  +  FS+ E Y VS +EN P    LL +  
Sbjct: 548 IVLNISARDQGVHPKVSYAQLVVTLLDVNDEKPVFSQPEGYDVSVVENAPTGTELLVLRA 607

Query: 70  NKPRDL----RVKYWLSNDYGERFSISR---QGDISLMQCLDYETEDSYRFTVYATDTL- 121
               DL     V++ L     +R S       G +S +  LD E +  Y   V ATD   
Sbjct: 608 TD-GDLGDNGTVRFSLQEAETDRRSFRLDPVSGRLSTISSLDREDQAFYSLLVLATDMGS 666

Query: 122 --MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRV 179
              ++ A +N+S++++ND  P F   QY     HI   +   GS I  V A D D G   
Sbjct: 667 PPQSSMARINVSLLDINDNSPVFYPVQY---FAHIK-ENEPGGSYITTVSATDPDLGTNG 722

Query: 180 TL--SLRGPYEKMFSIN-DSGHISI-VDLSALNTSTIQLVVVATDTGN--PPRQASV 230
           T+  S+       F +N  SG IS  + L     +  QL +VATD GN   P QA V
Sbjct: 723 TVKYSISAGDRSRFQVNAQSGVISTRMALDREEKTAYQLQIVATDGGNLQSPNQAIV 779



 Score = 45.8 bits (107), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 51/192 (26%), Positives = 88/192 (45%), Gaps = 18/192 (9%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGERFSIS-RQGDISLM 100
            F  ++Y  + LEN P    ++ +     +   +  + Y + +   + F I    G I+  
Sbjct: 3194 FLSDDYFPTVLENAPSGTTVIHLNATDADSGTNAVIAYTVQSSDSDLFVIDPNTGVITTQ 3253

Query: 101  QCLDYETEDSYRFTVYA---TDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLA 157
              LD+ET+ SY  TV A    D    + ATVN+ +   N++ PRF    Y     +  ++
Sbjct: 3254 GFLDFETKQSYHLTVKAFNVPDEERCSFATVNVQLKGTNEYVPRFVSKLY-----YFEIS 3308

Query: 158  DLTP-GSVIGKVEAAD---GDKGDRVTLSLRGPYEKMFSIN-DSGHISIVD-LSALNTST 211
            +  P G+V+G+V A+D   G  G+   L      +K F IN  +G I +   L       
Sbjct: 3309 EAAPKGTVVGEVFASDRDLGTDGEVHYLIFGNSRKKGFQINKKTGQIYVSGILDREKEER 3368

Query: 212  IQLVVVATDTGN 223
            + L V+A ++G+
Sbjct: 3369 VSLKVLAKNSGS 3380



 Score = 43.9 bits (102), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 48/180 (26%), Positives = 83/180 (46%), Gaps = 14/180 (7%)

Query: 6    DFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLL 65
            D  Q   + V A    N    + AT+ ++    +    +FS++  S +  E+  +  ++ 
Sbjct: 3050 DLNQNFFITVTAKDKGNPPLSSQATVQITVTEENYHTPEFSQSHMSATIPESHSIGSIVR 3109

Query: 66   TVTTNKPRDLR----VKYWLSNDYGER-FSI-SRQGDISLMQCLDYETEDSYRFTVYATD 119
            TV+  + RD      +KY +S+   E  F+I S  G ++L + LDYE    +  T+ ATD
Sbjct: 3110 TVSA-RDRDTAMNGLIKYSISSGNEEGIFAINSSTGVLTLAKALDYELCQKHEMTISATD 3168

Query: 120  ---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG 176
                  T   +V ++V++VND  P F    Y    P + L +   G+ +  + A D D G
Sbjct: 3169 GGWVARTGYCSVTVNVIDVNDNSPVFLSDDY---FPTV-LENAPSGTTVIHLNATDADSG 3224



 Score = 40.8 bits (94), Expect = 0.99,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 55/108 (50%), Gaps = 7/108 (6%)

Query: 89   FSISRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYP 145
            FS+S  G +S  + +D E    +  +V   D+    M+++ TV+I+V++ ND   + R  
Sbjct: 3558 FSLSTAGVLSTTREIDREQIADFYLSVVTKDSGVPQMSSTGTVHITVIDQNDNPSQSR-- 3615

Query: 146  QYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSI 193
              E+F+ +    +L PG ++G V+  D D  D    SL      +FSI
Sbjct: 3616 SVEIFVNY--YGNLFPGGILGSVKPQDPDVLDSFHCSLTSGVTSLFSI 3661


>gi|402870407|ref|XP_003899216.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 4 [Papio anubis]
          Length = 4928

 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 79/270 (29%), Positives = 121/270 (44%), Gaps = 44/270 (16%)

Query: 2    INEDD-----FLQPITLV---VRAIQYDNQDRYALATLIVSKAGTSLRELQ--------- 44
            +NEDD     FL P+T V    R + Y+ Q  Y L T+     G     ++         
Sbjct: 1880 VNEDDEDGIFFLNPVTGVFNLTRVLDYEVQQYYIL-TVRAEDGGGQFTAIRVYFNILDVN 1938

Query: 45   -----FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWL-SNDYGERFSISRQG 95
                 FS N YS S +ENLPV   +L        D    ++ Y + S D   +F++ + G
Sbjct: 1939 DNPPIFSLNSYSTSLMENLPVGSTVLVFNVTDADDGINSQLAYSIASGDSLGQFTVDKNG 1998

Query: 96   DISLMQCLDYETEDSYRFTVYATD------TLMTTSATVNISVVNVNDWDPRFRYPQYEL 149
             + +++ LD E++  Y   V   D      +  T++A V+I +++VND  P F  P+   
Sbjct: 1999 VLKVLKALDRESQSFYNLVVQVHDLPQIPASRFTSTAQVSIILLDVNDNPPTFLSPK--- 2055

Query: 150  FLPHIPLADLTP-GSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIND-SGHISIV-DL 204
             L +IP    TP  +V+ K +A+D D G    +  +L  P    FSI    G + +  +L
Sbjct: 2056 -LTYIPXN--TPIDTVVFKAQASDPDSGPNSYIEYTLLNPLGNKFSIGTIDGEVRLTGEL 2112

Query: 205  SALNTSTIQLVVVATDTGNPPRQASVPAIM 234
                 S   L VVATD G P   +S   I+
Sbjct: 2113 DREEVSNYTLTVVATDKGQPSLSSSTEVIV 2142



 Score = 58.2 bits (139), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 61/192 (31%), Positives = 92/192 (47%), Gaps = 24/192 (12%)

Query: 50   YSVSALENLPVNYVLLTVTTNKPRDLRV----KYWLSNDYGERFSIS-RQGDISLMQCLD 104
            +S    EN P+ Y +  VTT+   D+ +    +Y +  D    F+I+   GDI + + L+
Sbjct: 2777 FSAHVPENSPLGYTVTRVTTSD-EDIGINAISRYSIM-DTSLPFTINPSTGDIVISRPLN 2834

Query: 105  YETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSV 164
             E  D YR  V A D+  T S  V I V +VND  PRF  P Y L  P   L ++  GS 
Sbjct: 2835 REDTDRYRIRVSAHDSGWTVSTDVTIFVTDVNDNAPRFGRPSYYLDCPE--LTEI--GSK 2890

Query: 165  IGKVEAADGDKGD--RVTLSLRGPYEKMFSIN-DSGHI---------SIVDLSALNTSTI 212
            + +V A D D+G   +V   ++   E  F IN  +G I         ++   S +N +  
Sbjct: 2891 VTQVFATDPDEGSNGQVFYFIKSQSE-YFRINATTGEIFNKQILKYQNVTGFSNVNINRH 2949

Query: 213  QLVVVATDTGNP 224
              +V ++D GNP
Sbjct: 2950 SFIVTSSDRGNP 2961



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 44/149 (29%), Positives = 77/149 (51%), Gaps = 12/149 (8%)

Query: 95   GDISLMQCLDYETEDSYRFTVYATDTL---MTTSATVNISVVNVNDWDPRFRYPQYELFL 151
            G ++L+  LDYE   +Y   + A D+    + ++ T+NI +++ ND  P F  P+  LF+
Sbjct: 1265 GQVALIGKLDYEATPAYSLVIQAVDSGTIPLNSTCTLNIDILDENDNTPSF--PKSTLFV 1322

Query: 152  PHIPLADLTPGSVIGKVEAADGDKGDRVTL--SLRGPY-EKMFSIN-DSGHISIVDLSAL 207
                L ++  G ++  V A D D GD   L  S+ G      FSI+ ++G I +      
Sbjct: 1323 D--VLENMRIGELVSSVTATDSDSGDNADLYYSITGTNNHGTFSISPNTGSIFLAKKLDF 1380

Query: 208  NTSTI-QLVVVATDTGNPPRQASVPAIMH 235
             T ++ +L + A D G PPR +++  ++H
Sbjct: 1381 ETQSLYKLNITAKDQGRPPRSSTMSVVIH 1409



 Score = 55.5 bits (132), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 55/182 (30%), Positives = 88/182 (48%), Gaps = 16/182 (8%)

Query: 57   NLPVNYVLLTVTTNKPR---DLRVKYWLSNDYGERFSISR-QGDISLMQCLDYETEDSYR 112
            N P++ V+     + P    +  ++Y L N  G +FSI    G++ L   LD E   +Y 
Sbjct: 2062 NTPIDTVVFKAQASDPDSGPNSYIEYTLLNPLGNKFSIGTIDGEVRLTGELDREEVSNYT 2121

Query: 113  FTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVE 169
             TV ATD     +++S  V + V+++ND +P F    Y++ +    L     G+ I +V 
Sbjct: 2122 LTVVATDKGQPSLSSSTEVIVMVLDINDNNPIFAQTLYKVEINENTLT----GTDIIQVF 2177

Query: 170  AADGDKGDRVTLS---LRGPYEKMFSIND-SGHISIVD-LSALNTSTIQLVVVATDTGNP 224
            AADGD+G    +    + G   + F I+  +G I++   L    T T  L V A D G+ 
Sbjct: 2178 AADGDEGTNGQVRYGIVNGNTNQEFRIDSVTGAITVAKPLDREKTPTYHLTVQAADRGST 2237

Query: 225  PR 226
            PR
Sbjct: 2238 PR 2239



 Score = 54.3 bits (129), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 58/198 (29%), Positives = 88/198 (44%), Gaps = 24/198 (12%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLS-NDYGERFSISRQGDISLM 100
            F +  Y V+  E+ PVN     V     +   +  + Y ++  + G+ F I   G + + 
Sbjct: 996  FDQLSYEVTLSESEPVNSRFFKVQASDKDSGANGEIAYTIAEGNTGDAFGIFPDGQLYIK 1055

Query: 101  QCLDYETEDSYRFTVYATDTLMTT-SATVNISVV--NVNDWDPRFRYPQYELFLPHIPLA 157
              LD E +D Y   V A+D  +   SATVN++V+  +VND  P F    Y  +      A
Sbjct: 1056 SELDRELQDRYVLMVVASDRAVEPLSATVNVTVILEDVNDNRPLFNSTNYTFYFEEEQRA 1115

Query: 158  DLTPGSVIGKVEAADGDKGD----RVTLSLRGPYEKMFSINDSGHIS---IVDLSAL--- 207
                GS +GKV A D D G     R +  +  P  ++ +I  SG I+     D  +L   
Sbjct: 1116 ----GSFVGKVSAVDKDFGPNGEVRYSFEMVQPDFELHTI--SGEITNTYQFDRESLMRR 1169

Query: 208  -NTSTIQLVVVATDTGNP 224
              T+     V+ATD G P
Sbjct: 1170 RGTAVFSFTVIATDQGLP 1187



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 56/190 (29%), Positives = 95/190 (50%), Gaps = 15/190 (7%)

Query: 56   ENLPVNYVLLTVTTNKPRDLRVKYWL-SNDYGERFSISR-QGDISLMQCLDYETEDSYRF 113
            EN PV+ ++ T+  +  R   + Y++ S + G  F I +  G +S+ Q LD+E    Y  
Sbjct: 2578 ENQPVSSLVTTIVGSSLRGEPMSYYIASGNLGNTFQIDQLTGQVSISQPLDFEKIQKYVV 2637

Query: 114  TVYATDTLM---TTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEA 170
             + A D      ++   ++I+V++VND  P F+    + F+  I L +L+P  ++  V A
Sbjct: 2638 WIEARDGGFPPFSSYEKLDITVLDVNDNAPIFKE---DPFISEI-LENLSPRKIL-TVSA 2692

Query: 171  ADGDKGDRVTLS---LRGPYEKMFSINDS-GHI-SIVDLSALNTSTIQLVVVATDTGNPP 225
             D D G    L    + G  E  FSIN + G I S+  L     S   L + ++D G+P 
Sbjct: 2693 VDKDSGPNGQLDYEIVNGNMENSFSINHATGEIRSVRPLDREKVSYYVLTIKSSDKGSPS 2752

Query: 226  RQASVPAIMH 235
            + ASV  +++
Sbjct: 2753 QSASVKVMIN 2762



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/101 (32%), Positives = 48/101 (47%), Gaps = 5/101 (4%)

Query: 77   VKYWLSNDYGERFSIS-RQGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNV 135
            V Y + +   + F I    GD+   + LD E    Y   V A D L ++   +NI+V +V
Sbjct: 1775 VTYTIISGADDSFRIDPESGDLIATRRLDRERRSKYSLLVRADDGLQSSDVRINITVSDV 1834

Query: 136  NDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG 176
            ND  P+F  P Y   +P     D  PGS++  + A D D G
Sbjct: 1835 NDHTPKFSRPVYSFDIPE----DTIPGSLVAAILATDDDSG 1871



 Score = 51.6 bits (122), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 51/193 (26%), Positives = 96/193 (49%), Gaps = 12/193 (6%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRDLR--VKYWLS-NDYGERFSISR-QGDISLM 100
           FS+  YS    EN+ + Y + +V+ +   DL   + Y ++  D    F+I++  G ++  
Sbjct: 793 FSQVAYSFVVFENVALGYHVGSVSAST-MDLNSNISYLITTGDQKGMFAINQVTGQLTTA 851

Query: 101 QCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLT 160
             +D E +  Y+  V A+   +T    VNI+V ++ND  P F      + +    + +  
Sbjct: 852 NVIDREEQSFYQLKVVASGGTVTGDTMVNITVKDLNDNSPHFLQAIESVNV----VENWQ 907

Query: 161 PGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIND-SGHISIVDLSALNTSTIQLVVV 217
            G  I + +A D D+G    V  SL+   + +F+IN+ +G IS++    +   + Q+ ++
Sbjct: 908 AGHSIFQAKAVDPDEGVNGMVLYSLKQNPKNLFAINEKNGTISLLGPLDVQAGSYQIEIL 967

Query: 218 ATDTGNPPRQASV 230
           A+D G P   +SV
Sbjct: 968 ASDMGVPQLSSSV 980



 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 48/149 (32%), Positives = 69/149 (46%), Gaps = 12/149 (8%)

Query: 95   GDISLMQCLDYETEDSYRFTVYATDTL----MTTSATVNISVVNVNDWDPRFRYPQYELF 150
            G I     LD ET+D+Y   V  +D      +++S +V ++V +VND  PRF   Q+  +
Sbjct: 2415 GQIITSALLDRETKDNYTLVVVCSDAGYPEPLSSSTSVLVTVTDVNDNPPRF---QHHPY 2471

Query: 151  LPHIPLADLTPGSVIGKVEAADGDKGDRVTL--SLRGPYEKMFSINDSGHISIVDLSALN 208
            + HIP   L PGS +  V   D D G    L  SL G   + F I D    +I+    LN
Sbjct: 2472 VTHIPSPTL-PGSFVFAVTVTDADIGPNSELHYSLSGRNSEKFHI-DPLRGAIMAAGPLN 2529

Query: 209  -TSTIQLVVVATDTGNPPRQASVPAIMHF 236
              S +   V   D G+ P+  S    + F
Sbjct: 2530 GASEVTFSVHVKDGGSFPKTDSTTVTVRF 2558



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 75/237 (31%), Positives = 105/237 (44%), Gaps = 22/237 (9%)

Query: 11  ITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNE-YSVSALENLPVNYVLLTVTT 69
           I L + A       + + A L+V+    +  +  FS+ E Y VS +EN P    LL +  
Sbjct: 548 IVLNISARDQGVHPKVSYAQLVVTLLDVNDEKPVFSQPEGYDVSVVENAPTGTELLMLRA 607

Query: 70  NKPRDL----RVKYWLSNDYGERFSISR---QGDISLMQCLDYETEDSYRFTVYATD--T 120
               DL     V++ L     +R S       G +S +  LD E +  Y   V ATD  T
Sbjct: 608 TD-GDLGDNGTVRFSLQEAETDRRSFRLDPVSGRLSTISSLDREEQAFYSLLVLATDLGT 666

Query: 121 LMTTSAT-VNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRV 179
              +S T +N+S++++ND  P F   QY     HI   +   GS I  V A D D G   
Sbjct: 667 PPQSSMTRINVSLLDINDNSPVFYPVQY---FAHIK-ENEPGGSYITTVSATDPDLGTNG 722

Query: 180 TL--SLRGPYEKMFSIN-DSGHISI-VDLSALNTSTIQLVVVATDTGN--PPRQASV 230
           T+  S+       F +N  SG IS  + L     +  QL +VATD GN   P QA V
Sbjct: 723 TVKYSISAGDRSRFQVNTQSGVISTRMALDREEKTAYQLQIVATDGGNLQSPNQAIV 779



 Score = 47.8 bits (112), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 48/176 (27%), Positives = 76/176 (43%), Gaps = 34/176 (19%)

Query: 89   FSISRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYP 145
            F++S  G++ + Q LD ET++ +   + A D     +T + T+++ V +VND  P F   
Sbjct: 2308 FTLSASGELGVTQSLDRETKEQFVLMITAIDGGSPALTGTGTISVIVDDVNDNVPTFASK 2367

Query: 146  QYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDS-GHI---SI 201
             Y   +P     D   G+ +  V A+D D      + + G     F+IN S G I   ++
Sbjct: 2368 AYFTTIPE----DAPTGTDVLLVNASDADASTNAVVRIIGG-NSQFTINPSTGQIITSAL 2422

Query: 202  VDLSALNTSTIQLVVVATDTG--------------------NPPRQASVPAIMHFP 237
            +D    +  T  LVVV +D G                    NPPR    P + H P
Sbjct: 2423 LDRETKDNYT--LVVVCSDAGYPEPLSSSTSVLVTVTDVNDNPPRFQHHPYVTHIP 2476



 Score = 44.3 bits (103), Expect = 0.097,   Method: Compositional matrix adjust.
 Identities = 43/161 (26%), Positives = 74/161 (45%), Gaps = 16/161 (9%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGERFSIS-RQGDISLM 100
            F  ++Y  + LEN P    ++ +     +   +  + Y + +   + F I    G I+  
Sbjct: 3194 FLSDDYFPTVLENAPSGTTVIHLNATDADSGTNAVIAYTVQSSDSDLFVIDPNTGVITTQ 3253

Query: 101  QCLDYETEDSYRFTVYA---TDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLA 157
              LD+ET+ SY  TV A    D    + ATVN+ +   N++ PRF    Y     +  ++
Sbjct: 3254 GFLDFETKQSYHLTVKAFNVPDEERCSFATVNVQLKGTNEYVPRFVSKLY-----YFEIS 3308

Query: 158  DLTP-GSVIGKVEAAD---GDKGDRVTLSLRGPYEKMFSIN 194
            +  P G+++G+V A+D   G  G+   L      +K F IN
Sbjct: 3309 EAAPKGTIVGEVFASDRDLGTDGEVHYLIFGNSRKKGFQIN 3349



 Score = 40.0 bits (92), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 55/108 (50%), Gaps = 7/108 (6%)

Query: 89   FSISRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYP 145
            FS+S  G +S  + +D E    +  +V   D+    M+++ TV+I+V++ ND   + R  
Sbjct: 3558 FSLSTVGVLSTTREIDREQIADFYLSVVTKDSGVPQMSSTGTVHITVIDQNDNPSQSR-- 3615

Query: 146  QYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSI 193
              E+F+ +    +L PG ++G V+  D D  D    SL      +FSI
Sbjct: 3616 TVEIFVNY--YGNLFPGGILGSVKPQDPDVLDSFHCSLTSGVTSLFSI 3661


>gi|241121657|ref|XP_002403288.1| protocadherin fat, putative [Ixodes scapularis]
 gi|215493397|gb|EEC03038.1| protocadherin fat, putative [Ixodes scapularis]
          Length = 2933

 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 64/189 (33%), Positives = 97/189 (51%), Gaps = 14/189 (7%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWL-SNDYGERFSIS-RQGDISLMQC 102
            F +  YSVS  ENLP +  ++TV  + P+  ++ Y + S +  E F++    G + +++ 
Sbjct: 901  FPRQFYSVSVPENLPPDVPVITVQADSPKGRQLIYSIVSGNTNEEFAVDFNAGVVYVVEQ 960

Query: 103  LDYETEDSYRFTVYATDTLMT--TSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLT 160
            LDYET   Y+ T+ ATD++    +   V I+V +VND+ P F  P Y     +  +++ T
Sbjct: 961  LDYETHQKYQLTLRATDSVTGAFSDVLVGITVEDVNDFPPMFSQPSY-----NTSVSEAT 1015

Query: 161  PGSV-IGKVEAADGDKG--DRVTLSLRGPYEKMFSIND-SGHISI-VDLSALNTSTIQLV 215
            P +  I KV A+D D G   RV  SL       F I+   G I + V L         LV
Sbjct: 1016 PYTTSILKVHASDRDTGANARVQYSLEASALSTFHIDPVEGVIDLRVPLDHEAQPLYHLV 1075

Query: 216  VVATDTGNP 224
            V ATD G+P
Sbjct: 1076 VTATDAGSP 1084



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 60/190 (31%), Positives = 88/190 (46%), Gaps = 21/190 (11%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDLR---VKYWLSND-YGERFSISR-QGDISL 99
            F    Y  S  EN      +  +T +    L+    +++  ND   + F +    G ++ 
Sbjct: 1535 FDSASYRASVAENAEEGCAVAKLTAHDADRLQKITYEFYEGNDPAADIFRVDAITGTVTT 1594

Query: 100  MQCLDYETEDSYRFTVYATDT-LMTTSAT--VNISVVNVNDWDPRFRYPQYELFLPHIPL 156
            +  LD E   SY FTV A D  L   SAT  V + VV+VND  P F  P+Y+  +    L
Sbjct: 1595 LVALDREAVPSYNFTVSARDDGLPPRSATTWVFVEVVDVNDNAPAFARPRYDAAI----L 1650

Query: 157  ADLTPGSVIGKVEAADGDKGDRVTLSL---RGPYEKMFSINDSGHISI---VDLSALNTS 210
             D  PG+VI  +E +D D G    L L    G  E+ F +  +G + +   +D  A  T+
Sbjct: 1651 EDAVPGTVIVTLETSDPD-GVGAGLDLYVVSGDPEERFGVRSTGEVFVGRPLDREA--TA 1707

Query: 211  TIQLVVVATD 220
            +  L VVATD
Sbjct: 1708 SYFLEVVATD 1717



 Score = 51.2 bits (121), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 71/232 (30%), Positives = 104/232 (44%), Gaps = 19/232 (8%)

Query: 13   LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNY-VLLTVTTNK 71
            L V+A  +      +LATL+V     +    +FS+  Y     E   V   VL  + T++
Sbjct: 1919 LTVQASDHGTPQLSSLATLLVVVQDVNDNPPEFSRKFYHAVVSEASAVGVEVLKVLATSR 1978

Query: 72   PRDL--RVKYWLS--NDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDT---LMT 123
               L   V Y+ S  N+ G  FSI ++ G + + + LDYE    Y  TV A D     ++
Sbjct: 1979 DSGLNAEVTYFFSAGNELGH-FSIDAKTGSVKVAKPLDYEDVRDYFLTVLARDGGLPALS 2037

Query: 124  TSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS- 182
              A+VN+SV + ND  P F  P Y   +      D   G  I +V A+D D      L  
Sbjct: 2038 NQASVNVSVTDYNDCPPVFGLPVYNAVVRE----DARVGDRIIQVIASDADSAANAALQY 2093

Query: 183  --LRGPYEKMFSIN-DSGHISI-VDLSALNTSTIQLVVVATDTGNPPRQASV 230
              +RG     F+I+ ++G+IS+   L     S   L V  TD G PP  + V
Sbjct: 2094 AVVRGDRHGQFAIDKETGYISVAASLDREMISNYVLEVECTDGGTPPLSSKV 2145



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 53/162 (32%), Positives = 77/162 (47%), Gaps = 18/162 (11%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVT-TNKPRDL--RVKYWL-SNDYGERFSISRQ-GDISL 99
            F+   Y  +  EN    + + TVT T+K R     V Y + S+D    F I    G+I  
Sbjct: 1209 FTHTVYEAALPENRDAGFPVATVTATDKDRGHFGHVTYAIRSDDCATHFRIDNATGEIFT 1268

Query: 100  MQCLDYETEDSYRFTVYATDTLMTTSAT-VNISVVNVNDWDPRFRYPQYELFLPHIPLAD 158
             + LD E+   Y   V ATD     + T V ++V +VND +P+F   +Y + +      +
Sbjct: 1269 TKPLDRESRHLYLIPVSATDGGGRLAFTMVRVTVTDVNDNEPQFAVSEYRVNIQ----VN 1324

Query: 159  LTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSGHIS 200
             T G+ I KV A D DKG   TL         +SI+DSG +S
Sbjct: 1325 TTVGTTILKVRAFDKDKGMAATL--------QYSIHDSGSLS 1358



 Score = 48.1 bits (113), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 45/156 (28%), Positives = 69/156 (44%), Gaps = 11/156 (7%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVK---YWLSNDYGERFSISRQGDISLMQ 101
            F++  Y  + LE+     V++T+ T+ P  +      Y +S D  ERF +   G++ + +
Sbjct: 1640 FARPRYDAAILEDAVPGTVIVTLETSDPDGVGAGLDLYVVSGDPEERFGVRSTGEVFVGR 1699

Query: 102  CLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQY-ELFLPHIPLADLT 160
             LD E   SY   V ATD +   +  + I V++ ND  P     +Y EL    I +    
Sbjct: 1700 PLDREATASYFLEVVATDGVFVATTQLAIDVLDANDNPPVCLKSKYTELVSESIAV---- 1755

Query: 161  PGSVIGKVEAADGDKGDRVTLS--LRGPYEKMFSIN 194
              + I  VEA D D+     L   L G     F IN
Sbjct: 1756 -NTYILTVEATDADENRNAQLRYYLSGKGSDDFFIN 1790



 Score = 47.4 bits (111), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 42/153 (27%), Positives = 71/153 (46%), Gaps = 6/153 (3%)

Query: 32  IVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGE-RFS 90
           +VS+   SL   Q  + E     +E+  V +V+ TV         V Y + +   E +F 
Sbjct: 130 VVSRPENSLHPPQIQEVEV-FPTIESDKVGHVVATVRAGDSDGDLVWYNIVDGNQEGKFM 188

Query: 91  ISRQGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELF 150
           I + G I L   LD+ET  +Y  +V  TD +   +  V +S+V+ ND  P F    + + 
Sbjct: 189 IDKIGVIKLASPLDWETTQNYNLSVEVTDGVDKVTTQVLVSIVDANDQWPEFTKSTFRVE 248

Query: 151 LPHIPLADLTPGSVIGKVEAADGDKGDRVTLSL 183
           +      ++ PG+ + ++   D D G R+  SL
Sbjct: 249 ISE----NIPPGTDVLQLSTTDSDGGRRLFYSL 277



 Score = 40.8 bits (94), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 37/147 (25%), Positives = 62/147 (42%), Gaps = 11/147 (7%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKP----RDLRVKYWLSNDYGERFSISRQ-GDISL 99
            F +  YS +  E  P    ++ V  + P    RD      +  +  + F+I R+ G ++L
Sbjct: 1107 FPQLSYSCAVSELAPRGQFVMRVAASDPDSSDRDRLAYSIVGGNEAQAFAIDRKTGIVTL 1166

Query: 100  MQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADL 159
                 +  + +Y   V  TD +  + A V + V+  N   P F +  YE  LP     + 
Sbjct: 1167 SNLHQFPQQPTYLLNVSVTDGVYLSHAKVKVVVLPSNRHSPAFTHTVYEAALPE----NR 1222

Query: 160  TPGSVIGKVEAADGDKGD--RVTLSLR 184
              G  +  V A D D+G    VT ++R
Sbjct: 1223 DAGFPVATVTATDKDRGHFGHVTYAIR 1249



 Score = 38.1 bits (87), Expect = 6.6,   Method: Compositional matrix adjust.
 Identities = 39/186 (20%), Positives = 74/186 (39%), Gaps = 14/186 (7%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTTNKPRD------LRVKYWLSNDYGERFSISRQGDI 97
             F++  YS    E  PV + +L  T + P          ++    N+ G    +     +
Sbjct: 2160 HFAQANYSAIVQEGKPVGFTVLKFTVSDPDSSPNGAPFALEIISGNEDGTFRLVQTDSTL 2219

Query: 98   SLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHI 154
                 LD +    Y   V A+D+    +++   V +  +     D +F      + +   
Sbjct: 2220 RTASKLDPKLRSEYELVVRASDSGAPPLSSECRVFVKAIE----DSQFPPEASPMAVSVT 2275

Query: 155  PLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSGHISIVDLSALNTSTIQL 214
               D  PG V+G+V A D D  D++   L   ++ +FS+ D    +++ L  L+  T  +
Sbjct: 2276 SYLDDFPGGVLGRVRATDRDPYDQLAFELASSHQHLFSV-DREDGTLIALPGLDVGTYSV 2334

Query: 215  VVVATD 220
             V  +D
Sbjct: 2335 NVSVSD 2340


>gi|307210796|gb|EFN87178.1| Protocadherin-like wing polarity protein stan [Harpegnathos saltator]
          Length = 3166

 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 73/244 (29%), Positives = 115/244 (47%), Gaps = 19/244 (7%)

Query: 6    DFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLL 65
            D+ Q    V+     D+  R   A + V+ +  +     F    YSVS  E+ PV   +L
Sbjct: 768  DYKQEKRFVLTVTASDSGGRTDTALVYVNVSDANNFSPVFENAPYSVSVFEDAPVGVTVL 827

Query: 66   TVT---TNKPRDLRVKYWLSNDYGER----FSISRQ-GDISLMQCLDYETEDSYRFTVYA 117
             V+   ++  ++ ++ Y L+ D GE+    FSI+ Q G I+  + LD E   SY  TV A
Sbjct: 828  VVSATDSDVGKNAQITYSLATDSGEQAVNEFSINSQTGAITTTRALDRELVSSYLLTVTA 887

Query: 118  TDTL---MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEA--AD 172
             D     ++ +  V ISV +VND  P F  PQY+  +P     D+  G+ + +V A  AD
Sbjct: 888  RDGGVPPLSDTTDVEISVTDVNDNAPVFEAPQYQGSIPE----DVLVGTSVLRVAATDAD 943

Query: 173  GDKGDRVTLSLRGPYEKMFSINDSGHI--SIVDLSALNTSTIQLVVVATDTGNPPRQASV 230
             D   RV  +L    +  F+I+ +  I  +   L   + +   L  VA D G+P   + V
Sbjct: 944  SDLNGRVKYALEDDGDGAFAIDPTTGIVRTAKSLDRESVARYSLKAVAIDRGSPALSSVV 1003

Query: 231  PAIM 234
            P I+
Sbjct: 1004 PMII 1007



 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 63/235 (26%), Positives = 107/235 (45%), Gaps = 30/235 (12%)

Query: 25  RYALATLIVSKAGTSLRELQFSKNEYSVSALENL-----PVNYVLLTVTTNKPRDLRVKY 79
           R A ATL+V     +    QF++  YS + LE+L     P+   +     +   +  V+Y
Sbjct: 463 RSANATLVVRVLDDNDNYPQFTERTYSAAVLEDLDYTTNPIVARIRATDADAGSNAAVRY 522

Query: 80  WL-SNDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVN 134
            +   +    FSI S  GD++L++ LDYE+  SY+  + A D      + +  + + V +
Sbjct: 523 AIIGGNTQNTFSIDSMSGDVALVKPLDYESTRSYKIVIRAQDGGSPARSNTTQLLVMVRD 582

Query: 135 VNDWDPRFRYPQY-ELFLPHIPLADLTPGSVIGKVEAADGDKGD----RVTLSLR---GP 186
           VND  PRF    + E    ++PL     G  + +V+A D D+G     R T+  R   G 
Sbjct: 583 VNDNAPRFYTSHFQESVSENVPL-----GYSVLRVQAYDADEGKNALIRYTIGARDVTGA 637

Query: 187 YEKMFSI---NDSGHI---SIVDLSALNT-STIQLVVVATDTGNPPRQASVPAIM 234
           + + F I    ++G I     +D    +  S  Q  ++A D+G   +  S   I+
Sbjct: 638 FTENFPITVNTETGWIYTTKQLDREQCSKYSKYQFTIIAADSGEEAKSMSATVIL 692



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 62/233 (26%), Positives = 102/233 (43%), Gaps = 26/233 (11%)

Query: 13  LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTT--- 69
           +V+RA    +  R     L+V     +    +F  + +  S  EN+P+ Y +L V     
Sbjct: 558 IVIRAQDGGSPARSNTTQLLVMVRDVNDNAPRFYTSHFQESVSENVPLGYSVLRVQAYDA 617

Query: 70  NKPRDLRVKYWL-----SNDYGERFSIS---RQGDISLMQCLDYE---TEDSYRFTVYAT 118
           ++ ++  ++Y +     +  + E F I+     G I   + LD E       Y+FT+ A 
Sbjct: 618 DEGKNALIRYTIGARDVTGAFTENFPITVNTETGWIYTTKQLDREQCSKYSKYQFTIIAA 677

Query: 119 DT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDK 175
           D+     + SATV ++V +VND DP F    YE  +      D  PG+ +  V A D D+
Sbjct: 678 DSGEEAKSMSATVILTVTDVNDNDPYFEPKNYEAVVSE----DDPPGTPVTSVTATDPDE 733

Query: 176 GDRVTLSLRGPYEK-MFSI---NDSGHISIVD-LSALNTSTIQLVVVATDTGN 223
             R+   + G   +  FSI   N  G I++   L         L V A+D+G 
Sbjct: 734 DARIHYEITGGNTRGRFSIASQNGRGLITVAQPLDYKQEKRFVLTVTASDSGG 786



 Score = 46.2 bits (108), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 52/207 (25%), Positives = 91/207 (43%), Gaps = 27/207 (13%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWL-------SNDYGERFSI--- 91
           F   EY  S  E +PV   ++TV     +  R+  V+Y +       S  + E  +I   
Sbjct: 366 FEWPEYDASVREGVPVGSTVVTVKATDQDTGRNAEVEYSIVCTTAGGSTAHSEEAAIFRI 425

Query: 92  -SRQGDISLMQCLDYETEDSYRFTVYATD------TLMTTSATVNISVVNVNDWDPRFRY 144
             R G ++    LD E  + Y   +  TD         + +AT+ + V++ ND  P+F  
Sbjct: 426 DPRSGVVTTRTALDREQTEVYTVLLSVTDQATPPSARRSANATLVVRVLDDNDNYPQFTE 485

Query: 145 PQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIND-SGHIS 200
             Y   +  +   D T   ++ ++ A D D G    +    + G  +  FSI+  SG ++
Sbjct: 486 RTYSAAV--LEDLDYTTNPIVARIRATDADAGSNAAVRYAIIGGNTQNTFSIDSMSGDVA 543

Query: 201 IVD-LSALNTSTIQLVVVATDTGNPPR 226
           +V  L   +T + ++V+ A D G+P R
Sbjct: 544 LVKPLDYESTRSYKIVIRAQDGGSPAR 570


>gi|307190371|gb|EFN74430.1| Cadherin-related tumor suppressor [Camponotus floridanus]
          Length = 3233

 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 59/205 (28%), Positives = 104/205 (50%), Gaps = 17/205 (8%)

Query: 44  QFSKNEYSVSALENLPVN-YVLLTVTTNKPRDL--RVKYWLSNDYGERFSISRQ-GDISL 99
           +F++ +Y  + +EN+P   +V     T++   +  +++Y L  D  ERF +    G++  
Sbjct: 588 EFNRQDYKATVMENMPAGTWVTKPHATDQDEGVNGKIRYRLLGDKAERFFVDPDTGEVFT 647

Query: 100 MQCLDYETEDSYRFTVYATDTLMTT--SATVNIS--VVNVNDWDPRFRYPQYELFLPHIP 155
              LD E    Y  T+ A D+  T   ++TVN++  V++VND  PRF  P+Y  ++P + 
Sbjct: 648 TVPLDREQTAVYHLTLVARDSSPTEPRASTVNLTILVMDVNDNAPRFSSPRYTAYVPSL- 706

Query: 156 LADLTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSIN-DSGHISIV-DLSALNTST 211
              + PG  +   +A D D G+  R+   L+G     F I+ D+G I    +LS +   T
Sbjct: 707 ---IKPGDFVFGAKAIDDDDGENSRIVYRLQGKDADRFVIDLDNGVIRAAQELSGVQI-T 762

Query: 212 IQLVVVATDTGNPPRQASVPAIMHF 236
            QL + A+D G  P+  +   ++H 
Sbjct: 763 YQLQIEASDCGPEPQHVTADLMIHL 787



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 59/201 (29%), Positives = 95/201 (47%), Gaps = 19/201 (9%)

Query: 45  FSKNEYSVSALENL--PVNYVLLTVTT----NKPRDLRVKYWLSNDYGERFSI-SRQGDI 97
           F  + Y V  +EN+  P    ++ V        P + +V Y+L     + F I +  GDI
Sbjct: 482 FLDSPYLVHVMENMVPPDGGFVIQVKAYDADTPPYNDQVTYFLKEGDTDLFRINASTGDI 541

Query: 98  SLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHI 154
           SL++ LD E    Y  T+ A DT    +T S  V I V++VND +P F    Y+  +   
Sbjct: 542 SLLRSLDRELMPEYTLTLVAMDTGSPPLTGSGIVRIIVLDVNDHNPEFNRQDYKATV--- 598

Query: 155 PLADLTPGSVIGKVEAADGDKG--DRVTLSLRG-PYEKMFSINDSGHI-SIVDLSALNTS 210
            + ++  G+ + K  A D D+G   ++   L G   E+ F   D+G + + V L    T+
Sbjct: 599 -MENMPAGTWVTKPHATDQDEGVNGKIRYRLLGDKAERFFVDPDTGEVFTTVPLDREQTA 657

Query: 211 TIQLVVVATDTG-NPPRQASV 230
              L +VA D+    PR ++V
Sbjct: 658 VYHLTLVARDSSPTEPRASTV 678



 Score = 55.8 bits (133), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 51/155 (32%), Positives = 74/155 (47%), Gaps = 14/155 (9%)

Query: 28   LATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTT----NKPRDL-RVKYWLS 82
            L TL++S  G +L    F+   + V   EN PVN  +LTV+     N P  + R K    
Sbjct: 1310 LLTLVIS--GKNLYAPTFAAVSHQVRVPENEPVNTTILTVSAVDDDNGPNGIVRYKISAG 1367

Query: 83   NDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDTLMTTS---ATVNISVVNVNDWD 139
            N+  E F  S  G + +++ LDY+    Y+  + ATD         AT+ ++V ++ND  
Sbjct: 1368 NERNEFFVHSITGAVIILKPLDYDLVQEYQLNITATDLGFEPKQAVATLIVNVSDINDNP 1427

Query: 140  PRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGD 174
            P F    YE FLP    +D    S + KV A D D
Sbjct: 1428 PTFNQSIYEAFLPENSPSD----SFVYKVVAQDID 1458



 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 50/193 (25%), Positives = 91/193 (47%), Gaps = 23/193 (11%)

Query: 50   YSVSALENLPVNYVLLTVTTNKP---RDLRVKYWLSNDYGERFSI-SRQGDISLMQCLDY 105
            +SV+  EN  +   ++ +T+  P   ++  V Y  +++ GE+F I +  G++++   LD 
Sbjct: 1010 FSVNVTENAEIGTFVIRITSRDPDIGQNANVSYSFTDNPGEKFFIDALSGNVTVAGYLDR 1069

Query: 106  ETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPG-SV 164
            E +D Y   V A D    T   + I++ + ND  P F    Y    P     +L P  + 
Sbjct: 1070 EEQDEYLLKVVAADGAWLTETALTITIQDQNDNAPEFDENTYHFHFP-----ELQPEVAH 1124

Query: 165  IGKVEAADGDK---GDRVTLSLRGPYEKMFSINDS-GHI--------SIVDLSALNTSTI 212
            +G+V A D DK      ++ +L  P + +F+++ + G +           + S+   +  
Sbjct: 1125 VGQVTAIDYDKQGPNSVISYNLLQPSD-LFAVDPATGDVFSKRTLRYKHSNRSSSPENLY 1183

Query: 213  QLVVVATDTGNPP 225
             L V+ATD G PP
Sbjct: 1184 SLTVIATDNGKPP 1196



 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 44/137 (32%), Positives = 67/137 (48%), Gaps = 12/137 (8%)

Query: 95  GDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHI 154
           G ++L + LD ET++ Y   V A D L      +NI V + ND  P F+   Y   +P  
Sbjct: 11  GQLTLAEALDRETKEKYVLRVRADDGLQHRDIVLNIQVTDTNDNAPTFQSTAYSFDIPE- 69

Query: 155 PLADLTPGSVIGKVEAADGD-KGDRVTLS---LRGPYEKMFSINDSGHISIVDLSALNTS 210
              ++  GS +G+V A D D +G    LS   +      +FS+N S  +  +  ++L+  
Sbjct: 70  ---NVPRGSRVGQVVATDADAEGPNSQLSYVLISDWANDVFSLNPSTGVFTL-TASLDYE 125

Query: 211 TIQ---LVVVATDTGNP 224
            +Q   LVV ATD G P
Sbjct: 126 QVQHYILVVQATDGGVP 142



 Score = 46.6 bits (109), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 46/181 (25%), Positives = 85/181 (46%), Gaps = 13/181 (7%)

Query: 6    DFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVN---Y 62
            D +Q   L + A     + + A+ATLIV+ +  +     F+++ Y     EN P +   Y
Sbjct: 1391 DLVQEYQLNITATDLGFEPKQAVATLIVNVSDINDNPPTFNQSIYEAFLPENSPSDSFVY 1450

Query: 63   VLLTVTTNKPRDLRVKYWLSNDYG-ERFSISRQ-GDISLMQCLDYETEDSYRFTVYA--- 117
             ++    + P+   V+Y +    G + F I  + G+I+     DYE  + Y   + A   
Sbjct: 1451 KVVAQDIDSPKYAVVQYKILGGSGKDHFHIREETGEITSDTSFDYEEVNEYSLDIVAANP 1510

Query: 118  -TDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG 176
             ++  M    TV + +  VN++ P+F  P + + +     AD+  G+ +G V+A D D G
Sbjct: 1511 DSNPQMVGFTTVIVRITGVNEFYPKFIQPVFHMDVSE--SADV--GTSVGLVQATDQDSG 1566

Query: 177  D 177
            +
Sbjct: 1567 E 1567



 Score = 43.5 bits (101), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 46/81 (56%), Gaps = 5/81 (6%)

Query: 71   KPRDLRVKY-WLSNDYGERFSISRQ-GDISLMQCLDYETEDSYRFTVYATDT---LMTTS 125
            KP++ +  Y  +  ++G+ F +  Q GDI   + LD ET  +Y  T+ A DT     T +
Sbjct: 1672 KPQNNQFSYSIIGGNHGQAFKVDPQTGDIETAKQLDRETMPAYDLTIGAIDTGSPPQTGT 1731

Query: 126  ATVNISVVNVNDWDPRFRYPQ 146
            ATV+I +++VND  P F  P+
Sbjct: 1732 ATVHIDLLDVNDNGPVFDPPE 1752



 Score = 38.9 bits (89), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 51/199 (25%), Positives = 84/199 (42%), Gaps = 30/199 (15%)

Query: 50  YSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSN-DYGERFSISRQGDISLMQCLDY 105
           ++   +EN  +   +LTVT    +   + R+ Y ++  D    F ++  G +   + LD 
Sbjct: 169 HAADIVENATIGTPVLTVTAQDLDSGDNGRILYAITGGDEDGNFGVAPNGTLFTRRLLDR 228

Query: 106 ETEDSYRFTVYATDTLMTT----SATVNISVV--NVNDWDPRFRYPQYELFLPHIPLADL 159
           E +  Y   +  TD+ +      S+TV ++VV  +VND  P F  P     + + P    
Sbjct: 229 ERKPLYNLALSVTDSPLPPARPLSSTVQVTVVLLDVNDMSPEFISPTRISIIENAP---- 284

Query: 160 TPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSIND-SGHISIVD--------LSALNTS 210
              +V+  ++A D D+G        G  E M   ND    + +VD        L     S
Sbjct: 285 -SNTVVMAIKAIDRDEG------RNGYVEYMLEDNDLPFTLGLVDGLLRVSGPLDREQKS 337

Query: 211 TIQLVVVATDTGNPPRQAS 229
              L V+A D G P R +S
Sbjct: 338 NYTLAVIARDRGEPSRSSS 356


>gi|328790020|ref|XP_392300.4| PREDICTED: protein dachsous-like [Apis mellifera]
          Length = 3415

 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 73/238 (30%), Positives = 106/238 (44%), Gaps = 27/238 (11%)

Query: 16   RAIQYDNQDRYALATLIVSKAGTSLR-----ELQ--------FSKNEYSVSALENLPVNY 62
            R + Y+ Q R+ L    +   G S       E+Q        F +NEY V   E   ++ 
Sbjct: 994  RRLDYETQQRHGLLIRALDGGGLSANLSLSVEVQDVNDNPPVFERNEYHVEVPEGAKLDS 1053

Query: 63   VLLTVTT---NKPRDLRVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATD 119
             +L VT    +   + R+ Y L      R S +  G I L Q LD E+ D +  TV ATD
Sbjct: 1054 QILQVTAVDLDTGNNARLSYRLQGSTAFRISPN-TGWIYLAQVLDRESSDRHALTVLATD 1112

Query: 120  T---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG 176
                  T S +V ++V++ ND DPRF    Y   L    L +L  G+++G V A+D D G
Sbjct: 1113 NGSPAATASTSVLVTVLDDNDNDPRFEKEFYGFEL----LENLPSGTLVGSVSASDPDLG 1168

Query: 177  DRVTLSLRG-PYEKMFSIN-DSGHISIVDLSALNTSTI-QLVVVATDTGNPPRQASVP 231
                L          F+++ D+G I   +     T  + +LV+ A D G P R A VP
Sbjct: 1169 KNALLRYAVVQANSSFTVDPDTGEIITKEPLDRETKGVHELVLEARDQGTPSRAARVP 1226



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 51/166 (30%), Positives = 83/166 (50%), Gaps = 18/166 (10%)

Query: 77   VKYWLSNDYGERFSI---SRQGDISLMQCLDYETEDSYRFTVYATDTL-----MTTSATV 128
            ++Y L  ++  R S    S  G ++L + LD E    Y   + A+D       + ++ T 
Sbjct: 1491 LRYGLVAEFPPRDSFAVDSLTGALTLAKPLDREERAEYTLILKASDRAPPGERLASTVTA 1550

Query: 129  NISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGD--RVTLSLRGP 186
             I V++ ND DP F  P+    +P  P  DL PG+ + +V A D D GD  RV+  +   
Sbjct: 1551 RIIVLDQNDNDPIFVAPE-STKIPVTP--DLLPGATLVRVVAVDKDAGDNGRVSYVITSA 1607

Query: 187  YEKM-FSIN-DSGHISIVDLSALNTSTIQLVVVATDTGNPPRQASV 230
             E+  FS+  +SG   IV L      + +L + A D G+PPR++++
Sbjct: 1608 NEEARFSVGYESG---IVSLERPMARSTELEITANDHGSPPRKSTL 1650



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 60/244 (24%), Positives = 110/244 (45%), Gaps = 26/244 (10%)

Query: 8    LQPITLVVR---AIQYDNQDRYALATLIVSKAGTSLRELQ------------FSKNEYSV 52
            + P+T ++R    +  + +D+Y L+    +   T   +++            F  +   +
Sbjct: 882  IDPVTGMIRIRVPLDRETRDKYILSVEARNGVTTGYCQVELNVEDVNDNGPTFPTSSVRI 941

Query: 53   SALENLPVNYVLLTVTTNKPR---DLRVKYWLSNDYGERFSI-SRQGDISLMQCLDYETE 108
            S  E+ P++  L       P       ++Y L  +  + F I +R G++ L + LDYET+
Sbjct: 942  SVAESHPLHAPLYVAHATDPDVVPSHPIRYALGQNSNDLFGIDARSGELYLSRRLDYETQ 1001

Query: 109  DSYRFTVYATD-TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGK 167
              +   + A D   ++ + ++++ V +VND  P F   +Y + +P     D    S I +
Sbjct: 1002 QRHGLLIRALDGGGLSANLSLSVEVQDVNDNPPVFERNEYHVEVPEGAKLD----SQILQ 1057

Query: 168  VEAADGDKGDRVTLSLRGPYEKMFSIN-DSGHISIVD-LSALNTSTIQLVVVATDTGNPP 225
            V A D D G+   LS R      F I+ ++G I +   L   ++    L V+ATD G+P 
Sbjct: 1058 VTAVDLDTGNNARLSYRLQGSTAFRISPNTGWIYLAQVLDRESSDRHALTVLATDNGSPA 1117

Query: 226  RQAS 229
              AS
Sbjct: 1118 ATAS 1121



 Score = 52.0 bits (123), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 64/219 (29%), Positives = 98/219 (44%), Gaps = 22/219 (10%)

Query: 32   IVSKAGTSLRELQFSKN-----EYSV-SALENLPVNYVLLTVTTN---KPRDLRVKYWLS 82
            +   A  S+R +  + N     E+S+ S  E   V  VL T+T N       L  ++  +
Sbjct: 2353 LTGTAALSVRVIDINDNQPTFPEHSIISVSEGTAVGTVLTTITANDVDSSPALTYRFGNA 2412

Query: 83   NDYGERFSISR-QGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPR 141
             D G  FSI R  G + L + LD ET   Y   V A+D +   +  + + V ++ND  PR
Sbjct: 2413 TDPGP-FSIDRYGGKVVLRRRLDAETRSEYSLQVIASDGIHEATTDLIVRVTDLNDNAPR 2471

Query: 142  FRYPQYELFLPHIPLADLTPGSVIGKVEAADGD---KGDRVTLSLRGPYEKMFSINDSGH 198
            F+   Y   LP     +L     I  V A D D      RV   L     K FS++ +  
Sbjct: 2472 FQQSAYIATLPEGRGGEL---QEIVTVNATDDDLTEDNSRVRYHLLR-ATKGFSVHPASG 2527

Query: 199  ISIVDLSALNT---STIQLVVVATDTGNPPRQASVPAIM 234
            +  V+ +A+       ++L +VA D G PP  ASV +++
Sbjct: 2528 VVTVNRTAIPRPLPKEVELAIVAEDYGKPP-AASVCSVV 2565



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 58/194 (29%), Positives = 90/194 (46%), Gaps = 19/194 (9%)

Query: 49   EYSVSALENLPVNYVLLTVTTNKPR---DLRVKYWLSNDYGERFSISR-QGDISLMQCLD 104
            +Y  +  E++  +  ++TV    P    + ++ Y ++ +    F +    G ++    LD
Sbjct: 1914 KYVATVSEDVAPDSSVMTVRATDPDQGVNGKITYAIAEETSWLFRVDNLTGVVTTAGPLD 1973

Query: 105  YETEDSYRFTVYATDT----LMTTSATVNISVVNVNDWDPRFR-YPQYELFLPHIPLADL 159
             E + SY+F V ATD+      +++  V I V +VND  P F  YP    F   + +   
Sbjct: 1974 RERQSSYKFLVVATDSGKYDARSSTIPVEIRVSDVNDNAPVFEEYP----FRARVSIG-T 2028

Query: 160  TPGSVIGKVEAADGDKG--DRVTLSLRGPYEK-MFSINDS-GHI-SIVDLSALNTSTIQL 214
             P   I +V A D D+G    +  S     EK  F I+ S G + + + LS  N  T  L
Sbjct: 2029 QPEKNIVRVVATDIDEGLNGEIVYSFLHEQEKPKFRIHPSTGAVTAALSLSQDNGKTYHL 2088

Query: 215  VVVATDTGNPPRQA 228
             VVA D GNPPR A
Sbjct: 2089 EVVARDKGNPPRSA 2102



 Score = 46.2 bits (108), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 47/135 (34%), Positives = 66/135 (48%), Gaps = 13/135 (9%)

Query: 103 LDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADL 159
           LD E +  Y  +V ATD     +    T  + V +VND  P+F   +YE  L    L   
Sbjct: 398 LDREEKPVYDLSVEATDAGTPPLRAVRTFRLIVTDVNDNAPKFARDRYEAHL----LEAS 453

Query: 160 TPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSIND-SGHISI---VDLSALNTSTIQLV 215
            PG+ + KV A D D+G    +         F+I++ SG IS    VD  A + + I LV
Sbjct: 454 EPGTPVLKVTATDLDEGANSAIKYSLLNSTWFTIDETSGLISTQTHVDCEA-DPAPI-LV 511

Query: 216 VVATDTGNPPRQASV 230
           V+ATD+G PP  +S 
Sbjct: 512 VIATDSGRPPLSSSA 526



 Score = 45.4 bits (106), Expect = 0.051,   Method: Compositional matrix adjust.
 Identities = 34/103 (33%), Positives = 52/103 (50%), Gaps = 7/103 (6%)

Query: 93   RQGDISLMQCLDYETEDSYRFTVYATDTLMTTSAT-VNISVVNVNDWDPRFRYPQYELFL 151
            + G ++     DYE  + Y FT+ ATDT   T+A  V + + + +++ P+F    Y   +
Sbjct: 2847 KSGTVTTRAVFDYELRNRYAFTLRATDTGGRTAAVRVRVEIESRDEFYPQFTERMYRFGM 2906

Query: 152  PHIPLADLTPGSVIGKVEAADGDKG--DRVTLSL--RGPYEKM 190
                 A +  G+VIG V A D DKG   RV   L  + PY K+
Sbjct: 2907 RS--GARILAGTVIGHVTATDRDKGPDGRVVYQLTSQHPYFKL 2947



 Score = 45.1 bits (105), Expect = 0.060,   Method: Compositional matrix adjust.
 Identities = 58/247 (23%), Positives = 112/247 (45%), Gaps = 38/247 (15%)

Query: 14   VVRAIQYDNQDRYALATLI------VSKAGTSL---------RELQFSKNEYSVSALENL 58
            + + +  ++ DR+AL  L        + A TS+          + +F K  Y    LENL
Sbjct: 1092 LAQVLDRESSDRHALTVLATDNGSPAATASTSVLVTVLDDNDNDPRFEKEFYGFELLENL 1151

Query: 59   PVNYVLLTVTTNKP---RDLRVKYWLSNDYGERFSISRQ-GDISLMQCLDYETEDSYRFT 114
            P   ++ +V+ + P   ++  ++Y +       F++    G+I   + LD ET+  +   
Sbjct: 1152 PSGTLVGSVSASDPDLGKNALLRYAVVQ-ANSSFTVDPDTGEIITKEPLDRETKGVHELV 1210

Query: 115  VYATDTLMTTSAT---VNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAA 171
            + A D    + A    + I+V++VND  P    PQ ++        +  PG+ + +V A 
Sbjct: 1211 LEARDQGTPSRAARVPLKITVLDVNDNSPEIVDPQGDVVSVR---EEQPPGTEVARVRAL 1267

Query: 172  DGDKGDRVTLSLRGPYEK------MFSIND-SGHI---SIVDLSALNTSTIQLVVVATDT 221
            D D G+  +++     ++      +F+I+  +G I   +++D    N    ++ V ATD 
Sbjct: 1268 DTDLGENASVTYTILKDRDSDGYNVFTIDPITGMIRTKAVLDHEERN--VYRVSVKATDA 1325

Query: 222  GNPPRQA 228
            G PPR +
Sbjct: 1326 GRPPRHS 1332



 Score = 42.4 bits (98), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 54/208 (25%), Positives = 88/208 (42%), Gaps = 39/208 (18%)

Query: 58  LPVNYVLLTVTTNKPRDLRV----------------KYWL-SNDYGERFSIS----RQG- 95
            PV++V +    N PRD +                 +Y + S ++ + F +S    R G 
Sbjct: 110 FPVDHVDVEFPENSPRDAKRALPPAKDPDLGQYSTQRYEIVSGNHEDAFRLSQHRGRDGV 169

Query: 96  ---DISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYEL 149
              D+     LD E    Y   + A D     + +   VN++V +VND  P F   +Y  
Sbjct: 170 LYLDLQNSGSLDREARSRYHLVIEALDGGAPPLRSRLHVNVTVQDVNDNPPIFNQTRYVA 229

Query: 150 FLPHIPLADLTPGSVIGKVEAADGDKGD--RVTLSL---RGPYEKMFSINDSGHISIVD- 203
            +P     + T G+ +  V A D D G+  R+  S+   +   E+MF I+    +  V+ 
Sbjct: 230 SVPE----NATVGTPVLAVNATDSDAGENGRIEYSINRRQSDREEMFRIDPETGMVYVNK 285

Query: 204 -LSALNTSTIQLVVVATDTGNPPRQASV 230
            L   +    +LV+VA D G  P +AS 
Sbjct: 286 ALDFESKERHELVIVARDRGAQPLEASA 313



 Score = 38.1 bits (87), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 51/193 (26%), Positives = 93/193 (48%), Gaps = 27/193 (13%)

Query: 45   FSKNEYSVSALE-NLPVNYVLLTVTTNKPRDL--RVKYWL-SNDYGERFSIS--RQGDIS 98
            F++ +YS + LE N+  ++V+    ++  + +  R+ Y +   +    F+IS    G + 
Sbjct: 2267 FTQTQYSATVLEGNVKGDFVVKLSASDADQGMNGRILYHIVDGNPDNAFTISPPYSGIVR 2326

Query: 99   LMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIP 155
                LD E  + YR T+ ATD     +T +A +++ V+++ND  P F  P++ +    I 
Sbjct: 2327 TNIVLDREIREKYRLTIIATDQGNPQLTGTAALSVRVIDINDNQPTF--PEHSI----IS 2380

Query: 156  LADLTP-GSVIGKVEAADGDKGDRVTLSLR-----GPYEKMFSINDSGHISIV--DLSAL 207
            +++ T  G+V+  + A D D    +T         GP    FSI+  G   ++   L A 
Sbjct: 2381 VSEGTAVGTVLTTITANDVDSSPALTYRFGNATDPGP----FSIDRYGGKVVLRRRLDAE 2436

Query: 208  NTSTIQLVVVATD 220
              S   L V+A+D
Sbjct: 2437 TRSEYSLQVIASD 2449


>gi|322800567|gb|EFZ21553.1| hypothetical protein SINV_02181 [Solenopsis invicta]
          Length = 1368

 Score = 72.8 bits (177), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 77/242 (31%), Positives = 110/242 (45%), Gaps = 31/242 (12%)

Query: 14  VVRAIQYDNQDRYALATLIVSKAGTSLR-------ELQ--------FSKNEYSVSALENL 58
           + + + Y+ Q R+ L  LI +  GT L        E+Q        F +NEY V   E  
Sbjct: 128 LTKRLDYETQQRHGL--LITALDGTGLSSNLSLSVEVQDVNDNPPVFERNEYHVEVPEGA 185

Query: 59  PVNYVLLTVTT---NKPRDLRVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTV 115
            ++  +L VT    +   + R+ Y L      R +    G I L Q LD ET D +  TV
Sbjct: 186 RLDSQILQVTAVDLDTGNNARLSYRLHGSTAFRIN-PITGWIYLAQSLDRETLDRHALTV 244

Query: 116 YATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAAD 172
           +ATD      T SATV + V++ ND DPRF    Y   L    L +L  G+++G+V A D
Sbjct: 245 FATDNGSPAATASATVLVMVLDDNDNDPRFEKDFYAFEL----LENLPSGTLVGRVSAID 300

Query: 173 GDKGDRVTLSLR-GPYEKMFSIN-DSGHISIVD-LSALNTSTIQLVVVATDTGNPPRQAS 229
            D G    L          F+++ D+G I+  + L        +LV+ A D G P R A 
Sbjct: 301 PDIGKNSLLRYAVVQTNSSFAVDPDTGKITTREPLDREAKGVHELVLEARDQGIPSRAAR 360

Query: 230 VP 231
           VP
Sbjct: 361 VP 362



 Score = 55.1 bits (131), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 57/195 (29%), Positives = 92/195 (47%), Gaps = 15/195 (7%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPR---DLRVKYWLSNDYGERFSISRQ-GDISLM 100
           F  +   +S  E+ P++  L       P     L ++Y L  +    F I+ Q G++ L 
Sbjct: 70  FRTSTVRISVPESHPLHEPLYVAHATDPDITPSLPIRYVLGQNGNNLFRINVQTGELYLT 129

Query: 101 QCLDYETEDSYRFTVYATD-TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADL 159
           + LDYET+  +   + A D T ++++ ++++ V +VND  P F   +Y + +P     D 
Sbjct: 130 KRLDYETQQRHGLLITALDGTGLSSNLSLSVEVQDVNDNPPVFERNEYHVEVPEGARLD- 188

Query: 160 TPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSIND-SGHISIVDLSALNTSTIQ---LV 215
              S I +V A D D G+   LS R      F IN  +G I +    +L+  T+    L 
Sbjct: 189 ---SQILQVTAVDLDTGNNARLSYRLHGSTAFRINPITGWIYLA--QSLDRETLDRHALT 243

Query: 216 VVATDTGNPPRQASV 230
           V ATD G+P   AS 
Sbjct: 244 VFATDNGSPAATASA 258



 Score = 54.3 bits (129), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 51/143 (35%), Positives = 70/143 (48%), Gaps = 15/143 (10%)

Query: 94   QGDISLMQCLDYETEDSYRFTVYATDT----LMTTSATVNISVVNVNDWDPRFR-YPQYE 148
            + +  +   LD E + SY F V ATD+      +TS  V I++ +VND  P F  YP   
Sbjct: 947  EDNCRVFDPLDRERQSSYTFFVVATDSGRYDAKSTSIPVEINISDVNDNAPIFEEYP--- 1003

Query: 149  LFLPHIPLADLTPGSVIGKVEAADGDKGDR--VTLSLRGPYEK-MFSINDS-GHISI-VD 203
             F   +P+    PG  I +V A D D G    +  SL    EK  F I+ S G ++  + 
Sbjct: 1004 -FRARVPVG-TQPGQNILRVSAKDADDGANGDIVYSLINEQEKPKFRIHPSTGEVTASLS 1061

Query: 204  LSALNTSTIQLVVVATDTGNPPR 226
            LS  N  T  L V+A D GNPP+
Sbjct: 1062 LSQDNGRTYHLEVLAQDKGNPPK 1084



 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 46/143 (32%), Positives = 67/143 (46%), Gaps = 15/143 (10%)

Query: 95  GDISLMQCLDYETEDSYRFTVYATDTL-----MTTSATVNISVVNVNDWDPRFRYPQYEL 149
           G ++L + LD E    Y   + A+D       +    T  I V++ ND DP F  P+   
Sbjct: 648 GALTLAKQLDREERTEYVLILKASDRASPGEQLAAMVTARIIVLDQNDNDPVFIAPE--- 704

Query: 150 FLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSL---RGPYEKMFSIN-DSGHISIVDLS 205
           F      ++L PG+ + +V A D D GD   +S     G  E  F++  DSG   IV L+
Sbjct: 705 FTKLNVTSNLPPGASLVRVVAVDKDSGDNGRISYVITSGNEESRFTVGYDSG---IVSLA 761

Query: 206 ALNTSTIQLVVVATDTGNPPRQA 228
              T    L + A D G+PPR+A
Sbjct: 762 KPITKPANLEITANDHGSPPRKA 784



 Score = 43.1 bits (100), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 51/219 (23%), Positives = 103/219 (47%), Gaps = 23/219 (10%)

Query: 27  ALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKP---RDLRVKYWLSN 83
           A AT++V     +  + +F K+ Y+   LENLP   ++  V+   P   ++  ++Y +  
Sbjct: 256 ASATVLVMVLDDNDNDPRFEKDFYAFELLENLPSGTLVGRVSAIDPDIGKNSLLRYAVVQ 315

Query: 84  DYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDTLMTTSAT---VNISVVNVNDWDP 140
                      G I+  + LD E +  +   + A D  + + A    + ++V++VND  P
Sbjct: 316 TNSSFAVDPDTGKITTREPLDREAKGVHELVLEARDQGIPSRAARVPLKVTVLDVNDNSP 375

Query: 141 RFRYPQYELFLPHIPLADLTP-GSVIGKVEAADGDKGDRVTLSLRGPYEK------MFSI 193
               PQ ++    + + +  P G+ + +V A D D G+  +++     ++      +F+I
Sbjct: 376 EIVDPQRDV----VSVREEQPTGTEVARVRALDTDLGENASVTYSISKDRDSDGYNVFTI 431

Query: 194 ND-SGHI---SIVDLSALNTSTIQLVVVATDTGNPPRQA 228
           +  +G I   +++D    N    ++ V ATD G+PPR +
Sbjct: 432 DPITGMIRTKAVLDHEERNV--YRVSVRATDAGHPPRHS 468


>gi|242001600|ref|XP_002435443.1| protocadherin-21, putative [Ixodes scapularis]
 gi|215498779|gb|EEC08273.1| protocadherin-21, putative [Ixodes scapularis]
          Length = 695

 Score = 72.8 bits (177), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 64/199 (32%), Positives = 95/199 (47%), Gaps = 19/199 (9%)

Query: 49  EYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGERFSISR-QGDISLMQCLDYET 107
           E S+S +E  P+  V+ +     P D  +  +        FSI +  G +++   +DYE 
Sbjct: 26  ELSISVMEEQPIGSVVASFVATDP-DSNIASYSIEPENRYFSIDKLSGVVTIKDRVDYEQ 84

Query: 108 EDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTP-GS 163
               RF V   DT    ++ +A V  +VVN+ND DP F    Y     H  + +  P G+
Sbjct: 85  VQELRFAVVVRDTGIPQLSAAALVTANVVNINDNDPIFSQRAY-----HASVQENAPQGT 139

Query: 164 VIGKVEAADGDKGD--RVTLSLRGPYEKMFSINDSGHISIVDLSALN---TSTIQLVVVA 218
            + KVEA D D G+   V  SL G     F+IND G I +  ++ L+   T+ I L VVA
Sbjct: 140 FVTKVEANDIDAGEFGFVFYSLIGEKNTDFNINDKGEIRVAGMANLDREVTTAITLQVVA 199

Query: 219 TDTGNPP---RQASVPAIM 234
           +D G+     R  SVP  +
Sbjct: 200 SDMGHDKSTRRSVSVPVYL 218


>gi|297295315|ref|XP_001088343.2| PREDICTED: protein dachsous-like [Macaca mulatta]
          Length = 1635

 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 65/205 (31%), Positives = 93/205 (45%), Gaps = 17/205 (8%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWLSND---YGERFSI-SRQGDI 97
           F+ +EYSVS  EN+PV   LLT+T   P +    ++ Y   N+     E F + S  G+I
Sbjct: 242 FAPSEYSVSVPENIPVGTRLLTLTATDPDEGMNGKLTYSFRNEEDKISETFHLDSNLGEI 301

Query: 98  SLMQCLDYETEDSYRFTVYATD-TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
           S +Q LDYE    Y   V A D   +  SA V ++V +VND  P          L     
Sbjct: 302 STLQPLDYEESRFYLMEVVAQDGGALLASAKVVVTVQDVNDNAPEVILTSLTSSLSE--- 358

Query: 157 ADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDS--GHISIVDLSALNTSTI-- 212
            D  PG+VI      DGD G+   ++   P    F +  S   +  ++   AL+   I  
Sbjct: 359 -DCLPGTVIALFSVHDGDSGENGEIACSIPRNLPFKLEKSVDNYYHLLTDGALDREQIPE 417

Query: 213 -QLVVVATDTGNPPRQASVPAIMHF 236
             + + ATD GNPP  +S    +H 
Sbjct: 418 YNVTITATDKGNPPLSSSKTITLHI 442



 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 74/285 (25%), Positives = 127/285 (44%), Gaps = 48/285 (16%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKP---RDLRVKYWLSNDYGERFSISR-------Q 94
            F  + YSV  LEN P    + +V    P   ++ RV Y L+ D  +   +S         
Sbjct: 1228 FPHSSYSVYVLENNPRGASIFSVNALDPDMDQNARVSYSLAEDTLQGAPLSSYVSINSDT 1287

Query: 95   GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFL 151
            G +  ++  DYE     +  V A+D+    ++++ ++++ V++ ND  P   YP     +
Sbjct: 1288 GILYTLRSFDYEQLRDLQLWVTASDSGDPPLSSNVSLSLFVLDQNDNAPEILYPA----I 1343

Query: 152  P-----HIPLADLT--PGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-DSGHI- 199
            P      + LA  +  PG ++ KV A D D G    LS   L+     +F++   +G + 
Sbjct: 1344 PTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKASEPGLFAVGLHTGEVR 1403

Query: 200  ---SIVDLSALNTSTIQLVVVATDTGNPPRQASVPAIM----HFPEAIVQQASSKLNSGT 252
               +++D  AL  S   LVV   D G PP  A+V   +      PE +    S + + G+
Sbjct: 1404 TARALLDRDALKQS---LVVAVQDHGQPPLSATVTLTVAVADSIPEILADLGSLEPSDGS 1460

Query: 253  SSTVLII------LGVVLIVLGFVIILLILYI---HKNKHTKNNG 288
             ++ L +        V  + L FVI+LL L +   HK++  +  G
Sbjct: 1461 HNSDLTLYLVVAVAVVSCVFLAFVIVLLALRLRRWHKSRRLQALG 1505



 Score = 45.4 bits (106), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 58/218 (26%), Positives = 93/218 (42%), Gaps = 23/218 (10%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKP----RDLRVKYWLSNDYGER-----FSISRQG 95
           F +  Y+V   EN P    +  V+ + P      L   Y +++D   R      S+S Q 
Sbjct: 452 FHQASYTVHVAENNPPGASIAHVSASDPDLGPNGLVYYYIVASDLEPRELSSYVSVSAQS 511

Query: 96  DISLMQ-CLDYETEDSYRFTVYATDT-LMTTSATVNISVV--NVNDWDPRFRYPQY---- 147
            +   Q   D+E   ++  T+ A D  L   SA V++ V+  + ND  PR  YP      
Sbjct: 512 GVVFAQRAFDHEQLRAFELTLQARDQGLPALSANVSLRVLVGDRNDNAPRVLYPALGPDG 571

Query: 148 ELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS--LRGPYEK-MFSIN-DSGHISIVD 203
                 +P A   PG ++ KV A D D G    LS  ++ P E  + S+   +G +    
Sbjct: 572 SALFDMVPRA-AEPGYLVTKVVAVDADSGPNAWLSYHIQQPSEPGLLSLGLRTGEVRTAR 630

Query: 204 -LSALNTSTIQLVVVATDTGNPPRQASVPAIMHFPEAI 240
            L     +  +L+V   D G PP  A+V   + F +++
Sbjct: 631 TLGDREAARQRLLVTVCDGGQPPLSATVTLHLIFADSL 668



 Score = 44.3 bits (103), Expect = 0.096,   Method: Compositional matrix adjust.
 Identities = 60/226 (26%), Positives = 98/226 (43%), Gaps = 17/226 (7%)

Query: 13   LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTV-TTNK 71
            LV+ A+   +  R ++A ++V+    +     F++  Y VS  ENLPV   +L V  T++
Sbjct: 986  LVLTALDGGDPVRSSVARILVTVVDVNDNAPVFTQPVYRVSVPENLPVGTPVLAVNATDQ 1045

Query: 72   PRDL--RVKYW---LSNDYGERFSIS-RQGDISLMQCLDYETEDSYRFTVYATDTL-MTT 124
               +   V Y+   ++    + F ++   G+IS    LDYE    Y   V A D   +  
Sbjct: 1046 DEGVHGEVTYYFVKITEKISQIFCLNVLTGEISTSANLDYEESRFYELGVEARDQPGLRD 1105

Query: 125  SATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR 184
             A V I++++VND  P          +         PG+VI   +  D D G    ++  
Sbjct: 1106 RAKVLITILDVNDNVPEVVVTSGSRTIAE----SAPPGTVIALFQVFDRDSGLNGLVTCS 1161

Query: 185  GPYEKMFSIND--SGHISIVDLSALNTSTIQL---VVVATDTGNPP 225
             P    F +    S +  +V  +AL+   + L    V ATD G PP
Sbjct: 1162 IPRSLPFELEKSVSNYYRLVTNAALDREEVSLYNITVTATDKGTPP 1207



 Score = 41.2 bits (95), Expect = 0.94,   Method: Compositional matrix adjust.
 Identities = 42/142 (29%), Positives = 67/142 (47%), Gaps = 17/142 (11%)

Query: 102  CLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLAD 158
             LD E    Y  TV ATD     ++T   ++++V + ND  P F +  Y +++    L +
Sbjct: 1185 ALDREEVSLYNITVTATDKGTPPLSTETIISLNVADTNDNPPTFPHSSYSVYV----LEN 1240

Query: 159  LTPGSVIGKVEA--ADGDKGDRVTLSLR------GPYEKMFSIN-DSGHI-SIVDLSALN 208
               G+ I  V A   D D+  RV+ SL        P     SIN D+G + ++       
Sbjct: 1241 NPRGASIFSVNALDPDMDQNARVSYSLAEDTLQGAPLSSYVSINSDTGILYTLRSFDYEQ 1300

Query: 209  TSTIQLVVVATDTGNPPRQASV 230
               +QL V A+D+G+PP  ++V
Sbjct: 1301 LRDLQLWVTASDSGDPPLSSNV 1322


>gi|332244501|ref|XP_003271412.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 4-like [Nomascus
            leucogenys]
          Length = 4981

 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 79/270 (29%), Positives = 121/270 (44%), Gaps = 44/270 (16%)

Query: 2    INEDD-----FLQPITLV---VRAIQYDNQDRYALATLIVSKAGTSLRELQ--------- 44
            +NEDD     FL PIT V    R + Y+ Q  Y L T+     G     ++         
Sbjct: 1880 VNEDDEDGIFFLNPITGVFNLTRLLDYEVQQYYIL-TVRAEDGGGQFTTIRVYFNILDVN 1938

Query: 45   -----FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWL-SNDYGERFSISRQG 95
                 FS N YS S +ENLPV   +L        D    ++ Y + S D   +F++ + G
Sbjct: 1939 DNPPIFSLNSYSTSLMENLPVGSTVLVFNVTDADDGVNSQLTYSIASGDSLGQFTVDKNG 1998

Query: 96   DISLMQCLDYETEDSYRFTVYATD------TLMTTSATVNISVVNVNDWDPRFRYPQYEL 149
             + +++ LD E++  Y   V   D      +  T++A V+I +++VND  P F  P+   
Sbjct: 1999 ILKVLKALDRESQSFYNLVVQVHDLPQIPASRFTSTAQVSIILLDVNDNPPTFLSPK--- 2055

Query: 150  FLPHIPLADLTP-GSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIND-SGHISIV-DL 204
             L +IP  + TP  +V+ K +A D D G    +  +L  P    FSI    G + +  +L
Sbjct: 2056 -LTYIP--ENTPIDTVVFKAQATDPDSGPNSYIEYTLLNPLGNKFSIGTIDGEVRLTGEL 2112

Query: 205  SALNTSTIQLVVVATDTGNPPRQASVPAIM 234
                 S   L VVATD G P   +S   ++
Sbjct: 2113 DREEVSNYTLTVVATDKGQPSLSSSTEVVV 2142



 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 57/183 (31%), Positives = 89/183 (48%), Gaps = 16/183 (8%)

Query: 56   ENLPVNYVLLTVTTNKPR---DLRVKYWLSNDYGERFSISR-QGDISLMQCLDYETEDSY 111
            EN P++ V+       P    +  ++Y L N  G +FSI    G++ L   LD E   +Y
Sbjct: 2061 ENTPIDTVVFKAQATDPDSGPNSYIEYTLLNPLGNKFSIGTIDGEVRLTGELDREEVSNY 2120

Query: 112  RFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKV 168
              TV ATD     +++S  V + V+++ND +P F    Y++ +    L     G+ I +V
Sbjct: 2121 TLTVVATDKGQPSLSSSTEVVVMVLDINDNNPIFAQALYKVEINENTLT----GTDIIQV 2176

Query: 169  EAADGDKGDRVTLS---LRGPYEKMFSIND-SGHISIVD-LSALNTSTIQLVVVATDTGN 223
             AADGD+G    +    + G   + F I+  +G I++   L    T T  L V ATD G+
Sbjct: 2177 FAADGDEGTNGQVRYGIVNGNTNQEFRIDSVTGAITVAKPLDREKTPTYHLTVQATDRGS 2236

Query: 224  PPR 226
             PR
Sbjct: 2237 TPR 2239



 Score = 58.2 bits (139), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 61/192 (31%), Positives = 92/192 (47%), Gaps = 24/192 (12%)

Query: 50   YSVSALENLPVNYVLLTVTTNKPRDLRV----KYWLSNDYGERFSIS-RQGDISLMQCLD 104
            +S    EN P+ Y +  VTT+   D+ +    +Y +  D    F+I+   GDI + + L+
Sbjct: 2777 FSAHVPENSPLGYTVTRVTTSD-EDIGINAISRYSIM-DTSLPFTINPSTGDIVISRPLN 2834

Query: 105  YETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSV 164
             E  D YR  V A D+  T S  V I V +VND  PRF  P Y L  P   L ++  GS 
Sbjct: 2835 REDTDRYRIRVSAHDSGWTVSTDVTIFVTDVNDNAPRFSRPSYYLDCPE--LTEI--GSK 2890

Query: 165  IGKVEAADGDKGD--RVTLSLRGPYEKMFSIN-DSGHI---------SIVDLSALNTSTI 212
            + +V AAD D+G   +V   ++   E  F IN  +G I         ++   S +N +  
Sbjct: 2891 VTQVFAADPDEGSNGQVFYFIKSQSE-YFRINATTGEIFNKQILKYQNVTGFSNVNINRH 2949

Query: 213  QLVVVATDTGNP 224
              +V ++D G P
Sbjct: 2950 SFIVTSSDRGKP 2961



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 47/158 (29%), Positives = 81/158 (51%), Gaps = 13/158 (8%)

Query: 87   ERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDTL---MTTSATVNISVVNVNDWDPRF 142
             +F+I S  G ++L   LDYE   +Y   + A D+    + ++ T+NI +++ ND  P F
Sbjct: 1256 RQFAIDSTSGQVALTGKLDYEATPAYSLVIQAVDSGTIPLNSTCTLNIDILDENDNTPSF 1315

Query: 143  RYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTL--SLRGPY-EKMFSIN-DSGH 198
              P+  LF+    L ++  G ++  V A D D GD   L  S+ G      FSI+ ++G 
Sbjct: 1316 --PKSTLFVD--VLENMRIGELVSSVTATDSDSGDNADLYYSITGTNNHGTFSISPNTGS 1371

Query: 199  ISIVDLSALNTSTI-QLVVVATDTGNPPRQASVPAIMH 235
            I +       T ++ +L + A D G PPR +++  ++H
Sbjct: 1372 IFLAKKLDFETQSLYKLNITAKDQGRPPRSSTMSVVIH 1409



 Score = 54.7 bits (130), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 58/198 (29%), Positives = 88/198 (44%), Gaps = 24/198 (12%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLS-NDYGERFSISRQGDISLM 100
            F +  Y V+  E+ PVN     V     +   +  + Y ++  + G+ F I   G + + 
Sbjct: 996  FDQLSYEVTLSESEPVNSRFFKVQASDKDSGANGEIAYTIAEGNTGDAFGIFPDGQLYIK 1055

Query: 101  QCLDYETEDSYRFTVYATDTLMTT-SATVNISVV--NVNDWDPRFRYPQYELFLPHIPLA 157
              LD E +D Y   V A+D  +   SATVN++V+  +VND  P F    Y  +      A
Sbjct: 1056 SELDRELQDRYVLMVVASDRAVEPLSATVNVTVILEDVNDNRPLFNSTNYTFYFEEEQRA 1115

Query: 158  DLTPGSVIGKVEAADGDKGD----RVTLSLRGPYEKMFSINDSGHIS---IVDLSAL--- 207
                GS +GKV A D D G     R +  +  P  ++ +I  SG I+     D  +L   
Sbjct: 1116 ----GSFVGKVSAVDKDFGPNGEVRYSFEMVQPDFELHAI--SGEITNTHQFDRESLMRR 1169

Query: 208  -NTSTIQLVVVATDTGNP 224
              T+     V+ATD G P
Sbjct: 1170 RGTAVFSFTVIATDQGLP 1187



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 56/190 (29%), Positives = 95/190 (50%), Gaps = 15/190 (7%)

Query: 56   ENLPVNYVLLTVTTNKPRDLRVKYWL-SNDYGERFSISR-QGDISLMQCLDYETEDSYRF 113
            EN PV+ ++ T+T +  R   + Y++ S + G  F I +  G +S+ Q LD+E    Y  
Sbjct: 2578 ENQPVSSLVTTITGSSLRGEPMSYYIASGNLGNTFQIDQLTGQVSISQPLDFEKIQKYVV 2637

Query: 114  TVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEA 170
             + A D      ++   ++I+V++VND  P F+    + F+  I L +L+P  ++  V A
Sbjct: 2638 WIEARDGGFPPFSSYEKLDITVLDVNDNAPIFK---EDPFISEI-LENLSPRKIL-TVSA 2692

Query: 171  ADGDKGDRVTLS---LRGPYEKMFSINDS-GHI-SIVDLSALNTSTIQLVVVATDTGNPP 225
             D D G    L    + G  E  FSIN + G I S+  L     S   L + ++D G+P 
Sbjct: 2693 MDKDSGPNGQLDYEIVNGNMENSFSINHATGEIRSVRPLDREKVSHYVLTIKSSDKGSPS 2752

Query: 226  RQASVPAIMH 235
            +  SV  +++
Sbjct: 2753 QSTSVKVMIN 2762



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/101 (32%), Positives = 48/101 (47%), Gaps = 5/101 (4%)

Query: 77   VKYWLSNDYGERFSIS-RQGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNV 135
            V Y + +   + F I    GD+   + LD E    Y   V A D L ++   +NI+V +V
Sbjct: 1775 VTYTIISGADDSFRIDPESGDLIATRRLDRERRSKYSLLVRADDGLQSSDMRINITVSDV 1834

Query: 136  NDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG 176
            ND  P+F  P Y   +P     D  PGS++  + A D D G
Sbjct: 1835 NDHTPKFSRPVYSFDIPE----DTIPGSLVAAILATDDDSG 1871



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 50/176 (28%), Positives = 78/176 (44%), Gaps = 34/176 (19%)

Query: 89   FSISRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYP 145
            F++S  G++ + Q LD ET++ +   + ATD+    +T + T+N+ V +VND  P F   
Sbjct: 2308 FTLSASGELGVTQSLDRETKEHFVLMITATDSGSPALTGTGTINVIVDDVNDNVPTFASK 2367

Query: 146  QYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDS-GHI---SI 201
             Y   +P     D   G+ +  V A+D D      + + G     F+IN S G I   ++
Sbjct: 2368 AYFTTIPE----DAPTGTDVLLVNASDADASTNAVIRIIGG-NSQFTINPSTGQIITSAL 2422

Query: 202  VDLSALNTSTIQLVVVATDTG--------------------NPPRQASVPAIMHFP 237
            +D    +  T  LVVV +D G                    NPPR    P + H P
Sbjct: 2423 LDRETKDNYT--LVVVCSDAGSPEPLSSSTSVLVTVTDVNDNPPRFQHHPYVTHIP 2476



 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 51/193 (26%), Positives = 97/193 (50%), Gaps = 12/193 (6%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRDLR--VKYWLS-NDYGERFSISR-QGDISLM 100
           FS+  YS    EN+ + Y + +V+ +   DL   + Y ++  D    F+I++  G ++  
Sbjct: 793 FSQVAYSFVVFENVALGYHVGSVSAST-MDLNSNISYLITTGDQKGMFAINQVTGQLTTA 851

Query: 101 QCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLT 160
             +D E +  Y+  V A+   +T    VNI+V ++ND  P F      + +    + +  
Sbjct: 852 NVIDREEQSFYQLKVVASGGTVTGDTMVNITVKDLNDNSPHFLQAIESVNV----VENWQ 907

Query: 161 PGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIND-SGHISIVDLSALNTSTIQLVVV 217
            G  I + +A D D+G    V  SL+   + +F+IN+ +G IS++    ++  + Q+ ++
Sbjct: 908 AGHSIFQAKAVDPDEGVNGMVLYSLKQNPKNLFAINEKNGTISLLGPLDVHAGSYQIEIL 967

Query: 218 ATDTGNPPRQASV 230
           A+D G P   +SV
Sbjct: 968 ASDMGVPQLSSSV 980



 Score = 51.6 bits (122), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 73/237 (30%), Positives = 104/237 (43%), Gaps = 22/237 (9%)

Query: 11  ITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNE-YSVSALENLPVNYVLLTVTT 69
           I L + A       + + A L+V+    +  +  FS+ E Y VS +EN P    LL +  
Sbjct: 548 IVLNISARDQGVHPKVSYARLVVTLLDVNDEKPLFSQPEGYDVSVVENAPTGTELLMLRA 607

Query: 70  NKPRDL----RVKYWLSNDYGERFSISR---QGDISLMQCLDYETEDSYRFTVYATD--- 119
               DL     V++ L     +R S       G +S +  LD E +  Y   V ATD   
Sbjct: 608 TD-GDLGDNGTVRFSLQEAETDRRSFRLDPVSGRLSTISSLDREEQAFYSLLVLATDLGS 666

Query: 120 TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRV 179
              ++ A +N+S++++ND  P F   QY     HI   +   GS I  V A D D G   
Sbjct: 667 PPQSSMARINVSLLDINDNSPVFYPVQY---FAHIK-ENEPGGSYITTVSATDPDLGTNG 722

Query: 180 TL--SLRGPYEKMFSIN-DSGHISI-VDLSALNTSTIQLVVVATDTGN--PPRQASV 230
           T+  S+       F +N  SG IS  + L     +  QL +VATD GN   P QA V
Sbjct: 723 TVKYSISAGDRSRFQVNAQSGVISTRMALDREEKTAYQLQIVATDGGNLQSPNQAIV 779



 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 48/149 (32%), Positives = 69/149 (46%), Gaps = 12/149 (8%)

Query: 95   GDISLMQCLDYETEDSYRFTVYATDTL----MTTSATVNISVVNVNDWDPRFRYPQYELF 150
            G I     LD ET+D+Y   V  +D      +++S +V ++V +VND  PRF   Q+  +
Sbjct: 2415 GQIITSALLDRETKDNYTLVVVCSDAGSPEPLSSSTSVLVTVTDVNDNPPRF---QHHPY 2471

Query: 151  LPHIPLADLTPGSVIGKVEAADGDKGDRVTL--SLRGPYEKMFSINDSGHISIVDLSALN 208
            + HIP   L PGS +  V   D D G    L  SL G   + F I D    +I+    LN
Sbjct: 2472 VTHIPSPTL-PGSFVFAVTVTDADIGPNSELHYSLSGRNSEKFHI-DPLRGAIMAAGPLN 2529

Query: 209  -TSTIQLVVVATDTGNPPRQASVPAIMHF 236
              S +   V   D G+ P+  S    + F
Sbjct: 2530 GASEVTFSVHVKDGGSFPKTDSTTVTVRF 2558



 Score = 45.1 bits (105), Expect = 0.062,   Method: Compositional matrix adjust.
 Identities = 45/169 (26%), Positives = 79/169 (46%), Gaps = 17/169 (10%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGERFSIS-RQGDISLM 100
            F  ++Y  + LEN P    ++ +     +   +  + Y + +   + F I    G I+  
Sbjct: 3194 FLSDDYFPTVLENAPSGTTVIHLNATDADSGTNAVIAYTVQSSDSDLFVIDPNTGVITTQ 3253

Query: 101  QCLDYETEDSYRFTVYA---TDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLA 157
              LD+ET+ SY  TV A    D    + ATVN+ +   N++ PRF    Y     +  ++
Sbjct: 3254 GFLDFETKQSYHLTVKAFNVPDEERCSFATVNVQLKGTNEYVPRFVSKLY-----YFEIS 3308

Query: 158  DLTP-GSVIGKVEAAD---GDKGDRVTLSLRGPYEKMFSIND-SGHISI 201
            +  P G+++G+V A+D   G  G+   L      +K F IN+ +G I +
Sbjct: 3309 EAAPKGTIVGEVFASDRDLGTDGEVHYLIFGNSRKKGFQINEKTGQIYV 3357



 Score = 40.8 bits (94), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 55/108 (50%), Gaps = 7/108 (6%)

Query: 89   FSISRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYP 145
            FS+S  G +S  + +D E    +  +V   D+    M+++ TV+I+V++ ND   + R  
Sbjct: 3558 FSLSTAGVLSTTREIDREQIADFYLSVVTKDSGVPQMSSTGTVHITVIDQNDNPSQSR-- 3615

Query: 146  QYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSI 193
              E+F+ +    +L PG ++G V+  D D  D    SL      +FSI
Sbjct: 3616 TVEIFVNY--YGNLFPGGILGSVKPQDPDVLDSFHCSLTSGVTSLFSI 3661


>gi|38195903|gb|AAR13653.1| fat-like cadherin FATJ protein [Homo sapiens]
          Length = 3222

 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 79/270 (29%), Positives = 121/270 (44%), Gaps = 44/270 (16%)

Query: 2   INEDD-----FLQPITLV---VRAIQYDNQDRYALATLIVSKAGTSLRELQ--------- 44
           +NEDD     FL PIT V    R + Y+ Q  Y L T+     G     ++         
Sbjct: 178 VNEDDEDGIFFLNPITGVFNLTRLLDYEVQQYYIL-TVRAEDGGGQFTTIRVYFNILDVN 236

Query: 45  -----FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWL-SNDYGERFSISRQG 95
                FS N YS S +ENLPV   +L        D    ++ Y + S D   +F++ + G
Sbjct: 237 DNPPIFSLNSYSTSLMENLPVGSTVLVFNVTDADDGINSQLTYSIASGDSLGQFTVDKNG 296

Query: 96  DISLMQCLDYETEDSYRFTVYATD------TLMTTSATVNISVVNVNDWDPRFRYPQYEL 149
            + +++ LD E++  Y   V   D      +  T++A V+I +++VND  P F  P+   
Sbjct: 297 VLKVLKALDRESQSFYNLVVQVHDLPQIPASRFTSTAQVSIILLDVNDNPPTFLSPK--- 353

Query: 150 FLPHIPLADLTP-GSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIND-SGHISIV-DL 204
            L +IP  + TP  +V+ K +A D D G    +  +L  P    FSI    G + +  +L
Sbjct: 354 -LTYIP--ENTPIDTVVFKAQATDPDSGPNSYIEYTLLNPLGNKFSIGTIDGEVRLTGEL 410

Query: 205 SALNTSTIQLVVVATDTGNPPRQASVPAIM 234
                S   L VVATD G P   +S   ++
Sbjct: 411 DREEVSNYTLTVVATDKGQPSLSSSTEVVV 440



 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 57/183 (31%), Positives = 89/183 (48%), Gaps = 16/183 (8%)

Query: 56  ENLPVNYVLLTVTTNKPR---DLRVKYWLSNDYGERFSISR-QGDISLMQCLDYETEDSY 111
           EN P++ V+       P    +  ++Y L N  G +FSI    G++ L   LD E   +Y
Sbjct: 359 ENTPIDTVVFKAQATDPDSGPNSYIEYTLLNPLGNKFSIGTIDGEVRLTGELDREEVSNY 418

Query: 112 RFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKV 168
             TV ATD     +++S  V + V+++ND +P F    Y++ +    L     G+ I +V
Sbjct: 419 TLTVVATDKGQPSLSSSTEVVVMVLDINDNNPIFAQALYKVEINENTLT----GTDIIQV 474

Query: 169 EAADGDKGDRVTLS---LRGPYEKMFSIND-SGHISIVD-LSALNTSTIQLVVVATDTGN 223
            AADGD+G    +    + G   + F I+  +G I++   L    T T  L V ATD G+
Sbjct: 475 FAADGDEGTNGQVRYGIVNGNTNQEFRIDSVTGAITVAKPLDREKTPTYHLTVQATDRGS 534

Query: 224 PPR 226
            PR
Sbjct: 535 TPR 537



 Score = 54.7 bits (130), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 62/225 (27%), Positives = 98/225 (43%), Gaps = 39/225 (17%)

Query: 45  FSKNEYSVSALENLPV--NYVLLTVTTNKPR--DLRVKYWL-SNDYGERFSISRQGDISL 99
           F  + YSV+  ENL      +L  V  +  R  + ++ Y L   +    F++S  G++ +
Sbjct: 557 FELSPYSVNVPENLGTLPRTILQVVARDDDRGSNSKLSYVLFGGNEDNAFTLSASGELGV 616

Query: 100 MQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
            Q LD ET++ +   + ATD+    +T + T+N+ V +VND  P F    Y   +P    
Sbjct: 617 TQSLDRETKERFVLMITATDSGSPALTGTGTINVIVDDVNDNVPTFASKAYFTTIPE--- 673

Query: 157 ADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDS-GHI---SIVDLSALNTSTI 212
            D   G+ +  V A+D D      + + G     F+IN S G I   +++D    +  T 
Sbjct: 674 -DAPTGTDVLLVNASDADASKNAVIRIIGG-NSQFTINPSTGQIITSALLDRETKDNYT- 730

Query: 213 QLVVVATDTG--------------------NPPRQASVPAIMHFP 237
            LVVV +D G                    NPPR    P + H P
Sbjct: 731 -LVVVCSDAGSPEPLSSSTSVLVTVTDVNDNPPRFQHHPYVTHIP 774



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 56/190 (29%), Positives = 95/190 (50%), Gaps = 15/190 (7%)

Query: 56   ENLPVNYVLLTVTTNKPRDLRVKYWL-SNDYGERFSISR-QGDISLMQCLDYETEDSYRF 113
            EN PV+ ++ T+T +  R   + Y++ S + G  F I +  G +S+ Q LD+E    Y  
Sbjct: 876  ENQPVSSLVTTITGSSLRGEPMSYYIASGNLGNTFQIDQLTGQVSISQPLDFEKIQKYVV 935

Query: 114  TVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEA 170
             + A D      ++   ++I+V++VND  P F+    + F+  I L +L+P  ++  V A
Sbjct: 936  WIEARDGGFPPFSSYEKLDITVLDVNDNAPIFK---EDPFISEI-LENLSPRKIL-TVSA 990

Query: 171  ADGDKGDRVTLS---LRGPYEKMFSINDS-GHI-SIVDLSALNTSTIQLVVVATDTGNPP 225
             D D G    L    + G  E  FSIN + G I S+  L     S   L + ++D G+P 
Sbjct: 991  MDKDSGPNGQLDYEIVNGNMENSFSINHATGEIRSVRPLDREKVSHYVLTIKSSDKGSPS 1050

Query: 226  RQASVPAIMH 235
            +  SV  +++
Sbjct: 1051 QSTSVKVMIN 1060



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/101 (32%), Positives = 48/101 (47%), Gaps = 5/101 (4%)

Query: 77  VKYWLSNDYGERFSIS-RQGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNV 135
           V Y + +   + F I    GD+   + LD E    Y   V A D L ++   +NI+V +V
Sbjct: 73  VTYTIISGADDSFRIDPESGDLIATRRLDRERRSKYSLLVRADDGLQSSDMRINITVSDV 132

Query: 136 NDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG 176
           ND  P+F  P Y   +P     D  PGS++  + A D D G
Sbjct: 133 NDHTPKFSRPVYSFDIPE----DTIPGSLVAAILATDDDSG 169



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 58/192 (30%), Positives = 90/192 (46%), Gaps = 24/192 (12%)

Query: 50   YSVSALENLPVNYVLLTVTTNKPRDLRV----KYWLSNDYGERFSIS-RQGDISLMQCLD 104
            +S    EN P+ Y +  VTT+   D+ +    +Y +  D    F+I+   GDI + + L+
Sbjct: 1075 FSAHVPENSPLGYTVTRVTTSD-EDIGINAISRYSIM-DASLPFTINPSTGDIVISRPLN 1132

Query: 105  YETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSV 164
             E  D YR  V A D+  T S  V I V ++ND  PRF    Y L  P   L ++  GS 
Sbjct: 1133 REDTDRYRIRVSAHDSGWTVSTDVTIFVTDINDNAPRFSRTSYYLDCPE--LTEI--GSK 1188

Query: 165  IGKVEAADGDKGD--RVTLSLRGPYEKMFSIN-DSGHI---------SIVDLSALNTSTI 212
            + +V A D D+G   +V   ++   E  F IN  +G I         ++   S +N +  
Sbjct: 1189 VTQVFATDPDEGSNGQVFYFIKSQSE-YFRINATTGEIFNKQILKYQNVTGFSNVNINRH 1247

Query: 213  QLVVVATDTGNP 224
              +V ++D G P
Sbjct: 1248 SFIVTSSDRGKP 1259



 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 48/149 (32%), Positives = 69/149 (46%), Gaps = 12/149 (8%)

Query: 95  GDISLMQCLDYETEDSYRFTVYATDT----LMTTSATVNISVVNVNDWDPRFRYPQYELF 150
           G I     LD ET+D+Y   V  +D      +++S +V ++V +VND  PRF   Q+  +
Sbjct: 713 GQIITSALLDRETKDNYTLVVVCSDAGSPEPLSSSTSVLVTVTDVNDNPPRF---QHHPY 769

Query: 151 LPHIPLADLTPGSVIGKVEAADGDKGDRVTL--SLRGPYEKMFSINDSGHISIVDLSALN 208
           + HIP   L PGS +  V   D D G    L  SL G   + F I D    +I+    LN
Sbjct: 770 VTHIPSPTL-PGSFVFAVTVTDADIGPNSELHYSLSGRNSEKFHI-DPLRGAIMAAGPLN 827

Query: 209 -TSTIQLVVVATDTGNPPRQASVPAIMHF 236
             S +   V   D G+ P+  S    + F
Sbjct: 828 GASEVTFSVHVKDGGSFPKTDSTTVTVRF 856



 Score = 44.7 bits (104), Expect = 0.070,   Method: Compositional matrix adjust.
 Identities = 44/161 (27%), Positives = 74/161 (45%), Gaps = 16/161 (9%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGERFSIS-RQGDISLM 100
            F  ++Y  + LEN P    ++ +     +   +  + Y + +   + F I    G I+  
Sbjct: 1492 FLSDDYFPTVLENAPSGTTVIHLNATDADSGTNAVIAYTVQSSDSDLFVIDPNTGVITTQ 1551

Query: 101  QCLDYETEDSYRFTVYA---TDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLA 157
              LD+ET+ SY  TV A    D    + ATVNI +   N++ PRF    Y     +  ++
Sbjct: 1552 GFLDFETKQSYHLTVKAFNVPDEERCSFATVNIQLKGTNEYVPRFVSKLY-----YFEIS 1606

Query: 158  DLTP-GSVIGKVEAAD---GDKGDRVTLSLRGPYEKMFSIN 194
            +  P G+++G+V A+D   G  G+   L      +K F IN
Sbjct: 1607 EAAPKGTIVGEVFASDRDLGTDGEVHYLIFGNSRKKGFQIN 1647



 Score = 40.4 bits (93), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 55/108 (50%), Gaps = 7/108 (6%)

Query: 89   FSISRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYP 145
            FS+S  G +S  + +D E    +  +V   D+    M+++ TV+I+V++ ND   + R  
Sbjct: 1856 FSLSTAGVLSTTREIDREQIADFYLSVVTKDSGVPQMSSTGTVHITVIDQNDNPSQSR-- 1913

Query: 146  QYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSI 193
              E+F+ +    +L PG ++G V+  D D  D    SL      +FSI
Sbjct: 1914 TVEIFVNY--YGNLFPGGILGSVKPQDPDVLDSFHCSLTSGVTSLFSI 1959


>gi|123704351|ref|NP_001074046.1| cadherin EGF LAG seven-pass G-type receptor 2 precursor [Danio
           rerio]
 gi|117938962|dbj|BAF36659.1| cadherin EGF LAG seven-pass G-type receptor 2 [Danio rerio]
          Length = 2941

 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 72/227 (31%), Positives = 107/227 (47%), Gaps = 20/227 (8%)

Query: 15  VRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTT---NK 71
           V A+ +    R A+ATL V+ + T+  +  F + +Y  S  ENL + Y +LTV     + 
Sbjct: 321 VTAVDHGTPRRTAMATLTVTVSDTNDHDPAFEQQDYKESIRENLEIGYEVLTVRATDGDA 380

Query: 72  PRDLRVKYWLSNDYG--ERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDTL-----MT 123
           P +  + Y L N  G  + F I SR G I     +D ET DSY   V A D        +
Sbjct: 381 PINGNILYHLLNSNGTNDVFEIDSRSGVIRTRGLVDRETVDSYMLMVEANDQGRDPGPRS 440

Query: 124 TSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS- 182
            +ATV+I V + ND  P+F   +Y + +P     DLTP + I +V A D D+G+   +  
Sbjct: 441 ATATVHIVVEDDNDNAPQFSEKRYIVQVPE----DLTPNTEILQVTATDQDRGNNAVVHF 496

Query: 183 --LRGPYEKMFSIN-DSGHISIV-DLSALNTSTIQLVVVATDTGNPP 225
             + G     F I+  +G + +V  L         L + A D G PP
Sbjct: 497 SIMSGNTRGQFYIDAQTGKLDLVSQLDYEMNKEYTLRIRAQDGGRPP 543



 Score = 48.9 bits (115), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 60/243 (24%), Positives = 105/243 (43%), Gaps = 39/243 (16%)

Query: 11   ITLVVRAIQYDNQDRYALATLIVSKAGTSLR---ELQ------------FSKNEYSVSAL 55
            I   +R +  +N   Y L    V K   +L+   ++Q            F K+E+ +   
Sbjct: 932  IVRTLRRLDRENTAIYNLQAFAVDKGVPALKTAVDMQVTILDVNDNPPVFEKDEFDIFVE 991

Query: 56   ENLPVNYVLLTVTTNKP---RDLRVKYWL-SNDYGERFSIS-RQGDISLMQCLDYETEDS 110
            EN P+  V+  ++ + P    + ++ Y +   +  E F +    G+++ +  LDYET   
Sbjct: 992  ENSPIGLVVAHISASDPDEGSNAQIMYQIVEGNIPEVFQLDIFSGELTALTDLDYETRAE 1051

Query: 111  YRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLT---PGSVIGK 167
            Y   V AT   + + ATV+I +++ ND  P  +  Q  +F  ++   D T   P  VIG+
Sbjct: 1052 YVIVVQATSAPLVSRATVHIKLIDKNDNVPVLKNFQI-IFNNYV--TDKTNSFPSGVIGR 1108

Query: 168  VEAADGDKGDRVTLSLRGPYEKMFSINDSGHISIVDLSALNTSTIQLVVVATDTGNPPRQ 227
            + A D D  D++  S     E             + L  LN ST ++ +      N P +
Sbjct: 1109 IPAQDPDVSDQLHYSFEAGNE-------------LKLVILNQSTGEIRLSRALDNNRPLE 1155

Query: 228  ASV 230
            AS+
Sbjct: 1156 ASM 1158



 Score = 45.8 bits (107), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 44/142 (30%), Positives = 65/142 (45%), Gaps = 15/142 (10%)

Query: 44  QFSKNEYSVSALENLPVN---YVLLTVTTNKPRDLRVKYWLSNDYGER----FSIS-RQG 95
           QF    Y VS  EN P      VL  V  ++    R++Y L   +  R    F++    G
Sbjct: 242 QFHPPMYQVSVPENQPAGTFVVVLKAVDPDEGEAGRLEYVLEALFDSRSNNLFAVDPASG 301

Query: 96  DISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLP 152
            +S ++ LD ET+D++ F V A D      T  AT+ ++V + ND DP F    Y+  + 
Sbjct: 302 VVSTVEILDRETKDTHVFRVTAVDHGTPRRTAMATLTVTVSDTNDHDPAFEQQDYKESIR 361

Query: 153 HIPLADLTPGSVIGKVEAADGD 174
                +L  G  +  V A DGD
Sbjct: 362 E----NLEIGYEVLTVRATDGD 379



 Score = 44.3 bits (103), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 50/191 (26%), Positives = 90/191 (47%), Gaps = 12/191 (6%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTT-NKPRDLRVKYWLSN-DYGERFSISRQ---GDIS 98
           +F++  Y +   E+  V   ++TV+  ++  +  V Y +S+ +   RFSI+ Q   G I+
Sbjct: 669 EFTQKAYYMRLNEDAAVGTSVVTVSAVDQDINSVVTYQISSGNTRNRFSITSQSGGGLIT 728

Query: 99  LMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLAD 158
           L   LDY+ E  Y  TV A+D     +A V ++V + N   P F+   Y + +      D
Sbjct: 729 LALPLDYKLERQYVLTVTASDGTRFDTAKVYVNVTDANTHRPVFQSSHYTVNINE----D 784

Query: 159 LTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSINDSGHISI-VDLSALNTSTIQLV 215
              G+ +  + A D D G+  R+T  +     +     DSG ++  ++L   +  +  L 
Sbjct: 785 RPVGTTVVMISATDEDTGENARITYIMDDSIPQFNIDADSGAVTTQMELDYEDQVSYTLA 844

Query: 216 VVATDTGNPPR 226
           + A D G P +
Sbjct: 845 ITARDNGIPQK 855


>gi|45551880|ref|NP_731649.2| cadherin 87A [Drosophila melanogaster]
 gi|47117922|sp|Q9VGG5.4|CAD87_DROME RecName: Full=Cadherin-87A; Flags: Precursor
 gi|45446460|gb|AAF54717.4| cadherin 87A [Drosophila melanogaster]
          Length = 1975

 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 65/194 (33%), Positives = 99/194 (51%), Gaps = 20/194 (10%)

Query: 55   LENLPVNYVLLTVTTNKPRDLRVKYWLS-NDYGERFSISR-QGDISLMQCLDYETEDSYR 112
            +E  PV  VL T+  N       ++ +S NDY   F+I++  G I  +  LDYE     +
Sbjct: 1014 VEEQPVGTVLTTLQANDEDSSIGEFNISDNDY---FAINQTSGMIYTIARLDYEVVKEVK 1070

Query: 113  FTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTP-GSVIGKV 168
            F V  +DT    +T +A V + ++N+ND DP+F    Y     +  + + +P G+V GKV
Sbjct: 1071 FQVTVSDTGVPALTATADVVVDIINLNDNDPKFSQSDY-----YFNVTENSPRGTVAGKV 1125

Query: 169  EAADGDKG--DRVTLSLRGPYEKMFSIND-SGHISIVDLSALNTSTIQ---LVVVATDTG 222
            EA DGD G    +T +L G   K FSI+  +G++ + + S L+   I+   L VVA D  
Sbjct: 1126 EAHDGDVGVFGEITYTLIGENNKYFSIDAYTGNVMVANSSILDREQIKELTLSVVAQDKA 1185

Query: 223  NPPRQASVPAIMHF 236
                Q S  A +H 
Sbjct: 1186 PAAVQKSATATIHI 1199



 Score = 47.8 bits (112), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 43/134 (32%), Positives = 64/134 (47%), Gaps = 23/134 (17%)

Query: 102 CLDYETEDSYRFTVYATDTLMTTSATV---NISVVNVNDWDPRFRYPQYELFLPHIPLAD 158
           CLDYE+E +Y  +  ATD     SA+V    ISV + ND  P    P Y         A 
Sbjct: 626 CLDYESETTYFLSYKATDDNGRGSASVVSLRISVTDANDSPPVCESPLYR--------AS 677

Query: 159 LTPGSVIGK----VEAADGDKGDRVTLSLRGP--YEKMFSIN-DSGHISI-----VDLSA 206
           +  G+V+      V+A D D   R++  +RG    E +F I+ ++G I I     +D++ 
Sbjct: 678 VDEGAVVFDSPLIVKARDADTMSRISYRIRGSEQVESIFDIDRETGQIIIRPNATLDVTN 737

Query: 207 LNTSTIQLVVVATD 220
           LN+  +   V A D
Sbjct: 738 LNSDQLIFAVEAND 751



 Score = 47.4 bits (111), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 66/227 (29%), Positives = 106/227 (46%), Gaps = 42/227 (18%)

Query: 11  ITLVVRAIQYDN----QDRYALATLIVSKAGTSLRELQ-----FSKNEYSVSALEN-LPV 60
           I+LV+RA +  N     D    AT   +KA  ++R++      F+  EYSVS LEN LP 
Sbjct: 318 ISLVIRARELVNGVPSDDPLTSAT---AKATVTIRDVNDSPPVFNHKEYSVSLLENTLPG 374

Query: 61  NYVLLTVT-TNKPRDLRVKYWLS-NDYGERFSIS-------RQGDISLMQ-CLDYETEDS 110
             + L ++ ++    +  K+ L  +D    F +         Q +I +    LDYE  + 
Sbjct: 375 TPLALDMSVSDADVGINSKFALRLDDVSGVFDVEPKLVTGYSQVNIRVANGTLDYENPNQ 434

Query: 111 YRFTVYA----TDT--LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSV 164
            +F V      TDT   ++++AT+ +SV++ ND  P F    Y   +    L    PG  
Sbjct: 435 RKFIVLVVAEETDTNPRLSSTATITVSVLDANDNKPVFEQESYSASVSEAAL----PGQY 490

Query: 165 IGKVEAAD------GDKGDRVTLSLRGPYEKMFSIND-SGHISIVDL 204
           I  + A D      GD G R +LS  G   ++F +N+ +G IS+ + 
Sbjct: 491 IATITARDVDSGSYGDSGIRYSLSGTGA--ELFHVNEQTGVISLANC 535



 Score = 41.6 bits (96), Expect = 0.57,   Method: Compositional matrix adjust.
 Identities = 35/122 (28%), Positives = 52/122 (42%), Gaps = 12/122 (9%)

Query: 109 DSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKV 168
           D   F V A D L T    VNI+V +VN+  P F    Y   +      +   G+ + +V
Sbjct: 741 DQLIFAVEANDGLFTAHCGVNITVRDVNNHVPNFEQQSYSAVVEE----NSEIGTSVERV 796

Query: 169 EAADGDKGDRVTLSLR---GPYEKMFSINDSGHISI---VDLSALNTSTIQLVVVATDTG 222
            A D D G    L  R   G ++    +  +G + +   +D    N  T QL + A+D G
Sbjct: 797 HATDLDTGKNAELRYRIQQGSFDDFGIVETTGEVFVSRKLDFDRRN--TYQLQIQASDQG 854

Query: 223 NP 224
            P
Sbjct: 855 TP 856



 Score = 38.9 bits (89), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 37/149 (24%), Positives = 68/149 (45%), Gaps = 13/149 (8%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGERFSI-SRQGDISLM 100
           F +  YS    EN  +   +  V     +  ++  ++Y +     + F I    G++ + 
Sbjct: 774 FEQQSYSAVVEENSEIGTSVERVHATDLDTGKNAELRYRIQQGSFDDFGIVETTGEVFVS 833

Query: 101 QCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL- 156
           + LD++  ++Y+  + A+D     +T +AT+ I+V N ND DP F  P  +    H  + 
Sbjct: 834 RKLDFDRRNTYQLQIQASDQGTPSLTGTATLTINVQNSNDKDPYF-VPATQ----HAEVR 888

Query: 157 ADLTPGSVIGKVEAADGDKGDRVTLSLRG 185
           AD  PG ++  + A D D  +   L   G
Sbjct: 889 ADAPPGQLVYTLIALDPDVANHNALEFAG 917



 Score = 38.1 bits (87), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 58/242 (23%), Positives = 89/242 (36%), Gaps = 44/242 (18%)

Query: 28   LATLIVSKAGTSLRELQFSKNEYSVSALEN----LPVNYVLLTVTTNKPRDLRVKYWLSN 83
            L ++ +  A  +  E   + N Y VS  EN    + + ++     +   RD+     L N
Sbjct: 1416 LLSVSIVDANENRPEFPDASNPYKVSINENSGRDVKIGHIQAASRSKHNRDIFYYMLLGN 1475

Query: 84   DYGERFSISRQGDISLMQCLDYETEDSYRFTVYAT-----------------DTLM--TT 124
            + G  +     GDI   + LD E  D Y   + A+                  TL    T
Sbjct: 1476 EDGAFYVDKLTGDIYTNKSLDREETDVYTLYILASIKADLHISEEERASFSIKTLNRDNT 1535

Query: 125  SATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR 184
             A V I+V++VND  P F  P Y   +     A+   G+ I  V A D D+G    +   
Sbjct: 1536 VAKVAITVLDVNDNPPVFEKPIYYAGVN----ANAKMGAAITLVNATDADQGKNAKIEFM 1591

Query: 185  GPYEKM----------------FSINDSGHISIVDLSA-LNTSTIQLVVVATDTGNPPRQ 227
                 +                F+I+  G IS   + A  N    +L +VA +   P   
Sbjct: 1592 IVASNLYKFGATKSTGSIVPSPFAISQDGRISANTIMAEYNQDRFELEIVARELEQPQSS 1651

Query: 228  AS 229
            AS
Sbjct: 1652 AS 1653


>gi|397490949|ref|XP_003816443.1| PREDICTED: protocadherin Fat 4 [Pan paniscus]
          Length = 4981

 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 79/270 (29%), Positives = 121/270 (44%), Gaps = 44/270 (16%)

Query: 2    INEDD-----FLQPITLV---VRAIQYDNQDRYALATLIVSKAGTSLRELQ--------- 44
            +NEDD     FL PIT V    R + Y+ Q  Y L T+     G     ++         
Sbjct: 1880 VNEDDEDGIFFLNPITGVFNLTRLLDYEVQQYYIL-TVRAEDGGGQFTTIRVYFNILDVN 1938

Query: 45   -----FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWL-SNDYGERFSISRQG 95
                 FS N YS S +ENLPV   +L        D    ++ Y + S D   +F++ + G
Sbjct: 1939 DNPPIFSLNSYSTSLMENLPVGSTVLVFNVTDADDGINSQLTYSIASGDSLGQFTVDKNG 1998

Query: 96   DISLMQCLDYETEDSYRFTVYATD------TLMTTSATVNISVVNVNDWDPRFRYPQYEL 149
             + +++ LD E++  Y   V   D      +  T++A V+I +++VND  P F  P+   
Sbjct: 1999 VLKVLKALDRESQSFYNLVVQVHDLPQIPASRFTSTAQVSIILLDVNDNPPTFLSPK--- 2055

Query: 150  FLPHIPLADLTP-GSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIND-SGHISIV-DL 204
             L +IP  + TP  +V+ K +A D D G    +  +L  P    FSI    G + +  +L
Sbjct: 2056 -LTYIP--ENTPIDTVVFKAQATDPDSGPNSYIEYTLLNPLGNKFSIGTIDGEVRLTGEL 2112

Query: 205  SALNTSTIQLVVVATDTGNPPRQASVPAIM 234
                 S   L VVATD G P   +S   ++
Sbjct: 2113 DREEVSNYTLTVVATDKGQPSLSSSTEVVV 2142



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 57/183 (31%), Positives = 89/183 (48%), Gaps = 16/183 (8%)

Query: 56   ENLPVNYVLLTVTTNKPR---DLRVKYWLSNDYGERFSISR-QGDISLMQCLDYETEDSY 111
            EN P++ V+       P    +  ++Y L N  G +FSI    G++ L   LD E   +Y
Sbjct: 2061 ENTPIDTVVFKAQATDPDSGPNSYIEYTLLNPLGNKFSIGTIDGEVRLTGELDREEVSNY 2120

Query: 112  RFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKV 168
              TV ATD     +++S  V + V+++ND +P F    Y++ +    L     G+ I +V
Sbjct: 2121 TLTVVATDKGQPSLSSSTEVVVMVLDINDNNPIFAQALYKVEINENTLT----GTDIIQV 2176

Query: 169  EAADGDKGDRVTLS---LRGPYEKMFSIND-SGHISIVD-LSALNTSTIQLVVVATDTGN 223
             AADGD+G    +    + G   + F I+  +G I++   L    T T  L V ATD G+
Sbjct: 2177 FAADGDEGTNGQVRYGIVNGNTNQEFRIDSVTGAITVAKPLDREKTPTYHLTVQATDRGS 2236

Query: 224  PPR 226
             PR
Sbjct: 2237 TPR 2239



 Score = 58.2 bits (139), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 47/158 (29%), Positives = 82/158 (51%), Gaps = 13/158 (8%)

Query: 87   ERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDTL---MTTSATVNISVVNVNDWDPRF 142
             +F+I S  G ++L+  LDYE   +Y   + A D+    + ++ T+NI +++ ND  P F
Sbjct: 1256 RQFAIDSTSGQVALIGKLDYEATPAYSLVIQAVDSGTIPLNSTCTLNIDILDENDNTPSF 1315

Query: 143  RYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTL--SLRGPY-EKMFSIN-DSGH 198
              P+  LF+    L ++  G ++  V A D D GD   L  S+ G      FSI+ ++G 
Sbjct: 1316 --PKSTLFVD--VLENMRIGELVSSVTATDSDSGDNADLYYSITGTNNHGTFSISPNTGS 1371

Query: 199  ISIVDLSALNTSTI-QLVVVATDTGNPPRQASVPAIMH 235
            I +       T ++ +L + A D G PPR +++  ++H
Sbjct: 1372 IFLAKKLDFETQSLYKLNITAKDQGRPPRSSTMSVVIH 1409



 Score = 55.5 bits (132), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 59/198 (29%), Positives = 88/198 (44%), Gaps = 24/198 (12%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLS-NDYGERFSISRQGDISLM 100
            F +  Y V+  E+ PVN     V     +   +  + Y ++  + G+ F I   G + + 
Sbjct: 996  FDQLSYEVTLSESEPVNSRFFKVQASDKDSGANGEIAYTIAEGNTGDAFGIFPDGQLYIK 1055

Query: 101  QCLDYETEDSYRFTVYATDTLMTT-SATVNISVV--NVNDWDPRFRYPQYELFLPHIPLA 157
              LD E +D Y   V A+D  +   SATVN++V+  +VND  P F    Y  +      A
Sbjct: 1056 SELDRELQDRYVLMVVASDRAVEPLSATVNVTVILEDVNDNRPLFNSTNYTFYFEEEQRA 1115

Query: 158  DLTPGSVIGKVEAADGDKGD----RVTLSLRGPYEKMFSINDSGHIS---IVDLSAL--- 207
                GS +GKV A D D G     R +  +  P  ++ +I  SG I+     D  +L   
Sbjct: 1116 ----GSFVGKVSAVDKDFGPNGEVRYSFEMMQPDFELHAI--SGEITNTHQFDRESLMRR 1169

Query: 208  -NTSTIQLVVVATDTGNP 224
              T+     VVATD G P
Sbjct: 1170 RGTAVFSFTVVATDQGLP 1187



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 56/190 (29%), Positives = 95/190 (50%), Gaps = 15/190 (7%)

Query: 56   ENLPVNYVLLTVTTNKPRDLRVKYWL-SNDYGERFSISR-QGDISLMQCLDYETEDSYRF 113
            EN PV+ ++ T+T +  R   + Y++ S + G  F I +  G +S+ Q LD+E    Y  
Sbjct: 2578 ENQPVSSLVTTITGSSLRGEPMSYYIASGNLGNTFQIDQLTGQVSISQPLDFEKIQKYVV 2637

Query: 114  TVYATDTL---MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEA 170
             + A D      ++   ++I+V++VND  P F+    + F+  I L +L+P  ++  V A
Sbjct: 2638 WIEARDGGFPPFSSYEKLDITVLDVNDNAPIFK---EDPFISEI-LENLSPRKIL-TVSA 2692

Query: 171  ADGDKGDRVTLS---LRGPYEKMFSINDS-GHI-SIVDLSALNTSTIQLVVVATDTGNPP 225
             D D G    L    + G  E  FSIN + G I S+  L     S   L + ++D G+P 
Sbjct: 2693 MDKDSGPNGQLDYEIVNGNMENSFSINHATGEIRSVRPLDREKVSHYVLTIKSSDKGSPS 2752

Query: 226  RQASVPAIMH 235
            +  SV  +++
Sbjct: 2753 QSTSVKVMIN 2762



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/101 (32%), Positives = 48/101 (47%), Gaps = 5/101 (4%)

Query: 77   VKYWLSNDYGERFSIS-RQGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNV 135
            V Y + +   + F I    GD+   + LD E    Y   V A D L ++   +NI+V +V
Sbjct: 1775 VTYTIISGADDSFRIDPESGDLIATRRLDRERRSKYSLLVRADDGLQSSDMRINITVSDV 1834

Query: 136  NDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG 176
            ND  P+F  P Y   +P     D  PGS++  + A D D G
Sbjct: 1835 NDHTPKFSRPVYSFDIPE----DTIPGSLVAAILATDDDSG 1871



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 62/225 (27%), Positives = 98/225 (43%), Gaps = 39/225 (17%)

Query: 45   FSKNEYSVSALENLPV--NYVLLTVTTNKPR--DLRVKYWL-SNDYGERFSISRQGDISL 99
            F  + YSV+  ENL      VL  V  +  +  + ++ Y L   +    F++S  G++ +
Sbjct: 2259 FELSPYSVNVPENLGTLPRTVLQVVARDDDQGSNSKLSYVLFGGNEDNAFTLSASGELGV 2318

Query: 100  MQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
             Q LD ET++ +   + ATD+    +T + T+N+ V +VND  P F    Y   +P    
Sbjct: 2319 TQSLDRETKERFVLMITATDSGSPALTGTGTINVIVDDVNDNVPTFASKAYFTTIPE--- 2375

Query: 157  ADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDS-GHI---SIVDLSALNTSTI 212
             D   G+ +  V A+D D      + + G     F+IN S G I   +++D    +  T 
Sbjct: 2376 -DAPTGTDVLLVNASDADASTNAVIRIIGG-NSQFTINPSTGQIITSALLDRETKDNYT- 2432

Query: 213  QLVVVATDTG--------------------NPPRQASVPAIMHFP 237
             LVVV +D G                    NPPR    P + H P
Sbjct: 2433 -LVVVCSDAGSPEPLSSSTSVLVTVTDVNDNPPRFQHHPYVTHIP 2476



 Score = 51.6 bits (122), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 73/237 (30%), Positives = 104/237 (43%), Gaps = 22/237 (9%)

Query: 11  ITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNE-YSVSALENLPVNYVLLTVTT 69
           I L + A       + + A L+V+    +  +  FS+ E Y VS +EN P    LL +  
Sbjct: 548 IVLNISARDQGVHPKVSYAQLVVTLLDVNDEKPVFSQPEGYDVSVVENAPTGTELLMLRA 607

Query: 70  NKPRDL----RVKYWLSNDYGERFSISR---QGDISLMQCLDYETEDSYRFTVYATD--- 119
               DL     V++ L     +R S       G +S +  LD E +  Y   V ATD   
Sbjct: 608 TD-GDLGDNGTVRFSLQEAETDRRSFRLDPVSGRLSTISSLDREEQAFYSLLVLATDLGS 666

Query: 120 TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRV 179
              ++ A +N+S++++ND  P F   QY     HI   +   GS I  V A D D G   
Sbjct: 667 PPQSSMARINVSLLDINDNSPVFYPVQY---FAHIK-ENEPGGSYITTVSATDPDLGTNG 722

Query: 180 TL--SLRGPYEKMFSIN-DSGHISI-VDLSALNTSTIQLVVVATDTGN--PPRQASV 230
           T+  S+       F +N  SG IS  + L     +  QL +VATD GN   P QA V
Sbjct: 723 TVKYSISAGDRSRFQVNAQSGVISTRMALDREEKTAYQLQIVATDGGNLQSPNQAIV 779



 Score = 51.2 bits (121), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 51/193 (26%), Positives = 97/193 (50%), Gaps = 12/193 (6%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRDLR--VKYWLS-NDYGERFSISR-QGDISLM 100
           FS+  YS    EN+ + Y + +V+ +   DL   + Y ++  D    F+I++  G ++  
Sbjct: 793 FSQVAYSFVVFENVALGYHVGSVSAST-MDLNSNISYLITTGDQKGMFAINQVTGQLTTA 851

Query: 101 QCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLT 160
             +D E +  Y+  V A+   +T    VNI+V ++ND  P F      + +    + +  
Sbjct: 852 NVIDREEQSFYQLKVVASGGTVTGDTMVNITVKDLNDNSPHFLQAIESVNV----VENWQ 907

Query: 161 PGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIND-SGHISIVDLSALNTSTIQLVVV 217
            G  I + +A D D+G    V  SL+   + +F+IN+ +G IS++    ++  + Q+ ++
Sbjct: 908 AGHNIFQAKAVDPDEGVNGMVLYSLKQNPKNLFTINEKNGTISLLGPLDVHAGSYQIEIL 967

Query: 218 ATDTGNPPRQASV 230
           A+D G P   +SV
Sbjct: 968 ASDMGVPQLSSSV 980



 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 48/149 (32%), Positives = 69/149 (46%), Gaps = 12/149 (8%)

Query: 95   GDISLMQCLDYETEDSYRFTVYATDTL----MTTSATVNISVVNVNDWDPRFRYPQYELF 150
            G I     LD ET+D+Y   V  +D      +++S +V ++V +VND  PRF   Q+  +
Sbjct: 2415 GQIITSALLDRETKDNYTLVVVCSDAGSPEPLSSSTSVLVTVTDVNDNPPRF---QHHPY 2471

Query: 151  LPHIPLADLTPGSVIGKVEAADGDKGDRVTL--SLRGPYEKMFSINDSGHISIVDLSALN 208
            + HIP   L PGS +  V   D D G    L  SL G   + F I D    +I+    LN
Sbjct: 2472 VTHIPSPTL-PGSFVFAVTVTDADIGPNSELHYSLSGRNSEKFHI-DPLRGAIMAAGPLN 2529

Query: 209  -TSTIQLVVVATDTGNPPRQASVPAIMHF 236
              S +   V   D G+ P+  S    + F
Sbjct: 2530 GASEVTFSVHVKDGGSFPKTDSTTVTVRF 2558



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 57/192 (29%), Positives = 89/192 (46%), Gaps = 24/192 (12%)

Query: 50   YSVSALENLPVNYVLLTVTTNKPRDLRV----KYWLSNDYGERFSIS-RQGDISLMQCLD 104
            +S    EN  + Y +  VTT+   D+ +    +Y +  D    F+I+   GDI + + L+
Sbjct: 2777 FSAHVPENSSLGYTVTRVTTSD-EDVGINAISRYSIM-DANLPFTINPSTGDIVISRPLN 2834

Query: 105  YETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSV 164
             E  D YR  V A D+  T S  V I V ++ND  PRF    Y L  P   L ++  GS 
Sbjct: 2835 REDTDRYRIRVSAHDSGWTVSTDVTIFVTDINDNAPRFSRTSYYLDCPE--LTEI--GSK 2890

Query: 165  IGKVEAADGDKGD--RVTLSLRGPYEKMFSIN-DSGHI---------SIVDLSALNTSTI 212
            + +V A D D+G   +V   ++   E  F IN  +G I         ++   S +N +  
Sbjct: 2891 VAQVFATDPDEGSNGQVFYFIKSQSE-YFRINATTGEIFNKQILKYQNVTGFSNVNINRH 2949

Query: 213  QLVVVATDTGNP 224
              +V ++D G P
Sbjct: 2950 SFIVTSSDRGKP 2961



 Score = 44.3 bits (103), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 43/161 (26%), Positives = 74/161 (45%), Gaps = 16/161 (9%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGERFSIS-RQGDISLM 100
            F  ++Y  + LEN P    ++ +     +   +  + Y + +   + F I    G I+  
Sbjct: 3194 FLSDDYFPTVLENAPSGTTVIHLNATDADSGTNAVIAYTVQSSDSDLFVIDPNTGVITTQ 3253

Query: 101  QCLDYETEDSYRFTVYA---TDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLA 157
              LD+ET+ SY  TV A    D    + ATVN+ +   N++ PRF    Y     +  ++
Sbjct: 3254 GFLDFETKQSYHLTVKAFNVPDEERCSFATVNVQLKGTNEYVPRFVSKLY-----YFEIS 3308

Query: 158  DLTP-GSVIGKVEAAD---GDKGDRVTLSLRGPYEKMFSIN 194
            +  P G+++G+V A+D   G  G+   L      +K F IN
Sbjct: 3309 EAAPKGTIVGEVFASDRDLGTDGEVHYLIFGNSRKKGFQIN 3349



 Score = 40.8 bits (94), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 55/108 (50%), Gaps = 7/108 (6%)

Query: 89   FSISRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYP 145
            FS+S  G +S  + +D E    +  +V   D+    M+++ TV+I+V++ ND   + R  
Sbjct: 3558 FSLSTAGVLSTTREIDREQIADFYLSVVTKDSGVPQMSSTGTVHITVIDQNDNPSQSR-- 3615

Query: 146  QYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSI 193
              E+F+ +    +L PG ++G V+  D D  D    SL      +FSI
Sbjct: 3616 TVEIFVNY--YGNLFPGGILGSVKPQDPDVLDSFHCSLTSGVTSLFSI 3661


>gi|165932370|ref|NP_078858.4| protocadherin Fat 4 precursor [Homo sapiens]
 gi|172046149|sp|Q6V0I7.2|FAT4_HUMAN RecName: Full=Protocadherin Fat 4; Short=hFat4; AltName:
            Full=Cadherin family member 14; AltName: Full=FAT tumor
            suppressor homolog 4; AltName: Full=Fat-like cadherin
            protein FAT-J; Flags: Precursor
          Length = 4981

 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 79/270 (29%), Positives = 121/270 (44%), Gaps = 44/270 (16%)

Query: 2    INEDD-----FLQPITLV---VRAIQYDNQDRYALATLIVSKAGTSLRELQ--------- 44
            +NEDD     FL PIT V    R + Y+ Q  Y L T+     G     ++         
Sbjct: 1880 VNEDDEDGIFFLNPITGVFNLTRLLDYEVQQYYIL-TVRAEDGGGQFTTIRVYFNILDVN 1938

Query: 45   -----FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWL-SNDYGERFSISRQG 95
                 FS N YS S +ENLPV   +L        D    ++ Y + S D   +F++ + G
Sbjct: 1939 DNPPIFSLNSYSTSLMENLPVGSTVLVFNVTDADDGINSQLTYSIASGDSLGQFTVDKNG 1998

Query: 96   DISLMQCLDYETEDSYRFTVYATD------TLMTTSATVNISVVNVNDWDPRFRYPQYEL 149
             + +++ LD E++  Y   V   D      +  T++A V+I +++VND  P F  P+   
Sbjct: 1999 VLKVLKALDRESQSFYNLVVQVHDLPQIPASRFTSTAQVSIILLDVNDNPPTFLSPK--- 2055

Query: 150  FLPHIPLADLTP-GSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIND-SGHISIV-DL 204
             L +IP  + TP  +V+ K +A D D G    +  +L  P    FSI    G + +  +L
Sbjct: 2056 -LTYIP--ENTPIDTVVFKAQATDPDSGPNSYIEYTLLNPLGNKFSIGTIDGEVRLTGEL 2112

Query: 205  SALNTSTIQLVVVATDTGNPPRQASVPAIM 234
                 S   L VVATD G P   +S   ++
Sbjct: 2113 DREEVSNYTLTVVATDKGQPSLSSSTEVVV 2142



 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 57/183 (31%), Positives = 89/183 (48%), Gaps = 16/183 (8%)

Query: 56   ENLPVNYVLLTVTTNKPR---DLRVKYWLSNDYGERFSISR-QGDISLMQCLDYETEDSY 111
            EN P++ V+       P    +  ++Y L N  G +FSI    G++ L   LD E   +Y
Sbjct: 2061 ENTPIDTVVFKAQATDPDSGPNSYIEYTLLNPLGNKFSIGTIDGEVRLTGELDREEVSNY 2120

Query: 112  RFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKV 168
              TV ATD     +++S  V + V+++ND +P F    Y++ +    L     G+ I +V
Sbjct: 2121 TLTVVATDKGQPSLSSSTEVVVMVLDINDNNPIFAQALYKVEINENTLT----GTDIIQV 2176

Query: 169  EAADGDKGDRVTLS---LRGPYEKMFSIND-SGHISIVD-LSALNTSTIQLVVVATDTGN 223
             AADGD+G    +    + G   + F I+  +G I++   L    T T  L V ATD G+
Sbjct: 2177 FAADGDEGTNGQVRYGIVNGNTNQEFRIDSVTGAITVAKPLDREKTPTYHLTVQATDRGS 2236

Query: 224  PPR 226
             PR
Sbjct: 2237 TPR 2239



 Score = 57.8 bits (138), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 47/158 (29%), Positives = 82/158 (51%), Gaps = 13/158 (8%)

Query: 87   ERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDTL---MTTSATVNISVVNVNDWDPRF 142
             +F+I S  G ++L+  LDYE   +Y   + A D+    + ++ T+NI +++ ND  P F
Sbjct: 1256 RQFAIDSTSGQVTLIGKLDYEATPAYSLVIQAVDSGTIPLNSTCTLNIDILDENDNTPSF 1315

Query: 143  RYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTL--SLRGPY-EKMFSIN-DSGH 198
              P+  LF+    L ++  G ++  V A D D GD   L  S+ G      FSI+ ++G 
Sbjct: 1316 --PKSTLFVD--VLENMRIGELVSSVTATDSDSGDNADLYYSITGTNNHGTFSISPNTGS 1371

Query: 199  ISIVDLSALNTSTI-QLVVVATDTGNPPRQASVPAIMH 235
            I +       T ++ +L + A D G PPR +++  ++H
Sbjct: 1372 IFLAKKLDFETQSLYKLNITAKDQGRPPRSSTMSVVIH 1409



 Score = 54.7 bits (130), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 62/225 (27%), Positives = 98/225 (43%), Gaps = 39/225 (17%)

Query: 45   FSKNEYSVSALENLPV--NYVLLTVTTNKPR--DLRVKYWL-SNDYGERFSISRQGDISL 99
            F  + YSV+  ENL      +L  V  +  R  + ++ Y L   +    F++S  G++ +
Sbjct: 2259 FELSPYSVNVPENLGTLPRTILQVVARDDDRGSNSKLSYVLFGGNEDNAFTLSASGELGV 2318

Query: 100  MQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
             Q LD ET++ +   + ATD+    +T + T+N+ V +VND  P F    Y   +P    
Sbjct: 2319 TQSLDRETKERFVLMITATDSGSPALTGTGTINVIVDDVNDNVPTFASKAYFTTIPE--- 2375

Query: 157  ADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDS-GHI---SIVDLSALNTSTI 212
             D   G+ +  V A+D D      + + G     F+IN S G I   +++D    +  T 
Sbjct: 2376 -DAPTGTDVLLVNASDADASKNAVIRIIGG-NSQFTINPSTGQIITSALLDRETKDNYT- 2432

Query: 213  QLVVVATDTG--------------------NPPRQASVPAIMHFP 237
             LVVV +D G                    NPPR    P + H P
Sbjct: 2433 -LVVVCSDAGSPEPLSSSTSVLVTVTDVNDNPPRFQHHPYVTHIP 2476



 Score = 54.7 bits (130), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 58/198 (29%), Positives = 88/198 (44%), Gaps = 24/198 (12%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLS-NDYGERFSISRQGDISLM 100
            F +  Y V+  E+ PVN     V     +   +  + Y ++  + G+ F I   G + + 
Sbjct: 996  FDQLSYEVTLSESEPVNSRFFKVQASDKDSGANGEIAYTIAEGNTGDAFGIFPDGQLYIK 1055

Query: 101  QCLDYETEDSYRFTVYATDTLMTT-SATVNISVV--NVNDWDPRFRYPQYELFLPHIPLA 157
              LD E +D Y   V A+D  +   SATVN++V+  +VND  P F    Y  +      A
Sbjct: 1056 SELDRELQDRYVLMVVASDRAVEPLSATVNVTVILEDVNDNRPLFNSTNYTFYFEEEQRA 1115

Query: 158  DLTPGSVIGKVEAADGDKGD----RVTLSLRGPYEKMFSINDSGHIS---IVDLSAL--- 207
                GS +GKV A D D G     R +  +  P  ++ +I  SG I+     D  +L   
Sbjct: 1116 ----GSFVGKVSAVDKDFGPNGEVRYSFEMVQPDFELHAI--SGEITNTHQFDRESLMRR 1169

Query: 208  -NTSTIQLVVVATDTGNP 224
              T+     V+ATD G P
Sbjct: 1170 RGTAVFSFTVIATDQGIP 1187



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 56/190 (29%), Positives = 95/190 (50%), Gaps = 15/190 (7%)

Query: 56   ENLPVNYVLLTVTTNKPRDLRVKYWL-SNDYGERFSISR-QGDISLMQCLDYETEDSYRF 113
            EN PV+ ++ T+T +  R   + Y++ S + G  F I +  G +S+ Q LD+E    Y  
Sbjct: 2578 ENQPVSSLVTTITGSSLRGEPMSYYIASGNLGNTFQIDQLTGQVSISQPLDFEKIQKYVV 2637

Query: 114  TVYATDTL---MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEA 170
             + A D      ++   ++I+V++VND  P F+    + F+  I L +L+P  ++  V A
Sbjct: 2638 WIEARDGGFPPFSSYEKLDITVLDVNDNAPIFK---EDPFISEI-LENLSPRKIL-TVSA 2692

Query: 171  ADGDKGDRVTLS---LRGPYEKMFSINDS-GHI-SIVDLSALNTSTIQLVVVATDTGNPP 225
             D D G    L    + G  E  FSIN + G I S+  L     S   L + ++D G+P 
Sbjct: 2693 MDKDSGPNGQLDYEIVNGNMENSFSINHATGEIRSVRPLDREKVSHYVLTIKSSDKGSPS 2752

Query: 226  RQASVPAIMH 235
            +  SV  +++
Sbjct: 2753 QSTSVKVMIN 2762



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/101 (32%), Positives = 48/101 (47%), Gaps = 5/101 (4%)

Query: 77   VKYWLSNDYGERFSIS-RQGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNV 135
            V Y + +   + F I    GD+   + LD E    Y   V A D L ++   +NI+V +V
Sbjct: 1775 VTYTIISGADDSFRIDPESGDLIATRRLDRERRSKYSLLVRADDGLQSSDMRINITVSDV 1834

Query: 136  NDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG 176
            ND  P+F  P Y   +P     D  PGS++  + A D D G
Sbjct: 1835 NDHTPKFSRPVYSFDIPE----DTIPGSLVAAILATDDDSG 1871



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 58/192 (30%), Positives = 90/192 (46%), Gaps = 24/192 (12%)

Query: 50   YSVSALENLPVNYVLLTVTTNKPRDLRV----KYWLSNDYGERFSIS-RQGDISLMQCLD 104
            +S    EN P+ Y +  VTT+   D+ +    +Y +  D    F+I+   GDI + + L+
Sbjct: 2777 FSAHVPENSPLGYTVTRVTTSD-EDIGINAISRYSIM-DASLPFTINPSTGDIVISRPLN 2834

Query: 105  YETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSV 164
             E  D YR  V A D+  T S  V I V ++ND  PRF    Y L  P   L ++  GS 
Sbjct: 2835 REDTDRYRIRVSAHDSGWTVSTDVTIFVTDINDNAPRFSRTSYYLDCPE--LTEI--GSK 2890

Query: 165  IGKVEAADGDKGD--RVTLSLRGPYEKMFSIN-DSGHI---------SIVDLSALNTSTI 212
            + +V A D D+G   +V   ++   E  F IN  +G I         ++   S +N +  
Sbjct: 2891 VTQVFATDPDEGSNGQVFYFIKSQSE-YFRINATTGEIFNKQILKYQNVTGFSNVNINRH 2949

Query: 213  QLVVVATDTGNP 224
              +V ++D G P
Sbjct: 2950 SFIVTSSDRGKP 2961



 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 51/193 (26%), Positives = 97/193 (50%), Gaps = 12/193 (6%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRDLR--VKYWLS-NDYGERFSISR-QGDISLM 100
           FS+  YS    EN+ + Y + +V+ +   DL   + Y ++  D    F+I++  G ++  
Sbjct: 793 FSQVAYSFVVFENVALGYHVGSVSAST-MDLNSNISYLITTGDQKGMFAINQVTGQLTTA 851

Query: 101 QCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLT 160
             +D E +  Y+  V A+   +T    VNI+V ++ND  P F      + +    + +  
Sbjct: 852 NVIDREEQSFYQLKVVASGGTVTGDTMVNITVKDLNDNSPHFLQAIESVNV----VENWQ 907

Query: 161 PGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIND-SGHISIVDLSALNTSTIQLVVV 217
            G  I + +A D D+G    V  SL+   + +F+IN+ +G IS++    ++  + Q+ ++
Sbjct: 908 AGHSIFQAKAVDPDEGVNGMVLYSLKQNPKNLFAINEKNGTISLLGPLDVHAGSYQIEIL 967

Query: 218 ATDTGNPPRQASV 230
           A+D G P   +SV
Sbjct: 968 ASDMGVPQLSSSV 980



 Score = 51.6 bits (122), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 73/237 (30%), Positives = 104/237 (43%), Gaps = 22/237 (9%)

Query: 11  ITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNE-YSVSALENLPVNYVLLTVTT 69
           I L + A       + + A L+V+    +  +  FS+ E Y VS +EN P    LL +  
Sbjct: 548 IVLNISARDQGVHPKVSYAQLVVTLLDVNDEKPVFSQPEGYDVSVVENAPTGTELLMLRA 607

Query: 70  NKPRDL----RVKYWLSNDYGERFSISR---QGDISLMQCLDYETEDSYRFTVYATD--- 119
               DL     V++ L     +R S       G +S +  LD E +  Y   V ATD   
Sbjct: 608 TD-GDLGDNGTVRFSLQEAETDRRSFRLDPVSGRLSTISSLDREEQAFYSLLVLATDLGS 666

Query: 120 TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRV 179
              ++ A +N+S++++ND  P F   QY     HI   +   GS I  V A D D G   
Sbjct: 667 PPQSSMARINVSLLDINDNSPVFYPVQY---FAHIK-ENEPGGSYITTVSATDPDLGTNG 722

Query: 180 TL--SLRGPYEKMFSIN-DSGHISI-VDLSALNTSTIQLVVVATDTGN--PPRQASV 230
           T+  S+       F +N  SG IS  + L     +  QL +VATD GN   P QA V
Sbjct: 723 TVKYSISAGDRSRFQVNAQSGVISTRMALDREEKTAYQLQIVATDGGNLQSPNQAIV 779



 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 48/149 (32%), Positives = 69/149 (46%), Gaps = 12/149 (8%)

Query: 95   GDISLMQCLDYETEDSYRFTVYATDTL----MTTSATVNISVVNVNDWDPRFRYPQYELF 150
            G I     LD ET+D+Y   V  +D      +++S +V ++V +VND  PRF   Q+  +
Sbjct: 2415 GQIITSALLDRETKDNYTLVVVCSDAGSPEPLSSSTSVLVTVTDVNDNPPRF---QHHPY 2471

Query: 151  LPHIPLADLTPGSVIGKVEAADGDKGDRVTL--SLRGPYEKMFSINDSGHISIVDLSALN 208
            + HIP   L PGS +  V   D D G    L  SL G   + F I D    +I+    LN
Sbjct: 2472 VTHIPSPTL-PGSFVFAVTVTDADIGPNSELHYSLSGRNSEKFHI-DPLRGAIMAAGPLN 2529

Query: 209  -TSTIQLVVVATDTGNPPRQASVPAIMHF 236
              S +   V   D G+ P+  S    + F
Sbjct: 2530 GASEVTFSVHVKDGGSFPKTDSTTVTVRF 2558



 Score = 44.7 bits (104), Expect = 0.069,   Method: Compositional matrix adjust.
 Identities = 44/161 (27%), Positives = 74/161 (45%), Gaps = 16/161 (9%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGERFSIS-RQGDISLM 100
            F  ++Y  + LEN P    ++ +     +   +  + Y + +   + F I    G I+  
Sbjct: 3194 FLSDDYFPTVLENAPSGTTVIHLNATDADSGTNAVIAYTVQSSDSDLFVIDPNTGVITTQ 3253

Query: 101  QCLDYETEDSYRFTVYA---TDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLA 157
              LD+ET+ SY  TV A    D    + ATVNI +   N++ PRF    Y     +  ++
Sbjct: 3254 GFLDFETKQSYHLTVKAFNVPDEERCSFATVNIQLKGTNEYVPRFVSKLY-----YFEIS 3308

Query: 158  DLTP-GSVIGKVEAAD---GDKGDRVTLSLRGPYEKMFSIN 194
            +  P G+++G+V A+D   G  G+   L      +K F IN
Sbjct: 3309 EAAPKGTIVGEVFASDRDLGTDGEVHYLIFGNSRKKGFQIN 3349



 Score = 40.8 bits (94), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 55/108 (50%), Gaps = 7/108 (6%)

Query: 89   FSISRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYP 145
            FS+S  G +S  + +D E    +  +V   D+    M+++ TV+I+V++ ND   + R  
Sbjct: 3558 FSLSTAGVLSTTREIDREQIADFYLSVVTKDSGVPQMSSTGTVHITVIDQNDNPSQSR-- 3615

Query: 146  QYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSI 193
              E+F+ +    +L PG ++G V+  D D  D    SL      +FSI
Sbjct: 3616 TVEIFVNY--YGNLFPGGILGSVKPQDPDVLDSFHCSLTSGVTSLFSI 3661


>gi|426345436|ref|XP_004040420.1| PREDICTED: protocadherin Fat 4 [Gorilla gorilla gorilla]
          Length = 4981

 Score = 72.0 bits (175), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 79/270 (29%), Positives = 121/270 (44%), Gaps = 44/270 (16%)

Query: 2    INEDD-----FLQPITLV---VRAIQYDNQDRYALATLIVSKAGTSLRELQ--------- 44
            +NEDD     FL PIT V    R + Y+ Q  Y L T+     G     ++         
Sbjct: 1880 VNEDDEDGIFFLNPITGVFNLTRLLDYEVQQYYIL-TVRAEDGGGQFTTIRVYFNILDVN 1938

Query: 45   -----FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWL-SNDYGERFSISRQG 95
                 FS N YS S +ENLPV   +L        D    ++ Y + S D   +F++ + G
Sbjct: 1939 DNPPVFSLNSYSTSLMENLPVGSTVLVFNVTDADDGINSQLTYSIASGDSLGQFTVDKNG 1998

Query: 96   DISLMQCLDYETEDSYRFTVYATD------TLMTTSATVNISVVNVNDWDPRFRYPQYEL 149
             + +++ LD E++  Y   V   D      +  T++A V+I +++VND  P F  P+   
Sbjct: 1999 VLKVLKALDRESQSFYNLVVQVHDLPQIPASRFTSTAQVSIILLDVNDNPPTFLSPK--- 2055

Query: 150  FLPHIPLADLTP-GSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIND-SGHISIV-DL 204
             L +IP  + TP  +V+ K +A D D G    +  +L  P    FSI    G + +  +L
Sbjct: 2056 -LTYIP--ENTPIDTVVFKAQATDPDSGPNSYIEYTLLNPLGNKFSIGTIDGEVRLTGEL 2112

Query: 205  SALNTSTIQLVVVATDTGNPPRQASVPAIM 234
                 S   L VVATD G P   +S   ++
Sbjct: 2113 DREEVSNYTLTVVATDKGQPSLSSSTEVVV 2142



 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 57/183 (31%), Positives = 89/183 (48%), Gaps = 16/183 (8%)

Query: 56   ENLPVNYVLLTVTTNKPR---DLRVKYWLSNDYGERFSISR-QGDISLMQCLDYETEDSY 111
            EN P++ V+       P    +  ++Y L N  G +FSI    G++ L   LD E   +Y
Sbjct: 2061 ENTPIDTVVFKAQATDPDSGPNSYIEYTLLNPLGNKFSIGTIDGEVRLTGELDREEVSNY 2120

Query: 112  RFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKV 168
              TV ATD     +++S  V + V+++ND +P F    Y++ +    L     G+ I +V
Sbjct: 2121 TLTVVATDKGQPSLSSSTEVVVMVLDINDNNPIFAQALYKVEINENTLT----GTDIIQV 2176

Query: 169  EAADGDKGDRVTLS---LRGPYEKMFSIND-SGHISIVD-LSALNTSTIQLVVVATDTGN 223
             AADGD+G    +    + G   + F I+  +G I++   L    T T  L V ATD G+
Sbjct: 2177 FAADGDEGTNGQVRYGIVNGNTNQEFRIDSVTGAITVAKPLDREKTPTYHLTVQATDRGS 2236

Query: 224  PPR 226
             PR
Sbjct: 2237 TPR 2239



 Score = 58.2 bits (139), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 47/158 (29%), Positives = 82/158 (51%), Gaps = 13/158 (8%)

Query: 87   ERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDTL---MTTSATVNISVVNVNDWDPRF 142
             +F+I S  G ++L+  LDYE   +Y   + A D+    + ++ T+NI +++ ND  P F
Sbjct: 1256 RQFAIDSTSGQVALIGKLDYEATPAYSLVIQAVDSGTIPLNSTCTLNIDILDENDNTPSF 1315

Query: 143  RYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTL--SLRGPY-EKMFSIN-DSGH 198
              P+  LF+    L ++  G ++  V A D D GD   L  S+ G      FSI+ ++G 
Sbjct: 1316 --PKSTLFVD--VLENMRIGELVSSVTATDSDSGDNADLYYSITGTNNHGTFSISPNTGS 1371

Query: 199  ISIVDLSALNTSTI-QLVVVATDTGNPPRQASVPAIMH 235
            I +       T ++ +L + A D G PPR +++  ++H
Sbjct: 1372 IFLAKKLDFETQSLYKLNITAKDQGRPPRSSTMSVVIH 1409



 Score = 54.7 bits (130), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 58/198 (29%), Positives = 88/198 (44%), Gaps = 24/198 (12%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLS-NDYGERFSISRQGDISLM 100
            F +  Y V+  E+ PVN     V     +   +  + Y ++  + G+ F I   G + + 
Sbjct: 996  FDQLSYEVTLSESEPVNSRFFKVQASDKDSGANGEIAYTIAEGNTGDAFGIFPDGQLYIK 1055

Query: 101  QCLDYETEDSYRFTVYATDTLMTT-SATVNISVV--NVNDWDPRFRYPQYELFLPHIPLA 157
              LD E +D Y   V A+D  +   SATVN++V+  +VND  P F    Y  +      A
Sbjct: 1056 SELDRELQDRYVLMVVASDRAVEPLSATVNVTVILEDVNDNRPLFNSTNYTFYFEEEQRA 1115

Query: 158  DLTPGSVIGKVEAADGDKGD----RVTLSLRGPYEKMFSINDSGHIS---IVDLSAL--- 207
                GS +GKV A D D G     R +  +  P  ++ +I  SG I+     D  +L   
Sbjct: 1116 ----GSFVGKVSAVDKDFGPNGEVRYSFEMVQPDFELHAI--SGEITNTHQFDRESLMRR 1169

Query: 208  -NTSTIQLVVVATDTGNP 224
              T+     V+ATD G P
Sbjct: 1170 RGTAVFSFTVIATDQGLP 1187



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 62/225 (27%), Positives = 99/225 (44%), Gaps = 39/225 (17%)

Query: 45   FSKNEYSVSALENL-PVNYVLLTVTT---NKPRDLRVKYWL-SNDYGERFSISRQGDISL 99
            F  + YSVS  ENL  +   +L V     ++  + ++ Y L   +    F++S  G++ +
Sbjct: 2259 FEPSPYSVSVPENLGTLPRTILQVVARDDDQGSNSKLSYVLFGGNEDNAFTLSASGELGV 2318

Query: 100  MQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
             Q LD ET++ +   + ATD+    +T + T+N+ V +VND  P F    Y   +P    
Sbjct: 2319 TQSLDRETKERFVLMITATDSGSPALTGTGTINVIVDDVNDNVPTFASNAYFTTIPE--- 2375

Query: 157  ADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDS-GHI---SIVDLSALNTSTI 212
             D   G+ +  V A+D D      + + G     F+IN S G I   +++D    +  T 
Sbjct: 2376 -DAPTGTDVLLVNASDADASTNAVIRIIGG-NSQFTINPSTGQIITSALLDRETKDNYT- 2432

Query: 213  QLVVVATDTG--------------------NPPRQASVPAIMHFP 237
             LVVV +D G                    NPPR    P + H P
Sbjct: 2433 -LVVVCSDAGSPEPLSSSTSVLVTVTDVNDNPPRFQHHPYVTHIP 2476



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 56/190 (29%), Positives = 95/190 (50%), Gaps = 15/190 (7%)

Query: 56   ENLPVNYVLLTVTTNKPRDLRVKYWL-SNDYGERFSISR-QGDISLMQCLDYETEDSYRF 113
            EN PV+ ++ T+T +  R   + Y++ S + G  F I +  G +S+ Q LD+E    Y  
Sbjct: 2578 ENQPVSSLVTTITGSSLRGEPMSYYIASGNLGNTFQIDQLTGQVSISQPLDFEKIQKYVV 2637

Query: 114  TVYATDTL---MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEA 170
             + A D      ++   ++I+V++VND  P F+    + F+  I L +L+P  ++  V A
Sbjct: 2638 WIEARDGGFPPFSSYEKLDITVLDVNDNAPIFK---EDPFISEI-LENLSPRKIL-TVSA 2692

Query: 171  ADGDKGDRVTLS---LRGPYEKMFSINDS-GHI-SIVDLSALNTSTIQLVVVATDTGNPP 225
             D D G    L    + G  E  FSIN + G I S+  L     S   L + ++D G+P 
Sbjct: 2693 MDKDSGPNGQLDYEIVNGNMENSFSINHATGEIRSVRPLDREKVSHYVLTIKSSDKGSPS 2752

Query: 226  RQASVPAIMH 235
            +  SV  +++
Sbjct: 2753 QSTSVKVMIN 2762



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 57/192 (29%), Positives = 88/192 (45%), Gaps = 24/192 (12%)

Query: 50   YSVSALENLPVNYVLLTVTTNKPRDLRV----KYWLSNDYGERFSIS-RQGDISLMQCLD 104
            +S    EN P+ Y +  VTT+   D+ +    +Y +  D    F+I+   GDI + + L+
Sbjct: 2777 FSAHVPENSPLGYTVTRVTTSD-EDIGINAISRYSIM-DASLPFTINPSTGDIVISRPLN 2834

Query: 105  YETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSV 164
             E  D YR  V A D+  T S  V I V ++ND  PRF    Y L  P +       GS 
Sbjct: 2835 REDTDRYRIRVSAHDSGWTVSTDVTIFVTDINDNAPRFSRTSYYLDCPEL----TETGSK 2890

Query: 165  IGKVEAADGDKGD--RVTLSLRGPYEKMFSIN-DSGHI---------SIVDLSALNTSTI 212
            + +V A D D+G   +V   ++   E  F IN  +G I         ++   S +N +  
Sbjct: 2891 VTQVFATDPDEGSNGQVFYFIKSQSE-YFRINATTGEIFNKQILKYQNVTGFSNVNINRH 2949

Query: 213  QLVVVATDTGNP 224
              +V ++D G P
Sbjct: 2950 SFIVTSSDRGKP 2961



 Score = 52.0 bits (123), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 74/237 (31%), Positives = 104/237 (43%), Gaps = 22/237 (9%)

Query: 11  ITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNE-YSVSALENLPVNYVLLTVTT 69
           I L + A       + + A L+V+    +  +  FS+ E Y VS +EN P    LL +  
Sbjct: 548 IVLNISARDQGVHPKVSYAQLVVTLLDVNDEKPVFSQPEGYDVSVVENAPTGTELLMLRA 607

Query: 70  NKPRDL----RVKYWLSNDYGERFSISR---QGDISLMQCLDYETEDSYRFTVYATD--- 119
               DL     V++ L     +R S       G +S +  LD E +  Y   V ATD   
Sbjct: 608 TD-GDLGDNGTVRFSLQEAETDRRSFRLDPVSGRLSTISSLDREEQAFYSLLVLATDLGS 666

Query: 120 TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRV 179
              ++ A +N+S++++ND  P F   QY     HI   +   GS I  V A D D G   
Sbjct: 667 PPQSSMARINVSLLDINDNSPVFYPVQY---FAHIK-ENEPGGSYITTVSATDPDLGTNG 722

Query: 180 TL--SLRGPYEKMFSIN-DSGHISI-VDLSALNTSTIQLVVVATDTGN--PPRQASV 230
           T+  S+       F +N  SG IS  + L     +  QL VVATD GN   P QA V
Sbjct: 723 TVKYSISAGDRSRFQVNAQSGVISTRMALDREEKTAYQLQVVATDGGNLQSPNQAIV 779



 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 51/193 (26%), Positives = 97/193 (50%), Gaps = 12/193 (6%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRDLR--VKYWLS-NDYGERFSISR-QGDISLM 100
           FS+  YS    EN+ + Y + +V+ +   DL   + Y ++  D    F+I++  G ++  
Sbjct: 793 FSQVAYSFVVFENVALGYHVGSVSAST-MDLNSNISYLITTGDQKGMFAINQVTGQLTTA 851

Query: 101 QCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLT 160
             +D E +  Y+  V A+   +T    VNI+V ++ND  P F      + +    + +  
Sbjct: 852 NVIDREEQSFYQLKVVASGGTVTGDTMVNITVKDLNDNSPHFLQAIESVNV----VENWQ 907

Query: 161 PGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIND-SGHISIVDLSALNTSTIQLVVV 217
            G  I + +A D D+G    V  SL+   + +F+IN+ +G IS++    ++  + Q+ ++
Sbjct: 908 AGHSIFQAKAVDPDEGVNGMVLYSLKQNPKNLFAINEKNGTISLLGPLDVHAGSYQIEIL 967

Query: 218 ATDTGNPPRQASV 230
           A+D G P   +SV
Sbjct: 968 ASDMGVPQLSSSV 980



 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 48/149 (32%), Positives = 69/149 (46%), Gaps = 12/149 (8%)

Query: 95   GDISLMQCLDYETEDSYRFTVYATDTL----MTTSATVNISVVNVNDWDPRFRYPQYELF 150
            G I     LD ET+D+Y   V  +D      +++S +V ++V +VND  PRF   Q+  +
Sbjct: 2415 GQIITSALLDRETKDNYTLVVVCSDAGSPEPLSSSTSVLVTVTDVNDNPPRF---QHHPY 2471

Query: 151  LPHIPLADLTPGSVIGKVEAADGDKGDRVTL--SLRGPYEKMFSINDSGHISIVDLSALN 208
            + HIP   L PGS +  V   D D G    L  SL G   + F I D    +I+    LN
Sbjct: 2472 VTHIPSPTL-PGSFVFAVTVTDADIGPNSELHYSLSGRNSEKFHI-DPLRGAIMAAGPLN 2529

Query: 209  -TSTIQLVVVATDTGNPPRQASVPAIMHF 236
              S +   V   D G+ P+  S    + F
Sbjct: 2530 GASEVTFSVHVKDGGSFPKTDSTTVTVRF 2558



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 32/101 (31%), Positives = 47/101 (46%), Gaps = 5/101 (4%)

Query: 77   VKYWLSNDYGERFSIS-RQGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNV 135
            V Y + +   + F I    GD+   + LD E    Y   V A D L ++   +NI+V +V
Sbjct: 1775 VTYTIISGADDSFRIDPESGDLIATRRLDRERRSKYSLLVRADDGLQSSDMRINITVSDV 1834

Query: 136  NDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG 176
            ND  P+F    Y   +P     D  PGS++  + A D D G
Sbjct: 1835 NDHTPKFSRHVYSFDIPE----DTIPGSLVAAILATDDDSG 1871



 Score = 44.3 bits (103), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 43/161 (26%), Positives = 74/161 (45%), Gaps = 16/161 (9%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGERFSIS-RQGDISLM 100
            F  ++Y  + LEN P    ++ +     +   +  + Y + +   + F I    G I+  
Sbjct: 3194 FLSDDYFPTVLENAPSGTTVIHLNATDADSGTNAVIAYTVQSSDSDLFVIDPNTGVITTQ 3253

Query: 101  QCLDYETEDSYRFTVYA---TDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLA 157
              LD+ET+ SY  TV A    D    + ATVN+ +   N++ PRF    Y     +  ++
Sbjct: 3254 GFLDFETKQSYHLTVKAFNVPDEERCSFATVNVQLKGTNEYVPRFVSKLY-----YFEIS 3308

Query: 158  DLTP-GSVIGKVEAAD---GDKGDRVTLSLRGPYEKMFSIN 194
            +  P G+++G+V A+D   G  G+   L      +K F IN
Sbjct: 3309 EAAPKGTIVGEVFASDRDLGTDGEVHYLIFGNSRKKGFQIN 3349



 Score = 40.8 bits (94), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 55/108 (50%), Gaps = 7/108 (6%)

Query: 89   FSISRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYP 145
            FS+S  G +S  + +D E    +  +V   D+    M+++ TV+I+V++ ND   + R  
Sbjct: 3558 FSLSTAGVLSTTREIDREQIADFYLSVVTKDSGVPQMSSTGTVHITVIDQNDNPSQSR-- 3615

Query: 146  QYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSI 193
              E+F+ +    +L PG ++G V+  D D  D    SL      +FSI
Sbjct: 3616 TVEIFVNY--YGNLFPGGILGSVKPQDPDVLDSFHCSLTSGVTSLFSI 3661


>gi|380011903|ref|XP_003690033.1| PREDICTED: LOW QUALITY PROTEIN: protein dachsous-like, partial
           [Apis florea]
          Length = 2820

 Score = 72.0 bits (175), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 73/238 (30%), Positives = 105/238 (44%), Gaps = 27/238 (11%)

Query: 16  RAIQYDNQDRYALATLIVSKAGTSLR-----ELQ--------FSKNEYSVSALENLPVNY 62
           R + Y+ Q R+ L    V   G +       E+Q        F +NEY V   E   ++ 
Sbjct: 412 RRLDYETQQRHGLLIRAVDGGGLTANLSLSVEVQDVNDNPPVFERNEYHVEVPEGAKLDS 471

Query: 63  VLLTVTT---NKPRDLRVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATD 119
            +L VT    +   + R+ Y L      R S    G I L Q LD E+ D +  TV ATD
Sbjct: 472 QILQVTAVDLDTGNNARLSYRLQGSTAFRIS-PNTGWIYLAQALDRESLDRHALTVLATD 530

Query: 120 T---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG 176
                 T S +V ++V++ ND DPRF    Y   L    L +L  G+++G V A+D D G
Sbjct: 531 NGSPAATASTSVLVTVLDDNDNDPRFEKEFYGFEL----LENLPSGTLVGSVSASDPDLG 586

Query: 177 DRVTLSLRG-PYEKMFSIN-DSGHISIVDLSALNTSTI-QLVVVATDTGNPPRQASVP 231
               L          F+++ D+G I   +     T  + +LV+ A D G P R A VP
Sbjct: 587 KNALLRYAVVQANSSFTVDPDTGEIITREPLDRETKGVHELVLEARDQGTPSRAARVP 644



 Score = 55.8 bits (133), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 63/246 (25%), Positives = 114/246 (46%), Gaps = 30/246 (12%)

Query: 8   LQPITLVVR---AIQYDNQDRYALATLIVSKAGTSLRELQ------------FSKNEYSV 52
           + P+T ++R    +  + +D+Y L+    +   T   +++            F  +   +
Sbjct: 300 MDPVTGMIRIRVPLDRETRDKYILSVEARNGVSTGYCQVELNVEDVNDNGPTFPASSVRI 359

Query: 53  SALENLPVN---YVLLTVTTNKPRDLRVKYWLSNDYGERFSI-SRQGDISLMQCLDYETE 108
           S  E+ P++   YV   V  +      ++Y L  +  + F I +R G++ L + LDYET+
Sbjct: 360 SVAESHPLHAPLYVAHAVDPDVVPPHPIRYALGQNSNDLFGIDARSGELYLSRRLDYETQ 419

Query: 109 DSYRFTVYATD-TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGK 167
             +   + A D   +T + ++++ V +VND  P F   +Y + +P     D    S I +
Sbjct: 420 QRHGLLIRAVDGGGLTANLSLSVEVQDVNDNPPVFERNEYHVEVPEGAKLD----SQILQ 475

Query: 168 VEAADGDKGDRVTLSLRGPYEKMFSIN-DSGHISIVDLSALNTSTIQ---LVVVATDTGN 223
           V A D D G+   LS R      F I+ ++G I +    AL+  ++    L V+ATD G+
Sbjct: 476 VTAVDLDTGNNARLSYRLQGSTAFRISPNTGWIYLA--QALDRESLDRHALTVLATDNGS 533

Query: 224 PPRQAS 229
           P   AS
Sbjct: 534 PAATAS 539



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 52/170 (30%), Positives = 84/170 (49%), Gaps = 18/170 (10%)

Query: 77   VKYWLSNDYGERFSI---SRQGDISLMQCLDYETEDSYRFTVYATDTL-----MTTSATV 128
            ++Y L  ++  R S    S  G ++L + LD E    Y   + A+D       + ++ T 
Sbjct: 909  LRYGLVAEFPSRDSFAVDSLTGALTLAKPLDREERAEYTLILRASDRAPPGERLASTVTA 968

Query: 129  NISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGD--RVTLSLRGP 186
             I V++ ND DP F  P+    +   P  DL PG+ + +V A D D GD  RV+  +   
Sbjct: 969  RIIVLDQNDNDPVFVAPE-STKVAVTP--DLLPGATLVRVVAVDKDAGDNGRVSYVITSA 1025

Query: 187  YEKM-FSIN-DSGHISIVDLSALNTSTIQLVVVATDTGNPPRQASVPAIM 234
             E+  FS+  +SG   IV L      T +L + A D G+PPR++++  I+
Sbjct: 1026 NEEARFSVGYESG---IVSLERPMARTTELEITANDHGSPPRKSTLRLIL 1072



 Score = 51.6 bits (122), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 63/210 (30%), Positives = 92/210 (43%), Gaps = 21/210 (10%)

Query: 32   IVSKAGTSLRELQFSKN-----EYSV-SALENLPVNYVLLTVTTN---KPRDLRVKYWLS 82
            +   A  S+R +  + N     E+SV S  E   V  VL T+T N       L  ++  +
Sbjct: 1769 LTGTAALSVRVIDINDNQPTFPEHSVISVSEGTAVGTVLTTITANDVDSSPALTYRFGNA 1828

Query: 83   NDYGERFSISR-QGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPR 141
             D G  FSI R  G + L + LD ET   Y   V A+D +   +  + + V ++ND  PR
Sbjct: 1829 TDPGP-FSIDRYGGKVVLRRRLDAETRSEYSLQVVASDGIHEATTDLIVRVTDLNDNAPR 1887

Query: 142  FRYPQYELFLPHIPLADLTPGSVIGKVEAADGD---KGDRVTLSLRGPYEKMFSINDSGH 198
            F+   Y   LP     +L     I  V A D D   +  RV   L     K FS++    
Sbjct: 1888 FQQSAYIATLPEGRGGELQE---IVTVNATDDDLTEENSRVRYHLLR-ATKGFSVHPVTG 1943

Query: 199  ISIVDLSALNT---STIQLVVVATDTGNPP 225
            +  V+ +A+       ++L VVA D G PP
Sbjct: 1944 VVTVNRTAIPRPLPKEVELAVVAEDYGKPP 1973



 Score = 47.8 bits (112), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 57/194 (29%), Positives = 88/194 (45%), Gaps = 19/194 (9%)

Query: 49   EYSVSALENLPVNYVLLTVTTNKPR---DLRVKYWLSNDYGERFSISR-QGDISLMQCLD 104
            +Y  +  E++  +  ++TV    P    + ++ Y ++ +    F +    G ++    LD
Sbjct: 1329 KYVATVSEDVAPDSSVMTVRATDPDQGVNGKITYAIAEETSWLFRVDNLTGVVTTAGALD 1388

Query: 105  YETEDSYRFTVYATDT----LMTTSATVNISVVNVNDWDPRFR-YPQYELFLPHIPLADL 159
             E + +Y F V ATD       +++  V I V +VND  P F  YP    F   + +   
Sbjct: 1389 RERQSAYNFVVVATDGGKYDARSSTIPVEIRVSDVNDNAPVFEEYP----FRARVSIG-T 1443

Query: 160  TPGSVIGKVEAADGDKG--DRVTLSLRGPYEK-MFSINDS-GHI-SIVDLSALNTSTIQL 214
             P   I +V A D D+G    +  S     EK  F I+ S G + + + LS  N  T  L
Sbjct: 1444 QPEKNILRVVATDIDEGANGEIVYSFLHEQEKPKFRIHPSTGAVTAALSLSQDNGKTYHL 1503

Query: 215  VVVATDTGNPPRQA 228
             VVA D GNPPR A
Sbjct: 1504 EVVARDKGNPPRSA 1517



 Score = 45.4 bits (106), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 58/247 (23%), Positives = 113/247 (45%), Gaps = 38/247 (15%)

Query: 14  VVRAIQYDNQDRYALATLI------VSKAGTSL---------RELQFSKNEYSVSALENL 58
           + +A+  ++ DR+AL  L        + A TS+          + +F K  Y    LENL
Sbjct: 510 LAQALDRESLDRHALTVLATDNGSPAATASTSVLVTVLDDNDNDPRFEKEFYGFELLENL 569

Query: 59  PVNYVLLTVTTNKP---RDLRVKYWLSNDYGERFSISRQ-GDISLMQCLDYETEDSYRFT 114
           P   ++ +V+ + P   ++  ++Y +       F++    G+I   + LD ET+  +   
Sbjct: 570 PSGTLVGSVSASDPDLGKNALLRYAVVQ-ANSSFTVDPDTGEIITREPLDRETKGVHELV 628

Query: 115 VYATDTLMTTSAT---VNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAA 171
           + A D    + A    + I+V++VND  P    PQ ++        +  PG+ + +V A 
Sbjct: 629 LEARDQGTPSRAARVPLKITVLDVNDNSPEIVDPQGDVVSVR---EEQPPGTEVARVRAL 685

Query: 172 DGDKGDRVTLSLRGPYEK------MFSIND-SGHI---SIVDLSALNTSTIQLVVVATDT 221
           D D G+  +++     ++      +F+++  +G I   +++D    N    ++ V ATD 
Sbjct: 686 DTDLGENASVTYTILKDRDSDGYNVFTVDPITGMIRTKAVLDHEERN--VYRVSVKATDA 743

Query: 222 GNPPRQA 228
           G PPR +
Sbjct: 744 GRPPRHS 750



 Score = 42.4 bits (98), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 59/244 (24%), Positives = 99/244 (40%), Gaps = 39/244 (15%)

Query: 93   RQGDISLMQCLDYETEDSYRFTVYATDTLMTTSAT-VNISVVNVNDWDPRFRYPQYELFL 151
            + G ++     DYE  + Y FT+ ATDT   T+A  V + + + +++ P+F    Y   +
Sbjct: 2262 KSGTVTTRAVFDYELRNRYAFTLRATDTGGRTAAVRVRVEIESRDEFYPQFTERMYRFGM 2321

Query: 152  PHIPLADLTPGSVIGKVEAADGDKG--DRVTLSL--RGPYEKMFSINDSGHISIVDLSAL 207
                 A +  G+VIG V A D DKG   RV   L  + PY   F +N +    IV    L
Sbjct: 2322 RS--GARIMAGTVIGHVTATDRDKGPDGRVVYQLTSQHPY---FKLNRTTGALIVKQKLL 2376

Query: 208  N-----TSTIQLVVVATDTGNPPRQASVPAIMHFPEAIVQQASSKLNSGTSSTVLIILGV 262
            +       + +LVV A+      RQ S+ + M   E  +   S +   G  ++      +
Sbjct: 2377 HLDMDVEESSRLVVSASSG----RQGSL-SNMTVVEITLTDESDEGRGGGVTSNGGGSNM 2431

Query: 263  VLIVLG-------------------FVIILLILYIHKNKHTKNNGPPGSSHSKNDSFLSN 303
             +   G                   F  + L L++   +H K    PG +   N +  ++
Sbjct: 2432 AVATSGGLADWALGLLIALLLLVVAFGAVFLYLHLRNRRHKKAGAKPGLNGESNATASNS 2491

Query: 304  VILP 307
             + P
Sbjct: 2492 YVDP 2495



 Score = 38.9 bits (89), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 53/193 (27%), Positives = 93/193 (48%), Gaps = 27/193 (13%)

Query: 45   FSKNEYSVSALE-NLPVNYVLLTVTTNKPRDL--RVKYWL-SNDYGERFSIS--RQGDIS 98
            F++ +YS + LE N+  ++V+    ++  + +  RV Y +   +    F+IS    G + 
Sbjct: 1683 FTQTQYSATVLEGNVKGDFVVKLSASDADQGMNGRVLYHIVDGNPDNAFTISPPYSGIVR 1742

Query: 99   LMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIP 155
                LD E  + YR T+ ATD     +T +A +++ V+++ND  P F  P++ +    I 
Sbjct: 1743 TNIVLDREIREKYRLTIIATDQGNPQLTGTAALSVRVIDINDNQPTF--PEHSV----IS 1796

Query: 156  LADLTP-GSVIGKVEAADGDKGDRVTLSLR-----GPYEKMFSINDSGHISIV--DLSAL 207
            +++ T  G+V+  + A D D    +T         GP    FSI+  G   ++   L A 
Sbjct: 1797 VSEGTAVGTVLTTITANDVDSSPALTYRFGNATDPGP----FSIDRYGGKVVLRRRLDAE 1852

Query: 208  NTSTIQLVVVATD 220
              S   L VVA+D
Sbjct: 1853 TRSEYSLQVVASD 1865



 Score = 38.5 bits (88), Expect = 5.7,   Method: Compositional matrix adjust.
 Identities = 45/135 (33%), Positives = 63/135 (46%), Gaps = 10/135 (7%)

Query: 92  SRQGDISLMQCLDYETEDSYRFTVYATDT-LMTTSATVNISVVNVNDWDPRFRYPQYELF 150
           S  GDI +   LD ET       V ATD   ++T A V + V +VND  P F   +Y   
Sbjct: 32  SDTGDICVRTPLDRETAPYLEIPVIATDRGGLSTVAIVRVQVTDVNDNRPIFEPRRYNAT 91

Query: 151 LPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR---GPYEKMFSIN-DSGHISIVDLSA 206
           L     AD T    I +V A D D G    ++ R   G    +F I+ ++G + +   + 
Sbjct: 92  LK----ADNTIQGAILRVVATDLDAGLFGQVAYRITSGNEAGVFQIDRNTGEVEVARPAF 147

Query: 207 LNTSTI-QLVVVATD 220
           L+ S + QL V ATD
Sbjct: 148 LSRSPLHQLNVTATD 162


>gi|328791786|ref|XP_393497.4| PREDICTED: cadherin-related tumor suppressor [Apis mellifera]
          Length = 4958

 Score = 72.0 bits (175), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 58/206 (28%), Positives = 101/206 (49%), Gaps = 15/206 (7%)

Query: 44   QFSKNEYSVSALEN-LPVNYVLLTVTTNKPRDL--RVKYWLSNDYGERFSISRQ-GDISL 99
            +F++ EY  +  EN +   +V     T+K   L  +++Y L  +Y ERF++  + G++  
Sbjct: 2365 EFTRQEYRATVTENSVSRTWVTKPHATDKDEGLNAKIRYSLLGEYSERFTVDPETGEVFT 2424

Query: 100  MQCLDYETEDSYRFTVYATDTLMT----TSATVNISVVNVNDWDPRFRYPQYELFLPHIP 155
            +  LD E    Y  T+ A D+  T    ++  + I V +VND  PRF  P+Y  ++P   
Sbjct: 2425 VVPLDREQTSVYHLTLVAQDSSPTEPQASAVNLTIFVKDVNDNAPRFSSPRYTAYVP--- 2481

Query: 156  LADLTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSIN-DSGHISIVDLSALNTSTI 212
                  G  +   +A D D G+  R+   L+G   + F+I+ +SG I      A + +T 
Sbjct: 2482 -GATKSGDFVFGAKAVDDDDGENSRIVYRLQGIDAEKFAIDSNSGVIRTTQELANDETTY 2540

Query: 213  QLVVVATDTGNPPRQASVPAIMHFPE 238
            QL + A+D G  P+  +   ++H  E
Sbjct: 2541 QLQIQASDCGVKPQSVTADLVIHLWE 2566



 Score = 61.2 bits (147), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 61/214 (28%), Positives = 104/214 (48%), Gaps = 19/214 (8%)

Query: 25  RYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVT-------TNKPRDLRV 77
           +YA   L V+    +    +FS N+  V+  EN P   ++ T+T       TN       
Sbjct: 525 KYASTHLKVTILDENDEAPRFSLNQIQVTLSENTPPQSLVATLTAVDNDQGTNGSVAYSF 584

Query: 78  KYWLSNDYGERFSISR-QGDISLMQCLDYETEDSYRFTVYATDTL---MTTSATVNISVV 133
              ++ DY + F++    G ++    LD ET   YR  V A D      +++ATV +++ 
Sbjct: 585 HSSVARDYPKTFALDGLTGQLTTKVHLDRETIGEYRILVIAKDQGTPPQSSTATVTLTLK 644

Query: 134 NVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMF 191
           +VND  P F   +Y + +P     D  PG+ +GKV A+D D  +  +V  SL    E +F
Sbjct: 645 DVNDNSPVFYPWRYLMAVPE----DAPPGTSVGKVMASDADARENAQVRYSLESGGEGLF 700

Query: 192 SIND-SGHISIV-DLSALNTSTIQLVVVATDTGN 223
            +++ +G I++   L A + +  +L + A DTG+
Sbjct: 701 GVDERTGEITLQGSLRAAHKTLYELNISAKDTGD 734



 Score = 58.2 bits (139), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 55/171 (32%), Positives = 85/171 (49%), Gaps = 20/171 (11%)

Query: 72   PRDLRVKYWLSNDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDTL---MTTSAT 127
            P + +V+Y+L     + F I +  GDI L++ LD E+   Y  T+ A DT    +T S  
Sbjct: 2292 PYNDQVRYFLKEGDTDLFRINASTGDIFLLRPLDRESVAEYTLTLVAMDTGSPPLTGSGI 2351

Query: 128  VNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSV----IGKVEAADGDKG--DRVTL 181
            V I V++VND  P F   +Y         A +T  SV    + K  A D D+G   ++  
Sbjct: 2352 VRIVVLDVNDHIPEFTRQEYR--------ATVTENSVSRTWVTKPHATDKDEGLNAKIRY 2403

Query: 182  SLRGPYEKMFSIN-DSGHI-SIVDLSALNTSTIQLVVVATDTGNPPRQASV 230
            SL G Y + F+++ ++G + ++V L    TS   L +VA D+     QAS 
Sbjct: 2404 SLLGEYSERFTVDPETGEVFTVVPLDREQTSVYHLTLVAQDSSPTEPQASA 2454



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 46/143 (32%), Positives = 68/143 (47%), Gaps = 12/143 (8%)

Query: 95   GDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHI 154
            G ++L + LD ET + Y   V A D L  T   + I V + ND  P F+   Y   +P  
Sbjct: 1788 GQLTLAEALDRETREKYVLKVRADDGLQHTDIALTIQVTDTNDNAPTFQNTAYSFDVPE- 1846

Query: 155  PLADLTPGSVIGKVEAADGDK-GDRVTLS---LRGPYEKMFSINDSGHISIVDLSALNTS 210
               ++  GS IG+V A D D  G    LS   +      +FS+N S  +  +  ++L+  
Sbjct: 1847 ---NMPRGSRIGQVVATDADADGPNSQLSYTLISDWANDVFSLNPSTGVFTL-TASLDYE 1902

Query: 211  TIQ---LVVVATDTGNPPRQASV 230
             +Q   LVV ATD G P   ++V
Sbjct: 1903 QVQHYILVVQATDGGIPALSSTV 1925



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 54/214 (25%), Positives = 103/214 (48%), Gaps = 24/214 (11%)

Query: 29   ATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNK---PRDLRVKYWLSNDY 85
            AT++V+    +    QF++  +SV+  EN  +   ++ +T++     ++  V Y  + + 
Sbjct: 2767 ATVLVTVLDKNDNPPQFTR-LFSVNVTENAEIGTFVIRITSSDLDIGQNANVSYRFTENP 2825

Query: 86   GERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRY 144
            G++F++ +  G++++   LD E +D Y   + A D     +  + I++ + ND  P F  
Sbjct: 2826 GQKFAMDALSGNVTVNGHLDREEQDEYLLKLVAADGAWQAATALTITIQDQNDNPPEFDE 2885

Query: 145  PQYELFLPHIPLADLTPG-SVIGKVEAADGDK---GDRVTLSLRGPYEKMFSINDS-GHI 199
              Y    P     +L P  + +G+V A D DK      ++ SL  P + +F+++ + G +
Sbjct: 2886 ESYHFHFP-----ELQPSVAHVGQVTAIDRDKQGPNSVISYSLLQPSD-LFTVDPATGDV 2939

Query: 200  -SIVDLSALNT-------STIQLVVVATDTGNPP 225
             S   L   +T       +   L VVATD G PP
Sbjct: 2940 FSKKTLKYKHTHRPSSPENLYSLTVVATDNGKPP 2973



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 47/152 (30%), Positives = 68/152 (44%), Gaps = 10/152 (6%)

Query: 85  YGER---FSISRQ-GDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDP 140
           YG++   F I    G I+   CLD E    Y   + A   L     +VNI+VV+VND  P
Sbjct: 803 YGDQKGNFKIDESTGTITTSGCLDREQVAYYSLQLSARAGLAYGQTSVNITVVDVNDNPP 862

Query: 141 RFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDSGH 198
           RF  P+ E+        +   G  +    A D D     R+  SL     + F + ++  
Sbjct: 863 RF--PKGEIGDEVFLRENAAVGQEVCLARARDRDASVNARIVYSLTHNPGEQFRVAENSG 920

Query: 199 ISIVD--LSALNTSTIQLVVVATDTGNPPRQA 228
           I  +D  + A   + + L V ATD+GNPP  A
Sbjct: 921 IIYLDKPIRAAPGTVLHLEVTATDSGNPPLSA 952



 Score = 48.5 bits (114), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 55/234 (23%), Positives = 104/234 (44%), Gaps = 20/234 (8%)

Query: 13  LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVT-TNK 71
           L V A       R A A L++     +  E  F ++EYS    E  P+   + +++ T+ 
Sbjct: 408 LTVVATDKGTPPRSATAYLVIHVNDVNDHEPVFQQSEYSAVLSELSPIGSFVASISATDA 467

Query: 72  PRDLRVKYWLSNDYGER---FSISRQ-GDISLMQCLDYETEDSYRFTVYATD---TLMTT 124
              L  + +   D G     F+I +  G ++ +  LD E + S    V A D   +    
Sbjct: 468 DSGLNARIYYELDSGNEQGWFAIDQDTGLVTTVATLDREVQGSIELHVSARDGGPSPKYA 527

Query: 125 SATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTL--- 181
           S  + +++++ ND  PRF   Q ++ L      +  P S++  + A D D+G   ++   
Sbjct: 528 STHLKVTILDENDEAPRFSLNQIQVTLSE----NTPPQSLVATLTAVDNDQGTNGSVAYS 583

Query: 182 ---SLRGPYEKMFSIND-SGHISI-VDLSALNTSTIQLVVVATDTGNPPRQASV 230
              S+   Y K F+++  +G ++  V L        +++V+A D G PP+ ++ 
Sbjct: 584 FHSSVARDYPKTFALDGLTGQLTTKVHLDRETIGEYRILVIAKDQGTPPQSSTA 637



 Score = 46.6 bits (109), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 43/109 (39%), Positives = 54/109 (49%), Gaps = 11/109 (10%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTV-TTNKPRDLRVKYWLS----NDYGERFSISRQ-GDI 97
            QF +  Y V   E   +   LL V TT+    L    + S    N YG RF+I    G I
Sbjct: 1182 QFQRLPYRVQVNEGAAIGTQLLRVYTTDADEGLNGDVFYSLEDGNQYG-RFAIDEATGQI 1240

Query: 98   SLMQCLDYETEDSYRFTVYATD----TLMTTSATVNISVVNVNDWDPRF 142
            SL + LD ET DSY  TV A D    T +++S TV I V++ ND  P F
Sbjct: 1241 SLTKELDRETMDSYVLTVVAHDAGLETRLSSSTTVYIEVLDENDNVPLF 1289



 Score = 44.7 bits (104), Expect = 0.088,   Method: Compositional matrix adjust.
 Identities = 49/187 (26%), Positives = 80/187 (42%), Gaps = 29/187 (15%)

Query: 76   RVKYWLSNDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNIS 131
            +V Y+L ND+ E F I S  G+IS    LD E   SY   + A D     +T +ATV ++
Sbjct: 2713 QVSYYLVNDFTETFVIDSDNGEISTNAKLDREEIASYELIIEARDEGQPSLTGTATVLVT 2772

Query: 132  VVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR---GPYE 188
            V++ ND  P+F      LF  ++   +   G+ + ++ ++D D G    +S R    P +
Sbjct: 2773 VLDKNDNPPQFT----RLFSVNV-TENAEIGTFVIRITSSDLDIGQNANVSYRFTENPGQ 2827

Query: 189  KMF------SINDSGHIS-----------IVDLSALNTSTIQLVVVATDTGNPPRQASVP 231
            K        ++  +GH+            +    A   +T   + +     NPP      
Sbjct: 2828 KFAMDALSGNVTVNGHLDREEQDEYLLKLVAADGAWQAATALTITIQDQNDNPPEFDEES 2887

Query: 232  AIMHFPE 238
               HFPE
Sbjct: 2888 YHFHFPE 2894



 Score = 43.9 bits (102), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 45/136 (33%), Positives = 67/136 (49%), Gaps = 14/136 (10%)

Query: 103 LDYETEDSYRFTVYATDTLM---TTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADL 159
           LD E    Y  TV ATD      + +A + I V +VND +P F+  +Y        L++L
Sbjct: 398 LDREEIPKYNLTVVATDKGTPPRSATAYLVIHVNDVNDHEPVFQQSEYSAV-----LSEL 452

Query: 160 TP-GSVIGKVEAADGDKG--DRVTLSL-RGPYEKMFSIN-DSGHISIV-DLSALNTSTIQ 213
           +P GS +  + A D D G   R+   L  G  +  F+I+ D+G ++ V  L      +I+
Sbjct: 453 SPIGSFVASISATDADSGLNARIYYELDSGNEQGWFAIDQDTGLVTTVATLDREVQGSIE 512

Query: 214 LVVVATDTGNPPRQAS 229
           L V A D G  P+ AS
Sbjct: 513 LHVSARDGGPSPKYAS 528



 Score = 42.7 bits (99), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 53/202 (26%), Positives = 86/202 (42%), Gaps = 32/202 (15%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSN-DYGERFSISRQGDISLM 100
            F    ++V  +EN  +   +L+VT    +   + RV Y ++  D    F ++  G +   
Sbjct: 1941 FEAGPHAVDIVENTTIGTPILSVTAQDLDSGDNGRVIYAVAGGDENGDFGVAPNGTLFTR 2000

Query: 101  QCLDYETEDSYRFTVYATDTL----MTTSATVNISVV--NVNDWDPRFRYPQYELFLPHI 154
            + LD E +  Y   + ATD+     +  S+TV ++VV  +VND  P F  P     + + 
Sbjct: 2001 KLLDREQKPLYNLVLSATDSPSPPGLPLSSTVQVTVVLLDVNDMSPEFISPTKISIIENA 2060

Query: 155  PLADLTPGSVIGKVEAADGDKGDR--VTLSLR--------GPYEKMFSINDSGHISIVDL 204
            P       +V+  ++A D D+G    V  SL         GP + +  ++ S       L
Sbjct: 2061 P-----SNTVVMAIKAVDRDEGRNGYVEYSLEDTTLPFTVGPVDGLLRVSGS-------L 2108

Query: 205  SALNTSTIQLVVVATDTGNPPR 226
                 S   L V A D G PPR
Sbjct: 2109 DRELRSNYTLEVTAKDRGEPPR 2130



 Score = 40.8 bits (94), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 35/115 (30%), Positives = 55/115 (47%), Gaps = 11/115 (9%)

Query: 13   LVVRAIQYD---NQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTT 69
            L VRAI       +D  +L TL++S  G +     F+   + V   EN PVN  +LTV+ 
Sbjct: 3071 LKVRAIDKGVPPQKDEVSL-TLVIS--GENKHAPTFAAVSHQVRVPENEPVNTTILTVSA 3127

Query: 70   NKPRD-----LRVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATD 119
                +     +R K    N+  E F  S  G +++++ LDY+    Y+  + ATD
Sbjct: 3128 TDGDEGPNGMIRYKISAGNEKNEFFVHSITGAVTILEPLDYDLVQEYKLNITATD 3182



 Score = 39.7 bits (91), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 43/150 (28%), Positives = 63/150 (42%), Gaps = 13/150 (8%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDL----RVKYWLSNDYGE-RFSISRQGDISL 99
            F    Y  S  E+ PVN    ++T     DL    RV Y +++   E RF I   G + +
Sbjct: 970  FKLTSYETSLPESTPVNDRFFSLTATD-SDLGANGRVLYSVTDGNTENRFGIFPDGQLYV 1028

Query: 100  MQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
               LD E +D Y   V ATD      ++   V + +++ ND  P F    + L L     
Sbjct: 1029 KNVLDREEQDYYALEVTATDQGSPSRSSVVPVVVHIIDENDNAPEFTNSSFVLHL----R 1084

Query: 157  ADLTPGSVIGKVEAADGDKGDRVTLSLRGP 186
             +  P + +GK+ A D D G    L    P
Sbjct: 1085 ENEPPDTFVGKLLATDRDVGRNADLVFSLP 1114



 Score = 38.9 bits (89), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 54/229 (23%), Positives = 94/229 (41%), Gaps = 49/229 (21%)

Query: 45  FSKNEYSVSALENLPVNYVLLTV-TTNKPRD--LRVKYWLSNDYGERFSI---------- 91
           F +++Y V+  E+ P+   +LTV  T+K  +   ++ Y+L  D   +F+I          
Sbjct: 212 FQQSDYVVALNESAPIGTKVLTVRATDKDSEDNSKLTYYLP-DTETQFTIDPDTGTVTTI 270

Query: 92  -------------SRQGDISLMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNV 135
                        +R GD  L  C+          TV+A D           V +++++ 
Sbjct: 271 EPLDCPQQSCTGAARLGDGCLKSCV---------ITVFARDHGSPRQDGRTYVTVNLLDA 321

Query: 136 NDWDPRFRYPQYELFLPHIPLAD--LTPGSVIGKVEAADGDKGD--RVTLSLRGPYE-KM 190
           ND DP  ++  Y    P     D      S++  +   D D+G     ++ +R   E   
Sbjct: 322 NDHDPEIKF-SYFPITPGYATVDENAVKDSIVAAITVIDNDEGSNGETSVEIRAGNELGH 380

Query: 191 FSINDSGHISIVDLSA-LNTSTI---QLVVVATDTGNPPRQASVPAIMH 235
           F +  +    +V ++  L+   I    L VVATD G PPR A+   ++H
Sbjct: 381 FRLQTAATFDVVRVNGGLDREEIPKYNLTVVATDKGTPPRSATAYLVIH 429


>gi|321479216|gb|EFX90172.1| hypothetical protein DAPPUDRAFT_6 [Daphnia pulex]
          Length = 3261

 Score = 72.0 bits (175), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 85/303 (28%), Positives = 137/303 (45%), Gaps = 46/303 (15%)

Query: 13   LVVRAIQ-YDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNK 71
             +VRA   +  Q   A+AT+ V     +     F    Y     EN P   V+ T   N 
Sbjct: 2606 FIVRASDGHSTQPLSAIATIAVKVEDENDNGPAFPVGSYLEFVAENAPAGTVVFTAHAN- 2664

Query: 72   PRDL------RVKYWLSNDYG-ERFSIS-RQGDISLMQCLDYETEDSYRFTVYATDTL-M 122
              D+      ++KY ++   G + F+I    G I      DYE ++ Y  ++ A+D    
Sbjct: 2665 --DMDRGPYGKLKYSIAGGEGKDHFNIDPTTGTIVTQSVFDYEAKNRYYLSIQASDVGGQ 2722

Query: 123  TTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG--DRVT 180
            T S  V I V + +++ P F    Y   +P    +D   G  IGKV A D DKG   RV 
Sbjct: 2723 TASVNVQIDVESRDEFAPEFTESSYRFSVP----SDADVGYAIGKVLATDRDKGTDGRVV 2778

Query: 181  LSLRG--PYEKMFSINDSGHISI---------VDLSALNTSTIQLVVVATDTGNPPRQAS 229
              LR   P+ K+  +N  G IS+         +  SAL  ++I LVVVA+ +G P   ++
Sbjct: 2779 YHLRNQHPHFKINKMN--GVISVRKRLDDRGPIGPSALTGNSISLVVVAS-SGRPGSLSN 2835

Query: 230  VPAIMHFPEAIVQQAS--SKLNSGTSS-------TVLIILGVVLIVLGFVIILLILYIHK 280
            +  +    E +V+ A+  ++L S   S        + +++ ++ +VLGFV  L+ L++  
Sbjct: 2836 MSVV----EIVVEGAANGTRLASADQSVGGLADWAMGLLIALIFLVLGFVAALVFLHMRH 2891

Query: 281  NKH 283
             K 
Sbjct: 2892 RKQ 2894



 Score = 71.2 bits (173), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 82/288 (28%), Positives = 119/288 (41%), Gaps = 48/288 (16%)

Query: 6    DFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLR-------ELQ--------FSKNEY 50
            D  Q   ++ R + ++   +YAL      K    LR       E+Q        F KNEY
Sbjct: 894  DPRQGFIMLTRKLDFETTQKYALVIGAQDKGSPPLRSNLTLNIEVQDVNDNPPTFEKNEY 953

Query: 51   SVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSND-YGERFSI-SRQGDISLMQCLDY 105
             V+  E+L VN   L V     +   + R+ Y +  +   + F I    G + L + LD 
Sbjct: 954  QVNVAESLAVNSQFLQVNAIDLDTGNNARLTYRVKEEALADVFGIFPNSGSLYLKKSLDR 1013

Query: 106  ETEDSYRFTVYATDTLM---TTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPG 162
            E  D Y  TV ATD  +   + +ATVN+ V + ND DP F    Y+  +      +L  G
Sbjct: 1014 EMRDRYTLTVVATDNGLPPGSAAATVNVFVNDANDNDPVFTRDVYQFTIEE----NLEKG 1069

Query: 163  SVIGKVEAADGDKGDRVTLSLR-GPYEKMFSIND-SGHI---SIVDLSALNTSTIQLVVV 217
            +++G V A D D      L     P    F +N  +G I     +D  A     +Q+ V 
Sbjct: 1070 ALVGVVSATDKDLDANAALRYSLLPVNGSFQLNSLTGEIFTKGPLDREAKAVHELQIEV- 1128

Query: 218  ATDTGNPPRQA-------------SVPAIMHFPEAIVQQASSKLNSGT 252
              D GNPPR A             + P I+  PE  V     +L +GT
Sbjct: 1129 -KDQGNPPRSAKAIVRVMVTDVNDNTPVIVE-PEETVLSVREELPAGT 1174



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 58/185 (31%), Positives = 83/185 (44%), Gaps = 19/185 (10%)

Query: 52   VSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGE------RFSISR-QGDISLMQCLD 104
            VS  E   V  V+ T+T N   D+     L+ D+ +       FSI R  G I+L Q LD
Sbjct: 2228 VSVSEGSEVGTVITTITAN---DVDTNPTLTYDFADGGNPDRMFSIDRFSGKITLAQPLD 2284

Query: 105  YETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSV 164
            +E +  Y   V A+D    T  ++ ++V++ ND  P F    Y   LP +      PG  
Sbjct: 2285 HERQQQYTLRVQASDMAHITETSITVNVLDENDNAPVFSVQNYRASLPEL----TEPGYA 2340

Query: 165  IGKVEAADGDKGD--RVTLSLR-GPYEKMFSINDSGHISIVDLSALN--TSTIQLVVVAT 219
            +  + A D DKG+  RV  SL   P +  +   ++G I        N     +QLVV A 
Sbjct: 2341 VLSINATDADKGENARVRYSLAISPTDAFYISEETGVIYTNQTLTFNPRQPVLQLVVKAQ 2400

Query: 220  DTGNP 224
            D G P
Sbjct: 2401 DRGRP 2405



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 61/218 (27%), Positives = 102/218 (46%), Gaps = 27/218 (12%)

Query: 25   RYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVT---TNKPRDLRVKYWL 81
            R     + VS    +  + +F++N Y+ +  EN+  + +++TV     ++  + ++ Y L
Sbjct: 1772 RQGFCNITVSVDDENDSDPRFTQNRYTATLAENVQPDTIVMTVQATDADRGHNAKITYSL 1831

Query: 82   SNDYGERFSISRQ-GDISLMQCLDYETEDSYRFTVYATD----TLMTTSATVNISVVNVN 136
            SN+    F I  + G ++     D E   SY F V ATD       +  A ++I++ +VN
Sbjct: 1832 SNETQWLFKIDNETGVLTTTGHFDRERRGSYTFEVRATDGGRYDARSEKAQIHITITDVN 1891

Query: 137  DWDPRF-RYPQYELFLPHIPLADLTPGSVIGKVEAADGDK--GDRVTLSL-RGPYEKMFS 192
            D  P F +YP    F   +P A   P   + ++ A D D+  G  V  SL   P    F 
Sbjct: 1892 DNKPVFVKYP----FAADVP-AFTQPNQQLLQIVAEDKDEGPGGEVVYSLINQPSNSKFR 1946

Query: 193  INDSGHISIVDLSALNTSTIQ------LVVVATDTGNP 224
            I    H S   ++A N+ T++      L V+ATD G+P
Sbjct: 1947 I----HPSTGVVTATNSLTMESGRLFHLEVLATDKGSP 1980



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 41/131 (31%), Positives = 66/131 (50%), Gaps = 9/131 (6%)

Query: 29  ATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGER 88
           AT+ V+    +  E  F ++ Y+VS  E+  V + +L V+   P D  V   ++   G+ 
Sbjct: 518 ATVRVTIRDVNDNEPIFDQSFYNVSVREDEAVGHCVLKVSATDP-DCGVNAIVNYTMGDG 576

Query: 89  FSISRQ-------GDISLMQCLDYETEDSYRFTVYATDTL-MTTSATVNISVVNVNDWDP 140
           F   R+       G+I +   LD+E  + Y F + ATD   ++T+A V I VV+VND  P
Sbjct: 577 FGKYREFEVNPSSGEICISAALDHEKRNIYEFPILATDRGGLSTTAMVKIQVVDVNDNRP 636

Query: 141 RFRYPQYELFL 151
            F   +Y + L
Sbjct: 637 TFYPREYNVSL 647



 Score = 51.6 bits (122), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 65/240 (27%), Positives = 108/240 (45%), Gaps = 28/240 (11%)

Query: 12  TLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTV---T 68
           +LV+ A+   N       T+ ++    +  +  F+++ Y  S  EN  +   +L V    
Sbjct: 177 SLVIEALDGGNPPLRGFMTVNITIQDVNDNQPIFNQSRYFASVAENATIGTSVLQVFATD 236

Query: 69  TNKPRDLRVKYWLSNDYGERFSI----SRQGDISLMQCLDYETEDSYRFTVYATDT---L 121
           T+   + R+ Y ++    +R S+       G IS+ + LD+ET++ +   V A+D+    
Sbjct: 237 TDAGDNGRITYSINRRQSDRDSVFVIDPLTGVISVNRPLDFETKEVHELVVVASDSGVQA 296

Query: 122 MTTSATVNISVVNVNDWDPRFRYPQYELFL-----PHIPLADLTPGSVIGKVEAADGDKG 176
           + T+A V+I V +VND  P        +FL     P I   D  PG  + ++   D D  
Sbjct: 297 LETTAFVSIRVTDVNDNQPTINL----IFLSDDATPKIS-EDAQPGEFVARISVNDPDSK 351

Query: 177 DR---VTLSLRGPYEKMFSINDSGHI--SIVDLSALN--TSTIQLVVVATDTGNPPRQAS 229
           +    V ++L G  E  F +    +I   IV L         + LVV ATD G+PP  AS
Sbjct: 352 EEYANVNVTLDGG-EGHFGLTTRDNIIYMIVSLPLDREVKPNMTLVVTATDQGSPPLHAS 410



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 51/155 (32%), Positives = 76/155 (49%), Gaps = 17/155 (10%)

Query: 52   VSALENLPVNYVLLTVTT--NKPRD-LRVKYWL-SNDYGERFSIS-RQGDISLMQCLDYE 106
            V  +E+ PV Y LL V       RD  RV Y + S +    FS+    G +++ + LD E
Sbjct: 1485 VDIMEDEPVGYPLLHVIAVDRDARDNGRVSYSIVSGNEDGAFSLDVASGVLAVTRPLDRE 1544

Query: 107  TEDSYRFTVYATDTLMTTSAT---VNISVVNVNDWDPRFRYPQYELFLPHIPLADLTP-G 162
            +++ Y   V ATD      A+   V+I V ++ND  PRF  P YE       +A+ +P G
Sbjct: 1545 SQNRYALNVTATDHGRPARASWQLVHIHVEDINDNPPRFVRPLYEA-----AVAENSPAG 1599

Query: 163  SVIGKVEAADGDKGDRVTLSL---RGPYEKMFSIN 194
            + + KV A D D G    L+     G  + MFS++
Sbjct: 1600 TFVVKVSATDKDVGTNGNLTYAIPEGIADGMFSVD 1634



 Score = 45.4 bits (106), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 55/205 (26%), Positives = 92/205 (44%), Gaps = 18/205 (8%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGERFSISRQ-GDISLM 100
            FS   Y  S  E     Y +L++     +K  + RV+Y L+    + F IS + G I   
Sbjct: 2322 FSVQNYRASLPELTEPGYAVLSINATDADKGENARVRYSLAISPTDAFYISEETGVIYTN 2381

Query: 101  QCLDYETEDS-YRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
            Q L +       +  V A D     +++   V I + +VN+  P+F     +++  HI  
Sbjct: 2382 QTLTFNPRQPVLQLVVKAQDRGRPSLSSVVAVRIQIADVNNNAPKF---SQDVYTAHIS- 2437

Query: 157  ADLTPGSVIGKVEAADGDK---GDRVTLSLR-GPYEKMFSI-NDSGHISIVD-LSALNTS 210
             D T G+++  V AAD D+      +  S+  G     F I +D+G I +V  +     S
Sbjct: 2438 EDATRGTIVLHVSAADSDETRDNHNIDYSIENGNINSTFQITSDTGEILLVKTVDREEIS 2497

Query: 211  TIQLVVVATDTGNPPRQASVPAIMH 235
               L V+A D G+P R ++   ++H
Sbjct: 2498 VFNLKVLAMDRGSPARNSTADVVIH 2522



 Score = 42.7 bits (99), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 48/156 (30%), Positives = 68/156 (43%), Gaps = 24/156 (15%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVT-TNKPRD--LRVKYWLS--NDYGERFSISRQGDISL 99
            F++  Y V   E   +   LL V  T++  D   R+ Y ++  ND G        G ISL
Sbjct: 2533 FNQTLYEVKVSEAQAIGTALLRVAATDRDHDENARLSYDITSGNDKGCFEVDPSTGVISL 2592

Query: 100  MQCLDYETEDSYRFTVYATDTLMTTS----ATVNISVVNVNDWDPRFRYPQYELFLPHIP 155
             + LD+E    +RF V A+D   T      AT+ + V + ND  P F    Y  F     
Sbjct: 2593 KKPLDFEMSGEHRFIVRASDGHSTQPLSAIATIAVKVEDENDNGPAFPVGSYLEF----- 2647

Query: 156  LADLTP-GSVIGKVEAADGDKGDRVTLSLRGPYEKM 190
            +A+  P G+V+    A D D         RGPY K+
Sbjct: 2648 VAENAPAGTVVFTAHANDMD---------RGPYGKL 2674



 Score = 38.9 bits (89), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 37/111 (33%), Positives = 54/111 (48%), Gaps = 19/111 (17%)

Query: 102  CLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLAD 158
             LD E  D YR T+ ATD     +T + T+ I++V+VND  P         F PH  +  
Sbjct: 2179 VLDREIRDFYRLTIIATDEGSPQLTGTCTLRINIVDVNDNQP--------TFPPH-SVVS 2229

Query: 159  LTPGSVIGKV----EAADGDKGDRVTLSLR--GPYEKMFSIND-SGHISIV 202
            ++ GS +G V     A D D    +T      G  ++MFSI+  SG I++ 
Sbjct: 2230 VSEGSEVGTVITTITANDVDTNPTLTYDFADGGNPDRMFSIDRFSGKITLA 2280


>gi|195159445|ref|XP_002020589.1| GL15349 [Drosophila persimilis]
 gi|194117539|gb|EDW39582.1| GL15349 [Drosophila persimilis]
          Length = 1812

 Score = 72.0 bits (175), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 67/217 (30%), Positives = 95/217 (43%), Gaps = 30/217 (13%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWL----------------SNDY 85
            F ++EY+V+  E+ PVN  ++ V     +   + R+ Y +                S+D 
Sbjct: 1023 FERDEYAVNVSESRPVNSQIVQVNATDLDTGNNARITYRIVDAGADNATAPAAAGGSSDV 1082

Query: 86   GERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPR 141
               F I    G I L   LD ET D Y+  + ATD           V + V++ ND DPR
Sbjct: 1083 ALHFGIFPNSGWIYLRAPLDRETRDRYQLVILATDNGTPAAHARTRVLVRVLDANDNDPR 1142

Query: 142  FRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSIND-SGHI 199
            F  PQYE  +      +L  GSV+G V A D D G+   +     P    F ++  +G I
Sbjct: 1143 FLRPQYEFRIEE----NLRRGSVVGAVAARDLDLGENAAIRYSLLPANSSFQVHPVTGEI 1198

Query: 200  SIVD-LSALNTSTIQLVVVATDTGNPPRQASVPAIMH 235
            S  + L     +   LVV A D G P R A VP  +H
Sbjct: 1199 STREPLDRELRALYDLVVEARDQGTPVRSARVPVRVH 1235



 Score = 65.1 bits (157), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 66/210 (31%), Positives = 97/210 (46%), Gaps = 17/210 (8%)

Query: 29  ATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGER 88
           AT++V+    +  E  F ++ Y+VS  EN PV   +L V+ + P D  V   ++   GE 
Sbjct: 584 ATVLVTIHDVNDNEPIFDQSFYNVSVAENEPVGRCILKVSASDP-DCGVNAMVNYTLGEG 642

Query: 89  FS-------ISRQGDISLMQCLDYETEDSYRFTVYATDT-LMTTSATVNISVVNVNDWDP 140
           F         S  G+I +   LD+E   SY F V ATD   ++T+A + + + +VND  P
Sbjct: 643 FKHLTEFEVRSASGEICIAGELDFERRSSYEFPVLATDRGGLSTTAMIKMQLTDVNDNRP 702

Query: 141 RFRYPQYELFLPHIPLADLTPGSV-IGKVEAADGDKGDRVTLSLR---GPYEKMFSIN-D 195
            F   +Y + L   P A     S+ +  V A D D G    +S R   G    +F I+  
Sbjct: 703 VFYPREYNVSLKESPPAQTPAASIPVVAVVATDPDSGSFGQVSYRIVAGNEAGIFRIDRS 762

Query: 196 SGHISIV---DLSALNTSTIQLVVVATDTG 222
           SG I +     LS     T  L + ATD G
Sbjct: 763 SGEIFVTRPDSLSVRTQPTHMLNISATDGG 792



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 63/208 (30%), Positives = 98/208 (47%), Gaps = 29/208 (13%)

Query: 45  FSKNEYSVSALENLPVNYVLLTV---TTNKPRDLRVKYWLS---NDYGERFSISRQ-GDI 97
           F+++ Y  +  EN  V   +L V    T+   +  V+Y ++   +D  + F I  Q G I
Sbjct: 275 FNQSRYFATVPENATVGTSVLQVYASDTDAEENGLVEYAINRRQSDKEQMFRIDPQTGAI 334

Query: 98  SLMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFL--- 151
            + + LD+ET++ +   V A D     + T+A V+I V +VND  P        +FL   
Sbjct: 335 FINKALDFETKELHELVVVAKDHGEQPLETTAFVSIRVTDVNDNQPTINV----IFLSDD 390

Query: 152 --PHIPLADLTPGSVIGKVEAADGDKGDR---VTLSLRGPYEKMFSI---NDSGHISIVD 203
             P I  +   PG  + ++   D D       V +SL G  E  F++   + S ++ IV+
Sbjct: 391 ASPKISES-AQPGEFVARISVHDPDSKTEYANVNVSLNGG-EGHFALTTRDSSIYLVIVN 448

Query: 204 L--SALNTSTIQLVVVATDTGNPPRQAS 229
           L     +TS   L VVATD G PP  AS
Sbjct: 449 LPLDRESTSNYTLSVVATDKGTPPLHAS 476



 Score = 44.3 bits (103), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 58/192 (30%), Positives = 87/192 (45%), Gaps = 16/192 (8%)

Query: 45   FSKNEYSVSALENLPVNYVLLTV---TTNKPRDLRVKYWL-SNDYGERFSI-SRQGDISL 99
            F K  Y+    E++P   V+ +V   + +      V+Y + S D    F I    G+I +
Sbjct: 816  FEKARYNYYVKEDIPQGTVVGSVIATSGDTAHRSPVRYSIYSGDPDGYFGIEGGSGNIRI 875

Query: 100  MQCLDYETEDSYRFTVYAT--DTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLA 157
             + LD+E +      + AT  +  +     VNI V +VND  P F      + +P    A
Sbjct: 876  ARPLDHEAKGQVLLNIQATAGEPPVYGHTQVNIEVEDVNDNAPEFEASLVRISVPEN--A 933

Query: 158  DLTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSIN-DSGHISIVDLSALNTSTIQ- 213
            DL  G+ +    A D D G   +VT SL     ++F+I+  SGH+ +       TS    
Sbjct: 934  DL--GAPLYAAHAHDKDSGSSGQVTYSL-ARERQLFAIDPRSGHLVLSQHLDYETSQRHT 990

Query: 214  LVVVATDTGNPP 225
            LVV ATD G PP
Sbjct: 991  LVVTATDGGVPP 1002



 Score = 40.8 bits (94), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 45/156 (28%), Positives = 65/156 (41%), Gaps = 22/156 (14%)

Query: 95   GDISLMQCLDYETEDSYRFTVYATDT------LMTTSATVNISVVNVNDWDPRFRYPQYE 148
            G +SL   LD+E    Y   V A D        + TS TV + V++ ND  P F  P  +
Sbjct: 1544 GSLSLQAPLDFEAVQEYTLIVQALDQSSNASERLQTSVTVRLRVLDANDNAPEFVSPLAK 1603

Query: 149  LFLPHIPLADLTP-GSVIGKVEAADGDKGDRVTLSLR---GPYEKMFSINDSGHISIVDL 204
                 + L+D T  G  +  V A D D GD   L+     G  E  F I  S    +++L
Sbjct: 1604 GGSASVFLSDATRIGETVAHVVALDRDAGDNGRLAYDIEGGNGEGRFRI--SAATGVIEL 1661

Query: 205  ---------SALNTSTIQLVVVATDTGNP-PRQASV 230
                      A       L++ A D G P PR++++
Sbjct: 1662 VKSLPPASEDADKNGRFTLLISAVDHGLPEPRKSTL 1697



 Score = 40.4 bits (93), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 39/144 (27%), Positives = 65/144 (45%), Gaps = 14/144 (9%)

Query: 95   GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFL 151
            G+IS  + LD E    Y   V A D    + +    V + V +VND  P    PQ ++  
Sbjct: 1196 GEISTREPLDRELRALYDLVVEARDQGTPVRSARVPVRVHVSDVNDNAPEIADPQEDVVS 1255

Query: 152  PHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRG---PYEKMFSINDSGHI--SIVD 203
                  +  PG+ + ++ A D D G   +++   ++G       +FSI+ +  +  + V 
Sbjct: 1256 VR---EEQPPGTEVVRIRATDRDHGQNASITYSIVKGRDSDGHGLFSIDPATGVIRTRVL 1312

Query: 204  LSALNTSTIQLVVVATDTGNPPRQ 227
            L     S  +L V ATD G PP++
Sbjct: 1313 LDHEERSIYRLGVAATDGGQPPKE 1336



 Score = 40.0 bits (92), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 52/178 (29%), Positives = 76/178 (42%), Gaps = 31/178 (17%)

Query: 76   RVKYWLSNDYGERFSIS-RQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNIS 131
            +V Y L+ +  + F+I  R G + L Q LDYET   +   V ATD     + T+ T+ + 
Sbjct: 954  QVTYSLARER-QLFAIDPRSGHLVLSQHLDYETSQRHTLVVTATDGGVPPLATNLTILVD 1012

Query: 132  VVNVNDWDPRFRYPQYELFLPHIPLADLTP-GSVIGKVEAADGDKGDRVTLSLR----GP 186
            V +VND  P F   +Y      + +++  P  S I +V A D D G+   ++ R    G 
Sbjct: 1013 VQDVNDNPPVFERDEYA-----VNVSESRPVNSQIVQVNATDLDTGNNARITYRIVDAGA 1067

Query: 187  YEKMFSINDSG------HISIVDLSA-------LNTST---IQLVVVATDTGNPPRQA 228
                      G      H  I   S        L+  T    QLV++ATD G P   A
Sbjct: 1068 DNATAPAAAGGSSDVALHFGIFPNSGWIYLRAPLDRETRDRYQLVILATDNGTPAAHA 1125


>gi|355687592|gb|EHH26176.1| hypothetical protein EGK_16078 [Macaca mulatta]
          Length = 4981

 Score = 72.0 bits (175), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 79/270 (29%), Positives = 121/270 (44%), Gaps = 44/270 (16%)

Query: 2    INEDD-----FLQPITLV---VRAIQYDNQDRYALATLIVSKAGTSLRELQ--------- 44
            +NEDD     FL PIT V    R + Y+ Q  Y L T+     G     ++         
Sbjct: 1880 VNEDDEDGIFFLNPITGVFNLTRVLDYEVQQYYIL-TVRAEDGGGQFTAIRVYFNILDVN 1938

Query: 45   -----FSKNEYSVSALENLPVNYVLLTVTTNKPR---DLRVKYWL-SNDYGERFSISRQG 95
                 FS N YS S +ENLPV   +L           +  + Y + S D   +F++ + G
Sbjct: 1939 DNPPIFSLNSYSTSLMENLPVGSTVLVFNVTDAXSGINSELAYSIASGDSLGQFTVDKNG 1998

Query: 96   DISLMQCLDYETEDSYRFTVYATD------TLMTTSATVNISVVNVNDWDPRFRYPQYEL 149
             + +++ LD E++  Y   V   D      +  T++A V+I +++VND  P F  P+   
Sbjct: 1999 LLKVLKALDRESQSFYNLVVQVHDLPQIPASRFTSTAQVSIILLDVNDNPPTFLSPK--- 2055

Query: 150  FLPHIPLADLTP-GSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIND-SGHISIV-DL 204
             L +IP  + TP  +V+ K +A+D D G    +  +L  P    FSI    G + +  +L
Sbjct: 2056 -LTYIP--ENTPIDTVVFKAQASDPDSGPNSYIEYTLLNPLGNKFSIGTIDGEVRLTGEL 2112

Query: 205  SALNTSTIQLVVVATDTGNPPRQASVPAIM 234
                 S   L VVATD G P   +S   I+
Sbjct: 2113 DREEVSNYTLTVVATDKGQPSLSSSTEVIV 2142



 Score = 58.5 bits (140), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 61/192 (31%), Positives = 92/192 (47%), Gaps = 24/192 (12%)

Query: 50   YSVSALENLPVNYVLLTVTTNKPRDLRV----KYWLSNDYGERFSIS-RQGDISLMQCLD 104
            +S    EN P+ Y +  VTT+   D+ +    +Y +  D    F+I+   GDI + + L+
Sbjct: 2777 FSAHVPENSPLGYTVTRVTTSD-EDIGINAISRYSIM-DTSLPFTINPSTGDIVISRPLN 2834

Query: 105  YETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSV 164
             E  D YR  V A D+  T S  V I V +VND  PRF  P Y L  P   L ++  GS 
Sbjct: 2835 REDTDRYRIRVSAHDSGWTVSTDVTIFVTDVNDNAPRFSRPSYYLDCPE--LTEI--GSK 2890

Query: 165  IGKVEAADGDKGD--RVTLSLRGPYEKMFSIN-DSGHI---------SIVDLSALNTSTI 212
            + +V A D D+G   +V   ++   E  F IN  +G I         ++   S +N +  
Sbjct: 2891 VTQVFATDPDEGSNGQVFYFIKSQSE-YFRINATTGEIFNKQILKYQNVTGFSNVNINRH 2949

Query: 213  QLVVVATDTGNP 224
              +V ++D GNP
Sbjct: 2950 SFIVTSSDRGNP 2961



 Score = 58.2 bits (139), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 56/183 (30%), Positives = 89/183 (48%), Gaps = 16/183 (8%)

Query: 56   ENLPVNYVLLTVTTNKPR---DLRVKYWLSNDYGERFSISR-QGDISLMQCLDYETEDSY 111
            EN P++ V+     + P    +  ++Y L N  G +FSI    G++ L   LD E   +Y
Sbjct: 2061 ENTPIDTVVFKAQASDPDSGPNSYIEYTLLNPLGNKFSIGTIDGEVRLTGELDREEVSNY 2120

Query: 112  RFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKV 168
              TV ATD     +++S  V + V+++ND +P F    Y++ +    L     G+ I +V
Sbjct: 2121 TLTVVATDKGQPSLSSSTEVIVMVLDINDNNPIFAQALYKVEINENTLT----GTDIIQV 2176

Query: 169  EAADGDKGDRVTLS---LRGPYEKMFSIND-SGHISIVD-LSALNTSTIQLVVVATDTGN 223
             AADGD+G    +    + G   + F I+  +G I++   L    T T  L V A D G+
Sbjct: 2177 FAADGDEGTNGQVRYGIVNGNTNQEFRIDSVTGAITVAKPLDREKTPTYHLTVQAADRGS 2236

Query: 224  PPR 226
             PR
Sbjct: 2237 TPR 2239



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 44/149 (29%), Positives = 77/149 (51%), Gaps = 12/149 (8%)

Query: 95   GDISLMQCLDYETEDSYRFTVYATDTL---MTTSATVNISVVNVNDWDPRFRYPQYELFL 151
            G ++L+  LDYE   +Y   + A D+    + ++ T+NI +++ ND  P F  P+  LF+
Sbjct: 1265 GQVALIGKLDYEATPAYSLVIQAVDSGTIPLNSTCTLNIDILDENDNTPSF--PKSTLFV 1322

Query: 152  PHIPLADLTPGSVIGKVEAADGDKGDRVTL--SLRGPY-EKMFSIN-DSGHISIVDLSAL 207
                L ++  G ++  V A D D GD   L  S+ G      FSI+ ++G I +      
Sbjct: 1323 D--VLENMRIGELVSSVTATDSDSGDNADLYYSITGTNNHGTFSISPNTGSIFLAKKLDF 1380

Query: 208  NTSTI-QLVVVATDTGNPPRQASVPAIMH 235
             T ++ +L + A D G PPR +++  ++H
Sbjct: 1381 ETQSLYKLNITAKDQGRPPRSSTMSVVIH 1409



 Score = 54.7 bits (130), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 33/101 (32%), Positives = 48/101 (47%), Gaps = 5/101 (4%)

Query: 77   VKYWLSNDYGERFSIS-RQGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNV 135
            V Y + +   + F I    GD+   + LD E    Y   V A D L ++   +NI+V +V
Sbjct: 1775 VTYTIISGADDSFRIDPESGDLIATRRLDRERRSKYSLLVRADDGLQSSDMRINITVSDV 1834

Query: 136  NDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG 176
            ND  P+F  P Y   +P     D  PGS++  + A D D G
Sbjct: 1835 NDHTPKFSRPMYSFDIPE----DTIPGSLVAAILATDDDSG 1871



 Score = 54.3 bits (129), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 58/198 (29%), Positives = 88/198 (44%), Gaps = 24/198 (12%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLS-NDYGERFSISRQGDISLM 100
            F +  Y V+  E+ PVN     V     +   +  + Y ++  + G+ F I   G + + 
Sbjct: 996  FDQLSYEVTLSESEPVNSRFFKVQASDKDSGANGEIAYTIAEGNTGDAFGIFPDGQLYIK 1055

Query: 101  QCLDYETEDSYRFTVYATDTLMTT-SATVNISVV--NVNDWDPRFRYPQYELFLPHIPLA 157
              LD E +D Y   V A+D  +   SATVN++V+  +VND  P F    Y  +      A
Sbjct: 1056 SELDRELQDRYVLMVVASDRAVEPLSATVNVTVILEDVNDNRPLFNSTNYTFYFEEEQRA 1115

Query: 158  DLTPGSVIGKVEAADGDKGD----RVTLSLRGPYEKMFSINDSGHIS---IVDLSAL--- 207
                GS +GKV A D D G     R +  +  P  ++ +I  SG I+     D  +L   
Sbjct: 1116 ----GSFVGKVSAVDKDFGPNGEVRYSFEMVQPDFELHTI--SGEITNTYQFDRESLMRR 1169

Query: 208  -NTSTIQLVVVATDTGNP 224
              T+     V+ATD G P
Sbjct: 1170 RGTAVFSFTVIATDQGLP 1187



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 71/237 (29%), Positives = 104/237 (43%), Gaps = 22/237 (9%)

Query: 11  ITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNE-YSVSALENLPVNYVLLTVTT 69
           I L + A       + + A L+V+    +  + +FS+ E Y VS +EN P    LL +  
Sbjct: 548 IVLNISARDQGVHPKVSYAQLVVTLLDVNDEKPRFSQPEGYDVSVVENAPTGTELLMLRA 607

Query: 70  NKPRDL----RVKYWLSNDYGERFSISR---QGDISLMQCLDYETEDSYRFTVYATD--- 119
               DL     V++ L     +R S       G +S +  LD E +  Y   V ATD   
Sbjct: 608 TD-GDLGDNGTVRFSLQEAETDRRSFRLDPVSGRLSTISSLDREEQAFYSLLVLATDLGS 666

Query: 120 TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRV 179
              ++   +N+S++++ND  P F   QY     HI   +   GS I  V A D D G   
Sbjct: 667 PPQSSMTRINVSLLDINDNSPVFYPVQY---FAHIK-ENEPGGSYITTVSATDPDLGTNG 722

Query: 180 TL--SLRGPYEKMFSIN-DSGHISI-VDLSALNTSTIQLVVVATDTGN--PPRQASV 230
           T+  S+       F +N  SG IS  + L     +  QL ++ATD GN   P QA V
Sbjct: 723 TVKYSISAGDRSRFQVNAQSGVISTRMALDREEKTAYQLQIIATDGGNLQSPNQAIV 779



 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 48/149 (32%), Positives = 69/149 (46%), Gaps = 12/149 (8%)

Query: 95   GDISLMQCLDYETEDSYRFTVYATDTL----MTTSATVNISVVNVNDWDPRFRYPQYELF 150
            G I     LD ET+D+Y   V  +D      +++S +V ++V +VND  PRF   Q+  +
Sbjct: 2415 GQIITSALLDRETKDNYTLVVVCSDAGYPEPLSSSTSVLVTVTDVNDNPPRF---QHHPY 2471

Query: 151  LPHIPLADLTPGSVIGKVEAADGDKGDRVTL--SLRGPYEKMFSINDSGHISIVDLSALN 208
            + HIP   L PGS +  V   D D G    L  SL G   + F I D    +I+    LN
Sbjct: 2472 VTHIPSPTL-PGSFVFAVTVTDADIGPNSELHYSLSGRNSEKFHI-DPLRGAIMAAGPLN 2529

Query: 209  -TSTIQLVVVATDTGNPPRQASVPAIMHF 236
              S +   V   D G+ P+  S    + F
Sbjct: 2530 GASEVTFSVHVKDGGSFPKTDSTTVTVRF 2558



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 49/176 (27%), Positives = 76/176 (43%), Gaps = 34/176 (19%)

Query: 89   FSISRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYP 145
            F++S  G++ + Q LD ET++ +   + A D     +T + T+N+ V +VND  P F   
Sbjct: 2308 FTLSASGELGVTQSLDRETKEQFVLMITAVDGGSPALTGTGTINVIVDDVNDNVPTFASK 2367

Query: 146  QYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDS-GHI---SI 201
             Y   +P     D   G+ +  V A+D D      + + G     F+IN S G I   ++
Sbjct: 2368 AYFTTIPE----DAPTGTDVLLVNASDADASTNAVVRIIGG-NSQFTINPSTGQIITSAL 2422

Query: 202  VDLSALNTSTIQLVVVATDTG--------------------NPPRQASVPAIMHFP 237
            +D    +  T  LVVV +D G                    NPPR    P + H P
Sbjct: 2423 LDRETKDNYT--LVVVCSDAGYPEPLSSSTSVLVTVTDVNDNPPRFQHHPYVTHIP 2476



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 53/197 (26%), Positives = 94/197 (47%), Gaps = 20/197 (10%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRDLR--VKYWLS-NDYGERFSISR-QGDISLM 100
           F +  YS    EN+ + Y + +V+ +   DL   + Y ++  D    F+I++  G ++  
Sbjct: 793 FGQVAYSFVVFENVALGYHVGSVSAST-MDLNSNISYLITTGDQKGMFAINQVTGQLTTA 851

Query: 101 QCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLT 160
             +D E +  Y+  V A+   +T    VNI+V ++ND  P         FL  I   D+ 
Sbjct: 852 NVIDREEQSFYQLKVVASGGTVTGDTMVNITVKDLNDNSPH--------FLQAIESVDVV 903

Query: 161 ----PGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIN-DSGHISIVDLSALNTSTIQ 213
                G  I + +A D D+G    V  SL+   + +F+IN  +G IS++    +   + Q
Sbjct: 904 ENWQAGHSIFQAKAVDPDEGVNGMVLYSLKQNPKNLFAINGKNGTISLLGPLDVQAGSYQ 963

Query: 214 LVVVATDTGNPPRQASV 230
           + ++A+D G P   +SV
Sbjct: 964 IEILASDMGVPQLSSSV 980



 Score = 43.5 bits (101), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 42/161 (26%), Positives = 74/161 (45%), Gaps = 16/161 (9%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGERFSIS-RQGDISLM 100
            F  ++Y  + LEN P    ++ +     +   +  + Y + +   + F +    G I+  
Sbjct: 3194 FLSDDYFPTVLENAPSGTTVIHLNATDADSGTNAVIAYTVQSSDSDLFVVDPNTGVITTQ 3253

Query: 101  QCLDYETEDSYRFTVYA---TDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLA 157
              LD+ET+ SY  TV A    D    + ATVN+ +   N++ PRF    Y     +  ++
Sbjct: 3254 GFLDFETKQSYHLTVKAFNVPDEERCSFATVNVQLKGTNEYVPRFVSKLY-----YFEIS 3308

Query: 158  DLTP-GSVIGKVEAAD---GDKGDRVTLSLRGPYEKMFSIN 194
            +  P G+++G+V A+D   G  G+   L      +K F IN
Sbjct: 3309 EAAPKGTIVGEVFASDRDLGTDGEVHYLIFGNSRKKGFQIN 3349



 Score = 39.7 bits (91), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 55/108 (50%), Gaps = 7/108 (6%)

Query: 89   FSISRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYP 145
            FS+S  G +S  + +D E    +  +V   D+    M+++ TV+I+V++ ND   + R  
Sbjct: 3558 FSLSTVGVLSTTREIDREQIADFYLSVVTKDSGVPQMSSTGTVHITVIDQNDNPSQSR-- 3615

Query: 146  QYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSI 193
              E+F+ +    +L PG ++G V+  D D  D    SL      +FSI
Sbjct: 3616 TVEIFVNY--YGNLFPGGILGSVKPQDPDVLDSFHCSLTSGVTSLFSI 3661


>gi|397517980|ref|XP_003829180.1| PREDICTED: protocadherin gamma-C4 [Pan paniscus]
          Length = 871

 Score = 72.0 bits (175), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 66/230 (28%), Positives = 104/230 (45%), Gaps = 22/230 (9%)

Query: 13  LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKP 72
           LV+ A+   N  R   A L VS    +     F ++ Y +S LE+ P   VL+ +  + P
Sbjct: 210 LVLTAVDGGNPPRSGTAELRVSVLDVNDNAPAFQQSSYRISVLESAPAGMVLIQLNASDP 269

Query: 73  RDL----RVKYWLSNDYGER----FSI-SRQGDISLMQCLDYETEDSYRFTVYATD---T 120
            DL     V Y+ S    +R    FS+    G ++L+  LD+E+E+ Y F V A D    
Sbjct: 270 -DLGPSGNVTYYFSGHTPDRVRNLFSLHPTTGKLTLLGPLDFESENYYEFDVRARDGGSP 328

Query: 121 LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVT 180
            M    ++ + +++VND  P          LP        PG+V+  +   D D G    
Sbjct: 329 AMEQHCSLRVDLLDVNDNAPYITVTSELGTLPE----SAEPGTVVALISVQDPDSGSNGD 384

Query: 181 LSLRGPYEKMFSINDS--GHISIVDLSALN---TSTIQLVVVATDTGNPP 225
           +SLR P    F++  +     S+V    L+    S+  ++V A+D GNPP
Sbjct: 385 VSLRIPDHLPFALKSAFRNQFSLVTAGPLDREAKSSYDIMVTASDAGNPP 434



 Score = 47.0 bits (110), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 45/169 (26%), Positives = 78/169 (46%), Gaps = 27/169 (15%)

Query: 77  VKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVV 133
           + + L + +  +FS+   G       LD E + SY   V A+D     ++T  T+ +++ 
Sbjct: 393 LPFALKSAFRNQFSLVTAGP------LDREAKSSYDIMVTASDAGNPPLSTHRTIFLNIS 446

Query: 134 NVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMF 191
           +VND  P F    +E+F+P     +  PG ++  + A+D D G    ++ SL  P  +  
Sbjct: 447 DVNDNPPSFFQRSHEVFVPE----NNRPGDLLCSLAASDPDSGLNALISYSLLEPRNR-- 500

Query: 192 SINDSGHISIVDLSAL----------NTSTIQLVVVATDTGNPPRQASV 230
            ++ S  IS+   +             T T+Q  V A D GNPP  ++V
Sbjct: 501 DVSASSFISLNPQTGAVHATRSFDYEQTQTLQFEVQARDRGNPPLSSTV 549



 Score = 44.7 bits (104), Expect = 0.081,   Method: Compositional matrix adjust.
 Identities = 50/190 (26%), Positives = 83/190 (43%), Gaps = 15/190 (7%)

Query: 95  GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYE--L 149
           G +   +  DYE   + +F V A D     ++++ TV + V+++ND  P    P+     
Sbjct: 515 GAVHATRSFDYEQTQTLQFEVQARDRGNPPLSSTVTVRLFVLDLNDNAPAVLRPRARPGS 574

Query: 150 FLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIND-SGHISIVDLS 205
             P      +  G +I KV A D D G    +S   L  P   +F+++  +G +      
Sbjct: 575 LCPQALPPSVGAGHLITKVTAVDLDSGYNAWVSYQLLEAPDPSLFAVSRYAGEVRTAVPI 634

Query: 206 ALNTSTIQLVVVATDTGNPPRQASVPAIMHFPE---AIVQ--QASSKLNSGTSSTVLIIL 260
             +    +LV+V  D+G+PP   SV  ++   E    +V   + SS    G S   L  L
Sbjct: 635 PADLPPQKLVIVVKDSGSPPLSTSVTLLVSLEEDTHPVVPDLRESSAPREGESRLTL-YL 693

Query: 261 GVVLIVLGFV 270
            V L+ + FV
Sbjct: 694 AVSLVAICFV 703


>gi|350418958|ref|XP_003492024.1| PREDICTED: LOW QUALITY PROTEIN: cadherin-related tumor
            suppressor-like [Bombus impatiens]
          Length = 4964

 Score = 72.0 bits (175), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 59/206 (28%), Positives = 100/206 (48%), Gaps = 15/206 (7%)

Query: 44   QFSKNEYSVSALENLPVN-YVLLTVTTNKPRDL--RVKYWLSNDYGERFSISRQ-GDISL 99
            +F++ EY  +  ENL    +V     T+K   L  +++Y L  +  ERF++  + G++  
Sbjct: 2372 EFTRQEYRATVTENLASGTWVTKPHATDKDEGLNAKIRYSLLGENSERFTVEPETGEVLT 2431

Query: 100  MQCLDYETEDSYRFTVYATDTLMT----TSATVNISVVNVNDWDPRFRYPQYELFLPHIP 155
            +  LD E    Y  T+ A D+  T    ++  + I V +VND  PRF  P+Y  ++P   
Sbjct: 2432 VVPLDREQTSVYHLTLVAQDSSPTEPQASAVNLTIFVKDVNDNAPRFSSPRYTAYVP--- 2488

Query: 156  LADLTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSIN-DSGHISIVDLSALNTSTI 212
                 PG  +   +A D D G+  R+   L+G   + F I+ +SG I      A + +T 
Sbjct: 2489 -GATKPGDFVFGAKAVDDDDGENSRIVYRLQGIDAEKFVIDPNSGVIRTTQELANDETTY 2547

Query: 213  QLVVVATDTGNPPRQASVPAIMHFPE 238
            QL + A+D G  P+  +   ++H  E
Sbjct: 2548 QLQIQASDCGVKPQTVTADLVIHLWE 2573



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 52/167 (31%), Positives = 82/167 (49%), Gaps = 12/167 (7%)

Query: 72   PRDLRVKYWLSNDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSAT 127
            P + +V+Y+L     + F I +  GDI L++ LD E    Y  T+ A DT    +T S  
Sbjct: 2299 PYNDQVRYFLKEGDTDLFRINASTGDIFLLRPLDRELVAEYTLTLVAMDTGSPPLTGSGI 2358

Query: 128  VNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRG 185
            V I V++VND  P F   +Y   +      +L  G+ + K  A D D+G   ++  SL G
Sbjct: 2359 VRIVVLDVNDHIPEFTRQEYRATVTE----NLASGTWVTKPHATDKDEGLNAKIRYSLLG 2414

Query: 186  PYEKMFSIN-DSGHI-SIVDLSALNTSTIQLVVVATDTGNPPRQASV 230
               + F++  ++G + ++V L    TS   L +VA D+     QAS 
Sbjct: 2415 ENSERFTVEPETGEVLTVVPLDREQTSVYHLTLVAQDSSPTEPQASA 2461



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 63/214 (29%), Positives = 104/214 (48%), Gaps = 19/214 (8%)

Query: 25  RYALATLIVSKAGTSLRELQFSKNEYSVSALEN---LPVNYVLLTVTTNKPRDLRVKYWL 81
           +YA   L V+    +    +FS+N   V+  EN         L  V  ++  +  V Y  
Sbjct: 525 KYASTHLKVTILDENDEAPRFSQNVVRVTLSENTXXXXXXXXLTAVDNDQGTNGSVAYSF 584

Query: 82  ----SNDYGERFSISR-QGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVV 133
               S DY + F++    G ++    LD ET   Y+  V A D      +++ATV +++ 
Sbjct: 585 HSSVSRDYPKTFALDGLTGQLTTKVNLDRETTAEYQILVIAKDQGTPPQSSTATVILTLE 644

Query: 134 NVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMF 191
           +VND  P F YP +   +P IP  D  PG+ +GKV A D D  +  +V  SL    E +F
Sbjct: 645 DVNDNSPVF-YP-WRYLMP-IP-EDAPPGTSVGKVTATDADARENAQVRYSLESGGEGLF 700

Query: 192 SIND-SGHISIV-DLSALNTSTIQLVVVATDTGN 223
           ++++ +G I++   L A + +  +L + A DTG+
Sbjct: 701 TVDERTGEITLQGSLRAAHKTLYELNISAKDTGD 734



 Score = 51.6 bits (122), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 51/198 (25%), Positives = 95/198 (47%), Gaps = 22/198 (11%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTTNK---PRDLRVKYWLSNDYGERFSI-SRQGDISL 99
            QF++  +SV+  EN  +   ++ +T++     ++  V Y  + + GE+F++ +  G++++
Sbjct: 2789 QFTR-LFSVNVTENAEIGTFVIRITSSDLDIGQNANVTYRFTENPGEKFAMDALSGNVTV 2847

Query: 100  MQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADL 159
               LD E +D Y   + A D     +  + I++ + ND  P F    Y    P +     
Sbjct: 2848 DGHLDREEQDEYLLKLVAADGAWQAATALTITIQDQNDNPPEFDEESYHFHFPEL----Q 2903

Query: 160  TPGSVIGKVEAADGDK---GDRVTLSLRGPYEKMFSINDS-GHI-SIVDLSALNT----- 209
             P + +G+V A D DK      ++ SL  P + +F+++ + G + S   L   +T     
Sbjct: 2904 PPVAHVGQVTAIDRDKQGPNSVISYSLLQPSD-LFTVDPATGDVFSKKTLKYKHTHRPSS 2962

Query: 210  --STIQLVVVATDTGNPP 225
              +   L VVATD G PP
Sbjct: 2963 PENLYSLTVVATDNGKPP 2980



 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 46/143 (32%), Positives = 68/143 (47%), Gaps = 12/143 (8%)

Query: 95   GDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHI 154
            G ++L + LD ET + Y   V A D L  T   + I V + ND  P F+   Y   +P  
Sbjct: 1795 GQLTLAEALDRETREKYVLKVRADDGLQHTDIALTIQVTDTNDNAPTFQSTAYSFDVPE- 1853

Query: 155  PLADLTPGSVIGKVEAADGD-KGDRVTLS---LRGPYEKMFSINDSGHISIVDLSALNTS 210
               ++  GS IG+V A D D  G    LS   +      +FS+N S  +  +  ++L+  
Sbjct: 1854 ---NVPRGSRIGQVVATDADANGPNSQLSYTLISDWANDVFSLNPSTGVFTL-TASLDYE 1909

Query: 211  TIQ---LVVVATDTGNPPRQASV 230
             +Q   LVV ATD G P   ++V
Sbjct: 1910 QVQHYILVVQATDGGIPALSSTV 1932



 Score = 45.4 bits (106), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 41/109 (37%), Positives = 55/109 (50%), Gaps = 11/109 (10%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTV-TTNKPRDLRVKYWLS----NDYGERFSISRQ-GDI 97
            QF +  Y V   E   +   LL V TT+    L    + S    N +G RF+I    G I
Sbjct: 1182 QFQRLPYKVQVNEGAAIGTQLLRVYTTDADEGLNGDVFYSLEDGNQHG-RFAIDEATGQI 1240

Query: 98   SLMQCLDYETEDSYRFTVYATD----TLMTTSATVNISVVNVNDWDPRF 142
            SL + LD ET D+Y  TV A D    T +++S TV+I V++ ND  P F
Sbjct: 1241 SLTKELDRETTDAYVLTVVAHDAGLETRLSSSTTVHIEVLDENDNVPLF 1289



 Score = 44.7 bits (104), Expect = 0.077,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 61/138 (44%), Gaps = 6/138 (4%)

Query: 95  GDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHI 154
           G IS   CLD E    Y   + A   L     +VNI+V+++ND  PRF  P+ E+    +
Sbjct: 817 GTISTSGCLDREQVAYYSLQLSARAGLAYGQTSVNITVLDINDNPPRF--PKGEIGDEVL 874

Query: 155 PLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDSGHISIVD--LSALNTS 210
              +   G  +    A D D     R+  SL       F + ++  I  +D  + A   +
Sbjct: 875 LKENAAVGQEVCLARARDRDASANARIVYSLTHNPGGQFRVAENSGIIYLDKPIRAAPGT 934

Query: 211 TIQLVVVATDTGNPPRQA 228
            + L V ATD+GN P  A
Sbjct: 935 VLHLEVTATDSGNQPLSA 952



 Score = 44.7 bits (104), Expect = 0.081,   Method: Compositional matrix adjust.
 Identities = 57/223 (25%), Positives = 100/223 (44%), Gaps = 37/223 (16%)

Query: 45  FSKNEYSVSALENLPVNYVLLTV-TTNKPRD--LRVKYWLSNDYGERFSISRQ-GDISLM 100
           F +++Y V+  E+ PV   +LTV  T+K  +   ++ Y+L  D   +F+I  + G I+ +
Sbjct: 212 FQQSDYVVALNESAPVGTKVLTVHATDKDSEDNSKLTYYLP-DTERQFTIDPETGTITTV 270

Query: 101 QCLDYETED-------------SYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRY 144
           + LD   +              S   TV+A D           V +++++ ND DP  ++
Sbjct: 271 EPLDCPQQSCTIAARLGDGCPKSCVITVFARDHGSPRQDGRTYVTVNLLDANDHDPEIKF 330

Query: 145 PQYELFLPHIPL-----ADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYE-KMFSINDS 196
                + P  P       +    S++  V   D D+G     T+ +R   E   F ++++
Sbjct: 331 S----YFPSTPGFATVDENAAKDSIVAAVAVIDNDEGLNGETTVEIRAGNELGHFRLDNT 386

Query: 197 GHISIVDLSA-LNTSTI---QLVVVATDTGNPPRQASVPAIMH 235
               IV ++  L+   I    L VVATD G PPR A+   ++H
Sbjct: 387 PSFDIVRVNGRLDREEIPKYNLTVVATDKGTPPRSATAYLVIH 429



 Score = 44.3 bits (103), Expect = 0.095,   Method: Compositional matrix adjust.
 Identities = 50/187 (26%), Positives = 79/187 (42%), Gaps = 29/187 (15%)

Query: 76   RVKYWLSNDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNIS 131
            +V Y+L ND+ E F I S  G+IS    LD E   SY   V A D     +T +ATV ++
Sbjct: 2720 QVSYYLVNDFTETFVIDSDTGEISTNAKLDREEIASYELIVEARDQGQPSLTGTATVLLT 2779

Query: 132  VVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR---GPYE 188
            V++ ND  P+F      LF  ++   +   G+ + ++ ++D D G    ++ R    P E
Sbjct: 2780 VLDKNDNPPQFT----RLFSVNV-TENAEIGTFVIRITSSDLDIGQNANVTYRFTENPGE 2834

Query: 189  KMFSINDSGHIS-----------------IVDLSALNTSTIQLVVVATDTGNPPRQASVP 231
            K      SG+++                 +    A   +T   + +     NPP      
Sbjct: 2835 KFAMDALSGNVTVDGHLDREEQDEYLLKLVAADGAWQAATALTITIQDQNDNPPEFDEES 2894

Query: 232  AIMHFPE 238
               HFPE
Sbjct: 2895 YHFHFPE 2901



 Score = 42.4 bits (98), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 55/238 (23%), Positives = 101/238 (42%), Gaps = 20/238 (8%)

Query: 13  LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVT-TNK 71
           L V A       R A A L++     +  E  F ++EYS    E  P    + +++ T+ 
Sbjct: 408 LTVVATDKGTPPRSATAYLVIHVNDVNDHEPVFQQSEYSAVLSELSPTGSFVASISATDA 467

Query: 72  PRDLRVKYWLSNDYGER---FSISRQ-GDISLMQCLDYETEDSYRFTVYATD---TLMTT 124
              L  + +   D G     F+I +  G ++ +  LD E + S    V A D        
Sbjct: 468 DSGLNARIYYDFDSGNEQGWFAIDQDTGLVTTVATLDREVQGSIELHVSARDGGPNPKYA 527

Query: 125 SATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTL--- 181
           S  + +++++ ND  PRF      + L      +         + A D D+G   ++   
Sbjct: 528 STHLKVTILDENDEAPRFSQNVVRVTLSE----NTXXXXXXXXLTAVDNDQGTNGSVAYS 583

Query: 182 ---SLRGPYEKMFSIND-SGHISI-VDLSALNTSTIQLVVVATDTGNPPRQASVPAIM 234
              S+   Y K F+++  +G ++  V+L    T+  Q++V+A D G PP+ ++   I+
Sbjct: 584 FHSSVSRDYPKTFALDGLTGQLTTKVNLDRETTAEYQILVIAKDQGTPPQSSTATVIL 641



 Score = 42.0 bits (97), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 44/136 (32%), Positives = 66/136 (48%), Gaps = 14/136 (10%)

Query: 103 LDYETEDSYRFTVYATDTLM---TTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADL 159
           LD E    Y  TV ATD      + +A + I V +VND +P F+  +Y        L++L
Sbjct: 398 LDREEIPKYNLTVVATDKGTPPRSATAYLVIHVNDVNDHEPVFQQSEYSAV-----LSEL 452

Query: 160 TP-GSVIGKVEAADGDKG--DRVTLSL-RGPYEKMFSIN-DSGHISIV-DLSALNTSTIQ 213
           +P GS +  + A D D G   R+      G  +  F+I+ D+G ++ V  L      +I+
Sbjct: 453 SPTGSFVASISATDADSGLNARIYYDFDSGNEQGWFAIDQDTGLVTTVATLDREVQGSIE 512

Query: 214 LVVVATDTGNPPRQAS 229
           L V A D G  P+ AS
Sbjct: 513 LHVSARDGGPNPKYAS 528



 Score = 41.6 bits (96), Expect = 0.66,   Method: Compositional matrix adjust.
 Identities = 34/112 (30%), Positives = 55/112 (49%), Gaps = 9/112 (8%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTTN----KPRDLRVKY-WLSNDYGERFSISRQ-GDI 97
            +F +N Y  +  E       +LTV       KP++ +  Y  +S + G+ F +  Q GDI
Sbjct: 3387 EFLQNTYDATVSEGAAHGTRVLTVRAVDKDIKPQNNQFSYSIISGNLGQAFKVDPQTGDI 3446

Query: 98   SLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQ 146
               + LD ET   Y  T+ A DT     T +A ++I ++++ND  P F  P+
Sbjct: 3447 ETAKQLDRETIPIYDLTIGAIDTGTPPQTGTAAIHIELLDINDNGPTFDPPE 3498



 Score = 41.2 bits (95), Expect = 0.77,   Method: Compositional matrix adjust.
 Identities = 52/205 (25%), Positives = 85/205 (41%), Gaps = 32/205 (15%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSN-DYGERFSISRQGDISLM 100
            F    ++   +EN  +   +L+V     +   + RV Y ++  D    F ++  G +   
Sbjct: 1948 FEAGPHAADIVENTTIGTPILSVAAQDLDSGDNGRVIYAVAGGDENGDFGVAPNGTLFTR 2007

Query: 101  QCLDYETEDSYRFTVYATDT----LMTTSATVNISVV--NVNDWDPRFRYPQYELFLPHI 154
            + LD E +  Y   + ATD+     +  S TV ++VV  +VND  P F  P     + + 
Sbjct: 2008 KLLDREQKPLYNLILSATDSPLPPALPLSCTVQVTVVLLDVNDMSPEFISPTKISIIENA 2067

Query: 155  PLADLTPGSVIGKVEAADGDKGDR--VTLSLR--------GPYEKMFSINDSGHISIVDL 204
            P       +V+  ++A D D+G    V  SL         GP + +  ++ S       L
Sbjct: 2068 P-----SNTVVMAIKAVDRDEGRNGYVEYSLEDTTLPFTVGPVDGLLRVSGS-------L 2115

Query: 205  SALNTSTIQLVVVATDTGNPPRQAS 229
                 S   L V A D G PPR +S
Sbjct: 2116 DRELRSNYTLEVTAKDRGEPPRSSS 2140



 Score = 41.2 bits (95), Expect = 0.79,   Method: Compositional matrix adjust.
 Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 7/95 (7%)

Query: 30   TLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRD-----LRVKYWLSND 84
            TL++S  G +     F+   + V   EN PVN  +LTV+     D     +R K    N+
Sbjct: 3095 TLVIS--GENKHAPTFAAVSHQVRVPENEPVNTTILTVSATDGDDGPNGMIRYKISAGNE 3152

Query: 85   YGERFSISRQGDISLMQCLDYETEDSYRFTVYATD 119
              E F  S  G +++++ LDY+    Y+  + ATD
Sbjct: 3153 KNEFFVHSITGAVTILEPLDYDLVQEYKLNITATD 3187


>gi|332820147|ref|XP_526682.3| PREDICTED: protocadherin Fat 4 isoform 2 [Pan troglodytes]
          Length = 4981

 Score = 71.6 bits (174), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 79/265 (29%), Positives = 119/265 (44%), Gaps = 44/265 (16%)

Query: 2    INEDD-----FLQPITLV---VRAIQYDNQDRYALATLIVSKAGTSLRELQ--------- 44
            +NEDD     FL PIT V    R + Y+ Q  Y L T+     G     ++         
Sbjct: 1880 VNEDDEDGIFFLNPITGVFNLTRLLDYEVQQYYIL-TVRAEDGGGQFTTIRVYFNILDVN 1938

Query: 45   -----FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWL-SNDYGERFSISRQG 95
                 FS N YS S +ENLPV   +L        D    ++ Y + S D   +F++ + G
Sbjct: 1939 DNPPIFSLNSYSTSLMENLPVGSTVLVFNVTDADDGINSQLTYSIASGDSLGQFTVDKNG 1998

Query: 96   DISLMQCLDYETEDSYRFTVYATD------TLMTTSATVNISVVNVNDWDPRFRYPQYEL 149
             + +++ LD E++  Y   V   D      +  T++A V+I +++VND  P F  P+   
Sbjct: 1999 VLKVLKALDRESQSFYNLVVQVHDLPQIPASRFTSTAQVSIILLDVNDNPPTFLSPK--- 2055

Query: 150  FLPHIPLADLTP-GSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIND-SGHISIV-DL 204
             L +IP  + TP  +V+ K +A D D G    +  +L  P    FSI    G + +  +L
Sbjct: 2056 -LTYIP--ENTPIDTVVFKAQATDPDSGPNSYIEYTLLNPLGNKFSIGTIDGEVRLTGEL 2112

Query: 205  SALNTSTIQLVVVATDTGNPPRQAS 229
                 S   L VVATD G P   +S
Sbjct: 2113 DREEVSNYTLTVVATDKGQPSLSSS 2137



 Score = 58.2 bits (139), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 47/158 (29%), Positives = 82/158 (51%), Gaps = 13/158 (8%)

Query: 87   ERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDTL---MTTSATVNISVVNVNDWDPRF 142
             +F+I S  G ++L+  LDYE   +Y   + A D+    + ++ T+NI +++ ND  P F
Sbjct: 1256 RQFAIDSTSGQVALIGKLDYEATPAYSLVIQAVDSGTIPLNSTCTLNIDILDENDNTPSF 1315

Query: 143  RYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTL--SLRGPY-EKMFSIN-DSGH 198
              P+  LF+    L ++  G ++  V A D D GD   L  S+ G      FSI+ ++G 
Sbjct: 1316 --PKSTLFVD--VLENMRIGELVSSVTATDSDSGDNADLYYSITGTNNHGTFSISPNTGS 1371

Query: 199  ISIVDLSALNTSTI-QLVVVATDTGNPPRQASVPAIMH 235
            I +       T ++ +L + A D G PPR +++  ++H
Sbjct: 1372 IFLAKKLDFETQSLYKLNITAKDQGRPPRSSTMSVVIH 1409



 Score = 55.8 bits (133), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 57/183 (31%), Positives = 89/183 (48%), Gaps = 16/183 (8%)

Query: 56   ENLPVNYVLLTVTTNKPR---DLRVKYWLSNDYGERFSISR-QGDISLMQCLDYETEDSY 111
            EN P++ V+       P    +  ++Y L N  G +FSI    G++ L   LD E   +Y
Sbjct: 2061 ENTPIDTVVFKAQATDPDSGPNSYIEYTLLNPLGNKFSIGTIDGEVRLTGELDREEVSNY 2120

Query: 112  RFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKV 168
              TV ATD     +++S  V + V+++ND +P F    Y++ +    L     G+ I +V
Sbjct: 2121 TLTVVATDKGQPSLSSSTEVVVVVLDINDNNPIFAQALYKVEINENTLT----GTDIIQV 2176

Query: 169  EAADGDKGDRVTLS---LRGPYEKMFSIND-SGHISIVD-LSALNTSTIQLVVVATDTGN 223
             AADGD+G    +    + G   + F I+  +G I++   L    T T  L V ATD G+
Sbjct: 2177 FAADGDEGTNGQVRYGIVNGNTNQEFRIDSVTGAITVAKPLDREKTPTYHLTVQATDRGS 2236

Query: 224  PPR 226
             PR
Sbjct: 2237 TPR 2239



 Score = 55.1 bits (131), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 59/198 (29%), Positives = 88/198 (44%), Gaps = 24/198 (12%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLS-NDYGERFSISRQGDISLM 100
            F +  Y V+  E+ PVN     V     +   +  + Y ++  + G+ F I   G + + 
Sbjct: 996  FDQLSYEVTLSESEPVNSRFFKVQASDKDSGANGEIAYTIAEGNTGDAFGIFPDGQLYIK 1055

Query: 101  QCLDYETEDSYRFTVYATDTLMTT-SATVNISVV--NVNDWDPRFRYPQYELFLPHIPLA 157
              LD E +D Y   V A+D  +   SATVN++V+  +VND  P F    Y  +      A
Sbjct: 1056 SELDRELQDRYVLMVVASDRAVEPLSATVNVTVILEDVNDNRPLFNSTNYTFYFEEEQRA 1115

Query: 158  DLTPGSVIGKVEAADGDKGD----RVTLSLRGPYEKMFSINDSGHIS---IVDLSAL--- 207
                GS +GKV A D D G     R +  +  P  ++ +I  SG I+     D  +L   
Sbjct: 1116 ----GSFVGKVSAVDKDFGPNGEVRYSFEMVQPDFELHAI--SGEITNTHQFDRESLMRQ 1169

Query: 208  -NTSTIQLVVVATDTGNP 224
              T+     VVATD G P
Sbjct: 1170 RGTAVFSFTVVATDQGLP 1187



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 56/190 (29%), Positives = 95/190 (50%), Gaps = 15/190 (7%)

Query: 56   ENLPVNYVLLTVTTNKPRDLRVKYWL-SNDYGERFSISR-QGDISLMQCLDYETEDSYRF 113
            EN PV+ ++ T+T +  R   + Y++ S + G  F I +  G +S+ Q LD+E    Y  
Sbjct: 2578 ENQPVSSLVTTITGSSLRGEPMSYYIASGNLGNTFQIDQLTGQVSISQPLDFEKIQKYVV 2637

Query: 114  TVYATDTL---MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEA 170
             + A D      ++   ++I+V++VND  P F+    + F+  I L +L+P  ++  V A
Sbjct: 2638 WIEARDGGFPPFSSYEKLDITVLDVNDNAPIFK---EDPFISEI-LENLSPRKIL-TVSA 2692

Query: 171  ADGDKGDRVTLS---LRGPYEKMFSINDS-GHI-SIVDLSALNTSTIQLVVVATDTGNPP 225
             D D G    L    + G  E  FSIN + G I S+  L     S   L + ++D G+P 
Sbjct: 2693 MDKDSGPNGQLDYEIVNGNMENSFSINHATGEIRSVRPLDREKVSHYVLTIKSSDKGSPS 2752

Query: 226  RQASVPAIMH 235
            +  SV  +++
Sbjct: 2753 QSTSVKVMIN 2762



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/101 (32%), Positives = 48/101 (47%), Gaps = 5/101 (4%)

Query: 77   VKYWLSNDYGERFSIS-RQGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNV 135
            V Y + +   + F I    GD+   + LD E    Y   V A D L ++   +NI+V +V
Sbjct: 1775 VTYTIISGADDSFRIDPESGDLIATRRLDRERRSKYSLLVRADDGLQSSDMRINITVSDV 1834

Query: 136  NDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG 176
            ND  P+F  P Y   +P     D  PGS++  + A D D G
Sbjct: 1835 NDHTPKFSRPVYSFDIPE----DTIPGSLVAAILATDDDSG 1871



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 50/176 (28%), Positives = 78/176 (44%), Gaps = 34/176 (19%)

Query: 89   FSISRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYP 145
            F++S  G++ + Q LD ET++ +   + ATD+    +T + T+N+ V +VND  P F   
Sbjct: 2308 FTLSASGELGVTQSLDRETKERFVLMITATDSGSPALTGTGTINVIVDDVNDNVPTFASK 2367

Query: 146  QYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDS-GHI---SI 201
             Y   +P     D   G+ +  V A+D D      + + G     F+IN S G I   ++
Sbjct: 2368 AYFTTIPE----DAPTGTDVLLVNASDADASTNAVIRIIGG-NSQFTINPSTGQIITSAL 2422

Query: 202  VDLSALNTSTIQLVVVATDTG--------------------NPPRQASVPAIMHFP 237
            +D    +  T  LVVV +D G                    NPPR    P + H P
Sbjct: 2423 LDRETKDNYT--LVVVCSDAGSPEPLSSSTSVLVTVTDVNDNPPRFQHHPYVTHIP 2476



 Score = 51.6 bits (122), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 51/193 (26%), Positives = 97/193 (50%), Gaps = 12/193 (6%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRDLR--VKYWLS-NDYGERFSISR-QGDISLM 100
           FS+  YS    EN+ + Y + +V+ +   DL   + Y ++  D    F+I++  G ++  
Sbjct: 793 FSQVAYSFVVFENVALGYHVGSVSAST-MDLNSNISYLITTGDQKGMFAINQVTGQLTTA 851

Query: 101 QCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLT 160
             +D E +  Y+  V A+   +T    VNI+V ++ND  P F      + +    + +  
Sbjct: 852 NVIDREEQSFYQLKVVASGGTVTGDTMVNITVKDLNDNSPHFLQAIESVNV----VENWQ 907

Query: 161 PGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIND-SGHISIVDLSALNTSTIQLVVV 217
            G  I + +A D D+G    V  SL+   + +F+IN+ +G IS++    ++  + Q+ ++
Sbjct: 908 AGHSIFQAKAVDPDEGVNGMVLYSLKQNPKNLFTINEKNGTISLLGPLDVHAGSYQIEIL 967

Query: 218 ATDTGNPPRQASV 230
           A+D G P   +SV
Sbjct: 968 ASDMGVPQLSSSV 980



 Score = 51.6 bits (122), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 73/237 (30%), Positives = 104/237 (43%), Gaps = 22/237 (9%)

Query: 11  ITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNE-YSVSALENLPVNYVLLTVTT 69
           I L + A       + + A L+V+    +  +  FS+ E Y VS +EN P    LL +  
Sbjct: 548 IVLNISARDQGVHPKVSYAQLVVTLLDVNDEKPVFSQPEGYDVSVVENAPTGTELLMLRA 607

Query: 70  NKPRDL----RVKYWLSNDYGERFSISR---QGDISLMQCLDYETEDSYRFTVYATD--- 119
               DL     V++ L     +R S       G +S +  LD E +  Y   V ATD   
Sbjct: 608 TD-GDLGDNGTVRFSLQEAETDRRSFRLDPVSGRLSTISSLDREEQAFYSLLVLATDLGS 666

Query: 120 TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRV 179
              ++ A +N+S++++ND  P F   QY     HI   +   GS I  V A D D G   
Sbjct: 667 PPQSSMARINVSLLDINDNSPVFYPVQY---FAHIK-ENEPGGSYITTVSATDPDLGTNG 722

Query: 180 TL--SLRGPYEKMFSIN-DSGHISI-VDLSALNTSTIQLVVVATDTGN--PPRQASV 230
           T+  S+       F +N  SG IS  + L     +  QL +VATD GN   P QA V
Sbjct: 723 TVKYSISAGDRSRFQVNAQSGVISTRMALDREEKTAYQLQIVATDGGNLQSPNQAIV 779



 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 48/149 (32%), Positives = 69/149 (46%), Gaps = 12/149 (8%)

Query: 95   GDISLMQCLDYETEDSYRFTVYATDTL----MTTSATVNISVVNVNDWDPRFRYPQYELF 150
            G I     LD ET+D+Y   V  +D      +++S +V ++V +VND  PRF   Q+  +
Sbjct: 2415 GQIITSALLDRETKDNYTLVVVCSDAGSPEPLSSSTSVLVTVTDVNDNPPRF---QHHPY 2471

Query: 151  LPHIPLADLTPGSVIGKVEAADGDKGDRVTL--SLRGPYEKMFSINDSGHISIVDLSALN 208
            + HIP   L PGS +  V   D D G    L  SL G   + F I D    +I+    LN
Sbjct: 2472 VTHIPSPTL-PGSFVFAVTVTDADIGPNSELHYSLSGRNSEKFHI-DPLRGAIMAAGPLN 2529

Query: 209  -TSTIQLVVVATDTGNPPRQASVPAIMHF 236
              S +   V   D G+ P+  S    + F
Sbjct: 2530 GASEVTFSVHVKDGGSFPKTDSTTVTVRF 2558



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 57/192 (29%), Positives = 89/192 (46%), Gaps = 24/192 (12%)

Query: 50   YSVSALENLPVNYVLLTVTTNKPRDLRV----KYWLSNDYGERFSIS-RQGDISLMQCLD 104
            +S    EN  + Y +  VTT+   D+ +    +Y +  D    F+I+   GDI + + L+
Sbjct: 2777 FSAHVPENSSLGYTVTRVTTSD-EDVGINAISRYSIM-DASLPFTINPSTGDIVISRPLN 2834

Query: 105  YETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSV 164
             E  D YR  V A D+  T S  V I V ++ND  PRF    Y L  P   L ++  GS 
Sbjct: 2835 REDTDRYRIRVSAHDSGWTVSTDVTIFVTDINDNAPRFSRTSYYLDCPE--LTEI--GSK 2890

Query: 165  IGKVEAADGDKGD--RVTLSLRGPYEKMFSIN-DSGHI---------SIVDLSALNTSTI 212
            + +V A D D+G   +V   ++   E  F IN  +G I         ++   S +N +  
Sbjct: 2891 VAQVFATDPDEGSNGQVFYFIKSQSE-YFRINATTGEIFNKQILKYQNVTGFSNVNINRH 2949

Query: 213  QLVVVATDTGNP 224
              +V ++D G P
Sbjct: 2950 SFIVTSSDRGKP 2961



 Score = 44.3 bits (103), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 43/161 (26%), Positives = 74/161 (45%), Gaps = 16/161 (9%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGERFSIS-RQGDISLM 100
            F  ++Y  + LEN P    ++ +     +   +  + Y + +   + F I    G I+  
Sbjct: 3194 FLSDDYFPTVLENAPSGTTVIHLNATDADSGTNAVIAYTVQSSDSDLFVIDPNTGVITTQ 3253

Query: 101  QCLDYETEDSYRFTVYA---TDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLA 157
              LD+ET+ SY  TV A    D    + ATVN+ +   N++ PRF    Y     +  ++
Sbjct: 3254 GFLDFETKQSYHLTVKAFNVPDEERCSFATVNVQLKGTNEYVPRFVSKLY-----YFEIS 3308

Query: 158  DLTP-GSVIGKVEAAD---GDKGDRVTLSLRGPYEKMFSIN 194
            +  P G+++G+V A+D   G  G+   L      +K F IN
Sbjct: 3309 EAAPKGTIVGEVFASDRDLGTDGEVHYLIFGNSRKKGFQIN 3349



 Score = 40.8 bits (94), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 55/108 (50%), Gaps = 7/108 (6%)

Query: 89   FSISRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYP 145
            FS+S  G +S  + +D E    +  +V   D+    M+++ TV+I+V++ ND   + R  
Sbjct: 3558 FSLSTAGVLSTTREIDREQIADFYLSVVTKDSGVPQMSSTGTVHITVIDQNDNPSQSR-- 3615

Query: 146  QYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSI 193
              E+F+ +    +L PG ++G V+  D D  D    SL      +FSI
Sbjct: 3616 TVEIFVNY--YGNLFPGGILGSVKPQDPDVLDSFHCSLTSGVTSLFSI 3661


>gi|410220660|gb|JAA07549.1| FAT tumor suppressor homolog 4 [Pan troglodytes]
 gi|410307816|gb|JAA32508.1| FAT tumor suppressor homolog 4 [Pan troglodytes]
          Length = 4983

 Score = 71.6 bits (174), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 79/265 (29%), Positives = 119/265 (44%), Gaps = 44/265 (16%)

Query: 2    INEDD-----FLQPITLV---VRAIQYDNQDRYALATLIVSKAGTSLRELQ--------- 44
            +NEDD     FL PIT V    R + Y+ Q  Y L T+     G     ++         
Sbjct: 1880 VNEDDEDGIFFLNPITGVFNLTRLLDYEVQQYYIL-TVRAEDGGGQFTTIRVYFNILDVN 1938

Query: 45   -----FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWL-SNDYGERFSISRQG 95
                 FS N YS S +ENLPV   +L        D    ++ Y + S D   +F++ + G
Sbjct: 1939 DNPPIFSLNSYSTSLMENLPVGSTVLVFNVTDADDGINSQLTYSIASGDSLGQFTVDKNG 1998

Query: 96   DISLMQCLDYETEDSYRFTVYATD------TLMTTSATVNISVVNVNDWDPRFRYPQYEL 149
             + +++ LD E++  Y   V   D      +  T++A V+I +++VND  P F  P+   
Sbjct: 1999 VLKVLKALDRESQSFYNLVVQVHDLPQIPASRFTSTAQVSIILLDVNDNPPTFLSPK--- 2055

Query: 150  FLPHIPLADLTP-GSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIND-SGHISIV-DL 204
             L +IP  + TP  +V+ K +A D D G    +  +L  P    FSI    G + +  +L
Sbjct: 2056 -LTYIP--ENTPIDTVVFKAQATDPDSGPNSYIEYTLLNPLGNKFSIGTIDGEVRLTGEL 2112

Query: 205  SALNTSTIQLVVVATDTGNPPRQAS 229
                 S   L VVATD G P   +S
Sbjct: 2113 DREEVSNYTLTVVATDKGQPSLSSS 2137



 Score = 58.2 bits (139), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 47/158 (29%), Positives = 82/158 (51%), Gaps = 13/158 (8%)

Query: 87   ERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDTL---MTTSATVNISVVNVNDWDPRF 142
             +F+I S  G ++L+  LDYE   +Y   + A D+    + ++ T+NI +++ ND  P F
Sbjct: 1256 RQFAIDSTSGQVALIGKLDYEATPAYSLVIQAVDSGTIPLNSTCTLNIDILDENDNTPSF 1315

Query: 143  RYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTL--SLRGPY-EKMFSIN-DSGH 198
              P+  LF+    L ++  G ++  V A D D GD   L  S+ G      FSI+ ++G 
Sbjct: 1316 --PKSTLFVD--VLENMRIGELVSSVTATDSDSGDNADLYYSITGTNNHGTFSISPNTGS 1371

Query: 199  ISIVDLSALNTSTI-QLVVVATDTGNPPRQASVPAIMH 235
            I +       T ++ +L + A D G PPR +++  ++H
Sbjct: 1372 IFLAKKLDFETQSLYKLNITAKDQGRPPRSSTMSVVIH 1409



 Score = 55.8 bits (133), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 57/183 (31%), Positives = 89/183 (48%), Gaps = 16/183 (8%)

Query: 56   ENLPVNYVLLTVTTNKPR---DLRVKYWLSNDYGERFSISR-QGDISLMQCLDYETEDSY 111
            EN P++ V+       P    +  ++Y L N  G +FSI    G++ L   LD E   +Y
Sbjct: 2061 ENTPIDTVVFKAQATDPDSGPNSYIEYTLLNPLGNKFSIGTIDGEVRLTGELDREEVSNY 2120

Query: 112  RFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKV 168
              TV ATD     +++S  V + V+++ND +P F    Y++ +    L     G+ I +V
Sbjct: 2121 TLTVVATDKGQPSLSSSTEVVVVVLDINDNNPIFAQALYKVEINENTLT----GTDIIQV 2176

Query: 169  EAADGDKGDRVTLS---LRGPYEKMFSIND-SGHISIVD-LSALNTSTIQLVVVATDTGN 223
             AADGD+G    +    + G   + F I+  +G I++   L    T T  L V ATD G+
Sbjct: 2177 FAADGDEGTNGQVRYGIVNGNTNQEFRIDSVTGAITVAKPLDREKTPTYHLTVQATDRGS 2236

Query: 224  PPR 226
             PR
Sbjct: 2237 TPR 2239



 Score = 55.1 bits (131), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 59/198 (29%), Positives = 88/198 (44%), Gaps = 24/198 (12%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLS-NDYGERFSISRQGDISLM 100
            F +  Y V+  E+ PVN     V     +   +  + Y ++  + G+ F I   G + + 
Sbjct: 996  FDQLSYEVTLSESEPVNSRFFKVQASDKDSGANGEIAYTIAEGNTGDAFGIFPDGQLYIK 1055

Query: 101  QCLDYETEDSYRFTVYATDTLMTT-SATVNISVV--NVNDWDPRFRYPQYELFLPHIPLA 157
              LD E +D Y   V A+D  +   SATVN++V+  +VND  P F    Y  +      A
Sbjct: 1056 SELDRELQDRYVLMVVASDRAVEPLSATVNVTVILEDVNDNRPLFNSTNYTFYFEEEQRA 1115

Query: 158  DLTPGSVIGKVEAADGDKGD----RVTLSLRGPYEKMFSINDSGHIS---IVDLSAL--- 207
                GS +GKV A D D G     R +  +  P  ++ +I  SG I+     D  +L   
Sbjct: 1116 ----GSFVGKVSAVDKDFGPNGEVRYSFEMVQPDFELHAI--SGEITNTHQFDRESLMRQ 1169

Query: 208  -NTSTIQLVVVATDTGNP 224
              T+     VVATD G P
Sbjct: 1170 RGTAVFSFTVVATDQGLP 1187



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 56/190 (29%), Positives = 95/190 (50%), Gaps = 15/190 (7%)

Query: 56   ENLPVNYVLLTVTTNKPRDLRVKYWL-SNDYGERFSISR-QGDISLMQCLDYETEDSYRF 113
            EN PV+ ++ T+T +  R   + Y++ S + G  F I +  G +S+ Q LD+E    Y  
Sbjct: 2580 ENQPVSSLVTTITGSSLRGEPMSYYIASGNLGNTFQIDQLTGQVSISQPLDFEKIQKYVV 2639

Query: 114  TVYATDTL---MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEA 170
             + A D      ++   ++I+V++VND  P F+    + F+  I L +L+P  ++  V A
Sbjct: 2640 WIEARDGGFPPFSSYEKLDITVLDVNDNAPIFK---EDPFISEI-LENLSPRKIL-TVSA 2694

Query: 171  ADGDKGDRVTLS---LRGPYEKMFSINDS-GHI-SIVDLSALNTSTIQLVVVATDTGNPP 225
             D D G    L    + G  E  FSIN + G I S+  L     S   L + ++D G+P 
Sbjct: 2695 MDKDSGPNGQLDYEIVNGNMENSFSINHATGEIRSVRPLDREKVSHYVLTIKSSDKGSPS 2754

Query: 226  RQASVPAIMH 235
            +  SV  +++
Sbjct: 2755 QSTSVKVMIN 2764



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/101 (32%), Positives = 48/101 (47%), Gaps = 5/101 (4%)

Query: 77   VKYWLSNDYGERFSIS-RQGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNV 135
            V Y + +   + F I    GD+   + LD E    Y   V A D L ++   +NI+V +V
Sbjct: 1775 VTYTIISGADDSFRIDPESGDLIATRRLDRERRSKYSLLVRADDGLQSSDMRINITVSDV 1834

Query: 136  NDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG 176
            ND  P+F  P Y   +P     D  PGS++  + A D D G
Sbjct: 1835 NDHTPKFSRPVYSFDIPE----DTIPGSLVAAILATDDDSG 1871



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 52/179 (29%), Positives = 79/179 (44%), Gaps = 38/179 (21%)

Query: 89   FSISRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYP 145
            F++S  G++ + Q LD ET++ +   + ATD+    +T + T+N+ V +VND  P F   
Sbjct: 2308 FTLSASGELGVTQSLDRETKERFVLMITATDSGSPALTGTGTINVIVDDVNDNVPTFASK 2367

Query: 146  QYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR---GPYEKMFSINDS-GHI-- 199
             Y   +P     D   G+ +  V A+D D      +S R   G     F+IN S G I  
Sbjct: 2368 AYFTTIPE----DAPTGTDVLLVNASDADASTNAVISYRIIGG--NSQFTINPSTGQIIT 2421

Query: 200  -SIVDLSALNTSTIQLVVVATDTG--------------------NPPRQASVPAIMHFP 237
             +++D    +  T  LVVV +D G                    NPPR    P + H P
Sbjct: 2422 SALLDRETKDNYT--LVVVCSDAGSPEPLSSSTSVLVTVTDVNDNPPRFQHHPYVTHIP 2478



 Score = 51.6 bits (122), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 51/193 (26%), Positives = 97/193 (50%), Gaps = 12/193 (6%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRDLR--VKYWLS-NDYGERFSISR-QGDISLM 100
           FS+  YS    EN+ + Y + +V+ +   DL   + Y ++  D    F+I++  G ++  
Sbjct: 793 FSQVAYSFVVFENVALGYHVGSVSAST-MDLNSNISYLITTGDQKGMFAINQVTGQLTTA 851

Query: 101 QCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLT 160
             +D E +  Y+  V A+   +T    VNI+V ++ND  P F      + +    + +  
Sbjct: 852 NVIDREEQSFYQLKVVASGGTVTGDTMVNITVKDLNDNSPHFLQAIESVNV----VENWQ 907

Query: 161 PGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIND-SGHISIVDLSALNTSTIQLVVV 217
            G  I + +A D D+G    V  SL+   + +F+IN+ +G IS++    ++  + Q+ ++
Sbjct: 908 AGHSIFQAKAVDPDEGVNGMVLYSLKQNPKNLFTINEKNGTISLLGPLDVHAGSYQIEIL 967

Query: 218 ATDTGNPPRQASV 230
           A+D G P   +SV
Sbjct: 968 ASDMGVPQLSSSV 980



 Score = 51.6 bits (122), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 73/237 (30%), Positives = 104/237 (43%), Gaps = 22/237 (9%)

Query: 11  ITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNE-YSVSALENLPVNYVLLTVTT 69
           I L + A       + + A L+V+    +  +  FS+ E Y VS +EN P    LL +  
Sbjct: 548 IVLNISARDQGVHPKVSYAQLVVTLLDVNDEKPVFSQPEGYDVSVVENAPTGTELLMLRA 607

Query: 70  NKPRDL----RVKYWLSNDYGERFSISR---QGDISLMQCLDYETEDSYRFTVYATD--- 119
               DL     V++ L     +R S       G +S +  LD E +  Y   V ATD   
Sbjct: 608 TD-GDLGDNGTVRFSLQEAETDRRSFRLDPVSGRLSTISSLDREEQAFYSLLVLATDLGS 666

Query: 120 TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRV 179
              ++ A +N+S++++ND  P F   QY     HI   +   GS I  V A D D G   
Sbjct: 667 PPQSSMARINVSLLDINDNSPVFYPVQY---FAHIK-ENEPGGSYITTVSATDPDLGTNG 722

Query: 180 TL--SLRGPYEKMFSIN-DSGHISI-VDLSALNTSTIQLVVVATDTGN--PPRQASV 230
           T+  S+       F +N  SG IS  + L     +  QL +VATD GN   P QA V
Sbjct: 723 TVKYSISAGDRSRFQVNAQSGVISTRMALDREEKTAYQLQIVATDGGNLQSPNQAIV 779



 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 48/149 (32%), Positives = 69/149 (46%), Gaps = 12/149 (8%)

Query: 95   GDISLMQCLDYETEDSYRFTVYATDTL----MTTSATVNISVVNVNDWDPRFRYPQYELF 150
            G I     LD ET+D+Y   V  +D      +++S +V ++V +VND  PRF   Q+  +
Sbjct: 2417 GQIITSALLDRETKDNYTLVVVCSDAGSPEPLSSSTSVLVTVTDVNDNPPRF---QHHPY 2473

Query: 151  LPHIPLADLTPGSVIGKVEAADGDKGDRVTL--SLRGPYEKMFSINDSGHISIVDLSALN 208
            + HIP   L PGS +  V   D D G    L  SL G   + F I D    +I+    LN
Sbjct: 2474 VTHIPSPTL-PGSFVFAVTVTDADIGPNSELHYSLSGRNSEKFHI-DPLRGAIMAAGPLN 2531

Query: 209  -TSTIQLVVVATDTGNPPRQASVPAIMHF 236
              S +   V   D G+ P+  S    + F
Sbjct: 2532 GASEVTFSVHVKDGGSFPKTDSTTVTVRF 2560



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 57/192 (29%), Positives = 89/192 (46%), Gaps = 24/192 (12%)

Query: 50   YSVSALENLPVNYVLLTVTTNKPRDLRV----KYWLSNDYGERFSIS-RQGDISLMQCLD 104
            +S    EN  + Y +  VTT+   D+ +    +Y +  D    F+I+   GDI + + L+
Sbjct: 2779 FSAHVPENSSLGYTVTRVTTSD-EDVGINAISRYSIM-DASLPFTINPSTGDIVISRPLN 2836

Query: 105  YETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSV 164
             E  D YR  V A D+  T S  V I V ++ND  PRF    Y L  P   L ++  GS 
Sbjct: 2837 REDTDRYRIRVSAHDSGWTVSTDVTIFVTDINDNAPRFSRTSYYLDCPE--LTEI--GSK 2892

Query: 165  IGKVEAADGDKGD--RVTLSLRGPYEKMFSIN-DSGHI---------SIVDLSALNTSTI 212
            + +V A D D+G   +V   ++   E  F IN  +G I         ++   S +N +  
Sbjct: 2893 VAQVFATDPDEGSNGQVFYFIKSQSE-YFRINATTGEIFNKQILKYQNVTGFSNVNINRH 2951

Query: 213  QLVVVATDTGNP 224
              +V ++D G P
Sbjct: 2952 SFIVTSSDRGKP 2963



 Score = 44.3 bits (103), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 43/161 (26%), Positives = 74/161 (45%), Gaps = 16/161 (9%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGERFSIS-RQGDISLM 100
            F  ++Y  + LEN P    ++ +     +   +  + Y + +   + F I    G I+  
Sbjct: 3196 FLSDDYFPTVLENAPSGTTVIHLNATDADSGTNAVIAYTVQSSDSDLFVIDPNTGVITTQ 3255

Query: 101  QCLDYETEDSYRFTVYA---TDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLA 157
              LD+ET+ SY  TV A    D    + ATVN+ +   N++ PRF    Y     +  ++
Sbjct: 3256 GFLDFETKQSYHLTVKAFNVPDEERCSFATVNVQLKGTNEYVPRFVSKLY-----YFEIS 3310

Query: 158  DLTP-GSVIGKVEAAD---GDKGDRVTLSLRGPYEKMFSIN 194
            +  P G+++G+V A+D   G  G+   L      +K F IN
Sbjct: 3311 EAAPKGTIVGEVFASDRDLGTDGEVHYLIFGNSRKKGFQIN 3351



 Score = 40.8 bits (94), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 55/108 (50%), Gaps = 7/108 (6%)

Query: 89   FSISRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYP 145
            FS+S  G +S  + +D E    +  +V   D+    M+++ TV+I+V++ ND   + R  
Sbjct: 3560 FSLSTAGVLSTTREIDREQIADFYLSVVTKDSGVPQMSSTGTVHITVIDQNDNPSQSR-- 3617

Query: 146  QYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSI 193
              E+F+ +    +L PG ++G V+  D D  D    SL      +FSI
Sbjct: 3618 TVEIFVNY--YGNLFPGGILGSVKPQDPDVLDSFHCSLTSGVTSLFSI 3663


>gi|301604928|ref|XP_002932104.1| PREDICTED: protocadherin Fat 4 [Xenopus (Silurana) tropicalis]
          Length = 3255

 Score = 71.6 bits (174), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 74/261 (28%), Positives = 115/261 (44%), Gaps = 38/261 (14%)

Query: 3   NEDD---FLQPITLV---VRAIQYDNQDRYALATLIVSKAG--TSLREL----------- 43
           ++DD   FL P+T V    RA+ Y+ Q  Y L        G  + +R             
Sbjct: 164 DDDDGIFFLNPVTGVFNVTRALDYELQQYYVLTVCAQDGGGQDSCVRVYFNILDVNDNPP 223

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWLSN-DYGERFSISRQGDISL 99
            FS+N YS S +ENLP    +LT       D    ++ Y +S+ D   +F +S+ G +S+
Sbjct: 224 VFSRNSYSASVMENLPPGSTILTFNVTDADDGFNSKLSYTISSGDSMGQFQVSKDGTLSV 283

Query: 100 MQCLDYETEDSYRFTVYATDTL------MTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
           +Q LD ET+  Y   V   D         T+S  V+I +++VND  P F  P+      +
Sbjct: 284 LQLLDRETQSFYSLVVQVHDMAPPPAPRYTSSVEVSIILLDVNDNPPSFISPKLTYVQEN 343

Query: 154 IPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIN-DSGHISIV-DLSALNT 209
            P       +V+ + +A D D G    +  SL G     FSI    G + +  +L   + 
Sbjct: 344 TPT-----DTVVFRAQATDPDSGPNSYIQYSLLGSLGNKFSIGIIDGEVRLTGELDREDI 398

Query: 210 STIQLVVVATDTGNPPRQASV 230
           S   L ++A D G P   +S+
Sbjct: 399 SNYTLTIIAKDKGEPSLSSSM 419



 Score = 65.9 bits (159), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 62/194 (31%), Positives = 97/194 (50%), Gaps = 19/194 (9%)

Query: 44  QFSKNEYSVSALENLPV--NYVLLTVTTNKPRDL--RVKYWL-SNDYGERFSISRQGDIS 98
           +F  + Y+VS  ENL      +L  V  +  + L  R+ Y L S +    F++S  G +S
Sbjct: 539 KFELSPYTVSVPENLETLPKIILQVVARDDDQGLNSRLTYSLASGNEDGAFTLSSSGQLS 598

Query: 99  LMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIP 155
           L++ LD E ++ Y   + ATD     +T + T++I V ++ND  P F    + + +P   
Sbjct: 599 LIKSLDREVKEWYSLLITATDAGFPALTGTGTISIQVEDINDNKPTFALNHHFITIPE-- 656

Query: 156 LADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDS-GHI---SIVDLSALNTST 211
             D   G+ I  V  +D D G    + L G     F+IN S G I   S++D  A +  T
Sbjct: 657 --DAPTGTDILMVNCSDSDAGQNGVIRLNGG-NSQFTINPSTGQIISSSLLDREAKDHYT 713

Query: 212 IQLVVVATDTGNPP 225
             L+V+ATD G+PP
Sbjct: 714 --LLVIATDGGSPP 725



 Score = 48.1 bits (113), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 46/143 (32%), Positives = 66/143 (46%), Gaps = 17/143 (11%)

Query: 95   GDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHI 154
            G I++ + L+ E  D Y   V A D+  T S  V I V +VND  PRF  P Y L  P  
Sbjct: 1105 GVITVSRPLNREDNDRYIVRVSAHDSGWTVSTDVTIFVTDVNDNAPRFSKPSYYLDYPET 1164

Query: 155  PLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIN-------DSGHISIVDLS 205
                L  GS + +V A D D+G    V   ++   E +F IN       +  H+   + S
Sbjct: 1165 ----LDIGSKVTQVFATDSDEGLNGHVYYFIKSQSE-LFRINSTTGEIFNKQHLKYQNPS 1219

Query: 206  A---LNTSTIQLVVVATDTGNPP 225
                +N +    +V A+D G+PP
Sbjct: 1220 VSGNININRHSFIVSASDRGSPP 1242



 Score = 47.8 bits (112), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 48/166 (28%), Positives = 77/166 (46%), Gaps = 14/166 (8%)

Query: 79   YWLSNDYGERFSISR-QGDISLMQCLDYETEDSYRFTVYATDTLM---TTSATVNISVVN 134
            Y  S ++G  F I    G + +   LD+ET   Y   V A D      ++   + I+V++
Sbjct: 882  YIASGNFGNTFHIDELNGQLYIKNPLDFETMPKYELWVEARDMGFPPFSSYEKLEITVLD 941

Query: 135  VNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMF 191
            VND  P+F+    + F+  I + +L+P  ++  + A D D G    +      G  E  F
Sbjct: 942  VNDNQPQFKQ---DPFIAEI-IENLSPRKIL-TISAEDKDSGSNGQVEYTIFDGNKEAFF 996

Query: 192  SIND-SGHI-SIVDLSALNTSTIQLVVVATDTGNPPRQASVPAIMH 235
            SIN  +G I +   L     S   L V A+D G+P R + V  I++
Sbjct: 997  SINRVNGEIRNTRQLDREKASQYTLSVKASDKGSPARSSIVKVIIY 1042



 Score = 46.2 bits (108), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 30/101 (29%), Positives = 46/101 (45%), Gaps = 5/101 (4%)

Query: 77  VKYWLSNDYGERFSIS-RQGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNV 135
           V Y + +   + F I    GD+   + LD E    Y   V A D L ++   +NI++ +V
Sbjct: 56  VTYTIISGADDSFRIDPESGDLIATKRLDRERRSKYSLLVRADDGLQSSDMRINITISDV 115

Query: 136 NDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG 176
           ND  P+F    Y   +      D  PGS++  + A D D G
Sbjct: 116 NDHIPKFSRAVYSFDVAE----DTIPGSIVAAILATDDDSG 152



 Score = 45.8 bits (107), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 43/137 (31%), Positives = 72/137 (52%), Gaps = 10/137 (7%)

Query: 95  GDISLMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFL 151
           G +S+ + LD E + SY   + A+D   +  + +ATV+I + ++ND  P+F    Y + +
Sbjct: 490 GVLSIARPLDRERKSSYTLKIQASDRGSSPRSDTATVSILLSDINDVVPKFELSPYTVSV 549

Query: 152 PHIPLADLTPGSVIGKVEAADGDKG--DRVTLSL-RGPYEKMFSINDSGHISIV-DLSAL 207
           P   L  L    +I +V A D D+G   R+T SL  G  +  F+++ SG +S++  L   
Sbjct: 550 PE-NLETLP--KIILQVVARDDDQGLNSRLTYSLASGNEDGAFTLSSSGQLSLIKSLDRE 606

Query: 208 NTSTIQLVVVATDTGNP 224
                 L++ ATD G P
Sbjct: 607 VKEWYSLLITATDAGFP 623



 Score = 45.4 bits (106), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 45/156 (28%), Positives = 71/156 (45%), Gaps = 10/156 (6%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGERFSIS-RQGDISLMQCL 103
           F+ N + ++  E+ P    +L V  +     +      N    +F+I+   G I     L
Sbjct: 645 FALNHHFITIPEDAPTGTDILMVNCSDSDAGQNGVIRLNGGNSQFTINPSTGQIISSSLL 704

Query: 104 DYETEDSYRFTVYATDTL---MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLT 160
           D E +D Y   V ATD     +T++  V +++ +VND  PRF +  Y   + HIP +  T
Sbjct: 705 DREAKDHYTLLVIATDGGSPPLTSTTNVTVNIRDVNDNPPRFLHHPY---VTHIP-SPTT 760

Query: 161 PGSVIGKVEAADGDKGDRVTL--SLRGPYEKMFSIN 194
            GS +  V   D D G    L  SL+G   + F I+
Sbjct: 761 AGSFVFAVTVTDEDIGSNAELHFSLKGRNSEKFHID 796



 Score = 45.1 bits (105), Expect = 0.056,   Method: Compositional matrix adjust.
 Identities = 51/192 (26%), Positives = 85/192 (44%), Gaps = 18/192 (9%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGERFSIS-RQGDISLM 100
            F  +EY  S +EN P    ++ +     +   +  + Y + +   + F I    G I+  
Sbjct: 1474 FKADEYFPSVMENAPSGTTVIRLNATDVDSAPNAVIAYSVQSSDSDLFVIDPNTGIITTQ 1533

Query: 101  QCLDYETEDSYRFTVYA---TDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLA 157
              LDYET+  Y  TV A    D    +  TV + +   N++ PRF    Y     +  ++
Sbjct: 1534 GFLDYETKQHYHLTVKAFNVPDEERCSFVTVTVQLEGANEYVPRFVSKLY-----YFEVS 1588

Query: 158  DLTP-GSVIGKVEAADGD---KGDRVTLSLRGPYEKMFSIN-DSGHISIVD-LSALNTST 211
            +  P G+V+G+V A+D D    GD   L      +K F I+  +G IS+   L       
Sbjct: 1589 EAAPKGTVVGEVFASDRDGGIDGDVHYLIFGSSRKKGFQIDKKTGKISVSGILDREKEER 1648

Query: 212  IQLVVVATDTGN 223
            I L ++A + G+
Sbjct: 1649 ISLKIIAKNVGS 1660



 Score = 43.1 bits (100), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 50/183 (27%), Positives = 86/183 (46%), Gaps = 16/183 (8%)

Query: 56  ENLPVNYVLLTVTTNKPR---DLRVKYWLSNDYGERFSISR-QGDISLMQCLDYETEDSY 111
           EN P + V+       P    +  ++Y L    G +FSI    G++ L   LD E   +Y
Sbjct: 342 ENTPTDTVVFRAQATDPDSGPNSYIQYSLLGSLGNKFSIGIIDGEVRLTGELDREDISNY 401

Query: 112 RFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKV 168
             T+ A D     +++S  +NI V+++ND  P F    +++    I  + LT G+ + ++
Sbjct: 402 TLTIIAKDKGEPSLSSSMDMNIIVLDINDNSPHFSQRHFKV---EISESTLT-GTDLIQL 457

Query: 169 EAADGDKGDRVTLS---LRGPYEKMFSIND-SGHISIVD-LSALNTSTIQLVVVATDTGN 223
            A+D D+G    +    + G     F I+  +G +SI   L     S+  L + A+D G+
Sbjct: 458 IASDADEGINGMVRYAIIDGNPSNEFRIDSVTGVLSIARPLDRERKSSYTLKIQASDRGS 517

Query: 224 PPR 226
            PR
Sbjct: 518 SPR 520


>gi|21711815|gb|AAM75098.1| SD07147p [Drosophila melanogaster]
          Length = 1533

 Score = 71.6 bits (174), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 65/194 (33%), Positives = 99/194 (51%), Gaps = 20/194 (10%)

Query: 55  LENLPVNYVLLTVTTNKPRDLRVKYWLS-NDYGERFSISR-QGDISLMQCLDYETEDSYR 112
           +E  PV  VL T+  N       ++ +S NDY   F+I++  G I  +  LDYE     +
Sbjct: 572 VEEQPVGTVLTTLQANDEDSSIGEFNISDNDY---FAINQTSGMIYTIARLDYEVVKEVK 628

Query: 113 FTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTP-GSVIGKV 168
           F V  +DT    +T +A V + ++N+ND DP+F    Y     +  + + +P G+V GKV
Sbjct: 629 FQVTVSDTGVPALTATADVVVDIINLNDNDPKFSQSDY-----YSNVTENSPRGTVAGKV 683

Query: 169 EAADGDKG--DRVTLSLRGPYEKMFSIND-SGHISIVDLSALNTSTIQ---LVVVATDTG 222
           EA DGD G    +T +L G   K FSI+  +G++ + + S L+   I+   L VVA D  
Sbjct: 684 EAHDGDVGVFGEITYTLIGENNKYFSIDAYTGNVMVANSSILDREQIKELTLSVVAQDKA 743

Query: 223 NPPRQASVPAIMHF 236
               Q S  A +H 
Sbjct: 744 PAAVQKSATATIHI 757



 Score = 47.4 bits (111), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 43/134 (32%), Positives = 64/134 (47%), Gaps = 23/134 (17%)

Query: 102 CLDYETEDSYRFTVYATDTLMTTSATV---NISVVNVNDWDPRFRYPQYELFLPHIPLAD 158
           CLDYE+E +Y  +  ATD     SA+V    ISV + ND  P    P Y         A 
Sbjct: 184 CLDYESETTYFLSYKATDDNGRGSASVVSLRISVTDANDSPPVCESPLYR--------AS 235

Query: 159 LTPGSVIGK----VEAADGDKGDRVTLSLRGP--YEKMFSIN-DSGHISI-----VDLSA 206
           +  G+V+      V+A D D   R++  +RG    E +F I+ ++G I I     +D++ 
Sbjct: 236 VDEGAVVFDSPLIVKARDADTMSRISYRIRGSEQVESIFDIDRETGQIIIRPNATLDVTN 295

Query: 207 LNTSTIQLVVVATD 220
           LN+  +   V A D
Sbjct: 296 LNSDQLIFAVEAND 309



 Score = 42.4 bits (98), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 35/122 (28%), Positives = 52/122 (42%), Gaps = 12/122 (9%)

Query: 109 DSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKV 168
           D   F V A D L T    VNI+V +VN+  P F    Y   +      +   G+ + +V
Sbjct: 299 DQLIFAVEANDGLFTAHCGVNITVRDVNNHMPNFEQQSYSAVVEE----NSEIGTSVERV 354

Query: 169 EAADGDKGDRVTLSLR---GPYEKMFSINDSGHISI---VDLSALNTSTIQLVVVATDTG 222
            A D D G    L  R   G ++    +  +G + +   +D    N  T QL + A+D G
Sbjct: 355 HATDLDTGKNAELRYRIQQGSFDDFGIVETTGEVFVSRKLDFDRRN--TYQLQIQASDQG 412

Query: 223 NP 224
            P
Sbjct: 413 TP 414



 Score = 40.8 bits (94), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 59/242 (24%), Positives = 90/242 (37%), Gaps = 44/242 (18%)

Query: 28   LATLIVSKAGTSLRELQFSKNEYSVSALEN----LPVNYVLLTVTTNKPRDLRVKYWLSN 83
            L ++ +  A  +  E   + N Y VS  EN    + + ++     +   RD+     L N
Sbjct: 974  LLSVSIVDANENRPEFPDASNPYKVSINENSGRDVKIGHIQAASRSKHNRDIFYYMLLGN 1033

Query: 84   DYGERFSISRQGDISLMQCLDYETEDSYRFTVYAT-----------------DTLM--TT 124
            + G  +     GDI   + LD E  D Y   + A+                  TL    T
Sbjct: 1034 EDGAFYVDKLTGDIYTNKSLDREETDVYTLYILASIKADLHISEEERASFSIKTLNRDNT 1093

Query: 125  SATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR 184
             A V I+V++VND  P F  P Y   +     A+   G+ I  V A D D+G    +   
Sbjct: 1094 VAKVAITVLDVNDNPPVFEKPIYYAGVN----ANAKMGAAITLVNATDADQGKNAKIEFM 1149

Query: 185  GPYEKM----------------FSINDSGHISIVDLSA-LNTSTIQLVVVATDTGNPPRQ 227
                 +                F+I+  G IS   + A  N    +L +VA +   P R 
Sbjct: 1150 IVASNLYKFGATKSTGSIVPSPFAISQDGRISANTIMAEYNQDRFELEIVARELEQPQRS 1209

Query: 228  AS 229
            AS
Sbjct: 1210 AS 1211



 Score = 38.9 bits (89), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 37/149 (24%), Positives = 68/149 (45%), Gaps = 13/149 (8%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGERFSI-SRQGDISLM 100
           F +  YS    EN  +   +  V     +  ++  ++Y +     + F I    G++ + 
Sbjct: 332 FEQQSYSAVVEENSEIGTSVERVHATDLDTGKNAELRYRIQQGSFDDFGIVETTGEVFVS 391

Query: 101 QCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL- 156
           + LD++  ++Y+  + A+D     +T +AT+ I+V N ND DP F  P  +    H  + 
Sbjct: 392 RKLDFDRRNTYQLQIQASDQGTPSLTGTATLTINVQNSNDKDPYF-VPATQ----HAEVR 446

Query: 157 ADLTPGSVIGKVEAADGDKGDRVTLSLRG 185
           AD  PG ++  + A D D  +   L   G
Sbjct: 447 ADAPPGQLVYTLIALDPDVANHNALEFAG 475


>gi|270006362|gb|EFA02810.1| dachsous [Tribolium castaneum]
          Length = 3474

 Score = 71.6 bits (174), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 53/141 (37%), Positives = 72/141 (51%), Gaps = 13/141 (9%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWL--SNDYGERFSI-SRQGDIS 98
            F +NEYS S  E+ PVN  +L VT    +   + R+ Y L   N+ GE F I    G + 
Sbjct: 1027 FERNEYSKSVEESRPVNSQILQVTAVDLDTGNNARLTYRLLPGNNTGEVFGIFPNSGWLY 1086

Query: 99   LMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIP 155
            L   LD ET+D Y  TV ATD     ++ +A V + V + ND DP+F    YE  +    
Sbjct: 1087 LKGSLDRETKDRYELTVTATDNGTPSLSATAKVLVKVSDANDNDPKFMKESYEFSIEE-- 1144

Query: 156  LADLTPGSVIGKVEAADGDKG 176
              +L  GS +GK+ A D D G
Sbjct: 1145 --NLRSGSPVGKLSATDEDIG 1163



 Score = 58.2 bits (139), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 59/201 (29%), Positives = 95/201 (47%), Gaps = 21/201 (10%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTTNKPR---DLRVKYWLSNDYGERFSI-SRQGDISL 99
            +F  ++YS +  E++ ++  ++ V  +      + R+ Y L+N+    F I ++ G I+ 
Sbjct: 1992 KFDLSKYSTTIPEDISIDTSIIKVHASDADMSVNARIIYSLANESQWLFRIDNKTGVITT 2051

Query: 100  MQCLDYETEDSYRFTVYATDT----LMTTSATVNISVVNVNDWDPRF-RYPQYELFLPHI 154
                D E +  Y F V ATD+      +    V + + ++ND  P F +YP  E    + 
Sbjct: 2052 AGLFDRELQSVYNFLVVATDSGKYNARSQRVPVTVRIEDINDNKPIFTQYPFREQVAAY- 2110

Query: 155  PLADLTPGSVIGKVEAADGDKG--DRVTLSL--RGPYEKMFSINDSGHI--SIVDLSALN 208
                  PG  I K+ A D D G    +  SL   G Y K F IN +  I  +   L+A N
Sbjct: 2111 ----KQPGQTILKITAKDADFGTNSEIVYSLVNDGSYPK-FRINPNTGILTATQSLAAEN 2165

Query: 209  TSTIQLVVVATDTGNPPRQAS 229
               I L V+ATD GNPP+ ++
Sbjct: 2166 GRVIHLNVIATDKGNPPQSST 2186



 Score = 46.2 bits (108), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 30/74 (40%), Positives = 42/74 (56%), Gaps = 5/74 (6%)

Query: 77  VKYWLSNDYGE--RFSI-SRQGDISLMQCLDYETEDSYRFTVYATDT-LMTTSATVNISV 132
           V Y L   +G+   F + S  G++ +   LDYET + Y F V ATD   ++T+A V I V
Sbjct: 638 VNYTLGEGFGKLKEFEVRSATGEVCITSSLDYETRNVYEFPVVATDRGGLSTTAMVKIQV 697

Query: 133 VNVNDWDPRFRYPQ 146
            +VND  P F YP+
Sbjct: 698 TDVNDNRPVF-YPR 710



 Score = 45.4 bits (106), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 37/111 (33%), Positives = 58/111 (52%), Gaps = 9/111 (8%)

Query: 44   QFSKNEYSVSALE-NLPVNYVLLTVT--TNKPRDLRVKY-WLSNDYGERFSISRQ--GDI 97
            +F++ +YS S  E N    +VL  V    ++  + R++Y +L  ++   F I  +  G +
Sbjct: 2310 KFTQQQYSASVWEGNKKGAFVLQVVAFDDDEGHNSRIRYHFLDGNHDNAFKIEPEFSGIL 2369

Query: 98   SLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYP 145
                 LD E  D+Y+ TV ATD     MT +A + I+VV+VND  P F  P
Sbjct: 2370 KTNIVLDREIRDNYKLTVIATDEGVPQMTGTARIVINVVDVNDNQPTFPPP 2420



 Score = 41.6 bits (96), Expect = 0.73,   Method: Compositional matrix adjust.
 Identities = 50/171 (29%), Positives = 77/171 (45%), Gaps = 24/171 (14%)

Query: 77   VKYWLSNDY--GERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDTLM------TTSAT 127
            V+Y L + Y   + F+I +  G + L   LDYET   Y   + ATD  +      ++S T
Sbjct: 1603 VRYHLLHQYPTNDTFTIDTLTGTLILSNSLDYETVQEYTIIISATDQSLNISERRSSSIT 1662

Query: 128  VNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIG----KVEAADGDKGD--RVTL 181
              + + + ND  P+F        +P  P A ++  S IG     + A D D GD  RVT 
Sbjct: 1663 ARVIITDSNDNPPKF-------VIPVPPTAFISESSSIGMKITHLVAVDSDSGDNGRVTY 1715

Query: 182  SLRGPYE-KMFSIN-DSGHISIVDLSALNTSTIQLVVVATDTGNPPRQASV 230
             +    E  +F++  D+G +++         T  L V ATD G P   A +
Sbjct: 1716 VISSGNEGSLFALGYDTGVLTLAKPLPDAQRTYVLNVTATDHGTPTLHADM 1766



 Score = 41.2 bits (95), Expect = 0.90,   Method: Compositional matrix adjust.
 Identities = 37/134 (27%), Positives = 66/134 (49%), Gaps = 15/134 (11%)

Query: 46   SKNEYSVSALENLPVNYVLLTVTTNKPRDLRVK---YWLSNDYGERFSISR-QGDISLMQ 101
            +K +Y +   E+ P   ++L +   KP +++ +   Y +  +    F +S   G + +++
Sbjct: 2583 NKKDYKIQIPESTPKGTIVLHL--GKPPNVQKQASFYIVDGNEEGAFEVSSPTGALIVVK 2640

Query: 102  CLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTP 161
             LD E  DSY   +   D+ +     V+I +V+ ND  P F+   YE       +++ TP
Sbjct: 2641 TLDREHRDSYSLKITIGDSAVIA---VSIIIVDTNDNAPVFKQSDYE-----TTISEGTP 2692

Query: 162  -GSVIGKVEAADGD 174
             G+ I K EA DGD
Sbjct: 2693 VGTSIKKFEATDGD 2706



 Score = 41.2 bits (95), Expect = 0.92,   Method: Compositional matrix adjust.
 Identities = 54/217 (24%), Positives = 90/217 (41%), Gaps = 31/217 (14%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLR----VKYWLSND--YGERFSIS-RQGD 96
            +F  N   +S  EN+     L      + RD      V+Y + N+   G  F++  + G 
Sbjct: 920  EFESNVVRISVPENVETGIALYAAHA-RDRDSGANGVVRYKIVNNGATGGLFNVDPKLGH 978

Query: 97   ISLMQCLDYETEDSYRFTVYATDTL---MTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
            ++L + LDYET   +   + ATDT    ++ + TV + V +VND  P F   +Y   +  
Sbjct: 979  LTLTRHLDYETTQRHSLIITATDTGIPPLSANLTVLVEVQDVNDNPPVFERNEYSKSVEE 1038

Query: 154  IPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSGHISIV----------- 202
                +    S I +V A D D G+   L+ R     +   N++G +  +           
Sbjct: 1039 SRPVN----SQILQVTAVDLDTGNNARLTYR-----LLPGNNTGEVFGIFPNSGWLYLKG 1089

Query: 203  DLSALNTSTIQLVVVATDTGNPPRQASVPAIMHFPEA 239
             L        +L V ATD G P   A+   ++   +A
Sbjct: 1090 SLDRETKDRYELTVTATDNGTPSLSATAKVLVKVSDA 1126



 Score = 40.8 bits (94), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 41/174 (23%), Positives = 72/174 (41%), Gaps = 25/174 (14%)

Query: 70   NKPRDLRVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSA 126
            N+  D  +KY +S  +     +  Q +I+  + LD E +++Y     A D      ++  
Sbjct: 1268 NRKLDNLLKY-VSIQFTNLIRLRAQCEITAKEPLDRERKETYDLVAEARDQGTPSRSSRV 1326

Query: 127  TVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGP 186
             V I V++VND  P    PQ ++        +  PG+ + +V A D D G   +++    
Sbjct: 1327 AVKIHVLDVNDNVPEIIDPQEDVVSVR---EEQPPGTEVVRVRAVDSDNGQNASITY--- 1380

Query: 187  YEKMFSINDSGHISIVDLSAL-------------NTSTIQLVVVATDTGNPPRQ 227
               +    DS    +  +  L               +  +L VVA+D G PP+Q
Sbjct: 1381 --SLLKRQDSDGYGVFKIDPLTGVIRTRMMLDHEEKTIYRLAVVASDAGKPPKQ 1432



 Score = 40.0 bits (92), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 41/142 (28%), Positives = 68/142 (47%), Gaps = 14/142 (9%)

Query: 103 LDYETEDSYRFTVYATDTL---MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADL 159
           LD E + +Y   V ATD     +  S T+N+ V ++ND  P F    Y+  +  + ++D 
Sbjct: 401 LDRELQPNYTLDVVATDRGNPPLHASRTINLMVTDINDNAPEFDQEVYQANV--MEVSD- 457

Query: 160 TPGSVIGKVEAADGDKGDRVTLSLR-----GPYEKMFSIN-DSGHISIVDLSALNTSTI- 212
            PG+ + +V A D D+G+   +S         +   F I+  SG ++        T  + 
Sbjct: 458 -PGTSVIQVLATDKDEGNNSAISYSLLDTVETHSSWFQIDPRSGLVTTRAHVDCETDPVP 516

Query: 213 QLVVVATDTGNPPRQASVPAIM 234
           +L VVATD G PP  +S   ++
Sbjct: 517 RLTVVATDNGFPPLSSSATVLV 538



 Score = 39.7 bits (91), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 60/237 (25%), Positives = 96/237 (40%), Gaps = 19/237 (8%)

Query: 13   LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLP----VNYVLLTVT 68
            L + A    N    A A + +S   ++ R   F    Y+ S  E++     V  V  TV 
Sbjct: 785  LNISATDGGNLKSLADAEVFISVIDSAQRPPIFEHPRYTYSVKEDVRKETIVGNVKATVR 844

Query: 69   TNKPRDLRVKYWL-SNDYGERFSIS-RQGDISLMQCLDYETEDSYRFTVYAT--DTLMTT 124
             +  R   ++Y + S D    F I    G I     LD+E   S    + AT  D  +  
Sbjct: 845  DSGDRK-NIRYSIYSGDPEGFFRIDPSTGAIRTASALDHELRSSVLLNIQATNGDPPVYG 903

Query: 125  SATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGD----RVT 180
               VNI + +VND  P F      + +P     ++  G  +    A D D G     R  
Sbjct: 904  HTQVNIEIQDVNDNAPEFESNVVRISVPE----NVETGIALYAAHARDRDSGANGVVRYK 959

Query: 181  LSLRGPYEKMFSINDS-GHISIV-DLSALNTSTIQLVVVATDTGNPPRQASVPAIMH 235
            +   G    +F+++   GH+++   L    T    L++ ATDTG PP  A++  ++ 
Sbjct: 960  IVNNGATGGLFNVDPKLGHLTLTRHLDYETTQRHSLIITATDTGIPPLSANLTVLVE 1016



 Score = 39.3 bits (90), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 56/207 (27%), Positives = 94/207 (45%), Gaps = 27/207 (13%)

Query: 45  FSKNEYSVSALENLPVNYVLLTV-TTNKP--RDLRVKYWLSNDYGERFSISR----QGDI 97
           F+++ Y  +  EN  V   +L V  T+K    + +++Y ++    +R ++ R     G I
Sbjct: 225 FNQSRYIATVPENATVGTTVLQVFATDKDSGENGQIEYSINRRQSDRDNMFRIDPTTGLI 284

Query: 98  SLMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFL--- 151
            + + LD+ET++ +   + A D     + T+A V+I V +VND  P        +FL   
Sbjct: 285 VVNKPLDFETKELHELVIVAKDHGLQPLETTAFVSIRVTDVNDNQPTINV----IFLSDD 340

Query: 152 --PHIPLADLTPGSVIGKVEAADGDKGDR-----VTLSLRGPYEKMFSINDSGHISIVDL 204
             P I  +   PG  + ++   D D         VTLS    +  + + ++  ++ IV L
Sbjct: 341 ATPKISES-AQPGEFVARISVNDPDSKTEYSNINVTLSGGDGHFGLTTRDNIIYLVIVSL 399

Query: 205 SALN--TSTIQLVVVATDTGNPPRQAS 229
                      L VVATD GNPP  AS
Sbjct: 400 PLDRELQPNYTLDVVATDRGNPPLHAS 426



 Score = 38.5 bits (88), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 42/144 (29%), Positives = 63/144 (43%), Gaps = 15/144 (10%)

Query: 97   ISLMQCLDYETEDSYRFTVYATDT-----LMTTSATVNISVVNVNDWDPRFRYPQ-YELF 150
            I+  + LD ET+ +Y   +Y  D+      +   AT+ I V +VND  P F+    Y L+
Sbjct: 1839 ITTSKYLDRETKSTYTLPIYVIDSTTPGKTLFDVATITIEVTDVNDNAPEFKINSCYRLY 1898

Query: 151  LPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPY--EKMFSINDSGHISIVDLSA 206
            +P     D+   +VI  V A D D G    +T S+ G     K    N +G ++   L  
Sbjct: 1899 VPE--NNDI---AVIHTVVAKDLDVGLNGEITYSINGGNVGNKFIIDNRTGALTAKPLDR 1953

Query: 207  LNTSTIQLVVVATDTGNPPRQASV 230
             + S   L + A D G P    S 
Sbjct: 1954 ESHSRYYLTITAQDRGKPSMMGSC 1977



 Score = 38.1 bits (87), Expect = 7.7,   Method: Compositional matrix adjust.
 Identities = 40/118 (33%), Positives = 53/118 (44%), Gaps = 7/118 (5%)

Query: 116  YATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDK 175
            +A D         +I   NVND  P F    Y+  LP     +L   S I  V   D D 
Sbjct: 2453 FAKDNAREDLEFFSIDRFNVNDNAPVFSQLVYQANLPEGHSTEL---SEILTVNTTDSDS 2509

Query: 176  GD--RVTLSLRGPYEKMFSINDSGHISIVDLSALNTST-IQLVVVATDTGNPPRQASV 230
            GD  RV   L  P    F+I  +  I   +LS ++T+  +QL V ATD G PP ++ V
Sbjct: 2510 GDNARVEYFLLNPIPS-FAIGRTDGILRANLSNISTTQDVQLYVQATDLGKPPLKSVV 2566



 Score = 38.1 bits (87), Expect = 7.9,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 49/102 (48%), Gaps = 4/102 (3%)

Query: 77   VKYWLSNDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDTLMTTS-ATVNISVVN 134
            V Y  ++D    F+I S  G ++     DYE +  Y F V ATD    +S   V + + +
Sbjct: 2830 VNYPGTDDSWRLFNIDSSTGMVTTNVIFDYEQQSRYVFIVRATDVGGKSSNVKVRVEIES 2889

Query: 135  VNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG 176
             +++ P+F    Y+  L    +  L  G V+G V A D DKG
Sbjct: 2890 KDEFHPQFTERTYKFVLATSVV--LPVGYVVGHVIATDRDKG 2929


>gi|340708971|ref|XP_003393090.1| PREDICTED: cadherin-related tumor suppressor-like [Bombus terrestris]
          Length = 5085

 Score = 71.6 bits (174), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 59/206 (28%), Positives = 100/206 (48%), Gaps = 15/206 (7%)

Query: 44   QFSKNEYSVSALENLPVN-YVLLTVTTNKPRDL--RVKYWLSNDYGERFSISRQ-GDISL 99
            +F++ EY  +  ENL    +V     T+K   L  +++Y L  +  ERF++  + G++  
Sbjct: 2455 EFTRQEYRATVTENLASGTWVTKPHATDKDEGLNAKIRYSLLGENSERFTVEPETGEVLT 2514

Query: 100  MQCLDYETEDSYRFTVYATDTLMT----TSATVNISVVNVNDWDPRFRYPQYELFLPHIP 155
            +  LD E    Y  T+ A D+  T    ++  + I V +VND  PRF  P+Y  ++P   
Sbjct: 2515 VVPLDREQTAVYHLTLVAQDSSPTEPQASAVNLTIFVKDVNDNAPRFSSPRYTAYVP--- 2571

Query: 156  LADLTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSIN-DSGHISIVDLSALNTSTI 212
                 PG  +   +A D D G+  R+   L+G   + F I+ +SG I      A + +T 
Sbjct: 2572 -GATKPGDFVFGAKAVDDDDGENSRIVYRLQGIDAEKFVIDPNSGVIRTTQELANDETTY 2630

Query: 213  QLVVVATDTGNPPRQASVPAIMHFPE 238
            QL + A+D G  P+  +   ++H  E
Sbjct: 2631 QLQIQASDCGVKPQTVTADLVIHLWE 2656



 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 68/228 (29%), Positives = 110/228 (48%), Gaps = 19/228 (8%)

Query: 11  ITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVT-- 68
           I L V A       +YA   L V+    +    +FS+N   V+  EN P   ++ T+T  
Sbjct: 577 IELHVSARDGGPNPKYASTHLKVTILDENDEAPRFSQNVVRVTLSENTPPQSLVATLTAV 636

Query: 69  -----TNKPRDLRVKYWLSNDYGERFSISR-QGDISLMQCLDYETEDSYRFTVYATDT-- 120
                TN          +S DY + F++    G ++    LD ET   Y+  V A D   
Sbjct: 637 DNDQGTNGSVAYSFHSSVSRDYPKTFALDGLTGQLTTKVNLDRETTAEYQILVIAKDQGT 696

Query: 121 -LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGD-- 177
              +++ATV +++ +VND  P F YP +   +P IP  D  PG+ +GKV A D D  +  
Sbjct: 697 PPQSSTATVILTLEDVNDNSPVF-YP-WRYLMP-IP-EDAPPGTSVGKVTATDADARENA 752

Query: 178 RVTLSLRGPYEKMFSIND-SGHISIV-DLSALNTSTIQLVVVATDTGN 223
           +V  SL    E +F++++ +G I++   L A + +  +L + A DTG+
Sbjct: 753 QVRYSLESGGEGLFTVDERTGEITLQGSLRAAHKTLYELNISAKDTGD 800



 Score = 58.5 bits (140), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 63/210 (30%), Positives = 91/210 (43%), Gaps = 22/210 (10%)

Query: 30   TLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRD-----LRVKYWLSND 84
            TL++S  G +     F+   + V   EN PVN  +LTV+     D     +R K    N+
Sbjct: 3178 TLVIS--GENKHAPTFAAVSHQVRVPENEPVNTTILTVSATDGDDGPNGMIRYKISAGNE 3235

Query: 85   YGERFSISRQGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNV---NDWDPR 141
              E F  S  G +++++ LDY+    Y+  + ATD        V I  VNV   ND  P 
Sbjct: 3236 KNEFFVHSITGAVTILEPLDYDLVQEYKLNITATDLGFEPKQAVAILTVNVSDINDNPPT 3295

Query: 142  FRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSI-NDSG 197
            F    YE +LP     +  P S + KV A D D      +    L G  +  F I  D+G
Sbjct: 3296 FNQSIYEAYLPE----NSPPDSFVYKVIARDIDSPKYAVIQYKILGGTGKDHFRIREDTG 3351

Query: 198  HISIV---DLSALNTSTIQLVVVATDTGNP 224
             I+ +   D    N  T+ +V    D+ NP
Sbjct: 3352 EIASLISFDYEEANEYTLDIVAANPDS-NP 3380



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 51/167 (30%), Positives = 82/167 (49%), Gaps = 12/167 (7%)

Query: 72   PRDLRVKYWLSNDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSAT 127
            P + +V+Y+L     + F I +  GDI L++ LD E    Y  T+ A DT    +T S  
Sbjct: 2382 PYNDQVRYFLKEGDTDLFRINASTGDIFLLRPLDRELVAEYTLTLVAMDTGSPPLTGSGI 2441

Query: 128  VNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRG 185
            V I V++VND  P F   +Y   +      +L  G+ + K  A D D+G   ++  SL G
Sbjct: 2442 VRIVVLDVNDHIPEFTRQEYRATV----TENLASGTWVTKPHATDKDEGLNAKIRYSLLG 2497

Query: 186  PYEKMFSIN-DSGHI-SIVDLSALNTSTIQLVVVATDTGNPPRQASV 230
               + F++  ++G + ++V L    T+   L +VA D+     QAS 
Sbjct: 2498 ENSERFTVEPETGEVLTVVPLDREQTAVYHLTLVAQDSSPTEPQASA 2544



 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 51/198 (25%), Positives = 95/198 (47%), Gaps = 22/198 (11%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTTNK---PRDLRVKYWLSNDYGERFSI-SRQGDISL 99
            QF++  +SV+  EN  +   ++ +T++     ++  V Y  + + GE+F++ +  G++++
Sbjct: 2872 QFTR-LFSVNVTENAEIGTFVIRITSSDLDIGQNANVTYRFTENPGEKFAMDALSGNVTV 2930

Query: 100  MQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADL 159
               LD E +D Y   + A D     +  + I++ + ND  P F    Y    P +     
Sbjct: 2931 NGHLDREEQDEYLLKLVAADGAWQAATALTITIQDQNDNPPEFDEESYHFHFPEL----Q 2986

Query: 160  TPGSVIGKVEAADGDK---GDRVTLSLRGPYEKMFSINDS-GHI-SIVDLSALNT----- 209
             P + +G+V A D DK      ++ SL  P + +F+++ + G + S   L   +T     
Sbjct: 2987 PPVAHVGQVTAIDRDKQGPNSVISYSLLQPSD-LFTVDPATGDVFSKKTLKYKHTHRPSS 3045

Query: 210  --STIQLVVVATDTGNPP 225
              +   L VVATD G PP
Sbjct: 3046 PENLYSLTVVATDNGKPP 3063



 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 46/143 (32%), Positives = 68/143 (47%), Gaps = 12/143 (8%)

Query: 95   GDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHI 154
            G ++L + LD ET + Y   V A D L  T   + I V + ND  P F+   Y   +P  
Sbjct: 1878 GQLTLAEALDRETREKYVLKVRADDGLQHTDIALTIQVTDTNDNAPTFQSTAYSFDVPE- 1936

Query: 155  PLADLTPGSVIGKVEAADGD-KGDRVTLS---LRGPYEKMFSINDSGHISIVDLSALNTS 210
               ++  GS IG+V A D D  G    LS   +      +FS+N S  +  +  ++L+  
Sbjct: 1937 ---NVPRGSRIGQVVATDADANGPNSQLSYTLISDWANDVFSLNPSTGVFTL-TASLDYE 1992

Query: 211  TIQ---LVVVATDTGNPPRQASV 230
             +Q   LVV ATD G P   ++V
Sbjct: 1993 QVQHYILVVQATDGGIPALSSTV 2015



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 57/238 (23%), Positives = 105/238 (44%), Gaps = 20/238 (8%)

Query: 13  LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVT-TNK 71
           L V A       R A A L++     +  E  F ++EYS    E  P    + +++ T+ 
Sbjct: 474 LTVVATDKGTPPRSATAYLVIHVNDVNDHEPVFQQSEYSAVLSELSPTGSFVASISATDA 533

Query: 72  PRDLRVKYWLSNDYGER---FSISRQ-GDISLMQCLDYETEDSYRFTVYATD---TLMTT 124
              L  + +   D G     F+I +  G ++ +  LD E + S    V A D        
Sbjct: 534 DSGLNARIYYDFDSGNEQGWFAIDQDTGLVTTVATLDREVQGSIELHVSARDGGPNPKYA 593

Query: 125 SATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTL--- 181
           S  + +++++ ND  PRF      + L      +  P S++  + A D D+G   ++   
Sbjct: 594 STHLKVTILDENDEAPRFSQNVVRVTLSE----NTPPQSLVATLTAVDNDQGTNGSVAYS 649

Query: 182 ---SLRGPYEKMFSIND-SGHISI-VDLSALNTSTIQLVVVATDTGNPPRQASVPAIM 234
              S+   Y K F+++  +G ++  V+L    T+  Q++V+A D G PP+ ++   I+
Sbjct: 650 FHSSVSRDYPKTFALDGLTGQLTTKVNLDRETTAEYQILVIAKDQGTPPQSSTATVIL 707



 Score = 45.4 bits (106), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 41/109 (37%), Positives = 55/109 (50%), Gaps = 11/109 (10%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTV-TTNKPRDLRVKYWLS----NDYGERFSISRQ-GDI 97
            QF +  Y V   E   +   LL V TT+    L    + S    N +G RF+I    G I
Sbjct: 1248 QFQRLPYRVQVNEGAAIGTQLLRVYTTDADEGLNGDVFYSLEDGNQHG-RFAIDEATGQI 1306

Query: 98   SLMQCLDYETEDSYRFTVYATD----TLMTTSATVNISVVNVNDWDPRF 142
            SL + LD ET D+Y  TV A D    T +++S TV+I V++ ND  P F
Sbjct: 1307 SLTKELDRETTDAYVLTVVAHDAGLETRLSSSTTVHIEVLDENDNVPLF 1355



 Score = 44.7 bits (104), Expect = 0.072,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 61/138 (44%), Gaps = 6/138 (4%)

Query: 95   GDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHI 154
            G IS   CLD E    Y   + A   L     +VNI+V+++ND  PRF  P+ E+    +
Sbjct: 883  GTISTSGCLDREQVAYYSLQLSARAGLAYGQTSVNITVLDINDNPPRF--PKGEIGDEVL 940

Query: 155  PLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDSGHISIVD--LSALNTS 210
               +   G  +    A D D     R+  SL       F + ++  I  +D  + A   +
Sbjct: 941  LKENAAVGQEVCLARARDRDASANARIVYSLTHNPGGQFRVAENSGIIYLDKPIRAAPGT 1000

Query: 211  TIQLVVVATDTGNPPRQA 228
             + L V ATD+GN P  A
Sbjct: 1001 VLHLEVTATDSGNQPLSA 1018



 Score = 44.7 bits (104), Expect = 0.075,   Method: Compositional matrix adjust.
 Identities = 57/223 (25%), Positives = 100/223 (44%), Gaps = 37/223 (16%)

Query: 45  FSKNEYSVSALENLPVNYVLLTV-TTNKPRD--LRVKYWLSNDYGERFSISRQ-GDISLM 100
           F +++Y V+  E+ PV   +LTV  T+K  +   ++ Y+L  D   +F+I  + G I+ +
Sbjct: 278 FQQSDYVVALNESAPVGTKVLTVHATDKDSEDNSKLTYYLP-DTERQFTIDPETGTITTV 336

Query: 101 QCLDYETED-------------SYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRY 144
           + LD   +              S   TV+A D           V +++++ ND DP  ++
Sbjct: 337 EPLDCPQQSCTIAARLGDGCPKSCVITVFARDHGSPRQDGRTYVTVNLLDANDHDPEIKF 396

Query: 145 PQYELFLPHIPL-----ADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYE-KMFSINDS 196
                + P  P       +    S++  V   D D+G     T+ +R   E   F ++++
Sbjct: 397 S----YFPSTPGFATVDENAAKDSIVAAVAVIDNDEGLNGETTVEIRAGNELGHFRLDNT 452

Query: 197 GHISIVDLSA-LNTSTI---QLVVVATDTGNPPRQASVPAIMH 235
               IV ++  L+   I    L VVATD G PPR A+   ++H
Sbjct: 453 PSFDIVRVNGRLDREEIPKYNLTVVATDKGTPPRSATAYLVIH 495



 Score = 44.7 bits (104), Expect = 0.082,   Method: Compositional matrix adjust.
 Identities = 50/187 (26%), Positives = 80/187 (42%), Gaps = 29/187 (15%)

Query: 76   RVKYWLSNDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNIS 131
            +V Y+L ND+ E F I S  G+IS    LD E   SY   V A D     +T +ATV ++
Sbjct: 2803 QVSYYLVNDFTETFVIDSDTGEISTNAKLDREEIASYELIVEARDQGQPSLTGTATVLLT 2862

Query: 132  VVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR---GPYE 188
            V++ ND  P+F      LF  ++   +   G+ + ++ ++D D G    ++ R    P E
Sbjct: 2863 VLDKNDNPPQFT----RLFSVNV-TENAEIGTFVIRITSSDLDIGQNANVTYRFTENPGE 2917

Query: 189  KMF------SINDSGHIS-----------IVDLSALNTSTIQLVVVATDTGNPPRQASVP 231
            K        ++  +GH+            +    A   +T   + +     NPP      
Sbjct: 2918 KFAMDALSGNVTVNGHLDREEQDEYLLKLVAADGAWQAATALTITIQDQNDNPPEFDEES 2977

Query: 232  AIMHFPE 238
               HFPE
Sbjct: 2978 YHFHFPE 2984



 Score = 42.4 bits (98), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 42/182 (23%), Positives = 83/182 (45%), Gaps = 15/182 (8%)

Query: 6    DFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVN---Y 62
            D +Q   L + A     + + A+A L V+ +  +     F+++ Y     EN P +   Y
Sbjct: 3257 DLVQEYKLNITATDLGFEPKQAVAILTVNVSDINDNPPTFNQSIYEAYLPENSPPDSFVY 3316

Query: 63   VLLTVTTNKPRDLRVKYWLSNDYG-ERFSISRQ-GDISLMQCLDYETEDSYRFTVYA--- 117
             ++    + P+   ++Y +    G + F I    G+I+ +   DYE  + Y   + A   
Sbjct: 3317 KVIARDIDSPKYAVIQYKILGGTGKDHFRIREDTGEIASLISFDYEEANEYTLDIVAANP 3376

Query: 118  -TDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTP-GSVIGKVEAADGDK 175
             ++  M    TV + +  VN++ P+F  P +     H+ +++    G+ +G V+A D D 
Sbjct: 3377 DSNPQMVGFTTVLVHITGVNEYYPKFIQPVF-----HMDVSESAEVGTSVGLVQATDQDA 3431

Query: 176  GD 177
            G+
Sbjct: 3432 GE 3433



 Score = 42.0 bits (97), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 44/136 (32%), Positives = 66/136 (48%), Gaps = 14/136 (10%)

Query: 103 LDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADL 159
           LD E    Y  TV ATD      + +A + I V +VND +P F+  +Y        L++L
Sbjct: 464 LDREEIPKYNLTVVATDKGTPPRSATAYLVIHVNDVNDHEPVFQQSEYSAV-----LSEL 518

Query: 160 TP-GSVIGKVEAADGDKG--DRVTLSL-RGPYEKMFSIN-DSGHISIV-DLSALNTSTIQ 213
           +P GS +  + A D D G   R+      G  +  F+I+ D+G ++ V  L      +I+
Sbjct: 519 SPTGSFVASISATDADSGLNARIYYDFDSGNEQGWFAIDQDTGLVTTVATLDREVQGSIE 578

Query: 214 LVVVATDTGNPPRQAS 229
           L V A D G  P+ AS
Sbjct: 579 LHVSARDGGPNPKYAS 594



 Score = 41.6 bits (96), Expect = 0.66,   Method: Compositional matrix adjust.
 Identities = 52/205 (25%), Positives = 86/205 (41%), Gaps = 32/205 (15%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSN-DYGERFSISRQGDISLM 100
            F    ++   +EN  +   +L+V     +   + RV Y ++  D    F ++  G +   
Sbjct: 2031 FEAGPHAADIVENTTIGTPILSVAAQDLDSGDNGRVIYAVAGGDENGDFGVAPNGTLFTR 2090

Query: 101  QCLDYETEDSYRFTVYATDT----LMTTSATVNISVV--NVNDWDPRFRYPQYELFLPHI 154
            + LD E +  Y   + ATD+     +  S+TV ++VV  +VND  P F  P     + + 
Sbjct: 2091 KLLDREQKPLYNLILSATDSPLPPALPLSSTVQVTVVLLDVNDMSPEFISPTKISIIENA 2150

Query: 155  PLADLTPGSVIGKVEAADGDKGDR--VTLSLR--------GPYEKMFSINDSGHISIVDL 204
            P       +V+  ++A D D+G    V  SL         GP + +  ++ S       L
Sbjct: 2151 P-----SNTVVMAIKAVDRDEGRNGYVEYSLEDTTLPFTVGPVDGLLRVSGS-------L 2198

Query: 205  SALNTSTIQLVVVATDTGNPPRQAS 229
                 S   L V A D G PPR +S
Sbjct: 2199 DRELRSNYTLEVTAKDRGEPPRSSS 2223



 Score = 39.7 bits (91), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 27/81 (33%), Positives = 44/81 (54%), Gaps = 5/81 (6%)

Query: 71   KPRDLRVKY-WLSNDYGERFSISRQ-GDISLMQCLDYETEDSYRFTVYATDT---LMTTS 125
            KP++ +  Y  +S + G+ F +  Q GDI   + LD ET   Y  T+ A DT     T +
Sbjct: 3538 KPQNNQFSYSIISGNLGQAFKVDPQTGDIETAKQLDRETIPIYDLTIGAIDTGSPPQTGT 3597

Query: 126  ATVNISVVNVNDWDPRFRYPQ 146
            A ++I ++++ND  P F  P+
Sbjct: 3598 AAIHIELLDINDNGPTFDPPE 3618


>gi|195032868|ref|XP_001988576.1| GH10500 [Drosophila grimshawi]
 gi|193904576|gb|EDW03443.1| GH10500 [Drosophila grimshawi]
          Length = 3594

 Score = 71.6 bits (174), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 74/225 (32%), Positives = 114/225 (50%), Gaps = 32/225 (14%)

Query: 42   ELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDL----RVKYWLSNDYGERFSI-SRQGD 96
            E +F   +Y  S  EN  +   +L +  +   DL    R+ Y L+N+   +F+I S+ G 
Sbjct: 1955 EPRFELAKYMASVAENAAIGSSVLRIKASDA-DLGVNSRLVYSLANETQWQFAIDSKSGL 2013

Query: 97   ISLMQCLDYETEDSYRFTVYATDT----LMTTSATVNISVVNVNDWDPRF-RYPQYELFL 151
            I+ +  LD E + SY F V ATD     + + S  V I+V+++ND  P F RYP Y   +
Sbjct: 2014 ITTVGKLDRELQSSYSFMVLATDCGRYEVRSGSVAVQINVLDINDNKPIFERYP-YSGQV 2072

Query: 152  PHIPLADLTPGSVIGKVEAADGDKGD--RVTLSLR-------GPYEKMFSIN-DSGHISI 201
            P +    + PG  + KV+A D D+G    V  +L+             F IN ++G +S 
Sbjct: 2073 PAL----IQPGQTLLKVQAHDADQGSNGEVLYALKADSLLGSAAIRSKFRINPNTGALSA 2128

Query: 202  VD-LSALNTSTIQLVVVATDTGNPPRQASVPAIMHFPEAIVQQAS 245
               L++   + +QL V+A D GNPP Q+SV  I    E +V +AS
Sbjct: 2129 TQSLASETGNLLQLEVIARDKGNPP-QSSVGLI----ELMVGEAS 2168



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 65/211 (30%), Positives = 103/211 (48%), Gaps = 19/211 (9%)

Query: 29  ATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGER 88
           AT++V+    +  E  F ++ Y+VS  EN PV   +L V+ + P D  V   ++   GE 
Sbjct: 583 ATVLVTIHDVNDNEPIFDQSFYNVSVAENEPVGRCILKVSASDP-DCGVNAMVNYTLGEG 641

Query: 89  FS-------ISRQGDISLMQCLDYETEDSYRFTVYATDT-LMTTSATVNISVVNVNDWDP 140
           F         S  G+I +   LDYE  +SY F V ATD   ++T+A + + + +VND  P
Sbjct: 642 FKHLTEFEVRSASGEICIAGELDYERRNSYEFPVLATDRGGLSTTAMIKLQLTDVNDNRP 701

Query: 141 RFRYPQYELFLPHI--PLADLTPGSVIGKVEAADGDKGDRVTLSLR---GPYEKMFSIND 195
            F   +Y + L       A  TP  ++  V A D D G    +S R   G    +F I+ 
Sbjct: 702 VFYPREYNVSLRESGPAQASSTPMPIVAVV-ATDPDAGSFGQVSYRIVAGNEGGIFRIDR 760

Query: 196 -SGHISIV--DLSALNTSTIQLV-VVATDTG 222
            SG I ++  D+ ++ T  + ++ + ATD G
Sbjct: 761 ASGEIFVIRQDMLSVRTQPMHMLNISATDGG 791



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 59/215 (27%), Positives = 87/215 (40%), Gaps = 32/215 (14%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWL------------------SN 83
            F ++EY+V+  E+  +N  ++ V     +   + R+ Y +                    
Sbjct: 1035 FERDEYAVNVSESRSINAQIIQVNASDLDTGNNARITYRIVDAGADNASQSSASVSGVDT 1094

Query: 84   DYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWD 139
            D  + F I    G I L   LD E+ D Y  TV ATD         A V + V++ ND D
Sbjct: 1095 DLAQHFGIFPNSGWIYLRAALDRESRDRYELTVLATDNGTPAAHARARVLVRVLDSNDND 1154

Query: 140  PRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRG-PYEKMFSIND-SG 197
            P+F    Y   +      +L  G+V+G V A D D G+   +     P    F ++  +G
Sbjct: 1155 PKFLRESYAFKIEE----NLRRGAVVGVVSATDADLGENAAIRYSLLPANSSFQVHPVTG 1210

Query: 198  HISIVD-LSALNTSTIQLVVVATDTGNPPRQASVP 231
             IS  + L         LVV A D G P R A  P
Sbjct: 1211 EISTREPLDRELRELYDLVVEARDQGTPTRSARAP 1245



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 63/242 (26%), Positives = 106/242 (43%), Gaps = 36/242 (14%)

Query: 17   AIQYDNQDRYALATLIV--------SKAGTSLREL-------QFSKNEYSVSALENLPVN 61
            A+  +++DRY L  L          ++A   +R L       +F +  Y+    ENL   
Sbjct: 1114 ALDRESRDRYELTVLATDNGTPAAHARARVLVRVLDSNDNDPKFLRESYAFKIEENLRRG 1173

Query: 62   YVLLTVTTNKP---RDLRVKYWL--SNDYGERFSISRQGDISLMQCLDYETEDSYRFTVY 116
             V+  V+        +  ++Y L  +N   +   ++  G+IS  + LD E  + Y   V 
Sbjct: 1174 AVVGVVSATDADLGENAAIRYSLLPANSSFQVHPVT--GEISTREPLDRELRELYDLVVE 1231

Query: 117  ATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADG 173
            A D      +  A V ++V +VND  P    PQ ++        +  PG+ + ++ A D 
Sbjct: 1232 ARDQGTPTRSARAPVRVTVTDVNDNAPEIADPQEDVVSVR---EEQPPGTEVVRIRAIDR 1288

Query: 174  DKGDRVTLS---LRG---PYEKMFSINDSGHI--SIVDLSALNTSTIQLVVVATDTGNPP 225
            D G   +++   L+G       +FSI+ +  I  + V L     S  +L V ATD GNPP
Sbjct: 1289 DHGQNASINYSLLKGRDSDGHGLFSIDANTGIIRTRVMLDHEERSIYRLAVAATDGGNPP 1348

Query: 226  RQ 227
            +Q
Sbjct: 1349 KQ 1350



 Score = 47.0 bits (110), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 59/207 (28%), Positives = 98/207 (47%), Gaps = 27/207 (13%)

Query: 45  FSKNEYSVSALENLPVNYVLLTV---TTNKPRDLRVKYWLS---NDYGERFSI-SRQGDI 97
           F+++ Y  +  EN  V   +L V    T+   +  V+Y ++   +D  + F I +R G +
Sbjct: 274 FNQSRYFATVPENATVGSSVLQVYASDTDADENGLVEYAINRRQSDKEQMFRIDARTGAV 333

Query: 98  SLMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFL--- 151
            + + LD+ET++ +   V A D     + T+A V+I V +VND  P        +FL   
Sbjct: 334 YINKPLDFETKELHELVVVAKDHGEQPLETTAFVSIRVTDVNDNQPTINV----IFLSED 389

Query: 152 --PHIPLADLTPGSVIGKVEAADGDKGDR---VTLSLRGP--YEKMFSINDSGHISIVDL 204
             P I  +   PG  + ++   D D       V +SL G   +  + + ++S ++ IV+L
Sbjct: 390 ASPKISES-AQPGEFVARISVHDPDSKTEYANVNVSLNGGDGHFALTTRDNSIYLVIVNL 448

Query: 205 --SALNTSTIQLVVVATDTGNPPRQAS 229
                 TS   L V+ATD G PP  AS
Sbjct: 449 PLDREATSNYTLSVIATDKGTPPLHAS 475



 Score = 45.1 bits (105), Expect = 0.053,   Method: Compositional matrix adjust.
 Identities = 44/154 (28%), Positives = 71/154 (46%), Gaps = 19/154 (12%)

Query: 89   FSISR-QGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRF---RY 144
            F + R  G + L + LDYE +  Y+  V A+D       T+ + V + ND  P F   + 
Sbjct: 2493 FGLDRYSGKLVLKRRLDYELQQEYQLEVIASDAAHEARTTLTVRVADENDNTPEFVAQKP 2552

Query: 145  PQYELFLPHIPLADLTPGSVIG----KVEAADGD---KGDRVTLSLRGPYEKMFSINDSG 197
            P Y   LP I  ++L   S +      V A D D   +  R++  +  P    FS++ + 
Sbjct: 2553 PAYFALLPAI--SELVDSSSMDMELLTVNATDADAEGRNSRISYHIE-PSASGFSVHATS 2609

Query: 198  HISIVDLS----ALNTSTIQLV-VVATDTGNPPR 226
             +  V++S    A+++S    V +VA D G P R
Sbjct: 2610 GVVSVNMSQLPAAVSSSGDYFVNIVARDAGKPQR 2643



 Score = 42.4 bits (98), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 39/134 (29%), Positives = 65/134 (48%), Gaps = 16/134 (11%)

Query: 103 LDYETEDSYRFTVYATDTL---MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADL 159
           LD E   +Y  +V ATD     +  S ++ + V +VND       P++EL + H  + ++
Sbjct: 450 LDREATSNYTLSVIATDKGTPPLHASKSIFLRVTDVND-----NAPEFELDVYHANVMEV 504

Query: 160 T-PGSVIGKVEAADGDKGDRVTLSLR-----GPYEKMFSIN-DSGHISIVDLSALNTSTI 212
             PG+ + +V+A D D+G+   LS         + + F I+  +G I+        T  +
Sbjct: 505 ADPGTSVLQVQARDRDEGNNAALSYALADTPDTHAQWFQIDTQTGLITTRSHIDCETEPV 564

Query: 213 -QLVVVATDTGNPP 225
            QL V+A D G PP
Sbjct: 565 PQLTVIARDGGQPP 578



 Score = 39.7 bits (91), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 59/211 (27%), Positives = 92/211 (43%), Gaps = 31/211 (14%)

Query: 45   FSKNEYSVSALENLPVNYVLLTV---TTNKPRDLRVKYWL-SNDYGERFSIS-RQGDISL 99
            F K  Y+    E++P   V+ +V   +++  +   V+Y + S D    FSI    G+I +
Sbjct: 815  FEKARYNYYVKEDVPRGTVVGSVIATSSDTAQRSPVRYSIYSGDPDGYFSIEPASGNIRI 874

Query: 100  MQCLDYETEDSYRFTVYAT--DTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLA 157
               LD+E +      + AT  +  +     VNI V +VND  P F      + +P    A
Sbjct: 875  AHPLDHEAKAQVLLNIQATSGEPPVYGHTQVNIEVEDVNDNAPEFETSMVRISVPEN--A 932

Query: 158  DLTPGSVIGKVEAADGDKGD--RVTLSLR------------GPYEKMFSIN-DSGHISIV 202
            +L  G+ +    A D D G   +VT SL                  +F+I+  SGH+ + 
Sbjct: 933  EL--GTPLFAAHAHDKDSGSSGQVTYSLANGNATKSGKQKAAQASSLFAIDARSGHLVLS 990

Query: 203  DLSALNTSTIQ---LVVVATDTGNPPRQASV 230
                L+  T Q   L+V ATD G PP  A +
Sbjct: 991  --RHLDYETAQRHSLIVTATDAGLPPLSADL 1019



 Score = 39.3 bits (90), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 49/109 (44%), Gaps = 14/109 (12%)

Query: 95   GDISLMQCLDYETEDSYRFTVYATDTLMTTSATV--NISVVNVNDWDPRFRYPQYELFLP 152
            G +S     DYE    Y   + A+D +   SA V   + + + +++ P+F    Y   LP
Sbjct: 2940 GIVSSAAVFDYEQRQRYNLQLRASD-MGGRSARVALRVEIESRDEFTPQFTERTYRFVLP 2998

Query: 153  H---IPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDS 196
                +PL     G ++G+V A D D G   RV   L  P+   F +N S
Sbjct: 2999 ATTALPL-----GFIVGQVRATDADSGADGRVVYQLSAPHSH-FKVNRS 3041


>gi|291388282|ref|XP_002710737.1| PREDICTED: cadherin 17 [Oryctolagus cuniculus]
          Length = 832

 Score = 71.2 bits (173), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 82/298 (27%), Positives = 137/298 (45%), Gaps = 43/298 (14%)

Query: 14  VVRAIQYD--NQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNK 71
           +V  + Y+  +Q R+ L    V++A       QFSK  +  +  E+ PV   +  VT   
Sbjct: 539 LVSGVSYNASSQARFQLTVTDVNEAP------QFSKYAFQATVSEDAPVGTKVGNVTAKD 592

Query: 72  PRDLRVKYWLSNDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDTLMTT-SATVN 129
           P  L V Y L ND      I S  GDI  +  LD E E  Y+  V AT+   ++ S+T +
Sbjct: 593 PEGLDVSYSLRNDKRGWLRIDSATGDIFTVAPLDREAESVYQVQVVATEKGRSSLSSTTD 652

Query: 130 ISVV--NVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPY 187
             ++  +VND  PR       LF  H PL+   PGS+I   EA D D+     LS RG +
Sbjct: 653 FLLILQDVNDNPPRLAKEYTGLFFCH-PLS--APGSLI--FEATDDDQ-----LSFRG-H 701

Query: 188 EKMFSINDSGHISIVDLSALNTSTIQL--------------VVVATDTGNPPRQASVPAI 233
           + +FS+      +  ++S +N +  +L               V  +D G PP + +V   
Sbjct: 702 QFIFSLGSESLKTDWEVSRINGTHARLSTKHTNFEERVYNISVRISDMGRPPLEGTVTLP 761

Query: 234 MHFPEAIVQQA--SSKLNSGTSSTVLIILGVVL---IVLGFVIILLILYIHKNKHTKN 286
           + F   + ++    +   SG   TV + +G++L   +++G ++ ++ + + KN    N
Sbjct: 762 VTFCSCVEERCFRPAPKQSGI-PTVGMAVGILLTTFLIIGIILAVVFIRMKKNNSKDN 818


>gi|395845723|ref|XP_003795574.1| PREDICTED: protocadherin Fat 4 isoform 1 [Otolemur garnettii]
          Length = 4982

 Score = 71.2 bits (173), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 77/270 (28%), Positives = 121/270 (44%), Gaps = 44/270 (16%)

Query: 2    INEDD-----FLQPITLV---VRAIQYDNQDRYALATLIVSKAGTSLRELQ--------- 44
            +NEDD     FL P+T V    R + ++ Q  Y L T+     G     ++         
Sbjct: 1880 VNEDDEDGIFFLNPVTGVFNLTRVLDFEAQQYYIL-TVRAEDGGGQFTTIRVYFNILDVN 1938

Query: 45   -----FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWL-SNDYGERFSISRQG 95
                 FS N YS S +ENLP+   +L        D    ++ Y + S D   +F+I + G
Sbjct: 1939 DNPPIFSLNSYSTSLMENLPLGSTVLVFNVTDADDGINSQLAYSIASGDSLGQFTIDKDG 1998

Query: 96   DISLMQCLDYETEDSYRFTVYATD------TLMTTSATVNISVVNVNDWDPRFRYPQYEL 149
             + +++ LD E++  Y   V   D      +  T++A V+I +++VND  P F  P+   
Sbjct: 1999 VLKVLKALDRESQSFYNLVVQVHDLPQLAASRFTSTAQVSIILLDVNDNPPAFLSPK--- 2055

Query: 150  FLPHIPLADLTP-GSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIND-SGHISIV-DL 204
             L +IP  + TP  +V+ K +A D D G    +  +L  P    FSI    G + +  +L
Sbjct: 2056 -LTYIP--ENTPIDTVVFKAQATDPDSGPNSYIEYTLLNPLGNKFSIGTIDGEVRLTGEL 2112

Query: 205  SALNTSTIQLVVVATDTGNPPRQASVPAIM 234
                 S   L VVATD G P   +S   ++
Sbjct: 2113 DREEVSNYTLTVVATDKGQPSLSSSTEVVV 2142



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 49/158 (31%), Positives = 83/158 (52%), Gaps = 13/158 (8%)

Query: 87   ERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRF 142
             +FSI S  G ++L+  LDYET  +Y   + A D+    + ++ T+NI +++ ND  P F
Sbjct: 1256 RQFSIDSSSGQVALIGKLDYETTPAYSLIIQAVDSGTISLNSTCTLNIDILDENDNTPSF 1315

Query: 143  RYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTL--SLRGPY-EKMFSIN-DSGH 198
              P+  LF+    L ++  G ++  V A D D GD   L  S+ G      FSI+ ++G 
Sbjct: 1316 --PKSTLFVD--VLENMRIGELVSSVTATDSDSGDNADLHYSITGTNNHGTFSISPNTGS 1371

Query: 199  ISIVDLSALNTSTI-QLVVVATDTGNPPRQASVPAIMH 235
            I +       T ++ +L + A D G PPR +++  ++H
Sbjct: 1372 IFLAKKLDFETQSLYKLNITAKDQGRPPRSSTMSVVIH 1409



 Score = 57.8 bits (138), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 57/183 (31%), Positives = 89/183 (48%), Gaps = 16/183 (8%)

Query: 56   ENLPVNYVLLTVTTNKPR---DLRVKYWLSNDYGERFSISR-QGDISLMQCLDYETEDSY 111
            EN P++ V+       P    +  ++Y L N  G +FSI    G++ L   LD E   +Y
Sbjct: 2061 ENTPIDTVVFKAQATDPDSGPNSYIEYTLLNPLGNKFSIGTIDGEVRLTGELDREEVSNY 2120

Query: 112  RFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKV 168
              TV ATD     +++S  V + V+++ND +P F    Y++ +    L     G+ I +V
Sbjct: 2121 TLTVVATDKGQPSLSSSTEVVVMVLDINDNNPIFAQALYKVEINENTLT----GTDIIQV 2176

Query: 169  EAADGDKGDRVTLS---LRGPYEKMFSIND-SGHISIVD-LSALNTSTIQLVVVATDTGN 223
             AADGD+G    +    + G   + F I+  +G I++   L    T T  L V ATD G+
Sbjct: 2177 FAADGDEGTNGQVRYGIVGGNANQEFRIDSVTGAITVAKPLDREKTPTYLLTVQATDRGS 2236

Query: 224  PPR 226
             PR
Sbjct: 2237 TPR 2239



 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 61/192 (31%), Positives = 91/192 (47%), Gaps = 24/192 (12%)

Query: 50   YSVSALENLPVNYVLLTVTTNKPRDLRV----KYWLSNDYGERFSIS-RQGDISLMQCLD 104
            +S    EN P+ Y +  VTT+   D+ +    KY +  D    F+I+   GDI + + L+
Sbjct: 2779 FSAHVPENSPLGYTVTRVTTSD-EDIGMNAISKYSIM-DTSLPFTINPSTGDIVISRPLN 2836

Query: 105  YETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSV 164
             E  D +R  V A D+  T S  V I V +VND  PRF  P Y L  P   L ++  GS 
Sbjct: 2837 REDTDRFRIRVSAHDSGWTVSTDVTIFVTDVNDNAPRFSRPSYYLDCPE--LTEI--GSR 2892

Query: 165  IGKVEAADGDKGD--RVTLSLRGPYEKMFSIN-DSGHI---------SIVDLSALNTSTI 212
            + +V A D D+G   +V   ++   E  F IN  +G I         ++   S  N +  
Sbjct: 2893 VTQVSATDPDEGSNGQVFYFIKSQSE-YFRINATTGEIFNKQILKYQNVSGFSNANINRH 2951

Query: 213  QLVVVATDTGNP 224
              +V ++D GNP
Sbjct: 2952 SFIVTSSDRGNP 2963



 Score = 54.3 bits (129), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 33/101 (32%), Positives = 48/101 (47%), Gaps = 5/101 (4%)

Query: 77   VKYWLSNDYGERFSIS-RQGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNV 135
            V Y + +   + F I    GD+   + LD E    Y   V A D L ++   +NI+V +V
Sbjct: 1775 VTYTIISGADDSFRIDPESGDLIATKRLDRERRSKYSLLVRADDGLQSSDVRINITVSDV 1834

Query: 136  NDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG 176
            ND  P+F  P Y   +P     D  PGS++  + A D D G
Sbjct: 1835 NDHTPKFSRPVYSFDIPE----DTIPGSLVAAILATDDDSG 1871



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 51/193 (26%), Positives = 98/193 (50%), Gaps = 12/193 (6%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRDLR--VKYWLS-NDYGERFSISR-QGDISLM 100
           FS+  YS    EN+ + Y + +V+ +   DL   + Y ++  D    F+I++  G +S  
Sbjct: 793 FSQAAYSFVVFENVALGYQVGSVSAST-MDLNSNISYLITTGDQKGMFTINQVTGQLSTA 851

Query: 101 QCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLT 160
             +D E +  Y+  V A+   +T    VNI+V ++ND  P F      + +    + +  
Sbjct: 852 SVIDREEQSFYQLKVVASGGTVTGDTVVNITVKDLNDNSPHFLQAVESVNV----VENWQ 907

Query: 161 PGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIND-SGHISIVDLSALNTSTIQLVVV 217
            G  I + +A D D+G    V  SL+   + +F+IN+ +G+IS++    ++  + Q+ ++
Sbjct: 908 AGHSIFQAKAVDPDEGVNGMVLYSLKQNPKNLFAINEKNGNISLLGPLDVHAGSYQIEIL 967

Query: 218 ATDTGNPPRQASV 230
           A+D G P   +S+
Sbjct: 968 ASDMGVPQLSSSL 980



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 66/148 (44%), Gaps = 10/148 (6%)

Query: 95   GDISLMQCLDYETEDSYRFTVYATDT----LMTTSATVNISVVNVNDWDPRFRYPQYELF 150
            G I     LD ET+D+Y   V ++D      +++S +V ++V +VND  PRF   Q+  +
Sbjct: 2417 GQIITSALLDRETKDNYTLVVVSSDAGSPETLSSSTSVFVTVTDVNDNPPRF---QHHPY 2473

Query: 151  LPHIPLADLTPGSVIGKVEAADGDKGDRVTL--SLRGPYEKMFSINDSGHISIVDLSALN 208
            + HIP   L PGS +  V   D D G    L  SL G   + F I+      +       
Sbjct: 2474 VTHIPSPTL-PGSFVFAVTVTDADIGANSELQYSLSGRNSEKFHIDPLRGAIMAAGPLTG 2532

Query: 209  TSTIQLVVVATDTGNPPRQASVPAIMHF 236
             S +   V   D G+ PR  S    + F
Sbjct: 2533 ASEVTFSVHVKDGGSFPRTDSTTVTVRF 2560



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 72/237 (30%), Positives = 104/237 (43%), Gaps = 22/237 (9%)

Query: 11  ITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNE-YSVSALENLPVNYVLLTVTT 69
           I L + A       +++ A L+V+    +  +  FS+ E Y VS +EN P    LL +  
Sbjct: 548 IVLNISARDQGVHPKFSYAQLVVTLLDVNDEKPVFSQPEGYDVSVVENAPTGTELLILRA 607

Query: 70  NKPRDL----RVKYWLSNDYGERFSISR---QGDISLMQCLDYETEDSYRFTVYATD--- 119
              RDL     V + L     ++ S       G +S +  LD E +  Y   V ATD   
Sbjct: 608 TD-RDLGDNGTVGFSLQEAETDQRSFRLDPVSGRLSTVSSLDREEQAFYSLLVVATDLGS 666

Query: 120 TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRV 179
              ++   +N+S++++ND  P F   QY     HI   +   GS I  V A D D G   
Sbjct: 667 PPQSSMVRINVSLLDINDNSPVFYPVQY---FAHI-QENEPGGSYITTVSATDPDLGPNG 722

Query: 180 TL--SLRGPYEKMFSIN-DSGHISI-VDLSALNTSTIQLVVVATDTGN--PPRQASV 230
           T+  S+       F +N  SG IS  + L     +  QL +VATD GN   P QA V
Sbjct: 723 TVKYSISAGDRSRFQVNAQSGVISTRMALDREEKTAYQLQIVATDGGNLQSPNQAIV 779



 Score = 44.7 bits (104), Expect = 0.082,   Method: Compositional matrix adjust.
 Identities = 39/140 (27%), Positives = 66/140 (47%), Gaps = 13/140 (9%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGERFSIS-RQGDISLM 100
            F  +EY  + LEN P    ++ +     +   +  + Y + +   + F I    G I+  
Sbjct: 3196 FLSDEYFPTVLENAPSGTTVIHLNATDADSGTNAVIAYTVQSSDSDLFVIDPNTGVITTQ 3255

Query: 101  QCLDYETEDSYRFTVYA---TDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLA 157
              LD+ET+ SY  TV A    D    +  TVNI +   N++ PRF    Y     +  ++
Sbjct: 3256 GFLDFETKQSYHLTVKAFNVPDEERCSFTTVNIQLKGTNEYVPRFVSKLY-----YFEIS 3310

Query: 158  DLTP-GSVIGKVEAADGDKG 176
            +  P G+++G+V A+D D G
Sbjct: 3311 EAAPKGTIVGEVFASDRDLG 3330



 Score = 42.4 bits (98), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 52/179 (29%), Positives = 82/179 (45%), Gaps = 38/179 (21%)

Query: 89   FSISRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYP 145
            F++S  G++ ++Q LD E+++ +  TV ATD+    +T + T+++ V +VND  P F   
Sbjct: 2308 FTLSASGELRVIQSLDRESKEQFVLTVTATDSGSPALTGTGTIHVIVDDVNDNVPTFASK 2367

Query: 146  QYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR---GPYEKMFSINDS-GHI-- 199
             Y   +P     D   G+ +  V A+D D      +S R   G     F+IN S G I  
Sbjct: 2368 MYFTTIPE----DAPTGTDVLLVNASDADASANAVISYRIIGG--NSQFTINPSTGQIIT 2421

Query: 200  -SIVDLSALNTSTIQLVVVATDTG--------------------NPPRQASVPAIMHFP 237
             +++D    +  T  LVVV++D G                    NPPR    P + H P
Sbjct: 2422 SALLDRETKDNYT--LVVVSSDAGSPETLSSSTSVFVTVTDVNDNPPRFQHHPYVTHIP 2478



 Score = 39.3 bits (90), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 36/121 (29%), Positives = 63/121 (52%), Gaps = 13/121 (10%)

Query: 111  YRFTVYATDTLM----TTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIG 166
            + FTV ATD  +       ATV++ + ++ND  PRF    Y+  +     A+LT    + 
Sbjct: 1175 FSFTVIATDQGLPQPLKDQATVHVYMKDINDNAPRFLKDFYQATISE-SAANLTQ---VL 1230

Query: 167  KVEAADGDKGDRVTLS---LRGPYEKMFSIN-DSGHISIV-DLSALNTSTIQLVVVATDT 221
            +V A+D D+G+   +    ++G  E+ FSI+  SG ++++  L    T    L++ A D+
Sbjct: 1231 RVSASDVDEGNNGLIHYSIIKGNEERQFSIDSSSGQVALIGKLDYETTPAYSLIIQAVDS 1290

Query: 222  G 222
            G
Sbjct: 1291 G 1291



 Score = 38.9 bits (89), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 31/108 (28%), Positives = 55/108 (50%), Gaps = 7/108 (6%)

Query: 89   FSISRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYP 145
            FS++  G +S  + +D E    +  +V   D+    M+++ TV+I+V++ ND   + R  
Sbjct: 3560 FSLNTAGVLSTTREIDREQIADFYLSVVTRDSGVPQMSSTGTVHITVIDQNDNPSQSR-- 3617

Query: 146  QYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSI 193
              E+F+ +    +L PG ++G V+  D D  D    SL      +FSI
Sbjct: 3618 TVEIFVNY--YGNLFPGGILGSVKPQDPDILDSFHCSLTSGVTSLFSI 3663


>gi|395845725|ref|XP_003795575.1| PREDICTED: protocadherin Fat 4 isoform 2 [Otolemur garnettii]
          Length = 4981

 Score = 71.2 bits (173), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 77/270 (28%), Positives = 121/270 (44%), Gaps = 44/270 (16%)

Query: 2    INEDD-----FLQPITLV---VRAIQYDNQDRYALATLIVSKAGTSLRELQ--------- 44
            +NEDD     FL P+T V    R + ++ Q  Y L T+     G     ++         
Sbjct: 1880 VNEDDEDGIFFLNPVTGVFNLTRVLDFEAQQYYIL-TVRAEDGGGQFTTIRVYFNILDVN 1938

Query: 45   -----FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWL-SNDYGERFSISRQG 95
                 FS N YS S +ENLP+   +L        D    ++ Y + S D   +F+I + G
Sbjct: 1939 DNPPIFSLNSYSTSLMENLPLGSTVLVFNVTDADDGINSQLAYSIASGDSLGQFTIDKDG 1998

Query: 96   DISLMQCLDYETEDSYRFTVYATD------TLMTTSATVNISVVNVNDWDPRFRYPQYEL 149
             + +++ LD E++  Y   V   D      +  T++A V+I +++VND  P F  P+   
Sbjct: 1999 VLKVLKALDRESQSFYNLVVQVHDLPQLAASRFTSTAQVSIILLDVNDNPPAFLSPK--- 2055

Query: 150  FLPHIPLADLTP-GSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIND-SGHISIV-DL 204
             L +IP  + TP  +V+ K +A D D G    +  +L  P    FSI    G + +  +L
Sbjct: 2056 -LTYIP--ENTPIDTVVFKAQATDPDSGPNSYIEYTLLNPLGNKFSIGTIDGEVRLTGEL 2112

Query: 205  SALNTSTIQLVVVATDTGNPPRQASVPAIM 234
                 S   L VVATD G P   +S   ++
Sbjct: 2113 DREEVSNYTLTVVATDKGQPSLSSSTEVVV 2142



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 49/158 (31%), Positives = 83/158 (52%), Gaps = 13/158 (8%)

Query: 87   ERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRF 142
             +FSI S  G ++L+  LDYET  +Y   + A D+    + ++ T+NI +++ ND  P F
Sbjct: 1256 RQFSIDSSSGQVALIGKLDYETTPAYSLIIQAVDSGTISLNSTCTLNIDILDENDNTPSF 1315

Query: 143  RYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTL--SLRGPY-EKMFSIN-DSGH 198
              P+  LF+    L ++  G ++  V A D D GD   L  S+ G      FSI+ ++G 
Sbjct: 1316 --PKSTLFVD--VLENMRIGELVSSVTATDSDSGDNADLHYSITGTNNHGTFSISPNTGS 1371

Query: 199  ISIVDLSALNTSTI-QLVVVATDTGNPPRQASVPAIMH 235
            I +       T ++ +L + A D G PPR +++  ++H
Sbjct: 1372 IFLAKKLDFETQSLYKLNITAKDQGRPPRSSTMSVVIH 1409



 Score = 57.8 bits (138), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 57/183 (31%), Positives = 89/183 (48%), Gaps = 16/183 (8%)

Query: 56   ENLPVNYVLLTVTTNKPR---DLRVKYWLSNDYGERFSISR-QGDISLMQCLDYETEDSY 111
            EN P++ V+       P    +  ++Y L N  G +FSI    G++ L   LD E   +Y
Sbjct: 2061 ENTPIDTVVFKAQATDPDSGPNSYIEYTLLNPLGNKFSIGTIDGEVRLTGELDREEVSNY 2120

Query: 112  RFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKV 168
              TV ATD     +++S  V + V+++ND +P F    Y++ +    L     G+ I +V
Sbjct: 2121 TLTVVATDKGQPSLSSSTEVVVMVLDINDNNPIFAQALYKVEINENTLT----GTDIIQV 2176

Query: 169  EAADGDKGDRVTLS---LRGPYEKMFSIND-SGHISIVD-LSALNTSTIQLVVVATDTGN 223
             AADGD+G    +    + G   + F I+  +G I++   L    T T  L V ATD G+
Sbjct: 2177 FAADGDEGTNGQVRYGIVGGNANQEFRIDSVTGAITVAKPLDREKTPTYLLTVQATDRGS 2236

Query: 224  PPR 226
             PR
Sbjct: 2237 TPR 2239



 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 61/192 (31%), Positives = 91/192 (47%), Gaps = 24/192 (12%)

Query: 50   YSVSALENLPVNYVLLTVTTNKPRDLRV----KYWLSNDYGERFSIS-RQGDISLMQCLD 104
            +S    EN P+ Y +  VTT+   D+ +    KY +  D    F+I+   GDI + + L+
Sbjct: 2777 FSAHVPENSPLGYTVTRVTTSD-EDIGMNAISKYSIM-DTSLPFTINPSTGDIVISRPLN 2834

Query: 105  YETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSV 164
             E  D +R  V A D+  T S  V I V +VND  PRF  P Y L  P   L ++  GS 
Sbjct: 2835 REDTDRFRIRVSAHDSGWTVSTDVTIFVTDVNDNAPRFSRPSYYLDCPE--LTEI--GSR 2890

Query: 165  IGKVEAADGDKGD--RVTLSLRGPYEKMFSIN-DSGHI---------SIVDLSALNTSTI 212
            + +V A D D+G   +V   ++   E  F IN  +G I         ++   S  N +  
Sbjct: 2891 VTQVSATDPDEGSNGQVFYFIKSQSE-YFRINATTGEIFNKQILKYQNVSGFSNANINRH 2949

Query: 213  QLVVVATDTGNP 224
              +V ++D GNP
Sbjct: 2950 SFIVTSSDRGNP 2961



 Score = 54.3 bits (129), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 33/101 (32%), Positives = 48/101 (47%), Gaps = 5/101 (4%)

Query: 77   VKYWLSNDYGERFSIS-RQGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNV 135
            V Y + +   + F I    GD+   + LD E    Y   V A D L ++   +NI+V +V
Sbjct: 1775 VTYTIISGADDSFRIDPESGDLIATKRLDRERRSKYSLLVRADDGLQSSDVRINITVSDV 1834

Query: 136  NDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG 176
            ND  P+F  P Y   +P     D  PGS++  + A D D G
Sbjct: 1835 NDHTPKFSRPVYSFDIPE----DTIPGSLVAAILATDDDSG 1871



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 51/193 (26%), Positives = 98/193 (50%), Gaps = 12/193 (6%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRDLR--VKYWLS-NDYGERFSISR-QGDISLM 100
           FS+  YS    EN+ + Y + +V+ +   DL   + Y ++  D    F+I++  G +S  
Sbjct: 793 FSQAAYSFVVFENVALGYQVGSVSAST-MDLNSNISYLITTGDQKGMFTINQVTGQLSTA 851

Query: 101 QCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLT 160
             +D E +  Y+  V A+   +T    VNI+V ++ND  P F      + +    + +  
Sbjct: 852 SVIDREEQSFYQLKVVASGGTVTGDTVVNITVKDLNDNSPHFLQAVESVNV----VENWQ 907

Query: 161 PGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIND-SGHISIVDLSALNTSTIQLVVV 217
            G  I + +A D D+G    V  SL+   + +F+IN+ +G+IS++    ++  + Q+ ++
Sbjct: 908 AGHSIFQAKAVDPDEGVNGMVLYSLKQNPKNLFAINEKNGNISLLGPLDVHAGSYQIEIL 967

Query: 218 ATDTGNPPRQASV 230
           A+D G P   +S+
Sbjct: 968 ASDMGVPQLSSSL 980



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 66/148 (44%), Gaps = 10/148 (6%)

Query: 95   GDISLMQCLDYETEDSYRFTVYATDT----LMTTSATVNISVVNVNDWDPRFRYPQYELF 150
            G I     LD ET+D+Y   V ++D      +++S +V ++V +VND  PRF   Q+  +
Sbjct: 2415 GQIITSALLDRETKDNYTLVVVSSDAGSPETLSSSTSVFVTVTDVNDNPPRF---QHHPY 2471

Query: 151  LPHIPLADLTPGSVIGKVEAADGDKGDRVTL--SLRGPYEKMFSINDSGHISIVDLSALN 208
            + HIP   L PGS +  V   D D G    L  SL G   + F I+      +       
Sbjct: 2472 VTHIPSPTL-PGSFVFAVTVTDADIGANSELQYSLSGRNSEKFHIDPLRGAIMAAGPLTG 2530

Query: 209  TSTIQLVVVATDTGNPPRQASVPAIMHF 236
             S +   V   D G+ PR  S    + F
Sbjct: 2531 ASEVTFSVHVKDGGSFPRTDSTTVTVRF 2558



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 72/237 (30%), Positives = 104/237 (43%), Gaps = 22/237 (9%)

Query: 11  ITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNE-YSVSALENLPVNYVLLTVTT 69
           I L + A       +++ A L+V+    +  +  FS+ E Y VS +EN P    LL +  
Sbjct: 548 IVLNISARDQGVHPKFSYAQLVVTLLDVNDEKPVFSQPEGYDVSVVENAPTGTELLILRA 607

Query: 70  NKPRDL----RVKYWLSNDYGERFSISR---QGDISLMQCLDYETEDSYRFTVYATD--- 119
              RDL     V + L     ++ S       G +S +  LD E +  Y   V ATD   
Sbjct: 608 TD-RDLGDNGTVGFSLQEAETDQRSFRLDPVSGRLSTVSSLDREEQAFYSLLVVATDLGS 666

Query: 120 TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRV 179
              ++   +N+S++++ND  P F   QY     HI   +   GS I  V A D D G   
Sbjct: 667 PPQSSMVRINVSLLDINDNSPVFYPVQY---FAHI-QENEPGGSYITTVSATDPDLGPNG 722

Query: 180 TL--SLRGPYEKMFSIN-DSGHISI-VDLSALNTSTIQLVVVATDTGN--PPRQASV 230
           T+  S+       F +N  SG IS  + L     +  QL +VATD GN   P QA V
Sbjct: 723 TVKYSISAGDRSRFQVNAQSGVISTRMALDREEKTAYQLQIVATDGGNLQSPNQAIV 779



 Score = 44.7 bits (104), Expect = 0.081,   Method: Compositional matrix adjust.
 Identities = 39/140 (27%), Positives = 66/140 (47%), Gaps = 13/140 (9%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGERFSIS-RQGDISLM 100
            F  +EY  + LEN P    ++ +     +   +  + Y + +   + F I    G I+  
Sbjct: 3194 FLSDEYFPTVLENAPSGTTVIHLNATDADSGTNAVIAYTVQSSDSDLFVIDPNTGVITTQ 3253

Query: 101  QCLDYETEDSYRFTVYA---TDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLA 157
              LD+ET+ SY  TV A    D    +  TVNI +   N++ PRF    Y     +  ++
Sbjct: 3254 GFLDFETKQSYHLTVKAFNVPDEERCSFTTVNIQLKGTNEYVPRFVSKLY-----YFEIS 3308

Query: 158  DLTP-GSVIGKVEAADGDKG 176
            +  P G+++G+V A+D D G
Sbjct: 3309 EAAPKGTIVGEVFASDRDLG 3328



 Score = 42.7 bits (99), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 50/176 (28%), Positives = 81/176 (46%), Gaps = 34/176 (19%)

Query: 89   FSISRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYP 145
            F++S  G++ ++Q LD E+++ +  TV ATD+    +T + T+++ V +VND  P F   
Sbjct: 2308 FTLSASGELRVIQSLDRESKEQFVLTVTATDSGSPALTGTGTIHVIVDDVNDNVPTFASK 2367

Query: 146  QYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDS-GHI---SI 201
             Y   +P     D   G+ +  V A+D D      + + G     F+IN S G I   ++
Sbjct: 2368 MYFTTIPE----DAPTGTDVLLVNASDADASANAVIRIIGG-NSQFTINPSTGQIITSAL 2422

Query: 202  VDLSALNTSTIQLVVVATDTG--------------------NPPRQASVPAIMHFP 237
            +D    +  T  LVVV++D G                    NPPR    P + H P
Sbjct: 2423 LDRETKDNYT--LVVVSSDAGSPETLSSSTSVFVTVTDVNDNPPRFQHHPYVTHIP 2476



 Score = 39.3 bits (90), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 36/121 (29%), Positives = 63/121 (52%), Gaps = 13/121 (10%)

Query: 111  YRFTVYATDTLM----TTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIG 166
            + FTV ATD  +       ATV++ + ++ND  PRF    Y+  +     A+LT    + 
Sbjct: 1175 FSFTVIATDQGLPQPLKDQATVHVYMKDINDNAPRFLKDFYQATISE-SAANLTQ---VL 1230

Query: 167  KVEAADGDKGDRVTLS---LRGPYEKMFSIN-DSGHISIV-DLSALNTSTIQLVVVATDT 221
            +V A+D D+G+   +    ++G  E+ FSI+  SG ++++  L    T    L++ A D+
Sbjct: 1231 RVSASDVDEGNNGLIHYSIIKGNEERQFSIDSSSGQVALIGKLDYETTPAYSLIIQAVDS 1290

Query: 222  G 222
            G
Sbjct: 1291 G 1291



 Score = 38.9 bits (89), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 31/108 (28%), Positives = 55/108 (50%), Gaps = 7/108 (6%)

Query: 89   FSISRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYP 145
            FS++  G +S  + +D E    +  +V   D+    M+++ TV+I+V++ ND   + R  
Sbjct: 3558 FSLNTAGVLSTTREIDREQIADFYLSVVTRDSGVPQMSSTGTVHITVIDQNDNPSQSR-- 3615

Query: 146  QYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSI 193
              E+F+ +    +L PG ++G V+  D D  D    SL      +FSI
Sbjct: 3616 TVEIFVNY--YGNLFPGGILGSVKPQDPDILDSFHCSLTSGVTSLFSI 3661


>gi|195437460|ref|XP_002066658.1| GK24450 [Drosophila willistoni]
 gi|194162743|gb|EDW77644.1| GK24450 [Drosophila willistoni]
          Length = 5118

 Score = 71.2 bits (173), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 61/204 (29%), Positives = 98/204 (48%), Gaps = 15/204 (7%)

Query: 45   FSKNEYSVSALENLPVNYVLLT-VTTNKPRDL--RVKYWLSNDYGERFSISRQ-GDISLM 100
            F  N Y  S  ENLPV  V+L    T+K   L  ++++ L  ++  RF I+   G+I+  
Sbjct: 2480 FELNSYHASIEENLPVGTVVLQPKATDKDEGLNAKLRFNLLGEHMTRFHINTDTGEITTA 2539

Query: 101  QCLDYETEDSYRFTVYATDTLMT----TSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
              LD E  D+YR T+ A D+ +T    TS  + I VV+VND  P+F    Y++ +P    
Sbjct: 2540 ALLDREETDTYRLTLMAQDSSITEPRATSVNLTIKVVDVNDNVPQFDSSNYKIAVPD--- 2596

Query: 157  ADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDSGHISIVDLSALNTSTIQL 214
              + P   +   +A D D+G   RV   L+G  E+ F +N+   +    +   + +   +
Sbjct: 2597 -KMGPDRFVFGAKALDLDEGVNARVQYKLKGQDEQYFIVNEKTGVIKTKMQLESGTVYSI 2655

Query: 215  VVVATDTGNPPRQASVP-AIMHFP 237
             + A D G  P+ +     IM  P
Sbjct: 2656 NIHAMDQGEMPQSSMAQLTIMQRP 2679



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 77/265 (29%), Positives = 120/265 (45%), Gaps = 40/265 (15%)

Query: 1    DINEDDFLQPITLVVRAIQYDNQDRYALATLIV-------SKAGTSLREL---------- 43
            D N D  +   T VVR  +  N +R A  TL V         + + + EL          
Sbjct: 2310 DQNHDFSIGEDTGVVRVAKNLNYERKARYTLTVRAEDCAIENSASDVAELTISILDINDN 2369

Query: 44   --QFSKNEYSVSALEN-LPVN--YVLLTVTTNK---PRDLRVKYWLSNDYGERFSI-SRQ 94
               F  + Y    +EN +P N  YVL     +    P + +V+Y+L     + F I +  
Sbjct: 2370 RPTFLDSPYLARVMENTVPPNGGYVLTVKAYDADTPPLNSQVRYFLKEGNSDLFRINAST 2429

Query: 95   GDISLMQCLDYETEDSYRFTVYATDTL---MTTSATVNISVVNVNDWDPRFRYPQYELFL 151
            G+ISL++ LD E++  Y  T+ A DT    +T S  V + V ++ND  P F    Y    
Sbjct: 2430 GEISLLKPLDRESQSEYILTLVAMDTGLPPLTGSGIVRVEVQDINDNGPVFELNSY---- 2485

Query: 152  PHIPLADLTP-GSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIN-DSGHISIVD-LSA 206
             H  + +  P G+V+ + +A D D+G   ++  +L G +   F IN D+G I+    L  
Sbjct: 2486 -HASIEENLPVGTVVLQPKATDKDEGLNAKLRFNLLGEHMTRFHINTDTGEITTAALLDR 2544

Query: 207  LNTSTIQLVVVATDTG-NPPRQASV 230
              T T +L ++A D+    PR  SV
Sbjct: 2545 EETDTYRLTLMAQDSSITEPRATSV 2569



 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 51/188 (27%), Positives = 86/188 (45%), Gaps = 17/188 (9%)

Query: 50   YSVSALENLPVNYVLLTVTTNK---PRDLRVKYWLSNDYGERFSISRQ-GDISLMQCLDY 105
            +S++  EN  +   ++ VT++      +    Y  S + G +F I  Q G+I++   LD 
Sbjct: 2899 FSLNVTENAELGSFVIRVTSSDLDLGANANASYTFSENPGNKFKIEPQSGNITVAGHLDR 2958

Query: 106  ETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVI 165
            E +D Y   V A+D        + I++ + ND  P F +  Y    P +  A     + +
Sbjct: 2959 EQQDEYILKVVASDGAWRAETPITITIQDQNDNAPEFEHSFYSFSFPELQHA----VAFV 3014

Query: 166  GKVEAADGDK---GDRVTLSLRGPYEKMFSIN-DSGHI----SIVDLSALNTSTIQLVVV 217
            G++ A D DK      ++ SL+ P   MFSI+  +G I     I    +   +   L ++
Sbjct: 3015 GQIIATDRDKQGPNSVISYSLQQP-SPMFSIDPGTGEIFSKKRIEYKRSHEENIYALTIL 3073

Query: 218  ATDTGNPP 225
            ATD G PP
Sbjct: 3074 ATDNGKPP 3081



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 57/193 (29%), Positives = 92/193 (47%), Gaps = 19/193 (9%)

Query: 45   FSKNEYSVSALENLPVN-YVLLTVTTNK--PRDLRVKYWLSNDYGER--FSI-SRQGDIS 98
            F++ EY     EN P   +V     T+K  P++  ++Y       +R  FS+ S  G IS
Sbjct: 3315 FNQTEYHSYIAENKPTGTFVFQAHATDKDSPKNAIIQYAFLPSGTDRHFFSVNSTTGIIS 3374

Query: 99   LMQCLDYETEDSYRFTVYAT--DTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
                 DYE   +Y   + A   D+ M + AT+ I ++ VN++ P F  P +     H  +
Sbjct: 3375 SAAIFDYEERRTYTLQLKAKNPDSTMESYATLYIHILGVNEFYPHFLQPVF-----HFDV 3429

Query: 157  ADLTP-GSVIGKVEAADGDKGD--RVTLSLRGPY-EKMFSINDSGHISIVD--LSALNTS 210
            ++ +P GS +G V+A D D G+  RV   L G   +K F IN +  +  V   L     +
Sbjct: 3430 SETSPIGSSVGAVQATDKDMGEDGRVYYLLVGSSNDKGFGINTNTGVLFVSRHLDRETQN 3489

Query: 211  TIQLVVVATDTGN 223
             + L V+A + G+
Sbjct: 3490 RVVLTVIAKNYGS 3502



 Score = 47.0 bits (110), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 60/235 (25%), Positives = 109/235 (46%), Gaps = 28/235 (11%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVK-----YWLSN-DYGERFSI-SRQGD 96
            +F K  Y+ S  E  P+   + TV     +D+R++     Y + N +  + F I +  G+
Sbjct: 3525 EFIKRFYTASISEATPIGSKVTTVKAID-KDVRLQNNQFSYSIINGNLNQSFRIDAHSGE 3583

Query: 97   ISLMQCLDYETEDSYRFTVYATDTLM---TTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
            I     LD E+   Y   + A DT +   T SA + I++ +VND  P F     + ++  
Sbjct: 3584 IKTAALLDRESIAHYNLIIGAIDTGLPPQTGSAELTITITDVNDNGPTFAPEALQGYIAE 3643

Query: 154  IPLADLTPGSVIGKVEAADGD---KGDRVTLSLRG-PYEKMFSIND-SGHI-SIVDLSAL 207
                +  PG+ I  + A D D    G   T  L+G P++   SI+  +G + S       
Sbjct: 3644 ----NEPPGTSIMTLAATDPDLPHNGGPFTYYLKGGPHKSWLSIDKVTGLVKSTTSFDRE 3699

Query: 208  NTSTIQLVVVATDTGNPPRQASVPAIMHFPEAIVQQASSKLNSGTSSTVLIILGV 262
             T T+++++   D+G PP +A+   I++    ++ Q     N  +S  V +++G+
Sbjct: 3700 ATPTLEVIIEVEDSGKPPLRATHTLIIN----VLDQND---NPSSSRNVQVLVGI 3747



 Score = 47.0 bits (110), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 55/220 (25%), Positives = 93/220 (42%), Gaps = 24/220 (10%)

Query: 13   LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKP 72
            L V+AI      +     +++   G +    +FS   Y V   EN+P+   ++TV    P
Sbjct: 3178 LTVKAIDRGVPPKSDQTRVVIIVTGENRHTPEFSARRYQVIVPENVPIGSTIITVVATDP 3237

Query: 73   RDLR----VKYWLS-NDYGERFSISRQ-GDISLMQCLDYETEDSYRFTVYATD---TLMT 123
             DL     +++ +S  +  + FS++ Q G I +   LDY+    Y   +   D     +T
Sbjct: 3238 -DLGPNGILRFGISGGNERQDFSVNEQTGAIIIQHALDYDLIQEYHLNITVRDLGFKSLT 3296

Query: 124  TSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTP-GSVIGKVEAADGDKGDRVTLS 182
             +A + I + +VND  P F   +Y     H  +A+  P G+ + +  A D D      + 
Sbjct: 3297 DTAILTIILTDVNDNPPVFNQTEY-----HSYIAENKPTGTFVFQAHATDKDSPKNAIIQ 3351

Query: 183  L----RGPYEKMFSINDSGHI----SIVDLSALNTSTIQL 214
                  G     FS+N +  I    +I D     T T+QL
Sbjct: 3352 YAFLPSGTDRHFFSVNSTTGIISSAAIFDYEERRTYTLQL 3391



 Score = 47.0 bits (110), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 51/203 (25%), Positives = 97/203 (47%), Gaps = 17/203 (8%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSN-DYGERFSIS-RQGDISLMQ- 101
             +K ++++S  E++P   ++  V+   P+   ++Y ++  + G   ++    G +++ + 
Sbjct: 2689 MAKTQFTLS--EDVPPGKMIAKVSATSPKKGAMRYAIAGGNLGNAVNVDPTSGALTVGKD 2746

Query: 102  CLDYETEDSYRFTVYATDTLMTTS----ATVNISVVNVNDWDPRFRYPQYELFLPHIPLA 157
             LDYE    Y   V A+D+ +  S     ++ I+V + ND  P      Y + +    L 
Sbjct: 2747 GLDYELAHQYEIWVEASDSDIKPSLRSVMSLTINVSDANDNPPITEKLIYNVEV----LE 2802

Query: 158  DLTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSIN-DSGHI-SIVDLSALNTSTIQ 213
            + +P  +I  ++A+D D GD   ++  L+  YE  F IN DSG I + + L     +   
Sbjct: 2803 EESPPQMIVVIKASDRDSGDNGEISYRLKNDYEGTFEINEDSGEIYTTMRLDREELADYA 2862

Query: 214  LVVVATDTGNPPRQASVPAIMHF 236
            LVV A D G P    +   ++H 
Sbjct: 2863 LVVEAVDQGVPQLTGTASVMIHL 2885



 Score = 43.9 bits (102), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 44/168 (26%), Positives = 74/168 (44%), Gaps = 12/168 (7%)

Query: 76   RVKYWLSNDYGERFSISR-QGDISLMQCLDYETEDSYRFTVYATDTL---MTTSATVNIS 131
            R+ Y L+++  E F IS   G + L + +  E        + ATD     +    +++I+
Sbjct: 967  RITYNLTHNPNELFRISSVTGVLYLQRPIRSEPNSILSVELMATDGGSPPLFGKLSLSIA 1026

Query: 132  VVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYE 188
            +V+VND  P F +  YE  L    L      +    + A+D D G+   +S   + G  +
Sbjct: 1027 IVDVNDHTPVFDHTSYETSL----LESTKVNARFFGLAASDSDVGENARISYSIIEGNGD 1082

Query: 189  KMFSINDSGHISIVD-LSALNTSTIQLVVVATDTGNPPRQASVPAIMH 235
            K+F I   G++ +   L         L V   D G P R + VP ++H
Sbjct: 1083 KVFGIFPDGYLFVRSPLDREERDYYALTVACEDAGYPSRSSQVPVVIH 1130



 Score = 42.7 bits (99), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 52/219 (23%), Positives = 94/219 (42%), Gaps = 15/219 (6%)

Query: 15   VRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRD 74
            V AI    Q R A   + V+    +    +F    ++ +  E+L + + + T+    P  
Sbjct: 1774 VYAIALGGQPRTAHTKVKVTILDKNDSPPEFLDMPFAFNVSEDLEIGHTIATIRAQDPDT 1833

Query: 75   L-RVKYWLSNDYGERFSIS-RQGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISV 132
            L  + + L + +  +F +    G++ L   LD ET+  Y   +  +D +  T   + I V
Sbjct: 1834 LGSITFSLVSGHNGKFLLEPTTGNLILNDTLDRETKSKYDVRIRVSDGVQYTETNIIIEV 1893

Query: 133  VNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEK 189
             + ND  P F    Y   +P     +   G  +G+V A D D G    +S   +      
Sbjct: 1894 NDTNDNPPMFDETVYSFDIPE----NAPKGFQVGQVVATDNDLGQNGLVSYTVVSDWAND 1949

Query: 190  MFSIN-DSGHISIVDLSALNTSTIQ---LVVVATDTGNP 224
            +FS+N  +G +++   + L+   +Q   L+V A D G P
Sbjct: 1950 VFSLNPQTGMLTLT--ARLDYEEVQHYILLVQAQDNGQP 1986



 Score = 42.0 bits (97), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 61/233 (26%), Positives = 105/233 (45%), Gaps = 30/233 (12%)

Query: 25  RYALATLIVSKAGTSLRELQFSKNEY-SVSALENLPVNYVLLTVTT---NKPRDLRVKYW 80
           +YA   L V+    +    QF  ++  +V+  E+ P   V+ T+     ++  +  V Y 
Sbjct: 589 KYAYTQLKVTILDENDEAPQFGPHQQINVTLSEDAPPQSVITTLMATDHDQGTNGSVSYQ 648

Query: 81  LSND----YGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDTL----MTTSATVNIS 131
           L+ +    Y ++F+I S  G ++    LD ET  +Y   V A D       + +ATV +S
Sbjct: 649 LAPNMERLYPQQFAIDSITGQLTTRHTLDRETMANYEILVIARDQGAPIPQSATATVYLS 708

Query: 132 VVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG-DRVTLSLRGPYEKM 190
           V ++ND  P F YP++ ++      +D   G  +  V A D D   + +  +L    E +
Sbjct: 709 VADINDNSPEF-YPKHYIYTLS-SGSDSERGKSLLNVTATDLDNDKESIAYTLESGGEGL 766

Query: 191 FSINDS--------GHISIVDLSALNTSTIQLVVVATDTGNPPRQASVPAIMH 235
           F ++ S        GH    DL     S  +L + A D G   R+++  AI+H
Sbjct: 767 FHVDASTGSVQLLAGHGHGSDL----MSHYRLTISARDAGQ--RRSAQDAIVH 813



 Score = 39.3 bits (90), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 42/146 (28%), Positives = 65/146 (44%), Gaps = 18/146 (12%)

Query: 95   GDISLMQCLDYE---TEDSYRFTVYATDTL---MTTSATVNISVVNVNDWDPRFRYPQYE 148
            G+I   + ++Y+    E+ Y  T+ ATD     + +   V I++VN N+  P+F   +Y 
Sbjct: 3049 GEIFSKKRIEYKRSHEENIYALTILATDNGKPPLYSECMVQITIVNSNNSPPKFEQAEYL 3108

Query: 149  LFLPHIPLADLTPGSVIGKVEAADGDK----GDRVTLSLRGPYEKM-FSIND-SGHISIV 202
              LP        PG  I +V A D  K     + +  +L    +   F IN   G I++ 
Sbjct: 3109 SPLPE----HARPGQRIVRVHATDNKKDSGSNNEIDYALVSANQSAYFGINKHDGWITLA 3164

Query: 203  D--LSALNTSTIQLVVVATDTGNPPR 226
               L  L  S  +L V A D G PP+
Sbjct: 3165 KPLLDVLPNSRFELTVKAIDRGVPPK 3190



 Score = 38.5 bits (88), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 39/156 (25%), Positives = 73/156 (46%), Gaps = 17/156 (10%)

Query: 81   LSNDYGERFSISRQ-GDISLMQCLDYETEDSYRFTVYATDTLMTT--SATVNISVVNVND 137
            L  D  E F+I R+ G ++  + +D E + SY+  + A+    ++     V ISV++VND
Sbjct: 867  LQGDKNENFAIDRKSGRLTTARPIDREAQASYQLIILASSPDFSSYGKCLVRISVIDVND 926

Query: 138  WDPRFRYPQYELFLPHIPLADLTPGSVIG------KVEAADGDKGDRVTLSLRGPYEKMF 191
              P F        LP + L  +   + +G      +V   D    +R+T +L     ++F
Sbjct: 927  NAPSFAQD-----LPSM-LISVPENTAVGQEIYLPRVRDRDTGNNNRITYNLTHNPNELF 980

Query: 192  SINDSGHISIVD--LSALNTSTIQLVVVATDTGNPP 225
             I+    +  +   + +   S + + ++ATD G+PP
Sbjct: 981  RISSVTGVLYLQRPIRSEPNSILSVELMATDGGSPP 1016


>gi|383864925|ref|XP_003707928.1| PREDICTED: LOW QUALITY PROTEIN: cadherin-related tumor
            suppressor-like [Megachile rotundata]
          Length = 5000

 Score = 70.9 bits (172), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 59/206 (28%), Positives = 98/206 (47%), Gaps = 15/206 (7%)

Query: 44   QFSKNEYSVSALEN-LPVNYVLLTVTTNKPRDLRVK--YWLSNDYGERFSI-SRQGDISL 99
            +F++ EY  +  EN +   +V     T+K   L  K  Y L  +  ERF+  S  G++  
Sbjct: 2395 EFNRQEYKATVSENSVSGTWVAKPHATDKDEGLNAKITYRLLGENSERFTADSETGEVFT 2454

Query: 100  MQCLDYETEDSYRFTVYATDT----LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIP 155
            +  LD E    Y  T+ A D+    L  ++  + I V +VND  PRF  P+Y  ++P   
Sbjct: 2455 VVPLDREQTSVYHLTLIAQDSSPTELRASAVNLTIFVTDVNDNAPRFSSPRYTAYVP--- 2511

Query: 156  LADLTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSIN-DSGHISIVDLSALNTSTI 212
                 PG  +   +A D D G+  R+   L+G   + F+I+ +SG I      A + ++ 
Sbjct: 2512 -GATKPGDFVFGAKAMDDDDGENSRIVYRLQGIDAEKFAIDSNSGVIRATRELANDETSY 2570

Query: 213  QLVVVATDTGNPPRQASVPAIMHFPE 238
            QL + A+D G  P+  +   ++H  E
Sbjct: 2571 QLQIQASDCGTNPQSVTADLVIHLWE 2596



 Score = 58.9 bits (141), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 63/214 (29%), Positives = 106/214 (49%), Gaps = 19/214 (8%)

Query: 25  RYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVT-------TNKPRDLRV 77
           +YA   L V+    +    +FS++   V+  EN P   ++ T++       TN       
Sbjct: 527 KYASTHLKVTVLDENDEAPRFSQSVLEVTLSENTPPQSLVATLSAVDNDQGTNGSVAYSF 586

Query: 78  KYWLSNDYGERFSISR-QGDISLMQCLDYETEDSYRFTVYATDTL---MTTSATVNISVV 133
              +S DY + F++    G ++    LD ET   YR  V A D      +++ATV ++V 
Sbjct: 587 HSSVSRDYPKTFALDGLTGQLTTKIGLDRETIGEYRILVIAKDQGSPPQSSTATVVLTVQ 646

Query: 134 NVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMF 191
           +VND  P F YP +   +P IP  D  PG+ +G+V A D D  +  +V  SL    E +F
Sbjct: 647 DVNDNSPVF-YP-WRYLMP-IP-EDAPPGTSVGRVTATDADARENAQVRYSLESGGEGLF 702

Query: 192 SIND-SGHISIV-DLSALNTSTIQLVVVATDTGN 223
           ++++ +G I++   L A + +  +L + A DTG+
Sbjct: 703 AVDERTGEITLQGSLRAAHKTLYELSISAKDTGD 736



 Score = 55.8 bits (133), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 47/158 (29%), Positives = 81/158 (51%), Gaps = 12/158 (7%)

Query: 72   PRDLRVKYWLSNDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDTL---MTTSAT 127
            P + +V+Y+L     + F I +  GDI L++ LD E+   Y  T+ A DT    +T S  
Sbjct: 2322 PYNDQVRYFLKEGDTDLFRINASTGDIFLLRPLDRESVPEYTLTLVAMDTGSPPLTGSGI 2381

Query: 128  VNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRG 185
            V I V++VND  P F   +Y+  +    ++    G+ + K  A D D+G   ++T  L G
Sbjct: 2382 VRIVVLDVNDHSPEFNRQEYKATVSENSVS----GTWVAKPHATDKDEGLNAKITYRLLG 2437

Query: 186  PYEKMFSIN-DSGHI-SIVDLSALNTSTIQLVVVATDT 221
               + F+ + ++G + ++V L    TS   L ++A D+
Sbjct: 2438 ENSERFTADSETGEVFTVVPLDREQTSVYHLTLIAQDS 2475



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 44/138 (31%), Positives = 65/138 (47%), Gaps = 6/138 (4%)

Query: 95  GDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHI 154
           G IS   CLD E + SY   + A   L     +VN++V +VND  PRF  P+ E+     
Sbjct: 833 GTISAAGCLDREQQASYSLQLSARAGLAYGHTSVNVTVQDVNDNPPRF--PKGEIGDEVF 890

Query: 155 PLADLTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSINDSGHISIVD--LSALNTS 210
              +   G  +    A D D G   R+T SL     + F + ++  I  +D  + A   +
Sbjct: 891 LEENAAVGQEVCLARARDRDAGGNARITYSLTHNPGEQFRVTENSGIIYLDKPIRAPPGT 950

Query: 211 TIQLVVVATDTGNPPRQA 228
            + L V A+D+GNPP  A
Sbjct: 951 VLNLEVQASDSGNPPLSA 968



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 59/230 (25%), Positives = 107/230 (46%), Gaps = 24/230 (10%)

Query: 13   LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKP 72
            L+V A           AT++VS    +    QF++  +SV+  EN  +   ++ +T++  
Sbjct: 2781 LIVEARDQGQPSLTGTATVLVSVLDKNDNPPQFTR-LFSVNVTENAEIGTFVIRITSSD- 2838

Query: 73   RDL----RVKYWLSNDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDTLMTTSAT 127
            RD+     V Y  +++ G++F++ S  G++++   LD E +D Y   +   D     +  
Sbjct: 2839 RDIGQNANVTYSFTDNPGKKFAMDSLSGNVTVDGHLDREEQDEYLLKLVVADGAWQAATV 2898

Query: 128  VNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDK---GDRVTLSLR 184
            + I++ + ND  P F    Y    P +      P + +G+V A D DK      ++ SL 
Sbjct: 2899 LTITIQDQNDNPPEFEQDSYRFHFPEL----QPPVAHVGQVAAIDRDKQGPNSVISYSLL 2954

Query: 185  GPYEKMFSINDS-GHI-SIVDLSALNT-------STIQLVVVATDTGNPP 225
             P + +F+++ + G + S   L   +T       +   L VVATD G PP
Sbjct: 2955 QPSD-LFTVDPATGDVFSKKSLRYKHTHRPNSPENLYSLTVVATDNGKPP 3003



 Score = 48.5 bits (114), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 47/144 (32%), Positives = 68/144 (47%), Gaps = 14/144 (9%)

Query: 95   GDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHI 154
            G ++L + LD E+ + Y   V A D L  T   + I V + ND  P F+   Y   +P  
Sbjct: 1818 GQLTLAEALDRESREKYVLKVRADDGLQHTDIALTIQVTDTNDNAPMFQSSAYSFDVPE- 1876

Query: 155  PLADLTPGSVIGKVEAADGDK-GDRVTLS---LRGPYEKMFSINDSGHISIVDLSA-LNT 209
               ++  GS IG+V A D D  G    LS   +      +FS+N S    +  L+A L+ 
Sbjct: 1877 ---NVPRGSRIGQVVATDADADGPNSQLSYALISDWANDVFSLNPS--TGVFTLTATLDY 1931

Query: 210  STIQ---LVVVATDTGNPPRQASV 230
              +Q   LVV ATD G P   ++V
Sbjct: 1932 EQVQHYILVVQATDGGIPALSSTV 1955



 Score = 47.4 bits (111), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 59/223 (26%), Positives = 100/223 (44%), Gaps = 37/223 (16%)

Query: 45  FSKNEYSVSALENLPVNYVLLTV-TTNKPRD--LRVKYWLSNDYGERFSISRQ-GDISLM 100
           F +++Y V+  E+ PV   +LTV  T+K  +   R+ Y+L  D   +F+I  + G I+ +
Sbjct: 212 FQQSDYVVALNESAPVGTTVLTVHATDKDSEDNSRLTYYLP-DIERQFTIDPETGTITTV 270

Query: 101 QCLDYETED-------------SYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRY 144
           + LD   +              S   TV+A D           V +++++ ND DP  ++
Sbjct: 271 EPLDCPQQSCATGTRIAGGCPKSCVITVFARDHGSPRQDGRTYVTVNLLDANDHDPEIKF 330

Query: 145 PQYELFLPHIPL-----ADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYE-KMFSINDS 196
                + P  P       +    S++  V   D D+G     T+ +R   E   F +++S
Sbjct: 331 S----YFPSTPGYATVDENAAKDSIVAAVAVIDNDEGLNGETTVEIRAGNELGHFRLDNS 386

Query: 197 GHISIVDLSA-LNTSTI---QLVVVATDTGNPPRQASVPAIMH 235
               IV ++  L+   I    L VVATD G PPR A+   ++H
Sbjct: 387 QSFDIVYVNGRLDREEIPKYNLTVVATDKGTPPRSATAYLVIH 429



 Score = 46.6 bits (109), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 54/197 (27%), Positives = 85/197 (43%), Gaps = 18/197 (9%)

Query: 45   FSKNEYSVSALENLPVN---YVLLTVTTNKPRDLRVKYWLSNDYGE-RFSISRQGDISLM 100
            F    Y  S LE+ PVN   + L  +  +  R+ RV Y +++   E RF I   G + + 
Sbjct: 986  FKLTSYETSLLESTPVNDRFFSLTAIDVDLGRNGRVLYSVTDGNAEDRFGIFPDGQLYVK 1045

Query: 101  QCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLA 157
              LD E  D Y   V ATD      ++   V + V++ ND  P F    +   L      
Sbjct: 1046 NVLDREERDYYALEVTATDQGNPSRSSVVPVVVHVIDENDNAPEFANSSFVFHL----RE 1101

Query: 158  DLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKM-FSIN-DSGHISIV-----DLSALNTS 210
            +  P + +GK+ A+D D G    L    P  +  F+++  +G +  +     +L   NT 
Sbjct: 1102 NEPPDTFVGKLLASDRDAGRNADLVFSLPASQQDFAVDPRNGFVKSLRVFDRELLVANTG 1161

Query: 211  TIQLVVVATDTGNPPRQ 227
            T  +   AT T N P +
Sbjct: 1162 TSYIAFEATVTDNGPNR 1178



 Score = 46.2 bits (108), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 42/108 (38%), Positives = 54/108 (50%), Gaps = 9/108 (8%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTV-TTNKPRDLRVKYWLSNDYG-ER--FSISRQ-GDIS 98
            QF +  Y V   E       LL V TT+    L    + S + G ER  F+I    G IS
Sbjct: 1198 QFQRLPYKVQVNEGAATGTQLLKVYTTDADEGLNGDVFYSLEEGNERGHFAIDEATGQIS 1257

Query: 99   LMQCLDYETEDSYRFTVYATD----TLMTTSATVNISVVNVNDWDPRF 142
            L + LD ET DSY  TV A D    T +++S TV + V++ ND  PRF
Sbjct: 1258 LTKELDRETSDSYVLTVVAHDAGLETRLSSSTTVRVEVLDENDNVPRF 1305



 Score = 46.2 bits (108), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 51/187 (27%), Positives = 81/187 (43%), Gaps = 29/187 (15%)

Query: 76   RVKYWLSNDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNIS 131
            +V Y+L ND+ + F + S  G+IS    LD E   SY   V A D     +T +ATV +S
Sbjct: 2743 QVSYYLVNDFTDTFVVDSDTGEISTNAKLDREEIASYELIVEARDQGQPSLTGTATVLVS 2802

Query: 132  VVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDR--VTLSLRGPYEK 189
            V++ ND  P+F      LF  ++   +   G+ + ++ ++D D G    VT S      K
Sbjct: 2803 VLDKNDNPPQFT----RLFSVNV-TENAEIGTFVIRITSSDRDIGQNANVTYSFTDNPGK 2857

Query: 190  MFSIND-------SGHIS-----------IVDLSALNTSTIQLVVVATDTGNPPRQASVP 231
             F+++         GH+            +V   A   +T+  + +     NPP      
Sbjct: 2858 KFAMDSLSGNVTVDGHLDREEQDEYLLKLVVADGAWQAATVLTITIQDQNDNPPEFEQDS 2917

Query: 232  AIMHFPE 238
               HFPE
Sbjct: 2918 YRFHFPE 2924



 Score = 43.1 bits (100), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 54/240 (22%), Positives = 101/240 (42%), Gaps = 22/240 (9%)

Query: 13  LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVT-TNK 71
           L V A       R A A L++     +  E  F ++EYS    E  P    + +++ T+ 
Sbjct: 408 LTVVATDKGTPPRSATAYLVIHVNDVNDHEPVFQQSEYSAVLSELSPTGSFVASISATDA 467

Query: 72  PRDLRVKYWLSNDYGER---FSISRQGDI---SLMQCLDYETEDSYRFTVYATD---TLM 122
              L  + +   D G     F+I +   +        LD E + S    V A D      
Sbjct: 468 DSGLNARIYYDFDSGNEQGWFAIDQDTGLVTTXXXXTLDREVQGSVELHVSARDGGPNPK 527

Query: 123 TTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTL- 181
             S  + ++V++ ND  PRF     E+ L      +  P S++  + A D D+G   ++ 
Sbjct: 528 YASTHLKVTVLDENDEAPRFSQSVLEVTLSE----NTPPQSLVATLSAVDNDQGTNGSVA 583

Query: 182 -----SLRGPYEKMFSIND-SGHISI-VDLSALNTSTIQLVVVATDTGNPPRQASVPAIM 234
                S+   Y K F+++  +G ++  + L        +++V+A D G+PP+ ++   ++
Sbjct: 584 YSFHSSVSRDYPKTFALDGLTGQLTTKIGLDRETIGEYRILVIAKDQGSPPQSSTATVVL 643



 Score = 42.7 bits (99), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 30/96 (31%), Positives = 48/96 (50%), Gaps = 8/96 (8%)

Query: 30   TLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTT-----NKPRDL-RVKYWLSN 83
            TL++S  G +     F+ + Y V   EN PVN  +LTV+      + P  + R K    N
Sbjct: 3129 TLVIS--GENKHAPTFAADSYQVRVPENEPVNTTILTVSATDDDQHGPNGMIRYKISAGN 3186

Query: 84   DYGERFSISRQGDISLMQCLDYETEDSYRFTVYATD 119
            +  E F  +  G +++++ LDY+    YR  + ATD
Sbjct: 3187 ERNEFFVHAITGAVTILEPLDYDLVQEYRLNITATD 3222



 Score = 41.6 bits (96), Expect = 0.63,   Method: Compositional matrix adjust.
 Identities = 51/201 (25%), Positives = 84/201 (41%), Gaps = 26/201 (12%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTTNKP-----RDLRVKYWLSNDYGERFSISRQGDIS 98
            +F  NE  +S LE  P N  L+             +L       N     +     G + 
Sbjct: 1304 RFVDNESRISVLETTPTNTELVRFKATDDDLGPNSELAFAISAGNRRDTFYVDPLTGTLY 1363

Query: 99   LMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQ-----YELF 150
            L + LDYE  + Y   V  +D     +T+  ++ + V++ ND  P F          E  
Sbjct: 1364 LKKPLDYEELERYTLNVTCSDGGHPRLTSVTSLTVEVIDANDNPPVFPNTAIARQIREGI 1423

Query: 151  LPHIPLADLTPGSVIGKVEAADGDKGDRVTLSL--RGPYEKM--FSINDSGHI--SIVDL 204
            L H P+  +T        E  D ++   VT S+  + P +++  F IN S  +  +++ +
Sbjct: 1424 LVHTPIVTIT-------AEDPDSNENGVVTYSIASQDPEDQLRRFGINPSTGVIHTLLPI 1476

Query: 205  SALNTSTIQLVVVATDTGNPP 225
                  T +LVVVATD+ +PP
Sbjct: 1477 DREEVDTYKLVVVATDSAHPP 1497



 Score = 41.6 bits (96), Expect = 0.71,   Method: Compositional matrix adjust.
 Identities = 42/138 (30%), Positives = 66/138 (47%), Gaps = 16/138 (11%)

Query: 103 LDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADL 159
           LD E    Y  TV ATD      + +A + I V +VND +P F+  +Y        L++L
Sbjct: 398 LDREEIPKYNLTVVATDKGTPPRSATAYLVIHVNDVNDHEPVFQQSEYSAV-----LSEL 452

Query: 160 TP-GSVIGKVEAADGDKG--DRVTLSL-RGPYEKMFSIN-DSGHISIVDLSALN---TST 211
           +P GS +  + A D D G   R+      G  +  F+I+ D+G ++      L+     +
Sbjct: 453 SPTGSFVASISATDADSGLNARIYYDFDSGNEQGWFAIDQDTGLVTTXXXXTLDREVQGS 512

Query: 212 IQLVVVATDTGNPPRQAS 229
           ++L V A D G  P+ AS
Sbjct: 513 VELHVSARDGGPNPKYAS 530



 Score = 38.1 bits (87), Expect = 7.1,   Method: Compositional matrix adjust.
 Identities = 45/181 (24%), Positives = 78/181 (43%), Gaps = 16/181 (8%)

Query: 56   ENLPVNYVLLTVTTNKPR---DLRVKYWLSN-DYGERFSIS-RQGDISLMQCLDYETEDS 110
            E++P   V+  +T   P+      + Y ++  + G+   I    G++ +    DYET   
Sbjct: 2615 EDVPEGRVITKLTATTPKIGAASNLVYGMAGGNVGDALKIDPHTGEVLVASGFDYETAPY 2674

Query: 111  YRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGK 167
            Y   V   D+    + +   + ++V + ND  P      Y   +P     D  P   +GK
Sbjct: 2675 YEAWVEVRDSDTPALRSVVQLLVNVTDANDNAPIMEASIYNATVPE----DEYPPLFVGK 2730

Query: 168  VEAADGDKGD--RVTLSLRGPYEKMFSIN-DSGHISI-VDLSALNTSTIQLVVVATDTGN 223
            V A D D G+  +V+  L   +   F ++ D+G IS    L     ++ +L+V A D G 
Sbjct: 2731 VSAKDRDSGENGQVSYYLVNDFTDTFVVDSDTGEISTNAKLDREEIASYELIVEARDQGQ 2790

Query: 224  P 224
            P
Sbjct: 2791 P 2791


>gi|390459338|ref|XP_003732280.1| PREDICTED: protocadherin gamma-C4-like [Callithrix jacchus]
          Length = 871

 Score = 70.9 bits (172), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 65/230 (28%), Positives = 104/230 (45%), Gaps = 22/230 (9%)

Query: 13  LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKP 72
           LV+ A+   N  R   A L VS    +     F ++ Y +S LE+ P   VL+ +  + P
Sbjct: 210 LVLTAVDGGNPPRSGTAELRVSVLDVNDNAPAFQQSSYRISVLESAPAGMVLIQLNASDP 269

Query: 73  RDL----RVKYWLSNDYGER----FSI-SRQGDISLMQCLDYETEDSYRFTVYATD---T 120
            DL     V ++ S    +R    FS+    G ++L+  LD+E+E+ Y F V A D    
Sbjct: 270 -DLGPSGNVTFYFSGHTPDRVRNLFSLHPTTGKLTLLGPLDFESENYYEFDVRARDGGSP 328

Query: 121 LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVT 180
            M    ++ + +++VND  P          LP        PG+V+  +   D D G    
Sbjct: 329 AMEQHCSLRVDLLDVNDNAPYITVTSELGTLPE----SAEPGTVVALISVQDPDSGSNGD 384

Query: 181 LSLRGPYEKMFSINDS--GHISIVDLSALN---TSTIQLVVVATDTGNPP 225
           +SLR P    F++  +     S+V    L+    S+  ++V A+D GNPP
Sbjct: 385 VSLRIPDHLPFALKSAFRNQFSLVTAGPLDREAKSSYDIMVTASDAGNPP 434



 Score = 47.4 bits (111), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 45/169 (26%), Positives = 78/169 (46%), Gaps = 27/169 (15%)

Query: 77  VKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVV 133
           + + L + +  +FS+   G       LD E + SY   V A+D     ++T  T+ +++ 
Sbjct: 393 LPFALKSAFRNQFSLVTAGP------LDREAKSSYDIMVTASDAGNPPLSTHRTIFLNIS 446

Query: 134 NVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMF 191
           +VND  P F    +E+F+P     +  PG ++  + A+D D G    ++ SL  P  +  
Sbjct: 447 DVNDNPPSFFQRSHEVFVPE----NNRPGDLLCSLAASDPDSGLNALISYSLLEPRNR-- 500

Query: 192 SINDSGHISIVDLSAL----------NTSTIQLVVVATDTGNPPRQASV 230
            ++ S  IS+   +             T T+Q  V A D GNPP  ++V
Sbjct: 501 DVSASSFISLNPQTGAVHATRSFDYEQTQTLQFEVQARDRGNPPLSSTV 549



 Score = 44.7 bits (104), Expect = 0.085,   Method: Compositional matrix adjust.
 Identities = 50/190 (26%), Positives = 83/190 (43%), Gaps = 15/190 (7%)

Query: 95  GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYE--L 149
           G +   +  DYE   + +F V A D     ++++ TV + V+++ND  P    P+     
Sbjct: 515 GAVHATRSFDYEQTQTLQFEVQARDRGNPPLSSTVTVRLFVLDLNDNAPAVLRPRARPGS 574

Query: 150 FLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIND-SGHISIVDLS 205
             P      +  G +I KV A D D G    +S   L  P   +F+++  +G +      
Sbjct: 575 LCPQALPPSVGAGHLITKVTAVDLDSGYNAWVSYQLLEAPDPSLFAVSRYAGEVRTAVPI 634

Query: 206 ALNTSTIQLVVVATDTGNPPRQASVPAIMHFPE---AIVQ--QASSKLNSGTSSTVLIIL 260
             +    +LV+V  D+G+PP   SV  ++   E    +V   + SS    G S   L  L
Sbjct: 635 PADLPPQKLVIVVKDSGSPPLSTSVTLLVSLEEDTHPVVPDLRESSAPREGESRLTL-YL 693

Query: 261 GVVLIVLGFV 270
            V L+ + FV
Sbjct: 694 AVSLVAICFV 703


>gi|345548553|gb|AEO12553.1| Lefftyrin, partial [Oscarella carmela]
          Length = 14757

 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 73/237 (30%), Positives = 110/237 (46%), Gaps = 21/237 (8%)

Query: 12   TLVV---RAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVT 68
            TLVV   RA+   N   YA  TL V+    + RE  F  +   V+  E +P+ + +  V+
Sbjct: 4525 TLVVSATRAVPGRNLTGYA--TLFVTVGDVNDREPSFLSSFKEVNVSEGVPIGFEITQVS 4582

Query: 69   TNKP----RDLRVKYWLS-NDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDT--- 120
                      +   Y L+  ++   FSIS+ G IS+   L+ E    YR TV A D    
Sbjct: 4583 AEDTDAGLNGVVTAYNLTKGNFDGVFSISQTGRISVSNSLNREETGFYRLTVAAIDGGSP 4642

Query: 121  LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVT 180
             +T ++ + ++V++VND DPRF+  +Y   +      D   GSV G V A D D G    
Sbjct: 4643 ALTGNSIIAVNVLDVNDNDPRFQQAKYVFNVSE----DALIGSVAGAVGAVDIDSGLNGQ 4698

Query: 181  LSLRGPYE-KMFSINDSGHISIV--DLSALNTSTIQLVVVATDTGNPPRQASVPAIM 234
            +    P   + FS++ +  I  V   L  +    I   V ATD+G P R +S  A+M
Sbjct: 4699 VKYSAPSSGRYFSVDPANGIMTVSGSLDRVKDPVITFAVTATDSGAPSR-SSFTAVM 4754



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 63/199 (31%), Positives = 101/199 (50%), Gaps = 14/199 (7%)

Query: 11   ITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTT- 69
            ITLVV A+       ++  T++V+    +    +F++  YS S LEN  V   +L+V   
Sbjct: 3999 ITLVVSAVDAGIPRLHSTTTVVVNITDVNDNAPEFTRRTYSASILENSTVGQFVLSVQAE 4058

Query: 70   --NKPRDLRVKYWLSN-DYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATD---TLM 122
              +   +  V+Y LS+ + G  FSI +  GDI     LD+ET +SYR TV A D     +
Sbjct: 4059 DVDSGANGLVRYELSSGNVGGTFSIDAVSGDIFTALSLDFETRESYRMTVVARDGGSPSL 4118

Query: 123  TTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS 182
            ++S+TV +++ N+ D  P F    Y+  +    L D    S +G+V A  G+K   V +S
Sbjct: 4119 SSSSTVEVNINNLIDTPPLFDQDVYKFSI----LEDRKSRSFVGQVSAKTGEKNGDVAVS 4174

Query: 183  --LRGPYEKMFSINDSGHI 199
              + G     ++IN +G I
Sbjct: 4175 YEIEGTENGSYAINATGVI 4193



 Score = 58.2 bits (139), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 60/199 (30%), Positives = 88/199 (44%), Gaps = 18/199 (9%)

Query: 45   FSKNEYSVSALENLPVNYVLLTV---TTNKPRDLRVKYWLSNDYGERFSISRQGDISLMQ 101
            F ++ Y  S LE+      +  V   T  K  D+ V Y +       ++I+  G I L+ 
Sbjct: 4138 FDQDVYKFSILEDRKSRSFVGQVSAKTGEKNGDVAVSYEIEGTENGSYAINATGVIFLLA 4197

Query: 102  CLDYETEDSYRFTVYAT-----DTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
             LD E  D Y  TV A+        + +SA V + V++VND  P F    Y+  +     
Sbjct: 4198 MLDREAVDLYNLTVAASIPGSDGRFLRSSAAVTVVVLDVNDHSPIFSDFLYKFLVSE--- 4254

Query: 157  ADLTPGSVIGKVEAAD-GDKGDRVTL-SLR---GPYEKMFSINDSGHISIV-DLSALNTS 210
             D + GS +G+VEA D  D G    + S R   G     FS++ SG I +   L   N S
Sbjct: 4255 -DASVGSSVGRVEAIDTNDVGVNAAIKSYRFTSGNSRNHFSVSSSGIIEVARQLDHENVS 4313

Query: 211  TIQLVVVATDTGNPPRQAS 229
               L + A D+G P   A+
Sbjct: 4314 VFNLTIEADDSGLPSLTAT 4332



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 53/185 (28%), Positives = 82/185 (44%), Gaps = 10/185 (5%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGERFSISRQGDISLMQCLD 104
            FS   YS S LEN P    L+TV+ +   D  V Y   +   +    S  G ++  + LD
Sbjct: 8677 FSSLLYSASILENRPPGQSLVTVSASDKDDDNVSYRFRDSVTDFTLNSTSGVVTTARALD 8736

Query: 105  YETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSV 164
             ET+  Y  TV ATD   +   T  I+V + ND  P F            P+     G+V
Sbjct: 8737 RETKAIYNLTVIATDGARSAEVTAIITVQDDNDNAPEFAKSYRANVSESAPV-----GTV 8791

Query: 165  IGKVEAADGDKG--DRVTLSLRGPYEKMFSINDSGHISIV--DLSALNTSTIQLVVVATD 220
            +    A+D D G  + V+ ++ GP    F +N +  +  V  DL  L+  ++   + AT+
Sbjct: 8792 VLTASASDRDVGINEEVSYAV-GPLSDFFEVNSTTGVLTVARDLKPLSGRSLTFELTATN 8850

Query: 221  TGNPP 225
              + P
Sbjct: 8851 ANSSP 8855



 Score = 55.5 bits (132), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 50/156 (32%), Positives = 77/156 (49%), Gaps = 13/156 (8%)

Query: 92   SRQGDISLMQCLDYETEDSYRFTVYATDTLMT----TSATVNISVVNVNDWDPRFRYPQY 147
            S  G++++   LD E   SYR TV AT++  T    +SA V + +++VND  P+     Y
Sbjct: 1364 STSGELTVGNSLDREKTSSYRLTVTATNSFATFGRSSSADVIVHILDVNDNTPQLEKANY 1423

Query: 148  ELFLPHIPLADLTPGSVIGKVEAADGDKGDR--VTLSLRGPYEKMFSI-NDSGHISIV-D 203
            E  +    + +   G+ +  V+A D D G    VT SL  P   +F+I N SG + +   
Sbjct: 1424 EASV----VENSPTGTSVLTVKATDDDIGSNGAVTYSL-SPSSSLFNIDNTSGVLEVTGS 1478

Query: 204  LSALNTSTIQLVVVATDTGNPPRQASVPAIMHFPEA 239
            L     S   L V+A D G+P R A+  A +   +A
Sbjct: 1479 LDREKQSVYSLNVIAVDGGDPSRTATARATVTVADA 1514



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 43/141 (30%), Positives = 73/141 (51%), Gaps = 17/141 (12%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLR------VKYWL-SNDYGERFSISRQGD 96
            +F++  YS +  EN+ +     T+TT    DL       V Y L S D    F +S  G 
Sbjct: 3725 EFARLAYSEAVKENISIGS---TITTLSAEDLDAGSNGDVHYVLGSGDEDGVFKLSDAGS 3781

Query: 97   ISLMQCLDYETEDSYRFTVYATDTL---MTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
            +  ++ LD+ET+ SY+ TV+A D     + +S  V I+V++V+D  P+F   Q+++ +  
Sbjct: 3782 LVTVKSLDHETKISYQLTVFAVDGGRPPLNSSVLVAITVIDVDDRAPQFSQGQFDISVSE 3841

Query: 154  IPLADLTPGSVIGKVEAADGD 174
                +++ GS +  V A D D
Sbjct: 3842 ----NVSVGSTLASVRALDPD 3858



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 61/193 (31%), Positives = 95/193 (49%), Gaps = 25/193 (12%)

Query: 56   ENLPVNYVLLTVTT---NKPRDLRVKYWL---SNDYGERFSISRQ-GDISLMQCLDYETE 108
            EN PV   L  +T    +  R  +V Y+L   S+  G  F I  Q G++      DYE  
Sbjct: 6423 ENEPVGSSLAFITATDEDNGRSGQVTYFLKATSDSVG--FEIDHQTGELLSNATFDYELS 6480

Query: 109  DS-YRFTVYATDTL---MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSV 164
               +  TV A+D+    +++S TVN+S+V++ND  PRF    + + +       ++  SV
Sbjct: 6481 PRLHSLTVVASDSGAPPLSSSVTVNVSIVDLNDNSPRFETNAFTVDVKE----SVSLTSV 6536

Query: 165  IGKVEAADGDK---GDRVTLSLRGPYEKMFSINDS-GHISIV-DLSALNTSTIQLVVVAT 219
            I  V+A D D    GD V   + G  E + ++N S G +++V  L    T   +  + AT
Sbjct: 6537 IASVKATDSDSGLNGDVVYEIVGGNEESVVAVNRSTGALTVVRSLDRERTDQYRFRIKAT 6596

Query: 220  DTGNPPRQASVPA 232
            D G+PP   S+PA
Sbjct: 6597 DLGSPP---SLPA 6606



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 62/203 (30%), Positives = 99/203 (48%), Gaps = 24/203 (11%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDLR----VKYWL-SNDYGERFSI-SRQGDIS 98
            F+     V   EN+ V   L+ +     RDL     V Y + + D   RF I S  G ++
Sbjct: 6307 FATKSQRVDLFENVTVG-TLVALVNATDRDLGLNGVVAYMIETGDPDGRFLIDSVTGALT 6365

Query: 99   LMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFL-PHI 154
            + Q LD E++  Y+  V A D     + ++A++ ++V++VND  PRF  P   LFL  + 
Sbjct: 6366 VAQTLDRESKAEYQLEVLAEDQGIPSLQSTASITVNVLDVNDNAPRFSVPPGSLFLNENE 6425

Query: 155  PLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKM-FSIN-DSGHI---SIVDLSAL 207
            P+     GS +  + A D D G   +VT  L+   + + F I+  +G +   +  D   L
Sbjct: 6426 PV-----GSSLAFITATDEDNGRSGQVTYFLKATSDSVGFEIDHQTGELLSNATFDYE-L 6479

Query: 208  NTSTIQLVVVATDTGNPPRQASV 230
            +     L VVA+D+G PP  +SV
Sbjct: 6480 SPRLHSLTVVASDSGAPPLSSSV 6502



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 66/249 (26%), Positives = 102/249 (40%), Gaps = 33/249 (13%)

Query: 16   RAIQYDNQDRYAL--------ATLIVSKAGTSLRELQ-------FSKNEYSVSALENLPV 60
            RA+ Y++   Y+L        +  + S A  S+R L        F    ++V   EN PV
Sbjct: 4932 RAVDYESVTNYSLIISASDGGSPTLSSTAAVSVRVLDTNDNPPVFVGGPFTVKVRENTPV 4991

Query: 61   NYVLLTVTTNKP-----RDLRVKYWLSNDYGERFSISRQGDISLMQC-LDYETEDSYRFT 114
            +  + TV+          DL        + G+ F  S  G + +    LD E+   +  +
Sbjct: 4992 STSVFTVSAEDADSGINADLAYSIVAGAEGGQLFINSSSGILRVGGAGLDRESNPHFVLS 5051

Query: 115  VYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAA 171
            +   D     +T + TVN++V +VND  P F   QY    P     +++  S++G V A 
Sbjct: 5052 LEVRDRGSPSLTAATTVNVTVEDVNDEAPVFTEIQYVFHAPE----NVSSNSIVGLVSAT 5107

Query: 172  DGDKGDRVTLSL---RGPYEKMFSINDS-GHISI-VDLSALNTSTIQLVVVATDTGNPPR 226
            D D G    +      G     FS+N   G I     L   N +   L V+ATD G P  
Sbjct: 5108 DNDAGTNAFVKYSITEGNANGTFSVNPFLGEIETNRALDRENVAAYSLKVLATDGGTPSL 5167

Query: 227  QASVPAIMH 235
             +SV  I+ 
Sbjct: 5168 SSSVDVIVR 5176



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 62/205 (30%), Positives = 98/205 (47%), Gaps = 26/205 (12%)

Query: 37   GTSLRELQ--FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKY-WLSNDYGERFSISR 93
            G   R+L+  F+++ Y+ S  ENL  + VL  V  +      V+Y  +S +   +FSIS 
Sbjct: 9690 GIQSRDLKPVFNQSSYTASVEENLAPSAVLRVVALSSGS---VRYSIISGNSNSKFSISS 9746

Query: 94   QGDISLMQCLDYETEDSYRFTV--------YATDTLMTTSATVNISVVNVNDWDPRFRYP 145
             G+IS+ + LD E ++ Y  TV        +A +          I+V++ ND  P    P
Sbjct: 9747 NGEISVQKSLDREIQNLYLLTVRAVAFDPAFAPNGSSPVEVNATINVLDDNDNRPVITDP 9806

Query: 146  -QYELFLPHIPLADLTPGSVIGKVEAADGD--KGDRVTLSL-RGPYEKMFSI-NDSGHIS 200
             Q   F+     A +T    +  + A D D  +  R+  SL +     +F I N+SG IS
Sbjct: 9807 GQQTAFVGT--AAQVT----VVTIRAVDKDVRENGRIVYSLVKSNGRPLFQIGNESGVIS 9860

Query: 201  IVDLSALNTSTIQLVVVATDTGNPP 225
               +   N S +Q+VV+A+D G PP
Sbjct: 9861 TA-VELRNQSLVQVVVIASDLGKPP 9884



 Score = 51.6 bits (122), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 59/200 (29%), Positives = 95/200 (47%), Gaps = 17/200 (8%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTV-TTNKPRDLR--VKYWLSNDYGERF-SISRQ-GDIS 98
            +F  N ++V   E++ +  V+ +V  T+    L   V Y +     E   +++R  G ++
Sbjct: 6517 RFETNAFTVDVKESVSLTSVIASVKATDSDSGLNGDVVYEIVGGNEESVVAVNRSTGALT 6576

Query: 99   LMQCLDYETEDSYRFTVYATDTLMTTS----ATVNISVVNVNDWDPRFRYPQYELFLPHI 154
            +++ LD E  D YRF + ATD     S    A VN++V +VND  P F    Y+  +   
Sbjct: 6577 VVRSLDRERTDQYRFRIKATDLGSPPSLPAYAFVNLTVEDVNDNPPVFDRSSYQTRITE- 6635

Query: 155  PLADLTPGSVIGKVEAADGDKGDR--VTLSL-RGPYEKMFSI-NDSGHISIVDLSALNTS 210
                   GS++  V A+D D G    VT S+  G    +F I   SG I ++     + S
Sbjct: 6636 ---GTDVGSIVASVSASDADSGSNGIVTYSIVSGNKLNVFEIVASSGEIKLLSPFPRHVS 6692

Query: 211  TIQLVVVATDTGNPPRQASV 230
               LV+ A+D G P  +A+V
Sbjct: 6693 LFSLVLQASDGGLPSLKATV 6712



 Score = 51.6 bits (122), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 59/212 (27%), Positives = 104/212 (49%), Gaps = 34/212 (16%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVT-TNKPRDLRVKYWLSNDYGERFSI---SRQGDISLM 100
            F++  Y+ SA E+  +   ++TV+ T+  R +  K   +   G++ S    +  G I+L 
Sbjct: 8358 FNQTIYNASASEDAGLGNSIVTVSATDGDRGVNAKILYAITSGDQGSFDVNNETGVITLA 8417

Query: 101  QCLDYETEDSYRFTVYATD-----TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIP 155
              LD+E  ++Y+  + A +     +++  SATVNI+V++VND  P F     ++F     
Sbjct: 8418 AALDFERVENYQLVITARNPSSSSSILPRSATVNIAVLDVNDNAPIFD----QMFYRWEI 8473

Query: 156  LADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSGHISIV-----DLSALNT- 209
            L ++T G     V+A D D G  +   +R      +S+ D+     +     DLS L T 
Sbjct: 8474 LENVTIGKAGFSVQATDADSG--INSLIR------YSLTDASSTFTIDHRFGDLSTLKTL 8525

Query: 210  -----STIQLVVVATDTGNP--PRQASVPAIM 234
                 ++  L V+A D+G+P     A+V AI+
Sbjct: 8526 DRETQASYNLTVLAVDSGSPRLTGTATVAAIL 8557



 Score = 51.2 bits (121), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 58/200 (29%), Positives = 91/200 (45%), Gaps = 20/200 (10%)

Query: 45   FSKNEYSVSALEN-LPVNYVLLTVTTNKPRDLRVKYW---LSNDYGERFSI-SRQGDISL 99
            F+++ Y  +  EN LP   V +   ++       K     +  D  + FSI S  G +S+
Sbjct: 3621 FNQSAYISAVSENALPGRIVTIVAASDADSGSNAKLTFRIIDGDRNDVFSIGSTSGIVSV 3680

Query: 100  MQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
               LD E  + Y  TV A D     +  +  VNI+V ++ND  P F    Y   +     
Sbjct: 3681 KGDLDREIIEGYSLTVEARDQGSPSLRNTTLVNITVADINDNFPEFARLAYSEAVKE--- 3737

Query: 157  ADLTPGSVIGKVEAAD---GDKGDRVTLSLRGPYEKMFSINDSGHISIVDLSALNTST-- 211
             +++ GS I  + A D   G  GD   +   G  + +F ++D+G  S+V + +L+  T  
Sbjct: 3738 -NISIGSTITTLSAEDLDAGSNGDVHYVLGSGDEDGVFKLSDAG--SLVTVKSLDHETKI 3794

Query: 212  -IQLVVVATDTGNPPRQASV 230
              QL V A D G PP  +SV
Sbjct: 3795 SYQLTVFAVDGGRPPLNSSV 3814



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 57/190 (30%), Positives = 84/190 (44%), Gaps = 16/190 (8%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGERFSISRQGDISLMQCLD 104
            FS   Y+V   EN  +   LL VT +     ++ Y + +     FS++  G I +   LD
Sbjct: 3521 FSPTNYAVQVQENASLGKSLLKVTASDLDGDKLLYSIPSVV--PFSVNSSGIIRVNGSLD 3578

Query: 105  YETEDSYRFTVYATDT---LMTTS--ATVNISVVNVNDWDPRFRYPQYELFLPHIPLADL 159
             +TE    F V A ++     T S  A V +++++VND  P F    Y   +    L   
Sbjct: 3579 RDTESRIVFAVNAQESRSPFRTASVPALVTVTLLDVNDNSPVFNQSAYISAVSENAL--- 3635

Query: 160  TPGSVIGKVEAADGDKGDRVTLSLR---GPYEKMFSIND-SGHISIV-DLSALNTSTIQL 214
             PG ++  V A+D D G    L+ R   G    +FSI   SG +S+  DL         L
Sbjct: 3636 -PGRIVTIVAASDADSGSNAKLTFRIIDGDRNDVFSIGSTSGIVSVKGDLDREIIEGYSL 3694

Query: 215  VVVATDTGNP 224
             V A D G+P
Sbjct: 3695 TVEARDQGSP 3704



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 56/195 (28%), Positives = 88/195 (45%), Gaps = 20/195 (10%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVT-----TNKPRDLRVKYWLSNDYGERFSISRQGDISL 99
            F+++ Y+VS  E+  V   ++TV      T     L  +    ND    F     G+++L
Sbjct: 8147 FTQSVYNVSLREDSVVGIRIITVVAADNDTGVNGQLAYRILTGNDNNTFFLDELSGNLTL 8206

Query: 100  MQCLDYETEDSYRFTVYATD----TLMTTSATVNISVVNVNDWDPRFRYPQYELFLP-HI 154
             + +DYE    Y   V A D      + ++ATV I+V + ND  P+    Q  LF P + 
Sbjct: 8207 RKSVDYEMRTLYSIVVEAKDGSLHGSLQSTATVVITVEDKNDNTPQIETSQDVLFFPENS 8266

Query: 155  PLADLTPGSVIGKVEAADGDKGDRVTLSL---RGPYEKMFSIND-SGHISIV-DLSALNT 209
            P+     G V+ +++A D D G    L+     G    +FS++  SG +SIV  L     
Sbjct: 8267 PV-----GPVLAEIKAQDRDSGKNGKLNFAITSGNNGGIFSLDSLSGQLSIVRSLDRETK 8321

Query: 210  STIQLVVVATDTGNP 224
                L V  +D+G P
Sbjct: 8322 KNYDLTVAVSDSGVP 8336



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 57/198 (28%), Positives = 87/198 (43%), Gaps = 17/198 (8%)

Query: 45    FSKNEYSVSALENLPVNYVLLT--VTTNKPRDLRVKYWLSNDYGERFSI-SRQGDISLMQ 101
             FSK  Y+ S +E+  +   + T  VT+       V + ++    E FS+ S  GDI L+ 
Sbjct: 9905  FSKPFYNFSVIESAKLGTAIGTIEVTSRNASGYSVVFRITAG-NEEFSVNSTSGDIILID 9963

Query: 102   CLDYETEDSYRFTVYAT-----DTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
              LD E   SYR  V A        +   S  VNI+V++ ND  P        +    + L
Sbjct: 9964  SLDREKVVSYRLVVEAETRSSFGGVAAASVEVNITVLDANDNSPIASV----VGNASVQL 10019

Query: 157   ADLTP-GSVIGKVEAADGDKGDRVTLSLR---GPYEKMFSINDSGHISIVDLSALNTSTI 212
                +P G +I ++ A+D D G    L  R   G + + F+++D G + +           
Sbjct: 10020 NSSSPVGVLIAQILASDNDAGPNGKLLYRISSGNFLESFNVSDDGALRLAKRLPNTNKDT 10079

Query: 213   QLVVVATDTGNPPRQASV 230
              LVV   D GNP R  +V
Sbjct: 10080 DLVVQVLDNGNPVRSTNV 10097



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 42/140 (30%), Positives = 70/140 (50%), Gaps = 16/140 (11%)

Query: 80   WLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVN 136
            + S +    FS+S  G I + + LD+E    +  T+ A D+    +T +A + I + NVN
Sbjct: 4284 FTSGNSRNHFSVSSSGIIEVARQLDHENVSVFNLTIEADDSGLPSLTATAALTIQIGNVN 4343

Query: 137  DWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSIN 194
            +  P F  P+YE+ +     A L  G+ I +V A+D D G   RV+ SL          N
Sbjct: 4344 EHAPVFSQPEYEVSIYET--AGL--GTSIVRVSASDADDGSSGRVSYSL-------VEGN 4392

Query: 195  DSGHISIVDLSALNTSTIQL 214
            ++G  ++  +S + T+T  L
Sbjct: 4393 ENGTFAVDAVSGIVTTTASL 4412



 Score = 48.9 bits (115), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 61/216 (28%), Positives = 98/216 (45%), Gaps = 19/216 (8%)

Query: 21   DNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLR-VKY 79
            DN     L+  +V    T     +F+++ Y+   LEN     ++L V   + RD+  V +
Sbjct: 9259 DNGSPRLLSATVVRVTLTEFVTTRFNQSSYNGKVLENDFPPTLILDVKLLQGRDVENVTF 9318

Query: 80   WLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDTL-------MTTSATVNISV 132
             L ++  +RF I++ G +     LD E   SY  TV  ++ L        +   +V +SV
Sbjct: 9319 LLKSNSTDRFFITKDGRLFANTSLDREETASYNLTVI-SNVLSSFPFLRKSIQVSVTVSV 9377

Query: 133  VNVNDWDPRFRYPQYELFLPHIPLADLT-PGSVIGKVEAADGDKGDR--VTLSLRGPYEK 189
             + ND  P     Q ++F    PL++ +  GS   +V A D D G    +T SL G +  
Sbjct: 9378 SDANDNIPVIE--QVDIF----PLSESSIVGSTAAQVTAKDDDFGANSFLTYSLSGTHAN 9431

Query: 190  MFSINDSGHISIVDLSALNTSTI-QLVVVATDTGNP 224
            +F++  +G I       L T     LVV  TD+G P
Sbjct: 9432 LFTVLSNGTIKTSQPLLLRTELFYSLVVTVTDSGIP 9467



 Score = 48.9 bits (115), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 96/207 (46%), Gaps = 34/207 (16%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDLR---VKYWL-SNDYGERFSISRQ-GDISL 99
            F++  Y  S  EN  V  ++ TV  N   +     V Y + S +   +F++    G I++
Sbjct: 6201 FTEASYLASIAENASVGDLVFTVRANDADEGTNGLVSYSIRSGNRDGQFTVDHSNGQIAV 6260

Query: 100  MQCLDYETEDSYRFTVYATDTL----MTTSATVNISVVNVNDWDPRF--RYPQYELFLPH 153
            ++ LD E  +SY  T+ A+D      M++SATV+I V++ ND  P F  +  + +LF   
Sbjct: 6261 LKPLDREAVNSYVLTILASDFASVNPMSSSATVSIQVLDSNDNAPVFATKSQRVDLF--- 6317

Query: 154  IPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSIND----------SGHISIVD 203
                ++T G+++  V A D D      L L G    M    D          +G +++  
Sbjct: 6318 ---ENVTVGTLVALVNATDRD------LGLNGVVAYMIETGDPDGRFLIDSVTGALTVAQ 6368

Query: 204  -LSALNTSTIQLVVVATDTGNPPRQAS 229
             L   + +  QL V+A D G P  Q++
Sbjct: 6369 TLDRESKAEYQLEVLAEDQGIPSLQST 6395



 Score = 48.5 bits (114), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 57/193 (29%), Positives = 86/193 (44%), Gaps = 16/193 (8%)

Query: 41   RELQFSKNEYSVSALENLPVNYVLLTVTTNKP-RDLRVKYWLSNDYGERFSISRQGDISL 99
            R  QFS+ ++ +S  EN+ V   L +V    P     V+Y    D    F I   G++ L
Sbjct: 3826 RAPQFSQGQFDISVSENVSVGSTLASVRALDPDSSAPVRYL---DSSAVFVILGDGNLVL 3882

Query: 100  MQCLDYETEDSYRFTVYATDTLMTT-SATVNISVVNVNDWDPRFRYPQYELFLPHIPLAD 158
               LD E  D Y  T+ A D +  T +A V I+V ++ND  P F    Y   +       
Sbjct: 3883 NSSLDREVVDFYNLTILAVDEVGNTGTALVQITVEDINDNPPVFERDIYRFSVAEGSGTG 3942

Query: 159  LTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIND-SGHISI---VDLSALNTST 211
            L  G V  K +A D     R+ LS   +    + +  ++  +G +++   +D  A +  T
Sbjct: 3943 LQVGVVRAK-DAKDAGSNARI-LSYSIVNTSADGLLKLDPITGSLTVGGSIDREAFD--T 3998

Query: 212  IQLVVVATDTGNP 224
            I LVV A D G P
Sbjct: 3999 ITLVVSAVDAGIP 4011



 Score = 48.1 bits (113), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 50/169 (29%), Positives = 74/169 (43%), Gaps = 20/169 (11%)

Query: 74   DLRVKYWLSNDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISV 132
            D R+ Y L  D    F I S  G +     LD E +DSY   V  TD L +  + + + V
Sbjct: 5919 DSRLLYSLPVDL-TSFDINSLTGVLRTKDLLDREVKDSYSLPVTVTDGLFSAVSNLTVVV 5977

Query: 133  VNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGK----VEAADGDKGDRVTLSLR---G 185
             +VND  P+F    Y         A L+ G    +    V A+D D G+  +++ +   G
Sbjct: 5978 DDVNDNSPQFNASSY--------FASLSEGGGANRPVITVLASDSDVGENGSVTYQIVGG 6029

Query: 186  PYEKMFSINDSGHISIV---DLSALNTSTIQLVVVATDTGNPPRQASVP 231
                 F++   G   IV   DL   + +   L V A D G+P R ++VP
Sbjct: 6030 NSGSTFALRSRGKGEIVAVGDLDYEDRTNFTLFVEARDGGSPVRSSTVP 6078



 Score = 45.8 bits (107), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 43/126 (34%), Positives = 66/126 (52%), Gaps = 12/126 (9%)

Query: 77   VKYWLSNDYGERFSIS-RQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISV 132
            ++Y L+ D    F+I  R GD+S ++ LD ET+ SY  TV A D+    +T +ATV   +
Sbjct: 8499 IRYSLT-DASSTFTIDHRFGDLSTLKTLDRETQASYNLTVLAVDSGSPRLTGTATVAAIL 8557

Query: 133  VNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLS-LRGPYEK 189
            ++VND  P F      +F+  +   + T GS +  + A D D G    VT S L G  + 
Sbjct: 8558 LDVNDNAPTF---TQSVFVGRVE-ENATLGSSVLLLSATDRDTGLNADVTFSILSGDEDG 8613

Query: 190  MFSIND 195
             F ++D
Sbjct: 8614 AFRLSD 8619



 Score = 45.8 bits (107), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 46/141 (32%), Positives = 69/141 (48%), Gaps = 14/141 (9%)

Query: 93   RQGDISLMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYEL 149
            R G I L + +D E++D Y FTV A D   + +T SA V ++V + ND  P F       
Sbjct: 2700 RSGQIQLNRKVDRESKDVYDFTVEAIDEGASPLTGSAQVKVTVSDENDNTPVFVNA---- 2755

Query: 150  FLPHIPLADLTP-GSVIGKVEAADGDKGDR--VTLSLRGPYEKMFSINDSGHISIV--DL 204
             + +I L + +P G+ +    A D D G+   VT S  G +   F+IN S  + ++   L
Sbjct: 2756 -VRNISLREDSPRGTEVATFTATDRDIGNNGLVTYSF-GSFLAEFNINGSTGVVVLSRSL 2813

Query: 205  SALNTSTIQLVVVATDTGNPP 225
                T    L V+A+D G  P
Sbjct: 2814 DFEKTQRYDLDVIASDNGQKP 2834



 Score = 45.4 bits (106), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 54/198 (27%), Positives = 91/198 (45%), Gaps = 21/198 (10%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTTNKP---RDLRVKYWL-SNDYGERFSI-SR-QGDI 97
            QF+ + Y  S  E    N  ++TV  +      +  V Y +   + G  F++ SR +G+I
Sbjct: 5986 QFNASSYFASLSEGGGANRPVITVLASDSDVGENGSVTYQIVGGNSGSTFALRSRGKGEI 6045

Query: 98   SLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHI 154
              +  LDYE   ++   V A D    + +++  V +S++NVND  P+F      + +   
Sbjct: 6046 VAVGDLDYEDRTNFTLFVEARDGGSPVRSSTVPVYVSILNVNDNRPQFTPATLNVKISEA 6105

Query: 155  PLADLTPGSVIGKVEAADGDKGDRVTL------SLRGPYEKMFSINDS-GHISIVD-LSA 206
             +    PGS I  V A+D D GD   L      ++       F +N S G +++++ L  
Sbjct: 6106 AV----PGSQITTVSASDADSGDNAVLQYSVLETVGSVGYGKFGVNASTGQVTLLEPLDR 6161

Query: 207  LNTSTIQLVVVATDTGNP 224
             N S   L + A+D G P
Sbjct: 6162 ENRSQYSLKIQASDGGLP 6179



 Score = 45.1 bits (105), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 48/194 (24%), Positives = 91/194 (46%), Gaps = 17/194 (8%)

Query: 43    LQFSKNEYSVSALENLPVNYVLLTV--TTNKPRDLRVKYWLSNDYGER-FSI-SRQGDIS 98
             L+F K+ YS    EN  +   +L +  T +      + + ++    ER F++ S+ G ++
Sbjct: 10417 LKFDKSNYSALVYENATIGEFVLRIGATDDDVTAANLTFEITGGNSERNFALNSKTGALT 10476

Query: 99    LMQCLDYETEDSYRFTVYATD----TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHI 154
             +   LD E +DS+  TV A +    ++M  + T+ +++++VND  PRF        +   
Sbjct: 10477 VNGSLDREKQDSFNVTVIAKEDKRPSVMANT-TIEVALIDVNDNKPRFAVSMVTKTISET 10535

Query: 155   PLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSINDS-GHISIVDLSALNTS 210
                 ++ G+ I +V A D D G    +S   + G    +F+++ + G + +V        
Sbjct: 10536 ----MSVGAEIVQVPATDADSGANGIVSYSIVTGNARDVFAVDSANGSVYVVRPLPSGGP 10591

Query: 211   TIQLVVVATDTGNP 224
             +  L V A D G P
Sbjct: 10592 SYTLTVEAKDGGVP 10605



 Score = 44.7 bits (104), Expect = 0.076,   Method: Compositional matrix adjust.
 Identities = 66/226 (29%), Positives = 100/226 (44%), Gaps = 34/226 (15%)

Query: 38   TSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDL---RVKYWLSNDYGERFSI-SR 93
            T+L    F  + Y+VS  E+  +   +LTV+   P      +V Y L       F+I S 
Sbjct: 8966 TNLNAPTFPVSVYNVSVREDAGMGASVLTVSAFDPDSHDAGQVFYSLGTGSAVPFTINSS 9025

Query: 94   QGDISLMQC--LDYETEDSYRFTVYATDTLM---TTSATVNISVVNVNDWDPRFRYPQYE 148
             G IS+ +   +D ET   Y FTV A D  +   +    V ++V +VND  P F     +
Sbjct: 9026 TGVISVARPSDIDMETNPLYNFTVVAIDAGIPQKSGEVIVRVTVTDVNDNAPVFT----K 9081

Query: 149  LFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLS-LRGPYEKMFSINDS-GHISIVDL 204
            LF  +  + + T  + + +V A+D D G    VT S L   +   F IN + G I   DL
Sbjct: 9082 LF--YSAVVNGTSDTSLVRVSASDADSGLNGAVTYSILPSQFSDRFVINKTTGDIFFSDL 9139

Query: 205  SALNTSTIQLVVVATDTGNP---------------PRQASVPAIMH 235
            +   +    L VVA D+G P               PR+ ++P I+ 
Sbjct: 9140 ALNQSFNASLEVVAEDSGFPSLNAKTATVQINVLIPRETNLPPIVE 9185



 Score = 42.7 bits (99), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 34/104 (32%), Positives = 56/104 (53%), Gaps = 8/104 (7%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSN-DYGERFSI-SRQGDISL 99
            F K  YSVS  E++ V+  L T      +   +  + Y +S+ + G +F I +  G++++
Sbjct: 2855 FGKAFYSVSVNESVAVSSELFTAVASDLDAGSNGELTYSISSGNAGGQFEIDATTGNVTV 2914

Query: 100  MQCLDYETEDSYRFTVYATDTLM---TTSATVNISVVNVNDWDP 140
               LDYET   Y FT+ A D  +   + SA V ++V+NV+D  P
Sbjct: 2915 AIPLDYETTKRYEFTITAKDGGVPQRSASANVTVNVLNVDDIPP 2958



 Score = 42.4 bits (98), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 52/200 (26%), Positives = 98/200 (49%), Gaps = 16/200 (8%)

Query: 45    FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGERFSI-SRQGDISLM 100
             F ++ Y+VS  E++ V   + T +    ++ R+  V Y + +     F+I +  G+++++
Sbjct: 10216 FEQSGYNVSVSEDVDVGSTVFTASAADNDEGRNAIVVYEIVSG-SSSFAINTTAGEVTVI 10274

Query: 101   QCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLA 157
               LD E + ++  T+ A+D    L  +   + IS+V+VND  P  + P  E  +      
Sbjct: 10275 NSLDREVQSNFVLTIRASDILNGLFFSETILQISLVDVNDNGPVIQ-PLSEQSVKE---- 10329

Query: 158   DLTPGSVIGKVEAADGDKGDRVTLSL-RGPYEKMFSINDSGHISIV-DLSALNTSTIQLV 215
             +   G+V+  V A D D  D +T  + RG     F I+ SG +++   L A   +   L 
Sbjct: 10330 NAAVGTVVFNVTATDIDS-DVLTYEIVRGNANNSFEISRSGVVTVKGQLDAEIRTRYDLR 10388

Query: 216   VVATDTGNPPRQASVPAIMH 235
             +  +D+GN   +ASV  ++ 
Sbjct: 10389 INVSDSGNRSFEASVDVVVK 10408



 Score = 42.0 bits (97), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 50/196 (25%), Positives = 77/196 (39%), Gaps = 12/196 (6%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTTNKP---RDLRVKYWLSNDYGERFSISR-QGDISL 99
            Q  K  Y  S +EN P    +LTV         +  V Y LS      F+I    G + +
Sbjct: 1417 QLEKANYEASVVENSPTGTSVLTVKATDDDIGSNGAVTYSLSPS-SSLFNIDNTSGVLEV 1475

Query: 100  MQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
               LD E +  Y   V A D      T +A   ++V + ND  PRF    Y   +     
Sbjct: 1476 TGSLDREKQSVYSLNVIAVDGGDPSRTATARATVTVADANDNTPRFSRSLYAAGVSESVA 1535

Query: 157  ADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSGHISIVDLSALNTSTI---Q 213
               T    +   +A  G  G  +   + G     F++ DS   S+    +L+  T+   +
Sbjct: 1536 VGSTVPVTVSATDADAGANGQLIYSIVGGNINGAFNL-DSATASLTVAKSLDRETLSSYR 1594

Query: 214  LVVVATDTGNPPRQAS 229
            L + A+D G  PR ++
Sbjct: 1595 LTIQASDGGTSPRSST 1610



 Score = 41.6 bits (96), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 10/88 (11%)

Query: 95    GDISLMQCLDYETEDSYRFTVYAT------DTLMTTSATVNISVVNVNDWDPRFRYPQYE 148
             GD+ + + LD ET D Y + + AT      D + ++ A   ++V++VND  P F    Y 
Sbjct: 10163 GDVIVNEKLDRETVDKYSYEIEATSFDPIVDQVASSFAKFTVTVLDVNDNKPLFEQSGYN 10222

Query: 149   LFLPHIPLADLTPGSVIGKVEAADGDKG 176
             + +      D+  GS +    AAD D+G
Sbjct: 10223 VSVSE----DVDVGSTVFTASAADNDEG 10246



 Score = 41.6 bits (96), Expect = 0.62,   Method: Compositional matrix adjust.
 Identities = 52/196 (26%), Positives = 96/196 (48%), Gaps = 30/196 (15%)

Query: 56   ENLPVNYVLLTVTT---NKPRDLRVKYWL-SNDYGERFSI-SRQGDISLMQCLDYETEDS 110
            EN PV  VL  +     +  ++ ++ + + S + G  FS+ S  G +S+++ LD ET+ +
Sbjct: 8264 ENSPVGPVLAEIKAQDRDSGKNGKLNFAITSGNNGGIFSLDSLSGQLSIVRSLDRETKKN 8323

Query: 111  YRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGK 167
            Y  TV  +D+    ++++  + I+V +++D  P F    Y          D   G+ I  
Sbjct: 8324 YDLTVAVSDSGVPSLSSTTVLKINVTDIDDNIPVFNQTIYNASASE----DAGLGNSIVT 8379

Query: 168  VEAADGDKG--DRVTLSLRGPYEKMFSI-NDSGHISIVDLSALNTSTI---QLVVVATDT 221
            V A DGD+G   ++  ++    +  F + N++G I++   +AL+   +   QLV+ A   
Sbjct: 8380 VSATDGDRGVNAKILYAITSGDQGSFDVNNETGVITLA--AALDFERVENYQLVITAR-- 8435

Query: 222  GNP-------PRQASV 230
             NP       PR A+V
Sbjct: 8436 -NPSSSSSILPRSATV 8450



 Score = 40.8 bits (94), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 47/170 (27%), Positives = 77/170 (45%), Gaps = 17/170 (10%)

Query: 49   EYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGERFSI-SRQGDISLMQCLD 104
            +Y  S  E+L V   ++ VT    +  R+ +V+Y L+      F I +  G I+L+  LD
Sbjct: 896  QYVASVGEDLAVGRTVIQVTAKDRDSGRNGQVRYSLTAASPTIFQIDAFTGSITLLSSLD 955

Query: 105  YETEDSYRFTVYATDTLMTTS------ATVNISVVNVNDWDPRFRYPQYELFLPHIPLAD 158
             ET   Y  TV+A D   +        A+V + V+++ND  P F+   Y   +       
Sbjct: 956  RETTGEYNMTVFARDDAASAELRQSSSASVVVQVLDINDNAPLFQKAVYTATVSE----S 1011

Query: 159  LTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSINDSGHISIVDLS 205
             + G+ + +V+A D D G    +S   + G   + F IN S  +  V  S
Sbjct: 1012 FSVGTSVVQVKATDLDTGLNALVSYSFVNGNVGQAFGINSSNGLVTVAAS 1061



 Score = 40.0 bits (92), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 33/119 (27%), Positives = 57/119 (47%), Gaps = 15/119 (12%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDLR------VKY-WLSNDYGERFSI-SRQGD 96
            F K  Y+ +  E+  V   ++ V   K  DL       V Y +++ + G+ F I S  G 
Sbjct: 999  FQKAVYTATVSESFSVGTSVVQV---KATDLDTGLNALVSYSFVNGNVGQAFGINSSNGL 1055

Query: 97   ISLMQCLDYETEDSYRFTVYATD----TLMTTSATVNISVVNVNDWDPRFRYPQYELFL 151
            +++   LD+ET  +Y  T+ A D      ++++ T+N++V + ND  P F    Y   L
Sbjct: 1056 VTVAASLDFETRPAYSLTIEAVDGNSVKPLSSTVTLNVAVTDSNDHAPSFSANVYRAVL 1114



 Score = 38.1 bits (87), Expect = 6.9,   Method: Compositional matrix adjust.
 Identities = 43/144 (29%), Positives = 70/144 (48%), Gaps = 13/144 (9%)

Query: 77   VKYWLSNDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYAT---DTLMTTSATVNISV 132
            +KY L++     F + +  G IS+   +D E   S+ F V A+     +   SATV +++
Sbjct: 9522 LKYSLTSGSSVPFVVNATTGVISVSGDIDRELNSSFTFVVTASTIAGNVPPGSATVTVTI 9581

Query: 133  VNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEK 189
             ++ND  P+   P    F+P     + T GS I  ++A D D G    LS   + G   +
Sbjct: 9582 ADINDNTPQVD-PLTTAFVPF----NATVGSHIVVIQATDPDAGVNGKLSFSIVSGNSAQ 9636

Query: 190  MFSINDS-GHISIVDLSALNTSTI 212
             F+IN S G I++  L  ++ S I
Sbjct: 9637 FFAINSSTGEITLTRLFPVSVSDI 9660


>gi|395512146|ref|XP_003760305.1| PREDICTED: cadherin-17 [Sarcophilus harrisii]
          Length = 868

 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 81/294 (27%), Positives = 129/294 (43%), Gaps = 34/294 (11%)

Query: 14  VVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPR 73
           +V+ ++Y N+  YA   L+VS    +     FS+  Y     EN  +N  L+T+    P 
Sbjct: 575 LVQNVRY-NESSYAKFILMVSDVNEAPV---FSQALYQAQISENAEINTKLITINATDPE 630

Query: 74  DLRVKYWLSNDYGERFSISR-QGDISLMQCLDYETEDSYRFTVYATD---TLMTTSATVN 129
              + Y LS D      I    G+I  M+ LD ETE  Y+  V AT+   + +T+S   +
Sbjct: 631 GEAISYSLSGDTRGWLRIDGVTGEIFTMRSLDRETEKYYQVKVIATEKGGSHLTSSVYFH 690

Query: 130 ISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDK----GDRVTLS--- 182
           +++++VND  PR       LF  + PL+   PGS+I  +EA D D+    G R   S   
Sbjct: 691 LALLDVNDNPPRLVKDYTGLFFCY-PLS--KPGSLI--IEATDDDQQPAWGPRFDFSLGN 745

Query: 183 --LRGPYEKMFSINDSGHISIVDLSALNTSTIQLVVVATDTGNPPRQASVPAIMHFPEAI 240
             L+  +E +  IN S     +  +       ++ V   D G PP + +V     FP  +
Sbjct: 746 TKLQNDWE-ISKINGSHAKVSIKHTNFEEKVYEVSVKINDGGKPPLENTV----SFPVTM 800

Query: 241 VQQASSKLN-------SGTSSTVLIILGVVLIVLGFVIILLILYIHKNKHTKNN 287
            + AS           SG  +  + +   ++  L   +IL   +IH  K  K N
Sbjct: 801 CKCASDGWCYQEPDSFSGMPTVAMAVGTFLVTFLVIGVILAATFIHLKKKNKTN 854


>gi|156404209|ref|XP_001640300.1| predicted protein [Nematostella vectensis]
 gi|156227433|gb|EDO48237.1| predicted protein [Nematostella vectensis]
          Length = 2493

 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 65/201 (32%), Positives = 95/201 (47%), Gaps = 20/201 (9%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGERFSISRQ-GDISL 99
           +F +  YS    E+  +   +LTV     +   + ++ Y ++    E FS+    G I  
Sbjct: 542 EFKRRSYSAEVKEDASLGTSVLTVLATDRDTGSNAKISYSIATLVPE-FSVDETTGVIKT 600

Query: 100 MQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
              LD E  D+YRF V ATD     +   + V I + +VND DP F  P YE  +     
Sbjct: 601 AGSLDREKVDTYRFEVTATDHGIPQLKAKSFVYIHIADVNDNDPVFLKPSYEAKVRE--- 657

Query: 157 ADLTPGSVIGKVEAADGDKGDRV----TLSLRGPYEKMFSINDSGHISIVDLSALNTSTI 212
            D+ PG  + +V A+D D G       + +  G  +  F+I+ +  I I  L  L+  TI
Sbjct: 658 -DIRPGGRVIEVSASDADIGKNAQIIYSFASNGDGQGTFTIDSTQGI-IRTLKPLDRETI 715

Query: 213 ---QLVVVATDTGNPPRQASV 230
              +L VVATD G PP QASV
Sbjct: 716 PEYELTVVATDQGTPPGQASV 736



 Score = 57.8 bits (138), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 63/230 (27%), Positives = 107/230 (46%), Gaps = 15/230 (6%)

Query: 12  TLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVT--- 68
           TL V+A    N  R A  T+ ++    +    QFSK  YS +  E++PVN ++ TV    
Sbjct: 201 TLQVQAQDQGNPPRSATVTVKITLLDVNDCTPQFSKKVYSATIREDVPVNQLVTTVRATD 260

Query: 69  TNKPRDLRVKYWL-SNDYGERFSISR-QGDISLMQCLDYETEDSYRFTVYATDT---LMT 123
            ++  +  V + + S +    FSI+R  G++ + Q LDYE    +   V A D     + 
Sbjct: 261 CDQGSNGEVFFEIVSGNDMNFFSINRINGEVRVKQKLDYEMIGVFNLLVTAQDKGQPFLY 320

Query: 124 TSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSL 183
              TV+I++++VND  P+F    ++  +P     +   G    +V+A D D G    ++ 
Sbjct: 321 NQTTVDIALIDVNDNAPQFVSSHFQTMIPE----NYAVGQEFYRVQAYDKDHGTNGEITF 376

Query: 184 RGPYEKM-FSIND-SGHISIV-DLSALNTSTIQLVVVATDTGNPPRQASV 230
                 + FSIN+ +G ISI  +L           + A D G P ++ + 
Sbjct: 377 SFMQNDLPFSINENTGGISIKEELDREKVPKFTFGIKARDKGVPFKEGTA 426



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 52/202 (25%), Positives = 90/202 (44%), Gaps = 11/202 (5%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTT----NKPRDLRVKYWLSNDYGERFSISRQGDISL 99
           +FS+ EY  S  EN      +L V      + P ++      S+ +   F I+ QG I+L
Sbjct: 441 KFSQEEYHTSIAENSRWGTSVLQVKAIDPDSGPTNVVYSIVSSSGHDRCFRINPQGLITL 500

Query: 100 MQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADL 159
              L+Y T+  Y F+V A+D +++++A V ++V + N   P F+   Y   +      D 
Sbjct: 501 SCTLNYNTKHVYVFSVSASDGMLSSTALVYVNVTDSNTHAPEFKRRSYSAEVKE----DA 556

Query: 160 TPGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSINDSGHI--SIVDLSALNTSTIQLVV 216
           + G+ +  V A D D G    +S         FS++++  +  +   L      T +  V
Sbjct: 557 SLGTSVLTVLATDRDTGSNAKISYSIATLVPEFSVDETTGVIKTAGSLDREKVDTYRFEV 616

Query: 217 VATDTGNPPRQASVPAIMHFPE 238
            ATD G P  +A     +H  +
Sbjct: 617 TATDHGIPQLKAKSFVYIHIAD 638



 Score = 48.5 bits (114), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 61/205 (29%), Positives = 91/205 (44%), Gaps = 23/205 (11%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTTNKP---RDLRVKYWLSNDY----GERFSISR-QG 95
           QFS+ +   S  E+  V  V+ TV+ + P    +  ++Y +S          FSI +  G
Sbjct: 19  QFSRLQEDASVSEDAEVGTVVATVSASDPDSGSNGMIRYSMSPSQNLMSATYFSIDQITG 78

Query: 96  DISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLP 152
            I+  + LD E  D + F V A D     +     + I+V++VND  P F    Y   +P
Sbjct: 79  VITTKRGLDREFLDRHFFRVKAEDGGEPSLEGYMDLTINVLDVNDNGPIFERNIYAADIP 138

Query: 153 HIPLADLTPGSVIGKVEAADGDKGDR-----VTLSLRGPYEKMFSIND-SGHISIVD-LS 205
                D + G  +  V A+D D G         L+  G     FSI + SG ++++  L 
Sbjct: 139 E----DKSIGDFVLAVRASDADSGSNGEVKYCILNSDGD-NSAFSIGEVSGAVTVMKKLD 193

Query: 206 ALNTSTIQLVVVATDTGNPPRQASV 230
                T  L V A D GNPPR A+V
Sbjct: 194 REKVPTYTLQVQAQDQGNPPRSATV 218



 Score = 43.1 bits (100), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 50/172 (29%), Positives = 77/172 (44%), Gaps = 27/172 (15%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGERFSISR----------- 93
           F K  Y V+  E+ P    ++TV   K +DL      S + G  +SI R           
Sbjct: 752 FEKPLYEVTVPEDTPPRSPVITVKA-KSQDL------SPETGMMYSIVRGNSPQVFDINP 804

Query: 94  -QGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLP 152
             G I  +  LDYET+  YR TV AT +   T  TV + + ++ND       P  E F  
Sbjct: 805 NTGAIQTLMKLDYETQSEYRLTVRATLSPFFTETTVMVYLKDIND-----NTPVLEAFHM 859

Query: 153 HIPLAD-LTPGSVIGKVEAADGDKGDRVTLS-LRGPYEKMFSIN-DSGHISI 201
           +I + +   P     K+ A D D  D++T   + G  ++  ++N  SG +S+
Sbjct: 860 NINVQEGKVPPEARYKIPAYDPDVSDKLTFKVMEGNAKEWVTLNATSGELSV 911



 Score = 39.3 bits (90), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 46/140 (32%), Positives = 67/140 (47%), Gaps = 13/140 (9%)

Query: 89  FSI-SRQGDISLMQCLDYETEDSYRFTVYATDTLMT-TSATVNISVV--NVNDWDPRFRY 144
           F+I S QG I  ++ LD ET   Y  TV ATD       A+V + V+  +V D  P F  
Sbjct: 695 FTIDSTQGIIRTLKPLDRETIPEYELTVVATDQGTPPGQASVKVKVILEDVKDSPPLFEK 754

Query: 145 PQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-DSGHI- 199
           P YE+ +P     D  P S +  V+A   D      +    +RG   ++F IN ++G I 
Sbjct: 755 PLYEVTVPE----DTPPRSPVITVKAKSQDLSPETGMMYSIVRGNSPQVFDINPNTGAIQ 810

Query: 200 SIVDLSALNTSTIQLVVVAT 219
           +++ L     S  +L V AT
Sbjct: 811 TLMKLDYETQSEYRLTVRAT 830



 Score = 38.9 bits (89), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 38/142 (26%), Positives = 68/142 (47%), Gaps = 13/142 (9%)

Query: 89  FSISRQ-GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRY 144
           FSI+   G IS+ + LD E    + F + A D        +A + I+++++ND  P+F  
Sbjct: 385 FSINENTGGISIKEELDREKVPKFTFGIKARDKGVPFKEGTAQITITLLDINDNPPKFSQ 444

Query: 145 PQYELFLPHIPLADLTP-GSVIGKVEAADGDKG-DRVTLSL--RGPYEKMFSINDSGHIS 200
            +Y     H  +A+ +  G+ + +V+A D D G   V  S+     +++ F IN  G I+
Sbjct: 445 EEY-----HTSIAENSRWGTSVLQVKAIDPDSGPTNVVYSIVSSSGHDRCFRINPQGLIT 499

Query: 201 IVDLSALNTSTIQLVVVATDTG 222
           +      NT  + +  V+   G
Sbjct: 500 LSCTLNYNTKHVYVFSVSASDG 521


>gi|156368057|ref|XP_001627513.1| predicted protein [Nematostella vectensis]
 gi|156214425|gb|EDO35413.1| predicted protein [Nematostella vectensis]
          Length = 1781

 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 59/197 (29%), Positives = 95/197 (48%), Gaps = 15/197 (7%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKP---RDLRVKYW-LSNDYGERFSI-SRQGDISL 99
           F+ +E++VS  EN+     ++TVT   P    + +V Y      +G +F+I +  G I  
Sbjct: 15  FTSDEFTVSIAENVDDGTTVITVTATDPDAGDNAKVSYATYGGSHGNKFAIDASSGRIYT 74

Query: 100 MQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
               D ET+D Y   V A+D      +++  V ++V + ND  P+F    Y   +     
Sbjct: 75  TGTFDRETKDDYSINVTASDHGNPSKSSTCVVLVTVADNNDNSPKFPALHYVFDIAE--- 131

Query: 157 ADLTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSIND-SGHISIVDLSALNTSTIQ 213
            D   G+ IG V A+D D G+  R+T S+  P +  FS+N  +G I++        +   
Sbjct: 132 -DAAVGASIGTVSASDADIGENARLTYSIVSPEKATFSMNPVTGEITVGQRLDREGANYS 190

Query: 214 LVVVATDTGNPPRQASV 230
           + V ATD G PP  AS+
Sbjct: 191 IRVTATDLGTPPLSASM 207



 Score = 57.8 bits (138), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 65/206 (31%), Positives = 101/206 (49%), Gaps = 19/206 (9%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNK---PRDLRVKY-WLSNDYGERFSIS-RQGDISL 99
           FSK  Y  S  E++ V   LLTVT       R+  + Y  ++ +  E F I    G + +
Sbjct: 634 FSKAVYQTSENEDIAVGSALLTVTATDRDFGRNGEISYDIIAGNSQEYFGIGLTNGSLYV 693

Query: 100 MQCLDYETEDSYRFTVYATDTL---MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
            + LDYE +++Y   V ATD      T+ ATV I++ +VND +P F   +Y   L     
Sbjct: 694 SKPLDYEHQENYSLNVSATDGGKEPKTSYATVRITLRDVNDNNPVFSPIEYRCELAE--- 750

Query: 157 ADLTPGS-VIGKVEAADGDKGDRVTLS---LRGPYEKMFSIND-SGHI-SIVDLSALNTS 210
            + TP S V+  V A D D+  + ++    L G  +  F I++ +G I + V+     T 
Sbjct: 751 -NTTPRSVVVCSVRATDRDERGQQSVRYSILGGSGKDKFVIDERTGEIRATVEFDFEVTM 809

Query: 211 TIQLVVVATDTG-NPPRQASVPAIMH 235
           +  L++ A D G +P R A  PA +H
Sbjct: 810 SSFLMIAAKDEGLSPQRTADPPASVH 835


>gi|443710968|gb|ELU04950.1| hypothetical protein CAPTEDRAFT_218758 [Capitella teleta]
          Length = 1129

 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 74/242 (30%), Positives = 108/242 (44%), Gaps = 37/242 (15%)

Query: 13  LVVRAIQYDNQDRYALATLIVSKAGTSLRELQ-----------------FSKNEYSVSAL 55
           L  RAI ++ Q  Y +  L  S   ++LR                    FS++ Y+V+ L
Sbjct: 410 LTRRAIDHEEQSTYEIH-LRCSDQASTLRLTAESVITVDVLDENDNSPVFSRSLYNVTVL 468

Query: 56  ENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGERFSIS-RQGDISLMQCLDYETEDSY 111
           EN P +  LL V+    +   + +V+Y +       F+I    G IS +  LDYE    Y
Sbjct: 469 ENTPKSRFLLRVSATDRDSGENGQVRYSIEAGARMNFTIHPTTGVISSLVKLDYEINTEY 528

Query: 112 RFTVYATD----TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGK 167
            F V ATD       +++A V I++V+V+D DP F    Y+ F+P     D TP S +G 
Sbjct: 529 TFAVIATDQNRDARRSSTALVIINIVDVDDEDPIFVLKSYDFFVPE----DSTPNSHVGN 584

Query: 168 VEAADGD-----KGDRVTLSLRGPYEKMFS-INDSGHI-SIVDLSALNTSTIQLVVVATD 220
           V A D D     K       L G    +F  I  +G I ++ +L      T + VV AT 
Sbjct: 585 VVAIDADSYLYNKFQYTIRPLGGSLTGVFGVITQTGEIVTLAELDREAQDTYRFVVTATS 644

Query: 221 TG 222
           TG
Sbjct: 645 TG 646



 Score = 58.9 bits (141), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 63/214 (29%), Positives = 105/214 (49%), Gaps = 20/214 (9%)

Query: 91  ISRQGDISLMQCLDYETEDSYRFTVYATDTLMTTS---ATVNISVVNVNDWDPRFRYPQY 147
           I++ G+I  +  LD E +D+YRF V AT T +  +     V I VV+VND  P   +P  
Sbjct: 616 ITQTGEIVTLAELDREAQDTYRFVVTATSTGLREAEDDTVVTIHVVDVNDHTPVITFPTE 675

Query: 148 ELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRG--PYEKMFSINDSGHI--SIVD 203
                +I    +   SVI  V A D D   +++  L G    E  F+IN+S  +  ++ D
Sbjct: 676 SNNTVYIS-NQMPKSSVICTVTAFDLDL-PQLSFHLFGDQSSENYFAINESSGLVSTLKD 733

Query: 204 LSALNTSTIQLVVVATDTGNPPRQASVPAIMHFPEAIVQQA---SSKLNSGTSSTVLIIL 260
           +  ++ S  +L V+  D G+PP+  +  + +H    IV Q+      + SG  S  LI++
Sbjct: 734 MEDISHSVFRLNVLVRDGGSPPK--TTQSALHI---IVNQSIPYHVDVTSGRPSNHLIVI 788

Query: 261 GVVLIVLGFVIILLILYIHK--NKHTKNNGPPGS 292
            +     G V+++L++ I    N+  +N    GS
Sbjct: 789 AIAC-SSGVVMVILVVAIAAILNQQRRNYKQSGS 821



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 44/139 (31%), Positives = 69/139 (49%), Gaps = 12/139 (8%)

Query: 90  SISRQGDISLMQCLDYETEDSYRFTVYATD-TLMTTSATVNISVVNVNDWDPRFRYPQYE 148
           S SR+  + L + LD+E   SY   + A D +  T S ++ I+V+++ND  P F   +Y 
Sbjct: 189 SSSREVGLVLNKYLDHEKTQSYSLILMAHDGSTNTASVSIEITVLDLNDNAPVFDQREYF 248

Query: 149 LFLPH-IPLADLTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSINDSGHISIVD-- 203
             +   +PL     G V+G++ A D D G+  RV   L+ P    F +N +  I  V   
Sbjct: 249 FRVEESVPL-----GHVVGRILATDTDSGENGRVVYDLQDPVSP-FKVNSTSGIITVSGL 302

Query: 204 LSALNTSTIQLVVVATDTG 222
           L    T +  L V+A+D G
Sbjct: 303 LDREATESYSLTVLASDLG 321


>gi|402872852|ref|XP_003919612.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin gamma-C4 [Papio
           anubis]
          Length = 868

 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 65/230 (28%), Positives = 104/230 (45%), Gaps = 22/230 (9%)

Query: 13  LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKP 72
           LV+ A+   N  R   A L VS    +     F ++ Y +S LE+ P   VL+ +  + P
Sbjct: 210 LVLTAVDGGNPPRSGTAELRVSVLDVNDNAPAFQQSSYRISVLESAPAGMVLIQLNASDP 269

Query: 73  RDL----RVKYWLSNDYGER----FSI-SRQGDISLMQCLDYETEDSYRFTVYATD---T 120
            DL     V ++ S    +R    FS+    G ++L+  LD+E+E+ Y F V A D    
Sbjct: 270 -DLGPSGNVTFYFSGHTPDRVRNLFSLHPTTGKLTLLGPLDFESENYYEFDVRARDGGSP 328

Query: 121 LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVT 180
            M    ++ + +++VND  P          LP        PG+V+  +   D D G    
Sbjct: 329 AMEQHCSLRVDLLDVNDNAPYITVTSELGTLPE----SAEPGTVVALISVQDPDSGSNGD 384

Query: 181 LSLRGPYEKMFSINDS--GHISIVDLSALN---TSTIQLVVVATDTGNPP 225
           +SLR P    F++  +     S+V    L+    S+  ++V A+D GNPP
Sbjct: 385 VSLRIPDHLPFALKSAFRNQFSLVTAGPLDREAKSSYDIMVTASDAGNPP 434



 Score = 47.4 bits (111), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 45/169 (26%), Positives = 78/169 (46%), Gaps = 27/169 (15%)

Query: 77  VKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVV 133
           + + L + +  +FS+   G       LD E + SY   V A+D     ++T  T+ +++ 
Sbjct: 393 LPFALKSAFRNQFSLVTAGP------LDREAKSSYDIMVTASDAGNPPLSTHRTIFLNIS 446

Query: 134 NVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMF 191
           +VND  P F    +E+F+P     +  PG ++  + A+D D G    ++ SL  P  +  
Sbjct: 447 DVNDNPPSFFQRSHEVFVPE----NNRPGDLLCSLAASDPDSGLNALISYSLLEPRNR-- 500

Query: 192 SINDSGHISIVDLSAL----------NTSTIQLVVVATDTGNPPRQASV 230
            ++ S  IS+   +             T T+Q  V A D GNPP  ++V
Sbjct: 501 DVSASSFISLNPQTGAVHATRSFDYEQTQTLQFEVQARDRGNPPLSSTV 549



 Score = 44.7 bits (104), Expect = 0.077,   Method: Compositional matrix adjust.
 Identities = 50/190 (26%), Positives = 83/190 (43%), Gaps = 15/190 (7%)

Query: 95  GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYE--L 149
           G +   +  DYE   + +F V A D     ++++ TV + V+++ND  P    P+     
Sbjct: 515 GAVHATRSFDYEQTQTLQFEVQARDRGNPPLSSTVTVRLFVLDLNDNAPAVLRPRARPGS 574

Query: 150 FLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIND-SGHISIVDLS 205
             P      +  G +I KV A D D G    +S   L  P   +F+++  +G +      
Sbjct: 575 LCPQALPPSVGAGHLITKVTAVDLDSGYNAWVSYQLLEAPDPSLFAVSRYAGEVRTAVPI 634

Query: 206 ALNTSTIQLVVVATDTGNPPRQASVPAIMHFPE---AIVQ--QASSKLNSGTSSTVLIIL 260
             +    +LV+V  D+G+PP   SV  ++   E    +V   + SS    G S   L  L
Sbjct: 635 PADLPPQKLVIVVKDSGSPPLSTSVTLLVSLEEDTHPVVPDLRESSAPREGESRLTL-YL 693

Query: 261 GVVLIVLGFV 270
            V L+ + FV
Sbjct: 694 AVSLVAICFV 703


>gi|47227546|emb|CAG04694.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 2413

 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 73/265 (27%), Positives = 114/265 (43%), Gaps = 37/265 (13%)

Query: 1    DINEDDFLQPITLV---VRAIQYDNQDRYALATLIVSKAGTSLRELQ------------- 44
            D +E   L P+T V    R + Y+ Q RY + T      G     ++             
Sbjct: 1952 DEDETFLLNPVTGVFNVTRVLDYELQ-RYYILTARAQDGGGQASTVRVYFNVLDVNDNPP 2010

Query: 45   -FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWL-SNDYGERFSISRQGDISL 99
             F    YS S  E+LP    ++TV  +   D    ++ Y + S D    F I++ G++  
Sbjct: 2011 VFETTTYSASVSESLPAGSSVVTVVASDADDGPNAQLFYRIASGDPQGHFLITKDGNLRT 2070

Query: 100  MQCLDYETEDSYRFTVYATD------TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
             + LD ET+  Y   +   D      T  T++A V++ +++VND  P F   +      +
Sbjct: 2071 QKALDRETQSFYNLVITVNDLAPPPMTRFTSTAQVSVILLDVNDCPPTFTSQKMTYIQEN 2130

Query: 154  IPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIND-SGHISIV-DLSALNT 209
             P+      +V+  V A+D D G    V  SL GP+   FSI    G + +V +L     
Sbjct: 2131 TPV-----DTVVLAVHASDSDSGPNSYVEYSLHGPFSNKFSIGTIDGDVRLVGELDREEI 2185

Query: 210  STIQLVVVATDTGNPPRQASVPAIM 234
            S   L VVATD G PP  +++   M
Sbjct: 2186 SNYTLTVVATDKGEPPLSSTMDVTM 2210



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 62/205 (30%), Positives = 102/205 (49%), Gaps = 17/205 (8%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLS--NDYGERFSISRQGDIS 98
            +F+K+ Y  S  E+ P    LL V+    ++ ++  V+Y ++  N+ G+    S  G I+
Sbjct: 1185 KFTKDVYQASVSESAPNVTQLLRVSASDVDENKNGLVQYHVAEGNEEGQFMIDSSSGQIT 1244

Query: 99   LMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIP 155
            L+  LDYET  SY   + A D     +++S  ++ISV++ ND  P F      + +    
Sbjct: 1245 LVGKLDYETTSSYSLKIIAVDGGAEPLSSSCMLSISVLDENDNSPSFPKSSVSVDV---- 1300

Query: 156  LADLTPGSVIGKVEAADGDKGDR--VTLSLRGP-YEKMFSIN-DSGHISIV-DLSALNTS 210
            L ++  G ++  V A D D G    +T S+        FSI+ ++G I +V  L     S
Sbjct: 1301 LENMRIGELVASVTATDTDSGPNADITYSITATNNHGTFSISPNTGSIFLVKKLDYETQS 1360

Query: 211  TIQLVVVATDTGNPPRQASVPAIMH 235
              +L V A D G P R +S+P I+H
Sbjct: 1361 VYKLNVSAKDNGRPSRSSSIPVIIH 1385



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 58/191 (30%), Positives = 95/191 (49%), Gaps = 16/191 (8%)

Query: 56   ENLPVNYVLLTV---TTNKPRDLRVKYWLSNDYGERFSISR-QGDISLMQCLDYETEDSY 111
            EN PV+ V+L V    ++   +  V+Y L   +  +FSI    GD+ L+  LD E   +Y
Sbjct: 2129 ENTPVDTVVLAVHASDSDSGPNSYVEYSLHGPFSNKFSIGTIDGDVRLVGELDREEISNY 2188

Query: 112  RFTVYATDTL---MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKV 168
              TV ATD     ++++  V + V++VND  P F    Y++ +    L     G+ + +V
Sbjct: 2189 TLTVVATDKGEPPLSSTMDVTMVVLDVNDNTPSFSQNIYDIEIEENTLT----GTDVIQV 2244

Query: 169  EAADGDKG--DRVTLSLRGPYEKMFSINDSGHISIV-DLSALNTSTIQLVVVATDTGNPP 225
             A D D+G   ++  S+ G        + +G IS+   L     S+  L+V ATD G+ P
Sbjct: 2245 FATDADEGTNGQIRFSISGSNTDFRIYSVTGMISVARQLDREARSSYSLLVQATDRGSSP 2304

Query: 226  R--QASVPAIM 234
            R  QA+V  ++
Sbjct: 2305 RMDQATVNIVL 2315



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 34/111 (30%), Positives = 51/111 (45%), Gaps = 7/111 (6%)

Query: 77   VKYWLSNDYGERFSIS-RQGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNV 135
            V Y + +   + F I    GD+   + LD E    Y   V A D   ++   +NI+V ++
Sbjct: 1843 VTYTIISGADDSFRIDPESGDLIATKKLDRERRSKYSLLVRADDGKQSSDMRLNITVKDI 1902

Query: 136  NDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLR 184
            ND  P+F    Y   +P     D T GS++  + A+D D G    VT SL 
Sbjct: 1903 NDHSPKFSRATYSFDIPE----DTTAGSIVAAILASDSDSGVNGEVTYSLE 1949



 Score = 48.1 bits (113), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 54/196 (27%), Positives = 97/196 (49%), Gaps = 11/196 (5%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVT-TNKPRDLRVKYWL-SNDYGERFSISRQGDISLMQC 102
           FS+  YS    EN+ V  V+ TV+ T    +  V Y + S D    F+++  G I+    
Sbjct: 770 FSQKGYSFVMFENVGVGTVVGTVSATTVDLNTNVSYLITSGDQRGLFAVNSAGQITASSP 829

Query: 103 LDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHI-PLADLTP 161
           +D E +  ++  V A    +T   +VNI+V ++ND  PRF +      + H+  + + + 
Sbjct: 830 IDREEQSFHQLKVVARAGQITGEVSVNITVKDLNDNAPRFIHA-----VEHVSAVENWST 884

Query: 162 GSVIGKVEAADGDKGDR--VTLSLRGPYEKMFSINDS-GHISIVDLSALNTSTIQLVVVA 218
           G  I + +A+D D+G    V  SL+     +F I++  G I++     +  S+ ++ V+A
Sbjct: 885 GHTIFQAKASDPDEGANGVVVYSLKQNPRGLFHIHEKHGLITLTGPLEVTASSYEVEVIA 944

Query: 219 TDTGNPPRQASVPAIM 234
            D G P   +S+  I+
Sbjct: 945 EDMGVPKHTSSLVLIV 960



 Score = 43.5 bits (101), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 55/190 (28%), Positives = 89/190 (46%), Gaps = 17/190 (8%)

Query: 45   FSKNEYSVSALENLPVNYVLLTV---TTNKPRDLRVKYWLSNDYGERFSISRQGDISLMQ 101
            FS+N Y +   EN      ++ V     ++  + ++++ +S    +    S  G IS+ +
Sbjct: 2222 FSQNIYDIEIEENTLTGTDVIQVFATDADEGTNGQIRFSISGSNTDFRIYSVTGMISVAR 2281

Query: 102  CLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLAD 158
             LD E   SY   V ATD   +     ATVNI +++VND  P F    Y + +    L +
Sbjct: 2282 QLDREARSSYSLLVQATDRGSSPRMDQATVNIVLLDVNDCAPVFELSPYTVRVQE-NLEN 2340

Query: 159  LTPGSVIGKVEAADGDKGDRVTLSLR---GPYEKMFSINDSGHISI---VDLSALNTSTI 212
            L P +V+ +V A D D+G    LS     G  +  FS++  G + +   VD  A      
Sbjct: 2341 L-PTNVL-QVVARDDDQGANGQLSYMLSGGNDDGAFSLSSGGQLRLTQTVDREARGEYI- 2397

Query: 213  QLVVVATDTG 222
             L++ ATD+G
Sbjct: 2398 -LLITATDSG 2406



 Score = 42.4 bits (98), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 42/141 (29%), Positives = 65/141 (46%), Gaps = 17/141 (12%)

Query: 97  ISLMQCLDYETEDSYRFTVYATDT----LMTTSATVNISVVNVNDWDPRFRYPQYELFLP 152
           I +   LD E   SY  TV  +D       ++ A++ I V ++ND  P F+  +Y + + 
Sbjct: 404 IKVASVLDRERISSYNLTVSVSDNGKPVARSSFASLVIFVNDINDHPPIFQETEYRVDIS 463

Query: 153 HIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSINDSGHI----SIVDLS 205
                D+  GS I  V A DGD G    L    + G     FSI+++  +    +++D  
Sbjct: 464 E----DIPKGSYIKGVSATDGDSGQNANLRYSLVSGNALGWFSISENSGLVTSAALLDRE 519

Query: 206 ALNTSTIQLVVVATDTGNPPR 226
           A  TS + L + A D G  PR
Sbjct: 520 A--TSEVVLNISAKDQGLQPR 538



 Score = 40.8 bits (94), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 37/107 (34%), Positives = 57/107 (53%), Gaps = 10/107 (9%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVT---TNKPRDLRVKYWLS--NDYGERFSIS-RQGDIS 98
            F K+  SV  LEN+ +  ++ +VT   T+   +  + Y ++  N++G  FSIS   G I 
Sbjct: 1291 FPKSSVSVDVLENMRIGELVASVTATDTDSGPNADITYSITATNNHG-TFSISPNTGSIF 1349

Query: 99   LMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRF 142
            L++ LDYET+  Y+  V A D      ++S  V I V + ND  P F
Sbjct: 1350 LVKKLDYETQSVYKLNVSAKDNGRPSRSSSIPVIIHVRDFNDNPPIF 1396



 Score = 38.5 bits (88), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 57/190 (30%), Positives = 79/190 (41%), Gaps = 16/190 (8%)

Query: 52   VSALENLPVNYVLLTVTTNKPRDLR---VKYWLSNDYGERFSI-SRQGDISLMQCLDYET 107
            VSA+EN    + +     + P +     V Y L  +    F I  + G I+L   L+  T
Sbjct: 876  VSAVENWSTGHTIFQAKASDPDEGANGVVVYSLKQNPRGLFHIHEKHGLITLTGPLEV-T 934

Query: 108  EDSYRFTVYATDTLM---TTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSV 164
              SY   V A D  +   T+S  + +SV +VND  P F    YE+ +P     +    S 
Sbjct: 935  ASSYEVEVIAEDMGVPKHTSSLVLIVSVYDVNDNSPVFDQLSYEVLIPESEPVN----SR 990

Query: 165  IGKVEAADGD---KGDRVTLSLRGPYEKMFSINDSGHISI-VDLSALNTSTIQLVVVATD 220
              KVEA D D    G+ V     G    +F I   G + I  +L         LV+VA D
Sbjct: 991  FFKVEATDKDSGFNGEIVYDIAGGNTGDVFGIFPDGQLYIKAELDREIQERYNLVLVARD 1050

Query: 221  TGNPPRQASV 230
                P  ASV
Sbjct: 1051 RAVEPLSASV 1060


>gi|14277682|ref|NP_115782.1| protocadherin gamma-C4 isoform 2 precursor [Homo sapiens]
 gi|5457098|gb|AAD43785.1|AF152525_1 protocadherin gamma C4 short form protein [Homo sapiens]
 gi|71680343|gb|AAI01036.1| Protocadherin gamma subfamily C, 4 [Homo sapiens]
 gi|72533492|gb|AAI01039.1| Protocadherin gamma subfamily C, 4 [Homo sapiens]
 gi|119582350|gb|EAW61946.1| hCG1982215, isoform CRA_y [Homo sapiens]
          Length = 871

 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 65/230 (28%), Positives = 104/230 (45%), Gaps = 22/230 (9%)

Query: 13  LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKP 72
           LV+ A+   N  R   A L VS    +     F ++ Y +S LE+ P   VL+ +  + P
Sbjct: 210 LVLTAVDGGNPPRSGTAELRVSVLDVNDNAPAFQQSSYRISVLESAPAGMVLIQLNASDP 269

Query: 73  RDL----RVKYWLSNDYGER----FSI-SRQGDISLMQCLDYETEDSYRFTVYATD---T 120
            DL     V ++ S    +R    FS+    G ++L+  LD+E+E+ Y F V A D    
Sbjct: 270 -DLGPSGNVTFYFSGHTPDRVRNLFSLHPTTGKLTLLGPLDFESENYYEFDVRARDGGSP 328

Query: 121 LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVT 180
            M    ++ + +++VND  P          LP        PG+V+  +   D D G    
Sbjct: 329 AMEQHCSLRVDLLDVNDNAPYITVTSELGTLPE----SAEPGTVVALISVQDPDSGSNGD 384

Query: 181 LSLRGPYEKMFSINDS--GHISIVDLSALN---TSTIQLVVVATDTGNPP 225
           +SLR P    F++  +     S+V    L+    S+  ++V A+D GNPP
Sbjct: 385 VSLRIPDHLPFALKSAFRNQFSLVTAGPLDREAKSSYDIMVTASDAGNPP 434



 Score = 47.0 bits (110), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 45/169 (26%), Positives = 78/169 (46%), Gaps = 27/169 (15%)

Query: 77  VKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVV 133
           + + L + +  +FS+   G       LD E + SY   V A+D     ++T  T+ +++ 
Sbjct: 393 LPFALKSAFRNQFSLVTAGP------LDREAKSSYDIMVTASDAGNPPLSTHRTIFLNIS 446

Query: 134 NVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMF 191
           +VND  P F    +E+F+P     +  PG ++  + A+D D G    ++ SL  P  +  
Sbjct: 447 DVNDNPPSFFQRSHEVFVPE----NNRPGDLLCSLAASDPDSGLNALISYSLLEPRNR-- 500

Query: 192 SINDSGHISIVDLSAL----------NTSTIQLVVVATDTGNPPRQASV 230
            ++ S  IS+   +             T T+Q  V A D GNPP  ++V
Sbjct: 501 DVSASSFISLNPQTGAVHATRSFDYEQTQTLQFEVQARDRGNPPLSSTV 549



 Score = 44.7 bits (104), Expect = 0.083,   Method: Compositional matrix adjust.
 Identities = 50/190 (26%), Positives = 83/190 (43%), Gaps = 15/190 (7%)

Query: 95  GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYE--L 149
           G +   +  DYE   + +F V A D     ++++ TV + V+++ND  P    P+     
Sbjct: 515 GAVHATRSFDYEQTQTLQFEVQARDRGNPPLSSTVTVRLFVLDLNDNAPAVLRPRARPGS 574

Query: 150 FLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIND-SGHISIVDLS 205
             P      +  G +I KV A D D G    +S   L  P   +F+++  +G +      
Sbjct: 575 LCPQALPPSVGAGHLITKVTAVDLDSGYNAWVSYQLLEAPDPSLFAVSRYAGEVRTAVPI 634

Query: 206 ALNTSTIQLVVVATDTGNPPRQASVPAIMHFPE---AIVQ--QASSKLNSGTSSTVLIIL 260
             +    +LV+V  D+G+PP   SV  ++   E    +V   + SS    G S   L  L
Sbjct: 635 PADLPPQKLVIVVKDSGSPPLSTSVTLLVSLEEDTHPVVPDLRESSAPREGESRLTL-YL 693

Query: 261 GVVLIVLGFV 270
            V L+ + FV
Sbjct: 694 AVSLVAICFV 703


>gi|426350358|ref|XP_004042744.1| PREDICTED: protocadherin gamma-C4 [Gorilla gorilla gorilla]
          Length = 871

 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 65/230 (28%), Positives = 104/230 (45%), Gaps = 22/230 (9%)

Query: 13  LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKP 72
           LV+ A+   N  R   A L VS    +     F ++ Y +S LE+ P   VL+ +  + P
Sbjct: 210 LVLTAVDGGNPPRSGTAELRVSVLDVNDNAPAFQQSSYRISVLESAPAGMVLIQLNASDP 269

Query: 73  RDL----RVKYWLSNDYGER----FSI-SRQGDISLMQCLDYETEDSYRFTVYATD---T 120
            DL     V ++ S    +R    FS+    G ++L+  LD+E+E+ Y F V A D    
Sbjct: 270 -DLGPSGNVTFYFSGHTPDRVRNLFSLHPTTGKLTLLGPLDFESENYYEFDVRARDGGSP 328

Query: 121 LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVT 180
            M    ++ + +++VND  P          LP        PG+V+  +   D D G    
Sbjct: 329 AMEQHCSLRVDLLDVNDNAPYITVTSELGTLPE----SAEPGTVVALISVQDPDSGSNGD 384

Query: 181 LSLRGPYEKMFSINDS--GHISIVDLSALN---TSTIQLVVVATDTGNPP 225
           +SLR P    F++  +     S+V    L+    S+  ++V A+D GNPP
Sbjct: 385 VSLRIPDHLPFALKSAFRNQFSLVTAGPLDREAKSSYDIMVTASDAGNPP 434



 Score = 47.4 bits (111), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 45/169 (26%), Positives = 78/169 (46%), Gaps = 27/169 (15%)

Query: 77  VKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVV 133
           + + L + +  +FS+   G       LD E + SY   V A+D     ++T  T+ +++ 
Sbjct: 393 LPFALKSAFRNQFSLVTAGP------LDREAKSSYDIMVTASDAGNPPLSTHRTIFLNIS 446

Query: 134 NVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMF 191
           +VND  P F    +E+F+P     +  PG ++  + A+D D G    ++ SL  P  +  
Sbjct: 447 DVNDNPPSFFQRSHEVFVPE----NNRPGDLLCSLAASDPDSGLNALISYSLLEPRNR-- 500

Query: 192 SINDSGHISIVDLSAL----------NTSTIQLVVVATDTGNPPRQASV 230
            ++ S  IS+   +             T T+Q  V A D GNPP  ++V
Sbjct: 501 DVSASSFISLNPQTGAVHATRSFDYEQTQTLQFEVQARDRGNPPLSSTV 549



 Score = 44.7 bits (104), Expect = 0.079,   Method: Compositional matrix adjust.
 Identities = 50/190 (26%), Positives = 83/190 (43%), Gaps = 15/190 (7%)

Query: 95  GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYE--L 149
           G +   +  DYE   + +F V A D     ++++ TV + V+++ND  P    P+     
Sbjct: 515 GAVHATRSFDYEQTQTLQFEVQARDRGNPPLSSTVTVRLFVLDLNDNAPAVLRPRARPGS 574

Query: 150 FLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIND-SGHISIVDLS 205
             P      +  G +I KV A D D G    +S   L  P   +F+++  +G +      
Sbjct: 575 LCPQALPPSVGAGHLITKVTAVDLDSGYNAWVSYQLLEAPDPSLFAVSRYAGEVRTAVPI 634

Query: 206 ALNTSTIQLVVVATDTGNPPRQASVPAIMHFPE---AIVQ--QASSKLNSGTSSTVLIIL 260
             +    +LV+V  D+G+PP   SV  ++   E    +V   + SS    G S   L  L
Sbjct: 635 PADLPPQKLVIVVKDSGSPPLSTSVTLLVSLEEDTHPVVPDLRESSAPREGESHLTL-YL 693

Query: 261 GVVLIVLGFV 270
            V L+ + FV
Sbjct: 694 AVSLVAICFV 703


>gi|403255734|ref|XP_003920566.1| PREDICTED: protocadherin gamma-C4-like isoform 2 [Saimiri
           boliviensis boliviensis]
          Length = 938

 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 65/230 (28%), Positives = 104/230 (45%), Gaps = 22/230 (9%)

Query: 13  LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKP 72
           LV+ A+   N  R   A L VS    +     F ++ Y +S LE+ P   VL+ +  + P
Sbjct: 210 LVLTAVDGGNPPRSGTAELRVSVLDVNDNAPAFQQSSYRISVLESAPAGMVLIQLNASDP 269

Query: 73  RDL----RVKYWLSNDYGER----FSI-SRQGDISLMQCLDYETEDSYRFTVYATD---T 120
            DL     V ++ S    +R    FS+    G ++L+  LD+E+E+ Y F V A D    
Sbjct: 270 -DLGPSGNVTFYFSGHTPDRVRNLFSLHPTTGKLTLLGPLDFESENYYEFDVRARDGGSP 328

Query: 121 LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVT 180
            M    ++ + +++VND  P          LP        PG+V+  +   D D G    
Sbjct: 329 AMEQHCSLRVDLLDVNDNAPYITVTSELGTLPE----SAEPGTVVALISVQDPDSGSNGD 384

Query: 181 LSLRGPYEKMFSINDS--GHISIVDLSALN---TSTIQLVVVATDTGNPP 225
           +SLR P    F++  +     S+V    L+    S+  ++V A+D GNPP
Sbjct: 385 VSLRIPDHLPFALKSAFRNQFSLVTAGPLDREAKSSYDIMVTASDAGNPP 434



 Score = 46.6 bits (109), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 45/169 (26%), Positives = 78/169 (46%), Gaps = 27/169 (15%)

Query: 77  VKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVV 133
           + + L + +  +FS+   G       LD E + SY   V A+D     ++T  T+ +++ 
Sbjct: 393 LPFALKSAFRNQFSLVTAGP------LDREAKSSYDIMVTASDAGNPPLSTHRTIFLNIS 446

Query: 134 NVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMF 191
           +VND  P F    +E+F+P     +  PG ++  + A+D D G    ++ SL  P  +  
Sbjct: 447 DVNDNPPSFFQRSHEVFVPE----NNRPGDLLCSLAASDPDSGLNALISYSLLEPRNR-- 500

Query: 192 SINDSGHISIVDLSAL----------NTSTIQLVVVATDTGNPPRQASV 230
            ++ S  IS+   +             T T+Q  V A D GNPP  ++V
Sbjct: 501 DVSASSFISLNPQTGAVHATRSFDYEQTQTLQFEVQARDRGNPPLSSTV 549



 Score = 43.5 bits (101), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 50/190 (26%), Positives = 83/190 (43%), Gaps = 15/190 (7%)

Query: 95  GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYE--L 149
           G +   +  DYE   + +F V A D     ++++ TV + V+++ND  P    P+     
Sbjct: 515 GAVHATRSFDYEQTQTLQFEVQARDRGNPPLSSTVTVRLFVLDLNDNAPAVLRPRARPGS 574

Query: 150 FLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIND-SGHISIVDLS 205
             P      +  G +I KV A D D G    +S   L  P   +F+++  +G +      
Sbjct: 575 LCPQALPPSVGAGHLITKVTAVDLDSGYNAWVSYQLLEAPDPSLFAVSRYAGEVRTAVPI 634

Query: 206 ALNTSTIQLVVVATDTGNPPRQASVPAIMHFPE---AIVQ--QASSKLNSGTSSTVLIIL 260
             +    +LV+V  D+G+PP   SV  ++   E    +V   + SS    G S   L  L
Sbjct: 635 PADLPPQKLVIVIKDSGSPPLSTSVTLLVSLEEDTHPVVPDLRESSAPREGESRLTL-YL 693

Query: 261 GVVLIVLGFV 270
            V L+ + FV
Sbjct: 694 AVSLVAICFV 703


>gi|395736301|ref|XP_003776733.1| PREDICTED: protocadherin gamma-C4 [Pongo abelii]
          Length = 871

 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 65/230 (28%), Positives = 104/230 (45%), Gaps = 22/230 (9%)

Query: 13  LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKP 72
           LV+ A+   N  R   A L VS    +     F ++ Y +S LE+ P   VL+ +  + P
Sbjct: 210 LVLTAVDGGNPPRSGTAELRVSVLDVNDNAPAFQQSSYRISVLESAPAGMVLIQLNASDP 269

Query: 73  RDL----RVKYWLSNDYGER----FSI-SRQGDISLMQCLDYETEDSYRFTVYATD---T 120
            DL     V ++ S    +R    FS+    G ++L+  LD+E+E+ Y F V A D    
Sbjct: 270 -DLGPSGNVTFYFSGHTPDRVRNLFSLHPTTGKLTLLGPLDFESENYYEFDVRARDGGSP 328

Query: 121 LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVT 180
            M    ++ + +++VND  P          LP        PG+V+  +   D D G    
Sbjct: 329 AMEQHCSLRVDLLDVNDNAPYITVTSELGTLPE----SAEPGTVVALISVQDPDSGSNGD 384

Query: 181 LSLRGPYEKMFSINDS--GHISIVDLSALN---TSTIQLVVVATDTGNPP 225
           +SLR P    F++  +     S+V    L+    S+  ++V A+D GNPP
Sbjct: 385 VSLRIPDHLPFALKSAFRNQFSLVTAGPLDREAKSSYDIMVTASDAGNPP 434



 Score = 47.0 bits (110), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 45/169 (26%), Positives = 78/169 (46%), Gaps = 27/169 (15%)

Query: 77  VKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVV 133
           + + L + +  +FS+   G       LD E + SY   V A+D     ++T  T+ +++ 
Sbjct: 393 LPFALKSAFRNQFSLVTAGP------LDREAKSSYDIMVTASDAGNPPLSTHRTIFLNIS 446

Query: 134 NVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMF 191
           +VND  P F    +E+F+P     +  PG ++  + A+D D G    ++ SL  P  +  
Sbjct: 447 DVNDNPPSFFQRSHEVFVPE----NNRPGDLLCSLAASDPDSGLNALISYSLLEPRNR-- 500

Query: 192 SINDSGHISIVDLSAL----------NTSTIQLVVVATDTGNPPRQASV 230
            ++ S  IS+   +             T T+Q  V A D GNPP  ++V
Sbjct: 501 DVSASSFISLNPQTGAVHATRSFDYEQTQTLQFEVQARDRGNPPLSSTV 549



 Score = 44.7 bits (104), Expect = 0.088,   Method: Compositional matrix adjust.
 Identities = 50/190 (26%), Positives = 83/190 (43%), Gaps = 15/190 (7%)

Query: 95  GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYE--L 149
           G +   +  DYE   + +F V A D     ++++ TV + V+++ND  P    P+     
Sbjct: 515 GAVHATRSFDYEQTQTLQFEVQARDRGNPPLSSTVTVRLFVLDLNDNAPAVLRPRARPGS 574

Query: 150 FLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIND-SGHISIVDLS 205
             P      +  G +I KV A D D G    +S   L  P   +F+++  +G +      
Sbjct: 575 LCPQALPPSVGAGHLITKVTAVDLDSGYNAWVSYQLLEAPDPSLFAVSRYAGEVRTAVPI 634

Query: 206 ALNTSTIQLVVVATDTGNPPRQASVPAIMHFPE---AIVQ--QASSKLNSGTSSTVLIIL 260
             +    +LV+V  D+G+PP   SV  ++   E    +V   + SS    G S   L  L
Sbjct: 635 PADLPPQKLVIVVKDSGSPPLSTSVTLLVSLEEDTHPVVPDLRESSAPREGESRLTL-YL 693

Query: 261 GVVLIVLGFV 270
            V L+ + FV
Sbjct: 694 AVSLVAICFV 703


>gi|332234776|ref|XP_003266579.1| PREDICTED: protocadherin gamma-C4 [Nomascus leucogenys]
          Length = 871

 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 65/230 (28%), Positives = 104/230 (45%), Gaps = 22/230 (9%)

Query: 13  LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKP 72
           LV+ A+   N  R   A L VS    +     F ++ Y +S LE+ P   VL+ +  + P
Sbjct: 210 LVLTAVDGGNPPRSGTAELRVSVLDVNDNAPAFQQSSYRISVLESAPAGMVLIQLNASDP 269

Query: 73  RDL----RVKYWLSNDYGER----FSI-SRQGDISLMQCLDYETEDSYRFTVYATD---T 120
            DL     V ++ S    +R    FS+    G ++L+  LD+E+E+ Y F V A D    
Sbjct: 270 -DLGPSGNVTFYFSGHTPDRVRNLFSLHPTTGKLTLLGPLDFESENYYEFDVRARDGGSP 328

Query: 121 LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVT 180
            M    ++ + +++VND  P          LP        PG+V+  +   D D G    
Sbjct: 329 AMEQHCSLRVDLLDVNDNAPYITVTSELGTLPE----SAEPGTVVALISVQDPDSGSNGD 384

Query: 181 LSLRGPYEKMFSINDS--GHISIVDLSALN---TSTIQLVVVATDTGNPP 225
           +SLR P    F++  +     S+V    L+    S+  ++V A+D GNPP
Sbjct: 385 VSLRIPDHLPFALKSAFRNQFSLVTAGPLDREAKSSYDIMVTASDAGNPP 434



 Score = 47.0 bits (110), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 45/169 (26%), Positives = 78/169 (46%), Gaps = 27/169 (15%)

Query: 77  VKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVV 133
           + + L + +  +FS+   G       LD E + SY   V A+D     ++T  T+ +++ 
Sbjct: 393 LPFALKSAFRNQFSLVTAGP------LDREAKSSYDIMVTASDAGNPPLSTHRTIFLNIS 446

Query: 134 NVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMF 191
           +VND  P F    +E+F+P     +  PG ++  + A+D D G    ++ SL  P  +  
Sbjct: 447 DVNDNPPSFFQRSHEVFVPE----NNRPGDLLCSLAASDPDSGLNALISYSLLEPRNR-- 500

Query: 192 SINDSGHISIVDLSAL----------NTSTIQLVVVATDTGNPPRQASV 230
            ++ S  IS+   +             T T+Q  V A D GNPP  ++V
Sbjct: 501 DVSASSFISLNPQTGAVHATRSFDYEQTQTLQFEVQARDRGNPPLSSTV 549



 Score = 44.7 bits (104), Expect = 0.086,   Method: Compositional matrix adjust.
 Identities = 50/190 (26%), Positives = 83/190 (43%), Gaps = 15/190 (7%)

Query: 95  GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYE--L 149
           G +   +  DYE   + +F V A D     ++++ TV + V+++ND  P    P+     
Sbjct: 515 GAVHATRSFDYEQTQTLQFEVQARDRGNPPLSSTVTVRLFVLDLNDNAPAVLRPRARPGS 574

Query: 150 FLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIND-SGHISIVDLS 205
             P      +  G +I KV A D D G    +S   L  P   +F+++  +G +      
Sbjct: 575 LCPQALPPSVGAGHLITKVTAVDLDSGYNAWVSYQLLEAPDPSLFAVSRYAGEVRTAVPI 634

Query: 206 ALNTSTIQLVVVATDTGNPPRQASVPAIMHFPE---AIVQ--QASSKLNSGTSSTVLIIL 260
             +    +LV+V  D+G+PP   SV  ++   E    +V   + SS    G S   L  L
Sbjct: 635 PADLPPQKLVIVVKDSGSPPLSTSVTLLVSLEEDTHPVVPDLRESSAPREGESRLTL-YL 693

Query: 261 GVVLIVLGFV 270
            V L+ + FV
Sbjct: 694 AVSLVAICFV 703


>gi|133777266|gb|AAI01037.1| PCDHGC4 protein [Homo sapiens]
          Length = 870

 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 65/230 (28%), Positives = 104/230 (45%), Gaps = 22/230 (9%)

Query: 13  LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKP 72
           LV+ A+   N  R   A L VS    +     F ++ Y +S LE+ P   VL+ +  + P
Sbjct: 209 LVLTAVDGGNPPRSGTAELRVSVLDVNDNAPAFQQSSYRISVLESAPAGMVLIQLNASDP 268

Query: 73  RDL----RVKYWLSNDYGER----FSI-SRQGDISLMQCLDYETEDSYRFTVYATD---T 120
            DL     V ++ S    +R    FS+    G ++L+  LD+E+E+ Y F V A D    
Sbjct: 269 -DLGPSGNVTFYFSGHTPDRVRNLFSLHPTTGKLTLLGPLDFESENYYEFDVRARDGGSP 327

Query: 121 LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVT 180
            M    ++ + +++VND  P          LP        PG+V+  +   D D G    
Sbjct: 328 AMEQHCSLRVDLLDVNDNAPYITVTSELGTLPE----SAEPGTVVALISVQDPDSGSNGD 383

Query: 181 LSLRGPYEKMFSINDS--GHISIVDLSALN---TSTIQLVVVATDTGNPP 225
           +SLR P    F++  +     S+V    L+    S+  ++V A+D GNPP
Sbjct: 384 VSLRIPDHLPFALKSAFRNQFSLVTAGPLDREAKSSYDIMVTASDAGNPP 433



 Score = 47.0 bits (110), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 45/169 (26%), Positives = 78/169 (46%), Gaps = 27/169 (15%)

Query: 77  VKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVV 133
           + + L + +  +FS+   G       LD E + SY   V A+D     ++T  T+ +++ 
Sbjct: 392 LPFALKSAFRNQFSLVTAGP------LDREAKSSYDIMVTASDAGNPPLSTHRTIFLNIS 445

Query: 134 NVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMF 191
           +VND  P F    +E+F+P     +  PG ++  + A+D D G    ++ SL  P  +  
Sbjct: 446 DVNDNPPSFFQRSHEVFVPE----NNRPGDLLCSLAASDPDSGLNALISYSLLEPRNR-- 499

Query: 192 SINDSGHISIVDLSAL----------NTSTIQLVVVATDTGNPPRQASV 230
            ++ S  IS+   +             T T+Q  V A D GNPP  ++V
Sbjct: 500 DVSASSFISLNPQTGAVHATRSFDYEQTQTLQFEVQARDRGNPPLSSTV 548



 Score = 44.7 bits (104), Expect = 0.083,   Method: Compositional matrix adjust.
 Identities = 50/190 (26%), Positives = 83/190 (43%), Gaps = 15/190 (7%)

Query: 95  GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYE--L 149
           G +   +  DYE   + +F V A D     ++++ TV + V+++ND  P    P+     
Sbjct: 514 GAVHATRSFDYEQTQTLQFEVQARDRGNPPLSSTVTVRLFVLDLNDNAPAVLRPRARPGS 573

Query: 150 FLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIND-SGHISIVDLS 205
             P      +  G +I KV A D D G    +S   L  P   +F+++  +G +      
Sbjct: 574 LCPQALPPSVGAGHLITKVTAVDLDSGYNAWVSYQLLEAPDPSLFAVSRYAGEVRTAVPI 633

Query: 206 ALNTSTIQLVVVATDTGNPPRQASVPAIMHFPE---AIVQ--QASSKLNSGTSSTVLIIL 260
             +    +LV+V  D+G+PP   SV  ++   E    +V   + SS    G S   L  L
Sbjct: 634 PADLPPQKLVIVVKDSGSPPLSTSVTLLVSLEEDTHPVVPDLRESSAPREGESRLTL-YL 692

Query: 261 GVVLIVLGFV 270
            V L+ + FV
Sbjct: 693 AVSLVAICFV 702


>gi|347543903|gb|AEP02524.1| CDH23, partial [Hipposideros larvatus]
          Length = 3276

 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 60/194 (30%), Positives = 85/194 (43%), Gaps = 18/194 (9%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDLR---VKYWLSNDYGERFSIS-RQGDISLM 100
            F +  Y  +  E++PV  V+L VT           ++Y L N  G +FSI+   GDI ++
Sbjct: 2394 FDQPSYQEAIFEDVPVGTVILRVTATDADSGNYAVIEYGLGNGEG-KFSINPTTGDIYVL 2452

Query: 101  QCLDYETEDSYRFTVYATD-------TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
              LD E +D Y  T  A D            S  V I V++VND  P F  PQY   +  
Sbjct: 2453 SSLDREKKDHYILTAIAKDNPGDIASNRRENSVQVVIQVLDVNDCRPEFSKPQYSTSV-- 2510

Query: 154  IPLADLTPGSVIGKVEAADGDKGDRVTL--SLRGPYEKMFSINDSGHISIVDLSALNTST 211
                +  PG+ +  + A D D+G    L  SL GP  + F ++    +        +   
Sbjct: 2511 --YENEPPGTSVITMMATDQDEGSNAELAYSLEGPGMEAFRVDKDSGLVTTQRPLRSYER 2568

Query: 212  IQLVVVATDTGNPP 225
              L VVATD G PP
Sbjct: 2569 FNLTVVATDGGEPP 2582



 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 65/207 (31%), Positives = 96/207 (46%), Gaps = 22/207 (10%)

Query: 45  FSKNEYSVSALENLPVNYVLLTV--TTNKPRDL-RVKYWLSNDYGERFSISRQ-GDISLM 100
           FS+  Y+VS  EN+ V   +LTV  T N       V Y+ S D  +RFS+ +  G I L+
Sbjct: 452 FSQPLYNVSLYENVTVGTSVLTVLATDNDAGTFGEVNYYFS-DNADRFSLDKDTGLILLI 510

Query: 101 QCLDYETEDSYRFTVYATDTL-MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADL 159
             LDYE    +  TV A D     T+  V I+V++VND  P F+   Y        L + 
Sbjct: 511 AKLDYELIQRFTLTVIARDGGGEETTGRVRINVLDVNDNVPTFQKDAY-----MGALREN 565

Query: 160 TPG-SVIGKVEAADGDK--GDRVTLSL-----RGPYEKMFSINDSGHISI---VDLSALN 208
            P  + + ++ A D D    + +T S+      G Y  +      G IS+   +D   + 
Sbjct: 566 EPSVTQLVRLRATDEDSPPNNLITYSIVFASSFGSYFDISVYEGYGVISVNHPLDYEQIP 625

Query: 209 TSTIQLVVVATDTGNPPRQASVPAIMH 235
              I L V+A D GNPP  ++VP  + 
Sbjct: 626 NGMIYLTVMAKDAGNPPLNSTVPVTIE 652



 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 47/141 (33%), Positives = 66/141 (46%), Gaps = 15/141 (10%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDY---GERFSI-SRQGDISLM 100
           F    YSV   E+ PV   +  V    P DL     +   +    E F+I S +G ++++
Sbjct: 124 FHNQPYSVRIPEDTPVGTPIFIVNATDP-DLGAGGSVLYSFQPPSEFFAIDSARGIVTVI 182

Query: 101 QCLDYETEDSYRFTVYATDT----LMTTSATVNISVVNVNDWDPRF-RYPQYELFLPHIP 155
           Q LDYET  SY+ TVYAT       ++T A + I + +V D DP F   P       H P
Sbjct: 183 QELDYETTQSYQLTVYATGQDKTRPLSTLANLAIIITDVQDMDPIFVNLPYSTNIYEHSP 242

Query: 156 LADLTPGSVIGKVEAADGDKG 176
                PG+ +  + A D DKG
Sbjct: 243 -----PGTTVRVITAIDQDKG 258



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 60/204 (29%), Positives = 98/204 (48%), Gaps = 25/204 (12%)

Query: 43   LQFSKNEYSVSALENLPVNYVLLTVTTNKPRDL-----RVKYWLSNDYGERFSI-SRQGD 96
            +QFS   Y ++ LENL +   ++ V    P ++     R   + S      F I S  G 
Sbjct: 1303 VQFSNASYEIAILENLALGTEIVRVQAYSPDNINPITYRFDTYTSAQAKGLFKIDSFTGV 1362

Query: 97   ISLMQCLDYETEDSYRFTVYATD--TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHI 154
            I++   +D E  D +  TV A D  + + ++A V I+V++ ND  PRF  P  +  +  +
Sbjct: 1363 ITVKGLVDREKADFHTLTVVADDGGSKVDSTAKVYITVLDENDNSPRFD-PTSDSMI-SV 1420

Query: 155  PLADLTPGSVIGKVEAADGDKGD--RVTLSLR-----GPYEKMFSINDS-GHISI---VD 203
            P  D   G  +  V+A D D G   +V  SL      G +E + + NDS G + +   +D
Sbjct: 1421 P-EDCPVGQRVATVKAHDPDAGSNGQVVFSLASGNIAGAFE-IVTTNDSVGEVFVAKPLD 1478

Query: 204  LSALNTSTIQLVVVATDTGNPPRQ 227
               L+   ++  +VA+D G PPR+
Sbjct: 1479 REELDHYILK--IVASDCGTPPRK 1500



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 63/210 (30%), Positives = 94/210 (44%), Gaps = 28/210 (13%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRDLR------VKYWLSNDYGERFSISRQGDIS 98
           FSK  Y+VS +E++     +L V        R      + Y L      R S SR G+I+
Sbjct: 663 FSKPAYTVSVVESIMAGATVLFVNATDLDGSREYGQESIIYSLEGSSQFRIS-SRSGEIT 721

Query: 99  LMQCLDYETEDSYRFTVYATD-----TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
               LD ET+  Y   V A D        T  ATVNI+++++ND  P ++   Y     +
Sbjct: 722 TSTLLDRETKAEYILIVRAVDGGVGHNQKTGIATVNITLLDINDNHPTWKDAPY-----Y 776

Query: 154 IPLADLT-PGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSIND-SGHIS----IVDLSA 206
           I L ++T P S +  V A D D G+  TL     P  K +S+N  +G I     ++D   
Sbjct: 777 INLVEMTPPDSDVTTVVAVDPDLGENGTLVYSIDPPNKFYSLNSTTGKIRTTHVMLDREN 836

Query: 207 LNTSTIQL----VVVATDTGNPPRQASVPA 232
            +    +L    +V   D G PP +A+  A
Sbjct: 837 PDPHEAELMRKIIVSVRDCGRPPLKATSSA 866



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 53/161 (32%), Positives = 75/161 (46%), Gaps = 33/161 (20%)

Query: 65   LTVTTNKPRDLRVKYWLS---NDYG---------------ERFSIS-RQGDISLMQCLDY 105
            ++V+ + PRD RV  WL+   ND G                +FS+  R   +  +  LD 
Sbjct: 994  VSVSEDVPRDFRV-VWLNCTDNDIGLNAELSYFITGGNVDGKFSVGYRDAVVRTVVGLDR 1052

Query: 106  ETEDSYRFTVYATDT-----LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLT 160
            ET  SY   + A D        T +ATV I+V++VND  P F    YE  +P     D+ 
Sbjct: 1053 ETTASYTLILEAIDNGPVGKRRTGTATVFITVLDVNDNRPIFLQSSYEASVPE----DIP 1108

Query: 161  PGSVIGKVEAADGDKGD--RVTLS-LRGPYEKMFSIN-DSG 197
             G  I ++ A D D+G+  RV    L+G Y   F I+ DSG
Sbjct: 1109 EGHSIVQLTATDADEGEFGRVWYRILQGNYGNFFEIDVDSG 1149



 Score = 43.9 bits (102), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 54/199 (27%), Positives = 89/199 (44%), Gaps = 26/199 (13%)

Query: 44  QFSKNEYSVSALENLPVNYVL--LTVTTNKPRDLRV----KYWLSNDYGERF-----SIS 92
           +F+ +EYSV+  E   V + L       +K  +L +    + +L  +    F     S+ 
Sbjct: 339 EFNSSEYSVAITELAQVGFALPLFIQVVDKDENLGLNSMFEVYLVGNNSHHFIISPTSVQ 398

Query: 93  RQGDISLMQC--LDYETEDSYRFTVYATDTL--MTTSATVNISVVNVNDWDPRFRYPQYE 148
            + DI +     LDYET D Y F ++A +++      A V I+++N ND  P F  P Y 
Sbjct: 399 GKADIRIRVAIPLDYETVDRYDFDLFANESVPDHVGYAKVKITLINENDNRPIFSQPLYN 458

Query: 149 LFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDSGHISIVDLSA 206
           + L      ++T G+ +  V A D D G    V        ++     D+G I ++  + 
Sbjct: 459 VSL----YENVTVGTSVLTVLATDNDAGTFGEVNYYFSDNADRFSLDKDTGLILLI--AK 512

Query: 207 LNTSTIQ---LVVVATDTG 222
           L+   IQ   L V+A D G
Sbjct: 513 LDYELIQRFTLTVIARDGG 531



 Score = 42.4 bits (98), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 34/107 (31%), Positives = 50/107 (46%), Gaps = 8/107 (7%)

Query: 92   SRQGDISLMQCLDYETEDSYRFTVYATDTLMTTSAT---VNISVVNVNDWDPRFRYPQYE 148
            S  G +   + +DYE      FTV A+D      A    V + +V++ND +P F  P Y+
Sbjct: 2341 SSAGKVIANRTVDYEEVHWLNFTVRASDNGSPPRAAEIPVYLEIVDINDNNPIFDQPSYQ 2400

Query: 149  LFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSIN 194
              +      D+  G+VI +V A D D G+   +    G  E  FSIN
Sbjct: 2401 EAI----FEDVPVGTVILRVTATDADSGNYAVIEYGLGNGEGKFSIN 2443



 Score = 37.7 bits (86), Expect = 9.8,   Method: Compositional matrix adjust.
 Identities = 42/129 (32%), Positives = 56/129 (43%), Gaps = 9/129 (6%)

Query: 95  GDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHI 154
           G + L Q LD ET   +      +D     +  VNI V +VND  P F    Y + +P  
Sbjct: 77  GVVWLRQPLDRETISEFIVEFSVSDHQGVITRKVNIQVGDVNDNAPTFHNQPYSVRIPE- 135

Query: 155 PLADLTPGSVIGKVEAADGD--KGDRVTLSLRGPYEKMFSINDSGHISIV--DLSALNTS 210
              D   G+ I  V A D D   G  V  S + P E  F+I+ +  I  V  +L    T 
Sbjct: 136 ---DTPVGTPIFIVNATDPDLGAGGSVLYSFQPPSE-FFAIDSARGIVTVIQELDYETTQ 191

Query: 211 TIQLVVVAT 219
           + QL V AT
Sbjct: 192 SYQLTVYAT 200


>gi|380800259|gb|AFE72005.1| protocadherin gamma-C4 isoform 1 precursor, partial [Macaca
           mulatta]
          Length = 936

 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 65/230 (28%), Positives = 104/230 (45%), Gaps = 22/230 (9%)

Query: 13  LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKP 72
           LV+ A+   N  R   A L VS    +     F ++ Y +S LE+ P   VL+ +  + P
Sbjct: 208 LVLTAVDGGNPPRSGTAELRVSVLDVNDNAPAFQQSSYRISVLESAPAGMVLIQLNASDP 267

Query: 73  RDL----RVKYWLSNDYGER----FSI-SRQGDISLMQCLDYETEDSYRFTVYATD---T 120
            DL     V ++ S    +R    FS+    G ++L+  LD+E+E+ Y F V A D    
Sbjct: 268 -DLGPSGNVTFYFSGHTPDRVRNLFSLHPTTGKLTLLGPLDFESENYYEFDVRARDGGSP 326

Query: 121 LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVT 180
            M    ++ + +++VND  P          LP        PG+V+  +   D D G    
Sbjct: 327 AMEQHCSLRVDLLDVNDNAPYITVTSELGTLPE----SAEPGTVVALISVQDPDSGSNGD 382

Query: 181 LSLRGPYEKMFSINDS--GHISIVDLSALN---TSTIQLVVVATDTGNPP 225
           +SLR P    F++  +     S+V    L+    S+  ++V A+D GNPP
Sbjct: 383 VSLRIPDHLPFALKSAFRNQFSLVTAGPLDREAKSSYDIMVTASDAGNPP 432



 Score = 46.6 bits (109), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 45/169 (26%), Positives = 78/169 (46%), Gaps = 27/169 (15%)

Query: 77  VKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVV 133
           + + L + +  +FS+   G       LD E + SY   V A+D     ++T  T+ +++ 
Sbjct: 391 LPFALKSAFRNQFSLVTAGP------LDREAKSSYDIMVTASDAGNPPLSTHRTIFLNIS 444

Query: 134 NVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMF 191
           +VND  P F    +E+F+P     +  PG ++  + A+D D G    ++ SL  P  +  
Sbjct: 445 DVNDNPPSFFQRSHEVFVPE----NNRPGDLLCSLAASDPDSGLNALISYSLLEPRNR-- 498

Query: 192 SINDSGHISIVDLSAL----------NTSTIQLVVVATDTGNPPRQASV 230
            ++ S  IS+   +             T T+Q  V A D GNPP  ++V
Sbjct: 499 DVSASSFISLNPQTGAVHATRSFDYEQTQTLQFEVQARDRGNPPLSSTV 547



 Score = 44.3 bits (103), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 50/190 (26%), Positives = 83/190 (43%), Gaps = 15/190 (7%)

Query: 95  GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYE--L 149
           G +   +  DYE   + +F V A D     ++++ TV + V+++ND  P    P+     
Sbjct: 513 GAVHATRSFDYEQTQTLQFEVQARDRGNPPLSSTVTVRLFVLDLNDNAPAVLRPRARPGS 572

Query: 150 FLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIND-SGHISIVDLS 205
             P      +  G +I KV A D D G    +S   L  P   +F+++  +G +      
Sbjct: 573 LCPQALPPSVGAGHLITKVTAVDLDSGYNAWVSYQLLEAPDPSLFAVSRYAGEVRTAVPI 632

Query: 206 ALNTSTIQLVVVATDTGNPPRQASVPAIMHFPE---AIVQ--QASSKLNSGTSSTVLIIL 260
             +    +LV+V  D+G+PP   SV  ++   E    +V   + SS    G S   L  L
Sbjct: 633 PADLPPQKLVIVVKDSGSPPLSTSVTLLVSLEEDTHPVVPDLRESSAPREGESRLTL-YL 691

Query: 261 GVVLIVLGFV 270
            V L+ + FV
Sbjct: 692 AVSLVAICFV 701


>gi|127139226|ref|NP_001076023.1| protocadherin gamma-C4 [Pan troglodytes]
          Length = 938

 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 65/230 (28%), Positives = 104/230 (45%), Gaps = 22/230 (9%)

Query: 13  LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKP 72
           LV+ A+   N  R   A L VS    +     F ++ Y +S LE+ P   VL+ +  + P
Sbjct: 210 LVLTAVDGGNPPRSGTAELRVSVLDVNDNAPAFQQSSYRISVLESAPAGMVLIQLNASDP 269

Query: 73  RDL----RVKYWLSNDYGER----FSI-SRQGDISLMQCLDYETEDSYRFTVYATD---T 120
            DL     V ++ S    +R    FS+    G ++L+  LD+E+E+ Y F V A D    
Sbjct: 270 -DLGPSGNVTFYFSGHTPDRVRNLFSLHPTTGKLTLLGPLDFESENYYEFDVRARDGGSP 328

Query: 121 LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVT 180
            M    ++ + +++VND  P          LP        PG+V+  +   D D G    
Sbjct: 329 AMEQHCSLRVDLLDVNDNAPYITVTSELGTLPE----SAEPGTVVALISVQDPDSGSNGD 384

Query: 181 LSLRGPYEKMFSINDS--GHISIVDLSALN---TSTIQLVVVATDTGNPP 225
           +SLR P    F++  +     S+V    L+    S+  ++V A+D GNPP
Sbjct: 385 VSLRIPDHLPFALKSAFRNQFSLVTAGPLDREAKSSYDIMVTASDAGNPP 434



 Score = 46.6 bits (109), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 45/169 (26%), Positives = 78/169 (46%), Gaps = 27/169 (15%)

Query: 77  VKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVV 133
           + + L + +  +FS+   G       LD E + SY   V A+D     ++T  T+ +++ 
Sbjct: 393 LPFALKSAFRNQFSLVTAGP------LDREAKSSYDIMVTASDAGNPPLSTHRTIFLNIS 446

Query: 134 NVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMF 191
           +VND  P F    +E+F+P     +  PG ++  + A+D D G    ++ SL  P  +  
Sbjct: 447 DVNDNPPSFFQRSHEVFVPE----NNRPGDLLCSLAASDPDSGLNALISYSLLEPRNR-- 500

Query: 192 SINDSGHISIVDLSAL----------NTSTIQLVVVATDTGNPPRQASV 230
            ++ S  IS+   +             T T+Q  V A D GNPP  ++V
Sbjct: 501 DVSASSFISLNPQTGAVHATRSFDYEQTQTLQFEVQARDRGNPPLSSTV 549



 Score = 44.3 bits (103), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 50/190 (26%), Positives = 83/190 (43%), Gaps = 15/190 (7%)

Query: 95  GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYE--L 149
           G +   +  DYE   + +F V A D     ++++ TV + V+++ND  P    P+     
Sbjct: 515 GAVHATRSFDYEQTQTLQFEVQARDRGNPPLSSTVTVRLFVLDLNDNAPAVLRPRARPGS 574

Query: 150 FLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIND-SGHISIVDLS 205
             P      +  G +I KV A D D G    +S   L  P   +F+++  +G +      
Sbjct: 575 LCPQALPPSVGAGHLITKVTAVDLDSGYNAWVSYQLLEAPDPSLFAVSRYAGEVRTAVPI 634

Query: 206 ALNTSTIQLVVVATDTGNPPRQASVPAIMHFPE---AIVQ--QASSKLNSGTSSTVLIIL 260
             +    +LV+V  D+G+PP   SV  ++   E    +V   + SS    G S   L  L
Sbjct: 635 PADLPPQKLVIVVKDSGSPPLSTSVTLLVSLEEDTHPVVPDLRESSAPREGESRLTL-YL 693

Query: 261 GVVLIVLGFV 270
            V L+ + FV
Sbjct: 694 AVSLVAICFV 703


>gi|11128025|ref|NP_061751.1| protocadherin gamma-C4 isoform 1 precursor [Homo sapiens]
 gi|37999827|sp|Q9Y5F7.1|PCDGL_HUMAN RecName: Full=Protocadherin gamma-C4; Short=PCDH-gamma-C4; Flags:
           Precursor
 gi|62510856|sp|Q5DRA3.1|PCDGL_PANTR RecName: Full=Protocadherin gamma-C4; Short=PCDH-gamma-C4; Flags:
           Precursor
 gi|5456982|gb|AAD43732.1| protocadherin gamma C4 [Homo sapiens]
 gi|119582353|gb|EAW61949.1| hCG1982215, isoform CRA_ab [Homo sapiens]
          Length = 938

 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 65/230 (28%), Positives = 104/230 (45%), Gaps = 22/230 (9%)

Query: 13  LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKP 72
           LV+ A+   N  R   A L VS    +     F ++ Y +S LE+ P   VL+ +  + P
Sbjct: 210 LVLTAVDGGNPPRSGTAELRVSVLDVNDNAPAFQQSSYRISVLESAPAGMVLIQLNASDP 269

Query: 73  RDL----RVKYWLSNDYGER----FSI-SRQGDISLMQCLDYETEDSYRFTVYATD---T 120
            DL     V ++ S    +R    FS+    G ++L+  LD+E+E+ Y F V A D    
Sbjct: 270 -DLGPSGNVTFYFSGHTPDRVRNLFSLHPTTGKLTLLGPLDFESENYYEFDVRARDGGSP 328

Query: 121 LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVT 180
            M    ++ + +++VND  P          LP        PG+V+  +   D D G    
Sbjct: 329 AMEQHCSLRVDLLDVNDNAPYITVTSELGTLPE----SAEPGTVVALISVQDPDSGSNGD 384

Query: 181 LSLRGPYEKMFSINDS--GHISIVDLSALN---TSTIQLVVVATDTGNPP 225
           +SLR P    F++  +     S+V    L+    S+  ++V A+D GNPP
Sbjct: 385 VSLRIPDHLPFALKSAFRNQFSLVTAGPLDREAKSSYDIMVTASDAGNPP 434



 Score = 46.6 bits (109), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 45/169 (26%), Positives = 78/169 (46%), Gaps = 27/169 (15%)

Query: 77  VKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVV 133
           + + L + +  +FS+   G       LD E + SY   V A+D     ++T  T+ +++ 
Sbjct: 393 LPFALKSAFRNQFSLVTAGP------LDREAKSSYDIMVTASDAGNPPLSTHRTIFLNIS 446

Query: 134 NVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMF 191
           +VND  P F    +E+F+P     +  PG ++  + A+D D G    ++ SL  P  +  
Sbjct: 447 DVNDNPPSFFQRSHEVFVPE----NNRPGDLLCSLAASDPDSGLNALISYSLLEPRNR-- 500

Query: 192 SINDSGHISIVDLSAL----------NTSTIQLVVVATDTGNPPRQASV 230
            ++ S  IS+   +             T T+Q  V A D GNPP  ++V
Sbjct: 501 DVSASSFISLNPQTGAVHATRSFDYEQTQTLQFEVQARDRGNPPLSSTV 549



 Score = 44.3 bits (103), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 50/190 (26%), Positives = 83/190 (43%), Gaps = 15/190 (7%)

Query: 95  GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYE--L 149
           G +   +  DYE   + +F V A D     ++++ TV + V+++ND  P    P+     
Sbjct: 515 GAVHATRSFDYEQTQTLQFEVQARDRGNPPLSSTVTVRLFVLDLNDNAPAVLRPRARPGS 574

Query: 150 FLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIND-SGHISIVDLS 205
             P      +  G +I KV A D D G    +S   L  P   +F+++  +G +      
Sbjct: 575 LCPQALPPSVGAGHLITKVTAVDLDSGYNAWVSYQLLEAPDPSLFAVSRYAGEVRTAVPI 634

Query: 206 ALNTSTIQLVVVATDTGNPPRQASVPAIMHFPE---AIVQ--QASSKLNSGTSSTVLIIL 260
             +    +LV+V  D+G+PP   SV  ++   E    +V   + SS    G S   L  L
Sbjct: 635 PADLPPQKLVIVVKDSGSPPLSTSVTLLVSLEEDTHPVVPDLRESSAPREGESRLTL-YL 693

Query: 261 GVVLIVLGFV 270
            V L+ + FV
Sbjct: 694 AVSLVAICFV 703


>gi|334311403|ref|XP_003339609.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 2-like [Monodelphis
            domestica]
          Length = 4351

 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 70/245 (28%), Positives = 102/245 (41%), Gaps = 32/245 (13%)

Query: 6    DFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQ--------------FSKNEYS 51
            DF   +  V   + Y++Q ++         A  S  E                FS+  YS
Sbjct: 2214 DFKTGVLTVTGPLDYESQTKHIFTVRATDTALGSFSEATVEVQVEDINDNPPVFSQLVYS 2273

Query: 52   VSALENLPVN---YVLLTVTTNKPRDLRVKYWLSNDYGERFSI----SRQGDISLMQCLD 104
                E LP       LL    +  R+  V YW+  D  E  S        G++S  Q LD
Sbjct: 2274 ALVSEGLPPQTPVIQLLASDQDSGRNKDVSYWILEDDSEDSSFFQIDESSGEMSTTQELD 2333

Query: 105  YETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTP 161
            YET+  +   V A D     ++    V ++V +VND  P FR PQYE  +  +     T 
Sbjct: 2334 YETQQQFYVKVRAVDNGVPPLSAETLVIVNVSDVNDNPPAFRQPQYEANVSEL----ATC 2389

Query: 162  GSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIND-SGHISIVDLSALNTSTIQLVVV 217
            G ++ KV+A D D GD   L    L G  ++ F+IN  SG IS+ +    +  +  L+ V
Sbjct: 2390 GQLVIKVQALDPDSGDTTRLEYLILSGNEDRHFTINSTSGIISMFNFCRKHLDSAYLLRV 2449

Query: 218  ATDTG 222
            A   G
Sbjct: 2450 AASDG 2454



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 47/167 (28%), Positives = 81/167 (48%), Gaps = 16/167 (9%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGER---FSISRQ-GDISLM 100
            F +  Y+  A+E  PVN+++  V+   P  L    W +   G+    F I    G + + 
Sbjct: 1345 FDEPHYNFDAVETDPVNHMVGMVSVEDPPGL---LWFNISGGDENMDFDIEMTTGSMVIA 1401

Query: 101  QCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLT 160
            + LD   + +Y  TV ATD   T +  V I ++ +N   P+F   QYE+ +P        
Sbjct: 1402 RQLDSRRKANYNLTVEATDGSRTITTQVFIQLIIINQHRPQFLEAQYEVKVPQ----GTP 1457

Query: 161  PGSVIGKVEAADGDKGDRVTLSLRGPYE----KMFSIN-DSGHISIV 202
            PG  + +V+A D DKG  +  +++G  +    K+F ++ +SG +  V
Sbjct: 1458 PGLELLRVQATDQDKGKNLVYTIQGSLDARSTKLFQLDPNSGSLVTV 1504



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 57/203 (28%), Positives = 98/203 (48%), Gaps = 23/203 (11%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWL-SNDYGERFSIS-RQGDIS 98
            +F ++ YSV   E++ V   +LTV+    + P +  + Y L + D    F+I  ++G++ 
Sbjct: 3316 KFPQDVYSVEVKEDVAVGETILTVSAVDGDGPLNSAITYSLVAGDQLGHFTIHPKKGELQ 3375

Query: 99   LMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFL-PHI 154
            + + LD+E   SY  T+ ATD+   ++   A VN+ V +VND  PRF    Y + +  + 
Sbjct: 3376 IAKHLDWEETSSYSLTLRATDSGQPVLYQDAVVNVEVADVNDNPPRFFQLNYSIVVQENA 3435

Query: 155  PLADLTPGSVIGKVEAADGDK---GDRVTLSL-RGPYEKMFSINDSGHISIVDLSALNTS 210
            PL     GS + ++  +D D    G   +  +  G     F + D G   +V  + LN  
Sbjct: 3436 PL-----GSRVLELVLSDRDSTKNGPPYSFHITEGNDGSAFRVTDDGW--LVTAAVLNRK 3488

Query: 211  TIQ---LVVVATDTGNPPRQASV 230
              +   L +  TD+G PP  +S 
Sbjct: 3489 FKEQYLLQIQVTDSGVPPLSSSA 3511



 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 56/193 (29%), Positives = 89/193 (46%), Gaps = 19/193 (9%)

Query: 44   QFSKNEYSVSALEN-LPVNYVLLTVTTNKPRDLR--VKYWLSNDYGERFSIS-RQGDISL 99
            Q +K  YS    E+ LP +++L    T+    +   V Y L     + F +    G+++ 
Sbjct: 3006 QCTKILYSSKVPEDVLPGHFILQVTATDLDTGVNALVTYSLHGPGADEFKLDPYTGELTT 3065

Query: 100  MQCLDYETEDSYRFTVYATDTL-MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLA- 157
            +  LD E +D Y     ATD    +  A V I V +VND  PRF       F  H  +A 
Sbjct: 3066 LMLLDREEKDVYYLVAKATDGGGRSCQADVTIRVEDVNDNAPRF-------FPSHCSVAV 3118

Query: 158  --DLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDSGHISIVD--LSALNTST 211
              + T  + +  V A D D+G   +V+ SL G  +  FSI  +  +  ++  L A+    
Sbjct: 3119 FDNTTVKTPVAVVFARDPDEGINAQVSYSLVGSADGHFSIEATTGVVRLEKPLQAMQQEV 3178

Query: 212  IQLVVVATDTGNP 224
            ++L+V A+D G P
Sbjct: 3179 LELIVRASDQGTP 3191



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 61/199 (30%), Positives = 86/199 (43%), Gaps = 16/199 (8%)

Query: 44   QFSKNEYSVSALEN-LPVNYV--LLTVTTNKPRDLR--VKYWLSNDYGERFSISRQGD-- 96
            QF+   Y  S +EN  P  +V  L T+  +     R    Y    D   +F IS+ GD  
Sbjct: 2901 QFASEVYRGSVIENGEPGEHVATLRTLDADISEQNRQVTCYITEGDPLGQFGISQTGDEW 2960

Query: 97   -ISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIP 155
             I+  + LD E    Y   V A+D     S  V + V+++ND  P+     Y   +P   
Sbjct: 2961 KITTKKTLDREHIAKYLLKVTASDGKFQASTPVEVFVLDINDNSPQCTKILYSSKVPE-- 3018

Query: 156  LADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIND-SGHI-SIVDLSALNTST 211
              D+ PG  I +V A D D G    VT SL GP    F ++  +G + +++ L       
Sbjct: 3019 --DVLPGHFILQVTATDLDTGVNALVTYSLHGPGADEFKLDPYTGELTTLMLLDREEKDV 3076

Query: 212  IQLVVVATDTGNPPRQASV 230
              LV  ATD G    QA V
Sbjct: 3077 YYLVAKATDGGGRSCQADV 3095



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 58/202 (28%), Positives = 102/202 (50%), Gaps = 22/202 (10%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTTNKPRDL---RVKYWLS--NDYGERFSISRQGDIS 98
            Q S+  Y  S  E+ P+N  +L +    P  +   ++ + ++  N+ G     S  G +S
Sbjct: 1132 QMSRPVYYPSVKEDAPMNTSVLQLDAWDPDPVSQGKLTFHITSGNNLGFFVINSLTGLLS 1191

Query: 99   LMQCLDYETEDSYRFTVYATD----TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHI 154
              + LD E +  +   V   D    +L +TS  V + V++VND  P F + ++++ LP  
Sbjct: 1192 TARQLDRENKAEHILEVAVQDNGKPSLQSTSRVV-VRVLDVNDNSPTFSHKRFKIRLPE- 1249

Query: 155  PLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIN-DSGHISI-VDLSA--LN 208
               D +    + ++ A+D D+G   +V+ S+   YE+ F+I+ ++G +S  V+  A   N
Sbjct: 1250 -RQDSSVPRPVYRLVASDRDEGPNGKVSYSIEENYEEAFTIDAETGLVSASVNFPAGEYN 1308

Query: 209  TSTIQLVVVATDTGNPPRQASV 230
              TIQ    A D+G PPR +SV
Sbjct: 1309 ILTIQ----AVDSGQPPRSSSV 1326



 Score = 44.3 bits (103), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 54/184 (29%), Positives = 87/184 (47%), Gaps = 28/184 (15%)

Query: 52   VSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGERFSISRQ-GDISLMQCLDYETEDS 110
            V A+   P+ Y L+  TT +          SN  G  FS+ ++ G +++ + +DYET   
Sbjct: 2709 VKAVAEDPIIYSLVKGTTPE----------SNKDG-VFSLDQETGALTVKKAIDYETTKW 2757

Query: 111  YRFTVYAT----DTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIG 166
            Y+  V A     +T + +  +VNI V +VND  P F    Y+ FL      ++  G+ + 
Sbjct: 2758 YQIDVMANCSHQETGLISLVSVNIQVKDVNDNKPVFEADPYKAFL----TENMPVGTTVI 2813

Query: 167  KVEAADGDKG--DRVTLSLR----GPYEKMFSIN-DSGHISIV-DLSALNTSTIQLVVVA 218
            +V A D D G    VT SL         ++F+IN ++G I+ + +L           VVA
Sbjct: 2814 QVTANDQDTGVNGEVTYSLALEQGNAAAELFAINSENGWITTLRELDCEVQEMYSFYVVA 2873

Query: 219  TDTG 222
            +D G
Sbjct: 2874 SDHG 2877



 Score = 43.9 bits (102), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 43/132 (32%), Positives = 60/132 (45%), Gaps = 16/132 (12%)

Query: 102  CLDYETEDSYRFTVYATDTL---MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLAD 158
              D E +D+Y   V   D         A V IS+ +VND  P FR+  Y     +  + D
Sbjct: 2022 AFDREQQDAYVVAVEVRDDRHPPRVAQAAVKISIEDVNDNPPEFRHLPY-----YTAIQD 2076

Query: 159  LT-PGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDS--GHISI---VDLSALNTSTI 212
             T PG V+ +V A D D G    ++     + M+   D   G IS+    D  ALN  T+
Sbjct: 2077 GTEPGDVLFQVSAIDLDIGANGAITYAFAEDYMYFWIDPYLGDISLKKPFDYRALNKYTL 2136

Query: 213  QLVVVATDTGNP 224
            +  V+A D GNP
Sbjct: 2137 R--VIAQDGGNP 2146



 Score = 42.4 bits (98), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 38/142 (26%), Positives = 65/142 (45%), Gaps = 16/142 (11%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPR---DLRVKYWLSNDYG----ERFSI-SRQGD 96
            F  + Y     EN+PV   ++ VT N      +  V Y L+ + G    E F+I S  G 
Sbjct: 2793 FEADPYKAFLTENMPVGTTVIQVTANDQDTGVNGEVTYSLALEQGNAAAELFAINSENGW 2852

Query: 97   ISLMQCLDYETEDSYRFTVYATD----TLMTTSATVNISVVNVNDWDPRFRYPQYELFLP 152
            I+ ++ LD E ++ Y F V A+D      +++ A V +++ + ND  P+F    Y   + 
Sbjct: 2853 ITTLRELDCEVQEMYSFYVVASDHGRTIQLSSKALVEVTITDENDNAPQFASEVYRGSV- 2911

Query: 153  HIPLADLTPGSVIGKVEAADGD 174
               + +  PG  +  +   D D
Sbjct: 2912 ---IENGEPGEHVATLRTLDAD 2930



 Score = 42.4 bits (98), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 46/167 (27%), Positives = 73/167 (43%), Gaps = 12/167 (7%)

Query: 76   RVKYW-LSNDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVV 133
            R++Y  LS +    F+I S  G IS+        + +Y   V A+D +  T+  V I+  
Sbjct: 2408 RLEYLILSGNEDRHFTINSTSGIISMFNFCRKHLDSAYLLRVAASDGVFRTAVPVYINTT 2467

Query: 134  NVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKM 190
            N N + P FR   YE+ L      +   G+ + ++ A D D G   T+    +     + 
Sbjct: 2468 NANKYSPEFRQHIYEVELAE----NAEIGTKVIELLAVDPDDGPYGTIDYTIINKLASEK 2523

Query: 191  FSINDSGHISIVDLSALNTSTIQLV---VVATDTGNPPRQASVPAIM 234
            FSIN  G I+ +        T +L+   V+A D G      SV  I+
Sbjct: 2524 FSINSRGQIATLQKLDRENPTEKLMPIKVMARDGGGRVAFCSVKTIL 2570



 Score = 40.0 bits (92), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 56/190 (29%), Positives = 88/190 (46%), Gaps = 21/190 (11%)

Query: 52   VSALENLPVNYVLLTVTTNKPRDL----RVKYWLSNDYGERFSIS-RQGDISLMQCLDYE 106
            V   E+LP+  VL  +    P DL     VKY L ++    F +    G +SL + LD+E
Sbjct: 928  VKVPEDLPLGTVLTFLEAFDP-DLGPGGEVKYTLVDNAQGTFGLDPLTGALSLERELDFE 986

Query: 107  TEDSYRFTVYATD----TLMTTSATVNISVVNVND--WDPRFRYPQYELFLPHIPLADLT 160
                Y  +++A+D         S  V ++V++VN+    PRF    Y+  +    L    
Sbjct: 987  KRTWYNLSLWASDGGKPMARGASCHVQVTVLDVNENLHPPRFASFVYQGQVEENSL---- 1042

Query: 161  PGSVIGKVEAADGDKGDR--VTLSLR-GPYEKMFSIN-DSGHI-SIVDLSALNTSTIQLV 215
            PG+++  V A D D G    +   LR G     FSI+ D+G I +++ L    +    L 
Sbjct: 1043 PGTLVMSVTAQDADFGQDGVIQYFLRDGTDLDTFSIDRDTGMIQTMMPLDREFSPHYWLT 1102

Query: 216  VVATDTGNPP 225
            V+A D G+ P
Sbjct: 1103 VLAVDQGSVP 1112



 Score = 39.3 bits (90), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 33/121 (27%), Positives = 57/121 (47%), Gaps = 9/121 (7%)

Query: 95   GDISLMQCLDYETEDSYRFTVYATDT-----LMTTSATVNISVVNVNDWDPRFRYPQYEL 149
            G ++ +  +DYE   S+ F+++  D        +  A V I V +VND  P F    YE+
Sbjct: 1815 GTLTTVMEMDYEHIPSFSFSIHVHDQGSPILFASKPARVTIHVKDVNDSPPVFSEDAYEV 1874

Query: 150  FLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSGHISIVDLSALNT 209
             +    L  + PG  + +V+A D D     ++      + +F    +G IS+VD++ L  
Sbjct: 1875 MV----LLPIHPGMELLQVQATDADSVVTYSIIAGNADDAVFIHPLTGLISVVDVALLGH 1930

Query: 210  S 210
            S
Sbjct: 1931 S 1931


>gi|195329712|ref|XP_002031554.1| GM26060 [Drosophila sechellia]
 gi|194120497|gb|EDW42540.1| GM26060 [Drosophila sechellia]
          Length = 1975

 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 64/194 (32%), Positives = 98/194 (50%), Gaps = 20/194 (10%)

Query: 55   LENLPVNYVLLTVTTNKPRDLRVKYWLS-NDYGERFSISR-QGDISLMQCLDYETEDSYR 112
            +E  PV  VL T+          ++ +S NDY   F+I++  G I  +  LDYE     +
Sbjct: 1014 VEEQPVGTVLATLQATDEDSSIGEFNISDNDY---FAINQTSGMIYTIARLDYEAVKEVK 1070

Query: 113  FTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTP-GSVIGKV 168
            F V  +DT    +T +A V + ++N+ND DP+F    Y     +  + + +P G+V GKV
Sbjct: 1071 FQVTVSDTGVPALTATADVVVDIINLNDNDPKFSQSDY-----YFNVTENSPRGTVAGKV 1125

Query: 169  EAADGDKG--DRVTLSLRGPYEKMFSIND-SGHISIVDLSALNTSTIQ---LVVVATDTG 222
            EA DGD G    +T +L G   K FSI+  +G++ + + S L+   I+   L VVA D  
Sbjct: 1126 EAHDGDVGVFGEITYTLIGENNKYFSIDAYTGNVMVANSSILDREQIKELTLSVVAQDKA 1185

Query: 223  NPPRQASVPAIMHF 236
                Q S  A +H 
Sbjct: 1186 PAAVQKSATATIHI 1199



 Score = 47.4 bits (111), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 43/134 (32%), Positives = 64/134 (47%), Gaps = 23/134 (17%)

Query: 102 CLDYETEDSYRFTVYATDTLMTTSATV---NISVVNVNDWDPRFRYPQYELFLPHIPLAD 158
           CLDYE+E +Y  +  ATD     SA+V    ISV + ND  P    P Y         A 
Sbjct: 626 CLDYESETTYFLSYKATDDNGRGSASVVSLRISVTDANDSPPVCESPLYR--------AS 677

Query: 159 LTPGSVIGK----VEAADGDKGDRVTLSLRGP--YEKMFSIN-DSGHISI-----VDLSA 206
           +  G+V+      V+A D D   R++  +RG    E +F I+ ++G I I     +D++ 
Sbjct: 678 VDEGAVVFDSPLIVKARDADTMSRISYRIRGSEQVESIFDIDRETGQIIIRPNATLDVTN 737

Query: 207 LNTSTIQLVVVATD 220
           LN+  +   V A D
Sbjct: 738 LNSDQLIFAVEAND 751



 Score = 46.6 bits (109), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 64/224 (28%), Positives = 103/224 (45%), Gaps = 41/224 (18%)

Query: 11  ITLVVRAIQYDN----QDRYALATLIVSKAGTSLRELQ-----FSKNEYSVSALEN-LPV 60
           I+LV+RA +  N     D    AT   +KA  ++R++      F+  EYSVS LEN LP 
Sbjct: 318 ISLVIRARELVNGVPSDDPLTSAT---AKATVTIRDVNDSPPVFNHKEYSVSLLENTLPG 374

Query: 61  NYVLLTVT-TNKPRDLRVKYWLS-NDYGERFSIS-------RQGDISLMQ-CLDYETEDS 110
             + L ++ ++    +  K+ L  +D    F +         Q +I +    LDYE  + 
Sbjct: 375 TPLALDMSVSDADVGINSKFALRLDDVSGVFDVEPKLVTGYSQVNIRVANGTLDYENPNQ 434

Query: 111 YRFTVYA----TDT--LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSV 164
            +F V      TDT   ++++AT+ +SV++ ND  P F    Y   +    L    PG  
Sbjct: 435 RKFIVLVVAEETDTNPRLSSTATITVSVLDANDNKPVFEQESYSASVSEAAL----PGQY 490

Query: 165 IGKVEAAD------GDKGDRVTLSLRGPYEKMFSINDSGHISIV 202
           I  + A D      GD G R +LS  G   ++F +N+   + I+
Sbjct: 491 IATITARDVDSGSYGDSGIRYSLS--GTGAELFHVNEQTGVIIL 532



 Score = 41.6 bits (96), Expect = 0.61,   Method: Compositional matrix adjust.
 Identities = 35/122 (28%), Positives = 52/122 (42%), Gaps = 12/122 (9%)

Query: 109 DSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKV 168
           D   F V A D L T    VNI+V +VN+  P F    Y   +      +   G+ + +V
Sbjct: 741 DQLIFAVEANDGLFTAHCGVNITVRDVNNHVPNFEQQSYSAVVEE----NSEIGTSVERV 796

Query: 169 EAADGDKGDRVTLSLR---GPYEKMFSINDSGHISI---VDLSALNTSTIQLVVVATDTG 222
            A D D G    L  R   G ++    +  +G + +   +D    N  T QL + A+D G
Sbjct: 797 HATDLDTGKNAELRYRIQQGSFDDFGIVETTGEVFVSRKLDFDRRN--TYQLQIQASDQG 854

Query: 223 NP 224
            P
Sbjct: 855 TP 856



 Score = 38.9 bits (89), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 37/149 (24%), Positives = 68/149 (45%), Gaps = 13/149 (8%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGERFSI-SRQGDISLM 100
           F +  YS    EN  +   +  V     +  ++  ++Y +     + F I    G++ + 
Sbjct: 774 FEQQSYSAVVEENSEIGTSVERVHATDLDTGKNAELRYRIQQGSFDDFGIVETTGEVFVS 833

Query: 101 QCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL- 156
           + LD++  ++Y+  + A+D     +T +AT+ I+V N ND DP F  P  +    H  + 
Sbjct: 834 RKLDFDRRNTYQLQIQASDQGTPSLTGTATLTINVQNSNDKDPYF-VPATQ----HAEVR 888

Query: 157 ADLTPGSVIGKVEAADGDKGDRVTLSLRG 185
           AD  PG ++  + A D D  +   L   G
Sbjct: 889 ADAPPGQLVYTLIALDPDVANHNALEFAG 917



 Score = 38.1 bits (87), Expect = 6.6,   Method: Compositional matrix adjust.
 Identities = 44/165 (26%), Positives = 71/165 (43%), Gaps = 21/165 (12%)

Query: 83   NDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDT----LMTTSATVNISVVNVNDW 138
            + + E F ISR G +S+ + LD       R  V  TD+    +      + I +++VN  
Sbjct: 935  DQFKEYFKISRNGKVSVNKQLDRNLFAVMRINVLVTDSTAPNVQQGRGLLIIQIIDVNKN 994

Query: 139  DPRFRYPQYELFLPHIPLADLTP---GSVIGKVEAADGDKGDRVTLSLRGPY----EKMF 191
             PRF  P + +  P I L  +     G+V+  ++A D D       S  G +       F
Sbjct: 995  PPRFNAP-WSVEQPQIKLQMVEEQPVGTVLATLQATDED-------SSIGEFNISDNDYF 1046

Query: 192  SIND-SGHI-SIVDLSALNTSTIQLVVVATDTGNPPRQASVPAIM 234
            +IN  SG I +I  L       ++  V  +DTG P   A+   ++
Sbjct: 1047 AINQTSGMIYTIARLDYEAVKEVKFQVTVSDTGVPALTATADVVV 1091


>gi|195571619|ref|XP_002103800.1| GD20623 [Drosophila simulans]
 gi|194199727|gb|EDX13303.1| GD20623 [Drosophila simulans]
          Length = 1975

 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 64/194 (32%), Positives = 98/194 (50%), Gaps = 20/194 (10%)

Query: 55   LENLPVNYVLLTVTTNKPRDLRVKYWLS-NDYGERFSISR-QGDISLMQCLDYETEDSYR 112
            +E  PV  VL T+          ++ +S NDY   F+I++  G I  +  LDYE     +
Sbjct: 1014 VEEQPVGTVLTTLQATDEDSSIGEFNISDNDY---FAINQTSGMIYTIARLDYEAVKEVK 1070

Query: 113  FTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTP-GSVIGKV 168
            F V  +DT    +T +A V + ++N+ND DP+F    Y     +  + + +P G+V GKV
Sbjct: 1071 FQVTVSDTGVPALTATADVVVDIINLNDNDPKFSQSDY-----YFNVTENSPRGTVAGKV 1125

Query: 169  EAADGDKG--DRVTLSLRGPYEKMFSIND-SGHISIVDLSALNTSTIQ---LVVVATDTG 222
            EA DGD G    +T +L G   K FSI+  +G++ + + S L+   I+   L VVA D  
Sbjct: 1126 EAHDGDVGVFGEITYTLIGENNKYFSIDAYTGNVMVANSSILDREQIKELTLSVVAQDKA 1185

Query: 223  NPPRQASVPAIMHF 236
                Q S  A +H 
Sbjct: 1186 PAAVQKSATATIHI 1199



 Score = 47.4 bits (111), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 43/134 (32%), Positives = 64/134 (47%), Gaps = 23/134 (17%)

Query: 102 CLDYETEDSYRFTVYATDTLMTTSATV---NISVVNVNDWDPRFRYPQYELFLPHIPLAD 158
           CLDYE+E +Y  +  ATD     SA+V    ISV + ND  P    P Y         A 
Sbjct: 626 CLDYESETTYFLSYKATDDNGRGSASVVSLRISVTDANDSPPVCESPLYR--------AS 677

Query: 159 LTPGSVIGK----VEAADGDKGDRVTLSLRGP--YEKMFSIN-DSGHISI-----VDLSA 206
           +  G+V+      V+A D D   R++  +RG    E +F I+ ++G I I     +D++ 
Sbjct: 678 VDEGAVVFDSPLIVKARDADTMSRISYRIRGSEQVETIFDIDRETGQIIIRPNATLDVTN 737

Query: 207 LNTSTIQLVVVATD 220
           LN+  +   V A D
Sbjct: 738 LNSDQLIFAVEAND 751



 Score = 46.6 bits (109), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 64/224 (28%), Positives = 103/224 (45%), Gaps = 41/224 (18%)

Query: 11  ITLVVRAIQYDN----QDRYALATLIVSKAGTSLRELQ-----FSKNEYSVSALEN-LPV 60
           I+LV+RA +  N     D    AT   +KA  ++R++      F+  EYSVS LEN LP 
Sbjct: 318 ISLVIRARELVNGVPSDDPLTSAT---AKATVTIRDVNDSPPVFNHKEYSVSLLENTLPG 374

Query: 61  NYVLLTVT-TNKPRDLRVKYWLS-NDYGERFSIS-------RQGDISLMQ-CLDYETEDS 110
             + L ++ ++    +  K+ L  +D    F +         Q +I +    LDYE  + 
Sbjct: 375 TPLALDMSVSDADVGINSKFALRLDDVSGVFDVEPKLVTGYSQVNIRVANGTLDYENPNQ 434

Query: 111 YRFTVYA----TDT--LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSV 164
            +F V      TDT   ++++AT+ +SV++ ND  P F    Y   +    L    PG  
Sbjct: 435 RKFIVLVVAEETDTNPRLSSTATITVSVLDANDNKPVFEQESYSASVSEAAL----PGQY 490

Query: 165 IGKVEAAD------GDKGDRVTLSLRGPYEKMFSINDSGHISIV 202
           I  + A D      GD G R +LS  G   ++F +N+   + I+
Sbjct: 491 IATITARDVDSGSYGDSGIRYSLS--GTGAELFHVNEQTGVIIL 532



 Score = 42.0 bits (97), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 35/122 (28%), Positives = 52/122 (42%), Gaps = 12/122 (9%)

Query: 109 DSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKV 168
           D   F V A D L T    VNI+V +VN+  P F    Y   +      +   G+ + +V
Sbjct: 741 DQLIFAVEANDGLFTAHCGVNITVRDVNNHVPNFEQQSYSAVVEE----NSEIGTSVERV 796

Query: 169 EAADGDKGDRVTLSLR---GPYEKMFSINDSGHISI---VDLSALNTSTIQLVVVATDTG 222
            A D D G    L  R   G ++    +  +G + +   +D    N  T QL + A+D G
Sbjct: 797 HATDLDTGKNAELRYRIQQGSFDDFGIVETTGEVFVSRKLDFDRRN--TYQLQIQASDQG 854

Query: 223 NP 224
            P
Sbjct: 855 TP 856



 Score = 41.2 bits (95), Expect = 0.94,   Method: Compositional matrix adjust.
 Identities = 59/242 (24%), Positives = 90/242 (37%), Gaps = 44/242 (18%)

Query: 28   LATLIVSKAGTSLRELQFSKNEYSVSALEN----LPVNYVLLTVTTNKPRDLRVKYWLSN 83
            L ++ +  A  +  E   + N Y VS  EN    + + ++     +   RD+     L N
Sbjct: 1416 LLSVSIVDANENRPEFPDASNPYKVSINENSGRDVKIGHIQAASRSKHNRDIFYYMLLGN 1475

Query: 84   DYGERFSISRQGDISLMQCLDYETEDSYRFTVYAT-----------------DTLM--TT 124
            + G  +     GDI   + LD E  D Y   + A+                  TL    T
Sbjct: 1476 EDGAFYVDKLTGDIYTNKSLDREETDVYTLYILASIKADLHISEEERASFSIKTLNRDNT 1535

Query: 125  SATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR 184
             A V I+V++VND  P F  P Y   +     A+   G+ I  V A D D+G    +   
Sbjct: 1536 VAKVAITVLDVNDNPPVFEKPIYYAGVN----ANAKMGAAITLVNATDADQGKNAKIEFM 1591

Query: 185  GPYEKM----------------FSINDSGHISIVDLSA-LNTSTIQLVVVATDTGNPPRQ 227
                 +                F+I+  G IS   + A  N    +L +VA +   P R 
Sbjct: 1592 IVASNLYKFGATKSTGSIVPSPFAISQDGRISANTIMAEYNQDRFELEIVARELEQPQRS 1651

Query: 228  AS 229
            AS
Sbjct: 1652 AS 1653



 Score = 38.1 bits (87), Expect = 6.3,   Method: Compositional matrix adjust.
 Identities = 37/149 (24%), Positives = 67/149 (44%), Gaps = 13/149 (8%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGERFSI-SRQGDISLM 100
           F +  YS    EN  +   +  V     +  ++  ++Y +     + F I    G++ + 
Sbjct: 774 FEQQSYSAVVEENSEIGTSVERVHATDLDTGKNAELRYRIQQGSFDDFGIVETTGEVFVS 833

Query: 101 QCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL- 156
           + LD++  ++Y+  + A+D     +T +AT+ I+V N ND DP F  P  +    H  + 
Sbjct: 834 RKLDFDRRNTYQLQIQASDQGTPSLTGTATLTINVQNSNDKDPYF-VPATQ----HAEVR 888

Query: 157 ADLTPGSVIGKVEAADGDKGDRVTLSLRG 185
           AD  PG ++  + A D D      L   G
Sbjct: 889 ADAPPGQLVYTLIALDPDVASHNALEFAG 917


>gi|345784074|ref|XP_856760.2| PREDICTED: protocadherin Fat 4 isoform 2 [Canis lupus familiaris]
          Length = 4980

 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 75/270 (27%), Positives = 121/270 (44%), Gaps = 44/270 (16%)

Query: 2    INEDD-----FLQPITLV---VRAIQYDNQDRYALATLIVSKAGTSLRELQ--------- 44
            +NEDD     FL P+T V    R + Y+ Q  Y L T+     G     ++         
Sbjct: 1880 VNEDDEDGIFFLNPVTGVFNLTRVLDYEAQQYYIL-TVRAEDGGGQFTTIRVYFNVLDVN 1938

Query: 45   -----FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWL-SNDYGERFSISRQG 95
                 FS N YS S +ENLP+   +L        D    ++ + + S D   +F++ + G
Sbjct: 1939 DNPPIFSLNSYSTSLMENLPLGSTVLVFNVTDADDGINSQLAFSIASGDSLSQFTVDKNG 1998

Query: 96   DISLMQCLDYETEDSYRFTVYATD------TLMTTSATVNISVVNVNDWDPRFRYPQYEL 149
             + +++ LD E++  Y   V   D      +  T++A V+I +++VND  P F  P+   
Sbjct: 1999 VLKVLKSLDRESQSFYNLVVQVHDLPQLPASRFTSTAHVSIILLDVNDNPPAFLSPK--- 2055

Query: 150  FLPHIPLADLTP-GSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIND-SGHISIV-DL 204
             L +IP  + TP  +++ K +A D D G    +  +L  P    FSI    G + +  +L
Sbjct: 2056 -LTYIP--ENTPIDTIVFKAQATDPDSGPNSYIEYTLLNPLGNKFSIGTIDGEVRLTGEL 2112

Query: 205  SALNTSTIQLVVVATDTGNPPRQASVPAIM 234
                 S   L VVATD G P   +S   ++
Sbjct: 2113 DREEVSNYTLTVVATDKGQPALSSSTEVVV 2142



 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 56/183 (30%), Positives = 89/183 (48%), Gaps = 16/183 (8%)

Query: 56   ENLPVNYVLLTVTTNKPR---DLRVKYWLSNDYGERFSISR-QGDISLMQCLDYETEDSY 111
            EN P++ ++       P    +  ++Y L N  G +FSI    G++ L   LD E   +Y
Sbjct: 2061 ENTPIDTIVFKAQATDPDSGPNSYIEYTLLNPLGNKFSIGTIDGEVRLTGELDREEVSNY 2120

Query: 112  RFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKV 168
              TV ATD     +++S  V + V+++ND +P F    Y++ +    L     G+ I +V
Sbjct: 2121 TLTVVATDKGQPALSSSTEVVVMVLDINDNNPVFMQALYKVEINENTLT----GTDIIQV 2176

Query: 169  EAADGDKGDRVTLS---LRGPYEKMFSIND-SGHISIVD-LSALNTSTIQLVVVATDTGN 223
             AADGD+G    +    + G   + F I+  +G I++   L    T T  L V ATD G+
Sbjct: 2177 YAADGDEGTNGQVRYGIIDGNANQEFRIDSVTGAITVAKPLDREKTPTYSLTVQATDRGS 2236

Query: 224  PPR 226
             PR
Sbjct: 2237 TPR 2239



 Score = 58.5 bits (140), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 61/192 (31%), Positives = 92/192 (47%), Gaps = 24/192 (12%)

Query: 50   YSVSALENLPVNYVLLTVTTNKPRDLRV----KYWLSNDYGERFSIS-RQGDISLMQCLD 104
            +S    EN P+ Y +  VTT+   D+ +    +Y +  D    F+I+   GDI + + L+
Sbjct: 2777 FSAYVPENSPLGYTVTRVTTSD-EDIDINAISRYSIM-DTSLPFTINPSTGDIVISRPLN 2834

Query: 105  YETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSV 164
             E  D YR  V A D+  T S  V I V +VND  PRF  P Y L  P   L ++  GS 
Sbjct: 2835 REDTDRYRIRVSAHDSGWTVSTDVTIFVTDVNDNAPRFSRPSYYLDCPE--LTEI--GSK 2890

Query: 165  IGKVEAADGDKGD--RVTLSLRGPYEKMFSIN-DSGHI---------SIVDLSALNTSTI 212
            + +V A D D+G   +V   ++   E  F IN  +G I         ++   S +N +  
Sbjct: 2891 VTQVSATDPDEGSNGQVFYFIKSQSE-YFRINATTGEIFNKQVLKYQNVSGFSNVNINRH 2949

Query: 213  QLVVVATDTGNP 224
              +V ++D GNP
Sbjct: 2950 SFIVTSSDRGNP 2961



 Score = 57.8 bits (138), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 47/158 (29%), Positives = 82/158 (51%), Gaps = 13/158 (8%)

Query: 87   ERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDTL---MTTSATVNISVVNVNDWDPRF 142
             +F+I S  G ++L+  LDYE   +Y   + A D+    + ++ T+NI +++ ND  P F
Sbjct: 1256 RQFAIDSTSGQVTLIGKLDYEATPAYSLVIQAVDSGAVPLNSTCTLNIDILDENDNTPSF 1315

Query: 143  RYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTL--SLRGPY-EKMFSIN-DSGH 198
              P+  LF+    L ++  G ++  V A D D GD   L  S+ G      FSI+ ++G 
Sbjct: 1316 --PKSTLFVD--VLENMRIGELVSSVTATDSDSGDNADLHYSITGTNNHGTFSISPNTGS 1371

Query: 199  ISIVDLSALNTSTI-QLVVVATDTGNPPRQASVPAIMH 235
            I +       T ++ +L + A D G PPR +++  ++H
Sbjct: 1372 IFLAKKLDFETQSLYKLNITAKDQGRPPRSSTMSVVIH 1409



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 57/190 (30%), Positives = 95/190 (50%), Gaps = 15/190 (7%)

Query: 56   ENLPVNYVLLTVTTNKPRDLRVKYWL-SNDYGERFSISR-QGDISLMQCLDYETEDSYRF 113
            EN PV  ++ T+T +  R   + Y++ S + G  F I +  G +S+ Q LD+E    Y  
Sbjct: 2578 ENQPVGTLVTTITGSSLRGEPLSYYIASGNLGSTFQIDQLTGQVSISQPLDFEKIQKYVI 2637

Query: 114  TVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEA 170
             + A D     +++   ++++V++VND  P FR    + F+  I L +L+P  ++  V A
Sbjct: 2638 WIEARDGGFPPLSSYEKLDLTVLDVNDNSPVFR---EDPFVSEI-LENLSPRKIL-TVSA 2692

Query: 171  ADGDKGDRVTLS---LRGPYEKMFSINDS-GHI-SIVDLSALNTSTIQLVVVATDTGNPP 225
             D D G    L    + G  E  F+IN + G I SI  L     S   L + ++D G+P 
Sbjct: 2693 MDKDSGPNGQLDYEIVNGNKEHSFTINHATGEIRSIRPLDREKVSQYVLTIKSSDKGSPS 2752

Query: 226  RQASVPAIMH 235
            +  SV  I++
Sbjct: 2753 QSTSVKVIIN 2762



 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 34/101 (33%), Positives = 49/101 (48%), Gaps = 5/101 (4%)

Query: 77   VKYWLSNDYGERFSIS-RQGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNV 135
            V Y + +   + F I    GD+   + LD E    Y   V A D L ++   +NI+V +V
Sbjct: 1775 VTYTIISGADDSFRIDPESGDLIATKRLDRERRSKYSLLVRADDGLQSSDMRINITVSDV 1834

Query: 136  NDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG 176
            ND  P+F  P Y   +P     D TPGS++  + A D D G
Sbjct: 1835 NDHTPKFSRPVYSFDIPE----DTTPGSLVAAILATDDDSG 1871



 Score = 55.8 bits (133), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 74/237 (31%), Positives = 106/237 (44%), Gaps = 22/237 (9%)

Query: 11  ITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNE-YSVSALENLPVNYVLLTVTT 69
           I L + A       +++ A L+V+    +  +  FS+ E Y+VS +EN P    LL +  
Sbjct: 548 IVLNISARDQGVHPKFSYAQLVVTLLDVNDEKPAFSQPEGYAVSVVENAPTGTELLVLGA 607

Query: 70  NKPRDL----RVKYWLSNDYGERFSISR---QGDISLMQCLDYETEDSYRFTVYATD--- 119
              RDL     V++ L     ++ S       G +S +  LD E +  Y   V ATD   
Sbjct: 608 TD-RDLGDNGTVRFSLQEAETDQRSFRLDPVSGRLSTVASLDREEQAFYSLLVLATDLGS 666

Query: 120 TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG--D 177
              ++ A +N+S+++VND  P F   QY     HI   +   GS I  V A D D G   
Sbjct: 667 PPQSSMARINVSLLDVNDNSPVFYPVQY---FAHI-QENEPGGSYITTVSATDPDLGLNG 722

Query: 178 RVTLSLRGPYEKMFSIN-DSGHISI-VDLSALNTSTIQLVVVATDTGN--PPRQASV 230
            V  S+       F +N  SG IS  + L     +  QL +VATD GN   P QA V
Sbjct: 723 TVRYSISAGDRSRFQVNAQSGVISTRMALDREEKTAYQLQIVATDGGNLQSPNQAIV 779



 Score = 54.7 bits (130), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 50/158 (31%), Positives = 83/158 (52%), Gaps = 12/158 (7%)

Query: 76   RVKYWL-SNDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATD---TLMTTSATVNI 130
            +V+Y +   +  + F I S  G I++ + LD E   +Y  TV ATD   T  T + TVNI
Sbjct: 2188 QVRYGIIDGNANQEFRIDSVTGAITVAKPLDREKTPTYSLTVQATDRGSTPRTDTTTVNI 2247

Query: 131  SVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPY 187
             ++++ND+ P F    Y + +P   L  L P +++ +V A D D+G    LS     G  
Sbjct: 2248 VLLDINDFVPMFELSPYSVNVPE-NLGTL-PRTIL-QVVARDDDQGSNSKLSYVLFGGNE 2304

Query: 188  EKMFSINDSGHISIVD-LSALNTSTIQLVVVATDTGNP 224
            +  F+++ SG + ++  L     +   L+V ATD+G+P
Sbjct: 2305 DNAFTLSASGELRVIQSLDRETKAHFVLMVTATDSGSP 2342



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 49/187 (26%), Positives = 95/187 (50%), Gaps = 12/187 (6%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRDLR--VKYWLS-NDYGERFSISR-QGDISLM 100
           FS+  YS    EN+ + Y + +V+ +   DL   + Y ++  D    F+I++  G ++  
Sbjct: 793 FSQAAYSFVVFENVALGYHVGSVSAST-MDLNSNISYLITTGDQKGMFAINQVTGHLTTA 851

Query: 101 QCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLT 160
             +D E +  Y+  V A+   +T    VNI+V ++ND  P F      + +    + +  
Sbjct: 852 SVIDREEQSFYQLKVVASGGTVTGDTVVNITVKDLNDNSPHFLQAVESVNV----VENWQ 907

Query: 161 PGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIND-SGHISIVDLSALNTSTIQLVVV 217
            G  I + +A D D+G    V  SL+   + +F+IN+ +G+IS++    ++  + Q+ ++
Sbjct: 908 AGHSIFQAKAVDPDEGVNGMVLYSLKQNPKNLFAINEKNGNISLLGPLDVHAGSYQIEIL 967

Query: 218 ATDTGNP 224
           A+D G P
Sbjct: 968 ASDMGVP 974



 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 60/224 (26%), Positives = 99/224 (44%), Gaps = 37/224 (16%)

Query: 45   FSKNEYSVSALENL-PVNYVLLTVTT---NKPRDLRVKYWL-SNDYGERFSISRQGDISL 99
            F  + YSV+  ENL  +   +L V     ++  + ++ Y L   +    F++S  G++ +
Sbjct: 2259 FELSPYSVNVPENLGTLPRTILQVVARDDDQGSNSKLSYVLFGGNEDNAFTLSASGELRV 2318

Query: 100  MQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
            +Q LD ET+  +   V ATD+    +T + T+N+ + +VND  P F    Y   +P    
Sbjct: 2319 IQSLDRETKAHFVLMVTATDSGSPALTGTGTINVIIDDVNDNVPTFASKMYFTTIPE--- 2375

Query: 157  ADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSGHISIVDLSALNTSTIQ--- 213
             D   G+ +  V A+D D      + + G     F+IN S    I+  + L+  T +   
Sbjct: 2376 -DAPTGTDVLLVNASDADASTNAVIRIIGG-NSQFTINPSTG-QIITSALLDRETKENYT 2432

Query: 214  LVVVATDTG--------------------NPPRQASVPAIMHFP 237
            LVVV++D G                    NPPR    P + H P
Sbjct: 2433 LVVVSSDAGSPEPLSSSTSVLVTVTDVNDNPPRFQHHPYVTHIP 2476



 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 57/198 (28%), Positives = 87/198 (43%), Gaps = 24/198 (12%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLS-NDYGERFSISRQGDISLM 100
            F +  Y V+  E+ PVN     V     +   +  + Y ++  + G+ F I   G + + 
Sbjct: 996  FDQLSYEVTLSESEPVNSRFFKVQAFDKDSGANGEIAYSIAEGNTGDAFGIFPDGQLYIK 1055

Query: 101  QCLDYETEDSYRFTVYATDTLMTT-SATVNISVV--NVNDWDPRFRYPQYELFLPHIPLA 157
              LD E +D Y   V A+D  +   SATVN++V+  +VND  P F    Y  +      A
Sbjct: 1056 SELDRELQDRYVLLVVASDRAVEPLSATVNVTVILEDVNDNRPLFNSTNYTFYFEEEQRA 1115

Query: 158  DLTPGSVIGKVEAADGDKGD----RVTLSLRGPYEKMFSINDSGHIS---IVDLSAL--- 207
                GS +GKV A D D G     R +  +  P  ++ +I  SG I+     D  +L   
Sbjct: 1116 ----GSFVGKVNAIDKDFGPNGEVRYSFEMVQPDFELHAI--SGEITNTRQFDRESLMRQ 1169

Query: 208  -NTSTIQLVVVATDTGNP 224
              T+     V+A D G P
Sbjct: 1170 RGTAVFSFTVIAVDQGLP 1187



 Score = 47.8 bits (112), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 46/149 (30%), Positives = 70/149 (46%), Gaps = 12/149 (8%)

Query: 95   GDISLMQCLDYETEDSYRFTVYATDTL----MTTSATVNISVVNVNDWDPRFRYPQYELF 150
            G I     LD ET+++Y   V ++D      +++S +V ++V +VND  PRF   Q+  +
Sbjct: 2415 GQIITSALLDRETKENYTLVVVSSDAGSPEPLSSSTSVLVTVTDVNDNPPRF---QHHPY 2471

Query: 151  LPHIPLADLTPGSVIGKVEAADGDKGDRVTL--SLRGPYEKMFSINDSGHISIVDLSALN 208
            + HIP +   PGS +  V   D D G    L  SL G   + F I D    +I+    LN
Sbjct: 2472 VTHIP-SPTPPGSFVFAVTVTDADIGPNSELHYSLSGRNSEKFHI-DPLRGAIMAAGPLN 2529

Query: 209  -TSTIQLVVVATDTGNPPRQASVPAIMHF 236
              S +   V   D G+ P+  S    + F
Sbjct: 2530 GASEVTFSVHVKDGGSFPKTDSTTVTVRF 2558



 Score = 45.8 bits (107), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 47/172 (27%), Positives = 79/172 (45%), Gaps = 17/172 (9%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGERFSIS-RQGDISLM 100
            F  +EY  + LEN P    ++ +     +   +  + Y + +   + F I    G I+  
Sbjct: 3194 FFPDEYFPTVLENAPSGTTVIHLNATDADSGTNAVIAYTVQSSDSDLFVIDPNTGVITTQ 3253

Query: 101  QCLDYETEDSYRFTVYA---TDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLA 157
              LD+ET+ SY  TV A    D    + AT+NI +   N++ PRF    Y     +  ++
Sbjct: 3254 GFLDFETKQSYHLTVKAFNVPDEERCSFATINIQLKGTNEYVPRFVSKLY-----YFEIS 3308

Query: 158  DLTP-GSVIGKVEAAD---GDKGDRVTLSLRGPYEKMFSIN-DSGHISIVDL 204
            +  P G+++G+V A+D   G  G+   L      +K F IN  +G I +  L
Sbjct: 3309 EAAPKGTIVGEVFASDRDLGADGEVHYLIFGNSRKKGFQINKKTGQIYVSGL 3360



 Score = 43.1 bits (100), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 40/142 (28%), Positives = 73/142 (51%), Gaps = 14/142 (9%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLR----VKYWLSNDYGER-FSI-SRQGDI 97
            +FS++  S +  E+  +  ++ TV+  + RD      ++Y +S+   E  F+I S  G +
Sbjct: 3088 EFSQSHMSATIPESHSIGAIVRTVSA-RDRDAAMNGLIRYSISSGNEEGIFAINSSTGIL 3146

Query: 98   SLMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHI 154
            +L + LDYE    +  T+ ATD      T   +V ++V++VND  P F +P  + + P +
Sbjct: 3147 TLAKALDYELCQKHEMTISATDGGWVARTGYCSVTVNVIDVNDNSPVF-FP--DEYFPTV 3203

Query: 155  PLADLTPGSVIGKVEAADGDKG 176
             L +   G+ +  + A D D G
Sbjct: 3204 -LENAPSGTTVIHLNATDADSG 3224



 Score = 38.9 bits (89), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 31/108 (28%), Positives = 55/108 (50%), Gaps = 7/108 (6%)

Query: 89   FSISRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYP 145
            FS++  G +S  + +D E    +  +V   D+    M+++ TV+I+V++ ND   + R  
Sbjct: 3558 FSLNTAGVLSTTREIDREQIADFYLSVITRDSGVPQMSSTGTVHITVIDQNDNPSQSR-- 3615

Query: 146  QYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSI 193
              E+F+ +    +L PG ++G V+  D D  D    SL      +FSI
Sbjct: 3616 TVEIFVNY--YGNLFPGGILGSVKPQDPDVLDTFHCSLTSGVTSLFSI 3661



 Score = 38.5 bits (88), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 61/240 (25%), Positives = 101/240 (42%), Gaps = 25/240 (10%)

Query: 9    QPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVT 68
            Q   L V+A    +++R + AT+ +   GT+    +F    Y     E  P   ++  V 
Sbjct: 3262 QSYHLTVKAFNVPDEERCSFATINIQLKGTNEYVPRFVSKLYYFEISEAAPKGTIVGEVF 3321

Query: 69   TNKPRDL----RVKYWL-SNDYGERFSISRQ-GDISLMQCLDYETEDSYRFTVYATDTLM 122
             +  RDL     V Y +  N   + F I+++ G I +   LD E E+     V A +   
Sbjct: 3322 ASD-RDLGADGEVHYLIFGNSRKKGFQINKKTGQIYVSGLLDREKEERVSLKVLAKNFGS 3380

Query: 123  TTSA-----TVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTP-GSVIGKVEAADGD-- 174
               A     TVN++V++ ND       P + L +  + +++  P G+ +  V A D D  
Sbjct: 3381 IRGADIDEVTVNVTVLDANDP------PIFSLNIYSVQISEGVPTGTHVTFVSAFDSDSV 3434

Query: 175  -KGDRVTLSL-RGPYEKMFSIN-DSGHISI-VDLSALNTSTIQLVVVATDTGNPPRQASV 230
                R +  +  G     FSIN  +G I++  +L         L V+A D+G P    S 
Sbjct: 3435 PSWSRFSYFIGSGNENGAFSINPQTGQITVTAELDRETLPIYNLTVLAVDSGTPSATGSA 3494


>gi|345793207|ref|XP_544179.3| PREDICTED: cadherin-17 [Canis lupus familiaris]
          Length = 831

 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 79/291 (27%), Positives = 130/291 (44%), Gaps = 29/291 (9%)

Query: 14  VVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPR 73
           +V  + Y N    A   LIV+    +    QF++N Y     E++ +   +  VT   P 
Sbjct: 538 LVHGVNY-NSSSSATFKLIVTNVNEAP---QFTQNIYQAKVREDVAIGTKVGNVTAKDPE 593

Query: 74  DLRVKYWLSNDYGERFSISR-QGDISLMQCLDYETEDSYRFTVYATD---TLMTTSATVN 129
           +L + Y L N+      I    G+I  M  +D E E  YR  V AT+   + +++ AT +
Sbjct: 594 NLDISYSLKNNKRGWLKIDPVTGEIFTMAPMDREAESVYRVQVVATEVGGSSLSSVATFH 653

Query: 130 ISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGD----KGDRVTLSLRG 185
           +++ +VND  PR       LFL H PL    PGSVI   EA D D    +G R T SL  
Sbjct: 654 LALSDVNDNPPRLATDHPHLFLCH-PLQ--APGSVI--FEATDDDQQFFRGPRFTFSLGS 708

Query: 186 PY----EKMFSINDSGHISIVDLSALNTSTIQLVVVATDTGNPPRQASVPAIMHFPEAIV 241
                  ++  IN S        +        + +  +D G P  + +V   + F + + 
Sbjct: 709 KVLENDWEVKRINGSHAKLSTKHTNFEERVYSVPIHISDGGEPELKGTVSLPVTFCKCV- 767

Query: 242 QQASSKLNSGTSS---TVLIILGVVL---IVLGFVIILLILYIHKNKHTKN 286
            + S    +G  S   TV + +G++L   +V+G ++ ++ + I KN+   N
Sbjct: 768 -EGSCFRPAGHQSGMPTVGMAVGILLTTFLVIGIILAVVFIRIKKNEGKDN 817


>gi|24580686|ref|NP_523446.2| dachsous [Drosophila melanogaster]
 gi|22945533|gb|AAF51468.3| dachsous [Drosophila melanogaster]
          Length = 3556

 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 66/214 (30%), Positives = 96/214 (44%), Gaps = 27/214 (12%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWL-------------SNDYGER 88
            F K+EYSV+  E+  +N  ++ V     +   + R+ Y +             S+D  + 
Sbjct: 1036 FEKDEYSVNVSESRSINAQIIQVNASDLDTGNNARITYRIVDAGVDNVTNSISSSDVSQH 1095

Query: 89   FSI-SRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRY 144
            F I    G I L   LD ET D Y+ TV ATD           V + V++ ND DP+F+ 
Sbjct: 1096 FGIFPNSGWIYLRAPLDRETRDRYQLTVLATDNGTPAAHAKTRVIVRVLDANDNDPKFQK 1155

Query: 145  PQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRG-PYEKMFSIND-SGHISIV 202
             +YE  +      +L  GSV+G V A+D D G+   +     P    F ++  +G IS  
Sbjct: 1156 SKYEFRIEE----NLRRGSVVGVVTASDLDLGENAAIRYSLLPINSSFQVHPVTGEISTR 1211

Query: 203  D-LSALNTSTIQLVVVATDTGNPPRQASVPAIMH 235
            + L         LVV A D G P R A VP  +H
Sbjct: 1212 EPLDRELRELYDLVVEARDQGTPVRSARVPVRIH 1245



 Score = 67.8 bits (164), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 67/211 (31%), Positives = 104/211 (49%), Gaps = 17/211 (8%)

Query: 29  ATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGER 88
           AT++V+    +  E  F ++ Y+VS  EN PV   +L V+ + P D  V   ++   GE 
Sbjct: 595 ATVLVTIHDVNDNEPIFDQSFYNVSVAENEPVGRCILKVSASDP-DCGVNAMVNYTIGEG 653

Query: 89  FS-------ISRQGDISLMQCLDYETEDSYRFTVYATDT-LMTTSATVNISVVNVNDWDP 140
           F         S  G+I +   LD+E   SY F V ATD   ++T+A + + + +VND  P
Sbjct: 654 FKHLTEFEVRSASGEICIAGELDFERRSSYEFPVLATDRGGLSTTAMIKMQLTDVNDNRP 713

Query: 141 RFRYPQYELFLPHIPLADLTPGSV-IGKVEAADGDKGDRVTLSLR---GPYEKMFSINDS 196
            F   +Y++ L   P A     S  I  V A D D G+   +S R   G    +F I+ S
Sbjct: 714 VFYPREYKVSLRESPKASSQASSTPIVAVVATDPDYGNFGQVSYRIVAGNEAGIFRIDRS 773

Query: 197 -GHISIV--DLSALNTSTIQLV-VVATDTGN 223
            G I +V  D+ ++ T  + ++ + ATD GN
Sbjct: 774 TGEIFVVRPDMLSVRTQPMHMLNISATDGGN 804



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 62/201 (30%), Positives = 104/201 (51%), Gaps = 21/201 (10%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGERFSISRQ-GDISL 99
            +F  ++Y+ S  E+ P+   ++ ++    +   + R+ Y L+N+   +F+I  Q G I+ 
Sbjct: 1951 RFKLSKYTGSVQEDAPLGTSVVQISAVDADLGVNARLVYSLANETQWQFAIDGQSGLITT 2010

Query: 100  MQCLDYETEDSYRFTVYATD----TLMTTSATVNISVVNVNDWDPRF-RYPQYELFLPHI 154
            +  LD E + SY F V ATD     + + +  V I+V+++ND  P F RYP    ++  +
Sbjct: 2011 VGKLDRELQASYNFMVLATDGGRYEVRSATVPVQINVLDINDNRPIFERYP----YIGQV 2066

Query: 155  PLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKM---FSINDS-GHISIVD-LSAL 207
            P A + PG  + KV+A D D G    +  SL      +   F IN S G +S    L++ 
Sbjct: 2067 P-ALIQPGQTLLKVQALDADLGANAEIVYSLNAENSAVSAKFRINPSTGALSASQSLASE 2125

Query: 208  NTSTIQLVVVATDTGNPPRQA 228
            +   + L VVA D GNPP+ +
Sbjct: 2126 SGKLLHLEVVARDKGNPPQSS 2146



 Score = 47.0 bits (110), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 57/209 (27%), Positives = 88/209 (42%), Gaps = 39/209 (18%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGERFSISRQ--------- 94
            +F K++Y     ENL    V+  VT +   DL        D GE  +I            
Sbjct: 1152 KFQKSKYEFRIEENLRRGSVVGVVTAS---DL--------DLGENAAIRYSLLPINSSFQ 1200

Query: 95   -----GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQ 146
                 G+IS  + LD E  + Y   V A D    + +    V I V +VND  P    PQ
Sbjct: 1201 VHPVTGEISTREPLDRELRELYDLVVEARDQGTPVRSARVPVRIHVSDVNDNAPEIADPQ 1260

Query: 147  YELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRG---PYEKMFSINDSGHI- 199
             ++        +  PG+ + +V A D D G   +++   ++G       +FSI+ +  + 
Sbjct: 1261 EDVVSVR---EEQPPGTEVVRVRAVDRDHGQNASITYSIVKGRDSDGHGLFSIDPTSGVI 1317

Query: 200  -SIVDLSALNTSTIQLVVVATDTGNPPRQ 227
             + V L     S  +L V A+D GNPPR+
Sbjct: 1318 RTRVVLDHEERSIYRLGVAASDGGNPPRE 1346



 Score = 45.4 bits (106), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 59/207 (28%), Positives = 94/207 (45%), Gaps = 27/207 (13%)

Query: 45  FSKNEYSVSALENLPVNYVLLTV---TTNKPRDLRVKYWLS---NDYGERFSIS-RQGDI 97
           F+++ Y  +  EN  V   +L V    T+   +  V+Y ++   +D  + F I  R G I
Sbjct: 286 FNQSRYFATVPENATVGTSVLQVYASDTDADENGLVEYAINRRQSDKEQMFRIDPRTGAI 345

Query: 98  SLMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFL--- 151
            + + LD+ET++ +   V A D     + T+A V+I V +VND  P        +FL   
Sbjct: 346 YINKALDFETKELHELVVVAKDHGEQPLETTAFVSIRVTDVNDNQPTINV----IFLSDD 401

Query: 152 --PHIPLADLTPGSVIGKVEAADGDKGDR-----VTLSLRGPYEKMFSINDSGHISIVDL 204
             P I  +   PG  + ++   D D         VTL+    +  + + ++S ++ IV L
Sbjct: 402 ASPKISES-AQPGEFVARISVHDPDSKTEYANVNVTLNGGDGHFALTTRDNSIYLVIVHL 460

Query: 205 SALN--TSTIQLVVVATDTGNPPRQAS 229
                  S   L VVATD G PP  AS
Sbjct: 461 PLDREIVSNYTLSVVATDKGTPPLHAS 487



 Score = 42.7 bits (99), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 40/122 (32%), Positives = 59/122 (48%), Gaps = 16/122 (13%)

Query: 74   DLRVKYWL---SNDYGER-FSISRQ-GDISLMQCLDYETEDSYRFTVYATDTL-----MT 123
            DLRV Y L   + D  E  F I R  G++ + + LD E +  +R  + A DT       +
Sbjct: 1407 DLRVTYTLNPLTKDLIEAAFDIDRHSGNLVVARLLDREVQSEFRLEIRALDTTASNNPQS 1466

Query: 124  TSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTP-GSVIGKVEAADGDKGDRVTLS 182
            ++ TV I V +VND  P   +PQ  + L    +++ TP G++I    A D D G    L 
Sbjct: 1467 SAITVKIEVADVNDNAP--EWPQDPIDL---QVSEATPVGTIIHNFTATDADTGTNGDLQ 1521

Query: 183  LR 184
             R
Sbjct: 1522 YR 1523



 Score = 42.7 bits (99), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 47/160 (29%), Positives = 69/160 (43%), Gaps = 29/160 (18%)

Query: 95   GDISLMQCLDYETEDSYRFTVYATDT------LMTTSATVNISVVNVNDWDPRFRYPQ-- 146
            G +SL   LD+E    Y   V A D        + TS TV + +++ ND  P F  P   
Sbjct: 1549 GALSLQAPLDFEAVQEYLLIVQALDQSSNVTERLQTSVTVRLRILDANDHAPHFVSPNSS 1608

Query: 147  ----YELFLPHIPLADLTP-GSVIGKVEAADGDKGDRVTLSLR---GPYEKMFSIN-DSG 197
                  LF     ++D T  G V+  + A D D GD   L+     G  E  F IN  +G
Sbjct: 1609 GGKTASLF-----ISDATRIGEVVAHIVAVDEDSGDNGQLTYEITGGNGEGRFRINSQTG 1663

Query: 198  HISIVDLSALNTSTIQ------LVVVATDTGNP-PRQASV 230
             I +V      T  ++      L++ A D G P P+++S+
Sbjct: 1664 IIELVKSLPPATEDVEKGGRFNLIIGAKDHGQPEPKKSSL 1703



 Score = 40.8 bits (94), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 63/229 (27%), Positives = 104/229 (45%), Gaps = 17/229 (7%)

Query: 9    QPITLV-VRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTV 67
            QP+ ++ + A    N    A A + +S      R   F K  Y+    E++P   V+ +V
Sbjct: 790  QPMHMLNISATDGGNLRSNADAVVFLSIIDAMQRPPIFEKARYNYYVKEDIPRGTVVGSV 849

Query: 68   ---TTNKPRDLRVKYWL-SNDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYAT--DT 120
               + +      V+Y + S D    FSI +  G+I + + LD+E +      + AT  + 
Sbjct: 850  IAASGDVAHRSPVRYSIYSGDPDGYFSIETNSGNIRIAKPLDHEAKSQVLLNIQATLGEP 909

Query: 121  LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGD--R 178
             +     VNI V +VND  P F      + +P    A+L  G+ +    A D D G   +
Sbjct: 910  PVYGHTQVNIEVEDVNDNAPEFEASMVRISVPES--AEL--GAPLYAAHAHDKDSGSSGQ 965

Query: 179  VTLSL-RGPYEKMFSIN-DSGHISIVD-LSALNTSTIQLVVVATDTGNP 224
            VT SL +   + +F+I+  SGH+ +   L   ++    L+V ATD G P
Sbjct: 966  VTYSLVKESGKGLFAIDARSGHLILSQHLDYESSQRHTLIVTATDGGVP 1014



 Score = 40.8 bits (94), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 51/186 (27%), Positives = 81/186 (43%), Gaps = 26/186 (13%)

Query: 76   RVKYWLSNDYGER-FSI-SRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNI 130
            +V Y L  + G+  F+I +R G + L Q LDYE+   +   V ATD     ++T+ T+ +
Sbjct: 965  QVTYSLVKESGKGLFAIDARSGHLILSQHLDYESSQRHTLIVTATDGGVPSLSTNLTILV 1024

Query: 131  SVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR------ 184
             V +VND  P F   +Y + +        +  + I +V A+D D G+   ++ R      
Sbjct: 1025 DVQDVNDNPPVFEKDEYSVNVSE----SRSINAQIIQVNASDLDTGNNARITYRIVDAGV 1080

Query: 185  ---------GPYEKMFSI-NDSGHISI-VDLSALNTSTIQLVVVATDTGNPPRQASVPAI 233
                         + F I  +SG I +   L        QL V+ATD G P   A    I
Sbjct: 1081 DNVTNSISSSDVSQHFGIFPNSGWIYLRAPLDRETRDRYQLTVLATDNGTPAAHAKTRVI 1140

Query: 234  MHFPEA 239
            +   +A
Sbjct: 1141 VRVLDA 1146



 Score = 40.0 bits (92), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 31/108 (28%), Positives = 46/108 (42%), Gaps = 6/108 (5%)

Query: 92   SRQGDISLMQCLDYETEDSYRFTVYATDTL-MTTSATVNISVVNVNDWDPRFRYPQYELF 150
            S  G ++     DYE    Y   + A+D      S  V + + + +++ P+F    Y   
Sbjct: 2918 SESGLVTSAFVFDYEQRQRYDMELLASDMGGKKASVAVRVEIESRDEFTPQFTERTYRFV 2977

Query: 151  LPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDS 196
            LP      L  G V+G+V A D D G   RV   L  P+   F +N S
Sbjct: 2978 LP--AAVALPQGYVVGQVTATDSDSGPDGRVVYQLSAPHSH-FKVNRS 3022



 Score = 39.3 bits (90), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 62/220 (28%), Positives = 89/220 (40%), Gaps = 47/220 (21%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTT-------NKPRDLRVKYWLSNDYGERFSISRQ-G 95
            +F +  Y  + LEN+P    +L VT        N      +   ++ND    F +  Q G
Sbjct: 1718 RFLQAVYRATILENVPSGSFVLQVTAKSLHGAENANLSYEIPAGVANDL---FHVDWQRG 1774

Query: 96   DISLMQCLDYETEDSYRFTVY-------------------ATDTLMTTS-------ATVN 129
             I+     D E++ SY   VY                   ++D++  TS       AT+ 
Sbjct: 1775 IITTRGQFDRESQASYVLPVYVRDANRQSTLSSSAVRKQRSSDSIGDTSNGQHFDVATIY 1834

Query: 130  ISVVNVNDWDPRFRYPQ-YELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR---G 185
            I+V +VND  P FR    Y L +P     +  PG VI  V A+D D+G    L      G
Sbjct: 1835 ITVGDVNDNSPEFRPGSCYGLSVPE----NSEPG-VIHTVVASDLDEGPNADLIYSITGG 1889

Query: 186  PYEKMFSIN-DSGHISIVDLSALNTSTIQLVVVATDTGNP 224
                 FSI+  SG +S   L     S   L + A+D G P
Sbjct: 1890 NLGNKFSIDSSSGELSARPLDREQHSRYTLQIQASDRGQP 1929



 Score = 38.1 bits (87), Expect = 8.2,   Method: Compositional matrix adjust.
 Identities = 41/140 (29%), Positives = 63/140 (45%), Gaps = 14/140 (10%)

Query: 96  DISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLP 152
           D+ +   LD ET   Y   + A D     +    TVNI++ +VND  P F   +Y   +P
Sbjct: 237 DLQISGFLDRETTPGYSLLIEALDGGTPPLRGFMTVNITIQDVNDNQPIFNQSRYFATVP 296

Query: 153 HIPLADLTPGSVIGKVEAADGDKGDRVTLSL-----RGPYEKMFSIN-DSGHISIVDLSA 206
                + T G+ + +V A+D D  +   +       +   E+MF I+  +G I I     
Sbjct: 297 E----NATVGTSVLQVYASDTDADENGLVEYAINRRQSDKEQMFRIDPRTGAIYINKALD 352

Query: 207 LNTSTI-QLVVVATDTGNPP 225
             T  + +LVVVA D G  P
Sbjct: 353 FETKELHELVVVAKDHGEQP 372


>gi|25090185|sp|Q24292.3|DS_DROME RecName: Full=Protein dachsous; AltName: Full=Adherin; Flags:
            Precursor
          Length = 3503

 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 66/214 (30%), Positives = 96/214 (44%), Gaps = 27/214 (12%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWL-------------SNDYGER 88
            F K+EYSV+  E+  +N  ++ V     +   + R+ Y +             S+D  + 
Sbjct: 983  FEKDEYSVNVSESRSINAQIIQVNASDLDTGNNARITYRIVDAGVDNVTNSISSSDVSQH 1042

Query: 89   FSI-SRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRY 144
            F I    G I L   LD ET D Y+ TV ATD           V + V++ ND DP+F+ 
Sbjct: 1043 FGIFPNSGWIYLRAPLDRETRDRYQLTVLATDNGTPAAHAKTRVIVRVLDANDNDPKFQK 1102

Query: 145  PQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRG-PYEKMFSIND-SGHISIV 202
             +YE  +      +L  GSV+G V A+D D G+   +     P    F ++  +G IS  
Sbjct: 1103 SKYEFRIEE----NLRRGSVVGVVTASDLDLGENAAIRYSLLPINSSFQVHPVTGEISTR 1158

Query: 203  D-LSALNTSTIQLVVVATDTGNPPRQASVPAIMH 235
            + L         LVV A D G P R A VP  +H
Sbjct: 1159 EPLDRELRELYDLVVEARDQGTPVRSARVPVRIH 1192



 Score = 67.8 bits (164), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 67/211 (31%), Positives = 104/211 (49%), Gaps = 17/211 (8%)

Query: 29  ATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGER 88
           AT++V+    +  E  F ++ Y+VS  EN PV   +L V+ + P D  V   ++   GE 
Sbjct: 542 ATVLVTIHDVNDNEPIFDQSFYNVSVAENEPVGRCILKVSASDP-DCGVNAMVNYTIGEG 600

Query: 89  FS-------ISRQGDISLMQCLDYETEDSYRFTVYATDT-LMTTSATVNISVVNVNDWDP 140
           F         S  G+I +   LD+E   SY F V ATD   ++T+A + + + +VND  P
Sbjct: 601 FKHLTEFEVRSASGEICIAGELDFERRSSYEFPVLATDRGGLSTTAMIKMQLTDVNDNRP 660

Query: 141 RFRYPQYELFLPHIPLADLTPGSV-IGKVEAADGDKGDRVTLSLR---GPYEKMFSINDS 196
            F   +Y++ L   P A     S  I  V A D D G+   +S R   G    +F I+ S
Sbjct: 661 VFYPREYKVSLRESPKASSQASSTPIVAVVATDPDYGNFGQVSYRIVAGNEAGIFRIDRS 720

Query: 197 -GHISIV--DLSALNTSTIQLV-VVATDTGN 223
            G I +V  D+ ++ T  + ++ + ATD GN
Sbjct: 721 TGEIFVVRPDMLSVRTQPMHMLNISATDGGN 751



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 62/201 (30%), Positives = 104/201 (51%), Gaps = 21/201 (10%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGERFSISRQ-GDISL 99
            +F  ++Y+ S  E+ P+   ++ ++    +   + R+ Y L+N+   +F+I  Q G I+ 
Sbjct: 1898 RFKLSKYTGSVQEDAPLGTSVVQISAVDADLGVNARLVYSLANETQWQFAIDGQSGLITT 1957

Query: 100  MQCLDYETEDSYRFTVYATD----TLMTTSATVNISVVNVNDWDPRF-RYPQYELFLPHI 154
            +  LD E + SY F V ATD     + + +  V I+V+++ND  P F RYP    ++  +
Sbjct: 1958 VGKLDRELQASYNFMVLATDGGRYEVRSATVPVQINVLDINDNRPIFERYP----YIGQV 2013

Query: 155  PLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKM---FSINDS-GHISIVD-LSAL 207
            P A + PG  + KV+A D D G    +  SL      +   F IN S G +S    L++ 
Sbjct: 2014 P-ALIQPGQTLLKVQALDADLGANAEIVYSLNAENSAVSAKFRINPSTGALSASQSLASE 2072

Query: 208  NTSTIQLVVVATDTGNPPRQA 228
            +   + L VVA D GNPP+ +
Sbjct: 2073 SGKLLHLEVVARDKGNPPQSS 2093



 Score = 47.0 bits (110), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 57/209 (27%), Positives = 88/209 (42%), Gaps = 39/209 (18%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGERFSISRQ--------- 94
            +F K++Y     ENL    V+  VT +   DL        D GE  +I            
Sbjct: 1099 KFQKSKYEFRIEENLRRGSVVGVVTAS---DL--------DLGENAAIRYSLLPINSSFQ 1147

Query: 95   -----GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQ 146
                 G+IS  + LD E  + Y   V A D    + +    V I V +VND  P    PQ
Sbjct: 1148 VHPVTGEISTREPLDRELRELYDLVVEARDQGTPVRSARVPVRIHVSDVNDNAPEIADPQ 1207

Query: 147  YELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRG---PYEKMFSINDSGHI- 199
             ++        +  PG+ + +V A D D G   +++   ++G       +FSI+ +  + 
Sbjct: 1208 EDVVSVR---EEQPPGTEVVRVRAVDRDHGQNASITYSIVKGRDSDGHGLFSIDPTSGVI 1264

Query: 200  -SIVDLSALNTSTIQLVVVATDTGNPPRQ 227
             + V L     S  +L V A+D GNPPR+
Sbjct: 1265 RTRVVLDHEERSIYRLGVAASDGGNPPRE 1293



 Score = 45.1 bits (105), Expect = 0.052,   Method: Compositional matrix adjust.
 Identities = 59/207 (28%), Positives = 94/207 (45%), Gaps = 27/207 (13%)

Query: 45  FSKNEYSVSALENLPVNYVLLTV---TTNKPRDLRVKYWLS---NDYGERFSIS-RQGDI 97
           F+++ Y  +  EN  V   +L V    T+   +  V+Y ++   +D  + F I  R G I
Sbjct: 233 FNQSRYFATVPENATVGTSVLQVYASDTDADENGLVEYAINRRQSDKEQMFRIDPRTGAI 292

Query: 98  SLMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFL--- 151
            + + LD+ET++ +   V A D     + T+A V+I V +VND  P        +FL   
Sbjct: 293 YINKALDFETKELHELVVVAKDHGEQPLETTAFVSIRVTDVNDNQPTINV----IFLSDD 348

Query: 152 --PHIPLADLTPGSVIGKVEAADGDKGDR-----VTLSLRGPYEKMFSINDSGHISIVDL 204
             P I  +   PG  + ++   D D         VTL+    +  + + ++S ++ IV L
Sbjct: 349 ASPKISES-AQPGEFVARISVHDPDSKTEYANVNVTLNGGDGHFALTTRDNSIYLVIVHL 407

Query: 205 SALN--TSTIQLVVVATDTGNPPRQAS 229
                  S   L VVATD G PP  AS
Sbjct: 408 PLDREIVSNYTLSVVATDKGTPPLHAS 434



 Score = 42.7 bits (99), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 40/122 (32%), Positives = 59/122 (48%), Gaps = 16/122 (13%)

Query: 74   DLRVKYWL---SNDYGER-FSISRQ-GDISLMQCLDYETEDSYRFTVYATDTL-----MT 123
            DLRV Y L   + D  E  F I R  G++ + + LD E +  +R  + A DT       +
Sbjct: 1354 DLRVTYTLNPLTKDLIEAAFDIDRHSGNLVVARLLDREVQSEFRLEIRALDTTASNNPQS 1413

Query: 124  TSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTP-GSVIGKVEAADGDKGDRVTLS 182
            ++ TV I V +VND  P   +PQ  + L    +++ TP G++I    A D D G    L 
Sbjct: 1414 SAITVKIEVADVNDNAP--EWPQDPIDL---QVSEATPVGTIIHNFTATDADTGTNGDLQ 1468

Query: 183  LR 184
             R
Sbjct: 1469 YR 1470



 Score = 42.4 bits (98), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 47/160 (29%), Positives = 69/160 (43%), Gaps = 29/160 (18%)

Query: 95   GDISLMQCLDYETEDSYRFTVYATDT------LMTTSATVNISVVNVNDWDPRFRYPQ-- 146
            G +SL   LD+E    Y   V A D        + TS TV + +++ ND  P F  P   
Sbjct: 1496 GALSLQAPLDFEAVQEYLLIVQALDQSSNVTERLQTSVTVRLRILDANDHAPHFVSPNSS 1555

Query: 147  ----YELFLPHIPLADLTP-GSVIGKVEAADGDKGDRVTLSLR---GPYEKMFSIN-DSG 197
                  LF     ++D T  G V+  + A D D GD   L+     G  E  F IN  +G
Sbjct: 1556 GGKTASLF-----ISDATRIGEVVAHIVAVDEDSGDNGQLTYEITGGNGEGRFRINSQTG 1610

Query: 198  HISIVDLSALNTSTIQ------LVVVATDTGNP-PRQASV 230
             I +V      T  ++      L++ A D G P P+++S+
Sbjct: 1611 IIELVKSLPPATEDVEKGGRFNLIIGAKDHGQPEPKKSSL 1650



 Score = 40.8 bits (94), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 63/229 (27%), Positives = 104/229 (45%), Gaps = 17/229 (7%)

Query: 9   QPITLV-VRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTV 67
           QP+ ++ + A    N    A A + +S      R   F K  Y+    E++P   V+ +V
Sbjct: 737 QPMHMLNISATDGGNLRSNADAVVFLSIIDAMQRPPIFEKARYNYYVKEDIPRGTVVGSV 796

Query: 68  ---TTNKPRDLRVKYWL-SNDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYAT--DT 120
              + +      V+Y + S D    FSI +  G+I + + LD+E +      + AT  + 
Sbjct: 797 IAASGDVAHRSPVRYSIYSGDPDGYFSIETNSGNIRIAKPLDHEAKSQVLLNIQATLGEP 856

Query: 121 LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGD--R 178
            +     VNI V +VND  P F      + +P    A+L  G+ +    A D D G   +
Sbjct: 857 PVYGHTQVNIEVEDVNDNAPEFEASMVRISVPE--SAEL--GAPLYAAHAHDKDSGSSGQ 912

Query: 179 VTLSL-RGPYEKMFSIN-DSGHISIVD-LSALNTSTIQLVVVATDTGNP 224
           VT SL +   + +F+I+  SGH+ +   L   ++    L+V ATD G P
Sbjct: 913 VTYSLVKESGKGLFAIDARSGHLILSQHLDYESSQRHTLIVTATDGGVP 961



 Score = 40.8 bits (94), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 51/186 (27%), Positives = 81/186 (43%), Gaps = 26/186 (13%)

Query: 76   RVKYWLSNDYGER-FSI-SRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNI 130
            +V Y L  + G+  F+I +R G + L Q LDYE+   +   V ATD     ++T+ T+ +
Sbjct: 912  QVTYSLVKESGKGLFAIDARSGHLILSQHLDYESSQRHTLIVTATDGGVPSLSTNLTILV 971

Query: 131  SVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR------ 184
             V +VND  P F   +Y + +        +  + I +V A+D D G+   ++ R      
Sbjct: 972  DVQDVNDNPPVFEKDEYSVNVSE----SRSINAQIIQVNASDLDTGNNARITYRIVDAGV 1027

Query: 185  ---------GPYEKMFSI-NDSGHISI-VDLSALNTSTIQLVVVATDTGNPPRQASVPAI 233
                         + F I  +SG I +   L        QL V+ATD G P   A    I
Sbjct: 1028 DNVTNSISSSDVSQHFGIFPNSGWIYLRAPLDRETRDRYQLTVLATDNGTPAAHAKTRVI 1087

Query: 234  MHFPEA 239
            +   +A
Sbjct: 1088 VRVLDA 1093



 Score = 40.0 bits (92), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 31/108 (28%), Positives = 46/108 (42%), Gaps = 6/108 (5%)

Query: 92   SRQGDISLMQCLDYETEDSYRFTVYATDTL-MTTSATVNISVVNVNDWDPRFRYPQYELF 150
            S  G ++     DYE    Y   + A+D      S  V + + + +++ P+F    Y   
Sbjct: 2865 SESGLVTSAFVFDYEQRQRYDMELLASDMGGKKASVAVRVEIESRDEFTPQFTERTYRFV 2924

Query: 151  LPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDS 196
            LP      L  G V+G+V A D D G   RV   L  P+   F +N S
Sbjct: 2925 LP--AAVALPQGYVVGQVTATDSDSGPDGRVVYQLSAPHSH-FKVNRS 2969



 Score = 39.3 bits (90), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 62/220 (28%), Positives = 89/220 (40%), Gaps = 47/220 (21%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTT-------NKPRDLRVKYWLSNDYGERFSISRQ-G 95
            +F +  Y  + LEN+P    +L VT        N      +   ++ND    F +  Q G
Sbjct: 1665 RFLQAVYRATILENVPSGSFVLQVTAKSLHGAENANLSYEIPAGVANDL---FHVDWQRG 1721

Query: 96   DISLMQCLDYETEDSYRFTVY-------------------ATDTLMTTS-------ATVN 129
             I+     D E++ SY   VY                   ++D++  TS       AT+ 
Sbjct: 1722 IITTRGQFDRESQASYVLPVYVRDANRQSTLSSSAVRKQRSSDSIGDTSNGQHFDVATIY 1781

Query: 130  ISVVNVNDWDPRFRYPQ-YELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR---G 185
            I+V +VND  P FR    Y L +P     +  PG VI  V A+D D+G    L      G
Sbjct: 1782 ITVGDVNDNSPEFRPGSCYGLSVPE----NSEPG-VIHTVVASDLDEGPNADLIYSITGG 1836

Query: 186  PYEKMFSIN-DSGHISIVDLSALNTSTIQLVVVATDTGNP 224
                 FSI+  SG +S   L     S   L + A+D G P
Sbjct: 1837 NLGNKFSIDSSSGELSARPLDREQHSRYTLQIQASDRGQP 1876



 Score = 37.7 bits (86), Expect = 8.3,   Method: Compositional matrix adjust.
 Identities = 41/140 (29%), Positives = 63/140 (45%), Gaps = 14/140 (10%)

Query: 96  DISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLP 152
           D+ +   LD ET   Y   + A D     +    TVNI++ +VND  P F   +Y   +P
Sbjct: 184 DLQISGFLDRETTPGYSLLIEALDGGTPPLRGFMTVNITIQDVNDNQPIFNQSRYFATVP 243

Query: 153 HIPLADLTPGSVIGKVEAADGDKGDRVTLSL-----RGPYEKMFSIN-DSGHISIVDLSA 206
                + T G+ + +V A+D D  +   +       +   E+MF I+  +G I I     
Sbjct: 244 E----NATVGTSVLQVYASDTDADENGLVEYAINRRQSDKEQMFRIDPRTGAIYINKALD 299

Query: 207 LNTSTI-QLVVVATDTGNPP 225
             T  + +LVVVA D G  P
Sbjct: 300 FETKELHELVVVAKDHGEQP 319


>gi|348511876|ref|XP_003443469.1| PREDICTED: protocadherin Fat 4 [Oreochromis niloticus]
          Length = 4971

 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 74/265 (27%), Positives = 110/265 (41%), Gaps = 37/265 (13%)

Query: 1    DINEDDFLQPITL---VVRAIQYDNQDRYALATLIVSKAGTSLRELQ------------- 44
            D +E   L P+T    V R + Y+ Q  Y L T      G     ++             
Sbjct: 1860 DEDETFLLNPVTGFFNVTRPLDYETQQYYIL-TAKAQDGGGQASTVRVYFNVLDVNDNAP 1918

Query: 45   -FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWL----SNDYGERFSISRQGDISL 99
             F+   YS S  E+LP    ++TV      D +    L    S D    F I++ G +  
Sbjct: 1919 IFNTTTYSTSVSESLPPGSSIITVGATDADDGQNAQLLYKIASGDPQGHFVITKDGVLQT 1978

Query: 100  MQCLDYETEDSYRFTVYATD------TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
             + LD ET+  Y   V   D      T  T++A V+I +++VND  P F   +      +
Sbjct: 1979 KKSLDRETQSFYNLVVTVNDLAPPPITRFTSTAQVSIILLDVNDCPPTFTSQKMTYIQEN 2038

Query: 154  IPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIND-SGHISIV-DLSALNT 209
             P+      +V+   +A D D G    V  SLRGP+   FSI    G + ++ +L     
Sbjct: 2039 TPV-----DTVVFTTQATDADSGPNSYVEYSLRGPFGNKFSIGTIDGDVRLIGELDREEL 2093

Query: 210  STIQLVVVATDTGNPPRQASVPAIM 234
            S   L VVATD G PP  +++   M
Sbjct: 2094 SNYTLTVVATDKGEPPLSSTMDVTM 2118



 Score = 60.8 bits (146), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 74/261 (28%), Positives = 122/261 (46%), Gaps = 41/261 (15%)

Query: 12   TLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSA---LENLPVNYV-LLTV 67
            +LVV+A    +  R   AT+ +     +     F  + Y+V+    LENLP N + ++  
Sbjct: 2202 SLVVQAADRGSSPRVDRATVNIVLLDVNDCSPVFELSPYTVNVQENLENLPKNILQVIAR 2261

Query: 68   TTNKPRDLRVKYWLS--NDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDT---LM 122
              ++  + ++ Y LS  ND G  F++S  G +SL + LD E ++ Y   + ATD+    +
Sbjct: 2262 DDDQGANGQLSYMLSGGNDEGA-FTLSSSGQLSLTETLDREVQEKYILLITATDSGTPSL 2320

Query: 123  TTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS 182
            + + TV + V +VND  P F    +   +    + D   G+ +  V ++D D G    +S
Sbjct: 2321 SGTGTVTVMVDDVNDNVPVFTSSIFHTTI----MEDAPTGTDVLLVNSSDADVGVNGVIS 2376

Query: 183  LRGPYEKMFSINDS-GHI---SIVDLSALNTSTIQLVVVATDTG---------------- 222
            L G + + FSIN + G I   S++D    + +  QL+VVATD G                
Sbjct: 2377 LTGGHGQ-FSINPATGQIITSSLLDRE--DRANYQLLVVATDGGQPEGLSSSATVSVTVA 2433

Query: 223  ----NPPRQASVPAIMHFPEA 239
                NPPR    P + H P +
Sbjct: 2434 DINDNPPRFHHHPYVTHIPAS 2454



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 58/205 (28%), Positives = 98/205 (47%), Gaps = 17/205 (8%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTT-----NKPRDLRVKYWLSNDYGERFSISRQGDIS 98
            +F+K+ +  S  E+      LL V+      NK   LR      N+ G+    S  G ++
Sbjct: 1185 KFTKDIFQASISESAQNMTQLLRVSASDVDENKNGLLRYHIAEGNEEGQFTIDSSSGQVT 1244

Query: 99   LMQCLDYETEDSYRFTVYATDTL---MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIP 155
            L+  LDYE+  SY   + A D     +++S  ++IS+++ ND  P F  P+  L +    
Sbjct: 1245 LVGKLDYESTSSYSLKIIAVDAGAVPLSSSCMLSISILDENDNSPIF--PKSSLSVD--V 1300

Query: 156  LADLTPGSVIGKVEAADGDKGDR--VTLSLRGPY-EKMFSIN-DSGHISIVDLSALNTST 211
            L ++  G ++  V   D D G    +T S+        FSI+ ++G I +V      T +
Sbjct: 1301 LENMRIGELVASVTGTDADSGQNADITYSITATNNHGTFSISPNTGSIFLVKKLDFETQS 1360

Query: 212  I-QLVVVATDTGNPPRQASVPAIMH 235
              +L + A D G PPR +S+P ++H
Sbjct: 1361 FYKLNITAKDNGRPPRSSSIPVVIH 1385



 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 55/192 (28%), Positives = 97/192 (50%), Gaps = 11/192 (5%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVT-TNKPRDLRVKYWL-SNDYGERFSISRQGDISLMQC 102
           FS+  YS    EN+ V  V+ TV+ T    +  + Y + S D    F ++  G I+ +  
Sbjct: 770 FSQKVYSFVMFENVGVGTVIGTVSATTVDLNTNISYLITSGDQRGLFDVNSAGQITALSQ 829

Query: 103 LDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHI-PLADLTP 161
           +D E +  Y+  V A    +T  A VNI+V ++ND  P F +      + H+  + + + 
Sbjct: 830 IDREEQGFYQLKVVARAGEITGEAFVNITVKDLNDNAPHFIHT-----VEHVSAVENWST 884

Query: 162 GSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDS-GHISIVDLSALNTSTIQLVVVA 218
           G VI + +A+D D+G    V  SL+   + +F I++  G I++     + TS+ ++ V A
Sbjct: 885 GHVIFQAKASDPDEGANGMVVYSLKQNPKGLFHIHEKHGLITLTGPLEITTSSYEIEVSA 944

Query: 219 TDTGNPPRQASV 230
           +D G P   +S+
Sbjct: 945 SDMGVPQHTSSL 956



 Score = 55.5 bits (132), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 56/183 (30%), Positives = 91/183 (49%), Gaps = 16/183 (8%)

Query: 56   ENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGERFSISR-QGDISLMQCLDYETEDSY 111
            EN PV+ V+ T      +   +  V+Y L   +G +FSI    GD+ L+  LD E   +Y
Sbjct: 2037 ENTPVDTVVFTTQATDADSGPNSYVEYSLRGPFGNKFSIGTIDGDVRLIGELDREELSNY 2096

Query: 112  RFTVYATDTL---MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKV 168
              TV ATD     ++++  V + V++VND  P F    Y++ +      ++  G+ + +V
Sbjct: 2097 TLTVVATDKGEPPLSSTMDVTMVVLDVNDNTPSFSQNIYDIEIEE----NILTGTDVIQV 2152

Query: 169  EAADGDKG--DRVTLSLRGPYEKM-FSIND-SGHISIV-DLSALNTSTIQLVVVATDTGN 223
             A+D D+G   ++  S+ G      F I+  +G IS+   L     S+  LVV A D G+
Sbjct: 2153 FASDADEGTNGQIRFSISGGNTNSDFRIDSVTGVISVAKQLDREARSSYSLVVQAADRGS 2212

Query: 224  PPR 226
             PR
Sbjct: 2213 SPR 2215



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 54/212 (25%), Positives = 102/212 (48%), Gaps = 24/212 (11%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGERFSIS-RQGDISLM 100
           F +++Y  S  E+  V   +L +T    ++  +  ++Y+L  D G  F I  + G I + 
Sbjct: 235 FEQDQYQTSVFEDAAVGSSILEITASDQDEGANAEIRYFL--DEGTPFQIDPKAGTIIIK 292

Query: 101 QCLDYETEDSYRFTVYATDTLM-----TTSATVNISVVNVNDWDPRFRY-PQYELFLPHI 154
           + LDYE++  Y  T++A D  +      T AT+ +  VN ND   +FRY P    F    
Sbjct: 293 ESLDYESKKEYSLTIHAVDNGVPSLSGRTEATIKLLDVNDNDPVVKFRYFPTTSKFASVD 352

Query: 155 PLADLTPGSVIGKVEAADGD----KGDRVTLSLRGPYEKMFSINDS--GHISIVDLSAL- 207
             A +  G+V+  +  +D D     G+     L G  ++ F ++ S   ++S++ ++++ 
Sbjct: 353 ENAQI--GTVVALLTVSDADSSTANGNISVSILGGNEQRHFEVHTSPVPNLSLIKVASVL 410

Query: 208 ---NTSTIQLVVVATDTGNPPRQASVPAIMHF 236
                S+  L V  +D G P  ++S  +++ F
Sbjct: 411 DRERISSYNLTVSVSDNGKPMARSSFASLVIF 442



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/101 (31%), Positives = 49/101 (48%), Gaps = 5/101 (4%)

Query: 77   VKYWLSNDYGERFSIS-RQGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNV 135
            V Y + +   + F I    GD+   + LD E    Y   V A D   ++  T+NI+V +V
Sbjct: 1751 VTYTIISGADDSFRIDPESGDLIATKKLDRERRSKYSLLVRADDGKQSSDMTLNITVKDV 1810

Query: 136  NDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG 176
            ND  P+F    Y   +P     D+ PGS++  + A+D D G
Sbjct: 1811 NDHTPKFSRATYSFDIPE----DMVPGSIVAAILASDSDSG 1847



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 55/190 (28%), Positives = 87/190 (45%), Gaps = 13/190 (6%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGE-RFSIS-RQGDISLMQC 102
            F+ + +  + +E+ P    +L V ++   D+ V   +S   G  +FSI+   G I     
Sbjct: 2340 FTSSIFHTTIMEDAPTGTDVLLVNSSDA-DVGVNGVISLTGGHGQFSINPATGQIITSSL 2398

Query: 103  LDYETEDSYRFTVYATD----TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLAD 158
            LD E   +Y+  V ATD      +++SATV+++V ++ND  PRF +  Y   + HIP A 
Sbjct: 2399 LDREDRANYQLLVVATDGGQPEGLSSSATVSVTVADINDNPPRFHHHPY---VTHIP-AS 2454

Query: 159  LTPGSVIGKVEAADGDKGDRVTL--SLRGPYEKMFSINDSGHISIVDLSALNTSTIQLVV 216
               GS++  V   D D G    L  SL G   + F I+        +      S + L V
Sbjct: 2455 TAAGSLVFAVTVTDEDSGSNAQLHYSLMGRNAEKFKIDPVRGAITANERLTGNSEVTLTV 2514

Query: 217  VATDTGNPPR 226
               D G  P+
Sbjct: 2515 RVKDGGANPK 2524



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 58/208 (27%), Positives = 96/208 (46%), Gaps = 23/208 (11%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGERFSIS-RQGDISL 99
            +FSK  +S +  EN PV Y +  VTT   +   +   +Y ++ D    F+I+   GDI++
Sbjct: 2748 RFSK-IFSATVAENAPVGYTVTRVTTTDEDAGSNAISRYSIT-DTSLPFNINPNTGDITI 2805

Query: 100  MQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADL 159
             + L+ E  + Y   V A D+  T S  V + + ++ND  PRF  P Y L  P +     
Sbjct: 2806 SRPLNREDTNHYIVKVSAHDSGWTVSTDVTVFITDINDNAPRFSRPSYYLDYPELTEV-- 2863

Query: 160  TPGSVIGKVEAADGDK--GDRVTLSLRGPYEKMFSINDS-GHISI---------VDLSAL 207
              GS++ +V A D D+    ++   +R   E  F IN S G I +            S++
Sbjct: 2864 --GSLVTRVSATDPDEDFNGKIFYFIRSQSE-YFRINASTGEIFVKQQLKYQNSTGASSI 2920

Query: 208  NTSTIQLVVVATDTGNPPRQASVPAIMH 235
            N +    +V A+D    P  +    I++
Sbjct: 2921 NINRHSFIVTASDRALKPLMSETTVIVN 2948



 Score = 48.5 bits (114), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 65/243 (26%), Positives = 107/243 (44%), Gaps = 27/243 (11%)

Query: 13   LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKP 72
            L V+A    +++R + A + +   G +    +F   +Y     E+ P   V+  V  +  
Sbjct: 3242 LTVKAFNVPDEERCSFANVNIQLKGANEYVPRFVSKQYYFEISESAPKGTVVGEVFASD- 3300

Query: 73   RDLR---VKYWL--SNDYGERFSIS-RQGDISLMQCLDYETEDSYRFTVYATDTLMTTSA 126
            RD     V Y+L       + F I+ R G I +   LD E E+     V A +      A
Sbjct: 3301 RDQGEDGVVYYLIFGRSRKKGFGINKRTGQIYVTGTLDREKEEKVSLKVLAKNAGSIRGA 3360

Query: 127  T-----VNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDK---GDR 178
                  VNI++++ ND  P F    Y++ +       L+PG ++  V A D D      R
Sbjct: 3361 DIDEVFVNITILDAND-PPVFTNELYDVQVSE----GLSPGGLVTFVSAEDSDSVPSWSR 3415

Query: 179  VTLSLRGPYEK-MFSIN-DSGHISIVDLSALNTSTI---QLVVVATDTGNPPRQASVPAI 233
             + S+    +K +F+IN  +G +S+   + L+  TI    L V+A DTG PP   S   I
Sbjct: 3416 FSYSIAPESDKNIFTINAKTGQVSVA--AELDRETIPVYNLTVLAVDTGTPPATGSTTVI 3473

Query: 234  MHF 236
            ++ 
Sbjct: 3474 VNL 3476



 Score = 48.5 bits (114), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 57/198 (28%), Positives = 90/198 (45%), Gaps = 17/198 (8%)

Query: 49   EYSVSALENLPVNYVLLTVTTNKPRDLRVKYWL-SNDYGERFSISR-QGDISLMQCLDYE 106
            E + +  E+ P N+++ TVT +  R   + Y++ S +    F I +  G +S+   LDYE
Sbjct: 2547 ERAFTFPESQPSNHIVTTVTGSSMRGGPLSYYIASGNLDNAFHIDQLSGKLSIRHSLDYE 2606

Query: 107  TEDSYRFTVYATDTLM---TTSATVNISVVNVNDWDPRF-RYPQYELFLPHIPLADLTPG 162
                Y   + A D      ++   + I+V++VND  P F + P +   L ++P     P 
Sbjct: 2607 HIQKYVLWIEARDQGFPPYSSYEKLEITVLDVNDNHPVFDKDPFHAEILENLP-----PK 2661

Query: 163  SVIGKVEAADGDKGDRVTLS---LRGPYEKMFSINDS-GHISIVD-LSALNTSTIQLVVV 217
             V+  V A D D G    L    + G  E  FSIN + G I     L     +   L V 
Sbjct: 2662 GVL-MVSAVDLDSGPNGQLEYAIIEGNKENSFSINRATGEIRTTRPLDREKVALYTLKVK 2720

Query: 218  ATDTGNPPRQASVPAIMH 235
            ATD G PP+   V  +++
Sbjct: 2721 ATDRGLPPKNTIVKVLIN 2738



 Score = 42.7 bits (99), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 42/147 (28%), Positives = 73/147 (49%), Gaps = 12/147 (8%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTT-NKPRDLR--VKYWLS--NDYGERFSISRQGDIS 98
            +FS+++ S +  E+L V   + T++  +K +++   + Y ++  ND G     SR G +S
Sbjct: 3064 EFSQSQISATVPESLAVGTAIRTLSARDKDKEMNGLITYNITSGNDKGLFALNSRTGVLS 3123

Query: 99   LMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIP 155
            L   LD+E +  +   V ATD      T+  +V I V +VND  P F   +Y    P I 
Sbjct: 3124 LAHPLDFEEKQQHELRVSATDGGWIAKTSYVSVTIHVTDVNDNPPVFDPDEY---FP-IV 3179

Query: 156  LADLTPGSVIGKVEAADGDKGDRVTLS 182
              ++  G+ + K+ A D D G    ++
Sbjct: 3180 QENVPSGTTVIKLNATDLDSGANAVMA 3206



 Score = 38.5 bits (88), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 36/105 (34%), Positives = 52/105 (49%), Gaps = 7/105 (6%)

Query: 45   FSKNEYSVSALENLPVNYVLL--TVTTNKPRDLRVKYWLSNDYGER-FSISRQ-GDISLM 100
            F K+ +    LENLP   VL+   V  +   + +++Y +     E  FSI+R  G+I   
Sbjct: 2645 FDKDPFHAEILENLPPKGVLMVSAVDLDSGPNGQLEYAIIEGNKENSFSINRATGEIRTT 2704

Query: 101  QCLDYETEDSYRFTVYATDTLM---TTSATVNISVVNVNDWDPRF 142
            + LD E    Y   V ATD  +    T   V I+V++VND  PRF
Sbjct: 2705 RPLDREKVALYTLKVKATDRGLPPKNTIVKVLINVLDVNDNAPRF 2749



 Score = 37.7 bits (86), Expect = 9.3,   Method: Compositional matrix adjust.
 Identities = 43/144 (29%), Positives = 59/144 (40%), Gaps = 23/144 (15%)

Query: 97  ISLMQCLDYETEDSYRFTVYATDT----LMTTSATVNISVVNVNDWDPRFRYPQYELFLP 152
           I +   LD E   SY  TV  +D       ++ A++ I V ++ND  P F+   Y + + 
Sbjct: 404 IKVASVLDRERISSYNLTVSVSDNGKPMARSSFASLVIFVNDINDHPPIFQETVYRVDIS 463

Query: 153 HIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSGHISIVDLSALNTST- 211
                D+  GS I  V A DGD G    L        + S N  G  SI + S L TS  
Sbjct: 464 E----DIPKGSYIKGVSATDGDSGQNANLRY-----SLVSGNALGWFSISENSGLVTSAA 514

Query: 212 ---------IQLVVVATDTGNPPR 226
                    I L + A D G  P+
Sbjct: 515 LLDREIASEIVLNISAKDQGLQPK 538


>gi|340729964|ref|XP_003403262.1| PREDICTED: cadherin-87A-like [Bombus terrestris]
          Length = 1903

 Score = 69.7 bits (169), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 76/243 (31%), Positives = 108/243 (44%), Gaps = 46/243 (18%)

Query: 11  ITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTN 70
           I LVV    + N    + AT+ VS    +     FS   Y+   LE  P    +LT+T  
Sbjct: 477 IILVVAEEVHTNPKLSSTATVTVSITDANDNSPTFSNPTYTAVVLETAPPGTTVLTITA- 535

Query: 71  KPRD------LRVKYWLSNDYGERFSISRQ-GDISLMQC--------LDYETEDSYRFTV 115
           K RD        + Y L     + FS+ R+ G I++ QC        LDYE +  Y  T 
Sbjct: 536 KDRDSGRFGTAGIAYQLLGQGAQHFSVDRKTGVITVAQCPTPGVSPCLDYEEQTEYFLTY 595

Query: 116 YATDT---LMTTSATVNISVVNVNDWDPRFRYPQY--------ELFLPHIPLADLTPGSV 164
            ATD      TTS ++ IS+ + ND  PRF   +Y        E F P +          
Sbjct: 596 KATDNDGQGQTTSVSLRISLSDANDSPPRFLQDKYRAVIDEGAEKFEPDL---------- 645

Query: 165 IGKVEAADGDKGDRVTLSLRGPYE-KMFSIN-DSGHISI-----VDLSALNTSTIQLVVV 217
             KV+A D DK  ++T ++ G  E  +F+I+ D+G I+I     VDL+      I LV+ 
Sbjct: 646 --KVQARDKDKTSKITYAIVGGDELGLFAIDPDTGEITIKNKGPVDLTNSTHDWIALVIQ 703

Query: 218 ATD 220
           A D
Sbjct: 704 AND 706



 Score = 61.6 bits (148), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 48/153 (31%), Positives = 83/153 (54%), Gaps = 15/153 (9%)

Query: 95   GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFL 151
            G +   Q +DYE      FTV A D+    ++T+A V ++V+NVND DP+F   + EL+ 
Sbjct: 1010 GIVRTSQVIDYEETKQLEFTVVAYDSGVPQLSTTAKVIVTVINVNDQDPKF---EKELYN 1066

Query: 152  PHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSI-NDSGHISIVDLSALN 208
              +   +  PG+ +  V+A DGD+G    ++ SL G +   F+I +++G I++   + L+
Sbjct: 1067 ASVK-ENSPPGTHVTTVKATDGDEGPFGEISYSLIGDHAADFNIGHETGEITVGGATVLD 1125

Query: 209  ---TSTIQLVVVATDTG--NPPRQASVPAIMHF 236
               T  I + V+A+D    N  R  +VP ++  
Sbjct: 1126 REMTPNITITVMASDGAHINSRRSTTVPVLVKL 1158



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 58/199 (29%), Positives = 90/199 (45%), Gaps = 19/199 (9%)

Query: 45   FSKNEYSVSALENLPVNY---VLLTVTTNKPRDLRVKYWLSNDYG---ERFSISRQGDIS 98
            F+++ Y  S  ENLPVN    +L  +  +    +  + W +  +G   E FS++R+  I 
Sbjct: 1168 FTQHSYRASVAENLPVNPPAPILQVIAMDHDEGINGEVWYTIIHGNENESFSLNRETGIL 1227

Query: 99   LMQCLDYETEDSYRFTVYATDTL----MTTSATVNISVVNVNDWDPRFRYPQYELFLPHI 154
                       SYR  V A D       + + TV+I V +VN   P+F  P+       +
Sbjct: 1228 YPGAALLGRAGSYRIEVEARDGAGSGPHSDNCTVDIRVTSVNQHKPQFVLPELTNATVEV 1287

Query: 155  PLADLTPGSVIGKVEAADGDKGD--RVTLSL----RGPYE-KMFSIN-DSGHI-SIVDLS 205
            P        +I  V+A D D G+  RV+  L    R   E + FSI+ ++G + S + L 
Sbjct: 1288 PENTGVLNYLILTVKAIDRDPGENGRVSYHLKVGNRNTQETEEFSIDQETGELRSKIILD 1347

Query: 206  ALNTSTIQLVVVATDTGNP 224
                S  +LV+VA D G P
Sbjct: 1348 REVKSKFELVLVAADHGTP 1366



 Score = 47.4 bits (111), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 46/152 (30%), Positives = 74/152 (48%), Gaps = 17/152 (11%)

Query: 79  YWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDW 138
           + +  D GE  +I  +G + L       T D     + A D +   SATVNI++ +VN+ 
Sbjct: 671 FAIDPDTGE-ITIKNKGPVDLTNS----THDWIALVIQANDGIYVDSATVNITIRDVNNN 725

Query: 139 DPRFRYPQYELFLPHIPLADLTP-GSVIGKVEAADGDKGDRVTLSLR---GPYEKMFSIN 194
            P F     EL+   IP  +++P G+V+ +V A D D G    L  R   G ++  F++N
Sbjct: 726 APVF---TQELYTASIP--EISPIGTVVEEVTATDADTGINAELVYRIQKGAFDD-FTMN 779

Query: 195 DSGHISIV--DLSALNTSTIQLVVVATDTGNP 224
           ++  +  V   L   N +T  + V+A D G P
Sbjct: 780 ETTGVVTVFRKLDYDNKNTYHVEVIAFDKGTP 811


>gi|410914515|ref|XP_003970733.1| PREDICTED: protocadherin Fat 4-like [Takifugu rubripes]
          Length = 5463

 Score = 69.7 bits (169), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 73/264 (27%), Positives = 116/264 (43%), Gaps = 35/264 (13%)

Query: 1    DINEDDFLQPITLV---VRAIQYDNQDRYALATLIVSKAG--TSLREL-----------Q 44
            D +E   L P+T V    R + Y+ Q  Y L        G  +++R              
Sbjct: 2352 DEDETFLLNPVTGVFNVTRPLDYEVQQFYILTAKARDGGGQASTVRVYFNVLDVNDNPPA 2411

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWL-SNDYGERFSISRQGDISLM 100
            F+ + YS S  E+LP    ++TV  +   D    ++ Y + S D    F I++ G +   
Sbjct: 2412 FNTSVYSTSVSESLPAGSSIVTVGASDADDGPNAQLLYRIASGDPQSHFIITKDGVLKTQ 2471

Query: 101  QCLDYETEDSYRFTVYATD------TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHI 154
            + LD E++  Y   +   D      T  T++A V++ +++VND  P F   +      + 
Sbjct: 2472 KALDRESQSFYNLVITVNDLAPPPMTRFTSTAQVSVILLDVNDCPPTFTSQKMTYIQENT 2531

Query: 155  PLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIND-SGHISIV-DLSALNTS 210
            P+      +V+  V A+D D G    V  SLRGP+   FSI    G + +V +L     S
Sbjct: 2532 PV-----DTVVFAVHASDSDSGPNSYVEYSLRGPFSNKFSIGTIDGDVRLVGELDREELS 2586

Query: 211  TIQLVVVATDTGNPPRQASVPAIM 234
               L VVATD G PP  +++   M
Sbjct: 2587 NYTLTVVATDKGEPPLSSTMDVTM 2610



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 62/205 (30%), Positives = 100/205 (48%), Gaps = 17/205 (8%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLS--NDYGERFSISRQGDIS 98
            +F+K+ Y  S  E+ P    LL V+    ++ R+  V Y ++  N+ G+       G ++
Sbjct: 1677 KFTKDIYQASVSESAPNVTQLLRVSASDVDENRNGLVHYRVAEGNEEGQFMIDGSSGQVT 1736

Query: 99   LMQCLDYETEDSYRFTVYATDTL---MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIP 155
            L+  LDYET  SY   + A D     +++S  ++IS+++ ND  P F  P   + +    
Sbjct: 1737 LVGKLDYETTSSYSLKIIAVDAGAEPLSSSCMLSISILDENDNAPSFPKPSVSVDV---- 1792

Query: 156  LADLTPGSVIGKVEAADGDKGDR--VTLSLRGP-YEKMFSINDS-GHISIV-DLSALNTS 210
            L ++  G ++  V A D D G    +T S+        FSI+ S G I +V  L     S
Sbjct: 1793 LENMRIGELVASVTATDADSGQNADITYSITATNNHGTFSISPSTGSIFLVKKLDYETQS 1852

Query: 211  TIQLVVVATDTGNPPRQASVPAIMH 235
              +L V A D G PPR +S+P I+ 
Sbjct: 1853 VYRLNVSAKDNGRPPRSSSIPVIIQ 1877



 Score = 58.5 bits (140), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 47/137 (34%), Positives = 70/137 (51%), Gaps = 10/137 (7%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGERFSIS-RQGDISL 99
            +FSK  +S +  EN P  Y +  VTT   +   +   +Y ++ D G  F+I+   GDI++
Sbjct: 3240 RFSK-IFSATVAENAPAGYTVTRVTTTDEDAGSNAVSRYSIA-DTGLPFNINPSTGDITV 3297

Query: 100  MQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADL 159
             + L+ E  D Y   V A D+  T S  V I + ++ND  PRF  P Y L  P +     
Sbjct: 3298 SRPLNREDTDHYIVKVSAHDSGWTVSTDVTIFITDINDNAPRFSRPSYYLDYPELTEV-- 3355

Query: 160  TPGSVIGKVEAADGDKG 176
              GS++ +V A D DKG
Sbjct: 3356 --GSLVTQVTATDPDKG 3370



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 54/196 (27%), Positives = 96/196 (48%), Gaps = 11/196 (5%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVT-TNKPRDLRVKYWL-SNDYGERFSISRQGDISLMQC 102
            FS+  YS    EN+ V  V+ TV+ T    +  + Y + S D    F ++  G I+    
Sbjct: 1262 FSQKVYSFVMFENVGVGTVIGTVSATTVDLNTNISYLITSGDQRGLFGVNGAGQITASSQ 1321

Query: 103  LDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHI-PLADLTP 161
            +D E +  ++  V A    +T  A VN++V ++ND  P F +      + H+  + +   
Sbjct: 1322 VDREEQSFHQLKVVARAGEITGEAFVNVTVKDLNDNAPHFIHA-----VEHVSAVENWGT 1376

Query: 162  GSVIGKVEAADGDKGDR--VTLSLRGPYEKMFSINDS-GHISIVDLSALNTSTIQLVVVA 218
            G VI + +A+D D+G    V  SL+     +F I++  G I++     + TS+ ++ V+A
Sbjct: 1377 GHVIFQAKASDPDEGTNGVVVYSLKQNPRGLFHIHEKHGLITLTGPLEVTTSSYEVEVLA 1436

Query: 219  TDTGNPPRQASVPAIM 234
             D G P   +S+  I+
Sbjct: 1437 EDLGVPKHTSSLVLII 1452



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 51/163 (31%), Positives = 74/163 (45%), Gaps = 12/163 (7%)

Query: 81   LSNDYGERFSIS-RQGDISLMQCLDYETEDSYRFTVYATD----TLMTTSATVNISVVNV 135
            LS  +G+ FSI+   G I     LD E   +Y+  V ATD      +++SATV+++V ++
Sbjct: 2869 LSGGHGQ-FSINPATGQIITSSLLDREERANYQLLVVATDGGQPQGLSSSATVSVTVADI 2927

Query: 136  NDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTL--SLRGPYEKMFSI 193
            ND  PRF +  Y   + HIP A    GS++  V   D D G    L  SL G   + F I
Sbjct: 2928 NDNPPRFHHHPY---VTHIP-ASTAAGSLVFAVTVTDEDAGANAQLHYSLVGRSSEKFKI 2983

Query: 194  NDSGHISIVDLSALNTSTIQLVVVATDTGNPPRQASVPAIMHF 236
            +        +     TS + L V   D G  P+       + F
Sbjct: 2984 DPVRGAITANEKLTGTSEVTLSVRVKDGGANPKMDMTTVTVRF 3026



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 76/262 (29%), Positives = 121/262 (46%), Gaps = 43/262 (16%)

Query: 12   TLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSA---LENLPVNYV-LLTV 67
            +LVV+A    +  R   AT+ +     +     F  + Y++     LENLP N + ++  
Sbjct: 2694 SLVVQAADRGSSPRTDQATVNIVLLDVNDCSPVFELSPYTIGVQENLENLPTNILQVVAR 2753

Query: 68   TTNKPRDLRVKYWLS--NDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDTL---M 122
              ++  + ++ Y LS  ND G  FS+S  G +SL Q +D E    Y   + ATD+    +
Sbjct: 2754 DDDQGANGQLSYMLSGGNDEGA-FSLSSSGQLSLTQTVDREARSRYVLLITATDSGVPPL 2812

Query: 123  TTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTP-GSVIGKVEAADGDKGDRVTL 181
            + + TV +SV +VND  P F    +     H  + +  P G+ +  V ++D D G+   +
Sbjct: 2813 SGTCTVTVSVSDVNDNAPVFTASSF-----HTTITEDAPTGTDVLLVNSSDADVGNNGVI 2867

Query: 182  SLRGPYEKMFSINDS-GHI---SIVDLSALNTSTIQLVVVATDTG--------------- 222
            SL G + + FSIN + G I   S++D      +  QL+VVATD G               
Sbjct: 2868 SLSGGHGQ-FSINPATGQIITSSLLDRE--ERANYQLLVVATDGGQPQGLSSSATVSVTV 2924

Query: 223  -----NPPRQASVPAIMHFPEA 239
                 NPPR    P + H P +
Sbjct: 2925 ADINDNPPRFHHHPYVTHIPAS 2946



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 59/193 (30%), Positives = 95/193 (49%), Gaps = 18/193 (9%)

Query: 56   ENLPVNYVLLTV---TTNKPRDLRVKYWLSNDYGERFSISR-QGDISLMQCLDYETEDSY 111
            EN PV+ V+  V    ++   +  V+Y L   +  +FSI    GD+ L+  LD E   +Y
Sbjct: 2529 ENTPVDTVVFAVHASDSDSGPNSYVEYSLRGPFSNKFSIGTIDGDVRLVGELDREELSNY 2588

Query: 112  RFTVYATDTL---MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKV 168
              TV ATD     ++++  V + V++VND  P F    Y++ +    L     G+ + +V
Sbjct: 2589 TLTVVATDKGEPPLSSTMDVTMVVLDVNDNTPSFSQNIYDIEIEENTLT----GTDVIQV 2644

Query: 169  EAADGDKG--DRVTLSLRGPYEKM-FSIND-SGHISIV-DLSALNTSTIQLVVVATDTGN 223
             A D D+G   ++  S+ G      F I+  +G IS+   L     S+  LVV A D G+
Sbjct: 2645 FATDADEGTNGQIRFSIPGGNTNSDFRIDSVTGVISVAKQLDREARSSYSLVVQAADRGS 2704

Query: 224  PPR--QASVPAIM 234
             PR  QA+V  ++
Sbjct: 2705 SPRTDQATVNIVL 2717



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 34/111 (30%), Positives = 51/111 (45%), Gaps = 7/111 (6%)

Query: 77   VKYWLSNDYGERFSIS-RQGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNV 135
            V Y + +   + F I    GD+   + LD E    Y   V A D   ++   +NI+V +V
Sbjct: 2243 VTYTIISGADDSFRIDPESGDLIATKKLDRERRSKYSLLVRADDGKQSSDMRLNITVKDV 2302

Query: 136  NDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLR 184
            ND  P+F    Y   +P     D+  GS++  + A+D D G    VT SL 
Sbjct: 2303 NDHSPKFSRATYSFDIPE----DMAAGSIVAAILASDSDSGINGEVTYSLE 2349



 Score = 48.1 bits (113), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 44/148 (29%), Positives = 78/148 (52%), Gaps = 14/148 (9%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTT-NKPRDLR--VKYWLS--NDYGERFSI-SRQGDI 97
            +FS+++ S +  E++ V   + T++  +K R++   + Y ++  ND G  FSI SR G +
Sbjct: 3556 EFSQSQVSATVPESIAVGTAIRTLSARDKDREMNGVITYNITSGNDRG-LFSINSRSGVL 3614

Query: 98   SLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHI 154
            +L Q LD+E +  +   V ATD      T+  +V + V +VND  P F   +Y    P +
Sbjct: 3615 ALAQPLDFEEKQQHNLRVSATDGGWISKTSYVSVTVHVTDVNDNPPVFEPDEY---FP-V 3670

Query: 155  PLADLTPGSVIGKVEAADGDKGDRVTLS 182
               ++  G+ + K+ A DGD G    ++
Sbjct: 3671 VQENVPSGTTVVKMTATDGDSGANAVMA 3698



 Score = 47.8 bits (112), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 63/242 (26%), Positives = 103/242 (42%), Gaps = 21/242 (8%)

Query: 13   LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTV--TTN 70
            L V+A    +++R + A + +   G +    +F   +Y     E  P   V+  V  +  
Sbjct: 3734 LTVKAFNVPDEERCSFANVNIQLKGANEYVPRFVSKQYYFEISEAAPKGTVVGEVFASDR 3793

Query: 71   KPRDLRVKYWL--SNDYGERFSISRQ-GDISLMQCLDYETEDSYRFTVYATDTLMTTSAT 127
               D  V Y+L       + F I+R  G I +   LD E E+     V A +      A 
Sbjct: 3794 DQGDDGVVYYLIFGKSRKKGFGINRTTGQIYVTGTLDREKEEKISLKVLAKNAGSIRGAD 3853

Query: 128  -----VNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDK---GDRV 179
                 VNI++++ ND  P F    Y++ +       L+ G ++  V A D D      R 
Sbjct: 3854 IDEVFVNITILDAND-PPVFTQELYDVQVSE----GLSLGGLVTFVSAEDSDSVPSWSRF 3908

Query: 180  TLSLRGPY-EKMFSIN-DSGHISIVD-LSALNTSTIQLVVVATDTGNPPRQASVPAIMHF 236
            + S+   + +K+FSIN  +G +S+   L    T    L V+A DTG PP   S   I++ 
Sbjct: 3909 SYSIAPEHDQKIFSINAKTGQVSVAAPLDRETTPVYNLTVLAVDTGTPPATGSTTVIVNL 3968

Query: 237  PE 238
             +
Sbjct: 3969 ED 3970



 Score = 45.1 bits (105), Expect = 0.052,   Method: Compositional matrix adjust.
 Identities = 55/197 (27%), Positives = 90/197 (45%), Gaps = 15/197 (7%)

Query: 49   EYSVSALENLPVNYVLLTVTTNKPRDLRVKYWL-SNDYGERFSISR-QGDISLMQCLDYE 106
            E + +  E+ P N+V+ TVT +  R   + Y++ S +    F I +  G++S+   LDYE
Sbjct: 3039 ERAFTFPESQPTNHVVTTVTGSSMRGGPLSYYIASGNLDHAFHIDQLSGELSIRHPLDYE 3098

Query: 107  TEDSYRFTVYATDTLM---TTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGS 163
                Y   + A D      ++   V I++ +VND  P F    ++  +    L +L+P  
Sbjct: 3099 HIQKYVLWIEARDQGFPPYSSYGKVEITIQDVNDNHPVFDKDPFQADI----LENLSPQR 3154

Query: 164  VIGKVEAADGDKGDRVTLS---LRGPYEKMFSINDS-GHISIVD-LSALNTSTIQLVVVA 218
            V+  V A D D G    L    + G  +  FSIN + G I     L     +   L V A
Sbjct: 3155 VL-IVSALDLDSGPNGQLEYAIVDGNKDNSFSINRATGEIRTTRPLDREKVAQYGLKVKA 3213

Query: 219  TDTGNPPRQASVPAIMH 235
            TD G P +  +V  +++
Sbjct: 3214 TDRGLPQKNMAVRVLIN 3230



 Score = 43.5 bits (101), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 42/139 (30%), Positives = 64/139 (46%), Gaps = 11/139 (7%)

Query: 45   FSKNEYSVSALENLPVNYVLLTV-TTNKPRDL--RVKYWLS-NDYGERFSISRQGDISLM 100
            F +  Y V+ LE+ PVN     V  T+K       + Y ++  +  + F I   G + + 
Sbjct: 1464 FDQLSYEVTILESEPVNSRFFKVEATDKDSGFNGEIMYDITGGNTADVFGIFPDGQLYIK 1523

Query: 101  QCLDYETEDSYRFTVYATDTLMTT-SATVNISVV--NVNDWDPRFRYPQYELFLPHIPLA 157
              LD E +D Y   + A D  +   SA+VN+SV+  +VND  P F    Y          
Sbjct: 1524 AELDREIQDRYNLVLVAKDRAVEPLSASVNVSVLLDDVNDNRPLFNSTNYVFHFAE---- 1579

Query: 158  DLTPGSVIGKVEAADGDKG 176
            +   GS++G+V A D D G
Sbjct: 1580 EQKRGSLVGRVFAEDKDFG 1598



 Score = 42.0 bits (97), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 44/139 (31%), Positives = 63/139 (45%), Gaps = 13/139 (9%)

Query: 97   ISLMQCLDYETEDSYRFTVYATDT----LMTTSATVNISVVNVNDWDPRFRYPQYELFLP 152
            I +   LD E   SY  TV  +D       ++ A++ I V ++ND  P F+  +Y + + 
Sbjct: 896  IKVASVLDRERISSYNLTVSVSDNGRPVARSSFASLVIFVNDINDHPPIFQETEYRVDVS 955

Query: 153  HIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIND-SGHISIVD-LSAL 207
                 D+  GS I  V A DGD G    L    + G     FSI++ SG ++    L   
Sbjct: 956  E----DIPKGSYIKGVSATDGDSGQNANLRYSLVSGNALGWFSISENSGLVTSAGLLDRE 1011

Query: 208  NTSTIQLVVVATDTGNPPR 226
             TS I L + A D G  PR
Sbjct: 1012 TTSEIVLNISAKDQGLQPR 1030



 Score = 41.6 bits (96), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 37/107 (34%), Positives = 54/107 (50%), Gaps = 10/107 (9%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVT-----TNKPRDLRVKYWLSNDYGERFSIS-RQGDIS 98
            F K   SV  LEN+ +  ++ +VT     + +  D+      +N++G  FSIS   G I 
Sbjct: 1783 FPKPSVSVDVLENMRIGELVASVTATDADSGQNADITYSITATNNHGT-FSISPSTGSIF 1841

Query: 99   LMQCLDYETEDSYRFTVYATDTL---MTTSATVNISVVNVNDWDPRF 142
            L++ LDYET+  YR  V A D      ++S  V I V + ND  P F
Sbjct: 1842 LVKKLDYETQSVYRLNVSAKDNGRPPRSSSIPVIIQVRDFNDNPPIF 1888



 Score = 40.0 bits (92), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 30/110 (27%), Positives = 56/110 (50%), Gaps = 11/110 (10%)

Query: 89   FSISRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVND--WDPRFR 143
            FS+S+ G ++  + +D E    +  +V   D     M+++ T+++ + + ND   +PR  
Sbjct: 4026 FSLSQNGVLTTSREIDREQISDFYLSVVIKDAGVPQMSSTGTIHVKINDQNDNPSEPR-- 4083

Query: 144  YPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSI 193
                E+F+ +    ++ PG  +G+V+  D D  DR   SL  P   +FSI
Sbjct: 4084 --SVEVFVHY--FGNMFPGGSLGEVKPQDPDVQDRFHCSLIPPSSGLFSI 4129


>gi|443686141|gb|ELT89521.1| hypothetical protein CAPTEDRAFT_222417 [Capitella teleta]
          Length = 1123

 Score = 69.7 bits (169), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 118/251 (47%), Gaps = 19/251 (7%)

Query: 45  FSKNEYSVSALEN----LPVNYVLLTVTTNKPRDLRVKYWLSNDYGERFSIS-RQGDISL 99
           F+K +Y +S  EN     PV +V  +   +   +  V   L++ +   F+I    G+I  
Sbjct: 564 FTKPQYDLSVKENQLKYYPVGHVSASDRDSGSFNRFVFSLLNDGHSGTFAIDPDSGEIKT 623

Query: 100 MQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
           +Q LD E  D Y  T  ATD    L+++S  V I V +VND  P   YP  E       +
Sbjct: 624 LQVLDREDRDIYYITAIATDLDQPLLSSSCMVVIKVEDVNDNFPVIEYPTRE--NNSFSI 681

Query: 157 ADLTP-GSVIGKVEAADGDKGDRVTLSL---RGPYEKMFSIN-DSGHISIVD-LSALNTS 210
           ++  P G  I KV A+D D+G    LS     G Y + F IN  SG +S       ++  
Sbjct: 682 SNRVPRGHEIIKVFASDADQGLNAMLSYYIDSGNYNQAFMINVTSGMLSTKGTFEGVSYE 741

Query: 211 TIQLVVVATDTGNPPRQASVPAIMHFPEAIVQQAS--SKLNSGTS-STVLIILGVVLIVL 267
             ++ +   D G PPR A++   +   E     AS   K   G++ S  L I+ +V  V 
Sbjct: 742 AYEITLKVNDHGRPPRSATMVLQIIVDELTPYYASPREKQAGGSAKSNNLTIIIIVAAVS 801

Query: 268 GFVIILLILYI 278
           GF++++LI+ I
Sbjct: 802 GFIMVILIIAI 812



 Score = 47.4 bits (111), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 43/144 (29%), Positives = 67/144 (46%), Gaps = 12/144 (8%)

Query: 89  FSISRQGDISLMQCLDYETEDSYRFTVYATDTL---MTTSATVNISVVNVNDWDPRFRYP 145
           + I  +G +      DYET    +FTV A D      +++A V I+++++ND  P F  P
Sbjct: 508 YIIPNKGVVRASDRFDYETTKKLQFTVRARDGASPPRSSTARVTITILDLNDQPPIFTKP 567

Query: 146 QYELFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLS-LRGPYEKMFSIN-DSGHISI 201
           QY+L +    L        +G V A+D D G  +R   S L   +   F+I+ DSG I  
Sbjct: 568 QYDLSVKENQLKYYP----VGHVSASDRDSGSFNRFVFSLLNDGHSGTFAIDPDSGEIKT 623

Query: 202 VD-LSALNTSTIQLVVVATDTGNP 224
           +  L   +     +  +ATD   P
Sbjct: 624 LQVLDREDRDIYYITAIATDLDQP 647


>gi|291387504|ref|XP_002710310.1| PREDICTED: protocadherin gamma subfamily A, 5 [Oryctolagus
           cuniculus]
          Length = 811

 Score = 69.7 bits (169), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 64/196 (32%), Positives = 94/196 (47%), Gaps = 23/196 (11%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRDL---RVKYWLSNDYG---ERFSI-SRQGDI 97
           F+++EY V+  EN+PV   L+T+T   P +    ++ Y   N+     E F + S  G+I
Sbjct: 242 FARSEYRVNVPENVPVGTRLITLTATDPDEGVYGKLTYSFRNEEDKIRETFQLDSNLGEI 301

Query: 98  SLMQCLDYETEDSYRFTVYATD-TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
           S MQ LDYET   Y   V A D   +  SA V I+V +VND  P       EL L  +  
Sbjct: 302 STMQSLDYETASFYHMEVVAQDGGALLASAKVLITVQDVNDNAP-------ELILTSLTS 354

Query: 157 A---DLTPGSVIGKVEAADGDKGD--RVTLSLRG--PYEKMFSINDSGHISIVD-LSALN 208
           +   D  PG++I      DGD G+   +  S+ G  P++   S++D  H+   + L    
Sbjct: 355 SVAEDCPPGTLIALFSVHDGDSGENGEIECSIPGNLPFKLERSVDDYYHLLTTNALDREE 414

Query: 209 TSTIQLVVVATDTGNP 224
           TS   + V   D G P
Sbjct: 415 TSDYNITVTVIDRGTP 430



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 80/303 (26%), Positives = 127/303 (41%), Gaps = 53/303 (17%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKP---RDLRVKYWLSNDYGERFSISR-------Q 94
           F    Y  S  EN P    + ++T + P    + +V Y L++   +   +S         
Sbjct: 452 FPHTSYHTSLPENNPRGVSIFSLTAHDPDSGNNAQVTYSLADSAFQGAPLSSYISINSDT 511

Query: 95  GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFL 151
           G +  ++  DYE     +  V A+D+    ++++ ++ + VV+ ND  P   YP     L
Sbjct: 512 GVLYALRSFDYEQFRDLQLWVTASDSGDPPLSSNVSLTLFVVDQNDNAPEILYPT----L 567

Query: 152 P-----HIPLADLT--PGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-DSGHI- 199
           P      + LA     PG ++ KV A D D G    LS   L+     +F++   +G + 
Sbjct: 568 PTDGSTGVELAPRAAEPGYLVTKVVAVDRDSGQNAWLSYRLLKASEPGLFAVGLHTGEVR 627

Query: 200 ---SIVDLSALNTSTIQLVVVATDTGNPPRQASVPAIM----HFPEAIVQQASSK--LNS 250
               ++D  AL  S   LVV   D G PP  A+V   +      P+ +    S K  +N 
Sbjct: 628 TARGLLDRDALKQS---LVVAVQDHGQPPLSATVTLTVAVADSIPDVLADLGSIKTPING 684

Query: 251 GTSSTVLIILGVV----LIVLGFVIILLILYI---HKNK-----HTKNNGPPGSSHSKND 298
             S   L ++  V     I L FVIILL L +   HK++       +  G P S     D
Sbjct: 685 NDSDLTLYLVVAVATVSCIFLAFVIILLALRLRHWHKSRLLQASRGRLAGIPASHFVGVD 744

Query: 299 SFL 301
           +FL
Sbjct: 745 TFL 747



 Score = 38.1 bits (87), Expect = 7.1,   Method: Compositional matrix adjust.
 Identities = 43/143 (30%), Positives = 63/143 (44%), Gaps = 19/143 (13%)

Query: 102 CLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLAD 158
            LD E    Y  TV   D     ++T   + + V +VND  P F +  Y     H  L +
Sbjct: 409 ALDREETSDYNITVTVIDRGTPALSTENHIFLKVADVNDNPPTFPHTSY-----HTSLPE 463

Query: 159 LTP-GSVIGKVEAADGDKGD--RVTLSLR------GPYEKMFSIN-DSGHI-SIVDLSAL 207
             P G  I  + A D D G+  +VT SL        P     SIN D+G + ++      
Sbjct: 464 NNPRGVSIFSLTAHDPDSGNNAQVTYSLADSAFQGAPLSSYISINSDTGVLYALRSFDYE 523

Query: 208 NTSTIQLVVVATDTGNPPRQASV 230
               +QL V A+D+G+PP  ++V
Sbjct: 524 QFRDLQLWVTASDSGDPPLSSNV 546


>gi|194208467|ref|XP_001502920.2| PREDICTED: protocadherin Fat 4 isoform 1 [Equus caballus]
          Length = 4981

 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 76/270 (28%), Positives = 122/270 (45%), Gaps = 44/270 (16%)

Query: 2    INEDD-----FLQPITLV---VRAIQYDNQDRYALATLIVSKAGTSLRELQ--------- 44
            ++EDD     FL P+T V    R + Y+ Q  Y L T+     G     ++         
Sbjct: 1880 VSEDDEDGIFFLNPVTGVFNLTRILDYEAQQYYIL-TVRAEDGGGQFTTIRIYFNILDVN 1938

Query: 45   -----FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWL-SNDYGERFSISRQG 95
                 FS N YS S +ENLP+   +L        D    ++ Y + S D   +F++ + G
Sbjct: 1939 DNPPIFSLNSYSTSLMENLPLGSTVLVFNVTDADDGINSQLAYSIASGDSLGQFTVDKNG 1998

Query: 96   DISLMQCLDYETEDSYRFTVYATD------TLMTTSATVNISVVNVNDWDPRFRYPQYEL 149
             + +++ LD E++  Y   V   D      +  T++A V+I +++VND  P F  P+   
Sbjct: 1999 VLKVLKALDRESQSFYNLVVQVHDLPQLPASRFTSTAQVSIILLDVNDNPPTFLSPK--- 2055

Query: 150  FLPHIPLADLTP-GSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIND-SGHISIV-DL 204
             L +IP  + TP  +V+ K +A D D G    +  +L  P    FSI    G + +  +L
Sbjct: 2056 -LTYIP--ENTPIDTVVFKAQATDPDSGPNSYIEYTLLNPLGNKFSIGTIDGEVRLTGEL 2112

Query: 205  SALNTSTIQLVVVATDTGNPPRQASVPAIM 234
                 S   L+VVATD G P   +S   ++
Sbjct: 2113 DREEVSNYTLMVVATDKGQPSLSSSTEVVV 2142



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 61/191 (31%), Positives = 92/191 (48%), Gaps = 22/191 (11%)

Query: 50   YSVSALENLPVNYVLLTVTTNKPRDL---RVKYWLSNDYGERFSIS-RQGDISLMQCLDY 105
            +S   LEN P+ Y +  VTT+   D+    +  +   D    F+I+   GDI + + L+ 
Sbjct: 2777 FSAHVLENSPLGYTVTRVTTSD-EDIGINAISRYSVMDTSLPFTINPSTGDIVISRPLNR 2835

Query: 106  ETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVI 165
            E  D YR  V A D+  T S  V I V +VND  PRF  P Y L  P   L ++  GS +
Sbjct: 2836 EDTDRYRIRVSAHDSGWTVSTDVTIFVTDVNDNAPRFSRPSYYLDCPE--LTEI--GSKV 2891

Query: 166  GKVEAADGDKGD--RVTLSLRGPYEKMFSIN-DSGHI---------SIVDLSALNTSTIQ 213
             +V A+D D+G   +V   ++   E  F IN  +G I         ++   S +N +   
Sbjct: 2892 TQVSASDPDEGSNGQVFYFIKSQSE-YFRINATTGEIFNKQVLKYQNVSGFSNVNINRHS 2950

Query: 214  LVVVATDTGNP 224
             +V ++D GNP
Sbjct: 2951 FIVTSSDRGNP 2961



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 51/169 (30%), Positives = 87/169 (51%), Gaps = 14/169 (8%)

Query: 77   VKYWLSNDYGER-FSI-SRQGDISLMQCLDYETEDSYRFTVYATD---TLMTTSATVNIS 131
            + Y++     ER F+I S  G ++L+  LDYE   +Y   + A D   T + ++ T+NI 
Sbjct: 1245 IHYYVIKGNEERQFAIDSTSGQVTLIGKLDYEATPAYSLVIQAVDSGATSLNSTCTLNID 1304

Query: 132  VVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTL--SLRGPY-E 188
            +++ ND  P F  P+  LF+    L ++  G ++  V A D D GD   L  S+ G    
Sbjct: 1305 ILDENDNTPSF--PKSTLFVDV--LENMRIGELVSSVTATDSDSGDNADLHYSITGTNNH 1360

Query: 189  KMFSIN-DSGHISIVDLSALNTSTI-QLVVVATDTGNPPRQASVPAIMH 235
              FSI+ ++G I +       T ++ +L + A D G PPR +++  ++H
Sbjct: 1361 GTFSISPNTGSIFLAKKLDFETQSLYKLNITAKDQGRPPRSSTMSVVIH 1409



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 34/101 (33%), Positives = 49/101 (48%), Gaps = 5/101 (4%)

Query: 77   VKYWLSNDYGERFSIS-RQGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNV 135
            V Y + +   + F I    GD+   + LD E    Y   V A D L ++   +NI+V +V
Sbjct: 1775 VTYTIISGADDSFRIDPESGDLIATKRLDRERRSKYSLLVRADDGLQSSDMRINITVSDV 1834

Query: 136  NDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG 176
            ND  P+F  P Y   +P     D TPGS++  + A D D G
Sbjct: 1835 NDHTPKFSRPVYSFDIPE----DTTPGSLVAAILATDDDSG 1871



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 55/183 (30%), Positives = 87/183 (47%), Gaps = 16/183 (8%)

Query: 56   ENLPVNYVLLTVTTNKPR---DLRVKYWLSNDYGERFSISR-QGDISLMQCLDYETEDSY 111
            EN P++ V+       P    +  ++Y L N  G +FSI    G++ L   LD E   +Y
Sbjct: 2061 ENTPIDTVVFKAQATDPDSGPNSYIEYTLLNPLGNKFSIGTIDGEVRLTGELDREEVSNY 2120

Query: 112  RFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKV 168
               V ATD     +++S  V + V+++ND +P F    Y++ +    L     G+ I +V
Sbjct: 2121 TLMVVATDKGQPSLSSSTEVVVMVLDINDNNPIFAQALYKVEINENTLT----GTDIIQV 2176

Query: 169  EAADGDKGDRVTLS---LRGPYEKMFSIND-SGHISIVD-LSALNTSTIQLVVVATDTGN 223
             A DGD+G    +    + G   + F I+  +G I++   L    T T  L V ATD G+
Sbjct: 2177 CATDGDEGTNGQVRYGIVDGDANQEFRIDSVTGAITVAKPLDREKTPTYFLTVQATDRGS 2236

Query: 224  PPR 226
             PR
Sbjct: 2237 TPR 2239



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 58/190 (30%), Positives = 94/190 (49%), Gaps = 15/190 (7%)

Query: 56   ENLPVNYVLLTVTTNKPRDLRVKYWL-SNDYGERFSISR-QGDISLMQCLDYETEDSYRF 113
            EN PV  ++ T+T +  R   + Y++ S + G  F I +  G +S+ Q LD+E    Y  
Sbjct: 2578 ENQPVGTLVTTITGSSLRGEPLSYYIASGNLGNTFQIDQLTGQVSVSQPLDFEKIQKYVV 2637

Query: 114  TVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEA 170
             + A D      ++   ++I+V++VND  P F+    + F+  I L +L+P  ++  V A
Sbjct: 2638 WIEARDGGFPPFSSYEKLDITVLDVNDNSPIFK---EDPFVSEI-LENLSPRKIL-TVLA 2692

Query: 171  ADGDKGDRVTLS---LRGPYEKMFSINDS-GHI-SIVDLSALNTSTIQLVVVATDTGNPP 225
             D D G    L    + G  E  FSIN + G I SI  L     S   L + ++D G+P 
Sbjct: 2693 MDKDSGPNGQLDYEIVNGNKEHSFSINHATGEIRSIRPLDREKISQYVLTIKSSDKGSPS 2752

Query: 226  RQASVPAIMH 235
            +  SV  I++
Sbjct: 2753 QSTSVKVIIN 2762



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 57/198 (28%), Positives = 88/198 (44%), Gaps = 24/198 (12%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLS-NDYGERFSISRQGDISLM 100
            F +  Y V+  E+ PVN     V     +   +  + Y ++  + G+ F I   G + + 
Sbjct: 996  FDQLSYEVTLSESEPVNSRFFKVQAFDKDSGANGEIAYSIAEGNTGDAFGIFPDGQLYIK 1055

Query: 101  QCLDYETEDSYRFTVYATDTLMTT-SATVNISVV--NVNDWDPRFRYPQYELFLPHIPLA 157
              LD E +D Y   V A+D  +   SATVN++++  +VND  P F    Y  +      A
Sbjct: 1056 SELDRELQDRYVLLVIASDRAVEPLSATVNVTIILEDVNDNRPLFNSTNYTFYFEEEQRA 1115

Query: 158  DLTPGSVIGKVEAADGDKGD----RVTLSLRGPYEKMFSINDSGHIS---IVDLSAL--- 207
                GS +GKV A D D G     R +  +  P  ++ +I  SG I+     D  +L   
Sbjct: 1116 ----GSSVGKVSALDKDFGPNGEVRYSFEMVQPDFELHAI--SGEITNTRQFDRESLMRQ 1169

Query: 208  -NTSTIQLVVVATDTGNP 224
              T+     V+ATD G P
Sbjct: 1170 RGTAVFSFTVIATDQGLP 1187



 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 50/175 (28%), Positives = 79/175 (45%), Gaps = 32/175 (18%)

Query: 89   FSISRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYP 145
            F++S  G++ + Q LD ET++ +   + ATD     +T + T+N+ V ++ND  P F   
Sbjct: 2308 FTLSASGELRVTQSLDRETKEHFVLVITATDAGSPALTGTGTINVIVDDINDNVPTF--- 2364

Query: 146  QYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSGHISIVDLS 205
              +++L  IP  D   G+ +  V A+D D      + L G     F+IN S    I+  +
Sbjct: 2365 PSKMYLTTIP-EDAPTGTDVLLVNASDADASTNAVIRLIGG-NSQFTINPSTG-QIITSA 2421

Query: 206  ALNTSTIQ---LVVVATDTG--------------------NPPRQASVPAIMHFP 237
             L+  T +   LVVV +D G                    NPPR    P + H P
Sbjct: 2422 LLDRETKENYTLVVVCSDAGSPEPLSSSTSVVVTVTDVNDNPPRFQHHPYVTHIP 2476



 Score = 51.6 bits (122), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 49/187 (26%), Positives = 95/187 (50%), Gaps = 12/187 (6%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRDLR--VKYWLS-NDYGERFSISR-QGDISLM 100
           FS+  YS    EN+ + Y + +V+ +   DL   + Y ++  D    F+I++  G ++  
Sbjct: 793 FSQAAYSFVVFENVALGYHVGSVSAST-MDLNSNISYLITTGDQKGMFAINQVTGQLTTA 851

Query: 101 QCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLT 160
             +D E +  Y+  V A+   +T    VNI+V ++ND  P F      + +    + +  
Sbjct: 852 SVIDREEQSFYQLKVVASGGTVTGDTMVNITVKDLNDNSPHFLQAVESVNV----VENWQ 907

Query: 161 PGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIND-SGHISIVDLSALNTSTIQLVVV 217
            G  I + +A D D+G    V  SL+   + +F+IN+ +G+IS++    ++  + Q+ ++
Sbjct: 908 TGHSIFQAKAVDPDEGVNGMVLYSLKQNPKNLFTINEKNGNISLLGPLDVHAGSYQIEIL 967

Query: 218 ATDTGNP 224
           A+D G P
Sbjct: 968 ASDMGVP 974



 Score = 51.2 bits (121), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 74/237 (31%), Positives = 104/237 (43%), Gaps = 22/237 (9%)

Query: 11  ITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNE-YSVSALENLPVNYVLLTVTT 69
           I L + A       + + A L+V+    +  +  FS+ E Y VS +EN P    LL +  
Sbjct: 548 IVLNISARDQGVHPKVSYAQLVVTLLDVNDEKPVFSQPEGYDVSVVENAPTGTELLVLGA 607

Query: 70  NKPRDL----RVKYWLSNDYGERFSI---SRQGDISLMQCLDYETEDSYRFTVYATD--- 119
               DL     V++ L     ++ S    S  G +S +  LD E +  Y   V ATD   
Sbjct: 608 TD-GDLGDNGTVRFSLQEAETDQRSFRLDSVSGRLSTISSLDREEQGFYSLLVLATDLGS 666

Query: 120 TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG--D 177
              ++ A +N+S+++VND  P F   QY     HI   +   GS I  V A D D G   
Sbjct: 667 PPQSSIARINVSLLDVNDNSPVFYPVQY---FAHI-QENEPGGSYITTVSATDPDLGLNG 722

Query: 178 RVTLSLRGPYEKMFSIN-DSGHISI-VDLSALNTSTIQLVVVATDTGN--PPRQASV 230
            V  S+       F +N  SG IS  + L     +  QL +VATD GN   P QA V
Sbjct: 723 TVRYSISAGDRSRFQVNAQSGVISTRMALDREEKTAYQLQIVATDGGNLQSPNQAIV 779



 Score = 47.0 bits (110), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 49/172 (28%), Positives = 79/172 (45%), Gaps = 17/172 (9%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGERFSIS-RQGDISLM 100
            F  +EY  + LEN P    ++ +     +   +  + Y + +   + F I    G I+  
Sbjct: 3194 FLPDEYFPTVLENAPSGTTVIHLNATDDDSGTNAVIAYTIQSSDSDLFVIDPNTGVITTQ 3253

Query: 101  QCLDYETEDSYRFTVYA---TDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLA 157
              LD+ET+ SY  TV A    D    + ATVNI +   N++ PRF    Y     +  ++
Sbjct: 3254 GFLDFETKQSYHLTVKAFNVPDEERCSFATVNIQLRGTNEYVPRFVSKLY-----YFEIS 3308

Query: 158  DLTP-GSVIGKVEAAD---GDKGDRVTLSLRGPYEKMFSIN-DSGHISIVDL 204
            +  P G+V+G+V A+D   G  G+   L      +K F IN  +G I +  L
Sbjct: 3309 EAAPKGTVVGEVFASDRDLGTDGEVHYLIFGNSRKKGFQINKKTGQIYVSGL 3360



 Score = 41.2 bits (95), Expect = 0.97,   Method: Compositional matrix adjust.
 Identities = 46/149 (30%), Positives = 70/149 (46%), Gaps = 12/149 (8%)

Query: 95   GDISLMQCLDYETEDSYRFTVYATDTL----MTTSATVNISVVNVNDWDPRFRYPQYELF 150
            G I     LD ET+++Y   V  +D      +++S +V ++V +VND  PRF   Q+  +
Sbjct: 2415 GQIITSALLDRETKENYTLVVVCSDAGSPEPLSSSTSVVVTVTDVNDNPPRF---QHHPY 2471

Query: 151  LPHIPLADLTPGSVIGKVEAADGDKGDRVTL--SLRGPYEKMFSINDSGHISIVDLSALN 208
            + HIP +   PGS +  V   D D G    L  SL G + + F I D    +I+    LN
Sbjct: 2472 VTHIP-SPTPPGSFVFAVTVTDADIGPNSELHYSLSGRHSEKFHI-DPLRGAIMAAGPLN 2529

Query: 209  -TSTIQLVVVATDTGNPPRQASVPAIMHF 236
              S +   V   D G+ P+  S    + F
Sbjct: 2530 GASEVTFSVHVKDGGSFPKTDSTTVTVRF 2558



 Score = 38.5 bits (88), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 31/108 (28%), Positives = 55/108 (50%), Gaps = 7/108 (6%)

Query: 89   FSISRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYP 145
            FS++  G +S  + +D E    +  +V   D+    M+++ TV+I+V++ ND   + R  
Sbjct: 3558 FSLNTAGVLSTTREIDREQIADFYLSVVTRDSGVPQMSSTGTVHITVIDQNDNPSQSR-- 3615

Query: 146  QYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSI 193
              E+F+ +    +L PG ++G V+  D D  D    SL      +FSI
Sbjct: 3616 TVEVFVNY--YGNLFPGGILGSVKPQDPDVLDTFHCSLTSGVTSLFSI 3661



 Score = 37.7 bits (86), Expect = 9.1,   Method: Compositional matrix adjust.
 Identities = 51/191 (26%), Positives = 84/191 (43%), Gaps = 36/191 (18%)

Query: 11   ITLVVRAIQYDNQDRYALATLIVSKAGTSLREL---------------QFSKNEYSVSAL 55
            +TL+ + + Y+    Y+L    V    TSL                   F K+   V  L
Sbjct: 1267 VTLIGK-LDYEATPAYSLVIQAVDSGATSLNSTCTLNIDILDENDNTPSFPKSTLFVDVL 1325

Query: 56   ENLPVNYVLLTVT-----TNKPRDLRVKYWLSNDYGERFSIS-RQGDISLMQCLDYETED 109
            EN+ +  ++ +VT     +    DL      +N++G  FSIS   G I L + LD+ET+ 
Sbjct: 1326 ENMRIGELVSSVTATDSDSGDNADLHYSITGTNNHGT-FSISPNTGSIFLAKKLDFETQS 1384

Query: 110  SYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELF---LPHIPLADLTPGS 163
             Y+  + A D      +++ +V I V + ND  P F  P  ++F   + +IP+     G+
Sbjct: 1385 LYKLNITAKDQGRPPRSSTMSVVIHVRDFNDNPPSF--PPGDIFKSIVENIPI-----GT 1437

Query: 164  VIGKVEAADGD 174
             +  V A D D
Sbjct: 1438 SVISVTARDPD 1448


>gi|82659759|gb|ABB88946.1| Fat4 [Mus musculus]
          Length = 4981

 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 76/269 (28%), Positives = 120/269 (44%), Gaps = 42/269 (15%)

Query: 2    INEDD-----FLQPITLV---VRAIQYDNQDRYALATLIVSKAG--TSLREL-------- 43
            + EDD     FL  +T V    RA+ Y+ Q  Y L        G  T++R          
Sbjct: 1880 VEEDDGDGVFFLNLVTGVFNLTRALDYETQQYYILTVRAEDGGGQSTTIRAYFNILDVND 1939

Query: 44   ---QFSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWL-SNDYGERFSISRQGD 96
                FS + YS S +ENLP+   +L        D    ++ Y + S D   +F++ + G 
Sbjct: 1940 NPPVFSMSSYSTSLMENLPLGSTVLVFNVTDADDGVNSQLSYSIASGDSLGQFAVDKHGV 1999

Query: 97   ISLMQCLDYETEDSYRFTVYATD------TLMTTSATVNISVVNVNDWDPRFRYPQYELF 150
            +  ++ LD E++  Y   +   D      +  T++A V+I +++VND  P F  P+    
Sbjct: 2000 LKTLKALDRESQSFYNLVIQVHDLPQPPTSRFTSTAQVSIILLDVNDNPPMFLSPK---- 2055

Query: 151  LPHIPLADLTP-GSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIND-SGHISIV-DLS 205
            L +IP  + TP  +V+ K +A D D G    +  +L  P    FSI    G + +  +L 
Sbjct: 2056 LTYIP--ENTPIDTVVFKAQATDPDSGPNSYIEYTLLNPSGNKFSIGTIDGEVHLTGELD 2113

Query: 206  ALNTSTIQLVVVATDTGNPPRQASVPAIM 234
                S   L VVATD G PP  +S   ++
Sbjct: 2114 REEVSNYSLTVVATDKGQPPLSSSTEVVV 2142



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 61/192 (31%), Positives = 91/192 (47%), Gaps = 24/192 (12%)

Query: 50   YSVSALENLPVNYVLLTVTTNKPRDLRV----KYWLSNDYGERFSIS-RQGDISLMQCLD 104
            +S    EN P+ Y +  VTT+   D+ +    +Y +  D    F+I+   GDI + + L+
Sbjct: 2779 FSAYVSENSPLGYTVTRVTTSD-EDIGINAISRYSIV-DTSLPFTINPNTGDIVISRPLN 2836

Query: 105  YETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSV 164
             E  D YR  V A D+  T S  V I V ++ND  PRF  P Y L  P +P      GS 
Sbjct: 2837 REDTDRYRIRVSAHDSGWTVSTDVTIFVTDINDNTPRFSRPSYYLDCPELPEL----GSR 2892

Query: 165  IGKVEAADGDKGD--RVTLSLRGPYEKMFSIN-DSGHI---------SIVDLSALNTSTI 212
            + +V A D D+G   +V   ++   E  F IN  +G I         ++   S +N +  
Sbjct: 2893 VTQVSATDPDEGSNGQVFYFIKSQSE-YFRINATTGEIFNKQVLKYQNVSGFSNVNINRH 2951

Query: 213  QLVVVATDTGNP 224
              +V A+D GNP
Sbjct: 2952 SFIVTASDRGNP 2963



 Score = 58.2 bits (139), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 35/101 (34%), Positives = 49/101 (48%), Gaps = 5/101 (4%)

Query: 77   VKYWLSNDYGERFSIS-RQGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNV 135
            V Y L +   + F I    GD+   + LD E    Y   V A D L ++   +NI++ +V
Sbjct: 1775 VTYALISGADDSFRIDPESGDLIATKRLDREHRSKYSLLVRADDGLQSSDMRINITISDV 1834

Query: 136  NDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG 176
            ND  PRF  P Y   +P     D TPGS++  + A D D G
Sbjct: 1835 NDHTPRFSRPVYSFDIPE----DTTPGSLVAAILATDDDSG 1871



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 55/187 (29%), Positives = 88/187 (47%), Gaps = 16/187 (8%)

Query: 56   ENLPVNYVLLTVTTNKPR---DLRVKYWLSNDYGERFSISR-QGDISLMQCLDYETEDSY 111
            EN P++ V+       P    +  ++Y L N  G +FSI    G++ L   LD E   +Y
Sbjct: 2061 ENTPIDTVVFKAQATDPDSGPNSYIEYTLLNPSGNKFSIGTIDGEVHLTGELDREEVSNY 2120

Query: 112  RFTVYATDTL---MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKV 168
              TV ATD     +++S  V + V+++ND +P F    Y + +      ++  G+ I +V
Sbjct: 2121 SLTVVATDKGQPPLSSSTEVVVMVLDINDNNPVFAQAMYRVQIKE----NILTGTDIIQV 2176

Query: 169  EAADGDKGDRVTLS---LRGPYEKMFSIND-SGHISIV-DLSALNTSTIQLVVVATDTGN 223
             AAD D+G    +    + G   + F I+  +G I++   L    T    L V ATD G+
Sbjct: 2177 SAADNDEGTNGQVRYGIVGGNTHQEFRIDSVTGAITVAKSLDRETTPAYTLTVQATDRGS 2236

Query: 224  PPRQASV 230
             PR  S 
Sbjct: 2237 SPRTDSC 2243



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 57/189 (30%), Positives = 94/189 (49%), Gaps = 15/189 (7%)

Query: 56   ENLPVNYVLLTVTTNKPRDLRVKYWL-SNDYGERFSISR-QGDISLMQCLDYETEDSYRF 113
            EN PV  ++ T+T +  R   + Y++ S + G+ F I    G +S+ Q LD+E    Y  
Sbjct: 2580 ENQPVGTLVTTITGSSLRGETLSYYIASGNLGDTFQIDPLTGQVSISQPLDFEKIQKYVV 2639

Query: 114  TVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEA 170
             + A D      ++   ++I+V+++ND  P F   + + F+  I L +L+P  ++  V A
Sbjct: 2640 WIEARDGGFPPFSSYEKLDITVLDINDNAPTF---EEDPFVSEI-LENLSPRKIL-TVSA 2694

Query: 171  ADGDKGDRVTLS---LRGPYEKMFSINDS-GHI-SIVDLSALNTSTIQLVVVATDTGNPP 225
             D D G    L    + G  E  F+IN + G I SI  L     S  +L V ++D G+P 
Sbjct: 2695 TDKDSGPNGQLDYEIVNGNQESSFTINHATGEIRSIRPLDREKISHYELTVKSSDKGSPS 2754

Query: 226  RQASVPAIM 234
            +  SV  I+
Sbjct: 2755 QSTSVKVII 2763



 Score = 54.7 bits (130), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 49/192 (25%), Positives = 96/192 (50%), Gaps = 10/192 (5%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVT-TNKPRDLRVKYWLS-NDYGERFSISR-QGDISLMQ 101
           FS+  YS    EN+ + Y + +V+ T    +  + Y ++  D    F+++   G ++   
Sbjct: 793 FSQAAYSFVVFENVALGYHVGSVSATTMDLNANISYLITTGDQRGMFAMNPVTGQLTTAS 852

Query: 102 CLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTP 161
            +D E +  Y+  + A+   +T    VNI+V ++ND  P F      +      + +   
Sbjct: 853 VIDREEQSFYQLKIVASGGAVTGDTVVNITVKDLNDNAPHFLQAVESINA----VENWQA 908

Query: 162 GSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIND-SGHISIVDLSALNTSTIQLVVVA 218
           G  I + +A D D+G   RV  SL+   + +F+IN+ +G+IS++    ++  + Q+ +VA
Sbjct: 909 GHSIFQAKAVDPDEGVNGRVLYSLKQNPKNLFTINEQNGNISLLGALDVHAGSYQVEIVA 968

Query: 219 TDTGNPPRQASV 230
           +D G P   +S+
Sbjct: 969 SDMGVPQLSSSI 980



 Score = 51.6 bits (122), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 73/237 (30%), Positives = 107/237 (45%), Gaps = 22/237 (9%)

Query: 11  ITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNE-YSVSALENLPVNYVLLTVTT 69
           I L + A       + + A L+V+    +  +  FS+ E Y VS +EN P    LL +  
Sbjct: 548 IVLNISARDQGVHPKVSYAQLVVTVLDVNDEKPVFSQPEGYEVSVVENAPTGTELLVLGA 607

Query: 70  NKPRDL----RVKYWLSNDYGER--FSISR-QGDISLMQCLDYETEDSYRFTVYATD--- 119
              RDL     V++ L     ++  F +    G +S    LD E +  Y  ++ ATD   
Sbjct: 608 TD-RDLGDNGTVRFSLQEAENDQRLFRLDPVSGRLSTASSLDREEQAFYCLSILATDLGS 666

Query: 120 TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRV 179
              +++A VN+S++++ND  P F   QY     HI   +   GS +  V A D D G   
Sbjct: 667 PPQSSTAQVNVSLLDINDNSPVFYPVQY---FAHI-QENEPGGSYVTTVSATDPDMGPNG 722

Query: 180 TL--SLRGPYEKMFSIN-DSGHISI-VDLSALNTSTIQLVVVATDTGN--PPRQASV 230
           T+  S+       F I+  SG IS  + L     +  QL VVATD GN   P QA V
Sbjct: 723 TVKYSISAGDRSRFQIHAKSGVISTKMALDREEKTAYQLQVVATDGGNLQSPNQAIV 779



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 43/139 (30%), Positives = 65/139 (46%), Gaps = 11/139 (7%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSN-DYGERFSISRQGDISLM 100
            F +  Y V+  E+ PVN     V     +   +  + Y +++ + G+ F I   G + + 
Sbjct: 996  FDQISYEVTLSESEPVNSRFFKVQASDKDSGANGEIAYTITDGNNGDAFGIFPDGQLYIK 1055

Query: 101  QCLDYETEDSYRFTVYATDTLMTT-SATVNISVV--NVNDWDPRFRYPQYELFLPHIPLA 157
              LD E +D Y   V A+D  +   SATVN++V+  +VND  P F    Y  +      A
Sbjct: 1056 SELDRELQDRYVLLVVASDRAVEPLSATVNVTVLLEDVNDNRPLFNSTNYTFYFEEEQRA 1115

Query: 158  DLTPGSVIGKVEAADGDKG 176
                GS +GKV A D D G
Sbjct: 1116 ----GSFVGKVSAVDKDFG 1130



 Score = 47.4 bits (111), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 44/164 (26%), Positives = 82/164 (50%), Gaps = 13/164 (7%)

Query: 81   LSNDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDTL---MTTSATVNISVVNVN 136
            L  +   +F+I S  G ++L+  LDYE   +Y   + A D+    + ++ T++I +++ N
Sbjct: 1250 LKGNEERQFAIDSFSGQVTLVGKLDYEATSAYSLLIQAVDSGAIPLNSTCTLSIDILDEN 1309

Query: 137  DWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTL--SLRGPY-EKMFSI 193
            D  P F  P+  LF+    L ++  G ++  V A D D G    L  ++ G      FSI
Sbjct: 1310 DNTPSF--PKSTLFVD--VLENMRIGELVSSVTATDSDSGVNADLHYTITGSNNHGTFSI 1365

Query: 194  N-DSGHISIVDLSALNTSTI-QLVVVATDTGNPPRQASVPAIMH 235
            + ++G I +       T ++ +L + A D G PPR +++  ++ 
Sbjct: 1366 SPNTGSIFLAKKLDFETQSLYKLNITAKDQGRPPRSSTMSVVIQ 1409



 Score = 43.9 bits (102), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 42/143 (29%), Positives = 71/143 (49%), Gaps = 16/143 (11%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLS------NDYGERFSI-SRQGD 96
            +FS+N  S +  E+  +  V+ TV+  + RD  +   +S      N+ G  F+I S  G 
Sbjct: 3090 EFSQNHISATIPESHSIGSVVRTVSA-RDRDTAMNGLISYNIISGNEEG-IFAINSSTGV 3147

Query: 97   ISLMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
            ++L + LDYE    +  T+ ATD      T   ++ +SV++VND  P F  P  + F P 
Sbjct: 3148 VTLAKALDYEMSSKHEMTISATDGGWVARTGYCSLTVSVIDVNDNSPVF-VP--DEFFPT 3204

Query: 154  IPLADLTPGSVIGKVEAADGDKG 176
            + + +   G+ +  + A D D G
Sbjct: 3205 V-MENAPSGTTVIHLNATDADSG 3226



 Score = 42.0 bits (97), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 46/149 (30%), Positives = 70/149 (46%), Gaps = 12/149 (8%)

Query: 95   GDISLMQCLDYETEDSYRFTVYATDT----LMTTSATVNISVVNVNDWDPRFRYPQYELF 150
            G I     LD ET+D+Y   V A+D      +++S +V +++ +VND  PRF   Q+  +
Sbjct: 2417 GQIITSALLDRETKDNYTLVVVASDAGSPESLSSSTSVLVTITDVNDNPPRF---QHHPY 2473

Query: 151  LPHIPLADLTPGSVIGKVEAADGDKGDRVTL--SLRGPYEKMFSINDSGHISIVDLSALN 208
            + HIP +   PGS +  V   D D G    L  SL G   + F I D    +I+    L+
Sbjct: 2474 VTHIP-SPTPPGSFVFAVTVTDADIGSNSELHYSLSGRNSEKFHI-DPLRGAIMAAGPLS 2531

Query: 209  -TSTIQLVVVATDTGNPPRQASVPAIMHF 236
              S +   V   D G+ P+  S    + F
Sbjct: 2532 GASEVTFSVHVKDGGSFPKTDSTTVTVRF 2560



 Score = 41.6 bits (96), Expect = 0.74,   Method: Compositional matrix adjust.
 Identities = 53/211 (25%), Positives = 89/211 (42%), Gaps = 16/211 (7%)

Query: 25   RYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWL 81
            R    +L VS    +     F  +E+  + +EN P    ++ +     +   +  + Y +
Sbjct: 3176 RTGYCSLTVSVIDVNDNSPVFVPDEFFPTVMENAPSGTTVIHLNATDADSGANAVIAYTV 3235

Query: 82   SNDYGERFSIS-RQGDISLMQCLDYETEDSYRFTVYA---TDTLMTTSATVNISVVNVND 137
             +   + F I    G I+    LD+ET+ SY  TV A    D    + ATV+I +   N+
Sbjct: 3236 QSSDSDLFVIDPNMGVITTQGFLDFETKQSYHLTVKAFNVPDEEKCSFATVDIQLKGTNE 3295

Query: 138  WDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAAD---GDKGDRVTLSLRGPYEKMFSIN 194
            + PRF    Y   +        + G+ +G+V A+D   G  G+   L      +K F IN
Sbjct: 3296 YVPRFVSKLYYFEVSEA----ASRGTAVGEVFASDRDMGADGEVHYLIFGNSRKKGFQIN 3351

Query: 195  D-SGHISIVD-LSALNTSTIQLVVVATDTGN 223
              +G I +   L       + L V+A + GN
Sbjct: 3352 KMTGQIYVSGLLDREKEERVSLKVLAKNFGN 3382



 Score = 40.8 bits (94), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 38/135 (28%), Positives = 64/135 (47%), Gaps = 8/135 (5%)

Query: 89   FSISRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYP 145
            FS+S  G +S  + +D E    +  +V   D+    M+++ TV+I+V++ ND   + R  
Sbjct: 3560 FSLSTAGVLSTTREIDREQIADFYLSVVTRDSGAPQMSSTGTVHITVLDQNDNPSQSR-- 3617

Query: 146  QYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSGHISIVDLS 205
              E+F+ +    +L PG  +G V+  D D  D    SL      +FSI  +G   +    
Sbjct: 3618 TVEIFVNY--YGNLFPGGTLGSVKPQDPDVLDSFHCSLTSGVTSLFSI-PAGSCDLSSQP 3674

Query: 206  ALNTSTIQLVVVATD 220
                 T  L VV++D
Sbjct: 3675 RSTDGTFDLTVVSSD 3689



 Score = 39.3 bits (90), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 77/167 (46%), Gaps = 24/167 (14%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKP-----RDLRVKYWLSNDYGERFSIS-RQGDIS 98
            F K+   V  LEN+ +  ++ +VT          DL      SN++G  FSIS   G I 
Sbjct: 1315 FPKSTLFVDVLENMRIGELVSSVTATDSDSGVNADLHYTITGSNNHGT-FSISPNTGSIF 1373

Query: 99   LMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELF---LP 152
            L + LD+ET+  Y+  + A D      +++ +V I V + ND  P F  P  ++F   + 
Sbjct: 1374 LAKKLDFETQSLYKLNITAKDQGRPPRSSTMSVVIQVRDFNDNPPSF--PPGDIFKSIVE 1431

Query: 153  HIPLADLTPGSVIGKVEAADGDKGDRVTLSL----RGPYEKMFSIND 195
            +IPL     G+ +  V A D D      LS     + P    FSI++
Sbjct: 1432 NIPL-----GTSVISVTAHDPDADINGQLSYAIIQQMPRGNHFSIDE 1473



 Score = 39.3 bits (90), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 56/208 (26%), Positives = 91/208 (43%), Gaps = 23/208 (11%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGERFSISRQ-GDISLM 100
           F  + Y     E+  V   +L V     ++  +  ++Y L  D G  F +  + G I++ 
Sbjct: 250 FGSSHYQAGVPEDAVVGSSVLQVAAADADEGTNADIRYRL-QDEGTPFQMDPETGLITVR 308

Query: 101 QCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDP--RFRY-PQYELFLPHI 154
           + LD+E    Y  TV ATD     +T  A   I +++VND DP  +FRY P    +    
Sbjct: 309 EPLDFEARRQYSLTVQATDRGVPSLTGRAEAFIQLLDVNDNDPVVKFRYFPATSRYASVD 368

Query: 155 PLADLTPGSVIGKVEAADGDK----GDRVTLSLRGPYEKMFSINDSG--HISIVDL-SAL 207
             A +  G+V+  +   D D     G+     L G  ++ F +  S   ++S++ + SAL
Sbjct: 369 ENAQV--GTVVALLTVTDADSPAANGNISVQILGGNEQRHFEVQRSKVPNLSLIKVASAL 426

Query: 208 NTSTI---QLVVVATDTGNPPRQASVPA 232
           +   I    L V  +D    P  A V A
Sbjct: 427 DRERIPSYNLTVSVSDNSGAPPTAEVQA 454


>gi|344277382|ref|XP_003410481.1| PREDICTED: protocadherin Fat 4 [Loxodonta africana]
          Length = 4980

 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 76/270 (28%), Positives = 122/270 (45%), Gaps = 44/270 (16%)

Query: 2    INEDD-----FLQPITLV---VRAIQYDNQDRYALATLIVSKAGTSLRELQ--------- 44
            +NEDD     FL P+T V    R + Y+ Q  Y L T+     G     ++         
Sbjct: 1880 VNEDDEDGIFFLNPVTGVFNLTRVLDYEAQQYYIL-TVRAEDGGGQFTTIRVYFNVLDVN 1938

Query: 45   -----FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWL-SNDYGERFSISRQG 95
                 FS N YS S +E LP+   +L        D    ++ Y + S D   +F++ + G
Sbjct: 1939 DNPPIFSLNSYSTSLMETLPLGSTVLVFNVTDADDGINSQLAYSIASGDSLGQFTVDQNG 1998

Query: 96   DISLMQCLDYETEDSYRFTVYATD------TLMTTSATVNISVVNVNDWDPRFRYPQYEL 149
             + +++ LD E++  Y   V   D      +  T++A V+I +++VND  P F  P+   
Sbjct: 1999 VLKVLKALDRESQSFYNLVVQVHDLPQLPASRYTSTAQVSIILLDVNDNPPTFLSPK--- 2055

Query: 150  FLPHIPLADLTP-GSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIND-SGHISIV-DL 204
             L +IP  + TP  +V+ K +A D D G    +  +L  P    FSI    G + +  +L
Sbjct: 2056 -LTYIP--ENTPIDTVVFKAQATDPDSGPNSYIEYTLLNPLGNKFSIGTIDGEVRLTGEL 2112

Query: 205  SALNTSTIQLVVVATDTGNPPRQASVPAIM 234
               + S   L+VVATD G P   +S   ++
Sbjct: 2113 DREDVSNYTLMVVATDKGQPSLSSSTEVVV 2142



 Score = 58.5 bits (140), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 65/225 (28%), Positives = 102/225 (45%), Gaps = 39/225 (17%)

Query: 45   FSKNEYSVSALENL---PVNYV-LLTVTTNKPRDLRVKYWL-SNDYGERFSISRQGDISL 99
            F  + YSV+  ENL   P   + +L    ++  + ++ Y L   +    F++S  G++ +
Sbjct: 2259 FELSPYSVNVPENLGTLPSTILQVLARDDDQGSNSQISYVLFGGNEDNAFTLSASGELRV 2318

Query: 100  MQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
             Q LD ET++ +  TV ATD+    +T + T+NI V +VND  P F   +Y   +P    
Sbjct: 2319 TQSLDRETKEHFVLTVTATDSGSPALTGTGTINIIVDDVNDNVPTFASKRYFTTIPE--- 2375

Query: 157  ADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDS-GHI---SIVDLSALNTSTI 212
             D   G+ +  V A+D D      + + G     F+IN S G I   +++D  A    T 
Sbjct: 2376 -DAPTGTDVLLVNASDADASTNAVIRIIGG-NSQFTINPSTGQIITSALLDREAKENYT- 2432

Query: 213  QLVVVATDTG--------------------NPPRQASVPAIMHFP 237
             LVVV++D G                    NPPR    P + H P
Sbjct: 2433 -LVVVSSDAGSPEPLSSSTSVLVTVTDVNDNPPRFQHHPYVTHIP 2476



 Score = 58.5 bits (140), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 62/192 (32%), Positives = 92/192 (47%), Gaps = 24/192 (12%)

Query: 50   YSVSALENLPVNYVLLTVTTNKPRDLRV----KYWLSNDYGERFSIS-RQGDISLMQCLD 104
            +S    EN P+ Y +  VTT+   D+ V    +Y +  D    F+I+   GDI + + L+
Sbjct: 2777 FSAHVPENSPLGYTVTRVTTSD-EDVGVNAISRYSIM-DTSLPFTINPSTGDIVISRPLN 2834

Query: 105  YETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSV 164
             E  D YR  V A D+  T S  V I V +VND  PRF  P Y L  P   L ++  GS 
Sbjct: 2835 REDTDLYRIRVSAHDSGWTVSTDVTIFVTDVNDNAPRFSRPSYYLDCPE--LTEI--GSK 2890

Query: 165  IGKVEAADGDKGD--RVTLSLRGPYEKMFSIN-DSGHI---------SIVDLSALNTSTI 212
            + +V A D D+G   +V   ++   E  F IN  +G I         ++   S +N +  
Sbjct: 2891 VTQVSATDPDEGSNGQVFYFIKSQSE-YFRINATTGEIFNKQVLKYQNVSGFSNVNINRH 2949

Query: 213  QLVVVATDTGNP 224
              +V ++D GNP
Sbjct: 2950 SFIVTSSDRGNP 2961



 Score = 58.2 bits (139), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 47/158 (29%), Positives = 82/158 (51%), Gaps = 13/158 (8%)

Query: 87   ERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRF 142
             +F+I S  G ++L+  LDYE   +Y   + A D+    + ++ T+NI +++ ND  P F
Sbjct: 1256 RQFAIDSTSGQVTLIGKLDYEATPAYSLVIQAVDSGTVSLNSTCTLNIDILDENDNTPSF 1315

Query: 143  RYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTL--SLRGPY-EKMFSIN-DSGH 198
              P+  LF+    L ++  G ++  V A D D GD   L  S+ G      FSI+ ++G 
Sbjct: 1316 --PKSTLFVD--VLENMRIGELVSSVTATDSDSGDNADLHYSISGTNNHGTFSISPNTGS 1371

Query: 199  ISIVDLSALNTSTI-QLVVVATDTGNPPRQASVPAIMH 235
            I +       T ++ +L + A D G PPR +++  ++H
Sbjct: 1372 IFLAKKLDFETQSLYKLNITAKDQGRPPRSSTMSVVIH 1409



 Score = 55.8 bits (133), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 33/101 (32%), Positives = 49/101 (48%), Gaps = 5/101 (4%)

Query: 77   VKYWLSNDYGERFSIS-RQGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNV 135
            V Y + +   + F I    GD+   + LD E    Y   V A D L ++   +NI++ +V
Sbjct: 1775 VTYAIISGADDSFRIDPESGDLIATKRLDRERRSKYSLLVRADDGLQSSDMRINITISDV 1834

Query: 136  NDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG 176
            ND  P+F  P Y   +P     D TPGS++  + A D D G
Sbjct: 1835 NDHTPKFSRPVYSFDIPE----DTTPGSLVAAILATDDDSG 1871



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 56/183 (30%), Positives = 88/183 (48%), Gaps = 16/183 (8%)

Query: 56   ENLPVNYVLLTVTTNKPR---DLRVKYWLSNDYGERFSISR-QGDISLMQCLDYETEDSY 111
            EN P++ V+       P    +  ++Y L N  G +FSI    G++ L   LD E   +Y
Sbjct: 2061 ENTPIDTVVFKAQATDPDSGPNSYIEYTLLNPLGNKFSIGTIDGEVRLTGELDREDVSNY 2120

Query: 112  RFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKV 168
               V ATD     +++S  V + V+++ND +P F    Y++ +    L     G+ I +V
Sbjct: 2121 TLMVVATDKGQPSLSSSTEVVVMVLDINDNNPIFAQALYKVEINENTLT----GTDIIQV 2176

Query: 169  EAADGDKGDRVTLS---LRGPYEKMFSIND-SGHISIVD-LSALNTSTIQLVVVATDTGN 223
             AADGD+G    +    + G   + F I+  +G I++   L    T T  L V ATD G+
Sbjct: 2177 YAADGDEGTNGQVRYGIVGGNVNQEFRIDSVTGTITVAKPLDREKTPTYFLTVQATDRGS 2236

Query: 224  PPR 226
             PR
Sbjct: 2237 TPR 2239



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 57/190 (30%), Positives = 92/190 (48%), Gaps = 15/190 (7%)

Query: 56   ENLPVNYVLLTVTTNKPRDLRVKYWL-SNDYGERFSISR-QGDISLMQCLDYETEDSYRF 113
            EN PV  ++ T+T    R   + Y++ S + G  F I    G +S+ + LD+E    Y  
Sbjct: 2578 ENQPVGSLVTTITGTSSRGEPLSYYIASGNLGNTFQIDPLTGQVSISRPLDFEKIQKYVV 2637

Query: 114  TVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEA 170
             + A D      ++   ++I+V++VND  P F+    + F+  I L +L+P  ++  V A
Sbjct: 2638 WIEARDGGFPPFSSYEKLDITVLDVNDNSPIFK---EDPFVSEI-LENLSPQKIL-TVSA 2692

Query: 171  ADGDKGDRVTLS---LRGPYEKMFSINDS-GHI-SIVDLSALNTSTIQLVVVATDTGNPP 225
             D D G    L    + G  E  FSIN + G I SI  L     S   L + ++D G+P 
Sbjct: 2693 MDKDSGPNGQLDYEIVNGNQENSFSINHATGEIRSIRPLDREKVSQYILTIKSSDKGSPS 2752

Query: 226  RQASVPAIMH 235
            +  SV  I++
Sbjct: 2753 QSTSVKVIIN 2762



 Score = 52.4 bits (124), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 49/187 (26%), Positives = 95/187 (50%), Gaps = 12/187 (6%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRDLR--VKYWLS-NDYGERFSISR-QGDISLM 100
           FS+  YS    EN+ + Y + +V+ +   DL   + Y ++  D    F+I++  G ++  
Sbjct: 793 FSQAAYSFVVFENVALGYHVGSVSAST-MDLNSNISYLITTGDQKGMFAINQVTGQLTTA 851

Query: 101 QCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLT 160
             +D E +  Y+  V A+   +T    VNI+V ++ND  P F      + +    + +  
Sbjct: 852 SVVDREEQSFYQLKVVASGGTVTGDTVVNITVKDLNDNSPHFLQAVESVNV----VENWQ 907

Query: 161 PGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIND-SGHISIVDLSALNTSTIQLVVV 217
            G  I + +A D D+G    V  SL+   + +F+IN+ +G+IS++    ++  + Q+ ++
Sbjct: 908 AGHSIFQAKAVDPDEGVNGMVLYSLKQNPKNLFAINEKNGNISLLGSLDVHAGSYQIEIL 967

Query: 218 ATDTGNP 224
           A+D G P
Sbjct: 968 ASDMGVP 974



 Score = 51.6 bits (122), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 57/198 (28%), Positives = 87/198 (43%), Gaps = 24/198 (12%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLS-NDYGERFSISRQGDISLM 100
            F +  Y V+  E+ PVN     V     +   +  V Y ++  + G+ F +   G + + 
Sbjct: 996  FDQLSYEVTLSESEPVNSRFFKVQASDKDSGANGEVAYSIAEGNAGDAFGVFPDGQLYIK 1055

Query: 101  QCLDYETEDSYRFTVYATDTLMTT-SATVNISVV--NVNDWDPRFRYPQYELFLPHIPLA 157
              LD E +D Y   V A+D  +   SATVN++V+  +VND  P F    Y  +      A
Sbjct: 1056 SELDRELQDRYVLLVVASDRAVEPLSATVNVTVILEDVNDNRPLFNSTNYTFYFEEEQRA 1115

Query: 158  DLTPGSVIGKVEAADGDKGD----RVTLSLRGPYEKMFSINDSGHIS---IVDLSAL--- 207
                GS +GKV A D D G     R +     P  ++ ++  SG I+     D  +L   
Sbjct: 1116 ----GSFVGKVNAVDKDFGPNGEVRYSFERVQPDFELHAV--SGKITNTHQFDRESLMRR 1169

Query: 208  -NTSTIQLVVVATDTGNP 224
              T+     V+ATD G P
Sbjct: 1170 RGTAVFSFTVIATDQGLP 1187



 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 74/244 (30%), Positives = 104/244 (42%), Gaps = 36/244 (14%)

Query: 11  ITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSK-NEYSVSALENLPVNYVLLTVTT 69
           I L + A  +    + + A L+V+    +  +  FS+   Y VS +EN P    LL +  
Sbjct: 548 IVLNISARDHGVHPKVSYAQLVVTLLDVNDEKPVFSQPGGYDVSVVENAPTGTELLVLGA 607

Query: 70  NKPRDLRVKYWLSNDYGE-RFSISR-------------QGDISLMQCLDYETEDSYRFTV 115
              RDL        D G  RFS+                G +S +  LD E +  Y   V
Sbjct: 608 TD-RDL-------GDNGTVRFSLQEAETVQKSFRLDPVSGRLSTISSLDREEQAFYSLLV 659

Query: 116 YATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAAD 172
            ATD      ++ A +N+S++++ND  P F   QY     HI   +   GS I  V A D
Sbjct: 660 LATDLGSPPQSSMARINVSLLDMNDNSPVFYPVQY---FAHI-QENEPGGSYITTVSATD 715

Query: 173 GDKGDRVTL--SLRGPYEKMFSIN-DSGHISI-VDLSALNTSTIQLVVVATDTGN--PPR 226
            D G   T+  S+       F +N  SG IS  + L     +  QL +VATD GN   P 
Sbjct: 716 PDLGPNGTVKYSISAGDRSRFQVNAQSGVISTRMALDREEKTAYQLQIVATDGGNLQSPN 775

Query: 227 QASV 230
           QA V
Sbjct: 776 QAIV 779



 Score = 47.8 bits (112), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 75/161 (46%), Gaps = 16/161 (9%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGERFSIS-RQGDISLM 100
            F+ +EY  + LEN P    ++ +     +   +  + Y + +   + F I    G I+  
Sbjct: 3194 FTPDEYFPTVLENAPSGTTVIHLNATDADSGTNAVIAYTVQSSDSDLFVIDPNTGIITTQ 3253

Query: 101  QCLDYETEDSYRFTVYA---TDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLA 157
              LD+ET+ SY  TV A    D    + ATVNI +   N++ PRF    Y     +  ++
Sbjct: 3254 GFLDFETKQSYHLTVKAFNVPDEERCSFATVNIQLKGTNEYVPRFVSKLY-----YFEIS 3308

Query: 158  DLTP-GSVIGKVEAAD---GDKGDRVTLSLRGPYEKMFSIN 194
            +  P G+++G+V A+D   G  G+   L      +K F IN
Sbjct: 3309 EAAPKGTIVGEVFASDRDLGTDGEVHYLIFGSSRKKGFQIN 3349



 Score = 44.7 bits (104), Expect = 0.075,   Method: Compositional matrix adjust.
 Identities = 41/148 (27%), Positives = 73/148 (49%), Gaps = 14/148 (9%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLR----VKYWLSN-DYGERFSI-SRQGDI 97
            +FS++  S +  E+  +  ++ TV+  + RD      ++Y +S+ + G  F+I S  G +
Sbjct: 3088 EFSQSHMSATIPESHSIGAIVRTVSA-RDRDAAMNGLIRYGISSGNEGGVFAINSSTGVL 3146

Query: 98   SLMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHI 154
             L + LDYE    +  T+ ATD      T   TV ++V++VND  P F   +Y    P +
Sbjct: 3147 ILAKALDYEQCQKHEMTISATDGGWVARTGYCTVTVNVIDVNDNSPVFTPDEY---FPTV 3203

Query: 155  PLADLTPGSVIGKVEAADGDKGDRVTLS 182
             L +   G+ +  + A D D G    ++
Sbjct: 3204 -LENAPSGTTVIHLNATDADSGTNAVIA 3230



 Score = 44.3 bits (103), Expect = 0.094,   Method: Compositional matrix adjust.
 Identities = 44/149 (29%), Positives = 69/149 (46%), Gaps = 12/149 (8%)

Query: 95   GDISLMQCLDYETEDSYRFTVYATDTL----MTTSATVNISVVNVNDWDPRFRYPQYELF 150
            G I     LD E +++Y   V ++D      +++S +V ++V +VND  PRF   Q+  +
Sbjct: 2415 GQIITSALLDREAKENYTLVVVSSDAGSPEPLSSSTSVLVTVTDVNDNPPRF---QHHPY 2471

Query: 151  LPHIPLADLTPGSVIGKVEAADGDKGDRVTL--SLRGPYEKMFSINDSGHISIVDLSALN 208
            + HIP +   PGS +  V   D D G    L  SL G   + F I D    +I+    L+
Sbjct: 2472 VTHIP-SPTPPGSFVFAVTVTDADIGANSELYYSLSGRNSEKFHI-DPLRGAIMAAGPLH 2529

Query: 209  -TSTIQLVVVATDTGNPPRQASVPAIMHF 236
              S +   V   D G+ P+  S    + F
Sbjct: 2530 GASEVTFSVHVKDGGSFPKADSTTVTVRF 2558



 Score = 38.1 bits (87), Expect = 7.5,   Method: Compositional matrix adjust.
 Identities = 35/135 (25%), Positives = 63/135 (46%), Gaps = 8/135 (5%)

Query: 89   FSISRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYP 145
            FS++  G +S  + +D E    +  +V   D+    M+++ TV+I+V++ ND   + R  
Sbjct: 3558 FSLNTAGVLSTTREIDREQIADFYLSVVTRDSGVPQMSSTGTVHITVIDQNDNPSQSR-- 3615

Query: 146  QYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSGHISIVDLS 205
              E+F+ +    +L PG ++G V+  D D  D    S       +FSI   G   +   +
Sbjct: 3616 TVEIFVNY--YGNLFPGGILGSVKPQDPDVLDSFHCSFASGVTNLFSI-PGGTCDLNSQA 3672

Query: 206  ALNTSTIQLVVVATD 220
                 T  L V++ D
Sbjct: 3673 RSTDGTFDLTVLSND 3687


>gi|297295324|ref|XP_002804588.1| PREDICTED: protein dachsous-like [Macaca mulatta]
          Length = 2233

 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 65/230 (28%), Positives = 104/230 (45%), Gaps = 22/230 (9%)

Query: 13   LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKP 72
            LV+ A+   N  R   A L VS    +     F ++ Y +S LE+ P   VL+ +  + P
Sbjct: 1067 LVLIAVDGGNPPRSGTAELRVSVLDVNDNAPAFQQSSYRISVLESAPAGMVLIQLNASDP 1126

Query: 73   RDL----RVKYWLSNDYGER----FSIS-RQGDISLMQCLDYETEDSYRFTVYATD---T 120
             DL     V ++ S    +R    FS+    G ++L+  LD+E+E+ Y F V A D    
Sbjct: 1127 -DLGPSGNVTFYFSGHTPDRVRNLFSLHPTTGKLTLLGPLDFESENYYEFDVRARDGGSP 1185

Query: 121  LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVT 180
             M    ++ + +++VND  P          LP        PG+V+  +   D D G    
Sbjct: 1186 AMEQHCSLRVDLLDVNDNAPYITVTSELGTLPE----SAEPGTVVALISVQDPDSGSNGD 1241

Query: 181  LSLRGPYEKMFSINDS--GHISIVDLSALN---TSTIQLVVVATDTGNPP 225
            +SLR P    F++  +     S+V    L+    S+  ++V A+D GNPP
Sbjct: 1242 VSLRIPDHLPFALKSAFRNQFSLVTAGPLDREAKSSYDIMVTASDAGNPP 1291



 Score = 48.1 bits (113), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 59/204 (28%), Positives = 94/204 (46%), Gaps = 28/204 (13%)

Query: 44  QFSKNEYSVSALEN-LPVNYVL-LTV-TTNKPRDLRVKYWL------SNDYGERFSISR- 93
           Q S++ Y V   EN LP   +L L+V   + P++ R+ ++L      +   G  F+I+R 
Sbjct: 456 QSSQSSYDVYIEENNLPGAPILNLSVWDPDAPQNARLSFFLLEQGAETGLVGRYFTINRD 515

Query: 94  QGDISLMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELF 150
            G +S +  LDYE    +  T + +D    ++ T+ +VNI V + ND  P+  YP+    
Sbjct: 516 NGIVSSLVPLDYEDRREFELTAHISDGGTPVLATNISVNIFVTDRNDNAPQVLYPR---- 571

Query: 151 LPHIPLADLTP-----GSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-DSGHISI 201
            P     ++ P     G ++ +V   D D G    LS   L  P + +F+I   +G IS 
Sbjct: 572 -PGGSSVEMLPRGTSAGHLVSRVVGWDADAGHNAWLSYSLLGAPNQSLFAIGLHTGQIST 630

Query: 202 VDLSALNTSTIQ-LVVVATDTGNP 224
                   S  Q L V+  D G P
Sbjct: 631 ARPVQDTDSPRQTLTVLIKDNGEP 654



 Score = 46.6 bits (109), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 43/167 (25%), Positives = 75/167 (44%), Gaps = 23/167 (13%)

Query: 77   VKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVV 133
            + + L + +  +FS+   G       LD E + SY   V A+D     ++T  T+ +++ 
Sbjct: 1250 LPFALKSAFRNQFSLVTAGP------LDREAKSSYDIMVTASDAGNPPLSTHRTIFLNIS 1303

Query: 134  NVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSI 193
            +VND  P F    +E+F+P     +  PG ++  + A+D D G    +S      +   +
Sbjct: 1304 DVNDNPPSFFQRSHEVFVPE----NNRPGDLLCSLAASDPDSGLNALISYSLLEPRNRDV 1359

Query: 194  NDSGHISIVDLSAL----------NTSTIQLVVVATDTGNPPRQASV 230
            + S  IS+   +             T T+Q  V A D GNPP  ++V
Sbjct: 1360 SASSFISLNPQTGAVHATRSFDYEQTQTLQFEVQARDRGNPPLSSTV 1406



 Score = 42.7 bits (99), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 44/163 (26%), Positives = 70/163 (42%), Gaps = 34/163 (20%)

Query: 101  QCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLA 157
            Q LD E    Y   + A+D     +    T+ +++ +VND  P F    Y  ++    L 
Sbjct: 1699 QPLDREATSHYTIELLASDAGSPPLHKHLTIRLNISDVNDNAPHFNQQLYTAYI----LE 1754

Query: 158  DLTPGSVIGKVEAADGDKGD--RVTLSLRG------PYEKMFSIN-DSGHI---SIVDLS 205
            +  PGS++  V A+D D GD  R+T S+ G      P      +N + G +      D  
Sbjct: 1755 NRPPGSLLCTVAASDPDTGDNARLTYSIVGNQIQGAPASSFVYVNPEDGRVFAQRTFDYE 1814

Query: 206  ALNTSTIQLVVVATDTGNPPRQA-------------SVPAIMH 235
             L    +Q+VV   D+G+PP  A             + PA++H
Sbjct: 1815 LLQ--MLQIVVGVRDSGSPPLHANTSLHVFVLDENDNAPAVLH 1855



 Score = 37.7 bits (86), Expect = 8.3,   Method: Compositional matrix adjust.
 Identities = 47/202 (23%), Positives = 82/202 (40%), Gaps = 21/202 (10%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTTNKPR---DLRVKYWLSNDYGERFSIS-------R 93
             F++  Y+   LEN P   +L TV  + P    + R+ Y +  +  +    S        
Sbjct: 1742 HFNQQLYTAYILENRPPGSLLCTVAASDPDTGDNARLTYSIVGNQIQGAPASSFVYVNPE 1801

Query: 94   QGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQ--YE 148
             G +   +  DYE     +  V   D+    +  + ++++ V++ ND  P   +P+  +E
Sbjct: 1802 DGRVFAQRTFDYELLQMLQIVVGVRDSGSPPLHANTSLHVFVLDENDNAPAVLHPRPGWE 1861

Query: 149  LFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR------GPYEKMFSINDSGHISIV 202
               P        PGS++ KV A D D G    LS         P   + S +     +  
Sbjct: 1862 HSAPQRLPRSAPPGSLVTKVTAVDADAGHNAWLSYSLLPQSTAPGLFLVSTHTGEVRTAR 1921

Query: 203  DLSALNTSTIQLVVVATDTGNP 224
             L   ++ T Q+VV+  D G+P
Sbjct: 1922 ALLEDDSDTQQVVVLVRDNGDP 1943


>gi|153792706|ref|NP_899044.3| protocadherin Fat 4 precursor [Mus musculus]
 gi|341940688|sp|Q2PZL6.2|FAT4_MOUSE RecName: Full=Protocadherin Fat 4; AltName: Full=FAT tumor suppressor
            homolog 4; AltName: Full=Fat-like cadherin protein FAT-J;
            Flags: Precursor
          Length = 4981

 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 76/269 (28%), Positives = 120/269 (44%), Gaps = 42/269 (15%)

Query: 2    INEDD-----FLQPITLV---VRAIQYDNQDRYALATLIVSKAG--TSLREL-------- 43
            + EDD     FL  +T V    RA+ Y+ Q  Y L        G  T++R          
Sbjct: 1880 VEEDDGDGVFFLNLVTGVFNLTRALDYETQQYYILTVRAEDGGGQSTTIRAYFNILDVND 1939

Query: 44   ---QFSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWL-SNDYGERFSISRQGD 96
                FS + YS S +ENLP+   +L        D    ++ Y + S D   +F++ + G 
Sbjct: 1940 NPPVFSMSSYSTSLMENLPLGSTVLVFNVTDADDGVNSQLSYSIASGDSLGQFAVDKHGV 1999

Query: 97   ISLMQCLDYETEDSYRFTVYATD------TLMTTSATVNISVVNVNDWDPRFRYPQYELF 150
            +  ++ LD E++  Y   +   D      +  T++A V+I +++VND  P F  P+    
Sbjct: 2000 LKTLKALDRESQSFYNLVIQVHDLPQPPTSRFTSTAQVSIILLDVNDNPPMFLSPK---- 2055

Query: 151  LPHIPLADLTP-GSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIND-SGHISIV-DLS 205
            L +IP  + TP  +V+ K +A D D G    +  +L  P    FSI    G + +  +L 
Sbjct: 2056 LTYIP--ENTPIDTVVFKAQATDPDSGPNSYIEYTLLNPSGNKFSIGTIDGEVHLTGELD 2113

Query: 206  ALNTSTIQLVVVATDTGNPPRQASVPAIM 234
                S   L VVATD G PP  +S   ++
Sbjct: 2114 REEVSNYSLTVVATDKGQPPLSSSTEVVV 2142



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 61/192 (31%), Positives = 91/192 (47%), Gaps = 24/192 (12%)

Query: 50   YSVSALENLPVNYVLLTVTTNKPRDLRV----KYWLSNDYGERFSIS-RQGDISLMQCLD 104
            +S    EN P+ Y +  VTT+   D+ +    +Y +  D    F+I+   GDI + + L+
Sbjct: 2779 FSAYVSENSPLGYTVTRVTTSD-EDIGINAISRYSIV-DTSLPFTINPNTGDIVISRPLN 2836

Query: 105  YETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSV 164
             E  D YR  V A D+  T S  V I V ++ND  PRF  P Y L  P +P      GS 
Sbjct: 2837 REDTDRYRIRVSAHDSGWTVSTDVTIFVTDINDNTPRFSRPSYYLDCPELPEL----GSR 2892

Query: 165  IGKVEAADGDKGD--RVTLSLRGPYEKMFSIN-DSGHI---------SIVDLSALNTSTI 212
            + +V A D D+G   +V   ++   E  F IN  +G I         ++   S +N +  
Sbjct: 2893 VTQVSATDPDEGSNGQVFYFIKSQSE-YFRINATTGEIFNKQVLKYQNVSGFSNVNINRH 2951

Query: 213  QLVVVATDTGNP 224
              +V A+D GNP
Sbjct: 2952 SFIVTASDRGNP 2963



 Score = 58.2 bits (139), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 35/101 (34%), Positives = 49/101 (48%), Gaps = 5/101 (4%)

Query: 77   VKYWLSNDYGERFSIS-RQGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNV 135
            V Y L +   + F I    GD+   + LD E    Y   V A D L ++   +NI++ +V
Sbjct: 1775 VTYALISGADDSFRIDPESGDLIATKRLDREHRSKYSLLVRADDGLQSSDMRINITISDV 1834

Query: 136  NDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG 176
            ND  PRF  P Y   +P     D TPGS++  + A D D G
Sbjct: 1835 NDHTPRFSRPVYSFDIPE----DTTPGSLVAAILATDDDSG 1871



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 55/187 (29%), Positives = 88/187 (47%), Gaps = 16/187 (8%)

Query: 56   ENLPVNYVLLTVTTNKPR---DLRVKYWLSNDYGERFSISR-QGDISLMQCLDYETEDSY 111
            EN P++ V+       P    +  ++Y L N  G +FSI    G++ L   LD E   +Y
Sbjct: 2061 ENTPIDTVVFKAQATDPDSGPNSYIEYTLLNPSGNKFSIGTIDGEVHLTGELDREEVSNY 2120

Query: 112  RFTVYATDTL---MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKV 168
              TV ATD     +++S  V + V+++ND +P F    Y + +      ++  G+ I +V
Sbjct: 2121 SLTVVATDKGQPPLSSSTEVVVMVLDINDNNPVFAQAMYRVQIKE----NILTGTDIIQV 2176

Query: 169  EAADGDKGDRVTLS---LRGPYEKMFSIND-SGHISIV-DLSALNTSTIQLVVVATDTGN 223
             AAD D+G    +    + G   + F I+  +G I++   L    T    L V ATD G+
Sbjct: 2177 SAADNDEGTNGQVRYGIVGGNTHQEFRIDSVTGAITVAKSLDRETTPAYTLTVQATDRGS 2236

Query: 224  PPRQASV 230
             PR  S 
Sbjct: 2237 SPRTDSC 2243



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 57/189 (30%), Positives = 94/189 (49%), Gaps = 15/189 (7%)

Query: 56   ENLPVNYVLLTVTTNKPRDLRVKYWL-SNDYGERFSISR-QGDISLMQCLDYETEDSYRF 113
            EN PV  ++ T+T +  R   + Y++ S + G+ F I    G +S+ Q LD+E    Y  
Sbjct: 2580 ENQPVGTLVTTITGSSLRGETLSYYIASGNLGDTFQIDPLTGQVSISQPLDFEKIQKYVV 2639

Query: 114  TVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEA 170
             + A D      ++   ++I+V+++ND  P F   + + F+  I L +L+P  ++  V A
Sbjct: 2640 WIEARDGGFPPFSSYEKLDITVLDINDNAPTF---EEDPFVSEI-LENLSPRKIL-TVSA 2694

Query: 171  ADGDKGDRVTLS---LRGPYEKMFSINDS-GHI-SIVDLSALNTSTIQLVVVATDTGNPP 225
             D D G    L    + G  E  F+IN + G I SI  L     S  +L V ++D G+P 
Sbjct: 2695 TDKDSGPNGQLDYEIVNGNQESSFTINHATGEIRSIRPLDREKISHYELTVKSSDKGSPS 2754

Query: 226  RQASVPAIM 234
            +  SV  I+
Sbjct: 2755 QSTSVKVII 2763



 Score = 54.7 bits (130), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 49/192 (25%), Positives = 96/192 (50%), Gaps = 10/192 (5%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVT-TNKPRDLRVKYWLS-NDYGERFSISR-QGDISLMQ 101
           FS+  YS    EN+ + Y + +V+ T    +  + Y ++  D    F+++   G ++   
Sbjct: 793 FSQAAYSFVVFENVALGYHVGSVSATTMDLNANISYLITTGDQRGMFAMNPVTGQLTTAS 852

Query: 102 CLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTP 161
            +D E +  Y+  + A+   +T    VNI+V ++ND  P F      +      + +   
Sbjct: 853 VIDREEQSFYQLKIVASGGAVTGDTVVNITVKDLNDNAPHFLQAVESINA----VENWQA 908

Query: 162 GSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIND-SGHISIVDLSALNTSTIQLVVVA 218
           G  I + +A D D+G   RV  SL+   + +F+IN+ +G+IS++    ++  + Q+ +VA
Sbjct: 909 GHSIFQAKAVDPDEGVNGRVLYSLKQNPKNLFTINEQNGNISLLGALDVHAGSYQVEIVA 968

Query: 219 TDTGNPPRQASV 230
           +D G P   +S+
Sbjct: 969 SDMGVPQLSSSI 980



 Score = 51.6 bits (122), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 73/237 (30%), Positives = 107/237 (45%), Gaps = 22/237 (9%)

Query: 11  ITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNE-YSVSALENLPVNYVLLTVTT 69
           I L + A       + + A L+V+    +  +  FS+ E Y VS +EN P    LL +  
Sbjct: 548 IVLNISARDQGVHPKVSYAQLVVTVLDVNDEKPVFSQPEGYEVSVVENAPTGTELLVLGA 607

Query: 70  NKPRDL----RVKYWLSNDYGER--FSISR-QGDISLMQCLDYETEDSYRFTVYATD--- 119
              RDL     V++ L     ++  F +    G +S    LD E +  Y  ++ ATD   
Sbjct: 608 TD-RDLGDNGTVRFSLQEAENDQRLFRLDPVSGRLSTASSLDREEQAFYCLSILATDLGS 666

Query: 120 TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRV 179
              +++A VN+S++++ND  P F   QY     HI   +   GS +  V A D D G   
Sbjct: 667 PPQSSTAQVNVSLLDINDNSPVFYPVQY---FAHI-QENEPGGSYVTTVSATDPDMGPNG 722

Query: 180 TL--SLRGPYEKMFSIN-DSGHISI-VDLSALNTSTIQLVVVATDTGN--PPRQASV 230
           T+  S+       F I+  SG IS  + L     +  QL VVATD GN   P QA V
Sbjct: 723 TVKYSISAGDRSRFQIHAKSGVISTKMALDREEKTAYQLQVVATDGGNLQSPNQAIV 779



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 43/139 (30%), Positives = 65/139 (46%), Gaps = 11/139 (7%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSN-DYGERFSISRQGDISLM 100
            F +  Y V+  E+ PVN     V     +   +  + Y +++ + G+ F I   G + + 
Sbjct: 996  FDQISYEVTLSESEPVNSRFFKVQASDKDSGANGEIAYTITDGNNGDAFGIFPDGQLYIK 1055

Query: 101  QCLDYETEDSYRFTVYATDTLMTT-SATVNISVV--NVNDWDPRFRYPQYELFLPHIPLA 157
              LD E +D Y   V A+D  +   SATVN++V+  +VND  P F    Y  +      A
Sbjct: 1056 SELDRELQDRYVLLVVASDRAVEPLSATVNVTVLLEDVNDNRPLFNSTNYTFYFEEEQRA 1115

Query: 158  DLTPGSVIGKVEAADGDKG 176
                GS +GKV A D D G
Sbjct: 1116 ----GSFVGKVSAVDKDFG 1130



 Score = 47.4 bits (111), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 44/164 (26%), Positives = 82/164 (50%), Gaps = 13/164 (7%)

Query: 81   LSNDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDTL---MTTSATVNISVVNVN 136
            L  +   +F+I S  G ++L+  LDYE   +Y   + A D+    + ++ T++I +++ N
Sbjct: 1250 LKGNEERQFAIDSFSGQVTLVGKLDYEATSAYSLLIQAVDSGAIPLNSTCTLSIDILDEN 1309

Query: 137  DWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTL--SLRGPY-EKMFSI 193
            D  P F  P+  LF+    L ++  G ++  V A D D G    L  ++ G      FSI
Sbjct: 1310 DNTPSF--PKSTLFVD--VLENMRIGELVSSVTATDSDSGVNADLHYTITGSNNHGTFSI 1365

Query: 194  N-DSGHISIVDLSALNTSTI-QLVVVATDTGNPPRQASVPAIMH 235
            + ++G I +       T ++ +L + A D G PPR +++  ++ 
Sbjct: 1366 SPNTGSIFLAKKLDFETQSLYKLNITAKDQGRPPRSSTMSVVIQ 1409



 Score = 43.9 bits (102), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 42/143 (29%), Positives = 71/143 (49%), Gaps = 16/143 (11%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLS------NDYGERFSI-SRQGD 96
            +FS+N  S +  E+  +  V+ TV+  + RD  +   +S      N+ G  F+I S  G 
Sbjct: 3090 EFSQNHISATIPESHSIGSVVRTVSA-RDRDTAMNGLISYNIISGNEEG-IFAINSSTGV 3147

Query: 97   ISLMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
            ++L + LDYE    +  T+ ATD      T   ++ +SV++VND  P F  P  + F P 
Sbjct: 3148 VTLAKALDYEMSSKHEMTISATDGGWVARTGYCSLTVSVIDVNDNSPVF-VP--DEFFPT 3204

Query: 154  IPLADLTPGSVIGKVEAADGDKG 176
            + + +   G+ +  + A D D G
Sbjct: 3205 V-MENAPSGTTVIHLNATDADSG 3226



 Score = 42.0 bits (97), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 46/149 (30%), Positives = 70/149 (46%), Gaps = 12/149 (8%)

Query: 95   GDISLMQCLDYETEDSYRFTVYATDT----LMTTSATVNISVVNVNDWDPRFRYPQYELF 150
            G I     LD ET+D+Y   V A+D      +++S +V +++ +VND  PRF   Q+  +
Sbjct: 2417 GQIITSALLDRETKDNYTLVVVASDAGSPESLSSSTSVLVTITDVNDNPPRF---QHHPY 2473

Query: 151  LPHIPLADLTPGSVIGKVEAADGDKGDRVTL--SLRGPYEKMFSINDSGHISIVDLSALN 208
            + HIP +   PGS +  V   D D G    L  SL G   + F I D    +I+    L+
Sbjct: 2474 VTHIP-SPTPPGSFVFAVTVTDADIGSNSELHYSLSGRNSEKFHI-DPLRGAIMAAGPLS 2531

Query: 209  -TSTIQLVVVATDTGNPPRQASVPAIMHF 236
              S +   V   D G+ P+  S    + F
Sbjct: 2532 GASEVTFSVHVKDGGSFPKTDSTTVTVRF 2560



 Score = 41.2 bits (95), Expect = 0.77,   Method: Compositional matrix adjust.
 Identities = 53/211 (25%), Positives = 89/211 (42%), Gaps = 16/211 (7%)

Query: 25   RYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWL 81
            R    +L VS    +     F  +E+  + +EN P    ++ +     +   +  + Y +
Sbjct: 3176 RTGYCSLTVSVIDVNDNSPVFVPDEFFPTVMENAPSGTTVIHLNATDADSGANAVIAYTV 3235

Query: 82   SNDYGERFSIS-RQGDISLMQCLDYETEDSYRFTVYA---TDTLMTTSATVNISVVNVND 137
             +   + F I    G I+    LD+ET+ SY  TV A    D    + ATV+I +   N+
Sbjct: 3236 QSSDSDLFVIDPNMGVITTQGFLDFETKQSYHLTVKAFNVPDEEKCSFATVDIQLKGTNE 3295

Query: 138  WDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAAD---GDKGDRVTLSLRGPYEKMFSIN 194
            + PRF    Y   +        + G+ +G+V A+D   G  G+   L      +K F IN
Sbjct: 3296 YVPRFVSKLYYFEVSEA----ASRGTAVGEVFASDRDMGADGEVHYLIFGNSRKKGFQIN 3351

Query: 195  D-SGHISIVD-LSALNTSTIQLVVVATDTGN 223
              +G I +   L       + L V+A + GN
Sbjct: 3352 KMTGQIYVSGLLDREKEERVSLKVLAKNFGN 3382



 Score = 40.8 bits (94), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 38/135 (28%), Positives = 64/135 (47%), Gaps = 8/135 (5%)

Query: 89   FSISRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYP 145
            FS+S  G +S  + +D E    +  +V   D+    M+++ TV+I+V++ ND   + R  
Sbjct: 3560 FSLSTAGVLSTTREIDREQIADFYLSVVTRDSGAPQMSSTGTVHITVLDQNDNPSQSR-- 3617

Query: 146  QYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSGHISIVDLS 205
              E+F+ +    +L PG  +G V+  D D  D    SL      +FSI  +G   +    
Sbjct: 3618 TVEIFVNY--YGNLFPGGTLGSVKPQDPDVLDSFHCSLTSGVTSLFSI-PAGSCDLSSQP 3674

Query: 206  ALNTSTIQLVVVATD 220
                 T  L VV++D
Sbjct: 3675 RSTDGTFDLTVVSSD 3689



 Score = 39.3 bits (90), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 77/167 (46%), Gaps = 24/167 (14%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKP-----RDLRVKYWLSNDYGERFSIS-RQGDIS 98
            F K+   V  LEN+ +  ++ +VT          DL      SN++G  FSIS   G I 
Sbjct: 1315 FPKSTLFVDVLENMRIGELVSSVTATDSDSGVNADLHYTITGSNNHGT-FSISPNTGSIF 1373

Query: 99   LMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELF---LP 152
            L + LD+ET+  Y+  + A D      +++ +V I V + ND  P F  P  ++F   + 
Sbjct: 1374 LAKKLDFETQSLYKLNITAKDQGRPPRSSTMSVVIQVRDFNDNPPSF--PPGDIFKSIVE 1431

Query: 153  HIPLADLTPGSVIGKVEAADGDKGDRVTLSL----RGPYEKMFSIND 195
            +IPL     G+ +  V A D D      LS     + P    FSI++
Sbjct: 1432 NIPL-----GTSVISVTAHDPDADINGQLSYAIIQQMPRGNHFSIDE 1473



 Score = 39.3 bits (90), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 56/208 (26%), Positives = 91/208 (43%), Gaps = 23/208 (11%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGERFSISRQ-GDISLM 100
           F  + Y     E+  V   +L V     ++  +  ++Y L  D G  F +  + G I++ 
Sbjct: 250 FGSSHYQAGVPEDAVVGSSVLQVAAADADEGTNADIRYRL-QDEGTPFQMDPETGLITVR 308

Query: 101 QCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDP--RFRY-PQYELFLPHI 154
           + LD+E    Y  TV ATD     +T  A   I +++VND DP  +FRY P    +    
Sbjct: 309 EPLDFEARRQYSLTVQATDRGVPSLTGRAEAFIQLLDVNDNDPVVKFRYFPATSRYASVD 368

Query: 155 PLADLTPGSVIGKVEAADGDK----GDRVTLSLRGPYEKMFSINDSG--HISIVDL-SAL 207
             A +  G+V+  +   D D     G+     L G  ++ F +  S   ++S++ + SAL
Sbjct: 369 ENAQV--GTVVALLTVTDADSPAANGNISVQILGGNEQRHFEVQRSKVPNLSLIKVASAL 426

Query: 208 NTSTI---QLVVVATDTGNPPRQASVPA 232
           +   I    L V  +D    P  A V A
Sbjct: 427 DRERIPSYNLTVSVSDNSGAPPTAEVQA 454


>gi|4887715|gb|AAA79329.2| adherin [Drosophila melanogaster]
          Length = 3503

 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 65/214 (30%), Positives = 96/214 (44%), Gaps = 27/214 (12%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWL-------------SNDYGER 88
            F K+EYSV+  E+  +N  ++ V     +   + R+ Y +             S+D  + 
Sbjct: 983  FEKDEYSVNVSESRSINAQIIQVNASDLDTGNNARITYRIVDAGVDNVTNSISSSDVSQH 1042

Query: 89   FSI-SRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRY 144
            F I    G I L   LD ET D Y+ T+ ATD           V + V++ ND DP+F+ 
Sbjct: 1043 FGIFPNSGWIYLRAPLDRETRDRYQLTILATDNGTPAAHAKTRVIVRVLDANDNDPKFQK 1102

Query: 145  PQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRG-PYEKMFSIND-SGHISIV 202
             +YE  +      +L  GSV+G V A+D D G+   +     P    F ++  +G IS  
Sbjct: 1103 SKYEFRIEE----NLRRGSVVGVVTASDLDLGENAAIRYSLLPINSSFQVHPVTGEISTR 1158

Query: 203  D-LSALNTSTIQLVVVATDTGNPPRQASVPAIMH 235
            + L         LVV A D G P R A VP  +H
Sbjct: 1159 EPLDRELRELYDLVVEARDQGTPVRSARVPVRIH 1192



 Score = 67.8 bits (164), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 67/211 (31%), Positives = 104/211 (49%), Gaps = 17/211 (8%)

Query: 29  ATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGER 88
           AT++V+    +  E  F ++ Y+VS  EN PV   +L V+ + P D  V   ++   GE 
Sbjct: 542 ATVLVTIHDVNDNEPIFDQSFYNVSVAENEPVGRCILKVSASDP-DCGVNAMVNYTIGEG 600

Query: 89  FS-------ISRQGDISLMQCLDYETEDSYRFTVYATDT-LMTTSATVNISVVNVNDWDP 140
           F         S  G+I +   LD+E   SY F V ATD   ++T+A + + + +VND  P
Sbjct: 601 FKHLTEFEVRSASGEICIAGELDFERRSSYEFPVLATDRGGLSTTAMIKMQLTDVNDNRP 660

Query: 141 RFRYPQYELFLPHIPLADLTPGSV-IGKVEAADGDKGDRVTLSLR---GPYEKMFSINDS 196
            F   +Y++ L   P A     S  I  V A D D G+   +S R   G    +F I+ S
Sbjct: 661 VFYPREYKVSLRESPKASSQASSTPIVAVVATDPDYGNFGQVSYRIVAGNEAGIFRIDRS 720

Query: 197 -GHISIV--DLSALNTSTIQLV-VVATDTGN 223
            G I +V  D+ ++ T  + ++ + ATD GN
Sbjct: 721 TGEIFVVRPDMLSVRTQPMHMLNISATDGGN 751



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 62/201 (30%), Positives = 104/201 (51%), Gaps = 21/201 (10%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGERFSISRQ-GDISL 99
            +F  ++Y+ S  E+ P+   ++ ++    +   + R+ Y L+N+   +F+I  Q G I+ 
Sbjct: 1898 RFKLSKYTGSVQEDAPLGTSVVQISAVDADLGVNARLVYSLANETQWQFAIDGQSGLITT 1957

Query: 100  MQCLDYETEDSYRFTVYATD----TLMTTSATVNISVVNVNDWDPRF-RYPQYELFLPHI 154
            +  LD E + SY F V ATD     + + +  V I+V+++ND  P F RYP    ++  +
Sbjct: 1958 VGKLDRELQASYNFMVLATDGGRYEVRSATVPVQINVLDINDNRPIFERYP----YIGQV 2013

Query: 155  PLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKM---FSINDS-GHISIVD-LSAL 207
            P A + PG  + KV+A D D G    +  SL      +   F IN S G +S    L++ 
Sbjct: 2014 P-ALIQPGQTLLKVQAIDADLGANAEIVYSLNAENSAVSAKFRINPSTGALSASQSLASE 2072

Query: 208  NTSTIQLVVVATDTGNPPRQA 228
            +   + L VVA D GNPP+ +
Sbjct: 2073 SGKLLHLEVVARDKGNPPQSS 2093



 Score = 47.0 bits (110), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 57/209 (27%), Positives = 88/209 (42%), Gaps = 39/209 (18%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGERFSISRQ--------- 94
            +F K++Y     ENL    V+  VT +   DL        D GE  +I            
Sbjct: 1099 KFQKSKYEFRIEENLRRGSVVGVVTAS---DL--------DLGENAAIRYSLLPINSSFQ 1147

Query: 95   -----GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQ 146
                 G+IS  + LD E  + Y   V A D    + +    V I V +VND  P    PQ
Sbjct: 1148 VHPVTGEISTREPLDRELRELYDLVVEARDQGTPVRSARVPVRIHVSDVNDNAPEIADPQ 1207

Query: 147  YELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRG---PYEKMFSINDSGHI- 199
             ++        +  PG+ + +V A D D G   +++   ++G       +FSI+ +  + 
Sbjct: 1208 EDVVSVR---EEQPPGTEVVRVRAVDRDHGQNASITYSIVKGRDSDGHGLFSIDPTSGVI 1264

Query: 200  -SIVDLSALNTSTIQLVVVATDTGNPPRQ 227
             + V L     S  +L V A+D GNPPR+
Sbjct: 1265 RTRVVLDHEERSIYRLGVAASDGGNPPRE 1293



 Score = 45.1 bits (105), Expect = 0.052,   Method: Compositional matrix adjust.
 Identities = 59/207 (28%), Positives = 94/207 (45%), Gaps = 27/207 (13%)

Query: 45  FSKNEYSVSALENLPVNYVLLTV---TTNKPRDLRVKYWLS---NDYGERFSIS-RQGDI 97
           F+++ Y  +  EN  V   +L V    T+   +  V+Y ++   +D  + F I  R G I
Sbjct: 233 FNQSRYFATVPENATVGTSVLQVYASDTDADENGLVEYAINRRQSDKEQMFRIDPRTGAI 292

Query: 98  SLMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFL--- 151
            + + LD+ET++ +   V A D     + T+A V+I V +VND  P        +FL   
Sbjct: 293 YINKALDFETKELHELVVVAKDHGEQPLETTAFVSIRVTDVNDNQPTINV----IFLSDD 348

Query: 152 --PHIPLADLTPGSVIGKVEAADGDKGDR-----VTLSLRGPYEKMFSINDSGHISIVDL 204
             P I  +   PG  + ++   D D         VTL+    +  + + ++S ++ IV L
Sbjct: 349 ASPKISES-AQPGEFVARISVHDPDSKTEYANVNVTLNGGDGHFALTTRDNSIYLVIVHL 407

Query: 205 SALN--TSTIQLVVVATDTGNPPRQAS 229
                  S   L VVATD G PP  AS
Sbjct: 408 PLDREIVSNYTLSVVATDKGTPPLHAS 434



 Score = 42.7 bits (99), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 47/160 (29%), Positives = 69/160 (43%), Gaps = 29/160 (18%)

Query: 95   GDISLMQCLDYETEDSYRFTVYATDT------LMTTSATVNISVVNVNDWDPRFRYPQ-- 146
            G +SL   LD+E    Y   V A D        + TS TV + +++ ND  P F  P   
Sbjct: 1496 GALSLQAPLDFEAVQEYLLIVQALDQSSNVTERLQTSVTVRLRILDANDHAPHFVSPNSS 1555

Query: 147  ----YELFLPHIPLADLTP-GSVIGKVEAADGDKGDRVTLSLR---GPYEKMFSIN-DSG 197
                  LF     ++D T  G V+  + A D D GD   L+     G  E  F IN  +G
Sbjct: 1556 GGKTASLF-----ISDATRIGEVVAHIVAVDEDSGDNGQLTYEITGGNGEGRFRINSQTG 1610

Query: 198  HISIVDLSALNTSTIQ------LVVVATDTGNP-PRQASV 230
             I +V      T  ++      L++ A D G P P+++S+
Sbjct: 1611 IIELVKSLPPATEDVEKGGRFNLIISAKDHGQPEPKKSSL 1650



 Score = 42.7 bits (99), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 40/122 (32%), Positives = 59/122 (48%), Gaps = 16/122 (13%)

Query: 74   DLRVKYWL---SNDYGER-FSISRQ-GDISLMQCLDYETEDSYRFTVYATDTL-----MT 123
            DLRV Y L   + D  E  F I R  G++ + + LD E +  +R  + A DT       +
Sbjct: 1354 DLRVTYTLNPLTKDLIEAAFDIDRHSGNLVVARLLDREVQSEFRLEIRALDTTASNNPQS 1413

Query: 124  TSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTP-GSVIGKVEAADGDKGDRVTLS 182
            ++ TV I V +VND  P   +PQ  + L    +++ TP G++I    A D D G    L 
Sbjct: 1414 SAITVKIEVADVNDNAP--EWPQDPIDL---QVSEATPVGTIIHNFTATDADTGTNGDLQ 1468

Query: 183  LR 184
             R
Sbjct: 1469 YR 1470



 Score = 40.8 bits (94), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 63/229 (27%), Positives = 104/229 (45%), Gaps = 17/229 (7%)

Query: 9   QPITLV-VRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTV 67
           QP+ ++ + A    N    A A + +S      R   F K  Y+    E++P   V+ +V
Sbjct: 737 QPMHMLNISATDGGNLRSNADAVVFLSIIDAMQRPPIFEKARYNYYVKEDIPRGTVVGSV 796

Query: 68  ---TTNKPRDLRVKYWL-SNDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYAT--DT 120
              + +      V+Y + S D    FSI +  G+I + + LD+E +      + AT  + 
Sbjct: 797 IAASGDVAHRSPVRYSIYSGDPDGYFSIETNSGNIRIAKPLDHEAKSQVLLNIQATLGEP 856

Query: 121 LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGD--R 178
            +     VNI V +VND  P F      + +P    A+L  G+ +    A D D G   +
Sbjct: 857 PVYGHTQVNIEVEDVNDNAPEFEASMVRISVPE--SAEL--GAPLYAAHAHDKDSGSSGQ 912

Query: 179 VTLSL-RGPYEKMFSIN-DSGHISIVD-LSALNTSTIQLVVVATDTGNP 224
           VT SL +   + +F+I+  SGH+ +   L   ++    L+V ATD G P
Sbjct: 913 VTYSLVKESGKGLFAIDARSGHLILSQHLDYESSQRHTLIVTATDGGVP 961



 Score = 40.4 bits (93), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 50/186 (26%), Positives = 81/186 (43%), Gaps = 26/186 (13%)

Query: 76   RVKYWLSNDYGER-FSI-SRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNI 130
            +V Y L  + G+  F+I +R G + L Q LDYE+   +   V ATD     ++T+ T+ +
Sbjct: 912  QVTYSLVKESGKGLFAIDARSGHLILSQHLDYESSQRHTLIVTATDGGVPSLSTNLTILV 971

Query: 131  SVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR------ 184
             V +VND  P F   +Y + +        +  + I +V A+D D G+   ++ R      
Sbjct: 972  DVQDVNDNPPVFEKDEYSVNVSE----SRSINAQIIQVNASDLDTGNNARITYRIVDAGV 1027

Query: 185  ---------GPYEKMFSI-NDSGHISI-VDLSALNTSTIQLVVVATDTGNPPRQASVPAI 233
                         + F I  +SG I +   L        QL ++ATD G P   A    I
Sbjct: 1028 DNVTNSISSSDVSQHFGIFPNSGWIYLRAPLDRETRDRYQLTILATDNGTPAAHAKTRVI 1087

Query: 234  MHFPEA 239
            +   +A
Sbjct: 1088 VRVLDA 1093



 Score = 39.7 bits (91), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 31/108 (28%), Positives = 46/108 (42%), Gaps = 6/108 (5%)

Query: 92   SRQGDISLMQCLDYETEDSYRFTVYATDTL-MTTSATVNISVVNVNDWDPRFRYPQYELF 150
            S  G ++     DYE    Y   + A+D      S  V + + + +++ P+F    Y   
Sbjct: 2865 SESGLVTSAFVFDYEQRQRYDMELLASDMGGKKASVAVRVEIESRDEFTPQFTERTYRFV 2924

Query: 151  LPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDS 196
            LP      L  G V+G+V A D D G   RV   L  P+   F +N S
Sbjct: 2925 LP--AAVALPQGYVVGQVTATDSDSGPDGRVVYQLSAPHSH-FKVNRS 2969



 Score = 39.7 bits (91), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 62/220 (28%), Positives = 89/220 (40%), Gaps = 47/220 (21%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTT-------NKPRDLRVKYWLSNDYGERFSISRQ-G 95
            +F +  Y  + LEN+P    +L VT        N      +   ++ND    F +  Q G
Sbjct: 1665 RFLQAVYRATILENVPSGSFVLQVTAKPLHGAENANLSYEIPAGVANDL---FHVDWQRG 1721

Query: 96   DISLMQCLDYETEDSYRFTVY-------------------ATDTLMTTS-------ATVN 129
             I+     D E++ SY   VY                   ++D++  TS       AT+ 
Sbjct: 1722 IITTRGQFDRESQASYVLPVYVRDANRQSTLSSSAVRKQRSSDSIGDTSNGQHFDVATIY 1781

Query: 130  ISVVNVNDWDPRFRYPQ-YELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR---G 185
            I+V +VND  P FR    Y L +P     +  PG VI  V A+D D+G    L      G
Sbjct: 1782 ITVGDVNDNSPEFRPGSCYGLSIPE----NSEPG-VIHTVVASDLDEGPNADLIYSITGG 1836

Query: 186  PYEKMFSIN-DSGHISIVDLSALNTSTIQLVVVATDTGNP 224
                 FSI+  SG +S   L     S   L + A+D G P
Sbjct: 1837 NLGNKFSIDSSSGELSARPLDREQHSRYTLQIQASDRGQP 1876



 Score = 37.7 bits (86), Expect = 8.8,   Method: Compositional matrix adjust.
 Identities = 41/140 (29%), Positives = 63/140 (45%), Gaps = 14/140 (10%)

Query: 96  DISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLP 152
           D+ +   LD ET   Y   + A D     +    TVNI++ +VND  P F   +Y   +P
Sbjct: 184 DLQISGFLDRETTPGYSLLIEALDGGTPPLRGFMTVNITIQDVNDNQPIFNQSRYFATVP 243

Query: 153 HIPLADLTPGSVIGKVEAADGDKGDRVTLSL-----RGPYEKMFSIN-DSGHISIVDLSA 206
                + T G+ + +V A+D D  +   +       +   E+MF I+  +G I I     
Sbjct: 244 E----NATVGTSVLQVYASDTDADENGLVEYAINRRQSDKEQMFRIDPRTGAIYINKALD 299

Query: 207 LNTSTI-QLVVVATDTGNPP 225
             T  + +LVVVA D G  P
Sbjct: 300 FETKELHELVVVAKDHGEQP 319


>gi|321466721|gb|EFX77715.1| hypothetical protein DAPPUDRAFT_321186 [Daphnia pulex]
          Length = 1805

 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 50/145 (34%), Positives = 74/145 (51%), Gaps = 13/145 (8%)

Query: 89   FSI-SRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRY 144
            FSI  R G ++  Q LDYE    Y  TV A D     +++ A V ++++N+ND  P F  
Sbjct: 937  FSIDGRSGVVTNKQRLDYEASPEYNLTVVAHDAGIPSLSSMAQVKVTLININDLSPAFTS 996

Query: 145  PQYELFLPHIPLADLTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSINDSGHISIV 202
              YE  +P    A    G+ +  V A DGD G    +T SL G   K F+I+ SG I++ 
Sbjct: 997  KSYESRIPEHSAA----GTAVLTVSATDGDAGSFGLITYSLTGENAKYFTIDASGTITVT 1052

Query: 203  DLSALN---TSTIQLVVVATDTGNP 224
            D   L+   + ++ L+V A+D   P
Sbjct: 1053 DPGGLDRERSPSLTLLVAASDLAPP 1077



 Score = 45.8 bits (107), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 38/133 (28%), Positives = 61/133 (45%), Gaps = 8/133 (6%)

Query: 107 TEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIG 166
           T + +   +  +D   T +AT+ IS+ +VN+  P F    Y + +  +    L PGS + 
Sbjct: 627 TTEEFNLNILVSDGTKTDTATLKISIRDVNNHKPTFLQAIYNVSISEL----LIPGSNVT 682

Query: 167 KVEAADGDKGDRVTLSL---RGPYEKMFSINDSGHISIVD-LSALNTSTIQLVVVATDTG 222
           +V A D D G+   L+    R  Y K     ++G I +   L+    ST  L VVA D G
Sbjct: 683 QVSAKDADFGENARLNYKIERASYNKFQIDPETGVIKVTQPLNFDRQSTYSLQVVAVDNG 742

Query: 223 NPPRQASVPAIMH 235
            P    S   +++
Sbjct: 743 WPALTGSAAVLVN 755


>gi|194853658|ref|XP_001968202.1| GG24633 [Drosophila erecta]
 gi|190660069|gb|EDV57261.1| GG24633 [Drosophila erecta]
          Length = 3556

 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 66/214 (30%), Positives = 95/214 (44%), Gaps = 27/214 (12%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWL-------------SNDYGER 88
            F K EYSV+  E+  +N  ++ V     +   + R+ Y +             S+D  + 
Sbjct: 1036 FEKEEYSVNVSESRSINAQIIQVNASDLDTGNNARITYRIVDAGVDNVTNSISSSDVSQH 1095

Query: 89   FSI-SRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRY 144
            F I    G I L   LD ET D Y+ TV ATD           V + V++ ND DP+F+ 
Sbjct: 1096 FGIFPNSGWIYLRAPLDRETRDRYQLTVLATDNGTPAAHAKTRVIVRVLDANDNDPKFQK 1155

Query: 145  PQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRG-PYEKMFSIND-SGHISIV 202
             +YE  +      +L  GSV+G V A+D D G+   +     P    F ++  +G IS  
Sbjct: 1156 SKYEFRIEE----NLRRGSVVGVVTASDLDLGENAAIRYSLLPINSSFQVHPVTGEISTR 1211

Query: 203  D-LSALNTSTIQLVVVATDTGNPPRQASVPAIMH 235
            + L         LVV A D G P R A VP  +H
Sbjct: 1212 EPLDRELRELYDLVVEARDQGTPVRSARVPVRIH 1245



 Score = 68.6 bits (166), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 67/211 (31%), Positives = 104/211 (49%), Gaps = 17/211 (8%)

Query: 29  ATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGER 88
           AT++V+    +  E  F ++ Y+VS  EN PV   +L V+ + P D  V   ++   GE 
Sbjct: 595 ATILVTIHDVNDNEPIFDQSFYNVSVAENEPVGRCILKVSASDP-DCGVNAMVNYTIGEG 653

Query: 89  FS-------ISRQGDISLMQCLDYETEDSYRFTVYATDT-LMTTSATVNISVVNVNDWDP 140
           F         S  G+I +   LD+E   SY F V ATD   ++T+A + + + +VND  P
Sbjct: 654 FKHLTEFEVRSASGEICIAGELDFERRSSYEFPVLATDRGGLSTTAMIKMQLTDVNDNRP 713

Query: 141 RFRYPQYELFLPHIPLADLTPGSV-IGKVEAADGDKGDRVTLSLR---GPYEKMFSINDS 196
            F   +Y++ L   P A     S  I  V A D D G+   +S R   G    +F I+ S
Sbjct: 714 VFYPREYKVSLRESPKAPTQASSTPIVAVVATDPDSGNFGQVSYRIVAGNEAGIFRIDRS 773

Query: 197 -GHISIV--DLSALNTSTIQLV-VVATDTGN 223
            G I +V  D+ ++ T  + ++ + ATD GN
Sbjct: 774 TGEIFVVRPDMLSVRTQPMHMLNISATDGGN 804



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 62/200 (31%), Positives = 103/200 (51%), Gaps = 21/200 (10%)

Query: 45   FSKNEYSVSALENLPVNYVLL---TVTTNKPRDLRVKYWLSNDYGERFSI-SRQGDISLM 100
            F  ++Y+ S  E+ P+   +L    V  +   + R+ Y L+N+   +F+I S+ G I+ +
Sbjct: 1952 FKLSKYTGSVQEDAPLGTSVLQINAVDADLGVNARLVYSLANETQWQFAIDSQSGLITTV 2011

Query: 101  QCLDYETEDSYRFTVYATD----TLMTTSATVNISVVNVNDWDPRF-RYPQYELFLPHIP 155
              LD E + SY F V ATD     + + +  V I+V+++ND  P F RYP    ++  +P
Sbjct: 2012 GKLDRELQASYNFMVLATDGGRYEVRSATVPVQINVLDINDNRPVFERYP----YIGQVP 2067

Query: 156  LADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKM---FSINDS-GHISIVD-LSALN 208
             A + PG  + KV+A D D G    +  SL+     +   F IN S G +S    L++ +
Sbjct: 2068 -ALIQPGQTLLKVQALDADLGANAEIVYSLKAENSAVSAKFRINPSTGALSASQSLASES 2126

Query: 209  TSTIQLVVVATDTGNPPRQA 228
               + L V+A D G PP+ +
Sbjct: 2127 GKLLHLEVIARDKGTPPQSS 2146



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 54/186 (29%), Positives = 84/186 (45%), Gaps = 26/186 (13%)

Query: 76   RVKYWLSNDYGER-FSI-SRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNI 130
            +V Y L +D G+R F+I +R G +SL Q LDYE+   +   V ATD     ++T+ T+ +
Sbjct: 965  QVSYSLVSDSGKRLFAIDARSGHLSLTQHLDYESSQRHSLIVTATDGGVPSLSTNLTILV 1024

Query: 131  SVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR------ 184
             V +VND  P F   +Y + +        +  + I +V A+D D G+   ++ R      
Sbjct: 1025 DVQDVNDNPPVFEKEEYSVNVSE----SRSINAQIIQVNASDLDTGNNARITYRIVDAGV 1080

Query: 185  ---------GPYEKMFSI-NDSGHISI-VDLSALNTSTIQLVVVATDTGNPPRQASVPAI 233
                         + F I  +SG I +   L        QL V+ATD G P   A    I
Sbjct: 1081 DNVTNSISSSDVSQHFGIFPNSGWIYLRAPLDRETRDRYQLTVLATDNGTPAAHAKTRVI 1140

Query: 234  MHFPEA 239
            +   +A
Sbjct: 1141 VRVLDA 1146



 Score = 45.8 bits (107), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 57/209 (27%), Positives = 88/209 (42%), Gaps = 39/209 (18%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGERFSISRQ--------- 94
            +F K++Y     ENL    V+  VT +   DL        D GE  +I            
Sbjct: 1152 KFQKSKYEFRIEENLRRGSVVGVVTAS---DL--------DLGENAAIRYSLLPINSSFQ 1200

Query: 95   -----GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQ 146
                 G+IS  + LD E  + Y   V A D    + +    V I V +VND  P    PQ
Sbjct: 1201 VHPVTGEISTREPLDRELRELYDLVVEARDQGTPVRSARVPVRIHVSDVNDNAPEIADPQ 1260

Query: 147  YELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRG---PYEKMFSINDSGHI- 199
             ++        +  PG+ + +V A D D G   +++   ++G       +FSI+ S  + 
Sbjct: 1261 EDVVSVR---EEQPPGTEVVRVRAVDRDNGQNASITYSIVKGRDSDGHGLFSIDPSSGVI 1317

Query: 200  -SIVDLSALNTSTIQLVVVATDTGNPPRQ 227
             + V L     S  +L V A+D G+PPR+
Sbjct: 1318 RTRVVLDHEERSIYRLGVAASDGGSPPRE 1346



 Score = 45.8 bits (107), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 50/160 (31%), Positives = 73/160 (45%), Gaps = 29/160 (18%)

Query: 95   GDISLMQCLDYETEDSYRFTVYATDT------LMTTSATVNISVVNVNDWDPRFRYPQ-- 146
            G +SL   LD+ET   Y   V A D        + TS TV + V++ ND  P+F  P   
Sbjct: 1549 GSLSLQAPLDFETVQEYLLIVQALDQSSNVTERLQTSVTVRLRVLDANDNAPKFVSPNSS 1608

Query: 147  ----YELFLPHIPLADLTP-GSVIGKVEAADGDKGD--RVTLSLRGPY-EKMFSIN-DSG 197
                  LF     ++D T  G V+  + A D D GD  R+T  + G   E  F IN  +G
Sbjct: 1609 GGKTASLF-----ISDATRIGEVVAHIVAVDEDSGDNGRLTYEITGGNGEGRFRINSQTG 1663

Query: 198  HISIVDLSALNTSTIQ------LVVVATDTGNP-PRQASV 230
             I +V      T  ++      L++ A D G P P+++S+
Sbjct: 1664 IIELVKSLPPATEDVEKGGRFNLIISAKDHGQPEPKKSSL 1703



 Score = 45.1 bits (105), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 59/207 (28%), Positives = 94/207 (45%), Gaps = 27/207 (13%)

Query: 45  FSKNEYSVSALENLPVNYVLLTV---TTNKPRDLRVKYWLS---NDYGERFSIS-RQGDI 97
           F+++ Y  +  EN  V   +L V    T+   +  V+Y ++   +D  + F I  R G I
Sbjct: 286 FNQSRYFATVPENATVGTSVLQVYASDTDADENGLVEYAINRRQSDKEQMFRIDPRTGAI 345

Query: 98  SLMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFL--- 151
            + + LD+ET++ +   V A D     + T+A V+I V +VND  P        +FL   
Sbjct: 346 YINKALDFETKELHELVVVAKDHGEQPLETTAFVSIRVTDVNDNQPTINV----IFLSDD 401

Query: 152 --PHIPLADLTPGSVIGKVEAADGDKGDR-----VTLSLRGPYEKMFSINDSGHISIVDL 204
             P I  +   PG  + ++   D D         VTL+    +  + + ++S ++ IV L
Sbjct: 402 ASPKISES-AQPGEFVARISVHDPDSKTEYANVNVTLNGGDGHFALTTRDNSIYLVIVHL 460

Query: 205 SALN--TSTIQLVVVATDTGNPPRQAS 229
                  S   L VVATD G PP  AS
Sbjct: 461 PLDREIVSNYTLSVVATDKGTPPLHAS 487



 Score = 44.3 bits (103), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 64/229 (27%), Positives = 105/229 (45%), Gaps = 17/229 (7%)

Query: 9    QPITLV-VRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTV 67
            QP+ ++ + A    N    A A + +S      R   F K  Y+    E++P   V+ +V
Sbjct: 790  QPMHMLNISATDGGNLRSNADAVVFLSIIDAMQRPPIFEKARYNYYVKEDIPRGTVVGSV 849

Query: 68   ---TTNKPRDLRVKYWL-SNDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYAT--DT 120
               + +      VKY + S D    FSI +  G+I + + LD+E +      + AT  + 
Sbjct: 850  IAASGDIAHRSPVKYSIYSGDPDGYFSIETNSGNIRIAKPLDHEAKSQVLLNIQATLGEP 909

Query: 121  LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGD--R 178
             +     VNI V +VND  P F      + +P    A+L  G+ +    A D D G   +
Sbjct: 910  PVYGHTQVNIEVEDVNDNAPEFEASMVRISVPES--AEL--GAPLYAAHAHDKDSGSSGQ 965

Query: 179  VTLSL-RGPYEKMFSIN-DSGHISIVD-LSALNTSTIQLVVVATDTGNP 224
            V+ SL     +++F+I+  SGH+S+   L   ++    L+V ATD G P
Sbjct: 966  VSYSLVSDSGKRLFAIDARSGHLSLTQHLDYESSQRHSLIVTATDGGVP 1014



 Score = 43.9 bits (102), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 41/122 (33%), Positives = 59/122 (48%), Gaps = 16/122 (13%)

Query: 74   DLRVKYWL---SNDYGER-FSISRQ-GDISLMQCLDYETEDSYRFTVYATDTLMT----- 123
            DLRV Y L   + D  E  F I R  G++ + + LD E +  +R  + A DT  T     
Sbjct: 1407 DLRVTYTLNPLTKDLIEAAFDIDRHSGNLVVARLLDREVQSEFRLEIRALDTTATNNPQS 1466

Query: 124  TSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTP-GSVIGKVEAADGDKGDRVTLS 182
            ++ TV I V +VND  P   +PQ  + L    +++ TP G++I    A D D G    L 
Sbjct: 1467 SAITVKIEVADVNDNAP--EWPQDPIDL---QVSEATPIGTIIHNFTATDADTGTNGDLQ 1521

Query: 183  LR 184
             R
Sbjct: 1522 YR 1523



 Score = 38.9 bits (89), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 62/220 (28%), Positives = 89/220 (40%), Gaps = 47/220 (21%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTT-------NKPRDLRVKYWLSNDYGERFSISRQ-G 95
            +F +  Y  + LEN+P    +L VT        N      +   ++ND    F +  Q G
Sbjct: 1718 RFLQAVYRATILENVPSGSFVLQVTAKSLHGAENANLSYEIPAGVANDL---FHVDWQRG 1774

Query: 96   DISLMQCLDYETEDSYRFTVY-------------------ATDTLMTTS-------ATVN 129
             I+     D E++ SY   VY                   ++D++  TS       AT+ 
Sbjct: 1775 IITSRGQFDRESQASYVLPVYVRDANRLSTLSSSAVRKQRSSDSIGDTSNGQHFDVATIY 1834

Query: 130  ISVVNVNDWDPRFRYPQ-YELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR---G 185
            I+V +VND  P FR    Y L +P     +  PG VI  V A+D D+G    L      G
Sbjct: 1835 ITVGDVNDNSPEFRPGSCYGLSVPE----NSEPG-VIHTVVASDLDEGPNADLIYSITGG 1889

Query: 186  PYEKMFSIN-DSGHISIVDLSALNTSTIQLVVVATDTGNP 224
                 FSI+  SG +S   L     S   L + A+D G P
Sbjct: 1890 NLGNKFSIDSSSGELSARPLDREQHSRYTLQIQASDRGQP 1929



 Score = 38.1 bits (87), Expect = 6.6,   Method: Compositional matrix adjust.
 Identities = 30/108 (27%), Positives = 46/108 (42%), Gaps = 6/108 (5%)

Query: 92   SRQGDISLMQCLDYETEDSYRFTVYATDTLMTTSA-TVNISVVNVNDWDPRFRYPQYELF 150
            S  G ++     DYE    Y   + A+D     +   V + + + +++ P+F    Y   
Sbjct: 2918 SETGLVTSAFVFDYEQRQRYDMELLASDMGGKKAGVAVRVEIESRDEFTPQFTERTYRFV 2977

Query: 151  LPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDS 196
            LP      L  G V+G+V A D D G   RV   L  P+   F +N S
Sbjct: 2978 LP--AAVALPQGYVVGQVTATDSDSGPDGRVVYQLSAPHSH-FKVNRS 3022



 Score = 38.1 bits (87), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 44/149 (29%), Positives = 66/149 (44%), Gaps = 18/149 (12%)

Query: 91  ISRQG----DISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFR 143
           I R G    D+ +   LD ET   Y   + A D     +    TVNI++ +VND  P F 
Sbjct: 228 IERDGVLYLDLQISGFLDRETTPGYSLLIEALDGGTPPLRGFMTVNITIQDVNDNQPIFN 287

Query: 144 YPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSL-----RGPYEKMFSIN-DSG 197
             +Y   +P     + T G+ + +V A+D D  +   +       +   E+MF I+  +G
Sbjct: 288 QSRYFATVPE----NATVGTSVLQVYASDTDADENGLVEYAINRRQSDKEQMFRIDPRTG 343

Query: 198 HISIVDLSALNTSTI-QLVVVATDTGNPP 225
            I I       T  + +LVVVA D G  P
Sbjct: 344 AIYINKALDFETKELHELVVVAKDHGEQP 372


>gi|196004380|ref|XP_002112057.1| hypothetical protein TRIADDRAFT_84 [Trichoplax adhaerens]
 gi|190585956|gb|EDV26024.1| hypothetical protein TRIADDRAFT_84, partial [Trichoplax adhaerens]
          Length = 2004

 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 55/193 (28%), Positives = 91/193 (47%), Gaps = 16/193 (8%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYW-LSNDYGERFSISRQGDISL 99
            +F++  Y+ +  EN+   YV+ TVT    +   + ++ Y+ +  ++  RF++   G I++
Sbjct: 1474 RFAEQYYTATVAENVETGYVVTTVTATDEDSSENTKLSYFFIKGNHDSRFAVDNNGRITV 1533

Query: 100  MQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADL 159
             + L+YE E SY  T+ A D     +  VNISV +VND  P+F    Y   +      D 
Sbjct: 1534 EKYLNYEKETSYSLTLQAFDGRFYGTTIVNISVTDVNDNRPQFTKFSYTARIKE----DT 1589

Query: 160  TPGSVIGKVEAADGDK--GDRVTLSLRGPY-----EKMFSINDSGHISI-VDLSALNTST 211
              G+ +  + A D DK  G+ +T SLRG         +F +  +G +     L       
Sbjct: 1590 PIGTTLFNIYATDPDKTVGNLLTYSLRGQGITDVDPPLFIVEQTGVVKTNARLDRETKDV 1649

Query: 212  IQLVVVATDTGNP 224
             +   VATD G P
Sbjct: 1650 YEFSCVATDNGEP 1662



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 56/207 (27%), Positives = 93/207 (44%), Gaps = 24/207 (11%)

Query: 48   NEYSVSALENLPVNYVLLTVTTNKPRDLR---VKYWLSNDYGE--RFSI-SRQGDISLMQ 101
            N Y+ +  E+ P    +LTVT +   +     + Y L  D  +   F+I ++ G I+  +
Sbjct: 1043 NTYAPTIAEHQPSGSTVLTVTASDDDEGSFGLISYSLVLDANQPKHFNIDAKTGAITTNR 1102

Query: 102  CLDYETEDSYRFTVYATD--------TLMTTSATVNISVVNVNDWDPRFRYPQY-ELFLP 152
              D E +  Y  TV ATD         +M+   T N+ V ++ND  P F + QY    L 
Sbjct: 1103 EFDRERQSLYSITVRATDGGNNSSLSEVMSGFCTFNVRVTDINDNSPSFEFKQYFGSVLL 1162

Query: 153  HIPLADLTPGSVIGKVEAADGDKGDR--VTLSLRGPYEKMFSIND--SGHISIVDLSALN 208
            ++P+      + I  + A+D D G+   VT SL    + ++   D  +G +S       N
Sbjct: 1163 NVPI-----NTRIITLVASDNDTGNSGAVTYSLDQSDDALYFQIDPTNGILSTARSLDGN 1217

Query: 209  TSTIQLVVVATDTGNPPRQASVPAIMH 235
                + + VA D G PP Q+  P ++ 
Sbjct: 1218 KREYRFLAVAIDNGQPPLQSVAPVVIQ 1244



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 63/244 (25%), Positives = 111/244 (45%), Gaps = 19/244 (7%)

Query: 9   QPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVT 68
           Q I LVVRA+   N  + +   +I+ +     R  QF+++ Y  +  E+   N  +LTV 
Sbjct: 699 QRIQLVVRAVDKGNPPQTSDDAVILVRVEN--RPPQFTQSRYRATVAESQLRNLPILTVR 756

Query: 69  TNKPRDLRVKY-WLSNDYGERFSISRQ-GDISLMQCLDYETED-SYRFTVYATDTL---M 122
                   + Y  L+ +   RF+I+   G I+    LDYE +   Y  T+ AT++    +
Sbjct: 757 AISFSGRGIIYSILNGNVNSRFTINADTGLITAPFGLDYENDQHDYTLTIRATESEANPL 816

Query: 123 TTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTP-GSVIGKVEAADGDKG--DRV 179
           ++     I++ + ND  P+F   +YE   P   + +    G+ + +V A D D G   ++
Sbjct: 817 SSQVQATITITDSNDCTPQFTKTEYE---PSQAIPETASVGTQVVQVSATDCDSGTSGQL 873

Query: 180 TLSLRGPYEKMFSINDSGHISIVDLSALNTSTIQLVVVATDTGNPPR----QASVPAIMH 235
             S++  Y K+  ++ +  IS   L+  N      +V   D G P R    + ++P I  
Sbjct: 874 RYSIQSEYFKIDEVSGAVEIS-KQLNYENKQVYSFIVTVQDLGTPSRSSQARVTIPVIDT 932

Query: 236 FPEA 239
             EA
Sbjct: 933 NDEA 936



 Score = 47.4 bits (111), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 66/251 (26%), Positives = 109/251 (43%), Gaps = 36/251 (14%)

Query: 13  LVVRAIQYDNQD-RYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNK 71
           L+VRA+ +       A A+++V+    +    +FS+  Y     E+ PV   L+ +    
Sbjct: 286 LIVRAVDHGRLGYTTARASVMVTLRDVNDHPPEFSQTSYYTKIGEDAPVGTTLIQMNATD 345

Query: 72  P---RDLRVKYWL-------SNDYGERFSIS-RQGDISLMQCLDYETEDSYRFTVYATDT 120
           P    + ++ Y +       SN Y   F+I  +   I   + LDYE +  +  T+ A D 
Sbjct: 346 PDHGNNGQITYSIDSFGSPQSNSY---FAIDPKTAVIRTRRSLDYEQQRHHSITIRAVDG 402

Query: 121 LMTTS---ATVNISVVNVNDWDPRF--RYPQYELFLPHIPLADLTPGSVIGKVEAADGDK 175
              +    A V ++V + ND  P+F    P++      +P+     G VI ++ A D D 
Sbjct: 403 GTPSRQSLARVQVAVDDRNDNKPQFVADTPKFRFIFVTVPV-----GKVIARLTATDPDD 457

Query: 176 G--DRVTLSL--RGPYEKMFSIND-SGHISIVDLSALNTSTIQ--LVVVATDTGNPPRQA 228
           G   RVT SL      E  F ++  +G + +V    LN    Q  L + ATD G  P+  
Sbjct: 458 GANGRVTYSLVEDASKEGRFDVDSITGDVKVV--KPLNRIDFQYGLTIRATDGGTTPKYD 515

Query: 229 SVPAI--MHFP 237
            V     ++FP
Sbjct: 516 EVTLFIGINFP 526



 Score = 46.6 bits (109), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 58/212 (27%), Positives = 89/212 (41%), Gaps = 29/212 (13%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGER-----------FSIS 92
            QF+K  Y+    E+ P+   L  +    P D  V   L+  Y  R           F + 
Sbjct: 1575 QFTKFSYTARIKEDTPIGTTLFNIYATDP-DKTVGNLLT--YSLRGQGITDVDPPLFIVE 1631

Query: 93   RQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYEL 149
            + G +     LD ET+D Y F+  ATD     +++ A   + + +VND  P F    Y  
Sbjct: 1632 QTGVVKTNARLDRETKDVYEFSCVATDNGEPQLSSFADCRVYLDDVNDERPYFPDQPYIG 1691

Query: 150  FLPHIPLADLTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSIN-DSGHISI---VD 203
            +     L +  P   +  V A D D G+  R   SL    +  F+I+ D+G I     +D
Sbjct: 1692 YA----LENAPPPVNVRPVTALDNDIGNNSRFIYSLVDDADGTFTIDADNGMIKTQRQLD 1747

Query: 204  LSALNTSTIQLVVVATDTGNPPRQASVPAIMH 235
              A+   T+  +V ATD G PP    V  ++ 
Sbjct: 1748 REAVANYTV--IVRATDRGQPPLSGQVNVLIQ 1777



 Score = 41.6 bits (96), Expect = 0.73,   Method: Compositional matrix adjust.
 Identities = 55/190 (28%), Positives = 86/190 (45%), Gaps = 18/190 (9%)

Query: 44  QFSKNEYSVSALENLPVNY---VLLTVTTNKPRDLRVKYWLSNDY---GERFSIS-RQGD 96
           QF +  Y+ S  E+LP N    V+  +  + P +  V Y L          FSIS   G 
Sbjct: 112 QFEQVVYNTSLPESLPPNSFVTVVRAIDIDSPSNAIVTYSLDPSTITNPPTFSISANDGI 171

Query: 97  ISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
           +  ++ LD E    Y   V    T   TS  + I VV++ND  P F    Y + +P    
Sbjct: 172 VRTLRPLDRELRSYYELRVI---TSAQTSTLLTIRVVDINDNMPEFTSSNYFIEVPE--- 225

Query: 157 ADLTPGSVIGKVEAADGDKGD--RVTLSLRGP-YEKMFSIN-DSGHISIVDLSALNTSTI 212
            ++     +  + A D D+GD  R+  S+ G   + +FSI+  +G +S  +L+    S+ 
Sbjct: 226 -NMGYNPNLLCIHAVDHDEGDNARIIYSITGGNSDGLFSIHSQTGLLSAQNLNYEQRSSY 284

Query: 213 QLVVVATDTG 222
            L+V A D G
Sbjct: 285 LLIVRAVDHG 294



 Score = 40.0 bits (92), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 43/155 (27%), Positives = 69/155 (44%), Gaps = 12/155 (7%)

Query: 88  RFSIS-RQGDISLMQCLDYETEDSYRFTVYA---TDTLMTTSATVNISVVNVNDWDPRFR 143
           +F I+ R G I++   +D E    Y+        T  +  T+  V ++V++ ND  P F 
Sbjct: 573 QFKINPRTGLITVGATIDREANMKYKLITQVSPITSGIDFTTRIVEVTVIDFNDNKPIFT 632

Query: 144 YPQ-YELFLPHIPLADLTPGSVIGKVEAADGDKGDR--VTLSLRGPYEKMFSIND-SGHI 199
            P  YE  +    +     G+ + ++ A+D D+G    V   L       FS+N  +G I
Sbjct: 633 MPAPYEATVNENAVV----GTSVYRLRASDADEGSNSLVEYQLDPSSSGPFSVNPVTGVI 688

Query: 200 SIVDLSALNTSTIQLVVVATDTGNPPRQASVPAIM 234
           +           IQLVV A D GNPP+ +    I+
Sbjct: 689 TTTGAKLQLGQRIQLVVRAVDKGNPPQTSDDAVIL 723



 Score = 38.9 bits (89), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 38/143 (26%), Positives = 65/143 (45%), Gaps = 14/143 (9%)

Query: 44  QFSKNEYSVSALENLPVNYVLL---TVTTNKPRDLRVKYWLSNDYGER-FSISRQGDISL 99
           +F+ + Y +   EN+  N  LL    V  ++  + R+ Y ++    +  FSI  Q  +  
Sbjct: 213 EFTSSNYFIEVPENMGYNPNLLCIHAVDHDEGDNARIIYSITGGNSDGLFSIHSQTGLLS 272

Query: 100 MQCLDYETEDSYRFTVYATD----TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIP 155
            Q L+YE   SY   V A D       T  A+V +++ +VND  P F    Y     +  
Sbjct: 273 AQNLNYEQRSSYLLIVRAVDHGRLGYTTARASVMVTLRDVNDHPPEFSQTSY-----YTK 327

Query: 156 LADLTP-GSVIGKVEAADGDKGD 177
           + +  P G+ + ++ A D D G+
Sbjct: 328 IGEDAPVGTTLIQMNATDPDHGN 350


>gi|410948517|ref|XP_003980981.1| PREDICTED: protocadherin gamma-A10 [Felis catus]
          Length = 854

 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 68/196 (34%), Positives = 96/196 (48%), Gaps = 21/196 (10%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSN---DYGERFSISRQ-GDI 97
           F+  EY VS LENLPV   LLTVT    ++  +  V Y       D   +F +++  G+I
Sbjct: 242 FTLPEYRVSVLENLPVGTQLLTVTATDRDEGANGEVTYSFRKFVPDKLLKFQLNKNTGEI 301

Query: 98  SLMQCLDYETEDSYRFTVYATD-TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
            L + LDYE  D Y   + A D       A V I+V +VND +P        LF P   +
Sbjct: 302 KLSENLDYEETDFYELEIQAEDGGAYLAMAKVLITVEDVNDNNPEVTITS--LFSPL--M 357

Query: 157 ADLTPGSVIGKVEAADGDKGD--RVTLSLRG--PYEKMFSINDSGHISIVDLSALN---T 209
            D  PG++I  +   D D G   +VT S+ G  P++   SI+  G+  +V    L+    
Sbjct: 358 EDSPPGTIIALLNVHDPDSGQNGQVTCSISGNLPFKLEKSID--GYYRLVTHRTLDREQV 415

Query: 210 STIQLVVVATDTGNPP 225
           S+  + V ATD GNPP
Sbjct: 416 SSYNITVTATDGGNPP 431



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 71/277 (25%), Positives = 119/277 (42%), Gaps = 51/277 (18%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKP---RDLRVKYWLSNDYGERFSISR-------Q 94
           FS   Y     EN P    +L+VT   P    + +V Y L+ D  +   +S         
Sbjct: 452 FSHISYFTYIPENNPRGASILSVTALDPDSKENAQVIYSLAEDTFQEAPLSSYVSINSDT 511

Query: 95  GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFL 151
           G +  ++  DYE     +  V ATD+    ++++ +V+I V++ ND  P   YP      
Sbjct: 512 GVLYALRTFDYEQFHDLQIQVIATDSGDPPLSSNVSVSIFVLDQNDNAPEILYPT----- 566

Query: 152 PHIPL-----ADLTP-----GSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-DSG 197
             +P       +L P     G ++ KV A D D G    LS   L+     +F++   +G
Sbjct: 567 --LPTDTSTGMELAPRSSESGYLVTKVVAVDKDSGQNARLSYRLLKASEPGLFAVGLHTG 624

Query: 198 HI----SIVDLSALNTSTIQLVVVATDTGNPPRQASVPAIMHFPEAI---------VQQA 244
            +    +++D  AL  S   LVV   D G PP  A+V   +   ++I         ++  
Sbjct: 625 EVRTARALLDRDALKQS---LVVAVQDHGQPPLSATVTLTVAIADSIPDVLADLGSLEVP 681

Query: 245 SSKLNSGTSSTVLIILGVV-LIVLGFVIILLILYIHK 280
                SG +  +++ + +V  I L FVI+LL L + +
Sbjct: 682 RDSEASGLTLYLVVAVAIVSCIFLAFVIVLLALRLRR 718



 Score = 40.4 bits (93), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 44/147 (29%), Positives = 64/147 (43%), Gaps = 25/147 (17%)

Query: 101 QCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLA 157
           + LD E   SY  TV ATD     + T     + V ++ND  P F +  Y  ++P     
Sbjct: 408 RTLDREQVSSYNITVTATDGGNPPLLTETHFTVQVADINDNPPTFSHISYFTYIPE---- 463

Query: 158 DLTPGSVIGKVEAADGDKGD--RVTLSL------RGPYEKMFSINDSGHISIVDLSALNT 209
           +   G+ I  V A D D  +  +V  SL        P     SIN    +    L AL T
Sbjct: 464 NNPRGASILSVTALDPDSKENAQVIYSLAEDTFQEAPLSSYVSINSDTGV----LYALRT 519

Query: 210 ------STIQLVVVATDTGNPPRQASV 230
                   +Q+ V+ATD+G+PP  ++V
Sbjct: 520 FDYEQFHDLQIQVIATDSGDPPLSSNV 546


>gi|241735377|ref|XP_002413936.1| hypothetical protein IscW_ISCW022281 [Ixodes scapularis]
 gi|215507790|gb|EEC17244.1| hypothetical protein IscW_ISCW022281 [Ixodes scapularis]
          Length = 421

 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 81/274 (29%), Positives = 127/274 (46%), Gaps = 33/274 (12%)

Query: 9   QPITLVVRAIQY----DNQDR-YALATLIVSKAGTSLRELQFSKNEYSVSALEN-LPVNY 62
           +P TL++R   +    +  DR  ALA  +V +       L+F K EY  S +EN LP   
Sbjct: 83  RPGTLILRETDFPPSPERSDREQALAVHVVPQQSM----LRFPKEEYGASIVENGLPGAQ 138

Query: 63  V--LLTVTTNKPRDLRVKYWL-SNDYGERFSIS---RQGDISLMQC---LDYETEDSYRF 113
           V  L   TT+  RD  V+Y + S D    F +S   R     +++    LD ET++ Y  
Sbjct: 139 VAVLDGATTDSCRD-DVRYEIVSGDDDGAFHLSPLSRNSTRLVLRARTPLDRETQNRYDL 197

Query: 114 TVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADG 173
           T+ A + L +    V + V++VND DP    P+   +   +PL+   P S++G V A D 
Sbjct: 198 TIRAFNGLESARTRVVVEVLDVNDNDP---VPERRSYTFRVPLSS-EPYSIVGNVSATDS 253

Query: 174 DKGDRVTLSL--RGPYEKMFSINDSGHISIVDLSALNTSTIQLVVVATDTGNPPRQASVP 231
           D GD V   L  R P+  M  +  +G + +     L   T +L V   D G PPR+   P
Sbjct: 254 D-GDAVAFRLSDRHPFFTM--VPKTGELMLT--RGLEPKTYKLAVRLRDRGTPPRRG--P 306

Query: 232 AIMHFPEAIVQQASSKLNSGTSSTVLIILGVVLI 265
            +  + +A     ++  +S   S V I    +++
Sbjct: 307 TVAVYVDAFEPDEAAPASSQEDSVVRIRRSSIIV 340


>gi|449277761|gb|EMC85812.1| Cadherin-23, partial [Columba livia]
          Length = 3246

 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 61/195 (31%), Positives = 93/195 (47%), Gaps = 20/195 (10%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDLR---VKYWLSNDYGERFSIS-RQGDISLM 100
            FS+  Y  +  E++P+  V+L V        R   ++Y L +  G +F I+   GDI ++
Sbjct: 2324 FSQPSYQKAVFEDVPLGTVILRVKATDADSGRFALIQYSLGDGEG-KFGINPNTGDIYIL 2382

Query: 101  QCLDYETEDSYRFTVYATD-------TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
              LD E +D Y  T  A D            S  V I+V+++ND+ P+F   Q+   +  
Sbjct: 2383 SALDREKKDHYTLTAVARDNPGDISSNRRENSVQVLITVLDINDFRPQFSKSQFSTSV-- 2440

Query: 154  IPLADLTPGSVIGKVEAADGDKGDR--VTLSLRGPYEKMFSIN-DSGHISIVDLSALNTS 210
                +   G+ +  + A D D+GD   VT S+ GP  + F IN DSG I+       +  
Sbjct: 2441 --YENEPAGTSVITMTATDLDEGDNGMVTYSIEGPGAEAFKINKDSGLIT-SRRRLQSYE 2497

Query: 211  TIQLVVVATDTGNPP 225
               L VVATD G+PP
Sbjct: 2498 RFNLTVVATDKGHPP 2512



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 64/207 (30%), Positives = 101/207 (48%), Gaps = 22/207 (10%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRDL----RVKYWLSNDYGERFSISRQ-GDISL 99
           FSK  Y+VS  EN  V   +L V      D+    +V Y+ S+D  +RFS+ +  G I L
Sbjct: 410 FSKALYNVSLFENTTVGTTVLQVHATD-NDVGTYGKVSYFFSDD-PDRFSLDKDTGVILL 467

Query: 100 MQCLDYETEDSYRFTVYATDTL-MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLAD 158
              LD+ET   Y  T+ A D     T+  V I++++VND  P F   Q E +L  +   +
Sbjct: 468 TARLDFETTQRYTLTIIARDGGGEETTGRVRINILDVNDNVPTF---QKEAYLGALRENE 524

Query: 159 LTPGSVIGKVEAADGDKG--DRVTLSL--RGPYEKMFSI---NDSGHISI---VDLSALN 208
            +   V+ ++ A+D D    +++T S+     +   F I   +  G IS+   +D   + 
Sbjct: 525 PSVTQVV-RLRASDEDSSPNNQITYSIVQASAFRDYFDIAVLDGYGVISVNHPLDYEQVA 583

Query: 209 TSTIQLVVVATDTGNPPRQASVPAIMH 235
              I L V+A D GNPP  ++VP  + 
Sbjct: 584 NGVIYLTVMAKDAGNPPLNSTVPVTIE 610



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 63/213 (29%), Positives = 94/213 (44%), Gaps = 34/213 (15%)

Query: 45  FSKNEYSVSALENLPVNY-VLLTVTTNKPRDLRVKYWLSNDYGER-----------FSI- 91
           FSK  Y ++ +E++     VL    T+  R        S +YG+            F I 
Sbjct: 621 FSKASYVIAVMEDIMAGATVLFLNATDMDR--------SREYGQESIIYSLEGSSHFRIN 672

Query: 92  SRQGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFL 151
           +R G+I+    LD E +  Y   V A D  +       I++VN+   D    YP ++   
Sbjct: 673 ARSGEITTTSLLDREAKSEYILIVRAVDGGVGHHQKTGIAMVNITLLDINDNYPTWKDEP 732

Query: 152 PHIPLADLT-PGSVIGKVEAADGDKGDRVTL--SLRGPYEKMFSIND-SGHIS----IVD 203
             I L ++T P S +  V A D D G+  T+  S+R P  K +S+N  +G I     ++D
Sbjct: 733 YFINLVEMTPPNSDVTTVVAIDPDLGENGTVVYSIRPP-NKFYSLNSTTGKIRTTGVLLD 791

Query: 204 LSALNTSTIQL----VVVATDTGNPPRQASVPA 232
               NT   QL    VV  TD G PP +A+  A
Sbjct: 792 RENPNTQEAQLMRRIVVSVTDCGRPPLRATSSA 824



 Score = 44.3 bits (103), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 47/132 (35%), Positives = 64/132 (48%), Gaps = 13/132 (9%)

Query: 95  GDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHI 154
           G + L Q LD ET+  +      +D+      TVNI V +VND  PRF    Y + +P  
Sbjct: 37  GVVWLRQPLDRETKSEFTVEFSVSDSQGVIKGTVNIQVGDVNDNAPRFHNQPYSVRIP-- 94

Query: 155 PLADLTP-GSVIGKVEAADGDK--GDRVTLSLRGPYEKMFSINDSGH--ISIV-DLSALN 208
              + TP G+ I  V A D D+  G  V  S + P    F+I DSG   +S++ +L    
Sbjct: 95  ---ENTPVGTPIFIVNATDPDQGAGGSVLYSFQPP-SNFFAI-DSGRGIVSVIRELDYEV 149

Query: 209 TSTIQLVVVATD 220
           T   QL V ATD
Sbjct: 150 TQAYQLQVNATD 161



 Score = 43.1 bits (100), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 39/120 (32%), Positives = 58/120 (48%), Gaps = 13/120 (10%)

Query: 95   GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYE-LF 150
            G +   + +DYE      FTV A+D      +    V + +V++ND +P F  P Y+   
Sbjct: 2274 GKVVANRTVDYEEVQWLNFTVRASDNGSPRRSAEIPVYLQIVDINDNNPVFSQPSYQKAV 2333

Query: 151  LPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSIN-DSGHISIVDLSALN 208
               +PL     G+VI +V+A D D G    +    G  E  F IN ++G I I  LSAL+
Sbjct: 2334 FEDVPL-----GTVILRVKATDADSGRFALIQYSLGDGEGKFGINPNTGDIYI--LSALD 2386



 Score = 42.7 bits (99), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 41/145 (28%), Positives = 68/145 (46%), Gaps = 21/145 (14%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTTNKPRD-----LRVKYWLSNDYGERFSI-SRQGDI 97
           +F    YSV   EN PV   +  V    P       +   +   +++   F+I S +G +
Sbjct: 83  RFHNQPYSVRIPENTPVGTPIFIVNATDPDQGAGGSVLYSFQPPSNF---FAIDSGRGIV 139

Query: 98  SLMQCLDYETEDSYRFTVYATD----TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
           S+++ LDYE   +Y+  V ATD      ++T A + I++ +V D DP F      + LP+
Sbjct: 140 SVIRELDYEVTQAYQLQVNATDQDKNKPLSTLANLAITITDVQDMDPIF------INLPY 193

Query: 154 IP--LADLTPGSVIGKVEAADGDKG 176
                 +  PG+ +  + A D DKG
Sbjct: 194 STNIYENSPPGTTVRMITAIDQDKG 218



 Score = 41.6 bits (96), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 48/159 (30%), Positives = 74/159 (46%), Gaps = 15/159 (9%)

Query: 88   RFSIS-RQGDISLMQCLDYETEDSYRFTVYATDT-----LMTTSATVNISVVNVNDWDPR 141
            +FS+  R G +  +  LD ET  SY   + A D        T +ATV ++V++VND  P 
Sbjct: 992  KFSVGFRDGVVRTVVSLDRETVASYTLILEAIDNGPTGNRRTGTATVYVTVLDVNDNRPI 1051

Query: 142  FRYPQYELFLPH-IPLADLTPGSVIGKVEAADGDKGDRVTLS-LRGPYEKMFSINDSGHI 199
            F    YE+ +P  IP A     S++     AD     RV    ++G     F IN S  +
Sbjct: 1052 FLQSSYEVSVPEDIPAA----SSIVQAATDADEGVNGRVWYRIIKGNEHNHFRINPSTGL 1107

Query: 200  SIVDLSALN---TSTIQLVVVATDTGNPPRQASVPAIMH 235
             +  +  L+    S+  L V A +T   P ++SV  I++
Sbjct: 1108 VMRGVRHLDREQNSSHVLEVEAYNTEQGPMRSSVRVIVY 1146



 Score = 41.6 bits (96), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 40/138 (28%), Positives = 64/138 (46%), Gaps = 12/138 (8%)

Query: 45   FSKNEYSVSALENLPVNY-VLLTVTTNKPRDL--RVKYWLSNDYGERFSI-SRQGDISLM 100
            F     +V   EN P  + VL  + T+    L  ++ Y +     +RF I +  G I + 
Sbjct: 2003 FQPASITVRLRENSPPGFSVLQVMATDADSGLNQQLDYRIEGGSQDRFLIDTTTGVIRVA 2062

Query: 101  Q-CLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
               +D E  D+YR TV A D     ++ + TV++ + +VND  P F  P   + +P    
Sbjct: 2063 NISIDREERDAYRLTVVAVDQGTPALSGTTTVSLFIDDVNDCRPEFINPIQTVSVPE--- 2119

Query: 157  ADLTPGSVIGKVEAADGD 174
                PG+V+ +V A D D
Sbjct: 2120 -SAAPGTVVAEVTAIDRD 2136



 Score = 39.7 bits (91), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 54/208 (25%), Positives = 90/208 (43%), Gaps = 28/208 (13%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGERFSISRQGDI--S 98
            QFSK+++S S  EN P    ++T+T    ++  +  V Y +     E F I++   +  S
Sbjct: 2430 QFSKSQFSTSVYENEPAGTSVITMTATDLDEGDNGMVTYSIEGPGAEAFKINKDSGLITS 2489

Query: 99   LMQCLDYETEDSYRFTVYATDTL---MTTSATVNISVVNVNDWDPRFRYPQYELFL---P 152
              +   YE    +  TV ATD     +  +  +++ V+++ND  P F  P     L    
Sbjct: 2490 RRRLQSYE---RFNLTVVATDKGHPPLWGTTMLHVEVIDINDNRPVFVRPPNGTILHIKE 2546

Query: 153  HIPLADLTPGSVIGKVEAADGDKG-------DRVTLSLRGPYEKMFSIND-SGHI-SIVD 203
             IPL      S + +V A D D+G       + +         + FSI+  SG I + + 
Sbjct: 2547 EIPLR-----SNVYEVYATDKDEGLNGAVLYNLLKTGAGNKDWEYFSIDSVSGLIQTAMR 2601

Query: 204  LSALNTSTIQLVVVATDTGNPPRQASVP 231
            L     +   L++VA D G P  +   P
Sbjct: 2602 LDREKQAVYNLIIVACDQGQPAYETMQP 2629



 Score = 38.9 bits (89), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 37/154 (24%), Positives = 64/154 (41%), Gaps = 21/154 (13%)

Query: 93   RQGDISLMQCLDYETEDSYRFTVYATD--------TLMTTSATVNISVVNVNDWDPRFRY 144
            R G + +   L+ E   +Y  T+   D        ++   +A + ++V++VND  PRFR 
Sbjct: 2170 RTGAVKIKTPLNRELVATYEVTISVHDNASEVIDRSVSVPNAKLTVNVLDVNDNTPRFRP 2229

Query: 145  PQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSGHISIVDL 204
                 F   I L   T G+ +  + A D DKG    ++          + D     +V  
Sbjct: 2230 FGVTYFTERI-LEGATEGTTLISISAVDPDKGANGQITC---------LEDQSAGKVVAN 2279

Query: 205  SALNTSTIQ---LVVVATDTGNPPRQASVPAIMH 235
              ++   +Q     V A+D G+P R A +P  + 
Sbjct: 2280 RTVDYEEVQWLNFTVRASDNGSPRRSAEIPVYLQ 2313


>gi|194758613|ref|XP_001961556.1| GF14875 [Drosophila ananassae]
 gi|190615253|gb|EDV30777.1| GF14875 [Drosophila ananassae]
          Length = 3563

 Score = 68.9 bits (167), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 67/198 (33%), Positives = 98/198 (49%), Gaps = 21/198 (10%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTTNKPR---DLRVKYWLSNDYGERFSI-SRQGDISL 99
            +F  ++Y+ S  E+ P    +  +T +      + R+ Y L+N+   +F+I S  G I+ 
Sbjct: 1950 RFELSKYTASVQEDAPPGTRVAQITASDADLGVNARLVYSLANESQWQFAIDSSSGLITT 2009

Query: 100  MQCLDYETEDSYRFTVYATD----TLMTTSATVNISVVNVNDWDPRF-RYPQYELFLPHI 154
            +  LD E + SY F V ATD     + + S  V I V++VND  P F RYP      P I
Sbjct: 2010 IGKLDRELQASYSFMVVATDGGRYEVRSASVPVQIHVLDVNDNRPVFERYPYLGKVAPLI 2069

Query: 155  PLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKM---FSINDS-GHISIVD-LSAL 207
                  PG  + KV+A D D G    VT SL+G    +   F IN S G +S    L++ 
Sbjct: 2070 -----QPGQTLLKVQAHDEDLGANGEVTYSLKGDASGISGKFRINPSTGALSASQSLASE 2124

Query: 208  NTSTIQLVVVATDTGNPP 225
            +   +QL V+A D G PP
Sbjct: 2125 SGKLLQLEVIARDKGTPP 2142



 Score = 65.1 bits (157), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 64/214 (29%), Positives = 92/214 (42%), Gaps = 36/214 (16%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWL------------SNDYGERF 89
            F + EY V+  E+  +N  ++ V     +   + R+ Y +            S+D  + F
Sbjct: 1033 FEREEYFVNVSESRSINTQIIQVNASDLDTGNNARITYRIVDAGVDNVTTSSSSDVAQHF 1092

Query: 90   SI-SRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYP 145
             I    G I L   LD ET D Y+ TV ATD         A V I V++ ND DP+F+  
Sbjct: 1093 GIFPNSGWIYLRALLDRETRDRYQLTVLATDNGTPAAHAKARVVIRVLDANDNDPKFQRT 1152

Query: 146  QYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDS-------GH 198
            +YE  +      +L  GSV+G V A D D G+   +        + + N S       G 
Sbjct: 1153 KYEFRIEE----NLRRGSVVGVVTATDLDLGENAAVRY-----SLLTANSSFQVHPVTGE 1203

Query: 199  ISIVD-LSALNTSTIQLVVVATDTGNPPRQASVP 231
            IS  + L        +L+V A D G P R A VP
Sbjct: 1204 ISTREPLDRELREMYELIVEARDQGTPVRSARVP 1237



 Score = 55.1 bits (131), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 41/126 (32%), Positives = 65/126 (51%), Gaps = 10/126 (7%)

Query: 29  ATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGER 88
           AT++V+    +  E  F ++ Y+VS  EN PV   +L ++ + P D  V   ++   GE 
Sbjct: 592 ATVLVTIHDVNDNEPIFDQSFYNVSVAENEPVGRCILKISASDP-DCGVNAMVNYTLGEG 650

Query: 89  FS-------ISRQGDISLMQCLDYETEDSYRFTVYATDT-LMTTSATVNISVVNVNDWDP 140
           F         S  G+I +   LD+E   SY F V ATD   ++T+A + + + +VND  P
Sbjct: 651 FKHLTEFEVRSASGEICIAGELDFEKRSSYEFPVIATDRGGLSTTAMIKMQLTDVNDNRP 710

Query: 141 RFRYPQ 146
            F YP+
Sbjct: 711 VF-YPR 715



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 65/221 (29%), Positives = 96/221 (43%), Gaps = 30/221 (13%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTTNKPRDL----RVKYWLSNDYGER-FSI-SRQGDI 97
            +F  N   +S  EN  +   L     +  RD     +V Y L+ D G+R FSI +R G +
Sbjct: 927  EFETNMVRISVPENAELGAPLYAAHAHD-RDSGSSGQVTYSLARDSGKRLFSIDARSGHL 985

Query: 98   SLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHI 154
             L   LDYET   +  TV ATD     ++++ T+ + V +VND  P F   +Y + +   
Sbjct: 986  VLSHHLDYETSQRHTLTVTATDGGIPPLSSNLTILLDVQDVNDNPPVFEREEYFVNVSE- 1044

Query: 155  PLADLTPGSVIGKVEAADGDKG--------------DRVTLSLRGPYEKMFSI-NDSGHI 199
                 +  + I +V A+D D G              D VT S      + F I  +SG I
Sbjct: 1045 ---SRSINTQIIQVNASDLDTGNNARITYRIVDAGVDNVTTSSSSDVAQHFGIFPNSGWI 1101

Query: 200  SIVDLSALNT-STIQLVVVATDTGNPPRQASVPAIMHFPEA 239
             +  L    T    QL V+ATD G P   A    ++   +A
Sbjct: 1102 YLRALLDRETRDRYQLTVLATDNGTPAAHAKARVVIRVLDA 1142



 Score = 48.9 bits (115), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 64/241 (26%), Positives = 104/241 (43%), Gaps = 36/241 (14%)

Query: 18   IQYDNQDRYALATLIV--------SKAGTSLREL-------QFSKNEYSVSALENLPVNY 62
            +  + +DRY L  L          +KA   +R L       +F + +Y     ENL    
Sbjct: 1107 LDRETRDRYQLTVLATDNGTPAAHAKARVVIRVLDANDNDPKFQRTKYEFRIEENLRRGS 1166

Query: 63   VLLTVTTNK---PRDLRVKYWL--SNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYA 117
            V+  VT        +  V+Y L  +N   +   ++  G+IS  + LD E  + Y   V A
Sbjct: 1167 VVGVVTATDLDLGENAAVRYSLLTANSSFQVHPVT--GEISTREPLDRELREMYELIVEA 1224

Query: 118  TDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGD 174
             D    + +    V+I V +VND  P    PQ ++        +  PG+ + ++ A D D
Sbjct: 1225 RDQGTPVRSARVPVSIRVTDVNDNSPEIADPQEDVVSVR---EEQPPGTEVVRIRAIDRD 1281

Query: 175  KGDRVTLS---LRG---PYEKMFSIN-DSGHISI-VDLSALNTSTIQLVVVATDTGNPPR 226
             G   +++   ++G       +FSI+  +G I   V L     S  +L V ATD G+PPR
Sbjct: 1282 NGQNASITYSIVKGRDSDGHGLFSIDPKTGMIRTRVVLDHEERSIYRLGVAATDGGSPPR 1341

Query: 227  Q 227
            +
Sbjct: 1342 E 1342



 Score = 45.8 bits (107), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 59/193 (30%), Positives = 85/193 (44%), Gaps = 16/193 (8%)

Query: 45   FSKNEYSVSALENLP----VNYVLLTVTTNKPRDLRVKYWLSNDYGERFSI-SRQGDISL 99
            F K  Y+    E++P    V  V+ T      R        S D    FSI +  G+I +
Sbjct: 824  FEKARYNYYVKEDIPRGTVVGSVIATSGDTAHRSPMRYSIYSGDPDGYFSIEANSGNIRI 883

Query: 100  MQCLDYETEDSYRFTVYAT--DTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLA 157
             + LD+E +      + AT  +  +     VNI V +VND  P F      + +P    A
Sbjct: 884  AKPLDHEAKSQVLLNIQATVGEPPVYGHTQVNIEVEDVNDNAPEFETNMVRISVPEN--A 941

Query: 158  DLTPGSVIGKVEAADGDKGD--RVTLSL-RGPYEKMFSIN-DSGHISIVDLSALNTSTIQ 213
            +L  G+ +    A D D G   +VT SL R   +++FSI+  SGH+ +       TS   
Sbjct: 942  EL--GAPLYAAHAHDRDSGSSGQVTYSLARDSGKRLFSIDARSGHLVLSHHLDYETSQRH 999

Query: 214  -LVVVATDTGNPP 225
             L V ATD G PP
Sbjct: 1000 TLTVTATDGGIPP 1012



 Score = 45.1 bits (105), Expect = 0.061,   Method: Compositional matrix adjust.
 Identities = 62/223 (27%), Positives = 96/223 (43%), Gaps = 37/223 (16%)

Query: 22  NQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWL 81
           NQ RY       +  GTS+ ++  S  +    A EN  V Y +    ++K +  R+    
Sbjct: 284 NQSRYFATVPENATVGTSVLQVYASDTD----ADENGLVEYAINRRQSDKEKMFRID--- 336

Query: 82  SNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDW 138
                      R G I + + LD+ET++ +   V A D     + T+A V+I V +VND 
Sbjct: 337 ----------PRTGAIYINKPLDFETKELHELVVVAKDHGEQPLETTAFVSIRVTDVNDN 386

Query: 139 DPRFRYPQYELFL-----PHIPLADLTPGSVIGKVEAADGDKGDR---VTLSLRGP--YE 188
            P        +FL     P I  +   PG  + ++   D D       V +SL G   + 
Sbjct: 387 QPTINV----IFLSDDASPKISES-AQPGEFVARISVHDPDSKTEYANVNVSLNGGDGHF 441

Query: 189 KMFSINDSGHISIVDL--SALNTSTIQLVVVATDTGNPPRQAS 229
            + + ++S ++ IV+L       S   L VVATD G PP  AS
Sbjct: 442 ALTTRDNSIYLVIVNLPLDREMVSNYTLSVVATDKGTPPLHAS 484



 Score = 41.2 bits (95), Expect = 0.88,   Method: Compositional matrix adjust.
 Identities = 44/154 (28%), Positives = 72/154 (46%), Gaps = 13/154 (8%)

Query: 89   FSISR-QGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRF---RY 144
            F++ R  G + L + LDYE    Y+  V A+D       ++ I V + ND  P F   R 
Sbjct: 2484 FALDRYSGKLILKRHLDYEMNQEYQLEVIASDAAHEARTSLTIRVTDENDNAPVFLARRP 2543

Query: 145  PQYELFLPHI-PLAD-LTPGSVIGKVEAADGD-KGDRVTLS-LRGPYEKMFSINDSGHIS 200
            P Y   LP +  ++D L+    +  V A D D +G    +  L  P  K FS++ S  + 
Sbjct: 2544 PSYFAILPTMSEISDSLSTEVELLTVNATDADSEGSNSRIRYLIDPPVKGFSVHASSGVV 2603

Query: 201  IVDLSALN-----TSTIQLVVVATDTGNPPRQAS 229
             V++S+L      +    + ++A D G P  ++S
Sbjct: 2604 SVNMSSLQPPASPSGDYFVTILAKDEGKPSMKSS 2637



 Score = 40.8 bits (94), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 44/155 (28%), Positives = 67/155 (43%), Gaps = 22/155 (14%)

Query: 95   GDISLMQCLDYETEDSYRFTVYATDT------LMTTSATVNISVVNVNDWDPRFRYPQYE 148
            G +SL+  LD+E    Y   V A D        + TS TV + +V+VND  P F  P+  
Sbjct: 1545 GSLSLLAPLDFEAVPEYLLIVQALDQSSNVTERLQTSVTVRLRIVDVNDNAPHFVSPKAA 1604

Query: 149  LFL-PHIPLADLTP-GSVIGKVEAADGDKGD--RVTLSLRGPY-EKMFSINDSGHISIVD 203
                  I + D T  G V+  + A D D G+  R+T  + G   E  F IN      +++
Sbjct: 1605 NGKGASIFINDATRIGEVVAHIVAVDEDTGENGRITYEISGGNGEGRFRINP--QTGVIE 1662

Query: 204  LSAL---------NTSTIQLVVVATDTGNPPRQAS 229
            L+            +    L++ A D G P  ++S
Sbjct: 1663 LAKSLPPATEDEDKSGRFNLLITAKDHGEPEAKSS 1697



 Score = 40.0 bits (92), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 49/204 (24%), Positives = 84/204 (41%), Gaps = 21/204 (10%)

Query: 102  CLDYETEDSYRFTVYATDTLMTTSAT-VNISVVNVNDWDPRFRYPQYELFLPHIPLADLT 160
              DYE    Y   + A+D     +   V I + + +++ P+F    Y   LP      L 
Sbjct: 2935 VFDYEQRQRYDLQLEASDMGGKKARVGVRIEIESKDEFAPQFTERTYRFVLP--AAVALP 2992

Query: 161  PGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDSGHISIVDLSALNTS-------- 210
             G V+G+V A DGD G   RV   L  P+        SG I I     L++         
Sbjct: 2993 QGFVVGQVTATDGDSGPDGRVVYQLSAPHSNFKVNRSSGAILIKRKFKLDSDRDGNMYLD 3052

Query: 211  --TIQLVVVATDTGNPPRQASVPAIMHFPEAIVQQASSKLNSGTSSTVLIILGVVLIVLG 268
               I LVV A+ +G     +S+  +   P+ +    ++  ++G +S   +    + +++ 
Sbjct: 3053 GRQISLVVSAS-SGRHNSLSSMAVVEIAPDPLAHPGTNLASAGGASGGSMGDWAIGLLVA 3111

Query: 269  FVIIL-----LILYIHKNKHTKNN 287
            F++IL     + L+IH       N
Sbjct: 3112 FLLILCAAAGIFLFIHMRSRKPRN 3135



 Score = 39.7 bits (91), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 55/196 (28%), Positives = 93/196 (47%), Gaps = 22/196 (11%)

Query: 44  QFSKNEYSVSALENL-PVNYVLLTVTTNKPRDLR--VKYWLSND---YGERFSISRQ-GD 96
           +F ++ Y  + +E   P   VL  +  ++   L   + Y L+     + + F I  Q G 
Sbjct: 500 EFEQDLYHANVMEVADPGTSVLQVLAHDRDEGLNSVISYSLAETPETHAQWFQIDSQTGL 559

Query: 97  ISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
           I+    +D ETE   + TV A D     +++SATV +++ +VND +P F    Y     +
Sbjct: 560 ITTRSHIDCETEPVPQLTVIARDGGVPPLSSSATVLVTIHDVNDNEPIFDQSFY-----N 614

Query: 154 IPLADLTP-GSVIGKVEAADGDKG--DRVTLSLRGPYEKM--FSIND-SGHISIV-DLSA 206
           + +A+  P G  I K+ A+D D G    V  +L   ++ +  F +   SG I I  +L  
Sbjct: 615 VSVAENEPVGRCILKISASDPDCGVNAMVNYTLGEGFKHLTEFEVRSASGEICIAGELDF 674

Query: 207 LNTSTIQLVVVATDTG 222
              S+ +  V+ATD G
Sbjct: 675 EKRSSYEFPVIATDRG 690



 Score = 38.5 bits (88), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 42/140 (30%), Positives = 63/140 (45%), Gaps = 14/140 (10%)

Query: 96  DISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLP 152
           D+ +   LD ET   Y   + A D     +    TVNI++ +VND  P F   +Y   +P
Sbjct: 234 DLQISGFLDRETTPGYSLLIEALDGGSPPLRGFMTVNITIQDVNDNQPIFNQSRYFATVP 293

Query: 153 HIPLADLTPGSVIGKVEAADGDKGDRVTLSL-----RGPYEKMFSIN-DSGHISIVDLSA 206
                + T G+ + +V A+D D  +   +       +   EKMF I+  +G I I     
Sbjct: 294 E----NATVGTSVLQVYASDTDADENGLVEYAINRRQSDKEKMFRIDPRTGAIYINKPLD 349

Query: 207 LNTSTI-QLVVVATDTGNPP 225
             T  + +LVVVA D G  P
Sbjct: 350 FETKELHELVVVAKDHGEQP 369


>gi|301769907|ref|XP_002920372.1| PREDICTED: protocadherin Fat 4-like [Ailuropoda melanoleuca]
 gi|281339428|gb|EFB15012.1| hypothetical protein PANDA_009099 [Ailuropoda melanoleuca]
          Length = 4980

 Score = 68.9 bits (167), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 75/270 (27%), Positives = 122/270 (45%), Gaps = 44/270 (16%)

Query: 2    INEDD-----FLQPITLV---VRAIQYDNQDRYALATLIVSKAGTSLRELQ--------- 44
            +NEDD     FL P+T V    R + Y+ Q  Y L T+     G     ++         
Sbjct: 1880 VNEDDEDGIFFLNPVTGVFNLTRVLDYEAQQYYIL-TVRAEDGGGQFTTVRVYFNVLDVN 1938

Query: 45   -----FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWLSNDYG-ERFSISRQG 95
                 FS + YS S +ENLP+   +L        D    ++ Y +++  G  +F++ + G
Sbjct: 1939 DNPPIFSLSSYSTSLMENLPLGSTVLVFNVTDADDGINSQLAYSIASGDGLGQFTVDKNG 1998

Query: 96   DISLMQCLDYETEDSYRFTVYATDTLM------TTSATVNISVVNVNDWDPRFRYPQYEL 149
             + +++ LD E++  Y   V   D  M      T++A V+I +++VND  P F  P+   
Sbjct: 1999 VLKVLKSLDRESQSFYNLVVQVHDLPMLPASRFTSTAHVSIILLDVNDNPPTFLSPK--- 2055

Query: 150  FLPHIPLADLTP-GSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIND-SGHISIV-DL 204
             L +IP  + TP  +++ K +A D D G    +  +L  P    FSI    G + +  +L
Sbjct: 2056 -LTYIP--ENTPIDTIVFKAQATDPDSGPNSYIEYTLLNPLGNKFSIGTIDGEVRLTGEL 2112

Query: 205  SALNTSTIQLVVVATDTGNPPRQASVPAIM 234
                 S   L VVATD G P   +S   ++
Sbjct: 2113 DREEVSNYTLTVVATDKGQPALSSSTEVVV 2142



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 61/192 (31%), Positives = 92/192 (47%), Gaps = 24/192 (12%)

Query: 50   YSVSALENLPVNYVLLTVTTNKPRDLRV----KYWLSNDYGERFSIS-RQGDISLMQCLD 104
            +S    EN P+ Y +  VTT+   D+ +    +Y ++ D    F+I+   GDI + + L+
Sbjct: 2777 FSAYVPENSPLGYTVTRVTTSD-EDIGINAVSRYSIT-DTSLPFTINPSTGDIVISRPLN 2834

Query: 105  YETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSV 164
             E  D YR  V A D+  T S  V I V +VND  PRF  P Y L  P +P      GS 
Sbjct: 2835 REDTDRYRIRVSAHDSGWTVSTDVTIFVTDVNDNAPRFSRPSYYLDCPELPEI----GSK 2890

Query: 165  IGKVEAADGDKGD--RVTLSLRGPYEKMFSIN-DSGHI---------SIVDLSALNTSTI 212
            + +V A D D+G   +V   ++   E  F IN  +G I         ++   S +N +  
Sbjct: 2891 VTQVSATDPDEGSNGQVFYFIKSQSE-YFRINATTGEIFNKQVLKYQNVSGFSNVNINRH 2949

Query: 213  QLVVVATDTGNP 224
              +V ++D GNP
Sbjct: 2950 SFIVTSSDRGNP 2961



 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 56/183 (30%), Positives = 89/183 (48%), Gaps = 16/183 (8%)

Query: 56   ENLPVNYVLLTVTTNKPR---DLRVKYWLSNDYGERFSISR-QGDISLMQCLDYETEDSY 111
            EN P++ ++       P    +  ++Y L N  G +FSI    G++ L   LD E   +Y
Sbjct: 2061 ENTPIDTIVFKAQATDPDSGPNSYIEYTLLNPLGNKFSIGTIDGEVRLTGELDREEVSNY 2120

Query: 112  RFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKV 168
              TV ATD     +++S  V + V+++ND +P F  P Y++ +    L     G+ I +V
Sbjct: 2121 TLTVVATDKGQPALSSSTEVVVMVLDINDNNPVFVQPLYKVEINENTLT----GTDIIQV 2176

Query: 169  EAADGDKGDRVTLS---LRGPYEKMFSIND-SGHISIVD-LSALNTSTIQLVVVATDTGN 223
             AADGD+G    +    + G   + F I+  +G I++   L    T T  L V A D G+
Sbjct: 2177 YAADGDEGTNGQVRYGIVDGNANQEFRIDSVTGAITVAKPLDREKTPTYSLTVQAADRGS 2236

Query: 224  PPR 226
             PR
Sbjct: 2237 TPR 2239



 Score = 58.2 bits (139), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 47/158 (29%), Positives = 82/158 (51%), Gaps = 13/158 (8%)

Query: 87   ERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRF 142
             +F+I S  G ++L+  LDYE   +Y   + A D+    + ++ T+NI +++ ND  P F
Sbjct: 1256 RQFAIDSTSGQVTLIGKLDYEATPAYSLVIQAVDSGAVSLNSTCTLNIDILDENDNTPSF 1315

Query: 143  RYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTL--SLRGPY-EKMFSIN-DSGH 198
              P+  LF+    L ++  G ++  V A D D GD   L  S+ G      FSI+ ++G 
Sbjct: 1316 --PKSTLFVD--VLENMRIGELVSSVTATDSDSGDNADLHYSITGTNNHGTFSISPNTGS 1371

Query: 199  ISIVDLSALNTSTI-QLVVVATDTGNPPRQASVPAIMH 235
            I +       T ++ +L + A D G PPR +++  ++H
Sbjct: 1372 IFLAKKLDFETQSLYKLNITAKDQGRPPRSSTMSVVIH 1409



 Score = 55.5 bits (132), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 34/101 (33%), Positives = 49/101 (48%), Gaps = 5/101 (4%)

Query: 77   VKYWLSNDYGERFSIS-RQGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNV 135
            V Y + +   + F I    GD+   + LD E    Y   V A D L ++   +NI+V +V
Sbjct: 1775 VTYTIISGADDSFRIDPESGDLIATKRLDRERRSKYSLLVRADDGLQSSDMRINITVSDV 1834

Query: 136  NDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG 176
            ND  P+F  P Y   +P     D TPGS++  + A D D G
Sbjct: 1835 NDHIPKFSRPVYSFDIPE----DTTPGSLVAAILATDDDSG 1871



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 48/175 (27%), Positives = 79/175 (45%), Gaps = 32/175 (18%)

Query: 89   FSISRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYP 145
            F++S  G++ ++Q LD ET++ +   + ATD+    +T + T+N+ V ++ND  P F   
Sbjct: 2308 FTLSASGELRVIQSLDRETKEHFVLMITATDSGSPALTGTGTINVIVDDINDNVPTFASK 2367

Query: 146  QYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSGHISIVDLS 205
             Y   +P     D   G+ +  V A+D D      + + G     F+IN S    I+  +
Sbjct: 2368 MYFTTIPE----DAPTGTDVLLVNASDADASTNAVIRIIGG-NSQFTINPSTG-QIITSA 2421

Query: 206  ALNTSTIQ---LVVVATDTG--------------------NPPRQASVPAIMHFP 237
             L+  T +   LVVV++D G                    NPPR    P + H P
Sbjct: 2422 LLDRETKENYTLVVVSSDAGSPEPLSSSTSVLVTVTDVNDNPPRFQHHPYVTHIP 2476



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 73/237 (30%), Positives = 105/237 (44%), Gaps = 22/237 (9%)

Query: 11  ITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNE-YSVSALENLPVNYVLLTVTT 69
           I L + A       +++ A L+V+    +  +  FS+ E Y VS +EN P    LL +  
Sbjct: 548 IVLNISARDQGVHPKFSYAQLVVTLLDVNDEKPVFSQPEGYDVSVVENAPTGTELLVLRA 607

Query: 70  NKPRDL----RVKYWLSNDYGERFSISR---QGDISLMQCLDYETEDSYRFTVYATD--- 119
              RDL     V++ L     ++ S       G +S +  LD E +  Y   V ATD   
Sbjct: 608 TD-RDLGDNGTVRFSLQEAETDQRSFRLDPVSGKLSTIASLDREEQAFYSLLVLATDLGS 666

Query: 120 TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRV 179
              ++   +N+S+++VND  P F   QY     HI   +   GS I  V A D D G   
Sbjct: 667 PPQSSMVRINVSLLDVNDNSPVFYPIQY---FAHI-QENEPGGSYITTVSATDPDLGLNG 722

Query: 180 TL--SLRGPYEKMFSIN-DSGHISI-VDLSALNTSTIQLVVVATDTGN--PPRQASV 230
           T+  S+       F +N  SG IS  + L     +  QL +VATD GN   P QA V
Sbjct: 723 TIKYSISAGDRSRFQVNAQSGVISTRMALDREEKTAYQLQIVATDGGNLQSPNQAIV 779



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 58/198 (29%), Positives = 87/198 (43%), Gaps = 24/198 (12%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLS-NDYGERFSISRQGDISLM 100
            F +  Y V+  E+ PVN     V     +   +  + Y ++  + G+ F I   G + + 
Sbjct: 996  FDQLSYEVTLSESEPVNSRFFKVQAFDKDSGANGEIAYSIAEGNTGDAFGIFPDGQLYIK 1055

Query: 101  QCLDYETEDSYRFTVYATDTLMTT-SATVNISVV--NVNDWDPRFRYPQYELFLPHIPLA 157
              LD E +D Y   V A+D  +   SATVN++V+  +VND  P F    Y  +      A
Sbjct: 1056 SELDRELQDRYVLLVVASDRAVEPLSATVNVTVILEDVNDNRPLFNSTNYTFYFEEEQRA 1115

Query: 158  DLTPGSVIGKVEAADGDKGD----RVTLSLRGPYEKMFSINDSGHIS---IVDLSAL--- 207
                GS +GKV A D D G     R +  +  P   + +I  SG I+     D  +L   
Sbjct: 1116 ----GSFVGKVNAIDKDFGPNGEVRYSFEMVQPDFVLHAI--SGEITNTRQFDRESLMRQ 1169

Query: 208  -NTSTIQLVVVATDTGNP 224
              T+     V+ATD G P
Sbjct: 1170 RGTAVFSFTVIATDQGLP 1187



 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 49/187 (26%), Positives = 95/187 (50%), Gaps = 12/187 (6%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRDLR--VKYWLS-NDYGERFSISR-QGDISLM 100
           FS+  YS    EN+ + Y + +V+ +   DL   + Y ++  D    F+I++  G ++  
Sbjct: 793 FSQAAYSFVVFENVALGYHVGSVSAST-MDLNSNISYLITTGDQKGMFAINQVTGHLTTA 851

Query: 101 QCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLT 160
             +D E +  Y+  V A+   +T    VNI+V ++ND  P F      + +    + +  
Sbjct: 852 SVIDREEQSFYQLKVVASGGTVTGDTMVNITVKDLNDNSPHFLQAVESVNV----VENWQ 907

Query: 161 PGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIND-SGHISIVDLSALNTSTIQLVVV 217
            G  I + +A D D+G    V  SL+   + +F+IN+ +G+IS++    ++  + Q+ ++
Sbjct: 908 AGHSIFQAKAVDPDEGVNGMVLYSLKQNPKNLFTINEKNGNISLLGPLDVHAGSYQIEIL 967

Query: 218 ATDTGNP 224
           A+D G P
Sbjct: 968 ASDMGVP 974



 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 55/190 (28%), Positives = 94/190 (49%), Gaps = 15/190 (7%)

Query: 56   ENLPVNYVLLTVTTNKPRDLRVKYWL-SNDYGERFSISR-QGDISLMQCLDYETEDSYRF 113
            EN PV  ++ T+T +  R   + Y++ S + G  F I +  G +S+ Q LD+E    Y  
Sbjct: 2578 ENQPVGTLVTTITGSSLRGEPLSYYIASGNLGSTFLIDQLTGQVSISQPLDFEKIQKYVI 2637

Query: 114  TVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEA 170
             + A D     +++   ++++V++VND  P F+    + F+  I L +L+P  ++  V A
Sbjct: 2638 WIEARDGGFPPLSSYEKLDLTVLDVNDNSPVFK---EDPFVSEI-LENLSPRKIL-TVSA 2692

Query: 171  ADGDKGDRVTLS---LRGPYEKMFSINDS-GHI-SIVDLSALNTSTIQLVVVATDTGNPP 225
             D D G    L    + G  E  F+IN + G I SI  L         L + ++D G+P 
Sbjct: 2693 MDKDSGPNGQLDYEIVNGNKEHSFAINHATGEIRSIRPLDREKIPQYVLTIKSSDKGSPS 2752

Query: 226  RQASVPAIMH 235
            +  SV  I++
Sbjct: 2753 QSTSVKVIIN 2762



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 48/160 (30%), Positives = 86/160 (53%), Gaps = 16/160 (10%)

Query: 76   RVKYWL-SNDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATD---TLMTTSATVNI 130
            +V+Y +   +  + F I S  G I++ + LD E   +Y  TV A D   T  T ++TV+I
Sbjct: 2188 QVRYGIVDGNANQEFRIDSVTGAITVAKPLDREKTPTYSLTVQAADRGSTPRTDTSTVSI 2247

Query: 131  SVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPY 187
             ++++ND+ P F    Y + +P   L  L P +++ +V A D D+G    LS     G  
Sbjct: 2248 VLLDINDFVPTFELSPYSVNVPE-NLGTL-PRTIL-QVVARDDDQGSNSKLSYVLFGGNE 2304

Query: 188  EKMFSINDSGHISIVDLSALNTSTIQ---LVVVATDTGNP 224
            +  F+++ SG + ++   +L+  T +   L++ ATD+G+P
Sbjct: 2305 DNAFTLSASGELRVI--QSLDRETKEHFVLMITATDSGSP 2342



 Score = 47.4 bits (111), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 46/149 (30%), Positives = 70/149 (46%), Gaps = 12/149 (8%)

Query: 95   GDISLMQCLDYETEDSYRFTVYATDT----LMTTSATVNISVVNVNDWDPRFRYPQYELF 150
            G I     LD ET+++Y   V ++D      +++S +V ++V +VND  PRF   Q+  +
Sbjct: 2415 GQIITSALLDRETKENYTLVVVSSDAGSPEPLSSSTSVLVTVTDVNDNPPRF---QHHPY 2471

Query: 151  LPHIPLADLTPGSVIGKVEAADGDKGDRVTL--SLRGPYEKMFSINDSGHISIVDLSALN 208
            + HIP +   PGS +  V   D D G    L  SL G   + F I D    +I+    LN
Sbjct: 2472 VTHIP-SPTPPGSFVFAVTVTDADIGPNSELHYSLSGRNSEKFHI-DPLRGAIMAAGPLN 2529

Query: 209  -TSTIQLVVVATDTGNPPRQASVPAIMHF 236
              S +   V   D G+ P+  S    + F
Sbjct: 2530 GASEMTFSVHVKDGGSFPKTDSTTVTVRF 2558



 Score = 46.6 bits (109), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 40/140 (28%), Positives = 67/140 (47%), Gaps = 13/140 (9%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGERFSIS-RQGDISLM 100
            F  +EY  + LEN P    ++ +     +   +  + Y + +   + F I    G I+  
Sbjct: 3194 FFPDEYFPTVLENAPSGTTVIHLNATDADSGTNAVIAYTIQSSDSDLFVIDPNTGVITTQ 3253

Query: 101  QCLDYETEDSYRFTVYA---TDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLA 157
              LD+ET+ SY  TV A    D    + ATVNI +   N++ PRF    Y     +  ++
Sbjct: 3254 GFLDFETKQSYHLTVKAFNVPDEERCSFATVNIQLKGTNEYVPRFVSKLY-----YFEIS 3308

Query: 158  DLTP-GSVIGKVEAADGDKG 176
            +  P G+++G+V A+D D G
Sbjct: 3309 EAAPKGTIVGEVFASDRDLG 3328



 Score = 43.1 bits (100), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 41/142 (28%), Positives = 72/142 (50%), Gaps = 14/142 (9%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLR----VKYWLSNDYGER-FSI-SRQGDI 97
            +FS+N  S +  E+  +  ++ TV+  + RD      + Y +S+   E  F+I S  G +
Sbjct: 3088 EFSQNHMSATIPESHGIGAIVRTVSA-RDRDAAMNGLISYSISSGNEEGIFAINSSTGVL 3146

Query: 98   SLMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHI 154
            +L + LDYE    +  T+ ATD      T   +V ++V++VND  P F +P  + + P +
Sbjct: 3147 TLAKALDYELCQKHEMTISATDGGWVSRTGYCSVTVNVIDVNDNSPVF-FP--DEYFPTV 3203

Query: 155  PLADLTPGSVIGKVEAADGDKG 176
             L +   G+ +  + A D D G
Sbjct: 3204 -LENAPSGTTVIHLNATDADSG 3224



 Score = 40.4 bits (93), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 55/108 (50%), Gaps = 7/108 (6%)

Query: 89   FSISRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYP 145
            FS+S  G +S  + +D E    +  +V   D+    M+++ TV+I+V++ ND   + R  
Sbjct: 3558 FSLSTAGVLSTTREIDREQIADFYLSVITRDSGVPQMSSTGTVHITVIDQNDNPSQSR-- 3615

Query: 146  QYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSI 193
              E+F+ +    +L PG ++G V+  D D  D    SL      +FSI
Sbjct: 3616 TVEIFVNY--YGNLFPGGILGSVKPQDPDVLDTFHCSLTSGVTSLFSI 3661


>gi|405971222|gb|EKC36072.1| Protocadherin-11 X-linked [Crassostrea gigas]
          Length = 1006

 Score = 68.9 bits (167), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 73/263 (27%), Positives = 125/263 (47%), Gaps = 23/263 (8%)

Query: 45  FSKNEYSVSALENLPVNYVLLTV-TTNKP--RDLRVKYWLSNDYGER-FSIS-RQGDISL 99
           F+K+ Y+   +EN   ++V+ TV  T+K    +  + Y L   Y    FSI+   G+I  
Sbjct: 565 FNKSSYNFQVMENKNADFVVGTVLATDKDIGSNAAIVYTLPFSYQNAPFSINPSTGEIKT 624

Query: 100 MQCLDYETEDSYRFTVYATDTLMT---TSATVNISVVNVNDWDPRFRYPQY---ELFLPH 153
            + LD E + SY  +V ATD  ++   +S TV ++V++ ND  P  R+P      + +PH
Sbjct: 625 NRRLDREAKPSYTLSVMATDRGVSPKNSSCTVTVTVLDENDEYPHIRFPNRGNESIKVPH 684

Query: 154 IPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-DSGHISIV-DLSALN 208
             L    P S++ +VEA D D+G+  TL    ++   + +F I+  +G I +   + + +
Sbjct: 685 TTL----PNSIVTQVEAYDKDEGENGTLRYSIVKRDDDNLFYIDAKTGQIYLFRKIESFD 740

Query: 209 TSTIQLVVVATDTGNPPRQASVPAIMHFP-EAIVQQASSKLNSGTSSTVLIILGVVLIVL 267
                L +  +D G  P +  V   +     AI   A  K+  G +  + I +  V IVL
Sbjct: 741 IKEFSLFIDVSDQGAVPLKTGVEVRLFVEYHAIPTVAEQKI--GQNVLIAITIACVTIVL 798

Query: 268 GFVIILLILYIHKNKHTKNNGPP 290
              I++ I  I +  + K    P
Sbjct: 799 SLAILVTIFLIKRVDNNKRKRLP 821



 Score = 65.1 bits (157), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 81/168 (48%), Gaps = 25/168 (14%)

Query: 86  GERFSISRQGDISLMQCLDYETEDSYRFTVYATDTLM---TTSATVNISVVNVNDWDPRF 142
           G +   + + ++ L Q LD E   SYR  + A D  +   +++ T+N++V ++ND  PRF
Sbjct: 188 GRKIDETLEVNLVLTQKLDREKVRSYRVYLVAKDGGLPQRSSTMTINVAVQDINDNKPRF 247

Query: 143 RYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR------GPYEKMFSINDS 196
            Y QY + +      D+T G+ I KV A+D D G    +  +      G  +K+FSIN+ 
Sbjct: 248 SYSQYNVTIQE----DITVGTTIMKVSASDDDDGQNGVVEYQFSSTPNGESQKLFSINN- 302

Query: 197 GHISIVDLSALNTSTIQLVVVATDTGNPPRQASVPAIMHFPEAIVQQA 244
                      NT  ++++   T T   P +  V AI H   A+  QA
Sbjct: 303 -----------NTGEVKVIQQLTFTSGEPHRIVVSAIDHGFPALSSQA 339



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 62/216 (28%), Positives = 95/216 (43%), Gaps = 21/216 (9%)

Query: 30  TLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVT---TNKPRDLRVKYWLSNDYG 86
           + IV    T+  E +F ++ Y+ +  EN     ++  VT   +++  +  V Y +  ++ 
Sbjct: 445 SFIVQVLDTNDNEPKFDRDLYNATITENKAPGQMITKVTASDSDQENNAEVHYAIEPNFR 504

Query: 87  ERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDT----LMTTSATVNISVVNVNDWDPR 141
            +F + S  G I      D E E S  F VYA D      +T +ATV +++ + ND  P 
Sbjct: 505 SKFEVDSSTGIIRAKVEFDREQESSITFKVYAADNGTPVPLTATATVKLNIEDDNDEFPT 564

Query: 142 FRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKM---FSINDS-G 197
           F    Y   +     AD     V+G V A D D G    +    P+      FSIN S G
Sbjct: 565 FNKSSYNFQVMENKNADF----VVGTVLATDKDIGSNAAIVYTLPFSYQNAPFSINPSTG 620

Query: 198 HISI---VDLSALNTSTIQLVVVATDTGNPPRQASV 230
            I     +D  A  + T  L V+ATD G  P+ +S 
Sbjct: 621 EIKTNRRLDREAKPSYT--LSVMATDRGVSPKNSSC 654


>gi|241811212|ref|XP_002414573.1| cadherin-repeats domain-containing protein [Ixodes scapularis]
 gi|215508784|gb|EEC18238.1| cadherin-repeats domain-containing protein [Ixodes scapularis]
          Length = 2790

 Score = 68.9 bits (167), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 51/170 (30%), Positives = 78/170 (45%), Gaps = 5/170 (2%)

Query: 6    DFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLL 65
            D  +   ++V+A    N   + L+ + +    ++     FSK  YS S  ENLP  +  L
Sbjct: 940  DRKKQFVMLVQAKDSHNTPLFGLSMVTIDVLDSNDHAPTFSKTAYSASLPENLPSGHCFL 999

Query: 66   TVTTNKPRDL-RVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDTLMTT 124
            ++  +    + +V Y + N         R GD+   Q LD E  DSY F V A+D     
Sbjct: 1000 SIQASSGDSVDQVTYEILNKDIPFTVNGRTGDVCTSQVLDRERRDSYEFAVAASDGKFDM 1059

Query: 125  SATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGD 174
             A V+I VV+ ND  PRF   +Y + +PH    D   G  + ++ A D D
Sbjct: 1060 KAPVSIEVVDENDNPPRFEKERYSVSIPH----DSQAGRSVIQLHAIDLD 1105



 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 50/169 (29%), Positives = 79/169 (46%), Gaps = 12/169 (7%)

Query: 77  VKYWLS--NDYGERFSISRQGDISLMQCLDYETEDS---YRFTVYATD----TLMTTSAT 127
           V +W+   ND G+ +     G++ LM  +D +  DS   +R  V+A D    T   TS  
Sbjct: 592 VTFWIGEGNDLGKFWINPSTGELVLMDKVDRDPPDSQVQFRLKVFARDLQSITPYNTSVP 651

Query: 128 VNISVVNVNDWDPRFRYPQYELFLPH-IPLADLTPGSVIGKVEAADGDKGDRVTLSLRGP 186
           V I V+++ND  P F   ++ L LP  +PL    P     + +   G  G  V     G 
Sbjct: 652 VIIDVLDINDNAPSFGEEKFALELPESLPLGTELPAFYRAR-DIDAGPNGQIVRFMTEGA 710

Query: 187 YEKMFSINDSGHISIV-DLSALNTSTIQLVVVATDTGNPPRQASVPAIM 234
            +K F  N +G ++++ +L      T + VV+A D G PP+  S   I+
Sbjct: 711 EDKFFVNNVTGALTLISELDYETADTHEFVVLAMDGGTPPKTGSASIII 759



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 51/192 (26%), Positives = 100/192 (52%), Gaps = 21/192 (10%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRDL------RVKYWLSNDYGERFSISR-QGDI 97
           F + ++++   E+LP+   L      + RD+      ++  +++    ++F ++   G +
Sbjct: 666 FGEEKFALELPESLPLGTELPAFY--RARDIDAGPNGQIVRFMTEGAEDKFFVNNVTGAL 723

Query: 98  SLMQCLDYETEDSYRFTVYATDTLM---TTSATVNISVVNVNDWDPRFRYPQYELFLPHI 154
           +L+  LDYET D++ F V A D      T SA++ ISV N+N++ P F    Y  ++   
Sbjct: 724 TLISELDYETADTHEFVVLAMDGGTPPKTGSASIIISVQNINEFSPEFVGYPYNFYVAE- 782

Query: 155 PLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSI-NDSGHISI-VDLSALNTSTI 212
              +   G+ +G+++A D D G+++  ++     + F I +D+G + +  +L +  + TI
Sbjct: 783 ---NAARGTSVGQIQATDKD-GNKIVYAISDGDAEYFGIESDTGKLYVKKNLESRTSYTI 838

Query: 213 QLVVVATDTGNP 224
             VV ATD G P
Sbjct: 839 --VVTATDNGVP 848



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 59/203 (29%), Positives = 89/203 (43%), Gaps = 27/203 (13%)

Query: 45   FSKNEYSVSALENLPVNY--------VLLTVTTNKPRDLRVKYWL--SNDYGERFSIS-R 93
            F K EYS + LE    NY        VL  V  ++ ++  V Y +    D    F +   
Sbjct: 2118 FVKPEYSFTILEG---NYKEQRSRLGVLRAVDDDRGKNGAVDYAIISRKDQNLPFHVDVH 2174

Query: 94   QGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELF 150
             G++     LD ET+ +Y F V A D       ++  V +++ + ND  PRF    Y   
Sbjct: 2175 TGELFATGVLDRETKFNYYFHVLALDNGDPPQNSTVNVTVTIEDANDEKPRFFTDPY--- 2231

Query: 151  LPHIPLADLTPGSVIGKVEAADGDKGDR--VTLSLRGPYEKMFSINDSGHISIVDLSALN 208
            L  IP  +L PG  + ++ A D D G+   V   L G ++  F I DS   ++  LS L+
Sbjct: 2232 LAQIP-ENLDPGQKVTQIRAFDPDTGENGLVFYKLGGGHDNKFYI-DSKDGTVWTLSKLD 2289

Query: 209  TSTIQ---LVVVATDTGNPPRQA 228
                +   + V+A D G P   A
Sbjct: 2290 FEKQEFYNMTVIAYDQGKPSMSA 2312



 Score = 46.2 bits (108), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 46/157 (29%), Positives = 75/157 (47%), Gaps = 15/157 (9%)

Query: 77   VKYWLSNDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISV 132
            V Y L   +  +F I S+ G +  +  LD+E ++ Y  TV A D     M+  A + ++V
Sbjct: 2261 VFYKLGGGHDNKFYIDSKDGTVWTLSKLDFEKQEFYNMTVIAYDQGKPSMSAMAKLWVTV 2320

Query: 133  VNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYE-KMF 191
             + ND  P F    Y L +      +   G V+  ++A  G+       +L  P E   F
Sbjct: 2321 TDRNDVVPEFPKSVYTLEVAE----NTRVGDVVYTLDAGPGN----FLYTLDNPQEVDTF 2372

Query: 192  SIN-DSGHISIVD-LSALNTSTIQLVVVATDTGNPPR 226
            S+   +G I +   L +++ S  +LVV ATD G+PP+
Sbjct: 2373 SVEPHNGEIRLAKALDSIHQSHYRLVVSATDDGDPPK 2409



 Score = 45.4 bits (106), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 36/138 (26%), Positives = 58/138 (42%), Gaps = 24/138 (17%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGERFSISRQ------ 94
            QF K  Y     EN PV  ++ TV     + P++  + Y  +        +SR+      
Sbjct: 1704 QFEKEAYYEFVSENAPVGTIVDTVKATDPDSPQNTNMTYSFAR-------LSRRVPFMID 1756

Query: 95   ---GDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFL 151
               G +++ + LD      Y   V A D L  T+  + I V    + DPRF    Y+   
Sbjct: 1757 PILGTVNITRALDISESQEYSLEVQANDGLWKTTTAMKIYVSEAEERDPRFDQLHYKF-- 1814

Query: 152  PHIPLADLTPGSVIGKVE 169
                + +  PG+V+G+VE
Sbjct: 1815 ---KVLENVPGAVVGQVE 1829



 Score = 43.5 bits (101), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 51/219 (23%), Positives = 95/219 (43%), Gaps = 19/219 (8%)

Query: 17  AIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLR 76
           A + +++ R A+A + V+    +    +F    Y     E+LP   ++  V+    +DL 
Sbjct: 220 AARSEHERRTAVAVVHVNVTDVNNNVPEFVGAPYEAQVGESLPAGALVTQVSA---KDLD 276

Query: 77  VKYWLS------NDYGERFSISR-QGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVN 129
               L+      ND  E F ++   G I+    LD+E + SY   V  +D   T  + + 
Sbjct: 277 ANTALTYSIIAGND-DETFHMNPFTGVITSGTVLDFEKKQSYDLLVQVSDGFNTAVSPLT 335

Query: 130 ISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTL--SLRGPY 187
           + VV++ND  P F +  Y   +    + ++T    +G + A D D G    +  ++ G +
Sbjct: 336 VHVVDINDQQPVFTHNYYNFSV----VEEMTENVTVGTIRAIDRDSGRNAAIRYTILGDH 391

Query: 188 EKMFSINDSGH--ISIVDLSALNTSTIQLVVVATDTGNP 224
                + D G   ++   L     S ++ +V+A D G P
Sbjct: 392 ANNALLVDEGGNIVTKRSLDRERESKLEFLVIAFDGGIP 430



 Score = 43.1 bits (100), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 47/169 (27%), Positives = 79/169 (46%), Gaps = 15/169 (8%)

Query: 21  DNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLL---TVTTNKPRDLRV 77
           DN  RYALA + VS    +     F  + Y+++ +ENLP  + ++    V  +   +   
Sbjct: 2   DNSLRYALAKVEVSVMDINDNVPVFDYDMYNITVMENLPPGFTVVQVHAVDRDSGDNADF 61

Query: 78  KYWLSNDYGERFSISRQGDISLMQ--CLDYETEDSYRFTVYATDT-------LMTTSATV 128
            Y L +D G      ++G I +     LD E  D     V A +           ++A V
Sbjct: 62  LYHLIDDTGGFTIDEKEGWIRVRDPAKLDREKVDKLTMRVLALERKPNVNPDAKASTAVV 121

Query: 129 NISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGD 177
            +S+++ ND +P+F  P+  +++  +   D  PG+VIG V A D D G+
Sbjct: 122 EVSLLDANDNNPQF-LPE-GVYIFSVTETD-PPGTVIGSVVAVDPDMGE 167


>gi|195501765|ref|XP_002097933.1| GE10074 [Drosophila yakuba]
 gi|194184034|gb|EDW97645.1| GE10074 [Drosophila yakuba]
          Length = 1975

 Score = 68.9 bits (167), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 63/194 (32%), Positives = 98/194 (50%), Gaps = 20/194 (10%)

Query: 55   LENLPVNYVLLTV-TTNKPRDLRVKYWLSNDYGERFSISR-QGDISLMQCLDYETEDSYR 112
            +E  PV  VL T+  T++   +       NDY   F+I++  G I  +  LDYE     +
Sbjct: 1014 VEEQPVGTVLTTLQATDEDSSIGEFNITDNDY---FAINQTSGMIYTIARLDYEAVKEVK 1070

Query: 113  FTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTP-GSVIGKV 168
            F V  +DT    +T +A V + ++N+ND DP+F    Y     +  + + +P G+V GKV
Sbjct: 1071 FQVTVSDTGVPALTATADVVVDIINLNDNDPKFSQADY-----YFNVTENSPRGTVAGKV 1125

Query: 169  EAADGDKG--DRVTLSLRGPYEKMFSIND-SGHISIVDLSALNTSTIQ---LVVVATDTG 222
            EA DGD G    +T +L G   K FSI+  +G++ + + + L+   I+   L VVA D  
Sbjct: 1126 EAQDGDVGVFGEITYTLIGENNKYFSIDAYTGNVMVANSTILDREQIKELTLSVVAQDKA 1185

Query: 223  NPPRQASVPAIMHF 236
                Q S  A +H 
Sbjct: 1186 PAAVQKSATATIHI 1199



 Score = 47.4 bits (111), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 43/134 (32%), Positives = 64/134 (47%), Gaps = 23/134 (17%)

Query: 102 CLDYETEDSYRFTVYATDTLMTTSATV---NISVVNVNDWDPRFRYPQYELFLPHIPLAD 158
           CLDYE+E +Y  +  ATD     SA+V    ISV + ND  P    P Y         A 
Sbjct: 626 CLDYESETTYFLSYKATDDNGRGSASVVSLRISVTDANDSPPVCESPLYR--------AS 677

Query: 159 LTPGSVIGK----VEAADGDKGDRVTLSLRGP--YEKMFSIN-DSGHISI-----VDLSA 206
           +  G+V+      V+A D D   R++  +RG    E +F I+ ++G I I     +D++ 
Sbjct: 678 VDEGAVVFDSPLIVKARDADTMSRISYRIRGSEQVESIFDIDRETGQIIIRPNATLDVTN 737

Query: 207 LNTSTIQLVVVATD 220
           LN+  +   V A D
Sbjct: 738 LNSDQLIFAVEAND 751



 Score = 46.2 bits (108), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 66/233 (28%), Positives = 107/233 (45%), Gaps = 42/233 (18%)

Query: 11  ITLVVRAIQYDN----QDRYALATLIVSKAGTSLRELQ-----FSKNEYSVSALEN-LPV 60
           I+LV+RA +  N     D    AT   +KA  ++R++      F+  EYSVS LEN LP 
Sbjct: 318 ISLVIRARELVNGVPSDDPLTSAT---AKATVTIRDVNDSPPVFNHKEYSVSLLENTLPG 374

Query: 61  NYVLLTVT-TNKPRDLRVKYWLS-NDYGERFSIS-------RQGDISLMQ-CLDYETEDS 110
             + L ++ ++    +  K+ L  +D    F +         Q +I +    LDYE  + 
Sbjct: 375 TPLALDMSVSDADVGINSKFALRLDDVSGVFDVEPKLVTGYSQVNIRVANGTLDYENPNQ 434

Query: 111 YRFTVYA----TDT--LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSV 164
            +F V      TDT   ++++AT+ ++V++ ND  P F    Y   +    L    PG  
Sbjct: 435 RKFIVLVVAEETDTNPRLSSTATITVTVLDANDNKPVFEQESYSATVSEAAL----PGQY 490

Query: 165 IGKVEAAD------GDKGDRVTLSLRGPYEKMFSIND-SGHISIVDLSALNTS 210
           I  + A D      GD G R +LS  G   ++F +N+ +G IS+ +      S
Sbjct: 491 IATITARDVDSGSYGDSGIRYSLS--GTGAELFHVNEQTGVISLANCHGKGES 541



 Score = 42.0 bits (97), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 59/242 (24%), Positives = 90/242 (37%), Gaps = 44/242 (18%)

Query: 28   LATLIVSKAGTSLRELQFSKNEYSVSALEN----LPVNYVLLTVTTNKPRDLRVKYWLSN 83
            L ++ +  A  +  E   + N Y VS  EN    + + ++     +   RD+     L N
Sbjct: 1416 LLSVSIVDANENRPEFPDASNPYKVSINENSGRDVKIGHIQAASRSKHNRDIFYYMLLGN 1475

Query: 84   DYGERFSISRQGDISLMQCLDYETEDSYRFTVYAT-----------------DTLM--TT 124
            + G  +     GDI   + LD E  D Y   + A+                  TL    T
Sbjct: 1476 EDGAFYVDKLTGDIYTNKSLDREETDVYTLYILASIKADLHISEEERASFSIKTLNRDNT 1535

Query: 125  SATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR 184
             A V I+V++VND  P F  P Y   +     A+   G+ I  V A D D+G    +   
Sbjct: 1536 VAKVAITVLDVNDNPPVFEKPTYYAGVN----ANAKMGAAITLVNATDADQGKNAKIEFM 1591

Query: 185  GPYEKM----------------FSINDSGHISIVDLSA-LNTSTIQLVVVATDTGNPPRQ 227
                 +                F+I+  G IS   + A  N    +L +VA +   P R 
Sbjct: 1592 IVASNLYKFGATKSTGSIVPSPFAISQDGRISANTIMAEYNQDRFELEIVARELEQPQRS 1651

Query: 228  AS 229
            AS
Sbjct: 1652 AS 1653



 Score = 41.6 bits (96), Expect = 0.57,   Method: Compositional matrix adjust.
 Identities = 35/122 (28%), Positives = 52/122 (42%), Gaps = 12/122 (9%)

Query: 109 DSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKV 168
           D   F V A D L T    VNI+V +VN+  P F    Y   +      +   G+ + +V
Sbjct: 741 DQLIFAVEANDGLFTAHCGVNITVRDVNNHVPNFEQQSYSAVVEE----NSEIGTSVERV 796

Query: 169 EAADGDKGDRVTLSLR---GPYEKMFSINDSGHISI---VDLSALNTSTIQLVVVATDTG 222
            A D D G    L  R   G ++    +  +G + +   +D    N  T QL + A+D G
Sbjct: 797 HATDLDTGKNAELRYRIQQGSFDDFGIVESTGEVFVSRKLDFDRRN--TYQLQIQASDLG 854

Query: 223 NP 224
            P
Sbjct: 855 TP 856



 Score = 38.9 bits (89), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 37/149 (24%), Positives = 68/149 (45%), Gaps = 13/149 (8%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGERFSI-SRQGDISLM 100
           F +  YS    EN  +   +  V     +  ++  ++Y +     + F I    G++ + 
Sbjct: 774 FEQQSYSAVVEENSEIGTSVERVHATDLDTGKNAELRYRIQQGSFDDFGIVESTGEVFVS 833

Query: 101 QCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL- 156
           + LD++  ++Y+  + A+D     +T +AT+ I+V N ND DP F  P  +    H  + 
Sbjct: 834 RKLDFDRRNTYQLQIQASDLGTPSLTGTATLTINVQNSNDKDPYF-VPATQ----HAEVR 888

Query: 157 ADLTPGSVIGKVEAADGDKGDRVTLSLRG 185
           AD  PG ++  + A D D  +   L   G
Sbjct: 889 ADAPPGQLVYTLIALDPDVANHNALEFAG 917


>gi|194901912|ref|XP_001980495.1| GG17179 [Drosophila erecta]
 gi|190652198|gb|EDV49453.1| GG17179 [Drosophila erecta]
          Length = 1879

 Score = 68.9 bits (167), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 63/204 (30%), Positives = 101/204 (49%), Gaps = 20/204 (9%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLS-NDYGERFSISR-QGDISLMQC 102
              + +  +  +E  PV  VL T+          ++ +S NDY   F+I++  G I  +  
Sbjct: 1004 LEQQQIKLQMVEEQPVGTVLNTLQATDEDSSIGEFNISDNDY---FAINQTSGMIYTIAR 1060

Query: 103  LDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADL 159
            LDYE     +F V  +DT    +T +A V + ++N+ND DP+F    Y     +  + + 
Sbjct: 1061 LDYEAVKEVKFQVTVSDTGVPALTATADVVVDIINLNDNDPKFSQSDY-----YFNVTEN 1115

Query: 160  TP-GSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIND-SGHISIVDLSALNTSTIQ-- 213
            +P G+V GKVEA DGD G    +T +L G   K FSI+  +G++ + + + L+   I+  
Sbjct: 1116 SPRGTVAGKVEAQDGDVGVFGEITYTLIGENNKYFSIDAYTGNVMVANSTILDREQIKEL 1175

Query: 214  -LVVVATDTGNPPRQASVPAIMHF 236
             L VVA D      Q S  A +H 
Sbjct: 1176 TLSVVAQDKAPAAVQKSATATIHI 1199



 Score = 47.4 bits (111), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 67/233 (28%), Positives = 106/233 (45%), Gaps = 42/233 (18%)

Query: 11  ITLVVRAIQYDN----QDRYALATLIVSKAGTSLRELQ-----FSKNEYSVSALEN-LPV 60
           I+LV+RA +  N    +D    AT   +KA  ++R++      F+  EYSVS LEN LP 
Sbjct: 318 ISLVIRARELVNGVPSEDPLTSAT---AKATVTIRDVNDSPPVFNHKEYSVSLLENTLPG 374

Query: 61  NYVLLTVTTNKPR-DLRVKYWLS-NDYGERFSIS-------RQGDISLMQ-CLDYETEDS 110
             + L ++       +  K+ L  +D    F +         Q +I +    LDYE  + 
Sbjct: 375 TPLALDMSVGDADVGINSKFALRLDDVSGVFDVEPKLVTGYSQVNIRVANGTLDYENPNQ 434

Query: 111 YRFTVYA----TDT--LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSV 164
            +F V      TDT   ++++AT+ +SV++ ND  P F    Y   +    L    PG  
Sbjct: 435 RKFIVLVVAEETDTNPRLSSTATITVSVLDANDNKPVFEQESYSATVSESAL----PGQY 490

Query: 165 IGKVEAAD------GDKGDRVTLSLRGPYEKMFSIND-SGHISIVDLSALNTS 210
           I  + A D      GD G R +LS  G   ++F +N+ +G IS+ +      S
Sbjct: 491 IATITARDVDSGSYGDSGIRYSLS--GTGAELFHVNEQTGVISLANCHGKGES 541



 Score = 45.4 bits (106), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 42/134 (31%), Positives = 64/134 (47%), Gaps = 23/134 (17%)

Query: 102 CLDYETEDSYRFTVYATDTLMTTSATV---NISVVNVNDWDPRFRYPQYELFLPHIPLAD 158
           CLDYE+E +Y  +  ATD     SA+V    ISV + ND  P    P Y         A 
Sbjct: 626 CLDYESETTYFLSYKATDDNGRGSASVVSLRISVTDANDSPPICESPLYR--------AS 677

Query: 159 LTPGSVIGK----VEAADGDKGDRVTLSLRGP--YEKMFSIN-DSGHISI-----VDLSA 206
           +  G+V+      V+A D D   R++  +RG    E +F I+ ++G I I     +D++ 
Sbjct: 678 VDEGAVVFDSPLIVKARDADTMSRISYRIRGSEQVESIFDIDRETGQIIIRPNATLDVTN 737

Query: 207 LNTSTIQLVVVATD 220
           L++  +   V A D
Sbjct: 738 LHSDQLIFAVEAND 751



 Score = 42.7 bits (99), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 35/122 (28%), Positives = 52/122 (42%), Gaps = 12/122 (9%)

Query: 109 DSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKV 168
           D   F V A D L T    VNI+V +VN+  P F    Y   +      +   G+ + +V
Sbjct: 741 DQLIFAVEANDGLFTAHCGVNITVRDVNNHAPNFEQQSYSAVVEE----NSEIGTSVERV 796

Query: 169 EAADGDKGDRVTLSLR---GPYEKMFSINDSGHISI---VDLSALNTSTIQLVVVATDTG 222
            A D D G    L  R   G ++    +  +G + +   +D    N  T QL + A+D G
Sbjct: 797 HATDLDTGKNAELRYRIQQGSFDDFGIVESTGEVFVSRKLDFDRRN--TYQLQIQASDLG 854

Query: 223 NP 224
            P
Sbjct: 855 TP 856



 Score = 38.9 bits (89), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 63/260 (24%), Positives = 97/260 (37%), Gaps = 68/260 (26%)

Query: 34   SKAGTSLRELQFSKNEYSVSALENLPV---------NYVLLTVTTNK--PRDLRVKY--- 79
            +KA  ++  +   K E+ + AL N  +         +Y+LLTV+ N+   RD+++ +   
Sbjct: 1302 TKAIITVLRVNRHKPEFVIPALSNATIEIPGDIVQPDYLLLTVSINENSGRDVKIGHIQA 1361

Query: 80   --------------WLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYAT------- 118
                           L N+ G  +     GDI   + LD E  D Y   + A+       
Sbjct: 1362 ASRSKHNRDIFYYMLLGNEDGAFYVDKLTGDIYTNKSLDREETDVYTLYILASIKADLHI 1421

Query: 119  ----------DTLM--TTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIG 166
                       TL    T A V I+V++VND  P F  P Y   +     A+   G  I 
Sbjct: 1422 SEEERASFSIKTLNRDNTVAKVAITVLDVNDNPPVFEKPTYYAGVN----ANAKMGVSIR 1477

Query: 167  KVEAADGDKGDRVTLSLRGPYEKM----------------FSINDSGHISIVDLSA-LNT 209
             V A D D+G    +        +                F+I+  G IS   + A  N 
Sbjct: 1478 LVNATDADQGKNAKIEFMIVASNLYKFGATKSTGSIVPSPFAISQDGRISANTIMAEYNQ 1537

Query: 210  STIQLVVVATDTGNPPRQAS 229
               +L +VA +   P R AS
Sbjct: 1538 DRFELEIVARELEQPQRSAS 1557



 Score = 38.1 bits (87), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 37/149 (24%), Positives = 67/149 (44%), Gaps = 13/149 (8%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGERFSI-SRQGDISLM 100
           F +  YS    EN  +   +  V     +  ++  ++Y +     + F I    G++ + 
Sbjct: 774 FEQQSYSAVVEENSEIGTSVERVHATDLDTGKNAELRYRIQQGSFDDFGIVESTGEVFVS 833

Query: 101 QCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL- 156
           + LD++  ++Y+  + A+D     +T +AT+ I+V N ND DP F  P  +    H  + 
Sbjct: 834 RKLDFDRRNTYQLQIQASDLGTPSLTGTATLTINVQNSNDKDPYF-VPATQ----HAEVR 888

Query: 157 ADLTPGSVIGKVEAADGDKGDRVTLSLRG 185
           AD  PG ++  + A D D      L   G
Sbjct: 889 ADAPPGQLVYTLIALDPDVASHNALEFAG 917


>gi|242024858|ref|XP_002432843.1| Cadherin-23 precursor, putative [Pediculus humanus corporis]
 gi|212518352|gb|EEB20105.1| Cadherin-23 precursor, putative [Pediculus humanus corporis]
          Length = 2799

 Score = 68.9 bits (167), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 78/263 (29%), Positives = 117/263 (44%), Gaps = 42/263 (15%)

Query: 5   DDFLQPITLVVRAIQYDNQDRYALATLIVSKAG--------TSLRELQ--------FSKN 48
           D  L  +TL  R + Y+   R++L  ++ + +G        T + E+Q        F ++
Sbjct: 366 DSILGHLTLTKR-LDYEMNQRHSLV-IVATDSGIPTLSSNMTLIIEVQDVNDNAPIFERS 423

Query: 49  EYSVSALENLPVNYVLLTV------TTNKPR-DLRVKYWLSNDY-----GERFSI-SRQG 95
           EY V+ +E+LP+N  +L V      T N  R   R+K  + N        E F I    G
Sbjct: 424 EYYVNVIESLPINSQILQVAATDQDTGNNARITYRIKKIIGNGTTGNVDDETFGIFPNSG 483

Query: 96  DISLMQCLDYETEDSYRFTVYATDTL---MTTSATVNISVVNVNDWDPRFRYPQYELFLP 152
            I L + LD ET + Y   + ATD     +T +  + I+V + ND DP+F+   YE  + 
Sbjct: 484 LIYLKENLDRETINKYDVLITATDNGTPPLTATCKILITVTDANDNDPKFQMDNYEFSIE 543

Query: 153 HIPLADLTPGSVIGKVEAADGDKGDR--VTLSLRGPYEKMFSIN-DSGHISIVD-LSALN 208
                +L P S +GK+ A D D G    +  S        F IN  +G I   + L    
Sbjct: 544 E----NLPPNSPVGKISAVDLDYGQNSLIKYSFIPSNNSSFKINPTTGDIYAKESLDREK 599

Query: 209 TSTIQLVVVATDTGNPPRQASVP 231
               +LV  A D G PPR + VP
Sbjct: 600 KEIYELVAEARDQGVPPRSSRVP 622



 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 60/184 (32%), Positives = 87/184 (47%), Gaps = 17/184 (9%)

Query: 52   VSALENLPVNYVLLTVTTNK-PRDLRVKYWLSNDYGERFSISR-QGDISLMQCLDYETED 109
            +S  E   V  VL +VT N    +  + Y+L+ +  E FSI R  G I L + LDYE + 
Sbjct: 1671 ISVSEGTEVGTVLTSVTANDVDTNPTLTYFLTKETNE-FSIDRFSGKIILGKKLDYENKK 1729

Query: 110  SYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVE 169
             Y   + A+DT  T   ++ I V +VND  P F  P Y++ L   P   +TP   +  V 
Sbjct: 1730 EYNLAIMASDTAHTAQTSLMIRVTDVNDNAPSFSKPYYQVVLTDGP-DHVTP---LLTVN 1785

Query: 170  AADGDKGD--RVTLSLRGPYEKMFSINDSGHISIVDLSAL-------NTSTIQLVVVATD 220
            A D D G+  ++  SL  P  K  +I+ S  I   + ++L           I L +VA D
Sbjct: 1786 ATDLDSGNNAKIKYSLYKPV-KGITIDGSKGILKANKTSLTEMIMTEGVKDIDLALVAED 1844

Query: 221  TGNP 224
             G P
Sbjct: 1845 YGMP 1848



 Score = 55.1 bits (131), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 61/219 (27%), Positives = 100/219 (45%), Gaps = 19/219 (8%)

Query: 13   LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKP 72
            L V A+ +    ++ +A++ +   G +    +F  + Y+VS  E+LP   +   +T   P
Sbjct: 1011 LNVTAMDHGLPQKFKMASVNIVTQGNNEIPPKFINSNYTVSVAEDLPSGSIKKNMTYQIP 1070

Query: 73   RDLRVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDTLMTTSATV---N 129
              +    ++ N        S+ G +++   LD E+   Y F +Y TD        V    
Sbjct: 1071 VGVAEDKFIIN--------SKTGLVTIKSTLDRESRSVYTFPIYVTDETGKRQYDVTLLT 1122

Query: 130  ISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSL-RGP 186
            ++V++VND  P F+  Q   +  H+P  + T  S I KV A+D D+G    +T S+  G 
Sbjct: 1123 VNVLDVNDHAPEFK--QGSCYPIHVP--ENTDLSAIHKVVASDLDEGVNGEITYSITSGN 1178

Query: 187  YEKMFSIN-DSGHISIVDLSALNTSTIQLVVVATDTGNP 224
                FSI+  SG +S   L     S   L + A D GNP
Sbjct: 1179 IGNKFSIDIHSGLLSARPLDREVHSKYVLGITAQDRGNP 1217



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 62/207 (29%), Positives = 95/207 (45%), Gaps = 30/207 (14%)

Query: 45   FSKNEYSVSALENLPV-----NYVLLTVTTNKPRDLRVKYWLSNDYGER----FSISR-Q 94
            + +N  ++   E+ PV     NY      T+   DLR  Y L   Y E     F++    
Sbjct: 822  WPENPITIELPEDTPVSTVISNYSAFDADTSSNSDLR--YSLLRCYPESGTKVFAVDMLT 879

Query: 95   GDISLMQCLDYETEDSYRFTVYATDTLM------TTSATVNISVVNVNDWDPRFRYPQYE 148
            G I+L   LDYE    Y   V ATD  +      TTSAT  I + + ND +P F  P  +
Sbjct: 880  GIITLNSPLDYEQLTEYTLIVSATDQAVNVTERRTTSATFIIKITDSNDNEPYFISPTTK 939

Query: 149  LFLPHIPLADLTPGSVIGKVEAA--DGDKGDRVTLSL-RGPYEKMFSIN-DSGHIS---- 200
              L +  +    PGSV+ K+ A   D D+  RV+ ++  G  +  FS++ D+G +     
Sbjct: 940  SILVNDAIE---PGSVLAKIIAVDLDSDENGRVSYTITSGNDDGKFSLDHDTGILKLSKS 996

Query: 201  -IVDLSALNTSTIQLVVVATDTGNPPR 226
             ++D + L  ++  L V A D G P +
Sbjct: 997  FVIDNNTLKKNSFVLNVTAMDHGLPQK 1023



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 58/218 (26%), Positives = 98/218 (44%), Gaps = 22/218 (10%)

Query: 27  ALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNY---VLLTVTTNKPRDLRVKYWLSN 83
           A   ++++    +  + +F  + Y  S  ENLP N     +  V  +  ++  +KY    
Sbjct: 515 ATCKILITVTDANDNDPKFQMDNYEFSIEENLPPNSPVGKISAVDLDYGQNSLIKYSFIP 574

Query: 84  DYGERFSIS-RQGDISLMQCLDYETEDSYRFTVYATDTLM---TTSATVNISVVNVNDWD 139
                F I+   GDI   + LD E ++ Y     A D  +   ++   V I V +VND  
Sbjct: 575 SNNSSFKINPTTGDIYAKESLDREKKEIYELVAEARDQGVPPRSSRVPVRIIVTDVNDNA 634

Query: 140 PRFRYPQYELFLPHIPLADLTPGSV-IGKVEAADGDKGDRVTLS---LRG----PYEKMF 191
           P    P+ ++    + + +  PG   + K++A D DKG   T++   L+G     Y+ +F
Sbjct: 635 PELLDPREDV----VSVREEQPGGTEVTKIKAIDKDKGKNSTITYSILKGRDSDGYD-LF 689

Query: 192 SIND-SGHISI-VDLSALNTSTIQLVVVATDTGNPPRQ 227
           +I+  +G I     L     S  +L V ATD G PP+Q
Sbjct: 690 TIDPITGSIRTRTTLDHEERSIYRLAVAATDGGKPPKQ 727



 Score = 47.0 bits (110), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 56/198 (28%), Positives = 91/198 (45%), Gaps = 17/198 (8%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTV---TTNKPRDLRVKYWLSNDYGERFSI-SRQGDISL 99
            QFS+ +Y+ S  E++  N  +LTV     +   + ++ Y L+N+    F I ++ G IS 
Sbjct: 1239 QFSQQKYTASIPEDILPNSDVLTVHAVDADTGINSKIFYSLANETHWLFKIDNKTGVIST 1298

Query: 100  MQCLDYETEDSYRFTVYATD----TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIP 155
                D E  + Y F V A+D            V I++ +VND  P F    + +  P   
Sbjct: 1299 SGFFDREKINVYEFQVVASDGGRYDARWKKVPVRITITDVNDNKPVFTSNPFFVQAPIYT 1358

Query: 156  LADLTPGSVIGKVEAADGDKG---DRVTLSLRGPYEKMFSIN-DSGHISIVDLSALNTST 211
             A    GS + KV A D D+G   + V   L  P    F IN ++G ++     + ++  
Sbjct: 1359 QA----GSSLIKVTATDDDEGTNSEIVYSFLNEPPNNKFKINPNTGLVTASSSLSSDSGK 1414

Query: 212  I-QLVVVATDTGNPPRQA 228
            +  L ++A D GNPP+  
Sbjct: 1415 LFHLEILARDRGNPPKSG 1432



 Score = 46.6 bits (109), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 46/88 (52%), Gaps = 4/88 (4%)

Query: 92   SRQGDISLMQCLDYETEDSYRFTVYATDT-LMTTSATVNISVVNVNDWDPRFRYPQYELF 150
            S  G +S     DYE ++ Y F ++A D    T    V+I + + +++ P+F    Y   
Sbjct: 2154 SNTGVVSTNSVFDYENKNRYAFILHAVDVDGKTAKVRVHIEIESRDEFHPQFTDRTYRFT 2213

Query: 151  LPHIPLAD--LTPGSVIGKVEAADGDKG 176
            +P  P +D  L  G++IG VEA D DKG
Sbjct: 2214 IPP-PYSDGLLPVGTIIGNVEATDRDKG 2240



 Score = 45.4 bits (106), Expect = 0.051,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 43/80 (53%), Gaps = 4/80 (5%)

Query: 76  RVKYWLSNDYG---ERFSISRQGDISLMQCLDYETEDSYRFTVYATDT-LMTTSATVNIS 131
           +V Y L  + G   E F  S  G+I +   LDYE   SY F V A+D   ++T+A V ++
Sbjct: 21  KVNYTLGEESGKLKEFFIKSDTGEICIANELDYEKIKSYEFPVIASDRGGLSTTAIVKVT 80

Query: 132 VVNVNDWDPRFRYPQYELFL 151
           V +VND  P F   +Y + L
Sbjct: 81  VTDVNDHRPIFYPKEYNVSL 100



 Score = 40.8 bits (94), Expect = 0.99,   Method: Compositional matrix adjust.
 Identities = 56/197 (28%), Positives = 88/197 (44%), Gaps = 19/197 (9%)

Query: 43   LQFSKNEYSVSALENLPVNYVLLTVTTNKP--RDLRVKY-WLSNDYGERFSI-SRQGDIS 98
            L+F  + Y V+ LEN   +  +L V+  +   R  R+KY  L+  +   F+I S+ G I 
Sbjct: 1451 LRFQNSTYDVTLLENTSGSKEILQVSAVRTDGRRHRIKYSLLTGRHENLFTIDSKTGWIK 1510

Query: 99   LMQC----LDYETEDSYRFTVYA-TDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
            + Q     LDYE   S + TV A TD  +     V I + + ND  P+F    Y   +  
Sbjct: 1511 IEQSSVNYLDYENFKSIKLTVMAETDGPLFGYCDVIIKLQDENDNAPKFTQEYYTASV-- 1568

Query: 154  IPLADLTPGSVIGKVEAADGDKGDRVTL---SLRGPYEKMFSIND--SGHISI-VDLSAL 207
                    G+ + +V A D D+G    +    + G ++  F I    SG +   + L   
Sbjct: 1569 --WEGNNKGTYVMQVSATDLDEGSNAHVLYHIVDGNHDNAFVIEPPFSGLVKTNIVLDRE 1626

Query: 208  NTSTIQLVVVATDTGNP 224
                 +L ++ATD GNP
Sbjct: 1627 IRDVYKLTIIATDEGNP 1643



 Score = 40.4 bits (93), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 41/163 (25%), Positives = 74/163 (45%), Gaps = 24/163 (14%)

Query: 95  GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFL 151
           G ++L + LDYE    +   + ATD+    ++++ T+ I V +VND  P F   +Y + +
Sbjct: 370 GHLTLTKRLDYEMNQRHSLVIVATDSGIPTLSSNMTLIIEVQDVNDNAPIFERSEYYVNV 429

Query: 152 PHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSGHIS----------- 200
               +  L   S I +V A D D G+   ++ R   +K+     +G++            
Sbjct: 430 ----IESLPINSQILQVAATDQDTGNNARITYR--IKKIIGNGTTGNVDDETFGIFPNSG 483

Query: 201 -IVDLSALNTSTIQ---LVVVATDTGNPPRQASVPAIMHFPEA 239
            I     L+  TI    +++ ATD G PP  A+   ++   +A
Sbjct: 484 LIYLKENLDRETINKYDVLITATDNGTPPLTATCKILITVTDA 526


>gi|332029981|gb|EGI69806.1| Protocadherin-like wing polarity protein stan [Acromyrmex echinatior]
          Length = 3164

 Score = 68.9 bits (167), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 71/243 (29%), Positives = 113/243 (46%), Gaps = 23/243 (9%)

Query: 6    DFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLL 65
            D+ Q    V+     D   R   A + V+ +  +    +F    YSVS  E+ P+   +L
Sbjct: 765  DYKQEKRFVLTVTASDTGSRTDTALVYVNVSDANNYSPEFENAPYSVSVFEDAPIGVTVL 824

Query: 66   TVTTNKP---RDLRVKYWLSNDYGER----FSISRQ-GDISLMQCLDYETEDSYRFTVYA 117
             V+       ++ ++ Y L+ D GE+    F+I+ Q G I+  + LD E+  SY  TV A
Sbjct: 825  VVSATDADVGKNAQITYSLATDNGEQVITEFTINSQTGAITTTKALDRESVPSYLLTVTA 884

Query: 118  TDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEA--AD 172
             D     ++ +  V ISV +VND  P F  PQY   +    L D+   + + +V A  AD
Sbjct: 885  RDGGVPSLSDTTDVEISVTDVNDNAPVFEAPQYHGSI----LEDVLLSTSVLRVAATDAD 940

Query: 173  GDKGDRVTLSLRGPYEKMFSINDSGHI----SIVDLSALNTSTIQLVVVATDTGNPPRQA 228
             D   RV   L    +  F+I+ +  I     I+D  ++   T++   VATD G+P   +
Sbjct: 941  TDLNGRVRYGLEDDGDGAFTIDSTTGIIRTAKILDRESVAYYTLK--AVATDRGSPALSS 998

Query: 229  SVP 231
             VP
Sbjct: 999  IVP 1001



 Score = 54.3 bits (129), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 67/230 (29%), Positives = 103/230 (44%), Gaps = 23/230 (10%)

Query: 13  LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTT--- 69
           +V+RA    +  R     L+V     +    +F  + +  S  E++PV Y +L V     
Sbjct: 558 IVIRAQDGGSPARSNTTQLLVMVRDVNDNAPRFYTSHFQESVSESVPVGYSILRVQAYDA 617

Query: 70  NKPRDLRVKYWL-SNDYG----ERFSI---SRQGDISLMQCLDYETEDSYRFTVYATDTL 121
           ++  +  +KY + + D+     E F I   +  G I   + LD E    Y+FTV A D+ 
Sbjct: 618 DEGNNALIKYTIGARDFTGASTENFPITVKAETGWIYTTKQLDREQCSKYQFTVIAADSG 677

Query: 122 ---MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDR 178
               + SATV ++V +VND DP F    YE  +    LA    G+ +  V A D D+  R
Sbjct: 678 EEPKSASATVFLTVTDVNDNDPYFEPKTYEAVVSEDSLA----GTPVTTVTATDPDEDSR 733

Query: 179 VTLSLRGPYEK-MFSI---NDSGHISIVD-LSALNTSTIQLVVVATDTGN 223
           +   + G   +  FSI   N  G I+I   L         L V A+DTG+
Sbjct: 734 IHYEITGGNTRGRFSISSQNGRGLITIAQTLDYKQEKRFVLTVTASDTGS 783



 Score = 54.3 bits (129), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 63/232 (27%), Positives = 106/232 (45%), Gaps = 27/232 (11%)

Query: 25  RYALATLIVSKAGTSLRELQFSKNEYSVSALENL-----PVNYVLLTVTTNKPRDLRVKY 79
           R + ATL+V     +    QF++  YS +  E+L     PV   +  +  +   +  V+Y
Sbjct: 463 RSSNATLVVRVLDDNDNYPQFTERTYSATVPEDLDYTTNPVIARIRAMDADAGANAAVRY 522

Query: 80  WL-SNDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVN 134
            +   +    FSI S  GD++L++ LDYE+  SY+  + A D      + +  + + V +
Sbjct: 523 AIIGGNTQNTFSIDSMNGDVTLVKPLDYESTRSYKIVIRAQDGGSPARSNTTQLLVMVRD 582

Query: 135 VNDWDPRFRYPQY-ELFLPHIPLADLTPGSVIGKVEAADGDKGD----RVTLSLR---GP 186
           VND  PRF    + E     +P+     G  I +V+A D D+G+    + T+  R   G 
Sbjct: 583 VNDNAPRFYTSHFQESVSESVPV-----GYSILRVQAYDADEGNNALIKYTIGARDFTGA 637

Query: 187 YEKMFSIN---DSGHI-SIVDLSALNTSTIQLVVVATDTGNPPRQASVPAIM 234
             + F I    ++G I +   L     S  Q  V+A D+G  P+ AS    +
Sbjct: 638 STENFPITVKAETGWIYTTKQLDREQCSKYQFTVIAADSGEEPKSASATVFL 689



 Score = 44.7 bits (104), Expect = 0.079,   Method: Compositional matrix adjust.
 Identities = 53/207 (25%), Positives = 91/207 (43%), Gaps = 27/207 (13%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSN----------DYGERFSI 91
           F   EY  S  E +PV   ++TV     +  R+  V+Y + +          +    F I
Sbjct: 366 FEGPEYDASVREGVPVGSTVITVKATDQDTGRNAEVEYSIVSIMAGSSITHMEDTATFRI 425

Query: 92  S-RQGDISLMQCLDYETEDSYRFTVYATD------TLMTTSATVNISVVNVNDWDPRFRY 144
             R G ++    LD E  + Y   +  TD         +++AT+ + V++ ND  P+F  
Sbjct: 426 DPRSGVVTTRTPLDREQTEIYTVVLSVTDQATPPSARRSSNATLVVRVLDDNDNYPQFTE 485

Query: 145 PQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIND-SGHIS 200
             Y   +P     D T   VI ++ A D D G    +    + G  +  FSI+  +G ++
Sbjct: 486 RTYSATVPED--LDYTTNPVIARIRAMDADAGANAAVRYAIIGGNTQNTFSIDSMNGDVT 543

Query: 201 IVD-LSALNTSTIQLVVVATDTGNPPR 226
           +V  L   +T + ++V+ A D G+P R
Sbjct: 544 LVKPLDYESTRSYKIVIRAQDGGSPAR 570


>gi|297461475|ref|XP_001249786.2| PREDICTED: protocadherin Fat 4 [Bos taurus]
 gi|297484612|ref|XP_002694439.1| PREDICTED: protocadherin Fat 4 [Bos taurus]
 gi|296478713|tpg|DAA20828.1| TPA: fat-like [Bos taurus]
          Length = 4981

 Score = 68.9 bits (167), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 74/270 (27%), Positives = 122/270 (45%), Gaps = 44/270 (16%)

Query: 2    INEDD-----FLQPITLV---VRAIQYDNQDRYALATLIVSKAGTSLRELQ--------- 44
            +NEDD     FL P+T V    R + Y+ Q  Y L T+     G     ++         
Sbjct: 1880 VNEDDEDGIFFLNPVTGVFNLTRMLDYETQQYYIL-TVRAEDGGGQFTTIRVYFNILDVN 1938

Query: 45   -----FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWL-SNDYGERFSISRQG 95
                 FS N YS S +ENLP+   +L        D    ++ Y + S D   +F++ + G
Sbjct: 1939 DNPPIFSLNSYSTSLMENLPLGSTVLVFNVTDADDGINSQLAYSIASGDSLGQFTVDKNG 1998

Query: 96   DISLMQCLDYETEDSYRFTVYATD------TLMTTSATVNISVVNVNDWDPRFRYPQYEL 149
             + +++ LD E++  Y   V   D      +  T++A ++I +++VND  P F  P+   
Sbjct: 1999 VLKVLKPLDRESQSFYNLVVQVHDLPQLPASRFTSTAQISIILLDVNDNPPTFLSPK--- 2055

Query: 150  FLPHIPLADLTP-GSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIND-SGHISIV-DL 204
             L +IP  + TP  +++ K +A D D G    +  +L  P    F+I    G + +  +L
Sbjct: 2056 -LTYIP--ENTPIDTIVFKAQATDPDSGPNSYIEYTLLNPSGNKFTIGTIDGEVRLTGEL 2112

Query: 205  SALNTSTIQLVVVATDTGNPPRQASVPAIM 234
                 S   L VVATD G+P   +S   ++
Sbjct: 2113 DREEVSNYTLTVVATDKGHPSLSSSTEVVV 2142



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 63/192 (32%), Positives = 92/192 (47%), Gaps = 24/192 (12%)

Query: 50   YSVSALENLPVNYVLLTVTTNKPRDLRV----KYWLSNDYGERFSIS-RQGDISLMQCLD 104
            +S    EN P+ Y +  VTT+   D+ V    +Y +  D    F+I+   GDI + + L+
Sbjct: 2777 FSAHVPENSPLGYTVTRVTTSD-EDIGVNAISRYSIM-DTSLPFTINPSTGDIVISRPLN 2834

Query: 105  YETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSV 164
             E  D YR  V A D+  T S  V I V +VND  PRF  P Y L  P   L ++  GS 
Sbjct: 2835 REDTDRYRIRVSAHDSGWTVSTDVTIFVTDVNDNAPRFSRPSYYLDCPE--LTEI--GSK 2890

Query: 165  IGKVEAADGDKGD--RVTLSLRGPYEKMFSINDS-GHI---------SIVDLSALNTSTI 212
            + +V A D D+G   +V   ++   E  F IN S G I         ++   S +N +  
Sbjct: 2891 VTQVSATDPDEGSNGQVFYFIKSQSE-YFRINASTGEIFNKQVLKYQNVSGFSNVNINRH 2949

Query: 213  QLVVVATDTGNP 224
              +V ++D GNP
Sbjct: 2950 SFIVTSSDRGNP 2961



 Score = 58.9 bits (141), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 55/183 (30%), Positives = 89/183 (48%), Gaps = 16/183 (8%)

Query: 56   ENLPVNYVLLTVTTNKPR---DLRVKYWLSNDYGERFSISR-QGDISLMQCLDYETEDSY 111
            EN P++ ++       P    +  ++Y L N  G +F+I    G++ L   LD E   +Y
Sbjct: 2061 ENTPIDTIVFKAQATDPDSGPNSYIEYTLLNPSGNKFTIGTIDGEVRLTGELDREEVSNY 2120

Query: 112  RFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKV 168
              TV ATD     +++S  V + V+++ND +P F    Y++ +    L     G+ I +V
Sbjct: 2121 TLTVVATDKGHPSLSSSTEVVVMVLDINDNNPVFAQAMYKVEINENTLT----GTDITQV 2176

Query: 169  EAADGDKGDRVTLS---LRGPYEKMFSIND-SGHISIVD-LSALNTSTIQLVVVATDTGN 223
             AADGD+G    +    + G   + F I+  +G I++   L    T T  L V ATD G+
Sbjct: 2177 FAADGDEGTNGQVRYGIVDGNANQEFRIDSVTGAITVAKPLDREKTPTYSLTVQATDRGS 2236

Query: 224  PPR 226
             PR
Sbjct: 2237 TPR 2239



 Score = 57.8 bits (138), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 47/157 (29%), Positives = 82/157 (52%), Gaps = 13/157 (8%)

Query: 88   RFSI-SRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFR 143
            +F+I S  G ++L+  LDYE   +Y   + A D+    + ++ T+NI +++ ND  P F 
Sbjct: 1257 QFAIDSTSGQVTLIGRLDYEATPAYSLVIQAVDSGAVSLNSTCTLNIDILDENDNTPSF- 1315

Query: 144  YPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTL--SLRGPY-EKMFSIN-DSGHI 199
             P+  LF+    L ++  G ++  V A D D GD   L  S+ G      FSI+ ++G I
Sbjct: 1316 -PKSTLFVD--VLENMRIGELVSSVTATDSDSGDNADLHYSITGTNNHGTFSISPNTGSI 1372

Query: 200  SIVDLSALNTSTI-QLVVVATDTGNPPRQASVPAIMH 235
             +       T ++ +L + A D G PPR +++  ++H
Sbjct: 1373 FLAKKLDFETQSLYKLNITAKDQGRPPRSSTMSVVIH 1409



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 58/198 (29%), Positives = 89/198 (44%), Gaps = 24/198 (12%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLS-NDYGERFSISRQGDISLM 100
            F +  Y V+  E+ PVN     V     +   +  + Y ++  + G+ F I   G + + 
Sbjct: 996  FDQLSYEVTLSESEPVNSRFFKVQAFDKDSGANGEIAYSIAEGNTGDAFGIFPDGQLYIK 1055

Query: 101  QCLDYETEDSYRFTVYATDTLMTT-SATVNISVV--NVNDWDPRFRYPQYELFLPHIPLA 157
              LD E +D Y   V A+D  +   SATVN++V+  +VND  P F    Y  +       
Sbjct: 1056 SELDRELQDRYVLLVVASDRAVEPLSATVNVTVILEDVNDNRPLFNSTNYTFYFEE---- 1111

Query: 158  DLTPGSVIGKVEAADGDKGD----RVTLSLRGPYEKMFSINDSGHIS---IVDLSAL--- 207
            +  PGS +GKV A D D G     R +  +  P  ++ +I  SG I+     D  +L   
Sbjct: 1112 EQRPGSFVGKVSAIDKDFGPNGEVRYSFEMVQPDFELHTI--SGEITNTHQFDRESLMRR 1169

Query: 208  -NTSTIQLVVVATDTGNP 224
              T+     V+ATD G P
Sbjct: 1170 RGTAVFSFTVIATDQGLP 1187



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 34/101 (33%), Positives = 49/101 (48%), Gaps = 5/101 (4%)

Query: 77   VKYWLSNDYGERFSIS-RQGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNV 135
            V Y + +   + F I    GD+   + LD E    Y   V A D L ++   +NI+V +V
Sbjct: 1775 VTYTIISGADDSFRIDPESGDLIATKRLDRERRSKYSLLVRADDGLQSSDMRINITVSDV 1834

Query: 136  NDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG 176
            ND  P+F  P Y   +P     D TPGS++  + A D D G
Sbjct: 1835 NDHTPKFSRPVYSFDIPE----DTTPGSLVAAILATDDDSG 1871



 Score = 55.1 bits (131), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 59/190 (31%), Positives = 94/190 (49%), Gaps = 15/190 (7%)

Query: 56   ENLPVNYVLLTVTTNKPRDLRVKYWL-SNDYGERFSISR-QGDISLMQCLDYETEDSYRF 113
            EN PV  ++ TVT +  R   + Y++ S + G    I +  G +S+ Q LD+E    Y  
Sbjct: 2578 ENQPVGTLVTTVTGSSLRGEPLSYYIASGNLGNTLQIDQLTGQVSISQPLDFEKIQKYVV 2637

Query: 114  TVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEA 170
             + A D      ++   ++I+V++VND  P F+    + F+  I L +L+P  ++  V A
Sbjct: 2638 WIEARDGGFPPFSSYEKLDITVLDVNDNPPVFKE---DPFVSEI-LENLSPRKIL-TVSA 2692

Query: 171  ADGDKGDRVTLS---LRGPYEKMFSINDS-GHI-SIVDLSALNTSTIQLVVVATDTGNPP 225
             D D G    L    + G  E  FSIN + G I SI  L     S   L+V ++D G+P 
Sbjct: 2693 VDKDSGPNGQLDYEIINGNKEHSFSINHATGEIRSIRPLDREKISQYVLIVKSSDRGSPS 2752

Query: 226  RQASVPAIMH 235
            +  SV  I++
Sbjct: 2753 QSTSVKVIIN 2762



 Score = 54.7 bits (130), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 49/149 (32%), Positives = 73/149 (48%), Gaps = 12/149 (8%)

Query: 95   GDISLMQCLDYETEDSYRFTVYATDT----LMTTSATVNISVVNVNDWDPRFRYPQYELF 150
            G I     LD ET+++Y   V A+D      +++S +V ++V +VND  PRF   Q+  +
Sbjct: 2415 GQIITSALLDRETKENYTLVVVASDAGSPEPLSSSTSVLVTVTDVNDNPPRF---QHHPY 2471

Query: 151  LPHIPLADLTPGSVIGKVEAADGDKGDRVTL--SLRGPYEKMFSINDSGHISIVDLSALN 208
            + HIP +   PGS +  V   D D G    L  SL G   + F I D+   +I+   ALN
Sbjct: 2472 VTHIP-SPTPPGSFVFAVTVTDADIGPNSELHYSLSGRNSEKFHI-DTLRGAIMAAGALN 2529

Query: 209  -TSTIQLVVVATDTGNPPRQASVPAIMHF 236
             TS +   V   D G+ P+  S    + F
Sbjct: 2530 GTSEVTFSVYVKDGGSVPKTDSTTVTVRF 2558



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 49/187 (26%), Positives = 96/187 (51%), Gaps = 12/187 (6%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRDLR--VKYWLS-NDYGERFSISR-QGDISLM 100
           FS+  YS    EN+ + Y + +V+ +   DL   + Y ++  D    F+I++  G ++  
Sbjct: 793 FSQAAYSFVVFENVALGYHVGSVSAST-MDLNSNISYLITTGDQKGMFAINQVTGQLTTA 851

Query: 101 QCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLT 160
             +D E +  Y+  V A+   +T  + VNI+V ++ND  P F      + +    + +  
Sbjct: 852 SVIDREEQSFYQLKVVASGGTVTGDSMVNITVKDLNDNSPHFLQAVESVNV----VENWQ 907

Query: 161 PGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIND-SGHISIVDLSALNTSTIQLVVV 217
            G  I + +A D D+G    V  SL+   + +F+IN+ +G+IS++    ++  + Q+ ++
Sbjct: 908 AGHSIFQAKAVDPDEGVNGMVLYSLKQNPKNLFTINERNGNISLLGPLDVHAGSYQIEIL 967

Query: 218 ATDTGNP 224
           A+D G P
Sbjct: 968 ASDMGVP 974



 Score = 51.6 bits (122), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 61/224 (27%), Positives = 98/224 (43%), Gaps = 37/224 (16%)

Query: 45   FSKNEYSVSALENLPV--NYVLLTVTTNKPR--DLRVKYWL-SNDYGERFSISRQGDISL 99
            F  + YSV+  ENL      VL  V  +  +  + ++ Y L   +    F++S  G++ +
Sbjct: 2259 FELSPYSVNVPENLGTLPRTVLQVVARDDDQGSNSKLSYVLFGGNEDNAFTLSASGELRV 2318

Query: 100  MQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
             Q LD ET++ +   + ATD+    +T + T+N+ V ++ND  P F    Y   +P    
Sbjct: 2319 TQSLDRETKEHFVLLITATDSGFPALTGTGTINVIVDDINDNVPTFASKMYFTTIPE--- 2375

Query: 157  ADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSGHISIVDLSALNTSTIQ--- 213
             D   G+ +  V A+D D      + + G     F+IN S    I+  + L+  T +   
Sbjct: 2376 -DAPTGTDVILVNASDIDASTNAVIRIIGG-NSQFTINPSTG-QIITSALLDRETKENYT 2432

Query: 214  LVVVATDTG--------------------NPPRQASVPAIMHFP 237
            LVVVA+D G                    NPPR    P + H P
Sbjct: 2433 LVVVASDAGSPEPLSSSTSVLVTVTDVNDNPPRFQHHPYVTHIP 2476



 Score = 47.8 bits (112), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 71/237 (29%), Positives = 104/237 (43%), Gaps = 22/237 (9%)

Query: 11  ITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNE-YSVSALENLPVNYVLLTVTT 69
           I L + A       + + A L+V+    +  +  FS+ E Y+VS +EN P    LL +  
Sbjct: 548 IVLNISARDQGVHPKVSYAQLVVTLLDVNDEKPVFSQPEGYNVSVVENAPTGTELLVLGA 607

Query: 70  NKPRDL----RVKYWLSNDYGERFSISR---QGDISLMQCLDYETEDSYRFTVYATDT-- 120
               DL     V++ L     ++ S       G +S +  LD E +  Y   V ATD   
Sbjct: 608 TD-GDLGDNGTVRFSLQEAETDQRSFRLDPVSGRLSTISSLDREEQAFYSLLVLATDMGS 666

Query: 121 -LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRV 179
              ++   +N+S++++ND  P F   QY     HI   +   GS I  V A D D G   
Sbjct: 667 PPQSSMVRINVSLLDINDNSPVFYPVQY---FAHI-QENEPGGSYITTVSATDPDLGLNG 722

Query: 180 TL--SLRGPYEKMFSIN-DSGHISI-VDLSALNTSTIQLVVVATDTGN--PPRQASV 230
           T+  S+       F +N  SG IS  + L     +  QL +VATD GN   P QA V
Sbjct: 723 TIKYSISAGDRSRFQVNAQSGVISTRMALDREEKTAYQLQIVATDGGNLQSPNQAIV 779



 Score = 46.6 bits (109), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 47/172 (27%), Positives = 79/172 (45%), Gaps = 17/172 (9%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGERFSIS-RQGDISLM 100
            F  +EY  + LEN P    ++ +     +   +  + Y + +   + F I    G ++  
Sbjct: 3194 FLPDEYFPTVLENAPSGTTVIHLNATDADSGTNAVIAYTIQSSDSDLFVIDPNTGVVTTQ 3253

Query: 101  QCLDYETEDSYRFTVYA---TDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLA 157
              LD+ET+ SY  TV A    D    + ATVNI +   N++ PRF    Y     +  ++
Sbjct: 3254 GFLDFETKQSYHLTVKAFNVPDEERCSFATVNIQLKGTNEYVPRFVSKLY-----YFEIS 3308

Query: 158  DLTP-GSVIGKVEAAD---GDKGDRVTLSLRGPYEKMFSIN-DSGHISIVDL 204
            +  P G+++G+V A+D   G  G+   L      +K F IN  +G I +  L
Sbjct: 3309 EAAPTGTIVGEVFASDRDLGSDGEVHYLIFGNSRKKGFQINKKTGQIYVSGL 3360



 Score = 43.1 bits (100), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 42/142 (29%), Positives = 71/142 (50%), Gaps = 14/142 (9%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLR----VKYWLSNDYGER-FSI-SRQGDI 97
            +FS++  S +  E+  V  ++ TV+  + RD      ++Y +S+   E  F+I S  G +
Sbjct: 3088 EFSQSHMSATIPESHSVGAIVRTVSA-RDRDTAMNGLIRYSISSGNEEGIFAINSSTGVL 3146

Query: 98   SLMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHI 154
            +L + LDYE    +  TV ATD      T   +V ++V++VND  P F   +Y    P +
Sbjct: 3147 TLAKALDYELCQKHEMTVSATDGGWVSRTGYCSVTVNVIDVNDNSPVFLPDEY---FPTV 3203

Query: 155  PLADLTPGSVIGKVEAADGDKG 176
             L +   G+ +  + A D D G
Sbjct: 3204 -LENAPSGTTVIHLNATDADSG 3224



 Score = 40.0 bits (92), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 55/108 (50%), Gaps = 7/108 (6%)

Query: 89   FSISRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYP 145
            FS++  G +S  + +D E    +  +V   D+    M+++ TV+I+V++ ND   + R  
Sbjct: 3558 FSLNTAGVLSTTREIDREQISDFYLSVVTRDSGVPQMSSTGTVHITVIDQNDNPSQSR-- 3615

Query: 146  QYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSI 193
              E+F+ +    +L PG V+G V+  D D  D    SL      +FSI
Sbjct: 3616 TVEIFVNY--YGNLFPGGVLGSVKPQDPDVLDTFHCSLTSGVTSLFSI 3661


>gi|157649929|gb|ABV59354.1| protocadherin nu7 [Callorhinchus milii]
          Length = 979

 Score = 68.9 bits (167), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 78/306 (25%), Positives = 135/306 (44%), Gaps = 34/306 (11%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTTNKP---RDLRVKYWLSNDYGERFSIS-------R 93
           +F++  Y    +EN  V   + +V+   P   ++ R+ Y +        S+S        
Sbjct: 452 RFAQPLYREHVMENNAVGTSMFSVSAFDPDFNQNGRLTYSIPESQVRAESVSTYVYINSE 511

Query: 94  QGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRF--RYPQYE 148
            G I   +  D+E   S++FTV A D     +T++A+V++++V+ ND  P      P++ 
Sbjct: 512 NGIIYSRRSFDFEQMKSFQFTVQAQDNGSPPLTSNASVDVTIVDQNDNAPVIVSPLPEFG 571

Query: 149 LFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-DSGHI-SIVD 203
             +         PG ++ KV A D D G    LS   ++     +F+I+ D+G I +I  
Sbjct: 572 STVTETVSRLAEPGYLVAKVSAIDADTGQNGRLSYQIVQATDPGLFTISPDTGEIWTIRS 631

Query: 204 LSALNTSTIQLVVVATDTGNPPRQASVPAIMHFPEAIVQQASSK--------LNSGTSST 255
           + + +    +LV+V  D GNP   A+V  I+       +  S          L S  S  
Sbjct: 632 VVSKDADQQRLVIVVKDNGNPSLSATVTIILSIEGRDTEMLSDASGLSEDPWLTSDVSIY 691

Query: 256 VLIILGVVLIVLGFVIILLILYIHKNKHTKNNGPPGSSHSKNDSF------LSNVILPEK 309
           ++I LG+   V   V+ILL L +HKN++   +G         DS         N+ +P+ 
Sbjct: 692 LVISLGITSSVFLVVLILLALKVHKNRNGFGHGVTCRCLEARDSLNGIQKASRNIHIPQN 751

Query: 310 HVNVVA 315
           +V V  
Sbjct: 752 YVEVFG 757



 Score = 46.6 bits (109), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 51/197 (25%), Positives = 84/197 (42%), Gaps = 20/197 (10%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRD-------LRVKYWLSNDYGERFSI-SRQGD 96
           F+ + Y+VS LEN P   +++ V      D            + S    E F++ S+ G+
Sbjct: 240 FTDSVYTVSLLENTPRGTLVIRVNATDLDDGNNGEIVYSFSGYTSAKVREIFTVDSKTGE 299

Query: 97  ISLMQCLDYETEDSYRFTVYATDT-LMTTSATVNI--SVVNVNDWDPRFRYPQYELFLPH 153
           I +   LDYE  + +   + A D  L    A  N+  ++++VND  P        LF P 
Sbjct: 300 IRVKGNLDYEEFNVFEINIEAIDRGLYAIPAYCNVLVNIIDVNDNSPEVTL--NSLFSPI 357

Query: 154 IPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSGH-----ISIVDLSALN 208
               D  PG+V+  + A D D G+   +  + P+   F ++ S       ++   L    
Sbjct: 358 --REDSLPGTVVALISAGDKDSGEYGQVQCQIPHNLPFKLDLSSRKYFRLLTQGTLDRET 415

Query: 209 TSTIQLVVVATDTGNPP 225
            S   + VV +D G PP
Sbjct: 416 ASEYDVTVVCSDRGTPP 432


>gi|149017351|gb|EDL76402.1| rCG49295, isoform CRA_al [Rattus norvegicus]
          Length = 761

 Score = 68.9 bits (167), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 65/230 (28%), Positives = 102/230 (44%), Gaps = 22/230 (9%)

Query: 13  LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKP 72
           LV+ A+   N  R   A L VS    +     F ++ Y +S LE+ P   VL+ +  + P
Sbjct: 95  LVLTAVDGGNPPRSGTAELRVSVLDVNDNAPAFQQSSYRISVLESAPAGMVLIQLNASDP 154

Query: 73  RDL----RVKYWLSNDYGER----FSI-SRQGDISLMQCLDYETEDSYRFTVYATD---T 120
            DL     V +  S    +R    FS+    G ++L   LD+E+E+ Y F V A D    
Sbjct: 155 -DLGPSGNVTFSFSGHTPDRVRNLFSLHPTTGKLTLQGPLDFESENYYEFDVRARDGGSP 213

Query: 121 LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVT 180
            M    ++ + +++VND  P          LP        PG+V+  +   D D G    
Sbjct: 214 AMEQHCSLRVDLLDVNDNAPHITVTSELGTLPE----SAEPGTVVALISVQDPDSGSNGD 269

Query: 181 LSLRGPYEKMFSINDS--GHISIVDLSALN---TSTIQLVVVATDTGNPP 225
           +SLR P    F++  +     S+V    L+    S+  ++V A+D GNPP
Sbjct: 270 VSLRIPDHLPFALKSAFRNQFSLVTAGPLDREARSSYDIMVTASDAGNPP 319



 Score = 44.7 bits (104), Expect = 0.073,   Method: Compositional matrix adjust.
 Identities = 44/169 (26%), Positives = 77/169 (45%), Gaps = 27/169 (15%)

Query: 77  VKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVV 133
           + + L + +  +FS+   G       LD E   SY   V A+D     ++T  T+ +++ 
Sbjct: 278 LPFALKSAFRNQFSLVTAGP------LDREARSSYDIMVTASDAGNPPLSTHRTIFLNIS 331

Query: 134 NVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMF 191
           +VND  P F    +E+F+P     +  PG ++  + A+D D G    ++ SL  P  +  
Sbjct: 332 DVNDNPPSFFQRSHEVFVPE----NNRPGDLLCSLAASDPDSGLNALISYSLLEPRNR-- 385

Query: 192 SINDSGHISIVDLSAL----------NTSTIQLVVVATDTGNPPRQASV 230
            ++ S  IS+   +             T T+Q  V A D G+PP  ++V
Sbjct: 386 DVSASSFISLNPQTGAVHATRSFDYEQTQTLQFEVQARDRGSPPLSSTV 434



 Score = 43.5 bits (101), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 49/190 (25%), Positives = 83/190 (43%), Gaps = 15/190 (7%)

Query: 95  GDISLMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYEL-- 149
           G +   +  DYE   + +F V A D     ++++ TV + V+++ND  P    P+     
Sbjct: 400 GAVHATRSFDYEQTQTLQFEVQARDRGSPPLSSTVTVRLFVLDLNDNAPAVLRPRARPGS 459

Query: 150 FLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIND-SGHISIVDLS 205
             P      +  G ++ KV A D D G    +S   L  P   +F+++  +G +      
Sbjct: 460 LCPQALPPSVGAGHLVTKVTAVDLDSGYNAWVSYQLLEAPDPSLFAVSRYAGEVRTAVPI 519

Query: 206 ALNTSTIQLVVVATDTGNPPRQASVPAIMHFPE---AIVQ--QASSKLNSGTSSTVLIIL 260
             +    +LV+V  D+G+PP   SV  ++   E    +V   + SS    G S   L  L
Sbjct: 520 PADLPPQKLVIVVKDSGSPPLSTSVTLLVSLEEDTHPVVPDLRESSAPREGESRLTL-YL 578

Query: 261 GVVLIVLGFV 270
            V L+ + FV
Sbjct: 579 AVSLVAICFV 588


>gi|297676253|ref|XP_002816048.1| PREDICTED: protocadherin gamma-A5 [Pongo abelii]
          Length = 813

 Score = 68.9 bits (167), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 63/197 (31%), Positives = 93/197 (47%), Gaps = 23/197 (11%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWLSND---YGERFSI-SRQGDI 97
           F+++EYSVS  EN+PV   LLT+T   P +    ++ Y   N+     E F + S  G+I
Sbjct: 242 FTQSEYSVSVPENIPVGTRLLTLTATDPDEGINGKLTYSFRNEEDKISETFQLDSNLGEI 301

Query: 98  SLMQCLDYETEDSYRFTVYATD-TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
           S +Q LDYE    Y   V A D   +  SA V ++V +VND  P       E+ L  +  
Sbjct: 302 STLQSLDYEESRFYLMEVVAQDGGALVASAKVVVTVQDVNDNAP-------EVILTSLTS 354

Query: 157 A---DLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMF----SINDSGH-ISIVDLSALN 208
           +   D  PG+VI      DGD G+   ++   P    F    S+++  H ++  DL    
Sbjct: 355 SLSEDCLPGAVIALFSVHDGDSGENGEIACSIPRNLPFKLEKSVDNYYHLLTTRDLDREE 414

Query: 209 TSTIQLVVVATDTGNPP 225
           TS   + +   D G PP
Sbjct: 415 TSDYNITLTVIDHGTPP 431



 Score = 46.6 bits (109), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 73/285 (25%), Positives = 121/285 (42%), Gaps = 48/285 (16%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPR---DLRVKYWLSNDYGERFSISR-------Q 94
           F +  YS S  EN P    + +VT + P    + RV Y L+ D  +   +S         
Sbjct: 452 FPQASYSTSLPENNPRGVSIFSVTAHDPDSGDNARVTYSLAEDTFQGAPLSSYVSINSDT 511

Query: 95  GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFL 151
           G +  ++  DYE     +  V A+D+    ++++ ++++ V++ ND  P   YP     L
Sbjct: 512 GVLYALRSFDYEQLRDLQLWVTASDSGNPPLSSNVSLSLFVLDQNDNAPEILYPA----L 567

Query: 152 P-----HIPLADLT--PGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-DSGHI- 199
           P      + LA  +  PG ++ KV A D D G    LS   L+     +F +   +G + 
Sbjct: 568 PTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYRLLKASEPGLFVVGLHTGEVR 627

Query: 200 ---SIVDLSALNTSTIQLVVVATDTGNPPRQASVPAIM----HFPEAIVQQASSKLNSGT 252
              +++D  AL  S    VV   D G PP  A+V   +      P+ +    S K     
Sbjct: 628 TARALLDRDALKQS---FVVAVEDHGQPPLSATVTVTVAVADRIPDILADLGSIKTPIDP 684

Query: 253 SSTVLII------LGVVLIVLGFVIILLILYI---HKNKHTKNNG 288
               L +        V  + L FVI+LL+L +   HK++  +  G
Sbjct: 685 EDLDLTLYLVVAVAAVSCVFLAFVIVLLVLRLRRWHKSRLLQTEG 729



 Score = 43.1 bits (100), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 45/141 (31%), Positives = 62/141 (43%), Gaps = 17/141 (12%)

Query: 103 LDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADL 159
           LD E    Y  T+   D     ++T + + + V +VND  P F    Y   LP     + 
Sbjct: 410 LDREETSDYNITLTVIDHGTPPLSTESHIPLKVADVNDNPPNFPQASYSTSLPE----NN 465

Query: 160 TPGSVIGKVEAADGDKGD--RVTLSLR------GPYEKMFSIN-DSGHI-SIVDLSALNT 209
             G  I  V A D D GD  RVT SL        P     SIN D+G + ++        
Sbjct: 466 PRGVSIFSVTAHDPDSGDNARVTYSLAEDTFQGAPLSSYVSINSDTGVLYALRSFDYEQL 525

Query: 210 STIQLVVVATDTGNPPRQASV 230
             +QL V A+D+GNPP  ++V
Sbjct: 526 RDLQLWVTASDSGNPPLSSNV 546


>gi|297674308|ref|XP_002815174.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 4 [Pongo abelii]
          Length = 5022

 Score = 68.9 bits (167), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 77/258 (29%), Positives = 116/258 (44%), Gaps = 44/258 (17%)

Query: 2    INEDD-----FLQPITLV---VRAIQYDNQDRYALATLIVSKAGTSLRELQ--------- 44
            +NEDD     FL PIT V    R + Y+ Q  Y L T+     G     ++         
Sbjct: 1880 VNEDDEDGIFFLNPITGVFNLTRLLDYEVQQYYIL-TVRAEDGGGQFTTIRVYFNILDIN 1938

Query: 45   -----FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWL-SNDYGERFSISRQG 95
                 FS N YS S +ENLPV   +L        D    ++ Y + S D   +F++ + G
Sbjct: 1939 DNPPIFSLNSYSTSLMENLPVGSTVLVFNVTDADDGINSQLTYSIASGDSLGQFTVDKNG 1998

Query: 96   DISLMQCLDYETEDSYRFTVYATD------TLMTTSATVNISVVNVNDWDPRFRYPQYEL 149
             + +++ LD E++  Y   V   D      +  T++A V+I +++VND  P F  P+   
Sbjct: 1999 VLKVLKALDRESQSFYNLVVQVHDLPQIPASRFTSTAQVSIILLDVNDNPPTFLSPK--- 2055

Query: 150  FLPHIPLADLTP-GSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIND-SGHISIV-DL 204
             L +IP  + TP  +V+ K +A D D G    +  +L  P    FSI    G + +  +L
Sbjct: 2056 -LTYIP--ENTPIDTVVFKAQATDPDSGPNSYIEYTLLNPLGNKFSIGTIDGEVRLTGEL 2112

Query: 205  SALNTSTIQLVVVATDTG 222
                 S   L VVATD G
Sbjct: 2113 DREEVSNYTLTVVATDKG 2130



 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 57/183 (31%), Positives = 89/183 (48%), Gaps = 16/183 (8%)

Query: 56   ENLPVNYVLLTVTTNKPR---DLRVKYWLSNDYGERFSISR-QGDISLMQCLDYETEDSY 111
            EN P++ V+       P    +  ++Y L N  G +FSI    G++ L   LD E   +Y
Sbjct: 2061 ENTPIDTVVFKAQATDPDSGPNSYIEYTLLNPLGNKFSIGTIDGEVRLTGELDREEVSNY 2120

Query: 112  RFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKV 168
              TV ATD     +++S  V + V+++ND +P F    Y++ +    L     G+ I +V
Sbjct: 2121 TLTVVATDKGQQSLSSSTEVVVMVLDINDNNPIFAQALYKVEINENTLT----GTDIIQV 2176

Query: 169  EAADGDKGDRVTLS---LRGPYEKMFSIND-SGHISIVD-LSALNTSTIQLVVVATDTGN 223
             AADGD+G    +    + G   + F I+  +G I++   L    T T  L V ATD G+
Sbjct: 2177 FAADGDEGTNGQVRYGIVNGNTNQEFRIDSVTGAITVAKPLDREKTPTYHLTVQATDRGS 2236

Query: 224  PPR 226
             PR
Sbjct: 2237 TPR 2239



 Score = 57.8 bits (138), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 47/158 (29%), Positives = 82/158 (51%), Gaps = 13/158 (8%)

Query: 87   ERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDTL---MTTSATVNISVVNVNDWDPRF 142
             +F+I S  G ++L+  LDYE   +Y   + A D+    + ++ T+NI +++ ND  P F
Sbjct: 1256 RQFAIDSTSGQVALIGKLDYEATPAYSLVIQAVDSGTIPLNSTCTLNIDILDENDNTPSF 1315

Query: 143  RYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTL--SLRGPY-EKMFSIN-DSGH 198
              P+  LF+    L ++  G ++  V A D D GD   L  S+ G      FSI+ ++G 
Sbjct: 1316 --PKSTLFVD--VLENMRIGELVSSVTATDSDSGDNADLYYSITGTNNHGTFSISPNTGS 1371

Query: 199  ISIVDLSALNTSTI-QLVVVATDTGNPPRQASVPAIMH 235
            I +       T ++ +L + A D G PPR +++  ++H
Sbjct: 1372 IFLAKKLDFETQSLYKLNITAKDQGRPPRSSTMSVVIH 1409



 Score = 55.8 bits (133), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 60/192 (31%), Positives = 91/192 (47%), Gaps = 24/192 (12%)

Query: 50   YSVSALENLPVNYVLLTVTTNKPRDLRV----KYWLSNDYGERFSIS-RQGDISLMQCLD 104
            +S    EN P+ Y +  VTT+   D+ +    +Y +  D    F+I+   GDI + + L+
Sbjct: 2819 FSAHVPENSPLGYTVTRVTTSD-EDIGINAISRYSIM-DTSLPFTINPSTGDIIISRPLN 2876

Query: 105  YETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSV 164
             E  D YR  V A D+  T S  V I V +VND  PRF  P Y L  P   L ++  GS 
Sbjct: 2877 REDTDRYRIRVSAHDSGWTVSTDVTIFVTDVNDNAPRFSRPSYYLDCPE--LTEI--GSK 2932

Query: 165  IGKVEAADGDKGD--RVTLSLRGPYEKMFSIN-DSGHI---------SIVDLSALNTSTI 212
            + +V A D D+G   +V   ++   E  F IN  +G I         ++   S +N +  
Sbjct: 2933 VTQVFATDPDEGSNGQVFYFIKSQSE-YFRINATTGEIFNKQILKYQNVTGFSNVNINRH 2991

Query: 213  QLVVVATDTGNP 224
              +V ++D G P
Sbjct: 2992 SFIVTSSDRGKP 3003



 Score = 54.7 bits (130), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 57/190 (30%), Positives = 95/190 (50%), Gaps = 15/190 (7%)

Query: 56   ENLPVNYVLLTVTTNKPRDLRVKYWL-SNDYGERFSISR-QGDISLMQCLDYETEDSYRF 113
            EN PV+ ++ T+T +  R   + Y++ S + G  F I +  G +S+ Q LD+E    Y  
Sbjct: 2620 ENQPVSSLVTTITGSSLRGEPMSYYIASGNLGNTFQIDQLTGQVSISQPLDFEKIQKYVV 2679

Query: 114  TVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEA 170
             + A D      ++   ++I+V++VND  P F+    + F+  I L +L+P  ++  V A
Sbjct: 2680 WIEARDGGFPPFSSYEKLDITVLDVNDNAPIFK---EDPFISEI-LENLSPRKIL-TVSA 2734

Query: 171  ADGDKGDRVTLS---LRGPYEKMFSINDS-GHI-SIVDLSALNTSTIQLVVVATDTGNPP 225
             D D G    L    + G  E  FSIN + G I SI  L     S   L + ++D G+P 
Sbjct: 2735 MDKDSGPNGQLDYEIVNGNMENSFSINHATGEIRSIRPLDREKVSHYVLTIKSSDKGSPS 2794

Query: 226  RQASVPAIMH 235
            +  SV  +++
Sbjct: 2795 QSTSVKVMIN 2804



 Score = 54.3 bits (129), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 58/198 (29%), Positives = 88/198 (44%), Gaps = 24/198 (12%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLS-NDYGERFSISRQGDISLM 100
            F +  Y V+  E+ PVN     V     +   +  + Y ++  + G+ F I   G + + 
Sbjct: 996  FDQLSYEVTLSESEPVNSRFFKVQASDKDSGANGEIAYTIAEGNTGDAFGIFPDGQLYIK 1055

Query: 101  QCLDYETEDSYRFTVYATDTLMTT-SATVNISVV--NVNDWDPRFRYPQYELFLPHIPLA 157
              LD E +D Y   V A+D  +   SATVN++V+  +VND  P F    Y  +      A
Sbjct: 1056 SELDRELQDRYVLMVVASDRAVEPLSATVNVTVILEDVNDNRPLFNSTNYTFYFEEEQRA 1115

Query: 158  DLTPGSVIGKVEAADGDKGD----RVTLSLRGPYEKMFSINDSGHIS---IVDLSAL--- 207
                GS +GKV A D D G     R +  +  P  ++ +I  SG I+     D  +L   
Sbjct: 1116 ----GSFVGKVSAVDKDFGPNGEVRYSFEMVQPDFELHAI--SGEITNTHQFDRESLMRR 1169

Query: 208  -NTSTIQLVVVATDTGNP 224
              T+     V+ATD G P
Sbjct: 1170 RGTAVFSFTVIATDQGLP 1187



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/101 (32%), Positives = 48/101 (47%), Gaps = 5/101 (4%)

Query: 77   VKYWLSNDYGERFSIS-RQGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNV 135
            V Y + +   + F I    GD+   + LD E    Y   V A D L ++   +NI+V +V
Sbjct: 1775 VTYTIISGADDSFRIDPESGDLIATRRLDRERRSKYSLLVRADDGLQSSDMRINITVSDV 1834

Query: 136  NDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG 176
            ND  P+F  P Y   +P     D  PGS++  + A D D G
Sbjct: 1835 NDHTPKFSRPVYSFDIPE----DTIPGSLVAAILATDDDSG 1871



 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 74/237 (31%), Positives = 104/237 (43%), Gaps = 22/237 (9%)

Query: 11  ITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNE-YSVSALENLPVNYVLLTVTT 69
           I L + A       + + A L+V+    +  +  FS+ E Y VS +EN P    LL +  
Sbjct: 548 IVLNISARDQGVHPKVSYAQLVVTLLDVNDEKPVFSQPEGYDVSVVENAPTGTELLMLRA 607

Query: 70  NKPRDL----RVKYWLSNDYGERFSISR---QGDISLMQCLDYETEDSYRFTVYATD--- 119
               DL     V++ L     +R S       G +S +  LD E +  Y   V ATD   
Sbjct: 608 TD-GDLGDNGTVRFSLQEAETDRRSFRLDPVSGRLSTISSLDREEQAFYSLLVLATDLGS 666

Query: 120 TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRV 179
              ++ A +N+S++++ND  P F   QY     HI   +   GS I  V A D D G   
Sbjct: 667 PPQSSMARINVSLLDINDNSPVFYPVQY---FAHIK-ENEPGGSYITTVSATDPDLGTNG 722

Query: 180 TL--SLRGPYEKMFSIN-DSGHISI-VDLSALNTSTIQLVVVATDTGN--PPRQASV 230
           T+  S+       F +N  SG IS  + L     +  QL VVATD GN   P QA V
Sbjct: 723 TVKYSISAGDRSRFQVNAQSGVISTRMALDREEKTAYQLQVVATDGGNLQSPNQAIV 779



 Score = 51.6 bits (122), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 51/193 (26%), Positives = 96/193 (49%), Gaps = 12/193 (6%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRDLR--VKYWLS-NDYGERFSISR-QGDISLM 100
           FS+  YS    EN+ + Y + +V+ +   DL   + Y ++  D    F+I+   G ++  
Sbjct: 793 FSQVAYSFVVFENVALGYHVGSVSAST-MDLNSNISYLITTGDQKGMFAINHVTGQLTTA 851

Query: 101 QCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLT 160
             +D E +  Y+  V A+   +T    VNI+V ++ND  P F      + +    + +  
Sbjct: 852 NVIDREEQSFYQLKVVASGGTVTGDTMVNITVKDLNDNSPHFLQAIESVNV----VENWQ 907

Query: 161 PGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIND-SGHISIVDLSALNTSTIQLVVV 217
            G  I + +A D D+G    V  SL+   + +F+IN+ +G IS++    ++  + Q+ ++
Sbjct: 908 AGHSIFQAKAVDPDEGVNGMVLYSLKQNPKNLFAINEKNGTISLLGPLDVHAGSYQIEIL 967

Query: 218 ATDTGNPPRQASV 230
           A+D G P   +SV
Sbjct: 968 ASDMGVPQLSSSV 980



 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 48/149 (32%), Positives = 69/149 (46%), Gaps = 12/149 (8%)

Query: 95   GDISLMQCLDYETEDSYRFTVYATDTL----MTTSATVNISVVNVNDWDPRFRYPQYELF 150
            G I     LD ET+D+Y   V  +D      +++S +V ++V +VND  PRF   Q+  +
Sbjct: 2457 GQIITSALLDRETKDNYTLVVVCSDAGSPEPLSSSTSVLVTVTDVNDNPPRF---QHHPY 2513

Query: 151  LPHIPLADLTPGSVIGKVEAADGDKGDRVTL--SLRGPYEKMFSINDSGHISIVDLSALN 208
            + HIP   L PGS +  V   D D G    L  SL G   + F I D    +I+    LN
Sbjct: 2514 VTHIPSPTL-PGSFVFAVTVTDADIGPNSELHYSLSGRNSEKFHI-DPLRGAIMAAGPLN 2571

Query: 209  -TSTIQLVVVATDTGNPPRQASVPAIMHF 236
              S +   V   D G+ P+  S    + F
Sbjct: 2572 GASEVTFSVHVKDGGSFPKTDSTTVTVRF 2600



 Score = 44.7 bits (104), Expect = 0.072,   Method: Compositional matrix adjust.
 Identities = 43/161 (26%), Positives = 74/161 (45%), Gaps = 16/161 (9%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGERFSIS-RQGDISLM 100
            F  ++Y  + LEN P    ++ +     +   +  + Y + +   + F I    G I+  
Sbjct: 3236 FLSDDYFPTVLENAPSGTTVIHLNATDADSGTNAVIAYTIQSSDSDLFVIDPNTGVITTQ 3295

Query: 101  QCLDYETEDSYRFTVYA---TDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLA 157
              LD+ET+ SY  TV A    D    + ATVN+ +   N++ PRF    Y     +  ++
Sbjct: 3296 GFLDFETKQSYHLTVKAFNVPDEERCSFATVNVQLKGTNEYVPRFVSKLY-----YFEIS 3350

Query: 158  DLTP-GSVIGKVEAAD---GDKGDRVTLSLRGPYEKMFSIN 194
            +  P G+++G+V A+D   G  G+   L      +K F IN
Sbjct: 3351 EAAPKGTIVGEVFASDRDLGTDGEVRYLIFGNSRKKGFQIN 3391



 Score = 40.8 bits (94), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 55/108 (50%), Gaps = 7/108 (6%)

Query: 89   FSISRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYP 145
            FS+S  G +S  + +D E    +  +V   D+    M+++ TV+I+V++ ND   + R  
Sbjct: 3600 FSLSTAGVLSTTREIDREQIADFYLSVVTKDSGVPQMSSTGTVHITVIDQNDNPSQSR-- 3657

Query: 146  QYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSI 193
              E+F+ +    +L PG ++G V+  D D  D    SL      +FSI
Sbjct: 3658 TVEIFVNY--YGNLFPGGILGSVKPQDPDVLDSFHCSLTSGVTSLFSI 3703


>gi|260788463|ref|XP_002589269.1| hypothetical protein BRAFLDRAFT_130073 [Branchiostoma floridae]
 gi|229274445|gb|EEN45280.1| hypothetical protein BRAFLDRAFT_130073 [Branchiostoma floridae]
          Length = 2821

 Score = 68.9 bits (167), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 69/221 (31%), Positives = 112/221 (50%), Gaps = 20/221 (9%)

Query: 25  RYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDL----RVKYW 80
           R A ATL +     +  + +F +N Y  + LE + +   +LTV     +D+     ++Y 
Sbjct: 423 RSATATLQIDILDMNDHDPEFEENSYREAVLEGIEIGSNVLTVRATD-QDIGPNSDIRYS 481

Query: 81  LSNDYGER--FSISRQ-GDISLMQCLDYETEDSYRFTVYATDTLM---TTSATVNISVVN 134
           + N  G    F ISR+ G I+  + LD ET  SYR  V A+D      T+   V I+V++
Sbjct: 482 IINPSGTNTAFQISRRDGVITTTEALDRETTASYRLEVRASDQGTPPRTSDVVVTITVLD 541

Query: 135 VNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSL-RGPYEKMF 191
            ND +P+F    Y   +P     ++ P +VI  V A D D+G   ++  SL  G  +  F
Sbjct: 542 ENDNEPQFEQQSYAKDVPE----NVRPDTVIQTVAATDPDEGTNSQIRYSLIGGNSQGHF 597

Query: 192 SINDS-GHISIV-DLSALNTSTIQLVVVATDTGNPPRQASV 230
           +I+ + G IS++ +L   +T   +L+V A D+G P   +SV
Sbjct: 598 TIDSATGDISVITNLDFESTPRYRLIVKAQDSGRPSMWSSV 638



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 61/202 (30%), Positives = 95/202 (47%), Gaps = 17/202 (8%)

Query: 42  ELQFSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWL--SNDYGERFSISRQGD 96
           E QF +  Y+    EN+  + V+ TV    P +    +++Y L   N  G     S  GD
Sbjct: 546 EPQFEQQSYAKDVPENVRPDTVIQTVAATDPDEGTNSQIRYSLIGGNSQGHFTIDSATGD 605

Query: 97  ISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
           IS++  LD+E+   YR  V A D+    M +S  + +SV++VND DP+F    +E  +  
Sbjct: 606 ISVITNLDFESTPRYRLIVKAQDSGRPSMWSSVVLTVSVIDVNDHDPQFVSTPFETSV-- 663

Query: 154 IPLADLTPGSVIGKVEAADGDKGD--RVTLSLRG-PYEKMFSIN-DSGHI-SIVDLSALN 208
               D+  G  +  ++A D D G    +T SL   P    F I+ D+G I +  +L    
Sbjct: 664 --FEDVRVGFSVIHIQAIDADSGSNAELTYSLANVPARMPFEIDGDTGWIVTNAELDREA 721

Query: 209 TSTIQLVVVATDTGNPPRQASV 230
            +     V A D G+P R A+ 
Sbjct: 722 HAIYDFNVQAADQGSPARTAAA 743



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 56/189 (29%), Positives = 89/189 (47%), Gaps = 11/189 (5%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRDL-RVKYWLSN-DYGERFSISRQ---GDISL 99
           F+   Y ++  E+      +LTVT N   ++  V Y ++  +   RFSI+ Q   G IS+
Sbjct: 759 FNPKVYYINVPEDANPGTSVLTVTANDADEVGTVSYQITGGNVRNRFSITSQNGLGTISV 818

Query: 100 MQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADL 159
              LDY+ E  +  TV ATD +++  A V I++ + N   P F+   Y +++      D+
Sbjct: 819 ALPLDYKQETRFVLTVQATDRMLSDDAQVYINITDANTHRPVFQQSPYSVYVDE----DV 874

Query: 160 TPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDS-GHISIVD-LSALNTSTIQLVVV 217
             G+ I  V A DGD+G+   +S        F I  S G I     L     ++  + V 
Sbjct: 875 PIGTTILVVSATDGDEGENARISYSMDILNAFEIEPSTGAIKTKQRLDHEAQASFAVSVT 934

Query: 218 ATDTGNPPR 226
           ATD G P +
Sbjct: 935 ATDHGVPSK 943



 Score = 46.6 bits (109), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 57/204 (27%), Positives = 90/204 (44%), Gaps = 21/204 (10%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGERFSIS-RQGDISLM 100
            F ++ YSV   E++P+   +L V+    ++  + R+ Y  S D    F I    G I   
Sbjct: 861  FQQSPYSVYVDEDVPIGTTILVVSATDGDEGENARISY--SMDILNAFEIEPSTGAIKTK 918

Query: 101  QCLDYETEDSYRFTVYATDTLMTT---SATVNISVVNVNDWDPRFRYPQYELFLPHIPLA 157
            Q LD+E + S+  +V ATD  + +    + V+I V +VND  P F    Y   +      
Sbjct: 919  QRLDHEAQASFAVSVTATDHGVPSKFDESYVDIIVNDVNDNAPVFLLESYSGSVRE---- 974

Query: 158  DLTPGSVIGKVEAADGDKGD----RVTLSLRGPYEKMFSINDSGHISIVDLSALNTSTI- 212
            D + G+ + ++ A D D G     R T +     E  F I++   I   D   L+   I 
Sbjct: 975  DCSRGTSVTQISATDADSGTNGQIRYTFTGGDNGEDAFVIDERSGIIRTD-KRLDRELIP 1033

Query: 213  --QLVVVATDTGNPPRQASVPAIM 234
               LV  A D G P ++  V  I+
Sbjct: 1034 VYNLVAYAEDQGQPEQKTPVDIIV 1057



 Score = 40.4 bits (93), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 50/185 (27%), Positives = 81/185 (43%), Gaps = 12/185 (6%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTTNKP---RDLRVKYWLS-NDYGERFSIS-RQGDIS 98
            QF  +   +   EN  V  V+  +T N P   ++  V Y+++  +  E F +    G++ 
Sbjct: 1068 QFPSDTIDIYVPENRVVGSVVARITANDPDEGQNAEVMYYITKGNNPELFQLDIFSGELV 1127

Query: 99   LMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLAD 158
             +  LDYE  + Y  TV A    + + A VNI + + ND  P  +   +E+   +    +
Sbjct: 1128 TLIDLDYEARNFYEITVQARSMPLFSEAIVNIHIQDENDNIPVLQ--DFEIVFNN--YRN 1183

Query: 159  LTPGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSINDS-GHISIV-DLSALNTSTIQLV 215
              P   IG++ A D D  DR+  S   G    +  +N S G I +   L +      QL 
Sbjct: 1184 HFPTDYIGRIPAFDPDVSDRLAYSFTFGNNANLLHLNQSTGEIKLSPQLDSDRAFEAQLG 1243

Query: 216  VVATD 220
            V  TD
Sbjct: 1244 VSVTD 1248


>gi|157649930|gb|ABV59355.1| protocadherin nu8 [Callorhinchus milii]
          Length = 987

 Score = 68.9 bits (167), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 73/268 (27%), Positives = 129/268 (48%), Gaps = 28/268 (10%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTTNKP---RDLRVKYWL--SNDYGERFS----ISRQ 94
           +F++  Y+   +EN  +   + +VT+  P   ++ R+ Y +  S   GE  S    I+++
Sbjct: 452 RFTQPVYTAQVMENNVIGASIFSVTSVDPDFNQNARLTYSILESQIQGESVSSYVSINKE 511

Query: 95  -GDISLMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRF--RYPQYE 148
            G IS  +  DYE   S++  V A D     + ++A+V+I +++ ND  P      P+Y 
Sbjct: 512 NGVISSQRSFDYEQLKSFQIQVQAQDNGEAPLASNASVDIIILDQNDNAPVIVSPIPEYG 571

Query: 149 LFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-DSGHI-SIVD 203
             +         PG ++ KV A D D G    L+   L+     +F+I+ D+G+I +I  
Sbjct: 572 STVTETVSRLAEPGYLVAKVSATDADTGQNGRLTYQILKATNPGLFTISSDTGNIWTIRR 631

Query: 204 LSALNTSTIQLVVVATDTGNPPRQASVPAIMHFPEAIVQQASSK--------LNSGTSST 255
           ++  + S  +LV+V  D G+P   ASV  I+       +  S K          S  S  
Sbjct: 632 MTDHDASKQRLVIVVKDNGSPSLSASVTIILSVEGGDTEMVSDKSELTAEPWFTSDISIY 691

Query: 256 VLIILGVVLIVLGFVIILLILYIHKNKH 283
           ++I LG+   +   V+ILL + IH+N++
Sbjct: 692 LVISLGITSSIFFVVLILLAIKIHRNRN 719



 Score = 46.2 bits (108), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 52/202 (25%), Positives = 88/202 (43%), Gaps = 22/202 (10%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRDL---RVKYWLSNDYGER----FSISRQ-GD 96
           F+++ YS S  EN P   +++ +      D     + Y  S+    R    FS++ Q G+
Sbjct: 240 FTQSVYSTSLSENTPKGTLVIKLNATDLDDGANGEIVYSFSSHTSPRVRQLFSLNSQSGE 299

Query: 97  ISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
           I +   LDYE   ++  T+ A D     +     V I++ +VND       P+  L   +
Sbjct: 300 IRVKGDLDYEESRAFEMTIKAIDRGTHAVPGYCRVFINITDVND-----NAPEVTLTSLY 354

Query: 154 IPL-ADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSGH-----ISIVDLSAL 207
            P+  D  PG+V+  + AAD D G+   +  +   +  F +  +       I+   L   
Sbjct: 355 SPVREDCLPGTVVALINAADKDSGENGQVQCQIANKLPFKLEPTSKKYLRLITQQPLDRE 414

Query: 208 NTSTIQLVVVATDTGNPPRQAS 229
           N S   + VV +D G PP  +S
Sbjct: 415 NISKFDITVVCSDRGIPPLTSS 436


>gi|426247077|ref|XP_004017313.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 4 [Ovis aries]
          Length = 4968

 Score = 68.9 bits (167), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 74/270 (27%), Positives = 122/270 (45%), Gaps = 44/270 (16%)

Query: 2    INEDD-----FLQPITLV---VRAIQYDNQDRYALATLIVSKAGTSLRELQ--------- 44
            +NEDD     FL P+T V    R + Y+ Q  Y L T+     G     ++         
Sbjct: 1867 VNEDDEDGIFFLNPVTGVFNLTRMLDYEAQQYYIL-TVRAEDGGGQFTTIRVYFNILDVN 1925

Query: 45   -----FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWL-SNDYGERFSISRQG 95
                 FS N YS S +ENLP+   +L        D    ++ Y + S D   +F++ + G
Sbjct: 1926 DNPPIFSLNSYSTSLMENLPLGSTVLVFNVTDADDGINSQLAYSIASGDSLGQFTVDKNG 1985

Query: 96   DISLMQCLDYETEDSYRFTVYATD------TLMTTSATVNISVVNVNDWDPRFRYPQYEL 149
             + +++ LD E++  Y   V   D      +  T++A ++I +++VND  P F  P+   
Sbjct: 1986 VLKVLKPLDRESQSFYNLVVQVHDLPQLPASRFTSTAQISIILLDVNDNPPTFLSPK--- 2042

Query: 150  FLPHIPLADLTP-GSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIND-SGHISIV-DL 204
             L +IP  + TP  +++ K +A D D G    +  +L  P    F+I    G + +  +L
Sbjct: 2043 -LTYIP--ENTPIDTIVFKAQATDPDSGPNSYIEYTLLNPLGNKFTIGTIDGEVRLTGEL 2099

Query: 205  SALNTSTIQLVVVATDTGNPPRQASVPAIM 234
                 S   L VVATD G+P   +S   ++
Sbjct: 2100 DREEVSNYTLTVVATDKGHPSLSSSTEVVV 2129



 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 62/192 (32%), Positives = 92/192 (47%), Gaps = 24/192 (12%)

Query: 50   YSVSALENLPVNYVLLTVTTNKPRDLRV----KYWLSNDYGERFSIS-RQGDISLMQCLD 104
            +S    EN P+ Y +  VTT+   D+ V    +Y +  D    F+I+   GDI + + L+
Sbjct: 2764 FSAHVPENSPLGYTVTRVTTSD-EDIGVNAISRYSIM-DTSLPFTINPSTGDIVISRPLN 2821

Query: 105  YETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSV 164
             E  D YR  V A D+  T S  V I V ++ND  PRF  P Y L  P   L ++  GS 
Sbjct: 2822 REDTDRYRIRVSAHDSGWTVSTDVTIFVTDINDNAPRFSRPSYYLDCPE--LTEI--GSK 2877

Query: 165  IGKVEAADGDKGD--RVTLSLRGPYEKMFSINDS-GHI---------SIVDLSALNTSTI 212
            + +V A D D+G   +V   ++   E  F IN S G I         ++   S +N +  
Sbjct: 2878 VTQVSATDPDEGSNGQVFYFIKSQSE-YFRINASTGEIFNKQVLKYQNVSGFSNVNINRH 2936

Query: 213  QLVVVATDTGNP 224
              +V ++D GNP
Sbjct: 2937 SFIVTSSDRGNP 2948



 Score = 58.2 bits (139), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 55/183 (30%), Positives = 89/183 (48%), Gaps = 16/183 (8%)

Query: 56   ENLPVNYVLLTVTTNKPR---DLRVKYWLSNDYGERFSISR-QGDISLMQCLDYETEDSY 111
            EN P++ ++       P    +  ++Y L N  G +F+I    G++ L   LD E   +Y
Sbjct: 2048 ENTPIDTIVFKAQATDPDSGPNSYIEYTLLNPLGNKFTIGTIDGEVRLTGELDREEVSNY 2107

Query: 112  RFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKV 168
              TV ATD     +++S  V + V+++ND +P F    Y++ +    L     G+ I +V
Sbjct: 2108 TLTVVATDKGHPSLSSSTEVVVMVLDINDNNPVFAQAMYKVEINENTLT----GTDIIQV 2163

Query: 169  EAADGDKGDRVTLS---LRGPYEKMFSIND-SGHISIVD-LSALNTSTIQLVVVATDTGN 223
             AADGD+G    +    + G   + F I+  +G I++   L    T T  L V ATD G+
Sbjct: 2164 FAADGDEGTNGQVRYGIVDGNANQEFRIDSVTGAITVAKPLDREKTPTYSLTVQATDRGS 2223

Query: 224  PPR 226
             PR
Sbjct: 2224 TPR 2226



 Score = 58.2 bits (139), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 47/157 (29%), Positives = 82/157 (52%), Gaps = 13/157 (8%)

Query: 88   RFSI-SRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFR 143
            +F+I S  G ++L+  LDYE   +Y   + A D+    + ++ T+NI +++ ND  P F 
Sbjct: 1244 QFAIDSTSGQVTLIGRLDYEATPAYSLVIQAVDSGAVSLNSTCTLNIDILDENDNTPSF- 1302

Query: 144  YPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTL--SLRGPY-EKMFSIN-DSGHI 199
             P+  LF+    L ++  G ++  V A D D GD   L  S+ G      FSI+ ++G I
Sbjct: 1303 -PKSTLFVD--VLENMRIGELVSSVTATDSDSGDNADLHYSITGTNNHGTFSISPNTGSI 1359

Query: 200  SIVDLSALNTSTI-QLVVVATDTGNPPRQASVPAIMH 235
             +       T ++ +L + A D G PPR +++  ++H
Sbjct: 1360 FLAKKLDFETQSLYKLNITAKDQGRPPRSSTMSVVIH 1396



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 58/198 (29%), Positives = 89/198 (44%), Gaps = 24/198 (12%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLS-NDYGERFSISRQGDISLM 100
            F +  Y V+  E+ PVN     V     +   +  + Y ++  + G+ F I   G + + 
Sbjct: 983  FDQLSYEVTLSESEPVNSRFFKVQAFDKDSGANGEIAYSIAEGNTGDAFGIFPDGQLYIK 1042

Query: 101  QCLDYETEDSYRFTVYATDTLMTT-SATVNISVV--NVNDWDPRFRYPQYELFLPHIPLA 157
              LD E +D Y   V A+D  +   SATVN++V+  +VND  P F    Y  +       
Sbjct: 1043 SELDRELQDRYVLLVVASDRAVEPLSATVNVTVILEDVNDNRPLFNSTNYTFYFEE---- 1098

Query: 158  DLTPGSVIGKVEAADGDKGD----RVTLSLRGPYEKMFSINDSGHIS---IVDLSAL--- 207
            +  PGS +GKV A D D G     R +  +  P  ++ +I  SG I+     D  +L   
Sbjct: 1099 EQRPGSFVGKVSAIDKDFGPNGEVRYSFEMVQPDFELHAI--SGEITNTHQFDRESLMRR 1156

Query: 208  -NTSTIQLVVVATDTGNP 224
              T+     V+ATD G P
Sbjct: 1157 RGTAVFSFTVIATDQGLP 1174



 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 34/101 (33%), Positives = 49/101 (48%), Gaps = 5/101 (4%)

Query: 77   VKYWLSNDYGERFSIS-RQGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNV 135
            V Y + +   + F I    GD+   + LD E    Y   V A D L ++   +NI+V +V
Sbjct: 1762 VTYTIISGADDSFRIDPESGDLIATKRLDRERRSKYSLLVRADDGLQSSDMRINITVSDV 1821

Query: 136  NDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG 176
            ND  P+F  P Y   +P     D TPGS++  + A D D G
Sbjct: 1822 NDHTPKFSRPVYSFDIPE----DTTPGSLVAAILATDDDSG 1858



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 59/190 (31%), Positives = 94/190 (49%), Gaps = 15/190 (7%)

Query: 56   ENLPVNYVLLTVTTNKPRDLRVKYWL-SNDYGERFSISR-QGDISLMQCLDYETEDSYRF 113
            EN PV  ++ TVT +  R   + Y++ S + G    I +  G +S+ Q LD+E    Y  
Sbjct: 2565 ENQPVGTLVTTVTGSSLRGEPLSYYIASGNLGNTLQIDQLTGQVSISQPLDFEKIQKYVV 2624

Query: 114  TVYATDTLM---TTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEA 170
             + A D      ++   ++I+V++VND  P F+    + F+  I L +L+P  ++  V A
Sbjct: 2625 WIEARDGGFPPFSSYEKLDITVLDVNDNPPVFKE---DPFISEI-LENLSPRKIL-TVSA 2679

Query: 171  ADGDKGDRVTLS---LRGPYEKMFSINDS-GHI-SIVDLSALNTSTIQLVVVATDTGNPP 225
             D D G    L    + G  E  FSIN + G I SI  L     S   L+V ++D G+P 
Sbjct: 2680 VDKDSGPNGQLDYEIINGNKEHSFSINHATGEIRSIRPLDREKISQYVLIVKSSDRGSPS 2739

Query: 226  RQASVPAIMH 235
            +  SV  I++
Sbjct: 2740 QSTSVKVIIN 2749



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 49/187 (26%), Positives = 96/187 (51%), Gaps = 12/187 (6%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRDLR--VKYWLS-NDYGERFSISR-QGDISLM 100
           FS+  YS    EN+ + Y + +V+ +   DL   + Y ++  D    F+I++  G ++  
Sbjct: 780 FSQAAYSFVVFENVALGYHVGSVSAST-MDLNSNISYLITTGDQKGMFAINQVTGQLTTA 838

Query: 101 QCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLT 160
             +D E +  Y+  V A+   +T  + VNI+V ++ND  P F      + +    + +  
Sbjct: 839 SVIDREEQSFYQLKVVASGGTVTGDSMVNITVKDLNDNSPHFLQAVESVNV----VENWQ 894

Query: 161 PGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIND-SGHISIVDLSALNTSTIQLVVV 217
            G  I + +A D D+G    V  SL+   + +F+IN+ +G+IS++    ++  + Q+ ++
Sbjct: 895 AGHSIFQAKAVDPDEGVNGMVVYSLKQNPKNLFTINEKNGNISLLGPLDVHAGSYQIEIL 954

Query: 218 ATDTGNP 224
           A+D G P
Sbjct: 955 ASDMGVP 961



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 49/149 (32%), Positives = 72/149 (48%), Gaps = 12/149 (8%)

Query: 95   GDISLMQCLDYETEDSYRFTVYATDTL----MTTSATVNISVVNVNDWDPRFRYPQYELF 150
            G I     LD ET+++Y   V A+D      +++S +V ++V +VND  PRF   Q+  +
Sbjct: 2402 GQIITSALLDRETKENYTLVVVASDAGSPEPLSSSTSVLVTVTDVNDNPPRF---QHHPY 2458

Query: 151  LPHIPLADLTPGSVIGKVEAADGDKGDRVTL--SLRGPYEKMFSINDSGHISIVDLSALN 208
            + HIP   L PGS +  V   D D G    L  SL G   + F I D+   +I+    LN
Sbjct: 2459 VTHIPSPTL-PGSFVFAVTVTDADIGPNSELHYSLSGRNSEKFHI-DTLRGAIMAARPLN 2516

Query: 209  -TSTIQLVVVATDTGNPPRQASVPAIMHF 236
             TS +   V   D G+ P+  S    + F
Sbjct: 2517 GTSEVTFSVHVKDGGSVPKTDSTTVTVRF 2545



 Score = 51.6 bits (122), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 61/224 (27%), Positives = 98/224 (43%), Gaps = 37/224 (16%)

Query: 45   FSKNEYSVSALENLPV--NYVLLTVTTN--KPRDLRVKYWL-SNDYGERFSISRQGDISL 99
            F  + YSV+  ENL      VL  V  +  +  + ++ Y L   +    F++S  G++ +
Sbjct: 2246 FELSPYSVNVPENLGTLPRTVLQVVARDDDQGSNSKLSYVLFGGNEDNAFTLSASGELQV 2305

Query: 100  MQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
             Q LD ET++ +   + ATD+    +T + T+N+ V ++ND  P F    Y   +P    
Sbjct: 2306 TQSLDRETKEHFVLLITATDSGFPALTGTGTINVIVDDINDNVPTFASKMYFTTIPE--- 2362

Query: 157  ADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSGHISIVDLSALNTSTIQ--- 213
             D   G+ +  V A+D D      + + G     F+IN S    I+  + L+  T +   
Sbjct: 2363 -DAPTGTDVILVNASDIDASTNAVIRIIGG-NSQFTINPSTG-QIITSALLDRETKENYT 2419

Query: 214  LVVVATDTG--------------------NPPRQASVPAIMHFP 237
            LVVVA+D G                    NPPR    P + H P
Sbjct: 2420 LVVVASDAGSPEPLSSSTSVLVTVTDVNDNPPRFQHHPYVTHIP 2463



 Score = 47.8 bits (112), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 71/237 (29%), Positives = 104/237 (43%), Gaps = 22/237 (9%)

Query: 11  ITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNE-YSVSALENLPVNYVLLTVTT 69
           I L + A       + + A L+V+    +  +  FS+ E Y+VS +EN P    LL +  
Sbjct: 535 IVLNISARDQGVHPKVSYAQLVVTLLDVNDEKPVFSQPEGYNVSVVENAPTGTELLVLGA 594

Query: 70  NKPRDL----RVKYWLSNDYGERFSISR---QGDISLMQCLDYETEDSYRFTVYATD--- 119
               DL     V++ L     ++ S       G +S +  LD E +  Y   V ATD   
Sbjct: 595 TD-GDLGDNGTVRFSLQEAETDQRSFRLDPVSGRLSTISSLDREEQAFYSLLVLATDLGS 653

Query: 120 TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRV 179
              ++   +N+S++++ND  P F   QY     HI   +   GS I  V A D D G   
Sbjct: 654 PPQSSMVRINVSLLDINDNSPVFYPVQY---FAHI-QENEPGGSYITTVSATDPDLGLNG 709

Query: 180 TL--SLRGPYEKMFSIN-DSGHISI-VDLSALNTSTIQLVVVATDTGN--PPRQASV 230
           T+  S+       F +N  SG IS  + L     +  QL +VATD GN   P QA V
Sbjct: 710 TIKYSISAGDRSRFQVNAQSGVISTRMALDREEKTAYQLQIVATDGGNLQSPNQAIV 766



 Score = 46.6 bits (109), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 47/172 (27%), Positives = 79/172 (45%), Gaps = 17/172 (9%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGERFSIS-RQGDISLM 100
            F  +EY  + LEN P    ++ +     +   +  + Y + +   + F I    G ++  
Sbjct: 3181 FLPDEYFPTVLENAPSGTTVIHLNATDADSGTNAVIAYTIQSSDSDLFVIDPNTGVVTTQ 3240

Query: 101  QCLDYETEDSYRFTVYA---TDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLA 157
              LD+ET+ SY  TV A    D    + ATVNI +   N++ PRF    Y     +  ++
Sbjct: 3241 GFLDFETKQSYHLTVKAFNVPDEERCSFATVNIQLKGTNEYVPRFVSKLY-----YFEIS 3295

Query: 158  DLTP-GSVIGKVEAAD---GDKGDRVTLSLRGPYEKMFSIN-DSGHISIVDL 204
            +  P G+++G+V A+D   G  G+   L      +K F IN  +G I +  L
Sbjct: 3296 EAAPKGTIVGEVFASDRDLGSDGEVHYLIFGNSRKKGFQINKKTGQIYVSGL 3347



 Score = 43.1 bits (100), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 42/142 (29%), Positives = 71/142 (50%), Gaps = 14/142 (9%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLR----VKYWLSNDYGER-FSI-SRQGDI 97
            +FS++  S +  E+  V  ++ TV+  + RD      ++Y +S+   E  F+I S  G +
Sbjct: 3075 EFSQSHMSATIPESHSVGAIVRTVSA-RDRDTAMNGLIRYSISSGNEEGIFAINSSTGVL 3133

Query: 98   SLMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHI 154
            +L + LDYE    +  TV ATD      T   +V ++V++VND  P F   +Y    P +
Sbjct: 3134 TLAKALDYELCQKHEMTVSATDGGWVSRTGYCSVTVNVIDVNDNSPVFLPDEY---FPTV 3190

Query: 155  PLADLTPGSVIGKVEAADGDKG 176
             L +   G+ +  + A D D G
Sbjct: 3191 -LENAPSGTTVIHLNATDADSG 3211



 Score = 40.0 bits (92), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 55/108 (50%), Gaps = 7/108 (6%)

Query: 89   FSISRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYP 145
            FS++  G +S  + +D E    +  +V   D+    M+++ TV+I+V++ ND   + R  
Sbjct: 3545 FSLNTAGVLSTTREIDREQISDFYLSVVTRDSGVPQMSSTGTVHITVIDQNDNPSQSR-- 3602

Query: 146  QYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSI 193
              E+F+ +    +L PG V+G V+  D D  D    SL      +FSI
Sbjct: 3603 TVEIFVNY--YGNLFPGGVLGSVKPQDPDVLDTFHCSLTSGVTSLFSI 3648


>gi|149017350|gb|EDL76401.1| rCG49295, isoform CRA_ak [Rattus norvegicus]
          Length = 823

 Score = 68.9 bits (167), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 65/230 (28%), Positives = 102/230 (44%), Gaps = 22/230 (9%)

Query: 13  LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKP 72
           LV+ A+   N  R   A L VS    +     F ++ Y +S LE+ P   VL+ +  + P
Sbjct: 95  LVLTAVDGGNPPRSGTAELRVSVLDVNDNAPAFQQSSYRISVLESAPAGMVLIQLNASDP 154

Query: 73  RDL----RVKYWLSNDYGER----FSI-SRQGDISLMQCLDYETEDSYRFTVYATD---T 120
            DL     V +  S    +R    FS+    G ++L   LD+E+E+ Y F V A D    
Sbjct: 155 -DLGPSGNVTFSFSGHTPDRVRNLFSLHPTTGKLTLQGPLDFESENYYEFDVRARDGGSP 213

Query: 121 LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVT 180
            M    ++ + +++VND  P          LP        PG+V+  +   D D G    
Sbjct: 214 AMEQHCSLRVDLLDVNDNAPHITVTSELGTLPE----SAEPGTVVALISVQDPDSGSNGD 269

Query: 181 LSLRGPYEKMFSINDS--GHISIVDLSALN---TSTIQLVVVATDTGNPP 225
           +SLR P    F++  +     S+V    L+    S+  ++V A+D GNPP
Sbjct: 270 VSLRIPDHLPFALKSAFRNQFSLVTAGPLDREARSSYDIMVTASDAGNPP 319



 Score = 44.7 bits (104), Expect = 0.076,   Method: Compositional matrix adjust.
 Identities = 44/169 (26%), Positives = 77/169 (45%), Gaps = 27/169 (15%)

Query: 77  VKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVV 133
           + + L + +  +FS+   G       LD E   SY   V A+D     ++T  T+ +++ 
Sbjct: 278 LPFALKSAFRNQFSLVTAGP------LDREARSSYDIMVTASDAGNPPLSTHRTIFLNIS 331

Query: 134 NVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMF 191
           +VND  P F    +E+F+P     +  PG ++  + A+D D G    ++ SL  P  +  
Sbjct: 332 DVNDNPPSFFQRSHEVFVPE----NNRPGDLLCSLAASDPDSGLNALISYSLLEPRNR-- 385

Query: 192 SINDSGHISIVDLSAL----------NTSTIQLVVVATDTGNPPRQASV 230
            ++ S  IS+   +             T T+Q  V A D G+PP  ++V
Sbjct: 386 DVSASSFISLNPQTGAVHATRSFDYEQTQTLQFEVQARDRGSPPLSSTV 434



 Score = 43.5 bits (101), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 49/190 (25%), Positives = 83/190 (43%), Gaps = 15/190 (7%)

Query: 95  GDISLMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYEL-- 149
           G +   +  DYE   + +F V A D     ++++ TV + V+++ND  P    P+     
Sbjct: 400 GAVHATRSFDYEQTQTLQFEVQARDRGSPPLSSTVTVRLFVLDLNDNAPAVLRPRARPGS 459

Query: 150 FLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIND-SGHISIVDLS 205
             P      +  G ++ KV A D D G    +S   L  P   +F+++  +G +      
Sbjct: 460 LCPQALPPSVGAGHLVTKVTAVDLDSGYNAWVSYQLLEAPDPSLFAVSRYAGEVRTAVPI 519

Query: 206 ALNTSTIQLVVVATDTGNPPRQASVPAIMHFPE---AIVQ--QASSKLNSGTSSTVLIIL 260
             +    +LV+V  D+G+PP   SV  ++   E    +V   + SS    G S   L  L
Sbjct: 520 PADLPPQKLVIVVKDSGSPPLSTSVTLLVSLEEDTHPVVPDLRESSAPREGESRLTL-YL 578

Query: 261 GVVLIVLGFV 270
            V L+ + FV
Sbjct: 579 AVSLVAICFV 588


>gi|440902766|gb|ELR53515.1| Protocadherin Fat 4 [Bos grunniens mutus]
          Length = 4963

 Score = 68.6 bits (166), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 74/270 (27%), Positives = 122/270 (45%), Gaps = 44/270 (16%)

Query: 2    INEDD-----FLQPITLV---VRAIQYDNQDRYALATLIVSKAGTSLRELQ--------- 44
            +NEDD     FL P+T V    R + Y+ Q  Y L T+     G     ++         
Sbjct: 1861 VNEDDEDGIFFLNPVTGVFNLTRMLDYEAQQYYIL-TVRAEDGGGQFTTIRVYFNILDVN 1919

Query: 45   -----FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWL-SNDYGERFSISRQG 95
                 FS N YS S +ENLP+   +L        D    ++ Y + S D   +F++ + G
Sbjct: 1920 DNPPIFSLNSYSTSLMENLPLGSTVLVFNVTDADDGINSQLAYSIASGDSLGQFTVDKNG 1979

Query: 96   DISLMQCLDYETEDSYRFTVYATD------TLMTTSATVNISVVNVNDWDPRFRYPQYEL 149
             + +++ LD E++  Y   V   D      +  T++A ++I +++VND  P F  P+   
Sbjct: 1980 VLKVLKPLDRESQSFYNLVVQVHDLPQLPASRFTSTAQISIILLDVNDNPPTFLSPK--- 2036

Query: 150  FLPHIPLADLTP-GSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIND-SGHISIV-DL 204
             L +IP  + TP  +++ K +A D D G    +  +L  P    F+I    G + +  +L
Sbjct: 2037 -LTYIP--ENTPIDTIVFKAQATDPDSGPNSYIEYTLLNPSGNKFTIGTIDGEVRLTGEL 2093

Query: 205  SALNTSTIQLVVVATDTGNPPRQASVPAIM 234
                 S   L VVATD G+P   +S   ++
Sbjct: 2094 DREEVSNYTLTVVATDKGHPSLSSSTEVVV 2123



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 63/192 (32%), Positives = 92/192 (47%), Gaps = 24/192 (12%)

Query: 50   YSVSALENLPVNYVLLTVTTNKPRDLRV----KYWLSNDYGERFSIS-RQGDISLMQCLD 104
            +S    EN P+ Y +  VTT+   D+ V    +Y +  D    F+I+   GDI + + L+
Sbjct: 2760 FSAHVPENSPLGYTVTRVTTSD-EDIGVNAISRYSIM-DTSLPFTINPSTGDIVISRPLN 2817

Query: 105  YETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSV 164
             E  D YR  V A D+  T S  V I V +VND  PRF  P Y L  P   L ++  GS 
Sbjct: 2818 REDTDRYRIRVSAHDSGWTVSTDVTIFVTDVNDNAPRFSRPSYYLDCPE--LTEI--GSK 2873

Query: 165  IGKVEAADGDKGD--RVTLSLRGPYEKMFSINDS-GHI---------SIVDLSALNTSTI 212
            + +V A D D+G   +V   ++   E  F IN S G I         ++   S +N +  
Sbjct: 2874 VTQVSATDPDEGSNGQVFYFIKSQSE-YFRINASTGEIFNKQVLKYQNVSGFSNVNINRH 2932

Query: 213  QLVVVATDTGNP 224
              +V ++D GNP
Sbjct: 2933 SFIVTSSDRGNP 2944



 Score = 58.9 bits (141), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 55/183 (30%), Positives = 89/183 (48%), Gaps = 16/183 (8%)

Query: 56   ENLPVNYVLLTVTTNKPR---DLRVKYWLSNDYGERFSISR-QGDISLMQCLDYETEDSY 111
            EN P++ ++       P    +  ++Y L N  G +F+I    G++ L   LD E   +Y
Sbjct: 2042 ENTPIDTIVFKAQATDPDSGPNSYIEYTLLNPSGNKFTIGTIDGEVRLTGELDREEVSNY 2101

Query: 112  RFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKV 168
              TV ATD     +++S  V + V+++ND +P F    Y++ +    L     G+ I +V
Sbjct: 2102 TLTVVATDKGHPSLSSSTEVVVMVLDINDNNPVFAQAMYKVEINENTLT----GTDITQV 2157

Query: 169  EAADGDKGDRVTLS---LRGPYEKMFSIND-SGHISIVD-LSALNTSTIQLVVVATDTGN 223
             AADGD+G    +    + G   + F I+  +G I++   L    T T  L V ATD G+
Sbjct: 2158 FAADGDEGTNGQVRYGIVDGNANQEFRIDSVTGAITVAKPLDREKTPTYSLTVQATDRGS 2217

Query: 224  PPR 226
             PR
Sbjct: 2218 TPR 2220



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 58/198 (29%), Positives = 89/198 (44%), Gaps = 24/198 (12%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLS-NDYGERFSISRQGDISLM 100
            F +  Y V+  E+ PVN     V     +   +  + Y ++  + G+ F I   G + + 
Sbjct: 978  FDQLSYEVTLSESEPVNSRFFKVQAFDKDSGANGEIAYSIAEGNTGDAFGIFPDGQLYIK 1037

Query: 101  QCLDYETEDSYRFTVYATDTLMTT-SATVNISVV--NVNDWDPRFRYPQYELFLPHIPLA 157
              LD E +D Y   V A+D  +   SATVN++V+  +VND  P F    Y  +       
Sbjct: 1038 SELDRELQDRYVLLVVASDRAVEPLSATVNVTVILEDVNDNRPLFNSTNYTFYFEE---- 1093

Query: 158  DLTPGSVIGKVEAADGDKGD----RVTLSLRGPYEKMFSINDSGHIS---IVDLSAL--- 207
            +  PGS +GKV A D D G     R +  +  P  ++ +I  SG I+     D  +L   
Sbjct: 1094 EQRPGSFVGKVSAIDKDFGPNGEVRYSFEMVQPDFELHAI--SGEITNTHQFDRESLMRR 1151

Query: 208  -NTSTIQLVVVATDTGNP 224
              T+     V+ATD G P
Sbjct: 1152 RGTAVFSFTVIATDQGLP 1169



 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 34/101 (33%), Positives = 49/101 (48%), Gaps = 5/101 (4%)

Query: 77   VKYWLSNDYGERFSIS-RQGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNV 135
            V Y + +   + F I    GD+   + LD E    Y   V A D L ++   +NI+V +V
Sbjct: 1756 VTYTIISGADDSFRIDPESGDLIATKRLDRERRSKYSLLVRADDGLQSSDMRINITVSDV 1815

Query: 136  NDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG 176
            ND  P+F  P Y   +P     D TPGS++  + A D D G
Sbjct: 1816 NDHTPKFSRPVYSFDIPE----DTTPGSLVAAILATDDDSG 1852



 Score = 55.5 bits (132), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 50/149 (33%), Positives = 73/149 (48%), Gaps = 12/149 (8%)

Query: 95   GDISLMQCLDYETEDSYRFTVYATDTL----MTTSATVNISVVNVNDWDPRFRYPQYELF 150
            G I     LD ET+++Y   V A+D      +++S +V ++V +VND  PRF   Q+  +
Sbjct: 2398 GQIITSALLDRETKENYTLVVVASDAGSPEPLSSSTSVLVTVTDVNDNPPRF---QHHPY 2454

Query: 151  LPHIPLADLTPGSVIGKVEAADGDKGDRVTL--SLRGPYEKMFSINDSGHISIVDLSALN 208
            + HIP +   PGS I  V   D D G    L  SL G   + F I D+   +I+   ALN
Sbjct: 2455 VTHIP-SPTPPGSFIFAVTVTDADIGPNSELHYSLSGRNSEKFHI-DTLRGAIMAAGALN 2512

Query: 209  -TSTIQLVVVATDTGNPPRQASVPAIMHF 236
             TS +   V   D G+ P+  S    + F
Sbjct: 2513 GTSEVTFSVYVKDGGSVPKTDSTTVTVRF 2541



 Score = 55.5 bits (132), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 59/190 (31%), Positives = 94/190 (49%), Gaps = 15/190 (7%)

Query: 56   ENLPVNYVLLTVTTNKPRDLRVKYWL-SNDYGERFSISR-QGDISLMQCLDYETEDSYRF 113
            EN PV  ++ TVT +  R   + Y++ S + G    I +  G +S+ Q LD+E    Y  
Sbjct: 2561 ENQPVGTLVTTVTGSSLRGEPLSYYIASGNLGNTLQIDQLTGQVSISQPLDFEKIQKYVV 2620

Query: 114  TVYATDTLM---TTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEA 170
             + A D      ++   ++I+V++VND  P F+    + F+  I L +L+P  ++  V A
Sbjct: 2621 WIEARDGGFPPFSSYEKLDITVLDVNDNPPVFKE---DPFVSEI-LENLSPRKIL-TVSA 2675

Query: 171  ADGDKGDRVTLS---LRGPYEKMFSINDS-GHI-SIVDLSALNTSTIQLVVVATDTGNPP 225
             D D G    L    + G  E  FSIN + G I SI  L     S   L+V ++D G+P 
Sbjct: 2676 VDKDSGPNGQLDYEIINGNKEHSFSINHATGEIRSIRPLDREKISQYVLIVKSSDRGSPS 2735

Query: 226  RQASVPAIMH 235
            +  SV  I++
Sbjct: 2736 QSTSVKVIIN 2745



 Score = 55.1 bits (131), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 46/157 (29%), Positives = 81/157 (51%), Gaps = 14/157 (8%)

Query: 88   RFSI-SRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFR 143
            +F+I S  G ++L+  LDYE   +Y   + A D+    + ++ T+NI +++ ND  P F+
Sbjct: 1239 QFAIDSTSGQVTLIGRLDYEATPAYSLVIQAVDSGAVSLNSTCTLNIDILDENDNTPSFK 1298

Query: 144  YPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTL--SLRGPY-EKMFSIN-DSGHI 199
                 LF+    L ++  G ++  V A D D GD   L  S+ G      FSI+ ++G I
Sbjct: 1299 S---TLFVD--VLENMRIGELVSSVTATDSDSGDNADLHYSITGTNNHGTFSISPNTGSI 1353

Query: 200  SIVDLSALNTSTI-QLVVVATDTGNPPRQASVPAIMH 235
             +       T ++ +L + A D G PPR +++  ++H
Sbjct: 1354 FLAKKLDFETQSLYKLNITAKDQGRPPRSSTMSVVIH 1390



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 49/187 (26%), Positives = 96/187 (51%), Gaps = 12/187 (6%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRDLR--VKYWLS-NDYGERFSISR-QGDISLM 100
           FS+  YS    EN+ + Y + +V+ +   DL   + Y ++  D    F+I++  G ++  
Sbjct: 775 FSQAAYSFVVFENVALGYHVGSVSAST-MDLNSNISYLITTGDQKGMFAINQVTGQLTTA 833

Query: 101 QCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLT 160
             +D E +  Y+  V A+   +T  + VNI+V ++ND  P F      + +    + +  
Sbjct: 834 SVIDREEQSFYQLKVVASGGTVTGDSMVNITVKDLNDNSPHFLQAVESVNV----VENWQ 889

Query: 161 PGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIND-SGHISIVDLSALNTSTIQLVVV 217
            G  I + +A D D+G    V  SL+   + +F+IN+ +G+IS++    ++  + Q+ ++
Sbjct: 890 AGHSIFQAKAVDPDEGVNGMVLYSLKQNPKNLFTINERNGNISLLGPLDVHAGSYQIEIL 949

Query: 218 ATDTGNP 224
           A+D G P
Sbjct: 950 ASDMGVP 956



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 63/227 (27%), Positives = 99/227 (43%), Gaps = 41/227 (18%)

Query: 45   FSKNEYSVSALENLPV--NYVLLTVTTNKPR--DLRVKYWL-SNDYGERFSISRQGDISL 99
            F  + YSV+  ENL      VL  V  +  +  + ++ Y L   +    F++S  G++ +
Sbjct: 2240 FELSPYSVNVPENLGTLPRTVLQVVARDDDQGSNSKLSYVLFGGNEDNAFTLSASGELRV 2299

Query: 100  MQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
             Q LD ET++ +   + ATD+    +T + T+N+ V ++ND  P F    Y   +P    
Sbjct: 2300 TQSLDRETKEHFVLLITATDSGFPALTGTGTINVIVDDINDNVPTFASKMYFTTIPE--- 2356

Query: 157  ADLTPGSVIGKVEAADGDKGDRVTLSLR---GPYEKMFSINDSGHISIVDLSALNTSTIQ 213
             D   G+ +  V A+D D      +S R   G     F+IN S    I+  + L+  T +
Sbjct: 2357 -DAPTGTDVILVNASDIDASTNAVISYRIIGG--NSQFTINPSTG-QIITSALLDRETKE 2412

Query: 214  ---LVVVATDTG--------------------NPPRQASVPAIMHFP 237
               LVVVA+D G                    NPPR    P + H P
Sbjct: 2413 NYTLVVVASDAGSPEPLSSSTSVLVTVTDVNDNPPRFQHHPYVTHIP 2459



 Score = 47.4 bits (111), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 71/237 (29%), Positives = 104/237 (43%), Gaps = 22/237 (9%)

Query: 11  ITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNE-YSVSALENLPVNYVLLTVTT 69
           I L + A       + + A L+V+    +  +  FS+ E Y+VS +EN P    LL +  
Sbjct: 530 IVLNISARDQGVHPKVSYAQLVVTLLDVNDEKPVFSQPEGYNVSVVENAPTGTELLVLGA 589

Query: 70  NKPRDL----RVKYWLSNDYGERFSISR---QGDISLMQCLDYETEDSYRFTVYATD--- 119
               DL     V++ L     ++ S       G +S +  LD E +  Y   V ATD   
Sbjct: 590 TD-GDLGDNGTVRFSLQEAETDQRSFRLDPVSGRLSTISSLDREEQAFYSLLVLATDLGS 648

Query: 120 TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRV 179
              ++   +N+S++++ND  P F   QY     HI   +   GS I  V A D D G   
Sbjct: 649 PPQSSMVRINVSLLDINDNSPVFYPVQY---FAHI-QENEPGGSYITTVSATDPDLGLNG 704

Query: 180 TL--SLRGPYEKMFSIN-DSGHISI-VDLSALNTSTIQLVVVATDTGN--PPRQASV 230
           T+  S+       F +N  SG IS  + L     +  QL +VATD GN   P QA V
Sbjct: 705 TIKYSISAGDRSRFQVNAQSGVISTRMALDREEKTAYQLQIVATDGGNLQSPNQAIV 761



 Score = 46.6 bits (109), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 47/172 (27%), Positives = 79/172 (45%), Gaps = 17/172 (9%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGERFSIS-RQGDISLM 100
            F  +EY  + LEN P    ++ +     +   +  + Y + +   + F I    G ++  
Sbjct: 3177 FLPDEYFPTVLENAPSGTTVIHLNATDADSGTNAVIAYTIQSSDSDLFVIDPNTGVVTTQ 3236

Query: 101  QCLDYETEDSYRFTVYA---TDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLA 157
              LD+ET+ SY  TV A    D    + ATVNI +   N++ PRF    Y     +  ++
Sbjct: 3237 GFLDFETKQSYHLTVKAFNVPDEERCSFATVNIQLKGTNEYVPRFVSKLY-----YFEIS 3291

Query: 158  DLTP-GSVIGKVEAAD---GDKGDRVTLSLRGPYEKMFSIN-DSGHISIVDL 204
            +  P G+++G+V A+D   G  G+   L      +K F IN  +G I +  L
Sbjct: 3292 EAAPTGTIVGEVFASDRDLGSDGEVHYLIFGNSRKKGFQINKKTGQIYVSGL 3343



 Score = 43.1 bits (100), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 42/142 (29%), Positives = 71/142 (50%), Gaps = 14/142 (9%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLR----VKYWLSNDYGER-FSI-SRQGDI 97
            +FS++  S +  E+  V  ++ TV+  + RD      ++Y +S+   E  F+I S  G +
Sbjct: 3071 EFSQSHMSATIPESHSVGAIVRTVSA-RDRDTAMNGLIRYSISSGNEEGIFAINSSTGVL 3129

Query: 98   SLMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHI 154
            +L + LDYE    +  TV ATD      T   +V ++V++VND  P F   +Y    P +
Sbjct: 3130 TLAKALDYELCQKHEMTVSATDGGWVSRTGYCSVTVNVIDVNDNSPVFLPDEY---FPTV 3186

Query: 155  PLADLTPGSVIGKVEAADGDKG 176
             L +   G+ +  + A D D G
Sbjct: 3187 -LENAPSGTTVIHLNATDADSG 3207



 Score = 40.0 bits (92), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 55/108 (50%), Gaps = 7/108 (6%)

Query: 89   FSISRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYP 145
            FS++  G +S  + +D E    +  +V   D+    M+++ TV+I+V++ ND   + R  
Sbjct: 3541 FSLNTAGVLSTTREIDREQISDFYLSVVTRDSGVPQMSSTGTVHITVIDQNDNPSQSR-- 3598

Query: 146  QYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSI 193
              E+F+ +    +L PG V+G V+  D D  D    SL      +FSI
Sbjct: 3599 TVEIFVNY--YGNLFPGGVLGSVKPQDPDVLDTFHCSLTSGVTSLFSI 3644


>gi|350402296|ref|XP_003486436.1| PREDICTED: cadherin-87A-like [Bombus impatiens]
          Length = 1897

 Score = 68.6 bits (166), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 75/243 (30%), Positives = 108/243 (44%), Gaps = 46/243 (18%)

Query: 11  ITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTN 70
           I LVV    + N    + AT+ VS    +     FS   Y+   LE  P    ++T+T  
Sbjct: 471 IILVVAEEVHTNPKLSSTATVTVSITDANDNSPTFSNPTYTAVVLETAPPGTTVITITA- 529

Query: 71  KPRD------LRVKYWLSNDYGERFSISRQ-GDISLMQC--------LDYETEDSYRFTV 115
           K RD        + Y L     + FS+ R+ G I++ QC        LDYE +  Y  T 
Sbjct: 530 KDRDSGRFGTAGIAYQLLGQGAQHFSVDRKTGVITVAQCPTPGVSPCLDYEEQTEYFLTY 589

Query: 116 YATDT---LMTTSATVNISVVNVNDWDPRFRYPQY--------ELFLPHIPLADLTPGSV 164
            ATD      TTS ++ IS+ + ND  PRF   +Y        E F P +          
Sbjct: 590 KATDNDGQGQTTSVSLRISLSDANDSPPRFLQDKYRAVIDEGAEKFEPDL---------- 639

Query: 165 IGKVEAADGDKGDRVTLSLRGPYE-KMFSIN-DSGHISI-----VDLSALNTSTIQLVVV 217
             KV+A D DK  ++T ++ G  E  +F+I+ D+G I+I     VDL+      I LV+ 
Sbjct: 640 --KVQARDKDKTSKITYAIVGGDELGLFAIDPDTGEITIRNKGPVDLTNSTHDWIALVIQ 697

Query: 218 ATD 220
           A D
Sbjct: 698 AND 700



 Score = 61.6 bits (148), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 48/153 (31%), Positives = 83/153 (54%), Gaps = 15/153 (9%)

Query: 95   GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFL 151
            G +   Q +DYE      FTV A D+    ++T+A V ++V+NVND DP+F   + EL+ 
Sbjct: 1004 GIVRTSQVIDYEETKQLEFTVVAYDSGVPQLSTTAKVIVTVINVNDQDPKF---EKELYN 1060

Query: 152  PHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSI-NDSGHISIVDLSALN 208
              +   +  PG+ +  V+A DGD+G    ++ SL G +   F+I +++G I++   + L+
Sbjct: 1061 ASVK-ENSPPGTHVTTVKATDGDEGPFGEISYSLIGDHAADFNIGHETGEITVGGATVLD 1119

Query: 209  ---TSTIQLVVVATDTG--NPPRQASVPAIMHF 236
               T  I + V+A+D    N  R  +VP ++  
Sbjct: 1120 REMTPNITITVMASDGAHINSRRSTTVPVLVKL 1152



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 58/199 (29%), Positives = 90/199 (45%), Gaps = 19/199 (9%)

Query: 45   FSKNEYSVSALENLPVNY---VLLTVTTNKPRDLRVKYWLSNDYG---ERFSISRQGDIS 98
            F+++ Y  S  ENLPVN    +L  +  +    +  + W +  +G   E FS++R+  I 
Sbjct: 1162 FTQHSYRASVAENLPVNPPAPILQVIAMDHDEGINGEVWYTIIHGNENESFSLNRETGIL 1221

Query: 99   LMQCLDYETEDSYRFTVYATDTL----MTTSATVNISVVNVNDWDPRFRYPQYELFLPHI 154
                       SYR  V A D       + + TV+I V +VN   P+F  P+       +
Sbjct: 1222 YPGAALLGRAGSYRIEVEARDGAGSGPHSDNCTVDIRVTSVNQHKPQFVLPELTNATVEV 1281

Query: 155  PLADLTPGSVIGKVEAADGDKGD--RVTLSL----RGPYE-KMFSIN-DSGHI-SIVDLS 205
            P        +I  V+A D D G+  RV+  L    R   E + FSI+ ++G + S + L 
Sbjct: 1282 PENTGVLNYLILTVKAIDRDPGENGRVSYHLKVGNRNTQETEEFSIDQETGELRSKIILD 1341

Query: 206  ALNTSTIQLVVVATDTGNP 224
                S  +LV+VA D G P
Sbjct: 1342 REVKSKFELVLVAADHGTP 1360



 Score = 47.4 bits (111), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 46/152 (30%), Positives = 74/152 (48%), Gaps = 17/152 (11%)

Query: 79  YWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDW 138
           + +  D GE  +I  +G + L       T D     + A D +   SATVNI++ +VN+ 
Sbjct: 665 FAIDPDTGE-ITIRNKGPVDLTNS----THDWIALVIQANDGIYVDSATVNITIRDVNNN 719

Query: 139 DPRFRYPQYELFLPHIPLADLTP-GSVIGKVEAADGDKGDRVTLSLR---GPYEKMFSIN 194
            P F     EL+   IP  +++P G+V+ +V A D D G    L  R   G ++  F++N
Sbjct: 720 APVF---TQELYTASIP--EISPIGTVVEEVTATDADTGINAELVYRIQKGAFDD-FTMN 773

Query: 195 DSGHISIV--DLSALNTSTIQLVVVATDTGNP 224
           ++  +  V   L   N +T  + V+A D G P
Sbjct: 774 ETTGVVTVFRKLDYDNKNTYHVEVIAFDKGTP 805


>gi|118092647|ref|XP_421595.2| PREDICTED: cadherin-23 [Gallus gallus]
          Length = 3365

 Score = 68.6 bits (166), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 61/195 (31%), Positives = 92/195 (47%), Gaps = 20/195 (10%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDLR---VKYWLSNDYGERFSIS-RQGDISLM 100
            FS+  Y  +  E++P+  V+L V        R   ++Y L +  G +F I+   GDI ++
Sbjct: 2408 FSQPSYQKAVFEDVPLGTVILRVKATDADSGRFAVIQYSLGDGEG-KFGINPDTGDIYIL 2466

Query: 101  QCLDYETEDSYRFTVYATD-------TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
              LD E +D Y  T  A D            S  V I+V+++ND+ P+F   Q+   +  
Sbjct: 2467 SALDREKKDHYTLTAVARDNPGDISSNRRENSVQVLITVLDINDFRPQFSKSQFSTSV-- 2524

Query: 154  IPLADLTPGSVIGKVEAADGDKGDR--VTLSLRGPYEKMFSIN-DSGHISIVDLSALNTS 210
                +   G+ +  + A D D+GD   VT S+ GP  + F IN DSG I+       +  
Sbjct: 2525 --YENEPAGTSVITMTATDLDEGDNGVVTYSIEGPGAEAFKINKDSGLIT-SRRRLQSYE 2581

Query: 211  TIQLVVVATDTGNPP 225
               L VVATD G PP
Sbjct: 2582 RFNLTVVATDKGRPP 2596



 Score = 62.0 bits (149), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 68/206 (33%), Positives = 103/206 (50%), Gaps = 20/206 (9%)

Query: 45  FSKNEYSVSALENLPVNYVLLTV--TTNKPRDL-RVKYWLSNDYGERFSISRQ-GDISLM 100
           FSK  Y+VS  EN  V   +L V  T N      +V Y+ S+D  +RFS+ +  G I LM
Sbjct: 466 FSKALYNVSLPENATVGTTVLQVHATDNDVGSYGKVSYFFSDD-PDRFSLDKDTGVILLM 524

Query: 101 QCLDYETEDSYRFTVYATDTL-MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADL 159
             LD+ET   Y  TV A D     T+  + I+V++VND  P F   Q E +L  +   + 
Sbjct: 525 ARLDFETMQRYTLTVIARDGGGEETAGRIRINVLDVNDNVPTF---QKEAYLGALRENEP 581

Query: 160 TPGSVIGKVEAADGDK--GDRVTLSL--RGPYEKMFSINDS---GHISI---VDLSALNT 209
           +   V+ ++ A+D D    +++T S+     + + F I  S   G IS+   +D   +  
Sbjct: 582 SVTQVV-RLRASDEDSPPNNQITYSIVHASAFREYFDITVSEGYGVISVNHPLDYEQVVN 640

Query: 210 STIQLVVVATDTGNPPRQASVPAIMH 235
             I L V+A D GNPP  ++VP  + 
Sbjct: 641 GVIYLTVMAKDAGNPPLNSTVPVTIE 666



 Score = 47.8 bits (112), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 59/206 (28%), Positives = 94/206 (45%), Gaps = 20/206 (9%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTT---NKPRDL---RVKYWLSNDYGERFSISRQGDIS 98
           FSK  Y ++ +E++     +L +     ++ R+     + Y L      R + +R G+I+
Sbjct: 677 FSKPSYVIAVMEDIMAGATVLFLNATDLDRSREYGQESIIYSLEGSSHFRIN-ARSGEIT 735

Query: 99  LMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLAD 158
               LD E +  Y   V A D  +       I++VN+   D    YP ++     I L +
Sbjct: 736 TTSLLDREAKSEYILIVRAVDGGVGHHQKTGIAMVNITLLDINDNYPTWKDAPYFINLVE 795

Query: 159 LT-PGSVIGKVEAADGDKGDRVTL--SLRGPYEKMFSIND-SGHI--SIVDLSALNTS-- 210
           +T P S +  V A D D G+  T+  S+R P  K +S+N  SG I  S V L   N +  
Sbjct: 796 MTPPNSDVTTVVAVDPDLGENGTVVYSIRPP-NKFYSLNSTSGKIRTSGVQLDRENPNPQ 854

Query: 211 ----TIQLVVVATDTGNPPRQASVPA 232
                 ++VV  TD G PP +A+  A
Sbjct: 855 EAELMRRIVVSVTDCGRPPLRATSSA 880



 Score = 47.4 bits (111), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 50/160 (31%), Positives = 78/160 (48%), Gaps = 16/160 (10%)

Query: 88   RFSIS-RQGDISLMQCLDYETEDSYRFTVYATDT-----LMTTSATVNISVVNVNDWDPR 141
            +FS+  R G +  +  LD ET  SY   + A D        T +ATV ++V++VND  P 
Sbjct: 1048 KFSVGFRDGVVRTVVSLDRETVASYALILEAIDNGPTGNRRTGTATVYVTVLDVNDNRPI 1107

Query: 142  FRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSL-RGPYEKMFSINDSGH 198
            F    YE  +P     D+   S I +V+A D D+G   RV   + +G     F IN S  
Sbjct: 1108 FLQSSYEASVPE----DIPAASSIVQVKATDADEGVNGRVWYRIVKGNEHNNFRINPSSG 1163

Query: 199  ISIVDLSALN---TSTIQLVVVATDTGNPPRQASVPAIMH 235
            + +  +  L+    S+  L V A +T + P ++SV  I++
Sbjct: 1164 LLMRGVRPLDREQNSSHVLEVEAYNTEHGPMRSSVRVIVY 1203



 Score = 45.4 bits (106), Expect = 0.051,   Method: Compositional matrix adjust.
 Identities = 39/119 (32%), Positives = 58/119 (48%), Gaps = 11/119 (9%)

Query: 95   GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFL 151
            G +   + +DYE      FTV A+D      +    V + +V++ND +P F  P Y+  +
Sbjct: 2358 GKVVANRTVDYEEVQWLNFTVRASDNGSPRRSAEIPVYLQIVDINDNNPIFSQPSYQKAV 2417

Query: 152  PHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSIN-DSGHISIVDLSALN 208
                  D+  G+VI +V+A D D G    +    G  E  F IN D+G I I  LSAL+
Sbjct: 2418 ----FEDVPLGTVILRVKATDADSGRFAVIQYSLGDGEGKFGINPDTGDIYI--LSALD 2470



 Score = 45.1 bits (105), Expect = 0.064,   Method: Compositional matrix adjust.
 Identities = 53/199 (26%), Positives = 91/199 (45%), Gaps = 26/199 (13%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRV------KYWLSNDYGERF-----SIS 92
           +F+ +EYSV+  E   V + L      + +D  +      + +L  +    F     SI 
Sbjct: 353 EFNSSEYSVAIPELAQVGFALPLFIQVQDKDEHLGPNSVFEVYLVGNNSNHFIISPTSIQ 412

Query: 93  RQGDISLMQC--LDYETEDSYRFTVYATDTL--MTTSATVNISVVNVNDWDPRFRYPQYE 148
            + DI +     LD+ET   Y F+++A +++      A V IS++N ND  P F    Y 
Sbjct: 413 GKADIRVRVAVPLDFETIPRYEFSLFANESIPEHVGFARVKISLINENDNRPVFSKALYN 472

Query: 149 LFLPHIPLADLTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSINDSGHISIVDLSA 206
           + LP     + T G+ + +V A D D G   +V+       ++     D+G I +  ++ 
Sbjct: 473 VSLPE----NATVGTTVLQVHATDNDVGSYGKVSYFFSDDPDRFSLDKDTGVILL--MAR 526

Query: 207 LNTSTIQ---LVVVATDTG 222
           L+  T+Q   L V+A D G
Sbjct: 527 LDFETMQRYTLTVIARDGG 545



 Score = 44.7 bits (104), Expect = 0.071,   Method: Compositional matrix adjust.
 Identities = 39/127 (30%), Positives = 63/127 (49%), Gaps = 12/127 (9%)

Query: 56   ENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGERFSI-SRQGDISLMQ-CLDYETEDS 110
            EN P  + +L VT    +   + ++ Y +     +RF I +  G I +    +D E  D+
Sbjct: 2086 ENSPPGFSVLQVTATDADSGLNKQLDYRIEGGGQDRFLIDATTGVIRVANLSIDREERDA 2145

Query: 111  YRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGK 167
            Y+ TV A D     ++ +ATV+I + +VND  P F  P   + +P       TPG+V+ +
Sbjct: 2146 YQLTVVAVDQGTPALSGTATVSIFIDDVNDCRPEFINPIQTVSVPE----SATPGTVVAE 2201

Query: 168  VEAADGD 174
            V A D D
Sbjct: 2202 VTAIDRD 2208



 Score = 44.3 bits (103), Expect = 0.099,   Method: Compositional matrix adjust.
 Identities = 46/132 (34%), Positives = 62/132 (46%), Gaps = 13/132 (9%)

Query: 95  GDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHI 154
           G + L Q LD ET+  +      +D+      TVNI V +VND  PRF    Y + +P  
Sbjct: 91  GVVWLRQPLDRETKSEFTVEFSVSDSQGVIKGTVNIQVGDVNDNAPRFHNQPYSVRIP-- 148

Query: 155 PLADLTP-GSVIGKVEAADGDK--GDRVTLSLRGPYEKMFSINDSGHISIVDLSALN--- 208
              + TP G+ I  V A D D+  G  V  S + P    F+I DSG   +  +  L+   
Sbjct: 149 ---ENTPVGTPIFIVNATDPDQGAGGSVLYSFQPP-SSFFAI-DSGRGIVTVIRELDYEV 203

Query: 209 TSTIQLVVVATD 220
           T   QL V ATD
Sbjct: 204 TQAYQLQVNATD 215



 Score = 42.7 bits (99), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 67/278 (24%), Positives = 108/278 (38%), Gaps = 59/278 (21%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTTNKPRD-----LRVKYWLSNDYGERFSI-SRQGDI 97
           +F    YSV   EN PV   +  V    P       +   +   + +   F+I S +G +
Sbjct: 137 RFHNQPYSVRIPENTPVGTPIFIVNATDPDQGAGGSVLYSFQPPSSF---FAIDSGRGIV 193

Query: 98  SLMQCLDYETEDSYRFTVYATD----TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
           ++++ LDYE   +Y+  V ATD      ++T A + I++ +V D DP F      + LP+
Sbjct: 194 TVIRELDYEVTQAYQLQVNATDQDKNKPLSTLANLAITITDVQDMDPIF------INLPY 247

Query: 154 IP--LADLTPGSVIGKVEAADGDKG--------------------DRVT--LSLRGPYEK 189
                 +  PG+ +  + A D DKG                    D ++  L+L GP ++
Sbjct: 248 STNIYENSPPGTTVRMITAIDQDKGRPRGIGYTIVSGNTNSIFALDYISGALTLNGPLDR 307

Query: 190 MFSINDSGHISIVDLSALNTSTIQLVVVATDTGNPPRQASVPAIMHFPEAIVQQASSKLN 249
                 SG I  V  + LN                P  A+V    +     V   + + N
Sbjct: 308 ENPFYSSGFILTVKGTELNDDRT------------PSNATVTTTFNILVIDVNDNAPEFN 355

Query: 250 SGTSSTVLIILGVVLIVLGFVIILLILYIHKNKHTKNN 287
           S   S  +  L  V    GF + L I    K++H   N
Sbjct: 356 SSEYSVAIPELAQV----GFALPLFIQVQDKDEHLGPN 389



 Score = 41.6 bits (96), Expect = 0.63,   Method: Compositional matrix adjust.
 Identities = 41/162 (25%), Positives = 71/162 (43%), Gaps = 25/162 (15%)

Query: 93   RQGDISLMQCLDYETEDSYRFTVYATD--------TLMTTSATVNISVVNVNDWDPRFRY 144
            R G + +   L+ E   +Y  T+   D        ++   +A + ++V++VND  PRFR 
Sbjct: 2242 RTGAVKIKNPLNRELVATYEVTISVHDNASEVTDRSVSVPNAKLTVNVLDVNDNTPRFRP 2301

Query: 145  PQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSGHISIVDL 204
                 F   I L   T G+ +  + A D DKG    ++    YE +  ++  G+  + D 
Sbjct: 2302 FGVTYFTERI-LEGATQGTTLISISAVDPDKGANGQIT----YE-LLDLSPEGYACLEDQ 2355

Query: 205  SA--------LNTSTIQ---LVVVATDTGNPPRQASVPAIMH 235
            SA        ++   +Q     V A+D G+P R A +P  + 
Sbjct: 2356 SAGKVVANRTVDYEEVQWLNFTVRASDNGSPRRSAEIPVYLQ 2397



 Score = 41.2 bits (95), Expect = 0.91,   Method: Compositional matrix adjust.
 Identities = 60/208 (28%), Positives = 93/208 (44%), Gaps = 28/208 (13%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGERFSISRQGDI--S 98
            QFSK+++S S  EN P    ++T+T    ++  +  V Y +     E F I++   +  S
Sbjct: 2514 QFSKSQFSTSVYENEPAGTSVITMTATDLDEGDNGVVTYSIEGPGAEAFKINKDSGLITS 2573

Query: 99   LMQCLDYETEDSYRFTVYATDTL---MTTSATVNISVVNVNDWDPRFRYPQYELFL---P 152
              +   YE    +  TV ATD     +  +  ++I V+++ND  P F  P     L    
Sbjct: 2574 RRRLQSYE---RFNLTVVATDKGRPPLWGTTMLHIEVIDINDNRPVFVRPPNGTILHIKE 2630

Query: 153  HIPLADLTPGSVIGKVEAADGDKG--DRVTLSL--RGPYEK---MFSIND-SGHI-SIVD 203
             IPL      S + +V A D D+G    V  SL   G   K    FSI+  SG I + + 
Sbjct: 2631 EIPLR-----SNVYEVYATDKDEGLNGAVLYSLLKTGAGNKDWEYFSIDAVSGLIQTAMR 2685

Query: 204  LSALNTSTIQLVVVATDTGNPPRQASVP 231
            L     +   L++VA+D G P  +   P
Sbjct: 2686 LDREKQAEYNLIIVASDQGQPAYETMQP 2713



 Score = 38.5 bits (88), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 58/203 (28%), Positives = 92/203 (45%), Gaps = 23/203 (11%)

Query: 43   LQFSKNEYSVSALENLPVNYVLLTVTTNKPRDL-RVKYWLS-NDYGERFSISR----QGD 96
            +QFS + Y    +EN+P+   +L V      +L ++ Y    N   +  S+ +     G 
Sbjct: 1317 VQFSNSSYEAVIMENIPLGSEVLRVQARSIDNLNQITYKFDPNTNAQALSLFKINGITGV 1376

Query: 97   ISLMQCLDYETEDSYRFTVYATDTLMTTSATVN--ISVVNVNDWDPRFRYPQYELFLPHI 154
            I++   +D E  D Y  TV A D      +TV   I+V++ ND  P+F           +
Sbjct: 1377 ITVKGQVDREKGDFYTLTVVADDGGPKVDSTVKVTITVLDENDNSPQFDITSDSAV--SV 1434

Query: 155  PLADLTPGSVIGKVEAADGDKGD--RVTLSL-RGPYEKMFSI---NDS-GHISI---VDL 204
            P  D   G  +  V A D D G   +VT SL  G   + F I   ND+ G + +   +D 
Sbjct: 1435 P-EDSVVGRRVAVVLARDPDAGSNGQVTFSLTAGNVGQAFEIRTTNDTYGEVLVARPLDR 1493

Query: 205  SALNTSTIQLVVVATDTGNPPRQ 227
              L+  T++  + A+D G PPR+
Sbjct: 1494 ELLDHYTLR--IQASDGGVPPRR 1514


>gi|18087749|ref|NP_291060.1| protocadherin gamma-C4 [Mus musculus]
 gi|13876362|gb|AAK26101.1| protocadherin gamma C4 [Mus musculus]
 gi|40673932|gb|AAH64808.1| Protocadherin gamma subfamily C, 4 [Mus musculus]
 gi|148678188|gb|EDL10135.1| mCG133388, isoform CRA_r [Mus musculus]
          Length = 941

 Score = 68.6 bits (166), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 65/230 (28%), Positives = 102/230 (44%), Gaps = 22/230 (9%)

Query: 13  LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKP 72
           LV+ A+   N  R   A L VS    +     F ++ Y +S LE+ P   VL+ +  + P
Sbjct: 213 LVLTAVDGGNPPRSGTAELRVSVLDVNDNAPAFQQSSYRISVLESAPAGMVLIQLNASDP 272

Query: 73  RDL----RVKYWLSNDYGER----FSI-SRQGDISLMQCLDYETEDSYRFTVYATD---T 120
            DL     V +  S    +R    FS+    G ++L   LD+E+E+ Y F V A D    
Sbjct: 273 -DLGPSGNVTFSFSGHTPDRVRNLFSLHPTTGKLTLQGPLDFESENYYEFDVRARDGGSP 331

Query: 121 LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVT 180
            M    ++ + +++VND  P          LP        PG+V+  +   D D G    
Sbjct: 332 AMEQHCSLRVDLLDVNDNAPHITVTSELGTLPE----SAEPGTVVALISVQDPDSGSNGD 387

Query: 181 LSLRGPYEKMFSINDS--GHISIVDLSALN---TSTIQLVVVATDTGNPP 225
           +SLR P    F++  +     S+V    L+    S+  ++V A+D GNPP
Sbjct: 388 VSLRIPDHLPFALKSAFRNQFSLVTAGPLDREARSSYDIMVTASDAGNPP 437



 Score = 44.3 bits (103), Expect = 0.089,   Method: Compositional matrix adjust.
 Identities = 44/169 (26%), Positives = 77/169 (45%), Gaps = 27/169 (15%)

Query: 77  VKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVV 133
           + + L + +  +FS+   G       LD E   SY   V A+D     ++T  T+ +++ 
Sbjct: 396 LPFALKSAFRNQFSLVTAGP------LDREARSSYDIMVTASDAGNPPLSTHRTIFLNIS 449

Query: 134 NVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMF 191
           +VND  P F    +E+F+P     +  PG ++  + A+D D G    ++ SL  P  +  
Sbjct: 450 DVNDNPPSFFQRSHEVFVPE----NNRPGDLLCSLAASDPDSGLNALISYSLLEPRNR-- 503

Query: 192 SINDSGHISIVDLSAL----------NTSTIQLVVVATDTGNPPRQASV 230
            ++ S  IS+   +             T T+Q  V A D G+PP  ++V
Sbjct: 504 DVSASSFISLNPQTGAVHATRSFDYEQTQTLQFEVQARDRGSPPLSSTV 552



 Score = 43.5 bits (101), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 49/190 (25%), Positives = 83/190 (43%), Gaps = 15/190 (7%)

Query: 95  GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYE--L 149
           G +   +  DYE   + +F V A D     ++++ TV + V+++ND  P    P+     
Sbjct: 518 GAVHATRSFDYEQTQTLQFEVQARDRGSPPLSSTVTVRLFVLDLNDNAPAVLRPRARPGS 577

Query: 150 FLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIND-SGHISIVDLS 205
             P      +  G ++ KV A D D G    +S   L  P   +F+++  +G +      
Sbjct: 578 LCPQALPPSVGAGHLVTKVTAVDLDSGYNAWVSYQLLEAPDPSLFAVSRYAGEVRTAVPI 637

Query: 206 ALNTSTIQLVVVATDTGNPPRQASVPAIMHFPE---AIVQ--QASSKLNSGTSSTVLIIL 260
             +    +LV+V  D+G+PP   SV  ++   E    +V   + SS    G S   L  L
Sbjct: 638 PADLPPQKLVIVVKDSGSPPLSTSVTLLVSLEEDTHPVVPDLRESSAPREGESRLTL-YL 696

Query: 261 GVVLIVLGFV 270
            V L+ + FV
Sbjct: 697 AVSLVAICFV 706


>gi|395817387|ref|XP_003782153.1| PREDICTED: protocadherin gamma-C4 [Otolemur garnettii]
          Length = 832

 Score = 68.6 bits (166), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 65/230 (28%), Positives = 103/230 (44%), Gaps = 22/230 (9%)

Query: 13  LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKP 72
           LV+ A+   N  R   A L VS    +     F ++ Y +S LE+ P   VL+ +  + P
Sbjct: 210 LVLTAVDGGNPPRSGTAELRVSVLDVNDNAPAFQQSSYRISVLESAPAGMVLVQLNASDP 269

Query: 73  RDL----RVKYWLSNDYGER----FSISR-QGDISLMQCLDYETEDSYRFTVYATD---T 120
            DL     V +  S    +R    FS+    G ++L+  LD+E+E+ Y F V A D    
Sbjct: 270 -DLGPSGNVTFSFSGHTPDRVRNLFSLHPITGKLTLLGPLDFESENYYEFDVRARDGGSP 328

Query: 121 LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVT 180
            M    ++ + +++VND  P          LP        PG+V+  +   D D G    
Sbjct: 329 AMEQHCSLRVDLLDVNDNAPYITVTSELGTLPE----SAEPGTVVALISVQDPDSGSNGD 384

Query: 181 LSLRGPYEKMFSINDS--GHISIVDLSALN---TSTIQLVVVATDTGNPP 225
           +SLR P    F++  +     S+V    L+    S+  ++V A+D GNPP
Sbjct: 385 VSLRIPDHLPFALKSAFRNQFSLVTAGPLDREAKSSYDIMVTASDAGNPP 434



 Score = 47.4 bits (111), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 45/169 (26%), Positives = 78/169 (46%), Gaps = 27/169 (15%)

Query: 77  VKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVV 133
           + + L + +  +FS+   G       LD E + SY   V A+D     ++T  T+ +++ 
Sbjct: 393 LPFALKSAFRNQFSLVTAGP------LDREAKSSYDIMVTASDAGNPPLSTHRTIFLNIS 446

Query: 134 NVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMF 191
           +VND  P F    +E+F+P     +  PG ++  + A+D D G    ++ SL  P  +  
Sbjct: 447 DVNDNPPSFFQRSHEVFVPE----NNRPGDLLCSLAASDPDSGLNALISYSLLEPRNR-- 500

Query: 192 SINDSGHISIVDLSAL----------NTSTIQLVVVATDTGNPPRQASV 230
            ++ S  IS+   +             T T+Q  V A D GNPP  ++V
Sbjct: 501 DVSASSFISLNPQTGAVHATRSFDYEQTQTLQFEVQARDRGNPPLSSTV 549



 Score = 43.9 bits (102), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 49/190 (25%), Positives = 83/190 (43%), Gaps = 15/190 (7%)

Query: 95  GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYEL-- 149
           G +   +  DYE   + +F V A D     ++++ TV + V+++ND  P    P+     
Sbjct: 515 GAVHATRSFDYEQTQTLQFEVQARDRGNPPLSSTVTVRLFVLDLNDNAPAVLRPRARPGS 574

Query: 150 FLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIND-SGHISIVDLS 205
             P      +  G ++ KV A D D G    +S   L  P   +F+++  +G +      
Sbjct: 575 LCPQALPPSVGAGHLVTKVTAVDLDSGYNAWVSYQLLEAPDPSLFAVSRYAGEVRTAVPI 634

Query: 206 ALNTSTIQLVVVATDTGNPPRQASVPAIMHFPE---AIVQ--QASSKLNSGTSSTVLIIL 260
             +    +LV+V  D+G+PP   SV  ++   E    +V   + SS    G S   L  L
Sbjct: 635 PADLPPQKLVIVVKDSGSPPLSTSVTLLVSLEEDTHPVVPDLRESSAPREGESRLTL-YL 693

Query: 261 GVVLIVLGFV 270
            V L+ + FV
Sbjct: 694 AVSLVAICFV 703


>gi|74228343|dbj|BAE24021.1| unnamed protein product [Mus musculus]
          Length = 874

 Score = 68.6 bits (166), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 65/230 (28%), Positives = 102/230 (44%), Gaps = 22/230 (9%)

Query: 13  LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKP 72
           LV+ A+   N  R   A L VS    +     F ++ Y +S LE+ P   VL+ +  + P
Sbjct: 213 LVLTAVDGGNPPRSGTAELRVSVLDVNDNAPAFQQSSYRISVLESAPAGMVLIQLNASDP 272

Query: 73  RDL----RVKYWLSNDYGER----FSI-SRQGDISLMQCLDYETEDSYRFTVYATD---T 120
            DL     V +  S    +R    FS+    G ++L   LD+E+E+ Y F V A D    
Sbjct: 273 -DLGPSGNVTFSFSGHTPDRVRNLFSLHPTTGKLTLQGPLDFESENYYEFDVRARDGGSP 331

Query: 121 LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVT 180
            M    ++ + +++VND  P          LP        PG+V+  +   D D G    
Sbjct: 332 AMEQHCSLRVDLLDVNDNAPHITVTSELGTLPE----SAEPGTVVALISVQDPDSGSNGD 387

Query: 181 LSLRGPYEKMFSINDS--GHISIVDLSALN---TSTIQLVVVATDTGNPP 225
           +SLR P    F++  +     S+V    L+    S+  ++V A+D GNPP
Sbjct: 388 VSLRIPDHLPFALKSAFRNQFSLVTAGPLDREARSSYDIMVTASDAGNPP 437



 Score = 44.7 bits (104), Expect = 0.069,   Method: Compositional matrix adjust.
 Identities = 44/169 (26%), Positives = 77/169 (45%), Gaps = 27/169 (15%)

Query: 77  VKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVV 133
           + + L + +  +FS+   G       LD E   SY   V A+D     ++T  T+ +++ 
Sbjct: 396 LPFALKSAFRNQFSLVTAGP------LDREARSSYDIMVTASDAGNPPLSTHRTIFLNIS 449

Query: 134 NVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMF 191
           +VND  P F    +E+F+P     +  PG ++  + A+D D G    ++ SL  P  +  
Sbjct: 450 DVNDNPPSFFQRSHEVFVPE----NNRPGDLLCSLAASDPDSGLNALISYSLLEPRNR-- 503

Query: 192 SINDSGHISIVDLSAL----------NTSTIQLVVVATDTGNPPRQASV 230
            ++ S  IS+   +             T T+Q  V A D G+PP  ++V
Sbjct: 504 DVSASSFISLNPQTGAVHATRSFDYEQTQTLQFEVQARDRGSPPLSSTV 552



 Score = 43.9 bits (102), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 49/190 (25%), Positives = 83/190 (43%), Gaps = 15/190 (7%)

Query: 95  GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYEL-- 149
           G +   +  DYE   + +F V A D     ++++ TV + V+++ND  P    P+     
Sbjct: 518 GAVHATRSFDYEQTQTLQFEVQARDRGSPPLSSTVTVRLFVLDLNDNAPAVLRPRARPGS 577

Query: 150 FLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIND-SGHISIVDLS 205
             P      +  G ++ KV A D D G    +S   L  P   +F+++  +G +      
Sbjct: 578 LCPQALPPSVGAGHLVTKVTAVDLDSGYNAWVSYQLLEAPDPSLFAVSRYAGEVRTAVPI 637

Query: 206 ALNTSTIQLVVVATDTGNPPRQASVPAIMHFPE---AIVQ--QASSKLNSGTSSTVLIIL 260
             +    +LV+V  D+G+PP   SV  ++   E    +V   + SS    G S   L  L
Sbjct: 638 PADLPPQKLVIVVKDSGSPPLSTSVTLLVSLEEDTHPVVPDLRESSAPREGESRLTL-YL 696

Query: 261 GVVLIVLGFV 270
            V L+ + FV
Sbjct: 697 AVSLVAICFV 706


>gi|157118805|ref|XP_001653269.1| cadherin [Aedes aegypti]
 gi|108875581|gb|EAT39806.1| AAEL008421-PA [Aedes aegypti]
          Length = 1736

 Score = 68.6 bits (166), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 62/197 (31%), Positives = 96/197 (48%), Gaps = 12/197 (6%)

Query: 37  GTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLS--NDYGERFSISRQ 94
           G + +  +F K  Y V   E   +N  ++ V    P +  VKY+++  ND   +FSI ++
Sbjct: 599 GPNTKPPRFIKPVYDVQVSEGAEINSTVIVVKAEDPENDPVKYFVTTGNDL-RQFSIGKE 657

Query: 95  -GDISLMQCLDYETEDSYRFTVYATDTL-MTTSATVNISVVNVNDWDPRFRYPQYELFLP 152
            G IS+++ LD E    Y+  + A D+  + +SATVNI V ++ND +P F     E  LP
Sbjct: 658 SGVISVIRKLDREDLTRYQLIIRAEDSGGLASSATVNIKVTDINDKNPEFD----ENVLP 713

Query: 153 HIPLADL-TPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSIND-SGHI-SIVDLSALNT 209
           +I   D     ++IG V A D D+G    ++   P +  F IN  +G I +   L     
Sbjct: 714 YIFTVDEGRDNALIGTVHATDADEGMNAEITYTIPSDIPFKINSRTGEIRTKSQLDYEKQ 773

Query: 210 STIQLVVVATDTGNPPR 226
              + VV A D    PR
Sbjct: 774 KEYKFVVTAQDGAPEPR 790



 Score = 44.7 bits (104), Expect = 0.086,   Method: Compositional matrix adjust.
 Identities = 34/107 (31%), Positives = 51/107 (47%), Gaps = 10/107 (9%)

Query: 92  SRQGDISLMQCLDYETEDSYRFTVYATDTL---MTTSATVNISVVNVNDWDPRFRYPQYE 148
           SR G+I     LDYE +  Y+F V A D        +A+V + V ++ D  PRF     E
Sbjct: 757 SRTGEIRTKSQLDYEKQKEYKFVVTAQDGAPEPRLGTASVTVKVRDIPDEVPRFMESMLE 816

Query: 149 LFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSL-RGPYEKMFSIN 194
           + +P     +  P   +  V A D D    +T +L RGP + +F I+
Sbjct: 817 VKIP-----ENVPDMAVTTVRAFDPDTKPEITYTLKRGPGD-LFKID 857



 Score = 43.1 bits (100), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 75/271 (27%), Positives = 110/271 (40%), Gaps = 45/271 (16%)

Query: 53   SALE-NLPVNYVLLTVTTNKPRDLRVK----YWLSNDYGERFSI-SRQGDISLMQCLDYE 106
            S LE  +P N   + VTT +  D   K    Y L    G+ F I +R G I  ++ LDYE
Sbjct: 813  SMLEVKIPENVPDMAVTTVRAFDPDTKPEITYTLKRGPGDLFKIDARTGLIKTIRGLDYE 872

Query: 107  TEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLA---DLTPGS 163
             +  +   +   +   T        +V V D   R   P   + +P  P+    DL  GS
Sbjct: 873  KDKIHELIIGTLENNGTNPGDYIKIIVEVED---RNDIPPVFVSIPE-PININDDLPIGS 928

Query: 164  VIGKVEAADGDKGD-----RVTLSLRGPYEKMFSIN-DSGHISIVDLSALNTSTIQLV-V 216
            ++G + A DGD        R  +  RG   K F ++ DSG + I D       T  LV V
Sbjct: 929  IVGSMPAVDGDGSSPGNVVRYEMVGRGKALKYFQVDADSGIVRIRDELNKEDDTEYLVDV 988

Query: 217  VATDTGNPPRQ--ASVPA-IMHFPEAIVQQASSKLNSGTSSTVLIILGVVLIVLGF---- 269
             A D G P     +++P  + H P      A S++++G       I+ + +  L F    
Sbjct: 989  RAYDMGEPQLSSVSTLPIYVSHIPANPNDSAESRVDAGG------IINLEVQGLAFSDDS 1042

Query: 270  ------------VIILLILYIHKNKHTKNNG 288
                          I LI  I+  K TK+NG
Sbjct: 1043 YTTSVPESTGINATIKLIQIINSKKATKHNG 1073


>gi|449278207|gb|EMC86141.1| Protocadherin Fat 4, partial [Columba livia]
          Length = 4990

 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 74/269 (27%), Positives = 115/269 (42%), Gaps = 42/269 (15%)

Query: 2    INEDD-----FLQPITLV---VRAIQYDNQDRYALATLIVSKAGTSLRELQ--------- 44
            ++EDD     FL P+T V    RA+ Y+ Q  Y L T+     G     ++         
Sbjct: 1886 VSEDDEEGMFFLNPVTGVFNLTRALDYEAQQYYIL-TVRAEDGGGQFTTIRVYFNILDIN 1944

Query: 45   -----FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWL-SNDYGERFSISRQG 95
                 FS   YS S +ENL     +L  +     D    ++ + + S D G +F I   G
Sbjct: 1945 DNPPVFSMTSYSTSLMENLSPGSAILNFSVTDADDGSNSQLSFSIASGDSGGQFGIDNSG 2004

Query: 96   DISLMQCLDYETEDSYRFTVYATD------TLMTTSATVNISVVNVNDWDPRFRYPQYEL 149
             +S+ Q LD E++  Y   V   D      +  T++A V+I +++VND  P F  P+   
Sbjct: 2005 VLSIRQPLDRESQSFYSLVVQVHDMAPLPASRFTSTAQVSIILLDVNDSPPSFISPKVTY 2064

Query: 150  FLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIND-SGHISIV-DLS 205
               + P+      +++ K +A D D G    +  SL  P    FSI    G + +  +L 
Sbjct: 2065 VPENTPI-----DTIVFKAQATDPDSGPNSYIEYSLLRPLGNKFSIGSIDGEVRLTGELD 2119

Query: 206  ALNTSTIQLVVVATDTGNPPRQASVPAIM 234
                S   L VVATD G P   +S   ++
Sbjct: 2120 REAVSNYTLTVVATDKGQPSLSSSTDVVV 2148



 Score = 62.0 bits (149), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 61/193 (31%), Positives = 93/193 (48%), Gaps = 24/193 (12%)

Query: 50   YSVSALENLPVNYVLLTVTTNKPRDLRV----KYWLSNDYGERFSIS-RQGDISLMQCLD 104
            +S S  EN P+ + +  VTT+   D+ V    +Y +  D    F+I+   GDI++ + L+
Sbjct: 2785 FSASVPENAPLGFTVTRVTTSD-EDIGVNAVSRYSI-RDTSLPFTINPSTGDITISRPLN 2842

Query: 105  YETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSV 164
             E  D YR  V A D+  T S  V I V++VND  PRF  P Y L  P +P   L     
Sbjct: 2843 REDTDRYRIRVSAHDSGWTVSTDVTIFVMDVNDNAPRFTKPSYYLDCPELPGVGLK---- 2898

Query: 165  IGKVEAADGDKGD--RVTLSLRGPYEKMFSIN-DSGHI---------SIVDLSALNTSTI 212
            + +V A D D+G   +V   ++   E  F IN  +G I         +    S +N +  
Sbjct: 2899 VTQVSATDPDEGSNGQVFYFIKSQSE-FFRINATTGEIFNKQYLRYQNSSGSSNVNINRH 2957

Query: 213  QLVVVATDTGNPP 225
              +V ++D G+PP
Sbjct: 2958 SFIVTSSDRGSPP 2970



 Score = 61.6 bits (148), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 53/186 (28%), Positives = 94/186 (50%), Gaps = 10/186 (5%)

Query: 45  FSKNEYSVSALENLPVNYVLLTV-TTNKPRDLRVKYWLS-NDYGERFSISR-QGDISLMQ 101
           FS+  YS    EN+ + Y + TV  +    +  + Y ++  D    F+I+R  G I+   
Sbjct: 799 FSQGMYSFVVFENVALGYHVGTVFASTMDLNTNISYLITTGDQRGMFAINRVTGQITTAS 858

Query: 102 CLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTP 161
            +D E +  Y+  V A+   +T  A VNI+V ++ND  P F +    + +    + +   
Sbjct: 859 IIDREEQAFYQLKVVASGGAITGDAMVNITVKDLNDNSPHFIHAVESVNV----VENWKA 914

Query: 162 GSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIND-SGHISIVDLSALNTSTIQLVVVA 218
           G  I + +A D D+G    V  SL+   + +FSIN+ +G IS++    +N  + Q+ ++A
Sbjct: 915 GHTIFQAKAVDPDEGVNGMVLYSLKQNPKGLFSINEQTGAISLIGPLDINAGSYQVEILA 974

Query: 219 TDTGNP 224
           +D G P
Sbjct: 975 SDMGVP 980



 Score = 55.5 bits (132), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 64/225 (28%), Positives = 101/225 (44%), Gaps = 37/225 (16%)

Query: 45   FSKNEYSVSALENLPV--NYVLLTVTTNKPRDLRVK--YWL--SNDYGERFSISRQGDIS 98
            F  + YSV+  ENL      +L  V  +  + L  K  Y L   N+ G  F++S  G++ 
Sbjct: 2265 FELSPYSVNVPENLETLPKVILQVVARDDDQGLNSKLTYVLVGGNEEGA-FTLSASGELR 2323

Query: 99   LMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIP 155
            L+Q LD E ++ Y   + A D+    +T + T+ ++V +VND  P F +  Y   +P   
Sbjct: 2324 LVQSLDREMKEQYILLITAADSGSPALTGTGTIAVTVDDVNDNVPTFAFNMYSATVPE-- 2381

Query: 156  LADLTPGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSINDS-GHI---SIVDLS----- 205
              D   G+ I  V ++D D      +S +    +  F+IN S G I   +++D       
Sbjct: 2382 --DAPTGTDILLVNSSDADASTNAVISYKLTGGDSQFTINPSTGQIITSALLDRESRENY 2439

Query: 206  -------------ALNTSTIQLVVVATDTGNPPRQASVPAIMHFP 237
                         AL++ST  LV VA    NPP+    P + H P
Sbjct: 2440 TLVVVASDGGFPRALSSSTSVLVAVADVNDNPPKFQHHPYVTHVP 2484



 Score = 55.5 bits (132), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 34/101 (33%), Positives = 49/101 (48%), Gaps = 5/101 (4%)

Query: 77   VKYWLSNDYGERFSIS-RQGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNV 135
            V Y + +   + F I    GD+   + LD E    Y   V A D L ++   +NI+V +V
Sbjct: 1781 VTYTIISGADDSFHIDPESGDLIATKRLDRERRSKYSLLVRADDGLQSSDMRINITVSDV 1840

Query: 136  NDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG 176
            ND  P+F  P Y   +P     D TPGS++  + A D D G
Sbjct: 1841 NDHIPKFSRPVYSFDIPE----DATPGSLVAAILATDDDSG 1877



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 46/158 (29%), Positives = 82/158 (51%), Gaps = 13/158 (8%)

Query: 87   ERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRF 142
            +RF+I S  G ++L+  LD+E   SY   + A D+    ++++  ++I V++ ND  P F
Sbjct: 1262 KRFAIDSSTGQVTLVGKLDHEATASYLLVIQAVDSGAVSLSSTCMLSIDVLDENDNSPSF 1321

Query: 143  RYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTL--SLRGPY-EKMFSIN-DSGH 198
              P+  L +    L ++  G ++  V A D D GD   L  S+ G      FSI+ ++G 
Sbjct: 1322 --PKTTLLVD--VLENMRVGELVSSVTATDSDSGDNADLHYSITGTNNHGTFSISPNTGS 1377

Query: 199  ISIVDLSALNTSTI-QLVVVATDTGNPPRQASVPAIMH 235
            I +       T ++ +L + A D G PPR +++  ++H
Sbjct: 1378 IFLAKKLDFETQSLYKLNITAKDQGRPPRSSTMSVVIH 1415



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 57/192 (29%), Positives = 92/192 (47%), Gaps = 15/192 (7%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWL-SNDYGERFSI-SRQGDISL 99
            F++  Y V   EN      L+ V     ++  + +V+Y + S D    F I S  G I++
Sbjct: 2160 FAQKLYKVEVGENTLTGTDLIQVFATDGDEGTNGQVRYAIVSGDADNEFRIDSVTGVITV 2219

Query: 100  MQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
             + LD E + SY  TV + D   +  T + TVNI + +VND+ P F    Y +   ++P 
Sbjct: 2220 AKPLDREKKPSYTLTVQSADRGSSPRTNTTTVNIILKDVNDYVPTFELSPYSV---NVPE 2276

Query: 157  ADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSINDSGHISIVD-LSALNTSTI 212
               T   VI +V A D D+G    L+   + G  E  F+++ SG + +V  L        
Sbjct: 2277 NLETLPKVILQVVARDDDQGLNSKLTYVLVGGNEEGAFTLSASGELRLVQSLDREMKEQY 2336

Query: 213  QLVVVATDTGNP 224
             L++ A D+G+P
Sbjct: 2337 ILLITAADSGSP 2348



 Score = 48.1 bits (113), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 60/226 (26%), Positives = 92/226 (40%), Gaps = 35/226 (15%)

Query: 44   QFSKNEYSVSALENL-PVNYVLLTVTTNKPRDL--RVKYWLSND--YGERFSISRQGDIS 98
            +FS+  YS    E+  P + V   + T+    +   + Y +S D   G  F     G  +
Sbjct: 1846 KFSRPVYSFDIPEDATPGSLVAAILATDDDSGINGEITYTVSEDDEEGMFFLNPVTGVFN 1905

Query: 99   LMQCLDYETEDSYRFTVYATDTL-MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLA 157
            L + LDYE +  Y  TV A D     T+  V  +++++ND  P F    Y   L    + 
Sbjct: 1906 LTRALDYEAQQYYILTVRAEDGGGQFTTIRVYFNILDINDNPPVFSMTSYSTSL----ME 1961

Query: 158  DLTPGSVIGKVEAADGDKGDRVTLSLR---GPYEKMFSINDSGHISIV------------ 202
            +L+PGS I      D D G    LS     G     F I++SG +SI             
Sbjct: 1962 NLSPGSAILNFSVTDADDGSNSQLSFSIASGDSGGQFGIDNSGVLSIRQPLDRESQSFYS 2021

Query: 203  ------DLSALN----TSTIQLVVVATDTGNPPRQASVPAIMHFPE 238
                  D++ L     TST Q+ ++  D  + P     P + + PE
Sbjct: 2022 LVVQVHDMAPLPASRFTSTAQVSIILLDVNDSPPSFISPKVTYVPE 2067



 Score = 47.0 bits (110), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 50/183 (27%), Positives = 86/183 (46%), Gaps = 16/183 (8%)

Query: 56   ENLPVNYVLLTVTTNKPR---DLRVKYWLSNDYGERFSI-SRQGDISLMQCLDYETEDSY 111
            EN P++ ++       P    +  ++Y L    G +FSI S  G++ L   LD E   +Y
Sbjct: 2067 ENTPIDTIVFKAQATDPDSGPNSYIEYSLLRPLGNKFSIGSIDGEVRLTGELDREAVSNY 2126

Query: 112  RFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKV 168
              TV ATD     +++S  V + V+++ND +P F    Y++ +    L     G+ + +V
Sbjct: 2127 TLTVVATDKGQPSLSSSTDVVVIVLDINDNNPLFAQKLYKVEVGENTLT----GTDLIQV 2182

Query: 169  EAADGDKGDRVTLS---LRGPYEKMFSIND-SGHISIVD-LSALNTSTIQLVVVATDTGN 223
             A DGD+G    +    + G  +  F I+  +G I++   L      +  L V + D G+
Sbjct: 2183 FATDGDEGTNGQVRYAIVSGDADNEFRIDSVTGVITVAKPLDREKKPSYTLTVQSADRGS 2242

Query: 224  PPR 226
             PR
Sbjct: 2243 SPR 2245



 Score = 45.1 bits (105), Expect = 0.061,   Method: Compositional matrix adjust.
 Identities = 51/191 (26%), Positives = 85/191 (44%), Gaps = 16/191 (8%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGERFSIS-RQGDISLM 100
            F+  +Y  + LEN P    ++ +     +   +  + Y + +   + F I    G I+  
Sbjct: 3202 FNPEDYFPNVLENAPSGTTVIRLNATDADSGPNAVIAYAIQSSDSDLFVIDPNTGTITTQ 3261

Query: 101  QCLDYETEDSYRFTVYA---TDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLA 157
              LDYET+ SY   V A    D    + A+VNI +   N++ PRF    Y   +      
Sbjct: 3262 GFLDYETKQSYHLMVKAFNIPDEERCSFASVNIQLEGTNEYVPRFVSKLYYFEVSEA--- 3318

Query: 158  DLTPGSVIGKVEAAD---GDKGDRVTLSLRGPYEKMFSIND-SGHISIVD-LSALNTSTI 212
              + G+V+G+V A+D   G  G+   L+     +K F I++ SG I +   L       I
Sbjct: 3319 -ASKGTVVGEVFASDRDMGTDGEVHYLTFGNSRKKGFQIDEKSGQIYVSGPLDREKEERI 3377

Query: 213  QLVVVATDTGN 223
             L V+A + G+
Sbjct: 3378 SLKVLAKNFGS 3388



 Score = 43.9 bits (102), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 70/148 (47%), Gaps = 19/148 (12%)

Query: 95  GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPR--FRY-PQYE 148
           G I + +CLDYE    Y  TV A D     ++  A   I +++VND +PR  FRY P   
Sbjct: 271 GVIRIRECLDYEMRQQYSLTVQAMDRGVPALSGRAEALIRLLDVNDNEPRVKFRYFPATS 330

Query: 149 LFLPHIPLADLTPGSVIGKVEAADGD----KGDRVTLSLRGPYEKMFSINDSG--HISIV 202
            F      A   PG+V+  +  +D D     G+     L G  ++ F ++ S   ++S++
Sbjct: 331 RFASVDENA--APGTVVALLTVSDADSPAANGNISVSILAGNEQRHFEVHSSKVPNLSLI 388

Query: 203 DL-SALNTSTIQL----VVVATDTGNPP 225
            + +AL+   I      V VA + G PP
Sbjct: 389 KVAAALDRERIPAYNLTVAVADNYGAPP 416



 Score = 40.8 bits (94), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 42/143 (29%), Positives = 73/143 (51%), Gaps = 16/143 (11%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLR----VKYWLS--NDYGERFSI-SRQGD 96
            +FS++  SV+  E+  V  V+ TV+  + RD      ++Y +S  N+ G  F+I +  G 
Sbjct: 3096 EFSQSHMSVTIPESHSVGTVIRTVSA-QDRDAAMNGLIRYNISSGNEAG-IFAINTTTGT 3153

Query: 97   ISLMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
            ++L + LD+E    +   V ATD      T    V ++V++VND  P F     E + P+
Sbjct: 3154 LTLAKPLDFELCQKHELVVTATDGGWVSRTGYCRVTVNVIDVNDNSPAF---NPEDYFPN 3210

Query: 154  IPLADLTPGSVIGKVEAADGDKG 176
            + L +   G+ + ++ A D D G
Sbjct: 3211 V-LENAPSGTTVIRLNATDADSG 3232



 Score = 39.3 bits (90), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 46/161 (28%), Positives = 74/161 (45%), Gaps = 27/161 (16%)

Query: 87  ERFSISRQGDISLMQCLDYETEDSYRFTVYATDTLMT---TSATVNISVVNVNDWDPRFR 143
           E  S       S+   LD ET       + A D  +    + A + +++++VND  PRF 
Sbjct: 519 EGGSAGHAAGTSVSSGLDRETASQVVLNISARDQGVQPKFSYAQLVVTILDVNDNKPRFS 578

Query: 144 YPQ-YELFLPHIPLADLTP-GSVIGKVEAADGDKGDRVT-----------LSLRGPY--- 187
            P+ Y+     + LA+ +P G+ +  + A DGD GD  T           L++ GP    
Sbjct: 579 QPEGYQ-----VSLAENSPSGTELLVLSATDGDLGDNGTVRFSLQEAEPALAVVGPSSVT 633

Query: 188 -EKMFSIND-SGHIS-IVDLSALNTSTIQLVVVATDTGNPP 225
             ++F ++  SG +S I  L     +   L V+ATD G+PP
Sbjct: 634 PRRVFRLDPVSGKLSTISQLDREEQAHFSLQVLATDLGSPP 674



 Score = 38.5 bits (88), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 36/140 (25%), Positives = 67/140 (47%), Gaps = 12/140 (8%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTTNKPRDL--RVKYWL-SNDYGERFSISRQ-GDISL 99
            +F ++ +    +ENL    +L     ++   L  ++ Y +   +    FSI+R  G+I  
Sbjct: 2676 EFEQDPFVAEIMENLSPRKILTVAAVDRDSGLNGQLNYEIIEGNMENSFSINRATGEIRS 2735

Query: 100  MQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
            ++ LD E    Y  T+ A+D    L +T+  V I++++ ND  PRF     ++F   +P 
Sbjct: 2736 VRPLDREKLSQYTLTIKASDKGTPLQSTTVKVIINILDENDNAPRFS----QIFSASVP- 2790

Query: 157  ADLTPGSVIGKVEAADGDKG 176
             +   G  + +V  +D D G
Sbjct: 2791 ENAPLGFTVTRVTTSDEDIG 2810



 Score = 37.7 bits (86), Expect = 9.7,   Method: Compositional matrix adjust.
 Identities = 36/135 (26%), Positives = 63/135 (46%), Gaps = 8/135 (5%)

Query: 89   FSISRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYP 145
            FS+S  G ++  + +D E   ++  +V   D+    M+++ TV I V++ ND   + R  
Sbjct: 3566 FSLSTTGVLTTTREIDREQISNFYLSVITRDSGVPQMSSTGTVLIKVIDQNDNPSQPR-- 3623

Query: 146  QYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSGHISIVDLS 205
              E+F+ +    +L PG ++G V+  D D  D    SL      +FSI   G   +   +
Sbjct: 3624 TVEIFVHY--YGNLFPGGILGNVKPQDPDVLDSFQCSLTSGVTSLFSI-PGGTCDLHSQA 3680

Query: 206  ALNTSTIQLVVVATD 220
                 T  L V++ D
Sbjct: 3681 RSTDGTFDLAVLSND 3695


>gi|195325646|gb|ACF95731.1| protocadherin-7 [Mustela putorius furo]
          Length = 775

 Score = 68.2 bits (165), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 62/202 (30%), Positives = 92/202 (45%), Gaps = 21/202 (10%)

Query: 37  GTSLRELQFSKNEYSVSALENLPVNYV--LLTVTTNKPRDLRVKYWLSNDYGERFSIS-R 93
           G S+ E+ F +N        N+P   V  +L    +  ++  + Y L +     F+I   
Sbjct: 277 GQSVVEVYFPEN--------NIPGERVATVLATDADSGKNAEIAYSLDSSVMGIFAIDPD 328

Query: 94  QGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELF 150
            GDI +   LD E  D Y F V A D    ++  S TV + V + ND DP+F    +  +
Sbjct: 329 SGDILVNTVLDREQTDRYEFKVNAKDKGIPVLQGSTTVIVQVADKNDNDPKFMQDVFTFY 388

Query: 151 LPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSI-NDSGHI-SIVDLSAL 207
           +      +L P S +G V   D DKG    +SL       +FSI ND+G I S +     
Sbjct: 389 VKE----NLQPNSTVGMVTVMDADKGRNAEMSLYIEENSNIFSIGNDTGTIYSTMSFDRE 444

Query: 208 NTSTIQLVVVATDTGNPPRQAS 229
           + +T    V A D G+PPR A+
Sbjct: 445 HQTTYTFRVKAVDGGDPPRSAT 466



 Score = 46.6 bits (109), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 77/316 (24%), Positives = 136/316 (43%), Gaps = 46/316 (14%)

Query: 30  TLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVT---TNKPRDLRVKYWLSNDYG 86
           T+IV  A  +  + +F ++ ++    ENL  N  +  VT    +K R+  +  ++  +  
Sbjct: 365 TVIVQVADKNDNDPKFMQDVFTFYVKENLQPNSTVGMVTVMDADKGRNAEMSLYIEEN-S 423

Query: 87  ERFSISRQ-GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRF 142
             FSI    G I      D E + +Y F V A D      + +ATV++ V++ ND  P  
Sbjct: 424 NIFSIGNDTGTIYSTMSFDREHQTTYTFRVKAVDGGDPPRSATATVSLFVMDENDNAPTV 483

Query: 143 RYPQ---YELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIND- 195
             P+   Y L  P   +      +V+  V A D D G    L+   + G   K+F I+  
Sbjct: 484 TLPRNISYTLLPPSSNVR-----TVVATVLATDSDDGINADLNYSIVGGNPFKLFEIDST 538

Query: 196 SGHISIV-DLSALNTSTIQLVVVATDTGNPPRQASVPAIMHFPEA------IVQQASSKL 248
           SG +S+V  L+  +    +LVV   D+G P +  +    +   E+      I  Q +  L
Sbjct: 539 SGVVSLVGKLTQKHYGLHRLVVQVNDSGQPSQSTTTLVHVFVNESVSNATVIDSQIARSL 598

Query: 249 NSGTSSTVL-------------IILGVVLIVLGFVIILLILYIHKNKHTKN-NGPPGSSH 294
           ++  +  +              I++GVV  ++  ++I+LI+ + +   +KN NG      
Sbjct: 599 HTPLTQDIAGDPSYEISKQRLSIVIGVVAGIMTVILIILIVVMARYCRSKNKNGYEAGKK 658

Query: 295 SKNDSFLSNVILPEKH 310
              D F      P++H
Sbjct: 659 DHEDFF-----TPQQH 669



 Score = 42.4 bits (98), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 40/153 (26%), Positives = 69/153 (45%), Gaps = 26/153 (16%)

Query: 102 CLDYETEDSYRFTVY---ATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLAD 158
            LD E  DSY  T+      D   ++ A + + + +VND  PRF    YE  L      +
Sbjct: 6   ALDREQRDSYELTLRVRDGGDPPRSSQAILRVLITDVNDNSPRFEKSVYEADLAE----N 61

Query: 159 LTPGSVIGKVEAADGDKG---------DRVTLSLRGPYEKMFSIND-SGHISI---VDLS 205
             PG+ I ++ AAD D G            T S+R    ++  +++ SG +S+   +D  
Sbjct: 62  SAPGTPILQLRAADLDVGVNGQIEYVFGAATESVR----RLLRLDETSGWLSVLHRIDRE 117

Query: 206 ALNTSTIQLVVVATDTGNPPRQASVPAIMHFPE 238
            +N   ++  V+A D G PP+      +++  +
Sbjct: 118 EVN--QLRFTVMARDRGQPPKTDKATVVLNIKD 148


>gi|395839907|ref|XP_003792813.1| PREDICTED: protocadherin Fat 1 [Otolemur garnettii]
          Length = 4588

 Score = 68.2 bits (165), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 66/217 (30%), Positives = 108/217 (49%), Gaps = 18/217 (8%)

Query: 29   ATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTV-TTNKPRDL--RVKYWLSNDY 85
            A + V+  G +L    F +NEY V   EN P++ +++ V  T++   +  ++ Y + ND+
Sbjct: 2476 AQVHVTVIGGNLHSPVFVQNEYEVELAENAPLHTLVIEVKATDEDSGIYGQITYHIVNDF 2535

Query: 86   G-ERFSISRQGDISLMQCLDYET--EDSYRFTVYATDTLMTTS-ATVNISVVNVNDWDPR 141
              ERF  + QG +  ++ LD ET  E      + A DT    +  T+NI + + ND  P+
Sbjct: 2536 AKERFYTNEQGQVFTLEKLDRETPAEKVIPVRLMAKDTGGKVAFCTINIILTDDNDNAPQ 2595

Query: 142  FRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDR--VTLSLRGPYEKM---FSIND- 195
            FR  +YE+ +     +    G+ I KV A+D D+G    VT ++    E +     IN  
Sbjct: 2596 FRATKYEVNIG----SGAAKGASIIKVLASDADEGSNADVTYAIEADSESVKENLEINKL 2651

Query: 196  SGHISIVD-LSALNTSTIQLVVVATDTGNPPRQASVP 231
            SG I+  + L  L        V A D G+PP+++ VP
Sbjct: 2652 SGVITTKESLIGLENEFFTFFVRAMDNGSPPKESVVP 2688



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 60/201 (29%), Positives = 99/201 (49%), Gaps = 23/201 (11%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSN-DYGERFSIS-RQGDISLMQC 102
            F +  YS   +EN+ ++  ++ V  N P  L+V Y +++ D   +F+I+   G I+++  
Sbjct: 2182 FEQTFYSAEIVENVQMHSPVVHVQANSPEGLKVFYSITDGDPFSQFTINFNTGVINVIAP 2241

Query: 103  LDYETEDSYRFTVYATDTLMTTSATVNISVV--NVNDWDPRFRYPQYELFLPHIPLADLT 160
            LD+E+  +Y+ +V ATD+L    A V + +V  ++ND  P F +  Y         A L+
Sbjct: 2242 LDFESHPAYKLSVRATDSLTGAHAEVFVDIVVEDINDNPPVFAHQSY--------AATLS 2293

Query: 161  PGSVIG----KVEAADGDK--GDRVTLSLRGPYEK---MFSINDS-GHISIVD-LSALNT 209
              SVIG     V A D D      ++  + G + K    F I+ S G IS+V  L    +
Sbjct: 2294 EASVIGTSVVHVRATDSDSEPNRGISYHMFGNHSKSHDHFHIDSSTGLISLVRTLDFEQS 2353

Query: 210  STIQLVVVATDTGNPPRQASV 230
               ++ V A D G PP  + V
Sbjct: 2354 QQHKIFVRAVDGGMPPLSSDV 2374



 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 45/201 (22%), Positives = 91/201 (45%), Gaps = 30/201 (14%)

Query: 7    FLQPITLVVRAIQYDNQDRYALATL-------------------IVSKAGTSLRELQFSK 47
            F++P T VV + ++     Y + ++                    +S+   SL  + F +
Sbjct: 1301 FIEPKTGVVSSKKFSGAGEYDILSIKAVDNGRPQKSSTTRLHIEWISRPKPSLEPIAFEE 1360

Query: 48   NEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWL---SNDYGERFSISRQ-GDISLMQCL 103
            + ++ + +E+ PV +++  ++   P       W      ++   F + +  G I + + L
Sbjct: 1361 SFFTFTVMESDPVAHMIGVISVEPPS---TPLWFDITGGNFDSHFDVDKSTGTIIVAKPL 1417

Query: 104  DYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGS 163
            D E + +Y  TV ATD   T    V I V++ ND  P+F   +YE+ +P     D  P +
Sbjct: 1418 DAEQKSNYNLTVEATDGTTTILTQVFIKVIDTNDHRPQFATSKYEVTIPE----DTVPET 1473

Query: 164  VIGKVEAADGDKGDRVTLSLR 184
             I ++ A D D+ +++  +L+
Sbjct: 1474 EILQISAVDKDEKNKLIYTLQ 1494



 Score = 57.8 bits (138), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 70/239 (29%), Positives = 114/239 (47%), Gaps = 23/239 (9%)

Query: 5    DDFLQPI-TLVVRAIQYDNQDRY-ALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNY 62
            D  LQ + TL V+A+      R  A +++IVS    +     F   EY  +  E++ +  
Sbjct: 3188 DRELQAVYTLTVKAVDQGLPRRLTATSSVIVSVLDINDNPPVFEYREYGATVSEDILIGT 3247

Query: 63   VLLTVTTNKPRDLRVKYWLS------NDYGERFSI-SRQGDISLMQCLDYETEDSYRFTV 115
             +L V     RD+     ++      N++G +FSI S+ G I +++ LDYE+   Y  TV
Sbjct: 3248 EVLQVYA-ASRDIEANAEITYLIISGNEHG-KFSIDSKTGAIFIIENLDYESSHEYYLTV 3305

Query: 116  YATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAAD 172
             ATD     ++  ATVNI+V ++ND  P F    Y   +    + + +  +V+   + AD
Sbjct: 3306 EATDGGTPSLSDVATVNINVTDINDNTPVFSQDTYTTVISEDAILEQSVITVMA--DDAD 3363

Query: 173  GDKGDRVTLS-LRGPYEKMFSIND-SGHISIVDLSALNTSTIQ---LVVVATDTGNPPR 226
            G     +  S + G     F+I+   G + +  L  L+  TI    L V A+D G+PPR
Sbjct: 3364 GPSNSHIRYSIIDGNQGNPFTIDSVKGEVKVTRL--LDRETISGYTLTVQASDNGSPPR 3420



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 52/201 (25%), Positives = 98/201 (48%), Gaps = 20/201 (9%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTT----NKPRDLRVKYWLSN-DYGERFSISR---QG 95
            +F+   Y  +  E+ P   V+  ++T    ++  + +V Y+++  D   +F+I     + 
Sbjct: 2917 RFTAEIYKGTVSEDDPPGGVIAILSTTDADSEEINRQVTYFITGGDALRQFAIENIQNEW 2976

Query: 96   DISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIP 155
             + + + LD E +D+Y  T+ ATD   ++ A V + V++ ND  P      Y   +P   
Sbjct: 2977 KVYVKKPLDREQKDNYLLTITATDGTFSSKAIVEVKVLDANDNSPVCEKTLYSDTIPE-- 3034

Query: 156  LADLTPGSVIGKVEAADGD--KGDRVTLSLRGPYEKMFSIN-DSGHISIVDLSALN---T 209
              D  PG ++ ++ A D D      +T +L G   + F +N D+G + I  L+AL+    
Sbjct: 3035 --DALPGKLVMQISATDADIRSNAEITYTLFGSGAEKFKLNPDTGELKI--LTALDREHQ 3090

Query: 210  STIQLVVVATDTGNPPRQASV 230
            +   L+V ATD G    +A++
Sbjct: 3091 AVYNLLVKATDGGGRFCEANI 3111



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 60/236 (25%), Positives = 109/236 (46%), Gaps = 24/236 (10%)

Query: 4    EDDFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYV 63
            E++F    T  VRA+   +  + ++  + +      ++  +FS+  Y+ +  E++P+   
Sbjct: 2665 ENEFF---TFFVRAMDNGSPPKESVVPVYIKILPPEMQLPKFSEPFYTYTVSEDIPIGTE 2721

Query: 64   LLTVTTNKPRDLRVKYWLSN----DYGERFSISRQ-GDISLMQCLDYETEDSYRFTVYA- 117
            +  +       +       N    +  E F I RQ G + L + LD+ET   Y+F++ A 
Sbjct: 2722 IDVIHAEHSGTVLYSLIKGNTPESNRDEVFVIDRQSGRLKLEKGLDHETTKWYQFSILAR 2781

Query: 118  ---TDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGD 174
                D  +  S  V+I V + ND  P      YE F+    + +L  GS + ++ A+D D
Sbjct: 2782 CTHNDNEIVASVEVSIQVKDANDNSPVLESNPYEAFV----VENLPGGSRVIQIRASDLD 2837

Query: 175  KG--DRVTLSLRGPYE----KMFSIN-DSGHISIV-DLSALNTSTIQLVVVATDTG 222
             G   +VT SL         + F+IN ++G I+ + +L     +  Q+ VVA+D G
Sbjct: 2838 SGTNGQVTYSLDLSQSEEVIESFTINKETGWITTLKELDHEKRANYQIKVVASDHG 2893



 Score = 47.8 bits (112), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 58/215 (26%), Positives = 91/215 (42%), Gaps = 19/215 (8%)

Query: 24  DRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLR---VKYW 80
           DR A   ++V   G +    +FS+  Y  S  EN+P+   +++V+   P +     V Y 
Sbjct: 442 DRKASTKVLVKILGANSNPPEFSQTAYKASFDENVPIGTTIMSVSAEDPDEGENGYVTYS 501

Query: 81  LSNDYGERFSISR-QGDISLMQCLDYE-TEDSYRFTVYATDTLMTTSATVN----ISVVN 134
           ++N     F I    G +S+ + LDYE     Y   + A+D  +     V     I++ N
Sbjct: 502 IANLNHVPFVIDHFTGAVSISENLDYELMPRVYSLRIRASDWGLPYRREVEVLATITLNN 561

Query: 135 VNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYE-KMFSI 193
           +ND  P F     E  +P     DL  G  I  V A D D+   V   +    E  +FS+
Sbjct: 562 LNDNTPLFEKINCEGTIPR----DLGVGEQITTVSAIDADELQLVRYQIEAGNELNLFSL 617

Query: 194 NDSGHI-----SIVDLSALNTSTIQLVVVATDTGN 223
           N +  +     S++D      S   L + ATD  N
Sbjct: 618 NPTSGVLTLKQSLMDGLGSKVSFHSLRITATDGEN 652



 Score = 45.1 bits (105), Expect = 0.053,   Method: Compositional matrix adjust.
 Identities = 45/169 (26%), Positives = 78/169 (46%), Gaps = 18/169 (10%)

Query: 76   RVKYWLSNDYGERFSIS-RQGDISLMQCLDYETEDSYRFTVYATDTL-MTTSATVNISVV 133
             + Y L     E+F ++   G++ ++  LD E +  Y   V ATD       A + +++ 
Sbjct: 3057 EITYTLFGSGAEKFKLNPDTGELKILTALDREHQAVYNLLVKATDGGGRFCEANIVLTLE 3116

Query: 134  NVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMF 191
            +VND  P F    Y + +      +  PG+ + +V+A D D G   +++  L    +  F
Sbjct: 3117 DVNDNPPEFTADPYTIAV----FENTEPGTPLTRVQATDADAGLNQKISYLLMNSADGQF 3172

Query: 192  SIND-SGHISIV-----DLSALNTSTIQLVVVATDTGNPPRQASVPAIM 234
            SIN+ SG I +      +L A+ T    L V A D G P R  +  +++
Sbjct: 3173 SINELSGIIQLEKPLDRELQAVYT----LTVKAVDQGLPRRLTATSSVI 3217



 Score = 42.0 bits (97), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 47/194 (24%), Positives = 84/194 (43%), Gaps = 12/194 (6%)

Query: 12   TLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNY-VLLTVTTN 70
            TL V+A    +  R    T+ +  +  +     FS+  YS+   EN PV + VL  V T+
Sbjct: 3407 TLTVQASDNGSPPRVNTTTVNIDVSDVNDNAPAFSQENYSLIVQENKPVGFSVLQLVVTD 3466

Query: 71   KPRDLRVKYWL----SNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDT---LMT 123
            K        +     S +  + F + +QG +     +  + +D Y   V   D     ++
Sbjct: 3467 KDSSHNGPPFFFTIVSGNEDKAFEVDQQGVLLTSGAIKRKVKDHYLLHVKVADNGKPQLS 3526

Query: 124  TSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSL 183
            +   ++I V+  + + P       E+F+      +   G VIGK+ A D D  D +T SL
Sbjct: 3527 SLTYIDIRVIEESIYPPAIL--PLEIFI--TAFGEEYSGGVIGKIHATDQDVYDTLTYSL 3582

Query: 184  RGPYEKMFSINDSG 197
                + +FS++ +G
Sbjct: 3583 DPQMDSLFSVSSTG 3596



 Score = 40.8 bits (94), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 53/191 (27%), Positives = 85/191 (44%), Gaps = 30/191 (15%)

Query: 56   ENLPVNYVLLTVTTNKP---RDLRVKYWLSNDYG-ERFSISRQ-GDISLMQCLDYETEDS 110
            E++P+   ++TV+ +     RD  ++Y + +  G   F I  + G I     LD E+   
Sbjct: 1045 EDVPLGSSVMTVSAHDEDTGRDGEIRYSIRDGSGIGVFKIDEETGVIETCDRLDRESTSH 1104

Query: 111  YRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSV-IG 166
            Y  TVYA D     +++   V I V +VND  P+   P   ++ P +   + +P  V + 
Sbjct: 1105 YWLTVYAADQGVVPLSSFIEVYIEVEDVNDNAPQTSEP---VYYPEV--MENSPKDVSVV 1159

Query: 167  KVEAADGDKGDRVTLSLRGPYEKMFSINDSGHISIVDLSALNTSTIQ-----------LV 215
            ++EA D D      L       K+ S N  G  SI   + L T+T +           L 
Sbjct: 1160 QIEAFDPDSSSNDKLMY-----KITSGNPQGFFSIHPKTGLITTTSRKLDREQQDEHILE 1214

Query: 216  VVATDTGNPPR 226
            V  TD G+PP+
Sbjct: 1215 VTVTDNGSPPK 1225



 Score = 39.3 bits (90), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 37/128 (28%), Positives = 56/128 (43%), Gaps = 12/128 (9%)

Query: 92   SRQGDISLMQCLDYETEDSYRFTVYATDTLM---TTSATVNISVVNVNDWDPRFRYPQYE 148
            S  G ISL++ LD+E    ++  V A D  M   ++   V + V ++ND  P F    YE
Sbjct: 2337 SSTGLISLVRTLDFEQSQQHKIFVRAVDGGMPPLSSDVIVTVDVTDLNDNPPLFDRQIYE 2396

Query: 149  LFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSINDSGHISIVDLS 205
              +         PG  +  ++A D D  D   L    L G   K F I+      I+ LS
Sbjct: 2397 AKISE----HAAPGQFVTCMKAYDADSSDIDKLEYSILSGNDHKTFVID--SETGIITLS 2450

Query: 206  ALNTSTIQ 213
            +L   T++
Sbjct: 2451 SLRRHTLK 2458



 Score = 38.9 bits (89), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 51/205 (24%), Positives = 87/205 (42%), Gaps = 36/205 (17%)

Query: 44   QFSKNEYSVSALEN-LPVNYVLLTVTTNKPRDLRVKYWLSNDYG----ERFSIS-RQGDI 97
            QF+ ++Y V+  E+ +P   +L     +K    ++ Y L +       ++F +    G +
Sbjct: 1455 QFATSKYEVTIPEDTVPETEILQISAVDKDEKNKLIYTLQSSIDPLSLKKFRLDPATGSL 1514

Query: 98   SLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHI 154
               + LD+E    +  TV   D    +    A + ++V ++ND  P F    YE  +   
Sbjct: 1515 YTSEKLDHEAIHQHILTVMVRDQDVPVKRNFARIVVNVSDMNDHAPWFTSSSYEGRV--- 1571

Query: 155  PLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSGHI--------------S 200
                   GSV+ ++ A D DKG+          E ++SI +SG+I              +
Sbjct: 1572 -YESAAVGSVVLQITALDKDKGENA--------EVLYSI-ESGNIGNSFTIDPILGSIKT 1621

Query: 201  IVDLSALNTSTIQLVVVATDTGNPP 225
              +L   N     L+V ATD GNPP
Sbjct: 1622 AKELDRSNQVEYDLIVKATDKGNPP 1646


>gi|449504736|ref|XP_004176434.1| PREDICTED: LOW QUALITY PROTEIN: cadherin-23 [Taeniopygia guttata]
          Length = 3375

 Score = 68.2 bits (165), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 57/194 (29%), Positives = 89/194 (45%), Gaps = 18/194 (9%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDLR---VKYWLSNDYGERFSIS-RQGDISLM 100
            FS   Y  +  E++P+  V+L+VT       +   ++Y L +  G +F I+   GDI ++
Sbjct: 2413 FSHPSYQKAVFEDVPLGTVILSVTATDADSGQFALIQYSLGDGEG-KFGINPNTGDIYIL 2471

Query: 101  QCLDYETEDSYRFTVYATD-------TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
              LD E +D Y  T  A D            S  V I+V+++ND  P+F   Q+   +  
Sbjct: 2472 SALDREKKDHYTLTAVARDNPGDVSSNRRENSVQVLITVLDINDVRPQFSKSQFSTSV-- 2529

Query: 154  IPLADLTPGSVIGKVEAADGDKGDR--VTLSLRGPYEKMFSINDSGHISIVDLSALNTST 211
                +   G+ +  + A D D+GD   VT S+ GP  + F IN    +        +   
Sbjct: 2530 --YENEPAGTSVITMSATDLDEGDNGVVTYSIEGPGAEAFKINKDSGLVTSRRRLQSYER 2587

Query: 212  IQLVVVATDTGNPP 225
              L VVATD G+PP
Sbjct: 2588 FNLTVVATDKGHPP 2601



 Score = 58.5 bits (140), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 63/207 (30%), Positives = 98/207 (47%), Gaps = 22/207 (10%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRDL----RVKYWLSNDYGERFSISRQ-GDISL 99
           FSK  Y+VS  EN  V   +L V      D+    +V Y+ S+D  +RFS+ +  G I L
Sbjct: 471 FSKVLYNVSLFENTTVGTTVLQVHATD-NDVGTYGKVSYFFSDD-PDRFSLDKDTGVIIL 528

Query: 100 MQCLDYETEDSYRFTVYATDTL-MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLAD 158
              LD+ET   Y  TV A D     T+  V I+V++VND  P F   Q E +L  +   +
Sbjct: 529 TARLDFETTQRYTLTVIARDGGGEETTGRVRINVLDVNDNVPTF---QKEAYLGALRENE 585

Query: 159 LTPGSVIGKVEAADGDK--GDRVTLSL--RGPYEKMFSINDSGHISIV------DLSALN 208
            +   V+ ++ A+D D    ++++ S+     +   F I  S    ++      D   + 
Sbjct: 586 PSVTQVV-RLRASDEDSPPNNQISYSIVQASAFRDYFDITMSEGYGVIIVNHPLDYEQVA 644

Query: 209 TSTIQLVVVATDTGNPPRQASVPAIMH 235
              I L V+A D GNPP  ++VP  + 
Sbjct: 645 NGVIYLTVMAKDAGNPPLNSTVPVTIE 671



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 62/213 (29%), Positives = 92/213 (43%), Gaps = 34/213 (15%)

Query: 45  FSKNEYSVSALENLPVNY-VLLTVTTNKPRDLRVKYWLSNDYGER-----------FSI- 91
           FSK  Y ++ +E++     VL    T+  R        S +YG+            F I 
Sbjct: 682 FSKPSYVIAVMEDIMAGATVLFLNATDMDR--------SREYGQESIIYSLEGSSHFRIN 733

Query: 92  SRQGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFL 151
           +R G+I+    LD E +  Y   V A D  +       I++VN+   D    YP ++   
Sbjct: 734 ARSGEITTTSLLDREAKSEYILIVRAVDGGVGHHQKTGIAMVNITLLDINDNYPTWKDEP 793

Query: 152 PHIPLADLT-PGSVIGKVEAADGDKGDR--VTLSLRGPYEKMFSIND-SGHIS----IVD 203
             I L ++T P S +  V A D D G+   V  S+R P  K +S+N  +G I     ++D
Sbjct: 794 YFINLVEMTPPNSDVTTVVAVDPDLGENGTVVYSIRPP-NKFYSLNSTTGKIRTSGVLLD 852

Query: 204 LSALNTSTIQL----VVVATDTGNPPRQASVPA 232
               N    QL    VV  TD G PP +A+  A
Sbjct: 853 RENPNAQEAQLMRRIVVSVTDCGRPPLRATSSA 885



 Score = 47.8 bits (112), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 50/160 (31%), Positives = 78/160 (48%), Gaps = 16/160 (10%)

Query: 88   RFSIS-RQGDISLMQCLDYETEDSYRFTVYATDT-----LMTTSATVNISVVNVNDWDPR 141
            +FS+  R G +  +  LD ET  SY   + A D        T +ATV ++V++VND  P 
Sbjct: 1053 KFSVGFRDGVVRTVVSLDRETVASYTLILEAIDNGPSGNRRTGTATVYVTVLDVNDNRPI 1112

Query: 142  FRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSL-RGPYEKMFSINDSGH 198
            F    YE+ +P     D+   S I +V+A D D+G   RV   + +G     F IN S  
Sbjct: 1113 FLQSSYEVSVPE----DIPAASSIVQVKATDADEGINGRVWYRIVKGNEHNHFRINPSTG 1168

Query: 199  ISIVDLSALN---TSTIQLVVVATDTGNPPRQASVPAIMH 235
            + +  +  L+    S+  L V A +T   P ++SV  I++
Sbjct: 1169 LVMRGVRHLDREQNSSHVLEVEAYNTEQGPMRSSVRVIVY 1208



 Score = 47.8 bits (112), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 42/139 (30%), Positives = 67/139 (48%), Gaps = 12/139 (8%)

Query: 55   LENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGERFSI-SRQGDISLMQ-CLDYETED 109
            LEN P  + +L VT    +   + ++ Y +     +RF I +  G I +    +D E  D
Sbjct: 2090 LENSPPGFSVLQVTATDADSGLNQQLDYRIEGGGQDRFLIDATTGVIRVANITIDREERD 2149

Query: 110  SYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIG 166
            +YR TV A D     ++ +ATV+I + ++ND  P F  P   + +P        PG+V+ 
Sbjct: 2150 AYRLTVVAVDQGTPALSGTATVSIVIDDINDCRPEFINPIQTVSIPE----SAPPGTVVA 2205

Query: 167  KVEAADGDKGDRVTLSLRG 185
            +V A D D   R+   L G
Sbjct: 2206 EVTAIDRDLHPRLEYYLLG 2224



 Score = 42.7 bits (99), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 38/119 (31%), Positives = 57/119 (47%), Gaps = 11/119 (9%)

Query: 95   GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFL 151
            G +   + +DYE      FTV A+D      +    V + +V++ND +P F +P Y+  +
Sbjct: 2363 GKVVANRTVDYEEVQWLNFTVRASDNGSPRRSAEIPVYLQIVDINDNNPVFSHPSYQKAV 2422

Query: 152  PHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSIN-DSGHISIVDLSALN 208
                  D+  G+VI  V A D D G    +    G  E  F IN ++G I I  LSAL+
Sbjct: 2423 ----FEDVPLGTVILSVTATDADSGQFALIQYSLGDGEGKFGINPNTGDIYI--LSALD 2475



 Score = 42.0 bits (97), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 56/219 (25%), Positives = 95/219 (43%), Gaps = 41/219 (18%)

Query: 51   SVSALENLPVNYVLLTVTTNKPRDL--RVKYWLSN------------DYGERFSIS-RQG 95
            +VS  E+ P   V+  VT    RDL  R++Y+L              D    F++  R G
Sbjct: 2191 TVSIPESAPPGTVVAEVTAID-RDLHPRLEYYLLGIVARDDTDALVPDQQGAFTVDFRTG 2249

Query: 96   DISLMQCLDYETEDSYRFTVYATD--------TLMTTSATVNISVVNVNDWDPRFRYPQY 147
             + +   L+ E   +Y  T+   D        ++   +A + ++V++VND  PRFR    
Sbjct: 2250 AVKIKTPLNRELVATYEVTISVHDNASEVIDRSVSVPNAKLTVNVLDVNDNTPRFRPFGV 2309

Query: 148  ELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSGHISIVDLSA- 206
              F   I L   T G+ +  + A D DKG    ++    YE + +++  G+  + D SA 
Sbjct: 2310 TYFTERI-LEGATQGTTLISISAVDPDKGANGQIT----YE-LLNLSPEGYACLEDHSAG 2363

Query: 207  -------LNTSTIQ---LVVVATDTGNPPRQASVPAIMH 235
                   ++   +Q     V A+D G+P R A +P  + 
Sbjct: 2364 KVVANRTVDYEEVQWLNFTVRASDNGSPRRSAEIPVYLQ 2402



 Score = 42.0 bits (97), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 55/208 (26%), Positives = 91/208 (43%), Gaps = 28/208 (13%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGERFSISRQGDI--S 98
            QFSK+++S S  EN P    ++T++    ++  +  V Y +     E F I++   +  S
Sbjct: 2519 QFSKSQFSTSVYENEPAGTSVITMSATDLDEGDNGVVTYSIEGPGAEAFKINKDSGLVTS 2578

Query: 99   LMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFL---P 152
              +   YE    +  TV ATD     +  +  ++I V+++ND  P F  P     L    
Sbjct: 2579 RRRLQSYE---RFNLTVVATDKGHPPLWGTTMLHIEVIDINDNRPVFVRPPNGTILHIKE 2635

Query: 153  HIPLADLTPGSVIGKVEAADGDKG-------DRVTLSLRGPYEKMFSIND-SGHI-SIVD 203
             IPL      S + +V A D D+G       + +         + FSI+  SG I + + 
Sbjct: 2636 EIPLR-----SNVYEVYATDKDEGLNGVVLYNLLKTGAGNKDWEYFSIDSVSGLIQTAMR 2690

Query: 204  LSALNTSTIQLVVVATDTGNPPRQASVP 231
            L     +   L++VA D G PP +   P
Sbjct: 2691 LDREKQAVYNLIIVACDQGQPPYETMQP 2718



 Score = 41.6 bits (96), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 40/145 (27%), Positives = 66/145 (45%), Gaps = 21/145 (14%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTTNKPRD-----LRVKYWLSNDYGERFSI-SRQGDI 97
           QF    YSV   EN PV   +  V    P       +   +   + +   F+I S +G +
Sbjct: 144 QFHNQPYSVRIPENTPVGTPIFIVNATDPDQGAGGSVLYSFQPPSSF---FAIDSGRGIV 200

Query: 98  SLMQCLDYETEDSYRFTVYATD----TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
           ++++ LDYE   +Y+  V ATD      ++T A + + + +V D DP F      + LP+
Sbjct: 201 TVIRELDYEVTQAYQLQVNATDQDKNKPLSTLANLAVIITDVQDMDPIF------INLPY 254

Query: 154 IP--LADLTPGSVIGKVEAADGDKG 176
                 +  PG+ +  + A D DKG
Sbjct: 255 STNIYENSPPGTTVRMITAVDQDKG 279


>gi|357614377|gb|EHJ69044.1| cadherin-like protein [Danaus plexippus]
          Length = 3180

 Score = 68.2 bits (165), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 63/251 (25%), Positives = 112/251 (44%), Gaps = 34/251 (13%)

Query: 14  VVRAIQYDNQDRYALATLIVSKAGTSL---------------RELQFSKNEYSVSALENL 58
           ++R +  + QD Y L+ + +      L                   F +  Y  S  ENL
Sbjct: 506 LLRTLDREAQDEYTLSLVAMDTGSPPLTGSGTVKIIVQDVNDNSPDFQRQSYKTSVKENL 565

Query: 59  PVNYVLL---TVTTNKPRDLRVKYWLSNDYGERFSISR-QGDISLMQCLDYETEDSYRFT 114
           P    +L    +  +   + +++Y L  D  ERF I    G +     LD E  + Y   
Sbjct: 566 PPETEILHPKAIDKDIGNNAKIRYSLLGDKSERFRIDPVTGVVYTNATLDREEWEVYYLI 625

Query: 115 VYATDTLMT--TSATVNISVV--NVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEA 170
           + A D+  T   +AT N++++  + ND  P F    YE+++    +     G  +  V+A
Sbjct: 626 IMAQDSSTTDPRTATANLTIIVEDENDNTPTFPQSLYEVYISERTVQ----GDFVFGVKA 681

Query: 171 ADGDKGD--RVTLSLRGPYEKMFSIN-DSGHI----SIVDLSALNTSTIQLVVVATDTGN 223
            D D GD  ++   ++G +  +F+IN D+G I    +++       ST  L+++ATD+G 
Sbjct: 682 KDNDIGDNKKIVYDIKGEHHSLFTINKDTGVIKAKENLMKYKDKMRSTFNLIILATDSGT 741

Query: 224 PPRQASVPAIM 234
            PR++S   I+
Sbjct: 742 FPRESSAELIL 752



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 57/236 (24%), Positives = 107/236 (45%), Gaps = 32/236 (13%)

Query: 14   VVRAIQYDNQDRYAL---------------ATLIVSKAGTSLRELQFSKNEYSVSALENL 58
            ++R++ YD    Y L               AT+ +     +    QF++++Y     EN 
Sbjct: 1349 ILRSLDYDEIQEYRLNITAKDLGFKPKETTATVTIILTDINDNAPQFNQSQYVAYLTENS 1408

Query: 59   PVNYVLLTVTT---NKPRDLRVKYWLSNDYGERFSISRQ-GDISLMQCLDYETEDSYRFT 114
            P    +  V     + P++  +KY++ N+    FSI    GDI   +  D+E +  Y   
Sbjct: 1409 PAKSFIFKVKATDIDSPKNAIIKYYIKNEMSALFSIDENSGDIFSNEVFDFEEKTVYNLQ 1468

Query: 115  VYAT--DTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTP-GSVIGKVEAA 171
            + A   D++M ++A V + +  +N++ P+F  P +     H  +++    G+ +G ++A 
Sbjct: 1469 ILAENPDSVMQSTAEVIVYITGINEYYPKFIQPVF-----HFDVSESAEVGTNVGVIQAT 1523

Query: 172  DGDKGDR---VTLSLRGPYEKMFSIN-DSGHISIVD-LSALNTSTIQLVVVATDTG 222
            D D GD      L +    +K FSIN  +G I +   L     + + L V+A ++G
Sbjct: 1524 DQDSGDDGIIYYLLVGSSNDKGFSINSQTGVIRVARYLDRETQNRVVLTVLAKNSG 1579



 Score = 57.8 bits (138), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 60/229 (26%), Positives = 109/229 (47%), Gaps = 22/229 (9%)

Query: 13   LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTT--- 69
            ++V A+ +        +T++VS    +    +F++  +SV+  EN  +   ++ VT+   
Sbjct: 942  ILVEAVDHGIPQLVGTSTVLVSVLDKNDNPPRFTR-LFSVNVTENAEIGSFVIRVTSSDL 1000

Query: 70   NKPRDLRVKYWLSNDYGERFSISR-QGDISLMQCLDYETEDSYRFTVYATDTLMTTSATV 128
            +   +    Y    + GE+F I    G++++ + LD E +D Y   V A D    +   +
Sbjct: 1001 DTGPNANATYSFVENPGEKFVIDPISGNVTVAKPLDRELQDEYILKVAAIDGAWRSETPL 1060

Query: 129  NISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDR---VTLSLRG 185
             I++ + ND  P F Y  Y    P +   +    S +G+V A D DK      ++ SL+ 
Sbjct: 1061 TITIQDQNDNAPEFEYSYYSFNFPELQEKN----SFVGQVIATDKDKQGSNSIISYSLQQ 1116

Query: 186  PYEKMFSINDS-GHISIVDL-----SALNTS---TIQLVVVATDTGNPP 225
              + +FSI+ + G I    +     +++NTS   T  ++VVATD G PP
Sbjct: 1117 SSD-LFSIDPATGEIVTKFMMNYKRTSVNTSPENTYSVIVVATDNGKPP 1164



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 60/225 (26%), Positives = 99/225 (44%), Gaps = 35/225 (15%)

Query: 1   DINEDDFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVS------- 53
           D N D  +   T +VR  +  N +R +   L +        +++F   E S+S       
Sbjct: 382 DENRDFSISEDTGIVRVAKNLNFERKSRYILSIKAEDCGKDDIRFDTAELSISIQDINDN 441

Query: 54  ------------ALENL--PVNYVLLTVTT----NKPRDLRVKYWLSNDYGERFSI-SRQ 94
                        +EN+  P    +LTV      + P + +V+Y++     + F I +  
Sbjct: 442 PPTFLDTPYLAYVMENVIPPYGGYILTVQAYDADSPPFNNQVRYFIKEGDSDLFKINASS 501

Query: 95  GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFL 151
           G ISL++ LD E +D Y  ++ A DT    +T S TV I V +VND  P F+   Y+  +
Sbjct: 502 GQISLLRTLDREAQDEYTLSLVAMDTGSPPLTGSGTVKIIVQDVNDNSPDFQRQSYKTSV 561

Query: 152 PHIPLADLTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSIN 194
                 +L P + I   +A D D G+  ++  SL G   + F I+
Sbjct: 562 KE----NLPPETEILHPKAIDKDIGNNAKIRYSLLGDKSERFRID 602



 Score = 47.8 bits (112), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 54/197 (27%), Positives = 91/197 (46%), Gaps = 17/197 (8%)

Query: 15   VRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNK--- 71
            V+AI      ++   T+     G ++   +F+   Y V   EN P+   +L++       
Sbjct: 1260 VKAIDRGVPPQWDETTVTFVVTGENIYSPRFTALSYQVIVPENEPIGSPILSLDAKDEDE 1319

Query: 72   -PRDLRVKYWLSNDYGER-FSISR-QGDISLMQCLDYETEDSYRFTVYATDTLMT---TS 125
             P  + V+Y +++   E+ F +    G IS+++ LDY+    YR  + A D       T+
Sbjct: 1320 GPNGI-VRYTITSGNEEKEFKVDPVTGTISILRSLDYDEIQEYRLNITAKDLGFKPKETT 1378

Query: 126  ATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGD--KGDRVTLSL 183
            ATV I + ++ND  P+F   QY  +L     A     S I KV+A D D  K   +   +
Sbjct: 1379 ATVTIILTDINDNAPQFNQSQYVAYLTENSPAK----SFIFKVKATDIDSPKNAIIKYYI 1434

Query: 184  RGPYEKMFSIND-SGHI 199
            +     +FSI++ SG I
Sbjct: 1435 KNEMSALFSIDENSGDI 1451



 Score = 46.2 bits (108), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 55/204 (26%), Positives = 90/204 (44%), Gaps = 35/204 (17%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWL-SNDYGERFSISRQGDISLM 100
           F    +S   LE++PV   ++TV+    +   + ++ Y + S D  + F IS  G I   
Sbjct: 127 FDPMSFSNEILEDVPVGSSVVTVSATDIDSGFNGKLTYSIFSGDDNQDFKISSNGTIFTS 186

Query: 101 QCLDYETEDSYRFTVYATDTLM----TTSATVNISVV--NVNDWDPRFRYPQYELFLPHI 154
             LD ET   Y   + A D         SATV ++++  +VND  P F  P+      +I
Sbjct: 187 SLLDRETIPIYNLVITAKDLAKPPEPRLSATVQVTILLKDVNDMAPEFISPKTTAISENI 246

Query: 155 PLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSIND---SGHISIVDLSALNTST 211
           PL      +VI  V+A D D+G       R  Y + F   D    G+ ++ ++  +  +T
Sbjct: 247 PL-----NTVIMTVKAVDKDEG-------RNGYVEYFMAPDPEVDGYFTLGNVDGILRAT 294

Query: 212 IQL----------VVVATDTGNPP 225
            +L          ++ A D G+PP
Sbjct: 295 GKLDRELKSNFTILLTAKDRGDPP 318



 Score = 40.8 bits (94), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 58/201 (28%), Positives = 91/201 (45%), Gaps = 31/201 (15%)

Query: 50   YSVSALENLPVNYVLLTVTTNKPRDLRVKYWL----SNDYGERFSISRQ-GDISLMQCLD 104
            + VS    +  N  ++  T     D  + Y+L    SND G  FSI+ Q G I + + LD
Sbjct: 1505 FDVSESAEVGTNVGVIQATDQDSGDDGIIYYLLVGSSNDKG--FSINSQTGVIRVARYLD 1562

Query: 105  YETEDSYRFTVYATDTLM-----TTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADL 159
             ET++    TV A ++       T  A V IS+ + ND  P F    YE        A +
Sbjct: 1563 RETQNRVVLTVLAKNSGGIHGNDTDEAQVIISIQDGND-PPEFLRNYYE--------ATI 1613

Query: 160  TPGSVIG----KVEAADGD---KGDRVTLSL-RGPYEKMFSIN-DSGHISIV-DLSALNT 209
            + G+ +G    +V+A D D   + ++ + S+  G   + F I+   G I +  +L     
Sbjct: 1614 SEGAQVGEEVIQVKAVDKDVRSQNNQFSFSIIDGNLNQDFKIDPQGGSIEVARNLDREKV 1673

Query: 210  STIQLVVVATDTGNPPRQASV 230
            ST  L++ A DTG PP   + 
Sbjct: 1674 STYSLIIGAIDTGVPPETGTA 1694



 Score = 40.4 bits (93), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 41/134 (30%), Positives = 64/134 (47%), Gaps = 12/134 (8%)

Query: 76   RVKYWLSNDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATD---TLMTTSATVNIS 131
            R+ Y L NDY E F+I S  G+I     LD E+   Y   V A D     +  ++TV +S
Sbjct: 904  RISYRLVNDYEETFAIDSDSGEIFTNIALDRESIPFYEILVEAVDHGIPQLVGTSTVLVS 963

Query: 132  VVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYE 188
            V++ ND  PRF      LF  ++   +   GS + +V ++D D G     +   +  P E
Sbjct: 964  VLDKNDNPPRFT----RLFSVNV-TENAEIGSFVIRVTSSDLDTGPNANATYSFVENPGE 1018

Query: 189  KMFSINDSGHISIV 202
            K      SG++++ 
Sbjct: 1019 KFVIDPISGNVTVA 1032


>gi|195575605|ref|XP_002077668.1| GD22944 [Drosophila simulans]
 gi|194189677|gb|EDX03253.1| GD22944 [Drosophila simulans]
          Length = 3038

 Score = 68.2 bits (165), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 65/214 (30%), Positives = 94/214 (43%), Gaps = 27/214 (12%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWL-------------SNDYGER 88
            F K EYSV+  E+  +N  ++ V     +   + R+ Y +             S+D  + 
Sbjct: 1036 FEKEEYSVNVSESRSINAQIIQVNASDLDTGNNARITYRIVDAGVDNVTNSISSSDVSQH 1095

Query: 89   FSI-SRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRY 144
            F I    G I L   LD E  D Y+ TV ATD           V + V++ ND DP+F+ 
Sbjct: 1096 FGIFPNSGWIYLRAPLDREARDRYQLTVLATDNGTPAAHAKTRVIVRVLDANDNDPKFQK 1155

Query: 145  PQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRG-PYEKMFSIND-SGHISIV 202
             +YE  +      +L  GSV+G V A+D D G+   +     P    F ++  +G IS  
Sbjct: 1156 SKYEFRIEE----NLRRGSVVGVVTASDLDLGENAAIRYSLLPINSSFQVHPVTGEISTR 1211

Query: 203  D-LSALNTSTIQLVVVATDTGNPPRQASVPAIMH 235
            + L         LVV A D G P R A VP  +H
Sbjct: 1212 EPLDRELRELYDLVVEARDQGTPVRSARVPVRIH 1245



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 67/211 (31%), Positives = 104/211 (49%), Gaps = 17/211 (8%)

Query: 29  ATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGER 88
           AT++V+    +  E  F ++ Y+VS  EN PV   +L V+ + P D  V   ++   GE 
Sbjct: 595 ATVLVTIHDVNDNEPIFDQSFYNVSVAENEPVGRCILKVSASDP-DCGVNAMVNYTIGEG 653

Query: 89  FS-------ISRQGDISLMQCLDYETEDSYRFTVYATDT-LMTTSATVNISVVNVNDWDP 140
           F         S  G+I +   LD+E   SY F V ATD   ++T+A + + + +VND  P
Sbjct: 654 FKHLTEFEVRSASGEICIAGELDFERRSSYEFPVLATDRGGLSTTAMIKMQLTDVNDNRP 713

Query: 141 RFRYPQYELFLPHIPLADLTPGSV-IGKVEAADGDKGDRVTLSLR---GPYEKMFSINDS 196
            F   +Y++ L   P A     S  I  V A D D G+   +S R   G    +F I+ S
Sbjct: 714 VFYPREYKVSLRESPKAPSQASSTPIVAVVATDPDYGNFGQVSYRIVAGNEAGIFRIDRS 773

Query: 197 -GHISIV--DLSALNTSTIQLV-VVATDTGN 223
            G I +V  D+ ++ T  + ++ + ATD GN
Sbjct: 774 TGEIFVVRPDMLSVRTQPMHMLNISATDGGN 804



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 61/201 (30%), Positives = 104/201 (51%), Gaps = 21/201 (10%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGERFSI-SRQGDISL 99
            +F  ++Y+ S  E+ P+   ++ ++    +   + R+ Y L+N+   +F+I S+ G I+ 
Sbjct: 1968 RFKLSKYTGSVQEDAPLGTSVVQISAVDADLGVNARLVYSLANETQWQFAIDSQSGLITT 2027

Query: 100  MQCLDYETEDSYRFTVYATD----TLMTTSATVNISVVNVNDWDPRF-RYPQYELFLPHI 154
            +  LD E + SY F V ATD     + + +  V I+V+++ND  P F RYP    ++  +
Sbjct: 2028 VGKLDRELQASYNFMVLATDGGRYEVRSATVPVQINVLDINDNRPVFERYP----YIGQV 2083

Query: 155  PLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKM---FSINDS-GHISIVD-LSAL 207
            P A + PG  + KV+A D D G    +  SL      +   F IN S G +S    L++ 
Sbjct: 2084 P-ALIQPGQTLLKVQALDADLGANAEIVYSLNAENSAVSAKFRINPSTGALSASQSLASE 2142

Query: 208  NTSTIQLVVVATDTGNPPRQA 228
            +   + L VVA D G PP+ +
Sbjct: 2143 SGKLLHLEVVARDKGTPPQSS 2163



 Score = 45.4 bits (106), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 59/207 (28%), Positives = 94/207 (45%), Gaps = 27/207 (13%)

Query: 45  FSKNEYSVSALENLPVNYVLLTV---TTNKPRDLRVKYWLS---NDYGERFSIS-RQGDI 97
           F+++ Y  +  EN  V   +L V    T+   +  V+Y ++   +D  + F I  R G I
Sbjct: 286 FNQSRYFATVPENATVGTSVLQVYASDTDADENGLVEYAINRRQSDKEQMFRIDPRTGAI 345

Query: 98  SLMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFL--- 151
            + + LD+ET++ +   V A D     + T+A V+I V +VND  P        +FL   
Sbjct: 346 YINKALDFETKELHELVVVAKDHGEQPLETTAFVSIRVTDVNDNQPTINV----IFLSDD 401

Query: 152 --PHIPLADLTPGSVIGKVEAADGDKGDR-----VTLSLRGPYEKMFSINDSGHISIVDL 204
             P I  +   PG  + ++   D D         VTL+    +  + + ++S ++ IV L
Sbjct: 402 ASPKISES-AQPGEFVARISVHDPDSKTEYANVNVTLNGGDGHFALTTRDNSIYLVIVHL 460

Query: 205 SALN--TSTIQLVVVATDTGNPPRQAS 229
                  S   L VVATD G PP  AS
Sbjct: 461 PLDREIVSNYTLSVVATDKGTPPLHAS 487



 Score = 44.7 bits (104), Expect = 0.077,   Method: Compositional matrix adjust.
 Identities = 56/209 (26%), Positives = 88/209 (42%), Gaps = 39/209 (18%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGERFSISRQ--------- 94
            +F K++Y     ENL    V+  VT +   DL        D GE  +I            
Sbjct: 1152 KFQKSKYEFRIEENLRRGSVVGVVTAS---DL--------DLGENAAIRYSLLPINSSFQ 1200

Query: 95   -----GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQ 146
                 G+IS  + LD E  + Y   V A D    + +    V I V +VND  P    PQ
Sbjct: 1201 VHPVTGEISTREPLDRELRELYDLVVEARDQGTPVRSARVPVRIHVSDVNDNAPEIADPQ 1260

Query: 147  YELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRG---PYEKMFSINDSGHI- 199
             ++        +  PG+ + +V A D D G   +++   ++G       +FSI+ +  + 
Sbjct: 1261 EDVVSVR---EEQPPGTEVVRVRAVDRDHGQNASITYSIVKGRDSDGHGLFSIDPTSGVI 1317

Query: 200  -SIVDLSALNTSTIQLVVVATDTGNPPRQ 227
             + V L     S  +L V A+D G+PPR+
Sbjct: 1318 RTRVVLDHEERSIYRLGVAASDGGSPPRE 1346



 Score = 43.9 bits (102), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 49/160 (30%), Positives = 72/160 (45%), Gaps = 29/160 (18%)

Query: 95   GDISLMQCLDYETEDSYRFTVYATDT------LMTTSATVNISVVNVNDWDPRFRYPQ-- 146
            G +SL   LD+E    Y   V A D        + TS TV + V++ ND  P+F  P   
Sbjct: 1566 GALSLQAPLDFEAVQEYLLIVQALDQSSNVTERLQTSVTVRLQVLDANDNAPQFVSPNSS 1625

Query: 147  ----YELFLPHIPLADLTP-GSVIGKVEAADGDKGD--RVTLSLRGPY-EKMFSIN-DSG 197
                  LF     ++D T  G V+  + A D D GD  R+T  + G   E  F IN  +G
Sbjct: 1626 GGKTASLF-----ISDATRIGEVVAHIVAVDEDSGDNGRLTYEITGGNGEGRFRINSQTG 1680

Query: 198  HISIVDLSALNTSTIQ------LVVVATDTGNP-PRQASV 230
             I +V      T  ++      L++ A D G P P+++S+
Sbjct: 1681 IIELVKSLPPATEDVEKGGRFNLIITAKDHGQPEPKKSSL 1720



 Score = 43.9 bits (102), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 41/122 (33%), Positives = 59/122 (48%), Gaps = 16/122 (13%)

Query: 74   DLRVKYWL---SNDYGER-FSISRQ-GDISLMQCLDYETEDSYRFTVYATDTLMT----- 123
            DLRV Y L   + D  E  F I R  G++ + + LD E +  +R  + A DT  T     
Sbjct: 1426 DLRVTYTLNPLTKDLIEAAFDIDRHSGNLVVARLLDREVQSEFRLEIRALDTTATNNPQS 1485

Query: 124  TSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTP-GSVIGKVEAADGDKGDRVTLS 182
            ++ TV I V +VND  P   +PQ  + L    +++ TP G++I    A D D G    L 
Sbjct: 1486 SAITVKIEVADVNDNAP--EWPQDPIDL---QVSEATPVGTIIHNFTATDADTGTNGDLQ 1540

Query: 183  LR 184
             R
Sbjct: 1541 YR 1542



 Score = 42.7 bits (99), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 52/186 (27%), Positives = 81/186 (43%), Gaps = 26/186 (13%)

Query: 76   RVKYWLSNDYGER-FSI-SRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNI 130
            +V Y L  D G+  F+I +R G + L Q LDYE+   +   V ATD     ++T+ T+ +
Sbjct: 965  QVTYSLVKDSGKGLFAIDARSGHLILSQHLDYESSQRHTLIVTATDGGVPSLSTNLTILV 1024

Query: 131  SVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR------ 184
             V +VND  P F   +Y + +        +  + I +V A+D D G+   ++ R      
Sbjct: 1025 DVQDVNDNPPVFEKEEYSVNVSE----SRSINAQIIQVNASDLDTGNNARITYRIVDAGV 1080

Query: 185  ---------GPYEKMFSI-NDSGHISI-VDLSALNTSTIQLVVVATDTGNPPRQASVPAI 233
                         + F I  +SG I +   L        QL V+ATD G P   A    I
Sbjct: 1081 DNVTNSISSSDVSQHFGIFPNSGWIYLRAPLDREARDRYQLTVLATDNGTPAAHAKTRVI 1140

Query: 234  MHFPEA 239
            +   +A
Sbjct: 1141 VRVLDA 1146



 Score = 41.6 bits (96), Expect = 0.71,   Method: Compositional matrix adjust.
 Identities = 55/192 (28%), Positives = 90/192 (46%), Gaps = 16/192 (8%)

Query: 45   FSKNEYSVSALENLPVNYVLLTV---TTNKPRDLRVKYWL-SNDYGERFSI-SRQGDISL 99
            F K  Y+    E++P   V+ +V   + +      V+Y + S D    FSI +  G+I +
Sbjct: 827  FEKARYNYYVKEDIPRGTVVGSVIAASGDAAHRSPVRYSIYSGDPDGYFSIETNSGNIRI 886

Query: 100  MQCLDYETEDSYRFTVYAT--DTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLA 157
             + LD+E +      + AT  +  +     VNI V +VND  P F      + +P    A
Sbjct: 887  AKPLDHEAKSQVLLNIQATLGEPPVYGHTQVNIEVEDVNDNAPEFEASMVRISVPE--SA 944

Query: 158  DLTPGSVIGKVEAADGDKGD--RVTLSL-RGPYEKMFSIN-DSGHISIVD-LSALNTSTI 212
            +L  G+ +    A D D G   +VT SL +   + +F+I+  SGH+ +   L   ++   
Sbjct: 945  EL--GAPLYAAHAHDKDSGSSGQVTYSLVKDSGKGLFAIDARSGHLILSQHLDYESSQRH 1002

Query: 213  QLVVVATDTGNP 224
             L+V ATD G P
Sbjct: 1003 TLIVTATDGGVP 1014



 Score = 38.9 bits (89), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 62/220 (28%), Positives = 89/220 (40%), Gaps = 47/220 (21%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTT-------NKPRDLRVKYWLSNDYGERFSISRQ-G 95
            +F +  Y  + LEN+P    +L VT        N      +   ++ND    F +  Q G
Sbjct: 1735 RFLQAVYRATILENVPSGSFVLQVTAKSLHGAENANLSYEIPGGVANDL---FHVDWQRG 1791

Query: 96   DISLMQCLDYETEDSYRFTVY-------------------ATDTLMTTS-------ATVN 129
             I+     D E++ SY   VY                   ++D++  TS       AT+ 
Sbjct: 1792 IITTRGQFDRESQASYVLPVYVRDANRLSTLSSSAVRKQRSSDSIGDTSNGQHFDVATIY 1851

Query: 130  ISVVNVNDWDPRFRYPQ-YELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR---G 185
            I+V +VND  P FR    Y L +P     +  PG VI  V A+D D+G    L      G
Sbjct: 1852 ITVGDVNDNSPEFRPGSCYGLSVPE----NSEPG-VIHTVVASDLDEGPNADLIYSITGG 1906

Query: 186  PYEKMFSIND-SGHISIVDLSALNTSTIQLVVVATDTGNP 224
                 FSI+  SG +S   L     S   L + A+D G P
Sbjct: 1907 NLGNKFSIDSRSGELSARPLDREQNSRYTLQIQASDRGQP 1946



 Score = 38.5 bits (88), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 28/99 (28%), Positives = 42/99 (42%), Gaps = 5/99 (5%)

Query: 92   SRQGDISLMQCLDYETEDSYRFTVYATDTL-MTTSATVNISVVNVNDWDPRFRYPQYELF 150
            S  G ++     DYE    Y   + A+D      S  V + + + +++ P+F    Y   
Sbjct: 2935 SESGLVTSAFVFDYEQRQRYDMELLASDMGGKKASVAVRVEIESRDEFTPQFTERTYRFV 2994

Query: 151  LPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPY 187
            LP      L  G V+G+V A D D G   RV   L  P+
Sbjct: 2995 LP--AAVALPQGYVVGQVTATDSDSGPDGRVVYQLSAPH 3031



 Score = 38.1 bits (87), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 41/140 (29%), Positives = 63/140 (45%), Gaps = 14/140 (10%)

Query: 96  DISLMQCLDYETEDSYRFTVYATDTL---MTTSATVNISVVNVNDWDPRFRYPQYELFLP 152
           D+ +   LD ET   Y   + A D     +    TVNI++ +VND  P F   +Y   +P
Sbjct: 237 DLQISGFLDRETTPGYSLLIEALDGGTPPLRGFMTVNITIQDVNDNQPIFNQSRYFATVP 296

Query: 153 HIPLADLTPGSVIGKVEAADGDKGDRVTLSL-----RGPYEKMFSIN-DSGHISIVDLSA 206
                + T G+ + +V A+D D  +   +       +   E+MF I+  +G I I     
Sbjct: 297 E----NATVGTSVLQVYASDTDADENGLVEYAINRRQSDKEQMFRIDPRTGAIYINKALD 352

Query: 207 LNTSTI-QLVVVATDTGNPP 225
             T  + +LVVVA D G  P
Sbjct: 353 FETKELHELVVVAKDHGEQP 372


>gi|348582944|ref|XP_003477236.1| PREDICTED: protocadherin gamma-C4-like [Cavia porcellus]
          Length = 869

 Score = 68.2 bits (165), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 65/230 (28%), Positives = 101/230 (43%), Gaps = 22/230 (9%)

Query: 13  LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKP 72
           LV+ A+   N  R   A L VS    +     F +  Y +S LE+ P   VL+ +  + P
Sbjct: 210 LVLTAVDGGNPPRSGTAELRVSVLDVNDNAPAFQQASYRISVLESAPAGMVLIQLNASDP 269

Query: 73  RDL----RVKYWLSNDYGER----FSI-SRQGDISLMQCLDYETEDSYRFTVYATD---T 120
            DL     V +  S    +R    FS+    G ++L   LD+E+E+ Y F V A D    
Sbjct: 270 -DLGPSGNVTFSFSGHTPDRVRNLFSLHPTTGKLTLQGPLDFESENYYEFDVRARDGGSP 328

Query: 121 LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVT 180
            M    ++ + +++VND  P          LP        PG+V+  +   D D G    
Sbjct: 329 AMEQHCSLRVDLLDVNDNAPHITVTSELGTLPE----SAEPGTVVALISVQDPDSGSNGD 384

Query: 181 LSLRGPYEKMFSINDS--GHISIVDLSALN---TSTIQLVVVATDTGNPP 225
           +SLR P    F++  +     S+V    L+    S+  ++V A+D GNPP
Sbjct: 385 VSLRIPDHLPFALKSAFRNQFSLVTAGPLDRETKSSYDIMVTASDAGNPP 434



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 46/169 (27%), Positives = 79/169 (46%), Gaps = 27/169 (15%)

Query: 77  VKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVV 133
           + + L + +  +FS+   G       LD ET+ SY   V A+D     ++T  T+ +++ 
Sbjct: 393 LPFALKSAFRNQFSLVTAGP------LDRETKSSYDIMVTASDAGNPPLSTHRTIFLNIS 446

Query: 134 NVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMF 191
           +VND  P F    +E+F+P     +  PG ++  + A+D D G    ++ SL  P  +  
Sbjct: 447 DVNDNPPSFFQRSHEVFVPE----NNRPGDLLCSLAASDPDSGLNALISYSLLEPRNR-- 500

Query: 192 SINDSGHISIVDLSAL----------NTSTIQLVVVATDTGNPPRQASV 230
            ++ S  IS+   +             T T+Q  V A D GNPP  ++V
Sbjct: 501 DVSASSFISLNPQTGAVHATRSFDYEQTQTLQFEVQARDRGNPPLSSTV 549



 Score = 43.1 bits (100), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 48/190 (25%), Positives = 83/190 (43%), Gaps = 15/190 (7%)

Query: 95  GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYE--L 149
           G +   +  DYE   + +F V A D     ++++ TV + V+++ND  P    P+     
Sbjct: 515 GAVHATRSFDYEQTQTLQFEVQARDRGNPPLSSTVTVRLFVLDLNDNAPAVLRPRARPGS 574

Query: 150 FLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIND-SGHISIVDLS 205
             P      +  G ++ KV A D D G    +S   L  P   +F+++  +G +      
Sbjct: 575 LCPQALPPSVGAGHLVTKVTAVDLDSGYNAWVSYQLLEAPDPSLFAVSRYAGEVRTAVPI 634

Query: 206 ALNTSTIQLVVVATDTGNPPRQASVPAIMHFPE---AIVQ--QASSKLNSGTSSTVLIIL 260
             +    +LV+V  D+G+PP   SV  ++   E    +V   + SS    G S   L  L
Sbjct: 635 PADLPPQKLVIVVKDSGSPPLSTSVTLLVSLEEDTHPVVPDLRESSAPREGESRLTL-YL 693

Query: 261 GVVLIVLGFV 270
            + L+ + FV
Sbjct: 694 AMSLVAICFV 703


>gi|326664295|ref|XP_002660608.2| PREDICTED: protocadherin Fat 1 [Danio rerio]
          Length = 960

 Score = 68.2 bits (165), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 74/227 (32%), Positives = 109/227 (48%), Gaps = 14/227 (6%)

Query: 8   LQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVN-YVLLT 66
           +  ITL ++A Q ++  + A A + V          +F + EY +S  EN P + +VL T
Sbjct: 209 IDQITLYIQAAQQNDPSKTANAVVSVIIEDVDDNSPKFDQEEYIISIPENSPKDQFVLQT 268

Query: 67  VTTNKPRDLRVKYWLSNDYGERFSISRQGDISLMQ--CLDYETEDSYRFTVYATDT---L 121
           + T+   D   K     D  + F I+ QG ISL +   LD ET D Y   V A D     
Sbjct: 269 IVTDLDLDGFSKGHFIMD-SDTFVINSQGVISLGRDATLDRETNDHYTLEVVAVDQPVDG 327

Query: 122 MTTSATVNISVVNVNDWDPRFRYPQYELF-LPHIPLADLTPGSVIGKVEAADGDKGDR-- 178
           + ++A V I+V+++ND +P+F  P  EL  +        +PG V  K+ A D D GD   
Sbjct: 328 LRSTAQVIITVLDINDNNPQF-LPLPELIEIQEGKYTQSSPGEVC-KISATDADIGDNGL 385

Query: 179 VTLSLRGPYEKMFSINDSGHI-SIVDLSALNTSTIQLVVVATDTGNP 224
           VT S    Y K FS +D G + +I +L         +V+ A D G P
Sbjct: 386 VTFSTSS-YSKFFSCSDDGTLQAISELDREMQDVYDVVITAVDHGIP 431



 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 56/203 (27%), Positives = 96/203 (47%), Gaps = 24/203 (11%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTN----KPRDLRVKYWLSNDYGERFSISRQGDISLM 100
           F    YS +  E  PV+  ++ V  N     P + R+ Y +     E F +   G+I L+
Sbjct: 33  FENKTYSATISETTPVDTDVIRVKANDADASPENNRISYSIVPPAPEDFDVRSDGNIRLL 92

Query: 101 QCLDYETEDSYRFTVYATDT-LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL--- 156
           + L+Y     Y FTV A DT  ++ +  V I++V+ ++ +P F +  Y+  +    +   
Sbjct: 93  KHLNYNNIQQYTFTVKAQDTGGLSDTTAVTITIVDYDNLNPYFDHSLYKATIEENEIGHF 152

Query: 157 ADLTPGSVIGKVEAADGDKGDR------VTLSLRGPYEKMFSIN-DSGHISIVDLSALNT 209
           +D+TP +    ++A DGD G        +T  L   Y+  F IN +SG IS+   +AL+ 
Sbjct: 153 SDVTPEA----IKAQDGDTGINEPVVYSLTTVLPNEYQSNFEINPNSGVISVT--TALDR 206

Query: 210 STIQ---LVVVATDTGNPPRQAS 229
             I    L + A    +P + A+
Sbjct: 207 EEIDQITLYIQAAQQNDPSKTAN 229



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 45/159 (28%), Positives = 72/159 (45%), Gaps = 10/159 (6%)

Query: 85  YGERFSISRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPR 141
           Y + FS S  G +  +  LD E +D Y   + A D     +    TV +S+ +VND  P 
Sbjct: 393 YSKFFSCSDDGTLQAISELDREMQDVYDVVITAVDHGIPQLNNMTTVRVSITDVNDNAPV 452

Query: 142 FRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSIN-DSGHI 199
           F     E +   I + D   G ++  V A D D GD   ++        M +++ ++G I
Sbjct: 453 F---SSETYSRSILVRDAKVGELLLTVSATDRDAGDNALITYSFSEVSSMVALDAETGDI 509

Query: 200 SIV-DLSALNTSTI-QLVVVATDTGNPPRQASVPAIMHF 236
           ++  DLS +   T+  L  +ATD G P        ++HF
Sbjct: 510 TLTSDLSEVTEDTLLTLSAIATDHGTPALSDEAEVLIHF 548


>gi|347543907|gb|AEP02526.1| CDH23, partial [Myotis altarium]
          Length = 3209

 Score = 68.2 bits (165), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 62/195 (31%), Positives = 93/195 (47%), Gaps = 20/195 (10%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDLR---VKYWLSNDYGERFSIS-RQGDISLM 100
            F +  Y  +  E++PV  V+LTVT +         ++Y L +  G +F+I+   GDI ++
Sbjct: 2392 FDEPSYQEAVYEDVPVGTVILTVTASDADSGNFAVIEYSLVDGEG-KFAINPTTGDIYVL 2450

Query: 101  QCLDYETEDSYRFTVYATD-------TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
              LD E +D Y  T  A D            S  V I V++VND  P+F  PQ+   +  
Sbjct: 2451 SSLDREKKDHYILTALAKDNPGDVASNRRENSVQVVIQVLDVNDCRPQFSKPQFSTSV-- 2508

Query: 154  IPLADLTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSIN-DSGHISIVDLSALNTS 210
                +   G+ +  + A D D+G    VT SL GP E+ F ++ DSG ++       +  
Sbjct: 2509 --YENEPAGTSVITMMATDQDEGSNGEVTYSLEGPGEEAFHVDIDSGLVT-TKRPLHSYE 2565

Query: 211  TIQLVVVATDTGNPP 225
               L VVATD G PP
Sbjct: 2566 RFNLTVVATDGGEPP 2580



 Score = 51.6 bits (122), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 64/210 (30%), Positives = 97/210 (46%), Gaps = 28/210 (13%)

Query: 45  FSKNEYSVSALENLPVNYVLLTV--TTNKPRDL-RVKYWLSNDYGERFSISRQ-GDISLM 100
           FS+  Y+VS  EN+ V   +LTV  T N       V Y+ S+D  +RFS+ +  G I L+
Sbjct: 450 FSQPLYNVSLYENVTVGTSVLTVLATDNDVGTFGEVSYFFSDD-PDRFSLDKDTGLIMLI 508

Query: 101 QCLDYETEDSYRFTVYATDTL-MTTSATVNISVVNVNDWDPRFRYPQYELFL----PHIP 155
             LDYE    +  TV A D     T+  V I+V++VND  P F+   Y   L    P + 
Sbjct: 509 AKLDYELIQRFTLTVIARDGGGEETTGRVRINVLDVNDNVPTFQKDAYVGALRENEPSV- 567

Query: 156 LADLTPGSVIGKVEAADGDK--GDRVTLSL-----RGPYEKMFSINDSGHISI---VDLS 205
                  + + ++ A D D    +++T S+      G Y  +        IS+   +D  
Sbjct: 568 -------TQLVRLRATDEDSPPNNQITYSIVNASAFGSYFDISVYEGYAVISVSRPLDYE 620

Query: 206 ALNTSTIQLVVVATDTGNPPRQASVPAIMH 235
            +    I L V+A D GNPP  ++VP  + 
Sbjct: 621 QIPNGLIYLTVMAKDAGNPPLNSTVPVTIE 650



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 65/218 (29%), Positives = 101/218 (46%), Gaps = 44/218 (20%)

Query: 45  FSKNEYSVSALENLPVNY-VLLTVTTNKPRDLRVKYWLSNDYGE-----------RFSI- 91
           FSK  Y VS +E++     VL+   T+  R        S +YG+           +F I 
Sbjct: 661 FSKPAYFVSVVESIMAGATVLILNATDLDR--------SREYGQESIIYSLEGSSQFRIG 712

Query: 92  SRQGDISLMQCLDYETEDSYRFTVYATD-----TLMTTSATVNISVVNVNDWDPRFRYPQ 146
           +R G+++    LD E +  Y   V A D        T  ATVNI+++++ND  P ++   
Sbjct: 713 ARSGELTTTSLLDREAKSEYILIVRAVDGGVGHNQKTGIATVNITLLDINDNHPTWKDAP 772

Query: 147 YELFLPHIPLADLT-PGSVIGKVEAADGDKGDRVTL--SLRGPYEKMFSINDS-GHIS-- 200
           Y     +I L ++T P S +  V A D D G+  TL  S++ P  K +SIN S G I   
Sbjct: 773 Y-----YINLVEMTPPDSDVTTVVAVDPDLGENGTLVYSIQPP-NKFYSINSSTGKIRTT 826

Query: 201 --IVDLSALNTSTIQL----VVVATDTGNPPRQASVPA 232
             ++D    +    +L    ++  TD G PP +A+  A
Sbjct: 827 HVMLDRENPDPQEAELMRKIIISVTDCGRPPLRATSSA 864



 Score = 47.4 bits (111), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 45/141 (31%), Positives = 65/141 (46%), Gaps = 15/141 (10%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDY---GERFSI-SRQGDISLM 100
           F    YSV   E+ PV   +  V    P DL     +   +      F+I S +G ++++
Sbjct: 124 FHNQPYSVRIPEDTPVGTPIFIVNATDP-DLGAGGSVLYSFQPPSPFFAIDSARGIVTVI 182

Query: 101 QCLDYETEDSYRFTVYATDT----LMTTSATVNISVVNVNDWDPRF-RYPQYELFLPHIP 155
           Q LDYET  +Y+ TV ATD      ++T A + I + +V D DP F   P       H P
Sbjct: 183 QELDYETTQAYQLTVNATDQDKTRPLSTLANLAIIITDVQDMDPIFINLPYSTNIYEHSP 242

Query: 156 LADLTPGSVIGKVEAADGDKG 176
                PG+ +  + A D DKG
Sbjct: 243 -----PGTTVRVITAIDQDKG 258



 Score = 47.4 bits (111), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 63/235 (26%), Positives = 107/235 (45%), Gaps = 45/235 (19%)

Query: 65   LTVTTNKPRDLRVKYWLS---NDYG---------------ERFSIS-RQGDISLMQCLDY 105
            ++V+ + PRD RV  WL+   ND G                +FS+  R   +  +  LD 
Sbjct: 992  VSVSEDVPRDFRV-VWLNCTDNDVGLNAELSYFITGGNVDGKFSVGYRDAMVRTVVNLDR 1050

Query: 106  ETEDSYRFTVYATDT-----LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLT 160
            ET  +Y   + A D        T +ATV ++V++VND  P F    YE  +P     D+ 
Sbjct: 1051 ETTAAYTLVLEAIDNGPVGKRRTGTATVFVTVLDVNDNRPIFLQSSYEASVPE----DIP 1106

Query: 161  PGSVIGKVEAADGDKGD--RVTLS-LRGPYEKMFSINDSGHISIVDLSALNT---STIQL 214
             G  I +++A D D+G+  RV    L+G +   F I+ S  + +     L+    S+  L
Sbjct: 1107 EGHSIVQLQATDADEGEFGRVWYRILQGNHGNHFRIHVSDGLLVRGPQPLDREQDSSHVL 1166

Query: 215  VVVATDTGNPPRQASVPAIMHFPE------AIVQQASSKL----NSGTSSTVLII 259
            +V A +    P ++SV  I++  +         QQ  S+L     +G  ++V+++
Sbjct: 1167 IVEAYNHDLGPMRSSVRVIVYVEDVNDEAPVFTQQQYSRLALRETAGIGTSVIVV 1221



 Score = 42.7 bits (99), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 59/208 (28%), Positives = 91/208 (43%), Gaps = 25/208 (12%)

Query: 41   RELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDL-----RVKYWLSNDYGERFSI-SRQ 94
             ++QFS   Y  + +ENL +   ++ V      ++     R     S      F I +  
Sbjct: 1299 EDVQFSNASYEAAIMENLALGTEIVRVQAYSIDNINLITYRFDAHTSAQAKALFKIDTYT 1358

Query: 95   GDISLMQCLDYETEDSYRFTVYATDTLMTTSATVN--ISVVNVNDWDPRFRYPQYELFLP 152
            G I++   +D E  D Y  TV A D      ATV   I+V++ ND  P+F          
Sbjct: 1359 GVITVKGLVDREKGDFYTLTVVADDGGPKVDATVKVYITVLDENDNSPQFDVTSDSAV-- 1416

Query: 153  HIPLADLTPGSVIGKVEAADGDKGD--RVTLSL-----RGPYEKMFSINDS-GHISI--- 201
             +P  D   G  +  V+A D D G   +V  SL      G +E + + NDS G + +   
Sbjct: 1417 SVP-EDCPVGQRVATVKAQDPDAGSNGQVVFSLASGNIAGAFE-IVTTNDSIGEVFVARP 1474

Query: 202  VDLSALNTSTIQLVVVATDTGNPPRQAS 229
            +D   L+   ++  VVA+D G PPR+ S
Sbjct: 1475 LDREELDHYILK--VVASDRGTPPRKKS 1500



 Score = 42.4 bits (98), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 53/197 (26%), Positives = 88/197 (44%), Gaps = 24/197 (12%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRV----KYWLSNDYGERF-----SISRQ 94
           +F+ +EYSV+  E   V + L        RD  +    + +L  +    F     S+  +
Sbjct: 339 EFNSSEYSVAITELAQVGFALPLFIQVVDRDEGLNSMFEVYLVGNNSHHFIISPTSVQGK 398

Query: 95  GDISLMQC--LDYETEDSYRFTVYATDTL--MTTSATVNISVVNVNDWDPRFRYPQYELF 150
            DI +     LDYET + Y F ++A +++      A V I+++N ND  P F  P Y + 
Sbjct: 399 ADIRIRVAIPLDYETVERYDFDLFANESVPDHVGYAKVKIALINENDNRPIFSQPLYNVS 458

Query: 151 LPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDSGHISIVDLSALN 208
           L      ++T G+ +  V A D D G    V+       ++     D+G I ++  + L+
Sbjct: 459 L----YENVTVGTSVLTVLATDNDVGTFGEVSYFFSDDPDRFSLDKDTGLIMLI--AKLD 512

Query: 209 TSTIQ---LVVVATDTG 222
              IQ   L V+A D G
Sbjct: 513 YELIQRFTLTVIARDGG 529



 Score = 40.8 bits (94), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 69/289 (23%), Positives = 120/289 (41%), Gaps = 67/289 (23%)

Query: 4    EDDFL-QPITLVVRA----IQYDNQDRYALATLIVSKAGTS-----------LRELQFSK 47
            +D FL  P+T V+R     I  + Q+ Y L T++ S  GT            + ++   +
Sbjct: 2103 QDRFLIHPVTGVIRVGNVTIDREEQESYRL-TVVASDRGTVPLSGTAIITILIDDINDCR 2161

Query: 48   NEY-----SVSALENLPVNYVLLTVTTNKPRDL--RVKYWLSN------------DYGER 88
             E+     +VS LE+     V+  VT    RDL  +++Y + +            D  + 
Sbjct: 2162 PEFLNPIQTVSVLESAEPGTVIANVTAID-RDLNPKLEYHIVSIVAKDDTDRLVPDQEDA 2220

Query: 89   FSIS-RQGDISLMQCLDYETEDSYRFTVYATD--------TLMTTSATVNISVVNVNDWD 139
            F+++   G + +   L+ E   +Y  T+   D         +   +A + +++++VND  
Sbjct: 2221 FAVNINTGSVLVKSPLNRELVATYEVTLSVIDNASDLPERAVSVPNAKLTVNILDVNDNT 2280

Query: 140  PRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDSG 197
            PRF+ P    +     L   TPG+ +  V A D DKG    +T SL         +   G
Sbjct: 2281 PRFK-PFGITYYTEKVLEGATPGTTLIAVSAVDPDKGLNGLITYSL-------LDLMPPG 2332

Query: 198  HISIVDLSA-----------LNTSTIQLVVVATDTGNPPRQASVPAIMH 235
            ++ + D SA                +   V A+D G+PPR A +P  + 
Sbjct: 2333 YVQLEDSSAGKVIANRTVDYEEVHWLNFTVRASDNGSPPRAAEIPVYLE 2381



 Score = 39.3 bits (90), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 57/202 (28%), Positives = 84/202 (41%), Gaps = 20/202 (9%)

Query: 31  LIVSKAGTSLRELQFSKNEYSVSAL---ENLPVNYVLLTVTTNKPRDLR---VKYWLSND 84
           +++S     +  L F  N +  + L   E+ PV     +VT    RD+    + + +S +
Sbjct: 8   VLISGCWGQVNRLPFFINHFFDTYLLISEDTPVGS---SVTQLLARDMDNDPLVFGVSGE 64

Query: 85  YGERFSISR--QGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRF 142
              RF       G + L Q LD ET+  +      +D     +  VNI V +VND  P F
Sbjct: 65  EASRFFAVEPDTGVVWLRQPLDRETKSEFTVEFSVSDHQGVITRKVNIQVGDVNDNAPTF 124

Query: 143 RYPQYELFLPHIPLADLTPGSVIGKVEAADGD--KGDRVTLSLRGPYEKMFSINDSGHIS 200
               Y + +P     D   G+ I  V A D D   G  V  S + P    F+I+ +  I 
Sbjct: 125 HNQPYSVRIPE----DTPVGTPIFIVNATDPDLGAGGSVLYSFQPP-SPFFAIDSARGIV 179

Query: 201 IV--DLSALNTSTIQLVVVATD 220
            V  +L    T   QL V ATD
Sbjct: 180 TVIQELDYETTQAYQLTVNATD 201


>gi|270006423|gb|EFA02871.1| cadherin-like protein [Tribolium castaneum]
          Length = 3284

 Score = 67.8 bits (164), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 63/199 (31%), Positives = 98/199 (49%), Gaps = 18/199 (9%)

Query: 44  QFSKNEYSVSALENLPVN-YVLLTVTTNKPRDL--RVKYWLSNDYGERFSISRQ-GDISL 99
           +F +  Y  +  EN P++ +V+    T+K   L  +++Y L  D  +RF I +  G I+ 
Sbjct: 676 EFKRQSYHATINENSPLSTWVVTPTATDKDIGLNAKIRYSLLGDKVDRFKIDQDAGIITT 735

Query: 100 MQCLDYETEDSYRFTVYATDTLMTT--SATVN--ISVVNVNDWDPRFRYPQYELFLPHIP 155
              LD E  + Y FTV A D   T   +A VN  I+V + ND  P F   +YE     + 
Sbjct: 736 SAILDREETEIYYFTVMAQDCSATEPRAAAVNLTITVTDENDNSPSFSSTKYE-----VN 790

Query: 156 LADLT-PGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIN-DSGHISIV-DLSALNTS 210
           ++D T  G  +    A+D D G   +++ +L G +   F+IN ++G I    DL+ L T 
Sbjct: 791 ISDKTKAGEFVFGARASDDDIGINSKISYALTGEHAPNFTINPETGVIKAAQDLAKLGTK 850

Query: 211 TIQLVVVATDTGNPPRQAS 229
              L + A D G  PR+ S
Sbjct: 851 VFNLEIEAADGGKKPRKTS 869



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 58/230 (25%), Positives = 104/230 (45%), Gaps = 24/230 (10%)

Query: 13   LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKP 72
            L V A+          AT++V+    +    +FS+  +SV+  EN  +   ++ VT++  
Sbjct: 1064 LTVEALDQGVPQMTGTATVLVTVLDKNDNPPRFSR-LFSVNVTENADLGSFVIQVTSSD- 1121

Query: 73   RDL----RVKYWLSNDYGERFSISR-QGDISLMQCLDYETEDSYRFTVYATDTLMTTSAT 127
            +D+       Y  + + GE+F I    G+++++  LD E +D Y   V A D        
Sbjct: 1122 KDIGDNANATYSFTENPGEKFKIDPISGNVTVVGHLDREQQDEYLLKVAAVDGAWKAETP 1181

Query: 128  VNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDK---GDRVTLSLR 184
            + I++ + ND  P F +  Y    P +   D+     +G+V A D DK      ++ SL+
Sbjct: 1182 LTITIQDQNDNAPEFEHSFYSFNFPEL-QRDVV---FVGQVAATDRDKQGPNSVISYSLQ 1237

Query: 185  GPYEKMFSIN-DSGHI--------SIVDLSALNTSTIQLVVVATDTGNPP 225
             P + +F+++  SG I            + A   +   L ++ATD G PP
Sbjct: 1238 QPSD-LFTVDPASGDIFSKRSLRFKYTQMEASPENMYSLTILATDNGKPP 1286



 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 51/197 (25%), Positives = 85/197 (43%), Gaps = 15/197 (7%)

Query: 9    QPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVT 68
            Q   L VRAI      ++   T+ +   G +     F+   Y V   EN P+   +LTV 
Sbjct: 1376 QEYLLRVRAIDKGVPPQHDEVTVTLVVTGENKYMPVFTALSYQVIVPENEPLGSTILTVN 1435

Query: 69   TNKPRD-----LRVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATD---T 120
             +         +R K    N+  E       G ++++Q LDY+T   Y   + A D    
Sbjct: 1436 ASDDDQGPNGMIRYKISGGNERKEFAVDPYSGAVTILQPLDYDTIQEYHLNITAEDLGFK 1495

Query: 121  LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVT 180
              +T+A + I++ ++ND  P F    YE ++      +L P S + +V+A D D      
Sbjct: 1496 PQSTTAMLTITLTDINDNSPTFNQSIYEAYISE----NLPPNSFVFQVKATDIDSPKNAI 1551

Query: 181  LSLR---GPYEKMFSIN 194
            +      GP + MF+I+
Sbjct: 1552 IQYSISDGPDKDMFAID 1568



 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 52/191 (27%), Positives = 93/191 (48%), Gaps = 18/191 (9%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYG-ERFSISRQ-GDISL 99
            F+++ Y     ENLP N  +  V     + P++  ++Y +S+    + F+I ++ G ++ 
Sbjct: 1517 FNQSIYEAYISENLPPNSFVFQVKATDIDSPKNAIIQYSISDGPDKDMFAIDQKTGRVTA 1576

Query: 100  MQCLDYETEDSYRFTVYAT--DTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLA 157
                DYE  D Y   + A+  D+ M   A + + +  VN++ PRF  P +     H  ++
Sbjct: 1577 KYSFDYEENDLYTINIVASNPDSPMFGIAELRVHINGVNEYYPRFIQPVF-----HFDVS 1631

Query: 158  DLTP-GSVIGKVEAADGDKGDRVT---LSLRGPYEKMFSIN-DSGHISIV-DLSALNTST 211
            +    G+ +G V+A D D GD      L +    ++ F+IN +SG IS+   L     S 
Sbjct: 1632 ESAEVGTQVGTVQATDQDAGDDGKVYYLFVGSSNDRGFNINSESGVISVSRSLDRETQSR 1691

Query: 212  IQLVVVATDTG 222
            I L ++A + G
Sbjct: 1692 IVLTIMAKNAG 1702



 Score = 51.6 bits (122), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 52/183 (28%), Positives = 85/183 (46%), Gaps = 15/183 (8%)

Query: 50  YSVSALENLPVNYVLLTVTTNKPRDLRVKYW--LSNDYGERFSISRQGDISLMQCLDYET 107
           YS+S  E+L     + TV  + P  + V  +  +  D G        G ++L+  LD ET
Sbjct: 51  YSIS--EDLGPGQSVATVKADDPDTIGVLEYSLIRGDDGHFVLDKNTGVLTLVDSLDRET 108

Query: 108 EDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGK 167
           +D Y+ TV A+D    T   + + + + ND  P F    Y   +P     +   G  +G+
Sbjct: 109 KDVYKLTVRASDGNQHTDTVLTVQITDTNDNPPAFLETAYSFDIPE----NAQRGHKVGQ 164

Query: 168 VEAADGDKG--DRVTLSLRGPYEK-MFSINDSGHISIVDLSALNTSTIQ---LVVVATDT 221
           V+A D D G   ++T S+   +   +FS+N    +  +  S L+   +Q   LVV A D 
Sbjct: 165 VKAVDADLGINAQLTYSVISDWANDVFSLNPQTGVFTL-TSRLDYEEVQHYILVVQAQDA 223

Query: 222 GNP 224
           G+P
Sbjct: 224 GHP 226



 Score = 46.2 bits (108), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 72/269 (26%), Positives = 114/269 (42%), Gaps = 44/269 (16%)

Query: 1   DINEDDFLQPITLVVRA---IQYDNQDRYAL--------------------ATLIVSKAG 37
           D N D  +   T VVR    + Y+ + RY L                    A +++S + 
Sbjct: 503 DTNRDFSIAEDTGVVRVAKNLNYERKSRYVLTVRAEDCAGDVGGEVVRADTAEIVISVSD 562

Query: 38  TSLRELQFSKNEYSVSALEN-LPVN--YVLLTVTTNK---PRDLRVKYWLSNDYGERFSI 91
            +     F  + Y    +EN +P N  YV+     +    P +  V+Y++     + F I
Sbjct: 563 INDNPPTFLDSPYLAYVMENTIPPNGGYVITVQAYDADTPPLNSLVRYFIKEGKPDTFKI 622

Query: 92  -SRQGDISLMQCLDYETEDSYRFTVYATDTL---MTTSATVNISVVNVNDWDPRFRYPQY 147
            +  G+ISL++ LD E +  Y  ++ A DT    +T + TV I V +VND  P F+   Y
Sbjct: 623 NASTGEISLLRALDREAQAEYTLSLGAMDTGSPPLTGTGTVKIIVQDVNDHTPEFKRQSY 682

Query: 148 ELFLPHIPLADLTPGSV-IGKVEAADGDKG--DRVTLSLRGPYEKMFSIN-DSGHISIVD 203
                H  + + +P S  +    A D D G   ++  SL G     F I+ D+G I+   
Sbjct: 683 -----HATINENSPLSTWVVTPTATDKDIGLNAKIRYSLLGDKVDRFKIDQDAGIITTSA 737

Query: 204 -LSALNTSTIQLVVVATD-TGNPPRQASV 230
            L    T      V+A D +   PR A+V
Sbjct: 738 ILDREETEIYYFTVMAQDCSATEPRAAAV 766



 Score = 38.9 bits (89), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 45/149 (30%), Positives = 66/149 (44%), Gaps = 16/149 (10%)

Query: 89  FSISRQ-GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRY 144
           FS++ Q G  +L   LDYE    Y   V A D     ++++ TV  +V+++ND  P F  
Sbjct: 191 FSLNPQTGVFTLTSRLDYEEVQHYILVVQAQDAGHPALSSTLTVYCNVLDLNDNTPLFDP 250

Query: 145 PQY--ELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR---GPYEKMFSINDSGH- 198
             Y  E+F       +++  + I  V A D D GD   +  R   G     F +  +G  
Sbjct: 251 MSYTNEIF------ENVSIATPIVTVSATDLDSGDNGKIVFRITAGDENGDFEMTPNGTV 304

Query: 199 ISIVDLSALNTSTIQLVVVATDTGNPPRQ 227
           I+  +L         LVV ATD   PP Q
Sbjct: 305 ITKKELDRERQGLYNLVVTATDQAKPPDQ 333



 Score = 38.9 bits (89), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 45/158 (28%), Positives = 75/158 (47%), Gaps = 14/158 (8%)

Query: 77   VKYWLSN-DYGERFSISRQ-GDISLM-QCLDYETEDSYRFTVYATDT---LMTTSATVNI 130
            V+Y ++  + GE  ++ +  G++ +  + LDYET   Y   + A D+    + T   + I
Sbjct: 921  VRYAIAGGNIGEALTMDKNTGEVHVAGRGLDYETLPVYEVWIEAKDSDVPPLRTVLQLTI 980

Query: 131  SVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGD--RVTLSLRGPYE 188
            +V + ND  P F    Y   +    L + +P  ++ KV A D D G+  +VT  L   ++
Sbjct: 981  NVTDANDNSPVFNSNLYNASI----LEEESPPQLVVKVSAEDLDSGENGQVTYKLTDDFD 1036

Query: 189  KMFSIN-DSGHI-SIVDLSALNTSTIQLVVVATDTGNP 224
              F I+ +SG I +   L    T   +L V A D G P
Sbjct: 1037 GTFEIDSESGEIYTNARLDREETPAYELTVEALDQGVP 1074



 Score = 38.1 bits (87), Expect = 8.1,   Method: Compositional matrix adjust.
 Identities = 55/178 (30%), Positives = 80/178 (44%), Gaps = 24/178 (13%)

Query: 74   DLRVKYWL---SNDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDTLM-----TT 124
            D +V Y     SND G  F+I S  G IS+ + LD ET+     T+ A +        T 
Sbjct: 1653 DGKVYYLFVGSSNDRG--FNINSESGVISVSRSLDRETQSRIVLTIMAKNAGGIRGNDTD 1710

Query: 125  SATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTP-GSVIGKVEAADGD---KGDRVT 180
             A V + V + ND  P F    YE     + +++  P GS +  V+A D D   + ++ +
Sbjct: 1711 EAQVIVEVQDGND-PPEFLQTLYE-----VEISEGAPVGSKVTAVKAVDKDVRPQNNQFS 1764

Query: 181  LSL-RGPYEKMFSIN-DSGHISIVD-LSALNTSTIQLVVVATDTGNPPRQASVPAIMH 235
             S+  G  E+ F I+  SG I     L    T    LVV   DTG PP+  +    +H
Sbjct: 1765 YSIIGGNIEQAFKIDPQSGQIETARFLDRETTPEYSLVVGGIDTGLPPQTGTTTVKIH 1822


>gi|189236209|ref|XP_971084.2| PREDICTED: similar to AGAP007924-PA [Tribolium castaneum]
          Length = 4974

 Score = 67.8 bits (164), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 63/199 (31%), Positives = 98/199 (49%), Gaps = 18/199 (9%)

Query: 44   QFSKNEYSVSALENLPVN-YVLLTVTTNKPRDL--RVKYWLSNDYGERFSISRQ-GDISL 99
            +F +  Y  +  EN P++ +V+    T+K   L  +++Y L  D  +RF I +  G I+ 
Sbjct: 2366 EFKRQSYHATINENSPLSTWVVTPTATDKDIGLNAKIRYSLLGDKVDRFKIDQDAGIITT 2425

Query: 100  MQCLDYETEDSYRFTVYATDTLMTT--SATVN--ISVVNVNDWDPRFRYPQYELFLPHIP 155
               LD E  + Y FTV A D   T   +A VN  I+V + ND  P F   +YE     + 
Sbjct: 2426 SAILDREETEIYYFTVMAQDCSATEPRAAAVNLTITVTDENDNSPSFSSTKYE-----VN 2480

Query: 156  LADLT-PGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIN-DSGHISIV-DLSALNTS 210
            ++D T  G  +    A+D D G   +++ +L G +   F+IN ++G I    DL+ L T 
Sbjct: 2481 ISDKTKAGEFVFGARASDDDIGINSKISYALTGEHAPNFTINPETGVIKAAQDLAKLGTK 2540

Query: 211  TIQLVVVATDTGNPPRQAS 229
               L + A D G  PR+ S
Sbjct: 2541 VFNLEIEAADGGKKPRKTS 2559



 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 58/230 (25%), Positives = 104/230 (45%), Gaps = 24/230 (10%)

Query: 13   LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKP 72
            L V A+          AT++V+    +    +FS+  +SV+  EN  +   ++ VT++  
Sbjct: 2754 LTVEALDQGVPQMTGTATVLVTVLDKNDNPPRFSR-LFSVNVTENADLGSFVIQVTSSD- 2811

Query: 73   RDL----RVKYWLSNDYGERFSISR-QGDISLMQCLDYETEDSYRFTVYATDTLMTTSAT 127
            +D+       Y  + + GE+F I    G+++++  LD E +D Y   V A D        
Sbjct: 2812 KDIGDNANATYSFTENPGEKFKIDPISGNVTVVGHLDREQQDEYLLKVAAVDGAWKAETP 2871

Query: 128  VNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDK---GDRVTLSLR 184
            + I++ + ND  P F +  Y    P +   D+     +G+V A D DK      ++ SL+
Sbjct: 2872 LTITIQDQNDNAPEFEHSFYSFNFPEL-QRDVV---FVGQVAATDRDKQGPNSVISYSLQ 2927

Query: 185  GPYEKMFSIN-DSGHI--------SIVDLSALNTSTIQLVVVATDTGNPP 225
             P + +F+++  SG I            + A   +   L ++ATD G PP
Sbjct: 2928 QPSD-LFTVDPASGDIFSKRSLRFKYTQMEASPENMYSLTILATDNGKPP 2976



 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 51/197 (25%), Positives = 85/197 (43%), Gaps = 15/197 (7%)

Query: 9    QPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVT 68
            Q   L VRAI      ++   T+ +   G +     F+   Y V   EN P+   +LTV 
Sbjct: 3066 QEYLLRVRAIDKGVPPQHDEVTVTLVVTGENKYMPVFTALSYQVIVPENEPLGSTILTVN 3125

Query: 69   TNKPRD-----LRVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATD---T 120
             +         +R K    N+  E       G ++++Q LDY+T   Y   + A D    
Sbjct: 3126 ASDDDQGPNGMIRYKISGGNERKEFAVDPYSGAVTILQPLDYDTIQEYHLNITAEDLGFK 3185

Query: 121  LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVT 180
              +T+A + I++ ++ND  P F    YE ++      +L P S + +V+A D D      
Sbjct: 3186 PQSTTAMLTITLTDINDNSPTFNQSIYEAYISE----NLPPNSFVFQVKATDIDSPKNAI 3241

Query: 181  LSLR---GPYEKMFSIN 194
            +      GP + MF+I+
Sbjct: 3242 IQYSISDGPDKDMFAID 3258



 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 52/191 (27%), Positives = 93/191 (48%), Gaps = 18/191 (9%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSND-YGERFSISRQ-GDISL 99
            F+++ Y     ENLP N  +  V     + P++  ++Y +S+    + F+I ++ G ++ 
Sbjct: 3207 FNQSIYEAYISENLPPNSFVFQVKATDIDSPKNAIIQYSISDGPDKDMFAIDQKTGRVTA 3266

Query: 100  MQCLDYETEDSYRFTVYAT--DTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLA 157
                DYE  D Y   + A+  D+ M   A + + +  VN++ PRF  P +     H  ++
Sbjct: 3267 KYSFDYEENDLYTINIVASNPDSPMFGIAELRVHINGVNEYYPRFIQPVF-----HFDVS 3321

Query: 158  DLTP-GSVIGKVEAAD---GDKGDRVTLSLRGPYEKMFSIN-DSGHISIV-DLSALNTST 211
            +    G+ +G V+A D   GD G    L +    ++ F+IN +SG IS+   L     S 
Sbjct: 3322 ESAEVGTQVGTVQATDQDAGDDGKVYYLFVGSSNDRGFNINSESGVISVSRSLDRETQSR 3381

Query: 212  IQLVVVATDTG 222
            I L ++A + G
Sbjct: 3382 IVLTIMAKNAG 3392



 Score = 51.6 bits (122), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 53/184 (28%), Positives = 87/184 (47%), Gaps = 17/184 (9%)

Query: 50   YSVSALENLPVNYVLLTVTTNKPRDLRVKYW--LSNDYGERFSISRQGDISLMQCLDYET 107
            YS+S  E+L     + TV  + P  + V  +  +  D G        G ++L+  LD ET
Sbjct: 1741 YSIS--EDLGPGQSVATVKADDPDTIGVLEYSLIRGDDGHFVLDKNTGVLTLVDSLDRET 1798

Query: 108  EDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGK 167
            +D Y+ TV A+D    T   + + + + ND  P F    Y   +P     +   G  +G+
Sbjct: 1799 KDVYKLTVRASDGNQHTDTVLTVQITDTNDNPPAFLETAYSFDIPE----NAQRGHKVGQ 1854

Query: 168  VEAADGDKG--DRVTLSLRGPYEK-MFSIN-DSGHISIVDLSALNTSTIQ---LVVVATD 220
            V+A D D G   ++T S+   +   +FS+N  +G  ++   S L+   +Q   LVV A D
Sbjct: 1855 VKAVDADLGINAQLTYSVISDWANDVFSLNPQTGVFTLT--SRLDYEEVQHYILVVQAQD 1912

Query: 221  TGNP 224
             G+P
Sbjct: 1913 AGHP 1916



 Score = 48.9 bits (115), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 54/213 (25%), Positives = 103/213 (48%), Gaps = 18/213 (8%)

Query: 25  RYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWL 81
           ++A   L V+    +    +FS+++++VS  EN P   ++  +T    ++  +  V Y L
Sbjct: 553 KWAYTQLKVTILDENDEAPRFSQSKFNVSLSENAPPGTLIAMLTASDHDQGTNGSVAYSL 612

Query: 82  SNDYGERFS-----ISRQGDISLMQCLDYETEDSYRFTVYATDTLM---TTSATVNISVV 133
                + +       S  G ++  + LD E    Y   V A D  +   +++ATV ++V+
Sbjct: 613 HPVTQQHYDNVLVLDSLTGQLTTRKKLDREEISHYEIHVIAKDQGLPPQSSTATVYLNVI 672

Query: 134 NVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDR--VTLSLRGPYEKMF 191
           +VND  P F    Y + +P     ++ PGS + KV A+D D+G+   +T +L    + +F
Sbjct: 673 DVNDNSPEFYPLNYFVAVPE----NVKPGSSLVKVTASDRDEGENAIITYNLESGGDDLF 728

Query: 192 SIND-SGHISIVDLSALNTSTIQLVVVATDTGN 223
           +I++ +G I+I           +L + A D G+
Sbjct: 729 TIDEWTGVITIRGDLKWTKPIHRLKISAKDHGD 761



 Score = 48.1 bits (113), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 46/166 (27%), Positives = 74/166 (44%), Gaps = 19/166 (11%)

Query: 45   FSKNEYSVSALENLPVN---YVLLTVTTNKPRDLRVKYWLSNDYGE-RFSISRQGDISLM 100
            F    Y  S LE+ PVN   + L    T+   + R+ Y +S    E +F I   G + + 
Sbjct: 985  FDHTSYETSLLESTPVNERFFALAASDTDLGLNGRISYVISEGNTEGKFGIFPDGFLYVR 1044

Query: 101  QCLDYETEDSYRFTVYATDTLMTTSAT---VNISVVNVNDWDPRFRYPQYELFLPHIPLA 157
            Q LD E +D Y  +V A+D    + ++   V I V++ ND  P F    +   +      
Sbjct: 1045 QSLDREDKDYYSLSVTASDLGNPSRSSVVPVVIHVIDENDNSPEFTNASFSFNI----RE 1100

Query: 158  DLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSGHISIVD 203
            +  P S +GK+ A D D G    L        +FS+++S    ++D
Sbjct: 1101 NEPPDSFVGKLTATDRDIGRNAEL--------IFSLSNSQSDFVID 1138



 Score = 46.6 bits (109), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 72/269 (26%), Positives = 114/269 (42%), Gaps = 44/269 (16%)

Query: 1    DINEDDFLQPITLVVRA---IQYDNQDRYAL--------------------ATLIVSKAG 37
            D N D  +   T VVR    + Y+ + RY L                    A +++S + 
Sbjct: 2193 DTNRDFSIAEDTGVVRVAKNLNYERKSRYVLTVRAEDCAGDVGGEVVRADTAEIVISVSD 2252

Query: 38   TSLRELQFSKNEYSVSALEN-LPVN--YVLLTVTTNK---PRDLRVKYWLSNDYGERFSI 91
             +     F  + Y    +EN +P N  YV+     +    P +  V+Y++     + F I
Sbjct: 2253 INDNPPTFLDSPYLAYVMENTIPPNGGYVITVQAYDADTPPLNSLVRYFIKEGKPDTFKI 2312

Query: 92   -SRQGDISLMQCLDYETEDSYRFTVYATDTL---MTTSATVNISVVNVNDWDPRFRYPQY 147
             +  G+ISL++ LD E +  Y  ++ A DT    +T + TV I V +VND  P F+   Y
Sbjct: 2313 NASTGEISLLRALDREAQAEYTLSLGAMDTGSPPLTGTGTVKIIVQDVNDHTPEFKRQSY 2372

Query: 148  ELFLPHIPLADLTPGSV-IGKVEAADGDKG--DRVTLSLRGPYEKMFSIN-DSGHISIVD 203
                 H  + + +P S  +    A D D G   ++  SL G     F I+ D+G I+   
Sbjct: 2373 -----HATINENSPLSTWVVTPTATDKDIGLNAKIRYSLLGDKVDRFKIDQDAGIITTSA 2427

Query: 204  -LSALNTSTIQLVVVATD-TGNPPRQASV 230
             L    T      V+A D +   PR A+V
Sbjct: 2428 ILDREETEIYYFTVMAQDCSATEPRAAAV 2456



 Score = 45.4 bits (106), Expect = 0.051,   Method: Compositional matrix adjust.
 Identities = 49/154 (31%), Positives = 69/154 (44%), Gaps = 19/154 (12%)

Query: 84  DYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDTLM---TTSATVNISVVNVNDWDP 140
           DY   F I R   +     LD E    Y  TV ATD      T +A + I V +VND +P
Sbjct: 412 DYTPSFDIVRVNGV-----LDREEISKYNLTVVATDKGTPPRTATAFLIIHVNDVNDHEP 466

Query: 141 RFRYPQYELFLPHIPLADLTP-GSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-D 195
            F   +Y        L++L P G+ +  + A D D G    +    + G   + FSIN D
Sbjct: 467 VFEKSEYSAI-----LSELAPSGTYVAGITATDEDSGVNAQIYYAFVSGNEHQWFSINSD 521

Query: 196 SGHISIVD-LSALNTSTIQLVVVATDTGNPPRQA 228
           +G I+  D L      T++L + A D G  P+ A
Sbjct: 522 TGLITTRDILDREVQGTVELNISARDGGPNPKWA 555



 Score = 42.4 bits (98), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 57/220 (25%), Positives = 93/220 (42%), Gaps = 19/220 (8%)

Query: 16   RAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDL 75
             A+Q + +   A  T+I +    S R   F    ++ S  EN P    +LTV+ +     
Sbjct: 1600 EAVQNERKSSEAYLTIIATDF--SARGPSFESGLFTGSVFENEPPGTSILTVSASFDSG- 1656

Query: 76   RVKYWLSNDYGERFSISRQGDI-------SLMQCLDYETE-DSYRFTVY---ATDTLMTT 124
             V+Y+++N  G+   + R  DI       S    LD E   ++Y   VY   A+ +  T 
Sbjct: 1657 EVEYYVTNVTGDGAQVDRLFDIDTKLGVLSTATQLDREQGVETYEVEVYAIVASGSPKTN 1716

Query: 125  SATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSL- 183
               + I V++ ND  P F+    +  L +    DL PG  +  V+A D D    +  SL 
Sbjct: 1717 RTKIQIKVLDKNDSPPSFK----DTPLYYSISEDLGPGQSVATVKADDPDTIGVLEYSLI 1772

Query: 184  RGPYEKMFSINDSGHISIVDLSALNTSTIQLVVVATDTGN 223
            RG         ++G +++VD     T  +  + V    GN
Sbjct: 1773 RGDDGHFVLDKNTGVLTLVDSLDRETKDVYKLTVRASDGN 1812



 Score = 40.8 bits (94), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 57/206 (27%), Positives = 88/206 (42%), Gaps = 23/206 (11%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDL------RVKYWLSNDYGERFSISRQ-GDI 97
            F +++  V   EN  V      V   + RDL      RV Y L+ +  ++F IS   G I
Sbjct: 881  FDRDKDEVKLAENAAVGQ---EVYLARARDLDAGINSRVTYHLNYNPDDQFRISEATGVI 937

Query: 98   SLMQCLDYETEDSYRFTVYATDTL---MTTSATVNISVVNVNDWDPRFRYPQYELFLPHI 154
             L + +  E   S    V A+D     +++   V + + +VND  P F +  YE      
Sbjct: 938  YLNRPIRAEPGLSLHVEVTASDGGEPPLSSKQLVRVVIEDVNDHTPVFDHTSYE-----T 992

Query: 155  PLADLTP-GSVIGKVEAADGDKG--DRVTLSL-RGPYEKMFSINDSGHISIVD-LSALNT 209
             L + TP       + A+D D G   R++  +  G  E  F I   G + +   L   + 
Sbjct: 993  SLLESTPVNERFFALAASDTDLGLNGRISYVISEGNTEGKFGIFPDGFLYVRQSLDREDK 1052

Query: 210  STIQLVVVATDTGNPPRQASVPAIMH 235
                L V A+D GNP R + VP ++H
Sbjct: 1053 DYYSLSVTASDLGNPSRSSVVPVVIH 1078



 Score = 40.8 bits (94), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 58/199 (29%), Positives = 90/199 (45%), Gaps = 26/199 (13%)

Query: 44   QFSKNEYSVSALENLPVN-YVLLTVTTNKPRDLRVKYWLS----NDYGERFSISRQ-GDI 97
            +F +  Y V   E  PV   V+   T++    L    + S    ND G RF+I    G I
Sbjct: 1197 KFLRTPYRVQVSEGSPVGTQVIRLFTSDADEGLNGDVFYSIVQGNDDG-RFTIEEATGQI 1255

Query: 98   SLMQCLDYETEDSYRFTVYATDT----LMTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
             L + LD ET  +Y  TV A D      ++++ TV++ V++ ND  P F     +     
Sbjct: 1256 ILSKILDRETVSNYLLTVVARDAGQMRQLSSTTTVSVEVMDENDNSPEFTQTNSK----- 1310

Query: 154  IPLADLTP-GSVIGKVEAADGDKG--DRVTLSLR-GPYEKMFSIN-DSGHISI---VDLS 205
            I + + TP  + + +  A D D G    V  S+  G  +  F ++  SG + +   +D  
Sbjct: 1311 ISVIETTPVNTELIQFRATDADLGMNSEVVFSISAGNRKDTFHVDPSSGTLYLHKPLDYE 1370

Query: 206  ALNTSTIQLVVVATDTGNP 224
             L  S  QL + A+D GNP
Sbjct: 1371 EL--SAYQLNITASDNGNP 1387



 Score = 40.4 bits (93), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 57/234 (24%), Positives = 101/234 (43%), Gaps = 20/234 (8%)

Query: 13  LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVN-YVLLTVTTNK 71
           L V A       R A A LI+     +  E  F K+EYS    E  P   YV     T++
Sbjct: 436 LTVVATDKGTPPRTATAFLIIHVNDVNDHEPVFEKSEYSAILSELAPSGTYVAGITATDE 495

Query: 72  PRDLRVKYW---LSNDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATD---TLMTT 124
              +  + +   +S +  + FSI S  G I+    LD E + +    + A D        
Sbjct: 496 DSGVNAQIYYAFVSGNEHQWFSINSDTGLITTRDILDREVQGTVELNISARDGGPNPKWA 555

Query: 125 SATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLS 182
              + +++++ ND  PRF   ++ + L      +  PG++I  + A+D D+G    V  S
Sbjct: 556 YTQLKVTILDENDEAPRFSQSKFNVSLSE----NAPPGTLIAMLTASDHDQGTNGSVAYS 611

Query: 183 L----RGPYEKMFSIND-SGHISI-VDLSALNTSTIQLVVVATDTGNPPRQASV 230
           L    +  Y+ +  ++  +G ++    L     S  ++ V+A D G PP+ ++ 
Sbjct: 612 LHPVTQQHYDNVLVLDSLTGQLTTRKKLDREEISHYEIHVIAKDQGLPPQSSTA 665



 Score = 39.3 bits (90), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 45/149 (30%), Positives = 66/149 (44%), Gaps = 16/149 (10%)

Query: 89   FSISRQ-GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRY 144
            FS++ Q G  +L   LDYE    Y   V A D     ++++ TV  +V+++ND  P F  
Sbjct: 1881 FSLNPQTGVFTLTSRLDYEEVQHYILVVQAQDAGHPALSSTLTVYCNVLDLNDNTPLFDP 1940

Query: 145  PQY--ELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR---GPYEKMFSINDSGH- 198
              Y  E+F       +++  + I  V A D D GD   +  R   G     F +  +G  
Sbjct: 1941 MSYTNEIF------ENVSIATPIVTVSATDLDSGDNGKIVFRITAGDENGDFEMTPNGTV 1994

Query: 199  ISIVDLSALNTSTIQLVVVATDTGNPPRQ 227
            I+  +L         LVV ATD   PP Q
Sbjct: 1995 ITKKELDRERQGLYNLVVTATDQAKPPDQ 2023



 Score = 38.9 bits (89), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 45/158 (28%), Positives = 75/158 (47%), Gaps = 14/158 (8%)

Query: 77   VKYWLSN-DYGERFSISRQ-GDISLM-QCLDYETEDSYRFTVYATDT---LMTTSATVNI 130
            V+Y ++  + GE  ++ +  G++ +  + LDYET   Y   + A D+    + T   + I
Sbjct: 2611 VRYAIAGGNIGEALTMDKNTGEVHVAGRGLDYETLPVYEVWIEAKDSDVPPLRTVLQLTI 2670

Query: 131  SVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGD--RVTLSLRGPYE 188
            +V + ND  P F    Y   +    L + +P  ++ KV A D D G+  +VT  L   ++
Sbjct: 2671 NVTDANDNSPVFNSNLYNASI----LEEESPPQLVVKVSAEDLDSGENGQVTYKLTDDFD 2726

Query: 189  KMFSIN-DSGHI-SIVDLSALNTSTIQLVVVATDTGNP 224
              F I+ +SG I +   L    T   +L V A D G P
Sbjct: 2727 GTFEIDSESGEIYTNARLDREETPAYELTVEALDQGVP 2764



 Score = 38.1 bits (87), Expect = 7.6,   Method: Compositional matrix adjust.
 Identities = 55/178 (30%), Positives = 80/178 (44%), Gaps = 24/178 (13%)

Query: 74   DLRVKYWL---SNDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDTLM-----TT 124
            D +V Y     SND G  F+I S  G IS+ + LD ET+     T+ A +        T 
Sbjct: 3343 DGKVYYLFVGSSNDRG--FNINSESGVISVSRSLDRETQSRIVLTIMAKNAGGIRGNDTD 3400

Query: 125  SATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTP-GSVIGKVEAADGD---KGDRVT 180
             A V + V + ND  P F    YE     + +++  P GS +  V+A D D   + ++ +
Sbjct: 3401 EAQVIVEVQDGND-PPEFLQTLYE-----VEISEGAPVGSKVTAVKAVDKDVRPQNNQFS 3454

Query: 181  LSL-RGPYEKMFSIN-DSGHISIVD-LSALNTSTIQLVVVATDTGNPPRQASVPAIMH 235
             S+  G  E+ F I+  SG I     L    T    LVV   DTG PP+  +    +H
Sbjct: 3455 YSIIGGNIEQAFKIDPQSGQIETARFLDRETTPEYSLVVGGIDTGLPPQTGTTTVKIH 3512



 Score = 38.1 bits (87), Expect = 7.7,   Method: Compositional matrix adjust.
 Identities = 56/219 (25%), Positives = 97/219 (44%), Gaps = 32/219 (14%)

Query: 45  FSKNEYSVSALEN-LPVNYVLLTVTTNKP--RDLRVKYWLSNDYGERFSISRQ-GDISLM 100
           F  ++Y VS  E+ LP   VL  + T+     + ++ Y+L+ D   +F++  + G IS  
Sbjct: 243 FDHSDYIVSLNESVLPGTPVLQVMATDNDLGDNAKITYYLA-DTERQFTVDPETGVISTT 301

Query: 101 QCLDYETED----------SYRFTVYATD---TLMTTSATVNISVVNVNDWDP--RFRYP 145
           + L+   ++          S  FTV+A D           V +++V+ ND DP  +FRY 
Sbjct: 302 ETLECPQQNCPQTTKSCPKSCVFTVFARDHGSPRQDGRTYVTVNLVDANDHDPVIKFRYF 361

Query: 146 QYELFLPHIPLADLTPGS-----VIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSGHIS 200
            +      +   D   G+      +  V++ +G  G+     + G     F ++ +    
Sbjct: 362 PFNAMFATV---DENAGNGSVVAAVSVVDSDEGLNGETTVRIVSGNELNHFRLDYTPSFD 418

Query: 201 IVDLSAL----NTSTIQLVVVATDTGNPPRQASVPAIMH 235
           IV ++ +      S   L VVATD G PPR A+   I+H
Sbjct: 419 IVRVNGVLDREEISKYNLTVVATDKGTPPRTATAFLIIH 457


>gi|405951762|gb|EKC19647.1| Protocadherin-11 Y-linked [Crassostrea gigas]
          Length = 1045

 Score = 67.8 bits (164), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 59/207 (28%), Positives = 96/207 (46%), Gaps = 13/207 (6%)

Query: 89  FSISRQGDISLMQCLDYETEDSYRFTVYATDTLM---TTSATVNISVVNVNDWDPRFRYP 145
           F +++ G +     LD E ++ Y FTV+ TD      ++SA V I++ + ND  P+F +P
Sbjct: 615 FEVAKDGVVKTTMSLDREKQEVYDFTVFVTDKGQPPKSSSARVKITIDDENDNSPKFVFP 674

Query: 146 QYELFLPHIPLADLTPGSVIGKVEAADGDK--GDRVTLSLRGP--YEKMFSINDSGH-IS 200
                   +   +  PG++I ++ A D DK     +T S+ G    E  +S N +G  I+
Sbjct: 675 SSTNNTVMVS-QNTKPGAIIARIRAVDPDKEQNGEITYSIEGANFSEVFYSNNHTGDIIA 733

Query: 201 IVDLSALNTSTIQLVVVATDTGNPPRQASVPAIMHFPEAIVQQASSKLNSGTSSTVLIIL 260
              L   +  T  LV VA D G+  +   V   +    A    ++S+ N     T++I+L
Sbjct: 734 KKGLEEYSGQTFSLVAVARDLGSAFQATRVEFFVRVAGADYLDSTSQTN----ITIVIVL 789

Query: 261 GVVLIVLGFVIILLILYIHKNKHTKNN 287
             V + L   IIL I  I    H + N
Sbjct: 790 VTVTLALSGFIILTICIIRWLDHNRKN 816



 Score = 44.3 bits (103), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 51/205 (24%), Positives = 93/205 (45%), Gaps = 28/205 (13%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKY-WLSNDYGERFSI---SRQGD 96
           +FS N Y  S  EN      ++ V     ++ ++  V+Y  L N+  +++ +   S  G 
Sbjct: 461 KFSSNIYQGSIPENNRKGTQVIQVQATDVDQGQNGEVQYQLLQNNVTQQYELAIDSSTGK 520

Query: 97  ISLMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
           ++     D ET  ++ F V A+D   T ++++ATV + V++ ND  P F     ++FL  
Sbjct: 521 VTTGITFDRETTPTFVFKVIASDKGPTTLSSTATVMVKVIDENDVAPAFL---EKVFLFK 577

Query: 154 IPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYE-------KMFSINDSGHI-SIVDLS 205
           +       G+V+G++ A D D+G      + G +E       + F +   G + + + L 
Sbjct: 578 VS-EQKAAGTVVGRLIARDFDEG------VNGEFEFYAESGTQPFEVAKDGVVKTTMSLD 630

Query: 206 ALNTSTIQLVVVATDTGNPPRQASV 230
                     V  TD G PP+ +S 
Sbjct: 631 REKQEVYDFTVFVTDKGQPPKSSSA 655



 Score = 38.5 bits (88), Expect = 6.2,   Method: Compositional matrix adjust.
 Identities = 45/158 (28%), Positives = 70/158 (44%), Gaps = 21/158 (13%)

Query: 50  YSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGER----FSISR-QGDISLMQ 101
           Y+VS  E+ PV  ++LT+     +  ++  ++Y LSN   E     F I    G + + +
Sbjct: 251 YNVSVKEDEPVGSIILTLKATDLDSGKNAEIRYRLSNHQSENIKQLFEIDEITGQLRIAK 310

Query: 102 CLDYETEDSYRFTVYAT---DTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLA- 157
            L Y   + YR  V A+   D  +T  A+V + V +  +  P      +   LP   +A 
Sbjct: 311 PLPYNDGNPYRVIVEASDLGDQPLTVQASVKVLVEDSANNPPEI----HVTLLPTSDIAR 366

Query: 158 ---DLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKM 190
              D + G+VI  V   D D G    VT  L  PY K+
Sbjct: 367 ISEDASVGAVIAHVVVIDRDSGMNGYVTCMLDYPYFKI 404


>gi|444525563|gb|ELV14089.1| Protocadherin gamma-C4 [Tupaia chinensis]
          Length = 865

 Score = 67.8 bits (164), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 64/230 (27%), Positives = 102/230 (44%), Gaps = 22/230 (9%)

Query: 13  LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKP 72
           LV+ A+   N  R   A L VS    +     F ++ Y +S LE+ P   VL+ +  + P
Sbjct: 210 LVLTAVDGGNPPRSGTAELRVSVLDVNDNAPAFQQSSYRISVLESAPAGMVLIQLNASDP 269

Query: 73  RDL----RVKYWLSNDYGER----FSI-SRQGDISLMQCLDYETEDSYRFTVYATD---T 120
            DL     V +  S    +R    FS+    G ++L   LD+E+E+ Y F V A D    
Sbjct: 270 -DLGPSGNVTFSFSGHTPDRVRNLFSLHPTTGKLTLQGPLDFESENYYEFDVRARDGGSP 328

Query: 121 LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVT 180
            M    ++ + +++VND  P          LP        PG+V+  +   D D G    
Sbjct: 329 AMEQHCSLRVDLLDVNDNAPHITVTSELGTLPE----SAEPGTVVALISVQDPDSGSNGD 384

Query: 181 LSLRGPYEKMFSINDS--GHISIVDLSALN---TSTIQLVVVATDTGNPP 225
           +SLR P    F++  +     S+V    L+    ++  ++V A+D GNPP
Sbjct: 385 VSLRIPDHLPFALKSAFKNQFSLVTAGPLDREAKASYDIMVTASDAGNPP 434



 Score = 47.4 bits (111), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 45/169 (26%), Positives = 78/169 (46%), Gaps = 27/169 (15%)

Query: 77  VKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVV 133
           + + L + +  +FS+   G       LD E + SY   V A+D     ++T  T+ +++ 
Sbjct: 393 LPFALKSAFKNQFSLVTAGP------LDREAKASYDIMVTASDAGNPPLSTHRTIFLNIS 446

Query: 134 NVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMF 191
           +VND  P F    +E+F+P     +  PG ++  + A+D D G    ++ SL  P  +  
Sbjct: 447 DVNDNPPSFFQRSHEVFVPE----NNRPGDLLCSLAASDPDSGLNSLISYSLLEPRNR-- 500

Query: 192 SINDSGHISIVDLSAL----------NTSTIQLVVVATDTGNPPRQASV 230
            ++ S  IS+   +             T T+Q  V A D GNPP  ++V
Sbjct: 501 DVSASSFISLNPQTGAVHATRSFDYEQTQTLQFEVQARDRGNPPLSSTV 549



 Score = 43.9 bits (102), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 49/190 (25%), Positives = 83/190 (43%), Gaps = 15/190 (7%)

Query: 95  GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYE--L 149
           G +   +  DYE   + +F V A D     ++++ TV + V+++ND  P    P+     
Sbjct: 515 GAVHATRSFDYEQTQTLQFEVQARDRGNPPLSSTVTVRLFVLDLNDNAPAVLRPRARPGS 574

Query: 150 FLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIND-SGHISIVDLS 205
             P      +  G ++ KV A D D G    +S   L  P   +F+++  +G +      
Sbjct: 575 LCPQALPPSVGAGHLVTKVTAVDLDSGYNAWVSYQLLEAPDPSLFAVSRYAGEVRTAVPI 634

Query: 206 ALNTSTIQLVVVATDTGNPPRQASVPAIMHFPE---AIVQ--QASSKLNSGTSSTVLIIL 260
             +    +LV+V  D+G+PP   SV  ++   E    +V   + SS    G S   L  L
Sbjct: 635 PADLPPQKLVIVVKDSGSPPLSTSVTLLVSLEEDTHPVVPDLRESSAPREGESRLTL-YL 693

Query: 261 GVVLIVLGFV 270
            V L+ + FV
Sbjct: 694 AVSLVAICFV 703


>gi|74150066|dbj|BAE24351.1| unnamed protein product [Mus musculus]
          Length = 1069

 Score = 67.8 bits (164), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 62/203 (30%), Positives = 92/203 (45%), Gaps = 21/203 (10%)

Query: 37  GTSLRELQFSKNEYSVSALENLPVNYV--LLTVTTNKPRDLRVKYWLSNDYGERFSIS-R 93
           G S+ E+ F +N        N+P   V  +L    +  ++  + Y L +     F+I   
Sbjct: 536 GQSVVEVYFPEN--------NIPGERVATVLATDADSGKNAEIAYSLDSSVMGTFAIDPD 587

Query: 94  QGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELF 150
            GDI +   LD E  D Y F V A D    ++  S TV + V + ND DP+F    +  +
Sbjct: 588 SGDILVNTVLDREQTDRYEFKVNAKDKGIPVLQGSTTVIVQVADKNDNDPKFMQDVFTFY 647

Query: 151 LPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSI-NDSGHI-SIVDLSAL 207
           +      +L P S +G V   D DKG    +SL       +FSI ND+G I S +     
Sbjct: 648 VKE----NLQPNSPVGMVTVMDADKGRNAEMSLYIEENSNIFSIENDTGTIYSTMSFDRE 703

Query: 208 NTSTIQLVVVATDTGNPPRQASV 230
           + +T    V A D G+PPR A+ 
Sbjct: 704 HQTTYAFRVKAVDGGDPPRSATA 726



 Score = 45.4 bits (106), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 78/316 (24%), Positives = 133/316 (42%), Gaps = 46/316 (14%)

Query: 30  TLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVT---TNKPRDLRVKYWLSNDYG 86
           T+IV  A  +  + +F ++ ++    ENL  N  +  VT    +K R+  +  ++  +  
Sbjct: 624 TVIVQVADKNDNDPKFMQDVFTFYVKENLQPNSPVGMVTVMDADKGRNAEMSLYIEEN-S 682

Query: 87  ERFSISRQ-GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRF 142
             FSI    G I      D E + +Y F V A D      + +ATV++ V++ ND  P  
Sbjct: 683 NIFSIENDTGTIYSTMSFDREHQTTYAFRVKAVDGGDPPRSATATVSLFVMDENDNAPTV 742

Query: 143 RYPQ---YELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIND- 195
             P+   Y L  P   +      +V+  V A D D G    L+   + G   K+F I+  
Sbjct: 743 TLPRNISYTLLPPSSNVR-----TVVATVLATDSDDGINADLNYSIVGGNPFKLFEIDST 797

Query: 196 SGHISIV-DLSALNTSTIQLVVVATDTGNPPRQA----------SVPAIMHFPEAIVQQA 244
           SG +S+V  L+  +    +LVV   D+G P +            SV         IV+  
Sbjct: 798 SGVVSLVGKLTQKHYGLHRLVVQVNDSGQPSQSTTTLVHVFVNESVSNATVIDSQIVRSL 857

Query: 245 SSKLNSG---------TSSTVLIILGVVLIVLGFVIILLILYIHKNKHTKN-NGPPGSSH 294
            + L            +   + I++GVV  ++  ++I+LI+ + +   +KN NG      
Sbjct: 858 HTPLTQDIAGDPSYEISKQRLSIVIGVVAGIMTVILIILIVMMARYCRSKNKNGYEAGKK 917

Query: 295 SKNDSFLSNVILPEKH 310
              D F      P++H
Sbjct: 918 DHEDFF-----TPQQH 928



 Score = 40.8 bits (94), Expect = 0.98,   Method: Compositional matrix adjust.
 Identities = 40/160 (25%), Positives = 71/160 (44%), Gaps = 26/160 (16%)

Query: 93  RQGDISLMQCLDYETEDSYRFTVY---ATDTLMTTSATVNISVVNVNDWDPRFRYPQYEL 149
           +Q  + +   LD E  DSY  T+      D   ++ A + + + +VND  PRF    YE 
Sbjct: 256 KQPQLIVKGALDREQRDSYELTLRVRDGGDPPRSSQAILRVLITDVNDNSPRFEKSVYEA 315

Query: 150 FLPHIPLADLTPGSVIGKVEAADGDKG---------DRVTLSLRGPYEKMFSIND-SGHI 199
            L      +  PG+ I ++ A D D G            T S+R    ++  +++ SG +
Sbjct: 316 DLAE----NSAPGTPILQLRATDLDVGVNGQIEYVFGAATESVR----RLLRLDETSGWL 367

Query: 200 SI---VDLSALNTSTIQLVVVATDTGNPPRQASVPAIMHF 236
           S+   +D   +N   ++  V+A D G PP+      +++ 
Sbjct: 368 SVLHRIDREEVN--QLRFTVMARDRGQPPKTDKATVVLNI 405


>gi|344251460|gb|EGW07564.1| Protocadherin-7 [Cricetulus griseus]
          Length = 972

 Score = 67.8 bits (164), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 62/203 (30%), Positives = 92/203 (45%), Gaps = 21/203 (10%)

Query: 37  GTSLRELQFSKNEYSVSALENLPVNYV--LLTVTTNKPRDLRVKYWLSNDYGERFSIS-R 93
           G S+ E+ F +N        N+P   V  +L    +  ++  + Y L +     F+I   
Sbjct: 439 GQSVVEVYFPEN--------NIPGERVATVLATDADSGKNAEIAYSLDSSVMGTFAIDPD 490

Query: 94  QGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELF 150
            GDI +   LD E  D Y F V A D    ++  S TV + V + ND DP+F    +  +
Sbjct: 491 SGDILVNTVLDREQTDRYEFKVNAKDKGIPVLQGSTTVIVQVADKNDNDPKFMQDVFTFY 550

Query: 151 LPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSI-NDSGHI-SIVDLSAL 207
           +      +L P S +G V   D DKG    +SL       +FSI ND+G I S +     
Sbjct: 551 VKE----NLQPNSPVGMVTVMDADKGRNAEMSLYIEENSNIFSIENDTGTIYSTMSFDRE 606

Query: 208 NTSTIQLVVVATDTGNPPRQASV 230
           + +T    V A D G+PPR A+ 
Sbjct: 607 HQTTYTFRVKAVDGGDPPRSATA 629



 Score = 45.1 bits (105), Expect = 0.064,   Method: Compositional matrix adjust.
 Identities = 78/316 (24%), Positives = 133/316 (42%), Gaps = 46/316 (14%)

Query: 30  TLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVT---TNKPRDLRVKYWLSNDYG 86
           T+IV  A  +  + +F ++ ++    ENL  N  +  VT    +K R+  +  ++  +  
Sbjct: 527 TVIVQVADKNDNDPKFMQDVFTFYVKENLQPNSPVGMVTVMDADKGRNAEMSLYIEEN-S 585

Query: 87  ERFSISRQ-GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRF 142
             FSI    G I      D E + +Y F V A D      + +ATV++ V++ ND  P  
Sbjct: 586 NIFSIENDTGTIYSTMSFDREHQTTYTFRVKAVDGGDPPRSATATVSLFVMDENDNAPTV 645

Query: 143 RYPQ---YELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-D 195
             P+   Y L  P   +      +V+  V A D D G    L+   + G   K+F I+  
Sbjct: 646 TLPRNISYTLLPPSSNVR-----TVVATVLATDSDDGINADLNYSIVGGNPFKLFEIDPT 700

Query: 196 SGHISIV-DLSALNTSTIQLVVVATDTGNPPRQA----------SVPAIMHFPEAIVQQA 244
           SG +S+V  L+  +    +LVV   D+G P +            SV         IV+  
Sbjct: 701 SGVVSLVGKLTQKHYGLHRLVVQVNDSGQPSQSTTTLVHVFVNESVSNATVIDSQIVRSL 760

Query: 245 SSKLNSG---------TSSTVLIILGVVLIVLGFVIILLILYIHKNKHTKN-NGPPGSSH 294
            + L            +   + I++GVV  ++  ++I+LI+ + +   +KN NG      
Sbjct: 761 HTPLTQDIAGDPSYEISKQRLSIVIGVVAGIMTVILIILIVMMARYCRSKNKNGYEAGKK 820

Query: 295 SKNDSFLSNVILPEKH 310
              D F      P++H
Sbjct: 821 DHEDFF-----TPQQH 831



 Score = 42.7 bits (99), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 41/150 (27%), Positives = 69/150 (46%), Gaps = 26/150 (17%)

Query: 93  RQGDISLMQCLDYETEDSYRFTVY---ATDTLMTTSATVNISVVNVNDWDPRFRYPQYEL 149
           +Q  + +   LD E  DSY  T+      D   ++ A + + + +VND  PRF    YE 
Sbjct: 159 KQPQLIVKGALDREQRDSYELTLRVRDGGDPPRSSQAILRVLITDVNDNSPRFEKSVYEA 218

Query: 150 FLPHIPLADLTPGSVIGKVEAADGDKG---------DRVTLSLRGPYEKMFSIND-SGHI 199
            L      +  PG+ I ++ AAD D G            T S+R    ++  +++ SG +
Sbjct: 219 DLAE----NSAPGTPILQLRAADLDVGVNGQIEYVFGAATESVR----RLLRLDETSGWL 270

Query: 200 SI---VDLSALNTSTIQLVVVATDTGNPPR 226
           S+   +D   +N   ++  V+A D G PP+
Sbjct: 271 SVLHRIDREEVN--QLRFTVMARDRGQPPK 298


>gi|432896618|ref|XP_004076349.1| PREDICTED: protocadherin-16-like [Oryzias latipes]
          Length = 3296

 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 59/188 (31%), Positives = 97/188 (51%), Gaps = 14/188 (7%)

Query: 51   SVSALENLPVNYVLLTVTT---NKPRDLRVKYWL-SNDYGERFSIS-RQGDISLMQCLDY 105
            ++S +E+ PV +V+L V     ++  + RV Y + S +   RFS+S   G +S+++ LD 
Sbjct: 1549 AISVMEDQPVGFVILHVMAHDADEGENGRVSYRIQSGNNAGRFSLSPNTGSLSILKALDR 1608

Query: 106  ETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPG 162
            E ++ +  T+ A D     ++TS  + + V++VND  P F   Q   F  H+ + +  PG
Sbjct: 1609 EEQEVFNLTIVAEDHGIPQLSTSQVLCVQVIDVNDEAPMF---QQAEFGTHV-MENKGPG 1664

Query: 163  SVIGKVEAADGDKGDRVTLSLRGPYEKMFSIND-SGHISIV-DLSALNTSTIQLVVVATD 220
            + + KV A D D+G    ++  G  E  F IN  +G I+   +L A   +   L V A D
Sbjct: 1665 TTVLKVTATDRDQGSNGHITYGGVTEDGFVINPLTGVITTTKELDAELQNHYVLTVYARD 1724

Query: 221  TGNPPRQA 228
             G PP  A
Sbjct: 1725 GGLPPNFA 1732



 Score = 61.2 bits (147), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 73/251 (29%), Positives = 101/251 (40%), Gaps = 39/251 (15%)

Query: 14   VVRAIQYDNQDRYALA---------------TLIVSKAGTSLRELQFSKNEYSVSALENL 58
            ++ ++ YD+  RY L                TL+V       +   F    Y V   EN 
Sbjct: 953  LIGSLSYDSVPRYDLQVIAKDGGAPQLSSTFTLVVHIQAQDAQGPNFDTLTYRVELRENA 1012

Query: 59   PVNYVLLTVTT-NKPRDLRVKYWLSNDYGERFSISRQGDIS------------LMQCLDY 105
            P+N   L V   N+          S      + +   GD +            +   LD 
Sbjct: 1013 PLNTRFLQVRALNREASGNGGSSSSISSSISYRLRPDGDAAGFGIMPDSGWLFVRSSLDR 1072

Query: 106  ETEDSYRFTVYATD----TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTP 161
            E +D Y  TV AT     T  T SATV ++V + ND  PR    Q  +FL      +L  
Sbjct: 1073 EAKDMYLLTVLATSRHSGTGRTGSATVRVTVTDENDNSPRLS--QERVFL--AVRENLVA 1128

Query: 162  GSVIGKVEAADGDKGDRVTLSLRGPY-EKMFSIN-DSGHISI-VDLSALNTSTIQLVVVA 218
            G+  G+V A D D G    L+ R  + +K F IN  +G IS  + L     S+ QL VV 
Sbjct: 1129 GTGFGRVSATDRDAGLNARLTYRLLHADKHFQINSQTGEISTRLALDREQQSSYQLFVVV 1188

Query: 219  TDTGNPPRQAS 229
             D G PPR A+
Sbjct: 1189 QDGGTPPRSAT 1199



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 60/195 (30%), Positives = 95/195 (48%), Gaps = 16/195 (8%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGERFSISRQ-GDISLM 100
            FSKN Y+V  LEN    Y +L V+    ++  + ++ Y+LS +    F++    G I+  
Sbjct: 1854 FSKNSYTVEVLENAEEGYQVLQVSATDVDEGLNGKILYFLSQEADGAFAVDEDTGRITTA 1913

Query: 101  QCLDYETEDSYRFTVYATD----TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
              LD E   SY F V+A D      + +SA V +++++VND  P F   Q  L    I +
Sbjct: 1914 APLDREKLASYNFRVFAVDLSPSVPINSSAQVKVTILDVNDNAPFFI--QDPLI---IEV 1968

Query: 157  ADLTPGSVIGKVEAADGDKGDRVTLSLRGPYE-KMFSIND-SGHISIVD-LSALNTSTIQ 213
            +      V+  ++A D D G   ++  R     K FSIN  +G I   + L +L  +   
Sbjct: 1969 SSRRSQRVLATMKAEDKDFGANGSVFYRFATPVKGFSINSLTGEIQATEPLGSLTQAQRT 2028

Query: 214  LVVVATDTGNPPRQA 228
            L+V A D G+P + A
Sbjct: 2029 LIVEAMDQGSPAQSA 2043



 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/144 (31%), Positives = 72/144 (50%), Gaps = 12/144 (8%)

Query: 88   RFSISR-QGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQ 146
            +F I R  G +S+   LD+E +  Y  TV ATD+   T A + I V ++ND  P F +  
Sbjct: 2314 KFGIHRYTGGVSITGPLDFEEKTWYTVTVQATDSQHQTEANITIVVEDINDNAPLFTHDL 2373

Query: 147  YELFLP-HIPLADLTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSINDSGHISIVD 203
            Y++ LP H P     PGS +  V A D D G+  RV   +    ++ F I+ S     ++
Sbjct: 2374 YQISLPEHTP-----PGSAVITVTATDRDSGENGRVNYRVMSSTQEGFYIDPSNGTLFIN 2428

Query: 204  LSAL---NTSTIQLVVVATDTGNP 224
              A       ++ +V+ A+D G+P
Sbjct: 2429 HRAEFDPERPSVNIVIEASDGGSP 2452



 Score = 51.6 bits (122), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 62/192 (32%), Positives = 94/192 (48%), Gaps = 21/192 (10%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVT-TNKPRDL--RVKYWLSNDYGER----FSISRQ-GD 96
           FS N Y+VS  EN P     L V+ T++ R     + Y L+   G      F+I++Q G 
Sbjct: 573 FSSNFYNVSVKENTPAGTCFLEVSATDEDRGSFGTITYALTLKSGGTVQTPFTINKQTGQ 632

Query: 97  ISLMQCLDY-ETEDSYRFTVYATDTLMTTSAT-VNISVVNVNDWDPRFRYPQYELFLPHI 154
           +     LD  E  + Y  TV ATD    +SA  V + V+++ND  P F YP     L  +
Sbjct: 633 LCTASALDRDEGLEKYDLTVTATDGGGLSSAVGVRVKVMDINDNRPTF-YP----VLYTV 687

Query: 155 PLADLT-PGSVIGKVEAADGDKGDRVTLSLR---GPYEKMFSIN-DSGHISIV-DLSALN 208
            L+  + PG+ + KV A D D G+   ++ R   G     F++N D+G IS+   L +  
Sbjct: 688 SLSTHSAPGTSVVKVTANDPDAGENGRITYRTVPGGSSPFFTLNKDTGVISLSRSLHSKA 747

Query: 209 TSTIQLVVVATD 220
            + I +V+ A D
Sbjct: 748 NTVISMVITAVD 759



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 48/139 (34%), Positives = 69/139 (49%), Gaps = 18/139 (12%)

Query: 97  ISLMQCLDYETEDSYRFTVYATDTL---MTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
           I + Q LD E  DSY   V ATD+    +   ++  I V +VND  P F    Y   +P 
Sbjct: 422 IYVDQVLDREERDSYDLRVMATDSGTPPLRAESSFTIQVTDVNDNPPLFDQQAYRQTIPE 481

Query: 154 IPLADLTPGSVIGKVEAADGDKGD----RVTLSLRGPYEKMFSINDSGHISIVDLSALNT 209
           +    + PGS + +V A D D+G     R +L L+G  +K FSI+    I I   +AL+ 
Sbjct: 482 V----VYPGSFVLQVTARDKDQGPNGDVRYSL-LKG--KKWFSIDPITGI-ITTATALDF 533

Query: 210 STI---QLVVVATDTGNPP 225
            +     + V+ATD G PP
Sbjct: 534 ESEPAPSVTVIATDGGRPP 552



 Score = 47.8 bits (112), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 65/270 (24%), Positives = 116/270 (42%), Gaps = 26/270 (9%)

Query: 21   DNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNY---VLLTVTTNKPRDLRV 77
            D Q  +AL  +IV     +     F     + +  ENLP N    VL  +  +     ++
Sbjct: 2670 DGQGYFALVPVIVDVKDVNDNHPYFPVETLTATIQENLPANSPVTVLHAIDHDTGVFGQL 2729

Query: 78   KYWLSNDYG---ERFSISR-QGDISLMQCLDYETEDSYRFTVYATDTL-MTTSATVNISV 132
            KY++    G   + F I +  G++      D+E  +S+ F   A D+   + + TV + V
Sbjct: 2730 KYYMMERSGSGRDSFVIEQNSGEVRSKIPFDFEKINSFNFVAVAVDSGNHSATVTVQVFV 2789

Query: 133  VNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG-DRVTLSLRGPYEKMF 191
               +++DP F    +   +P         G  IG+V A D D G D + L    P    F
Sbjct: 2790 TGEDEYDPLFTSTDFAFEVPE----GAKKGQSIGQVLARDEDGGVDGIVLYSLLPSSPYF 2845

Query: 192  SINDSGHISIVDLSALNTSTIQLVVVATDTGNPPRQASVPAIMHFPEAIVQQASSKL--- 248
             +N +  +  + L + ++S+      +  T    R  ++    H P    + A +++   
Sbjct: 2846 DVNKTTGVIFLKLDSSSSSS-----GSGRTKRETRLMTLEVKAHGPHDTSRSAVAQISID 2900

Query: 249  ----NSGTSSTVLIILGVVLIV-LGFVIIL 273
                N G +S V ++L V++ V LGF+I+L
Sbjct: 2901 VTNTNFGLASDVNVLLIVIIAVSLGFIILL 2930



 Score = 47.4 bits (111), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 69/148 (46%), Gaps = 12/148 (8%)

Query: 87   ERFSISRQ-GDISLMQCLDYETEDSYRFTVYATDTLM---TTSATVNISVVNVNDWDPRF 142
            + F I+ Q G+IS    LD E + SY+  V   D      + + T +ISV++ ND  P F
Sbjct: 1157 KHFQINSQTGEISTRLALDREQQSSYQLFVVVQDGGTPPRSATGTAHISVLDENDHAPTF 1216

Query: 143  RY--PQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTL--SLRGPYEKMFSIN-DSG 197
             +  P  E     I    L  G+++G V A D D+G+  T+  SL G   + FS+N ++G
Sbjct: 1217 THVRPDTERMFEII--EGLPSGTMVGSVAAKDPDEGENGTVYYSLSGSRVERFSLNPNTG 1274

Query: 198  HISIVD-LSALNTSTIQLVVVATDTGNP 224
             +     L     +     + A D G P
Sbjct: 1275 ELKTASPLRWAERAEYTFTLTAADHGTP 1302



 Score = 43.9 bits (102), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 63/226 (27%), Positives = 98/226 (43%), Gaps = 19/226 (8%)

Query: 12   TLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNK 71
            TL+V A+   +  + A   ++V         ++FSKN   VS  EN      +       
Sbjct: 2028 TLIVEAMDQGSPAQSAHGVVVVYVKEVEYNGIRFSKNARDVSIQENASKGTAVAQAQAEY 2087

Query: 72   PRDLR--VKYWL-SNDYGERFSISRQ-GDISLMQC--LDYETEDSYRFTVYATDTLMTTS 125
            P   R  + Y L S +    F IS   G+I +     LD+E     R  V A     T+ 
Sbjct: 2088 PDGTRQGISYSLFSGNKKHLFKISSSTGEIWVESSNGLDFEETPRLRLVVKAETVSSTSF 2147

Query: 126  ATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGD--RVTLSL 183
               N+ + +VND  PRF+   Y  F+      ++     I +V A D D+G   +VT S+
Sbjct: 2148 MAFNLVLQDVNDNLPRFQLQNYVAFMKEAQGYEMP----IIQVVAEDVDQGQNGQVTYSI 2203

Query: 184  R-GPYEKMFSIND-SGHI---SIVDLSALNTSTIQLVVVATDTGNP 224
            +      +F I+  +G I   +I+D      +  +LVV ATD G+P
Sbjct: 2204 QSSSMSGLFKIDPVTGSITTTAIMDREIFTQT--KLVVTATDRGSP 2247



 Score = 40.0 bits (92), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 50/164 (30%), Positives = 74/164 (45%), Gaps = 29/164 (17%)

Query: 75  LRVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDTL---MTTSATVNIS 131
           L+ K W S D          G I+    LD+E+E +   TV ATD     ++++A V+I 
Sbjct: 510 LKGKKWFSID-------PITGIITTATALDFESEPAPSVTVIATDGGRPPLSSTAKVDIV 562

Query: 132 VVNVNDWDPRFRYPQYELFLPHIPLADLTP-GSVIGKVEAADGDKGD------RVTLSLR 184
           V +VND  P F    Y     ++ + + TP G+   +V A D D+G        +TL   
Sbjct: 563 VQDVNDNAPVFSSNFY-----NVSVKENTPAGTCFLEVSATDEDRGSFGTITYALTLKSG 617

Query: 185 GPYEKMFSIN-DSGHISIVDLSALNT----STIQLVVVATDTGN 223
           G  +  F+IN  +G +     SAL+         L V ATD G 
Sbjct: 618 GTVQTPFTINKQTGQLCTA--SALDRDEGLEKYDLTVTATDGGG 659



 Score = 38.5 bits (88), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 64/238 (26%), Positives = 101/238 (42%), Gaps = 26/238 (10%)

Query: 12  TLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTV---T 68
           +LV+ A    +  R    TL V+    +     F+++ Y     E+LP    +L V    
Sbjct: 220 SLVIEAFDGGSPRRVGFMTLEVTVTDINDHAPVFNQSRYHAIISESLPQGSSILQVFAAD 279

Query: 69  TNKPRDLRVKYWLSNDYG--ERFSIS--RQGDISLMQCLDYETEDSYRFTVYATDTLM-- 122
            ++  +  V Y ++      ER+ +   + G I+L + LDYE +  +   V A D     
Sbjct: 280 EDEGDNGLVLYEINRRQSDPERYFVIDLKSGVITLNRPLDYELKRVHELVVQARDNASQP 339

Query: 123 -TTSATVNISVVNVNDWDPRFRYPQYELFL-----PHIPLADLTPGSVIGKVEAADGDKG 176
             T+A V I V + ND  P        +FL     P I      PG  + ++   D D G
Sbjct: 340 EVTNAFVTIHVRDFNDNQPTMTI----IFLSEDGSPRISEG-AQPGQYVARISVTDPDYG 394

Query: 177 D--RVTLSLRGPYEKM-FSINDSG-HISIVD--LSALNTSTIQLVVVATDTGNPPRQA 228
           +   V +SL G   K   +  DS  ++  VD  L      +  L V+ATD+G PP +A
Sbjct: 395 EYANVNVSLEGGDGKFALTTKDSIIYLIYVDQVLDREERDSYDLRVMATDSGTPPLRA 452


>gi|297664216|ref|XP_002810567.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 2 [Pongo
           abelii]
          Length = 2958

 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 71/219 (32%), Positives = 102/219 (46%), Gaps = 22/219 (10%)

Query: 25  RYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWL 81
           R ALATL +    T+  +  F + EY  S  ENL V Y +LTV     + P +  + Y L
Sbjct: 304 RSALATLTILVTDTNDHDPVFEQQEYKESLRENLEVGYEVLTVRATDGDAPPNANILYRL 363

Query: 82  SNDYG----ERFSIS-RQGDISLMQCLDYETEDSYRFTVYATDT-----LMTTSATVNIS 131
               G    E F I  R G I     +D E  +SY+ TV A+D        +T+A V +S
Sbjct: 364 LEGSGGSPSEVFEIDPRSGVIRTRGPVDREEVESYQLTVEASDQGRDPGPRSTTAAVFLS 423

Query: 132 VVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYE 188
           V + ND  P+F   +Y + +      D+TPGS + +V A+D DKG    +    + G   
Sbjct: 424 VEDDNDNAPQFSEKRYVVQV----REDVTPGSPVLRVTASDRDKGSNALVHYSIMSGNAR 479

Query: 189 KMFSIN-DSGHISIVD-LSALNTSTIQLVVVATDTGNPP 225
             F ++  +G + +V  L    T    L V A D G PP
Sbjct: 480 GQFYLDAQTGALDVVSPLDYETTKEYTLRVRAQDGGRPP 518



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 50/171 (29%), Positives = 80/171 (46%), Gaps = 15/171 (8%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGERFSIS---RQGDIS 98
           F    +  + LE++P+ Y++L V     +   + R++Y L+   G  F  +     G IS
Sbjct: 540 FVSTPFQATVLESVPLGYLVLHVQAIDADAGDNARLEYRLAG-VGHDFPFTINNGTGWIS 598

Query: 99  LMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIP 155
           +   LD E  D Y F V A D     +T SA+V+++V++VND +P F  P+Y + L    
Sbjct: 599 VAAELDREEVDFYSFGVEARDHGTPALTASASVSVTVLDVNDNNPTFTQPEYTVRLNE-- 656

Query: 156 LADLTPGSVIGKVEAADGDKGDRVTLSL-RGPYEKMFSINDSGHISIVDLS 205
             D   G+ +  V A D D    +T  +  G     FSI       +V L+
Sbjct: 657 --DAAVGTSVVTVSAVDRDAHSVITYQITSGNTRNRFSITSQSGGGLVSLA 705



 Score = 44.3 bits (103), Expect = 0.089,   Method: Compositional matrix adjust.
 Identities = 50/189 (26%), Positives = 86/189 (45%), Gaps = 14/189 (7%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRDLR--VKYWL-SNDYGERFSISRQ---GDIS 98
           F++ EY+V   E+  V   ++TV+    RD    + Y + S +   RFSI+ Q   G +S
Sbjct: 645 FTQPEYTVRLNEDAAVGTSVVTVSAVD-RDAHSVITYQITSGNTRNRFSITSQSGGGLVS 703

Query: 99  LMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLAD 158
           L   LDY+ E  Y   V A+D     +A + ++V + N   P F+   Y + +      D
Sbjct: 704 LALPLDYKLERQYVLAVTASDGTRQDTAQIVVNVTDANTHRPVFQSSHYTVNVNE----D 759

Query: 159 LTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSINDSGHISI-VDLSALNTSTIQLV 215
              G+ +  + A D D G+  R+T  +     +     D+G ++   +L   +  +  L 
Sbjct: 760 RPAGTTVVLISATDEDTGENARITYFMEDSIPQFRIDADTGAVTTQAELDYEDQVSYTLA 819

Query: 216 VVATDTGNP 224
           + A D G P
Sbjct: 820 ITARDNGIP 828



 Score = 44.3 bits (103), Expect = 0.093,   Method: Compositional matrix adjust.
 Identities = 40/149 (26%), Positives = 69/149 (46%), Gaps = 10/149 (6%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWL-SNDYGERFSIS-RQGDISL 99
            F ++E+ V   EN P+   +  VT   P +    ++ Y +   +  E F +    G+++ 
Sbjct: 956  FEQDEFDVFVEENSPIGLAVARVTATDPDEGTNAQIMYQIVEGNIPEVFQLDIFSGELTA 1015

Query: 100  MQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPH--IPLA 157
            +  LDYE    Y   + AT   + + ATV++ +++ ND  P      +E+   +     +
Sbjct: 1016 LVDLDYEDRPEYVLVIQATSAPLVSRATVHVRLLDRNDNPPVLG--NFEILFNNYVTNRS 1073

Query: 158  DLTPGSVIGKVEAADGDKGDRVTLSL-RG 185
               PG  IG+V A D D  D +T S  RG
Sbjct: 1074 SSFPGGAIGRVPAHDPDISDSLTYSFERG 1102


>gi|332030986|gb|EGI70612.1| Protein dachsous [Acromyrmex echinatior]
          Length = 2470

 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 74/239 (30%), Positives = 103/239 (43%), Gaps = 27/239 (11%)

Query: 14  VVRAIQYDNQDRYALATLIVSKAGTSLR-----ELQ--------FSKNEYSVSALENLPV 60
           + + + Y+ Q R+ L    +  AG S       E+Q        F +NEY V   E   +
Sbjct: 86  LAKRLDYETQQRHGLLISALDGAGLSANLSLSVEVQDVNDNPPVFERNEYHVEVPEGARL 145

Query: 61  NYVLLTVTT---NKPRDLRVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYA 117
           +  +L VT    +   + R+ Y L      R S    G I L Q LD E  D +  TV A
Sbjct: 146 DSQILQVTAVDLDTGNNARLSYRLQGSTAFRIS-PNTGWIYLAQSLDREILDRHTLTVLA 204

Query: 118 TDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGD 174
            D      T SA+V + V++ ND DPRF    Y   L    L +L  G+V+G V A D D
Sbjct: 205 IDNGSPAATASASVLVMVLDDNDNDPRFEKDFYGFEL----LENLPSGTVVGSVSAIDPD 260

Query: 175 KGDRVTLSLRG-PYEKMFSIN-DSGHISIVD-LSALNTSTIQLVVVATDTGNPPRQASV 230
            G    L          F+++ D+G I   + L     S  +LV+ A D G P R A V
Sbjct: 261 IGKNSLLRYTVVQANSSFTVDPDTGEIITREPLDRETKSVHELVLEARDQGTPSRAARV 319



 Score = 54.7 bits (130), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 59/198 (29%), Positives = 95/198 (47%), Gaps = 19/198 (9%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPR---DLRVKYWLSNDYGERFSISR-QGDISLM 100
            +  ++Y  +  E++P +  +++V    P    + ++ Y ++ +    F +    G ++  
Sbjct: 982  YYPSKYMTTISEDVPPDSSVMSVKAIDPDQGVNGKITYAIAEETSWLFRVDNLTGVVTTA 1041

Query: 101  QCLDYETEDSYRFTVYATDTLM----TTSATVNISVVNVNDWDPRFR-YPQYELFLPHIP 155
              LD E + +Y F V ATD+ M     TS  V I + ++ND  P F  YP    F   +P
Sbjct: 1042 GPLDRERQSNYTFLVVATDSGMYDAKRTSIPVEIIISDINDNAPIFEEYP----FRTRVP 1097

Query: 156  LADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEK-MFSINDS-GHISI-VDLSALNTS 210
            ++   PG  I +V A D D G    +  SL    EK  F I+ S G ++  + LS  N  
Sbjct: 1098 IS-TKPGQNILRVSAKDADDGVNGDIVYSLINEQEKPKFRIHPSTGEVTASLSLSQDNGK 1156

Query: 211  TIQLVVVATDTGNPPRQA 228
            T  L V+A D GNPP+ A
Sbjct: 1157 TYYLEVLAQDKGNPPKCA 1174



 Score = 54.3 bits (129), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 56/199 (28%), Positives = 92/199 (46%), Gaps = 15/199 (7%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWLSNDYGERFSI-SRQGDISLM 100
           F  N   +S  E+ P++  L       P     L ++Y L  +    F I  R G++ L 
Sbjct: 28  FRTNTVRISVPESHPLHVPLYVAHATDPDITPLLPIRYILGQNSNNLFGIDERTGELYLA 87

Query: 101 QCLDYETEDSYRFTVYATDTL-MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADL 159
           + LDYET+  +   + A D   ++ + ++++ V +VND  P F   +Y + +P     D 
Sbjct: 88  KRLDYETQQRHGLLISALDGAGLSANLSLSVEVQDVNDNPPVFERNEYHVEVPEGARLD- 146

Query: 160 TPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSIN-DSGHISI---VDLSALNTSTIQLV 215
              S I +V A D D G+   LS R      F I+ ++G I +   +D   L+  T  L 
Sbjct: 147 ---SQILQVTAVDLDTGNNARLSYRLQGSTAFRISPNTGWIYLAQSLDREILDRHT--LT 201

Query: 216 VVATDTGNPPRQASVPAIM 234
           V+A D G+P   AS   ++
Sbjct: 202 VLAIDNGSPAATASASVLV 220



 Score = 51.6 bits (122), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 58/234 (24%), Positives = 112/234 (47%), Gaps = 23/234 (9%)

Query: 12  TLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNK 71
           TL V AI   +    A A+++V     +  + +F K+ Y    LENLP   V+ +V+   
Sbjct: 199 TLTVLAIDNGSPAATASASVLVMVLDDNDNDPRFEKDFYGFELLENLPSGTVVGSVSAID 258

Query: 72  P---RDLRVKYWLSNDYGERFSISRQ-GDISLMQCLDYETEDSYRFTVYATDTLMTTSA- 126
           P   ++  ++Y +       F++    G+I   + LD ET+  +   + A D    + A 
Sbjct: 259 PDIGKNSLLRYTVVQ-ANSSFTVDPDTGEIITREPLDRETKSVHELVLEARDQGTPSRAA 317

Query: 127 --TVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR 184
             ++ ++V++VND  P    PQ ++        +  PG+ + +V A D D G+  +++  
Sbjct: 318 RVSLKVTVLDVNDNSPEIVDPQGDVVSVR---EEQPPGTEVARVRAMDMDLGENASVTYS 374

Query: 185 GPYEK------MFSIND-SGHI---SIVDLSALNTSTIQLVVVATDTGNPPRQA 228
            P ++      +F+I+  +G I   +++D    N    ++ + ATD G+PPR +
Sbjct: 375 IPKDRDSDGYNVFTIDPITGMIRTKAVLDHEERN--VYRVSIRATDAGHPPRHS 426



 Score = 48.9 bits (115), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 78/316 (24%), Positives = 126/316 (39%), Gaps = 59/316 (18%)

Query: 27   ALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYG 86
            ALA+L V     +    +F  +EY     EN P+  V+ +    +  DL    + S +Y 
Sbjct: 1831 ALASLRVYLEDVNDNSPKFPVSEYLEFVGENEPIGTVVFSA---RASDLDRGIFGSLNYS 1887

Query: 87   ---------------ERFSISRQGDISLMQCLDYETEDSYRFTVYATDTLMTTSAT-VNI 130
                           + F++   G +      DYE  + Y FT+ ATD    T+A  V +
Sbjct: 1888 IISAASGFSDIDDSWKLFAVDETGTVITRAVFDYEQRNRYAFTLRATDAGGRTAAVRVRV 1947

Query: 131  SVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSL--RGP 186
             + + +++ P+F    Y      I      PG+VIG V A D DKG   RV   L  + P
Sbjct: 1948 EIDSRDEFFPQFTERMYRF---GIRSNTQVPGTVIGHVTATDRDKGPDGRVVYQLTSQHP 2004

Query: 187  YEKMFSINDSGHISIV--DLSALNTSTIQLVVVATDTGNPPRQASVPAIMHFPEAIVQQA 244
            Y   F +N +    IV   L  ++ +    +VV+  +G   RQ S+  +     A++   
Sbjct: 2005 Y---FKLNRTTGALIVKQKLMHIDMNESPRLVVSASSG---RQGSLSNMTVVEIALMDD- 2057

Query: 245  SSKLNSGTSSTVL----IILGVVLIVLG-------------------FVIILLILYIHKN 281
             ++LN    +T L    I   + ++  G                   F  I L L+I   
Sbjct: 2058 -TELNGARGATALAPTDIGSNMAVVTSGGLADWVLGLLIALLLLILAFGAIFLYLHIRNR 2116

Query: 282  KHTKNNGPPGSSHSKN 297
            +H K +  PG +   N
Sbjct: 2117 RHKKPSTKPGLNGESN 2132



 Score = 46.6 bits (109), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 40/143 (27%), Positives = 62/143 (43%), Gaps = 4/143 (2%)

Query: 88  RFSISRQGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQ- 146
           +F+IS  G ++L   LD E    Y  ++ A    +    T+ + V++ ND  P FR    
Sbjct: 806 KFAISTNGQVTLRDLLDREEVSHYSVSILARSNKLLDVTTLEVIVMDENDNSPEFRPGSC 865

Query: 147 YELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDS-GHISIVDLS 205
           Y L +P      +    VI   +  DG  G+       G     F +N S G +S+++L 
Sbjct: 866 YTLAVPENQETSVI--HVIAATDLDDGKNGEIFYSIESGNIGAKFVLNPSTGVLSMLNLD 923

Query: 206 ALNTSTIQLVVVATDTGNPPRQA 228
             N     L + A D G P R+A
Sbjct: 924 RENVPKYVLTISAKDRGRPSREA 946



 Score = 42.0 bits (97), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 55/222 (24%), Positives = 92/222 (41%), Gaps = 26/222 (11%)

Query: 32   IVSKAGTSLRELQFSKNEYS------VSALENLPVNYVLLTVTTNK-PRDLRVKYWLSND 84
            +   A  S+R +  + N+ +      +S  E   +  VL T+T N       + Y   + 
Sbjct: 1421 LTGTAALSVRVIDINDNQPTFPKHSIISVSEGTAMGTVLTTITANDVDSSPALTYRFDDM 1480

Query: 85   YGERFSISR-QGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFR 143
                FSI R  G + L + LD E    Y   V A+D +   +  + + V ++ND  P+F+
Sbjct: 1481 SSGPFSIDRYGGKVVLRKRLDAEMRSEYTLRVIASDGIHEATTDLTVRVTDLNDNTPQFK 1540

Query: 144  YPQYELFLPHIPLADLTPG---SVIGKVEAADGD---KGDRVTLSLRGPYEKMFSINDSG 197
               Y        +A L+ G     I  V A D D   +  RV   L  P  K FS++   
Sbjct: 1541 QAVY--------VAVLSEGQGKQEILTVNATDDDLSEENSRVRYYLLRPV-KGFSVDPVT 1591

Query: 198  HISIVDLSALNT---STIQLVVVATDTGNPPRQASVPAIMHF 236
             +  V+ +A++      + L +VA D G P   +    ++ F
Sbjct: 1592 GVLTVNHTAISRPIPKEMDLAIVAEDHGKPAASSVCSVVVRF 1633



 Score = 38.9 bits (89), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 50/188 (26%), Positives = 91/188 (48%), Gaps = 18/188 (9%)

Query: 45   FSKNEYSVSALE-NLPVNYVLLTVTTNKPRDL--RVKYWLSNDYGER-FSIS--RQGDIS 98
            F++ +YS + LE N   ++V+    ++  + L  R+ Y + +   +  F+IS    G + 
Sbjct: 1335 FTQIQYSATVLEGNTKGDFVVKLSASDADQGLNSRILYHIVDGNPDNAFTISPPYSGIVR 1394

Query: 99   LMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIP 155
                LD E  + YR T+ ATD     +T +A +++ V+++ND  P F  P++ +    I 
Sbjct: 1395 TNIVLDREIREKYRLTIIATDQGNPQLTGTAALSVRVIDINDNQPTF--PKHSI----IS 1448

Query: 156  LADLTP-GSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSGHISIV--DLSALNTSTI 212
            +++ T  G+V+  + A D D    +T          FSI+  G   ++   L A   S  
Sbjct: 1449 VSEGTAMGTVLTTITANDVDSSPALTYRFDDMSSGPFSIDRYGGKVVLRKRLDAEMRSEY 1508

Query: 213  QLVVVATD 220
             L V+A+D
Sbjct: 1509 TLRVIASD 1516


>gi|3513312|dbj|BAA32597.1| BH-protocadherin-a [Mus musculus]
          Length = 1069

 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 62/203 (30%), Positives = 92/203 (45%), Gaps = 21/203 (10%)

Query: 37  GTSLRELQFSKNEYSVSALENLPVNYV--LLTVTTNKPRDLRVKYWLSNDYGERFSIS-R 93
           G S+ E+ F +N        N+P   V  +L    +  ++  + Y L +     F+I   
Sbjct: 536 GQSVVEVYFPEN--------NIPGERVATVLATDADSGKNAEIAYSLDSSVMGTFAIDPD 587

Query: 94  QGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELF 150
            GDI +   LD E  D Y F V A D    ++  S TV + V + ND DP+F    +  +
Sbjct: 588 SGDILVNTVLDREQTDRYEFKVNAKDKGIPVLQGSTTVIVQVADKNDNDPKFMQDVFTFY 647

Query: 151 LPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSI-NDSGHI-SIVDLSAL 207
           +      +L P S +G V   D DKG    +SL       +FSI ND+G I S +     
Sbjct: 648 VKE----NLQPNSPVGMVTVMDADKGRNAEMSLYIEENSNIFSIENDTGTIYSTMSFDRE 703

Query: 208 NTSTIQLVVVATDTGNPPRQASV 230
           + +T    V A D G+PPR A+ 
Sbjct: 704 HQTTYTFRVKAVDGGDPPRSATA 726



 Score = 45.4 bits (106), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 78/316 (24%), Positives = 133/316 (42%), Gaps = 46/316 (14%)

Query: 30  TLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVT---TNKPRDLRVKYWLSNDYG 86
           T+IV  A  +  + +F ++ ++    ENL  N  +  VT    +K R+  +  ++  +  
Sbjct: 624 TVIVQVADKNDNDPKFMQDVFTFYVKENLQPNSPVGMVTVMDADKGRNAEMSLYIEEN-S 682

Query: 87  ERFSISRQ-GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRF 142
             FSI    G I      D E + +Y F V A D      + +ATV++ V++ ND  P  
Sbjct: 683 NIFSIENDTGTIYSTMSFDREHQTTYTFRVKAVDGGDPPRSATATVSLFVMDENDNAPTV 742

Query: 143 RYPQ---YELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIND- 195
             P+   Y L  P   +      +V+  V A D D G    L+   + G   K+F I+  
Sbjct: 743 TLPRNISYTLLPPSSNVR-----TVVATVLATDSDDGINADLNYSIVGGNPFKLFEIDST 797

Query: 196 SGHISIV-DLSALNTSTIQLVVVATDTGNPPRQA----------SVPAIMHFPEAIVQQA 244
           SG +S+V  L+  +    +LVV   D+G P +            SV         IV+  
Sbjct: 798 SGVVSLVGKLTQKHYGLHRLVVQVNDSGQPSQSTTTLVHVFVNESVSNATVIDSQIVRSL 857

Query: 245 SSKLNSG---------TSSTVLIILGVVLIVLGFVIILLILYIHKNKHTKN-NGPPGSSH 294
            + L            +   + I++GVV  ++  ++I+LI+ + +   +KN NG      
Sbjct: 858 HTPLTQDIAGHPSYEISKQRLSIVIGVVAGIMTVILIILIVMMARYCRSKNKNGYEAGKK 917

Query: 295 SKNDSFLSNVILPEKH 310
              D F      P++H
Sbjct: 918 DHEDFF-----TPQQH 928



 Score = 40.8 bits (94), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 40/150 (26%), Positives = 68/150 (45%), Gaps = 26/150 (17%)

Query: 93  RQGDISLMQCLDYETEDSYRFTVY---ATDTLMTTSATVNISVVNVNDWDPRFRYPQYEL 149
           +Q  + +   LD E  DSY  T+      D   ++ A + + + +VND  PRF    YE 
Sbjct: 256 KQPQLIVKGALDREQRDSYELTLRVRDGGDPPRSSQAILRVLITDVNDNSPRFEKSVYEA 315

Query: 150 FLPHIPLADLTPGSVIGKVEAADGDKG---------DRVTLSLRGPYEKMFSIND-SGHI 199
            L      +  PG+ I ++ A D D G            T S+R    ++  +++ SG +
Sbjct: 316 DLAE----NSAPGTPILQLRATDLDVGVNGQIEYVFGAATESVR----RLLRLDETSGWL 367

Query: 200 SI---VDLSALNTSTIQLVVVATDTGNPPR 226
           S+   +D   +N   ++  V+A D G PP+
Sbjct: 368 SVLHRIDREEVN--QLRFTVMARDRGQPPK 395


>gi|426330697|ref|XP_004026343.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 2, partial
           [Gorilla gorilla gorilla]
          Length = 2911

 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 71/219 (32%), Positives = 102/219 (46%), Gaps = 22/219 (10%)

Query: 25  RYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWL 81
           R ALATL +    T+  +  F + EY  S  ENL V Y +LTV     + P +  + Y L
Sbjct: 257 RSALATLTILVTDTNDHDPVFEQQEYKESLRENLEVGYEVLTVRATDGDAPPNANILYRL 316

Query: 82  SNDYG----ERFSIS-RQGDISLMQCLDYETEDSYRFTVYATDT-----LMTTSATVNIS 131
               G    E F I  R G I     +D E  +SY+ TV A+D        +T+A V +S
Sbjct: 317 LEGSGGSPSEVFEIDPRSGVIRTRGPVDREEVESYQLTVEASDQGRDPGPRSTTAAVFLS 376

Query: 132 VVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYE 188
           V + ND  P+F   +Y + +      D+TPGS + +V A+D DKG    +    + G   
Sbjct: 377 VEDDNDNAPQFSEKRYVVQV----REDVTPGSPVLRVTASDRDKGSNALVHYSIMSGNAR 432

Query: 189 KMFSIN-DSGHISIVD-LSALNTSTIQLVVVATDTGNPP 225
             F ++  +G + +V  L    T    L V A D G PP
Sbjct: 433 GQFYLDAQTGALDVVSPLDYETTKEYTLRVRAQDGGRPP 471



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 50/171 (29%), Positives = 80/171 (46%), Gaps = 15/171 (8%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGERFSIS---RQGDIS 98
           F    +  + LE++P+ Y++L V     +   + R++Y L+   G  F  +     G IS
Sbjct: 493 FVSTPFQATVLESVPLGYLVLHVQAIDADAGDNARLEYRLAG-VGHDFPFTINNGTGWIS 551

Query: 99  LMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIP 155
           +   LD E  D Y F V A D     +T SA+V+++V++VND +P F  P+Y + L    
Sbjct: 552 VAAELDREEVDFYSFGVEARDHGTPALTASASVSVTVLDVNDNNPTFTQPEYTVRLNE-- 609

Query: 156 LADLTPGSVIGKVEAADGDKGDRVTLSL-RGPYEKMFSINDSGHISIVDLS 205
             D   G+ +  V A D D    +T  +  G     FSI       +V L+
Sbjct: 610 --DAAVGTSVVTVSAVDRDAHSVITYQITSGNTRNRFSITSQSGGGLVSLA 658



 Score = 44.7 bits (104), Expect = 0.081,   Method: Compositional matrix adjust.
 Identities = 50/189 (26%), Positives = 86/189 (45%), Gaps = 14/189 (7%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRDLR--VKYWL-SNDYGERFSISRQ---GDIS 98
           F++ EY+V   E+  V   ++TV+    RD    + Y + S +   RFSI+ Q   G +S
Sbjct: 598 FTQPEYTVRLNEDAAVGTSVVTVSAVD-RDAHSVITYQITSGNTRNRFSITSQSGGGLVS 656

Query: 99  LMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLAD 158
           L   LDY+ E  Y   V A+D     +A + ++V + N   P F+   Y + +      D
Sbjct: 657 LALPLDYKLERQYVLAVTASDGTRQDTAQIVVNVTDANTHRPVFQSSHYTVNVNE----D 712

Query: 159 LTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSINDSGHISI-VDLSALNTSTIQLV 215
              G+ +  + A D D G+  R+T  +     +     D+G ++   +L   +  +  L 
Sbjct: 713 RPAGTTVVLISATDEDTGENARITYFMEDSIPQFRIDADTGAVTTQAELDYEDQVSYTLA 772

Query: 216 VVATDTGNP 224
           + A D G P
Sbjct: 773 ITARDNGIP 781



 Score = 44.7 bits (104), Expect = 0.084,   Method: Compositional matrix adjust.
 Identities = 40/149 (26%), Positives = 69/149 (46%), Gaps = 10/149 (6%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWL-SNDYGERFSIS-RQGDISL 99
            F ++E+ V   EN P+   +  VT   P +    ++ Y +   +  E F +    G+++ 
Sbjct: 909  FEQDEFDVFVEENSPIGLAVARVTATDPDEGTNAQIMYQIVEGNIPEVFQLDIFSGELTA 968

Query: 100  MQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPH--IPLA 157
            +  LDYE    Y   + AT   + + ATV++ +++ ND  P      +E+   +     +
Sbjct: 969  LVDLDYEDRPEYVLVIQATSAPLVSRATVHVRLLDRNDNPPVLG--NFEILFNNYVTNRS 1026

Query: 158  DLTPGSVIGKVEAADGDKGDRVTLSL-RG 185
               PG  IG+V A D D  D +T S  RG
Sbjct: 1027 SSFPGGAIGRVPAHDPDISDSLTYSFERG 1055


>gi|338713192|ref|XP_001504036.2| PREDICTED: LOW QUALITY PROTEIN: protocadherin gamma-C4 [Equus
           caballus]
          Length = 871

 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 64/230 (27%), Positives = 102/230 (44%), Gaps = 22/230 (9%)

Query: 13  LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKP 72
           LV+ A+   N  R   A L VS    +     F ++ Y +S LE+ P   +L+ +  + P
Sbjct: 210 LVLTAVDGGNPPRSGTAELRVSVLDVNDNAPAFQQSSYRISVLESAPAGMLLIQLNASDP 269

Query: 73  RDL----RVKYWLSNDYGER----FSI-SRQGDISLMQCLDYETEDSYRFTVYATD---T 120
            DL     V +  S    +R    FS+    G ++L   LD+E+E+ Y F V A D    
Sbjct: 270 -DLGPSGNVTFSFSGHTPDRVRNLFSLHPTTGKLTLQGPLDFESENYYEFDVRARDGGSP 328

Query: 121 LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVT 180
            M    ++ + +++VND  P          LP        PG+V+  +   D D G    
Sbjct: 329 AMEQHCSLRVDLLDVNDNAPHITVTSELGTLPE----SAEPGTVVALISVQDPDSGSNGD 384

Query: 181 LSLRGPYEKMFSINDS--GHISIVDLSALN---TSTIQLVVVATDTGNPP 225
           +SLR P    F++  +     S+V    L+    S+  ++V A+D GNPP
Sbjct: 385 VSLRIPDHLPFALKSAFRNQFSLVTAGPLDREARSSYDIMVTASDAGNPP 434



 Score = 47.8 bits (112), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 45/169 (26%), Positives = 77/169 (45%), Gaps = 27/169 (15%)

Query: 77  VKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVV 133
           + + L + +  +FS+   G       LD E   SY   V A+D     ++T  T+ +++ 
Sbjct: 393 LPFALKSAFRNQFSLVTAGP------LDREARSSYDIMVTASDAGNPPLSTQRTIFLNIS 446

Query: 134 NVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMF 191
           +VND  P F    +E+F+P     +  PG ++  + A+D D G    ++ SL  P  +  
Sbjct: 447 DVNDNPPSFFQRSHEVFVPE----NNRPGDLLCSLAASDPDSGLNALISYSLLEPRNR-- 500

Query: 192 SINDSGHISIVDLSAL----------NTSTIQLVVVATDTGNPPRQASV 230
            ++ S  IS+   +             T T+Q  V A D GNPP  ++V
Sbjct: 501 DVSASSFISLNPQTGAVHATRSFDYEQTQTLQFEVQARDRGNPPLSSTV 549



 Score = 43.9 bits (102), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 49/190 (25%), Positives = 83/190 (43%), Gaps = 15/190 (7%)

Query: 95  GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYE--L 149
           G +   +  DYE   + +F V A D     ++++ TV + V+++ND  P    P+     
Sbjct: 515 GAVHATRSFDYEQTQTLQFEVQARDRGNPPLSSTVTVRLFVLDLNDNAPAVLRPRARPGS 574

Query: 150 FLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIND-SGHISIVDLS 205
             P      +  G ++ KV A D D G    +S   L  P   +F+++  +G +      
Sbjct: 575 LCPQALPPSVGAGHLVTKVTAVDLDSGYNAWVSYQLLEAPDPSLFAVSRYAGEVRTAVPI 634

Query: 206 ALNTSTIQLVVVATDTGNPPRQASVPAIMHFPE---AIVQ--QASSKLNSGTSSTVLIIL 260
             +    +LV+V  D+G+PP   SV  ++   E    +V   + SS    G S   L  L
Sbjct: 635 PADLPPQKLVIVVKDSGSPPLSTSVTLLVSLEEDTHPVVPDLRESSAPREGESRLTL-YL 693

Query: 261 GVVLIVLGFV 270
            V L+ + FV
Sbjct: 694 AVSLVAICFV 703


>gi|301623209|ref|XP_002940912.1| PREDICTED: protocadherin Fat 1-like isoform 2 [Xenopus (Silurana)
            tropicalis]
          Length = 4570

 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 56/217 (25%), Positives = 101/217 (46%), Gaps = 20/217 (9%)

Query: 33   VSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWL---SNDYGERF 89
            ++K   S   + F +  +S S +E+ PV +++  +TT     L    W      +Y  RF
Sbjct: 1315 IAKPAPSAEPITFEEPSFSFSVMESDPVAHMIGVITTEP---LGSPLWFDITGGNYDSRF 1371

Query: 90   SISR-QGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYE 148
             + +  G I + + LD E + +Y  TV ATD   + S  V+I V++ ND  P F   +YE
Sbjct: 1372 DVDKGTGTIIVARPLDAEQKSNYNLTVEATDGTRSVSTQVSIKVIDTNDHRPEFSTSKYE 1431

Query: 149  LFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYE----KMFSINDSGHISIVDL 204
            + +P     D+ P + I +V A D D+ +++  +L+   +    K F + D    S+   
Sbjct: 1432 VLIPE----DVQPDTEILQVIAIDRDEKNKLIYTLQSSTDPVSLKKFRM-DPATGSLYTT 1486

Query: 205  SALNTSTIQLVVVATDTGNPPRQASVPAIMHFPEAIV 241
              L+  T+Q  ++        R   VP + +F   ++
Sbjct: 1487 EKLDHETMQQHILTVMV----RDQDVPVLRNFARIVI 1519



 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 63/233 (27%), Positives = 106/233 (45%), Gaps = 20/233 (8%)

Query: 29   ATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYV---LLTVTTNKPRDLRVKYWLSNDY 85
            A + V+    +L   +F +NEY V   EN PV  +   L  V  +K    ++ Y + ND+
Sbjct: 2445 AQVHVTVKSANLHSPKFGQNEYEVELSENSPVQTLVTELKAVDEDKGLYGQLTYHIINDF 2504

Query: 86   G-ERFSISRQGDISLMQCLDYE--TEDSYRFTVYATDTLMTTS-ATVNISVVNVNDWDPR 141
              + F+I+ +G +   +  D E  T      +V A DT        VN+ + + ND  P+
Sbjct: 2505 AKDNFNINERGQLFTAERFDREIPTNKVIPVSVMAKDTGGKVGFCIVNVILTDSNDNVPQ 2564

Query: 142  FRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTL-----SLRGPYEKMFSINDS 196
            FR  +Y++ +     +D+  G+ I KV A+D D+G    +     +     E+ F I+ S
Sbjct: 2565 FRATEYKVSI----ASDVPRGTPIVKVIASDSDEGANADIFYSIEAQSASVEENFGISQS 2620

Query: 197  GH--ISIVDLSALNTSTIQLVVVATDTGNPPRQASVPAIMHF--PEAIVQQAS 245
                I+   L  L        V ATD G P +++ VP  +    PE ++ + S
Sbjct: 2621 SGTIITKESLIGLEDEVYSFFVKATDGGTPQKESLVPVFIRILPPEVVLPKFS 2673



 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 63/216 (29%), Positives = 96/216 (44%), Gaps = 31/216 (14%)

Query: 50   YSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSN-DYGERFSIS-RQGDISLMQCLDYET 107
            YS    EN  ++  ++ V  N P   R+ Y +++ D   +F+I+   G I++   LD+E+
Sbjct: 2156 YSAEIAENANLHSPVVHVQANSPEGYRIIYSITDGDPFNQFNINFNTGVINVFAPLDFES 2215

Query: 108  EDSYRFTVYATDTLMTTSATVNISVV--NVNDWDPRFRYPQYELFLPHIPLADLTPGSVI 165
              +Y+  V ATD+L    A V + ++  +VND  P FR   Y         A L+  SVI
Sbjct: 2216 HPAYKLRVRATDSLTGAHAEVFVDIILEDVNDNPPVFREKTY--------AATLSEASVI 2267

Query: 166  G----KVEAADGDKGDRVTLSLR-----GPYEKMFSINDSGHISIVDLSALNTSTIQ--- 213
            G    ++ A D D G    +S       G   + F I+ S  + I     L+    Q   
Sbjct: 2268 GTSVVQINAKDPDSGQNNAISFHLVETSGNISQYFHIDASSGL-IETAKPLDYEYFQECT 2326

Query: 214  LVVVATDTGNPPRQASVPAIMHF------PEAIVQQ 243
            LVV ATD G PP    +   +        P A +QQ
Sbjct: 2327 LVVRATDNGIPPLSNDISVHIGLTDLNDNPPAFIQQ 2362



 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 76/261 (29%), Positives = 111/261 (42%), Gaps = 30/261 (11%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRV------KYWLSNDYGERFSISR-QGDI 97
            F   EY  S  E+ PV   +L V     RD+ V      K    N++G +F+I+   G I
Sbjct: 3199 FEHREYGSSLTEDAPVGTEVLQVYATS-RDIEVNAEITYKIISGNEHG-KFTINPVTGMI 3256

Query: 98   SLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHI 154
             ++  LDYET   Y  TV ATD     ++  A+VNI+V +VND  P F    Y   +   
Sbjct: 3257 FIIASLDYETSPEYYLTVEATDGGTPPLSDVASVNINVTDVNDNSPVFSQNTYTTVVGE- 3315

Query: 155  PLADLTPGSVIGKVEA--ADGDKGDRVTLSL-RGPYEKMFSIND-SGHISIVDLSALN-T 209
               D   G  +  V A  ADG   + +  S+  G     F I+   G + +  L      
Sbjct: 3316 ---DSVSGQSVLMVVADDADGPLNNHIRYSITEGNPGNTFIIDPVRGEVKVNKLLDRELI 3372

Query: 210  STIQLVVVATDTGNPPRQASVPAIMHFPEAIVQQASSKLNSGTSSTVLIILGVVLIVLGF 269
            S   L + A D G PPR+ +    +   +  V       + G  S V+     V    GF
Sbjct: 3373 SGYTLTIQAEDNGQPPRRNTTTVNIDVSD--VNDNPPMFSKGNYSIVIQENKPV----GF 3426

Query: 270  VIILLILYIHKNKHTKNNGPP 290
             I+ L +    +K + +NGPP
Sbjct: 3427 SILHLAV---TDKDSSHNGPP 3444



 Score = 42.7 bits (99), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 66/233 (28%), Positives = 107/233 (45%), Gaps = 19/233 (8%)

Query: 6    DFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLL 65
            + L+   L+V+A   D   R+  A + ++    +    +FS + Y+V+  EN      LL
Sbjct: 3057 EILEVYHLMVKAT--DGGGRFCQAAVELTLEDVNDNAPEFSADPYTVTVYENTEPQTPLL 3114

Query: 66   TVTT---NKPRDLRVKYWLSNDYGERFSISR-QGDISLMQCLDYETEDSYRFTVYATDT- 120
             V     +   + +V+Y L +    +FSI    G ISL + LD E +  Y  TV ATD  
Sbjct: 3115 RVQAIDADLGLNHKVQYSLVSSAEGQFSIDELSGIISLEKPLDRELQAVYTLTVKATDQG 3174

Query: 121  ---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGD 177
                +++ A+V +SV+++ND  P F + +Y   L      D   G+ + +V A   D   
Sbjct: 3175 LPRKLSSVASVVVSVLDINDNPPVFEHREYGSSL----TEDAPVGTEVLQVYATSRDIEV 3230

Query: 178  RVTLSLR---GPYEKMFSIND-SGHISIV-DLSALNTSTIQLVVVATDTGNPP 225
               ++ +   G     F+IN  +G I I+  L    +    L V ATD G PP
Sbjct: 3231 NAEITYKIISGNEHGKFTINPVTGMIFIIASLDYETSPEYYLTVEATDGGTPP 3283



 Score = 42.7 bits (99), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 42/163 (25%), Positives = 72/163 (44%), Gaps = 16/163 (9%)

Query: 45   FSKNEYSVSALENLPVNYVLLTV-------TTNKPRDLRVKYWLSNDYGERFSISRQGDI 97
            FSK  YS+   EN PV + +L +       + N P    V  +LS +    F +  QG I
Sbjct: 3409 FSKGNYSIVIQENKPVGFSILHLAVTDKDSSHNGPPFTFV--FLSGNEDNTFQMDEQGLI 3466

Query: 98   SLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHI 154
            +    L  + +D +   +  +D     +++   + + V+  +   P       E+++   
Sbjct: 3467 TTAGTLSRKIKDLFVLHIQVSDNGKPQLSSFTNIEVRVIEESIHPPAIL--PLEIYI--T 3522

Query: 155  PLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSG 197
               +   G VIGKV A D D  D +T SL    E +FS++ +G
Sbjct: 3523 TFGEEYSGGVIGKVHATDQDVYDTLTYSLDPKMENLFSVSKTG 3565



 Score = 41.6 bits (96), Expect = 0.68,   Method: Compositional matrix adjust.
 Identities = 40/145 (27%), Positives = 64/145 (44%), Gaps = 8/145 (5%)

Query: 90   SISRQGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYEL 149
            ++  +  + + + LD E +D+Y   + ATD    T A V + V++ ND  P      Y  
Sbjct: 2940 NMQHEWKVYVRKPLDREVKDNYLLNITATDGTFATKAVVEVKVLDANDNTPVCEKTSYAE 2999

Query: 150  FLPHIPLADLTPGSVIGKVEAADGD--KGDRVTLSLRGPYEKMFSIND-SGHISI-VDLS 205
             +    LA    G VI +V A+D D      +  +L G   + F +N  +G +   + L 
Sbjct: 3000 TISEDALA----GRVILQVAASDADIRSNAEIIYTLHGVGAEKFHLNPFTGELKTSLPLD 3055

Query: 206  ALNTSTIQLVVVATDTGNPPRQASV 230
                    L+V ATD G    QA+V
Sbjct: 3056 REILEVYHLMVKATDGGGRFCQAAV 3080



 Score = 41.2 bits (95), Expect = 0.80,   Method: Compositional matrix adjust.
 Identities = 58/204 (28%), Positives = 90/204 (44%), Gaps = 28/204 (13%)

Query: 43   LQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVK-----YWLSNDYGERFSIS-RQGD 96
            L+F++  YS + LEN      + T+T   P   R+      + L+ D   RF IS   G 
Sbjct: 1946 LKFTQRSYSATVLENATK---VKTLTIISPLGSRINEPLFFHILNPD--PRFKISPTSGV 2000

Query: 97   ISLMQC-LDYETEDSYRFTVYATDTLMTTSAT---VNISVVNVNDWDPRFRYPQYELFLP 152
            +S      D E ED +   V  +D     +     V ++V +VND +P F      + LP
Sbjct: 2001 LSTTGIPFDREEEDLFELVVEVSDEQKPPTVAHVLVQVTVEDVNDNNPVF------VNLP 2054

Query: 153  HIPLA--DLTPGSVIGKVEAADGD--KGDRVTLSLRGPYEKMFSINDSGHISIVDLSALN 208
            +  +   D   G +I  V A D D  K   +T  L+  + + F I  SG I +      +
Sbjct: 2055 YYAMVQIDAPEGHLIRHVTAVDRDIGKNGEITYYLK-EHSQQFQIGPSGEIKLKKQFDPD 2113

Query: 209  TSTIQ--LVVVATDTGNPPRQASV 230
            +S  +  + VVA D+GNP   + V
Sbjct: 2114 SSNKEYFITVVAKDSGNPSYSSEV 2137



 Score = 40.8 bits (94), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 53/190 (27%), Positives = 88/190 (46%), Gaps = 18/190 (9%)

Query: 53   SALENLPVNYVLLTVTTNKP---RDLRVKYWLSNDYG-ERFSISRQ-GDISLMQCLDYET 107
            S  E++P+   ++TV+ +     RD  ++Y + +  G   F+I  + G I     LD ET
Sbjct: 1011 SIREDVPIGTPVMTVSAHDEDTGRDGEIRYSIRDGSGVGVFTIHEEKGTIRTADNLDRET 1070

Query: 108  EDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSV 164
               Y  TVYATD     +++   + I + +VND  P+   P   ++ P +        SV
Sbjct: 1071 TSHYWLTVYATDRGVVPLSSFIQIYIEIEDVNDNAPQTVEP---VYYPEVMENSAKDVSV 1127

Query: 165  IGKVEAADGD--KGDRVTLSLR-GPYEKMFSIN-DSGHISIVD--LSALNTSTIQLVVVA 218
            + ++ A D D    D++T  +  G  +  F+IN  +G I+     L     S   L V  
Sbjct: 1128 V-QINAFDPDSISSDKLTYKISTGNPQGFFAINPKTGLITTTSRKLDREQQSEHILEVTI 1186

Query: 219  TDTGNPPRQA 228
            TD G+P + A
Sbjct: 1187 TDNGHPAKSA 1196



 Score = 40.8 bits (94), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 55/215 (25%), Positives = 96/215 (44%), Gaps = 19/215 (8%)

Query: 24  DRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYW 80
           D+ A   +++   GT++   +F++  Y     EN P+   + +V     ++  +  + Y 
Sbjct: 411 DKKAFTKVLIKVLGTNINTPEFTQTSYKAVVDENSPIGSSVFSVHAVDHDEGENGFITYS 470

Query: 81  LSNDYGERFSI-SRQGDISLMQCLDYETEDS-YRFTVYATDTLM----TTSATVNISVVN 134
           ++N   + F+I +  G I+ ++ LDYE     Y   + A+D  +     T   V I++ N
Sbjct: 471 IANINPQPFAIDAFSGVITTLEDLDYELMPRIYTLKIRASDWGLPYRRETEIPVTITLNN 530

Query: 135 VNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYE-KMFSI 193
           +ND  P F     E  +P     DL  G  I  V A D D+   V   +    E  +F++
Sbjct: 531 LNDNIPLFEKVNCEGTVP----KDLGVGEQITTVSAIDADELQLVKYRIESGDELDLFTL 586

Query: 194 N-DSGHIS----IVDLSALNTSTIQLVVVATDTGN 223
           N +SG +S    + +  A   S   L + ATD  N
Sbjct: 587 NPNSGVLSLKQPLSEGPANKVSFYSLRITATDGEN 621


>gi|51345976|gb|AAU01513.1| protocadherin 7b [Rattus norvegicus]
          Length = 1094

 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 62/203 (30%), Positives = 92/203 (45%), Gaps = 21/203 (10%)

Query: 37  GTSLRELQFSKNEYSVSALENLPVNYV--LLTVTTNKPRDLRVKYWLSNDYGERFSIS-R 93
           G S+ E+ F +N        N+P   V  +L    +  ++  + Y L +     F+I   
Sbjct: 536 GQSVVEVYFPEN--------NIPGERVATVLATDADSGKNAEIAYSLDSSVMGTFAIDPD 587

Query: 94  QGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELF 150
            GDI +   LD E  D Y F V A D    ++  S TV + V + ND DP+F    +  +
Sbjct: 588 SGDILVNTVLDREQTDRYEFKVNAKDKGIPVLQGSTTVIVQVADKNDNDPKFMQDVFTFY 647

Query: 151 LPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSI-NDSGHI-SIVDLSAL 207
           +      +L P S +G V   D DKG    +SL       +FSI ND+G I S +     
Sbjct: 648 VKE----NLQPNSPVGMVTVMDADKGRNAEMSLYIEENSNIFSIENDTGTIYSTMSFDRE 703

Query: 208 NTSTIQLVVVATDTGNPPRQASV 230
           + +T    V A D G+PPR A+ 
Sbjct: 704 HQTTYTFRVKAVDGGDPPRSATA 726



 Score = 41.2 bits (95), Expect = 0.96,   Method: Compositional matrix adjust.
 Identities = 38/156 (24%), Positives = 70/156 (44%), Gaps = 18/156 (11%)

Query: 93  RQGDISLMQCLDYETEDSYRFTVY---ATDTLMTTSATVNISVVNVNDWDPRFRYPQYEL 149
           +Q  + +   LD E  DSY  T+      D   ++ A + + + +VND  PRF    YE 
Sbjct: 256 KQPQLIVKGALDREQRDSYELTLRVRDGGDPPRSSQAILRVLITDVNDNSPRFEKSVYEA 315

Query: 150 FLPHIPLADLTPGSVIGKVEAADGDKG-----DRVTLSLRGPYEKMFSIND-SGHISI-- 201
            L      +  PG+ I ++ A D D G     + V  +      ++  +++ SG +S+  
Sbjct: 316 DLAE----NSAPGTPILQLRATDLDVGVNGQIEYVFGAATESVRRLLRLDETSGWLSVLH 371

Query: 202 -VDLSALNTSTIQLVVVATDTGNPPRQASVPAIMHF 236
            +D   +N   ++  V+A D G PP+      +++ 
Sbjct: 372 RIDREEVN--QLRFTVMARDRGQPPKTDKATVVLNI 405


>gi|431899688|gb|ELK07642.1| Protocadherin Fat 4 [Pteropus alecto]
          Length = 2137

 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 73/263 (27%), Positives = 114/263 (43%), Gaps = 40/263 (15%)

Query: 2   INEDD-----FLQPITLV---VRAIQYDNQDRYALATLIVSKAGTSLRELQ--------- 44
           +NEDD     FL P+T V    R + Y++Q  Y L T+     G     ++         
Sbjct: 225 VNEDDEDGIFFLNPVTGVFNLTRVLDYESQQYYIL-TVRAEDGGGQFTTIRVYFNILDVN 283

Query: 45  -----FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWL-SNDYGERFSISRQG 95
                FS N YS S +ENLP+   +L        D    ++ Y + S D   +F++ + G
Sbjct: 284 DNPPVFSLNSYSTSLMENLPLGSTVLVFNVTDADDGINSQLAYSIASGDSLGQFAVDKNG 343

Query: 96  DISLMQCLDYETEDSYRFTVYATD----TLMTTSATVNISVVNVNDWDPRFRYPQYELFL 151
            +++++ LD E++  Y   V   D        ++A V+I +++VND  P F  P+     
Sbjct: 344 VLTVLKSLDRESQSFYSLVVQVHDLPPPPAKNSTAQVSIILLDVNDNPPTFLSPRLTYIP 403

Query: 152 PHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIN--DSGHISIVDLSAL 207
            + PL      +V+ K +A D D G    V  +L  P    FSI   D+      +L   
Sbjct: 404 ENTPL-----DTVVFKAQATDPDSGPNSYVEYALLSPSGSKFSIGTIDAEVRLTGELDRE 458

Query: 208 NTSTIQLVVVATDTGNPPRQASV 230
             S   L V+ATD G P   +S 
Sbjct: 459 AVSNYTLTVLATDKGQPALSSSA 481



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 62/192 (32%), Positives = 93/192 (48%), Gaps = 24/192 (12%)

Query: 50   YSVSALENLPVNYVLLTVTTNKPRDLRV----KYWLSNDYGERFSIS-RQGDISLMQCLD 104
            +S    EN P+ Y +  VTT+   D+ V    +Y +  D    F+I+   GDI + + L+
Sbjct: 1122 FSAHVPENSPLGYTVTRVTTSD-EDVGVNAVSRYSII-DRSLPFTINPSTGDIVISRPLN 1179

Query: 105  YETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSV 164
             E  D YR  V A D+  T S  V I V +VND  PRF  P Y L  P   L+++  GS 
Sbjct: 1180 REDTDRYRIRVSAHDSGWTVSTDVTIFVTDVNDNAPRFSRPSYYLDCPE--LSEI--GSK 1235

Query: 165  IGKVEAADGDKGD--RVTLSLRGPYEKMFSIN-DSGHI---------SIVDLSALNTSTI 212
            + +V A D D+G   +V   ++   E  F IN  +G I         ++   S +N +  
Sbjct: 1236 VTQVSATDPDEGSNGQVFYFIKSQSE-YFRINATTGEIFSKQVLKYQNVSGFSNVNINRH 1294

Query: 213  QLVVVATDTGNP 224
              +V ++D GNP
Sbjct: 1295 SFIVTSSDRGNP 1306



 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 34/101 (33%), Positives = 49/101 (48%), Gaps = 5/101 (4%)

Query: 77  VKYWLSNDYGERFSIS-RQGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNV 135
           V Y + +   + F I    GD+   + LD E    Y   V A D L ++   +NI+V +V
Sbjct: 120 VTYTIISGADDSFRIDPESGDLIATRRLDRERRSKYSLLVRADDGLQSSDMRINITVSDV 179

Query: 136 NDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG 176
           ND  P+F  P Y   +P     D TPGS++  + A D D G
Sbjct: 180 NDHSPKFSRPVYSFDIPE----DTTPGSLVAAILATDDDSG 216



 Score = 52.4 bits (124), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 63/228 (27%), Positives = 98/228 (42%), Gaps = 43/228 (18%)

Query: 45  FSKNEYSVSALENLPV--NYVLLTVTTNKPRDLRVKY---WLSNDYGERFSISRQGDISL 99
           F  + YS++  ENL      VL  V  +  + L  K     +  +    F++S  G++ +
Sbjct: 602 FELSPYSINVPENLGALPRTVLQVVARDDDQGLNSKLSYVLVGGNEDNAFTLSAGGELRV 661

Query: 100 MQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
            + LD ET++ +  T+ ATD+    +T + TV++ V + ND  P F    Y   +P    
Sbjct: 662 TRSLDRETKERFVLTITATDSGSPALTGTGTVHVVVDDANDNIPTFASKMYFTAVPE--- 718

Query: 157 ADLTPGSVIGKVEAADGDKGDRVTLSLR---GPYEKMFSINDS-GHI---SIVDLSALNT 209
            D   G+ +  V A+D D      +S R   G     F+IN S G I   +++D    + 
Sbjct: 719 -DAPTGTDVLLVNASDADASTNAVISYRIIGG--NSQFTINPSTGQIITSALLDRETKDN 775

Query: 210 STIQLVVVATDTG--------------------NPPRQASVPAIMHFP 237
            T  LVVVA+D G                    NPPR    P + H P
Sbjct: 776 YT--LVVVASDAGSPEPLSSSTSVLVTVTDVNDNPPRFQHHPYVTHIP 821



 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 48/149 (32%), Positives = 70/149 (46%), Gaps = 12/149 (8%)

Query: 95  GDISLMQCLDYETEDSYRFTVYATDT----LMTTSATVNISVVNVNDWDPRFRYPQYELF 150
           G I     LD ET+D+Y   V A+D      +++S +V ++V +VND  PRF   Q+  +
Sbjct: 760 GQIITSALLDRETKDNYTLVVVASDAGSPEPLSSSTSVLVTVTDVNDNPPRF---QHHPY 816

Query: 151 LPHIPLADLTPGSVIGKVEAADGDKGDRVTL--SLRGPYEKMFSINDSGHISIVDLSALN 208
           + HIP +  +PGS +  V   D D G    L  SL G   + F I D    +I+    LN
Sbjct: 817 VTHIP-STTSPGSFVFAVTVTDADIGPNSELHYSLSGRNSEKFHI-DPLRGAIMAAGPLN 874

Query: 209 -TSTIQLVVVATDTGNPPRQASVPAIMHF 236
             S +   V   D G  P+  S    + F
Sbjct: 875 GASEVTFSVHVKDGGPSPKTDSTTVTVRF 903



 Score = 51.2 bits (121), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 54/183 (29%), Positives = 87/183 (47%), Gaps = 16/183 (8%)

Query: 56  ENLPVNYVLLTVTTNKPR---DLRVKYWLSNDYGERFSISR-QGDISLMQCLDYETEDSY 111
           EN P++ V+       P    +  V+Y L +  G +FSI     ++ L   LD E   +Y
Sbjct: 404 ENTPLDTVVFKAQATDPDSGPNSYVEYALLSPSGSKFSIGTIDAEVRLTGELDREAVSNY 463

Query: 112 RFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKV 168
             TV ATD     +++SA V + V+++ND  P F    Y + +      D   G+ + +V
Sbjct: 464 TLTVLATDKGQPALSSSAEVVVVVLDINDNSPAFAQALYRVEMSE----DTLTGTDVVQV 519

Query: 169 EAADGDKGDRVTLS---LRGPYEKMFSIND-SGHISIVD-LSALNTSTIQLVVVATDTGN 223
            AAD D+G    +    + G  ++ F I+  +G +++   L    TST  L V A D G+
Sbjct: 520 CAADADEGTNGQVRYGIVDGNADQDFRIDSVTGAVTVARPLDREKTSTYLLTVQAADRGS 579

Query: 224 PPR 226
            PR
Sbjct: 580 TPR 582



 Score = 46.6 bits (109), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 40/140 (28%), Positives = 68/140 (48%), Gaps = 13/140 (9%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGERFSIS-RQGDISLM 100
            F  +EY  + LEN P    ++ +     +   +  + Y + +   + F I    G I+  
Sbjct: 1539 FLPDEYLPTVLENAPSGTTVIHLNATDADSGTNAVIAYAVQSSDSDLFVIDPNTGVITTQ 1598

Query: 101  QCLDYETEDSYRFTVYA---TDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLA 157
              LD+ET+ SY  TV A    D    + ATVNI +   N++ PRF   +Y     +  ++
Sbjct: 1599 GFLDFETKQSYHLTVKAFNVPDEERCSFATVNIQLKGTNEYVPRFVSKRY-----YFEIS 1653

Query: 158  DLTP-GSVIGKVEAADGDKG 176
            +  P G+++G+V A+D D G
Sbjct: 1654 EAAPRGTLVGEVFASDRDLG 1673



 Score = 43.9 bits (102), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 46/158 (29%), Positives = 80/158 (50%), Gaps = 12/158 (7%)

Query: 76  RVKYWLSNDYGER-FSI-SRQGDISLMQCLDYETEDSYRFTVYATD---TLMTTSATVNI 130
           +V+Y + +   ++ F I S  G +++ + LD E   +Y  TV A D   T  T ++TV+I
Sbjct: 531 QVRYGIVDGNADQDFRIDSVTGAVTVARPLDREKTSTYLLTVQAADRGSTPRTDTSTVSI 590

Query: 131 SVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPY 187
            +++ ND+ P F    Y + +P   L  L P +V+ +V A D D+G    LS   + G  
Sbjct: 591 VLLDSNDFVPTFELSPYSINVPE-NLGAL-PRTVL-QVVARDDDQGLNSKLSYVLVGGNE 647

Query: 188 EKMFSINDSGHISIV-DLSALNTSTIQLVVVATDTGNP 224
           +  F+++  G + +   L         L + ATD+G+P
Sbjct: 648 DNAFTLSAGGELRVTRSLDRETKERFVLTITATDSGSP 685



 Score = 43.5 bits (101), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 41/142 (28%), Positives = 72/142 (50%), Gaps = 14/142 (9%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLR----VKYWLSN-DYGERFSI-SRQGDI 97
            +FS+   + +  E+  +  ++ TV+  + RD      ++Y +S+ + G  F+I S  G +
Sbjct: 1433 EFSQTHVTAALPESHSIGAMVRTVSA-RDRDAAMNGVIRYSISSGNEGGVFAINSSTGVL 1491

Query: 98   SLMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHI 154
            +L + LDYE    +  TV ATD      T   +V ++V++VND  P F   +Y   LP +
Sbjct: 1492 TLAKALDYELCQKHEMTVSATDGGWVARTGYCSVTVNVIDVNDNSPVFLPDEY---LPTV 1548

Query: 155  PLADLTPGSVIGKVEAADGDKG 176
             L +   G+ +  + A D D G
Sbjct: 1549 -LENAPSGTTVIHLNATDADSG 1569



 Score = 40.0 bits (92), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 41/148 (27%), Positives = 68/148 (45%), Gaps = 14/148 (9%)

Query: 89   FSISRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYP 145
            FS+S  G +S  + +D E    +  +V   D+    M+++ TV ++V++ ND   + R  
Sbjct: 1903 FSLSAAGVLSTTREIDREQIAHFYLSVVTRDSGVPQMSSTGTVRVTVIDQNDNPSQPR-- 1960

Query: 146  QYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSGHISIVDLS 205
              E+F+ +     + PG  +G V+  D D  D    SL      +FSI         DLS
Sbjct: 1961 AVEIFVNY--FGTVFPGGTLGSVKPQDPDVADTFRCSLTAGVAGLFSI----PRGTCDLS 2014

Query: 206  A---LNTSTIQLVVVATDTGNPPRQASV 230
            A       T +L V++ D  + P  +SV
Sbjct: 2015 AQPRAADGTFELAVLSDDGLHGPVTSSV 2042


>gi|194219801|ref|XP_001917807.1| PREDICTED: protocadherin gamma-A7 [Equus caballus]
          Length = 837

 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 85/299 (28%), Positives = 134/299 (44%), Gaps = 48/299 (16%)

Query: 31  LIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKP---RDLRVKYWLSNDYGE 87
           ++V+ A T+     F  + YSV   EN P    + +VT + P    +  V Y LS D  +
Sbjct: 438 ILVNVADTNDNPPAFPHSSYSVFIPENNPRGASIFSVTAHDPDSDENAHVTYSLSEDTLQ 497

Query: 88  RFSISR-------QGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVND 137
             SIS         G +  +   DYE     R  V A D+    ++++ +++I V++ ND
Sbjct: 498 DVSISSYVSINSDTGVLYALHSFDYEQFRDLRLRVTAHDSGDPPLSSNMSLSIFVLDQND 557

Query: 138 WDPRFRYPQYELFLP-----HIPLADLT--PGSVIGKVEAADGDKGDRVTLS---LRGPY 187
             P   YP     LP      + LA  +  PG ++ KV A D D G    LS   L+   
Sbjct: 558 NPPEILYPS----LPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKASE 613

Query: 188 EKMFSIN-DSGHI----SIVDLSALNTSTIQLVVVATDTGNPPRQA----------SVPA 232
             +F++   +G +    +++D  AL  S   LVVV  D G PP  A          S+P 
Sbjct: 614 PGLFTVGLHTGEVRTARALLDRDALKQS---LVVVVQDHGQPPLSATVTLTVAVADSIPD 670

Query: 233 IMHFPEAIVQQASSKLNSGTSSTVLIILGVVLIVLGFVIILLILYI---HKNKHTKNNG 288
           ++    +I   A+S  +  T   V+ +  V  I L FVI+LL L +   HK++  + +G
Sbjct: 671 VLADLGSIRTPANSDDSDLTLYLVVAVAAVSCIFLAFVIVLLALRVRRWHKSRLLQASG 729



 Score = 45.8 bits (107), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 53/190 (27%), Positives = 81/190 (42%), Gaps = 17/190 (8%)

Query: 49  EYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGERFSI----SRQGDISLMQ 101
           +Y V+  EN+PV   LL V     ++  +  V Y       +   I    S  G++S ++
Sbjct: 246 QYQVTVPENVPVGTRLLAVNATDLDEGVNGEVTYSFRKITQKILQIFQLNSHTGELSTLE 305

Query: 102 CLDYETEDSYRFTVYATDTLMT-TSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLT 160
            LDYE    Y   V A D   + T A V I++++VND  P          +P     D  
Sbjct: 306 GLDYEDSGYYEMEVQAQDGPGSMTRAKVLITILDVNDNAPEVTVTSVSSSIPE----DTP 361

Query: 161 PGSVIGKVEAADGDKGDR----VTLSLRGPYEKMFSINDSGH-ISIVDLSALNTSTIQLV 215
           PG+VI      D D G       T+S   P++   SI++    ++  +L     S   + 
Sbjct: 362 PGTVIALFYLQDRDSGKNGEVTCTISENLPFKLERSIDNYYRLVTAENLDREKLSVYNIT 421

Query: 216 VVATDTGNPP 225
           + ATD G PP
Sbjct: 422 LKATDGGTPP 431



 Score = 40.8 bits (94), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 49/181 (27%), Positives = 87/181 (48%), Gaps = 21/181 (11%)

Query: 96  DISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLP 152
           ++ L + LD E E  +   + A+D      + +A + ++VV+VND  P F  PQY++ +P
Sbjct: 193 ELVLDRVLDREEEAVHHLLLTASDGGSPPRSGTARIRVTVVDVNDHAPVFFLPQYQVTVP 252

Query: 153 -HIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSI----NDSGHISIVD-L 204
            ++P+     G+ +  V A D D+G    VT S R   +K+  I    + +G +S ++ L
Sbjct: 253 ENVPV-----GTRLLAVNATDLDEGVNGEVTYSFRKITQKILQIFQLNSHTGELSTLEGL 307

Query: 205 SALNTSTIQLVVVATDT-GNPPRQASVPAIM----HFPEAIVQQASSKLNSGTSSTVLII 259
              ++   ++ V A D  G+  R   +  I+    + PE  V   SS +   T    +I 
Sbjct: 308 DYEDSGYYEMEVQAQDGPGSMTRAKVLITILDVNDNAPEVTVTSVSSSIPEDTPPGTVIA 367

Query: 260 L 260
           L
Sbjct: 368 L 368


>gi|195470324|ref|XP_002087458.1| GE15963 [Drosophila yakuba]
 gi|194173559|gb|EDW87170.1| GE15963 [Drosophila yakuba]
          Length = 3556

 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 65/214 (30%), Positives = 94/214 (43%), Gaps = 27/214 (12%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWL-------------SNDYGER 88
            F K EYSV+  E+  +N  ++ V     +   + R+ Y +             S+D  + 
Sbjct: 1036 FEKEEYSVNVSESRSINAQIIQVNASDLDTGNNARITYRIVDAGVDNVTNSISSSDVSQH 1095

Query: 89   FSI-SRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRY 144
            F I    G I L   LD ET D Y+  V ATD           V + V++ ND DP+F+ 
Sbjct: 1096 FGIFPNSGWIYLRAPLDRETRDRYQLMVLATDNGTPAAHAKTRVIVRVLDANDNDPKFQK 1155

Query: 145  PQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRG-PYEKMFSIND-SGHISIV 202
             +YE  +      +L  GSV+G V A+D D G+   +     P    F ++  +G IS  
Sbjct: 1156 SKYEFRIEE----NLRRGSVVGVVTASDLDLGENAAIRYSLLPINSSFQVHPVTGEISTR 1211

Query: 203  D-LSALNTSTIQLVVVATDTGNPPRQASVPAIMH 235
            + L         LVV A D G P R A VP  +H
Sbjct: 1212 EPLDRELRELYDLVVEARDQGTPVRSARVPVRIH 1245



 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 66/211 (31%), Positives = 103/211 (48%), Gaps = 17/211 (8%)

Query: 29  ATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGER 88
           AT++V+    +  E  F ++ Y+VS  EN PV   +L V+ + P D  V   ++   GE 
Sbjct: 595 ATVLVTIHDVNDNEPIFDQSFYNVSVAENEPVGRCILKVSASDP-DCGVNAMVNYTIGEG 653

Query: 89  FS-------ISRQGDISLMQCLDYETEDSYRFTVYATDT-LMTTSATVNISVVNVNDWDP 140
           F         S  G+I +   LD+E   SY F V ATD   ++T+A + + + +VND  P
Sbjct: 654 FKHLTEFEVRSASGEICIAGELDFERRSSYEFPVLATDRGGLSTTAMIKMQLTDVNDNRP 713

Query: 141 RFRYPQYELFLPHIPLADLTPGSV-IGKVEAADGDKGDRVTLSLR---GPYEKMFSINDS 196
            F   +Y++ L   P A     S  I  V A D D G+   +S R   G    +F I+ S
Sbjct: 714 VFYPREYKVSLRESPKAPTQASSTPIVAVVATDPDSGNFGQVSYRIVAGNEAGIFRIDRS 773

Query: 197 -GHISIV--DLSALNTSTIQLV-VVATDTGN 223
            G I +   D+ ++ T  + ++ + ATD GN
Sbjct: 774 TGEIFVARPDMLSVRTQPMHMLNISATDGGN 804



 Score = 60.8 bits (146), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 61/201 (30%), Positives = 102/201 (50%), Gaps = 21/201 (10%)

Query: 44   QFSKNEYSVSALENLPVNYVLL---TVTTNKPRDLRVKYWLSNDYGERFSI-SRQGDISL 99
            +F  ++Y+ S  E+ P+   +L    V  +   + R+ Y L+N+   +F+I S+ G I+ 
Sbjct: 1951 RFKLSKYTGSVQEDAPLGTSVLQINAVDADLGVNARLVYSLANETQWQFAIDSQSGLITT 2010

Query: 100  MQCLDYETEDSYRFTVYATD----TLMTTSATVNISVVNVNDWDPRF-RYPQYELFLPHI 154
            +  LD E + SY F V A D     + + +  V I+V+++ND  P F RYP    ++  +
Sbjct: 2011 VGKLDRELQASYNFMVLAMDGGRYEVRSATVPVQINVLDINDNRPVFERYP----YIGQV 2066

Query: 155  PLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKM---FSINDS-GHISIVD-LSAL 207
            P A + PG  + KV+A D D G    +  SL      +   F IN S G +S    L++ 
Sbjct: 2067 P-ALIQPGQTLLKVQALDADLGANAEIVYSLNAENSAVSAKFRINPSTGALSASQSLASE 2125

Query: 208  NTSTIQLVVVATDTGNPPRQA 228
            +   + L V+A D G PP+ +
Sbjct: 2126 SGKLLHLEVIARDKGTPPQSS 2146



 Score = 47.0 bits (110), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 53/186 (28%), Positives = 83/186 (44%), Gaps = 26/186 (13%)

Query: 76   RVKYWLSNDYGER-FSI-SRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNI 130
            +V Y L  D G+R F+I +R G + L Q LDYE+   +   V ATD     ++T+ T+ +
Sbjct: 965  QVSYSLVGDSGKRLFAIDARSGHLILSQHLDYESSQRHSLIVTATDGGVPSLSTNLTILV 1024

Query: 131  SVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR------ 184
             V +VND  P F   +Y + +        +  + I +V A+D D G+   ++ R      
Sbjct: 1025 DVQDVNDNPPVFEKEEYSVNVSE----SRSINAQIIQVNASDLDTGNNARITYRIVDAGV 1080

Query: 185  ---------GPYEKMFSI-NDSGHISI-VDLSALNTSTIQLVVVATDTGNPPRQASVPAI 233
                         + F I  +SG I +   L        QL+V+ATD G P   A    I
Sbjct: 1081 DNVTNSISSSDVSQHFGIFPNSGWIYLRAPLDRETRDRYQLMVLATDNGTPAAHAKTRVI 1140

Query: 234  MHFPEA 239
            +   +A
Sbjct: 1141 VRVLDA 1146



 Score = 46.2 bits (108), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 49/155 (31%), Positives = 72/155 (46%), Gaps = 19/155 (12%)

Query: 95   GDISLMQCLDYETEDSYRFTVYATDT------LMTTSATVNISVVNVNDWDPRFRYPQYE 148
            G +SL   LD+ET   Y   V A D        + TS TV + V++ ND  P+F  P   
Sbjct: 1549 GSLSLQAPLDFETVQEYLLIVQALDQSSNVTERLQTSVTVRLRVLDANDNAPQFVSPNSS 1608

Query: 149  LF-LPHIPLADLTP-GSVIGKVEAADGDKGD--RVTLSLRGPY-EKMFSIN-DSGHISIV 202
                  + ++D T  G V+  + A D D GD  R+T  + G   E  F IN  +G I +V
Sbjct: 1609 GGKTASLSISDATRIGEVVAHIVAVDRDSGDNGRLTYEITGGNGEGRFRINSQTGIIELV 1668

Query: 203  DLSALNTSTIQ------LVVVATDTGNP-PRQASV 230
                  T  ++      L++ A D G P P+Q+S+
Sbjct: 1669 KSLPPATEDVEKGGRFNLIINAKDHGQPEPKQSSL 1703



 Score = 46.2 bits (108), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 57/209 (27%), Positives = 88/209 (42%), Gaps = 39/209 (18%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGERFSISRQ--------- 94
            +F K++Y     ENL    V+  VT +   DL        D GE  +I            
Sbjct: 1152 KFQKSKYEFRIEENLRRGSVVGVVTAS---DL--------DLGENAAIRYSLLPINSSFQ 1200

Query: 95   -----GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQ 146
                 G+IS  + LD E  + Y   V A D    + +    V I V +VND  P    PQ
Sbjct: 1201 VHPVTGEISTREPLDRELRELYDLVVEARDQGTPVRSARVPVRIHVSDVNDNAPEIADPQ 1260

Query: 147  YELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRG---PYEKMFSINDSGHI- 199
             ++        +  PG+ + +V A D D G   +++   ++G       +FSI+ S  + 
Sbjct: 1261 EDVVSVR---EEQPPGTEVVRVRAVDRDHGQNASITYSIVKGRDSDGHGLFSIDPSSGVI 1317

Query: 200  -SIVDLSALNTSTIQLVVVATDTGNPPRQ 227
             + V L     S  +L V A+D G+PPR+
Sbjct: 1318 RTRVVLDHEERSIYRLGVAASDGGSPPRE 1346



 Score = 45.4 bits (106), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 59/207 (28%), Positives = 94/207 (45%), Gaps = 27/207 (13%)

Query: 45  FSKNEYSVSALENLPVNYVLLTV---TTNKPRDLRVKYWLS---NDYGERFSIS-RQGDI 97
           F+++ Y  +  EN  V   +L V    T+   +  V+Y ++   +D  + F I  R G I
Sbjct: 286 FNQSRYFATVPENATVGTSVLQVYASDTDADENGLVEYAINRRQSDKEQMFRIDPRTGAI 345

Query: 98  SLMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFL--- 151
            + + LD+ET++ +   V A D     + T+A V+I V +VND  P        +FL   
Sbjct: 346 YINKALDFETKELHELVVVAKDHGEQPLETTAFVSIRVTDVNDNQPTINV----IFLSDD 401

Query: 152 --PHIPLADLTPGSVIGKVEAADGDKGDR-----VTLSLRGPYEKMFSINDSGHISIVDL 204
             P I  +   PG  + ++   D D         VTL+    +  + + ++S ++ IV L
Sbjct: 402 ASPKISES-AQPGEFVARISVHDPDSKTEYANVNVTLNGGDGHFALTTRDNSIYLVIVHL 460

Query: 205 SALN--TSTIQLVVVATDTGNPPRQAS 229
                  S   L VVATD G PP  AS
Sbjct: 461 PLDREIVSNYTLSVVATDKGTPPLHAS 487



 Score = 43.9 bits (102), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 41/122 (33%), Positives = 59/122 (48%), Gaps = 16/122 (13%)

Query: 74   DLRVKYWL---SNDYGER-FSISRQ-GDISLMQCLDYETEDSYRFTVYATDTLMT----- 123
            DLRV Y L   + D  E  F I R  G++ + + LD E +  +R  + A DT  T     
Sbjct: 1407 DLRVTYTLNPLTKDLIEAAFDIDRHSGNLVVARLLDREVQSEFRLEIRALDTTATNNPQS 1466

Query: 124  TSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTP-GSVIGKVEAADGDKGDRVTLS 182
            ++ TV I V +VND  P   +PQ  + L    +++ TP G++I    A D D G    L 
Sbjct: 1467 SAITVKIEVADVNDNAP--EWPQDPIDL---QVSEATPVGTIIHNFTATDADTGTNGDLQ 1521

Query: 183  LR 184
             R
Sbjct: 1522 YR 1523



 Score = 42.7 bits (99), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 63/229 (27%), Positives = 105/229 (45%), Gaps = 17/229 (7%)

Query: 9    QPITLV-VRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTV 67
            QP+ ++ + A    N    A A + +S      R   F K  Y+    E++P   V+ +V
Sbjct: 790  QPMHMLNISATDGGNLRSNADAVVFLSIIDAMQRPPIFEKARYNYYVKEDIPRGTVVGSV 849

Query: 68   ---TTNKPRDLRVKYWL-SNDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYAT--DT 120
               + +      V+Y + S D    FSI +  G+I + + LD+E +      + AT  + 
Sbjct: 850  IAASGDIAHRSPVRYSIYSGDPDGYFSIETNSGNIRIAKPLDHEAKSQVLLNIQATLGEP 909

Query: 121  LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGD--R 178
             +     VNI V +VND  P F      + +P    A+L  G+ +    A D D G   +
Sbjct: 910  PVYGHTQVNIEVEDVNDNAPEFEASMVRISVPES--AEL--GAPLYAAHAHDKDSGSSGQ 965

Query: 179  VTLSLRGPY-EKMFSIN-DSGHISIVD-LSALNTSTIQLVVVATDTGNP 224
            V+ SL G   +++F+I+  SGH+ +   L   ++    L+V ATD G P
Sbjct: 966  VSYSLVGDSGKRLFAIDARSGHLILSQHLDYESSQRHSLIVTATDGGVP 1014



 Score = 38.5 bits (88), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 30/108 (27%), Positives = 46/108 (42%), Gaps = 6/108 (5%)

Query: 92   SRQGDISLMQCLDYETEDSYRFTVYATDTLMTTSA-TVNISVVNVNDWDPRFRYPQYELF 150
            S  G ++     DYE    Y   + A+D     +   V + + + +++ P+F    Y   
Sbjct: 2918 SETGLVTSAFVFDYEQRQRYDMELLASDMGGKKAGVAVRVEIESRDEFTPQFTERTYRFV 2977

Query: 151  LPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDS 196
            LP      L  G V+G+V A D D G   RV   L  P+   F +N S
Sbjct: 2978 LP--AAVALPQGYVVGQVTATDSDSGPDGRVVYQLSAPHSH-FKVNRS 3022



 Score = 37.7 bits (86), Expect = 8.3,   Method: Compositional matrix adjust.
 Identities = 41/140 (29%), Positives = 63/140 (45%), Gaps = 14/140 (10%)

Query: 96  DISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLP 152
           D+ +   LD ET   Y   + A D     +    TVNI++ +VND  P F   +Y   +P
Sbjct: 237 DLQISGFLDRETTPGYSLLIEALDGGTPPLRGFMTVNITIQDVNDNQPIFNQSRYFATVP 296

Query: 153 HIPLADLTPGSVIGKVEAADGDKGDRVTLSL-----RGPYEKMFSIN-DSGHISIVDLSA 206
                + T G+ + +V A+D D  +   +       +   E+MF I+  +G I I     
Sbjct: 297 E----NATVGTSVLQVYASDTDADENGLVEYAINRRQSDKEQMFRIDPRTGAIYINKALD 352

Query: 207 LNTSTI-QLVVVATDTGNPP 225
             T  + +LVVVA D G  P
Sbjct: 353 FETKELHELVVVAKDHGEQP 372


>gi|170295851|ref|NP_061234.2| protocadherin 7 isoform 2 precursor [Mus musculus]
 gi|124297288|gb|AAI31968.1| Protocadherin 7 [Mus musculus]
 gi|148705745|gb|EDL37692.1| protocadherin 7, isoform CRA_d [Mus musculus]
          Length = 1069

 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 62/203 (30%), Positives = 92/203 (45%), Gaps = 21/203 (10%)

Query: 37  GTSLRELQFSKNEYSVSALENLPVNYV--LLTVTTNKPRDLRVKYWLSNDYGERFSIS-R 93
           G S+ E+ F +N        N+P   V  +L    +  ++  + Y L +     F+I   
Sbjct: 536 GQSVVEVYFPEN--------NIPGERVATVLATDADSGKNAEIAYSLDSSVMGTFAIDPD 587

Query: 94  QGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELF 150
            GDI +   LD E  D Y F V A D    ++  S TV + V + ND DP+F    +  +
Sbjct: 588 SGDILVNTVLDREQTDRYEFKVNAKDKGIPVLQGSTTVIVQVADKNDNDPKFMQDVFTFY 647

Query: 151 LPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSI-NDSGHI-SIVDLSAL 207
           +      +L P S +G V   D DKG    +SL       +FSI ND+G I S +     
Sbjct: 648 VKE----NLQPNSPVGMVTVMDADKGRNAEMSLYIEENSNIFSIENDTGTIYSTMSFDRE 703

Query: 208 NTSTIQLVVVATDTGNPPRQASV 230
           + +T    V A D G+PPR A+ 
Sbjct: 704 HQTTYTFRVKAVDGGDPPRSATA 726



 Score = 45.4 bits (106), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 78/316 (24%), Positives = 133/316 (42%), Gaps = 46/316 (14%)

Query: 30  TLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVT---TNKPRDLRVKYWLSNDYG 86
           T+IV  A  +  + +F ++ ++    ENL  N  +  VT    +K R+  +  ++  +  
Sbjct: 624 TVIVQVADKNDNDPKFMQDVFTFYVKENLQPNSPVGMVTVMDADKGRNAEMSLYIEEN-S 682

Query: 87  ERFSISRQ-GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRF 142
             FSI    G I      D E + +Y F V A D      + +ATV++ V++ ND  P  
Sbjct: 683 NIFSIENDTGTIYSTMSFDREHQTTYTFRVKAVDGGDPPRSATATVSLFVMDENDNAPTV 742

Query: 143 RYPQ---YELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIND- 195
             P+   Y L  P   +      +V+  V A D D G    L+   + G   K+F I+  
Sbjct: 743 TLPRNISYTLLPPSSNVR-----TVVATVLATDSDDGINADLNYSIVGGNPFKLFEIDST 797

Query: 196 SGHISIV-DLSALNTSTIQLVVVATDTGNPPRQA----------SVPAIMHFPEAIVQQA 244
           SG +S+V  L+  +    +LVV   D+G P +            SV         IV+  
Sbjct: 798 SGVVSLVGKLTQKHYGLHRLVVQVNDSGQPSQSTTTLVHVFVNESVSNATVIDSQIVRSL 857

Query: 245 SSKLNSG---------TSSTVLIILGVVLIVLGFVIILLILYIHKNKHTKN-NGPPGSSH 294
            + L            +   + I++GVV  ++  ++I+LI+ + +   +KN NG      
Sbjct: 858 HTPLTQDIAGDPSYEISKQRLSIVIGVVAGIMTVILIILIVMMARYCRSKNKNGYEAGKK 917

Query: 295 SKNDSFLSNVILPEKH 310
              D F      P++H
Sbjct: 918 DHEDFF-----TPQQH 928



 Score = 40.8 bits (94), Expect = 0.98,   Method: Compositional matrix adjust.
 Identities = 40/160 (25%), Positives = 71/160 (44%), Gaps = 26/160 (16%)

Query: 93  RQGDISLMQCLDYETEDSYRFTVY---ATDTLMTTSATVNISVVNVNDWDPRFRYPQYEL 149
           +Q  + +   LD E  DSY  T+      D   ++ A + + + +VND  PRF    YE 
Sbjct: 256 KQPQLIVKGALDREQRDSYELTLRVRDGGDPPRSSQAILRVLITDVNDNSPRFEKSVYEA 315

Query: 150 FLPHIPLADLTPGSVIGKVEAADGDKG---------DRVTLSLRGPYEKMFSIND-SGHI 199
            L      +  PG+ I ++ A D D G            T S+R    ++  +++ SG +
Sbjct: 316 DLAE----NSAPGTPILQLRATDLDVGVNGQIEYVFGAATESVR----RLLRLDETSGWL 367

Query: 200 SI---VDLSALNTSTIQLVVVATDTGNPPRQASVPAIMHF 236
           S+   +D   +N   ++  V+A D G PP+      +++ 
Sbjct: 368 SVLHRIDREEVN--QLRFTVMARDRGQPPKTDKATVVLNI 405


>gi|363729524|ref|XP_417264.3| PREDICTED: protocadherin-16 [Gallus gallus]
          Length = 3258

 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 75/269 (27%), Positives = 118/269 (43%), Gaps = 37/269 (13%)

Query: 1    DINEDDFLQPITLVV---RAIQYDNQDRYALATLIVSKAGTSLRELQ------------- 44
            D  +D  L P++ V+   RA+  +    Y+L T++V   GT  R                
Sbjct: 1756 DPEQDFILDPVSGVLSTARALDREQVAFYSL-TVVVQDHGTPPRSATMTVNVRVLDLNDN 1814

Query: 45   ---FSKNEYSVSALENLPVNYVLLTVTTNKPRDL---RVKYWLSNDYGERFSISRQ-GDI 97
               F++  Y V   E+LPV  ++L +    P +    +V Y+L N+    F I  Q G I
Sbjct: 1815 APGFAQASYVVEVPEDLPVGSLVLQLEAEDPDEGTNGQVTYYLGNESLGMFQIEPQSGRI 1874

Query: 98   SLMQCLDYETEDSYRFTVYATDTL----MTTSATVNISVVNVNDWDPRFRYPQYELFLP- 152
               Q LD E + SY F   A D+      + +  V ++V +VND  P F +    + L  
Sbjct: 1875 RSAQELDRERQPSYSFLAKAVDSAPWEPKSAAVRVTVTVQDVNDHAPAFLHSPVTVSLSR 1934

Query: 153  HIPLADLTPGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSIND-SGHISIVD-LSALNT 209
            H PL       V+  + A D D G   ++  R       FSIN  +G I ++  LS+L+ 
Sbjct: 1935 HTPLK-----QVVATMRAEDRDAGANASILYRLATPNSAFSINSYTGDIQLLQPLSSLSQ 1989

Query: 210  STIQLVVVATDTGNPPRQASVPAIMHFPE 238
                L ++ATD G P   ++   ++H  E
Sbjct: 1990 RQRTLFILATDLGQPALSSTGVVVIHVQE 2018



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 62/205 (30%), Positives = 91/205 (44%), Gaps = 29/205 (14%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTT--NKPRDLRVKYWLSNDYGERFS---ISRQGDISL 99
            F    Y V   E +PV+   L V        D+ + Y L  D G+  S   +S  G + +
Sbjct: 974  FDTLTYRVEVREGVPVSTRFLQVRALARDAEDVTLTYHLRAD-GDAASFGIMSESGWLYV 1032

Query: 100  MQCLDYETEDSYRFTVYATDTLM--------TTSATVNISVVNVNDWDPRFRYPQYELFL 151
               LD ET D Y  TV A+            T ++TV IS+ + ND  PR    +Y   +
Sbjct: 1033 KSALDRETRDLYVLTVLASAGGSGSGGEARKTGTSTVRISITDENDNSPRLSEERYFFTV 1092

Query: 152  PHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSINDSGHISIVDLSALNT- 209
            P     +  PGS +G+V A+D D G    L+ R   ++  F I    H    +LS  ++ 
Sbjct: 1093 PE----NQAPGSSVGRVMASDRDAGQNSRLTYRLLQHDSNFLI----HTQTGELSTKHSL 1144

Query: 210  -----STIQLVVVATDTGNPPRQAS 229
                 S+ QL+V+  D G PPR A+
Sbjct: 1145 DRELQSSYQLLVIVQDGGAPPRSAT 1169



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 52/151 (34%), Positives = 72/151 (47%), Gaps = 13/151 (8%)

Query: 81   LSNDYGERFSISRQGD-ISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWD 139
            L  D    FS+ R G  I+L   LDYE    Y  T+ A+DT   T A + + V ++ND  
Sbjct: 2273 LDGDAVGTFSVLRYGGRIALTGPLDYEQRSHYSLTLRASDTRHETEANLTVIVEDMNDNA 2332

Query: 140  PRFRYPQYELFLP-HIPLADLTPGSVIGKVEAADGDKGDR--VTLSLRGPYEKMFSINDS 196
            P F  P Y++ LP H P      GS++  + A D D G    +T  L  P   +     +
Sbjct: 2333 PAFSQPFYQVTLPEHTPA-----GSILLTMSATDMDSGSNGDITFHLAVPSLDVAIDPSN 2387

Query: 197  G---HISIVDLSALNTSTIQLVVVATDTGNP 224
            G    I  V+  A N  T++LVV A D G+P
Sbjct: 2388 GTLFTIRPVEFDA-NQPTLELVVEARDRGSP 2417



 Score = 51.6 bits (122), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 64/210 (30%), Positives = 96/210 (45%), Gaps = 19/210 (9%)

Query: 29  ATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVT-TNKPRDL--RVKYWLSNDY 85
           A ++V+    +  E  F  N Y+VS  EN PV    L VT T+    L   + Y L +  
Sbjct: 539 AVVLVALQDVNDNEPVFRSNFYNVSLKENTPVGTCFLQVTATDADSGLFGSLSYSLGSGI 598

Query: 86  GE----RFSISRQ-GDISLMQCLDY-ETEDSYRFTVYATD-TLMTTSATVNISVVNVNDW 138
           G     +FSI +  G +   Q LD  E   +Y FT+ A D   + +   V + + ++ND 
Sbjct: 599 GSVVPTQFSIDKHTGHLCTTQPLDRDEGTSAYDFTITAVDGGGLNSMVYVKVFLEDINDN 658

Query: 139 DPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR---GPYEKMFSIN- 194
            P F    Y L           PG+ + +V A D D+G    ++ R   G    +FS+N 
Sbjct: 659 RPVF----YPLDYAASISTQSMPGTAVLRVTAHDKDEGMHGKVTYRIVLGNSPPLFSLNK 714

Query: 195 DSGHISIV-DLSALNTSTIQLVVVATDTGN 223
           D+G IS+   LS    + +QLV+ A D G 
Sbjct: 715 DTGVISLSWSLSGKANTLVQLVISAEDGGG 744



 Score = 48.9 bits (115), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 59/187 (31%), Positives = 88/187 (47%), Gaps = 18/187 (9%)

Query: 51   SVSALENLPVNYVLLTVTTNKPRDL----RVKYWLSNDYGE-RFSIS-RQGDISLMQCLD 104
            +VS  E+ P  +V L V      DL    RV Y L    G+ RF ++   G +S+++ L+
Sbjct: 1513 AVSVTEDRPTGFVALHVVAQD-NDLGENGRVSYSLRAGNGDGRFHLNPSTGALSVVRALN 1571

Query: 105  YETEDSYRFTVYATD-TLMTTSAT--VNISVVNVNDWDPRFRYPQYELFLPHIPLADLTP 161
             E    +  TV A D      SAT  ++I V++VND  P F  P+YE  +    + +L  
Sbjct: 1572 REEVVQHNLTVVAADHGFPRRSATQLLSILVLDVNDEAPTFEKPEYEAHV----MENLPA 1627

Query: 162  GSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSGHISIVDLSALNTSTIQ---LVVVA 218
            GS + +V A D D G    ++  G     FSI+    + IV    L+    +   L+V A
Sbjct: 1628 GSPVLQVLATDRDLGANGQVTYGGLSGGPFSIHPQTGL-IVTTHPLDREEQEQHVLMVYA 1686

Query: 219  TDTGNPP 225
             D G PP
Sbjct: 1687 QDGGLPP 1693



 Score = 48.1 bits (113), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 54/151 (35%), Positives = 69/151 (45%), Gaps = 20/151 (13%)

Query: 92   SRQGDISLMQCLDYETEDSYRFTVYATDTL------MTTSATVNISVVNVNDWDPRFRYP 145
            SR G +SL Q LD E   S+   V ATD         +++ T  + V +VND  P F  P
Sbjct: 1452 SRSGLLSLHQSLDREAVASFLLVVEATDQARNVSQRRSSAVTARVFVTDVNDNAPVFLSP 1511

Query: 146  QYELFLPHIPLADLTPGSVIGKVEAADGDKGD--RVTLSLR-GPYEKMFSINDS-GHISI 201
                     P      G V   V A D D G+  RV+ SLR G  +  F +N S G +S+
Sbjct: 1512 AAVSVTEDRPT-----GFVALHVVAQDNDLGENGRVSYSLRAGNGDGRFHLNPSTGALSV 1566

Query: 202  VDLSALNTSTI---QLVVVATDTGNPPRQAS 229
            V   ALN   +    L VVA D G P R A+
Sbjct: 1567 V--RALNREEVVQHNLTVVAADHGFPRRSAT 1595



 Score = 47.8 bits (112), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 47/168 (27%), Positives = 76/168 (45%), Gaps = 31/168 (18%)

Query: 84  DYGE-------------RFSISRQGDISLMQC----LDYETEDSYRFTVYATDT---LMT 123
           DYGE             +F+++ + +I  + C    LD E  DSY   V ATD+    + 
Sbjct: 370 DYGEYSNVNVTLEGGDGKFALTTKDNIIYLICVDQLLDREERDSYDLRVTATDSGTPPLR 429

Query: 124 TSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTL 181
             +T  + V+++ND  P F   +Y+  +P +    + PGS + +V A D D+G    V  
Sbjct: 430 AESTFVLQVIDINDNPPLFDQQEYKQSIPEV----VYPGSFVLQVTARDKDQGPNGEVQY 485

Query: 182 SL---RGPYEKMFSINDSGHI--SIVDLSALNTSTIQLVVVATDTGNP 224
           S+      +   F+I+ +  I  +   L        QL V+ATD G P
Sbjct: 486 SIVHSHDTHSSWFAIDPATGIITTAAPLDYEKDPQPQLTVLATDRGTP 533



 Score = 47.0 bits (110), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 58/199 (29%), Positives = 84/199 (42%), Gaps = 21/199 (10%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSND--YGERFSISRQ-GDISLMQ 101
            F K EY    +ENLP    +L V     RDL     ++     G  FSI  Q G I    
Sbjct: 1612 FEKPEYEAHVMENLPAGSPVLQVLATD-RDLGANGQVTYGGLSGGPFSIHPQTGLIVTTH 1670

Query: 102  CLDYETEDSYRFTVYATDTLMT---TSATVNISVVNVNDWDPRFRYPQYELFLP----HI 154
             LD E ++ +   VYA D  +    + ATV I+V + ND  P+       + +P     +
Sbjct: 1671 PLDREEQEQHVLMVYAQDGGLPPNLSKATVRITVGDENDHTPQLESESCSVEVPENQSRV 1730

Query: 155  PLADLTPGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSIND-SGHISIVD-LSALNTST 211
             L  L       +    DGD+  R+   +  G  E+ F ++  SG +S    L     + 
Sbjct: 1731 ALYTL-------RATDPDGDENGRLEYRVADGDPEQDFILDPVSGVLSTARALDREQVAF 1783

Query: 212  IQLVVVATDTGNPPRQASV 230
              L VV  D G PPR A++
Sbjct: 1784 YSLTVVVQDHGTPPRSATM 1802



 Score = 45.1 bits (105), Expect = 0.062,   Method: Compositional matrix adjust.
 Identities = 43/145 (29%), Positives = 65/145 (44%), Gaps = 11/145 (7%)

Query: 48   NEYSVSALENLPVNYVLLTVTTNKPRDLR---VKYWLSNDYGERFSI-SRQGDISLMQCL 103
             E  V  LE  P   ++ ++    P +     + Y L+  + ERF++ +  G++     L
Sbjct: 1193 QELPVQVLEEKPSGLLVASLQAKDPDEGENGTITYSLTGAWAERFTLHTATGELRTATVL 1252

Query: 104  DYETEDSYRFTVYATDTLM---TTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLT 160
                   Y FTV A+D  M   TTSA V I V+  +   PR   P   + L   PL  + 
Sbjct: 1253 RRADRAEYVFTVTASDRGMVPCTTSAIVRIQVLPSSRLLPR---PDATV-LTLQPLEGVR 1308

Query: 161  PGSVIGKVEAADGDKGDRVTLSLRG 185
            PGSVIG V   D     ++T ++ G
Sbjct: 1309 PGSVIGSVAPPDAPARGQLTYTVIG 1333



 Score = 42.4 bits (98), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 61/200 (30%), Positives = 85/200 (42%), Gaps = 26/200 (13%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNK----PRDLRVKYWLSN-DYGERFSISRQ-GDIS 98
            F++ EY  +  E+ P    LL +T +     PR   V Y +S+ D    F I    G + 
Sbjct: 2555 FARAEYRTAVSESTPPGTELLRLTAHDADSGPRG-HVHYSISSGDQHGLFQIHESTGALC 2613

Query: 99   LMQCLDYETEDSYRFTVYATDTLMTTSA--TVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
            L + LD ET+ S+   V ATD      A   V I V +VND  P F     E+    +  
Sbjct: 2614 LARPLDRETQASHALVVQATDVPGGHFALVPVAIEVKDVNDNKPYF---PVEVLSASM-R 2669

Query: 157  ADLTPGSVIGKVEAADGDKGDRVTLSLR-------GP----YEKMFSIN-DSGHI-SIVD 203
             +L PG+++  + A D D G    L          GP        F+IN  SG + S + 
Sbjct: 2670 ENLPPGTLVTTLRAIDTDTGVFGELQYAVLEQPAGGPGVAEGRDAFAINSSSGELRSRLT 2729

Query: 204  LSALNTSTIQLVVVATDTGN 223
                     QL+V ATD GN
Sbjct: 2730 FDYERAKAFQLLVRATDAGN 2749



 Score = 40.4 bits (93), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 26/85 (30%), Positives = 43/85 (50%), Gaps = 7/85 (8%)

Query: 96  DISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLP 152
           D+ +   LD E   SY   + A D      ++  T+++S+ ++ND  P F   +Y   + 
Sbjct: 182 DLVVSNVLDRENRSSYSLVLEAYDGGTPPRSSQMTLDVSIQDINDNAPAFNQSRYHTLIS 241

Query: 153 HIPLADLTPGSVIGKVEAADGDKGD 177
                +L PGS I +V A+D D+GD
Sbjct: 242 E----NLKPGSSILQVFASDADEGD 262



 Score = 38.9 bits (89), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 19/53 (35%), Positives = 31/53 (58%), Gaps = 4/53 (7%)

Query: 122  MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGD 174
            +++ ATV + V++VND  P F+ P Y   +P     DL PG+ +  ++A D D
Sbjct: 2419 LSSWATVQLQVLDVNDHSPIFQVPHYNASVPE----DLRPGTTVLTLDAGDAD 2467



 Score = 38.9 bits (89), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 44/152 (28%), Positives = 62/152 (40%), Gaps = 25/152 (16%)

Query: 94  QGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLP- 152
           +G I   + LD ET D Y F     + +   +  VNI V ++ND  P F        +P 
Sbjct: 74  RGIIKTARVLDRETRDHYSFIAVTPEGI---TVEVNIQVNDINDHAPAFPKQHSTFQIPE 130

Query: 153 HIPLADLTPGSVIGKVEAADGD-----------KGDRVTLSLRGPYEKMFSINDSGHISI 201
           H P+     GS      A D D           KGD V  + R   E     N   ++ +
Sbjct: 131 HTPV-----GSRFPLDPAFDADSGLLNTQGYVIKGDNVGQAFR--LETRRGPNGVLYLDL 183

Query: 202 VDLSAL---NTSTIQLVVVATDTGNPPRQASV 230
           V  + L   N S+  LV+ A D G PPR + +
Sbjct: 184 VVSNVLDRENRSSYSLVLEAYDGGTPPRSSQM 215



 Score = 38.1 bits (87), Expect = 7.7,   Method: Compositional matrix adjust.
 Identities = 33/112 (29%), Positives = 53/112 (47%), Gaps = 8/112 (7%)

Query: 128 VNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRG 185
           V ISV +VND  P F  P   + LP        PG+ +  ++A D D G   +V   L  
Sbjct: 856 VKISVSDVNDNAPTFPSPSDSILLPEA----TEPGTTVYTLQAEDRDNGANGQVNFELVS 911

Query: 186 PYEKMFSIN-DSGHISIVD-LSALNTSTIQLVVVATDTGNPPRQASVPAIMH 235
             +  FS+   SG + +V  L    ++  +L +VA D+G P   ++   ++H
Sbjct: 912 GGDGTFSVERSSGAVRLVGVLQYEASAAYRLSIVARDSGVPQLSSTFTLLVH 963


>gi|410909630|ref|XP_003968293.1| PREDICTED: protocadherin Fat 3-like [Takifugu rubripes]
          Length = 4673

 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 71/227 (31%), Positives = 105/227 (46%), Gaps = 21/227 (9%)

Query: 25   RYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDL----RVKYW 80
            R+++ TL V     +     F  + Y   ALE+LPV  VL  + T  P DL    +V+Y 
Sbjct: 976  RFSVTTLKVILEDVNDCPPAFIPSAYKTRALEDLPVGTVLAWLETQDP-DLGSGGQVQYS 1034

Query: 81   LSNDYGERFSISR-QGDISLMQCLDYETEDSYRFTVYATDT------LMTTSATVNISVV 133
            L+NDY   F + R  G I LM+ LDYET+  Y  +V A D       L  TS  + +  V
Sbjct: 1035 LANDYNGWFEVDRTSGAIRLMKELDYETQQFYNLSVKAKDRGKPVSLLSVTSVEIEVVDV 1094

Query: 134  NVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGD--KGDRVTLSLR-GPYEKM 190
            N N + P F     +  L      +   G+ + +V A D D  +   +  S+R G     
Sbjct: 1095 NENLYAPYFS----QFALKATVKENARIGTTLLQVTANDDDASRDGEIQYSIRDGSGLGR 1150

Query: 191  FSIN-DSGHISIVDLSALNTS-TIQLVVVATDTGNPPRQASVPAIMH 235
            F+IN ++G I   D+    T  +  L V ATD G  P+ A++   + 
Sbjct: 1151 FAINEETGMIYTTDILDRETKDSYWLTVYATDRGVVPQFATIEVFIQ 1197



 Score = 58.5 bits (140), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 64/193 (33%), Positives = 86/193 (44%), Gaps = 15/193 (7%)

Query: 47   KNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYW----LSNDYGERFSIS-RQGDISLMQ 101
            K  Y+ S  E+L V+ V+L V      DL V  W    L       F I    G+I    
Sbjct: 3100 KAVYAASVPEDLSVHSVVLRVGATDA-DLGVNAWVQYSLHGPGSHDFRIDPDSGEIKTSV 3158

Query: 102  CLDYETEDSYRFTVYATD-TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLT 160
             LD E  DSYR    ATD       A V I V +VND  P F   Q+   +      D  
Sbjct: 3159 ILDRELTDSYRLLAQATDGGGRWCRAEVRIKVTDVNDNPPMFTQSQFSTSI----YEDTV 3214

Query: 161  PGSVIGKVEAADGDKGDR--VTLSLRGPYEKMFSINDSGHISIVD--LSALNTSTIQLVV 216
            P +++ +V A D D+G    VT SL     + FSI+ +  I +++  L     ST ++ V
Sbjct: 3215 PKALLTRVPAIDPDEGPGRIVTYSLVDDAGRSFSIDKTSGILVLERFLDREVQSTYRVTV 3274

Query: 217  VATDTGNPPRQAS 229
             ATD G P R +S
Sbjct: 3275 RATDWGAPTRLSS 3287



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 41/146 (28%), Positives = 72/146 (49%), Gaps = 11/146 (7%)

Query: 43   LQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGER---FSISRQ-GDIS 98
            LQF +  Y+ + +EN  V+ ++  V+  +        W     G     F + +  G I 
Sbjct: 1421 LQFDQPFYNFTVMENDKVSEIVGVVSLQQSS---TTVWFDITGGNSDSVFHVDKTVGTII 1477

Query: 99   LMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLAD 158
            + + LD E + SY  TV ATD   T    V+++V++ ND  P F  P Y++ +      D
Sbjct: 1478 IAKPLDAEQQPSYNLTVQATDGTKTAHTQVHVTVLDNNDNAPVFSQPTYDVTVSE----D 1533

Query: 159  LTPGSVIGKVEAADGDKGDRVTLSLR 184
            + P + + +V A+D DK  +++ SL+
Sbjct: 1534 IPPDAEVVQVVASDRDKHHQLSYSLQ 1559



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 65/224 (29%), Positives = 103/224 (45%), Gaps = 30/224 (13%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTN---KPRDLRVKYWLSNDYG-ERFSISRQ-GDISL 99
            FS+     +  EN  +   LL VT N     RD  ++Y + +  G  RF+I+ + G I  
Sbjct: 1103 FSQFALKATVKENARIGTTLLQVTANDDDASRDGEIQYSIRDGSGLGRFAINEETGMIYT 1162

Query: 100  MQCLDYETEDSYRFTVYATDT-LMTTSATVN--ISVVNVNDWDPRFRYPQYELFLPHIPL 156
               LD ET+DSY  TVYATD  ++   AT+   I V +VND  P      Y+  + H   
Sbjct: 1163 TDILDRETKDSYWLTVYATDRGVVPQFATIEVFIQVEDVNDNAPLTSEAMYQCTV-HENS 1221

Query: 157  ADLTPGSVIGKVEAADGDKG----DRVTLS-LRGPYEKMFSIN-DSGHISIVD--LSALN 208
             D   G  + +++A D D      D+++   + G  + +F+IN ++G I+     L    
Sbjct: 1222 PD---GVSVIQIQAQDPDDTALSPDKLSYHIISGNPQNLFTINTNTGLITTTSRKLDREQ 1278

Query: 209  TSTIQLVVVATDTGNPPRQASVPAIMH----------FPEAIVQ 242
             +   L V+ +D+G  P+ + V   +           FPE I Q
Sbjct: 1279 QAEHNLEVMVSDSGPSPKHSVVWVTVRVLDENDNKPIFPEKIYQ 1322



 Score = 47.8 bits (112), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 48/151 (31%), Positives = 68/151 (45%), Gaps = 12/151 (7%)

Query: 83   NDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDTL---MTTSATVNISVVNVNDWD 139
            N++G+     R G I + Q LDYET   Y  TV A D     ++   TVNI++ +VND  
Sbjct: 3348 NEHGKFHIQPRTGAILVSQPLDYETCRDYFLTVEARDGGTPPLSAITTVNINITDVNDNA 3407

Query: 140  PRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDK---GDRVTLSLRGPYEKMFSINDS 196
            P F    Y   +      D   G  + +V A D D    GD +   + G     FSI+ +
Sbjct: 3408 PVFSCQLYTAVVSE----DAAMGDSVIQVVAEDVDSKPNGDVLYTIIAGNQGNQFSIDPT 3463

Query: 197  GHISIV--DLSALNTSTIQLVVVATDTGNPP 225
              I  V  +L   +  +  L + A DTG PP
Sbjct: 3464 SGIIRVNKELDRESVPSYSLAISACDTGIPP 3494



 Score = 43.1 bits (100), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 64/229 (27%), Positives = 99/229 (43%), Gaps = 37/229 (16%)

Query: 25   RYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPR---DLRVKYWL 81
            R++L ++ V           F ++ Y  S  E+ P+   + TV    P         + L
Sbjct: 2748 RHSLVSVYVHVVSPGAFIPSFLQHHYEFSVPEDTPIGTAVGTVHLKTPHGYASFSSVFTL 2807

Query: 82   SNDYGER------FSISRQ-GDISLMQCLDYETEDSYRFTVYAT------DTLMTTSATV 128
            +N   E+      F + +  G I L + LD+E    Y F V AT      D++  TS  V
Sbjct: 2808 NNGAMEKYNQDGVFVVEKDTGLIKLNKPLDHEVIKEYYFKVTATIQQTKIDSV--TSVDV 2865

Query: 129  NISVVNVNDWDPRFRYPQYEL-FLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSL-- 183
             + V+++ND  P F    YE   +  +PL+     + I +V+A D D G   +V  SL  
Sbjct: 2866 EVKVLDLNDNKPEFVTDAYEATVMEGVPLS-----TKILQVQALDADSGINGQVRYSLGD 2920

Query: 184  -------RGPYEKMFSIND-SGHISIV-DLSALNTSTIQLVVVATDTGN 223
                    G     FSI+  SG IS + DL   + S+    VVA+D G+
Sbjct: 2921 LIRSESDSGALFNTFSIDSKSGWISTLKDLDHESASSYVFTVVASDLGD 2969



 Score = 43.1 bits (100), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 55/203 (27%), Positives = 87/203 (42%), Gaps = 19/203 (9%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGERFSISR-QGDISLMQC 102
            +F + EY     EN+ V   ++TV+      L       N  G  F I++  G ++  + 
Sbjct: 1731 KFPQKEYLAIITENVAVGTSIITVSAVSQTTLTYDIKQGNAEG-VFRINQYSGVMTTRKS 1789

Query: 103  LDYETEDSYRFTVYATDTL-MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTP 161
            LDYE   SY   V A +   M ++AT+ I + + ND  P F+   Y   +      +   
Sbjct: 1790 LDYEKTPSYSLVVQAINMAGMASNATLIIQLKDENDNPPVFQQLHYRGSISEAAAVN--- 1846

Query: 162  GSVIGK-------VEAADGDKGDRVTL--SLRGPYEKMFSINDSGHISIVDLSALNTSTI 212
             SV+ +       ++A D D+ +   L   +     KMF   DSG  SI  ++AL+  T+
Sbjct: 1847 -SVVLESDDSPLVIKATDADRNENALLVYQIVEDVAKMFFTVDSGTGSIRTIAALDHETL 1905

Query: 213  ---QLVVVATDTGNPPRQASVPA 232
                  V   D+G P   A  PA
Sbjct: 1906 DTFHFHVFVRDSGRPSLTADGPA 1928



 Score = 41.6 bits (96), Expect = 0.61,   Method: Compositional matrix adjust.
 Identities = 66/237 (27%), Positives = 97/237 (40%), Gaps = 39/237 (16%)

Query: 27   ALATLIVSKAGTSLRELQFSKNEYSVSALEN-LPVNYVLLTVTTNKPRDLRVKYWLSNDY 85
            AL  ++V +A  S   L FS++ YS +  EN   V  V +        +  V Y L N  
Sbjct: 2027 ALVNVLVREALDS--GLSFSQSLYSSTIRENESAVTQVAVVNALGNHANEPVMYALLNG- 2083

Query: 86   GERFSISRQGDI--SLMQCLDYETEDSYRFTVYAT---DTLMTTSATVNISVVNVNDWDP 140
            G RF I R   +  +     D E ++ Y   V A    D L      + + V +VND  P
Sbjct: 2084 GVRFKIRRTSGVIQTTGISFDREEQEFYELVVEARREDDHLHVARVLLKVQVEDVNDNAP 2143

Query: 141  RFRYPQYELFLPHIPLA--DLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSGH 198
             F      + LP+      D  PG+ I +V A D DKG      + G +   + ++D GH
Sbjct: 2144 VF------VGLPYYAAVQVDAEPGTDIFRVMAIDHDKG------ING-HVSYYLLDDHGH 2190

Query: 199  ISIVDL-----------SALNTSTIQLVVVATDTGNPPRQASVPAIMHFPEAIVQQA 244
              I  L           S L+     +VV A D G+ P    + +   FP  +V +A
Sbjct: 2191 FEINKLTGILSLKKAFESDLSNVEYHMVVYARDHGSVP----LSSTTEFPITVVNKA 2243



 Score = 40.0 bits (92), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 52/190 (27%), Positives = 84/190 (44%), Gaps = 12/190 (6%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWL-SNDYGERFSIS-RQGDISLMQC 102
            F K+ Y +S  E++ V+  +L +    P+   + Y +   D   +F I    G I+++  
Sbjct: 2247 FDKSFYHISVNEDVAVHTPVLGINATSPKGQSIIYTIVDGDPSLQFDIGFDTGVITVVHP 2306

Query: 103  LDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDW--DPRFRYPQYELFLPHIPLADLT 160
            LDYE+   Y  TV ATD L    A V++ V   +     P F+   Y + L    +   T
Sbjct: 2307 LDYESAARYNLTVRATDYLTGARAEVDVDVAVKDVNDNQPVFQKMAYRVVLSETAMIG-T 2365

Query: 161  PGSVIGKVEAADGDKGDRVTLSLRGPYEKM--FSINDSGHISIVDLSALNTSTIQ---LV 215
            P   +   +  D DK + +   +   +     F I+ S  + I+    L+   +Q    V
Sbjct: 2366 PALHVSATD-KDSDKNNIIHYQIFSDHNSTDYFHIDSSSGL-ILTARLLDHELLQRYDFV 2423

Query: 216  VVATDTGNPP 225
            VVATD G PP
Sbjct: 2424 VVATDNGFPP 2433



 Score = 38.9 bits (89), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 54/201 (26%), Positives = 81/201 (40%), Gaps = 25/201 (12%)

Query: 12   TLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLL------ 65
            +LVV+AI        + ATLI+     +     F +  Y  S  E   VN V+L      
Sbjct: 1799 SLVVQAINMAGM--ASNATLIIQLKDENDNPPVFQQLHYRGSISEAAAVNSVVLESDDSP 1856

Query: 66   ----TVTTNKPRDLRVKYWLSNDYGERFSI--SRQGDISLMQCLDYETEDSYRFTVYATD 119
                    ++  +  + Y +  D  + F    S  G I  +  LD+ET D++ F V+  D
Sbjct: 1857 LVIKATDADRNENALLVYQIVEDVAKMFFTVDSGTGSIRTIAALDHETLDTFHFHVFVRD 1916

Query: 120  T-----LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGD 174
            +          A V I V++ ND  P+F    YE  L    L     G  + +V A D D
Sbjct: 1917 SGRPSLTADGPAEVTIQVIDTNDSPPQFSQTSYETVL----LLPTYVGVEVLQVTATDPD 1972

Query: 175  K--GDRVTLSLRGPYEKMFSI 193
            K     +T SL     + F+I
Sbjct: 1973 KDVSKNLTYSLTNGVLEHFAI 1993


>gi|395541765|ref|XP_003772809.1| PREDICTED: protocadherin Fat 4 [Sarcophilus harrisii]
          Length = 5148

 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 75/265 (28%), Positives = 118/265 (44%), Gaps = 44/265 (16%)

Query: 2    INEDD-----FLQPITLV---VRAIQYDNQDRYALATLIVSKAGTSLRELQ--------- 44
            +NEDD     FL P+T V    R++ Y+ +  Y L T      G     ++         
Sbjct: 2046 VNEDDEDGIFFLNPVTGVFNLTRSLDYETRQYYIL-TARAEDGGGQFMTIRIYFNILDVN 2104

Query: 45   -----FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWL-SNDYGERFSISRQG 95
                 FS   YS S +ENLP+   +L        D    ++ Y + S D   +F++ + G
Sbjct: 2105 DNPPVFSSTSYSTSLMENLPLGSTILIFNVTDADDGLNSQLSYSITSGDSLGQFTVDKNG 2164

Query: 96   DISLMQCLDYETEDSYRFTVYATDTLM------TTSATVNISVVNVNDWDPRFRYPQYEL 149
             + + Q LD E++  Y   +   D  +      T++A V+I +++VND  P F  P+   
Sbjct: 2165 ILKIRQTLDRESQSFYNLVIQVHDMPLSSTSSYTSTAQVSIILLDVNDNAPTFISPK--- 2221

Query: 150  FLPHIPLADLTP-GSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIND-SGHISIV-DL 204
             L ++P  + TP  +V+ K +A D D G    +  +L  P    FSI    G + +  +L
Sbjct: 2222 -LTYVP--ENTPTDTVVFKAQATDRDSGPNSYIEYTLLNPLGNKFSIGTIDGEVRLTGEL 2278

Query: 205  SALNTSTIQLVVVATDTGNPPRQAS 229
                 S   L VVATD G PP  +S
Sbjct: 2279 DREEVSNYTLTVVATDKGQPPLSSS 2303



 Score = 58.2 bits (139), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 59/186 (31%), Positives = 92/186 (49%), Gaps = 24/186 (12%)

Query: 56   ENLPVNYVLLTVTTNKPRDLRV----KYWLSNDYGERFSIS-RQGDISLMQCLDYETEDS 110
            EN P+ Y +  VTT+   D+ V    +Y ++ D    F+I+   GDI + + L+ E  D 
Sbjct: 2951 ENAPLGYTVTRVTTSD-EDIGVNAVSRYSIT-DTSLPFTINPSTGDIIISRPLNREDTDR 3008

Query: 111  YRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEA 170
            YR  V A D+  T S  V I V +VND  PRF+ P Y L  P   L ++  G+ + +V A
Sbjct: 3009 YRIRVSAHDSGWTVSTDVAIFVTDVNDNAPRFKKPSYYLDCPE--LTEI--GAKVAQVSA 3064

Query: 171  ADGDKGD--RVTLSLRGPYEKMFSIN-DSGHI---------SIVDLSALNTSTIQLVVVA 218
             D D+G   +V   ++   E  F IN  +G I         ++   S +N +    +V +
Sbjct: 3065 TDPDEGSNGQVFYFIKSQSE-FFRINATTGEIFNKQALRYRNVTGSSNVNINRHSFIVTS 3123

Query: 219  TDTGNP 224
            +D G+P
Sbjct: 3124 SDRGSP 3129



 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 58/190 (30%), Positives = 94/190 (49%), Gaps = 15/190 (7%)

Query: 56   ENLPVNYVLLTVTTNKPRDLRVKYWL-SNDYGERFSISR-QGDISLMQCLDYETEDSYRF 113
            E+ P+  ++ T+T +  R   + Y++ S + G  F I +  G +S+ Q LD+ET   Y  
Sbjct: 2746 ESQPIGTLITTITGSSSRGEPLSYFIASGNLGGAFHIDQLTGQVSISQQLDFETVQKYVV 2805

Query: 114  TVYATDTLM---TTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEA 170
             + A D      ++   + I+V++VND  P F+    + F+  I L +L+P +++  V A
Sbjct: 2806 WIEARDAGFPPFSSYEKLAIAVLDVNDNSPVFKD---DPFVAEI-LENLSPRTIL-TVSA 2860

Query: 171  ADGDKGDRVTLS---LRGPYEKMFSINDS-GHI-SIVDLSALNTSTIQLVVVATDTGNPP 225
             D D G    L    + G  E  FSI+ S G I SI  L     S   L V  +D G PP
Sbjct: 2861 IDKDSGPNGQLEYNIVNGNTENSFSIHHSTGEIRSIRSLDREKVSQYVLTVRCSDKGTPP 2920

Query: 226  RQASVPAIMH 235
            +  +V  I++
Sbjct: 2921 QSTTVTVIIN 2930



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/101 (31%), Positives = 49/101 (48%), Gaps = 5/101 (4%)

Query: 77   VKYWLSNDYGERFSIS-RQGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNV 135
            V Y + +   + F I    G++   + LD E    Y   V A D L ++   +NI++ +V
Sbjct: 1941 VTYAIISGADDSFHIDPESGELIATKRLDRERRSKYSLLVRADDGLQSSDMRINITISDV 2000

Query: 136  NDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG 176
            ND  P+F  P Y   +P     D TPGS++  + A D D G
Sbjct: 2001 NDHIPKFSRPVYSFDIPE----DTTPGSLVAAILATDDDSG 2037



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 56/191 (29%), Positives = 85/191 (44%), Gaps = 16/191 (8%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGERFSIS-RQGDISLM 100
            F   EYS + LEN P    ++ +     +   +  + Y L +   + F I    G I+  
Sbjct: 3362 FIPEEYSPTVLENAPSGTTVMRLNATDADSGSNAVIAYSLQSSDSDLFVIDPNSGVITTQ 3421

Query: 101  QCLDYETEDSYRFTVYA---TDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLA 157
              LDYET+ SY  TV A    D    + ATVNI +   N++ PRF    Y   +      
Sbjct: 3422 GFLDYETKQSYHLTVKAFNVPDEERCSFATVNIQLKGTNEYVPRFVSKLYYFEVSEA--- 3478

Query: 158  DLTPGSVIGKVEAADGD---KGDRVTLSLRGPYEKMFSIND-SGHISIVD-LSALNTSTI 212
              + G+V+G+V A+D D    G+   L      +K F IN  +G I +   L       I
Sbjct: 3479 -ASKGTVVGEVFASDRDMGVDGEVHYLIFGTSRKKGFQINSRTGQIYVSGFLDREKEERI 3537

Query: 213  QLVVVATDTGN 223
             L V+A ++G+
Sbjct: 3538 SLKVLAKNSGS 3548



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 50/160 (31%), Positives = 80/160 (50%), Gaps = 15/160 (9%)

Query: 77   VKYWLSNDYGERFSISR-QGDISLMQCLDYETEDSYRFTVYATDTL---MTTSATVNISV 132
            ++Y L N  G +FSI    G++ L   LD E   +Y  TV ATD     +++S  V + +
Sbjct: 2251 IEYTLLNPLGNKFSIGTIDGEVRLTGELDREEVSNYTLTVVATDKGQPPLSSSTEVAVII 2310

Query: 133  VNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGD----RVTLSLRGPYE 188
            +++ND +P F    Y++ +    L     G+ I +V AADGD+G     R +L L G   
Sbjct: 2311 LDINDNNPVFAKALYKVEINENTLT----GTDIVQVYAADGDEGTNGQVRYSL-LSGNEN 2365

Query: 189  KMFSIND-SGHISIVD-LSALNTSTIQLVVVATDTGNPPR 226
            + F I+  +G +S+   L     +   L V + D G+ PR
Sbjct: 2366 QEFRIDSVTGILSVAKPLDREKKAMYSLTVQSADRGSSPR 2405



 Score = 48.9 bits (115), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 45/156 (28%), Positives = 78/156 (50%), Gaps = 13/156 (8%)

Query: 89   FSI-SRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRY 144
            F+I S  G + L   LD+E   SY   + A D+    + ++ T++I +++ ND  P F  
Sbjct: 1424 FAIDSATGQVILAGQLDHEATASYSLLIQAVDSGTVSLNSTCTLSIDILDENDNTPSF-- 1481

Query: 145  PQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTL--SLRGPY-EKMFSIN-DSGHIS 200
            P+  LF+    L ++  G ++  V A D D GD   +  S+ G      FSI+ ++G I 
Sbjct: 1482 PKSTLFVD--VLENMRIGELVTSVTATDSDSGDNADIHYSITGTNNHGTFSISPNTGGIF 1539

Query: 201  IVDLSALNTSTI-QLVVVATDTGNPPRQASVPAIMH 235
            +       T  + +L + A D G PPR +++  ++H
Sbjct: 1540 LAKKLDFETQPLYKLNITAKDQGRPPRSSTMSVVIH 1575



 Score = 48.1 bits (113), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 51/178 (28%), Positives = 77/178 (43%), Gaps = 36/178 (20%)

Query: 89   FSISRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYP 145
            F +S  G++ + Q LD ET++     + ATD+    +T + TVN+ V +VND  P F + 
Sbjct: 2474 FILSASGELKVRQKLDRETKEKCILLITATDSGSPALTGTGTVNVIVSDVNDNVPTFAHK 2533

Query: 146  QYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR---GPYEKMFSINDSGHISIV 202
             Y   +      D   GS +  V A+D D      +S R   G     F+IN S    I+
Sbjct: 2534 TYSATISE----DAPTGSDVLLVSASDADASTNAVISYRLIGG--NSQFTINPSTG-QII 2586

Query: 203  DLSALNTSTIQ---LVVVATDTG--------------------NPPRQASVPAIMHFP 237
              + L+  T +   L+VV++D G                    NPPR    P + H P
Sbjct: 2587 TSALLDRETKENYTLIVVSSDGGFPEPLSSSTSVSVTVTDVNDNPPRFQHHPYVTHIP 2644



 Score = 47.0 bits (110), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 48/187 (25%), Positives = 96/187 (51%), Gaps = 12/187 (6%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDLR--VKYWLS-NDYGERFSISR-QGDISLM 100
            FS+  YS    EN+ + Y + +V+ +   DL   + Y ++  D    F+I++  G ++  
Sbjct: 959  FSQAVYSFVVFENVALGYHVGSVSAST-MDLNTNITYVITTGDQKGVFAINQVTGQLTTA 1017

Query: 101  QCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLT 160
              +D E +  Y+  V A+  ++T    VNI+V ++ND  P F      + +    + +  
Sbjct: 1018 SIIDREEQSFYQLKVVASGGMVTGETIVNITVKDLNDNAPHFLQAVEWVNV----VENWQ 1073

Query: 161  PGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIND-SGHISIVDLSALNTSTIQLVVV 217
             G  I + +A D D+G    V  SL+   + +F+I++ +G+IS++    ++  + Q+ ++
Sbjct: 1074 AGHSIFQAKALDPDEGINGMVLYSLKQNPKNLFTIDEKNGNISLLRPLDVHAGSYQVEIL 1133

Query: 218  ATDTGNP 224
            A+D G P
Sbjct: 1134 ASDRGVP 1140



 Score = 45.4 bits (106), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 59/211 (27%), Positives = 89/211 (42%), Gaps = 27/211 (12%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLS-NDYGERFSISRQGDISLM 100
            F +  Y V+  E  PVN +   V     +   +  + Y ++  + G  F I   G + + 
Sbjct: 1162 FDQLSYEVTLSEAQPVNSLFFKVQASDQDSGANGEIAYSIAEGNTGNAFGIFPDGQLYVK 1221

Query: 101  QCLDYETEDSYRFTVYATDTLMTT-SATVNISVV--NVNDWDPRFRYPQYELFLPHIPLA 157
              LD E +D Y   V A+D  +   SATVN++V+  +VND  P F    Y  +       
Sbjct: 1222 SELDRELQDRYVLLVVASDRAVEPLSATVNVTVILEDVNDNRPLFNSTNYVFYFEE---- 1277

Query: 158  DLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKM---FSIND-SGHISIV---DLSAL--- 207
            +   GS +G + A D D G      +R  +E M   F +N  SG I+     D  +L   
Sbjct: 1278 EQRGGSFVGMINAIDKDFGPNG--EVRYSFETMQPDFELNAISGEITSTHQFDRESLMRQ 1335

Query: 208  -NTSTIQLVVVATDTGNP---PRQASVPAIM 234
               +     V A+D G P     QA+V   M
Sbjct: 1336 RGAAVFSFTVTASDQGLPKPLKDQATVQVYM 1366



 Score = 44.3 bits (103), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 95/225 (42%), Gaps = 26/225 (11%)

Query: 25  RYALATLIVSKAGTSLRELQFSKNE-YSVSALENLPVNYVLLTVTTNKPRDL------RV 77
           + + A LIV+    +  +  FS+   Y VS  EN P    LL +  +   DL      R 
Sbjct: 728 KVSYAQLIVTVLDVNDEKPVFSQEAGYEVSVAENAPAGTDLLVIEASD-GDLGDNGTVRF 786

Query: 78  KYWLSNDYGERFSISR-QGDISLMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVV 133
            +  ++     F +    G +S +  LD E +  Y   V A D      T+   VN+S++
Sbjct: 787 SFQEADTEQRSFRLDPVSGRLSTISSLDREEQAFYSLLVLAVDLGSPPQTSLTRVNVSLL 846

Query: 134 NVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTL--SLRGPYEKMF 191
           +VND  P F   QY     HI   +   GS I  V A+D D G   T+  S+       F
Sbjct: 847 DVNDNSPVFYPVQY---FAHI-QENEPAGSYITTVSASDPDSGPNGTVKYSISAGDTSRF 902

Query: 192 SINDSGHISIVD----LSALNTSTIQLVVVATDTGN--PPRQASV 230
            I+   H  ++     L     +  QL VVATD G+   P QA V
Sbjct: 903 QIHS--HTGVISTKMVLDREEKTAYQLQVVATDGGHLQSPNQAIV 945



 Score = 41.6 bits (96), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 48/170 (28%), Positives = 86/170 (50%), Gaps = 19/170 (11%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLR----VKYWLS--NDYGERFSI-SRQGD 96
            +FS++  S +  E+  V  ++ TV+  + RD      + Y +S  N+ G  F+I +  G 
Sbjct: 3256 EFSQSHISATVPESQSVGSIVRTVSA-RDRDAAMNGLITYHISSGNENG-LFAINASTGT 3313

Query: 97   ISLMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
            ++L + LDYE    +  T+ ATD      T+  ++ I+V++VND  P F   +Y    P 
Sbjct: 3314 LTLAKPLDYELHQKHEMTISATDGGWRARTSYCSIIINVLDVNDNSPIFIPEEYS---PT 3370

Query: 154  IPLADLTPGSVIGKVEAADGDKGDR--VTLSLRGPYEKMFSIN-DSGHIS 200
            + L +   G+ + ++ A D D G    +  SL+     +F I+ +SG I+
Sbjct: 3371 V-LENAPSGTTVMRLNATDADSGSNAVIAYSLQSSDSDLFVIDPNSGVIT 3419



 Score = 41.6 bits (96), Expect = 0.71,   Method: Compositional matrix adjust.
 Identities = 38/137 (27%), Positives = 66/137 (48%), Gaps = 12/137 (8%)

Query: 89   FSISRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVND--WDPRFR 143
            FS+S  G ++  + +D E    +  +V   D+    M+++ TV+I V++ ND   +PR  
Sbjct: 3726 FSLSTAGVLTTTREIDREQIGDFYLSVITRDSGIPQMSSTGTVHIRVIDQNDNPSEPR-- 3783

Query: 144  YPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSGHISIVD 203
                E+F+ +   ++L PG ++G V+  D D  D    SL      +FSI  SG   +  
Sbjct: 3784 --TVEIFVHY--FSNLFPGGILGSVKPQDPDVLDSFHCSLTSGVTSLFSI-PSGTCDLNS 3838

Query: 204  LSALNTSTIQLVVVATD 220
             +     T  L V++ D
Sbjct: 3839 QARSTDGTFDLTVLSND 3855



 Score = 40.8 bits (94), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 56/215 (26%), Positives = 95/215 (44%), Gaps = 25/215 (11%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGERFSISRQGDISLMQ 101
           F  + Y     E+  V   +L V+    ++  +  ++Y L  D G        G I++ +
Sbjct: 418 FGSSHYQAGVPEDAAVGSSVLQVSAADADEGTNADIRYQLQEDGGPFHMDPETGLITVRE 477

Query: 102 CLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDP--RFRY-PQYELFLPHIP 155
            LDYE    Y  T+ A D     +T  A   I +++VND DP  +FRY P    F     
Sbjct: 478 PLDYEARRQYSLTLQAHDRGVPSLTGRAEALIQLLDVNDNDPVVKFRYFPATSRFASVDE 537

Query: 156 LADLTPGSVIGKVEAADGDK----GDRVTLSLRGPYEKMFSINDSG--HISIVDL-SALN 208
            A +  G+V+  +   D D     G+     L G  ++ F +  S   ++S++ + SAL+
Sbjct: 538 NAQV--GTVVALLTVTDADSPAANGNISVQILGGNEQRHFEVQRSKVPNLSLIKVASALD 595

Query: 209 TSTIQ----LVVVATDTGNPP---RQASVPAIMHF 236
              I      V V+ + G PP    ++SV +++ F
Sbjct: 596 RERIPSYNLTVSVSDNHGAPPGAVARSSVASLVIF 630



 Score = 39.7 bits (91), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 62/240 (25%), Positives = 101/240 (42%), Gaps = 25/240 (10%)

Query: 9    QPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVT 68
            Q   L V+A    +++R + AT+ +   GT+    +F    Y     E      V+  V 
Sbjct: 3430 QSYHLTVKAFNVPDEERCSFATVNIQLKGTNEYVPRFVSKLYYFEVSEAASKGTVVGEVF 3489

Query: 69   TNKPRDL----RVKYWL-SNDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDTLM 122
             +  RD+     V Y +      + F I SR G I +   LD E E+     V A ++  
Sbjct: 3490 ASD-RDMGVDGEVHYLIFGTSRKKGFQINSRTGQIYVSGFLDREKEERISLKVLAKNSGS 3548

Query: 123  TTSA-----TVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTP-GSVIGKVEAADGDK- 175
               A     TVNI++++ ND       P + L + ++ +++  P G+ +  V A D D  
Sbjct: 3549 IRGADVDEVTVNITILDANDP------PVFSLEIYNVQISEGVPIGTHVTFVSAFDSDSV 3602

Query: 176  --GDRVTLSL-RGPYEKMFSIN-DSGHISI-VDLSALNTSTIQLVVVATDTGNPPRQASV 230
                R +  +  G    +FSIN  +G I++  +L         L V+A D G PP   S 
Sbjct: 3603 PSWSRFSYFIGSGNENGVFSINPQTGQITVTAELDRETLPVYNLTVLAVDLGTPPATGSA 3662



 Score = 38.1 bits (87), Expect = 7.8,   Method: Compositional matrix adjust.
 Identities = 47/163 (28%), Positives = 76/163 (46%), Gaps = 15/163 (9%)

Query: 77   VKYWLSNDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISV 132
            V Y L  +    F+I  + G+ISL++ LD     SY+  + A+D     +++S  + +SV
Sbjct: 1094 VLYSLKQNPKNLFTIDEKNGNISLLRPLDVHA-GSYQVEILASDRGVPQLSSSFILTVSV 1152

Query: 133  VNVNDWDPRFRYPQYELFLPHIPLADLTP-GSVIGKVEAADGDKGDRVTLSL---RGPYE 188
             +VND  P F    YE     + L++  P  S+  KV+A+D D G    ++     G   
Sbjct: 1153 HDVNDNPPVFDQLSYE-----VTLSEAQPVNSLFFKVQASDQDSGANGEIAYSIAEGNTG 1207

Query: 189  KMFSINDSGHISI-VDLSALNTSTIQLVVVATDTGNPPRQASV 230
              F I   G + +  +L         L+VVA+D    P  A+V
Sbjct: 1208 NAFGIFPDGQLYVKSELDRELQDRYVLLVVASDRAVEPLSATV 1250


>gi|195156934|ref|XP_002019351.1| GL12362 [Drosophila persimilis]
 gi|194115942|gb|EDW37985.1| GL12362 [Drosophila persimilis]
          Length = 1779

 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 56/160 (35%), Positives = 84/160 (52%), Gaps = 16/160 (10%)

Query: 87   ERFSISR-QGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRF 142
            E FSI+   G I  +  LDYE     +F V  +DT    +T++A V + ++N+ND +P F
Sbjct: 851  EYFSINHTSGAIYSITRLDYEAVKEVKFLVTVSDTGVPALTSTADVVVDIINLNDNEPHF 910

Query: 143  RYPQYELFLPHIPLADLTP-GSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIND-SGH 198
                Y     +  + + +P G+V GKVEA DGD G    VT +L G  +K FSI+  +G+
Sbjct: 911  TQTDY-----YFNITENSPRGTVAGKVEAQDGDVGVFGEVTYTLIGENDKYFSIDAYTGN 965

Query: 199  ISIVDLSALNTSTIQ---LVVVATDTGNPPRQASVPAIMH 235
            + + + S L+   I+   L VVA D      Q S  A +H
Sbjct: 966  VMVANASILDREQIKELTLSVVAQDKAPATVQKSATATIH 1005



 Score = 46.2 bits (108), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 42/130 (32%), Positives = 64/130 (49%), Gaps = 15/130 (11%)

Query: 102 CLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLAD 158
           CLDYET+ +Y  +  ATD      T   ++ ISV + ND  P    P Y   +    L  
Sbjct: 434 CLDYETDTTYFLSYKATDDNGKGQTDRVSLRISVTDANDSPPVCESPLYRASVDEGALVF 493

Query: 159 LTPGSVIGKVEAADGDKGDRVTLSLRGP--YEKMFSIN-DSGHISI-----VDLSALNTS 210
            +P  +I  V+A D D    ++  +RGP   E +F I+ ++G ISI     +D++ L + 
Sbjct: 494 DSP--LI--VKARDADTMSSISYRIRGPEQVEGIFDIDKETGQISIRPNATLDVTNLKSD 549

Query: 211 TIQLVVVATD 220
            +  VV A D
Sbjct: 550 QLIFVVEAND 559



 Score = 42.7 bits (99), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 38/122 (31%), Positives = 58/122 (47%), Gaps = 19/122 (15%)

Query: 102 CLDYETEDSYRFTVYA----TDT--LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIP 155
            LDYE  +  +F V      TDT   ++++AT+ +SV++ ND  P F    Y   +    
Sbjct: 221 SLDYENPNQRKFIVLVIAEETDTSPKLSSTATITVSVLDANDNKPVFEQESYSASVSEAA 280

Query: 156 LADLTPGSVIGKVEAAD------GDKGDRVTLSLRGPYEKMFSIND-SGHISIVDLSALN 208
           L    PG  I  + A D      GD G R +LS  G   ++F +N+ +G IS+ +     
Sbjct: 281 L----PGQYIATITARDVDSGSYGDSGIRYSLSGTGA--ELFHVNEQTGVISLANCHDAT 334

Query: 209 TS 210
           TS
Sbjct: 335 TS 336



 Score = 39.7 bits (91), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 45/172 (26%), Positives = 70/172 (40%), Gaps = 27/172 (15%)

Query: 28   LATLIVSKAGTSLRELQFSKNEYSVSALEN----LPVNYVLLTVTTNKPRDLRVKYWLSN 83
            L T+ +  A  +  E   + N Y VS  EN    + + ++     +   RD+     L N
Sbjct: 1223 LLTVSIVDANENRPEFPDASNPYKVSINENSGRDVKIGHIQAASRSKHNRDIFYYMLLGN 1282

Query: 84   DYGERFSISRQGDISLMQCLDYETEDSYRFTVYAT-----------------DTLM--TT 124
            + G  +     GDI   + LD E  D+Y   + A+                  TL   +T
Sbjct: 1283 EDGAFYVDKITGDIFTNKSLDREETDAYTLYILASIKADLHISEEERASFSIKTLNRDST 1342

Query: 125  SATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG 176
             A V I+V++VND  P F  P Y   +     A+    + I +V A D D+G
Sbjct: 1343 VAKVAITVLDVNDNAPEFEKPIYYAGVN----ANAKMNAAITQVNATDADQG 1390



 Score = 38.5 bits (88), Expect = 6.0,   Method: Compositional matrix adjust.
 Identities = 38/137 (27%), Positives = 62/137 (45%), Gaps = 12/137 (8%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGERFSISRQGDISLMQ 101
           F +  YS    EN  +   +  VT    +  ++  ++Y +           R G+I +  
Sbjct: 582 FDQQSYSAVVEENSEIGTSVERVTASDLDTGKNAELRYRIQQALMTLGIDERTGEIFVSH 641

Query: 102 CLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL-A 157
            LDY+  ++Y   V A+D     +T +AT+ I+V N ND DP F  P  +    H  + A
Sbjct: 642 KLDYDRRNTYALQVQASDQGTPSLTGTATLTINVQNSNDKDPYF-VPATQ----HAEVRA 696

Query: 158 DLTPGSVIGKVEAADGD 174
           D  PG ++  + A D D
Sbjct: 697 DAPPGHLVYTLIALDPD 713


>gi|410917772|ref|XP_003972360.1| PREDICTED: protocadherin-23-like [Takifugu rubripes]
          Length = 3262

 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 59/179 (32%), Positives = 87/179 (48%), Gaps = 15/179 (8%)

Query: 56   ENLPVNYVLLTVTTNKPRDLR--VKYWLSNDYGER--FSISR-QGDISLMQCLDYETEDS 110
            EN P  + +  VT N   DL   + Y LS +   R  F+I +  G ++L Q LDYE +  
Sbjct: 2249 ENRPAGHTVTQVTAND-VDLSSTITYSLSAEGSTRSPFAIDQYTGVVTLTQALDYEEQAE 2307

Query: 111  YRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEA 170
            Y  TV A+D+L  TS  V + V++VND  P F    Y++ L  +  AD    +++  V A
Sbjct: 2308 YTLTVLASDSLHQTSGEVKVQVLDVNDNAPVFSKDSYQVDLSELAAAD----TLVLSVSA 2363

Query: 171  ADGDKGDRVTLSLR---GPYEKMFSINDSGHISIVD--LSALNTSTIQLVVVATDTGNP 224
             D D G    ++ R    P +  +   DSG + I        N + I L+V A D G+P
Sbjct: 2364 TDRDSGLNGEITYRLLSSPSQGFYIQADSGSVFINKPIKEITNGNLIHLLVEARDGGDP 2422



 Score = 51.2 bits (121), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 58/214 (27%), Positives = 89/214 (41%), Gaps = 37/214 (17%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDL---RVKYWLSNDYGE-RFSI-SRQGDISL 99
            FS+  Y  S  E LP    +L ++   P +     V Y L+ D     FS+ S  G I  
Sbjct: 1824 FSRKSYQASVSEGLPPGAEVLRLSAFDPDEGPNGHVTYSLTEDSSHGAFSVDSLTGAIRT 1883

Query: 100  MQCLDYETEDSYRFTVYATDTL----MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIP 155
             + LD E    Y     ATD      + + A V I V +VND               ++P
Sbjct: 1884 TRSLDREGRAQYTIRAVATDGCTRGPLHSVAPVTILVEDVND---------------NVP 1928

Query: 156  LADLTP-----------GSVIGKVEAADGDKGDRVTLSLRGPYEK-MFSIN-DSGHISIV 202
            + D  P             ++  V A DGD+G+  TL    P E+ +F+IN ++G IS+ 
Sbjct: 1929 VCDQNPINGWVSMRTLPNQIVATVTAEDGDQGENGTLLFALPDEENLFAINSETGEISLR 1988

Query: 203  DLSALNTSTIQLVVVATDTGNPPRQASVPAIMHF 236
                   S  +L V+ +D G P   ++   ++H 
Sbjct: 1989 RRVRAGFSGRKLEVMVSDRGRPVLTSACLVLIHL 2022



 Score = 47.8 bits (112), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 56/200 (28%), Positives = 81/200 (40%), Gaps = 27/200 (13%)

Query: 43   LQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLR---VKYWLSNDYGERFSISRQ-GDIS 98
            L F+ N Y+ +  EN      +  V      D R   V    S +    FSI+   G+I 
Sbjct: 2029 LHFTNNVYNATIQENSRAGTWITKVEATGRADSRQSVVYSIFSGNEHSLFSINHHTGEIR 2088

Query: 99   LMQ--CLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
            + +   LD+E        V A + L TT   V+IS+++VND  PRF Y  Y   +     
Sbjct: 2089 VQKDYALDFELSPHIHLVVLAENGLQTTHCRVSISLLDVNDNAPRFDYSSYRTAV----W 2144

Query: 157  ADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSGHISIVD----LSALN---- 208
                  + I +V A+D D G      + G  E      D     I+D    + A N    
Sbjct: 2145 EGQAHNTYIMQVFASDADGG------INGQIEYSIVSGDPNQAFILDSVRGILATNVLLD 2198

Query: 209  ---TSTIQLVVVATDTGNPP 225
               T + +LV+ A D G PP
Sbjct: 2199 REITPSYKLVLQAADKGEPP 2218



 Score = 47.8 bits (112), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 61/223 (27%), Positives = 93/223 (41%), Gaps = 27/223 (12%)

Query: 11   ITLVVRAIQYDNQDRYALATLIVS-KAGTSLRE----LQFSKNEYSVSALENLPVNYVLL 65
            ++L V   +   +D  A  TL+   + G   R+    +Q   +    S L    + Y L 
Sbjct: 956  LSLTVSVDRSAAEDSLAFETLVYQVEIGEGYRKDSRVIQVRAHWSRRSHLSTSGLTYSLE 1015

Query: 66   TVTTNKPRDLRVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDTLMTTS 125
            T   + P   R+               + G + L   LDYETE ++R  V A  +    +
Sbjct: 1016 TEAGSPPAPFRIH-------------PKSGWLYLSHNLDYETESTFRCRVLARASPANAT 1062

Query: 126  AT--VNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS- 182
            AT  + +SV++VND  P F    Y   +   P    +P  ++G V A D D G    LS 
Sbjct: 1063 ATAELTVSVLDVNDNAPVFSSEVYHFTVSEAP----SPQGLVGTVSAVDKDSGINAQLSY 1118

Query: 183  LRGPYEKMFSIN-DSGH-ISIVDLSALNTSTIQLVVVATDTGN 223
            +     K F IN  +G  I+ V L   + S   L V+ TD G+
Sbjct: 1119 ILLSDGKFFRINAKTGEIINWVALDREHHSQHTLKVMVTDQGH 1161



 Score = 47.8 bits (112), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 32/92 (34%), Positives = 44/92 (47%), Gaps = 6/92 (6%)

Query: 87   ERFSIS-RQGDISLMQCLDYETEDSYRFTVYATDT-LMTTSATVNISVVNVNDWDPRFRY 144
            E F+I    GDI   Q  DYE E+ Y F V A D    + +  V +S+  V+++ P F  
Sbjct: 2724 EAFAIDPLTGDIHTRQTFDYERENEYCFVVEAQDKGGKSATVRVQVSIKGVDEFSPVFTQ 2783

Query: 145  PQYELFLPHIPLADLTPGSVIGKVEAADGDKG 176
             QY   LP     +     V+G V A D D+G
Sbjct: 2784 KQYHFLLPENSKRE----DVVGFVTAMDHDRG 2811



 Score = 45.8 bits (107), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 52/177 (29%), Positives = 79/177 (44%), Gaps = 13/177 (7%)

Query: 13   LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENL-PVNYVLLTVTTNK 71
            L +RA  +      +  T  V     + R   FS+N Y+ S  EN  P   V+    T+ 
Sbjct: 1583 LTIRAADHGLPPLSSTQTFTVEVGDVNDRSPVFSQNIYNASVAENRDPGEPVVRVSATDD 1642

Query: 72   PRDLRVKYWLSNDYG---ERFSIS-RQGDISLMQCLDYETEDSYRFTVYATDTL---MTT 124
              +     W S   G   E FSI+   G I+    LD E +  +   V A D+    ++ 
Sbjct: 1643 DSEENAVVWYSLLPGPGYELFSINPHTGLITTASYLDREQQPHFSLRVQARDSGSRPLSA 1702

Query: 125  SATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTL 181
            +ATV  SV++ ND  PRF    + + LP     +L PG+ I   +A+D D G+  T+
Sbjct: 1703 TATVLCSVLDDNDNPPRFMQSSFRVSLPE----NLPPGA-IHTAQASDPDLGENGTI 1754



 Score = 44.3 bits (103), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 58/207 (28%), Positives = 93/207 (44%), Gaps = 27/207 (13%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRDL----RVKYWLS---NDYGERFSISR-QGD 96
           F++ EY  S  E+ P+   +  V      DL    R+ Y ++   +D  E FSI+R  G 
Sbjct: 236 FNQTEYHASVPEDAPLMSPVCQVHATD-LDLGDNGRITYEINRRQSDPNEVFSINRTSGV 294

Query: 97  ISLMQCLDYETEDSYRFTVYATDTLMT---TSATVNISVVNVNDWDPRFRYPQYELFLPH 153
           + L + LDYE +  +   V ATD       +SA V + V+N+ND  P        LFL  
Sbjct: 295 VYLNKPLDYEAQVFHELIVSATDNGAQPEYSSAFVGVKVLNINDHSPSISV----LFLSE 350

Query: 154 IPLADLTPGSVIG----KVEAADGD-KGDRVTLSLRGPYEKMFSINDSGHISI-----VD 203
              A ++  + IG    ++  +D D + + V ++L G   K F++  +           D
Sbjct: 351 TGEATVSEAAGIGDFVARISVSDPDFQEEMVAVTLEGGDGK-FTLKQTDDFLYALCVSAD 409

Query: 204 LSALNTSTIQLVVVATDTGNPPRQASV 230
           L        +L V A+D G+PP  + V
Sbjct: 410 LDREEKDLYELKVRASDLGSPPLSSEV 436



 Score = 43.1 bits (100), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 56/192 (29%), Positives = 90/192 (46%), Gaps = 15/192 (7%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSN-DYGERFSIS-RQGDISLMQC 102
           F ++ Y+ +  E+ P    + TV    P    V Y +S+ D    FSI  + G IS ++ 
Sbjct: 770 FQRSRYTFTVPEDAPPGTSVGTVEAMTPA---VSYRISSGDPKGFFSIHPKSGLISSIKP 826

Query: 103 LDYETEDSYRFTVYA-TDTLMTTSAT-VNISVVNVNDWDPRFRYPQYELFLPHIPLADLT 160
           LD+E + +    + + TDT    S T VNI++ ++ND  P F   +  + +    L    
Sbjct: 827 LDHELQPNVLLVLQSYTDTSPVYSTTQVNIAITDINDNAPVFLRTRDAISVSQNTL---- 882

Query: 161 PGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIN-DSGHISI-VDLSALNTSTIQLVV 216
           PG+V+    A D D G   RV   LR     MF I+ D G +++   L   +  +  L +
Sbjct: 883 PGTVLFIAHAHDDDSGANGRVRYHLRNNRYGMFGIDRDLGAVTLNQSLLVSSQQSYNLEI 942

Query: 217 VATDTGNPPRQA 228
           VA D G P + +
Sbjct: 943 VAEDGGEPAQSS 954



 Score = 41.2 bits (95), Expect = 0.95,   Method: Compositional matrix adjust.
 Identities = 48/163 (29%), Positives = 79/163 (48%), Gaps = 17/163 (10%)

Query: 76   RVKYWLSNDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATD---TLMTTSATVNIS 131
            ++ Y L +D G+ F I ++ G+I     LD E    +   V  TD     +  +ATV+I 
Sbjct: 1115 QLSYILLSD-GKFFRINAKTGEIINWVALDREHHSQHTLKVMVTDQGHARLNATATVHIL 1173

Query: 132  VVNVNDWDPRFRY-PQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR------ 184
            V + ND  P+F + P  +     I  A++  GS++  + A D D G+  T++L       
Sbjct: 1174 VTDTNDNPPQFTHLPASKEVNVQI-WAEVPAGSLVTNMFAKDSDAGENGTVALSLVPEEA 1232

Query: 185  GPYEKMFSIN-DSGHISIVDLSALNTSTI-QLVVVATDTGNPP 225
            GP    F I+ ++G IS  +  + N+ +   L + A D G PP
Sbjct: 1233 GP--SHFVIDGETGDISTTEHFSQNSRSFYTLRICARDGGAPP 1273



 Score = 38.5 bits (88), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 46/177 (25%), Positives = 75/177 (42%), Gaps = 30/177 (16%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTN----KPRDLRVKYWLSNDYGE-RFSISRQ----- 94
            F +  YS++  E+ P +  LLT++       P +  + Y +     E RFS+  +     
Sbjct: 2444 FHQEVYSLTVPEDTPTDATLLTLSAEDRDWSPENTHLDYAIIQGNEERRFSLEVRLVQVE 2503

Query: 95   ------GDISLMQCLDYETEDSYRFTVYATDTL---MTTSATVNISVVNVNDWDPRFRYP 145
                  G + L   LD ET +SY  TV   D     + +SA V ++V + ND  P F   
Sbjct: 2504 NQWRNVGKLVLCNPLDRETTESYVLTVSVADRGIPPLNSSAVVMVTVADCNDNAPVFSST 2563

Query: 146  QYELFLPHIPLADLTP-GSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSGHISI 201
            +Y     H  + + +  G+ + +V A D D G   +L        + S N  GH  +
Sbjct: 2564 EY-----HTQVRENSAVGTHLVQVTAQDPDLGPNGSLKF-----DIISGNGKGHYKL 2610



 Score = 38.5 bits (88), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 42/145 (28%), Positives = 66/145 (45%), Gaps = 12/145 (8%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWL--SNDYGERFSISRQGDISL 99
           F K+ Y+VS  E+ P    L+ + T   ++  +  V+Y +  SN  G        G I+ 
Sbjct: 452 FEKDAYAVSVPEDAPQGSSLIRMQTRDADEGANAAVRYSILRSNQDGLVSIEPESGLITT 511

Query: 100 MQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
              LD E  +   F V A D     ++++ATV + V++VND +P F+   Y   +P    
Sbjct: 512 AAPLDREALEQLWFLVVAADGGEPSLSSTATVTVLVLDVNDNEPVFQQQLYNATVPEHSG 571

Query: 157 ADLTPGSVIGKVEAADGDKGDRVTL 181
                GS   +V A D D  +  TL
Sbjct: 572 V----GSCFLQVVATDADSREFGTL 592


>gi|301623207|ref|XP_002940911.1| PREDICTED: protocadherin Fat 1-like isoform 1 [Xenopus (Silurana)
            tropicalis]
          Length = 4590

 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 56/217 (25%), Positives = 101/217 (46%), Gaps = 20/217 (9%)

Query: 33   VSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWL---SNDYGERF 89
            ++K   S   + F +  +S S +E+ PV +++  +TT     L    W      +Y  RF
Sbjct: 1347 IAKPAPSAEPITFEEPSFSFSVMESDPVAHMIGVITTEP---LGSPLWFDITGGNYDSRF 1403

Query: 90   SISR-QGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYE 148
             + +  G I + + LD E + +Y  TV ATD   + S  V+I V++ ND  P F   +YE
Sbjct: 1404 DVDKGTGTIIVARPLDAEQKSNYNLTVEATDGTRSVSTQVSIKVIDTNDHRPEFSTSKYE 1463

Query: 149  LFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYE----KMFSINDSGHISIVDL 204
            + +P     D+ P + I +V A D D+ +++  +L+   +    K F + D    S+   
Sbjct: 1464 VLIPE----DVQPDTEILQVIAIDRDEKNKLIYTLQSSTDPVSLKKFRM-DPATGSLYTT 1518

Query: 205  SALNTSTIQLVVVATDTGNPPRQASVPAIMHFPEAIV 241
              L+  T+Q  ++        R   VP + +F   ++
Sbjct: 1519 EKLDHETMQQHILTVMV----RDQDVPVLRNFARIVI 1551



 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 63/233 (27%), Positives = 106/233 (45%), Gaps = 20/233 (8%)

Query: 29   ATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYV---LLTVTTNKPRDLRVKYWLSNDY 85
            A + V+    +L   +F +NEY V   EN PV  +   L  V  +K    ++ Y + ND+
Sbjct: 2477 AQVHVTVKSANLHSPKFGQNEYEVELSENSPVQTLVTELKAVDEDKGLYGQLTYHIINDF 2536

Query: 86   G-ERFSISRQGDISLMQCLDYE--TEDSYRFTVYATDTLMTTS-ATVNISVVNVNDWDPR 141
              + F+I+ +G +   +  D E  T      +V A DT        VN+ + + ND  P+
Sbjct: 2537 AKDNFNINERGQLFTAERFDREIPTNKVIPVSVMAKDTGGKVGFCIVNVILTDSNDNVPQ 2596

Query: 142  FRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTL-----SLRGPYEKMFSINDS 196
            FR  +Y++ +     +D+  G+ I KV A+D D+G    +     +     E+ F I+ S
Sbjct: 2597 FRATEYKVSI----ASDVPRGTPIVKVIASDSDEGANADIFYSIEAQSASVEENFGISQS 2652

Query: 197  GH--ISIVDLSALNTSTIQLVVVATDTGNPPRQASVPAIMHF--PEAIVQQAS 245
                I+   L  L        V ATD G P +++ VP  +    PE ++ + S
Sbjct: 2653 SGTIITKESLIGLEDEVYSFFVKATDGGTPQKESLVPVFIRILPPEVVLPKFS 2705



 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 63/216 (29%), Positives = 96/216 (44%), Gaps = 31/216 (14%)

Query: 50   YSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSN-DYGERFSIS-RQGDISLMQCLDYET 107
            YS    EN  ++  ++ V  N P   R+ Y +++ D   +F+I+   G I++   LD+E+
Sbjct: 2188 YSAEIAENANLHSPVVHVQANSPEGYRIIYSITDGDPFNQFNINFNTGVINVFAPLDFES 2247

Query: 108  EDSYRFTVYATDTLMTTSATVNISVV--NVNDWDPRFRYPQYELFLPHIPLADLTPGSVI 165
              +Y+  V ATD+L    A V + ++  +VND  P FR   Y         A L+  SVI
Sbjct: 2248 HPAYKLRVRATDSLTGAHAEVFVDIILEDVNDNPPVFREKTY--------AATLSEASVI 2299

Query: 166  G----KVEAADGDKGDRVTLSLR-----GPYEKMFSINDSGHISIVDLSALNTSTIQ--- 213
            G    ++ A D D G    +S       G   + F I+ S  + I     L+    Q   
Sbjct: 2300 GTSVVQINAKDPDSGQNNAISFHLVETSGNISQYFHIDASSGL-IETAKPLDYEYFQECT 2358

Query: 214  LVVVATDTGNPPRQASVPAIMHF------PEAIVQQ 243
            LVV ATD G PP    +   +        P A +QQ
Sbjct: 2359 LVVRATDNGIPPLSNDISVHIGLTDLNDNPPAFIQQ 2394



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 76/261 (29%), Positives = 111/261 (42%), Gaps = 30/261 (11%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRV------KYWLSNDYGERFSISR-QGDI 97
            F   EY  S  E+ PV   +L V     RD+ V      K    N++G +F+I+   G I
Sbjct: 3231 FEHREYGSSLTEDAPVGTEVLQVYATS-RDIEVNAEITYKIISGNEHG-KFTINPVTGMI 3288

Query: 98   SLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHI 154
             ++  LDYET   Y  TV ATD     ++  A+VNI+V +VND  P F    Y   +   
Sbjct: 3289 FIIASLDYETSPEYYLTVEATDGGTPPLSDVASVNINVTDVNDNSPVFSQNTYTTVVGE- 3347

Query: 155  PLADLTPGSVIGKVEA--ADGDKGDRVTLSL-RGPYEKMFSIND-SGHISIVDLSALN-T 209
               D   G  +  V A  ADG   + +  S+  G     F I+   G + +  L      
Sbjct: 3348 ---DSVSGQSVLMVVADDADGPLNNHIRYSITEGNPGNTFIIDPVRGEVKVNKLLDRELI 3404

Query: 210  STIQLVVVATDTGNPPRQASVPAIMHFPEAIVQQASSKLNSGTSSTVLIILGVVLIVLGF 269
            S   L + A D G PPR+ +    +   +  V       + G  S V+     V    GF
Sbjct: 3405 SGYTLTIQAEDNGQPPRRNTTTVNIDVSD--VNDNPPMFSKGNYSIVIQENKPV----GF 3458

Query: 270  VIILLILYIHKNKHTKNNGPP 290
             I+ L +    +K + +NGPP
Sbjct: 3459 SILHLAV---TDKDSSHNGPP 3476



 Score = 42.7 bits (99), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 66/233 (28%), Positives = 107/233 (45%), Gaps = 19/233 (8%)

Query: 6    DFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLL 65
            + L+   L+V+A   D   R+  A + ++    +    +FS + Y+V+  EN      LL
Sbjct: 3089 EILEVYHLMVKAT--DGGGRFCQAAVELTLEDVNDNAPEFSADPYTVTVYENTEPQTPLL 3146

Query: 66   TVTT---NKPRDLRVKYWLSNDYGERFSISR-QGDISLMQCLDYETEDSYRFTVYATDT- 120
             V     +   + +V+Y L +    +FSI    G ISL + LD E +  Y  TV ATD  
Sbjct: 3147 RVQAIDADLGLNHKVQYSLVSSAEGQFSIDELSGIISLEKPLDRELQAVYTLTVKATDQG 3206

Query: 121  ---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGD 177
                +++ A+V +SV+++ND  P F + +Y   L      D   G+ + +V A   D   
Sbjct: 3207 LPRKLSSVASVVVSVLDINDNPPVFEHREYGSSL----TEDAPVGTEVLQVYATSRDIEV 3262

Query: 178  RVTLSLR---GPYEKMFSIND-SGHISIV-DLSALNTSTIQLVVVATDTGNPP 225
               ++ +   G     F+IN  +G I I+  L    +    L V ATD G PP
Sbjct: 3263 NAEITYKIISGNEHGKFTINPVTGMIFIIASLDYETSPEYYLTVEATDGGTPP 3315



 Score = 42.4 bits (98), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 42/163 (25%), Positives = 72/163 (44%), Gaps = 16/163 (9%)

Query: 45   FSKNEYSVSALENLPVNYVLLTV-------TTNKPRDLRVKYWLSNDYGERFSISRQGDI 97
            FSK  YS+   EN PV + +L +       + N P    V  +LS +    F +  QG I
Sbjct: 3441 FSKGNYSIVIQENKPVGFSILHLAVTDKDSSHNGPPFTFV--FLSGNEDNTFQMDEQGLI 3498

Query: 98   SLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHI 154
            +    L  + +D +   +  +D     +++   + + V+  +   P       E+++   
Sbjct: 3499 TTAGTLSRKIKDLFVLHIQVSDNGKPQLSSFTNIEVRVIEESIHPPAIL--PLEIYI--T 3554

Query: 155  PLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSG 197
               +   G VIGKV A D D  D +T SL    E +FS++ +G
Sbjct: 3555 TFGEEYSGGVIGKVHATDQDVYDTLTYSLDPKMENLFSVSKTG 3597



 Score = 41.6 bits (96), Expect = 0.74,   Method: Compositional matrix adjust.
 Identities = 40/145 (27%), Positives = 64/145 (44%), Gaps = 8/145 (5%)

Query: 90   SISRQGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYEL 149
            ++  +  + + + LD E +D+Y   + ATD    T A V + V++ ND  P      Y  
Sbjct: 2972 NMQHEWKVYVRKPLDREVKDNYLLNITATDGTFATKAVVEVKVLDANDNTPVCEKTSYAE 3031

Query: 150  FLPHIPLADLTPGSVIGKVEAADGD--KGDRVTLSLRGPYEKMFSIND-SGHISI-VDLS 205
             +    LA    G VI +V A+D D      +  +L G   + F +N  +G +   + L 
Sbjct: 3032 TISEDALA----GRVILQVAASDADIRSNAEIIYTLHGVGAEKFHLNPFTGELKTSLPLD 3087

Query: 206  ALNTSTIQLVVVATDTGNPPRQASV 230
                    L+V ATD G    QA+V
Sbjct: 3088 REILEVYHLMVKATDGGGRFCQAAV 3112



 Score = 41.2 bits (95), Expect = 0.88,   Method: Compositional matrix adjust.
 Identities = 58/204 (28%), Positives = 90/204 (44%), Gaps = 28/204 (13%)

Query: 43   LQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVK-----YWLSNDYGERFSIS-RQGD 96
            L+F++  YS + LEN      + T+T   P   R+      + L+ D   RF IS   G 
Sbjct: 1978 LKFTQRSYSATVLENATK---VKTLTIISPLGSRINEPLFFHILNPD--PRFKISPTSGV 2032

Query: 97   ISLMQC-LDYETEDSYRFTVYATDTLMTTSAT---VNISVVNVNDWDPRFRYPQYELFLP 152
            +S      D E ED +   V  +D     +     V ++V +VND +P F      + LP
Sbjct: 2033 LSTTGIPFDREEEDLFELVVEVSDEQKPPTVAHVLVQVTVEDVNDNNPVF------VNLP 2086

Query: 153  HIPLA--DLTPGSVIGKVEAADGD--KGDRVTLSLRGPYEKMFSINDSGHISIVDLSALN 208
            +  +   D   G +I  V A D D  K   +T  L+  + + F I  SG I +      +
Sbjct: 2087 YYAMVQIDAPEGHLIRHVTAVDRDIGKNGEITYYLK-EHSQQFQIGPSGEIKLKKQFDPD 2145

Query: 209  TSTIQ--LVVVATDTGNPPRQASV 230
            +S  +  + VVA D+GNP   + V
Sbjct: 2146 SSNKEYFITVVAKDSGNPSYSSEV 2169



 Score = 40.8 bits (94), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 53/190 (27%), Positives = 88/190 (46%), Gaps = 18/190 (9%)

Query: 53   SALENLPVNYVLLTVTTNKP---RDLRVKYWLSNDYG-ERFSISRQ-GDISLMQCLDYET 107
            S  E++P+   ++TV+ +     RD  ++Y + +  G   F+I  + G I     LD ET
Sbjct: 1043 SIREDVPIGTPVMTVSAHDEDTGRDGEIRYSIRDGSGVGVFTIHEEKGTIRTADNLDRET 1102

Query: 108  EDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSV 164
               Y  TVYATD     +++   + I + +VND  P+   P   ++ P +        SV
Sbjct: 1103 TSHYWLTVYATDRGVVPLSSFIQIYIEIEDVNDNAPQTVEP---VYYPEVMENSAKDVSV 1159

Query: 165  IGKVEAADGD--KGDRVTLSLR-GPYEKMFSIN-DSGHISIVD--LSALNTSTIQLVVVA 218
            + ++ A D D    D++T  +  G  +  F+IN  +G I+     L     S   L V  
Sbjct: 1160 V-QINAFDPDSISSDKLTYKISTGNPQGFFAINPKTGLITTTSRKLDREQQSEHILEVTI 1218

Query: 219  TDTGNPPRQA 228
            TD G+P + A
Sbjct: 1219 TDNGHPAKSA 1228



 Score = 40.8 bits (94), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 55/215 (25%), Positives = 96/215 (44%), Gaps = 19/215 (8%)

Query: 24  DRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYW 80
           D+ A   +++   GT++   +F++  Y     EN P+   + +V     ++  +  + Y 
Sbjct: 443 DKKAFTKVLIKVLGTNINTPEFTQTSYKAVVDENSPIGSSVFSVHAVDHDEGENGFITYS 502

Query: 81  LSNDYGERFSI-SRQGDISLMQCLDYETEDS-YRFTVYATDTLM----TTSATVNISVVN 134
           ++N   + F+I +  G I+ ++ LDYE     Y   + A+D  +     T   V I++ N
Sbjct: 503 IANINPQPFAIDAFSGVITTLEDLDYELMPRIYTLKIRASDWGLPYRRETEIPVTITLNN 562

Query: 135 VNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYE-KMFSI 193
           +ND  P F     E  +P     DL  G  I  V A D D+   V   +    E  +F++
Sbjct: 563 LNDNIPLFEKVNCEGTVP----KDLGVGEQITTVSAIDADELQLVKYRIESGDELDLFTL 618

Query: 194 N-DSGHIS----IVDLSALNTSTIQLVVVATDTGN 223
           N +SG +S    + +  A   S   L + ATD  N
Sbjct: 619 NPNSGVLSLKQPLSEGPANKVSFYSLRITATDGEN 653


>gi|51345953|gb|AAU01512.1| protocadherin 7a [Rattus norvegicus]
 gi|149047191|gb|EDL99860.1| protocadherin 7, isoform CRA_c [Rattus norvegicus]
          Length = 1069

 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 62/203 (30%), Positives = 92/203 (45%), Gaps = 21/203 (10%)

Query: 37  GTSLRELQFSKNEYSVSALENLPVNYV--LLTVTTNKPRDLRVKYWLSNDYGERFSIS-R 93
           G S+ E+ F +N        N+P   V  +L    +  ++  + Y L +     F+I   
Sbjct: 536 GQSVVEVYFPEN--------NIPGERVATVLATDADSGKNAEIAYSLDSSVMGTFAIDPD 587

Query: 94  QGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELF 150
            GDI +   LD E  D Y F V A D    ++  S TV + V + ND DP+F    +  +
Sbjct: 588 SGDILVNTVLDREQTDRYEFKVNAKDKGIPVLQGSTTVIVQVADKNDNDPKFMQDVFTFY 647

Query: 151 LPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSI-NDSGHI-SIVDLSAL 207
           +      +L P S +G V   D DKG    +SL       +FSI ND+G I S +     
Sbjct: 648 VKE----NLQPNSPVGMVTVMDADKGRNAEMSLYIEENSNIFSIENDTGTIYSTMSFDRE 703

Query: 208 NTSTIQLVVVATDTGNPPRQASV 230
           + +T    V A D G+PPR A+ 
Sbjct: 704 HQTTYTFRVKAVDGGDPPRSATA 726



 Score = 40.8 bits (94), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 40/160 (25%), Positives = 71/160 (44%), Gaps = 26/160 (16%)

Query: 93  RQGDISLMQCLDYETEDSYRFTVY---ATDTLMTTSATVNISVVNVNDWDPRFRYPQYEL 149
           +Q  + +   LD E  DSY  T+      D   ++ A + + + +VND  PRF    YE 
Sbjct: 256 KQPQLIVKGALDREQRDSYELTLRVRDGGDPPRSSQAILRVLITDVNDNSPRFEKSVYEA 315

Query: 150 FLPHIPLADLTPGSVIGKVEAADGDKG---------DRVTLSLRGPYEKMFSIND-SGHI 199
            L      +  PG+ I ++ A D D G            T S+R    ++  +++ SG +
Sbjct: 316 DLAE----NSAPGTPILQLRATDLDVGVNGQIEYVFGAATESVR----RLLRLDETSGWL 367

Query: 200 SI---VDLSALNTSTIQLVVVATDTGNPPRQASVPAIMHF 236
           S+   +D   +N   ++  V+A D G PP+      +++ 
Sbjct: 368 SVLHRIDREEVN--QLRFTVMARDRGQPPKTDKATVVLNI 405


>gi|198454596|ref|XP_002137915.1| GA27485 [Drosophila pseudoobscura pseudoobscura]
 gi|198132867|gb|EDY68473.1| GA27485 [Drosophila pseudoobscura pseudoobscura]
          Length = 1984

 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 56/160 (35%), Positives = 84/160 (52%), Gaps = 16/160 (10%)

Query: 87   ERFSISR-QGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRF 142
            E FSI+   G I  +  LDYE     +F V  +DT    +T++A V + ++N+ND +P F
Sbjct: 1056 EYFSINHTSGAIYSITRLDYEAVKEVKFLVTVSDTGVPALTSTADVVVDIINLNDNEPHF 1115

Query: 143  RYPQYELFLPHIPLADLTP-GSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIND-SGH 198
                Y     +  + + +P G+V GKVEA DGD G    VT +L G  +K FSI+  +G+
Sbjct: 1116 TQTDY-----YFNITENSPRGTVAGKVEAQDGDVGVFGEVTYTLIGENDKYFSIDAYTGN 1170

Query: 199  ISIVDLSALNTSTIQ---LVVVATDTGNPPRQASVPAIMH 235
            + + + S L+   I+   L VVA D      Q S  A +H
Sbjct: 1171 VMVANASILDREQIKELTLSVVAQDKAPATVQKSATATIH 1210



 Score = 43.1 bits (100), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 41/130 (31%), Positives = 63/130 (48%), Gaps = 15/130 (11%)

Query: 102 CLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLAD 158
           CLDYET+ +Y  +  ATD      T   ++ ISV + ND  P    P Y   +    L  
Sbjct: 638 CLDYETDTTYFLSYKATDDNGKGQTDRVSLRISVTDANDSPPVCESPLYRASVDEGALVF 697

Query: 159 LTPGSVIGKVEAADGDKGDRVTLSLRG--PYEKMFSIN-DSGHISI-----VDLSALNTS 210
            +P  +I  V+A D D    ++  +RG    E +F I+ ++G ISI     +D++ L + 
Sbjct: 698 DSP--LI--VKARDADTMSSISYRIRGTEQVEGIFDIDKETGQISIRPNATLDVTNLKSD 753

Query: 211 TIQLVVVATD 220
            +  VV A D
Sbjct: 754 QLIFVVEAND 763



 Score = 43.1 bits (100), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 40/138 (28%), Positives = 65/138 (47%), Gaps = 13/138 (9%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGERFSI-SRQGDISLM 100
           F +  YS    EN  +   +  VT    +  ++  ++Y +     + F I  R G+I + 
Sbjct: 786 FDQQSYSAVVEENSEIGTSVERVTASDLDTGKNAELRYRIQQGSFDDFGIDERTGEIFVS 845

Query: 101 QCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL- 156
             LDY+  ++Y   V A+D     +T +AT+ I+V N ND DP F  P  +    H  + 
Sbjct: 846 HKLDYDRRNTYALQVQASDQGTPSLTGTATLTINVQNSNDKDPYF-VPATQ----HAEVR 900

Query: 157 ADLTPGSVIGKVEAADGD 174
           AD  PG ++  + A D D
Sbjct: 901 ADAPPGHLVYTLIALDPD 918



 Score = 42.7 bits (99), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 38/122 (31%), Positives = 58/122 (47%), Gaps = 19/122 (15%)

Query: 102 CLDYETEDSYRFTVYA----TDT--LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIP 155
            LDYE  +  +F V      TDT   ++++AT+ +SV++ ND  P F    Y   +    
Sbjct: 426 SLDYENPNQRKFIVLVIAEETDTSPKLSSTATITVSVLDANDNKPVFEQESYSASVSEAA 485

Query: 156 LADLTPGSVIGKVEAAD------GDKGDRVTLSLRGPYEKMFSIND-SGHISIVDLSALN 208
           L    PG  I  + A D      GD G R +LS  G   ++F +N+ +G IS+ +     
Sbjct: 486 L----PGQYIATITARDVDSGSYGDSGIRYSLS--GTGAELFHVNEQTGVISLANCHDAT 539

Query: 209 TS 210
           TS
Sbjct: 540 TS 541



 Score = 39.7 bits (91), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 45/172 (26%), Positives = 70/172 (40%), Gaps = 27/172 (15%)

Query: 28   LATLIVSKAGTSLRELQFSKNEYSVSALEN----LPVNYVLLTVTTNKPRDLRVKYWLSN 83
            L T+ +  A  +  E   + N Y VS  EN    + + ++     +   RD+     L N
Sbjct: 1428 LLTVSIVDANENRPEFPDASNPYKVSINENSGRDVKIGHIQAASRSKHNRDIFYYMLLGN 1487

Query: 84   DYGERFSISRQGDISLMQCLDYETEDSYRFTVYAT-----------------DTLM--TT 124
            + G  +     GDI   + LD E  D+Y   + A+                  TL   +T
Sbjct: 1488 EDGAFYVDKITGDIFTNKSLDREETDAYTLYILASIKADLHISEEERASFSIKTLNRDST 1547

Query: 125  SATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG 176
             A V I+V++VND  P F  P Y   +     A+    + I +V A D D+G
Sbjct: 1548 VAKVAITVLDVNDNAPEFEKPIYYAGVN----ANAKMNAAITQVNATDADQG 1595



 Score = 38.5 bits (88), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 37/123 (30%), Positives = 57/123 (46%), Gaps = 14/123 (11%)

Query: 109 DSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKV 168
           D   F V A D L + +  VNI+V +VN+  P F    Y   +      +   G+ + +V
Sbjct: 753 DQLIFVVEANDGLFSANCGVNITVRDVNNHAPAFDQQSYSAVVEE----NSEIGTSVERV 808

Query: 169 EAADGDKGDRVTLSLR---GPYEKMFSIND-SGHISI---VDLSALNTSTIQLVVVATDT 221
            A+D D G    L  R   G ++  F I++ +G I +   +D    NT  +Q  V A+D 
Sbjct: 809 TASDLDTGKNAELRYRIQQGSFDD-FGIDERTGEIFVSHKLDYDRRNTYALQ--VQASDQ 865

Query: 222 GNP 224
           G P
Sbjct: 866 GTP 868


>gi|74213455|dbj|BAE35541.1| unnamed protein product [Mus musculus]
          Length = 1069

 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 62/203 (30%), Positives = 92/203 (45%), Gaps = 21/203 (10%)

Query: 37  GTSLRELQFSKNEYSVSALENLPVNYV--LLTVTTNKPRDLRVKYWLSNDYGERFSIS-R 93
           G S+ E+ F +N        N+P   V  +L    +  ++  + Y L +     F+I   
Sbjct: 536 GQSVVEVYFPEN--------NIPGERVATVLATDADSGKNAEIAYSLDSSVMGTFAIDPD 587

Query: 94  QGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELF 150
            GDI +   LD E  D Y F V A D    ++  S TV + V + ND DP+F    +  +
Sbjct: 588 SGDILVNTVLDREQTDRYEFKVNAKDKGIPVLQGSTTVIVQVADKNDNDPKFMQDVFTFY 647

Query: 151 LPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSI-NDSGHI-SIVDLSAL 207
           +      +L P S +G V   D DKG    +SL       +FSI ND+G I S +     
Sbjct: 648 VKE----NLQPNSPVGMVTVMDADKGRNAEMSLYIEENSNIFSIENDTGTIYSTMSFDRE 703

Query: 208 NTSTIQLVVVATDTGNPPRQASV 230
           + +T    V A D G+PPR A+ 
Sbjct: 704 HQTTYTFRVKAVDGGDPPRSATA 726



 Score = 45.1 bits (105), Expect = 0.052,   Method: Compositional matrix adjust.
 Identities = 78/316 (24%), Positives = 133/316 (42%), Gaps = 46/316 (14%)

Query: 30  TLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVT---TNKPRDLRVKYWLSNDYG 86
           T+IV  A  +  + +F ++ ++    ENL  N  +  VT    +K R+  +  ++  +  
Sbjct: 624 TVIVQVADKNDNDPKFMQDVFTFYVKENLQPNSPVGMVTVMDADKGRNAEMSLYIEEN-S 682

Query: 87  ERFSISRQ-GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRF 142
             FSI    G I      D E + +Y F V A D      + +ATV++ V++ ND  P  
Sbjct: 683 NIFSIENDTGTIYSTMSFDREHQTTYTFRVKAVDGGDPPRSATATVSLFVMDENDNAPTV 742

Query: 143 RYPQ---YELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIND- 195
             P+   Y L  P   +      +V+  V A D D G    L+   + G   K+F I+  
Sbjct: 743 TLPRNISYTLLPPSSNVR-----TVVATVLATDSDDGINADLNYSIVGGNPFKLFEIDST 797

Query: 196 SGHISIV-DLSALNTSTIQLVVVATDTGNPPRQA----------SVPAIMHFPEAIVQQA 244
           SG +S+V  L+  +    +LVV   D+G P +            SV         IV+  
Sbjct: 798 SGVVSLVGKLTQKHYGLHRLVVQVNDSGQPSQSTTTLVHVFVNESVSNATVIDSQIVRSL 857

Query: 245 SSKLNSG---------TSSTVLIILGVVLIVLGFVIILLILYIHKNKHTKN-NGPPGSSH 294
            + L            +   + I++GVV  ++  ++I+LI+ + +   +KN NG      
Sbjct: 858 HTPLTQDIAGDPSYEISKQRLSIVIGVVAGIMTVILIILIVMMARYCRSKNKNGYEAGKK 917

Query: 295 SKNDSFLSNVILPEKH 310
              D F      P++H
Sbjct: 918 DHEDFF-----TPQQH 928



 Score = 40.8 bits (94), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 40/160 (25%), Positives = 71/160 (44%), Gaps = 26/160 (16%)

Query: 93  RQGDISLMQCLDYETEDSYRFTVY---ATDTLMTTSATVNISVVNVNDWDPRFRYPQYEL 149
           +Q  + +   LD E  DSY  T+      D   ++ A + + + +VND  PRF    YE 
Sbjct: 256 KQPQLIVKGALDREQRDSYELTLRVRDGGDPPRSSQAILRVLITDVNDNSPRFEKSVYEA 315

Query: 150 FLPHIPLADLTPGSVIGKVEAADGDKG---------DRVTLSLRGPYEKMFSIND-SGHI 199
            L      +  PG+ I ++ A D D G            T S+R    ++  +++ SG +
Sbjct: 316 DLAE----NSAPGTPILQLRATDLDVGVNGQIEYVFGAATESVR----RLLRLDETSGWL 367

Query: 200 SI---VDLSALNTSTIQLVVVATDTGNPPRQASVPAIMHF 236
           S+   +D   +N   ++  V+A D G PP+      +++ 
Sbjct: 368 SVLHRIDREEVN--QLRFTVMARDRGQPPKTDKATVVLNI 405


>gi|149047189|gb|EDL99858.1| protocadherin 7, isoform CRA_a [Rattus norvegicus]
          Length = 1159

 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 62/203 (30%), Positives = 92/203 (45%), Gaps = 21/203 (10%)

Query: 37  GTSLRELQFSKNEYSVSALENLPVNYV--LLTVTTNKPRDLRVKYWLSNDYGERFSIS-R 93
           G S+ E+ F +N        N+P   V  +L    +  ++  + Y L +     F+I   
Sbjct: 536 GQSVVEVYFPEN--------NIPGERVATVLATDADSGKNAEIAYSLDSSVMGTFAIDPD 587

Query: 94  QGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELF 150
            GDI +   LD E  D Y F V A D    ++  S TV + V + ND DP+F    +  +
Sbjct: 588 SGDILVNTVLDREQTDRYEFKVNAKDKGIPVLQGSTTVIVQVADKNDNDPKFMQDVFTFY 647

Query: 151 LPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSI-NDSGHI-SIVDLSAL 207
           +      +L P S +G V   D DKG    +SL       +FSI ND+G I S +     
Sbjct: 648 VKE----NLQPNSPVGMVTVMDADKGRNAEMSLYIEENSNIFSIENDTGTIYSTMSFDRE 703

Query: 208 NTSTIQLVVVATDTGNPPRQASV 230
           + +T    V A D G+PPR A+ 
Sbjct: 704 HQTTYTFRVKAVDGGDPPRSATA 726



 Score = 41.2 bits (95), Expect = 0.97,   Method: Compositional matrix adjust.
 Identities = 40/150 (26%), Positives = 68/150 (45%), Gaps = 26/150 (17%)

Query: 93  RQGDISLMQCLDYETEDSYRFTVY---ATDTLMTTSATVNISVVNVNDWDPRFRYPQYEL 149
           +Q  + +   LD E  DSY  T+      D   ++ A + + + +VND  PRF    YE 
Sbjct: 256 KQPQLIVKGALDREQRDSYELTLRVRDGGDPPRSSQAILRVLITDVNDNSPRFEKSVYEA 315

Query: 150 FLPHIPLADLTPGSVIGKVEAADGDKG---------DRVTLSLRGPYEKMFSIND-SGHI 199
            L      +  PG+ I ++ A D D G            T S+R    ++  +++ SG +
Sbjct: 316 DLAE----NSAPGTPILQLRATDLDVGVNGQIEYVFGAATESVR----RLLRLDETSGWL 367

Query: 200 SI---VDLSALNTSTIQLVVVATDTGNPPR 226
           S+   +D   +N   ++  V+A D G PP+
Sbjct: 368 SVLHRIDREEVN--QLRFTVMARDRGQPPK 395


>gi|71891737|dbj|BAA13407.2| KIAA0279 protein [Homo sapiens]
          Length = 2854

 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 70/219 (31%), Positives = 102/219 (46%), Gaps = 22/219 (10%)

Query: 25  RYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWL 81
           R ALATL +    T+  +  F + EY  S  ENL V Y +LTV     + P +  + Y L
Sbjct: 200 RSALATLTILVTDTNDHDPVFEQQEYKESLRENLEVGYEVLTVRATDGDAPPNANILYRL 259

Query: 82  SNDYG----ERFSIS-RQGDISLMQCLDYETEDSYRFTVYATDT-----LMTTSATVNIS 131
               G    E F I  R G I     +D E  +SY+ TV A+D        +T+A V +S
Sbjct: 260 LEGSGGSPSEVFEIDPRSGVIRTRGPVDREEVESYQLTVEASDQGRDPGPRSTTAAVFLS 319

Query: 132 VVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYE 188
           V + ND  P+F   +Y + +      D+TPG+ + +V A+D DKG    +    + G   
Sbjct: 320 VEDDNDNAPQFSEKRYVVQV----REDVTPGAPVLRVTASDRDKGSNAVVHYSIMSGNAR 375

Query: 189 KMFSIN-DSGHISIVD-LSALNTSTIQLVVVATDTGNPP 225
             F ++  +G + +V  L    T    L V A D G PP
Sbjct: 376 GQFYLDAQTGALDVVSPLDYETTKEYTLRVRAQDGGRPP 414



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 50/171 (29%), Positives = 80/171 (46%), Gaps = 15/171 (8%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGERFSIS---RQGDIS 98
           F    +  + LE++P+ Y++L V     +   + R++Y L+   G  F  +     G IS
Sbjct: 436 FVSTPFQATVLESVPLGYLVLHVQAIDADAGDNARLEYRLAG-VGHDFPFTINNGTGWIS 494

Query: 99  LMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIP 155
           +   LD E  D Y F V A D     +T SA+V+++V++VND +P F  P+Y + L    
Sbjct: 495 VAAELDREEVDFYSFGVEARDHGTPALTASASVSVTVLDVNDNNPTFTQPEYTVRLNE-- 552

Query: 156 LADLTPGSVIGKVEAADGDKGDRVTLSL-RGPYEKMFSINDSGHISIVDLS 205
             D   G+ +  V A D D    +T  +  G     FSI       +V L+
Sbjct: 553 --DAAVGTSVVTVSAVDRDAHSVITYQITSGNTRNRFSITSQSGGGLVSLA 601



 Score = 44.7 bits (104), Expect = 0.072,   Method: Compositional matrix adjust.
 Identities = 50/189 (26%), Positives = 86/189 (45%), Gaps = 14/189 (7%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRDLR--VKYWL-SNDYGERFSISRQ---GDIS 98
           F++ EY+V   E+  V   ++TV+    RD    + Y + S +   RFSI+ Q   G +S
Sbjct: 541 FTQPEYTVRLNEDAAVGTSVVTVSAVD-RDAHSVITYQITSGNTRNRFSITSQSGGGLVS 599

Query: 99  LMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLAD 158
           L   LDY+ E  Y   V A+D     +A + ++V + N   P F+   Y + +      D
Sbjct: 600 LALPLDYKLERQYVLAVTASDGTRQDTAQIVVNVTDANTHRPVFQSSHYTVNVNE----D 655

Query: 159 LTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSINDSGHISI-VDLSALNTSTIQLV 215
              G+ +  + A D D G+  R+T  +     +     D+G ++   +L   +  +  L 
Sbjct: 656 RPAGTTVVLISATDEDTGENARITYFMEDSIPQFRIDADTGAVTTQAELDYEDQVSYTLA 715

Query: 216 VVATDTGNP 224
           + A D G P
Sbjct: 716 ITARDNGIP 724



 Score = 44.7 bits (104), Expect = 0.073,   Method: Compositional matrix adjust.
 Identities = 40/149 (26%), Positives = 69/149 (46%), Gaps = 10/149 (6%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWL-SNDYGERFSIS-RQGDISL 99
           F ++E+ V   EN P+   +  VT   P +    ++ Y +   +  E F +    G+++ 
Sbjct: 852 FEQDEFDVFVEENSPIGLAVARVTATDPDEGTNAQIMYQIVEGNIPEVFQLDIFSGELTA 911

Query: 100 MQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPH--IPLA 157
           +  LDYE    Y   + AT   + + ATV++ +++ ND  P      +E+   +     +
Sbjct: 912 LVDLDYEDRPEYVLVIQATSAPLVSRATVHVRLLDRNDNPPVLG--NFEILFNNYVTNRS 969

Query: 158 DLTPGSVIGKVEAADGDKGDRVTLSL-RG 185
              PG  IG+V A D D  D +T S  RG
Sbjct: 970 SSFPGGAIGRVPAHDPDISDSLTYSFERG 998


>gi|47215506|emb|CAG01168.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 1122

 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 66/217 (30%), Positives = 105/217 (48%), Gaps = 20/217 (9%)

Query: 25  RYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWL 81
           R A + L V+ + T+     F +NEY VS  EN+ V + ++T+     + P +  + Y +
Sbjct: 313 RSATSYLTVTVSDTNDHSPVFEQNEYRVSIRENVEVGFEVMTIRATDGDAPSNANMVYKI 372

Query: 82  SNDYG--ERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDT-----LMTTSATVNISVV 133
            ND G    F I SR G + + +  D ET+D Y+  V A D        + +ATVNISV 
Sbjct: 373 VNDDGVNSVFEIDSRNGLVRIRERPDRETKDRYQLIVEANDQGKDPGPRSATATVNISVE 432

Query: 134 NVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKM 190
           + ND  P+F   +Y + +P     ++   + I +VEA D D+G+   +    + G     
Sbjct: 433 DENDNYPQFSKKRYVVQVPE----NVAVNTKIIQVEATDQDEGNNAKVHYSIISGNIRGQ 488

Query: 191 FSIND-SGHISIVD-LSALNTSTIQLVVVATDTGNPP 225
           F I+  +G I I++ L         L + A D G PP
Sbjct: 489 FYIHSPTGVIDIINPLDYEMIREYSLRIKAQDGGRPP 525



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 53/192 (27%), Positives = 92/192 (47%), Gaps = 14/192 (7%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLR--VKYWLSN-DYGERFSISRQ---GDI 97
           +  +  YS+   E+  V   +LTVT    RD+   V Y +S+ +   RF+I+ Q   G I
Sbjct: 609 ELDQKVYSLKINEDAIVGTSVLTVTAVD-RDVNSVVTYQISSGNTRNRFAITSQSGGGLI 667

Query: 98  SLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLA 157
           +L   LDY+ E  Y  T+ A+D     +A V I+V + N   P F+   Y++ L      
Sbjct: 668 TLALPLDYKQERQYVLTITASDGTRYDTAQVFINVTDANTHRPVFQSANYQVTLSE---- 723

Query: 158 DLTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSINDSGHISI-VDLSALNTSTIQL 214
           D   G+ +  + A D D G+  R+T  +     +     D+G I+  +++   + ++  L
Sbjct: 724 DRPVGTTVMAISATDEDTGENARITYVMEDNVPQFKIDPDTGTITTQMEIDYEDQASFTL 783

Query: 215 VVVATDTGNPPR 226
            ++A D G P +
Sbjct: 784 AIIAKDNGIPQK 795



 Score = 48.5 bits (114), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 41/142 (28%), Positives = 67/142 (47%), Gaps = 9/142 (6%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWL-SNDYGERFSIS-RQGDISL 99
            F K+   +   EN PV  V+  +T   P +    ++ Y +   +  E F +    GD+  
Sbjct: 921  FEKDVLFIDVEENSPVGSVVARITATDPDEGSNAQIMYQIVEGNIPEVFQLDIFNGDLVS 980

Query: 100  MQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPH--IPLA 157
            +  LDYET   Y   V AT   + + ATV+I +V+ ND  P  +   +E+   +     +
Sbjct: 981  LTDLDYETRKEYTIVVQATSAPLVSRATVHIRLVDCNDNPPVLQ--DFEIIFNNYITNKS 1038

Query: 158  DLTPGSVIGKVEAADGDKGDRV 179
            +  P  +IGKV A D D  D++
Sbjct: 1039 NSFPAGIIGKVPARDPDVSDKL 1060



 Score = 45.4 bits (106), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 53/216 (24%), Positives = 87/216 (40%), Gaps = 35/216 (16%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTTNKPRDL---RVKYWLSNDYGER----FSIS-RQG 95
           QF    Y VS  EN P    ++TV    P D    R++Y +      R    F I  R G
Sbjct: 224 QFQLPNYQVSVPENEPKGTRVITVKATDPDDGEAGRLEYSMEAMLDSRSNAFFEIDLRTG 283

Query: 96  DISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLP 152
            I+  + LD E +D++ F V  TD      + ++ + ++V + ND  P F   +Y + + 
Sbjct: 284 SITTSRPLDREFKDTHVFKVTVTDNGSPKRSATSYLTVTVSDTNDHSPVFEQNEYRVSIR 343

Query: 153 HIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSGHISIVDLSALN---- 208
                ++  G  +  + A DGD      +  +        +ND G  S+ ++ + N    
Sbjct: 344 E----NVEVGFEVMTIRATDGDAPSNANMVYK-------IVNDDGVNSVFEIDSRNGLVR 392

Query: 209 ---------TSTIQLVVVATDTGNPPRQASVPAIMH 235
                        QL+V A D G  P   S  A ++
Sbjct: 393 IRERPDRETKDRYQLIVEANDQGKDPGPRSATATVN 428



 Score = 45.1 bits (105), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 55/220 (25%), Positives = 96/220 (43%), Gaps = 18/220 (8%)

Query: 25  RYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWL 81
           RY  A + ++    +     F    Y V+  E+ PV   ++ ++    +   + R+ Y +
Sbjct: 692 RYDTAQVFINVTDANTHRPVFQSANYQVTLSEDRPVGTTVMAISATDEDTGENARITYVM 751

Query: 82  SNDYGERFSIS-RQGDISLMQCLDYETEDSYRFTVYATDTLM---TTSATVNISVVNVND 137
            ++  + F I    G I+    +DYE + S+   + A D  +   + +A V I +++ ND
Sbjct: 752 EDNVPQ-FKIDPDTGTITTQMEIDYEDQASFTLAIIAKDNGIPQKSDTAYVEIIILDAND 810

Query: 138 WDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRG--PYEKMFSI 193
             P+F    Y+  +    L D    + + ++ A+D D     RV+ + +G    E  F I
Sbjct: 811 NAPQFLRDMYQGTV----LEDAPVFTSVLQISASDRDSSTNGRVSYTFQGGDDGEGDFII 866

Query: 194 ND-SGHISIV-DLSALNTSTIQLVVVATDTGNPPRQASVP 231
              SG I I   L   N     L   A D G PP +A+VP
Sbjct: 867 ETYSGIIRIARKLDRENVPVYNLKAFAVDRGVPPLKAAVP 906



 Score = 38.9 bits (89), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 50/170 (29%), Positives = 77/170 (45%), Gaps = 15/170 (8%)

Query: 25  RYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWL 81
           R A AT+ +S    +    QFSK  Y V   EN+ VN  ++ V     ++  + +V Y +
Sbjct: 421 RSATATVNISVEDENDNYPQFSKKRYVVQVPENVAVNTKIIQVEATDQDEGNNAKVHYSI 480

Query: 82  --SNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDT----LMTTSATVNISVVNV 135
              N  G+ +  S  G I ++  LDYE    Y   + A D     L+  +  V + VV+V
Sbjct: 481 ISGNIRGQFYIHSPTGVIDIINPLDYEMIREYSLRIKAQDGGRPPLINGTGMVVVQVVDV 540

Query: 136 NDWDPRF-RYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR 184
           ND  P F   P     L ++P+     G  +  ++A DGD G+   L  R
Sbjct: 541 NDNTPMFVSTPFQATVLENVPV-----GYSVIHIQAIDGDSGENARLEYR 585



 Score = 38.5 bits (88), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 58/233 (24%), Positives = 103/233 (44%), Gaps = 37/233 (15%)

Query: 18  IQYDNQDRYALATL-----IVSKAGTSLREL----------QFSKNEYSVSALENLPVNY 62
           I Y++Q  + LA +     I  K+ T+  E+          QF ++ Y  + LE+ PV  
Sbjct: 773 IDYEDQASFTLAIIAKDNGIPQKSDTAYVEIIILDANDNAPQFLRDMYQGTVLEDAPVFT 832

Query: 63  VLLTVTTNKPRDL----RVKY-WLSNDYGERFSI--SRQGDISLMQCLDYETEDSYRFTV 115
            +L ++ +  RD     RV Y +   D GE   I  +  G I + + LD E    Y    
Sbjct: 833 SVLQISASD-RDSSTNGRVSYTFQGGDDGEGDFIIETYSGIIRIARKLDRENVPVYNLKA 891

Query: 116 YATDTL---MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTP-GSVIGKVEAA 171
           +A D     +  +  +++ V ++ND  P F     E  +  I + + +P GSV+ ++ A 
Sbjct: 892 FAVDRGVPPLKAAVPIHVVVQDINDNAPVF-----EKDVLFIDVEENSPVGSVVARITAT 946

Query: 172 DGDKGDRVTLS---LRGPYEKMFSIN--DSGHISIVDLSALNTSTIQLVVVAT 219
           D D+G    +    + G   ++F ++  +   +S+ DL         +VV AT
Sbjct: 947 DPDEGSNAQIMYQIVEGNIPEVFQLDIFNGDLVSLTDLDYETRKEYTIVVQAT 999


>gi|410033344|ref|XP_003308299.2| PREDICTED: LOW QUALITY PROTEIN: cadherin EGF LAG seven-pass G-type
           receptor 2 [Pan troglodytes]
          Length = 2887

 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 70/219 (31%), Positives = 103/219 (47%), Gaps = 22/219 (10%)

Query: 25  RYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWL 81
           R ALATL +    T+  +  F + EY  S  ENL V Y +LTV     + P +  + Y L
Sbjct: 247 RSALATLTILVTDTNDHDPVFEQQEYKESLRENLEVGYEVLTVRATDGDAPPNANILYRL 306

Query: 82  SNDYG----ERFSIS-RQGDISLMQCLDYETEDSYRFTVYATD-----TLMTTSATVNIS 131
               G    E F I  R G I     +D E  +SY+ TV A+D     +  +T+A V +S
Sbjct: 307 LEGSGGSPSEVFEIDPRSGVIRTRGPVDREEVESYQLTVEASDQGRDPSPRSTTAAVFLS 366

Query: 132 VVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYE 188
           V + ND  P+F   +Y + +      D+TPG+ + +V A+D DKG    +    + G   
Sbjct: 367 VEDDNDNAPQFSEKRYVVQV----REDVTPGAPVLRVTASDRDKGSNALVHYSIMSGNAR 422

Query: 189 KMFSIN-DSGHISIVD-LSALNTSTIQLVVVATDTGNPP 225
             F ++  +G + +V  L    T    L V A D G PP
Sbjct: 423 GQFYLDAQTGALDVVSPLDYETTKEYTLRVRAQDGGRPP 461



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 50/171 (29%), Positives = 80/171 (46%), Gaps = 15/171 (8%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGERFSIS---RQGDIS 98
           F    +  + LE++P+ Y++L V     +   + R++Y L+   G  F  +     G IS
Sbjct: 483 FVSTPFQATVLESVPLGYLVLHVQAIDADAGDNARLEYRLAG-VGHDFPFTINNGTGWIS 541

Query: 99  LMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIP 155
           +   LD E  D Y F V A D     +T SA+V+++V++VND +P F  P+Y + L    
Sbjct: 542 VAAELDREEVDFYSFGVEARDHGTPALTASASVSVTVLDVNDNNPTFTQPEYTVRLNE-- 599

Query: 156 LADLTPGSVIGKVEAADGDKGDRVTLSL-RGPYEKMFSINDSGHISIVDLS 205
             D   G+ +  V A D D    +T  +  G     FSI       +V L+
Sbjct: 600 --DAAVGTSVVTVSAVDRDAHSVITYQITSGNTRNRFSITSQSGGGLVSLA 648



 Score = 44.7 bits (104), Expect = 0.086,   Method: Compositional matrix adjust.
 Identities = 50/189 (26%), Positives = 86/189 (45%), Gaps = 14/189 (7%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRDLR--VKYWL-SNDYGERFSISRQ---GDIS 98
           F++ EY+V   E+  V   ++TV+    RD    + Y + S +   RFSI+ Q   G +S
Sbjct: 588 FTQPEYTVRLNEDAAVGTSVVTVSAVD-RDAHSVITYQITSGNTRNRFSITSQSGGGLVS 646

Query: 99  LMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLAD 158
           L   LDY+ E  Y   V A+D     +A + ++V + N   P F+   Y + +      D
Sbjct: 647 LALPLDYKLERQYVLAVTASDGTRQDTAQIVVNVTDANTHRPVFQSSHYTVNVNE----D 702

Query: 159 LTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSINDSGHISI-VDLSALNTSTIQLV 215
              G+ +  + A D D G+  R+T  +     +     D+G ++   +L   +  +  L 
Sbjct: 703 RPAGTTVVLISATDEDTGENARITYFMEDSIPQFRIDADTGAVTTQAELDYEDQVSYTLA 762

Query: 216 VVATDTGNP 224
           + A D G P
Sbjct: 763 ITARDNGIP 771



 Score = 42.4 bits (98), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 39/149 (26%), Positives = 68/149 (45%), Gaps = 10/149 (6%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWL-SNDYGERFSIS-RQGDISL 99
            F ++E+ V    N P+   +  VT   P +    ++ Y +   +  E F +    G+++ 
Sbjct: 899  FEQDEFDVFVEHNSPIGLAVARVTATDPDEGTNAQIMYQIVEGNIPEVFQLDIFSGELTA 958

Query: 100  MQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPH--IPLA 157
            +  LDYE    Y   + AT   + + ATV++ +++ ND  P      +E+   +     +
Sbjct: 959  LVDLDYEDRPEYVLVIQATSAPLVSRATVHVRLLDRNDNPPVLG--NFEILFNNYVTNRS 1016

Query: 158  DLTPGSVIGKVEAADGDKGDRVTLSL-RG 185
               PG  IG+V A D D  D +T S  RG
Sbjct: 1017 SSFPGGAIGRVPAHDPDISDSLTYSFERG 1045


>gi|195118208|ref|XP_002003632.1| GI18019 [Drosophila mojavensis]
 gi|193914207|gb|EDW13074.1| GI18019 [Drosophila mojavensis]
          Length = 2980

 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 61/219 (27%), Positives = 94/219 (42%), Gaps = 32/219 (14%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSN------------------ 83
           F ++EY+V+  E+ P+N  ++ V     +   + R+ Y + +                  
Sbjct: 405 FERDEYAVNVSESRPINAQIIQVNASDLDTGNNARITYRIVDAGADNASQSLANAGGPDA 464

Query: 84  DYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWD 139
           D  + F I    G I L   LD E+ D Y  TV ATD         A V + V++ ND D
Sbjct: 465 DLAQHFGIFPNSGWIYLRAALDRESRDRYELTVLATDNGTPAAHARARVLVRVLDANDND 524

Query: 140 PRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSIND-SG 197
           P+F+   YE  +      +L  G+V+G V A+D D G+   +     P    F ++  +G
Sbjct: 525 PKFQRESYEFRIEE----NLRRGAVVGVVSASDADLGENAAIRYSLLPANSSFQVHPVTG 580

Query: 198 HISIVD-LSALNTSTIQLVVVATDTGNPPRQASVPAIMH 235
            IS  + L         L+V A D G P R A  P  +H
Sbjct: 581 EISTREPLDRELRELYDLMVEARDQGTPTRSARAPVRVH 619



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 68/210 (32%), Positives = 106/210 (50%), Gaps = 28/210 (13%)

Query: 42   ELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVK----YWLSNDYGERFSI-SRQGD 96
            E  F + +Y  S  EN  +   +L +   +  DL V     Y L+N+   +F+I    G 
Sbjct: 1332 EPHFDQPKYVASVPENAAIGSSVLRINA-RDADLGVNSKLVYSLANETQWQFAIDGTSGL 1390

Query: 97   ISLMQCLDYETEDSYRFTVYATDT----LMTTSATVNISVVNVNDWDPRF-RYPQYELFL 151
            I+ +  LD E + SY F V ATD     + ++S  V I+V++VND  P F RYP    + 
Sbjct: 1391 ITTVGKLDRELQASYSFMVLATDCGRYEVRSSSVAVQINVLDVNDNKPVFERYP----YT 1446

Query: 152  PHIPLADLTPGSVIGKVEAADGDKGD--------RVTLSLRGPYEK-MFSIN-DSGHISI 201
              +P A + PG  + KV+A D D+G         +   +L G   +  F IN ++G +S 
Sbjct: 1447 GQVP-ALIQPGQTLLKVQAHDADQGANGDVLYALKADSTLTGAAMRSKFRINPNTGALSA 1505

Query: 202  VD-LSALNTSTIQLVVVATDTGNPPRQASV 230
               L++   + +QL ++A D GNPP Q+SV
Sbjct: 1506 TQSLASETGNLLQLEIIARDKGNPP-QSSV 1534



 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 64/242 (26%), Positives = 106/242 (43%), Gaps = 36/242 (14%)

Query: 17  AIQYDNQDRYALATLIV--------SKAGTSLREL-------QFSKNEYSVSALENLPVN 61
           A+  +++DRY L  L          ++A   +R L       +F +  Y     ENL   
Sbjct: 484 ALDRESRDRYELTVLATDNGTPAAHARARVLVRVLDANDNDPKFQRESYEFRIEENLRRG 543

Query: 62  YVLLTVTTNKP---RDLRVKYWL--SNDYGERFSISRQGDISLMQCLDYETEDSYRFTVY 116
            V+  V+ +      +  ++Y L  +N   +   ++  G+IS  + LD E  + Y   V 
Sbjct: 544 AVVGVVSASDADLGENAAIRYSLLPANSSFQVHPVT--GEISTREPLDRELRELYDLMVE 601

Query: 117 ATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADG 173
           A D      +  A V + V +VND  P    PQ ++        +  PG+ + ++ A D 
Sbjct: 602 ARDQGTPTRSARAPVRVHVTDVNDNAPEIADPQEDVVSVR---EEQPPGTEVVRIRAIDR 658

Query: 174 DKGDRVTLS---LRG---PYEKMFSIN-DSGHISI-VDLSALNTSTIQLVVVATDTGNPP 225
           D G   +++   L+G       +FSI+ ++G I   V L     S  +L V ATD GNPP
Sbjct: 659 DHGQNASINYSLLKGRDSDGHGLFSIDANTGVIRTRVVLDHEERSIYRLAVAATDGGNPP 718

Query: 226 RQ 227
           +Q
Sbjct: 719 KQ 720



 Score = 47.4 bits (111), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 46/140 (32%), Positives = 71/140 (50%), Gaps = 9/140 (6%)

Query: 92  SRQGDISLMQCLDYETEDSYRFTVYATDT-LMTTSATVNISVVNVNDWDPRFRYPQYELF 150
           S  G+I +   LDYE  +SY F V ATD   ++T+A + + + +VND  P F   +Y + 
Sbjct: 20  SASGEICIAGELDYERRNSYEFPVLATDRGGLSTTAMIKLQLTDVNDNRPVFYPREYNVS 79

Query: 151 LPHIPLADLTPGSV-IGKVEAADGDKGDRVTLSLR---GPYEKMFSIND-SGHISIV--D 203
           L     A  +  S+ I  V A D D G    +S R   G    +F I+  SG I +V  D
Sbjct: 80  LRESGPAQGSGSSMPIVAVVATDPDAGSFGQVSYRIVAGNEGGIFRIDRASGEIFVVRPD 139

Query: 204 LSALNTSTIQLV-VVATDTG 222
           + ++ T  + ++ + ATD G
Sbjct: 140 MLSVRTQAMHILNISATDGG 159



 Score = 44.3 bits (103), Expect = 0.099,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 76/168 (45%), Gaps = 25/168 (14%)

Query: 79   YWLSNDYG-ER-----FSISR-QGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNIS 131
            Y L ND   ER     FSI R  G + L + LDYE +  Y+  + A+D       T+ + 
Sbjct: 1855 YRLGNDSPVERDNLMHFSIDRYSGKLVLKRRLDYELQQEYQLEIIASDAAHEARTTLTVR 1914

Query: 132  VVNVNDWDPRF---RYPQYELFLPHIPLADLTPGSVIG----KVEAADGD---KGDRVTL 181
            V + ND  PRF   + P Y   LP     +L   S +      V A D D   +  R++ 
Sbjct: 1915 VADENDNAPRFVAQKPPAYFALLP--AATELLESSSMDVELVTVNATDADAEGRNSRISY 1972

Query: 182  SLRGPYEKMFSINDSGHISIVDLS----ALNTSTIQLV-VVATDTGNP 224
             +  P    FS++ +  +  V++S    A+++S    V +VA D G P
Sbjct: 1973 HIEPPVAG-FSVHATTGVVSVNMSHLPAAVSSSGDYFVGIVARDAGKP 2019



 Score = 43.5 bits (101), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 62/213 (29%), Positives = 97/213 (45%), Gaps = 33/213 (15%)

Query: 45  FSKNEYSVSALENLPVNYVLLTV---TTNKPRDLRVKYWL-SNDYGERFSIS-RQGDISL 99
           F K  Y+    E++P N V+ +V   +++  +   V+Y + S D    FSI    G+I +
Sbjct: 183 FEKARYNYYVKEDVPRNTVVGSVIATSSDTAQRSPVRYSIYSGDPDGYFSIEPASGNIRI 242

Query: 100 MQCLDYETEDSYRFTVYAT--DTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLA 157
            + LD+E +      + AT  D  +     VNI V +VND  P F      + +P    A
Sbjct: 243 ARPLDHEAKAQVLLNIQATSGDPPVYGHTQVNIEVEDVNDNAPEFETSMVRISVPEN--A 300

Query: 158 DLTPGSVIGKVEAADGDKGD--RVTLSL----------RGPYE----KMFSIN-DSGHIS 200
           +L  G+ +    A D D G   +VT S+          RG  +     +F+I+  SGH+ 
Sbjct: 301 EL--GTPLFAAHAHDKDSGSSGQVTYSITGNANATQPGRGKAQPTGAALFAIDARSGHLV 358

Query: 201 IVDLSALNTSTIQ---LVVVATDTGNPPRQASV 230
           +     L+  T Q   L+V ATD G PP  A +
Sbjct: 359 LS--RHLDYETAQRHSLIVTATDGGLPPLSADL 389



 Score = 43.5 bits (101), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 57/210 (27%), Positives = 96/210 (45%), Gaps = 18/210 (8%)

Query: 26   YALATLIVSKAGTSLRELQFSKNE-YSVSALENLPVNYVLLTVTTNKPRDLRVKYWLS-- 82
            + +ATLI+S    +    +F     Y +S  EN   + +   V ++    +  +   S  
Sbjct: 1211 FDVATLIISIGDVNDNAPEFRPGSCYGLSVPENSESSVIHTVVASDLDEGVNAEIVYSII 1270

Query: 83   -NDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATD--TLMTTSATVNISVV--NVN 136
              + G +FSI +R G++S  + LD E    Y   + A+D    +T     NISV   + N
Sbjct: 1271 GGNLGNKFSIDARTGELS-ARPLDREQHARYTLQLQASDRGQPITHQGHCNISVFVEDQN 1329

Query: 137  DWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIN 194
            D +P F  P+Y   +P     +   GS + ++ A D D G   ++  SL    +  F+I+
Sbjct: 1330 DNEPHFDQPKYVASVPE----NAAIGSSVLRINARDADLGVNSKLVYSLANETQWQFAID 1385

Query: 195  D-SGHISIV-DLSALNTSTIQLVVVATDTG 222
              SG I+ V  L     ++   +V+ATD G
Sbjct: 1386 GTSGLITTVGKLDRELQASYSFMVLATDCG 1415



 Score = 39.3 bits (90), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 31/108 (28%), Positives = 47/108 (43%), Gaps = 12/108 (11%)

Query: 95   GDISLMQCLDYETEDSYRFTVYATDTL-MTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
            G +S     DYE    Y   + A+D    +    V + + + +++ P+F    Y   LP 
Sbjct: 2322 GIVSSGAVFDYEQRQRYNLQLRASDMGGRSARVAVRVEIESRDEFTPQFTERTYRFALPA 2381

Query: 154  ---IPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDS 196
               +PL     G V+G+V A D D G   RV   L  P+   F +N S
Sbjct: 2382 STALPL-----GFVVGQVTATDADSGADGRVVYQLSAPHSH-FKVNRS 2423



 Score = 38.9 bits (89), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 46/102 (45%), Gaps = 10/102 (9%)

Query: 89  FSISRQ-GDISLMQCLDYETEDSYRFTVYATDTL-----MTTSATVNISVVNVNDWDPRF 142
           F I R  G++ + + LD E +  +R  + A DT       +++ TV I V +VND  PR+
Sbjct: 802 FDIDRNTGNLVVARQLDRELQSEFRLEIRALDTSASNNPQSSAITVKIEVADVNDNAPRW 861

Query: 143 RYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR 184
                EL +       L  G++I    A D D G    L  R
Sbjct: 862 PLDPIELQVSE----SLPVGAIIHNFTATDADSGTNGELQYR 899


>gi|51854233|ref|NP_001004087.1| protocadherin-7 precursor [Rattus norvegicus]
 gi|51346003|gb|AAU01515.1| protocadherin 7c1 [Rattus norvegicus]
 gi|149047190|gb|EDL99859.1| protocadherin 7, isoform CRA_b [Rattus norvegicus]
          Length = 1247

 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 62/203 (30%), Positives = 92/203 (45%), Gaps = 21/203 (10%)

Query: 37  GTSLRELQFSKNEYSVSALENLPVNYV--LLTVTTNKPRDLRVKYWLSNDYGERFSIS-R 93
           G S+ E+ F +N        N+P   V  +L    +  ++  + Y L +     F+I   
Sbjct: 536 GQSVVEVYFPEN--------NIPGERVATVLATDADSGKNAEIAYSLDSSVMGTFAIDPD 587

Query: 94  QGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELF 150
            GDI +   LD E  D Y F V A D    ++  S TV + V + ND DP+F    +  +
Sbjct: 588 SGDILVNTVLDREQTDRYEFKVNAKDKGIPVLQGSTTVIVQVADKNDNDPKFMQDVFTFY 647

Query: 151 LPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSI-NDSGHI-SIVDLSAL 207
           +      +L P S +G V   D DKG    +SL       +FSI ND+G I S +     
Sbjct: 648 VKE----NLQPNSPVGMVTVMDADKGRNAEMSLYIEENSNIFSIENDTGTIYSTMSFDRE 703

Query: 208 NTSTIQLVVVATDTGNPPRQASV 230
           + +T    V A D G+PPR A+ 
Sbjct: 704 HQTTYTFRVKAVDGGDPPRSATA 726



 Score = 41.2 bits (95), Expect = 0.83,   Method: Compositional matrix adjust.
 Identities = 40/150 (26%), Positives = 68/150 (45%), Gaps = 26/150 (17%)

Query: 93  RQGDISLMQCLDYETEDSYRFTVY---ATDTLMTTSATVNISVVNVNDWDPRFRYPQYEL 149
           +Q  + +   LD E  DSY  T+      D   ++ A + + + +VND  PRF    YE 
Sbjct: 256 KQPQLIVKGALDREQRDSYELTLRVRDGGDPPRSSQAILRVLITDVNDNSPRFEKSVYEA 315

Query: 150 FLPHIPLADLTPGSVIGKVEAADGDKG---------DRVTLSLRGPYEKMFSIND-SGHI 199
            L      +  PG+ I ++ A D D G            T S+R    ++  +++ SG +
Sbjct: 316 DLAE----NSAPGTPILQLRATDLDVGVNGQIEYVFGAATESVR----RLLRLDETSGWL 367

Query: 200 SI---VDLSALNTSTIQLVVVATDTGNPPR 226
           S+   +D   +N   ++  V+A D G PP+
Sbjct: 368 SVLHRIDREEVN--QLRFTVMARDRGQPPK 395


>gi|157951641|ref|NP_001074755.2| FAT tumor suppressor homolog 1 precursor [Mus musculus]
          Length = 4590

 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 65/218 (29%), Positives = 107/218 (49%), Gaps = 20/218 (9%)

Query: 29   ATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRD----LRVKYWLSND 84
            A + V+  G +L    F +NEY V   EN P++ +++ V  +  RD      V Y + ND
Sbjct: 2478 ARVNVTVMGGNLHSPVFHQNEYEVELAENAPLHTLVVQVKASD-RDSGIYSHVTYHIVND 2536

Query: 85   YG-ERFSISRQGDISLMQCLDYET--EDSYRFTVYATDTLMTTS-ATVNISVVNVNDWDP 140
            +  +RF ++ +G I  ++ LD ET  E      + A D     +  TVN+ + + ND  P
Sbjct: 2537 FAKDRFYVNDRGQIFTLEKLDRETPAEKVISIRLMAKDAGGKVAFCTVNVILTDDNDNAP 2596

Query: 141  RFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDR--VTLSLRGPYEKM---FSIND 195
            +FR  +YE+ +     +    G+ + KV A+D D+G    VT ++    E +     IN 
Sbjct: 2597 QFRSTKYEVNIG----SSAAKGTSVVKVFASDADEGSNADVTYAIEADSESVKENLEINK 2652

Query: 196  -SGHISIVD-LSALNTSTIQLVVVATDTGNPPRQASVP 231
             +G I+  + L  L        V A D+G+PPR++ VP
Sbjct: 2653 LTGLITTKESLIGLENEFFTFFVRAVDSGSPPRESVVP 2690



 Score = 58.9 bits (141), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 42/156 (26%), Positives = 77/156 (49%), Gaps = 11/156 (7%)

Query: 33   VSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYW---LSNDYGERF 89
            +SK   S   + F ++ +S + +E+ PV +++  ++   P    +  W   +  +Y   F
Sbjct: 1348 ISKPKPSSEPISFEESVFSFTVMESDPVAHMIGVISVEPPG---MPLWFDIIGGNYDSHF 1404

Query: 90   SISR-QGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYE 148
             + +  G I + + LD E + SY  TV ATD   T    V I V++ ND  P+F   +YE
Sbjct: 1405 DVDKGTGTIIVAKPLDAEQKSSYNLTVEATDGTTTILTQVLIKVIDTNDHRPQFSTSKYE 1464

Query: 149  LFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR 184
            + +P     D  P   I ++ A D D+ +++  +L+
Sbjct: 1465 VAVPE----DTEPEVEILQISAVDRDEKNKLIYTLQ 1496



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 70/237 (29%), Positives = 106/237 (44%), Gaps = 19/237 (8%)

Query: 5    DDFLQPI-TLVVRAIQYDNQDRY-ALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNY 62
            D  LQ + TL ++A+      R  A  T++VS    +     F   EY  S  E++ +  
Sbjct: 3190 DRELQAVYTLTLKAVDQGLPRRLTATGTVVVSVLDINDNPPVFEYREYGASVSEDIVIGT 3249

Query: 63   VLLTVTTNKPRDLRVKYWLS------NDYGERFSI-SRQGDISLMQCLDYETEDSYRFTV 115
             +L V     RD+     ++      N++G +FSI S+ G I +++ LDYE+   Y  TV
Sbjct: 3250 EVLQVYAAS-RDIEANAEITYAIISGNEHG-KFSIDSKTGAIFIIESLDYESSHEYYLTV 3307

Query: 116  YATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAAD 172
             ATD     ++  ATVNI+V ++ND  P F    Y   +     A L    +    + AD
Sbjct: 3308 EATDGGTPSLSDVATVNINVTDINDNSPVFSQDTYTTVVSED--AALEQPVITIMADDAD 3365

Query: 173  GDKGDRVTLS-LRGPYEKMFSIND-SGHISIVD-LSALNTSTIQLVVVATDTGNPPR 226
            G     +  S + G     F+I+   G + +   L     S   L V A D GNPPR
Sbjct: 3366 GPSNSHIHYSIIEGNQGSPFTIDPVRGEVKVTKPLDRETISGYTLTVQAADNGNPPR 3422



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 62/244 (25%), Positives = 114/244 (46%), Gaps = 19/244 (7%)

Query: 2    INEDDFLQPITLVVRAIQYDNQDRYALA-TLIVSKAGTSLREL--QFSKNEYSVSALENL 58
            + E D  +  +  ++ +  D+ ++  L+ T IV    T + +   +F+   Y  +  E+ 
Sbjct: 2874 LKELDHEERASYQIKVVASDHGEKVQLSSTAIVGVTVTDVNDSPPRFTAEIYKGTVSEDD 2933

Query: 59   PVNYVLLTVTTNKPR----DLRVKYWLSN-DYGERFSISR-QGD--ISLMQCLDYETEDS 110
            P   V+  ++T        + +V Y+++  D   +F++   Q D  + + + LD E +DS
Sbjct: 2934 PPGGVIAILSTTDADTEEINRQVSYFITGGDALGQFAVENVQSDWRVYVKKPLDREQKDS 2993

Query: 111  YRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEA 170
            Y  TV ATD   ++ A V + V++ ND  P      Y   +P     D  PG ++ +V A
Sbjct: 2994 YLLTVTATDGTFSSKARVEVKVLDANDNSPVCEKTSYSDTIPE----DALPGKLVMQVSA 3049

Query: 171  ADGD--KGDRVTLSLRGPYEKMFSIN-DSGHI-SIVDLSALNTSTIQLVVVATDTGNPPR 226
             D D      +T +L G   + F +N D+G + ++  L     +   L+V ATD G    
Sbjct: 3050 TDADIRSNAEITYTLFGSGAEKFKLNPDTGELRTLALLDREEQAVYNLLVKATDGGGRSC 3109

Query: 227  QASV 230
            QA++
Sbjct: 3110 QAAI 3113



 Score = 55.1 bits (131), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 56/195 (28%), Positives = 96/195 (49%), Gaps = 23/195 (11%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSN-DYGERFSIS-RQGDISLMQC 102
            F K  YS    EN+ ++  ++ +  N P  L+V Y +++ D   +F+I+   G ++++  
Sbjct: 2184 FEKAFYSAEIPENIQMHSPVVHIQANSPEGLKVFYSITDGDPFSQFTINFNTGVVNVIAP 2243

Query: 103  LDYETEDSYRFTVYATDTLMTTSATVNISVV--NVNDWDPRFRYPQYELFLPHIPLADLT 160
            LD+E+  +Y+ +V ATD+L    A V + ++  ++ND  P F  P Y           L+
Sbjct: 2244 LDFESHPAYKLSVRATDSLTGAHAEVFVDIIVEDINDNPPVFVQPSYS--------TTLS 2295

Query: 161  PGSVIG----KVEAADGDK--GDRVTLSLRGPYEK---MFSIN-DSGHISIVD-LSALNT 209
              SVIG    +V A D D      ++  L G + K    F I+ ++G IS+V  L    +
Sbjct: 2296 EASVIGTPVLQVRATDSDSEPNRGISYQLIGNHSKSHDHFHIDSNTGLISLVRALDYEQS 2355

Query: 210  STIQLVVVATDTGNP 224
               ++ V A D G P
Sbjct: 2356 QQHRIFVRAVDGGMP 2370



 Score = 51.2 bits (121), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 65/247 (26%), Positives = 113/247 (45%), Gaps = 46/247 (18%)

Query: 4    EDDFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVN-- 61
            E++F    T  VRA+   +  R ++  + +      ++  +FS+  Y+ +  E+ P+   
Sbjct: 2667 ENEFF---TFFVRAVDSGSPPRESVVPVYIKILPPEVQLPRFSEPFYTYTISEDTPIGTE 2723

Query: 62   -------------YVLLTVTTNKPRDLRVKYWLSNDYGERFSISRQ-GDISLMQCLDYET 107
                         Y+L  V  N P   R ++         F I RQ G + L + LD+ET
Sbjct: 2724 IDLIRVEHGGAVLYIL--VKGNTPESNRDEF---------FVIDRQNGRLKLEKSLDHET 2772

Query: 108  EDSYRFTVYATDTL----MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGS 163
               Y+F++ A  TL    +  S  V+I V + ND  P      YE F+    + +L  GS
Sbjct: 2773 TKWYQFSILARCTLDDYEVVASIDVSIQVKDANDNSPVLESSPYEAFI----VENLPGGS 2828

Query: 164  VIGKVEAADGDKG--DRVTLSLRGPYE----KMFSIN-DSGHISIV-DLSALNTSTIQLV 215
             + ++ A+D D G   +V  SL    +    + F+IN ++G I+ + +L     ++ Q+ 
Sbjct: 2829 RVIQIRASDLDSGANGQVMYSLDQSQDADIIESFAINMETGWITTLKELDHEERASYQIK 2888

Query: 216  VVATDTG 222
            VVA+D G
Sbjct: 2889 VVASDHG 2895



 Score = 48.1 bits (113), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 58/195 (29%), Positives = 88/195 (45%), Gaps = 20/195 (10%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTTNKPRDL----RVKYWLSNDYGERFSI-SRQGDIS 98
            +F +  Y V   E+  VN  ++ V     +DL     V Y +  D  E+FSI S  G + 
Sbjct: 822  EFLQESYFVEVSEDKEVNSEIIQVEATD-KDLGPSGHVTYAILTD-TEKFSIDSMTGVVK 879

Query: 99   LMQCLDYETEDSYRFTVYATDTL-----MTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
            ++Q LD E +  +   + A D       + ++  + +S+ +VND  PRF  P Y + +  
Sbjct: 880  IIQPLDREVQPVHYLKIEARDQATEEPRLFSTVLLKVSLDDVNDNPPRFIPPNYSVKV-- 937

Query: 154  IPLADLTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSIND-SGHISIV-DLSALNT 209
                DL  G++I  +EA D D G   +V  SL    E  F ++  SG + IV  L     
Sbjct: 938  --REDLPEGTIIMWLEAYDPDVGQSSQVRYSLLDHGEGHFDVDKLSGAVRIVQQLDFEKK 995

Query: 210  STIQLVVVATDTGNP 224
                L V A D G P
Sbjct: 996  QLYNLTVRAKDKGKP 1010



 Score = 45.8 bits (107), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 55/195 (28%), Positives = 91/195 (46%), Gaps = 25/195 (12%)

Query: 47   KNEYSVSALEN-LPVNYVLLTVTTNKPRDLR----VKYWLSNDYGERFSIS-RQGDISLM 100
            K  YS +  E+ LP   V+    T+   D+R    + Y L     E+F ++   G++  +
Sbjct: 3027 KTSYSDTIPEDALPGKLVMQVSATDA--DIRSNAEITYTLFGSGAEKFKLNPDTGELRTL 3084

Query: 101  QCLDYETEDSYRFTVYATDTL-MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADL 159
              LD E +  Y   V ATD    +  A + +++ +VND  P F    Y + +      + 
Sbjct: 3085 ALLDREEQAVYNLLVKATDGGGRSCQAAIVLTLEDVNDNAPEFTAEPYTITV----FENT 3140

Query: 160  TPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIND-SGHISI-----VDLSALNTST 211
             PG+ + +V+A D D G   +++ SL    +  FSIN+ SG I +      +L A+ T T
Sbjct: 3141 EPGTPLTRVQATDADTGLNRKISYSLVESADGQFSINERSGIIQLEKHLDRELQAVYTLT 3200

Query: 212  IQLVVVATDTGNPPR 226
            ++    A D G P R
Sbjct: 3201 LK----AVDQGLPRR 3211



 Score = 43.9 bits (102), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 58/215 (26%), Positives = 87/215 (40%), Gaps = 19/215 (8%)

Query: 24  DRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLR---VKYW 80
           D+ A A ++V   GT+    +F++  Y  S  EN P+   +  V+   P +     V Y 
Sbjct: 443 DKRASARVVVKVLGTNSNPPEFTQTSYKASIDENAPIGAAVTRVSAMDPDEGENGYVTYS 502

Query: 81  LSNDYGERFSISR-QGDISLMQCLDYE-TEDSYRFTVYATDTLMTTSATVN----ISVVN 134
           ++N     F I    G +S  + LDYE     Y   + A+D  +     V     I++ N
Sbjct: 503 IANLNHVPFVIDHFTGTVSTSENLDYELMPRVYTLRIRASDWGLPYRREVEVLATITLNN 562

Query: 135 VNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYE-KMFSI 193
           +ND  P F     E  +P     DL  G  I  V A D D+   V   +    E  +F +
Sbjct: 563 LNDNTPLFERINCEGTIPR----DLGVGEQITTVSAIDADELQLVRYQIEAGNELDLFGL 618

Query: 194 NDSGHI-----SIVDLSALNTSTIQLVVVATDTGN 223
           N S  +     S+ D      S   L + ATD  N
Sbjct: 619 NPSSGVLSLKHSLTDGLGAKVSFHSLRITATDGEN 653



 Score = 43.5 bits (101), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 56/191 (29%), Positives = 85/191 (44%), Gaps = 30/191 (15%)

Query: 56   ENLPVNYVLLTVTTNKP---RDLRVKYWLSNDYG-ERFSISRQ-GDISLMQCLDYETEDS 110
            E++P    ++TV+ +     RD  ++Y + +  G   F I  + G I     LD E+   
Sbjct: 1046 EDVPTGSSVMTVSAHDEDTGRDGEIRYSIRDGSGIGVFRIDEETGVIETSDRLDRESTSH 1105

Query: 111  YRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSV-IG 166
            Y  TVYATD     +++   V I V +VND  P+   P   ++ P I   + +P  V + 
Sbjct: 1106 YWLTVYATDQGVVPLSSFIEVYIEVEDVNDNAPQTSEP---VYYPEI--MENSPKDVSVV 1160

Query: 167  KVEAADGDKGDRVTLSLRGPYEKMFSINDSGHISIVDLSALNTSTIQ-----------LV 215
            ++EA D D      L+ R     + S N  G  SI   + L T+T +           L 
Sbjct: 1161 QIEAFDPDSSSNDKLTYR-----ITSGNPQGFFSIHPKTGLITTTSRKLDREQQDEHILE 1215

Query: 216  VVATDTGNPPR 226
            V  TD G PPR
Sbjct: 1216 VTVTDNGVPPR 1226



 Score = 40.8 bits (94), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 42/150 (28%), Positives = 70/150 (46%), Gaps = 13/150 (8%)

Query: 81   LSNDYGERFSISRQ-GDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWD 139
            LS +  + F I R+ G I+L     +  +  Y   V  +D +  +SA VN++V+  N   
Sbjct: 2432 LSGNDHKSFIIDRETGIITLSNLRRHTLKPFYSLNVSVSDGVFRSSARVNVTVMGGNLHS 2491

Query: 140  PRFRYPQYELFLPHIPLADLTP-GSVIGKVEAADGDKG--DRVTLSLRGPYEK-MFSIND 195
            P F   +YE     + LA+  P  +++ +V+A+D D G    VT  +   + K  F +ND
Sbjct: 2492 PVFHQNEYE-----VELAENAPLHTLVVQVKASDRDSGIYSHVTYHIVNDFAKDRFYVND 2546

Query: 196  SGHI---SIVDLSALNTSTIQLVVVATDTG 222
             G I     +D        I + ++A D G
Sbjct: 2547 RGQIFTLEKLDRETPAEKVISIRLMAKDAG 2576



 Score = 39.7 bits (91), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 47/194 (24%), Positives = 83/194 (42%), Gaps = 12/194 (6%)

Query: 12   TLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNY-VLLTVTTN 70
            TL V+A    N  R    T+ +  +  +     FS++ YSV   EN PV + VL  V T+
Sbjct: 3409 TLTVQAADNGNPPRVNTTTVNIDVSDVNDNAPLFSRDNYSVIIQENKPVGFSVLKLVVTD 3468

Query: 71   KPRDLRVKYWL----SNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDT---LMT 123
            K        +     S +    F +++ G +     +  + +D Y   V   D+    ++
Sbjct: 3469 KDSSHNGPPFFFTIVSGNDENAFEVNQHGVLLTAATIKRKVKDHYLLHVKVADSGKPQLS 3528

Query: 124  TSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSL 183
            +   ++I V+  +   P       E+F+      +   G VIGK+ A D D  D +  SL
Sbjct: 3529 SMTHIDIRVIEESIHPPAIL--PLEIFI--TAFGEEYSGGVIGKIHATDQDVYDTLMYSL 3584

Query: 184  RGPYEKMFSINDSG 197
                + +FS++ +G
Sbjct: 3585 DPHMDGLFSVSSTG 3598



 Score = 37.7 bits (86), Expect = 9.6,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 62/138 (44%), Gaps = 12/138 (8%)

Query: 103  LDYETEDSYRFTVYATDTLM---TTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLAD- 158
            LD E +D +   V  TD  +   +T A V + +++ ND  P+F    Y++ LP    AD 
Sbjct: 1204 LDREQQDEHILEVTVTDNGVPPRSTIARVIVKILDENDNRPQFLQKFYKIRLPEREKADG 1263

Query: 159  ---LTPGSVIGKVEAADGDKGDRVTLSL---RGPYEKMFSIN-DSGHISIVDLSALNTST 211
                +    + +V AAD D+G    LS     G     FSI   +G +S    SA     
Sbjct: 1264 DRSASKREPLYRVIAADKDEGPNAELSYSIEEGNEHGRFSIEPKTGVVSSKKFSAAGEYD 1323

Query: 212  IQLVVVATDTGNPPRQAS 229
            I L + A D G P + ++
Sbjct: 1324 I-LSIKAVDNGRPQKSST 1340


>gi|345793799|ref|XP_003433807.1| PREDICTED: protocadherin gamma-C4 [Canis lupus familiaris]
          Length = 856

 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 63/230 (27%), Positives = 102/230 (44%), Gaps = 22/230 (9%)

Query: 13  LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKP 72
           LV+ A+   N  R   A L VS    +     F ++ Y +S LE+ P   +L+ +  + P
Sbjct: 210 LVLTAVDGGNPPRSGTAELRVSVLDVNDNAPAFQQSSYRISVLESAPAGMLLIQLNASDP 269

Query: 73  RDL----RVKYWLSNDYGER----FSI-SRQGDISLMQCLDYETEDSYRFTVYATD---T 120
            DL     V +  S    +R    FS+    G ++L   LD+E+E+ Y F + A D    
Sbjct: 270 -DLGPSGNVTFSFSGHTPDRVRNLFSLHPTTGKLTLQGPLDFESENYYEFDIRARDGGSP 328

Query: 121 LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVT 180
            M    ++ + +++VND  P          LP        PG+V+  +   D D G    
Sbjct: 329 AMEQHCSLRVDLLDVNDNAPHITVTSELGTLPE----SAEPGTVVALISVQDPDSGSNGD 384

Query: 181 LSLRGPYEKMFSINDS--GHISIVDLSALN---TSTIQLVVVATDTGNPP 225
           +SLR P    F++  +     S+V    L+    S+  ++V A+D GNPP
Sbjct: 385 VSLRIPDHLPFALKSAFRNQFSLVTAGPLDREAKSSYDIMVTASDAGNPP 434



 Score = 47.8 bits (112), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 45/169 (26%), Positives = 78/169 (46%), Gaps = 27/169 (15%)

Query: 77  VKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVV 133
           + + L + +  +FS+   G       LD E + SY   V A+D     ++T  T+ +++ 
Sbjct: 393 LPFALKSAFRNQFSLVTAGP------LDREAKSSYDIMVTASDAGNPPLSTQRTIFLNIS 446

Query: 134 NVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMF 191
           +VND  P F    +E+F+P     +  PG ++  + A+D D G    ++ SL  P  +  
Sbjct: 447 DVNDNPPSFFQRSHEVFVPE----NNRPGDLLCSLAASDPDSGLNALISYSLLEPRNR-- 500

Query: 192 SINDSGHISIVDLSAL----------NTSTIQLVVVATDTGNPPRQASV 230
            ++ S  IS+   +             T T+Q  V A D GNPP  ++V
Sbjct: 501 DVSASSFISLNPQTGAVHATRSFDYEQTQTLQFEVQARDRGNPPLSSTV 549



 Score = 43.9 bits (102), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 49/190 (25%), Positives = 83/190 (43%), Gaps = 15/190 (7%)

Query: 95  GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYEL-- 149
           G +   +  DYE   + +F V A D     ++++ TV + V+++ND  P    P+     
Sbjct: 515 GAVHATRSFDYEQTQTLQFEVQARDRGNPPLSSTVTVRLFVLDLNDNAPAVLRPRARPGS 574

Query: 150 FLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIND-SGHISIVDLS 205
             P      +  G ++ KV A D D G    +S   L  P   +F+++  +G +      
Sbjct: 575 LCPQALPPSVGAGHLVTKVTAVDLDSGYNAWVSYQLLEAPDPSLFAVSRYAGEVRTAVPI 634

Query: 206 ALNTSTIQLVVVATDTGNPPRQASVPAIMHFPE---AIVQ--QASSKLNSGTSSTVLIIL 260
             +    +LV+V  D+G+PP   SV  ++   E    +V   + SS    G S   L  L
Sbjct: 635 PADLPPQKLVIVVKDSGSPPLSTSVTLLVSLEEDTHPVVPDLRESSAPREGESRLTL-YL 693

Query: 261 GVVLIVLGFV 270
            V L+ + FV
Sbjct: 694 AVSLVAICFV 703


>gi|148703591|gb|EDL35538.1| mCG141119 [Mus musculus]
          Length = 4592

 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 65/218 (29%), Positives = 107/218 (49%), Gaps = 20/218 (9%)

Query: 29   ATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRD----LRVKYWLSND 84
            A + V+  G +L    F +NEY V   EN P++ +++ V  +  RD      V Y + ND
Sbjct: 2480 ARVNVTVMGGNLHSPVFHQNEYEVELAENAPLHTLVVQVKASD-RDSGIYSHVTYHIVND 2538

Query: 85   YG-ERFSISRQGDISLMQCLDYET--EDSYRFTVYATDTLMTTS-ATVNISVVNVNDWDP 140
            +  +RF ++ +G I  ++ LD ET  E      + A D     +  TVN+ + + ND  P
Sbjct: 2539 FAKDRFYVNDRGQIFTLEKLDRETPAEKVISIRLMAKDAGGKVAFCTVNVILTDDNDNAP 2598

Query: 141  RFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDR--VTLSLRGPYEKM---FSIND 195
            +FR  +YE+ +     +    G+ + KV A+D D+G    VT ++    E +     IN 
Sbjct: 2599 QFRSTKYEVNIG----SSAAKGTSVVKVFASDADEGSNADVTYAIEADSESVKENLEINK 2654

Query: 196  -SGHISIVD-LSALNTSTIQLVVVATDTGNPPRQASVP 231
             +G I+  + L  L        V A D+G+PPR++ VP
Sbjct: 2655 LTGLITTKESLIGLENEFFTFFVRAVDSGSPPRESVVP 2692



 Score = 58.9 bits (141), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 42/156 (26%), Positives = 77/156 (49%), Gaps = 11/156 (7%)

Query: 33   VSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYW---LSNDYGERF 89
            +SK   S   + F ++ +S + +E+ PV +++  ++   P    +  W   +  +Y   F
Sbjct: 1350 ISKPKPSSEPISFEESVFSFTVMESDPVAHMIGVISVEPPG---MPLWFDIIGGNYDSHF 1406

Query: 90   SISR-QGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYE 148
             + +  G I + + LD E + SY  TV ATD   T    V I V++ ND  P+F   +YE
Sbjct: 1407 DVDKGTGTIIVAKPLDAEQKSSYNLTVEATDGTTTILTQVLIKVIDTNDHRPQFSTSKYE 1466

Query: 149  LFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR 184
            + +P     D  P   I ++ A D D+ +++  +L+
Sbjct: 1467 VAVPE----DTEPEVEILQISAVDRDEKNKLIYTLQ 1498



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 70/237 (29%), Positives = 106/237 (44%), Gaps = 19/237 (8%)

Query: 5    DDFLQPI-TLVVRAIQYDNQDRY-ALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNY 62
            D  LQ + TL ++A+      R  A  T++VS    +     F   EY  S  E++ +  
Sbjct: 3192 DRELQAVYTLTLKAVDQGLPRRLTATGTVVVSVLDINDNPPVFEYREYGASVSEDIVIGT 3251

Query: 63   VLLTVTTNKPRDLRVKYWLS------NDYGERFSI-SRQGDISLMQCLDYETEDSYRFTV 115
             +L V     RD+     ++      N++G +FSI S+ G I +++ LDYE+   Y  TV
Sbjct: 3252 EVLQVYAAS-RDIEANAEITYAIISGNEHG-KFSIDSKTGAIFIIESLDYESSHEYYLTV 3309

Query: 116  YATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAAD 172
             ATD     ++  ATVNI+V ++ND  P F    Y   +     A L    +    + AD
Sbjct: 3310 EATDGGTPSLSDVATVNINVTDINDNSPVFSQDTYTTVVSED--AALEQPVITIMADDAD 3367

Query: 173  GDKGDRVTLS-LRGPYEKMFSIND-SGHISIVD-LSALNTSTIQLVVVATDTGNPPR 226
            G     +  S + G     F+I+   G + +   L     S   L V A D GNPPR
Sbjct: 3368 GPSNSHIHYSIIEGNQGSPFTIDPVRGEVKVTKPLDRETISGYTLTVQAADNGNPPR 3424



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 62/244 (25%), Positives = 114/244 (46%), Gaps = 19/244 (7%)

Query: 2    INEDDFLQPITLVVRAIQYDNQDRYALA-TLIVSKAGTSLREL--QFSKNEYSVSALENL 58
            + E D  +  +  ++ +  D+ ++  L+ T IV    T + +   +F+   Y  +  E+ 
Sbjct: 2876 LKELDHEERASYQIKVVASDHGEKVQLSSTAIVGVTVTDVNDSPPRFTAEIYKGTVSEDD 2935

Query: 59   PVNYVLLTVTTNKPR----DLRVKYWLSN-DYGERFSISR-QGD--ISLMQCLDYETEDS 110
            P   V+  ++T        + +V Y+++  D   +F++   Q D  + + + LD E +DS
Sbjct: 2936 PPGGVIAILSTTDADTEEINRQVSYFITGGDALGQFAVENVQSDWRVYVKKPLDREQKDS 2995

Query: 111  YRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEA 170
            Y  TV ATD   ++ A V + V++ ND  P      Y   +P     D  PG ++ +V A
Sbjct: 2996 YLLTVTATDGTFSSKARVEVKVLDANDNSPVCEKTSYSDTIPE----DALPGKLVMQVSA 3051

Query: 171  ADGD--KGDRVTLSLRGPYEKMFSIN-DSGHI-SIVDLSALNTSTIQLVVVATDTGNPPR 226
             D D      +T +L G   + F +N D+G + ++  L     +   L+V ATD G    
Sbjct: 3052 TDADIRSNAEITYTLFGSGAEKFKLNPDTGELRTLALLDREEQAVYNLLVKATDGGGRSC 3111

Query: 227  QASV 230
            QA++
Sbjct: 3112 QAAI 3115



 Score = 55.1 bits (131), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 56/195 (28%), Positives = 96/195 (49%), Gaps = 23/195 (11%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSN-DYGERFSIS-RQGDISLMQC 102
            F K  YS    EN+ ++  ++ +  N P  L+V Y +++ D   +F+I+   G ++++  
Sbjct: 2186 FEKAFYSAEIPENIQMHSPVVHIQANSPEGLKVFYSITDGDPFSQFTINFNTGVVNVIAP 2245

Query: 103  LDYETEDSYRFTVYATDTLMTTSATVNISVV--NVNDWDPRFRYPQYELFLPHIPLADLT 160
            LD+E+  +Y+ +V ATD+L    A V + ++  ++ND  P F  P Y           L+
Sbjct: 2246 LDFESHPAYKLSVRATDSLTGAHAEVFVDIIVEDINDNPPVFVQPSYS--------TTLS 2297

Query: 161  PGSVIG----KVEAADGDK--GDRVTLSLRGPYEK---MFSIN-DSGHISIVD-LSALNT 209
              SVIG    +V A D D      ++  L G + K    F I+ ++G IS+V  L    +
Sbjct: 2298 EASVIGTPVLQVRATDSDSEPNRGISYQLIGNHSKSHDHFHIDSNTGLISLVRALDYEQS 2357

Query: 210  STIQLVVVATDTGNP 224
               ++ V A D G P
Sbjct: 2358 QQHRIFVRAVDGGMP 2372



 Score = 51.2 bits (121), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 65/247 (26%), Positives = 113/247 (45%), Gaps = 46/247 (18%)

Query: 4    EDDFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVN-- 61
            E++F    T  VRA+   +  R ++  + +      ++  +FS+  Y+ +  E+ P+   
Sbjct: 2669 ENEFF---TFFVRAVDSGSPPRESVVPVYIKILPPEVQLPRFSEPFYTYTISEDTPIGTE 2725

Query: 62   -------------YVLLTVTTNKPRDLRVKYWLSNDYGERFSISRQ-GDISLMQCLDYET 107
                         Y+L  V  N P   R ++         F I RQ G + L + LD+ET
Sbjct: 2726 IDLIRVEHGGAVLYIL--VKGNTPESNRDEF---------FVIDRQNGRLKLEKSLDHET 2774

Query: 108  EDSYRFTVYATDTL----MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGS 163
               Y+F++ A  TL    +  S  V+I V + ND  P      YE F+    + +L  GS
Sbjct: 2775 TKWYQFSILARCTLDDYEVVASIDVSIQVKDANDNSPVLESSPYEAFI----VENLPGGS 2830

Query: 164  VIGKVEAADGDKG--DRVTLSLRGPYE----KMFSIN-DSGHISIV-DLSALNTSTIQLV 215
             + ++ A+D D G   +V  SL    +    + F+IN ++G I+ + +L     ++ Q+ 
Sbjct: 2831 RVIQIRASDLDSGANGQVMYSLDQSQDADIIESFAINMETGWITTLKELDHEERASYQIK 2890

Query: 216  VVATDTG 222
            VVA+D G
Sbjct: 2891 VVASDHG 2897



 Score = 48.1 bits (113), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 58/195 (29%), Positives = 88/195 (45%), Gaps = 20/195 (10%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTTNKPRDL----RVKYWLSNDYGERFSI-SRQGDIS 98
            +F +  Y V   E+  VN  ++ V     +DL     V Y +  D  E+FSI S  G + 
Sbjct: 822  EFLQESYFVEVSEDKEVNSEIIQVEATD-KDLGPSGHVTYAILTD-TEKFSIDSMTGVVK 879

Query: 99   LMQCLDYETEDSYRFTVYATDTL-----MTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
            ++Q LD E +  +   + A D       + ++  + +S+ +VND  PRF  P Y + +  
Sbjct: 880  IIQPLDREVQPVHYLKIEARDQATEEPRLFSTVLLKVSLDDVNDNPPRFIPPNYSVKV-- 937

Query: 154  IPLADLTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSIND-SGHISIV-DLSALNT 209
                DL  G++I  +EA D D G   +V  SL    E  F ++  SG + IV  L     
Sbjct: 938  --REDLPEGTIIMWLEAYDPDVGQSSQVRYSLLDHGEGHFDVDKLSGAVRIVQQLDFEKK 995

Query: 210  STIQLVVVATDTGNP 224
                L V A D G P
Sbjct: 996  QLYNLTVRAKDKGKP 1010



 Score = 45.8 bits (107), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 55/195 (28%), Positives = 91/195 (46%), Gaps = 25/195 (12%)

Query: 47   KNEYSVSALEN-LPVNYVLLTVTTNKPRDLR----VKYWLSNDYGERFSIS-RQGDISLM 100
            K  YS +  E+ LP   V+    T+   D+R    + Y L     E+F ++   G++  +
Sbjct: 3029 KTSYSDTIPEDALPGKLVMQVSATDA--DIRSNAEITYTLFGSGAEKFKLNPDTGELRTL 3086

Query: 101  QCLDYETEDSYRFTVYATDTL-MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADL 159
              LD E +  Y   V ATD    +  A + +++ +VND  P F    Y + +      + 
Sbjct: 3087 ALLDREEQAVYNLLVKATDGGGRSCQAAIVLTLEDVNDNAPEFTAEPYTITV----FENT 3142

Query: 160  TPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIND-SGHISI-----VDLSALNTST 211
             PG+ + +V+A D D G   +++ SL    +  FSIN+ SG I +      +L A+ T T
Sbjct: 3143 EPGTPLTRVQATDADTGLNRKISYSLVESADGQFSINERSGIIQLEKHLDRELQAVYTLT 3202

Query: 212  IQLVVVATDTGNPPR 226
            ++    A D G P R
Sbjct: 3203 LK----AVDQGLPRR 3213



 Score = 43.9 bits (102), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 58/215 (26%), Positives = 87/215 (40%), Gaps = 19/215 (8%)

Query: 24  DRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLR---VKYW 80
           D+ A A ++V   GT+    +F++  Y  S  EN P+   +  V+   P +     V Y 
Sbjct: 443 DKRASARVVVKVLGTNSNPPEFTQTSYKASIDENAPIGAAVTRVSAMDPDEGENGYVTYS 502

Query: 81  LSNDYGERFSISR-QGDISLMQCLDYE-TEDSYRFTVYATDTLMTTSATVN----ISVVN 134
           ++N     F I    G +S  + LDYE     Y   + A+D  +     V     I++ N
Sbjct: 503 IANLNHVPFVIDHFTGTVSTSENLDYELMPRVYTLRIRASDWGLPYRREVEVLATITLNN 562

Query: 135 VNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYE-KMFSI 193
           +ND  P F     E  +P     DL  G  I  V A D D+   V   +    E  +F +
Sbjct: 563 LNDNTPLFERINCEGTIPR----DLGVGEQITTVSAIDADELQLVRYQIEAGNELDLFGL 618

Query: 194 NDSGHI-----SIVDLSALNTSTIQLVVVATDTGN 223
           N S  +     S+ D      S   L + ATD  N
Sbjct: 619 NPSSGVLSLKHSLTDGLGAKVSFHSLRITATDGEN 653



 Score = 41.6 bits (96), Expect = 0.64,   Method: Compositional matrix adjust.
 Identities = 54/193 (27%), Positives = 86/193 (44%), Gaps = 32/193 (16%)

Query: 56   ENLPVNYVLLTVTTNKP---RDLRVKYWLSNDYG-ERFSISRQGDISLMQC---LDYETE 108
            E++P    ++TV+ +     RD  ++Y + +  G   F I  +    +++    LD E+ 
Sbjct: 1046 EDVPTGSSVMTVSAHDEDTGRDGEIRYSIRDGSGIGVFRIDEETGKCVIETSDRLDREST 1105

Query: 109  DSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSV- 164
              Y  TVYATD     +++   V I V +VND  P+   P   ++ P I   + +P  V 
Sbjct: 1106 SHYWLTVYATDQGVVPLSSFIEVYIEVEDVNDNAPQTSEP---VYYPEI--MENSPKDVS 1160

Query: 165  IGKVEAADGDKGDRVTLSLRGPYEKMFSINDSGHISIVDLSALNTSTIQ----------- 213
            + ++EA D D      L+ R     + S N  G  SI   + L T+T +           
Sbjct: 1161 VVQIEAFDPDSSSNDKLTYR-----ITSGNPQGFFSIHPKTGLITTTSRKLDREQQDEHI 1215

Query: 214  LVVVATDTGNPPR 226
            L V  TD G PPR
Sbjct: 1216 LEVTVTDNGVPPR 1228



 Score = 40.8 bits (94), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 42/150 (28%), Positives = 70/150 (46%), Gaps = 13/150 (8%)

Query: 81   LSNDYGERFSISRQ-GDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWD 139
            LS +  + F I R+ G I+L     +  +  Y   V  +D +  +SA VN++V+  N   
Sbjct: 2434 LSGNDHKSFIIDRETGIITLSNLRRHTLKPFYSLNVSVSDGVFRSSARVNVTVMGGNLHS 2493

Query: 140  PRFRYPQYELFLPHIPLADLTP-GSVIGKVEAADGDKG--DRVTLSLRGPYEK-MFSIND 195
            P F   +YE     + LA+  P  +++ +V+A+D D G    VT  +   + K  F +ND
Sbjct: 2494 PVFHQNEYE-----VELAENAPLHTLVVQVKASDRDSGIYSHVTYHIVNDFAKDRFYVND 2548

Query: 196  SGHI---SIVDLSALNTSTIQLVVVATDTG 222
             G I     +D        I + ++A D G
Sbjct: 2549 RGQIFTLEKLDRETPAEKVISIRLMAKDAG 2578



 Score = 39.7 bits (91), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 47/194 (24%), Positives = 83/194 (42%), Gaps = 12/194 (6%)

Query: 12   TLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNY-VLLTVTTN 70
            TL V+A    N  R    T+ +  +  +     FS++ YSV   EN PV + VL  V T+
Sbjct: 3411 TLTVQAADNGNPPRVNTTTVNIDVSDVNDNAPLFSRDNYSVIIQENKPVGFSVLKLVVTD 3470

Query: 71   KPRDLRVKYWL----SNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDT---LMT 123
            K        +     S +    F +++ G +     +  + +D Y   V   D+    ++
Sbjct: 3471 KDSSHNGPPFFFTIVSGNDENAFEVNQHGVLLTAATIKRKVKDHYLLHVKVADSGKPQLS 3530

Query: 124  TSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSL 183
            +   ++I V+  +   P       E+F+      +   G VIGK+ A D D  D +  SL
Sbjct: 3531 SMTHIDIRVIEESIHPPAIL--PLEIFI--TAFGEEYSGGVIGKIHATDQDVYDTLMYSL 3586

Query: 184  RGPYEKMFSINDSG 197
                + +FS++ +G
Sbjct: 3587 DPHMDGLFSVSSTG 3600



 Score = 37.7 bits (86), Expect = 9.7,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 62/138 (44%), Gaps = 12/138 (8%)

Query: 103  LDYETEDSYRFTVYATDTLM---TTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLAD- 158
            LD E +D +   V  TD  +   +T A V + +++ ND  P+F    Y++ LP    AD 
Sbjct: 1206 LDREQQDEHILEVTVTDNGVPPRSTIARVIVKILDENDNRPQFLQKFYKIRLPEREKADG 1265

Query: 159  ---LTPGSVIGKVEAADGDKGDRVTLSL---RGPYEKMFSIN-DSGHISIVDLSALNTST 211
                +    + +V AAD D+G    LS     G     FSI   +G +S    SA     
Sbjct: 1266 DRSASKREPLYRVIAADKDEGPNAELSYSIEEGNEHGRFSIEPKTGVVSSKKFSAAGEYD 1325

Query: 212  IQLVVVATDTGNPPRQAS 229
            I L + A D G P + ++
Sbjct: 1326 I-LSIKAVDNGRPQKSST 1342


>gi|6688786|emb|CAB65271.1| mouse fat 1 cadherin [Mus musculus]
          Length = 4587

 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 65/218 (29%), Positives = 107/218 (49%), Gaps = 20/218 (9%)

Query: 29   ATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRD----LRVKYWLSND 84
            A + V+  G +L    F +NEY V   EN P++ +++ V  +  RD      V Y + ND
Sbjct: 2478 ARVNVTVMGGNLHSPVFHQNEYEVELAENAPLHTLVVQVKASD-RDSGIYSHVTYHIVND 2536

Query: 85   YG-ERFSISRQGDISLMQCLDYET--EDSYRFTVYATDTLMTTS-ATVNISVVNVNDWDP 140
            +  +RF ++ +G I  ++ LD ET  E      + A D     +  TVN+ + + ND  P
Sbjct: 2537 FAKDRFYVNDRGQIFTLEKLDRETPAEKVISIRLMAKDAGGKVAFCTVNVILTDDNDNAP 2596

Query: 141  RFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDR--VTLSLRGPYEKM---FSIND 195
            +FR  +YE+ +     +    G+ + KV A+D D+G    VT ++    E +     IN 
Sbjct: 2597 QFRSTKYEVNIG----SSAAKGTSVVKVFASDADEGSNADVTYAIEADSESVKENLEINK 2652

Query: 196  -SGHISIVD-LSALNTSTIQLVVVATDTGNPPRQASVP 231
             +G I+  + L  L        V A D+G+PPR++ VP
Sbjct: 2653 LTGLITTKESLIGLENEFFTFFVRAVDSGSPPRESVVP 2690



 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 42/156 (26%), Positives = 77/156 (49%), Gaps = 11/156 (7%)

Query: 33   VSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYW---LSNDYGERF 89
            +SK   S   + F ++ +S + +E+ PV +++  ++   P    +  W   +  +Y   F
Sbjct: 1348 ISKPKPSSEPISFEESVFSFTVMESDPVAHMIGVISVEPPG---MPLWFDIIGGNYDSHF 1404

Query: 90   SISR-QGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYE 148
             + +  G I + + LD E + SY  TV ATD   T    V I V++ ND  P+F   +YE
Sbjct: 1405 DVDKGTGTIIVAKPLDAEQKSSYNLTVEATDGTTTILTQVLIKVIDTNDHRPQFSTSKYE 1464

Query: 149  LFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR 184
            + +P     D  P   I ++ A D D+ +++  +L+
Sbjct: 1465 VAVPE----DTEPEVEILQISAVDRDEKNKLIYTLQ 1496



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 70/237 (29%), Positives = 106/237 (44%), Gaps = 19/237 (8%)

Query: 5    DDFLQPI-TLVVRAIQYDNQDRY-ALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNY 62
            D  LQ + TL ++A+      R  A  T++VS    +     F   EY  S  E++ +  
Sbjct: 3190 DRELQAVYTLTLKAVDQGLPRRLTATGTVVVSVLDINDNPPVFEYREYGASVSEDIVIGT 3249

Query: 63   VLLTVTTNKPRDLRVKYWLS------NDYGERFSI-SRQGDISLMQCLDYETEDSYRFTV 115
             +L V     RD+     ++      N++G +FSI S+ G I +++ LDYE+   Y  TV
Sbjct: 3250 EVLQVYAAS-RDIEANAEITYAIISGNEHG-KFSIDSKTGAIFIIESLDYESSHEYYLTV 3307

Query: 116  YATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAAD 172
             ATD     ++  ATVNI+V ++ND  P F    Y   +     A L    +    + AD
Sbjct: 3308 EATDGGTPSLSDVATVNINVTDINDNSPVFSQDTYTTVVSED--AALEQPVITIMADDAD 3365

Query: 173  GDKGDRVTLS-LRGPYEKMFSIND-SGHISIVD-LSALNTSTIQLVVVATDTGNPPR 226
            G     +  S + G     F+I+   G + +   L     S   L V A D GNPPR
Sbjct: 3366 GPSNSHIHYSIIEGNQGSPFTIDPVRGEVKVTKPLDRETISGYTLTVQAADNGNPPR 3422



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 62/244 (25%), Positives = 114/244 (46%), Gaps = 19/244 (7%)

Query: 2    INEDDFLQPITLVVRAIQYDNQDRYALA-TLIVSKAGTSLREL--QFSKNEYSVSALENL 58
            + E D  +  +  ++ +  D+ ++  L+ T IV    T + +   +F+   Y  +  E+ 
Sbjct: 2874 LKELDHEERASYQIKVVASDHGEKVQLSSTAIVGVTVTDVNDSPPRFTAEIYKGTVSEDD 2933

Query: 59   PVNYVLLTVTTNKPR----DLRVKYWLSN-DYGERFSISR-QGD--ISLMQCLDYETEDS 110
            P   V+  ++T        + +V Y+++  D   +F++   Q D  + + + LD E +DS
Sbjct: 2934 PPGGVIAILSTTDADTEEINRQVSYFITGGDALGQFAVENVQSDWRVYVKKPLDREQKDS 2993

Query: 111  YRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEA 170
            Y  TV ATD   ++ A V + V++ ND  P      Y   +P     D  PG ++ +V A
Sbjct: 2994 YLLTVTATDGTFSSKARVEVKVLDANDNSPVCEKTSYSDTIPE----DALPGKLVMQVSA 3049

Query: 171  ADGD--KGDRVTLSLRGPYEKMFSIN-DSGHI-SIVDLSALNTSTIQLVVVATDTGNPPR 226
             D D      +T +L G   + F +N D+G + ++  L     +   L+V ATD G    
Sbjct: 3050 TDADIRSNAEITYTLFGSGAEKFKLNPDTGELRTLALLDREEQAVYNLLVKATDGGGRSC 3109

Query: 227  QASV 230
            QA++
Sbjct: 3110 QAAI 3113



 Score = 55.1 bits (131), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 56/195 (28%), Positives = 96/195 (49%), Gaps = 23/195 (11%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSN-DYGERFSIS-RQGDISLMQC 102
            F K  YS    EN+ ++  ++ +  N P  L+V Y +++ D   +F+I+   G ++++  
Sbjct: 2184 FEKAFYSAEIPENIQMHSPVVHIQANSPEGLKVFYSITDGDPFSQFTINFNTGVVNVIAP 2243

Query: 103  LDYETEDSYRFTVYATDTLMTTSATVNISVV--NVNDWDPRFRYPQYELFLPHIPLADLT 160
            LD+E+  +Y+ +V ATD+L    A V + ++  ++ND  P F  P Y           L+
Sbjct: 2244 LDFESHPAYKLSVRATDSLTGAHAEVFVDIIVEDINDNPPVFVQPSYS--------TTLS 2295

Query: 161  PGSVIG----KVEAADGDK--GDRVTLSLRGPYEK---MFSIN-DSGHISIVD-LSALNT 209
              SVIG    +V A D D      ++  L G + K    F I+ ++G IS+V  L    +
Sbjct: 2296 EASVIGTPVLQVRATDSDSEPNRGISYQLIGNHSKSHDHFHIDSNTGLISLVRALDYEQS 2355

Query: 210  STIQLVVVATDTGNP 224
               ++ V A D G P
Sbjct: 2356 QQHRIFVRAVDGGMP 2370



 Score = 51.2 bits (121), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 65/247 (26%), Positives = 113/247 (45%), Gaps = 46/247 (18%)

Query: 4    EDDFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVN-- 61
            E++F    T  VRA+   +  R ++  + +      ++  +FS+  Y+ +  E+ P+   
Sbjct: 2667 ENEFF---TFFVRAVDSGSPPRESVVPVYIKILPPEVQLPRFSEPFYTYTISEDTPIGTE 2723

Query: 62   -------------YVLLTVTTNKPRDLRVKYWLSNDYGERFSISRQ-GDISLMQCLDYET 107
                         Y+L  V  N P   R ++         F I RQ G + L + LD+ET
Sbjct: 2724 IDLIRVEHGGAVLYIL--VKGNTPESNRDEF---------FVIDRQNGRLKLEKSLDHET 2772

Query: 108  EDSYRFTVYATDTL----MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGS 163
               Y+F++ A  TL    +  S  V+I V + ND  P      YE F+    + +L  GS
Sbjct: 2773 TKWYQFSILARCTLDDYEVVASIDVSIQVKDANDNSPVLESSPYEAFI----VENLPGGS 2828

Query: 164  VIGKVEAADGDKG--DRVTLSLRGPYE----KMFSIN-DSGHISIV-DLSALNTSTIQLV 215
             + ++ A+D D G   +V  SL    +    + F+IN ++G I+ + +L     ++ Q+ 
Sbjct: 2829 RVIQIRASDLDSGANGQVMYSLDQSQDADIIESFAINMETGWITTLKELDHEERASYQIK 2888

Query: 216  VVATDTG 222
            VVA+D G
Sbjct: 2889 VVASDHG 2895



 Score = 48.5 bits (114), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 58/195 (29%), Positives = 88/195 (45%), Gaps = 20/195 (10%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTTNKPRDL----RVKYWLSNDYGERFSI-SRQGDIS 98
            +F +  Y V   E+  VN  ++ V     +DL     V Y +  D  E+FSI S  G + 
Sbjct: 822  EFLQESYFVEVSEDKEVNSEIIQVEATD-KDLGPSGHVTYAILTD-TEKFSIDSMTGVVK 879

Query: 99   LMQCLDYETEDSYRFTVYATDTL-----MTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
            ++Q LD E +  +   + A D       + ++  + +S+ +VND  PRF  P Y + +  
Sbjct: 880  IIQPLDREVQPVHYLKIEARDQATEEPRLFSTVLLKVSLDDVNDNPPRFIPPNYSVKV-- 937

Query: 154  IPLADLTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSIND-SGHISIV-DLSALNT 209
                DL  G++I  +EA D D G   +V  SL    E  F ++  SG + IV  L     
Sbjct: 938  --REDLPEGTIIMWLEAYDPDVGQSSQVRYSLLDHGEGHFDVDKLSGAVRIVQQLDFEKK 995

Query: 210  STIQLVVVATDTGNP 224
                L V A D G P
Sbjct: 996  QLYNLTVRAKDKGKP 1010



 Score = 45.8 bits (107), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 55/195 (28%), Positives = 91/195 (46%), Gaps = 25/195 (12%)

Query: 47   KNEYSVSALEN-LPVNYVLLTVTTNKPRDLR----VKYWLSNDYGERFSIS-RQGDISLM 100
            K  YS +  E+ LP   V+    T+   D+R    + Y L     E+F ++   G++  +
Sbjct: 3027 KTSYSDTIPEDALPGKLVMQVSATDA--DIRSNAEITYTLFGSGAEKFKLNPDTGELRTL 3084

Query: 101  QCLDYETEDSYRFTVYATDTL-MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADL 159
              LD E +  Y   V ATD    +  A + +++ +VND  P F    Y + +      + 
Sbjct: 3085 ALLDREEQAVYNLLVKATDGGGRSCQAAIVLTLEDVNDNAPEFTAEPYTITV----FENT 3140

Query: 160  TPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIND-SGHISI-----VDLSALNTST 211
             PG+ + +V+A D D G   +++ SL    +  FSIN+ SG I +      +L A+ T T
Sbjct: 3141 EPGTPLTRVQATDADTGLNRKISYSLVESADGQFSINERSGIIQLEKHLDRELQAVYTLT 3200

Query: 212  IQLVVVATDTGNPPR 226
            ++    A D G P R
Sbjct: 3201 LK----AVDQGLPRR 3211



 Score = 43.5 bits (101), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 56/191 (29%), Positives = 85/191 (44%), Gaps = 30/191 (15%)

Query: 56   ENLPVNYVLLTVTTNKP---RDLRVKYWLSNDYG-ERFSISRQ-GDISLMQCLDYETEDS 110
            E++P    ++TV+ +     RD  ++Y + +  G   F I  + G I     LD E+   
Sbjct: 1046 EDVPTGSSVMTVSAHDEDTGRDGEIRYSIRDGSGIGVFRIDEETGVIETSDRLDRESTSH 1105

Query: 111  YRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSV-IG 166
            Y  TVYATD     +++   V I V +VND  P+   P   ++ P I   + +P  V + 
Sbjct: 1106 YWLTVYATDQGVVPLSSFIEVYIEVEDVNDNAPQTSEP---VYYPEI--MENSPKDVSVV 1160

Query: 167  KVEAADGDKGDRVTLSLRGPYEKMFSINDSGHISIVDLSALNTSTIQ-----------LV 215
            ++EA D D      L+ R     + S N  G  SI   + L T+T +           L 
Sbjct: 1161 QIEAFDPDSSSNDKLTYR-----ITSGNPQGFFSIHPKTGLITTTSRKLDREQQDEHILE 1215

Query: 216  VVATDTGNPPR 226
            V  TD G PPR
Sbjct: 1216 VTVTDNGVPPR 1226



 Score = 42.0 bits (97), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 57/215 (26%), Positives = 86/215 (40%), Gaps = 19/215 (8%)

Query: 24  DRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLR---VKYW 80
           D+ A A ++V   GT+    +F++  Y  S  EN P+   +  V+   P +     V Y 
Sbjct: 443 DKRASARVVVKVLGTNSNPPEFTQTSYKASIDENAPIGAAVTRVSAMDPDEGENGYVTYS 502

Query: 81  LSNDYGERFSISR-QGDISLMQCLDYE-TEDSYRFTVYATDTLMTTSATVN----ISVVN 134
           ++N     F I    G +S  + LDYE     Y   + A+D  +     V     I++ N
Sbjct: 503 IANLNHVPFVIDHFTGTVSTSENLDYELMPRVYTLRIRASDWGLPYRREVEVLATITLNN 562

Query: 135 VNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYE-KMFSI 193
           +ND  P F     E  +P     DL  G  I  V A D D+       +    E  +F +
Sbjct: 563 LNDNTPLFERINCEGTIPR----DLGVGEQITTVSAIDADELQLFRYQIEAGNELDLFGL 618

Query: 194 NDSGHI-----SIVDLSALNTSTIQLVVVATDTGN 223
           N S  +     S+ D      S   L + ATD  N
Sbjct: 619 NPSSGVLSLKHSLTDGLGAKVSFHSLRITATDGEN 653



 Score = 40.8 bits (94), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 42/150 (28%), Positives = 70/150 (46%), Gaps = 13/150 (8%)

Query: 81   LSNDYGERFSISRQ-GDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWD 139
            LS +  + F I R+ G I+L     +  +  Y   V  +D +  +SA VN++V+  N   
Sbjct: 2432 LSGNDHKSFIIDRETGIITLSNLRRHTLKPFYSLNVSVSDGVFRSSARVNVTVMGGNLHS 2491

Query: 140  PRFRYPQYELFLPHIPLADLTP-GSVIGKVEAADGDKG--DRVTLSLRGPYEK-MFSIND 195
            P F   +YE     + LA+  P  +++ +V+A+D D G    VT  +   + K  F +ND
Sbjct: 2492 PVFHQNEYE-----VELAENAPLHTLVVQVKASDRDSGIYSHVTYHIVNDFAKDRFYVND 2546

Query: 196  SGHI---SIVDLSALNTSTIQLVVVATDTG 222
             G I     +D        I + ++A D G
Sbjct: 2547 RGQIFTLEKLDRETPAEKVISIRLMAKDAG 2576



 Score = 39.7 bits (91), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 47/194 (24%), Positives = 83/194 (42%), Gaps = 12/194 (6%)

Query: 12   TLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNY-VLLTVTTN 70
            TL V+A    N  R    T+ +  +  +     FS++ YSV   EN PV + VL  V T+
Sbjct: 3409 TLTVQAADNGNPPRVNTTTVNIDVSDVNDNAPLFSRDNYSVIIQENKPVGFSVLKLVVTD 3468

Query: 71   KPRDLRVKYWL----SNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDT---LMT 123
            K        +     S +    F +++ G +     +  + +D Y   V   D+    ++
Sbjct: 3469 KDSSHNGPPFFFTIVSGNDENAFEVNQHGVLLTAATIKRKVKDHYFLHVKVADSGKPQLS 3528

Query: 124  TSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSL 183
            +   ++I V+  +   P       E+F+      +   G VIGK+ A D D  D +  SL
Sbjct: 3529 SMTHIDIRVIEESIHPPAIL--PLEIFI--TAFGEEYSGGVIGKIHATDQDVYDTLMYSL 3584

Query: 184  RGPYEKMFSINDSG 197
                + +FS++ +G
Sbjct: 3585 DPHMDGLFSVSSTG 3598


>gi|390460196|ref|XP_002745206.2| PREDICTED: protocadherin Fat 1 [Callithrix jacchus]
          Length = 4541

 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 66/217 (30%), Positives = 105/217 (48%), Gaps = 18/217 (8%)

Query: 29   ATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDY 85
            A + V+  G +L    F +NEY V   EN PV+ +++ V T   +      V Y + ND+
Sbjct: 2476 AQVHVTVTGGNLHSPAFLQNEYEVELAENAPVHTLVVEVKTVDGDSGIYGHVTYHIVNDF 2535

Query: 86   G-ERFSISRQGDISLMQCLDYET--EDSYRFTVYATDTLMTTS-ATVNISVVNVNDWDPR 141
              +RF I+ +G +  ++ LD ET  E      + A D     +  TVN+ + + ND  P+
Sbjct: 2536 AKDRFYINERGQVFTLEKLDRETPAEKVISVRLMAKDAGGKVAFCTVNVILTDDNDNAPQ 2595

Query: 142  FRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDR--VTLSLRGPYEKM---FSIND- 195
            FR  +YE+ +     +    G+ + KV A+D D+G    VT ++    E +     IN  
Sbjct: 2596 FRATRYEVSI----RSSAAKGTSVIKVLASDADEGSNADVTYAIEADSESVKENLEINKL 2651

Query: 196  SGHISIVD-LSALNTSTIQLVVVATDTGNPPRQASVP 231
            SG I+  + L  L        V ATD G+P R++ VP
Sbjct: 2652 SGVIATKESLIGLENEFFTFFVRATDNGSPSRESVVP 2688



 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 41/156 (26%), Positives = 76/156 (48%), Gaps = 11/156 (7%)

Query: 33   VSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWL---SNDYGERF 89
            +SK   S   L F ++ ++ + +E+ PV +++  ++   P    V  W      +Y   F
Sbjct: 1346 ISKPKPSPEPLSFEESFFTFTVMESDPVAHMIGVISVEPPG---VPLWFDITGGNYDSHF 1402

Query: 90   SISR-QGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYE 148
             + +  G + + + LD E +  Y  TV ATD   T    V I V++ ND  P+F   +YE
Sbjct: 1403 DVDKGTGTVIVAKPLDAEQKSDYNLTVEATDGTNTILTQVFIKVIDTNDHRPQFSTSKYE 1462

Query: 149  LFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR 184
            + +P     D  P + I ++ A D D+ +++  +L+
Sbjct: 1463 VVIPE----DTVPETEILQISATDQDEKNKLIYTLQ 1494



 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 63/236 (26%), Positives = 108/236 (45%), Gaps = 24/236 (10%)

Query: 4    EDDFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYV 63
            E++F    T  VRA    +  R ++  + V      L+  +FS+  Y+ +  E++P+   
Sbjct: 2665 ENEFF---TFFVRATDNGSPSRESVVPVYVKILPPELQLPKFSEPFYTYTVSEDVPIGTE 2721

Query: 64   LLTVTTNKPRDLRVKYWLSN----DYGERFSISRQ-GDISLMQCLDYETEDSYRFTVYAT 118
            +  +       +       N    +  E F I RQ G + L + LD+ET   Y+F+V A 
Sbjct: 2722 IDVIQAEHSGTVLYSLVKGNTPESNRDESFVIDRQSGRLKLEKRLDHETAKWYQFSVLAR 2781

Query: 119  ----DTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGD 174
                D  + +S  V+I V + ND  P F    YE F+    + +L  G+ + ++ A+D D
Sbjct: 2782 CTQGDYEVVSSVDVSIQVKDANDNSPVFESSPYEAFI----VENLPAGTRVIQIRASDAD 2837

Query: 175  KGD------RVTLSLRGPYEKMFSIN-DSGHISIV-DLSALNTSTIQLVVVATDTG 222
             G       R+  S      + F+IN ++G I+ + +L    T   Q+ VVA+D G
Sbjct: 2838 SGTNGQVMYRLDQSQSMEVVESFAINVETGWITTLKELDHEKTDNYQIKVVASDHG 2893



 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 55/196 (28%), Positives = 92/196 (46%), Gaps = 23/196 (11%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSN-DYGERFSIS-RQGDISLMQC 102
            F K  YS    EN+ V+  ++ V  N P  L+V Y +++ D   +F+++   G +S++  
Sbjct: 2182 FEKPFYSAGIPENIQVHSPVVHVQANSPEGLKVSYSIADGDPFSQFTVNFNTGVVSVVAP 2241

Query: 103  LDYETEDSYRFTVYATDTLMTTSATVNISVV--NVNDWDPRFRYPQYELFLPHIPLADLT 160
            LD+E   +Y+ ++ ATD+L    A V + +V  ++ND  P F    Y         A L+
Sbjct: 2242 LDFEAHPAYKLSIRATDSLTGAHAEVFVDIVVEDINDSPPVFAQQSY--------AATLS 2293

Query: 161  PGSVIG----KVEAADGDKGDRVTLS------LRGPYEKMFSINDSGHISIVD-LSALNT 209
              SV+G    +V A D D      +S      L   ++     + SG IS++  L    +
Sbjct: 2294 EASVVGTSVVQVRATDSDSEPNRGISYQMFGNLSQSHDHFHIDSSSGLISLLRTLDYEQS 2353

Query: 210  STIQLVVVATDTGNPP 225
                ++V A D G PP
Sbjct: 2354 RQHTILVRAVDGGMPP 2369



 Score = 48.1 bits (113), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 56/197 (28%), Positives = 95/197 (48%), Gaps = 21/197 (10%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDLR----VKYWL--SNDYGERFSI-SRQGDI 97
            F   EY  +  E++ V   +L V     RD+     + Y +   N++G +FS+ S+ G +
Sbjct: 3201 FEYREYGATVSEDVLVGTEVLQVYAAS-RDIEANADITYSIISGNEHG-KFSLDSKTGAV 3258

Query: 98   SLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHI 154
             ++  LDYE+   Y  TV ATD     ++  ATV+I+V ++ND  P F    Y   +   
Sbjct: 3259 FIIGNLDYESSHEYYLTVEATDGGTPSLSDVATVSINVTDINDNSPVFSQATYTAVISED 3318

Query: 155  PLADLTPGSVIGKVEAADGDKGDRVTLS-LRGPYEKMFSIND-SGHISIVDLSALNTSTI 212
             + + +  +V+   + ADG     +  S + G     F+I+   G + +  L  L+  TI
Sbjct: 3319 AVLEQSVITVMA--DDADGPLNSHIHYSIIDGNRGSSFTIDPVRGEVKVTRL--LDRETI 3374

Query: 213  Q---LVVVATDTGNPPR 226
                L V A+D G+PP+
Sbjct: 3375 SGYTLTVQASDNGSPPK 3391



 Score = 47.4 bits (111), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 34/117 (29%), Positives = 56/117 (47%), Gaps = 7/117 (5%)

Query: 90   SISRQGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYEL 149
            ++  +  + + + LD E  D+Y  T+ ATD   ++ A V + V++ ND  P      Y  
Sbjct: 2971 NVQNEWKVYVKKPLDREQRDNYLLTITATDGTFSSKAIVEVKVLDANDNSPVCEKTLYSD 3030

Query: 150  FLPHIPLADLTPGSVIGKVEAADGD--KGDRVTLSLRGPYEKMFSIN-DSGHISIVD 203
             +P     D  PG +I +V A D D      +T +L G   + F +N D+G  S +D
Sbjct: 3031 TIPE----DALPGKLIMQVSATDADIRSNAEITYTLLGSGAEKFRLNPDTGVESAID 3083



 Score = 47.0 bits (110), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 44/161 (27%), Positives = 74/161 (45%), Gaps = 12/161 (7%)

Query: 45   FSKNEYSVSALENLPVNY-VLLTVTTNKPRDLRVKYWL----SNDYGERFSISRQGDISL 99
            FS+  YSV   EN PV + VL  V T++        +     S +  + F +++QG +  
Sbjct: 3411 FSRENYSVVIQENKPVGFSVLQLVVTDRDSSHNGPPFFFAIVSGNEEKVFEVNQQGVLLT 3470

Query: 100  MQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
               +  +  D Y   V   D     +T+ A + I+V+  + + P       E+F+     
Sbjct: 3471 SAAIKRKERDHYLLQVKVADNGKPPLTSLAYIGITVIEESIYPPAIL--PLEIFI--TAF 3526

Query: 157  ADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSG 197
             +   G VIGK+ A D D  D +T SL    +K+FS++ +G
Sbjct: 3527 GEEYSGGVIGKIHATDQDVYDTLTYSLDPQMDKLFSVSSTG 3567



 Score = 45.1 bits (105), Expect = 0.058,   Method: Compositional matrix adjust.
 Identities = 56/195 (28%), Positives = 88/195 (45%), Gaps = 20/195 (10%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTTNKPRDL----RVKYWLSNDYGERFSI-SRQGDIS 98
            +F +  Y V   E+  V+  ++ V     +DL    RV Y    D  + FSI S  G + 
Sbjct: 821  EFLQESYFVEVSEDKEVHSEIIQVEATD-KDLGPNGRVTYSFLTD-TDVFSIDSTTGVVK 878

Query: 99   LMQCLDYETEDSYRFTVYATDTL-----MTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
            ++Q LD E +  +   + A D       + ++  + +S+ +VND  P+F  P Y + +  
Sbjct: 879  IVQPLDREVQPVHYLKIEARDLAREEPQLFSTVVLKVSLEDVNDNPPKFIPPNYRVKV-- 936

Query: 154  IPLADLTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSIND-SGHISIV-DLSALNT 209
                DL  G+V+  +EA+D D G   +V  SL    E  F ++  SG + IV  L     
Sbjct: 937  --REDLPEGTVVMWLEASDPDLGQSGQVRYSLMDHGEGNFDVDKLSGAVRIVQQLDFEKK 994

Query: 210  STIQLVVVATDTGNP 224
                L V A D G P
Sbjct: 995  QVYNLTVKAKDKGKP 1009



 Score = 41.6 bits (96), Expect = 0.64,   Method: Compositional matrix adjust.
 Identities = 52/191 (27%), Positives = 86/191 (45%), Gaps = 30/191 (15%)

Query: 56   ENLPVNYVLLTVTTNKP---RDLRVKYWLSNDYG-ERFSISRQ-GDISLMQCLDYETEDS 110
            E+ P+  +++TV+ +     RD  V+Y + +  G   F I  + G I     LD E+   
Sbjct: 1045 EDAPIGSLVMTVSAHDEDAGRDGEVRYSIRDGSGVGVFKIGEETGVIETSDRLDRESTSH 1104

Query: 111  YRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSV-IG 166
            Y  TV+ATD     +++   + + V +VND  P+   P   ++ P +   + +P  V + 
Sbjct: 1105 YWLTVFATDQGVVPLSSFIEIYVEVEDVNDNAPQTSEP---VYYPEV--MENSPKDVSVV 1159

Query: 167  KVEAADGDKGDRVTLSLRGPYEKMFSINDSGHISIVDLSALNTSTIQ-----------LV 215
            ++EA D D      L  R     + S N  G  SI   + L T+T +           L 
Sbjct: 1160 QIEAFDPDSSSNDRLMYR-----ITSGNPQGFFSIHPKTGLITTTSRKLDREQQDEHILE 1214

Query: 216  VVATDTGNPPR 226
            V  TD G+PP+
Sbjct: 1215 VTVTDNGSPPK 1225


>gi|350414007|ref|XP_003490178.1| PREDICTED: protocadherin-like wing polarity protein stan-like [Bombus
            impatiens]
          Length = 3163

 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 69/241 (28%), Positives = 112/241 (46%), Gaps = 20/241 (8%)

Query: 6    DFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLL 65
            D+ Q    V+     D+  R   A + V+ +  +  E  F    Y+VS  E+ P+   +L
Sbjct: 765  DYKQEKRFVLTVTASDSGGRTDTALVYVNVSDANNFEPVFENTPYAVSLFEDAPIGTTVL 824

Query: 66   TVT---TNKPRDLRVKYWLSNDYGE---RFSISRQ-GDISLMQCLDYETEDSYRFTVYAT 118
             V+   ++  ++ ++ Y L  D GE    F+I+ Q G I+  + LD E    Y  TV A 
Sbjct: 825  VVSATDSDVGKNAQITYSLGTDGGESASEFTINPQTGAITTTRTLDRELVPGYFLTVTAR 884

Query: 119  DTL---MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEA--ADG 173
            D     ++ +  V ISV +VND  P F  PQY+  +P     D+  G+ + +V A  AD 
Sbjct: 885  DGGVPPLSDTINVEISVTDVNDNAPVFESPQYQGSIPE----DVAGGTSVLRVSATDADT 940

Query: 174  DKGDRVTLSLRGPYEKMFSINDSGHISIVDLSALNTSTIQLVV---VATDTGNPPRQASV 230
            D   RV  +L    +  F+I+ S  + I     L+  ++ + +   VA D G+P     V
Sbjct: 941  DLNGRVRYALEDDGDGAFAIDSSTGV-IRTAKPLDRESVAMYILKAVAMDRGSPSLSTVV 999

Query: 231  P 231
            P
Sbjct: 1000 P 1000



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 64/229 (27%), Positives = 102/229 (44%), Gaps = 23/229 (10%)

Query: 13  LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTT--- 69
           +V+RA    +  R     L+V     +    +F  + +  S  EN+P+ Y +L +     
Sbjct: 558 IVIRAQDGGSPARSNTTQLLVHVGDVNDNAPRFYTSHFQESVSENVPIGYSMLRIQAYDA 617

Query: 70  NKPRDLRVKYWL-SNDYG----ERFSIS---RQGDISLMQCLDYETEDSYRFTVYATDTL 121
           ++  + ++KY + + D+     E F I+     G I   + LD E    Y+FTV A D+ 
Sbjct: 618 DEGANAQIKYTIGARDFSGASTENFPITVNTETGWIYTTKQLDREQCSRYQFTVIAADSG 677

Query: 122 ---MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDR 178
               + SATV ++V +VND DP F    YE  +      D  PG+ +  V A D D+  R
Sbjct: 678 EVPKSASATVILTVTDVNDNDPYFDPKNYEAVVSE----DDPPGTPVTSVTATDPDEDAR 733

Query: 179 VTLSL-RGPYEKMFSI---NDSGHISIVD-LSALNTSTIQLVVVATDTG 222
           +   +  G     FSI   N  G I++   L         L V A+D+G
Sbjct: 734 IHYEITAGNTRGRFSIASQNGRGLITVAQPLDYKQEKRFVLTVTASDSG 782



 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 62/232 (26%), Positives = 105/232 (45%), Gaps = 27/232 (11%)

Query: 25  RYALATLIVSKAGTSLRELQFSKNEYSVSALENL-----PVNYVLLTVTTNKPRDLRVKY 79
           + A ATL+V     +    QF++  YS    E+L     PV   +     +   +  V+Y
Sbjct: 463 KSANATLVVRVLDDNDNYPQFTERTYSAWIPEDLDYTANPVIARIRATDADSGNNAAVRY 522

Query: 80  WL-SNDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVN 134
            +   +    FSI S  GD++L++ LDYE+  SY+  + A D      + +  + + V +
Sbjct: 523 AIIGGNTQNTFSIDSMIGDVALVKPLDYESTRSYKIVIRAQDGGSPARSNTTQLLVHVGD 582

Query: 135 VNDWDPRFRYPQY-ELFLPHIPLADLTPGSVIGKVEAADGDKGD----RVTLSLR---GP 186
           VND  PRF    + E    ++P+     G  + +++A D D+G     + T+  R   G 
Sbjct: 583 VNDNAPRFYTSHFQESVSENVPI-----GYSMLRIQAYDADEGANAQIKYTIGARDFSGA 637

Query: 187 YEKMFSI---NDSGHI-SIVDLSALNTSTIQLVVVATDTGNPPRQASVPAIM 234
             + F I    ++G I +   L     S  Q  V+A D+G  P+ AS   I+
Sbjct: 638 STENFPITVNTETGWIYTTKQLDREQCSRYQFTVIAADSGEVPKSASATVIL 689



 Score = 45.8 bits (107), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 58/236 (24%), Positives = 101/236 (42%), Gaps = 27/236 (11%)

Query: 25  RYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWL 81
           R    TL V+   T+     F   E   S  E +PV   ++TV     +  R+  V+Y +
Sbjct: 346 RTGTTTLQVNVLDTNDHAPTFEWPEDEASIREGVPVGSTVVTVKATDQDTGRNAEVEYSI 405

Query: 82  ----------SNDYGERFSIS-RQGDISLMQCLDYETEDSYRFTVYATD------TLMTT 124
                     + D    F I  R G ++    LD E  + Y   +  +D         + 
Sbjct: 406 LSTTSGSGVANADDALTFRIDPRTGVVTTRTPLDREKTEVYTVILSVSDQATPPSARKSA 465

Query: 125 SATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS-- 182
           +AT+ + V++ ND  P+F    Y  ++P     D T   VI ++ A D D G+   +   
Sbjct: 466 NATLVVRVLDDNDNYPQFTERTYSAWIPED--LDYTANPVIARIRATDADSGNNAAVRYA 523

Query: 183 -LRGPYEKMFSINDS-GHISIVD-LSALNTSTIQLVVVATDTGNPPRQASVPAIMH 235
            + G  +  FSI+   G +++V  L   +T + ++V+ A D G+P R  +   ++H
Sbjct: 524 IIGGNTQNTFSIDSMIGDVALVKPLDYESTRSYKIVIRAQDGGSPARSNTTQLLVH 579



 Score = 38.5 bits (88), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 43/140 (30%), Positives = 67/140 (47%), Gaps = 13/140 (9%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVT-TNKPRDL--RVKYWLSNDYGERFSI-SRQGDISLM 100
            F   +Y  S  E++     +L V+ T+   DL  RV+Y L +D    F+I S  G I   
Sbjct: 911  FESPQYQGSIPEDVAGGTSVLRVSATDADTDLNGRVRYALEDDGDGAFAIDSSTGVIRTA 970

Query: 101  QCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLA 157
            + LD E+   Y     A D     ++T   V I + +VND  P F   +  L+     +A
Sbjct: 971  KPLDRESVAMYILKAVAMDRGSPSLSTVVPVTIKIQDVNDSPPAFENDKIVLY-----IA 1025

Query: 158  DLTP-GSVIGKVEAADGDKG 176
            + +P GS +G++ A D D+G
Sbjct: 1026 ENSPIGSTVGEIYAHDPDEG 1045


>gi|444730147|gb|ELW70541.1| Protocadherin-7 [Tupaia chinensis]
          Length = 1013

 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 62/203 (30%), Positives = 92/203 (45%), Gaps = 21/203 (10%)

Query: 37  GTSLRELQFSKNEYSVSALENLPVNYV--LLTVTTNKPRDLRVKYWLSNDYGERFSIS-R 93
           G S+ E+ F +N        N+P   V  +L    +  ++  + Y L +     F+I   
Sbjct: 490 GQSVVEVYFPEN--------NIPGERVATVLATDADSGKNAEIAYSLDSGVMGIFAIDPD 541

Query: 94  QGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELF 150
            GDI +   LD E  D Y F V A D    ++  S TV + V + ND DP+F    +  +
Sbjct: 542 SGDILVNTVLDREQTDRYEFKVNAKDKGIPVLQGSTTVIVQVADKNDNDPKFMQDVFTFY 601

Query: 151 LPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSI-NDSGHI-SIVDLSAL 207
           +      +L P S +G V   D DKG    +SL       +FSI ND+G I S +     
Sbjct: 602 VKE----NLQPNSPVGMVTVMDADKGRNAEMSLYIEENSNIFSIENDTGTIYSTMSFDRE 657

Query: 208 NTSTIQLVVVATDTGNPPRQASV 230
           + +T    V A D G+PPR A+ 
Sbjct: 658 HQTTYTFRVKAVDGGDPPRSATA 680



 Score = 46.2 bits (108), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 78/318 (24%), Positives = 136/318 (42%), Gaps = 50/318 (15%)

Query: 30  TLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVT---TNKPRDLRVKYWLSNDYG 86
           T+IV  A  +  + +F ++ ++    ENL  N  +  VT    +K R+  +  ++  +  
Sbjct: 578 TVIVQVADKNDNDPKFMQDVFTFYVKENLQPNSPVGMVTVMDADKGRNAEMSLYIEEN-S 636

Query: 87  ERFSISRQ-GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRF 142
             FSI    G I      D E + +Y F V A D      + +ATV++ V++ ND  P  
Sbjct: 637 NIFSIENDTGTIYSTMSFDREHQTTYTFRVKAVDGGDPPRSATATVSLFVMDENDNAPTV 696

Query: 143 RYPQ---YELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-D 195
             P+   Y L  P   +      +V+  V A D D G    L+   + G   K+F I+  
Sbjct: 697 SLPRNVSYTLLPPSSNVR-----TVVATVLATDSDDGINADLNYSIVGGNPFKLFEIDPT 751

Query: 196 SGHISIV-DLSALNTSTIQLVVVATDTGNPPRQASVPAIMH------------FPEAIVQ 242
           SG +S+V  L+  +    +LV+   D+G P +  S  A++H                IV+
Sbjct: 752 SGVVSLVGKLTQKHYGLHRLVIQVNDSGQPSQ--STTALVHVFVNESVSNATVIDSQIVR 809

Query: 243 QASSKLNSG---------TSSTVLIILGVVLIVLGFVIILLILYIHKNKHTKN-NGPPGS 292
              + L            +   + I++GVV  ++  ++I+LI+ + +   +KN NG    
Sbjct: 810 SLHTPLTQDIAGDPSYEISKQRLSIVIGVVAGIMTVILIILIVMMARYCRSKNKNGYEAG 869

Query: 293 SHSKNDSFLSNVILPEKH 310
                D F      P++H
Sbjct: 870 KKDHEDFF-----TPQQH 882


>gi|51345990|gb|AAU01514.1| protocadherin 7c [Rattus norvegicus]
          Length = 1255

 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 62/203 (30%), Positives = 92/203 (45%), Gaps = 21/203 (10%)

Query: 37  GTSLRELQFSKNEYSVSALENLPVNYV--LLTVTTNKPRDLRVKYWLSNDYGERFSIS-R 93
           G S+ E+ F +N        N+P   V  +L    +  ++  + Y L +     F+I   
Sbjct: 536 GQSVVEVYFPEN--------NIPGERVATVLATDADSGKNAEIAYSLDSSVMGTFAIDPD 587

Query: 94  QGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELF 150
            GDI +   LD E  D Y F V A D    ++  S TV + V + ND DP+F    +  +
Sbjct: 588 SGDILVNTVLDREQTDRYEFKVNAKDKGIPVLQGSTTVIVQVADKNDNDPKFMQDVFTFY 647

Query: 151 LPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSI-NDSGHI-SIVDLSAL 207
           +      +L P S +G V   D DKG    +SL       +FSI ND+G I S +     
Sbjct: 648 VKE----NLQPNSPVGMVTVMDADKGRNAEMSLYIEENSNIFSIENDTGTIYSTMSFDRE 703

Query: 208 NTSTIQLVVVATDTGNPPRQASV 230
           + +T    V A D G+PPR A+ 
Sbjct: 704 HQTTYTFRVKAVDGGDPPRSATA 726



 Score = 41.2 bits (95), Expect = 0.85,   Method: Compositional matrix adjust.
 Identities = 40/150 (26%), Positives = 68/150 (45%), Gaps = 26/150 (17%)

Query: 93  RQGDISLMQCLDYETEDSYRFTVY---ATDTLMTTSATVNISVVNVNDWDPRFRYPQYEL 149
           +Q  + +   LD E  DSY  T+      D   ++ A + + + +VND  PRF    YE 
Sbjct: 256 KQPQLIVKGALDREQRDSYELTLRVRDGGDPPRSSQAILRVLITDVNDNSPRFEKSVYEA 315

Query: 150 FLPHIPLADLTPGSVIGKVEAADGDKG---------DRVTLSLRGPYEKMFSIND-SGHI 199
            L      +  PG+ I ++ A D D G            T S+R    ++  +++ SG +
Sbjct: 316 DLAE----NSAPGTPILQLRATDLDVGVNGQIEYVFGAATESVR----RLLRLDETSGWL 367

Query: 200 SI---VDLSALNTSTIQLVVVATDTGNPPR 226
           S+   +D   +N   ++  V+A D G PP+
Sbjct: 368 SVLHRIDREEVN--QLRFTVMARDRGQPPK 395


>gi|347543911|gb|AEP02528.1| CDH23, partial [Hipposideros armiger]
          Length = 3209

 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 59/194 (30%), Positives = 84/194 (43%), Gaps = 18/194 (9%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDLR---VKYWLSNDYGERFSIS-RQGDISLM 100
            F +  Y  +  E++PV  V+L VT           ++Y L N  G +FSI+   GDI ++
Sbjct: 2392 FDQPSYQEAIFEDVPVGTVILRVTATDADSGNYAVIEYGLGNGEG-KFSINPTTGDIYVL 2450

Query: 101  QCLDYETEDSYRFTVYATD-------TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
              LD E +D Y  T  A D            S  V I V++VND  P F  PQY   +  
Sbjct: 2451 SSLDREKKDHYILTAIAKDNPGDIASNRRENSVQVVIQVLDVNDCRPEFSKPQYSTSV-- 2508

Query: 154  IPLADLTPGSVIGKVEAADGDKGDRVTL--SLRGPYEKMFSINDSGHISIVDLSALNTST 211
                +   G+ +  + A D D+G    L  SL GP  + F ++    +        +   
Sbjct: 2509 --YENEPAGTSVITMMATDQDEGSNAELAYSLEGPGMEAFHVDKDSGLVTTQRPLRSYER 2566

Query: 212  IQLVVVATDTGNPP 225
              L VVATD G PP
Sbjct: 2567 FNLTVVATDGGEPP 2580



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 65/207 (31%), Positives = 96/207 (46%), Gaps = 22/207 (10%)

Query: 45  FSKNEYSVSALENLPVNYVLLTV--TTNKPRDL-RVKYWLSNDYGERFSISRQ-GDISLM 100
           FS+  Y+VS  EN+ V   +LTV  T N       V Y+ S D  +RFS+ +  G I L+
Sbjct: 450 FSQPLYNVSLYENVTVGTSVLTVLATDNDAGTFGEVNYYFS-DNADRFSLDKDTGLILLI 508

Query: 101 QCLDYETEDSYRFTVYATDTL-MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADL 159
             LDYE    +  TV A D     T+  V I+V++VND  P F+   Y        L + 
Sbjct: 509 AKLDYELIQRFTLTVIARDGGGEETTGRVRINVLDVNDNVPTFQKDAY-----MGALREN 563

Query: 160 TPG-SVIGKVEAADGDK--GDRVTLSL-----RGPYEKMFSINDSGHISI---VDLSALN 208
            P  + + ++ A D D    + +T S+      G Y  +      G IS+   +D   + 
Sbjct: 564 EPSVTQLVRLRATDEDSPPNNLITYSIVFASSFGSYFDISVYEGYGVISVNHPLDYEQIP 623

Query: 209 TSTIQLVVVATDTGNPPRQASVPAIMH 235
              I L V+A D GNPP  ++VP  + 
Sbjct: 624 NGMIYLTVMAKDAGNPPLNSTVPVTIE 650



 Score = 51.2 bits (121), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 60/204 (29%), Positives = 98/204 (48%), Gaps = 25/204 (12%)

Query: 43   LQFSKNEYSVSALENLPVNYVLLTVTTNKPRDL-----RVKYWLSNDYGERFSI-SRQGD 96
            +QFS   Y ++ LENL +   ++ V    P ++     R   + S      F I S  G 
Sbjct: 1301 VQFSNASYEIAILENLALGTEIVRVQAYSPDNINPITYRFDTYTSAQAKGLFKIDSFTGV 1360

Query: 97   ISLMQCLDYETEDSYRFTVYATD--TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHI 154
            I++   +D E  D +  TV A D  + + ++A V I+V++ ND  PRF  P  +  +  +
Sbjct: 1361 ITVKGLVDREKSDFHTLTVVADDGGSKVDSTAKVYITVLDENDNSPRFD-PTSDSMI-SV 1418

Query: 155  PLADLTPGSVIGKVEAADGDKGD--RVTLSLR-----GPYEKMFSINDS-GHISI---VD 203
            P  D   G  +  V+A D D G   +V  SL      G +E + + NDS G + +   +D
Sbjct: 1419 P-EDCPVGQRVATVKAHDPDAGSNGQVVFSLASGNIAGAFE-IVTTNDSVGEVFVAKPLD 1476

Query: 204  LSALNTSTIQLVVVATDTGNPPRQ 227
               L+   ++  +VA+D G PPR+
Sbjct: 1477 REELDHYILK--IVASDCGTPPRK 1498



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 47/141 (33%), Positives = 66/141 (46%), Gaps = 15/141 (10%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDY---GERFSI-SRQGDISLM 100
           F    YSV   E+ PV   +  V    P DL     +   +    E F+I S +G ++++
Sbjct: 124 FHNQPYSVRIPEDTPVGTPIFIVNATDP-DLGAGGSVLYSFQPPSEFFAIDSARGIVTVI 182

Query: 101 QCLDYETEDSYRFTVYATDT----LMTTSATVNISVVNVNDWDPRF-RYPQYELFLPHIP 155
           Q LDYET  SY+ TV ATD      ++T A + I + +V D DP F   P       H P
Sbjct: 183 QELDYETTQSYQLTVNATDQDKTRPLSTLANLAIIITDVQDMDPIFVNLPYSTNIYEHSP 242

Query: 156 LADLTPGSVIGKVEAADGDKG 176
                PG+ +  + A D DKG
Sbjct: 243 -----PGTTVRVITAIDQDKG 258



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 63/210 (30%), Positives = 94/210 (44%), Gaps = 28/210 (13%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRDLR------VKYWLSNDYGERFSISRQGDIS 98
           FSK  Y+VS +E++     +L V        R      + Y L      R S SR G+I+
Sbjct: 661 FSKPAYTVSVVESIMAGATVLFVNATDLDGSREYGQESIIYSLEGSSQFRIS-SRSGEIT 719

Query: 99  LMQCLDYETEDSYRFTVYATD-----TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
               LD ET+  Y   V A D        T  ATVNI+++++ND  P ++   Y     +
Sbjct: 720 TSTLLDRETKAEYILIVRAVDGGVGHNQKTGIATVNITLLDINDNHPTWKDAPY-----Y 774

Query: 154 IPLADLT-PGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSIND-SGHIS----IVDLSA 206
           I L ++T P S +  V A D D G+  TL     P  K +S+N  +G I     ++D   
Sbjct: 775 INLVEMTPPDSDVTTVVAVDPDLGENGTLVYSIDPPNKFYSLNSTTGKIRTTHVMLDREN 834

Query: 207 LNTSTIQL----VVVATDTGNPPRQASVPA 232
            +    +L    +V   D G PP +A+  A
Sbjct: 835 PDPHEAELMRKIIVSVRDCGRPPLKATSSA 864



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 53/161 (32%), Positives = 75/161 (46%), Gaps = 33/161 (20%)

Query: 65   LTVTTNKPRDLRVKYWLS---NDYG---------------ERFSIS-RQGDISLMQCLDY 105
            ++V+ + PRD RV  WL+   ND G                +FS+  R   +  +  LD 
Sbjct: 992  VSVSEDVPRDFRV-VWLNCTDNDIGLNAELSYFITGGNVDGKFSVGYRDAVVRTVVGLDR 1050

Query: 106  ETEDSYRFTVYATDT-----LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLT 160
            ET  SY   + A D        T +ATV I+V++VND  P F    YE  +P     D+ 
Sbjct: 1051 ETTASYTLILEAIDNGPVGKRRTGTATVFITVLDVNDNRPIFLQSSYEASVPE----DIP 1106

Query: 161  PGSVIGKVEAADGDKGD--RVTLS-LRGPYEKMFSIN-DSG 197
             G  I ++ A D D+G+  RV    L+G Y   F I+ DSG
Sbjct: 1107 EGHSIVQLTATDADEGEFGRVWYRILQGNYGNFFEIDVDSG 1147



 Score = 44.3 bits (103), Expect = 0.095,   Method: Compositional matrix adjust.
 Identities = 53/197 (26%), Positives = 88/197 (44%), Gaps = 24/197 (12%)

Query: 44  QFSKNEYSVSALENLPVNYVL----LTVTTNKPRDLRVKYWLSNDYGERF-----SISRQ 94
           +F+ +EYSV+  E   V + L      V  ++  +   + +L  +    F     S+  +
Sbjct: 339 EFNSSEYSVAITELAQVGFALPLFIQVVDKDEGLNSMFEVYLVGNNSHHFIISPTSVQGK 398

Query: 95  GDISLMQC--LDYETEDSYRFTVYATDTL--MTTSATVNISVVNVNDWDPRFRYPQYELF 150
            DI +     LDYET D Y F ++A +++      A V I+++N ND  P F  P Y + 
Sbjct: 399 ADIRIRVAIPLDYETVDRYDFDLFANESVPDHVGYAKVKITLINENDNRPIFSQPLYNVS 458

Query: 151 LPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDSGHISIVDLSALN 208
           L      ++T G+ +  V A D D G    V        ++     D+G I ++  + L+
Sbjct: 459 L----YENVTVGTSVLTVLATDNDAGTFGEVNYYFSDNADRFSLDKDTGLILLI--AKLD 512

Query: 209 TSTIQ---LVVVATDTG 222
              IQ   L V+A D G
Sbjct: 513 YELIQRFTLTVIARDGG 529



 Score = 42.4 bits (98), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 34/107 (31%), Positives = 50/107 (46%), Gaps = 8/107 (7%)

Query: 92   SRQGDISLMQCLDYETEDSYRFTVYATDTLMTTSAT---VNISVVNVNDWDPRFRYPQYE 148
            S  G +   + +DYE      FTV A+D      A    V + +V++ND +P F  P Y+
Sbjct: 2339 SSAGKVIANRTVDYEEVHWLNFTVRASDNGSPPRAAEIPVYLEIVDINDNNPIFDQPSYQ 2398

Query: 149  LFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSIN 194
              +      D+  G+VI +V A D D G+   +    G  E  FSIN
Sbjct: 2399 EAI----FEDVPVGTVILRVTATDADSGNYAVIEYGLGNGEGKFSIN 2441



 Score = 39.3 bits (90), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 43/130 (33%), Positives = 57/130 (43%), Gaps = 9/130 (6%)

Query: 95  GDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHI 154
           G + L Q LD ET   +      +D     +  VNI V +VND  P F    Y + +P  
Sbjct: 77  GVVWLRQPLDRETVSEFIVEFSVSDHQGVITRKVNIQVGDVNDNAPTFHNQPYSVRIPE- 135

Query: 155 PLADLTPGSVIGKVEAADGD--KGDRVTLSLRGPYEKMFSINDSGHISIV--DLSALNTS 210
              D   G+ I  V A D D   G  V  S + P E  F+I+ +  I  V  +L    T 
Sbjct: 136 ---DTPVGTPIFIVNATDPDLGAGGSVLYSFQPPSE-FFAIDSARGIVTVIQELDYETTQ 191

Query: 211 TIQLVVVATD 220
           + QL V ATD
Sbjct: 192 SYQLTVNATD 201


>gi|148705744|gb|EDL37691.1| protocadherin 7, isoform CRA_c [Mus musculus]
          Length = 1247

 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 62/203 (30%), Positives = 92/203 (45%), Gaps = 21/203 (10%)

Query: 37  GTSLRELQFSKNEYSVSALENLPVNYV--LLTVTTNKPRDLRVKYWLSNDYGERFSIS-R 93
           G S+ E+ F +N        N+P   V  +L    +  ++  + Y L +     F+I   
Sbjct: 536 GQSVVEVYFPEN--------NIPGERVATVLATDADSGKNAEIAYSLDSSVMGTFAIDPD 587

Query: 94  QGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELF 150
            GDI +   LD E  D Y F V A D    ++  S TV + V + ND DP+F    +  +
Sbjct: 588 SGDILVNTVLDREQTDRYEFKVNAKDKGIPVLQGSTTVIVQVADKNDNDPKFMQDVFTFY 647

Query: 151 LPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSI-NDSGHI-SIVDLSAL 207
           +      +L P S +G V   D DKG    +SL       +FSI ND+G I S +     
Sbjct: 648 VKE----NLQPNSPVGMVTVMDADKGRNAEMSLYIEENSNIFSIENDTGTIYSTMSFDRE 703

Query: 208 NTSTIQLVVVATDTGNPPRQASV 230
           + +T    V A D G+PPR A+ 
Sbjct: 704 HQTTYTFRVKAVDGGDPPRSATA 726



 Score = 45.1 bits (105), Expect = 0.067,   Method: Compositional matrix adjust.
 Identities = 78/316 (24%), Positives = 133/316 (42%), Gaps = 46/316 (14%)

Query: 30  TLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVT---TNKPRDLRVKYWLSNDYG 86
           T+IV  A  +  + +F ++ ++    ENL  N  +  VT    +K R+  +  ++  +  
Sbjct: 624 TVIVQVADKNDNDPKFMQDVFTFYVKENLQPNSPVGMVTVMDADKGRNAEMSLYIEEN-S 682

Query: 87  ERFSISRQ-GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRF 142
             FSI    G I      D E + +Y F V A D      + +ATV++ V++ ND  P  
Sbjct: 683 NIFSIENDTGTIYSTMSFDREHQTTYTFRVKAVDGGDPPRSATATVSLFVMDENDNAPTV 742

Query: 143 RYPQ---YELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIND- 195
             P+   Y L  P   +      +V+  V A D D G    L+   + G   K+F I+  
Sbjct: 743 TLPRNISYTLLPPSSNVR-----TVVATVLATDSDDGINADLNYSIVGGNPFKLFEIDST 797

Query: 196 SGHISIV-DLSALNTSTIQLVVVATDTGNPPRQA----------SVPAIMHFPEAIVQQA 244
           SG +S+V  L+  +    +LVV   D+G P +            SV         IV+  
Sbjct: 798 SGVVSLVGKLTQKHYGLHRLVVQVNDSGQPSQSTTTLVHVFVNESVSNATVIDSQIVRSL 857

Query: 245 SSKLNSG---------TSSTVLIILGVVLIVLGFVIILLILYIHKNKHTKN-NGPPGSSH 294
            + L            +   + I++GVV  ++  ++I+LI+ + +   +KN NG      
Sbjct: 858 HTPLTQDIAGDPSYEISKQRLSIVIGVVAGIMTVILIILIVMMARYCRSKNKNGYEAGKK 917

Query: 295 SKNDSFLSNVILPEKH 310
              D F      P++H
Sbjct: 918 DHEDFF-----TPQQH 928



 Score = 41.2 bits (95), Expect = 0.84,   Method: Compositional matrix adjust.
 Identities = 40/150 (26%), Positives = 68/150 (45%), Gaps = 26/150 (17%)

Query: 93  RQGDISLMQCLDYETEDSYRFTVY---ATDTLMTTSATVNISVVNVNDWDPRFRYPQYEL 149
           +Q  + +   LD E  DSY  T+      D   ++ A + + + +VND  PRF    YE 
Sbjct: 256 KQPQLIVKGALDREQRDSYELTLRVRDGGDPPRSSQAILRVLITDVNDNSPRFEKSVYEA 315

Query: 150 FLPHIPLADLTPGSVIGKVEAADGDKG---------DRVTLSLRGPYEKMFSIND-SGHI 199
            L      +  PG+ I ++ A D D G            T S+R    ++  +++ SG +
Sbjct: 316 DLAE----NSAPGTPILQLRATDLDVGVNGQIEYVFGAATESVR----RLLRLDETSGWL 367

Query: 200 SI---VDLSALNTSTIQLVVVATDTGNPPR 226
           S+   +D   +N   ++  V+A D G PP+
Sbjct: 368 SVLHRIDREEVN--QLRFTVMARDRGQPPK 395


>gi|119576776|gb|EAW56372.1| cadherin, EGF LAG seven-pass G-type receptor 2 (flamingo homolog,
           Drosophila) [Homo sapiens]
          Length = 2924

 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 70/219 (31%), Positives = 102/219 (46%), Gaps = 22/219 (10%)

Query: 25  RYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWL 81
           R ALATL +    T+  +  F + EY  S  ENL V Y +LTV     + P +  + Y L
Sbjct: 270 RSALATLTILVTDTNDHDPVFEQQEYKESLRENLEVGYEVLTVRATDGDAPPNANILYRL 329

Query: 82  SNDYG----ERFSIS-RQGDISLMQCLDYETEDSYRFTVYATDT-----LMTTSATVNIS 131
               G    E F I  R G I     +D E  +SY+ TV A+D        +T+A V +S
Sbjct: 330 LEGSGGSPSEVFEIDPRSGVIRTRGPVDREEVESYQLTVEASDQGRDPGPRSTTAAVFLS 389

Query: 132 VVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYE 188
           V + ND  P+F   +Y + +      D+TPG+ + +V A+D DKG    +    + G   
Sbjct: 390 VEDDNDNAPQFSEKRYVVQV----REDVTPGAPVLRVTASDRDKGSNAVVHYSIMSGNAR 445

Query: 189 KMFSIN-DSGHISIVD-LSALNTSTIQLVVVATDTGNPP 225
             F ++  +G + +V  L    T    L V A D G PP
Sbjct: 446 GQFYLDAQTGALDVVSPLDYETTKEYTLRVRAQDGGRPP 484



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 50/171 (29%), Positives = 80/171 (46%), Gaps = 15/171 (8%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGERFSIS---RQGDIS 98
           F    +  + LE++P+ Y++L V     +   + R++Y L+   G  F  +     G IS
Sbjct: 506 FVSTPFQATVLESVPLGYLVLHVQAIDADAGDNARLEYRLAG-VGHDFPFTINNGTGWIS 564

Query: 99  LMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIP 155
           +   LD E  D Y F V A D     +T SA+V+++V++VND +P F  P+Y + L    
Sbjct: 565 VAAELDREEVDFYSFGVEARDHGTPALTASASVSVTVLDVNDNNPTFTQPEYTVRLNE-- 622

Query: 156 LADLTPGSVIGKVEAADGDKGDRVTLSL-RGPYEKMFSINDSGHISIVDLS 205
             D   G+ +  V A D D    +T  +  G     FSI       +V L+
Sbjct: 623 --DAAVGTSVVTVSAVDRDAHSVITYQITSGNTRNRFSITSQSGGGLVSLA 671



 Score = 44.7 bits (104), Expect = 0.075,   Method: Compositional matrix adjust.
 Identities = 50/189 (26%), Positives = 86/189 (45%), Gaps = 14/189 (7%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRDLR--VKYWL-SNDYGERFSISRQ---GDIS 98
           F++ EY+V   E+  V   ++TV+    RD    + Y + S +   RFSI+ Q   G +S
Sbjct: 611 FTQPEYTVRLNEDAAVGTSVVTVSAVD-RDAHSVITYQITSGNTRNRFSITSQSGGGLVS 669

Query: 99  LMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLAD 158
           L   LDY+ E  Y   V A+D     +A + ++V + N   P F+   Y + +      D
Sbjct: 670 LALPLDYKLERQYVLAVTASDGTRQDTAQIVVNVTDANTHRPVFQSSHYTVNVNE----D 725

Query: 159 LTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSINDSGHISI-VDLSALNTSTIQLV 215
              G+ +  + A D D G+  R+T  +     +     D+G ++   +L   +  +  L 
Sbjct: 726 RPAGTTVVLISATDEDTGENARITYFMEDSIPQFRIDADTGAVTTQAELDYEDQVSYTLA 785

Query: 216 VVATDTGNP 224
           + A D G P
Sbjct: 786 ITARDNGIP 794



 Score = 44.7 bits (104), Expect = 0.081,   Method: Compositional matrix adjust.
 Identities = 40/149 (26%), Positives = 69/149 (46%), Gaps = 10/149 (6%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWL-SNDYGERFSIS-RQGDISL 99
            F ++E+ V   EN P+   +  VT   P +    ++ Y +   +  E F +    G+++ 
Sbjct: 922  FEQDEFDVFVEENSPIGLAVARVTATDPDEGTNAQIMYQIVEGNIPEVFQLDIFSGELTA 981

Query: 100  MQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPH--IPLA 157
            +  LDYE    Y   + AT   + + ATV++ +++ ND  P      +E+   +     +
Sbjct: 982  LVDLDYEDRPEYVLVIQATSAPLVSRATVHVRLLDRNDNPPVLG--NFEILFNNYVTNRS 1039

Query: 158  DLTPGSVIGKVEAADGDKGDRVTLSL-RG 185
               PG  IG+V A D D  D +T S  RG
Sbjct: 1040 SSFPGGAIGRVPAHDPDISDSLTYSFERG 1068


>gi|13325064|ref|NP_001399.1| cadherin EGF LAG seven-pass G-type receptor 2 precursor [Homo
           sapiens]
 gi|22095550|sp|Q9HCU4.1|CELR2_HUMAN RecName: Full=Cadherin EGF LAG seven-pass G-type receptor 2;
           AltName: Full=Cadherin family member 10; AltName:
           Full=Epidermal growth factor-like protein 2;
           Short=EGF-like protein 2; AltName: Full=Flamingo homolog
           3; AltName: Full=Multiple epidermal growth factor-like
           domains protein 3; Short=Multiple EGF-like domains
           protein 3; Flags: Precursor
 gi|9828190|gb|AAG00080.1|AF234887_1 FLAMINGO 1 [Homo sapiens]
 gi|21929188|dbj|BAC06168.1| seven transmembrane helix receptor [Homo sapiens]
          Length = 2923

 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 70/219 (31%), Positives = 102/219 (46%), Gaps = 22/219 (10%)

Query: 25  RYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWL 81
           R ALATL +    T+  +  F + EY  S  ENL V Y +LTV     + P +  + Y L
Sbjct: 269 RSALATLTILVTDTNDHDPVFEQQEYKESLRENLEVGYEVLTVRATDGDAPPNANILYRL 328

Query: 82  SNDYG----ERFSIS-RQGDISLMQCLDYETEDSYRFTVYATDT-----LMTTSATVNIS 131
               G    E F I  R G I     +D E  +SY+ TV A+D        +T+A V +S
Sbjct: 329 LEGSGGSPSEVFEIDPRSGVIRTRGPVDREEVESYQLTVEASDQGRDPGPRSTTAAVFLS 388

Query: 132 VVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYE 188
           V + ND  P+F   +Y + +      D+TPG+ + +V A+D DKG    +    + G   
Sbjct: 389 VEDDNDNAPQFSEKRYVVQV----REDVTPGAPVLRVTASDRDKGSNAVVHYSIMSGNAR 444

Query: 189 KMFSIN-DSGHISIVD-LSALNTSTIQLVVVATDTGNPP 225
             F ++  +G + +V  L    T    L V A D G PP
Sbjct: 445 GQFYLDAQTGALDVVSPLDYETTKEYTLRVRAQDGGRPP 483



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 50/171 (29%), Positives = 80/171 (46%), Gaps = 15/171 (8%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGERFSIS---RQGDIS 98
           F    +  + LE++P+ Y++L V     +   + R++Y L+   G  F  +     G IS
Sbjct: 505 FVSTPFQATVLESVPLGYLVLHVQAIDADAGDNARLEYRLAG-VGHDFPFTINNGTGWIS 563

Query: 99  LMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIP 155
           +   LD E  D Y F V A D     +T SA+V+++V++VND +P F  P+Y + L    
Sbjct: 564 VAAELDREEVDFYSFGVEARDHGTPALTASASVSVTVLDVNDNNPTFTQPEYTVRLNE-- 621

Query: 156 LADLTPGSVIGKVEAADGDKGDRVTLSL-RGPYEKMFSINDSGHISIVDLS 205
             D   G+ +  V A D D    +T  +  G     FSI       +V L+
Sbjct: 622 --DAAVGTSVVTVSAVDRDAHSVITYQITSGNTRNRFSITSQSGGGLVSLA 670



 Score = 44.7 bits (104), Expect = 0.075,   Method: Compositional matrix adjust.
 Identities = 50/189 (26%), Positives = 86/189 (45%), Gaps = 14/189 (7%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRDLR--VKYWL-SNDYGERFSISRQ---GDIS 98
           F++ EY+V   E+  V   ++TV+    RD    + Y + S +   RFSI+ Q   G +S
Sbjct: 610 FTQPEYTVRLNEDAAVGTSVVTVSAVD-RDAHSVITYQITSGNTRNRFSITSQSGGGLVS 668

Query: 99  LMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLAD 158
           L   LDY+ E  Y   V A+D     +A + ++V + N   P F+   Y + +      D
Sbjct: 669 LALPLDYKLERQYVLAVTASDGTRQDTAQIVVNVTDANTHRPVFQSSHYTVNVNE----D 724

Query: 159 LTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSINDSGHISI-VDLSALNTSTIQLV 215
              G+ +  + A D D G+  R+T  +     +     D+G ++   +L   +  +  L 
Sbjct: 725 RPAGTTVVLISATDEDTGENARITYFMEDSIPQFRIDADTGAVTTQAELDYEDQVSYTLA 784

Query: 216 VVATDTGNP 224
           + A D G P
Sbjct: 785 ITARDNGIP 793



 Score = 44.7 bits (104), Expect = 0.081,   Method: Compositional matrix adjust.
 Identities = 40/149 (26%), Positives = 69/149 (46%), Gaps = 10/149 (6%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWL-SNDYGERFSIS-RQGDISL 99
            F ++E+ V   EN P+   +  VT   P +    ++ Y +   +  E F +    G+++ 
Sbjct: 921  FEQDEFDVFVEENSPIGLAVARVTATDPDEGTNAQIMYQIVEGNIPEVFQLDIFSGELTA 980

Query: 100  MQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPH--IPLA 157
            +  LDYE    Y   + AT   + + ATV++ +++ ND  P      +E+   +     +
Sbjct: 981  LVDLDYEDRPEYVLVIQATSAPLVSRATVHVRLLDRNDNPPVLG--NFEILFNNYVTNRS 1038

Query: 158  DLTPGSVIGKVEAADGDKGDRVTLSL-RG 185
               PG  IG+V A D D  D +T S  RG
Sbjct: 1039 SSFPGGAIGRVPAHDPDISDSLTYSFERG 1067


>gi|291242993|ref|XP_002741390.1| PREDICTED: protocadherin 11 X-linked-like [Saccoglossus
           kowalevskii]
          Length = 1257

 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 70/215 (32%), Positives = 102/215 (47%), Gaps = 22/215 (10%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRDL----RVKYWLSNDYGERFSISR-QGDISL 99
           FSK  Y+    EN  V   +  VT   P DL    +V+Y L N Y   F I+   G+I+ 
Sbjct: 476 FSKRVYTAQIPENNIVGAYITKVTALDP-DLDANGQVEYVLWN-YHHEFDINIITGEITA 533

Query: 100 MQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
            + LDYE    Y   V A D       + ATV + +++ ND  P F    Y   +     
Sbjct: 534 KKLLDYEERSFYNINVTACDHGTVQQCSDATVRLFILDQNDHAPFFSQNSYTFSVSE--- 590

Query: 157 ADLTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSIND-SGHI-SIVDLSALNTSTI 212
            +L P + IGK+ A+D D G+  R+  SL G + + F IN  +G + + V  +  + +  
Sbjct: 591 -NLPPDTSIGKIRASDLDTGENSRLIYSLLGEHSQQFRINHRTGDVFTQVSFNYESETQC 649

Query: 213 QLVVVATDTGNPPRQASVPAIMHFPEAIVQQASSK 247
            LVV+ TD G P R  S  A +H   AI+ Q  +K
Sbjct: 650 DLVVMVTDHGTPARTDS--ATVHV--AIIDQNDNK 680



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/140 (31%), Positives = 73/140 (52%), Gaps = 11/140 (7%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGERFSIS-RQGDISLM 100
           FS+N Y+ S  ENLP +  +  +     +   + R+ Y L  ++ ++F I+ R GD+   
Sbjct: 579 FSQNSYTFSVSENLPPDTSIGKIRASDLDTGENSRLIYSLLGEHSQQFRINHRTGDVFTQ 638

Query: 101 QCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQ-YELFLPHIPL 156
              +YE+E      V  TD      T SATV++++++ ND  P   YPQ Y +   ++PL
Sbjct: 639 VSFNYESETQCDLVVMVTDHGTPARTDSATVHVAIIDQNDNKPVIIYPQGYNII--YVPL 696

Query: 157 ADLTPGSVIGKVEAADGDKG 176
           +   PG  +  ++AAD D G
Sbjct: 697 S-AKPGLAVMTIQAADADDG 715


>gi|119613270|gb|EAW92864.1| BH-protocadherin (brain-heart), isoform CRA_d [Homo sapiens]
          Length = 1023

 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 62/203 (30%), Positives = 92/203 (45%), Gaps = 21/203 (10%)

Query: 37  GTSLRELQFSKNEYSVSALENLPVNYV--LLTVTTNKPRDLRVKYWLSNDYGERFSIS-R 93
           G S+ E+ F +N        N+P   V  +L    +  ++  + Y L +     F+I   
Sbjct: 490 GQSVVEVYFPEN--------NIPGERVATVLATDADSGKNAEIAYSLDSSVMGIFAIDPD 541

Query: 94  QGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELF 150
            GDI +   LD E  D Y F V A D    ++  S TV + V + ND DP+F    +  +
Sbjct: 542 SGDILVNTVLDREQTDRYEFKVNAKDKGIPVLQGSTTVIVQVADKNDNDPKFMQDVFTFY 601

Query: 151 LPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSI-NDSGHI-SIVDLSAL 207
           +      +L P S +G V   D DKG    +SL       +FSI ND+G I S +     
Sbjct: 602 VKE----NLQPNSPVGMVTVMDADKGRNAEMSLYIEENNNIFSIENDTGTIYSTMSFDRE 657

Query: 208 NTSTIQLVVVATDTGNPPRQASV 230
           + +T    V A D G+PPR A+ 
Sbjct: 658 HQTTYTFRVKAVDGGDPPRSATA 680



 Score = 45.8 bits (107), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 78/318 (24%), Positives = 135/318 (42%), Gaps = 50/318 (15%)

Query: 30  TLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVT---TNKPRDLRVKYWLSNDYG 86
           T+IV  A  +  + +F ++ ++    ENL  N  +  VT    +K R+  +  ++  +  
Sbjct: 578 TVIVQVADKNDNDPKFMQDVFTFYVKENLQPNSPVGMVTVMDADKGRNAEMSLYIEEN-N 636

Query: 87  ERFSISRQ-GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRF 142
             FSI    G I      D E + +Y F V A D      + +ATV++ V++ ND  P  
Sbjct: 637 NIFSIENDTGTIYSTMSFDREHQTTYTFRVKAVDGGDPPRSATATVSLFVMDENDNAPTV 696

Query: 143 RYPQ---YELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-D 195
             P+   Y L  P   +      +V+  V A D D G    L+   + G   K+F I+  
Sbjct: 697 TLPKNISYTLLPPSSNVR-----TVVATVLATDSDDGINADLNYSIVGGNPFKLFEIDPT 751

Query: 196 SGHISIV-DLSALNTSTIQLVVVATDTGNPPR--------------------QASVPAIM 234
           SG +S+V  L+  +    +LVV   D+G P +                     + +   +
Sbjct: 752 SGVVSLVGKLTQKHYGLHRLVVQVNDSGQPSQSTTTLVHVFVNESVSNATAIDSQIARSL 811

Query: 235 HFPEAIVQQASSKLNSGTSSTVL-IILGVVLIVLGFVIILLILYIHKNKHTKN-NGPPGS 292
           H P  + Q  +   +   S   L I++GVV  ++  ++I+LI+ + +   +KN NG    
Sbjct: 812 HIP--LTQDIAGDPSYEISKQRLSIVIGVVAGIMTVILIILIVVMARYCRSKNKNGYEAG 869

Query: 293 SHSKNDSFLSNVILPEKH 310
                D F      P++H
Sbjct: 870 KKDHEDFF-----TPQQH 882


>gi|170295849|ref|NP_001116230.1| protocadherin 7 isoform 1 precursor [Mus musculus]
          Length = 1255

 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 62/203 (30%), Positives = 92/203 (45%), Gaps = 21/203 (10%)

Query: 37  GTSLRELQFSKNEYSVSALENLPVNYV--LLTVTTNKPRDLRVKYWLSNDYGERFSIS-R 93
           G S+ E+ F +N        N+P   V  +L    +  ++  + Y L +     F+I   
Sbjct: 536 GQSVVEVYFPEN--------NIPGERVATVLATDADSGKNAEIAYSLDSSVMGTFAIDPD 587

Query: 94  QGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELF 150
            GDI +   LD E  D Y F V A D    ++  S TV + V + ND DP+F    +  +
Sbjct: 588 SGDILVNTVLDREQTDRYEFKVNAKDKGIPVLQGSTTVIVQVADKNDNDPKFMQDVFTFY 647

Query: 151 LPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSI-NDSGHI-SIVDLSAL 207
           +      +L P S +G V   D DKG    +SL       +FSI ND+G I S +     
Sbjct: 648 VKE----NLQPNSPVGMVTVMDADKGRNAEMSLYIEENSNIFSIENDTGTIYSTMSFDRE 703

Query: 208 NTSTIQLVVVATDTGNPPRQASV 230
           + +T    V A D G+PPR A+ 
Sbjct: 704 HQTTYTFRVKAVDGGDPPRSATA 726



 Score = 44.7 bits (104), Expect = 0.079,   Method: Compositional matrix adjust.
 Identities = 78/316 (24%), Positives = 133/316 (42%), Gaps = 46/316 (14%)

Query: 30  TLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVT---TNKPRDLRVKYWLSNDYG 86
           T+IV  A  +  + +F ++ ++    ENL  N  +  VT    +K R+  +  ++  +  
Sbjct: 624 TVIVQVADKNDNDPKFMQDVFTFYVKENLQPNSPVGMVTVMDADKGRNAEMSLYIEEN-S 682

Query: 87  ERFSISRQ-GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRF 142
             FSI    G I      D E + +Y F V A D      + +ATV++ V++ ND  P  
Sbjct: 683 NIFSIENDTGTIYSTMSFDREHQTTYTFRVKAVDGGDPPRSATATVSLFVMDENDNAPTV 742

Query: 143 RYPQ---YELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIND- 195
             P+   Y L  P   +      +V+  V A D D G    L+   + G   K+F I+  
Sbjct: 743 TLPRNISYTLLPPSSNVR-----TVVATVLATDSDDGINADLNYSIVGGNPFKLFEIDST 797

Query: 196 SGHISIV-DLSALNTSTIQLVVVATDTGNPPRQA----------SVPAIMHFPEAIVQQA 244
           SG +S+V  L+  +    +LVV   D+G P +            SV         IV+  
Sbjct: 798 SGVVSLVGKLTQKHYGLHRLVVQVNDSGQPSQSTTTLVHVFVNESVSNATVIDSQIVRSL 857

Query: 245 SSKLNSG---------TSSTVLIILGVVLIVLGFVIILLILYIHKNKHTKN-NGPPGSSH 294
            + L            +   + I++GVV  ++  ++I+LI+ + +   +KN NG      
Sbjct: 858 HTPLTQDIAGDPSYEISKQRLSIVIGVVAGIMTVILIILIVMMARYCRSKNKNGYEAGKK 917

Query: 295 SKNDSFLSNVILPEKH 310
              D F      P++H
Sbjct: 918 DHEDFF-----TPQQH 928



 Score = 41.2 bits (95), Expect = 0.88,   Method: Compositional matrix adjust.
 Identities = 40/150 (26%), Positives = 68/150 (45%), Gaps = 26/150 (17%)

Query: 93  RQGDISLMQCLDYETEDSYRFTVY---ATDTLMTTSATVNISVVNVNDWDPRFRYPQYEL 149
           +Q  + +   LD E  DSY  T+      D   ++ A + + + +VND  PRF    YE 
Sbjct: 256 KQPQLIVKGALDREQRDSYELTLRVRDGGDPPRSSQAILRVLITDVNDNSPRFEKSVYEA 315

Query: 150 FLPHIPLADLTPGSVIGKVEAADGDKG---------DRVTLSLRGPYEKMFSIND-SGHI 199
            L      +  PG+ I ++ A D D G            T S+R    ++  +++ SG +
Sbjct: 316 DLAE----NSAPGTPILQLRATDLDVGVNGQIEYVFGAATESVR----RLLRLDETSGWL 367

Query: 200 SI---VDLSALNTSTIQLVVVATDTGNPPR 226
           S+   +D   +N   ++  V+A D G PP+
Sbjct: 368 SVLHRIDREEVN--QLRFTVMARDRGQPPK 395


>gi|380028708|ref|XP_003698032.1| PREDICTED: LOW QUALITY PROTEIN: cadherin-related tumor
            suppressor-like [Apis florea]
          Length = 4483

 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 57/206 (27%), Positives = 99/206 (48%), Gaps = 15/206 (7%)

Query: 44   QFSKNEYSVSALEN-LPVNYVLLTVTTNKPRDL--RVKYWLSNDYGERFSISRQ-GDISL 99
            +F++ EY  +  EN +   +V     T+K   L  +++Y L  +  ERF++  + G++  
Sbjct: 1853 EFTRQEYRATVTENSVSRTWVTKPHATDKDEGLNAKIRYSLLGENSERFTVDPETGEVFT 1912

Query: 100  MQCLDYETEDSYRFTVYATDTLMT----TSATVNISVVNVNDWDPRFRYPQYELFLPHIP 155
            +  LD E    Y  T+ A D+  T    ++  + I V +VND  PRF  P+Y  ++P   
Sbjct: 1913 VVPLDREQTSVYHLTLVAQDSSPTEPQASAVNLTIFVKDVNDNAPRFSSPRYTAYVP--- 1969

Query: 156  LADLTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSIN-DSGHISIVDLSALNTSTI 212
                  G  +   +A D D G+  R+   L+G   + F I+ +SG I      A + +T 
Sbjct: 1970 -GATKSGDFVFGAKAVDDDDGENSRIVYRLQGIDAEKFVIDSNSGVIRATQELANDETTY 2028

Query: 213  QLVVVATDTGNPPRQASVPAIMHFPE 238
            QL + A+D G  P+  +   ++H  E
Sbjct: 2029 QLQIQASDCGVKPQSVTADLVIHLWE 2054



 Score = 65.5 bits (158), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 69/200 (34%), Positives = 94/200 (47%), Gaps = 19/200 (9%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTV-TTNKPRDLRVKYWLS----NDYGERFSISRQ-GDI 97
            QF +  Y V   E   +   LL V TT+    L    + S    N YG RF+I    G I
Sbjct: 1220 QFQRLPYRVQVNEGAAIGTQLLRVYTTDADEGLNGDVFYSLEDGNQYG-RFAIDEATGQI 1278

Query: 98   SLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLA 157
            SLM+ LD ET D+Y  TV A D L      +NI V + ND  P F+   Y   +P     
Sbjct: 1279 SLMKELDRETMDTYVLTVVAHDLLTHRDIILNIQVTDTNDNAPTFQNTAYSFDVPE---- 1334

Query: 158  DLTPGSVIGKVEAADGDK-GDRVTLS---LRGPYEKMFSINDSGHISIVDLSALNTSTIQ 213
            ++  GS IG+V A D D  G    LS   +      +FS+N S  +  +  ++L+   +Q
Sbjct: 1335 NMPRGSRIGQVVATDADADGPNSQLSYTLISDWANDVFSLNPSTGVFTL-TASLDYEQVQ 1393

Query: 214  ---LVVVATDTGNPPRQASV 230
               LVV ATD G P   ++V
Sbjct: 1394 HYILVVQATDGGIPALSSTV 1413



 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 70/230 (30%), Positives = 100/230 (43%), Gaps = 26/230 (11%)

Query: 13   LVVRAIQYD---NQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTT 69
            L VRAI       +D  +L TL++S  G +     F+   + V   EN PVN  +LTV+ 
Sbjct: 2557 LKVRAIDKGVPPQKDEVSL-TLVIS--GENKHAPTFAAVSHQVRVPENEPVNTTILTVSA 2613

Query: 70   NKPRD-----LRVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDTLMTT 124
                D     +R K    N+  E F  S  G +++++ LDY+    Y+  + ATD     
Sbjct: 2614 TDGDDGPNGMIRYKISAGNEKNEFFVHSITGAVTILEPLDYDLVQEYKLNITATDLGFEA 2673

Query: 125  SATVNISVVNV---NDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTL 181
               V I  VNV   ND  P F    YE +LP     +  P S + KV A D D      +
Sbjct: 2674 KQAVAILTVNVSDINDNPPTFNQSVYEAYLPE----NSPPDSFVYKVIAKDIDSPKYAVI 2729

Query: 182  S---LRGPYEKMFSI-NDSGHISIV---DLSALNTSTIQLVVVATDTGNP 224
                L G  +  F I  D+G I+ +   D    N  T+ +V    D+ NP
Sbjct: 2730 EYKILGGTGKDHFRIREDTGEITSLISFDYEEANEYTLDIVAANPDS-NP 2778



 Score = 58.5 bits (140), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 61/214 (28%), Positives = 103/214 (48%), Gaps = 19/214 (8%)

Query: 25  RYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVT-------TNKPRDLRV 77
           +YA   L V+    +    +FS+N   V+  EN P   ++ T+T       TN       
Sbjct: 590 KYASTHLKVTILDENDEAPRFSQNVVQVTLSENTPPQSLVATLTAVDNDQGTNGSVAYSF 649

Query: 78  KYWLSNDYGERFSISR-QGDISLMQCLDYETEDSYRFTVYATDTL---MTTSATVNISVV 133
              +  DY + F++    G ++    LD ET   YR  V A D      +++ATV +++ 
Sbjct: 650 HSSVPRDYPKTFALDGLTGQLTTKVHLDRETIAEYRILVIAKDQGTPPQSSTATVILTLK 709

Query: 134 NVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMF 191
           +VND  P F   +Y + +P     D  PG+ +GKV A D D  +  +V  SL    E +F
Sbjct: 710 DVNDNSPVFYPWRYLMAVPE----DAPPGTSVGKVMATDADARENAQVRYSLESGGEGLF 765

Query: 192 SIND-SGHISIV-DLSALNTSTIQLVVVATDTGN 223
           ++++ +G I++   L A + +  +L + A DTG+
Sbjct: 766 AVDERTGEITLQGSLRAAHKTLYELNISAKDTGD 799



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 54/171 (31%), Positives = 83/171 (48%), Gaps = 20/171 (11%)

Query: 72   PRDLRVKYWLSNDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDTL---MTTSAT 127
            P + +V+Y+L     + F I +  GDI L++ LD E    Y  T+ A DT    +T S  
Sbjct: 1780 PYNDQVRYFLKEGDTDLFRINASTGDIFLLRPLDRELVPEYTLTLVAMDTGSPPLTGSGI 1839

Query: 128  VNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSV----IGKVEAADGDKG--DRVTL 181
            V I V++VND  P F   +Y         A +T  SV    + K  A D D+G   ++  
Sbjct: 1840 VRIVVLDVNDHIPEFTRQEYR--------ATVTENSVSRTWVTKPHATDKDEGLNAKIRY 1891

Query: 182  SLRGPYEKMFSIN-DSGHI-SIVDLSALNTSTIQLVVVATDTGNPPRQASV 230
            SL G   + F+++ ++G + ++V L    TS   L +VA D+     QAS 
Sbjct: 1892 SLLGENSERFTVDPETGEVFTVVPLDREQTSVYHLTLVAQDSSPTEPQASA 1942



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 57/230 (24%), Positives = 107/230 (46%), Gaps = 24/230 (10%)

Query: 13   LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNK- 71
            L+V A           AT++V+    +    QF++  +SV+  EN  +   ++ +T++  
Sbjct: 2239 LIVEARDEGQPSLTGTATVLVTVLDKNDNPPQFTR-LFSVNVTENAEIGTFVIRITSSDL 2297

Query: 72   --PRDLRVKYWLSNDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDTLMTTSATV 128
               ++  V Y  + + G++F++ +  G++++   LD E +D Y   + A D     +  +
Sbjct: 2298 DIGQNANVSYRFTENPGQKFAMDALSGNVTVNGHLDREEQDEYLLKLVAADGAWQAATAL 2357

Query: 129  NISVVNVNDWDPRFRYPQYELFLPHIPLADLTPG-SVIGKVEAADGDK---GDRVTLSLR 184
             I++ + ND  P F    Y    P     +L P  + +G+V A D DK      ++ SL 
Sbjct: 2358 TITIQDQNDNPPEFDEESYHFHFP-----ELQPSVAHVGQVTAIDRDKQGPNSVISYSLL 2412

Query: 185  GPYEKMFSINDS-GHI-SIVDLSALNT-------STIQLVVVATDTGNPP 225
             P + +F+++ + G + S   L   +T       +   L VVATD G PP
Sbjct: 2413 QPSD-LFTVDPATGDVFSKKTLKYKHTHRPSSPENLYSLTVVATDNGKPP 2461



 Score = 47.4 bits (111), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 55/238 (23%), Positives = 106/238 (44%), Gaps = 20/238 (8%)

Query: 13  LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVT-TNK 71
           L V A       R A A L++     +  E  F ++EYS    E  P+   + +++ T+ 
Sbjct: 473 LTVVATDKGTPPRSATAYLVIHVNDVNDHEPVFQQSEYSAVLSELSPIGSFVASISATDA 532

Query: 72  PRDLRVKYWLSNDYGER---FSISRQ-GDISLMQCLDYETEDSYRFTVYATD---TLMTT 124
              L  + +   D G     F+I +  G ++ +  LD E + S    V A D   +    
Sbjct: 533 DSGLNARIYYELDSGNEQGWFAIDQDTGLVTTIATLDREVQGSIELHVSARDGGPSPKYA 592

Query: 125 SATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTL--- 181
           S  + +++++ ND  PRF     ++ L      +  P S++  + A D D+G   ++   
Sbjct: 593 STHLKVTILDENDEAPRFSQNVVQVTLSE----NTPPQSLVATLTAVDNDQGTNGSVAYS 648

Query: 182 ---SLRGPYEKMFSIND-SGHISI-VDLSALNTSTIQLVVVATDTGNPPRQASVPAIM 234
              S+   Y K F+++  +G ++  V L     +  +++V+A D G PP+ ++   I+
Sbjct: 649 FHSSVPRDYPKTFALDGLTGQLTTKVHLDRETIAEYRILVIAKDQGTPPQSSTATVIL 706



 Score = 44.7 bits (104), Expect = 0.069,   Method: Compositional matrix adjust.
 Identities = 50/187 (26%), Positives = 80/187 (42%), Gaps = 29/187 (15%)

Query: 76   RVKYWLSNDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNIS 131
            +V Y+L ND+ E F I S  G+IS    LD E   SY   V A D     +T +ATV ++
Sbjct: 2201 QVSYYLVNDFTETFIIDSDNGEISTNAKLDREEIASYELIVEARDEGQPSLTGTATVLVT 2260

Query: 132  VVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR---GPYE 188
            V++ ND  P+F      LF  ++   +   G+ + ++ ++D D G    +S R    P +
Sbjct: 2261 VLDKNDNPPQFT----RLFSVNV-TENAEIGTFVIRITSSDLDIGQNANVSYRFTENPGQ 2315

Query: 189  KMF------SINDSGHIS-----------IVDLSALNTSTIQLVVVATDTGNPPRQASVP 231
            K        ++  +GH+            +    A   +T   + +     NPP      
Sbjct: 2316 KFAMDALSGNVTVNGHLDREEQDEYLLKLVAADGAWQAATALTITIQDQNDNPPEFDEES 2375

Query: 232  AIMHFPE 238
               HFPE
Sbjct: 2376 YHFHFPE 2382



 Score = 44.7 bits (104), Expect = 0.087,   Method: Compositional matrix adjust.
 Identities = 45/136 (33%), Positives = 67/136 (49%), Gaps = 14/136 (10%)

Query: 103 LDYETEDSYRFTVYATDTLM---TTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADL 159
           LD E    Y  TV ATD      + +A + I V +VND +P F+  +Y        L++L
Sbjct: 463 LDREEIPKYNLTVVATDKGTPPRSATAYLVIHVNDVNDHEPVFQQSEYSAV-----LSEL 517

Query: 160 TP-GSVIGKVEAADGDKG--DRVTLSL-RGPYEKMFSIN-DSGHI-SIVDLSALNTSTIQ 213
           +P GS +  + A D D G   R+   L  G  +  F+I+ D+G + +I  L      +I+
Sbjct: 518 SPIGSFVASISATDADSGLNARIYYELDSGNEQGWFAIDQDTGLVTTIATLDREVQGSIE 577

Query: 214 LVVVATDTGNPPRQAS 229
           L V A D G  P+ AS
Sbjct: 578 LHVSARDGGPSPKYAS 593



 Score = 42.7 bits (99), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 43/182 (23%), Positives = 83/182 (45%), Gaps = 15/182 (8%)

Query: 6    DFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVN---Y 62
            D +Q   L + A     + + A+A L V+ +  +     F+++ Y     EN P +   Y
Sbjct: 2655 DLVQEYKLNITATDLGFEAKQAVAILTVNVSDINDNPPTFNQSVYEAYLPENSPPDSFVY 2714

Query: 63   VLLTVTTNKPRDLRVKYWLSNDYG-ERFSISRQ-GDISLMQCLDYETEDSYRFTVYA--- 117
             ++    + P+   ++Y +    G + F I    G+I+ +   DYE  + Y   + A   
Sbjct: 2715 KVIAKDIDSPKYAVIEYKILGGTGKDHFRIREDTGEITSLISFDYEEANEYTLDIVAANP 2774

Query: 118  -TDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTP-GSVIGKVEAADGDK 175
             ++  M    TV + V  VN++ P+F  P +     H+ +++    G+ +G V+A D D 
Sbjct: 2775 DSNPQMVGFTTVLVRVTGVNEYYPKFIQPVF-----HMDVSESAEVGTSVGLVQATDQDA 2829

Query: 176  GD 177
            G+
Sbjct: 2830 GE 2831



 Score = 40.0 bits (92), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 52/202 (25%), Positives = 83/202 (41%), Gaps = 32/202 (15%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSN-DYGERFSISRQGDISLM 100
            F    ++V  +EN  +   +L+VT    +   + RV Y ++  D    F ++  G +   
Sbjct: 1429 FEAGPHAVDIVENTTIGTPILSVTAQDLDSGDNGRVIYAVAGGDENGDFGVAPNGTLFTR 1488

Query: 101  QCLDYETEDSYRFTVYATDTLMTTSA----TVNISVV--NVNDWDPRFRYPQYELFLPHI 154
            + LD E +  Y   + ATD+          TV ++VV  +VND  P F  P     + + 
Sbjct: 1489 KLLDREQKPLYNLVLSATDSPPPPGLPLSSTVQVTVVLLDVNDMSPEFISPTKISIIENA 1548

Query: 155  PLADLTPGSVIGKVEAADGDKGDR--VTLSLR--------GPYEKMFSINDSGHISIVDL 204
            P       +V+  ++A D D+G    V  SL         GP + +  ++ S       L
Sbjct: 1549 P-----SNTVVMAIKAVDRDEGRNGYVEYSLEDTTLPFTVGPVDGLLRVSGS-------L 1596

Query: 205  SALNTSTIQLVVVATDTGNPPR 226
                 S   L V A D G PPR
Sbjct: 1597 DRELRSNYTLEVTAKDRGEPPR 1618



 Score = 39.3 bits (90), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 54/229 (23%), Positives = 94/229 (41%), Gaps = 49/229 (21%)

Query: 45  FSKNEYSVSALENLPVNYVLLTV-TTNKPRD--LRVKYWLSNDYGERFSI---------- 91
           F +++Y V+  E+ P+   +LTV  T+K  +   ++ Y+L  D   +F+I          
Sbjct: 277 FQQSDYVVALNESAPIGTKVLTVRATDKDSEDNSKLTYYLP-DTERQFTIDPDTGTVTTI 335

Query: 92  -------------SRQGDISLMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNV 135
                        +R GD  L  C+          TV+A D           V +++++ 
Sbjct: 336 EPLDCPQQSCTGAARLGDGCLKSCV---------ITVFARDHGSPRQDGRTYVTVNLLDA 386

Query: 136 NDWDPRFRYPQYELFLPHIPLAD--LTPGSVIGKVEAADGDKG--DRVTLSLRGPYE-KM 190
           ND DP  ++  Y    P     D      S++  +   D D+G     ++ +R   E   
Sbjct: 387 NDHDPEIKF-SYFPITPGYATVDENAVKDSIVAAITVIDNDEGLNGETSVEIRAGNELGH 445

Query: 191 FSINDSGHISIVDLSA-LNTSTI---QLVVVATDTGNPPRQASVPAIMH 235
           F +  +    +V ++  L+   I    L VVATD G PPR A+   ++H
Sbjct: 446 FRLQTAATFDVVRVNGGLDREEIPKYNLTVVATDKGTPPRSATAYLVIH 494



 Score = 38.9 bits (89), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 51/194 (26%), Positives = 76/194 (39%), Gaps = 20/194 (10%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNK---PRDLRVKYWLSNDYGE-RFSISRQGDISLM 100
            F    Y  S  E+ PVN    ++T        + RV Y +++   E RF I   G + + 
Sbjct: 1008 FKLTSYETSLPESTPVNDRFFSLTATDVDLGANGRVLYSVTDGNTENRFGIFPDGQLYVK 1067

Query: 101  QCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLA 157
              LD E +D Y   V ATD      ++   V + +++ ND  P F    + L L      
Sbjct: 1068 NVLDREEQDYYALEVTATDQGSPSRSSVVPVVVHIIDENDNAPEFTNSSFILHL----RE 1123

Query: 158  DLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSGHISIVDLSALN--------- 208
            +  P + +GK+ A D D G    L    P  +     D  +  I  L A +         
Sbjct: 1124 NEPPDTFVGKLLATDRDVGRNADLVFSLPASQQDFTVDPRNGFIKSLRAFDRELLVTNTG 1183

Query: 209  TSTIQLVVVATDTG 222
            +S I L    TD G
Sbjct: 1184 SSYITLEATVTDNG 1197


>gi|355709494|gb|AES03610.1| protocadherin 7 isoform a precursor [Mustela putorius furo]
          Length = 522

 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 62/202 (30%), Positives = 92/202 (45%), Gaps = 21/202 (10%)

Query: 37  GTSLRELQFSKNEYSVSALENLPVNYV--LLTVTTNKPRDLRVKYWLSNDYGERFSIS-R 93
           G S+ E+ F +N        N+P   V  +L    +  ++  + Y L +     F+I   
Sbjct: 304 GQSVVEVYFPEN--------NIPGERVATVLATDADSGKNAEIAYSLDSSVMGIFAIDPD 355

Query: 94  QGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELF 150
            GDI +   LD E  D Y F V A D    ++  S TV + V + ND DP+F    +  +
Sbjct: 356 SGDILVNTVLDREQTDRYEFKVNAKDKGIPVLQGSTTVIVQVADKNDNDPKFMQDVFTFY 415

Query: 151 LPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSI-NDSGHI-SIVDLSAL 207
           +      +L P S +G V   D DKG    +SL       +FSI ND+G I S +     
Sbjct: 416 VKE----NLQPNSPVGMVTVMDADKGRNAEMSLYIEENSNIFSIENDTGTIYSTMSFDRE 471

Query: 208 NTSTIQLVVVATDTGNPPRQAS 229
           + +T    V A D G+PPR A+
Sbjct: 472 HQTTYTFRVKAVDGGDPPRSAT 493



 Score = 42.7 bits (99), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 41/161 (25%), Positives = 72/161 (44%), Gaps = 26/161 (16%)

Query: 92  SRQGDISLMQCLDYETEDSYRFTVY---ATDTLMTTSATVNISVVNVNDWDPRFRYPQYE 148
            +Q  + +   LD E  DSY  T+      D   ++ A + + + +VND  PRF    YE
Sbjct: 23  EKQPQLIVKGALDREQRDSYELTLRVRDGGDPPRSSQAILRVLITDVNDNSPRFEKSVYE 82

Query: 149 LFLPHIPLADLTPGSVIGKVEAADGDKG---------DRVTLSLRGPYEKMFSIND-SGH 198
             L      +  PG+ I ++ AAD D G            T S+R    ++  +++ SG 
Sbjct: 83  ADLAE----NSAPGTPILQLRAADLDVGVNGQIEYVFGAATESVR----RLLRLDETSGW 134

Query: 199 ISI---VDLSALNTSTIQLVVVATDTGNPPRQASVPAIMHF 236
           +S+   +D   +N   ++  V+A D G PP+      +++ 
Sbjct: 135 LSVLHRIDREEVN--QLRFTVMARDRGQPPKTDKATVVLNI 173


>gi|194764619|ref|XP_001964426.1| GF23055 [Drosophila ananassae]
 gi|190614698|gb|EDV30222.1| GF23055 [Drosophila ananassae]
          Length = 1965

 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 62/194 (31%), Positives = 97/194 (50%), Gaps = 20/194 (10%)

Query: 55   LENLPVNYVLLTVTTNKPRDLRVKYWLS-NDYGERFSISRQ-GDISLMQCLDYETEDSYR 112
            +E  P+  VL T+          +Y +S NDY   F+I++  G I  +  LDYE     +
Sbjct: 1008 VEEQPIGTVLTTLQATDEDSSIGEYNISANDY---FAINQTTGMIYTIAQLDYEAVKEVK 1064

Query: 113  FTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTP-GSVIGKV 168
            F    +DT    +T +A V + ++N+ND +P+F    Y     +  + + +P G+V GKV
Sbjct: 1065 FLATVSDTGVPALTATADVVVDIINLNDNEPKFTQSDY-----YFNITENSPRGTVAGKV 1119

Query: 169  EAADGDKG--DRVTLSLRGPYEKMFSIND-SGHISIVDLSALNTSTIQ---LVVVATDTG 222
            EA DGD G    +T +L G   K FSI+  +G++ + + S L+   I+   L VVA D  
Sbjct: 1120 EAHDGDVGVFGEITYTLIGENNKYFSIDAYTGNVMVANSSILDREQIKELTLSVVAQDKA 1179

Query: 223  NPPRQASVPAIMHF 236
                Q S  A +H 
Sbjct: 1180 PATVQKSATATIHI 1193



 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 46/134 (34%), Positives = 65/134 (48%), Gaps = 23/134 (17%)

Query: 102 CLDYETEDSYRFTVYATDTLMTTSATV---NISVVNVNDWDPRFRYPQYELFLPHIPLAD 158
           CLDYETE +Y  +  ATD   + S +V    ISV + ND  P    P Y         A 
Sbjct: 620 CLDYETETTYFLSYKATDDNGSGSTSVVSLRISVTDANDSPPVCESPLYR--------AS 671

Query: 159 LTPGSVIGK----VEAADGDKGDRVTLSLRGP--YEKMFSIN-DSGHISI-----VDLSA 206
           +  GSV+      V+A D D    ++  +RG    E +F I+ +SG ISI     +D++ 
Sbjct: 672 VDEGSVVFDSPLIVKARDADTMSSISYRIRGSEQVESIFDIDRESGQISIRPNASLDVTN 731

Query: 207 LNTSTIQLVVVATD 220
           LN+  +  VV A D
Sbjct: 732 LNSDQLIFVVEAHD 745



 Score = 48.9 bits (115), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 69/240 (28%), Positives = 106/240 (44%), Gaps = 42/240 (17%)

Query: 5   DDFLQPITLVVRAIQYDN----QDRYALATLIVSKAGTSLRELQ-----FSKNEYSVSAL 55
           DD    ITL +RA +  N     D    AT   +KA  ++R++      F++ EY+VS L
Sbjct: 312 DDSTGIITLGIRARELVNGVPSDDPLTSAT---AKATVTIRDVNDSPPVFNRKEYAVSLL 368

Query: 56  ENLPVNYVLLTVTTNKPRDLRV--KYWLS-NDYGERFSIS-------RQGDISLMQ-CLD 104
           EN P    L    +    D+ V  K+ L   D    F +         Q +I +    LD
Sbjct: 369 ENTPPGTPLALDMSVSDADVGVNSKFALRLEDVSGVFDVEPKLVTGYSQVNIRVANGTLD 428

Query: 105 YETEDSYRFTVYA----TDT--LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLAD 158
           YE  +  +F V      TDT   ++++AT+ +SV++ ND  P F    Y   +    L  
Sbjct: 429 YENPNQRKFIVLVVAEETDTSPRLSSTATITVSVLDANDNKPVFERDSYSASISEAAL-- 486

Query: 159 LTPGSVIGKVEAAD------GDKGDRVTLSLRGPYEKMFSIND-SGHISIVDLSALNTST 211
             PG  I  + A D      GD G R +LS  G   ++F +N+ +G IS+ +      S+
Sbjct: 487 --PGQYIATITAKDVDSGSYGDSGIRYSLSGTGA--ELFHVNEQTGVISLANCHGEGESS 542



 Score = 41.6 bits (96), Expect = 0.64,   Method: Compositional matrix adjust.
 Identities = 58/242 (23%), Positives = 91/242 (37%), Gaps = 44/242 (18%)

Query: 28   LATLIVSKAGTSLRELQFSKNEYSVSALEN----LPVNYVLLTVTTNKPRDLRVKYWLSN 83
            L ++ +  A  +  E   + N Y VS  EN    + + ++     +   RD+     L N
Sbjct: 1410 LLSVSIVDANENRPEFPDASNPYKVSINENSGRDVKIGHIQAASRSKHNRDIFYYMLLGN 1469

Query: 84   DYGERFSISRQGDISLMQCLDYETEDSYRFTVYAT-----------------DTLM--TT 124
            + G  +     GDI   + LD E  DSY   + A+                  TL    T
Sbjct: 1470 EDGAFYVDKLTGDIYTNKSLDREQTDSYTLYILASIKADLHISEEERASFSIKTLNRDNT 1529

Query: 125  SATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR 184
             A V I+V++VND  P F  P Y   +     A+   G+ I  V A D D+G    +   
Sbjct: 1530 VAKVAITVLDVNDNPPVFEKPIYYAGVN----ANAKMGAAIALVNATDADQGKNAKIEYM 1585

Query: 185  GPYEKM----------------FSINDSGHISIVDLSA-LNTSTIQLVVVATDTGNPPRQ 227
                 +                F+I+  G I+   + A  N    +L ++A +   P R 
Sbjct: 1586 IVASNLYKFGASKATGSIVPSPFAISQDGRITANTIMAEYNQDHFELEIIARELEQPQRS 1645

Query: 228  AS 229
            AS
Sbjct: 1646 AS 1647



 Score = 40.8 bits (94), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 47/148 (31%), Positives = 66/148 (44%), Gaps = 19/148 (12%)

Query: 89  FSISRQ-GDISLM--QCLDYET--EDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFR 143
           F I R+ G IS+     LD      D   F V A D L T S  VNI+V +VN+  P F 
Sbjct: 710 FDIDRESGQISIRPNASLDVTNLNSDQLIFVVEAHDGLFTASCGVNITVRDVNNHVPSFD 769

Query: 144 YPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR---GPYEKMFSIND-SGHI 199
              Y   +      +   G+ + +V A D D G    L  R   G ++  F I++ +G +
Sbjct: 770 QESYNAVIEE----NSEIGTSVERVHATDLDTGKNAELRYRIQQGSFDD-FGIDERTGQV 824

Query: 200 SI---VDLSALNTSTIQLVVVATDTGNP 224
            +   +D    N  T QL V A+D G P
Sbjct: 825 FVSRKLDFDRRN--TYQLQVQASDLGTP 850



 Score = 38.5 bits (88), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 36/128 (28%), Positives = 59/128 (46%), Gaps = 13/128 (10%)

Query: 111  YRFTVYATDT----LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIG 166
            Y  T+ A DT     M ++A   I+V+ VN   P F  P        IP   + P  ++ 
Sbjct: 1277 YELTISARDTQGSGTMESTAKATITVLKVNRHKPEFLIPALSNATIEIPGDIVQPDYLLL 1336

Query: 167  KVEAADGDKGDRVTLS----LRGPYEKM---FSIND-SGHI-SIVDLSALNTSTIQLVVV 217
             V+AAD D  +   +S    +    E+    F I++ +G + +   L+  N +   +++V
Sbjct: 1337 TVKAADNDTDENGKISYHLQVNNRNEQQTGEFKIDEVTGELRARTQLNRKNRANYDIILV 1396

Query: 218  ATDTGNPP 225
            A D GNPP
Sbjct: 1397 ARDAGNPP 1404


>gi|380798035|gb|AFE70893.1| protocadherin-7 isoform d precursor, partial [Macaca mulatta]
          Length = 1028

 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 62/203 (30%), Positives = 92/203 (45%), Gaps = 21/203 (10%)

Query: 37  GTSLRELQFSKNEYSVSALENLPVNYV--LLTVTTNKPRDLRVKYWLSNDYGERFSIS-R 93
           G S+ E+ F +N        N+P   V  +L    +  ++  + Y L +     F+I   
Sbjct: 309 GQSVVEVYFPEN--------NIPGERVATVLATDADSGKNAEIAYSLDSSVMGIFAIDPD 360

Query: 94  QGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELF 150
            GDI +   LD E  D Y F V A D    ++  S TV + V + ND DP+F    +  +
Sbjct: 361 SGDILVNTVLDREQTDRYEFKVNAKDKGIPVLQGSTTVIVQVADKNDNDPKFMQDVFTFY 420

Query: 151 LPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSI-NDSGHI-SIVDLSAL 207
           +      +L P S +G V   D DKG    +SL       +FSI ND+G I S +     
Sbjct: 421 VKE----NLQPNSPVGMVTVMDADKGRNAEMSLYIEENNNIFSIENDTGTIYSTMSFDRE 476

Query: 208 NTSTIQLVVVATDTGNPPRQASV 230
           + +T    V A D G+PPR A+ 
Sbjct: 477 HQTTYTFRVKAVDGGDPPRSATA 499



 Score = 43.1 bits (100), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 41/150 (27%), Positives = 69/150 (46%), Gaps = 26/150 (17%)

Query: 93  RQGDISLMQCLDYETEDSYRFTVY---ATDTLMTTSATVNISVVNVNDWDPRFRYPQYEL 149
           +Q  + +   LD E  DSY  T+      D   ++ A + + + +VND  PRF    YE 
Sbjct: 29  KQPQLIVKGALDREQRDSYELTLRVRDGGDPPRSSQAILRVLITDVNDNSPRFEKSVYEA 88

Query: 150 FLPHIPLADLTPGSVIGKVEAADGDKG---------DRVTLSLRGPYEKMFSIND-SGHI 199
            L      +  PG+ I ++ AAD D G            T S+R    ++  +++ SG +
Sbjct: 89  DLAE----NSAPGTPILQLRAADLDVGVNGQIEYVFGAATESVR----RLLRLDETSGWL 140

Query: 200 SI---VDLSALNTSTIQLVVVATDTGNPPR 226
           S+   +D   +N   ++  V+A D G PP+
Sbjct: 141 SVLHRIDREEVN--QLRFTVMARDRGQPPK 168


>gi|354493663|ref|XP_003508959.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin-7-like [Cricetulus
           griseus]
          Length = 1255

 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 62/203 (30%), Positives = 92/203 (45%), Gaps = 21/203 (10%)

Query: 37  GTSLRELQFSKNEYSVSALENLPVNYV--LLTVTTNKPRDLRVKYWLSNDYGERFSIS-R 93
           G S+ E+ F +N        N+P   V  +L    +  ++  + Y L +     F+I   
Sbjct: 536 GQSVVEVYFPEN--------NIPGERVATVLATDADSGKNAEIAYSLDSSVMGTFAIDPD 587

Query: 94  QGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELF 150
            GDI +   LD E  D Y F V A D    ++  S TV + V + ND DP+F    +  +
Sbjct: 588 SGDILVNTVLDREQTDRYEFKVNAKDKGIPVLQGSTTVIVQVADKNDNDPKFMQDVFTFY 647

Query: 151 LPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSI-NDSGHI-SIVDLSAL 207
           +      +L P S +G V   D DKG    +SL       +FSI ND+G I S +     
Sbjct: 648 VKE----NLQPNSPVGMVTVMDADKGRNAEMSLYIEENSNIFSIENDTGTIYSTMSFDRE 703

Query: 208 NTSTIQLVVVATDTGNPPRQASV 230
           + +T    V A D G+PPR A+ 
Sbjct: 704 HQTTYTFRVKAVDGGDPPRSATA 726



 Score = 44.3 bits (103), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 78/316 (24%), Positives = 133/316 (42%), Gaps = 46/316 (14%)

Query: 30  TLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVT---TNKPRDLRVKYWLSNDYG 86
           T+IV  A  +  + +F ++ ++    ENL  N  +  VT    +K R+  +  ++  +  
Sbjct: 624 TVIVQVADKNDNDPKFMQDVFTFYVKENLQPNSPVGMVTVMDADKGRNAEMSLYIEEN-S 682

Query: 87  ERFSISRQ-GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRF 142
             FSI    G I      D E + +Y F V A D      + +ATV++ V++ ND  P  
Sbjct: 683 NIFSIENDTGTIYSTMSFDREHQTTYTFRVKAVDGGDPPRSATATVSLFVMDENDNAPTV 742

Query: 143 RYPQ---YELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-D 195
             P+   Y L  P   +      +V+  V A D D G    L+   + G   K+F I+  
Sbjct: 743 TLPRNISYTLLPPSSNVR-----TVVATVLATDSDDGINADLNYSIVGGNPFKLFEIDPT 797

Query: 196 SGHISIV-DLSALNTSTIQLVVVATDTGNPPRQA----------SVPAIMHFPEAIVQQA 244
           SG +S+V  L+  +    +LVV   D+G P +            SV         IV+  
Sbjct: 798 SGVVSLVGKLTQKHYGLHRLVVQVNDSGQPSQSTTTLVHVFVNESVSNATVIDSQIVRSL 857

Query: 245 SSKLNSG---------TSSTVLIILGVVLIVLGFVIILLILYIHKNKHTKN-NGPPGSSH 294
            + L            +   + I++GVV  ++  ++I+LI+ + +   +KN NG      
Sbjct: 858 HTPLTQDIAGDPSYEISKQRLSIVIGVVAGIMTVILIILIVMMARYCRSKNKNGYEAGKK 917

Query: 295 SKNDSFLSNVILPEKH 310
              D F      P++H
Sbjct: 918 DHEDFF-----TPQQH 928



 Score = 43.1 bits (100), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 41/150 (27%), Positives = 69/150 (46%), Gaps = 26/150 (17%)

Query: 93  RQGDISLMQCLDYETEDSYRFTVY---ATDTLMTTSATVNISVVNVNDWDPRFRYPQYEL 149
           +Q  + +   LD E  DSY  T+      D   ++ A + + + +VND  PRF    YE 
Sbjct: 256 KQPQLIVKGALDREQRDSYELTLRVRDGGDPPRSSQAILRVLITDVNDNSPRFEKSVYEA 315

Query: 150 FLPHIPLADLTPGSVIGKVEAADGDKG---------DRVTLSLRGPYEKMFSIND-SGHI 199
            L      +  PG+ I ++ AAD D G            T S+R    ++  +++ SG +
Sbjct: 316 DLAE----NSAPGTPILQLRAADLDVGVNGQIEYVFGAATESVR----RLLRLDETSGWL 367

Query: 200 SI---VDLSALNTSTIQLVVVATDTGNPPR 226
           S+   +D   +N   ++  V+A D G PP+
Sbjct: 368 SVLHRIDREEVN--QLRFTVMARDRGQPPK 395


>gi|449501192|ref|XP_004186119.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin 7 [Taeniopygia
           guttata]
          Length = 1011

 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 69/207 (33%), Positives = 93/207 (44%), Gaps = 25/207 (12%)

Query: 45  FSKNEYSVSALEN-LPVNYVLLTVTTNKP--RDLRVKYWLS------NDYGERFSIS-RQ 94
           FS+    VS  EN LP   V   V T+    ++  + Y L          G  FSI    
Sbjct: 344 FSQAVLEVSFPENNLPGERVATVVATDADSGKNAEITYSLEASPLSPEAPGSIFSIDPDS 403

Query: 95  GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFL 151
           GD+S+   LD E  D+Y F V A D     +  S TV + V + ND +PRF    +  ++
Sbjct: 404 GDVSVQAVLDREQRDTYEFQVTARDKGVPSLQGSTTVVVRVSDRNDNEPRFMQDVFTFYV 463

Query: 152 PHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR---GPYEK---MFSI-NDSGHI-SIVD 203
                 +L P S +G V   D DKG    LSL    G +E+   +FSI ND+G I S V 
Sbjct: 464 KE----NLQPNSPVGMVTVMDFDKGRNAELSLSIQPGDHEQAAGIFSIENDTGTIFSTVS 519

Query: 204 LSALNTSTIQLVVVATDTGNPPRQASV 230
                 ++    V A D G PPR A+ 
Sbjct: 520 FDREQQTSYTFKVKAVDGGEPPRSATA 546



 Score = 51.2 bits (121), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 82/320 (25%), Positives = 141/320 (44%), Gaps = 49/320 (15%)

Query: 30  TLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYG 86
           T++V  +  +  E +F ++ ++    ENL  N  +  VT    +K R+  +   +     
Sbjct: 439 TVVVRVSDRNDNEPRFMQDVFTFYVKENLQPNSPVGMVTVMDFDKGRNAELSLSIQPGDH 498

Query: 87  ER----FSISRQ-GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDW 138
           E+    FSI    G I      D E + SY F V A D      + +ATV++ V++ ND 
Sbjct: 499 EQAAGIFSIENDTGTIFSTVSFDREQQTSYTFKVKAVDGGEPPRSATATVSLFVMDENDN 558

Query: 139 DPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTL--SLRG--PYEKMFSIN 194
            P   +P    +    P +++   +V+  V A D D G    L  S+ G  P+ K+F I+
Sbjct: 559 APTVTFPSNSSYTVLPPSSNMR--TVVATVVATDADTGLNADLNYSIVGGNPF-KLFEID 615

Query: 195 D-SGHISIV-DLSALNTSTIQLVVVATDTGNPPR--------------------QASVPA 232
             SG +S+V  L+  +    +LVV   D+G PP+                    ++ V  
Sbjct: 616 PASGVVSLVGKLAPKHYGLHRLVVQVNDSGQPPQSTTALLHVFVNESLSNATVVESQVAR 675

Query: 233 IMHFPEA--IVQQASSKLNSGTSSTVLIILGVVLIVLGFVIILLILYIHKNKHTKNNGPP 290
            +H P A  I    S +L   +   + I++GVV  ++   +ILLIL +   ++ ++ G  
Sbjct: 676 SLHTPLAQDIAGDPSYEL---SKQRLSIVIGVVAGIM--TVILLILVVVMARYCRSKGKH 730

Query: 291 GSSHSKNDSFLSNVILPEKH 310
           G    K D    +   P++H
Sbjct: 731 GYEAGKKDH--EDFFTPQQH 748



 Score = 41.2 bits (95), Expect = 0.80,   Method: Compositional matrix adjust.
 Identities = 39/150 (26%), Positives = 69/150 (46%), Gaps = 26/150 (17%)

Query: 93  RQGDISLMQCLDYETEDSYRFTVY---ATDTLMTTSATVNISVVNVNDWDPRFRYPQYEL 149
           +Q  + +   LD E  DSY  ++      D   ++ A + + + +VND  PRF    YE 
Sbjct: 64  KQPQLIVKGALDREQRDSYELSLRVRDGGDPARSSQAILRVLITDVNDNSPRFEKSVYEA 123

Query: 150 FLPHIPLADLTPGSVIGKVEAADGDKG---------DRVTLSLRGPYEKMFSIND-SGHI 199
            L      + +PG+ I ++ A D D G            T S+R    ++  +++ SG +
Sbjct: 124 DLAE----NSSPGTPILQLRATDLDVGVNGQIEYVFGAATESVR----RLLRLDETSGWL 175

Query: 200 SI---VDLSALNTSTIQLVVVATDTGNPPR 226
           S+   +D   +N   ++  V+A D G PP+
Sbjct: 176 SVLHRIDREEVN--QLRFTVMARDRGQPPK 203


>gi|395817389|ref|XP_003782154.1| PREDICTED: protocadherin gamma-A5 [Otolemur garnettii]
          Length = 814

 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 62/194 (31%), Positives = 90/194 (46%), Gaps = 17/194 (8%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWLSNDYG---ERFSI-SRQGDI 97
           F+++EY VS  EN+P+   LLT+T   P +    ++ Y   N+     E F + S  G+I
Sbjct: 242 FTQSEYKVSVPENIPIGTQLLTLTATDPDEGINGKLTYSFHNEDDKILETFQLDSNLGEI 301

Query: 98  SLMQCLDYETEDSYRFTVYATD-TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
           S MQ LDYE    Y   V A D   +  SA V +SV +VND  P          L     
Sbjct: 302 STMQSLDYEESRFYLMEVVAQDGGALLASAKVLVSVQDVNDNAPEVILTSLTSSLSE--- 358

Query: 157 ADLTPGSVIGKVEAADGDKGD--RVTLSL--RGPYEKMFSINDSGH-ISIVDLSALNTST 211
            D  PG+VI      DGD G+   +T S+    P++   S+++  H ++   L    TS 
Sbjct: 359 -DCLPGTVIALFRVHDGDSGENGEITCSIPRNLPFKLEKSVDNYYHLLTTKTLDREETSD 417

Query: 212 IQLVVVATDTGNPP 225
             + +   D G PP
Sbjct: 418 YNITITVIDHGTPP 431



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 79/285 (27%), Positives = 128/285 (44%), Gaps = 48/285 (16%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKP---RDLRVKYWLSNDYGERFSISR-------Q 94
           FS   YS S LEN P    + ++T + P    + +V Y L  D  +   +S         
Sbjct: 452 FSHASYSTSLLENNPRGISIFSLTAHDPDSGENAQVTYSLVKDTFQGVPLSSYVSINSDT 511

Query: 95  GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFL 151
           G +  +Q LDYE     +  V A+D+    ++++ ++++ V++ ND  P   YP     L
Sbjct: 512 GVLYALQSLDYEQLRDLQLWVTASDSGNPPLSSNVSLSLFVLDQNDNAPEILYPA----L 567

Query: 152 P-----HIPLA--DLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-DSGHIS 200
           P      + LA     PG ++ KV A D D G    LS   L+     +FS+   +G + 
Sbjct: 568 PTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKASEPGLFSVGLHTGEVR 627

Query: 201 IV----DLSALNTSTIQLVVVATDTGNPPRQA----------SVPAIMHFPEAIVQQASS 246
            V    D  AL  +   LVV   D G PP  A          S+P ++   ++I   AS 
Sbjct: 628 TVRVLLDRDALKQT---LVVAVQDHGQPPLSATVTLTVAVADSIPEVLTDLDSIKTPASL 684

Query: 247 KLNSGTSSTVLIILGVVLIVLGFVIILLILYI---HKNKHTKNNG 288
           + +  T   V+ +  V  + L FVI+LL+L +   HK++  + +G
Sbjct: 685 EDSDLTLHLVVAVALVSCVFLIFVIVLLVLRLQRWHKSRLLQASG 729



 Score = 40.0 bits (92), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 44/143 (30%), Positives = 67/143 (46%), Gaps = 17/143 (11%)

Query: 101 QCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLA 157
           + LD E    Y  T+   D     ++T   +++ V +VND  P F +  Y   L    L 
Sbjct: 408 KTLDREETSDYNITITVIDHGTPPLSTEDCISLKVTDVNDNPPAFSHASYSTSL----LE 463

Query: 158 DLTPGSVIGKVEAADGDKGD--RVTLSL-----RG-PYEKMFSIN-DSGHI-SIVDLSAL 207
           +   G  I  + A D D G+  +VT SL     +G P     SIN D+G + ++  L   
Sbjct: 464 NNPRGISIFSLTAHDPDSGENAQVTYSLVKDTFQGVPLSSYVSINSDTGVLYALQSLDYE 523

Query: 208 NTSTIQLVVVATDTGNPPRQASV 230
               +QL V A+D+GNPP  ++V
Sbjct: 524 QLRDLQLWVTASDSGNPPLSSNV 546


>gi|395853833|ref|XP_003799405.1| PREDICTED: protocadherin-7 isoform 1 [Otolemur garnettii]
          Length = 1069

 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 62/203 (30%), Positives = 92/203 (45%), Gaps = 21/203 (10%)

Query: 37  GTSLRELQFSKNEYSVSALENLPVNYV--LLTVTTNKPRDLRVKYWLSNDYGERFSIS-R 93
           G S+ E+ F +N        N+P   V  +L    +  ++  + Y L +     F+I   
Sbjct: 536 GQSVVEVYFPEN--------NIPGQRVATVLATDADSGKNAEIAYSLDSSVMGVFAIDPD 587

Query: 94  QGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELF 150
            GDI +   LD E  D Y F V A D    ++  S TV + V + ND DP+F    +  +
Sbjct: 588 SGDILVNTVLDREQTDRYEFKVNAKDKGIPVLQGSTTVIVQVADKNDNDPKFMQDVFTFY 647

Query: 151 LPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSI-NDSGHI-SIVDLSAL 207
           +      +L P S +G V   D DKG    +SL       +FSI ND+G I S +     
Sbjct: 648 VKE----NLQPNSPVGMVTVMDADKGRNAEMSLFIQENSNIFSIENDTGTIYSTMSFDRE 703

Query: 208 NTSTIQLVVVATDTGNPPRQASV 230
           + +T    V A D G+PPR A+ 
Sbjct: 704 HQTTYTFRVKAVDGGDPPRSATA 726



 Score = 42.7 bits (99), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 41/160 (25%), Positives = 72/160 (45%), Gaps = 26/160 (16%)

Query: 93  RQGDISLMQCLDYETEDSYRFTVY---ATDTLMTTSATVNISVVNVNDWDPRFRYPQYEL 149
           +Q  + +   LD E  DSY  T+      D   ++ A + + + +VND  PRF    YE 
Sbjct: 256 KQPQLIVKGALDREQRDSYELTLRVRDGGDPPRSSQAILRVLITDVNDNSPRFEKSVYEA 315

Query: 150 FLPHIPLADLTPGSVIGKVEAADGDKG---------DRVTLSLRGPYEKMFSIND-SGHI 199
            L      +  PG+ I ++ AAD D G            T S+R    ++  +++ SG +
Sbjct: 316 DLAE----NSAPGTPILQLRAADLDVGVNGQIEYVFGAATESVR----RLLRLDETSGWL 367

Query: 200 SI---VDLSALNTSTIQLVVVATDTGNPPRQASVPAIMHF 236
           S+   +D   +N   ++  V+A D G PP+      +++ 
Sbjct: 368 SVLHRIDREEVN--QLRFTVMARDRGQPPKTDKATVVLNI 405


>gi|380798033|gb|AFE70892.1| protocadherin-7 isoform c precursor, partial [Macaca mulatta]
          Length = 1020

 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 62/203 (30%), Positives = 92/203 (45%), Gaps = 21/203 (10%)

Query: 37  GTSLRELQFSKNEYSVSALENLPVNYV--LLTVTTNKPRDLRVKYWLSNDYGERFSIS-R 93
           G S+ E+ F +N        N+P   V  +L    +  ++  + Y L +     F+I   
Sbjct: 309 GQSVVEVYFPEN--------NIPGERVATVLATDADSGKNAEIAYSLDSSVMGIFAIDPD 360

Query: 94  QGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELF 150
            GDI +   LD E  D Y F V A D    ++  S TV + V + ND DP+F    +  +
Sbjct: 361 SGDILVNTVLDREQTDRYEFKVNAKDKGIPVLQGSTTVIVQVADKNDNDPKFMQDVFTFY 420

Query: 151 LPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSI-NDSGHI-SIVDLSAL 207
           +      +L P S +G V   D DKG    +SL       +FSI ND+G I S +     
Sbjct: 421 VKE----NLQPNSPVGMVTVMDADKGRNAEMSLYIEENNNIFSIENDTGTIYSTMSFDRE 476

Query: 208 NTSTIQLVVVATDTGNPPRQASV 230
           + +T    V A D G+PPR A+ 
Sbjct: 477 HQTTYTFRVKAVDGGDPPRSATA 499



 Score = 43.1 bits (100), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 41/150 (27%), Positives = 69/150 (46%), Gaps = 26/150 (17%)

Query: 93  RQGDISLMQCLDYETEDSYRFTVY---ATDTLMTTSATVNISVVNVNDWDPRFRYPQYEL 149
           +Q  + +   LD E  DSY  T+      D   ++ A + + + +VND  PRF    YE 
Sbjct: 29  KQPQLIVKGALDREQRDSYELTLRVRDGGDPPRSSQAILRVLITDVNDNSPRFEKSVYEA 88

Query: 150 FLPHIPLADLTPGSVIGKVEAADGDKG---------DRVTLSLRGPYEKMFSIND-SGHI 199
            L      +  PG+ I ++ AAD D G            T S+R    ++  +++ SG +
Sbjct: 89  DLAE----NSAPGTPILQLRAADLDVGVNGQIEYVFGAATESVR----RLLRLDETSGWL 140

Query: 200 SI---VDLSALNTSTIQLVVVATDTGNPPR 226
           S+   +D   +N   ++  V+A D G PP+
Sbjct: 141 SVLHRIDREEVN--QLRFTVMARDRGQPPK 168


>gi|431892542|gb|ELK02975.1| Protocadherin gamma-C4 [Pteropus alecto]
          Length = 865

 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 64/230 (27%), Positives = 101/230 (43%), Gaps = 22/230 (9%)

Query: 13  LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKP 72
           LV+ A+   N  R   A L VS    +     F ++ Y +S LE+ P   +L+ +  + P
Sbjct: 210 LVLTAVDGGNPPRSGTAELRVSVLDVNDNAPAFQQSSYRISVLESAPAGMLLIQLNASDP 269

Query: 73  RDL----RVKYWLSNDYGER----FSI-SRQGDISLMQCLDYETEDSYRFTVYATD---T 120
            DL     V +  S    +R    FS+    G ++L   LD+E E+ Y F V A D    
Sbjct: 270 -DLGPSGNVTFSFSGHTPDRVRNLFSLHPTTGKLTLQGPLDFENENYYEFDVRARDGGSP 328

Query: 121 LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVT 180
            M    ++ + +++VND  P          LP        PG+V+  +   D D G    
Sbjct: 329 AMEQHCSLRVDLLDVNDNAPHITVTSELGTLPE----SAEPGTVVALISVQDPDSGSNGD 384

Query: 181 LSLRGPYEKMFSINDS--GHISIVDLSALN---TSTIQLVVVATDTGNPP 225
           +SLR P    F++  +     S+V    L+    S+  ++V A+D GNPP
Sbjct: 385 VSLRIPDHLPFALKSAFRNQFSLVTAGPLDREAKSSYDIMVTASDAGNPP 434



 Score = 47.8 bits (112), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 45/169 (26%), Positives = 78/169 (46%), Gaps = 27/169 (15%)

Query: 77  VKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVV 133
           + + L + +  +FS+   G       LD E + SY   V A+D     ++T  T+ +++ 
Sbjct: 393 LPFALKSAFRNQFSLVTAGP------LDREAKSSYDIMVTASDAGNPPLSTQRTIFLNIS 446

Query: 134 NVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMF 191
           +VND  P F    +E+F+P     +  PG ++  + A+D D G    ++ SL  P  +  
Sbjct: 447 DVNDNPPSFFQRSHEVFVPE----NNRPGDLLCSLAASDPDSGLNALISYSLLEPRNR-- 500

Query: 192 SINDSGHISIVDLSAL----------NTSTIQLVVVATDTGNPPRQASV 230
            ++ S  IS+   +             T T+Q  V A D GNPP  ++V
Sbjct: 501 DVSASSFISLNPQTGAVHATRSFDYEQTQTLQFEVQARDRGNPPLSSTV 549



 Score = 43.5 bits (101), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 49/190 (25%), Positives = 82/190 (43%), Gaps = 15/190 (7%)

Query: 95  GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYEL-- 149
           G +   +  DYE   + +F V A D     ++++ TV + V+++ND  P    P+     
Sbjct: 515 GAVHATRSFDYEQTQTLQFEVQARDRGNPPLSSTVTVRLFVLDLNDNAPAVLRPRARPGS 574

Query: 150 FLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIND-SGHISIVDLS 205
             P      +  G ++ KV A D D G    +S   L  P   +F+++  +G +      
Sbjct: 575 LCPQALPPSVGAGHLVTKVTAVDLDSGYNAWVSYQLLEAPDPSLFAVSRYAGEVRTAVPI 634

Query: 206 ALNTSTIQLVVVATDTGNPPRQASVPAIMHFPE---AIVQ--QASSKLNSGTSSTVLIIL 260
             +    +LV+V  D+G PP   SV  ++   E    +V   + SS    G S   L  L
Sbjct: 635 PADLPPQKLVIVVKDSGTPPLSTSVTLLVSLEEDAHPVVPDLRESSAPREGESRLTL-YL 693

Query: 261 GVVLIVLGFV 270
            V L+ + FV
Sbjct: 694 AVSLVAICFV 703


>gi|405957379|gb|EKC23594.1| Protocadherin-9 [Crassostrea gigas]
          Length = 1201

 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 73/274 (26%), Positives = 121/274 (44%), Gaps = 25/274 (9%)

Query: 45  FSKNEYSVSALENLPVN-YVLLTVTTNKPRDLR---VKYWLSNDYGER-FSISRQGDISL 99
           FS+  Y  + LENLP   +V   V  +K        +KY L         S++  G I  
Sbjct: 622 FSEPHYKFTVLENLPEKTHVGQVVAIDKDMGSNANILKYSLVKGSDNLPVSMAENGSIFT 681

Query: 100 MQCLDYET-EDSYRFTVYATD----TLMTTSATVNISVVNVNDWDPRFRYPQYE----LF 150
            Q LD E      +F V  TD      + ++  V++ + ++ND  P   +P  E     F
Sbjct: 682 NQPLDREALPHGLQFQVIVTDGGSPVSLFSTCYVSVFIEDINDNSPEILFPNNENYTISF 741

Query: 151 LPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSIN-DSGHISIV-DLSALN 208
           L  IP+      SV+G++ + D D G    LS       +FSI+ D G I +   LS  +
Sbjct: 742 LYDIPI-----NSVVGRIRSVDIDYGPNSALSYSFIGSDIFSIHADKGDIYVTRQLSPQD 796

Query: 209 TSTIQLVVVATDTGNPPRQASVPAIM----HFPEAIVQQASSKLNSGTSSTVLIILGVVL 264
                L V+  D G P R ++   ++       + ++  +  K +S T   + +++  V 
Sbjct: 797 IDRYTLTVIVEDQGTPSRSSNQSLVILVTSQHAQLVLADSREKSSSDTYMLIAVVISCVT 856

Query: 265 IVLGFVIILLILYIHKNKHTKNNGPPGSSHSKND 298
           +VLG VI+L+I  I +N   K+     +  S+N+
Sbjct: 857 VVLGGVILLIIFLIRRNDRNKSVSAQNTPKSQNN 890


>gi|2979420|dbj|BAA25195.1| PCDH7 (BH-Pcdh)b [Homo sapiens]
          Length = 1072

 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 62/203 (30%), Positives = 92/203 (45%), Gaps = 21/203 (10%)

Query: 37  GTSLRELQFSKNEYSVSALENLPVNYV--LLTVTTNKPRDLRVKYWLSNDYGERFSIS-R 93
           G S+ E+ F +N        N+P   V  +L    +  ++  + Y L +     F+I   
Sbjct: 536 GQSVVEVYFPEN--------NIPGERVATVLATDADSGKNAEIAYSLDSSVMGIFAIDPD 587

Query: 94  QGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELF 150
            GDI +   LD E  D Y F V A D    ++  S TV + V + ND DP+F    +  +
Sbjct: 588 SGDILVNTVLDREQTDRYEFKVNAKDKGIPVLQGSTTVIVQVADKNDNDPKFMQDVFTFY 647

Query: 151 LPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSI-NDSGHI-SIVDLSAL 207
           +      +L P S +G V   D DKG    +SL       +FSI ND+G I S +     
Sbjct: 648 VKE----NLQPNSPVGMVTVMDADKGRNAEMSLYIEENNNIFSIENDTGTIYSTMSFDRE 703

Query: 208 NTSTIQLVVVATDTGNPPRQASV 230
           + +T    V A D G+PPR A+ 
Sbjct: 704 HQTTYTFRVKAVDGGDPPRSATA 726



 Score = 45.8 bits (107), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 81/318 (25%), Positives = 138/318 (43%), Gaps = 50/318 (15%)

Query: 30  TLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVT---TNKPRDLRVKYWLSNDYG 86
           T+IV  A  +  + +F ++ ++    ENL  N  +  VT    +K R+  +  ++  +  
Sbjct: 624 TVIVQVADKNDNDPKFMQDVFTFYVKENLQPNSPVGMVTVMDADKGRNAEMSLYIEEN-N 682

Query: 87  ERFSISRQ-GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRF 142
             FSI    G I      D E + +Y F V A D      + +ATV++ V++ ND  P  
Sbjct: 683 NIFSIENDTGTIYSTMSFDREHQTTYTFRVKAVDGGDPPRSATATVSLFVMDENDNAPTV 742

Query: 143 RYPQ---YELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-D 195
             P+   Y L  P   +      +V+  V A D D G    L+   + G   K+F I+  
Sbjct: 743 TLPKNISYTLLPPSSNVR-----TVVATVLATDSDDGINADLNYSIVGGNPFKLFEIDPT 797

Query: 196 SGHISIV-DLSALNTSTIQLVVVATDTGNPPRQASVPAIMHF--------PEAIVQQASS 246
           SG +S+V  L+  +    +LVV   D+G P +  S   ++H           AI  Q + 
Sbjct: 798 SGVVSLVGKLTQKHYGLHRLVVQVNDSGQPSQ--STTTVVHVFVNESVSNATAIDSQIAR 855

Query: 247 KLN-------SGTSSTVL------IILGVVLIVLGFVIILLILYIHKNKHTKN-NGPPGS 292
            L+       +G  S  +      I++GVV  ++  ++I+LI+ + +   +KN NG    
Sbjct: 856 SLHIPLTQDIAGDPSYEISKQRLSIVIGVVAGIMTVILIILIVVMARYCRSKNKNGYEAG 915

Query: 293 SHSKNDSFLSNVILPEKH 310
                D F      P++H
Sbjct: 916 KKDHEDFF-----TPQQH 928



 Score = 43.1 bits (100), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 41/160 (25%), Positives = 72/160 (45%), Gaps = 26/160 (16%)

Query: 93  RQGDISLMQCLDYETEDSYRFTVY---ATDTLMTTSATVNISVVNVNDWDPRFRYPQYEL 149
           +Q  + +   LD E  DSY  T+      D   ++ A + + + +VND  PRF    YE 
Sbjct: 256 KQPQLIVKGALDREQRDSYELTLRVRDGGDPPRSSQAILRVLITDVNDNSPRFEKSVYEA 315

Query: 150 FLPHIPLADLTPGSVIGKVEAADGDKG---------DRVTLSLRGPYEKMFSIND-SGHI 199
            L      +  PG+ I ++ AAD D G            T S+R    ++  +++ SG +
Sbjct: 316 DLAE----NSAPGTPILQLRAADLDVGVNGQIEYVFGAATESVR----RLLRLDETSGWL 367

Query: 200 SI---VDLSALNTSTIQLVVVATDTGNPPRQASVPAIMHF 236
           S+   +D   +N   ++  V+A D G PP+      +++ 
Sbjct: 368 SVLHRIDREEVN--QLRFTVMARDRGQPPKTDKATVVLNI 405


>gi|2979418|dbj|BAA25194.1| PCDH7 (BH-Pcdh)a [Homo sapiens]
          Length = 1069

 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 62/203 (30%), Positives = 92/203 (45%), Gaps = 21/203 (10%)

Query: 37  GTSLRELQFSKNEYSVSALENLPVNYV--LLTVTTNKPRDLRVKYWLSNDYGERFSIS-R 93
           G S+ E+ F +N        N+P   V  +L    +  ++  + Y L +     F+I   
Sbjct: 536 GQSVVEVYFPEN--------NIPGERVATVLATDADSGKNAEIAYSLDSSVMGIFAIDPD 587

Query: 94  QGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELF 150
            GDI +   LD E  D Y F V A D    ++  S TV + V + ND DP+F    +  +
Sbjct: 588 SGDILVNTVLDREQTDRYEFKVNAKDKGIPVLQGSTTVIVQVADKNDNDPKFMQDVFTFY 647

Query: 151 LPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSI-NDSGHI-SIVDLSAL 207
           +      +L P S +G V   D DKG    +SL       +FSI ND+G I S +     
Sbjct: 648 VKE----NLQPNSPVGMVTVMDADKGRNAEMSLYIEENNNIFSIENDTGTIYSTMSFDRE 703

Query: 208 NTSTIQLVVVATDTGNPPRQASV 230
           + +T    V A D G+PPR A+ 
Sbjct: 704 HQTTYTFRVKAVDGGDPPRSATA 726



 Score = 45.8 bits (107), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 81/318 (25%), Positives = 138/318 (43%), Gaps = 50/318 (15%)

Query: 30  TLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVT---TNKPRDLRVKYWLSNDYG 86
           T+IV  A  +  + +F ++ ++    ENL  N  +  VT    +K R+  +  ++  +  
Sbjct: 624 TVIVQVADKNDNDPKFMQDVFTFYVKENLQPNSPVGMVTVMDADKGRNAEMSLYIEEN-N 682

Query: 87  ERFSISRQ-GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRF 142
             FSI    G I      D E + +Y F V A D      + +ATV++ V++ ND  P  
Sbjct: 683 NIFSIENDTGTIYSTMSFDREHQTTYTFRVKAVDGGDPPRSATATVSLFVMDENDNAPTV 742

Query: 143 RYPQ---YELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-D 195
             P+   Y L  P   +      +V+  V A D D G    L+   + G   K+F I+  
Sbjct: 743 TLPKNISYTLLPPSSNVR-----TVVATVLATDSDDGINADLNYSIVGGNPFKLFEIDPT 797

Query: 196 SGHISIV-DLSALNTSTIQLVVVATDTGNPPRQASVPAIMHF--------PEAIVQQASS 246
           SG +S+V  L+  +    +LVV   D+G P +  S   ++H           AI  Q + 
Sbjct: 798 SGVVSLVGKLTQKHYGLHRLVVQVNDSGQPSQ--STTTVVHVFVNESVSNATAIDSQIAR 855

Query: 247 KLN-------SGTSSTVL------IILGVVLIVLGFVIILLILYIHKNKHTKN-NGPPGS 292
            L+       +G  S  +      I++GVV  ++  ++I+LI+ + +   +KN NG    
Sbjct: 856 SLHIPLTQDIAGDPSYEISKQRLSIVIGVVAGIMTVILIILIVVMARYCRSKNKNGYEAG 915

Query: 293 SHSKNDSFLSNVILPEKH 310
                D F      P++H
Sbjct: 916 KKDHEDFF-----TPQQH 928



 Score = 43.1 bits (100), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 41/150 (27%), Positives = 69/150 (46%), Gaps = 26/150 (17%)

Query: 93  RQGDISLMQCLDYETEDSYRFTVY---ATDTLMTTSATVNISVVNVNDWDPRFRYPQYEL 149
           +Q  + +   LD E  DSY  T+      D   ++ A + + + +VND  PRF    YE 
Sbjct: 256 KQPQLIVKGALDREQRDSYELTLRVRDGGDPPRSSQAILRVLITDVNDNSPRFEKSVYEA 315

Query: 150 FLPHIPLADLTPGSVIGKVEAADGDKG---------DRVTLSLRGPYEKMFSIND-SGHI 199
            L      +  PG+ I ++ AAD D G            T S+R    ++  +++ SG +
Sbjct: 316 DLAE----NSAPGTPILQLRAADLDVGVNGQIEYVFGAATESVR----RLLRLDETSGWL 367

Query: 200 SI---VDLSALNTSTIQLVVVATDTGNPPR 226
           S+   +D   +N   ++  V+A D G PP+
Sbjct: 368 SVLHRIDREEVN--QLRFTVMARDRGQPPK 395


>gi|114593508|ref|XP_001134748.1| PREDICTED: protocadherin-7 isoform 2 [Pan troglodytes]
 gi|410223660|gb|JAA09049.1| protocadherin 7 [Pan troglodytes]
 gi|410253298|gb|JAA14616.1| protocadherin 7 [Pan troglodytes]
 gi|410296942|gb|JAA27071.1| protocadherin 7 [Pan troglodytes]
          Length = 1069

 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 62/203 (30%), Positives = 92/203 (45%), Gaps = 21/203 (10%)

Query: 37  GTSLRELQFSKNEYSVSALENLPVNYV--LLTVTTNKPRDLRVKYWLSNDYGERFSIS-R 93
           G S+ E+ F +N        N+P   V  +L    +  ++  + Y L +     F+I   
Sbjct: 536 GQSVVEVYFPEN--------NIPGERVATVLATDADSGKNAEIAYSLDSSVMGIFAIDPD 587

Query: 94  QGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELF 150
            GDI +   LD E  D Y F V A D    ++  S TV + V + ND DP+F    +  +
Sbjct: 588 SGDILVNTVLDREQTDRYEFKVNAKDKGIPVLQGSTTVIVQVADKNDNDPKFMQDVFTFY 647

Query: 151 LPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSI-NDSGHI-SIVDLSAL 207
           +      +L P S +G V   D DKG    +SL       +FSI ND+G I S +     
Sbjct: 648 VKE----NLQPNSPVGMVTVMDADKGRNAEMSLYIEENNNIFSIENDTGTIYSTMSFDRE 703

Query: 208 NTSTIQLVVVATDTGNPPRQASV 230
           + +T    V A D G+PPR A+ 
Sbjct: 704 HQTTYTFRVKAVDGGDPPRSATA 726



 Score = 45.1 bits (105), Expect = 0.054,   Method: Compositional matrix adjust.
 Identities = 77/316 (24%), Positives = 136/316 (43%), Gaps = 46/316 (14%)

Query: 30  TLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVT---TNKPRDLRVKYWLSNDYG 86
           T+IV  A  +  + +F ++ ++    ENL  N  +  VT    +K R+  +  ++  +  
Sbjct: 624 TVIVQVADKNDNDPKFMQDVFTFYVKENLQPNSPVGMVTVMDADKGRNAEMSLYIEEN-N 682

Query: 87  ERFSISRQ-GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRF 142
             FSI    G I      D E + +Y F V A D      + +ATV++ V++ ND  P  
Sbjct: 683 NIFSIENDTGTIYSTMSFDREHQTTYTFRVKAVDGGDPPRSATATVSLFVMDENDNAPTV 742

Query: 143 RYPQ---YELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-D 195
             P+   Y L  P   +      +V+  V A D D G    L+   + G   K+F I+  
Sbjct: 743 TLPKNISYTLLPPSSNVR-----TVVATVLATDSDDGINADLNYSIVGGNPFKLFEIDPT 797

Query: 196 SGHISIV-DLSALNTSTIQLVVVATDTGNPPRQASVPAIMHFPEA------IVQQASSKL 248
           SG +S+V  L+  +    +LVV   D+G P +  +    +   E+      I  Q +  L
Sbjct: 798 SGVVSLVGKLTQKHYGLHRLVVQVNDSGQPSQSTTTLVHVFVNESVSNATVIDSQIARSL 857

Query: 249 NSGTSSTVL-------------IILGVVLIVLGFVIILLILYIHKNKHTKN-NGPPGSSH 294
           ++  +  +              I++GVV  ++  ++I+LI+ + +   +KN NG      
Sbjct: 858 HTPLTQDIAGDPSYEISKQRLSIVIGVVAGIMTVILIILIVVMARYCRSKNKNGYEAGKK 917

Query: 295 SKNDSFLSNVILPEKH 310
              D F      P++H
Sbjct: 918 DHEDFF-----TPQQH 928



 Score = 43.1 bits (100), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 41/160 (25%), Positives = 72/160 (45%), Gaps = 26/160 (16%)

Query: 93  RQGDISLMQCLDYETEDSYRFTVY---ATDTLMTTSATVNISVVNVNDWDPRFRYPQYEL 149
           +Q  + +   LD E  DSY  T+      D   ++ A + + + +VND  PRF    YE 
Sbjct: 256 KQPQLIVKGALDREQRDSYELTLRVRDGGDPPRSSQAILRVLITDVNDNSPRFEKSVYEA 315

Query: 150 FLPHIPLADLTPGSVIGKVEAADGDKG---------DRVTLSLRGPYEKMFSIND-SGHI 199
            L      +  PG+ I ++ AAD D G            T S+R    ++  +++ SG +
Sbjct: 316 DLAE----NSAPGTPILQLRAADLDVGVNGQIEYVFGAATESVR----RLLRLDETSGWL 367

Query: 200 SI---VDLSALNTSTIQLVVVATDTGNPPRQASVPAIMHF 236
           S+   +D   +N   ++  V+A D G PP+      +++ 
Sbjct: 368 SVLHRIDREEVN--QLRFTVMARDRGQPPKTDKATVVLNI 405


>gi|14589933|ref|NP_115832.1| protocadherin-7 isoform b precursor [Homo sapiens]
 gi|119613268|gb|EAW92862.1| BH-protocadherin (brain-heart), isoform CRA_b [Homo sapiens]
          Length = 1072

 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 62/203 (30%), Positives = 92/203 (45%), Gaps = 21/203 (10%)

Query: 37  GTSLRELQFSKNEYSVSALENLPVNYV--LLTVTTNKPRDLRVKYWLSNDYGERFSIS-R 93
           G S+ E+ F +N        N+P   V  +L    +  ++  + Y L +     F+I   
Sbjct: 536 GQSVVEVYFPEN--------NIPGERVATVLATDADSGKNAEIAYSLDSSVMGIFAIDPD 587

Query: 94  QGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELF 150
            GDI +   LD E  D Y F V A D    ++  S TV + V + ND DP+F    +  +
Sbjct: 588 SGDILVNTVLDREQTDRYEFKVNAKDKGIPVLQGSTTVIVQVADKNDNDPKFMQDVFTFY 647

Query: 151 LPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSI-NDSGHI-SIVDLSAL 207
           +      +L P S +G V   D DKG    +SL       +FSI ND+G I S +     
Sbjct: 648 VKE----NLQPNSPVGMVTVMDADKGRNAEMSLYIEENNNIFSIENDTGTIYSTMSFDRE 703

Query: 208 NTSTIQLVVVATDTGNPPRQASV 230
           + +T    V A D G+PPR A+ 
Sbjct: 704 HQTTYTFRVKAVDGGDPPRSATA 726



 Score = 45.8 bits (107), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 78/318 (24%), Positives = 135/318 (42%), Gaps = 50/318 (15%)

Query: 30  TLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVT---TNKPRDLRVKYWLSNDYG 86
           T+IV  A  +  + +F ++ ++    ENL  N  +  VT    +K R+  +  ++  +  
Sbjct: 624 TVIVQVADKNDNDPKFMQDVFTFYVKENLQPNSPVGMVTVMDADKGRNAEMSLYIEEN-N 682

Query: 87  ERFSISRQ-GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRF 142
             FSI    G I      D E + +Y F V A D      + +ATV++ V++ ND  P  
Sbjct: 683 NIFSIENDTGTIYSTMSFDREHQTTYTFRVKAVDGGDPPRSATATVSLFVMDENDNAPTV 742

Query: 143 RYPQ---YELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-D 195
             P+   Y L  P   +      +V+  V A D D G    L+   + G   K+F I+  
Sbjct: 743 TLPKNISYTLLPPSSNVR-----TVVATVLATDSDDGINADLNYSIVGGNPFKLFEIDPT 797

Query: 196 SGHISIV-DLSALNTSTIQLVVVATDTGNPPR--------------------QASVPAIM 234
           SG +S+V  L+  +    +LVV   D+G P +                     + +   +
Sbjct: 798 SGVVSLVGKLTQKHYGLHRLVVQVNDSGQPSQSTTTLVHVFVNESVSNATAIDSQIARSL 857

Query: 235 HFPEAIVQQASSKLNSGTSSTVL-IILGVVLIVLGFVIILLILYIHKNKHTKN-NGPPGS 292
           H P  + Q  +   +   S   L I++GVV  ++  ++I+LI+ + +   +KN NG    
Sbjct: 858 HIP--LTQDIAGDPSYEISKQRLSIVIGVVAGIMTVILIILIVVMARYCRSKNKNGYEAG 915

Query: 293 SHSKNDSFLSNVILPEKH 310
                D F      P++H
Sbjct: 916 KKDHEDFF-----TPQQH 928



 Score = 43.1 bits (100), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 41/160 (25%), Positives = 72/160 (45%), Gaps = 26/160 (16%)

Query: 93  RQGDISLMQCLDYETEDSYRFTVY---ATDTLMTTSATVNISVVNVNDWDPRFRYPQYEL 149
           +Q  + +   LD E  DSY  T+      D   ++ A + + + +VND  PRF    YE 
Sbjct: 256 KQPQLIVKGALDREQRDSYELTLRVRDGGDPPRSSQAILRVLITDVNDNSPRFEKSVYEA 315

Query: 150 FLPHIPLADLTPGSVIGKVEAADGDKG---------DRVTLSLRGPYEKMFSIND-SGHI 199
            L      +  PG+ I ++ AAD D G            T S+R    ++  +++ SG +
Sbjct: 316 DLAE----NSAPGTPILQLRAADLDVGVNGQIEYVFGAATESVR----RLLRLDETSGWL 367

Query: 200 SI---VDLSALNTSTIQLVVVATDTGNPPRQASVPAIMHF 236
           S+   +D   +N   ++  V+A D G PP+      +++ 
Sbjct: 368 SVLHRIDREEVN--QLRFTVMARDRGQPPKTDKATVVLNI 405


>gi|426344011|ref|XP_004038571.1| PREDICTED: protocadherin-7 isoform 3 [Gorilla gorilla gorilla]
          Length = 1069

 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 62/203 (30%), Positives = 92/203 (45%), Gaps = 21/203 (10%)

Query: 37  GTSLRELQFSKNEYSVSALENLPVNYV--LLTVTTNKPRDLRVKYWLSNDYGERFSIS-R 93
           G S+ E+ F +N        N+P   V  +L    +  ++  + Y L +     F+I   
Sbjct: 536 GQSVVEVYFPEN--------NIPGERVATVLATDADSGKNAEIAYSLDSSVMGIFAIDPD 587

Query: 94  QGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELF 150
            GDI +   LD E  D Y F V A D    ++  S TV + V + ND DP+F    +  +
Sbjct: 588 SGDILVNTVLDREQTDRYEFKVNAKDKGIPVLQGSTTVIVQVADKNDNDPKFMQDVFTFY 647

Query: 151 LPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSI-NDSGHI-SIVDLSAL 207
           +      +L P S +G V   D DKG    +SL       +FSI ND+G I S +     
Sbjct: 648 VKE----NLQPNSPVGMVTVMDADKGRNAEMSLYIEENNNIFSIENDTGTIYSTMSFDRE 703

Query: 208 NTSTIQLVVVATDTGNPPRQASV 230
           + +T    V A D G+PPR A+ 
Sbjct: 704 HQTTYTFRVKAVDGGDPPRSATA 726



 Score = 45.1 bits (105), Expect = 0.052,   Method: Compositional matrix adjust.
 Identities = 77/316 (24%), Positives = 136/316 (43%), Gaps = 46/316 (14%)

Query: 30  TLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVT---TNKPRDLRVKYWLSNDYG 86
           T+IV  A  +  + +F ++ ++    ENL  N  +  VT    +K R+  +  ++  +  
Sbjct: 624 TVIVQVADKNDNDPKFMQDVFTFYVKENLQPNSPVGMVTVMDADKGRNAEMSLYIEEN-N 682

Query: 87  ERFSISRQ-GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRF 142
             FSI    G I      D E + +Y F V A D      + +ATV++ V++ ND  P  
Sbjct: 683 NIFSIENDTGTIYSTMSFDREHQTTYTFRVKAVDGGDPPRSATATVSLFVMDENDNAPTV 742

Query: 143 RYPQ---YELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-D 195
             P+   Y L  P   +      +V+  V A D D G    L+   + G   K+F I+  
Sbjct: 743 TLPKNISYTLLPPSSNVR-----TVVATVLATDSDDGINADLNYSIVGGNPFKLFEIDPT 797

Query: 196 SGHISIV-DLSALNTSTIQLVVVATDTGNPPRQASVPAIMHFPEA------IVQQASSKL 248
           SG +S+V  L+  +    +LVV   D+G P +  +    +   E+      I  Q +  L
Sbjct: 798 SGVVSLVGKLTQKHYGLHRLVVQVNDSGQPSQSTTTLVHVFVNESVSNATVIDSQIARSL 857

Query: 249 NSGTSSTVL-------------IILGVVLIVLGFVIILLILYIHKNKHTKN-NGPPGSSH 294
           ++  +  +              I++GVV  ++  ++I+LI+ + +   +KN NG      
Sbjct: 858 HTPLTQDIAGDPSYEISKQRLSIVIGVVAGIMTVILIILIVVMARYCRSKNKNGYEAGKK 917

Query: 295 SKNDSFLSNVILPEKH 310
              D F      P++H
Sbjct: 918 DHEDFF-----TPQQH 928



 Score = 43.1 bits (100), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 41/160 (25%), Positives = 72/160 (45%), Gaps = 26/160 (16%)

Query: 93  RQGDISLMQCLDYETEDSYRFTVY---ATDTLMTTSATVNISVVNVNDWDPRFRYPQYEL 149
           +Q  + +   LD E  DSY  T+      D   ++ A + + + +VND  PRF    YE 
Sbjct: 256 KQPQLIVKGALDREQRDSYELTLRVRDGGDPPRSSQAILRVLITDVNDNSPRFEKSVYEA 315

Query: 150 FLPHIPLADLTPGSVIGKVEAADGDKG---------DRVTLSLRGPYEKMFSIND-SGHI 199
            L      +  PG+ I ++ AAD D G            T S+R    ++  +++ SG +
Sbjct: 316 DLAE----NSAPGTPILQLRAADLDVGVNGQIEYVFGAATESVR----RLLRLDETSGWL 367

Query: 200 SI---VDLSALNTSTIQLVVVATDTGNPPRQASVPAIMHF 236
           S+   +D   +N   ++  V+A D G PP+      +++ 
Sbjct: 368 SVLHRIDREEVN--QLRFTVMARDRGQPPKTDKATVVLNI 405


>gi|402869109|ref|XP_003898612.1| PREDICTED: protocadherin-7 isoform 1 [Papio anubis]
          Length = 1069

 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 62/203 (30%), Positives = 92/203 (45%), Gaps = 21/203 (10%)

Query: 37  GTSLRELQFSKNEYSVSALENLPVNYV--LLTVTTNKPRDLRVKYWLSNDYGERFSIS-R 93
           G S+ E+ F +N        N+P   V  +L    +  ++  + Y L +     F+I   
Sbjct: 536 GQSVVEVYFPEN--------NIPGERVATVLATDADSGKNAEIAYSLDSSVMGIFAIDPD 587

Query: 94  QGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELF 150
            GDI +   LD E  D Y F V A D    ++  S TV + V + ND DP+F    +  +
Sbjct: 588 SGDILVNTVLDREQTDRYEFKVNAKDKGIPVLQGSTTVIVQVADKNDNDPKFMQDVFTFY 647

Query: 151 LPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSI-NDSGHI-SIVDLSAL 207
           +      +L P S +G V   D DKG    +SL       +FSI ND+G I S +     
Sbjct: 648 VKE----NLQPNSPVGMVTVMDADKGRNAEMSLYIEENNNIFSIENDTGTIYSTMSFDRE 703

Query: 208 NTSTIQLVVVATDTGNPPRQASV 230
           + +T    V A D G+PPR A+ 
Sbjct: 704 HQTTYTFRVKAVDGGDPPRSATA 726



 Score = 43.1 bits (100), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 41/160 (25%), Positives = 72/160 (45%), Gaps = 26/160 (16%)

Query: 93  RQGDISLMQCLDYETEDSYRFTVY---ATDTLMTTSATVNISVVNVNDWDPRFRYPQYEL 149
           +Q  + +   LD E  DSY  T+      D   ++ A + + + +VND  PRF    YE 
Sbjct: 256 KQPQLIVKGALDREQRDSYELTLRVRDGGDPPRSSQAILRVLITDVNDNSPRFEKSVYEA 315

Query: 150 FLPHIPLADLTPGSVIGKVEAADGDKG---------DRVTLSLRGPYEKMFSIND-SGHI 199
            L      +  PG+ I ++ AAD D G            T S+R    ++  +++ SG +
Sbjct: 316 DLAE----NSAPGTPILQLRAADLDVGVNGQIEYVFGAATESVR----RLLRLDETSGWL 367

Query: 200 SI---VDLSALNTSTIQLVVVATDTGNPPRQASVPAIMHF 236
           S+   +D   +N   ++  V+A D G PP+      +++ 
Sbjct: 368 SVLHRIDREEVN--QLRFTVMARDRGQPPKTDKATVVLNI 405


>gi|14589931|ref|NP_002580.2| protocadherin-7 isoform a precursor [Homo sapiens]
 gi|254763320|sp|O60245.2|PCDH7_HUMAN RecName: Full=Protocadherin-7; AltName: Full=Brain-heart
           protocadherin; Short=BH-Pcdh; Flags: Precursor
 gi|119613271|gb|EAW92865.1| BH-protocadherin (brain-heart), isoform CRA_e [Homo sapiens]
          Length = 1069

 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 62/203 (30%), Positives = 92/203 (45%), Gaps = 21/203 (10%)

Query: 37  GTSLRELQFSKNEYSVSALENLPVNYV--LLTVTTNKPRDLRVKYWLSNDYGERFSIS-R 93
           G S+ E+ F +N        N+P   V  +L    +  ++  + Y L +     F+I   
Sbjct: 536 GQSVVEVYFPEN--------NIPGERVATVLATDADSGKNAEIAYSLDSSVMGIFAIDPD 587

Query: 94  QGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELF 150
            GDI +   LD E  D Y F V A D    ++  S TV + V + ND DP+F    +  +
Sbjct: 588 SGDILVNTVLDREQTDRYEFKVNAKDKGIPVLQGSTTVIVQVADKNDNDPKFMQDVFTFY 647

Query: 151 LPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSI-NDSGHI-SIVDLSAL 207
           +      +L P S +G V   D DKG    +SL       +FSI ND+G I S +     
Sbjct: 648 VKE----NLQPNSPVGMVTVMDADKGRNAEMSLYIEENNNIFSIENDTGTIYSTMSFDRE 703

Query: 208 NTSTIQLVVVATDTGNPPRQASV 230
           + +T    V A D G+PPR A+ 
Sbjct: 704 HQTTYTFRVKAVDGGDPPRSATA 726



 Score = 45.8 bits (107), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 78/318 (24%), Positives = 135/318 (42%), Gaps = 50/318 (15%)

Query: 30  TLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVT---TNKPRDLRVKYWLSNDYG 86
           T+IV  A  +  + +F ++ ++    ENL  N  +  VT    +K R+  +  ++  +  
Sbjct: 624 TVIVQVADKNDNDPKFMQDVFTFYVKENLQPNSPVGMVTVMDADKGRNAEMSLYIEEN-N 682

Query: 87  ERFSISRQ-GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRF 142
             FSI    G I      D E + +Y F V A D      + +ATV++ V++ ND  P  
Sbjct: 683 NIFSIENDTGTIYSTMSFDREHQTTYTFRVKAVDGGDPPRSATATVSLFVMDENDNAPTV 742

Query: 143 RYPQ---YELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-D 195
             P+   Y L  P   +      +V+  V A D D G    L+   + G   K+F I+  
Sbjct: 743 TLPKNISYTLLPPSSNVR-----TVVATVLATDSDDGINADLNYSIVGGNPFKLFEIDPT 797

Query: 196 SGHISIV-DLSALNTSTIQLVVVATDTGNPPR--------------------QASVPAIM 234
           SG +S+V  L+  +    +LVV   D+G P +                     + +   +
Sbjct: 798 SGVVSLVGKLTQKHYGLHRLVVQVNDSGQPSQSTTTLVHVFVNESVSNATAIDSQIARSL 857

Query: 235 HFPEAIVQQASSKLNSGTSSTVL-IILGVVLIVLGFVIILLILYIHKNKHTKN-NGPPGS 292
           H P  + Q  +   +   S   L I++GVV  ++  ++I+LI+ + +   +KN NG    
Sbjct: 858 HIP--LTQDIAGDPSYEISKQRLSIVIGVVAGIMTVILIILIVVMARYCRSKNKNGYEAG 915

Query: 293 SHSKNDSFLSNVILPEKH 310
                D F      P++H
Sbjct: 916 KKDHEDFF-----TPQQH 928



 Score = 43.1 bits (100), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 41/160 (25%), Positives = 72/160 (45%), Gaps = 26/160 (16%)

Query: 93  RQGDISLMQCLDYETEDSYRFTVY---ATDTLMTTSATVNISVVNVNDWDPRFRYPQYEL 149
           +Q  + +   LD E  DSY  T+      D   ++ A + + + +VND  PRF    YE 
Sbjct: 256 KQPQLIVKGALDREQRDSYELTLRVRDGGDPPRSSQAILRVLITDVNDNSPRFEKSVYEA 315

Query: 150 FLPHIPLADLTPGSVIGKVEAADGDKG---------DRVTLSLRGPYEKMFSIND-SGHI 199
            L      +  PG+ I ++ AAD D G            T S+R    ++  +++ SG +
Sbjct: 316 DLAE----NSAPGTPILQLRAADLDVGVNGQIEYVFGAATESVR----RLLRLDETSGWL 367

Query: 200 SI---VDLSALNTSTIQLVVVATDTGNPPRQASVPAIMHF 236
           S+   +D   +N   ++  V+A D G PP+      +++ 
Sbjct: 368 SVLHRIDREEVN--QLRFTVMARDRGQPPKTDKATVVLNI 405


>gi|158297299|ref|XP_317558.4| AGAP007924-PA [Anopheles gambiae str. PEST]
 gi|157015128|gb|EAA12848.4| AGAP007924-PA [Anopheles gambiae str. PEST]
          Length = 5159

 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 66/252 (26%), Positives = 114/252 (45%), Gaps = 42/252 (16%)

Query: 14   VVRAIQYDNQDRYALATLIVSKAGT-------SLREL---------QFSKNEYSVSALEN 57
            ++RA+  + Q+ Y L TL+    G+       ++R +         +F +  Y  +  EN
Sbjct: 2379 LLRALDREMQEEYIL-TLVAMDTGSPPLTGTGTVRVMVQDINDHNPEFERQSYQATIAEN 2437

Query: 58   LPVN-YVLLTVTTNKPRDL--RVKYWLSNDYGERFSI-SRQGDISLMQCLDYETEDSYRF 113
             P+   VL    T++   L  +++Y L  ++  RF + +  G+I+    LD E    Y F
Sbjct: 2438 QPIGTRVLWPRATDRDAGLNAKIRYTLLGEHSSRFRLDASSGEITTAAVLDCEDMPIYHF 2497

Query: 114  TVYATDTLMT----TSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVE 169
            T+ A D+  T    T   + I V +VND  P F  P + + +P      + PG  +   +
Sbjct: 2498 TLMAQDSSTTEPRATLVNLTIDVQDVNDNSPAFGAPTFHVNVPD----RIKPGQFVFGAK 2553

Query: 170  AADGDKG--DRVTLSLRGPYEKMFSINDSGHISIVD--------LSALNTSTI-QLVVVA 218
            A D D+G   R+  S+ G     F IN+  H  +++        +S  N+  + +L +VA
Sbjct: 2554 AIDRDEGVNARLLYSIVGTDAAKFRINE--HTGVIEAATELSTPMSGANSERVFRLTIVA 2611

Query: 219  TDTGNPPRQASV 230
             D G  PR A+ 
Sbjct: 2612 KDEGYEPRSATC 2623



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 59/240 (24%), Positives = 109/240 (45%), Gaps = 23/240 (9%)

Query: 2    INEDDFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVN 61
            ++ +D  Q  TL+V A+          AT++V+    +    +F++  +SV+  EN  + 
Sbjct: 2806 LDREDIAQ-YTLIVEAVDQGVPQLTGSATVLVNVLDKNDNPPKFTR-LFSVNVTENAEIG 2863

Query: 62   YVLLTVTTNKPR---DLRVKYWLSNDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYA 117
              ++ +T++      +    Y  + + G +FSI S  G++++   LD E +D Y   V A
Sbjct: 2864 QFVIKITSSDSDVGVNANATYIFTENLGGKFSIDSTTGNVTVAGHLDREQQDEYILKVAA 2923

Query: 118  TDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDK-- 175
             D    T   + I++ + ND  P F +  Y      +  +     + +G+V A D DK  
Sbjct: 2924 VDGAWRTETPLTITIQDQNDNAPEFEHSYYSFNFRELQKS----VTFVGQVIATDRDKQG 2979

Query: 176  -GDRVTLSLRGPYEKMFSINDSG---------HISIVDLSALNTSTIQLVVVATDTGNPP 225
                ++ SL+ P + +F+I+ +          H     L A   ++  L V+ATD G PP
Sbjct: 2980 PNSVISYSLQQPSD-LFTIDPATGEIFSKRRIHYKHTQLEASPENSFTLTVLATDNGKPP 3038



 Score = 54.7 bits (130), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 59/185 (31%), Positives = 89/185 (48%), Gaps = 18/185 (9%)

Query: 50   YSVSALENLPVNYVLLTVTTNKPRDL-RVKY-WLSNDYGERFSISRQ-GDISLMQCLDYE 106
            +SVS  E+L V   +  +T   P  L +++Y  L  D  ++F++ R+ G + L   LD E
Sbjct: 1763 FSVS--EDLAVGQTVARITATDPDTLGKLEYALLDGDAPKKFALERETGLLKLRDTLDRE 1820

Query: 107  TEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIG 166
            TEDSYR  V  TD + +T  T+ I + + ND  P F  P Y   +P     +   G  +G
Sbjct: 1821 TEDSYRLKVSVTDGIQSTETTITIQITDTNDNPPVFAEPAYSFDIPE----NAQRGFHVG 1876

Query: 167  KVEAADGDKGDRVTLS---LRGPYEKMFSINDSGHISIVDLSA-LNTSTIQ---LVVVAT 219
             + A D D G    ++   +      +FS+N      I  L+A L+   +Q   LVV A 
Sbjct: 1877 VIAATDPDVGTNAAVTYTVISDWANDVFSLNP--QTGIFTLTARLDYEEVQHYILVVQAQ 1934

Query: 220  DTGNP 224
            D G P
Sbjct: 1935 DNGYP 1939



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 55/191 (28%), Positives = 89/191 (46%), Gaps = 18/191 (9%)

Query: 45   FSKNEYSVSALENLPVN---YVLLTVTTNKPRDLRVKYWLSNDYG-ERFSI-SRQGDISL 99
            F+++ Y     EN P N   Y       + P++  + Y +    G E F+I +  G I+ 
Sbjct: 3273 FNQSVYDAYVAENSPANTFVYRAQAHDRDSPKNAIINYAIVGGSGRELFAIETATGIITS 3332

Query: 100  MQCLDYETEDSYRFTV--YATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLA 157
                DYE +D Y  T+  Y  D+ M     V + V  VN++ P+F  P +     H  ++
Sbjct: 3333 KATFDYEEQDQYTLTLAAYNPDSSMRNETKVIVHVTGVNEYFPKFIQPVF-----HFDVS 3387

Query: 158  DLTP-GSVIGKVEAADGDKGD--RVTLSLRGPY-EKMFSINDSGHISIV--DLSALNTST 211
            +    GS +G +EA D D G+  +V   L G   +K FSI+ S  + +V  +L     S 
Sbjct: 3388 ESAEVGSSVGIIEATDKDAGEDGKVYYLLVGSSNDKGFSIHPSTGVLVVSRNLDRETQSR 3447

Query: 212  IQLVVVATDTG 222
            + L V+A + G
Sbjct: 3448 VVLTVLAKNYG 3458



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 48/170 (28%), Positives = 83/170 (48%), Gaps = 19/170 (11%)

Query: 45   FSKNEYSVSALENL--PVNYVLLTVTT----NKPRDLRVKYWLSNDYGERFSI-SRQGDI 97
            F  + Y    +EN+  P N  ++TV        P + +V+Y+L     + F I +  G+I
Sbjct: 2318 FLDSPYLAYVMENVIPPNNGYVITVRAYDADTPPFNSQVRYFLKEGDTDFFKINASTGEI 2377

Query: 98   SLMQCLDYETEDSYRFTVYATDTL---MTTSATVNISVVNVNDWDPRFRYPQYELFLPHI 154
            SL++ LD E ++ Y  T+ A DT    +T + TV + V ++ND +P F    Y+      
Sbjct: 2378 SLLRALDREMQEEYILTLVAMDTGSPPLTGTGTVRVMVQDINDHNPEFERQSYQ-----A 2432

Query: 155  PLADLTP-GSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIN-DSGHIS 200
             +A+  P G+ +    A D D G   ++  +L G +   F ++  SG I+
Sbjct: 2433 TIAENQPIGTRVLWPRATDRDAGLNAKIRYTLLGEHSSRFRLDASSGEIT 2482



 Score = 45.1 bits (105), Expect = 0.062,   Method: Compositional matrix adjust.
 Identities = 55/233 (23%), Positives = 85/233 (36%), Gaps = 56/233 (24%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWL-SNDYGERFSISRQGDISLM 100
            F    YS    EN P+N  ++TV+    +   + R++Y + + D  E F I   G I   
Sbjct: 1961 FDPMSYSNEIFENAPINSDVVTVSATDIDSGSNGRIEYSITAGDDNEDFQIMSNGTIRTR 2020

Query: 101  QCLDYETEDSYRFTVYATDTLM-------------------------------------- 122
            + LD ET+ SY   V A D                                         
Sbjct: 2021 RALDRETKSSYSLVVTARDCAKEPEKRLSSTVQVAAADCCKILHTFTLSCSSYHHHSTYL 2080

Query: 123  --TTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVT 180
               T   V I + ++ND  P F  P       +IP     P +VI  ++A D D+G    
Sbjct: 2081 SHATHTQVTIVLKDINDLAPEFVTPNETSVAENIP-----PNTVIMAIKAVDRDEGRNGY 2135

Query: 181  LSL-----RGPYEKMFSINDSGHISIV--DLSALNTSTIQLVVVATDTGNPPR 226
            +       +G     F++  +  +  V   L      + +L V+A D G+PPR
Sbjct: 2136 VEYQLEDDQGSLPSPFTVGQADGLLRVSGQLDREAKPSYELNVIAKDRGDPPR 2188



 Score = 39.3 bits (90), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 57/226 (25%), Positives = 101/226 (44%), Gaps = 31/226 (13%)

Query: 17   AIQYDNQDRYALATLIVSKA-GTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDL 75
            A+Q + +   A  T++ + A G+S     F+K + S S  EN P+   +LTV+       
Sbjct: 1617 AVQAERKSSDAYITILTTGAPGSSSSGPVFAKKDLSGSVSENEPIGTSILTVSAYLNSVS 1676

Query: 76   RVKYWLSN--------DYGERFSI-SRQGDISLMQCLDYETE-DSYRFTVYAT---DTLM 122
             ++Y+++N             F I ++ G +S    LD E   + Y   VYA        
Sbjct: 1677 DIEYYVTNVTSGSNGRQVNRLFDIDTKLGILSTAAELDREAGIEHYDVEVYAVAVGTVPR 1736

Query: 123  TTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLA-----DLTPGSVIGKVEAADGDKGD 177
            TTS  + ++V++ ND  P+F+         ++PL      DL  G  + ++ A D D   
Sbjct: 1737 TTSTRIRVNVLDKNDSPPKFQ---------NLPLVFSVSEDLAVGQTVARITATDPDTLG 1787

Query: 178  RVTLS-LRGPYEKMFSIN-DSGHISIVD-LSALNTSTIQLVVVATD 220
            ++  + L G   K F++  ++G + + D L      + +L V  TD
Sbjct: 1788 KLEYALLDGDAPKKFALERETGLLKLRDTLDRETEDSYRLKVSVTD 1833



 Score = 38.9 bits (89), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 40/129 (31%), Positives = 60/129 (46%), Gaps = 12/129 (9%)

Query: 103  LDYETEDSYRFTVYATDTLMTTSATVNISVVNV---NDWDPRFRYPQYELFLPHIPLADL 159
            LDYE    Y   + A D+   +  +V   +VNV   ND  P    P Y   +    L + 
Sbjct: 2703 LDYERHQQYEVWIEAADSDRPSLRSVLQLIVNVTDANDNAPVMDRPMYVAEV----LEEE 2758

Query: 160  TPGSVIGKVEAADGD--KGDRVTLSLRGPYEKMFSIN-DSGHI-SIVDLSALNTSTIQLV 215
            +P  ++ KV A+D D  +  ++T  LR  +E  F IN D+G I +   L   + +   L+
Sbjct: 2759 SPSQLVTKVSASDADSEENGQITYRLRDDFES-FEINTDTGEIYTTTRLDREDIAQYTLI 2817

Query: 216  VVATDTGNP 224
            V A D G P
Sbjct: 2818 VEAVDQGVP 2826



 Score = 38.1 bits (87), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 48/87 (55%), Gaps = 9/87 (10%)

Query: 95  GDISLMQCLDYETEDSYRFTVYATDTL---MTTSATVNISVVNVNDWDPRFRYPQYELFL 151
           G I+  + LD E   +Y   V A D      ++SATV+++V + ND  P   YP+   F 
Sbjct: 610 GQIATRRALDRELVAAYTLVVIARDHGSPPQSSSATVSVAVEDANDNSPEL-YPR--AFF 666

Query: 152 PHIPLADLTP-GSVIGKVEAADGDKGD 177
             +P+A+  P G++I ++ A D D+G+
Sbjct: 667 --VPVAEDAPEGTLIAQLTATDRDEGE 691



 Score = 37.7 bits (86), Expect = 9.9,   Method: Compositional matrix adjust.
 Identities = 49/150 (32%), Positives = 70/150 (46%), Gaps = 9/150 (6%)

Query: 81  LSNDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWD 139
           +  D    F I  R G IS  + +D E    YR TV A + L     TVN++VV+VND  
Sbjct: 822 VRGDSAASFRIHERTGVISTARHIDREQRALYRLTVAARNGLAYGETTVNVTVVDVNDNA 881

Query: 140 PRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDSG 197
           P F Y   E+ LP     +   G  +   +A D D G   +V   L    E +F I ++ 
Sbjct: 882 PAFLYEHDEIRLPE----NAAVGQEVYVAKAKDADTGANSQVRFGLSSNPEGLFRIAETS 937

Query: 198 HISIVDLS-ALNTSTI-QLVVVATDTGNPP 225
            +  ++ S  +   T+  L V ATD G+PP
Sbjct: 938 GVIYLNRSIGVEPGTVLSLEVSATDGGSPP 967


>gi|395535535|ref|XP_003769780.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 2
           [Sarcophilus harrisii]
          Length = 2694

 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 72/231 (31%), Positives = 108/231 (46%), Gaps = 26/231 (11%)

Query: 15  VRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTT---NK 71
           V A  +    R ALATL ++   T+     F ++EY  S  ENL V Y +LTV     + 
Sbjct: 279 VTAQDHGTPRRSALATLTITVTDTNDHNPVFEQSEYKESLRENLEVGYEVLTVRATDGDA 338

Query: 72  PRDLRVKYWLSNDYG----ERFSIS-RQGDISLMQCLDYETEDSYRFTVYATDT-----L 121
           P +  + Y L    G    E F I  R G I     +D E  +SY+ TV A+D       
Sbjct: 339 PPNANILYRLVEGPGGPPPEVFEIDPRSGVIRTRGPVDREAVESYQLTVEASDQGRDPGP 398

Query: 122 MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTL 181
            + +ATV +SV + ND  P+F   +Y + +      D+TPG+ + +V A D DKG    +
Sbjct: 399 RSATATVCLSVEDDNDNAPQFSEKRYVVQV----REDVTPGAPVLRVTATDRDKGSNALV 454

Query: 182 S---LRGPYEKMFSIN-DSGHISIVDLSALNTSTIQ---LVVVATDTGNPP 225
               + G     F ++  +G + +V  S L+  T +   L + A D G PP
Sbjct: 455 HYSIMSGNARGQFYLDAQTGALDVV--SPLDYETAKEYTLRIRAQDGGRPP 503



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 47/171 (27%), Positives = 80/171 (46%), Gaps = 15/171 (8%)

Query: 45  FSKNEYSVSALENLPVNYVLL---TVTTNKPRDLRVKYWLSNDYGERFSIS---RQGDIS 98
           F    +  + LE++P+ Y++L    +  +   + R++Y L+   G  F  +     G IS
Sbjct: 525 FVSTPFQATVLESVPLGYLVLHIQAIDADAGDNARLEYRLAG-VGPDFPFTINNGTGWIS 583

Query: 99  LMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIP 155
           +   LD E  D Y F V A D     +T SA+V++++++VND +P F  P+Y + L    
Sbjct: 584 VAAELDREEVDFYSFGVEARDHGTPPLTASASVSVTILDVNDNNPTFTQPEYAVRLNE-- 641

Query: 156 LADLTPGSVIGKVEAADGDKGDRVTLSL-RGPYEKMFSINDSGHISIVDLS 205
             D   G+ +  V A D D    +T  +  G     FSI       ++ L+
Sbjct: 642 --DAAVGTSVVTVSAVDRDAHSVITYQIASGNTRNRFSITSQSGGGLISLA 690



 Score = 47.4 bits (111), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 52/191 (27%), Positives = 86/191 (45%), Gaps = 22/191 (11%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWL-SNDYGERFSIS-RQGDISL 99
            F ++E+ V   EN P+   +  VT   P +    ++ Y +   +  E F +    G+++ 
Sbjct: 912  FEQDEFDVFVEENSPIGLAVARVTATDPDEGTNAQIMYQIVEGNIPEVFQLDIFSGELTA 971

Query: 100  MQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPH--IPLA 157
            +  LDYET   Y   + AT   + + ATV++ +++ ND  P      +E+   +     +
Sbjct: 972  LVDLDYETRAEYVLVIQATSAPLVSRATVHVRLLDRNDNPPVLG--NFEILFNNYVTNRS 1029

Query: 158  DLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSGHISIVDLSALNTSTIQLVVV 217
               PG  IG+V A D D  D  TLS        +S      +S+V    LNTST +L + 
Sbjct: 1030 SSFPGGAIGRVPAHDPDVSD--TLS--------YSFERGNELSLV---LLNTSTGELRLS 1076

Query: 218  ATDTGNPPRQA 228
                 N P +A
Sbjct: 1077 KALDNNRPLEA 1087



 Score = 40.8 bits (94), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 36/109 (33%), Positives = 54/109 (49%), Gaps = 7/109 (6%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRDLR--VKYWL-SNDYGERFSISRQ---GDIS 98
           F++ EY+V   E+  V   ++TV+    RD    + Y + S +   RFSI+ Q   G IS
Sbjct: 630 FTQPEYAVRLNEDAAVGTSVVTVSAVD-RDAHSVITYQIASGNTRNRFSITSQSGGGLIS 688

Query: 99  LMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQY 147
           L   LDY+ E  Y   V A+D     +A V ++V + N   P F+   Y
Sbjct: 689 LALPLDYKLERQYVLAVTASDGTRQDTAQVVVNVTDANTHRPVFQSSHY 737


>gi|347543909|gb|AEP02527.1| CDH23, partial [Chaerephon plicatus]
          Length = 3209

 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 61/195 (31%), Positives = 92/195 (47%), Gaps = 20/195 (10%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWLSNDYGERFSIS-RQGDISLM 100
            F +  Y  +  E++PV  V+LTVT           ++Y L +  G +F+I+   GDI ++
Sbjct: 2392 FDQPSYQEAVYEDVPVGTVILTVTATDADSGNFALIEYSLGDGEG-KFAINPTTGDIYVL 2450

Query: 101  QCLDYETEDSYRFTVYATD-------TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
              LD E +D Y  T  A D            S  V I V++VND  P+F  PQ+   +  
Sbjct: 2451 SPLDREKKDHYILTALAKDNPGDVASNRRENSVQVVIQVLDVNDCRPQFSKPQFSTSV-- 2508

Query: 154  IPLADLTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSIN-DSGHISIVDLSALNTS 210
                +   G+ +  + A D D+G    +T SL GP E+ F ++ DSG ++       +  
Sbjct: 2509 --YENEPAGTSVITMMATDQDEGSNGELTYSLEGPGEEAFHVDMDSGLVT-TKRPLHSYE 2565

Query: 211  TIQLVVVATDTGNPP 225
               L VVATD G PP
Sbjct: 2566 RFNLTVVATDGGEPP 2580



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 65/210 (30%), Positives = 98/210 (46%), Gaps = 28/210 (13%)

Query: 45  FSKNEYSVSALENLPVNYVLLTV--TTNKPRDL-RVKYWLSNDYGERFSISRQ-GDISLM 100
           FS+  Y+VS  EN+ V   +LTV  T N       V Y+ S+D  +RFS+ +  G I L+
Sbjct: 450 FSQPLYNVSLYENVTVGTSVLTVLATDNDVGTFGEVNYFFSDD-PDRFSLDKDTGLIMLI 508

Query: 101 QCLDYETEDSYRFTVYATDTL-MTTSATVNISVVNVNDWDPRFRYPQYELFL----PHIP 155
             LDYE    +  TV A D     T+  V I+V++VND  P F+   Y   L    P + 
Sbjct: 509 AKLDYELIQRFTLTVIARDGGGEETTGRVRINVLDVNDNVPTFQKDAYVGALRENEPSV- 567

Query: 156 LADLTPGSVIGKVEAADGDK--GDRVTLSL-----RGPYEKMFSINDSGHISI---VDLS 205
                  + + ++ A D D    +++T S+      G Y  +      G IS+   +D  
Sbjct: 568 -------TQLVRLRATDEDSPPNNQITYSIVNASAFGSYFDISVYEGYGVISVSRPLDYE 620

Query: 206 ALNTSTIQLVVVATDTGNPPRQASVPAIMH 235
            +    I L V+A D GNPP  ++VP  + 
Sbjct: 621 QIPNGLIYLTVMAKDAGNPPLNSTVPVTIE 650



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 68/218 (31%), Positives = 101/218 (46%), Gaps = 44/218 (20%)

Query: 45  FSKNEYSVSALENLPVNY-VLLTVTTNKPRDLRVKYWLSNDYGE-----------RFSI- 91
           FSK  Y VS +EN+     VL    T+  R        S +YG+           +F I 
Sbjct: 661 FSKPAYFVSVVENIMAGATVLFLNATDLDR--------SREYGQESIIYSLEGSSQFRIG 712

Query: 92  SRQGDISLMQCLDYETEDSYRFTVYATD-----TLMTTSATVNISVVNVNDWDPRFRYPQ 146
           +R G+++    LD E +  Y   V A D        T  ATVNI+++++ND  P ++   
Sbjct: 713 ARSGELTTTSLLDREAKSEYILIVRAVDGGVGHNQKTGIATVNITLLDINDNHPTWKDAP 772

Query: 147 YELFLPHIPLADLT-PGSVIGKVEAADGDKGDRVTL--SLRGPYEKMFSINDS-GHIS-- 200
           Y     +I L ++T P S +  V A D D G+  TL  S++ P  K +S+N S G I   
Sbjct: 773 Y-----YINLVEMTPPDSDVTTVVAVDPDLGENGTLVYSIQPP-NKFYSLNSSTGKIRTT 826

Query: 201 --IVDLSALNTSTIQL----VVVATDTGNPPRQASVPA 232
             ++D    +    +L    VV  TD GNPP +A+  A
Sbjct: 827 HVMLDRENPDPHEAELMRKIVVSVTDCGNPPLRATSSA 864



 Score = 47.0 bits (110), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 45/141 (31%), Positives = 64/141 (45%), Gaps = 15/141 (10%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDY---GERFSI-SRQGDISLM 100
           F    YSV   EN PV   +  V    P DL     +   +      F+I S +G ++++
Sbjct: 124 FHNQPYSVRIPENTPVGTPIFIVNATDP-DLGAGGSVLYSFQPPSPFFAIDSARGIVTVI 182

Query: 101 QCLDYETEDSYRFTVYATDT----LMTTSATVNISVVNVNDWDPRF-RYPQYELFLPHIP 155
           Q LDYE   +Y+ TV ATD      ++T A + I + +V D DP F   P       H P
Sbjct: 183 QELDYEITQAYQLTVNATDQDKTRPLSTLANLAIIITDVQDMDPIFINLPYSTNIYEHSP 242

Query: 156 LADLTPGSVIGKVEAADGDKG 176
                PG+ +  + A D DKG
Sbjct: 243 -----PGTTVRVITAIDQDKG 258



 Score = 43.9 bits (102), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 59/205 (28%), Positives = 91/205 (44%), Gaps = 27/205 (13%)

Query: 43   LQFSKNEYSVSALENLPVNYVLLTVTTNKPRDL-----RVKYWLSNDYGERFSI-SRQGD 96
            +QFS   Y  + LENL +   ++ V      ++     R   + S      F I +  G 
Sbjct: 1301 VQFSNASYEAAILENLALGTEIVRVQAYSIDNINQITYRFDAYTSAQAKALFKIDAYTGV 1360

Query: 97   ISLMQCLDYETEDSYRFTVYATDTLMTTSATVN--ISVVNVNDWDPRF-RYPQYELFLPH 153
            I++   +D E  D Y  TV A D      +TV   I+V++ ND  PRF       + +P 
Sbjct: 1361 ITVKGLVDREKGDFYTLTVVADDGGPKVDSTVKVYITVLDENDNSPRFDSTSDSAVSVPE 1420

Query: 154  IPLADLTPGSVIGKVEAADGDKGD--RVTLSLR-----GPYEKMFSINDS-GHISI---V 202
                D   G  +  V+A D D G   +V  SL      G +E + + NDS G + +   +
Sbjct: 1421 ----DCPVGQRVATVKARDPDAGSNGQVVFSLASGNIAGAFE-IVTTNDSIGEVFVARPL 1475

Query: 203  DLSALNTSTIQLVVVATDTGNPPRQ 227
            D   L+   ++  VVA+D G PPR+
Sbjct: 1476 DREELDYYILK--VVASDRGTPPRK 1498



 Score = 43.5 bits (101), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 62/235 (26%), Positives = 106/235 (45%), Gaps = 45/235 (19%)

Query: 65   LTVTTNKPRDLRVKYWLS---NDYG---------------ERFSIS-RQGDISLMQCLDY 105
            ++V+ + PRD RV  WL+   ND G                +FS+  R   +  +  LD 
Sbjct: 992  VSVSEDVPRDFRV-VWLNCTDNDVGLNAELSYFVTGGNVDGKFSVGYRDAVVRTVVNLDR 1050

Query: 106  ETEDSYRFTVYATDT-----LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLT 160
            ET  +Y   + A D        T +AT  ++V++VND  P F    YE  +P     D+ 
Sbjct: 1051 ETTAAYTLILEAIDNGPVGKRRTGTATAFVTVLDVNDNRPIFLQSSYEASVPE----DIP 1106

Query: 161  PGSVIGKVEAADGDKGD--RVTLS-LRGPYEKMFSINDSGHISIVDLSALNT---STIQL 214
             G  I +++A D D+G+  RV    L+G +   F I+ S  + +     L+    S+  L
Sbjct: 1107 EGHSIVQLKATDADEGEFGRVWYRILQGNHGNNFRIHVSDGLLMRGPQPLDREQDSSHVL 1166

Query: 215  VVVATDTGNPPRQASVPAIMHFPE------AIVQQASSKL----NSGTSSTVLII 259
            +V A +    P ++SV  I++  +         QQ  S+L     +G  ++V+++
Sbjct: 1167 MVEAYNHDLGPMRSSVRVIVYVEDVNDEAPVFTQQQYSRLALRETAGIGTSVIVV 1221



 Score = 41.2 bits (95), Expect = 0.82,   Method: Compositional matrix adjust.
 Identities = 52/197 (26%), Positives = 88/197 (44%), Gaps = 24/197 (12%)

Query: 44  QFSKNEYSVSALENLPVNYVL----LTVTTNKPRDLRVKYWLSNDYGERF-----SISRQ 94
           +F+ +EYSV+  E   V + L      V  ++  +   + +L  +    F     S+  +
Sbjct: 339 EFNSSEYSVAITELAQVGFALPLFIQVVDKDEGLNSMFEVYLVGNNSHHFIISPTSVQGK 398

Query: 95  GDISLMQC--LDYETEDSYRFTVYATDTL--MTTSATVNISVVNVNDWDPRFRYPQYELF 150
            DI +     LDYET + Y F ++A +++      A V I+++N ND  P F  P Y + 
Sbjct: 399 ADIRVRVAIPLDYETVNRYDFDLFANESVPDHVGYAKVKITLINENDNRPIFSQPLYNVS 458

Query: 151 LPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDSGHISIVDLSALN 208
           L      ++T G+ +  V A D D G    V        ++     D+G I ++  + L+
Sbjct: 459 L----YENVTVGTSVLTVLATDNDVGTFGEVNYFFSDDPDRFSLDKDTGLIMLI--AKLD 512

Query: 209 TSTIQ---LVVVATDTG 222
              IQ   L V+A D G
Sbjct: 513 YELIQRFTLTVIARDGG 529



 Score = 40.0 bits (92), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 68/287 (23%), Positives = 121/287 (42%), Gaps = 63/287 (21%)

Query: 4    EDDFL-QPITLVVRA----IQYDNQDRYALATLIVSKAGTS-----------LRELQFSK 47
            +D FL  PIT V+R     I  + Q+ Y L T++ S  GT            + ++   +
Sbjct: 2103 QDRFLIHPITGVIRVGNVTIDREEQESYRL-TVVASDRGTVPLSGTVVITILIDDVNDCR 2161

Query: 48   NEY-----SVSALENLPVNYVLLTVTTNKPRDL--RVKYWL----SNDYGER-------- 88
             E+     +VS LE+     V+  VT    RDL  +++Y +    + D  +R        
Sbjct: 2162 PEFLNPIQTVSVLESAEPGTVIANVTAID-RDLNPKLEYHIISIVAKDDTDRLVPHQEDA 2220

Query: 89   FSIS-RQGDISLMQCLDYETEDSYRFTVYATD--------TLMTTSATVNISVVNVNDWD 139
            F+++   G + +   L+ E   +Y  TV   D        ++   +A + +++++VND  
Sbjct: 2221 FAVNINTGSVMVKSPLNRELVATYEVTVSVIDNASDLPERSVSVPNAKLTVNILDVNDNT 2280

Query: 140  PRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSGHI 199
            P+F+      +   I L   TPG+ +  V A D DKG    ++       +  +   G++
Sbjct: 2281 PQFKPFGITYYTEKI-LEGATPGTTLIAVAAVDPDKGLNGLITY-----TLLDLMPPGYV 2334

Query: 200  SIVDLSA-----------LNTSTIQLVVVATDTGNPPRQASVPAIMH 235
             + D SA                +   V A+D G+PPR A +P  + 
Sbjct: 2335 QLEDSSAGKVIANWTVDYEEVHWLNFTVRASDNGSPPRAAEIPVYLE 2381



 Score = 38.5 bits (88), Expect = 6.0,   Method: Compositional matrix adjust.
 Identities = 34/107 (31%), Positives = 47/107 (43%), Gaps = 8/107 (7%)

Query: 92   SRQGDISLMQCLDYETEDSYRFTVYATDTLMTTSAT---VNISVVNVNDWDPRFRYPQYE 148
            S  G +     +DYE      FTV A+D      A    V + +V+VND +P F  P Y+
Sbjct: 2339 SSAGKVIANWTVDYEEVHWLNFTVRASDNGSPPRAAEIPVYLEIVDVNDNNPIFDQPSYQ 2398

Query: 149  LFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSIN 194
                     D+  G+VI  V A D D G+   +    G  E  F+IN
Sbjct: 2399 ----EAVYEDVPVGTVILTVTATDADSGNFALIEYSLGDGEGKFAIN 2441


>gi|149726254|ref|XP_001504074.1| PREDICTED: protocadherin gamma-A5 [Equus caballus]
          Length = 814

 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 61/194 (31%), Positives = 88/194 (45%), Gaps = 17/194 (8%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWLSND---YGERFSI-SRQGDI 97
           F+++EY VS  EN+PV   LLT+T   P +    ++ Y   N+     E F + S  G+I
Sbjct: 242 FTQSEYRVSVPENIPVGTRLLTLTATDPDEGINGKLTYSFRNEEDKISETFQLDSNLGEI 301

Query: 98  SLMQCLDYETEDSYRFTVYATD-TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
           S +Q LDYE    Y   V A D   +  SA V ++V +VND  P          +P    
Sbjct: 302 STVQSLDYEEFRFYVMEVVAQDGGALLASAKVLVTVQDVNDNVPEVILTSLTSSVPE--- 358

Query: 157 ADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDS--GHISIVDLSALNTSTI-- 212
            D  PG+VI      DGD G+   ++   P    F +  S   +  ++   AL+   I  
Sbjct: 359 -DCLPGTVIALFSVHDGDSGENGEIACSIPRNLPFKLEKSVGNYYHLLTTRALDREGISD 417

Query: 213 -QLVVVATDTGNPP 225
             + V   D GNPP
Sbjct: 418 YNITVTVIDRGNPP 431



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 72/279 (25%), Positives = 121/279 (43%), Gaps = 45/279 (16%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKP---RDLRVKYWLSNDYGERFSISR-------Q 94
           F +  YS    EN P    + +VT + P    + +V Y L+ D  +   +S         
Sbjct: 452 FPQTRYSTYIPENNPRGISIFSVTAHDPDSGSNAQVTYSLAKDTFQEMPLSSYVSINSDT 511

Query: 95  GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFL 151
           G +  +   DYE     +  V A+D+    ++++ +++I V++ ND  P   YP     L
Sbjct: 512 GVLYALGSFDYEQVGDLQLWVIASDSGDPPLSSNVSLSIFVLDQNDNVPEILYPS----L 567

Query: 152 P-----HIPLADLT--PGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-DSGHI- 199
           P      + LA  +  PG ++ KV A D D G    LS   L+     +F++   +G + 
Sbjct: 568 PTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKASEPGLFTVGLHTGEVR 627

Query: 200 ---SIVDLSALNTSTIQLVVVATDTGNPPRQASVPAIM----HFPEAIVQQAS--SKLNS 250
              +++D  AL  S   LVV   D G PP  A+V   +    + P+ +    S     N 
Sbjct: 628 TARALLDRDALKQS---LVVAVQDHGQPPLSATVTLTVAIADNIPDVLADLGSLEPSANP 684

Query: 251 GTSSTVLIILGVV----LIVLGFVIILLILYIHKNKHTK 285
             SS  L ++  V     + L FVI+LL L + +   ++
Sbjct: 685 DNSSLTLYLVVAVAAVSCVFLAFVIVLLALRLRRWHRSR 723



 Score = 38.5 bits (88), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 65/143 (45%), Gaps = 17/143 (11%)

Query: 101 QCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLA 157
           + LD E    Y  TV   D     ++T   +++ V ++ND  P F   +Y  ++P     
Sbjct: 408 RALDREGISDYNITVTVIDRGNPPLSTENHISLKVADINDNPPIFPQTRYSTYIPE---- 463

Query: 158 DLTPGSVIGKVEAADGDKGD--RVTLSL------RGPYEKMFSIN-DSGHI-SIVDLSAL 207
           +   G  I  V A D D G   +VT SL        P     SIN D+G + ++      
Sbjct: 464 NNPRGISIFSVTAHDPDSGSNAQVTYSLAKDTFQEMPLSSYVSINSDTGVLYALGSFDYE 523

Query: 208 NTSTIQLVVVATDTGNPPRQASV 230
               +QL V+A+D+G+PP  ++V
Sbjct: 524 QVGDLQLWVIASDSGDPPLSSNV 546


>gi|109073954|ref|XP_001085483.1| PREDICTED: protocadherin-7 isoform 2 [Macaca mulatta]
          Length = 1069

 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 62/203 (30%), Positives = 92/203 (45%), Gaps = 21/203 (10%)

Query: 37  GTSLRELQFSKNEYSVSALENLPVNYV--LLTVTTNKPRDLRVKYWLSNDYGERFSIS-R 93
           G S+ E+ F +N        N+P   V  +L    +  ++  + Y L +     F+I   
Sbjct: 536 GQSVVEVYFPEN--------NIPGERVATVLATDADSGKNAEIAYSLDSSVMGIFAIDPD 587

Query: 94  QGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELF 150
            GDI +   LD E  D Y F V A D    ++  S TV + V + ND DP+F    +  +
Sbjct: 588 SGDILVNTVLDREQTDRYEFKVNAKDKGIPVLQGSTTVIVQVADKNDNDPKFMQDVFTFY 647

Query: 151 LPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSI-NDSGHI-SIVDLSAL 207
           +      +L P S +G V   D DKG    +SL       +FSI ND+G I S +     
Sbjct: 648 VKE----NLQPNSPVGMVTVMDADKGRNAEMSLYIEENNNIFSIENDTGTIYSTMSFDRE 703

Query: 208 NTSTIQLVVVATDTGNPPRQASV 230
           + +T    V A D G+PPR A+ 
Sbjct: 704 HQTTYTFRVKAVDGGDPPRSATA 726



 Score = 43.1 bits (100), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 41/160 (25%), Positives = 72/160 (45%), Gaps = 26/160 (16%)

Query: 93  RQGDISLMQCLDYETEDSYRFTVY---ATDTLMTTSATVNISVVNVNDWDPRFRYPQYEL 149
           +Q  + +   LD E  DSY  T+      D   ++ A + + + +VND  PRF    YE 
Sbjct: 256 KQPQLIVKGALDREQRDSYELTLRVRDGGDPPRSSQAILRVLITDVNDNSPRFEKSVYEA 315

Query: 150 FLPHIPLADLTPGSVIGKVEAADGDKG---------DRVTLSLRGPYEKMFSIND-SGHI 199
            L      +  PG+ I ++ AAD D G            T S+R    ++  +++ SG +
Sbjct: 316 DLAE----NSAPGTPILQLRAADLDVGVNGQIEYVFGAATESVR----RLLRLDETSGWL 367

Query: 200 SI---VDLSALNTSTIQLVVVATDTGNPPRQASVPAIMHF 236
           S+   +D   +N   ++  V+A D G PP+      +++ 
Sbjct: 368 SVLHRIDREEVN--QLRFTVMARDRGQPPKTDKATVVLNI 405


>gi|338723487|ref|XP_001917378.2| PREDICTED: LOW QUALITY PROTEIN: protocadherin-7 [Equus caballus]
          Length = 1138

 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 62/203 (30%), Positives = 92/203 (45%), Gaps = 21/203 (10%)

Query: 37  GTSLRELQFSKNEYSVSALENLPVNYV--LLTVTTNKPRDLRVKYWLSNDYGERFSIS-R 93
           G S+ E+ F +N        N+P   V  +L    +  ++  + Y L +     F+I   
Sbjct: 419 GQSVVEVYFPEN--------NIPGERVATVLATDADSGKNAEIAYSLESSVMGIFAIDPD 470

Query: 94  QGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELF 150
            GDI +   LD E  D Y F V A D    ++  S TV + V + ND DP+F    +  +
Sbjct: 471 SGDILVNTVLDREQTDRYEFKVNAKDKGIPVLQGSTTVIVQVADKNDNDPKFMQDVFTFY 530

Query: 151 LPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSI-NDSGHI-SIVDLSAL 207
           +      +L P S +G V   D DKG    +SL       +FSI ND+G I S +     
Sbjct: 531 VKE----NLQPNSPVGMVTVMDADKGRNAEMSLYIEENSNIFSIENDTGTIYSTMSFDRE 586

Query: 208 NTSTIQLVVVATDTGNPPRQASV 230
           + +T    V A D G+PPR A+ 
Sbjct: 587 HQTTYTFRVKAVDGGDPPRSATA 609



 Score = 44.7 bits (104), Expect = 0.083,   Method: Compositional matrix adjust.
 Identities = 77/316 (24%), Positives = 136/316 (43%), Gaps = 46/316 (14%)

Query: 30  TLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVT---TNKPRDLRVKYWLSNDYG 86
           T+IV  A  +  + +F ++ ++    ENL  N  +  VT    +K R+  +  ++  +  
Sbjct: 507 TVIVQVADKNDNDPKFMQDVFTFYVKENLQPNSPVGMVTVMDADKGRNAEMSLYIEEN-S 565

Query: 87  ERFSISRQ-GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRF 142
             FSI    G I      D E + +Y F V A D      + +ATV++ V++ ND  P  
Sbjct: 566 NIFSIENDTGTIYSTMSFDREHQTTYTFRVKAVDGGDPPRSATATVSLFVMDENDNAPTV 625

Query: 143 RYPQ---YELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIND- 195
             P+   Y L  P   +      +V+  V A D D G    L+   + G   K+F I+  
Sbjct: 626 TLPRNISYTLLPPSSNVR-----TVVATVLATDSDDGINADLNYSIVGGNPFKLFEIDST 680

Query: 196 SGHISIV-DLSALNTSTIQLVVVATDTGNPPRQASVPAIMHFPEA------IVQQASSKL 248
           SG +S+V  L+  +    +LVV   D+G P +  +    +   E+      I  Q +  L
Sbjct: 681 SGVVSLVGKLTHKHYGLHRLVVQVNDSGQPSQSTTTLVHVFVNESVSNATVIDSQIARSL 740

Query: 249 NSGTSSTVL-------------IILGVVLIVLGFVIILLILYIHKNKHTKN-NGPPGSSH 294
           ++  +  +              I++GVV  ++  ++I+LI+ + +   +KN NG      
Sbjct: 741 HTPLTQDIAGDPSYEISKQRLSIVIGVVAGIMTVILIILIVVMARYCRSKNKNGYEAGKK 800

Query: 295 SKNDSFLSNVILPEKH 310
              D F      P++H
Sbjct: 801 DHEDFF-----TPQQH 811



 Score = 43.1 bits (100), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 41/150 (27%), Positives = 69/150 (46%), Gaps = 26/150 (17%)

Query: 93  RQGDISLMQCLDYETEDSYRFTVY---ATDTLMTTSATVNISVVNVNDWDPRFRYPQYEL 149
           +Q  + +   LD E  DSY  T+      D   ++ A + + + +VND  PRF    YE 
Sbjct: 139 KQPQLIVKGALDREQRDSYELTLRVRDGGDPPRSSQAILRVLITDVNDNSPRFEKSVYEA 198

Query: 150 FLPHIPLADLTPGSVIGKVEAADGDKG---------DRVTLSLRGPYEKMFSIND-SGHI 199
            L      +  PG+ I ++ AAD D G            T S+R    ++  +++ SG +
Sbjct: 199 DLAE----NSAPGTPILQLRAADLDVGVNGQIEYVFGAATESVR----RLLRLDETSGWL 250

Query: 200 SI---VDLSALNTSTIQLVVVATDTGNPPR 226
           S+   +D   +N   ++  V+A D G PP+
Sbjct: 251 SVLHRIDREEVN--QLRFTVMARDRGQPPK 278


>gi|326914711|ref|XP_003203666.1| PREDICTED: cadherin-23-like [Meleagris gallopavo]
          Length = 2399

 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 63/200 (31%), Positives = 99/200 (49%), Gaps = 21/200 (10%)

Query: 43   LQFSKNEYSVSALENLPVNYVLLTVTT-NKPRDLRVKYWLSNDYGERFSISRQGDISLMQ 101
            L F  + Y  S  E  P   V+ +V        ++V Y+L + + ++F+IS QGDI  + 
Sbjct: 1023 LAFESSSYEFSIPEEEPARTVVGSVKALTGSIAIQVAYFLRS-HTDKFTISDQGDIVTLA 1081

Query: 102  CLDYETEDSYRFTVYATDTLM---TTSATVNISVVNVNDWDPRF-RYPQYELFLPH--IP 155
             LD E +D Y   V A D+++   T  A V + V ++ND  P F +  Q +L LP    P
Sbjct: 1082 TLDREDDDLYSIVVEAVDSVVPPNTAIALVTVRVSDINDNPPVFSKSIQTKLSLPENAAP 1141

Query: 156  LADLTPGSVIGKVEAADGDKGDRVTLS--LRGPYEKMFSINDSGHISIVDLSALNTSTI- 212
            L        +G   A D D GD   +S  L+  +  MF IN S    ++  ++L+  T+ 
Sbjct: 1142 LD-------LGTFSATDLDIGDNAFISYYLQDDFAGMFHINTSTG-KLMTGTSLDRETME 1193

Query: 213  --QLVVVATDTGNPPRQASV 230
              +L ++ATD+G PP   S+
Sbjct: 1194 NYELKIIATDSGKPPLSTSL 1213



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 56/208 (26%), Positives = 95/208 (45%), Gaps = 19/208 (9%)

Query: 44   QFSKNEYSVSALEN------LPVNYVLLTVTTNKPRDLRVKYWLSNDYGER-FSISRQGD 96
            +F    YS + LE        PV   +     ++  + R+ Y LS++ G+  + I + G 
Sbjct: 811  EFQMQSYSFAVLEGDYRLGAPPVVGHVTATDLDEGDNARISYHLSSEDGDNPYVIQQDGT 870

Query: 97   ISLMQCLDYETEDSYRFTVYATDTLMTTSAT---VNISVVNVNDWDPRFRYPQYELFLPH 153
            I +   +D ET++ Y   + A+D  M        ++I V++VND  P F    Y   L  
Sbjct: 871  ILVNGYVDRETKEKYELLLVASDNGMPQRQNFTYISIQVLDVNDNVPLFTKMHY---LAS 927

Query: 154  IPLADLTPGSVIGKVEAADGDKGDR--VTLSLRGPYEKMFSI-NDSGHISIVDLSALNTS 210
            I +A    G+ +  V A D D G+   ++ SL   Y  +F I N +G I ++   A  T+
Sbjct: 928  IHVATAKEGAFVLSVSATDLDIGNNSVISYSLEN-YSDIFHISNHTGEIILISSLAHVTA 986

Query: 211  --TIQLVVVATDTGNPPRQASVPAIMHF 236
               + L V+A D G P   ++V   ++ 
Sbjct: 987  DTVVTLTVIAADHGVPQLASNVSVTVYL 1014



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 59/189 (31%), Positives = 86/189 (45%), Gaps = 18/189 (9%)

Query: 44  QFSKNEYSVSALENL--PVNYVLL---TVTTNKPRDLRVKYWLSNDYGERFSISRQGDIS 98
           QF +  Y+VS  E L  PV    +   ++T + P  LRV   L+      F +   G I 
Sbjct: 444 QFIQKTYNVSVKEELVSPVEVARVKYESLTPHIPVILRV---LTE--SATFDVDINGTIW 498

Query: 99  LMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLAD 158
               LDYE++++Y   +  +D + T  ATV I V +VND  P F      + +P     +
Sbjct: 499 TKIKLDYESQNNYILNISLSDGITTDYATVFIQVTDVNDNSPVFGVTNTTIKIPE----N 554

Query: 159 LTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDSGHISI-VDLSALNTSTIQLV 215
              G+ +  V A D D G    V  SL+G   KM  I+ SG I +  +L         L 
Sbjct: 555 TPAGTFVTSVPATDVDTGFNGLVVYSLKGAEGKM-DIDASGLILLKKELDREMQGIYDLE 613

Query: 216 VVATDTGNP 224
           V+A+D G P
Sbjct: 614 VIASDQGQP 622



 Score = 42.7 bits (99), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 51/168 (30%), Positives = 82/168 (48%), Gaps = 24/168 (14%)

Query: 52  VSALENLPVNYVLLTVTTNKPRDL-----RVKYWLSNDYGERFSISRQGDISLM--QCLD 104
           V ++E   +N +++ V   + +DL      + Y L     + F I R+GD ++M  + LD
Sbjct: 73  VDSIEVSAINSIVIKVEA-QDKDLSPLFSHISYSLWGPNSDYFYI-REGDGNIMVNKTLD 130

Query: 105 YETEDSYRFTVYATDTLMTTSATVNISVVNVNDWD---PRFRYPQYELFLPHIPLADLTP 161
           Y   + +  TV A +     S TV++ +++V D+D   P F  P Y      I    L P
Sbjct: 131 YNKINHFNLTVQAKERFGNNSNTVSL-IIDVQDYDTLNPYFSLPVYN---GTISENQLGP 186

Query: 162 GSVI-GKVEAADGDKG--DRVTLSLR----GPYEKMFSIN-DSGHISI 201
            S++  KV A DGD G  ++V  S++      Y   FSIN DSG + +
Sbjct: 187 LSILPEKVLAKDGDTGINEKVYYSIKLVSPPAYSNTFSINADSGILEV 234



 Score = 42.4 bits (98), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 43/152 (28%), Positives = 67/152 (44%), Gaps = 21/152 (13%)

Query: 56   ENLPVNYV--LLTVTTNKPRDLRVKYWLSNDYGERFSISRQ-GDISLMQCLDYETEDS-Y 111
            ENLP   +  L+    +  R+  + Y + +  G +F I    G +      DYE E + Y
Sbjct: 1428 ENLPATQIVHLVAQDNDTGRNGVLTYSILSGDGTKFRIDETTGILYSTVSFDYEEEPTEY 1487

Query: 112  RFTVYATDTLMTTS----ATVNISVVNVNDWDPRFRYPQYELFLPHIPLA---DLTPGSV 164
            +  +YA D  +        TV + + +VNDW P F         P  P +   ++    +
Sbjct: 1488 QVVIYAEDDGIPEKKRGYCTVVVKITDVNDWPPVFN--------PVTPFSVNENVDVEFI 1539

Query: 165  IGKVEAADGDKGDR--VTLSLRGPYEKMFSIN 194
            +GKV A D D GD   V  SL G   ++F I+
Sbjct: 1540 VGKVTATDRDTGDNAFVLYSLTGGGGEIFEID 1571



 Score = 41.2 bits (95), Expect = 0.91,   Method: Compositional matrix adjust.
 Identities = 38/132 (28%), Positives = 59/132 (44%), Gaps = 9/132 (6%)

Query: 102 CLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTP 161
           C    T+D   + V A    + +S   +I+V++VND +P F+   Y   +      D   
Sbjct: 772 CTFSVTDDDEVWAVDAEKDGLNSSCLFHITVLDVNDNNPEFQMQSYSFAVLE---GDYRL 828

Query: 162 GS--VIGKVEAADGDKGDRVTLSLRGPYEKM---FSINDSGHISIVDLSALNT-STIQLV 215
           G+  V+G V A D D+GD   +S     E     + I   G I +       T    +L+
Sbjct: 829 GAPPVVGHVTATDLDEGDNARISYHLSSEDGDNPYVIQQDGTILVNGYVDRETKEKYELL 888

Query: 216 VVATDTGNPPRQ 227
           +VA+D G P RQ
Sbjct: 889 LVASDNGMPQRQ 900



 Score = 40.0 bits (92), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 57/224 (25%), Positives = 87/224 (38%), Gaps = 48/224 (21%)

Query: 15  VRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRD 74
           + A Q DN  + A A ++V+    S     FS+  Y+VS LEN P    +L V      +
Sbjct: 250 IEAAQQDNILKTADAIVLVTIEDVSDNPPVFSQLSYNVSILENFPKGKEVLRVEAVDKDE 309

Query: 75  LRVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVN 134
           +  +  LS  Y E                                      + +NI +++
Sbjct: 310 VTARDHLS-PYDE------------------------------------AQSAINILLLD 332

Query: 135 VNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFS 192
            ND  P F   +YE     +   ++T G  I +V A D D G    ++  L G  E  + 
Sbjct: 333 ENDNSPTFTDTRYE----QVIFINMTAGMPILQVAADDPDDGINGAISFVLAGGNEDGYF 388

Query: 193 IND--SGHI---SIVDLSALNTSTIQLVVVATDTGNPPRQASVP 231
             D  +G I   +++ L    +    L V ATD G  PR +SVP
Sbjct: 389 EMDKATGQINLKAVIPLRINESKNFVLWVTATDGGTNPRSSSVP 432



 Score = 38.1 bits (87), Expect = 7.6,   Method: Compositional matrix adjust.
 Identities = 49/182 (26%), Positives = 77/182 (42%), Gaps = 17/182 (9%)

Query: 88  RFSISRQGDISLMQCLDYETEDSYRFTVYATDTLMTTSATV-NISVV--NVNDWDPRFRY 144
           +  I   G I L + LD E +  Y   V A+D      +TV N++VV  +VND  P F  
Sbjct: 587 KMDIDASGLILLKKELDREMQGIYDLEVIASDQGQPRLSTVLNLTVVIDDVNDNPPVFLS 646

Query: 145 PQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEK------MFSIN-DSG 197
            +YE+ +P     D   GS +  V A D D G    +  R   ++      +F +N  +G
Sbjct: 647 SRYEVTVPE----DKAHGSELLTVSATDLDAGTNALVKYRIISQQPLTSSPVFLVNLTTG 702

Query: 198 HISIV-DLSALNTSTIQLVVVATDTGNPPRQASVPAIMHFPEAIVQQASSKLNSGTSSTV 256
              +   L    T   ++ + A+D G P    S   ++H  +  V     K N  T   V
Sbjct: 703 QFFLSQQLDYETTKQFEVELEASDGGQPSLNTSTQVVIHVLD--VNDNPPKFNQATYDIV 760

Query: 257 LI 258
           ++
Sbjct: 761 VV 762



 Score = 38.1 bits (87), Expect = 7.6,   Method: Compositional matrix adjust.
 Identities = 37/133 (27%), Positives = 57/133 (42%), Gaps = 14/133 (10%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGERFSISR-QGDISLMQCL 103
             S+  YSV   EN P + +     T+K          +      F +    G IS +Q L
Sbjct: 1229 LSQELYSVIVKENDPPHVIXXXXXTDKDTGYNAIIHYTIIEETSFHVGEFSGAISTVQPL 1288

Query: 104  DYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGS 163
            DYE+   Y FT+ A + ++         V +VN+  P F  P Y   LP     + T G+
Sbjct: 1289 DYESCAHYTFTLKAFNPVI---------VEDVNEEGPMFDKPSYFQILPD----NSTAGT 1335

Query: 164  VIGKVEAADGDKG 176
            ++  ++A D  KG
Sbjct: 1336 LVVDIDARDESKG 1348



 Score = 38.1 bits (87), Expect = 7.9,   Method: Compositional matrix adjust.
 Identities = 55/208 (26%), Positives = 81/208 (38%), Gaps = 31/208 (14%)

Query: 56   ENLPVNYVLLTVTTNKPRDLR----VKYWLSNDYGERFSISR-QGDISLMQCLDYETEDS 110
            EN+ V +++  VT    RD      V Y L+   GE F I    G+I +    DYE  + 
Sbjct: 1532 ENVDVEFIVGKVTATD-RDTGDNAFVLYSLTGGGGEIFEIDAILGNIMIKNSPDYENVNK 1590

Query: 111  YRFTVYATDT----LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHI-PLADLTPGSVI 165
            Y  TV A +         +  V + V++VND  P F    Y   +  I P+     G+ +
Sbjct: 1591 YTLTVNAVNNKSAPFYQATTNVTVLVIDVNDNAPVFVQNSYSASINMINPV-----GAHV 1645

Query: 166  GKVEAADGDKGDRVTLSL----RGPYEKMFSINDSGHISIVDLSALNT-STIQLVVVATD 220
              V A D D+G    +         +   F I D     I+    L+    I L V+A D
Sbjct: 1646 ITVHATDKDQGQNGLIEYYIIPDLNFSVFFLIEDESEGKIITTGNLSRFEEIHLTVMAKD 1705

Query: 221  TGNPPRQASV----------PAIMHFPE 238
             G+P    +           P + HF E
Sbjct: 1706 KGSPSLNGTAVITLNVTDNRPFVPHFIE 1733


>gi|426344013|ref|XP_004038572.1| PREDICTED: protocadherin-7 isoform 4 [Gorilla gorilla gorilla]
          Length = 1072

 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 62/203 (30%), Positives = 92/203 (45%), Gaps = 21/203 (10%)

Query: 37  GTSLRELQFSKNEYSVSALENLPVNYV--LLTVTTNKPRDLRVKYWLSNDYGERFSIS-R 93
           G S+ E+ F +N        N+P   V  +L    +  ++  + Y L +     F+I   
Sbjct: 536 GQSVVEVYFPEN--------NIPGERVATVLATDADSGKNAEIAYSLDSSVMGIFAIDPD 587

Query: 94  QGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELF 150
            GDI +   LD E  D Y F V A D    ++  S TV + V + ND DP+F    +  +
Sbjct: 588 SGDILVNTVLDREQTDRYEFKVNAKDKGIPVLQGSTTVIVQVADKNDNDPKFMQDVFTFY 647

Query: 151 LPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSI-NDSGHI-SIVDLSAL 207
           +      +L P S +G V   D DKG    +SL       +FSI ND+G I S +     
Sbjct: 648 VKE----NLQPNSPVGMVTVMDADKGRNAEMSLYIEENNNIFSIENDTGTIYSTMSFDRE 703

Query: 208 NTSTIQLVVVATDTGNPPRQASV 230
           + +T    V A D G+PPR A+ 
Sbjct: 704 HQTTYTFRVKAVDGGDPPRSATA 726



 Score = 45.1 bits (105), Expect = 0.054,   Method: Compositional matrix adjust.
 Identities = 77/316 (24%), Positives = 136/316 (43%), Gaps = 46/316 (14%)

Query: 30  TLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVT---TNKPRDLRVKYWLSNDYG 86
           T+IV  A  +  + +F ++ ++    ENL  N  +  VT    +K R+  +  ++  +  
Sbjct: 624 TVIVQVADKNDNDPKFMQDVFTFYVKENLQPNSPVGMVTVMDADKGRNAEMSLYIEEN-N 682

Query: 87  ERFSISRQ-GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRF 142
             FSI    G I      D E + +Y F V A D      + +ATV++ V++ ND  P  
Sbjct: 683 NIFSIENDTGTIYSTMSFDREHQTTYTFRVKAVDGGDPPRSATATVSLFVMDENDNAPTV 742

Query: 143 RYPQ---YELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-D 195
             P+   Y L  P   +      +V+  V A D D G    L+   + G   K+F I+  
Sbjct: 743 TLPKNISYTLLPPSSNVR-----TVVATVLATDSDDGINADLNYSIVGGNPFKLFEIDPT 797

Query: 196 SGHISIV-DLSALNTSTIQLVVVATDTGNPPRQASVPAIMHFPEA------IVQQASSKL 248
           SG +S+V  L+  +    +LVV   D+G P +  +    +   E+      I  Q +  L
Sbjct: 798 SGVVSLVGKLTQKHYGLHRLVVQVNDSGQPSQSTTTLVHVFVNESVSNATVIDSQIARSL 857

Query: 249 NSGTSSTVL-------------IILGVVLIVLGFVIILLILYIHKNKHTKN-NGPPGSSH 294
           ++  +  +              I++GVV  ++  ++I+LI+ + +   +KN NG      
Sbjct: 858 HTPLTQDIAGDPSYEISKQRLSIVIGVVAGIMTVILIILIVVMARYCRSKNKNGYEAGKK 917

Query: 295 SKNDSFLSNVILPEKH 310
              D F      P++H
Sbjct: 918 DHEDFF-----TPQQH 928



 Score = 43.1 bits (100), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 41/160 (25%), Positives = 72/160 (45%), Gaps = 26/160 (16%)

Query: 93  RQGDISLMQCLDYETEDSYRFTVY---ATDTLMTTSATVNISVVNVNDWDPRFRYPQYEL 149
           +Q  + +   LD E  DSY  T+      D   ++ A + + + +VND  PRF    YE 
Sbjct: 256 KQPQLIVKGALDREQRDSYELTLRVRDGGDPPRSSQAILRVLITDVNDNSPRFEKSVYEA 315

Query: 150 FLPHIPLADLTPGSVIGKVEAADGDKG---------DRVTLSLRGPYEKMFSIND-SGHI 199
            L      +  PG+ I ++ AAD D G            T S+R    ++  +++ SG +
Sbjct: 316 DLAE----NSAPGTPILQLRAADLDVGVNGQIEYVFGAATESVR----RLLRLDETSGWL 367

Query: 200 SI---VDLSALNTSTIQLVVVATDTGNPPRQASVPAIMHF 236
           S+   +D   +N   ++  V+A D G PP+      +++ 
Sbjct: 368 SVLHRIDREEVN--QLRFTVMARDRGQPPKTDKATVVLNI 405


>gi|397513171|ref|XP_003826896.1| PREDICTED: protocadherin-7 isoform 3 [Pan paniscus]
          Length = 1208

 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 62/203 (30%), Positives = 92/203 (45%), Gaps = 21/203 (10%)

Query: 37  GTSLRELQFSKNEYSVSALENLPVNYV--LLTVTTNKPRDLRVKYWLSNDYGERFSIS-R 93
           G S+ E+ F +N        N+P   V  +L    +  ++  + Y L +     F+I   
Sbjct: 475 GQSVVEVYFPEN--------NIPGERVATVLATDADSGKNAEIAYSLDSSVMGIFAIDPD 526

Query: 94  QGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELF 150
            GDI +   LD E  D Y F V A D    ++  S TV + V + ND DP+F    +  +
Sbjct: 527 SGDILVNTVLDREQTDRYEFKVNAKDKGIPVLQGSTTVIVQVADKNDNDPKFMQDVFTFY 586

Query: 151 LPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSI-NDSGHI-SIVDLSAL 207
           +      +L P S +G V   D DKG    +SL       +FSI ND+G I S +     
Sbjct: 587 VKE----NLQPNSPVGMVTVMDADKGRNAEMSLYIEENNNIFSIENDTGTIYSTMSFDRE 642

Query: 208 NTSTIQLVVVATDTGNPPRQASV 230
           + +T    V A D G+PPR A+ 
Sbjct: 643 HQTTYTFRVKAVDGGDPPRSATA 665



 Score = 45.1 bits (105), Expect = 0.063,   Method: Compositional matrix adjust.
 Identities = 77/316 (24%), Positives = 136/316 (43%), Gaps = 46/316 (14%)

Query: 30  TLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVT---TNKPRDLRVKYWLSNDYG 86
           T+IV  A  +  + +F ++ ++    ENL  N  +  VT    +K R+  +  ++  +  
Sbjct: 563 TVIVQVADKNDNDPKFMQDVFTFYVKENLQPNSPVGMVTVMDADKGRNAEMSLYIEEN-N 621

Query: 87  ERFSISRQ-GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRF 142
             FSI    G I      D E + +Y F V A D      + +ATV++ V++ ND  P  
Sbjct: 622 NIFSIENDTGTIYSTMSFDREHQTTYTFRVKAVDGGDPPRSATATVSLFVMDENDNAPTV 681

Query: 143 RYPQ---YELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-D 195
             P+   Y L  P   +      +V+  V A D D G    L+   + G   K+F I+  
Sbjct: 682 TLPKNISYTLLPPSSNVR-----TVVATVLATDSDDGINADLNYSIVGGNPFKLFEIDPT 736

Query: 196 SGHISIV-DLSALNTSTIQLVVVATDTGNPPRQASVPAIMHFPEA------IVQQASSKL 248
           SG +S+V  L+  +    +LVV   D+G P +  +    +   E+      I  Q +  L
Sbjct: 737 SGVVSLVGKLTQKHYGLHRLVVQVNDSGQPSQSTTTLVHVFVNESVSNATVIDSQIARSL 796

Query: 249 NSGTSSTVL-------------IILGVVLIVLGFVIILLILYIHKNKHTKN-NGPPGSSH 294
           ++  +  +              I++GVV  ++  ++I+LI+ + +   +KN NG      
Sbjct: 797 HTPLTQDIAGDPSYEISKQRLSIVIGVVAGIMTVILIILIVVMARYCRSKNKNGYEAGKK 856

Query: 295 SKNDSFLSNVILPEKH 310
              D F      P++H
Sbjct: 857 DHEDFF-----TPQQH 867



 Score = 43.1 bits (100), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 41/160 (25%), Positives = 72/160 (45%), Gaps = 26/160 (16%)

Query: 93  RQGDISLMQCLDYETEDSYRFTVY---ATDTLMTTSATVNISVVNVNDWDPRFRYPQYEL 149
           +Q  + +   LD E  DSY  T+      D   ++ A + + + +VND  PRF    YE 
Sbjct: 195 KQPQLIVKGALDREQRDSYELTLRVRDGGDPPRSSQAILRVLITDVNDNSPRFEKSVYEA 254

Query: 150 FLPHIPLADLTPGSVIGKVEAADGDKG---------DRVTLSLRGPYEKMFSIND-SGHI 199
            L      +  PG+ I ++ AAD D G            T S+R    ++  +++ SG +
Sbjct: 255 DLAE----NSAPGTPILQLRAADLDVGVNGQIEYVFGAATESVR----RLLRLDETSGWL 306

Query: 200 SI---VDLSALNTSTIQLVVVATDTGNPPRQASVPAIMHF 236
           S+   +D   +N   ++  V+A D G PP+      +++ 
Sbjct: 307 SVLHRIDREEVN--QLRFTVMARDRGQPPKTDKATVVLNI 344


>gi|440901253|gb|ELR52230.1| Protocadherin-7, partial [Bos grunniens mutus]
          Length = 1010

 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 62/203 (30%), Positives = 92/203 (45%), Gaps = 21/203 (10%)

Query: 37  GTSLRELQFSKNEYSVSALENLPVNYV--LLTVTTNKPRDLRVKYWLSNDYGERFSIS-R 93
           G S+ E+ F +N        N+P   V  +L    +  ++  + Y L +     F+I   
Sbjct: 424 GQSVVEVYFPEN--------NIPGERVATVLATDADSGKNAEIAYSLDSSVMGIFAIDPD 475

Query: 94  QGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELF 150
            GDI +   LD E  D Y F V A D    ++  S TV + V + ND DP+F    +  +
Sbjct: 476 SGDILVNTMLDREQTDRYEFKVNARDKGVPVLQGSTTVIVQVADKNDNDPKFMQDVFTFY 535

Query: 151 LPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSI-NDSGHI-SIVDLSAL 207
           +      +L P S +G V   D DKG    +SL       +FSI ND+G I S +     
Sbjct: 536 VKE----NLQPNSPVGMVTVMDADKGRNAEMSLYIEENSNIFSIENDTGTIYSTMSFDRE 591

Query: 208 NTSTIQLVVVATDTGNPPRQASV 230
           + +T    V A D G+PPR A+ 
Sbjct: 592 HQTTYTFRVKAVDGGDPPRSATA 614



 Score = 45.4 bits (106), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 77/316 (24%), Positives = 136/316 (43%), Gaps = 46/316 (14%)

Query: 30  TLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVT---TNKPRDLRVKYWLSNDYG 86
           T+IV  A  +  + +F ++ ++    ENL  N  +  VT    +K R+  +  ++  +  
Sbjct: 512 TVIVQVADKNDNDPKFMQDVFTFYVKENLQPNSPVGMVTVMDADKGRNAEMSLYIEEN-S 570

Query: 87  ERFSISRQ-GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRF 142
             FSI    G I      D E + +Y F V A D      + +ATV++ V++ ND  P  
Sbjct: 571 NIFSIENDTGTIYSTMSFDREHQTTYTFRVKAVDGGDPPRSATATVSLFVMDENDNAPTV 630

Query: 143 RYPQ---YELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIND- 195
             P+   Y L  P   +      +V+  V A D D G    L+   + G   K+F I+  
Sbjct: 631 TLPRNISYTLLPPSSNVR-----TVVATVLATDSDDGINADLNYSIVGGNPFKLFEIDST 685

Query: 196 SGHISIV-DLSALNTSTIQLVVVATDTGNPPRQASVPAIMHFPEA------IVQQASSKL 248
           SG +S+V  L+  +    +LVV   D+G P +  +    +   E+      I  Q +  L
Sbjct: 686 SGVVSLVGKLTQKHYGLHRLVVQVNDSGQPSQSTTTLVHVFVNESVSNATVIDSQIARSL 745

Query: 249 NSGTSSTVL-------------IILGVVLIVLGFVIILLILYIHKNKHTKN-NGPPGSSH 294
           ++  +  +              I++GVV  ++  ++I+LI+ + +   +KN NG      
Sbjct: 746 HTPLTQDIAGDPSYEISKQRLSIVIGVVAGIMTVILIILIVVMARYCRSKNKNGYEAGKK 805

Query: 295 SKNDSFLSNVILPEKH 310
              D F      P++H
Sbjct: 806 DHEDFF-----TPQQH 816


>gi|355749205|gb|EHH53604.1| hypothetical protein EGM_14280 [Macaca fascicularis]
          Length = 1100

 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 62/203 (30%), Positives = 92/203 (45%), Gaps = 21/203 (10%)

Query: 37  GTSLRELQFSKNEYSVSALENLPVNYV--LLTVTTNKPRDLRVKYWLSNDYGERFSIS-R 93
           G S+ E+ F +N        N+P   V  +L    +  ++  + Y L +     F+I   
Sbjct: 390 GQSVVEVYFPEN--------NIPGERVATVLATDADSGKNAEIAYSLDSSVMGIFAIDPD 441

Query: 94  QGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELF 150
            GDI +   LD E  D Y F V A D    ++  S TV + V + ND DP+F    +  +
Sbjct: 442 SGDILVNTVLDREQTDRYEFKVNAKDKGIPVLQGSTTVIVQVADKNDNDPKFMQDVFTFY 501

Query: 151 LPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSI-NDSGHI-SIVDLSAL 207
           +      +L P S +G V   D DKG    +SL       +FSI ND+G I S +     
Sbjct: 502 VKE----NLQPNSPVGMVTVMDADKGRNAEMSLYIEENNNIFSIENDTGTIYSTMSFDRE 557

Query: 208 NTSTIQLVVVATDTGNPPRQASV 230
           + +T    V A D G+PPR A+ 
Sbjct: 558 HQTTYTFRVKAVDGGDPPRSATA 580


>gi|443706936|gb|ELU02770.1| hypothetical protein CAPTEDRAFT_228443 [Capitella teleta]
          Length = 2181

 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 63/197 (31%), Positives = 100/197 (50%), Gaps = 20/197 (10%)

Query: 56   ENLPVNYVLLTVTTNKPR-DLRVKYWL---SNDYGERFSIS-RQGDISLMQCLDYET--E 108
            E +P+   + T+  + P+ D  VK +      +  + FS+  R G++ + + L+YE    
Sbjct: 1336 EEIPIGSKITTLVASDPQSDELVKNFKIVEGTNPNQYFSVDPRTGEVFVSKRLNYEPLPS 1395

Query: 109  DSYRFTVYA---TDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVI 165
             +  F V A    +   +  AT+N+ V+++ND  PRF    Y   +P   LA+ T    I
Sbjct: 1396 KTLSFQVEAFTEGNNPKSAVATINVEVLDMNDHSPRFSQDGYTFSVPE-GLANPTQ---I 1451

Query: 166  GKVEAADGDKGD--RVTLSLRGPYEKMFSIN-DSGHISI---VDLSALNTSTIQLVVVAT 219
            G V A+D D GD   +T SL GP  + F I+  +G+I +   V L     S + L V AT
Sbjct: 1452 GVVIASDEDSGDLGDITYSLSGPQAQFFEIDPKNGYIIVAPDVTLDREQQSQLTLTVTAT 1511

Query: 220  DTGNPPRQASVPAIMHF 236
            D G+P R+ SVP I++ 
Sbjct: 1512 DGGDPTRETSVPVIVYL 1528



 Score = 55.1 bits (131), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 66/265 (24%), Positives = 114/265 (43%), Gaps = 35/265 (13%)

Query: 1    DINEDDFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPV 60
            D    D  Q I  +V   +   Q + + AT+ ++    +    +FS+  YS S  EN  V
Sbjct: 800  DYERPDNRQQILRIVAREEMSTQQQSSTATVTITLKDLNDNAPKFSQESYSTSVRENREV 859

Query: 61   NYVLLTVTTNKPRDL----RVKYWLSNDYGE------------------RFSISRQ-GDI 97
             +++ T+T   P       ++ Y L  +  +                  RF +  Q G I
Sbjct: 860  GFLIDTITATDPDTTNNFGKITYSLEGEDSDMLVQMKSAFLTIVCNSFIRFLVDAQTGQI 919

Query: 98   SLMQCLDYETEDSYRFTVYATDTL-MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
            +L + LD+ET+  Y  T  ATD   ++T     ++V++ ND  P F   QY+  +     
Sbjct: 920  TLAKALDFETQQEYGLTYMATDGGDLSTFVAFRVAVLDFNDQGPIFPIDQYDSIITE-SS 978

Query: 157  ADLTPGSVIGKVEAADGDKGDRVTLSLRGPY--EKMFSIND-SGHISI---VDLSALNT- 209
              L P      V A D +    VT ++ G    +  F I+  +G +S+   VD    +  
Sbjct: 979  TKLNPNIT---VSAFDLESDAEVTYAIVGGNTPDNAFRIDPLTGELSLTRTVDYEETDGL 1035

Query: 210  STIQLVVVATDTGNPPRQASVPAIM 234
               +L+V A+D G P + ++VP ++
Sbjct: 1036 GKFELIVEASDNGFPEQVSTVPVVI 1060



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 32/101 (31%), Positives = 54/101 (53%), Gaps = 7/101 (6%)

Query: 87  ERFSISRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFR 143
           E+     QG + L + LDYET  SYR  + A D     +  + +V+ISV+++ D  PRF 
Sbjct: 551 EKIGDVYQGSLKLKKMLDYETRTSYRMFLQAMDAGIPSLQDTISVDISVLDIQDGGPRFL 610

Query: 144 YPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR 184
                L +      ++  G+VIG+++A D D G+   +++R
Sbjct: 611 NAPLSLVV----YENVPQGNVIGQLQARDTDSGNPSVVAIR 647



 Score = 38.1 bits (87), Expect = 7.6,   Method: Compositional matrix adjust.
 Identities = 62/240 (25%), Positives = 100/240 (41%), Gaps = 21/240 (8%)

Query: 11   ITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENL--PVNYVLLTVT 68
            ++  V A    N  + A+AT+ V     +    +FS++ Y+ S  E L  P    ++  +
Sbjct: 1398 LSFQVEAFTEGNNPKSAVATINVEVLDMNDHSPRFSQDGYTFSVPEGLANPTQIGVVIAS 1457

Query: 69   TNKPRDL-RVKYWLSNDYGERFSISRQGDISLMQ---CLDYETEDSYRFTVYATDT---L 121
                 DL  + Y LS    + F I  +    ++     LD E +     TV ATD     
Sbjct: 1458 DEDSGDLGDITYSLSGPQAQFFEIDPKNGYIIVAPDVTLDREQQSQLTLTVTATDGGDPT 1517

Query: 122  MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDR--V 179
              TS  V + +++ ND  P F    Y     H  L +    + +G+V A+DGD G    V
Sbjct: 1518 RETSVPVIVYLLDENDNKPVFEQTSYT--FNH--LENTGAQTSLGRVAASDGDAGASGIV 1573

Query: 180  TLSLRGPYEK-MFSINDSGHISIVDLSALNTSTIQ----LVVVATDTGNPPRQASVPAIM 234
            T ++ G  E  +F +  S  + I +   L     +    L V A D GNP + ++    M
Sbjct: 1574 TYNIVGGDENGLFYVETSTGV-IRNRKPLEGKARELPYTLTVEAQDGGNPAQTSTTRVDM 1632


>gi|114593512|ref|XP_001134665.1| PREDICTED: protocadherin-7 isoform 1 [Pan troglodytes]
 gi|410223662|gb|JAA09050.1| protocadherin 7 [Pan troglodytes]
          Length = 1072

 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 62/203 (30%), Positives = 92/203 (45%), Gaps = 21/203 (10%)

Query: 37  GTSLRELQFSKNEYSVSALENLPVNYV--LLTVTTNKPRDLRVKYWLSNDYGERFSIS-R 93
           G S+ E+ F +N        N+P   V  +L    +  ++  + Y L +     F+I   
Sbjct: 536 GQSVVEVYFPEN--------NIPGERVATVLATDADSGKNAEIAYSLDSSVMGIFAIDPD 587

Query: 94  QGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELF 150
            GDI +   LD E  D Y F V A D    ++  S TV + V + ND DP+F    +  +
Sbjct: 588 SGDILVNTVLDREQTDRYEFKVNAKDKGIPVLQGSTTVIVQVADKNDNDPKFMQDVFTFY 647

Query: 151 LPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSI-NDSGHI-SIVDLSAL 207
           +      +L P S +G V   D DKG    +SL       +FSI ND+G I S +     
Sbjct: 648 VKE----NLQPNSPVGMVTVMDADKGRNAEMSLYIEENNNIFSIENDTGTIYSTMSFDRE 703

Query: 208 NTSTIQLVVVATDTGNPPRQASV 230
           + +T    V A D G+PPR A+ 
Sbjct: 704 HQTTYTFRVKAVDGGDPPRSATA 726



 Score = 45.1 bits (105), Expect = 0.057,   Method: Compositional matrix adjust.
 Identities = 77/316 (24%), Positives = 136/316 (43%), Gaps = 46/316 (14%)

Query: 30  TLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVT---TNKPRDLRVKYWLSNDYG 86
           T+IV  A  +  + +F ++ ++    ENL  N  +  VT    +K R+  +  ++  +  
Sbjct: 624 TVIVQVADKNDNDPKFMQDVFTFYVKENLQPNSPVGMVTVMDADKGRNAEMSLYIEEN-N 682

Query: 87  ERFSISRQ-GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRF 142
             FSI    G I      D E + +Y F V A D      + +ATV++ V++ ND  P  
Sbjct: 683 NIFSIENDTGTIYSTMSFDREHQTTYTFRVKAVDGGDPPRSATATVSLFVMDENDNAPTV 742

Query: 143 RYPQ---YELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-D 195
             P+   Y L  P   +      +V+  V A D D G    L+   + G   K+F I+  
Sbjct: 743 TLPKNISYTLLPPSSNVR-----TVVATVLATDSDDGINADLNYSIVGGNPFKLFEIDPT 797

Query: 196 SGHISIV-DLSALNTSTIQLVVVATDTGNPPRQASVPAIMHFPEA------IVQQASSKL 248
           SG +S+V  L+  +    +LVV   D+G P +  +    +   E+      I  Q +  L
Sbjct: 798 SGVVSLVGKLTQKHYGLHRLVVQVNDSGQPSQSTTTLVHVFVNESVSNATVIDSQIARSL 857

Query: 249 NSGTSSTVL-------------IILGVVLIVLGFVIILLILYIHKNKHTKN-NGPPGSSH 294
           ++  +  +              I++GVV  ++  ++I+LI+ + +   +KN NG      
Sbjct: 858 HTPLTQDIAGDPSYEISKQRLSIVIGVVAGIMTVILIILIVVMARYCRSKNKNGYEAGKK 917

Query: 295 SKNDSFLSNVILPEKH 310
              D F      P++H
Sbjct: 918 DHEDFF-----TPQQH 928



 Score = 43.1 bits (100), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 41/160 (25%), Positives = 72/160 (45%), Gaps = 26/160 (16%)

Query: 93  RQGDISLMQCLDYETEDSYRFTVY---ATDTLMTTSATVNISVVNVNDWDPRFRYPQYEL 149
           +Q  + +   LD E  DSY  T+      D   ++ A + + + +VND  PRF    YE 
Sbjct: 256 KQPQLIVKGALDREQRDSYELTLRVRDGGDPPRSSQAILRVLITDVNDNSPRFEKSVYEA 315

Query: 150 FLPHIPLADLTPGSVIGKVEAADGDKG---------DRVTLSLRGPYEKMFSIND-SGHI 199
            L      +  PG+ I ++ AAD D G            T S+R    ++  +++ SG +
Sbjct: 316 DLAE----NSAPGTPILQLRAADLDVGVNGQIEYVFGAATESVR----RLLRLDETSGWL 367

Query: 200 SI---VDLSALNTSTIQLVVVATDTGNPPRQASVPAIMHF 236
           S+   +D   +N   ++  V+A D G PP+      +++ 
Sbjct: 368 SVLHRIDREEVN--QLRFTVMARDRGQPPKTDKATVVLNI 405


>gi|402869111|ref|XP_003898613.1| PREDICTED: protocadherin-7 isoform 2 [Papio anubis]
          Length = 1072

 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 62/203 (30%), Positives = 92/203 (45%), Gaps = 21/203 (10%)

Query: 37  GTSLRELQFSKNEYSVSALENLPVNYV--LLTVTTNKPRDLRVKYWLSNDYGERFSIS-R 93
           G S+ E+ F +N        N+P   V  +L    +  ++  + Y L +     F+I   
Sbjct: 536 GQSVVEVYFPEN--------NIPGERVATVLATDADSGKNAEIAYSLDSSVMGIFAIDPD 587

Query: 94  QGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELF 150
            GDI +   LD E  D Y F V A D    ++  S TV + V + ND DP+F    +  +
Sbjct: 588 SGDILVNTVLDREQTDRYEFKVNAKDKGIPVLQGSTTVIVQVADKNDNDPKFMQDVFTFY 647

Query: 151 LPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSI-NDSGHI-SIVDLSAL 207
           +      +L P S +G V   D DKG    +SL       +FSI ND+G I S +     
Sbjct: 648 VKE----NLQPNSPVGMVTVMDADKGRNAEMSLYIEENNNIFSIENDTGTIYSTMSFDRE 703

Query: 208 NTSTIQLVVVATDTGNPPRQASV 230
           + +T    V A D G+PPR A+ 
Sbjct: 704 HQTTYTFRVKAVDGGDPPRSATA 726



 Score = 43.1 bits (100), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 41/160 (25%), Positives = 72/160 (45%), Gaps = 26/160 (16%)

Query: 93  RQGDISLMQCLDYETEDSYRFTVY---ATDTLMTTSATVNISVVNVNDWDPRFRYPQYEL 149
           +Q  + +   LD E  DSY  T+      D   ++ A + + + +VND  PRF    YE 
Sbjct: 256 KQPQLIVKGALDREQRDSYELTLRVRDGGDPPRSSQAILRVLITDVNDNSPRFEKSVYEA 315

Query: 150 FLPHIPLADLTPGSVIGKVEAADGDKG---------DRVTLSLRGPYEKMFSIND-SGHI 199
            L      +  PG+ I ++ AAD D G            T S+R    ++  +++ SG +
Sbjct: 316 DLAE----NSAPGTPILQLRAADLDVGVNGQIEYVFGAATESVR----RLLRLDETSGWL 367

Query: 200 SI---VDLSALNTSTIQLVVVATDTGNPPRQASVPAIMHF 236
           S+   +D   +N   ++  V+A D G PP+      +++ 
Sbjct: 368 SVLHRIDREEVN--QLRFTVMARDRGQPPKTDKATVVLNI 405


>gi|332218736|ref|XP_003258510.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin-7-like [Nomascus
           leucogenys]
          Length = 1162

 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 62/203 (30%), Positives = 92/203 (45%), Gaps = 21/203 (10%)

Query: 37  GTSLRELQFSKNEYSVSALENLPVNYV--LLTVTTNKPRDLRVKYWLSNDYGERFSIS-R 93
           G S+ E+ F +N        N+P   V  +L    +  ++  + Y L +     F+I   
Sbjct: 443 GQSVVEVYFPEN--------NIPGERVATVLATDADSGKNAEIAYSLESSVMGIFAIDPD 494

Query: 94  QGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELF 150
            GDI +   LD E  D Y F V A D    ++  S TV + V + ND DP+F    +  +
Sbjct: 495 SGDILVNTVLDREQTDRYEFKVNAKDKGIPVLQGSTTVIVQVADKNDNDPKFMQDVFTFY 554

Query: 151 LPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSI-NDSGHI-SIVDLSAL 207
           +      +L P S +G V   D DKG    +SL       +FSI ND+G I S +     
Sbjct: 555 VKE----NLQPNSPVGMVTVMDADKGRNAEMSLYIEENNNIFSIENDTGTIYSTMSFDRE 610

Query: 208 NTSTIQLVVVATDTGNPPRQASV 230
           + +T    V A D G+PPR A+ 
Sbjct: 611 HQTTYTFRVKAVDGGDPPRSATA 633



 Score = 44.7 bits (104), Expect = 0.070,   Method: Compositional matrix adjust.
 Identities = 77/316 (24%), Positives = 136/316 (43%), Gaps = 46/316 (14%)

Query: 30  TLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVT---TNKPRDLRVKYWLSNDYG 86
           T+IV  A  +  + +F ++ ++    ENL  N  +  VT    +K R+  +  ++  +  
Sbjct: 531 TVIVQVADKNDNDPKFMQDVFTFYVKENLQPNSPVGMVTVMDADKGRNAEMSLYIEEN-N 589

Query: 87  ERFSISRQ-GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRF 142
             FSI    G I      D E + +Y F V A D      + +ATV++ V++ ND  P  
Sbjct: 590 NIFSIENDTGTIYSTMSFDREHQTTYTFRVKAVDGGDPPRSATATVSLFVMDENDNAPTV 649

Query: 143 RYPQ---YELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-D 195
             P+   Y L  P   +      +V+  V A D D G    L+   + G   K+F I+  
Sbjct: 650 TLPKNISYTLLPPSSNVR-----TVVATVLATDSDDGINADLNYSIVGGNPFKLFEIDPT 704

Query: 196 SGHISIV-DLSALNTSTIQLVVVATDTGNPPRQASVPAIMHFPEA------IVQQASSKL 248
           SG +S+V  L+  +    +LVV   D+G P +  +    +   E+      I  Q +  L
Sbjct: 705 SGVVSLVGKLTQKHYGLHRLVVQVNDSGQPSQSTTTLVHVFVNESVSNATVIDSQIARSL 764

Query: 249 NSGTSSTVL-------------IILGVVLIVLGFVIILLILYIHKNKHTKN-NGPPGSSH 294
           ++  +  +              I++GVV  ++  ++I+LI+ + +   +KN NG      
Sbjct: 765 HTPLTQDIAGDPSYEISKQRLSIVIGVVAGIMTVILIILIVVMARYCRSKNKNGYEAGKK 824

Query: 295 SKNDSFLSNVILPEKH 310
              D F      P++H
Sbjct: 825 DHEDFF-----TPQQH 835


>gi|410957818|ref|XP_003985521.1| PREDICTED: protocadherin-7 isoform 1 [Felis catus]
          Length = 1048

 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 62/203 (30%), Positives = 92/203 (45%), Gaps = 21/203 (10%)

Query: 37  GTSLRELQFSKNEYSVSALENLPVNYV--LLTVTTNKPRDLRVKYWLSNDYGERFSIS-R 93
           G S+ E+ F +N        N+P   V  +L    +  ++  + Y L +     F+I   
Sbjct: 515 GQSVVEVYFPEN--------NIPGERVATVLATDADSGKNAEIAYSLDSSVMGIFAIDPD 566

Query: 94  QGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELF 150
            GDI +   LD E  D Y F V A D    ++  S TV + V + ND DP+F    +  +
Sbjct: 567 SGDILVNTVLDREQTDRYEFKVNAKDKGIPVLQGSTTVIVQVADKNDNDPKFMQDVFTFY 626

Query: 151 LPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSI-NDSGHI-SIVDLSAL 207
           +      +L P S +G V   D DKG    +SL       +FSI ND+G I S +     
Sbjct: 627 VKE----NLQPNSPVGMVTVMDADKGRNAEMSLYIEENSNIFSIENDTGTIYSTMSFDRE 682

Query: 208 NTSTIQLVVVATDTGNPPRQASV 230
           + +T    V A D G+PPR A+ 
Sbjct: 683 HQTTYTFRVKAVDGGDPPRSATA 705



 Score = 42.7 bits (99), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 41/160 (25%), Positives = 72/160 (45%), Gaps = 26/160 (16%)

Query: 93  RQGDISLMQCLDYETEDSYRFTVY---ATDTLMTTSATVNISVVNVNDWDPRFRYPQYEL 149
           +Q  + +   LD E  DSY  T+      D   ++ A + + + +VND  PRF    YE 
Sbjct: 235 KQPQLIVKGALDREQRDSYELTLRVRDGGDPPRSSQAILRVLITDVNDNSPRFEKSVYEA 294

Query: 150 FLPHIPLADLTPGSVIGKVEAADGDKG---------DRVTLSLRGPYEKMFSIND-SGHI 199
            L      +  PG+ I ++ AAD D G            T S+R    ++  +++ SG +
Sbjct: 295 DLAE----NSAPGTPILQLRAADLDVGVNGQIEYVFGAATESVR----RLLRLDETSGWL 346

Query: 200 SI---VDLSALNTSTIQLVVVATDTGNPPRQASVPAIMHF 236
           S+   +D   +N   ++  V+A D G PP+      +++ 
Sbjct: 347 SVLHRIDREEVN--QLRFTVMARDRGQPPKTDKATVVLNI 384


>gi|432108754|gb|ELK33382.1| Protocadherin-7 [Myotis davidii]
          Length = 684

 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 55/173 (31%), Positives = 80/173 (46%), Gaps = 11/173 (6%)

Query: 64  LLTVTTNKPRDLRVKYWLSNDYGERFSIS-RQGDISLMQCLDYETEDSYRFTVYATDT-- 120
           +L    +  ++  + Y L +     F+I    GDI +   LD E  D Y F V A D   
Sbjct: 172 VLATDADSGKNAEIAYSLDSSVMGVFAIDPDSGDILVNTVLDREQTDRYEFKVNARDKGV 231

Query: 121 -LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRV 179
            ++  S TV + V + ND DP+F    +  ++      +L P S +G V   D DKG   
Sbjct: 232 PVLQGSTTVIVQVADKNDNDPKFMQDVFTFYVKE----NLQPNSPVGMVTVMDADKGRNA 287

Query: 180 TLSLR-GPYEKMFSI-NDSGHI-SIVDLSALNTSTIQLVVVATDTGNPPRQAS 229
            +SL       +FSI ND+G I S V     + +T    V A D G+PPR A+
Sbjct: 288 EMSLYIEENSNIFSIENDTGTIYSTVSFDREHQTTYTFRVKAVDGGDPPRSAT 340



 Score = 46.6 bits (109), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 79/318 (24%), Positives = 137/318 (43%), Gaps = 50/318 (15%)

Query: 30  TLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVT---TNKPRDLRVKYWLSNDYG 86
           T+IV  A  +  + +F ++ ++    ENL  N  +  VT    +K R+  +  ++  +  
Sbjct: 239 TVIVQVADKNDNDPKFMQDVFTFYVKENLQPNSPVGMVTVMDADKGRNAEMSLYIEEN-S 297

Query: 87  ERFSISRQ-GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRF 142
             FSI    G I      D E + +Y F V A D      + +ATV++ V++ ND  P  
Sbjct: 298 NIFSIENDTGTIYSTVSFDREHQTTYTFRVKAVDGGDPPRSATATVSLFVMDENDNAPTV 357

Query: 143 RYPQ---YELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIND- 195
             P+   Y L  P   +      +V+  V A D D G    L+   + G   K+F I+  
Sbjct: 358 TLPRNLSYTLLPPSSNVR-----TVVATVLATDSDDGINADLNYSIVGGNPFKLFEIDST 412

Query: 196 SGHISIV-DLSALNTSTIQLVVVATDTGNPPRQASVPAIMHF--------PEAIVQQASS 246
           SG +S+V  L+  +    +LVV   D+G P +  S  A++H            I  Q + 
Sbjct: 413 SGVVSLVGKLTQKHYGLHRLVVQVNDSGQPSQ--STTALVHVFVNESVSNATVIDSQIAR 470

Query: 247 KLNSGTSSTVL-------------IILGVVLIVLGFVIILLILYIHKNKHTKN-NGPPGS 292
            L++  +  +              I++GVV  ++  ++I+LI+ + +   +KN NG    
Sbjct: 471 SLHTPLTQDIAGDPSYEISKQRLSIVIGVVAGIMTVILIILIVVMARYCRSKNKNGYEAG 530

Query: 293 SHSKNDSFLSNVILPEKH 310
                D F      P++H
Sbjct: 531 KKDHEDFF-----TPQQH 543


>gi|195350165|ref|XP_002041612.1| GM16650 [Drosophila sechellia]
 gi|194123385|gb|EDW45428.1| GM16650 [Drosophila sechellia]
          Length = 2943

 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 64/214 (29%), Positives = 93/214 (43%), Gaps = 27/214 (12%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWL-------------SNDYGER 88
           F K EYSV+  E+  +N  ++ V     +   + R+ Y +             S+D    
Sbjct: 452 FEKEEYSVNVSESRSINAQIIQVNASDLDTGNNARITYRIVDAGVDNVTNSISSSDVSHH 511

Query: 89  FSI-SRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRY 144
           F I    G I L   LD E  D Y+ T+ ATD           V + V++ ND DP+F+ 
Sbjct: 512 FGIFPNSGWIYLRAPLDREARDRYQLTILATDNGTPAAHAKTRVIVRVLDANDNDPKFQK 571

Query: 145 PQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRG-PYEKMFSIND-SGHISIV 202
            +YE  +      +L  GSV+G V A+D D G+   +     P    F ++  +G IS  
Sbjct: 572 SKYEFRIEE----NLRRGSVVGVVTASDLDLGENAAIRYSLLPINSSFQVHPVTGEISTR 627

Query: 203 D-LSALNTSTIQLVVVATDTGNPPRQASVPAIMH 235
           + L         LVV A D G P R A VP  +H
Sbjct: 628 EPLDRELRELYDLVVEARDQGTPVRSARVPVRIH 661



 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 61/201 (30%), Positives = 105/201 (52%), Gaps = 21/201 (10%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGERFSI-SRQGDISL 99
            +F  ++Y+ S  E+ P++  ++ ++    +   + R+ Y L+N+   +F+I S+ G I+ 
Sbjct: 1350 RFKLSKYTGSVQEDAPLSTSVVQISAVDADLGVNARLVYSLANETQWQFAIDSQSGLITT 1409

Query: 100  MQCLDYETEDSYRFTVYATD----TLMTTSATVNISVVNVNDWDPRF-RYPQYELFLPHI 154
            +  LD E + SY F V ATD     + + +  V I+V+++ND  P F RYP    ++  +
Sbjct: 1410 VGKLDRELQASYNFMVLATDGGRYEVRSATVPVQINVLDINDNRPVFERYP----YIGQV 1465

Query: 155  PLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKM---FSINDS-GHISIVD-LSAL 207
            P A + PG  + KV+A D D G    +  SL      +   F IN S G +S    L++ 
Sbjct: 1466 P-ALIQPGQTLLKVQALDADLGANAEIVYSLNAENSAVSAKFRINPSTGALSASQSLASE 1524

Query: 208  NTSTIQLVVVATDTGNPPRQA 228
            +   + L VVA D G PP+ +
Sbjct: 1525 SGKLLHLEVVARDKGTPPQSS 1545



 Score = 51.2 bits (121), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 47/141 (33%), Positives = 72/141 (51%), Gaps = 9/141 (6%)

Query: 92  SRQGDISLMQCLDYETEDSYRFTVYATDT-LMTTSATVNISVVNVNDWDPRFRYPQYELF 150
           S  G+I +   LD+E   SY F V ATD   ++T+A + + + +VND  P F   +Y++ 
Sbjct: 80  SASGEICIAGELDFERRSSYEFPVLATDRGGLSTTAMIKMQLTDVNDNRPVFYPREYKVS 139

Query: 151 LPHIPLADLTPGSV-IGKVEAADGDKGDRVTLSLR---GPYEKMFSINDS-GHISIV--D 203
           L   P A     S  I  V A D D G+   +S R   G    +F I+ S G I +V  D
Sbjct: 140 LRESPKAPSQASSTPIVAVVATDPDYGNFGQVSYRIVAGNEAGIFRIDRSTGEIFVVRPD 199

Query: 204 LSALNTSTIQLV-VVATDTGN 223
           + ++ T  + ++ + ATD GN
Sbjct: 200 MLSVRTQPMHMLNISATDGGN 220



 Score = 43.9 bits (102), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 49/160 (30%), Positives = 72/160 (45%), Gaps = 29/160 (18%)

Query: 95   GDISLMQCLDYETEDSYRFTVYATDT------LMTTSATVNISVVNVNDWDPRFRYPQ-- 146
            G +SL   LD+E    Y   V A D        + TS TV + V++ ND  P+F  P   
Sbjct: 948  GALSLQAPLDFEAVQEYLLIVQALDQSSNVTERLQTSVTVRLQVLDANDNAPQFVSPNAN 1007

Query: 147  ----YELFLPHIPLADLTP-GSVIGKVEAADGDKGD--RVTLSLRGPY-EKMFSIN-DSG 197
                  LF     ++D T  G V+  + A D D GD  R+T  + G   E  F IN  +G
Sbjct: 1008 GGKTASLF-----ISDATRIGEVVAHIVAVDEDSGDNGRLTYEITGGNGEGRFRINSQTG 1062

Query: 198  HISIVDLSALNTSTIQ------LVVVATDTGNP-PRQASV 230
             I +V      T  ++      L++ A D G P P+++S+
Sbjct: 1063 VIELVKSLPPATEDVEKGGRFNLIITAKDHGQPEPKKSSL 1102



 Score = 43.5 bits (101), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 41/122 (33%), Positives = 59/122 (48%), Gaps = 16/122 (13%)

Query: 74  DLRVKYWL---SNDYGER-FSISRQ-GDISLMQCLDYETEDSYRFTVYATDTLMT----- 123
           DLRV Y L   + D  E  F I R  G++ + + LD E +  +R  + A DT  T     
Sbjct: 808 DLRVTYTLNPLTKDLIEAAFDIDRHSGNLVVARLLDREVQSEFRLEIRALDTTATNNPQS 867

Query: 124 TSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTP-GSVIGKVEAADGDKGDRVTLS 182
           ++ TV I V +VND  P   +PQ  + L    +++ TP G++I    A D D G    L 
Sbjct: 868 SAITVKIEVADVNDNAP--EWPQDPIDL---QVSEATPVGTIIHNFTATDADTGTNGDLQ 922

Query: 183 LR 184
            R
Sbjct: 923 YR 924



 Score = 42.0 bits (97), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 63/229 (27%), Positives = 104/229 (45%), Gaps = 17/229 (7%)

Query: 9   QPITLV-VRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTV 67
           QP+ ++ + A    N    A A + +S      R   F K  Y+    E++P   V+ +V
Sbjct: 206 QPMHMLNISATDGGNLRSNADAVVFLSIIDAMQRPPIFEKARYNYYVKEDIPRGTVVGSV 265

Query: 68  ---TTNKPRDLRVKYWL-SNDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYAT--DT 120
              + +      V+Y + S D    FSI +  G+I + + LD+E +      + AT  + 
Sbjct: 266 IAASGDAAHRSPVRYSIYSGDPDGYFSIETNSGNIRIAKPLDHEAKSQVLLNIQATLGEP 325

Query: 121 LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGD--R 178
            +     VNI V +VND  P F      + +P    A+L  G+ +    A D D G   +
Sbjct: 326 PVYGHTQVNIEVEDVNDNAPEFEASMVRISVPE--SAEL--GAPLYAAHAHDKDSGSSGQ 381

Query: 179 VTLSL-RGPYEKMFSIN-DSGHISIVD-LSALNTSTIQLVVVATDTGNP 224
           VT SL +   + +F+I+  SGH+ +   L   ++    L+V ATD G P
Sbjct: 382 VTYSLVKDSGKGLFAIDARSGHLILSQHLDYESSQRHTLIVTATDGGVP 430



 Score = 41.2 bits (95), Expect = 0.76,   Method: Compositional matrix adjust.
 Identities = 50/186 (26%), Positives = 79/186 (42%), Gaps = 26/186 (13%)

Query: 76  RVKYWLSNDYGER-FSI-SRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNI 130
           +V Y L  D G+  F+I +R G + L Q LDYE+   +   V ATD     ++T+ T+ +
Sbjct: 381 QVTYSLVKDSGKGLFAIDARSGHLILSQHLDYESSQRHTLIVTATDGGVPSLSTNLTILV 440

Query: 131 SVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR------ 184
            V +VND  P F   +Y + +        +  + I +V A+D D G+   ++ R      
Sbjct: 441 DVQDVNDNPPVFEKEEYSVNVSE----SRSINAQIIQVNASDLDTGNNARITYRIVDAGV 496

Query: 185 -GPYEKMFSINDSGHISI----------VDLSALNTSTIQLVVVATDTGNPPRQASVPAI 233
                 + S + S H  I            L        QL ++ATD G P   A    I
Sbjct: 497 DNVTNSISSSDVSHHFGIFPNSGWIYLRAPLDREARDRYQLTILATDNGTPAAHAKTRVI 556

Query: 234 MHFPEA 239
           +   +A
Sbjct: 557 VRVLDA 562



 Score = 40.0 bits (92), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 31/108 (28%), Positives = 46/108 (42%), Gaps = 6/108 (5%)

Query: 92   SRQGDISLMQCLDYETEDSYRFTVYATDTL-MTTSATVNISVVNVNDWDPRFRYPQYELF 150
            S  G ++     DYE    Y   + A+D      S  V + + + +++ P+F    Y   
Sbjct: 2305 SESGLVTSAFVFDYEQRQRYDMELLASDMGGKKASVAVRVEIESRDEFTPQFTERTYRFV 2364

Query: 151  LPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDS 196
            LP      L  G V+G+V A D D G   RV   L  P+   F +N S
Sbjct: 2365 LP--AAVALPQGYVVGQVTATDSDSGPDGRVVYQLSAPHSH-FKVNRS 2409



 Score = 40.0 bits (92), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 62/220 (28%), Positives = 88/220 (40%), Gaps = 47/220 (21%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTT-------NKPRDLRVKYWLSNDYGERFSISRQ-G 95
            +F +  Y  + LEN+P    +L VT        N      +   ++ND    F +  Q G
Sbjct: 1117 RFLQAVYRATILENVPSGSFVLQVTAKSLHGAENANLSYEIPAGVANDL---FHVDWQRG 1173

Query: 96   DISLMQCLDYETEDSYRFTVYATD----TLMTTSA----------------------TVN 129
             I+     D E++ SY   VY  D    + M++SA                      T+ 
Sbjct: 1174 IITTRGQFDRESQASYVLPVYVRDANRLSTMSSSAVRKQRSSDSIGDTSNGQHFDVATIY 1233

Query: 130  ISVVNVNDWDPRFRYPQ-YELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR---G 185
            I+V +VND  P FR    Y L +P     +  PG VI  V A+D D+G    L      G
Sbjct: 1234 ITVGDVNDNSPEFRPGSCYGLSVPE----NSEPG-VIHTVVASDLDEGPNADLIYSITGG 1288

Query: 186  PYEKMFSIN-DSGHISIVDLSALNTSTIQLVVVATDTGNP 224
                 FSI+  SG +S   L     S   L + A+D G P
Sbjct: 1289 NLGNKFSIDSSSGDLSARPLDREQNSRYTLQIQASDRGQP 1328


>gi|397513167|ref|XP_003826894.1| PREDICTED: protocadherin-7 isoform 1 [Pan paniscus]
          Length = 1186

 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 62/203 (30%), Positives = 92/203 (45%), Gaps = 21/203 (10%)

Query: 37  GTSLRELQFSKNEYSVSALENLPVNYV--LLTVTTNKPRDLRVKYWLSNDYGERFSIS-R 93
           G S+ E+ F +N        N+P   V  +L    +  ++  + Y L +     F+I   
Sbjct: 475 GQSVVEVYFPEN--------NIPGERVATVLATDADSGKNAEIAYSLDSSVMGIFAIDPD 526

Query: 94  QGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELF 150
            GDI +   LD E  D Y F V A D    ++  S TV + V + ND DP+F    +  +
Sbjct: 527 SGDILVNTVLDREQTDRYEFKVNAKDKGIPVLQGSTTVIVQVADKNDNDPKFMQDVFTFY 586

Query: 151 LPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSI-NDSGHI-SIVDLSAL 207
           +      +L P S +G V   D DKG    +SL       +FSI ND+G I S +     
Sbjct: 587 VKE----NLQPNSPVGMVTVMDADKGRNAEMSLYIEENNNIFSIENDTGTIYSTMSFDRE 642

Query: 208 NTSTIQLVVVATDTGNPPRQASV 230
           + +T    V A D G+PPR A+ 
Sbjct: 643 HQTTYTFRVKAVDGGDPPRSATA 665



 Score = 45.1 bits (105), Expect = 0.065,   Method: Compositional matrix adjust.
 Identities = 77/316 (24%), Positives = 136/316 (43%), Gaps = 46/316 (14%)

Query: 30  TLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVT---TNKPRDLRVKYWLSNDYG 86
           T+IV  A  +  + +F ++ ++    ENL  N  +  VT    +K R+  +  ++  +  
Sbjct: 563 TVIVQVADKNDNDPKFMQDVFTFYVKENLQPNSPVGMVTVMDADKGRNAEMSLYIEEN-N 621

Query: 87  ERFSISRQ-GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRF 142
             FSI    G I      D E + +Y F V A D      + +ATV++ V++ ND  P  
Sbjct: 622 NIFSIENDTGTIYSTMSFDREHQTTYTFRVKAVDGGDPPRSATATVSLFVMDENDNAPTV 681

Query: 143 RYPQ---YELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-D 195
             P+   Y L  P   +      +V+  V A D D G    L+   + G   K+F I+  
Sbjct: 682 TLPKNISYTLLPPSSNVR-----TVVATVLATDSDDGINADLNYSIVGGNPFKLFEIDPT 736

Query: 196 SGHISIV-DLSALNTSTIQLVVVATDTGNPPRQASVPAIMHFPEA------IVQQASSKL 248
           SG +S+V  L+  +    +LVV   D+G P +  +    +   E+      I  Q +  L
Sbjct: 737 SGVVSLVGKLTQKHYGLHRLVVQVNDSGQPSQSTTTLVHVFVNESVSNATVIDSQIARSL 796

Query: 249 NSGTSSTVL-------------IILGVVLIVLGFVIILLILYIHKNKHTKN-NGPPGSSH 294
           ++  +  +              I++GVV  ++  ++I+LI+ + +   +KN NG      
Sbjct: 797 HTPLTQDIAGDPSYEISKQRLSIVIGVVAGIMTVILIILIVVMARYCRSKNKNGYEAGKK 856

Query: 295 SKNDSFLSNVILPEKH 310
              D F      P++H
Sbjct: 857 DHEDFF-----TPQQH 867



 Score = 43.1 bits (100), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 41/160 (25%), Positives = 72/160 (45%), Gaps = 26/160 (16%)

Query: 93  RQGDISLMQCLDYETEDSYRFTVY---ATDTLMTTSATVNISVVNVNDWDPRFRYPQYEL 149
           +Q  + +   LD E  DSY  T+      D   ++ A + + + +VND  PRF    YE 
Sbjct: 195 KQPQLIVKGALDREQRDSYELTLRVRDGGDPPRSSQAILRVLITDVNDNSPRFEKSVYEA 254

Query: 150 FLPHIPLADLTPGSVIGKVEAADGDKG---------DRVTLSLRGPYEKMFSIND-SGHI 199
            L      +  PG+ I ++ AAD D G            T S+R    ++  +++ SG +
Sbjct: 255 DLAE----NSAPGTPILQLRAADLDVGVNGQIEYVFGAATESVR----RLLRLDETSGWL 306

Query: 200 SI---VDLSALNTSTIQLVVVATDTGNPPRQASVPAIMHF 236
           S+   +D   +N   ++  V+A D G PP+      +++ 
Sbjct: 307 SVLHRIDREEVN--QLRFTVMARDRGQPPKTDKATVVLNI 344


>gi|348576082|ref|XP_003473816.1| PREDICTED: cadherin-23-like [Cavia porcellus]
          Length = 3354

 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 58/194 (29%), Positives = 89/194 (45%), Gaps = 18/194 (9%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWLSNDYGERFSISR-QGDISLM 100
            F +  Y V+ LE++PV  V+LTVT           ++Y L +  G +F+I+   GDI ++
Sbjct: 2402 FDQPFYQVAILEDVPVGTVILTVTATDADSGNFALIEYSLGDGEG-KFAINPITGDIYVL 2460

Query: 101  QCLDYETEDSYRFTVYATDT-------LMTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
              LD E +D Y  T  A D            S  V I V++VND  P+F  PQ+   +  
Sbjct: 2461 SSLDREKKDHYILTALAKDNPGDVASNRRENSVQVVIQVLDVNDCRPQFSKPQFSTSV-- 2518

Query: 154  IPLADLTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSINDSGHISIVDLSALNTST 211
                +   G+ +  + A D D+G    ++ SL GP  + F ++    +        +   
Sbjct: 2519 --YENEPAGTSVITMLATDQDEGSNGELSYSLEGPGMEAFHVDTDSGLVTTQRPLQSYER 2576

Query: 212  IQLVVVATDTGNPP 225
              L VVATD G PP
Sbjct: 2577 FNLTVVATDGGEPP 2590



 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 64/210 (30%), Positives = 98/210 (46%), Gaps = 28/210 (13%)

Query: 45  FSKNEYSVSALENLPVNYVLLTV--TTNKPRDL-RVKYWLSNDYGERFSISRQ-GDISLM 100
           FS+  Y+VS  EN+ V   +LTV  T N       V Y+ S+D  +RFS+ +  G I L+
Sbjct: 460 FSQPLYNVSLYENVTVGTSVLTVLATDNDVGTFGEVNYFFSDD-PDRFSLDKDTGLILLI 518

Query: 101 QCLDYETEDSYRFTVYATDTL-MTTSATVNISVVNVNDWDPRFRYPQYELFL----PHIP 155
             LD+E    +  TV A D     T+  V I+V++VND  P F+   Y   L    P + 
Sbjct: 519 AKLDFELIQRFTLTVIARDGGGEETTGRVRINVLDVNDNVPTFQKDAYVGALRENEPSV- 577

Query: 156 LADLTPGSVIGKVEAADGDK--GDRVTLSL-----RGPYEKMFSINDSGHISI---VDLS 205
                  + + ++ A D D    +++T S+      G Y  +      G IS+   +D  
Sbjct: 578 -------TQLVRLRATDEDSPPNNQITYSIVNASAFGTYFDVSVYEGYGVISVSRPLDYE 630

Query: 206 ALNTSTIQLVVVATDTGNPPRQASVPAIMH 235
            +    I L V+A D GNPP  ++VP  + 
Sbjct: 631 QIPNGLIYLTVMAKDAGNPPLHSTVPVTIE 660



 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 66/218 (30%), Positives = 100/218 (45%), Gaps = 44/218 (20%)

Query: 45  FSKNEYSVSALENLPVNY-VLLTVTTNKPRDLRVKYWLSNDYGE-----------RFSI- 91
           FSK  Y VS +EN+     VL    T+  R        S +YG+           +F I 
Sbjct: 671 FSKPAYFVSVVENIMAGATVLFLNATDLDR--------SREYGQESIIYSLEGSVQFRIN 722

Query: 92  SRQGDISLMQCLDYETEDSYRFTVYATD-----TLMTTSATVNISVVNVNDWDPRFRYPQ 146
           +R G+I+    LD E +  Y   V A D        T  ATVN++++++ND  P ++   
Sbjct: 723 ARSGEITTTSLLDRELKSEYILIVRAVDGGVGHNQKTGIATVNVTLLDINDNHPTWKDAP 782

Query: 147 YELFLPHIPLADLT-PGSVIGKVEAADGDKGDRVTL--SLRGPYEKMFSIND-SGHISI- 201
           Y     +I L ++T P S +  V A D D G+  TL  S++ P  K +S+N  +G I   
Sbjct: 783 Y-----YINLVEMTPPDSDVTTVVAVDPDLGENGTLVYSIQPP-NKFYSLNSTTGKIRTT 836

Query: 202 -VDLSALNTSTIQ------LVVVATDTGNPPRQASVPA 232
            V L   N   ++      ++V  TD G PP +A+  A
Sbjct: 837 HVMLDRENPDPVEAELMRKIIVSVTDCGRPPLKATSSA 874



 Score = 46.2 bits (108), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 63/235 (26%), Positives = 105/235 (44%), Gaps = 45/235 (19%)

Query: 65   LTVTTNKPRDLRVKYWLS---NDYG---------------ERFSIS-RQGDISLMQCLDY 105
            ++V+ + PR+ RV  WL+   ND G                +FS+  R   +  +  LD 
Sbjct: 1002 VSVSEDVPREFRV-VWLNCTDNDVGLNAELSYFITEGNVDGKFSVGYRDAVVRTVVGLDR 1060

Query: 106  ETEDSYRFTVYATDT-----LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLT 160
            ET  +Y   + A D        T +ATV ++V++VND  P F    YE  +P     D+ 
Sbjct: 1061 ETTAAYTLVLEAIDNGPVGKRRTGTATVFVTVLDVNDNRPIFLQSSYEASVPE----DIP 1116

Query: 161  PGSVIGKVEAADGDKGD--RVTLS-LRGPYEKMFSINDSGHISIVDLSALN---TSTIQL 214
             G  I +++A D D+G+  RV    L G +   F I+ S  + +     L+    S+  L
Sbjct: 1117 EGHSIVQLKATDADEGEFGRVWYRILHGNHGNHFRIHVSSGLLMRGPRPLDRERNSSHVL 1176

Query: 215  VVVATDTGNPPRQASVPAIMHF------PEAIVQQASSKLN----SGTSSTVLII 259
             V A +    P ++SV  I++       P    QQ  S+L     +G  ++V+++
Sbjct: 1177 TVEAYNHDLGPMRSSVRVIVYVEDVNDEPPVFAQQQYSRLGLRETAGIGTSVIVV 1231



 Score = 45.1 bits (105), Expect = 0.066,   Method: Compositional matrix adjust.
 Identities = 59/204 (28%), Positives = 91/204 (44%), Gaps = 25/204 (12%)

Query: 43   LQFSKNEYSVSALENLPVNYVLLTVTTNKPRDL-----RVKYWLSNDYGERFSI-SRQGD 96
            +QFS   Y+ + +ENL +   ++ V      +L     R     S      F I +  G 
Sbjct: 1311 VQFSNASYAAAIMENLALGTEIVRVQAYSIDNLNQITYRFDAHTSTQAKALFKIDAYTGV 1370

Query: 97   ISLMQCLDYETEDSYRFTVYATDTLMTTSATVN--ISVVNVNDWDPRFRYPQYELFLPHI 154
            I++   +D E  D Y  TV A D      +TV   I+V++ ND  PRF +         +
Sbjct: 1371 ITVKGPVDREKGDFYTLTVVADDGGPKVDSTVKVYITVLDENDNSPRFDFTSDSAV--SV 1428

Query: 155  PLADLTPGSVIGKVEAADGDKGD--RVTLSLR-----GPYEKMFSINDS-GHISI---VD 203
            P  D   G  +  V+A D D G   +V  SL      G +E + + NDS G + +   +D
Sbjct: 1429 P-EDCPVGQKVATVKARDPDAGSNGQVVFSLASGNIAGAFE-IVTTNDSIGEVFVARPLD 1486

Query: 204  LSALNTSTIQLVVVATDTGNPPRQ 227
               L+   ++  VVA+D G PPR+
Sbjct: 1487 REELDHYILK--VVASDRGRPPRK 1508



 Score = 44.7 bits (104), Expect = 0.077,   Method: Compositional matrix adjust.
 Identities = 69/287 (24%), Positives = 119/287 (41%), Gaps = 63/287 (21%)

Query: 4    EDDFL-QPITLVVRA----IQYDNQDRYALATLIVSKA-----GTSL-----RELQFSKN 48
            +D FL  P+T V+R     I  + QD Y L  +   +A     GT++      ++  S+ 
Sbjct: 2113 QDRFLIHPVTGVIRVGNATIDREEQDSYRLTVVATDRATVPLSGTAIVTILIDDINDSRP 2172

Query: 49   EY-----SVSALENLPVNYVLLTVTT-----NKPRDLRVKYWLSNDYGERFSISRQ---- 94
            E+     +VS LE+     V+  VT      N   +  +   ++ D  +R    ++    
Sbjct: 2173 EFLNPIQTVSVLESAEPGTVIANVTAIDLDLNPKLEYHIISIVAKDDTDRLVPGQEDAFA 2232

Query: 95   -----GDISLMQCLDYETEDSYRFTVYATD--------TLMTTSATVNISVVNVNDWDPR 141
                 G + +   L+ E   +Y  T+  TD        ++   +A + +++++VND  P+
Sbjct: 2233 VNINTGSVMVKSPLNRELVATYEVTLSVTDNASDLPERSVSVPNAKLTVNILDVNDNTPQ 2292

Query: 142  FRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDSGHI 199
            F+      +   I L   TPG+ +  V A D DKG    +T SL         +   G++
Sbjct: 2293 FKPFGITYYTEQI-LEGATPGTTLIAVAAVDPDKGLNGLITYSL-------LDLVPPGYV 2344

Query: 200  SIVDLSALNTSTIQLV-----------VVATDTGNPPRQASVPAIMH 235
             + D SA      Q V           V A+D G+PPR A +P  + 
Sbjct: 2345 QLEDPSAGKVIANQTVDYEEVHWLNFTVRASDNGSPPRAAEIPVYLE 2391



 Score = 44.3 bits (103), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 63/217 (29%), Positives = 97/217 (44%), Gaps = 40/217 (18%)

Query: 45   FSKNEYSVSALENLPVNY-VLLTVTTNKPRDL--RVKYWLSNDYGERFSIS------RQG 95
            FS    +V  LEN P  + VL  + T++   L   + Y +     +RF I       R G
Sbjct: 2069 FSPAVLTVHLLENCPPGFSVLQVMATDEDSGLNGELVYRIEAGAQDRFLIHPVTGVIRVG 2128

Query: 96   DISLMQCLDYETEDSYRFTVYATDTL---MTTSATVNISVVNVNDWDPRFRYPQYELFLP 152
            + ++    D E +DSYR TV ATD     ++ +A V I + ++ND  P F  P   + + 
Sbjct: 2129 NATI----DREEQDSYRLTVVATDRATVPLSGTAIVTILIDDINDSRPEFLNPIQTVSV- 2183

Query: 153  HIPLADLTPGSVIGKVEAADGDKGDRV------------TLSLRGPYEKMFSIN-DSGHI 199
               L    PG+VI  V A D D   ++            T  L    E  F++N ++G  
Sbjct: 2184 ---LESAEPGTVIANVTAIDLDLNPKLEYHIISIVAKDDTDRLVPGQEDAFAVNINTG-- 2238

Query: 200  SIVDLSALN---TSTIQLVVVATDTGN--PPRQASVP 231
            S++  S LN    +T ++ +  TD  +  P R  SVP
Sbjct: 2239 SVMVKSPLNRELVATYEVTLSVTDNASDLPERSVSVP 2275



 Score = 42.7 bits (99), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 35/104 (33%), Positives = 50/104 (48%), Gaps = 8/104 (7%)

Query: 95   GDISLMQCLDYETEDSYRFTVYATDTLMTTSAT---VNISVVNVNDWDPRFRYPQYELFL 151
            G +   Q +DYE      FTV A+D      A    V + +V+VND +P F  P Y++ +
Sbjct: 2352 GKVIANQTVDYEEVHWLNFTVRASDNGSPPRAAEIPVYLEIVDVNDNNPIFDQPFYQVAI 2411

Query: 152  PHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSIN 194
                L D+  G+VI  V A D D G+   +    G  E  F+IN
Sbjct: 2412 ----LEDVPVGTVILTVTATDADSGNFALIEYSLGDGEGKFAIN 2451



 Score = 42.7 bits (99), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 54/199 (27%), Positives = 89/199 (44%), Gaps = 26/199 (13%)

Query: 44  QFSKNEYSVSALENLPVNYVL--LTVTTNKPRDLRV----KYWLSNDYGERF-----SIS 92
           +F+ +EYSV+  E   V + L       +K  +L +    + +L  +    F     S+ 
Sbjct: 347 EFNSSEYSVAITELAQVGFALPLFIQVVDKDENLGLNSMFEVYLVGNNSHHFIISPTSVQ 406

Query: 93  RQGDISLMQC--LDYETEDSYRFTVYATDTL--MTTSATVNISVVNVNDWDPRFRYPQYE 148
            + DI +     LDYET D Y F ++A +++      A V I+++N ND  P F  P Y 
Sbjct: 407 GKADIRIRVAIPLDYETVDRYDFDLFANESVPDHVGYAKVKITLINENDNRPIFSQPLYN 466

Query: 149 LFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDSGHISIVDLSA 206
           + L      ++T G+ +  V A D D G    V        ++     D+G I ++  + 
Sbjct: 467 VSL----YENVTVGTSVLTVLATDNDVGTFGEVNYFFSDDPDRFSLDKDTGLILLI--AK 520

Query: 207 LNTSTIQ---LVVVATDTG 222
           L+   IQ   L V+A D G
Sbjct: 521 LDFELIQRFTLTVIARDGG 539



 Score = 39.7 bits (91), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 58/203 (28%), Positives = 87/203 (42%), Gaps = 22/203 (10%)

Query: 31  LIVSKAGTSLRELQFSKNEYSVSAL---ENLPVNYVLLTVTTNKPRDLR---VKYWLSND 84
           +++S     +  L F  N +  + L   E+ PV     +VT    RD+    + + +S +
Sbjct: 16  VLISGCWGQVNRLPFFTNHFFDTYLLISEDTPVGS---SVTQLLARDMDNDPLVFGVSGE 72

Query: 85  YGERFSISR--QGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRF 142
              RF       G + L Q LD ET+  +      +D     +  VNI V +VND  P F
Sbjct: 73  EASRFFAVEPDTGVVWLRQPLDRETKSEFTVEFSVSDHQGVITRKVNIQVGDVNDNAPTF 132

Query: 143 RYPQYELFLPHIPLADLTP-GSVIGKVEAADGD--KGDRVTLSLRGPYEKMFSINDSGHI 199
               Y + +P     + TP G+ I  V A D D   G  V  S + P  + F+I+ +  I
Sbjct: 133 HNQPYSVRIP-----ENTPVGTPIFIVNATDPDLGAGGSVLYSFQPP-SQFFAIDSARGI 186

Query: 200 SIV--DLSALNTSTIQLVVVATD 220
             V  +L    T   QL V ATD
Sbjct: 187 VTVIRELDYETTQAYQLTVNATD 209


>gi|426231561|ref|XP_004009807.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin-7-like [Ovis aries]
          Length = 1185

 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 62/203 (30%), Positives = 92/203 (45%), Gaps = 21/203 (10%)

Query: 37  GTSLRELQFSKNEYSVSALENLPVNYV--LLTVTTNKPRDLRVKYWLSNDYGERFSIS-R 93
           G S+ E+ F +N        N+P   V  +L    +  ++  + Y L +     F+I   
Sbjct: 466 GQSVVEVYFPEN--------NIPGERVATVLATDADSGKNAEIAYSLDSSVMGIFAIDPD 517

Query: 94  QGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELF 150
            GDI +   LD E  D Y F V A D    ++  S TV + V + ND DP+F    +  +
Sbjct: 518 SGDILVNTVLDREQTDRYEFKVNARDKGIPVLQGSTTVIVQVADKNDNDPKFMQDVFTFY 577

Query: 151 LPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSI-NDSGHI-SIVDLSAL 207
           +      +L P S +G V   D DKG    +SL       +FSI ND+G I S +     
Sbjct: 578 VKE----NLQPNSPVGMVTVMDADKGRNAEMSLYIEENSNIFSIENDTGTIYSTMSFDRE 633

Query: 208 NTSTIQLVVVATDTGNPPRQASV 230
           + +T    V A D G+PPR A+ 
Sbjct: 634 HQTTYTFRVKAVDGGDPPRSATA 656



 Score = 45.4 bits (106), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 77/316 (24%), Positives = 136/316 (43%), Gaps = 46/316 (14%)

Query: 30  TLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVT---TNKPRDLRVKYWLSNDYG 86
           T+IV  A  +  + +F ++ ++    ENL  N  +  VT    +K R+  +  ++  +  
Sbjct: 554 TVIVQVADKNDNDPKFMQDVFTFYVKENLQPNSPVGMVTVMDADKGRNAEMSLYIEEN-S 612

Query: 87  ERFSISRQ-GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRF 142
             FSI    G I      D E + +Y F V A D      + +ATV++ V++ ND  P  
Sbjct: 613 NIFSIENDTGTIYSTMSFDREHQTTYTFRVKAVDGGDPPRSATATVSLFVMDENDNAPTV 672

Query: 143 RYPQ---YELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIND- 195
             P+   Y L  P   +      +V+  V A D D G    L+   + G   K+F I+  
Sbjct: 673 TLPRNISYTLLPPSSNVR-----TVVATVLATDSDDGINADLNYSIVGGNPFKLFEIDST 727

Query: 196 SGHISIV-DLSALNTSTIQLVVVATDTGNPPRQASVPAIMHFPEA------IVQQASSKL 248
           SG +S+V  L+  +    +LVV   D+G P +  +    +   E+      I  Q +  L
Sbjct: 728 SGVVSLVGKLTQKHYGLHRLVVQVNDSGQPSQSTTTLVHVFVNESVSNATVIDSQIARSL 787

Query: 249 NSGTSSTVL-------------IILGVVLIVLGFVIILLILYIHKNKHTKN-NGPPGSSH 294
           ++  +  +              I++GVV  ++  ++I+LI+ + +   +KN NG      
Sbjct: 788 HTPLTQDIAGDPSYEISKQRLSIVIGVVAGIMTVILIILIVVMARYCRSKNKNGYEAGKK 847

Query: 295 SKNDSFLSNVILPEKH 310
              D F      P++H
Sbjct: 848 DHEDFF-----TPQQH 858


>gi|410957820|ref|XP_003985522.1| PREDICTED: protocadherin-7 isoform 2 [Felis catus]
          Length = 1234

 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 62/203 (30%), Positives = 92/203 (45%), Gaps = 21/203 (10%)

Query: 37  GTSLRELQFSKNEYSVSALENLPVNYV--LLTVTTNKPRDLRVKYWLSNDYGERFSIS-R 93
           G S+ E+ F +N        N+P   V  +L    +  ++  + Y L +     F+I   
Sbjct: 515 GQSVVEVYFPEN--------NIPGERVATVLATDADSGKNAEIAYSLDSSVMGIFAIDPD 566

Query: 94  QGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELF 150
            GDI +   LD E  D Y F V A D    ++  S TV + V + ND DP+F    +  +
Sbjct: 567 SGDILVNTVLDREQTDRYEFKVNAKDKGIPVLQGSTTVIVQVADKNDNDPKFMQDVFTFY 626

Query: 151 LPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSI-NDSGHI-SIVDLSAL 207
           +      +L P S +G V   D DKG    +SL       +FSI ND+G I S +     
Sbjct: 627 VKE----NLQPNSPVGMVTVMDADKGRNAEMSLYIEENSNIFSIENDTGTIYSTMSFDRE 682

Query: 208 NTSTIQLVVVATDTGNPPRQASV 230
           + +T    V A D G+PPR A+ 
Sbjct: 683 HQTTYTFRVKAVDGGDPPRSATA 705



 Score = 43.1 bits (100), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 41/160 (25%), Positives = 72/160 (45%), Gaps = 26/160 (16%)

Query: 93  RQGDISLMQCLDYETEDSYRFTVY---ATDTLMTTSATVNISVVNVNDWDPRFRYPQYEL 149
           +Q  + +   LD E  DSY  T+      D   ++ A + + + +VND  PRF    YE 
Sbjct: 235 KQPQLIVKGALDREQRDSYELTLRVRDGGDPPRSSQAILRVLITDVNDNSPRFEKSVYEA 294

Query: 150 FLPHIPLADLTPGSVIGKVEAADGDKG---------DRVTLSLRGPYEKMFSIND-SGHI 199
            L      +  PG+ I ++ AAD D G            T S+R    ++  +++ SG +
Sbjct: 295 DLAE----NSAPGTPILQLRAADLDVGVNGQIEYVFGAATESVR----RLLRLDETSGWL 346

Query: 200 SI---VDLSALNTSTIQLVVVATDTGNPPRQASVPAIMHF 236
           S+   +D   +N   ++  V+A D G PP+      +++ 
Sbjct: 347 SVLHRIDREEVN--QLRFTVMARDRGQPPKTDKATVVLNI 384


>gi|395853835|ref|XP_003799406.1| PREDICTED: protocadherin-7 isoform 2 [Otolemur garnettii]
          Length = 1255

 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 62/203 (30%), Positives = 92/203 (45%), Gaps = 21/203 (10%)

Query: 37  GTSLRELQFSKNEYSVSALENLPVNYV--LLTVTTNKPRDLRVKYWLSNDYGERFSIS-R 93
           G S+ E+ F +N        N+P   V  +L    +  ++  + Y L +     F+I   
Sbjct: 536 GQSVVEVYFPEN--------NIPGQRVATVLATDADSGKNAEIAYSLDSSVMGVFAIDPD 587

Query: 94  QGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELF 150
            GDI +   LD E  D Y F V A D    ++  S TV + V + ND DP+F    +  +
Sbjct: 588 SGDILVNTVLDREQTDRYEFKVNAKDKGIPVLQGSTTVIVQVADKNDNDPKFMQDVFTFY 647

Query: 151 LPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSI-NDSGHI-SIVDLSAL 207
           +      +L P S +G V   D DKG    +SL       +FSI ND+G I S +     
Sbjct: 648 VKE----NLQPNSPVGMVTVMDADKGRNAEMSLFIQENSNIFSIENDTGTIYSTMSFDRE 703

Query: 208 NTSTIQLVVVATDTGNPPRQASV 230
           + +T    V A D G+PPR A+ 
Sbjct: 704 HQTTYTFRVKAVDGGDPPRSATA 726



 Score = 43.1 bits (100), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 41/150 (27%), Positives = 69/150 (46%), Gaps = 26/150 (17%)

Query: 93  RQGDISLMQCLDYETEDSYRFTVY---ATDTLMTTSATVNISVVNVNDWDPRFRYPQYEL 149
           +Q  + +   LD E  DSY  T+      D   ++ A + + + +VND  PRF    YE 
Sbjct: 256 KQPQLIVKGALDREQRDSYELTLRVRDGGDPPRSSQAILRVLITDVNDNSPRFEKSVYEA 315

Query: 150 FLPHIPLADLTPGSVIGKVEAADGDKG---------DRVTLSLRGPYEKMFSIND-SGHI 199
            L      +  PG+ I ++ AAD D G            T S+R    ++  +++ SG +
Sbjct: 316 DLAE----NSAPGTPILQLRAADLDVGVNGQIEYVFGAATESVR----RLLRLDETSGWL 367

Query: 200 SI---VDLSALNTSTIQLVVVATDTGNPPR 226
           S+   +D   +N   ++  V+A D G PP+
Sbjct: 368 SVLHRIDREEVN--QLRFTVMARDRGQPPK 395


>gi|327267535|ref|XP_003218556.1| PREDICTED: cadherin-23-like [Anolis carolinensis]
          Length = 3346

 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 59/195 (30%), Positives = 92/195 (47%), Gaps = 20/195 (10%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGERFSIS-RQGDISLM 100
            FS+  Y     E++P+  ++L V     +  R  +++Y L +  G +F I+   GDI ++
Sbjct: 2387 FSQPSYQKPVFEDVPLGTIILRVRATDADSGRFAQIQYSLGDGEG-KFGINPNTGDIYIL 2445

Query: 101  QCLDYETEDSYRFTVYATDT-------LMTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
              LD E +D Y  T  A D            S  V I+V+++ND  P+F   QY   +  
Sbjct: 2446 SALDREKKDHYTLTAVARDNPGDISSNRRENSVQVLITVLDINDCRPQFAKKQYSTSV-- 2503

Query: 154  IPLADLTPGSVIGKVEAADGDKGDR--VTLSLRGPYEKMFSIN-DSGHISIVDLSALNTS 210
                +   G+ +  + A D D+GD   VT ++ GP  + F I+ DSG I+       +  
Sbjct: 2504 --YENEPAGTSVITMSATDHDEGDNGVVTYNMEGPGVEAFKIHKDSGLIT-TRRRLQSYE 2560

Query: 211  TIQLVVVATDTGNPP 225
               L VVATD G PP
Sbjct: 2561 RFNLTVVATDKGRPP 2575



 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 65/203 (32%), Positives = 102/203 (50%), Gaps = 22/203 (10%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRDL----RVKYWLSNDYGERFSISRQ-GDISL 99
           FS+  Y+++  EN+ V   +L V      D+    +V Y+ S+D  +RFS+ +  G I+L
Sbjct: 445 FSQVLYNITLFENVTVATTVLRVLATD-NDVGSYGKVSYFFSDD-PDRFSLDKDTGVITL 502

Query: 100 MQCLDYETEDSYRFTVYATDTL-MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLAD 158
           +  LD+ET   Y  TV A D     T+  V I+V +VND  P F   Q + +L  +   +
Sbjct: 503 IGRLDFETTQRYTLTVIARDGGGEETTGRVRINVQDVNDNIPTF---QKDSYLGALRENE 559

Query: 159 LTPGSVIGKVEAADGDK--GDRVTLSL--RGPYEKMFSINDS---GHISIV---DLSALN 208
            +   V+ +V A+D D    +++T S+     +   F IN S   G IS+V   D   + 
Sbjct: 560 PSVTQVV-RVRASDEDSPPNNQITYSIVYASIFRNYFEINLSDGYGVISVVRPLDYEQVL 618

Query: 209 TSTIQLVVVATDTGNPPRQASVP 231
              I L V+A D G PP  ++VP
Sbjct: 619 NGVIYLTVMAKDAGIPPLNSTVP 641



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 60/202 (29%), Positives = 100/202 (49%), Gaps = 20/202 (9%)

Query: 50   YSVSALENLPVNY--VLLTVT-TNKPRDLRVKYWLSN-DYGERFSIS-RQGDISLMQCLD 104
            Y+VS  EN+P ++  V L  T  +   +  + Y+++  +   +FS+  R G +  +  LD
Sbjct: 985  YNVSLPENIPRDFKVVRLNCTDADTGLNAELSYFITGGNQDGKFSVGFRDGVVRTVVNLD 1044

Query: 105  YETEDSYRFTVYATDT-----LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADL 159
             ET  SY   + A D        T +ATV+++V++VND  P F    YE  +P     D+
Sbjct: 1045 RETMPSYTLILEAIDNGPTGKRRTGTATVHVTVLDVNDNRPYFLQSSYEATVPE----DI 1100

Query: 160  TPGSVIGKVEAADGDKG--DRVTLSL-RGPYEKMFSINDSGHISIVDLSALN---TSTIQ 213
               S I +V+A D D+G   RV   + +G +   F IN S  + +  L  L+    S+  
Sbjct: 1101 PDYSSIVQVKATDADEGINGRVWYRIVKGNHFNNFRINPSSGLVMRGLRVLDRERNSSHV 1160

Query: 214  LVVVATDTGNPPRQASVPAIMH 235
            L V A ++   P ++SV  I++
Sbjct: 1161 LEVEAYNSEQGPMRSSVRVIVY 1182



 Score = 46.2 bits (108), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 42/145 (28%), Positives = 69/145 (47%), Gaps = 21/145 (14%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTTNKPRD-----LRVKYWLSNDYGERFSI-SRQGDI 97
           +F    YSV   EN PV   +  V    P       +   +  S+++   F+I S +G +
Sbjct: 116 RFHNQPYSVRIPENTPVGTPIFIVNATDPDQGAGGSVLYSFQPSSNF---FTIDSGRGIV 172

Query: 98  SLMQCLDYETEDSYRFTVYATD----TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
           S+++ LDYE   +Y+  V ATD      ++T A + I++ +V D DP F      + LP+
Sbjct: 173 SVIRALDYEVTQAYQLQVNATDQDKTKPLSTLANLAITITDVQDMDPIF------INLPY 226

Query: 154 IP--LADLTPGSVIGKVEAADGDKG 176
                 +  PG+ +  + A D DKG
Sbjct: 227 STNIYENSPPGTTVRMITAIDQDKG 251



 Score = 46.2 bits (108), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 61/211 (28%), Positives = 98/211 (46%), Gaps = 30/211 (14%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTT---NKPRDL---RVKYWLSNDYGERFSISRQGDIS 98
           FSK  Y V+ +E++     +L +     ++ R+     + Y L      R + +R G+I+
Sbjct: 656 FSKPSYIVTVMEDIMAGATVLFLNATDLDRSREYGQESIIYSLEGSSHFRIN-ARSGEIT 714

Query: 99  LMQCLDYETEDSYRFTVYATD-----TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
               LD E +  Y   V A D        T  ATVNI+++++ND  P ++   Y      
Sbjct: 715 TTSLLDREAKSEYILIVRAVDGGVGHNQKTGIATVNITLLDINDNYPVWKDEPY-----F 769

Query: 154 IPLADLT-PGSVIGKVEAADGDKGDRVTL--SLRGPYEKMFSIND-SGHIS----IVDLS 205
           I L ++T P S +  V A D D  +  +L  S+R P  K +S+N+ +G I     ++D  
Sbjct: 770 INLVEMTPPNSDVTTVVAFDPDLAENGSLVYSIRPP-NKFYSLNNTTGKIRTTGVVLDRE 828

Query: 206 ALNTSTIQL----VVVATDTGNPPRQASVPA 232
             N    +L    VV  TD G PP +A+  A
Sbjct: 829 NPNPQEAELMRKIVVSVTDRGRPPLRATSSA 859



 Score = 46.2 bits (108), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 47/163 (28%), Positives = 78/163 (47%), Gaps = 12/163 (7%)

Query: 29   ATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDY 85
            ATL V+    +  +  F     +   LEN P    +L VT    +   + ++ Y + +  
Sbjct: 2038 ATLTVAILDDNDNQPAFHPAVLTARLLENSPPGISVLRVTATDMDSGLNQQLNYRIESGA 2097

Query: 86   GERFSI-SRQGDISLMQC-LDYETEDSYRFTVYATDTL---MTTSATVNISVVNVNDWDP 140
             ++F I +  G IS+    +D E +D+YR TV A D     ++ +ATVNI + ++ND  P
Sbjct: 2098 QDKFLINANTGVISVANTTIDREEKDNYRLTVVAVDRGTPPLSGTATVNILIDDINDSQP 2157

Query: 141  RFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSL 183
             F  P + + +P       T G++I +V A D D   R+   L
Sbjct: 2158 EFVNPIHTVSVPE----SATVGTLIAEVTAIDRDLNPRLEYYL 2196



 Score = 45.1 bits (105), Expect = 0.057,   Method: Compositional matrix adjust.
 Identities = 47/135 (34%), Positives = 64/135 (47%), Gaps = 13/135 (9%)

Query: 92  SRQGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFL 151
           S  G + L Q LD ET+  +      +D+      +VNI V +VND  PRF    Y + +
Sbjct: 67  SMTGVVWLRQPLDRETKSEFTVEFSVSDSQGVIKGSVNIQVGDVNDNAPRFHNQPYSVRI 126

Query: 152 PHIPLADLTP-GSVIGKVEAADGDK--GDRVTLSLRGPYEKMFSINDSGHISIVDLSALN 208
           P     + TP G+ I  V A D D+  G  V  S + P    F+I DSG   +  + AL+
Sbjct: 127 P-----ENTPVGTPIFIVNATDPDQGAGGSVLYSFQ-PSSNFFTI-DSGRGIVSVIRALD 179

Query: 209 ---TSTIQLVVVATD 220
              T   QL V ATD
Sbjct: 180 YEVTQAYQLQVNATD 194



 Score = 43.9 bits (102), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 56/226 (24%), Positives = 98/226 (43%), Gaps = 41/226 (18%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTTNKPRDL--RVKYWLSN------------DYGERF 89
            +F    ++VS  E+  V  ++  VT    RDL  R++Y+L              D    F
Sbjct: 2158 EFVNPIHTVSVPESATVGTLIAEVTAID-RDLNPRLEYYLIEILAKDDTDALVPDQQGAF 2216

Query: 90   SIS-RQGDISLMQCLDYETEDSYRFTVYATD--------TLMTTSATVNISVVNVNDWDP 140
            ++  R G + +   L+ E   +Y  T+   D        ++   +A + ++V++VND  P
Sbjct: 2217 AVDFRTGAVKVKSTLNRELVATYEVTISVYDNASDVVDRSVSVPNAKLTVNVLDVNDNAP 2276

Query: 141  RFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSGHIS 200
            RFR      F   I L   TPG+ +  V A D DKG    ++    YE + +++  G++ 
Sbjct: 2277 RFRPFGATYFTERI-LEGATPGTTLISVSAIDPDKGVNGQIT----YE-ILNLSPEGYLQ 2330

Query: 201  IVDLSALNTST-----------IQLVVVATDTGNPPRQASVPAIMH 235
            + D+SA    +           +   V A+D G P + A +P  + 
Sbjct: 2331 LEDISAGKVVSNRTVDYEEVQWLNFTVRASDNGTPRKLAEMPVYLE 2376



 Score = 41.6 bits (96), Expect = 0.64,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 94/207 (45%), Gaps = 26/207 (12%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGERFSISRQ-GDISL 99
            QF+K +YS S  EN P    ++T++    ++  +  V Y +     E F I +  G I+ 
Sbjct: 2493 QFAKKQYSTSVYENEPAGTSVITMSATDHDEGDNGVVTYNMEGPGVEAFKIHKDSGLITT 2552

Query: 100  MQCLDYETEDSYRFTVYATDTL---MTTSATVNISVVNVNDWDPRFRYPQYELFL---PH 153
             + L  ++ + +  TV ATD     +  +  + + V+++ND  P F  P     L     
Sbjct: 2553 RRRL--QSYERFNLTVVATDKGRPPLWGTTMLQVDVIDINDNRPMFIRPPNGTILHIKEE 2610

Query: 154  IPLADLTPGSVIGKVEAADGDKG----DRVTLSLRGPYEK---MFSIN-DSGHI-SIVDL 204
            IPL      S + +V A D D+G     + TL   G   K    F+I+ +SG I + + L
Sbjct: 2611 IPLR-----SNVYEVYATDKDEGLNGAVQYTLLKTGAGNKDWEHFTIDPNSGLIQTAMRL 2665

Query: 205  SALNTSTIQLVVVATDTGNPPRQASVP 231
                 +   L++VA D G PP +   P
Sbjct: 2666 DREKQAVYSLIIVACDQGQPPYETMQP 2692



 Score = 41.2 bits (95), Expect = 0.93,   Method: Compositional matrix adjust.
 Identities = 40/121 (33%), Positives = 59/121 (48%), Gaps = 15/121 (12%)

Query: 95   GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYEL-F 150
            G +   + +DYE      FTV A+D           V + +V++ND +P F  P Y+   
Sbjct: 2337 GKVVSNRTVDYEEVQWLNFTVRASDNGTPRKLAEMPVYLEIVDINDNNPIFSQPSYQKPV 2396

Query: 151  LPHIPLADLTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSIN-DSGHISIVDLSAL 207
               +PL     G++I +V A D D G   ++  SL G  E  F IN ++G I I  LSAL
Sbjct: 2397 FEDVPL-----GTIILRVRATDADSGRFAQIQYSL-GDGEGKFGINPNTGDIYI--LSAL 2448

Query: 208  N 208
            +
Sbjct: 2449 D 2449



 Score = 40.4 bits (93), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 50/197 (25%), Positives = 87/197 (44%), Gaps = 22/197 (11%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRV------KYWLSNDYGERF-----SIS 92
           +F+ +EYSV+  E   V + L      + +D  +      + +L  +    F     SI 
Sbjct: 332 EFNSSEYSVAIPELAQVGFALPLFIQVQDKDEHLGLNSVFEVYLVGNNSNHFIISPTSIQ 391

Query: 93  RQGDISLMQC--LDYETEDSYRFTVYATDTL--MTTSATVNISVVNVNDWDPRFRYPQYE 148
            + DI +     LD+ET   Y F+++A ++L      A V I+++N ND  P F    Y 
Sbjct: 392 GKADIRIRVAVPLDFETISRYEFSLFANESLPDHVGFARVKINLINENDNRPIFSQVLYN 451

Query: 149 LFLPHIPLADLTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSINDSGHISIVD-LS 205
           + L      ++T  + + +V A D D G   +V+       ++     D+G I+++  L 
Sbjct: 452 ITL----FENVTVATTVLRVLATDNDVGSYGKVSYFFSDDPDRFSLDKDTGVITLIGRLD 507

Query: 206 ALNTSTIQLVVVATDTG 222
              T    L V+A D G
Sbjct: 508 FETTQRYTLTVIARDGG 524


>gi|443716925|gb|ELU08218.1| hypothetical protein CAPTEDRAFT_222745 [Capitella teleta]
          Length = 4539

 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 69/251 (27%), Positives = 117/251 (46%), Gaps = 27/251 (10%)

Query: 32   IVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYG---ER 88
            +V +  TS    +F+  E     +E+ PV    L V      D   K W S   G   + 
Sbjct: 1318 VVDRPVTSANPPRFNALEPVARVMEDDPVGTSSLIVGAED--DDGDKIWFSISDGNEDDT 1375

Query: 89   FSIS-RQGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQY 147
            FSI    G++ L + LD+ET + Y  TV  TD + T   TV I V+++ND  P+F   +Y
Sbjct: 1376 FSIDPENGNVLLAKALDWETRNEYNITVRITDMVFTAHTTVLIQVLDINDHAPQFSQSEY 1435

Query: 148  ELFLPHIPLADLTPGSV-IGKVEAADGDKGDRVTLSLRGPYEK----MFSIN-DSGHISI 201
                  + +++ TP  V I  +EA+D D+  R+  ++    ++     F IN ++G I+ 
Sbjct: 1436 S-----VGVSESTPAGVDILTLEASDLDEDKRLFFTILSASDQSSIDKFKINSETGVITT 1490

Query: 202  VD-LSALNTSTIQLVVVATDTGNPPRQASVPAIM-------HFPEAIVQQASSKL--NSG 251
             + L     S  QLVV+  D G P +++    ++       H PE +  +   ++  ++ 
Sbjct: 1491 RERLDREAASHHQLVVMVRDQGTPSKRSLARVVIVVNDHNDHHPEFVTSEVEGRVYGSAE 1550

Query: 252  TSSTVLIILGV 262
              + VL +L V
Sbjct: 1551 IGTQVLTVLAV 1561



 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 57/197 (28%), Positives = 89/197 (45%), Gaps = 22/197 (11%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWL------SNDYGERFSISRQGDIS 98
            F  N+ S    EN  +  ++ TVT +    L  KY +       ++  ERF I+  G I 
Sbjct: 2687 FEDNQPSYFIYENQEIGSIIATVTAHSNHSL--KYSIIAGEKPESNNPERFLINNFGKIE 2744

Query: 99   LMQCLDYETEDSYRFTVYA---TDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIP 155
            +   LD E  DS R T+ A   T   +     V + ++++ND  P F    Y + +    
Sbjct: 2745 VYDALDREVVDSVRLTIRAETETSPALVAETVVTVKIMDINDNPPVFESQHYAVTI---- 2800

Query: 156  LADLTPGSVIGKVEAADGDKGDRVTLSLRGPYE-----KMFSIN-DSGHIS-IVDLSALN 208
            + +   GS + +VEA D D G    LS     E      +F+++ +SG IS +V L    
Sbjct: 2801 MENAEIGSQVLRVEAHDADTGANSDLSYSYLIEDAQISNIFALDAESGQISTLVSLDREA 2860

Query: 209  TSTIQLVVVATDTGNPP 225
              T +  V A+D G+PP
Sbjct: 2861 RDTYEFSVTASDRGSPP 2877



 Score = 55.5 bits (132), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 65/195 (33%), Positives = 88/195 (45%), Gaps = 20/195 (10%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYG----ERFSISRQGD 96
            +F ++ Y  S  E+  V   LL VT    +   + ++ Y +S D      E FS+  +  
Sbjct: 3205 EFERSVYLESIPEDAAVGSSLLQVTATSLDTGINAQMTYTISEDNALLNLETFSMDPESG 3264

Query: 97   ISLMQC-LDYETEDSYRFTVYATDTL---MTTSATVNISVVNVNDWDPRFRYPQYELFLP 152
            I   Q  LDYET   Y  TV ATD     +T SAT+NI+V + ND  P F    Y L +P
Sbjct: 3265 ILRHQKPLDYETVREYSLTVLATDGGEPPLTASATLNINVTDCNDQAPIFDQSVYRLTIP 3324

Query: 153  HIPLADLTPGSVIGKVEAADGDKGDRVTLSL---RGPYEKMFSIND-SGHISIVD-LSAL 207
                 +   G  I KV A D D      +S     G     F +N   G IS+   L   
Sbjct: 3325 E----NTRVGQSILKVSATDLDSAAYAVISYAIGSGDDLGQFEVNAPDGVISVAQPLDRE 3380

Query: 208  NTSTIQLVVVATDTG 222
            + S   LV++ATDTG
Sbjct: 3381 SLSHYSLVILATDTG 3395



 Score = 55.5 bits (132), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 64/224 (28%), Positives = 107/224 (47%), Gaps = 23/224 (10%)

Query: 28   LATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYW------L 81
             AT+ +S   ++L +  F ++ Y +   ENLP +  +  V+ +   + R  Y       +
Sbjct: 2460 FATVHISVDNSNLHDPVFLES-YDIYIAENLPSDTFVAAVSASD--EDRGDYGSVSYSIV 2516

Query: 82   SNDYGERFSISRQ-GDISLMQCLDYETEDSYRFTVYATDTLMTTS-ATVNISVVNVNDWD 139
            S +  + F I    G+I  ++ LD E    +   V ATD        TV ++V +  D +
Sbjct: 2517 SEEALDLFWIDETTGEIFTLEALDREKHPQHLVPVAATDGGGRMGYVTVIVNVADQGDSE 2576

Query: 140  PRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTL------SLRGPYEKMFSI 193
            P+F+  +Y+  +     AD   GSVI KVEA+D D G    L      S   P  ++ +I
Sbjct: 2577 PQFKLQEYKANV----FADAEIGSVILKVEASDDDLGPNGDLVYALVDSGITPASEVLAI 2632

Query: 194  ND-SGHISIVD-LSALNTSTIQLVVVATDTGNPPRQASVPAIMH 235
            +  SG IS+ + L++     +QL V A D G+PP  + VP  ++
Sbjct: 2633 DPVSGEISVKERLASREHQLLQLFVRAQDQGSPPMHSDVPVAIY 2676



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 62/210 (29%), Positives = 101/210 (48%), Gaps = 25/210 (11%)

Query: 13   LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKP 72
            L VRA   D    +A A + ++    +    +F+ N Y+V+  E + +   ++TVTT   
Sbjct: 2235 LTVRATDIDTG-SFAEAAVHINLQDENDHPPRFTSNAYTVTVSEVVAIGTPIITVTTTD- 2292

Query: 73   RDLRVK----YWLSND-----YGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDTL- 121
            RD  V     Y L  +         F I ++QG +   Q LD+E  D   F V ATD   
Sbjct: 2293 RDSGVNALAHYELREEAEGGAMSNHFHIDTQQGTVFTKQRLDHEHYDQLSFLVIATDHGI 2352

Query: 122  --MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTP-GSVIGKVEAADGDKGD- 177
              +++   V + + ++ND  PRF +P YE     + ++DL   G  +  V A+D D  D 
Sbjct: 2353 PPLSSEVRVRVVITDMNDNPPRFDHPAYE-----VAISDLAERGQFVTSVMASDDDASDV 2407

Query: 178  -RVTLSLRGPYEKM-FSIND-SGHISIVDL 204
             R+T S+ G   K  F +++ SG +S+ +L
Sbjct: 2408 GRLTYSIVGGNTKQTFMLDEFSGVLSLSNL 2437



 Score = 52.4 bits (124), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 54/198 (27%), Positives = 93/198 (46%), Gaps = 16/198 (8%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTTNKPRDL----RVKYWL-SNDYGERFSISRQGDIS 98
            QF ++EY  +  E+     ++L VT++   DL    +V Y +   D   +F++   G++ 
Sbjct: 2897 QFEQDEYEGAVNEDALPGTIILMVTSSDA-DLSPNNQVSYSIREGDPLGQFNVRHTGELY 2955

Query: 99   LMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLAD 158
            + + LD E +  Y  T+ A+D    TS  V +S+++ ND  P      Y+  +      D
Sbjct: 2956 VNKQLDRERKFWYELTLVASDGAHVTSTQVFVSILDANDNAPVCEQASYQKIISE----D 3011

Query: 159  LTPGSVIGKVEAADGD----KGDRVTLSLRGPYEKMFSIND-SGHISIVD-LSALNTSTI 212
            +  GS + +V A+D D    +  R+   L G +  +F +N+ +G ISI + L        
Sbjct: 3012 VDTGSFLLRVSASDADEKGTRNSRIKFLLDGNHGNVFHMNERTGIISIKNSLDRETAPDY 3071

Query: 213  QLVVVATDTGNPPRQASV 230
             L V A D G    Q+ V
Sbjct: 3072 TLTVTAVDGGGLFCQSEV 3089



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 47/170 (27%), Positives = 81/170 (47%), Gaps = 17/170 (10%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVT-----TNKPRDLRVKYWLSN-DYGERFSI-SRQGDI 97
            F    Y+V+ +EN  +   +L V      T    DL   Y + +      F++ +  G I
Sbjct: 2791 FESQHYAVTIMENAEIGSQVLRVEAHDADTGANSDLSYSYLIEDAQISNIFALDAESGQI 2850

Query: 98   SLMQCLDYETEDSYRFTVYATDTL---MTTSATVNISVVNVNDWDPRFRYPQYELFLPHI 154
            S +  LD E  D+Y F+V A+D     +++   V ISV + ND  P+F   +YE  +   
Sbjct: 2851 STLVSLDREARDTYEFSVTASDRGSPPLSSVTLVKISVTDFNDNPPQFEQDEYEGAVNE- 2909

Query: 155  PLADLTPGSVIGKVEAADGD--KGDRVTLSLR-GPYEKMFSINDSGHISI 201
               D  PG++I  V ++D D    ++V+ S+R G     F++  +G + +
Sbjct: 2910 ---DALPGTIILMVTSSDADLSPNNQVSYSIREGDPLGQFNVRHTGELYV 2956



 Score = 51.6 bits (122), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 61/224 (27%), Positives = 99/224 (44%), Gaps = 31/224 (13%)

Query: 28   LATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLS----- 82
            ++ L++S+A  S     F +  Y V   E+LP+  V +T+    P   ++ Y ++     
Sbjct: 2146 VSILVMSRATPS-----FDQPFYQVDISESLPIGSVAVTIHAQSPTGGKLIYSITAGDKY 2200

Query: 83   NDYGERFS----ISRQGDISLMQCLDYETEDSYRFTVYAT--DTLMTTSATVNISVVNVN 136
            +++G  FS    +   G I++   LDYE   SY+ TV AT  DT     A V+I++ + N
Sbjct: 2201 DEFGVHFSTVFDVDINGSITIADKLDYELITSYQLTVRATDIDTGSFAEAAVHINLQDEN 2260

Query: 137  DWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLR-----GPYEK 189
            D  PRF    Y + +  +    +  G+ I  V   D D G        LR     G    
Sbjct: 2261 DHPPRFTSNAYTVTVSEV----VAIGTPIITVTTTDRDSGVNALAHYELREEAEGGAMSN 2316

Query: 190  MFSINDSGHISIVDLSALNTS---TIQLVVVATDTGNPPRQASV 230
             F I D+   ++     L+      +  +V+ATD G PP  + V
Sbjct: 2317 HFHI-DTQQGTVFTKQRLDHEHYDQLSFLVIATDHGIPPLSSEV 2359



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 58/197 (29%), Positives = 89/197 (45%), Gaps = 23/197 (11%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSN-DYGERFSI-SRQGDISLMQC 102
           F  +EYSVS  E +P    L  ++  K RD    Y +S  ++   F++ SR G +S++  
Sbjct: 334 FEHDEYSVSVEECIPPRTPLKFISA-KNRD--AAYSISQGNHLNWFTVDSRTGLLSVLHA 390

Query: 103 LDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPG 162
           LD ET D     + A     T S  V + + + ND  P F    +       P   +  G
Sbjct: 391 LDRETVDQVELVIAAQHRRHTASVNVTVLITDCNDNTPAFNSTAW-------PEVSVQEG 443

Query: 163 SVIG----KVEAADGDKGD--RVTLSLRGPYEKMFSIND-SGHI---SIVDLSALNTSTI 212
           + IG    +V A D D  D  +V+ SL       F+I+  +G I    ++D   +     
Sbjct: 444 AAIGSSVYQVHAMDADLADNGQVSYSLSNVNSVPFTIDHFTGEIKTKQVLDFETMR-RVY 502

Query: 213 QLVVVATDTGNPPRQAS 229
            LVV A+D G+P R+ S
Sbjct: 503 SLVVRASDWGSPFRRES 519



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 57/214 (26%), Positives = 97/214 (45%), Gaps = 28/214 (13%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTTNK---PRDLRVKYWLSNDYGERFSISR-QGDISL 99
            QF    YS+   E+LPV  V+LT+T N      D  V+Y L     ++F I R  G I +
Sbjct: 899  QFFPESYSIRIREDLPVGVVILTLTANDLDLGADGMVRYALIEGMDDKFEIDRLTGTIRI 958

Query: 100  MQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVND--WDPRFRYPQYELFLPHI 154
            +  LD+E++  Y     A D     ++T  +++I +V+VN+  + P F+    +      
Sbjct: 959  VNPLDFESKQLYNIIARARDRSTPALSTKCSISIEIVDVNENLYPPVFK----DFVFQGR 1014

Query: 155  PLADLTPGSVIGKVEAADGD--------KGDR--VTLSLRGPYEKMFSINDSGHI---SI 201
               +  P + + ++ A D D        + D   V     G   + F+I++SG I    I
Sbjct: 1015 VKENQPPNTSVMRLVATDADTLQNPLASRADSQIVYTITGGSGMRRFTIDNSGVIRTHGI 1074

Query: 202  VDLSALNTSTIQLVVVATDTGNPPRQASVPAIMH 235
            +D  +   +   L VVA D G  P  ++V  ++ 
Sbjct: 1075 LDRES--QAHYWLRVVACDRGTVPLCSTVEVLVE 1106



 Score = 47.0 bits (110), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 61/208 (29%), Positives = 98/208 (47%), Gaps = 34/208 (16%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDL----RVKYWLSNDYGERFSISRQ-GDISL 99
            F++ EY+V   E+   N +L+ V+ +   DL    +V Y L  D G  F + ++ G +SL
Sbjct: 3103 FTQTEYTVGISEHAQKNTLLMRVSASD-LDLGLYRKVNYALE-DNGGLFKMDQESGIVSL 3160

Query: 100  MQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
               LD E    Y  +VYA D     ++++A + ++V++ ND  P F   +  ++L  IP 
Sbjct: 3161 NGELDREAVAQYNISVYAYDQGTVRLSSAAHLIVNVLDENDNPPEF---ERSVYLESIP- 3216

Query: 157  ADLTPGSVIGKVEAADGDKG-----------DRVTLSLRGPYEKMFSINDSGHISIVDLS 205
             D   GS + +V A   D G           D   L+L     + FS++    I +    
Sbjct: 3217 EDAAVGSSLLQVTATSLDTGINAQMTYTISEDNALLNL-----ETFSMDPESGI-LRHQK 3270

Query: 206  ALNTSTIQ---LVVVATDTGNPPRQASV 230
             L+  T++   L V+ATD G PP  AS 
Sbjct: 3271 PLDYETVREYSLTVLATDGGEPPLTASA 3298



 Score = 44.7 bits (104), Expect = 0.081,   Method: Compositional matrix adjust.
 Identities = 45/141 (31%), Positives = 72/141 (51%), Gaps = 13/141 (9%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGERFSIS-RQGDISL 99
           QF K  Y+V+  EN+ VN  +++V     ++  + RV Y + +D  + F+IS   G I +
Sbjct: 795 QFQKMIYNVTIPENIDVNRTIVSVKAYDDDEGTNARVMYSILSDTKD-FTISPDSGVIKV 853

Query: 100 MQCLDYETEDSYRFTVYATDTL----MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIP 155
            Q LD ET   Y   V A+D      ++++  V+IS+ ++ND  P+F    Y + +    
Sbjct: 854 NQQLDRETIPWYELQVVASDGALEKPLSSTVLVSISLADINDNPPQFFPESYSIRIRE-- 911

Query: 156 LADLTPGSVIGKVEAADGDKG 176
             DL  G VI  + A D D G
Sbjct: 912 --DLPVGVVILTLTANDLDLG 930



 Score = 40.4 bits (93), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 40/135 (29%), Positives = 66/135 (48%), Gaps = 12/135 (8%)

Query: 74   DLRVKYWLSNDYG-ERFSISRQGDISLMQCLDYETEDSYRFTVYATD---TLMTTSATVN 129
            D ++ Y ++   G  RF+I   G I     LD E++  Y   V A D     + ++  V 
Sbjct: 1045 DSQIVYTITGGSGMRRFTIDNSGVIRTHGILDRESQAHYWLRVVACDRGTVPLCSTVEVL 1104

Query: 130  ISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGD--KGDRVTLSL-RGP 186
            + V ++ND  P+  +P YE  +P    A    G  +  +EA D D  K +++T S+  G 
Sbjct: 1105 VEVEDLNDNVPQTEFPVYEPMVPENSDA----GHSVVNLEARDADDSKNNQLTYSIVSGD 1160

Query: 187  YEKMFSIND-SGHIS 200
             +  FSI++ SG I+
Sbjct: 1161 PQGFFSIDEKSGLIT 1175



 Score = 39.3 bits (90), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 54/212 (25%), Positives = 93/212 (43%), Gaps = 19/212 (8%)

Query: 27   ALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLS- 82
            A ATL ++    + +   F ++ Y ++  EN  V   +L V+    +      + Y +  
Sbjct: 3296 ASATLNINVTDCNDQAPIFDQSVYRLTIPENTRVGQSILKVSATDLDSAAYAVISYAIGS 3355

Query: 83   -NDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDW 138
             +D G+    +  G IS+ Q LD E+   Y   + ATD   T++T +AT+ I++ +VND 
Sbjct: 3356 GDDLGQFEVNAPDGVISVAQPLDRESLSHYSLVILATDTGATVLTGTATLFINLTDVNDC 3415

Query: 139  DPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGD----KGDRVTLSLRGPYEKMFSIN 194
             PRF    +   +      DL   + I +++  D D    +G      + G  +  F I 
Sbjct: 3416 PPRFTMDNFTAVVQE----DLPLATSILQMKVTDDDLDPNRGPFTFDIVDGNQDNSFRI- 3470

Query: 195  DSGH--ISIVDLSALNTSTIQLVVVATDTGNP 224
            D  H  I+    +     T  L + A D G+P
Sbjct: 3471 DGNHWLITAAQFNRQIQDTFNLTIRAFDHGSP 3502


>gi|410948361|ref|XP_003980909.1| PREDICTED: protocadherin gamma-C4 [Felis catus]
          Length = 851

 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 63/230 (27%), Positives = 102/230 (44%), Gaps = 22/230 (9%)

Query: 13  LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKP 72
           LV+ A+   N  R   A L VS    +     F ++ Y +S LE+ P   +L+ +  + P
Sbjct: 210 LVLTAVDGGNPPRSGTAELRVSVLDVNDNAPAFQQSSYRISVLESAPAGMLLIQLNASDP 269

Query: 73  RDL----RVKYWLSNDYGER----FSI-SRQGDISLMQCLDYETEDSYRFTVYATD---T 120
            DL     V +  S    +R    FS+    G ++L   LD+E+E+ Y F + A D    
Sbjct: 270 -DLGPSGNVTFSFSGHTPDRVRNLFSLHPTTGKLTLQGPLDFESENYYEFDIRARDGGSP 328

Query: 121 LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVT 180
            M    ++ + +++VND  P          LP        PG+V+  +   D D G    
Sbjct: 329 AMEQHCSLRVDLLDVNDNAPHITVTSELGTLPE----SAEPGTVVALISVQDPDSGSNGD 384

Query: 181 LSLRGPYEKMFSINDS--GHISIVDLSALN---TSTIQLVVVATDTGNPP 225
           +SLR P    F++  +     S+V    L+    S+  ++V A+D GNPP
Sbjct: 385 VSLRIPDHLPFALKSAFRNQFSLVTSGPLDREAKSSYDIMVTASDAGNPP 434



 Score = 46.6 bits (109), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 44/169 (26%), Positives = 78/169 (46%), Gaps = 27/169 (15%)

Query: 77  VKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVV 133
           + + L + +  +FS+   G       LD E + SY   V A+D     ++T  ++ +++ 
Sbjct: 393 LPFALKSAFRNQFSLVTSGP------LDREAKSSYDIMVTASDAGNPPLSTQRSIFLNIS 446

Query: 134 NVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMF 191
           +VND  P F    +E+F+P     +  PG ++  + A+D D G    ++ SL  P  +  
Sbjct: 447 DVNDNPPSFFQRSHEVFVPE----NNRPGDLLCSLAASDPDSGLNALISYSLLEPRNR-- 500

Query: 192 SINDSGHISIVDLSAL----------NTSTIQLVVVATDTGNPPRQASV 230
            ++ S  IS+   +             T T+Q  V A D GNPP  ++V
Sbjct: 501 DVSASSFISLNPQTGAVHATRSFDYEQTQTLQFEVQARDRGNPPLSSTV 549



 Score = 43.9 bits (102), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 49/190 (25%), Positives = 83/190 (43%), Gaps = 15/190 (7%)

Query: 95  GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYEL-- 149
           G +   +  DYE   + +F V A D     ++++ TV + V+++ND  P    P+     
Sbjct: 515 GAVHATRSFDYEQTQTLQFEVQARDRGNPPLSSTVTVRLFVLDLNDNAPAVLRPRARPGS 574

Query: 150 FLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIND-SGHISIVDLS 205
             P      +  G ++ KV A D D G    +S   L  P   +F+++  +G +      
Sbjct: 575 LCPQALPPSVGAGHLVTKVTAVDLDSGYNAWVSYQLLEAPDPSLFAVSRYAGEVRTAVPI 634

Query: 206 ALNTSTIQLVVVATDTGNPPRQASVPAIMHFPE---AIVQ--QASSKLNSGTSSTVLIIL 260
             +    +LV+V  D+G+PP   SV  ++   E    +V   + SS    G S   L  L
Sbjct: 635 PADLPPQKLVIVVKDSGSPPLSTSVTLLVSLEEDTHPVVPDLRESSAPREGESRLTL-YL 693

Query: 261 GVVLIVLGFV 270
            V L+ + FV
Sbjct: 694 AVSLVAICFV 703


>gi|397513169|ref|XP_003826895.1| PREDICTED: protocadherin-7 isoform 2 [Pan paniscus]
          Length = 1194

 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 62/203 (30%), Positives = 92/203 (45%), Gaps = 21/203 (10%)

Query: 37  GTSLRELQFSKNEYSVSALENLPVNYV--LLTVTTNKPRDLRVKYWLSNDYGERFSIS-R 93
           G S+ E+ F +N        N+P   V  +L    +  ++  + Y L +     F+I   
Sbjct: 475 GQSVVEVYFPEN--------NIPGERVATVLATDADSGKNAEIAYSLDSSVMGIFAIDPD 526

Query: 94  QGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELF 150
            GDI +   LD E  D Y F V A D    ++  S TV + V + ND DP+F    +  +
Sbjct: 527 SGDILVNTVLDREQTDRYEFKVNAKDKGIPVLQGSTTVIVQVADKNDNDPKFMQDVFTFY 586

Query: 151 LPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSI-NDSGHI-SIVDLSAL 207
           +      +L P S +G V   D DKG    +SL       +FSI ND+G I S +     
Sbjct: 587 VKE----NLQPNSPVGMVTVMDADKGRNAEMSLYIEENNNIFSIENDTGTIYSTMSFDRE 642

Query: 208 NTSTIQLVVVATDTGNPPRQASV 230
           + +T    V A D G+PPR A+ 
Sbjct: 643 HQTTYTFRVKAVDGGDPPRSATA 665



 Score = 44.7 bits (104), Expect = 0.078,   Method: Compositional matrix adjust.
 Identities = 77/316 (24%), Positives = 136/316 (43%), Gaps = 46/316 (14%)

Query: 30  TLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVT---TNKPRDLRVKYWLSNDYG 86
           T+IV  A  +  + +F ++ ++    ENL  N  +  VT    +K R+  +  ++  +  
Sbjct: 563 TVIVQVADKNDNDPKFMQDVFTFYVKENLQPNSPVGMVTVMDADKGRNAEMSLYIEEN-N 621

Query: 87  ERFSISRQ-GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRF 142
             FSI    G I      D E + +Y F V A D      + +ATV++ V++ ND  P  
Sbjct: 622 NIFSIENDTGTIYSTMSFDREHQTTYTFRVKAVDGGDPPRSATATVSLFVMDENDNAPTV 681

Query: 143 RYPQ---YELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-D 195
             P+   Y L  P   +      +V+  V A D D G    L+   + G   K+F I+  
Sbjct: 682 TLPKNISYTLLPPSSNVR-----TVVATVLATDSDDGINADLNYSIVGGNPFKLFEIDPT 736

Query: 196 SGHISIV-DLSALNTSTIQLVVVATDTGNPPRQASVPAIMHFPEA------IVQQASSKL 248
           SG +S+V  L+  +    +LVV   D+G P +  +    +   E+      I  Q +  L
Sbjct: 737 SGVVSLVGKLTQKHYGLHRLVVQVNDSGQPSQSTTTLVHVFVNESVSNATVIDSQIARSL 796

Query: 249 NSGTSSTVL-------------IILGVVLIVLGFVIILLILYIHKNKHTKN-NGPPGSSH 294
           ++  +  +              I++GVV  ++  ++I+LI+ + +   +KN NG      
Sbjct: 797 HTPLTQDIAGDPSYEISKQRLSIVIGVVAGIMTVILIILIVVMARYCRSKNKNGYEAGKK 856

Query: 295 SKNDSFLSNVILPEKH 310
              D F      P++H
Sbjct: 857 DHEDFF-----TPQQH 867



 Score = 43.1 bits (100), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 41/150 (27%), Positives = 69/150 (46%), Gaps = 26/150 (17%)

Query: 93  RQGDISLMQCLDYETEDSYRFTVY---ATDTLMTTSATVNISVVNVNDWDPRFRYPQYEL 149
           +Q  + +   LD E  DSY  T+      D   ++ A + + + +VND  PRF    YE 
Sbjct: 195 KQPQLIVKGALDREQRDSYELTLRVRDGGDPPRSSQAILRVLITDVNDNSPRFEKSVYEA 254

Query: 150 FLPHIPLADLTPGSVIGKVEAADGDKG---------DRVTLSLRGPYEKMFSIND-SGHI 199
            L      +  PG+ I ++ AAD D G            T S+R    ++  +++ SG +
Sbjct: 255 DLAE----NSAPGTPILQLRAADLDVGVNGQIEYVFGAATESVR----RLLRLDETSGWL 306

Query: 200 SI---VDLSALNTSTIQLVVVATDTGNPPR 226
           S+   +D   +N   ++  V+A D G PP+
Sbjct: 307 SVLHRIDREEVN--QLRFTVMARDRGQPPK 334


>gi|391338304|ref|XP_003743499.1| PREDICTED: LOW QUALITY PROTEIN: cadherin-related tumor
            suppressor-like [Metaseiulus occidentalis]
          Length = 4957

 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 59/200 (29%), Positives = 88/200 (44%), Gaps = 19/200 (9%)

Query: 50   YSVSALENLPVNYVLLTVTTNK----PRDLRVKYWLSNDYGERFSISRQGDISLMQCLDY 105
            Y+    E+ P+N  +L+V  +     P        L  D  ++F IS  G I   + LD 
Sbjct: 1954 YTAEVREDAPLNTTVLSVHASDLDSGPNGEISYTILEGDDDQQFRISENGRIITTRALDR 2013

Query: 106  ETEDSYRFTVYATDTL------MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADL 159
            ET   Y   V A D        +++ A V+I + +VND  P F  P     + + PL   
Sbjct: 2014 ETRSHYNLIVSAEDRAANPRQRLSSIAQVSIVIQDVNDITPHFVSPNTSSIVENAPL--- 2070

Query: 160  TPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDSGHISIV--DLSALNTSTIQLV 215
               ++I  V+A DGD+G    +  S     E +FSI     +  V  +L     S  Q++
Sbjct: 2071 --NTIIMAVKAVDGDEGRNSHIEYSFASRSESLFSIGPVDGLLRVNSELDRELKSEYQII 2128

Query: 216  VVATDTGNPPRQASVPAIMH 235
            VVA D G PP  A+   I+H
Sbjct: 2129 VVAKDRGKPPLSATTTIIVH 2148



 Score = 55.1 bits (131), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 52/189 (27%), Positives = 87/189 (46%), Gaps = 17/189 (8%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRD-LRVKYWLSNDYGERFSISRQ-GDISLMQC 102
            FS   Y +S  EN PV   LLT+  + P + +  +   S +    F+I +  G ++L + 
Sbjct: 3101 FSSASYQISVAENEPVGNELLTIQASDPDEGVNGQLAFSIEANGNFAIDKHSGIVTLNES 3160

Query: 103  LDYETEDSYRFTVYATDTLMTTSATV---NISVVNVNDWDPRFRYPQYELFLPHIPLADL 159
            LD+ET   Y   V   D    + +      + V +VND  PRF   ++  ++      D 
Sbjct: 3161 LDFETAQGYSLKVAVRDLAFNSFSAFVTLTVVVTDVNDCAPRFSANEFHAYIHENEPVD- 3219

Query: 160  TPGSVIGKVEAADGD--KGDRVTLSLRGPYEKMFSINDSGHI----SIVDLSALNTSTIQ 213
               + I K+EA D D  +   +  SL GP  ++F+I+D   +    +I D      +  +
Sbjct: 3220 ---TEISKLEATDEDSPRNRIIRYSLLGPQSRLFAIDDVSGVLVSKAIFDFE--QQAAFE 3274

Query: 214  LVVVATDTG 222
            L VVA++ G
Sbjct: 3275 LEVVASNPG 3283



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 47/160 (29%), Positives = 73/160 (45%), Gaps = 20/160 (12%)

Query: 79   YWLSNDYGERFSISR-QGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVND 137
            Y L+ + G +F+I    G++++   LD E +D Y   V   D        + I+V +VND
Sbjct: 2821 YSLNENPGGKFAIDPVSGNVTVAGSLDRELKDEYNLKVTVFDGAWKKDTPLTITVTDVND 2880

Query: 138  WDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDK---GDRVTLSLRGPYEKMFSIN 194
              P+F   +Y  +L    +      S +G ++A D DK     R++  L+ P E     +
Sbjct: 2881 NSPQFGKTEYTFYLAEKQVIQ----SYVGLIQAIDRDKEGRNSRISYFLKRPSESFHVDS 2936

Query: 195  DSGHI----------SIVDLSALNTSTIQLVVVATDTGNP 224
             SG+I          S   LS  N  T+Q  +VATD G P
Sbjct: 2937 MSGNITTKRTFTYRKSRRGLSPENIHTLQ--IVATDYGKP 2974



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 64/258 (24%), Positives = 109/258 (42%), Gaps = 31/258 (12%)

Query: 25  RYALATLIVSKAGTSLRELQFSKNEYSVSALENLPV-NYVLLTVTTNKPRDLRVKYWLSN 83
           R  +  LI+     +  E QF K+EYSV   E + V +YV+    T++   +    +   
Sbjct: 441 RSTIKFLIIRVNDVNDHEPQFEKSEYSVVLSETVNVGSYVVAVSATDEDTGVNALVFYGI 500

Query: 84  DYG---ERFSISRQ-GDISLMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVN 136
           + G     F+I ++ G ++ ++ L+ E +D     +YA D          T+ I + + N
Sbjct: 501 ESGNDRHWFAIDKKTGLVTTVEILNREEQDLVELKIYAHDGGPNRKFAYTTLKIHIQDEN 560

Query: 137 DWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTL------SLRGPYEKM 190
           D  P F      + L      + TP +++ ++ A D D G   T+      S++  Y  M
Sbjct: 561 DEAPAFVMNHLNVTLSE----NATPHALVTQITATDNDLGPNGTVSYALQSSVKLQYGDM 616

Query: 191 FSIND-SGHISI-VDLSALNTSTIQLVVVATDTGNPPRQASVPAIMH-----------FP 237
           F I+  SG I+  + L     +  QL V+A D G P   ++V   +H           +P
Sbjct: 617 FEIDPLSGRITTAMALDRERCAFYQLTVIAKDNGQPSLSSTVNVSVHVADVNDNRPILYP 676

Query: 238 EAIVQQASSKLNSGTSST 255
                Q  S +  G  ST
Sbjct: 677 SIYFHQVRSGIKPGAFST 694



 Score = 47.4 bits (111), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 55/197 (27%), Positives = 92/197 (46%), Gaps = 20/197 (10%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKP---RDLRVKYWLSNDYG-ERFSISRQ-GDISL 99
            FS + +S    E+ P  + + +V        ++ +V Y + +D+G + FS++ Q G  +L
Sbjct: 1844 FSHSMFSFDIPEDTPRGHKIGSVRATDADIGQNGQVSYSVLSDWGNDLFSLNPQTGVFTL 1903

Query: 100  MQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
               LDYE    Y F V A D     ++++ TV ++V++ ND  P F    Y   +     
Sbjct: 1904 TSNLDYEQYQHYIFVVSAQDAGVPSLSSTVTVYMNVIDFNDNSPVFDPLSYTAEVRE--- 1960

Query: 157  ADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSINDSGHISIVDLSALNTST-- 211
             D    + +  V A+D D G    +S   L G  ++ F I+++G   I+   AL+  T  
Sbjct: 1961 -DAPLNTTVLSVHASDLDSGPNGEISYTILEGDDDQQFRISENGR--IITTRALDRETRS 2017

Query: 212  -IQLVVVATDTGNPPRQ 227
               L+V A D    PRQ
Sbjct: 2018 HYNLIVSAEDRAANPRQ 2034



 Score = 46.6 bits (109), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 53/190 (27%), Positives = 84/190 (44%), Gaps = 22/190 (11%)

Query: 31   LIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWL------SND 84
            +I++ AG S  +++F K++YS S  EN P    +L+V      D  ++Y++      S+ 
Sbjct: 1619 VIITSAGES-SDIRFEKSQYSGSIGENEPAGTSVLSVRAVGRADSELEYYVTAVSAGSSP 1677

Query: 85   YGERFSIS-RQGDISLMQCLDYETE-DSYRFTVYATD----TLMTTSATVNISVVNVNDW 138
             G +F +  + G I     LD E + + Y   +YATD    T MT      I V + ND 
Sbjct: 1678 QGRKFVVDIKTGVIETATPLDRELQPEPYEVIIYATDRNARTPMTAKTKAIIRVSDRNDT 1737

Query: 139  DPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGD-----KGDRVTLSLRGPYEKMFSI 193
             PRF    Y + +      D    + I  V A D D     K + V+   R  ++     
Sbjct: 1738 PPRFTGVPYAIRISE----DAATSTTILTVHAEDPDLQGSVKYELVSSKDRSAFQGFQID 1793

Query: 194  NDSGHISIVD 203
               GHI +V+
Sbjct: 1794 TMRGHIVLVE 1803



 Score = 45.8 bits (107), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 41/119 (34%), Positives = 59/119 (49%), Gaps = 10/119 (8%)

Query: 122  MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTP-GSVIGKVEAADGDKGD--R 178
            ++ S  + I + +VND  P F +  YE     I LA+LTP       + AAD D G+  +
Sbjct: 973  LSASQLLFIEIEDVNDHTPFFDHTSYE-----ISLAELTPVNERFFSLYAADDDVGENGQ 1027

Query: 179  VTLSLRGPYEKM-FSINDSGHISIVD-LSALNTSTIQLVVVATDTGNPPRQASVPAIMH 235
            VT S+ G  E+  F I   G + + + L   +     LVV A D G  PR +SVP  +H
Sbjct: 1028 VTYSITGGNEEQKFGIFPDGQMFVKEALDHEHHDFYVLVVTARDNGARPRSSSVPLTIH 1086



 Score = 42.0 bits (97), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 48/192 (25%), Positives = 84/192 (43%), Gaps = 12/192 (6%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNK----PRDLRVKYWLSNDYGERFSISRQ-GDISL 99
            F + +Y     EN PV   ++ V+       P  L     ++ D    FSI  + G I +
Sbjct: 2159 FEQRQYEAVMSENSPVEKSVIKVSATDFDVGPSGLIRYSIVAGDPNHDFSIDEETGVIRV 2218

Query: 100  MQCLDYETEDSYRFTVYATDTLMTT---SATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
             + +DYE ++ Y  TV A D+       +  ++I++ +VND  P F    YE  +    +
Sbjct: 2219 HKQVDYERKNRYVITVQAEDSSTEARHDTCMISITLKDVNDNPPTFLDNPYEASIVENAI 2278

Query: 157  ADLTPGSVIGKVEA--ADGDKGDRVTLSLRGPYEKMFSINDS-GHI-SIVDLSALNTSTI 212
                 G +I +++A   D D    +   L    + +F +N S G++ ++  L     S  
Sbjct: 2279 IPSGGGLLITQMQAVDVDADSNRNIYYRLLDGDKALFRVNSSNGNVYAMRSLDREQQSEY 2338

Query: 213  QLVVVATDTGNP 224
               V+A D+G P
Sbjct: 2339 TATVLAIDSGTP 2350



 Score = 40.0 bits (92), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 39/145 (26%), Positives = 62/145 (42%), Gaps = 10/145 (6%)

Query: 45   FSKNEYSVSALENLPVN---YVLLTVTTNKPRDLRVKYWLSNDYGE-RFSISRQGDISLM 100
            F    Y +S  E  PVN   + L     +   + +V Y ++    E +F I   G + + 
Sbjct: 993  FDHTSYEISLAELTPVNERFFSLYAADDDVGENGQVTYSITGGNEEQKFGIFPDGQMFVK 1052

Query: 101  QCLDYETEDSYRFTVYATDTLM---TTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLA 157
            + LD+E  D Y   V A D      ++S  + I +++ ND  PRF  P   L    +   
Sbjct: 1053 EALDHEHHDFYVLVVTARDNGARPRSSSVPLTIHIIDDNDNVPRF-VPNGNLVFSIV--E 1109

Query: 158  DLTPGSVIGKVEAADGDKGDRVTLS 182
            +  P S +G + A D D G    L+
Sbjct: 1110 NQEPDSFVGILVAEDADSGRNAELT 1134


>gi|119613267|gb|EAW92861.1| BH-protocadherin (brain-heart), isoform CRA_a [Homo sapiens]
          Length = 1200

 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 62/203 (30%), Positives = 92/203 (45%), Gaps = 21/203 (10%)

Query: 37  GTSLRELQFSKNEYSVSALENLPVNYV--LLTVTTNKPRDLRVKYWLSNDYGERFSIS-R 93
           G S+ E+ F +N        N+P   V  +L    +  ++  + Y L +     F+I   
Sbjct: 489 GQSVVEVYFPEN--------NIPGERVATVLATDADSGKNAEIAYSLDSSVMGIFAIDPD 540

Query: 94  QGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELF 150
            GDI +   LD E  D Y F V A D    ++  S TV + V + ND DP+F    +  +
Sbjct: 541 SGDILVNTVLDREQTDRYEFKVNAKDKGIPVLQGSTTVIVQVADKNDNDPKFMQDVFTFY 600

Query: 151 LPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSI-NDSGHI-SIVDLSAL 207
           +      +L P S +G V   D DKG    +SL       +FSI ND+G I S +     
Sbjct: 601 VKE----NLQPNSPVGMVTVMDADKGRNAEMSLYIEENNNIFSIENDTGTIYSTMSFDRE 656

Query: 208 NTSTIQLVVVATDTGNPPRQASV 230
           + +T    V A D G+PPR A+ 
Sbjct: 657 HQTTYTFRVKAVDGGDPPRSATA 679



 Score = 45.4 bits (106), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 78/318 (24%), Positives = 135/318 (42%), Gaps = 50/318 (15%)

Query: 30  TLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVT---TNKPRDLRVKYWLSNDYG 86
           T+IV  A  +  + +F ++ ++    ENL  N  +  VT    +K R+  +  ++  +  
Sbjct: 577 TVIVQVADKNDNDPKFMQDVFTFYVKENLQPNSPVGMVTVMDADKGRNAEMSLYIEEN-N 635

Query: 87  ERFSISRQ-GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRF 142
             FSI    G I      D E + +Y F V A D      + +ATV++ V++ ND  P  
Sbjct: 636 NIFSIENDTGTIYSTMSFDREHQTTYTFRVKAVDGGDPPRSATATVSLFVMDENDNAPTV 695

Query: 143 RYPQ---YELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-D 195
             P+   Y L  P   +      +V+  V A D D G    L+   + G   K+F I+  
Sbjct: 696 TLPKNISYTLLPPSSNVR-----TVVATVLATDSDDGINADLNYSIVGGNPFKLFEIDPT 750

Query: 196 SGHISIV-DLSALNTSTIQLVVVATDTGNPPR--------------------QASVPAIM 234
           SG +S+V  L+  +    +LVV   D+G P +                     + +   +
Sbjct: 751 SGVVSLVGKLTQKHYGLHRLVVQVNDSGQPSQSTTTLVHVFVNESVSNATAIDSQIARSL 810

Query: 235 HFPEAIVQQASSKLNSGTSSTVL-IILGVVLIVLGFVIILLILYIHKNKHTKN-NGPPGS 292
           H P  + Q  +   +   S   L I++GVV  ++  ++I+LI+ + +   +KN NG    
Sbjct: 811 HIP--LTQDIAGDPSYEISKQRLSIVIGVVAGIMTVILIILIVVMARYCRSKNKNGYEAG 868

Query: 293 SHSKNDSFLSNVILPEKH 310
                D F      P++H
Sbjct: 869 KKDHEDFF-----TPQQH 881


>gi|2979422|dbj|BAA25196.1| PCDH7 (BH-Pcdh)c [Homo sapiens]
          Length = 1200

 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 62/203 (30%), Positives = 92/203 (45%), Gaps = 21/203 (10%)

Query: 37  GTSLRELQFSKNEYSVSALENLPVNYV--LLTVTTNKPRDLRVKYWLSNDYGERFSIS-R 93
           G S+ E+ F +N        N+P   V  +L    +  ++  + Y L +     F+I   
Sbjct: 489 GQSVVEVYFPEN--------NIPGERVATVLATDADSGKNAEIAYSLDSSVMGIFAIDPD 540

Query: 94  QGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELF 150
            GDI +   LD E  D Y F V A D    ++  S TV + V + ND DP+F    +  +
Sbjct: 541 SGDILVNTVLDREQTDRYEFKVNAKDKGIPVLQGSTTVIVQVADKNDNDPKFMQDVFTFY 600

Query: 151 LPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSI-NDSGHI-SIVDLSAL 207
           +      +L P S +G V   D DKG    +SL       +FSI ND+G I S +     
Sbjct: 601 VKE----NLQPNSPVGMVTVMDADKGRNAEMSLYIEENNNIFSIENDTGTIYSTMSFDRE 656

Query: 208 NTSTIQLVVVATDTGNPPRQASV 230
           + +T    V A D G+PPR A+ 
Sbjct: 657 HQTTYTFRVKAVDGGDPPRSATA 679



 Score = 45.4 bits (106), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 81/318 (25%), Positives = 138/318 (43%), Gaps = 50/318 (15%)

Query: 30  TLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVT---TNKPRDLRVKYWLSNDYG 86
           T+IV  A  +  + +F ++ ++    ENL  N  +  VT    +K R+  +  ++  +  
Sbjct: 577 TVIVQVADKNDNDPKFMQDVFTFYVKENLQPNSPVGMVTVMDADKGRNAEMSLYIEEN-N 635

Query: 87  ERFSISRQ-GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRF 142
             FSI    G I      D E + +Y F V A D      + +ATV++ V++ ND  P  
Sbjct: 636 NIFSIENDTGTIYSTMSFDREHQTTYTFRVKAVDGGDPPRSATATVSLFVMDENDNAPTV 695

Query: 143 RYPQ---YELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-D 195
             P+   Y L  P   +      +V+  V A D D G    L+   + G   K+F I+  
Sbjct: 696 TLPKNISYTLLPPSSNVR-----TVVATVLATDSDDGINADLNYSIVGGNPFKLFEIDPT 750

Query: 196 SGHISIV-DLSALNTSTIQLVVVATDTGNPPRQASVPAIMHF--------PEAIVQQASS 246
           SG +S+V  L+  +    +LVV   D+G P +  S   ++H           AI  Q + 
Sbjct: 751 SGVVSLVGKLTQKHYGLHRLVVQVNDSGQPSQ--STTTVVHVFVNESVSNATAIDSQIAR 808

Query: 247 KLN-------SGTSSTVL------IILGVVLIVLGFVIILLILYIHKNKHTKN-NGPPGS 292
            L+       +G  S  +      I++GVV  ++  ++I+LI+ + +   +KN NG    
Sbjct: 809 SLHIPLTQDIAGDPSYEISKQRLSIVIGVVAGIMTVILIILIVVMARYCRSKNKNGYEAG 868

Query: 293 SHSKNDSFLSNVILPEKH 310
                D F      P++H
Sbjct: 869 KKDHEDFF-----TPQQH 881


>gi|449490371|ref|XP_002196098.2| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 2
           [Taeniopygia guttata]
          Length = 2548

 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 72/232 (31%), Positives = 102/232 (43%), Gaps = 30/232 (12%)

Query: 15  VRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTT---NK 71
           V A+ +    R A+ATL V+ + T+  +  F + EY  S  ENL V Y +LTV     + 
Sbjct: 512 VIAVDHGTPRRSAMATLTVTVSDTNDHDPAFEQLEYRESVRENLEVGYEVLTVRATDGDA 571

Query: 72  PRDLRVKYWLSN--DYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDTLM-----T 123
             +  + Y L N  D  E F I SR G I     +D E  D++   V ATD        +
Sbjct: 572 GPNANILYRLLNAGDANEVFEIDSRSGVIRTRGPVDREVVDTFELLVEATDQGQDPGPRS 631

Query: 124 TSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSL 183
            +ATV I+V + ND  P+F   +Y   +P     D+ P   + +V A D DKG    +  
Sbjct: 632 ATATVRIAVEDDNDNAPQFSERRYVAQVPE----DVVPNVAVLQVMATDRDKGSNALV-- 685

Query: 184 RGPYEKMFSINDSGHISI-VDLSALN---------TSTIQLVVVATDTGNPP 225
              +  + S N  GH  I     AL+         T    L + A D G PP
Sbjct: 686 ---HYSIVSGNTRGHFYIDAQTGALDVVTPLDYEVTKEFTLRIRAQDGGRPP 734



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 39/146 (26%), Positives = 74/146 (50%), Gaps = 9/146 (6%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWL-SNDYGERFSIS-RQGDISL 99
            F ++E+ +   EN P+  V+  +T   P +    ++ Y +   +  E F +    G+++ 
Sbjct: 1172 FERDEFDIFVEENSPIGLVVARITATDPDEGTNAQIMYQIVEGNIPEVFQLDIFSGELTA 1231

Query: 100  MQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYE-LFLPHIP-LA 157
            +  LDYET+  Y   V AT   + + AT+++ + + ND  P+ +   +E LF  +I   +
Sbjct: 1232 LADLDYETKAEYIMVVQATSAPLVSRATIHVRLCDTNDNSPQLK--NFEILFNNYITNRS 1289

Query: 158  DLTPGSVIGKVEAADGDKGDRVTLSL 183
               PG +IG++ A D D  D +T + 
Sbjct: 1290 SSFPGGIIGRIPAYDPDVSDHLTYAF 1315



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 59/211 (27%), Positives = 91/211 (43%), Gaps = 25/211 (11%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWLSNDYGER----FSISR-QG 95
           QF  + Y  +  EN P    +  VT   P +    R+ Y ++  +  R    F++    G
Sbjct: 433 QFQPSSYQATVEENQPARTPVTQVTAQDPDEGEAGRLHYSMAALFDSRSNDLFTVDPVTG 492

Query: 96  DISLMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLP 152
            IS    LD E++ ++ F V A D      +  AT+ ++V + ND DP F   +Y   + 
Sbjct: 493 AISTAAPLDRESKSTHVFRVIAVDHGTPRRSAMATLTVTVSDTNDHDPAFEQLEYRESV- 551

Query: 153 HIPLADLTPGSVIGKVEAADGDKGDRVTLSLR----GPYEKMFSIND-SGHISI---VDL 204
                +L  G  +  V A DGD G    +  R    G   ++F I+  SG I     VD 
Sbjct: 552 ---RENLEVGYEVLTVRATDGDAGPNANILYRLLNAGDANEVFEIDSRSGVIRTRGPVDR 608

Query: 205 SALNTSTIQLVVVATDTGNPPRQASVPAIMH 235
             ++  T +L+V ATD G  P   S  A + 
Sbjct: 609 EVVD--TFELLVEATDQGQDPGPRSATATVR 637



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 53/190 (27%), Positives = 89/190 (46%), Gaps = 14/190 (7%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLR--VKYWLSN-DYGERFSISRQ---GDI 97
            +F++ EYS    E+  V   +LTV+    RD    + Y +S+ +   RFSI+ Q   G I
Sbjct: 860  EFTQREYSARLNEDAAVGTSVLTVSAVD-RDAYSIITYQISSGNTRNRFSITSQSGGGLI 918

Query: 98   SLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLA 157
            SL   LDY+ E  Y  T+ A+D     +A V ++V + N   P F+   Y + +      
Sbjct: 919  SLALPLDYKLERQYLLTIAASDGTRHDTAQVVVNVTDANTHRPVFQSSHYTINVNE---- 974

Query: 158  DLTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSINDSGHISI-VDLSALNTSTIQL 214
            D   G+ +  + A D D G+  R+T  +     +     D+G ++  ++L   +  +  L
Sbjct: 975  DRPVGTTVVVISATDEDTGENARITYLMEDSIPQFSIAADTGAVTTQMELDYEDQVSYTL 1034

Query: 215  VVVATDTGNP 224
             + A D G P
Sbjct: 1035 AITARDNGIP 1044



 Score = 42.4 bits (98), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 46/170 (27%), Positives = 72/170 (42%), Gaps = 13/170 (7%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTT----NKPRDLRVKYWLSNDYGERFSISRQ-GDISL 99
           F    +  + LEN+PV Y ++ V      +      V   L    G  F+I+   G I +
Sbjct: 756 FVSTPFQATVLENVPVGYSVIHVQAIDADSGDNSWLVYTLLETGTGFPFTINNSTGWIVV 815

Query: 100 MQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
              LD E  D Y F V A D     M ++A+V++++++VND  P F   +Y   L     
Sbjct: 816 ASELDREVVDFYSFRVEAQDHGTPSMASTASVSVTILDVNDNSPEFTQREYSARLNE--- 872

Query: 157 ADLTPGSVIGKVEAADGDKGDRVTLSL-RGPYEKMFSINDSGHISIVDLS 205
            D   G+ +  V A D D    +T  +  G     FSI       ++ L+
Sbjct: 873 -DAAVGTSVLTVSAVDRDAYSIITYQISSGNTRNRFSITSQSGGGLISLA 921


>gi|109073956|ref|XP_001085604.1| PREDICTED: protocadherin-7 isoform 3 [Macaca mulatta]
          Length = 1201

 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 62/203 (30%), Positives = 92/203 (45%), Gaps = 21/203 (10%)

Query: 37  GTSLRELQFSKNEYSVSALENLPVNYV--LLTVTTNKPRDLRVKYWLSNDYGERFSIS-R 93
           G S+ E+ F +N        N+P   V  +L    +  ++  + Y L +     F+I   
Sbjct: 490 GQSVVEVYFPEN--------NIPGERVATVLATDADSGKNAEIAYSLDSSVMGIFAIDPD 541

Query: 94  QGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELF 150
            GDI +   LD E  D Y F V A D    ++  S TV + V + ND DP+F    +  +
Sbjct: 542 SGDILVNTVLDREQTDRYEFKVNAKDKGIPVLQGSTTVIVQVADKNDNDPKFMQDVFTFY 601

Query: 151 LPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSI-NDSGHI-SIVDLSAL 207
           +      +L P S +G V   D DKG    +SL       +FSI ND+G I S +     
Sbjct: 602 VKE----NLQPNSPVGMVTVMDADKGRNAEMSLYIEENNNIFSIENDTGTIYSTMSFDRE 657

Query: 208 NTSTIQLVVVATDTGNPPRQASV 230
           + +T    V A D G+PPR A+ 
Sbjct: 658 HQTTYTFRVKAVDGGDPPRSATA 680


>gi|347543901|gb|AEP02523.1| CDH23, partial [Aselliscus stoliczkanus]
          Length = 3138

 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 59/194 (30%), Positives = 84/194 (43%), Gaps = 18/194 (9%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDLR---VKYWLSNDYGERFSIS-RQGDISLM 100
            F +  Y  +  E++PV  V+L VT           ++Y L N  G +FSI+   GDI ++
Sbjct: 2392 FDQPSYQEAIFEDIPVGTVILRVTATDADSGNYAVIEYGLGNGEG-KFSINPTTGDIYVL 2450

Query: 101  QCLDYETEDSYRFTVYATD-------TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
              LD E +D Y  T  A D            S  V I V++VND  P F  PQY   +  
Sbjct: 2451 SPLDREKKDHYILTAIARDNPGDIASNRRENSVQVVIQVLDVNDCRPEFSKPQYSTSV-- 2508

Query: 154  IPLADLTPGSVIGKVEAADGDKGDRVTL--SLRGPYEKMFSINDSGHISIVDLSALNTST 211
                +   G+ +  + A D D+G    L  SL GP  + F ++    +        +   
Sbjct: 2509 --YENEPAGTSVITMMATDQDEGSNAELAYSLEGPGMEAFHVDKDSGLVTTQRPLRSYER 2566

Query: 212  IQLVVVATDTGNPP 225
              L VVATD G PP
Sbjct: 2567 FNLTVVATDGGEPP 2580



 Score = 51.2 bits (121), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 62/210 (29%), Positives = 94/210 (44%), Gaps = 28/210 (13%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRDLR------VKYWLSNDYGERFSISRQGDIS 98
           F+K  Y VS +EN+     +L +        R      + Y L   +  R S SR G+I+
Sbjct: 661 FNKPAYFVSVVENIMAGATVLFLNATDLDGSREYGQESIIYSLEGSFQFRIS-SRSGEIT 719

Query: 99  LMQCLDYETEDSYRFTVYATD-----TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
               LD ET+  Y   V A D        T  ATVNI+++++ND  P ++   Y     +
Sbjct: 720 TSTLLDRETKAEYILIVRAVDGGVGHNQKTGIATVNITLLDINDNHPTWKDAPY-----Y 774

Query: 154 IPLADLT-PGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSIND-SGHIS----IVDLSA 206
           I L ++T P S +  V A D D G+  TL     P  K +S+N  +G I     ++D   
Sbjct: 775 INLVEMTPPDSDVTTVVAVDPDLGENGTLVYSIDPPNKFYSLNSTTGKIRTTHVMLDREN 834

Query: 207 LNTSTIQL----VVVATDTGNPPRQASVPA 232
            +    +L    +V   D G PP +A+  A
Sbjct: 835 PDPHEAELMRKIIVSVRDCGRPPLKATSSA 864



 Score = 51.2 bits (121), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 64/207 (30%), Positives = 95/207 (45%), Gaps = 22/207 (10%)

Query: 45  FSKNEYSVSALENLPVNYVLLTV--TTNKPRDL-RVKYWLSNDYGERFSISRQ-GDISLM 100
           FS+  Y+VS  EN+ V   +LTV  T N       V Y+ S D  +RFS+ +  G I L+
Sbjct: 450 FSQPLYNVSLYENVTVGTSVLTVLATDNDAGTFGEVNYYFS-DNADRFSLDKDTGLILLI 508

Query: 101 QCLDYETEDSYRFTVYATDTL-MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADL 159
             LDYE    +  TV A D     T+  V I+V++VND  P F+   Y        L + 
Sbjct: 509 AKLDYELIQRFTLTVIARDGGGEETTGRVRINVLDVNDNVPTFQKDAY-----MGALREN 563

Query: 160 TPG-SVIGKVEAADGDK--GDRVTLSL-----RGPYEKMFSINDSGHISI---VDLSALN 208
            P  + + ++ A D D    + +T S+      G Y  +        IS+   +D   + 
Sbjct: 564 EPSVTQLVRLRATDEDSPPNNLITYSIIFASSFGSYFDISVYEGYAVISVNHPLDYEQIP 623

Query: 209 TSTIQLVVVATDTGNPPRQASVPAIMH 235
              I L V+A D GNPP  ++VP  + 
Sbjct: 624 NGLIYLTVMAKDAGNPPLNSTVPVTIE 650



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 47/141 (33%), Positives = 66/141 (46%), Gaps = 15/141 (10%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDY---GERFSI-SRQGDISLM 100
           F    YSV   E+ PV   +  V    P DL     +   +    E F+I S +G ++++
Sbjct: 124 FHNQPYSVRIPEDTPVGTPIFIVNATDP-DLGAGGSVLYSFQPPSEFFAIDSARGIVTVI 182

Query: 101 QCLDYETEDSYRFTVYATDT----LMTTSATVNISVVNVNDWDPRF-RYPQYELFLPHIP 155
           Q LDYET  SY+ TV ATD      ++T A + I + +V D DP F   P       H P
Sbjct: 183 QELDYETTQSYQLTVNATDQDKTRPLSTLANLAIIITDVQDMDPIFINLPYSTNIYEHSP 242

Query: 156 LADLTPGSVIGKVEAADGDKG 176
                PG+ +  + A D DKG
Sbjct: 243 -----PGTTVRVITAIDQDKG 258



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 61/204 (29%), Positives = 98/204 (48%), Gaps = 25/204 (12%)

Query: 43   LQFSKNEYSVSALENLPVNYVLLTVTTNKPRDL-----RVKYWLSNDYGERFSI-SRQGD 96
            +QFS   Y V+ LENL +   ++ V    P ++     R   + S      F I S  G 
Sbjct: 1301 VQFSNASYEVAILENLALGTEIVRVQAYSPDNINPITYRFDAYTSAQAKALFKIDSFTGA 1360

Query: 97   ISLMQCLDYETEDSYRFTVYATD--TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHI 154
            I++   +D E  D +  TV A D  + + ++A V I+V++ ND  PRF  P  +  +  +
Sbjct: 1361 ITVKGLVDREKFDFHTLTVVADDGGSKVDSTAKVYITVLDENDNSPRFD-PTSDSMV-SV 1418

Query: 155  PLADLTPGSVIGKVEAADGDKGD--RVTLSLR-----GPYEKMFSINDS-GHISI---VD 203
            P  D   G  +  V+A D D G   +V  SL      G +E + + NDS G + +   +D
Sbjct: 1419 P-EDCPVGQRVVTVKAHDPDAGSNGQVVFSLASGNIAGAFE-IVTANDSIGEVFVATPLD 1476

Query: 204  LSALNTSTIQLVVVATDTGNPPRQ 227
               L+   ++  +VA+D G PPR+
Sbjct: 1477 REELDHYILK--IVASDCGTPPRK 1498



 Score = 47.8 bits (112), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 52/161 (32%), Positives = 75/161 (46%), Gaps = 33/161 (20%)

Query: 65   LTVTTNKPRDLRVKYWLS---NDYG---------------ERFSIS-RQGDISLMQCLDY 105
            ++V+ + PRD RV  WL+   ND G                +FS+  R   +  +  LD 
Sbjct: 992  VSVSEDVPRDFRV-VWLNCTDNDIGLNAELSYFITAGNVDGKFSVGYRDAVVRTVVGLDR 1050

Query: 106  ETEDSYRFTVYATDT-----LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLT 160
            ET  SY   + A D        T +ATV I+V++VND  P F    YE  +P     D+ 
Sbjct: 1051 ETTASYTLILEAIDNGPVGKRRTGTATVFITVLDVNDNRPIFLQSSYEASVPE----DIP 1106

Query: 161  PGSVIGKVEAADGDKGD--RVTLS-LRGPYEKMFSIN-DSG 197
             G  I ++ A D D+G+  RV    L+G +   F I+ DSG
Sbjct: 1107 EGHSIVQLTATDADEGEFGRVWYRILQGNFGNYFEIDVDSG 1147



 Score = 44.3 bits (103), Expect = 0.094,   Method: Compositional matrix adjust.
 Identities = 53/197 (26%), Positives = 88/197 (44%), Gaps = 24/197 (12%)

Query: 44  QFSKNEYSVSALENLPVNYVL----LTVTTNKPRDLRVKYWLSNDYGERF-----SISRQ 94
           +F+ +EYSV+  E   V + L      V  ++  +   + +L  +    F     S+  +
Sbjct: 339 EFNSSEYSVAITELAQVGFALPLFIQVVDKDEGLNSMFEVYLVGNNSHHFIISPTSVQGK 398

Query: 95  GDISLMQC--LDYETEDSYRFTVYATDTL--MTTSATVNISVVNVNDWDPRFRYPQYELF 150
            DI +     LDYET D Y F ++A +++      A V I+++N ND  P F  P Y + 
Sbjct: 399 ADIRIRVAIPLDYETVDRYDFDLFANESVPDHVGYAKVKITLINENDNRPIFSQPLYNVS 458

Query: 151 LPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDSGHISIVDLSALN 208
           L      ++T G+ +  V A D D G    V        ++     D+G I ++  + L+
Sbjct: 459 L----YENVTVGTSVLTVLATDNDAGTFGEVNYYFSDNADRFSLDKDTGLILLI--AKLD 512

Query: 209 TSTIQ---LVVVATDTG 222
              IQ   L V+A D G
Sbjct: 513 YELIQRFTLTVIARDGG 529



 Score = 42.4 bits (98), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 36/108 (33%), Positives = 49/108 (45%), Gaps = 10/108 (9%)

Query: 92   SRQGDISLMQCLDYETEDSYRFTVYATDTLMTTSAT---VNISVVNVNDWDPRFRYPQY- 147
            S  G +   + +DYE      FTV A D      A    V + +V++ND +P F  P Y 
Sbjct: 2339 SSAGKVIANRTVDYEEVHWLNFTVRAADNGSPPRAAEIPVYLEIVDINDNNPIFDQPSYQ 2398

Query: 148  ELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSIN 194
            E     IP+     G+VI +V A D D G+   +    G  E  FSIN
Sbjct: 2399 EAIFEDIPV-----GTVILRVTATDADSGNYAVIEYGLGNGEGKFSIN 2441



 Score = 41.6 bits (96), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 45/142 (31%), Positives = 67/142 (47%), Gaps = 20/142 (14%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVT-TNKPRDL--RVKYWLSNDYGERFSIS------RQG 95
            F     ++  LEN P    +L VT T++   L   + Y +     +RF I       R G
Sbjct: 2059 FDPAALTIHLLENCPPGLSILQVTATDEDSGLNGELIYRIEAGAQDRFHIHPVTGIIRVG 2118

Query: 96   DISLMQCLDYETEDSYRFTVYATDT-LMTTSATVNISVV--NVNDWDPRFRYPQYELFLP 152
            ++++    D E ++SYR TV ATD   +  S TV I+++  +VND  P F  P   + + 
Sbjct: 2119 NVTI----DREEQESYRLTVVATDRGTVPLSGTVIITILIDDVNDCRPEFINPIQTVSV- 2173

Query: 153  HIPLADLTPGSVIGKVEAADGD 174
               L    PG+VI  V A D D
Sbjct: 2174 ---LESAEPGTVIANVTAIDRD 2192



 Score = 39.3 bits (90), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 43/130 (33%), Positives = 57/130 (43%), Gaps = 9/130 (6%)

Query: 95  GDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHI 154
           G + L Q LD ET   +      +D     +  VNI V +VND  P F    Y + +P  
Sbjct: 77  GVVWLRQPLDRETVSEFIVEFSVSDHQGVITRKVNIQVGDVNDNAPTFHNQPYSVRIPE- 135

Query: 155 PLADLTPGSVIGKVEAADGD--KGDRVTLSLRGPYEKMFSINDSGHISIV--DLSALNTS 210
              D   G+ I  V A D D   G  V  S + P E  F+I+ +  I  V  +L    T 
Sbjct: 136 ---DTPVGTPIFIVNATDPDLGAGGSVLYSFQPPSE-FFAIDSARGIVTVIQELDYETTQ 191

Query: 211 TIQLVVVATD 220
           + QL V ATD
Sbjct: 192 SYQLTVNATD 201


>gi|390466328|ref|XP_002751246.2| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 2
           [Callithrix jacchus]
          Length = 2871

 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 70/219 (31%), Positives = 102/219 (46%), Gaps = 22/219 (10%)

Query: 25  RYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWL 81
           R ALATL +    T+  +  F + EY  S  ENL V Y +LTV     + P +  + Y L
Sbjct: 219 RSALATLTILVTDTNDHDPVFEQQEYKESLRENLEVGYEVLTVRATDGDAPPNANILYRL 278

Query: 82  SNDYG----ERFSIS-RQGDISLMQCLDYETEDSYRFTVYATDT-----LMTTSATVNIS 131
               G    E F I  R G I     +D E  +SY+ TV A+D        +T+A V +S
Sbjct: 279 LEGPGGSPSEVFEIDPRSGVIRTRGPVDREEVESYQLTVEASDQGRDPGPRSTTAAVFLS 338

Query: 132 VVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYE 188
           V + ND  P+F   +Y + +      D+TPG+ + +V A+D DKG    +    + G   
Sbjct: 339 VEDDNDNAPQFSEKRYVVQV----REDVTPGAPVLRVTASDRDKGSNALVHYSIMSGNAR 394

Query: 189 KMFSIN-DSGHISIVD-LSALNTSTIQLVVVATDTGNPP 225
             F ++  +G + +V  L    T    L V A D G PP
Sbjct: 395 GQFYLDAQTGALDVVSPLDYETTKEYTLRVRAQDGGRPP 433



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 50/171 (29%), Positives = 80/171 (46%), Gaps = 15/171 (8%)

Query: 45  FSKNEYSVSALENLPVNYVLL---TVTTNKPRDLRVKYWLSNDYGERFSIS---RQGDIS 98
           F    +  + LE++P+ Y++L    V  +   + R++Y L+   G  F  +     G IS
Sbjct: 455 FVSTPFQATVLESVPLGYLVLHVQAVDADAGDNARLEYRLAG-VGHDFPFTINNGTGWIS 513

Query: 99  LMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIP 155
           +   LD E  D Y F V A D     +T SA+V+++V++VND +P F  P+Y + L    
Sbjct: 514 VAAELDREEVDFYSFGVEARDHGTPALTASASVSVTVLDVNDNNPTFTQPEYTVRLNE-- 571

Query: 156 LADLTPGSVIGKVEAADGDKGDRVTLSL-RGPYEKMFSINDSGHISIVDLS 205
             D   G+ +  V A D D    +T  +  G     FSI       +V L+
Sbjct: 572 --DAAVGTSVVTVSAVDRDAHSVITYQITSGNTRNRFSITSQSGGGLVSLA 620



 Score = 44.7 bits (104), Expect = 0.074,   Method: Compositional matrix adjust.
 Identities = 40/149 (26%), Positives = 69/149 (46%), Gaps = 10/149 (6%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWL-SNDYGERFSIS-RQGDISL 99
            F ++E+ V   EN P+   +  VT   P +    ++ Y +   +  E F +    G+++ 
Sbjct: 871  FEQDEFDVFVEENSPIGLAVARVTATDPDEGTNAQIMYQIVEGNIPEVFQLDIFSGELTA 930

Query: 100  MQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPH--IPLA 157
            +  LDYE    Y   + AT   + + ATV++ +++ ND  P      +E+   +     +
Sbjct: 931  LVDLDYEDRPEYVLVIQATSAPLVSRATVHVRLLDRNDNPPVLG--NFEILFNNYVTNRS 988

Query: 158  DLTPGSVIGKVEAADGDKGDRVTLSL-RG 185
               PG  IG+V A D D  D +T S  RG
Sbjct: 989  SSFPGGAIGRVPAHDPDISDSLTYSFERG 1017



 Score = 44.7 bits (104), Expect = 0.075,   Method: Compositional matrix adjust.
 Identities = 50/189 (26%), Positives = 86/189 (45%), Gaps = 14/189 (7%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRDLR--VKYWL-SNDYGERFSISRQ---GDIS 98
           F++ EY+V   E+  V   ++TV+    RD    + Y + S +   RFSI+ Q   G +S
Sbjct: 560 FTQPEYTVRLNEDAAVGTSVVTVSAVD-RDAHSVITYQITSGNTRNRFSITSQSGGGLVS 618

Query: 99  LMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLAD 158
           L   LDY+ E  Y   V A+D     +A + ++V + N   P F+   Y + +      D
Sbjct: 619 LALPLDYKLERQYVLAVTASDGTRQDTAQIVVNVTDANTHRPVFQSSHYTVNVNE----D 674

Query: 159 LTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSINDSGHISI-VDLSALNTSTIQLV 215
              G+ +  + A D D G+  R+T  +     +     D+G ++   +L   +  +  L 
Sbjct: 675 RPAGTTVVLISATDEDTGENARITYFMEDSIPQFRIDADTGAVTTQAELDYEDQVSYTLA 734

Query: 216 VVATDTGNP 224
           + A D G P
Sbjct: 735 ITARDNGIP 743


>gi|340723065|ref|XP_003399918.1| PREDICTED: protocadherin-like wing polarity protein stan-like [Bombus
            terrestris]
          Length = 3163

 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 69/240 (28%), Positives = 110/240 (45%), Gaps = 18/240 (7%)

Query: 6    DFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLL 65
            D+ Q    V+     D+  R   A + V+ +  +  E  F    Y+VS  E+ P+   +L
Sbjct: 765  DYKQEKRFVLTVTASDSGGRTDTALVYVNVSDANNFEPVFENTPYAVSLFEDAPIGTTVL 824

Query: 66   TVT---TNKPRDLRVKYWLSNDYGE---RFSISRQ-GDISLMQCLDYETEDSYRFTVYAT 118
             V+   ++  ++ ++ Y L  D GE    F+I+ Q G I+  + LD E    Y  TV A 
Sbjct: 825  VVSATDSDVGKNAQITYSLGTDGGESASEFTINPQTGAITTTRTLDRELVPGYFLTVTAR 884

Query: 119  DTL---MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEA--ADG 173
            D     ++ +  V ISV +VND  P F  PQY+  +P     D+  G+ + +V A  AD 
Sbjct: 885  DGGVPPLSDTINVEISVTDVNDNAPVFEAPQYQGSIPE----DVAGGTSVLRVSATDADT 940

Query: 174  DKGDRVTLSLRGPYEKMFSINDSGHI--SIVDLSALNTSTIQLVVVATDTGNPPRQASVP 231
            D   RV  +L    +  F+I+ S  +  +   L   + +   L  VA D G+P     VP
Sbjct: 941  DLNGRVRYALDDDGDGAFAIDSSTGVIRTAKPLDRESVAMYTLKAVAMDRGSPSLSTVVP 1000



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 64/229 (27%), Positives = 102/229 (44%), Gaps = 23/229 (10%)

Query: 13  LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTT--- 69
           +V+RA    +  R     L+V     +    +F  + +  S  EN+P+ Y +L +     
Sbjct: 558 IVIRAQDGGSPARSNTTQLLVHVGDVNDNAPRFYTSHFQESVSENVPIGYSMLRIQAYDA 617

Query: 70  NKPRDLRVKYWL-SNDYG----ERFSIS---RQGDISLMQCLDYETEDSYRFTVYATDTL 121
           ++  + ++KY + + D+     E F I+     G I   + LD E    Y+FTV A D+ 
Sbjct: 618 DEGANAQIKYTIGARDFSGASTENFPITVNTETGWIYTTKQLDREQCSRYQFTVIAADSG 677

Query: 122 ---MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDR 178
               + SATV ++V +VND DP F    YE  +      D  PG+ +  V A D D+  R
Sbjct: 678 EVPKSASATVILTVTDVNDNDPYFDPKNYEAVVSE----DDPPGTPVTSVTATDPDEDAR 733

Query: 179 VTLSL-RGPYEKMFSI---NDSGHISIVD-LSALNTSTIQLVVVATDTG 222
           +   +  G     FSI   N  G I++   L         L V A+D+G
Sbjct: 734 IHYEITAGNTRGRFSIASQNGRGLITVAQPLDYKQEKRFVLTVTASDSG 782



 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 62/232 (26%), Positives = 105/232 (45%), Gaps = 27/232 (11%)

Query: 25  RYALATLIVSKAGTSLRELQFSKNEYSVSALENL-----PVNYVLLTVTTNKPRDLRVKY 79
           + A ATL+V     +    QF++  YS    E+L     PV   +     +   +  V+Y
Sbjct: 463 KSANATLVVRVLDDNDNYPQFTERTYSAWIPEDLDYTANPVIARIRATDADSGNNAAVRY 522

Query: 80  WL-SNDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVN 134
            +   +    FSI S  GD++L++ LDYE+  SY+  + A D      + +  + + V +
Sbjct: 523 AIIGGNTQNTFSIDSMIGDVALVKPLDYESTRSYKIVIRAQDGGSPARSNTTQLLVHVGD 582

Query: 135 VNDWDPRFRYPQY-ELFLPHIPLADLTPGSVIGKVEAADGDKGD----RVTLSLR---GP 186
           VND  PRF    + E    ++P+     G  + +++A D D+G     + T+  R   G 
Sbjct: 583 VNDNAPRFYTSHFQESVSENVPI-----GYSMLRIQAYDADEGANAQIKYTIGARDFSGA 637

Query: 187 YEKMFSI---NDSGHI-SIVDLSALNTSTIQLVVVATDTGNPPRQASVPAIM 234
             + F I    ++G I +   L     S  Q  V+A D+G  P+ AS   I+
Sbjct: 638 STENFPITVNTETGWIYTTKQLDREQCSRYQFTVIAADSGEVPKSASATVIL 689



 Score = 45.8 bits (107), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 58/236 (24%), Positives = 101/236 (42%), Gaps = 27/236 (11%)

Query: 25  RYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWL 81
           R    TL V+   T+     F   E   S  E +PV   ++TV     +  R+  V+Y +
Sbjct: 346 RTGTTTLQVNVLDTNDHAPTFEWPEDEASIREGVPVGSTVVTVKATDQDAGRNAEVEYSI 405

Query: 82  ----------SNDYGERFSIS-RQGDISLMQCLDYETEDSYRFTVYATD------TLMTT 124
                     + D    F I  R G ++    LD E  + Y   +  +D         + 
Sbjct: 406 LSTTSGSGVANADDALTFRIDPRTGVVTTRTPLDREKTEVYTVILSVSDQATPPSARKSA 465

Query: 125 SATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS-- 182
           +AT+ + V++ ND  P+F    Y  ++P     D T   VI ++ A D D G+   +   
Sbjct: 466 NATLVVRVLDDNDNYPQFTERTYSAWIPED--LDYTANPVIARIRATDADSGNNAAVRYA 523

Query: 183 -LRGPYEKMFSINDS-GHISIVD-LSALNTSTIQLVVVATDTGNPPRQASVPAIMH 235
            + G  +  FSI+   G +++V  L   +T + ++V+ A D G+P R  +   ++H
Sbjct: 524 IIGGNTQNTFSIDSMIGDVALVKPLDYESTRSYKIVIRAQDGGSPARSNTTQLLVH 579



 Score = 39.3 bits (90), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 43/140 (30%), Positives = 67/140 (47%), Gaps = 13/140 (9%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVT-TNKPRDL--RVKYWLSNDYGERFSI-SRQGDISLM 100
            F   +Y  S  E++     +L V+ T+   DL  RV+Y L +D    F+I S  G I   
Sbjct: 911  FEAPQYQGSIPEDVAGGTSVLRVSATDADTDLNGRVRYALDDDGDGAFAIDSSTGVIRTA 970

Query: 101  QCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLA 157
            + LD E+   Y     A D     ++T   V I + +VND  P F   +  L+     +A
Sbjct: 971  KPLDRESVAMYTLKAVAMDRGSPSLSTVVPVTIKIQDVNDSPPAFENDKIVLY-----IA 1025

Query: 158  DLTP-GSVIGKVEAADGDKG 176
            + +P GS +G++ A D D+G
Sbjct: 1026 ENSPIGSTVGEIYAHDPDEG 1045


>gi|426344007|ref|XP_004038569.1| PREDICTED: protocadherin-7 isoform 1 [Gorilla gorilla gorilla]
          Length = 1255

 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 62/203 (30%), Positives = 92/203 (45%), Gaps = 21/203 (10%)

Query: 37  GTSLRELQFSKNEYSVSALENLPVNYV--LLTVTTNKPRDLRVKYWLSNDYGERFSIS-R 93
           G S+ E+ F +N        N+P   V  +L    +  ++  + Y L +     F+I   
Sbjct: 536 GQSVVEVYFPEN--------NIPGERVATVLATDADSGKNAEIAYSLDSSVMGIFAIDPD 587

Query: 94  QGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELF 150
            GDI +   LD E  D Y F V A D    ++  S TV + V + ND DP+F    +  +
Sbjct: 588 SGDILVNTVLDREQTDRYEFKVNAKDKGIPVLQGSTTVIVQVADKNDNDPKFMQDVFTFY 647

Query: 151 LPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSI-NDSGHI-SIVDLSAL 207
           +      +L P S +G V   D DKG    +SL       +FSI ND+G I S +     
Sbjct: 648 VKE----NLQPNSPVGMVTVMDADKGRNAEMSLYIEENNNIFSIENDTGTIYSTMSFDRE 703

Query: 208 NTSTIQLVVVATDTGNPPRQASV 230
           + +T    V A D G+PPR A+ 
Sbjct: 704 HQTTYTFRVKAVDGGDPPRSATA 726



 Score = 44.7 bits (104), Expect = 0.079,   Method: Compositional matrix adjust.
 Identities = 77/316 (24%), Positives = 136/316 (43%), Gaps = 46/316 (14%)

Query: 30  TLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVT---TNKPRDLRVKYWLSNDYG 86
           T+IV  A  +  + +F ++ ++    ENL  N  +  VT    +K R+  +  ++  +  
Sbjct: 624 TVIVQVADKNDNDPKFMQDVFTFYVKENLQPNSPVGMVTVMDADKGRNAEMSLYIEEN-N 682

Query: 87  ERFSISRQ-GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRF 142
             FSI    G I      D E + +Y F V A D      + +ATV++ V++ ND  P  
Sbjct: 683 NIFSIENDTGTIYSTMSFDREHQTTYTFRVKAVDGGDPPRSATATVSLFVMDENDNAPTV 742

Query: 143 RYPQ---YELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-D 195
             P+   Y L  P   +      +V+  V A D D G    L+   + G   K+F I+  
Sbjct: 743 TLPKNISYTLLPPSSNVR-----TVVATVLATDSDDGINADLNYSIVGGNPFKLFEIDPT 797

Query: 196 SGHISIV-DLSALNTSTIQLVVVATDTGNPPRQASVPAIMHFPEA------IVQQASSKL 248
           SG +S+V  L+  +    +LVV   D+G P +  +    +   E+      I  Q +  L
Sbjct: 798 SGVVSLVGKLTQKHYGLHRLVVQVNDSGQPSQSTTTLVHVFVNESVSNATVIDSQIARSL 857

Query: 249 NSGTSSTVL-------------IILGVVLIVLGFVIILLILYIHKNKHTKN-NGPPGSSH 294
           ++  +  +              I++GVV  ++  ++I+LI+ + +   +KN NG      
Sbjct: 858 HTPLTQDIAGDPSYEISKQRLSIVIGVVAGIMTVILIILIVVMARYCRSKNKNGYEAGKK 917

Query: 295 SKNDSFLSNVILPEKH 310
              D F      P++H
Sbjct: 918 DHEDFF-----TPQQH 928



 Score = 43.1 bits (100), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 41/150 (27%), Positives = 69/150 (46%), Gaps = 26/150 (17%)

Query: 93  RQGDISLMQCLDYETEDSYRFTVY---ATDTLMTTSATVNISVVNVNDWDPRFRYPQYEL 149
           +Q  + +   LD E  DSY  T+      D   ++ A + + + +VND  PRF    YE 
Sbjct: 256 KQPQLIVKGALDREQRDSYELTLRVRDGGDPPRSSQAILRVLITDVNDNSPRFEKSVYEA 315

Query: 150 FLPHIPLADLTPGSVIGKVEAADGDKG---------DRVTLSLRGPYEKMFSIND-SGHI 199
            L      +  PG+ I ++ AAD D G            T S+R    ++  +++ SG +
Sbjct: 316 DLAE----NSAPGTPILQLRAADLDVGVNGQIEYVFGAATESVR----RLLRLDETSGWL 367

Query: 200 SI---VDLSALNTSTIQLVVVATDTGNPPR 226
           S+   +D   +N   ++  V+A D G PP+
Sbjct: 368 SVLHRIDREEVN--QLRFTVMARDRGQPPK 395


>gi|397513173|ref|XP_003826897.1| PREDICTED: protocadherin-7 isoform 4 [Pan paniscus]
          Length = 1197

 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 62/203 (30%), Positives = 92/203 (45%), Gaps = 21/203 (10%)

Query: 37  GTSLRELQFSKNEYSVSALENLPVNYV--LLTVTTNKPRDLRVKYWLSNDYGERFSIS-R 93
           G S+ E+ F +N        N+P   V  +L    +  ++  + Y L +     F+I   
Sbjct: 475 GQSVVEVYFPEN--------NIPGERVATVLATDADSGKNAEIAYSLDSSVMGIFAIDPD 526

Query: 94  QGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELF 150
            GDI +   LD E  D Y F V A D    ++  S TV + V + ND DP+F    +  +
Sbjct: 527 SGDILVNTVLDREQTDRYEFKVNAKDKGIPVLQGSTTVIVQVADKNDNDPKFMQDVFTFY 586

Query: 151 LPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSI-NDSGHI-SIVDLSAL 207
           +      +L P S +G V   D DKG    +SL       +FSI ND+G I S +     
Sbjct: 587 VKE----NLQPNSPVGMVTVMDADKGRNAEMSLYIEENNNIFSIENDTGTIYSTMSFDRE 642

Query: 208 NTSTIQLVVVATDTGNPPRQASV 230
           + +T    V A D G+PPR A+ 
Sbjct: 643 HQTTYTFRVKAVDGGDPPRSATA 665



 Score = 44.7 bits (104), Expect = 0.086,   Method: Compositional matrix adjust.
 Identities = 77/316 (24%), Positives = 136/316 (43%), Gaps = 46/316 (14%)

Query: 30  TLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVT---TNKPRDLRVKYWLSNDYG 86
           T+IV  A  +  + +F ++ ++    ENL  N  +  VT    +K R+  +  ++  +  
Sbjct: 563 TVIVQVADKNDNDPKFMQDVFTFYVKENLQPNSPVGMVTVMDADKGRNAEMSLYIEEN-N 621

Query: 87  ERFSISRQ-GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRF 142
             FSI    G I      D E + +Y F V A D      + +ATV++ V++ ND  P  
Sbjct: 622 NIFSIENDTGTIYSTMSFDREHQTTYTFRVKAVDGGDPPRSATATVSLFVMDENDNAPTV 681

Query: 143 RYPQ---YELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-D 195
             P+   Y L  P   +      +V+  V A D D G    L+   + G   K+F I+  
Sbjct: 682 TLPKNISYTLLPPSSNVR-----TVVATVLATDSDDGINADLNYSIVGGNPFKLFEIDPT 736

Query: 196 SGHISIV-DLSALNTSTIQLVVVATDTGNPPRQASVPAIMHFPEA------IVQQASSKL 248
           SG +S+V  L+  +    +LVV   D+G P +  +    +   E+      I  Q +  L
Sbjct: 737 SGVVSLVGKLTQKHYGLHRLVVQVNDSGQPSQSTTTLVHVFVNESVSNATVIDSQIARSL 796

Query: 249 NSGTSSTVL-------------IILGVVLIVLGFVIILLILYIHKNKHTKN-NGPPGSSH 294
           ++  +  +              I++GVV  ++  ++I+LI+ + +   +KN NG      
Sbjct: 797 HTPLTQDIAGDPSYEISKQRLSIVIGVVAGIMTVILIILIVVMARYCRSKNKNGYEAGKK 856

Query: 295 SKNDSFLSNVILPEKH 310
              D F      P++H
Sbjct: 857 DHEDFF-----TPQQH 867



 Score = 43.1 bits (100), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 41/150 (27%), Positives = 69/150 (46%), Gaps = 26/150 (17%)

Query: 93  RQGDISLMQCLDYETEDSYRFTVY---ATDTLMTTSATVNISVVNVNDWDPRFRYPQYEL 149
           +Q  + +   LD E  DSY  T+      D   ++ A + + + +VND  PRF    YE 
Sbjct: 195 KQPQLIVKGALDREQRDSYELTLRVRDGGDPPRSSQAILRVLITDVNDNSPRFEKSVYEA 254

Query: 150 FLPHIPLADLTPGSVIGKVEAADGDKG---------DRVTLSLRGPYEKMFSIND-SGHI 199
            L      +  PG+ I ++ AAD D G            T S+R    ++  +++ SG +
Sbjct: 255 DLAE----NSAPGTPILQLRAADLDVGVNGQIEYVFGAATESVR----RLLRLDETSGWL 306

Query: 200 SI---VDLSALNTSTIQLVVVATDTGNPPR 226
           S+   +D   +N   ++  V+A D G PP+
Sbjct: 307 SVLHRIDREEVN--QLRFTVMARDRGQPPK 334


>gi|395853837|ref|XP_003799407.1| PREDICTED: protocadherin-7 isoform 3 [Otolemur garnettii]
          Length = 1247

 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 62/203 (30%), Positives = 92/203 (45%), Gaps = 21/203 (10%)

Query: 37  GTSLRELQFSKNEYSVSALENLPVNYV--LLTVTTNKPRDLRVKYWLSNDYGERFSIS-R 93
           G S+ E+ F +N        N+P   V  +L    +  ++  + Y L +     F+I   
Sbjct: 536 GQSVVEVYFPEN--------NIPGQRVATVLATDADSGKNAEIAYSLDSSVMGVFAIDPD 587

Query: 94  QGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELF 150
            GDI +   LD E  D Y F V A D    ++  S TV + V + ND DP+F    +  +
Sbjct: 588 SGDILVNTVLDREQTDRYEFKVNAKDKGIPVLQGSTTVIVQVADKNDNDPKFMQDVFTFY 647

Query: 151 LPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSI-NDSGHI-SIVDLSAL 207
           +      +L P S +G V   D DKG    +SL       +FSI ND+G I S +     
Sbjct: 648 VKE----NLQPNSPVGMVTVMDADKGRNAEMSLFIQENSNIFSIENDTGTIYSTMSFDRE 703

Query: 208 NTSTIQLVVVATDTGNPPRQASV 230
           + +T    V A D G+PPR A+ 
Sbjct: 704 HQTTYTFRVKAVDGGDPPRSATA 726



 Score = 43.1 bits (100), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 41/160 (25%), Positives = 72/160 (45%), Gaps = 26/160 (16%)

Query: 93  RQGDISLMQCLDYETEDSYRFTVY---ATDTLMTTSATVNISVVNVNDWDPRFRYPQYEL 149
           +Q  + +   LD E  DSY  T+      D   ++ A + + + +VND  PRF    YE 
Sbjct: 256 KQPQLIVKGALDREQRDSYELTLRVRDGGDPPRSSQAILRVLITDVNDNSPRFEKSVYEA 315

Query: 150 FLPHIPLADLTPGSVIGKVEAADGDKG---------DRVTLSLRGPYEKMFSIND-SGHI 199
            L      +  PG+ I ++ AAD D G            T S+R    ++  +++ SG +
Sbjct: 316 DLAE----NSAPGTPILQLRAADLDVGVNGQIEYVFGAATESVR----RLLRLDETSGWL 367

Query: 200 SI---VDLSALNTSTIQLVVVATDTGNPPRQASVPAIMHF 236
           S+   +D   +N   ++  V+A D G PP+      +++ 
Sbjct: 368 SVLHRIDREEVN--QLRFTVMARDRGQPPKTDKATVVLNI 405


>gi|390460962|ref|XP_002745971.2| PREDICTED: protocadherin-7 isoform 1 [Callithrix jacchus]
          Length = 1247

 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 62/203 (30%), Positives = 92/203 (45%), Gaps = 21/203 (10%)

Query: 37  GTSLRELQFSKNEYSVSALENLPVNYV--LLTVTTNKPRDLRVKYWLSNDYGERFSIS-R 93
           G S+ E+ F +N        N+P   V  +L    +  ++  + Y L +     F+I   
Sbjct: 536 GQSVVEVYFPEN--------NIPGERVATVLATDADSGKNAEIAYSLDSSVMGIFAIDPD 587

Query: 94  QGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELF 150
            GDI +   LD E  D Y F V A D    ++  S TV + V + ND DP+F    +  +
Sbjct: 588 SGDILVNTVLDREQTDRYEFKVNAKDKGIPVLQGSTTVIVQVADKNDNDPKFMQDVFTFY 647

Query: 151 LPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSI-NDSGHI-SIVDLSAL 207
           +      +L P S +G V   D DKG    +SL       +FSI ND+G I S +     
Sbjct: 648 VKE----NLQPNSPVGMVTVMDADKGRNAEMSLYIEENNNIFSIENDTGTIYSTMSFDRE 703

Query: 208 NTSTIQLVVVATDTGNPPRQASV 230
           + +T    V A D G+PPR A+ 
Sbjct: 704 HQTTYTFRVKAVDGGDPPRSATA 726



 Score = 45.8 bits (107), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 79/318 (24%), Positives = 137/318 (43%), Gaps = 50/318 (15%)

Query: 30  TLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVT---TNKPRDLRVKYWLSNDYG 86
           T+IV  A  +  + +F ++ ++    ENL  N  +  VT    +K R+  +  ++  +  
Sbjct: 624 TVIVQVADKNDNDPKFMQDVFTFYVKENLQPNSPVGMVTVMDADKGRNAEMSLYIEEN-N 682

Query: 87  ERFSISRQ-GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRF 142
             FSI    G I      D E + +Y F V A D      + +ATV++ V++ ND  P  
Sbjct: 683 NIFSIENDTGTIYSTMSFDREHQTTYTFRVKAVDGGDPPRSATATVSLFVMDENDNAPTV 742

Query: 143 RYPQ---YELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-D 195
             P+   Y L  P   +      +V+  V A D D G    L+   + G   K+F I+  
Sbjct: 743 TLPRNISYTLLPPSSNVR-----TVVATVLATDSDDGINADLNYSIVGGNPFKLFEIDPT 797

Query: 196 SGHISIV-DLSALNTSTIQLVVVATDTGNPPRQASVPAIMHF--------PEAIVQQASS 246
           SG +S+V  L+  +    +LVV   D+G P +  S  A++H            I  Q + 
Sbjct: 798 SGVVSLVGKLTQKHYGLHRLVVQVNDSGQPSQ--STTALVHVFVNESVSNATVIDSQIAR 855

Query: 247 KLNSGTSSTVL-------------IILGVVLIVLGFVIILLILYIHKNKHTKN-NGPPGS 292
            L++  +  +              I++GVV  ++  ++I+LI+ + +   +KN NG    
Sbjct: 856 SLHTPLTQDIAGDPSYEISKQRLSIVIGVVAGIMTVILIILIVVMARYCRSKNKNGYEAG 915

Query: 293 SHSKNDSFLSNVILPEKH 310
                D F      P++H
Sbjct: 916 KKDHEDFF-----TPQQH 928



 Score = 43.1 bits (100), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 41/150 (27%), Positives = 69/150 (46%), Gaps = 26/150 (17%)

Query: 93  RQGDISLMQCLDYETEDSYRFTVY---ATDTLMTTSATVNISVVNVNDWDPRFRYPQYEL 149
           +Q  + +   LD E  DSY  T+      D   ++ A + + + +VND  PRF    YE 
Sbjct: 256 KQPQLIVKGALDREQRDSYELTLRVRDGGDPPRSSQAILRVLITDVNDNSPRFEKSVYEA 315

Query: 150 FLPHIPLADLTPGSVIGKVEAADGDKG---------DRVTLSLRGPYEKMFSIND-SGHI 199
            L      +  PG+ I ++ AAD D G            T S+R    ++  +++ SG +
Sbjct: 316 DLAE----NSAPGTPILQLRAADLDVGVNGQIEYVFGAATESVR----RLLRLDETSGWL 367

Query: 200 SI---VDLSALNTSTIQLVVVATDTGNPPR 226
           S+   +D   +N   ++  V+A D G PP+
Sbjct: 368 SVLHRIDREEVN--QLRFTVMARDRGQPPK 395


>gi|291084612|ref|NP_001166994.1| protocadherin-7 isoform d precursor [Homo sapiens]
          Length = 1255

 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 62/203 (30%), Positives = 92/203 (45%), Gaps = 21/203 (10%)

Query: 37  GTSLRELQFSKNEYSVSALENLPVNYV--LLTVTTNKPRDLRVKYWLSNDYGERFSIS-R 93
           G S+ E+ F +N        N+P   V  +L    +  ++  + Y L +     F+I   
Sbjct: 536 GQSVVEVYFPEN--------NIPGERVATVLATDADSGKNAEIAYSLDSSVMGIFAIDPD 587

Query: 94  QGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELF 150
            GDI +   LD E  D Y F V A D    ++  S TV + V + ND DP+F    +  +
Sbjct: 588 SGDILVNTVLDREQTDRYEFKVNAKDKGIPVLQGSTTVIVQVADKNDNDPKFMQDVFTFY 647

Query: 151 LPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSI-NDSGHI-SIVDLSAL 207
           +      +L P S +G V   D DKG    +SL       +FSI ND+G I S +     
Sbjct: 648 VKE----NLQPNSPVGMVTVMDADKGRNAEMSLYIEENNNIFSIENDTGTIYSTMSFDRE 703

Query: 208 NTSTIQLVVVATDTGNPPRQASV 230
           + +T    V A D G+PPR A+ 
Sbjct: 704 HQTTYTFRVKAVDGGDPPRSATA 726



 Score = 45.4 bits (106), Expect = 0.051,   Method: Compositional matrix adjust.
 Identities = 78/318 (24%), Positives = 135/318 (42%), Gaps = 50/318 (15%)

Query: 30  TLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVT---TNKPRDLRVKYWLSNDYG 86
           T+IV  A  +  + +F ++ ++    ENL  N  +  VT    +K R+  +  ++  +  
Sbjct: 624 TVIVQVADKNDNDPKFMQDVFTFYVKENLQPNSPVGMVTVMDADKGRNAEMSLYIEEN-N 682

Query: 87  ERFSISRQ-GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRF 142
             FSI    G I      D E + +Y F V A D      + +ATV++ V++ ND  P  
Sbjct: 683 NIFSIENDTGTIYSTMSFDREHQTTYTFRVKAVDGGDPPRSATATVSLFVMDENDNAPTV 742

Query: 143 RYPQ---YELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-D 195
             P+   Y L  P   +      +V+  V A D D G    L+   + G   K+F I+  
Sbjct: 743 TLPKNISYTLLPPSSNVR-----TVVATVLATDSDDGINADLNYSIVGGNPFKLFEIDPT 797

Query: 196 SGHISIV-DLSALNTSTIQLVVVATDTGNPPR--------------------QASVPAIM 234
           SG +S+V  L+  +    +LVV   D+G P +                     + +   +
Sbjct: 798 SGVVSLVGKLTQKHYGLHRLVVQVNDSGQPSQSTTTLVHVFVNESVSNATAIDSQIARSL 857

Query: 235 HFPEAIVQQASSKLNSGTSSTVL-IILGVVLIVLGFVIILLILYIHKNKHTKN-NGPPGS 292
           H P  + Q  +   +   S   L I++GVV  ++  ++I+LI+ + +   +KN NG    
Sbjct: 858 HIP--LTQDIAGDPSYEISKQRLSIVIGVVAGIMTVILIILIVVMARYCRSKNKNGYEAG 915

Query: 293 SHSKNDSFLSNVILPEKH 310
                D F      P++H
Sbjct: 916 KKDHEDFF-----TPQQH 928



 Score = 43.1 bits (100), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 41/150 (27%), Positives = 69/150 (46%), Gaps = 26/150 (17%)

Query: 93  RQGDISLMQCLDYETEDSYRFTVY---ATDTLMTTSATVNISVVNVNDWDPRFRYPQYEL 149
           +Q  + +   LD E  DSY  T+      D   ++ A + + + +VND  PRF    YE 
Sbjct: 256 KQPQLIVKGALDREQRDSYELTLRVRDGGDPPRSSQAILRVLITDVNDNSPRFEKSVYEA 315

Query: 150 FLPHIPLADLTPGSVIGKVEAADGDKG---------DRVTLSLRGPYEKMFSIND-SGHI 199
            L      +  PG+ I ++ AAD D G            T S+R    ++  +++ SG +
Sbjct: 316 DLAE----NSAPGTPILQLRAADLDVGVNGQIEYVFGAATESVR----RLLRLDETSGWL 367

Query: 200 SI---VDLSALNTSTIQLVVVATDTGNPPR 226
           S+   +D   +N   ++  V+A D G PP+
Sbjct: 368 SVLHRIDREEVN--QLRFTVMARDRGQPPK 395


>gi|387540098|gb|AFJ70676.1| protocadherin-7 isoform d precursor [Macaca mulatta]
          Length = 1255

 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 62/203 (30%), Positives = 92/203 (45%), Gaps = 21/203 (10%)

Query: 37  GTSLRELQFSKNEYSVSALENLPVNYV--LLTVTTNKPRDLRVKYWLSNDYGERFSIS-R 93
           G S+ E+ F +N        N+P   V  +L    +  ++  + Y L +     F+I   
Sbjct: 536 GQSVVEVYFPEN--------NIPGERVATVLATDADSGKNAEIAYSLDSSVMGIFAIDPD 587

Query: 94  QGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELF 150
            GDI +   LD E  D Y F V A D    ++  S TV + V + ND DP+F    +  +
Sbjct: 588 SGDILVNTVLDREQTDRYEFKVNAKDKGIPVLQGSTTVIVQVADKNDNDPKFMQDVFTFY 647

Query: 151 LPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSI-NDSGHI-SIVDLSAL 207
           +      +L P S +G V   D DKG    +SL       +FSI ND+G I S +     
Sbjct: 648 VKE----NLQPNSPVGMVTVMDADKGRNAEMSLYIEENNNIFSIENDTGTIYSTMSFDRE 703

Query: 208 NTSTIQLVVVATDTGNPPRQASV 230
           + +T    V A D G+PPR A+ 
Sbjct: 704 HQTTYTFRVKAVDGGDPPRSATA 726



 Score = 43.1 bits (100), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 41/150 (27%), Positives = 69/150 (46%), Gaps = 26/150 (17%)

Query: 93  RQGDISLMQCLDYETEDSYRFTVY---ATDTLMTTSATVNISVVNVNDWDPRFRYPQYEL 149
           +Q  + +   LD E  DSY  T+      D   ++ A + + + +VND  PRF    YE 
Sbjct: 256 KQPQLIVKGALDREQRDSYELTLRVRDGGDPPRSSQAILRVLITDVNDNSPRFEKSVYEA 315

Query: 150 FLPHIPLADLTPGSVIGKVEAADGDKG---------DRVTLSLRGPYEKMFSIND-SGHI 199
            L      +  PG+ I ++ AAD D G            T S+R    ++  +++ SG +
Sbjct: 316 DLAE----NSAPGTPILQLRAADLDVGVNGQIEYVFGAATESVR----RLLRLDETSGWL 367

Query: 200 SI---VDLSALNTSTIQLVVVATDTGNPPR 226
           S+   +D   +N   ++  V+A D G PP+
Sbjct: 368 SVLHRIDREEVN--QLRFTVMARDRGQPPK 395


>gi|348563329|ref|XP_003467460.1| PREDICTED: protocadherin-7-like isoform 2 [Cavia porcellus]
          Length = 1073

 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 62/203 (30%), Positives = 92/203 (45%), Gaps = 21/203 (10%)

Query: 37  GTSLRELQFSKNEYSVSALENLPVNYV--LLTVTTNKPRDLRVKYWLSNDYGERFSIS-R 93
           G S+ E+ F +N        N+P   V  +L    +  ++  + Y L +     F+I   
Sbjct: 537 GQSVVEVYFPEN--------NIPGERVATVLATDADSGKNAEIAYSLDSAVMGIFAIDPD 588

Query: 94  QGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELF 150
            GDI +   LD E  D Y F V A D    ++  S TV + V + ND DP+F    +  +
Sbjct: 589 SGDILVNTVLDREQTDRYEFKVNAKDKGIPVLQGSTTVIVQVADKNDNDPKFMQDIFTFY 648

Query: 151 LPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSI-NDSGHI-SIVDLSAL 207
           +      +L P S +G V   D DKG    +SL       +FSI ND+G I S +     
Sbjct: 649 VKE----NLQPNSPVGMVTVMDADKGRNAEMSLYIEENSNIFSIENDTGTIYSTMSFDRE 704

Query: 208 NTSTIQLVVVATDTGNPPRQASV 230
           + +T    V A D G+PPR A+ 
Sbjct: 705 HQTTYTFRVKAVDGGDPPRSATA 727



 Score = 46.6 bits (109), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 76/317 (23%), Positives = 138/317 (43%), Gaps = 48/317 (15%)

Query: 30  TLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVT---TNKPRDLRVKYWLSNDYG 86
           T+IV  A  +  + +F ++ ++    ENL  N  +  VT    +K R+  +  ++  +  
Sbjct: 625 TVIVQVADKNDNDPKFMQDIFTFYVKENLQPNSPVGMVTVMDADKGRNAEMSLYIEEN-S 683

Query: 87  ERFSISRQ-GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRF 142
             FSI    G I      D E + +Y F V A D      + +ATV++ V++ ND  P  
Sbjct: 684 NIFSIENDTGTIYSTMSFDREHQTTYTFRVKAVDGGDPPRSATATVSLFVMDENDNAPTV 743

Query: 143 RYPQ---YELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIND- 195
             P+   Y L  P   +      +V+  V A D D G    L+   + G   K+F I+  
Sbjct: 744 TLPRNISYTLLPPSSNVR-----TVVATVLATDSDDGINADLNYSIVGGNPFKLFEIDST 798

Query: 196 SGHISIV-DLSALNTSTIQLVVVATDTGNPPRQASVPAIMHF--------PEAIVQQASS 246
           SG +S+V  L+  +    +LVV   D+G P +  S  A++H            I  Q + 
Sbjct: 799 SGVVSLVGKLTHKHYGLHRLVVQVNDSGQPSQ--STTALVHVFVNESVSNATVIDSQIAR 856

Query: 247 KLNSGTSSTVL-------------IILGVVLIVLGFVIILLILYIHKNKHTKNNGPPGSS 293
            L++  +  +              I++GVV  ++  ++I+LI+ + +   +KN     + 
Sbjct: 857 SLHTPLTQDIAGDPSYEISKQRLSIVIGVVAGIMTVILIILIVVMARYCRSKNKNGYEAG 916

Query: 294 HSKNDSFLSNVILPEKH 310
              ++ F +    P++H
Sbjct: 917 KKDHEDFFT----PQQH 929



 Score = 43.1 bits (100), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 41/150 (27%), Positives = 69/150 (46%), Gaps = 26/150 (17%)

Query: 93  RQGDISLMQCLDYETEDSYRFTVY---ATDTLMTTSATVNISVVNVNDWDPRFRYPQYEL 149
           +Q  + +   LD E  DSY  T+      D   ++ A + + + +VND  PRF    YE 
Sbjct: 257 KQPQLIVKGALDREQRDSYELTLRVRDGGDPPRSSQAILRVLITDVNDNSPRFEKSVYEA 316

Query: 150 FLPHIPLADLTPGSVIGKVEAADGDKG---------DRVTLSLRGPYEKMFSIND-SGHI 199
            L      +  PG+ I ++ AAD D G            T S+R    ++  +++ SG +
Sbjct: 317 DLAE----NSAPGTPILQLRAADLDVGVNGQIEYVFGAATESVR----RLLRLDETSGWL 368

Query: 200 SI---VDLSALNTSTIQLVVVATDTGNPPR 226
           S+   +D   +N   ++  V+A D G PP+
Sbjct: 369 SVLHRIDREEVN--QLRFTVMARDRGQPPK 396


>gi|410957822|ref|XP_003985523.1| PREDICTED: protocadherin-7 isoform 3 [Felis catus]
          Length = 1226

 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 62/203 (30%), Positives = 92/203 (45%), Gaps = 21/203 (10%)

Query: 37  GTSLRELQFSKNEYSVSALENLPVNYV--LLTVTTNKPRDLRVKYWLSNDYGERFSIS-R 93
           G S+ E+ F +N        N+P   V  +L    +  ++  + Y L +     F+I   
Sbjct: 515 GQSVVEVYFPEN--------NIPGERVATVLATDADSGKNAEIAYSLDSSVMGIFAIDPD 566

Query: 94  QGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELF 150
            GDI +   LD E  D Y F V A D    ++  S TV + V + ND DP+F    +  +
Sbjct: 567 SGDILVNTVLDREQTDRYEFKVNAKDKGIPVLQGSTTVIVQVADKNDNDPKFMQDVFTFY 626

Query: 151 LPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSI-NDSGHI-SIVDLSAL 207
           +      +L P S +G V   D DKG    +SL       +FSI ND+G I S +     
Sbjct: 627 VKE----NLQPNSPVGMVTVMDADKGRNAEMSLYIEENSNIFSIENDTGTIYSTMSFDRE 682

Query: 208 NTSTIQLVVVATDTGNPPRQASV 230
           + +T    V A D G+PPR A+ 
Sbjct: 683 HQTTYTFRVKAVDGGDPPRSATA 705



 Score = 43.1 bits (100), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 41/160 (25%), Positives = 72/160 (45%), Gaps = 26/160 (16%)

Query: 93  RQGDISLMQCLDYETEDSYRFTVY---ATDTLMTTSATVNISVVNVNDWDPRFRYPQYEL 149
           +Q  + +   LD E  DSY  T+      D   ++ A + + + +VND  PRF    YE 
Sbjct: 235 KQPQLIVKGALDREQRDSYELTLRVRDGGDPPRSSQAILRVLITDVNDNSPRFEKSVYEA 294

Query: 150 FLPHIPLADLTPGSVIGKVEAADGDKG---------DRVTLSLRGPYEKMFSIND-SGHI 199
            L      +  PG+ I ++ AAD D G            T S+R    ++  +++ SG +
Sbjct: 295 DLAE----NSAPGTPILQLRAADLDVGVNGQIEYVFGAATESVR----RLLRLDETSGWL 346

Query: 200 SI---VDLSALNTSTIQLVVVATDTGNPPRQASVPAIMHF 236
           S+   +D   +N   ++  V+A D G PP+      +++ 
Sbjct: 347 SVLHRIDREEVN--QLRFTVMARDRGQPPKTDKATVVLNI 384


>gi|405978306|gb|EKC42707.1| Protocadherin-11 X-linked [Crassostrea gigas]
          Length = 1117

 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 73/299 (24%), Positives = 131/299 (43%), Gaps = 39/299 (13%)

Query: 2   INEDDFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVN 61
           +N   F    T+VVR    D  D Y +                FS+N Y +   E  P++
Sbjct: 510 VNGQKFTSTATVVVRIT--DKNDEYPI----------------FSRNRYDIIVPEEQPIS 551

Query: 62  YVL---LTVTTNKPRDLRVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYAT 118
             +     V  +   + +  + +   Y   F+I   G +     LD E ++ Y F +Y  
Sbjct: 552 KPIEQFSAVDKDIGGNGQFYFRIEEGYSNIFTIDASGGLKTKILLDREKKEEYHFQIYVI 611

Query: 119 DT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDK 175
           D     +T+SA V++ + ++ND  P+  YP        + L  + P ++I +V A D DK
Sbjct: 612 DRGTPALTSSANVSLYLKDINDNPPQVYYPNDRNNSISLSLQSV-PKTIIARVIANDTDK 670

Query: 176 GDRVTLS---LRGPYEKMFSI-NDSGHISIVDLSALNTS-TIQLVVVATDTGNPPRQASV 230
           G    L+   ++G   K+FSI N +G I +  +     + T  LV+  TD+G       V
Sbjct: 671 GVNAHLTYSIIQGNVVKLFSIDNQTGVIRLERVPVEEEAGTYNLVIAVTDSG-------V 723

Query: 231 PAIMHFPEAIVQQASSKLNSGTSSTVLIILGVVLIV-LGFVIILLILYIHKNKHTKNNG 288
           P+  ++   ++     K NS     V+++  V +++ L  ++I+ I+    N+  K+ G
Sbjct: 724 PSKTNWTHLVI-IVGEKSNSQNLIIVIVVCSVTMVISLALIMIICIIRKRDNEKYKDKG 781



 Score = 42.4 bits (98), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 37/111 (33%), Positives = 52/111 (46%), Gaps = 20/111 (18%)

Query: 95  GDISLMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFL 151
           G+I +   LDYE E  Y+F V A D   T ++T   VNI+V+++ND       PQ  + L
Sbjct: 274 GEIKISSPLDYEQETKYQFVVIARDNGRTSLSTQVIVNITVLDIND-----NAPQININL 328

Query: 152 PHIP-----LADLTPGSVIGKVEAADGDKGDRVTLSLRGPYE-----KMFS 192
           P  P     + +   G  I  V   D D G+  T++     E     KMFS
Sbjct: 329 P--PGGTGVVENAEIGQYIATVVVTDSDGGENGTVNCTISNENFNIVKMFS 377


>gi|291084609|ref|NP_115833.2| protocadherin-7 isoform c precursor [Homo sapiens]
          Length = 1247

 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 62/203 (30%), Positives = 92/203 (45%), Gaps = 21/203 (10%)

Query: 37  GTSLRELQFSKNEYSVSALENLPVNYV--LLTVTTNKPRDLRVKYWLSNDYGERFSIS-R 93
           G S+ E+ F +N        N+P   V  +L    +  ++  + Y L +     F+I   
Sbjct: 536 GQSVVEVYFPEN--------NIPGERVATVLATDADSGKNAEIAYSLDSSVMGIFAIDPD 587

Query: 94  QGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELF 150
            GDI +   LD E  D Y F V A D    ++  S TV + V + ND DP+F    +  +
Sbjct: 588 SGDILVNTVLDREQTDRYEFKVNAKDKGIPVLQGSTTVIVQVADKNDNDPKFMQDVFTFY 647

Query: 151 LPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSI-NDSGHI-SIVDLSAL 207
           +      +L P S +G V   D DKG    +SL       +FSI ND+G I S +     
Sbjct: 648 VKE----NLQPNSPVGMVTVMDADKGRNAEMSLYIEENNNIFSIENDTGTIYSTMSFDRE 703

Query: 208 NTSTIQLVVVATDTGNPPRQASV 230
           + +T    V A D G+PPR A+ 
Sbjct: 704 HQTTYTFRVKAVDGGDPPRSATA 726



 Score = 45.4 bits (106), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 78/318 (24%), Positives = 135/318 (42%), Gaps = 50/318 (15%)

Query: 30  TLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVT---TNKPRDLRVKYWLSNDYG 86
           T+IV  A  +  + +F ++ ++    ENL  N  +  VT    +K R+  +  ++  +  
Sbjct: 624 TVIVQVADKNDNDPKFMQDVFTFYVKENLQPNSPVGMVTVMDADKGRNAEMSLYIEEN-N 682

Query: 87  ERFSISRQ-GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRF 142
             FSI    G I      D E + +Y F V A D      + +ATV++ V++ ND  P  
Sbjct: 683 NIFSIENDTGTIYSTMSFDREHQTTYTFRVKAVDGGDPPRSATATVSLFVMDENDNAPTV 742

Query: 143 RYPQ---YELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-D 195
             P+   Y L  P   +      +V+  V A D D G    L+   + G   K+F I+  
Sbjct: 743 TLPKNISYTLLPPSSNVR-----TVVATVLATDSDDGINADLNYSIVGGNPFKLFEIDPT 797

Query: 196 SGHISIV-DLSALNTSTIQLVVVATDTGNPPR--------------------QASVPAIM 234
           SG +S+V  L+  +    +LVV   D+G P +                     + +   +
Sbjct: 798 SGVVSLVGKLTQKHYGLHRLVVQVNDSGQPSQSTTTLVHVFVNESVSNATAIDSQIARSL 857

Query: 235 HFPEAIVQQASSKLNSGTSSTVL-IILGVVLIVLGFVIILLILYIHKNKHTKN-NGPPGS 292
           H P  + Q  +   +   S   L I++GVV  ++  ++I+LI+ + +   +KN NG    
Sbjct: 858 HIP--LTQDIAGDPSYEISKQRLSIVIGVVAGIMTVILIILIVVMARYCRSKNKNGYEAG 915

Query: 293 SHSKNDSFLSNVILPEKH 310
                D F      P++H
Sbjct: 916 KKDHEDFF-----TPQQH 928



 Score = 43.1 bits (100), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 41/150 (27%), Positives = 69/150 (46%), Gaps = 26/150 (17%)

Query: 93  RQGDISLMQCLDYETEDSYRFTVY---ATDTLMTTSATVNISVVNVNDWDPRFRYPQYEL 149
           +Q  + +   LD E  DSY  T+      D   ++ A + + + +VND  PRF    YE 
Sbjct: 256 KQPQLIVKGALDREQRDSYELTLRVRDGGDPPRSSQAILRVLITDVNDNSPRFEKSVYEA 315

Query: 150 FLPHIPLADLTPGSVIGKVEAADGDKG---------DRVTLSLRGPYEKMFSIND-SGHI 199
            L      +  PG+ I ++ AAD D G            T S+R    ++  +++ SG +
Sbjct: 316 DLAE----NSAPGTPILQLRAADLDVGVNGQIEYVFGAATESVR----RLLRLDETSGWL 367

Query: 200 SI---VDLSALNTSTIQLVVVATDTGNPPR 226
           S+   +D   +N   ++  V+A D G PP+
Sbjct: 368 SVLHRIDREEVN--QLRFTVMARDRGQPPK 395


>gi|426344009|ref|XP_004038570.1| PREDICTED: protocadherin-7 isoform 2 [Gorilla gorilla gorilla]
          Length = 1247

 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 62/203 (30%), Positives = 92/203 (45%), Gaps = 21/203 (10%)

Query: 37  GTSLRELQFSKNEYSVSALENLPVNYV--LLTVTTNKPRDLRVKYWLSNDYGERFSIS-R 93
           G S+ E+ F +N        N+P   V  +L    +  ++  + Y L +     F+I   
Sbjct: 536 GQSVVEVYFPEN--------NIPGERVATVLATDADSGKNAEIAYSLDSSVMGIFAIDPD 587

Query: 94  QGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELF 150
            GDI +   LD E  D Y F V A D    ++  S TV + V + ND DP+F    +  +
Sbjct: 588 SGDILVNTVLDREQTDRYEFKVNAKDKGIPVLQGSTTVIVQVADKNDNDPKFMQDVFTFY 647

Query: 151 LPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSI-NDSGHI-SIVDLSAL 207
           +      +L P S +G V   D DKG    +SL       +FSI ND+G I S +     
Sbjct: 648 VKE----NLQPNSPVGMVTVMDADKGRNAEMSLYIEENNNIFSIENDTGTIYSTMSFDRE 703

Query: 208 NTSTIQLVVVATDTGNPPRQASV 230
           + +T    V A D G+PPR A+ 
Sbjct: 704 HQTTYTFRVKAVDGGDPPRSATA 726



 Score = 44.7 bits (104), Expect = 0.082,   Method: Compositional matrix adjust.
 Identities = 77/316 (24%), Positives = 136/316 (43%), Gaps = 46/316 (14%)

Query: 30  TLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVT---TNKPRDLRVKYWLSNDYG 86
           T+IV  A  +  + +F ++ ++    ENL  N  +  VT    +K R+  +  ++  +  
Sbjct: 624 TVIVQVADKNDNDPKFMQDVFTFYVKENLQPNSPVGMVTVMDADKGRNAEMSLYIEEN-N 682

Query: 87  ERFSISRQ-GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRF 142
             FSI    G I      D E + +Y F V A D      + +ATV++ V++ ND  P  
Sbjct: 683 NIFSIENDTGTIYSTMSFDREHQTTYTFRVKAVDGGDPPRSATATVSLFVMDENDNAPTV 742

Query: 143 RYPQ---YELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-D 195
             P+   Y L  P   +      +V+  V A D D G    L+   + G   K+F I+  
Sbjct: 743 TLPKNISYTLLPPSSNVR-----TVVATVLATDSDDGINADLNYSIVGGNPFKLFEIDPT 797

Query: 196 SGHISIV-DLSALNTSTIQLVVVATDTGNPPRQASVPAIMHFPEA------IVQQASSKL 248
           SG +S+V  L+  +    +LVV   D+G P +  +    +   E+      I  Q +  L
Sbjct: 798 SGVVSLVGKLTQKHYGLHRLVVQVNDSGQPSQSTTTLVHVFVNESVSNATVIDSQIARSL 857

Query: 249 NSGTSSTVL-------------IILGVVLIVLGFVIILLILYIHKNKHTKN-NGPPGSSH 294
           ++  +  +              I++GVV  ++  ++I+LI+ + +   +KN NG      
Sbjct: 858 HTPLTQDIAGDPSYEISKQRLSIVIGVVAGIMTVILIILIVVMARYCRSKNKNGYEAGKK 917

Query: 295 SKNDSFLSNVILPEKH 310
              D F      P++H
Sbjct: 918 DHEDFF-----TPQQH 928



 Score = 43.1 bits (100), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 41/150 (27%), Positives = 69/150 (46%), Gaps = 26/150 (17%)

Query: 93  RQGDISLMQCLDYETEDSYRFTVY---ATDTLMTTSATVNISVVNVNDWDPRFRYPQYEL 149
           +Q  + +   LD E  DSY  T+      D   ++ A + + + +VND  PRF    YE 
Sbjct: 256 KQPQLIVKGALDREQRDSYELTLRVRDGGDPPRSSQAILRVLITDVNDNSPRFEKSVYEA 315

Query: 150 FLPHIPLADLTPGSVIGKVEAADGDKG---------DRVTLSLRGPYEKMFSIND-SGHI 199
            L      +  PG+ I ++ AAD D G            T S+R    ++  +++ SG +
Sbjct: 316 DLAE----NSAPGTPILQLRAADLDVGVNGQIEYVFGAATESVR----RLLRLDETSGWL 367

Query: 200 SI---VDLSALNTSTIQLVVVATDTGNPPR 226
           S+   +D   +N   ++  V+A D G PP+
Sbjct: 368 SVLHRIDREEVN--QLRFTVMARDRGQPPK 395


>gi|390337821|ref|XP_785601.3| PREDICTED: protocadherin Fat 4 [Strongylocentrotus purpuratus]
          Length = 5000

 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 63/195 (32%), Positives = 93/195 (47%), Gaps = 17/195 (8%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDLR---VKYWL-SNDYGERFSISR-QGDISL 99
            FS   Y  +  E+ PV    L VT + P +     ++Y + S D G  F+I    G +S+
Sbjct: 2186 FSMTPYEATLDEDTPVGLEFLKVTASDPDEGLNSIIRYSIFSGDSGRAFAIDPVTGVLSV 2245

Query: 100  MQCLDYETEDSYRFTVYATDTLMTT---SATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
               L+YE   SY  TV A D   +T   S TV I+V +VND  P F     + + P I  
Sbjct: 2246 NSGLNYEQRSSYTLTVRAQDQGYSTQVSSVTVTITVADVNDNAPVFE----DSYAPSIME 2301

Query: 157  ADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIND-SGHISIVD-LSALNTSTI 212
             +L P + I +V A D D G    +   L   Y  +F+I   SG I + + L   + +  
Sbjct: 2302 NNL-PNADIVQVRADDADSGVNGMINFRLESDYNGLFTIGSTSGLIQVTEVLDYEDQNEF 2360

Query: 213  QLVVVATDTGNPPRQ 227
            +L+V+A D+G P  Q
Sbjct: 2361 ELIVIAEDSGTPSHQ 2375



 Score = 48.5 bits (114), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 48/156 (30%), Positives = 71/156 (45%), Gaps = 14/156 (8%)

Query: 84   DYGERFSISRQ-GDISLMQCLDYETEDSYRFTVYATDTLMTTSA---TVNISVVNVNDWD 139
            ++GE F +  Q G++S+++ LDYE   S+   + ATDT  T  +    + +SV++VND  
Sbjct: 2633 NHGEHFGVGSQSGEVSIIKELDYEESKSFSLWIAATDTANTQLSDFVELQVSVLDVNDNA 2692

Query: 140  PRFRYPQYELFLPHIPLADLTPGSV-IGKVEAADGD---KGDRVTLSLRGPYEKMFSIND 195
            P F    Y        + +   G V +  V A D D    GD       G     F I+ 
Sbjct: 2693 PLFDQSVY-----FTSVVEEQSGQVQVVSVSATDEDSLSNGDVSYAITLGNTNNAFDISS 2747

Query: 196  SGHISIVD-LSALNTSTIQLVVVATDTGNPPRQASV 230
            SG I+    L     ++  L V ATD GNP +  S 
Sbjct: 2748 SGVITTTQPLDRETVASYILTVEATDGGNPSQSGSA 2783



 Score = 47.8 bits (112), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 65/226 (28%), Positives = 103/226 (45%), Gaps = 25/226 (11%)

Query: 18   IQYDNQDRY-----ALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVT---T 69
            IQ   +DR      A A LIV+          F   EY     EN P    ++TVT    
Sbjct: 3190 IQVTAEDRAMYSQSATAILIVTVTDVDDNPPVFLPREYRADVFENSPSATPVVTVTATDA 3249

Query: 70   NKPRDLRVKYWLSNDYG-ERFSISRQGDISLMQC-LDYET-EDSYRFTVYATD--TLMTT 124
            +   +   +Y +S   G + F+I+ +  + L Q  LDYET + +Y  TV AT+    M  
Sbjct: 3250 DTGTNADFEYIISGGDGTDFFTINPETGLILTQGNLDYETGKTTYHLTVAATNEQATMVD 3309

Query: 125  SATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVT---L 181
             A V ++++  N++ P+F   QY+ ++        T G+ +G V A D D GD      L
Sbjct: 3310 YAHVIVTLLGENEFYPQFTQHQYDFYVNE----HATDGAPVGVVLATDDDLGDDGIVNYL 3365

Query: 182  SLRGPYEKMFSIN-DSGHISIV----DLSALNTSTIQLVVVATDTG 222
             + G   + F++N +SG I++      L      T+ L V+A + G
Sbjct: 3366 FIGGSNLQGFNVNLESGQITVAYENGRLDRETADTVLLSVLAKNEG 3411



 Score = 47.0 bits (110), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 50/189 (26%), Positives = 80/189 (42%), Gaps = 28/189 (14%)

Query: 14   VVRAIQYDNQDRYALATLIVSKAGTSLREL----------------QFSKNEYSVSALEN 57
            V   + Y++Q+ + L  +I   +GT   +                 +F  + Y  +  E+
Sbjct: 2348 VTEVLDYEDQNEFEL-IVIAEDSGTPSHQTRTTMTLTVNDDNDHDPEFVSDFYRATVSED 2406

Query: 58   LPVNYVLLTVT-TNKPRDLRVKYWLSNDYGERFSIS-RQGDISLMQCLDYETEDSYRFTV 115
               +  ++ VT T+      ++Y L++D G +F+I    G I     LD E + SY  TV
Sbjct: 2407 ASADTFVIQVTATDVDATAALRYRLNSDIGSKFTIDPLGGRILTTGLLDREVQSSYLLTV 2466

Query: 116  YATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAAD 172
               D    L TTS  V + V++VND  PRF    Y   LP    A    G  +  ++A D
Sbjct: 2467 TVDDGPSRLATTS--VRVEVLDVNDNPPRFSPTSYTATLP----ATSQQGCFVAAIQATD 2520

Query: 173  GDKGDRVTL 181
             D  D   +
Sbjct: 2521 TDLEDNAAI 2529



 Score = 45.1 bits (105), Expect = 0.056,   Method: Compositional matrix adjust.
 Identities = 46/159 (28%), Positives = 74/159 (46%), Gaps = 16/159 (10%)

Query: 82   SNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDTLM------TTSATVNISVVNV 135
            S D  +RF++   G I  ++ LD E E  Y   V A+D  +      +++A V+I V ++
Sbjct: 2018 SGDPSQRFTVYPNGTIVTIKNLDREPESFYNLEVVASDMTLDPEDRRSSTAQVSIIVTDI 2077

Query: 136  NDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDR---VTLSLRGPYEKMFS 192
            ND  PRF  P        + +A+ T  +VI  V  A+ D  +R   V   L  P      
Sbjct: 2078 NDNAPRFTNPD------SVEIAEDTRTNVIIMVLRAEDDDVERNSYVEYYLLTPGVPFAV 2131

Query: 193  INDSGHISIVD-LSALNTSTIQLVVVATDTGNPPRQASV 230
                G++ +   L     S+  L+V ATD G PP+ +++
Sbjct: 2132 SRVEGNMQVTGPLDRETESSYALLVQATDKGTPPQSSTM 2170



 Score = 44.7 bits (104), Expect = 0.081,   Method: Compositional matrix adjust.
 Identities = 34/127 (26%), Positives = 60/127 (47%), Gaps = 10/127 (7%)

Query: 56   ENLPVNYVL---LTVTTNKPRDLRVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYR 112
            E++PVN ++   L    ++  +  + Y +++   + F I   G + + + LD E  D Y 
Sbjct: 1031 ESIPVNSIVIHALATDADQGTNGLISYRITSGNTDSFGIFPDGMVYVKRALDREQVDQYD 1090

Query: 113  FTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVE 169
             T+ ATD     MT++  + I V++ ND  P F    Y  +L      +   G+ +G + 
Sbjct: 1091 LTIEATDGGVPSMTSTLMLEIIVLDENDNRPFFDNATYNFYLSE----EDDIGAAVGTIH 1146

Query: 170  AADGDKG 176
            A D D G
Sbjct: 1147 AVDNDVG 1153



 Score = 43.5 bits (101), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 43/133 (32%), Positives = 64/133 (48%), Gaps = 11/133 (8%)

Query: 95   GDISLMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFL 151
            G   L Q LDYE +  Y  TV ATD   +  +++ATV I+V +VND +P +    Y   +
Sbjct: 1927 GAFRLQQSLDYEVKQHYFMTVMATDKGSSPRSSTATVYINVEDVNDNNPVYNPVDYSEEV 1986

Query: 152  PHIPLADLTPGSVIGKVEAADGDKGDRVTLSL---RGPYEKMFSINDSGHI-SIVDLSAL 207
            P     D+  G+ +  + A D D G    L      G   + F++  +G I +I +L   
Sbjct: 1987 PE----DVAIGTSVVTLTATDLDSGSNGELQFSIASGDPSQRFTVYPNGTIVTIKNLDRE 2042

Query: 208  NTSTIQLVVVATD 220
              S   L VVA+D
Sbjct: 2043 PESFYNLEVVASD 2055



 Score = 43.1 bits (100), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 60/232 (25%), Positives = 92/232 (39%), Gaps = 21/232 (9%)

Query: 12   TLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTV-TTN 70
            TL V A     Q     AT+ V+   T    L+F  N Y     EN P    + TV  T+
Sbjct: 780  TLTVTAQDGSGQAAAQSATIFVTVTDTLDNPLEFELNPYRFQLEENRPNRTEVGTVLATS 839

Query: 71   KPRDLRVKYWLSN-DYGERFSIS-RQGDISLMQCLDYETEDS--YRFTVYATDTLMTTSA 126
               ++ + Y + N D    F I    G I     +D E  +S  +R TV A D       
Sbjct: 840  MDLNVEITYVIVNGDPNGLFVIDFYSGVIKTTLSIDREAHESASFRLTVLAVDGSQNGQT 899

Query: 127  TVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIG------KVEAADGDKGDRVT 180
             V I ++++ND  P F  P+ ++        D+     +G      +V  AD    + + 
Sbjct: 900  VVEIEILDINDNAPVFALPEDQV--------DVVENWAVGNKFYAAQVTDADSPPNNVIL 951

Query: 181  LSLRGPYEKMFSINDSGHISIV--DLSALNTSTIQLVVVATDTGNPPRQASV 230
              L   ++  F IN +  +  +  DL         L + ATD G PP  +S+
Sbjct: 952  YDLSVNFDDRFGINHTSGVLFLNKDLQNYPEKEYNLQIQATDYGTPPLSSSM 1003



 Score = 40.0 bits (92), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 54/199 (27%), Positives = 87/199 (43%), Gaps = 19/199 (9%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWLSNDYGERFSISR-QGDISLM 100
           F +  Y    LE++ V   + +VT     +     + Y ++ D    F I    G ++  
Sbjct: 503 FLQESYRAGLLESIQVGSFVKSVTATDADEGINADIVYSITGDEYGWFQIDNGTGLVTTR 562

Query: 101 QCLDYETEDSYRFTVYATDTL---MTTSATVNISVVNVNDWDPRFRYPQY-ELFLPHIPL 156
           + LD+ET      T+ A+D     M  +  + I + +VND  P F    Y E    + P 
Sbjct: 563 EKLDHETAAQVTLTITASDQGLEPMANTTILTIDIQDVNDEYPVFNQIAYSETVEENSPA 622

Query: 157 ADLTPGSVIGKVEAADGDKG--DRVTLSLRG-PYEKMFSIN-DSGHISI-VDLSALNTST 211
            DL       +V A D D G    VT +     Y  MFS++ +SG + I V L      +
Sbjct: 623 RDLI------QVLATDLDNGVNGDVTYTFSSDQYSGMFSLDPESGLLQITVPLDREEQDS 676

Query: 212 IQLVVVATDTGNPPRQASV 230
            +L ++A+D G+P  QA+ 
Sbjct: 677 YELEILASDGGSPSLQATA 695



 Score = 39.7 bits (91), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 34/108 (31%), Positives = 55/108 (50%), Gaps = 8/108 (7%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRDLR--VKYWLSND-YGERFSIS-RQGDISLM 100
           F++  YS +  EN P   ++  + T+    +   V Y  S+D Y   FS+    G + + 
Sbjct: 607 FNQIAYSETVEENSPARDLIQVLATDLDNGVNGDVTYTFSSDQYSGMFSLDPESGLLQIT 666

Query: 101 QCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYP 145
             LD E +DSY   + A+D     +  +ATV I+V++ ND  P+F YP
Sbjct: 667 VPLDREEQDSYELEILASDGGSPSLQATATVTIAVLDQNDNPPQF-YP 713



 Score = 38.9 bits (89), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 57/226 (25%), Positives = 95/226 (42%), Gaps = 14/226 (6%)

Query: 12   TLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNK 71
            TL VRA       + +  T+ ++ A  +     F ++ Y+ S +EN   N  ++ V  + 
Sbjct: 2258 TLTVRAQDQGYSTQVSSVTVTITVADVNDNAPVF-EDSYAPSIMENNLPNADIVQVRADD 2316

Query: 72   PR---DLRVKYWLSNDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDT---LMTT 124
                 +  + + L +DY   F+I S  G I + + LDYE ++ +   V A D+      T
Sbjct: 2317 ADSGVNGMINFRLESDYNGLFTIGSTSGLIQVTEVLDYEDQNEFELIVIAEDSGTPSHQT 2376

Query: 125  SATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR 184
              T+ ++V + ND DP F    Y   +     AD    + + +V A D D    +   L 
Sbjct: 2377 RTTMTLTVNDDNDHDPEFVSDFYRATVSEDASAD----TFVIQVTATDVDATAALRYRLN 2432

Query: 185  GPYEKMFSIND-SGHISIVDLSALNTSTIQLVVVATDTGNPPRQAS 229
                  F+I+   G I    L      +  L+ V  D G P R A+
Sbjct: 2433 SDIGSKFTIDPLGGRILTTGLLDREVQSSYLLTVTVDDG-PSRLAT 2477



 Score = 37.7 bits (86), Expect = 8.3,   Method: Compositional matrix adjust.
 Identities = 38/134 (28%), Positives = 61/134 (45%), Gaps = 10/134 (7%)

Query: 103 LDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADL 159
           LD ETED Y   + ATD   T  T    VN+++ +VND  P F    Y   +     A  
Sbjct: 239 LDRETEDFYILNISATDNSSTPRTGYLIVNVTITDVNDNSPIFTQTTYFATVNESSAA-- 296

Query: 160 TPGSVIGKVEAADGDKGDR--VTLSLRGPYEKMFSIN-DSGHISIVDLSALNTSTIQLVV 216
             G+ +  + A D D+G    +   L+      F+++ D+G I+++       +     V
Sbjct: 297 --GTSVVHLNATDIDQGSNGDIVYRLKNELTDNFALDPDTGWITLLRQLPYVANGYLFEV 354

Query: 217 VATDTGNPPRQASV 230
            ATD G+P + +S 
Sbjct: 355 TATDKGSPSQSSSA 368



 Score = 37.7 bits (86), Expect = 8.9,   Method: Compositional matrix adjust.
 Identities = 63/221 (28%), Positives = 102/221 (46%), Gaps = 24/221 (10%)

Query: 29   ATLIVSKAGTSLRELQFSKNEYSV----SALENLPVNYVLLTVTTNKPRDLRVKY-WLSN 83
            A +IV+  G +    QF++++Y       A +  PV  VL T   +   D  V Y ++  
Sbjct: 3311 AHVIVTLLGENEFYPQFTQHQYDFYVNEHATDGAPVGVVLAT-DDDLGDDGIVNYLFIGG 3369

Query: 84   DYGERFSIS-RQGDISLM---QCLDYETEDSYRFTVYATDTLMTTSATVNIS--VVNVND 137
               + F+++   G I++      LD ET D+   +V A +    T A ++ +  +++VND
Sbjct: 3370 SNLQGFNVNLESGQITVAYENGRLDRETADTVLLSVLAKNEGPITGADIDEAEVIIHVND 3429

Query: 138  WD--PRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDK---GDRVTLS-LRGPYEKMF 191
             +  P F   QY+  +    L    PGS +  V AAD D+     +   S LRG     F
Sbjct: 3430 GNDAPVFSSEQYQARV----LESEPPGSDVTVVTAADYDEIPSFRQFNYSILRGNEGDAF 3485

Query: 192  SIN-DSGHISIVDLSALNTSTIQ-LVVVATDTGNPPRQASV 230
             I+  +G I+   L    T ++  L V A DTGNPP+  + 
Sbjct: 3486 HIDARTGRITTASLLDRETLSVYFLTVAAIDTGNPPQTGTA 3526


>gi|332819253|ref|XP_003310324.1| PREDICTED: protocadherin-7 [Pan troglodytes]
 gi|410223658|gb|JAA09048.1| protocadherin 7 [Pan troglodytes]
 gi|410253296|gb|JAA14615.1| protocadherin 7 [Pan troglodytes]
 gi|410296940|gb|JAA27070.1| protocadherin 7 [Pan troglodytes]
 gi|410296946|gb|JAA27073.1| protocadherin 7 [Pan troglodytes]
          Length = 1255

 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 62/203 (30%), Positives = 92/203 (45%), Gaps = 21/203 (10%)

Query: 37  GTSLRELQFSKNEYSVSALENLPVNYV--LLTVTTNKPRDLRVKYWLSNDYGERFSIS-R 93
           G S+ E+ F +N        N+P   V  +L    +  ++  + Y L +     F+I   
Sbjct: 536 GQSVVEVYFPEN--------NIPGERVATVLATDADSGKNAEIAYSLDSSVMGIFAIDPD 587

Query: 94  QGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELF 150
            GDI +   LD E  D Y F V A D    ++  S TV + V + ND DP+F    +  +
Sbjct: 588 SGDILVNTVLDREQTDRYEFKVNAKDKGIPVLQGSTTVIVQVADKNDNDPKFMQDVFTFY 647

Query: 151 LPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSI-NDSGHI-SIVDLSAL 207
           +      +L P S +G V   D DKG    +SL       +FSI ND+G I S +     
Sbjct: 648 VKE----NLQPNSPVGMVTVMDADKGRNAEMSLYIEENNNIFSIENDTGTIYSTMSFDRE 703

Query: 208 NTSTIQLVVVATDTGNPPRQASV 230
           + +T    V A D G+PPR A+ 
Sbjct: 704 HQTTYTFRVKAVDGGDPPRSATA 726



 Score = 44.7 bits (104), Expect = 0.083,   Method: Compositional matrix adjust.
 Identities = 77/316 (24%), Positives = 136/316 (43%), Gaps = 46/316 (14%)

Query: 30  TLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVT---TNKPRDLRVKYWLSNDYG 86
           T+IV  A  +  + +F ++ ++    ENL  N  +  VT    +K R+  +  ++  +  
Sbjct: 624 TVIVQVADKNDNDPKFMQDVFTFYVKENLQPNSPVGMVTVMDADKGRNAEMSLYIEEN-N 682

Query: 87  ERFSISRQ-GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRF 142
             FSI    G I      D E + +Y F V A D      + +ATV++ V++ ND  P  
Sbjct: 683 NIFSIENDTGTIYSTMSFDREHQTTYTFRVKAVDGGDPPRSATATVSLFVMDENDNAPTV 742

Query: 143 RYPQ---YELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-D 195
             P+   Y L  P   +      +V+  V A D D G    L+   + G   K+F I+  
Sbjct: 743 TLPKNISYTLLPPSSNVR-----TVVATVLATDSDDGINADLNYSIVGGNPFKLFEIDPT 797

Query: 196 SGHISIV-DLSALNTSTIQLVVVATDTGNPPRQASVPAIMHFPEA------IVQQASSKL 248
           SG +S+V  L+  +    +LVV   D+G P +  +    +   E+      I  Q +  L
Sbjct: 798 SGVVSLVGKLTQKHYGLHRLVVQVNDSGQPSQSTTTLVHVFVNESVSNATVIDSQIARSL 857

Query: 249 NSGTSSTVL-------------IILGVVLIVLGFVIILLILYIHKNKHTKN-NGPPGSSH 294
           ++  +  +              I++GVV  ++  ++I+LI+ + +   +KN NG      
Sbjct: 858 HTPLTQDIAGDPSYEISKQRLSIVIGVVAGIMTVILIILIVVMARYCRSKNKNGYEAGKK 917

Query: 295 SKNDSFLSNVILPEKH 310
              D F      P++H
Sbjct: 918 DHEDFF-----TPQQH 928



 Score = 43.1 bits (100), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 41/150 (27%), Positives = 69/150 (46%), Gaps = 26/150 (17%)

Query: 93  RQGDISLMQCLDYETEDSYRFTVY---ATDTLMTTSATVNISVVNVNDWDPRFRYPQYEL 149
           +Q  + +   LD E  DSY  T+      D   ++ A + + + +VND  PRF    YE 
Sbjct: 256 KQPQLIVKGALDREQRDSYELTLRVRDGGDPPRSSQAILRVLITDVNDNSPRFEKSVYEA 315

Query: 150 FLPHIPLADLTPGSVIGKVEAADGDKG---------DRVTLSLRGPYEKMFSIND-SGHI 199
            L      +  PG+ I ++ AAD D G            T S+R    ++  +++ SG +
Sbjct: 316 DLAE----NSAPGTPILQLRAADLDVGVNGQIEYVFGAATESVR----RLLRLDETSGWL 367

Query: 200 SI---VDLSALNTSTIQLVVVATDTGNPPR 226
           S+   +D   +N   ++  V+A D G PP+
Sbjct: 368 SVLHRIDREEVN--QLRFTVMARDRGQPPK 395


>gi|403284522|ref|XP_003933617.1| PREDICTED: LOW QUALITY PROTEIN: cadherin EGF LAG seven-pass G-type
           receptor 2, partial [Saimiri boliviensis boliviensis]
          Length = 2897

 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 70/219 (31%), Positives = 102/219 (46%), Gaps = 22/219 (10%)

Query: 25  RYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWL 81
           R ALATL +    T+  +  F + EY  S  ENL V Y +LTV     + P +  + Y L
Sbjct: 244 RSALATLTILVTDTNDHDPVFEQQEYKESLRENLEVGYEVLTVRATDGDAPPNANILYRL 303

Query: 82  SNDYG----ERFSIS-RQGDISLMQCLDYETEDSYRFTVYATDT-----LMTTSATVNIS 131
               G    E F I  R G I     +D E  +SY+ TV A+D        +T+A V +S
Sbjct: 304 LEGPGGSPSEVFEIDPRSGVIRTRGPVDREEVESYQLTVEASDQGRDPGPRSTTAAVFLS 363

Query: 132 VVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYE 188
           V + ND  P+F   +Y + +      D+TPG+ + +V A+D DKG    +    + G   
Sbjct: 364 VEDDNDNAPQFSEKRYVVQV----REDVTPGAPVLRVTASDRDKGSNALVHYSIMSGNAR 419

Query: 189 KMFSIN-DSGHISIVD-LSALNTSTIQLVVVATDTGNPP 225
             F ++  +G + +V  L    T    L V A D G PP
Sbjct: 420 GQFYLDAQTGALDVVSPLDYETTKEYTLRVRAQDGGRPP 458



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 50/171 (29%), Positives = 80/171 (46%), Gaps = 15/171 (8%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGERFSIS---RQGDIS 98
           F    +  + LE++P+ Y++L V     +   + R++Y L+   G  F  +     G IS
Sbjct: 480 FVSTPFQATVLESVPLGYLVLHVQAIDADAGDNARLEYHLAG-VGHDFPFTINNGTGWIS 538

Query: 99  LMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIP 155
           +   LD E  D Y F V A D     +T SA+V+++V++VND +P F  P+Y + L    
Sbjct: 539 VAAELDREEVDFYSFGVEARDHGTPALTASASVSVTVLDVNDNNPTFTQPEYTVRLNE-- 596

Query: 156 LADLTPGSVIGKVEAADGDKGDRVTLSL-RGPYEKMFSINDSGHISIVDLS 205
             D   G+ +  V A D D    +T  +  G     FSI       +V L+
Sbjct: 597 --DAAVGTSVVTVSAVDRDAHSVITYQITSGNTRNRFSITSQSGGGLVSLA 645



 Score = 44.7 bits (104), Expect = 0.079,   Method: Compositional matrix adjust.
 Identities = 50/189 (26%), Positives = 86/189 (45%), Gaps = 14/189 (7%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRDLR--VKYWL-SNDYGERFSISRQ---GDIS 98
           F++ EY+V   E+  V   ++TV+    RD    + Y + S +   RFSI+ Q   G +S
Sbjct: 585 FTQPEYTVRLNEDAAVGTSVVTVSAVD-RDAHSVITYQITSGNTRNRFSITSQSGGGLVS 643

Query: 99  LMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLAD 158
           L   LDY+ E  Y   V A+D     +A + ++V + N   P F+   Y + +      D
Sbjct: 644 LALPLDYKLERQYVLAVTASDGTRQDTAQIVVNVTDANTHRPVFQSSHYTVNVNE----D 699

Query: 159 LTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSINDSGHISI-VDLSALNTSTIQLV 215
              G+ +  + A D D G+  R+T  +     +     D+G ++   +L   +  +  L 
Sbjct: 700 RPAGTTVVLISATDEDTGENARITYFMEDSIPQFRIDADTGAVTTQAELDYEDQVSYTLA 759

Query: 216 VVATDTGNP 224
           + A D G P
Sbjct: 760 ITARDNGIP 768



 Score = 44.3 bits (103), Expect = 0.092,   Method: Compositional matrix adjust.
 Identities = 40/149 (26%), Positives = 69/149 (46%), Gaps = 10/149 (6%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWL-SNDYGERFSIS-RQGDISL 99
            F ++E+ V   EN P+   +  VT   P +    ++ Y +   +  E F +    G+++ 
Sbjct: 896  FEQDEFDVFVEENSPIGLAVARVTATDPDEGTNAQIMYQIVEGNIPEVFQLDIFSGELTA 955

Query: 100  MQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPH--IPLA 157
            +  LDYE    Y   + AT   + + ATV++ +++ ND  P      +E+   +     +
Sbjct: 956  LVDLDYEDRPEYVLVIQATSAPLVSRATVHVRLLDRNDNPPVLG--NFEILFNNYVTNRS 1013

Query: 158  DLTPGSVIGKVEAADGDKGDRVTLSL-RG 185
               PG  IG+V A D D  D +T S  RG
Sbjct: 1014 SSFPGGAIGRVPAHDPDISDSLTYSFERG 1042


>gi|345798476|ref|XP_545961.3| PREDICTED: LOW QUALITY PROTEIN: protocadherin-7 [Canis lupus
           familiaris]
          Length = 1261

 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 62/203 (30%), Positives = 92/203 (45%), Gaps = 21/203 (10%)

Query: 37  GTSLRELQFSKNEYSVSALENLPVNYV--LLTVTTNKPRDLRVKYWLSNDYGERFSIS-R 93
           G S+ E+ F +N        N+P   V  +L    +  ++  + Y L +     F+I   
Sbjct: 550 GQSVVEVYFPEN--------NVPGERVATVLATDADSGKNAEIAYSLDSAVMGTFAIDPD 601

Query: 94  QGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELF 150
            GDI +   LD E  D Y F V A D    ++  S TV + V + ND DP+F    +  +
Sbjct: 602 SGDILVNTVLDREQTDRYEFKVNAKDKGIPVLQGSTTVIVQVADRNDNDPKFMQDVFTFY 661

Query: 151 LPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSI-NDSGHI-SIVDLSAL 207
           +      +L P S +G V   D DKG    +SL       +FSI ND+G I S +     
Sbjct: 662 VKE----NLQPNSPVGMVTVMDADKGRNAEMSLYIEENSNIFSIENDTGTIYSTMSFDRE 717

Query: 208 NTSTIQLVVVATDTGNPPRQASV 230
           + +T    V A D G+PPR A+ 
Sbjct: 718 HQTTYTFRVKAVDGGDPPRSATA 740



 Score = 44.7 bits (104), Expect = 0.083,   Method: Compositional matrix adjust.
 Identities = 77/316 (24%), Positives = 136/316 (43%), Gaps = 46/316 (14%)

Query: 30  TLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVT---TNKPRDLRVKYWLSNDYG 86
           T+IV  A  +  + +F ++ ++    ENL  N  +  VT    +K R+  +  ++  +  
Sbjct: 638 TVIVQVADRNDNDPKFMQDVFTFYVKENLQPNSPVGMVTVMDADKGRNAEMSLYIEEN-S 696

Query: 87  ERFSISRQ-GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRF 142
             FSI    G I      D E + +Y F V A D      + +ATV++ V++ ND  P  
Sbjct: 697 NIFSIENDTGTIYSTMSFDREHQTTYTFRVKAVDGGDPPRSATATVSLFVMDENDNAPTV 756

Query: 143 RYPQ---YELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-D 195
             P+   Y L  P   +      +V+  V A D D G    L+   + G   K+F I+  
Sbjct: 757 TLPRNISYTLLPPSSNVR-----TVVATVLATDSDDGINADLNYSIVGGNPFKLFEIDPT 811

Query: 196 SGHISIV-DLSALNTSTIQLVVVATDTGNPPRQASVPAIMHFPEA------IVQQASSKL 248
           SG +S+V  L+  +    +LVV   D+G P +  +    +   E+      I  Q +  L
Sbjct: 812 SGVVSLVGKLTQKHYGLHRLVVQVNDSGQPSQSTTTLVHVFVNESVSNATVIDSQIARSL 871

Query: 249 NSGTSSTVL-------------IILGVVLIVLGFVIILLILYIHKNKHTKN-NGPPGSSH 294
           ++  +  +              I++GVV  ++  ++I+LI+ + +   +KN NG      
Sbjct: 872 HTPLTQDIAGDPSYEISKQRLSIVIGVVAGIMTVILIILIVVMARYCRSKNKNGYEAGKK 931

Query: 295 SKNDSFLSNVILPEKH 310
              D F      P++H
Sbjct: 932 DHEDFF-----TPQQH 942



 Score = 43.1 bits (100), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 41/150 (27%), Positives = 69/150 (46%), Gaps = 26/150 (17%)

Query: 93  RQGDISLMQCLDYETEDSYRFTVY---ATDTLMTTSATVNISVVNVNDWDPRFRYPQYEL 149
           +Q  + +   LD E  DSY  T+      D   ++ A + + + +VND  PRF    YE 
Sbjct: 270 KQPQLIVKGALDREQRDSYELTLRVRDGGDPPRSSQAILRVLITDVNDNSPRFEKSVYEA 329

Query: 150 FLPHIPLADLTPGSVIGKVEAADGDKG---------DRVTLSLRGPYEKMFSIND-SGHI 199
            L      +  PG+ I ++ AAD D G            T S+R    ++  +++ SG +
Sbjct: 330 DLAE----NSAPGTPILQLRAADLDVGVNGQIEYVFGAATESVR----RLLRLDETSGWL 381

Query: 200 SI---VDLSALNTSTIQLVVVATDTGNPPR 226
           S+   +D   +N   ++  V+A D G PP+
Sbjct: 382 SVLHRIDREEVN--QLRFTVMARDRGQPPK 409


>gi|390460960|ref|XP_003732567.1| PREDICTED: protocadherin-7 isoform 2 [Callithrix jacchus]
          Length = 1255

 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 62/203 (30%), Positives = 92/203 (45%), Gaps = 21/203 (10%)

Query: 37  GTSLRELQFSKNEYSVSALENLPVNYV--LLTVTTNKPRDLRVKYWLSNDYGERFSIS-R 93
           G S+ E+ F +N        N+P   V  +L    +  ++  + Y L +     F+I   
Sbjct: 536 GQSVVEVYFPEN--------NIPGERVATVLATDADSGKNAEIAYSLDSSVMGIFAIDPD 587

Query: 94  QGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELF 150
            GDI +   LD E  D Y F V A D    ++  S TV + V + ND DP+F    +  +
Sbjct: 588 SGDILVNTVLDREQTDRYEFKVNAKDKGIPVLQGSTTVIVQVADKNDNDPKFMQDVFTFY 647

Query: 151 LPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSI-NDSGHI-SIVDLSAL 207
           +      +L P S +G V   D DKG    +SL       +FSI ND+G I S +     
Sbjct: 648 VKE----NLQPNSPVGMVTVMDADKGRNAEMSLYIEENNNIFSIENDTGTIYSTMSFDRE 703

Query: 208 NTSTIQLVVVATDTGNPPRQASV 230
           + +T    V A D G+PPR A+ 
Sbjct: 704 HQTTYTFRVKAVDGGDPPRSATA 726



 Score = 45.4 bits (106), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 79/318 (24%), Positives = 137/318 (43%), Gaps = 50/318 (15%)

Query: 30  TLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVT---TNKPRDLRVKYWLSNDYG 86
           T+IV  A  +  + +F ++ ++    ENL  N  +  VT    +K R+  +  ++  +  
Sbjct: 624 TVIVQVADKNDNDPKFMQDVFTFYVKENLQPNSPVGMVTVMDADKGRNAEMSLYIEEN-N 682

Query: 87  ERFSISRQ-GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRF 142
             FSI    G I      D E + +Y F V A D      + +ATV++ V++ ND  P  
Sbjct: 683 NIFSIENDTGTIYSTMSFDREHQTTYTFRVKAVDGGDPPRSATATVSLFVMDENDNAPTV 742

Query: 143 RYPQ---YELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-D 195
             P+   Y L  P   +      +V+  V A D D G    L+   + G   K+F I+  
Sbjct: 743 TLPRNISYTLLPPSSNVR-----TVVATVLATDSDDGINADLNYSIVGGNPFKLFEIDPT 797

Query: 196 SGHISIV-DLSALNTSTIQLVVVATDTGNPPRQASVPAIMHF--------PEAIVQQASS 246
           SG +S+V  L+  +    +LVV   D+G P +  S  A++H            I  Q + 
Sbjct: 798 SGVVSLVGKLTQKHYGLHRLVVQVNDSGQPSQ--STTALVHVFVNESVSNATVIDSQIAR 855

Query: 247 KLNSGTSSTVL-------------IILGVVLIVLGFVIILLILYIHKNKHTKN-NGPPGS 292
            L++  +  +              I++GVV  ++  ++I+LI+ + +   +KN NG    
Sbjct: 856 SLHTPLTQDIAGDPSYEISKQRLSIVIGVVAGIMTVILIILIVVMARYCRSKNKNGYEAG 915

Query: 293 SHSKNDSFLSNVILPEKH 310
                D F      P++H
Sbjct: 916 KKDHEDFF-----TPQQH 928



 Score = 43.1 bits (100), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 41/150 (27%), Positives = 69/150 (46%), Gaps = 26/150 (17%)

Query: 93  RQGDISLMQCLDYETEDSYRFTVY---ATDTLMTTSATVNISVVNVNDWDPRFRYPQYEL 149
           +Q  + +   LD E  DSY  T+      D   ++ A + + + +VND  PRF    YE 
Sbjct: 256 KQPQLIVKGALDREQRDSYELTLRVRDGGDPPRSSQAILRVLITDVNDNSPRFEKSVYEA 315

Query: 150 FLPHIPLADLTPGSVIGKVEAADGDKG---------DRVTLSLRGPYEKMFSIND-SGHI 199
            L      +  PG+ I ++ AAD D G            T S+R    ++  +++ SG +
Sbjct: 316 DLAE----NSAPGTPILQLRAADLDVGVNGQIEYVFGAATESVR----RLLRLDETSGWL 367

Query: 200 SI---VDLSALNTSTIQLVVVATDTGNPPR 226
           S+   +D   +N   ++  V+A D G PP+
Sbjct: 368 SVLHRIDREEVN--QLRFTVMARDRGQPPK 395


>gi|363733446|ref|XP_420617.3| PREDICTED: protocadherin Fat 4 [Gallus gallus]
          Length = 5019

 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 77/270 (28%), Positives = 118/270 (43%), Gaps = 44/270 (16%)

Query: 2    INEDD-----FLQPITLV---VRAIQYDNQDRYALATLIVSKAGTSLRELQ--------- 44
            ++EDD     FL P+T V    RA+ Y+ Q  Y L T+     G     ++         
Sbjct: 1914 VSEDDEEGMFFLNPVTGVFNLTRALDYEAQQYYIL-TIRAEDGGGQFATIRVYFNILDIN 1972

Query: 45   -----FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWL-SNDYGERFSISRQG 95
                 FS   YS S +ENL     +L  +     D    ++ + + S D    F I   G
Sbjct: 1973 DNPPVFSMTSYSTSLMENLAPGSAILNFSVTDADDGSNSQLSFSIASGDSMGHFGIDNSG 2032

Query: 96   DISLMQCLDYETEDSYRFTVYATD------TLMTTSATVNISVVNVNDWDPRFRYPQYEL 149
             +S+ Q LD E++  Y   V   D      +  T++A V+I +++VND  P F  P+   
Sbjct: 2033 VLSIQQPLDRESQSFYSLVVQVHDMAPLPASRYTSTAQVSIILLDVNDSPPSFISPK--- 2089

Query: 150  FLPHIPLADLTP-GSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIND-SGHISIV-DL 204
             L +IP  + TP  +++ K +A D D G    +  SL  P    FSI    G + ++ +L
Sbjct: 2090 -LTYIP--ENTPIDTIVFKAQATDPDSGPNSYIEYSLLRPLGNKFSIGTIDGEVRLIGEL 2146

Query: 205  SALNTSTIQLVVVATDTGNPPRQASVPAIM 234
                 S   L VVATD G P   +S   ++
Sbjct: 2147 DREAVSNYTLTVVATDKGQPSLSSSTDVVV 2176



 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 70/243 (28%), Positives = 106/243 (43%), Gaps = 40/243 (16%)

Query: 15   VRAIQYDNQDRYALATLIVSKAGTSLREL----------------QFSKNEYSVSALENL 58
            VR +  +   RY L T+  S  GT L+                  +FS+  +S S  EN 
Sbjct: 2762 VRPLDREKLSRYTL-TIKASDKGTPLQSTTVKVIINVLDENDNAPRFSQ-IFSASVPENA 2819

Query: 59   PVNYVLLTVTTNKPRDL---RVKYWLSNDYGERFSIS-RQGDISLMQCLDYETEDSYRFT 114
            P+ + +  VTT+   D+    +  +   D    F I+   GDI++ + L+ E  D YR  
Sbjct: 2820 PLGFTVTRVTTSD-EDIGMNAISRYSIRDTSLPFVINPSTGDITVSRLLNREDTDRYRIR 2878

Query: 115  VYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGD 174
            V A D+  T S  V + V +VND  PRF  P Y L  P +P   L     + +V A D D
Sbjct: 2879 VSAHDSGWTVSTDVTVFVTDVNDNAPRFTKPSYYLECPELPGIGLK----VTQVSATDPD 2934

Query: 175  KGD--RVTLSLRGPYEKMFSIN-DSGHI---------SIVDLSALNTSTIQLVVVATDTG 222
            +G    V   ++   E  F IN  +G I         +    S +N +    +V ++D G
Sbjct: 2935 EGSNGHVFYFIKSQSE-FFRINATTGEIFNKQYLRYQNSSGSSNVNINRHSFIVTSSDRG 2993

Query: 223  NPP 225
            +PP
Sbjct: 2994 SPP 2996



 Score = 57.8 bits (138), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 51/186 (27%), Positives = 92/186 (49%), Gaps = 10/186 (5%)

Query: 45   FSKNEYSVSALENLPVNYVLLTV-TTNKPRDLRVKYWLS-NDYGERFSISR-QGDISLMQ 101
            FS+  Y     EN+ + Y + TV  +    +  + Y ++  D    F+I++  G I+   
Sbjct: 827  FSQGMYGFVVFENVALGYHVGTVFASTMDLNTNISYLITTGDQRGMFAINKVTGQITTAS 886

Query: 102  CLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTP 161
             +D E +  Y+  V A+   +T    VNI+V ++ND  P F +    + +    + +   
Sbjct: 887  IIDREEQAFYQLKVVASGGAVTGDTIVNITVKDLNDNSPHFIHAVESVNV----VENWKA 942

Query: 162  GSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIND-SGHISIVDLSALNTSTIQLVVVA 218
            G  I + +A D D+G    V  SL+   + +FSIN+ +G IS++    +N  T Q+ ++A
Sbjct: 943  GHTIFQAKALDPDEGVNGMVLYSLKQNPKGLFSINEQTGAISLIGQLDINAGTYQVEILA 1002

Query: 219  TDTGNP 224
            +D G P
Sbjct: 1003 SDMGVP 1008



 Score = 55.1 bits (131), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 42/82 (51%), Gaps = 4/82 (4%)

Query: 95   GDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHI 154
            GD+   + LD E    Y   V A D L ++   +NI+V +VND  P+F  P Y   +P  
Sbjct: 1828 GDLIATKRLDRERRSKYSLLVRADDGLQSSDMRINITVSDVNDHIPKFSKPVYSFDIPE- 1886

Query: 155  PLADLTPGSVIGKVEAADGDKG 176
               D TPGS++  + A D D G
Sbjct: 1887 ---DATPGSLVAAILATDDDSG 1905



 Score = 51.6 bits (122), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 57/192 (29%), Positives = 94/192 (48%), Gaps = 15/192 (7%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWL-SNDYGERFSI-SRQGDISL 99
            F++  Y V   EN      L+ V     ++  + +V+Y + S D G +F I S  G I++
Sbjct: 2188 FAQKLYRVELEENTLTGTDLIQVLATDGDEGTNGQVRYSIVSGDTGNQFRIDSVTGVITV 2247

Query: 100  MQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
             + LD E + SY  +V ++D   +  T + TVNI + +VND+ P F    Y +   ++P 
Sbjct: 2248 AKPLDREKKPSYMLSVQSSDRGSSPRTDTTTVNIVLKDVNDYVPTFELSPYNV---NVPE 2304

Query: 157  ADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSINDSGHISIVD-LSALNTSTI 212
               T   VI +V A D D+G    L+   + G  E  F ++ SG + +V  L        
Sbjct: 2305 NLETLPKVILQVVARDDDQGLNSKLTYVLVSGNEEGAFILSASGELRLVQSLDRERKEQY 2364

Query: 213  QLVVVATDTGNP 224
             L++ A D+G+P
Sbjct: 2365 VLLITAADSGSP 2376



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 45/158 (28%), Positives = 83/158 (52%), Gaps = 13/158 (8%)

Query: 87   ERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRF 142
            ++F+I S  G ++L+  LD+E   SY   + A D+    ++++ T++I V++ ND  P F
Sbjct: 1290 KQFAIDSSTGQVTLVGKLDHEATASYSLVIQAVDSGAVSLSSTCTLSIDVLDENDNSPSF 1349

Query: 143  RYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTL--SLRGPY-EKMFSIN-DSGH 198
              P+  L +    L ++  G ++  V A D D GD   L  S+ G      FSI+ ++G 
Sbjct: 1350 --PKSTLSVDV--LENMRVGELVSSVTATDSDSGDNADLHYSITGTNNHGTFSISPNTGS 1405

Query: 199  ISIVDLSALNTSTI-QLVVVATDTGNPPRQASVPAIMH 235
            I +       T ++ +L + A D G PPR +++  +++
Sbjct: 1406 IFLAKKLDFETQSLYKLNITAKDQGRPPRSSTMSVVIY 1443



 Score = 48.5 bits (114), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 52/183 (28%), Positives = 87/183 (47%), Gaps = 16/183 (8%)

Query: 56   ENLPVNYVLLTVTTNKPR---DLRVKYWLSNDYGERFSISR-QGDISLMQCLDYETEDSY 111
            EN P++ ++       P    +  ++Y L    G +FSI    G++ L+  LD E   +Y
Sbjct: 2095 ENTPIDTIVFKAQATDPDSGPNSYIEYSLLRPLGNKFSIGTIDGEVRLIGELDREAVSNY 2154

Query: 112  RFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKV 168
              TV ATD     +++S  V + V+++ND +P F    Y + L    L     G+ + +V
Sbjct: 2155 TLTVVATDKGQPSLSSSTDVVVIVLDINDNNPLFAQKLYRVELEENTLT----GTDLIQV 2210

Query: 169  EAADGDKG--DRVTLSL-RGPYEKMFSIND-SGHISIVD-LSALNTSTIQLVVVATDTGN 223
             A DGD+G   +V  S+  G     F I+  +G I++   L      +  L V ++D G+
Sbjct: 2211 LATDGDEGTNGQVRYSIVSGDTGNQFRIDSVTGVITVAKPLDREKKPSYMLSVQSSDRGS 2270

Query: 224  PPR 226
             PR
Sbjct: 2271 SPR 2273



 Score = 46.2 bits (108), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 51/191 (26%), Positives = 85/191 (44%), Gaps = 16/191 (8%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPR---DLRVKYWLSNDYGERFSIS-RQGDISLM 100
            FS  +Y  + LEN P    ++ +  +      +  + Y + +   + F I    G I+  
Sbjct: 3228 FSPEDYFPNVLENAPSGTTVIRLNASDADSGPNAVIAYAIQSSDSDLFVIDPNTGTITTQ 3287

Query: 101  QCLDYETEDSYRFTVYA---TDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLA 157
              LDYET+ SY  T+ A    D    + A+VNI +   N++ PRF    Y   +      
Sbjct: 3288 GFLDYETKQSYHLTIKAFNVPDEERCSFASVNIQLEGTNEYVPRFVSKLYYFEVSEA--- 3344

Query: 158  DLTPGSVIGKVEAAD---GDKGDRVTLSLRGPYEKMFSIND-SGHISIVD-LSALNTSTI 212
              + G+++G+V A+D   G  G+   L      +K F I++ SG I +   L       I
Sbjct: 3345 -ASEGTIVGEVFASDRDLGTDGEVHYLIFGNSRKKGFQIDERSGQIYVSGPLDREKEERI 3403

Query: 213  QLVVVATDTGN 223
             L V+A + G+
Sbjct: 3404 SLKVLAKNFGS 3414



 Score = 45.8 bits (107), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 59/226 (26%), Positives = 90/226 (39%), Gaps = 35/226 (15%)

Query: 44   QFSKNEYSVSALENL-PVNYVLLTVTTNKPRDL--RVKYWLSND--YGERFSISRQGDIS 98
            +FSK  YS    E+  P + V   + T+    +   + Y +S D   G  F     G  +
Sbjct: 1874 KFSKPVYSFDIPEDATPGSLVAAILATDDDSGINGEITYTVSEDDEEGMFFLNPVTGVFN 1933

Query: 99   LMQCLDYETEDSYRFTVYATDTL-MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLA 157
            L + LDYE +  Y  T+ A D      +  V  +++++ND  P F    Y   L    + 
Sbjct: 1934 LTRALDYEAQQYYILTIRAEDGGGQFATIRVYFNILDINDNPPVFSMTSYSTSL----ME 1989

Query: 158  DLTPGSVIGKVEAADGDKGDRVTLSLR---GPYEKMFSINDSGHISIV------------ 202
            +L PGS I      D D G    LS     G     F I++SG +SI             
Sbjct: 1990 NLAPGSAILNFSVTDADDGSNSQLSFSIASGDSMGHFGIDNSGVLSIQQPLDRESQSFYS 2049

Query: 203  ------DLSALN----TSTIQLVVVATDTGNPPRQASVPAIMHFPE 238
                  D++ L     TST Q+ ++  D  + P     P + + PE
Sbjct: 2050 LVVQVHDMAPLPASRYTSTAQVSIILLDVNDSPPSFISPKLTYIPE 2095



 Score = 45.8 bits (107), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 64/224 (28%), Positives = 99/224 (44%), Gaps = 37/224 (16%)

Query: 45   FSKNEYSVSALENLPV--NYVLLTVTTNKPRDLRVK--YWL--SNDYGERFSISRQGDIS 98
            F  + Y+V+  ENL      +L  V  +  + L  K  Y L   N+ G  F +S  G++ 
Sbjct: 2293 FELSPYNVNVPENLETLPKVILQVVARDDDQGLNSKLTYVLVSGNEEGA-FILSASGELR 2351

Query: 99   LMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIP 155
            L+Q LD E ++ Y   + A D+    +T + T+ ++V +VND  P F +  Y   +P   
Sbjct: 2352 LVQSLDRERKEQYVLLITAADSGSPALTGTGTITVTVDDVNDNVPTFAFNMYSATVPE-- 2409

Query: 156  LADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDS-GHI---SIVDLS------ 205
              D   G+ I  V ++D D      + L G     F+IN S G I   +++D        
Sbjct: 2410 --DAPTGTDILLVNSSDADASRNAVIRLTGG-NSQFTINPSTGQIITSALLDRETRENYT 2466

Query: 206  ------------ALNTSTIQLVVVATDTGNPPRQASVPAIMHFP 237
                        AL++ST  LV VA    NPP+    P + H P
Sbjct: 2467 LIVVASDGGYPRALSSSTSVLVAVADVNDNPPKFQHHPYVTHVP 2510



 Score = 44.3 bits (103), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 41/142 (28%), Positives = 72/142 (50%), Gaps = 14/142 (9%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLR----VKYWLS--NDYGERFSISRQGDI 97
            +FS++  SV+  E+  V  V+ TV+  + RD      ++Y +S  N+ G     +  G +
Sbjct: 3122 EFSQSHMSVTIPESHSVGAVIRTVSA-RDRDAAMNGLIRYNISSGNEAGNFAINTTTGTL 3180

Query: 98   SLMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHI 154
            +L + LD+E    +   V ATD      T   +V I+V++VND  P F     E + P++
Sbjct: 3181 TLAKPLDFELCQKHELIVTATDGGWVSRTGFCSVTINVIDVNDNSPTF---SPEDYFPNV 3237

Query: 155  PLADLTPGSVIGKVEAADGDKG 176
             L +   G+ + ++ A+D D G
Sbjct: 3238 -LENAPSGTTVIRLNASDADSG 3258



 Score = 42.7 bits (99), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 50/175 (28%), Positives = 82/175 (46%), Gaps = 20/175 (11%)

Query: 12   TLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVT--- 68
            +LV++A+        +  TL +     +     F K+  SV  LEN+ V  ++ +VT   
Sbjct: 1316 SLVIQAVDSGAVSLSSTCTLSIDVLDENDNSPSFPKSTLSVDVLENMRVGELVSSVTATD 1375

Query: 69   --TNKPRDLRVKYWLSNDYGERFSIS-RQGDISLMQCLDYETEDSYRFTVYATDTL---M 122
              +    DL      +N++G  FSIS   G I L + LD+ET+  Y+  + A D      
Sbjct: 1376 SDSGDNADLHYSITGTNNHGT-FSISPNTGSIFLAKKLDFETQSLYKLNITAKDQGRPPR 1434

Query: 123  TTSATVNISVVNVNDWDPRFRYPQYELF---LPHIPLADLTPGSVIGKVEAADGD 174
            +++ +V I V + ND  P F  P  ++F   + +IP+     GS +  V A D D
Sbjct: 1435 SSTMSVVIYVRDFNDNPPNF--PAGDIFKSIIENIPV-----GSSVISVTANDSD 1482



 Score = 42.0 bits (97), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 64/245 (26%), Positives = 103/245 (42%), Gaps = 43/245 (17%)

Query: 11  ITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNE-YSVSALENLPVNYVLLTVTT 69
           + L + A     Q +++ A L+V+    +  + +FS+ E Y VS  EN P    LL ++ 
Sbjct: 571 VVLNISARDQGVQPKFSYAQLVVTILDINDNKPRFSQPEGYQVSLAENSPSGTELLVLSA 630

Query: 70  NKPRDLRVKYWLSNDYGERFSIS----------------RQ--------GDISLMQCLDY 105
                  V   L ++   RFS+                 RQ        G +S +  LD 
Sbjct: 631 -------VDGDLGDNGTIRFSLQEAEPAVVAVGPSSVTPRQVFRLDPVSGKLSTISQLDR 683

Query: 106 ETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPG 162
           E +  +   V ATD     +++ A VN+S+++VND  P F   QY     HI   +   G
Sbjct: 684 EEQAHFSLQVLATDLGSPPLSSVARVNVSLLDVNDNSPVFYPVQY---FAHI-QENEPAG 739

Query: 163 SVIGKVEAADGDKGDRVTL--SLRGPYEKMFSINDSGHI--SIVDLSALNTSTIQLVVVA 218
           + +  V A D D G   T+  S+       F ++    I  + + L     +  QL +VA
Sbjct: 740 TYVTTVSATDPDMGPNGTVKYSISAGDTSRFQVHGKTGIITTKIALDREEKTAYQLQIVA 799

Query: 219 TDTGN 223
           TD G+
Sbjct: 800 TDGGH 804



 Score = 38.5 bits (88), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 43/153 (28%), Positives = 71/153 (46%), Gaps = 27/153 (17%)

Query: 95  GDISLMQCLDYETEDSYRFTVYATDTLMT---TSATVNISVVNVNDWDPRFRYPQ-YELF 150
           G  S+   LD ET       + A D  +    + A + ++++++ND  PRF  P+ Y+  
Sbjct: 555 GGASVTSGLDRETTSQVVLNISARDQGVQPKFSYAQLVVTILDINDNKPRFSQPEGYQ-- 612

Query: 151 LPHIPLADLTP-GSVIGKVEAADGDKGDRVTLSLR-----------GPY----EKMFSIN 194
              + LA+ +P G+ +  + A DGD GD  T+              GP      ++F ++
Sbjct: 613 ---VSLAENSPSGTELLVLSAVDGDLGDNGTIRFSLQEAEPAVVAVGPSSVTPRQVFRLD 669

Query: 195 D-SGHIS-IVDLSALNTSTIQLVVVATDTGNPP 225
             SG +S I  L     +   L V+ATD G+PP
Sbjct: 670 PVSGKLSTISQLDREEQAHFSLQVLATDLGSPP 702



 Score = 38.1 bits (87), Expect = 6.4,   Method: Compositional matrix adjust.
 Identities = 37/121 (30%), Positives = 63/121 (52%), Gaps = 13/121 (10%)

Query: 111  YRFTVYATD----TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIG 166
            +  TV ATD      +   ATV I + ++ND  P+F    Y+  +  +  A+LT    + 
Sbjct: 1209 FSLTVIATDQGLPKPLKDQATVQIYMKDINDNAPKFLKDLYQATISEL-AANLTQ---VL 1264

Query: 167  KVEAADGDKGDRVTLS---LRGPYEKMFSINDS-GHISIV-DLSALNTSTIQLVVVATDT 221
            +V A+D D+G    +    ++G  EK F+I+ S G +++V  L    T++  LV+ A D+
Sbjct: 1265 RVSASDVDEGTNGLIHYSVIKGNEEKQFAIDSSTGQVTLVGKLDHEATASYSLVIQAVDS 1324

Query: 222  G 222
            G
Sbjct: 1325 G 1325



 Score = 38.1 bits (87), Expect = 6.9,   Method: Compositional matrix adjust.
 Identities = 50/182 (27%), Positives = 81/182 (44%), Gaps = 21/182 (11%)

Query: 95  GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPR--FRY-PQYE 148
           G I + + LDYE    Y  TV ATD     ++  A   I +++VND +PR  FRY P   
Sbjct: 297 GVIRIRERLDYELCQQYSLTVQATDRGVPALSGRAEALIRLLDVNDNEPRVKFRYFPATS 356

Query: 149 LFLPHIPLADLTPGSVIGKVEAADGDK----GDRVTLSLRGPYEKMFSINDSG--HISIV 202
            F      A   PG+V+  +  +D D     G+     L G  ++ F ++ S   ++S++
Sbjct: 357 RFASVDENA--APGTVVALLTVSDADSPAANGNISVSILAGNEQRHFEVHSSKVPNLSLI 414

Query: 203 DL-SALNTSTIQL----VVVATDTGNPPRQASVPAIMHFPEAIVQQASSKLNSGTSSTVL 257
            + +AL+   I      V VA + G  P     P     P+ +     S+  S  +S V+
Sbjct: 415 KVAAALDRERIPAYNLTVAVADNYGASPPPPGFPTSSLSPDGVAATPVSR--SSVASLVI 472

Query: 258 II 259
            +
Sbjct: 473 FV 474


>gi|114593506|ref|XP_517139.2| PREDICTED: protocadherin-7 isoform 4 [Pan troglodytes]
 gi|410223664|gb|JAA09051.1| protocadherin 7 [Pan troglodytes]
 gi|410253300|gb|JAA14617.1| protocadherin 7 [Pan troglodytes]
 gi|410296944|gb|JAA27072.1| protocadherin 7 [Pan troglodytes]
          Length = 1247

 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 62/203 (30%), Positives = 92/203 (45%), Gaps = 21/203 (10%)

Query: 37  GTSLRELQFSKNEYSVSALENLPVNYV--LLTVTTNKPRDLRVKYWLSNDYGERFSIS-R 93
           G S+ E+ F +N        N+P   V  +L    +  ++  + Y L +     F+I   
Sbjct: 536 GQSVVEVYFPEN--------NIPGERVATVLATDADSGKNAEIAYSLDSSVMGIFAIDPD 587

Query: 94  QGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELF 150
            GDI +   LD E  D Y F V A D    ++  S TV + V + ND DP+F    +  +
Sbjct: 588 SGDILVNTVLDREQTDRYEFKVNAKDKGIPVLQGSTTVIVQVADKNDNDPKFMQDVFTFY 647

Query: 151 LPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSI-NDSGHI-SIVDLSAL 207
           +      +L P S +G V   D DKG    +SL       +FSI ND+G I S +     
Sbjct: 648 VKE----NLQPNSPVGMVTVMDADKGRNAEMSLYIEENNNIFSIENDTGTIYSTMSFDRE 703

Query: 208 NTSTIQLVVVATDTGNPPRQASV 230
           + +T    V A D G+PPR A+ 
Sbjct: 704 HQTTYTFRVKAVDGGDPPRSATA 726



 Score = 44.7 bits (104), Expect = 0.087,   Method: Compositional matrix adjust.
 Identities = 77/316 (24%), Positives = 136/316 (43%), Gaps = 46/316 (14%)

Query: 30  TLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVT---TNKPRDLRVKYWLSNDYG 86
           T+IV  A  +  + +F ++ ++    ENL  N  +  VT    +K R+  +  ++  +  
Sbjct: 624 TVIVQVADKNDNDPKFMQDVFTFYVKENLQPNSPVGMVTVMDADKGRNAEMSLYIEEN-N 682

Query: 87  ERFSISRQ-GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRF 142
             FSI    G I      D E + +Y F V A D      + +ATV++ V++ ND  P  
Sbjct: 683 NIFSIENDTGTIYSTMSFDREHQTTYTFRVKAVDGGDPPRSATATVSLFVMDENDNAPTV 742

Query: 143 RYPQ---YELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-D 195
             P+   Y L  P   +      +V+  V A D D G    L+   + G   K+F I+  
Sbjct: 743 TLPKNISYTLLPPSSNVR-----TVVATVLATDSDDGINADLNYSIVGGNPFKLFEIDPT 797

Query: 196 SGHISIV-DLSALNTSTIQLVVVATDTGNPPRQASVPAIMHFPEA------IVQQASSKL 248
           SG +S+V  L+  +    +LVV   D+G P +  +    +   E+      I  Q +  L
Sbjct: 798 SGVVSLVGKLTQKHYGLHRLVVQVNDSGQPSQSTTTLVHVFVNESVSNATVIDSQIARSL 857

Query: 249 NSGTSSTVL-------------IILGVVLIVLGFVIILLILYIHKNKHTKN-NGPPGSSH 294
           ++  +  +              I++GVV  ++  ++I+LI+ + +   +KN NG      
Sbjct: 858 HTPLTQDIAGDPSYEISKQRLSIVIGVVAGIMTVILIILIVVMARYCRSKNKNGYEAGKK 917

Query: 295 SKNDSFLSNVILPEKH 310
              D F      P++H
Sbjct: 918 DHEDFF-----TPQQH 928



 Score = 43.1 bits (100), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 41/150 (27%), Positives = 69/150 (46%), Gaps = 26/150 (17%)

Query: 93  RQGDISLMQCLDYETEDSYRFTVY---ATDTLMTTSATVNISVVNVNDWDPRFRYPQYEL 149
           +Q  + +   LD E  DSY  T+      D   ++ A + + + +VND  PRF    YE 
Sbjct: 256 KQPQLIVKGALDREQRDSYELTLRVRDGGDPPRSSQAILRVLITDVNDNSPRFEKSVYEA 315

Query: 150 FLPHIPLADLTPGSVIGKVEAADGDKG---------DRVTLSLRGPYEKMFSIND-SGHI 199
            L      +  PG+ I ++ AAD D G            T S+R    ++  +++ SG +
Sbjct: 316 DLAE----NSAPGTPILQLRAADLDVGVNGQIEYVFGAATESVR----RLLRLDETSGWL 367

Query: 200 SI---VDLSALNTSTIQLVVVATDTGNPPR 226
           S+   +D   +N   ++  V+A D G PP+
Sbjct: 368 SVLHRIDREEVN--QLRFTVMARDRGQPPK 395


>gi|62997558|gb|AAY24693.1| protocadherin 15 isoform C [Mus musculus]
          Length = 1363

 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 69/226 (30%), Positives = 111/226 (49%), Gaps = 16/226 (7%)

Query: 13  LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKP 72
           LVV   QYD+     + T ++     S    +F +  YS+   E + +  +LL +     
Sbjct: 21  LVVSWGQYDDHSICTVYTEVLPPNNQS--PPRFPQLMYSLEVSEAMRIGAILLNLQATDR 78

Query: 73  RDLRVKYWLSNDYGER-FSISRQ-GDISLMQCLDYETEDSYRFTVYATDTL--MTTSATV 128
               + Y + N   +R F++S   G +SL + LD E+ D Y   V A+D     T++ATV
Sbjct: 79  EGDPITYAIENGDPQRVFNLSETTGILSLGKALDRESTDRYILIVTASDGRPDGTSTATV 138

Query: 129 NISVVNVNDWDPRFRYPQYELFLP-HIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRG 185
           NI V +VND  P F     + +LP ++ + +    + +G+V A D D G   +V  SL G
Sbjct: 139 NIVVTDVNDNAPVF-----DPYLPRNLSVVEEEANAFVGQVRATDPDAGINGQVHYSL-G 192

Query: 186 PYEKMFSINDSGHI-SIVDLSALNTSTIQLVVVATDTGNPPRQASV 230
            +  +F I  +G I + V L+       +LVVVATD    PR +++
Sbjct: 193 NFNNLFRITSNGSIYTAVKLNREARDHYELVVVATDGAVHPRHSTL 238



 Score = 48.5 bits (114), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 63/201 (31%), Positives = 93/201 (46%), Gaps = 26/201 (12%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRDL--RVKYWL-SNDYGERFSISR-QGDISLM 100
           F+ + Y+V   ENLP     L +   K  DL   V Y + S +    F++    G++SL+
Sbjct: 254 FTNSTYTVVVEENLPAGTSFLQIEA-KDVDLGANVSYRIRSPEVKHLFALHPFTGELSLL 312

Query: 101 QCLDYET----EDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
           + LDYE     E S  F   A D   T+    ATV + V ++ND+ P F    Y+  +  
Sbjct: 313 RSLDYEAFPDQEASITFLAEAFDIYGTMPPGIATVTVIVKDMNDYPPVFSKRIYKGMV-- 370

Query: 154 IPLADLTPGSVIGKVEAADGDK----GDRVTL---SLRGPY-EKMFSIN-DSGHI-SIVD 203
               D   G+ I  V A D D       RV      ++ PY   +F +  DSG + + V+
Sbjct: 371 --APDAVKGTPITTVYAEDADPPGMPASRVRYRVDDVQFPYPASIFDVEEDSGRVVTRVN 428

Query: 204 LSALNTSTIQLVVVATDTGNP 224
           L+   T+  +LVVVA D G P
Sbjct: 429 LNEEPTTIFKLVVVAFDDGEP 449


>gi|410957824|ref|XP_003985524.1| PREDICTED: protocadherin-7 isoform 4 [Felis catus]
          Length = 1244

 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 62/203 (30%), Positives = 92/203 (45%), Gaps = 21/203 (10%)

Query: 37  GTSLRELQFSKNEYSVSALENLPVNYV--LLTVTTNKPRDLRVKYWLSNDYGERFSIS-R 93
           G S+ E+ F +N        N+P   V  +L    +  ++  + Y L +     F+I   
Sbjct: 533 GQSVVEVYFPEN--------NIPGERVATVLATDADSGKNAEIAYSLDSSVMGIFAIDPD 584

Query: 94  QGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELF 150
            GDI +   LD E  D Y F V A D    ++  S TV + V + ND DP+F    +  +
Sbjct: 585 SGDILVNTVLDREQTDRYEFKVNAKDKGIPVLQGSTTVIVQVADKNDNDPKFMQDVFTFY 644

Query: 151 LPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSI-NDSGHI-SIVDLSAL 207
           +      +L P S +G V   D DKG    +SL       +FSI ND+G I S +     
Sbjct: 645 VKE----NLQPNSPVGMVTVMDADKGRNAEMSLYIEENSNIFSIENDTGTIYSTMSFDRE 700

Query: 208 NTSTIQLVVVATDTGNPPRQASV 230
           + +T    V A D G+PPR A+ 
Sbjct: 701 HQTTYTFRVKAVDGGDPPRSATA 723



 Score = 43.1 bits (100), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 41/150 (27%), Positives = 69/150 (46%), Gaps = 26/150 (17%)

Query: 93  RQGDISLMQCLDYETEDSYRFTVY---ATDTLMTTSATVNISVVNVNDWDPRFRYPQYEL 149
           +Q  + +   LD E  DSY  T+      D   ++ A + + + +VND  PRF    YE 
Sbjct: 253 KQPQLIVKGALDREQRDSYELTLRVRDGGDPPRSSQAILRVLITDVNDNSPRFEKSVYEA 312

Query: 150 FLPHIPLADLTPGSVIGKVEAADGDKG---------DRVTLSLRGPYEKMFSIND-SGHI 199
            L      +  PG+ I ++ AAD D G            T S+R    ++  +++ SG +
Sbjct: 313 DLAE----NSAPGTPILQLRAADLDVGVNGQIEYVFGAATESVR----RLLRLDETSGWL 364

Query: 200 SI---VDLSALNTSTIQLVVVATDTGNPPR 226
           S+   +D   +N   ++  V+A D G PP+
Sbjct: 365 SVLHRIDREEVN--QLRFTVMARDRGQPPK 392


>gi|397473819|ref|XP_003808397.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 2 [Pan
           paniscus]
          Length = 3150

 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 70/219 (31%), Positives = 102/219 (46%), Gaps = 22/219 (10%)

Query: 25  RYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWL 81
           R ALATL +    T+  +  F + EY  S  ENL V Y +LTV     + P +  + Y L
Sbjct: 498 RSALATLTILVTDTNDHDPVFEQQEYKESLRENLEVGYEVLTVRATDGDAPPNANILYRL 557

Query: 82  SNDYG----ERFSIS-RQGDISLMQCLDYETEDSYRFTVYATDT-----LMTTSATVNIS 131
               G    E F I  R G I     +D E  +SY+ TV A+D        +T+A V +S
Sbjct: 558 LEGSGGSPSEVFEIDPRSGVIRTRGPVDREEVESYQLTVEASDQGRDPGPRSTTAAVFLS 617

Query: 132 VVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYE 188
           V + ND  P+F   +Y + +      D+TPG+ + +V A+D DKG    +    + G   
Sbjct: 618 VEDDNDNAPQFSEKRYVVQV----REDVTPGAPVLRVTASDRDKGSNALVHYSIMSGNAR 673

Query: 189 KMFSIN-DSGHISIVD-LSALNTSTIQLVVVATDTGNPP 225
             F ++  +G + +V  L    T    L V A D G PP
Sbjct: 674 GQFYLDAQTGALDVVSPLDYETTKEYTLRVRAQDGGRPP 712



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 50/171 (29%), Positives = 80/171 (46%), Gaps = 15/171 (8%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGERFSIS---RQGDIS 98
           F    +  + LE++P+ Y++L V     +   + R++Y L+   G  F  +     G IS
Sbjct: 734 FVSTPFQATVLESVPLGYLVLHVQAIDADAGDNARLEYRLAG-VGHDFPFTINNGTGWIS 792

Query: 99  LMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIP 155
           +   LD E  D Y F V A D     +T SA+V+++V++VND +P F  P+Y + L    
Sbjct: 793 VAAELDREEVDFYSFGVEARDHGTPALTASASVSVTVLDVNDNNPTFTQPEYTVRLNE-- 850

Query: 156 LADLTPGSVIGKVEAADGDKGDRVTLSL-RGPYEKMFSINDSGHISIVDLS 205
             D   G+ +  V A D D    +T  +  G     FSI       +V L+
Sbjct: 851 --DAAVGTSVVTVSAVDRDAHSVITYQITSGNTRNRFSITSQSGGGLVSLA 899



 Score = 43.9 bits (102), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 50/189 (26%), Positives = 86/189 (45%), Gaps = 14/189 (7%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDLR--VKYWL-SNDYGERFSISRQ---GDIS 98
            F++ EY+V   E+  V   ++TV+    RD    + Y + S +   RFSI+ Q   G +S
Sbjct: 839  FTQPEYTVRLNEDAAVGTSVVTVSAVD-RDAHSVITYQITSGNTRNRFSITSQSGGGLVS 897

Query: 99   LMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLAD 158
            L   LDY+ E  Y   V A+D     +A + ++V + N   P F+   Y + +      D
Sbjct: 898  LALPLDYKLERQYVLAVTASDGTRQDTAQIVVNVTDANTHRPVFQSSHYTVNVNE----D 953

Query: 159  LTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSINDSGHISI-VDLSALNTSTIQLV 215
               G+ +  + A D D G+  R+T  +     +     D+G ++   +L   +  +  L 
Sbjct: 954  RPAGTTVVLISATDEDTGENARITYFMEDSIPQFRIDADTGAVTTQAELDYEDQVSYTLA 1013

Query: 216  VVATDTGNP 224
            + A D G P
Sbjct: 1014 ITARDNGIP 1022



 Score = 43.9 bits (102), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 40/149 (26%), Positives = 69/149 (46%), Gaps = 10/149 (6%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWL-SNDYGERFSIS-RQGDISL 99
            F ++E+ V   EN P+   +  VT   P +    ++ Y +   +  E F +    G+++ 
Sbjct: 1150 FEQDEFDVFVEENSPIGLAVARVTATDPDEGTNAQIMYQIVEGNIPEVFQLDIFSGELTA 1209

Query: 100  MQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPH--IPLA 157
            +  LDYE    Y   + AT   + + ATV++ +++ ND  P      +E+   +     +
Sbjct: 1210 LVDLDYEDRPEYVLVIQATSAPLVSRATVHVRLLDRNDNPPVLG--NFEILFNNYVTNRS 1267

Query: 158  DLTPGSVIGKVEAADGDKGDRVTLSL-RG 185
               PG  IG+V A D D  D +T S  RG
Sbjct: 1268 SSFPGGAIGRVPAHDPDISDSLTYSFERG 1296


>gi|403271355|ref|XP_003927592.1| PREDICTED: protocadherin-7 [Saimiri boliviensis boliviensis]
          Length = 1196

 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 62/203 (30%), Positives = 91/203 (44%), Gaps = 21/203 (10%)

Query: 37  GTSLRELQFSKNEYSVSALENLPVNYV--LLTVTTNKPRDLRVKYWLSNDYGERFSIS-R 93
           G S+ E+ F +N        N+P   V  +L    +  ++  + Y L +     F+I   
Sbjct: 477 GQSVVEVYFPEN--------NIPGERVATVLATDADSGKNAEIAYSLDSSVMGIFAIDPD 528

Query: 94  QGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELF 150
            GDI +   LD E  D Y F V A D    ++  S TV + V + ND DP+F    +  +
Sbjct: 529 SGDILVNTVLDREQTDRYEFKVNAKDKGIPVLQGSTTVIVQVADKNDNDPKFMQDVFTFY 588

Query: 151 LPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSI-NDSGHI-SIVDLSAL 207
           +      +L P S +G V   D DKG    +SL       +FSI ND+G I S +     
Sbjct: 589 VKE----NLQPNSPVGMVTVMDADKGRNAEMSLYIEENSNIFSIENDTGTIYSTMSFDRE 644

Query: 208 NTSTIQLVVVATDTGNPPRQASV 230
             +T    V A D G+PPR A+ 
Sbjct: 645 QQTTYTFRVKAVDGGDPPRSATA 667



 Score = 45.1 bits (105), Expect = 0.052,   Method: Compositional matrix adjust.
 Identities = 77/316 (24%), Positives = 136/316 (43%), Gaps = 46/316 (14%)

Query: 30  TLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVT---TNKPRDLRVKYWLSNDYG 86
           T+IV  A  +  + +F ++ ++    ENL  N  +  VT    +K R+  +  ++  +  
Sbjct: 565 TVIVQVADKNDNDPKFMQDVFTFYVKENLQPNSPVGMVTVMDADKGRNAEMSLYIEEN-S 623

Query: 87  ERFSISRQ-GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRF 142
             FSI    G I      D E + +Y F V A D      + +ATV++ V++ ND  P  
Sbjct: 624 NIFSIENDTGTIYSTMSFDREQQTTYTFRVKAVDGGDPPRSATATVSLFVMDENDNAPTV 683

Query: 143 RYPQ---YELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-D 195
             P+   Y L  P   +      +V+  V A D D G    L+   + G   K+F I+  
Sbjct: 684 TLPRNISYTLLPPSSNVR-----TVVATVLATDSDDGINADLNYSIVGGNPFKLFEIDPT 738

Query: 196 SGHISIV-DLSALNTSTIQLVVVATDTGNPPRQASVPAIMHFPEA------IVQQASSKL 248
           SG +S+V  L+  +    +LVV   D+G P +  +    +   E+      I  Q +  L
Sbjct: 739 SGVVSLVGKLTQKHYGLHRLVVQVNDSGQPSQSTTTLVHVFVNESVSNATVIDSQIARSL 798

Query: 249 NSGTSSTVL-------------IILGVVLIVLGFVIILLILYIHKNKHTKN-NGPPGSSH 294
           ++  +  +              I++GVV  ++  ++I+LI+ + +   +KN NG      
Sbjct: 799 HTPLTQDIAGDPSYEISKQRLSIVIGVVAGIMTVILIILIVVMARYCRSKNKNGYEAGKK 858

Query: 295 SKNDSFLSNVILPEKH 310
              D F      P++H
Sbjct: 859 DHEDFF-----TPQQH 869



 Score = 44.3 bits (103), Expect = 0.095,   Method: Compositional matrix adjust.
 Identities = 41/160 (25%), Positives = 72/160 (45%), Gaps = 26/160 (16%)

Query: 93  RQGDISLMQCLDYETEDSYRFTVY---ATDTLMTTSATVNISVVNVNDWDPRFRYPQYEL 149
           +Q  + +   LD E  DSY  T+      D   ++ A + + + +VND  PRF    YE 
Sbjct: 197 KQPQLIVKGALDREQRDSYELTLRVRDGGDPPRSSQAILRVLITDVNDNSPRFEKSVYEA 256

Query: 150 FLPHIPLADLTPGSVIGKVEAADGDKG---------DRVTLSLRGPYEKMFSIND-SGHI 199
            L      +  PG+ I ++ AAD D G            T S+R    ++  +++ SG +
Sbjct: 257 DLAE----NSAPGTPILQLRAADSDVGVNGQIEYVFGAATESVR----RLLRLDETSGWL 308

Query: 200 SI---VDLSALNTSTIQLVVVATDTGNPPRQASVPAIMHF 236
           S+   +D   +N   ++  V+A D G PP+      +++ 
Sbjct: 309 SVLHRIDREEVN--QLRFTVMARDRGQPPKTDKATVVLNI 346


>gi|348563327|ref|XP_003467459.1| PREDICTED: protocadherin-7-like isoform 1 [Cavia porcellus]
          Length = 1070

 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 62/203 (30%), Positives = 92/203 (45%), Gaps = 21/203 (10%)

Query: 37  GTSLRELQFSKNEYSVSALENLPVNYV--LLTVTTNKPRDLRVKYWLSNDYGERFSIS-R 93
           G S+ E+ F +N        N+P   V  +L    +  ++  + Y L +     F+I   
Sbjct: 537 GQSVVEVYFPEN--------NIPGERVATVLATDADSGKNAEIAYSLDSAVMGIFAIDPD 588

Query: 94  QGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELF 150
            GDI +   LD E  D Y F V A D    ++  S TV + V + ND DP+F    +  +
Sbjct: 589 SGDILVNTVLDREQTDRYEFKVNAKDKGIPVLQGSTTVIVQVADKNDNDPKFMQDIFTFY 648

Query: 151 LPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSI-NDSGHI-SIVDLSAL 207
           +      +L P S +G V   D DKG    +SL       +FSI ND+G I S +     
Sbjct: 649 VKE----NLQPNSPVGMVTVMDADKGRNAEMSLYIEENSNIFSIENDTGTIYSTMSFDRE 704

Query: 208 NTSTIQLVVVATDTGNPPRQASV 230
           + +T    V A D G+PPR A+ 
Sbjct: 705 HQTTYTFRVKAVDGGDPPRSATA 727



 Score = 46.2 bits (108), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 79/318 (24%), Positives = 137/318 (43%), Gaps = 50/318 (15%)

Query: 30  TLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVT---TNKPRDLRVKYWLSNDYG 86
           T+IV  A  +  + +F ++ ++    ENL  N  +  VT    +K R+  +  ++  +  
Sbjct: 625 TVIVQVADKNDNDPKFMQDIFTFYVKENLQPNSPVGMVTVMDADKGRNAEMSLYIEEN-S 683

Query: 87  ERFSISRQ-GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRF 142
             FSI    G I      D E + +Y F V A D      + +ATV++ V++ ND  P  
Sbjct: 684 NIFSIENDTGTIYSTMSFDREHQTTYTFRVKAVDGGDPPRSATATVSLFVMDENDNAPTV 743

Query: 143 RYPQ---YELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIND- 195
             P+   Y L  P   +      +V+  V A D D G    L+   + G   K+F I+  
Sbjct: 744 TLPRNISYTLLPPSSNVR-----TVVATVLATDSDDGINADLNYSIVGGNPFKLFEIDST 798

Query: 196 SGHISIV-DLSALNTSTIQLVVVATDTGNPPRQASVPAIMHF--------PEAIVQQASS 246
           SG +S+V  L+  +    +LVV   D+G P +  S  A++H            I  Q + 
Sbjct: 799 SGVVSLVGKLTHKHYGLHRLVVQVNDSGQPSQ--STTALVHVFVNESVSNATVIDSQIAR 856

Query: 247 KLNSGTSSTVL-------------IILGVVLIVLGFVIILLILYIHKNKHTKN-NGPPGS 292
            L++  +  +              I++GVV  ++  ++I+LI+ + +   +KN NG    
Sbjct: 857 SLHTPLTQDIAGDPSYEISKQRLSIVIGVVAGIMTVILIILIVVMARYCRSKNKNGYEAG 916

Query: 293 SHSKNDSFLSNVILPEKH 310
                D F      P++H
Sbjct: 917 KKDHEDFF-----TPQQH 929



 Score = 43.1 bits (100), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 41/150 (27%), Positives = 69/150 (46%), Gaps = 26/150 (17%)

Query: 93  RQGDISLMQCLDYETEDSYRFTVY---ATDTLMTTSATVNISVVNVNDWDPRFRYPQYEL 149
           +Q  + +   LD E  DSY  T+      D   ++ A + + + +VND  PRF    YE 
Sbjct: 257 KQPQLIVKGALDREQRDSYELTLRVRDGGDPPRSSQAILRVLITDVNDNSPRFEKSVYEA 316

Query: 150 FLPHIPLADLTPGSVIGKVEAADGDKG---------DRVTLSLRGPYEKMFSIND-SGHI 199
            L      +  PG+ I ++ AAD D G            T S+R    ++  +++ SG +
Sbjct: 317 DLAE----NSAPGTPILQLRAADLDVGVNGQIEYVFGAATESVR----RLLRLDETSGWL 368

Query: 200 SI---VDLSALNTSTIQLVVVATDTGNPPR 226
           S+   +D   +N   ++  V+A D G PP+
Sbjct: 369 SVLHRIDREEVN--QLRFTVMARDRGQPPK 396


>gi|194219812|ref|XP_001917818.1| PREDICTED: protocadherin gamma-A2-like [Equus caballus]
          Length = 820

 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 59/195 (30%), Positives = 95/195 (48%), Gaps = 21/195 (10%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVT---TNKPRDLRVKYWLSNDYGERFSI----SRQGDI 97
           F+++EY VS LEN+P+   +LTVT    ++  + +V Y+     GE   +    S  GDI
Sbjct: 242 FTQSEYRVSVLENIPLGTRILTVTATDADEGYNAQVAYFQEKTPGESSEVFELKSTSGDI 301

Query: 98  SLMQCLDYETEDSYRFTVYATDT-LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
           ++++ LDYE    +   + A D   + T   V ++V++VND  P F        +P    
Sbjct: 302 TIIKSLDYEEAKFHEIDIEAQDGPGLLTRTKVIVTVLDVNDNAPEFYMTSATSSVPE--- 358

Query: 157 ADLTPGSVIGKVEAADGDKGDR----VTLSLRGPYEKMFSINDSGHISIVDLSALNT--- 209
            D  PG+VI      D D G       +LS   P++   S+++  +  +V  SAL+    
Sbjct: 359 -DSPPGTVIALFNVHDRDSGQNAFITCSLSENLPFKLERSVDN--YHRLVTTSALDREQF 415

Query: 210 STIQLVVVATDTGNP 224
           S+  + V A D GNP
Sbjct: 416 SSYNITVTAKDGGNP 430



 Score = 43.5 bits (101), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 72/274 (26%), Positives = 116/274 (42%), Gaps = 45/274 (16%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWLSND--YGERFS--ISRQGDI 97
           F    YS    EN P    ++++  + P       V Y L+ D   G   S  IS   D 
Sbjct: 452 FPHMSYSAYIPENNPRGTSIISMKAHDPDSDDSAHVTYSLTQDTLQGAPLSSYISINSDT 511

Query: 98  SLMQCL---DYETEDSYRFTVYATDTL---MTTSATVNISVVNVNDWDPRFRYPQYELFL 151
            ++  L   DYE     +  V A D+    ++++ ++++ V++ ND  P   YP     L
Sbjct: 512 GVLYALHSFDYEQFRHLQLWVTARDSGKPPLSSNVSLSLFVLDQNDNTPEILYPT----L 567

Query: 152 P-----HIPLA--DLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-DSGHI- 199
           P      + LA     PG ++ KV A D D G    LS   L+     +F++   +G + 
Sbjct: 568 PTDGSTGVELAPRSAEPGYLVTKVVAVDQDSGQNAWLSYRLLKASEPGLFTVGLHTGELR 627

Query: 200 ---SIVDLSALNTSTIQLVVVATDTGNPPRQASVPAIMHFPEAI------VQQASSKLNS 250
              +++D  AL  S   LVV   D G PP  A+V   +   ++I      +   +   N 
Sbjct: 628 TARALLDRDALKQS---LVVSVQDHGQPPLSATVTLTVAVADSIPDVLADLGSLNPSANP 684

Query: 251 GTSSTVLIILGVV----LIVLGFVIILLILYIHK 280
           G S   L ++  V     + L FVI+LL L + +
Sbjct: 685 GDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLRR 718



 Score = 42.0 bits (97), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 44/142 (30%), Positives = 64/142 (45%), Gaps = 17/142 (11%)

Query: 102 CLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLAD 158
            LD E   SY  TV A D     ++T A V + V ++ND  P F +  Y  ++P     +
Sbjct: 409 ALDREQFSSYNITVTAKDGGNPSLSTDAHVLVQVADINDNPPTFPHMSYSAYIPE----N 464

Query: 159 LTPGSVIGKVEAADGDKGD--RVTLSLR------GPYEKMFSIN-DSGHI-SIVDLSALN 208
              G+ I  ++A D D  D   VT SL        P     SIN D+G + ++       
Sbjct: 465 NPRGTSIISMKAHDPDSDDSAHVTYSLTQDTLQGAPLSSYISINSDTGVLYALHSFDYEQ 524

Query: 209 TSTIQLVVVATDTGNPPRQASV 230
              +QL V A D+G PP  ++V
Sbjct: 525 FRHLQLWVTARDSGKPPLSSNV 546


>gi|347300200|ref|NP_001231413.1| protocadherin-7 precursor [Sus scrofa]
          Length = 1248

 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 62/203 (30%), Positives = 92/203 (45%), Gaps = 21/203 (10%)

Query: 37  GTSLRELQFSKNEYSVSALENLPVNYV--LLTVTTNKPRDLRVKYWLSNDYGERFSIS-R 93
           G S+ E+ F +N        N+P   V  +L    +  ++  + Y L +     F+I   
Sbjct: 537 GQSVVEVYFPEN--------NIPGERVATVLATDADSGKNAEIAYSLDSSVMGIFAIDPD 588

Query: 94  QGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELF 150
            GDI +   LD E  D Y F V A D    ++  S TV + V + ND DP+F    +  +
Sbjct: 589 SGDILVNTVLDREQTDRYEFKVNAKDKGIPVLQGSTTVIVQVADKNDNDPKFMQDIFTFY 648

Query: 151 LPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSI-NDSGHI-SIVDLSAL 207
           +      +L P S +G V   D DKG    +SL       +FSI ND+G I S +     
Sbjct: 649 VKE----NLQPNSPVGMVTVMDADKGRNAEMSLYIEENSNIFSIENDTGTIYSTMSFDRE 704

Query: 208 NTSTIQLVVVATDTGNPPRQASV 230
           + +T    V A D G+PPR A+ 
Sbjct: 705 HQTTYTFRVKAVDGGDPPRSATA 727



 Score = 44.7 bits (104), Expect = 0.083,   Method: Compositional matrix adjust.
 Identities = 77/316 (24%), Positives = 136/316 (43%), Gaps = 46/316 (14%)

Query: 30  TLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVT---TNKPRDLRVKYWLSNDYG 86
           T+IV  A  +  + +F ++ ++    ENL  N  +  VT    +K R+  +  ++  +  
Sbjct: 625 TVIVQVADKNDNDPKFMQDIFTFYVKENLQPNSPVGMVTVMDADKGRNAEMSLYIEEN-S 683

Query: 87  ERFSISRQ-GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRF 142
             FSI    G I      D E + +Y F V A D      + +ATV++ V++ ND  P  
Sbjct: 684 NIFSIENDTGTIYSTMSFDREHQTTYTFRVKAVDGGDPPRSATATVSLFVMDENDNAPTV 743

Query: 143 RYPQ---YELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-D 195
             P+   Y L  P   +      +V+  V A D D G    L+   + G   K+F I+  
Sbjct: 744 TLPRNISYTLLPPSSNVR-----TVVATVLATDSDDGINADLNYSIVGGNPFKLFEIDPT 798

Query: 196 SGHISIV-DLSALNTSTIQLVVVATDTGNPPRQASVPAIMHFPEA------IVQQASSKL 248
           SG +S+V  L+  +    +LVV   D+G P +  +    +   E+      I  Q +  L
Sbjct: 799 SGVVSLVGKLTQKHYGLHRLVVQVNDSGQPSQSTTTLVHVFVNESVSNATVIDSQIARSL 858

Query: 249 NSGTSSTVL-------------IILGVVLIVLGFVIILLILYIHKNKHTKN-NGPPGSSH 294
           ++  +  +              I++GVV  ++  ++I+LI+ + +   +KN NG      
Sbjct: 859 HTPLTQDIAGDPSYEISKQRLSIVIGVVAGIMTVILIILIVVMARYCRSKNKNGYEAGKK 918

Query: 295 SKNDSFLSNVILPEKH 310
              D F      P++H
Sbjct: 919 DHEDFF-----TPQQH 929



 Score = 43.1 bits (100), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 41/160 (25%), Positives = 72/160 (45%), Gaps = 26/160 (16%)

Query: 93  RQGDISLMQCLDYETEDSYRFTVY---ATDTLMTTSATVNISVVNVNDWDPRFRYPQYEL 149
           +Q  + +   LD E  DSY  T+      D   ++ A + + + +VND  PRF    YE 
Sbjct: 257 KQPQLIVKGALDREQRDSYELTLRVRDGGDPPRSSQAILRVLITDVNDNSPRFEKSVYEA 316

Query: 150 FLPHIPLADLTPGSVIGKVEAADGDKG---------DRVTLSLRGPYEKMFSIND-SGHI 199
            L      +  PG+ I ++ AAD D G            T S+R    ++  +++ SG +
Sbjct: 317 DLAE----NSAPGTPILQLRAADLDVGVNGQIEYVFGAATESVR----RLLRLDETSGWL 368

Query: 200 SI---VDLSALNTSTIQLVVVATDTGNPPRQASVPAIMHF 236
           S+   +D   +N   ++  V+A D G PP+      +++ 
Sbjct: 369 SVLHRIDREEVN--QLRFTVMARDRGQPPKTDKATVVLNI 406


>gi|195388388|ref|XP_002052862.1| GJ19658 [Drosophila virilis]
 gi|194149319|gb|EDW65017.1| GJ19658 [Drosophila virilis]
          Length = 3639

 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 68/210 (32%), Positives = 106/210 (50%), Gaps = 28/210 (13%)

Query: 42   ELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDL----RVKYWLSNDYGERFSI-SRQGD 96
            E +F  ++Y  S  E+  +   +L++  +   DL    R+ Y L+N+   +F+I S+ G 
Sbjct: 1992 EPRFELSKYMASVPEDAAIGSSVLSIKASDA-DLGVNSRLVYSLANETQWQFAIDSKSGL 2050

Query: 97   ISLMQCLDYETEDSYRFTVYATDT----LMTTSATVNISVVNVNDWDPRF-RYPQYELFL 151
            I+ +  LD E + SY F V ATD     + + S  V I+V+++ND  P F RYP      
Sbjct: 2051 ITTVGKLDRELQSSYSFMVLATDCGRYEVRSGSVAVQINVLDINDNKPIFERYPYSGQV- 2109

Query: 152  PHIPLADLTPGSVIGKVEAADGDKGDRVTL--------SLRGPYEK-MFSIN-DSGHISI 201
                 A + PG  + KV+A D D+G    L        +L  P  +  F IN ++G +S 
Sbjct: 2110 ----AALIQPGQTLLKVQAHDADQGANGELLYALKADSTLTTPAMRSKFRINPNTGALSA 2165

Query: 202  VD-LSALNTSTIQLVVVATDTGNPPRQASV 230
               L++     +QL V+A D GNPP Q+SV
Sbjct: 2166 TQSLASETGRLLQLEVIARDKGNPP-QSSV 2194



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 60/221 (27%), Positives = 93/221 (42%), Gaps = 34/221 (15%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSN------------------ 83
            F ++EY+V+  E+  +N  ++ V     +   + R+ Y + +                  
Sbjct: 1069 FERDEYAVNVSESRAINAQIIQVNASDLDTGNNARITYRIVDAGTDNASQSLASVGGGGS 1128

Query: 84   --DYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVND 137
              D  + F I    G I L   LD E+ D Y  TV ATD         A V + V++ ND
Sbjct: 1129 DADLAQHFGIFPNSGWIYLRAALDRESRDRYELTVLATDNGTPAAHARARVLVRVLDAND 1188

Query: 138  WDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSIND- 195
             DP+F+   YE  +      +L  G+V+G V A+D D G+   +     P    F ++  
Sbjct: 1189 NDPKFQRESYEFRIEE----NLRRGAVVGVVSASDADLGENAAIRYSLLPANSSFQVHPV 1244

Query: 196  SGHISIVD-LSALNTSTIQLVVVATDTGNPPRQASVPAIMH 235
            +G IS  + L         L+V A D G P R A  P  +H
Sbjct: 1245 TGEISTREPLDREMRELYDLMVEARDQGTPTRSARAPVRVH 1285



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 65/211 (30%), Positives = 103/211 (48%), Gaps = 19/211 (9%)

Query: 29  ATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGER 88
           AT++V+    +  E  F ++ Y+VS  EN PV   +L V+ + P D  V   ++   GE 
Sbjct: 617 ATVLVTIHDVNDNEPIFDQSFYNVSVAENEPVGRCILKVSASDP-DCGVNAMVNYTLGEG 675

Query: 89  FS-------ISRQGDISLMQCLDYETEDSYRFTVYATDT-LMTTSATVNISVVNVNDWDP 140
           F         S  G+I +   LDYE  +SY F V ATD   ++T+A + + + +VND  P
Sbjct: 676 FKHLTEFEVRSASGEICIAGELDYERRNSYEFPVLATDRGGLSTTAMIKLQLTDVNDNRP 735

Query: 141 RFRYPQYELFLPHIPLADL--TPGSVIGKVEAADGDKGDRVTLSLR---GPYEKMFSIND 195
            F   +Y + L     A    TP  ++  V A D D G    +S R   G    +F I+ 
Sbjct: 736 VFYPREYNVSLRESGPAQAGGTPMPIVAVV-ATDPDAGSFGQVSYRIVAGNEAGIFRIDR 794

Query: 196 -SGHISIV--DLSALNTSTIQLV-VVATDTG 222
            SG I ++  D+ ++ T  + ++ + ATD G
Sbjct: 795 ASGEIFVIRPDMLSVRTQAMHMLNISATDGG 825



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 64/242 (26%), Positives = 106/242 (43%), Gaps = 36/242 (14%)

Query: 17   AIQYDNQDRYALATLIV--------SKAGTSLREL-------QFSKNEYSVSALENLPVN 61
            A+  +++DRY L  L          ++A   +R L       +F +  Y     ENL   
Sbjct: 1150 ALDRESRDRYELTVLATDNGTPAAHARARVLVRVLDANDNDPKFQRESYEFRIEENLRRG 1209

Query: 62   YVLLTVTTNKP---RDLRVKYWL--SNDYGERFSISRQGDISLMQCLDYETEDSYRFTVY 116
             V+  V+ +      +  ++Y L  +N   +   ++  G+IS  + LD E  + Y   V 
Sbjct: 1210 AVVGVVSASDADLGENAAIRYSLLPANSSFQVHPVT--GEISTREPLDREMRELYDLMVE 1267

Query: 117  ATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADG 173
            A D      +  A V + V +VND  P    PQ ++        +  PG+ + ++ A D 
Sbjct: 1268 ARDQGTPTRSARAPVRVHVTDVNDNAPEIADPQEDVVSVR---EEQPPGTEVVRIRAIDR 1324

Query: 174  DKGDRVTLS---LRG---PYEKMFSIN-DSGHISI-VDLSALNTSTIQLVVVATDTGNPP 225
            D G   +++   L+G       +FSI+ ++G I   V L     S  +L V ATD GNPP
Sbjct: 1325 DHGQNASINYSLLKGRDSDGHGLFSIDANTGLIRTRVMLDHEERSIYRLAVAATDGGNPP 1384

Query: 226  RQ 227
            +Q
Sbjct: 1385 KQ 1386



 Score = 48.5 bits (114), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 60/207 (28%), Positives = 99/207 (47%), Gaps = 27/207 (13%)

Query: 45  FSKNEYSVSALENLPVNYVLLTV---TTNKPRDLRVKYWLS---NDYGERFSI-SRQGDI 97
           F+++ Y  +  EN  V   +L V    T+   +  V+Y ++   +D  + F I +R G +
Sbjct: 308 FNQSRYFATVPENATVGTSVLQVYASDTDADENGLVEYAINRRQSDKEQMFRIDARTGAV 367

Query: 98  SLMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFL--- 151
            + + LD+ET++ +   V A D     + T+A V+I V +VND  P        +FL   
Sbjct: 368 YINKPLDFETKELHELVVVAKDHGEQPLETTAFVSIRVTDVNDNQPTINV----IFLSED 423

Query: 152 --PHIPLADLTPGSVIGKVEAADGDKGDR---VTLSLRGP--YEKMFSINDSGHISIVDL 204
             P I  +   PG  + ++   D D       V +SL+G   +  + + ++S ++ IV+L
Sbjct: 424 ASPKISES-AQPGEFVARISVHDPDSKTEYANVNVSLKGGDGHFALTTRDNSIYLVIVNL 482

Query: 205 --SALNTSTIQLVVVATDTGNPPRQAS 229
                 TS   L VVATD G PP  AS
Sbjct: 483 PLDREATSNYTLSVVATDKGTPPLHAS 509



 Score = 43.9 bits (102), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 46/152 (30%), Positives = 66/152 (43%), Gaps = 18/152 (11%)

Query: 89   FSISR-QGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRF---RY 144
            F + R  G + L + LDYE +  Y+  + A+D       T+ + V + ND  PRF   R 
Sbjct: 2529 FGLDRYSGKLVLKRRLDYEQQQEYQLEIIASDAAHEARTTLTVRVTDENDNAPRFLAERP 2588

Query: 145  PQYELFLPHIPLADLTPGSVIGKVE-----AADGD-KGDRVTLSLR-GPYEKMFSINDSG 197
            P Y   LP     +L   S    VE     A D D +G    LS    P    FSI+ + 
Sbjct: 2589 PAYFALLP--AATELLESSSSMDVELLSVNATDADAEGRNSQLSYHIEPPLAGFSIHATT 2646

Query: 198  HISIVDLSALNTSTIQ-----LVVVATDTGNP 224
             +  V++S L+ +        L +VA D G P
Sbjct: 2647 GVVSVNISQLSAAVSSSGDYFLSIVARDAGKP 2678



 Score = 43.1 bits (100), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 60/211 (28%), Positives = 95/211 (45%), Gaps = 31/211 (14%)

Query: 45   FSKNEYSVSALENLPVNYVLLTV---TTNKPRDLRVKYWL-SNDYGERFSIS-RQGDISL 99
            F K  Y+    E++P   V+ +V   +++  +   V+Y + S D    FSI    G+I +
Sbjct: 849  FEKARYNYYVKEDVPRGTVVGSVIATSSDTAQRSPVRYSIYSGDPDGYFSIEPTSGNIRI 908

Query: 100  MQCLDYETEDSYRFTVYAT--DTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLA 157
               LD+E +      + AT  +  +     VNI V +VND  P F      + +P    A
Sbjct: 909  AHPLDHEAKAQVLLNIQATSGEPPVYGHTQVNIEVEDVNDNAPEFETSMVRISVPEN--A 966

Query: 158  DLTPGSVIGKVEAADGDKGD--RVTLSLRGPYEK------------MFSIN-DSGHISIV 202
            +L  G+ +    A D D G   +VT SL+G   +            +F+I+  SGH+ + 
Sbjct: 967  EL--GAPLFAAHAHDKDSGSSGQVTYSLKGNATQQHVKALAAGSAPLFAIDARSGHLVLS 1024

Query: 203  DLSALNTSTIQ---LVVVATDTGNPPRQASV 230
                L+  T Q   L+V ATD G PP  A +
Sbjct: 1025 --RHLDYETAQRHSLIVTATDAGLPPLSADL 1053



 Score = 42.0 bits (97), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 32/105 (30%), Positives = 46/105 (43%), Gaps = 6/105 (5%)

Query: 95   GDISLMQCLDYETEDSYRFTVYATDTL-MTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
            G +S     DYE    Y   + A+D    +    V I + + +++ P+F    Y   LP 
Sbjct: 2976 GIVSSAAVFDYEQRQRYHLQLRASDMGGRSARVAVRIEIESRDEFTPQFTERTYRFVLP- 3034

Query: 154  IPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDS 196
               A L  G V+G+V A D D G   RV   L  P+   F +N S
Sbjct: 3035 -ASAALPLGFVVGQVTATDADSGADGRVVYQLSAPHSH-FKVNRS 3077


>gi|22090634|dbj|BAC06837.1| Pf1-cadherin [Ptychodera flava]
          Length = 1959

 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 64/211 (30%), Positives = 100/211 (47%), Gaps = 16/211 (7%)

Query: 31  LIVSKAGTSLRELQFSKNEYSVSALENLP---VNYVLLTVTTNKPRDLRVKYWLSNDYGE 87
           + ++K+G +   L+F+++ Y  S LEN P   V Y   +++     DL V+Y L     E
Sbjct: 104 IYITKSGDNSEHLKFTQDRYEGSVLENSPAGTVVYGFESISACSECDL-VEYSLLGTGEE 162

Query: 88  RFSISRQGDISLMQ---CLDYETEDSYRFT-VYATDTLMTTSATVNISVVNVNDWDPRFR 143
           +F++  +  I  +Q    LD E+  SY  T V A+ +L T +  + I+V +VND  P F 
Sbjct: 163 KFNLENKDGIVTIQTNEVLDRESRASYNLTLVAASASLETETTDLLITVEDVNDNAPEFD 222

Query: 144 YPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKM-FSIN-DSGHISI 201
               E+ +P I  AD    +++  V A D D G    +        M FS++ D+G + I
Sbjct: 223 PETCEVTVPEISPAD----AIVAYVHAVDPDAGKNGKVMYYTDTNDMTFSVHPDTGGVII 278

Query: 202 VDLSALNTSTIQLVVVATDTGNPPRQASVPA 232
                L      L V A D G P  +AS P 
Sbjct: 279 G--GPLQAKEYTLTVFARDRGKPSLEASTPG 307



 Score = 51.2 bits (121), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 46/176 (26%), Positives = 81/176 (46%), Gaps = 15/176 (8%)

Query: 13  LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKP 72
           +VV+A+          AT+ VS    +  E   +K+   +S  EN+PV+  +  V     
Sbjct: 649 IVVKAVDGGAHTGTVTATIYVSDENDNPPEFPQAKSFVEIS--ENVPVDSSVFKVIAID- 705

Query: 73  RDLRVKYW--LSNDYGERFSISRQGD-----ISLMQCLDYE-TEDSYRFTVYATDTLMTT 124
           RD+ +  +  +S + GE+F I    D     + + + +D+E  E  +  T+   D+  T 
Sbjct: 706 RDVGINSYSIISGNVGEKFRIETDPDSGYAIVKVAKKIDFELNESKFVLTIEVDDSKNTA 765

Query: 125 SATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVT 180
           +  ++I V++ ND  P F  P+Y    P     D    + IG V A D DK ++ +
Sbjct: 766 TTELDIRVMDANDEVPSFSQPRYLAEHPE----DFAKWTTIGTVAATDRDKSEKFS 817



 Score = 40.4 bits (93), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 37/115 (32%), Positives = 57/115 (49%), Gaps = 9/115 (7%)

Query: 64  LLTVTTN-KPRDLRVKYWLSNDYGERFSIS-RQGDISLMQCLDYETEDSY--RFTVYATD 119
           +LTV  N  P +++ +   + ++ E F+I    G IS  + LD E        FTV A++
Sbjct: 487 ILTVRANGDPSNIQYRIQQA-EFREDFAIGLTSGIISSRKHLDREDNKGQVREFTVTASN 545

Query: 120 TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGD 174
           +  TTS  V I + +VND  P+F YP Y    P     +  PG  +  ++A D D
Sbjct: 546 SAGTTSVEVLIKIKDVNDNAPQFPYPPYIGSFPE----NGAPGVTVMTIQAEDLD 596


>gi|345319681|ref|XP_003430184.1| PREDICTED: cadherin-23 [Ornithorhynchus anatinus]
          Length = 2471

 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 59/195 (30%), Positives = 89/195 (45%), Gaps = 20/195 (10%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTT----NKPRDLRVKYWLSNDYGERFSIS-RQGDISL 99
            F +  Y +  LE++P+  VLLTVT     + P  L ++Y L +  G +F I    GDI +
Sbjct: 1699 FGQAAYQIPVLEDVPLGTVLLTVTATDADSGPFAL-IQYSLGDGEG-KFGIDPSTGDIFV 1756

Query: 100  MQCLDYETEDSYRFTVYATDT-------LMTTSATVNISVVNVNDWDPRFRYPQYELFLP 152
            +  LD E +D Y  T  A D            S  V I+V++VND  P+F   Q+   + 
Sbjct: 1757 LSALDREKKDHYILTAVARDNPGDVSSNRRENSVQVVITVLDVNDCRPQFSRGQFSTSV- 1815

Query: 153  HIPLADLTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSINDSGHISIVDLSALNTS 210
                 +   G+ +  + A D D+GD   V  ++ GP  + F I+    +        +  
Sbjct: 1816 ---YENEPEGTSVISMVATDQDEGDNGEVVYTMDGPGVEAFQIHQDSGLVTTRRPLQSYE 1872

Query: 211  TIQLVVVATDTGNPP 225
               L VVATD G PP
Sbjct: 1873 RFNLTVVATDRGQPP 1887



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 43/142 (30%), Positives = 69/142 (48%), Gaps = 20/142 (14%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPR---DLRVKYWLSNDYGERFSIS------RQG 95
            FS    +V  LEN P  + +L VT +      + ++ Y + +   +RF I       R G
Sbjct: 1360 FSPAALTVRLLENSPPGFSILQVTASDKDSGPNGQLSYRIESGAQDRFLIHPVTGLVRVG 1419

Query: 96   DISLMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLP 152
            D ++    D E +D+YR TV A D   T ++ +A V I + ++ND  P F  P   + +P
Sbjct: 1420 DATI----DREEQDAYRLTVVAVDRGTTPLSGTAVVTILIDDINDSRPEFLDPVQTVSVP 1475

Query: 153  HIPLADLTPGSVIGKVEAADGD 174
                   +PG+V+ +V A D D
Sbjct: 1476 E----SASPGTVVAEVPAIDRD 1493



 Score = 43.9 bits (102), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 51/176 (28%), Positives = 83/176 (47%), Gaps = 25/176 (14%)

Query: 76  RVKYWLSNDYGERFSISRQ-GDISLMQCLDYETEDSYRFTVYATDTL-MTTSATVNISVV 133
           +V Y+ S+D  +RFS+ +  G I L+  LD+ET   Y  TV A D     T+  V ++V+
Sbjct: 102 KVSYFFSDD-PDRFSLDKDTGVIILIARLDFETTQRYTLTVIARDGGGEETTGRVRVNVL 160

Query: 134 NVNDWDPRFRYPQYELFL----PHIPLADLTPGSVIGKVEAADGDK--GDRVTLSL--RG 185
           +VND  P F+   Y   L    P I        + + ++ A D D    +++  S+    
Sbjct: 161 DVNDNVPTFQKDSYLGALRENEPSI--------TQLVRLRATDEDSPPNNQIAYSIVNAS 212

Query: 186 PYEKMFSIN---DSGHISI---VDLSALNTSTIQLVVVATDTGNPPRQASVPAIMH 235
            +   F+IN     G IS+   +D   +    + L V+A D G PP  ++VP  + 
Sbjct: 213 AFGSYFNINVYEGYGVISVSHPLDYEQIPNGLLYLTVMAKDAGIPPLNSTVPVTIE 268



 Score = 42.7 bits (99), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 40/138 (28%), Positives = 70/138 (50%), Gaps = 14/138 (10%)

Query: 50  YSVSALENLPVNYVL--LTVTTNK-PRDLRVKYWLSN-DYGERFSIS-RQGDISLMQCLD 104
           Y+VS  E++P ++ +  L  T N    +  + Y+++  +   +FS+  R G +  +  LD
Sbjct: 432 YNVSLPEDVPRDFRVARLNCTDNDVGLNAELSYFITGGNQDGKFSVGYRDGVVRTVVSLD 491

Query: 105 YETEDSYRFTVYATDT-----LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADL 159
            ET  +Y   + A D        T +ATV ++V++VND  P F    YE  +P     D+
Sbjct: 492 RETTATYTLILEAIDNGPSGKRRTGTATVYVTVLDVNDNRPIFLQSSYEASVPE----DI 547

Query: 160 TPGSVIGKVEAADGDKGD 177
              S I +++A D D+G+
Sbjct: 548 PEASSIVQLKATDADEGE 565



 Score = 40.8 bits (94), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 34/121 (28%), Positives = 57/121 (47%), Gaps = 11/121 (9%)

Query: 124  TSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG--DRVT- 180
            T   + +++++VND  P+FR      F+  + L   TPG+ +  V A D DKG   ++T 
Sbjct: 1572 TPTPLTVNILDVNDNTPQFRPFGITYFMERV-LEGATPGTTLISVAAVDPDKGANGQITY 1630

Query: 181  --LSLRGPYEKMFSINDSGHI---SIVDLSALNTSTIQLVVVATDTGNPPRQASVPAIMH 235
              L+L  P       + +G +     VD   +    +   V A+D G+PPR A +P  + 
Sbjct: 1631 TLLNLVPPGYAQLEDDSTGKVIANRTVDYEEVQW--LNFTVRASDNGSPPRAAEIPVYLE 1688

Query: 236  F 236
             
Sbjct: 1689 I 1689


>gi|300794580|ref|NP_001179904.1| protocadherin-7 precursor [Bos taurus]
 gi|296486647|tpg|DAA28760.1| TPA: protocadherin 7 [Bos taurus]
          Length = 1203

 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 62/203 (30%), Positives = 92/203 (45%), Gaps = 21/203 (10%)

Query: 37  GTSLRELQFSKNEYSVSALENLPVNYV--LLTVTTNKPRDLRVKYWLSNDYGERFSIS-R 93
           G S+ E+ F +N        N+P   V  +L    +  ++  + Y L +     F+I   
Sbjct: 492 GQSVVEVYFPEN--------NIPGERVATVLATDADSGKNAEIAYSLDSSVMGIFAIDPD 543

Query: 94  QGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELF 150
            GDI +   LD E  D Y F V A D    ++  S TV + V + ND DP+F    +  +
Sbjct: 544 SGDILVNTMLDREQTDRYEFKVNARDKGVPVLQGSTTVIVQVADKNDNDPKFMQDVFTFY 603

Query: 151 LPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSI-NDSGHI-SIVDLSAL 207
           +      +L P S +G V   D DKG    +SL       +FSI ND+G I S +     
Sbjct: 604 VKE----NLQPNSPVGMVTVMDADKGRNAEMSLYIEENSNIFSIENDTGTIYSTMSFDRE 659

Query: 208 NTSTIQLVVVATDTGNPPRQASV 230
           + +T    V A D G+PPR A+ 
Sbjct: 660 HQTTYTFRVKAVDGGDPPRSATA 682



 Score = 45.1 bits (105), Expect = 0.063,   Method: Compositional matrix adjust.
 Identities = 77/316 (24%), Positives = 136/316 (43%), Gaps = 46/316 (14%)

Query: 30  TLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVT---TNKPRDLRVKYWLSNDYG 86
           T+IV  A  +  + +F ++ ++    ENL  N  +  VT    +K R+  +  ++  +  
Sbjct: 580 TVIVQVADKNDNDPKFMQDVFTFYVKENLQPNSPVGMVTVMDADKGRNAEMSLYIEEN-S 638

Query: 87  ERFSISRQ-GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRF 142
             FSI    G I      D E + +Y F V A D      + +ATV++ V++ ND  P  
Sbjct: 639 NIFSIENDTGTIYSTMSFDREHQTTYTFRVKAVDGGDPPRSATATVSLFVMDENDNAPTV 698

Query: 143 RYPQ---YELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIND- 195
             P+   Y L  P   +      +V+  V A D D G    L+   + G   K+F I+  
Sbjct: 699 TLPRNISYTLLPPSSNVR-----TVVATVLATDSDDGINADLNYSIVGGNPFKLFEIDST 753

Query: 196 SGHISIV-DLSALNTSTIQLVVVATDTGNPPRQASVPAIMHFPEA------IVQQASSKL 248
           SG +S+V  L+  +    +LVV   D+G P +  +    +   E+      I  Q +  L
Sbjct: 754 SGVVSLVGKLTQKHYGLHRLVVQVNDSGQPSQSTTTLVHVFVNESVSNATVIDSQIARSL 813

Query: 249 NSGTSSTVL-------------IILGVVLIVLGFVIILLILYIHKNKHTKN-NGPPGSSH 294
           ++  +  +              I++GVV  ++  ++I+LI+ + +   +KN NG      
Sbjct: 814 HTPLTQDIAGDPSYEISKQRLSIVIGVVAGIMTVILIILIVVMARYCRSKNKNGYEAGKK 873

Query: 295 SKNDSFLSNVILPEKH 310
              D F      P++H
Sbjct: 874 DHEDFF-----TPQQH 884


>gi|156361307|ref|XP_001625459.1| predicted protein [Nematostella vectensis]
 gi|156212294|gb|EDO33359.1| predicted protein [Nematostella vectensis]
          Length = 814

 Score = 65.9 bits (159), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 58/207 (28%), Positives = 105/207 (50%), Gaps = 20/207 (9%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRD------LRVKYWLSND-YGERFSIS-RQGD 96
           F+   Y++   E   +   +L V+ N   D        ++Y+L +    ++FSI+   G 
Sbjct: 493 FTTLYYTLQLSEATSIGTRILRVSANDRDDKDEGVNAEIRYFLKDAIVSKKFSINDTTGQ 552

Query: 97  ISLMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
           I++ Q +DYE   SY F V+A+D     +T S++V I++++VND  P F   +Y + L  
Sbjct: 553 ITIKQAVDYEERSSYSFEVFASDGGEARLTGSSSVRITIIDVNDNRPYFLPTRYYVQL-- 610

Query: 154 IPLADLTPGSVIGKVEAADGDKG--DRVTLS-LRGPYEKMFSINDSGHISIVD--LSALN 208
             + ++  G+ + +V A+D D     +V  S L G  +  F I+ +  +   +  L   +
Sbjct: 611 --VENVAIGTPVTQVTASDLDSSLNGKVLFSILGGNSDGKFVIDQNTGVVTTNKSLDYED 668

Query: 209 TSTIQLVVVATDTGNPPRQASVPAIMH 235
            +   LV+ ATD G+PP  +S P ++H
Sbjct: 669 VTEYTLVIQATDCGDPPLNSSQPGMLH 695



 Score = 51.6 bits (122), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 66/232 (28%), Positives = 101/232 (43%), Gaps = 25/232 (10%)

Query: 15  VRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVT-----T 69
           VRA    +  R A+AT+ V    T+     F   EY     EN P+  ++  V      +
Sbjct: 79  VRAEDRGSPIRSAIATIHVQITDTNDNRPIFQPMEYETRVSENTPLGTIVARVKAVDKDS 138

Query: 70  NKPRDLRVKYWLSNDYGERFSISRQ-GDISLMQCLDYETEDSYRFTVYATDTLMTTSATV 128
               DL       N+ G  F+I    G+I   +  D+E  + Y  T+  +DT +   +++
Sbjct: 139 TSNADLIYSIQNGNNNGS-FTIDNSTGEIMTRKEFDFEKTERYNLTISVSDTGVPALSSL 197

Query: 129 N-----ISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSL 183
           N     I VV+ ND  P F   +Y   +      + T G+V+ +V A D D G    L  
Sbjct: 198 NFANVVIIVVDENDNPPEFAQKRYTATV----YENFTVGTVVLRVTAHDKDSGPNAMLKY 253

Query: 184 ---RGPYEKMFS-INDSGHISIVDLSALNTSTIQ---LVVVATDTGNPPRQA 228
               G  +  F  I DSG IS+     L+  TI+   LV++ TD G PP ++
Sbjct: 254 SIHSGNTDDAFVIIADSGDISL--DKPLDKETIENYTLVLIVTDMGIPPLES 303



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 45/159 (28%), Positives = 74/159 (46%), Gaps = 15/159 (9%)

Query: 88  RFSISRQ-GDISLMQCLDYETEDSYRFTVYATDTL-----MTTSATVNISVVNVNDWDPR 141
           +F I +  G ++  + LDYE    Y   + ATD        +    +++SVVN+ND  P 
Sbjct: 648 KFVIDQNTGVVTTNKSLDYEDVTEYTLVIQATDCGDPPLNSSQPGMLHVSVVNINDNSPV 707

Query: 142 FRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLS-LRGPYEKMFSINDSGH 198
           F    Y   +      + T G VI +V A+D D     +V  S L G  +  F ++ +  
Sbjct: 708 FSQKMYSASIDE----NTTVGHVILRVTASDLDSSLNGKVLFSILEGNSDGKFVVDQNTG 763

Query: 199 ISIVD--LSALNTSTIQLVVVATDTGNPPRQASVPAIMH 235
           +   +  L   + +   LV+ ATD G+PP  +S P ++H
Sbjct: 764 VVTTNKSLDYEDVTEYTLVIQATDCGDPPLNSSQPGMLH 802



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 50/172 (29%), Positives = 83/172 (48%), Gaps = 19/172 (11%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTTNKPR---DLRVKYWL-SNDYGERFSI-SRQGDIS 98
           +F++  Y+ +  EN  V  V+L VT +      +  +KY + S +  + F I +  GDIS
Sbjct: 215 EFAQKRYTATVYENFTVGTVVLRVTAHDKDSGPNAMLKYSIHSGNTDDAFVIIADSGDIS 274

Query: 99  LMQCLDYETEDSYRFTVYATDTLM-----TTSATVNISVVNVNDWDPRFRYPQYELFLP- 152
           L + LD ET ++Y   +  TD  +          VN+ V  VN+  PRF    Y   +P 
Sbjct: 275 LDKPLDKETIENYTLVLIVTDMGIPPLESIKRMVVNVIVSGVNEHAPRFLNEFYNASIPE 334

Query: 153 HIPLADLTPGSVIGKVEAADGD--KGDRVTLSLR-GPYEKMFSINDSGHISI 201
           ++PL     G+ I +V A + D   G R    ++     K+F +N +G I++
Sbjct: 335 NLPL-----GTSIVRVRAVEDDVSVGARFIYVIKDAASSKVFLVNQTGDITL 381



 Score = 42.4 bits (98), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 54/198 (27%), Positives = 89/198 (44%), Gaps = 26/198 (13%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWL-----SNDYGERFSISR-QG 95
           F++  YS    E+  V   LLTV     +   + RV Y +      +DY   F I    G
Sbjct: 3   FNQTLYSAIIPEDFTVGGTLLTVLARDQDAALNARVTYSIVSFSTESDY---FVIDNITG 59

Query: 96  DISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLP 152
            +   +  DYET+  Y F+V A D    + +  AT+++ + + ND  P F+  +YE    
Sbjct: 60  VVRSSKEFDYETQRMYSFSVRAEDRGSPIRSAIATIHVQITDTNDNRPIFQPMEYE---- 115

Query: 153 HIPLADLTP-GSVIGKVEAADGD---KGDRVTLSLRGPYEKMFSI-NDSGHI-SIVDLSA 206
              +++ TP G+++ +V+A D D     D +     G     F+I N +G I +  +   
Sbjct: 116 -TRVSENTPLGTIVARVKAVDKDSTSNADLIYSIQNGNNNGSFTIDNSTGEIMTRKEFDF 174

Query: 207 LNTSTIQLVVVATDTGNP 224
             T    L +  +DTG P
Sbjct: 175 EKTERYNLTISVSDTGVP 192


>gi|118090437|ref|XP_420680.2| PREDICTED: protocadherin Fat 1 [Gallus gallus]
          Length = 4590

 Score = 65.9 bits (159), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 62/202 (30%), Positives = 102/202 (50%), Gaps = 20/202 (9%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDL----RVKYWLSNDYG-ERFSISRQGDISL 99
            FS+NEY V   EN P+ + L+TV   +  D      + Y + ND+  +RF IS +G I  
Sbjct: 2493 FSQNEYEVELAENAPL-HTLVTVVRARDEDSGTYGHITYHIINDFAKDRFYISERGQIFT 2551

Query: 100  MQCLDYET--EDSYRFTVYATDTLMTTS-ATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
             + LD ET  E     ++ A D+    +  TVN+ + + ND  P+FR  +YE+ +     
Sbjct: 2552 SEKLDRETQAEKVIAISLMAKDSGGKVAFCTVNVILTDDNDNAPQFRATEYEVNIG---- 2607

Query: 157  ADLTPGSVIGKVEAADGDKGDR--VTLSLRGPYEKM---FSIND-SGHISIVD-LSALNT 209
            +D+  G+ + KV A+D D+G    +T ++    E +     I+  SG I+  + L  L  
Sbjct: 2608 SDVPRGTSVIKVWASDADEGTNADITYTIEAESENVKENLEIDSLSGIITTKESLIGLEN 2667

Query: 210  STIQLVVVATDTGNPPRQASVP 231
              +   V A D G+P +++ VP
Sbjct: 2668 EFLTFFVRAVDGGSPQKESVVP 2689



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/147 (26%), Positives = 74/147 (50%), Gaps = 11/147 (7%)

Query: 43   LQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWL---SNDYGERFSISR-QGDIS 98
            + F +  +S + +E+ PV +++  +       L +  W      +Y  RF + +  G I 
Sbjct: 1357 IYFEEEFFSFTVMESDPVAHMIGVIAVEP---LGIPLWFDITGGNYDSRFDVDKGTGTII 1413

Query: 99   LMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLAD 158
            + + LD E + +Y  TV ATD   + S  V I V++ N+  P+F   +YE+ +P     D
Sbjct: 1414 VARPLDAEQKSNYNLTVEATDGTRSISTQVYIKVIDTNNHRPQFSASKYEVVIPE----D 1469

Query: 159  LTPGSVIGKVEAADGDKGDRVTLSLRG 185
              P + I +V A D D+ +++  +++G
Sbjct: 1470 TVPETEILQVSATDRDEKNKLIYTMQG 1496



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 65/243 (26%), Positives = 111/243 (45%), Gaps = 23/243 (9%)

Query: 1    DINEDDFLQPITLVVRAIQY------DNQDRYALATLIVSKAGTSLRELQFSKNEYSVSA 54
            D  E   L P+    +A+ Y      D   R+  A +I++    +    +F+ + YS++ 
Sbjct: 3076 DTGELKTLMPLDREQQAVYYLLVKATDGGGRFCQANIILTLEDVNDNAPEFTVDPYSITV 3135

Query: 55   LENLPVNYVLLTVT---TNKPRDLRVKYWLSNDYGERFSISR-QGDISLMQCLDYETEDS 110
             EN     +L  V     +   + ++ Y L N    +FSI    G I L + LD E +  
Sbjct: 3136 FENTEPKTLLTRVQATDADAGMNRKIHYSLVNSAEGQFSIDEFSGIIRLEKPLDRELQAV 3195

Query: 111  YRFTVYATDT----LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIG 166
            Y  T+ ATD      +++++ + +SV+++ND  P F Y +Y   +      D   G+ + 
Sbjct: 3196 YTLTLRATDEGLPRRLSSTSNLIVSVLDINDNPPVFEYREYSASVSE----DTVVGTEVL 3251

Query: 167  KVEAA--DGDKGDRVTLSL-RGPYEKMFSIND-SGHISIVD-LSALNTSTIQLVVVATDT 221
            ++ AA  D +    +T S+  G     FSI+  +G I I+D L   ++    L V ATD 
Sbjct: 3252 QIHAASRDIEANAEITYSIVSGNEHGKFSIDSTTGAIFIIDSLDYESSHEYYLTVEATDG 3311

Query: 222  GNP 224
            G P
Sbjct: 3312 GTP 3314



 Score = 55.1 bits (131), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 70/259 (27%), Positives = 117/259 (45%), Gaps = 26/259 (10%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLS------NDYGERFSI-SRQGDI 97
            F   EYS S  E+  V   +L +     RD+     ++      N++G +FSI S  G I
Sbjct: 3231 FEYREYSASVSEDTVVGTEVLQIHA-ASRDIEANAEITYSIVSGNEHG-KFSIDSTTGAI 3288

Query: 98   SLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHI 154
             ++  LDYE+   Y  TV ATD     ++   TVNI+V ++ND  P F    Y   +   
Sbjct: 3289 FIIDSLDYESSHEYYLTVEATDGGTPSLSDVVTVNINVTDINDNTPVFSQDTYTAVISED 3348

Query: 155  PLADLTPGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSINDS-GHISIVD-LSALNTST 211
             + + +  +V+   + ADG   + +  ++  G     F+I+ S G I +   L     S 
Sbjct: 3349 AVLEQSVITVMA--DDADGPSNNHIHYTITDGNQGNPFTIDPSRGEIKVTKLLDREKISG 3406

Query: 212  IQLVVVATDTGNPPRQASVPAIMHFPEAIVQQASSKLNSGTSSTVLIILGVVLIVLGFVI 271
              L V A+D G+PPR+ +    +   +  V       + G  S ++     V    GF +
Sbjct: 3407 YTLTVQASDNGSPPRRNTTTVNIDVSD--VNDNPPVFSKGNYSIIIQENKPV----GFSV 3460

Query: 272  ILLILYIHKNKHTKNNGPP 290
            + L++    +K + +NGPP
Sbjct: 3461 LQLVV---TDKDSSHNGPP 3476



 Score = 54.7 bits (130), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 52/199 (26%), Positives = 92/199 (46%), Gaps = 16/199 (8%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTTN----KPRDLRVKYWLSN-DYGERFS---ISRQG 95
            +F+   Y  +  E+ P   ++  ++T     K  + +V Y+++  D   +F+   I  + 
Sbjct: 2918 RFTAEIYKGTVSEDDPPGGIIAILSTTDADTKEVNRQVSYYITGGDLLGQFAVENIQNEW 2977

Query: 96   DISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIP 155
             + + + LD E +D Y   + ATD    T A V + V++ ND  P      Y   +P   
Sbjct: 2978 KVYVKKPLDREEKDHYLLNITATDGTFATRAVVEVKVLDANDNSPVCEKALYTDTVPE-- 3035

Query: 156  LADLTPGSVIGKVEAADGD--KGDRVTLSLRGPYEKMFSIN-DSGHI-SIVDLSALNTST 211
              D  PG +I +V A D D      +T +L GP  + F +  D+G + +++ L     + 
Sbjct: 3036 --DALPGKLIMQVSATDADIRSNAEITYTLHGPGAEKFRLTADTGELKTLMPLDREQQAV 3093

Query: 212  IQLVVVATDTGNPPRQASV 230
              L+V ATD G    QA++
Sbjct: 3094 YYLLVKATDGGGRFCQANI 3112



 Score = 51.6 bits (122), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 48/161 (29%), Positives = 74/161 (45%), Gaps = 12/161 (7%)

Query: 45   FSKNEYSVSALENLPVNY-VLLTVTTNKPRDLRVKYWL----SNDYGERFSISRQGDISL 99
            FSK  YS+   EN PV + VL  V T+K        +L    S +    F ++ QG ++ 
Sbjct: 3441 FSKGNYSIIIQENKPVGFSVLQLVVTDKDSSHNGPPFLFTILSGNEENTFQVNHQGVLTT 3500

Query: 100  MQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
               L+ +  D Y   V  TD     +++   V+I V+  + + P       E+F+     
Sbjct: 3501 TAALNRKLRDHYLLHVKVTDNGKPPLSSLTYVDIRVIEESIYPPAIL--PLEIFI--TAF 3556

Query: 157  ADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSG 197
             +   G VIGK+ A D D  D +T SL    E MFS++ +G
Sbjct: 3557 GEEYSGGVIGKIHATDQDVYDTLTYSLDPKMESMFSVSSTG 3597



 Score = 51.2 bits (121), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 56/197 (28%), Positives = 91/197 (46%), Gaps = 25/197 (12%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSN-DYGERFSIS-RQGDISLMQC 102
            F K  YS    EN+ ++  ++ V  N P  L+V Y +++ D   +F I+   G I+++  
Sbjct: 2183 FEKPFYSAEIPENIQLHSPVVHVQANSPEGLKVFYSITDGDPFNQFMINFNTGVINVVAP 2242

Query: 103  LDYETEDSYRFTVYATDTLMTTSATVNISVV--NVNDWDPRFRYPQYELFLPHIPLADLT 160
            LD+E+  +Y+  + ATD+L    A V + ++  ++ND  P F    Y +         L+
Sbjct: 2243 LDFESHPAYKLNIRATDSLTGAHADVFVDIIVEDINDNAPVFTEQSYAV--------TLS 2294

Query: 161  PGSVIG----KVEAADGDKGDRVTLSLR-----GPYEKMFSINDSGHISIVDLSALNTST 211
              SVIG    +V A D D G    +S             F I+ S  + I+   AL+   
Sbjct: 2295 EASVIGTPVVQVSATDADSGTNRGISYHLVEDDTESHDYFHIDSSTGL-ILTTRALDYEK 2353

Query: 212  IQ---LVVVATDTGNPP 225
            IQ   L++ A D G  P
Sbjct: 2354 IQQHKLLIRAVDGGMLP 2370



 Score = 46.6 bits (109), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 49/173 (28%), Positives = 79/173 (45%), Gaps = 24/173 (13%)

Query: 19   QYDNQDRYALATLIVSKAGTSLRELQ--FSKNEYSVSALENLPVNYVLLTVTTNKPRDL- 75
            QY N+D   ++++ VS       + +     N Y    +EN+P    ++ V   K  DL 
Sbjct: 2782 QYTNEDYNVISSVEVSIQVKDANDNKPVLESNPYEAFIVENMPAGTRVIQV---KGTDLD 2838

Query: 76   -----RVKYWLSN----DYGERFSISRQ-GDISLMQCLDYETEDSYRFTVYATDT----L 121
                 +V Y L      D  E F+I+ + G I+ ++ LD+E  D Y+ TV A D      
Sbjct: 2839 SGLNGQVTYSLDPSQELDIIESFAINMETGWITTLKELDHEMRDKYKITVVAADRGEKIQ 2898

Query: 122  MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGD 174
            +++ A V ++V +VND  PRF    Y+  +      D  PG +I  +   D D
Sbjct: 2899 LSSLAVVEVTVTDVNDNPPRFTAEIYKGTVSE----DDPPGGIIAILSTTDAD 2947



 Score = 46.6 bits (109), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 63/247 (25%), Positives = 111/247 (44%), Gaps = 24/247 (9%)

Query: 4    EDDFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYV 63
            E++FL   T  VRA+   +  + ++  +        +   +FS+  YS    E++PV   
Sbjct: 2666 ENEFL---TFFVRAVDGGSPQKESVVPVYARILPPEVSLPKFSEPFYSYMVSEDIPVGTE 2722

Query: 64   LLTVTTNKPRDLRVKYWLSN----DYGERFSISRQ-GDISLMQCLDYETEDSYRFTVYA- 117
            +  +     + L       N    +    F I RQ G + L + LD+ET   Y+F+V A 
Sbjct: 2723 IDVIKAEHNQTLVYSLIKGNTPESNRDNFFVIDRQTGKLKLEKNLDHETTKWYQFSVLAQ 2782

Query: 118  ---TDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGD 174
                D  + +S  V+I V + ND  P      YE F+    + ++  G+ + +V+  D D
Sbjct: 2783 YTNEDYNVISSVEVSIQVKDANDNKPVLESNPYEAFI----VENMPAGTRVIQVKGTDLD 2838

Query: 175  KG--DRVTLSLRGPYE----KMFSIN-DSGHISIV-DLSALNTSTIQLVVVATDTGNPPR 226
             G   +VT SL    E    + F+IN ++G I+ + +L        ++ VVA D G   +
Sbjct: 2839 SGLNGQVTYSLDPSQELDIIESFAINMETGWITTLKELDHEMRDKYKITVVAADRGEKIQ 2898

Query: 227  QASVPAI 233
             +S+  +
Sbjct: 2899 LSSLAVV 2905



 Score = 43.9 bits (102), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 58/215 (26%), Positives = 89/215 (41%), Gaps = 19/215 (8%)

Query: 24  DRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLR---VKYW 80
           DR A A +++   G +    +F++  Y  S  EN+P+   ++ V+   P +     V Y 
Sbjct: 443 DRRASAKVLIKVLGMNSNPPEFTQTAYKASFDENVPIGTSVMRVSAKDPDEGENGYVTYS 502

Query: 81  LSNDYGERFSISR-QGDISLMQCLDYE-TEDSYRFTVYATDTLMTTSATVNISVV----N 134
           ++N     F I+   G IS  + LDYE     Y   + A+D  +     V + V     N
Sbjct: 503 IANLNPLPFVINHFSGIISTSEDLDYELMPRVYNLRIRASDWGVPYRREVEVPVTIILNN 562

Query: 135 VNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYE-KMFSI 193
           +ND  P F     E  +P     DL  G  I  V A D D+   V   +    E  +FS+
Sbjct: 563 LNDNIPLFEKINCEGTIPR----DLGVGEQITTVSAIDADELQLVRYQIESGNELDLFSL 618

Query: 194 NDSGHI-----SIVDLSALNTSTIQLVVVATDTGN 223
           N +  +     S+ D      S   L + ATD  N
Sbjct: 619 NPNSGVLSLKQSLTDGPGAKMSFHSLKITATDGEN 653



 Score = 43.5 bits (101), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 54/196 (27%), Positives = 90/196 (45%), Gaps = 22/196 (11%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTTNKPRDL----RVKYWLSNDYGERFSISR-QGDIS 98
            +F ++ Y V   EN  ++  ++ +     +DL     VKY L  D  ++F+I+   G + 
Sbjct: 822  EFLQDSYFVEVSENKELDSEIIQIEATD-KDLGANGEVKYSLLTD-TDKFAINAVTGVVK 879

Query: 99   LMQCLDYETEDSYRFTVYATDT-----LMTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
            ++  LD+E +  Y   + A D       + ++  + +S+ +VND  P+F    Y     H
Sbjct: 880  VVGLLDHEEQHIYFLKIEARDQPTEEPQLFSTVILKVSIEDVNDNPPKFIPSNY-----H 934

Query: 154  IPL-ADLTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSIND-SGHISIVD-LSALN 208
            + +  DL  G++I  +EA D D G   +V  SL    +  F ++  SG I IV  L    
Sbjct: 935  VKIREDLPEGTIITWLEAYDPDVGQSSQVRYSLLDSGDGTFDVDKLSGAIRIVQRLDYEK 994

Query: 209  TSTIQLVVVATDTGNP 224
                 L V A D G P
Sbjct: 995  KQLYNLTVRAKDKGKP 1010



 Score = 39.7 bits (91), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 56/198 (28%), Positives = 88/198 (44%), Gaps = 29/198 (14%)

Query: 56   ENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGER-FSISRQ-GDISLMQCLDYETEDS 110
            E+ P+   ++TV+    ++ RD  ++Y + +  G   F I  + G I     LD ET   
Sbjct: 1046 EDAPIGSSVMTVSAYDEDEGRDGEIRYSIRDGSGMGVFRIDEEKGIIETADHLDRETTSH 1105

Query: 111  YRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGK 167
            Y  TVYATD     +++   + I V +VND  P+   P   ++ P +        SVI +
Sbjct: 1106 YWLTVYATDQGVVPLSSFIEIYIEVGDVNDNAPQTTEP---VYYPEVMENSPKDVSVI-Q 1161

Query: 168  VEAADGDKGDRVTLSLRGPYEKMFSINDSGHISIVDLSALNTSTIQ-----------LVV 216
            +EA D D      L+      K+ S N  G  SI   + L T+T +           L V
Sbjct: 1162 IEAFDPDSSSSEKLTY-----KITSGNPQGFFSINPKTGLITTTSRKLDREQQAEHILEV 1216

Query: 217  VATDTGNPPRQASVPAIM 234
              TD G  P Q++V  ++
Sbjct: 1217 TVTDNG-IPAQSTVARVI 1233



 Score = 39.7 bits (91), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 53/196 (27%), Positives = 82/196 (41%), Gaps = 18/196 (9%)

Query: 44   QFSKNEYSVSALEN-LPVNYVLLTVTTNKPRDLRVKYWLSNDYG----ERFSIS-RQGDI 97
            QFS ++Y V   E+ +P   +L    T++    ++ Y +         ++F +    G +
Sbjct: 1456 QFSASKYEVVIPEDTVPETEILQVSATDRDEKNKLIYTMQGSTDPISLKKFRLDPGTGSL 1515

Query: 98   SLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHI 154
               + LD+ET + +  TV   D    +    A V I+V + ND  P F    YE  +   
Sbjct: 1516 YTTEKLDHETMNQHILTVMVRDQDVPVKRNYARVIINVSDTNDHAPWFTSSSYEGRV--- 1572

Query: 155  PLADLTPGSVIGKVEAADGDKGDRVTLSLR---GPYEKMFSINDS-GHISIV-DLSALNT 209
                   GS + +V A D DKG    +      G     F I+   G I I  +L   N 
Sbjct: 1573 -YESAAVGSAVLQVTALDKDKGKNAEIVYSIESGNIGNSFMIDPILGMIKIAKELDHSNQ 1631

Query: 210  STIQLVVVATDTGNPP 225
                L+V ATD G+PP
Sbjct: 1632 EEYNLMVKATDKGDPP 1647


>gi|301767532|ref|XP_002919186.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin-7-like [Ailuropoda
           melanoleuca]
          Length = 1207

 Score = 65.9 bits (159), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 62/203 (30%), Positives = 92/203 (45%), Gaps = 21/203 (10%)

Query: 37  GTSLRELQFSKNEYSVSALENLPVNYV--LLTVTTNKPRDLRVKYWLSNDYGERFSIS-R 93
           G S+ E+ F +N        N+P   V  +L    +  ++  + Y L +     F+I   
Sbjct: 488 GQSVVEVYFPEN--------NIPGERVATVLATDADSGKNAEIAYSLDSSVLGIFAIDPD 539

Query: 94  QGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELF 150
            GDI +   LD E  D Y F V A D    ++  S TV + V + ND DP+F    +  +
Sbjct: 540 SGDILVNTVLDREQTDRYEFKVNAKDKGIPVLQGSTTVIVQVADKNDNDPKFMQDVFTFY 599

Query: 151 LPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSI-NDSGHI-SIVDLSAL 207
           +      +L P S +G V   D DKG    +SL       +FSI ND+G I S +     
Sbjct: 600 VKE----NLQPNSPVGMVTVMDADKGRNAEMSLYIEENSNIFSIENDTGTIYSTMSFDRE 655

Query: 208 NTSTIQLVVVATDTGNPPRQASV 230
           + +T    V A D G+PPR A+ 
Sbjct: 656 HQTTYTFRVKAVDGGDPPRSATA 678



 Score = 45.1 bits (105), Expect = 0.054,   Method: Compositional matrix adjust.
 Identities = 77/316 (24%), Positives = 136/316 (43%), Gaps = 46/316 (14%)

Query: 30  TLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVT---TNKPRDLRVKYWLSNDYG 86
           T+IV  A  +  + +F ++ ++    ENL  N  +  VT    +K R+  +  ++  +  
Sbjct: 576 TVIVQVADKNDNDPKFMQDVFTFYVKENLQPNSPVGMVTVMDADKGRNAEMSLYIEEN-S 634

Query: 87  ERFSISRQ-GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRF 142
             FSI    G I      D E + +Y F V A D      + +ATV++ V++ ND  P  
Sbjct: 635 NIFSIENDTGTIYSTMSFDREHQTTYTFRVKAVDGGDPPRSATATVSLFVMDENDNAPTV 694

Query: 143 RYPQ---YELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIND- 195
             P+   Y L  P   +      +V+  V A D D G    L+   + G   K+F I+  
Sbjct: 695 TLPRNISYTLLPPSSNVR-----TVVATVLATDSDDGINADLNYSIVGGNPFKLFEIDST 749

Query: 196 SGHISIV-DLSALNTSTIQLVVVATDTGNPPRQASVPAIMHFPEA------IVQQASSKL 248
           SG +S+V  L+  +    +LVV   D+G P +  +    +   E+      I  Q +  L
Sbjct: 750 SGVVSLVGKLTQKHYGLHRLVVQVNDSGQPSQSTTTLVHVFVNESVSNATVIDSQIARSL 809

Query: 249 NSGTSSTVL-------------IILGVVLIVLGFVIILLILYIHKNKHTKN-NGPPGSSH 294
           ++  +  +              I++GVV  ++  ++I+LI+ + +   +KN NG      
Sbjct: 810 HTPLTQDIAGDPSYEISKQRLSIVIGVVAGIMTVILIILIVVMARYCRSKNKNGYEAGKK 869

Query: 295 SKNDSFLSNVILPEKH 310
              D F      P++H
Sbjct: 870 DHEDFF-----TPQQH 880



 Score = 43.1 bits (100), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 41/160 (25%), Positives = 72/160 (45%), Gaps = 26/160 (16%)

Query: 93  RQGDISLMQCLDYETEDSYRFTVY---ATDTLMTTSATVNISVVNVNDWDPRFRYPQYEL 149
           +Q  + +   LD E  DSY  T+      D   ++ A + + + +VND  PRF    YE 
Sbjct: 209 KQPQLIVKGALDREQRDSYELTLRVRDGGDPPRSSQAILRVLITDVNDNSPRFEKSVYEA 268

Query: 150 FLPHIPLADLTPGSVIGKVEAADGDKG---------DRVTLSLRGPYEKMFSIND-SGHI 199
            L      +  PG+ I ++ AAD D G            T S+R    ++  +++ SG +
Sbjct: 269 DLAE----NSAPGTPILQLRAADLDVGVNGQIEYVFGAATESVR----RLLRLDETSGWL 320

Query: 200 SI---VDLSALNTSTIQLVVVATDTGNPPRQASVPAIMHF 236
           S+   +D   +N   ++  V+A D G PP+      +++ 
Sbjct: 321 SVLHRIDREEVN--QLRFTVMARDRGQPPKTDKATVVLNI 358


>gi|300796778|ref|NP_001179501.1| protocadherin Fat 2 precursor [Bos taurus]
          Length = 4347

 Score = 65.9 bits (159), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 56/206 (27%), Positives = 95/206 (46%), Gaps = 21/206 (10%)

Query: 43   LQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGER---FSISRQ-GDIS 98
            L F ++ YS + +E  PVN+++  ++      L   +W S   G++   F I +  G I 
Sbjct: 1343 LAFDESHYSFTVMETDPVNHMVGVISVEGRPGL---FWFSISGGDKDMDFDIEKTTGSIV 1399

Query: 99   LMQCLDYETEDSYRFTVYATDTLMTTSATVNISVV-NVNDWDPRFRYPQYELFLPHIPLA 157
            + + LD     SY  TV  TD   T +  V I ++ NVN   P+F    YE+ +P     
Sbjct: 1400 IARPLDTRRRSSYNLTVEVTDGFQTIATQVYIVMIANVNHHRPQFLEAHYEVRVPQ---- 1455

Query: 158  DLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSGHISIVDLSALNTSTIQLVVV 217
            D  PG  + +V+A D DKG  +  ++ G         D G  S+  L    +S + + V 
Sbjct: 1456 DTMPGVELLRVQATDQDKGKGLIYTIHGS-------QDPGSASLFQLDP--SSGVLVTVG 1506

Query: 218  ATDTGNPPRQASVPAIMHFPEAIVQQ 243
              D G+ P Q ++  ++   E  +++
Sbjct: 1507 KLDLGSGPSQHTLTVMVRDQEMPIKR 1532



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 41/155 (26%), Positives = 71/155 (45%), Gaps = 23/155 (14%)

Query: 11   ITLVVRAIQYDNQDRYALATLIVSKAGTSLREL---------------QFSKNEYSVSAL 55
            I  V +++ ++   +Y L+     K  +SL ++               +F ++ YS   L
Sbjct: 3270 ILYVNKSLDFETSPKYFLSVECSRKGSSSLSDMTTIVVNITDINEHRPRFPQHLYSTRVL 3329

Query: 56   ENLPVNYVLLTVTT---NKPRDLRVKYWL--SNDYGERFSISRQGDISLMQCLDYETEDS 110
            EN  V  V+LTV+    + P +  + Y L   N  G      ++G++ + + LD+E   S
Sbjct: 3330 ENAIVGDVVLTVSATDEDGPVNSAITYSLIGGNQLGHFAIHPKKGELQVAKALDWEQTSS 3389

Query: 111  YRFTVYATDT---LMTTSATVNISVVNVNDWDPRF 142
            Y   + ATD+    +     + I VV+VND  PRF
Sbjct: 3390 YSLKLRATDSGQPALYEDTDIAIQVVDVNDNPPRF 3424



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 57/198 (28%), Positives = 91/198 (45%), Gaps = 24/198 (12%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGER-----FSISRQ-GDI 97
            QFS+  Y+ SA E+LP    + +V     +D  +   +     E      FS+ +  G +
Sbjct: 2687 QFSEPLYTFSASEDLPEGSEIGSVKAVAGQDPVIYSLVQGTTPESNKDGIFSLDQNTGVL 2746

Query: 98   SLMQCLDYETEDSYRFTVYA----TDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
             + + +DYE+   Y+  + A     DT + +  +VNI V +VND  P F    Y+  L  
Sbjct: 2747 KVRKAMDYESTKWYQIDLMAHCPHNDTYLGSLVSVNIQVKDVNDNRPIFEADPYKAVL-- 2804

Query: 154  IPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYE------KMFSINDSGHISIVDLSAL 207
                ++  G+ + +V A D D GD   +S R P +      ++F+I DS    I  L  L
Sbjct: 2805 --TENMPVGTSVIQVTANDQDTGDDGQVSYRLPVDPGSNIHELFAI-DSETGWITTLQEL 2861

Query: 208  NTSTIQL---VVVATDTG 222
            +  T Q+    VVA D G
Sbjct: 2862 DCETNQIYHFYVVAYDHG 2879



 Score = 47.0 bits (110), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 70/229 (30%), Positives = 96/229 (41%), Gaps = 25/229 (10%)

Query: 13   LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENL--PVNYVLLTVTTN 70
            L++RA     QD    A + +S    S   LQF ++ Y  +  ENL      V+L    N
Sbjct: 1935 LIIRASDGLYQD---TALVKISWTQASNTTLQFDRDVYRATVKENLLERKALVILGAQGN 1991

Query: 71   KPRDLRVKYWLSNDYGERFSISRQGDISLMQC-LDYETEDSYRFTVYATDTLM---TTSA 126
               D  + Y+L N       I   G +       D E +D++   V   D         A
Sbjct: 1992 HLNDT-LSYFLLNGTDMFHMIKSAGVLQTRGVGFDREQQDTHEVAVELRDNRTPQRVAQA 2050

Query: 127  TVNISVVNVNDWDPRFRYPQYELFLPHIPLADLT-PGSVIGKVEAADGDKG--DRVTLSL 183
             V +SV +VND  P F++  Y     H  + D T PG V+ +V A D D G    VT + 
Sbjct: 2051 LVRVSVEDVNDNSPEFKHLPY-----HTIIQDGTEPGDVLFQVSATDQDLGVNGAVTYAF 2105

Query: 184  RGPYEKMFSINDS-GHISI---VDLSALNTSTIQLVVVATDTGNPPRQA 228
               Y   F I+   G IS+    D  ALN    +L V+A D G P  QA
Sbjct: 2106 AEDY-TYFRIDPYLGDISLRKPFDYQALN--KYRLKVIAQDGGTPSLQA 2151



 Score = 45.8 bits (107), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 55/192 (28%), Positives = 84/192 (43%), Gaps = 15/192 (7%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGERFSIS--RQGDISLMQC 102
            F    Y V   EN+ +   +L      P  LR+ Y +  +       +  + G +++   
Sbjct: 2167 FQTPYYKVRVPENITLYTPILHTQARSPEGLRLIYNIVEEEPLMLFTTDFKTGVLTVTGP 2226

Query: 103  LDYETEDSYRFTVYATDTLMT--TSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLT 160
            LDYE++  + FTV ATDT +   + ATV + V +VND  P F    Y   +    L   T
Sbjct: 2227 LDYESKTKHVFTVRATDTALGSFSEATVEVLVEDVNDNPPTFSQLVYTTSISE-GLPAQT 2285

Query: 161  PGSVIGKVEAADGDKGDRVTLSLR-----GPYEKMFSINDS-GHISIV-DLSALNTSTIQ 213
            P   + ++ A+D D G    +S +         K F IN S G +S V +L         
Sbjct: 2286 P---VIQLLASDQDSGQNRDVSYQIVEDGSDVSKFFQINGSTGEMSTVQELDYEAQQHFH 2342

Query: 214  LVVVATDTGNPP 225
            + V A D G+PP
Sbjct: 2343 VKVRAMDRGDPP 2354



 Score = 45.1 bits (105), Expect = 0.056,   Method: Compositional matrix adjust.
 Identities = 40/133 (30%), Positives = 71/133 (53%), Gaps = 14/133 (10%)

Query: 95   GDISLMQCLDYETEDSYRFTVYATDT-----LMTTSATVNISVVNVNDWDPRFRYPQYEL 149
            G ++ +  +DYE+  S+RF +Y  D          +A V I+V NVND  PRF    YE+
Sbjct: 1816 GTLTTVLEMDYESMPSFRFDIYVHDQGSPILFAPRAAQVIINVRNVNDCPPRFLDQIYEV 1875

Query: 150  FLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSIND-SGHISIVDLSAL 207
             +    +  +  G  +  V+A+D D    VT S++ G  ++  +++  +G IS++D + L
Sbjct: 1876 AI----MKPIHRGMELLMVQASDDDS--EVTYSIKTGNADEAIAMHPITGRISVLDPTLL 1929

Query: 208  NTSTIQLVVVATD 220
              S  +L++ A+D
Sbjct: 1930 GLSR-ELIIRASD 1941



 Score = 44.3 bits (103), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 57/201 (28%), Positives = 82/201 (40%), Gaps = 20/201 (9%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTT------NKPRDLRVKYWLSNDYGERFSISRQGD- 96
            +F+  +Y  S +EN      + T+ T       + R +   Y    D   +F IS+ GD 
Sbjct: 2903 RFASEDYRGSVVENSEPGEPVATLKTLDADIAEQNRQVTC-YITEGDPLGQFGISQVGDE 2961

Query: 97   --ISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHI 154
              I   + LD E    Y   + A+D     S  V I V+++ND  P+      +L     
Sbjct: 2962 WRIFSRKTLDREHTAKYLLRITASDGKFQASVPVEIFVLDINDNSPQCS----QLLYTGK 3017

Query: 155  PLADLTPGSVIGKVEAA--DGDKGDRVTLSLRGPYEKMFSINDSGHISIVDLSALNTS-- 210
               D+ P   I KV A   D D   ++T SL GP    F + D     +  L+AL+    
Sbjct: 3018 VSEDVPPEHFILKVSATDLDSDTNAQITYSLHGPGADEFKL-DPHTGDLTTLTALDREKK 3076

Query: 211  -TIQLVVVATDTGNPPRQASV 230
                LV  ATD G    QA V
Sbjct: 3077 DVYSLVAKATDGGGQSCQADV 3097



 Score = 43.1 bits (100), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 47/145 (32%), Positives = 70/145 (48%), Gaps = 15/145 (10%)

Query: 95   GDISLMQCLDYETEDSYRFTVYATD----TLMTTSATVNISVVNVNDWDPRFRYPQYELF 150
            G ++  + LD E +D +   V   D    +L +TS  V + + +VND  P F +  + + 
Sbjct: 1188 GLLATARQLDRENKDEHILEVTVLDNGEPSLRSTSRVV-VRIADVNDNPPVFSHKLFNVR 1246

Query: 151  LPHIPLADLTPGSV--IGKVEAADGDKG--DRVTLSLRGPYEKMFSIND-SGHISIVDLS 205
            LP      L PG+   + ++ A+D D+G   RVT S+    E  FSI+  +G +S     
Sbjct: 1247 LPE----RLNPGTSGPVYRLVASDLDEGLNGRVTYSIEESDEAGFSIDPVTGVVSASSTF 1302

Query: 206  ALNTSTIQLVVVATDTGNPPRQASV 230
                  I L V ATD G PP  ASV
Sbjct: 1303 TAGEYNI-LTVKATDGGQPPLSASV 1326



 Score = 42.4 bits (98), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 53/185 (28%), Positives = 88/185 (47%), Gaps = 19/185 (10%)

Query: 56   ENLPVNYVLLTVTTNKPRDL----RVKYWLSNDYGERFSIS-RQGDISLMQCLDYETEDS 110
            E+LP   +L  +  + P DL     V+Y L +D    F ++   G +SL + LD+E    
Sbjct: 932  EDLPPATILTFLDASDP-DLGPAGEVQYVLLDDAHGTFHVNPMTGALSLEKELDFERRAG 990

Query: 111  YRFTVYATDT----LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTP-GSVI 165
            Y  +++A+D+       T   V ++V++VN+       P++  F+    + + +P G+ +
Sbjct: 991  YNLSLWASDSGKPLARRTLCHVEVTVLDVNE---NLHPPRFASFVHQGQVQENSPSGTSV 1047

Query: 166  GKVEAADGDKG--DRVTLSLRGPYE-KMFSIN-DSGHI-SIVDLSALNTSTIQLVVVATD 220
              V A D D G    +   LRG      FSIN D+G I ++  L     S   L V+A D
Sbjct: 1048 MVVAAHDDDTGLDGELQYFLRGGTGLAAFSINQDTGMIQTLAPLDREFASCYWLTVLAVD 1107

Query: 221  TGNPP 225
             G+ P
Sbjct: 1108 RGSIP 1112



 Score = 41.6 bits (96), Expect = 0.60,   Method: Compositional matrix adjust.
 Identities = 58/209 (27%), Positives = 97/209 (46%), Gaps = 17/209 (8%)

Query: 28   LATLIVSKAGTSLRELQFSKNEYSVSALENLPVN-YVLLTVTTNKPRDLRVKYWL--SND 84
            L T+ VS  G       F   E+SV   E+      VL   T  +P   +  Y +   N+
Sbjct: 3199 LGTVTVSVVGLEDYLPVFLSTEHSVQVPEDAQRGTEVLRLATLTRPGAEKTGYRVVSGNE 3258

Query: 85   YGERFSI-SRQGDISLMQCLDYETEDSYRFTVYAT---DTLMTTSATVNISVVNVNDWDP 140
             G RF + +R G + + + LD+ET   Y  +V  +    + ++   T+ +++ ++N+  P
Sbjct: 3259 QG-RFRLDARTGILYVNKSLDFETSPKYFLSVECSRKGSSSLSDMTTIVVNITDINEHRP 3317

Query: 141  RFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDK--GDRVTLSLRGPYE-KMFSIN-DS 196
            RF  PQ+ L+   + L +   G V+  V A D D      +T SL G  +   F+I+   
Sbjct: 3318 RF--PQH-LYSTRV-LENAIVGDVVLTVSATDEDGPVNSAITYSLIGGNQLGHFAIHPKK 3373

Query: 197  GHISIVD-LSALNTSTIQLVVVATDTGNP 224
            G + +   L    TS+  L + ATD+G P
Sbjct: 3374 GELQVAKALDWEQTSSYSLKLRATDSGQP 3402



 Score = 38.5 bits (88), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 35/132 (26%), Positives = 60/132 (45%), Gaps = 1/132 (0%)

Query: 12   TLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNK 71
            TL V+A    +   + LAT+I+    +      FS +EY V   E++PV   +L ++   
Sbjct: 1623 TLTVKAEDQGSPQGHDLATVIIHVYPSDSSAPIFSNSEYFVEIPESIPVGSPILLISATS 1682

Query: 72   PRDLRVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDTLMT-TSATVNI 130
              ++  +    N  G     S  G IS  + LD+E   SY+  +  ++   T T   V +
Sbjct: 1683 FSEVTYELREGNKNGVFSMNSYSGLISTQKKLDHEKISSYQLKIRGSNMAGTFTDVMVLV 1742

Query: 131  SVVNVNDWDPRF 142
             +++ ND  P F
Sbjct: 1743 YIIDENDNAPVF 1754



 Score = 37.7 bits (86), Expect = 9.2,   Method: Compositional matrix adjust.
 Identities = 37/114 (32%), Positives = 53/114 (46%), Gaps = 11/114 (9%)

Query: 128  VNISVVNVNDWDPRFRYPQYELFLPHIPLADLT-PGSVIGKVEAADGDKGDRVTLS---L 183
            V+I V + N   PRF    YE       ++D T PG+ + +V A DGD+G    +    L
Sbjct: 1537 VSIHVEDGNLHPPRFTQLHYE-----TRVSDTTVPGAELLQVRAMDGDRGANAEVHYSFL 1591

Query: 184  RGPYEKMFSIND-SGHISIVD-LSALNTSTIQLVVVATDTGNPPRQASVPAIMH 235
            +G  E  F+IN   G I++   L   N +   L V A D G+P        I+H
Sbjct: 1592 KGNSEGFFNINALLGIITLAQKLDQANHARYTLTVKAEDQGSPQGHDLATVIIH 1645


>gi|127139390|ref|NP_001076032.1| protocadherin gamma-A5 precursor [Pan troglodytes]
 gi|62510868|sp|Q5DRB5.1|PCDG5_PANTR RecName: Full=Protocadherin gamma-A5; Short=PCDH-gamma-A5; Flags:
           Precursor
          Length = 931

 Score = 65.9 bits (159), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 62/197 (31%), Positives = 91/197 (46%), Gaps = 23/197 (11%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWLSND---YGERFSI-SRQGDI 97
           F+ +EYSVS  EN+PV   LL +T   P +    ++ Y   N+     E F + S  G+I
Sbjct: 242 FTPSEYSVSVPENIPVGTRLLMLTATDPDEGINGKLTYSFRNEEEKISETFQLDSNLGEI 301

Query: 98  SLMQCLDYETEDSYRFTVYATD-TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
           S +Q LDYE    Y   V A D   +  SA V ++V +VND  P       E+ L  +  
Sbjct: 302 STLQSLDYEESRFYLMEVVAQDGGALVASAKVVVTVQDVNDNAP-------EVILTSLTS 354

Query: 157 A---DLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMF----SINDSGH-ISIVDLSALN 208
           +   D  PG+VI      DGD G+   ++   P    F    S+++  H ++  DL    
Sbjct: 355 SLSEDCLPGTVIALFSVHDGDSGENGEIACSIPRNLPFKLEKSVDNYYHLVTTRDLDREE 414

Query: 209 TSTIQLVVVATDTGNPP 225
           TS   + +   D G PP
Sbjct: 415 TSDYNITLTVMDHGTPP 431



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 74/285 (25%), Positives = 123/285 (43%), Gaps = 48/285 (16%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPR---DLRVKYWLSNDYGERFSISR-------Q 94
           F +  YS S  EN P    + +VT + P    + RV Y L+ D  +   +S         
Sbjct: 452 FPQASYSTSVPENNPRGVSIFSVTAHDPDSGDNARVTYSLAEDTFQGAPLSSYVSINSDT 511

Query: 95  GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFL 151
           G +  ++  DYE     +  V A+D+    ++++ ++++ V++ ND  P   YP     L
Sbjct: 512 GVLYALRSFDYEQLRDLQLWVTASDSGNPPLSSNVSLSLFVLDQNDNTPEILYPA----L 567

Query: 152 P-----HIPLADLT--PGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-DSGHI- 199
           P      + LA  +  PG ++ KV A D D G    LS   L+     +F++   +G + 
Sbjct: 568 PTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYRLLKASEPGLFAVGLHTGEVR 627

Query: 200 ---SIVDLSALNTSTIQLVVVATDTGNPPRQASVPAIM----HFPEAIVQQASSKLNSGT 252
              +++D  AL  S   LVV   D G PP  A+V   +      P+ +    S K     
Sbjct: 628 TARALLDRDALKQS---LVVAVEDHGQPPLSATVTVTVAVADRIPDILADLGSIKTPIDP 684

Query: 253 SSTVLII------LGVVLIVLGFVIILLILYI---HKNKHTKNNG 288
               L +        V  + L FVI+LL+L +   HK++  +  G
Sbjct: 685 EDLDLTLYLVVAVAAVSCVFLAFVIVLLVLRLRRWHKSRLLQAEG 729



 Score = 41.6 bits (96), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 44/141 (31%), Positives = 62/141 (43%), Gaps = 17/141 (12%)

Query: 103 LDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADL 159
           LD E    Y  T+   D     ++T + + + V +VND  P F    Y   +P     + 
Sbjct: 410 LDREETSDYNITLTVMDHGTPPLSTESHIPLKVADVNDNPPNFPQASYSTSVPE----NN 465

Query: 160 TPGSVIGKVEAADGDKGD--RVTLSLR------GPYEKMFSIN-DSGHI-SIVDLSALNT 209
             G  I  V A D D GD  RVT SL        P     SIN D+G + ++        
Sbjct: 466 PRGVSIFSVTAHDPDSGDNARVTYSLAEDTFQGAPLSSYVSINSDTGVLYALRSFDYEQL 525

Query: 210 STIQLVVVATDTGNPPRQASV 230
             +QL V A+D+GNPP  ++V
Sbjct: 526 RDLQLWVTASDSGNPPLSSNV 546


>gi|431896448|gb|ELK05860.1| Cadherin EGF LAG seven-pass G-type receptor 2 [Pteropus alecto]
          Length = 2652

 Score = 65.9 bits (159), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 70/219 (31%), Positives = 101/219 (46%), Gaps = 22/219 (10%)

Query: 25  RYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWL 81
           R ALATL +    T+  +  F + EY  S  ENL V Y +LTV     + P +  + Y L
Sbjct: 50  RSALATLTILVTDTNDHDPVFEQQEYKESLRENLEVGYEVLTVRATDGDAPPNANILYRL 109

Query: 82  SNDYG----ERFSIS-RQGDISLMQCLDYETEDSYRFTVYATDT-----LMTTSATVNIS 131
               G    E F I  R G I     +D E  +SY+ TV A+D        + +A V +S
Sbjct: 110 LEGPGGSPSEAFEIDPRSGVIRTRGPVDREEVESYQLTVEASDQGRDPGPRSATAAVFLS 169

Query: 132 VVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYE 188
           V + ND  P+F   +Y + +      D+TPG+ I +V A+D DKG    +    + G   
Sbjct: 170 VEDDNDNAPQFSEKRYVVQV----REDVTPGAPILRVTASDRDKGSNALVHYSIMSGNAR 225

Query: 189 KMFSIN-DSGHISIVD-LSALNTSTIQLVVVATDTGNPP 225
             F ++  +G + +V  L    T    L V A D G PP
Sbjct: 226 GQFYLDAQTGALDVVSPLDYETTKEYTLRVRAQDGGRPP 264



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 49/171 (28%), Positives = 80/171 (46%), Gaps = 15/171 (8%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGERFSIS---RQGDIS 98
           F    +  + LE++P+ Y++L V     +   + R++Y L+   G  F  +     G IS
Sbjct: 286 FVSTPFQATVLESVPLGYLVLHVQAIDADAGENARLEYRLAG-VGHDFPFTINNGTGWIS 344

Query: 99  LMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIP 155
           +   LD E  D Y F V A D     +T SA+V++++++VND +P F  P+Y + L    
Sbjct: 345 VAAELDREEVDFYSFGVEARDHGTPALTASASVSVTILDVNDNNPTFTQPEYTVRLNE-- 402

Query: 156 LADLTPGSVIGKVEAADGDKGDRVTLSL-RGPYEKMFSINDSGHISIVDLS 205
             D   G+ +  V A D D    +T  +  G     FSI       +V L+
Sbjct: 403 --DAAVGTSVVTVSAVDRDAHSVITYQITSGNTRNRFSITSQSGGGLVSLA 451



 Score = 45.4 bits (106), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 51/189 (26%), Positives = 86/189 (45%), Gaps = 14/189 (7%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRDLR--VKYWL-SNDYGERFSISRQ---GDIS 98
           F++ EY+V   E+  V   ++TV+    RD    + Y + S +   RFSI+ Q   G +S
Sbjct: 391 FTQPEYTVRLNEDAAVGTSVVTVSAVD-RDAHSVITYQITSGNTRNRFSITSQSGGGLVS 449

Query: 99  LMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLAD 158
           L   LDY+ E  Y   V A+D     +A V ++V + N   P F+   Y + +      D
Sbjct: 450 LALPLDYKLERQYVLAVTASDGTRQDTAQVVVNVTDANTHRPVFQSSHYTVNVNE----D 505

Query: 159 LTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSINDSGHISI-VDLSALNTSTIQLV 215
              G+ +  + A D D G+  R+T  +     +     D+G ++   +L   +  +  L 
Sbjct: 506 RPAGTTVVLISATDEDTGENARITYFMEDSIPQFRIDADTGAVTTQAELDYEDQVSYTLA 565

Query: 216 VVATDTGNP 224
           + A D G P
Sbjct: 566 ITARDNGIP 574



 Score = 44.3 bits (103), Expect = 0.091,   Method: Compositional matrix adjust.
 Identities = 40/149 (26%), Positives = 69/149 (46%), Gaps = 10/149 (6%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWL-SNDYGERFSIS-RQGDISL 99
           F ++E+ V   EN P+   +  VT   P +    ++ Y +   +  E F +    G+++ 
Sbjct: 702 FKQDEFDVFVEENSPIGLAVARVTATDPDEGTNAQIMYQIVEGNIPEVFQLDIFSGELTA 761

Query: 100 MQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPH--IPLA 157
           +  LDYE    Y   + AT   + + ATV++ +++ ND  P      +E+   +     +
Sbjct: 762 LVDLDYEDRPEYILVIQATSAPLVSRATVHVRLLDRNDNPPVLG--NFEILFNNYVTNRS 819

Query: 158 DLTPGSVIGKVEAADGDKGDRVTLSL-RG 185
              PG  IG+V A D D  D +T S  RG
Sbjct: 820 SSFPGGAIGRVPAHDPDISDSLTYSFERG 848


>gi|397517954|ref|XP_003829168.1| PREDICTED: protocadherin gamma-A5 [Pan paniscus]
          Length = 813

 Score = 65.9 bits (159), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 62/197 (31%), Positives = 91/197 (46%), Gaps = 23/197 (11%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWLSND---YGERFSI-SRQGDI 97
           F+ +EYSVS  EN+PV   LL +T   P +    ++ Y   N+     E F + S  G+I
Sbjct: 242 FTPSEYSVSVPENIPVGTRLLMLTATDPDEGINGKLTYSFRNEEEKISETFQLDSNLGEI 301

Query: 98  SLMQCLDYETEDSYRFTVYATD-TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
           S +Q LDYE    Y   V A D   +  SA V ++V +VND  P       E+ L  +  
Sbjct: 302 STLQSLDYEESRFYLMEVVAQDGGALVASAKVVVTVQDVNDNAP-------EVILTSLTS 354

Query: 157 A---DLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMF----SINDSGH-ISIVDLSALN 208
           +   D  PG+VI      DGD G+   ++   P    F    S+++  H ++  DL    
Sbjct: 355 SLSEDCLPGTVIALFSVHDGDSGENGEIACSIPRNLPFKLEKSVDNYYHLLTTRDLDREE 414

Query: 209 TSTIQLVVVATDTGNPP 225
           TS   + +   D G PP
Sbjct: 415 TSDYNITLTVMDHGTPP 431



 Score = 48.5 bits (114), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 74/285 (25%), Positives = 123/285 (43%), Gaps = 48/285 (16%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPR---DLRVKYWLSNDYGERFSISR-------Q 94
           F +  YS S  EN P    + +VT + P    + RV Y L+ D  +   +S         
Sbjct: 452 FPQASYSTSVPENNPRGVSIFSVTAHDPDSGDNARVTYSLAEDTFQGAPLSSYVSINSDT 511

Query: 95  GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFL 151
           G +  ++  DYE     +  V A+D+    ++++ ++++ V++ ND  P   YP     L
Sbjct: 512 GVLYALRSFDYEQLRDLQLWVTASDSGNPPLSSNVSLSLFVLDQNDNMPEILYPA----L 567

Query: 152 P-----HIPLADLT--PGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-DSGHI- 199
           P      + LA  +  PG ++ KV A D D G    LS   L+     +F++   +G + 
Sbjct: 568 PTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYRLLKASEPGLFAVGLHTGEVR 627

Query: 200 ---SIVDLSALNTSTIQLVVVATDTGNPPRQASVPAIM----HFPEAIVQQASSKLNSGT 252
              +++D  AL  S   LVV   D G PP  A+V   +      P+ +    S K     
Sbjct: 628 TARALLDRDALKQS---LVVAVEDHGQPPLSATVTVTVAVADRIPDILADLGSIKTPIDP 684

Query: 253 SSTVLII------LGVVLIVLGFVIILLILYI---HKNKHTKNNG 288
               L +        V  + L FVI+LL+L +   HK++  +  G
Sbjct: 685 EDLDLTLYLVVAVAAVSCVFLAFVIVLLVLRLRRWHKSRLLQAEG 729



 Score = 42.0 bits (97), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 44/141 (31%), Positives = 62/141 (43%), Gaps = 17/141 (12%)

Query: 103 LDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADL 159
           LD E    Y  T+   D     ++T + + + V +VND  P F    Y   +P     + 
Sbjct: 410 LDREETSDYNITLTVMDHGTPPLSTESHIPLKVADVNDNPPNFPQASYSTSVPE----NN 465

Query: 160 TPGSVIGKVEAADGDKGD--RVTLSLR------GPYEKMFSIN-DSGHI-SIVDLSALNT 209
             G  I  V A D D GD  RVT SL        P     SIN D+G + ++        
Sbjct: 466 PRGVSIFSVTAHDPDSGDNARVTYSLAEDTFQGAPLSSYVSINSDTGVLYALRSFDYEQL 525

Query: 210 STIQLVVVATDTGNPPRQASV 230
             +QL V A+D+GNPP  ++V
Sbjct: 526 RDLQLWVTASDSGNPPLSSNV 546


>gi|170034680|ref|XP_001845201.1| conserved hypothetical protein [Culex quinquefasciatus]
 gi|167876072|gb|EDS39455.1| conserved hypothetical protein [Culex quinquefasciatus]
          Length = 1920

 Score = 65.9 bits (159), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 53/181 (29%), Positives = 89/181 (49%), Gaps = 16/181 (8%)

Query: 50   YSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGERFSISRQ-GDISLMQCLDYETE 108
            Y    +E  P+  +L T+          +Y ++++    F I+   G +     +DYE  
Sbjct: 939  YRFQEMEEEPIGTILTTLQATDADSTVAEYRMTDN--SYFEINNTTGVVRSKARIDYEQV 996

Query: 109  DSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVI 165
               RF V   DT    ++++A + + V+N ND DP F  PQYE+ +    L +   G+V+
Sbjct: 997  TEVRFNVTVVDTGIPQLSSTAEIIVEVLNANDNDPAFEEPQYEMTV----LENAPSGTVV 1052

Query: 166  GKVEAADGDKG--DRVTLSLRGPYEKMFSIN-DSGHISIVDLSALNTS---TIQLVVVAT 219
            G V A D D G   +VT ++ G +   F+I+ D+G I++ + SAL+      I L  +A 
Sbjct: 1053 GAVTARDADAGLFGQVTYTVVGDHSGSFAIDPDTGVITVRNSSALDREQEPEIGLTAIAA 1112

Query: 220  D 220
            D
Sbjct: 1113 D 1113



 Score = 42.7 bits (99), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 49/215 (22%), Positives = 94/215 (43%), Gaps = 42/215 (19%)

Query: 45  FSKNEYSVSALENLPVN---YVLLTVTTNKPRDLRVKYWLSNDYGERFSISRQ-GDISLM 100
           FS+  Y  S  EN P+      L  +  +   +  ++Y +     + F+I  Q G +++ 
Sbjct: 704 FSREHYLTSIEENFPIGTKVETLQAIDLDTGINAEIRYRVQQGSFDDFAIDNQTGVVTIA 763

Query: 101 QCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLA 157
           + LDY+  ++Y+  + A+D     ++ + T+ +SV+N ND  P         F P    A
Sbjct: 764 RKLDYDRRNTYQMEIVASDMGTPSLSGTTTLTVSVINSNDKAP--------YFTPTTQRA 815

Query: 158 DLTP----GSVIGKVEAADGD--------------------KGDRVTLSLRGPYEKMFSI 193
           +++     G+++  + A D D                     G  VT S    ++ MF+I
Sbjct: 816 EISEDAPVGTLVHTLVALDPDVASSESLDYAATEPITAVDKNGKEVTDS--EDFKDMFTI 873

Query: 194 NDSGHISIVD-LSALNTSTIQLVVVATDTGNPPRQ 227
           + +G + +   L   + + I++ V+ TDT  P  Q
Sbjct: 874 DRTGKVFVNRILQRDDFAVIRITVLVTDTTAPSVQ 908



 Score = 41.6 bits (96), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 36/128 (28%), Positives = 60/128 (46%), Gaps = 17/128 (13%)

Query: 102 CLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFL-PHIPLADLT 160
           CLD+E +        A+D L TT   VNI++ +VN+  P F    Y   +  + P+    
Sbjct: 671 CLDFENQS-------ASDGLYTTLCNVNITIRDVNNHAPLFSREHYLTSIEENFPI---- 719

Query: 161 PGSVIGKVEAADGDKGDRVTLSLR---GPYEKMFSINDSGHISIV-DLSALNTSTIQLVV 216
            G+ +  ++A D D G    +  R   G ++     N +G ++I   L     +T Q+ +
Sbjct: 720 -GTKVETLQAIDLDTGINAEIRYRVQQGSFDDFAIDNQTGVVTIARKLDYDRRNTYQMEI 778

Query: 217 VATDTGNP 224
           VA+D G P
Sbjct: 779 VASDMGTP 786



 Score = 41.6 bits (96), Expect = 0.69,   Method: Compositional matrix adjust.
 Identities = 47/165 (28%), Positives = 71/165 (43%), Gaps = 25/165 (15%)

Query: 29   ATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDL------RVKYWLS 82
            A +IV     +  +  F + +Y ++ LEN P   V+  VT    RD       +V Y + 
Sbjct: 1017 AEIIVEVLNANDNDPAFEEPQYEMTVLENAPSGTVVGAVTA---RDADAGLFGQVTYTVV 1073

Query: 83   NDYGERFSISRQGDISLMQ---CLDYETEDSYRFTVYATDTL-----MTTSATVNISVVN 134
             D+   F+I     +  ++    LD E E     T  A D        +T+A V I V++
Sbjct: 1074 GDHSGSFAIDPDTGVITVRNSSALDREQEPEIGLTAIAADRAPERIRRSTTAPVTIRVLD 1133

Query: 135  VNDWDPRFRYPQYELFLPHIPLAD---LTPGSVIGKVEAADGDKG 176
             ND  P F    Y     H  +A+   L P + I +V AAD D+G
Sbjct: 1134 ENDNAPIFSQKIY-----HATVAENAALNPPAAILQVSAADPDEG 1173


>gi|426350336|ref|XP_004042733.1| PREDICTED: protocadherin gamma-A5 [Gorilla gorilla gorilla]
          Length = 813

 Score = 65.9 bits (159), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 62/197 (31%), Positives = 91/197 (46%), Gaps = 23/197 (11%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWLSND---YGERFSI-SRQGDI 97
           F+ +EYSVS  EN+PV   LL +T   P +    ++ Y   N+     E F + S  G+I
Sbjct: 242 FTPSEYSVSVPENIPVGTRLLMLTATDPDEGINGKLTYSFRNEEEKISETFQLDSNLGEI 301

Query: 98  SLMQCLDYETEDSYRFTVYATD-TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
           S +Q LDYE    Y   V A D   +  SA V ++V +VND  P       E+ L  +  
Sbjct: 302 STLQSLDYEESRFYLMEVVAQDGGALVASAKVVVTVQDVNDNAP-------EVILTSLTS 354

Query: 157 A---DLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMF----SINDSGH-ISIVDLSALN 208
           +   D  PG+VI      DGD G+   ++   P    F    S+++  H ++  DL    
Sbjct: 355 SLSEDCLPGTVIALFSVHDGDSGENGEIACSIPRNLPFKLEKSVDNYYHLLTTRDLDREE 414

Query: 209 TSTIQLVVVATDTGNPP 225
           TS   + +   D G PP
Sbjct: 415 TSDYNITLTVMDHGTPP 431



 Score = 48.5 bits (114), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 74/285 (25%), Positives = 122/285 (42%), Gaps = 48/285 (16%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPR---DLRVKYWLSNDYGERFSISR-------Q 94
           F +  YS S  EN P    + +VT + P    + RV Y L+ D  +   +S         
Sbjct: 452 FPQASYSTSVPENNPRGVSIFSVTAHDPDSGDNARVTYSLAEDTFQGAPLSSYVSINSDT 511

Query: 95  GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFL 151
           G +  ++  DYE     +  V A D+    ++++ ++++ V++ ND  P   YP     L
Sbjct: 512 GVLYALRSFDYEQLRDLQLWVTARDSGNPPLSSNVSLSLFVLDQNDNTPEILYPA----L 567

Query: 152 P-----HIPLADLT--PGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-DSGHI- 199
           P      + LA  +  PG ++ KV A D D G    LS   L+     +F++   +G + 
Sbjct: 568 PTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYRLLKASEPGLFAVGLHTGEVR 627

Query: 200 ---SIVDLSALNTSTIQLVVVATDTGNPPRQASVPAIM----HFPEAIVQQASSKLNSGT 252
              +++D  AL  S   LVV   D G PP  A+V   +      P+ +    S K     
Sbjct: 628 TARALLDRDALKQS---LVVAVEDHGQPPLSATVTVTVAVADRIPDILADLGSIKTPIDP 684

Query: 253 SSTVLII------LGVVLIVLGFVIILLILYI---HKNKHTKNNG 288
               L +        V  + L FVI+LL+L +   HK++  +  G
Sbjct: 685 EDLDLTLYLVVAVAAVSCVFLAFVIVLLVLRLRRWHKSRLLQAEG 729



 Score = 41.2 bits (95), Expect = 0.97,   Method: Compositional matrix adjust.
 Identities = 44/141 (31%), Positives = 61/141 (43%), Gaps = 17/141 (12%)

Query: 103 LDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADL 159
           LD E    Y  T+   D     ++T + + + V +VND  P F    Y   +P     + 
Sbjct: 410 LDREETSDYNITLTVMDHGTPPLSTESHIPLKVADVNDNPPNFPQASYSTSVPE----NN 465

Query: 160 TPGSVIGKVEAADGDKGD--RVTLSLR------GPYEKMFSIN-DSGHI-SIVDLSALNT 209
             G  I  V A D D GD  RVT SL        P     SIN D+G + ++        
Sbjct: 466 PRGVSIFSVTAHDPDSGDNARVTYSLAEDTFQGAPLSSYVSINSDTGVLYALRSFDYEQL 525

Query: 210 STIQLVVVATDTGNPPRQASV 230
             +QL V A D+GNPP  ++V
Sbjct: 526 RDLQLWVTARDSGNPPLSSNV 546


>gi|296485147|tpg|DAA27262.1| TPA: FAT tumor suppressor homolog 2 [Bos taurus]
          Length = 3159

 Score = 65.9 bits (159), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 56/206 (27%), Positives = 95/206 (46%), Gaps = 21/206 (10%)

Query: 43  LQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGER---FSISRQ-GDIS 98
           L F ++ YS + +E  PVN+++  ++      L   +W S   G++   F I +  G I 
Sbjct: 155 LAFDESHYSFTVMETDPVNHMVGVISVEGRPGL---FWFSISGGDKDMDFDIEKTTGSIV 211

Query: 99  LMQCLDYETEDSYRFTVYATDTLMTTSATVNISVV-NVNDWDPRFRYPQYELFLPHIPLA 157
           + + LD     SY  TV  TD   T +  V I ++ NVN   P+F    YE+ +P     
Sbjct: 212 IARPLDTRRRSSYNLTVEVTDGFQTIATQVYIVMIANVNHHRPQFLEAHYEVRVPQ---- 267

Query: 158 DLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSGHISIVDLSALNTSTIQLVVV 217
           D  PG  + +V+A D DKG  +  ++ G         D G  S+  L    +S + + V 
Sbjct: 268 DTMPGVELLRVQATDQDKGKGLIYTIHGS-------QDPGSASLFQLDP--SSGVLVTVG 318

Query: 218 ATDTGNPPRQASVPAIMHFPEAIVQQ 243
             D G+ P Q ++  ++   E  +++
Sbjct: 319 KLDLGSGPSQHTLTVMVRDQEMPIKR 344



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 41/155 (26%), Positives = 71/155 (45%), Gaps = 23/155 (14%)

Query: 11   ITLVVRAIQYDNQDRYALATLIVSKAGTSLREL---------------QFSKNEYSVSAL 55
            I  V +++ ++   +Y L+     K  +SL ++               +F ++ YS   L
Sbjct: 2082 ILYVNKSLDFETSPKYFLSVECSRKGSSSLSDMTTIVVNITDINEHRPRFPQHLYSTRVL 2141

Query: 56   ENLPVNYVLLTVTT---NKPRDLRVKYWL--SNDYGERFSISRQGDISLMQCLDYETEDS 110
            EN  V  V+LTV+    + P +  + Y L   N  G      ++G++ + + LD+E   S
Sbjct: 2142 ENAIVGDVVLTVSATDEDGPVNSAITYSLIGGNQLGHFAIHPKKGELQVAKALDWEQTSS 2201

Query: 111  YRFTVYATDT---LMTTSATVNISVVNVNDWDPRF 142
            Y   + ATD+    +     + I VV+VND  PRF
Sbjct: 2202 YSLKLRATDSGQPALYEDTDIAIQVVDVNDNPPRF 2236



 Score = 48.9 bits (115), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 57/198 (28%), Positives = 91/198 (45%), Gaps = 24/198 (12%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGER-----FSISRQ-GDI 97
            QFS+  Y+ SA E+LP    + +V     +D  +   +     E      FS+ +  G +
Sbjct: 1499 QFSEPLYTFSASEDLPEGSEIGSVKAVAGQDPVIYSLVQGTTPESNKDGIFSLDQNTGVL 1558

Query: 98   SLMQCLDYETEDSYRFTVYA----TDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
             + + +DYE+   Y+  + A     DT + +  +VNI V +VND  P F    Y+  L  
Sbjct: 1559 KVRKAMDYESTKWYQIDLMAHCPHNDTYLGSLVSVNIQVKDVNDNRPIFEADPYKAVL-- 1616

Query: 154  IPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYE------KMFSINDSGHISIVDLSAL 207
                ++  G+ + +V A D D GD   +S R P +      ++F+I DS    I  L  L
Sbjct: 1617 --TENMPVGTSVIQVTANDQDTGDDGQVSYRLPVDPGSNIHELFAI-DSETGWITTLQEL 1673

Query: 208  NTSTIQL---VVVATDTG 222
            +  T Q+    VVA D G
Sbjct: 1674 DCETNQIYHFYVVAYDHG 1691



 Score = 46.6 bits (109), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 70/229 (30%), Positives = 96/229 (41%), Gaps = 25/229 (10%)

Query: 13  LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENL--PVNYVLLTVTTN 70
           L++RA     QD    A + +S    S   LQF ++ Y  +  ENL      V+L    N
Sbjct: 747 LIIRASDGLYQD---TALVKISWTQASNTTLQFDRDVYRATVKENLLERKALVILGAQGN 803

Query: 71  KPRDLRVKYWLSNDYGERFSISRQGDISLMQC-LDYETEDSYRFTVYATDTLM---TTSA 126
              D  + Y+L N       I   G +       D E +D++   V   D         A
Sbjct: 804 HLNDT-LSYFLLNGTDMFHMIKSAGVLQTRGVGFDREQQDTHEVAVELRDNRTPQRVAQA 862

Query: 127 TVNISVVNVNDWDPRFRYPQYELFLPHIPLADLT-PGSVIGKVEAADGDKG--DRVTLSL 183
            V +SV +VND  P F++  Y     H  + D T PG V+ +V A D D G    VT + 
Sbjct: 863 LVRVSVEDVNDNSPEFKHLPY-----HTIIQDGTEPGDVLFQVSATDQDLGVNGAVTYAF 917

Query: 184 RGPYEKMFSINDS-GHISI---VDLSALNTSTIQLVVVATDTGNPPRQA 228
              Y   F I+   G IS+    D  ALN    +L V+A D G P  QA
Sbjct: 918 AEDY-TYFRIDPYLGDISLRKPFDYQALN--KYRLKVIAQDGGTPSLQA 963



 Score = 45.8 bits (107), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 55/192 (28%), Positives = 84/192 (43%), Gaps = 15/192 (7%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGERFSIS--RQGDISLMQC 102
            F    Y V   EN+ +   +L      P  LR+ Y +  +       +  + G +++   
Sbjct: 979  FQTPYYKVRVPENITLYTPILHTQARSPEGLRLIYNIVEEEPLMLFTTDFKTGVLTVTGP 1038

Query: 103  LDYETEDSYRFTVYATDTLMT--TSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLT 160
            LDYE++  + FTV ATDT +   + ATV + V +VND  P F    Y   +    L   T
Sbjct: 1039 LDYESKTKHVFTVRATDTALGSFSEATVEVLVEDVNDNPPTFSQLVYTTSISE-GLPAQT 1097

Query: 161  PGSVIGKVEAADGDKGDRVTLSLR-----GPYEKMFSINDS-GHISIV-DLSALNTSTIQ 213
            P   + ++ A+D D G    +S +         K F IN S G +S V +L         
Sbjct: 1098 P---VIQLLASDQDSGQNRDVSYQIVEDGSDVSKFFQINGSTGEMSTVQELDYEAQQHFH 1154

Query: 214  LVVVATDTGNPP 225
            + V A D G+PP
Sbjct: 1155 VKVRAMDRGDPP 1166



 Score = 45.1 bits (105), Expect = 0.058,   Method: Compositional matrix adjust.
 Identities = 40/133 (30%), Positives = 71/133 (53%), Gaps = 14/133 (10%)

Query: 95  GDISLMQCLDYETEDSYRFTVYATDT-----LMTTSATVNISVVNVNDWDPRFRYPQYEL 149
           G ++ +  +DYE+  S+RF +Y  D          +A V I+V NVND  PRF    YE+
Sbjct: 628 GTLTTVLEMDYESMPSFRFDIYVHDQGSPILFAPRAAQVIINVRNVNDCPPRFLDQIYEV 687

Query: 150 FLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSIND-SGHISIVDLSAL 207
            +    +  +  G  +  V+A+D D    VT S++ G  ++  +++  +G IS++D + L
Sbjct: 688 AI----MKPIHRGMELLMVQASDDDS--EVTYSIKTGNADEAIAMHPITGRISVLDPTLL 741

Query: 208 NTSTIQLVVVATD 220
             S  +L++ A+D
Sbjct: 742 GLSR-ELIIRASD 753



 Score = 44.3 bits (103), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 57/201 (28%), Positives = 82/201 (40%), Gaps = 20/201 (9%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTT------NKPRDLRVKYWLSNDYGERFSISRQGD- 96
            +F+  +Y  S +EN      + T+ T       + R +   Y    D   +F IS+ GD 
Sbjct: 1715 RFASEDYRGSVVENSEPGEPVATLKTLDADIAEQNRQVTC-YITEGDPLGQFGISQVGDE 1773

Query: 97   --ISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHI 154
              I   + LD E    Y   + A+D     S  V I V+++ND  P+      +L     
Sbjct: 1774 WRIFSRKTLDREHTAKYLLRITASDGKFQASVPVEIFVLDINDNSPQCS----QLLYTGK 1829

Query: 155  PLADLTPGSVIGKVEAA--DGDKGDRVTLSLRGPYEKMFSINDSGHISIVDLSALNTS-- 210
               D+ P   I KV A   D D   ++T SL GP    F + D     +  L+AL+    
Sbjct: 1830 VSEDVPPEHFILKVSATDLDSDTNAQITYSLHGPGADEFKL-DPHTGDLTTLTALDREKK 1888

Query: 211  -TIQLVVVATDTGNPPRQASV 230
                LV  ATD G    QA V
Sbjct: 1889 DVYSLVAKATDGGGQSCQADV 1909



 Score = 42.4 bits (98), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 46/137 (33%), Positives = 66/137 (48%), Gaps = 15/137 (10%)

Query: 103 LDYETEDSYRFTVYATD----TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLAD 158
           LD E +D +   V   D    +L +TS  V + + +VND  P F +  + + LP      
Sbjct: 8   LDRENKDEHILEVTVLDNGEPSLRSTSRVV-VRIADVNDNPPVFSHKLFNVRLPE----R 62

Query: 159 LTPGSV--IGKVEAADGDKG--DRVTLSLRGPYEKMFSIND-SGHISIVDLSALNTSTIQ 213
           L PG+   + ++ A+D D+G   RVT S+    E  FSI+  +G +S           I 
Sbjct: 63  LNPGTSGPVYRLVASDLDEGLNGRVTYSIEESDEAGFSIDPVTGVVSASSTFTAGEYNI- 121

Query: 214 LVVVATDTGNPPRQASV 230
           L V ATD G PP  ASV
Sbjct: 122 LTVKATDGGQPPLSASV 138



 Score = 41.6 bits (96), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 58/209 (27%), Positives = 97/209 (46%), Gaps = 17/209 (8%)

Query: 28   LATLIVSKAGTSLRELQFSKNEYSVSALENLPVN-YVLLTVTTNKPRDLRVKYWL--SND 84
            L T+ VS  G       F   E+SV   E+      VL   T  +P   +  Y +   N+
Sbjct: 2011 LGTVTVSVVGLEDYLPVFLSTEHSVQVPEDAQRGTEVLRLATLTRPGAEKTGYRVVSGNE 2070

Query: 85   YGERFSI-SRQGDISLMQCLDYETEDSYRFTVYAT---DTLMTTSATVNISVVNVNDWDP 140
             G RF + +R G + + + LD+ET   Y  +V  +    + ++   T+ +++ ++N+  P
Sbjct: 2071 QG-RFRLDARTGILYVNKSLDFETSPKYFLSVECSRKGSSSLSDMTTIVVNITDINEHRP 2129

Query: 141  RFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDK--GDRVTLSLRGPYE-KMFSIN-DS 196
            RF  PQ+ L+   + L +   G V+  V A D D      +T SL G  +   F+I+   
Sbjct: 2130 RF--PQH-LYSTRV-LENAIVGDVVLTVSATDEDGPVNSAITYSLIGGNQLGHFAIHPKK 2185

Query: 197  GHISIVD-LSALNTSTIQLVVVATDTGNP 224
            G + +   L    TS+  L + ATD+G P
Sbjct: 2186 GELQVAKALDWEQTSSYSLKLRATDSGQP 2214



 Score = 38.5 bits (88), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 35/132 (26%), Positives = 60/132 (45%), Gaps = 1/132 (0%)

Query: 12  TLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNK 71
           TL V+A    +   + LAT+I+    +      FS +EY V   E++PV   +L ++   
Sbjct: 435 TLTVKAEDQGSPQGHDLATVIIHVYPSDSSAPIFSNSEYFVEIPESIPVGSPILLISATS 494

Query: 72  PRDLRVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDTLMT-TSATVNI 130
             ++  +    N  G     S  G IS  + LD+E   SY+  +  ++   T T   V +
Sbjct: 495 FSEVTYELREGNKNGVFSMNSYSGLISTQKKLDHEKISSYQLKIRGSNMAGTFTDVMVLV 554

Query: 131 SVVNVNDWDPRF 142
            +++ ND  P F
Sbjct: 555 YIIDENDNAPVF 566


>gi|426229938|ref|XP_004009040.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 2 [Ovis aries]
          Length = 4343

 Score = 65.9 bits (159), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 56/206 (27%), Positives = 96/206 (46%), Gaps = 21/206 (10%)

Query: 43   LQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGER---FSISRQ-GDIS 98
            L F ++ YS + +E  PVN+++  ++      L   +W S   G++   F I +  G I 
Sbjct: 1343 LAFDESHYSFAVMETDPVNHMVGVISVEGRPGL---FWFSISGGDKDMDFDIEKTTGSIV 1399

Query: 99   LMQCLDYETEDSYRFTVYATDTLMTTSATVNISVV-NVNDWDPRFRYPQYELFLPHIPLA 157
            + + LD     SY  TV  TD   T +  V I+++ NVN   P+F    YE+ +P     
Sbjct: 1400 IARPLDTRRRSSYNLTVEVTDGSQTIATQVYIAMIANVNHHRPQFLEAHYEVRVPQ---- 1455

Query: 158  DLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSGHISIVDLSALNTSTIQLVVV 217
            D  PG  + +V+A D DKG  +  ++ G         D G  S+  L    +S + + V 
Sbjct: 1456 DTMPGVELLRVQATDQDKGKGLIYTIHGS-------QDPGSASLFQLDP--SSGVLVTVG 1506

Query: 218  ATDTGNPPRQASVPAIMHFPEAIVQQ 243
              D G+ P Q ++  ++   E  +++
Sbjct: 1507 KLDLGSGPSQHTLTVMVRDQEMPIKR 1532



 Score = 51.2 bits (121), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 58/228 (25%), Positives = 102/228 (44%), Gaps = 25/228 (10%)

Query: 28   LATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWL--S 82
            + T++V+    +  + +F ++ YS   LEN  V  V+LTV+    + P +  + Y L   
Sbjct: 3302 MTTIVVNITDVNEHQPRFPQHLYSTRVLENAIVGDVVLTVSATDEDGPVNSAITYSLIGG 3361

Query: 83   NDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWD 139
            N  G      ++G++ + + LD+E   SY   + ATD+    +     + I VV+VND  
Sbjct: 3362 NQLGHFAIHPKKGELQVAKALDWEQTSSYSLKLRATDSGQPALYEDTDIAIQVVDVNDNP 3421

Query: 140  PRFRYPQYELFL-PHIPLADLTPGSVIGKVEAADGDKGD-------RVTLSLRGPYEKMF 191
            PRF    Y   +  + P+     GS + ++  +D D  +       R+T   +G     F
Sbjct: 3422 PRFFQLNYSTSVQENAPI-----GSKVLQLILSDPDSPENGPPFSFRIT---KGNDGFAF 3473

Query: 192  SINDSGH-ISIVDLSALNTSTIQLVVVATDTGNPPRQASVPAIMHFPE 238
             +   G  ++   LS       QL +  +D+G PP  +S    +H  E
Sbjct: 3474 RVTPDGWLVTTAGLSKRVQEWYQLQIEVSDSGTPPLSSSTSVKVHVRE 3521



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 57/198 (28%), Positives = 91/198 (45%), Gaps = 24/198 (12%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGER-----FSISRQ-GDI 97
            QFS+  Y+ SA E+LP    + +V     +D  +   +     E      FS+ +  G +
Sbjct: 2687 QFSEPLYTFSASEDLPEGSEIGSVKAVAAQDPVIYSLVQGTTPESNKDGIFSLDQNTGVL 2746

Query: 98   SLMQCLDYETEDSYRFTVYA----TDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
             + + +DYE+   Y+  + A     DT + +  +VNI V +VND  P F    Y+  L  
Sbjct: 2747 KVRKAMDYESTKWYQIDLMAHCPHNDTYLGSLVSVNIQVKDVNDNRPIFEADPYKAVL-- 2804

Query: 154  IPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYE------KMFSINDSGHISIVDLSAL 207
                ++  G+ + +V A D D GD   +S R P +      ++F+I DS    I  L  L
Sbjct: 2805 --TENMPVGTSVIQVTANDQDTGDDGQVSYRLPVDPGSNIHELFAI-DSETGWITTLQEL 2861

Query: 208  NTSTIQL---VVVATDTG 222
            +  T Q+    VVA D G
Sbjct: 2862 DCETNQIYHFYVVAYDHG 2879



 Score = 48.5 bits (114), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 60/206 (29%), Positives = 86/206 (41%), Gaps = 22/206 (10%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTT------NKPRDLRVKYWLSNDYGERFSISRQGD- 96
            +F+  +Y  S +EN      + T+ T       + R +   Y    D   +F IS+ GD 
Sbjct: 2903 RFASEDYRGSVVENSEPGEPVATLKTLDADISEQNRQVTC-YITEGDPLGQFGISQVGDE 2961

Query: 97   --ISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHI 154
              I   + LD E    Y   + A+D     S  V I V+++ND  P+      +L     
Sbjct: 2962 WRIFSRKTLDREHTAKYLLRITASDGKFQASVPVEIFVLDINDNSPQCS----QLLYAGE 3017

Query: 155  PLADLTPGSVIGKVEAA--DGDKGDRVTLSLRGPYEKMFSINDSGHISIVDLSALNTS-- 210
               D+ PG  I KV A   D D   ++T SL GP    F + D     +  L+AL+    
Sbjct: 3018 VSEDVPPGHFILKVSATDLDSDTNAQITYSLHGPGADEFKL-DPHTGELTTLTALDREKK 3076

Query: 211  -TIQLVVVATDTGNPPRQASVPAIMH 235
                LV  ATD G    QA V  I+H
Sbjct: 3077 DAYSLVAKATDGGGQSCQADV--ILH 3100



 Score = 47.8 bits (112), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 72/229 (31%), Positives = 98/229 (42%), Gaps = 25/229 (10%)

Query: 13   LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENL--PVNYVLLTVTTN 70
            L+VRA     QD  AL  +  ++A  +   LQF ++ Y  +  ENL      V+L    N
Sbjct: 1935 LIVRASDGLYQDT-ALVKISWTQAPNTT--LQFDRDVYRAAVKENLLERKALVILGAQGN 1991

Query: 71   KPRDLRVKYWLSNDYGERFSISRQGDISLMQC-LDYETEDSYRFTVYATDTLM---TTSA 126
               D  + Y+L N       I   G +       D E +D++   V   D         A
Sbjct: 1992 HLNDT-LSYFLLNGTDMFHMIQSAGVLQTRGVGFDREQQDTHEVAVELRDNRTPQRVAQA 2050

Query: 127  TVNISVVNVNDWDPRFRYPQYELFLPHIPLADLT-PGSVIGKVEAADGDKG--DRVTLSL 183
             V +SV +VND  P F+Y  Y     H  + D T PG V+ +V A D D G    VT + 
Sbjct: 2051 LVRVSVEDVNDNSPEFKYLPY-----HTIIQDGTEPGDVLFQVSATDQDLGVNGAVTYAF 2105

Query: 184  RGPYEKMFSINDS-GHISI---VDLSALNTSTIQLVVVATDTGNPPRQA 228
               Y   F I+   G IS+    D  ALN    +L V+A D G P  QA
Sbjct: 2106 AEDY-TYFRIDPYLGDISLRKPFDYQALN--KYRLKVIAQDGGTPSLQA 2151



 Score = 45.4 bits (106), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 55/192 (28%), Positives = 84/192 (43%), Gaps = 15/192 (7%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGERFSIS--RQGDISLMQC 102
            F    Y V   EN+ +   +L      P  LR+ Y +  +       +  + G +++   
Sbjct: 2167 FQTPYYKVRVPENITLYTPILHTQARSPEGLRLIYNIVEEEPLMLFTTDFKTGVLTVTGP 2226

Query: 103  LDYETEDSYRFTVYATDTLMT--TSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLT 160
            LDYE++  + FTV ATDT +   + ATV + V +VND  P F    Y   +    L   T
Sbjct: 2227 LDYESKTKHVFTVRATDTALGSFSEATVEVLVEDVNDNPPTFSQLVYTTSISE-GLPAQT 2285

Query: 161  PGSVIGKVEAADGDKGDRVTLSLR-----GPYEKMFSINDS-GHISIV-DLSALNTSTIQ 213
            P   + ++ A+D D G    +S +         K F IN S G +S V +L         
Sbjct: 2286 P---VIQLLASDRDSGQNRDVSYQIVEDGSDVSKFFQINGSTGEMSTVQELDYEAQQHFH 2342

Query: 214  LVVVATDTGNPP 225
            + V A D G+PP
Sbjct: 2343 VKVRAMDRGDPP 2354



 Score = 45.4 bits (106), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 40/133 (30%), Positives = 71/133 (53%), Gaps = 14/133 (10%)

Query: 95   GDISLMQCLDYETEDSYRFTVYATDT-----LMTTSATVNISVVNVNDWDPRFRYPQYEL 149
            G ++ +  +DYE+  S+RF +Y  D          +A V I+V NVND  PRF    YE+
Sbjct: 1816 GTLTTVLEMDYESMPSFRFNIYVHDQGSPILFAPRAAQVIINVRNVNDCPPRFLDQIYEV 1875

Query: 150  FLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSIND-SGHISIVDLSAL 207
             +    +  +  G  +  V+A+D D    V+ S++ G  ++  +++  +G IS++D + L
Sbjct: 1876 AI----MKPVHRGMALLTVQASDDDS--EVSYSIKTGNADEAIAMHPITGRISVLDPTLL 1929

Query: 208  NTSTIQLVVVATD 220
              S  +L+V A+D
Sbjct: 1930 GLSR-ELIVRASD 1941



 Score = 44.3 bits (103), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 48/145 (33%), Positives = 71/145 (48%), Gaps = 15/145 (10%)

Query: 95   GDISLMQCLDYETEDSYRFTVYATD----TLMTTSATVNISVVNVNDWDPRFRYPQYELF 150
            G ++  + LD E +D +   V   D    +L +TS  V + +V+VND  P F +  + + 
Sbjct: 1188 GLLATARQLDRENKDEHILEVTVLDNGEPSLRSTSRVV-VRIVDVNDNPPVFSHKLFNVR 1246

Query: 151  LPHIPLADLTPGSV--IGKVEAADGDKG--DRVTLSLRGPYEKMFSIND-SGHISIVDLS 205
            LP      L PG+   + ++ A+D D+G   RVT S+    E  FSI+  +G +S     
Sbjct: 1247 LPE----RLIPGTSGPVYRLVASDLDEGLNGRVTYSIEESDEAGFSIDPVTGVVSASSTF 1302

Query: 206  ALNTSTIQLVVVATDTGNPPRQASV 230
                  I L V ATD G PP  ASV
Sbjct: 1303 TAGEYNI-LTVKATDGGQPPLSASV 1326



 Score = 41.2 bits (95), Expect = 0.87,   Method: Compositional matrix adjust.
 Identities = 38/114 (33%), Positives = 54/114 (47%), Gaps = 11/114 (9%)

Query: 128  VNISVVNVNDWDPRFRYPQYELFLPHIPLADLT-PGSVIGKVEAADGDKGDRVTLS---L 183
            V+I V + N   PRF    YE       ++D T PG+ + +V A DGD+G    +    L
Sbjct: 1537 VSIHVEDRNLHRPRFTQLHYE-----TRVSDTTVPGAELLQVRAMDGDRGANAEVRYSFL 1591

Query: 184  RGPYEKMFSIND-SGHISIVD-LSALNTSTIQLVVVATDTGNPPRQASVPAIMH 235
            +G  E  F+IN   G I++   L   N +   L V A D G+P R      I+H
Sbjct: 1592 KGNSEGFFNINTLLGIITLAQKLDQANHARYTLTVKAEDQGSPQRHDLATVIIH 1645



 Score = 40.4 bits (93), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 57/209 (27%), Positives = 97/209 (46%), Gaps = 17/209 (8%)

Query: 28   LATLIVSKAGTSLRELQFSKNEYSVSALENLPVN-YVLLTVTTNKPRDLRVKYWL--SND 84
            L T+ VS  G       F   E+SV   E+      VL   T  +P   +  Y +   N+
Sbjct: 3199 LGTVTVSVVGLEDYLPVFLSTEHSVQVPEDAQRGTEVLRLATLTRPGAEKTSYRVVSGNE 3258

Query: 85   YGERFSI-SRQGDISLMQCLDYETEDSYRFTVYAT---DTLMTTSATVNISVVNVNDWDP 140
             G RF + +R G + + + LD+ET   +  ++  +    + ++   T+ +++ +VN+  P
Sbjct: 3259 QG-RFRLDARTGILYVNKSLDFETSPKHFLSIECSRKGSSSLSDMTTIVVNITDVNEHQP 3317

Query: 141  RFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDK--GDRVTLSLRGPYE-KMFSIN-DS 196
            RF  PQ+ L+   + L +   G V+  V A D D      +T SL G  +   F+I+   
Sbjct: 3318 RF--PQH-LYSTRV-LENAIVGDVVLTVSATDEDGPVNSAITYSLIGGNQLGHFAIHPKK 3373

Query: 197  GHISIVD-LSALNTSTIQLVVVATDTGNP 224
            G + +   L    TS+  L + ATD+G P
Sbjct: 3374 GELQVAKALDWEQTSSYSLKLRATDSGQP 3402



 Score = 40.0 bits (92), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 53/185 (28%), Positives = 86/185 (46%), Gaps = 19/185 (10%)

Query: 56   ENLPVNYVLLTVTTNKPRDL----RVKYWLSNDYGERFSIS-RQGDISLMQCLDYETEDS 110
            E+LP   +L  +  + P DL     V+Y L +D    F ++   G +SL + LD+E    
Sbjct: 932  EDLPPATILTFLDASDP-DLGPAGEVQYVLLDDVHGTFHVNPMTGALSLEKELDFERRAG 990

Query: 111  YRFTVYATDT----LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTP-GSVI 165
            Y  +++A+D+       T   V + V++VN+       P +  F+    + + +P G+ +
Sbjct: 991  YNLSLWASDSGKPLARRTLCHVEVIVLDVNE---NLHPPHFASFVHQGQVQENSPSGTSV 1047

Query: 166  GKVEAADGDKG--DRVTLSLR-GPYEKMFSIN-DSGHI-SIVDLSALNTSTIQLVVVATD 220
              V A D D G    +   LR G     FSIN D+G I ++  L     S   L V+A D
Sbjct: 1048 MVVAAHDDDTGLDGELQYFLRAGTSLAAFSINQDTGMIQTLAPLDREFASCYWLTVLAVD 1107

Query: 221  TGNPP 225
             G+ P
Sbjct: 1108 RGSIP 1112



 Score = 39.7 bits (91), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 35/132 (26%), Positives = 60/132 (45%), Gaps = 1/132 (0%)

Query: 12   TLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNK 71
            TL V+A    +  R+ LAT+I+    +      FS +EY V   E++PV   +L ++   
Sbjct: 1623 TLTVKAEDQGSPQRHDLATVIIHVHPSDSSAPVFSNSEYFVEIPESIPVGSPILLISATS 1682

Query: 72   PRDLRVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDTLMT-TSATVNI 130
              ++  +    N  G     S  G IS  + LD+E   SY+  +  ++     T   V +
Sbjct: 1683 FSEVTYELREGNKNGVFSMNSYSGLISTQKKLDHEKISSYQLKIRGSNMAGAFTDIMVLV 1742

Query: 131  SVVNVNDWDPRF 142
             +++ ND  P F
Sbjct: 1743 YIIDENDNAPVF 1754


>gi|410915828|ref|XP_003971389.1| PREDICTED: protocadherin-16-like [Takifugu rubripes]
          Length = 3314

 Score = 65.9 bits (159), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 70/212 (33%), Positives = 92/212 (43%), Gaps = 16/212 (7%)

Query: 30   TLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTV---TTNKPRDLRVKYWLSNDY- 85
            TL+V       R   F    Y V   EN P+N   L V    T       + Y L  D  
Sbjct: 990  TLVVHIQAQDARGPNFDTLTYRVELRENTPLNTRFLQVRALNTEASGSAAISYRLRPDGD 1049

Query: 86   GERFSISRQGD-ISLMQCLDYETEDSYRFTVYATD----TLMTTSATVNISVVNVNDWDP 140
               F I   G  + +   LD E +D Y  TV AT        T SATV ++V + ND  P
Sbjct: 1050 AAGFGIMPDGGWLFVRSSLDREVKDMYLLTVLATSGPGGAGRTGSATVRVTVTDENDNSP 1109

Query: 141  RFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPY-EKMFSIN-DSGH 198
            R    Q  +FL      +L  G+  G+V A D D G    L+ R  + ++ F IN  +G 
Sbjct: 1110 RLS--QERVFL--AVRENLLAGTGFGRVSATDRDAGLNARLTYRLLHTDRHFQINSQTGE 1165

Query: 199  ISI-VDLSALNTSTIQLVVVATDTGNPPRQAS 229
            +S  + L     S+ QLVVV  D G PPR A+
Sbjct: 1166 VSTRLALDREQQSSYQLVVVVQDGGTPPRSAT 1197



 Score = 62.0 bits (149), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 52/185 (28%), Positives = 94/185 (50%), Gaps = 14/185 (7%)

Query: 51   SVSALENLPVNYVLLTVTT---NKPRDLRVKYWL-SNDYGERFSI-SRQGDISLMQCLDY 105
            +VS +E+ PV +V+L V     ++    RV Y + + +   RF + +  G +S+++ LD 
Sbjct: 1561 AVSVMEDQPVGFVILYVMARDEDEGEHGRVSYRIQAGNSAGRFRLDADTGSLSILKALDR 1620

Query: 106  ETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPG 162
            E +D +  T+ A D     ++ S  +++ V++VND  P F+  ++E  +      +  PG
Sbjct: 1621 EEQDVFNLTIVAEDHGIPQLSRSQVLSVQVIDVNDEAPVFQRAEFEAQVTE----NQGPG 1676

Query: 163  SVIGKVEAADGDKGDRVTLSLRGPYEKMFSIND-SGHISIV-DLSALNTSTIQLVVVATD 220
            + + +V A D D+G    ++  G  E+ F IN  +G I+   +L +       L V A D
Sbjct: 1677 TTVLRVTAVDRDQGSNGHVTYGGVTEEGFVINPVTGVITTTKELDSEAQGHYTLTVYARD 1736

Query: 221  TGNPP 225
             G PP
Sbjct: 1737 GGLPP 1741



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 47/143 (32%), Positives = 70/143 (48%), Gaps = 12/143 (8%)

Query: 89   FSISR-QGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQY 147
            F I R  G ISL   LD+E +  Y  TV ATD+   T A + I + ++ND  P F +  Y
Sbjct: 2327 FGIHRYSGGISLTAPLDFEEQTWYTLTVRATDSQHQTEANITILIEDINDNTPAFTHDLY 2386

Query: 148  ELFLP-HIPLADLTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSINDSGHISIVDL 204
            ++ LP H P      GS +  V A D D G+  ++T S+    +  F I+ +     +D 
Sbjct: 2387 QVSLPEHTPA-----GSTVVTVTATDRDSGENGKITYSVMSSTQDGFYIDPNNGTLFIDH 2441

Query: 205  SAL---NTSTIQLVVVATDTGNP 224
             A        + +V+VA D G+P
Sbjct: 2442 RAEFDPERPAVSIVIVARDGGSP 2464



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 61/205 (29%), Positives = 95/205 (46%), Gaps = 16/205 (7%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDL---RVKYWLSNDYGERFSISRQ-GDISLM 100
            FS++ YS+   E+    Y +L V+     D    +V Y+LS+D    F++    G I+  
Sbjct: 1866 FSESSYSLEVSEDAAEGYQVLEVSAADADDALNGKVLYFLSHDAHGAFTVDENTGIITTS 1925

Query: 101  QCLDYETEDSYRFTVYATD----TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
              LD E   SY F V+A D        +SA V ++V++VND  P F   Q  L    I +
Sbjct: 1926 AALDREKWPSYNFQVFAVDLSPAAPRNSSAQVTVAVLDVNDNAPVFT--QDPLV---IEV 1980

Query: 157  ADLTPGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSIND-SGHISIVD-LSALNTSTIQ 213
            +      V+  ++A D D G   ++  R     K FSIN  +G I   + L  L  +   
Sbjct: 1981 SSRHSQRVLATMKAEDKDFGANGSVFYRFATAVKGFSINSLTGEIQATEPLQELTQAQRT 2040

Query: 214  LVVVATDTGNPPRQASVPAIMHFPE 238
            L+V A D G+P + A    +++  E
Sbjct: 2041 LIVEAMDQGSPAQSAQGVVVIYVKE 2065



 Score = 51.2 bits (121), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 47/146 (32%), Positives = 72/146 (49%), Gaps = 12/146 (8%)

Query: 89   FSISRQ-GDISLMQCLDYETEDSYRFTVYATDTLM---TTSATVNISVVNVNDWDPRFRY 144
            F I+ Q G++S    LD E + SY+  V   D      + + T +I+V++ ND  P F +
Sbjct: 1157 FQINSQTGEVSTRLALDREQQSSYQLVVVVQDGGTPPRSATGTAHITVLDENDNAPAFSH 1216

Query: 145  --PQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTL--SLRGPYEKMFSIND-SGHI 199
              P  EL L    +  L  G+V+G V A D D+G+  T+  SL G   + F++N  +G +
Sbjct: 1217 TRPDRELLLE--VMEGLPAGTVLGTVTAKDPDEGENGTVHYSLSGARAERFTLNPVTGEL 1274

Query: 200  -SIVDLSALNTSTIQLVVVATDTGNP 224
             +   LS    S    +V A D G P
Sbjct: 1275 KTAFPLSWGERSEYTFMVTAADHGTP 1300



 Score = 48.5 bits (114), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 62/226 (27%), Positives = 101/226 (44%), Gaps = 19/226 (8%)

Query: 12   TLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNK 71
            TL+V A+   +  + A   +++         ++FS+N   VS  EN      +       
Sbjct: 2040 TLIVEAMDQGSPAQSAQGVVVIYVKEVEYNGIRFSRNARDVSIQENAAKGTAVAQAQAQH 2099

Query: 72   PRDLR--VKYWL-SNDYGERFSI-SRQGDISLM--QCLDYETEDSYRFTVYATDTLMTTS 125
            P   R  + Y L S +  + F I S  G+I +   + LD+E     R  V A     T+ 
Sbjct: 2100 PDGTRRGISYSLFSGNRKKAFIINSSTGEIRVQSSKGLDFEDTPRLRLVVKADSVSSTSF 2159

Query: 126  ATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGD--RVTLSL 183
              +N+ + +VND  PRF+   Y  ++      DL     I +V A D D+G   +VT S+
Sbjct: 2160 MAINLILQDVNDNLPRFQLKNYVAYMREAQGYDLP----IIQVVAEDVDQGQNGQVTYSI 2215

Query: 184  RGP-YEKMFSIND-SGHI---SIVDLSALNTSTIQLVVVATDTGNP 224
            +      +F I+  +G I   +I+D      +  +LVV ATD G+P
Sbjct: 2216 QSSGMSGLFKIDPVTGSITTAAIMDREIFTQT--KLVVTATDRGSP 2259



 Score = 46.6 bits (109), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 42/141 (29%), Positives = 63/141 (44%), Gaps = 18/141 (12%)

Query: 97  ISLMQCLDYETEDSYRFTVYATDTL---MTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
           I + Q LD E  DSY   V ATD+    +   ++  I V +VND  P F    Y   +P 
Sbjct: 424 IYVDQELDREERDSYELRVMATDSGTPPLRAESSFTIQVTDVNDNPPLFDQQAYRQTIPE 483

Query: 154 IPLADLTPGSVIGKVEAADGDKGDRVTLSLR-----GPYEKMFSINDSGHI----SIVDL 204
           +    + PGS + +V A D D+G    +  R       +   FSI+    I    +++D 
Sbjct: 484 V----VYPGSFVLQVTARDKDQGPNGDVRYRLLKSKNSHSDWFSIDPVTGIITTATVLDF 539

Query: 205 SALNTSTIQLVVVATDTGNPP 225
            +    ++   VVA D G PP
Sbjct: 540 ESEPAPSV--TVVAMDNGRPP 558



 Score = 42.7 bits (99), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 43/164 (26%), Positives = 71/164 (43%), Gaps = 12/164 (7%)

Query: 21   DNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNY---VLLTVTTNKPRDLRV 77
            D Q  +ALA +IV     +     F     + S  EN P N    VL  +  +     ++
Sbjct: 2682 DGQGHFALAPVIVEVKDVNDNHPFFPVEVLTASIRENQPANSAVTVLHAIDHDTGVFGKL 2741

Query: 78   KYWLSNDYG---ERFSISR-QGDISLMQCLDYETEDSYRFTVYATDTL-MTTSATVNISV 132
            KY + +  G   + FS+ +  G+I      D+E  +S+ F   A D+   + + TV + V
Sbjct: 2742 KYLMIDRSGAGKDSFSVDQNSGEIRSKIPFDFEKINSFSFVALAIDSGNHSATVTVQVFV 2801

Query: 133  VNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG 176
               +++DP F    +   +P         G  IG+V+A D D G
Sbjct: 2802 TGEDEYDPVFLSSDFSFEVPE----GAKKGQSIGQVQANDEDAG 2841



 Score = 39.7 bits (91), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 57/194 (29%), Positives = 88/194 (45%), Gaps = 19/194 (9%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVT-TNKPRDL--RVKYWLSNDYGER----FSISRQ-GD 96
           FS N Y+ S  EN P     L V+ T++ R     V Y L +  G      F++ ++ G 
Sbjct: 579 FSSNFYNASIKENTPAGTCFLEVSATDEDRGSFGAVSYALGSPSGSSPPGPFTVGKESGR 638

Query: 97  ISLMQCLDY-ETEDSYRFTVYATDTL-MTTSATVNISVVNVNDWDPRFRYPQYELFLPHI 154
           +     LD  +  D +  TV ATD   ++ +A V + VV++ND  P F    Y + L   
Sbjct: 639 LCTSTPLDRDQGADKFDLTVTATDGGGLSAAARVRVWVVDINDNRPAFYPVLYAVSLS-- 696

Query: 155 PLADLTPGSVIGKVEAADGDKG--DRVTLSLR-GPYEKMFSIN-DSGHISIV-DLSALNT 209
                +PG+ + +V A D D G   RVT  +        F++N D+G IS+   L     
Sbjct: 697 --THSSPGTSVVRVTANDPDSGANGRVTYRIAPAGGSAFFTLNKDTGVISLSRSLHGKAN 754

Query: 210 STIQLVVVATDTGN 223
           + I + + A D G 
Sbjct: 755 TVISMEISAEDGGG 768



 Score = 38.9 bits (89), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 39/137 (28%), Positives = 58/137 (42%), Gaps = 11/137 (8%)

Query: 45   FSKNEYSVSALENL-PVNYVLLTVT---TNKPRDLRVKYWLSNDYGERFSISRQGDISLM 100
            F+K  Y +   EN  PV    L  T   +    +L  +    +  G+       G +S  
Sbjct: 1762 FAKLWYGLEVPENQEPVQLCFLKATDPDSGAGGELEYRITAGDPDGDFHLHPSTGALSTS 1821

Query: 101  QCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLA 157
            + LD ET   +   V ATD     ++T+ TV + V++VND  P F    Y L +      
Sbjct: 1822 RGLDRETRAEHILEVVATDRGSPALSTTVTVQVQVMDVNDNSPVFSESSYSLEVSE---- 1877

Query: 158  DLTPGSVIGKVEAADGD 174
            D   G  + +V AAD D
Sbjct: 1878 DAAEGYQVLEVSAADAD 1894


>gi|326918941|ref|XP_003205743.1| PREDICTED: protocadherin Fat 4-like [Meleagris gallopavo]
          Length = 5008

 Score = 65.9 bits (159), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 79/270 (29%), Positives = 117/270 (43%), Gaps = 44/270 (16%)

Query: 2    INEDD-----FLQPITLV---VRAIQYDNQDRYALATLIVSKAGTSLRELQ--------- 44
            ++EDD     FL P+T V    RA+ Y+ Q  Y L T+     G     ++         
Sbjct: 1919 VSEDDEEGMFFLNPVTGVFNLTRALDYEAQQYYIL-TIRAEDGGGQFTTIRVYFNILDIN 1977

Query: 45   -----FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWL-SNDYGERFSISRQG 95
                 FS   YS S +ENL     +L  +     D    ++ + + S D    F I   G
Sbjct: 1978 DNPPVFSMTSYSTSLMENLAPGSAILNFSVTDADDGSNSQLSFSIASGDSVGHFGIDNSG 2037

Query: 96   DISLMQCLDYETEDSYRFTVYATD------TLMTTSATVNISVVNVNDWDPRFRYPQYEL 149
             +S+ Q LD E +  Y   V   D      +  T++A V+I +++VND  P F  P+   
Sbjct: 2038 VLSIQQPLDREKQSFYSLVVQVHDMAPLPASRYTSTAQVSIILLDVNDSPPSFISPK--- 2094

Query: 150  FLPHIPLADLTP-GSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIND-SGHISIV-DL 204
             L +IP  + TP  +V+ K +A D D G    +  SL  P    FSI    G + ++ +L
Sbjct: 2095 -LTYIP--ENTPIDTVVFKAQATDPDSGPNSYIEYSLLRPLGNKFSIGTIDGEVRLIGEL 2151

Query: 205  SALNTSTIQLVVVATDTGNPPRQASVPAIM 234
                 S   L VVATD G P   +S   I+
Sbjct: 2152 DREAVSNYTLTVVATDKGQPSLSSSTDVIV 2181



 Score = 57.8 bits (138), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 57/192 (29%), Positives = 88/192 (45%), Gaps = 22/192 (11%)

Query: 50   YSVSALENLPVNYVLLTVTTNKPRDL---RVKYWLSNDYGERFSIS-RQGDISLMQCLDY 105
            +S S  EN P+ + +  VTT+   D+    +  +   D    F I+   GDI++ + L+ 
Sbjct: 2801 FSASVPENAPLGFTVTRVTTSD-EDIGMNAISRYSIRDTSLPFIINPSTGDITVSRLLNR 2859

Query: 106  ETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVI 165
            E  D YR  V A D+  T S  V + V +VND  PRF  P Y L  P +P   L     +
Sbjct: 2860 EDTDRYRIRVSAHDSGWTVSTDVTVFVTDVNDNAPRFTKPSYYLECPELPGIGLK----V 2915

Query: 166  GKVEAADGDKGD--RVTLSLRGPYEKMFSIN-DSGHI---------SIVDLSALNTSTIQ 213
             +V A D D+G    +   ++   E  F IN  +G I         +    S +N +   
Sbjct: 2916 TQVSATDPDEGSNGHIFYFIKSQSE-FFRINATTGEIFNKQYLRYQNSSGSSNVNINRHS 2974

Query: 214  LVVVATDTGNPP 225
             +V ++D G+PP
Sbjct: 2975 FIVTSSDRGSPP 2986



 Score = 57.8 bits (138), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 58/235 (24%), Positives = 106/235 (45%), Gaps = 27/235 (11%)

Query: 13   LVVRAIQYDNQDRYALATLIVSKAGTSLRELQ-----------------FSKNEYSVSAL 55
            ++   I  D ++R A    +V+  G  L+                    F++  Y     
Sbjct: 783  IITTKIALDREERTAYQLQVVATDGGHLQSQNQAIVTITVLDTQDNPPVFNQGMYGFVVF 842

Query: 56   ENLPVNYVLLTV-TTNKPRDLRVKYWLS-NDYGERFSISR-QGDISLMQCLDYETEDSYR 112
            EN+ + Y + TV  +    +  + Y ++  D    F+I+R  G I+    +D E +  Y+
Sbjct: 843  ENVALGYHVGTVFASTMDLNTNISYLITTGDQRGMFAINRVTGQITTASIIDREEQAFYQ 902

Query: 113  FTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAAD 172
              V A+   +T    VNI+V ++ND  P F +    + +    + +   G  I + +A D
Sbjct: 903  LKVVASGGAVTGDTIVNITVKDLNDNSPHFIHAVESVNV----VENWKAGHTIFQAKALD 958

Query: 173  GDKG--DRVTLSLRGPYEKMFSIND-SGHISIVDLSALNTSTIQLVVVATDTGNP 224
             D+G    V  SL+   + +FSIN+ +G IS++    +N  T Q+ ++A+D G P
Sbjct: 959  PDEGVNGMVLYSLKQNPKGLFSINEQTGAISLIGQLDINAGTYQVEILASDMGVP 1013



 Score = 55.1 bits (131), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 42/82 (51%), Gaps = 4/82 (4%)

Query: 95   GDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHI 154
            GD+   + LD E    Y   V A D L ++   +NI+V +VND  P+F  P Y   +P  
Sbjct: 1833 GDLIATKRLDRERRSKYSLLVRADDGLQSSDMRINITVSDVNDHIPKFSKPVYSFDIPE- 1891

Query: 155  PLADLTPGSVIGKVEAADGDKG 176
               D TPGS++  + A D D G
Sbjct: 1892 ---DATPGSLVAAILATDDDSG 1910



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 62/223 (27%), Positives = 99/223 (44%), Gaps = 35/223 (15%)

Query: 45   FSKNEYSVSALENLPV--NYVLLTVTTNKPRDLRVKY---WLSNDYGERFSISRQGDISL 99
            F  + Y+V+  ENL      +L  V  +  + L  K     +S +    F++S  G++ L
Sbjct: 2283 FELSPYNVNVPENLETLPKVILQVVARDDDQGLNSKLTYVLVSGNEEGAFTLSASGELRL 2342

Query: 100  MQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
            +Q LD ET++ Y   + A D+    +T + T+ ++V +VND  P F +  Y   +P    
Sbjct: 2343 VQSLDRETKEQYVLLITAADSGSPALTGTGTITVTVDDVNDNVPTFAFNMYSAAVPE--- 2399

Query: 157  ADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDS-GHI---SIVDLS------- 205
             D   G+ I  V ++D D      + L G     F+IN S G I   +++D         
Sbjct: 2400 -DAPTGTDILLVNSSDADASRNAVIRLTGG-NSQFTINPSTGQIITSALLDRETRENYTL 2457

Query: 206  -----------ALNTSTIQLVVVATDTGNPPRQASVPAIMHFP 237
                       AL++ST  LV VA    NPP+    P + H P
Sbjct: 2458 VVVASDGGYPKALSSSTSVLVAVADVNDNPPKFQHHPYVTHVP 2500



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 45/158 (28%), Positives = 83/158 (52%), Gaps = 13/158 (8%)

Query: 87   ERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRF 142
            ++F+I S  G ++L+  LD+E   SY   + A D+    ++++ T++I V++ ND  P F
Sbjct: 1295 KQFAIDSSTGQVTLVGKLDHEATASYSLVIQAVDSGAVPLSSTCTLSIDVLDENDNSPSF 1354

Query: 143  RYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTL--SLRGPY-EKMFSIN-DSGH 198
              P+  L +    L ++  G ++  V A D D GD   L  S+ G      FSI+ ++G 
Sbjct: 1355 --PKSILSVDV--LENMRVGELVSSVTATDSDSGDNADLHYSITGTNNHGTFSISPNTGS 1410

Query: 199  ISIVDLSALNTSTI-QLVVVATDTGNPPRQASVPAIMH 235
            I +       T ++ +L + A D G PPR +++  +++
Sbjct: 1411 IFLAKKLDFETQSLYKLNITAKDQGRPPRSSTMSVVIY 1448



 Score = 48.1 bits (113), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 40/128 (31%), Positives = 64/128 (50%), Gaps = 11/128 (8%)

Query: 56   ENLPVNYVLLTVTTNKPR---DLRVKYWLSNDYGERFSISR-QGDISLMQCLDYETEDSY 111
            EN P++ V+       P    +  ++Y L    G +FSI    G++ L+  LD E   +Y
Sbjct: 2100 ENTPIDTVVFKAQATDPDSGPNSYIEYSLLRPLGNKFSIGTIDGEVRLIGELDREAVSNY 2159

Query: 112  RFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKV 168
              TV ATD     +++S  V + V+++ND +P F    Y + L    L     G+ + +V
Sbjct: 2160 TLTVVATDKGQPSLSSSTDVIVIVLDINDNNPIFAQKLYRVELEENTLT----GTDLIQV 2215

Query: 169  EAADGDKG 176
             AADGD+G
Sbjct: 2216 LAADGDEG 2223



 Score = 48.1 bits (113), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 44/139 (31%), Positives = 74/139 (53%), Gaps = 14/139 (10%)

Query: 95   GDISLMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFL 151
            G I++ + LD E + SY  TV ++D   +  T + TVNI + +VND+ P F    Y +  
Sbjct: 2233 GVITVAKPLDRERKPSYMLTVQSSDRGSSPRTDTTTVNIVLKDVNDYIPTFELSPYNV-- 2290

Query: 152  PHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSINDSGHISIVDLSALN 208
             ++P    T   VI +V A D D+G    L+   + G  E  F+++ SG + +V   +L+
Sbjct: 2291 -NVPENLETLPKVILQVVARDDDQGLNSKLTYVLVSGNEEGAFTLSASGELRLV--QSLD 2347

Query: 209  TSTIQ---LVVVATDTGNP 224
              T +   L++ A D+G+P
Sbjct: 2348 RETKEQYVLLITAADSGSP 2366



 Score = 47.0 bits (110), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 60/226 (26%), Positives = 91/226 (40%), Gaps = 35/226 (15%)

Query: 44   QFSKNEYSVSALENL-PVNYVLLTVTTNKPRDL--RVKYWLSND--YGERFSISRQGDIS 98
            +FSK  YS    E+  P + V   + T+    +   + Y +S D   G  F     G  +
Sbjct: 1879 KFSKPVYSFDIPEDATPGSLVAAILATDDDSGINGEITYTVSEDDEEGMFFLNPVTGVFN 1938

Query: 99   LMQCLDYETEDSYRFTVYATDTL-MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLA 157
            L + LDYE +  Y  T+ A D     T+  V  +++++ND  P F    Y   L    + 
Sbjct: 1939 LTRALDYEAQQYYILTIRAEDGGGQFTTIRVYFNILDINDNPPVFSMTSYSTSL----ME 1994

Query: 158  DLTPGSVIGKVEAADGDKGDRVTLSLR---GPYEKMFSINDSGHISIV------------ 202
            +L PGS I      D D G    LS     G     F I++SG +SI             
Sbjct: 1995 NLAPGSAILNFSVTDADDGSNSQLSFSIASGDSVGHFGIDNSGVLSIQQPLDREKQSFYS 2054

Query: 203  ------DLSALN----TSTIQLVVVATDTGNPPRQASVPAIMHFPE 238
                  D++ L     TST Q+ ++  D  + P     P + + PE
Sbjct: 2055 LVVQVHDMAPLPASRYTSTAQVSIILLDVNDSPPSFISPKLTYIPE 2100



 Score = 46.2 bits (108), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 51/191 (26%), Positives = 84/191 (43%), Gaps = 16/191 (8%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPR---DLRVKYWLSNDYGERFSIS-RQGDISLM 100
            FS  +Y    LEN P    ++ +  +      +  + Y + +   + F I    G I+  
Sbjct: 3218 FSPEDYFPKVLENAPSGTTVIRLNASDADSGPNAVIAYAIQSSDSDLFVIDPNTGTITTQ 3277

Query: 101  QCLDYETEDSYRFTVYA---TDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLA 157
              LDYET+ SY  T+ A    D    + A+VNI +   N++ PRF    Y   +      
Sbjct: 3278 GFLDYETKQSYHLTIKAFNVPDEERCSFASVNIQLEGTNEYVPRFVSKLYYFEVSEA--- 3334

Query: 158  DLTPGSVIGKVEAAD---GDKGDRVTLSLRGPYEKMFSIND-SGHISIVD-LSALNTSTI 212
              + G+++G+V A+D   G  G+   L      +K F I+  SG I +   L       I
Sbjct: 3335 -ASEGTIVGEVFASDRDLGTDGEVHYLIFGNSRKKGFQIDGRSGQIYVSGPLDREKEERI 3393

Query: 213  QLVVVATDTGN 223
             L V+A ++G+
Sbjct: 3394 SLRVLAKNSGS 3404



 Score = 41.2 bits (95), Expect = 0.77,   Method: Compositional matrix adjust.
 Identities = 65/245 (26%), Positives = 102/245 (41%), Gaps = 43/245 (17%)

Query: 11  ITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNE-YSVSALENLPVNYVLLTVTT 69
           + L + A     Q +++ A L+V+    +  +  FS+ E Y VS  EN P    LL ++ 
Sbjct: 576 VVLNISARDQGVQPKFSYAQLVVTILDVNDNKPCFSQPEGYQVSLAENSPSGTELLVLSA 635

Query: 70  NKPRDLRVKYWLSNDYGERFSIS----------------RQ--------GDISLMQCLDY 105
                  V   L ++   RFS+                 RQ        G +S +  LD 
Sbjct: 636 -------VDGDLGDNGTIRFSLQEAEPGVVAVGPSSVTPRQVFRLDPVSGKLSTISQLDR 688

Query: 106 ETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPG 162
           E +  +   V ATD     +++ A VN+S+++VND  P F   QY     HI   +   G
Sbjct: 689 EEQAHFSLQVLATDLGSPPLSSVARVNVSLLDVNDNSPVFYPVQY---FAHI-QENEPAG 744

Query: 163 SVIGKVEAADGDKGDRVTL--SLRGPYEKMFSINDSGHI--SIVDLSALNTSTIQLVVVA 218
           + +  V A D D G   T+  S+       F ++    I  + + L     +  QL VVA
Sbjct: 745 TYVTTVSATDPDMGPNGTVKYSISAGDTSRFQVHSKTGIITTKIALDREERTAYQLQVVA 804

Query: 219 TDTGN 223
           TD G+
Sbjct: 805 TDGGH 809



 Score = 41.2 bits (95), Expect = 0.90,   Method: Compositional matrix adjust.
 Identities = 45/142 (31%), Positives = 70/142 (49%), Gaps = 20/142 (14%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVT-----TNKPRDLRVKYWLSNDYGERFSIS-RQGDIS 98
            F K+  SV  LEN+ V  ++ +VT     +    DL      +N++G  FSIS   G I 
Sbjct: 1354 FPKSILSVDVLENMRVGELVSSVTATDSDSGDNADLHYSITGTNNHGT-FSISPNTGSIF 1412

Query: 99   LMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELF---LP 152
            L + LD+ET+  Y+  + A D      +++ +V I V + ND  P F  P  ++F   + 
Sbjct: 1413 LAKKLDFETQSLYKLNITAKDQGRPPRSSTMSVVIYVRDFNDNPPNF--PAGDIFKSIIE 1470

Query: 153  HIPLADLTPGSVIGKVEAADGD 174
            +IP+     GS +  V A D D
Sbjct: 1471 NIPV-----GSSVISVTANDSD 1487



 Score = 40.8 bits (94), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 51/182 (28%), Positives = 83/182 (45%), Gaps = 21/182 (11%)

Query: 95  GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPR--FRY-PQYE 148
           G I + + LDYE    Y  TV ATD     ++  A   I +++VND +PR  FRY P   
Sbjct: 302 GVIRIREHLDYELCQQYSLTVQATDRGVPALSGRAEALIRLLDVNDNEPRVKFRYFPATS 361

Query: 149 LFLPHIPLADLTPGSVIGKVEAADGDK----GDRVTLSLRGPYEKMFSINDSG--HISIV 202
            F      A   PG+V+  +  +D D     G+     L G  ++ F ++ S   ++S++
Sbjct: 362 RFASVDENA--APGTVVALLTVSDADSPAANGNISVSILAGNEQRHFEVHSSKVPNLSLI 419

Query: 203 DL-SALNTSTIQL----VVVATDTGNPPRQASVPAIMHFPEAIVQQASSKLNSGTSSTVL 257
            + +AL+   I      V VA + G  P    +P     P+ +V    S+  S  +S V+
Sbjct: 420 KVAAALDRERIPAYNLTVAVADNYGASPSPPGLPTSSLSPDGVVATPVSR--SSVASLVI 477

Query: 258 II 259
            +
Sbjct: 478 FV 479



 Score = 38.5 bits (88), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 38/124 (30%), Positives = 64/124 (51%), Gaps = 13/124 (10%)

Query: 111  YRFTVYATD----TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIG 166
            +  TV ATD      +   ATV I + ++ND  P+F    Y+  +  +  A+LT    + 
Sbjct: 1214 FSLTVIATDQGLPKPLKDQATVQIYMKDINDNAPKFLKDLYQATVSEL-AANLTQ---VL 1269

Query: 167  KVEAADGDKGDRVTLS---LRGPYEKMFSINDS-GHISIV-DLSALNTSTIQLVVVATDT 221
            +V A+D D+G    +    ++G  EK F+I+ S G +++V  L    T++  LV+ A D+
Sbjct: 1270 RVSASDVDEGTNGLIHYSVIKGNEEKQFAIDSSTGQVTLVGKLDHEATASYSLVIQAVDS 1329

Query: 222  GNPP 225
            G  P
Sbjct: 1330 GAVP 1333


>gi|444713194|gb|ELW54102.1| Protocadherin gamma-A5 [Tupaia chinensis]
          Length = 812

 Score = 65.9 bits (159), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 63/197 (31%), Positives = 91/197 (46%), Gaps = 23/197 (11%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWLSND---YGERFSI-SRQGD 96
           QF++ EY V+  EN+PV   LLTVT   P +    ++ Y   N+     E F + S  G+
Sbjct: 240 QFTRPEYRVNIPENIPVGTRLLTVTATDPDEGMNGKLTYSFRNEEDKISETFHLDSNLGE 299

Query: 97  ISLMQCLDYETEDSYRFTVYATD-TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIP 155
           IS  Q LDYE    Y   V A D   +  SA V ++V +VND  P       EL L  + 
Sbjct: 300 ISTRQSLDYEESRFYLMEVVAQDGGALLASAKVLVTVQDVNDNAP-------ELLLTSLT 352

Query: 156 LA---DLTPGSVIGKVEAADGDKGD----RVTLSLRGPYEKMFSINDSGH-ISIVDLSAL 207
                D  PG+VI      DGD G+      ++S   P++   S+++  H ++ + L   
Sbjct: 353 STVSEDCLPGTVIALFSVHDGDSGENGETECSISRNLPFKLEKSVDNYYHLLTAMALDRE 412

Query: 208 NTSTIQLVVVATDTGNP 224
            TS   + V   D G P
Sbjct: 413 ETSDYNITVTVMDRGTP 429



 Score = 48.1 bits (113), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 68/274 (24%), Positives = 123/274 (44%), Gaps = 45/274 (16%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKP---RDLRVKYWLSNDYGERFSISR-------Q 94
           FS+  YS S  EN P    + +VT + P    + ++ Y L  D  +   +S         
Sbjct: 451 FSRASYSTSIPENNPRGVSIFSVTASDPDSGSNAQITYSLMEDASQGVPLSSYVSINSDT 510

Query: 95  GDISLMQCLDYETEDSYRFTVYATDTL---MTTSATVNISVVNVNDWDPRFRYPQYELFL 151
           G +  ++  DYE     +  V A+D+    ++++ ++++ V++ ND  P   YP     L
Sbjct: 511 GVLYALRSFDYEQLRDLQLWVTASDSGTPPLSSNVSLSLFVLDQNDNVPEILYPT----L 566

Query: 152 P-----HIPLA--DLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-DSGHI- 199
           P      + LA     PG ++ KV A D D G    LS   L+     +F +   +G + 
Sbjct: 567 PIDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYRLLKASEPGLFMVGLHTGEVR 626

Query: 200 ---SIVDLSALNTSTIQLVVVATDTGNPPRQASVPAIMHFPEAI---------VQQASSK 247
              +++D  AL  S   L++   D G PP  A++   +   ++I         ++ ++ +
Sbjct: 627 TARALLDRDALKQS---LLLSVQDHGQPPLSATITLTVAIADSIPDVLTDLGRLKPSADQ 683

Query: 248 LNSG-TSSTVLIILGVVLIVLGFVIILLILYIHK 280
            +SG T   V+ +  V  + L FVI+LL L + +
Sbjct: 684 DDSGLTLYLVVAVAVVSCVFLAFVIVLLALRLRR 717


>gi|391332942|ref|XP_003740885.1| PREDICTED: protein dachsous-like [Metaseiulus occidentalis]
          Length = 3117

 Score = 65.9 bits (159), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 53/141 (37%), Positives = 70/141 (49%), Gaps = 11/141 (7%)

Query: 95   GDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFL-PH 153
            G I+L + LD+ET+++Y  TV  TD   T   T+ I V++VND  P F    Y + L  H
Sbjct: 2290 GAITLSKPLDFETQNNYSVTVMVTDGAHTAETTLTIDVLDVNDRTPIFSSTSYSVVLNGH 2349

Query: 154  IPLADLTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSINDSGHISIVDLSALNTST 211
                 LT       V A D D GD  RV  SL  P E +     SG + + D  +L  S 
Sbjct: 2350 QATKLLT-------VAATDADSGDNGRVKYSLEPPSELVKIDEWSGQLFLRDEISLRKSF 2402

Query: 212  IQLV-VVATDTGNPPRQASVP 231
            +    V+  D G+P RQASVP
Sbjct: 2403 VSYSNVIVRDLGSPARQASVP 2423



 Score = 55.1 bits (131), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 59/199 (29%), Positives = 91/199 (45%), Gaps = 18/199 (9%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVT---TNKPRDLRVKYWL--SNDYGERFSI-SRQGDIS 98
            F    Y +S  E++ V+   L VT   ++   + R+ Y L  S      F I    G + 
Sbjct: 970  FEYESYRISVEESMEVDTEFLRVTAADSDSGNNARLTYRLVDSPAASSTFGIYPNTGYVY 1029

Query: 99   LMQCLDYETEDSYRFTVYATDTL---MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIP 155
            L + LD ETEDSY   V A D     ++ S TV I+V + ND +P+F    +E  +    
Sbjct: 1030 LRESLDRETEDSYTIQVEAVDNGNPPLSASTTVFIAVSDANDNEPQFVRDMFEFAVEE-- 1087

Query: 156  LADLTPGSVIGKVEAADGDKGDRVTL--SLRGPYEKMFSIND-SGHISIVD-LSALNTST 211
              +   G  +G++ A D D GD   +  SL    ++ FSIN  +G +   + L     S 
Sbjct: 1088 --NAESGRSVGEIRAIDKDLGDNAAIRYSLLSNIDE-FSINPMTGEMHTKNRLDREKRSN 1144

Query: 212  IQLVVVATDTGNPPRQASV 230
             + +V A D G  P+ + V
Sbjct: 1145 YECIVEAQDQGAKPKSSRV 1163



 Score = 55.1 bits (131), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 59/201 (29%), Positives = 87/201 (43%), Gaps = 21/201 (10%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGERFSI-SRQGDISL 99
            QF  +EYS    E+  +   +L V     ++  +  V Y L N     FSI S  G I  
Sbjct: 1816 QFEHSEYSPQVREDAEIGTEVLMVNAHDIDEKNNGEVTYSLINATNSLFSIDSETGRIYT 1875

Query: 100  MQCLDYETEDSYRFTVYATD----TLMTTSATVNISVVNVNDWDPRF-RYPQYELFLPHI 154
                D E E  Y   V A+D       + SATV+I++ + ND  P F RYP    F   I
Sbjct: 1876 TGQFDRENEPRYTLEVRASDRGSYETRSHSATVHIAITDANDNKPIFVRYP----FFAEI 1931

Query: 155  PLADLTPGSVIGKVEAADGDKGDR-----VTLSLRGPYEKMFSIN-DSGHISIV-DLSAL 207
              AD   G+ +  V A D D+  R      + S  G +   F IN  +G +++   +   
Sbjct: 1932 -RADAQIGTHVEHVVAEDDDEEGRNSDIIYSFSESGVHSDYFHINPHTGEVTLARRVHKF 1990

Query: 208  NTSTIQLVVVATDTGNPPRQA 228
                + L +VA+D G  P+ +
Sbjct: 1991 EGKVLHLEIVASDQGEHPKSS 2011



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 52/176 (29%), Positives = 80/176 (45%), Gaps = 19/176 (10%)

Query: 76   RVKYWLSNDYGERFSIS-RQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNIS 131
            R+ Y L+ +  E F ++ R G I L + LDYE    +R TV A D        + T+ + 
Sbjct: 901  RISYSLAEE-SENFKVNERSGAIILKRSLDYELRQQHRLTVIAEDGATPARRNNMTLLVE 959

Query: 132  VVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR----GPY 187
            V ++ND  P F Y  Y + +      D    +   +V AAD D G+   L+ R       
Sbjct: 960  VQDINDNTPVFEYESYRISVEESMEVD----TEFLRVTAADSDSGNNARLTYRLVDSPAA 1015

Query: 188  EKMFSIN-DSGHISI---VDLSALNTSTIQLVVVATDTGNPPRQASVPAIMHFPEA 239
               F I  ++G++ +   +D    ++ TIQ  V A D GNPP  AS    +   +A
Sbjct: 1016 SSTFGIYPNTGYVYLRESLDRETEDSYTIQ--VEAVDNGNPPLSASTTVFIAVSDA 1069



 Score = 51.6 bits (122), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 65/237 (27%), Positives = 104/237 (43%), Gaps = 33/237 (13%)

Query: 13   LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKN-------EYSVSALENLPVNYVLL 65
             +VRA    N   Y LA+L+    G +++    + N        Y+ S  E  P+  V+ 
Sbjct: 2616 FIVRATDTKN---YVLASLV----GVTIKVKDENDNPPVFPVTRYNESIPEASPIGTVIF 2668

Query: 66   TVTTNKPRDLRVKYW------LSNDYGERFSIS-RQGDISLMQCLDYETEDSYRFTVYAT 118
            T   N  RD R  +       L  +  E+FSI  R G +S     DYE++  + FT+ AT
Sbjct: 2669 TARAND-RD-RGHFGTLNYTILEGEAREKFSIDPRSGLVSSNIVFDYESKKHHYFTIAAT 2726

Query: 119  DTLMTTS-ATVNISVVNVNDWDPRFRYPQYELFLP-HIPLADLTPGSVIGKVEAADGDKG 176
            D    T+   V + ++  +++ P F  P Y   +P + P+     G  +G+VEA D D G
Sbjct: 2727 DAGGKTAHVQVQVDIIGKDEYPPEFLKPVYHFTVPGNAPI-----GYSVGRVEATDIDSG 2781

Query: 177  DRVTLSLRGPYEKM-FSIND-SGHISIVDLSALNTSTIQLVV-VATDTGNPPRQASV 230
                ++    Y    F++N  +G I +V     N   I+L + +   TG      SV
Sbjct: 2782 QDGVVTYWMHYPNYNFNVNSTTGVIYVVKPMGSNERVIELTLSIEAGTGRTASSTSV 2838



 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 46/140 (32%), Positives = 66/140 (47%), Gaps = 13/140 (9%)

Query: 95   GDISLMQCLDYETEDSYRFTVYATDTLMTTS----ATVNISVVNVNDWDPRFRYPQYELF 150
            G++   + LD E  D Y  TV+      + S    ATV + V++VND  P F    Y L 
Sbjct: 1663 GELRTTRPLDRERVDRYNLTVFGDHNTYSASQYDSATVIVDVLDVNDNVPDFGESCYNLS 1722

Query: 151  LPHIPLADLTPGSVIGKVEAAD---GDKGDRVTLSLRGPYEKMFSIND-SGHISIVDLSA 206
            +P     +    S I ++ AAD   G+ G+ V     G    +FSI   SG++S   L  
Sbjct: 1723 VP-----ENREWSFIHRLHAADDDLGENGEIVYSIEEGNVGNVFSIAPLSGNLSCKALDR 1777

Query: 207  LNTSTIQLVVVATDTGNPPR 226
             + S   LVV+A D G PP+
Sbjct: 1778 ESASEYSLVVLAQDRGAPPK 1797



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 51/160 (31%), Positives = 77/160 (48%), Gaps = 15/160 (9%)

Query: 45   FSKNEYSVSALENLPVN-YVLLTVTTNKPRDLRVKYWL-SNDYGERFSISR-QGDISLMQ 101
            F KN Y +S  E   V   VL  V  ++  D  V Y + S +    F+I +  G I L++
Sbjct: 2545 FIKNRYEISLSEYTKVGTSVLSVVAEDRDCDSEVNYDITSGNELNHFAIDKLDGSIFLLK 2604

Query: 102  CLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLAD 158
             LD++    ++F V ATDT   ++ +   V I V + ND  P F   +Y   +P     +
Sbjct: 2605 ELDFDRAGEFKFIVRATDTKNYVLASLVGVTIKVKDENDNPPVFPVTRYNESIP-----E 2659

Query: 159  LTP-GSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN 194
             +P G+VI    A D D+G   TL+   L G   + FSI+
Sbjct: 2660 ASPIGTVIFTARANDRDRGHFGTLNYTILEGEAREKFSID 2699



 Score = 48.1 bits (113), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 52/213 (24%), Positives = 99/213 (46%), Gaps = 26/213 (12%)

Query: 45  FSKNEYSVSALENLPVNYVLLTV---TTNKPRDLRVKYWLSNDYGER---FSIS-RQGDI 97
           FS+  Y  +  EN  V   +L V    T++ R+  V+Y ++    +R   F+I  + G+I
Sbjct: 234 FSQGNYVATIAENATVGTSVLRVLATDTDEGRNGEVRYSINRRQSDREQYFNIDPKSGEI 293

Query: 98  SLMQCLDYETEDSYRFTVYATDTL---MTTSATVNISVVNVNDWDPRFRYPQYELFLPHI 154
            + + LD+ET++S+   V A D     + T+  V+I + ++ND  P        +FL   
Sbjct: 294 FVNKPLDFETKESHELVVVARDNGLQPLETTTFVSIKISDINDNTPTISL----IFLSDD 349

Query: 155 PLA----DLTPGSVIGKVEAADGDKGDR------VTLSLRGPYEKMFSINDSGHISIVD- 203
             +    D   G  +G++  +D D  +       VTL     +  ++S ++  ++ +V+ 
Sbjct: 350 ASSRIREDAKVGDFVGRISVSDPDSREEYANLINVTLHGGDGHFGLYSKDNVIYLMVVNV 409

Query: 204 -LSALNTSTIQLVVVATDTGNPPRQASVPAIMH 235
            L     +   + ++ATD G PP + S    +H
Sbjct: 410 PLDRERQANFTMTIMATDQGIPPLKTSKQFTLH 442



 Score = 47.4 bits (111), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 69/260 (26%), Positives = 112/260 (43%), Gaps = 24/260 (9%)

Query: 12   TLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYV---LLTVT 68
            T+ V A+   N    A  T+ ++ +  +  E QF ++ +  +  EN         +  + 
Sbjct: 1043 TIQVEAVDNGNPPLSASTTVFIAVSDANDNEPQFVRDMFEFAVEENAESGRSVGEIRAID 1102

Query: 69   TNKPRDLRVKYWLSNDYGERFSIS-RQGDISLMQCLDYETEDSYRFTVYATDTLM---TT 124
             +   +  ++Y L ++  E FSI+   G++     LD E   +Y   V A D      ++
Sbjct: 1103 KDLGDNAAIRYSLLSNIDE-FSINPMTGEMHTKNRLDREKRSNYECIVEAQDQGAKPKSS 1161

Query: 125  SATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGD--RVTLS 182
              TV + V++ ND  P F   Q   F   +   D   GS +G++ A+D D+G    V   
Sbjct: 1162 RVTVRVRVLDKNDNAPLFADNQETSF---VLRRDEPAGSEVGQIRASDADEGTNAEVVYE 1218

Query: 183  LRG---PYE--KMFSINDSGHISI-VDLSALNTSTIQLVVVATDTGNPPRQASVPAIMHF 236
            L     P +  K F+IN  G I    +LS        L VVA D G+P  ++ V   +  
Sbjct: 1219 LEATGFPTDGVKFFTINTDGLIKTKTELSQGKQKEYALRVVAKDLGSPSLESKVDIRI-- 1276

Query: 237  PEAIVQQASSKLNSGTSSTV 256
                +Q  + KL S  SSTV
Sbjct: 1277 ---TLQDPNDKLLSFYSSTV 1293



 Score = 43.9 bits (102), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 47/154 (30%), Positives = 73/154 (47%), Gaps = 12/154 (7%)

Query: 77  VKYWLSNDYGERFSISR-QGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISV 132
           ++Y L ND    F I    G ++    +D ET  S   TV A D     ++++A + ++V
Sbjct: 488 LRYELQNDINGWFKIDPVSGIVTTKSFIDCETNPSPVLTVVARDKGSPSLSSTAKLTVTV 547

Query: 133 VNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR-GPYEK-M 190
            +VND +P F    Y + +P     D   G+ + KV A+D D G    ++   GP     
Sbjct: 548 SDVNDNEPLFDQSYYNVTVPE----DARIGACVLKVAASDPDCGVNAVVNFTLGPTSSPS 603

Query: 191 FSIN-DSGHISI-VDLSALNTSTIQLVVVATDTG 222
           F I+  SG + I   L     ST ++ V+ATD G
Sbjct: 604 FRIDARSGELCIAAKLDREERSTYEIPVLATDRG 637



 Score = 43.9 bits (102), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 55/201 (27%), Positives = 92/201 (45%), Gaps = 12/201 (5%)

Query: 29  ATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPR---DLRVKYWLSNDY 85
           A L V+ +  +  E  F ++ Y+V+  E+  +   +L V  + P    +  V + L    
Sbjct: 541 AKLTVTVSDVNDNEPLFDQSYYNVTVPEDARIGACVLKVAASDPDCGVNAVVNFTLGPTS 600

Query: 86  GERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDT-LMTTSATVNISVVNVNDWDPRFR 143
              F I +R G++ +   LD E   +Y   V ATD   ++T+  V + V+++ND  P F 
Sbjct: 601 SPSFRIDARSGELCIAAKLDREERSTYEIPVLATDRGGLSTATVVKVHVLDINDHRPVFN 660

Query: 144 YPQYELFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIN-DSGHIS 200
              Y + L       + P   I  V A D D+G   +V+  +     ++F I+ DSG I 
Sbjct: 661 PVVYNVSLYEFYDQTVQP---IVVVVAEDRDEGLNGQVSYRIVEGNHQLFRIDPDSGGIH 717

Query: 201 IVD-LSALNTSTIQLVVVATD 220
           +   L   + S+  LVV A D
Sbjct: 718 VTSTLRRGSGSSHHLVVSAQD 738



 Score = 43.5 bits (101), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 54/213 (25%), Positives = 90/213 (42%), Gaps = 19/213 (8%)

Query: 25   RYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVT----TNKPRDLRVKYW 80
            R A   L +  +  + +   FS+  Y++   E+ P+   +  +T         DL++ Y 
Sbjct: 2418 RQASVPLRIQASSLAKKPYSFSEKNYTIQISESAPIGAQVFNLTKEDSARATSDLKLSYE 2477

Query: 81   L-SNDYGERFSIS-RQGDISLMQCLDYETEDSYRFTVYA----TDTLMTTSATVNISVVN 134
            + + + G  F +    G + L + LD E  + Y   + A      T +  S  V+I VV+
Sbjct: 2478 IFAGNEGGNFVVDFNSGTVFLAKKLDRELRNHYELKLVAYPFRQQTSVNVSTVVHIEVVD 2537

Query: 135  VNDWDPRFRYPQYELFLPHIPLADLTP-GSVIGKVEAADGDKGDRVTLSLRGPYE-KMFS 192
            VND  P F   +YE     I L++ T  G+ +  V A D D    V   +    E   F+
Sbjct: 2538 VNDSPPVFIKNRYE-----ISLSEYTKVGTSVLSVVAEDRDCDSEVNYDITSGNELNHFA 2592

Query: 193  IN--DSGHISIVDLSALNTSTIQLVVVATDTGN 223
            I+  D     + +L        + +V ATDT N
Sbjct: 2593 IDKLDGSIFLLKELDFDRAGEFKFIVRATDTKN 2625



 Score = 42.4 bits (98), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 44/139 (31%), Positives = 68/139 (48%), Gaps = 9/139 (6%)

Query: 94  QGDISLMQCLDYETEDSYRFTVYATDT--LMTTSATVNISVVNVNDWDPRFRYPQYELFL 151
           +G IS+ + LD+E+  S   +V AT    L    A VNIS+++VND  PRF      + +
Sbjct: 817 RGLISVEKPLDFESASSVLLSVQATSGVPLSFGHAQVNISILDVNDNSPRFESNFVRMSV 876

Query: 152 PHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSGHISIVDLSALNTST 211
           P    + L+P   +   +A  G+ G R++ SL    E  F +N+     I+  S L+   
Sbjct: 877 PENS-SLLSPVYFVHAQDADSGENG-RISYSLAEESEN-FKVNERSGAIILKRS-LDYEL 932

Query: 212 IQ---LVVVATDTGNPPRQ 227
            Q   L V+A D   P R+
Sbjct: 933 RQQHRLTVIAEDGATPARR 951



 Score = 41.2 bits (95), Expect = 0.78,   Method: Compositional matrix adjust.
 Identities = 41/135 (30%), Positives = 62/135 (45%), Gaps = 23/135 (17%)

Query: 103 LDYETEDSYRFTVYATDTL---MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADL 159
           LD E + ++  T+ ATD     + TS    + + +VND  PRF   +Y   +P +     
Sbjct: 411 LDRERQANFTMTIMATDQGIPPLKTSKQFTLHISDVNDNAPRFTQSEYFANIPEVA---- 466

Query: 160 TPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSGHISIVDLSALNTS--------- 210
            PG  + ++ A D D+G  V  +LR  YE    IN  G   I  +S + T+         
Sbjct: 467 EPGFSVVRIRATDRDEG--VNAALR--YELQNDIN--GWFKIDPVSGIVTTKSFIDCETN 520

Query: 211 -TIQLVVVATDTGNP 224
            +  L VVA D G+P
Sbjct: 521 PSPVLTVVARDKGSP 535


>gi|348563331|ref|XP_003467461.1| PREDICTED: protocadherin-7-like isoform 3 [Cavia porcellus]
          Length = 1256

 Score = 65.9 bits (159), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 62/203 (30%), Positives = 92/203 (45%), Gaps = 21/203 (10%)

Query: 37  GTSLRELQFSKNEYSVSALENLPVNYV--LLTVTTNKPRDLRVKYWLSNDYGERFSIS-R 93
           G S+ E+ F +N        N+P   V  +L    +  ++  + Y L +     F+I   
Sbjct: 537 GQSVVEVYFPEN--------NIPGERVATVLATDADSGKNAEIAYSLDSAVMGIFAIDPD 588

Query: 94  QGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELF 150
            GDI +   LD E  D Y F V A D    ++  S TV + V + ND DP+F    +  +
Sbjct: 589 SGDILVNTVLDREQTDRYEFKVNAKDKGIPVLQGSTTVIVQVADKNDNDPKFMQDIFTFY 648

Query: 151 LPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSI-NDSGHI-SIVDLSAL 207
           +      +L P S +G V   D DKG    +SL       +FSI ND+G I S +     
Sbjct: 649 VKE----NLQPNSPVGMVTVMDADKGRNAEMSLYIEENSNIFSIENDTGTIYSTMSFDRE 704

Query: 208 NTSTIQLVVVATDTGNPPRQASV 230
           + +T    V A D G+PPR A+ 
Sbjct: 705 HQTTYTFRVKAVDGGDPPRSATA 727



 Score = 45.8 bits (107), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 79/318 (24%), Positives = 137/318 (43%), Gaps = 50/318 (15%)

Query: 30  TLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVT---TNKPRDLRVKYWLSNDYG 86
           T+IV  A  +  + +F ++ ++    ENL  N  +  VT    +K R+  +  ++  +  
Sbjct: 625 TVIVQVADKNDNDPKFMQDIFTFYVKENLQPNSPVGMVTVMDADKGRNAEMSLYIEEN-S 683

Query: 87  ERFSISRQ-GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRF 142
             FSI    G I      D E + +Y F V A D      + +ATV++ V++ ND  P  
Sbjct: 684 NIFSIENDTGTIYSTMSFDREHQTTYTFRVKAVDGGDPPRSATATVSLFVMDENDNAPTV 743

Query: 143 RYPQ---YELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIND- 195
             P+   Y L  P   +      +V+  V A D D G    L+   + G   K+F I+  
Sbjct: 744 TLPRNISYTLLPPSSNVR-----TVVATVLATDSDDGINADLNYSIVGGNPFKLFEIDST 798

Query: 196 SGHISIV-DLSALNTSTIQLVVVATDTGNPPRQASVPAIMHF--------PEAIVQQASS 246
           SG +S+V  L+  +    +LVV   D+G P +  S  A++H            I  Q + 
Sbjct: 799 SGVVSLVGKLTHKHYGLHRLVVQVNDSGQPSQ--STTALVHVFVNESVSNATVIDSQIAR 856

Query: 247 KLNSGTSSTVL-------------IILGVVLIVLGFVIILLILYIHKNKHTKN-NGPPGS 292
            L++  +  +              I++GVV  ++  ++I+LI+ + +   +KN NG    
Sbjct: 857 SLHTPLTQDIAGDPSYEISKQRLSIVIGVVAGIMTVILIILIVVMARYCRSKNKNGYEAG 916

Query: 293 SHSKNDSFLSNVILPEKH 310
                D F      P++H
Sbjct: 917 KKDHEDFF-----TPQQH 929



 Score = 43.1 bits (100), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 41/150 (27%), Positives = 69/150 (46%), Gaps = 26/150 (17%)

Query: 93  RQGDISLMQCLDYETEDSYRFTVY---ATDTLMTTSATVNISVVNVNDWDPRFRYPQYEL 149
           +Q  + +   LD E  DSY  T+      D   ++ A + + + +VND  PRF    YE 
Sbjct: 257 KQPQLIVKGALDREQRDSYELTLRVRDGGDPPRSSQAILRVLITDVNDNSPRFEKSVYEA 316

Query: 150 FLPHIPLADLTPGSVIGKVEAADGDKG---------DRVTLSLRGPYEKMFSIND-SGHI 199
            L      +  PG+ I ++ AAD D G            T S+R    ++  +++ SG +
Sbjct: 317 DLAE----NSAPGTPILQLRAADLDVGVNGQIEYVFGAATESVR----RLLRLDETSGWL 368

Query: 200 SI---VDLSALNTSTIQLVVVATDTGNPPR 226
           S+   +D   +N   ++  V+A D G PP+
Sbjct: 369 SVLHRIDREEVN--QLRFTVMARDRGQPPK 396


>gi|351715176|gb|EHB18095.1| Protocadherin-7 [Heterocephalus glaber]
          Length = 1133

 Score = 65.9 bits (159), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 62/203 (30%), Positives = 92/203 (45%), Gaps = 21/203 (10%)

Query: 37  GTSLRELQFSKNEYSVSALENLPVNYV--LLTVTTNKPRDLRVKYWLSNDYGERFSIS-R 93
           G S+ E+ F +N        N+P   V  +L    +  ++  + Y L +     F+I   
Sbjct: 422 GQSVVEVYFPEN--------NIPGQRVATVLATDADSGKNAEIAYSLDSALMGIFAIDPD 473

Query: 94  QGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELF 150
            GDI +   LD E  D Y F V A D    ++  S TV + V + ND DP+F    +  +
Sbjct: 474 SGDILVNTVLDREQTDRYEFKVNAKDKGIPVLQGSTTVIVQVADKNDNDPKFMQDIFTFY 533

Query: 151 LPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSI-NDSGHI-SIVDLSAL 207
           +      +L P S +G V   D DKG    +SL       +FSI ND+G I S +     
Sbjct: 534 VKE----NLQPNSPVGMVTVMDSDKGRNAEMSLYIEENSNIFSIENDTGTIYSTMSFDRE 589

Query: 208 NTSTIQLVVVATDTGNPPRQASV 230
           + +T    V A D G+PPR A+ 
Sbjct: 590 HQTTYTFRVKAVDGGDPPRSATA 612



 Score = 45.8 bits (107), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 79/318 (24%), Positives = 138/318 (43%), Gaps = 50/318 (15%)

Query: 30  TLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVT---TNKPRDLRVKYWLSNDYG 86
           T+IV  A  +  + +F ++ ++    ENL  N  +  VT   ++K R+  +  ++  +  
Sbjct: 510 TVIVQVADKNDNDPKFMQDIFTFYVKENLQPNSPVGMVTVMDSDKGRNAEMSLYIEEN-S 568

Query: 87  ERFSISRQ-GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRF 142
             FSI    G I      D E + +Y F V A D      + +ATV++ V++ ND  P  
Sbjct: 569 NIFSIENDTGTIYSTMSFDREHQTTYTFRVKAVDGGDPPRSATATVSLFVMDENDNAPTV 628

Query: 143 RYPQ---YELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-D 195
             P+   Y L  P   +      +V+  V A D D G    L+   + G   K+F I+  
Sbjct: 629 TLPRNVSYTLLPPSSNVR-----TVVATVLATDSDDGINADLNYSIVGGNPFKLFDIDPT 683

Query: 196 SGHISIV-DLSALNTSTIQLVVVATDTGNPPRQASVPAIMHF--------PEAIVQQASS 246
           SG +S+V  L+  +    +LVV   D+G P +  S  A++H            I  Q + 
Sbjct: 684 SGVVSLVGKLTHKHYGLHRLVVQVNDSGQPSQ--STTALVHVFVNESVSNATVIDSQIAR 741

Query: 247 KLNSGTSSTVL-------------IILGVVLIVLGFVIILLILYIHKNKHTKN-NGPPGS 292
            L++  +  +              I++GVV  ++  ++I+LI+ + +   +KN NG    
Sbjct: 742 SLHTPLTQDIAGDPSYEISKQRLSIVIGVVAGIMTVILIILIVVMARYCRSKNKNGYEAG 801

Query: 293 SHSKNDSFLSNVILPEKH 310
                D F      P++H
Sbjct: 802 KKDHEDFF-----TPQQH 814


>gi|14196471|ref|NP_114443.1| protocadherin gamma-A5 isoform 2 precursor [Homo sapiens]
 gi|5457072|gb|AAD43772.1|AF152512_1 protocadherin gamma A5 short form protein [Homo sapiens]
 gi|85397801|gb|AAI04927.1| Protocadherin gamma subfamily A, 5 [Homo sapiens]
 gi|109730483|gb|AAI13461.1| Protocadherin gamma subfamily A, 5 [Homo sapiens]
 gi|119582342|gb|EAW61938.1| hCG1982215, isoform CRA_q [Homo sapiens]
 gi|313883554|gb|ADR83263.1| Unknown protein [synthetic construct]
          Length = 813

 Score = 65.9 bits (159), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 62/197 (31%), Positives = 91/197 (46%), Gaps = 23/197 (11%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWLSND---YGERFSI-SRQGDI 97
           F+ +EYSVS  EN+PV   LL +T   P +    ++ Y   N+     E F + S  G+I
Sbjct: 242 FTPSEYSVSVPENIPVGTRLLMLTATDPDEGINGKLTYSFRNEEEKISETFQLDSNLGEI 301

Query: 98  SLMQCLDYETEDSYRFTVYATD-TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
           S +Q LDYE    Y   V A D   +  SA V ++V +VND  P       E+ L  +  
Sbjct: 302 STLQSLDYEESRFYLMEVVAQDGGALVASAKVVVTVQDVNDNAP-------EVILTSLTS 354

Query: 157 A---DLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMF----SINDSGH-ISIVDLSALN 208
           +   D  PG+VI      DGD G+   ++   P    F    S+++  H ++  DL    
Sbjct: 355 SISEDCLPGTVIALFSVHDGDSGENGEIACSIPRNLPFKLEKSVDNYYHLLTTRDLDREE 414

Query: 209 TSTIQLVVVATDTGNPP 225
           TS   + +   D G PP
Sbjct: 415 TSDYNITLTVMDHGTPP 431



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 74/285 (25%), Positives = 122/285 (42%), Gaps = 48/285 (16%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPR---DLRVKYWLSNDYGERFSISR-------Q 94
           F +  YS S  EN P    + +VT + P    + RV Y L+ D  +   +S         
Sbjct: 452 FPQASYSTSVTENNPRGVSIFSVTAHDPDSGDNARVTYSLAEDTFQGAPLSSYVSINSDT 511

Query: 95  GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFL 151
           G +  ++  DYE     +  V A+D+    ++++ ++++ V++ ND  P   YP     L
Sbjct: 512 GVLYALRSFDYEQLRDLQLWVTASDSGNPPLSSNVSLSLFVLDQNDNTPEILYPA----L 567

Query: 152 P-----HIPLADLT--PGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-DSGHI- 199
           P      + LA  +  PG ++ KV A D D G    LS   L+     +F++   +G + 
Sbjct: 568 PTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYRLLKASEPGLFAVGLHTGEVR 627

Query: 200 ---SIVDLSALNTSTIQLVVVATDTGNPPRQA----SVPAIMHFPEAIVQQASSKLNSGT 252
              +++D  AL  S   LVV   D G PP  A    +V      P+ +    S K     
Sbjct: 628 TARALLDRDALKQS---LVVAVEDHGQPPLSATFTVTVAVADRIPDILADLGSIKTPIDP 684

Query: 253 SSTVLII------LGVVLIVLGFVIILLILYI---HKNKHTKNNG 288
               L +        V  + L FVI+LL+L +   HK++  +  G
Sbjct: 685 EDLDLTLYLVVAVAAVSCVFLAFVIVLLVLRLRRWHKSRLLQAEG 729



 Score = 38.5 bits (88), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 44/142 (30%), Positives = 62/142 (43%), Gaps = 19/142 (13%)

Query: 103 LDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADL 159
           LD E    Y  T+   D     ++T + + + V +VND  P F    Y        + + 
Sbjct: 410 LDREETSDYNITLTVMDHGTPPLSTESHIPLKVADVNDNPPNFPQASYS-----TSVTEN 464

Query: 160 TP-GSVIGKVEAADGDKGD--RVTLSLR------GPYEKMFSIN-DSGHI-SIVDLSALN 208
            P G  I  V A D D GD  RVT SL        P     SIN D+G + ++       
Sbjct: 465 NPRGVSIFSVTAHDPDSGDNARVTYSLAEDTFQGAPLSSYVSINSDTGVLYALRSFDYEQ 524

Query: 209 TSTIQLVVVATDTGNPPRQASV 230
              +QL V A+D+GNPP  ++V
Sbjct: 525 LRDLQLWVTASDSGNPPLSSNV 546


>gi|426229752|ref|XP_004023519.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin gamma-C4 [Ovis aries]
          Length = 865

 Score = 65.9 bits (159), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 63/230 (27%), Positives = 102/230 (44%), Gaps = 22/230 (9%)

Query: 13  LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKP 72
           LV+ A+   N  R   A L VS    +     F ++ Y +S LE+ P   +L+ +  + P
Sbjct: 210 LVLTAVDGGNPPRSGTAELRVSVLDVNDNAPAFQQSSYRISVLESAPAGMLLIQLNASDP 269

Query: 73  RDL----RVKYWLSNDYGER----FSI-SRQGDISLMQCLDYETEDSYRFTVYATD---T 120
            DL     V +  S    +R    FS+    G ++L   LD+E+E+ Y F V A D    
Sbjct: 270 -DLGPSGNVTFSFSGHTPDRVRSLFSLHPTNGKLTLQGPLDFESENYYEFDVRARDGGSP 328

Query: 121 LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVT 180
            M    ++ + +++VND  P          LP        PG+V+  +   D D G    
Sbjct: 329 AMEQHCSLRVDLLDVNDNAPHITVTSELGTLPE----SAEPGTVVALISVQDPDSGSNGD 384

Query: 181 LSLRGPYEKMFSINDS--GHISIVDLSALN---TSTIQLVVVATDTGNPP 225
           +SLR P    F++  +     S+V    L+    S+  ++V A+D G+PP
Sbjct: 385 VSLRIPDHLPFTLKSAFRNQFSLVTAGPLDREAKSSYDIMVTASDAGSPP 434



 Score = 47.4 bits (111), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 45/169 (26%), Positives = 78/169 (46%), Gaps = 27/169 (15%)

Query: 77  VKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVV 133
           + + L + +  +FS+   G       LD E + SY   V A+D     ++T  T+ +++ 
Sbjct: 393 LPFTLKSAFRNQFSLVTAGP------LDREAKSSYDIMVTASDAGSPPLSTHRTIFLNIS 446

Query: 134 NVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMF 191
           +VND  P F    +E+F+P     +  PG ++  + A+D D G    ++ SL  P  +  
Sbjct: 447 DVNDNPPSFFQRSHEVFVPE----NNRPGDLLCSLAASDPDSGLNALISYSLLEPRNR-- 500

Query: 192 SINDSGHISIVDLSAL----------NTSTIQLVVVATDTGNPPRQASV 230
            ++ S  IS+   +             T T+Q  V A D GNPP  ++V
Sbjct: 501 DVSASSFISLNPQTGAVHATRSFDYEQTQTLQFEVQARDRGNPPLSSTV 549



 Score = 43.5 bits (101), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 49/190 (25%), Positives = 83/190 (43%), Gaps = 15/190 (7%)

Query: 95  GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYE--L 149
           G +   +  DYE   + +F V A D     ++++ TV + V+++ND  P    P+     
Sbjct: 515 GAVHATRSFDYEQTQTLQFEVQARDRGNPPLSSTVTVRLFVLDLNDNAPAVLRPRARPGS 574

Query: 150 FLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIND-SGHISIVDLS 205
             P      +  G ++ KV A D D G    +S   L  P   +F+++  +G +      
Sbjct: 575 LCPQALPPSVGAGHLVTKVTAVDLDSGYNAWVSYQLLEAPDPSLFAVSRYAGEVRTAVPI 634

Query: 206 ALNTSTIQLVVVATDTGNPPRQASVPAIMHFPE---AIVQ--QASSKLNSGTSSTVLIIL 260
             +    +LV+V  D+G+PP   SV  ++   E    +V   + SS    G S   L  L
Sbjct: 635 PADLPPQKLVIVVKDSGSPPLSTSVTLLVSLEEDTHPVVPDLRESSAPREGESRLTL-YL 693

Query: 261 GVVLIVLGFV 270
            V L+ + FV
Sbjct: 694 AVSLVAICFV 703


>gi|440904071|gb|ELR54637.1| Protocadherin Fat 2 [Bos grunniens mutus]
          Length = 4347

 Score = 65.9 bits (159), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 55/193 (28%), Positives = 89/193 (46%), Gaps = 21/193 (10%)

Query: 43   LQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGER---FSISRQ-GDIS 98
            L F ++ YS + +E  PVN+++  ++      L   +W S   G++   F I +  G I 
Sbjct: 1343 LAFDESHYSFTVMETDPVNHMVGVISVEGRPGL---FWFSISGGDKDMDFDIEKTTGSIV 1399

Query: 99   LMQCLDYETEDSYRFTVYATDTLMTTSATVNISVV-NVNDWDPRFRYPQYELFLPHIPLA 157
            + + LD     SY  TV  TD   T +  V I ++ NVN   P+F    YE+ +P     
Sbjct: 1400 IARPLDTRRRSSYNLTVEVTDGFQTIATQVYIVMIANVNHHRPQFLEAHYEVRVPQ---- 1455

Query: 158  DLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSGHISIVDLSALNTSTIQLVVV 217
            D  PG  + +V+A D DKG  +  ++ G         D G  S+  L    +S + + V 
Sbjct: 1456 DTMPGVELLRVQATDQDKGKGLIYTIHGS-------QDPGSASLFQLDP--SSGVLVTVG 1506

Query: 218  ATDTGNPPRQASV 230
              D G+ P Q ++
Sbjct: 1507 KLDLGSGPSQHTL 1519



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 41/155 (26%), Positives = 71/155 (45%), Gaps = 23/155 (14%)

Query: 11   ITLVVRAIQYDNQDRYALATLIVSKAGTSLREL---------------QFSKNEYSVSAL 55
            I  V +++ ++   +Y L+     K  +SL ++               +F ++ YS   L
Sbjct: 3270 ILYVNKSLDFETSPKYFLSVECSRKGSSSLSDMTTIVVNITDINEHRPRFPQHLYSTRVL 3329

Query: 56   ENLPVNYVLLTVTT---NKPRDLRVKYWL--SNDYGERFSISRQGDISLMQCLDYETEDS 110
            EN  V  V+LTV+    + P +  + Y L   N  G      ++G++ + + LD+E   S
Sbjct: 3330 ENAIVGDVVLTVSATDEDGPVNSAITYSLIGGNQLGHFAIHPKKGELQVAKALDWEQTSS 3389

Query: 111  YRFTVYATDT---LMTTSATVNISVVNVNDWDPRF 142
            Y   + ATD+    +     + I VV+VND  PRF
Sbjct: 3390 YSLKLRATDSGQPALYEDTDIAIQVVDVNDNPPRF 3424



 Score = 48.5 bits (114), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 57/198 (28%), Positives = 90/198 (45%), Gaps = 24/198 (12%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGER-----FSISRQ-GDI 97
            QFS+  Y+ SA E+LP    + +V     +D  +   +     E      FS+ +  G +
Sbjct: 2687 QFSEPLYTFSASEDLPEGSEIGSVKAVAGQDPVIYSLVQGTTPESNKDGIFSLDQNTGVL 2746

Query: 98   SLMQCLDYETEDSYRFTVYA----TDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
             + + +DYE+   Y+  + A     DT + +  +VNI V +VND  P F    Y+  L  
Sbjct: 2747 KVRKAMDYESTKWYQIDLMAHCPHNDTYLGSLVSVNIQVKDVNDNRPIFEADPYKAVL-- 2804

Query: 154  IPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPY------EKMFSINDSGHISIVDLSAL 207
                ++  G+ + +V A D D GD   +S R P        ++F+I DS    I  L  L
Sbjct: 2805 --TENMPVGTSVIQVTANDQDTGDDGQVSYRLPVGPGSNIHELFAI-DSETGWITTLQEL 2861

Query: 208  NTSTIQL---VVVATDTG 222
            +  T Q+    VVA D G
Sbjct: 2862 DCETNQIYHFYVVAYDHG 2879



 Score = 46.2 bits (108), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 71/229 (31%), Positives = 98/229 (42%), Gaps = 25/229 (10%)

Query: 13   LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENL--PVNYVLLTVTTN 70
            L+VRA     QD  AL  +  ++A  +   LQF ++ Y  +  ENL      V+L    N
Sbjct: 1935 LIVRASDGLYQDT-ALVKISWTQAPNTT--LQFDRDVYRATVKENLLERKALVILGAQGN 1991

Query: 71   KPRDLRVKYWLSNDYGERFSISRQGDISLMQC-LDYETEDSYRFTVYATDTLM---TTSA 126
               D  + Y+L N       I   G +       D E +D++   V   D         A
Sbjct: 1992 HLNDT-LSYFLLNGTDMFHMIKSAGVLQTRGVGFDREQQDTHEVAVELRDNRTPQRVAQA 2050

Query: 127  TVNISVVNVNDWDPRFRYPQYELFLPHIPLADLT-PGSVIGKVEAADGDKG--DRVTLSL 183
             V +SV +VND  P F++  Y     H  + D T PG V+ +V A D D G    VT + 
Sbjct: 2051 LVRVSVEDVNDNSPEFKHLPY-----HTIIQDGTEPGDVLFQVSATDQDLGVNGAVTYAF 2105

Query: 184  RGPYEKMFSINDS-GHISI---VDLSALNTSTIQLVVVATDTGNPPRQA 228
               Y   F I+   G IS+    D  ALN    +L V+A D G P  QA
Sbjct: 2106 AEDY-TYFRIDPYLGDISLRKPFDYQALN--KYRLKVIAQDGGTPSLQA 2151



 Score = 45.8 bits (107), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 55/192 (28%), Positives = 84/192 (43%), Gaps = 15/192 (7%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGERFSIS--RQGDISLMQC 102
            F    Y V   EN+ +   +L      P  LR+ Y +  +       +  + G +++   
Sbjct: 2167 FQTPYYKVRVPENITLYTPILHTQARSPEGLRLIYNIVEEEPLMLFTTDFKTGVLTVTGP 2226

Query: 103  LDYETEDSYRFTVYATDTLMT--TSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLT 160
            LDYE++  + FTV ATDT +   + ATV + V +VND  P F    Y   +    L   T
Sbjct: 2227 LDYESKTKHVFTVRATDTALGSFSEATVEVLVEDVNDNPPTFSQLVYTTSISE-GLPAQT 2285

Query: 161  PGSVIGKVEAADGDKGDRVTLSLR-----GPYEKMFSINDS-GHISIV-DLSALNTSTIQ 213
            P   + ++ A+D D G    +S +         K F IN S G +S V +L         
Sbjct: 2286 P---VIQLLASDQDSGQNRDVSYQIVEDGSDVSKFFQINGSTGEMSTVQELDYEAQQHFH 2342

Query: 214  LVVVATDTGNPP 225
            + V A D G+PP
Sbjct: 2343 VKVRAMDRGDPP 2354



 Score = 43.9 bits (102), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 57/201 (28%), Positives = 82/201 (40%), Gaps = 20/201 (9%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTT------NKPRDLRVKYWLSNDYGERFSISRQGD- 96
            +F+  +Y  S +EN      + T+ T       + R +   Y    D   +F IS+ GD 
Sbjct: 2903 RFASEDYRGSVVENSEPGEPVATLKTLDADIAEQNRQVTC-YITEGDPLGQFGISQVGDE 2961

Query: 97   --ISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHI 154
              I   + LD E    Y   + A+D     S  V I V+++ND  P+      +L     
Sbjct: 2962 WRIFSRKTLDREHTAKYLLRITASDGKFQASVPVEIFVLDINDNSPQCS----QLLYTGK 3017

Query: 155  PLADLTPGSVIGKVEAA--DGDKGDRVTLSLRGPYEKMFSINDSGHISIVDLSALNTS-- 210
               D+ P   I KV A   D D   ++T SL GP    F + D     +  L+AL+    
Sbjct: 3018 VSEDVPPEHFILKVSATDLDSDTNAQITYSLHGPGADEFKL-DPHTGDLTTLTALDREKK 3076

Query: 211  -TIQLVVVATDTGNPPRQASV 230
                LV  ATD G    QA V
Sbjct: 3077 DVYSLVAKATDGGGQSCQADV 3097



 Score = 43.1 bits (100), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 41/133 (30%), Positives = 70/133 (52%), Gaps = 14/133 (10%)

Query: 95   GDISLMQCLDYETEDSYRFTVYATDT-----LMTTSATVNISVVNVNDWDPRFRYPQYEL 149
            G ++ +  +DYE+  S+RF +Y  D           A V I+V NVND  PRF    YE+
Sbjct: 1816 GTLTTVLEMDYESMPSFRFDIYVHDQGSPILFAPRVAQVIINVRNVNDCPPRFLDQIYEV 1875

Query: 150  FLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSIND-SGHISIVDLSAL 207
             +    +  +  G  +  V+A+D D    VT S++ G  ++  +++  +G IS++D + L
Sbjct: 1876 AI----MKPIHRGMELLMVQASDDDS--EVTYSIKTGNADEAIAMHPITGLISVLDPTLL 1929

Query: 208  NTSTIQLVVVATD 220
              S  +L+V A+D
Sbjct: 1930 GLSR-ELIVRASD 1941



 Score = 42.7 bits (99), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 56/215 (26%), Positives = 99/215 (46%), Gaps = 19/215 (8%)

Query: 26   YALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDL----RVKYWL 81
            +++  LI++    +    Q     + +   E+LP   +L  +  + P DL     V+Y L
Sbjct: 902  FSVTDLIITLEDVNDNSPQCITEHHRLKVPEDLPPATILTFLDASDP-DLGPAGEVQYVL 960

Query: 82   SNDYGERFSIS-RQGDISLMQCLDYETEDSYRFTVYATDT----LMTTSATVNISVVNVN 136
             +D    F ++   G +SL + LD+E    Y  +++A+D+       T   V ++V++VN
Sbjct: 961  LDDAHGTFHVNPMTGALSLEKELDFERRAGYNLSLWASDSGKPLARRTLCHVEVTVLDVN 1020

Query: 137  DWDPRFRYPQYELFLPHIPLADLTP-GSVIGKVEAADGDKG--DRVTLSLRGPYE-KMFS 192
            +       P++  F+    + + +P G+ +  V A D D G    +   LRG      FS
Sbjct: 1021 E---NLHPPRFASFVHQGQVQENSPSGTSVMVVAAHDDDTGLDGELQYFLRGGTGLAAFS 1077

Query: 193  IN-DSGHI-SIVDLSALNTSTIQLVVVATDTGNPP 225
            IN D+G I ++  L     S   L V+A D G+ P
Sbjct: 1078 INQDTGMIQTLAPLDREFASCYWLTVLAVDRGSIP 1112



 Score = 42.4 bits (98), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 47/145 (32%), Positives = 70/145 (48%), Gaps = 15/145 (10%)

Query: 95   GDISLMQCLDYETEDSYRFTVYATD----TLMTTSATVNISVVNVNDWDPRFRYPQYELF 150
            G ++  + LD E +D +   V   D    +L +TS  V + + +VND  P F +  + + 
Sbjct: 1188 GLLATARQLDRENKDEHILEVTVLDNGEPSLRSTSRVV-VRIADVNDNPPVFSHKLFNVR 1246

Query: 151  LPHIPLADLTPGSV--IGKVEAADGDKG--DRVTLSLRGPYEKMFSIND-SGHISIVDLS 205
            LP      L PG+   + ++ A+D D+G   RVT S+    E  FSI+  +G +S     
Sbjct: 1247 LPE----RLNPGTSGPVYRLVASDLDEGLNGRVTYSIEESDEAGFSIDPVTGVVSASSTF 1302

Query: 206  ALNTSTIQLVVVATDTGNPPRQASV 230
                  I L V ATD G PP  ASV
Sbjct: 1303 TAGEYNI-LTVKATDGGQPPLLASV 1326



 Score = 41.6 bits (96), Expect = 0.65,   Method: Compositional matrix adjust.
 Identities = 58/209 (27%), Positives = 97/209 (46%), Gaps = 17/209 (8%)

Query: 28   LATLIVSKAGTSLRELQFSKNEYSVSALENLPVN-YVLLTVTTNKPRDLRVKYWL--SND 84
            L T+ VS  G       F   E+SV   E+      VL   T  +P   +  Y +   N+
Sbjct: 3199 LGTVTVSVVGLEDYLPVFLSTEHSVQVPEDAQRGTEVLRLATLTRPGAEKTGYRVVSGNE 3258

Query: 85   YGERFSI-SRQGDISLMQCLDYETEDSYRFTVYAT---DTLMTTSATVNISVVNVNDWDP 140
             G RF + +R G + + + LD+ET   Y  +V  +    + ++   T+ +++ ++N+  P
Sbjct: 3259 QG-RFRLDARTGILYVNKSLDFETSPKYFLSVECSRKGSSSLSDMTTIVVNITDINEHRP 3317

Query: 141  RFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDK--GDRVTLSLRGPYE-KMFSIN-DS 196
            RF  PQ+ L+   + L +   G V+  V A D D      +T SL G  +   F+I+   
Sbjct: 3318 RF--PQH-LYSTRV-LENAIVGDVVLTVSATDEDGPVNSAITYSLIGGNQLGHFAIHPKK 3373

Query: 197  GHISIVD-LSALNTSTIQLVVVATDTGNP 224
            G + +   L    TS+  L + ATD+G P
Sbjct: 3374 GELQVAKALDWEQTSSYSLKLRATDSGQP 3402



 Score = 38.5 bits (88), Expect = 6.0,   Method: Compositional matrix adjust.
 Identities = 35/132 (26%), Positives = 60/132 (45%), Gaps = 1/132 (0%)

Query: 12   TLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNK 71
            TL V+A    +   + LAT+I+    +      FS +EY V   E++PV   +L ++   
Sbjct: 1623 TLTVKAEDQGSPQGHDLATVIIHVYPSDSSAPIFSSSEYFVEIPESIPVGSPILLISATS 1682

Query: 72   PRDLRVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDTLMT-TSATVNI 130
              ++  +    N  G     S  G IS  + LD+E   SY+  +  ++   T T   V +
Sbjct: 1683 FSEVTYELREGNKNGVFSMNSYSGLISTQKKLDHEKISSYQLKIRGSNMAGTFTDVMVLV 1742

Query: 131  SVVNVNDWDPRF 142
             +++ ND  P F
Sbjct: 1743 YIIDENDNAPVF 1754



 Score = 37.7 bits (86), Expect = 9.9,   Method: Compositional matrix adjust.
 Identities = 37/114 (32%), Positives = 53/114 (46%), Gaps = 11/114 (9%)

Query: 128  VNISVVNVNDWDPRFRYPQYELFLPHIPLADLT-PGSVIGKVEAADGDKGDRVTLS---L 183
            V+I V + N   PRF    YE       ++D T PG+ + +V A DGD+G    +    L
Sbjct: 1537 VSIHVEDGNLHPPRFTQLHYE-----TRVSDTTVPGAELLQVRAMDGDRGANAEVHYSFL 1591

Query: 184  RGPYEKMFSIND-SGHISIVD-LSALNTSTIQLVVVATDTGNPPRQASVPAIMH 235
            +G  E  F+IN   G I++   L   N +   L V A D G+P        I+H
Sbjct: 1592 KGNSEGFFNINALLGIITLAQKLDQANHARYTLTVKAEDQGSPQGHDLATVIIH 1645


>gi|348563333|ref|XP_003467462.1| PREDICTED: protocadherin-7-like isoform 4 [Cavia porcellus]
          Length = 1248

 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 62/203 (30%), Positives = 92/203 (45%), Gaps = 21/203 (10%)

Query: 37  GTSLRELQFSKNEYSVSALENLPVNYV--LLTVTTNKPRDLRVKYWLSNDYGERFSIS-R 93
           G S+ E+ F +N        N+P   V  +L    +  ++  + Y L +     F+I   
Sbjct: 537 GQSVVEVYFPEN--------NIPGERVATVLATDADSGKNAEIAYSLDSAVMGIFAIDPD 588

Query: 94  QGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELF 150
            GDI +   LD E  D Y F V A D    ++  S TV + V + ND DP+F    +  +
Sbjct: 589 SGDILVNTVLDREQTDRYEFKVNAKDKGIPVLQGSTTVIVQVADKNDNDPKFMQDIFTFY 648

Query: 151 LPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSI-NDSGHI-SIVDLSAL 207
           +      +L P S +G V   D DKG    +SL       +FSI ND+G I S +     
Sbjct: 649 VKE----NLQPNSPVGMVTVMDADKGRNAEMSLYIEENSNIFSIENDTGTIYSTMSFDRE 704

Query: 208 NTSTIQLVVVATDTGNPPRQASV 230
           + +T    V A D G+PPR A+ 
Sbjct: 705 HQTTYTFRVKAVDGGDPPRSATA 727



 Score = 45.8 bits (107), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 79/318 (24%), Positives = 137/318 (43%), Gaps = 50/318 (15%)

Query: 30  TLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVT---TNKPRDLRVKYWLSNDYG 86
           T+IV  A  +  + +F ++ ++    ENL  N  +  VT    +K R+  +  ++  +  
Sbjct: 625 TVIVQVADKNDNDPKFMQDIFTFYVKENLQPNSPVGMVTVMDADKGRNAEMSLYIEEN-S 683

Query: 87  ERFSISRQ-GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRF 142
             FSI    G I      D E + +Y F V A D      + +ATV++ V++ ND  P  
Sbjct: 684 NIFSIENDTGTIYSTMSFDREHQTTYTFRVKAVDGGDPPRSATATVSLFVMDENDNAPTV 743

Query: 143 RYPQ---YELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIND- 195
             P+   Y L  P   +      +V+  V A D D G    L+   + G   K+F I+  
Sbjct: 744 TLPRNISYTLLPPSSNVR-----TVVATVLATDSDDGINADLNYSIVGGNPFKLFEIDST 798

Query: 196 SGHISIV-DLSALNTSTIQLVVVATDTGNPPRQASVPAIMHF--------PEAIVQQASS 246
           SG +S+V  L+  +    +LVV   D+G P +  S  A++H            I  Q + 
Sbjct: 799 SGVVSLVGKLTHKHYGLHRLVVQVNDSGQPSQ--STTALVHVFVNESVSNATVIDSQIAR 856

Query: 247 KLNSGTSSTVL-------------IILGVVLIVLGFVIILLILYIHKNKHTKN-NGPPGS 292
            L++  +  +              I++GVV  ++  ++I+LI+ + +   +KN NG    
Sbjct: 857 SLHTPLTQDIAGDPSYEISKQRLSIVIGVVAGIMTVILIILIVVMARYCRSKNKNGYEAG 916

Query: 293 SHSKNDSFLSNVILPEKH 310
                D F      P++H
Sbjct: 917 KKDHEDFF-----TPQQH 929



 Score = 43.1 bits (100), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 41/150 (27%), Positives = 69/150 (46%), Gaps = 26/150 (17%)

Query: 93  RQGDISLMQCLDYETEDSYRFTVY---ATDTLMTTSATVNISVVNVNDWDPRFRYPQYEL 149
           +Q  + +   LD E  DSY  T+      D   ++ A + + + +VND  PRF    YE 
Sbjct: 257 KQPQLIVKGALDREQRDSYELTLRVRDGGDPPRSSQAILRVLITDVNDNSPRFEKSVYEA 316

Query: 150 FLPHIPLADLTPGSVIGKVEAADGDKG---------DRVTLSLRGPYEKMFSIND-SGHI 199
            L      +  PG+ I ++ AAD D G            T S+R    ++  +++ SG +
Sbjct: 317 DLAE----NSAPGTPILQLRAADLDVGVNGQIEYVFGAATESVR----RLLRLDETSGWL 368

Query: 200 SI---VDLSALNTSTIQLVVVATDTGNPPR 226
           S+   +D   +N   ++  V+A D G PP+
Sbjct: 369 SVLHRIDREEVN--QLRFTVMARDRGQPPK 396


>gi|312385778|gb|EFR30197.1| hypothetical protein AND_00373 [Anopheles darlingi]
          Length = 1232

 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 62/197 (31%), Positives = 93/197 (47%), Gaps = 12/197 (6%)

Query: 37  GTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLS--NDYGERFSISRQ 94
           G + +  +F+K  Y V   E   +N  +L +    P +  V Y ++  ND   +FSI + 
Sbjct: 392 GPNTKPPRFAKPVYEVQVSEGAEINSTVLVLKAEDPENDPVSYAITTGNDL-RQFSIGKD 450

Query: 95  -GDISLMQCLDYETEDSYRFTVYATDTL-MTTSATVNISVVNVNDWDPRFRYPQYELFLP 152
            G IS+++ LD E    Y+  V A D   + +SATVNI V ++ND +P F     E  LP
Sbjct: 451 SGVISVIRKLDREDLTRYQLIVRAEDNGGLASSATVNIRVTDINDKNPEFD----ERKLP 506

Query: 153 HIPLADL-TPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSIND-SGHI-SIVDLSALNT 209
           ++   D    G  IG V A D D+G    +S   P +  F I+  +G I + + L     
Sbjct: 507 YVFAVDEGQEGVAIGTVHATDADEGMNAEISYTIPSDIPFRIDSRTGEIRTKLALDYEKQ 566

Query: 210 STIQLVVVATDTGNPPR 226
              + VV A D    PR
Sbjct: 567 KEYKFVVTAKDGAPEPR 583



 Score = 45.4 bits (106), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 36/130 (27%), Positives = 59/130 (45%), Gaps = 10/130 (7%)

Query: 77  VKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDTL---MTTSATVNISVV 133
           + Y + +D   R   SR G+I     LDYE +  Y+F V A D        +A+V + V 
Sbjct: 536 ISYTIPSDIPFRID-SRTGEIRTKLALDYEKQKEYKFVVTAKDGAPEPRLGTASVTVKVR 594

Query: 134 NVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSI 193
           ++ D  PRF     E+ +P     +  P + +  V A D D    +T +LR     +F +
Sbjct: 595 DIPDEVPRFMESTVEVRIP-----ENIPDTAVTTVRAFDPDTKPEITYTLRRGPGDLFKV 649

Query: 194 N-DSGHISIV 202
           +  +G I  +
Sbjct: 650 DARTGQIKTI 659



 Score = 37.7 bits (86), Expect = 9.6,   Method: Compositional matrix adjust.
 Identities = 47/193 (24%), Positives = 78/193 (40%), Gaps = 17/193 (8%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGERFSI-SRQGDISLMQC 102
           +F ++   V   EN+P   V      +      + Y L    G+ F + +R G I  ++ 
Sbjct: 602 RFMESTVEVRIPENIPDTAVTTVRAFDPDTKPEITYTLRRGPGDLFKVDARTGQIKTIRG 661

Query: 103 LDYETEDSYRFTVYATDTLMTTSA---TVNISVVNVNDWDPRF-RYPQYELFLPHIPLAD 158
           LDYE +  +   +   +           + + V + ND  P F   P+      ++P+  
Sbjct: 662 LDYEKDKMHELIIGTLENDGNGPGDFIKILVEVEDRNDIPPVFVSIPEPVNINDNLPI-- 719

Query: 159 LTPGSVIGKVEAADGDKGD-----RVTLSLRGPYEKMFSIN-DSGHISIV-DLSALNTST 211
              G+++G + A DGD        R  L  RG   K F ++ DSG + I  DL     + 
Sbjct: 720 ---GAIVGSMPAVDGDGSSPGNVVRYELVGRGKALKYFQVDADSGMVRIRDDLGKEEDNE 776

Query: 212 IQLVVVATDTGNP 224
             + V A D G P
Sbjct: 777 YLIDVRAYDMGEP 789


>gi|297301192|ref|XP_002805748.1| PREDICTED: cadherin-23-like [Macaca mulatta]
          Length = 3485

 Score = 65.5 bits (158), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 60/195 (30%), Positives = 91/195 (46%), Gaps = 20/195 (10%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWLSNDYGERFSIS-RQGDISLM 100
            F +  Y  +  E++PV  V+LTVT           ++Y L +  G +F+I+   GDI ++
Sbjct: 2533 FDQPSYQEAVFEDVPVGTVILTVTATDADSGNFALIEYSLGDGEG-KFAINPTTGDIYVL 2591

Query: 101  QCLDYETEDSYRFTVYATDT-------LMTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
              LD E +D Y  T  A D            S  V I V++VND  P+F  PQ+   +  
Sbjct: 2592 SSLDREKKDHYILTALAKDNPGDVASNRRENSVQVVIQVLDVNDCRPQFSKPQFSTSV-- 2649

Query: 154  IPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIN-DSGHISIVDLSALNTS 210
                +   G+ +  + A D D+G    +T SL GP  + F ++ DSG ++       +  
Sbjct: 2650 --YENEPAGTSVITMMATDQDEGPNGELTYSLEGPGVEAFHVDMDSGLVT-TQRPLQSYE 2706

Query: 211  TIQLVVVATDTGNPP 225
               L VVATD G PP
Sbjct: 2707 RFNLTVVATDGGEPP 2721



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 68/218 (31%), Positives = 102/218 (46%), Gaps = 44/218 (20%)

Query: 45   FSKNEYSVSALENLPVNY-VLLTVTTNKPRDLRVKYWLSNDYGE-----------RFSI- 91
            FSK  Y VS +EN+     VL    T+  R        S +YG+           +F I 
Sbjct: 802  FSKPAYFVSVVENIMAGATVLFLNATDLDR--------SREYGQESIIYSLEGSAQFRIN 853

Query: 92   SRQGDISLMQCLDYETEDSYRFTVYATD-----TLMTTSATVNISVVNVNDWDPRFRYPQ 146
            +R G+I+    LD ET+  Y   V A D        T  ATVNI+++++ND  P ++   
Sbjct: 854  ARSGEITTTSLLDRETKSEYILIVRAVDGGVGHNQKTGIATVNITLLDINDNHPTWKDAP 913

Query: 147  YELFLPHIPLADLT-PGSVIGKVEAADGDKGDRVTL--SLRGPYEKMFSIND-SGHI--- 199
            Y     +I L ++T P S +  V A D D G+  TL  S++ P  K +S+N  +G I   
Sbjct: 914  Y-----YINLVEMTPPDSDVTTVVAVDPDLGENGTLVYSIQPP-NKFYSLNGTTGKIRTT 967

Query: 200  -SIVDLSALNTSTIQL----VVVATDTGNPPRQASVPA 232
             +++D    +    +L    VV  TD G PP +A+  A
Sbjct: 968  HAMLDRENPDPHEAELMRKIVVSVTDCGRPPLRATSSA 1005



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 61/205 (29%), Positives = 92/205 (44%), Gaps = 27/205 (13%)

Query: 43   LQFSKNEYSVSALENLPVNYVLLTVTTNKPRDL-----RVKYWLSNDYGERFSISR-QGD 96
            +QFS   Y V+ LENL +   ++ V      +L     R   + S      F I    G 
Sbjct: 1442 VQFSNASYEVAILENLALGTEIVRVQAYSIDNLNQIMYRFDAYTSTQAKALFKIDAITGV 1501

Query: 97   ISLMQCLDYETEDSYRFTVYATDTLMTTSATVN--ISVVNVNDWDPRFRY-PQYELFLPH 153
            I++   +D E  D Y  TV A D      +TV   I+V++ ND  PRF +     + +P 
Sbjct: 1502 ITVQGLVDREKGDFYTLTVVADDGGPKVDSTVKVYITVLDENDNRPRFDFISDSSIIIPE 1561

Query: 154  IPLADLTPGSVIGKVEAADGDKGD--RVTLSL-----RGPYEKMFSINDS-GHISI---V 202
                D   G  +  V+A D D G   +V  SL      G +E + + NDS G + +   +
Sbjct: 1562 ----DCPVGQRVATVKARDPDAGSNGQVVFSLASGNIAGAFE-IVTTNDSIGEVFVARPL 1616

Query: 203  DLSALNTSTIQLVVVATDTGNPPRQ 227
            D   L+   ++  VVA+D G PPR+
Sbjct: 1617 DREELDHYILK--VVASDRGTPPRK 1639



 Score = 44.7 bits (104), Expect = 0.074,   Method: Compositional matrix adjust.
 Identities = 62/235 (26%), Positives = 106/235 (45%), Gaps = 45/235 (19%)

Query: 65   LTVTTNKPRDLRVKYWLS---NDYG---------------ERFSIS-RQGDISLMQCLDY 105
            ++V+ + PR+ RV  WL+   ND G                +FS+  R   +  +  LD 
Sbjct: 1133 VSVSEDVPREFRV-VWLNCTDNDVGLNAELSYFITGGNVDGKFSVGYRDAVVRTVVSLDR 1191

Query: 106  ETEDSYRFTVYATDT-----LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLT 160
            ET  +Y   + A D        T +ATV ++V++VND  P F    YE  +P     D+ 
Sbjct: 1192 ETTAAYMLILEAIDNGPVGKRHTGTATVFVTVLDVNDNRPIFLQSSYEASVPE----DIP 1247

Query: 161  PGSVIGKVEAADGDKGD--RVTLS-LRGPYEKMFSINDSGHISIVDLSALN---TSTIQL 214
             G  I +++A D D+G+  RV    L G +   F I+ S  + +     L+    S+  L
Sbjct: 1248 EGHSIVQLKATDADEGEFGRVWYRILHGNHGNNFRIHVSNGLLMRGPRPLDRERNSSHVL 1307

Query: 215  VVVATDTGNPPRQASVPAIMHFPE------AIVQQASSKLN----SGTSSTVLII 259
            +V A +    P ++SV  I++  +         QQ  S+L     +G  ++V+++
Sbjct: 1308 IVEAYNHDLGPMRSSVRVIVYVEDVNDEAPVFTQQQYSRLGLRETAGIGTSVIVV 1362



 Score = 44.7 bits (104), Expect = 0.086,   Method: Compositional matrix adjust.
 Identities = 63/262 (24%), Positives = 100/262 (38%), Gaps = 74/262 (28%)

Query: 44  QFSKNEYSVSALENLPVNYVL--LTVTTNKPRDLRV----KYWLSNDYGERF-----SIS 92
           +F+ +EYSV+  E   V + L       +K  +L +    + +L  +    F     S+ 
Sbjct: 534 EFNSSEYSVAITELAQVGFALPLFIQVVDKDENLGLNSMFEVYLVGNNSHHFIISPTSVQ 593

Query: 93  RQGDISLMQC--LDYETEDSYRFTVYATDTL--MTTSATVNISVVNVNDWDPRFRYPQYE 148
            + DI +     LDYET D Y F ++A +++      A V I+++N ND  P F  P Y 
Sbjct: 594 GKADIRIRVAIPLDYETVDRYDFDLFANESVPDHVGYAKVKITLINENDNRPIFSQPLYN 653

Query: 149 LFLPHIPLADLTPGSVIGKVEAADGDKG-------------DR----------------- 178
           + L      ++T G+ +  V A D D G             DR                 
Sbjct: 654 ISL----YENVTVGTSVLTVLATDNDAGTFGEVNYFFSDDPDRDGTQNLHLELVFEAGRD 709

Query: 179 ----------------------VTLSLRGPYEKMFSINDSGHISI---VDLSALNTSTIQ 213
                                 V+ S  G Y  +      G IS+   +D   ++   I 
Sbjct: 710 EGKAGRATDEDSPPNNQITYSIVSASAFGSYFDISLYEGYGVISVSRPLDYEQISNGLIY 769

Query: 214 LVVVATDTGNPPRQASVPAIMH 235
           L V+A D GNPP  ++VP  + 
Sbjct: 770 LTVMAKDAGNPPLNSTVPVTIE 791



 Score = 40.0 bits (92), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 67/284 (23%), Positives = 115/284 (40%), Gaps = 64/284 (22%)

Query: 7    FLQPITLVVRA----IQYDNQDRYALATLIVSK-----AGTSL-----RELQFSKNEY-- 50
            F+ P+T V+R     I  + Q+ Y L  +   +     +GT++      ++  S  E+  
Sbjct: 2248 FIHPVTGVIRVGNATIDREEQESYRLTVVATDRGTVPLSGTAIITILIEDINDSCPEFLN 2307

Query: 51   ---SVSALENLPVNYVLLTVTTNKPRDLRVKY--------------WLSNDYGERFSIS- 92
               +VS LE+     V+  VT    RDL  K                L  D  + F+++ 
Sbjct: 2308 PIQTVSVLESAEPGTVIANVTAID-RDLNPKLEYHIVGIVAKDDTDLLVPDQEDVFAVNI 2366

Query: 93   RQGDISLMQCLDYETEDSYRFTVYATD--------TLMTTSATVNISVVNVNDWDPRFRY 144
              G + +   L+ E   +Y  T+   D        ++   +A + ++V++VND  P+F+ 
Sbjct: 2367 NTGSVMVKSPLNRELVATYEVTLSVIDNASDLPERSVSVPNAKLTVNVLDVNDNTPQFKP 2426

Query: 145  PQYELFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDSGHISIV 202
                 +   I L   TPG+ +  V A D DKG    VT +L         +   G++ + 
Sbjct: 2427 FGITYYTERI-LEGATPGTTLIAVAAVDPDKGLNGLVTYTL-------LDLVPPGYVQLE 2478

Query: 203  DLSA-----------LNTSTIQLVVVATDTGNPPRQASVPAIMH 235
            D SA                +   V A+D G+PPR A +P  + 
Sbjct: 2479 DSSAGKVIANRTVDYEEVHWLNFTVRASDNGSPPRAAEIPVYLE 2522



 Score = 40.0 bits (92), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 33/107 (30%), Positives = 49/107 (45%), Gaps = 8/107 (7%)

Query: 92   SRQGDISLMQCLDYETEDSYRFTVYATDTLMTTSAT---VNISVVNVNDWDPRFRYPQYE 148
            S  G +   + +DYE      FTV A+D      A    V + +V++ND +P F  P Y+
Sbjct: 2480 SSAGKVIANRTVDYEEVHWLNFTVRASDNGSPPRAAEIPVYLEIVDINDNNPIFDQPSYQ 2539

Query: 149  LFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSIN 194
              +      D+  G+VI  V A D D G+   +    G  E  F+IN
Sbjct: 2540 EAV----FEDVPVGTVILTVTATDADSGNFALIEYSLGDGEGKFAIN 2582



 Score = 39.7 bits (91), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 44/142 (30%), Positives = 67/142 (47%), Gaps = 16/142 (11%)

Query: 105  YETEDSYRFTVYATDT-----LMTTSATVNISVVNVNDWDPRFR-YPQYELFLPHIPLAD 158
            +E E   +  V  TD        T+SATV ++++++ND DP F+  P     L  IP   
Sbjct: 979  HEAELMRKIVVSVTDCGRPPLRATSSATVFVNLLDLNDNDPTFQNLPFVAEVLEGIPA-- 1036

Query: 159  LTPGSVIGKVEAADGDKGDRVTLSLRGP--YEKM-FSINDSGHISI--VDLSALNTSTIQ 213
               G  I +V A D D+G    +S R P    +M F IN S  + +   +L     +  Q
Sbjct: 1037 ---GVSIYQVVAIDLDEGLNGLVSYRMPVGMPRMDFLINSSSGVVVTTTELDRERIAEYQ 1093

Query: 214  LVVVATDTGNPPRQASVPAIMH 235
            L VVA+D G P + ++    +H
Sbjct: 1094 LRVVASDAGTPTKSSTSTLTIH 1115


>gi|347543913|gb|AEP02529.1| CDH23, partial [Taphozous melanopogon]
          Length = 3205

 Score = 65.5 bits (158), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 61/195 (31%), Positives = 91/195 (46%), Gaps = 20/195 (10%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWLSNDYGERFSIS-RQGDISLM 100
            F +  Y  +  E++PV  V+L VT           ++Y L +  G +F+I+   GDI ++
Sbjct: 2392 FDQPSYQEAISEDVPVGTVILRVTATDADSGNFALIEYSLGDGEG-KFAINPTTGDIYVL 2450

Query: 101  QCLDYETEDSYRFTVYATD-------TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
              LD E +D Y  T  A D            S  V I V++VND  P+F  PQ+   +  
Sbjct: 2451 SSLDREKKDHYILTALAKDNPGDVASNRRENSVQVVIQVLDVNDCRPQFSKPQFSTSV-- 2508

Query: 154  IPLADLTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSIN-DSGHISIVDLSALNTS 210
                +   G+ +  + A D D+G    VT SL GP E+ F ++ DSG ++       +  
Sbjct: 2509 --YENEPAGTSVITMVATDQDEGSNGEVTYSLEGPGEEAFHVDMDSGLVT-TKRPLHSYE 2565

Query: 211  TIQLVVVATDTGNPP 225
               L VVATD G PP
Sbjct: 2566 RFNLTVVATDCGEPP 2580



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 65/210 (30%), Positives = 98/210 (46%), Gaps = 28/210 (13%)

Query: 45  FSKNEYSVSALENLPVNYVLLTV--TTNKPRDL-RVKYWLSNDYGERFSISRQ-GDISLM 100
           FS+  Y+VS  EN+ V   +LTV  T N       V Y+ S+D  +RFS+ +  G I L+
Sbjct: 450 FSQPLYNVSLYENVTVGTSVLTVLATDNDVGTFGEVNYFFSDD-PDRFSLDKDIGLIMLI 508

Query: 101 QCLDYETEDSYRFTVYATDTL-MTTSATVNISVVNVNDWDPRFRYPQYELFL----PHIP 155
             LDYE    +  TV A D     T+  V I+V++VND  P F+   Y   L    P + 
Sbjct: 509 AKLDYELIQRFTLTVIARDGGGEETTGRVRINVLDVNDNVPTFQKDAYVGALRENEPSV- 567

Query: 156 LADLTPGSVIGKVEAADGDK--GDRVTLSL-----RGPYEKMFSINDSGHISI---VDLS 205
                  + + ++ A D D    +++T S+      G Y  +      G IS+   +D  
Sbjct: 568 -------TQLVRLRATDEDSPPNNQITYSIVNASAFGSYFDISVYEGYGVISVSRPLDYE 620

Query: 206 ALNTSTIQLVVVATDTGNPPRQASVPAIMH 235
            +    I L V+A D GNPP  ++VP  + 
Sbjct: 621 QIPNGMIYLTVMAKDAGNPPLNSTVPVTIE 650



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 67/217 (30%), Positives = 98/217 (45%), Gaps = 42/217 (19%)

Query: 45  FSKNEYSVSALENLPVNY-VLLTVTTNKPRDLRVKYWLSNDYGE-----------RFSI- 91
           FSK  Y VS +EN+     VL    T+  R        S +YG+           +F I 
Sbjct: 661 FSKPAYFVSVVENIMAGATVLFLNATDLDR--------SREYGQESIIYSLEGSSQFRIN 712

Query: 92  SRQGDISLMQCLDYETEDSYRFTVYATD-----TLMTTSATVNISVVNVNDWDPRFRYPQ 146
           +R G+I+    LD E +  Y   V A D        T  ATVNI+++++ND  P ++   
Sbjct: 713 ARSGEITTTSLLDREAKSEYILIVRAVDGGVGHNQKTGIATVNITLLDINDNHPTWKDAP 772

Query: 147 YELFLPHIPLADLT-PGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSINDS-GHISI-- 201
           Y     +I L ++T P S +  V A D D G+  TL     P  K +S+N S G I    
Sbjct: 773 Y-----YINLVEMTPPDSDVTTVVAVDPDLGENGTLVYSIEPPNKFYSLNSSTGKIRTTH 827

Query: 202 VDLSALNTSTIQ------LVVVATDTGNPPRQASVPA 232
           V L   N + I+      +++  TD G PP +A+  A
Sbjct: 828 VMLDRENPNPIEAELMRKIIISVTDCGRPPLRATSSA 864



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 47/141 (33%), Positives = 66/141 (46%), Gaps = 15/141 (10%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDY---GERFSI-SRQGDISLM 100
           F    YSV   EN PV   +  V    P DL     +   +    + F+I S +G I+++
Sbjct: 124 FHNQPYSVRIPENTPVGTPIFIVNATDP-DLGAGGSVLYSFQPPSQFFAIDSARGIITVI 182

Query: 101 QCLDYETEDSYRFTVYATDT----LMTTSATVNISVVNVNDWDPRF-RYPQYELFLPHIP 155
           Q LDYET  +Y+ TV ATD      ++T A + I + +V D DP F   P       H P
Sbjct: 183 QELDYETTQAYQLTVNATDQDKTRPLSTLANLAIIITDVQDMDPIFINLPYSTNIYEHSP 242

Query: 156 LADLTPGSVIGKVEAADGDKG 176
                PG+ +  + A D DKG
Sbjct: 243 -----PGTTVRVITAIDQDKG 258



 Score = 46.6 bits (109), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 64/235 (27%), Positives = 106/235 (45%), Gaps = 45/235 (19%)

Query: 65   LTVTTNKPRDLRVKYWLS---NDYG---------------ERFSIS-RQGDISLMQCLDY 105
            ++V+ + PRD RV  WL+   ND G                +FSI  R   +  +  LD 
Sbjct: 992  VSVSEDVPRDFRV-VWLNCTDNDVGLNAELSYFITGGNVDGKFSIGYRDAVVRTVVGLDR 1050

Query: 106  ETEDSYRFTVYATDT-----LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLT 160
            ET  +Y   + A D        T +ATV ++V++VND  P F    YE  +P     D+ 
Sbjct: 1051 ETTAAYTLVLEAIDNGPVGKRRTGTATVFVTVLDVNDNRPIFMQSSYEASVPE----DIP 1106

Query: 161  PGSVIGKVEAADGDKGD--RVTLS-LRGPYEKMFSINDSGHISIVDLSALNT---STIQL 214
             G  I +++A D D+G+  RV    L G +   F I+ S  + +     L+    S+  L
Sbjct: 1107 EGHSIVQLKATDADEGEFGRVWYRILHGNHGNNFRIHISDGLLMRGPKPLDREQDSSHVL 1166

Query: 215  VVVATDTGNPPRQASVPAIMHFPE------AIVQQASSKL----NSGTSSTVLII 259
            +V A +    P ++SV  I++  +         QQ  S+L     +G  ++V+++
Sbjct: 1167 IVEAYNHDLGPMRSSVRVIVYVEDVNDEAPVFTQQQYSRLALRETAGIGTSVIVV 1221



 Score = 46.2 bits (108), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 59/203 (29%), Positives = 90/203 (44%), Gaps = 23/203 (11%)

Query: 43   LQFSKNEYSVSALENLPVNYVLLTVTTNKPRDL-----RVKYWLSNDYGERFSI-SRQGD 96
            +QFS   Y  + +ENL +   ++ V      ++     R   + S      F I +  G 
Sbjct: 1301 VQFSNTSYEAAIMENLALGTEIVRVQAYSIDNINQITYRFDAYTSTQAKALFKIDATTGV 1360

Query: 97   ISLMQCLDYETEDSYRFTVYATDTLMTTSATVN--ISVVNVNDWDPRFRYPQYELFLPHI 154
            I++   +D E  D Y  TV A D      +TV   I+V++ ND  PRF +         +
Sbjct: 1361 ITVKGLVDREKGDFYTLTVVADDGGPKVDSTVKVYITVLDENDNSPRFDFTSDSAV--SV 1418

Query: 155  PLADLTPGSVIGKVEAADGDKGD--RVTLSL-RGPYEKMFSI---NDS-GHISI---VDL 204
            P  D   G  +  V+A D D G   +V  SL  G    +F I   NDS G + +   +D 
Sbjct: 1419 P-EDCPVGQRVATVKARDPDAGSNGQVVFSLASGNIAGVFEIVTTNDSIGEVFVARPLDR 1477

Query: 205  SALNTSTIQLVVVATDTGNPPRQ 227
              L+   ++  VVA+D G PPR+
Sbjct: 1478 EELDHYILK--VVASDRGTPPRK 1498



 Score = 43.1 bits (100), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 41/146 (28%), Positives = 68/146 (46%), Gaps = 17/146 (11%)

Query: 44  QFSKNEYSVSALENLPVNYVL----LTVTTNKPRDLRVKYWLSNDYGERF-----SISRQ 94
           +F+ +EYSV+  E   V + L      V  ++  +   + +L  +    F     S+  +
Sbjct: 339 EFNSSEYSVAITELAQVGFALPLFIQVVDKDEGLNSMFEVYLVGNNSHHFIISPTSVQGK 398

Query: 95  GDISLMQC--LDYETEDSYRFTVYATDTL--MTTSATVNISVVNVNDWDPRFRYPQYELF 150
            DI +     LDYET D Y F ++A +++      A V I+++N ND  P F  P Y + 
Sbjct: 399 ADIRIRVAIPLDYETVDRYDFDLFANESVPDHVGYAKVKITLINENDNRPIFSQPLYNVS 458

Query: 151 LPHIPLADLTPGSVIGKVEAADGDKG 176
           L      ++T G+ +  V A D D G
Sbjct: 459 L----YENVTVGTSVLTVLATDNDVG 480



 Score = 40.8 bits (94), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 33/107 (30%), Positives = 50/107 (46%), Gaps = 8/107 (7%)

Query: 92   SRQGDISLMQCLDYETEDSYRFTVYATDTLMTTSAT---VNISVVNVNDWDPRFRYPQYE 148
            S  G +   + +DYE      FTV A+D      A    V + +V++ND +P F  P Y+
Sbjct: 2339 SSAGKVIANRTVDYEEVHWLNFTVRASDNGSPPRAAEIPVYLEIVDINDNNPIFDQPSYQ 2398

Query: 149  LFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSIN 194
              +      D+  G+VI +V A D D G+   +    G  E  F+IN
Sbjct: 2399 EAISE----DVPVGTVILRVTATDADSGNFALIEYSLGDGEGKFAIN 2441



 Score = 39.3 bits (90), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 58/203 (28%), Positives = 90/203 (44%), Gaps = 22/203 (10%)

Query: 31  LIVSKAGTSLRELQFSKNEYSVSAL---ENLPVNYVLLTVTTNKPRDLR---VKYWLSND 84
           +++S     +  L F  N +  + L   E+ PV     +VT    RD+    + + +S +
Sbjct: 8   VLISGCWGQVNRLPFFINHFFDTYLLISEDTPVGS---SVTQLLARDMDNDPLVFGVSGE 64

Query: 85  YGERFSISR--QGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRF 142
              RF       G + L Q LD ET+  +      +D     +  VNI V +VND  P F
Sbjct: 65  EASRFFAVEPDTGVVWLRQPLDRETKSEFTVEFSVSDHQGVITRKVNIQVGDVNDNAPTF 124

Query: 143 RYPQYELFLPHIPLADLTP-GSVIGKVEAADGD--KGDRVTLSLRGPYEKMFSINDS-GH 198
               Y + +P     + TP G+ I  V A D D   G  V  S + P  + F+I+ + G 
Sbjct: 125 HNQPYSVRIP-----ENTPVGTPIFIVNATDPDLGAGGSVLYSFQPP-SQFFAIDSARGI 178

Query: 199 ISIV-DLSALNTSTIQLVVVATD 220
           I+++ +L    T   QL V ATD
Sbjct: 179 ITVIQELDYETTQAYQLTVNATD 201


>gi|395520509|ref|XP_003764371.1| PREDICTED: protocadherin Fat 3 isoform 2 [Sarcophilus harrisii]
          Length = 4589

 Score = 65.5 bits (158), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 64/197 (32%), Positives = 93/197 (47%), Gaps = 17/197 (8%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPR---DLRVKYWLSNDYGERFSI-SRQGDISLM 100
            FS + Y+    EN     +L  V    P    + +V Y L++  G  FS+ S  G I L 
Sbjct: 3131 FSSDHYNACVYENTATKALLTRVQATDPDLGINRKVVYSLADSAGGYFSVDSSSGIIILE 3190

Query: 101  QCLDYETEDSYRFTVYATD----TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
            Q LD E + SY  +V A+D      +++ ATV I+V+++ND  P F    Y + +P    
Sbjct: 3191 QPLDRELQSSYNISVKASDQSILKALSSLATVTITVLDINDNPPVFERRDYLVTVPE--- 3247

Query: 157  ADLTPGSVIGKVEAADGDKGD--RVTLSLRGPYEK-MFSIN-DSGHISIVD-LSALNTST 211
             D +PG+ +  V A   D G    +T  +R   E+  F IN  +G IS++D L       
Sbjct: 3248 -DTSPGTEVLAVFATSKDIGTNAEITYLIRSGNERGKFMINPKTGGISVIDSLDYEMCKD 3306

Query: 212  IQLVVVATDTGNPPRQA 228
              LVV A D G P   A
Sbjct: 3307 FYLVVEAKDGGTPALSA 3323



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 71/226 (31%), Positives = 102/226 (45%), Gaps = 25/226 (11%)

Query: 23   QDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDL----RVK 78
            Q ++++ TL V     +     F    YSV  LE+LPV  V+  + T+ P DL    +V+
Sbjct: 914  QQQFSVVTLKVFLDDVNDCSPTFIPTSYSVKVLEDLPVGTVIAWLETHDP-DLGLGGQVR 972

Query: 79   YWLSNDYGERFSISR-QGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVND 137
            Y L NDY  RF I +  G I L + LDYE +  Y  TV A D          +S+ +V+ 
Sbjct: 973  YTLVNDYNGRFEIDKASGAIRLSKELDYEKQQFYNLTVRAKDKGRP------VSLSSVSF 1026

Query: 138  WDPRFRYPQYELFLPHIP----LADLTPGSVIG----KVEAADGDKG--DRVTLSLR-GP 186
             +         L  P+ P    +  +   S IG    +V A D D G    +  S+R G 
Sbjct: 1027 VEVEVVDVNENLHTPYFPDFAVVGSVKENSRIGTSVLQVTARDEDSGRDGEIQYSIRDGS 1086

Query: 187  YEKMFSIND-SGHISIVD-LSALNTSTIQLVVVATDTGNPPRQASV 230
                F+I+D SG I   D L    T +  L V ATD G  P  +++
Sbjct: 1087 GLGRFNIDDESGVIYTADILDRETTGSYWLTVYATDRGVVPLYSTI 1132



 Score = 55.1 bits (131), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 60/195 (30%), Positives = 93/195 (47%), Gaps = 16/195 (8%)

Query: 43  LQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLS-NDYGERFSIS-RQGDISLM 100
           ++F K  Y+V+  E  P   V+  V  + P    V+Y +S  +  E F I+ R G I   
Sbjct: 374 VRFEKETYNVTISEFSPPGVVVAIVKLS-PEPPGVEYRISPGEDAEYFKINPRSGLIVTA 432

Query: 101 QCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFL-PHIPLADL 159
           Q LD   ++ Y   V   +  +  SA V IS+ + ND  P F+ P YE F+   +P+   
Sbjct: 433 QPLDVSRKEVYELGVSNKEGDL--SAQVTISLEDANDHTPEFQQPSYEAFVNESVPV--- 487

Query: 160 TPGSVIGKVEAADGDKGDR--VTLSLRGPYEKMFSIND-SGHISIVDLSALNTS--TIQL 214
             G+ +  V A+D DKG+   +T S+       FSIN  +G I   +     +S    + 
Sbjct: 488 --GTSVLSVSASDKDKGENGYITYSIASLSALPFSINQFTGVIRTTEELDFESSPENYRF 545

Query: 215 VVVATDTGNPPRQAS 229
           +V A+D G+P R  S
Sbjct: 546 IVRASDWGSPYRHES 560



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 54/199 (27%), Positives = 91/199 (45%), Gaps = 11/199 (5%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGERFSIS-RQGDISLMQC 102
            +F++ EY     EN+ +   ++ ++      L  +    N  G  F+I+   G I+  + 
Sbjct: 1670 KFTQKEYQAEVNENVDIGTSVILISAISQSTLIYELKDGNVEGA-FTINPYSGVITNQKA 1728

Query: 103  LDYETEDSYRFTVYATDTL-MTTSATVNISVVNVNDWDPRFRYPQYELFLPHI-PLADLT 160
            LDYE   SY+  V AT+   M ++ATVNI +V+ ND  P F +  Y   L  + P+  + 
Sbjct: 1729 LDYERISSYQLIVQATNMAGMASNATVNIQIVDENDNPPIFLFSHYSGSLSEVAPINSIV 1788

Query: 161  PGS----VIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSGHISIVDLSALNTSTI---Q 213
              S    ++ +   AD ++   +   +     K F   DS   +I  +++L+  TI    
Sbjct: 1789 RSSGNNPLVIRATDADSNQNALLVYQIVESTAKKFFTVDSSTGAIRTIASLDHETIAHFH 1848

Query: 214  LVVVATDTGNPPRQASVPA 232
              V   D+GNP   A  PA
Sbjct: 1849 FHVHVRDSGNPQLTAESPA 1867



 Score = 48.9 bits (115), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 55/202 (27%), Positives = 93/202 (46%), Gaps = 25/202 (12%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWL-SNDYGERFSIS-RQGDISLMQC 102
            F K  Y+ S  E++ ++  +L++    P    + Y +   D   +F+I    G ++++  
Sbjct: 2186 FDKPFYTTSVNEDIEMHTPILSINATSPEGQGIIYIIVDGDPYNQFNIDFDTGVLNVISP 2245

Query: 103  LDYETEDSYRFTVYATDTLMTTSA--TVNISVVNVNDWDPRFRYPQYELFLPHIPLADLT 160
            LDYE    ++ TV A+D L    A  TV++ + +VND  P F  P Y         A L+
Sbjct: 2246 LDYEETPVFKLTVRASDALTGARAEVTVDLLINDVNDNPPIFNQPAYN--------ATLS 2297

Query: 161  PGSVIG----KVEAADGDKGDRVTLSLRGPYEKMFSINDSGHIS-----IVDLSALNTST 211
              S+IG    +V A+D D  +   +  +   +  ++  D  HI      I+    L+  +
Sbjct: 2298 EASLIGTPVLQVVASDADSENNKVVQYQ-IVQDTYNSTDYFHIDSTSGLILTARMLDHES 2356

Query: 212  IQ---LVVVATDTGNPPRQASV 230
            +Q   L V ATD G PP  + V
Sbjct: 2357 VQQSTLKVRATDNGFPPMSSEV 2378



 Score = 48.5 bits (114), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 43/139 (30%), Positives = 62/139 (44%), Gaps = 12/139 (8%)

Query: 103  LDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPG 162
            LD E +D Y   + ATD L  T A V ++V++VND  P      Y    P     D+   
Sbjct: 2990 LDREEQDVYFLNITATDGLFVTQAMVEVTVIDVNDNSPVCDQVAYTALFPE----DIPSN 3045

Query: 163  SVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIN-DSGHISIVDLSALNTSTI---QLVV 216
             +I K+ A D D G    +  SL G     F ++ +SG +    L+ L+   I    LV 
Sbjct: 3046 KIILKISAKDADIGPNGDIRYSLYGSGNNKFFLDPESGELKT--LALLDREKIPVYNLVA 3103

Query: 217  VATDTGNPPRQASVPAIMH 235
             ATD G    Q+ +  I+ 
Sbjct: 3104 RATDGGGRFCQSDIRLILE 3122



 Score = 45.4 bits (106), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 63/214 (29%), Positives = 94/214 (43%), Gaps = 28/214 (13%)

Query: 53   SALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYG-ERFSISRQ-GDISLMQCLDYET 107
            S  EN  +   +L VT    +  RD  ++Y + +  G  RF+I  + G I     LD ET
Sbjct: 1051 SVKENSRIGTSVLQVTARDEDSGRDGEIQYSIRDGSGLGRFNIDDESGVIYTADILDRET 1110

Query: 108  EDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSV 164
              SY  TVYATD     + ++  V I + +VND  P    P Y   +      D+   SV
Sbjct: 1111 TGSYWLTVYATDRGVVPLYSTIEVYIEIEDVNDNAPLTSEPIYYPVVMENSPKDV---SV 1167

Query: 165  IGKVEAADGDKGDRVTLSLR---GPYEKMFSIN-DSGHISIVD--LSALNTSTIQLVVVA 218
            I +++A D D      L+ R   G  +  F IN  +G I+     L     +   L V  
Sbjct: 1168 I-QIQAEDPDSSSNEKLTYRITSGNPQNFFVINIKTGLITTTSRKLDREQQAEHFLEVTV 1226

Query: 219  TDTGNPPRQASVPAIM----------HFPEAIVQ 242
            TD G+ P+Q++V  ++           FPE + Q
Sbjct: 1227 TDGGSSPKQSTVWVVVQVLDENDNKPQFPEKVYQ 1260



 Score = 43.5 bits (101), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 41/147 (27%), Positives = 72/147 (48%), Gaps = 19/147 (12%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDL----RVKYWLSNDYG-----ERFSI-SRQ 94
            F  + Y    +E +P+   L+ V     RD     +V Y L +D       E FSI S  
Sbjct: 2814 FDASSYEAIIMEGMPIGTRLIQVKAID-RDWGANGQVTYALHSDSSPEKIMEVFSIDSNT 2872

Query: 95   GDISLMQCLDYETEDSYRFTVYATDT----LMTTSATVNISVVNVNDWDPRFRYPQYELF 150
            G IS ++ LD+E + ++ F+V A+D      ++++  V+++V ++ND  P F    +E++
Sbjct: 2873 GWISTLKDLDHERDPTFAFSVVASDLGEAFSLSSTILVSVTVTDINDNAPVF---GHEMY 2929

Query: 151  LPHIPLADLTPGSVIGKVEAADGDKGD 177
               +  +D  PG V+  +   D D  D
Sbjct: 2930 REQVKESD-PPGEVVAVLSTWDEDTSD 2955



 Score = 42.4 bits (98), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 50/197 (25%), Positives = 87/197 (44%), Gaps = 13/197 (6%)

Query: 45   FSKNEYSVSALENL-PVNYVLLTVTTNKP--RDLRVKYWL--SNDYGERFSISRQGDISL 99
            F + +Y V+  E+  P   VL    T+K    +  + Y +   N+ G+     + G IS+
Sbjct: 3236 FERRDYLVTVPEDTSPGTEVLAVFATSKDIGTNAEITYLIRSGNERGKFMINPKTGGISV 3295

Query: 100  MQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
            +  LDYE    +   V A D     ++  ATVNI++ +VND  P+F    Y   +     
Sbjct: 3296 IDSLDYEMCKDFYLVVEAKDGGTPALSAVATVNINLTDVNDNAPKFNQEVYSAVISED-- 3353

Query: 157  ADLTPGSVIGKVEAADGDKGDRVTLSL-RGPYEKMFSINDS-GHISI-VDLSALNTSTIQ 213
            A +    ++   E  D     ++  S+  G  +  F+++   G I +   L     S   
Sbjct: 3354 ASIGDSVIVLIAEDVDSPPNGQIRFSIVSGDRDNEFAVDSVLGLIKVKKKLDRERVSGYS 3413

Query: 214  LVVVATDTGNPPRQASV 230
            L++ ATD+G P   ++V
Sbjct: 3414 LLIQATDSGIPAMSSTV 3430



 Score = 40.8 bits (94), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 66/231 (28%), Positives = 104/231 (45%), Gaps = 27/231 (11%)

Query: 27   ALATLIVSKAGTSLRELQFSKNEYSVSALEN-LPVNYVLLTVTTNKPRDLRVKYWLSNDY 85
            A+ T++V +A  S   L F+++ Y  S  EN   +  V +        +  + Y + N  
Sbjct: 1966 AMVTIMVKEAMDS--GLHFTQSFYFASISENSTNITKVAIVNAIGNRLNEPLIYRILNP- 2022

Query: 86   GERFSI-SRQGDISLMQC-LDYETEDSYRFTVYAT---DTLMTTSATVNISVVNVNDWDP 140
            G +F I S  G I       D E ++ Y   V A+   D L      V + + ++ND  P
Sbjct: 2023 GNKFKIKSTSGVIQTTGVPFDREEQELYDLVVEASRELDHLRVARVVVRVIIEDINDNSP 2082

Query: 141  RFRYPQYELFLPHIPLA--DLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIN-D 195
             F      + LP+      D  PG++I +V A D DKG    VT SL+  Y   F IN +
Sbjct: 2083 VF------VGLPYYAAVQVDAEPGTLIYRVSALDRDKGANGEVTYSLQEDY-GHFEINPE 2135

Query: 196  SGHISIVDLSALNTSTIQ--LVVVATDTGNPPRQASVPAIMHFPEAIVQQA 244
            SG + + +    + S I+  ++++A D G P   AS+      P  IV +A
Sbjct: 2136 SGSVFLKEAFNSDLSNIEYGVIILAKDGGKPALSASI----ELPITIVNKA 2182



 Score = 40.4 bits (93), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 50/201 (24%), Positives = 82/201 (40%), Gaps = 18/201 (8%)

Query: 44   QFSKNEYSVSALEN-LPVNYVLLTVTTNKPRDLRVKYWLSNDYG----ERFSI-SRQGDI 97
            +FS++ Y V+  E+ LP   +L    T++    ++ Y + +        +F I +  G +
Sbjct: 1459 EFSQSSYDVTISEDVLPDTEILQVEATDRDEKHKLSYTIHSSIDSVSMRKFRIDASTGVL 1518

Query: 98   SLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHI 154
             + + LD+E +D +   +   D         A V ++V + ND  P F  P YE  +   
Sbjct: 1519 YIAERLDHEAQDKHILNIMVRDQEFPYRRNLARVIVNVEDANDHSPYFTSPLYEASV--- 1575

Query: 155  PLADLTPGSVIGKVEAADGDKGDRVTLSLR---GPYEKMFSINDSGHISIVDLSALNTST 211
                   GS + +V A D D+G+   L      G     F I     I  V      T+ 
Sbjct: 1576 -FESAALGSAVLQVTALDKDRGENAELLYSIEAGNTGNTFKIEPILGIITVSKEPDMTTM 1634

Query: 212  IQLV--VVATDTGNPPRQASV 230
             Q V  +  TD G PP  A+ 
Sbjct: 1635 GQFVLSIKVTDQGTPPMSATA 1655



 Score = 37.7 bits (86), Expect = 9.8,   Method: Compositional matrix adjust.
 Identities = 56/225 (24%), Positives = 99/225 (44%), Gaps = 17/225 (7%)

Query: 13   LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVN---YVLLTVTT 69
            LVV A         A+AT+ ++    +    +F++  YS    E+  +     VL+    
Sbjct: 3309 LVVEAKDGGTPALSAVATVNINLTDVNDNAPKFNQEVYSAVISEDASIGDSVIVLIAEDV 3368

Query: 70   NKPRDLRVKYWL-SNDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDT---LMTT 124
            + P + ++++ + S D    F++ S  G I + + LD E    Y   + ATD+    M++
Sbjct: 3369 DSPPNGQIRFSIVSGDRDNEFAVDSVLGLIKVKKKLDRERVSGYSLLIQATDSGIPAMSS 3428

Query: 125  SATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGD---KGDRVTL 181
            + TVNI + +VND  P F    Y   +      +   G+ I ++   D D    G   T 
Sbjct: 3429 TVTVNIDISDVNDNGPVFTPANYTAVIQE----NKPVGTSILQLMVTDRDSFHNGPPFTF 3484

Query: 182  S-LRGPYEKMFSINDSGHI-SIVDLSALNTSTIQLVVVATDTGNP 224
            + L G  E+ F ++  G + S V     ++    L + A D+G P
Sbjct: 3485 TILAGNEEEEFVLDPHGILRSAVIFRHTDSPEYVLYIQAKDSGKP 3529


>gi|395520507|ref|XP_003764370.1| PREDICTED: protocadherin Fat 3 isoform 1 [Sarcophilus harrisii]
          Length = 4557

 Score = 65.5 bits (158), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 64/197 (32%), Positives = 93/197 (47%), Gaps = 17/197 (8%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPR---DLRVKYWLSNDYGERFSI-SRQGDISLM 100
            FS + Y+    EN     +L  V    P    + +V Y L++  G  FS+ S  G I L 
Sbjct: 3131 FSSDHYNACVYENTATKALLTRVQATDPDLGINRKVVYSLADSAGGYFSVDSSSGIIILE 3190

Query: 101  QCLDYETEDSYRFTVYATD----TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
            Q LD E + SY  +V A+D      +++ ATV I+V+++ND  P F    Y + +P    
Sbjct: 3191 QPLDRELQSSYNISVKASDQSILKALSSLATVTITVLDINDNPPVFERRDYLVTVPE--- 3247

Query: 157  ADLTPGSVIGKVEAADGDKGD--RVTLSLRGPYEK-MFSIN-DSGHISIVD-LSALNTST 211
             D +PG+ +  V A   D G    +T  +R   E+  F IN  +G IS++D L       
Sbjct: 3248 -DTSPGTEVLAVFATSKDIGTNAEITYLIRSGNERGKFMINPKTGGISVIDSLDYEMCKD 3306

Query: 212  IQLVVVATDTGNPPRQA 228
              LVV A D G P   A
Sbjct: 3307 FYLVVEAKDGGTPALSA 3323



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 71/226 (31%), Positives = 102/226 (45%), Gaps = 25/226 (11%)

Query: 23   QDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDL----RVK 78
            Q ++++ TL V     +     F    YSV  LE+LPV  V+  + T+ P DL    +V+
Sbjct: 914  QQQFSVVTLKVFLDDVNDCSPTFIPTSYSVKVLEDLPVGTVIAWLETHDP-DLGLGGQVR 972

Query: 79   YWLSNDYGERFSISR-QGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVND 137
            Y L NDY  RF I +  G I L + LDYE +  Y  TV A D          +S+ +V+ 
Sbjct: 973  YTLVNDYNGRFEIDKASGAIRLSKELDYEKQQFYNLTVRAKDKGRP------VSLSSVSF 1026

Query: 138  WDPRFRYPQYELFLPHIP----LADLTPGSVIG----KVEAADGDKG--DRVTLSLR-GP 186
             +         L  P+ P    +  +   S IG    +V A D D G    +  S+R G 
Sbjct: 1027 VEVEVVDVNENLHTPYFPDFAVVGSVKENSRIGTSVLQVTARDEDSGRDGEIQYSIRDGS 1086

Query: 187  YEKMFSIND-SGHISIVD-LSALNTSTIQLVVVATDTGNPPRQASV 230
                F+I+D SG I   D L    T +  L V ATD G  P  +++
Sbjct: 1087 GLGRFNIDDESGVIYTADILDRETTGSYWLTVYATDRGVVPLYSTI 1132



 Score = 55.1 bits (131), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 60/195 (30%), Positives = 93/195 (47%), Gaps = 16/195 (8%)

Query: 43  LQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLS-NDYGERFSIS-RQGDISLM 100
           ++F K  Y+V+  E  P   V+  V  + P    V+Y +S  +  E F I+ R G I   
Sbjct: 374 VRFEKETYNVTISEFSPPGVVVAIVKLS-PEPPGVEYRISPGEDAEYFKINPRSGLIVTA 432

Query: 101 QCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFL-PHIPLADL 159
           Q LD   ++ Y   V   +  +  SA V IS+ + ND  P F+ P YE F+   +P+   
Sbjct: 433 QPLDVSRKEVYELGVSNKEGDL--SAQVTISLEDANDHTPEFQQPSYEAFVNESVPV--- 487

Query: 160 TPGSVIGKVEAADGDKGDR--VTLSLRGPYEKMFSIND-SGHISIVDLSALNTS--TIQL 214
             G+ +  V A+D DKG+   +T S+       FSIN  +G I   +     +S    + 
Sbjct: 488 --GTSVLSVSASDKDKGENGYITYSIASLSALPFSINQFTGVIRTTEELDFESSPENYRF 545

Query: 215 VVVATDTGNPPRQAS 229
           +V A+D G+P R  S
Sbjct: 546 IVRASDWGSPYRHES 560



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 54/199 (27%), Positives = 91/199 (45%), Gaps = 11/199 (5%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGERFSIS-RQGDISLMQC 102
            +F++ EY     EN+ +   ++ ++      L  +    N  G  F+I+   G I+  + 
Sbjct: 1670 KFTQKEYQAEVNENVDIGTSVILISAISQSTLIYELKDGNVEGA-FTINPYSGVITNQKA 1728

Query: 103  LDYETEDSYRFTVYATDTL-MTTSATVNISVVNVNDWDPRFRYPQYELFLPHI-PLADLT 160
            LDYE   SY+  V AT+   M ++ATVNI +V+ ND  P F +  Y   L  + P+  + 
Sbjct: 1729 LDYERISSYQLIVQATNMAGMASNATVNIQIVDENDNPPIFLFSHYSGSLSEVAPINSIV 1788

Query: 161  PGS----VIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSGHISIVDLSALNTSTI---Q 213
              S    ++ +   AD ++   +   +     K F   DS   +I  +++L+  TI    
Sbjct: 1789 RSSGNNPLVIRATDADSNQNALLVYQIVESTAKKFFTVDSSTGAIRTIASLDHETIAHFH 1848

Query: 214  LVVVATDTGNPPRQASVPA 232
              V   D+GNP   A  PA
Sbjct: 1849 FHVHVRDSGNPQLTAESPA 1867



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 55/202 (27%), Positives = 93/202 (46%), Gaps = 25/202 (12%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWL-SNDYGERFSIS-RQGDISLMQC 102
            F K  Y+ S  E++ ++  +L++    P    + Y +   D   +F+I    G ++++  
Sbjct: 2186 FDKPFYTTSVNEDIEMHTPILSINATSPEGQGIIYIIVDGDPYNQFNIDFDTGVLNVISP 2245

Query: 103  LDYETEDSYRFTVYATDTLMTTSA--TVNISVVNVNDWDPRFRYPQYELFLPHIPLADLT 160
            LDYE    ++ TV A+D L    A  TV++ + +VND  P F  P Y         A L+
Sbjct: 2246 LDYEETPVFKLTVRASDALTGARAEVTVDLLINDVNDNPPIFNQPAYN--------ATLS 2297

Query: 161  PGSVIG----KVEAADGDKGDRVTLSLRGPYEKMFSINDSGHIS-----IVDLSALNTST 211
              S+IG    +V A+D D  +   +  +   +  ++  D  HI      I+    L+  +
Sbjct: 2298 EASLIGTPVLQVVASDADSENNKVVQYQ-IVQDTYNSTDYFHIDSTSGLILTARMLDHES 2356

Query: 212  IQ---LVVVATDTGNPPRQASV 230
            +Q   L V ATD G PP  + V
Sbjct: 2357 VQQSTLKVRATDNGFPPMSSEV 2378



 Score = 48.5 bits (114), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 45/157 (28%), Positives = 70/157 (44%), Gaps = 15/157 (9%)

Query: 88   RFS---ISRQGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRY 144
            RF+   +  +  + + + LD E +D Y   + ATD L  T A V ++V++VND  P    
Sbjct: 2972 RFALGLVQNEWKVYVKRPLDREEQDVYFLNITATDGLFVTQAMVEVTVIDVNDNSPVCDQ 3031

Query: 145  PQYELFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIN-DSGHISI 201
              Y    P     D+    +I K+ A D D G    +  SL G     F ++ +SG +  
Sbjct: 3032 VAYTALFPE----DIPSNKIILKISAKDADIGPNGDIRYSLYGSGNNKFFLDPESGELKT 3087

Query: 202  VDLSALNTSTI---QLVVVATDTGNPPRQASVPAIMH 235
              L+ L+   I    LV  ATD G    Q+ +  I+ 
Sbjct: 3088 --LALLDREKIPVYNLVARATDGGGRFCQSDIRLILE 3122



 Score = 45.4 bits (106), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 63/214 (29%), Positives = 94/214 (43%), Gaps = 28/214 (13%)

Query: 53   SALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYG-ERFSISRQ-GDISLMQCLDYET 107
            S  EN  +   +L VT    +  RD  ++Y + +  G  RF+I  + G I     LD ET
Sbjct: 1051 SVKENSRIGTSVLQVTARDEDSGRDGEIQYSIRDGSGLGRFNIDDESGVIYTADILDRET 1110

Query: 108  EDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSV 164
              SY  TVYATD     + ++  V I + +VND  P    P Y   +      D+   SV
Sbjct: 1111 TGSYWLTVYATDRGVVPLYSTIEVYIEIEDVNDNAPLTSEPIYYPVVMENSPKDV---SV 1167

Query: 165  IGKVEAADGDKGDRVTLSLR---GPYEKMFSIN-DSGHISIVD--LSALNTSTIQLVVVA 218
            I +++A D D      L+ R   G  +  F IN  +G I+     L     +   L V  
Sbjct: 1168 I-QIQAEDPDSSSNEKLTYRITSGNPQNFFVINIKTGLITTTSRKLDREQQAEHFLEVTV 1226

Query: 219  TDTGNPPRQASVPAIM----------HFPEAIVQ 242
            TD G+ P+Q++V  ++           FPE + Q
Sbjct: 1227 TDGGSSPKQSTVWVVVQVLDENDNKPQFPEKVYQ 1260



 Score = 43.5 bits (101), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 41/147 (27%), Positives = 72/147 (48%), Gaps = 19/147 (12%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDL----RVKYWLSNDYG-----ERFSI-SRQ 94
            F  + Y    +E +P+   L+ V     RD     +V Y L +D       E FSI S  
Sbjct: 2814 FDASSYEAIIMEGMPIGTRLIQVKAID-RDWGANGQVTYALHSDSSPEKIMEVFSIDSNT 2872

Query: 95   GDISLMQCLDYETEDSYRFTVYATDT----LMTTSATVNISVVNVNDWDPRFRYPQYELF 150
            G IS ++ LD+E + ++ F+V A+D      ++++  V+++V ++ND  P F    +E++
Sbjct: 2873 GWISTLKDLDHERDPTFAFSVVASDLGEAFSLSSTILVSVTVTDINDNAPVF---GHEMY 2929

Query: 151  LPHIPLADLTPGSVIGKVEAADGDKGD 177
               +  +D  PG V+  +   D D  D
Sbjct: 2930 REQVKESD-PPGEVVAVLSTWDEDTSD 2955



 Score = 42.4 bits (98), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 50/197 (25%), Positives = 87/197 (44%), Gaps = 13/197 (6%)

Query: 45   FSKNEYSVSALENL-PVNYVLLTVTTNKP--RDLRVKYWL--SNDYGERFSISRQGDISL 99
            F + +Y V+  E+  P   VL    T+K    +  + Y +   N+ G+     + G IS+
Sbjct: 3236 FERRDYLVTVPEDTSPGTEVLAVFATSKDIGTNAEITYLIRSGNERGKFMINPKTGGISV 3295

Query: 100  MQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
            +  LDYE    +   V A D     ++  ATVNI++ +VND  P+F    Y   +     
Sbjct: 3296 IDSLDYEMCKDFYLVVEAKDGGTPALSAVATVNINLTDVNDNAPKFNQEVYSAVISED-- 3353

Query: 157  ADLTPGSVIGKVEAADGDKGDRVTLSL-RGPYEKMFSINDS-GHISI-VDLSALNTSTIQ 213
            A +    ++   E  D     ++  S+  G  +  F+++   G I +   L     S   
Sbjct: 3354 ASIGDSVIVLIAEDVDSPPNGQIRFSIVSGDRDNEFAVDSVLGLIKVKKKLDRERVSGYS 3413

Query: 214  LVVVATDTGNPPRQASV 230
            L++ ATD+G P   ++V
Sbjct: 3414 LLIQATDSGIPAMSSTV 3430



 Score = 40.8 bits (94), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 67/236 (28%), Positives = 105/236 (44%), Gaps = 37/236 (15%)

Query: 27   ALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTT------NKPRDLRVKYW 80
            A+ T++V +A  S   L F+++ Y  S  EN   N   + +        N+P   R+   
Sbjct: 1966 AMVTIMVKEAMDS--GLHFTQSFYFASISEN-STNITKVAIVNAIGNRLNEPLIYRIL-- 2020

Query: 81   LSNDYGERFSI-SRQGDISLMQC-LDYETEDSYRFTVYAT---DTLMTTSATVNISVVNV 135
               + G +F I S  G I       D E ++ Y   V A+   D L      V + + ++
Sbjct: 2021 ---NPGNKFKIKSTSGVIQTTGVPFDREEQELYDLVVEASRELDHLRVARVVVRVIIEDI 2077

Query: 136  NDWDPRFRYPQYELFLPHIPLA--DLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMF 191
            ND  P F      + LP+      D  PG++I +V A D DKG    VT SL+  Y   F
Sbjct: 2078 NDNSPVF------VGLPYYAAVQVDAEPGTLIYRVSALDRDKGANGEVTYSLQEDY-GHF 2130

Query: 192  SIN-DSGHISIVDLSALNTSTIQ--LVVVATDTGNPPRQASVPAIMHFPEAIVQQA 244
             IN +SG + + +    + S I+  ++++A D G P   AS+      P  IV +A
Sbjct: 2131 EINPESGSVFLKEAFNSDLSNIEYGVIILAKDGGKPALSASI----ELPITIVNKA 2182



 Score = 40.0 bits (92), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 50/201 (24%), Positives = 82/201 (40%), Gaps = 18/201 (8%)

Query: 44   QFSKNEYSVSALEN-LPVNYVLLTVTTNKPRDLRVKYWLSNDYG----ERFSI-SRQGDI 97
            +FS++ Y V+  E+ LP   +L    T++    ++ Y + +        +F I +  G +
Sbjct: 1459 EFSQSSYDVTISEDVLPDTEILQVEATDRDEKHKLSYTIHSSIDSVSMRKFRIDASTGVL 1518

Query: 98   SLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHI 154
             + + LD+E +D +   +   D         A V ++V + ND  P F  P YE  +   
Sbjct: 1519 YIAERLDHEAQDKHILNIMVRDQEFPYRRNLARVIVNVEDANDHSPYFTSPLYEASV--- 1575

Query: 155  PLADLTPGSVIGKVEAADGDKGDRVTLSLR---GPYEKMFSINDSGHISIVDLSALNTST 211
                   GS + +V A D D+G+   L      G     F I     I  V      T+ 
Sbjct: 1576 -FESAALGSAVLQVTALDKDRGENAELLYSIEAGNTGNTFKIEPILGIITVSKEPDMTTM 1634

Query: 212  IQLV--VVATDTGNPPRQASV 230
             Q V  +  TD G PP  A+ 
Sbjct: 1635 GQFVLSIKVTDQGTPPMSATA 1655



 Score = 37.7 bits (86), Expect = 9.4,   Method: Compositional matrix adjust.
 Identities = 56/225 (24%), Positives = 99/225 (44%), Gaps = 17/225 (7%)

Query: 13   LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVN---YVLLTVTT 69
            LVV A         A+AT+ ++    +    +F++  YS    E+  +     VL+    
Sbjct: 3309 LVVEAKDGGTPALSAVATVNINLTDVNDNAPKFNQEVYSAVISEDASIGDSVIVLIAEDV 3368

Query: 70   NKPRDLRVKYWL-SNDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDT---LMTT 124
            + P + ++++ + S D    F++ S  G I + + LD E    Y   + ATD+    M++
Sbjct: 3369 DSPPNGQIRFSIVSGDRDNEFAVDSVLGLIKVKKKLDRERVSGYSLLIQATDSGIPAMSS 3428

Query: 125  SATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGD---KGDRVTL 181
            + TVNI + +VND  P F    Y   +      +   G+ I ++   D D    G   T 
Sbjct: 3429 TVTVNIDISDVNDNGPVFTPANYTAVIQE----NKPVGTSILQLMVTDRDSFHNGPPFTF 3484

Query: 182  S-LRGPYEKMFSINDSGHI-SIVDLSALNTSTIQLVVVATDTGNP 224
            + L G  E+ F ++  G + S V     ++    L + A D+G P
Sbjct: 3485 TILAGNEEEEFVLDPHGILRSAVIFRHTDSPEYVLYIQAKDSGKP 3529


>gi|307197254|gb|EFN78559.1| Protein dachsous [Harpegnathos saltator]
          Length = 2617

 Score = 65.5 bits (158), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 71/240 (29%), Positives = 104/240 (43%), Gaps = 27/240 (11%)

Query: 14  VVRAIQYDNQDRYALATLIVSKAGTSLR-----ELQ--------FSKNEYSVSALENLPV 60
           + R + Y+ Q R++L    +   G S       E+Q        F +NEY V   E   +
Sbjct: 208 LARRLDYETQQRHSLLIRALDGDGYSANLSLSVEVQDVNDNPPRFERNEYHVEVPEGARL 267

Query: 61  NYVLLTVTT---NKPRDLRVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYA 117
           +  +L VT    +   + RV Y L      R +    G I L+Q LD ET D    TV+A
Sbjct: 268 DSQILQVTAVDLDTGNNARVSYRLQGSPAFRIN-PNTGWIYLVQNLDRETVDRITLTVFA 326

Query: 118 TDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGD 174
            D      T +A+V + V++ ND DPRF    Y   L    L +L  G+++G V A D D
Sbjct: 327 ADNGSPAATANASVLVKVLDDNDNDPRFEKDFYGFKL----LENLPSGTLVGSVNATDPD 382

Query: 175 --KGDRVTLSLRGPYEKMFSINDSGHISIVDLSALNTSTI-QLVVVATDTGNPPRQASVP 231
             K   +  S+           D+G I+  +     T  + +LV+ A D G P R   VP
Sbjct: 383 LDKNSLLRYSVVQSNSSFAVDPDTGKITTREPLDRETKEVHELVLEARDQGTPSRATRVP 442



 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/162 (29%), Positives = 80/162 (49%), Gaps = 8/162 (4%)

Query: 77  VKYWLSNDYGERFSISRQ-GDISLMQCLDYETEDSYRFTVYATD-TLMTTSATVNISVVN 134
           ++Y L+ +  + F I  Q G++ L + LDYET+  +   + A D    + + ++++ V +
Sbjct: 185 IRYILAQNSNDLFGIDAQSGELYLARRLDYETQQRHSLLIRALDGDGYSANLSLSVEVQD 244

Query: 135 VNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSIN 194
           VND  PRF   +Y + +P     D    S I +V A D D G+   +S R      F IN
Sbjct: 245 VNDNPPRFERNEYHVEVPEGARLD----SQILQVTAVDLDTGNNARVSYRLQGSPAFRIN 300

Query: 195 -DSGHISIV-DLSALNTSTIQLVVVATDTGNPPRQASVPAIM 234
            ++G I +V +L       I L V A D G+P   A+   ++
Sbjct: 301 PNTGWIYLVQNLDRETVDRITLTVFAADNGSPAATANASVLV 342



 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 84/323 (26%), Positives = 137/323 (42%), Gaps = 56/323 (17%)

Query: 25   RYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSND 84
            R ALA L V     +    +F  +EY     EN PV     TV + +  DL    + S +
Sbjct: 1974 RCALAKLRVHLEDVNDNSPKFPVSEYLEFVGENEPVG---TTVFSARASDLDRGIFGSLN 2030

Query: 85   YG----------------ERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDTLMTTSAT 127
            Y                 + F++  + G ++     DYE  + Y FT+ ATD    T+A 
Sbjct: 2031 YSIVSAAATGFSDIDDSWKLFAVDDKSGIVTARAVFDYEQRNRYAFTLRATDMGGRTAAV 2090

Query: 128  -VNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSL- 183
             V + + + +++ P+F    Y   + +I  A   PG+VIG V A D DKG   RV   L 
Sbjct: 2091 RVRVEIESRDEFYPQFTEKTYRFVIRNI--AQALPGTVIGHVTATDRDKGPDGRVVYQLI 2148

Query: 184  -RGPYEKMFSINDS----GHISIVDLSALNTSTIQLVVVATDTGNPPRQASVPAI----- 233
             + PY K+     +      +  VD+SA     +  ++V+  +G   RQ S+  I     
Sbjct: 2149 SQHPYIKLNRTTGALIVKQKLMHVDMSA---EELTKLMVSASSG---RQGSLSNITIVEI 2202

Query: 234  --MHFPEAIVQQASSKLNSGTSSTVLIILGVV-----------LIVLGFVIILLILYIHK 280
              M   E    + ++ +++G +  +    G+            L+VL F  I L  +I  
Sbjct: 2203 TLMEDDEPNGARGATTMDNGLNMAMATGGGLADWALGLLIAVLLLVLAFGTIFLYFHIRN 2262

Query: 281  NKHTKNNGPPGSSHSKNDSFLSN 303
             +H K    PG S ++N++  SN
Sbjct: 2263 RRHKKPGTKPGLS-AENNATASN 2284



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 59/195 (30%), Positives = 83/195 (42%), Gaps = 14/195 (7%)

Query: 51   SVSALENLPVNYVLLTVTTNKPRDLRV-KYWLSNDYGER-FSISR-QGDISLMQCLDYET 107
            ++S  E  P+  VL T+T N      V  Y  SN      FSI R  G + L Q LD ET
Sbjct: 1589 AISVSEGAPMGSVLTTITANDVDSSPVLTYRFSNLTSPGPFSIDRYGGKVVLRQRLDAET 1648

Query: 108  EDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGK 167
               Y   V A+D +  T   + + V ++ND  PRF    Y   L   P +       I  
Sbjct: 1649 RSEYTVQVIASDGIHETMTDLTVRVTDLNDNTPRFEQAAYVAVLSEGPDS----LQEILT 1704

Query: 168  VEAADGD---KGDRVTLSLRGPYEKMFSINDSGHISIVDLSALNT---STIQLVVVATDT 221
            V A D D   +  R+   L  P  K FS++    +  V+ +A+       + LV+VA D 
Sbjct: 1705 VNATDDDLTEENSRIRYYLLRPV-KGFSVHPVTGVLTVNRTAIPRPLPKELDLVIVAEDY 1763

Query: 222  GNPPRQASVPAIMHF 236
            G PP  +    I+  
Sbjct: 1764 GMPPASSVCSVIVRL 1778



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 60/194 (30%), Positives = 90/194 (46%), Gaps = 19/194 (9%)

Query: 49   EYSVSALENLPVNYVLLTVTTNKP---RDLRVKYWLSNDYGERFSISR-QGDISLMQCLD 104
            +Y  +  E++  +  ++TV    P    + ++ Y ++ +    F +    G I+    LD
Sbjct: 1125 KYVTTISEDVAPDSSVMTVRATDPDQGENGKITYAIAEETSWLFRVDNLTGVITTAGSLD 1184

Query: 105  YETEDSYRFTVYATDT----LMTTSATVNISVVNVNDWDPRF-RYPQYELFLPHIPLADL 159
             E + SY F V A D+       TS  V I++ +VND  P F +YP    F   +  A L
Sbjct: 1185 RERQSSYTFLVVAMDSGKYDAKNTSIPVEINISDVNDNAPVFTKYP----FRMDVSTATL 1240

Query: 160  TPGSVIGKVEAADGDKG--DRVTLSLRGPYEK-MFSIN-DSGHI-SIVDLSALNTSTIQL 214
             PG  I +V A D D+G    V  S     EK  F I+  +G I + + LS  N     L
Sbjct: 1241 -PGQNILRVSAHDADEGANGEVLYSFLHEVEKPKFRIHPTTGMITATLSLSQDNGKVYHL 1299

Query: 215  VVVATDTGNPPRQA 228
             V+A D GNPP+ A
Sbjct: 1300 EVLARDKGNPPQTA 1313



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 45/143 (31%), Positives = 69/143 (48%), Gaps = 17/143 (11%)

Query: 95  GDISLMQCLDYETEDSYRFTVYATDTL-----MTTSATVNISVVNVNDWDPRFRYPQYEL 149
           G ++L + LD E    Y   + A+D       + ++ T  I V++ ND DP F  P+   
Sbjct: 728 GALTLAKSLDREERAEYTLILKASDRAPPGEQLASTVTARIIVLDQNDNDPVFVAPEST- 786

Query: 150 FLPHIPLA-DLTPGSVIGKVEAADGDKGDRVTLSL---RGPYEKMFSIN-DSGHISIVDL 204
               I +A +L PG+ + +V A D D GD   +S     G  E  FS+  +SG   IV L
Sbjct: 787 ---KIAVASNLQPGASLVRVVAVDKDSGDNGQVSYVISSGNEEGRFSVGYESG---IVSL 840

Query: 205 SALNTSTIQLVVVATDTGNPPRQ 227
                  + L + A+D G+PPR+
Sbjct: 841 EKPIARPMDLEITASDHGSPPRK 863



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 64/241 (26%), Positives = 110/241 (45%), Gaps = 35/241 (14%)

Query: 11  ITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTN 70
           ITL V A    +    A A+++V     +  + +F K+ Y    LENLP   ++ +V   
Sbjct: 320 ITLTVFAADNGSPAATANASVLVKVLDDNDNDPRFEKDFYGFKLLENLPSGTLVGSVNAT 379

Query: 71  KPRDLRVKYWLSNDYGERFSISRQ----------GDISLMQCLDYETEDSYRFTVYATDT 120
            P DL     L      R+S+ +           G I+  + LD ET++ +   + A D 
Sbjct: 380 DP-DLDKNSLL------RYSVVQSNSSFAVDPDTGKITTREPLDRETKEVHELVLEARDQ 432

Query: 121 LMTTSAT---VNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGD 177
              + AT   + ++V++VND  P    PQ ++        +  PG+ + +V A D D G+
Sbjct: 433 GTPSRATRVPMKVTVLDVNDNSPEIVDPQRDVVSVR---EEQPPGTEVARVRALDTDFGE 489

Query: 178 R--VTLSLRGPYEK----MFSIND-SGHI---SIVDLSALNTSTIQLVVVATDTGNPPRQ 227
              VT S+    +     +F+I+  +G I   +++D    N    ++ V ATD G+PPR 
Sbjct: 490 NASVTYSILKDRDSDGYNVFTIDPITGMIRTKAVLDHEERN--VYRVSVKATDAGHPPRH 547

Query: 228 A 228
           +
Sbjct: 548 S 548


>gi|344253926|gb|EGW10030.1| Cadherin EGF LAG seven-pass G-type receptor 2 [Cricetulus griseus]
          Length = 2335

 Score = 65.5 bits (158), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 68/219 (31%), Positives = 102/219 (46%), Gaps = 22/219 (10%)

Query: 25  RYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWL 81
           R ALATL +    T+  +  F + EY  S  ENL V Y +LTV     + P +  + Y L
Sbjct: 103 RSALATLTILVTDTNDHDPVFEQQEYKESLRENLEVGYEVLTVRATDGDAPPNANILYRL 162

Query: 82  SNDYG----ERFSIS-RQGDISLMQCLDYETEDSYRFTVYATDT-----LMTTSATVNIS 131
               G    E F I  R G I     +D E  +SY+ TV A+D        +++A V +S
Sbjct: 163 LEGAGGSPSEVFEIDPRSGVIRTRGPVDREEVESYKLTVEASDQGRDPGPRSSTAAVFLS 222

Query: 132 VVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYE 188
           V + ND  P+F   +Y + +      D+TPG+ + +V A+D DKG    +    + G   
Sbjct: 223 VEDDNDNAPQFSEKRYVVQVRE----DVTPGAPVLRVTASDRDKGSNALVHYSIMSGNAR 278

Query: 189 KMFSIN-DSGHISIVD-LSALNTSTIQLVVVATDTGNPP 225
             F ++  +G + +V  L    T    L + A D G PP
Sbjct: 279 GQFYLDAQTGALDVVSPLDYETTKEYTLRIRAQDGGRPP 317



 Score = 45.1 bits (105), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 50/191 (26%), Positives = 87/191 (45%), Gaps = 14/191 (7%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRDLR--VKYWL-SNDYGERFSISRQ---GDIS 98
           F++ EY+V   E+  V   ++TV+    RD    + Y + S +   RFSI+ Q   G +S
Sbjct: 468 FTQPEYTVRLNEDAAVGTSVVTVSAVD-RDAHSVITYQITSGNTRNRFSITSQSGGGLVS 526

Query: 99  LMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLAD 158
           L   LDY+ E  Y   V A+D     +A + ++V + N   P F+   Y + +      D
Sbjct: 527 LALPLDYKLERQYVLAVTASDGTRQDTAQIVVNVTDANTHRPVFQSSHYTVNVNE----D 582

Query: 159 LTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSINDSGHISI-VDLSALNTSTIQLV 215
              G+ +  + A D D G+  R+T  +     +     D+G ++   +L   +  +  L 
Sbjct: 583 RPAGTTVVLISATDEDTGENARITYFMEDSIPQFRIDADTGAVTTQAELDYEDQVSYTLA 642

Query: 216 VVATDTGNPPR 226
           + A D G P +
Sbjct: 643 ITARDNGIPQK 653



 Score = 44.7 bits (104), Expect = 0.079,   Method: Compositional matrix adjust.
 Identities = 38/121 (31%), Positives = 57/121 (47%), Gaps = 8/121 (6%)

Query: 89  FSISRQGDISLMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYP 145
           F  +  G IS+   LD E  D Y F V A D     +T SA+V++++++VND +P F  P
Sbjct: 412 FGNNGTGWISVAAELDREEVDFYSFGVEARDHGTPALTASASVSVTILDVNDNNPTFTQP 471

Query: 146 QYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSL-RGPYEKMFSINDSGHISIVDL 204
           +Y + L      D   G+ +  V A D D    +T  +  G     FSI       +V L
Sbjct: 472 EYTVRLNE----DAAVGTSVVTVSAVDRDAHSVITYQITSGNTRNRFSITSQSGGGLVSL 527

Query: 205 S 205
           +
Sbjct: 528 A 528



 Score = 44.3 bits (103), Expect = 0.091,   Method: Compositional matrix adjust.
 Identities = 40/149 (26%), Positives = 69/149 (46%), Gaps = 10/149 (6%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWL-SNDYGERFSIS-RQGDISL 99
           F ++E+ V   EN P+   +  VT   P +    ++ Y +   +  E F +    G+++ 
Sbjct: 779 FEQDEFDVFVEENSPIGLAVARVTATDPDEGTNAQIMYQIVEGNIPEVFQLDIFSGELTA 838

Query: 100 MQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPH--IPLA 157
           +  LDYE    Y   + AT   + + ATV++ +++ ND  P      +E+   +     +
Sbjct: 839 LVDLDYEDRPEYILVIQATSAPLVSRATVHVRLLDRNDNPPVLG--NFEILFNNYVTNRS 896

Query: 158 DLTPGSVIGKVEAADGDKGDRVTLSL-RG 185
              PG  IG+V A D D  D +T S  RG
Sbjct: 897 SSFPGGAIGRVPAHDPDISDSLTYSFERG 925


>gi|326919108|ref|XP_003205825.1| PREDICTED: protocadherin Fat 1-like [Meleagris gallopavo]
          Length = 4590

 Score = 65.5 bits (158), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 62/202 (30%), Positives = 102/202 (50%), Gaps = 20/202 (9%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDL----RVKYWLSNDYG-ERFSISRQGDISL 99
            FS+NEY V   EN P+ + L+TV   +  D      + Y + ND+  +RF IS +G I  
Sbjct: 2493 FSQNEYEVELAENAPL-HTLVTVVRARDEDSGTYGHITYHIINDFAKDRFYISERGQIFT 2551

Query: 100  MQCLDYET--EDSYRFTVYATDTLMTTS-ATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
             + LD ET  E     ++ A D+    +  TVN+ + + ND  P+FR  +YE+ +     
Sbjct: 2552 SEKLDRETQAEKVIAISLMAKDSGGKVAFCTVNVILTDDNDNAPQFRAMEYEVNIG---- 2607

Query: 157  ADLTPGSVIGKVEAADGDKGDR--VTLSLRGPYEKM---FSIND-SGHISIVD-LSALNT 209
            +D+  G+ + KV A+D D+G    +T ++    E +     I+  SG I+  + L  L  
Sbjct: 2608 SDVPRGTSVIKVWASDADEGTNADITYTIEAESENVKENLEIDSLSGIITTKESLIGLEN 2667

Query: 210  STIQLVVVATDTGNPPRQASVP 231
              +   V A D G+P +++ VP
Sbjct: 2668 EFLTFFVRAVDGGSPQKESVVP 2689



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 38/146 (26%), Positives = 73/146 (50%), Gaps = 11/146 (7%)

Query: 43   LQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWL---SNDYGERFSISR-QGDIS 98
            + F +  +S + +E+ PV +++  +       L +  W      +Y  RF + +  G I 
Sbjct: 1357 IYFEEEFFSFTVMESDPVAHMIGVIAVEP---LGIPLWFDITGGNYDSRFDVDKGTGTII 1413

Query: 99   LMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLAD 158
            + + LD E + +Y  TV ATD   + S  V I V++ N+  P+F   +YE+ +P     D
Sbjct: 1414 VARHLDAEQKSNYNLTVEATDGTRSISTQVYIKVIDTNNHRPQFSASKYEVVIPE----D 1469

Query: 159  LTPGSVIGKVEAADGDKGDRVTLSLR 184
              P + I +V A D D+ +++  +++
Sbjct: 1470 TVPETEILQVSATDRDEKNKLIYTIQ 1495



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 74/275 (26%), Positives = 124/275 (45%), Gaps = 26/275 (9%)

Query: 29   ATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLS------ 82
            ++LIVS    +     F   EYS S  E+  V   +L +     RD+     ++      
Sbjct: 3215 SSLIVSVLDINDNPPVFEYREYSASVSEDTVVGTEVLQIHA-ASRDIEANAEITYSIVSG 3273

Query: 83   NDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDW 138
            N++G +FSI S  G I ++  LDYE+   Y  TV ATD     ++   TVNI+V ++ND 
Sbjct: 3274 NEHG-KFSIDSATGAIFIIDSLDYESSHEYYLTVEATDGGTPSLSDVVTVNINVTDINDN 3332

Query: 139  DPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSINDS- 196
             P F    Y   +    + + +  +V+   + ADG   + +  ++  G     F+I+ S 
Sbjct: 3333 TPVFSQDTYTAVISEDAMLEQSVITVMA--DDADGPSNNHIHYTITDGNQGNPFTIDPSR 3390

Query: 197  GHISIVD-LSALNTSTIQLVVVATDTGNPPRQASVPAIMHFPEAIVQQASSKLNSGTSST 255
            G I +   L     S   L V A+D GNPPR+ +    +   +  V       + G  S 
Sbjct: 3391 GEIKVTKLLDREKISGYTLTVQASDNGNPPRRNTTTVNIDVSD--VNDNPPVFSKGNYSI 3448

Query: 256  VLIILGVVLIVLGFVIILLILYIHKNKHTKNNGPP 290
            ++     +    GF ++ L++    +K + +NGPP
Sbjct: 3449 IIQENKPI----GFSVLQLVV---TDKDSSHNGPP 3476



 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 65/243 (26%), Positives = 111/243 (45%), Gaps = 23/243 (9%)

Query: 1    DINEDDFLQPITLVVRAIQY------DNQDRYALATLIVSKAGTSLRELQFSKNEYSVSA 54
            D  E   L P+    +A+ Y      D   R+  A +I++    +     F+ + YS++ 
Sbjct: 3076 DTGELKTLMPLDREQQAVYYLLMKATDGGGRFCQANIILTLEDVNDNAPVFTVDPYSITV 3135

Query: 55   LENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGERFSISR-QGDISLMQCLDYETEDS 110
             EN     +L  V     +   + ++ Y L N    +FSI    G I L + LD E +  
Sbjct: 3136 FENTEPKTLLTRVQATDADAGMNRKIHYSLVNSAEGQFSIDEFSGIIRLEKSLDRELQAV 3195

Query: 111  YRFTVYATDT----LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIG 166
            Y  T+ ATD      +++++++ +SV+++ND  P F Y +Y   +      D   G+ + 
Sbjct: 3196 YTLTLKATDEGLPRRLSSTSSLIVSVLDINDNPPVFEYREYSASVSE----DTVVGTEVL 3251

Query: 167  KVEAA--DGDKGDRVTLSL-RGPYEKMFSINDS-GHISIVD-LSALNTSTIQLVVVATDT 221
            ++ AA  D +    +T S+  G     FSI+ + G I I+D L   ++    L V ATD 
Sbjct: 3252 QIHAASRDIEANAEITYSIVSGNEHGKFSIDSATGAIFIIDSLDYESSHEYYLTVEATDG 3311

Query: 222  GNP 224
            G P
Sbjct: 3312 GTP 3314



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 40/145 (27%), Positives = 68/145 (46%), Gaps = 8/145 (5%)

Query: 90   SISRQGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYEL 149
            ++  +  + + + LD E +D Y   + ATD    T A V + V++ ND  P      Y  
Sbjct: 2972 NVQNEWKVYVKKSLDREEKDHYLLNITATDGTFATRAVVEVKVLDANDNSPVCEKALYTD 3031

Query: 150  FLPHIPLADLTPGSVIGKVEAADGD--KGDRVTLSLRGPYEKMFSIN-DSGHI-SIVDLS 205
             +P     D  PG +I +V A D D      +T +L GP  + F +  D+G + +++ L 
Sbjct: 3032 IVPE----DALPGKLIMQVSATDADIRSNAEITYTLHGPGAEKFRLTPDTGELKTLMPLD 3087

Query: 206  ALNTSTIQLVVVATDTGNPPRQASV 230
                +   L++ ATD G    QA++
Sbjct: 3088 REQQAVYYLLMKATDGGGRFCQANI 3112



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 54/194 (27%), Positives = 86/194 (44%), Gaps = 12/194 (6%)

Query: 12   TLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNY-VLLTVTTN 70
            TL V+A    N  R    T+ +  +  +     FSK  YS+   EN P+ + VL  V T+
Sbjct: 3408 TLTVQASDNGNPPRRNTTTVNIDVSDVNDNPPVFSKGNYSIIIQENKPIGFSVLQLVVTD 3467

Query: 71   KPRDLRVKYWL----SNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDT---LMT 123
            K        +L    S +    F ++ QG ++    L+ +  D Y   V  TD     ++
Sbjct: 3468 KDSSHNGPPFLFTILSGNEENTFQVNHQGILTTTAALNRKVRDHYLLHVKVTDNGKPPLS 3527

Query: 124  TSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSL 183
            +   V+I V+  + + P       E+F+      +   G VIGK+ A D D  D +T SL
Sbjct: 3528 SLTYVDIRVIEESIYAPAIL--PLEIFI--TAFGEEYSGGVIGKIHATDQDVYDTLTYSL 3583

Query: 184  RGPYEKMFSINDSG 197
                E MFS++ +G
Sbjct: 3584 DPKMESMFSVSSTG 3597



 Score = 51.2 bits (121), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 42/140 (30%), Positives = 70/140 (50%), Gaps = 16/140 (11%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSN-DYGERFSIS-RQGDISLMQC 102
            F K  YS    EN+ ++  ++ V  N P  L+V Y +++ D   +F I+   G I+++  
Sbjct: 2183 FEKPFYSAEIPENIQLHSPVVHVQANSPEGLKVFYSITDGDPFNQFMINFNTGVINVVAP 2242

Query: 103  LDYETEDSYRFTVYATDTLMTTSATVNISVV--NVNDWDPRFRYPQYELFLPHIPLADLT 160
            LD+E+  +Y+  + ATD+L    A V + ++  ++ND  P F    Y +         L+
Sbjct: 2243 LDFESHPAYKLNIRATDSLTGAHADVFVDIIVEDINDNPPMFTEQSYTV--------TLS 2294

Query: 161  PGSVIG----KVEAADGDKG 176
              SVIG    +V A D D G
Sbjct: 2295 EASVIGTSVLQVSATDADSG 2314



 Score = 47.8 bits (112), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 51/176 (28%), Positives = 83/176 (47%), Gaps = 30/176 (17%)

Query: 19   QYDNQDRYALATLIVSKAGTSLRELQFSK-----NEYSVSALENLPVNYVLLTVTTNKPR 73
            QY N+D   ++++ VS     +R+   +K     N Y    +EN+P    ++ V   K  
Sbjct: 2782 QYTNEDYNVISSVEVS---IQVRDANDNKPVLESNPYEAFIVENMPAGTRVIQV---KGT 2835

Query: 74   DL------RVKYWLSN----DYGERFSISRQ-GDISLMQCLDYETEDSYRFTVYATDT-- 120
            DL      +V Y L      D  E F+I+ + G I+ ++ LD+E  D Y+ TV A+D   
Sbjct: 2836 DLDSGLNGQVTYSLDPSQELDVIESFAINMETGWITTLKELDHEMRDKYKITVIASDRGE 2895

Query: 121  --LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGD 174
               +++ A V ++V +VND  PRF    Y+  +      D  PG +I  +   D D
Sbjct: 2896 KIQLSSLAVVEVTVTDVNDNPPRFTAEIYKGTVSE----DDPPGGIIAILSTTDAD 2947



 Score = 46.6 bits (109), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 62/247 (25%), Positives = 112/247 (45%), Gaps = 24/247 (9%)

Query: 4    EDDFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYV 63
            E++FL   T  VRA+   +  + ++  +        +   +FS+  YS    E++PV   
Sbjct: 2666 ENEFL---TFFVRAVDGGSPQKESVVPVYARILPPEVSLPKFSEPFYSYMVSEDIPVGTE 2722

Query: 64   LLTVTTNKPRDLRVKYWLSN----DYGERFSISRQ-GDISLMQCLDYETEDSYRFTVYA- 117
            +  +     + L       N    +    F I RQ G + L + LD+ET   Y+F+V A 
Sbjct: 2723 IDVIKAEHNQTLVYSLIKGNTPESNRDNFFVIDRQTGKLKLEKNLDHETTKWYQFSVVAQ 2782

Query: 118  ---TDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGD 174
                D  + +S  V+I V + ND  P      YE F+    + ++  G+ + +V+  D D
Sbjct: 2783 YTNEDYNVISSVEVSIQVRDANDNKPVLESNPYEAFI----VENMPAGTRVIQVKGTDLD 2838

Query: 175  KG--DRVTLSLRGPYE----KMFSIN-DSGHISIV-DLSALNTSTIQLVVVATDTGNPPR 226
             G   +VT SL    E    + F+IN ++G I+ + +L        ++ V+A+D G   +
Sbjct: 2839 SGLNGQVTYSLDPSQELDVIESFAINMETGWITTLKELDHEMRDKYKITVIASDRGEKIQ 2898

Query: 227  QASVPAI 233
             +S+  +
Sbjct: 2899 LSSLAVV 2905



 Score = 45.1 bits (105), Expect = 0.058,   Method: Compositional matrix adjust.
 Identities = 55/196 (28%), Positives = 90/196 (45%), Gaps = 22/196 (11%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTTNKPRDL----RVKYWLSNDYGERFSISR-QGDIS 98
            +F ++ Y V   EN  +N  ++ +     +DL     VKY L  D  ++F+I+   G + 
Sbjct: 822  EFLQDSYFVEVSENKELNSEIIQIEATD-KDLGANGEVKYSLLTD-TDKFAINAVTGVVK 879

Query: 99   LMQCLDYETEDSYRFTVYATDT-----LMTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
            ++  LD+E +  Y   + A D       + ++  + +S+ +VND  P+F    Y     H
Sbjct: 880  VVGLLDHEEQPVYFLKIEARDQPTEEPQLFSTVILKVSIEDVNDNPPKFIPSNY-----H 934

Query: 154  IPL-ADLTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSIND-SGHISIVD-LSALN 208
            + +  DL  G++I  +EA D D G   +V  SL    +  F ++  SG I IV  L    
Sbjct: 935  VKIREDLPEGTIITWLEAYDPDLGQSSQVRYSLLDSGDGTFDVDKLSGAIRIVQRLDYEK 994

Query: 209  TSTIQLVVVATDTGNP 224
                 L V A D G P
Sbjct: 995  KQLYNLTVRAKDKGKP 1010



 Score = 44.7 bits (104), Expect = 0.079,   Method: Compositional matrix adjust.
 Identities = 58/215 (26%), Positives = 89/215 (41%), Gaps = 19/215 (8%)

Query: 24  DRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLR---VKYW 80
           DR A A +++   G +    +F++  Y  S  EN+P+   ++ V+   P +     V Y 
Sbjct: 443 DRRATAKVLIKVLGMNSNPPEFTQTAYKASFDENVPIGTSVMRVSAKDPDEGENGYVTYS 502

Query: 81  LSNDYGERFSISR-QGDISLMQCLDYE-TEDSYRFTVYATDTLMTTSATVNISVV----N 134
           ++N     F I+   G IS  + LDYE     Y   + A+D  +     V + V     N
Sbjct: 503 IANLNPLPFVINHFSGIISTSEDLDYELMPRVYNLRIRASDWGIPYRREVEVPVTIILNN 562

Query: 135 VNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYE-KMFSI 193
           +ND  P F     E  +P     DL  G  I  V A D D+   V   +    E  +FS+
Sbjct: 563 LNDNIPLFEKINCEGTIPR----DLGVGEQITTVSAIDADELQLVRYQIESGNELDLFSL 618

Query: 194 NDSGHI-----SIVDLSALNTSTIQLVVVATDTGN 223
           N +  +     S+ D      S   L + ATD  N
Sbjct: 619 NPNSGVLSLKQSLTDGPGAKMSFHSLKITATDGEN 653



 Score = 40.8 bits (94), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 54/190 (28%), Positives = 83/190 (43%), Gaps = 28/190 (14%)

Query: 56   ENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGER-FSISRQ-GDISLMQCLDYETEDS 110
            E+ P+   ++TV+    ++ RD  ++Y + +  G   F I  + G I     LD ET   
Sbjct: 1046 EDAPIGSSVMTVSAYDEDEGRDGEIRYSIRDGSGMGVFRIDEEKGIIETADHLDRETTSH 1105

Query: 111  YRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGK 167
            Y  TVYATD     +++   + I V +VND  P+   P   ++ P +        SVI +
Sbjct: 1106 YWLTVYATDQGVVPLSSFIEIYIEVGDVNDNAPQTTEP---VYYPEVMENSPKDVSVI-Q 1161

Query: 168  VEAADGDKGDRVTLSLRGPYEKMFSINDSGHISIVDLSALNTSTIQ-----------LVV 216
            +EA D D      L+      K+ S N  G  SI   + L T+T +           L V
Sbjct: 1162 IEAFDPDSSSSEKLTY-----KITSGNPQGFFSINSKTGLITTTSRKLDREQQAEHILEV 1216

Query: 217  VATDTGNPPR 226
              TD G P +
Sbjct: 1217 TVTDNGIPAK 1226



 Score = 39.7 bits (91), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 59/226 (26%), Positives = 93/226 (41%), Gaps = 20/226 (8%)

Query: 44   QFSKNEYSVSALEN-LPVNYVLLTVTTNKPRDLRVKYWLSNDYG----ERFSIS-RQGDI 97
            QFS ++Y V   E+ +P   +L    T++    ++ Y + +       ++F +    G +
Sbjct: 1456 QFSASKYEVVIPEDTVPETEILQVSATDRDEKNKLIYTIQSSTDPISLKKFRLDPGTGSL 1515

Query: 98   SLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHI 154
               + LD+ET + +  TV   D    +    A + ++V + ND  P F    YE  +   
Sbjct: 1516 YTTEKLDHETMNQHVLTVMVRDQDVPVKRNYARIIVNVSDTNDHAPWFTSSSYEGRV--- 1572

Query: 155  PLADLTPGSVIGKVEAADGDKGDRVTLSLR---GPYEKMFSINDS-GHISIV-DLSALNT 209
                   GS + +V A D DKG    L      G     F I+   G I I  +L   N 
Sbjct: 1573 -YESAAVGSAVLQVTALDKDKGKNAELVYSIESGNIGNSFVIDPILGIIKIAKELDHSNQ 1631

Query: 210  STIQLVVVATDTGNPPRQASVPAIMHFPEAIVQQASSKLNSGTSST 255
                L+V ATD G+PP      A +H    +   AS K  +   ST
Sbjct: 1632 EEYNLMVKATDKGDPPMNEV--ASVHIFVTVSDNASPKFTAKEYST 1675


>gi|402880536|ref|XP_003903856.1| PREDICTED: cadherin-23 [Papio anubis]
          Length = 3354

 Score = 65.5 bits (158), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 60/195 (30%), Positives = 91/195 (46%), Gaps = 20/195 (10%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWLSNDYGERFSIS-RQGDISLM 100
            F +  Y  +  E++PV  V+LTVT           ++Y L +  G +F+I+   GDI ++
Sbjct: 2402 FDQPSYQEAVFEDVPVGTVILTVTATDADSGNFALIEYSLGDGEG-KFAINPTTGDIYVL 2460

Query: 101  QCLDYETEDSYRFTVYATDT-------LMTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
              LD E +D Y  T  A D            S  V I V++VND  P+F  PQ+   +  
Sbjct: 2461 SSLDREKKDHYILTALAKDNPGDVASNRRENSVQVVIQVLDVNDCRPQFSKPQFSTSV-- 2518

Query: 154  IPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIN-DSGHISIVDLSALNTS 210
                +   G+ +  + A D D+G    +T SL GP  + F ++ DSG ++       +  
Sbjct: 2519 --YENEPAGTSVITMMATDQDEGPNGELTYSLEGPGVEAFHVDMDSGLVT-TQRPLQSYE 2575

Query: 211  TIQLVVVATDTGNPP 225
               L VVATD G PP
Sbjct: 2576 RFNLTVVATDGGEPP 2590



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 68/218 (31%), Positives = 102/218 (46%), Gaps = 44/218 (20%)

Query: 45  FSKNEYSVSALENLPVNY-VLLTVTTNKPRDLRVKYWLSNDYGE-----------RFSI- 91
           FSK  Y VS +EN+     VL    T+  R        S +YG+           +F I 
Sbjct: 671 FSKPAYFVSVVENIMAGATVLFLNATDLDR--------SREYGQESIIYSLEGSAQFRIN 722

Query: 92  SRQGDISLMQCLDYETEDSYRFTVYATD-----TLMTTSATVNISVVNVNDWDPRFRYPQ 146
           +R G+I+    LD ET+  Y   V A D        T  ATVNI+++++ND  P ++   
Sbjct: 723 ARSGEITTTSLLDRETKSEYILIVRAVDGGVGHNQKTGIATVNITLLDINDNHPTWKDAP 782

Query: 147 YELFLPHIPLADLT-PGSVIGKVEAADGDKGDRVTL--SLRGPYEKMFSIND-SGHI--- 199
           Y     +I L ++T P S +  V A D D G+  TL  S++ P  K +S+N  +G I   
Sbjct: 783 Y-----YINLVEMTPPDSDVTTVVAVDPDLGENGTLVYSIQPP-NKFYSLNSTTGKIRTT 836

Query: 200 -SIVDLSALNTSTIQL----VVVATDTGNPPRQASVPA 232
            +++D    +    +L    VV  TD G PP +A+  A
Sbjct: 837 HAMLDRENPDPHEAELMRKIVVSVTDCGRPPLRATSSA 874



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 62/210 (29%), Positives = 99/210 (47%), Gaps = 28/210 (13%)

Query: 45  FSKNEYSVSALENLPVNYVLLTV--TTNKPRDL-RVKYWLSNDYGERFSISRQ-GDISLM 100
           FS+  Y++S  EN+ V   +LTV  T N       V Y+ S+D  +RFS+ +  G I L+
Sbjct: 460 FSQPLYNISLYENVTVGTSVLTVLATDNDAGTFGEVNYFFSDD-PDRFSLDKDTGLIMLI 518

Query: 101 QCLDYETEDSYRFTVYATDTL-MTTSATVNISVVNVNDWDPRFRYPQYELFL----PHIP 155
             LDYE    +  T+ A D     T+  V I+V++VND  P F+   Y   L    P + 
Sbjct: 519 ARLDYELIQRFTLTIIARDGGGEETTGRVRINVLDVNDNVPTFQKDAYVGALRENEPSV- 577

Query: 156 LADLTPGSVIGKVEAADGDK--GDRVTLSL-----RGPYEKMFSINDSGHISI---VDLS 205
                  + + ++ A D D    +++T S+      G Y  +      G IS+   +D  
Sbjct: 578 -------TQLVRLRATDEDSPPNNQITYSIVSASAFGSYFDISLYEGYGVISVSRPLDYE 630

Query: 206 ALNTSTIQLVVVATDTGNPPRQASVPAIMH 235
            ++   I L V+A D G+PP  ++VP  + 
Sbjct: 631 QISNGLIYLTVMAKDAGSPPLNSTVPVTIE 660



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 61/205 (29%), Positives = 92/205 (44%), Gaps = 27/205 (13%)

Query: 43   LQFSKNEYSVSALENLPVNYVLLTVTTNKPRDL-----RVKYWLSNDYGERFSISR-QGD 96
            +QFS   Y V+ LENL +   ++ V      +L     R   + S      F I    G 
Sbjct: 1311 VQFSNASYEVAILENLALGTEIVRVQAYSIDNLNQITYRFDAYTSTQAKALFKIDAITGV 1370

Query: 97   ISLMQCLDYETEDSYRFTVYATDTLMTTSATVN--ISVVNVNDWDPRFRY-PQYELFLPH 153
            I++   +D E  D Y  TV A D      +TV   I+V++ ND  PRF +     + +P 
Sbjct: 1371 ITVQGLVDREKGDFYTLTVVADDGGPKVDSTVKVYITVLDENDNSPRFDFISDSAISIPE 1430

Query: 154  IPLADLTPGSVIGKVEAADGDKGD--RVTLSLR-----GPYEKMFSINDS-GHISI---V 202
                D   G  +  V+A D D G   +V  SL      G +E + + NDS G + +   +
Sbjct: 1431 ----DCPVGQRVATVKARDPDAGSNGQVVFSLASGNIAGAFE-IVTTNDSIGEVFVARPL 1485

Query: 203  DLSALNTSTIQLVVVATDTGNPPRQ 227
            D   L+   ++  VVA+D G PPR+
Sbjct: 1486 DREELDHYILK--VVASDRGTPPRK 1508



 Score = 45.1 bits (105), Expect = 0.054,   Method: Compositional matrix adjust.
 Identities = 62/235 (26%), Positives = 106/235 (45%), Gaps = 45/235 (19%)

Query: 65   LTVTTNKPRDLRVKYWLS---NDYG---------------ERFSIS-RQGDISLMQCLDY 105
            ++V+ + PR+ RV  WL+   ND G                +FS+  R   +  +  LD 
Sbjct: 1002 VSVSEDVPREFRV-VWLNCTDNDVGLNAELSYFITGGNVDGKFSVGYRDAVVRTVVSLDR 1060

Query: 106  ETEDSYRFTVYATDT-----LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLT 160
            ET  +Y   + A D        T +ATV ++V++VND  P F    YE  +P     D+ 
Sbjct: 1061 ETTAAYMLILEAIDNGPVGKRHTGTATVFVTVLDVNDNRPIFLQSSYEASIPE----DIP 1116

Query: 161  PGSVIGKVEAADGDKGD--RVTLS-LRGPYEKMFSINDSGHISIVDLSALN---TSTIQL 214
             G  I +++A D D+G+  RV    L G +   F I+ S  + +     L+    S+  L
Sbjct: 1117 EGHSIVQLKATDADEGEFGRVWYRILHGNHGNNFRIHVSNGLLMRGPRPLDREQNSSHVL 1176

Query: 215  VVVATDTGNPPRQASVPAIMHFPE------AIVQQASSKLN----SGTSSTVLII 259
            +V A +    P ++SV  I++  +         QQ  S+L     +G  ++V+++
Sbjct: 1177 IVEAYNHDLGPMRSSVRVIVYVEDVNDEAPVFTQQQYSRLGLRETAGIGTSVIVV 1231



 Score = 43.9 bits (102), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 42/148 (28%), Positives = 69/148 (46%), Gaps = 19/148 (12%)

Query: 44  QFSKNEYSVSALENLPVNYVL--LTVTTNKPRDLRV----KYWLSNDYGERF-----SIS 92
           +F+ +EYSV+  E   V + L       +K  +L +    + +L  +    F     S+ 
Sbjct: 347 EFNSSEYSVAITELAQVGFALPLFIQVVDKDENLGLNSMFEVYLVGNNSHHFIISPTSVQ 406

Query: 93  RQGDISLMQC--LDYETEDSYRFTVYATDTL--MTTSATVNISVVNVNDWDPRFRYPQYE 148
            + DI +     LDYET D Y F ++A +++      A V I+++N ND  P F  P Y 
Sbjct: 407 GKADIRIRVAIPLDYETVDRYDFDLFANESVPDHVGYAKVKITLINENDNRPIFSQPLYN 466

Query: 149 LFLPHIPLADLTPGSVIGKVEAADGDKG 176
           + L      ++T G+ +  V A D D G
Sbjct: 467 ISL----YENVTVGTSVLTVLATDNDAG 490



 Score = 40.0 bits (92), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 59/207 (28%), Positives = 88/207 (42%), Gaps = 22/207 (10%)

Query: 27  ALATLIVSKAGTSLRELQFSKNEYSVSAL---ENLPVNYVLLTVTTNKPRDLR---VKYW 80
           A   +++S     +  L F  N +  + L   E+ PV     +VT    RD+    + + 
Sbjct: 12  AWLLVLISGCWGQVNRLPFFTNHFFDTYLLISEDTPVGS---SVTQLLARDMDNDPLVFG 68

Query: 81  LSNDYGERFSISR--QGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDW 138
           +S +   RF       G + L Q LD ET+  +      +D     +  VNI V +VND 
Sbjct: 69  VSGEEASRFFAVEPDTGVVWLRQPLDRETKSEFTVEFSVSDHQGVITRKVNIQVGDVNDN 128

Query: 139 DPRFRYPQYELFLPHIPLADLTP-GSVIGKVEAADGD--KGDRVTLSLRGPYEKMFSIND 195
            P F    Y + +P     + TP G+ I  V A D D   G  V  S + P  + F+I+ 
Sbjct: 129 APTFHNQPYSVRIP-----ENTPVGTPIFIVNATDPDLGAGGSVLYSFQPP-SQFFAIDS 182

Query: 196 SGHISIV--DLSALNTSTIQLVVVATD 220
           +  I  V  +L    T   QL V ATD
Sbjct: 183 ARGIVTVIRELDYETTQAYQLTVNATD 209



 Score = 39.7 bits (91), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 33/107 (30%), Positives = 49/107 (45%), Gaps = 8/107 (7%)

Query: 92   SRQGDISLMQCLDYETEDSYRFTVYATDTLMTTSAT---VNISVVNVNDWDPRFRYPQYE 148
            S  G +   + +DYE      FTV A+D      A    V + +V++ND +P F  P Y+
Sbjct: 2349 SSAGKVIANRTVDYEEVHWLNFTVRASDNGSPPRAAEIPVYLEIVDINDNNPIFDQPSYQ 2408

Query: 149  LFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSIN 194
              +      D+  G+VI  V A D D G+   +    G  E  F+IN
Sbjct: 2409 EAV----FEDVPVGTVILTVTATDADSGNFALIEYSLGDGEGKFAIN 2451



 Score = 39.7 bits (91), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 65/279 (23%), Positives = 114/279 (40%), Gaps = 54/279 (19%)

Query: 7    FLQPITLVVRA----IQYDNQDRYALATLIVSK-----AGTSL-----RELQFSKNEY-- 50
            F+ P+T  +R     I  + Q+ Y L  +   +     +GT++      ++  S+ E+  
Sbjct: 2117 FIHPVTGDIRVGNATIDREEQESYRLTVVATDRGTIPLSGTAIITILIEDINDSRPEFLN 2176

Query: 51   ---SVSALENLPVNYVLLTVTTNKPRDLRVKY--------------WLSNDYGERFSIS- 92
               +VS LE+     V+  VT    RDL  K                L  D  + F+++ 
Sbjct: 2177 PIQTVSVLESAEPGTVIANVTAID-RDLNPKLEYHIVGIVAKDDTDLLVPDQEDAFAVNI 2235

Query: 93   RQGDISLMQCLDYETEDSYRFTVYATD--------TLMTTSATVNISVVNVNDWDPRFRY 144
              G + +   L+ E   +Y  T+   D        ++   +A + ++V++VND  P+F+ 
Sbjct: 2236 NTGSVMVKSPLNRELVATYEVTLSVIDNASDLPERSVSVPNAKLTVNVLDVNDNTPQFKP 2295

Query: 145  PQYELFLPHIPLADLTPGSVIGKVEAADGDKG-----DRVTLSLRGPYEKMFSINDSGHI 199
                 +   I L   TPG+ +  V A D DKG         L L  P       + +G +
Sbjct: 2296 FGITYYTERI-LEGATPGTTLIAVAAVDPDKGLNGLVTYTLLDLVPPGYVQLEDSSAGKV 2354

Query: 200  ---SIVDLSALNTSTIQLVVVATDTGNPPRQASVPAIMH 235
                 VD   ++   +   V A+D G+PPR A +P  + 
Sbjct: 2355 IANRTVDYEEVHW--LNFTVRASDNGSPPRAAEIPVYLE 2391



 Score = 39.7 bits (91), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 39/120 (32%), Positives = 63/120 (52%), Gaps = 13/120 (10%)

Query: 123 TTSATVNISVVNVNDWDPRFRYPQYELFLPHIP-LADLTPGSV-IGKVEAADGDKGDRVT 180
           T+SATV ++++++ND DP F+       LP +  + + TP  V I +V A D D+G    
Sbjct: 871 TSSATVFVNLLDLNDNDPTFQN------LPFVAEVLEGTPAGVSIYQVVAIDLDEGLNSL 924

Query: 181 LSLRGP--YEKM-FSINDSGHISI--VDLSALNTSTIQLVVVATDTGNPPRQASVPAIMH 235
           +S R P    +M F IN S  + +   +L     +  QL VVA+D G P + ++    +H
Sbjct: 925 VSYRMPVGMPRMDFLINSSSGVVVTTTELDRERIAEYQLRVVASDAGTPTKSSTSTLTIH 984


>gi|11056024|ref|NP_061741.1| protocadherin gamma-A5 isoform 1 precursor [Homo sapiens]
 gi|37999838|sp|Q9Y5G8.1|PCDG5_HUMAN RecName: Full=Protocadherin gamma-A5; Short=PCDH-gamma-A5; Flags:
           Precursor
 gi|5456942|gb|AAD43719.1| protocadherin gamma A5 [Homo sapiens]
 gi|119582351|gb|EAW61947.1| hCG1982215, isoform CRA_z [Homo sapiens]
          Length = 931

 Score = 65.5 bits (158), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 62/197 (31%), Positives = 91/197 (46%), Gaps = 23/197 (11%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWLSND---YGERFSI-SRQGDI 97
           F+ +EYSVS  EN+PV   LL +T   P +    ++ Y   N+     E F + S  G+I
Sbjct: 242 FTPSEYSVSVPENIPVGTRLLMLTATDPDEGINGKLTYSFRNEEEKISETFQLDSNLGEI 301

Query: 98  SLMQCLDYETEDSYRFTVYATD-TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
           S +Q LDYE    Y   V A D   +  SA V ++V +VND  P       E+ L  +  
Sbjct: 302 STLQSLDYEESRFYLMEVVAQDGGALVASAKVVVTVQDVNDNAP-------EVILTSLTS 354

Query: 157 A---DLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMF----SINDSGH-ISIVDLSALN 208
           +   D  PG+VI      DGD G+   ++   P    F    S+++  H ++  DL    
Sbjct: 355 SISEDCLPGTVIALFSVHDGDSGENGEIACSIPRNLPFKLEKSVDNYYHLLTTRDLDREE 414

Query: 209 TSTIQLVVVATDTGNPP 225
           TS   + +   D G PP
Sbjct: 415 TSDYNITLTVMDHGTPP 431



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 74/285 (25%), Positives = 122/285 (42%), Gaps = 48/285 (16%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPR---DLRVKYWLSNDYGERFSISR-------Q 94
           F +  YS S  EN P    + +VT + P    + RV Y L+ D  +   +S         
Sbjct: 452 FPQASYSTSVTENNPRGVSIFSVTAHDPDSGDNARVTYSLAEDTFQGAPLSSYVSINSDT 511

Query: 95  GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFL 151
           G +  ++  DYE     +  V A+D+    ++++ ++++ V++ ND  P   YP     L
Sbjct: 512 GVLYALRSFDYEQLRDLQLWVTASDSGNPPLSSNVSLSLFVLDQNDNTPEILYPA----L 567

Query: 152 P-----HIPLADLT--PGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-DSGHI- 199
           P      + LA  +  PG ++ KV A D D G    LS   L+     +F++   +G + 
Sbjct: 568 PTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYRLLKASEPGLFAVGLHTGEVR 627

Query: 200 ---SIVDLSALNTSTIQLVVVATDTGNPPRQA----SVPAIMHFPEAIVQQASSKLNSGT 252
              +++D  AL  S   LVV   D G PP  A    +V      P+ +    S K     
Sbjct: 628 TARALLDRDALKQS---LVVAVEDHGQPPLSATFTVTVAVADRIPDILADLGSIKTPIDP 684

Query: 253 SSTVLII------LGVVLIVLGFVIILLILYI---HKNKHTKNNG 288
               L +        V  + L FVI+LL+L +   HK++  +  G
Sbjct: 685 EDLDLTLYLVVAVAAVSCVFLAFVIVLLVLRLRRWHKSRLLQAEG 729



 Score = 38.5 bits (88), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 44/142 (30%), Positives = 62/142 (43%), Gaps = 19/142 (13%)

Query: 103 LDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADL 159
           LD E    Y  T+   D     ++T + + + V +VND  P F    Y        + + 
Sbjct: 410 LDREETSDYNITLTVMDHGTPPLSTESHIPLKVADVNDNPPNFPQASYS-----TSVTEN 464

Query: 160 TP-GSVIGKVEAADGDKGD--RVTLSLR------GPYEKMFSIN-DSGHI-SIVDLSALN 208
            P G  I  V A D D GD  RVT SL        P     SIN D+G + ++       
Sbjct: 465 NPRGVSIFSVTAHDPDSGDNARVTYSLAEDTFQGAPLSSYVSINSDTGVLYALRSFDYEQ 524

Query: 209 TSTIQLVVVATDTGNPPRQASV 230
              +QL V A+D+GNPP  ++V
Sbjct: 525 LRDLQLWVTASDSGNPPLSSNV 546


>gi|432892794|ref|XP_004075840.1| PREDICTED: protocadherin Fat 3-like [Oryzias latipes]
          Length = 4611

 Score = 65.5 bits (158), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 61/186 (32%), Positives = 91/186 (48%), Gaps = 17/186 (9%)

Query: 50   YSVSALENLPVNYVLLTVTTNKPR---DLRVKYWLSNDYGERFSIS-RQGDISLMQCLDY 105
            Y+ S  E+LPV+ +LLTV         + +++Y L     + FSI    G++  +  LD+
Sbjct: 3062 YTASIPEDLPVHSLLLTVGATDADVGVNAQIQYSLHGSGSQDFSIDPDTGEVKSLVTLDH 3121

Query: 106  ETEDSYRFTVYATDTL-MTTSATVNISVVNVNDWDPRFRYPQY--ELFLPHIPLADLTPG 162
            E   SYR  V A D      SA + + V +VND  P F  PQY   ++   IP A LT  
Sbjct: 3122 EKTPSYRLVVQAMDGGGQWCSAEIQLVVTDVNDNPPIFTMPQYTANVYENTIPKALLT-- 3179

Query: 163  SVIGKVEAADGDK--GDRVTLSLRGPYEKMFSINDSGHISIVD--LSALNTSTIQLVVVA 218
                +++A D D+  G  V  SL      +FSI+    + I++  L     ST Q+ V A
Sbjct: 3180 ----RIQAIDPDEGPGRMVVYSLTDSAGGLFSIDHVSGVVILEHTLDREVQSTYQITVCA 3235

Query: 219  TDTGNP 224
            +D G+P
Sbjct: 3236 SDQGSP 3241



 Score = 57.8 bits (138), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 63/214 (29%), Positives = 98/214 (45%), Gaps = 19/214 (8%)

Query: 37   GTSLRELQFSKNEYSVSALENLPVNYVLLTV-TTNKPRD--LRVKYWLSNDYG-ERFSIS 92
            G +L    F ++ Y     EN  V   ++ V  T+K ++    + Y  +ND G ++FSI 
Sbjct: 2507 GANLHSPVFERSVYEAELRENAAVGTTVIQVKATDKDQEPFGHITYSFANDVGSDQFSID 2566

Query: 93   RQGDISLMQCLDYE--TEDSYRFTVYATDTLMTTS-ATVNISVVNVNDWDPRFRYPQYEL 149
              G I  ++ LD E          V A D     S  TV I++++ ND  P F   +Y+ 
Sbjct: 2567 SNGYICTVEKLDREDPANRDILLIVAAQDLGGRVSYCTVQITLLDDNDNSPSFVATEYQA 2626

Query: 150  FLPHIPLADLTPGSVIGKVEAADGDKGD--RVTLSL----RGPYEKMFSIN-DSG-HISI 201
             L H    D+T G ++ +++A D D G   +V  SL    R P   +  I+ D+G  ++ 
Sbjct: 2627 SLKH----DVTKGFLVTQLQAHDLDDGSNAKVRYSLYSEARVPVVDILEIDPDNGWMVTK 2682

Query: 202  VDLSALNTSTIQLVVVATDTGNPPRQASVPAIMH 235
               S L  S +   V A D G P R + VP  +H
Sbjct: 2683 GSFSHLRNSVLSFFVKAVDGGIPARHSLVPVYIH 2716



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 42/134 (31%), Positives = 67/134 (50%), Gaps = 8/134 (5%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWL-SNDYGERFSIS-RQGDISLMQC 102
            F K+ YSV   E++ V   ++++ +  P   ++ Y +   D   +F I    G IS++ C
Sbjct: 2205 FDKSFYSVYVNEDVEVYTPIISINSTSPEGQKIIYTIVDGDPSLQFDIGFDTGVISVIHC 2264

Query: 103  LDYETEDSYRFTVYATDTLMTTSATVNISVV--NVNDWDPRFRYPQYELFLPHIPLADLT 160
            LDYE   SY  TV ATD L    A V++ V   ++ND  P F+   Y + L    +    
Sbjct: 2265 LDYEVTSSYHLTVRATDYLTGAHAEVDLGVFIQDINDNPPIFQKMSYSVSLSETAMI--- 2321

Query: 161  PGSVIGKVEAADGD 174
             G+ + +V A+D D
Sbjct: 2322 -GTPVLQVIASDQD 2334



 Score = 51.6 bits (122), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 59/193 (30%), Positives = 90/193 (46%), Gaps = 21/193 (10%)

Query: 50   YSVSALENLPVNYVLLTVTTNKPRDL----RVKYWLSNDYGERFSISR-QGDISLMQCLD 104
            +   ALE+LPV  V+  + T+ P DL    +V++ L ND+   F + +  G I L + LD
Sbjct: 957  FKARALEDLPVGTVVAWLETHDP-DLGLGGQVRFSLVNDHNGWFELDKASGAIRLTKELD 1015

Query: 105  YETEDSYRFTVYATDT------LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLAD 158
            YET+  Y  TV A D       L  T   + +  VN N + P F +      L  +   +
Sbjct: 1016 YETQQFYNLTVKAKDKGRPVSLLSVTFVELEVIDVNENLYAPYFTH----FALTGVVKEN 1071

Query: 159  LTPGSVIGKVEAADGDKG--DRVTLSLR-GPYEKMFSIN-DSGHISIVDLSALNTS-TIQ 213
               G+ + +V A D D G    +  S+R G     FSI+ ++G I   D+    T  +  
Sbjct: 1072 ARIGTTLLQVSANDDDTGRDGEIHYSIRDGSGLGRFSIDEETGVIYTTDILDRETKDSYW 1131

Query: 214  LVVVATDTGNPPR 226
            L V A+D G  P+
Sbjct: 1132 LTVYASDRGVVPQ 1144



 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 62/198 (31%), Positives = 92/198 (46%), Gaps = 23/198 (11%)

Query: 56   ENLPVNYVLLTVTTNKP---RDLRVKYWLSNDYG-ERFSISRQ-GDISLMQCLDYETEDS 110
            EN  +   LL V+ N     RD  + Y + +  G  RFSI  + G I     LD ET+DS
Sbjct: 1070 ENARIGTTLLQVSANDDDTGRDGEIHYSIRDGSGLGRFSIDEETGVIYTTDILDRETKDS 1129

Query: 111  YRFTVYATDTLMT---TSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGK 167
            Y  TVYA+D  +    T+  V + V ++ND  P    P   L+ P +P       SVI +
Sbjct: 1130 YWLTVYASDRGVVPQFTTIDVFVQVEDINDNAPLTSEP---LYRPSVPENSPPDVSVI-Q 1185

Query: 168  VEAADGDKGDRVTLS------LRGPYEKMFSIN-DSGHISIVDLS---ALNTSTIQLVVV 217
            ++A D D     +L       + G  +  F+++  SG I+         L T  + L VV
Sbjct: 1186 IQAQDPDTSPSTSLHWLSYQIVSGNPQHFFNMDPHSGLITTTSHKLDRELQTEHV-LEVV 1244

Query: 218  ATDTGNPPRQASVPAIMH 235
             +D G  PRQ++V  I+ 
Sbjct: 1245 ISDGGPNPRQSTVLVIVQ 1262



 Score = 48.5 bits (114), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 64/247 (25%), Positives = 107/247 (43%), Gaps = 47/247 (19%)

Query: 11   ITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTN 70
            ++  V+A+      R++L  + +    +      FS++ YS +  EN P+  V+ TV  +
Sbjct: 2693 LSFFVKAVDGGIPARHSLVPVYIHVLSSEAFIPFFSQHHYSFNIPENTPIGSVIGTVRVS 2752

Query: 71   KPRD---LRVKYWLSNDYGERFSISRQ---------GDISLMQCLDYETEDSYRFTVYAT 118
             P +   L   +  +N  GE    +R+         G I L + LD+E    + F V AT
Sbjct: 2753 IPPEYSSLTATFATAN--GESGENNREMVFLVEKDTGVIKLDKALDHEAIKEFYFKVTAT 2810

Query: 119  ------DTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIG----KV 168
                  D++  TSA V ++V ++ND  P F    Y        +A +  G+ +G    +V
Sbjct: 2811 VKQAKLDSM--TSANVKVNVFDINDNRPAFETNSY--------VATVMEGTAVGTKVIRV 2860

Query: 169  EAADGDKGDRVTLSLR-----------GPYEKMFSIN-DSGHISI-VDLSALNTSTIQLV 215
            +A+D D G    ++ R            P   +F+I+ +SG I I  DL    +      
Sbjct: 2861 QASDPDSGANGQVTYRLGSLIKSKGNSEPLSDIFNIDSNSGWIFIRTDLDHETSPFYTFT 2920

Query: 216  VVATDTG 222
            VVA D G
Sbjct: 2921 VVALDHG 2927



 Score = 47.8 bits (112), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 41/124 (33%), Positives = 60/124 (48%), Gaps = 8/124 (6%)

Query: 103  LDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPG 162
            LD E  + Y   + ATD L  +   V ++V++ ND  P      Y   +P     DL   
Sbjct: 3018 LDREKRNFYLINITATDGLFVSQTKVEVTVMDANDNSPDCDQVMYTASIPE----DLPVH 3073

Query: 163  SVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIN-DSGHI-SIVDLSALNTSTIQLVVVA 218
            S++  V A D D G   ++  SL G   + FSI+ D+G + S+V L    T + +LVV A
Sbjct: 3074 SLLLTVGATDADVGVNAQIQYSLHGSGSQDFSIDPDTGEVKSLVTLDHEKTPSYRLVVQA 3133

Query: 219  TDTG 222
             D G
Sbjct: 3134 MDGG 3137



 Score = 43.9 bits (102), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 43/151 (28%), Positives = 76/151 (50%), Gaps = 13/151 (8%)

Query: 39   SLRELQFSKNEYSVSALENLPVNYVLLTVT---TNKPRDLRVKYWLSNDYGERFSISRQ- 94
            S + L FS++ Y+ + +EN  V  ++  V+   ++ P    ++   SN     F + +  
Sbjct: 1375 STQPLVFSESFYNFTVMENDKVAEIVGVVSLQWSSAPVWFDIRGGNSNSV---FDVEKAV 1431

Query: 95   GDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHI 154
            G I + + LD E    Y  TV ATD   T    V+I V++ ND DP F    YE     +
Sbjct: 1432 GTILIAKPLDAEQRSFYNLTVLATDGTHTAYTQVHILVLDNNDNDPIFSQQAYE-----V 1486

Query: 155  PLADLTP-GSVIGKVEAADGDKGDRVTLSLR 184
             +++ TP  + + ++ A+D D+ + +T SL+
Sbjct: 1487 TISEDTPTDTEVLQIVASDRDEHNELTYSLQ 1517



 Score = 42.7 bits (99), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 47/162 (29%), Positives = 76/162 (46%), Gaps = 24/162 (14%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWL------SNDYGERFSI-SRQ 94
            F K  YSVS  E   +   +L V     +  ++  ++Y +      S DY   F I S  
Sbjct: 2306 FQKMSYSVSLSETAMIGTPVLQVIASDQDSEKNNIIRYQIFSQLHNSTDY---FHIDSSS 2362

Query: 95   GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFL 151
            G I   + LD+E   +Y F V ATD     +++  TV +++ ++ND  P F    YE + 
Sbjct: 2363 GLILTARMLDHELAHNYYFVVRATDNGYPALSSEVTVTVTLNDMNDNAPVFNQLLYEAY- 2421

Query: 152  PHIPLADLTP-GSVIGKVEAADGDKG--DRVTLSLRGPYEKM 190
                +++L P G  I  V+A+D D    D++  S+    E+M
Sbjct: 2422 ----VSELAPRGHFITCVQASDADSSDFDKLEYSILSGNERM 2459



 Score = 41.6 bits (96), Expect = 0.65,   Method: Compositional matrix adjust.
 Identities = 56/193 (29%), Positives = 91/193 (47%), Gaps = 18/193 (9%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGERFSISR-QGDISLM 100
           FS++ Y V   E++PV   +LTV+    ++  +  + Y +S+     F I +  G IS  
Sbjct: 487 FSQSSYEVFVNESVPVGTNVLTVSATDEDRGENGYITYSISSLQPLPFKIDQFSGVISTS 546

Query: 101 QCLDYETE-DSYRFTVYATD----TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIP 155
             LD+E+  + + F V A+D        +   V I + NVND  P F     ++    + 
Sbjct: 547 SLLDFESSTEIFVFLVRASDWGSPYRRESEVNVTIHLENVNDNQPLFE----KVACQGVI 602

Query: 156 LADLTPGSVIGKVEAADGDKGDRVTLS-LRGPYEKMFSIN-DSGHISIVD-LSAL--NTS 210
            AD   G VI  V A D D+ + V    L G  +++F +N DSG +++   L++L     
Sbjct: 603 SADFPVGEVITTVSAIDIDELELVKYKILSGNEQRLFDLNPDSGVLTLGHPLTSLGPQKG 662

Query: 211 TIQLVVVATDTGN 223
              L + ATD  N
Sbjct: 663 VFSLKITATDGEN 675



 Score = 40.4 bits (93), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 68/231 (29%), Positives = 101/231 (43%), Gaps = 27/231 (11%)

Query: 27   ALATLIVSKAGTSLRELQFSKNEYSVSALENLP-VNYVLLTVTTNKPRDLRVKYWLSNDY 85
            AL TL V +A  S   L F+ N Y  S  ENLP +  V +        +  +KY L N  
Sbjct: 1985 ALVTLNVQEALDS--GLSFTHNIYYSSIKENLPNITKVAVVSAVGNHLNEPLKYSLLN-A 2041

Query: 86   GERFSISRQGDISLMQCLDYETEDSYRFTVYAT-----DTLMTTSATVNISVVNVNDWDP 140
            G  F I     +     + ++ E+   + + A      D        V + V ++ND  P
Sbjct: 2042 GTHFRIRPTSGVIQTTGIPFDREEQEFYELIAEAKREHDHRHVARVVVKVQVEDINDNFP 2101

Query: 141  RFRYPQYELFLPHIPLA--DLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIND- 195
             F      + LP+  +   D   GS I  V A DGDKG    VT  L+  ++  F IN  
Sbjct: 2102 VF------VGLPYYAVVQVDAEQGSHIFTVIAVDGDKGVNGEVTYHLKYDHDH-FEINQK 2154

Query: 196  SGHISIVDL--SALNTSTIQLVVVATDTGNPPRQASVPAIMHFPEAIVQQA 244
            +G IS+     S L+ +  Q+V+ A D G+ P  ++V     FP  +V +A
Sbjct: 2155 TGIISLKKSFESDLSNAEYQIVIYAKDGGDEPLSSTV----EFPITVVNKA 2201



 Score = 38.1 bits (87), Expect = 6.3,   Method: Compositional matrix adjust.
 Identities = 46/159 (28%), Positives = 68/159 (42%), Gaps = 15/159 (9%)

Query: 82   SNDYGERFSIS-RQGDISLMQCLDYETEDSYRFTVYATDTL---MTTSATVNISVVNVND 137
            S +   RF +    G I + Q LDYET   Y  TV A D     ++   TVNI++ +VND
Sbjct: 3305 SGNEHRRFHVHPHSGAIIVAQPLDYETCRDYFLTVEARDGGTPPLSAVTTVNINLTDVND 3364

Query: 138  WDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDK---GDRVTLSLRGPYEKMFSIN 194
              P F    Y  F+      D   G  + ++ A D D    G  +   + G     F I+
Sbjct: 3365 NAPMFSRDLYTAFVSE----DAFIGEFVVQLVAEDSDSHLNGAVLYSVVSGDQGSQFFID 3420

Query: 195  DSGHISIVDLSALNTSTI---QLVVVATDTGNPPRQASV 230
                +  V+   L+  TI    L + A D+G PP  ++ 
Sbjct: 3421 PINGVIKVN-KPLDRETIPSFSLTIRALDSGVPPMSSTA 3458


>gi|395821589|ref|XP_003784120.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 2 [Otolemur
           garnettii]
          Length = 2919

 Score = 65.5 bits (158), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 69/219 (31%), Positives = 101/219 (46%), Gaps = 22/219 (10%)

Query: 25  RYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWL 81
           R ALATL +    T+  +  F + EY  S  ENL V Y +LTV     + P +  + Y L
Sbjct: 267 RSALATLTIMVTDTNDHDPVFEQQEYKESLRENLEVGYEVLTVRATDGDAPLNANILYRL 326

Query: 82  SNDYG----ERFSIS-RQGDISLMQCLDYETEDSYRFTVYATDT-----LMTTSATVNIS 131
               G    E F I  R G I     +D E  +SY+ TV A+D        + +A V +S
Sbjct: 327 LEGIGGSPSEVFEIDPRSGVIRTRGPVDREEVESYQLTVEASDQGRDPGPRSATAAVFLS 386

Query: 132 VVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYE 188
           V + ND  P+F   +Y + +      D+TPG+ + +V A+D DKG    +    + G   
Sbjct: 387 VEDDNDNAPQFSEKRYVVQV----REDVTPGAPVLRVTASDRDKGSNALVHYSIMSGNAR 442

Query: 189 KMFSIN-DSGHISIVD-LSALNTSTIQLVVVATDTGNPP 225
             F ++  +G + +V  L    T    L V A D G PP
Sbjct: 443 GQFYLDAQTGALDVVSPLDYETTKEYTLRVRAQDGGRPP 481



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 49/171 (28%), Positives = 80/171 (46%), Gaps = 15/171 (8%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGERFSIS---RQGDIS 98
           F    +  + LE++P+ Y++L V     +   + R++Y L+   G  F  +     G IS
Sbjct: 503 FVSTPFQATVLESVPLGYLVLHVQAIDADAGDNARLEYRLAG-VGHDFPFTINNGTGWIS 561

Query: 99  LMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIP 155
           +   LD E  D Y F V A D     +T SA+V++++++VND +P F  P+Y + L    
Sbjct: 562 VAAELDREEVDFYSFGVEARDHGTPALTASASVSVTILDVNDNNPTFTQPEYTVRLNE-- 619

Query: 156 LADLTPGSVIGKVEAADGDKGDRVTLSL-RGPYEKMFSINDSGHISIVDLS 205
             D   G+ +  V A D D    +T  +  G     FSI       +V L+
Sbjct: 620 --DAAVGTSVVTVSAVDRDAHSVITYQITSGNTRNRFSITSQSGGGLVSLA 668



 Score = 44.7 bits (104), Expect = 0.071,   Method: Compositional matrix adjust.
 Identities = 50/189 (26%), Positives = 86/189 (45%), Gaps = 14/189 (7%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRDLR--VKYWL-SNDYGERFSISRQ---GDIS 98
           F++ EY+V   E+  V   ++TV+    RD    + Y + S +   RFSI+ Q   G +S
Sbjct: 608 FTQPEYTVRLNEDAAVGTSVVTVSAVD-RDAHSVITYQITSGNTRNRFSITSQSGGGLVS 666

Query: 99  LMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLAD 158
           L   LDY+ E  Y   V A+D     +A + ++V + N   P F+   Y + +      D
Sbjct: 667 LALPLDYKLERQYVLAVTASDGTRQDTAQIVVNVTDANTHRPVFQSSHYTVNVNE----D 722

Query: 159 LTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSINDSGHISI-VDLSALNTSTIQLV 215
              G+ +  + A D D G+  R+T  +     +     D+G ++   +L   +  +  L 
Sbjct: 723 RPAGTTVVLISATDEDTGENARITYFMEDSIPQFRIDADTGAVTTQAELDYEDQVSYTLA 782

Query: 216 VVATDTGNP 224
           + A D G P
Sbjct: 783 ITARDNGIP 791



 Score = 44.7 bits (104), Expect = 0.081,   Method: Compositional matrix adjust.
 Identities = 40/149 (26%), Positives = 69/149 (46%), Gaps = 10/149 (6%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWL-SNDYGERFSIS-RQGDISL 99
            F ++E+ V   EN P+   +  VT   P +    ++ Y +   +  E F +    G+++ 
Sbjct: 919  FEQDEFDVFVEENSPIGLAVARVTATDPDEGTNAQIMYQIVEGNIPEVFQLDIFSGELTA 978

Query: 100  MQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPH--IPLA 157
            +  LDYE    Y   + AT   + + ATV++ +++ ND  P      +E+   +     +
Sbjct: 979  LVDLDYEDRPEYVLVIQATSAPLVSRATVHVRLLDRNDNPPVLG--NFEILFNNYVTNRS 1036

Query: 158  DLTPGSVIGKVEAADGDKGDRVTLSL-RG 185
               PG  IG+V A D D  D +T S  RG
Sbjct: 1037 SSFPGGAIGRVPAHDPDISDSLTYSFERG 1065


>gi|355562512|gb|EHH19106.1| hypothetical protein EGK_19751 [Macaca mulatta]
          Length = 3359

 Score = 65.5 bits (158), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 60/195 (30%), Positives = 91/195 (46%), Gaps = 20/195 (10%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWLSNDYGERFSIS-RQGDISLM 100
            F +  Y  +  E++PV  V+LTVT           ++Y L +  G +F+I+   GDI ++
Sbjct: 2407 FDQPSYQEAVFEDVPVGTVILTVTATDADSGNFALIEYSLGDGEG-KFAINPTTGDIYVL 2465

Query: 101  QCLDYETEDSYRFTVYATDT-------LMTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
              LD E +D Y  T  A D            S  V I V++VND  P+F  PQ+   +  
Sbjct: 2466 SSLDREKKDHYILTALAKDNPGDVASNRRENSVQVVIQVLDVNDCRPQFSKPQFSTSV-- 2523

Query: 154  IPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIN-DSGHISIVDLSALNTS 210
                +   G+ +  + A D D+G    +T SL GP  + F ++ DSG ++       +  
Sbjct: 2524 --YENEPAGTSVITMMATDQDEGPNGELTYSLEGPGVEAFHVDMDSGLVT-TQRPLQSYE 2580

Query: 211  TIQLVVVATDTGNPP 225
               L VVATD G PP
Sbjct: 2581 RFNLTVVATDGGEPP 2595



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 63/210 (30%), Positives = 99/210 (47%), Gaps = 28/210 (13%)

Query: 45  FSKNEYSVSALENLPVNYVLLTV--TTNKPRDL-RVKYWLSNDYGERFSISRQ-GDISLM 100
           FS+  Y++S  EN+ V   +LTV  T N       V Y+ S+D  +RFS+ +  G I L+
Sbjct: 465 FSQPLYNISLYENVTVGTSVLTVLATDNDAGTFGEVNYFFSDD-PDRFSLDKDTGLIMLI 523

Query: 101 QCLDYETEDSYRFTVYATDTL-MTTSATVNISVVNVNDWDPRFRYPQYELFL----PHIP 155
             LDYE    +  T+ A D     T+  V I+V++VND  P F+   Y   L    P + 
Sbjct: 524 ARLDYELIQRFTLTIIARDGGGEETTGRVRINVLDVNDNVPTFQKDAYVGALRENEPSV- 582

Query: 156 LADLTPGSVIGKVEAADGDK--GDRVTLSL-----RGPYEKMFSINDSGHISI---VDLS 205
                  + + ++ A D D    +++T S+      G Y  +      G IS+   +D  
Sbjct: 583 -------TQLVRLRATDEDSPPNNQITYSIVSASAFGSYFDISLYEGYGVISVSRPLDYE 635

Query: 206 ALNTSTIQLVVVATDTGNPPRQASVPAIMH 235
            ++   I L V+A D GNPP  ++VP  + 
Sbjct: 636 QISNGLIYLTVMAKDAGNPPLNSTVPVTIE 665



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 68/218 (31%), Positives = 103/218 (47%), Gaps = 44/218 (20%)

Query: 45  FSKNEYSVSALENLPVNY-VLLTVTTNKPRDLRVKYWLSNDYGE-----------RFSI- 91
           FSK  Y VS +EN+     VL    T+  R        S +YG+           +F I 
Sbjct: 676 FSKPAYFVSVVENIMAGATVLFLNATDLDR--------SREYGQESIIYSLEGSAQFRIN 727

Query: 92  SRQGDISLMQCLDYETEDSYRFTVYATD-----TLMTTSATVNISVVNVNDWDPRFRYPQ 146
           +R G+I+    LD ET+  Y   V A D        T  ATVNI+++++ND  P ++   
Sbjct: 728 ARSGEITTTSLLDRETKSEYILIVRAVDGGVGHNQKTGIATVNITLLDINDNHPTWKDAP 787

Query: 147 YELFLPHIPLADLT-PGSVIGKVEAADGDKGDRVTL--SLRGPYEKMFSIND-SGHI--- 199
           Y     +I L ++T P S +  V A D D G+  TL  S++ P  K +S+N  +G I   
Sbjct: 788 Y-----YINLVEMTPPDSDVTTVVAVDPDLGENGTLVYSIQPP-NKFYSLNGTTGKIRTT 841

Query: 200 -SIVDLSALNTSTIQL----VVVATDTGNPPRQASVPA 232
            +++D    ++   +L    VV  TD G PP +A+  A
Sbjct: 842 HAMLDRENPDSHEAELMRKIVVSVTDCGRPPLRATSSA 879



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 61/205 (29%), Positives = 92/205 (44%), Gaps = 27/205 (13%)

Query: 43   LQFSKNEYSVSALENLPVNYVLLTVTTNKPRDL-----RVKYWLSNDYGERFSISR-QGD 96
            +QFS   Y V+ LENL +   ++ V      +L     R   + S      F I    G 
Sbjct: 1316 VQFSNASYEVAILENLALGTEIVRVQAYSIDNLNQIMYRFDAYTSTQAKALFKIDAITGV 1375

Query: 97   ISLMQCLDYETEDSYRFTVYATDTLMTTSATVN--ISVVNVNDWDPRFRY-PQYELFLPH 153
            I++   +D E  D Y  TV A D      +TV   I+V++ ND  PRF +     + +P 
Sbjct: 1376 ITVQGLVDREKGDFYTLTVVADDGGPKVDSTVQVYITVLDENDNSPRFDFISDSAISIPE 1435

Query: 154  IPLADLTPGSVIGKVEAADGDKGD--RVTLSL-----RGPYEKMFSINDS-GHISI---V 202
                D   G  +  V+A D D G   +V  SL      G +E + + NDS G + +   +
Sbjct: 1436 ----DCPVGQRVATVKARDPDAGSNGQVVFSLASGNIAGAFE-IVTTNDSIGEVFVARPL 1490

Query: 203  DLSALNTSTIQLVVVATDTGNPPRQ 227
            D   L+   ++  VVA+D G PPR+
Sbjct: 1491 DREELDHYILK--VVASDRGTPPRK 1513



 Score = 45.1 bits (105), Expect = 0.064,   Method: Compositional matrix adjust.
 Identities = 59/207 (28%), Positives = 91/207 (43%), Gaps = 17/207 (8%)

Query: 27  ALATLIVSKAGTSLRELQFSKNEYSVSAL---ENLPVNYVLLTVTTNKPRDLR---VKYW 80
           A   +++S     +  L F  N +  + L   E+ PV     +VT    RD+    + + 
Sbjct: 12  AWLLVLISGCWGQVNRLPFFTNHFFDTYLLISEDTPVGS---SVTQLLARDMDNDPLVFG 68

Query: 81  LSNDYGERFSISR--QGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDW 138
           +S +   RF       G + L Q LD ET+  +      +D     +  VNI V +VND 
Sbjct: 69  VSGEEASRFFAVEPDTGVVWLRQPLDRETKSEFTVEFSVSDHQGVITRKVNIQVGDVNDN 128

Query: 139 DPRFRYPQYELFLPHIPLADLTP-GSVIGKVEAADGD--KGDRVTLSLRGPYEKMFSIND 195
            P F    Y + +P +     TP G+ I  V A D D   G  V  S + P  + F+I+ 
Sbjct: 129 APTFHNQPYSVRIPEVGATRNTPVGTPIFIVNATDPDLGAGGSVLYSFQPP-SQFFAIDS 187

Query: 196 S-GHISIV-DLSALNTSTIQLVVVATD 220
           + G I+++ +L    T   QL V ATD
Sbjct: 188 ARGIITVIRELDYETTQAYQLTVNATD 214



 Score = 44.7 bits (104), Expect = 0.074,   Method: Compositional matrix adjust.
 Identities = 62/235 (26%), Positives = 106/235 (45%), Gaps = 45/235 (19%)

Query: 65   LTVTTNKPRDLRVKYWLS---NDYG---------------ERFSIS-RQGDISLMQCLDY 105
            ++V+ + PR+ RV  WL+   ND G                +FS+  R   +  +  LD 
Sbjct: 1007 VSVSEDVPREFRV-VWLNCTDNDVGLNAELSYFITGGNVDGKFSVGYRDAVVRTVVSLDR 1065

Query: 106  ETEDSYRFTVYATDT-----LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLT 160
            ET  +Y   + A D        T +ATV ++V++VND  P F    YE  +P     D+ 
Sbjct: 1066 ETTAAYMLILEAIDNGPVGKRHTGTATVFVTVLDVNDNRPIFLQSSYEASVPE----DIP 1121

Query: 161  PGSVIGKVEAADGDKGD--RVTLS-LRGPYEKMFSINDSGHISIVDLSALN---TSTIQL 214
             G  I +++A D D+G+  RV    L G +   F I+ S  + +     L+    S+  L
Sbjct: 1122 EGHSIVQLKATDADEGEFGRVWYRILHGNHGNNFRIHVSNGLLMRGPRPLDRERNSSHVL 1181

Query: 215  VVVATDTGNPPRQASVPAIMHFPE------AIVQQASSKLN----SGTSSTVLII 259
            +V A +    P ++SV  I++  +         QQ  S+L     +G  ++V+++
Sbjct: 1182 IVEAYNHDLGPMRSSVRVIVYVEDVNDEAPVFTQQQYSRLGLRETAGIGTSVIVV 1236



 Score = 44.3 bits (103), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 41/146 (28%), Positives = 68/146 (46%), Gaps = 17/146 (11%)

Query: 44  QFSKNEYSVSALENLPVNYVL----LTVTTNKPRDLRVKYWLSNDYGERF-----SISRQ 94
           +F+ +EYSV+  E   V + L      V  ++  +   + +L  +    F     S+  +
Sbjct: 354 EFNSSEYSVAITELAQVGFALPLFIQVVDKDEGLNSMFEVYLVGNNSHHFIISPTSVQGK 413

Query: 95  GDISLMQC--LDYETEDSYRFTVYATDTL--MTTSATVNISVVNVNDWDPRFRYPQYELF 150
            DI +     LDYET D Y F ++A +++      A V I+++N ND  P F  P Y + 
Sbjct: 414 ADIRIRVAIPLDYETVDRYDFDLFANESVPDHVGYAKVKITLINENDNRPIFSQPLYNIS 473

Query: 151 LPHIPLADLTPGSVIGKVEAADGDKG 176
           L      ++T G+ +  V A D D G
Sbjct: 474 L----YENVTVGTSVLTVLATDNDAG 495



 Score = 40.0 bits (92), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 47/150 (31%), Positives = 70/150 (46%), Gaps = 22/150 (14%)

Query: 103 LDYETEDSY------RFTVYATDT-----LMTTSATVNISVVNVNDWDPRFR-YPQYELF 150
           LD E  DS+      +  V  TD        T+SATV ++++++ND DP F+  P     
Sbjct: 845 LDRENPDSHEAELMRKIVVSVTDCGRPPLRATSSATVFVNLLDLNDNDPTFQNLPFVAEV 904

Query: 151 LPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGP--YEKM-FSINDSGHISI--VDLS 205
           L  IP      G  I +V A D D+G    +S R P    +M F IN S  + +   +L 
Sbjct: 905 LEGIP-----AGVSIYQVVAIDLDEGLNGLVSYRMPVGMPRMDFLINSSSGVVVTTTELD 959

Query: 206 ALNTSTIQLVVVATDTGNPPRQASVPAIMH 235
               +  QL VVA+D G P + ++    +H
Sbjct: 960 RERIAEYQLRVVASDAGTPTKSSTSTLTIH 989



 Score = 40.0 bits (92), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 66/279 (23%), Positives = 114/279 (40%), Gaps = 54/279 (19%)

Query: 7    FLQPITLVVRA----IQYDNQDRYALATLIVSK-----AGTSL-----RELQFSKNEY-- 50
            F+ P+T V+R     I  + Q+ Y L  +   +     +GT++      ++  S  E+  
Sbjct: 2122 FIHPVTGVIRVGNATIDREEQESYRLTVVATDRGTVPLSGTAIITILIEDINDSCPEFLN 2181

Query: 51   ---SVSALENLPVNYVLLTVTTNKPRDLRVKY--------------WLSNDYGERFSIS- 92
               +VS LE+     V+  VT    RDL  K                L  D  + F+++ 
Sbjct: 2182 PIQTVSVLESAEPGTVIANVTAID-RDLNPKLEYHIVGIVAKDDTDLLVPDQEDVFAVNI 2240

Query: 93   RQGDISLMQCLDYETEDSYRFTVYATD--------TLMTTSATVNISVVNVNDWDPRFRY 144
              G + +   L+ E   +Y  T+   D        ++   +A + ++V++VND  P+F+ 
Sbjct: 2241 NTGSVMVKSPLNRELVATYEVTLSVIDNASDLPERSVSVPNAKLTVNVLDVNDNTPQFKP 2300

Query: 145  PQYELFLPHIPLADLTPGSVIGKVEAADGDKG-----DRVTLSLRGPYEKMFSINDSGHI 199
                 +   I L   TPG+ +  V A D DKG         L L  P       + +G +
Sbjct: 2301 FGITYYTERI-LEGATPGTTLIAVAAVDPDKGLNGLVTYTLLDLVPPGYVQLEDSSAGKV 2359

Query: 200  ---SIVDLSALNTSTIQLVVVATDTGNPPRQASVPAIMH 235
                 VD   ++   +   V A+D G+PPR A +P  + 
Sbjct: 2360 IANRTVDYEEVHW--LNFTVRASDNGSPPRAAEIPVYLE 2396



 Score = 39.7 bits (91), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 33/107 (30%), Positives = 49/107 (45%), Gaps = 8/107 (7%)

Query: 92   SRQGDISLMQCLDYETEDSYRFTVYATDTLMTTSAT---VNISVVNVNDWDPRFRYPQYE 148
            S  G +   + +DYE      FTV A+D      A    V + +V++ND +P F  P Y+
Sbjct: 2354 SSAGKVIANRTVDYEEVHWLNFTVRASDNGSPPRAAEIPVYLEIVDINDNNPIFDQPSYQ 2413

Query: 149  LFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSIN 194
              +      D+  G+VI  V A D D G+   +    G  E  F+IN
Sbjct: 2414 EAV----FEDVPVGTVILTVTATDADSGNFALIEYSLGDGEGKFAIN 2456


>gi|321458298|gb|EFX69368.1| hypothetical protein DAPPUDRAFT_329129 [Daphnia pulex]
          Length = 5030

 Score = 65.5 bits (158), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 63/238 (26%), Positives = 111/238 (46%), Gaps = 34/238 (14%)

Query: 14   VVRAIQYDNQDRYALATL-------IVSKAGTSL--------RELQFSKNEYSVSALENL 58
            V+R++  + Q RY +  +       +++  GT L           +FS+++Y    +EN 
Sbjct: 2355 VLRSLDRETQSRYEIIVVAMDSGVPVLTGTGTVLIFVEDINDHSPEFSQSQYRSDVVENG 2414

Query: 59   PVNYVLLTVTT---NKPRDLRVKYWLSNDYGERFSI-SRQGDISLMQCLDYETEDSYRFT 114
            P+   +  V+    +   +  ++Y L ND  ++F I S  G+I     LD E    Y   
Sbjct: 2415 PIGLSVTKVSAFDNDSGENALIRYQLKNDK-DKFRIDSSTGEIFTQTKLDREERSKYELV 2473

Query: 115  VYATDTLMTTSATVNISVV----NVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEA 170
            V A+D+ +T + T  ++V+    +VND  P FR     +++P     ++ PG  +    A
Sbjct: 2474 VVASDSSLTNTRTTEVNVILFVNDVNDHPPIFREMVDIIYIPD----NIQPGQFVLGANA 2529

Query: 171  ADGDKG--DRVTLSLRGPYEKMFSIN-DSGHISIVDL---SALNTSTIQLVVVATDTG 222
             D D G   ++   L G     FS+N D+G I    L   SA  ++T +L + A+D+G
Sbjct: 2530 VDADVGLNGKIVYHLFGDDASKFSVNQDTGVIKASTLLASSASKSATFKLEIRASDSG 2587



 Score = 58.5 bits (140), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 42/146 (28%), Positives = 70/146 (47%), Gaps = 11/146 (7%)

Query: 45   FSKNEYSVSALENLPVN---YVLLTVTTNKPRDLRVKYWLS-NDYGERFSISRQGDISLM 100
            F  + Y  S LE + VN   + L  +  +K  + RV Y++S  +   +F I   G + + 
Sbjct: 1019 FEYSSYETSLLETISVNERFFALSAMDRDKGANGRVSYFISEGNEAVKFGIFPDGMLYVK 1078

Query: 101  QCLDYETEDSYRFTVYATDTLM---TTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLA 157
              LD E +D Y  TV A D  M   ++S +V I +++ ND  P+F    +  ++P     
Sbjct: 1079 SPLDREAKDYYALTVVAEDGGMPPRSSSVSVTIHIIDENDNPPKFNNETFSFYIPE---- 1134

Query: 158  DLTPGSVIGKVEAADGDKGDRVTLSL 183
            +  P S +G++ A D D G    L+ 
Sbjct: 1135 NEAPDSYVGRLTATDRDVGRNAELTF 1160



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 64/231 (27%), Positives = 105/231 (45%), Gaps = 26/231 (11%)

Query: 13   LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKP 72
            L+V A+      R   AT+ V+ A  +    +F++  +SV+  EN  +   ++ VT++  
Sbjct: 2794 LIVEAVDQGAPQRSGTATVSVTVADKNDNPPRFTR-LFSVNVTENAAIGTFVIQVTSSD- 2851

Query: 73   RDLRVK----YWLSNDYGERFSISR-QGDISLMQCLDYETEDSYRFTVYATDTLMTTSAT 127
            RD+ V     Y  + +   +F I    G++++   +D E+++ Y   V A D        
Sbjct: 2852 RDIGVNANATYSFTENPTGKFRIDPVSGNVTVAGVIDRESKEEYLLKVSAVDGSWRAETP 2911

Query: 128  VNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPG-SVIGKVEAADGDK---GDRVTLSL 183
            + I+V + ND  P F +  Y         A+L    + +G+V AAD DK      +T S+
Sbjct: 2912 LTITVQDQNDNAPEFEHSFYSF-----NFAELQRNVAFVGQVTAADRDKQGPNAMITYSI 2966

Query: 184  RGPYEKMFSIN-DSGHI---SIVDLSALNTST-----IQLVVVATDTGNPP 225
            + P E  FSI+  SG I     V     N  +       L +VATD G PP
Sbjct: 2967 KHPSE-FFSIDLTSGEILSKQTVRYKHTNKGSSPENMYTLWIVATDNGKPP 3016



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 59/195 (30%), Positives = 89/195 (45%), Gaps = 15/195 (7%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVT-TNKPRDLRVKYWL-SNDYGERFSISRQGDISLMQC 102
            F  +   +S  E+L +   + TVT T+  +   V Y L S D G+    S +G ++L   
Sbjct: 1777 FRDDNAVISVSEDLIIGQPITTVTATDLDKTGTVVYTLVSGDDGKFTLESAKGILTLRDN 1836

Query: 103  LDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPG 162
            LD E +  Y+ T+ A D    T   + I V++ ND  P F    Y   +P     D   G
Sbjct: 1837 LDREFQSQYKLTIKADDGEQFTETVLIIKVIDTNDNSPTFSEAAYSFDIPE----DTGRG 1892

Query: 163  SVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-DSGHISIVDLSALNTSTIQ---LV 215
            + +G V A D D+G    +S   L      +FS+N  SG  ++   S L+   +Q    V
Sbjct: 1893 AFVGAVVANDMDEGINAQVSYTVLSDWGNDVFSLNPQSGVFTLT--SRLDYEQVQHYIFV 1950

Query: 216  VVATDTGNPPRQASV 230
            V A DTG P   ++V
Sbjct: 1951 VQAQDTGRPSLSSTV 1965



 Score = 51.6 bits (122), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 47/157 (29%), Positives = 75/157 (47%), Gaps = 19/157 (12%)

Query: 76   RVKYWLSNDYGERFSIS-RQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNIS 131
            RV+Y + +     F ++   G+IS+++ LD ET+  Y   V A D+   ++T + TV I 
Sbjct: 2331 RVRYLIKDGDKGLFRVNGTTGEISVLRSLDRETQSRYEIIVVAMDSGVPVLTGTGTVLIF 2390

Query: 132  VVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIG----KVEAADGDKGDR--VTLSLRG 185
            V ++ND  P F   QY         +D+     IG    KV A D D G+   +   L+ 
Sbjct: 2391 VEDINDHSPEFSQSQYR--------SDVVENGPIGLSVTKVSAFDNDSGENALIRYQLKN 2442

Query: 186  PYEKMFSINDSGHI-SIVDLSALNTSTIQLVVVATDT 221
              +K    + +G I +   L     S  +LVVVA+D+
Sbjct: 2443 DKDKFRIDSSTGEIFTQTKLDREERSKYELVVVASDS 2479



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 72/261 (27%), Positives = 107/261 (40%), Gaps = 40/261 (15%)

Query: 6    DFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLREL--------------QFSKNEYS 51
            D +  +    + I  + Q  Y L  LIV+++G S   +              +F K    
Sbjct: 861  DEITGVLTTAKRIDREKQSHYQL--LIVARSGFSYGTVSVNVTVQDVNDNPPRFDKTRAV 918

Query: 52   VSALENLPVNYVLLTVTTNKPRDL------RVKYWLSNDYGERFSISRQ-GDISLMQCLD 104
               +EN P N+ +      K  DL      R+ Y L+ +  E F+IS   G I L + L 
Sbjct: 919  ARVVENWPANHEIYLA---KAEDLDTGNNSRITYSLTLNPHELFTISPTLGMIYLNRPLQ 975

Query: 105  YET---EDSYRFTVYATDTL---MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLAD 158
            +E    E S    V ATD     +++   V +++ +VND  P F Y  YE  L    L  
Sbjct: 976  HEQFYFESSLTLEVTATDDGSPPLSSRQLVTLNLEDVNDHTPVFEYSSYETSL----LET 1031

Query: 159  LTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKM-FSINDSGHISIVD-LSALNTSTIQL 214
            ++       + A D DKG   RV+  +    E + F I   G + +   L         L
Sbjct: 1032 ISVNERFFALSAMDRDKGANGRVSYFISEGNEAVKFGIFPDGMLYVKSPLDREAKDYYAL 1091

Query: 215  VVVATDTGNPPRQASVPAIMH 235
             VVA D G PPR +SV   +H
Sbjct: 1092 TVVAEDGGMPPRSSSVSVTIH 1112



 Score = 47.8 bits (112), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 52/186 (27%), Positives = 82/186 (44%), Gaps = 16/186 (8%)

Query: 61   NYVLLTVTTNKPRDL---RVKYWLSN-DYGERFSI-SRQGDISLMQCLDYETEDSYRFTV 115
            N V  TV    P+      ++Y ++  + G+ F I S+ G++S+   LDYE    Y   +
Sbjct: 2625 NRVFTTVIATSPKTGAAGEIQYGIAGGNTGDVFQINSKTGEVSIGTGLDYEISTQYELWI 2684

Query: 116  YATDTLMTTSATVN---ISVVNVNDWDPRFRYPQY--ELFLPHIPLADLTPGSVIGKVEA 170
             A D+   + A+V    I+V + ND  P F +  Y   +     P + L    ++  V A
Sbjct: 2685 EARDSDDISLASVTRLLINVTDFNDNSPIFHHAIYYASILEEQFPPSPLMSSQLVLTVHA 2744

Query: 171  ADGDKGD----RVTLSLRGPYEKMFSIN-DSGHI-SIVDLSALNTSTIQLVVVATDTGNP 224
             D D G     R  L   G  +  FS++ +SG I + V L   +     L+V A D G P
Sbjct: 2745 TDLDSGRNGLVRYQLRNSGDLDNAFSVDAESGKIYTNVKLDREDVGHYVLIVEAVDQGAP 2804

Query: 225  PRQASV 230
             R  + 
Sbjct: 2805 QRSGTA 2810



 Score = 46.6 bits (109), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 44/162 (27%), Positives = 75/162 (46%), Gaps = 14/162 (8%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNK----PRDLRVKYWLSNDYGERFSIS-RQGDISL 99
            F+   Y +   EN P+  ++++VT +     P  +     +S +   +F I    GDIS+
Sbjct: 3149 FTALSYQIIVQENEPLGSIIVSVTASDNDSGPNGVVHYAIVSGNEENKFLIDPNTGDISV 3208

Query: 100  MQCLDYETEDSYRFTVYATDTLMT---TSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
               LD++T   +   + ATD        +AT+ + + +VND  PRF    Y+ F+     
Sbjct: 3209 ANTLDFDTLPKFTLNITATDMGFEPKLATATLTVLLTDVNDNPPRFNQSHYDGFVRE--- 3265

Query: 157  ADLTPGSVIGKVEAADGD--KGDRVTLSLRGPYEKMFSINDS 196
             +L P +++  +EA D D  K   +  S+ G   K F   DS
Sbjct: 3266 -NLPPDTLVMDLEAFDADSAKNGIIQYSIIGGNGKDFFTIDS 3306



 Score = 45.8 bits (107), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 41/180 (22%), Positives = 83/180 (46%), Gaps = 13/180 (7%)

Query: 6    DFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLL 65
            D L   TL + A     + + A ATL V     +    +F+++ Y     ENLP + +++
Sbjct: 3215 DTLPKFTLNITATDMGFEPKLATATLTVLLTDVNDNPPRFNQSHYDGFVRENLPPDTLVM 3274

Query: 66   TVT---TNKPRDLRVKYWLSNDYGERFSI--SRQGDISLMQCLDYETEDSYRFTVYAT-- 118
             +     +  ++  ++Y +    G+ F    S  G ++     D+E ++ Y   V A+  
Sbjct: 3275 DLEAFDADSAKNGIIQYSIIGGNGKDFFTIDSETGVVTTKSSFDFEEKNYYELDVLASNP 3334

Query: 119  DTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPH-IPLADLTPGSVIGKVEAADGDKGD 177
            D+ M  S  V + +   N++ P+F  P ++  +   +P+     G+ +G ++A D D G+
Sbjct: 3335 DSSMFGSTVVRVHITGRNEFFPKFVQPVFQFTVSESVPV-----GASVGIIQATDRDNGE 3389



 Score = 45.4 bits (106), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 57/216 (26%), Positives = 96/216 (44%), Gaps = 27/216 (12%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGERFSISRQGDISLMQ 101
           F  ++Y VS  E++P    ++ VT    +   + RV Y++S    +    +  G I+  +
Sbjct: 259 FDHSDYVVSLNESVPPGTHVMQVTATDNDAGENARVTYYISESETQFAVDAETGVITTTE 318

Query: 102 CLDYE---------TEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDP--RFRY-PQ 146
            L+ +            S  FTV+A D           V +++++ ND DP  RFRY P 
Sbjct: 319 QLNCQRSCPQLVSSCNKSCVFTVFARDHGNPRQDGRTYVTVNLLDANDHDPIIRFRYFPA 378

Query: 147 YELFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKM-FSINDSGHISIVD 203
              F      A    GSV+  V   D D+G     T+ ++   E + F + ++    IV 
Sbjct: 379 TADFATVDENAQ--NGSVVAAVSVIDFDEGANGETTVEIKAGNELVHFRLEETPSFHIVR 436

Query: 204 LSAL----NTSTIQLVVVATDTGNPPRQASVPAIMH 235
           ++ +      S   L +VATD+G+P R+A    I+H
Sbjct: 437 VNGVLDREKISKYNLTIVATDSGSPARKALAFLIIH 472



 Score = 43.5 bits (101), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 71/253 (28%), Positives = 103/253 (40%), Gaps = 52/253 (20%)

Query: 16   RAIQYDNQDRYALA---------------TLIVSKAGTSLRELQFSKNEYSVSALENLPV 60
            RA+  +  DRY L                T+I+     +    +F  +E  +SALE LPV
Sbjct: 1293 RALDRETSDRYTLTIGARDAGLPNLSTSTTVIIDVLDENDNAPEFMHSEAKISALETLPV 1352

Query: 61   NYVLLTVTTNKPRDLRVKYWLSNDYG-----ERFSISRQ-GDISLMQCLDYETEDSYRFT 114
               L+T       DL +   ++   G     + F I  Q G + L + LD+E + SY   
Sbjct: 1353 GSELVTFQATDA-DLGINSEIAFSIGAGNMHDTFRIDPQLGTLYLEKHLDFEMQRSYHLN 1411

Query: 115  VYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYEL---FLPHIPLADLTPGSVIGKV 168
            + A+D     + +S +  I+V + ND  P F  P   +       IPL   TP   I  V
Sbjct: 1412 ITASDQGNPSLVSSISFVITVEDANDNAPVF--PSTAIVRQIQEGIPLN--TP---IVTV 1464

Query: 169  EAADGDKG--DRVTLSL-------------RGPYEKMFSIN-DSGHISIVD-LSALNTST 211
             A D D G   R+  SL             RG     F+I  D+G + +V  +      T
Sbjct: 1465 TAEDPDSGLNSRIRYSLIQQEPSVLVGSSTRGGSGPHFAIRPDTGVVYVVRPIDREFADT 1524

Query: 212  IQLVVVATDTGNP 224
             +L VVATD   P
Sbjct: 1525 FRLTVVATDQAEP 1537



 Score = 43.1 bits (100), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 51/208 (24%), Positives = 95/208 (45%), Gaps = 25/208 (12%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKY-WLSNDYGERFSISRQGDISLM 100
            F    YS    EN+ +   ++TV+    +   + ++ Y  +  +  E+F I++ G I   
Sbjct: 1981 FDPMSYSDELYENITIGSSVITVSATDQDSGDNGKLVYSIIGGNENEQFRITQNGTIMTS 2040

Query: 101  QCLDYETEDSYRFTVYATDTL------MTTSATVNISVVNVNDWDPRFRYPQYELFLPHI 154
            Q LD ET+  Y   + ATD        ++++  V I + +VND  P F        + +I
Sbjct: 2041 QSLDRETQSLYNLVIMATDQAKPPEKRLSSTVQVTIILKDVNDMAPEFVSSNETAVMENI 2100

Query: 155  PLADLTPGSVIGKVEAADGDKGDR--VTLSLRGPYEKMFSINDSGHI-SIVDLSAL---- 207
            P+      +V+  ++A D D+G    +  SL    +  F++   G +  ++ +SAL    
Sbjct: 2101 PI-----NTVVMAIKAIDRDEGRNSYIEYSLAPIDDGCFTL---GPVDGLLRVSALLDRE 2152

Query: 208  NTSTIQLVVVATDTGNPPRQASVPAIMH 235
            + +   L V+A D G P R  S+  ++ 
Sbjct: 2153 SRANYTLHVMAYDRGLPSRSQSLDVLVR 2180



 Score = 40.8 bits (94), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 57/233 (24%), Positives = 104/233 (44%), Gaps = 23/233 (9%)

Query: 25  RYALATLIVSKAGTSLRELQFSKNEYSVSALENLPV-NYVLLTVTTNKPRDLRVKYW--- 80
           R ALA LI+     +  E  F K+EYS    E + V +YV     T++   +    +   
Sbjct: 463 RKALAFLIIHVNDVNDHEPIFEKSEYSAVLSELVSVGSYVAGITATDEDTGINSNIFYAI 522

Query: 81  LSNDYGERFSISR-QGDISLMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVN 136
           +S +  + F I    G I+    LD E +D+    + A D           + I++++ N
Sbjct: 523 VSGNDQQWFDIDMVSGLITTHHQLDREQQDTVELRISARDGGPNPRWAYTHIKITILDEN 582

Query: 137 DWDPRFRYPQYELFLPHIPLADLTP-GSVIGKVEAADGDKGDRVTLS------LRGPYEK 189
           D  P+F     +  L  + L++ TP  +++  + A D D+G   ++S      +   Y  
Sbjct: 583 DEHPQF----VQQSLKQVNLSENTPPNTLVALLTAVDHDQGTNGSVSYMFDSQMDQRYPG 638

Query: 190 MFSINDSGHISIVDLSALNTSTI---QLVVVATDTGNPPRQASVPAIMHFPEA 239
           +F+I D+    +   + L+   I   ++ VVA D GNPP  ++   ++   +A
Sbjct: 639 IFAI-DASTGRVTTRTKLDREVIPEYEIKVVARDQGNPPLSSTATIVLRVLDA 690



 Score = 40.4 bits (93), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 42/138 (30%), Positives = 64/138 (46%), Gaps = 21/138 (15%)

Query: 103 LDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADL 159
           LD ET++ Y   + A D     +     VNI++V+VND  P F +  Y + L       +
Sbjct: 217 LDRETQNHYWLNISAQDGGRPALLGYLIVNITIVDVNDNPPIFDHSDYVVSLNE----SV 272

Query: 160 TPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSIN-DSGHISIVDLSALNTSTIQLV- 215
            PG+ + +V A D D G+  RVT  +    E  F+++ ++G I+  +      S  QLV 
Sbjct: 273 PPGTHVMQVTATDNDAGENARVTYYI-SESETQFAVDAETGVITTTEQLNCQRSCPQLVS 331

Query: 216 ---------VVATDTGNP 224
                    V A D GNP
Sbjct: 332 SCNKSCVFTVFARDHGNP 349


>gi|410913749|ref|XP_003970351.1| PREDICTED: uncharacterized protein LOC101077501 [Takifugu rubripes]
          Length = 14186

 Score = 65.5 bits (158), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 64/200 (32%), Positives = 100/200 (50%), Gaps = 21/200 (10%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKY---WLSNDYGERFSISRQ-GDI 97
            FS+  Y  S  EN PV  ++LT+T    ++  +  V Y    +S D    F I ++ GDI
Sbjct: 4347 FSQAVYKASLQENSPVGTLILTLTATDADEGVNGEVVYDFGHISEDIKSIFRIDQKTGDI 4406

Query: 98   SLMQCLDYETEDSYRFTVYATDTL-MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
             LM  +D+ET   +   V A D L +T+ A V I V +VND  P          +P    
Sbjct: 4407 ELMTMVDFETTSIFELRVTAKDGLGLTSYAKVIIDVTDVNDNPPVIYVKSMSSQIPE--- 4463

Query: 157  ADLTPGSVIG--KVEAADGDKGDRVTLSLRG--PYEKMFSINDSGHISIVDLSALN---T 209
             D++PGS +G   V+  D +K  +V  S++G  P++ + SI +  + S+V    L+    
Sbjct: 4464 -DVSPGSEVGIINVQDRDSEKNRQVRCSIQGNVPFKLVPSIKN--YYSLVTTGQLDRELV 4520

Query: 210  STIQLVVVATDTGNPPRQAS 229
            S   + + ATD G+PP  +S
Sbjct: 4521 SDYNITISATDEGSPPLSSS 4540



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 62/200 (31%), Positives = 101/200 (50%), Gaps = 21/200 (10%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPR-----DLRVKYW-LSNDYGERFSISRQ-GDI 97
            FS+  Y  S  EN PV+ V++ V+          D+  ++  +S D    FSI ++ G I
Sbjct: 7396 FSQAVYKASLPENSPVDTVVMQVSATDADEGVNGDVTYEFGHVSEDVKNVFSIDKKSGQI 7455

Query: 98   SLMQCLDYETEDSYRFTVYATDTL-MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
             ++  +DYE+E SY   V A D L +++ A V ISV +VND  P          +P    
Sbjct: 7456 KVISVIDYESESSYEIRVKAKDGLGLSSYAKVIISVTDVNDNAPIINIKSLTNPVPE--- 7512

Query: 157  ADLTPGSVIG--KVEAADGDKGDRVTLSLRG--PYEKMFSINDSGHISIVDLSALN---T 209
             D++PGS +G   V+  D +K  +V  S++   P++ + SI +  + S+V    L+    
Sbjct: 7513 -DVSPGSEVGIINVQDRDSEKNRQVRCSIQQNVPFKLVPSIKN--YYSLVTTGQLDRELV 7569

Query: 210  STIQLVVVATDTGNPPRQAS 229
            S   + + ATD G+PP  +S
Sbjct: 7570 SDYNITISATDEGSPPLSSS 7589



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 60/200 (30%), Positives = 98/200 (49%), Gaps = 21/200 (10%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPR-----DLRVKYW-LSNDYGERFSISRQ-GDI 97
            FS+  Y  S  EN PV+ V++ V+          D+  ++  +S D    FSI ++ G I
Sbjct: 8185 FSQAVYKASLPENSPVDTVVMQVSATDADEGVNGDVTYEFGHVSEDVKNVFSIDKKSGQI 8244

Query: 98   SLMQCLDYETEDSYRFTVYATDTL-MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
             ++  +DYE+E SY   V A D L +++ A V ISV +VND  P          +P    
Sbjct: 8245 KVISVIDYESESSYEIRVKAKDGLGLSSYAKVIISVTDVNDNAPIINIKSLTNPVPE--- 8301

Query: 157  ADLTPGSVIGKVEAADGDKGD----RVTLSLRGPYEKMFSINDSGHISIVDLSALN---T 209
             D++PGS +G +   D D  +    R ++    P++ + SI +  + S+V    L+    
Sbjct: 8302 -DVSPGSEVGIINVQDRDSENNRQVRCSIQQNVPFKLVPSIKN--YYSLVTTGQLDRELV 8358

Query: 210  STIQLVVVATDTGNPPRQAS 229
            S   + + ATD G+PP  +S
Sbjct: 8359 SDYNITISATDEGSPPLSSS 8378



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 61/200 (30%), Positives = 101/200 (50%), Gaps = 21/200 (10%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPR-----DLRVKYW-LSNDYGERFSISRQ-GDI 97
            FS+  Y  S  EN P++ V++ V+          D+  ++  +S D    FSI ++ G I
Sbjct: 5952 FSQAVYKASLPENSPLDTVVMQVSATDADEGVNGDVTYEFGHVSEDVKNVFSIDKKSGQI 6011

Query: 98   SLMQCLDYETEDSYRFTVYATDTL-MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
             ++  +DYE+E SY   V A D L +++ A V ISV +VND  P          +P    
Sbjct: 6012 KVISVIDYESESSYEIRVKAKDGLGLSSYAKVIISVTDVNDNAPIINIKSLTNPVPE--- 6068

Query: 157  ADLTPGSVIG--KVEAADGDKGDRVTLSLRG--PYEKMFSINDSGHISIVDLSALN---T 209
             D++PGS +G   V+  D +K  +V  S++   P++ + SI +  + S+V    L+    
Sbjct: 6069 -DVSPGSEVGIINVQDRDSEKNRQVRCSIQQNVPFKLVPSIKN--YYSLVTTGQLDRELV 6125

Query: 210  STIQLVVVATDTGNPPRQAS 229
            S   + + ATD G+PP  +S
Sbjct: 6126 SDYNITISATDEGSPPLSSS 6145



 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 56/199 (28%), Positives = 101/199 (50%), Gaps = 20/199 (10%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKP-----RDLRVKYWLSNDYGERFSIS-RQGDIS 98
            FS+  Y  S  EN P++ V++ V+          ++   + L ++  + FS++ + G++ 
Sbjct: 5164 FSQAVYKASLPENSPLDTVVMQVSATDADEGVNSEITYGFNLVSEERQPFSLNLKTGEVR 5223

Query: 99   LMQCLDYETEDSYRFTVYATDTL-MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLA 157
            L   +DYETE +Y   + A D L + + AT+ I V +VND  P  +       +P     
Sbjct: 5224 LASSIDYETESTYELQISAKDGLGLGSYATLIIEVTDVNDNAPVIQLKSLTNPVPE---- 5279

Query: 158  DLTPGSVIG--KVEAADGDKGDRVTLSLRG--PYEKMFSINDSGHISIVDLSALN---TS 210
            D++PGS +G   V+  D +K  +V  S++   P++ + SI +  + S+V    L+    S
Sbjct: 5280 DVSPGSEVGIINVQDRDSEKNRQVRCSIQQNVPFKLVPSIKN--YYSLVTTGQLDRELVS 5337

Query: 211  TIQLVVVATDTGNPPRQAS 229
               + + ATD G+PP  +S
Sbjct: 5338 DYNITISATDEGSPPLSSS 5356



 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 56/199 (28%), Positives = 101/199 (50%), Gaps = 20/199 (10%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKP-----RDLRVKYWLSNDYGERFSIS-RQGDIS 98
            FS+  Y  S  EN P++ V++ V+          ++   + L ++  + FS++ + G++ 
Sbjct: 6608 FSQAVYKASLPENSPLDTVVMQVSATDADEAVNSEITYGFNLVSEERQPFSLNLKTGEVR 6667

Query: 99   LMQCLDYETEDSYRFTVYATDTL-MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLA 157
            L   +DYETE +Y   + A D L + + AT+ I V +VND  P  +       +P     
Sbjct: 6668 LASSIDYETESTYELQISAKDGLGLGSYATLIIEVTDVNDNAPVIQLKSLTNPVPE---- 6723

Query: 158  DLTPGSVIG--KVEAADGDKGDRVTLSLRG--PYEKMFSINDSGHISIVDLSALN---TS 210
            D++PGS +G   V+  D +K  +V  S++   P++ + SI +  + S+V    L+    S
Sbjct: 6724 DVSPGSEVGIINVQDRDSEKNRQVRCSIQQNVPFKLVPSIKN--YYSLVTTGQLDRELVS 6781

Query: 211  TIQLVVVATDTGNPPRQAS 229
               + + ATD G+PP  +S
Sbjct: 6782 DYNITISATDEGSPPLSSS 6800



 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 53/199 (26%), Positives = 98/199 (49%), Gaps = 20/199 (10%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKP-----RDLRVKYWLSNDYGERFSIS-RQGDIS 98
            FS+  Y  S  EN P++ V++ V+         R++   + L ++  + FS++ R G++ 
Sbjct: 1079 FSQAVYKASLPENSPLDTVVMQVSATDADEGVNREITYGFNLLSEERQPFSLNLRTGEVR 1138

Query: 99   LMQCLDYETEDSYRFTVYATDTL-MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLA 157
            L   +DYE + +Y   + A D L + + AT+ I + +VND  P  +       +P     
Sbjct: 1139 LASSIDYERKATYEMQISAKDGLGLGSYATLIIEITDVNDNAPVIQLKSLTNPVPE---- 1194

Query: 158  DLTPGSVIGKVEAADGDKGD----RVTLSLRGPYEKMFSINDSGHISIVDLSALN---TS 210
            D++PGS +G +   D D  +    R ++    P++ + SI +  + S+V    L+    S
Sbjct: 1195 DVSPGSEVGIINVQDRDSENNRQVRCSIQQNVPFKLVPSIKN--YYSLVTTGQLDRELVS 1252

Query: 211  TIQLVVVATDTGNPPRQAS 229
               + + ATD G+PP  +S
Sbjct: 1253 DYNITISATDEGSPPLSSS 1271



 Score = 58.5 bits (140), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 58/200 (29%), Positives = 97/200 (48%), Gaps = 21/200 (10%)

Query: 45    FSKNEYSVSALENLPVNYVLLTVTTNKPR-----DLRVKYW-LSNDYGERFSISRQ-GDI 97
             FS+  Y  S  EN  ++ V++ V+          D+  ++  +S D    FSI ++ G I
Sbjct: 10546 FSQAVYKASLPENSHLDTVVMQVSATDADEGVNGDVTYEFGHVSEDVKNVFSIDKKSGQI 10605

Query: 98    SLMQCLDYETEDSYRFTVYATDTL-MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
              ++  +DYE+E SY   V A D L +++ A V ISV +VND  P          +P    
Sbjct: 10606 KVISVIDYESESSYEIRVKAKDGLGLSSYAKVIISVTDVNDNAPIINIKSLTNPVPE--- 10662

Query: 157   ADLTPGSVIGKVEAADGDKGD----RVTLSLRGPYEKMFSINDSGHISIVDLSALN---T 209
              D++PGS +G +   D D  +    R ++    P++ + SI +  + S+V    L+    
Sbjct: 10663 -DVSPGSEVGIINVQDRDSENNRQVRCSIQQNVPFKLVPSIKN--YYSLVTTGQLDRELV 10719

Query: 210   STIQLVVVATDTGNPPRQAS 229
             S   + + ATD G+PP  +S
Sbjct: 10720 SDYNITISATDEGSPPLSSS 10739



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/199 (25%), Positives = 97/199 (48%), Gaps = 20/199 (10%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKP-----RDLRVKYWLSNDYGERFSIS-RQGDIS 98
            FS+  Y  S  EN P++ V++ V+         +++   +   +D  + F+++ + G+++
Sbjct: 3545 FSQAVYKASLPENSPLDTVVMQVSATDADEGVNKEITYGFDHVSDANQAFALNPKTGEVT 3604

Query: 99   LMQCLDYETEDSYRFTVYATDTL-MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLA 157
            +   +DYE + SY   + A D L +   AT+ I + +VND  P  +       +P     
Sbjct: 3605 VASSIDYEKKSSYEMQMSAKDGLGLVAYATLMIEITDVNDNAPVIQLKSLTNPVPE---- 3660

Query: 158  DLTPGSVIGKVEAADGDKGD----RVTLSLRGPYEKMFSINDSGHISIVDLSALN---TS 210
            D++PGS +G +   D D  +    R ++    P++ + SI +  + S+V    L+    S
Sbjct: 3661 DVSPGSEVGIINVQDRDSENNRQVRCSIQQNVPFKLVPSIKN--YYSLVTTGQLDRELVS 3718

Query: 211  TIQLVVVATDTGNPPRQAS 229
               + + ATD G+PP  +S
Sbjct: 3719 DYNITISATDEGSPPLSSS 3737



 Score = 55.5 bits (132), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 73/270 (27%), Positives = 116/270 (42%), Gaps = 36/270 (13%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDLR----VKYWL--SNDYGERFS--ISRQGD 96
            F K  YS    EN      L +V+   P D R    V Y L  +   G   S  +S  GD
Sbjct: 1288 FEKESYSAYVSENNRAGSTLCSVSAGDP-DWRQNGTVIYSLLAAEVNGAPVSSYVSVNGD 1346

Query: 97   ISLMQC---LDYETEDSYRFTVYATDTL---MTTSATVNISVVNVNDWDPRFRYPQYE-- 148
              L+      DYE   S++  V A D     ++++ TV++ + +VND  P+  YP  E  
Sbjct: 1347 TGLIHAVRSFDYEQLRSFKVHVMARDNGSPPLSSNVTVSVFISDVNDNSPQILYPAPEGN 1406

Query: 149  LFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-DSGHISIV-D 203
             F+  +       GS++ KV A D D G    LS   ++     +FSI   SG I    D
Sbjct: 1407 SFMTELVPKAAHGGSLVSKVIAVDADSGQNAWLSYHIVKSSDPGLFSIGVHSGEIRTQRD 1466

Query: 204  LSALNTSTIQLVVVATDTGNPPRQASVPAIMHFPEAIVQ----------QASSKLNSGTS 253
            +S  ++    L+V   D G P   A+    +   + + +          + +SKL   TS
Sbjct: 1467 ISESDSMKQNLIVAVKDNGQPSLSATCSMYLLISDNLAEVPELKDISYDEKNSKL---TS 1523

Query: 254  STVLIILGVVLIVLGFVIILL-ILYIHKNK 282
              ++ ++ V    L F+II+L + +  + K
Sbjct: 1524 YLIIALVSVSTFFLTFIIIILGVRFCRRRK 1553



 Score = 55.1 bits (131), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 72/270 (26%), Positives = 117/270 (43%), Gaps = 36/270 (13%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDLR----VKYWL--SNDYGERFS--ISRQGD 96
            F +  YS    EN     +L +V+   P D R    V Y L  +   G   S  +S  GD
Sbjct: 2130 FEEESYSAYVSENNRAGSILCSVSAGDP-DWRQNGTVIYSLLAAEVNGAPVSSYVSVNGD 2188

Query: 97   ISLMQC---LDYETEDSYRFTVYATDTL---MTTSATVNISVVNVNDWDPRFRYPQYE-- 148
              L+      DYE   S++  V A D     ++++ TV++ + +VND  P+  YP  E  
Sbjct: 2189 TGLIHAVRSFDYEQLRSFKVHVMARDNGSPPLSSNVTVSVFISDVNDNSPQILYPAPEGN 2248

Query: 149  LFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-DSGHISIV-D 203
             F+  +       GS++ KV A D D G    LS   ++     +FSI   SG I    D
Sbjct: 2249 SFMTELVPKAAHGGSLVSKVIAVDADSGQNAWLSYHIVKSSDPGLFSIGVHSGEIRTQRD 2308

Query: 204  LSALNTSTIQLVVVATDTGNPPRQASVPAIMHFPEAIVQ----------QASSKLNSGTS 253
            +S  ++    L+V   D G P   A+    +   + + +          + +SKL   TS
Sbjct: 2309 ISESDSMKQNLIVAVKDNGQPSLSATCSMYLLISDNLAEVPELKDISYDEKNSKL---TS 2365

Query: 254  STVLIILGVVLIVLGFVIILL-ILYIHKNK 282
              ++ ++ V    L F+II+L + +  + K
Sbjct: 2366 YLIIALVSVSTFFLTFIIIILGVRFCRRRK 2395



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 72/270 (26%), Positives = 117/270 (43%), Gaps = 36/270 (13%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRDLR----VKYWL--SNDYGERFS--ISRQGD 96
           F +  YS    EN      L +V+   P D R    V Y L  +   G   S  +S  GD
Sbjct: 511 FEEESYSAYVSENNRAGSTLCSVSAGDP-DWRQNGTVIYSLLAAEVNGAPVSSYVSVNGD 569

Query: 97  ISLM---QCLDYETEDSYRFTVYATDTL---MTTSATVNISVVNVNDWDPRFRYPQYE-- 148
             L+   +  DYE   S++  V A D     ++++ TV++ + +VND  P+  YP  E  
Sbjct: 570 TGLIHAVRAFDYEQLRSFKVHVMARDNGSPPLSSNVTVSVFISDVNDNSPQILYPAPEGN 629

Query: 149 LFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-DSGHISIV-D 203
            F+  +       GS++ KV A D D G    LS   ++     +FSI   SG I    D
Sbjct: 630 SFMTELVPKAAHGGSLVSKVIAVDADSGQNAWLSYHIVKSSDPGLFSIGVHSGEIRTQRD 689

Query: 204 LSALNTSTIQLVVVATDTGNPPRQASVPAIMHFPEAIVQ----------QASSKLNSGTS 253
           +S  ++    L+V   D G P   A+    +   + + +          + +SKL   TS
Sbjct: 690 ISESDSMKQNLIVAVKDNGQPSLSATCSMYLLISDNLAEVPELKDISYDEKNSKL---TS 746

Query: 254 STVLIILGVVLIVLGFVIILL-ILYIHKNK 282
             ++ ++ V    L F+II+L + +  + K
Sbjct: 747 YLIIALVSVSTFFLTFIIIILGVRFCRRRK 776



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 72/270 (26%), Positives = 116/270 (42%), Gaps = 36/270 (13%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDLR----VKYWL--SNDYGERFS--ISRQGD 96
            F +  YS    EN      L +V+   P D R    V Y L  +   G   S  +S  GD
Sbjct: 6817 FEEESYSAYVSENNRAGSALCSVSAGDP-DWRQNGTVIYSLLAAEVNGAPVSSYVSVNGD 6875

Query: 97   ISLMQC---LDYETEDSYRFTVYATDTL---MTTSATVNISVVNVNDWDPRFRYPQYE-- 148
              L+      DYE   S++  V A D     ++++ TV++ + +VND  P+  YP  E  
Sbjct: 6876 TGLIHAVRSFDYEQLRSFKVHVMARDNGSPPLSSNVTVSVFISDVNDNSPQILYPAPEGN 6935

Query: 149  LFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-DSGHISIV-D 203
             F+  +       GS++ KV A D D G    LS   ++     +FSI   SG I    D
Sbjct: 6936 SFMTELVPKAAHGGSLVSKVIAVDADSGQNAWLSYHIVKSSDPGLFSIGVHSGEIRTQRD 6995

Query: 204  LSALNTSTIQLVVVATDTGNPPRQASVPAIMHFPEAIVQ----------QASSKLNSGTS 253
            +S  ++    L+V   D G P   A+    +   + + +          + +SKL   TS
Sbjct: 6996 ISESDSMKQNLIVAVKDNGQPSLSATCSMYLLISDNLAEVPELKDISYDEKNSKL---TS 7052

Query: 254  STVLIILGVVLIVLGFVIILL-ILYIHKNK 282
              ++ ++ V    L F+II+L + +  + K
Sbjct: 7053 YLIIALVSVSTFFLTFIIIILGVRFCRRRK 7082



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 72/270 (26%), Positives = 116/270 (42%), Gaps = 36/270 (13%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDLR----VKYWL--SNDYGERFS--ISRQGD 96
            F +  YS    EN      L +V+   P D R    V Y L  +   G   S  +S  GD
Sbjct: 3754 FEEESYSAYVSENNRAGSTLCSVSAGDP-DWRQNGTVIYSLLAAEVNGAPVSSYVSVNGD 3812

Query: 97   ISLMQC---LDYETEDSYRFTVYATDTL---MTTSATVNISVVNVNDWDPRFRYPQYE-- 148
              L+      DYE   S++  V A D     ++++ TV++ + +VND  P+  YP  E  
Sbjct: 3813 TGLIHAVRSFDYEQLRSFKVHVMARDNGSPPLSSNVTVSVFISDVNDNSPQILYPAPEGN 3872

Query: 149  LFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-DSGHISIV-D 203
             F+  +       GS++ KV A D D G    LS   ++     +FSI   SG I    D
Sbjct: 3873 SFMTELVPKAAHGGSLVSKVIAVDADSGQNAWLSYHIVKSSDPGLFSIGVHSGEIRTQRD 3932

Query: 204  LSALNTSTIQLVVVATDTGNPPRQASVPAIMHFPEAIVQ----------QASSKLNSGTS 253
            +S  ++    L+V   D G P   A+    +   + + +          + +SKL   TS
Sbjct: 3933 ISESDSMKQNLIVAVKDNGQPSLSATCSMYLLISDNLAEVPELKDISYDEKNSKL---TS 3989

Query: 254  STVLIILGVVLIVLGFVIILL-ILYIHKNK 282
              ++ ++ V    L F+II+L + +  + K
Sbjct: 3990 YLIIALVSVSTFFLTFIIIILGVRFCRRRK 4019



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 72/270 (26%), Positives = 116/270 (42%), Gaps = 36/270 (13%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDLR----VKYWL--SNDYGERFS--ISRQGD 96
            F +  YS    EN      L +V+   P D R    V Y L  +   G   S  +S  GD
Sbjct: 4557 FEEESYSAYVSENNRAGSTLCSVSAGDP-DWRQNGTVIYSLLAAEVNGAPVSSYVSVNGD 4615

Query: 97   ISLMQC---LDYETEDSYRFTVYATDTL---MTTSATVNISVVNVNDWDPRFRYPQYE-- 148
              L+      DYE   S++  V A D     ++++ TV++ + +VND  P+  YP  E  
Sbjct: 4616 TGLIHAVRSFDYEQLRSFKVHVMARDNGSPPLSSNVTVSVFISDVNDNSPQILYPAPEGN 4675

Query: 149  LFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-DSGHISIV-D 203
             F+  +       GS++ KV A D D G    LS   ++     +FSI   SG I    D
Sbjct: 4676 SFMTELVPKAAHGGSLVSKVIAVDADSGQNAWLSYHIVKSSDPGLFSIGVHSGEIRTQRD 4735

Query: 204  LSALNTSTIQLVVVATDTGNPPRQASVPAIMHFPEAIVQ----------QASSKLNSGTS 253
            +S  ++    L+V   D G P   A+    +   + + +          + +SKL   TS
Sbjct: 4736 ISESDSMKQNLIVAVKDNGQPSLSATCSMYLLISDNLAEVPELKDISYDEKNSKL---TS 4792

Query: 254  STVLIILGVVLIVLGFVIILL-ILYIHKNK 282
              ++ ++ V    L F+II+L + +  + K
Sbjct: 4793 YLIIALVSVSTFFLTFIIIILGVRFCRRRK 4822



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 72/270 (26%), Positives = 116/270 (42%), Gaps = 36/270 (13%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDLR----VKYWL--SNDYGERFS--ISRQGD 96
            F +  YS    EN      L +V+   P D R    V Y L  +   G   S  +S  GD
Sbjct: 5373 FEEESYSAYVSENNRAGSTLCSVSAGDP-DWRQNGTVIYSLLAAEVNGAPVSSYVSVNGD 5431

Query: 97   ISLMQC---LDYETEDSYRFTVYATDTL---MTTSATVNISVVNVNDWDPRFRYPQYE-- 148
              L+      DYE   S++  V A D     ++++ TV++ + +VND  P+  YP  E  
Sbjct: 5432 TGLIHAVRSFDYEQLRSFKVHVMARDNGSPPLSSNVTVSVFISDVNDNSPQILYPAPEGN 5491

Query: 149  LFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-DSGHISIV-D 203
             F+  +       GS++ KV A D D G    LS   ++     +FSI   SG I    D
Sbjct: 5492 SFMTELVPKAAHGGSLVSKVIAVDADSGQNAWLSYHIVKSSDPGLFSIGVHSGEIRTQRD 5551

Query: 204  LSALNTSTIQLVVVATDTGNPPRQASVPAIMHFPEAIVQ----------QASSKLNSGTS 253
            +S  ++    L+V   D G P   A+    +   + + +          + +SKL   TS
Sbjct: 5552 ISESDSMKQNLIVAVKDNGQPSLSATCSMYLLISDNLAEVPELKDISYDEKNSKL---TS 5608

Query: 254  STVLIILGVVLIVLGFVIILL-ILYIHKNK 282
              ++ ++ V    L F+II+L + +  + K
Sbjct: 5609 YLIIALVSVSTFFLTFIIIILGVRFCRRRK 5638



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 72/270 (26%), Positives = 116/270 (42%), Gaps = 36/270 (13%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDLR----VKYWL--SNDYGERFS--ISRQGD 96
            F +  YS    EN      L +V+   P D R    V Y L  +   G   S  +S  GD
Sbjct: 6162 FEEESYSAYVSENNRAGSTLCSVSAGDP-DWRQNGTVIYSLLAAEVNGAPVSSYVSVNGD 6220

Query: 97   ISLMQC---LDYETEDSYRFTVYATDTL---MTTSATVNISVVNVNDWDPRFRYPQYE-- 148
              L+      DYE   S++  V A D     ++++ TV++ + +VND  P+  YP  E  
Sbjct: 6221 TGLIHAVRSFDYEQLRSFKVHVMARDNGSPPLSSNVTVSVFISDVNDNSPQILYPAPEGN 6280

Query: 149  LFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-DSGHISIV-D 203
             F+  +       GS++ KV A D D G    LS   ++     +FSI   SG I    D
Sbjct: 6281 SFMTELVPKAAHGGSLVSKVIAVDADSGQNAWLSYHIVKSSDPGLFSIGVHSGEIRTQRD 6340

Query: 204  LSALNTSTIQLVVVATDTGNPPRQASVPAIMHFPEAIVQ----------QASSKLNSGTS 253
            +S  ++    L+V   D G P   A+    +   + + +          + +SKL   TS
Sbjct: 6341 ISESDSMKQNLIVAVKDNGQPSLSATCSMYLLISDNLAEVPELKDISYDEKNSKL---TS 6397

Query: 254  STVLIILGVVLIVLGFVIILL-ILYIHKNK 282
              ++ ++ V    L F+II+L + +  + K
Sbjct: 6398 YLIIALVSVSTFFLTFIIIILGVRFCRRRK 6427



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 72/270 (26%), Positives = 116/270 (42%), Gaps = 36/270 (13%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDLR----VKYWL--SNDYGERFS--ISRQGD 96
            F +  YS    EN      L +V+   P D R    V Y L  +   G   S  +S  GD
Sbjct: 7606 FEEESYSAYVSENNRAGSTLCSVSAGDP-DWRQNGTVIYSLLAAEVNGAPVSSYVSVNGD 7664

Query: 97   ISLMQC---LDYETEDSYRFTVYATDTL---MTTSATVNISVVNVNDWDPRFRYPQYE-- 148
              L+      DYE   S++  V A D     ++++ TV++ + +VND  P+  YP  E  
Sbjct: 7665 TGLIHAVRSFDYEQLRSFKVHVMARDNGSPPLSSNVTVSVFISDVNDNSPQILYPAPEGN 7724

Query: 149  LFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-DSGHISIV-D 203
             F+  +       GS++ KV A D D G    LS   ++     +FSI   SG I    D
Sbjct: 7725 SFMTELVPKAAHGGSLVSKVIAVDADSGQNAWLSYHIVKSSDPGLFSIGVHSGEIRTQRD 7784

Query: 204  LSALNTSTIQLVVVATDTGNPPRQASVPAIMHFPEAIVQ----------QASSKLNSGTS 253
            +S  ++    L+V   D G P   A+    +   + + +          + +SKL   TS
Sbjct: 7785 ISESDSMKQNLIVAVKDNGQPSLSATCSMYLLISDNLAEVPELKDISYDEKNSKL---TS 7841

Query: 254  STVLIILGVVLIVLGFVIILL-ILYIHKNK 282
              ++ ++ V    L F+II+L + +  + K
Sbjct: 7842 YLIIALVSVSTFFLTFIIIILGVRFCRRRK 7871



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 72/270 (26%), Positives = 116/270 (42%), Gaps = 36/270 (13%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDLR----VKYWL--SNDYGERFS--ISRQGD 96
            F +  YS    EN      L +V+   P D R    V Y L  +   G   S  +S  GD
Sbjct: 8395 FEEESYSAYVSENNRAGSTLCSVSAGDP-DWRQNGTVIYSLLAAEVNGAPVSSYVSVNGD 8453

Query: 97   ISLMQC---LDYETEDSYRFTVYATDTL---MTTSATVNISVVNVNDWDPRFRYPQYE-- 148
              L+      DYE   S++  V A D     ++++ TV++ + +VND  P+  YP  E  
Sbjct: 8454 TGLIHAVRSFDYEQLRSFKVHVMARDNGSPPLSSNVTVSVFISDVNDNSPQILYPAPEGN 8513

Query: 149  LFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-DSGHISIV-D 203
             F+  +       GS++ KV A D D G    LS   ++     +FSI   SG I    D
Sbjct: 8514 SFMTELVPKAAHGGSLVSKVIAVDADSGQNAWLSYHIVKSSDPGLFSIGVHSGEIRTQRD 8573

Query: 204  LSALNTSTIQLVVVATDTGNPPRQASVPAIMHFPEAIVQ----------QASSKLNSGTS 253
            +S  ++    L+V   D G P   A+    +   + + +          + +SKL   TS
Sbjct: 8574 ISESDSMKQNLIVAVKDNGQPSLSATCSMYLLISDNLAEVPELKDISYDEKNSKL---TS 8630

Query: 254  STVLIILGVVLIVLGFVIILL-ILYIHKNK 282
              ++ ++ V    L F+II+L + +  + K
Sbjct: 8631 YLIIALVSVSTFFLTFIIIILGVRFCRRRK 8660



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 72/270 (26%), Positives = 116/270 (42%), Gaps = 36/270 (13%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDLR----VKYWL--SNDYGERFS--ISRQGD 96
            F +  YS    EN      L +V+   P D R    V Y L  +   G   S  +S  GD
Sbjct: 9170 FEEESYSAYVSENNRAGSTLCSVSAGDP-DWRQNGTVIYSLLAAEVNGAPVSSYVSVNGD 9228

Query: 97   ISLMQC---LDYETEDSYRFTVYATDTL---MTTSATVNISVVNVNDWDPRFRYPQYE-- 148
              L+      DYE   S++  V A D     ++++ TV++ + +VND  P+  YP  E  
Sbjct: 9229 TGLIHAVRSFDYEQLRSFKVHVMARDNGSPPLSSNVTVSVFISDVNDNSPQILYPAPEGN 9288

Query: 149  LFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-DSGHISIV-D 203
             F+  +       GS++ KV A D D G    LS   ++     +FSI   SG I    D
Sbjct: 9289 SFMTELVPKAAHGGSLVSKVIAVDADSGQNAWLSYHIVKSSDPGLFSIGVHSGEIRTQRD 9348

Query: 204  LSALNTSTIQLVVVATDTGNPPRQASVPAIMHFPEAIVQ----------QASSKLNSGTS 253
            +S  ++    L+V   D G P   A+    +   + + +          + +SKL   TS
Sbjct: 9349 ISESDSMKQNLIVAVKDNGQPSLSATCSMYLLISDNLAEVPELKDISYDEKNSKL---TS 9405

Query: 254  STVLIILGVVLIVLGFVIILL-ILYIHKNK 282
              ++ ++ V    L F+II+L + +  + K
Sbjct: 9406 YLIIALVSVSTFFLTFIIIILGVRFCRRRK 9435



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 72/270 (26%), Positives = 116/270 (42%), Gaps = 36/270 (13%)

Query: 45    FSKNEYSVSALENLPVNYVLLTVTTNKPRDLR----VKYWL--SNDYGERFS--ISRQGD 96
             F +  YS    EN      L +V+   P D R    V Y L  +   G   S  +S  GD
Sbjct: 9967  FEEESYSAYVSENNRAGSTLCSVSAGDP-DWRQNGTVIYSLLAAEVNGAPVSSYVSVNGD 10025

Query: 97    ISLMQC---LDYETEDSYRFTVYATDTL---MTTSATVNISVVNVNDWDPRFRYPQYE-- 148
               L+      DYE   S++  V A D     ++++ TV++ + +VND  P+  YP  E  
Sbjct: 10026 TGLIHAVRSFDYEQLRSFKVHVMARDNGSPPLSSNVTVSVFISDVNDNSPQILYPAPEGN 10085

Query: 149   LFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-DSGHISIV-D 203
              F+  +       GS++ KV A D D G    LS   ++     +FSI   SG I    D
Sbjct: 10086 SFMTELVPKAAHGGSLVSKVIAVDADSGQNAWLSYHIVKSSDPGLFSIGVHSGEIRTQRD 10145

Query: 204   LSALNTSTIQLVVVATDTGNPPRQASVPAIMHFPEAIVQ----------QASSKLNSGTS 253
             +S  ++    L+V   D G P   A+    +   + + +          + +SKL   TS
Sbjct: 10146 ISESDSMKQNLIVAVKDNGQPSLSATCSMYLLISDNLAEVPELKDISYDEKNSKL---TS 10202

Query: 254   STVLIILGVVLIVLGFVIILL-ILYIHKNK 282
               ++ ++ V    L F+II+L + +  + K
Sbjct: 10203 YLIIALVSVSTFFLTFIIIILGVRFCRRRK 10232



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 72/270 (26%), Positives = 116/270 (42%), Gaps = 36/270 (13%)

Query: 45    FSKNEYSVSALENLPVNYVLLTVTTNKPRDLR----VKYWL--SNDYGERFS--ISRQGD 96
             F +  YS    EN      L +V+   P D R    V Y L  +   G   S  +S  GD
Sbjct: 10756 FEEESYSAYVSENNRAGSTLCSVSAGDP-DWRQNGTVIYSLLAAEVNGAPVSSYVSVNGD 10814

Query: 97    ISLMQC---LDYETEDSYRFTVYATDTL---MTTSATVNISVVNVNDWDPRFRYPQYE-- 148
               L+      DYE   S++  V A D     ++++ TV++ + +VND  P+  YP  E  
Sbjct: 10815 TGLIHAVRSFDYEQLRSFKVHVMARDNGSPPLSSNVTVSVFISDVNDNSPQILYPAPEGN 10874

Query: 149   LFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-DSGHISIV-D 203
              F+  +       GS++ KV A D D G    LS   ++     +FSI   SG I    D
Sbjct: 10875 SFMTELVPKAAHGGSLVSKVIAVDADSGQNAWLSYHIVKSSDPGLFSIGIHSGEIRTQRD 10934

Query: 204   LSALNTSTIQLVVVATDTGNPPRQASVPAIMHFPEAIVQ----------QASSKLNSGTS 253
             +S  ++    L+V   D G P   A+    +   + + +          + +SKL   TS
Sbjct: 10935 ISESDSMKQNLIVAVKDNGQPSLSATCSMYLLISDNLAEVPELKDISYDEKNSKL---TS 10991

Query: 254   STVLIILGVVLIVLGFVIILL-ILYIHKNK 282
               ++ ++ V    L F+II+L + +  + K
Sbjct: 10992 YLIIALVSVSTFFLTFIIIILGVRFCRRRK 11021



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 58/200 (29%), Positives = 97/200 (48%), Gaps = 21/200 (10%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKY---WLSNDYGERFSISRQ-GDI 97
            FS+  Y  S  EN P++ V++ V+    ++  +  V Y    +S+D  + FSI R+ G I
Sbjct: 8960 FSQAVYKASLPENSPLDTVVMQVSATDADEGVNGDVTYDFGHVSDDVKKIFSIDRKNGGI 9019

Query: 98   SLMQCLDYETEDSYRFTVYATDTLMTTSAT-VNISVVNVNDWDPRFRYPQYELFLPHIPL 156
             +   LD+ET  +Y   + A D L  +S T V I V +VND  P          +P    
Sbjct: 9020 KVKGALDFETVTTYDLRIKAKDGLGLSSYTKVIIDVTDVNDNIPIIYVKSITSPIPE--- 9076

Query: 157  ADLTPGSVIGKVEAADGDKGD----RVTLSLRGPYEKMFSINDSGHISIVDLSALN---T 209
             +++PGS +G +   D D  +    R ++    P++ + SI +  + S+V    L+    
Sbjct: 9077 -NVSPGSEVGIINVQDADSENNQVVRCSIQQNVPFKLVPSIKN--YYSLVTTGQLDRELV 9133

Query: 210  STIQLVVVATDTGNPPRQAS 229
            S   + + ATD G+PP  +S
Sbjct: 9134 SDYNITISATDEGSPPLSSS 9153



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 72/270 (26%), Positives = 115/270 (42%), Gaps = 36/270 (13%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDLR----VKYWL--SNDYGERFS--ISRQGD 96
            F +  YS    EN      L +V+   P D R    V Y L  +   G   S  +S  GD
Sbjct: 2919 FEEESYSAYVSENNRAGSTLCSVSAGDP-DWRQNGTVIYSLLAAEVNGAPVSSYVSVNGD 2977

Query: 97   ISLMQC---LDYETEDSYRFTVYATDTL---MTTSATVNISVVNVNDWDPRFRYPQYE-- 148
              L+      DYE   S++  V A D     ++++ TV++ + +VND  P+  YP  E  
Sbjct: 2978 TGLIHAVRSFDYEQLRSFKVHVMARDNGSPPLSSNVTVSVFISDVNDNSPQILYPAPEGN 3037

Query: 149  LFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-DSGHISIV-D 203
             F+  +       GS++ KV A D D G    LS   ++     +FSI   SG I    D
Sbjct: 3038 SFMTELVPKAAHGGSLVSKVIAVDADSGQNAWLSYHIVKSSDPGLFSIGVHSGEIRTQRD 3097

Query: 204  LSALNTSTIQLVVVATDTGNPPRQASVPAIMHFPEAIV----------QQASSKLNSGTS 253
            +S  ++    L+V   D G P   A+    +   + +            + +SKL   TS
Sbjct: 3098 ISESDSMKQNLIVAVKDNGQPSLSATCSMYLLISDNLADVPELKDISYDEKNSKL---TS 3154

Query: 254  STVLIILGVVLIVLGFVIILL-ILYIHKNK 282
              ++ ++ V    L F+II+L + +  + K
Sbjct: 3155 YLIIALVSVSTFFLTFIIIILGVRFCRRRK 3184



 Score = 51.6 bits (122), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 59/236 (25%), Positives = 111/236 (47%), Gaps = 21/236 (8%)

Query: 9    QPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVT 68
            Q + LV+ A+   N  R   AT+ ++    +     F +  Y     EN  +  V+LTV+
Sbjct: 2673 QNVNLVMVAVDGGNPQRSGTATIQITVLDANDNAPVFEQAVYKADLPENAALGTVVLTVS 2732

Query: 69   TNKPRD---LRVKYWLS--NDYGER-FSI-SRQGDISLMQCLDYETEDSYRFTVYATDTL 121
             +   +     V Y  S  +D  ++ F++ S+ G+I +   LD+E+  +Y   + A D  
Sbjct: 2733 ASDADEGVNGEVTYEFSRISDKAKKVFTLNSKTGEIKVSGPLDFESNPNYEMRINANDGF 2792

Query: 122  -MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGD--- 177
             ++T + + I + +VND  P       +  +  +P  D++PGS +G +   D D  +   
Sbjct: 2793 GLSTDSKLMIKITDVNDNAPVI---HVKSLIDPVP-EDVSPGSEVGIINVQDRDSENNRQ 2848

Query: 178  -RVTLSLRGPYEKMFSINDSGHISIVDLSALN---TSTIQLVVVATDTGNPPRQAS 229
             R ++    P++ + SI +  + S+V    L+    S   + + ATD G+PP  +S
Sbjct: 2849 VRCSIQQNVPFKLVPSIKN--YYSLVTTGQLDRELVSDYNITISATDEGSPPLSSS 2902



 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 58/236 (24%), Positives = 108/236 (45%), Gaps = 21/236 (8%)

Query: 9   QPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVT 68
           Q + LV+ A+   N  R   AT+ ++    +     F +  Y     EN  +  V+LTV+
Sbjct: 265 QNVNLVMVAVDGGNPQRSGTATIQITVLDANDNAPVFEQAVYKADLPENAALGTVVLTVS 324

Query: 69  TNKPRD---LRVKYWLS--NDYGER-FSI-SRQGDISLMQCLDYETEDSYRFTVYATDTL 121
            +   +     V Y  S  +D  ++ F++ S+ G+I +   LD+E+  +Y   + A D  
Sbjct: 325 ASDADEGVNGEVTYEFSRISDKAKKVFTLNSKTGEIKVSGPLDFESNPNYEMRIDAKDGF 384

Query: 122 -MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGD--- 177
            +++   + I + +VND  P          +P     D++PGS +G +   D D  +   
Sbjct: 385 GLSSDCKLMIKITDVNDNAPVIHVKSLTDPVPE----DVSPGSEVGIINVQDRDSENNRQ 440

Query: 178 -RVTLSLRGPYEKMFSINDSGHISIVDLSALN---TSTIQLVVVATDTGNPPRQAS 229
            R ++    P++ + SI +  + S+V    L+    S   + + ATD G+PP  +S
Sbjct: 441 VRCSIQQNVPFKLVPSIKN--YYSLVTTGQLDRELVSDYNITISATDEGSPPLSSS 494



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 57/236 (24%), Positives = 109/236 (46%), Gaps = 21/236 (8%)

Query: 9    QPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVT 68
            Q + LV+ A+   N  R   AT+ ++    +     F +  Y  +  EN  +  V+LTV+
Sbjct: 1884 QNVNLVMVAVDGGNPQRSGTATIQITVLDANDNAPVFEQAVYKANLPENAALGTVVLTVS 1943

Query: 69   TNKPRD---LRVKYWLS--NDYGER-FSI-SRQGDISLMQCLDYETEDSYRFTVYATDTL 121
             +   +     V Y  S  +D  ++ F++ S+ G+I +   LD+E+  +Y   + A D  
Sbjct: 1944 ASDADEGVNGEVTYEFSRISDKAKKVFTLNSKTGEIKVSGPLDFESNPNYEMRIDAKDGF 2003

Query: 122  -MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGD--- 177
             +++   + I + ++ND  P          +P     D++PGS +G +   D D  +   
Sbjct: 2004 GLSSDCKLMIKITDINDNAPVIYVKSLTDPVPE----DVSPGSEVGIINVQDRDSENNRQ 2059

Query: 178  -RVTLSLRGPYEKMFSINDSGHISIVDLSALN---TSTIQLVVVATDTGNPPRQAS 229
             R ++    P++ + SI +  + S+V    L+    S   + + ATD G+PP  +S
Sbjct: 2060 VRCSIQQNVPFKLVPSIKN--YYSLVTTGQLDRELVSDYNITISATDEGSPPLSSS 2113



 Score = 44.3 bits (103), Expect = 0.091,   Method: Compositional matrix adjust.
 Identities = 42/143 (29%), Positives = 68/143 (47%), Gaps = 17/143 (11%)

Query: 101   QCLDYETEDSYRFTVYATDTL---MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLA 157
             Q  D E+   Y  TV ATD+    ++TS T+++ + +VND  P F    Y  ++    + 
Sbjct: 12976 QFFDRESVSKYNITVTATDSGTPPLSTSTTLHLIISDVNDNAPLFEKQSYSAYI----VE 13031

Query: 158   DLTPGSVIGKVEAADGD--KGDRVTLSLR------GPYEKMFSIN-DSGHISIV-DLSAL 207
             + +PG+ I  V A D D  +  R++  L        P     S+N ++G IS        
Sbjct: 13032 NNSPGTSIFTVSARDSDWNQNARISYILEETHISGSPISSYLSLNSENGVISAARSFDYE 13091

Query: 208   NTSTIQLVVVATDTGNPPRQASV 230
                 +Q+VV A D G+PP  ++V
Sbjct: 13092 QIKELQIVVKAQDGGSPPLSSNV 13114



 Score = 44.3 bits (103), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 55/200 (27%), Positives = 93/200 (46%), Gaps = 21/200 (10%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKY---WLSNDYGERFSISRQ-GDI 97
            FS+  YS +  EN  +N  ++TV+    ++  +  V Y    +S      FS+++  G+I
Sbjct: 9757 FSQALYSATLPENSSMNTPVITVSATDADEGINGEVTYEFSRISEKSRNMFSLNQHTGEI 9816

Query: 98   SLMQCLDYETEDSYRFTVYATDTLMTTSAT-VNISVVNVNDWDPRFRYPQYELFLPHIPL 156
            ++   +DYE    Y   V A D    +S T V I + +VND  P      Y   L     
Sbjct: 9817 TVTGNIDYEDGQKYEVFVEAKDGYGLSSETKVIIDITDVNDNAPVI----YVKSLKDPVA 9872

Query: 157  ADLTPGSVIGKVEAADGDKGD----RVTLSLRGPYEKMFSINDSGHISIVDLSALN---T 209
             D++PGS +G +   D D  +    R ++    P++ + SI +  + S+V    L+    
Sbjct: 9873 EDVSPGSEVGIINVQDRDSENNRQVRCSIQQNVPFKLVPSIKN--YYSLVTTGQLDRELV 9930

Query: 210  STIQLVVVATDTGNPPRQAS 229
            S   + + ATD G+PP  +S
Sbjct: 9931 SDYNITISATDEGSPPLSSS 9950



 Score = 44.3 bits (103), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 49/199 (24%), Positives = 87/199 (43%), Gaps = 27/199 (13%)

Query: 45    FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYG---ERFSISRQ-GDI 97
             F+++ Y  +  EN P   +++TV     +   + +V Y  S       + F I    G I
Sbjct: 12014 FNQSLYKATVTENAPKGTLIMTVNASDIDSGSNGKVTYSFSKSKAGVTDAFDIDGDTGRI 12073

Query: 98    SLMQCLDYETEDSYRFTVYATDT-LMTTSATVNISVVNVNDWDP-----RFRYPQYELFL 151
             ++ + +D+E +    F + A D   +T SA V + V++VND  P      F  P  E   
Sbjct: 12074 TVAKEIDFEKDKRIEFRIEAKDQGGLTDSAKVEVEVLDVNDNAPVINVMSFTNPVSE--- 12130

Query: 152   PHIPLADLTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSINDSGHISIVDLSALNT 209
                   D   G+ IG +   D D G+  +V  ++ G        N   + ++   +AL+ 
Sbjct: 12131 ------DSAVGTTIGIINVKDVDSGENGQVRCTVEGNVPFKVKSNVRNYYALTTAAALDR 12184

Query: 210   STI---QLVVVATDTGNPP 225
              T+    + ++A D G+PP
Sbjct: 12185 ETLSECNITILALDGGSPP 12203



 Score = 43.5 bits (101), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 64/260 (24%), Positives = 105/260 (40%), Gaps = 28/260 (10%)

Query: 45    FSKNEYSVSALENLPVNYVLLTVTTNKP---RDLRVKYWLSNDYGERFSIS-------RQ 94
             F K  YS   +EN      + TV+       ++ R+ Y L   +     IS         
Sbjct: 13020 FEKQSYSAYIVENNSPGTSIFTVSARDSDWNQNARISYILEETHISGSPISSYLSLNSEN 13079

Query: 95    GDISLMQCLDYETEDSYRFTVYATDTL---MTTSATVNISVVNVNDWDPRFRYPQY---E 148
             G IS  +  DYE     +  V A D     ++++ TV I + + ND  P+  YP      
Sbjct: 13080 GVISAARSFDYEQIKELQIVVKAQDGGSPPLSSNVTVKILIQDQNDNPPQVLYPVQTGGS 13139

Query: 149   LFLPHIPL-ADLTPGSVIGKVEAADGDKGDRVTLSLR---GPYEKMFSIN-DSGHI-SIV 202
             +    +P  AD+  G ++ KV A D D G    LS +        +F +   +G I +I 
Sbjct: 13140 MVAEMVPRSADV--GYLVTKVVAVDVDSGQNAWLSYKLQKATDRALFEVGLQNGEIRTIR 13197

Query: 203   DLSALNTSTIQLVVVATDTGNPPRQAS----VPAIMHFPEAIVQQASSKLNSGTSSTVLI 258
              +S  +    +L V+  D G P R A+    V     FPE + +      +   +  +  
Sbjct: 13198 QVSDKDAVKQRLSVIVEDNGQPSRSATVIVNVAVADSFPEVLSEFTDFAHDKEYNDNLTF 13257

Query: 259   ILGVVLIVLGFVIILLILYI 278
              L + L V+ F+ I  ++ I
Sbjct: 13258 YLVLALAVVSFLFITCLVVI 13277



 Score = 42.7 bits (99), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 17/143 (11%)

Query: 101   QCLDYETEDSYRFTVYATDTL---MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLA 157
             Q  D E+   Y  TV ATD+    ++TS T+++ + +VND  P F    Y  ++    + 
Sbjct: 13786 QFFDRESVSKYNITVTATDSGTPPLSTSTTLHLIISDVNDNAPLFEKQSYSAYI----VE 13841

Query: 158   DLTPGSVIGKVEAADGD--KGDRVTLSLR------GPYEKMFSIN-DSGHISIV-DLSAL 207
             + +PG+ I    A D D  +  R++  L        P     S+N ++G IS        
Sbjct: 13842 NNSPGTSIFTFSARDSDWNQNARISYILEETHIGGSPISSYLSLNSENGVISAARSFDYE 13901

Query: 208   NTSTIQLVVVATDTGNPPRQASV 230
                 +Q+VV A D G+PP  ++V
Sbjct: 13902 QIKELQIVVKAQDGGSPPLSSNV 13924



 Score = 42.0 bits (97), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 52/208 (25%), Positives = 86/208 (41%), Gaps = 26/208 (12%)

Query: 45    FSKNEYSVSALENLPVNYVLL---TVTTNKPRDLRVKYWLSNDYGERFSI-----SRQGD 96
             F++ EY  + LEN PV   ++    V  +   + ++ Y +S D     S      S  G 
Sbjct: 11539 FTQREYDANILENQPVGTFVMKIQAVDVDDGSNAKIMYHISRDSNLETSSFLTINSETGA 11598

Query: 97    ISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYP-QYELFLP 152
             +   +  DYE    ++  V   D     ++++ TVN+ + + ND  P   YP Q   F+ 
Sbjct: 11599 LFTSRLFDYEQSVHFQIKVTVHDGGSPQLSSTCTVNVFIKDQNDNAPVVLYPVQTSGFIA 11658

Query: 153   HIPLADLTP-----GSVIGKVEAADGDKGDRVTLSLR---GPYEKMFSIN-DSGHISIVD 203
                  D+ P     G ++ KV A D D G    L+ R        MF++   +G I  V 
Sbjct: 11659 E----DMVPFEAPRGYLVTKVVAVDADSGHNAWLTYRVIKATRPNMFTVGMHTGEIRTVR 11714

Query: 204   LSALNTSTIQLV-VVATDTGNPPRQASV 230
                 +  T   V ++ TD G+    A+ 
Sbjct: 11715 AFQEDDETKHTVTILVTDNGSESLSATA 11742



 Score = 40.8 bits (94), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 44/143 (30%), Positives = 64/143 (44%), Gaps = 21/143 (14%)

Query: 103   LDYETEDSYRFTVYATDTL---MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADL 159
             LD E    Y  T+ ATD     +++S T+N+SV ++ND  P F    Y  ++     A  
Sbjct: 10714 LDRELVSDYNITISATDEGSPPLSSSKTLNLSVADINDNPPVFEEESYSAYVSENNRA-- 10771

Query: 160   TPGSVIGKVEAADGD--KGDRVTLSL------RGPYEKMFSIN-DSGHISIV---DLSAL 207
               GS +  V A D D  +   V  SL        P     S+N D+G I  V   D   L
Sbjct: 10772 --GSTLCSVSAGDPDWRQNGTVIYSLLAAEVNGAPVSSYVSVNGDTGLIHAVRSFDYEQL 10829

Query: 208   NTSTIQLVVVATDTGNPPRQASV 230
              +  +   V+A D G+PP  ++V
Sbjct: 10830 RSFKVH--VMARDNGSPPLSSNV 10850



 Score = 40.4 bits (93), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 66/275 (24%), Positives = 110/275 (40%), Gaps = 28/275 (10%)

Query: 30    TLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKP---RDLRVKYWLSNDYG 86
             TL V  +  +     FS   Y     EN      ++ V    P   ++ RV Y+L +   
Sbjct: 12209 TLFVKVSDVNDNAPSFSYASYKAFLTENNSPGASVIIVNARDPDENQNARVSYYLEDCEI 12268

Query: 87    ERFSIS-------RQGDISLMQCLDYETEDSYRFTVYATDTL---MTTSATVNISVVNVN 136
                 +S         G I  ++  DYE      FTV A D     ++++ +V I + + N
Sbjct: 12269 GGSPVSDYVTVDAESGVIHAVRSFDYEQIKQLVFTVKAQDGGSPPLSSNVSVKILIQDQN 12328

Query: 137   DWDPRFRYPQY---ELFLPHIPL-ADLTPGSVIGKVEAADGDKGDRVTLSLR---GPYEK 189
             D  P+  YP      +    +P  AD+  G ++ KV A D D G    LS +        
Sbjct: 12329 DNPPQVLYPVQTGGSMVAEMVPRSADV--GYLVTKVVAVDVDSGQNAWLSYKLQKATDRA 12386

Query: 190   MFSIN-DSGHI-SIVDLSALNTSTIQLVVVATDTGNPPRQAS----VPAIMHFPEAIVQQ 243
             +F +   +G I +I  +S  +    +L V+  D G P R A+    V     FPE + + 
Sbjct: 12387 LFEVGLQNGEIRTIRQVSDKDAVKQRLSVIVEDNGQPSRSATVIVNVAVANSFPEVLSEF 12446

Query: 244   ASSKLNSGTSSTVLIILGVVLIVLGFVIILLILYI 278
                  +   +  +   L + L V+ F+ I  ++ I
Sbjct: 12447 TDFAHDKEYNDNLTFYLVLALAVVSFLFITCLVVI 12481



 Score = 40.4 bits (93), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 63/260 (24%), Positives = 105/260 (40%), Gaps = 28/260 (10%)

Query: 45    FSKNEYSVSALENLPVNYVLLTVTTNKP---RDLRVKYWLSNDY--GERFSI-----SRQ 94
             F K  YS   +EN      + T +       ++ R+ Y L   +  G   S      S  
Sbjct: 13830 FEKQSYSAYIVENNSPGTSIFTFSARDSDWNQNARISYILEETHIGGSPISSYLSLNSEN 13889

Query: 95    GDISLMQCLDYETEDSYRFTVYATDTL---MTTSATVNISVVNVNDWDPRFRYPQY---E 148
             G IS  +  DYE     +  V A D     ++++ +V I + + ND  P+  YP      
Sbjct: 13890 GVISAARSFDYEQIKELQIVVKAQDGGSPPLSSNVSVKILIQDQNDNPPQVLYPVQTGGS 13949

Query: 149   LFLPHIPL-ADLTPGSVIGKVEAADGDKGDRVTLSLR---GPYEKMFSIN-DSGHI-SIV 202
             +    +P  AD+  G ++ KV A D D G    LS +        +F +   +G I +I 
Sbjct: 13950 MVAEMVPRSADV--GYLVTKVVAVDVDSGQNAWLSYKLQKATDRALFEVGLQNGEIRTIR 14007

Query: 203   DLSALNTSTIQLVVVATDTGNPPRQAS----VPAIMHFPEAIVQQASSKLNSGTSSTVLI 258
              +S  +    +L V+  D G P R A+    V     FPE + +      +   +  +  
Sbjct: 14008 QVSDKDAVKQRLSVIVEDNGQPSRSATVIVNVAVADSFPEVLSEFTDFAHDKEYNDNLTF 14067

Query: 259   ILGVVLIVLGFVIILLILYI 278
              L + L V+ F+ I  ++ I
Sbjct: 14068 YLVLALAVVSFLFITCLVVI 14087


>gi|332234753|ref|XP_003266568.1| PREDICTED: protocadherin gamma-A5 [Nomascus leucogenys]
          Length = 813

 Score = 65.5 bits (158), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 62/197 (31%), Positives = 91/197 (46%), Gaps = 23/197 (11%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWLSND---YGERFSI-SRQGDI 97
           F+ +EYSVS  EN+PV   LLT+T   P +    ++ Y   N+     E F + S  G+I
Sbjct: 242 FTSSEYSVSVPENIPVGTRLLTLTATDPDEGINGKLTYSFRNEEDKISETFQLDSNLGEI 301

Query: 98  SLMQCLDYETEDSYRFTVYATD-TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
           S +Q LDYE    Y   V A D   +  SA V ++V +VND  P       E+ L  +  
Sbjct: 302 STLQSLDYEESRFYLMEVVAQDGGALLASAKVVVTVQDVNDNAP-------EVILTSLTS 354

Query: 157 A---DLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMF----SINDSGH-ISIVDLSALN 208
           +   D  PG+VI      D D G+   ++   P    F    S+++  H ++  DL    
Sbjct: 355 SLSEDCLPGTVIALFSVHDDDSGENGEIACSIPRNLPFKLEKSVDNYYHLLTTTDLDREE 414

Query: 209 TSTIQLVVVATDTGNPP 225
           TS   + +   D G PP
Sbjct: 415 TSDYNITLTVIDHGTPP 431



 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 76/286 (26%), Positives = 125/286 (43%), Gaps = 50/286 (17%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPR---DLRVKYWLSNDYGERFSISR-------Q 94
           F +  YS S  EN P    + +VT + P    + RV Y L+ D  +   +S         
Sbjct: 452 FPQASYSTSLPENNPRGVSIFSVTAHDPDSGDNARVTYSLAEDTFQGAPLSSYVSINSDT 511

Query: 95  GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFL 151
           G +  ++  DYE     +  V A+D+    ++++ ++++ V++ ND  P   YP     L
Sbjct: 512 GILYALRSFDYEQLRDLQLWVTASDSGNPPLSSNVSLSLFVLDQNDNTPEILYPA----L 567

Query: 152 P-----HIPLADLT--PGSVIGKVEAADGDKGDRVTLSLR---GPYEKMFSIN-DSGHI- 199
           P      + LA  +  PG ++ KV A D D G    LS R        +F++   +G + 
Sbjct: 568 PTDGSAGVELAPRSAEPGYLVTKVVAVDKDSGQNAWLSFRLLKASEPGLFAVGLHTGEVR 627

Query: 200 ---SIVDLSALNTSTIQLVVVATDTGNPPRQASVPAIMHFPEAIVQQASSKLNSGTSSTV 256
              +++D  AL  S   LVV   D G PP  A+V   +   + I     + L S  + TV
Sbjct: 628 TARALLDRDALKQS---LVVAVEDHGQPPLSATVTVTVAVADRI-PDILADLGSIKTPTV 683

Query: 257 LIILGVVL-----------IVLGFVIILLILYI---HKNKHTKNNG 288
              L + L           + L FVI+LL+L +   HK++  +  G
Sbjct: 684 PQDLDLTLYLVVAVAAVSCVFLAFVIVLLVLKLRRWHKSRLLQAEG 729



 Score = 41.2 bits (95), Expect = 0.76,   Method: Compositional matrix adjust.
 Identities = 45/141 (31%), Positives = 61/141 (43%), Gaps = 17/141 (12%)

Query: 103 LDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADL 159
           LD E    Y  T+   D     ++T   + + V +VND  P F    Y   LP     + 
Sbjct: 410 LDREETSDYNITLTVIDHGTPPLSTENHILLKVADVNDNPPNFPQASYSTSLPE----NN 465

Query: 160 TPGSVIGKVEAADGDKGD--RVTLSLR------GPYEKMFSIN-DSGHI-SIVDLSALNT 209
             G  I  V A D D GD  RVT SL        P     SIN D+G + ++        
Sbjct: 466 PRGVSIFSVTAHDPDSGDNARVTYSLAEDTFQGAPLSSYVSINSDTGILYALRSFDYEQL 525

Query: 210 STIQLVVVATDTGNPPRQASV 230
             +QL V A+D+GNPP  ++V
Sbjct: 526 RDLQLWVTASDSGNPPLSSNV 546


>gi|348508893|ref|XP_003441987.1| PREDICTED: protocadherin-15 [Oreochromis niloticus]
          Length = 2302

 Score = 65.5 bits (158), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 60/194 (30%), Positives = 102/194 (52%), Gaps = 18/194 (9%)

Query: 51  SVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGERFSISRQG---DISLMQCLDYET 107
           + SA  ++P+  + L     + RD ++++ L + Y   FS+S  G    ++L+Q +D ET
Sbjct: 462 ATSASLSVPLAIIALDNDVEETRDPQLQFSL-DSYSHVFSVSATGIKRYLTLVQPVDRET 520

Query: 108 EDSYRFTVYATDTLM-TTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIG 166
           +DSY FT+ A+D +  +T+ TV I+V++ ND  P F    Y + L      D+ PG  + 
Sbjct: 521 QDSYTFTLVASDGVQESTAVTVAITVLDANDNTPTFPNVSYNVNL----FIDMMPGEAVL 576

Query: 167 KVEAADGDKGDR--VTLSLRGPYEKMFSI-NDSGHISI---VDLSALNTSTIQLVVVATD 220
           ++ A D D G    +T  +   ++  F I N SG I++   V+LS     +  L V A D
Sbjct: 577 QLSAFDSDAGQNGLITYRILAGHQGHFVIGNSSGIITVAPGVELSV--GQSYALTVEAMD 634

Query: 221 TG-NPPRQASVPAI 233
            G  P R++S+  +
Sbjct: 635 NGPEPHRRSSITTV 648



 Score = 51.2 bits (121), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 57/194 (29%), Positives = 92/194 (47%), Gaps = 12/194 (6%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTV-TTNKPRDLRVKYWLSNDYGERFSISRQ-GDISLMQ 101
           +F + +Y++   E +     LL +   ++ RD       S D    F++ +  G + L +
Sbjct: 662 RFPRQQYNLEISEAMRTGATLLNLQAVDRERDPITYKIQSGDVQGHFALQQNSGYLVLDK 721

Query: 102 CLDYETEDSYRFTVYATDTL--MTTSATVNISVVNVNDWDPRFRYPQYELFLP-HIPLAD 158
            LD ET D Y   V A+D     T++ATVNI V +VND DP F        LP ++ + +
Sbjct: 722 PLDRETLDYYTLVVTASDGHPEGTSTATVNIVVTDVNDNDPLF-----NTSLPVNLTVIE 776

Query: 159 LTPGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSINDSGHISI-VDLSALNTSTIQLVV 216
               + +G+V+A D D G    +  R   ++ +FSIN +G I+  V L         L V
Sbjct: 777 EQNHAYVGQVKATDPDLGASGQVHYRLVNHQGLFSINATGAITTAVPLDREVKGHYYLTV 836

Query: 217 VATDTGNPPRQASV 230
            A D    PR++ +
Sbjct: 837 EAWDGAENPRRSRL 850



 Score = 45.8 bits (107), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 55/171 (32%), Positives = 82/171 (47%), Gaps = 21/171 (12%)

Query: 76  RVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDTL---MTTSATVNISV 132
           +V Y L N  G  FSI+  G I+    LD E +  Y  TV A D       +  T++++V
Sbjct: 798 QVHYRLVNHQG-LFSINATGAITTAVPLDREVKGHYYLTVEAWDGAENPRRSRLTLHVTV 856

Query: 133 VNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGP-----Y 187
           ++V+D  P F    Y + LP     +   G+VI +++A D D    +T  +R        
Sbjct: 857 LDVDDNSPIFTQQTYNVNLPE----NSPKGTVILQLKAIDADLNSNLTYRIRTEGSDQDI 912

Query: 188 EKMFSIND-SGHIS---IVDLSALNTS--TIQLVVVATDT-GN-PPRQASV 230
            ++F I+  +G +S   ++D  AL  S  T    V A DT GN PP  ASV
Sbjct: 913 TQLFHIDSRTGELSVLKVLDFEALAESEPTYTFTVEALDTKGNMPPGLASV 963


>gi|241148648|ref|XP_002405854.1| protocadherin-16, putative [Ixodes scapularis]
 gi|215493769|gb|EEC03410.1| protocadherin-16, putative [Ixodes scapularis]
          Length = 3222

 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 51/173 (29%), Positives = 86/173 (49%), Gaps = 13/173 (7%)

Query: 29   ATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDY 85
            AT++VS +  +    +F++  +SV+  EN P+   ++ VT+   +   +    Y  + + 
Sbjct: 1054 ATVLVSVSDKNDNPPRFTR-LFSVNVTENAPLGAFVIQVTSSDRDAAENANATYSFTENP 1112

Query: 86   GERFSISR-QGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRY 144
            GERF+I    G++++   LD E  D Y   V A D        + +S+ +VND  PRF  
Sbjct: 1113 GERFAIDPLTGNVTVAGPLDRELRDEYLLKVAAVDGSWKAETPLTVSLQDVNDNAPRFER 1172

Query: 145  PQYELFLPHIPLADLTPGSVIGKVEAADGDK---GDRVTLSLRGPYEKMFSIN 194
              Y   LP +     + GS +G+V A D DK      V+ SLR P + +F ++
Sbjct: 1173 MAYRFRLPEL----QSGGSFVGRVAATDADKTGPNAAVSYSLRRPSD-LFRVD 1220



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 60/193 (31%), Positives = 90/193 (46%), Gaps = 19/193 (9%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGE----RFSISRQ-GDIS 98
           +F    Y++S  E+ PV   +  +  + P DL      S   G+     F I  Q G + 
Sbjct: 15  RFQNGPYTISLSEDAPVGSTVAVLQADDP-DLEGSVRFSIAEGQSDAGHFRIDPQTGALL 73

Query: 99  LMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLAD 158
           L++ LD E +  + F+V ATD L +T A V+I V + ND  P F    Y   L      D
Sbjct: 74  LVEALDRELQAQHLFSVTATDGLQSTEALVSIEVTDTNDNLPLFGEAAYSFDL----WED 129

Query: 159 LTPGSVIGKVEAADGDKG--DRVTLSLRGPYEK-MFSIN-DSGHISIVDLSALNTSTIQ- 213
              G+ +G V A D D G   +V+ S+   +   +FS+N  +G  ++   S L+    Q 
Sbjct: 130 TQRGAQVGAVSAVDADLGLNRQVSYSVLSDWANDVFSLNPQTGVFTLT--SHLDYELYQH 187

Query: 214 --LVVVATDTGNP 224
             LVV A D+G P
Sbjct: 188 YVLVVQAQDSGTP 200



 Score = 55.5 bits (132), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 50/176 (28%), Positives = 83/176 (47%), Gaps = 12/176 (6%)

Query: 9    QPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVT 68
            Q   L VRA       + A   + V+  G +     F+   Y +   EN PV+  LLTV+
Sbjct: 1352 QMFALKVRATDQGVPPKSADTVVSVTITGENQFSPVFTALSYQIIIPENEPVHSELLTVS 1411

Query: 69   -TNKPRDL--RVKYWL-SNDYGERFSIS-RQGDISLMQCLDYETEDSYRFTVYATDTLM- 122
             T+    L   V+Y + S + G+ F++    G +++   LDYET   +R  V A D    
Sbjct: 1412 ATDADSGLNGEVRYSIESGNTGDSFAMEPHNGALTISAVLDYETVPEFRLNVSACDAAFH 1471

Query: 123  --TTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG 176
                SAT+ + V +VND  P+F    ++ ++      +  PG+ + ++ A+D D G
Sbjct: 1472 RKCASATLTVIVTDVNDCPPQFNATHFDAYVAE----NEPPGTTVTQLSASDADSG 1523



 Score = 54.3 bits (129), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 67/239 (28%), Positives = 101/239 (42%), Gaps = 35/239 (14%)

Query: 14  VVRAIQYDNQDRYALATLIVSKAGTSLRELQFS-------------------KNEYSVSA 54
           V R++ Y+ + RY L       AG S  EL+F                     + Y +  
Sbjct: 489 VRRSLDYERRTRYLLTLQAEDCAGAS-SELRFDTATVTISVTDVNDNAPAFLDSPYELHV 547

Query: 55  LENLPVNYVLLTVTTNKPRDLR---VKYWLSNDYGERFSIS-RQGDISLMQCLDYETEDS 110
           +EN     VLLT+  +    L    + Y L +     F I+   G++SL + LD E  D 
Sbjct: 548 VENAATPVVLLTLAAHDADQLPSGPIHYRLEDLGHGAFRINGTSGELSLERPLDRELRDR 607

Query: 111 YRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGK 167
           Y  TV A D+     T + TV++ V +VND  P F   +Y   L     AD      + +
Sbjct: 608 YLLTVLAVDSGNPRQTGTGTVSVFVSDVNDNAPEFDRSRYVASLAENQPAD----HPVTR 663

Query: 168 VEAADGDKGD--RVTLSLRGPYEKMFSIN-DSGHI-SIVDLSALNTSTIQLVVVATDTG 222
           + A D D G   R+  SL G     FS++ +SG + + V +        +L +VA D G
Sbjct: 664 ITATDADVGRNARIRYSLHGEQGSRFSVDAESGLVRARVPMDREECERYELRLVAHDDG 722



 Score = 47.4 bits (111), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 62/207 (29%), Positives = 90/207 (43%), Gaps = 20/207 (9%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWL-SNDYGERFSISRQ-GDISL 99
           F   +YS +  EN  V   +L V+    ++    +V+Y + + D    FS+ +  G + +
Sbjct: 430 FDPRQYSAAVSENSSVGASVLRVSATDQDEGASGQVRYSIIAGDPNHDFSVGQDTGVLRV 489

Query: 100 MQCLDYETEDSYRFTVYATDTLMTTS------ATVNISVVNVNDWDPRFRYPQYELFLPH 153
            + LDYE    Y  T+ A D    +S      ATV ISV +VND  P F    YEL   H
Sbjct: 490 RRSLDYERRTRYLLTLQAEDCAGASSELRFDTATVTISVTDVNDNAPAFLDSPYEL---H 546

Query: 154 IPLADLTPGSVIGKVEAADGDK--GDRVTLSLRGPYEKMFSIND-SGHISIVD-LSALNT 209
           +     TP  V+  + A D D+     +   L       F IN  SG +S+   L     
Sbjct: 547 VVENAATP-VVLLTLAAHDADQLPSGPIHYRLEDLGHGAFRINGTSGELSLERPLDRELR 605

Query: 210 STIQLVVVATDTGNPPRQASVPAIMHF 236
               L V+A D+GN PRQ     +  F
Sbjct: 606 DRYLLTVLAVDSGN-PRQTGTGTVSVF 631



 Score = 44.7 bits (104), Expect = 0.085,   Method: Compositional matrix adjust.
 Identities = 54/197 (27%), Positives = 83/197 (42%), Gaps = 17/197 (8%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLS-NDYGERFSISRQGDISLM 100
           F    YS   LEN+ V   LL V+    +   + R+ Y ++  D G + +I   G I   
Sbjct: 222 FDPMSYSDEVLENVTVGSSLLRVSATDLDSGDNGRIVYSIAEGDPGGQLAILANGTIVTR 281

Query: 101 QCLDYETEDSYRFTVYATDTL------MTTSATVNISVVNVNDWDPRFRYPQYELFLPHI 154
             LD E +  Y   V ATD        +++S  V I + +VND  P F  P       + 
Sbjct: 282 LPLDRERKSLYSLVVRATDQAPEVHKRLSSSVQVTIVLKDVNDMVPEFVTPNVTSVQENA 341

Query: 155 PLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSGHISIVD--LSALNTSTI 212
           P       +++  V+A D D+G    +      E  FS+     +  V   L     ++ 
Sbjct: 342 PA-----NTIVMAVKAVDRDEGRNSYVEYSVSPEHTFSLGPVDGLLRVRGLLDREQRASY 396

Query: 213 QLVVVATDTGNPPRQAS 229
           +L+V A D G+P R AS
Sbjct: 397 ELLVTARDRGHPVRVAS 413



 Score = 39.7 bits (91), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 46/154 (29%), Positives = 78/154 (50%), Gaps = 13/154 (8%)

Query: 76  RVKYWLSNDYG-ERFSISRQ-GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNI 130
           +V Y + +D+  + FS++ Q G  +L   LDYE    Y   V A D+    ++++ATV +
Sbjct: 151 QVSYSVLSDWANDVFSLNPQTGVFTLTSHLDYELYQHYVLVVQAQDSGTPSLSSTATVYV 210

Query: 131 SVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGD--RVTLSLR--GP 186
           +V+++ND  P F    Y   +    L ++T GS + +V A D D GD  R+  S+    P
Sbjct: 211 NVLDLNDNAPLFDPMSYSDEV----LENVTVGSSLLRVSATDLDSGDNGRIVYSIAEGDP 266

Query: 187 YEKMFSINDSGHISIVDLSALNTSTIQLVVVATD 220
             ++  + +   ++ + L     S   LVV ATD
Sbjct: 267 GGQLAILANGTIVTRLPLDRERKSLYSLVVRATD 300



 Score = 38.9 bits (89), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 68/258 (26%), Positives = 111/258 (43%), Gaps = 44/258 (17%)

Query: 8    LQPITLVV---RAIQYDNQDRYALATLIVSKAGTSLR-----ELQ-------------FS 46
            +QP T V+   R +  + Q R  L+  +++K G S+R     E Q             F 
Sbjct: 1645 IQPSTGVITVSRTLDREAQARVVLS--VMAKNGGSIRGNDTDEAQVVVSIQDGNDPPVFL 1702

Query: 47   KNEYSVSALENLPVNYVLLTVTTNKPRDLRV---KYW---LSNDYGERFSISRQ-GDISL 99
            +  Y     E  PV   +L+V+    RD+R    +++   L  D  + F +  Q G +  
Sbjct: 1703 QPLYEARISEAAPVGSPVLSVSAVD-RDVRPNNHQFFYSILEGDPNKVFGVDSQTGLLHT 1761

Query: 100  MQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
               LD E+  SY  T+ A D      T +ATV +++ +VND  P F       ++    L
Sbjct: 1762 AAPLDRESVPSYTLTLAAIDRGSPPQTGTATVRVTLDDVNDNGPEFEPADLLGYV----L 1817

Query: 157  ADLTPGSVIGKVEAADGD---KGDRVTLSLRGPYEK-MFSINDSGHI--SIVDLSALNTS 210
             D  P + +  + A D D    G     SL G   + +F ++    +  +   L    T 
Sbjct: 1818 EDEPPYTSVLTLAARDRDLAPNGAPFAYSLVGGARRNLFELDRQTGVLRTTQRLDREATP 1877

Query: 211  TIQLVVVATDTGNPPRQA 228
            ++QL+V   D+GNPP +A
Sbjct: 1878 SLQLLVEVQDSGNPPIRA 1895


>gi|345494251|ref|XP_001605047.2| PREDICTED: cadherin-87A-like [Nasonia vitripennis]
          Length = 1595

 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 49/153 (32%), Positives = 79/153 (51%), Gaps = 15/153 (9%)

Query: 95  GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFL 151
           G +   Q +DYE      FTV A DT    ++TSA V ++++NVND DP+F +  Y   +
Sbjct: 708 GIVRTSQIIDYEETKQLEFTVVAYDTGVPQLSTSAKVTVTIINVNDEDPKFEHKSYNATV 767

Query: 152 PHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSI-NDSGHISIVDLSALN 208
                 +  PG+ +  V+A D D+G    VT SL G +   F+I +++G I++   + L+
Sbjct: 768 KE----NSQPGTRVTVVKAIDADEGPFGEVTYSLIGEHASDFNIGHETGEITVGGATVLD 823

Query: 209 TS---TIQLVVVATDTG--NPPRQASVPAIMHF 236
                 I + V+A+D    N  R  SVP ++  
Sbjct: 824 REIIPEITISVMASDNAPMNSRRSTSVPVVIKL 856



 Score = 42.0 bits (97), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 43/154 (27%), Positives = 80/154 (51%), Gaps = 19/154 (12%)

Query: 79  YWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDW 138
           + + +D GE  +I+++  + +    +    DS   TV A+D   +  A ++I+V +VN+ 
Sbjct: 366 FRIDSDSGE-ITIAKRAPVDMSNSTN--GGDSISLTVQASDGTFSDKALISITVRDVNNN 422

Query: 139 DPRFRYPQYELFLPHIPLADLTP-GSVIGKVEAADGDKGDRVTLSLR---GPYEKMFSIN 194
            P F    ++L+   IP  +L+P G+V+ ++ A D D G    L  R   G +   F++N
Sbjct: 423 APAF---AHDLYTASIP--ELSPVGTVVEELTATDADSGINAELVYRIQKGGFND-FAVN 476

Query: 195 D-SGHISI---VDLSALNTSTIQLVVVATDTGNP 224
           + SG + +   +D    NT  ++  V+A D G+P
Sbjct: 477 ETSGAVFVSRKLDYDQRNTYHVE--VIAFDKGSP 508



 Score = 39.7 bits (91), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 42/154 (27%), Positives = 65/154 (42%), Gaps = 25/154 (16%)

Query: 49   EYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGER-FSISR-QGDISLMQCL 103
            EY+ +  EN P +Y +  VT    ++ R  +V Y++     +R F I +  G I   +  
Sbjct: 1090 EYNFNVPENRPKDYYVGKVTAEDKDEGRHAKVYYYIKAGNADRAFYIDKSDGSIYTNRSF 1149

Query: 104  DYETEDSYRFTVYATD----------------TLMTTSATVNISVVNVNDWDPRFRYPQY 147
            D E  DSY  T+ A +                 L      V I +++ ND  P F    Y
Sbjct: 1150 DREKRDSYLLTILAANDPDIYVDPKDTDHSRKNLEHGYVNVTIKILDENDNPPAFERSAY 1209

Query: 148  ELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTL 181
              F     +A++    ++ KV A+D D GD  TL
Sbjct: 1210 --FAGVNSMANIN--ELVTKVTASDADLGDNGTL 1239



 Score = 38.5 bits (88), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 44/149 (29%), Positives = 70/149 (46%), Gaps = 36/149 (24%)

Query: 92  SRQGDISLMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQY- 147
           +R GD  + + + YE   S      ATD      TTS ++ +S+ + ND  P+F++ +Y 
Sbjct: 271 ARDGDRGMPRKIVYELVTSES----ATDDNGKGQTTSVSLRLSLADANDSPPKFQHKKYR 326

Query: 148 -------ELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSL-RGPYEKMFSIN-DSGH 198
                  E F P  PL          +V+A D DK  ++T S+  G    +F I+ DSG 
Sbjct: 327 AVIDEGAEKFEP--PL----------RVQARDRDKTSKITYSIVEGNKMGIFRIDSDSGE 374

Query: 199 ISIVDLSALNTS-------TIQLVVVATD 220
           I+I   + ++ S       +I L V A+D
Sbjct: 375 ITIAKRAPVDMSNSTNGGDSISLTVQASD 403


>gi|301789471|ref|XP_002930152.1| PREDICTED: cadherin-17-like, partial [Ailuropoda melanoleuca]
          Length = 782

 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 81/298 (27%), Positives = 137/298 (45%), Gaps = 43/298 (14%)

Query: 14  VVRAIQYDNQDRYALATLIVSKAGTSLREL-QFSKNEYSVSALENLPVNYVLLTVTTNKP 72
           +V  + Y N    A   LIV    T + E+ +FS+  Y     E++ V   +  VT   P
Sbjct: 489 LVSGVNY-NSSSCATFKLIV----TDVNEVPEFSQRVYQAKVSEDVAVGTKVGNVTARDP 543

Query: 73  RDLRVKYWLSNDYGERFSISR-QGDISLMQCLDYETEDSYRFTVYATD---TLMTTSATV 128
            +L + Y L ++      I+   G+IS +  LD E E  YR  V AT+   + ++++A  
Sbjct: 544 ENLDISYSLGDNRRGWLKINPVTGEISTVAPLDREAESVYRVQVVATEVGGSSLSSTAYF 603

Query: 129 NISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYE 188
           ++++++VND  PR       LFL H PL     G+VI   EA D D+      S RGP  
Sbjct: 604 HLTLLDVNDNPPRLAKDDPGLFLCH-PLQ--ATGTVI--FEATDDDQ-----QSFRGPRF 653

Query: 189 KMFSINDSGHISIVDLSALNTSTIQLVVVAT--------------DTGNPPRQASVPAIM 234
             FS+      +  ++S++N +  +L    T              D G PP +  V   +
Sbjct: 654 D-FSLGSDMLQNTWEVSSINGTHAKLRTKHTDFEERVYNIPIRINDRGQPPLEGIVSLPV 712

Query: 235 HFPEAIVQQASSKLNSGTSS---TVLIILGVVL---IVLGFVIILLILYIHKNKHTKN 286
            F + +  + S    +G  S   TV + +G++L   +V+G ++ ++ + I KN+   N
Sbjct: 713 TFCKCV--EGSCFRAAGRQSGMPTVGMAVGILLTTFLVIGIILAVVFIRIKKNEGKAN 768


>gi|195108383|ref|XP_001998772.1| GI23447 [Drosophila mojavensis]
 gi|193915366|gb|EDW14233.1| GI23447 [Drosophila mojavensis]
          Length = 1684

 Score = 65.1 bits (157), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 67/222 (30%), Positives = 107/222 (48%), Gaps = 13/222 (5%)

Query: 37  GTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKY-WLSNDYGERFSISRQ- 94
           G + +  +F+   Y V   E   +N  +  V  + P +  V Y  +S +   +FS+ +Q 
Sbjct: 566 GPNTKPPRFTNALYEVQVSEGAEINSTVTVVHADDPENDPVVYSIMSGNDLRQFSVGQQS 625

Query: 95  GDISLMQCLDYETEDSYRFTVYATDTL-MTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
           G I +++ LD E+   Y+  V A D   +++SATVNI V ++ND +P F     EL  P+
Sbjct: 626 GIIMVIRKLDRESLTRYQLIVKAEDNGGLSSSATVNIKVTDINDKNPEFD----ELTQPY 681

Query: 154 IPLADLT-PGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSIND-SGHISIVD-LSALNTS 210
           +   D     + +G V A D D+G    ++   P +  FSIN+ SG I   D L     S
Sbjct: 682 VFHVDEGLDDAFVGIVHATDADEGINAEITYSIPTDIPFSINNKSGEIRTSDKLDYERLS 741

Query: 211 TIQLVVVATDTGNPPR--QASVPAIMH-FPEAIVQQASSKLN 249
             + VV A D     R   ASV  I+H  P+ + +   + +N
Sbjct: 742 EYKFVVTAKDGAPDARLGTASVTVIIHDLPDEVPKFNDASIN 783



 Score = 46.2 bits (108), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 57/225 (25%), Positives = 98/225 (43%), Gaps = 51/225 (22%)

Query: 38  TSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGERFSIS--RQG 95
           T  R +Q    +  V+ L    V Y ++    N   D   K   ++ YG  F+IS   QG
Sbjct: 129 TVYRNIQALDKDAGVNGL----VEYFIVKGDANSTED--EKLTSADGYG-TFAISFPHQG 181

Query: 96  DISLMQCLDYETEDSYRFTVYATDTL------MTTSATVNISVVNVNDWDPRFRY----- 144
            +++ + LDYE    Y  T+ A+D        ++++ T+ +++ + +D DP F Y     
Sbjct: 182 QVTVAKTLDYEKIQRYYLTIVASDRARNVADRLSSTTTLTVNIADSDDMDPSFIYRGCVL 241

Query: 145 -------PQYELFLPHIPLADLTPGSVIG-------KVEAADGDK-GDRVTLSLR----G 185
                  P+Y   +P         GSV G       +++A D D    R+  S      G
Sbjct: 242 LDGACINPEYTASVP--------AGSVQGVLNVLPERIQAVDLDTISSRIRYSFASGVPG 293

Query: 186 PYEKMFSINDSGHISIVDLSALNTSTIQ---LVVVATDTGNPPRQ 227
            Y   F I++   + +  + A++TST +   +VV A +   PPR+
Sbjct: 294 NYADYFEIDEETGV-LKQIKAVDTSTAKRYDIVVRAEEISPPPRR 337


>gi|328710951|ref|XP_003244410.1| PREDICTED: protocadherin-like wing polarity protein stan-like
           isoform 2 [Acyrthosiphon pisum]
          Length = 3165

 Score = 65.1 bits (157), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 66/232 (28%), Positives = 108/232 (46%), Gaps = 27/232 (11%)

Query: 25  RYALATLIVSKAGTSLRELQFSKNEYSVSALENL-----PVNYVLLTVTTNKPRDLRVKY 79
           R A+A+L+V     +    QFS+  Y+ +  E+L     PV   +     ++  +  V+Y
Sbjct: 485 RSAIASLVVKVLDDNDNYPQFSERAYTANVAEDLNPNQRPVISTIKATDADQGLNAVVRY 544

Query: 80  WL--SNDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVV 133
            +   N  G+ FSI S+ G++SL++ LDYE   SYR  + A D      + +  + ++V 
Sbjct: 545 AIIGGNTQGQ-FSIDSQNGEVSLVKSLDYEAMRSYRLMIRAQDGGNPSRSNTTQLLVNVK 603

Query: 134 NVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR---GPYEKM 190
           +VND  PRF    Y        L ++  G  I +V+A D D+G+   L  R     +E  
Sbjct: 604 DVNDNPPRF----YTSLFQESVLENVAVGYSIVRVQAYDADEGENAALKYRIFPRDFEGT 659

Query: 191 FSIN-------DSGHISIVDLSALNTS-TIQLVVVATDTGNPPRQASVPAIM 234
            + N        SG +    L    T+   Q  VVA D G+PP+ A+   ++
Sbjct: 660 LAENLPITVDEKSGWVYTTHLLDRETNPKYQFQVVAEDGGDPPKSATASVVV 711



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 55/204 (26%), Positives = 94/204 (46%), Gaps = 20/204 (9%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKP---RDLRVKYWLSNDYGE--RFSISRQ-GDIS 98
            F    Y+ S  E+ PV   +L V+       ++  + Y L++ YG+   F+I+ Q G I 
Sbjct: 826  FDNAPYTASIYEDAPVGSTVLVVSATDGDVGQNALITYSLASGYGDASEFTINAQSGAIV 885

Query: 99   LMQCLDYETEDSYRFTVYATDTL---MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIP 155
              + LD E +  Y  TV A D     ++ +  V IS+ ++ND  P+F    Y   +    
Sbjct: 886  TTKALDREVQSGYLLTVTARDGGNPPLSDTTDVEISITDINDNAPQFFNASYYGSVSE-- 943

Query: 156  LADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDSGHISIVDLSALNTSTI- 212
              D   G+ + +V A+D D G   R+  +L    E  F I+ +  I +   ++L+  +I 
Sbjct: 944  --DALTGTSVLQVSASDADSGLNGRIKYALDDGVEA-FVIDPTSGI-LRTAASLDRESIP 999

Query: 213  --QLVVVATDTGNPPRQASVPAIM 234
               + V A D G+P    +VP  +
Sbjct: 1000 QYNIHVFAIDKGSPSLSTAVPVTI 1023



 Score = 46.6 bits (109), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 59/243 (24%), Positives = 107/243 (44%), Gaps = 25/243 (10%)

Query: 8   LQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTV 67
           ++   L++RA    N  R     L+V+    +    +F  + +  S LEN+ V Y ++ V
Sbjct: 575 MRSYRLMIRAQDGGNPSRSNTTQLLVNVKDVNDNPPRFYTSLFQESVLENVAVGYSIVRV 634

Query: 68  T---TNKPRDLRVKYWL-----SNDYGERFSIS---RQGDISLMQCLDYETEDSYRFTVY 116
                ++  +  +KY +          E   I+   + G +     LD ET   Y+F V 
Sbjct: 635 QAYDADEGENAALKYRIFPRDFEGTLAENLPITVDEKSGWVYTTHLLDRETNPKYQFQVV 694

Query: 117 ATDTL---MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADG 173
           A D      + +A+V +++ +VND +P F   QY++ +      D  PG+ +  V A D 
Sbjct: 695 AEDGGDPPKSATASVVVTIQDVNDNEPIFHPKQYDVVISE----DSPPGTPLTTVMATDP 750

Query: 174 DKGDR-----VTLSLRGPYEKMFSINDSGHISIVD-LSALNTSTIQLVVVATDTGNPPRQ 227
           D+  R     V+ +LRG +  + + +  G +++   L         L V ATD+G     
Sbjct: 751 DENPRLHYEIVSGNLRGRF-AIATHSGKGLVTVAQPLDYKQEKRFILSVTATDSGGLSDT 809

Query: 228 ASV 230
           A++
Sbjct: 810 ATI 812


>gi|328710949|ref|XP_001947627.2| PREDICTED: protocadherin-like wing polarity protein stan-like
           isoform 3 [Acyrthosiphon pisum]
          Length = 3166

 Score = 65.1 bits (157), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 66/232 (28%), Positives = 108/232 (46%), Gaps = 27/232 (11%)

Query: 25  RYALATLIVSKAGTSLRELQFSKNEYSVSALENL-----PVNYVLLTVTTNKPRDLRVKY 79
           R A+A+L+V     +    QFS+  Y+ +  E+L     PV   +     ++  +  V+Y
Sbjct: 485 RSAIASLVVKVLDDNDNYPQFSERAYTANVAEDLNPNQRPVISTIKATDADQGLNAVVRY 544

Query: 80  WL--SNDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVV 133
            +   N  G+ FSI S+ G++SL++ LDYE   SYR  + A D      + +  + ++V 
Sbjct: 545 AIIGGNTQGQ-FSIDSQNGEVSLVKSLDYEAMRSYRLMIRAQDGGNPSRSNTTQLLVNVK 603

Query: 134 NVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR---GPYEKM 190
           +VND  PRF    Y        L ++  G  I +V+A D D+G+   L  R     +E  
Sbjct: 604 DVNDNPPRF----YTSLFQESVLENVAVGYSIVRVQAYDADEGENAALKYRIFPRDFEGT 659

Query: 191 FSIN-------DSGHISIVDLSALNTS-TIQLVVVATDTGNPPRQASVPAIM 234
            + N        SG +    L    T+   Q  VVA D G+PP+ A+   ++
Sbjct: 660 LAENLPITVDEKSGWVYTTHLLDRETNPKYQFQVVAEDGGDPPKSATASVVV 711



 Score = 48.5 bits (114), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 55/204 (26%), Positives = 94/204 (46%), Gaps = 20/204 (9%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKP---RDLRVKYWLSNDYGE--RFSISRQ-GDIS 98
            F    Y+ S  E+ PV   +L V+       ++  + Y L++ YG+   F+I+ Q G I 
Sbjct: 826  FDNAPYTASIYEDAPVGSTVLVVSATDGDVGQNALITYSLASGYGDASEFTINAQSGAIV 885

Query: 99   LMQCLDYETEDSYRFTVYATDTL---MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIP 155
              + LD E +  Y  TV A D     ++ +  V IS+ ++ND  P+F    Y   +    
Sbjct: 886  TTKALDREVQSGYLLTVTARDGGNPPLSDTTDVEISITDINDNAPQFFNASYYGSVSE-- 943

Query: 156  LADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDSGHISIVDLSALNTSTI- 212
              D   G+ + +V A+D D G   R+  +L    E  F I+ +  I +   ++L+  +I 
Sbjct: 944  --DALTGTSVLQVSASDADSGLNGRIKYALDDGVEA-FVIDPTSGI-LRTAASLDRESIP 999

Query: 213  --QLVVVATDTGNPPRQASVPAIM 234
               + V A D G+P    +VP  +
Sbjct: 1000 QYNIHVFAIDKGSPSLSTAVPVTI 1023



 Score = 46.6 bits (109), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 59/243 (24%), Positives = 107/243 (44%), Gaps = 25/243 (10%)

Query: 8   LQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTV 67
           ++   L++RA    N  R     L+V+    +    +F  + +  S LEN+ V Y ++ V
Sbjct: 575 MRSYRLMIRAQDGGNPSRSNTTQLLVNVKDVNDNPPRFYTSLFQESVLENVAVGYSIVRV 634

Query: 68  T---TNKPRDLRVKYWL-----SNDYGERFSIS---RQGDISLMQCLDYETEDSYRFTVY 116
                ++  +  +KY +          E   I+   + G +     LD ET   Y+F V 
Sbjct: 635 QAYDADEGENAALKYRIFPRDFEGTLAENLPITVDEKSGWVYTTHLLDRETNPKYQFQVV 694

Query: 117 ATDTL---MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADG 173
           A D      + +A+V +++ +VND +P F   QY++ +      D  PG+ +  V A D 
Sbjct: 695 AEDGGDPPKSATASVVVTIQDVNDNEPIFHPKQYDVVISE----DSPPGTPLTTVMATDP 750

Query: 174 DKGDR-----VTLSLRGPYEKMFSINDSGHISIVD-LSALNTSTIQLVVVATDTGNPPRQ 227
           D+  R     V+ +LRG +  + + +  G +++   L         L V ATD+G     
Sbjct: 751 DENPRLHYEIVSGNLRGRF-AIATHSGKGLVTVAQPLDYKQEKRFILSVTATDSGGLSDT 809

Query: 228 ASV 230
           A++
Sbjct: 810 ATI 812


>gi|281345412|gb|EFB20996.1| hypothetical protein PANDA_000353 [Ailuropoda melanoleuca]
          Length = 3819

 Score = 65.1 bits (157), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 62/197 (31%), Positives = 89/197 (45%), Gaps = 23/197 (11%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWLSND---YGERFSI-SRQGDI 97
            F+++EY VS  EN+PV   LLT+T   P +     + Y   N+     E F + S  G+I
Sbjct: 1028 FTRSEYRVSVPENIPVGTRLLTLTATDPDEGINGELTYSFRNEEDKISETFKLDSNLGEI 1087

Query: 98   SLMQCLDYETEDSYRFTVYATD-TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
            S +Q LDYE    Y   V A D   +  SA V I+V +VND  P       E+ L  +  
Sbjct: 1088 STLQPLDYEESRFYLMEVVAQDGGALLASAKVLITVQDVNDNVP-------EVILTSLAS 1140

Query: 157  A---DLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDS--GHISIVDLSALNTST 211
            +   D  PG++I      DGD G+   +    P    F +  S   +  ++   AL+   
Sbjct: 1141 SISEDCPPGTIIALFSVHDGDSGENGEILCSIPRNLPFKLEKSVDNYYHLLTTKALDREE 1200

Query: 212  I---QLVVVATDTGNPP 225
            I    + V   D GNPP
Sbjct: 1201 ISDYNITVTVIDCGNPP 1217



 Score = 55.8 bits (133), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 76/293 (25%), Positives = 126/293 (43%), Gaps = 45/293 (15%)

Query: 26   YALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKP---RDLRVKYWLS 82
            Y+   + V+ A T+     F ++ YSV   EN P    + +VT + P    + R+ Y LS
Sbjct: 3427 YSETHISVNVADTNDNPPAFPQSSYSVYIPENNPRGASIFSVTAHDPDSYENARITYSLS 3486

Query: 83   NDYGERFSISR-------QGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISV 132
             D  +  S+S         G +  +   DYE     +  V A D+    ++++ +++I +
Sbjct: 3487 EDSLQGASLSSYVSINSDTGILYALHSFDYEQFRDLQLRVTAHDSGDPPLSSNVSLSIFI 3546

Query: 133  VNVNDWDPRFRYPQYELFLP-----HIPLADLT--PGSVIGKVEAADGDKGDRVTLS--- 182
            V+ ND  P   YP     LP      + LA  +  PG ++ KV A D D G    LS   
Sbjct: 3547 VDQNDNTPEILYPA----LPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRL 3602

Query: 183  LRGPYEKMFSIN-DSGHI----SIVDLSALNTSTIQLVVVATDTGNPPRQASVPAIM--- 234
            L+     +F++   +G +    +++D  AL  S   LVV   D G PP  A+V   +   
Sbjct: 3603 LKASEPGLFAVGLHTGEVRTARALLDRDALKQS---LVVAVQDHGQPPLSATVTLTVAVA 3659

Query: 235  -HFPEAIVQQASSKLNSGTSSTVLII------LGVVLIVLGFVIILLILYIHK 280
               P+ +    S +       + L +        V  + L FVI+LL L + +
Sbjct: 3660 DSIPDVLADLGSIRTPGDPDDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLRR 3712



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 52/204 (25%), Positives = 88/204 (43%), Gaps = 17/204 (8%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSN--DYGERFS--ISRQGDI 97
           F ++ Y VS  E +P  + +L VT    ++  +  + Y   N  +  E+F     R G+I
Sbjct: 242 FIQDIYKVSLQEGVPRGFSVLRVTATDQDEGVNAEITYSFHNVDELVEQFFNLDKRTGEI 301

Query: 98  SLMQCLDYETEDSYRFTVYATDTL-MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
           +     D+E  +SY F+V A D   +    ++ + +++ ND  P          LP    
Sbjct: 302 TTKDDFDFEIANSYTFSVEAKDPGDLAAHCSIQVEILDENDCAPEVIITSVFTPLPE--- 358

Query: 157 ADLTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSINDSGHISIVDLSALNTSTI-- 212
            D  PG+VI  ++  D D G+   V   + G  E +       +  +V    L+   I  
Sbjct: 359 -DSPPGTVIALIKTRDRDSGENGEVYCRILGRAEFILKSYSKNYYKLVTDGPLDREEIPE 417

Query: 213 -QLVVVATDTGNPPRQASVPAIMH 235
             + V+ATD G PP  +S    +H
Sbjct: 418 YNITVLATDRGKPPLSSSTSITLH 441



 Score = 45.8 bits (107), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 56/219 (25%), Positives = 94/219 (42%), Gaps = 25/219 (11%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRDL----RVKYWL-SNDYGER-----FSISRQ 94
           F +  Y V   EN P    +  V+ + P DL    RV Y + ++D   R      S+S Q
Sbjct: 452 FGQAFYLVHVAENNPPGASIAQVSASDP-DLGPNGRVSYSIVASDLEPRALASYVSVSAQ 510

Query: 95  GDISLMQ-CLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQY--- 147
             +   Q   D+E   ++  T+ A D     ++ + ++ + V + ND  PR  YP     
Sbjct: 511 SGVVFAQRAFDHEQLRAFELTLQARDQGSPALSANVSLRVLVDDRNDNAPRVLYPALGPD 570

Query: 148 -ELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-DSGHISIV 202
                  +P A   PG ++ KV A D D G    LS   L+     +FS+   +G +   
Sbjct: 571 GSALFDTVPRA-AQPGYLVTKVVAVDADSGHNAWLSYHVLQASEPGLFSLGLRTGEVRTA 629

Query: 203 D-LSALNTSTIQLVVVATDTGNPPRQASVPAIMHFPEAI 240
             L   + +  +L+V   D G PP  A+   ++ F +++
Sbjct: 630 RALGDRDAARQRLLVAVRDGGQPPLSATATLLLVFADSL 668



 Score = 45.8 bits (107), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 56/219 (25%), Positives = 94/219 (42%), Gaps = 25/219 (11%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDL----RVKYWL-SNDYGER-----FSISRQ 94
            F +  Y V   EN P    +  V+ + P DL    RV Y + ++D   R      S+S Q
Sbjct: 1907 FGQAFYLVHVAENNPPGASIAQVSASDP-DLGPNGRVSYSIVASDLEPRALASYVSVSAQ 1965

Query: 95   GDISLMQ-CLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQY--- 147
              +   Q   D+E   ++  T+ A D     ++ + ++ + V + ND  PR  YP     
Sbjct: 1966 SGVVFAQRAFDHEQLRAFELTLQARDQGSPALSANVSLRVLVDDRNDNAPRVLYPALGPD 2025

Query: 148  -ELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-DSGHISIV 202
                   +P A   PG ++ KV A D D G    LS   L+     +FS+   +G +   
Sbjct: 2026 GSALFDTVPRA-AQPGYLVTKVVAVDADSGHNAWLSYHVLQASEPGLFSLGLRTGEVRTA 2084

Query: 203  D-LSALNTSTIQLVVVATDTGNPPRQASVPAIMHFPEAI 240
              L   + +  +L+V   D G PP  A+   ++ F +++
Sbjct: 2085 RALGDRDAARQRLLVAVRDGGQPPLSATATLLLVFADSL 2123



 Score = 45.1 bits (105), Expect = 0.065,   Method: Compositional matrix adjust.
 Identities = 52/209 (24%), Positives = 86/209 (41%), Gaps = 17/209 (8%)

Query: 30   TLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYG 86
            +L+V       +  +     Y ++  EN+PV   LLTV     ++  +  V Y       
Sbjct: 3221 SLVVQTGDDGAKYPELVLERYQITVPENVPVGTRLLTVHAVDLDEGVNGEVTYSFRKITQ 3280

Query: 87   ERFSI----SRQGDISLMQCLDYETEDSYRFTVYATDTLMT-TSATVNISVVNVNDWDPR 141
            +   I       G++S ++ LDYE    Y   V A D   + T A V I++++VND  P 
Sbjct: 3281 KILQIFQLNPHTGELSTLEGLDYEEFSYYEMQVQAQDGAGSMTRAKVMITILDVNDNAPE 3340

Query: 142  FRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDR----VTLSLRGPYEKMFSINDSG 197
                     +P     D  PG+++      D D G       T+S   P++   SI++  
Sbjct: 3341 VTVTSVSNSIPE----DTPPGAIVALFYLQDRDSGKNGEVTCTISENLPFKLERSIDNYY 3396

Query: 198  HI-SIVDLSALNTSTIQLVVVATDTGNPP 225
             + +  +L     S   + + ATD G PP
Sbjct: 3397 RLMTAKNLDREKCSVYNITLKATDGGTPP 3425



 Score = 43.1 bits (100), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 62/232 (26%), Positives = 100/232 (43%), Gaps = 29/232 (12%)

Query: 13   LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKP 72
            LV+ A+   +  R + A ++V     +     F++  Y VS  ENLPV   +LTV     
Sbjct: 2479 LVLTAVDGGDPIRSSTARILVIVLDANDNAPVFTQPVYRVSIPENLPVGTPVLTVNATDQ 2538

Query: 73   RD----------LRVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDTL- 121
             +          LRV   +S  +    S    G+IS    LDYE    Y   + A D   
Sbjct: 2539 DEGVHAEVTYSFLRVTEKISKIFCLNIST---GEISTSANLDYEDSRFYELDIEARDRPG 2595

Query: 122  MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLT-PGSVIGKVEAADGDKGDR-- 178
            +   A V I++++VND       P+  +      +A+ T PG+VI   +  D D G    
Sbjct: 2596 LLDRAKVFITILDVND-----NVPEVVVTSGSRSVAESTPPGTVIALFQVYDRDSGQNGL 2650

Query: 179  --VTLSLRGPYEKMFSINDSGHISIVDLSALNTSTIQL---VVVATDTGNPP 225
               ++S   P+E   S+++  +  +V  + L+   + L    + ATD G PP
Sbjct: 2651 VTCSISRNMPFELEKSVDN--YYQLVTNTVLDREQVSLYNITITATDKGIPP 2700


>gi|198421140|ref|XP_002120840.1| PREDICTED: hypothetical protein, partial [Ciona intestinalis]
          Length = 2746

 Score = 65.1 bits (157), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 64/191 (33%), Positives = 91/191 (47%), Gaps = 21/191 (10%)

Query: 56   ENLPVNYVLLTVTTNKPRD----LRVKYWLSNDYGERFSISRQ-GDISLMQCLDYETEDS 110
            E+  V   + TVT N  RD    +   +    + G  FSI R  G I L + LD+E  ++
Sbjct: 1559 EDTAVGSHITTVTAND-RDASPIISFSFPRGGNPGSHFSIDRNDGKIYLNKALDFEIIEN 1617

Query: 111  YRFTVYATDTLMTTSATVN----ISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIG 166
            +  TV A+D  +  +  V+    + V +VND  P FR   Y   LP +      P S + 
Sbjct: 1618 FSITVQASDVGLNVTHNVSEELYVVVTDVNDNSPVFRQQSYHTLLPELS----PPHSHVI 1673

Query: 167  KVEAADGDKGD--RVTLSLRG--PYEKMFSIN-DSGHISIVDLSALN--TSTIQLVVVAT 219
             VEA D D G+  R+T  L    P + +F I+ D+G I+     ALN  +S   L + A 
Sbjct: 1674 TVEATDLDSGENGRITYRLDNVLPNKPIFVIDPDTGEITTNKSEALNPQSSVFNLEIEAF 1733

Query: 220  DTGNPPRQASV 230
            D G PPR  SV
Sbjct: 1734 DHGVPPRVQSV 1744



 Score = 61.2 bits (147), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 66/206 (32%), Positives = 98/206 (47%), Gaps = 23/206 (11%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLS-NDYGERFSIS-RQGDIS 98
             F +  Y    +E   +  ++  VT    +   +  V Y L  +   E F I    G I+
Sbjct: 888  HFERETYEAEVIEGQSIGTIVTRVTALDEDSGENGIVTYELQPSSETEAFLIDPTNGVIT 947

Query: 99   LMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRF------RYPQYEL 149
            L   LD E + SYR TV+A D    ++    TV ++++++ND  P+F      R P    
Sbjct: 948  LTMELDRENKSSYRLTVFAQDNSFPVLYDWCTVVVTLIDINDNTPQFSPLDGTRQPP--- 1004

Query: 150  FLPHIPLADLTPG-SVIGKVEAADGDKGD--RVTLSLRGP-YEKMFSIN-DSGHISIVD- 203
             L  + + +   G  V+  + A+D D GD  RVT S+ G      FS+N  SG +SI   
Sbjct: 1005 LLARLEIPEHMDGPQVVHTIAASDDDAGDNGRVTYSISGGNIGGDFSLNPSSGELSITRR 1064

Query: 204  LSALNTSTIQLVVVATDTGNPPRQAS 229
            L   +TS+ QL VVA+D G P R AS
Sbjct: 1065 LDRESTSSYQLQVVASDNGEPVRSAS 1090



 Score = 44.3 bits (103), Expect = 0.088,   Method: Compositional matrix adjust.
 Identities = 54/192 (28%), Positives = 89/192 (46%), Gaps = 12/192 (6%)

Query: 45  FSKNEYSVSALENLPV-NYVLLTVTTNKPRDLRVKYWLSNDYGERFSISRQ-GDISLMQC 102
           F+K  Y  S  ENL   + V +   T+   +  V Y  + D   +FSI+R  G ++ +  
Sbjct: 363 FTKQTYKFSIEENLAGGSEVGIVSATDVDANDDVFYTFAVD-SNKFSINRATGVVTTLVP 421

Query: 103 LDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL--ADLT 160
           LD++    +   V A+D      + + I+V ++ND  P+F     E    H+ +   D  
Sbjct: 422 LDHDIIKEHSLLVQASDGKHLAESMLRITVNDINDNSPQFLMTSSE----HLAVVSVDSE 477

Query: 161 PGSVIGKVEAADGDK--GDRVTLSLRGPYEKMFSINDSGHISIVDLSALNTSTIQLVVVA 218
            GS +  ++AAD D     +V+ ++     +MF I D    SI+  +AL T    + V A
Sbjct: 478 IGSWVASLKAADKDSNLNGQVSYTMTSQDNQMFRI-DGNTGSIMVNTALLTGLYTVHVNA 536

Query: 219 TDTGNPPRQASV 230
            D G+P R  S 
Sbjct: 537 QDQGSPSRHESA 548



 Score = 44.3 bits (103), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 34/106 (32%), Positives = 55/106 (51%), Gaps = 9/106 (8%)

Query: 76   RVKYWLSN-DYGERFSIS-RQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNI 130
            RV Y +S  + G  FS++   G++S+ + LD E+  SY+  V A+D    + + S  ++I
Sbjct: 1036 RVTYSISGGNIGGDFSLNPSSGELSITRRLDRESTSSYQLQVVASDNGEPVRSASGLIDI 1095

Query: 131  SVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG 176
            +V++ ND DP+F    Y   +       LT G  +  V A D D G
Sbjct: 1096 TVLDWNDNDPQFTETAYSGQVEE----GLTKGQYVLTVRATDADIG 1137



 Score = 43.5 bits (101), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 56/214 (26%), Positives = 88/214 (41%), Gaps = 32/214 (14%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTTNKPR---DLRVKYWLSNDYGERFSISRQGDISLM 100
            QF++  YS    E L     +LTV         +  V Y++S    E   +S Q  +  M
Sbjct: 1106 QFTETAYSGQVEEGLTKGQYVLTVRATDADIGLNGEVSYFISTTATESNVLSGQFSVDTM 1165

Query: 101  Q-------CLDYETEDSYRFTVYATDTL----MTTSATVNISVVNVNDWDPRFRYPQYEL 149
                     LD E + SY F V A D       ++   V I+V +VND  P F      L
Sbjct: 1166 TGVLTTSTTLDREVKGSYNFFVTAVDAAPYGPRSSMVPVTITVTDVNDNPPVF---DESL 1222

Query: 150  FLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSGHISIVDLSALNT 209
             L +I  + ++PG  + +V A D D G    ++ R   E  F  N S + ++ ++  ++ 
Sbjct: 1223 ILVNISRS-ISPGMEVARVRATDADSGLYGEVTYRCVVEYRFG-NSSANQTLFEIDRVHG 1280

Query: 210  -------------STIQLVVVATDTGNPPRQASV 230
                         +   L+V+A+D G  P Q S 
Sbjct: 1281 NIRMRESIPSNFPAQSSLMVIASDGGVRPLQTSA 1314



 Score = 42.0 bits (97), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 38/108 (35%), Positives = 50/108 (46%), Gaps = 13/108 (12%)

Query: 95  GDISLMQCLDYETEDSYRFTVYATD----TLMTTSATVN----ISVVNVNDWDPRFRYPQ 146
           G + L + LD+ET+D Y F V AT     ++   S  VN    I V +VND  P F    
Sbjct: 308 GSLYLNKPLDHETQDFYTFKVTATGFPSVSIFADSCYVNADVTIDVTDVNDNSPIFTKQT 367

Query: 147 YELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSIN 194
           Y+  +      +L  GS +G V A D D  D V  +      K FSIN
Sbjct: 368 YKFSIEE----NLAGGSEVGIVSATDVDANDDVFYTFAVDSNK-FSIN 410



 Score = 42.0 bits (97), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 58/119 (48%), Gaps = 16/119 (13%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKP---RDLRVKYW--LSNDYGERFSI------SR 93
            FS+++Y  S  E+   ++ ++ VT       RD  V  +  +S + G  F I       +
Sbjct: 1760 FSRSQYEASVSESASRDFSIINVTATDADYSRDNNVIMYRIISGNTGGAFKIRTLNGPGK 1819

Query: 94   Q--GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQY 147
            Q  G++ +   LD ET D Y   V A D     ++++ATV I+V +VND  PRF    Y
Sbjct: 1820 QTLGELCVAGDLDRETTDRYFLIVAAIDQGTPSLSSNATVVINVRDVNDNRPRFNKTSY 1878



 Score = 40.8 bits (94), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 47/196 (23%), Positives = 83/196 (42%), Gaps = 6/196 (3%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSND--YGERFSISRQGDISLMQC 102
           F+++ Y   A E+  ++ VL  V+        V Y++ +D      F++   GD+ +   
Sbjct: 52  FTQSRYLFRASEDADISDVLGRVSAAAEDGGSVTYFIRHDPPRSSWFAVRSNGDVIVTSQ 111

Query: 103 LDYETEDSYRFTVYATDTL--MTTSATVNISVVNVNDWDPRF-RYPQYELFLPHIPLADL 159
           +D E   +  F V A+     +   A V + + +VND  P F    +  L    IP   L
Sbjct: 112 MDREVFSTVSFQVIASSGTPPIFGFAMVTVEISDVNDNAPHFLSSTEGALGSVTIPYTTL 171

Query: 160 TPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSGHISIVDLSALNTSTIQLVVVAT 219
             G V   V A D D+G    ++ R   +      ++G I++      +T+   L + A 
Sbjct: 172 VGGKV-HSVVAVDDDQGRNGQVNYRLQSDFFMVDENTGVITLSRELPQHTTDYSLNIEAY 230

Query: 220 DTGNPPRQASVPAIMH 235
           D G PP+      ++H
Sbjct: 231 DEGEPPQVTQANLLIH 246



 Score = 40.0 bits (92), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 49/179 (27%), Positives = 82/179 (45%), Gaps = 19/179 (10%)

Query: 54  ALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRF 113
           A  N  V Y +++VT++  R +    +   D          G +++ + LDYE   ++  
Sbjct: 805 AGTNGRVVYSIVSVTSDIGRSIEEMSYFHVD-------PNTGVLTVAKQLDYERSKTHFI 857

Query: 114 TVYATDTL---MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEA 170
            V A+D      TT     I V +VND  P F    YE  +    +   + G+++ +V A
Sbjct: 858 NVSASDLAPQPQTTYQMFTIHVTDVNDIAPHFERETYEAEV----IEGQSIGTIVTRVTA 913

Query: 171 ADGDKGDR--VTLSLRGPYE-KMFSINDS-GHISI-VDLSALNTSTIQLVVVATDTGNP 224
            D D G+   VT  L+   E + F I+ + G I++ ++L   N S+ +L V A D   P
Sbjct: 914 LDEDSGENGIVTYELQPSSETEAFLIDPTNGVITLTMELDRENKSSYRLTVFAQDNSFP 972


>gi|339258504|ref|XP_003369438.1| putative cadherin domain protein [Trichinella spiralis]
 gi|316966323|gb|EFV50917.1| putative cadherin domain protein [Trichinella spiralis]
          Length = 2240

 Score = 65.1 bits (157), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 52/196 (26%), Positives = 95/196 (48%), Gaps = 10/196 (5%)

Query: 56   ENLPVNYVLLTVTTNKPRD---LRVKYWLSNDYGERFSISR-QGDISLMQCLDYETEDSY 111
            E++PV   + +VT N       L   +    + GE F I +  G I L + LDYE +  +
Sbjct: 1521 EDIPVGSFIASVTANDVDSFPALTYHFTEKGNPGEFFKIDKFSGQIMLAKRLDYEKQSIH 1580

Query: 112  RFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAA 171
               + A D +        I ++++ND  P F +  +++FL    L  +  GS IG++ A 
Sbjct: 1581 TLEIQAYDGIHYAFVKQIIQLIDINDNAPTFSHAVHQIFL---SLGSVQ-GSTIGRITAV 1636

Query: 172  DGDKGD--RVTLSLRGPYEKMFSINDSGHISIVDLSALNTSTIQLVVVATDTGNPPRQAS 229
            D D G+  R+T  L    +  F+   S  ++  ++   + +  +L+V A+D G P R + 
Sbjct: 1637 DEDGGENGRITYKLLKINDLNFARLKSTPLTTPEIWIDSNTVFKLIVEASDNGKPQRSSR 1696

Query: 230  VPAIMHFPEAIVQQAS 245
            +P ++    + VQ+A+
Sbjct: 1697 LPVVVQIHFSPVQEAA 1712



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 49/149 (32%), Positives = 72/149 (48%), Gaps = 14/149 (9%)

Query: 89   FSISRQGDISLMQCLDYETEDSYRF--TVYATDTLMTTSAT-VNISVVNVNDWDPRFRYP 145
            F I   G + +M+ LD E  D Y F  T+ + +  +  S T V I V +VND  P F +P
Sbjct: 1727 FEIDALGRLIVMKPLDREKVDKYHFVATIESHEFGVENSTTNVIIYVEDVNDNAPVFSHP 1786

Query: 146  QYELFLPHIPLADLTP-GSVIGKVEAADGDKGDRVTLSLR---GPYEKMFSINDSGHISI 201
            +Y     HI + +  P GSVI K+ A+D D G    L      G  E  F+I +S  +  
Sbjct: 1787 EY-----HISVNESMPVGSVIMKLSASDEDIGVNSLLHFEITSGNTESTFAIENSTGVIK 1841

Query: 202  VDLSALNTST--IQLVVVATDTGNPPRQA 228
            +     NT     +L++  TD+G P R +
Sbjct: 1842 LQKKLDNTKINHYKLILKVTDSGVPARSS 1870



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 38/128 (29%), Positives = 68/128 (53%), Gaps = 12/128 (9%)

Query: 56   ENLPVNYVLLTVTTNKPRDL--RVKYWL--SNDYGERFSISRQGDISLMQCLDYETEDSY 111
            EN+ +N ++    T++  DL  R+ Y +   ND GE+F+I+ Q  +   + LD E+   Y
Sbjct: 1118 ENVHMNNLVTIYATDRDSDLNARIVYSIVGGND-GEKFNINPQSGLVSCKALDRESRSQY 1176

Query: 112  RFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKV 168
              T+ ATD   + +  S  + ++V + ND  P+F+   Y + +    + D  PG+ + K+
Sbjct: 1177 NLTILATDSGVSRLADSCNLIVTVSDENDNVPKFQSDVYSIDV----VEDARPGTTVLKL 1232

Query: 169  EAADGDKG 176
             A D D+G
Sbjct: 1233 TADDFDEG 1240



 Score = 40.4 bits (93), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 46/148 (31%), Positives = 69/148 (46%), Gaps = 18/148 (12%)

Query: 94  QGDISLMQCLDYETEDSYRFTVYATDTL------MTTSATVNISVVNVNDWDPRFRYPQY 147
           +G + L   LDYE    Y   V ATD        ++T  T  I VV+VND  P F     
Sbjct: 842 RGVLQLQSELDYEKCTEYVIVVEATDQASSPYDRLSTQVTTRIYVVDVNDNSPNF----- 896

Query: 148 ELFLPHIPLADLTPGSV-IGKVEAADGD--KGDRVTLSLRGP-YEKMFSIN-DSGHISIV 202
            +    + + + +P    +  V A D D  +  RVT S++       F+IN D+G +++ 
Sbjct: 897 -ISNSTVEIYEDSPTDYPLFYVIATDADWLENGRVTYSIKDRNVNSKFAINADTGALTLT 955

Query: 203 -DLSALNTSTIQLVVVATDTGNPPRQAS 229
             L+  + +  QL V ATD G PP  A+
Sbjct: 956 RRLTKDDPNHYQLTVKATDHGKPPLSAT 983



 Score = 38.9 bits (89), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 53/198 (26%), Positives = 81/198 (40%), Gaps = 24/198 (12%)

Query: 45  FSKNEYSVSALENLPVN-YVLLTVTTNKPRDLR--VKYWLSNDYGERFSISRQGDISLMQ 101
           F    Y  S  EN P   +V   V  +    L   V+Y L ++  + F +S  G +    
Sbjct: 452 FESAAYEFSVEENQPKGTFVGQVVAHDADFGLNGTVRYRLDSEQVKIFHVSLDGKLITSG 511

Query: 102 CLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYE---LFLPHIP 155
            LDYE  D Y   + A D     ++T+  V + V +VND  P F  P  +   LF     
Sbjct: 512 VLDYELTDLYELQIIAYDGGIPSLSTTCKVIVHVKDVNDNAPFFILPTRQDNILF----- 566

Query: 156 LADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKM-----FSINDSGHI----SIVDLSA 206
             + + G+ + +V+A D D G   T+  R   E       F IN    I     ++D   
Sbjct: 567 REEQSSGTEVIQVQARDPDSGRNGTVRYRLDAESSTPPMPFRINRRTGIIYSTEVLDYEK 626

Query: 207 LNTSTIQLVVVATDTGNP 224
              +  ++ V+A D G P
Sbjct: 627 -GPTIYKVTVIAEDWGKP 643


>gi|119514221|gb|ABL75884.1| protocadherin 2G9 [Takifugu rubripes]
          Length = 939

 Score = 65.1 bits (157), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 64/200 (32%), Positives = 100/200 (50%), Gaps = 21/200 (10%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKY---WLSNDYGERFSISRQ-GDI 97
           FS+  Y  S  EN PV  ++LT+T    ++  +  V Y    +S D    F I ++ GDI
Sbjct: 235 FSQAVYKASLQENSPVGTLILTLTATDADEGVNGEVVYDFGHISEDIKSIFRIDQKTGDI 294

Query: 98  SLMQCLDYETEDSYRFTVYATDTL-MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
            LM  +D+ET   +   V A D L +T+ A V I V +VND  P          +P    
Sbjct: 295 ELMTMVDFETTSIFELRVTAKDGLGLTSYAKVIIDVTDVNDNPPVIYVKSMSSQIPE--- 351

Query: 157 ADLTPGSVIG--KVEAADGDKGDRVTLSLRG--PYEKMFSINDSGHISIVDLSALN---T 209
            D++PGS +G   V+  D +K  +V  S++G  P++ + SI +  + S+V    L+    
Sbjct: 352 -DVSPGSEVGIINVQDRDSEKNRQVRCSIQGNVPFKLVPSIKN--YYSLVTTGQLDRELV 408

Query: 210 STIQLVVVATDTGNPPRQAS 229
           S   + + ATD G+PP  +S
Sbjct: 409 SDYNITISATDEGSPPLSSS 428



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 71/272 (26%), Positives = 116/272 (42%), Gaps = 35/272 (12%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRDLR----VKYWL--SNDYGERFS--ISRQGD 96
           F +  YS    EN      L +V+   P D R    V Y L  +   G   S  +S  GD
Sbjct: 445 FEEESYSAYVSENNRAGSTLCSVSAGDP-DWRQNGTVIYSLLAAEVNGAPVSSYVSVNGD 503

Query: 97  ISLMQC---LDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYE-- 148
             L+      DYE   S++  V A D     ++++ TV++ + +VND  P+  YP  E  
Sbjct: 504 TGLIHAVRSFDYEQLRSFKVHVMARDNGSPPLSSNVTVSVFISDVNDNSPQILYPAPEGN 563

Query: 149 LFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-DSGHISIV-D 203
            F+  +       GS++ KV A D D G    LS   ++     +FSI   SG I    D
Sbjct: 564 SFMTELVPKAAHGGSLVSKVIAVDADSGQNAWLSYHIVKSSDPGLFSIGVHSGEIRTQRD 623

Query: 204 LSALNTSTIQLVVVATDTGNPPRQASVPAIMHFPEAIVQ----------QASSKLNSGTS 253
           +S  ++    L+V   D G P   A+    +   + + +          + +SKL   TS
Sbjct: 624 ISESDSMKQNLIVAVKDNGQPSLSATCSMYLLISDNLAEVPELKDISYDEKNSKL---TS 680

Query: 254 STVLIILGVVLIVLGFVIILLILYIHKNKHTK 285
             ++ ++ V    L F+II+L +   + +  +
Sbjct: 681 YLIIALVSVSTFFLTFIIIILGVRFCRRRKPR 712


>gi|115666275|ref|XP_785445.2| PREDICTED: protein dachsous-like [Strongylocentrotus purpuratus]
          Length = 3342

 Score = 65.1 bits (157), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 68/229 (29%), Positives = 105/229 (45%), Gaps = 16/229 (6%)

Query: 13   LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALEN-LPVNYVLLTVTTNK 71
            LV+ A  +    R A  TL +     + +  +F ++ Y ++  E+  P  YV + V  + 
Sbjct: 1624 LVILATDHGTVQRMATQTLTIRVIDVNDQPPRFEQSIYVMNVSESQAPGTYVGMVVAIDG 1683

Query: 72   PRDL--RVKYWLSNDYGE-RFSI-SRQGDISLMQCLDYETEDSYRFTVYATDTLMTTS-- 125
               +  R+ Y L  +     F I +  G+I     LD E  DSY  TVYA D        
Sbjct: 1684 DSGVNGRITYELPEEIARGMFRINATTGEIRTKAILDREQRDSYVVTVYAMDGAFPARYD 1743

Query: 126  -ATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKV--EAADGDKGDRVTLS 182
             ATV + V++VND +P F  P +++ LP     + +PG +   +  +A +G  GD +   
Sbjct: 1744 MATVLVYVMDVNDNNPTFAPPTFDITLPE----NQSPGVIHNAIATDADEGPNGDLIYSI 1799

Query: 183  LRGPYEKMFSINDS-GHISIVD-LSALNTSTIQLVVVATDTGNPPRQAS 229
              G  +  FSIN S G I  V  L   + +T  L + ATD G  PR  +
Sbjct: 1800 TGGDPKNAFSINQSTGAIFTVGALDREDEATYTLTITATDQGTSPRSGT 1848



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 57/196 (29%), Positives = 98/196 (50%), Gaps = 17/196 (8%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLS-NDYGERFSI-SRQGDISL 99
            F+   Y VS LENLP++  ++ V     ++  +  + Y L+ N+    F++  R+G +  
Sbjct: 1031 FTMGFYPVSILENLPISTPVVQVEATDNDRGANALITYTLTPNNDSPYFAVFPREGWLYT 1090

Query: 100  MQCLDYETEDSYRFTVYATDTL---MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
             Q LD E + ++  T+ A+D+      +SATV ++VV+ ND  P F    Y   +     
Sbjct: 1091 RQVLDRELKSTFTLTIMASDSGSPPQNSSATVQVTVVDANDNAPHFTKKSYHFHINE--- 1147

Query: 157  ADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDSGHISIVD-LSALNTSTIQ 213
             +L  G+ + +VEA D D G   +VT +L    +  F+I++ G I     L      + +
Sbjct: 1148 -NLPAGTEVDRVEAVDPDLGPNGQVTYTLSPSGD--FTIDEEGVIRTTHPLDREAAYSYR 1204

Query: 214  LVVVATDTGNPPRQAS 229
            L++ A D GNP   +S
Sbjct: 1205 LIIRAVDGGNPALSSS 1220



 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 58/201 (28%), Positives = 98/201 (48%), Gaps = 20/201 (9%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTN----KPRDLRVKYWL--SNDYGERFSI-SRQGDI 97
            F ++ YS S  EN+ + + ++TV        P + ++ Y++   ND G +F I +  G I
Sbjct: 2492 FVEDIYSASVSENVSLGHHVITVVAEDMDLSPENSKINYFIESGNDQG-KFKIDANDGSI 2550

Query: 98   SLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHI 154
            ++++ LD E  D+Y   + A D    +   +A V I V ++ND  P F + QYE  +   
Sbjct: 2551 TVLERLDREATDTYTLIIGAVDNGEPVNNATAEVVIEVEDINDHSPIFDHVQYEGRIAE- 2609

Query: 155  PLADLTPGSVIGKVEAADGDKG--DRVTLS-LRGPYEKMFSIN-DSGHISIV-DLSALNT 209
               + T  + I  V A D D G    V  S + G Y  +F+I+  SG +++  +L     
Sbjct: 2610 ---NATASTYILTVHATDRDIGYNGEVEYSIISGTYSDLFAIDVVSGAVTVRGELDREEV 2666

Query: 210  STIQLVVVATDTGNPPRQASV 230
              ++  V A+D G   + ASV
Sbjct: 2667 ERVEFTVQASDRGMENQLASV 2687



 Score = 52.4 bits (124), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 69/229 (30%), Positives = 100/229 (43%), Gaps = 17/229 (7%)

Query: 11   ITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTN 70
             TL + A    +  + + AT+ V+    +     F+K  Y     ENLP    +  V   
Sbjct: 1102 FTLTIMASDSGSPPQNSSATVQVTVVDANDNAPHFTKKSYHFHINENLPAGTEVDRVEAV 1161

Query: 71   KPRDL----RVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDT---LMT 123
             P DL    +V Y LS      F+I  +G I     LD E   SYR  + A D     ++
Sbjct: 1162 DP-DLGPNGQVTYTLSP--SGDFTIDEEGVIRTTHPLDREAAYSYRLIIRAVDGGNPALS 1218

Query: 124  TSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTL 181
            +SATV I+V ++ND  P F   Q   +   +   +   G  +  + A D D G    ++ 
Sbjct: 1219 SSATVYINVNDLNDNAPVFS--QDRTYQASV-REEQPAGEFVAWIIATDTDSGVLGNISY 1275

Query: 182  SLRGPYEKMFSINDSGHISIVD-LSALNTSTIQLVVVATDTGNPPRQAS 229
            SL     K F I+ SG IS    +   + S   L V+A D GNPP QA+
Sbjct: 1276 SLIDSSPK-FIIDSSGVISTAAAIDREDESYYTLTVLAQDGGNPPMQAT 1323



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 59/182 (32%), Positives = 93/182 (51%), Gaps = 14/182 (7%)

Query: 52   VSALENLPVNYVLLTVT-TNKPRDLRVKYWLSN--DYGERFSISR-QGDISLMQCLDYET 107
            VS  E+L V   + TVT T+   +  ++Y  ++  + G  F+I +  G I+L + LD ET
Sbjct: 2294 VSVSEDLGVGLSVTTVTATDSDTNPNIQYSFTSTGNPGGYFAIDQYSGIITLARSLDRET 2353

Query: 108  EDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGK 167
            +D Y   + ATDT  TT+ T+ + V + ND  P FR   Y++ LP +      P   +  
Sbjct: 2354 QDGYTLELEATDTEYTTTMTLEVIVTDENDNAPVFRQESYQVTLPEL----TQPNVAVVA 2409

Query: 168  VEAADGDKG--DRVTLSLRGPYEKMFSINDSGHI---SIVDLSALNTSTIQLVVVATDTG 222
            V A+D D G    +T S    +   +    +G I    +++ + + T TIQL V ATD+G
Sbjct: 2410 VNASDKDIGLNAELTYSFVDSHPSFYIDPITGVIFTNQVIEFNDVET-TIQLYVTATDSG 2468

Query: 223  NP 224
             P
Sbjct: 2469 AP 2470



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 48/157 (30%), Positives = 75/157 (47%), Gaps = 19/157 (12%)

Query: 51   SVSALENLPVNY-VLLTVTTNKP--RDLRVKYWL-SNDYGERFSISR-QGDISLMQCLDY 105
            S   +E+ PV + V+  + T++    + RV Y + S +   +FS+    G +++   LD+
Sbjct: 1557 STDVMEDEPVGFNVIHIIATDEDSGENGRVGYTITSGNEDGKFSLDAVTGLLTIAHSLDH 1616

Query: 106  ETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPG 162
            E +  Y   + ATD        + T+ I V++VND  PRF    Y + +         PG
Sbjct: 1617 EHKRDYELVILATDHGTVQRMATQTLTIRVIDVNDQPPRFEQSIYVMNVSE----SQAPG 1672

Query: 163  SVIGKVEAADGDKG--DRVTLSLRGPYE---KMFSIN 194
            + +G V A DGD G   R+T  L  P E    MF IN
Sbjct: 1673 TYVGMVVAIDGDSGVNGRITYEL--PEEIARGMFRIN 1707



 Score = 44.7 bits (104), Expect = 0.088,   Method: Compositional matrix adjust.
 Identities = 53/201 (26%), Positives = 90/201 (44%), Gaps = 26/201 (12%)

Query: 95   GDISLMQCLDYETEDSYRFTVYATDT-LMTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
            G++      DYE+ +SYRF V A DT  ++ S    +++ +V+++ P F   +Y     +
Sbjct: 2762 GEVFTAAVFDYESANSYRFVVQAQDTGGLSISIQTEVNITSVDEFPPMFNDQEY-----Y 2816

Query: 154  IPLAD-LTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSGHISIVDLSALNTSTI 212
              + D    G  +G+V A D D G+   +     +E  +    +G I +     LN+S  
Sbjct: 2817 FEIGDGADAGDYVGQVTATDADGGEDGVVIYSLTHEFFYIEATTGIIKVA--KPLNSSAR 2874

Query: 213  QLVVVATD-TGNPPRQASVPAIMHFPEAIVQQ-------------ASSKLNSGTSSTVLI 258
            +   +    T    R+  + A  +F   I+               A S +N+ +S  V I
Sbjct: 2875 KRRGLEDRFTHRSRREIDLSAQSNFALKIIASTGKPGTLIDDTTAAVSVVNAASSIPVWI 2934

Query: 259  ILGVV---LIVLGFVIILLIL 276
            I  VV   LI+L FV+I +IL
Sbjct: 2935 IAIVVVAILIILLFVVIGIIL 2955



 Score = 44.3 bits (103), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 63/229 (27%), Positives = 95/229 (41%), Gaps = 27/229 (11%)

Query: 12   TLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTV-TTN 70
            TL + A       R    T+ V+    +  +  F    Y  S  E+  +N  +LTV  T+
Sbjct: 1832 TLTITATDQGTSPRSGTTTIRVTVTDLNDNDPVFGSMSYYKSIPESTAINATILTVVATD 1891

Query: 71   KPRDLR--VKYWLSNDYGERFSIS-RQGDISLMQCLDYETEDSYRFTVYATDTLM----T 123
                L   V Y L N     FSI    G+I+     DYE E  Y F V ATD+ +    +
Sbjct: 1892 DDEGLNGDVYYTLDNTTIGLFSIDPEHGEITTTGKFDYEKETRYTFQVTATDSGVFGPRS 1951

Query: 124  TSATVNISVVNVNDWDPRFRYPQYELFLPHIPL-----ADLTPGSVIGKVEAADGDKGDR 178
                V I + +VND  P F+          IP+      D +  + +  VEA D D G  
Sbjct: 1952 ERVQVIIDISDVNDNAPVFK---------TIPIRANVTQDASSNTFVANVEADDKDSGVN 2002

Query: 179  VTLSLRGPYE-KMFSINDSGHISIVDLSALNTSTI--QLVVVATDTGNP 224
              ++ R   +   F+I+      ++   +LN  T+   L V+A D G+P
Sbjct: 2003 GEVNYRFTQQSSSFAIDTV--TGVITTKSLNPGTLFYHLEVMAFDLGSP 2049



 Score = 42.7 bits (99), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 47/164 (28%), Positives = 82/164 (50%), Gaps = 17/164 (10%)

Query: 77   VKYWLSNDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISV 132
            V+Y L+++ G  F I    G+I L + + Y  + S+   + A D     +  S T+ + +
Sbjct: 962  VRYRLTSNPGNTFRIVEATGEIILNKEVSYNDQLSFEVDIQAYDAGEPSLEGSLTLTVII 1021

Query: 133  VNVNDWDPRFRYPQYEL-FLPHIPLADLTPGSVIGKVEAADGDKGDR--VTLSLR----G 185
            ++VND  P F    Y +  L ++P++  TP   + +VEA D D+G    +T +L      
Sbjct: 1022 LDVNDNGPVFTMGFYPVSILENLPIS--TP---VVQVEATDNDRGANALITYTLTPNNDS 1076

Query: 186  PYEKMFSINDSGHISIVDLSALNTSTIQLVVVATDTGNPPRQAS 229
            PY  +F      +   V L     ST  L ++A+D+G+PP+ +S
Sbjct: 1077 PYFAVFPREGWLYTRQV-LDRELKSTFTLTIMASDSGSPPQNSS 1119



 Score = 42.0 bits (97), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 47/172 (27%), Positives = 77/172 (44%), Gaps = 12/172 (6%)

Query: 13   LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNE-YSVSALENLPVN-YVLLTVTTN 70
            L++RA+   N    + AT+ ++    +     FS++  Y  S  E  P   +V   + T+
Sbjct: 1205 LIIRAVDGGNPALSSSATVYINVNDLNDNAPVFSQDRTYQASVREEQPAGEFVAWIIATD 1264

Query: 71   KPRDL--RVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDTL---MTTS 125
                +   + Y L  D   +F I   G IS    +D E E  Y  TV A D     M  +
Sbjct: 1265 TDSGVLGNISYSLI-DSSPKFIIDSSGVISTAAAIDREDESYYTLTVLAQDGGNPPMQAT 1323

Query: 126  ATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGD 177
            A+V + ++++ND  P      Y +F       ++ P +V+G V A+D D GD
Sbjct: 1324 ASVRVRILDLNDNVPIAAMSAY-IFTAD---ENIQPPTVVGVVSASDMDVGD 1371


>gi|431899578|gb|ELK07541.1| Cadherin EGF LAG seven-pass G-type receptor 1 [Pteropus alecto]
          Length = 964

 Score = 65.1 bits (157), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 61/229 (26%), Positives = 107/229 (46%), Gaps = 22/229 (9%)

Query: 13  LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTT--- 69
           L V A+ + +  R A   L V+ + T+     F ++EY     ENL V Y +LT+     
Sbjct: 38  LKVSAVDHGSPRRSAATYLTVTVSDTNDHSPVFEQSEYRERVRENLEVGYEVLTIRATDG 97

Query: 70  NKPRDLRVKYWLSNDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDT-----LMT 123
           + P +  ++Y L    G  F I +R G +     +D E   +Y+  V A D       ++
Sbjct: 98  DAPSNANMRYRLLEGAGGVFEIDARSGVVRTRAAVDREEAAAYQLLVEANDQGRNPGPLS 157

Query: 124 TSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS- 182
            +ATV+I V + ND  P+F   +Y + +P     D+   + + +V+A D D+G    +  
Sbjct: 158 ATATVHIVVEDENDNYPQFSEKRYVVQVPE----DVAVNTAVLRVQATDRDQGQNAAIHY 213

Query: 183 --LRGPYEKMFSIND-SGHISIV---DLSALNTSTIQLVVVATDTGNPP 225
             + G  +  F ++  SG + ++   D  A+   T++  + A D G PP
Sbjct: 214 SIVSGNLKGQFYLHSLSGSLDVINPLDFEAIREYTLR--IKAQDAGRPP 260



 Score = 51.6 bits (122), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 53/191 (27%), Positives = 89/191 (46%), Gaps = 14/191 (7%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRDLR--VKYWLSN-DYGERFSISRQ---GDIS 98
           F++  Y +   E+  V   +LT+  +  RD    + Y L+  +   RF++S Q   G I+
Sbjct: 405 FTQPVYELRLNEDAAVGSSVLTLRAHD-RDANSVITYQLTGGNTRNRFALSSQSGGGLIT 463

Query: 99  LMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLAD 158
           L   LDY+ E  Y   V A+D   + +A V I+V + N   P F+   Y + +      D
Sbjct: 464 LALPLDYKQERQYVLAVTASDGTRSHTAQVFINVTDANTHRPVFQSSHYTVSVSE----D 519

Query: 159 LTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSINDSGHI-SIVDLSALNTSTIQLV 215
              G+ I  + A+D D G+  R+T  L  P  +     DSG + ++ +L   + +   L 
Sbjct: 520 RPLGTSIATISASDEDTGENARITYVLEDPVPQFRIDPDSGTVYTMTELDYEDQAAYTLA 579

Query: 216 VVATDTGNPPR 226
           + A D G P +
Sbjct: 580 ITARDNGIPQK 590



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 73/167 (43%), Gaps = 30/167 (17%)

Query: 45  FSKNEYSVSALENLPVNYVLL---TVTTNKPRDLRVKYWL---------------SNDYG 86
           F  + +  + LEN+P+ + +L    V  +   + R++Y L                 D  
Sbjct: 282 FVSSPFQAAVLENVPLGHSVLHIQAVDADAGENSRLRYHLVDTGAASVGGTGAGSQEDPA 341

Query: 87  ERFSISRQ-----GDISLMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDW 138
              S   Q     G I++   LD E  + Y F V A D     M++SA+V+I+V++VND 
Sbjct: 342 SAASFPFQIHNSSGWITVCAELDREQVEHYSFGVEAVDHGSPPMSSSASVSITVLDVNDN 401

Query: 139 DPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRG 185
           DP F  P YEL L      D   GS +  + A D D    +T  L G
Sbjct: 402 DPIFTQPVYELRLNE----DAAVGSSVLTLRAHDRDANSVITYQLTG 444



 Score = 45.8 bits (107), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 40/148 (27%), Positives = 69/148 (46%), Gaps = 15/148 (10%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWL--SNDYGERFSISRQGDIS 98
           QFS+  Y V   E++ VN  +L V     ++ ++  + Y +   N  G+ +  S  G + 
Sbjct: 175 QFSEKRYVVQVPEDVAVNTAVLRVQATDRDQGQNAAIHYSIVSGNLKGQFYLHSLSGSLD 234

Query: 99  LMQCLDYETEDSYRFTVYATDT----LMTTSATVNISVVNVNDWDPRF-RYPQYELFLPH 153
           ++  LD+E    Y   + A D     L+ +S  V++ V++VND  P F   P     L +
Sbjct: 235 VINPLDFEAIREYTLRIKAQDAGRPPLINSSGLVSVQVLDVNDNAPLFVSSPFQAAVLEN 294

Query: 154 IPLADLTPGSVIGKVEAADGDKGDRVTL 181
           +PL     G  +  ++A D D G+   L
Sbjct: 295 VPL-----GHSVLHIQAVDADAGENSRL 317



 Score = 45.1 bits (105), Expect = 0.057,   Method: Compositional matrix adjust.
 Identities = 37/146 (25%), Positives = 68/146 (46%), Gaps = 9/146 (6%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWL-SNDYGERFSISR-QGDISL 99
           F ++E  +   EN PV  V+  +  N P +    ++ Y +   +  E F +    GD+  
Sbjct: 717 FERDELELFVEENSPVGSVVARIRANDPDEGPNAQIMYQIVEGNVPEVFQLDLLSGDLRA 776

Query: 100 MQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADL 159
           +  LD+E +  Y   V AT   + + ATV++ +++ ND  P    P +++   +      
Sbjct: 777 LVELDFEVQREYMLLVQATSAPLVSRATVHVRLLDQNDNPPVL--PDFQILFNNYVTNKS 834

Query: 160 T--PGSVIGKVEAADGDKGDRVTLSL 183
           +  P  VIG+V A D D  D ++ + 
Sbjct: 835 SSFPAGVIGRVPAHDPDLSDSLSYTF 860


>gi|403273767|ref|XP_003928672.1| PREDICTED: cadherin-23 [Saimiri boliviensis boliviensis]
          Length = 3354

 Score = 65.1 bits (157), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 59/195 (30%), Positives = 91/195 (46%), Gaps = 20/195 (10%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWLSNDYGERFSIS-RQGDISLM 100
            F +  Y  +  E++PV  ++LTVT           ++Y L +  G +F+I+   GDI ++
Sbjct: 2402 FDQPSYQEAVFEDVPVGTIILTVTATDADSGNFALIEYSLGDGEG-KFAINPTTGDIYVL 2460

Query: 101  QCLDYETEDSYRFTVYATDT-------LMTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
              LD E +D Y  T  A D            S  V I V++VND  P+F  PQ+   +  
Sbjct: 2461 SSLDREKKDHYILTALAKDNPGDVASNRRENSVQVVIQVLDVNDCRPQFSKPQFSTSV-- 2518

Query: 154  IPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIN-DSGHISIVDLSALNTS 210
                +   G+ +  + A D D+G    +T SL GP  + F ++ DSG ++       +  
Sbjct: 2519 --YENEPAGTSVITMMATDQDEGPNGELTYSLEGPGVEAFHVDVDSGLVT-TQRPLQSYE 2575

Query: 211  TIQLVVVATDTGNPP 225
               L VVATD G PP
Sbjct: 2576 RFNLTVVATDGGQPP 2590



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 65/210 (30%), Positives = 99/210 (47%), Gaps = 28/210 (13%)

Query: 45  FSKNEYSVSALENLPVNYVLLTV--TTNKPRDL-RVKYWLSNDYGERFSISRQ-GDISLM 100
           FS+  Y+VS  EN+ V   +LTV  T N       V Y+ S+D  +RFS+ +  G I L+
Sbjct: 460 FSQPLYNVSLYENVTVGTSVLTVLATDNDVGTFGEVNYFFSDD-PDRFSLDKDMGLIMLI 518

Query: 101 QCLDYETEDSYRFTVYATDTL-MTTSATVNISVVNVNDWDPRFRYPQYELFL----PHIP 155
             LDYE    +  TV A D     T+  V I+V++VND  P F+   Y   L    P + 
Sbjct: 519 ARLDYELIQRFTLTVIARDGGGEETTGRVRINVLDVNDNIPTFQKDSYVGALRENEPSV- 577

Query: 156 LADLTPGSVIGKVEAADGDK--GDRVTLSL-----RGPYEKMFSINDSGHISI---VDLS 205
                  + + ++ A D D    +++T S+      G Y  +      G IS+   +D  
Sbjct: 578 -------TQLVRLRATDEDSPPNNQITYSIVSASAFGSYFDISLYEGYGVISVSRPLDYE 630

Query: 206 ALNTSTIQLVVVATDTGNPPRQASVPAIMH 235
            +    I L+V+A D GNPP  ++VP  + 
Sbjct: 631 QIPNGLIYLMVMAKDAGNPPLNSTVPVTIE 660



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 66/218 (30%), Positives = 102/218 (46%), Gaps = 44/218 (20%)

Query: 45  FSKNEYSVSALENLPVNY-VLLTVTTNKPRDLRVKYWLSNDYGE-----------RFSI- 91
           FSK  Y VS +EN+     VL    T+  R        S +YG+           +F I 
Sbjct: 671 FSKPAYFVSVVENIMAGATVLFLNATDLDR--------SREYGQESIIYSLEGSAQFRIN 722

Query: 92  SRQGDISLMQCLDYETEDSYRFTVYATD-----TLMTTSATVNISVVNVNDWDPRFRYPQ 146
           +R G+++    LD ET+  Y   V A D        T  ATVNI+++++ND  P ++   
Sbjct: 723 ARSGEVTTTSLLDRETKSEYILIVRAVDGGVGHNQKTGIATVNITLLDINDNHPTWKDAP 782

Query: 147 YELFLPHIPLADLT-PGSVIGKVEAADGDKGDRVTL--SLRGPYEKMFSIND-SGHI--- 199
           Y     +I L ++T P S +  V A D D G+  TL  S++ P  K +S+N  +G I   
Sbjct: 783 Y-----YINLVEMTPPDSDVTTVVAVDPDLGENGTLVYSIQPP-NKFYSLNSTTGKIRTT 836

Query: 200 -SIVDLSALNTSTIQL----VVVATDTGNPPRQASVPA 232
            +++D    +    +L    +V  TD G PP +A+  A
Sbjct: 837 HAMLDRENPDPHEAELMRKIIVSVTDCGRPPLRATSSA 874



 Score = 46.2 bits (108), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 61/204 (29%), Positives = 90/204 (44%), Gaps = 25/204 (12%)

Query: 43   LQFSKNEYSVSALENLPVNYVLLTVTTNKPRDL-----RVKYWLSNDYGERFSISR-QGD 96
            +QFS   Y  + LENL +   ++ V      +L     R     S      F I    G 
Sbjct: 1311 VQFSNASYEATILENLALGTEIVRVQAYSIDNLNQITYRFDAHTSAQAKALFKIDAITGV 1370

Query: 97   ISLMQCLDYETEDSYRFTVYATDTLMTTSATVN--ISVVNVNDWDPRFRYPQYELFLPHI 154
            I++   +D E  D Y  TV A D      +TV   I+V++ ND  PRF +         I
Sbjct: 1371 ITVQGLVDREKGDFYTLTVVADDGGPKVDSTVKVYITVLDENDNSPRFDFTSDSAV--SI 1428

Query: 155  PLADLTPGSVIGKVEAADGDKGD--RVTLSLR-----GPYEKMFSINDS-GHISI---VD 203
            P  D   G  +  V+A D D G   +V  SL      G +E + + NDS G + +   +D
Sbjct: 1429 P-EDCPVGQRVATVKARDPDAGSNGQVVFSLASGNVAGAFE-IVTTNDSIGEVFVARPLD 1486

Query: 204  LSALNTSTIQLVVVATDTGNPPRQ 227
               L+   ++  VVA+D G+PPR+
Sbjct: 1487 REELDHYILK--VVASDRGSPPRK 1508



 Score = 44.7 bits (104), Expect = 0.079,   Method: Compositional matrix adjust.
 Identities = 40/137 (29%), Positives = 64/137 (46%), Gaps = 29/137 (21%)

Query: 65   LTVTTNKPRDLRVKYWLS---NDYG---------------ERFSIS-RQGDISLMQCLDY 105
            ++V+ + PR+ RV  WL+   ND G                +FS+  R   +  +  LD 
Sbjct: 1002 VSVSEDVPREFRV-VWLNCTDNDVGLNAELSYFITGGNLDGKFSVGYRDAVVRTVVSLDR 1060

Query: 106  ETEDSYRFTVYATDT-----LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLT 160
            ET  +Y   + A D        T +ATV ++V++VND  P F    YE  +P     D+ 
Sbjct: 1061 ETTATYMLILEAIDNGPVGKRHTGTATVFVTVLDVNDNRPIFLQSSYEASVPE----DIP 1116

Query: 161  PGSVIGKVEAADGDKGD 177
             G  I +++A D D+G+
Sbjct: 1117 EGHSIAQLKATDADEGE 1133



 Score = 43.1 bits (100), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 42/148 (28%), Positives = 69/148 (46%), Gaps = 19/148 (12%)

Query: 44  QFSKNEYSVSALENLPVNYVL--LTVTTNKPRDLRV----KYWLSNDYGERF-----SIS 92
           +F+ +EYSV+  E   V + L       +K  +L +    + +L  +    F     S+ 
Sbjct: 347 EFNSSEYSVAITELAQVGFALPLFIQVVDKDENLGLNSMFEVYLVGNNSHHFIISPTSVQ 406

Query: 93  RQGDISLMQC--LDYETEDSYRFTVYATDTL--MTTSATVNISVVNVNDWDPRFRYPQYE 148
            + DI +     LDYET D Y F ++A +++      A V I+++N ND  P F  P Y 
Sbjct: 407 GKADIRIRVAIPLDYETVDRYDFDLFANESVPDHVGYAKVKIALINENDNRPIFSQPLYN 466

Query: 149 LFLPHIPLADLTPGSVIGKVEAADGDKG 176
           + L      ++T G+ +  V A D D G
Sbjct: 467 VSL----YENVTVGTSVLTVLATDNDVG 490



 Score = 41.2 bits (95), Expect = 0.95,   Method: Compositional matrix adjust.
 Identities = 33/107 (30%), Positives = 49/107 (45%), Gaps = 8/107 (7%)

Query: 92   SRQGDISLMQCLDYETEDSYRFTVYATDTLMTTSAT---VNISVVNVNDWDPRFRYPQYE 148
            S  G +   Q +DYE      FTV A+D      A    V + +V++ND +P F  P Y+
Sbjct: 2349 SSAGKVIANQTVDYEEVHWLNFTVRASDNGSPPRAAEIPVYLEIVDINDNNPIFDQPSYQ 2408

Query: 149  LFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSIN 194
              +      D+  G++I  V A D D G+   +    G  E  F+IN
Sbjct: 2409 EAV----FEDVPVGTIILTVTATDADSGNFALIEYSLGDGEGKFAIN 2451



 Score = 40.4 bits (93), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 59/207 (28%), Positives = 88/207 (42%), Gaps = 22/207 (10%)

Query: 27  ALATLIVSKAGTSLRELQFSKNEYSVSAL---ENLPVNYVLLTVTTNKPRDLR---VKYW 80
           A   +++S     +  L F  N +  + L   E+ PV     +VT    RD+    + + 
Sbjct: 12  AWLLVLISGCWGQVNRLPFFTNHFFDTYLLISEDTPVGS---SVTQLLARDMDNDPLVFG 68

Query: 81  LSNDYGERFSISR--QGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDW 138
           +S +   RF       G + L Q LD ET+  +      +D     +  VNI V +VND 
Sbjct: 69  VSGEEASRFFAVEPDTGVVWLRQPLDRETKSEFTVEFSVSDHQGVITRKVNIQVGDVNDN 128

Query: 139 DPRFRYPQYELFLPHIPLADLTP-GSVIGKVEAADGD--KGDRVTLSLRGPYEKMFSIND 195
            P F    Y + +P     + TP G+ I  V A D D   G  V  S + P  + F+I+ 
Sbjct: 129 APTFHNQPYSVRIP-----ENTPVGTPIFIVNATDPDLGAGGSVLYSFQ-PSSQFFAIDS 182

Query: 196 SGHISIV--DLSALNTSTIQLVVVATD 220
           +  I  V  +L    T   QL V ATD
Sbjct: 183 ARGIVTVIRELDYETTQAYQLTVNATD 209



 Score = 38.1 bits (87), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 66/286 (23%), Positives = 121/286 (42%), Gaps = 61/286 (21%)

Query: 4    EDDFL-QPITLVVRA----IQYDNQDRYALATLIVSK-----AGTSL-----RELQFSKN 48
            +D FL  P T ++R     I  + Q+ Y L  +   +     +GT++      ++  S+ 
Sbjct: 2113 QDRFLIHPATGIIRVGNATIDREEQEAYRLMVVATDRGTIPLSGTAIVTILIDDINDSRP 2172

Query: 49   EY-----SVSALENLPVNYVLLTVTTNKPRDL--RVKYWL----SNDYGERFSISRQ--- 94
            E+     +VS LE+     V+  VT    RDL  +++Y +    + D  +R   +++   
Sbjct: 2173 EFLNPIQTVSVLESAEPGTVIANVTAID-RDLNPKLEYHIIGIVAKDDTDRLVPNQEDAF 2231

Query: 95   ------GDISLMQCLDYETEDSYRFTVYATD--------TLMTTSATVNISVVNVNDWDP 140
                  G + +   L+ E   +Y  T+   D        ++   +A + ++V++VND  P
Sbjct: 2232 AVNINTGSVMVKSPLNRELVATYEVTLSVIDNASDLPERSVSVPNAKLTVNVLDVNDNTP 2291

Query: 141  RFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSGHIS 200
            +F+      +   I L   TPG+ +  V A D DKG    ++       +  +   G++ 
Sbjct: 2292 QFKPFGITYYTERI-LEGATPGTTLIAVAAVDPDKGLNGLITY-----TLLDLVPPGYVQ 2345

Query: 201  IVDLSALNTSTIQLV-----------VVATDTGNPPRQASVPAIMH 235
            + D SA      Q V           V A+D G+PPR A +P  + 
Sbjct: 2346 LEDSSAGKVIANQTVDYEEVHWLNFTVRASDNGSPPRAAEIPVYLE 2391


>gi|334330616|ref|XP_001369584.2| PREDICTED: protocadherin Fat 3 [Monodelphis domestica]
          Length = 4557

 Score = 65.1 bits (157), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 64/197 (32%), Positives = 93/197 (47%), Gaps = 17/197 (8%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPR---DLRVKYWLSNDYGERFSI-SRQGDISLM 100
            FS + Y+    EN     +L  V    P    + +V Y L++  G  FS+ S  G I L 
Sbjct: 3131 FSSDHYNTCIYENTATKALLTRVQATDPDLGINRKVVYSLADSAGGYFSVDSSSGIIILE 3190

Query: 101  QCLDYETEDSYRFTVYATD----TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
            Q LD E + SY  +V A+D      +++ ATV I+V+++ND  P F    Y + +P    
Sbjct: 3191 QPLDRELQSSYNISVKASDQSILKALSSLATVTITVLDINDNPPVFERRDYLVTVPE--- 3247

Query: 157  ADLTPGSVIGKVEAADGDKGD--RVTLSLRGPYEK-MFSIN-DSGHISIVD-LSALNTST 211
             D TPG+ +  V A   D G    +T  +R   E+  F IN  +G IS+++ L       
Sbjct: 3248 -DTTPGTEVLAVFATSKDIGTNAEITYLIRSGNERGKFKINLKTGGISVIEALDYEMCKD 3306

Query: 212  IQLVVVATDTGNPPRQA 228
              LVV A D G P   A
Sbjct: 3307 FYLVVEAKDGGTPALSA 3323



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 71/226 (31%), Positives = 102/226 (45%), Gaps = 25/226 (11%)

Query: 23   QDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDL----RVK 78
            Q ++++ TL V     +     F    YSV  LE+LPV  V+  + T+ P DL    +V+
Sbjct: 914  QQQFSVVTLKVFLDDVNDCSPTFIPTSYSVKVLEDLPVGTVIAWLETHDP-DLGLGGQVR 972

Query: 79   YWLSNDYGERFSISR-QGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVND 137
            Y L NDY  RF I +  G I L + LDYE +  Y  TV A D          +S+ +V+ 
Sbjct: 973  YSLVNDYNGRFEIDKASGAIRLSKELDYEKQQFYNLTVRAKDKGRP------VSLSSVSF 1026

Query: 138  WDPRFRYPQYELFLPHIP----LADLTPGSVIG----KVEAADGDKG--DRVTLSLR-GP 186
             +         L  P+ P    +  +   S IG    +V A D D G    +  S+R G 
Sbjct: 1027 VEVEVVDVNENLHTPYFPDFAVVGSVKENSRIGTSVLQVTARDEDSGRDGEIQYSIRDGS 1086

Query: 187  YEKMFSIND-SGHISIVD-LSALNTSTIQLVVVATDTGNPPRQASV 230
                F+I+D SG I   D L    T +  L V ATD G  P  +++
Sbjct: 1087 GLGRFNIDDESGVIYTADILDRETTGSYWLTVYATDRGVVPLYSTI 1132



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 58/195 (29%), Positives = 90/195 (46%), Gaps = 16/195 (8%)

Query: 43  LQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLS-NDYGERFSIS-RQGDISLM 100
           ++F K  Y+V+  E  P   V+  V  N P    V+Y +S  +  E F I+ R G I   
Sbjct: 374 IRFEKETYNVTISEFSPPGVVVAIVKLN-PEPPGVEYRISPGEDAEYFKINPRSGLIVTA 432

Query: 101 QCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFL-PHIPLADL 159
           Q LD   ++ Y   V   +  +   A V I + + ND  P F+   YE F+   +P+   
Sbjct: 433 QPLDVIKKEVYELAVSNKEGDL--KAQVTIGLEDANDHTPEFQQSSYEAFVNESVPM--- 487

Query: 160 TPGSVIGKVEAADGDKGDR--VTLSLRGPYEKMFSIND-SGHISIVDLSALNTS--TIQL 214
             G+ +  V A+D DKG+   +T S+       FSIN  +G I   +     +S    + 
Sbjct: 488 --GTSVLSVSASDKDKGENGYITYSIASLNALPFSINQFTGVIRTTEELDFESSPENYRF 545

Query: 215 VVVATDTGNPPRQAS 229
           +V A+D G+P R  S
Sbjct: 546 IVRASDWGSPYRHES 560



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 53/199 (26%), Positives = 89/199 (44%), Gaps = 11/199 (5%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGERFSIS-RQGDISLMQC 102
            +F++ EY     EN+ +   ++ ++      L  +    N  G  F+I+   G I+  + 
Sbjct: 1670 KFTQKEYQAEVNENVDIGTSVILISAISQSTLIYEVKDGNIEG-IFTINPYSGVITNQKA 1728

Query: 103  LDYETEDSYRFTVYATDTL-MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIP-----L 156
            LDYE   SY+  + AT+   M ++ATVNI +V+ ND  P F + QY   L  +      +
Sbjct: 1729 LDYERISSYQLIIQATNMAGMASNATVNIQIVDENDNPPIFLFSQYSGSLSEVAPINSIV 1788

Query: 157  ADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSGHISIVDLSALNTSTI---Q 213
              L    ++ +   AD ++   +   +     K F   DS   +I  ++ L+  TI    
Sbjct: 1789 RSLGNNPLVIRATDADSNQNALLVYQIVESTAKKFFTVDSSTGAIRTIANLDHETIAHFH 1848

Query: 214  LVVVATDTGNPPRQASVPA 232
              V   D+GNP   A  PA
Sbjct: 1849 FHVHVRDSGNPQLTAESPA 1867



 Score = 48.5 bits (114), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 56/202 (27%), Positives = 93/202 (46%), Gaps = 25/202 (12%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWL-SNDYGERFSIS-RQGDISLMQC 102
            F K  Y+ S  E++ ++  +L++    P    + Y +   D   +F+I    G ++++  
Sbjct: 2186 FDKPFYTTSVNEDIEMHTPILSINATSPEGQGIIYIIVDGDPYNQFNIDFDTGVLNVISP 2245

Query: 103  LDYETEDSYRFTVYATDTLMTTSA--TVNISVVNVNDWDPRFRYPQYELFLPHIPLADLT 160
            LDYE    ++ TV A+D L    A  TV++ V +VND  P F  P Y         A L+
Sbjct: 2246 LDYEVTPVFKLTVRASDALTGARAEVTVDLLVNDVNDNPPIFDQPTYN--------ATLS 2297

Query: 161  PGSVIG----KVEAADGDKGDRVTLSLRGPYEKMFSINDSGHIS-----IVDLSALNTST 211
              S+IG    +V A+D D  +   +  +   +  ++  D  HI      I+    L+  +
Sbjct: 2298 EASLIGTPVLQVVASDADSENNKIVQYQ-IVQDTYNSTDYFHIDSTSGLILTARMLDHES 2356

Query: 212  IQ---LVVVATDTGNPPRQASV 230
            +Q   L V ATD G PP  + V
Sbjct: 2357 VQQSTLKVRATDNGFPPMSSEV 2378



 Score = 46.6 bits (109), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 44/157 (28%), Positives = 69/157 (43%), Gaps = 15/157 (9%)

Query: 88   RFS---ISRQGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRY 144
            RF+   +  +  + + + LD E +D Y   + ATD L  T A V ++V +VND  P    
Sbjct: 2972 RFALGLVQNEWKVYVKRPLDREEQDIYFLNITATDGLFVTQAMVEVTVTDVNDNSPVCDQ 3031

Query: 145  PQYELFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIN-DSGHISI 201
              Y    P     D+    +I K+ A D D G    +  SL G     F ++ +SG +  
Sbjct: 3032 VAYTALFPE----DIPSNKIILKISAKDADIGPNGDIRYSLYGSGNNKFFLDPESGELKT 3087

Query: 202  VDLSALNTSTI---QLVVVATDTGNPPRQASVPAIMH 235
              L+ L+   I    L+  ATD G    Q+ +  I+ 
Sbjct: 3088 --LALLDREKIPVYNLIARATDGGGRFCQSDIRLILE 3122



 Score = 45.8 bits (107), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 63/214 (29%), Positives = 94/214 (43%), Gaps = 28/214 (13%)

Query: 53   SALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYG-ERFSISRQ-GDISLMQCLDYET 107
            S  EN  +   +L VT    +  RD  ++Y + +  G  RF+I  + G I     LD ET
Sbjct: 1051 SVKENSRIGTSVLQVTARDEDSGRDGEIQYSIRDGSGLGRFNIDDESGVIYTADILDRET 1110

Query: 108  EDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSV 164
              SY  TVYATD     + ++  V I + +VND  P    P Y   +      D+   SV
Sbjct: 1111 TGSYWLTVYATDRGVVPLYSTIEVYIEIEDVNDNAPLTSEPIYYPVVMENSPKDI---SV 1167

Query: 165  IGKVEAADGDKGDRVTLSLR---GPYEKMFSIN-DSGHISIVD--LSALNTSTIQLVVVA 218
            I +++A D D      L+ R   G  +  F IN  +G I+     L     +   L V  
Sbjct: 1168 I-QIQAEDPDSSSNEKLTYRITSGNPQNFFVINIKTGLITTTSRKLDREQQAEHFLEVTV 1226

Query: 219  TDTGNPPRQASVPAIM----------HFPEAIVQ 242
            TD G+ P+Q++V  ++           FPE + Q
Sbjct: 1227 TDGGSSPKQSTVWVVVQVLDENDNKPQFPEKVYQ 1260



 Score = 44.3 bits (103), Expect = 0.091,   Method: Compositional matrix adjust.
 Identities = 67/231 (29%), Positives = 106/231 (45%), Gaps = 27/231 (11%)

Query: 27   ALATLIVSKAGTSLRELQFSKNEYSVSALEN-LPVNYVLLTVTTNKPRDLRVKYWLSNDY 85
            A+ T++V +A  S   L F+++ Y  S  EN   +  V +        +  +KY + N  
Sbjct: 1966 AMVTIMVKEAMDS--GLHFTQSFYFASISENSTNITKVAIVNAIGNRLNEPLKYSILNP- 2022

Query: 86   GERFSI-SRQGDISLMQC-LDYETEDSYRFTVYAT---DTLMTTSATVNISVVNVNDWDP 140
            G +F I S  G I       D E ++ Y   V A+   D L      V +++ ++ND  P
Sbjct: 2023 GNKFKIKSTSGVIQTTGIPFDREEQELYELVVEASRELDHLRVARVVVRVNIEDINDNSP 2082

Query: 141  RFRYPQYELFLPHIPLA--DLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIN-D 195
             F      + LP+      D  PG++I +V A D DKG    VT +L+  Y   F IN +
Sbjct: 2083 VF------VGLPYYAAVQVDAEPGTLIYRVTALDRDKGANGEVTYTLQEDY-GHFEINPE 2135

Query: 196  SGHISIVDLSALNTSTIQ--LVVVATDTGNPPRQASVPAIMHFPEAIVQQA 244
            SG + + +    + S I+  ++++A D G P   ASV      P  IV +A
Sbjct: 2136 SGSVFLKEAFNSDLSNIEYGVIILAKDGGKPALSASV----ELPITIVNKA 2182



 Score = 42.7 bits (99), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 39/146 (26%), Positives = 73/146 (50%), Gaps = 17/146 (11%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYG-----ERFSI-SRQG 95
            F  + Y    +E +PV   L+ V     +   + +V Y L +D       E FSI +  G
Sbjct: 2814 FDASSYEAIIMEGMPVGTRLIQVKAIDKDWGANGQVTYALHSDSNAEKVMEVFSIDTNTG 2873

Query: 96   DISLMQCLDYETEDSYRFTVYATDT----LMTTSATVNISVVNVNDWDPRFRYPQYELFL 151
             IS ++ LD+E + ++ F+V A+D      ++++  V+++V ++ND  P F    +E++ 
Sbjct: 2874 WISTLKDLDHERDPTFTFSVLASDLGEAFSLSSTTLVSVTVTDINDNAPVF---GHEVYR 2930

Query: 152  PHIPLADLTPGSVIGKVEAADGDKGD 177
             ++  +D  PG V+  +   D D  D
Sbjct: 2931 EYVKESD-PPGEVVAVLSTWDEDTSD 2955



 Score = 42.4 bits (98), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 51/198 (25%), Positives = 91/198 (45%), Gaps = 15/198 (7%)

Query: 45   FSKNEYSVSALENL-PVNYVLLTVTTNKP--RDLRVKYWL--SNDYGERFSIS-RQGDIS 98
            F + +Y V+  E+  P   VL    T+K    +  + Y +   N+ G +F I+ + G IS
Sbjct: 3236 FERRDYLVTVPEDTTPGTEVLAVFATSKDIGTNAEITYLIRSGNERG-KFKINLKTGGIS 3294

Query: 99   LMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIP 155
            +++ LDYE    +   V A D     ++  ATVNI++ +VND  P+F    Y   +    
Sbjct: 3295 VIEALDYEMCKDFYLVVEAKDGGTPALSAVATVNINLTDVNDNAPKFNQEVYSAVISED- 3353

Query: 156  LADLTPGSVIGKVEAADGDKGDRVTLSL-RGPYEKMFSINDS-GHISI-VDLSALNTSTI 212
             A +    ++   E  D     ++  S+  G  +  F+++   G + +   L     S  
Sbjct: 3354 -ASIGDSVIVLIAEDVDSPPNGQIRFSIVSGDRDNEFAVDPVLGLVKVKKKLDRERVSGY 3412

Query: 213  QLVVVATDTGNPPRQASV 230
             L++ ATD+G P   ++V
Sbjct: 3413 SLLIQATDSGVPAMSSTV 3430



 Score = 40.8 bits (94), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 27/90 (30%), Positives = 43/90 (47%), Gaps = 4/90 (4%)

Query: 95   GDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHI 154
            G I + + LD E    Y  +V  TD        V I V++ ND  P F  P YE+ +   
Sbjct: 1413 GTIVIAKPLDAEQRSIYNMSVEVTDGTNVAVTQVFIKVLDNNDNGPEFSQPSYEVTISE- 1471

Query: 155  PLADLTPGSVIGKVEAADGDKGDRVTLSLR 184
               D+ P + I +VEA D D+  +++ ++ 
Sbjct: 1472 ---DVLPDTEILQVEATDRDEKHKLSYTIH 1498



 Score = 39.3 bits (90), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 50/201 (24%), Positives = 82/201 (40%), Gaps = 18/201 (8%)

Query: 44   QFSKNEYSVSALEN-LPVNYVLLTVTTNKPRDLRVKYWLSNDYG----ERFSI-SRQGDI 97
            +FS+  Y V+  E+ LP   +L    T++    ++ Y + +        +F I +  G +
Sbjct: 1459 EFSQPSYEVTISEDVLPDTEILQVEATDRDEKHKLSYTIHSSIDSVSMRKFRIDASTGVL 1518

Query: 98   SLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHI 154
             + + LD+E +D +   +   D         A V ++V + ND  P F  P YE  +   
Sbjct: 1519 YIAERLDHEAQDKHILNIMVRDQEFPYRRNLARVIVNVEDANDHSPYFTSPLYEASV--- 1575

Query: 155  PLADLTPGSVIGKVEAADGDKGDRVTLSL---RGPYEKMFSINDSGHISIVDLSALNTST 211
                   GS + +V A D D+G+   L      G     F I     I  V      T+ 
Sbjct: 1576 -FESAALGSAVLQVTALDKDRGENAELLYTIEAGNTGNTFKIEPILGIITVSKEPDMTTM 1634

Query: 212  IQLV--VVATDTGNPPRQASV 230
             Q V  +  TD G+PP  A+ 
Sbjct: 1635 GQFVLSIKVTDQGSPPMSATA 1655



 Score = 37.7 bits (86), Expect = 9.4,   Method: Compositional matrix adjust.
 Identities = 30/96 (31%), Positives = 48/96 (50%), Gaps = 7/96 (7%)

Query: 148  ELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSGHISIVDLSAL 207
            E+F+  + + D  PG VIGK+ A D D  D +T SL+     +F +N +    I+ L  L
Sbjct: 3555 EIFI--VTMEDDFPGGVIGKIHATDQDVYDVLTYSLKSEQRSLFKVN-THDGKIIALGGL 3611

Query: 208  NTSTIQLVVVATDTGNPPRQASVPAIMHFPEAIVQQ 243
            ++    L V  +D      Q  +  I+H  E +VQ+
Sbjct: 3612 DSGKYILNVSVSDGR---FQVPIDVIVHV-EQLVQE 3643


>gi|281345413|gb|EFB20997.1| hypothetical protein PANDA_000354 [Ailuropoda melanoleuca]
          Length = 2272

 Score = 65.1 bits (157), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 62/205 (30%), Positives = 95/205 (46%), Gaps = 23/205 (11%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKY---WLSNDYGERFSI-SRQGDI 97
            F++ EY V  LEN+PV Y LL V    P +     V Y    + +   + F + S  GDI
Sbjct: 1801 FTQPEYRVKVLENVPVGYRLLAVKATDPDEGANGEVTYSFRKVRDKMSQLFQLNSLTGDI 1860

Query: 98   SLMQCLDYETEDSYRFTVYATD--TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIP 155
            +++  LDYE    Y   V A D   L      +++ V ++ND  P F +  Y  ++P   
Sbjct: 1861 TILGDLDYEDSGFYDIDVEAHDGPGLRARKTHISLQVADINDNPPAFPHASYSAYIPE-- 1918

Query: 156  LADLTPGSVIGKVEAADGD--KGDRVTLSLRG------PYEKMFSIN-DSGHI-SIVDLS 205
              +   G+ I  + A D D  +  RVT SL        P     SIN D+G + ++    
Sbjct: 1919 --NNPRGASILSISAQDPDSIENARVTYSLAEDTFHGMPLSSYVSINSDTGVLYALCSFD 1976

Query: 206  ALNTSTIQLVVVATDTGNPPRQASV 230
                  +QL+V A+D+G PP  ++V
Sbjct: 1977 FEQVRDLQLLVTASDSGVPPLSSNV 2001



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 61/198 (30%), Positives = 90/198 (45%), Gaps = 17/198 (8%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWLSNDYG---ERFSI-SRQGDI 97
           F++ EY VS  ENLPV   LLTV    P +    +V Y L    G   + F + S  GDI
Sbjct: 242 FTQPEYQVSVPENLPVGTTLLTVNATDPDEGFNAQVSYILDKMPGKVAQMFDLNSVTGDI 301

Query: 98  SLMQCLDYETEDSYRFTVYATDTL-MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
           S+++ LDYE    Y   + A D   + ++A + + V++VND  P          +P    
Sbjct: 302 SILKSLDYEDATFYEIKIEAQDGPGLFSTAKILVMVLDVNDNAPEVTITSLTGSIPE--- 358

Query: 157 ADLTPGSVIGKVEAADGDKGD--RVTLSLRG--PYEKMFSINDSGH-ISIVDLSALNTST 211
            + T G  I  +   D D G   +VT+ + G  P+    SI+     ++   L     S 
Sbjct: 359 -EATAGREIALINVHDRDSGQNGQVTVFVLGNMPFNLEKSIDQYYRLVTARSLDREQVSE 417

Query: 212 IQLVVVATDTGNPPRQAS 229
             + + ATD GNPP   S
Sbjct: 418 YNITLRATDGGNPPLSTS 435



 Score = 46.2 bits (108), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 54/218 (24%), Positives = 92/218 (42%), Gaps = 23/218 (10%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKP---RDLRVKYWL-SNDYGER-----FSISRQG 95
            F +  Y V   EN P    +  V+   P    + RV Y + ++D   R      S+S Q 
Sbjct: 1174 FHQASYVVHVAENNPPGASIAQVSAFDPDLGHNGRVSYSIVASDLEPRALASYVSVSAQS 1233

Query: 96   DISLMQ-CLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQY---- 147
             +   Q   D+E   ++  T+ A D     ++ + ++ + V + ND  PR  YP      
Sbjct: 1234 GVVFAQRAFDHEQLRAFELTLQARDQGSPALSANVSLRVLVDDRNDNAPRVLYPALGPDG 1293

Query: 148  ELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-DSGHISIVD 203
                  +P A   PG ++ KV A D D G    LS   L+     +FS+   +G +    
Sbjct: 1294 SALFDTVPRA-AQPGYLVTKVVAVDADSGHNAWLSYHVLQASEPGLFSLGLRTGEVRTAR 1352

Query: 204  -LSALNTSTIQLVVVATDTGNPPRQASVPAIMHFPEAI 240
             L   + +  +L+V   D G PP  A+   ++ F +++
Sbjct: 1353 ALGDRDAARQRLLVAVRDGGQPPLSATATLLLVFADSL 1390



 Score = 45.1 bits (105), Expect = 0.062,   Method: Compositional matrix adjust.
 Identities = 69/274 (25%), Positives = 117/274 (42%), Gaps = 45/274 (16%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKP---RDLRVKYWLSND--YGERFS--ISRQGDI 97
            F    YS    EN P    +L+++   P    + RV Y L+ D  +G   S  +S   D 
Sbjct: 1907 FPHASYSAYIPENNPRGASILSISAQDPDSIENARVTYSLAEDTFHGMPLSSYVSINSDT 1966

Query: 98   SLMQCL---DYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFL 151
             ++  L   D+E     +  V A+D+    ++++ +++I +++ ND  P   YP     L
Sbjct: 1967 GVLYALCSFDFEQVRDLQLLVTASDSGVPPLSSNVSLSIFILDQNDNAPEILYPA----L 2022

Query: 152  P-----HIPLADLTP--GSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-DSGHI- 199
            P      + LA  +   G ++ KV A D D G    LS   L+     +F++   +G + 
Sbjct: 2023 PTDGSTGVELAPRSAELGYLVTKVVAVDRDSGQNAWLSYRLLKASEPGLFAVGLHTGEVR 2082

Query: 200  ---SIVDLSALNTSTIQLVVVATDTGNPPRQASVPAIM----HFPEAIVQQASSKLNSGT 252
               +++D  AL  S   LVV   D G PP  A+V   +      P+ +    S +     
Sbjct: 2083 TARALLDRDALKQS---LVVAVQDHGQPPLSATVTLTVAVADSIPDVLADLGSIRTPGDP 2139

Query: 253  SSTVLII------LGVVLIVLGFVIILLILYIHK 280
              + L +        V  + L FVI+LL L + +
Sbjct: 2140 DDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLRR 2173



 Score = 38.5 bits (88), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 30/116 (25%), Positives = 59/116 (50%), Gaps = 13/116 (11%)

Query: 96  DISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLP 152
           ++ L + LD E +  ++  + A+D    + + +  + + V++ ND  P F  P+Y++ +P
Sbjct: 193 ELVLERALDREQKKVHQLVLIASDGGNPVRSGNLCIQVIVLDANDNPPVFTQPEYQVSVP 252

Query: 153 HIPLADLTPGSVIGKVEAADGDKGDRVTLS-----LRGPYEKMFSIND-SGHISIV 202
                +L  G+ +  V A D D+G    +S     + G   +MF +N  +G ISI+
Sbjct: 253 E----NLPVGTTLLTVNATDPDEGFNAQVSYILDKMPGKVAQMFDLNSVTGDISIL 304


>gi|126330664|ref|XP_001369066.1| PREDICTED: protocadherin Fat 4 [Monodelphis domestica]
          Length = 4980

 Score = 65.1 bits (157), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 73/265 (27%), Positives = 117/265 (44%), Gaps = 44/265 (16%)

Query: 2    INEDD-----FLQPITLV---VRAIQYDNQDRYALATLIVSKAGTSLRELQ--------- 44
            ++EDD     FL P+T V    R++ Y+ Q  Y L T      G     ++         
Sbjct: 1878 VSEDDEDGIFFLNPVTGVFNLTRSLDYETQQYYIL-TAHAEDGGGQFMTIRVYFNILDVN 1936

Query: 45   -----FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWL-SNDYGERFSISRQG 95
                 FS   YS S +ENLP+   +L        D    ++ Y + S D   +F++ + G
Sbjct: 1937 DNPPVFSLTSYSTSLMENLPLGSTILIFNVTDADDGPNSQLSYSITSGDSLGQFTVDKNG 1996

Query: 96   DISLMQCLDYETEDSYRFTVYATDTLM------TTSATVNISVVNVNDWDPRFRYPQYEL 149
             + + Q LD E++  Y   +   D  +      T++A V+I +++VND  P F  P+   
Sbjct: 1997 VLKVRQTLDRESQSFYNLVIQVHDMPLPSASSYTSTAQVSIILLDVNDNAPTFISPK--- 2053

Query: 150  FLPHIPLADLTP-GSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIND-SGHISIV-DL 204
             L ++P  + TP  +V+ K +A D D G    +  +L  P    FSI    G + +  +L
Sbjct: 2054 -LTYVP--ENTPTDTVVFKAQATDRDSGPNSYIEYTLLNPLGNKFSIGTIDGEVRLTGEL 2110

Query: 205  SALNTSTIQLVVVATDTGNPPRQAS 229
                 S   L +VATD G P   +S
Sbjct: 2111 DREEVSNYTLTIVATDKGQPALSSS 2135



 Score = 58.2 bits (139), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 68/229 (29%), Positives = 108/229 (47%), Gaps = 25/229 (10%)

Query: 13   LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKP 72
            L VRA       +    T+I++    +    +FS+  ++    EN P+ Y +  VTT+  
Sbjct: 2741 LTVRASDKGTPSQSTTVTVIINVLDENDNAPRFSQ-IFTAPVPENAPLGYTVTRVTTSD- 2798

Query: 73   RDLRV----KYWLSNDYGERFSIS-RQGDISLMQCLDYETEDSYRFTVYATDTLMTTSAT 127
             D+ V    +Y +  D    FSI+   GDI + + L+ E  D YR  V A D+  T S  
Sbjct: 2799 EDVGVNAISRYSII-DTSLPFSINPSTGDIIISRPLNREDTDRYRIRVSAHDSGWTVSTD 2857

Query: 128  VNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGD--RVTLSLRG 185
            V I V +VND  PRF+ P Y L  P   L ++  G+ + +V A D D+G   +V   ++ 
Sbjct: 2858 VAIFVTDVNDNAPRFKKPSYYLDCPE--LTEI--GAKVAQVSATDPDEGSNGQVFYFIKS 2913

Query: 186  PYEKMFSIN-DSGHI---------SIVDLSALNTSTIQLVVVATDTGNP 224
              E  F IN  +G I         ++   S +N +    +V ++D G+P
Sbjct: 2914 QSE-FFRINATTGEIYNKQALKYRNVTGSSNVNINRHSFIVTSSDRGSP 2961



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 57/190 (30%), Positives = 94/190 (49%), Gaps = 15/190 (7%)

Query: 56   ENLPVNYVLLTVTTNKPRDLRVKYWL-SNDYGERFSISR-QGDISLMQCLDYETEDSYRF 113
            E+ P+  ++ T++ +  R   + Y++ S + G  F I +  G +S+ Q LD+E    Y  
Sbjct: 2578 ESQPIGTLITTISGSSSRGEPLSYFIASGNLGGAFHIDQLTGQVSISQHLDFEMVQKYVV 2637

Query: 114  TVYATDTLM---TTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEA 170
             + A DT     ++   + I+V++VND  P F+    + F+  I L +L+P +++  V A
Sbjct: 2638 WIEARDTGFPPFSSYEKLAIAVMDVNDNSPIFKE---DPFVAEI-LENLSPRTLL-TVSA 2692

Query: 171  ADGDKGDRVTLS---LRGPYEKMFSINDS-GHI-SIVDLSALNTSTIQLVVVATDTGNPP 225
             D D G    L    + G  E  FSI+ S G I SI  L     S   L V A+D G P 
Sbjct: 2693 MDKDSGPNGQLEYSIVNGNIENSFSIHHSTGEIKSIRSLDREKVSQYVLTVRASDKGTPS 2752

Query: 226  RQASVPAIMH 235
            +  +V  I++
Sbjct: 2753 QSTTVTVIIN 2762



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/101 (31%), Positives = 49/101 (48%), Gaps = 5/101 (4%)

Query: 77   VKYWLSNDYGERFSIS-RQGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNV 135
            V Y + +   + F I    G++   + LD E    Y   V A D L ++   +NI++ +V
Sbjct: 1773 VTYAIISGADDSFHIDPESGELIATKRLDRERRSKYSLLVRADDGLQSSDMRINITISDV 1832

Query: 136  NDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG 176
            ND  P+F  P Y   +P     D TPGS++  + A D D G
Sbjct: 1833 NDHIPKFSRPVYSFDIPE----DTTPGSLVAAILATDDDSG 1869



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 57/191 (29%), Positives = 85/191 (44%), Gaps = 16/191 (8%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGERFSIS-RQGDISLM 100
            F   EYS + LEN P    ++ +     +   +  + Y L +   + F I    G I+  
Sbjct: 3194 FVPEEYSPTVLENAPSGTTVMRLNATDADSGSNAVIAYSLQSSDSDLFVIDPNSGIITTQ 3253

Query: 101  QCLDYETEDSYRFTVYA---TDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLA 157
              LDYET+ SY  TV A    D    + ATVNI +   N++ PRF    Y   +      
Sbjct: 3254 GFLDYETKQSYHLTVKAFNVPDEERCSFATVNIHLKGTNEYVPRFVSKLYYFEISEA--- 3310

Query: 158  DLTPGSVIGKVEAAD---GDKGDRVTLSLRGPYEKMFSIND-SGHISIVD-LSALNTSTI 212
              + GSV+G+V A+D   G  G+   L      +K F IN  +G I +   L       I
Sbjct: 3311 -ASKGSVVGEVFASDRDMGTDGEVHYLIFGTSRKKGFQINSRTGQIYVSGVLDREKEERI 3369

Query: 213  QLVVVATDTGN 223
             L V+A ++G+
Sbjct: 3370 SLKVLAKNSGS 3380



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 49/160 (30%), Positives = 80/160 (50%), Gaps = 15/160 (9%)

Query: 77   VKYWLSNDYGERFSISR-QGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISV 132
            ++Y L N  G +FSI    G++ L   LD E   +Y  T+ ATD     +++S  V + +
Sbjct: 2083 IEYTLLNPLGNKFSIGTIDGEVRLTGELDREEVSNYTLTIVATDKGQPALSSSTEVAVII 2142

Query: 133  VNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGD----RVTLSLRGPYE 188
            +++ND +P F    Y++ +    L     G+ I +V AADGD+G     R +L LRG   
Sbjct: 2143 LDINDNNPIFAQALYKVEIDENTLT----GTDIVQVYAADGDEGTNGQVRYSL-LRGNEN 2197

Query: 189  KMFSIND-SGHISIVD-LSALNTSTIQLVVVATDTGNPPR 226
              F ++  +G +S+   L     +   L V + D G+ PR
Sbjct: 2198 HEFRMDSVTGILSVAKPLDREKKAAYSLTVQSVDRGSSPR 2237



 Score = 52.0 bits (123), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 46/156 (29%), Positives = 79/156 (50%), Gaps = 13/156 (8%)

Query: 89   FSI-SRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRY 144
            F+I S  G +SL   LD+E   SY   + A D+    + ++ T++I +++ ND  P F  
Sbjct: 1256 FAIDSATGQVSLAGQLDHEATSSYSLLIQAVDSGAVSLNSTCTLSIDILDENDNTPSF-- 1313

Query: 145  PQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTL--SLRGPY-EKMFSIN-DSGHIS 200
            P+  LF+    L ++  G ++  V A D D GD   +  S+ G      FSI+ ++G I 
Sbjct: 1314 PKSTLFVD--VLENMRIGELVTSVTATDSDSGDNADIHYSITGTNNHGTFSISPNTGGIF 1371

Query: 201  IVDLSALNTSTI-QLVVVATDTGNPPRQASVPAIMH 235
            +       T  + +L + A D G PPR +++  ++H
Sbjct: 1372 LAKKLDFETQPLYKLNITAKDQGRPPRSSTMSVVIH 1407



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 51/178 (28%), Positives = 78/178 (43%), Gaps = 36/178 (20%)

Query: 89   FSISRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYP 145
            F +S  G++ ++Q LD ET++     + ATD+    +T + TVN+ V +VND  P F + 
Sbjct: 2306 FILSASGELKVIQSLDRETKEKCILLITATDSGSPALTGTGTVNVIVDDVNDNIPTFAHK 2365

Query: 146  QYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR---GPYEKMFSINDSGHISIV 202
             Y   +      D   GS +  V A+D D      +S R   G     F+IN S    I+
Sbjct: 2366 MYSATISE----DAPTGSDVLLVNASDADASTNAVISYRLIGG--NSQFTINPSTG-QII 2418

Query: 203  DLSALNTSTIQ---LVVVATDTG--------------------NPPRQASVPAIMHFP 237
              + L+  T +   L+VV++D G                    NPPR    P + H P
Sbjct: 2419 TSALLDRETKENYTLIVVSSDGGFPEPLSSSTSVSVTVTDVNDNPPRFQHHPYVTHIP 2476



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 50/187 (26%), Positives = 97/187 (51%), Gaps = 12/187 (6%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRDLR--VKYWLS-NDYGERFSISR-QGDISLM 100
           FS+  YS    EN+ + Y + +V+ +   DL   + Y ++  D    F+I++  G ++  
Sbjct: 791 FSQATYSFVVFENVALGYHVGSVSAST-MDLNTNITYVITTGDQKGVFTINQFTGHLTTS 849

Query: 101 QCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLT 160
             +D E +  Y+  V A+  L+T    VNI+V ++ND  P F      + +    + +  
Sbjct: 850 SIIDREEQSFYQLKVVASGGLVTGETLVNITVKDLNDNAPHFLQAVEWVNV----VENWQ 905

Query: 161 PGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIND-SGHISIVDLSALNTSTIQLVVV 217
            G  I + +A D D+G    V  SL+   + +F+I++ +G+IS++    ++T + Q+ ++
Sbjct: 906 AGHSIFQAKALDPDEGVNGMVLYSLKQNPKNLFTIDEKNGNISLLRPLDVHTGSYQVEIL 965

Query: 218 ATDTGNP 224
           A+D G P
Sbjct: 966 ASDRGVP 972



 Score = 45.8 bits (107), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 55/198 (27%), Positives = 84/198 (42%), Gaps = 24/198 (12%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWL-SNDYGERFSISRQGDISLM 100
            F +  Y V+  E  PVN +   V     +   +  + Y +   + G  F I   G + + 
Sbjct: 994  FDQLSYEVTLSEAQPVNSLFFKVQASDQDSGANGEIAYSIVEGNTGNAFGIFPDGQLYVK 1053

Query: 101  QCLDYETEDSYRFTVYATDTLMTT-SATVNISVV--NVNDWDPRFRYPQYELFLPHIPLA 157
              LD E +D Y   V A+D  +   SATVN++VV  +VND  P F    Y  +       
Sbjct: 1054 SELDRELQDRYVLVVVASDRAVEPLSATVNVTVVLEDVNDNRPLFNSTNYVFYFEE---- 1109

Query: 158  DLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKM---FSIND-SGHISIV---DLSAL--- 207
            +   GS +G + A D D G      +R  +E M   F +N  +G I+     D  +L   
Sbjct: 1110 EQEGGSFVGMINAIDKDFGPNG--EVRYSFENMQPDFELNAITGEITSTHQFDRESLMRQ 1167

Query: 208  -NTSTIQLVVVATDTGNP 224
               +     V+A+D G P
Sbjct: 1168 RGAAVFSFTVIASDQGLP 1185



 Score = 42.0 bits (97), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 39/137 (28%), Positives = 66/137 (48%), Gaps = 12/137 (8%)

Query: 89   FSISRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVND--WDPRFR 143
            FS+S  G +S  + +D E    +  +V   D+    M+++ TV+I V++ ND   +PR  
Sbjct: 3558 FSLSTAGVLSTTREIDREQIGDFYLSVITRDSGIPQMSSTGTVHIRVIDQNDNPSEPR-- 3615

Query: 144  YPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSGHISIVD 203
                E+F+ +   ++L PG ++G V+  D D  D    SL      +FSI  SG   +  
Sbjct: 3616 --TVEIFVHY--FSNLFPGGILGSVKPQDPDVLDSFHCSLTSGVTSLFSI-PSGTCDLNS 3670

Query: 204  LSALNTSTIQLVVVATD 220
             +     T  L V++ D
Sbjct: 3671 QARSADGTFDLTVLSND 3687



 Score = 41.6 bits (96), Expect = 0.60,   Method: Compositional matrix adjust.
 Identities = 47/169 (27%), Positives = 82/169 (48%), Gaps = 17/169 (10%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWL-----SNDYGERFSI-SRQGDI 97
            +FS++  S +  E+  V  V+ TV+  + RD  +   L     S +    F+I +  G +
Sbjct: 3088 EFSQSHMSTTVPESQSVGSVVRTVSA-RDRDAAMNGLLTYHISSGNEDGLFAINASTGAL 3146

Query: 98   SLMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHI 154
             L + LDYE    +  T+ ATD      T+  ++ I+V++VND  P F   +Y    P +
Sbjct: 3147 ILAKPLDYELHQKHEMTISATDGGWVARTSYCSIIINVLDVNDNSPVFVPEEYS---PTV 3203

Query: 155  PLADLTPGSVIGKVEAADGDKGDR--VTLSLRGPYEKMFSIN-DSGHIS 200
             L +   G+ + ++ A D D G    +  SL+     +F I+ +SG I+
Sbjct: 3204 -LENAPSGTTVMRLNATDADSGSNAVIAYSLQSSDSDLFVIDPNSGIIT 3251



 Score = 41.6 bits (96), Expect = 0.69,   Method: Compositional matrix adjust.
 Identities = 66/224 (29%), Positives = 96/224 (42%), Gaps = 24/224 (10%)

Query: 25  RYALATLIVSKAGTSLRELQFSKNE-YSVSALENLPVNYVLLTVTTNKPRDL------RV 77
           + + A L+V+    +  +  FS+   Y VS  EN P    LL +  +   DL      R 
Sbjct: 560 KVSYAQLVVTVLDVNDEKPVFSQEAGYEVSVAENAPAGTDLLVIEASD-GDLGDNGTVRF 618

Query: 78  KYWLSNDYGERFSISR-QGDISLMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVV 133
            +  S      F +    G +S +  LD E +  Y   V A D      ++   VN+S++
Sbjct: 619 SFQESETEQRAFRLDPVSGRLSTISSLDREEQAFYSLLVLAVDLGSPAQSSLTRVNVSLL 678

Query: 134 NVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTL--SLRGPYEKMF 191
           +VND  P F   QY     HI   +   GS I  V A+D D G   T+  S+       F
Sbjct: 679 DVNDNSPVFYPVQY---FAHI-QENEPAGSYITTVSASDPDSGPNGTVKYSISAGDTSGF 734

Query: 192 SINDSGHISIVDLSALN---TSTIQLVVVATDTGN--PPRQASV 230
            I+ S  ++I     L+    +  QL VVATD G+   P QA V
Sbjct: 735 QIH-SHTVAISTRMVLDREEKTAYQLQVVATDGGHLQSPNQAIV 777



 Score = 41.2 bits (95), Expect = 0.85,   Method: Compositional matrix adjust.
 Identities = 48/163 (29%), Positives = 78/163 (47%), Gaps = 15/163 (9%)

Query: 77   VKYWLSNDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISV 132
            V Y L  +    F+I  + G+ISL++ LD  T  SY+  + A+D     +++S  + +S+
Sbjct: 926  VLYSLKQNPKNLFTIDEKNGNISLLRPLDVHT-GSYQVEILASDRGVPQLSSSFILTVSI 984

Query: 133  VNVNDWDPRFRYPQYELFLPHIPLADLTP-GSVIGKVEAADGDKGDRVTLS---LRGPYE 188
             +VND  P F    YE     + L++  P  S+  KV+A+D D G    ++   + G   
Sbjct: 985  HDVNDNPPVFDQLSYE-----VTLSEAQPVNSLFFKVQASDQDSGANGEIAYSIVEGNTG 1039

Query: 189  KMFSINDSGHISI-VDLSALNTSTIQLVVVATDTGNPPRQASV 230
              F I   G + +  +L         LVVVA+D    P  A+V
Sbjct: 1040 NAFGIFPDGQLYVKSELDRELQDRYVLVVVASDRAVEPLSATV 1082



 Score = 40.8 bits (94), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 49/108 (45%), Gaps = 8/108 (7%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGERFSISRQGDISLMQ 101
           F  + Y     E+  V   +L VT    ++  +  ++Y L  D G        G I++ +
Sbjct: 250 FRSSHYQAGVPEDAVVGSSVLQVTAADADEGTNADIRYQLQEDGGPFHMDPETGLITVRE 309

Query: 102 CLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDP--RFRY 144
            LDYE    Y  T+ A D     +T  A   I +++VND DP  +FRY
Sbjct: 310 PLDYEARRQYSLTLQAHDRGVPSLTGRAEALIQLLDVNDNDPVVKFRY 357


>gi|426256282|ref|XP_004021770.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 1 [Ovis aries]
          Length = 4588

 Score = 65.1 bits (157), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 65/221 (29%), Positives = 105/221 (47%), Gaps = 20/221 (9%)

Query: 29   ATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDL----RVKYWLSND 84
            A + V+  G +L    F +NEY V   EN PV + L+T      RDL     V Y + ND
Sbjct: 2476 AQVHVTVIGGNLHSPMFLQNEYEVELAENAPV-HTLVTEVKAADRDLGIYGHVTYHIVND 2534

Query: 85   YG-ERFSISRQGDISLMQCLDYET--EDSYRFTVYATDTLMTTS-ATVNISVVNVNDWDP 140
            +  +RF  + +G I  ++ LD ET  E        A D     +  T+N+ + + ND  P
Sbjct: 2535 FAKDRFYTNERGQIFTLEKLDRETPAEKVIPIRFMAKDAGGKVAFCTINVILTDDNDNAP 2594

Query: 141  RFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDR--VTLSLRGPYEKM---FSIND 195
            +FR  ++E+ +     +++  G+ + KV A+D D+G    +T ++    E +     IN 
Sbjct: 2595 QFRATKFEVNIG----SNVPKGTSVIKVLASDADEGSNADITYAIEADSESVKENLEINR 2650

Query: 196  -SGHISIVD-LSALNTSTIQLVVVATDTGNPPRQASVPAIM 234
             SG I+  + L  L        V A D G+P R++ VP  +
Sbjct: 2651 ASGVITTKESLIGLENEVFTFFVRAVDNGSPQRESVVPVCV 2691



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/156 (26%), Positives = 79/156 (50%), Gaps = 11/156 (7%)

Query: 33   VSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYW---LSNDYGERF 89
            +SK   SL  + F ++ ++ + +E+ PV +++  ++   P    +  W   +  +Y   F
Sbjct: 1346 ISKPKPSLEPISFEESFFTFTVMESDPVAHMIGVISVEPPG---IPLWFDIIGGNYDSHF 1402

Query: 90   SISR-QGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYE 148
             + R  G I + + LD E + +Y  TV ATD   +    V I V++ ND  P+F   +YE
Sbjct: 1403 DVDRGTGTIIIAKPLDAEQKSNYNLTVEATDGTTSILTQVFIKVIDTNDHRPQFSTSKYE 1462

Query: 149  LFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR 184
            + +P     D  P + I ++ A D D+ +++  +L+
Sbjct: 1463 VVIPE----DTVPETEILQISAVDKDEKNKLIYTLQ 1494



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 55/199 (27%), Positives = 93/199 (46%), Gaps = 16/199 (8%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTT----NKPRDLRVKYWLSN-DYGERFSISR---QG 95
            +F+   Y  +  E+ P   V+  V+T    ++  + +V Y+++  D   +F+I     + 
Sbjct: 2917 RFTAEIYKGTVSEDDPPGGVIAIVSTTDADSEEINRQVTYYITGGDPLGQFAIENIQNEW 2976

Query: 96   DISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIP 155
             + + + LD E  D+Y  T+ ATD   ++ A V + V++ ND  P      Y   +P   
Sbjct: 2977 KVYVKKPLDREERDNYLLTITATDGTFSSKAIVEVKVLDANDNSPVCEKTLYSDTIPE-- 3034

Query: 156  LADLTPGSVIGKVEAADGD--KGDRVTLSLRGPYEKMFSIN-DSGHISI-VDLSALNTST 211
              D  PG +I +V A D D      +T +L GP  + F +N D+G +     L     +T
Sbjct: 3035 --DAFPGKLIMQVSATDADIRSNAEITYTLFGPGAEKFKLNPDTGELKTSAPLDREEQAT 3092

Query: 212  IQLVVVATDTGNPPRQASV 230
              L+V A D G    QAS+
Sbjct: 3093 YHLLVKAADGGGRFCQASI 3111



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 63/225 (28%), Positives = 109/225 (48%), Gaps = 19/225 (8%)

Query: 13   LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVT---T 69
            L+V+A   D   R+  A+++++    +    +FS + Y+++  EN     +L  V     
Sbjct: 3095 LLVKAA--DGGGRFCQASIVLTLEDVNDNAPEFSADPYTITVFENTEPGTLLTRVQATDA 3152

Query: 70   NKPRDLRVKYWLSNDYGERFSISR-QGDISLMQCLDYETEDSYRFTVYATD----TLMTT 124
            +   + ++ Y L N    +FSI+   G I L + LD E +  Y  T+ A D      +T 
Sbjct: 3153 DAGLNRKISYSLLNSADGQFSINELSGIIQLEKPLDRELQAVYTLTLKAVDHGLPRRLTA 3212

Query: 125  SATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAA--DGDKGDRVTLS 182
            ++T+ ISV+++ND  P F Y +Y   +      D+  G+ + +V AA  D +    +T S
Sbjct: 3213 TSTIVISVLDINDNPPVFEYREYGATVSE----DILIGTEVLQVYAASRDIEANAEITYS 3268

Query: 183  -LRGPYEKMFSIND-SGHISIVD-LSALNTSTIQLVVVATDTGNP 224
             + G     FSI+  +G I I++ L   ++    L V ATD G P
Sbjct: 3269 IISGNEHGKFSIDSKTGAIFIIENLDYESSHEYYLTVEATDGGTP 3313



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 78/303 (25%), Positives = 143/303 (47%), Gaps = 32/303 (10%)

Query: 5    DDFLQPI-TLVVRAIQYDNQDRY-ALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNY 62
            D  LQ + TL ++A+ +    R  A +T+++S    +     F   EY  +  E++ +  
Sbjct: 3188 DRELQAVYTLTLKAVDHGLPRRLTATSTIVISVLDINDNPPVFEYREYGATVSEDILIGT 3247

Query: 63   VLLTVTTNKPRDLRVKYWLS------NDYGERFSI-SRQGDISLMQCLDYETEDSYRFTV 115
             +L V     RD+     ++      N++G +FSI S+ G I +++ LDYE+   Y  TV
Sbjct: 3248 EVLQVYAAS-RDIEANAEITYSIISGNEHG-KFSIDSKTGAIFIIENLDYESSHEYYLTV 3305

Query: 116  YATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAAD 172
             ATD     ++  ATV+I+V ++ND  P F    Y   +    + + +  +V+   + AD
Sbjct: 3306 EATDGGTPSLSDVATVSINVTDINDNTPVFSQDTYTAVVSEDAVLEQSVITVMA--DDAD 3363

Query: 173  GDKGDRVTLS-LRGPYEKMFSINDS-GHISIVDLSALNTSTIQ---LVVVATDTGNPPRQ 227
            G     +  + + G     F+I+ + G + +  L  L+  TI    L V A+D G+PPR 
Sbjct: 3364 GPSNSHIHYAIIDGNQGSPFTIDPARGEVKVTKL--LDRETISGYTLTVQASDNGSPPRV 3421

Query: 228  ASVPAIMHFPEAIVQQASSKLNSGTSSTVLIILGVVLIVLGFVIILLILYIHKNKHTKNN 287
            A+    +   +  V   +   + G  S ++     V    GF ++ L++    ++ + +N
Sbjct: 3422 ATTTVNIDVSD--VNDNAPVFSRGNYSLIIQENKPV----GFSVLQLVV---TDRDSSHN 3472

Query: 288  GPP 290
            GPP
Sbjct: 3473 GPP 3475



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 57/196 (29%), Positives = 93/196 (47%), Gaps = 23/196 (11%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLS-NDYGERFSIS-RQGDISLMQC 102
            F K  YS    E+  ++  ++ V  N P  L+V Y ++  D   +F+++   G IS++  
Sbjct: 2182 FEKPFYSAEIPESAQMHSPVVHVQANSPEGLKVHYSITEGDPFSQFTVNFNTGVISVVAP 2241

Query: 103  LDYETEDSYRFTVYATDTLMTTSATVNISVV--NVNDWDPRFRYPQYELFLPHIPLADLT 160
            LD+E+  +Y+ ++ ATD+L    A V + ++  ++ND  P F    Y         A L+
Sbjct: 2242 LDFESHPAYKLSIQATDSLTGAHAEVFVDIIVEDINDNPPVFAQQSY--------AATLS 2293

Query: 161  PGSVIG----KVEAADGDK--GDRVTLSLRGPYEK---MFSIND-SGHISIVD-LSALNT 209
              SVIG    +V A D D      ++  + G + K    F I+  +G IS+V  L     
Sbjct: 2294 EASVIGTSVVQVRATDADSEPNRGISYHMVGNHSKSHDHFHIDSGTGLISLVRTLDYEQF 2353

Query: 210  STIQLVVVATDTGNPP 225
               Q+ V A D G PP
Sbjct: 2354 RQHQISVRAVDGGMPP 2369



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 56/237 (23%), Positives = 101/237 (42%), Gaps = 37/237 (15%)

Query: 11   ITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTN 70
             T  VRA+   +  R ++  + V      +R  +FS+  Y+ +  E++P+   +  +   
Sbjct: 2669 FTFFVRAVDNGSPQRESVVPVCVKVLPPEIRLPRFSEPFYTYTVSEDVPIGTEIDLIRAE 2728

Query: 71   KPRDLRVKYWLSN----DYGERFSISRQ-GDISLMQCLDYETEDSYRFTVYAT----DTL 121
                +       N    +  E F I RQ G + L + LD+ET   ++F+V A     D  
Sbjct: 2729 HSGTVLYSLVKGNTPESNRDEFFVIDRQSGRLKLEKSLDHETTKWFQFSVLARCSHGDYE 2788

Query: 122  MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTL 181
            +  S  V+I V + ND  P      YE F+    + +L  GS + ++ A+D D G    +
Sbjct: 2789 LVASVDVSIQVKDANDNSPVLESSPYEAFI----VENLPAGSRVIQIRASDLDSGSNGQV 2844

Query: 182  SLRGPYEKMFSINDSGHISIVDLSALNTST----------------IQLVVVATDTG 222
                    M++++ S  + +++  A+N  T                 Q+ VVA+D G
Sbjct: 2845 --------MYNLDQSQSVDVIESFAINMETGWITTLRELDHEKRDSYQIKVVASDHG 2893



 Score = 47.8 bits (112), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 42/137 (30%), Positives = 68/137 (49%), Gaps = 16/137 (11%)

Query: 50   YSVSALENLPVNYVLLTVTT---NKPRDLRVKYWL----SNDYGERFSISRQ-GDISLMQ 101
            Y    +ENLP    ++ +     +   + +V Y L    S D  E F+I+ + G I+ ++
Sbjct: 2814 YEAFIVENLPAGSRVIQIRASDLDSGSNGQVMYNLDQSQSVDVIESFAINMETGWITTLR 2873

Query: 102  CLDYETEDSYRFTVYATD----TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLA 157
             LD+E  DSY+  V A+D      ++++A V+++V +VND  PRF    Y+  +      
Sbjct: 2874 ELDHEKRDSYQIKVVASDHGEKVQLSSTAIVDVTVTDVNDSPPRFTAEIYKGTVSE---- 2929

Query: 158  DLTPGSVIGKVEAADGD 174
            D  PG VI  V   D D
Sbjct: 2930 DDPPGGVIAIVSTTDAD 2946



 Score = 45.8 bits (107), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 63/242 (26%), Positives = 107/242 (44%), Gaps = 32/242 (13%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTTNKPRDL----RVKYWLSNDYGERFSI-SRQGDIS 98
            +F +  Y V   E+  +N  ++ V     +DL     V+Y +  D  ++FSI S  G + 
Sbjct: 821  EFLQESYFVEVSEDKEINSEIIQVEATD-KDLGPNGHVRYSILTD-TDKFSIDSMTGVVR 878

Query: 99   LMQCLDYETEDSYRFTVYATDTL-----MTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
            ++  LD E +  +   V A D       + ++  + +S+ +VND  P+F  P Y + +  
Sbjct: 879  ILNPLDREEQHVHYLKVEARDQAREEPQLLSTVILKVSLEDVNDNPPKFIPPNYRVKV-- 936

Query: 154  IPLADLTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSIND-SGHISIV-DLSALNT 209
                DL  G++I  +EA D D G   +V  SL    E  F ++  SG + IV  L     
Sbjct: 937  --REDLPEGTIIMWLEAHDPDLGQSSQVRYSLLDHGEGNFDVDKLSGAVRIVQQLDFEKK 994

Query: 210  STIQLVVVATDTGNPPRQASVPAI----------MHFP--EAIVQQASSKLNSGTSSTVL 257
                L V A D G P   +S   +          +H P   + V++ + K N+   S+V+
Sbjct: 995  QVYNLTVRAKDKGKPVSLSSTCYVEVEVIDVNENLHPPVFPSFVEKGAVKENAPVGSSVM 1054

Query: 258  II 259
             +
Sbjct: 1055 KV 1056



 Score = 44.3 bits (103), Expect = 0.094,   Method: Compositional matrix adjust.
 Identities = 48/195 (24%), Positives = 87/195 (44%), Gaps = 14/195 (7%)

Query: 12   TLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLL--TVTT 69
            TL V+A    +  R A  T+ +  +  +     FS+  YS+   EN PV + +L   VT 
Sbjct: 3407 TLTVQASDNGSPPRVATTTVNIDVSDVNDNAPVFSRGNYSLIIQENKPVGFSVLQLVVTD 3466

Query: 70   NKPRDLRVKYWLS----NDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDT---LM 122
                     ++ S    N+ G  F +++QG +     ++ + +D Y   V   D     +
Sbjct: 3467 RDSSHNGPPFFFSIVSGNEEGA-FEVNQQGALLTAAAINRKVKDHYLLHVKVADNGKPQL 3525

Query: 123  TTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS 182
            ++   ++I V+  + + P       E+F+      +   G VIGK+ A D D  D +T S
Sbjct: 3526 SSLTYIDIKVIEESVYPPAIL--PLEIFI--TAFGEEYSGGVIGKIHATDQDVYDTLTYS 3581

Query: 183  LRGPYEKMFSINDSG 197
            L    + +FS++ +G
Sbjct: 3582 LDPQMDNLFSVSSTG 3596



 Score = 42.0 bits (97), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 55/191 (28%), Positives = 84/191 (43%), Gaps = 30/191 (15%)

Query: 56   ENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYG-ERFSISRQ-GDISLMQCLDYETEDS 110
            EN PV   ++ V+    +  RD  + Y + +  G   F I  + G I     LD E+   
Sbjct: 1045 ENAPVGSSVMKVSARDEDTGRDGEIHYSIRDGSGVGVFRIDEETGVIETSDRLDRESTSH 1104

Query: 111  YRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSV-IG 166
            Y  TVYA+D     +++   V I V +VND  P+   P   ++ P I   + +P  V + 
Sbjct: 1105 YWLTVYASDQGVVPLSSFVEVYIEVEDVNDNAPQTSEP---VYYPEI--MENSPKDVSVV 1159

Query: 167  KVEAADGDKGDRVTLSLRGPYEKMFSINDSGHISIVDLSALNTSTIQ-----------LV 215
            ++EA D D      L+      K+ S N  G  SI   + L T+T +           L 
Sbjct: 1160 QIEAFDPDSSSDDKLTY-----KITSGNPQGFFSINSKTGLITTTARKLDREQQDEHILE 1214

Query: 216  VVATDTGNPPR 226
            V  TD G+PP+
Sbjct: 1215 VTVTDNGSPPK 1225



 Score = 38.9 bits (89), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 55/215 (25%), Positives = 89/215 (41%), Gaps = 19/215 (8%)

Query: 24  DRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLR---VKYW 80
           DR A   ++V     +    +F++  Y  S  EN+P+   +++V+   P +     V Y 
Sbjct: 442 DRKASTRVLVKVLSANSHPPEFTQTAYKASFDENVPIGTTVMSVSAVDPDEGENGYVTYS 501

Query: 81  LSNDYGERFSISR-QGDISLMQCLDYE-TEDSYRFTVYATDTLMTTSATVNI----SVVN 134
           ++N     F I+   G +S  + LDYE     Y   + A+D        V I    ++ N
Sbjct: 502 IANLNHVPFVINHFTGAVSTSENLDYELMPRVYTLRIRASDWGSPYRREVEILATLTLNN 561

Query: 135 VNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYE-KMFSI 193
           +ND  P F     E  +P     DL  G  I  V A D D+   V   +    +  +FS+
Sbjct: 562 LNDNTPLFEKIHCEGTIPR----DLGVGEQITTVSAIDADELQLVRYQIEAGNDLDLFSL 617

Query: 194 NDSGHI-----SIVDLSALNTSTIQLVVVATDTGN 223
           N +  +     S++D      S   L + ATD  N
Sbjct: 618 NPNSGVLSLKQSLMDGLGAKVSFHSLRITATDGEN 652



 Score = 38.1 bits (87), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 35/121 (28%), Positives = 58/121 (47%), Gaps = 9/121 (7%)

Query: 83   NDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRF 142
            ND+       + G I+L     +  + SY   V A+D +  +SA V+++V+  N   P F
Sbjct: 2433 NDHKNFVIDGKTGIITLSNLRRHALKPSYTLQVSASDGVFRSSAQVHVTVIGGNLHSPMF 2492

Query: 143  RYPQYELFLPHIPLADLTP-GSVIGKVEAADGDKG--DRVTLSLRGPYEK-MFSINDSGH 198
               +YE     + LA+  P  +++ +V+AAD D G    VT  +   + K  F  N+ G 
Sbjct: 2493 LQNEYE-----VELAENAPVHTLVTEVKAADRDLGIYGHVTYHIVNDFAKDRFYTNERGQ 2547

Query: 199  I 199
            I
Sbjct: 2548 I 2548


>gi|47227082|emb|CAG00444.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 2270

 Score = 65.1 bits (157), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 44/152 (28%), Positives = 84/152 (55%), Gaps = 12/152 (7%)

Query: 51   SVSALENLPVNYVLLTVTT---NKPRDLRVKYWL-SNDYGERFSIS-RQGDISLMQCLDY 105
            +VS +E+ PV +V+L V     ++  + RV Y + + +   RFS++   G +S+++ LD 
Sbjct: 1014 AVSVMEDQPVGFVILYVMARDEDEGENGRVSYRIQAGNTAGRFSLNPNTGSLSILKALDR 1073

Query: 106  ETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPG 162
            E ++ +  T+ A D     ++TS  +++ V++VND  P F+  ++E  +    + +  PG
Sbjct: 1074 EEQEVFNLTIVAEDHGIPQLSTSQVLSVRVIDVNDEAPVFQRAEFEALV----IENKGPG 1129

Query: 163  SVIGKVEAADGDKGDRVTLSLRGPYEKMFSIN 194
            + + KV A D D+G    ++  G  E+ F IN
Sbjct: 1130 TTVLKVTAVDRDQGSNGHVTYGGVTEEGFVIN 1161



 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 63/201 (31%), Positives = 88/201 (43%), Gaps = 18/201 (8%)

Query: 30  TLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTV---TTNKPRDLRVKYWLSNDY- 85
           TL+V       R   F    Y V   EN P+N   L V    T       + Y L  D  
Sbjct: 411 TLVVHIQAQDARGPNFDTLTYRVELRENTPLNTQFLQVRALNTEASGGSSISYHLRPDGD 470

Query: 86  GERFSI-SRQGDISLMQCLDYETEDSYRFTVYATD----TLMTTSATVNISVVNVNDWDP 140
              F I S  G I +   LD E +D Y  TV A+        T SATV ++V + ND  P
Sbjct: 471 AAGFGIMSDSGWIFVRSSLDREVKDMYLLTVLASSGPGGAGRTGSATVRVTVTDENDNSP 530

Query: 141 RFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPY-EKMFSIN-DSGH 198
           R    Q  +FL      +L  G+  G+V A D D G    L+ +  + ++ F IN  +G 
Sbjct: 531 RLS--QERVFL--AVRENLLAGTGFGRVSAIDRDAGLNARLTYKLLHTDRHFQINSQTGK 586

Query: 199 --ISIVDLSALNTS-TIQLVV 216
             I I D+  L++S  +QL++
Sbjct: 587 IIIPITDIKELHSSIRVQLLI 607



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 45/142 (31%), Positives = 68/142 (47%), Gaps = 11/142 (7%)

Query: 92  SRQGDISLMQCLDYETEDSYRFTVYATDTLM---TTSATVNISVVNVNDWDPRFRY--PQ 146
           S  G+IS    LD E + SY+  V   D      + + T +I+V++ ND  P F +  P 
Sbjct: 629 STSGEISTRLALDREHQSSYQLVVVVQDGGTPPRSATGTAHITVLDENDNAPTFSHTRPD 688

Query: 147 YELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTL--SLRGPYEKMFSIND-SGHISIVD 203
            EL L  +    L  G+V+G V A D D+G+  T+  SL G   + F++N  +G +    
Sbjct: 689 RELLLQVV--EGLPSGTVLGTVTAKDPDEGENGTVHYSLSGARAERFTLNPMTGELKAAS 746

Query: 204 -LSALNTSTIQLVVVATDTGNP 224
            L     S    +V A D G+P
Sbjct: 747 PLRWAERSEYTFMVTAADHGSP 768



 Score = 43.9 bits (102), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 45/173 (26%), Positives = 75/173 (43%), Gaps = 14/173 (8%)

Query: 12   TLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNY---VLLTVT 68
            T++++A   D Q  +ALA ++V     +     F     + S  EN P N    VL  + 
Sbjct: 1629 TVIIQAT--DGQGHFALAPVVVEVKDVNDNHPFFPVEVLTASIRENQPANSAVTVLHAID 1686

Query: 69   TNKPRDLRVKYWLSNDYG---ERFSIS-RQGDISLMQCLDYETEDSYRFTVYATDTL-MT 123
             +      +KY++    G   E FS+    G+I      D+E  +S+ F   A D+   +
Sbjct: 1687 HDTGVFGHLKYFMLERTGTGKESFSVDPNSGEIRSKIPFDFEKINSFNFVAMAIDSGNHS 1746

Query: 124  TSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG 176
             + TV + V   +++DP F    +   +P         G  IG+V+A D D G
Sbjct: 1747 ATVTVQVFVTGEDEYDPVFLSQDFSFEVPE----GAKKGQSIGQVQANDEDGG 1795



 Score = 42.0 bits (97), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 50/158 (31%), Positives = 73/158 (46%), Gaps = 13/158 (8%)

Query: 79   YWLSNDYGERFSISRQ-GDISLMQCLDYETEDSYRFTVYATD----TLMTTSATVNISVV 133
            Y+LS D    F++    G I+    LD E   +Y F V+A D        TSA V ++V+
Sbjct: 1261 YFLSQDAHGAFTVDENTGVITTSAALDREKWAAYTFQVFAVDLSPAEPRNTSAQVTVTVL 1320

Query: 134  NVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYE-KMFS 192
            +VND  P F   Q  L    I ++      V+  ++A D D G   ++  R     K FS
Sbjct: 1321 DVNDNAPVFI--QDPLV---IEVSIRHSQRVLATMKAEDKDFGANGSVFYRFATPVKGFS 1375

Query: 193  IND-SGHISIVD-LSALNTSTIQLVVVATDTGNPPRQA 228
            IN  +G I   + L  L  +   L+V A D G+P + A
Sbjct: 1376 INSLTGEIQATEPLQDLTQAQRTLIVEAMDQGSPAQSA 1413


>gi|363738857|ref|XP_003642082.1| PREDICTED: uncharacterized protein LOC100857645 [Gallus gallus]
          Length = 1680

 Score = 65.1 bits (157), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 51/199 (25%), Positives = 90/199 (45%), Gaps = 27/199 (13%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDL---RVKYWLSNDYGERFSI----SRQGDI 97
            F++  Y    LEN P   V+L V  N   +     + Y  S   G R S+    S+ G+I
Sbjct: 1105 FTQKLYIAHVLENAPEGSVVLRVVANDADEGVNGDISYQFSQSVGHRHSLFTINSKTGEI 1164

Query: 98   SLMQCLDYETEDSYRFTVYATD-TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
             + + LD+ETE  ++ TV A D   +++   V + V++VND  P      +   +P    
Sbjct: 1165 GIAKPLDFETEKKHKLTVQAVDGGGLSSMCNVIVEVLDVNDNAPEIVVSSFSSPIPE--- 1221

Query: 157  ADLTPGSVIGKVEAADGDKG----------DRVTLSLRGPYEKMFSINDSGHISIVDLSA 206
             ++ PG+VI      D D G          ++++ +LR  ++  + +     +++  L  
Sbjct: 1222 -NVEPGTVIALFAVRDQDSGVNGEITCALEEQLSFALRPAFKNYYEL-----VTVSTLDR 1275

Query: 207  LNTSTIQLVVVATDTGNPP 225
               +   +VV A D G+PP
Sbjct: 1276 EERAQHMVVVTAADAGSPP 1294



 Score = 42.0 bits (97), Expect = 0.45,   Method: Composition-based stats.
 Identities = 50/187 (26%), Positives = 86/187 (45%), Gaps = 21/187 (11%)

Query: 92   SRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYE 148
            S  G + +++ LDYE        V A D     +++S +V + VV+ ND  P   +P  +
Sbjct: 1372 SESGGVFVLRPLDYEQLRQLEVVVSAADAGSPPLSSSVSVRLLVVDENDNAPLVLHPSAQ 1431

Query: 149  LFLPHIPLADLTP-----GSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-DSGHI 199
               P  P ++L P     G ++ KV A D D G    LS   LR     +F++   SG +
Sbjct: 1432 DSSP--PSSELVPAGAEAGDLVSKVVAVDADSGQNSWLSYQLLRATEPGLFAVGAQSGEV 1489

Query: 200  SIV-DLSALNTSTIQLVVVATDTGNPPRQASVP-AIMHFP-----EAIVQQASSKLNSGT 252
             +    +  + +  +LVV+  D G PP  A+   +++  P     +   Q  ++  + G+
Sbjct: 1490 RLRRPPTERDAAKQKLVVLVRDNGRPPLSATAALSVLLVPGSWDAQLPQQSPAAGEDDGS 1549

Query: 253  SSTVLII 259
             +T LII
Sbjct: 1550 LTTSLII 1556



 Score = 39.7 bits (91), Expect = 2.7,   Method: Composition-based stats.
 Identities = 35/141 (24%), Positives = 60/141 (42%), Gaps = 12/141 (8%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKP---RDLRVKYWLSN-DYGERFSISRQGDISLM 100
           FS+  Y V   EN P   +++ V+   P    + +V+Y  +    G +       D  ++
Sbjct: 168 FSREVYEVRVAENSPPGQLVVRVSAADPDEGSNGKVRYTFTQASAGSQHLFDLNADSGVI 227

Query: 101 QC---LDYETEDSYRFTVYATD-TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
           +    LD+E   S+   V ATD   +   + V++ V++VND  P          +P    
Sbjct: 228 RVSGKLDFEEAKSHELVVRATDGGGLYAYSKVHVEVLDVNDNAPEIALSSVSASIPE--- 284

Query: 157 ADLTPGSVIGKVEAADGDKGD 177
            D  P +V+  +   D D GD
Sbjct: 285 -DAPPRTVVALLSVRDRDSGD 304



 Score = 39.3 bits (90), Expect = 2.9,   Method: Composition-based stats.
 Identities = 36/133 (27%), Positives = 61/133 (45%), Gaps = 17/133 (12%)

Query: 103  LDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADL 159
            LD E    +   V A D     +T++ T ++ + +VND  P F    Y +++      + 
Sbjct: 1273 LDREERAQHMVVVTAADAGSPPLTSTHTFSVDISDVNDNAPVFNQTSYTMYVHE----NN 1328

Query: 160  TPGSVIGKVEAADGDKGDRVTLSL-----RGPYEK---MFSIN-DSGHISIV-DLSALNT 209
             P  ++G V+A D D G    +S      RGP E+     S+N +SG + ++  L     
Sbjct: 1329 APALLVGAVKATDADAGPNAKVSYSVVPARGPEEEPCSCVSVNSESGGVFVLRPLDYEQL 1388

Query: 210  STIQLVVVATDTG 222
              +++VV A D G
Sbjct: 1389 RQLEVVVSAADAG 1401


>gi|292616384|ref|XP_683121.4| PREDICTED: protocadherin-7, partial [Danio rerio]
          Length = 1101

 Score = 65.1 bits (157), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 61/196 (31%), Positives = 90/196 (45%), Gaps = 14/196 (7%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGERFSI-SRQGDISLM 100
           FSK+   VS  EN      ++TV     +  ++  + Y L +     FSI +  GDI + 
Sbjct: 506 FSKSTVEVSFPENNAPGERVVTVVALDADSGKNAEISYSLDSSVNGIFSIDADTGDIRVN 565

Query: 101 QCLDYETEDSYRFTVYATDTLMTT---SATVNISVVNVNDWDPRFRYPQYELFLPHIPLA 157
             LD E  + Y F V A D  M     SATV + V + ND +P+F    +  ++      
Sbjct: 566 TILDREQTERYEFKVIAKDKGMPVLQGSATVVVLVADKNDNEPKFMQDVFTFYIQE---- 621

Query: 158 DLTPGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSI-NDSGHI-SIVDLSALNTSTIQL 214
           +L P S +G +   D DKG    +SL     E +FSI N++G I S +       +    
Sbjct: 622 NLQPNSPVGMITVMDADKGQNADMSLYIEEEENIFSIDNNTGTIFSNMAFDREQRNNYSF 681

Query: 215 VVVATDTGNPPRQASV 230
            V A D G+PPR A+ 
Sbjct: 682 RVKAVDGGDPPRSATA 697



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 76/315 (24%), Positives = 139/315 (44%), Gaps = 42/315 (13%)

Query: 29  ATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVT---TNKPRDLRVKYWLSNDY 85
           AT++V  A  +  E +F ++ ++    ENL  N  +  +T    +K ++  +  ++  + 
Sbjct: 594 ATVVVLVADKNDNEPKFMQDVFTFYIQENLQPNSPVGMITVMDADKGQNADMSLYIEEEE 653

Query: 86  GERFSISRQ-GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPR 141
              FSI    G I      D E  ++Y F V A D      + +ATV++SV++VND  P 
Sbjct: 654 -NIFSIDNNTGTIFSNMAFDREQRNNYSFRVKAVDGGDPPRSATATVSLSVMDVNDNPPT 712

Query: 142 FRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR----GPYEKMFSIND-S 196
             +P    +    P +++   +V+  V A D D G    LS R     P+ K+F ++  +
Sbjct: 713 VLFPMNNSYTLLPPSSNIR--TVVRTVSATDTDTGVNANLSYRIVGGNPF-KLFDMDAWT 769

Query: 197 GHISIV-DLSALNTSTIQLVVVATDTGNPPRQASVPAIMHFPEA----------IVQQAS 245
           G IS+V  L   +    +LVV   D+G P +  +    ++  E           + +  S
Sbjct: 770 GVISLVGKLEQKHFGLHRLVVQVNDSGVPSQSTTTLVHIYVNETLFNSTIVEAQVAKSLS 829

Query: 246 SKLNSGTSS---------TVLIILGVVLIVLGFVIILLILYIHKNKHTKN-NGPPGSSHS 295
           + LN+  +           + I +GVV  ++  ++I+L++ + +    KN NG       
Sbjct: 830 TPLNADIAGDPNYDLGKQRLSIAIGVVSGIMTVILIILVVVMARYCRPKNKNGYEAGKKD 889

Query: 296 KNDSFLSNVILPEKH 310
             D F      P++H
Sbjct: 890 HEDFF-----TPQQH 899



 Score = 48.5 bits (114), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 41/158 (25%), Positives = 74/158 (46%), Gaps = 22/158 (13%)

Query: 93  RQGDISLMQCLDYETEDSYRFTVY---ATDTLMTTSATVNISVVNVNDWDPRFRYPQYEL 149
           +Q  + +   LD E  DSY  T+      D   ++ A + + + +VND  PRF    YE 
Sbjct: 227 KQPQLIIKGALDREQRDSYELTLRVRDGGDPPRSSQAILRVMITDVNDNTPRFEKSVYEA 286

Query: 150 FLPHIPLADLTPGSVIGKVEAADGDKG---------DRVTLSLRGPYEKMFSINDS-GHI 199
            LP     + +PG+ I +++A D D G            T S+R    ++  +++S G +
Sbjct: 287 DLPE----NSSPGAPILQLKAGDTDVGVNGQIEYVFGAATESVR----RLLRLDESTGWL 338

Query: 200 SIVD-LSALNTSTIQLVVVATDTGNPPRQASVPAIMHF 236
           S++  +   + S ++  V+A D G PP+      I++ 
Sbjct: 339 SVLHRIDREDVSQLRFTVMARDRGQPPKTDKATVIINI 376


>gi|195437548|ref|XP_002066702.1| GK24627 [Drosophila willistoni]
 gi|194162787|gb|EDW77688.1| GK24627 [Drosophila willistoni]
          Length = 3471

 Score = 65.1 bits (157), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 63/216 (29%), Positives = 94/216 (43%), Gaps = 29/216 (13%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGERFSISRQ---GDIS 98
            F ++EY+V+  E  PVN  ++ V     +   + R+ Y + +   +  SIS      DIS
Sbjct: 1002 FERDEYAVNISEVRPVNTQIIQVNATDRDTGNNARLTYRIVDAGVDNVSISNSHALSDIS 1061

Query: 99   -------------LMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRF 142
                         L   LD E  D Y+ TV ATD           + I V++ ND DP+F
Sbjct: 1062 QHFGVFPNSGWLYLRSPLDREQRDRYQLTVMATDNGTPAAQAKTRIVIRVLDANDNDPKF 1121

Query: 143  RYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSIND-SGHIS 200
            +   YE  +      ++  GS +G V+A+D D GD   +     P    F I   +G I+
Sbjct: 1122 KRSNYEFRIEE----NMRRGSKVGIVQASDLDLGDNAAIRYSLMPQNSSFQIQPITGEIT 1177

Query: 201  IVD-LSALNTSTIQLVVVATDTGNPPRQASVPAIMH 235
              + L         L+V A D G+P R A VP  +H
Sbjct: 1178 TKEPLDREQRELYDLLVEARDQGSPQRSARVPVRIH 1213



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 62/213 (29%), Positives = 93/213 (43%), Gaps = 20/213 (9%)

Query: 29  ATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGER 88
           AT++V+    +  E  F ++ Y+V+  EN P+   +L V+ + P D  V   ++   GE 
Sbjct: 555 ATVLVTIHDVNDNEPIFDQSFYNVTIAENEPIGRCILKVSASDP-DCGVNAMVNYTLGEG 613

Query: 89  FS-------ISRQGDISLMQCLDYETEDSYRFTVYATDT-LMTTSATVNISVVNVNDWDP 140
           F         S  G+I +   LDYE   SY F V ATD   ++T+A + + + ++ND  P
Sbjct: 614 FKHLTEFEVRSASGEICIAGELDYEQRSSYEFPVLATDRGGLSTTAMIKMQLTDINDNRP 673

Query: 141 RFRYPQYEL----FLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR---GPYEKMFSI 193
            F   +Y +    F            + I  V A D D GD   +S R   G    +F I
Sbjct: 674 VFYPREYNVSLKEFQSQSSQGQTNSNAPIVAVVATDPDSGDFGQVSYRIVNGNEAGIFRI 733

Query: 194 NDS-GHISIVD---LSALNTSTIQLVVVATDTG 222
             S G I +     LS        L + ATD G
Sbjct: 734 ERSTGEIFVARPEMLSVRQQPKHMLNISATDGG 766



 Score = 51.6 bits (122), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 51/168 (30%), Positives = 82/168 (48%), Gaps = 22/168 (13%)

Query: 76   RVKYWLSNDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATD----TLMTTSATVNI 130
            R+ Y L+N+   +F+I S+ G I+ +  LD E + SY F   ATD     + +    V I
Sbjct: 1944 RLVYALANETQWQFAIDSKSGLITTVGKLDRELQSSYSFMALATDGGRYEVRSARVPVQI 2003

Query: 131  SVVNVNDWDPRF-RYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEK 189
            +V++VND  P F RYP    ++  +P + + PG  + KV+A D D+     ++       
Sbjct: 2004 NVLDVNDNKPVFERYP----YMAQVP-SLIQPGQTLVKVQAHDLDENLNGEITYSLKSGS 2058

Query: 190  M---------FSIN-DSGHISIVD-LSALNTSTIQLVVVATDTGNPPR 226
                      F IN  +G +S    L++     IQL ++A D GNP +
Sbjct: 2059 SSLKGNQLGKFRINPHTGALSATQSLASEAGHLIQLEIMARDKGNPSK 2106



 Score = 47.4 bits (111), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 63/223 (28%), Positives = 100/223 (44%), Gaps = 37/223 (16%)

Query: 22  NQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWL 81
           NQ RY       S  GTS+ ++  S  +    A EN  V Y +    ++K +  R+    
Sbjct: 247 NQSRYFATVPENSTVGTSVLQVYASDTD----ADENGLVEYAINRRQSDKEQMFRID--- 299

Query: 82  SNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDW 138
                     S+ G I + + LD+ET++ +   V A D     + T+A V+I V +VND 
Sbjct: 300 ----------SQTGAIFINKPLDFETKELHELVVVAKDHGEQPLETTAFVSIRVTDVNDN 349

Query: 139 DPRFRYPQYELFLPHIPLADLT----PGSVIGKVEAADGDKGDR---VTLSLRGP--YEK 189
            P        +FL     A ++    PG  + ++   D D       V +SL G   +  
Sbjct: 350 QPTINV----IFLSDDASAKISESAQPGEFVARISVHDPDSKTEYANVNVSLNGGAGHFA 405

Query: 190 MFSINDSGHISIVDLSALNTSTIQ---LVVVATDTGNPPRQAS 229
           + + ++S ++ IV+L  L+  TI    L VVATD G PP  A+
Sbjct: 406 LTTRDNSIYLVIVNL-PLDRETISNYTLSVVATDKGTPPLHAT 447



 Score = 47.0 bits (110), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 42/159 (26%), Positives = 73/159 (45%), Gaps = 19/159 (11%)

Query: 89   FSISR-QGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQY 147
            F++ R  G + L + LDYE++  Y+  + A+D        + + V N ND  P F   Q 
Sbjct: 2449 FALDRYSGKLVLKRRLDYESQQEYQLEIIASDAAHEARTMLTLRVGNENDNAPVFLAQQP 2508

Query: 148  ELFLPHIPLA-DLTPGSVIGKVE-------AADGDKGDRVTLSLRGPYEKMFSINDSGHI 199
              +   +PL  D    ++   VE        ADGD   +++ S+  P    F++N S  +
Sbjct: 2509 PAYFAQLPLVEDEDDNNLRMDVELVTVNATDADGDDISQISYSIH-PTVIGFNVNPSSGV 2567

Query: 200  SIVDLSALNTSTIQ---------LVVVATDTGNPPRQAS 229
              V++S L + ++          + VVA D+G P + +S
Sbjct: 2568 VSVNMSRLTSESLSPPSPNGDYFIRVVAQDSGKPKQSSS 2606



 Score = 46.6 bits (109), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 73/308 (23%), Positives = 125/308 (40%), Gaps = 50/308 (16%)

Query: 8    LQPITLVVRAIQYDNQDRYALATLIVSKA-----GTSLRELQFSKNEYSVSALENLP--- 59
            LQP  L +   + DN+ R+ L   I   A     GTS+   Q        + L+  P   
Sbjct: 2819 LQPFHLDLYD-ENDNEPRFPLTEYIHFLAENEPMGTSIFRAQ-------ATDLDRGPFGQ 2870

Query: 60   VNYVLLTVTTNKPRDLRVKYWLSNDYGERFSISRQ-GDISLMQCLDYETEDSYRFTVYAT 118
            +NY L    +N   D         D    F I  Q G ++     DYE    Y   + AT
Sbjct: 2871 LNYSLAASPSNADGD---------DEWRLFHIDPQSGVVTSSGVFDYEQRQRYDLELRAT 2921

Query: 119  DTLMTTS-ATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG- 176
            D    T+   + + + + +++ P+F    Y   LP      L  G V+G+V+A+D D G 
Sbjct: 2922 DMGGKTARVALRVEIESRDEFQPQFTERTYRFVLP--AAVALPAGFVVGQVQASDSDSGP 2979

Query: 177  -DRVTLSLRGPYEKMFSINDSGHISIV------DLSALNTSTIQLVVVATDTGNPPRQAS 229
              RV   L  P++  F +N S    +V      + + +    I LV+ A+ +G P   +S
Sbjct: 2980 DGRVVYQLSAPHQH-FKVNRSSGAVLVKRKLKLEDAEVGGGDISLVISAS-SGRPNSLSS 3037

Query: 230  VPAIMHFPEAIVQQASSKLNSGTSS----------TVLIILGVVLIVLGFVIILLILYIH 279
            + A++      +   S+ L S              T+ +++  +L++     I L +++ 
Sbjct: 3038 M-AVVEITLDPLAHPSTNLASSIGGGVGGGGFGDWTIGLLIAFLLVLCAAAGIFLFVHMR 3096

Query: 280  KNKHTKNN 287
             N+    N
Sbjct: 3097 SNRGRARN 3104



 Score = 46.2 bits (108), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 60/224 (26%), Positives = 99/224 (44%), Gaps = 19/224 (8%)

Query: 22   NQDRYALATLIVSKAGTSLRELQFSKNE-YSVSALENLPVNYVLLTVTTNKPRDLRVKYW 80
            N   + +AT++++    +    +F     Y +S  EN   + +   V T+    +     
Sbjct: 1782 NGQHFDVATVVITIGDVNDHAPEFRPGSCYGLSVPENSETSVIHTVVATDLDEGVNADIL 1841

Query: 81   LS---NDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATD----TLMTTSATVNISV 132
             S    + G +FSI +R G++S  + LD E    Y   V A+D      +     + I V
Sbjct: 1842 YSIIGGNLGNKFSIDARTGELS-ARSLDREQHSRYTLQVQASDRGKPNSLQGQCNITILV 1900

Query: 133  VNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKM 190
             + ND  PRF  P+Y   + +I   D   GS + +++A D D G   R+  +L    +  
Sbjct: 1901 EDQNDNAPRFELPKY---IANI-AEDAAIGSSVVRIKANDADLGINARLVYALANETQWQ 1956

Query: 191  FSIND-SGHISIV-DLSALNTSTIQLVVVATDTGN-PPRQASVP 231
            F+I+  SG I+ V  L     S+   + +ATD G    R A VP
Sbjct: 1957 FAIDSKSGLITTVGKLDRELQSSYSFMALATDGGRYEVRSARVP 2000



 Score = 44.3 bits (103), Expect = 0.098,   Method: Compositional matrix adjust.
 Identities = 60/216 (27%), Positives = 94/216 (43%), Gaps = 38/216 (17%)

Query: 31   LIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGERFS 90
            L VS+A TS+  + ++       A  N  + Y LL+ + +        ++ +   GE F+
Sbjct: 1455 LNVSEA-TSVGTIIYNFTATDADAGHNAELQYRLLSYSPH--------HYPNESVGEIFA 1505

Query: 91   I-SRQGDISLMQCLDYETEDSYRFTVYATDT------LMTTSATVNISVVNVNDWDPRFR 143
            + S  G +SL   LD+E+   Y   V A D        + +S T+ + V + ND  P+F 
Sbjct: 1506 MDSLTGSLSLQSPLDFESIKEYLLVVQALDQSSNVTERLQSSVTMRLRVTDANDNPPQFM 1565

Query: 144  YPQYELFLPHIPLAD-LTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-DSGH 198
             P      P + ++D +  G V+  V A D DKG    +S   L G  E  F IN ++G 
Sbjct: 1566 APG-----PLVYVSDAIRIGEVVTHVVAMDPDKGANGQISYSILSGNGEGRFRINSETGE 1620

Query: 199  ISIV----------DLSALNTSTIQLVVVATDTGNP 224
            I +V          DL         L++ A D G P
Sbjct: 1621 IELVKSLPVSAGVDDLD--KNGRFNLLIRAADHGQP 1654



 Score = 40.4 bits (93), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 50/160 (31%), Positives = 79/160 (49%), Gaps = 19/160 (11%)

Query: 77  VKYWLSND---YGERFSISRQ-GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVN 129
           V Y+L+     + + F I  Q G I+    +D ETE   + TV A D     +++SATV 
Sbjct: 499 VTYFLAETPETHAQWFQIDSQTGLITTRSHIDCETEPVPQLTVIARDGGQPALSSSATVL 558

Query: 130 ISVVNVNDWDPRFRYPQYELFLPHIPLADLTP-GSVIGKVEAADGDKG--DRVTLSLRGP 186
           +++ +VND +P F    Y     ++ +A+  P G  I KV A+D D G    V  +L   
Sbjct: 559 VTIHDVNDNEPIFDQSFY-----NVTIAENEPIGRCILKVSASDPDCGVNAMVNYTLGEG 613

Query: 187 YEKM--FSIND-SGHISIV-DLSALNTSTIQLVVVATDTG 222
           ++ +  F +   SG I I  +L     S+ +  V+ATD G
Sbjct: 614 FKHLTEFEVRSASGEICIAGELDYEQRSSYEFPVLATDRG 653



 Score = 38.5 bits (88), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 59/214 (27%), Positives = 82/214 (38%), Gaps = 47/214 (21%)

Query: 50   YSVSALENLPVNYVLLTVTT-------NKPRDLRVKYWLSNDYGERFSISRQ-GDISLMQ 101
            Y  + LEN P    +L VT        N      +   ++ND    F +  Q G I+   
Sbjct: 1682 YRATILENAPSGSFVLQVTAKPTHGSDNANLTYEIPVGVANDL---FHVDWQRGIITTRG 1738

Query: 102  CLDYETEDSYRFTVYATDTLMTTS--------------------------ATVNISVVNV 135
              D E +  YR  +Y TD    T+                          ATV I++ +V
Sbjct: 1739 QFDRELQSEYRLPIYVTDANRLTALASSSIRKQRSSTETSTTSNGQHFDVATVVITIGDV 1798

Query: 136  NDWDPRFRYPQ-YELFLPHIPLADLTPGSVIGKVEAADGDKG---DRVTLSLRGPYEKMF 191
            ND  P FR    Y L +P     + +  SVI  V A D D+G   D +   + G     F
Sbjct: 1799 NDHAPEFRPGSCYGLSVP-----ENSETSVIHTVVATDLDEGVNADILYSIIGGNLGNKF 1853

Query: 192  SIN-DSGHISIVDLSALNTSTIQLVVVATDTGNP 224
            SI+  +G +S   L     S   L V A+D G P
Sbjct: 1854 SIDARTGELSARSLDREQHSRYTLQVQASDRGKP 1887



 Score = 38.1 bits (87), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 40/144 (27%), Positives = 64/144 (44%), Gaps = 14/144 (9%)

Query: 95   GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFL 151
            G+I+  + LD E  + Y   V A D      +    V I V +VND  P    PQ ++  
Sbjct: 1174 GEITTKEPLDREQRELYDLLVEARDQGSPQRSARVPVRIHVTDVNDNAPEIADPQEDVVS 1233

Query: 152  PHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRG---PYEKMFSIN-DSGHISIVD- 203
                  +  PG+ + ++ A D D G   +++   ++G       +FSI+  +G I     
Sbjct: 1234 VR---EEQPPGTEVVRIRAIDRDSGQNASITYSIVKGRDSDGHGLFSIDPQTGVIRTRTV 1290

Query: 204  LSALNTSTIQLVVVATDTGNPPRQ 227
            L     S  +L V ATD G PP++
Sbjct: 1291 LDHEERSIYRLGVAATDGGQPPKE 1314


>gi|345324502|ref|XP_003430824.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 3-like
            [Ornithorhynchus anatinus]
          Length = 4517

 Score = 65.1 bits (157), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 64/197 (32%), Positives = 92/197 (46%), Gaps = 17/197 (8%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPR---DLRVKYWLSNDYGERFSISRQ-GDISLM 100
            FS + YS    EN     +L  V    P    + +V Y L++     FSI R  G I L 
Sbjct: 3127 FSSDHYSACVYENTATKALLTRVQATDPDVGVNRKVVYSLADSANGYFSIDRSSGIIILE 3186

Query: 101  QCLDYETEDSYRFTVYATDT----LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
            Q LD E + SY  +V A+D      +++ ATV I+V+++ND  P F    Y + +P    
Sbjct: 3187 QPLDREVQSSYNISVKASDQSVALALSSFATVTITVLDINDNPPVFERRDYLVTVPE--- 3243

Query: 157  ADLTPGSVIGKVEAADGDKGD--RVTLSLRGPYEK-MFSIND-SGHISIV-DLSALNTST 211
             D +PG+ +  V A   D G    +T  +R   E+  F IN  +G IS++ +L       
Sbjct: 3244 -DTSPGTQVLAVFATSKDIGTNAEITYLIRSGNERGKFRINSRTGEISVIEELDYELCKD 3302

Query: 212  IQLVVVATDTGNPPRQA 228
              LVV A D G P   A
Sbjct: 3303 FYLVVEAADGGTPALSA 3319



 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 71/230 (30%), Positives = 103/230 (44%), Gaps = 25/230 (10%)

Query: 27   ALATLIVSKAGTSLRELQFSKNEYSVSALEN-LPVNYVLLTVTTNKPRDLRVKYWLSNDY 85
            A  TL+V +A  S   L F+++ YS S  EN   +  V +        +  +KY L N  
Sbjct: 1962 ATVTLLVKEALDS--GLHFTQSFYSTSIAENSTNITKVAIVNAVGNRLNEPLKYSLLNP- 2018

Query: 86   GERFSI-SRQGDISLMQC-LDYETEDSYRFTVYAT---DTLMTTSATVNISVVNVNDWDP 140
            G +F I S  G I       D E ++ Y   V A+   D L      V ++V ++ND  P
Sbjct: 2019 GNKFKIKSTSGVIQTTGIPFDREEQEVYELVVEASRELDRLRVARVIVRVTVEDINDNTP 2078

Query: 141  RFRYPQYELFLPHIPLA--DLTPGSVIGKVEAADGDKGDR--VTLSLRGPYEKMFSINDS 196
             F      + LP+      D  PG+ I +V A D DKG    VT  LR  Y        S
Sbjct: 2079 VF------VGLPYYAAVQVDAEPGTSIYRVTAIDRDKGANGDVTYLLREGYGHFEIDPSS 2132

Query: 197  GHISIVDLSALNTSTIQ--LVVVATDTGNPPRQASVPAIMHFPEAIVQQA 244
            G +++ +    + S I+  +VV+A D G+P   +SV     FP  IV +A
Sbjct: 2133 GDVTLREAFDSDLSNIEYSVVVLARDGGSPSLSSSV----EFPITIVNKA 2178



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 38/103 (36%), Positives = 54/103 (52%), Gaps = 6/103 (5%)

Query: 22   NQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDL----RV 77
            +Q ++++ TL V     +     F  +  SV  LE+LPV  V+  + T+ P DL    +V
Sbjct: 909  SQQQFSVVTLRVFLDDVNDCPPAFIPSSSSVKVLEDLPVGTVIAWLETHDP-DLGLGGQV 967

Query: 78   KYWLSNDYGERFSISR-QGDISLMQCLDYETEDSYRFTVYATD 119
            +Y L NDY  RF I +  G I L + LDYE +  Y  TV A D
Sbjct: 968  RYSLVNDYNGRFEIDKASGAIRLNRELDYEKQQFYNLTVRAKD 1010



 Score = 48.9 bits (115), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 41/146 (28%), Positives = 69/146 (47%), Gaps = 17/146 (11%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKP---RDLRVKYWLSNDYG-----ERFSI-SRQG 95
            F  + Y    +E +P    L+ V    P    + +V Y L +D       + F I S  G
Sbjct: 2810 FDASSYDAIVMEGMPAGTKLIQVKAEDPDWGANGQVTYALYSDTDLPGVTQAFGIDSNSG 2869

Query: 96   DISLMQCLDYETEDSYRFTVYATD----TLMTTSATVNISVVNVNDWDPRFRYPQYELFL 151
             IS ++ LD+E +  + F V A+D      ++ +A+V ++V +VND  P F    +E++ 
Sbjct: 2870 WISTLRDLDHEADPMFTFAVVASDLGEAVSLSATASVAVTVTDVNDNAPAF---AHEVYR 2926

Query: 152  PHIPLADLTPGSVIGKVEAADGDKGD 177
             H+  +D  PG V+  +   D D  D
Sbjct: 2927 GHVKESD-PPGEVVAVLSTRDRDTSD 2951



 Score = 48.5 bits (114), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 64/214 (29%), Positives = 95/214 (44%), Gaps = 28/214 (13%)

Query: 53   SALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYG-ERFSISRQ-GDISLMQCLDYET 107
            S  EN  +   +L VT    +  RD  V+Y + +  G  RF+I  + G I     LD ET
Sbjct: 1047 SVKENSRIGTSVLQVTARDEDSGRDGEVQYSIRDGSGLGRFNIDEETGVIYTADVLDRET 1106

Query: 108  EDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSV 164
              SY  TVYA D     + ++  V I V +VND  P    P Y   +      D+   SV
Sbjct: 1107 TGSYWLTVYAADRGVVPLYSTIEVYIEVEDVNDNAPLTSEPIYYPMVMENSPKDV---SV 1163

Query: 165  IGKVEAADGDKGDRVTLSLR---GPYEKMFSIN-DSGHISIVD--LSALNTSTIQLVVVA 218
            I +++A D D G    L+ R   G  +  F++N  +G I+     L     +   L V  
Sbjct: 1164 I-QIQAQDPDSGSNEKLTYRITSGNPQNFFAMNFKTGVITTTSRKLDREQQAEHFLEVTV 1222

Query: 219  TDTGNPPRQASVPAIM----------HFPEAIVQ 242
            TD G+ P+Q++V  ++           FPE + Q
Sbjct: 1223 TDGGSSPKQSTVWVVVQVLDENDNKPQFPEKVYQ 1256



 Score = 48.1 bits (113), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 44/139 (31%), Positives = 64/139 (46%), Gaps = 12/139 (8%)

Query: 103  LDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPG 162
            LD E +D Y   + ATD L  T A V ++V +VND  P      Y   +P     D+   
Sbjct: 2986 LDREEQDVYSLNITATDGLFVTQAVVEVTVSDVNDNSPVCDQVAYTALIPE----DIPSN 3041

Query: 163  SVIGKVEAADGDKGDR--VTLSLRGPYEKMFSIN-DSGHISIVDLSALNTSTI---QLVV 216
             +I K+ A D D G    ++ SL G     F ++ +SG +    L+ L+   I    L+V
Sbjct: 3042 KLILKISAKDPDVGSNGDISYSLYGSGNNKFFLDPESGELKT--LALLDREKIPVYNLIV 3099

Query: 217  VATDTGNPPRQASVPAIMH 235
             ATD G    Q+ V  I+ 
Sbjct: 3100 RATDGGGRFCQSEVHLILE 3118



 Score = 45.1 bits (105), Expect = 0.059,   Method: Compositional matrix adjust.
 Identities = 54/198 (27%), Positives = 84/198 (42%), Gaps = 11/198 (5%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGERFSISRQGDISLMQCL 103
            +F+  +Y     EN+ V   ++ ++      L  +    N  G        G I+  + L
Sbjct: 1666 KFAHKDYQAEVNENVDVGTSVILISAISQSTLMYEVKDGNVDGAFVINPYSGVITNQRAL 1725

Query: 104  DYETEDSYRFTVYATDTL-MTTSATVNISVVNVNDWDPRFRYPQYELFLPH-IPLADLTP 161
            DYE   SY+  V AT+   M ++ATVNI VV+ ND  P F + QY   L    P+  +  
Sbjct: 1726 DYERTASYQLIVQATNMAGMASNATVNIQVVDENDNAPVFLFSQYSGSLSEAAPVNSVVR 1785

Query: 162  GSVIGK--VEAADGDKGDRVTLS---LRGPYEKMFSINDSGHISIVDLSALNTSTI---Q 213
             S      + A D D      L    +    +K F++ DS   +I  ++ L+  TI    
Sbjct: 1786 SSANSPLVIRATDADSNQNALLVYQIVEATAKKYFTV-DSSTGAIRTIAHLDHETIARFH 1844

Query: 214  LVVVATDTGNPPRQASVP 231
              V   D+G+P   A  P
Sbjct: 1845 FHVHVRDSGSPQLTAESP 1862



 Score = 44.7 bits (104), Expect = 0.074,   Method: Compositional matrix adjust.
 Identities = 44/179 (24%), Positives = 77/179 (43%), Gaps = 14/179 (7%)

Query: 13   LVVRAIQYDNQDRYALATL---IVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTT 69
            L ++A+      + + A L    + K   S   L F +  Y+ + +E+  V  ++  V+ 
Sbjct: 1323 LTIKAVDNGRPQKSSTARLHIEWIKKPPPSPTPLTFDEPFYNFTVMESDKVTEIVGVVSV 1382

Query: 70   NKPRDLRVKYW---LSNDYGERFSISRQ-GDISLMQCLDYETEDSYRFTVYATDTLMTTS 125
              P    +  W   +  +    F   +  G I + + LD E    Y  TV  TD      
Sbjct: 1383 QPPN---IPLWFDVIGGNSDSSFDTEKGVGTIVIAKPLDAEQRSIYNMTVEVTDGTNVAV 1439

Query: 126  ATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR 184
              V I V++ ND  P F +P Y++ +      D+ P + I +VEA D D+  +++ SL 
Sbjct: 1440 TQVFIKVLDNNDNGPEFSHPSYDVTISE----DVPPDTEILQVEATDRDEKHKLSYSLH 1494



 Score = 42.7 bits (99), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 57/202 (28%), Positives = 94/202 (46%), Gaps = 25/202 (12%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWL-SNDYGERFSIS-RQGDISLMQC 102
            F +  Y+ S  E++ ++  +L +    P    + Y +   D   +F++    G +S++  
Sbjct: 2182 FDRPFYTASVSEDVEMHTPVLGINATSPEGQGIIYIVVDGDPYNQFNVDFDTGVLSVVSP 2241

Query: 103  LDYETEDSYRFTVYATDTLMTTSA--TVNISVVNVNDWDPRFRYPQYELFLPHIPLADLT 160
            LDYET  +++ TV A+D L    A  TV++ V +VND  P F  P Y         A L+
Sbjct: 2242 LDYETASAFKLTVRASDALSGARAEVTVDVLVTDVNDNAPVFDQPSYS--------ATLS 2293

Query: 161  PGSVIG----KVEAADGDKGDRVTLSLRGPYEKMFSINDSGHIS-----IVDLSALNTST 211
              S+IG    +V A+D D      +  +   +  F+  D  HI      I+    L+  +
Sbjct: 2294 EASLIGTPVLQVVASDADSESNRLVQYQ-IVQDTFNSTDYFHIDSSSGLILTARLLDHES 2352

Query: 212  IQ---LVVVATDTGNPPRQASV 230
            +Q   L V ATD+G PP  + V
Sbjct: 2353 VQRSTLKVRATDSGFPPLSSEV 2374



 Score = 42.4 bits (98), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 34/111 (30%), Positives = 56/111 (50%), Gaps = 8/111 (7%)

Query: 45   FSKNEYSVSALENL-PVNYVLLTVTTNKP--RDLRVKYWL--SNDYGERFSISRQGDISL 99
            F + +Y V+  E+  P   VL    T+K    +  + Y +   N+ G+    SR G+IS+
Sbjct: 3232 FERRDYLVTVPEDTSPGTQVLAVFATSKDIGTNAEITYLIRSGNERGKFRINSRTGEISV 3291

Query: 100  MQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQY 147
            ++ LDYE    +   V A D     ++  ATVN+++ +VND  P+F    Y
Sbjct: 3292 IEELDYELCKDFYLVVEAADGGTPALSAVATVNVNLTDVNDNAPQFNQEVY 3342



 Score = 40.8 bits (94), Expect = 0.98,   Method: Compositional matrix adjust.
 Identities = 59/235 (25%), Positives = 104/235 (44%), Gaps = 17/235 (7%)

Query: 2   INEDDFLQPITLVVRAIQYDNQDRYALATLI-VSKAGTSLRELQFSKNEYSVSALENLPV 60
           I+ ++F     L ++A    +  +++   L+ ++     +  ++F K+ Y V+  E  P 
Sbjct: 328 IDWENFPYGYNLTLQAKDRGSPQKFSAVKLVHIANPKRDVVPVKFEKDAYDVTISEFSPP 387

Query: 61  NYVLLTVT-TNKPRDLRVKYWLSNDYGERFSIS-RQGDISLMQCLDYETEDSYRFTVYAT 118
              +  V    +P     K   S D  E F I  R G I   + L+   ++ Y   V + 
Sbjct: 388 GVAVAVVKLIPEPPGAEYKMTPSED-AEYFKIDPRSGLIVTARPLNVLEKEVYELGVTSQ 446

Query: 119 DTLMTTSATVNISVVNVNDWDPRFRYPQYELFL-PHIPLADLTPGSVIGKVEAADGDKGD 177
           +  +    TV++   + ND  P F  P YE F+   +P+     G+ I  V A+D DKG+
Sbjct: 447 EGDLKAQVTVHLE--DANDHIPEFGEPSYEAFVNESVPV-----GTSIVAVSASDRDKGE 499

Query: 178 R--VTLSLRGPYEKMFSIND-SGHISIVDLSALNTS--TIQLVVVATDTGNPPRQ 227
              +T S+       FSIN  +G IS  +     ++  + +  V A+D G+P R 
Sbjct: 500 NGYITYSIASLNVLPFSINQFTGVISTSEELDFESAPESYRFFVRASDWGSPYRH 554



 Score = 39.7 bits (91), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 40/147 (27%), Positives = 63/147 (42%), Gaps = 13/147 (8%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTV-TTNKPRDLRVKYWLSNDYG----ERFSIS-RQGDI 97
            +FS   Y V+  E++P +  +L V  T++    ++ Y L +        +F I    G +
Sbjct: 1455 EFSHPSYDVTISEDVPPDTEILQVEATDRDEKHKLSYSLHSSIDSVSMRKFRIDPGTGVL 1514

Query: 98   SLMQCLDYETEDSYRFTVYATDTLMTTS---ATVNISVVNVNDWDPRFRYPQYELFLPHI 154
               + LD+E +D +   V   D         A V +SV + ND  P F  P YE  +   
Sbjct: 1515 YTAERLDHEAQDKHILNVMVRDQEFPYRRNLARVIVSVEDANDHSPYFTSPLYEASM--- 1571

Query: 155  PLADLTPGSVIGKVEAADGDKGDRVTL 181
                   GS + +V A D DKG+   L
Sbjct: 1572 -FESAALGSAVLQVTALDKDKGENAEL 1597



 Score = 39.7 bits (91), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 40/74 (54%), Gaps = 5/74 (6%)

Query: 148  ELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSGHIS-IVDLSA 206
            E+F+  + L D  PG VIGK+ A D D  D ++ +LR   + +F +N  GH   +V L  
Sbjct: 3522 EIFI--VTLEDDFPGGVIGKIHATDQDVYDVLSFALRAEQKSLFQVN--GHDGKVVALGG 3577

Query: 207  LNTSTIQLVVVATD 220
            L++    L V  +D
Sbjct: 3578 LDSGKYVLNVSVSD 3591


>gi|300793712|ref|NP_001179860.1| cadherin EGF LAG seven-pass G-type receptor 2 precursor [Bos
           taurus]
          Length = 2920

 Score = 65.1 bits (157), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 68/219 (31%), Positives = 101/219 (46%), Gaps = 22/219 (10%)

Query: 25  RYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWL 81
           R ALATL +    T+  +  F + EY  S  ENL V Y +LTV     + P +  + Y L
Sbjct: 266 RSALATLTILVTDTNDHDPVFEQQEYKESLRENLEVGYEVLTVRATDGDAPPNANILYRL 325

Query: 82  SNDYG----ERFSIS-RQGDISLMQCLDYETEDSYRFTVYATDT-----LMTTSATVNIS 131
             + G    E F I  R G I     +D E  +SY+ TV A+D        T +A + +S
Sbjct: 326 LEESGGSPSEVFEIDPRSGVIRTRGPVDREEVESYQLTVEASDQGRDPGPRTATAAIFLS 385

Query: 132 VVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYE 188
           V + ND  P+F   +Y + +      D+ PG+ + +V A+D DKG    +    + G   
Sbjct: 386 VEDDNDNAPQFSEKRYVVQV----REDVAPGAPVLRVTASDRDKGSNALVHYSIMSGNAR 441

Query: 189 KMFSIN-DSGHISIVD-LSALNTSTIQLVVVATDTGNPP 225
             F ++  +G + +V  L    T    L V A D G PP
Sbjct: 442 GQFYLDAQTGALDVVSPLDYETTKEYTLRVRAQDGGRPP 480



 Score = 52.0 bits (123), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 49/171 (28%), Positives = 80/171 (46%), Gaps = 15/171 (8%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGERFSIS---RQGDIS 98
           F    +  + LE++P+ Y++L V     +   + R++Y L+   G  F  +     G IS
Sbjct: 502 FVSTPFQATVLESVPLGYLVLHVQAIDADAGDNARLEYRLAG-VGHDFPFTINNGTGWIS 560

Query: 99  LMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIP 155
           +   LD E  D Y F V A D     +T SA+V++++++VND +P F  P+Y + L    
Sbjct: 561 VAAELDREEVDFYSFGVEARDHGTPALTASASVSVTILDVNDNNPTFTQPEYTVRLNE-- 618

Query: 156 LADLTPGSVIGKVEAADGDKGDRVTLSL-RGPYEKMFSINDSGHISIVDLS 205
             D   G+ +  V A D D    +T  +  G     FSI       +V L+
Sbjct: 619 --DAAVGTSVVTVSAVDRDAHSVITYQITSGNTRNRFSITSQSGGGLVSLA 667



 Score = 45.4 bits (106), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 51/189 (26%), Positives = 86/189 (45%), Gaps = 14/189 (7%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRDLR--VKYWL-SNDYGERFSISRQ---GDIS 98
           F++ EY+V   E+  V   ++TV+    RD    + Y + S +   RFSI+ Q   G +S
Sbjct: 607 FTQPEYTVRLNEDAAVGTSVVTVSAVD-RDAHSVITYQITSGNTRNRFSITSQSGGGLVS 665

Query: 99  LMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLAD 158
           L   LDY+ E  Y   V A+D     +A V ++V + N   P F+   Y + +      D
Sbjct: 666 LALPLDYKLERQYVLAVTASDGTRQDTAQVVVNVTDANTHRPVFQSSHYTVNINE----D 721

Query: 159 LTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSINDSGHISI-VDLSALNTSTIQLV 215
              G+ +  + A D D G+  R+T  +     +     D+G ++   +L   +  +  L 
Sbjct: 722 RPAGTTVVLISATDEDTGENARITYFMEDSIPQFRIDADTGAVTTQAELDYEDQVSYTLA 781

Query: 216 VVATDTGNP 224
           + A D G P
Sbjct: 782 ITARDNGIP 790



 Score = 44.7 bits (104), Expect = 0.088,   Method: Compositional matrix adjust.
 Identities = 40/149 (26%), Positives = 69/149 (46%), Gaps = 10/149 (6%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWL-SNDYGERFSIS-RQGDISL 99
            F ++E+ V   EN P+   +  VT   P +    ++ Y +   +  E F +    G+++ 
Sbjct: 918  FEQDEFDVFVEENSPIGLAVARVTATDPDEGTNAQIMYQIVEGNIPEVFQLDIFSGELTA 977

Query: 100  MQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPH--IPLA 157
            +  LDYE    Y   + AT   + + ATV++ +++ ND  P      +E+   +     +
Sbjct: 978  LVDLDYEDRPEYVLVIQATSAPLVSRATVHVRLLDRNDNPPVLG--NFEILFNNYVTNRS 1035

Query: 158  DLTPGSVIGKVEAADGDKGDRVTLSL-RG 185
               PG  IG+V A D D  D +T S  RG
Sbjct: 1036 SSFPGGAIGRVPAHDPDISDSLTYSFERG 1064


>gi|355782853|gb|EHH64774.1| hypothetical protein EGM_18085 [Macaca fascicularis]
          Length = 3359

 Score = 65.1 bits (157), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 60/195 (30%), Positives = 91/195 (46%), Gaps = 20/195 (10%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWLSNDYGERFSIS-RQGDISLM 100
            F +  Y  +  E++PV  V+LTVT           ++Y L +  G +F+I+   GDI ++
Sbjct: 2407 FDQPSYQEAVFEDVPVGTVILTVTATDADSGNFALIEYSLGDGEG-KFAINPTTGDIYVL 2465

Query: 101  QCLDYETEDSYRFTVYATD-------TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
              LD E +D Y  T  A D            S  V I V++VND  P+F  PQ+   +  
Sbjct: 2466 SSLDREKKDHYILTALAKDNPGDVASNRRENSVQVVIQVLDVNDCRPQFSKPQFSTSV-- 2523

Query: 154  IPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIN-DSGHISIVDLSALNTS 210
                +   G+ +  + A D D+G    +T SL GP  + F ++ DSG ++       +  
Sbjct: 2524 --YENEPAGTSVITMMATDQDEGPNGELTYSLEGPGVEAFHVDMDSGLVT-TRRPLQSYE 2580

Query: 211  TIQLVVVATDTGNPP 225
               L VVATD G PP
Sbjct: 2581 RFNLTVVATDGGEPP 2595



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 63/210 (30%), Positives = 99/210 (47%), Gaps = 28/210 (13%)

Query: 45  FSKNEYSVSALENLPVNYVLLTV--TTNKPRDL-RVKYWLSNDYGERFSISRQ-GDISLM 100
           FS+  Y++S  EN+ V   +LTV  T N       V Y+ S+D  +RFS+ +  G I L+
Sbjct: 465 FSQPLYNISLYENVTVGTSVLTVLATDNDAGTFGEVNYFFSDD-PDRFSLDKDTGLIMLI 523

Query: 101 QCLDYETEDSYRFTVYATDTL-MTTSATVNISVVNVNDWDPRFRYPQYELFL----PHIP 155
             LDYE    +  T+ A D     T+  V I+V++VND  P F+   Y   L    P + 
Sbjct: 524 ARLDYELIQRFTLTIIARDGGGEETTGRVRINVLDVNDNVPTFQKDAYVGALRENEPSV- 582

Query: 156 LADLTPGSVIGKVEAADGDK--GDRVTLSL-----RGPYEKMFSINDSGHISI---VDLS 205
                  + + ++ A D D    +++T S+      G Y  +      G IS+   +D  
Sbjct: 583 -------TQLVRLRATDEDSPPNNQITYSIVSASAFGSYFDISLYEGYGVISVSRPLDYE 635

Query: 206 ALNTSTIQLVVVATDTGNPPRQASVPAIMH 235
            ++   I L V+A D GNPP  ++VP  + 
Sbjct: 636 QISNGLIYLTVMAKDAGNPPLNSTVPVTIE 665



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 68/218 (31%), Positives = 102/218 (46%), Gaps = 44/218 (20%)

Query: 45  FSKNEYSVSALENLPVNY-VLLTVTTNKPRDLRVKYWLSNDYGE-----------RFSI- 91
           FSK  Y VS +EN+     VL    T+  R        S +YG+           +F I 
Sbjct: 676 FSKPAYFVSVVENIMAGATVLFLNATDLDR--------SREYGQESIIYSLEGSAQFRIN 727

Query: 92  SRQGDISLMQCLDYETEDSYRFTVYATD-----TLMTTSATVNISVVNVNDWDPRFRYPQ 146
           +R G+I+    LD ET+  Y   V A D        T  ATVNI+++++ND  P ++   
Sbjct: 728 ARSGEITTTSLLDRETKSEYILIVRAVDGGVGHNQKTGIATVNITLLDINDNHPTWKDAP 787

Query: 147 YELFLPHIPLADLT-PGSVIGKVEAADGDKGDRVTL--SLRGPYEKMFSIND-SGHI--- 199
           Y     +I L ++T P S +  V A D D G+  TL  S++ P  K +S+N  +G I   
Sbjct: 788 Y-----YINLVEMTPPDSDVTTVVAVDPDLGENGTLVYSIQPP-NKFYSLNGTTGKIRTT 841

Query: 200 -SIVDLSALNTSTIQL----VVVATDTGNPPRQASVPA 232
            +++D    +    +L    VV  TD G PP +A+  A
Sbjct: 842 HAMLDRENPDPHEAELMRKIVVSVTDCGRPPLRATSSA 879



 Score = 46.6 bits (109), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 61/205 (29%), Positives = 90/205 (43%), Gaps = 27/205 (13%)

Query: 43   LQFSKNEYSVSALENLPVNYVLLTVTTNKPRDL-----RVKYWLSNDYGERFSISR-QGD 96
            +QFS   Y V  LENL     ++ V      +L     R   + S      F I    G 
Sbjct: 1316 VQFSNASYEVVILENLAPGTEIVRVQAYSIDNLNQIVYRFDAYTSTQAKALFKIDAITGV 1375

Query: 97   ISLMQCLDYETEDSYRFTVYATDTLMTTSATVN--ISVVNVNDWDPRFRY-PQYELFLPH 153
            I++   +D E  D Y  TV A D      +TV   I+V++ ND  PRF +     + +P 
Sbjct: 1376 ITVQGLVDREKGDFYTLTVVADDGGPKVDSTVQVYITVLDENDNSPRFDFISDSAISIPE 1435

Query: 154  IPLADLTPGSVIGKVEAADGDKGD--RVTLSLR-----GPYEKMFSINDS-GHISI---V 202
                D   G  +  V+A D D G   +V  SL      G +E + + NDS G + +   +
Sbjct: 1436 ----DCPVGQRVATVKARDPDAGSNGQVVFSLASGNIAGAFE-IVTTNDSIGEVFVARPL 1490

Query: 203  DLSALNTSTIQLVVVATDTGNPPRQ 227
            D   L+   ++  VVA+D G PPR+
Sbjct: 1491 DREELDHYILK--VVASDRGTPPRK 1513



 Score = 45.1 bits (105), Expect = 0.063,   Method: Compositional matrix adjust.
 Identities = 59/207 (28%), Positives = 91/207 (43%), Gaps = 17/207 (8%)

Query: 27  ALATLIVSKAGTSLRELQFSKNEYSVSAL---ENLPVNYVLLTVTTNKPRDLR---VKYW 80
           A   +++S     +  L F  N +  + L   E+ PV     +VT    RD+    + + 
Sbjct: 12  AWLLVLISGCWGQVNRLPFFTNHFFDTYLLISEDTPVGS---SVTQLLARDMDNDPLVFG 68

Query: 81  LSNDYGERFSISR--QGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDW 138
           +S +   RF       G + L Q LD ET+  +      +D     +  VNI V +VND 
Sbjct: 69  VSGEEASRFFAVEPDTGVVWLRQPLDRETKSEFTVEFSVSDHQGVITRKVNIQVGDVNDN 128

Query: 139 DPRFRYPQYELFLPHIPLADLTP-GSVIGKVEAADGD--KGDRVTLSLRGPYEKMFSIND 195
            P F    Y + +P +     TP G+ I  V A D D   G  V  S + P  + F+I+ 
Sbjct: 129 APTFHNQPYSVRIPEVGATRNTPVGTPIFIVNATDPDLGAGGSVLYSFQPP-SQFFAIDS 187

Query: 196 S-GHISIV-DLSALNTSTIQLVVVATD 220
           + G I+++ +L    T   QL V ATD
Sbjct: 188 ARGIITVIRELDYETTQAYQLTVNATD 214



 Score = 44.7 bits (104), Expect = 0.075,   Method: Compositional matrix adjust.
 Identities = 62/235 (26%), Positives = 106/235 (45%), Gaps = 45/235 (19%)

Query: 65   LTVTTNKPRDLRVKYWLS---NDYG---------------ERFSIS-RQGDISLMQCLDY 105
            ++V+ + PR+ RV  WL+   ND G                +FS+  R   +  +  LD 
Sbjct: 1007 VSVSEDVPREFRV-VWLNCTDNDVGLNAELSYFITGGNVDGKFSVGYRDAVVRTVVSLDR 1065

Query: 106  ETEDSYRFTVYATDT-----LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLT 160
            ET  +Y   + A D        T +ATV ++V++VND  P F    YE  +P     D+ 
Sbjct: 1066 ETTAAYMLILEAIDNGPVGKRHTGTATVFVTVLDVNDNRPIFLQSSYEASVPE----DIP 1121

Query: 161  PGSVIGKVEAADGDKGD--RVTLS-LRGPYEKMFSINDSGHISIVDLSALN---TSTIQL 214
             G  I +++A D D+G+  RV    L G +   F I+ S  + +     L+    S+  L
Sbjct: 1122 EGHSIVQLKATDADEGEFGRVWYRILHGNHGNNFRIHVSNGLLMRGPRPLDRERNSSHVL 1181

Query: 215  VVVATDTGNPPRQASVPAIMHFPE------AIVQQASSKLN----SGTSSTVLII 259
            +V A +    P ++SV  I++  +         QQ  S+L     +G  ++V+++
Sbjct: 1182 IVEAYNHDLGPMRSSVRVIVYVEDVNDEAPVFTQQQYSRLGLRETAGIGTSVIVV 1236



 Score = 44.3 bits (103), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 41/146 (28%), Positives = 68/146 (46%), Gaps = 17/146 (11%)

Query: 44  QFSKNEYSVSALENLPVNYVL----LTVTTNKPRDLRVKYWLSNDYGERF-----SISRQ 94
           +F+ +EYSV+  E   V + L      V  ++  +   + +L  +    F     S+  +
Sbjct: 354 EFNSSEYSVAITELAQVGFALPLFIQVVDKDEGLNSMFEVYLVGNNSHHFIISPTSVQGK 413

Query: 95  GDISLMQC--LDYETEDSYRFTVYATDTL--MTTSATVNISVVNVNDWDPRFRYPQYELF 150
            DI +     LDYET D Y F ++A +++      A V I+++N ND  P F  P Y + 
Sbjct: 414 ADIRIRVAIPLDYETVDRYDFDLFANESVPDHVGYAKVKITLINENDNRPIFSQPLYNIS 473

Query: 151 LPHIPLADLTPGSVIGKVEAADGDKG 176
           L      ++T G+ +  V A D D G
Sbjct: 474 L----YENVTVGTSVLTVLATDNDAG 495



 Score = 39.7 bits (91), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 33/107 (30%), Positives = 49/107 (45%), Gaps = 8/107 (7%)

Query: 92   SRQGDISLMQCLDYETEDSYRFTVYATDTLMTTSAT---VNISVVNVNDWDPRFRYPQYE 148
            S  G +   + +DYE      FTV A+D      A    V + +V++ND +P F  P Y+
Sbjct: 2354 SSAGKVIANRTVDYEEVHWLNFTVRASDNGSPPRAAEIPVYLEIVDINDNNPIFDQPSYQ 2413

Query: 149  LFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSIN 194
              +      D+  G+VI  V A D D G+   +    G  E  F+IN
Sbjct: 2414 EAV----FEDVPVGTVILTVTATDADSGNFALIEYSLGDGEGKFAIN 2456



 Score = 39.7 bits (91), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 67/280 (23%), Positives = 114/280 (40%), Gaps = 56/280 (20%)

Query: 7    FLQPITLVVRA----IQYDNQDRYALATLIVSKAGTS-----------LRELQFSKNEY- 50
            F+ P+T V+R     I  + Q+ Y L T++ +  GT            + ++  S  E+ 
Sbjct: 2122 FIHPVTGVIRVGNATIDREEQESYRL-TVVATDWGTVPLSGTAIITILIEDINDSCPEFL 2180

Query: 51   ----SVSALENLPVNYVLLTVTTNKPRDLRVKY--------------WLSNDYGERFSIS 92
                +VS LE+     V+  VT    RDL  K                L  D  + F+++
Sbjct: 2181 NPIQTVSVLESAEPGTVIANVTAID-RDLNPKLEYHIVGIVAKDDTDLLVPDQEDVFAVN 2239

Query: 93   -RQGDISLMQCLDYETEDSYRFTVYATD--------TLMTTSATVNISVVNVNDWDPRFR 143
               G + +   L+ E   +Y  T+   D        ++   +A + ++V++VND  P+F+
Sbjct: 2240 INTGSVMVKSPLNRELVATYEVTLSVIDNASDLPERSVSVPNAKLTVNVLDVNDNTPQFK 2299

Query: 144  YPQYELFLPHIPLADLTPGSVIGKVEAADGDKG-----DRVTLSLRGPYEKMFSINDSGH 198
                  +   I L   TPG+ +  V A D DKG         L L  P       + +G 
Sbjct: 2300 PFGITYYTERI-LEGATPGTTLIAVAAVDPDKGLNGLVTYTLLDLVPPGYVQLEDSSAGK 2358

Query: 199  I---SIVDLSALNTSTIQLVVVATDTGNPPRQASVPAIMH 235
            +     VD   ++   +   V A+D G+PPR A +P  + 
Sbjct: 2359 VIANRTVDYEEVHW--LNFTVRASDNGSPPRAAEIPVYLE 2396



 Score = 39.3 bits (90), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 44/142 (30%), Positives = 67/142 (47%), Gaps = 16/142 (11%)

Query: 105 YETEDSYRFTVYATDT-----LMTTSATVNISVVNVNDWDPRFR-YPQYELFLPHIPLAD 158
           +E E   +  V  TD        T+SATV ++++++ND DP F+  P     L  IP   
Sbjct: 853 HEAELMRKIVVSVTDCGRPPLRATSSATVFVNLLDLNDNDPTFQNLPFVAEVLEGIP--- 909

Query: 159 LTPGSVIGKVEAADGDKGDRVTLSLRGP--YEKM-FSINDSGH--ISIVDLSALNTSTIQ 213
              G  I +V A D D+G    +S R P    +M F IN S    ++  +L     +  Q
Sbjct: 910 --AGVSIYQVVAIDLDEGLNGLVSYRMPVGMPRMDFLINSSSGMVVTTTELDRERIAEYQ 967

Query: 214 LVVVATDTGNPPRQASVPAIMH 235
           L VVA+D G P + ++    +H
Sbjct: 968 LRVVASDAGTPTKSSTSTLTIH 989


>gi|296489410|tpg|DAA31523.1| TPA: cadherin, EGF LAG seven-pass G-type receptor 2 [Bos taurus]
          Length = 2920

 Score = 65.1 bits (157), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 68/219 (31%), Positives = 101/219 (46%), Gaps = 22/219 (10%)

Query: 25  RYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWL 81
           R ALATL +    T+  +  F + EY  S  ENL V Y +LTV     + P +  + Y L
Sbjct: 266 RSALATLTILVTDTNDHDPVFEQQEYKESLRENLEVGYEVLTVRATDGDAPPNANILYRL 325

Query: 82  SNDYG----ERFSIS-RQGDISLMQCLDYETEDSYRFTVYATDT-----LMTTSATVNIS 131
             + G    E F I  R G I     +D E  +SY+ TV A+D        T +A + +S
Sbjct: 326 LEESGGSPSEVFEIDPRSGVIRTRGPVDREEVESYQLTVEASDQGRDPGPRTATAAIFLS 385

Query: 132 VVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYE 188
           V + ND  P+F   +Y + +      D+ PG+ + +V A+D DKG    +    + G   
Sbjct: 386 VEDDNDNAPQFSEKRYVVQV----REDVAPGAPVLRVTASDRDKGSNALVHYSIMSGNAR 441

Query: 189 KMFSIN-DSGHISIVD-LSALNTSTIQLVVVATDTGNPP 225
             F ++  +G + +V  L    T    L V A D G PP
Sbjct: 442 GQFYLDAQTGALDVVSPLDYETTKEYTLRVRAQDGGRPP 480



 Score = 52.0 bits (123), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 49/171 (28%), Positives = 80/171 (46%), Gaps = 15/171 (8%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGERFSIS---RQGDIS 98
           F    +  + LE++P+ Y++L V     +   + R++Y L+   G  F  +     G IS
Sbjct: 502 FVSTPFQATVLESVPLGYLVLHVQAIDADAGDNARLEYRLAG-VGHDFPFTINNGTGWIS 560

Query: 99  LMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIP 155
           +   LD E  D Y F V A D     +T SA+V++++++VND +P F  P+Y + L    
Sbjct: 561 VAAELDREEVDFYSFGVEARDHGTPALTASASVSVTILDVNDNNPTFTQPEYTVRLNE-- 618

Query: 156 LADLTPGSVIGKVEAADGDKGDRVTLSL-RGPYEKMFSINDSGHISIVDLS 205
             D   G+ +  V A D D    +T  +  G     FSI       +V L+
Sbjct: 619 --DAAVGTSVVTVSAVDRDAHSVITYQITSGNTRNRFSITSQSGGGLVSLA 667



 Score = 45.4 bits (106), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 51/189 (26%), Positives = 86/189 (45%), Gaps = 14/189 (7%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRDLR--VKYWL-SNDYGERFSISRQ---GDIS 98
           F++ EY+V   E+  V   ++TV+    RD    + Y + S +   RFSI+ Q   G +S
Sbjct: 607 FTQPEYTVRLNEDAAVGTSVVTVSAVD-RDAHSVITYQITSGNTRNRFSITSQSGGGLVS 665

Query: 99  LMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLAD 158
           L   LDY+ E  Y   V A+D     +A V ++V + N   P F+   Y + +      D
Sbjct: 666 LALPLDYKLERQYVLAVTASDGTRQDTAQVVVNVTDANTHRPVFQSSHYTVNINE----D 721

Query: 159 LTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSINDSGHISI-VDLSALNTSTIQLV 215
              G+ +  + A D D G+  R+T  +     +     D+G ++   +L   +  +  L 
Sbjct: 722 RPAGTTVVLISATDEDTGENARITYFMEDSIPQFRIDADTGAVTTQAELDYEDQVSYTLA 781

Query: 216 VVATDTGNP 224
           + A D G P
Sbjct: 782 ITARDNGIP 790



 Score = 42.0 bits (97), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 39/149 (26%), Positives = 68/149 (45%), Gaps = 10/149 (6%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWL-SNDYGERFSIS-RQGDISL 99
            F ++E+ V   EN P+   +  VT   P +    ++ Y +   +  E F +    G+++ 
Sbjct: 918  FEQDEFDVFVEENSPIGLAVARVTATDPDEGTNAQIMYQIVEGNIPEVFQLDIFSGELTA 977

Query: 100  MQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPH--IPLA 157
            +  LDY     Y   + AT   + + ATV++ +++ ND  P      +E+   +     +
Sbjct: 978  LVDLDYXDRPEYVLVIQATSAPLVSRATVHVRLLDRNDNPPVLG--NFEILFNNYVTNRS 1035

Query: 158  DLTPGSVIGKVEAADGDKGDRVTLSL-RG 185
               PG  IG+V A D D  D +T S  RG
Sbjct: 1036 SSFPGGAIGRVPAHDPDISDSLTYSFERG 1064


>gi|347543899|gb|AEP02522.1| CDH23, partial [Miniopterus schreibersii]
          Length = 3274

 Score = 65.1 bits (157), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 61/195 (31%), Positives = 90/195 (46%), Gaps = 20/195 (10%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDLR---VKYWLSNDYGERFSIS-RQGDISLM 100
            F +  Y  +  E+ PV  V+LTVT           ++Y L +  G +F+I+   GDI ++
Sbjct: 2392 FDEPSYQEAVFEDAPVGTVILTVTATDADSGNFAVIEYGLVDGEG-KFAINPTTGDIYVL 2450

Query: 101  QCLDYETEDSYRFTVYATD-------TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
              LD E +D Y  T  A D            S  V I V++VND  P+F   QY   +  
Sbjct: 2451 SSLDREKKDHYILTALAKDNPGDIASNRRENSVQVVIQVLDVNDCRPQFSKSQYSTSV-- 2508

Query: 154  IPLADLTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSIN-DSGHISIVDLSALNTS 210
                +   G+ +  + A D D+G    +T SL GP E+ F ++ DSG ++       +  
Sbjct: 2509 --YENEPAGTSVITMMATDQDEGSNGELTYSLEGPGEEAFHVDLDSGLVT-TKRPLHSYE 2565

Query: 211  TIQLVVVATDTGNPP 225
               L VVATD G PP
Sbjct: 2566 RFNLTVVATDGGEPP 2580



 Score = 51.6 bits (122), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 64/210 (30%), Positives = 97/210 (46%), Gaps = 28/210 (13%)

Query: 45  FSKNEYSVSALENLPVNYVLLTV--TTNKPRDL-RVKYWLSNDYGERFSISRQ-GDISLM 100
           FS+  Y+VS  EN+ V   +LTV  T N       V Y+ S+D  +RFS+ +  G I L+
Sbjct: 450 FSQPLYNVSLYENVTVGTSVLTVLATDNDVGTFGEVNYFFSDD-PDRFSLDKDTGLIMLI 508

Query: 101 QCLDYETEDSYRFTVYATDTL-MTTSATVNISVVNVNDWDPRFRYPQYELFL----PHIP 155
             LDYE    +  TV A D     T+  V I+V++VND  P F+   Y   L    P + 
Sbjct: 509 AKLDYELIQRFTLTVIARDGGGEETTGRVRINVLDVNDNVPTFQKDAYVGALRENEPSV- 567

Query: 156 LADLTPGSVIGKVEAADGDK--GDRVTLSL-----RGPYEKMFSINDSGHISI---VDLS 205
                  + + ++ A D D    +++T S+      G Y  +        IS+   +D  
Sbjct: 568 -------TQLVRLRATDEDSPPNNQITYSIVNASCFGSYFDISVYEGYAVISVSRPLDYE 620

Query: 206 ALNTSTIQLVVVATDTGNPPRQASVPAIMH 235
            +    I L V+A D GNPP  ++VP  + 
Sbjct: 621 QIPNGLIYLTVMAKDAGNPPLNSTVPVTIE 650



 Score = 51.2 bits (121), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 67/217 (30%), Positives = 101/217 (46%), Gaps = 42/217 (19%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGE-----------RFSI-S 92
           FSK  Y VS +E++     +L +      DL      S +YG+           +F I +
Sbjct: 661 FSKPAYFVSVVESIMAGATVLFLNAT---DLD----QSREYGQESIIYSLEGSSQFRIGA 713

Query: 93  RQGDISLMQCLDYETEDSYRFTVYATD-----TLMTTSATVNISVVNVNDWDPRFRYPQY 147
           R G+I+    LD ET+  Y   V A D        T  ATVNI+++++ND  P ++   Y
Sbjct: 714 RSGEITTTSLLDRETKSEYILIVRAVDGGVGHNQKTGIATVNITLLDINDNHPTWKDAPY 773

Query: 148 ELFLPHIPLADLT-PGSVIGKVEAADGDKGDRVTL--SLRGPYEKMFSINDS-GHIS--- 200
                +I L ++T P S +  V A D D G+  TL  S++ P  K +SIN S G I    
Sbjct: 774 -----YINLVEMTPPDSDVTTVVAVDPDLGENGTLVYSIQPP-NKFYSINSSTGKIRTTH 827

Query: 201 -IVDLSALNTSTIQL----VVVATDTGNPPRQASVPA 232
            ++D    +    +L    +V  TD G PP +A+  A
Sbjct: 828 VMLDRENPDPHEAELMRKIIVSVTDCGRPPLRATSSA 864



 Score = 48.5 bits (114), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 45/141 (31%), Positives = 66/141 (46%), Gaps = 15/141 (10%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDY---GERFSI-SRQGDISLM 100
           F    YSV   E+ PV   +  V    P DL     +   +    + F+I S +G ++++
Sbjct: 124 FHNQPYSVRIPEDTPVGTPIFIVNATDP-DLGAGGSVLYSFQPPSQFFAIDSARGIVTVI 182

Query: 101 QCLDYETEDSYRFTVYATDT----LMTTSATVNISVVNVNDWDPRF-RYPQYELFLPHIP 155
           Q LDYET  +Y+ TV ATD      ++T A + I + +V D DP F   P       H P
Sbjct: 183 QELDYETTQAYQLTVNATDQDKTRPLSTLANLAIIITDVQDMDPIFINLPYSTNIYEHSP 242

Query: 156 LADLTPGSVIGKVEAADGDKG 176
                PG+ +  + A D DKG
Sbjct: 243 -----PGTTVRVITAIDQDKG 258



 Score = 45.8 bits (107), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 58/206 (28%), Positives = 92/206 (44%), Gaps = 25/206 (12%)

Query: 41   RELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDL-----RVKYWLSNDYGERFSI-SRQ 94
             ++QFS   Y  + +ENL +   ++ V      ++     R   + S      F I +  
Sbjct: 1299 EDVQFSNASYEAAIMENLALGTEIVRVQAYSIDNINQITYRFDAYTSAQAKALFKIDAYT 1358

Query: 95   GDISLMQCLDYETEDSYRFTVYATDTLMTTSATVN--ISVVNVNDWDPRFRYPQYELFLP 152
            G I++   +D E  D Y  TV A D      +TV   I+V++ ND  PRF +        
Sbjct: 1359 GVITVKGLVDREKGDFYTLTVIADDGGPKVDSTVKVYITVLDENDNSPRFDFTSDSAV-- 1416

Query: 153  HIPLADLTPGSVIGKVEAADGDKGD--RVTLSLR-----GPYEKMFSINDS-GHISI--- 201
             +P  D   G  +  V+A D D G   +V  SL      G +E + + NDS G + +   
Sbjct: 1417 SVP-EDCPVGQRVATVKARDPDAGSNGQVVFSLASGNIAGAFE-IVTTNDSIGEVFVARP 1474

Query: 202  VDLSALNTSTIQLVVVATDTGNPPRQ 227
            +D   L+   ++  VVA+D G PPR+
Sbjct: 1475 LDREELDHYILK--VVASDRGTPPRK 1498



 Score = 43.5 bits (101), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 54/197 (27%), Positives = 87/197 (44%), Gaps = 24/197 (12%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRV----KYWLSNDYGERF-----SISRQ 94
           +F+ +EYSV+  E   V + L        RD  +    + +L  +    F     S+  +
Sbjct: 339 EFNSSEYSVAITELAQVGFALPLFIQVVDRDEGLNSMFEVYLVGNNSHHFIISPTSVQGK 398

Query: 95  GDISLMQC--LDYETEDSYRFTVYATDTL--MTTSATVNISVVNVNDWDPRFRYPQYELF 150
            DI +     LDYET D Y F ++A +++      A V I+++N ND  P F  P Y + 
Sbjct: 399 ADIRIRVAIPLDYETVDRYDFDLFANESVPDHVGYAKVKITLINENDNRPIFSQPLYNVS 458

Query: 151 LPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDSGHISIVDLSALN 208
           L      ++T G+ +  V A D D G    V        ++     D+G I ++  + L+
Sbjct: 459 L----YENVTVGTSVLTVLATDNDVGTFGEVNYFFSDDPDRFSLDKDTGLIMLI--AKLD 512

Query: 209 TSTIQ---LVVVATDTG 222
              IQ   L V+A D G
Sbjct: 513 YELIQRFTLTVIARDGG 529



 Score = 43.5 bits (101), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 62/235 (26%), Positives = 104/235 (44%), Gaps = 45/235 (19%)

Query: 65   LTVTTNKPRDLRVKYWLS---NDYG---------------ERFSIS-RQGDISLMQCLDY 105
            ++V+ + PRD RV  WL+   ND G                +FS+  R   +  +  LD 
Sbjct: 992  VSVSEDVPRDFRV-VWLNCTDNDVGLNAELSYFITGGNVDGKFSVGYRDAVVRTVVNLDR 1050

Query: 106  ETEDSYRFTVYATDT-----LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLT 160
            ET  +Y   + A D        T +ATV ++V++VND  P F    YE  +P     D+ 
Sbjct: 1051 ETTAAYTLVLEAIDNGPVGKRRTGTATVFVTVLDVNDNRPIFLQSSYEASVPE----DIP 1106

Query: 161  PGSVIGKVEAADGDKGDRVTLSLR---GPYEKMFSINDSGHISIVDLSALN---TSTIQL 214
             G  I ++ A D D+G+   +  R   G   K F I+ S  + +     L+    S+  L
Sbjct: 1107 EGHSIVQLMATDADEGEFGLVWYRILNGNDGKNFHIHVSDGLLMRGPKPLDREQASSHVL 1166

Query: 215  VVVATDTGNPPRQASVPAIMHFPE------AIVQQASSKL----NSGTSSTVLII 259
            +V A +    P ++SV  I++  +         QQ  S+L     +G  ++V+++
Sbjct: 1167 IVEAYNHDLGPMRSSVRVIVYVEDVNDEAPVFTQQQYSRLALRETAGIGTSVIVV 1221



 Score = 40.8 bits (94), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 70/289 (24%), Positives = 119/289 (41%), Gaps = 67/289 (23%)

Query: 4    EDDFL-QPITLVVRA----IQYDNQDRYALATLIVSKAGTS-----------LRELQFSK 47
            +D FL  P+T V+R     I  + Q+ Y L T++ S  GT            + ++   +
Sbjct: 2103 QDRFLIHPVTGVIRVGNVTIDREEQESYRL-TVVASDRGTVPLSGTAIITILIDDVNDCR 2161

Query: 48   NEY-----SVSALENLPVNYVLLTVTTNKPRDL--RVKYW------------LSNDYGER 88
             E+     +VS LE+     V+  VT    RDL  +++Y             L  D  + 
Sbjct: 2162 PEFLNPIQTVSVLESAEPGTVIANVTAID-RDLNPKLEYHIISIVAKDDTDRLVPDQEDA 2220

Query: 89   FSIS-RQGDISLMQCLDYETEDSYRFTVYATD--------TLMTTSATVNISVVNVNDWD 139
            F+++   G + +   L+ E   +Y  T+   D        ++   +A + +++++VND  
Sbjct: 2221 FAVNVNTGSVMVKSPLNRELVATYEVTLSVIDNASDLPERSVSVPNAKLTVNILDVNDNT 2280

Query: 140  PRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDSG 197
            PRF+ P    +     L   TPG+ +  V A D DKG    +T SL         +   G
Sbjct: 2281 PRFK-PFGITYYTEKVLEGATPGTTLIAVAAVDPDKGLNGLITYSL-------LDLMPPG 2332

Query: 198  HISIVDLSA-----------LNTSTIQLVVVATDTGNPPRQASVPAIMH 235
            ++ + D SA                +   V A D G+PPR A +P  + 
Sbjct: 2333 YVQLEDSSAGKVIANRTVDYEEVHWLNFTVRAADNGSPPRAAEIPVYLE 2381



 Score = 40.4 bits (93), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 42/130 (32%), Positives = 57/130 (43%), Gaps = 9/130 (6%)

Query: 95  GDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHI 154
           G + L Q LD ET+  +      +D     +  VNI V +VND  P F    Y + +P  
Sbjct: 77  GVVWLRQPLDRETKSEFTVEFSVSDHQGVITRKVNIQVGDVNDNAPTFHNQPYSVRIPE- 135

Query: 155 PLADLTPGSVIGKVEAADGD--KGDRVTLSLRGPYEKMFSINDSGHISIV--DLSALNTS 210
              D   G+ I  V A D D   G  V  S + P  + F+I+ +  I  V  +L    T 
Sbjct: 136 ---DTPVGTPIFIVNATDPDLGAGGSVLYSFQPP-SQFFAIDSARGIVTVIQELDYETTQ 191

Query: 211 TIQLVVVATD 220
             QL V ATD
Sbjct: 192 AYQLTVNATD 201


>gi|402872846|ref|XP_003919618.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin gamma-A5 [Papio
           anubis]
          Length = 812

 Score = 64.7 bits (156), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 63/200 (31%), Positives = 93/200 (46%), Gaps = 23/200 (11%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWLSND---YGERFSI-SRQGDI 97
           F+ +EYSVS  EN+PV   LLT+T   P +    ++ Y   N+     E F + S  G+I
Sbjct: 242 FTPSEYSVSVPENIPVGTRLLTLTATDPDEGINGKLTYSFRNEEDKISETFHLDSNLGEI 301

Query: 98  SLMQCLDYETEDSYRFTVYATD-TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
           S +Q LDYE    Y   V A D   +  SA V ++V +VND  P       E+ L  +  
Sbjct: 302 STLQPLDYEESRFYLMEVVAQDGGALLASAKVVVTVQDVNDNAP-------EVILTSLTS 354

Query: 157 A---DLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMF----SINDSGH-ISIVDLSALN 208
           +   D  PG+VI      DGD G+   ++   P    F    S+++  H ++  +L    
Sbjct: 355 SLSEDCLPGTVIALFSVHDGDSGENGEIACSIPRNLPFKLEKSVDNYYHLLTTRNLDREE 414

Query: 209 TSTIQLVVVATDTGNPPRQA 228
           TS   + +   D G PP  A
Sbjct: 415 TSDYNITLTVIDHGTPPLSA 434



 Score = 47.8 bits (112), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 58/209 (27%), Positives = 94/209 (44%), Gaps = 35/209 (16%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPR---DLRVKYWLSNDYGE----RFSISRQGDI 97
           F +  YS S  EN P    + +VT + P    + RV Y L+ D  +     F +S   D 
Sbjct: 452 FPQASYSTSLPENNPRGVSIFSVTAHDPDSGDNARVTYSLAEDTFQGAPLSFYVSINSDT 511

Query: 98  SLMQCL---DYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFL 151
            ++  L   DYE     +  V A+D     ++++ ++++ V++ ND  P   YP     L
Sbjct: 512 GVLYALRSFDYEQLRDLQLWVTASDNGNPPLSSNVSLSLFVLDQNDNAPEILYPT----L 567

Query: 152 P-----HIPLADLT--PGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-DSGHI- 199
           P      + LA  +  PG ++ KV A D D G    LS   L+     +F++   +G + 
Sbjct: 568 PTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYRLLKASEPGLFAVGLHTGEVR 627

Query: 200 ---SIVDLSALNTSTIQLVVVATDTGNPP 225
              +++D  AL  S   L+V   D G PP
Sbjct: 628 TARTLLDRDALKQS---LIVAVEDHGQPP 653



 Score = 38.5 bits (88), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 44/141 (31%), Positives = 59/141 (41%), Gaps = 17/141 (12%)

Query: 103 LDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADL 159
           LD E    Y  T+   D     ++    + + V +VND  P F    Y   LP     + 
Sbjct: 410 LDREETSDYNITLTVIDHGTPPLSAENHIPLKVADVNDNPPNFPQASYSTSLPE----NN 465

Query: 160 TPGSVIGKVEAADGDKGD--RVTLSLR------GPYEKMFSIN-DSGHI-SIVDLSALNT 209
             G  I  V A D D GD  RVT SL        P     SIN D+G + ++        
Sbjct: 466 PRGVSIFSVTAHDPDSGDNARVTYSLAEDTFQGAPLSFYVSINSDTGVLYALRSFDYEQL 525

Query: 210 STIQLVVVATDTGNPPRQASV 230
             +QL V A+D GNPP  ++V
Sbjct: 526 RDLQLWVTASDNGNPPLSSNV 546


>gi|344258353|gb|EGW14457.1| Cadherin EGF LAG seven-pass G-type receptor 1 [Cricetulus griseus]
          Length = 979

 Score = 64.7 bits (156), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 62/229 (27%), Positives = 106/229 (46%), Gaps = 22/229 (9%)

Query: 13  LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTT--- 69
           L V A+ + +  R A   L V+ + T+     F ++EY     ENL V Y +LT+     
Sbjct: 95  LKVSAVDHGSPRRSAATYLTVTVSDTNDHSPVFEQSEYRERIRENLEVGYEVLTIRATDG 154

Query: 70  NKPRDLRVKYWLSNDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDT-----LMT 123
           + P +  ++Y L    G  F I +R G +     +D E    Y+  V A D       ++
Sbjct: 155 DAPSNANMRYRLLEGAGGVFEIDARSGVVRTRAVVDREEAAEYQLLVEANDQGRNPGPLS 214

Query: 124 TSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS- 182
            SATV+I V + ND  P+F   +Y + +P     D+   + + +V+A D D+G    +  
Sbjct: 215 ASATVHIVVEDENDNYPQFSEKRYVVQVPE----DVAVNTAVLRVQATDRDQGQNAAIHY 270

Query: 183 --LRGPYEKMFSIND-SGHISIV---DLSALNTSTIQLVVVATDTGNPP 225
             + G  +  F ++  SG + ++   D  A+   T++  + A D G PP
Sbjct: 271 SIVSGNLKGQFYLHSLSGSLDVINPLDFEAIREYTLR--IKAQDGGRPP 317



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 53/191 (27%), Positives = 88/191 (46%), Gaps = 14/191 (7%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRDLR--VKYWLSN-DYGERFSISRQ---GDIS 98
           F++  Y +   E+  V   +LT+   + RD    + Y L+  +   RF++S Q   G I+
Sbjct: 461 FTQPVYELRLNEDAAVGSSVLTLRA-RDRDANSVITYQLTGGNTRNRFALSSQSGGGLIT 519

Query: 99  LMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLAD 158
           L   LDY+ E  Y   V A+D   + +A V I+V + N   P F+   Y + +      D
Sbjct: 520 LALPLDYKQERQYVLAVTASDGTRSHTAQVFINVTDANTHRPVFQSSHYTVSVSE----D 575

Query: 159 LTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSINDSGHI-SIVDLSALNTSTIQLV 215
              G+ I  + A D D G+  R+T  L  P  +     D+G I ++ +L   + +   L 
Sbjct: 576 RPVGTSIATISATDEDTGENARITYVLEDPVPQFRIDPDTGTIYTMTELDYEDQAAYTLA 635

Query: 216 VVATDTGNPPR 226
           + A D G P +
Sbjct: 636 ITAQDNGIPQK 646



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 49/168 (29%), Positives = 76/168 (45%), Gaps = 33/168 (19%)

Query: 45  FSKNEYSVSALENLPVNYVLL---TVTTNKPRDLRVKYWLSN------------------ 83
           F  + +  + LEN+P+ + +L    V  +   + R++Y L +                  
Sbjct: 339 FVSSPFQAAVLENVPLGHSVLHIQAVDADAGENARLQYRLVDTASPILGGSSVDPENPAS 398

Query: 84  --DYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVND 137
             D+   F I +  G I++   LD E  + Y F V A D     M++SA+V+I+V++VND
Sbjct: 399 APDFP--FQIHNSSGWITVCAELDREEIEHYSFGVEAVDHGSPPMSSSASVSITVLDVND 456

Query: 138 WDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRG 185
            DP F  P YEL L      D   GS +  + A D D    +T  L G
Sbjct: 457 NDPMFTQPVYELRLNE----DAAVGSSVLTLRARDRDANSVITYQLTG 500



 Score = 47.8 bits (112), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 38/140 (27%), Positives = 66/140 (47%), Gaps = 9/140 (6%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWL-SNDYGERFSISR-QGDISL 99
           F K+E  +   EN PV  V+  +  N P +    ++ Y +   +  E F +    GD+  
Sbjct: 773 FEKDELELFVEENSPVGSVVARIKANDPDEGPNAQIMYQIVEGNVPEVFQLDLLSGDLRA 832

Query: 100 MQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPH--IPLA 157
           +  LD+E +  Y   V AT   + + ATV+I +++ ND  P    P +++   +     +
Sbjct: 833 LVELDFEVQRDYMLVVQATSAPLVSRATVHIRLLDQNDNPPEL--PDFQILFNNYVTNKS 890

Query: 158 DLTPGSVIGKVEAADGDKGD 177
           +  P  VIG++ A D D  D
Sbjct: 891 NSFPSGVIGRIPAHDPDLSD 910



 Score = 44.7 bits (104), Expect = 0.081,   Method: Compositional matrix adjust.
 Identities = 54/210 (25%), Positives = 89/210 (42%), Gaps = 23/210 (10%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTTNKPRDL---RVKYWLSNDYGER----FSI-SRQG 95
           QF    Y VS  EN P    ++ +  + P +    R+ Y +   + ER    F I S  G
Sbjct: 18  QFPLPSYQVSVPENEPAGTAVIELRAHDPDEGEAGRLSYQMEALFDERSNGYFLIDSVTG 77

Query: 96  DISLMQCLDYETEDSYRFTVYATD--TLMTTSAT-VNISVVNVNDWDPRFRYPQYELFLP 152
            ++  + LD ET+D++   V A D  +   ++AT + ++V + ND  P F   +Y   + 
Sbjct: 78  AVTTARALDRETKDTHVLKVSAVDHGSPRRSAATYLTVTVSDTNDHSPVFEQSEYRERIR 137

Query: 153 HIPLADLTPGSVIGKVEAADGDKGDRVTLSLR--GPYEKMFSINDSGHI----SIVDLSA 206
                +L  G  +  + A DGD      +  R       +F I+    +    ++VD   
Sbjct: 138 E----NLEVGYEVLTIRATDGDAPSNANMRYRLLEGAGGVFEIDARSGVVRTRAVVDRE- 192

Query: 207 LNTSTIQLVVVATDTGNPPRQASVPAIMHF 236
              +  QL+V A D G  P   S  A +H 
Sbjct: 193 -EAAEYQLLVEANDQGRNPGPLSASATVHI 221


>gi|348557432|ref|XP_003464523.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 2-like [Cavia
            porcellus]
          Length = 4356

 Score = 64.7 bits (156), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 58/207 (28%), Positives = 95/207 (45%), Gaps = 23/207 (11%)

Query: 43   LQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGER---FSISRQ-GDIS 98
            L F +  YS + +E  PVN+++  ++      L   +W     G++   F I +  G I 
Sbjct: 1347 LAFDEPHYSFTVMETDPVNHMVGVISVEGRPGL---FWFRITDGDKNMDFDIEKTTGSIV 1403

Query: 99   LMQCLDYETEDSYRFTVYATDTLMTTSATVNISVV-NVNDWDPRFRYPQYELFLPHIPLA 157
            + + LD  T  SY  TV  TD     +  V I ++ NVN   P+F  P YE+ +P     
Sbjct: 1404 IARPLDTRTRSSYNLTVEVTDGFHIIATQVYIFLIANVNHHRPQFLEPHYEVRVPQ---- 1459

Query: 158  DLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSGHISIVDLSALNTSTIQLVVV 217
            D  PG  + +V+A D DKG  +          +++I  S  +    L  L+ ST  LV V
Sbjct: 1460 DTLPGVELLRVQATDEDKGKGL----------IYTIQGSQDLGSASLFQLDPSTGVLVTV 1509

Query: 218  AT-DTGNPPRQASVPAIMHFPEAIVQQ 243
               D G+ P Q ++  ++   E  +++
Sbjct: 1510 GKLDLGSGPSQHTLTVMVRDQEMPIKR 1536



 Score = 58.5 bits (140), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 60/191 (31%), Positives = 91/191 (47%), Gaps = 19/191 (9%)

Query: 45   FSKNEYSVSALENLPVN---YVLLTVTTNKPRDLRVKYWL---SNDYGERFSIS-RQGDI 97
            FS+  Y+ +  E LP       LL    +   +  V Y +    +D  + F I+   G++
Sbjct: 2272 FSQLVYTTAVSEGLPAQTSVIQLLASDQDSGHNRDVSYEIVEDGSDASKFFQINGSTGEM 2331

Query: 98   SLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHI 154
              +Q LDYE +  +   V ATD     +T    V ++V ++ND  P FR PQYE  +  +
Sbjct: 2332 VTLQELDYEAQRHFHVKVRATDRGNPPLTGETLVIVNVSDINDNPPEFRQPQYEANVSEL 2391

Query: 155  PLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-DSGHISIVDLSALN-T 209
                 T G ++ KV+A D D  D   L    L G  ++ FSIN  SG IS+++L      
Sbjct: 2392 ----ATCGHLVLKVQALDPDSRDTSRLEYLILSGNQDRHFSINKSSGIISMLNLCKKQLD 2447

Query: 210  STIQLVVVATD 220
            S+  L V A+D
Sbjct: 2448 SSYNLRVGASD 2458



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 63/202 (31%), Positives = 93/202 (46%), Gaps = 22/202 (10%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTT------NKPRDLRVKYWLSNDYGERFSISRQGD- 96
            +F+  +Y  S +EN     ++ T+ T       + R +   Y    D   +F+IS+ GD 
Sbjct: 2907 RFTSEDYRGSVVENSEPGELVTTLRTLDADISEQNRQVTC-YITEGDPLGQFAISQVGDE 2965

Query: 97   --ISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHI 154
              IS  + LD E    Y   + A+D    TS  V I V++VND  P+   PQ  L+   +
Sbjct: 2966 WRISSRKTLDREYMAKYLLRITASDGKFQTSVPVEIFVLDVNDNSPQC--PQL-LYTGRV 3022

Query: 155  PLADLTPGSVIGKVEAA--DGDKGDRVTLSLRGPYEKMFSIN-DSGHISIVDLSALNTS- 210
               D++PG  I KV A   D D   ++T SL GP    F +   +G ++   L+AL+   
Sbjct: 3023 -REDVSPGHFILKVSATDLDTDTNAQITYSLHGPGAHEFKMGPHTGELTT--LTALDRER 3079

Query: 211  --TIQLVVVATDTGNPPRQASV 230
                 LV  ATD G    QA V
Sbjct: 3080 KDMYSLVAKATDGGGRSCQADV 3101



 Score = 51.6 bits (122), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 43/142 (30%), Positives = 66/142 (46%), Gaps = 16/142 (11%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKP---RDLRVKYWLSNDYG----ERFSI-SRQGD 96
            F  + Y     EN+P    ++ VT N      D +V Y LS + G    E F+I S  G 
Sbjct: 2799 FEADPYKAFLTENMPGGTTVIQVTANDQDTGNDGQVSYRLSAEPGSSVHELFAIDSESGW 2858

Query: 97   ISLMQCLDYETEDSYRFTVYATD----TLMTTSATVNISVVNVNDWDPRFRYPQYELFLP 152
            I+ ++ LD ET  +YRF V A D      +++ A V +S+ + ND  PRF    Y   + 
Sbjct: 2859 ITTLKELDCETHQTYRFHVVAFDHGQTIQLSSQALVEVSITDENDNAPRFTSEDYRGSV- 2917

Query: 153  HIPLADLTPGSVIGKVEAADGD 174
               + +  PG ++  +   D D
Sbjct: 2918 ---VENSEPGELVTTLRTLDAD 2936



 Score = 47.8 bits (112), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 59/223 (26%), Positives = 97/223 (43%), Gaps = 21/223 (9%)

Query: 15   VRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKP-- 72
            VRA    N        +IV+ +  +    +F + +Y  +  E     +++L V    P  
Sbjct: 2349 VRATDRGNPPLTGETLVIVNVSDINDNPPEFRQPQYEANVSELATCGHLVLKVQALDPDS 2408

Query: 73   RDL-RVKYW-LSNDYGERFSISRQ-GDISLMQCLDYETEDSYRFTVYATDTLMTTSATVN 129
            RD  R++Y  LS +    FSI++  G IS++     + + SY   V A+D +   +  V 
Sbjct: 2409 RDTSRLEYLILSGNQDRHFSINKSSGIISMLNLCKKQLDSSYNLRVGASDGVFQATVPVY 2468

Query: 130  ISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTL------SL 183
            I+  N N + P F+   YE  L      +   G+ + ++ A D D G   T+       L
Sbjct: 2469 INTTNANKYSPEFQQHIYEAELAE----NAKEGTKVIELLAIDKDSGPYGTVDYTIINKL 2524

Query: 184  RGPYEKMFSINDSGHISIVDLSALNTST---IQLVVVATDTGN 223
             G   + FSIN +G I+ +       ST   I + V+A D G 
Sbjct: 2525 AG---EKFSINPNGQITTLQKLDRENSTERVIAIKVMARDGGG 2564



 Score = 47.0 bits (110), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 52/192 (27%), Positives = 82/192 (42%), Gaps = 15/192 (7%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGERFSIS--RQGDISLMQC 102
            F    Y V   EN+ +   +L      P  LR+ Y +  +       +  + G +++   
Sbjct: 2171 FQSPYYRVRVPENITLYTPILHTQARSPEGLRLIYNIVEEESLPLFTTDFKTGVLTVTGP 2230

Query: 103  LDYETEDSYRFTVYATDTLMT--TSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLT 160
            LDYE++  + FTV ATDT +   + ATV + V +VND  P F    Y   +       L 
Sbjct: 2231 LDYESKTRHIFTVRATDTALGSFSEATVEVFVEDVNDNPPTFSQLVYTTAVSE----GLP 2286

Query: 161  PGSVIGKVEAADGDKGDRVTLSLR-----GPYEKMFSINDSG--HISIVDLSALNTSTIQ 213
              + + ++ A+D D G    +S           K F IN S    +++ +L         
Sbjct: 2287 AQTSVIQLLASDQDSGHNRDVSYEIVEDGSDASKFFQINGSTGEMVTLQELDYEAQRHFH 2346

Query: 214  LVVVATDTGNPP 225
            + V ATD GNPP
Sbjct: 2347 VKVRATDRGNPP 2358



 Score = 45.4 bits (106), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 45/143 (31%), Positives = 74/143 (51%), Gaps = 11/143 (7%)

Query: 95   GDISLMQCLDYETEDSYRFTVYATD----TLMTTSATVNISVVNVNDWDPRFRYPQYELF 150
            G +S  + LD E++D +   V   D    +L +TS  V + ++++ND  P F +  + + 
Sbjct: 1192 GLLSTARQLDRESKDEHILEVTVLDNGEPSLRSTSRVV-VCILDINDNAPTFSHKLFNVR 1250

Query: 151  LPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIND-SGHISIVDLSAL 207
            LP  P +  +PG+V  ++ A+D D G    VT S+    E+ FSI+  +G +S       
Sbjct: 1251 LPERP-SPASPGAVY-RLVASDPDDGLNGSVTYSIEESDEEGFSIDPVTGVVSSSSTFTA 1308

Query: 208  NTSTIQLVVVATDTGNPPRQASV 230
                I L + ATD+G PP  +SV
Sbjct: 1309 GEYNI-LTIKATDSGQPPLSSSV 1330



 Score = 45.1 bits (105), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 36/132 (27%), Positives = 62/132 (46%), Gaps = 1/132 (0%)

Query: 12   TLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNK 71
            TL+V+A  + +  ++ LAT++V    ++     FS  EY V   E++PV   +L V+   
Sbjct: 1627 TLMVKAEDHGSPRKHDLATVVVHVYPSASSAPIFSNTEYFVEVPESIPVGSPILLVSATS 1686

Query: 72   PRDLRVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDTLMT-TSATVNI 130
            P ++  +    N  G     S  G IS  + LD+E   SY+  +  +      T   V +
Sbjct: 1687 PSEVTYELREGNKDGVFSMNSYSGLISTQKNLDHEKISSYQLKIRGSSMAGAFTDIVVLV 1746

Query: 131  SVVNVNDWDPRF 142
             +++ ND  P F
Sbjct: 1747 DIIDDNDNAPMF 1758



 Score = 43.9 bits (102), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 53/209 (25%), Positives = 92/209 (44%), Gaps = 15/209 (7%)

Query: 28   LATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTT-NKPRDLRVKYWL--SND 84
            + T+ VS  G       F   E+S+   E+ P    +L++    +P   +  Y +   N+
Sbjct: 3203 MGTVSVSVVGLEDYLPVFLNTEHSLQVREDAPPGAQVLSLAALTRPGAEKTGYRMVSGNE 3262

Query: 85   YGERFSISRQGDISLMQCLDYETEDSYRFTVYA---TDTLMTTSATVNISVVNVNDWDPR 141
             G+    +R G + + + LD+ET   Y  ++         ++   T+ ++V +VN+  PR
Sbjct: 3263 QGQFRLDTRTGILYVNRSLDFETSPKYFLSIECIRKASASLSDVTTIVVNVTDVNEHHPR 3322

Query: 142  FRYPQYELFLPHIPLADLTPGSVIGKVEAADGDK--GDRVTLSLRGPYE-KMFSIN-DSG 197
            F    Y   +    L +   G +I  V A D D      +T SL G  +   F+I+   G
Sbjct: 3323 FPKDLYSARV----LENAIRGDIILTVSATDEDGPLNSAITYSLVGGNQLGHFTIHPKKG 3378

Query: 198  HISIVD-LSALNTSTIQLVVVATDTGNPP 225
             + +   L    TS+  L + ATD+G PP
Sbjct: 3379 ELQVAKALDWEQTSSYSLKLRATDSGQPP 3407



 Score = 42.7 bits (99), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 61/201 (30%), Positives = 86/201 (42%), Gaps = 24/201 (11%)

Query: 41   RELQFSKNEYSVSALENLPVNYVLLTVTTNKPR-DLRVKYWLSNDYGERFSISRQGDISL 99
            + LQF +  Y     ENLP    L+ +  +    +  + Y L N   + F + R   +  
Sbjct: 1964 KSLQFDQEVYRTKVKENLPDRKALVILGAHGHHLNDTLSYALLNGT-DLFHVVRSAGVLQ 2022

Query: 100  MQ--CLDYETEDSYRFTVYATDTLM---TTSATVNISVVNVNDWDPRFRY-PQYELFLPH 153
             +   LD E +D +   V   D         A V +SV +VND  P F++ P Y +    
Sbjct: 2023 TRGVALDREQQDVHEVVVEVRDNRAPPRVAQAVVRVSVEDVNDNPPEFKHLPYYTI---- 2078

Query: 154  IPLADLT-PGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDS-GHISI---VDLSA 206
              + D T PG V+ +V A D D G    VT +    Y   F I+   G IS+    D  A
Sbjct: 2079 --VQDGTEPGDVLFQVSATDRDLGASGTVTYAFTEDY-TYFRIDPYVGDISLKKPFDYQA 2135

Query: 207  LNTSTIQLVVVATDTGNPPRQ 227
            LN    +L VVA D G P  Q
Sbjct: 2136 LN--KYRLKVVALDGGTPSLQ 2154



 Score = 40.8 bits (94), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 61/251 (24%), Positives = 110/251 (43%), Gaps = 40/251 (15%)

Query: 11   ITLVVRAIQYDNQDRYALATLIVSKAGTSLREL---------------QFSKNEYSVSAL 55
            I  V R++ ++   +Y L+   + KA  SL ++               +F K+ YS   L
Sbjct: 3274 ILYVNRSLDFETSPKYFLSIECIRKASASLSDVTTIVVNVTDVNEHHPRFPKDLYSARVL 3333

Query: 56   ENLPVNYVLLTVTT---NKPRDLRVKYWL--SNDYGERFSISRQGDISLMQCLDYETEDS 110
            EN     ++LTV+    + P +  + Y L   N  G      ++G++ + + LD+E   S
Sbjct: 3334 ENAIRGDIILTVSATDEDGPLNSAITYSLVGGNQLGHFTIHPKKGELQVAKALDWEQTSS 3393

Query: 111  YRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTP-GSVIG 166
            Y   + ATD+    + +   +++ VV+VND  PRF    Y        + + +P GS + 
Sbjct: 3394 YSLKLRATDSGQPPLHSDVDIDVQVVDVNDNPPRFFQLNYS-----TAVQENSPVGSQVL 3448

Query: 167  KVEAADGDKGD-------RVTLSLRGPYEKMFSINDSGH-ISIVDLSALNTSTIQLVVVA 218
            ++  +D D  +       R+T   +G     F +   G  ++   LS       QL +  
Sbjct: 3449 QLILSDPDSPENGPPYSFRIT---KGNAGSAFRVTPEGWLVTTAGLSRAAQEQYQLQIEV 3505

Query: 219  TDTGNPPRQAS 229
            +D+G PP  +S
Sbjct: 3506 SDSGTPPLSSS 3516



 Score = 39.7 bits (91), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 44/155 (28%), Positives = 68/155 (43%), Gaps = 17/155 (10%)

Query: 51  SVSALENLPVNYVLLTVTTNKPR---DLRVKYWLSNDYGERFSISRQGDISLMQC---LD 104
           S+  LE +PVN  L  +    P    + ++ Y ++ D  E      + D  L+     LD
Sbjct: 721 SIDILECVPVNTSLARLAAADPDAGFNGQLVYVIT-DGNEDGCFDIELDTGLLMVAAPLD 779

Query: 105 YETEDSYRFTVYATDTLMTTSATVNISVVNVNDWD---PRFRYPQYELFLPHIPLADLTP 161
           YET   Y   +   D      ++  +  VNV DW+   PRF    Y+L +      D   
Sbjct: 780 YETTSFYLLNITVYDLGTPQKSSWKLLAVNVKDWNDNAPRFPPGGYQLTISE----DTEV 835

Query: 162 GSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSIN 194
           G+ I +++  D D  D  RV  +L  P EK FS++
Sbjct: 836 GTTIAELKTEDEDSEDNGRVRYTLLSPTEK-FSLH 869



 Score = 38.9 bits (89), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 35/118 (29%), Positives = 56/118 (47%), Gaps = 10/118 (8%)

Query: 128  VNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LR 184
            V + V + N   PRF    YE  +P      + PG+ + +V+A D D+G    +    L+
Sbjct: 1541 VTVHVKDGNIHPPRFTQLHYEARVPDT----IAPGAELLQVQAVDADRGANAEVHYSLLK 1596

Query: 185  GPYEKMFSIND-SGHISIV-DLSALNTSTIQLVVVATDTGNPPRQASVPAIMH-FPEA 239
            G  E  FSI+   G I++   L+  N     L+V A D G+P +      ++H +P A
Sbjct: 1597 GNSEDFFSIDVLQGIITVARKLNQANHIRHTLMVKAEDHGSPRKHDLATVVVHVYPSA 1654


>gi|307188566|gb|EFN73294.1| Protocadherin-like wing polarity protein stan [Camponotus floridanus]
          Length = 3165

 Score = 64.7 bits (156), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 72/244 (29%), Positives = 113/244 (46%), Gaps = 19/244 (7%)

Query: 6    DFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLL 65
            D+ Q    V+     D+  R   A + V+ +  +     F    YSVS  E+ PV   +L
Sbjct: 765  DYKQEKRFVLTVTASDSGGRTDTALVYVNVSDANNFSPVFENAPYSVSVFEDAPVGVTVL 824

Query: 66   TVT---TNKPRDLRVKYWLSNDYGER----FSISRQ-GDISLMQCLDYETEDSYRFTVYA 117
             V+   ++  ++ ++ Y L+ D GE+    F+I+ Q G I+  + LD E   SY  TV A
Sbjct: 825  VVSATDSDVGKNAQITYSLATDNGEQTINEFTINPQTGAITTTKALDRELIPSYLLTVTA 884

Query: 118  TDTL---MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEA--AD 172
             D     ++ +  V ISV +VND  P F  PQY   L  IP  D+  G+ + ++ A  AD
Sbjct: 885  RDGGIPPLSDTTDVEISVTDVNDNAPVFEAPQY---LGSIP-EDVLVGTSVVRIAATDAD 940

Query: 173  GDKGDRVTLSLRGPYEKMFSINDSGHI--SIVDLSALNTSTIQLVVVATDTGNPPRQASV 230
             D   RV  +L    +  F+I+    I  +   L   + +   L   A D G+P   + V
Sbjct: 941  TDLNGRVRYALEDDGDGAFAIDSMTGIVRTAKPLDRESVARYTLKAAAIDRGSPALSSVV 1000

Query: 231  PAIM 234
            P I+
Sbjct: 1001 PVIV 1004



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 64/229 (27%), Positives = 101/229 (44%), Gaps = 23/229 (10%)

Query: 13  LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTT--- 69
           +V+RA    +  R     L+V     +    +F  + +  S  EN+P+ Y +L V     
Sbjct: 558 IVIRAQDGGSPARSNTTQLLVMVKDVNDNAPRFYTSHFQESVSENVPLGYSVLRVQAYDA 617

Query: 70  NKPRDLRVKYWL-SNDYG----ERFSI---SRQGDISLMQCLDYETEDSYRFTVYATDTL 121
           ++  +  +KY + + D+     E F I   +  G I   + LD E    Y+F V A D+ 
Sbjct: 618 DESNNALIKYNIGARDFTGASTENFPITVNAETGWIYTTKQLDREQCSRYQFIVIAMDSG 677

Query: 122 ---MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDR 178
               + SATV ++V +VND DP F    YE  +      D  PG+ +  V A D D+  R
Sbjct: 678 EEPKSASATVILTVTDVNDNDPYFEPKNYEAVISE----DDPPGTPVASVTATDPDEDAR 733

Query: 179 VTLSLRGPYEK-MFSI---NDSGHISIVD-LSALNTSTIQLVVVATDTG 222
           +   + G   +  FSI   N  G I++   L         L V A+D+G
Sbjct: 734 IHYEITGGNTRGRFSIASQNGRGLITVAQPLDYKQEKRFVLTVTASDSG 782



 Score = 51.6 bits (122), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 56/213 (26%), Positives = 96/213 (45%), Gaps = 27/213 (12%)

Query: 44  QFSKNEYSVSALENL-----PVNYVLLTVTTNKPRDLRVKYWL-SNDYGERFSI-SRQGD 96
           QF++  YS S  E+L     PV   +     +   +  V+Y +   +    FSI S  GD
Sbjct: 482 QFTERTYSASVSEDLDYTSNPVVARIRATDADAGANAAVRYAIIGGNTQNTFSIDSMSGD 541

Query: 97  ISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQY-ELFLP 152
           ++L++ LDYE+  +Y+  + A D      + +  + + V +VND  PRF    + E    
Sbjct: 542 VALVKPLDYESIRNYKIVIRAQDGGSPARSNTTQLLVMVKDVNDNAPRFYTSHFQESVSE 601

Query: 153 HIPLADLTPGSVIGKVEAADGDKGDRVTLS-------LRGPYEKMFSIN---DSGHI-SI 201
           ++PL     G  + +V+A D D+ +   +          G   + F I    ++G I + 
Sbjct: 602 NVPL-----GYSVLRVQAYDADESNNALIKYNIGARDFTGASTENFPITVNAETGWIYTT 656

Query: 202 VDLSALNTSTIQLVVVATDTGNPPRQASVPAIM 234
             L     S  Q +V+A D+G  P+ AS   I+
Sbjct: 657 KQLDREQCSRYQFIVIAMDSGEEPKSASATVIL 689



 Score = 45.4 bits (106), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 53/207 (25%), Positives = 90/207 (43%), Gaps = 27/207 (13%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWL----------SNDYGERFSI 91
           F  +EY  +  E +PV   ++TV     +  R+  V+Y +            +    F I
Sbjct: 366 FEWSEYDATVREGVPVGSTVVTVKATDQDTGRNAEVEYCIISTTAGDTTTHTEDAATFRI 425

Query: 92  -SRQGDISLMQCLDYETEDSYRFTVYATD------TLMTTSATVNISVVNVNDWDPRFRY 144
            SR G ++    LD E  + Y   +  TD      T  +T+AT+ + V++ ND  P+F  
Sbjct: 426 DSRSGVVTTRTPLDREVIEVYTVVLSVTDQATPPSTRRSTNATLMVRVLDDNDNYPQFTE 485

Query: 145 PQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIND-SGHIS 200
             Y   +      D T   V+ ++ A D D G    +    + G  +  FSI+  SG ++
Sbjct: 486 RTYSASVSED--LDYTSNPVVARIRATDADAGANAAVRYAIIGGNTQNTFSIDSMSGDVA 543

Query: 201 IVD-LSALNTSTIQLVVVATDTGNPPR 226
           +V  L   +    ++V+ A D G+P R
Sbjct: 544 LVKPLDYESIRNYKIVIRAQDGGSPAR 570


>gi|432106415|gb|ELK32208.1| Cadherin-17 [Myotis davidii]
          Length = 829

 Score = 64.7 bits (156), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 75/296 (25%), Positives = 126/296 (42%), Gaps = 39/296 (13%)

Query: 14  VVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPR 73
           +V  +QY N   +A  TL V+    +    QF ++ +     E++ +   +  +T   P 
Sbjct: 536 LVSGVQY-NASSFATFTLFVTNVNEAP---QFPQHIFQAKVSEDVAIGTKVGNMTAKDPE 591

Query: 74  DLRVKYWLSNDYGERFSIS-RQGDISLMQCLDYETEDSYRFTVYATD---TLMTTSATVN 129
            L + Y L  D      I    G+I     LD E E  YR  V AT+   + ++T+A  N
Sbjct: 592 GLDISYSLRGDTRGWLRIDPATGEIFSAAPLDREAESLYRVQVVATEVGGSSLSTAAGFN 651

Query: 130 ISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEK 189
           +++ +VND  PR       LF  H PL+   PGS I  ++A D D       S RGP + 
Sbjct: 652 LALTDVNDNPPRLAKEYTGLFFCH-PLS--APGSHI--IQATDDD-----LQSFRGP-QF 700

Query: 190 MFSINDSGHISIVDLSALNTSTIQLVVVAT--------------DTGNPPRQASVPAIMH 235
            F++      +  ++S +N +  +L    T              D G PP + +V   + 
Sbjct: 701 TFALGSESLQNDWEISKINGTHARLSTKHTRFEERVYNVPIRINDGGRPPLEGTVSLPVT 760

Query: 236 FPEAIVQQASSKLNS-----GTSSTVLIILGVVLIVLGFVIILLILYIHKNKHTKN 286
           F   +  +    +          STV I+L    +V+G ++ ++ + + KNK   N
Sbjct: 761 FCSCVEGRCFRPVGHMPGIPTVGSTVGILL-TTFLVIGVILTVVFIRMKKNKGKDN 815


>gi|431904131|gb|ELK09553.1| Cadherin-23 [Pteropus alecto]
          Length = 1499

 Score = 64.7 bits (156), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 60/195 (30%), Positives = 90/195 (46%), Gaps = 20/195 (10%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWLSNDYGERFSIS-RQGDISLM 100
           F +  Y  +  E++PV  V+LTVT           ++Y L +  G +FSI+   GDI ++
Sbjct: 547 FDQPSYQEAVFEDVPVGTVILTVTATDADSGNFALIEYSLGDGEG-KFSINPTTGDIYVL 605

Query: 101 QCLDYETEDSYRFTVYATD-------TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
             LD E +D Y  T  A D            S  V I V++VND  P+F  PQ+   +  
Sbjct: 606 SSLDREKKDHYILTALAKDNPGDIASNRRENSVQVVIQVLDVNDCRPQFSKPQFSTSV-- 663

Query: 154 IPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIN-DSGHISIVDLSALNTS 210
               +   G+ +  + A D D+G    +  SL GP  + F ++ DSG ++       +  
Sbjct: 664 --YENEPAGTSVITMMATDQDEGTNGELAYSLEGPGVEAFHVDMDSGLVT-TKRPLHSYE 720

Query: 211 TIQLVVVATDTGNPP 225
              L VVATD G PP
Sbjct: 721 RFNLTVVATDGGEPP 735



 Score = 44.7 bits (104), Expect = 0.075,   Method: Compositional matrix adjust.
 Identities = 54/215 (25%), Positives = 95/215 (44%), Gaps = 36/215 (16%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVT-TNKPRDL--RVKYWLSNDYGERFSIS------RQG 95
           FS    ++  LEN P  + +L VT T++   L   + Y +     +RF I       R G
Sbjct: 214 FSPAALTIHLLENCPPGFSVLQVTATDEDSGLNGELIYRIEAGAQDRFLIHPVTGVIRVG 273

Query: 96  DISLMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLP 152
           + ++    D E ++SYR T+ ATD     ++ +A + I + ++ND  P F  P   + + 
Sbjct: 274 NATI----DREEQESYRLTIVATDRGTIPLSGTAIITILIDDINDCRPEFLNPIQTVSV- 328

Query: 153 HIPLADLTPGSVIGKVEAADGDKGDRVTLSLRG------------PYEKMFSIN-DSGHI 199
              L    PG+VI  V A D D   ++   + G              E  F++N ++G +
Sbjct: 329 ---LESAEPGTVIANVTAIDRDLNPKLEYHIIGIMAKDDTDRLVTDQEDAFAVNINTGSV 385

Query: 200 SI---VDLSALNTSTIQLVVVATDTGNPPRQASVP 231
            +   ++   + T  + L V+   +  P R  S+P
Sbjct: 386 MVKSPLNRELVATYEVTLSVIDNASDLPERSVSMP 420



 Score = 37.7 bits (86), Expect = 9.2,   Method: Compositional matrix adjust.
 Identities = 65/287 (22%), Positives = 119/287 (41%), Gaps = 63/287 (21%)

Query: 4   EDDFL-QPITLVVRA----IQYDNQDRYALATLIVSKAGTS-----------LRELQFSK 47
           +D FL  P+T V+R     I  + Q+ Y L T++ +  GT            + ++   +
Sbjct: 258 QDRFLIHPVTGVIRVGNATIDREEQESYRL-TIVATDRGTIPLSGTAIITILIDDINDCR 316

Query: 48  NEY-----SVSALENLPVNYVLLTVTTNKPRDL--RVKYW------------LSNDYGER 88
            E+     +VS LE+     V+  VT    RDL  +++Y             L  D  + 
Sbjct: 317 PEFLNPIQTVSVLESAEPGTVIANVTAID-RDLNPKLEYHIIGIMAKDDTDRLVTDQEDA 375

Query: 89  FSIS-RQGDISLMQCLDYETEDSYRFTVYATD--------TLMTTSATVNISVVNVNDWD 139
           F+++   G + +   L+ E   +Y  T+   D        ++   +A + +++++VND  
Sbjct: 376 FAVNINTGSVMVKSPLNRELVATYEVTLSVIDNASDLPERSVSMPNAKLTVNILDVNDNT 435

Query: 140 PRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSGHI 199
           P+F+ P    +     L   TPG+ +  V A D DKG    ++       +  +   G++
Sbjct: 436 PQFK-PFGITYYTERVLEGATPGTTLIAVAAVDPDKGLNGLITY-----TLLDLVPPGYV 489

Query: 200 SIVDLSA-----------LNTSTIQLVVVATDTGNPPRQASVPAIMH 235
            + D SA                +   V A+D G+PPR A +P  + 
Sbjct: 490 QLEDSSAGKVIANRTVDYEEVHWLNFTVRASDHGSPPRAAEIPVYLE 536


>gi|410906919|ref|XP_003966939.1| PREDICTED: protocadherin-7-like [Takifugu rubripes]
          Length = 1254

 Score = 64.7 bits (156), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 64/196 (32%), Positives = 93/196 (47%), Gaps = 14/196 (7%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGERFSI-SRQGDISLM 100
           FS+N   VS  EN      + TVT    +  ++  + Y L +     FSI +  GDI + 
Sbjct: 502 FSQNVVEVSFPENNGPGERVTTVTAVDADSGKNAEIAYSLDSAVNGIFSIDADTGDIRVN 561

Query: 101 QCLDYETEDSYRFTVYATDTLMTT---SATVNISVVNVNDWDPRFRYPQYELFLPHIPLA 157
             LD E  + Y F V A D  + T   SATV + V + ND +P+F    +  ++      
Sbjct: 562 TILDREHTERYEFKVIAKDKGVNTLQGSATVVVLVSDKNDNEPKFMQDVFTFYVKE---- 617

Query: 158 DLTPGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSI-NDSGHI-SIVDLSALNTSTIQL 214
           +L P S +G V   D DKG    +SL     E++FSI N++G I S +       +T   
Sbjct: 618 NLEPNSPVGMVTVIDADKGHNAEMSLFIEEEEEVFSIENETGTIFSTLSFDREQKTTYTF 677

Query: 215 VVVATDTGNPPRQASV 230
            V A D G+PPR A+ 
Sbjct: 678 RVKAVDGGDPPRSATA 693



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 41/158 (25%), Positives = 73/158 (46%), Gaps = 22/158 (13%)

Query: 93  RQGDISLMQCLDYETEDSYRFTVY---ATDTLMTTSATVNISVVNVNDWDPRFRYPQYEL 149
           +Q  + +   LD E  DSY  T+      D   ++ A + + + +VND  PRF    YE 
Sbjct: 223 KQPQLIIKGALDREQRDSYELTLRVRDGGDPPRSSQAILRVMITDVNDNSPRFEKSVYEA 282

Query: 150 FLPHIPLADLTPGSVIGKVEAADGDKG---------DRVTLSLRGPYEKMFSINDS-GHI 199
            LP     + +PGS I +++A D D G            T S+R    ++  +++S G +
Sbjct: 283 DLPE----NSSPGSPILQLKATDADVGVNGQIEYVFGAATESVR----RLLRLDESTGWL 334

Query: 200 SIVD-LSALNTSTIQLVVVATDTGNPPRQASVPAIMHF 236
           S++  +     S ++  V+A D G PP+      +++ 
Sbjct: 335 SVLHRIDREEVSQLRFTVMARDRGQPPKMDKATVVLNI 372



 Score = 39.7 bits (91), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 73/315 (23%), Positives = 136/315 (43%), Gaps = 42/315 (13%)

Query: 29  ATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVT---TNKPRDLRVKYWLSNDY 85
           AT++V  +  +  E +F ++ ++    ENL  N  +  VT    +K  +  +  ++  + 
Sbjct: 590 ATVVVLVSDKNDNEPKFMQDVFTFYVKENLEPNSPVGMVTVIDADKGHNAEMSLFIEEEE 649

Query: 86  GERFSISRQ-GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPR 141
            E FSI  + G I      D E + +Y F V A D      + +ATV++ V++ ND  P 
Sbjct: 650 -EVFSIENETGTIFSTLSFDREQKTTYTFRVKAVDGGDPPRSATATVSLFVMDENDNAPT 708

Query: 142 FRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSINDSGH 198
             +P+   +    P ++L   +++ KV A D D G    L+   + G   K+F I D G 
Sbjct: 709 VTFPKNSSYTLLPPSSNLR--TLVRKVIATDTDTGINADLNYSIIGGNPFKLFEI-DGGT 765

Query: 199 ISIVDLSALNTSTI---QLVVVATDTGNPPRQASVPAIMHFPEA----------IVQQAS 245
             I+ +  L        +LVV   D+G P +  +    ++  E           + +  S
Sbjct: 766 GVILLMGKLEPRHYGLHRLVVQVNDSGQPSQSTTTFVHVYVNETLSNSTVVEAQVAKSMS 825

Query: 246 SKLNSGTSS---------TVLIILGVVLIVLGFVIILLILYIHKNKHTKN-NGPPGSSHS 295
           + LN+  +           + I +GV+  ++  ++I+L++ + +    KN NG       
Sbjct: 826 TSLNTNIAGDPNSDLNKQRLSIAIGVISGIMTVILIILVVVMARYCRPKNKNGYEAGKKD 885

Query: 296 KNDSFLSNVILPEKH 310
             D F      P++H
Sbjct: 886 HEDFF-----TPQQH 895


>gi|395820216|ref|XP_003783470.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 1 [Otolemur
           garnettii]
          Length = 3016

 Score = 64.7 bits (156), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 62/229 (27%), Positives = 106/229 (46%), Gaps = 22/229 (9%)

Query: 13  LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTT--- 69
           L V A+ + +  R A   L V+ + T+     F ++EY     ENL V Y +LT+     
Sbjct: 339 LKVSAVDHGSPRRSAATYLTVTVSDTNDHSPVFEQSEYRERVRENLEVGYEVLTIRATDG 398

Query: 70  NKPRDLRVKYWLSNDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDT-----LMT 123
           + P +  ++Y L    G  F I +R G +     +D E    YR  V A D       ++
Sbjct: 399 DAPSNANMRYRLLEGAGGIFEIDARSGVVRTRAVVDREEGAEYRLLVEADDQGRNPGPLS 458

Query: 124 TSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS- 182
            +ATV+I V + ND  P+F   +Y + +P     D+   + + +V+A D D+G    +  
Sbjct: 459 ATATVHIVVEDENDNYPQFSEKRYVVQVPE----DVAVNTAVLRVQATDRDQGQNAAIHY 514

Query: 183 --LRGPYEKMFSIND-SGHISIV---DLSALNTSTIQLVVVATDTGNPP 225
             + G  +  F ++  SG + ++   D  A+   T++  + A D G PP
Sbjct: 515 SIVSGNLKGQFYLHSLSGSLDVINPLDFEAIREYTLR--IKAQDGGRPP 561



 Score = 54.7 bits (130), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 49/161 (30%), Positives = 75/161 (46%), Gaps = 24/161 (14%)

Query: 45  FSKNEYSVSALENLPVNYVLL---TVTTNKPRDLRVKYWL-------------SNDYGER 88
           F  + +  + LEN+P+ Y +L    V  +   + R++Y L             +   G  
Sbjct: 583 FVSSPFQAAVLENVPLGYSVLHIQAVDADAGENARLRYRLVDTASAGPGSESAATTPGFP 642

Query: 89  FSI-SRQGDISLMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRY 144
           F I +  G I++   LD E  + Y F V A D     M++SA+V+I+V++VND DP F  
Sbjct: 643 FQIHNSSGWITVCAELDREEVERYSFAVEAVDHGSPPMSSSASVSITVLDVNDNDPVFTQ 702

Query: 145 PQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRG 185
           P YE+ L      D   GS +  + A D D    +T  L G
Sbjct: 703 PMYEVRLNE----DAAVGSSVLTLRAEDRDANSVITYQLTG 739



 Score = 51.6 bits (122), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 54/189 (28%), Positives = 86/189 (45%), Gaps = 14/189 (7%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRDLR--VKYWLSN-DYGERFSISRQ---GDIS 98
           F++  Y V   E+  V   +LT+     RD    + Y L+  +   RF++S Q   G I+
Sbjct: 700 FTQPMYEVRLNEDAAVGSSVLTLRAED-RDANSVITYQLTGGNTRNRFALSSQSGGGLIT 758

Query: 99  LMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLAD 158
           L   LDY+ E  Y   V A+D + + +A V I++ + N   P F+   Y + +      D
Sbjct: 759 LALPLDYKQERQYVLAVTASDGMRSHTAQVFINITDANTHRPVFQSSHYTVSVSE----D 814

Query: 159 LTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSINDSGHI-SIVDLSALNTSTIQLV 215
              G+ I  + A D D G+  RVT  L  P  +     D+G I +  +L   + +   L 
Sbjct: 815 QPVGTSIATISATDEDTGENARVTYVLEDPVPQFRIDPDTGTIYTTTELDYEDQAAYTLA 874

Query: 216 VVATDTGNP 224
           + A D G P
Sbjct: 875 ITARDNGIP 883



 Score = 43.1 bits (100), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 46/197 (23%), Positives = 90/197 (45%), Gaps = 28/197 (14%)

Query: 7    FLQPITLVVRAIQYDNQDR---YALATLIVSKAG----TSLRELQ------------FSK 47
            +++P + V+R  +  +++    Y+L  L V +      ++L E+Q            F +
Sbjct: 955  YIEPTSGVIRTQRRLDREHVAVYSLRALAVDRGSPAPLSALVEIQVTVLDINDNPPVFER 1014

Query: 48   NEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWL-SNDYGERFSISR-QGDISLMQC 102
            +E  +   EN PV  V+  +  + P +    ++ Y +   +  E F +    GD+  +  
Sbjct: 1015 DELELFVEENSPVGSVVARIHADDPDEGPNAQIMYQIVEGNVPEVFQLDLLSGDLRALVE 1074

Query: 103  LDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPH--IPLADLT 160
            LD+E +  Y   V AT   + + ATV+I +++ ND  P    P +++   +     ++  
Sbjct: 1075 LDFEVQREYVLVVQATSAPLVSRATVHIRLLDQNDNPPVL--PDFQILFNNYVTNKSNSF 1132

Query: 161  PGSVIGKVEAADGDKGD 177
            P  VIG++ A D D  D
Sbjct: 1133 PTGVIGRIPARDPDLSD 1149



 Score = 42.7 bits (99), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 54/209 (25%), Positives = 88/209 (42%), Gaps = 23/209 (11%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTTNKP---RDLRVKYWLSNDYGER----FSI-SRQG 95
           QF    Y VS  EN P    ++ +  + P      R+ Y +   + ER    F I S  G
Sbjct: 262 QFPLPSYQVSVPENQPAGTAVIELRAHDPDAGEAGRLSYQMEALFDERSNGYFLIDSDTG 321

Query: 96  DISLMQCLDYETEDSYRFTVYATD--TLMTTSAT-VNISVVNVNDWDPRFRYPQYELFLP 152
            +S  + LD ET+D++   V A D  +   ++AT + ++V + ND  P F   +Y   + 
Sbjct: 322 AVSTARALDRETQDTHVLKVSAVDHGSPRRSAATYLTVTVSDTNDHSPVFEQSEYRERV- 380

Query: 153 HIPLADLTPGSVIGKVEAADGDKGDRVTLSLR--GPYEKMFSINDSGHI----SIVDLSA 206
                +L  G  +  + A DGD      +  R       +F I+    +    ++VD   
Sbjct: 381 ---RENLEVGYEVLTIRATDGDAPSNANMRYRLLEGAGGIFEIDARSGVVRTRAVVDRE- 436

Query: 207 LNTSTIQLVVVATDTGNPPRQASVPAIMH 235
              +  +L+V A D G  P   S  A +H
Sbjct: 437 -EGAEYRLLVEADDQGRNPGPLSATATVH 464


>gi|224043651|ref|XP_002200195.1| PREDICTED: protocadherin Fat 3 [Taeniopygia guttata]
          Length = 4557

 Score = 64.7 bits (156), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 64/197 (32%), Positives = 92/197 (46%), Gaps = 17/197 (8%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPR---DLRVKYWLSNDYGERFSISRQ-GDISLM 100
            FS + Y+    EN     +L  V    P    + +V Y LS+     FS+ R  G I L 
Sbjct: 3132 FSSDHYTACVYENTATKALLTRVQATDPDVGVNRKVTYSLSDSADGYFSVDRSSGIIILE 3191

Query: 101  QCLDYETEDSYRFTVYATDT----LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
              LD E + SY  TV A+D      +++ ATV I+V+++ND  P F    Y + +P    
Sbjct: 3192 HPLDRELQSSYNITVKASDQSIVLTLSSFATVTITVLDINDNPPVFERRDYLVTVPE--- 3248

Query: 157  ADLTPGSVIGKVEAADGDKGDRVTLS--LRGPYEK-MFSIND-SGHISIVD-LSALNTST 211
             D +PG+ +  V A   D G    ++  +R   EK  F IN  +G ISI++ L   +   
Sbjct: 3249 -DTSPGTEVLSVFATSQDIGTNAEIAYLIRSGNEKGKFRINSKTGVISIIEALDFESCKD 3307

Query: 212  IQLVVVATDTGNPPRQA 228
              LVV A D G P   A
Sbjct: 3308 FYLVVEAKDGGTPALSA 3324



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 64/199 (32%), Positives = 92/199 (46%), Gaps = 25/199 (12%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDL----RVKYWLSNDYGERFSISR-QGDISL 99
            F  + Y+V  LE+LPV  V+  + T+ P DL    +V+Y L NDY  RF I +  G I L
Sbjct: 937  FIPSSYNVKVLEDLPVGTVIAWLETHDP-DLGLGGQVRYSLVNDYNGRFEIDKASGAIRL 995

Query: 100  MQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIP---- 155
             + LDYE +  Y  TV A D          +S+ +++  +         L+ P+ P    
Sbjct: 996  NKELDYEKQQFYNLTVRAKDKGRP------VSLSSLSFVEVEVVDVNENLYTPYFPDFAV 1049

Query: 156  LADLTPGSVIG----KVEAADGDKG--DRVTLSLR-GPYEKMFSIN-DSGHISIVD-LSA 206
            +  +   S IG    +V A D D G    +  S+R G     FSI+ ++G I   D L  
Sbjct: 1050 IGSVKENSRIGTSVLQVVARDEDSGRDGEIQYSIRDGSGLGRFSIDEETGVIYTADVLDR 1109

Query: 207  LNTSTIQLVVVATDTGNPP 225
              T +  L V ATD G  P
Sbjct: 1110 ETTKSYWLTVYATDHGVVP 1128



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 43/137 (31%), Positives = 61/137 (44%), Gaps = 8/137 (5%)

Query: 103  LDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPG 162
            LD E +D Y   + ATD L  T A V ++V +VND +P      Y    P     D+ P 
Sbjct: 2991 LDREEQDIYYLNITATDGLFVTQAAVEVTVTDVNDNNPVCEQVAYTALFPE----DIPPN 3046

Query: 163  SVIGKVEAADGDKGD--RVTLSLRGPYEKMFSIN-DSGHI-SIVDLSALNTSTIQLVVVA 218
             VI K+ A D D G    +  SL G     F ++ ++G + S+  L         LV  A
Sbjct: 3047 KVILKISAKDADIGSNGEIRYSLYGSGNNKFFLDPENGELKSLAPLDREKIPAYNLVARA 3106

Query: 219  TDTGNPPRQASVPAIMH 235
            TD G    Q+ +  I+ 
Sbjct: 3107 TDGGGRFCQSEIHLILE 3123



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 70/231 (30%), Positives = 104/231 (45%), Gaps = 27/231 (11%)

Query: 27   ALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLR--VKYWLSND 84
            A+ T++V +A  S   L F++N YS S  EN   N   + V       L   +KY + N 
Sbjct: 1967 AMVTIMVKEAMDS--GLHFTQNFYSTSISEN-STNITKIAVVNAVGNRLNEPLKYSILNP 2023

Query: 85   YGERFSI-SRQGDISLMQC-LDYETEDSYRFTVYAT---DTLMTTSATVNISVVNVNDWD 139
             G +F I S  G I       D E ++ Y   V A+   D L      V + + ++ND  
Sbjct: 2024 -GNKFKIKSTSGVIQTTGIPFDREEQELYELVVEASRELDHLRVARVVVRVYIEDINDNA 2082

Query: 140  PRFRYPQYELFLPHIPLA--DLTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSIND 195
            P F      + LP+      D  PG++I +V A D DKGD   V+  LR  Y        
Sbjct: 2083 PVF------VGLPYYAAVQVDAEPGTLIYRVTAIDKDKGDNGEVSYLLREDYGHFEIDRG 2136

Query: 196  SGHISIVDLSALNTSTIQ--LVVVATDTGNPPRQASVPAIMHFPEAIVQQA 244
            SG I++ +    + S I+  +V++A D G+P   AS+      P  IV +A
Sbjct: 2137 SGSITLKEAFNSDLSNIEYLVVILAKDGGSPSLSASI----ELPITIVNKA 2183



 Score = 46.6 bits (109), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 57/202 (28%), Positives = 90/202 (44%), Gaps = 25/202 (12%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWL-SNDYGERFSIS-RQGDISLMQC 102
            F K  Y+ S  E++ ++  +L++    P    + Y +   D   +F+I    G +S++  
Sbjct: 2187 FDKPFYTASVNEDVEMHVPILSINATSPEGQGIIYIIVDGDPYNQFNIDFDTGVLSVISP 2246

Query: 103  LDYETEDSYRFTVYATDTLMTTSA--TVNISVVNVNDWDPRFRYPQYELFLPHIPLADLT 160
            LDYE    ++  V A+D+L    A  TV++ V +VND  P F    Y         A L+
Sbjct: 2247 LDYEINSLFKLMVRASDSLTGARAEVTVDLIVNDVNDNPPVFDQSAYN--------ATLS 2298

Query: 161  PGSVIG----KVEAADGDKGDRVTLSLRGPYEKMFSINDSGHIS-----IVDLSALNTST 211
              S+IG    +V A D D  +   +  +   +  F+  D  HI      I+    L+   
Sbjct: 2299 EASLIGTPVLQVVATDADSDNNKIVQYQ-IVQDTFNSTDYFHIDSSSGLILTARMLDHEL 2357

Query: 212  IQ---LVVVATDTGNPPRQASV 230
            IQ   L V ATD G PP  + V
Sbjct: 2358 IQQCSLKVRATDNGFPPMSSEV 2379



 Score = 44.7 bits (104), Expect = 0.074,   Method: Compositional matrix adjust.
 Identities = 36/144 (25%), Positives = 71/144 (49%), Gaps = 7/144 (4%)

Query: 43   LQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKY-WLSNDYGERFSISRQ-GDISLM 100
            L F +  Y+ + +E+  V  ++  V+  +P ++ + +  +  +Y   F + +  G I + 
Sbjct: 1361 LTFDEPFYNFTIMESDKVTEIVGVVSV-QPSNIPLWFDIVGGNYDSSFDVYKGVGTIVIA 1419

Query: 101  QCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLT 160
            + LD E    Y  TV  TD     +A V I V++ ND  P F  P Y++ +      D+ 
Sbjct: 1420 KPLDAEQRSMYNMTVEVTDGTNIATAQVLIKVLDNNDNGPEFSQPSYDVTISE----DIL 1475

Query: 161  PGSVIGKVEAADGDKGDRVTLSLR 184
            P + I ++EA D D+  +++ ++ 
Sbjct: 1476 PDTEILQIEAIDRDEKHKLSYTIH 1499



 Score = 43.9 bits (102), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 52/203 (25%), Positives = 90/203 (44%), Gaps = 21/203 (10%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGERFSIS-RQGDISLMQC 102
            +F+  EY     EN+ +   +++++      L  +    N  G  F+I+   G I+  + 
Sbjct: 1671 KFTLKEYQAEVNENVDIGTSVISLSAISQSTLVYEVKDGNVDG-VFTINPYSGVITSQKA 1729

Query: 103  LDYETEDSYRFTVYATDTL-MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTP 161
            LDYE   SY+  V AT+   M ++ATVNI +V+ ND  P F + +Y        +++  P
Sbjct: 1730 LDYEHASSYQLIVQATNMAGMASNATVNIQIVDENDNPPVFLFSEYSG-----SISEAAP 1784

Query: 162  GSVIGK--------VEAADGDKGDRVTLS---LRGPYEKMFSINDS-GHI-SIVDLSALN 208
             + + +        + A D D      L    +    +K F+++ S G I +I +L    
Sbjct: 1785 VNSVVRSANNSPLVIRATDADSNQNALLVYQIVESTAKKYFTVDSSTGAIRTIANLDHET 1844

Query: 209  TSTIQLVVVATDTGNPPRQASVP 231
             +     V   D+GNP   A  P
Sbjct: 1845 IARFHFHVHVRDSGNPQLTAESP 1867



 Score = 41.6 bits (96), Expect = 0.62,   Method: Compositional matrix adjust.
 Identities = 55/200 (27%), Positives = 91/200 (45%), Gaps = 19/200 (9%)

Query: 45   FSKNEYSVSALENL-PVNYVLLTVTTNKP--RDLRVKYWL--SNDYGERFSI-SRQGDIS 98
            F + +Y V+  E+  P   VL    T++    +  + Y +   N+ G +F I S+ G IS
Sbjct: 3237 FERRDYLVTVPEDTSPGTEVLSVFATSQDIGTNAEIAYLIRSGNEKG-KFRINSKTGVIS 3295

Query: 99   LMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIP 155
            +++ LD+E+   +   V A D     ++   TVN++V +VND  P F    Y   +    
Sbjct: 3296 IIEALDFESCKDFYLVVEAKDGGTPALSAVTTVNVNVTDVNDNAPTFSQAVYSAVISE-- 3353

Query: 156  LADLTPGSVIGKVEAADGDK--GDRVTLSL-RGPYEKMFSINDS-GHISI-VDLSALNTS 210
              D   G  +  + A D D     ++  S+  G  +  FS++   G + +   L     S
Sbjct: 3354 --DAAVGDSVVMLIAEDLDSPPNGQIHFSIVNGDQDNEFSVDPVLGLVKVKKKLDRERIS 3411

Query: 211  TIQLVVVATDTGNPPRQASV 230
               LVV A D+G PP  +SV
Sbjct: 3412 GYSLVVQARDSGTPPLSSSV 3431



 Score = 41.6 bits (96), Expect = 0.63,   Method: Compositional matrix adjust.
 Identities = 37/146 (25%), Positives = 69/146 (47%), Gaps = 17/146 (11%)

Query: 45   FSKNEYSVSALENLPVNYVLL---TVTTNKPRDLRVKYWLS-----NDYGERFSI-SRQG 95
            F    Y    +E +P+   L+    V  +   + +V Y L          E F+I S  G
Sbjct: 2815 FEAANYDAVIMEGMPIGTKLMQVKAVDADSSANGQVTYTLEVESELQKITEAFTIDSNSG 2874

Query: 96   DISLMQCLDYETEDSYRFTVYATD----TLMTTSATVNISVVNVNDWDPRFRYPQYELFL 151
             IS ++ LD+E + ++ F V A+D      ++++  V+++V ++ND  P F   ++E++ 
Sbjct: 2875 WISTLKDLDHEKDSAFTFAVVASDLGEALSLSSTTLVSVTVTDINDNAPVF---EHEVYR 2931

Query: 152  PHIPLADLTPGSVIGKVEAADGDKGD 177
              +  +D  PG V+  +   D D  D
Sbjct: 2932 GSVKESD-PPGEVVAVLSTWDEDTSD 2956



 Score = 41.2 bits (95), Expect = 0.97,   Method: Compositional matrix adjust.
 Identities = 45/130 (34%), Positives = 60/130 (46%), Gaps = 12/130 (9%)

Query: 73   RDLRVKYWLSNDYG-ERFSISRQ-GDISLMQCLDYETEDSYRFTVYATD---TLMTTSAT 127
            RD  ++Y + +  G  RFSI  + G I     LD ET  SY  TVYATD     + T+  
Sbjct: 1075 RDGEIQYSIRDGSGLGRFSIDEETGVIYTADVLDRETTKSYWLTVYATDHGVVPLYTTME 1134

Query: 128  VNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR--- 184
            V I V +VND  P    P   ++ P I        SVI +++A D D      L+ R   
Sbjct: 1135 VYIEVEDVNDNAPLTSEP---IYYPVIMENSPKDVSVI-QIQAQDPDSSTNEKLTYRITS 1190

Query: 185  GPYEKMFSIN 194
            G  +  F IN
Sbjct: 1191 GNPQNFFVIN 1200



 Score = 38.5 bits (88), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 34/129 (26%), Positives = 61/129 (47%), Gaps = 9/129 (6%)

Query: 76   RVKYWL--SNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVV 133
            R++Y +   ND       S+ G I+L        E  Y   V  +D L T++A V+I ++
Sbjct: 2429 RLEYSILSGNDRTSFIMDSKSGVITLSNHRKQRMEPMYSLNVSVSDGLFTSTAQVHIQIL 2488

Query: 134  NVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEK-M 190
              N + P F      +++  +   +  PG+ +  V+A DGD G   +++ S+   + K  
Sbjct: 2489 GANLYSPVF---SQSIYVAEV-RENAAPGTKVIHVKATDGDSGVYGQISYSIINDFAKDR 2544

Query: 191  FSINDSGHI 199
            F I+ +G I
Sbjct: 2545 FLIDANGQI 2553


>gi|348552360|ref|XP_003461996.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 1 [Cavia
           porcellus]
          Length = 3172

 Score = 64.7 bits (156), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 62/229 (27%), Positives = 107/229 (46%), Gaps = 22/229 (9%)

Query: 13  LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTT--- 69
           L V A+ + +  R A   L V+ + T+     F ++EY     ENL V Y +LT+     
Sbjct: 485 LKVSAVDHGSPRRSAATYLTVTVSDTNDHSPVFEQSEYRERVRENLEVGYEVLTIRATDG 544

Query: 70  NKPRDLRVKYWLSNDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDT-----LMT 123
           + P +  ++Y L    G  F I +R G +     +D E +  Y+  V A D       ++
Sbjct: 545 DAPSNANMRYRLLEGSGGVFEIDARSGVVRTRAVVDREEQAEYQLLVEANDQGRNPGPLS 604

Query: 124 TSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS- 182
            +ATV+I V + ND  P+F   +Y + +P     DL   + + +V+A D D+G    +  
Sbjct: 605 ATATVHILVEDENDNYPQFSEKRYVVQVPE----DLAVNTPVLRVQATDRDQGQNAAIHY 660

Query: 183 --LRGPYEKMFSIND-SGHISIV---DLSALNTSTIQLVVVATDTGNPP 225
             + G  +  F ++  SG + ++   D  A+   T++  + A D G PP
Sbjct: 661 SIVSGNLKGQFYLHSLSGSLDVINPLDFEAIREYTLR--IKAQDGGRPP 707



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 46/166 (27%), Positives = 71/166 (42%), Gaps = 29/166 (17%)

Query: 45  FSKNEYSVSALENLPVNYVLL---TVTTNKPRDLRVKYWLSNDYGERFSISRQGD----- 96
           F  + +  + LEN+P+ + +L    V  +   + R+ Y L +       +   G      
Sbjct: 729 FVSSPFQATVLENVPLGHSVLHIQAVDADSGENARLSYRLVDTGSAAVGVGSAGPEDPDS 788

Query: 97  --------------ISLMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWD 139
                         I++   LD E  + Y F V A D     M++SA+V+I+V++VND D
Sbjct: 789 TPDFPFQIHNSSGWITVCAELDREAVEHYSFGVEAVDHGSPPMSSSASVSITVLDVNDND 848

Query: 140 PRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRG 185
           P F  P YEL L      D   GS +  + A D D    +T  L G
Sbjct: 849 PVFTQPLYELRLNE----DAAVGSSVLTLRARDRDANSVITYQLTG 890



 Score = 47.8 bits (112), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 52/189 (27%), Positives = 86/189 (45%), Gaps = 14/189 (7%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDLR--VKYWLSN-DYGERFSISRQ---GDIS 98
            F++  Y +   E+  V   +LT+   + RD    + Y L+  +   RF++S Q   G I+
Sbjct: 851  FTQPLYELRLNEDAAVGSSVLTLRA-RDRDANSVITYQLTGGNTRNRFALSSQSGGGLIT 909

Query: 99   LMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLAD 158
            L   LDY+ E  Y   V A+D   + +  V I+V + N   P F+   Y + +      D
Sbjct: 910  LALPLDYKQERQYVLAVTASDGTRSHTVQVFINVTDANTHRPVFQSSHYTVSVSE----D 965

Query: 159  LTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSINDSGHI-SIVDLSALNTSTIQLV 215
               G+ I  + A D D G+  R+T  L  P  +     D+G I ++ +L   + +   L 
Sbjct: 966  RPVGTPIATISATDEDTGENARITYVLEDPVPQFRIDPDTGTIYTMTELDYEDQAAYTLA 1025

Query: 216  VVATDTGNP 224
            + A D G P
Sbjct: 1026 ITARDNGIP 1034



 Score = 46.6 bits (109), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 40/149 (26%), Positives = 69/149 (46%), Gaps = 10/149 (6%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWL-SNDYGERFSISR-QGDISL 99
            F ++E  +   EN PV  V+  +  N P +    ++ Y +   +  E F +    GD+  
Sbjct: 1163 FERDELELFVEENSPVGSVVAKIHANDPDEGPNAQIMYQIVEGNVPEVFQLDLLSGDLRA 1222

Query: 100  MQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPH--IPLA 157
            +  LD+E    Y   V AT   + + ATV I +++ ND  P    P +++   +     +
Sbjct: 1223 LAELDFEVRRDYMLVVQATSAPLVSRATVRIHLLDQNDNPPEL--PDFQILFNNYVTNKS 1280

Query: 158  DLTPGSVIGKVEAADGDKGDRVTLS-LRG 185
            +  P  VIG++ A D D  D +  + LRG
Sbjct: 1281 NSFPSGVIGRIPAHDPDLSDSLNYTFLRG 1309



 Score = 42.4 bits (98), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 54/209 (25%), Positives = 88/209 (42%), Gaps = 23/209 (11%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTTNKPRDL---RVKYWLSNDYGER----FSI-SRQG 95
           QF    Y VS  EN P    ++ +  + P +    R+ Y +   + ER    F I    G
Sbjct: 408 QFPLPSYQVSVPENQPAGTTVIELVAHDPDEGEAGRLSYQMEALFDERSNGYFLIDGATG 467

Query: 96  DISLMQCLDYETEDSYRFTVYATD--TLMTTSAT-VNISVVNVNDWDPRFRYPQYELFLP 152
            +S  + LD ET+D++   V A D  +   ++AT + ++V + ND  P F   +Y   + 
Sbjct: 468 TVSTARELDRETKDTHVLKVSAVDHGSPRRSAATYLTVTVSDTNDHSPVFEQSEYRERV- 526

Query: 153 HIPLADLTPGSVIGKVEAADGDKGDRVTLSLR--GPYEKMFSINDSGHI----SIVDLSA 206
                +L  G  +  + A DGD      +  R       +F I+    +    ++VD   
Sbjct: 527 ---RENLEVGYEVLTIRATDGDAPSNANMRYRLLEGSGGVFEIDARSGVVRTRAVVDRE- 582

Query: 207 LNTSTIQLVVVATDTGNPPRQASVPAIMH 235
              +  QL+V A D G  P   S  A +H
Sbjct: 583 -EQAEYQLLVEANDQGRNPGPLSATATVH 610


>gi|170037432|ref|XP_001846562.1| protocadherin-15 [Culex quinquefasciatus]
 gi|167880555|gb|EDS43938.1| protocadherin-15 [Culex quinquefasciatus]
          Length = 1631

 Score = 64.7 bits (156), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 62/197 (31%), Positives = 93/197 (47%), Gaps = 12/197 (6%)

Query: 37  GTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLS--NDYGERFSISRQ 94
           G + +  +F K  Y V   E   +N  ++ V    P    VKY ++  ND   +FSI ++
Sbjct: 505 GPNTKPPRFVKPVYDVQVSEGAEINSTVIVVKAEDPESDPVKYAITTGNDL-RQFSIGKE 563

Query: 95  -GDISLMQCLDYETEDSYRFTVYATDTL-MTTSATVNISVVNVNDWDPRFRYPQYELFLP 152
            G IS+++ LD E    Y+  + A D   + +SATVNI V ++ND +P F     E  LP
Sbjct: 564 SGVISVIRKLDREDLTRYQLIIRAEDNGGLASSATVNIKVTDINDKNPEFD----ENNLP 619

Query: 153 HIPLADLTPGSV-IGKVEAADGDKGDRVTLSLRGPYEKMFSIND-SGHI-SIVDLSALNT 209
           ++   D    +V IG V A D D+G    ++   P +  F IN  +G I +   L     
Sbjct: 620 YVFSVDEGKDNVVIGTVRATDADEGMNAEITYTIPSDIPFKINSRTGEIRTKSQLDYEKQ 679

Query: 210 STIQLVVVATDTGNPPR 226
              + VV A D    PR
Sbjct: 680 KEYKFVVTAQDGAPEPR 696



 Score = 44.7 bits (104), Expect = 0.071,   Method: Compositional matrix adjust.
 Identities = 36/107 (33%), Positives = 51/107 (47%), Gaps = 10/107 (9%)

Query: 92  SRQGDISLMQCLDYETEDSYRFTVYATDTL---MTTSATVNISVVNVNDWDPRFRYPQYE 148
           SR G+I     LDYE +  Y+F V A D        +A+V + V +V D  PRF     E
Sbjct: 663 SRTGEIRTKSQLDYEKQKEYKFVVTAQDGAPEPRLGTASVTVKVRDVPDEVPRFMESVIE 722

Query: 149 LFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSL-RGPYEKMFSIN 194
           + +P     +  P   +  V A D D    +T SL RGP + +F I+
Sbjct: 723 VKIP-----ENVPDMAVTTVRAFDPDTKPEITYSLKRGPGD-LFKID 763



 Score = 38.5 bits (88), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 73/269 (27%), Positives = 109/269 (40%), Gaps = 51/269 (18%)

Query: 58  LPVNYVLLTVTTNKPRDLRVK----YWLSNDYGERFSI-SRQGDISLMQCLDYETEDSYR 112
           +P N   + VTT +  D   K    Y L    G+ F I ++ G I  ++ LDYE +  + 
Sbjct: 725 IPENVPDMAVTTVRAFDPDTKPEITYSLKRGPGDLFKIDAKTGLIKTIRGLDYEKDKIHE 784

Query: 113 FTVYATDTLMTTSA---TVNISVVNVNDWDPRFRYPQYELFLPHIPLA---DLTPGSVIG 166
             V   +   T       V + V + ND  P F      + +P  P+    DL  G+++G
Sbjct: 785 LIVGTLENNGTNPGDYIKVMVEVEDRNDIPPVF------VSIPE-PININDDLPIGAIVG 837

Query: 167 KVEAADGDKGD-----RVTLSLRGPYEKMFSIN-DSGHISIVDLSALNTSTIQLV-VVAT 219
            + A DGD        R  +  RG   K F ++ DSG + I D       T  LV V A 
Sbjct: 838 SMPAVDGDGSSPGNVVRYEMVGRGKALKYFQVDPDSGIVRIRDELNKEDDTEYLVDVRAY 897

Query: 220 DTGNPPRQ--ASVPA-IMHFP-EAIVQQASSKLNSGTSSTVLIILGVVLIVLGF------ 269
           D G P     A++P  + H P       A S++++G       I+ + +  L F      
Sbjct: 898 DMGEPQLSSVATLPIYVSHIPANPNGDSAESRVDAGG------IVNLEVQGLAFSDDSYT 951

Query: 270 ----------VIILLILYIHKNKHTKNNG 288
                       I LI  I+  K TK+NG
Sbjct: 952 TSVPESTGMNATIKLIQIINSKKATKHNG 980


>gi|328782343|ref|XP_392736.4| PREDICTED: cadherin-87A-like [Apis mellifera]
          Length = 1904

 Score = 64.7 bits (156), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 72/243 (29%), Positives = 106/243 (43%), Gaps = 46/243 (18%)

Query: 11  ITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTN 70
           I LVV    + +    + AT+ VS    +     FS   Y+   LE  P    ++T+T  
Sbjct: 479 IILVVAEEVHTDPKLSSTATVTVSITDANDNSPTFSNPTYTAVVLETAPPGTPVITITA- 537

Query: 71  KPRD------LRVKYWLSNDYGERFSISRQGDISLMQ---------CLDYETEDSYRFTV 115
           K RD        + Y L     + FS+ R+  I  +          CLDYE +  Y  T 
Sbjct: 538 KDRDSGRFGTAGIAYQLLGQGAQHFSVDRKSGIITVAPCANPGTSPCLDYEEQTEYFLTY 597

Query: 116 YATD---TLMTTSATVNISVVNVNDWDPRFRYPQY--------ELFLPHIPLADLTPGSV 164
            ATD      TTS ++ IS+ + ND  PRF   +Y        E F P +          
Sbjct: 598 KATDDDGQGQTTSVSLRISLSDANDSPPRFLQDKYRAVIDEGAEKFEPDL---------- 647

Query: 165 IGKVEAADGDKGDRVTLSLRGPYE-KMFSIN-DSGHISI-----VDLSALNTSTIQLVVV 217
             KV+A D DK  ++T ++ G  E  +F+I+ D+G I+I     VDL+      I LV+ 
Sbjct: 648 --KVQARDKDKTSKITYAIVGGDELDLFAIDQDTGEITIKNKGPVDLTNSTHDWIALVIQ 705

Query: 218 ATD 220
           A+D
Sbjct: 706 ASD 708



 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 46/153 (30%), Positives = 81/153 (52%), Gaps = 15/153 (9%)

Query: 95   GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFL 151
            G +   Q +DYE      FTV A D+    ++ +  V ++V+N+ND DP+F   + EL+ 
Sbjct: 1012 GIVRTSQVIDYEETKQLEFTVVAYDSGVPQLSATTKVIVTVININDQDPKF---EKELYN 1068

Query: 152  PHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSI-NDSGHISIVDLSALN 208
              +   +  PG+ +  V+A DGD+G    V+ SL G +   F+I +++G I++   + L+
Sbjct: 1069 ASVK-ENSPPGTHVIVVKATDGDEGPFGEVSYSLIGDHAADFNIGHETGEITVGSAAVLD 1127

Query: 209  ---TSTIQLVVVATDTG--NPPRQASVPAIMHF 236
               T  I + V+A+D    N  R  +VP ++  
Sbjct: 1128 REITPNITITVMASDGAHINSRRSTTVPVVVKL 1160



 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 47/152 (30%), Positives = 72/152 (47%), Gaps = 17/152 (11%)

Query: 79  YWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDW 138
           + +  D GE  +I  +G + L       T D     + A+D +   SA VNI++ +VN+ 
Sbjct: 673 FAIDQDTGE-ITIKNKGPVDLTNS----THDWIALVIQASDGIFVDSAIVNITIRDVNNN 727

Query: 139 DPRFRYPQYELFLPHI-PLADLTPGSVIGKVEAADGDKGDRVTLSLR---GPYEKMFSIN 194
            P F +  Y   LP I P+     G+V+ +V A D D G    L  R   G ++  F+IN
Sbjct: 728 APVFPHELYTASLPEISPI-----GTVVEEVTATDADTGINAELVYRIQKGAFDD-FTIN 781

Query: 195 DSGHISIV--DLSALNTSTIQLVVVATDTGNP 224
           ++  I  V   L   N +T  + V+A D G P
Sbjct: 782 ETTGIVTVFRKLDYDNKNTYHVEVIAFDKGTP 813



 Score = 41.2 bits (95), Expect = 0.94,   Method: Compositional matrix adjust.
 Identities = 54/199 (27%), Positives = 84/199 (42%), Gaps = 19/199 (9%)

Query: 45   FSKNEYSVSALENLPVN---YVLLTVTTNKPRDLRVKYWLSNDYG---ERFSISRQGDIS 98
            F+++ Y  S  ENLPVN    +L     +    +  + W +  +G   E FS++ +  I 
Sbjct: 1170 FTQHSYRASVAENLPVNPPAPILQVRAVDHDEGINGEVWYTIIHGNENESFSLNHETGIL 1229

Query: 99   LMQCLDYETEDSYRFTVYATDTL----MTTSATVNISVVNVNDWDPRFRYPQYELFLPHI 154
                       SYR  V A D       +    V+I V  VN   P+F  P+       +
Sbjct: 1230 YPGAALLGRAGSYRIEVEARDGAGNGPHSDKCYVDIRVTPVNQHKPQFVLPELTNATVEV 1289

Query: 155  PLADLTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKM-----FSIN-DSGHI-SIVDLS 205
            P        +I  V+A D D G+  RV+  L+     +     FSI+ ++G + S + L 
Sbjct: 1290 PENTGVLNYLILTVKAIDRDPGENGRVSYHLKVGNRNIQETEEFSIDQETGELRSKIILD 1349

Query: 206  ALNTSTIQLVVVATDTGNP 224
                S  +LV+VA D G P
Sbjct: 1350 REVKSKFELVLVAADHGTP 1368



 Score = 39.3 bits (90), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 60/275 (21%), Positives = 109/275 (39%), Gaps = 61/275 (22%)

Query: 11   ITLVVRAIQYDNQDRYALATLIVSKAGTSL---------------RELQFSKNEYSVSAL 55
            I  V R + YDN++ Y +  +   K   SL               +   F+         
Sbjct: 786  IVTVFRKLDYDNKNTYHVEVIAFDKGTPSLTGTTTLMINVENSNDKAPYFTPETQRAEVT 845

Query: 56   ENLPVNYVLLTVTTNKPRDLRVK---YWLS-------------ND---YGERFSISRQ-G 95
            E+ P+  V  T+    P    V+   + +S             ND   + + F++ R  G
Sbjct: 846  EDTPIGTVFTTLKATDPDSTNVEALNFAISEPITAIDRNGQQVNDSKSFKDFFAVDRATG 905

Query: 96   DISLMQCLDYETEDSYRFTVYATDT----LMTTSATVNISVVNVNDWDPRFRYP---QYE 148
             +S+++ LD +   +   TV  +DT    L     T+ +++++VN   P F  P   +  
Sbjct: 906  QVSVVRSLDRDIAATVSITVVVSDTTAPTLQQGRGTLVVTIIDVNHMAPEFLKPWTRENP 965

Query: 149  LFLPHIPLADLTP-GSVIGKVEAADGDKGDRVTLSLRG----PYEKMFSINDSGHI---- 199
             +L  I + +  P G+++G   A D D       ++ G    P    F+I++   I    
Sbjct: 966  RYL--IEMQEEQPTGAIVGAFTAVDADS------NIAGYAIIPPSPYFNIDNVTGIVRTS 1017

Query: 200  SIVDLSALNTSTIQLVVVATDTGNPPRQASVPAIM 234
             ++D     T  ++  VVA D+G P   A+   I+
Sbjct: 1018 QVIDYE--ETKQLEFTVVAYDSGVPQLSATTKVIV 1050



 Score = 39.3 bits (90), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 33/120 (27%), Positives = 54/120 (45%), Gaps = 15/120 (12%)

Query: 102 CLDYETEDSYRFTVYA------TDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIP 155
            LDYE  +  +F +        TD  ++++ATV +S+ + ND  P F  P Y   +    
Sbjct: 467 SLDYENPNQRKFIILVVAEEVHTDPKLSSTATVTVSITDANDNSPTFSNPTYTAVV---- 522

Query: 156 LADLTPGSVIGKVEAADGDKGD----RVTLSLRGPYEKMFSIN-DSGHISIVDLSALNTS 210
           L    PG+ +  + A D D G      +   L G   + FS++  SG I++   +   TS
Sbjct: 523 LETAPPGTPVITITAKDRDSGRFGTAGIAYQLLGQGAQHFSVDRKSGIITVAPCANPGTS 582


>gi|61870088|ref|XP_588576.1| PREDICTED: protocadherin gamma-A5 [Bos taurus]
 gi|297477337|ref|XP_002689282.1| PREDICTED: protocadherin gamma-A5 [Bos taurus]
 gi|296485249|tpg|DAA27364.1| TPA: protocadherin gamma subfamily A, 5 [Bos taurus]
          Length = 814

 Score = 64.7 bits (156), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 63/197 (31%), Positives = 88/197 (44%), Gaps = 23/197 (11%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWLSND---YGERFSI-SRQGDI 97
           F++ EY VS  EN+ V   LLTVT   P +    ++ Y   N+     E F + S  G+I
Sbjct: 242 FTQPEYRVSVPENIAVGTRLLTVTATDPDEGINGKLTYSFRNEEEKISETFQLESNLGEI 301

Query: 98  SLMQCLDYETEDSYRFTVYATD-TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
           S +Q LDYE    Y   V A D   +  SA V I+V +VND  P       E+ L  +  
Sbjct: 302 STVQPLDYEESRFYNMEVVAQDGGALLASAKVLITVQDVNDNAP-------EVLLTSLSS 354

Query: 157 A---DLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDS--GHISIVDLSALNTST 211
               D  PG++I      DGD G+   +    P    F +  S   +  ++   AL+   
Sbjct: 355 TVSEDCLPGTIIALFSVHDGDSGENGEIVCSIPRNLPFKLEKSVDNYYHLLTTRALDREE 414

Query: 212 I---QLVVVATDTGNPP 225
           I    + V  TD GNPP
Sbjct: 415 ISDYNITVTVTDCGNPP 431



 Score = 40.4 bits (93), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 53/214 (24%), Positives = 93/214 (43%), Gaps = 35/214 (16%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKP---RDLRVKYWLSNDYGERFSISR-------Q 94
           F    Y     EN P    + +V  + P    + +V Y L+ D  +   +S         
Sbjct: 452 FLHTSYYTYIPENNPRGISIFSVNAHDPDSGNNAQVTYALAEDKFQGTPLSSYVSINSDT 511

Query: 95  GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFL 151
           G +  ++  DYE     +  V A+D     ++++ ++++ +++ ND  P   YP     L
Sbjct: 512 GALYALRSFDYEQVRELQLWVTASDNGDPPLSSNVSLSLFILDQNDNAPEILYPA----L 567

Query: 152 P-----HIPLADLT--PGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-DSGHI- 199
           P      + LA  +  PG ++ KV A D D G    LS   L+     +F++   +G + 
Sbjct: 568 PIDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKASEPGLFTVGLHTGEVR 627

Query: 200 ---SIVDLSALNTSTIQLVVVATDTGNPPRQASV 230
              +++D  A+  +   LVVV  D G PP  A+V
Sbjct: 628 TARALLDRDAIKQN---LVVVVQDHGQPPLSATV 658



 Score = 38.5 bits (88), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 64/143 (44%), Gaps = 17/143 (11%)

Query: 101 QCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLA 157
           + LD E    Y  TV  TD     ++T   + + V ++ND  P F +  Y  ++P     
Sbjct: 408 RALDREEISDYNITVTVTDCGNPPLSTENHIFLKVADINDNPPIFLHTSYYTYIPE---- 463

Query: 158 DLTPGSVIGKVEAADGDKGD--RVTLSLRG------PYEKMFSIN-DSGHI-SIVDLSAL 207
           +   G  I  V A D D G+  +VT +L        P     SIN D+G + ++      
Sbjct: 464 NNPRGISIFSVNAHDPDSGNNAQVTYALAEDKFQGTPLSSYVSINSDTGALYALRSFDYE 523

Query: 208 NTSTIQLVVVATDTGNPPRQASV 230
               +QL V A+D G+PP  ++V
Sbjct: 524 QVRELQLWVTASDNGDPPLSSNV 546


>gi|149043790|gb|EDL97241.1| rCG60633 [Rattus norvegicus]
          Length = 1351

 Score = 64.7 bits (156), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 62/195 (31%), Positives = 99/195 (50%), Gaps = 14/195 (7%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGER-FSISRQ-GDISLMQ 101
           +F +  YS+   E + +  VLL +         + Y + N   +R F++S   G +SL +
Sbjct: 33  RFPQLMYSLEVSEAMRIGAVLLNLQATDREGDPITYAIENGDPQRVFNLSETTGILSLGK 92

Query: 102 CLDYETEDSYRFTVYATDTL--MTTSATVNISVVNVNDWDPRFRYPQYELFLP-HIPLAD 158
            LD E+ D Y   V A+D     T++ATVNI V +VND  P F     + +LP ++ + +
Sbjct: 93  ALDRESTDRYILIVTASDGRPDGTSTATVNIVVTDVNDNAPVF-----DPYLPRNLSVVE 147

Query: 159 LTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDSGHI-SIVDLSALNTSTIQLV 215
               + +G+V A D D G   +V  SL G +  +F I  +G I + V L+       +LV
Sbjct: 148 EEANAFVGQVRATDPDAGINGQVHYSL-GNFNNLFRITSNGSIYTAVKLNREARDHYELV 206

Query: 216 VVATDTGNPPRQASV 230
           VVATD    PR +++
Sbjct: 207 VVATDGAVHPRHSTL 221



 Score = 51.2 bits (121), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 65/201 (32%), Positives = 94/201 (46%), Gaps = 26/201 (12%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRDL--RVKYWL-SNDYGERFSISR-QGDISLM 100
           F+ + Y+V   ENLP     L +   K  DL   V Y + S +    F++    G++SL+
Sbjct: 237 FTNSTYTVVVEENLPAGTAFLQIEA-KDVDLGANVSYRIRSPEVKHLFALHPFTGELSLL 295

Query: 101 QCLDYET----EDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
           + LDYE     E S  F V A D   T+    ATV + V ++ND+ P F    Y+  +  
Sbjct: 296 RSLDYEAFPDQEASITFLVEAFDIYGTMPPGIATVTVIVKDMNDYPPVFSKRIYKGMV-- 353

Query: 154 IPLADLTPGSVIGKVEAADGDK----GDRVTLSL---RGPY-EKMFSIN-DSGH-ISIVD 203
               D   G+ I  V A D D       RV   +   + PY   +F +  DSG  I+ V+
Sbjct: 354 --APDAVKGTPITTVYAEDADPPGLPASRVRYRVDDVQFPYPASIFDVEEDSGRVITRVN 411

Query: 204 LSALNTSTIQLVVVATDTGNP 224
           L+   T+  +LVVVA D G P
Sbjct: 412 LNEEPTTIFKLVVVAFDDGEP 432


>gi|148700221|gb|EDL32168.1| cadherin 23 (otocadherin), isoform CRA_b [Mus musculus]
          Length = 1951

 Score = 64.7 bits (156), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 60/195 (30%), Positives = 92/195 (47%), Gaps = 20/195 (10%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWLSNDYGERFSIS-RQGDISLM 100
            F +  Y  +  E++ V  V+L VT           ++Y L +  G +F+I+   GDIS++
Sbjct: 999  FDQPSYQEAVFEDIAVGTVILRVTATDADSGNFALIEYSLVDGEG-KFAINPNTGDISVL 1057

Query: 101  QCLDYETEDSYRFTVYATDT-------LMTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
              LD E +D Y  T  A D            S  V I V++VND  P+F  PQ+   +  
Sbjct: 1058 SSLDREKKDHYILTALAKDNPGDVASNRRENSVQVVIRVLDVNDCRPQFSKPQFSTSV-- 1115

Query: 154  IPLADLTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSIN-DSGHISIVDLSALNTS 210
                +   G+ +  + A D D+G   ++T SL GP  + FS++ DSG ++       +  
Sbjct: 1116 --YENEPAGTSVITMLATDQDEGSNSQLTYSLEGPGMEAFSVDMDSGLVT-TQRPLQSYE 1172

Query: 211  TIQLVVVATDTGNPP 225
               L VVATD G PP
Sbjct: 1173 RFNLTVVATDGGEPP 1187



 Score = 46.6 bits (109), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 45/142 (31%), Positives = 68/142 (47%), Gaps = 20/142 (14%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVT-TNKPRDL--RVKYWLSNDYGERFSIS------RQG 95
           FS   Y+V  LEN P  + +L VT T++   L   + Y +     +RF I       R G
Sbjct: 666 FSPPTYTVHLLENCPPGFSVLQVTATDEDSGLNGELVYRIEAGAQDRFLIHPVTGVIRVG 725

Query: 96  DISLMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLP 152
           + +    +D E ++SYR TV ATD     ++ +A V I + ++ND  P F  P   + + 
Sbjct: 726 NAT----IDREEQESYRLTVVATDRGTVPLSGTAIVTILIDDINDSRPEFLNPIQTVSV- 780

Query: 153 HIPLADLTPGSVIGKVEAADGD 174
              L    PG++I  V A D D
Sbjct: 781 ---LESAEPGTIIANVTAIDLD 799



 Score = 41.6 bits (96), Expect = 0.61,   Method: Compositional matrix adjust.
 Identities = 39/124 (31%), Positives = 62/124 (50%), Gaps = 15/124 (12%)

Query: 92   SRQGDISLMQCLDYETEDSYRFTVYATDTLMTTSAT---VNISVVNVNDWDPRFRYPQYE 148
            S  G +   + +DYE      FTV A+D      A    V + +V++ND +P F  P Y+
Sbjct: 946  SSAGKVIANRTVDYEEVHWLNFTVRASDNGSPPRAAEIPVYLEIVDINDNNPIFDQPSYQ 1005

Query: 149  LFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-DSGHISIVDL 204
              +      D+  G+VI +V A D D G+   +    + G  E  F+IN ++G IS+  L
Sbjct: 1006 EAV----FEDIAVGTVILRVTATDADSGNFALIEYSLVDG--EGKFAINPNTGDISV--L 1057

Query: 205  SALN 208
            S+L+
Sbjct: 1058 SSLD 1061



 Score = 38.1 bits (87), Expect = 6.6,   Method: Compositional matrix adjust.
 Identities = 59/286 (20%), Positives = 116/286 (40%), Gaps = 59/286 (20%)

Query: 4   EDDFL-QPITLVVRA----IQYDNQDRYALATLIVSK-----AGTSL-----RELQFSKN 48
           +D FL  P+T V+R     I  + Q+ Y L  +   +     +GT++      ++  S+ 
Sbjct: 710 QDRFLIHPVTGVIRVGNATIDREEQESYRLTVVATDRGTVPLSGTAIVTILIDDINDSRP 769

Query: 49  EY-----SVSALENLPVNYVLLTVTT-----NKPRDLRVKYWLSNDYGERFSISRQ---- 94
           E+     +VS LE+     ++  VT      N   +  +   ++ D  +R    ++    
Sbjct: 770 EFLNPIQTVSVLESAEPGTIIANVTAIDLDLNPKLEYHIISIVAKDDTDRLVPDQEDAFA 829

Query: 95  -----GDISLMQCLDYETEDSYRFTVYATD--------TLMTTSATVNISVVNVNDWDPR 141
                G + +   L+ E   +Y  T+   D        ++   +A + +++++VND  P+
Sbjct: 830 VNINTGSVMVKSPLNRELVATYEVTLSVIDNASDLPEHSVSVPNAKLTVNILDVNDNTPQ 889

Query: 142 FRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSGHISI 201
           F+      +   + L   TPG+ +  V A D DKG    ++       +  +   G++ +
Sbjct: 890 FKPFGITYYTERV-LEGATPGTTLIAVAAVDPDKGLNGLITY-----TLLDLTPPGYVQL 943

Query: 202 VDLSA-----------LNTSTIQLVVVATDTGNPPRQASVPAIMHF 236
            D SA                +   V A+D G+PPR A +P  +  
Sbjct: 944 EDSSAGKVIANRTVDYEEVHWLNFTVRASDNGSPPRAAEIPVYLEI 989


>gi|194037042|ref|XP_001927136.1| PREDICTED: cadherin-17 [Sus scrofa]
          Length = 832

 Score = 64.7 bits (156), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 76/295 (25%), Positives = 122/295 (41%), Gaps = 37/295 (12%)

Query: 14  VVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPR 73
           +V  +QY N   +A   LIV+    +    QFS+  +     E++P    +  VT   P 
Sbjct: 539 LVSGVQY-NASSFASFRLIVTDVNETP---QFSQQVFQAKVSEDVPKGTKVGNVTAKDPE 594

Query: 74  DLRVKYWLSNDYGERFSISR-QGDISLMQCLDYETEDSYRFTVYATD---TLMTTSATVN 129
            L + Y L  D      I    G+I  +  LD E E  YR  V AT+   + ++++A  +
Sbjct: 595 GLDISYSLRGDKRGWLRIDPVTGEIFSVAPLDREAESLYRVEVVATEVGGSSLSSTANFH 654

Query: 130 ISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEK 189
           +++ +VND  PR       LF  + P     PGS+I   EA D D+       LRGP+  
Sbjct: 655 LALTDVNDNPPRLVKEYTGLFFCYPPKE---PGSLI--FEATDDDQ-----QLLRGPH-F 703

Query: 190 MFSINDSGHISIVDLSALNTSTIQLVVVAT--------------DTGNPPRQASVPAIMH 235
            FS+         ++S +N +   L    T              D G PP + +V   + 
Sbjct: 704 TFSLGSESLQKDWEVSKINGTHASLSTKHTNFEEKVYHIPIRINDGGRPPLEGTVSLPVT 763

Query: 236 F----PEAIVQQASSKLNSGTSSTVLIILGVVLIVLGFVIILLILYIHKNKHTKN 286
           F     E   Q A       T    + IL    +V+G ++ ++ + + +NK   N
Sbjct: 764 FCTCVEERCFQPAERLPGIPTVGMAVGILLTTFLVIGIILAVVFIRMKRNKGQDN 818


>gi|410967896|ref|XP_003990449.1| PREDICTED: LOW QUALITY PROTEIN: cadherin EGF LAG seven-pass G-type
           receptor 2 [Felis catus]
          Length = 2931

 Score = 64.7 bits (156), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 69/219 (31%), Positives = 101/219 (46%), Gaps = 22/219 (10%)

Query: 25  RYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWL 81
           R ALATL +    T+  +  F + EY  S  ENL V Y +LTV     + P +  + Y L
Sbjct: 276 RSALATLTILVTDTNDHDPVFEQQEYKESLRENLEVGYEVLTVRATDGDAPPNANILYRL 335

Query: 82  SNDYG----ERFSIS-RQGDISLMQCLDYETEDSYRFTVYATDT-----LMTTSATVNIS 131
               G    E F I  R G I     +D E  +SY+ TV A+D        + +A V +S
Sbjct: 336 LEGPGGSPSEVFEIDPRSGVIRTRGPVDREEVESYQLTVEASDQGRDPGPRSATAAVFLS 395

Query: 132 VVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYE 188
           V + ND  P+F   +Y + +      D+TPG+ + +V A+D DKG    +    + G   
Sbjct: 396 VEDDNDNAPQFSEKRYVVQV----REDVTPGAPVLRVTASDRDKGSNALVHYSIMSGNAR 451

Query: 189 KMFSIN-DSGHISIVD-LSALNTSTIQLVVVATDTGNPP 225
             F ++  +G + +V  L    T    L V A D G PP
Sbjct: 452 GQFYLDAQTGALDVVSPLDYETTKEYTLRVRAQDGGRPP 490



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 49/171 (28%), Positives = 81/171 (47%), Gaps = 15/171 (8%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGERFSIS---RQGDIS 98
           F    +  + LE++P+ Y++L V     +   + R++Y L+   G  F  +     G IS
Sbjct: 512 FVSTPFQATVLESVPLGYLVLHVQAIDADAGDNARLEYRLAG-VGHDFPFAINNGTGWIS 570

Query: 99  LMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIP 155
           +   LD E  D Y F V A D    ++T SA+V++++++VND +P F  P+Y + L    
Sbjct: 571 VAAELDREEVDFYSFGVEARDHGTPVLTASASVSVTILDVNDNNPTFTQPEYTVRLNE-- 628

Query: 156 LADLTPGSVIGKVEAADGDKGDRVTLSL-RGPYEKMFSINDSGHISIVDLS 205
             D   G+ +  V A D D    +T  +  G     FSI       +V L+
Sbjct: 629 --DAAVGTSVVTVSAVDRDAHSVITYQITSGNTRNRFSITSQSGGGLVSLA 677



 Score = 45.1 bits (105), Expect = 0.059,   Method: Compositional matrix adjust.
 Identities = 51/189 (26%), Positives = 86/189 (45%), Gaps = 14/189 (7%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRDLR--VKYWL-SNDYGERFSISRQ---GDIS 98
           F++ EY+V   E+  V   ++TV+    RD    + Y + S +   RFSI+ Q   G +S
Sbjct: 617 FTQPEYTVRLNEDAAVGTSVVTVSAVD-RDAHSVITYQITSGNTRNRFSITSQSGGGLVS 675

Query: 99  LMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLAD 158
           L   LDY+ E  Y   V A+D     +A V ++V + N   P F+   Y + +      D
Sbjct: 676 LALPLDYKLERQYVLAVTASDGTRQDTAQVVVNVTDANTHRPVFQSSHYTVNVNE----D 731

Query: 159 LTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSINDSGHISI-VDLSALNTSTIQLV 215
              G+ +  + A D D G+  R+T  +     +     D+G ++   +L   +  +  L 
Sbjct: 732 RPAGTTVVLISATDEDTGENARITYFMEDSIPQFRIDADTGAVTTQAELDYEDQVSYTLA 791

Query: 216 VVATDTGNP 224
           + A D G P
Sbjct: 792 ITARDNGIP 800



 Score = 44.3 bits (103), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 40/149 (26%), Positives = 69/149 (46%), Gaps = 10/149 (6%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWL-SNDYGERFSIS-RQGDISL 99
            F ++E+ V   EN P+   +  VT   P +    ++ Y +   +  E F +    G+++ 
Sbjct: 928  FEQDEFDVFVEENSPIGLAVARVTATDPDEGTNAQIMYQIVEGNIPEVFQLDIFSGELTA 987

Query: 100  MQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPH--IPLA 157
            +  LDYE    Y   + AT   + + ATV++ +++ ND  P      +E+   +     +
Sbjct: 988  LVDLDYEDRPEYILVIQATSAPLVSRATVHVRLLDRNDNPPVLG--NFEILFNNYVTNRS 1045

Query: 158  DLTPGSVIGKVEAADGDKGDRVTLSL-RG 185
               PG  IG+V A D D  D +T S  RG
Sbjct: 1046 SSFPGGAIGRVPAHDPDISDSLTYSFERG 1074


>gi|115648153|ref|NP_034016.2| cadherin EGF LAG seven-pass G-type receptor 1 precursor [Mus
           musculus]
 gi|341940538|sp|O35161.3|CELR1_MOUSE RecName: Full=Cadherin EGF LAG seven-pass G-type receptor 1; Flags:
           Precursor
          Length = 3034

 Score = 64.7 bits (156), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 62/229 (27%), Positives = 106/229 (46%), Gaps = 22/229 (9%)

Query: 13  LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTT--- 69
           L V A+ + +  R A   L V+ + T+     F ++EY     ENL V Y +LT+     
Sbjct: 336 LKVSAVDHGSPRRSAATYLTVTVSDTNDHSPVFEQSEYRERIRENLEVGYEVLTIRATDG 395

Query: 70  NKPRDLRVKYWLSNDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDT-----LMT 123
           + P +  ++Y L    G  F I +R G +     +D E    Y+  V A D       ++
Sbjct: 396 DAPSNANMRYRLLEGAGGVFEIDARSGVVRTRAVVDREEAAEYQLLVEANDQGRNPGPLS 455

Query: 124 TSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS- 182
            SATV+I V + ND  P+F   +Y + +P     D+   + + +V+A D D+G    +  
Sbjct: 456 ASATVHIVVEDENDNYPQFSEKRYVVQVPE----DVAVNTAVLRVQATDRDQGQNAAIHY 511

Query: 183 --LRGPYEKMFSIND-SGHISIV---DLSALNTSTIQLVVVATDTGNPP 225
             + G  +  F ++  SG + ++   D  A+   T++  + A D G PP
Sbjct: 512 SIVSGNLKGQFYLHSLSGSLDVINPLDFEAIREYTLR--IKAQDGGRPP 558



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 53/189 (28%), Positives = 87/189 (46%), Gaps = 14/189 (7%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRDLR--VKYWLSN-DYGERFSISRQ---GDIS 98
           F++  Y +   E+  V   +LT+   + RD    + Y L+  +   RF++S Q   G I+
Sbjct: 702 FTQPVYELRLNEDAAVGSSVLTLRA-RDRDANSVITYQLTGGNTRNRFALSSQSGGGLIT 760

Query: 99  LMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLAD 158
           L   LDY+ E  Y   V A+D   + +A V I+V + N   P F+   Y + +      D
Sbjct: 761 LALPLDYKQERQYVLAVTASDGTRSHTAQVFINVTDANTHRPVFQSSHYTVSVSE----D 816

Query: 159 LTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSINDSGHI-SIVDLSALNTSTIQLV 215
              G+ I  + A D D G+  R+T  L  P  +     D+G I ++ +L   + +   L 
Sbjct: 817 RPVGTSIATISATDEDTGENARITYVLEDPVPQFRIDPDTGTIYTMTELDYEDQAAYTLA 876

Query: 216 VVATDTGNP 224
           + A D G P
Sbjct: 877 ITAQDNGIP 885



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 49/168 (29%), Positives = 76/168 (45%), Gaps = 33/168 (19%)

Query: 45  FSKNEYSVSALENLPVNYVLL---TVTTNKPRDLRVKYWL-------------------- 81
           F  + +  + LEN+P+ + +L    V  +   + R++Y L                    
Sbjct: 580 FVSSPFQAAVLENVPLGHSVLHIQAVDADAGENARLQYRLVDTASTIVGGSSVDSENPAS 639

Query: 82  SNDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVND 137
           + D+   F I +  G I++   LD E  + Y F V A D     M++SA+V+I+V++VND
Sbjct: 640 APDF--PFQIHNSSGWITVCAELDREEVEHYSFGVEAVDHGSPAMSSSASVSITVLDVND 697

Query: 138 WDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRG 185
            DP F  P YEL L      D   GS +  + A D D    +T  L G
Sbjct: 698 NDPMFTQPVYELRLNE----DAAVGSSVLTLRARDRDANSVITYQLTG 741



 Score = 45.8 bits (107), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 38/140 (27%), Positives = 65/140 (46%), Gaps = 9/140 (6%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWL-SNDYGERFSISR-QGDISL 99
            F K+E  +   EN PV  V+  +  N P +    ++ Y +   +  E F +    GD+  
Sbjct: 1014 FEKDELELFVEENSPVGSVVARIRANDPDEGPNAQIMYQIVEGNVPEVFQLDLLSGDLRA 1073

Query: 100  MQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPH--IPLA 157
            +  LD+E    Y   V AT   + + ATV+I +++ ND  P    P +++   +     +
Sbjct: 1074 LVELDFEVRRDYMLVVQATSAPLVSRATVHIRLLDQNDNPPEL--PDFQILFNNYVTNKS 1131

Query: 158  DLTPGSVIGKVEAADGDKGD 177
            +  P  VIG++ A D D  D
Sbjct: 1132 NSFPSGVIGRIPAHDPDLSD 1151



 Score = 43.5 bits (101), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 53/209 (25%), Positives = 89/209 (42%), Gaps = 23/209 (11%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTTNKPRDL---RVKYWLSNDYGER----FSI-SRQG 95
           QF    Y VS  EN P    ++ +  + P +    R+ Y +   + ER    F I +  G
Sbjct: 259 QFPLPSYQVSVPENEPAGTAVIELRAHDPDEGDAGRLSYQMEALFDERSNGYFLIDAATG 318

Query: 96  DISLMQCLDYETEDSYRFTVYATD--TLMTTSAT-VNISVVNVNDWDPRFRYPQYELFLP 152
            ++  + LD ET+D++   V A D  +   ++AT + ++V + ND  P F   +Y   + 
Sbjct: 319 AVTTARSLDRETKDTHVLKVSAVDHGSPRRSAATYLTVTVSDTNDHSPVFEQSEYRERI- 377

Query: 153 HIPLADLTPGSVIGKVEAADGDKGDRVTLSLR--GPYEKMFSINDSGHI----SIVDLSA 206
                +L  G  +  + A DGD      +  R       +F I+    +    ++VD   
Sbjct: 378 ---RENLEVGYEVLTIRATDGDAPSNANMRYRLLEGAGGVFEIDARSGVVRTRAVVDRE- 433

Query: 207 LNTSTIQLVVVATDTGNPPRQASVPAIMH 235
              +  QL+V A D G  P   S  A +H
Sbjct: 434 -EAAEYQLLVEANDQGRNPGPLSASATVH 461


>gi|347543915|gb|AEP02530.1| CDH23, partial [Rousettus leschenaultii]
          Length = 3276

 Score = 64.7 bits (156), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 60/195 (30%), Positives = 90/195 (46%), Gaps = 20/195 (10%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWLSNDYGERFSIS-RQGDISLM 100
            F +  Y  +  E++PV  V+LTVT           ++Y L +  G +FSI+   GDI ++
Sbjct: 2394 FGQPSYQEAVFEDVPVGTVILTVTATDADSGNFALIEYSLGDGEG-KFSINPTTGDIYVL 2452

Query: 101  QCLDYETEDSYRFTVYATD-------TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
              LD E +D Y  T  A D            S  V I V++VND  P+F  PQ+   +  
Sbjct: 2453 SSLDREKKDHYILTALAKDNPGDIASNRRENSVQVVIQVLDVNDCRPQFSKPQFSTSV-- 2510

Query: 154  IPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIN-DSGHISIVDLSALNTS 210
                +   G+ +  + A D D+G    +  SL GP  + F ++ DSG ++       +  
Sbjct: 2511 --YENEPAGTSVITMMATDQDEGTNGELAYSLEGPGVEAFHVDMDSGLVT-TKRPLHSYE 2567

Query: 211  TIQLVVVATDTGNPP 225
               L VVATD G PP
Sbjct: 2568 RFNLTVVATDGGEPP 2582



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 68/218 (31%), Positives = 101/218 (46%), Gaps = 44/218 (20%)

Query: 45  FSKNEYSVSALENLPVNY-VLLTVTTNKPRDLRVKYWLSNDYGE-----------RFSI- 91
           FSK  Y VS +EN+     VL    T+  R        S +YG+           +F I 
Sbjct: 663 FSKPAYFVSVVENIMAGATVLFLNATDLDR--------SREYGQESIIYSLEGSSQFRIN 714

Query: 92  SRQGDISLMQCLDYETEDSYRFTVYATD-----TLMTTSATVNISVVNVNDWDPRFRYPQ 146
           +R G+I+    LD ET+  Y   V A D        T  ATVNI+++++ND  P ++   
Sbjct: 715 ARSGEITTTSLLDRETKSEYILIVRAVDGGVGHNQKTGIATVNITLLDINDNHPTWKDAP 774

Query: 147 YELFLPHIPLADLT-PGSVIGKVEAADGDKGDRVTL--SLRGPYEKMFSINDS-GHIS-- 200
           Y     +I L ++T P S +  V A D D G+  TL  S++ P  K +S+N S G I   
Sbjct: 775 Y-----YINLVEMTPPDSDVTTVVAVDPDLGENGTLVYSIQPP-NKFYSLNSSTGKIRTT 828

Query: 201 --IVDLSALNTSTIQL----VVVATDTGNPPRQASVPA 232
             ++D    +    +L    +V  TD G PP +A+  A
Sbjct: 829 HVMLDRENPDPQEAELMRKIIVSVTDCGKPPLRATSSA 866



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 63/210 (30%), Positives = 98/210 (46%), Gaps = 28/210 (13%)

Query: 45  FSKNEYSVSALENLPVNYVLLTV--TTNKPRDL-RVKYWLSNDYGERFSISRQ-GDISLM 100
           FS+  Y++S  EN+ V   +LTV  T N       V Y+ S+D  +RFS+ +  G I L+
Sbjct: 452 FSQPLYNISLYENVTVGTSVLTVLATDNDVGTFGEVNYFFSDD-PDRFSLDKDTGLIMLI 510

Query: 101 QCLDYETEDSYRFTVYATDTL-MTTSATVNISVVNVNDWDPRFRYPQYELFL----PHIP 155
             LDYE    +  T+ A D     T+  V I+V++VND  P F+   Y   L    P + 
Sbjct: 511 ARLDYELIQRFTLTIIARDGGGEETTGRVRINVLDVNDNVPTFQKDAYVGALRENEPSV- 569

Query: 156 LADLTPGSVIGKVEAADGDK--GDRVTLSL-----RGPYEKMFSINDSGHISI---VDLS 205
                  + + ++ A D D    +++T S+      G Y  +      G IS+   +D  
Sbjct: 570 -------TQLVRLRATDEDSPPNNQITYSIVNASAFGSYFDISVYEGYGVISVSHPLDYE 622

Query: 206 ALNTSTIQLVVVATDTGNPPRQASVPAIMH 235
            +    I L V+A D GNPP  ++VP  + 
Sbjct: 623 QIPNGLIYLTVMAKDAGNPPLNSTVPVTIE 652



 Score = 46.2 bits (108), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 60/204 (29%), Positives = 91/204 (44%), Gaps = 25/204 (12%)

Query: 43   LQFSKNEYSVSALENLPVNYVLLTVTTNKPRDL-----RVKYWLSNDYGERFSISR-QGD 96
            +QFS   Y  S LENL +   ++ V      ++     R   + S      F I    G 
Sbjct: 1303 VQFSNTSYEASILENLALGTEIVRVQAYSIDNINQITYRFDAYTSAQAKALFRIDAITGV 1362

Query: 97   ISLMQCLDYETEDSYRFTVYATDTLMTTSATVN--ISVVNVNDWDPRFRYPQYELFLPHI 154
            I++   +D E  D Y  TV A D      +TV   I+V++ ND  PRF +    +    +
Sbjct: 1363 ITVKGLVDREKGDFYTLTVVADDGGPKVDSTVKVYITVLDENDNSPRFDFTSDSVV--SV 1420

Query: 155  PLADLTPGSVIGKVEAADGDKGD--RVTLSLR-----GPYEKMFSINDS-GHISI---VD 203
            P  D   G  +  V+A D D G   +V  SL      G +E + + NDS G + +   +D
Sbjct: 1421 P-EDCPVGQRVATVKARDPDAGSNGQVVFSLASGNVAGAFE-IVTTNDSVGEVFVARPLD 1478

Query: 204  LSALNTSTIQLVVVATDTGNPPRQ 227
               L+   ++  VVA+D G PPR+
Sbjct: 1479 REELDHYILK--VVASDRGIPPRK 1500



 Score = 43.1 bits (100), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 62/235 (26%), Positives = 103/235 (43%), Gaps = 45/235 (19%)

Query: 65   LTVTTNKPRDLRVKYWLS---NDYGERFSIS----------------RQGDISLMQCLDY 105
            ++V+ + PRD RV  WL+   ND G    +S                R   +  +  LD 
Sbjct: 994  VSVSEDVPRDFRV-VWLNCTDNDVGLNAELSYFITGGNVDGKFRVGYRDAVVRTVVNLDR 1052

Query: 106  ETEDSYRFTVYATDT-----LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLT 160
            ET  +Y   + A D        T +ATV ++V++VND  P F    YE  +P     D+ 
Sbjct: 1053 ETTAAYTLVLEAIDNGPVGKRHTGTATVFVTVLDVNDNRPIFLQSSYEASVPE----DIP 1108

Query: 161  PGSVIGKVEAADGDKGD--RVTLS-LRGPYEKMFSINDSGHISIVDLSALNT---STIQL 214
             G  I ++ A D D+G+  RV    L G +   F I+ S  + +     L+    S+  L
Sbjct: 1109 EGHSIVQLMATDADEGEFGRVWYRILHGNHGSNFRIHVSSGLLMRGPQPLDREQDSSHVL 1168

Query: 215  VVVATDTGNPPRQASVPAIMHFPE------AIVQQASSKL----NSGTSSTVLII 259
            +V A +    P ++SV  I++  +         QQ  S+L     +G  ++V+++
Sbjct: 1169 IVEAYNHDLGPMRSSVRVIVYVEDVNDEAPVFTQQQYSRLALRETAGIGTSVIVV 1223



 Score = 43.1 bits (100), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 42/148 (28%), Positives = 69/148 (46%), Gaps = 19/148 (12%)

Query: 44  QFSKNEYSVSALENLPVNYVL--LTVTTNKPRDLRV----KYWLSNDYGERF-----SIS 92
           +F+ +EYSV+  E   V + L       +K  +L +    + +L  +    F     S+ 
Sbjct: 339 EFNSSEYSVAITELAQVGFALPLFIQVVDKDENLGLNSMFEVYLVGNNSHHFIISPTSVQ 398

Query: 93  RQGDISLMQC--LDYETEDSYRFTVYATDTL--MTTSATVNISVVNVNDWDPRFRYPQYE 148
            + DI +     LDYET D Y F ++A +++      A V I+++N ND  P F  P Y 
Sbjct: 399 GKADIRIRVAIPLDYETVDRYDFDLFANESVPDHVGYAKVKITLINENDNRPIFSQPLYN 458

Query: 149 LFLPHIPLADLTPGSVIGKVEAADGDKG 176
           + L      ++T G+ +  V A D D G
Sbjct: 459 ISL----YENVTVGTSVLTVLATDNDVG 482



 Score = 40.4 bits (93), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 34/107 (31%), Positives = 49/107 (45%), Gaps = 8/107 (7%)

Query: 92   SRQGDISLMQCLDYETEDSYRFTVYATDTLMTTSAT---VNISVVNVNDWDPRFRYPQYE 148
            S  G +   + +DYE      FTV A+D      A    V + +V++ND +P F  P Y+
Sbjct: 2341 SSAGKVIANRTVDYEEVHWLNFTVRASDNGSPPRAAEIPVYLEIVDINDNNPIFGQPSYQ 2400

Query: 149  LFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSIN 194
              +      D+  G+VI  V A D D G+   +    G  E  FSIN
Sbjct: 2401 EAV----FEDVPVGTVILTVTATDADSGNFALIEYSLGDGEGKFSIN 2443



 Score = 38.5 bits (88), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 58/203 (28%), Positives = 87/203 (42%), Gaps = 22/203 (10%)

Query: 31  LIVSKAGTSLRELQFSKNEYSVSAL---ENLPVNYVLLTVTTNKPRDLR---VKYWLSND 84
           +++S     +  L F  N +  + L   E+ PV     +VT    RD+    + + +S +
Sbjct: 8   VLISGCWGQVNRLPFFTNHFFDTYLLISEDTPVGS---SVTQLLARDMDNDPLVFGVSGE 64

Query: 85  YGERFSISR--QGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRF 142
              RF       G + L Q LD ET+  +      +D     +  VNI V +VND  P F
Sbjct: 65  EASRFFAVEPDTGVVWLRQPLDRETKSEFTVEFSVSDHQGVITRKVNIQVGDVNDNAPTF 124

Query: 143 RYPQYELFLPHIPLADLTP-GSVIGKVEAADGD--KGDRVTLSLRGPYEKMFSINDSGHI 199
               Y + +P     + TP G+ I  V A D D   G  V  S + P  + F+I+ +  I
Sbjct: 125 HNQPYSVRIP-----ENTPVGTPIFIVNATDPDLGAGGSVLYSFQPP-SQFFAIDSARGI 178

Query: 200 SIV--DLSALNTSTIQLVVVATD 220
             V  +L    T   QL V ATD
Sbjct: 179 VTVTRELDYEITQAYQLTVNATD 201



 Score = 37.7 bits (86), Expect = 8.8,   Method: Compositional matrix adjust.
 Identities = 65/286 (22%), Positives = 121/286 (42%), Gaps = 61/286 (21%)

Query: 4    EDDFL-QPITLVVRA----IQYDNQDRYALATLIVSK-----AGTSL-----RELQFSKN 48
            +D FL  P+T V+R     I  + Q+ Y L  +   +     +GT++      ++   + 
Sbjct: 2105 QDRFLIHPVTGVIRVGNATIDREEQESYRLTVVATDRGTVPLSGTAIITILIDDINDCRP 2164

Query: 49   EY-----SVSALENLPVNYVLLTVTTNKPRDL--RVKYW----LSNDYGER--------F 89
            E+     +VS LE+     V+  VT    RDL  +++Y     L+ D  +R        F
Sbjct: 2165 EFLNPIQTVSVLESAEPGTVIANVTAID-RDLNPKLEYHIIGILAKDDTDRLVPDQEDAF 2223

Query: 90   SIS-RQGDISLMQCLDYETEDSYRFTVYATD--------TLMTTSATVNISVVNVNDWDP 140
            +++   G + +   L+ E   +Y  T+   D        ++   +A + +++++VND  P
Sbjct: 2224 AVNINTGSVMVKSPLNRELVATYEVTLSVIDNASDLPERSVSVPNAKLTVNILDVNDNTP 2283

Query: 141  RFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSGHIS 200
            +F+ P    +     L   TPG+ +  V A D DKG    ++       +  +   G++ 
Sbjct: 2284 QFK-PFGITYYTERVLEGATPGTTLIAVAAVDPDKGLNGLITY-----TLLDLVPPGYVQ 2337

Query: 201  IVDLSA-----------LNTSTIQLVVVATDTGNPPRQASVPAIMH 235
            + D SA                +   V A+D G+PPR A +P  + 
Sbjct: 2338 LEDSSAGKVIANRTVDYEEVHWLNFTVRASDNGSPPRAAEIPVYLE 2383


>gi|405778352|ref|NP_001258306.1| protocadherin-15 precursor [Rattus norvegicus]
          Length = 1791

 Score = 64.7 bits (156), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 62/195 (31%), Positives = 99/195 (50%), Gaps = 14/195 (7%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGER-FSISRQ-GDISLMQ 101
           +F +  YS+   E + +  VLL +         + Y + N   +R F++S   G +SL +
Sbjct: 627 RFPQLMYSLEVSEAMRIGAVLLNLQATDREGDPITYAIENGDPQRVFNLSETTGILSLGK 686

Query: 102 CLDYETEDSYRFTVYATDTL--MTTSATVNISVVNVNDWDPRFRYPQYELFLP-HIPLAD 158
            LD E+ D Y   V A+D     T++ATVNI V +VND  P F     + +LP ++ + +
Sbjct: 687 ALDRESTDRYILIVTASDGRPDGTSTATVNIVVTDVNDNAPVF-----DPYLPRNLSVVE 741

Query: 159 LTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDSGHI-SIVDLSALNTSTIQLV 215
               + +G+V A D D G   +V  SL G +  +F I  +G I + V L+       +LV
Sbjct: 742 EEANAFVGQVRATDPDAGINGQVHYSL-GNFNNLFRITSNGSIYTAVKLNREARDHYELV 800

Query: 216 VVATDTGNPPRQASV 230
           VVATD    PR +++
Sbjct: 801 VVATDGAVHPRHSTL 815



 Score = 51.2 bits (121), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 66/252 (26%), Positives = 111/252 (44%), Gaps = 42/252 (16%)

Query: 6   DFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVL- 64
           DF Q   LV++A Q +     A A+L +     + +   F+   Y    LE+ PV   + 
Sbjct: 361 DFHQKFDLVIKAEQDNGHPLPAFASLHIEILDENNQSPYFTMPSYQGYILESAPVGATIS 420

Query: 65  --LTVTT------------NKP------RDLRVKYWLSNDYGERFSISRQG---DISLMQ 101
             L +TT            + P      +D  +  +L NDY   F+++  G    ++L+Q
Sbjct: 421 ESLNLTTPLRIVALDKDIEDVPPGGVPTKDPELHLFL-NDYTSVFTVTPTGITRYLTLLQ 479

Query: 102 CLDYETEDSYRFTVYATDTLMTTS-ATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLT 160
            +D E + +Y F + A D +  +    VNI V++ ND  P F    Y +++      D++
Sbjct: 480 PVDREEQQTYTFLITAFDGVQESEPVVVNIRVMDANDNTPTFPEISYNVYV----YTDMS 535

Query: 161 PGSVIGKVEAADGDKGDRVTLSLRGPYEKM------FSIND-SGHISIV-DLSALNTSTI 212
           PG  + ++ A D D+G    +S    YE +      F IN  +G +SI   +  +   T 
Sbjct: 536 PGDSVIQLTAVDADEGSNGEIS----YEILVGSKGDFVINRTTGLVSIAPGVELVVGQTY 591

Query: 213 QLVVVATDTGNP 224
            L V A+D   P
Sbjct: 592 ALTVQASDNAPP 603



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 72/233 (30%), Positives = 104/233 (44%), Gaps = 26/233 (11%)

Query: 13   LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKP 72
            LVV A       R++  TL +           F+ + Y+V   ENLP     L +   K 
Sbjct: 799  LVVVATDGAVHPRHSTLTLYIKVLDIDDNSPVFTNSTYTVVVEENLPAGTAFLQIEA-KD 857

Query: 73   RDL--RVKYWL-SNDYGERFSISR-QGDISLMQCLDYET----EDSYRFTVYATD---TL 121
             DL   V Y + S +    F++    G++SL++ LDYE     E S  F V A D   T+
Sbjct: 858  VDLGANVSYRIRSPEVKHLFALHPFTGELSLLRSLDYEAFPDQEASITFLVEAFDIYGTM 917

Query: 122  MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDK----GD 177
                ATV + V ++ND+ P F    Y+  +      D   G+ I  V A D D       
Sbjct: 918  PPGIATVTVIVKDMNDYPPVFSKRIYKGMV----APDAVKGTPITTVYAEDADPPGLPAS 973

Query: 178  RVTL---SLRGPY-EKMFSIN-DSGH-ISIVDLSALNTSTIQLVVVATDTGNP 224
            RV      ++ PY   +F +  DSG  I+ V+L+   T+  +LVVVA D G P
Sbjct: 974  RVRYRVDDVQFPYPASIFDVEEDSGRVITRVNLNEEPTTIFKLVVVAFDDGEP 1026


>gi|3800736|gb|AAC68836.1| seven-pass transmembrane receptor precursor [Mus musculus]
          Length = 3034

 Score = 64.7 bits (156), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 62/229 (27%), Positives = 106/229 (46%), Gaps = 22/229 (9%)

Query: 13  LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTT--- 69
           L V A+ + +  R A   L V+ + T+     F ++EY     ENL V Y +LT+     
Sbjct: 336 LKVSAVDHGSPRRSAATYLTVTVSDTNDHSPVFEQSEYRERIRENLEVGYEVLTIRATDG 395

Query: 70  NKPRDLRVKYWLSNDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDT-----LMT 123
           + P +  ++Y L    G  F I +R G +     +D E    Y+  V A D       ++
Sbjct: 396 DAPSNANMRYRLLEGAGGVFEIDARSGVVRTRAVVDREEAAEYQLLVEANDQGRNPGPLS 455

Query: 124 TSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS- 182
            SATV+I V + ND  P+F   +Y + +P     D+   + + +V+A D D+G    +  
Sbjct: 456 ASATVHIVVEDENDNYPQFSEKRYVVQVPE----DVAVNTAVLRVQATDRDQGQNAAIHY 511

Query: 183 --LRGPYEKMFSIND-SGHISIV---DLSALNTSTIQLVVVATDTGNPP 225
             + G  +  F ++  SG + ++   D  A+   T++  + A D G PP
Sbjct: 512 SIVSGNLKGQFYLHSLSGSLDVINPLDFEAIREYTLR--IKAQDGGRPP 558



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 53/189 (28%), Positives = 87/189 (46%), Gaps = 14/189 (7%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRDLR--VKYWLSN-DYGERFSISRQ---GDIS 98
           F++  Y +   E+  V   +LT+   + RD    + Y L+  +   RF++S Q   G I+
Sbjct: 702 FTQPVYELRLNEDAAVGSSVLTLRA-RDRDANSVITYQLTGGNTRNRFALSSQSGGGLIT 760

Query: 99  LMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLAD 158
           L   LDY+ E  Y   V A+D   + +A V I+V + N   P F+   Y + +      D
Sbjct: 761 LALPLDYKQERQYVLAVTASDGTRSHTAQVFINVTDANTHRPVFQSSHYTVSVSE----D 816

Query: 159 LTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSINDSGHI-SIVDLSALNTSTIQLV 215
              G+ I  + A D D G+  R+T  L  P  +     D+G I ++ +L   + +   L 
Sbjct: 817 RPVGTSIATISATDEDTGENARITYVLEDPVPQFRIDPDTGTIYTMTELDYEDQAAYTLA 876

Query: 216 VVATDTGNP 224
           + A D G P
Sbjct: 877 ITAQDNGIP 885



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 49/168 (29%), Positives = 76/168 (45%), Gaps = 33/168 (19%)

Query: 45  FSKNEYSVSALENLPVNYVLL---TVTTNKPRDLRVKYWL-------------------- 81
           F  + +  + LEN+P+ + +L    V  +   + R++Y L                    
Sbjct: 580 FVSSPFQAAVLENVPLGHSVLHIQAVDADAGENARLQYRLVDTASTIVGGSSVDSENPAS 639

Query: 82  SNDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVND 137
           + D+   F I +  G I++   LD E  + Y F V A D     M++SA+V+I+V++VND
Sbjct: 640 APDF--PFQIHNSSGWITVCAELDREEVEHYSFGVEAVDHGSPAMSSSASVSITVLDVND 697

Query: 138 WDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRG 185
            DP F  P YEL L      D   GS +  + A D D    +T  L G
Sbjct: 698 NDPMFTQPVYELRLNE----DAAVGSSVLTLRARDRDANSVITYQLTG 741



 Score = 45.1 bits (105), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 38/140 (27%), Positives = 65/140 (46%), Gaps = 9/140 (6%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWL-SNDYGERFSISR-QGDISL 99
            F K+E  +   EN PV  V+  +  N P +    ++ Y +   +  E F +    GD+  
Sbjct: 1014 FEKDELELFVEENSPVGSVVARIRANDPDEGPNAQIIYQIVEGNVPEVFQLDLLSGDLRA 1073

Query: 100  MQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPH--IPLA 157
            +  LD+E    Y   V AT   + + ATV+I +++ ND  P    P +++   +     +
Sbjct: 1074 LVELDFEVRRDYMLVVQATSAPLVSRATVHIRLLDQNDNPPEL--PDFQILFNNYVTNKS 1131

Query: 158  DLTPGSVIGKVEAADGDKGD 177
            +  P  VIG++ A D D  D
Sbjct: 1132 NSFPSGVIGRIPAHDPDLSD 1151



 Score = 43.5 bits (101), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 53/209 (25%), Positives = 89/209 (42%), Gaps = 23/209 (11%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTTNKPRDL---RVKYWLSNDYGER----FSI-SRQG 95
           QF    Y VS  EN P    ++ +  + P +    R+ Y +   + ER    F I +  G
Sbjct: 259 QFPLPSYQVSVPENEPAGTAVIELRAHDPDEGDAGRLSYQMEALFDERSNGYFLIDAATG 318

Query: 96  DISLMQCLDYETEDSYRFTVYATD--TLMTTSAT-VNISVVNVNDWDPRFRYPQYELFLP 152
            ++  + LD ET+D++   V A D  +   ++AT + ++V + ND  P F   +Y   + 
Sbjct: 319 AVTTARSLDRETKDTHVLKVSAVDHGSPRRSAATYLTVTVSDTNDHSPVFEQSEYRERI- 377

Query: 153 HIPLADLTPGSVIGKVEAADGDKGDRVTLSLR--GPYEKMFSINDSGHI----SIVDLSA 206
                +L  G  +  + A DGD      +  R       +F I+    +    ++VD   
Sbjct: 378 ---RENLEVGYEVLTIRATDGDAPSNANMRYRLLEGAGGVFEIDARSGVVRTRAVVDRE- 433

Query: 207 LNTSTIQLVVVATDTGNPPRQASVPAIMH 235
              +  QL+V A D G  P   S  A +H
Sbjct: 434 -EAAEYQLLVEANDQGRNPGPLSASATVH 461


>gi|441620238|ref|XP_004088652.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 1 [Nomascus
            leucogenys]
          Length = 4585

 Score = 64.3 bits (155), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 62/213 (29%), Positives = 103/213 (48%), Gaps = 18/213 (8%)

Query: 33   VSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTV-TTNKPRDL--RVKYWLSNDYG-ER 88
            V+  G +L    F +NEY V   EN P++ +++ V TT++   +   V Y + ND+  +R
Sbjct: 2477 VTVIGGNLHSPAFLQNEYEVELAENAPLHTLVMEVKTTDRDSGIYGHVTYHIVNDFAKDR 2536

Query: 89   FSISRQGDISLMQCLDYETEDSYRFTVY---ATDTLMTTSATVNISVVNVNDWDPRFRYP 145
            F I+ +G I  ++ LD ET      +V      D       TVN+ + + ND  P+FR  
Sbjct: 2537 FYINERGQIFTLEKLDRETPAEKVISVRLMAKDDGGKVAFCTVNVILTDDNDNAPQFRAT 2596

Query: 146  QYELFLPHIPLADLTPGSVIGKVEAADGDKGDR--VTLSLRGPYEKM---FSIND-SGHI 199
            +YE+ +     +    G+ + KV A+D D+G    VT ++    E +     IN  SG +
Sbjct: 2597 KYEVNIG----SSAAKGTSVIKVLASDADEGSNADVTYAIEADSESVKENLEINKLSGVV 2652

Query: 200  SIVD-LSALNTSTIQLVVVATDTGNPPRQASVP 231
            +  + L  L        V A D G+P +++ VP
Sbjct: 2653 TTKESLIGLENEFFTFFVRAADNGSPSKESVVP 2685



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 56/201 (27%), Positives = 94/201 (46%), Gaps = 23/201 (11%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSN-DYGERFSIS-RQGDISLMQC 102
            F K  YS    EN+ V+  ++ V  N P  L+V Y +++ D   +F+I+   G I+++  
Sbjct: 2179 FEKPFYSAEIAENIQVHSPVVHVQANSPEGLKVFYSITDGDPFSQFTINFNTGVINVIAP 2238

Query: 103  LDYETEDSYRFTVYATDTLMTTSATVNISVV--NVNDWDPRFRYPQYELFLPHIPLADLT 160
            LD+E   +Y+ ++ ATD+L    A V + ++  ++ND  P F    Y         A L+
Sbjct: 2239 LDFEAHPAYKLSIRATDSLTGAHAEVFVDIIVEDINDNPPVFAQQSY--------AATLS 2290

Query: 161  PGSVIG----KVEAADGDKGDRVTLS------LRGPYEKMFSINDSGHISIVD-LSALNT 209
              SVIG    +V A D D      +S      L   ++     +++G IS++  L    +
Sbjct: 2291 EASVIGTSVVQVRATDSDSEPNRGISYHMFGNLSKSHDHFHVDSNTGLISLLRTLDYEQS 2350

Query: 210  STIQLVVVATDTGNPPRQASV 230
                + V A D G PP  + V
Sbjct: 2351 RQHTIFVRAVDGGMPPLSSDV 2371



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 62/215 (28%), Positives = 102/215 (47%), Gaps = 21/215 (9%)

Query: 27   ALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLS---- 82
            A  T++VS    +     F   EY  +  E++ V   +L V     RD+     ++    
Sbjct: 3209 ATGTVVVSVLDINDNPPVFEYREYGATVSEDILVGTEVLQVYAAS-RDIEANAEITYSII 3267

Query: 83   --NDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVN 136
              N++G +FSI S+ G + +++ LDYE+   Y  TV ATD     ++  ATVNI+V ++N
Sbjct: 3268 SGNEHG-KFSIDSKTGAVFIIENLDYESSHEYYLTVEATDGGTPSLSDVATVNINVTDIN 3326

Query: 137  DWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS-LRGPYEKMFSIND 195
            D  P F    Y   +    + + +  +V+   + ADG     +  S + G     F+I+ 
Sbjct: 3327 DNTPVFSQDTYTAVISEDAVLEQSVITVMA--DDADGPSNSHIHYSIIDGNQGSSFTIDP 3384

Query: 196  -SGHISIVDLSALNTSTIQ---LVVVATDTGNPPR 226
              G + +  L  L+  TI    L V A+D G+PPR
Sbjct: 3385 IRGEVKVTKL--LDRETISGYTLTVQASDNGSPPR 3417



 Score = 54.3 bits (129), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 58/244 (23%), Positives = 105/244 (43%), Gaps = 40/244 (16%)

Query: 4    EDDFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYV 63
            E++F    T  VRA    +  + ++  + V      ++  +FS+  Y+ +  E++P+   
Sbjct: 2662 ENEFF---TFFVRAADNGSPSKESVVPVYVKILPPEMQLPKFSEPFYTYTVSEDVPIGTE 2718

Query: 64   LLTVTTNKPRDLRVKYWLSN----DYGERFSISRQ-GDISLMQCLDYETEDSYRFTVYAT 118
            +  +       +       N    +  E F I RQ G + L + LD+ET   Y+F++ A 
Sbjct: 2719 IDLIRAEHSGTVLYSLVKGNTPESNRDESFVIDRQSGRLKLEKSLDHETTKWYQFSILAR 2778

Query: 119  ----DTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGD 174
                D  +  S  V+I V + ND  P F    YE F+    + +L  GS + ++ A+D D
Sbjct: 2779 CTQDDHEVVASVDVSIQVKDANDNSPVFESSPYEAFI----VENLPGGSRVIQIRASDAD 2834

Query: 175  KGDRVTLSLRGPYEKMFSINDSGHISIVDLSALNTST----------------IQLVVVA 218
             G    +        M+S++ S  + +++  A+N  T                 Q+ VVA
Sbjct: 2835 SGTNSQV--------MYSLDQSQSVEVIESFAINMETGWITTLKELDHEKRDNYQIKVVA 2886

Query: 219  TDTG 222
            +D G
Sbjct: 2887 SDHG 2890



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 43/145 (29%), Positives = 69/145 (47%), Gaps = 8/145 (5%)

Query: 90   SISRQGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYEL 149
            +I  +  + + + LD E  D+Y  T+ ATD   ++ A V + V++ ND  P      Y  
Sbjct: 2968 NIQNEWKVYVKKPLDREKRDNYLLTITATDGTFSSKAIVEVKVLDANDNSPVCEKTLYSD 3027

Query: 150  FLPHIPLADLTPGSVIGKVEAADGD--KGDRVTLSLRGPYEKMFSIN-DSGHI-SIVDLS 205
             +P     D+ PG +I ++ A D D      +T +L G   + F +N D+G + +   L 
Sbjct: 3028 TIPE----DVLPGKLIMQISATDADIRSNAEITYTLLGSGAEKFKLNPDTGELRTSTPLD 3083

Query: 206  ALNTSTIQLVVVATDTGNPPRQASV 230
                +   L+V ATD G    QASV
Sbjct: 3084 REEQAVYHLLVRATDGGGRFCQASV 3108



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 61/225 (27%), Positives = 108/225 (48%), Gaps = 19/225 (8%)

Query: 13   LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVT---T 69
            L+VRA   D   R+  A+++++    +    +FS + Y+++  EN     +L  V     
Sbjct: 3092 LLVRAT--DGGGRFCQASVVLTLEDVNDSAPEFSADPYAITVFENTEPGTLLTRVQATDA 3149

Query: 70   NKPRDLRVKYWLSNDYGERFSISR-QGDISLMQCLDYETEDSYRFTVYATDT----LMTT 124
            +   + ++ Y L +    +FSI+   G I L + LD E +  Y  ++ A D      +T 
Sbjct: 3150 DAGLNRKILYSLIDSADGQFSINELSGIIQLEKPLDRELQAVYTLSLKAVDQGLPRRLTA 3209

Query: 125  SATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAA--DGDKGDRVTLS 182
            + TV +SV+++ND  P F Y +Y   +      D+  G+ + +V AA  D +    +T S
Sbjct: 3210 TGTVVVSVLDINDNPPVFEYREYGATVSE----DILVGTEVLQVYAASRDIEANAEITYS 3265

Query: 183  -LRGPYEKMFSIND-SGHISIVD-LSALNTSTIQLVVVATDTGNP 224
             + G     FSI+  +G + I++ L   ++    L V ATD G P
Sbjct: 3266 IISGNEHGKFSIDSKTGAVFIIENLDYESSHEYYLTVEATDGGTP 3310



 Score = 44.7 bits (104), Expect = 0.075,   Method: Compositional matrix adjust.
 Identities = 39/142 (27%), Positives = 68/142 (47%), Gaps = 16/142 (11%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYG----ERFSISRQ-GD 96
            F  + Y    +ENLP    ++ +     +   + +V Y L         E F+I+ + G 
Sbjct: 2806 FESSPYEAFIVENLPGGSRVIQIRASDADSGTNSQVMYSLDQSQSVEVIESFAINMETGW 2865

Query: 97   ISLMQCLDYETEDSYRFTVYATD----TLMTTSATVNISVVNVNDWDPRFRYPQYELFLP 152
            I+ ++ LD+E  D+Y+  V A+D      ++++A V+++V +VND  PRF    Y+  + 
Sbjct: 2866 ITTLKELDHEKRDNYQIKVVASDHGEKIHLSSTAIVDVTVTDVNDSPPRFTAEIYKGTVS 2925

Query: 153  HIPLADLTPGSVIGKVEAADGD 174
                 D  PG VI  +   D D
Sbjct: 2926 E----DDPPGGVIAILSTTDAD 2943



 Score = 44.7 bits (104), Expect = 0.086,   Method: Compositional matrix adjust.
 Identities = 53/191 (27%), Positives = 89/191 (46%), Gaps = 30/191 (15%)

Query: 56   ENLPVNYVLLTVTTNKP---RDLRVKYWLSNDYG-ERFSISRQ-GDISLMQCLDYETEDS 110
            E++P+  +++TV+ +     RD  ++Y + +  G   F I  + G I     LD+E+   
Sbjct: 1045 EDVPIGSLVMTVSAHDEDAGRDGEIRYSIRDGSGVGVFRIGEETGVIETSDRLDHESTSH 1104

Query: 111  YRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSV-IG 166
            Y  TV+ATD     +++   + I V +VND  P+   P   ++ P I   + +P  V + 
Sbjct: 1105 YWLTVFATDQGVVPLSSFMEIYIEVGDVNDNAPQTSEP---VYYPEI--MENSPKDVSVV 1159

Query: 167  KVEAADGDKGDRVTLSLRGPYEKMFSINDSGHISIVDLSALNTSTIQ-----------LV 215
            ++EA D D      L       K+ S N  G  SI   + L T+T +           L 
Sbjct: 1160 QIEAFDPDSSSSDKLMY-----KITSGNPQGFFSIHPKTGLITTTSRKLDREQQDEHILE 1214

Query: 216  VVATDTGNPPR 226
            V  TD+G+PP+
Sbjct: 1215 VTVTDSGSPPK 1225



 Score = 42.4 bits (98), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 46/161 (28%), Positives = 74/161 (45%), Gaps = 18/161 (11%)

Query: 76   RVKYWLSNDYGERFSIS-RQGDISLMQCLDYETEDSYRFTVYATDTL-MTTSATVNISVV 133
             + Y L     E+F ++   G++     LD E +  Y   V ATD       A+V +++ 
Sbjct: 3054 EITYTLLGSGAEKFKLNPDTGELRTSTPLDREEQAVYHLLVRATDGGGRFCQASVVLTLE 3113

Query: 134  NVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMF 191
            +VND  P F    Y + +      +  PG+++ +V+A D D G   ++  SL    +  F
Sbjct: 3114 DVNDSAPEFSADPYAITV----FENTEPGTLLTRVQATDADAGLNRKILYSLIDSADGQF 3169

Query: 192  SIND-SGHISI-----VDLSALNTSTIQLVVVATDTGNPPR 226
            SIN+ SG I +      +L A+ T    L + A D G P R
Sbjct: 3170 SINELSGIIQLEKPLDRELQAVYT----LSLKAVDQGLPRR 3206



 Score = 42.4 bits (98), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 55/215 (25%), Positives = 91/215 (42%), Gaps = 19/215 (8%)

Query: 24  DRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLR---VKYW 80
           DR     ++V   G +    +F++  Y  +  EN+P+   +++++   P +     V Y 
Sbjct: 442 DRKVSTKVLVKVLGANSNPPEFTQTAYKAAFDENVPIGTTVMSLSAVDPDEGENGYVTYS 501

Query: 81  LSNDYGERFSISR-QGDISLMQCLDYE-TEDSYRFTVYATDTLMTTSATVN----ISVVN 134
           ++N     F+I    G +S  + LDYE     Y   + A+D  +     V     I++ N
Sbjct: 502 IANLNHVPFAIDHFTGAVSTSENLDYELMPRVYTLRIRASDWGLPYRREVEVLATITLNN 561

Query: 135 VNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYE-KMFSI 193
           +ND  P F     E  +P     DL  G  I  V A D D+   V   +    E  +FS+
Sbjct: 562 LNDNTPLFEKINCEGTIPR----DLGVGEQITTVSAIDADELQLVQYQIEAGNELDLFSL 617

Query: 194 NDSGHI-----SIVDLSALNTSTIQLVVVATDTGN 223
           N +  +     S++D  A   S   L + ATD  N
Sbjct: 618 NPNSGVLSLKQSLMDGLAAKMSFHSLRITATDGEN 652



 Score = 41.6 bits (96), Expect = 0.70,   Method: Compositional matrix adjust.
 Identities = 55/195 (28%), Positives = 86/195 (44%), Gaps = 20/195 (10%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTTNKPRDL----RVKYWLSNDYGERFSI-SRQGDIS 98
            +F +  Y V   E+  V+  ++ V     +DL     V Y +  D  + FSI S  G + 
Sbjct: 821  EFLQESYFVEVSEDKEVHSEIIQVEATD-KDLGPNGHVTYSILTD-TDTFSIDSVTGVVK 878

Query: 99   LMQCLDYETEDSYRFTVYATDTL-----MTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
            + + LD E +  +   + A D       + ++  + +S+ +VND  P+F  P Y + +  
Sbjct: 879  IARPLDRELQHEHYLKIEARDQAREEPQLFSTVILKVSLEDVNDNPPKFIPPNYRVKV-- 936

Query: 154  IPLADLTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSIND-SGHISIV-DLSALNT 209
                DL  G+VI  +EA D D G   +V  SL    E  F ++  SG + IV  L     
Sbjct: 937  --REDLPEGTVIMWLEAHDPDLGQSGQVRYSLMDHGEGNFDVDKLSGAVRIVQQLDFEKK 994

Query: 210  STIQLVVVATDTGNP 224
                L V A D G P
Sbjct: 995  QVYNLTVRAKDKGKP 1009



 Score = 40.0 bits (92), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 43/162 (26%), Positives = 73/162 (45%), Gaps = 14/162 (8%)

Query: 45   FSKNEYSVSALENLPVNY-VLLTVTTNKPRDLRVKYWL-----SNDYGERFSISRQGDIS 98
            FS+  YSV   EN PV + VL  V T++        +       ND  + F +++QG + 
Sbjct: 3437 FSRGNYSVIIQENKPVGFSVLQLVVTDEDSSHNGPPFFFTIVTGNDE-KAFEVNQQGVLL 3495

Query: 99   LMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIP 155
                +  + +D Y   V   D     +++   V+I V+  + + P       E+F+    
Sbjct: 3496 TSSAIKRKEKDHYLLQVKVADNGKPQLSSLTYVDIRVIEESIYPPAIL--PLEIFI--TA 3551

Query: 156  LADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSG 197
              +   G VIGK+ A D D  D +T SL    + +FS++ +G
Sbjct: 3552 SGEEYSGGVIGKIHATDQDVYDTLTYSLDPQMDNLFSVSSTG 3593



 Score = 39.3 bits (90), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 57/127 (44%), Gaps = 19/127 (14%)

Query: 45   FSKNEYSVSALENLPVNYVLLT--------VTTNKPRD---LRVKYWLSNDYGERFSI-S 92
            F + EY+   +E+  +N V+LT          T+  +D   L V + +     + F+I S
Sbjct: 1762 FMQAEYTGLIVESASINSVVLTDRNVPLVIRATDADKDSNALLVYHIVEPSVHKYFAIDS 1821

Query: 93   RQGDISLMQCLDYETEDSYRFTVYATDT-----LMTTSATVNISVVNVNDWDPRFRYPQY 147
              G I  +  LDYE    + FTV   D          +A V + V+++ND  P F  P Y
Sbjct: 1822 STGAIHTVLSLDYEETSIFHFTVQVHDMGTPRLFAEYAANVTVHVIDINDCPPVFAKPLY 1881

Query: 148  E--LFLP 152
            E  L LP
Sbjct: 1882 EASLLLP 1888


>gi|50254108|gb|AAT72163.1| cadherin 23 isoform B1 [Mus musculus]
          Length = 1114

 Score = 64.3 bits (155), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 60/195 (30%), Positives = 92/195 (47%), Gaps = 20/195 (10%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWLSNDYGERFSIS-RQGDISLM 100
           F +  Y  +  E++ V  V+L VT           ++Y L +  G +F+I+   GDIS++
Sbjct: 162 FDQPSYQEAVFEDIAVGTVILRVTATDADSGNFALIEYSLVDGEG-KFAINPNTGDISVL 220

Query: 101 QCLDYETEDSYRFTVYATDT-------LMTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
             LD E +D Y  T  A D            S  V I V++VND  P+F  PQ+   +  
Sbjct: 221 SSLDREKKDHYILTALAKDNPGDVASNRRENSVQVVIRVLDVNDCRPQFSKPQFSTSV-- 278

Query: 154 IPLADLTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSIN-DSGHISIVDLSALNTS 210
               +   G+ +  + A D D+G   ++T SL GP  + FS++ DSG ++       +  
Sbjct: 279 --YENEPAGTSVITMLATDQDEGSNSQLTYSLEGPGMEAFSVDMDSGLVT-TQRPLQSYE 335

Query: 211 TIQLVVVATDTGNPP 225
              L VVATD G PP
Sbjct: 336 RFNLTVVATDGGEPP 350



 Score = 41.2 bits (95), Expect = 0.79,   Method: Compositional matrix adjust.
 Identities = 39/124 (31%), Positives = 62/124 (50%), Gaps = 15/124 (12%)

Query: 92  SRQGDISLMQCLDYETEDSYRFTVYATDTLMTTSAT---VNISVVNVNDWDPRFRYPQYE 148
           S  G +   + +DYE      FTV A+D      A    V + +V++ND +P F  P Y+
Sbjct: 109 SSAGKVIANRTVDYEEVHWLNFTVRASDNGSPPRAAEIPVYLEIVDINDNNPIFDQPSYQ 168

Query: 149 LFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-DSGHISIVDL 204
             +      D+  G+VI +V A D D G+   +    + G  E  F+IN ++G IS+  L
Sbjct: 169 EAV----FEDIAVGTVILRVTATDADSGNFALIEYSLVDG--EGKFAINPNTGDISV--L 220

Query: 205 SALN 208
           S+L+
Sbjct: 221 SSLD 224


>gi|336244961|gb|AEI28398.1| FAT tumor suppressor-like protein 4, partial [Podocnemis unifilis]
          Length = 254

 Score = 64.3 bits (155), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 53/191 (27%), Positives = 98/191 (51%), Gaps = 10/191 (5%)

Query: 45  FSKNEYSVSALENLPVNYVLLTV-TTNKPRDLRVKYWLS-NDYGERFSISR-QGDISLMQ 101
           FS+  YS    EN+ V Y + TV  ++   +  + Y ++  D    F+I++  G I+   
Sbjct: 4   FSQRVYSFVVFENVAVGYRVGTVFASSMDLNTNITYLITTGDQRGMFAINKLTGQITTAS 63

Query: 102 CLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTP 161
            +D E +  Y+  V A+   +T    VNI+V ++ND  P F +    + +    + +   
Sbjct: 64  VIDREEQAFYQLNVVASGGAITGDTLVNITVKDLNDNSPHFLHAVESVNV----VENWKA 119

Query: 162 GSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIND-SGHISIVDLSALNTSTIQLVVVA 218
           G  I + +A D D+G    V  SL+   + +F+I++ +G IS++ L  +N  + Q+ ++A
Sbjct: 120 GHTIFQAKAVDPDEGVNGMVLYSLKQNPKGLFTIDEQNGAISLIGLLDINAGSYQVEILA 179

Query: 219 TDTGNPPRQAS 229
           +D G P R +S
Sbjct: 180 SDMGVPQRSSS 190


>gi|198437132|ref|XP_002124366.1| PREDICTED: similar to KIAA0279 protein [Ciona intestinalis]
          Length = 2808

 Score = 64.3 bits (155), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 65/228 (28%), Positives = 104/228 (45%), Gaps = 18/228 (7%)

Query: 12  TLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNK 71
           T  V+A  + +  R A   + ++    +     F+ N Y     E++ +   ++ +    
Sbjct: 611 TFTVQASDHGSPRRTATTQVTINVRDVNDNAPYFTSNSYQKRVAEDMALKSPIINIEARD 670

Query: 72  P---RDLRVKYWL-SNDYGERFSI-SRQG--DISLMQCLDYETEDSYRFTVYATDTLMTT 124
           P     + + Y + + +   +FSI SR G   ISL + LDY  +  YR TV A+D  +  
Sbjct: 671 PDTDATISISYRIIAGNQDRKFSIISRNGIGKISLAKALDYNEQRHYRLTVEASDGSLKN 730

Query: 125 SATVNISVVNVNDWDPRFRYPQYELFLP-HIPLADLTPGSVIGKVEAADGDKGD--RVTL 181
           +  V I+V + N   P F    Y + LP ++P+     G ++ +V A DGD GD  R+T 
Sbjct: 731 TTFVYINVTDTNSHTPIFEPNYYPVTLPENVPI-----GHLVVQVHAVDGDIGDNARITY 785

Query: 182 SLRGPYEKMFSIN-DSGHISIVD-LSALNTSTIQLVVVATDTGNPPRQ 227
                    F IN ++G I     L   N S I L V+A D G PP +
Sbjct: 786 CFSDAVSN-FQINSNNGEIRTRQKLDFDNLSKIMLGVIARDNGIPPEE 832



 Score = 61.6 bits (148), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 67/210 (31%), Positives = 98/210 (46%), Gaps = 39/210 (18%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGER-FSISRQ-GDIS 98
           QF++ +Y+V   EN  VN ++  ++    +   +  V Y L +  G R F I+ Q G+IS
Sbjct: 433 QFTRAQYNVRVYENARVNSIIANISATDADSGMNGLVSYVLYS--GRRTFRINPQTGEIS 490

Query: 99  LMQCLDYETEDSYRFTVYATD----TLMTTSATVNISVVNVNDWDPRF-RYPQYELFLPH 153
           L+  LDYE    Y+  V ATD     L  TS  VN+ V+++ND  P F   P  ++ L  
Sbjct: 491 LIARLDYEVTKRYQLRVRATDNGRPALSNTSGLVNVQVLDINDNTPHFISSPYNKVVLES 550

Query: 154 IPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSGHISIVDLSALNTSTIQ 213
            P+     GS I +VEA DGD       +LR      ++I + G      +  L   TIQ
Sbjct: 551 APV-----GSKILQVEAEDGD-------ALRSSSRIAYTILNRGSPVPFRID-LQNGTIQ 597

Query: 214 L--------------VVVATDTGNPPRQAS 229
           L               V A+D G+P R A+
Sbjct: 598 LSQKLDHERQGSYTFTVQASDHGSPRRTAT 627



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 60/193 (31%), Positives = 84/193 (43%), Gaps = 20/193 (10%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGER-----FSISRQ-GDI 97
            F  + Y+   LE+ PV   +L V       LR    ++     R     F I  Q G I
Sbjct: 537 HFISSPYNKVVLESAPVGSKILQVEAEDGDALRSSSRIAYTILNRGSPVPFRIDLQNGTI 596

Query: 98  SLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHI 154
            L Q LD+E + SY FTV A+D      T +  V I+V +VND  P F    Y+  +   
Sbjct: 597 QLSQKLDHERQGSYTFTVQASDHGSPRRTATTQVTINVRDVNDNAPYFTSNSYQKRVAE- 655

Query: 155 PLADLTPGSVIGKVEAADGDKGDRVTLSLR---GPYEKMFSI---NDSGHISIVDLSALN 208
              D+   S I  +EA D D    +++S R   G  ++ FSI   N  G IS+      N
Sbjct: 656 ---DMALKSPIINIEARDPDTDATISISYRIIAGNQDRKFSIISRNGIGKISLAKALDYN 712

Query: 209 TST-IQLVVVATD 220
                +L V A+D
Sbjct: 713 EQRHYRLTVEASD 725



 Score = 42.7 bits (99), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 54/107 (50%), Gaps = 14/107 (13%)

Query: 77   VKYW-LSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNV 135
            ++YW L+ D GE         ++ +  LDYE + +Y F V A    + + ATV+I V + 
Sbjct: 1002 LRYWKLNPDTGE---------LATVDVLDYERKRNYTFIVSALSNELVSQATVHILVQDC 1052

Query: 136  NDWDPRFRYPQYELFLPH--IPLADLTPGSVIGKVEAADGDKGDRVT 180
            ND +P      +E+   +    L+D  P  VIG+V A D D  D +T
Sbjct: 1053 NDNNPVL--SDFEIVFNNYRTRLSDSFPVGVIGEVPAYDPDVSDTLT 1097


>gi|50254110|gb|AAT72164.1| cadherin 23 isoform B2 [Mus musculus]
          Length = 1079

 Score = 64.3 bits (155), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 60/195 (30%), Positives = 92/195 (47%), Gaps = 20/195 (10%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWLSNDYGERFSIS-RQGDISLM 100
           F +  Y  +  E++ V  V+L VT           ++Y L +  G +F+I+   GDIS++
Sbjct: 162 FDQPSYQEAVFEDIAVGTVILRVTATDADSGNFALIEYSLVDGEG-KFAINPNTGDISVL 220

Query: 101 QCLDYETEDSYRFTVYATDT-------LMTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
             LD E +D Y  T  A D            S  V I V++VND  P+F  PQ+   +  
Sbjct: 221 SSLDREKKDHYILTALAKDNPGDVASNRRENSVQVVIRVLDVNDCRPQFSKPQFSTSV-- 278

Query: 154 IPLADLTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSIN-DSGHISIVDLSALNTS 210
               +   G+ +  + A D D+G   ++T SL GP  + FS++ DSG ++       +  
Sbjct: 279 --YENEPAGTSVITMLATDQDEGSNSQLTYSLEGPGMEAFSVDMDSGLVT-TQRPLQSYE 335

Query: 211 TIQLVVVATDTGNPP 225
              L VVATD G PP
Sbjct: 336 RFNLTVVATDGGEPP 350



 Score = 41.2 bits (95), Expect = 0.75,   Method: Compositional matrix adjust.
 Identities = 39/124 (31%), Positives = 62/124 (50%), Gaps = 15/124 (12%)

Query: 92  SRQGDISLMQCLDYETEDSYRFTVYATDTLMTTSAT---VNISVVNVNDWDPRFRYPQYE 148
           S  G +   + +DYE      FTV A+D      A    V + +V++ND +P F  P Y+
Sbjct: 109 SSAGKVIANRTVDYEEVHWLNFTVRASDNGSPPRAAEIPVYLEIVDINDNNPIFDQPSYQ 168

Query: 149 LFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-DSGHISIVDL 204
             +      D+  G+VI +V A D D G+   +    + G  E  F+IN ++G IS+  L
Sbjct: 169 EAV----FEDIAVGTVILRVTATDADSGNFALIEYSLVDG--EGKFAINPNTGDISV--L 220

Query: 205 SALN 208
           S+L+
Sbjct: 221 SSLD 224


>gi|440903408|gb|ELR54072.1| Protocadherin Fat 1 [Bos grunniens mutus]
          Length = 4588

 Score = 64.3 bits (155), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 42/156 (26%), Positives = 79/156 (50%), Gaps = 11/156 (7%)

Query: 33   VSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYW---LSNDYGERF 89
            +SK   SL  + F ++ ++ + +E+ PV +++  ++   P    +  W   +  +Y   F
Sbjct: 1346 ISKPKPSLEPISFEESFFTFTVMESDPVAHMIGVISVEPPG---IPLWFDIIGGNYDSHF 1402

Query: 90   SISR-QGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYE 148
             + R  G I + + LD E + +Y  TV ATD   T    V I V++ ND  P+F   +YE
Sbjct: 1403 DVDRGTGTIIIAKPLDAEQKSNYNLTVEATDGTTTILTQVFIKVIDTNDHRPQFSTSKYE 1462

Query: 149  LFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR 184
            + +P     D  P + I ++ A D D+ +++  +L+
Sbjct: 1463 VVIPE----DTVPETEILQISAVDKDEKNKLIYTLQ 1494



 Score = 58.9 bits (141), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 57/199 (28%), Positives = 93/199 (46%), Gaps = 16/199 (8%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTT----NKPRDLRVKYWLSN-DYGERFSISR---QG 95
            +F+   Y  +  E+ P   V+  V+T    ++  + +V Y+++  D   +F+I     + 
Sbjct: 2917 RFTAEIYKGTVSEDDPPGGVIAIVSTTDADSEEINRQVTYYITGGDPLGQFAIENIQNEW 2976

Query: 96   DISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIP 155
             + + + LD E  DSY  T+ ATD   ++ A V + V++ ND  P      Y   +P   
Sbjct: 2977 KVYVKKPLDREERDSYLLTITATDGTFSSKAIVEVKVLDANDNTPVCEKTLYSDTIPE-- 3034

Query: 156  LADLTPGSVIGKVEAADGD--KGDRVTLSLRGPYEKMFSIN-DSGHISI-VDLSALNTST 211
              D  PG +I +V A D D      +T +L GP  + F +N D+G +     L     + 
Sbjct: 3035 --DAFPGKLIMQVSATDADIRSNAEITYTLFGPGAEKFKLNPDTGELKTSAPLDREEQAA 3092

Query: 212  IQLVVVATDTGNPPRQASV 230
              L+V ATD G    QASV
Sbjct: 3093 YHLLVKATDGGGRFCQASV 3111



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 63/225 (28%), Positives = 109/225 (48%), Gaps = 19/225 (8%)

Query: 13   LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVT---T 69
            L+V+A   D   R+  A+++++    +    +FS + Y+++  EN     +L  V     
Sbjct: 3095 LLVKAT--DGGGRFCQASVVLTLEDVNDNAPEFSADPYTITVFENTEPGTLLTRVQATDA 3152

Query: 70   NKPRDLRVKYWLSNDYGERFSISR-QGDISLMQCLDYETEDSYRFTVYATD----TLMTT 124
            +   + ++ Y L N    +FSI+   G I L + LD E +  Y  T+ A D      +T 
Sbjct: 3153 DAGLNRKISYSLLNSADGQFSINELSGIIQLEKPLDRELQAVYTLTLKAVDHGLPRRLTA 3212

Query: 125  SATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAA--DGDKGDRVTLS 182
            + T+ ISV+++ND  P F Y +Y   +      D+  G+ + +V AA  D +    +T S
Sbjct: 3213 TGTIVISVLDINDNPPVFEYREYGATVSE----DILIGTEVLQVYAASRDIEANAEITYS 3268

Query: 183  -LRGPYEKMFSIND-SGHISIVD-LSALNTSTIQLVVVATDTGNP 224
             + G     FSI+  +G I I++ L   ++    L V ATD G+P
Sbjct: 3269 IISGNEHGKFSIDSKTGAIFIIENLDYESSHEYYLTVEATDGGSP 3313



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 60/217 (27%), Positives = 101/217 (46%), Gaps = 18/217 (8%)

Query: 29   ATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWLSNDY 85
            A + V+  G +L    F +NEY V   EN P++ ++  V  +         V Y + ND+
Sbjct: 2476 AQVHVTVIGGNLHSPLFLQNEYEVELAENAPLHTLVTEVKASDGDSGIYGHVTYHIVNDF 2535

Query: 86   G-ERFSISRQGDISLMQCLDYET--EDSYRFTVYATDTLMTTS-ATVNISVVNVNDWDPR 141
              +RF  + +G I  ++ LD ET  E        A D     +  T+N+ + + ND  P+
Sbjct: 2536 AKDRFYTNERGQIFTLEKLDRETPAEKVIPIRFMAKDAGGKVAFCTINVILTDDNDNAPQ 2595

Query: 142  FRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDR--VTLSLRGPYEKM---FSIND- 195
            FR  ++E+ +     ++   G+ + KV A+D D+G    +T ++    E +     IN  
Sbjct: 2596 FRATKFEVNIG----SNAPKGTSVIKVLASDADEGSNADITYAIEADSESVKENLEINRA 2651

Query: 196  SGHISIVD-LSALNTSTIQLVVVATDTGNPPRQASVP 231
            SG I+  + L  L        V A D G+P R++ VP
Sbjct: 2652 SGVITTKESLIGLENEVFTFFVRAVDNGSPQRESVVP 2688



 Score = 54.3 bits (129), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 66/239 (27%), Positives = 115/239 (48%), Gaps = 23/239 (9%)

Query: 5    DDFLQPI-TLVVRAIQYDNQDRY-ALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNY 62
            D  LQ + TL ++A+ +    R  A  T+++S    +     F   EY  +  E++ +  
Sbjct: 3188 DRELQAVYTLTLKAVDHGLPRRLTATGTIVISVLDINDNPPVFEYREYGATVSEDILIGT 3247

Query: 63   VLLTVTTNKPRDLRVKYWLS------NDYGERFSI-SRQGDISLMQCLDYETEDSYRFTV 115
             +L V     RD+     ++      N++G +FSI S+ G I +++ LDYE+   Y  TV
Sbjct: 3248 EVLQVYAAS-RDIEANAEITYSIISGNEHG-KFSIDSKTGAIFIIENLDYESSHEYYLTV 3305

Query: 116  YATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAAD 172
             ATD     ++  ATV+I+V ++ND  P F    Y   +    + + +  +V+   + AD
Sbjct: 3306 EATDGGSPSLSDVATVSINVTDINDNAPVFSQDTYTAVVSEDAVLEQSVITVMA--DDAD 3363

Query: 173  GDKGDRVTLS-LRGPYEKMFSINDS-GHISIVDLSALNTSTIQ---LVVVATDTGNPPR 226
            G     +  + + G     F+I+ + G + +  L  L+  TI    L V A+D G+PPR
Sbjct: 3364 GPSNSHIHYAIIDGNQGSPFTIDPARGEVKVTKL--LDRETISGYTLTVQASDNGSPPR 3420



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 56/196 (28%), Positives = 92/196 (46%), Gaps = 23/196 (11%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLS-NDYGERFSIS-RQGDISLMQC 102
            F K  YS    EN  ++  ++ V  N P  L+V Y ++  D   +F+++   G IS++  
Sbjct: 2182 FEKPFYSAEIPENAQLHSPVVHVQANSPEGLKVHYSITEGDPFSQFTVNFNTGVISVVAP 2241

Query: 103  LDYETEDSYRFTVYATDTLMTTSATVNISVV--NVNDWDPRFRYPQYELFLPHIPLADLT 160
            LD+E+  +Y+ ++ ATD+L    A V + ++  ++ND  P F    Y           L+
Sbjct: 2242 LDFESHPAYKLSIRATDSLTGAHAEVFVDIIVEDINDNPPVFAQQSY--------ATTLS 2293

Query: 161  PGSVIG----KVEAADGDK--GDRVTLSLRGPYEK---MFSIND-SGHISIVD-LSALNT 209
              SVIG    +V A D D      ++  + G + K    F ++  +G IS+V  L     
Sbjct: 2294 EASVIGTSVVQVRATDADSEPNRGISYHMVGNHSKSHDHFHVDSGTGLISLVRTLDYEQF 2353

Query: 210  STIQLVVVATDTGNPP 225
               Q+ V A D G PP
Sbjct: 2354 RQHQISVRAVDGGMPP 2369



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 56/237 (23%), Positives = 101/237 (42%), Gaps = 37/237 (15%)

Query: 11   ITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTN 70
             T  VRA+   +  R ++  + V      +R  +FS+  Y+ +  E++P+   +  +   
Sbjct: 2669 FTFFVRAVDNGSPQRESVVPVYVKVLPPEMRLPRFSEPFYTYTVSEDVPIGTEIDLIRAE 2728

Query: 71   KPRDLRVKYWLSN----DYGERFSISRQ-GDISLMQCLDYETEDSYRFTVYAT----DTL 121
                +       N    +  E F I RQ G + L + LD+ET   ++F+V A     D  
Sbjct: 2729 HSGTVLYSLVKGNTPESNRDEFFVIDRQSGRLKLEKSLDHETTKWFQFSVLARCTHGDYE 2788

Query: 122  MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTL 181
            +  S  V+I V + ND  P      YE F+    + +L  GS + ++ A+D D G    +
Sbjct: 2789 LVASVDVSIQVKDANDNSPVLESSPYEAFI----VENLPAGSRVIQIRASDLDSGSNGQV 2844

Query: 182  SLRGPYEKMFSINDSGHISIVDLSALNTST----------------IQLVVVATDTG 222
                    M++++ S  + +++  A+N  T                 Q+ VVA+D G
Sbjct: 2845 --------MYNLDQSQSVDVIESFAVNMETGWITTLRELDHEKRDSYQIKVVASDHG 2893



 Score = 47.4 bits (111), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 41/137 (29%), Positives = 68/137 (49%), Gaps = 16/137 (11%)

Query: 50   YSVSALENLPVNYVLLTVTT---NKPRDLRVKYWL----SNDYGERFSISRQ-GDISLMQ 101
            Y    +ENLP    ++ +     +   + +V Y L    S D  E F+++ + G I+ ++
Sbjct: 2814 YEAFIVENLPAGSRVIQIRASDLDSGSNGQVMYNLDQSQSVDVIESFAVNMETGWITTLR 2873

Query: 102  CLDYETEDSYRFTVYATD----TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLA 157
             LD+E  DSY+  V A+D      ++++A V+++V +VND  PRF    Y+  +      
Sbjct: 2874 ELDHEKRDSYQIKVVASDHGEKVQLSSTAIVDVTVTDVNDSPPRFTAEIYKGTVSE---- 2929

Query: 158  DLTPGSVIGKVEAADGD 174
            D  PG VI  V   D D
Sbjct: 2930 DDPPGGVIAIVSTTDAD 2946



 Score = 44.3 bits (103), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 54/195 (27%), Positives = 87/195 (44%), Gaps = 20/195 (10%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTTNKPRDL----RVKYWLSNDYGERFSI-SRQGDIS 98
            +F +  Y V   E+  +N  ++ V     +DL     V+Y +  D  ++FSI S  G + 
Sbjct: 821  EFLQESYFVEVSEDKEINSEIIQVEATD-KDLGPNGHVRYSILTD-TDKFSIDSVTGVVK 878

Query: 99   LMQCLDYETEDSYRFTVYATDTL-----MTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
            ++  LD E    +   V A D       + ++  + +S+ +VND  P+F  P Y + +  
Sbjct: 879  ILNPLDREEHQVHYLKVEARDQAREEPQLLSTVILKVSLDDVNDNPPKFIPPNYRVKV-- 936

Query: 154  IPLADLTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSIND-SGHISIV-DLSALNT 209
                DL  G++I  +EA D D G   +V  SL    E  F ++  SG + I+  L     
Sbjct: 937  --REDLPEGTIIMWLEAHDPDLGQSSQVRYSLLDHGEGNFDVDKLSGAVRIIQQLDFEKK 994

Query: 210  STIQLVVVATDTGNP 224
                L V A D G P
Sbjct: 995  QVYNLTVRAKDKGKP 1009



 Score = 43.1 bits (100), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 34/115 (29%), Positives = 56/115 (48%), Gaps = 8/115 (6%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNK---PRDLRVKYWL-SNDYGERFSIS-RQGDISL 99
            FS++ Y+    E+  +   ++TV  +    P +  + Y +   + G  F+I   +G++ +
Sbjct: 3335 FSQDTYTAVVSEDAVLEQSVITVMADDADGPSNSHIHYAIIDGNQGSPFTIDPARGEVKV 3394

Query: 100  MQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFL 151
             + LD ET   Y  TV A+D       T+ TVNI V +VND  P F    Y L +
Sbjct: 3395 TKLLDRETISGYTLTVQASDNGSPPRVTTTTVNIDVSDVNDNAPVFSRENYSLII 3449



 Score = 41.2 bits (95), Expect = 0.89,   Method: Compositional matrix adjust.
 Identities = 35/121 (28%), Positives = 59/121 (48%), Gaps = 9/121 (7%)

Query: 83   NDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRF 142
            ND+       + G I+L     +  + SY   V A+D +  +SA V+++V+  N   P F
Sbjct: 2433 NDHKNFVIDGKTGIITLSNLRRHALKPSYSLQVSASDGVFRSSAQVHVTVIGGNLHSPLF 2492

Query: 143  RYPQYELFLPHIPLADLTP-GSVIGKVEAADGDKG--DRVTLSLRGPYEK-MFSINDSGH 198
               +YE     + LA+  P  +++ +V+A+DGD G    VT  +   + K  F  N+ G 
Sbjct: 2493 LQNEYE-----VELAENAPLHTLVTEVKASDGDSGIYGHVTYHIVNDFAKDRFYTNERGQ 2547

Query: 199  I 199
            I
Sbjct: 2548 I 2548



 Score = 41.2 bits (95), Expect = 0.94,   Method: Compositional matrix adjust.
 Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 14/162 (8%)

Query: 45   FSKNEYSVSALENLPVNYVLL--TVTTNKPRDLRVKYWLS----NDYGERFSISRQGDIS 98
            FS+  YS+   EN P+ + +L   VT          ++ S    N+ G  F +++QG + 
Sbjct: 3440 FSRENYSLIIQENKPMGFSVLQLVVTDRDSSHNGPPFFFSIVSGNEEGA-FEVNQQGALL 3498

Query: 99   LMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIP 155
                ++ + +D Y   V   D     +++   ++I V+  + + P       E+F+    
Sbjct: 3499 TAATINRKVKDHYLLHVKVADNGKPQLSSLTYIDIRVIEESVYPPAIL--PLEIFI--TA 3554

Query: 156  LADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSG 197
              +   G VIGK+ A D D  D +T SL    + +FS++ +G
Sbjct: 3555 FGEEYSGGVIGKIHATDQDVYDTLTYSLDPQMDSLFSVSSTG 3596



 Score = 40.8 bits (94), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 54/191 (28%), Positives = 83/191 (43%), Gaps = 30/191 (15%)

Query: 56   ENLPVNYVLLTVTTNKP---RDLRVKYWLSNDYG-ERFSISRQ-GDISLMQCLDYETEDS 110
            EN P+   ++ V+       RD  + Y + +  G   F I  + G I     LD E+   
Sbjct: 1045 ENAPLGSSVMKVSARDEDMGRDGEIHYSIRDGSGVGVFRIDEETGVIETSDRLDRESTSH 1104

Query: 111  YRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSV-IG 166
            Y  TVYA+D     +++   V I V +VND  P+   P   ++ P I   + +P  V + 
Sbjct: 1105 YWLTVYASDQGVVPLSSFVEVYIEVEDVNDNAPQTSEP---VYYPEI--MENSPKDVSVV 1159

Query: 167  KVEAADGDKGDRVTLSLRGPYEKMFSINDSGHISIVDLSALNTSTIQ-----------LV 215
            ++EA D D      L+      K+ S N  G  SI   + L T+T +           L 
Sbjct: 1160 QIEAFDPDSSSDDKLTY-----KITSGNPQGFFSINSKTGLITTTARKLDREQQDEHILE 1214

Query: 216  VVATDTGNPPR 226
            V  TD G+PP+
Sbjct: 1215 VTVTDNGSPPK 1225


>gi|426365080|ref|XP_004049616.1| PREDICTED: cadherin-23-like [Gorilla gorilla gorilla]
          Length = 1049

 Score = 64.3 bits (155), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 59/195 (30%), Positives = 90/195 (46%), Gaps = 20/195 (10%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWLSNDYGERFSIS-RQGDISLM 100
           F +  Y  +  E++PV  ++LTVT           ++Y L  D   +F+I+   GDI ++
Sbjct: 162 FDQPSYQEAVFEDVPVGTIILTVTATDADSGNFALIEYSLG-DGESKFAINPTTGDIYVL 220

Query: 101 QCLDYETEDSYRFTVYATDT-------LMTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
             LD E +D Y  T  A D            S  V I V++VND  P+F  PQ+   +  
Sbjct: 221 SSLDREKKDHYILTALAKDNPGDVASNRRENSVQVVIQVLDVNDCRPQFSKPQFSTSV-- 278

Query: 154 IPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIN-DSGHISIVDLSALNTS 210
               +   G+ +  + A D D+G    +T SL GP  + F ++ DSG ++       +  
Sbjct: 279 --YENEPAGTSVITMMATDQDEGPNGELTYSLEGPGVEAFHVDMDSGLVT-TQRPLQSYE 335

Query: 211 TIQLVVVATDTGNPP 225
              L VVATD G PP
Sbjct: 336 RFNLTVVATDGGEPP 350



 Score = 39.7 bits (91), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 32/107 (29%), Positives = 49/107 (45%), Gaps = 8/107 (7%)

Query: 92  SRQGDISLMQCLDYETEDSYRFTVYATDTLMTTSAT---VNISVVNVNDWDPRFRYPQYE 148
           S  G +   + +DYE      FTV A+D      A    V + +V++ND +P F  P Y+
Sbjct: 109 SSAGKVIANRTVDYEEVHWLNFTVRASDNGSPPRAAEIPVYLEIVDINDNNPIFDQPSYQ 168

Query: 149 LFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSIN 194
             +      D+  G++I  V A D D G+   +    G  E  F+IN
Sbjct: 169 EAV----FEDVPVGTIILTVTATDADSGNFALIEYSLGDGESKFAIN 211



 Score = 38.9 bits (89), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 34/125 (27%), Positives = 56/125 (44%), Gaps = 21/125 (16%)

Query: 125 SATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLS 182
           +A + ++V++VND  P+F+      ++  I L   TPG+ +  V A D DKG    VT +
Sbjct: 36  NAKLTVNVLDVNDNTPQFKPFGITYYMERI-LEGATPGTTLIAVAAVDPDKGLNGLVTYT 94

Query: 183 LRGPYEKMFSINDSGHISIVDLSA-----------LNTSTIQLVVVATDTGNPPRQASVP 231
           L         +   G++ + D SA                +   V A+D G+PPR A +P
Sbjct: 95  L-------LDLVPPGYVQLEDSSAGKVIANRTVDYEEVHWLNFTVRASDNGSPPRAAEIP 147

Query: 232 AIMHF 236
             +  
Sbjct: 148 VYLEI 152


>gi|336244971|gb|AEI28403.1| FAT tumor suppressor-like protein 4, partial [Carettochelys
           insculpta]
          Length = 254

 Score = 64.3 bits (155), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 53/191 (27%), Positives = 97/191 (50%), Gaps = 10/191 (5%)

Query: 45  FSKNEYSVSALENLPVNYVLLTV-TTNKPRDLRVKYWLS-NDYGERFSISR-QGDISLMQ 101
           F++  YS    EN+ + Y + TV  +    +  + Y ++  D    F+I++  G I+   
Sbjct: 4   FNQGVYSFVVFENVALGYHVGTVFASTMDLNTNITYLITTGDQRGMFTINKVTGQIATAS 63

Query: 102 CLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTP 161
            LD E +  Y+  V A+   +T  ATVNI V ++ND  P F +    + +    + +   
Sbjct: 64  ILDREEQAFYQLKVVASGGAITGDATVNIIVKDLNDNSPHFLHAVESVNV----VENWKA 119

Query: 162 GSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIND-SGHISIVDLSALNTSTIQLVVVA 218
           G  I + +A D D+G    ++ SL+   + +F+IN+ +G IS+  L  +N  + Q+ ++A
Sbjct: 120 GHTIYQAKAVDPDEGVNGMISYSLKQNPKGLFTINEQNGAISLTGLLDINAGSYQVEILA 179

Query: 219 TDTGNPPRQAS 229
           +D G P   +S
Sbjct: 180 SDMGVPQHSSS 190


>gi|85725305|gb|ABC79270.1| protocadherin-15-CD2 isoform 3 [Mus musculus]
          Length = 1162

 Score = 64.3 bits (155), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 61/195 (31%), Positives = 99/195 (50%), Gaps = 14/195 (7%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGER-FSISRQ-GDISLMQ 101
           +F +  YS+   E + +  +LL +         + Y + N   +R F++S   G +SL +
Sbjct: 259 RFPQLMYSLEVSEAMRIGAILLNLQATDREGDPITYAIENGDPQRVFNLSETTGILSLGK 318

Query: 102 CLDYETEDSYRFTVYATDTL--MTTSATVNISVVNVNDWDPRFRYPQYELFLP-HIPLAD 158
            LD E+ D Y   V A+D     T++ATVNI V +VND  P F     + +LP ++ + +
Sbjct: 319 ALDRESTDRYILIVTASDGRPDGTSTATVNIVVTDVNDNAPVF-----DPYLPRNLSVVE 373

Query: 159 LTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDSGHI-SIVDLSALNTSTIQLV 215
               + +G+V A D D G   +V  SL G +  +F I  +G I + V L+       +LV
Sbjct: 374 EEANAFVGQVRATDPDAGINGQVHYSL-GNFNNLFRITSNGSIYTAVKLNREARDHYELV 432

Query: 216 VVATDTGNPPRQASV 230
           VVATD    PR +++
Sbjct: 433 VVATDGAVHPRHSTL 447



 Score = 48.5 bits (114), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 44/161 (27%), Positives = 77/161 (47%), Gaps = 20/161 (12%)

Query: 79  YWLSNDYGERFSISRQG---DISLMQCLDYETEDSYRFTVYATDTLMTTS-ATVNISVVN 134
           +   NDY   F+++  G    ++L+Q +D E + +Y F + A D +  +    VNI V++
Sbjct: 86  HLFLNDYTSVFTVTPTGITRYLTLLQPVDREEQQTYTFLITAFDGVQESEPVVVNIRVMD 145

Query: 135 VNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKM---- 190
            ND  P F    Y++++      D++PG  + ++ A D D+G    +S    YE +    
Sbjct: 146 ANDNTPTFPEISYDVYV----YTDMSPGDSVIQLTAVDADEGSNGEIS----YEILVGGK 197

Query: 191 --FSIND-SGHISIV-DLSALNTSTIQLVVVATDTGNPPRQ 227
             F IN  +G +SI   +  +   T  L V A+D   P  +
Sbjct: 198 GDFVINKTTGLVSIAPGVELIVGQTYALTVQASDNAPPAER 238



 Score = 47.8 bits (112), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 63/201 (31%), Positives = 93/201 (46%), Gaps = 26/201 (12%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRDL--RVKYWL-SNDYGERFSISR-QGDISLM 100
           F+ + Y+V   ENLP     L +   K  DL   V Y + S +    F++    G++SL+
Sbjct: 463 FTNSTYTVVVEENLPAGTSFLQIEA-KDVDLGANVSYRIRSPEVKHLFALHPFTGELSLL 521

Query: 101 QCLDYET----EDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
           + LDYE     E S  F   A D   T+    ATV + V ++ND+ P F    Y+  +  
Sbjct: 522 RSLDYEAFPDQEASITFLAEAFDIYGTMPPGIATVTVIVKDMNDYPPVFSKRIYKGMV-- 579

Query: 154 IPLADLTPGSVIGKVEAADGDK----GDRVTL---SLRGPY-EKMFSIN-DSGHI-SIVD 203
               D   G+ I  V A D D       RV      ++ PY   +F +  DSG + + V+
Sbjct: 580 --APDAVKGTPITTVYAEDADPPGMPASRVRYRVDDVQFPYPASIFDVEEDSGRVVTRVN 637

Query: 204 LSALNTSTIQLVVVATDTGNP 224
           L+   T+  +LVVVA D G P
Sbjct: 638 LNEEPTTIFKLVVVAFDDGEP 658


>gi|5832711|dbj|BAA84070.1| Flamingo 1 [Mus musculus]
          Length = 2920

 Score = 64.3 bits (155), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 67/219 (30%), Positives = 102/219 (46%), Gaps = 22/219 (10%)

Query: 25  RYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWL 81
           R ALATL +    T+  +  F + EY  S  ENL V Y +LTV     + P +  + Y L
Sbjct: 269 RSALATLTILVTDTNDHDPVFEQQEYKESLRENLEVGYEVLTVRATDGDAPPNANILYRL 328

Query: 82  SNDYGER----FSIS-RQGDISLMQCLDYETEDSYRFTVYATDT-----LMTTSATVNIS 131
               G+     F I  R G I     +D E  +SY+ TV A+D        +++A V +S
Sbjct: 329 LEGAGDSPSDAFEIDPRSGVIRTRGPVDREEVESYKLTVEASDQGRDPGPRSSTAIVFLS 388

Query: 132 VVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYE 188
           V + ND  P+F   +Y + +      D+TPG+ + +V A+D DKG    +    + G   
Sbjct: 389 VEDDNDNAPQFSEKRYVVQV----REDVTPGAPVLRVTASDRDKGSNALVHYSIMSGNAR 444

Query: 189 KMFSIN-DSGHISIVD-LSALNTSTIQLVVVATDTGNPP 225
             F ++  +G + +V  L    T    L + A D G PP
Sbjct: 445 GQFYLDAQTGALDVVSPLDYETTKEYTLRIRAQDGGRPP 483



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 48/171 (28%), Positives = 79/171 (46%), Gaps = 15/171 (8%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGERFSIS---RQGDIS 98
           F    +  + LE++P+ Y++L V     +   + R++Y L+   G  F  +     G IS
Sbjct: 506 FVSTPFQATVLESVPLGYLVLHVQAIDADAGDNARLEYSLAG-VGHDFPFTINNGTGWIS 564

Query: 99  LMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIP 155
           +   LD E  D Y F V A D     +T SA+V++++++VND +P F  P+Y + L    
Sbjct: 565 VAAELDREEVDFYSFGVEARDHGTPALTASASVSVTILDVNDNNPTFTQPEYTVRLNE-- 622

Query: 156 LADLTPGSVIGKVEAADGDKGDRVTLSL-RGPYEKMFSINDSGHISIVDLS 205
             D   G+ +  V A D      +T  +  G     FSI       +V L+
Sbjct: 623 --DAAVGTSVVTVSAVDRHAHSVITYQITSGNTRNRFSITSQSGGGLVSLA 671



 Score = 44.7 bits (104), Expect = 0.084,   Method: Compositional matrix adjust.
 Identities = 40/149 (26%), Positives = 69/149 (46%), Gaps = 10/149 (6%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWL-SNDYGERFSIS-RQGDISL 99
            F ++E+ V   EN P+   +  VT   P +    ++ Y +   +  E F +    G+++ 
Sbjct: 922  FEQDEFDVFVEENSPIGLAVARVTATDPDEGTNAQIMYQIVEGNIPEVFQLDIFSGELTA 981

Query: 100  MQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPH--IPLA 157
            +  LDYE    Y   + AT   + + ATV++ +++ ND  P      +E+   +     +
Sbjct: 982  LVDLDYEDRPEYVLVIQATSAPLVSRATVHVRLLDRNDNPPVLG--NFEILFNNYVTNRS 1039

Query: 158  DLTPGSVIGKVEAADGDKGDRVTLSL-RG 185
               PG  IG+V A D D  D +T S  RG
Sbjct: 1040 SSFPGGAIGRVPAHDPDISDSLTYSFERG 1068



 Score = 43.5 bits (101), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 48/188 (25%), Positives = 85/188 (45%), Gaps = 12/188 (6%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTT-NKPRDLRVKYWL-SNDYGERFSISRQ---GDISL 99
           F++ EY+V   E+  V   ++TV+  ++     + Y + S +   RFSI+ Q   G +SL
Sbjct: 611 FTQPEYTVRLNEDAAVGTSVVTVSAVDRHAHSVITYQITSGNTRNRFSITSQSGGGLVSL 670

Query: 100 MQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADL 159
              LDY+ E  Y   V A+D     +A + ++V + N   P F+   Y +        D 
Sbjct: 671 ALPLDYKLERQYVLAVTASDGTRQDTAQIVVNVTDANTHRPVFQSSHYTVNGNE----DR 726

Query: 160 TPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSINDSGHISI-VDLSALNTSTIQLVV 216
             G+ +  + A D D G+  R+T  +     +     D+G ++   +L   +  +  L +
Sbjct: 727 PAGTTVVLISATDEDTGENARITYFMEDSIPQFRIDGDTGAVTTQAELDYEDQVSYTLAI 786

Query: 217 VATDTGNP 224
            A D G P
Sbjct: 787 TARDNGIP 794


>gi|296472443|tpg|DAA14558.1| TPA: FAT tumor suppressor homolog 1-like [Bos taurus]
          Length = 4588

 Score = 64.3 bits (155), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 42/156 (26%), Positives = 79/156 (50%), Gaps = 11/156 (7%)

Query: 33   VSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYW---LSNDYGERF 89
            +SK   SL  + F ++ ++ + +E+ PV +++  ++   P    +  W   +  +Y   F
Sbjct: 1346 ISKPKPSLEPISFEESFFTFTVMESDPVAHMIGVISVEPPG---IPLWFDIIGGNYDSHF 1402

Query: 90   SISR-QGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYE 148
             + R  G I + + LD E + +Y  TV ATD   T    V I V++ ND  P+F   +YE
Sbjct: 1403 DVDRGTGTIIIAKPLDAEQKSNYNLTVEATDGTTTILTQVFIKVIDTNDHRPQFSTSKYE 1462

Query: 149  LFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR 184
            + +P     D  P + I ++ A D D+ +++  +L+
Sbjct: 1463 VVIPE----DTVPETEILQISAVDKDEKNKLIYTLQ 1494



 Score = 58.9 bits (141), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 57/199 (28%), Positives = 93/199 (46%), Gaps = 16/199 (8%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTT----NKPRDLRVKYWLSN-DYGERFSISR---QG 95
            +F+   Y  +  E+ P   V+  V+T    ++  + +V Y+++  D   +F+I     + 
Sbjct: 2917 RFTAEIYKGTVSEDDPPGGVIAIVSTTDADSEEINRQVTYYITGGDPLGQFAIENIQNEW 2976

Query: 96   DISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIP 155
             + + + LD E  DSY  T+ ATD   ++ A V + V++ ND  P      Y   +P   
Sbjct: 2977 KVYVKKPLDREERDSYLLTITATDGTFSSKAIVEVKVLDANDNTPVCEKTLYSDTIPE-- 3034

Query: 156  LADLTPGSVIGKVEAADGD--KGDRVTLSLRGPYEKMFSIN-DSGHISI-VDLSALNTST 211
              D  PG +I +V A D D      +T +L GP  + F +N D+G +     L     + 
Sbjct: 3035 --DAFPGKLIMQVSATDADIRSNAEITYTLFGPGAEKFKLNPDTGELKTSAPLDREEQAA 3092

Query: 212  IQLVVVATDTGNPPRQASV 230
              L+V ATD G    QASV
Sbjct: 3093 YHLLVKATDGGGRFCQASV 3111



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 63/225 (28%), Positives = 108/225 (48%), Gaps = 19/225 (8%)

Query: 13   LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVT---T 69
            L+V+A   D   R+  A+++++    +    +FS + Y+++  EN     +L  V     
Sbjct: 3095 LLVKAT--DGGGRFCQASVVLTLEDVNDNAPEFSADPYTITVFENTEPGTLLTRVQATDA 3152

Query: 70   NKPRDLRVKYWLSNDYGERFSISR-QGDISLMQCLDYETEDSYRFTVYATD----TLMTT 124
            +   + ++ Y L N    +FSI+   G I L + LD E +  Y  T+ A D      +T 
Sbjct: 3153 DAGLNRKISYSLLNSADGQFSINELSGIIQLEKPLDRELQAVYTLTLKAVDHGLPRRLTA 3212

Query: 125  SATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAA--DGDKGDRVTLS 182
            + T+ ISV+++ND  P F Y +Y   +      D+  G+ + +V AA  D +    +T S
Sbjct: 3213 TGTIVISVLDINDNPPVFEYREYGATVSE----DILIGTEVLQVYAASRDIEANAEITYS 3268

Query: 183  -LRGPYEKMFSIND-SGHISIVD-LSALNTSTIQLVVVATDTGNP 224
             + G     FSI+  +G I I++ L   ++    L V ATD G P
Sbjct: 3269 IISGNEHGKFSIDSKTGAIFIIENLDYESSHEYYLTVEATDGGTP 3313



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 60/217 (27%), Positives = 100/217 (46%), Gaps = 18/217 (8%)

Query: 29   ATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWLSNDY 85
            A + V+  G +L    F +NEY V   EN P++ ++  V  +         V Y + ND+
Sbjct: 2476 AQVHVTVIGGNLHSPLFLQNEYEVELAENAPLHTLVTEVKASDGDSGIYGHVTYHIVNDF 2535

Query: 86   G-ERFSISRQGDISLMQCLDYET--EDSYRFTVYATDTLMTTS-ATVNISVVNVNDWDPR 141
              +RF  + +G I  ++ LD ET  E        A D     +  T+N+ + + ND  P+
Sbjct: 2536 AKDRFYTNERGQIFTLEKLDRETPAEKVIPIRFMAKDAGGKVAFCTINVILTDDNDNAPQ 2595

Query: 142  FRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDR--VTLSLRGPYEKM---FSIND- 195
            FR  ++E+ +     +    G+ + KV A+D D+G    +T ++    E +     IN  
Sbjct: 2596 FRATKFEVNIG----SSAPKGTSVIKVLASDADEGSNADITYAIEADSESVKENLEINRA 2651

Query: 196  SGHISIVD-LSALNTSTIQLVVVATDTGNPPRQASVP 231
            SG I+  + L  L        V A D G+P R++ VP
Sbjct: 2652 SGVITTKESLIGLENEVFTFFVRAVDNGSPQRESVVP 2688



 Score = 54.3 bits (129), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 66/239 (27%), Positives = 115/239 (48%), Gaps = 23/239 (9%)

Query: 5    DDFLQPI-TLVVRAIQYDNQDRY-ALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNY 62
            D  LQ + TL ++A+ +    R  A  T+++S    +     F   EY  +  E++ +  
Sbjct: 3188 DRELQAVYTLTLKAVDHGLPRRLTATGTIVISVLDINDNPPVFEYREYGATVSEDILIGT 3247

Query: 63   VLLTVTTNKPRDLRVKYWLS------NDYGERFSI-SRQGDISLMQCLDYETEDSYRFTV 115
             +L V     RD+     ++      N++G +FSI S+ G I +++ LDYE+   Y  TV
Sbjct: 3248 EVLQVYAAS-RDIEANAEITYSIISGNEHG-KFSIDSKTGAIFIIENLDYESSHEYYLTV 3305

Query: 116  YATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAAD 172
             ATD     ++  ATV+I+V ++ND  P F    Y   +    + + +  +V+   + AD
Sbjct: 3306 EATDGGTPSLSDVATVSINVTDINDNAPVFSQDTYTAVVSEDAVLEQSVITVMA--DDAD 3363

Query: 173  GDKGDRVTLS-LRGPYEKMFSINDS-GHISIVDLSALNTSTIQ---LVVVATDTGNPPR 226
            G     +  + + G     F+I+ + G + +  L  L+  TI    L V A+D G+PPR
Sbjct: 3364 GPSNSHIHYAIIDGNQGSPFTIDPARGEVKVTKL--LDRETISGYTLTVQASDNGSPPR 3420



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 56/196 (28%), Positives = 92/196 (46%), Gaps = 23/196 (11%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLS-NDYGERFSIS-RQGDISLMQC 102
            F K  YS    EN  ++  ++ V  N P  L+V Y ++  D   +F+++   G IS++  
Sbjct: 2182 FEKPFYSAEIPENAQLHSPVVHVQANSPEGLKVHYSITEGDPFSQFTVNFNTGVISVVAP 2241

Query: 103  LDYETEDSYRFTVYATDTLMTTSATVNISVV--NVNDWDPRFRYPQYELFLPHIPLADLT 160
            LD+E+  +Y+ ++ ATD+L    A V + ++  ++ND  P F    Y           L+
Sbjct: 2242 LDFESHPAYKLSIRATDSLTGAHAEVFVDIIVEDINDNPPVFAQQSY--------ATTLS 2293

Query: 161  PGSVIG----KVEAADGDK--GDRVTLSLRGPYEK---MFSIND-SGHISIVD-LSALNT 209
              SVIG    +V A D D      ++  + G + K    F ++  +G IS+V  L     
Sbjct: 2294 EASVIGTSVVQVRATDADSEPNRGISYHMVGNHSKSHDHFHVDSGTGLISLVRTLDYEQF 2353

Query: 210  STIQLVVVATDTGNPP 225
               Q+ V A D G PP
Sbjct: 2354 RQHQISVRAVDGGMPP 2369



 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 56/237 (23%), Positives = 101/237 (42%), Gaps = 37/237 (15%)

Query: 11   ITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTN 70
             T  VRA+   +  R ++  + V      +R  +FS+  Y+ +  E++P+   +  +   
Sbjct: 2669 FTFFVRAVDNGSPQRESVVPVYVKVLPPEMRLPRFSEPFYTYTVSEDVPIGTEIDLIRAE 2728

Query: 71   KPRDLRVKYWLSN----DYGERFSISRQ-GDISLMQCLDYETEDSYRFTVYAT----DTL 121
                +       N    +  E F I RQ G + L + LD+ET   ++F+V A     D  
Sbjct: 2729 HSGTVLYSLVKGNTPESNRDEFFVIDRQSGRLKLEKSLDHETTKWFQFSVLARCTHGDYE 2788

Query: 122  MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTL 181
            +  S  V+I V + ND  P      YE F+    + +L  GS + ++ A+D D G    +
Sbjct: 2789 LVASVDVSIQVKDTNDNSPVLESSPYEAFI----VENLPAGSRVIQIRASDLDSGSNGQV 2844

Query: 182  SLRGPYEKMFSINDSGHISIVDLSALNTST----------------IQLVVVATDTG 222
                    M++++ S  + +++  A+N  T                 Q+ VVA+D G
Sbjct: 2845 --------MYNLDQSQSVDVIESFAVNMETGWITTLRELDHEKRDSYQIKVVASDHG 2893



 Score = 47.4 bits (111), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 41/137 (29%), Positives = 68/137 (49%), Gaps = 16/137 (11%)

Query: 50   YSVSALENLPVNYVLLTVTT---NKPRDLRVKYWL----SNDYGERFSISRQ-GDISLMQ 101
            Y    +ENLP    ++ +     +   + +V Y L    S D  E F+++ + G I+ ++
Sbjct: 2814 YEAFIVENLPAGSRVIQIRASDLDSGSNGQVMYNLDQSQSVDVIESFAVNMETGWITTLR 2873

Query: 102  CLDYETEDSYRFTVYATD----TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLA 157
             LD+E  DSY+  V A+D      ++++A V+++V +VND  PRF    Y+  +      
Sbjct: 2874 ELDHEKRDSYQIKVVASDHGEKVQLSSTAIVDVTVTDVNDSPPRFTAEIYKGTVSE---- 2929

Query: 158  DLTPGSVIGKVEAADGD 174
            D  PG VI  V   D D
Sbjct: 2930 DDPPGGVIAIVSTTDAD 2946



 Score = 45.1 bits (105), Expect = 0.067,   Method: Compositional matrix adjust.
 Identities = 54/195 (27%), Positives = 88/195 (45%), Gaps = 20/195 (10%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTTNKPRDL----RVKYWLSNDYGERFSI-SRQGDIS 98
            +F +  Y V   E+  +N  ++ V     +DL     V+Y +  D  ++FSI S  G + 
Sbjct: 821  EFLQESYFVEVSEDKEINSEIIQVEATD-KDLGPNGHVRYSILTD-TDKFSIDSVTGVVK 878

Query: 99   LMQCLDYETEDSYRFTVYATDTL-----MTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
            ++  LD E +  +   V A D       + ++  + +S+ +VND  P+F  P Y + +  
Sbjct: 879  ILNPLDREEQQVHYLKVEARDQAREEPQLLSTVILKVSLDDVNDNPPKFIPPNYRVKV-- 936

Query: 154  IPLADLTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSIND-SGHISIV-DLSALNT 209
                DL  G++I  +EA D D G   +V  SL    E  F ++  SG + I+  L     
Sbjct: 937  --REDLPEGTIIMWLEAHDPDLGQSSQVRYSLLDHGEGNFDVDKLSGAVRIIQQLDFEKK 994

Query: 210  STIQLVVVATDTGNP 224
                L V A D G P
Sbjct: 995  QVYNLTVRAKDKGKP 1009



 Score = 42.7 bits (99), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 41/162 (25%), Positives = 74/162 (45%), Gaps = 14/162 (8%)

Query: 45   FSKNEYSVSALENLPVNYVLL--TVTTNKPRDLRVKYWLS----NDYGERFSISRQGDIS 98
            FS+  YS+   EN PV + +L   VT          ++ S    N+ G  F +++QG + 
Sbjct: 3440 FSRGNYSLIIQENKPVGFSVLQLVVTDRDSSHNGPPFFFSIVSGNEEGA-FEVNQQGALL 3498

Query: 99   LMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIP 155
                ++ + +D Y   V   D     +++   ++I V+  + + P       E+F+    
Sbjct: 3499 TAAAINRKVKDHYLLHVKVADNGKPQLSSLTYIDIRVIEESVYPPAIL--PLEIFI--TA 3554

Query: 156  LADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSG 197
              +   G VIGK+ A D D  D +T SL    + +FS++ +G
Sbjct: 3555 FGEEYSGGVIGKIHATDQDVYDTLTYSLDPQMDSLFSVSSTG 3596



 Score = 41.2 bits (95), Expect = 0.92,   Method: Compositional matrix adjust.
 Identities = 35/121 (28%), Positives = 59/121 (48%), Gaps = 9/121 (7%)

Query: 83   NDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRF 142
            ND+       + G I+L     +  + SY   V A+D +  +SA V+++V+  N   P F
Sbjct: 2433 NDHKNFVIDGKTGIITLSNLRRHALKPSYSLQVSASDGVFRSSAQVHVTVIGGNLHSPLF 2492

Query: 143  RYPQYELFLPHIPLADLTP-GSVIGKVEAADGDKG--DRVTLSLRGPYEK-MFSINDSGH 198
               +YE     + LA+  P  +++ +V+A+DGD G    VT  +   + K  F  N+ G 
Sbjct: 2493 LQNEYE-----VELAENAPLHTLVTEVKASDGDSGIYGHVTYHIVNDFAKDRFYTNERGQ 2547

Query: 199  I 199
            I
Sbjct: 2548 I 2548



 Score = 40.8 bits (94), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 54/191 (28%), Positives = 83/191 (43%), Gaps = 30/191 (15%)

Query: 56   ENLPVNYVLLTVTTNKP---RDLRVKYWLSNDYG-ERFSISRQ-GDISLMQCLDYETEDS 110
            EN P+   ++ V+       RD  + Y + +  G   F I  + G I     LD E+   
Sbjct: 1045 ENAPLGSSVMKVSARDEDMGRDGEIHYSIRDGSGVGVFRIDEETGVIETSDRLDRESTSH 1104

Query: 111  YRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSV-IG 166
            Y  TVYA+D     +++   V I V +VND  P+   P   ++ P I   + +P  V + 
Sbjct: 1105 YWLTVYASDQGVVPLSSFVEVYIEVEDVNDNAPQTSEP---VYYPEI--MENSPKDVSVV 1159

Query: 167  KVEAADGDKGDRVTLSLRGPYEKMFSINDSGHISIVDLSALNTSTIQ-----------LV 215
            ++EA D D      L+      K+ S N  G  SI   + L T+T +           L 
Sbjct: 1160 QIEAFDPDSSSDDKLTY-----KITSGNPQGFFSINSKTGLITTTARKLDREQQDEHILE 1214

Query: 216  VVATDTGNPPR 226
            V  TD G+PP+
Sbjct: 1215 VTVTDNGSPPK 1225



 Score = 39.7 bits (91), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 55/215 (25%), Positives = 89/215 (41%), Gaps = 19/215 (8%)

Query: 24  DRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLR---VKYW 80
           DR A   ++V     +    +F++  Y  S  EN+P+   +++V+   P +     V Y 
Sbjct: 442 DRKASTRVLVKVLSANSHPPEFTQTAYKASFDENVPIGTTVMSVSAVDPDEGENGYVTYS 501

Query: 81  LSNDYGERFSISR-QGDISLMQCLDYE-TEDSYRFTVYATDTLMTTSATVNI----SVVN 134
           ++N     F I+   G +S  + LDYE     Y   + A+D        + I    ++ N
Sbjct: 502 IANLNHVPFVINHFTGAVSTSENLDYELMPRVYTLRIRASDWGSPYRREIEILATLTLNN 561

Query: 135 VNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYE-KMFSI 193
           +ND  P F     E  +P     DL  G  I  V A D D+   V   +    E  +FS+
Sbjct: 562 LNDNTPLFEKINCEGTIPR----DLGVGEQITTVSAIDADELQLVRYQIEAGNELDLFSL 617

Query: 194 NDSGHI-----SIVDLSALNTSTIQLVVVATDTGN 223
           N +  +     S++D      S   L + ATD  N
Sbjct: 618 NPNSGVLSLKQSLMDGLGAKVSFHSLRITATDGEN 652


>gi|260798696|ref|XP_002594336.1| hypothetical protein BRAFLDRAFT_201381 [Branchiostoma floridae]
 gi|229279569|gb|EEN50347.1| hypothetical protein BRAFLDRAFT_201381 [Branchiostoma floridae]
          Length = 2488

 Score = 64.3 bits (155), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 58/181 (32%), Positives = 86/181 (47%), Gaps = 18/181 (9%)

Query: 55  LENLPVNYVLLTVT---TNKPRDLRVKYWLSNDYGERFSISRQGDISLMQCLDYETEDS- 110
           +EN+P    +L V+    +   + R+ Y + +D    F I+  G I     LDYE  ++ 
Sbjct: 216 VENIPSTKAILQVSASDCDSDENQRITYSVDDD--AHFRIASDGTIYPNSQLDYEVPNNM 273

Query: 111 YRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGK 167
           Y F V A D    ++T SATV + + N+ND  P F    Y  F+      D  PG ++  
Sbjct: 274 YEFLVKAVDHGTPVLTGSATVRVRMANINDEPPVFSQRTYTTFVAE----DAEPGGLVAT 329

Query: 168 VEAADGDKGDRVTLSLRGPYEKMFSIN-DSGHISIVDLSALNTSTIQLVVVATD---TGN 223
           V A D D GD +T ++ G  +  F I+   G I + D  +L  S   L V ATD   +G 
Sbjct: 330 VHATDMD-GDGITYAITGGNDGTFVIDAKDGIIRLSDNPSLQGSHYTLNVTATDDNASGG 388

Query: 224 P 224
           P
Sbjct: 389 P 389



 Score = 52.0 bits (123), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 59/196 (30%), Positives = 91/196 (46%), Gaps = 21/196 (10%)

Query: 41  RELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGERFSISR-QGDISL 99
           R  QF +  Y V+  E     Y ++ V     R  R+ Y L +   + F+I+R  G I+L
Sbjct: 100 RPPQFMQQTYDVTVPEETLDQYPVVQVEAMSFRGSRISYSLKSSM-DMFAINRLNGQITL 158

Query: 100 MQCLDYETED-SYRFTVYATDTL---MTTSATVNISVVNVNDWDPRFRYPQYEL--FLPH 153
            + +DYETE   Y  +V AT+T    M++   V ++V ++ND  P F  P Y     + +
Sbjct: 159 HRGIDYETEQRQYTLSVEATETGVNPMSSIVQVRVTVADINDCTPEFANPIYSQRDVVEN 218

Query: 154 IPLADLTPGSVIGKVEAA--DGDKGDRVTLSLRGPYEKMFSINDSGHI---SIVDLSALN 208
           IP         I +V A+  D D+  R+T S+    +  F I   G I   S +D    N
Sbjct: 219 IPST-----KAILQVSASDCDSDENQRITYSVDD--DAHFRIASDGTIYPNSQLDYEVPN 271

Query: 209 TSTIQLVVVATDTGNP 224
            +  + +V A D G P
Sbjct: 272 -NMYEFLVKAVDHGTP 286



 Score = 45.4 bits (106), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 48/189 (25%), Positives = 82/189 (43%), Gaps = 23/189 (12%)

Query: 13  LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKP 72
           ++ R I  D   R     L V+          + +   +V+  EN P++ V+ TV  +  
Sbjct: 587 IIRRVIATDGGGRSTSVRLDVAITDVENEPPMWEREYPAVTIPENTPIDQVVATVKASST 646

Query: 73  R-DLRVKYWL------SNDYGERFSI-----SRQGDISLMQCLDYETEDSYRFTVYATDT 120
             D R+ Y L        +  +RF +     +R  DI +   LD+ET   +   + A + 
Sbjct: 647 LLDSRITYSLVDGQLPETNKPKRFYLRTNRATRTADICVFHPLDFETTPRFELKIRAENA 706

Query: 121 L---MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTP-GSVIGKVEAADGDKG 176
               +     V I + +VND  P F    Y +      +A+ +P G+++G+V A D D G
Sbjct: 707 ARIPLAAYTIVEIRLTDVNDEVPDFTAKSYAM-----SVAEQSPKGTLVGQVTAVDADTG 761

Query: 177 D--RVTLSL 183
           D  +VT S+
Sbjct: 762 DAGKVTYSI 770



 Score = 45.1 bits (105), Expect = 0.053,   Method: Compositional matrix adjust.
 Identities = 45/160 (28%), Positives = 75/160 (46%), Gaps = 14/160 (8%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTN---KPRDLRVKYWLS-NDYGERFSISRQ-GDISL 99
            F + +Y  S  E+  V Y ++T+T N   +  + +++Y ++  + G  F +  + G I +
Sbjct: 851  FPRTQYEASVDEDKDVGYSVVTLTANDEDEGANAKLRYQITTGNVGGVFDVVPEIGTIVV 910

Query: 100  MQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADL 159
               LD+E    Y   + A+D     +  VNI V N+ND +P F   +Y      I   D 
Sbjct: 911  AAPLDFEAVQEYELQLVASDGKNENTTKVNIKVNNINDEEPEFTRNEY---TGSIREEDS 967

Query: 160  TPGSVIGKVEAADGDKGD-----RVTLSLRGPYEKMFSIN 194
                 I +V A D D+G      R +L  +G  ++ FSIN
Sbjct: 968  NTPIPILQVTARDPDRGASDADIRYSLQGQGANDE-FSIN 1006


>gi|22095553|sp|Q9R0M0.2|CELR2_MOUSE RecName: Full=Cadherin EGF LAG seven-pass G-type receptor 2;
           AltName: Full=Flamingo homolog; Flags: Precursor
          Length = 2920

 Score = 64.3 bits (155), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 67/219 (30%), Positives = 102/219 (46%), Gaps = 22/219 (10%)

Query: 25  RYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWL 81
           R ALATL +    T+  +  F + EY  S  ENL V Y +LTV     + P +  + Y L
Sbjct: 269 RSALATLTILVTDTNDHDPVFEQQEYKESLRENLEVGYEVLTVRATDGDAPPNANILYRL 328

Query: 82  SNDYGER----FSIS-RQGDISLMQCLDYETEDSYRFTVYATDT-----LMTTSATVNIS 131
               G+     F I  R G I     +D E  +SY+ TV A+D        +++A V +S
Sbjct: 329 LEGAGDSPSDAFEIDPRSGVIRTRGPVDREEVESYKLTVEASDQGRDPGPRSSTAIVFLS 388

Query: 132 VVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYE 188
           V + ND  P+F   +Y + +      D+TPG+ + +V A+D DKG    +    + G   
Sbjct: 389 VEDDNDNAPQFSEKRYVVQV----REDVTPGAPVLRVTASDRDKGSNALVHYSIMSGNAR 444

Query: 189 KMFSIN-DSGHISIVD-LSALNTSTIQLVVVATDTGNPP 225
             F ++  +G + +V  L    T    L + A D G PP
Sbjct: 445 GQFYLDAQTGALDVVSPLDYETTKEYTLRIRAQDGGRPP 483



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 48/171 (28%), Positives = 79/171 (46%), Gaps = 15/171 (8%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGERFSIS---RQGDIS 98
           F    +  + LE++P+ Y++L V     +   + R++Y L+   G  F  +     G IS
Sbjct: 506 FVSTPFQATVLESVPLGYLVLHVQAIDADAGDNARLEYSLAG-VGHDFPFTINNGTGWIS 564

Query: 99  LMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIP 155
           +   LD E  D Y F V A D     +T SA+V++++++VND +P F  P+Y + L    
Sbjct: 565 VAAELDREEVDFYSFGVEARDHGTPALTASASVSVTILDVNDNNPTFTQPEYTVRLNE-- 622

Query: 156 LADLTPGSVIGKVEAADGDKGDRVTLSL-RGPYEKMFSINDSGHISIVDLS 205
             D   G+ +  V A D      +T  +  G     FSI       +V L+
Sbjct: 623 --DAAVGTSVVTVSAVDRHAHSVITYQITSGNTRNRFSITSQSGGGLVSLA 671



 Score = 44.7 bits (104), Expect = 0.084,   Method: Compositional matrix adjust.
 Identities = 40/149 (26%), Positives = 69/149 (46%), Gaps = 10/149 (6%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWL-SNDYGERFSIS-RQGDISL 99
            F ++E+ V   EN P+   +  VT   P +    ++ Y +   +  E F +    G+++ 
Sbjct: 922  FEQDEFDVFVEENSPIGLAVARVTATDPDEGTNAQIMYQIVEGNIPEVFQLDIFSGELTA 981

Query: 100  MQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPH--IPLA 157
            +  LDYE    Y   + AT   + + ATV++ +++ ND  P      +E+   +     +
Sbjct: 982  LVDLDYEDRPEYVLVIQATSAPLVSRATVHVRLLDRNDNPPVLG--NFEILFNNYVTNRS 1039

Query: 158  DLTPGSVIGKVEAADGDKGDRVTLSL-RG 185
               PG  IG+V A D D  D +T S  RG
Sbjct: 1040 SSFPGGAIGRVPAHDPDISDSLTYSFERG 1068



 Score = 43.5 bits (101), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 48/188 (25%), Positives = 85/188 (45%), Gaps = 12/188 (6%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTT-NKPRDLRVKYWL-SNDYGERFSISRQ---GDISL 99
           F++ EY+V   E+  V   ++TV+  ++     + Y + S +   RFSI+ Q   G +SL
Sbjct: 611 FTQPEYTVRLNEDAAVGTSVVTVSAVDRHAHSVITYQITSGNTRNRFSITSQSGGGLVSL 670

Query: 100 MQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADL 159
              LDY+ E  Y   V A+D     +A + ++V + N   P F+   Y +        D 
Sbjct: 671 ALPLDYKLERQYVLAVTASDGTRQDTAQIVVNVTDANTHRPVFQSSHYTVNGNE----DR 726

Query: 160 TPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSINDSGHISI-VDLSALNTSTIQLVV 216
             G+ +  + A D D G+  R+T  +     +     D+G ++   +L   +  +  L +
Sbjct: 727 PAGTTVVLISATDEDTGENARITYFMEDSIPQFRIDGDTGAVTTQAELDYEDQVSYTLAI 786

Query: 217 VATDTGNP 224
            A D G P
Sbjct: 787 TARDNGIP 794


>gi|47215089|emb|CAG04543.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 891

 Score = 64.3 bits (155), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 53/151 (35%), Positives = 76/151 (50%), Gaps = 11/151 (7%)

Query: 87  ERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDTLM---TTSATVNISVVNVNDWDPRF 142
           E F + +  G++ +   L+ E  + YRF V A D  +   T +ATV I+V++VND DP+F
Sbjct: 583 ELFEVDANSGEVRVRAVLNREQREHYRFHVAAADKGVPGKTGTATVEITVLDVNDNDPKF 642

Query: 143 RYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSINDSGHI- 199
               Y  F  +  +A L P   +G V   DGDKG+  RVTL +     K    N +G I 
Sbjct: 643 MLDDYS-FSVNENMAPLNP---VGVVTVTDGDKGENARVTLLVEPDNGKFVIQNGTGTIL 698

Query: 200 SIVDLSALNTSTIQLVVVATDTGNPPRQASV 230
           S +       ST    + A D G+PPR + V
Sbjct: 699 SSISFDREKESTYTFRLKAVDAGDPPRTSYV 729



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 62/203 (30%), Positives = 93/203 (45%), Gaps = 15/203 (7%)

Query: 44  QFSKNEYSVSALENL-PVNYV-LLTVTT-NKPRDLRVKYWLSNDYGERFSISRQGDISLM 100
           +F  ++YS S  EN+ P+N V ++TVT  +K  + RV   +  D G+    +  G I   
Sbjct: 641 KFMLDDYSFSVNENMAPLNPVGVVTVTDGDKGENARVTLLVEPDNGKFVIQNGTGTILSS 700

Query: 101 QCLDYETEDSYRF---TVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLA 157
              D E E +Y F    V A D   T+   V I+V++ ND  P    P    F   +P  
Sbjct: 701 ISFDREKESTYTFRLKAVDAGDPPRTSYVAVTINVLDENDNAPYVTKPSNSTFTHLLP-- 758

Query: 158 DLTPGSVIGKVEAADGDKGDRV----TLSLRGPYEKMFSINDSGHISIVD-LSALNTSTI 212
           D  P + +  VEA D D G       TL+   P+        SG I++   L+  +    
Sbjct: 759 DTPPDTRVAVVEAEDIDSGLNAELVYTLAGGNPFGLFRIAPGSGEITLAQKLAGSHRGLH 818

Query: 213 QLVVVATDTGNPPRQASVPAIMH 235
           +LVV  +D G PPR  +  A++H
Sbjct: 819 RLVVRVSDRGKPPRHTT--ALVH 839


>gi|73949397|ref|XP_849328.1| PREDICTED: protocadherin gamma-A3 [Canis lupus familiaris]
          Length = 871

 Score = 64.3 bits (155), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 63/204 (30%), Positives = 93/204 (45%), Gaps = 17/204 (8%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWLSNDYGERFSI----SRQGDI 97
           F+++EY VS  ENLPV   LLTV    P +    +V Y L    G+   I    S  GDI
Sbjct: 242 FTQSEYQVSVQENLPVGTTLLTVNATDPDEGFNAQVSYILDKMPGKVAQIFYLNSVTGDI 301

Query: 98  SLMQCLDYETEDSYRFTVYATDT-LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
           S+++ LDYE    Y   V A D   + + A + ++V++VND  P          +P    
Sbjct: 302 SILRSLDYEDAMFYEIKVEAQDGPGLFSRAKILVTVLDVNDNAPEVTITSLTGSVPE--- 358

Query: 157 ADLTPGSVIGKVEAADGDKGD--RVTLSLRG--PYEKMFSINDSGH-ISIVDLSALNTST 211
            + T G  I  +   D D G   +VT+ + G  P+    SI+     ++   L     S 
Sbjct: 359 -EATAGREIALINVHDRDSGQNGQVTVFVLGNMPFNLEKSIDQYYRLVTARSLDREQVSE 417

Query: 212 IQLVVVATDTGNPPRQASVPAIMH 235
             + + ATD GNPP   +   I+H
Sbjct: 418 YNITLRATDGGNPPLSTNTHIIVH 441



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 72/274 (26%), Positives = 113/274 (41%), Gaps = 45/274 (16%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKP---RDLRVKYWLSNDYGERFSI-------SRQ 94
           FS+  YS   LEN P    +  VTT  P    +  + Y L  D  +   +       S  
Sbjct: 452 FSQATYSAYILENNPRGASIFCVTTQDPDSIHNAHITYALMEDTIQGVPLSTYVSINSNT 511

Query: 95  GDISLMQCLDYETEDSYRFTVYATDTL---MTTSATVNISVVNVNDWDPRFRYPQYELFL 151
           G +  +   DYE        V A D     ++++ +++I V++ ND  P   YP     L
Sbjct: 512 GVLYALCSFDYEQVRDLHLLVTACDNGNPPLSSNVSISIFVLDQNDNAPEILYPT----L 567

Query: 152 P-----HIPLA--DLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-DSGHI- 199
           P      + LA     PG ++ KV A D D G    LS   L+     +F +   +G + 
Sbjct: 568 PTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYHLLKASEPGLFQVGLHTGEVR 627

Query: 200 ---SIVDLSALNTSTIQLVVVATDTGNPPRQASVPAIMHFPEAI------VQQASSKLNS 250
              +++D  AL  S   LVV   D G PP  A+V   +   ++I      +    +  +S
Sbjct: 628 TARALLDRDALKQS---LVVAVQDHGQPPLSATVTLTVAIADSIPDVLADLGSLEAPRDS 684

Query: 251 GTSSTVLIILGVV----LIVLGFVIILLILYIHK 280
             S   L ++  V     + L FVI+LL L + +
Sbjct: 685 QASDLTLYLVVAVAAVSCVFLAFVIVLLALRLRR 718


>gi|148672469|gb|EDL04416.1| cadherin EGF LAG seven-pass G-type receptor 1 [Mus musculus]
          Length = 3010

 Score = 64.3 bits (155), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 62/229 (27%), Positives = 106/229 (46%), Gaps = 22/229 (9%)

Query: 13  LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTT--- 69
           L V A+ + +  R A   L V+ + T+     F ++EY     ENL V Y +LT+     
Sbjct: 336 LKVSAVDHGSPRRSAATYLTVTVSDTNDHSPVFEQSEYRERIRENLEVGYEVLTIRATDG 395

Query: 70  NKPRDLRVKYWLSNDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDT-----LMT 123
           + P +  ++Y L    G  F I +R G +     +D E    Y+  V A D       ++
Sbjct: 396 DAPSNANMRYRLLEGAGGVFEIDARSGVVRTRAVVDREEAAEYQLLVEANDQGRNPGPLS 455

Query: 124 TSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS- 182
            SATV+I V + ND  P+F   +Y + +P     D+   + + +V+A D D+G    +  
Sbjct: 456 ASATVHIVVEDENDNYPQFSEKRYVVQVPE----DVAVNTAVLRVQATDRDQGQNAAIHY 511

Query: 183 --LRGPYEKMFSIND-SGHISIV---DLSALNTSTIQLVVVATDTGNPP 225
             + G  +  F ++  SG + ++   D  A+   T++  + A D G PP
Sbjct: 512 SIVSGNLKGQFYLHSLSGSLDVINPLDFEAIREYTLR--IKAQDGGRPP 558



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 53/189 (28%), Positives = 87/189 (46%), Gaps = 14/189 (7%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRDLR--VKYWLSN-DYGERFSISRQ---GDIS 98
           F++  Y +   E+  V   +LT+   + RD    + Y L+  +   RF++S Q   G I+
Sbjct: 702 FTQPVYELRLNEDAAVGSSVLTLRA-RDRDANSVITYQLTGGNTRNRFALSSQSGGGLIT 760

Query: 99  LMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLAD 158
           L   LDY+ E  Y   V A+D   + +A V I+V + N   P F+   Y + +      D
Sbjct: 761 LALPLDYKQERQYVLAVTASDGTRSHTAQVFINVTDANTHRPVFQSSHYTVSVSE----D 816

Query: 159 LTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSINDSGHI-SIVDLSALNTSTIQLV 215
              G+ I  + A D D G+  R+T  L  P  +     D+G I ++ +L   + +   L 
Sbjct: 817 RPVGTSIATISATDEDTGENARITYVLEDPVPQFRIDPDTGTIYTMTELDYEDQAAYTLA 876

Query: 216 VVATDTGNP 224
           + A D G P
Sbjct: 877 ITAQDNGIP 885



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 49/168 (29%), Positives = 76/168 (45%), Gaps = 33/168 (19%)

Query: 45  FSKNEYSVSALENLPVNYVLL---TVTTNKPRDLRVKYWL-------------------- 81
           F  + +  + LEN+P+ + +L    V  +   + R++Y L                    
Sbjct: 580 FVSSPFQAAVLENVPLGHSVLHIQAVDADAGENARLQYRLVDTASTIVGGSSVDSENPAS 639

Query: 82  SNDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVND 137
           + D+   F I +  G I++   LD E  + Y F V A D     M++SA+V+I+V++VND
Sbjct: 640 APDF--PFQIHNSSGWITVCAELDREEVEHYSFGVEAVDHGSPAMSSSASVSITVLDVND 697

Query: 138 WDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRG 185
            DP F  P YEL L      D   GS +  + A D D    +T  L G
Sbjct: 698 NDPMFTQPVYELRLNE----DAAVGSSVLTLRARDRDANSVITYQLTG 741



 Score = 45.8 bits (107), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 38/140 (27%), Positives = 65/140 (46%), Gaps = 9/140 (6%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWL-SNDYGERFSISR-QGDISL 99
            F K+E  +   EN PV  V+  +  N P +    ++ Y +   +  E F +    GD+  
Sbjct: 1014 FEKDELELFVEENSPVGSVVARIRANDPDEGPNAQIMYQIVEGNVPEVFQLDLLSGDLRA 1073

Query: 100  MQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPH--IPLA 157
            +  LD+E    Y   V AT   + + ATV+I +++ ND  P    P +++   +     +
Sbjct: 1074 LVELDFEVRRDYMLVVQATSAPLVSRATVHIRLLDQNDNPPEL--PDFQILFNNYVTNKS 1131

Query: 158  DLTPGSVIGKVEAADGDKGD 177
            +  P  VIG++ A D D  D
Sbjct: 1132 NSFPSGVIGRIPAHDPDLSD 1151



 Score = 43.1 bits (100), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 53/209 (25%), Positives = 89/209 (42%), Gaps = 23/209 (11%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTTNKPRDL---RVKYWLSNDYGER----FSI-SRQG 95
           QF    Y VS  EN P    ++ +  + P +    R+ Y +   + ER    F I +  G
Sbjct: 259 QFPLPSYQVSVPENEPAGTAVIELRAHDPDEGDAGRLSYQMEALFDERSNGYFLIDAATG 318

Query: 96  DISLMQCLDYETEDSYRFTVYATD--TLMTTSAT-VNISVVNVNDWDPRFRYPQYELFLP 152
            ++  + LD ET+D++   V A D  +   ++AT + ++V + ND  P F   +Y   + 
Sbjct: 319 AVTTARSLDRETKDTHVLKVSAVDHGSPRRSAATYLTVTVSDTNDHSPVFEQSEYRERI- 377

Query: 153 HIPLADLTPGSVIGKVEAADGDKGDRVTLSLR--GPYEKMFSINDSGHI----SIVDLSA 206
                +L  G  +  + A DGD      +  R       +F I+    +    ++VD   
Sbjct: 378 ---RENLEVGYEVLTIRATDGDAPSNANMRYRLLEGAGGVFEIDARSGVVRTRAVVDRE- 433

Query: 207 LNTSTIQLVVVATDTGNPPRQASVPAIMH 235
              +  QL+V A D G  P   S  A +H
Sbjct: 434 -EAAEYQLLVEANDQGRNPGPLSASATVH 461


>gi|444724739|gb|ELW65337.1| Cadherin EGF LAG seven-pass G-type receptor 2, partial [Tupaia
           chinensis]
          Length = 2958

 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 69/219 (31%), Positives = 101/219 (46%), Gaps = 22/219 (10%)

Query: 25  RYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWL 81
           R ALATL +    T+  +  F + EY  S  ENL V Y +LTV     + P +  + Y L
Sbjct: 237 RSALATLTILVTDTNDHDPVFEQQEYKESLRENLEVGYEVLTVRATDGDAPPNANILYRL 296

Query: 82  SNDYG----ERFSIS-RQGDISLMQCLDYETEDSYRFTVYATDT-----LMTTSATVNIS 131
               G    E F I  R G I     +D E  +SY+ TV A+D        + +A V +S
Sbjct: 297 LEGPGAGPSEVFEIDPRSGVIRTRGPVDREEVESYQLTVEASDQGRDPGPRSATAAVFLS 356

Query: 132 VVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYE 188
           V + ND  P+F   +Y + +      D+TPG+ + +V A+D DKG    +    + G   
Sbjct: 357 VEDDNDNAPQFSEKRYVVQV----REDVTPGAPVLRVTASDRDKGSNALVHYSIMSGNAR 412

Query: 189 KMFSIN-DSGHISIVD-LSALNTSTIQLVVVATDTGNPP 225
             F ++  +G + +V  L    T    L V A D G PP
Sbjct: 413 GQFYLDAQTGALDVVSPLDYETTKEYTLRVRAQDGGRPP 451



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 50/171 (29%), Positives = 80/171 (46%), Gaps = 15/171 (8%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGERFSIS---RQGDIS 98
           F    +  + LE++P+ Y++L V     +   + R++Y L+   G  F  S     G IS
Sbjct: 473 FVSTPFQATVLESVPLGYLVLHVQAIDADAGDNARLEYRLAG-VGHDFPFSINNGTGWIS 531

Query: 99  LMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIP 155
           +   LD E  D Y F V A D     +T SA+V++++++VND +P F  P+Y + L    
Sbjct: 532 VAAELDREEVDFYSFGVEARDHGTPALTASASVSVTILDVNDNNPTFTQPEYTVRLNE-- 589

Query: 156 LADLTPGSVIGKVEAADGDKGDRVTLSL-RGPYEKMFSINDSGHISIVDLS 205
             D   G+ +  V A D D    +T  +  G     FSI       +V L+
Sbjct: 590 --DAAVGTSVVTVSAVDRDAHSVITYQITSGNTRNRFSITSQSGGGLVSLA 638



 Score = 44.7 bits (104), Expect = 0.070,   Method: Compositional matrix adjust.
 Identities = 51/189 (26%), Positives = 86/189 (45%), Gaps = 14/189 (7%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRDLR--VKYWL-SNDYGERFSISRQ---GDIS 98
           F++ EY+V   E+  V   ++TV+    RD    + Y + S +   RFSI+ Q   G +S
Sbjct: 578 FTQPEYTVRLNEDAAVGTSVVTVSAVD-RDAHSVITYQITSGNTRNRFSITSQSGGGLVS 636

Query: 99  LMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLAD 158
           L   LDY+ E  Y   V A+D     +A V ++V + N   P F+   Y + +      D
Sbjct: 637 LALPLDYKLERQYVLAVTASDGTRQDTAQVVVNVTDANTHRPVFQSSHYTVNVNE----D 692

Query: 159 LTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSINDSGHISI-VDLSALNTSTIQLV 215
              G+ +  + A D D G+  R+T  +     +     D+G ++   +L   +  +  L 
Sbjct: 693 RPAGTTVVLISATDEDTGENARITYFMEDSIPQFRIDADTGAVTTQAELDYEDQVSYTLA 752

Query: 216 VVATDTGNP 224
           + A D G P
Sbjct: 753 ITARDNGIP 761



 Score = 44.3 bits (103), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 40/149 (26%), Positives = 69/149 (46%), Gaps = 10/149 (6%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWL-SNDYGERFSIS-RQGDISL 99
            F ++E+ V   EN P+   +  VT   P +    ++ Y +   +  E F +    G+++ 
Sbjct: 889  FEQDEFDVFVEENSPIGLAVARVTATDPDEGTNAQIMYQIVEGNIPEVFQLDIFSGELTA 948

Query: 100  MQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPH--IPLA 157
            +  LDYE    Y   + AT   + + ATV++ +++ ND  P      +E+   +     +
Sbjct: 949  LVDLDYEDRPEYILVIQATSAPLVSRATVHVRLLDRNDNPPVLG--NFEILFNNYVTNRS 1006

Query: 158  DLTPGSVIGKVEAADGDKGDRVTLSL-RG 185
               PG  IG+V A D D  D +T S  RG
Sbjct: 1007 SSFPGGAIGRVPAHDPDISDSLTYSFERG 1035


>gi|300794923|ref|NP_001179921.1| protocadherin Fat 1 precursor [Bos taurus]
          Length = 4588

 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 42/156 (26%), Positives = 79/156 (50%), Gaps = 11/156 (7%)

Query: 33   VSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYW---LSNDYGERF 89
            +SK   SL  + F ++ ++ + +E+ PV +++  ++   P    +  W   +  +Y   F
Sbjct: 1346 ISKPKPSLEPISFEESFFTFTVMESDPVAHMIGVISVEPPG---IPLWFDIIGGNYDSHF 1402

Query: 90   SISR-QGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYE 148
             + R  G I + + LD E + +Y  TV ATD   T    V I V++ ND  P+F   +YE
Sbjct: 1403 DVDRGTGTIIIAKPLDAEQKSNYNLTVEATDGTTTILTQVFIKVIDTNDHRPQFSTSKYE 1462

Query: 149  LFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR 184
            + +P     D  P + I ++ A D D+ +++  +L+
Sbjct: 1463 VVIPE----DTVPETEILQISAVDKDEKNKLIYTLQ 1494



 Score = 58.9 bits (141), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 57/199 (28%), Positives = 93/199 (46%), Gaps = 16/199 (8%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTT----NKPRDLRVKYWLSN-DYGERFSISR---QG 95
            +F+   Y  +  E+ P   V+  V+T    ++  + +V Y+++  D   +F+I     + 
Sbjct: 2917 RFTAEIYKGTVSEDDPPGGVIAIVSTTDADSEEINRQVTYYITGGDPLGQFAIENIQNEW 2976

Query: 96   DISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIP 155
             + + + LD E  DSY  T+ ATD   ++ A V + V++ ND  P      Y   +P   
Sbjct: 2977 KVYVKKPLDREERDSYLLTITATDGTFSSKAIVEVKVLDANDNTPVCEKTLYSDTIPE-- 3034

Query: 156  LADLTPGSVIGKVEAADGD--KGDRVTLSLRGPYEKMFSIN-DSGHISI-VDLSALNTST 211
              D  PG +I +V A D D      +T +L GP  + F +N D+G +     L     + 
Sbjct: 3035 --DAFPGKLIMQVSATDADIRSNAEITYTLFGPGAEKFKLNPDTGELKTSAPLDREEQAA 3092

Query: 212  IQLVVVATDTGNPPRQASV 230
              L+V ATD G    QASV
Sbjct: 3093 YHLLVKATDGGGRFCQASV 3111



 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 63/225 (28%), Positives = 108/225 (48%), Gaps = 19/225 (8%)

Query: 13   LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVT---T 69
            L+V+A   D   R+  A+++++    +    +FS + Y+++  EN     +L  V     
Sbjct: 3095 LLVKAT--DGGGRFCQASVVLTLEDVNDNAPEFSADPYTITVFENTEPGTLLTRVQATDA 3152

Query: 70   NKPRDLRVKYWLSNDYGERFSISR-QGDISLMQCLDYETEDSYRFTVYATD----TLMTT 124
            +   + ++ Y L N    +FSI+   G I L + LD E +  Y  T+ A D      +T 
Sbjct: 3153 DAGLNRKISYSLLNSADGQFSINELSGIIQLEKPLDRELQAVYTLTLKAVDHGLPRRLTA 3212

Query: 125  SATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAA--DGDKGDRVTLS 182
            + T+ ISV+++ND  P F Y +Y   +      D+  G+ + +V AA  D +    +T S
Sbjct: 3213 TGTIVISVLDINDNPPVFEYREYGATVSE----DILIGTEVLQVYAASRDIEANAEITYS 3268

Query: 183  -LRGPYEKMFSIND-SGHISIVD-LSALNTSTIQLVVVATDTGNP 224
             + G     FSI+  +G I I++ L   ++    L V ATD G P
Sbjct: 3269 IISGNEHGKFSIDSKTGAIFIIENLDYESSHEYYLTVEATDGGTP 3313



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 60/217 (27%), Positives = 100/217 (46%), Gaps = 18/217 (8%)

Query: 29   ATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWLSNDY 85
            A + V+  G +L    F +NEY V   EN P++ ++  V  +         V Y + ND+
Sbjct: 2476 AQVHVTVIGGNLHSPLFLQNEYEVELAENAPLHTLVTEVKASDGDSGIYGHVTYHIVNDF 2535

Query: 86   G-ERFSISRQGDISLMQCLDYET--EDSYRFTVYATDTLMTTS-ATVNISVVNVNDWDPR 141
              +RF  + +G I  ++ LD ET  E        A D     +  T+N+ + + ND  P+
Sbjct: 2536 AKDRFYTNERGQIFTLEKLDRETPAEKVIPIRFMAKDAGGKVAFCTINVILTDDNDNAPQ 2595

Query: 142  FRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDR--VTLSLRGPYEKM---FSIND- 195
            FR  ++E+ +     +    G+ + KV A+D D+G    +T ++    E +     IN  
Sbjct: 2596 FRATKFEVNIG----SSAPKGTSVIKVLASDADEGSNADITYAIEADSESVKENLEINRA 2651

Query: 196  SGHISIVD-LSALNTSTIQLVVVATDTGNPPRQASVP 231
            SG I+  + L  L        V A D G+P R++ VP
Sbjct: 2652 SGVITTKESLIGLENEVFTFFVRAVDNGSPQRESVVP 2688



 Score = 54.3 bits (129), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 66/239 (27%), Positives = 115/239 (48%), Gaps = 23/239 (9%)

Query: 5    DDFLQPI-TLVVRAIQYDNQDRY-ALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNY 62
            D  LQ + TL ++A+ +    R  A  T+++S    +     F   EY  +  E++ +  
Sbjct: 3188 DRELQAVYTLTLKAVDHGLPRRLTATGTIVISVLDINDNPPVFEYREYGATVSEDILIGT 3247

Query: 63   VLLTVTTNKPRDLRVKYWLS------NDYGERFSI-SRQGDISLMQCLDYETEDSYRFTV 115
             +L V     RD+     ++      N++G +FSI S+ G I +++ LDYE+   Y  TV
Sbjct: 3248 EVLQVYAAS-RDIEANAEITYSIISGNEHG-KFSIDSKTGAIFIIENLDYESSHEYYLTV 3305

Query: 116  YATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAAD 172
             ATD     ++  ATV+I+V ++ND  P F    Y   +    + + +  +V+   + AD
Sbjct: 3306 EATDGGTPSLSDVATVSINVTDINDNAPVFSQDTYTAVVSEDAVLEQSVITVMA--DDAD 3363

Query: 173  GDKGDRVTLS-LRGPYEKMFSINDS-GHISIVDLSALNTSTIQ---LVVVATDTGNPPR 226
            G     +  + + G     F+I+ + G + +  L  L+  TI    L V A+D G+PPR
Sbjct: 3364 GPSNSHIHYAIIDGNQGSPFTIDPARGEVKVTKL--LDRETISGYTLTVQASDNGSPPR 3420



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 56/196 (28%), Positives = 92/196 (46%), Gaps = 23/196 (11%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLS-NDYGERFSIS-RQGDISLMQC 102
            F K  YS    EN  ++  ++ V  N P  L+V Y ++  D   +F+++   G IS++  
Sbjct: 2182 FEKPFYSAEIPENAQLHSPVVHVQANSPEGLKVHYSITEGDPFSQFTVNFNTGVISVVAP 2241

Query: 103  LDYETEDSYRFTVYATDTLMTTSATVNISVV--NVNDWDPRFRYPQYELFLPHIPLADLT 160
            LD+E+  +Y+ ++ ATD+L    A V + ++  ++ND  P F    Y           L+
Sbjct: 2242 LDFESHPAYKLSIRATDSLTGAHAEVFVDIIVEDINDNPPVFAQQSY--------ATTLS 2293

Query: 161  PGSVIG----KVEAADGDK--GDRVTLSLRGPYEK---MFSIND-SGHISIVD-LSALNT 209
              SVIG    +V A D D      ++  + G + K    F ++  +G IS+V  L     
Sbjct: 2294 EASVIGTSVVQVRATDADSEPNRGISYHMVGNHSKSHDHFHVDSGTGLISLVRTLDYEQF 2353

Query: 210  STIQLVVVATDTGNPP 225
               Q+ V A D G PP
Sbjct: 2354 RQHQISVRAVDGGMPP 2369



 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 56/237 (23%), Positives = 101/237 (42%), Gaps = 37/237 (15%)

Query: 11   ITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTN 70
             T  VRA+   +  R ++  + V      +R  +FS+  Y+ +  E++P+   +  +   
Sbjct: 2669 FTFFVRAVDNGSPQRESVVPVYVKVLPPEMRLPRFSEPFYTYTVSEDVPIGTEIDLIRAE 2728

Query: 71   KPRDLRVKYWLSN----DYGERFSISRQ-GDISLMQCLDYETEDSYRFTVYAT----DTL 121
                +       N    +  E F I RQ G + L + LD+ET   ++F+V A     D  
Sbjct: 2729 HSGTVLYSLVKGNTPESNRDEFFVIDRQSGRLKLEKSLDHETTKWFQFSVLARCTHGDYE 2788

Query: 122  MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTL 181
            +  S  V+I V + ND  P      YE F+    + +L  GS + ++ A+D D G    +
Sbjct: 2789 LVASVDVSIQVKDTNDNSPVLESSPYEAFI----VENLPAGSRVIQIRASDLDSGSNGQV 2844

Query: 182  SLRGPYEKMFSINDSGHISIVDLSALNTST----------------IQLVVVATDTG 222
                    M++++ S  + +++  A+N  T                 Q+ VVA+D G
Sbjct: 2845 --------MYNLDQSQSVDVIESFAVNMETGWITTLRELDHEKRDSYQIKVVASDHG 2893



 Score = 47.4 bits (111), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 41/137 (29%), Positives = 68/137 (49%), Gaps = 16/137 (11%)

Query: 50   YSVSALENLPVNYVLLTVTT---NKPRDLRVKYWL----SNDYGERFSISRQ-GDISLMQ 101
            Y    +ENLP    ++ +     +   + +V Y L    S D  E F+++ + G I+ ++
Sbjct: 2814 YEAFIVENLPAGSRVIQIRASDLDSGSNGQVMYNLDQSQSVDVIESFAVNMETGWITTLR 2873

Query: 102  CLDYETEDSYRFTVYATD----TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLA 157
             LD+E  DSY+  V A+D      ++++A V+++V +VND  PRF    Y+  +      
Sbjct: 2874 ELDHEKRDSYQIKVVASDHGEKVQLSSTAIVDVTVTDVNDSPPRFTAEIYKGTVSE---- 2929

Query: 158  DLTPGSVIGKVEAADGD 174
            D  PG VI  V   D D
Sbjct: 2930 DDPPGGVIAIVSTTDAD 2946



 Score = 45.4 bits (106), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 54/195 (27%), Positives = 88/195 (45%), Gaps = 20/195 (10%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTTNKPRDL----RVKYWLSNDYGERFSI-SRQGDIS 98
            +F +  Y V   E+  +N  ++ V     +DL     V+Y +  D  ++FSI S  G + 
Sbjct: 821  EFLQESYFVEVSEDKEINSEIIQVEATD-KDLGPNGHVRYSILTD-TDKFSIDSMTGVVK 878

Query: 99   LMQCLDYETEDSYRFTVYATDTL-----MTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
            ++  LD E +  +   V A D       + ++  + +S+ +VND  P+F  P Y + +  
Sbjct: 879  ILNPLDREEQQVHYLKVEARDQAREEPQLLSTVILKVSLDDVNDNPPKFIPPNYRVKV-- 936

Query: 154  IPLADLTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSIND-SGHISIV-DLSALNT 209
                DL  G++I  +EA D D G   +V  SL    E  F ++  SG + I+  L     
Sbjct: 937  --REDLPEGTIIMWLEAHDPDLGQSSQVRYSLLDHGEGNFDVDKLSGAVRIIQQLDFEKK 994

Query: 210  STIQLVVVATDTGNP 224
                L V A D G P
Sbjct: 995  QVYNLTVRAKDKGKP 1009



 Score = 42.7 bits (99), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 41/162 (25%), Positives = 74/162 (45%), Gaps = 14/162 (8%)

Query: 45   FSKNEYSVSALENLPVNYVLL--TVTTNKPRDLRVKYWLS----NDYGERFSISRQGDIS 98
            FS+  YS+   EN PV + +L   VT          ++ S    N+ G  F +++QG + 
Sbjct: 3440 FSRGNYSLIIQENKPVGFSVLQLVVTDRDSSHNGPPFFFSIVSGNEEGA-FEVNQQGALL 3498

Query: 99   LMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIP 155
                ++ + +D Y   V   D     +++   ++I V+  + + P       E+F+    
Sbjct: 3499 TAAAINRKVKDHYLLHVKVADNGKPQLSSLTYIDIRVIEESVYPPAIL--PLEIFI--TA 3554

Query: 156  LADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSG 197
              +   G VIGK+ A D D  D +T SL    + +FS++ +G
Sbjct: 3555 FGEEYSGGVIGKIHATDQDVYDTLTYSLDPQMDSLFSVSSTG 3596



 Score = 41.2 bits (95), Expect = 0.95,   Method: Compositional matrix adjust.
 Identities = 35/121 (28%), Positives = 59/121 (48%), Gaps = 9/121 (7%)

Query: 83   NDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRF 142
            ND+       + G I+L     +  + SY   V A+D +  +SA V+++V+  N   P F
Sbjct: 2433 NDHKNFVIDGKTGIITLSNLRRHALKPSYSLQVSASDGVFRSSAQVHVTVIGGNLHSPLF 2492

Query: 143  RYPQYELFLPHIPLADLTP-GSVIGKVEAADGDKG--DRVTLSLRGPYEK-MFSINDSGH 198
               +YE     + LA+  P  +++ +V+A+DGD G    VT  +   + K  F  N+ G 
Sbjct: 2493 LQNEYE-----VELAENAPLHTLVTEVKASDGDSGIYGHVTYHIVNDFAKDRFYTNERGQ 2547

Query: 199  I 199
            I
Sbjct: 2548 I 2548



 Score = 40.8 bits (94), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 54/191 (28%), Positives = 83/191 (43%), Gaps = 30/191 (15%)

Query: 56   ENLPVNYVLLTVTTNKP---RDLRVKYWLSNDYG-ERFSISRQ-GDISLMQCLDYETEDS 110
            EN P+   ++ V+       RD  + Y + +  G   F I  + G I     LD E+   
Sbjct: 1045 ENAPLGSSVMKVSARDEDMGRDGEIHYSIRDGSGVGVFRIDEETGVIETSDRLDRESTSH 1104

Query: 111  YRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSV-IG 166
            Y  TVYA+D     +++   V I V +VND  P+   P   ++ P I   + +P  V + 
Sbjct: 1105 YWLTVYASDQGVVPLSSFVEVYIEVEDVNDNAPQTSEP---VYYPEI--MENSPKDVSVV 1159

Query: 167  KVEAADGDKGDRVTLSLRGPYEKMFSINDSGHISIVDLSALNTSTIQ-----------LV 215
            ++EA D D      L+      K+ S N  G  SI   + L T+T +           L 
Sbjct: 1160 QIEAFDPDSSSDDKLTY-----KITSGNPQGFFSINSKTGLITTTARKLDREQQDEHILE 1214

Query: 216  VVATDTGNPPR 226
            V  TD G+PP+
Sbjct: 1215 VTVTDNGSPPK 1225



 Score = 39.7 bits (91), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 55/215 (25%), Positives = 89/215 (41%), Gaps = 19/215 (8%)

Query: 24  DRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLR---VKYW 80
           DR A   ++V     +    +F++  Y  S  EN+P+   +++V+   P +     V Y 
Sbjct: 442 DRKASTRVLVKVLSANSHPPEFTQTAYKASFDENVPIGTTVMSVSAVDPDEGENGYVTYS 501

Query: 81  LSNDYGERFSISR-QGDISLMQCLDYE-TEDSYRFTVYATDTLMTTSATVNI----SVVN 134
           ++N     F I+   G +S  + LDYE     Y   + A+D        + I    ++ N
Sbjct: 502 IANLNHVPFVINHFTGAVSTSENLDYELMPRVYTLRIRASDWGSPYRREIEILATLTLNN 561

Query: 135 VNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYE-KMFSI 193
           +ND  P F     E  +P     DL  G  I  V A D D+   V   +    E  +FS+
Sbjct: 562 LNDNTPLFEKINCEGTIPR----DLGVGEQITTVSAIDADELQLVRYQIEAGNELDLFSL 617

Query: 194 NDSGHI-----SIVDLSALNTSTIQLVVVATDTGN 223
           N +  +     S++D      S   L + ATD  N
Sbjct: 618 NPNSGVLSLKQSLMDGLGAKVSFHSLRITATDGEN 652


>gi|440909686|gb|ELR59571.1| Cadherin EGF LAG seven-pass G-type receptor 2 [Bos grunniens mutus]
          Length = 2919

 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 68/219 (31%), Positives = 101/219 (46%), Gaps = 22/219 (10%)

Query: 25  RYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWL 81
           R ALATL +    T+  +  F + EY  S  ENL V Y +LTV     + P +  + Y L
Sbjct: 266 RSALATLTILVTDTNDHDPVFEQQEYKESLRENLEVGYEVLTVRATDGDAPPNANILYRL 325

Query: 82  SNDYG----ERFSIS-RQGDISLMQCLDYETEDSYRFTVYATDT-----LMTTSATVNIS 131
               G    E F I  R G I     +D E  +SY+ TV A+D        T +A + +S
Sbjct: 326 LEGSGGSPSEVFEIDPRSGVIRTRGPVDREEVESYQLTVEASDQGRDPGPRTATAAIFLS 385

Query: 132 VVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYE 188
           V + ND  P+F   +Y + +      D++PG+ + +V A+D DKG    +    + G   
Sbjct: 386 VEDDNDNAPQFSEKRYVVQV----REDVSPGAPVLRVTASDRDKGSNALVHYSIMSGNAR 441

Query: 189 KMFSIN-DSGHISIVD-LSALNTSTIQLVVVATDTGNPP 225
             F ++  +G + +V  L    T    L V A D G PP
Sbjct: 442 GQFYLDAQTGALDVVSPLDYETTKEYTLRVRAQDGGRPP 480



 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 49/171 (28%), Positives = 80/171 (46%), Gaps = 15/171 (8%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGERFSIS---RQGDIS 98
           F    +  + LE++P+ Y++L V     +   + R++Y L+   G  F  +     G IS
Sbjct: 502 FVSTPFQATVLESVPLGYLVLHVQAIDADAGDNARLEYRLAG-VGHDFPFTINNGTGWIS 560

Query: 99  LMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIP 155
           +   LD E  D Y F V A D     +T SA+V++++++VND +P F  P+Y + L    
Sbjct: 561 VAAELDREEVDFYSFGVEARDHGTPALTASASVSVTILDVNDNNPTFTQPEYTVRLNE-- 618

Query: 156 LADLTPGSVIGKVEAADGDKGDRVTLSL-RGPYEKMFSINDSGHISIVDLS 205
             D   G+ +  V A D D    +T  +  G     FSI       +V L+
Sbjct: 619 --DAAVGTSVVTVSAVDRDAHSVITYQITSGNTRNRFSITSQSGGGLVSLA 667



 Score = 45.4 bits (106), Expect = 0.051,   Method: Compositional matrix adjust.
 Identities = 51/189 (26%), Positives = 86/189 (45%), Gaps = 14/189 (7%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRDLR--VKYWL-SNDYGERFSISRQ---GDIS 98
           F++ EY+V   E+  V   ++TV+    RD    + Y + S +   RFSI+ Q   G +S
Sbjct: 607 FTQPEYTVRLNEDAAVGTSVVTVSAVD-RDAHSVITYQITSGNTRNRFSITSQSGGGLVS 665

Query: 99  LMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLAD 158
           L   LDY+ E  Y   V A+D     +A V ++V + N   P F+   Y + +      D
Sbjct: 666 LALPLDYKLERQYVLAVTASDGTRQDTAQVVVNVTDANTHRPVFQSSHYTVNINE----D 721

Query: 159 LTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSINDSGHISI-VDLSALNTSTIQLV 215
              G+ +  + A D D G+  R+T  +     +     D+G ++   +L   +  +  L 
Sbjct: 722 RPAGTTVVLISATDEDTGENARITYFMEDSIPQFRIDADTGAVTTQAELDYEDQVSYTLA 781

Query: 216 VVATDTGNP 224
           + A D G P
Sbjct: 782 ITARDNGIP 790



 Score = 44.3 bits (103), Expect = 0.095,   Method: Compositional matrix adjust.
 Identities = 40/149 (26%), Positives = 69/149 (46%), Gaps = 10/149 (6%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWL-SNDYGERFSIS-RQGDISL 99
            F ++E+ V   EN P+   +  VT   P +    ++ Y +   +  E F +    G+++ 
Sbjct: 918  FEQDEFDVFVEENSPIGLAVARVTATDPDEGTNAQIMYQIVEGNIPEVFQLDIFSGELTA 977

Query: 100  MQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPH--IPLA 157
            +  LDYE    Y   + AT   + + ATV++ +++ ND  P      +E+   +     +
Sbjct: 978  LVDLDYEDRPEYVLVIQATSAPLVSRATVHVRLLDRNDNPPVLG--NFEILFNNYVTNRS 1035

Query: 158  DLTPGSVIGKVEAADGDKGDRVTLSL-RG 185
               PG  IG+V A D D  D +T S  RG
Sbjct: 1036 SSFPGGAIGRVPAHDPDISDSLTYSFERG 1064


>gi|301767670|ref|XP_002919249.1| PREDICTED: LOW QUALITY PROTEIN: cadherin EGF LAG seven-pass G-type
           receptor 2-like [Ailuropoda melanoleuca]
          Length = 2924

 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 69/219 (31%), Positives = 101/219 (46%), Gaps = 22/219 (10%)

Query: 25  RYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWL 81
           R ALATL +    T+  +  F + EY  S  ENL V Y +LTV     + P +  + Y L
Sbjct: 270 RSALATLTILVTDTNDHDPVFEQQEYKESLRENLEVGYEVLTVRATDGDAPPNANILYRL 329

Query: 82  SNDYG----ERFSIS-RQGDISLMQCLDYETEDSYRFTVYATDT-----LMTTSATVNIS 131
               G    E F I  R G I     +D E  +SY+ TV A+D        + +A V +S
Sbjct: 330 LEGPGGSPSEIFEIDPRSGVIRTRGPVDREEVESYQLTVEASDQGRDPGPRSATAAVFLS 389

Query: 132 VVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYE 188
           V + ND  P+F   +Y + +      D+TPG+ + +V A+D DKG    +    + G   
Sbjct: 390 VEDDNDNAPQFSEKRYVVQV----REDVTPGAPVLRVTASDRDKGSNALVHYSIMSGNAR 445

Query: 189 KMFSIN-DSGHISIVD-LSALNTSTIQLVVVATDTGNPP 225
             F ++  +G + +V  L    T    L V A D G PP
Sbjct: 446 GQFYLDAQTGALDVVSPLDYETTKEYTLRVRAQDGGRPP 484



 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 49/171 (28%), Positives = 81/171 (47%), Gaps = 15/171 (8%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGERFSIS---RQGDIS 98
           F    +  + LE++P+ Y++L V     +   + R++Y L+   G  F  +     G IS
Sbjct: 506 FVSTPFQATVLESVPLGYLVLHVQAIDADAGDNARLEYRLAG-VGHDFPFAINNGTGWIS 564

Query: 99  LMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIP 155
           +   LD E  D Y F V A D    ++T SA+V++++++VND +P F  P+Y + L    
Sbjct: 565 VAAELDREEVDFYSFGVEARDHGTPMLTASASVSVTILDVNDNNPTFTQPEYTVRLNE-- 622

Query: 156 LADLTPGSVIGKVEAADGDKGDRVTLSL-RGPYEKMFSINDSGHISIVDLS 205
             D   G+ +  V A D D    +T  +  G     FSI       +V L+
Sbjct: 623 --DAAVGTSVVTVSAVDRDAHSVITYQITSGNTRNRFSITSQSGGGLVSLA 671



 Score = 45.1 bits (105), Expect = 0.058,   Method: Compositional matrix adjust.
 Identities = 51/189 (26%), Positives = 86/189 (45%), Gaps = 14/189 (7%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRDLR--VKYWL-SNDYGERFSISRQ---GDIS 98
           F++ EY+V   E+  V   ++TV+    RD    + Y + S +   RFSI+ Q   G +S
Sbjct: 611 FTQPEYTVRLNEDAAVGTSVVTVSAVD-RDAHSVITYQITSGNTRNRFSITSQSGGGLVS 669

Query: 99  LMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLAD 158
           L   LDY+ E  Y   V A+D     +A V ++V + N   P F+   Y + +      D
Sbjct: 670 LALPLDYKLERQYVLAVTASDGTRQDTAQVVVNVTDANTHRPVFQSSHYTVNVNE----D 725

Query: 159 LTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSINDSGHISI-VDLSALNTSTIQLV 215
              G+ +  + A D D G+  R+T  +     +     D+G ++   +L   +  +  L 
Sbjct: 726 RPAGTTVVLISATDEDTGENARITYFMEDSIPQFRIDADTGAVTTQAELDYEDQVSYTLA 785

Query: 216 VVATDTGNP 224
           + A D G P
Sbjct: 786 ITARDNGIP 794



 Score = 44.3 bits (103), Expect = 0.093,   Method: Compositional matrix adjust.
 Identities = 40/149 (26%), Positives = 69/149 (46%), Gaps = 10/149 (6%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWL-SNDYGERFSIS-RQGDISL 99
            F ++E+ V   EN P+   +  VT   P +    ++ Y +   +  E F +    G+++ 
Sbjct: 922  FEQDEFDVFVEENSPIGLAVARVTATDPDEGTNAQIMYQIVEGNIPEVFQLDIFSGELTA 981

Query: 100  MQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPH--IPLA 157
            +  LDYE    Y   + AT   + + ATV++ +++ ND  P      +E+   +     +
Sbjct: 982  LVDLDYEDRPEYILVIQATSAPLVSRATVHVRLLDRNDNPPVLG--NFEILFNNYVTNRS 1039

Query: 158  DLTPGSVIGKVEAADGDKGDRVTLSL-RG 185
               PG  IG+V A D D  D +T S  RG
Sbjct: 1040 SSFPGGAIGRVPAHDPDISDSLTYSFERG 1068


>gi|336244973|gb|AEI28404.1| FAT tumor suppressor-like protein 4, partial [Naja atra]
          Length = 254

 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 53/191 (27%), Positives = 98/191 (51%), Gaps = 10/191 (5%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNK-PRDLRVKYWLS-NDYGERFSISRQ-GDISLMQ 101
           F++  YS    EN+ + Y + +V+ +    ++ + Y ++  D    F I++  G I+   
Sbjct: 4   FTQEIYSFVVFENVALGYHVGSVSAHTMDLNINITYLITTGDQKGMFEINKMTGLITTSS 63

Query: 102 CLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTP 161
            +D E +  Y+    A+   +T  A VNI+V ++ND  P F +    + +    + +   
Sbjct: 64  IIDREEQAFYQLKAVASGGTITGDALVNITVRDLNDNSPHFLHAVESVNV----VENWNT 119

Query: 162 GSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIND-SGHISIVDLSALNTSTIQLVVVA 218
           G  I + +A D D+G   RV  SL+   + +FSI++ SG IS+  L  +N  + Q+ ++A
Sbjct: 120 GHTIFQAKAVDPDEGANGRVAYSLKQNPKNLFSIDEQSGAISLTGLLDVNDGSYQVEIMA 179

Query: 219 TDTGNPPRQAS 229
           +D G P R +S
Sbjct: 180 SDLGVPERSSS 190



 Score = 38.9 bits (89), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 41/134 (30%), Positives = 62/134 (46%), Gaps = 14/134 (10%)

Query: 51  SVSALENLPVNYVLLTVTTNKPRDL---RVKYWLSNDYGERFSISRQ-GDISLMQCLDYE 106
           SV+ +EN    + +       P +    RV Y L  +    FSI  Q G ISL   LD  
Sbjct: 110 SVNVVENWNTGHTIFQAKAVDPDEGANGRVAYSLKQNPKNLFSIDEQSGAISLTGLLDV- 168

Query: 107 TEDSYRFTVYATDTLM---TTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTP-G 162
            + SY+  + A+D  +   ++S  + +SV +VND  P F    YE+      +++L P  
Sbjct: 169 NDGSYQVEIMASDLGVPERSSSFILTVSVHDVNDNPPVFDQISYEVI-----ISELEPVN 223

Query: 163 SVIGKVEAADGDKG 176
           S    V A+D D G
Sbjct: 224 SRFFSVHASDKDSG 237


>gi|85725319|gb|ABC79277.1| protocadherin-15-CD3 isoform 2 [Mus musculus]
          Length = 1677

 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 61/195 (31%), Positives = 99/195 (50%), Gaps = 14/195 (7%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGER-FSISRQ-GDISLMQ 101
           +F +  YS+   E + +  +LL +         + Y + N   +R F++S   G +SL +
Sbjct: 615 RFPQLMYSLEVSEAMRIGAILLNLQATDREGDPITYAIENGDPQRVFNLSETTGILSLGK 674

Query: 102 CLDYETEDSYRFTVYATDTL--MTTSATVNISVVNVNDWDPRFRYPQYELFLP-HIPLAD 158
            LD E+ D Y   V A+D     T++ATVNI V +VND  P F     + +LP ++ + +
Sbjct: 675 ALDRESTDRYILIVTASDGRPDGTSTATVNIVVTDVNDNAPVF-----DPYLPRNLSVVE 729

Query: 159 LTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDSGHI-SIVDLSALNTSTIQLV 215
               + +G+V A D D G   +V  SL G +  +F I  +G I + V L+       +LV
Sbjct: 730 EEANAFVGQVRATDPDAGINGQVHYSL-GNFNNLFRITSNGSIYTAVKLNREARDHYELV 788

Query: 216 VVATDTGNPPRQASV 230
           VVATD    PR +++
Sbjct: 789 VVATDGAVHPRHSTL 803



 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 65/245 (26%), Positives = 110/245 (44%), Gaps = 35/245 (14%)

Query: 6   DFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVL- 64
           DF Q   LV++A Q +     A A+L +     + +   F+   Y    LE+ PV   + 
Sbjct: 356 DFHQKFDLVIKAEQDNGHPLPAFASLHIEILDENNQSPYFTMPSYQGYILESAPVGATIS 415

Query: 65  --LTVTT-----------NKPRDLRVKYWLSNDYGERFSISRQG---DISLMQCLDYETE 108
             L +TT              +D  +  +L NDY   F+++  G    ++L+Q +D E +
Sbjct: 416 ESLNLTTPLRIVALDKDIEDTKDPELHLFL-NDYTSVFTVTPTGITRYLTLLQPVDREEQ 474

Query: 109 DSYRFTVYATDTLMTTS-ATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGK 167
            +Y F + A D +  +    VNI V++ ND  P F    Y++++      D++PG  + +
Sbjct: 475 QTYTFLITAFDGVQESEPVVVNIRVMDANDNTPTFPEISYDVYV----YTDMSPGDSVIQ 530

Query: 168 VEAADGDKGDRVTLSLRGPYEKM------FSIND-SGHISIV-DLSALNTSTIQLVVVAT 219
           + A D D+G    +S    YE +      F IN  +G +SI   +  +   T  L V A+
Sbjct: 531 LTAVDADEGSNGEIS----YEILVGGKGDFVINKTTGLVSIAPGVELIVGQTYALTVQAS 586

Query: 220 DTGNP 224
           D   P
Sbjct: 587 DNAPP 591



 Score = 47.8 bits (112), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 70/233 (30%), Positives = 103/233 (44%), Gaps = 26/233 (11%)

Query: 13   LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKP 72
            LVV A       R++  TL +           F+ + Y+V   ENLP     L +   K 
Sbjct: 787  LVVVATDGAVHPRHSTLTLYIKVLDIDDNSPVFTNSTYTVVVEENLPAGTSFLQIEA-KD 845

Query: 73   RDL--RVKYWL-SNDYGERFSISR-QGDISLMQCLDYET----EDSYRFTVYATD---TL 121
             DL   V Y + S +    F++    G++SL++ LDYE     E S  F   A D   T+
Sbjct: 846  VDLGANVSYRIRSPEVKHLFALHPFTGELSLLRSLDYEAFPDQEASITFLAEAFDIYGTM 905

Query: 122  MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDK----GD 177
                ATV + V ++ND+ P F    Y+  +      D   G+ I  V A D D       
Sbjct: 906  PPGIATVTVIVKDMNDYPPVFSKRIYKGMV----APDAVKGTPITTVYAEDADPPGMPAS 961

Query: 178  RVTL---SLRGPY-EKMFSIN-DSGHI-SIVDLSALNTSTIQLVVVATDTGNP 224
            RV      ++ PY   +F +  DSG + + V+L+   T+  +LVVVA D G P
Sbjct: 962  RVRYRVDDVQFPYPASIFDVEEDSGRVVTRVNLNEEPTTIFKLVVVAFDDGEP 1014


>gi|444512234|gb|ELV10086.1| Cadherin-23 [Tupaia chinensis]
          Length = 3381

 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 59/195 (30%), Positives = 91/195 (46%), Gaps = 20/195 (10%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWLSNDYGERFSIS-RQGDISLM 100
            F +  Y  +  E++PV  V+LTVT           ++Y L +  G +F+I+   GDI ++
Sbjct: 2372 FDQPSYQEAVFEDVPVGTVILTVTATDADSGNFALIEYSLGDGEG-KFAINPTTGDIYVL 2430

Query: 101  QCLDYETEDSYRFTVYATDT-------LMTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
              LD E ++ Y  T  A D            S  V I V++VND  P+F  PQ+   +  
Sbjct: 2431 SSLDREKKNHYILTALAKDNPGDVASNRRENSVQVVIQVLDVNDCRPQFSKPQFSTSV-- 2488

Query: 154  IPLADLTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSIN-DSGHISIVDLSALNTS 210
                +   G+ +  + A D D+G    +T SL GP  + F ++ DSG ++       +  
Sbjct: 2489 --YENEPAGTSVITMMATDQDEGSNGELTYSLEGPGMEAFDVDVDSGLVT-TQRPLQSYE 2545

Query: 211  TIQLVVVATDTGNPP 225
               L VVATD G PP
Sbjct: 2546 RFNLTVVATDGGQPP 2560



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 68/218 (31%), Positives = 101/218 (46%), Gaps = 44/218 (20%)

Query: 45  FSKNEYSVSALENLPVNY-VLLTVTTNKPRDLRVKYWLSNDYGE-----------RFSI- 91
           FSK  Y VS +EN+     VL    T+  R        S +YG+           RF I 
Sbjct: 643 FSKPAYFVSVVENIMAGATVLFLNATDLDR--------SREYGQESIIYSLEGSSRFRIN 694

Query: 92  SRQGDISLMQCLDYETEDSYRFTVYATD-----TLMTTSATVNISVVNVNDWDPRFRYPQ 146
           +R G+I+    LD ET+  Y   V A D        T  ATVNI+++++ND  P ++   
Sbjct: 695 ARSGEITTTSLLDRETKSEYILIVRAVDGGVGHNQKTGIATVNITLLDINDNHPTWKDAP 754

Query: 147 YELFLPHIPLADLT-PGSVIGKVEAADGDKGDRVTL--SLRGPYEKMFSIND-SGHIS-- 200
           Y     +I L ++T P S +  V A D D G+  TL  S++ P  K +S+N  +G I   
Sbjct: 755 Y-----YINLVEMTPPDSDVTTVVAVDPDLGENGTLVYSIQPP-NKFYSLNSTTGKIRTT 808

Query: 201 --IVDLSALNTSTIQL----VVVATDTGNPPRQASVPA 232
             ++D    +    +L    +V  TD G PP +A+  A
Sbjct: 809 HVMLDRENPDPHEAELMRKIIVSVTDCGRPPLRATSSA 846



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 65/210 (30%), Positives = 97/210 (46%), Gaps = 28/210 (13%)

Query: 45  FSKNEYSVSALENLPVNYVLLTV--TTNKPRDL-RVKYWLSNDYGERFSISRQ-GDISLM 100
           FS+  Y+VS  EN  V   +LTV  T N       V Y+ S+D  +RFS+ +  G I L+
Sbjct: 432 FSQPLYNVSLYENATVGTSVLTVLATDNDVGTFGEVNYFFSDD-PDRFSLDKDTGLIMLI 490

Query: 101 QCLDYETEDSYRFTVYATDTL-MTTSATVNISVVNVNDWDPRFRYPQYELFL----PHIP 155
             LDYE    +  TV A D     T+  V I+V++VND  P F+   Y   L    P + 
Sbjct: 491 ARLDYELIQRFTLTVIARDGGGEETTGRVRINVLDVNDNVPTFQKDAYVGALRENEPSV- 549

Query: 156 LADLTPGSVIGKVEAADGDK--GDRVTLSL-----RGPYEKMFSINDSGHISI---VDLS 205
                  + + ++ A D D    +++T S+      G Y  +      G IS+   +D  
Sbjct: 550 -------TQLVRLRATDEDSPPNNQITYSIVNASAFGSYFDISVYEGYGVISVSRPLDYE 602

Query: 206 ALNTSTIQLVVVATDTGNPPRQASVPAIMH 235
            +    I L V+A D GNPP  ++VP  + 
Sbjct: 603 QIPNGLIYLTVMAKDAGNPPLNSTVPVTIE 632



 Score = 48.9 bits (115), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 45/141 (31%), Positives = 66/141 (46%), Gaps = 15/141 (10%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDY---GERFSI-SRQGDISLM 100
           F    YSV   EN PV   +  V    P DL     +   +    + F+I S +G ++++
Sbjct: 106 FHNQPYSVRIPENTPVGTPIFIVNATDP-DLGAGGSVLYSFQPPSQFFAIDSARGIVTVI 164

Query: 101 QCLDYETEDSYRFTVYATDT----LMTTSATVNISVVNVNDWDPRF-RYPQYELFLPHIP 155
           + LDYET  +Y+ TV ATD      ++T A + I + +V D DP F   P       H P
Sbjct: 165 RELDYETTQAYQLTVNATDQDKTRPLSTLANLAIIITDVQDMDPIFINLPYSTNIYEHSP 224

Query: 156 LADLTPGSVIGKVEAADGDKG 176
                PG+ +  + A D DKG
Sbjct: 225 -----PGTTVRVITAIDQDKG 240



 Score = 46.6 bits (109), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 60/203 (29%), Positives = 91/203 (44%), Gaps = 24/203 (11%)

Query: 43   LQFSKNEYSVSALENLPVNYVLLTVTTNKPRDL-----RVKYWLSNDYGERFSI-SRQGD 96
            +QFS   Y  + LENL +   ++ V      +L     R   + S      F I +  G 
Sbjct: 1282 VQFSNASYEAAILENLALGTEIVRVQAYSIDNLNQITYRFDAYTSAQAKALFKIDALTGV 1341

Query: 97   ISLMQCLDYETEDSYRFTVYATDTLMTTSATV-NISVVNVNDWDPRFRYPQYELFLPHIP 155
            I++   +D E  D Y  TV A D      +TV  I+V++ ND  PRF +         +P
Sbjct: 1342 ITVKGQVDREKGDFYTLTVVADDGGPKVDSTVVYITVLDENDNSPRFDFTSDSAV--SVP 1399

Query: 156  LADLTPGSVIGKVEAADGDKGD--RVTLSLR-----GPYEKMFSINDS-GHISI---VDL 204
              D   G  +  V+A D D G   +V  SL      G +E + + NDS G + +   +D 
Sbjct: 1400 -EDCPVGQRVATVKAQDPDAGSNGQVVFSLASGNIAGAFE-IITTNDSIGEVFVARPLDR 1457

Query: 205  SALNTSTIQLVVVATDTGNPPRQ 227
              L+   ++  VVA+D G PPR+
Sbjct: 1458 EELDHYILK--VVASDCGTPPRK 1478



 Score = 42.7 bits (99), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 53/197 (26%), Positives = 87/197 (44%), Gaps = 24/197 (12%)

Query: 44  QFSKNEYSVSALENLPVNYVL----LTVTTNKPRDLRVKYWLSNDYGERF-----SISRQ 94
           +F+ +EYSV+  E   V + L      V  ++  +   + +L  +    F     S+  +
Sbjct: 321 EFNSSEYSVAITELAQVGFALPLFIQVVDKDEGLNSMFEVYLVGNNSHHFIISPTSVQGK 380

Query: 95  GDISLMQC--LDYETEDSYRFTVYATDTL--MTTSATVNISVVNVNDWDPRFRYPQYELF 150
            DI +     LDYET D Y F ++A +++      A V I+++N ND  P F  P Y + 
Sbjct: 381 ADIRIRVAIPLDYETVDRYDFDLFANESVPDHVGYAKVKIALINENDNRPIFSQPLYNVS 440

Query: 151 LPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDSGHISIVDLSALN 208
           L      + T G+ +  V A D D G    V        ++     D+G I ++  + L+
Sbjct: 441 L----YENATVGTSVLTVLATDNDVGTFGEVNYFFSDDPDRFSLDKDTGLIMLI--ARLD 494

Query: 209 TSTIQ---LVVVATDTG 222
              IQ   L V+A D G
Sbjct: 495 YELIQRFTLTVIARDGG 511



 Score = 42.7 bits (99), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 45/142 (31%), Positives = 65/142 (45%), Gaps = 20/142 (14%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVT-TNKPRDL--RVKYWLSNDYGERFSIS------RQG 95
            FS    +V  LEN P    +L VT T+    L   + Y +     +RF I       R G
Sbjct: 2039 FSPAVLTVHLLENCPPGVSVLQVTATDDDSGLNGELVYRIEAGAQDRFLIHPVTGVIRVG 2098

Query: 96   DISLMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLP 152
            + ++    D E +DSYR TV ATD     ++ +A V + + ++ND  P F  P   + + 
Sbjct: 2099 NATI----DREEQDSYRLTVVATDRGTVPLSGTAIVTVLIEDINDSRPEFINPIQTVSV- 2153

Query: 153  HIPLADLTPGSVIGKVEAADGD 174
               L    PG+VI  V A D D
Sbjct: 2154 ---LESAEPGTVIANVTAIDRD 2172



 Score = 41.6 bits (96), Expect = 0.57,   Method: Compositional matrix adjust.
 Identities = 67/283 (23%), Positives = 120/283 (42%), Gaps = 55/283 (19%)

Query: 4    EDDFL-QPITLVVRA----IQYDNQDRYALATLIVSK-----AGTSL-----RELQFSKN 48
            +D FL  P+T V+R     I  + QD Y L  +   +     +GT++      ++  S+ 
Sbjct: 2083 QDRFLIHPVTGVIRVGNATIDREEQDSYRLTVVATDRGTVPLSGTAIVTVLIEDINDSRP 2142

Query: 49   EY-----SVSALENLPVNYVLLTVTTNKPRDL--RVKYW----LSNDYGERFSISRQ--- 94
            E+     +VS LE+     V+  VT    RDL  +++Y     ++ D  +R    ++   
Sbjct: 2143 EFINPIQTVSVLESAEPGTVIANVTAID-RDLNPKLEYHIIDIMARDDTDRLVPGQEDAF 2201

Query: 95   ------GDISLMQCLDYETEDSYRFTVYATD--------TLMTTSATVNISVVNVNDWDP 140
                  G + +   L+ E   +Y  T+   D        ++   +A + +++++VND  P
Sbjct: 2202 AVNINTGSVIVKSPLNRELVATYEVTLSVIDNASDLPEHSVSVPNAKLTVNILDVNDNTP 2261

Query: 141  RFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG-----DRVTLSLRGPYEKMFSIND 195
            +F+      +   I L   TPG+ +  V A D DKG         L L  P       + 
Sbjct: 2262 QFKPFGITYYTERI-LEGATPGTTLIAVAAVDPDKGLNGLITYTLLDLMPPGYVQLEDSS 2320

Query: 196  SGHI---SIVDLSALNTSTIQLVVVATDTGNPPRQASVPAIMH 235
            +G +     VD   ++   +   V A+D G+PPR A +P  + 
Sbjct: 2321 AGKVIANRTVDYEEVHW--LNFTVRASDNGSPPRAAEIPVYLE 2361



 Score = 39.7 bits (91), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 33/107 (30%), Positives = 49/107 (45%), Gaps = 8/107 (7%)

Query: 92   SRQGDISLMQCLDYETEDSYRFTVYATDTLMTTSAT---VNISVVNVNDWDPRFRYPQYE 148
            S  G +   + +DYE      FTV A+D      A    V + +V++ND +P F  P Y+
Sbjct: 2319 SSAGKVIANRTVDYEEVHWLNFTVRASDNGSPPRAAEIPVYLEIVDINDNNPIFDQPSYQ 2378

Query: 149  LFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSIN 194
              +      D+  G+VI  V A D D G+   +    G  E  F+IN
Sbjct: 2379 EAV----FEDVPVGTVILTVTATDADSGNFALIEYSLGDGEGKFAIN 2421



 Score = 38.9 bits (89), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 43/131 (32%), Positives = 59/131 (45%), Gaps = 11/131 (8%)

Query: 95  GDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHI 154
           G + L Q LD ET+  +      +D     +  VNI V +VND  P F    Y + +P  
Sbjct: 59  GVVWLRQPLDRETKSEFTVEFSVSDHQGVITRKVNIQVGDVNDNAPTFHNQPYSVRIP-- 116

Query: 155 PLADLTP-GSVIGKVEAADGD--KGDRVTLSLRGPYEKMFSINDSGHISIV--DLSALNT 209
              + TP G+ I  V A D D   G  V  S + P  + F+I+ +  I  V  +L    T
Sbjct: 117 ---ENTPVGTPIFIVNATDPDLGAGGSVLYSFQPP-SQFFAIDSARGIVTVIRELDYETT 172

Query: 210 STIQLVVVATD 220
              QL V ATD
Sbjct: 173 QAYQLTVNATD 183



 Score = 37.7 bits (86), Expect = 8.6,   Method: Compositional matrix adjust.
 Identities = 61/235 (25%), Positives = 103/235 (43%), Gaps = 46/235 (19%)

Query: 65   LTVTTNKPRDLRVKYWLS---NDYG---------------ERFSIS-RQGDISLMQCLDY 105
            ++V+ + PR+ RV  WL+   ND G                +FS+  R   +  +  LD 
Sbjct: 974  VSVSEDVPREFRV-VWLNCTDNDVGLNAELSYFITGGNVDGKFSVGYRDAVVRTVVSLDR 1032

Query: 106  ETEDSYRFTVYATDT-----LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLT 160
            ET  +Y   + A D        T +AT  ++V++VND  P F    YE  +P     D+ 
Sbjct: 1033 ETTAAYTLILEAIDNGPVGKRRTGTATAFVTVLDVNDNRPIFLQSSYEASVPE----DIP 1088

Query: 161  PGSVIGKVEAADGDKGD--RVTLS-LRGPYEKMFSINDSGHISIVDLSALN---TSTIQL 214
             G  I +  A D D+G+  RV    L G +   F I+ S  + +     L+    S+  L
Sbjct: 1089 EGHSIVQA-ATDADEGEFGRVWYRILHGNHGNNFRIHVSNGLLMRGPRPLDRERNSSHVL 1147

Query: 215  VVVATDTGNPPRQASVPAIMHFPE------AIVQQASSKLN----SGTSSTVLII 259
            +V A +    P ++SV  I++  +         QQ  S+L     +G  ++V+++
Sbjct: 1148 IVEAYNHDLGPMRSSVRVIVYVEDVNDEAPVFTQQQYSRLGLRETAGIGTSVIVV 1202


>gi|431897173|gb|ELK06435.1| Protocadherin-7 [Pteropus alecto]
          Length = 1070

 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 61/203 (30%), Positives = 91/203 (44%), Gaps = 21/203 (10%)

Query: 37  GTSLRELQFSKNEYSVSALENLPVNYV--LLTVTTNKPRDLRVKYWLSNDYGERFSIS-R 93
           G S+ E+ F +N        N+P   V  +L    +  ++  + Y L +     F+I   
Sbjct: 537 GQSVVEVYFPEN--------NIPGERVATVLATDADSGKNAEIAYSLESSVMGIFAIDPD 588

Query: 94  QGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELF 150
            GDI +   LD E  D Y F V A D    ++  S TV + V + ND  P+F    +  +
Sbjct: 589 SGDILVNTVLDREQNDRYEFKVNAKDKGIPVLQGSTTVIVQVADKNDNAPKFMQDVFTFY 648

Query: 151 LPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSI-NDSGHI-SIVDLSAL 207
           +      +L P S +G V   D DKG    +SL       +FSI ND+G I S +     
Sbjct: 649 VKE----NLQPNSPVGMVTVMDADKGRNAEMSLYIEENSSIFSIENDTGTIYSTMSFDRE 704

Query: 208 NTSTIQLVVVATDTGNPPRQASV 230
           + +T    V A D G+PPR A+ 
Sbjct: 705 HQTTYTFRVKAVDGGDPPRSATA 727



 Score = 44.7 bits (104), Expect = 0.071,   Method: Compositional matrix adjust.
 Identities = 77/316 (24%), Positives = 135/316 (42%), Gaps = 46/316 (14%)

Query: 30  TLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVT---TNKPRDLRVKYWLSNDYG 86
           T+IV  A  +    +F ++ ++    ENL  N  +  VT    +K R+  +  ++  +  
Sbjct: 625 TVIVQVADKNDNAPKFMQDVFTFYVKENLQPNSPVGMVTVMDADKGRNAEMSLYIEEN-S 683

Query: 87  ERFSISRQ-GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRF 142
             FSI    G I      D E + +Y F V A D      + +ATV++ V++ ND  P  
Sbjct: 684 SIFSIENDTGTIYSTMSFDREHQTTYTFRVKAVDGGDPPRSATATVSLFVMDENDNAPTV 743

Query: 143 RYPQ---YELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIND- 195
             P+   Y L  P   +      +V+  V A D D G    L+   + G   K+F I+  
Sbjct: 744 TLPRNISYTLLPPSSNVR-----TVVATVLATDSDDGINADLNYSIVGGNPFKLFEIDST 798

Query: 196 SGHISIV-DLSALNTSTIQLVVVATDTGNPPRQASVPAIMHFPEA------IVQQASSKL 248
           SG +S+V  L+  +    +LVV   D+G P +  +    +   E+      I  Q +  L
Sbjct: 799 SGVVSLVGKLTQKHYGLHRLVVQVNDSGQPSQSTTTLVHVFVNESVSNATVIDSQIARSL 858

Query: 249 NSGTSSTVL-------------IILGVVLIVLGFVIILLILYIHKNKHTKN-NGPPGSSH 294
           ++  +  +              I++GVV  ++  ++I+LI+ + +   +KN NG      
Sbjct: 859 HTPLTQDIAGDPSYEISKQRLSIVIGVVAGIMTVILIILIVVMARYCRSKNKNGYEAGKK 918

Query: 295 SKNDSFLSNVILPEKH 310
              D F      P++H
Sbjct: 919 DHEDFF-----TPQQH 929



 Score = 43.1 bits (100), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 41/160 (25%), Positives = 72/160 (45%), Gaps = 26/160 (16%)

Query: 93  RQGDISLMQCLDYETEDSYRFTVY---ATDTLMTTSATVNISVVNVNDWDPRFRYPQYEL 149
           +Q  + +   LD E  DSY  T+      D   ++ A + + + +VND  PRF    YE 
Sbjct: 257 KQPQLIVKGALDREQRDSYELTLRVRDGGDPPRSSQAILRVLITDVNDNSPRFEKSVYEA 316

Query: 150 FLPHIPLADLTPGSVIGKVEAADGDKG---------DRVTLSLRGPYEKMFSIND-SGHI 199
            L      +  PG+ I ++ AAD D G            T S+R    ++  +++ SG +
Sbjct: 317 DLAE----NSAPGTPILQLRAADLDVGVNGQIEYVFGAATESVR----RLLRLDETSGWL 368

Query: 200 SI---VDLSALNTSTIQLVVVATDTGNPPRQASVPAIMHF 236
           S+   +D   +N   ++  V+A D G PP+      +++ 
Sbjct: 369 SVLHRIDREEVN--QLRFTVMARDRGQPPKTDKATVVLNI 406


>gi|63994831|gb|AAY41019.1| unknown [Homo sapiens]
          Length = 959

 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 78/301 (25%), Positives = 132/301 (43%), Gaps = 33/301 (10%)

Query: 11  ITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVN--------- 61
            TL V+A   + +  ++ A + VS    +    QF  + +S    ENLP++         
Sbjct: 324 FTLTVQASDAEKK-HFSFAVVFVSVLDDNDHAPQFMFSSFSCIVPENLPISSTICSINAL 382

Query: 62  ------YVLLTVTTNKPRDLRVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTV 115
                 Y  LT +   P    + + +S D+         GDI   Q LDYE  + Y  TV
Sbjct: 383 DFDAGPYGELTYSIVSP--CFLTHGMSYDHDLFLIDPLTGDIHAKQILDYENGNKYCLTV 440

Query: 116 YATDTL-MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGD 174
            A D    T S  V + +  +++++P F   QY   LP           +IG+VEA+D D
Sbjct: 441 QAKDKGDATASLVVWVDIEGIDEFEPIFTQDQYFFTLPE----KNKDRQLIGRVEASDAD 496

Query: 175 KG-DRVTLSLRGPYEKMFSINDS-GHISIVDL-----SALNTS-TIQLVVVATDTGNPPR 226
            G D V L   G     FS+N + G+I ++       S LN   T+++ ++A    +  +
Sbjct: 497 AGIDGVILYSLGTSSPFFSVNKTNGNIYLIRALPLIKSQLNKEDTLEMKIIAHSPKSDSK 556

Query: 227 QASVPAIMHFPEAIVQQASSKLNSGTSSTVLIILGVVLIVLGFVIILLILYIHKNKHTKN 286
            AS    ++   +      +   S  S ++++   V LI++  +I++++   HK K T N
Sbjct: 557 FASCTVFVNVSFSSEGTPLAVFASSFSISLVVSFLVFLILICILIVMILR--HKQKDTIN 614

Query: 287 N 287
           N
Sbjct: 615 N 615



 Score = 41.2 bits (95), Expect = 0.83,   Method: Compositional matrix adjust.
 Identities = 38/148 (25%), Positives = 66/148 (44%), Gaps = 19/148 (12%)

Query: 56  ENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTV 115
           EN  V Y +++  +     +  K++ S      +   + G + L+  LD E   S+   +
Sbjct: 169 ENTYVEYSIISGNSQNNFHVETKFFHS-----EYPYKQVGYLVLLHSLDREASASHELVI 223

Query: 116 YATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTP-GSVIGKVEAA 171
            A+D+    ++++A ++I V++VND  P F    Y     H  + + TP GS I  V A 
Sbjct: 224 LASDSGCPPLSSTAVISIQVLDVNDNPPNFSSLSY-----HTHVKESTPLGSHITVVSAN 278

Query: 172 DGDKGDRVTLSLRGPYEKMFSINDSGHI 199
           D D G    +        + S N+ GH 
Sbjct: 279 DRDTGSHAEIIYN-----IISGNEKGHF 301



 Score = 39.7 bits (91), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 41/152 (26%), Positives = 66/152 (43%), Gaps = 15/152 (9%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRD----LRVKYWL--SNDYGERFSISRQGDIS 98
           FS   Y     E+ P+   +  V+ N  RD      + Y +   N+ G  +     G + 
Sbjct: 253 FSSLSYHTHVKESTPLGSHITVVSAND-RDTGSHAEIIYNIISGNEKGHFYLEENTGVLY 311

Query: 99  LMQCLDYETEDSYRFTVYATDTLMT--TSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
           L++ LDYE    +  TV A+D      + A V +SV++ ND  P+F +  +   +P    
Sbjct: 312 LIKPLDYEKMTKFTLTVQASDAEKKHFSFAVVFVSVLDDNDHAPQFMFSSFSCIVPE--- 368

Query: 157 ADLTPGSVIGKVEAADGDKG--DRVTLSLRGP 186
            +L   S I  + A D D G    +T S+  P
Sbjct: 369 -NLPISSTICSINALDFDAGPYGELTYSIVSP 399


>gi|326673363|ref|XP_003199858.1| PREDICTED: protocadherin alpha-7-like [Danio rerio]
          Length = 794

 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 59/199 (29%), Positives = 95/199 (47%), Gaps = 23/199 (11%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKP---RDLRVKYWLSNDYGER----FSISR-QGD 96
           F+K+ YSV   EN PV   +L V    P   ++  V Y L ++   +    F ++   GD
Sbjct: 244 FTKDTYSVILNENTPVGTTILRVNATDPDEGQNGEVVYSLGHNVNYKLRKLFDVNPVTGD 303

Query: 97  ISLMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
           + +   LDYE +D Y+  + A+D     + T   + I + +VND +P+         +P 
Sbjct: 304 VIVTGLLDYEVKDKYQIDIQASDKGTVPLKTDKIITIKIADVNDNEPQIEVTSLSSTIPE 363

Query: 154 IPLADLTPGSVIGKVEAADGDKG--DRVTLSLRG--PYEKMFSINDSGHISIVDLSALNT 209
               D  PG+ +  +  +D D G   RVT SL    P++ M S  ++ + S+V  SAL+ 
Sbjct: 364 ----DSKPGTTVALISVSDLDSGINGRVTCSLTENIPFQLMPSSQENTY-SLVTTSALDR 418

Query: 210 STI---QLVVVATDTGNPP 225
            TI    + + A D G PP
Sbjct: 419 ETIAHYDITLEAKDAGQPP 437



 Score = 47.4 bits (111), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 62/263 (23%), Positives = 118/263 (44%), Gaps = 31/263 (11%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVT-----TNKPRDLRVKYWLSNDYGERFSI-----SR 93
           +FS + Y+   +EN      L +V+     T     +  + W       +F+      S 
Sbjct: 457 EFSSSPYAFYVMENNAPGKSLFSVSASDKDTGANSAVSYQIWRDGGAENKFTSFININSE 516

Query: 94  QGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYP----Q 146
            G+I  ++  D+ET  +++F + ATD+    ++++ TV + +++ ND  P   YP     
Sbjct: 517 NGEIYALKSFDFETSKTFQFHILATDSGSPSLSSNVTVYVFILDQNDNFPVILYPVSANG 576

Query: 147 YELFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYE-KMFSIND-SGHI-SI 201
               +  IP  ++  G ++ KV A D D G    +  SL+   E  +F+++  +G I ++
Sbjct: 577 SAEGVEEIP-RNVNAGHLVTKVRAYDADIGYNGWLLFSLQEVSEHNLFALDRYTGQIRTL 635

Query: 202 VDLSALNTSTIQLVVVATDTGNPPRQASVPAIMH-------FPEAIVQQASSKLNSGTSS 254
              +  + +  +LV++  D GN    A+   I+        F  + V+ A         +
Sbjct: 636 RSFTETDEAQHKLVILVKDNGNVSLSATATVIVKVVEPKEAFAASDVKNAEKDEEENNVT 695

Query: 255 TVLII-LGVVLIVLGFVIILLIL 276
             LII LG V ++    II+LI+
Sbjct: 696 FYLIITLGSVSVLFVISIIVLIV 718



 Score = 41.6 bits (96), Expect = 0.67,   Method: Compositional matrix adjust.
 Identities = 40/142 (28%), Positives = 66/142 (46%), Gaps = 17/142 (11%)

Query: 102 CLDYETEDSYRFTVYATDTL---MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLAD 158
            LD ET   Y  T+ A D     +++  +V + + +VND  P F    Y  ++    + +
Sbjct: 415 ALDRETIAHYDITLEAKDAGQPPLSSVKSVTVQISDVNDNSPEFSSSPYAFYV----MEN 470

Query: 159 LTPGSVIGKVEAADGDKGDRVTLSLR----GPYEKMFS--IN---DSGHISIVDLSALNT 209
             PG  +  V A+D D G    +S +    G  E  F+  IN   ++G I  +      T
Sbjct: 471 NAPGKSLFSVSASDKDTGANSAVSYQIWRDGGAENKFTSFININSENGEIYALKSFDFET 530

Query: 210 S-TIQLVVVATDTGNPPRQASV 230
           S T Q  ++ATD+G+P   ++V
Sbjct: 531 SKTFQFHILATDSGSPSLSSNV 552


>gi|12965351|gb|AAK07670.1| cadherin 23 [Mus musculus]
          Length = 3322

 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 60/195 (30%), Positives = 92/195 (47%), Gaps = 20/195 (10%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWLSNDYGERFSIS-RQGDISLM 100
            F +  Y  +  E++ V  V+L VT           ++Y L +  G +F+I+   GDIS++
Sbjct: 2405 FDQPSYQEAVFEDIAVGTVILRVTATDADSGNFALIEYSLVDGEG-KFAINPNTGDISVL 2463

Query: 101  QCLDYETEDSYRFTVYATDT-------LMTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
              LD E +D Y  T  A D            S  V I V++VND  P+F  PQ+   +  
Sbjct: 2464 SSLDREKKDHYILTALAKDNPGDVASNRRENSVQVVIRVLDVNDCRPQFSKPQFSTSV-- 2521

Query: 154  IPLADLTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSIN-DSGHISIVDLSALNTS 210
                +   G+ +  + A D D+G   ++T SL GP  + FS++ DSG ++       +  
Sbjct: 2522 --YENEPAGTSVITMLATDQDEGSNSQLTYSLEGPGMEAFSVDMDSGLVT-TQRPLQSYE 2578

Query: 211  TIQLVVVATDTGNPP 225
               L VVATD G PP
Sbjct: 2579 RFNLTVVATDGGEPP 2593



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 67/217 (30%), Positives = 98/217 (45%), Gaps = 42/217 (19%)

Query: 45  FSKNEYSVSALENLPVNY-VLLTVTTNKPRDLRVKYWLSNDYGE-----------RFSI- 91
           FSK  Y VS LEN+     VL    T+  R        S +YG+           +F I 
Sbjct: 674 FSKPAYFVSVLENIMAGATVLFLNATDLDR--------SREYGQESIIYSLEGSSQFRIN 725

Query: 92  SRQGDISLMQCLDYETEDSYRFTVYATD-----TLMTTSATVNISVVNVNDWDPRFRYPQ 146
           +R G+I+    LD ET+  Y   V A D        T  ATVN++++++ND  P ++   
Sbjct: 726 ARSGEITTTSLLDRETKSEYILIVRAVDGGVGHNQKTGIATVNVTLLDINDNHPTWKDAP 785

Query: 147 YELFLPHIPLADLT-PGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSIND-SGHISI-- 201
           Y     +I L ++T P S +  V A D D G+  TL     P  K +S+N  +G I    
Sbjct: 786 Y-----YINLVEMTPPDSDVTTVVAVDPDLGENGTLVYSIHPPNKFYSLNSTTGKIRTTH 840

Query: 202 VDLSALNTSTIQ------LVVVATDTGNPPRQASVPA 232
           V L   N   ++      ++V  TD G PP +A+  A
Sbjct: 841 VMLDRENPDPVEAELMRKIIVSVTDCGRPPLKATSSA 877



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 65/210 (30%), Positives = 94/210 (44%), Gaps = 28/210 (13%)

Query: 45  FSKNEYSVSALENLPVNYVLLTV--TTNKPRDL-RVKYWLSNDYGERFSISRQ-GDISLM 100
           FS+  Y+VS  EN+ V   +LTV  T N       V Y+ S+D  +RFS+ +  G I L+
Sbjct: 463 FSQPLYNVSLYENITVGTSVLTVLATDNDVGTFGEVNYFFSDD-PDRFSLDKDTGLIMLI 521

Query: 101 QCLDYETEDSYRFTVYATDTL-MTTSATVNISVVNVNDWDPRFRYPQYELFL----PHIP 155
             LDYE    +  TV A D     T+  V I+V++VND  P F+   Y   L    P + 
Sbjct: 522 ARLDYELIQRFTLTVIARDGGGEETTGRVRINVLDVNDNVPTFQKDAYVGALRENEPSV- 580

Query: 156 LADLTPGSVIGKVEAADGDKGDR-------VTLSLRGPYEKMFSINDSGHISI---VDLS 205
                  + + ++ A D D           V  S  G Y  +      G IS+   +D  
Sbjct: 581 -------TQLVRLRATDEDSPPNNLITYSIVNASAFGSYFDISIYEGYGVISVSRPLDYE 633

Query: 206 ALNTSTIQLVVVATDTGNPPRQASVPAIMH 235
            +    I L V+A D GNPP  ++VP  + 
Sbjct: 634 QIPNGLIYLTVMAKDAGNPPLYSTVPVTIE 663



 Score = 45.8 bits (107), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 45/142 (31%), Positives = 68/142 (47%), Gaps = 20/142 (14%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVT-TNKPRDL--RVKYWLSNDYGERFSIS------RQG 95
            FS   Y+V  LEN P  + +L VT T++   L   + Y +     +RF I       R G
Sbjct: 2072 FSPPTYTVHLLENCPPGFSVLQVTATDEDSGLNGELVYRIEAGAQDRFLIHPVTGVIRVG 2131

Query: 96   DISLMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLP 152
            + +    +D E ++SYR TV ATD     ++ +A V I + ++ND  P F  P   + + 
Sbjct: 2132 NAT----IDREEQESYRLTVVATDRGTVPLSGTAIVTILIDDINDSRPEFLNPIQTVSV- 2186

Query: 153  HIPLADLTPGSVIGKVEAADGD 174
               L    PG++I  V A D D
Sbjct: 2187 ---LESAEPGTIIANVTAIDLD 2205



 Score = 45.8 bits (107), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 57/203 (28%), Positives = 87/203 (42%), Gaps = 23/203 (11%)

Query: 43   LQFSKNEYSVSALENLPVNYVLLTVTTNKPRDL-----RVKYWLSNDYGERFSISR-QGD 96
            +QFS   Y    +ENL +   ++ V      +L     R   + S      F I    G 
Sbjct: 1314 VQFSNASYEAVIMENLALGTEIVRVQAYSIDNLNQITYRFDAYTSAQAKALFKIDAITGV 1373

Query: 97   ISLMQCLDYETEDSYRFTVYATDTLMTTSATVN--ISVVNVNDWDPRFRYPQYELFLPHI 154
            I++   +D E  D Y  TV A D      +TV   I+V++ ND  PRF +         +
Sbjct: 1374 ITVKGLVDREKGDFYTLTVVADDGGPKVDSTVKVYITVLDENDNSPRFDFTSDSAI--SV 1431

Query: 155  PLADLTPGSVIGKVEAADGDKGD--RVTLSLR-----GPYEKMFSINDSGHISI---VDL 204
            P  D   G  +  V+A D D G   +V  SL      G +E + S +  G + +   +D 
Sbjct: 1432 P-EDCPVGQRVATVKARDPDAGSNGQVVFSLASGNIAGAFEIITSNDSIGEVFVAKPLDR 1490

Query: 205  SALNTSTIQLVVVATDTGNPPRQ 227
              L+   ++  VVA+D G PPR+
Sbjct: 1491 EELDHYILK--VVASDRGTPPRK 1511



 Score = 43.1 bits (100), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 54/199 (27%), Positives = 89/199 (44%), Gaps = 26/199 (13%)

Query: 44  QFSKNEYSVSALENLPVNYVL--LTVTTNKPRDLRV----KYWLSNDYGERF-----SIS 92
           +F+ +EYSV+  E   V + L       +K  +L +    + +L  +    F     S+ 
Sbjct: 350 EFNSSEYSVAITELAQVGFALPLFIQVVDKDENLGLNSMFEVYLVGNNSHHFIISPTSVQ 409

Query: 93  RQGDISLMQC--LDYETEDSYRFTVYATDTL--MTTSATVNISVVNVNDWDPRFRYPQYE 148
            + DI +     LDYET D Y F ++A +++      A V I+++N ND  P F  P Y 
Sbjct: 410 GKADIRIRVAIPLDYETVDRYDFDLFANESVPDHVGYAKVKITLINENDNRPIFSQPLYN 469

Query: 149 LFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDSGHISIVDLSA 206
           + L      ++T G+ +  V A D D G    V        ++     D+G I ++  + 
Sbjct: 470 VSL----YENITVGTSVLTVLATDNDVGTFGEVNYFFSDDPDRFSLDKDTGLIMLI--AR 523

Query: 207 LNTSTIQ---LVVVATDTG 222
           L+   IQ   L V+A D G
Sbjct: 524 LDYELIQRFTLTVIARDGG 542



 Score = 42.7 bits (99), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 40/137 (29%), Positives = 64/137 (46%), Gaps = 29/137 (21%)

Query: 65   LTVTTNKPRDLRVKYWLS---NDYG---------------ERFSIS-RQGDISLMQCLDY 105
            ++V+ + PR+ RV  WL+   ND G                +FS+  R   +  +  LD 
Sbjct: 1005 VSVSEDVPREFRV-VWLNCTDNDVGLNAELSYFITAGNVDGKFSVGYRDAVVRTVVGLDR 1063

Query: 106  ETEDSYRFTVYATDT-----LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLT 160
            ET  +Y   + A D        T +ATV ++V++VND  P F    YE  +P     D+ 
Sbjct: 1064 ETTAAYTLVLEAIDNGPVGKRRTGTATVFVTVLDVNDNRPIFLQSSYEASVPE----DIP 1119

Query: 161  PGSVIGKVEAADGDKGD 177
             G  I +++A D D+G+
Sbjct: 1120 EGHSIVQLKATDADEGE 1136



 Score = 41.6 bits (96), Expect = 0.66,   Method: Compositional matrix adjust.
 Identities = 39/124 (31%), Positives = 62/124 (50%), Gaps = 15/124 (12%)

Query: 92   SRQGDISLMQCLDYETEDSYRFTVYATDTLMTTSAT---VNISVVNVNDWDPRFRYPQYE 148
            S  G +   + +DYE      FTV A+D      A    V + +V++ND +P F  P Y+
Sbjct: 2352 SSAGKVIANRTVDYEEVHWLNFTVRASDNGSPPRAAEIPVYLEIVDINDNNPIFDQPSYQ 2411

Query: 149  LFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-DSGHISIVDL 204
              +      D+  G+VI +V A D D G+   +    + G  E  F+IN ++G IS+  L
Sbjct: 2412 EAV----FEDIAVGTVILRVTATDADSGNFALIEYSLVDG--EGKFAINPNTGDISV--L 2463

Query: 205  SALN 208
            S+L+
Sbjct: 2464 SSLD 2467



 Score = 40.4 bits (93), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 41/140 (29%), Positives = 64/140 (45%), Gaps = 10/140 (7%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDY---GERFSI-SRQGDISLM 100
           F    YSV   +N PV   +  V    P DL     +   +      F+I S +G ++++
Sbjct: 132 FHNQPYSVRITQNTPVGTPIFIVNATDP-DLGAGGSVLYSFQPPSPFFAIDSARGIVTVI 190

Query: 101 QCLDYETEDSYRFTVYATDT----LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
           Q LDYE   +Y+ TV ATD      ++T A + I + ++ D DP F    Y   +     
Sbjct: 191 QELDYEVTQAYQLTVNATDQDKTRPLSTLANLAIIITDMQDMDPIFINLPYSTNIYEQLT 250

Query: 157 ADLTPGSVIGKVEAADGDKG 176
            + T G+ +  + A D DKG
Sbjct: 251 VNAT-GTTVRVITAVDQDKG 269



 Score = 38.9 bits (89), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 66/232 (28%), Positives = 99/232 (42%), Gaps = 25/232 (10%)

Query: 12   TLVVRAIQYDN----QDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTV 67
            TLV+ AI  DN    + R   AT+ V+    +     F ++ Y  S  E++P  + ++ +
Sbjct: 1070 TLVLEAI--DNGPVGKRRTGTATVFVTVLDVNDNRPIFLQSSYEASVPEDIPEGHSIVQL 1127

Query: 68   -TTNKPRDLRVKYW---LSNDYGERFSISRQGDISLMQC---LDYETEDSYRFTVYATD- 119
              T+       + W   L  ++G  F I   G   LM+    LD E   S+   V A + 
Sbjct: 1128 KATDADEGEFGRVWYRILHGNHGNNFRI-HVGSGLLMRGPRPLDRERNSSHVLMVEAYNH 1186

Query: 120  --TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTP-GSVIGKVEAADGDKG 176
                M +S  V + V +VND  P F   QY      + L +    G+ +  V A D D G
Sbjct: 1187 DLGPMRSSVRVIVYVEDVNDEAPVFTQQQYN----RLGLRETAGIGTSVIVVRATDKDTG 1242

Query: 177  DRVTLSLR--GPYEKMFSINDS-GHISIVDLSALNTSTIQLVVVATDTGNPP 225
            D   ++ R     E  F I++S G I  VD     T T  L+ V+   G PP
Sbjct: 1243 DGGLVNYRILSGAEGKFEIDESTGLIVTVDYLDYETKTSYLMNVSATDGAPP 1294



 Score = 38.1 bits (87), Expect = 7.0,   Method: Compositional matrix adjust.
 Identities = 61/285 (21%), Positives = 118/285 (41%), Gaps = 59/285 (20%)

Query: 4    EDDFL-QPITLVVRA----IQYDNQDRYALATLIVSK-----AGTSL-----RELQFSKN 48
            +D FL  P+T V+R     I  + Q+ Y L  +   +     +GT++      ++  S+ 
Sbjct: 2116 QDRFLIHPVTGVIRVGNATIDREEQESYRLTVVATDRGTVPLSGTAIVTILIDDINDSRP 2175

Query: 49   EY-----SVSALENLPVNYVLLTVTT-----NKPRDLRVKYWLSNDYGER--------FS 90
            E+     +VS LE+     ++  VT      N   +  +   ++ D  +R        F+
Sbjct: 2176 EFLNPIQTVSVLESAEPGTIIANVTAIDLDLNPKLEYHIISIVAKDDTDRLVPDQEDAFA 2235

Query: 91   IS-RQGDISLMQCLDYETEDSYRFTVYATD--------TLMTTSATVNISVVNVNDWDPR 141
            ++   G + +   L+ E   +Y  T+   D        ++   +A + +++++VND  P+
Sbjct: 2236 VNINTGSVMVKSPLNRELVATYEVTLSVIDNASDLPEHSVSVPNAKLTVNILDVNDNTPQ 2295

Query: 142  FRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSGHISI 201
            F+ P    +     L   TPG+ +  V A D DKG    ++       +  +   G++ +
Sbjct: 2296 FK-PFGITYYTERVLEGATPGTTLIAVAAVDPDKGLNGLITY-----TLLDLTPPGYVQL 2349

Query: 202  VDLSA-----------LNTSTIQLVVVATDTGNPPRQASVPAIMH 235
             D SA                +   V A+D G+PPR A +P  + 
Sbjct: 2350 EDSSAGKVIANRTVDYEEVHWLNFTVRASDNGSPPRAAEIPVYLE 2394


>gi|209489409|gb|ACI49172.1| hypothetical protein Csp3_JD01.004 [Caenorhabditis angaria]
          Length = 4291

 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 57/184 (30%), Positives = 88/184 (47%), Gaps = 15/184 (8%)

Query: 56   ENLPV---NYVLLTVTTNKPRDLR----VKYWLSNDYGERFSIS-RQGDISLMQCLDYET 107
            ENL     + +LLT    K  DL     ++Y L N + ERF I  + G + +++ LD E 
Sbjct: 2984 ENLAASLEDRILLTRIIAKDLDLDSSSILEYRLKNSFDERFLIEPKSGVLMVVKMLDREE 3043

Query: 108  EDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGK 167
               YR  +  +D     SA VN+ V + ND  P F    Y + +    +   + G  + K
Sbjct: 3044 IGEYRLDIVVSDGKFEDSAIVNVIVADQNDNPPIFERKVYSMKV----MESESIGYELVK 3099

Query: 168  VEAADGDKGDRVTLSLR-GPYEKMFSIN-DSGHISIVD-LSALNTSTIQLVVVATDTGNP 224
            V A  GD G+ VT SL+     KM  ++ +SG + + + L       I++ + A D+GNP
Sbjct: 3100 VRADGGDSGESVTYSLKPSKMNKMVKLDPNSGILKLAEGLDFEKLQKIEIFIEAKDSGNP 3159

Query: 225  PRQA 228
            P  A
Sbjct: 3160 PLTA 3163



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 65/239 (27%), Positives = 111/239 (46%), Gaps = 17/239 (7%)

Query: 2    INEDDFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVN 61
            I EDD ++   L V ++       YA   + V K+GT     +F +++Y  SALEN PVN
Sbjct: 2320 IEEDDVMEKKNLNV-SVTDGIFTSYAQLLVDVKKSGTRQLPPRFEQSQYVASALENTPVN 2378

Query: 62   YVLLTVTTNKPRDLRVKYWL---SNDYGERFSISRQ-----GDISLMQCLDYETEDSYRF 113
              +L     +     + Y L   S+  G + +   +     G I + + L+Y  +  Y+ 
Sbjct: 2379 KSVLIRVNARDGITPIHYSLGPASSSGGSKGAWPVRIDKITGRIHVSRVLNYHNDKIYQI 2438

Query: 114  TVYATDTLMTTS-ATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAAD 172
             + A D +   + AT+ +SV+++ND  P F    Y   +  +       G  +  V A D
Sbjct: 2439 PLVAEDAVGRRAFATLTLSVIDINDKPPVFVLSSYSCSMSALA----KEGDTVLMVSATD 2494

Query: 173  GDKGDRVTLSLRGPYEKMFSIN-DSGHISIV-DLSALNTSTIQLVVVATDTGNPPRQAS 229
             D+GD +  SL      +FS++   G +++   L     ++  L+V ATD+ NPP  A+
Sbjct: 2495 DDEGDSIEYSLLDD-SSVFSVHPKQGTVTVAKKLEDKVGNSFSLIVKATDSANPPHHAT 2552



 Score = 40.4 bits (93), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 31/113 (27%), Positives = 55/113 (48%), Gaps = 10/113 (8%)

Query: 95   GDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHI 154
            G++ +M+ LD+ET    R  V          AT+ ++V++ ND  P+F       F+   
Sbjct: 1390 GNVIIMEPLDFETSRQIRAIVQVRQANFKNFATLIVNVIDENDNAPKFSQSNQIAFVDES 1449

Query: 155  -PLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIND-SGHISIV 202
             P+     GS++ KV A D D G+   L+   + G  +K+F ++  SG + + 
Sbjct: 1450 DPV-----GSLVAKVTAFDADNGENGMLTYTIISGNEQKLFELDKLSGEVRLA 1497


>gi|12330560|gb|AAG52817.1|AF308939_1 cadherin-related 23 protein [Mus musculus]
          Length = 3354

 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 60/195 (30%), Positives = 92/195 (47%), Gaps = 20/195 (10%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWLSNDYGERFSIS-RQGDISLM 100
            F +  Y  +  E++ V  V+L VT           ++Y L +  G +F+I+   GDIS++
Sbjct: 2402 FDQPSYQEAVFEDIAVGTVILRVTATDADSGNFALIEYSLVDGEG-KFAINPNTGDISVL 2460

Query: 101  QCLDYETEDSYRFTVYATDT-------LMTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
              LD E +D Y  T  A D            S  V I V++VND  P+F  PQ+   +  
Sbjct: 2461 SSLDREKKDHYILTALAKDNPGDVASNRRENSVQVVIRVLDVNDCRPQFSKPQFSTSV-- 2518

Query: 154  IPLADLTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSIN-DSGHISIVDLSALNTS 210
                +   G+ +  + A D D+G   ++T SL GP  + FS++ DSG ++       +  
Sbjct: 2519 --YENEPAGTSVITMLATDQDEGSNSQLTYSLEGPGMEAFSVDMDSGLVT-TQRPLQSYE 2575

Query: 211  TIQLVVVATDTGNPP 225
               L VVATD G PP
Sbjct: 2576 RFNLTVVATDGGEPP 2590



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 67/217 (30%), Positives = 98/217 (45%), Gaps = 42/217 (19%)

Query: 45  FSKNEYSVSALENLPVNY-VLLTVTTNKPRDLRVKYWLSNDYGE-----------RFSI- 91
           FSK  Y VS LEN+     VL    T+  R        S +YG+           +F I 
Sbjct: 671 FSKPAYFVSVLENIMAGATVLFLNATDLDR--------SREYGQESIIYSLEGSSQFRIN 722

Query: 92  SRQGDISLMQCLDYETEDSYRFTVYATD-----TLMTTSATVNISVVNVNDWDPRFRYPQ 146
           +R G+I+    LD ET+  Y   V A D        T  ATVN++++++ND  P ++   
Sbjct: 723 ARSGEITTTSLLDRETKSEYILIVRAVDGGVGHNQKTGIATVNVTLLDINDNHPTWKDAP 782

Query: 147 YELFLPHIPLADLT-PGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSIND-SGHISI-- 201
           Y     +I L ++T P S +  V A D D G+  TL     P  K +S+N  +G I    
Sbjct: 783 Y-----YINLVEMTPPDSDVTTVVAVDPDLGENGTLVYSIHPPNKFYSLNSTTGKIRTTH 837

Query: 202 VDLSALNTSTIQ------LVVVATDTGNPPRQASVPA 232
           V L   N   ++      ++V  TD G PP +A+  A
Sbjct: 838 VMLDRENPDPVEAELMRKIIVSVTDCGRPPLKATSSA 874



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 65/210 (30%), Positives = 94/210 (44%), Gaps = 28/210 (13%)

Query: 45  FSKNEYSVSALENLPVNYVLLTV--TTNKPRDL-RVKYWLSNDYGERFSISRQ-GDISLM 100
           FS+  Y+VS  EN+ V   +LTV  T N       V Y+ S+D  +RFS+ +  G I L+
Sbjct: 460 FSQPLYNVSLYENITVGTSVLTVLATDNDVGTFGEVNYFFSDD-PDRFSLDKDTGLIMLI 518

Query: 101 QCLDYETEDSYRFTVYATDTL-MTTSATVNISVVNVNDWDPRFRYPQYELFL----PHIP 155
             LDYE    +  TV A D     T+  V I+V++VND  P F+   Y   L    P + 
Sbjct: 519 ARLDYELIQRFTLTVIARDGGGEETTGRVRINVLDVNDNVPTFQKDAYVGALRENEPSV- 577

Query: 156 LADLTPGSVIGKVEAADGDKGDR-------VTLSLRGPYEKMFSINDSGHISI---VDLS 205
                  + + ++ A D D           V  S  G Y  +      G IS+   +D  
Sbjct: 578 -------TQLVRLRATDEDSPPNNLITYSIVNASAFGSYFDISIYEGYGVISVSRPLDYE 630

Query: 206 ALNTSTIQLVVVATDTGNPPRQASVPAIMH 235
            +    I L V+A D GNPP  ++VP  + 
Sbjct: 631 QIPNGLIYLTVMAKDAGNPPLYSTVPVTIE 660



 Score = 45.8 bits (107), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 45/142 (31%), Positives = 68/142 (47%), Gaps = 20/142 (14%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVT-TNKPRDL--RVKYWLSNDYGERFSIS------RQG 95
            FS   Y+V  LEN P  + +L VT T++   L   + Y +     +RF I       R G
Sbjct: 2069 FSPPTYTVHLLENCPPGFSVLQVTATDEDSGLNGELVYRIEAGAQDRFLIHPVTGVIRVG 2128

Query: 96   DISLMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLP 152
            + +    +D E ++SYR TV ATD     ++ +A V I + ++ND  P F  P   + + 
Sbjct: 2129 NAT----IDREEQESYRLTVVATDRGTVPLSGTAIVTILIDDINDSRPEFLNPIQTVSV- 2183

Query: 153  HIPLADLTPGSVIGKVEAADGD 174
               L    PG++I  V A D D
Sbjct: 2184 ---LESAEPGTIIANVTAIDLD 2202



 Score = 45.8 bits (107), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 57/204 (27%), Positives = 88/204 (43%), Gaps = 25/204 (12%)

Query: 43   LQFSKNEYSVSALENLPVNYVLLTVTTNKPRDL-----RVKYWLSNDYGERFSISR-QGD 96
            +QFS   Y    +ENL +   ++ V      +L     R   + S      F I    G 
Sbjct: 1311 VQFSNASYEAVIMENLALGTEIVRVQAYSIDNLNQITYRFDAYTSAQAKALFKIDAITGV 1370

Query: 97   ISLMQCLDYETEDSYRFTVYATDTLMTTSATVN--ISVVNVNDWDPRFRY-PQYELFLPH 153
            I++   +D E  D Y  TV A D      +TV   I+V++ ND  PRF +     + +P 
Sbjct: 1371 ITVKGLVDREKGDFYTLTVVADDGGPKVDSTVKVYITVLDENDNSPRFDFTSDSAISVPE 1430

Query: 154  IPLADLTPGSVIGKVEAADGDKGD--RVTLSLR-----GPYEKMFSINDSGHISI---VD 203
                D   G  +  V+A D D G   +V  SL      G +E + S +  G + +   +D
Sbjct: 1431 ----DCPVGQRVATVKARDPDAGSNGQVVFSLASGNIAGAFEIITSNDSIGEVFVAKPLD 1486

Query: 204  LSALNTSTIQLVVVATDTGNPPRQ 227
               L+   ++  VVA+D G PPR+
Sbjct: 1487 REELDHYILK--VVASDRGTPPRK 1508



 Score = 43.1 bits (100), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 54/199 (27%), Positives = 89/199 (44%), Gaps = 26/199 (13%)

Query: 44  QFSKNEYSVSALENLPVNYVL--LTVTTNKPRDLRV----KYWLSNDYGERF-----SIS 92
           +F+ +EYSV+  E   V + L       +K  +L +    + +L  +    F     S+ 
Sbjct: 347 EFNSSEYSVAITELAQVGFALPLFIQVVDKDENLGLNSMFEVYLVGNNSHHFIISPTSVQ 406

Query: 93  RQGDISLMQC--LDYETEDSYRFTVYATDTL--MTTSATVNISVVNVNDWDPRFRYPQYE 148
            + DI +     LDYET D Y F ++A +++      A V I+++N ND  P F  P Y 
Sbjct: 407 GKADIRIRVAIPLDYETVDRYDFDLFANESVPDHVGYAKVKITLINENDNRPIFSQPLYN 466

Query: 149 LFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDSGHISIVDLSA 206
           + L      ++T G+ +  V A D D G    V        ++     D+G I ++  + 
Sbjct: 467 VSL----YENITVGTSVLTVLATDNDVGTFGEVNYFFSDDPDRFSLDKDTGLIMLI--AR 520

Query: 207 LNTSTIQ---LVVVATDTG 222
           L+   IQ   L V+A D G
Sbjct: 521 LDYELIQRFTLTVIARDGG 539



 Score = 42.7 bits (99), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 40/137 (29%), Positives = 64/137 (46%), Gaps = 29/137 (21%)

Query: 65   LTVTTNKPRDLRVKYWLS---NDYG---------------ERFSIS-RQGDISLMQCLDY 105
            ++V+ + PR+ RV  WL+   ND G                +FS+  R   +  +  LD 
Sbjct: 1002 VSVSEDVPREFRV-VWLNCTDNDVGLNAELSYFITAGNVDGKFSVGYRDAVVRTVVGLDR 1060

Query: 106  ETEDSYRFTVYATDT-----LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLT 160
            ET  +Y   + A D        T +ATV ++V++VND  P F    YE  +P     D+ 
Sbjct: 1061 ETTAAYTLVLEAIDNGPVGKRRTGTATVFVTVLDVNDNRPIFLQSSYEASVPE----DIP 1116

Query: 161  PGSVIGKVEAADGDKGD 177
             G  I +++A D D+G+
Sbjct: 1117 EGHSIVQLKATDADEGE 1133



 Score = 41.6 bits (96), Expect = 0.68,   Method: Compositional matrix adjust.
 Identities = 39/124 (31%), Positives = 62/124 (50%), Gaps = 15/124 (12%)

Query: 92   SRQGDISLMQCLDYETEDSYRFTVYATDTLMTTSAT---VNISVVNVNDWDPRFRYPQYE 148
            S  G +   + +DYE      FTV A+D      A    V + +V++ND +P F  P Y+
Sbjct: 2349 SSAGKVIANRTVDYEEVHWLNFTVRASDNGSPPRAAEIPVYLEIVDINDNNPIFDQPSYQ 2408

Query: 149  LFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-DSGHISIVDL 204
              +      D+  G+VI +V A D D G+   +    + G  E  F+IN ++G IS+  L
Sbjct: 2409 EAV----FEDIAVGTVILRVTATDADSGNFALIEYSLVDG--EGKFAINPNTGDISV--L 2460

Query: 205  SALN 208
            S+L+
Sbjct: 2461 SSLD 2464



 Score = 38.9 bits (89), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 66/232 (28%), Positives = 99/232 (42%), Gaps = 25/232 (10%)

Query: 12   TLVVRAIQYDN----QDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTV 67
            TLV+ AI  DN    + R   AT+ V+    +     F ++ Y  S  E++P  + ++ +
Sbjct: 1067 TLVLEAI--DNGPVGKRRTGTATVFVTVLDVNDNRPIFLQSSYEASVPEDIPEGHSIVQL 1124

Query: 68   -TTNKPRDLRVKYW---LSNDYGERFSISRQGDISLMQC---LDYETEDSYRFTVYATD- 119
              T+       + W   L  ++G  F I   G   LM+    LD E   S+   V A + 
Sbjct: 1125 KATDADEGEFGRVWYRILHGNHGNNFRI-HVGSGLLMRGPRPLDRERNSSHVLMVEAYNH 1183

Query: 120  --TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTP-GSVIGKVEAADGDKG 176
                M +S  V + V +VND  P F   QY      + L +    G+ +  V A D D G
Sbjct: 1184 DLGPMRSSVRVIVYVEDVNDEAPVFTQQQYN----RLGLRETAGIGTSVIVVRATDKDTG 1239

Query: 177  DRVTLSLR--GPYEKMFSINDS-GHISIVDLSALNTSTIQLVVVATDTGNPP 225
            D   ++ R     E  F I++S G I  VD     T T  L+ V+   G PP
Sbjct: 1240 DGGLVNYRILSGAEGKFEIDESTGLIVTVDYLDYETKTSYLMNVSATDGAPP 1291



 Score = 38.1 bits (87), Expect = 6.9,   Method: Compositional matrix adjust.
 Identities = 62/217 (28%), Positives = 91/217 (41%), Gaps = 30/217 (13%)

Query: 25  RYALAT--------LIVSKAGTSLRELQFSKNEYSVSAL---ENLPVNYVLLTVTTNKPR 73
           RY+L T        ++V  +   +  L F  N +  + L   E+ PV     +VT    R
Sbjct: 2   RYSLVTCYAVLWLLMLVPGSWGQVNRLPFFTNHFFDTYLLISEDTPVGS---SVTQLLAR 58

Query: 74  DLR---VKYWLSNDYGERFSISR--QGDISLMQCLDYETEDSYRFTVYATDTLMTTSATV 128
           D+    + + +S +   RF       G + L Q LD ET+  +      +D     +  V
Sbjct: 59  DMDNDPLVFGVSGEEASRFFAVEPDTGVVWLRQPLDRETKSEFTVEFSVSDHQGVITRKV 118

Query: 129 NISVVNVNDWDPRFRYPQYELFLPHIPLADLTP-GSVIGKVEAADGD--KGDRVTLSLRG 185
           NI V +VND  P F    Y + +P     + TP G+ I  V A D D   G  V  S + 
Sbjct: 119 NIQVGDVNDNAPTFHNQPYSVRIP-----ENTPVGTPIFIVNATDPDLGAGGSVLYSFQP 173

Query: 186 PYEKMFSINDSGHISIV--DLSALNTSTIQLVVVATD 220
           P    F+I+ +  I  V  +L    T   QL V ATD
Sbjct: 174 P-SPFFAIDSARGIVTVIQELDYEVTQAYQLTVNATD 209



 Score = 38.1 bits (87), Expect = 7.4,   Method: Compositional matrix adjust.
 Identities = 61/285 (21%), Positives = 118/285 (41%), Gaps = 59/285 (20%)

Query: 4    EDDFL-QPITLVVRA----IQYDNQDRYALATLIVSK-----AGTSL-----RELQFSKN 48
            +D FL  P+T V+R     I  + Q+ Y L  +   +     +GT++      ++  S+ 
Sbjct: 2113 QDRFLIHPVTGVIRVGNATIDREEQESYRLTVVATDRGTVPLSGTAIVTILIDDINDSRP 2172

Query: 49   EY-----SVSALENLPVNYVLLTVTT-----NKPRDLRVKYWLSNDYGER--------FS 90
            E+     +VS LE+     ++  VT      N   +  +   ++ D  +R        F+
Sbjct: 2173 EFLNPIQTVSVLESAEPGTIIANVTAIDLDLNPKLEYHIISIVAKDDTDRLVPDQEDAFA 2232

Query: 91   IS-RQGDISLMQCLDYETEDSYRFTVYATD--------TLMTTSATVNISVVNVNDWDPR 141
            ++   G + +   L+ E   +Y  T+   D        ++   +A + +++++VND  P+
Sbjct: 2233 VNINTGSVMVKSPLNRELVATYEVTLSVIDNASDLPEHSVSVPNAKLTVNILDVNDNTPQ 2292

Query: 142  FRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSGHISI 201
            F+ P    +     L   TPG+ +  V A D DKG    ++       +  +   G++ +
Sbjct: 2293 FK-PFGITYYTERVLEGATPGTTLIAVAAVDPDKGLNGLITY-----TLLDLTPPGYVQL 2346

Query: 202  VDLSA-----------LNTSTIQLVVVATDTGNPPRQASVPAIMH 235
             D SA                +   V A+D G+PPR A +P  + 
Sbjct: 2347 EDSSAGKVIANRTVDYEEVHWLNFTVRASDNGSPPRAAEIPVYLE 2391


>gi|292620525|ref|XP_001921777.2| PREDICTED: protocadherin gamma-A4-like [Danio rerio]
          Length = 796

 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 59/199 (29%), Positives = 95/199 (47%), Gaps = 23/199 (11%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKP---RDLRVKYWLSNDYGER----FSISR-QGD 96
           F+K+ YSV   EN PV   +L V    P   ++  V Y L ++   +    F ++   GD
Sbjct: 244 FTKDTYSVILNENTPVGTTILRVNATDPDEGQNGEVVYSLGHNVNYKLRKLFDVNPVTGD 303

Query: 97  ISLMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
           + +   LDYE +D Y+  + A+D     + T   + I + +VND +P+         +P 
Sbjct: 304 VIVTGLLDYEVKDKYQIDIQASDKGTVPLKTDKIITIKIADVNDNEPQIEVTSLSSTIPE 363

Query: 154 IPLADLTPGSVIGKVEAADGDKG--DRVTLSLRG--PYEKMFSINDSGHISIVDLSALNT 209
               D  PG+ +  +  +D D G   RVT SL    P++ M S  ++ + S+V  SAL+ 
Sbjct: 364 ----DSKPGTTVALISVSDLDSGINGRVTCSLSENIPFQLMPSSQENTY-SLVTTSALDR 418

Query: 210 STI---QLVVVATDTGNPP 225
            TI    + + A D G PP
Sbjct: 419 ETIAHYDITLEAKDAGQPP 437



 Score = 48.1 bits (113), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 59/263 (22%), Positives = 119/263 (45%), Gaps = 31/263 (11%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVT-----TNKPRDLRVKYWLSNDYGERFSI-----SR 93
           +FS + Y+   +EN      L +V+     T +   +  + W       +F+      S 
Sbjct: 457 EFSSSPYAFYVMENNAPGKSLFSVSASDKDTGENSAVSYQIWRDGGAENKFTSFININSE 516

Query: 94  QGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYP----Q 146
            G+I  ++  D+ET  +++F + ATD+    ++++ TVN+ +++ ND  P   YP     
Sbjct: 517 NGEIYALKSFDFETSKTFQFHILATDSGSPSLSSNVTVNVFILDQNDNVPVILYPVSANG 576

Query: 147 YELFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYE-KMFSIND-SGHI-SI 201
               +  IP  ++  G ++ KV A D D G    +  SL+   E  +F+++  +G I ++
Sbjct: 577 SAEGVEEIP-RNVNAGHLVTKVRAYDADIGYNGWLLFSLQEVSEHSLFALDRYTGQIRTL 635

Query: 202 VDLSALNTSTIQLVVVATDTGNPPRQASVPAIMHFPEA--------IVQQASSKLNSGTS 253
              +  + +  +LV++  D GN    A+   I+   E         +      +  +  +
Sbjct: 636 RSFTETDEAQHKLVILVKDNGNVSLSATATVIVKVVEPKEAFAGFDVKNTVKDEEENNVT 695

Query: 254 STVLIILGVVLIVLGFVIILLIL 276
             ++I LG V ++    II+LI+
Sbjct: 696 FYLIITLGSVSVLFVISIIVLIV 718



 Score = 42.7 bits (99), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 40/142 (28%), Positives = 67/142 (47%), Gaps = 17/142 (11%)

Query: 102 CLDYETEDSYRFTVYATDTL---MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLAD 158
            LD ET   Y  T+ A D     +++  +V + + +VND  P F    Y  ++    + +
Sbjct: 415 ALDRETIAHYDITLEAKDAGQPPLSSVKSVTVQISDVNDNSPEFSSSPYAFYV----MEN 470

Query: 159 LTPGSVIGKVEAADGDKGDRVTLSLR----GPYEKMFS--IN---DSGHISIVDLSALNT 209
             PG  +  V A+D D G+   +S +    G  E  F+  IN   ++G I  +      T
Sbjct: 471 NAPGKSLFSVSASDKDTGENSAVSYQIWRDGGAENKFTSFININSENGEIYALKSFDFET 530

Query: 210 S-TIQLVVVATDTGNPPRQASV 230
           S T Q  ++ATD+G+P   ++V
Sbjct: 531 SKTFQFHILATDSGSPSLSSNV 552


>gi|218505727|ref|NP_001136211.1| protocadherin-15 isoform CD1-9 precursor [Mus musculus]
          Length = 1916

 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 61/195 (31%), Positives = 99/195 (50%), Gaps = 14/195 (7%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGER-FSISRQ-GDISLMQ 101
           +F +  YS+   E + +  +LL +         + Y + N   +R F++S   G +SL +
Sbjct: 593 RFPQLMYSLEVSEAMRIGAILLNLQATDREGDPITYAIENGDPQRVFNLSETTGILSLGK 652

Query: 102 CLDYETEDSYRFTVYATDTL--MTTSATVNISVVNVNDWDPRFRYPQYELFLP-HIPLAD 158
            LD E+ D Y   V A+D     T++ATVNI V +VND  P F     + +LP ++ + +
Sbjct: 653 ALDRESTDRYILIVTASDGRPDGTSTATVNIVVTDVNDNAPVF-----DPYLPRNLSVVE 707

Query: 159 LTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDSGHI-SIVDLSALNTSTIQLV 215
               + +G+V A D D G   +V  SL G +  +F I  +G I + V L+       +LV
Sbjct: 708 EEANAFVGQVRATDPDAGINGQVHYSL-GNFNNLFRITSNGSIYTAVKLNREARDHYELV 766

Query: 216 VVATDTGNPPRQASV 230
           VVATD    PR +++
Sbjct: 767 VVATDGAVHPRHSTL 781



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 65/245 (26%), Positives = 110/245 (44%), Gaps = 35/245 (14%)

Query: 6   DFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVL- 64
           DF Q   LV++A Q +     A A+L +     + +   F+   Y    LE+ PV   + 
Sbjct: 334 DFHQKFDLVIKAEQDNGHPLPAFASLHIEILDENNQSPYFTMPSYQGYILESAPVGATIS 393

Query: 65  --LTVTT-----------NKPRDLRVKYWLSNDYGERFSISRQG---DISLMQCLDYETE 108
             L +TT              +D  +  +L NDY   F+++  G    ++L+Q +D E +
Sbjct: 394 ESLNLTTPLRIVALDKDIEDTKDPELHLFL-NDYTSVFTVTPTGITRYLTLLQPVDREEQ 452

Query: 109 DSYRFTVYATDTLMTTS-ATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGK 167
            +Y F + A D +  +    VNI V++ ND  P F    Y++++      D++PG  + +
Sbjct: 453 QTYTFLITAFDGVQESEPVVVNIRVMDANDNTPTFPEISYDVYV----YTDMSPGDSVIQ 508

Query: 168 VEAADGDKGDRVTLSLRGPYEKM------FSIND-SGHISIV-DLSALNTSTIQLVVVAT 219
           + A D D+G    +S    YE +      F IN  +G +SI   +  +   T  L V A+
Sbjct: 509 LTAVDADEGSNGEIS----YEILVGGKGDFVINKTTGLVSIAPGVELIVGQTYALTVQAS 564

Query: 220 DTGNP 224
           D   P
Sbjct: 565 DNAPP 569



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 71/233 (30%), Positives = 104/233 (44%), Gaps = 26/233 (11%)

Query: 13  LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKP 72
           LVV A       R++  TL +           F+ + Y+V   ENLP     L +   K 
Sbjct: 765 LVVVATDGAVHPRHSTLTLYIKVLDIDDNSPVFTNSTYTVVVEENLPAGTSFLQIEA-KD 823

Query: 73  RDL--RVKYWL-SNDYGERFSISR-QGDISLMQCLDYET----EDSYRFTVYATD---TL 121
            DL   V Y + S +    F++    G++SL++ LDYE     E S  F V A D   T+
Sbjct: 824 VDLGANVSYRIRSPEVKHLFALHPFTGELSLLRSLDYEAFPDQEASITFLVEAFDIYGTM 883

Query: 122 MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDK----GD 177
               ATV + V ++ND+ P F    Y+  +      D   G+ I  V A D D       
Sbjct: 884 PPGIATVTVIVKDMNDYPPVFSKRIYKGMV----APDAVKGTPITTVYAEDADPPGMPAS 939

Query: 178 RVTL---SLRGPY-EKMFSIN-DSGHI-SIVDLSALNTSTIQLVVVATDTGNP 224
           RV      ++ PY   +F +  DSG + + V+L+   T+  +LVVVA D G P
Sbjct: 940 RVRYRVDDVQFPYPASIFDVEEDSGRVVTRVNLNEEPTTIFKLVVVAFDDGEP 992


>gi|124517680|ref|NP_075859.2| cadherin-23 isoform 1 precursor [Mus musculus]
 gi|148700222|gb|EDL32169.1| cadherin 23 (otocadherin), isoform CRA_c [Mus musculus]
          Length = 3354

 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 60/195 (30%), Positives = 92/195 (47%), Gaps = 20/195 (10%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWLSNDYGERFSIS-RQGDISLM 100
            F +  Y  +  E++ V  V+L VT           ++Y L +  G +F+I+   GDIS++
Sbjct: 2402 FDQPSYQEAVFEDIAVGTVILRVTATDADSGNFALIEYSLVDGEG-KFAINPNTGDISVL 2460

Query: 101  QCLDYETEDSYRFTVYATDT-------LMTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
              LD E +D Y  T  A D            S  V I V++VND  P+F  PQ+   +  
Sbjct: 2461 SSLDREKKDHYILTALAKDNPGDVASNRRENSVQVVIRVLDVNDCRPQFSKPQFSTSV-- 2518

Query: 154  IPLADLTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSIN-DSGHISIVDLSALNTS 210
                +   G+ +  + A D D+G   ++T SL GP  + FS++ DSG ++       +  
Sbjct: 2519 --YENEPAGTSVITMLATDQDEGSNSQLTYSLEGPGMEAFSVDMDSGLVT-TQRPLQSYE 2575

Query: 211  TIQLVVVATDTGNPP 225
               L VVATD G PP
Sbjct: 2576 RFNLTVVATDGGEPP 2590



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 67/217 (30%), Positives = 98/217 (45%), Gaps = 42/217 (19%)

Query: 45  FSKNEYSVSALENLPVNY-VLLTVTTNKPRDLRVKYWLSNDYGE-----------RFSI- 91
           FSK  Y VS LEN+     VL    T+  R        S +YG+           +F I 
Sbjct: 671 FSKPAYFVSVLENIMAGATVLFLNATDLDR--------SREYGQESIIYSLEGSSQFRIN 722

Query: 92  SRQGDISLMQCLDYETEDSYRFTVYATD-----TLMTTSATVNISVVNVNDWDPRFRYPQ 146
           +R G+I+    LD ET+  Y   V A D        T  ATVN++++++ND  P ++   
Sbjct: 723 ARSGEITTTSLLDRETKSEYILIVRAVDGGVGHNQKTGIATVNVTLLDINDNHPTWKDAP 782

Query: 147 YELFLPHIPLADLT-PGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSIND-SGHISI-- 201
           Y     +I L ++T P S +  V A D D G+  TL     P  K +S+N  +G I    
Sbjct: 783 Y-----YINLVEMTPPDSDVTTVVAVDPDLGENGTLVYSIHPPNKFYSLNSTTGKIRTTH 837

Query: 202 VDLSALNTSTIQ------LVVVATDTGNPPRQASVPA 232
           V L   N   ++      ++V  TD G PP +A+  A
Sbjct: 838 VMLDRENPDPVEAELMRKIIVSVTDCGRPPLKATSSA 874



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 65/210 (30%), Positives = 94/210 (44%), Gaps = 28/210 (13%)

Query: 45  FSKNEYSVSALENLPVNYVLLTV--TTNKPRDL-RVKYWLSNDYGERFSISRQ-GDISLM 100
           FS+  Y+VS  EN+ V   +LTV  T N       V Y+ S+D  +RFS+ +  G I L+
Sbjct: 460 FSQPLYNVSLYENITVGTSVLTVLATDNDVGTFGEVNYFFSDD-PDRFSLDKDTGLIMLI 518

Query: 101 QCLDYETEDSYRFTVYATDTL-MTTSATVNISVVNVNDWDPRFRYPQYELFL----PHIP 155
             LDYE    +  TV A D     T+  V I+V++VND  P F+   Y   L    P + 
Sbjct: 519 ARLDYELIQRFTLTVIARDGGGEETTGRVRINVLDVNDNVPTFQKDAYVGALRENEPSV- 577

Query: 156 LADLTPGSVIGKVEAADGDKGDR-------VTLSLRGPYEKMFSINDSGHISI---VDLS 205
                  + + ++ A D D           V  S  G Y  +      G IS+   +D  
Sbjct: 578 -------TQLVRLRATDEDSPPNNLITYSIVNASAFGSYFDISIYEGYGVISVSRPLDYE 630

Query: 206 ALNTSTIQLVVVATDTGNPPRQASVPAIMH 235
            +    I L V+A D GNPP  ++VP  + 
Sbjct: 631 QIPNGLIYLTVMAKDAGNPPLYSTVPVTIE 660



 Score = 45.8 bits (107), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 45/142 (31%), Positives = 68/142 (47%), Gaps = 20/142 (14%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVT-TNKPRDL--RVKYWLSNDYGERFSIS------RQG 95
            FS   Y+V  LEN P  + +L VT T++   L   + Y +     +RF I       R G
Sbjct: 2069 FSPPTYTVHLLENCPPGFSVLQVTATDEDSGLNGELVYRIEAGAQDRFLIHPVTGVIRVG 2128

Query: 96   DISLMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLP 152
            + +    +D E ++SYR TV ATD     ++ +A V I + ++ND  P F  P   + + 
Sbjct: 2129 NAT----IDREEQESYRLTVVATDRGTVPLSGTAIVTILIDDINDSRPEFLNPIQTVSV- 2183

Query: 153  HIPLADLTPGSVIGKVEAADGD 174
               L    PG++I  V A D D
Sbjct: 2184 ---LESAEPGTIIANVTAIDLD 2202



 Score = 45.8 bits (107), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 57/204 (27%), Positives = 88/204 (43%), Gaps = 25/204 (12%)

Query: 43   LQFSKNEYSVSALENLPVNYVLLTVTTNKPRDL-----RVKYWLSNDYGERFSISR-QGD 96
            +QFS   Y    +ENL +   ++ V      +L     R   + S      F I    G 
Sbjct: 1311 VQFSNASYEAVIMENLALGTEIVRVQAYSIDNLNQITYRFDAYTSAQAKALFKIDAITGV 1370

Query: 97   ISLMQCLDYETEDSYRFTVYATDTLMTTSATVN--ISVVNVNDWDPRFRY-PQYELFLPH 153
            I++   +D E  D Y  TV A D      +TV   I+V++ ND  PRF +     + +P 
Sbjct: 1371 ITVKGLVDREKGDFYTLTVVADDGGPKVDSTVKVYITVLDENDNSPRFDFTSDSAISVPE 1430

Query: 154  IPLADLTPGSVIGKVEAADGDKGD--RVTLSLR-----GPYEKMFSINDSGHISI---VD 203
                D   G  +  V+A D D G   +V  SL      G +E + S +  G + +   +D
Sbjct: 1431 ----DCPVGQRVATVKARDPDAGSNGQVVFSLASGNIAGAFEIITSNDSIGEVFVAKPLD 1486

Query: 204  LSALNTSTIQLVVVATDTGNPPRQ 227
               L+   ++  VVA+D G PPR+
Sbjct: 1487 REELDHYILK--VVASDRGTPPRK 1508



 Score = 43.1 bits (100), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 54/199 (27%), Positives = 89/199 (44%), Gaps = 26/199 (13%)

Query: 44  QFSKNEYSVSALENLPVNYVL--LTVTTNKPRDLRV----KYWLSNDYGERF-----SIS 92
           +F+ +EYSV+  E   V + L       +K  +L +    + +L  +    F     S+ 
Sbjct: 347 EFNSSEYSVAITELAQVGFALPLFIQVVDKDENLGLNSMFEVYLVGNNSHHFIISPTSVQ 406

Query: 93  RQGDISLMQC--LDYETEDSYRFTVYATDTL--MTTSATVNISVVNVNDWDPRFRYPQYE 148
            + DI +     LDYET D Y F ++A +++      A V I+++N ND  P F  P Y 
Sbjct: 407 GKADIRIRVAIPLDYETVDRYDFDLFANESVPDHVGYAKVKITLINENDNRPIFSQPLYN 466

Query: 149 LFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDSGHISIVDLSA 206
           + L      ++T G+ +  V A D D G    V        ++     D+G I ++  + 
Sbjct: 467 VSL----YENITVGTSVLTVLATDNDVGTFGEVNYFFSDDPDRFSLDKDTGLIMLI--AR 520

Query: 207 LNTSTIQ---LVVVATDTG 222
           L+   IQ   L V+A D G
Sbjct: 521 LDYELIQRFTLTVIARDGG 539



 Score = 42.7 bits (99), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 40/137 (29%), Positives = 64/137 (46%), Gaps = 29/137 (21%)

Query: 65   LTVTTNKPRDLRVKYWLS---NDYG---------------ERFSIS-RQGDISLMQCLDY 105
            ++V+ + PR+ RV  WL+   ND G                +FS+  R   +  +  LD 
Sbjct: 1002 VSVSEDVPREFRV-VWLNCTDNDVGLNAELSYFITAGNVDGKFSVGYRDAVVRTVVGLDR 1060

Query: 106  ETEDSYRFTVYATDT-----LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLT 160
            ET  +Y   + A D        T +ATV ++V++VND  P F    YE  +P     D+ 
Sbjct: 1061 ETTAAYTLVLEAIDNGPVGKRRTGTATVFVTVLDVNDNRPIFLQSSYEASVPE----DIP 1116

Query: 161  PGSVIGKVEAADGDKGD 177
             G  I +++A D D+G+
Sbjct: 1117 EGHSIVQLKATDADEGE 1133



 Score = 41.6 bits (96), Expect = 0.68,   Method: Compositional matrix adjust.
 Identities = 39/124 (31%), Positives = 62/124 (50%), Gaps = 15/124 (12%)

Query: 92   SRQGDISLMQCLDYETEDSYRFTVYATDTLMTTSAT---VNISVVNVNDWDPRFRYPQYE 148
            S  G +   + +DYE      FTV A+D      A    V + +V++ND +P F  P Y+
Sbjct: 2349 SSAGKVIANRTVDYEEVHWLNFTVRASDNGSPPRAAEIPVYLEIVDINDNNPIFDQPSYQ 2408

Query: 149  LFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-DSGHISIVDL 204
              +      D+  G+VI +V A D D G+   +    + G  E  F+IN ++G IS+  L
Sbjct: 2409 EAV----FEDIAVGTVILRVTATDADSGNFALIEYSLVDG--EGKFAINPNTGDISV--L 2460

Query: 205  SALN 208
            S+L+
Sbjct: 2461 SSLD 2464



 Score = 38.9 bits (89), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 66/232 (28%), Positives = 99/232 (42%), Gaps = 25/232 (10%)

Query: 12   TLVVRAIQYDN----QDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTV 67
            TLV+ AI  DN    + R   AT+ V+    +     F ++ Y  S  E++P  + ++ +
Sbjct: 1067 TLVLEAI--DNGPVGKRRTGTATVFVTVLDVNDNRPIFLQSSYEASVPEDIPEGHSIVQL 1124

Query: 68   -TTNKPRDLRVKYW---LSNDYGERFSISRQGDISLMQC---LDYETEDSYRFTVYATD- 119
              T+       + W   L  ++G  F I   G   LM+    LD E   S+   V A + 
Sbjct: 1125 KATDADEGEFGRVWYRILHGNHGNNFRI-HVGSGLLMRGPRPLDRERNSSHVLMVEAYNH 1183

Query: 120  --TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTP-GSVIGKVEAADGDKG 176
                M +S  V + V +VND  P F   QY      + L +    G+ +  V A D D G
Sbjct: 1184 DLGPMRSSVRVIVYVEDVNDEAPVFTQQQYN----RLGLRETAGIGTSVIVVRATDKDTG 1239

Query: 177  DRVTLSLR--GPYEKMFSINDS-GHISIVDLSALNTSTIQLVVVATDTGNPP 225
            D   ++ R     E  F I++S G I  VD     T T  L+ V+   G PP
Sbjct: 1240 DGGLVNYRILSGAEGKFEIDESTGLIVTVDYLDYETKTSYLMNVSATDGAPP 1291



 Score = 38.1 bits (87), Expect = 6.9,   Method: Compositional matrix adjust.
 Identities = 62/217 (28%), Positives = 91/217 (41%), Gaps = 30/217 (13%)

Query: 25  RYALAT--------LIVSKAGTSLRELQFSKNEYSVSAL---ENLPVNYVLLTVTTNKPR 73
           RY+L T        ++V  +   +  L F  N +  + L   E+ PV     +VT    R
Sbjct: 2   RYSLVTCYAVLWLLMLVPGSWGQVNRLPFFTNHFFDTYLLISEDTPVGS---SVTQLLAR 58

Query: 74  DLR---VKYWLSNDYGERFSISR--QGDISLMQCLDYETEDSYRFTVYATDTLMTTSATV 128
           D+    + + +S +   RF       G + L Q LD ET+  +      +D     +  V
Sbjct: 59  DMDNDPLVFGVSGEEASRFFAVEPDTGVVWLRQPLDRETKSEFTVEFSVSDHQGVITRKV 118

Query: 129 NISVVNVNDWDPRFRYPQYELFLPHIPLADLTP-GSVIGKVEAADGD--KGDRVTLSLRG 185
           NI V +VND  P F    Y + +P     + TP G+ I  V A D D   G  V  S + 
Sbjct: 119 NIQVGDVNDNAPTFHNQPYSVRIP-----ENTPVGTPIFIVNATDPDLGAGGSVLYSFQP 173

Query: 186 PYEKMFSINDSGHISIV--DLSALNTSTIQLVVVATD 220
           P    F+I+ +  I  V  +L    T   QL V ATD
Sbjct: 174 P-SPFFAIDSARGIVTVIQELDYEVTQAYQLTVNATD 209



 Score = 38.1 bits (87), Expect = 7.5,   Method: Compositional matrix adjust.
 Identities = 61/285 (21%), Positives = 118/285 (41%), Gaps = 59/285 (20%)

Query: 4    EDDFL-QPITLVVRA----IQYDNQDRYALATLIVSK-----AGTSL-----RELQFSKN 48
            +D FL  P+T V+R     I  + Q+ Y L  +   +     +GT++      ++  S+ 
Sbjct: 2113 QDRFLIHPVTGVIRVGNATIDREEQESYRLTVVATDRGTVPLSGTAIVTILIDDINDSRP 2172

Query: 49   EY-----SVSALENLPVNYVLLTVTT-----NKPRDLRVKYWLSNDYGER--------FS 90
            E+     +VS LE+     ++  VT      N   +  +   ++ D  +R        F+
Sbjct: 2173 EFLNPIQTVSVLESAEPGTIIANVTAIDLDLNPKLEYHIISIVAKDDTDRLVPDQEDAFA 2232

Query: 91   IS-RQGDISLMQCLDYETEDSYRFTVYATD--------TLMTTSATVNISVVNVNDWDPR 141
            ++   G + +   L+ E   +Y  T+   D        ++   +A + +++++VND  P+
Sbjct: 2233 VNINTGSVMVKSPLNRELVATYEVTLSVIDNASDLPEHSVSVPNAKLTVNILDVNDNTPQ 2292

Query: 142  FRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSGHISI 201
            F+ P    +     L   TPG+ +  V A D DKG    ++       +  +   G++ +
Sbjct: 2293 FK-PFGITYYTERVLEGATPGTTLIAVAAVDPDKGLNGLITY-----TLLDLTPPGYVQL 2346

Query: 202  VDLSA-----------LNTSTIQLVVVATDTGNPPRQASVPAIMH 235
             D SA                +   V A+D G+PPR A +P  + 
Sbjct: 2347 EDSSAGKVIANRTVDYEEVHWLNFTVRASDNGSPPRAAEIPVYLE 2391


>gi|85725329|gb|ABC79282.1| protocadherin-15-CD1 isoform 1 [Gallus gallus]
          Length = 1899

 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 67/246 (27%), Positives = 118/246 (47%), Gaps = 27/246 (10%)

Query: 6   DFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVL- 64
           D  Q   LV++A Q +     A A L +     + ++  F+K+ Y    LE+ PV   + 
Sbjct: 356 DLHQKFDLVIKAEQDNGHPLPAFANLHIEVLDENNQKPYFTKSTYEGFILESSPVGTTIS 415

Query: 65  ----------LTVTTN---KPRDLRVKYWLSNDYGERFSISRQG---DISLMQCLDYETE 108
                     +TV  N   + +D ++  +L NDY   F++++ G    ++L+Q +D E +
Sbjct: 416 DSRNLTSPLQITVLDNDVEETKDPQLHLFL-NDYNTFFTVTQSGITRYLTLLQPVDREAQ 474

Query: 109 DSYRFTVYATDTLM-TTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGK 167
             Y F++ A+D +  +T  TVNI V++ ND  P F    Y + +      D+ PG  + K
Sbjct: 475 QLYTFSMIASDGVQESTPVTVNIVVIDANDNSPTFSNISYNVKI----YTDMGPGEGVIK 530

Query: 168 VEAADGDKG--DRVTLSLRGPYEKMFSIND-SGHISIVDLSALNTS-TIQLVVVATDTGN 223
           + A D D+G   ++   +    +  F IND +G I+I     L+   +  L V A+D+  
Sbjct: 531 LTAVDADEGPNGQIVYEILAGDQGDFIINDRTGLIAIAPGVVLSVGRSYALTVKASDSAP 590

Query: 224 PPRQAS 229
           P ++ S
Sbjct: 591 PAQRRS 596



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 58/195 (29%), Positives = 101/195 (51%), Gaps = 14/195 (7%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSN-DYGERFSISRQ-GDISLMQ 101
           +F +  YS+   E +    +LL +         ++Y + N D  + F++S+  G ++L +
Sbjct: 615 RFPQLMYSLEVSEAMRTGAILLNLQAFDREGDPIRYLIENGDPQQVFNLSQSSGLLALGK 674

Query: 102 CLDYETEDSYRFTVYATDTL--MTTSATVNISVVNVNDWDPRFRYPQYELFLP-HIPLAD 158
            LD E+ D Y   V A+D     T++ATVNI V +VND  P F     ++FLP ++ + +
Sbjct: 675 PLDRESTDRYILIVTASDGRPDGTSTATVNIVVTDVNDNGPVF-----DMFLPKNLSVQE 729

Query: 159 LTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDSGHI-SIVDLSALNTSTIQLV 215
               + +G+V A D D G   +V  SL   ++ +F I  +G I + V L+       +L+
Sbjct: 730 EEANAFVGQVRATDPDAGVNGQVHYSLAN-FKNLFRITSNGSIYTAVKLNREVRDYYELI 788

Query: 216 VVATDTGNPPRQASV 230
           V ATD    PR++++
Sbjct: 789 VEATDGAVDPRRSTL 803



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 63/201 (31%), Positives = 100/201 (49%), Gaps = 26/201 (12%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDL--RVKYWL-SNDYGERFSISR-QGDISLM 100
            F+   YSV   ENLP   V L +   K  DL   V Y + + +  E F++++  G++SL+
Sbjct: 819  FTNASYSVLVPENLPPGTVFLQIEA-KDVDLGSNVTYRIRTQEALEYFALNKYTGELSLL 877

Query: 101  QCLDYE----TEDSYRFTVYATDTLMTTS---ATVNISVVNVNDWDPRFRYPQYELFLPH 153
            + LDYE    T+ ++ F V A D+  T     ATV + V ++ND+ P F    Y   +  
Sbjct: 878  KSLDYESFSDTDATFTFLVEAFDSKGTMPPGLATVTVRVKDMNDYSPVFSKTLYRGMV-- 935

Query: 154  IPLADLTPGSVIGKVEAAD----GDKGDRVTLS---LRGPYE-KMFSIND-SGH-ISIVD 203
                D   G+VI  V A D    G    RV      ++ PY   +F + + SG  ++ V+
Sbjct: 936  --APDAVKGTVITTVSAEDQDPPGTPASRVRYKVDVVQFPYSASIFDVEENSGRVVTRVN 993

Query: 204  LSALNTSTIQLVVVATDTGNP 224
            L+   ++  +LVV+A D G+P
Sbjct: 994  LNEEPSTVFKLVVIAYDDGDP 1014



 Score = 51.6 bits (122), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 40/132 (30%), Positives = 67/132 (50%), Gaps = 10/132 (7%)

Query: 76  RVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDTLM---TTSATVNISV 132
           +V Y L+N +   F I+  G I     L+ E  D Y   V ATD  +    ++ T+ I V
Sbjct: 751 QVHYSLAN-FKNLFRITSNGSIYTAVKLNREVRDYYELIVEATDGAVDPRRSTLTLAIKV 809

Query: 133 VNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYE-KMF 191
           ++++D  P F    Y + +P     +L PG+V  ++EA D D G  VT  +R     + F
Sbjct: 810 LDIDDNSPVFTNASYSVLVPE----NLPPGTVFLQIEAKDVDLGSNVTYRIRTQEALEYF 865

Query: 192 SIND-SGHISIV 202
           ++N  +G +S++
Sbjct: 866 ALNKYTGELSLL 877


>gi|60417438|emb|CAI59611.1| cadherin 23 [Mus musculus]
          Length = 3352

 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 60/195 (30%), Positives = 92/195 (47%), Gaps = 20/195 (10%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWLSNDYGERFSIS-RQGDISLM 100
            F +  Y  +  E++ V  V+L VT           ++Y L +  G +F+I+   GDIS++
Sbjct: 2400 FDQPSYQEAVFEDIAVGTVILRVTATDADSGNFALIEYSLVDGEG-KFAINPNTGDISVL 2458

Query: 101  QCLDYETEDSYRFTVYATDT-------LMTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
              LD E +D Y  T  A D            S  V I V++VND  P+F  PQ+   +  
Sbjct: 2459 SSLDREKKDHYILTALAKDNPGDVASNRRENSVQVVIRVLDVNDCRPQFSKPQFSTSV-- 2516

Query: 154  IPLADLTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSIN-DSGHISIVDLSALNTS 210
                +   G+ +  + A D D+G   ++T SL GP  + FS++ DSG ++       +  
Sbjct: 2517 --YENEPAGTSVITMLATDQDEGSNSQLTYSLEGPGMEAFSVDMDSGLVT-TQRPLQSYE 2573

Query: 211  TIQLVVVATDTGNPP 225
               L VVATD G PP
Sbjct: 2574 RFNLTVVATDGGEPP 2588



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 67/217 (30%), Positives = 98/217 (45%), Gaps = 42/217 (19%)

Query: 45  FSKNEYSVSALENLPVNY-VLLTVTTNKPRDLRVKYWLSNDYGE-----------RFSI- 91
           FSK  Y VS LEN+     VL    T+  R        S +YG+           +F I 
Sbjct: 669 FSKPAYFVSVLENIMAGATVLFLNATDLDR--------SREYGQESIIYSLEGSSQFRIN 720

Query: 92  SRQGDISLMQCLDYETEDSYRFTVYATD-----TLMTTSATVNISVVNVNDWDPRFRYPQ 146
           +R G+I+    LD ET+  Y   V A D        T  ATVN++++++ND  P ++   
Sbjct: 721 ARSGEITTTSLLDRETKSEYILIVRAVDGGVGHNQKTGIATVNVTLLDINDNHPTWKDAP 780

Query: 147 YELFLPHIPLADLT-PGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSIND-SGHISI-- 201
           Y     +I L ++T P S +  V A D D G+  TL     P  K +S+N  +G I    
Sbjct: 781 Y-----YINLVEMTPPDSDVTTVVAVDPDLGENGTLVYSIHPPNKFYSLNSTTGKIRTTH 835

Query: 202 VDLSALNTSTIQ------LVVVATDTGNPPRQASVPA 232
           V L   N   ++      ++V  TD G PP +A+  A
Sbjct: 836 VMLDRENPDPVEAELMRKIIVSVTDCGRPPLKATSSA 872



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 65/210 (30%), Positives = 94/210 (44%), Gaps = 28/210 (13%)

Query: 45  FSKNEYSVSALENLPVNYVLLTV--TTNKPRDL-RVKYWLSNDYGERFSISRQ-GDISLM 100
           FS+  Y+VS  EN+ V   +LTV  T N       V Y+ S+D  +RFS+ +  G I L+
Sbjct: 458 FSQPLYNVSLYENITVGTSVLTVLATDNDVGTFGEVNYFFSDD-PDRFSLDKDTGLIMLI 516

Query: 101 QCLDYETEDSYRFTVYATDTL-MTTSATVNISVVNVNDWDPRFRYPQYELFL----PHIP 155
             LDYE    +  TV A D     T+  V I+V++VND  P F+   Y   L    P + 
Sbjct: 517 ARLDYELIQRFTLTVIARDGGGEETTGRVRINVLDVNDNVPTFQKDAYVGALRENEPSV- 575

Query: 156 LADLTPGSVIGKVEAADGDKGDR-------VTLSLRGPYEKMFSINDSGHISI---VDLS 205
                  + + ++ A D D           V  S  G Y  +      G IS+   +D  
Sbjct: 576 -------TQLVRLRATDEDSPPNNLITYSIVNASAFGSYFDISIYEGYGVISVSRPLDYE 628

Query: 206 ALNTSTIQLVVVATDTGNPPRQASVPAIMH 235
            +    I L V+A D GNPP  ++VP  + 
Sbjct: 629 QIPNGLIYLTVMAKDAGNPPLYSTVPVTIE 658



 Score = 45.8 bits (107), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 45/142 (31%), Positives = 68/142 (47%), Gaps = 20/142 (14%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVT-TNKPRDL--RVKYWLSNDYGERFSIS------RQG 95
            FS   Y+V  LEN P  + +L VT T++   L   + Y +     +RF I       R G
Sbjct: 2067 FSPPTYTVHLLENCPPGFSVLQVTATDEDSGLNGELVYRIEAGAQDRFLIHPVTGVIRVG 2126

Query: 96   DISLMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLP 152
            + +    +D E ++SYR TV ATD     ++ +A V I + ++ND  P F  P   + + 
Sbjct: 2127 NAT----IDREEQESYRLTVVATDRGTVPLSGTAIVTILIDDINDSRPEFLNPIQTVSV- 2181

Query: 153  HIPLADLTPGSVIGKVEAADGD 174
               L    PG++I  V A D D
Sbjct: 2182 ---LESAEPGTIIANVTAIDLD 2200



 Score = 45.8 bits (107), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 57/203 (28%), Positives = 87/203 (42%), Gaps = 23/203 (11%)

Query: 43   LQFSKNEYSVSALENLPVNYVLLTVTTNKPRDL-----RVKYWLSNDYGERFSISR-QGD 96
            +QFS   Y    +ENL +   ++ V      +L     R   + S      F I    G 
Sbjct: 1309 VQFSNASYEAVIMENLALGTEIVRVQAYSIDNLNQITYRFDAYTSAQAKALFKIDAITGV 1368

Query: 97   ISLMQCLDYETEDSYRFTVYATDTLMTTSATVN--ISVVNVNDWDPRFRYPQYELFLPHI 154
            I++   +D E  D Y  TV A D      +TV   I+V++ ND  PRF +         +
Sbjct: 1369 ITVKGLVDREKGDFYTLTVVADDGGPKVDSTVKVYITVLDENDNSPRFDFTSDSAI--SV 1426

Query: 155  PLADLTPGSVIGKVEAADGDKGD--RVTLSLR-----GPYEKMFSINDSGHISI---VDL 204
            P  D   G  +  V+A D D G   +V  SL      G +E + S +  G + +   +D 
Sbjct: 1427 P-EDCPVGQRVATVKARDPDAGSNGQVVFSLASGNIAGAFEIITSNDSIGEVFVAKPLDR 1485

Query: 205  SALNTSTIQLVVVATDTGNPPRQ 227
              L+   ++  VVA+D G PPR+
Sbjct: 1486 EELDHYILK--VVASDRGTPPRK 1506



 Score = 43.5 bits (101), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 53/197 (26%), Positives = 88/197 (44%), Gaps = 24/197 (12%)

Query: 44  QFSKNEYSVSALENLPVNYVL----LTVTTNKPRDLRVKYWLSNDYGERF-----SISRQ 94
           +F+ +EYSV+  E   V + L      V  ++  +   + +L  +    F     S+  +
Sbjct: 347 EFNSSEYSVAITELAQVGFALPLFIQVVDKDEGLNSMFEVYLVGNNSHHFIISPTSVQGK 406

Query: 95  GDISLMQC--LDYETEDSYRFTVYATDTL--MTTSATVNISVVNVNDWDPRFRYPQYELF 150
            DI +     LDYET D Y F ++A +++      A V I+++N ND  P F  P Y + 
Sbjct: 407 ADIRIRVAIPLDYETVDRYDFDLFANESVPDHVGYAKVKITLINENDNRPIFSQPLYNVS 466

Query: 151 LPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDSGHISIVDLSALN 208
           L      ++T G+ +  V A D D G    V        ++     D+G I ++  + L+
Sbjct: 467 L----YENITVGTSVLTVLATDNDVGTFGEVNYFFSDDPDRFSLDKDTGLIMLI--ARLD 520

Query: 209 TSTIQ---LVVVATDTG 222
              IQ   L V+A D G
Sbjct: 521 YELIQRFTLTVIARDGG 537



 Score = 42.7 bits (99), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 40/137 (29%), Positives = 64/137 (46%), Gaps = 29/137 (21%)

Query: 65   LTVTTNKPRDLRVKYWLS---NDYG---------------ERFSIS-RQGDISLMQCLDY 105
            ++V+ + PR+ RV  WL+   ND G                +FS+  R   +  +  LD 
Sbjct: 1000 VSVSEDVPREFRV-VWLNCTDNDVGLNAELSYFITAGNVDGKFSVGYRDAVVRTVVGLDR 1058

Query: 106  ETEDSYRFTVYATDT-----LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLT 160
            ET  +Y   + A D        T +ATV ++V++VND  P F    YE  +P     D+ 
Sbjct: 1059 ETTAAYTLVLEAIDNGPVGKRRTGTATVFVTVLDVNDNRPIFLQSSYEASVPE----DIP 1114

Query: 161  PGSVIGKVEAADGDKGD 177
             G  I +++A D D+G+
Sbjct: 1115 EGHSIVQLKATDADEGE 1131



 Score = 41.6 bits (96), Expect = 0.67,   Method: Compositional matrix adjust.
 Identities = 39/124 (31%), Positives = 62/124 (50%), Gaps = 15/124 (12%)

Query: 92   SRQGDISLMQCLDYETEDSYRFTVYATDTLMTTSAT---VNISVVNVNDWDPRFRYPQYE 148
            S  G +   + +DYE      FTV A+D      A    V + +V++ND +P F  P Y+
Sbjct: 2347 SSAGKVIANRTVDYEEVHWLNFTVRASDNGSPPRAAEIPVYLEIVDINDNNPIFDQPSYQ 2406

Query: 149  LFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-DSGHISIVDL 204
              +      D+  G+VI +V A D D G+   +    + G  E  F+IN ++G IS+  L
Sbjct: 2407 EAV----FEDIAVGTVILRVTATDADSGNFALIEYSLVDG--EGKFAINPNTGDISV--L 2458

Query: 205  SALN 208
            S+L+
Sbjct: 2459 SSLD 2462



 Score = 38.9 bits (89), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 66/232 (28%), Positives = 99/232 (42%), Gaps = 25/232 (10%)

Query: 12   TLVVRAIQYDN----QDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTV 67
            TLV+ AI  DN    + R   AT+ V+    +     F ++ Y  S  E++P  + ++ +
Sbjct: 1065 TLVLEAI--DNGPVGKRRTGTATVFVTVLDVNDNRPIFLQSSYEASVPEDIPEGHSIVQL 1122

Query: 68   -TTNKPRDLRVKYW---LSNDYGERFSISRQGDISLMQC---LDYETEDSYRFTVYATD- 119
              T+       + W   L  ++G  F I   G   LM+    LD E   S+   V A + 
Sbjct: 1123 KATDADEGEFGRVWYRILHGNHGNNFRI-HVGSGLLMRGPRPLDRERNSSHVLMVEAYNH 1181

Query: 120  --TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTP-GSVIGKVEAADGDKG 176
                M +S  V + V +VND  P F   QY      + L +    G+ +  V A D D G
Sbjct: 1182 DLGPMRSSVRVIVYVEDVNDEAPVFTQQQYN----RLGLRETAGIGTSVIVVRATDKDTG 1237

Query: 177  DRVTLSLR--GPYEKMFSINDS-GHISIVDLSALNTSTIQLVVVATDTGNPP 225
            D   ++ R     E  F I++S G I  VD     T T  L+ V+   G PP
Sbjct: 1238 DGGLVNYRILSGAEGKFEIDESTGLIVTVDYLDYETKTSYLMNVSATDGAPP 1289



 Score = 38.1 bits (87), Expect = 7.1,   Method: Compositional matrix adjust.
 Identities = 62/217 (28%), Positives = 91/217 (41%), Gaps = 30/217 (13%)

Query: 25  RYALAT--------LIVSKAGTSLRELQFSKNEYSVSAL---ENLPVNYVLLTVTTNKPR 73
           RY+L T        ++V  +   +  L F  N +  + L   E+ PV     +VT    R
Sbjct: 2   RYSLVTCYAVLWLLMLVPGSWGQVNRLPFFTNHFFDTYLLISEDTPVGS---SVTQLLAR 58

Query: 74  DLR---VKYWLSNDYGERFSISR--QGDISLMQCLDYETEDSYRFTVYATDTLMTTSATV 128
           D+    + + +S +   RF       G + L Q LD ET+  +      +D     +  V
Sbjct: 59  DMDNDPLVFGVSGEEASRFFAVEPDTGVVWLRQPLDRETKSEFTVEFSVSDHQGVITRKV 118

Query: 129 NISVVNVNDWDPRFRYPQYELFLPHIPLADLTP-GSVIGKVEAADGD--KGDRVTLSLRG 185
           NI V +VND  P F    Y + +P     + TP G+ I  V A D D   G  V  S + 
Sbjct: 119 NIQVGDVNDNAPTFHNQPYSVRIP-----ENTPVGTPIFIVNATDPDLGAGGSVLYSFQP 173

Query: 186 PYEKMFSINDSGHISIV--DLSALNTSTIQLVVVATD 220
           P    F+I+ +  I  V  +L    T   QL V ATD
Sbjct: 174 P-SPFFAIDSARGIVTVIQELDYEVTQAYQLTVNATD 209



 Score = 38.1 bits (87), Expect = 7.4,   Method: Compositional matrix adjust.
 Identities = 61/285 (21%), Positives = 118/285 (41%), Gaps = 59/285 (20%)

Query: 4    EDDFL-QPITLVVRA----IQYDNQDRYALATLIVSK-----AGTSL-----RELQFSKN 48
            +D FL  P+T V+R     I  + Q+ Y L  +   +     +GT++      ++  S+ 
Sbjct: 2111 QDRFLIHPVTGVIRVGNATIDREEQESYRLTVVATDRGTVPLSGTAIVTILIDDINDSRP 2170

Query: 49   EY-----SVSALENLPVNYVLLTVTT-----NKPRDLRVKYWLSNDYGER--------FS 90
            E+     +VS LE+     ++  VT      N   +  +   ++ D  +R        F+
Sbjct: 2171 EFLNPIQTVSVLESAEPGTIIANVTAIDLDLNPKLEYHIISIVAKDDTDRLVPDQEDAFA 2230

Query: 91   IS-RQGDISLMQCLDYETEDSYRFTVYATD--------TLMTTSATVNISVVNVNDWDPR 141
            ++   G + +   L+ E   +Y  T+   D        ++   +A + +++++VND  P+
Sbjct: 2231 VNINTGSVMVKSPLNRELVATYEVTLSVIDNASDLPEHSVSVPNAKLTVNILDVNDNTPQ 2290

Query: 142  FRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSGHISI 201
            F+ P    +     L   TPG+ +  V A D DKG    ++       +  +   G++ +
Sbjct: 2291 FK-PFGITYYTERVLEGATPGTTLIAVAAVDPDKGLNGLITY-----TLLDLTPPGYVQL 2344

Query: 202  VDLSA-----------LNTSTIQLVVVATDTGNPPRQASVPAIMH 235
             D SA                +   V A+D G+PPR A +P  + 
Sbjct: 2345 EDSSAGKVIANRTVDYEEVHWLNFTVRASDNGSPPRAAEIPVYLE 2389


>gi|358001060|ref|NP_001239564.1| cadherin-23 isoform 2 precursor [Mus musculus]
          Length = 3352

 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 60/195 (30%), Positives = 92/195 (47%), Gaps = 20/195 (10%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWLSNDYGERFSIS-RQGDISLM 100
            F +  Y  +  E++ V  V+L VT           ++Y L +  G +F+I+   GDIS++
Sbjct: 2400 FDQPSYQEAVFEDIAVGTVILRVTATDADSGNFALIEYSLVDGEG-KFAINPNTGDISVL 2458

Query: 101  QCLDYETEDSYRFTVYATDT-------LMTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
              LD E +D Y  T  A D            S  V I V++VND  P+F  PQ+   +  
Sbjct: 2459 SSLDREKKDHYILTALAKDNPGDVASNRRENSVQVVIRVLDVNDCRPQFSKPQFSTSV-- 2516

Query: 154  IPLADLTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSIN-DSGHISIVDLSALNTS 210
                +   G+ +  + A D D+G   ++T SL GP  + FS++ DSG ++       +  
Sbjct: 2517 --YENEPAGTSVITMLATDQDEGSNSQLTYSLEGPGMEAFSVDMDSGLVT-TQRPLQSYE 2573

Query: 211  TIQLVVVATDTGNPP 225
               L VVATD G PP
Sbjct: 2574 RFNLTVVATDGGEPP 2588



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 67/217 (30%), Positives = 98/217 (45%), Gaps = 42/217 (19%)

Query: 45  FSKNEYSVSALENLPVNY-VLLTVTTNKPRDLRVKYWLSNDYGE-----------RFSI- 91
           FSK  Y VS LEN+     VL    T+  R        S +YG+           +F I 
Sbjct: 669 FSKPAYFVSVLENIMAGATVLFLNATDLDR--------SREYGQESIIYSLEGSSQFRIN 720

Query: 92  SRQGDISLMQCLDYETEDSYRFTVYATD-----TLMTTSATVNISVVNVNDWDPRFRYPQ 146
           +R G+I+    LD ET+  Y   V A D        T  ATVN++++++ND  P ++   
Sbjct: 721 ARSGEITTTSLLDRETKSEYILIVRAVDGGVGHNQKTGIATVNVTLLDINDNHPTWKDAP 780

Query: 147 YELFLPHIPLADLT-PGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSIND-SGHISI-- 201
           Y     +I L ++T P S +  V A D D G+  TL     P  K +S+N  +G I    
Sbjct: 781 Y-----YINLVEMTPPDSDVTTVVAVDPDLGENGTLVYSIHPPNKFYSLNSTTGKIRTTH 835

Query: 202 VDLSALNTSTIQ------LVVVATDTGNPPRQASVPA 232
           V L   N   ++      ++V  TD G PP +A+  A
Sbjct: 836 VMLDRENPDPVEAELMRKIIVSVTDCGRPPLKATSSA 872



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 65/210 (30%), Positives = 94/210 (44%), Gaps = 28/210 (13%)

Query: 45  FSKNEYSVSALENLPVNYVLLTV--TTNKPRDL-RVKYWLSNDYGERFSISRQ-GDISLM 100
           FS+  Y+VS  EN+ V   +LTV  T N       V Y+ S+D  +RFS+ +  G I L+
Sbjct: 458 FSQPLYNVSLYENITVGTSVLTVLATDNDVGTFGEVNYFFSDD-PDRFSLDKDTGLIMLI 516

Query: 101 QCLDYETEDSYRFTVYATDTL-MTTSATVNISVVNVNDWDPRFRYPQYELFL----PHIP 155
             LDYE    +  TV A D     T+  V I+V++VND  P F+   Y   L    P + 
Sbjct: 517 ARLDYELIQRFTLTVIARDGGGEETTGRVRINVLDVNDNVPTFQKDAYVGALRENEPSV- 575

Query: 156 LADLTPGSVIGKVEAADGDKGDR-------VTLSLRGPYEKMFSINDSGHISI---VDLS 205
                  + + ++ A D D           V  S  G Y  +      G IS+   +D  
Sbjct: 576 -------TQLVRLRATDEDSPPNNLITYSIVNASAFGSYFDISIYEGYGVISVSRPLDYE 628

Query: 206 ALNTSTIQLVVVATDTGNPPRQASVPAIMH 235
            +    I L V+A D GNPP  ++VP  + 
Sbjct: 629 QIPNGLIYLTVMAKDAGNPPLYSTVPVTIE 658



 Score = 45.8 bits (107), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 45/142 (31%), Positives = 68/142 (47%), Gaps = 20/142 (14%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVT-TNKPRDL--RVKYWLSNDYGERFSIS------RQG 95
            FS   Y+V  LEN P  + +L VT T++   L   + Y +     +RF I       R G
Sbjct: 2067 FSPPTYTVHLLENCPPGFSVLQVTATDEDSGLNGELVYRIEAGAQDRFLIHPVTGVIRVG 2126

Query: 96   DISLMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLP 152
            + +    +D E ++SYR TV ATD     ++ +A V I + ++ND  P F  P   + + 
Sbjct: 2127 NAT----IDREEQESYRLTVVATDRGTVPLSGTAIVTILIDDINDSRPEFLNPIQTVSV- 2181

Query: 153  HIPLADLTPGSVIGKVEAADGD 174
               L    PG++I  V A D D
Sbjct: 2182 ---LESAEPGTIIANVTAIDLD 2200



 Score = 45.8 bits (107), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 57/203 (28%), Positives = 87/203 (42%), Gaps = 23/203 (11%)

Query: 43   LQFSKNEYSVSALENLPVNYVLLTVTTNKPRDL-----RVKYWLSNDYGERFSISR-QGD 96
            +QFS   Y    +ENL +   ++ V      +L     R   + S      F I    G 
Sbjct: 1309 VQFSNASYEAVIMENLALGTEIVRVQAYSIDNLNQITYRFDAYTSAQAKALFKIDAITGV 1368

Query: 97   ISLMQCLDYETEDSYRFTVYATDTLMTTSATVN--ISVVNVNDWDPRFRYPQYELFLPHI 154
            I++   +D E  D Y  TV A D      +TV   I+V++ ND  PRF +         +
Sbjct: 1369 ITVKGLVDREKGDFYTLTVVADDGGPKVDSTVKVYITVLDENDNSPRFDFTSDSAI--SV 1426

Query: 155  PLADLTPGSVIGKVEAADGDKGD--RVTLSLR-----GPYEKMFSINDSGHISI---VDL 204
            P  D   G  +  V+A D D G   +V  SL      G +E + S +  G + +   +D 
Sbjct: 1427 P-EDCPVGQRVATVKARDPDAGSNGQVVFSLASGNIAGAFEIITSNDSIGEVFVAKPLDR 1485

Query: 205  SALNTSTIQLVVVATDTGNPPRQ 227
              L+   ++  VVA+D G PPR+
Sbjct: 1486 EELDHYILK--VVASDRGTPPRK 1506



 Score = 43.5 bits (101), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 53/197 (26%), Positives = 88/197 (44%), Gaps = 24/197 (12%)

Query: 44  QFSKNEYSVSALENLPVNYVL----LTVTTNKPRDLRVKYWLSNDYGERF-----SISRQ 94
           +F+ +EYSV+  E   V + L      V  ++  +   + +L  +    F     S+  +
Sbjct: 347 EFNSSEYSVAITELAQVGFALPLFIQVVDKDEGLNSMFEVYLVGNNSHHFIISPTSVQGK 406

Query: 95  GDISLMQC--LDYETEDSYRFTVYATDTL--MTTSATVNISVVNVNDWDPRFRYPQYELF 150
            DI +     LDYET D Y F ++A +++      A V I+++N ND  P F  P Y + 
Sbjct: 407 ADIRIRVAIPLDYETVDRYDFDLFANESVPDHVGYAKVKITLINENDNRPIFSQPLYNVS 466

Query: 151 LPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDSGHISIVDLSALN 208
           L      ++T G+ +  V A D D G    V        ++     D+G I ++  + L+
Sbjct: 467 L----YENITVGTSVLTVLATDNDVGTFGEVNYFFSDDPDRFSLDKDTGLIMLI--ARLD 520

Query: 209 TSTIQ---LVVVATDTG 222
              IQ   L V+A D G
Sbjct: 521 YELIQRFTLTVIARDGG 537



 Score = 42.7 bits (99), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 40/137 (29%), Positives = 64/137 (46%), Gaps = 29/137 (21%)

Query: 65   LTVTTNKPRDLRVKYWLS---NDYG---------------ERFSIS-RQGDISLMQCLDY 105
            ++V+ + PR+ RV  WL+   ND G                +FS+  R   +  +  LD 
Sbjct: 1000 VSVSEDVPREFRV-VWLNCTDNDVGLNAELSYFITAGNVDGKFSVGYRDAVVRTVVGLDR 1058

Query: 106  ETEDSYRFTVYATDT-----LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLT 160
            ET  +Y   + A D        T +ATV ++V++VND  P F    YE  +P     D+ 
Sbjct: 1059 ETTAAYTLVLEAIDNGPVGKRRTGTATVFVTVLDVNDNRPIFLQSSYEASVPE----DIP 1114

Query: 161  PGSVIGKVEAADGDKGD 177
             G  I +++A D D+G+
Sbjct: 1115 EGHSIVQLKATDADEGE 1131



 Score = 41.6 bits (96), Expect = 0.67,   Method: Compositional matrix adjust.
 Identities = 39/124 (31%), Positives = 62/124 (50%), Gaps = 15/124 (12%)

Query: 92   SRQGDISLMQCLDYETEDSYRFTVYATDTLMTTSAT---VNISVVNVNDWDPRFRYPQYE 148
            S  G +   + +DYE      FTV A+D      A    V + +V++ND +P F  P Y+
Sbjct: 2347 SSAGKVIANRTVDYEEVHWLNFTVRASDNGSPPRAAEIPVYLEIVDINDNNPIFDQPSYQ 2406

Query: 149  LFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-DSGHISIVDL 204
              +      D+  G+VI +V A D D G+   +    + G  E  F+IN ++G IS+  L
Sbjct: 2407 EAV----FEDIAVGTVILRVTATDADSGNFALIEYSLVDG--EGKFAINPNTGDISV--L 2458

Query: 205  SALN 208
            S+L+
Sbjct: 2459 SSLD 2462



 Score = 38.9 bits (89), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 66/232 (28%), Positives = 99/232 (42%), Gaps = 25/232 (10%)

Query: 12   TLVVRAIQYDN----QDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTV 67
            TLV+ AI  DN    + R   AT+ V+    +     F ++ Y  S  E++P  + ++ +
Sbjct: 1065 TLVLEAI--DNGPVGKRRTGTATVFVTVLDVNDNRPIFLQSSYEASVPEDIPEGHSIVQL 1122

Query: 68   -TTNKPRDLRVKYW---LSNDYGERFSISRQGDISLMQC---LDYETEDSYRFTVYATD- 119
              T+       + W   L  ++G  F I   G   LM+    LD E   S+   V A + 
Sbjct: 1123 KATDADEGEFGRVWYRILHGNHGNNFRI-HVGSGLLMRGPRPLDRERNSSHVLMVEAYNH 1181

Query: 120  --TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTP-GSVIGKVEAADGDKG 176
                M +S  V + V +VND  P F   QY      + L +    G+ +  V A D D G
Sbjct: 1182 DLGPMRSSVRVIVYVEDVNDEAPVFTQQQYN----RLGLRETAGIGTSVIVVRATDKDTG 1237

Query: 177  DRVTLSLR--GPYEKMFSINDS-GHISIVDLSALNTSTIQLVVVATDTGNPP 225
            D   ++ R     E  F I++S G I  VD     T T  L+ V+   G PP
Sbjct: 1238 DGGLVNYRILSGAEGKFEIDESTGLIVTVDYLDYETKTSYLMNVSATDGAPP 1289



 Score = 38.1 bits (87), Expect = 7.1,   Method: Compositional matrix adjust.
 Identities = 62/217 (28%), Positives = 91/217 (41%), Gaps = 30/217 (13%)

Query: 25  RYALAT--------LIVSKAGTSLRELQFSKNEYSVSAL---ENLPVNYVLLTVTTNKPR 73
           RY+L T        ++V  +   +  L F  N +  + L   E+ PV     +VT    R
Sbjct: 2   RYSLVTCYAVLWLLMLVPGSWGQVNRLPFFTNHFFDTYLLISEDTPVGS---SVTQLLAR 58

Query: 74  DLR---VKYWLSNDYGERFSISR--QGDISLMQCLDYETEDSYRFTVYATDTLMTTSATV 128
           D+    + + +S +   RF       G + L Q LD ET+  +      +D     +  V
Sbjct: 59  DMDNDPLVFGVSGEEASRFFAVEPDTGVVWLRQPLDRETKSEFTVEFSVSDHQGVITRKV 118

Query: 129 NISVVNVNDWDPRFRYPQYELFLPHIPLADLTP-GSVIGKVEAADGD--KGDRVTLSLRG 185
           NI V +VND  P F    Y + +P     + TP G+ I  V A D D   G  V  S + 
Sbjct: 119 NIQVGDVNDNAPTFHNQPYSVRIP-----ENTPVGTPIFIVNATDPDLGAGGSVLYSFQP 173

Query: 186 PYEKMFSINDSGHISIV--DLSALNTSTIQLVVVATD 220
           P    F+I+ +  I  V  +L    T   QL V ATD
Sbjct: 174 P-SPFFAIDSARGIVTVIQELDYEVTQAYQLTVNATD 209



 Score = 38.1 bits (87), Expect = 7.4,   Method: Compositional matrix adjust.
 Identities = 61/285 (21%), Positives = 118/285 (41%), Gaps = 59/285 (20%)

Query: 4    EDDFL-QPITLVVRA----IQYDNQDRYALATLIVSK-----AGTSL-----RELQFSKN 48
            +D FL  P+T V+R     I  + Q+ Y L  +   +     +GT++      ++  S+ 
Sbjct: 2111 QDRFLIHPVTGVIRVGNATIDREEQESYRLTVVATDRGTVPLSGTAIVTILIDDINDSRP 2170

Query: 49   EY-----SVSALENLPVNYVLLTVTT-----NKPRDLRVKYWLSNDYGER--------FS 90
            E+     +VS LE+     ++  VT      N   +  +   ++ D  +R        F+
Sbjct: 2171 EFLNPIQTVSVLESAEPGTIIANVTAIDLDLNPKLEYHIISIVAKDDTDRLVPDQEDAFA 2230

Query: 91   IS-RQGDISLMQCLDYETEDSYRFTVYATD--------TLMTTSATVNISVVNVNDWDPR 141
            ++   G + +   L+ E   +Y  T+   D        ++   +A + +++++VND  P+
Sbjct: 2231 VNINTGSVMVKSPLNRELVATYEVTLSVIDNASDLPEHSVSVPNAKLTVNILDVNDNTPQ 2290

Query: 142  FRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSGHISI 201
            F+ P    +     L   TPG+ +  V A D DKG    ++       +  +   G++ +
Sbjct: 2291 FK-PFGITYYTERVLEGATPGTTLIAVAAVDPDKGLNGLITY-----TLLDLTPPGYVQL 2344

Query: 202  VDLSA-----------LNTSTIQLVVVATDTGNPPRQASVPAIMH 235
             D SA                +   V A+D G+PPR A +P  + 
Sbjct: 2345 EDSSAGKVIANRTVDYEEVHWLNFTVRASDNGSPPRAAEIPVYLE 2389


>gi|341940299|sp|Q99PF4.2|CAD23_MOUSE RecName: Full=Cadherin-23; AltName: Full=Otocadherin; Flags:
            Precursor
          Length = 3354

 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 60/195 (30%), Positives = 92/195 (47%), Gaps = 20/195 (10%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWLSNDYGERFSIS-RQGDISLM 100
            F +  Y  +  E++ V  V+L VT           ++Y L +  G +F+I+   GDIS++
Sbjct: 2402 FDQPSYQEAVFEDIAVGTVILRVTATDADSGNFALIEYSLVDGEG-KFAINPNTGDISVL 2460

Query: 101  QCLDYETEDSYRFTVYATDT-------LMTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
              LD E +D Y  T  A D            S  V I V++VND  P+F  PQ+   +  
Sbjct: 2461 SSLDREKKDHYILTALAKDNPGDVASNRRENSVQVVIRVLDVNDCRPQFSKPQFSTSV-- 2518

Query: 154  IPLADLTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSIN-DSGHISIVDLSALNTS 210
                +   G+ +  + A D D+G   ++T SL GP  + FS++ DSG ++       +  
Sbjct: 2519 --YENEPAGTSVITMLATDQDEGSNSQLTYSLEGPGMEAFSVDMDSGLVT-TQRPLQSYE 2575

Query: 211  TIQLVVVATDTGNPP 225
               L VVATD G PP
Sbjct: 2576 RFNLTVVATDGGEPP 2590



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 67/217 (30%), Positives = 98/217 (45%), Gaps = 42/217 (19%)

Query: 45  FSKNEYSVSALENLPVNY-VLLTVTTNKPRDLRVKYWLSNDYGE-----------RFSI- 91
           FSK  Y VS LEN+     VL    T+  R        S +YG+           +F I 
Sbjct: 671 FSKPAYFVSVLENIMAGATVLFLNATDLDR--------SREYGQESIIYSLEGSSQFRIN 722

Query: 92  SRQGDISLMQCLDYETEDSYRFTVYATD-----TLMTTSATVNISVVNVNDWDPRFRYPQ 146
           +R G+I+    LD ET+  Y   V A D        T  ATVN++++++ND  P ++   
Sbjct: 723 ARSGEITTTSLLDRETKSEYILIVRAVDGGVGHNQKTGIATVNVTLLDINDNHPTWKDAP 782

Query: 147 YELFLPHIPLADLT-PGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSIND-SGHISI-- 201
           Y     +I L ++T P S +  V A D D G+  TL     P  K +S+N  +G I    
Sbjct: 783 Y-----YINLVEMTPPDSDVTTVVAVDPDLGENGTLVYSIHPPNKFYSLNSTTGKIRTTH 837

Query: 202 VDLSALNTSTIQ------LVVVATDTGNPPRQASVPA 232
           V L   N   ++      ++V  TD G PP +A+  A
Sbjct: 838 VMLDRENPDPVEAELMRKIIVSVTDCGRPPLKATSSA 874



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 65/210 (30%), Positives = 94/210 (44%), Gaps = 28/210 (13%)

Query: 45  FSKNEYSVSALENLPVNYVLLTV--TTNKPRDL-RVKYWLSNDYGERFSISRQ-GDISLM 100
           FS+  Y+VS  EN+ V   +LTV  T N       V Y+ S+D  +RFS+ +  G I L+
Sbjct: 460 FSQPLYNVSLYENITVGTSVLTVLATDNDVGTFGEVNYFFSDD-PDRFSLDKDTGLIMLI 518

Query: 101 QCLDYETEDSYRFTVYATDTL-MTTSATVNISVVNVNDWDPRFRYPQYELFL----PHIP 155
             LDYE    +  TV A D     T+  V I+V++VND  P F+   Y   L    P + 
Sbjct: 519 ARLDYELIQRFTLTVIARDGGGEETTGRVRINVLDVNDNVPTFQKDAYVGALRENEPSV- 577

Query: 156 LADLTPGSVIGKVEAADGDKGDR-------VTLSLRGPYEKMFSINDSGHISI---VDLS 205
                  + + ++ A D D           V  S  G Y  +      G IS+   +D  
Sbjct: 578 -------TQLVRLRATDEDSPPNNLITYSIVNASAFGSYFDISIYEGYGVISVSRPLDYE 630

Query: 206 ALNTSTIQLVVVATDTGNPPRQASVPAIMH 235
            +    I L V+A D GNPP  ++VP  + 
Sbjct: 631 QIPNGLIYLTVMAKDAGNPPLYSTVPVTIE 660



 Score = 45.8 bits (107), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 45/142 (31%), Positives = 68/142 (47%), Gaps = 20/142 (14%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVT-TNKPRDL--RVKYWLSNDYGERFSIS------RQG 95
            FS   Y+V  LEN P  + +L VT T++   L   + Y +     +RF I       R G
Sbjct: 2069 FSPPTYTVHLLENCPPGFSVLQVTATDEDSGLNGELVYRIEAGAQDRFLIHPVTGVIRVG 2128

Query: 96   DISLMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLP 152
            + +    +D E ++SYR TV ATD     ++ +A V I + ++ND  P F  P   + + 
Sbjct: 2129 NAT----IDREEQESYRLTVVATDRGTVPLSGTAIVTILIDDINDSRPEFLNPIQTVSV- 2183

Query: 153  HIPLADLTPGSVIGKVEAADGD 174
               L    PG++I  V A D D
Sbjct: 2184 ---LESAEPGTIIANVTAIDLD 2202



 Score = 45.8 bits (107), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 57/204 (27%), Positives = 88/204 (43%), Gaps = 25/204 (12%)

Query: 43   LQFSKNEYSVSALENLPVNYVLLTVTTNKPRDL-----RVKYWLSNDYGERFSISR-QGD 96
            +QFS   Y    +ENL +   ++ V      +L     R   + S      F I    G 
Sbjct: 1311 VQFSNASYEAVIMENLALGTEIVRVQAYSIDNLNQITYRFDAYTSAQAKALFKIDAITGV 1370

Query: 97   ISLMQCLDYETEDSYRFTVYATDTLMTTSATVN--ISVVNVNDWDPRFRY-PQYELFLPH 153
            I++   +D E  D Y  TV A D      +TV   I+V++ ND  PRF +     + +P 
Sbjct: 1371 ITVKGLVDREKGDFYTLTVVADDGGPKVDSTVKVYITVLDENDNSPRFDFTSDSAISVPE 1430

Query: 154  IPLADLTPGSVIGKVEAADGDKGD--RVTLSLR-----GPYEKMFSINDSGHISI---VD 203
                D   G  +  V+A D D G   +V  SL      G +E + S +  G + +   +D
Sbjct: 1431 ----DCPVGQRVATVKARDPDAGSNGQVVFSLASGNIAGAFEIITSNDSIGEVFVAKPLD 1486

Query: 204  LSALNTSTIQLVVVATDTGNPPRQ 227
               L+   ++  VVA+D G PPR+
Sbjct: 1487 REELDHYILK--VVASDRGTPPRK 1508



 Score = 45.4 bits (106), Expect = 0.051,   Method: Compositional matrix adjust.
 Identities = 55/199 (27%), Positives = 89/199 (44%), Gaps = 26/199 (13%)

Query: 44  QFSKNEYSVSALENLPVNYVL--LTVTTNKPRDLRV----KYWLSNDYGERF-----SIS 92
           +F+ +EYSV+  E   V + L       +K  DL +    + +L  +    F     S+ 
Sbjct: 347 EFNSSEYSVAITELAQVGFALPLFIQVVDKDEDLGLNSMFEVYLVGNNSHHFIISPTSVQ 406

Query: 93  RQGDISLMQC--LDYETEDSYRFTVYATDTL--MTTSATVNISVVNVNDWDPRFRYPQYE 148
            + DI +     LDYET D Y F ++A +++      A V I+++N ND  P F  P Y 
Sbjct: 407 GKADIRIRVAIPLDYETVDRYDFDLFANESVPDHVGYAKVKITLINENDNRPIFSQPLYN 466

Query: 149 LFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDSGHISIVDLSA 206
           + L      ++T G+ +  V A D D G    V        ++     D+G I ++  + 
Sbjct: 467 VSL----YENITVGTSVLTVLATDNDVGTFGEVNYFFSDDPDRFSLDKDTGLIMLI--AR 520

Query: 207 LNTSTIQ---LVVVATDTG 222
           L+   IQ   L V+A D G
Sbjct: 521 LDYELIQRFTLTVIARDGG 539



 Score = 42.7 bits (99), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 40/137 (29%), Positives = 64/137 (46%), Gaps = 29/137 (21%)

Query: 65   LTVTTNKPRDLRVKYWLS---NDYG---------------ERFSIS-RQGDISLMQCLDY 105
            ++V+ + PR+ RV  WL+   ND G                +FS+  R   +  +  LD 
Sbjct: 1002 VSVSEDVPREFRV-VWLNCTDNDVGLNAELSYFITAGNVDGKFSVGYRDAVVRTVVGLDR 1060

Query: 106  ETEDSYRFTVYATDT-----LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLT 160
            ET  +Y   + A D        T +ATV ++V++VND  P F    YE  +P     D+ 
Sbjct: 1061 ETTAAYTLVLEAIDNGPVGKRRTGTATVFVTVLDVNDNRPIFLQSSYEASVPE----DIP 1116

Query: 161  PGSVIGKVEAADGDKGD 177
             G  I +++A D D+G+
Sbjct: 1117 EGHSIVQLKATDADEGE 1133



 Score = 41.6 bits (96), Expect = 0.68,   Method: Compositional matrix adjust.
 Identities = 39/124 (31%), Positives = 62/124 (50%), Gaps = 15/124 (12%)

Query: 92   SRQGDISLMQCLDYETEDSYRFTVYATDTLMTTSAT---VNISVVNVNDWDPRFRYPQYE 148
            S  G +   + +DYE      FTV A+D      A    V + +V++ND +P F  P Y+
Sbjct: 2349 SSAGKVIANRTVDYEEVHWLNFTVRASDNGSPPRAAEIPVYLEIVDINDNNPIFDQPSYQ 2408

Query: 149  LFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-DSGHISIVDL 204
              +      D+  G+VI +V A D D G+   +    + G  E  F+IN ++G IS+  L
Sbjct: 2409 EAV----FEDIAVGTVILRVTATDADSGNFALIEYSLVDG--EGKFAINPNTGDISV--L 2460

Query: 205  SALN 208
            S+L+
Sbjct: 2461 SSLD 2464



 Score = 38.9 bits (89), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 66/232 (28%), Positives = 99/232 (42%), Gaps = 25/232 (10%)

Query: 12   TLVVRAIQYDN----QDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTV 67
            TLV+ AI  DN    + R   AT+ V+    +     F ++ Y  S  E++P  + ++ +
Sbjct: 1067 TLVLEAI--DNGPVGKRRTGTATVFVTVLDVNDNRPIFLQSSYEASVPEDIPEGHSIVQL 1124

Query: 68   -TTNKPRDLRVKYW---LSNDYGERFSISRQGDISLMQC---LDYETEDSYRFTVYATD- 119
              T+       + W   L  ++G  F I   G   LM+    LD E   S+   V A + 
Sbjct: 1125 KATDADEGEFGRVWYRILHGNHGNNFRI-HVGSGLLMRGPRPLDRERNSSHVLMVEAYNH 1183

Query: 120  --TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTP-GSVIGKVEAADGDKG 176
                M +S  V + V +VND  P F   QY      + L +    G+ +  V A D D G
Sbjct: 1184 DLGPMRSSVRVIVYVEDVNDEAPVFTQQQYN----RLGLRETAGIGTSVIVVRATDKDTG 1239

Query: 177  DRVTLSLR--GPYEKMFSINDS-GHISIVDLSALNTSTIQLVVVATDTGNPP 225
            D   ++ R     E  F I++S G I  VD     T T  L+ V+   G PP
Sbjct: 1240 DGGLVNYRILSGAEGKFEIDESTGLIVTVDYLDYETKTSYLMNVSATDGAPP 1291



 Score = 38.1 bits (87), Expect = 7.1,   Method: Compositional matrix adjust.
 Identities = 62/217 (28%), Positives = 91/217 (41%), Gaps = 30/217 (13%)

Query: 25  RYALAT--------LIVSKAGTSLRELQFSKNEYSVSAL---ENLPVNYVLLTVTTNKPR 73
           RY+L T        ++V  +   +  L F  N +  + L   E+ PV     +VT    R
Sbjct: 2   RYSLVTCYAVLWLLMLVPGSWGQVNRLPFFTNHFFDTYLLISEDTPVGS---SVTQLLAR 58

Query: 74  DLR---VKYWLSNDYGERFSISR--QGDISLMQCLDYETEDSYRFTVYATDTLMTTSATV 128
           D+    + + +S +   RF       G + L Q LD ET+  +      +D     +  V
Sbjct: 59  DMDNDPLVFGVSGEEASRFFAVEPDTGVVWLRQPLDRETKSEFTVEFSVSDHQGVITRKV 118

Query: 129 NISVVNVNDWDPRFRYPQYELFLPHIPLADLTP-GSVIGKVEAADGD--KGDRVTLSLRG 185
           NI V +VND  P F    Y + +P     + TP G+ I  V A D D   G  V  S + 
Sbjct: 119 NIQVGDVNDNAPTFHNQPYSVRIP-----ENTPVGTPIFIVNATDPDLGAGGSVLYSFQP 173

Query: 186 PYEKMFSINDSGHISIV--DLSALNTSTIQLVVVATD 220
           P    F+I+ +  I  V  +L    T   QL V ATD
Sbjct: 174 P-SPFFAIDSARGIVTVIQELDYEVTQAYQLTVNATD 209



 Score = 38.1 bits (87), Expect = 7.5,   Method: Compositional matrix adjust.
 Identities = 61/285 (21%), Positives = 118/285 (41%), Gaps = 59/285 (20%)

Query: 4    EDDFL-QPITLVVRA----IQYDNQDRYALATLIVSK-----AGTSL-----RELQFSKN 48
            +D FL  P+T V+R     I  + Q+ Y L  +   +     +GT++      ++  S+ 
Sbjct: 2113 QDRFLIHPVTGVIRVGNATIDREEQESYRLTVVATDRGTVPLSGTAIVTILIDDINDSRP 2172

Query: 49   EY-----SVSALENLPVNYVLLTVTT-----NKPRDLRVKYWLSNDYGER--------FS 90
            E+     +VS LE+     ++  VT      N   +  +   ++ D  +R        F+
Sbjct: 2173 EFLNPIQTVSVLESAEPGTIIANVTAIDLDLNPKLEYHIISIVAKDDTDRLVPDQEDAFA 2232

Query: 91   IS-RQGDISLMQCLDYETEDSYRFTVYATD--------TLMTTSATVNISVVNVNDWDPR 141
            ++   G + +   L+ E   +Y  T+   D        ++   +A + +++++VND  P+
Sbjct: 2233 VNINTGSVMVKSPLNRELVATYEVTLSVIDNASDLPEHSVSVPNAKLTVNILDVNDNTPQ 2292

Query: 142  FRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSGHISI 201
            F+ P    +     L   TPG+ +  V A D DKG    ++       +  +   G++ +
Sbjct: 2293 FK-PFGITYYTERVLEGATPGTTLIAVAAVDPDKGLNGLITY-----TLLDLTPPGYVQL 2346

Query: 202  VDLSA-----------LNTSTIQLVVVATDTGNPPRQASVPAIMH 235
             D SA                +   V A+D G+PPR A +P  + 
Sbjct: 2347 EDSSAGKVIANRTVDYEEVHWLNFTVRASDNGSPPRAAEIPVYLE 2391


>gi|114050897|ref|NP_001004177.2| cadherin EGF LAG seven-pass G-type receptor 2 isoform 2 precursor
           [Mus musculus]
          Length = 2917

 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 67/219 (30%), Positives = 102/219 (46%), Gaps = 22/219 (10%)

Query: 25  RYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWL 81
           R ALATL +    T+  +  F + EY  S  ENL V Y +LTV     + P +  + Y L
Sbjct: 269 RSALATLTILVTDTNDHDPVFEQQEYKESLRENLEVGYEVLTVRATDGDAPPNANILYRL 328

Query: 82  SNDYG----ERFSIS-RQGDISLMQCLDYETEDSYRFTVYATDT-----LMTTSATVNIS 131
               G    + F I  R G I     +D E  +SY+ TV A+D        +++A V +S
Sbjct: 329 LEGAGGSPSDAFEIDPRSGVIRTRGPVDREEVESYKLTVEASDQGRDPGPRSSTAIVFLS 388

Query: 132 VVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYE 188
           V + ND  P+F   +Y + +      D+TPG+ + +V A+D DKG    +    + G   
Sbjct: 389 VEDDNDNAPQFSEKRYVVQV----REDVTPGAPVLRVTASDRDKGSNALVHYSIMSGNAR 444

Query: 189 KMFSIN-DSGHISIVD-LSALNTSTIQLVVVATDTGNPP 225
             F ++  +G + +V  L    T    L + A D G PP
Sbjct: 445 GQFYLDAQTGALDVVSPLDYETTKEYTLRIRAQDGGRPP 483



 Score = 52.0 bits (123), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 49/171 (28%), Positives = 80/171 (46%), Gaps = 15/171 (8%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGERFSIS---RQGDIS 98
           F    +  + LE++P+ Y++L V     +   + R++Y L+   G  F  +     G IS
Sbjct: 505 FVSTPFQATVLESVPLGYLVLHVQAIDADAGDNARLEYSLAG-VGHDFPFTINNGTGWIS 563

Query: 99  LMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIP 155
           +   LD E  D Y F V A D     +T SA+V++++++VND +P F  P+Y + L    
Sbjct: 564 VAAELDREEVDFYSFGVEARDHGTPALTASASVSVTILDVNDNNPTFTQPEYTVRLNE-- 621

Query: 156 LADLTPGSVIGKVEAADGDKGDRVTLSL-RGPYEKMFSINDSGHISIVDLS 205
             D   G+ +  V A D D    +T  +  G     FSI       +V L+
Sbjct: 622 --DAAVGTSVVTVSAVDRDAHSVITYQITSGNTRNRFSITSQSGGGLVSLA 670



 Score = 44.7 bits (104), Expect = 0.077,   Method: Compositional matrix adjust.
 Identities = 50/189 (26%), Positives = 86/189 (45%), Gaps = 14/189 (7%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRDLR--VKYWL-SNDYGERFSISRQ---GDIS 98
           F++ EY+V   E+  V   ++TV+    RD    + Y + S +   RFSI+ Q   G +S
Sbjct: 610 FTQPEYTVRLNEDAAVGTSVVTVSAVD-RDAHSVITYQITSGNTRNRFSITSQSGGGLVS 668

Query: 99  LMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLAD 158
           L   LDY+ E  Y   V A+D     +A + ++V + N   P F+   Y + +      D
Sbjct: 669 LALPLDYKLERQYVLAVTASDGTRQDTAQIVVNVTDANTHRPVFQSSHYTVNVNE----D 724

Query: 159 LTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSINDSGHISI-VDLSALNTSTIQLV 215
              G+ +  + A D D G+  R+T  +     +     D+G ++   +L   +  +  L 
Sbjct: 725 RPAGTTVVLISATDEDTGENARITYFMEDSIPQFRIDADTGAVTTQAELDYEDQVSYTLA 784

Query: 216 VVATDTGNP 224
           + A D G P
Sbjct: 785 ITARDNGIP 793



 Score = 44.7 bits (104), Expect = 0.087,   Method: Compositional matrix adjust.
 Identities = 40/149 (26%), Positives = 69/149 (46%), Gaps = 10/149 (6%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWL-SNDYGERFSIS-RQGDISL 99
            F ++E+ V   EN P+   +  VT   P +    ++ Y +   +  E F +    G+++ 
Sbjct: 921  FEQDEFDVFVEENSPIGLAVARVTATDPDEGTNAQIMYQIVEGNIPEVFQLDIFSGELTA 980

Query: 100  MQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPH--IPLA 157
            +  LDYE    Y   + AT   + + ATV++ +++ ND  P      +E+   +     +
Sbjct: 981  LVDLDYEDRPEYVLVIQATSAPLVSRATVHVRLLDRNDNPPVLG--NFEILFNNYVTNRS 1038

Query: 158  DLTPGSVIGKVEAADGDKGDRVTLSL-RG 185
               PG  IG+V A D D  D +T S  RG
Sbjct: 1039 SSFPGGAIGRVPAHDPDISDSLTYSFERG 1067


>gi|114050895|ref|NP_059088.2| cadherin EGF LAG seven-pass G-type receptor 2 isoform 1 precursor
           [Mus musculus]
 gi|148670020|gb|EDL01967.1| cadherin EGF LAG seven-pass G-type receptor 2 [Mus musculus]
 gi|225356528|gb|AAI56537.1| Cadherin, EGF LAG seven-pass G-type receptor 2 (flamingo homolog,
           Drosophila) [synthetic construct]
          Length = 2919

 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 67/219 (30%), Positives = 102/219 (46%), Gaps = 22/219 (10%)

Query: 25  RYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWL 81
           R ALATL +    T+  +  F + EY  S  ENL V Y +LTV     + P +  + Y L
Sbjct: 269 RSALATLTILVTDTNDHDPVFEQQEYKESLRENLEVGYEVLTVRATDGDAPPNANILYRL 328

Query: 82  SNDYG----ERFSIS-RQGDISLMQCLDYETEDSYRFTVYATDT-----LMTTSATVNIS 131
               G    + F I  R G I     +D E  +SY+ TV A+D        +++A V +S
Sbjct: 329 LEGAGGSPSDAFEIDPRSGVIRTRGPVDREEVESYKLTVEASDQGRDPGPRSSTAIVFLS 388

Query: 132 VVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYE 188
           V + ND  P+F   +Y + +      D+TPG+ + +V A+D DKG    +    + G   
Sbjct: 389 VEDDNDNAPQFSEKRYVVQV----REDVTPGAPVLRVTASDRDKGSNALVHYSIMSGNAR 444

Query: 189 KMFSIN-DSGHISIVD-LSALNTSTIQLVVVATDTGNPP 225
             F ++  +G + +V  L    T    L + A D G PP
Sbjct: 445 GQFYLDAQTGALDVVSPLDYETTKEYTLRIRAQDGGRPP 483



 Score = 52.0 bits (123), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 49/171 (28%), Positives = 80/171 (46%), Gaps = 15/171 (8%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGERFSIS---RQGDIS 98
           F    +  + LE++P+ Y++L V     +   + R++Y L+   G  F  +     G IS
Sbjct: 505 FVSTPFQATVLESVPLGYLVLHVQAIDADAGDNARLEYSLAG-VGHDFPFTINNGTGWIS 563

Query: 99  LMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIP 155
           +   LD E  D Y F V A D     +T SA+V++++++VND +P F  P+Y + L    
Sbjct: 564 VAAELDREEVDFYSFGVEARDHGTPALTASASVSVTILDVNDNNPTFTQPEYTVRLNE-- 621

Query: 156 LADLTPGSVIGKVEAADGDKGDRVTLSL-RGPYEKMFSINDSGHISIVDLS 205
             D   G+ +  V A D D    +T  +  G     FSI       +V L+
Sbjct: 622 --DAAVGTSVVTVSAVDRDAHSVITYQITSGNTRNRFSITSQSGGGLVSLA 670



 Score = 44.7 bits (104), Expect = 0.077,   Method: Compositional matrix adjust.
 Identities = 50/189 (26%), Positives = 86/189 (45%), Gaps = 14/189 (7%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRDLR--VKYWL-SNDYGERFSISRQ---GDIS 98
           F++ EY+V   E+  V   ++TV+    RD    + Y + S +   RFSI+ Q   G +S
Sbjct: 610 FTQPEYTVRLNEDAAVGTSVVTVSAVD-RDAHSVITYQITSGNTRNRFSITSQSGGGLVS 668

Query: 99  LMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLAD 158
           L   LDY+ E  Y   V A+D     +A + ++V + N   P F+   Y + +      D
Sbjct: 669 LALPLDYKLERQYVLAVTASDGTRQDTAQIVVNVTDANTHRPVFQSSHYTVNVNE----D 724

Query: 159 LTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSINDSGHISI-VDLSALNTSTIQLV 215
              G+ +  + A D D G+  R+T  +     +     D+G ++   +L   +  +  L 
Sbjct: 725 RPAGTTVVLISATDEDTGENARITYFMEDSIPQFRIDADTGAVTTQAELDYEDQVSYTLA 784

Query: 216 VVATDTGNP 224
           + A D G P
Sbjct: 785 ITARDNGIP 793



 Score = 44.7 bits (104), Expect = 0.086,   Method: Compositional matrix adjust.
 Identities = 40/149 (26%), Positives = 69/149 (46%), Gaps = 10/149 (6%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWL-SNDYGERFSIS-RQGDISL 99
            F ++E+ V   EN P+   +  VT   P +    ++ Y +   +  E F +    G+++ 
Sbjct: 921  FEQDEFDVFVEENSPIGLAVARVTATDPDEGTNAQIMYQIVEGNIPEVFQLDIFSGELTA 980

Query: 100  MQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPH--IPLA 157
            +  LDYE    Y   + AT   + + ATV++ +++ ND  P      +E+   +     +
Sbjct: 981  LVDLDYEDRPEYVLVIQATSAPLVSRATVHVRLLDRNDNPPVLG--NFEILFNNYVTNRS 1038

Query: 158  DLTPGSVIGKVEAADGDKGDRVTLSL-RG 185
               PG  IG+V A D D  D +T S  RG
Sbjct: 1039 SSFPGGAIGRVPAHDPDISDSLTYSFERG 1067


>gi|348524542|ref|XP_003449782.1| PREDICTED: protocadherin-23-like [Oreochromis niloticus]
          Length = 3262

 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 61/188 (32%), Positives = 96/188 (51%), Gaps = 16/188 (8%)

Query: 56   ENLPVNYVLLTVTTNKPRDLR--VKYWLSNDYGER--FSISR-QGDISLMQCLDYETEDS 110
            ENLP  Y++  VT N   DL   + Y  S++      F+I R  G I+L + LDYE +  
Sbjct: 2254 ENLPAGYMVTQVTAND-VDLSSTITYSFSDNSSTNIPFAIDRYTGVITLTRALDYEEQTE 2312

Query: 111  YRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEA 170
            Y  TV+A+D++  T+  V + V++VND  P F    Y++ L  +  AD    + +  V A
Sbjct: 2313 YTLTVWASDSIHQTNGEVKVQVLDVNDNAPVFTQDSYQVELSELVSAD----TFVMSVSA 2368

Query: 171  ADGDKGDRVTLSLR---GPYEKMFSINDSGHI-SIVDLSAL-NTSTIQLVVVATDTGNPP 225
             D D      +S R    P +  +   + G I +   L A+ N++ I L+V A D G+ P
Sbjct: 2369 TDRDSELNGKISYRLLSSPLQGFYIQPEDGSIFTNKPLKAITNSNLIHLLVEARDGGD-P 2427

Query: 226  RQASVPAI 233
             Q++V +I
Sbjct: 2428 VQSTVTSI 2435



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 57/176 (32%), Positives = 76/176 (43%), Gaps = 29/176 (16%)

Query: 93   RQGDISLMQCLDYETEDSYRFTVYATDTLM---TTSATVNISVVNVNDWDPRFRYPQYEL 149
            + G + L   LDYETE  Y F V AT+  +   T  ATV + V+++ND  P F    Y  
Sbjct: 1034 KTGWLYLSANLDYETESKYHFRVLATEAALSNTTAMATVTVLVLDINDNAPVFSRDVYYF 1093

Query: 150  FLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS-LRGPYEKMFSIN-DSGH-ISIVDLSA 206
             +    L   +P  ++G V+A D D G    LS L     K F IN  +G  I+ V L  
Sbjct: 1094 TV----LEGSSPQGLVGTVKAVDKDSGKNGQLSYLLLSDGKFFRINTKTGEIINWVALDR 1149

Query: 207  LNTSTIQLVVVATDTGNPPRQAS-------------VPAIMHFPEAIVQQASSKLN 249
               S   L V+ TD G+P   A+              P   H P      AS +LN
Sbjct: 1150 EQYSQHSLKVMVTDQGHPRLNATATVHILIADINDNAPQFTHLP------ASKELN 1199



 Score = 51.2 bits (121), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 57/206 (27%), Positives = 91/206 (44%), Gaps = 22/206 (10%)

Query: 87   ERFSIS-RQGDISLMQCLDYETEDSYRFTVYATDTL-MTTSATVNISVVNVNDWDPRFRY 144
            E F+I    GDI   Q  DYE E  Y F V A D      +  V +++  V+++ P F  
Sbjct: 2729 EAFAIDPLTGDIHTRQTFDYERESEYCFIVEARDKGDKAATVRVQVNIKGVDEFSPVFTQ 2788

Query: 145  PQYELFLPHIPLADLTPGSVIGKVEAADGDKG-DRV---TLSLRGPYEKMFSINDS-GHI 199
             QY   LP     ++ PG  +G V A D D G D V   +L    P+   FSIN + G I
Sbjct: 2789 KQYHFLLPE----NIKPGDTVGYVMAMDHDGGVDGVVEYSLVNSSPF---FSINRTIGAI 2841

Query: 200  SI---VDLSALNTSTIQLVVVATDTGNPPRQASVPAIMHFPEAIVQQASSKLNSGTSSTV 256
             +   V   A +   ++LV+ A       R  +    ++     +  ++  L      T 
Sbjct: 2842 FVSGPVYRRAGSQDIVELVISAASPRLGSRTTTCLVFVN-----ISSSAEALTGVPLDTH 2896

Query: 257  LIILGVVLIVLGFVIILLILYIHKNK 282
            ++ L V LI+  F++I+ +  + + K
Sbjct: 2897 MLSLTVSLIMFLFLLIIFVSLVLRCK 2922



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 56/200 (28%), Positives = 91/200 (45%), Gaps = 27/200 (13%)

Query: 43   LQFSKNEYSVSALENLPVNYVLLTVTTNKPRD--LRVKYWL-SNDYGERFSISRQ-GDIS 98
            LQF+   Y+ S  EN      +  V  N+      R+ Y + S +  + FSI+R  G+I 
Sbjct: 2034 LQFTSKVYNASVKENSRAGTWIAKVEANEQSSSRQRITYTIFSGNENQVFSINRHTGEIR 2093

Query: 99   LMQ--CLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
            + +   LD+E     +  V A   L T    V+I++V++ND  P+F +  Y   +    +
Sbjct: 2094 VQKDNSLDFEVNPHIQLVVLADSGLQTAHCRVSITLVDINDNAPQFEHSSYRTAVWEGQV 2153

Query: 157  ADLTPGSVIGKVEAADGDKGDRVTLSLRGPYE-KMFSINDSGHI---SIVDLSALN---- 208
             +    + I +V A+D D G      + G  E  + S N +G     S+  + A N    
Sbjct: 2154 HN----TYIMQVFASDADSG------MNGQIEYSILSGNLNGAFILDSVRGILATNVLLD 2203

Query: 209  ---TSTIQLVVVATDTGNPP 225
               T + +LV+ A D GNPP
Sbjct: 2204 REITPSYKLVLQAADRGNPP 2223



 Score = 47.8 bits (112), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 65/226 (28%), Positives = 97/226 (42%), Gaps = 18/226 (7%)

Query: 13   LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENL-PVNYVLLTVTTNK 71
            L VRA+        +  TL V     + +   FS+  Y+ +  EN  P   V+    T++
Sbjct: 1588 LTVRALDQGLPSLSSTQTLTVEVGDVNDQAPVFSQAIYTATVAENRDPGEPVIRVSATDE 1647

Query: 72   PRDLRVKYWLSNDYG---ERFSIS-RQGDISLMQCLDYETEDSYRFTVYATDTL---MTT 124
              +     W S   G   E FSI+   G I+    LD E +  +   V A D+    +++
Sbjct: 1648 DSEENAVVWYSLLPGPGYELFSINPYTGLITTTSYLDREQQQHFTLRVQARDSSARPLSS 1707

Query: 125  SATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS-- 182
            + TV  SV++ ND  P F    + + LP     +L PG VI   +A+D D G+  T+   
Sbjct: 1708 TTTVMCSVLDDNDNPPEFMQSSFRISLPE----NLAPG-VIHTAQASDPDHGENGTIHYS 1762

Query: 183  -LRGPYEKMFSIND-SGHISIVD-LSALNTSTIQLVVVATDTGNPP 225
             L   Y   F+IN  +G IS    L    T    L + A D G  P
Sbjct: 1763 ILGEDYRGRFTINSHTGAISTTQVLDREETQNYTLTIQARDYGPTP 1808



 Score = 44.7 bits (104), Expect = 0.074,   Method: Compositional matrix adjust.
 Identities = 54/202 (26%), Positives = 93/202 (46%), Gaps = 27/202 (13%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRDL----RVKYWLS---NDYGERFSISRQ-GD 96
           F++ EY  S  E+ P+   +  V      DL    R+ Y ++   +D  E FSI+   G 
Sbjct: 235 FNQTEYHTSVREDAPIMSAVCQVQATD-YDLGDNGRLTYEINRRQSDPSEVFSINETTGV 293

Query: 97  ISLMQCLDYETEDSYRFTVYATDTLMT---TSATVNISVVNVNDWDPRFRYPQYELFLPH 153
           + L + LD+ET+  +   + A D  +    +S  V + V+N+ND  P        LFL  
Sbjct: 294 VYLNKPLDFETQAFHELIINARDNGVQPEYSSTFVGVRVLNINDNSPTISV----LFLSD 349

Query: 154 IPLADLTPGSVIG----KVEAADGD-KGDRVTLSLRGPYEKMFSINDSGHISIV-----D 203
              A ++  + +G    ++  +D D +G+R+T++L G   K F++  +           +
Sbjct: 350 TGDAVVSESAAVGDYVARISVSDPDLEGERITVTLEGGDGK-FTLKQTDDFLYALCVNSE 408

Query: 204 LSALNTSTIQLVVVATDTGNPP 225
           L        +L V A+D GNPP
Sbjct: 409 LDREEKDLYELKVQASDFGNPP 430



 Score = 42.0 bits (97), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 34/108 (31%), Positives = 52/108 (48%), Gaps = 10/108 (9%)

Query: 93   RQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYEL 149
            + G + L   LDYETE  +R TV A D     ++++ T+ + V +VND  P F    Y  
Sbjct: 1568 KTGLLLLTAPLDYETERFHRLTVRALDQGLPSLSSTQTLTVEVGDVNDQAPVFSQAIYTA 1627

Query: 150  FLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN 194
             +      +  PG  + +V A D D  +   +    L GP  ++FSIN
Sbjct: 1628 TVAE----NRDPGEPVIRVSATDEDSEENAVVWYSLLPGPGYELFSIN 1671



 Score = 39.7 bits (91), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 42/159 (26%), Positives = 72/159 (45%), Gaps = 25/159 (15%)

Query: 38   TSLRELQFSKNEYSVSALENLPVNYVLLTVTTN----KPRDLRVKYWLSNDYGE-RFS-- 90
            T+  E  F ++ Y+++  E+ P++  LLT++       P +  + Y ++    E RF   
Sbjct: 2442 TNDHEPSFYQDIYTLTVPEDTPIDTTLLTLSAEDQDWSPENTYLDYTITRGNEEKRFCLE 2501

Query: 91   ---------ISRQGDISLMQCLDYETEDSYRFTVYATDTLM---TTSATVNISVVNVNDW 138
                     I   G + L   LD ET +SY  TV  +D  M    +S  V ++V + ND 
Sbjct: 2502 VKMVQIENQIKNVGKLVLCNALDRETTESYALTVSVSDRGMPPLNSSTVVMVTVTDCNDN 2561

Query: 139  DPRFRYPQYELFLPHIPLADLTP-GSVIGKVEAADGDKG 176
             P F   +Y     H  +++ +  G+ + +V A D D G
Sbjct: 2562 APVFSSTEY-----HAQVSENSQLGTKLVQVSAHDPDLG 2595


>gi|443734675|gb|ELU18572.1| hypothetical protein CAPTEDRAFT_176056 [Capitella teleta]
          Length = 964

 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 69/251 (27%), Positives = 122/251 (48%), Gaps = 23/251 (9%)

Query: 44  QFSKNEYSVSALENLPVN-YVLLTVTTNKPRDLRVKYWLSNDYGER----FSIS-RQGDI 97
           +F K  YS+   EN P+   V +    +K  +L  ++    DY E+    F+I    G I
Sbjct: 560 RFEKPVYSLGVFENQPIQTEVGIVEAYDKDSELFNRFHYELDYNEQDANAFTIDPDSGHI 619

Query: 98  SLMQCLDYETEDSYRFTVYA-TDTLMTTS--ATVNISVVNVNDWDPRFRYPQYELFLPHI 154
              + LD ET+  Y FTV A ++ L   S  A V++ + + ND  P   +P ++    HI
Sbjct: 620 YTSEVLDRETKADYHFTVSAISEGLHPKSDIAAVHVYIADTNDNAPMIHFPNFKNNTIHI 679

Query: 155 PLADLTP-GSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSINDSGHISIV--DLSALN 208
             ++ TP  +V+  VEA D D      +S   + G  ++ F I+ +  + I+  ++S ++
Sbjct: 680 --SNRTPLSTVLTTVEAEDVDANSNARISFAIVSGNVQEHFDIDANTGVLILAKEVSKID 737

Query: 209 TSTIQLVVVATDTGNPPRQASVPAIMHFPEAIVQQASSKLNSG-TSSTVLIILGVVLIVL 267
                LV+   D G+PPR +       F   IV ++ +  ++G  SS  L I+  +  V 
Sbjct: 738 HRLFGLVISVKDHGDPPRASEA-----FLNIIVNKSITSPSTGLMSSHNLTIVIAIATVS 792

Query: 268 GFVIILLILYI 278
           G ++++L++ I
Sbjct: 793 GLLMVVLLVGI 803



 Score = 43.9 bits (102), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 32/82 (39%), Positives = 41/82 (50%), Gaps = 5/82 (6%)

Query: 97  ISLMQCLDYETEDSYRFTVYATDT-LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIP 155
           +SL + LD ET +SYR  V A      +   TV I V +VND  P F    Y+  +    
Sbjct: 194 LSLKEKLDRETSESYRVVVEANGVDGRSGRMTVVIEVQDVNDNLPNFEKQNYDFEITE-- 251

Query: 156 LADLTPGSVIGKVEAADGDKGD 177
             D+  G +IG V AAD D GD
Sbjct: 252 --DVDEGFIIGSVVAADLDSGD 271



 Score = 42.0 bits (97), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 54/177 (30%), Positives = 80/177 (45%), Gaps = 30/177 (16%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLR---VKYWL---SNDYGERFSISRQGDI 97
           +F K+ YS S LEN  V   L++V    P +     V+Y L   SN +      +  G+I
Sbjct: 452 RFGKSMYSGSLLENNHVGVFLVSVQAMDPDEGSNGTVRYALDAESNTHNLLRIDASSGNI 511

Query: 98  SLMQCLDYETEDSYRFTVY--ATDT---LMTTSATVNISVVNVNDWDPRFRYPQYEL-FL 151
           +     D+E     R  V   A D    + +++ +V ISV++++D  PRF  P Y L   
Sbjct: 512 TANVPFDHELSHHRRIEVQVIARDQGTPVQSSTVSVIISVIDIDDERPRFEKPVYSLGVF 571

Query: 152 PHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYE--------KMFSIN-DSGHI 199
            + P+      + +G VEA D D      L  R  YE          F+I+ DSGHI
Sbjct: 572 ENQPIQ-----TEVGIVEAYDKDS----ELFNRFHYELDYNEQDANAFTIDPDSGHI 619


>gi|60417436|emb|CAI59610.1| cadherin 23 [Mus musculus]
          Length = 3267

 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 60/195 (30%), Positives = 92/195 (47%), Gaps = 20/195 (10%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWLSNDYGERFSIS-RQGDISLM 100
            F +  Y  +  E++ V  V+L VT           ++Y L +  G +F+I+   GDIS++
Sbjct: 2400 FDQPSYQEAVFEDIAVGTVILRVTATDADSGNFALIEYSLVDGEG-KFAINPNTGDISVL 2458

Query: 101  QCLDYETEDSYRFTVYATDT-------LMTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
              LD E +D Y  T  A D            S  V I V++VND  P+F  PQ+   +  
Sbjct: 2459 SSLDREKKDHYILTALAKDNPGDVASNRRENSVQVVIRVLDVNDCRPQFSKPQFSTSV-- 2516

Query: 154  IPLADLTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSIN-DSGHISIVDLSALNTS 210
                +   G+ +  + A D D+G   ++T SL GP  + FS++ DSG ++       +  
Sbjct: 2517 --YENEPAGTSVITMLATDQDEGSNSQLTYSLEGPGMEAFSVDMDSGLVT-TQRPLQSYE 2573

Query: 211  TIQLVVVATDTGNPP 225
               L VVATD G PP
Sbjct: 2574 RFNLTVVATDGGEPP 2588



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 67/217 (30%), Positives = 98/217 (45%), Gaps = 42/217 (19%)

Query: 45  FSKNEYSVSALENLPVNY-VLLTVTTNKPRDLRVKYWLSNDYGE-----------RFSI- 91
           FSK  Y VS LEN+     VL    T+  R        S +YG+           +F I 
Sbjct: 669 FSKPAYFVSVLENIMAGATVLFLNATDLDR--------SREYGQESIIYSLEGSSQFRIN 720

Query: 92  SRQGDISLMQCLDYETEDSYRFTVYATD-----TLMTTSATVNISVVNVNDWDPRFRYPQ 146
           +R G+I+    LD ET+  Y   V A D        T  ATVN++++++ND  P ++   
Sbjct: 721 ARSGEITTTSLLDRETKSEYILIVRAVDGGVGHNQKTGIATVNVTLLDINDNHPTWKDAP 780

Query: 147 YELFLPHIPLADLT-PGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSIND-SGHISI-- 201
           Y     +I L ++T P S +  V A D D G+  TL     P  K +S+N  +G I    
Sbjct: 781 Y-----YINLVEMTPPDSDVTTVVAVDPDLGENGTLVYSIHPPNKFYSLNSTTGKIRTTH 835

Query: 202 VDLSALNTSTIQ------LVVVATDTGNPPRQASVPA 232
           V L   N   ++      ++V  TD G PP +A+  A
Sbjct: 836 VMLDRENPDPVEAELMRKIIVSVTDCGRPPLKATSSA 872



 Score = 52.4 bits (124), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 65/210 (30%), Positives = 94/210 (44%), Gaps = 28/210 (13%)

Query: 45  FSKNEYSVSALENLPVNYVLLTV--TTNKPRDL-RVKYWLSNDYGERFSISRQ-GDISLM 100
           FS+  Y+VS  EN+ V   +LTV  T N       V Y+ S+D  +RFS+ +  G I L+
Sbjct: 458 FSQPLYNVSLYENITVGTSVLTVLATDNDVGTFGEVNYFFSDD-PDRFSLDKDTGLIMLI 516

Query: 101 QCLDYETEDSYRFTVYATDTL-MTTSATVNISVVNVNDWDPRFRYPQYELFL----PHIP 155
             LDYE    +  TV A D     T+  V I+V++VND  P F+   Y   L    P + 
Sbjct: 517 ARLDYELIQRFTLTVIARDGGGEETTGRVRINVLDVNDNVPTFQKDAYVGALRENEPSV- 575

Query: 156 LADLTPGSVIGKVEAADGDKGDR-------VTLSLRGPYEKMFSINDSGHISI---VDLS 205
                  + + ++ A D D           V  S  G Y  +      G IS+   +D  
Sbjct: 576 -------TQLVRLRATDEDSPPNNLITYSIVNASAFGSYFDISIYEGYGVISVSRPLDYE 628

Query: 206 ALNTSTIQLVVVATDTGNPPRQASVPAIMH 235
            +    I L V+A D GNPP  ++VP  + 
Sbjct: 629 QIPNGLIYLTVMAKDAGNPPLYSTVPVTIE 658



 Score = 45.8 bits (107), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 45/142 (31%), Positives = 68/142 (47%), Gaps = 20/142 (14%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVT-TNKPRDL--RVKYWLSNDYGERFSIS------RQG 95
            FS   Y+V  LEN P  + +L VT T++   L   + Y +     +RF I       R G
Sbjct: 2067 FSPPTYTVHLLENCPPGFSVLQVTATDEDSGLNGELVYRIEAGAQDRFLIHPVTGVIRVG 2126

Query: 96   DISLMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLP 152
            + +    +D E ++SYR TV ATD     ++ +A V I + ++ND  P F  P   + + 
Sbjct: 2127 NAT----IDREEQESYRLTVVATDRGTVPLSGTAIVTILIDDINDSRPEFLNPIQTVSV- 2181

Query: 153  HIPLADLTPGSVIGKVEAADGD 174
               L    PG++I  V A D D
Sbjct: 2182 ---LESAEPGTIIANVTAIDLD 2200



 Score = 45.8 bits (107), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 57/203 (28%), Positives = 87/203 (42%), Gaps = 23/203 (11%)

Query: 43   LQFSKNEYSVSALENLPVNYVLLTVTTNKPRDL-----RVKYWLSNDYGERFSISR-QGD 96
            +QFS   Y    +ENL +   ++ V      +L     R   + S      F I    G 
Sbjct: 1309 VQFSNASYEAVIMENLALGTEIVRVQAYSIDNLNQITYRFDAYTSAQAKALFKIDAITGV 1368

Query: 97   ISLMQCLDYETEDSYRFTVYATDTLMTTSATVN--ISVVNVNDWDPRFRYPQYELFLPHI 154
            I++   +D E  D Y  TV A D      +TV   I+V++ ND  PRF +         +
Sbjct: 1369 ITVKGLVDREKGDFYTLTVVADDGGPKVDSTVKVYITVLDENDNSPRFDFTSDSAI--SV 1426

Query: 155  PLADLTPGSVIGKVEAADGDKGD--RVTLSLR-----GPYEKMFSINDSGHISI---VDL 204
            P  D   G  +  V+A D D G   +V  SL      G +E + S +  G + +   +D 
Sbjct: 1427 P-EDCPVGQRVATVKARDPDAGSNGQVVFSLASGNIAGAFEIITSNDSIGEVFVAKPLDR 1485

Query: 205  SALNTSTIQLVVVATDTGNPPRQ 227
              L+   ++  VVA+D G PPR+
Sbjct: 1486 EELDHYILK--VVASDRGTPPRK 1506



 Score = 43.9 bits (102), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 53/197 (26%), Positives = 88/197 (44%), Gaps = 24/197 (12%)

Query: 44  QFSKNEYSVSALENLPVNYVL----LTVTTNKPRDLRVKYWLSNDYGERF-----SISRQ 94
           +F+ +EYSV+  E   V + L      V  ++  +   + +L  +    F     S+  +
Sbjct: 347 EFNSSEYSVAITELAQVGFALPLFIQVVDKDEGLNSMFEVYLVGNNSHHFIISPTSVQGK 406

Query: 95  GDISLMQC--LDYETEDSYRFTVYATDTL--MTTSATVNISVVNVNDWDPRFRYPQYELF 150
            DI +     LDYET D Y F ++A +++      A V I+++N ND  P F  P Y + 
Sbjct: 407 ADIRIRVAIPLDYETVDRYDFDLFANESVPDHVGYAKVKITLINENDNRPIFSQPLYNVS 466

Query: 151 LPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDSGHISIVDLSALN 208
           L      ++T G+ +  V A D D G    V        ++     D+G I ++  + L+
Sbjct: 467 L----YENITVGTSVLTVLATDNDVGTFGEVNYFFSDDPDRFSLDKDTGLIMLI--ARLD 520

Query: 209 TSTIQ---LVVVATDTG 222
              IQ   L V+A D G
Sbjct: 521 YELIQRFTLTVIARDGG 537



 Score = 42.7 bits (99), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 40/137 (29%), Positives = 64/137 (46%), Gaps = 29/137 (21%)

Query: 65   LTVTTNKPRDLRVKYWLS---NDYG---------------ERFSIS-RQGDISLMQCLDY 105
            ++V+ + PR+ RV  WL+   ND G                +FS+  R   +  +  LD 
Sbjct: 1000 VSVSEDVPREFRV-VWLNCTDNDVGLNAELSYFITAGNVDGKFSVGYRDAVVRTVVGLDR 1058

Query: 106  ETEDSYRFTVYATDT-----LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLT 160
            ET  +Y   + A D        T +ATV ++V++VND  P F    YE  +P     D+ 
Sbjct: 1059 ETTAAYTLVLEAIDNGPVGKRRTGTATVFVTVLDVNDNRPIFLQSSYEASVPE----DIP 1114

Query: 161  PGSVIGKVEAADGDKGD 177
             G  I +++A D D+G+
Sbjct: 1115 EGHSIVQLKATDADEGE 1131



 Score = 41.6 bits (96), Expect = 0.64,   Method: Compositional matrix adjust.
 Identities = 39/124 (31%), Positives = 62/124 (50%), Gaps = 15/124 (12%)

Query: 92   SRQGDISLMQCLDYETEDSYRFTVYATDTLMTTSAT---VNISVVNVNDWDPRFRYPQYE 148
            S  G +   + +DYE      FTV A+D      A    V + +V++ND +P F  P Y+
Sbjct: 2347 SSAGKVIANRTVDYEEVHWLNFTVRASDNGSPPRAAEIPVYLEIVDINDNNPIFDQPSYQ 2406

Query: 149  LFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-DSGHISIVDL 204
              +      D+  G+VI +V A D D G+   +    + G  E  F+IN ++G IS+  L
Sbjct: 2407 EAV----FEDIAVGTVILRVTATDADSGNFALIEYSLVDG--EGKFAINPNTGDISV--L 2458

Query: 205  SALN 208
            S+L+
Sbjct: 2459 SSLD 2462



 Score = 38.9 bits (89), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 66/232 (28%), Positives = 99/232 (42%), Gaps = 25/232 (10%)

Query: 12   TLVVRAIQYDN----QDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTV 67
            TLV+ AI  DN    + R   AT+ V+    +     F ++ Y  S  E++P  + ++ +
Sbjct: 1065 TLVLEAI--DNGPVGKRRTGTATVFVTVLDVNDNRPIFLQSSYEASVPEDIPEGHSIVQL 1122

Query: 68   -TTNKPRDLRVKYW---LSNDYGERFSISRQGDISLMQC---LDYETEDSYRFTVYATD- 119
              T+       + W   L  ++G  F I   G   LM+    LD E   S+   V A + 
Sbjct: 1123 KATDADEGEFGRVWYRILHGNHGNNFRI-HVGSGLLMRGPRPLDRERNSSHVLMVEAYNH 1181

Query: 120  --TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTP-GSVIGKVEAADGDKG 176
                M +S  V + V +VND  P F   QY      + L +    G+ +  V A D D G
Sbjct: 1182 DLGPMRSSVRVIVYVEDVNDEAPVFTQQQYN----RLGLRETAGIGTSVIVVRATDKDTG 1237

Query: 177  DRVTLSLR--GPYEKMFSINDS-GHISIVDLSALNTSTIQLVVVATDTGNPP 225
            D   ++ R     E  F I++S G I  VD     T T  L+ V+   G PP
Sbjct: 1238 DGGLVNYRILSGAEGKFEIDESTGLIVTVDYLDYETKTSYLMNVSATDGAPP 1289



 Score = 38.5 bits (88), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 62/217 (28%), Positives = 91/217 (41%), Gaps = 30/217 (13%)

Query: 25  RYALAT--------LIVSKAGTSLRELQFSKNEYSVSAL---ENLPVNYVLLTVTTNKPR 73
           RY+L T        ++V  +   +  L F  N +  + L   E+ PV     +VT    R
Sbjct: 2   RYSLVTCYAVLWLLMLVPGSWGQVNRLPFFTNHFFDTYLLISEDTPVGS---SVTQLLAR 58

Query: 74  DLR---VKYWLSNDYGERFSISR--QGDISLMQCLDYETEDSYRFTVYATDTLMTTSATV 128
           D+    + + +S +   RF       G + L Q LD ET+  +      +D     +  V
Sbjct: 59  DMDNDPLVFGVSGEEASRFFAVEPDTGVVWLRQPLDRETKSEFTVEFSVSDHQGVITRKV 118

Query: 129 NISVVNVNDWDPRFRYPQYELFLPHIPLADLTP-GSVIGKVEAADGD--KGDRVTLSLRG 185
           NI V +VND  P F    Y + +P     + TP G+ I  V A D D   G  V  S + 
Sbjct: 119 NIQVGDVNDNAPTFHNQPYSVRIP-----ENTPVGTPIFIVNATDPDLGAGGSVLYSFQP 173

Query: 186 PYEKMFSINDSGHISIV--DLSALNTSTIQLVVVATD 220
           P    F+I+ +  I  V  +L    T   QL V ATD
Sbjct: 174 P-SPFFAIDSARGIVTVIQELDYEVTQAYQLTVNATD 209



 Score = 38.1 bits (87), Expect = 6.5,   Method: Compositional matrix adjust.
 Identities = 61/285 (21%), Positives = 118/285 (41%), Gaps = 59/285 (20%)

Query: 4    EDDFL-QPITLVVRA----IQYDNQDRYALATLIVSK-----AGTSL-----RELQFSKN 48
            +D FL  P+T V+R     I  + Q+ Y L  +   +     +GT++      ++  S+ 
Sbjct: 2111 QDRFLIHPVTGVIRVGNATIDREEQESYRLTVVATDRGTVPLSGTAIVTILIDDINDSRP 2170

Query: 49   EY-----SVSALENLPVNYVLLTVTT-----NKPRDLRVKYWLSNDYGER--------FS 90
            E+     +VS LE+     ++  VT      N   +  +   ++ D  +R        F+
Sbjct: 2171 EFLNPIQTVSVLESAEPGTIIANVTAIDLDLNPKLEYHIISIVAKDDTDRLVPDQEDAFA 2230

Query: 91   IS-RQGDISLMQCLDYETEDSYRFTVYATD--------TLMTTSATVNISVVNVNDWDPR 141
            ++   G + +   L+ E   +Y  T+   D        ++   +A + +++++VND  P+
Sbjct: 2231 VNINTGSVMVKSPLNRELVATYEVTLSVIDNASDLPEHSVSVPNAKLTVNILDVNDNTPQ 2290

Query: 142  FRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSGHISI 201
            F+ P    +     L   TPG+ +  V A D DKG    ++       +  +   G++ +
Sbjct: 2291 FK-PFGITYYTERVLEGATPGTTLIAVAAVDPDKGLNGLITY-----TLLDLTPPGYVQL 2344

Query: 202  VDLSA-----------LNTSTIQLVVVATDTGNPPRQASVPAIMH 235
             D SA                +   V A+D G+PPR A +P  + 
Sbjct: 2345 EDSSAGKVIANRTVDYEEVHWLNFTVRASDNGSPPRAAEIPVYLE 2389


>gi|292618218|ref|XP_001921284.2| PREDICTED: protocadherin-16 [Danio rerio]
          Length = 3260

 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 60/187 (32%), Positives = 98/187 (52%), Gaps = 18/187 (9%)

Query: 51   SVSALENLPVNYVLLTVT---TNKPRDLRVKYWL-SNDYGERFSI-SRQGDISLMQCLDY 105
            +VS +E+ PV +VLL V     ++  + RV Y + S +   RF + S  G +S+++ LD 
Sbjct: 1511 AVSVMEDQPVGFVLLYVMAWDADQGENGRVSYRIQSGNTAGRFVLSSNSGSLSILKPLDR 1570

Query: 106  ETEDSYRFTVYATDTLM---TTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPG 162
            E ++SY  T+ A D  +   +T+  ++I V++VND  P F   ++E  +     A    G
Sbjct: 1571 EEQESYNLTIVAEDHGIPQHSTTQVLSIQVIDVNDEAPWFERNEFEAQIRENQPA----G 1626

Query: 163  SVIGKVEAADGDKGDRVTLSLRGPYEKMFSIN-DSGHIS---IVDLSALNTSTIQLVVVA 218
            + I +V A+D D G    ++  G  E  F+IN ++G IS   ++D    +  TI   V A
Sbjct: 1627 TSIIQVTASDRDHGTNGLVTYGGVTEDGFTINAETGVISATRVLDRELQDHYTI--TVYA 1684

Query: 219  TDTGNPP 225
             D G PP
Sbjct: 1685 KDGGIPP 1691



 Score = 58.9 bits (141), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 52/142 (36%), Positives = 71/142 (50%), Gaps = 11/142 (7%)

Query: 95   GDISLMQCLDYETEDSYRFTVYATDTL----MTTSATVNISVVNVNDWDPRFRYPQYELF 150
            G + +   LD E +D Y  TV AT        T SAT+ +SV + ND  PRF   Q  +F
Sbjct: 1025 GWLFVKSALDREVKDIYLLTVLATSGSGQMGRTGSATIRVSVTDENDNAPRFS--QERVF 1082

Query: 151  LPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPY-EKMFSIN-DSGHISI-VDLSAL 207
            L      +L  G+  G+V A D D G    L+ R  + ++ F IN  +G IS    L   
Sbjct: 1083 L--AVRENLPAGTGFGRVSATDRDAGLNSRLTYRLLHTDRYFQINSQTGEISTRAALDRE 1140

Query: 208  NTSTIQLVVVATDTGNPPRQAS 229
            + S+ QL+VV  D G PPR A+
Sbjct: 1141 HQSSYQLMVVVQDGGTPPRSAT 1162



 Score = 55.1 bits (131), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 57/216 (26%), Positives = 100/216 (46%), Gaps = 34/216 (15%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGERFSIS-RQGDISL 99
            +FS + Y+V   E+  +  V+L  T    ++ ++ ++ Y+LS +    F++    G I+ 
Sbjct: 1815 KFSSSSYTVDVSEDAAIGLVVLDATATDVDEGQNGQILYFLSQEAKGAFTVDPNTGRITT 1874

Query: 100  MQCLDYETEDSYRFTVYATD----TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIP 155
               LD E   SY F VYA D        ++A V +++++VND  P         F+    
Sbjct: 1875 AALLDREKRASYFFQVYAVDLSPAAPRNSTAQVTVTILDVNDNAP--------FFIQDPL 1926

Query: 156  LADLTPGSV-----IGKVEAADGDKGD------RVTLSLRGPYEKMFSIND-SGHISIVD 203
            + +++ GSV     +  + A D D G       R  + +RG     F+IN  +G I   +
Sbjct: 1927 IINVSSGSVFTHQVVATMRAEDKDFGANGSVFYRFAMPVRG-----FAINSLTGAIQTTE 1981

Query: 204  -LSALNTSTIQLVVVATDTGNPPRQASVPAIMHFPE 238
             L  L  +   L+V A D G+PP+ +    I++  E
Sbjct: 1982 NLQTLTQTQRTLIVEAMDQGSPPQSSLGVVIIYVKE 2017



 Score = 54.3 bits (129), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 63/221 (28%), Positives = 104/221 (47%), Gaps = 20/221 (9%)

Query: 25   RYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVT-TNKPRDL--RVKYWL 81
            R   AT+ VS    +    +FS+    ++  ENLP       V+ T++   L  R+ Y L
Sbjct: 1056 RTGSATIRVSVTDENDNAPRFSQERVFLAVRENLPAGTGFGRVSATDRDAGLNSRLTYRL 1115

Query: 82   --SNDYGERFSISRQ-GDISLMQCLDYETEDSYRFTVYATDTLM---TTSATVNISVVNV 135
              ++ Y   F I+ Q G+IS    LD E + SY+  V   D      + + T +I+V++ 
Sbjct: 1116 LHTDRY---FQINSQTGEISTRAALDREHQSSYQLMVVVQDGGTPPRSATGTAHITVLDE 1172

Query: 136  NDWDPRFRY--PQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTL--SLRGPYEKMF 191
            ND  P F +  P  E+ +       L  GS++G + A D D+G+  T+  SL G   + F
Sbjct: 1173 NDNAPAFSHTQPGREILIQ--VQEGLPAGSLLGTLNAKDPDEGENGTIFYSLSGSRAERF 1230

Query: 192  SIN-DSGHI-SIVDLSALNTSTIQLVVVATDTGNPPRQASV 230
            S+N ++G + S   L     +     + A+D G P + +S 
Sbjct: 1231 SLNPNTGELRSSSPLRRAEKAEYSFTITASDRGAPSQSSSA 1271



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 59/193 (30%), Positives = 90/193 (46%), Gaps = 21/193 (10%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYG----ERFSISRQ-GDISL 99
            F +NE+     EN P    ++ VT +  RD      ++  YG    + F+I+ + G IS 
Sbjct: 1610 FERNEFEAQIRENQPAGTSIIQVTASD-RDHGTNGLVT--YGGVTEDGFTINAETGVISA 1666

Query: 100  MQCLDYETEDSYRFTVYATDTLMT---TSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
             + LD E +D Y  TVYA D  +      A V+I+V++ ND  P F   QY L +P    
Sbjct: 1667 TRVLDRELQDHYTITVYAKDGGIPPNFAKAKVHITVLDENDNAPAFGLQQYSLEVPE--- 1723

Query: 157  ADLTPGSVIGKVEAADGDKGDRVTLSLR---GPYEKMFSIN-DSGHISIVD-LSALNTST 211
             +L P  +   ++A D D G+   L  +   G  +  F ++  SG +S    L     S+
Sbjct: 1724 -NLQPVELF-TLKATDRDIGESGRLEYKIKAGDPDGDFRLDGSSGALSTSRPLDRERKSS 1781

Query: 212  IQLVVVATDTGNP 224
              L VV  D G+P
Sbjct: 1782 YSLQVVVQDHGSP 1794



 Score = 48.9 bits (115), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 45/140 (32%), Positives = 65/140 (46%), Gaps = 16/140 (11%)

Query: 97  ISLMQCLDYETEDSYRFTVYATDTL---MTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
           I + Q LD E  DSY   V ATD+    +   ++  I V +VND  P F    Y+  +P 
Sbjct: 387 IYVDQILDREERDSYELRVMATDSGTPPLHAESSFTIHVTDVNDNPPLFDQQAYKQTIPE 446

Query: 154 IPLADLTPGSVIGKVEAADGDKGDR-----VTLSLRGPYEKMFSINDSGHISIVDLSALN 208
           +    + PGS + +V A D D+G         L  +  +   F+I+    I I   + L+
Sbjct: 447 V----VYPGSFVLQVTARDKDQGPNGDIRYSILPDKKTHSSWFTIDPVTGI-ITTATKLD 501

Query: 209 TSTI---QLVVVATDTGNPP 225
             TI    + VVATD G PP
Sbjct: 502 YETIPKPSIKVVATDGGRPP 521



 Score = 48.1 bits (113), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 61/225 (27%), Positives = 100/225 (44%), Gaps = 17/225 (7%)

Query: 12   TLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNK 71
            TL+V A+   +  + +L  +I+       + ++FS+    VS  EN     V+       
Sbjct: 1992 TLIVEAMDQGSPPQSSLGVVIIYVKEQDYKGIRFSRTARDVSLQENADKGTVVAQAQAQH 2051

Query: 72   PRDLR--VKY--WLSNDYGERFSISRQ-GDISLMQC--LDYETEDSYRFTVYATDTLMTT 124
            P   R  + Y  +  N Y   FSIS   G+I +     LD+E     R  V A  T  ++
Sbjct: 2052 PDGTRDGINYSIFSGNKY-HSFSISSNTGEIWVQSSNGLDFEDTPRLRLVVKAETTSSSS 2110

Query: 125  SATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGD--RVTLS 182
               VN+ + +VND  PRF+   Y  ++      D      I +V A D D+G   +VT +
Sbjct: 2111 FMAVNLILQDVNDNRPRFQLQNYVTYMHEAQGYDFP----IIQVVAEDVDQGQNGQVTYT 2166

Query: 183  LRGPYEK-MFSIN-DSGHISIVDLSALNTST-IQLVVVATDTGNP 224
            +    +  +F I+  +G I+   +      T  +LV+ ATD G+P
Sbjct: 2167 IESSNQSGLFKIDPQTGSITTTAIMDREIWTQAKLVIKATDRGSP 2211



 Score = 47.4 bits (111), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 45/150 (30%), Positives = 72/150 (48%), Gaps = 12/150 (8%)

Query: 88   RFSISR-QGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQ 146
            +F I R  G +SL   LDYE    Y+ T+ A+D+   + A + + V +VND  P F    
Sbjct: 2278 KFDIDRYNGRVSLTAPLDYEERTWYKLTIRASDSKHQSEANLTVVVEDVNDNVPTFTQDL 2337

Query: 147  YELFLP-HIPLADLTPGSVIGKVEAADGDKGDRVTLSLR---GPYEKMFSINDSGHISIV 202
            Y++ LP H P     PGS +  V A D D G+   +S R      +  +    +G + I 
Sbjct: 2338 YQVTLPEHSP-----PGSPVITVTATDRDSGENGKVSYRVLSSTRDGFYVDPKNGTLFIR 2392

Query: 203  DLSALNTS--TIQLVVVATDTGNPPRQASV 230
              +  +    ++ +V+ A D G+PP  +S 
Sbjct: 2393 QKAKFDPEEPSVSIVIEARDGGSPPLSSSA 2422



 Score = 44.7 bits (104), Expect = 0.076,   Method: Compositional matrix adjust.
 Identities = 58/218 (26%), Positives = 97/218 (44%), Gaps = 35/218 (16%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGERFSIS-RQGDISLM 100
            F+++ Y V+  E+ P    ++TVT    +   + +V Y + +   + F +  + G + + 
Sbjct: 2333 FTQDLYQVTLPEHSPPGSPVITVTATDRDSGENGKVSYRVLSSTRDGFYVDPKNGTLFIR 2392

Query: 101  QCLDYETED-SYRFTVYATDTL---MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
            Q   ++ E+ S    + A D     +++SATV + +++VND  P F   +Y+  +     
Sbjct: 2393 QKAKFDPEEPSVSIVIEARDGGSPPLSSSATVQVQLMDVNDNAPIFHQLEYKATVSE--- 2449

Query: 157  ADLTPGSVIGKVEAADGD-----KGDRVTLSLRGPYEKMFSINDS-----GH-------- 198
             D  PG+ I  +EA DGD      G    ++  G     F I  S     GH        
Sbjct: 2450 -DQLPGATILTLEAVDGDLSQENSGFDFAIA-SGNVGNAFQIESSVRFIEGHGFQTVGTL 2507

Query: 199  --ISIVDLSALNTSTIQLVVVATDTGNPPRQASVPAIM 234
                 +D  AL  S   L V  +D G P R +SVPAI+
Sbjct: 2508 ILAERLDFEAL--SHYNLTVSVSDRGVPQRSSSVPAII 2543



 Score = 42.0 bits (97), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 48/157 (30%), Positives = 68/157 (43%), Gaps = 19/157 (12%)

Query: 93  RQGDISLMQCLDYETEDSYRFTVYATDTLM---TTSATVNISVVNVNDWDPRFRYPQYEL 149
           R G I+L + LDYE    +   V A D       T+A V I V + ND  P        +
Sbjct: 273 RSGIITLNKALDYEMRKVHELVVQARDNASHPEITNAFVTIHVRDYNDNQPTMTI----I 328

Query: 150 FL-----PHIPLADLTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKM-FSINDS-GHIS 200
           FL     P I      PG  + ++  +D D G+   V +SL G   K   +  DS  ++ 
Sbjct: 329 FLSEDGSPQISEG-AQPGQYVARISVSDPDYGEYSNVNVSLEGGDGKFALTTKDSIIYLI 387

Query: 201 IVD--LSALNTSTIQLVVVATDTGNPPRQASVPAIMH 235
            VD  L      + +L V+ATD+G PP  A     +H
Sbjct: 388 YVDQILDREERDSYELRVMATDSGTPPLHAESSFTIH 424



 Score = 40.0 bits (92), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 43/142 (30%), Positives = 65/142 (45%), Gaps = 17/142 (11%)

Query: 45   FSKNEYSVSALENL-PVNYVLLTVTTNKPRDL----RVKYWL-SNDYGERFSI-SRQGDI 97
            F   +YS+   ENL PV    L  T    RD+    R++Y + + D    F +    G +
Sbjct: 1712 FGLQQYSLEVPENLQPVELFTLKATD---RDIGESGRLEYKIKAGDPDGDFRLDGSSGAL 1768

Query: 98   SLMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHI 154
            S  + LD E + SY   V   D     + ++A+V ISV++VND  P+F    Y + +   
Sbjct: 1769 STSRPLDRERKSSYSLQVVVQDHGSPSLNSTASVEISVLDVNDNSPKFSSSSYTVDVSE- 1827

Query: 155  PLADLTPGSVIGKVEAADGDKG 176
               D   G V+    A D D+G
Sbjct: 1828 ---DAAIGLVVLDATATDVDEG 1846



 Score = 40.0 bits (92), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 47/144 (32%), Positives = 71/144 (49%), Gaps = 12/144 (8%)

Query: 88  RFSISRQ-GDISLMQCLDY-ETEDSYRFTVYATDTLMTTSATVNISVV-NVNDWDPRFRY 144
           +FSI+++ G I     LD  E  DS+ FTV ATD    +S+   +  + ++ND  P F  
Sbjct: 592 QFSINKESGQICTSTALDRDEGADSFHFTVTATDGGGLSSSASVLVSLEDINDNRPSFYP 651

Query: 145 PQYELFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTL-SLRGPYEKMFSIN-DSGHIS 200
             Y + L        +PG+ + +V A D D G   RVT  ++ G     F++N D+G IS
Sbjct: 652 LNYAVSLS----TQSSPGTSVIRVTAHDPDAGANGRVTYHTVSGGGSSFFTLNKDTGVIS 707

Query: 201 IV-DLSALNTSTIQLVVVATDTGN 223
           +   L     S I +V+ A D G 
Sbjct: 708 LSRSLHGKANSVIPMVISARDGGG 731



 Score = 39.3 bits (90), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 67/310 (21%), Positives = 124/310 (40%), Gaps = 40/310 (12%)

Query: 21   DNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNY---VLLTVTTNKPRDLRV 77
            D   R+ALA + V     +     F     + S  EN P+N    VL  +  +     ++
Sbjct: 2634 DGHGRFALAPISVEVKDINDNRPYFPIATLTASIRENQPLNSAVTVLHAIDYDTGVYGQL 2693

Query: 78   KYWL---SNDYGERFSISRQ-GDISLMQCLDYETEDSYRFTVYATDTLMTTSA-TVNISV 132
            KY+L   S+   + F + +  G++   Q  D+E  +S+ F   A D    ++  TV + +
Sbjct: 2694 KYYLMDHSSPGKDLFFVDQNSGEVRTKQIFDFEKVNSFNFIALAVDAGNNSATVTVQVFI 2753

Query: 133  VNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG-DRVTLSLRGPYEKMF 191
               +++DP F        +P         G  IG V+A D D G D + L         F
Sbjct: 2754 TGEDEYDPVFTTSDLSFEVPE----GAKKGQSIGLVQAKDEDGGVDGIVLYSFPNSSPYF 2809

Query: 192  SINDSGHISIVDLS-----------ALNTSTIQLVVVATDTGNPPRQASVPAIMHFPEAI 240
             +N +  +  + +               T  + + V A    +  R AS        + I
Sbjct: 2810 DVNKTTGVIYLKMDNSGSSSGGSRSKRETRLMTMDVSAHSPLDTSRVASA-------QVI 2862

Query: 241  VQQASSKLNSGTSSTVLII------LGVVLIVLGFVIILLILYIHKNKHTKNNGPPGSSH 294
            +   ++     T   +L++      LGV++++   VII + LY+ ++K  K     G+S 
Sbjct: 2863 IDVTNTSFGLATDFNILLVSIIAASLGVIVLL---VIIAVALYLVRSKRKKKGQDAGNST 2919

Query: 295  SKNDSFLSNV 304
            + + + L  +
Sbjct: 2920 ASSGTALQKL 2929


>gi|218505737|ref|NP_001136215.1| protocadherin-15 isoform CD2-2 precursor [Mus musculus]
          Length = 1518

 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 61/195 (31%), Positives = 99/195 (50%), Gaps = 14/195 (7%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGER-FSISRQ-GDISLMQ 101
           +F +  YS+   E + +  +LL +         + Y + N   +R F++S   G +SL +
Sbjct: 615 RFPQLMYSLEVSEAMRIGAILLNLQATDREGDPITYAIENGDPQRVFNLSETTGILSLGK 674

Query: 102 CLDYETEDSYRFTVYATDTL--MTTSATVNISVVNVNDWDPRFRYPQYELFLP-HIPLAD 158
            LD E+ D Y   V A+D     T++ATVNI V +VND  P F     + +LP ++ + +
Sbjct: 675 ALDRESTDRYILIVTASDGRPDGTSTATVNIVVTDVNDNAPVF-----DPYLPRNLSVVE 729

Query: 159 LTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDSGHI-SIVDLSALNTSTIQLV 215
               + +G+V A D D G   +V  SL G +  +F I  +G I + V L+       +LV
Sbjct: 730 EEANAFVGQVRATDPDAGINGQVHYSL-GNFNNLFRITSNGSIYTAVKLNREARDHYELV 788

Query: 216 VVATDTGNPPRQASV 230
           VVATD    PR +++
Sbjct: 789 VVATDGAVHPRHSTL 803



 Score = 55.8 bits (133), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 65/245 (26%), Positives = 110/245 (44%), Gaps = 35/245 (14%)

Query: 6   DFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVL- 64
           DF Q   LV++A Q +     A A+L +     + +   F+   Y    LE+ PV   + 
Sbjct: 356 DFHQKFDLVIKAEQDNGHPLPAFASLHIEILDENNQSPYFTMPSYQGYILESAPVGATIS 415

Query: 65  --LTVTT-----------NKPRDLRVKYWLSNDYGERFSISRQG---DISLMQCLDYETE 108
             L +TT              +D  +  +L NDY   F+++  G    ++L+Q +D E +
Sbjct: 416 ESLNLTTPLRIVALDKDIEDTKDPELHLFL-NDYTSVFTVTPTGITRYLTLLQPVDREEQ 474

Query: 109 DSYRFTVYATDTLMTTS-ATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGK 167
            +Y F + A D +  +    VNI V++ ND  P F    Y++++      D++PG  + +
Sbjct: 475 QTYTFLITAFDGVQESEPVVVNIRVMDANDNTPTFPEISYDVYV----YTDMSPGDSVIQ 530

Query: 168 VEAADGDKGDRVTLSLRGPYEKM------FSIND-SGHISIV-DLSALNTSTIQLVVVAT 219
           + A D D+G    +S    YE +      F IN  +G +SI   +  +   T  L V A+
Sbjct: 531 LTAVDADEGSNGEIS----YEILVGGKGDFVINKTTGLVSIAPGVELIVGQTYALTVQAS 586

Query: 220 DTGNP 224
           D   P
Sbjct: 587 DNAPP 591



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 71/233 (30%), Positives = 104/233 (44%), Gaps = 26/233 (11%)

Query: 13   LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKP 72
            LVV A       R++  TL +           F+ + Y+V   ENLP     L +   K 
Sbjct: 787  LVVVATDGAVHPRHSTLTLYIKVLDIDDNSPVFTNSTYTVVVEENLPAGTSFLQIEA-KD 845

Query: 73   RDL--RVKYWL-SNDYGERFSISR-QGDISLMQCLDYET----EDSYRFTVYATD---TL 121
             DL   V Y + S +    F++    G++SL++ LDYE     E S  F V A D   T+
Sbjct: 846  VDLGANVSYRIRSPEVKHLFALHPFTGELSLLRSLDYEAFPDQEASITFLVEAFDIYGTM 905

Query: 122  MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDK----GD 177
                ATV + V ++ND+ P F    Y+  +      D   G+ I  V A D D       
Sbjct: 906  PPGIATVTVIVKDMNDYPPVFSKRIYKGMV----APDAVKGTPITTVYAEDADPPGMPAS 961

Query: 178  RVTL---SLRGPY-EKMFSIN-DSGHI-SIVDLSALNTSTIQLVVVATDTGNP 224
            RV      ++ PY   +F +  DSG + + V+L+   T+  +LVVVA D G P
Sbjct: 962  RVRYRVDDVQFPYPASIFDVEEDSGRVVTRVNLNEEPTTIFKLVVVAFDDGEP 1014


>gi|148700220|gb|EDL32167.1| cadherin 23 (otocadherin), isoform CRA_a [Mus musculus]
          Length = 3319

 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 60/195 (30%), Positives = 92/195 (47%), Gaps = 20/195 (10%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWLSNDYGERFSIS-RQGDISLM 100
            F +  Y  +  E++ V  V+L VT           ++Y L +  G +F+I+   GDIS++
Sbjct: 2402 FDQPSYQEAVFEDIAVGTVILRVTATDADSGNFALIEYSLVDGEG-KFAINPNTGDISVL 2460

Query: 101  QCLDYETEDSYRFTVYATDT-------LMTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
              LD E +D Y  T  A D            S  V I V++VND  P+F  PQ+   +  
Sbjct: 2461 SSLDREKKDHYILTALAKDNPGDVASNRRENSVQVVIRVLDVNDCRPQFSKPQFSTSV-- 2518

Query: 154  IPLADLTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSIN-DSGHISIVDLSALNTS 210
                +   G+ +  + A D D+G   ++T SL GP  + FS++ DSG ++       +  
Sbjct: 2519 --YENEPAGTSVITMLATDQDEGSNSQLTYSLEGPGMEAFSVDMDSGLVT-TQRPLQSYE 2575

Query: 211  TIQLVVVATDTGNPP 225
               L VVATD G PP
Sbjct: 2576 RFNLTVVATDGGEPP 2590



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 67/217 (30%), Positives = 98/217 (45%), Gaps = 42/217 (19%)

Query: 45  FSKNEYSVSALENLPVNY-VLLTVTTNKPRDLRVKYWLSNDYGE-----------RFSI- 91
           FSK  Y VS LEN+     VL    T+  R        S +YG+           +F I 
Sbjct: 671 FSKPAYFVSVLENIMAGATVLFLNATDLDR--------SREYGQESIIYSLEGSSQFRIN 722

Query: 92  SRQGDISLMQCLDYETEDSYRFTVYATD-----TLMTTSATVNISVVNVNDWDPRFRYPQ 146
           +R G+I+    LD ET+  Y   V A D        T  ATVN++++++ND  P ++   
Sbjct: 723 ARSGEITTTSLLDRETKSEYILIVRAVDGGVGHNQKTGIATVNVTLLDINDNHPTWKDAP 782

Query: 147 YELFLPHIPLADLT-PGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSIND-SGHISI-- 201
           Y     +I L ++T P S +  V A D D G+  TL     P  K +S+N  +G I    
Sbjct: 783 Y-----YINLVEMTPPDSDVTTVVAVDPDLGENGTLVYSIHPPNKFYSLNSTTGKIRTTH 837

Query: 202 VDLSALNTSTIQ------LVVVATDTGNPPRQASVPA 232
           V L   N   ++      ++V  TD G PP +A+  A
Sbjct: 838 VMLDRENPDPVEAELMRKIIVSVTDCGRPPLKATSSA 874



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 65/210 (30%), Positives = 94/210 (44%), Gaps = 28/210 (13%)

Query: 45  FSKNEYSVSALENLPVNYVLLTV--TTNKPRDL-RVKYWLSNDYGERFSISRQ-GDISLM 100
           FS+  Y+VS  EN+ V   +LTV  T N       V Y+ S+D  +RFS+ +  G I L+
Sbjct: 460 FSQPLYNVSLYENITVGTSVLTVLATDNDVGTFGEVNYFFSDD-PDRFSLDKDTGLIMLI 518

Query: 101 QCLDYETEDSYRFTVYATDTL-MTTSATVNISVVNVNDWDPRFRYPQYELFL----PHIP 155
             LDYE    +  TV A D     T+  V I+V++VND  P F+   Y   L    P + 
Sbjct: 519 ARLDYELIQRFTLTVIARDGGGEETTGRVRINVLDVNDNVPTFQKDAYVGALRENEPSV- 577

Query: 156 LADLTPGSVIGKVEAADGDKGDR-------VTLSLRGPYEKMFSINDSGHISI---VDLS 205
                  + + ++ A D D           V  S  G Y  +      G IS+   +D  
Sbjct: 578 -------TQLVRLRATDEDSPPNNLITYSIVNASAFGSYFDISIYEGYGVISVSRPLDYE 630

Query: 206 ALNTSTIQLVVVATDTGNPPRQASVPAIMH 235
            +    I L V+A D GNPP  ++VP  + 
Sbjct: 631 QIPNGLIYLTVMAKDAGNPPLYSTVPVTIE 660



 Score = 45.8 bits (107), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 45/142 (31%), Positives = 68/142 (47%), Gaps = 20/142 (14%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVT-TNKPRDL--RVKYWLSNDYGERFSIS------RQG 95
            FS   Y+V  LEN P  + +L VT T++   L   + Y +     +RF I       R G
Sbjct: 2069 FSPPTYTVHLLENCPPGFSVLQVTATDEDSGLNGELVYRIEAGAQDRFLIHPVTGVIRVG 2128

Query: 96   DISLMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLP 152
            + +    +D E ++SYR TV ATD     ++ +A V I + ++ND  P F  P   + + 
Sbjct: 2129 NAT----IDREEQESYRLTVVATDRGTVPLSGTAIVTILIDDINDSRPEFLNPIQTVSV- 2183

Query: 153  HIPLADLTPGSVIGKVEAADGD 174
               L    PG++I  V A D D
Sbjct: 2184 ---LESAEPGTIIANVTAIDLD 2202



 Score = 45.8 bits (107), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 57/203 (28%), Positives = 87/203 (42%), Gaps = 23/203 (11%)

Query: 43   LQFSKNEYSVSALENLPVNYVLLTVTTNKPRDL-----RVKYWLSNDYGERFSISR-QGD 96
            +QFS   Y    +ENL +   ++ V      +L     R   + S      F I    G 
Sbjct: 1311 VQFSNASYEAVIMENLALGTEIVRVQAYSIDNLNQITYRFDAYTSAQAKALFKIDAITGV 1370

Query: 97   ISLMQCLDYETEDSYRFTVYATDTLMTTSATVN--ISVVNVNDWDPRFRYPQYELFLPHI 154
            I++   +D E  D Y  TV A D      +TV   I+V++ ND  PRF +         +
Sbjct: 1371 ITVKGLVDREKGDFYTLTVVADDGGPKVDSTVKVYITVLDENDNSPRFDFTSDSAI--SV 1428

Query: 155  PLADLTPGSVIGKVEAADGDKGD--RVTLSLR-----GPYEKMFSINDSGHISI---VDL 204
            P  D   G  +  V+A D D G   +V  SL      G +E + S +  G + +   +D 
Sbjct: 1429 P-EDCPVGQRVATVKARDPDAGSNGQVVFSLASGNIAGAFEIITSNDSIGEVFVAKPLDR 1487

Query: 205  SALNTSTIQLVVVATDTGNPPRQ 227
              L+   ++  VVA+D G PPR+
Sbjct: 1488 EELDHYILK--VVASDRGTPPRK 1508



 Score = 43.1 bits (100), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 54/199 (27%), Positives = 89/199 (44%), Gaps = 26/199 (13%)

Query: 44  QFSKNEYSVSALENLPVNYVL--LTVTTNKPRDLRV----KYWLSNDYGERF-----SIS 92
           +F+ +EYSV+  E   V + L       +K  +L +    + +L  +    F     S+ 
Sbjct: 347 EFNSSEYSVAITELAQVGFALPLFIQVVDKDENLGLNSMFEVYLVGNNSHHFIISPTSVQ 406

Query: 93  RQGDISLMQC--LDYETEDSYRFTVYATDTL--MTTSATVNISVVNVNDWDPRFRYPQYE 148
            + DI +     LDYET D Y F ++A +++      A V I+++N ND  P F  P Y 
Sbjct: 407 GKADIRIRVAIPLDYETVDRYDFDLFANESVPDHVGYAKVKITLINENDNRPIFSQPLYN 466

Query: 149 LFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDSGHISIVDLSA 206
           + L      ++T G+ +  V A D D G    V        ++     D+G I ++  + 
Sbjct: 467 VSL----YENITVGTSVLTVLATDNDVGTFGEVNYFFSDDPDRFSLDKDTGLIMLI--AR 520

Query: 207 LNTSTIQ---LVVVATDTG 222
           L+   IQ   L V+A D G
Sbjct: 521 LDYELIQRFTLTVIARDGG 539



 Score = 42.7 bits (99), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 40/137 (29%), Positives = 64/137 (46%), Gaps = 29/137 (21%)

Query: 65   LTVTTNKPRDLRVKYWLS---NDYG---------------ERFSIS-RQGDISLMQCLDY 105
            ++V+ + PR+ RV  WL+   ND G                +FS+  R   +  +  LD 
Sbjct: 1002 VSVSEDVPREFRV-VWLNCTDNDVGLNAELSYFITAGNVDGKFSVGYRDAVVRTVVGLDR 1060

Query: 106  ETEDSYRFTVYATDT-----LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLT 160
            ET  +Y   + A D        T +ATV ++V++VND  P F    YE  +P     D+ 
Sbjct: 1061 ETTAAYTLVLEAIDNGPVGKRRTGTATVFVTVLDVNDNRPIFLQSSYEASVPE----DIP 1116

Query: 161  PGSVIGKVEAADGDKGD 177
             G  I +++A D D+G+
Sbjct: 1117 EGHSIVQLKATDADEGE 1133



 Score = 41.6 bits (96), Expect = 0.69,   Method: Compositional matrix adjust.
 Identities = 39/124 (31%), Positives = 62/124 (50%), Gaps = 15/124 (12%)

Query: 92   SRQGDISLMQCLDYETEDSYRFTVYATDTLMTTSAT---VNISVVNVNDWDPRFRYPQYE 148
            S  G +   + +DYE      FTV A+D      A    V + +V++ND +P F  P Y+
Sbjct: 2349 SSAGKVIANRTVDYEEVHWLNFTVRASDNGSPPRAAEIPVYLEIVDINDNNPIFDQPSYQ 2408

Query: 149  LFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-DSGHISIVDL 204
              +      D+  G+VI +V A D D G+   +    + G  E  F+IN ++G IS+  L
Sbjct: 2409 EAV----FEDIAVGTVILRVTATDADSGNFALIEYSLVDG--EGKFAINPNTGDISV--L 2460

Query: 205  SALN 208
            S+L+
Sbjct: 2461 SSLD 2464



 Score = 38.9 bits (89), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 66/232 (28%), Positives = 99/232 (42%), Gaps = 25/232 (10%)

Query: 12   TLVVRAIQYDN----QDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTV 67
            TLV+ AI  DN    + R   AT+ V+    +     F ++ Y  S  E++P  + ++ +
Sbjct: 1067 TLVLEAI--DNGPVGKRRTGTATVFVTVLDVNDNRPIFLQSSYEASVPEDIPEGHSIVQL 1124

Query: 68   -TTNKPRDLRVKYW---LSNDYGERFSISRQGDISLMQC---LDYETEDSYRFTVYATD- 119
              T+       + W   L  ++G  F I   G   LM+    LD E   S+   V A + 
Sbjct: 1125 KATDADEGEFGRVWYRILHGNHGNNFRI-HVGSGLLMRGPRPLDRERNSSHVLMVEAYNH 1183

Query: 120  --TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTP-GSVIGKVEAADGDKG 176
                M +S  V + V +VND  P F   QY      + L +    G+ +  V A D D G
Sbjct: 1184 DLGPMRSSVRVIVYVEDVNDEAPVFTQQQYN----RLGLRETAGIGTSVIVVRATDKDTG 1239

Query: 177  DRVTLSLR--GPYEKMFSINDS-GHISIVDLSALNTSTIQLVVVATDTGNPP 225
            D   ++ R     E  F I++S G I  VD     T T  L+ V+   G PP
Sbjct: 1240 DGGLVNYRILSGAEGKFEIDESTGLIVTVDYLDYETKTSYLMNVSATDGAPP 1291



 Score = 38.1 bits (87), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 62/217 (28%), Positives = 91/217 (41%), Gaps = 30/217 (13%)

Query: 25  RYALAT--------LIVSKAGTSLRELQFSKNEYSVSAL---ENLPVNYVLLTVTTNKPR 73
           RY+L T        ++V  +   +  L F  N +  + L   E+ PV     +VT    R
Sbjct: 2   RYSLVTCYAVLWLLMLVPGSWGQVNRLPFFTNHFFDTYLLISEDTPVGS---SVTQLLAR 58

Query: 74  DLR---VKYWLSNDYGERFSISR--QGDISLMQCLDYETEDSYRFTVYATDTLMTTSATV 128
           D+    + + +S +   RF       G + L Q LD ET+  +      +D     +  V
Sbjct: 59  DMDNDPLVFGVSGEEASRFFAVEPDTGVVWLRQPLDRETKSEFTVEFSVSDHQGVITRKV 118

Query: 129 NISVVNVNDWDPRFRYPQYELFLPHIPLADLTP-GSVIGKVEAADGD--KGDRVTLSLRG 185
           NI V +VND  P F    Y + +P     + TP G+ I  V A D D   G  V  S + 
Sbjct: 119 NIQVGDVNDNAPTFHNQPYSVRIP-----ENTPVGTPIFIVNATDPDLGAGGSVLYSFQP 173

Query: 186 PYEKMFSINDSGHISIV--DLSALNTSTIQLVVVATD 220
           P    F+I+ +  I  V  +L    T   QL V ATD
Sbjct: 174 P-SPFFAIDSARGIVTVIQELDYEVTQAYQLTVNATD 209



 Score = 38.1 bits (87), Expect = 7.5,   Method: Compositional matrix adjust.
 Identities = 61/285 (21%), Positives = 118/285 (41%), Gaps = 59/285 (20%)

Query: 4    EDDFL-QPITLVVRA----IQYDNQDRYALATLIVSK-----AGTSL-----RELQFSKN 48
            +D FL  P+T V+R     I  + Q+ Y L  +   +     +GT++      ++  S+ 
Sbjct: 2113 QDRFLIHPVTGVIRVGNATIDREEQESYRLTVVATDRGTVPLSGTAIVTILIDDINDSRP 2172

Query: 49   EY-----SVSALENLPVNYVLLTVTT-----NKPRDLRVKYWLSNDYGER--------FS 90
            E+     +VS LE+     ++  VT      N   +  +   ++ D  +R        F+
Sbjct: 2173 EFLNPIQTVSVLESAEPGTIIANVTAIDLDLNPKLEYHIISIVAKDDTDRLVPDQEDAFA 2232

Query: 91   IS-RQGDISLMQCLDYETEDSYRFTVYATD--------TLMTTSATVNISVVNVNDWDPR 141
            ++   G + +   L+ E   +Y  T+   D        ++   +A + +++++VND  P+
Sbjct: 2233 VNINTGSVMVKSPLNRELVATYEVTLSVIDNASDLPEHSVSVPNAKLTVNILDVNDNTPQ 2292

Query: 142  FRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSGHISI 201
            F+ P    +     L   TPG+ +  V A D DKG    ++       +  +   G++ +
Sbjct: 2293 FK-PFGITYYTERVLEGATPGTTLIAVAAVDPDKGLNGLITY-----TLLDLTPPGYVQL 2346

Query: 202  VDLSA-----------LNTSTIQLVVVATDTGNPPRQASVPAIMH 235
             D SA                +   V A+D G+PPR A +P  + 
Sbjct: 2347 EDSSAGKVIANRTVDYEEVHWLNFTVRASDNGSPPRAAEIPVYLE 2391


>gi|60417434|emb|CAI59609.1| cadherin 23 [Mus musculus]
          Length = 3283

 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 60/195 (30%), Positives = 92/195 (47%), Gaps = 20/195 (10%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWLSNDYGERFSIS-RQGDISLM 100
            F +  Y  +  E++ V  V+L VT           ++Y L +  G +F+I+   GDIS++
Sbjct: 2400 FDQPSYQEAVFEDIAVGTVILRVTATDADSGNFALIEYSLVDGEG-KFAINPNTGDISVL 2458

Query: 101  QCLDYETEDSYRFTVYATDT-------LMTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
              LD E +D Y  T  A D            S  V I V++VND  P+F  PQ+   +  
Sbjct: 2459 SSLDREKKDHYILTALAKDNPGDVASNRRENSVQVVIRVLDVNDCRPQFSKPQFSTSV-- 2516

Query: 154  IPLADLTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSIN-DSGHISIVDLSALNTS 210
                +   G+ +  + A D D+G   ++T SL GP  + FS++ DSG ++       +  
Sbjct: 2517 --YENEPAGTSVITMLATDQDEGSNSQLTYSLEGPGMEAFSVDMDSGLVT-TQRPLQSYE 2573

Query: 211  TIQLVVVATDTGNPP 225
               L VVATD G PP
Sbjct: 2574 RFNLTVVATDGGEPP 2588



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 67/217 (30%), Positives = 98/217 (45%), Gaps = 42/217 (19%)

Query: 45  FSKNEYSVSALENLPVNY-VLLTVTTNKPRDLRVKYWLSNDYGE-----------RFSI- 91
           FSK  Y VS LEN+     VL    T+  R        S +YG+           +F I 
Sbjct: 669 FSKPAYFVSVLENIMAGATVLFLNATDLDR--------SREYGQESIIYSLEGSSQFRIN 720

Query: 92  SRQGDISLMQCLDYETEDSYRFTVYATD-----TLMTTSATVNISVVNVNDWDPRFRYPQ 146
           +R G+I+    LD ET+  Y   V A D        T  ATVN++++++ND  P ++   
Sbjct: 721 ARSGEITTTSLLDRETKSEYILIVRAVDGGVGHNQKTGIATVNVTLLDINDNHPTWKDAP 780

Query: 147 YELFLPHIPLADLT-PGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSIND-SGHISI-- 201
           Y     +I L ++T P S +  V A D D G+  TL     P  K +S+N  +G I    
Sbjct: 781 Y-----YINLVEMTPPDSDVTTVVAVDPDLGENGTLVYSIHPPNKFYSLNSTTGKIRTTH 835

Query: 202 VDLSALNTSTIQ------LVVVATDTGNPPRQASVPA 232
           V L   N   ++      ++V  TD G PP +A+  A
Sbjct: 836 VMLDRENPDPVEAELMRKIIVSVTDCGRPPLKATSSA 872



 Score = 52.4 bits (124), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 65/210 (30%), Positives = 94/210 (44%), Gaps = 28/210 (13%)

Query: 45  FSKNEYSVSALENLPVNYVLLTV--TTNKPRDL-RVKYWLSNDYGERFSISRQ-GDISLM 100
           FS+  Y+VS  EN+ V   +LTV  T N       V Y+ S+D  +RFS+ +  G I L+
Sbjct: 458 FSQPLYNVSLYENITVGTSVLTVLATDNDVGTFGEVNYFFSDD-PDRFSLDKDTGLIMLI 516

Query: 101 QCLDYETEDSYRFTVYATDTL-MTTSATVNISVVNVNDWDPRFRYPQYELFL----PHIP 155
             LDYE    +  TV A D     T+  V I+V++VND  P F+   Y   L    P + 
Sbjct: 517 ARLDYELIQRFTLTVIARDGGGEETTGRVRINVLDVNDNVPTFQKDAYVGALRENEPSV- 575

Query: 156 LADLTPGSVIGKVEAADGDKGDR-------VTLSLRGPYEKMFSINDSGHISI---VDLS 205
                  + + ++ A D D           V  S  G Y  +      G IS+   +D  
Sbjct: 576 -------TQLVRLRATDEDSPPNNLITYSIVNASAFGSYFDISIYEGYGVISVSRPLDYE 628

Query: 206 ALNTSTIQLVVVATDTGNPPRQASVPAIMH 235
            +    I L V+A D GNPP  ++VP  + 
Sbjct: 629 QIPNGLIYLTVMAKDAGNPPLYSTVPVTIE 658



 Score = 45.8 bits (107), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 45/142 (31%), Positives = 68/142 (47%), Gaps = 20/142 (14%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVT-TNKPRDL--RVKYWLSNDYGERFSIS------RQG 95
            FS   Y+V  LEN P  + +L VT T++   L   + Y +     +RF I       R G
Sbjct: 2067 FSPPTYTVHLLENCPPGFSVLQVTATDEDSGLNGELVYRIEAGAQDRFLIHPVTGVIRVG 2126

Query: 96   DISLMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLP 152
            + +    +D E ++SYR TV ATD     ++ +A V I + ++ND  P F  P   + + 
Sbjct: 2127 NAT----IDREEQESYRLTVVATDRGTVPLSGTAIVTILIDDINDSRPEFLNPIQTVSV- 2181

Query: 153  HIPLADLTPGSVIGKVEAADGD 174
               L    PG++I  V A D D
Sbjct: 2182 ---LESAEPGTIIANVTAIDLD 2200



 Score = 45.8 bits (107), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 57/203 (28%), Positives = 87/203 (42%), Gaps = 23/203 (11%)

Query: 43   LQFSKNEYSVSALENLPVNYVLLTVTTNKPRDL-----RVKYWLSNDYGERFSISR-QGD 96
            +QFS   Y    +ENL +   ++ V      +L     R   + S      F I    G 
Sbjct: 1309 VQFSNASYEAVIMENLALGTEIVRVQAYSIDNLNQITYRFDAYTSAQAKALFKIDAITGV 1368

Query: 97   ISLMQCLDYETEDSYRFTVYATDTLMTTSATVN--ISVVNVNDWDPRFRYPQYELFLPHI 154
            I++   +D E  D Y  TV A D      +TV   I+V++ ND  PRF +         +
Sbjct: 1369 ITVKGLVDREKGDFYTLTVVADDGGPKVDSTVKVYITVLDENDNSPRFDFTSDSAI--SV 1426

Query: 155  PLADLTPGSVIGKVEAADGDKGD--RVTLSLR-----GPYEKMFSINDSGHISI---VDL 204
            P  D   G  +  V+A D D G   +V  SL      G +E + S +  G + +   +D 
Sbjct: 1427 P-EDCPVGQRVATVKARDPDAGSNGQVVFSLASGNIAGAFEIITSNDSIGEVFVAKPLDR 1485

Query: 205  SALNTSTIQLVVVATDTGNPPRQ 227
              L+   ++  VVA+D G PPR+
Sbjct: 1486 EELDHYILK--VVASDRGTPPRK 1506



 Score = 43.9 bits (102), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 53/197 (26%), Positives = 88/197 (44%), Gaps = 24/197 (12%)

Query: 44  QFSKNEYSVSALENLPVNYVL----LTVTTNKPRDLRVKYWLSNDYGERF-----SISRQ 94
           +F+ +EYSV+  E   V + L      V  ++  +   + +L  +    F     S+  +
Sbjct: 347 EFNSSEYSVAITELAQVGFALPLFIQVVDKDEGLNSMFEVYLVGNNSHHFIISPTSVQGK 406

Query: 95  GDISLMQC--LDYETEDSYRFTVYATDTL--MTTSATVNISVVNVNDWDPRFRYPQYELF 150
            DI +     LDYET D Y F ++A +++      A V I+++N ND  P F  P Y + 
Sbjct: 407 ADIRIRVAIPLDYETVDRYDFDLFANESVPDHVGYAKVKITLINENDNRPIFSQPLYNVS 466

Query: 151 LPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDSGHISIVDLSALN 208
           L      ++T G+ +  V A D D G    V        ++     D+G I ++  + L+
Sbjct: 467 L----YENITVGTSVLTVLATDNDVGTFGEVNYFFSDDPDRFSLDKDTGLIMLI--ARLD 520

Query: 209 TSTIQ---LVVVATDTG 222
              IQ   L V+A D G
Sbjct: 521 YELIQRFTLTVIARDGG 537



 Score = 42.7 bits (99), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 40/137 (29%), Positives = 64/137 (46%), Gaps = 29/137 (21%)

Query: 65   LTVTTNKPRDLRVKYWLS---NDYG---------------ERFSIS-RQGDISLMQCLDY 105
            ++V+ + PR+ RV  WL+   ND G                +FS+  R   +  +  LD 
Sbjct: 1000 VSVSEDVPREFRV-VWLNCTDNDVGLNAELSYFITAGNVDGKFSVGYRDAVVRTVVGLDR 1058

Query: 106  ETEDSYRFTVYATDT-----LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLT 160
            ET  +Y   + A D        T +ATV ++V++VND  P F    YE  +P     D+ 
Sbjct: 1059 ETTAAYTLVLEAIDNGPVGKRRTGTATVFVTVLDVNDNRPIFLQSSYEASVPE----DIP 1114

Query: 161  PGSVIGKVEAADGDKGD 177
             G  I +++A D D+G+
Sbjct: 1115 EGHSIVQLKATDADEGE 1131



 Score = 41.6 bits (96), Expect = 0.65,   Method: Compositional matrix adjust.
 Identities = 39/124 (31%), Positives = 62/124 (50%), Gaps = 15/124 (12%)

Query: 92   SRQGDISLMQCLDYETEDSYRFTVYATDTLMTTSAT---VNISVVNVNDWDPRFRYPQYE 148
            S  G +   + +DYE      FTV A+D      A    V + +V++ND +P F  P Y+
Sbjct: 2347 SSAGKVIANRTVDYEEVHWLNFTVRASDNGSPPRAAEIPVYLEIVDINDNNPIFDQPSYQ 2406

Query: 149  LFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-DSGHISIVDL 204
              +      D+  G+VI +V A D D G+   +    + G  E  F+IN ++G IS+  L
Sbjct: 2407 EAV----FEDIAVGTVILRVTATDADSGNFALIEYSLVDG--EGKFAINPNTGDISV--L 2458

Query: 205  SALN 208
            S+L+
Sbjct: 2459 SSLD 2462



 Score = 38.9 bits (89), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 66/232 (28%), Positives = 99/232 (42%), Gaps = 25/232 (10%)

Query: 12   TLVVRAIQYDN----QDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTV 67
            TLV+ AI  DN    + R   AT+ V+    +     F ++ Y  S  E++P  + ++ +
Sbjct: 1065 TLVLEAI--DNGPVGKRRTGTATVFVTVLDVNDNRPIFLQSSYEASVPEDIPEGHSIVQL 1122

Query: 68   -TTNKPRDLRVKYW---LSNDYGERFSISRQGDISLMQC---LDYETEDSYRFTVYATD- 119
              T+       + W   L  ++G  F I   G   LM+    LD E   S+   V A + 
Sbjct: 1123 KATDADEGEFGRVWYRILHGNHGNNFRI-HVGSGLLMRGPRPLDRERNSSHVLMVEAYNH 1181

Query: 120  --TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTP-GSVIGKVEAADGDKG 176
                M +S  V + V +VND  P F   QY      + L +    G+ +  V A D D G
Sbjct: 1182 DLGPMRSSVRVIVYVEDVNDEAPVFTQQQYN----RLGLRETAGIGTSVIVVRATDKDTG 1237

Query: 177  DRVTLSLR--GPYEKMFSINDS-GHISIVDLSALNTSTIQLVVVATDTGNPP 225
            D   ++ R     E  F I++S G I  VD     T T  L+ V+   G PP
Sbjct: 1238 DGGLVNYRILSGAEGKFEIDESTGLIVTVDYLDYETKTSYLMNVSATDGAPP 1289



 Score = 38.5 bits (88), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 62/217 (28%), Positives = 91/217 (41%), Gaps = 30/217 (13%)

Query: 25  RYALAT--------LIVSKAGTSLRELQFSKNEYSVSAL---ENLPVNYVLLTVTTNKPR 73
           RY+L T        ++V  +   +  L F  N +  + L   E+ PV     +VT    R
Sbjct: 2   RYSLVTCYAVLWLLMLVPGSWGQVNRLPFFTNHFFDTYLLISEDTPVGS---SVTQLLAR 58

Query: 74  DLR---VKYWLSNDYGERFSISR--QGDISLMQCLDYETEDSYRFTVYATDTLMTTSATV 128
           D+    + + +S +   RF       G + L Q LD ET+  +      +D     +  V
Sbjct: 59  DMDNDPLVFGVSGEEASRFFAVEPDTGVVWLRQPLDRETKSEFTVEFSVSDHQGVITRKV 118

Query: 129 NISVVNVNDWDPRFRYPQYELFLPHIPLADLTP-GSVIGKVEAADGD--KGDRVTLSLRG 185
           NI V +VND  P F    Y + +P     + TP G+ I  V A D D   G  V  S + 
Sbjct: 119 NIQVGDVNDNAPTFHNQPYSVRIP-----ENTPVGTPIFIVNATDPDLGAGGSVLYSFQP 173

Query: 186 PYEKMFSINDSGHISIV--DLSALNTSTIQLVVVATD 220
           P    F+I+ +  I  V  +L    T   QL V ATD
Sbjct: 174 P-SPFFAIDSARGIVTVIQELDYEVTQAYQLTVNATD 209



 Score = 38.1 bits (87), Expect = 6.6,   Method: Compositional matrix adjust.
 Identities = 61/285 (21%), Positives = 118/285 (41%), Gaps = 59/285 (20%)

Query: 4    EDDFL-QPITLVVRA----IQYDNQDRYALATLIVSK-----AGTSL-----RELQFSKN 48
            +D FL  P+T V+R     I  + Q+ Y L  +   +     +GT++      ++  S+ 
Sbjct: 2111 QDRFLIHPVTGVIRVGNATIDREEQESYRLTVVATDRGTVPLSGTAIVTILIDDINDSRP 2170

Query: 49   EY-----SVSALENLPVNYVLLTVTT-----NKPRDLRVKYWLSNDYGER--------FS 90
            E+     +VS LE+     ++  VT      N   +  +   ++ D  +R        F+
Sbjct: 2171 EFLNPIQTVSVLESAEPGTIIANVTAIDLDLNPKLEYHIISIVAKDDTDRLVPDQEDAFA 2230

Query: 91   IS-RQGDISLMQCLDYETEDSYRFTVYATD--------TLMTTSATVNISVVNVNDWDPR 141
            ++   G + +   L+ E   +Y  T+   D        ++   +A + +++++VND  P+
Sbjct: 2231 VNINTGSVMVKSPLNRELVATYEVTLSVIDNASDLPEHSVSVPNAKLTVNILDVNDNTPQ 2290

Query: 142  FRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSGHISI 201
            F+ P    +     L   TPG+ +  V A D DKG    ++       +  +   G++ +
Sbjct: 2291 FK-PFGITYYTERVLEGATPGTTLIAVAAVDPDKGLNGLITY-----TLLDLTPPGYVQL 2344

Query: 202  VDLSA-----------LNTSTIQLVVVATDTGNPPRQASVPAIMH 235
             D SA                +   V A+D G+PPR A +P  + 
Sbjct: 2345 EDSSAGKVIANRTVDYEEVHWLNFTVRASDNGSPPRAAEIPVYLE 2389


>gi|85725303|gb|ABC79269.1| protocadherin-15-CD2 isoform 2 [Mus musculus]
          Length = 1518

 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 61/195 (31%), Positives = 99/195 (50%), Gaps = 14/195 (7%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGER-FSISRQ-GDISLMQ 101
           +F +  YS+   E + +  +LL +         + Y + N   +R F++S   G +SL +
Sbjct: 615 RFPQLMYSLEVSEAMRIGAILLNLQATDREGDPITYAIENGDPQRVFNLSETTGILSLGK 674

Query: 102 CLDYETEDSYRFTVYATDTL--MTTSATVNISVVNVNDWDPRFRYPQYELFLP-HIPLAD 158
            LD E+ D Y   V A+D     T++ATVNI V +VND  P F     + +LP ++ + +
Sbjct: 675 ALDRESTDRYILIVTASDGRPDGTSTATVNIVVTDVNDNAPVF-----DPYLPRNLSVVE 729

Query: 159 LTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDSGHI-SIVDLSALNTSTIQLV 215
               + +G+V A D D G   +V  SL G +  +F I  +G I + V L+       +LV
Sbjct: 730 EEANAFVGQVRATDPDAGINGQVHYSL-GNFNNLFRITSNGSIYTAVKLNREARDHYELV 788

Query: 216 VVATDTGNPPRQASV 230
           VVATD    PR +++
Sbjct: 789 VVATDGAVHPRHSTL 803



 Score = 55.8 bits (133), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 65/245 (26%), Positives = 110/245 (44%), Gaps = 35/245 (14%)

Query: 6   DFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVL- 64
           DF Q   LV++A Q +     A A+L +     + +   F+   Y    LE+ PV   + 
Sbjct: 356 DFHQKFDLVIKAEQDNGHPLPAFASLHIEILDENNQSPYFTMPSYQGYILESAPVGATIS 415

Query: 65  --LTVTT-----------NKPRDLRVKYWLSNDYGERFSISRQG---DISLMQCLDYETE 108
             L +TT              +D  +  +L NDY   F+++  G    ++L+Q +D E +
Sbjct: 416 ESLNLTTPLRIVALDKDIEDTKDPELHLFL-NDYTSVFTVTPTGITRYLTLLQPVDREEQ 474

Query: 109 DSYRFTVYATDTLMTTS-ATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGK 167
            +Y F + A D +  +    VNI V++ ND  P F    Y++++      D++PG  + +
Sbjct: 475 QTYTFLITAFDGVQESEPVVVNIRVMDANDNTPTFPEISYDVYV----YTDMSPGDSVIQ 530

Query: 168 VEAADGDKGDRVTLSLRGPYEKM------FSIND-SGHISIV-DLSALNTSTIQLVVVAT 219
           + A D D+G    +S    YE +      F IN  +G +SI   +  +   T  L V A+
Sbjct: 531 LTAVDADEGSNGEIS----YEILVGGKGDFVINKTTGLVSIAPGVELIVGQTYALTVQAS 586

Query: 220 DTGNP 224
           D   P
Sbjct: 587 DNAPP 591



 Score = 47.8 bits (112), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 70/233 (30%), Positives = 103/233 (44%), Gaps = 26/233 (11%)

Query: 13   LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKP 72
            LVV A       R++  TL +           F+ + Y+V   ENLP     L +   K 
Sbjct: 787  LVVVATDGAVHPRHSTLTLYIKVLDIDDNSPVFTNSTYTVVVEENLPAGTSFLQIEA-KD 845

Query: 73   RDL--RVKYWL-SNDYGERFSISR-QGDISLMQCLDYET----EDSYRFTVYATD---TL 121
             DL   V Y + S +    F++    G++SL++ LDYE     E S  F   A D   T+
Sbjct: 846  VDLGANVSYRIRSPEVKHLFALHPFTGELSLLRSLDYEAFPDQEASITFLAEAFDIYGTM 905

Query: 122  MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDK----GD 177
                ATV + V ++ND+ P F    Y+  +      D   G+ I  V A D D       
Sbjct: 906  PPGIATVTVIVKDMNDYPPVFSKRIYKGMV----APDAVKGTPITTVYAEDADPPGMPAS 961

Query: 178  RVTL---SLRGPY-EKMFSIN-DSGHI-SIVDLSALNTSTIQLVVVATDTGNP 224
            RV      ++ PY   +F +  DSG + + V+L+   T+  +LVVVA D G P
Sbjct: 962  RVRYRVDDVQFPYPASIFDVEEDSGRVVTRVNLNEEPTTIFKLVVVAFDDGEP 1014


>gi|218505731|ref|NP_001136213.1| protocadherin-15 isoform CD1-10 precursor [Mus musculus]
          Length = 1913

 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 61/195 (31%), Positives = 99/195 (50%), Gaps = 14/195 (7%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGER-FSISRQ-GDISLMQ 101
           +F +  YS+   E + +  +LL +         + Y + N   +R F++S   G +SL +
Sbjct: 593 RFPQLMYSLEVSEAMRIGAILLNLQATDREGDPITYAIENGDPQRVFNLSETTGILSLGK 652

Query: 102 CLDYETEDSYRFTVYATDTL--MTTSATVNISVVNVNDWDPRFRYPQYELFLP-HIPLAD 158
            LD E+ D Y   V A+D     T++ATVNI V +VND  P F     + +LP ++ + +
Sbjct: 653 ALDRESTDRYILIVTASDGRPDGTSTATVNIVVTDVNDNAPVF-----DPYLPRNLSVVE 707

Query: 159 LTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDSGHI-SIVDLSALNTSTIQLV 215
               + +G+V A D D G   +V  SL G +  +F I  +G I + V L+       +LV
Sbjct: 708 EEANAFVGQVRATDPDAGINGQVHYSL-GNFNNLFRITSNGSIYTAVKLNREARDHYELV 766

Query: 216 VVATDTGNPPRQASV 230
           VVATD    PR +++
Sbjct: 767 VVATDGAVHPRHSTL 781



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 65/245 (26%), Positives = 110/245 (44%), Gaps = 35/245 (14%)

Query: 6   DFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVL- 64
           DF Q   LV++A Q +     A A+L +     + +   F+   Y    LE+ PV   + 
Sbjct: 334 DFHQKFDLVIKAEQDNGHPLPAFASLHIEILDENNQSPYFTMPSYQGYILESAPVGATIS 393

Query: 65  --LTVTT-----------NKPRDLRVKYWLSNDYGERFSISRQG---DISLMQCLDYETE 108
             L +TT              +D  +  +L NDY   F+++  G    ++L+Q +D E +
Sbjct: 394 ESLNLTTPLRIVALDKDIEDTKDPELHLFL-NDYTSVFTVTPTGITRYLTLLQPVDREEQ 452

Query: 109 DSYRFTVYATDTLMTTS-ATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGK 167
            +Y F + A D +  +    VNI V++ ND  P F    Y++++      D++PG  + +
Sbjct: 453 QTYTFLITAFDGVQESEPVVVNIRVMDANDNTPTFPEISYDVYV----YTDMSPGDSVIQ 508

Query: 168 VEAADGDKGDRVTLSLRGPYEKM------FSIND-SGHISIV-DLSALNTSTIQLVVVAT 219
           + A D D+G    +S    YE +      F IN  +G +SI   +  +   T  L V A+
Sbjct: 509 LTAVDADEGSNGEIS----YEILVGGKGDFVINKTTGLVSIAPGVELIVGQTYALTVQAS 564

Query: 220 DTGNP 224
           D   P
Sbjct: 565 DNAPP 569



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 71/233 (30%), Positives = 104/233 (44%), Gaps = 26/233 (11%)

Query: 13  LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKP 72
           LVV A       R++  TL +           F+ + Y+V   ENLP     L +   K 
Sbjct: 765 LVVVATDGAVHPRHSTLTLYIKVLDIDDNSPVFTNSTYTVVVEENLPAGTSFLQIEA-KD 823

Query: 73  RDL--RVKYWL-SNDYGERFSISR-QGDISLMQCLDYET----EDSYRFTVYATD---TL 121
            DL   V Y + S +    F++    G++SL++ LDYE     E S  F V A D   T+
Sbjct: 824 VDLGANVSYRIRSPEVKHLFALHPFTGELSLLRSLDYEAFPDQEASITFLVEAFDIYGTM 883

Query: 122 MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDK----GD 177
               ATV + V ++ND+ P F    Y+  +      D   G+ I  V A D D       
Sbjct: 884 PPGIATVTVIVKDMNDYPPVFSKRIYKGMV----APDAVKGTPITTVYAEDADPPGMPAS 939

Query: 178 RVTL---SLRGPY-EKMFSIN-DSGHI-SIVDLSALNTSTIQLVVVATDTGNP 224
           RV      ++ PY   +F +  DSG + + V+L+   T+  +LVVVA D G P
Sbjct: 940 RVRYRVDDVQFPYPASIFDVEEDSGRVVTRVNLNEEPTTIFKLVVVAFDDGEP 992


>gi|85725295|gb|ABC79265.1| protocadherin-15-CD1 isoform 9 [Mus musculus]
          Length = 1916

 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 61/195 (31%), Positives = 99/195 (50%), Gaps = 14/195 (7%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGER-FSISRQ-GDISLMQ 101
           +F +  YS+   E + +  +LL +         + Y + N   +R F++S   G +SL +
Sbjct: 593 RFPQLMYSLEVSEAMRIGAILLNLQATDREGDPITYAIENGDPQRVFNLSETTGILSLGK 652

Query: 102 CLDYETEDSYRFTVYATDTL--MTTSATVNISVVNVNDWDPRFRYPQYELFLP-HIPLAD 158
            LD E+ D Y   V A+D     T++ATVNI V +VND  P F     + +LP ++ + +
Sbjct: 653 ALDRESTDRYILIVTASDGRPDGTSTATVNIVVTDVNDNAPVF-----DPYLPRNLSVVE 707

Query: 159 LTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDSGHI-SIVDLSALNTSTIQLV 215
               + +G+V A D D G   +V  SL G +  +F I  +G I + V L+       +LV
Sbjct: 708 EEANAFVGQVRATDPDAGINGQVHYSL-GNFNNLFRITSNGSIYTAVKLNREARDHYELV 766

Query: 216 VVATDTGNPPRQASV 230
           VVATD    PR +++
Sbjct: 767 VVATDGAVHPRHSTL 781



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 65/245 (26%), Positives = 110/245 (44%), Gaps = 35/245 (14%)

Query: 6   DFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVL- 64
           DF Q   LV++A Q +     A A+L +     + +   F+   Y    LE+ PV   + 
Sbjct: 334 DFHQKFDLVIKAEQDNGHPLPAFASLHIEILDENNQSPYFTMPSYQGYILESAPVGATIS 393

Query: 65  --LTVTT-----------NKPRDLRVKYWLSNDYGERFSISRQG---DISLMQCLDYETE 108
             L +TT              +D  +  +L NDY   F+++  G    ++L+Q +D E +
Sbjct: 394 ESLNLTTPLRIVALDKDIEDTKDPELHLFL-NDYTSVFTVTPTGITRYLTLLQPVDREEQ 452

Query: 109 DSYRFTVYATDTLMTTS-ATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGK 167
            +Y F + A D +  +    VNI V++ ND  P F    Y++++      D++PG  + +
Sbjct: 453 QTYTFLITAFDGVQESEPVVVNIRVMDANDNTPTFPEISYDVYV----YTDMSPGDSVIQ 508

Query: 168 VEAADGDKGDRVTLSLRGPYEKM------FSIND-SGHISIV-DLSALNTSTIQLVVVAT 219
           + A D D+G    +S    YE +      F IN  +G +SI   +  +   T  L V A+
Sbjct: 509 LTAVDADEGSNGEIS----YEILVGGKGDFVINKTTGLVSIAPGVELIVGQTYALTVQAS 564

Query: 220 DTGNP 224
           D   P
Sbjct: 565 DNAPP 569



 Score = 48.5 bits (114), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 70/233 (30%), Positives = 103/233 (44%), Gaps = 26/233 (11%)

Query: 13  LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKP 72
           LVV A       R++  TL +           F+ + Y+V   ENLP     L +   K 
Sbjct: 765 LVVVATDGAVHPRHSTLTLYIKVLDIDDNSPVFTNSTYTVVVEENLPAGTSFLQIEA-KD 823

Query: 73  RDL--RVKYWL-SNDYGERFSISR-QGDISLMQCLDYET----EDSYRFTVYATD---TL 121
            DL   V Y + S +    F++    G++SL++ LDYE     E S  F   A D   T+
Sbjct: 824 VDLGANVSYRIRSPEVKHLFALHPFTGELSLLRSLDYEAFPDQEASITFLAEAFDIYGTM 883

Query: 122 MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDK----GD 177
               ATV + V ++ND+ P F    Y+  +      D   G+ I  V A D D       
Sbjct: 884 PPGIATVTVIVKDMNDYPPVFSKRIYKGMV----APDAVKGTPITTVYAEDADPPGMPAS 939

Query: 178 RVTL---SLRGPY-EKMFSIN-DSGHI-SIVDLSALNTSTIQLVVVATDTGNP 224
           RV      ++ PY   +F +  DSG + + V+L+   T+  +LVVVA D G P
Sbjct: 940 RVRYRVDDVQFPYPASIFDVEEDSGRVVTRVNLNEEPTTIFKLVVVAFDDGEP 992


>gi|297747350|ref|NP_001177099.1| FAT tumor suppressor homolog 1 [Sus scrofa]
          Length = 4588

 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 42/156 (26%), Positives = 79/156 (50%), Gaps = 11/156 (7%)

Query: 33   VSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYW---LSNDYGERF 89
            +SK   SL  + F ++ ++ + +E+ PV +++  +T   P    +  W   +  +Y   F
Sbjct: 1346 ISKPKPSLEPIAFEESFFTFTVMESDPVAHMIGVITVEPPG---IPLWFDIIGGNYDSHF 1402

Query: 90   SISR-QGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYE 148
             + +  G I + + LD E + +Y  TV ATD   T    V I V++ ND  P+F   +YE
Sbjct: 1403 DVDKGTGTIIIAKPLDAEQKSNYNLTVEATDGTTTILTQVFIKVIDTNDHRPQFSTSKYE 1462

Query: 149  LFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR 184
            + +P     D  P + I ++ A D D+ +++  +L+
Sbjct: 1463 VVIPE----DTVPETEILQISAMDKDEKNKLIYTLQ 1494



 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 62/217 (28%), Positives = 106/217 (48%), Gaps = 18/217 (8%)

Query: 29   ATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTV-TTNKPRDL--RVKYWLSNDY 85
            A + V+  G +L    F +NEY V   EN P++ ++  V  T+    +  +V Y + ND+
Sbjct: 2476 AQVRVTVIGGNLHSPVFLQNEYEVELAENAPLHTLVTEVKATDGDSGIYGQVTYHIINDF 2535

Query: 86   G-ERFSISRQGDISLMQCLDYET--EDSYRFTVYATDTLMTTS-ATVNISVVNVNDWDPR 141
              +RF  + +G I  ++ LD ET  E        A D     +  T+N+ + + ND  P+
Sbjct: 2536 AKDRFYTNERGQIFTLEKLDRETPAEKVIPIRFMAKDAGGKVAFCTINVILTDDNDNAPQ 2595

Query: 142  FRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDR--VTLSLRGPYEKM---FSIND- 195
            FR  ++E+ +     +++  G+ + KV A+D D+G    VT ++    E +     IN  
Sbjct: 2596 FRATKFEVNIG----SNVPKGTSVIKVLASDADEGSNADVTYAIEADSENVKENLEINRL 2651

Query: 196  SGHISIVD-LSALNTSTIQLVVVATDTGNPPRQASVP 231
            SG I+  + L  L        V A D G+PP+++ VP
Sbjct: 2652 SGIITTKESLVGLENEVFTFFVRAVDNGSPPKESVVP 2688



 Score = 58.2 bits (139), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 44/145 (30%), Positives = 69/145 (47%), Gaps = 8/145 (5%)

Query: 90   SISRQGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYEL 149
            +I  +  + + + LD E  D+Y  T+ ATD   ++ A V + V++ ND  P      Y  
Sbjct: 2971 NIQNEWKVYVKKPLDREKRDNYLLTITATDGTFSSKAIVEVKVLDANDNSPICEKTLYSD 3030

Query: 150  FLPHIPLADLTPGSVIGKVEAADGD--KGDRVTLSLRGPYEKMFSIN-DSGHISI-VDLS 205
             +P     D  PG +I +V A D D      +T +L GP  + F +N D+G +     L 
Sbjct: 3031 MIPE----DAFPGKLIMQVSATDADIRSNAEITYTLFGPGAEKFKLNPDTGELKTSAPLD 3086

Query: 206  ALNTSTIQLVVVATDTGNPPRQASV 230
                +T  L+V ATD G    QA++
Sbjct: 3087 REEQATYNLLVKATDGGGRFCQANI 3111



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 60/201 (29%), Positives = 97/201 (48%), Gaps = 23/201 (11%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSN-DYGERFSIS-RQGDISLMQC 102
            F K  YS    EN+ V+  ++ V  N P  L+V Y +++ D   +F+I+   G I+++  
Sbjct: 2182 FEKPFYSAEIPENIQVHSPVVHVQANSPEGLKVFYSITDGDPFSQFTINFNTGVINVIAP 2241

Query: 103  LDYETEDSYRFTVYATDTLMTTSATVNISVV--NVNDWDPRFRYPQYELFLPHIPLADLT 160
            LD+E+  +Y+ ++ ATD+L    A V + +V  ++ND  P F    Y         A L+
Sbjct: 2242 LDFESHPAYKLSIRATDSLTGAHAEVFVDIVVEDINDNPPVFVQQSY--------AATLS 2293

Query: 161  PGSVIG----KVEAADGDK--GDRVTLSLRGPYEK---MFSINDS-GHISIVD-LSALNT 209
              +VIG    +V A D D      ++  + G + K    F I+ S G IS+V  L     
Sbjct: 2294 EATVIGTSVVQVRATDSDSEPNRGISYHMFGNHSKSHDHFHIDSSTGLISLVRTLDYEQF 2353

Query: 210  STIQLVVVATDTGNPPRQASV 230
               ++ V A D G PP  + V
Sbjct: 2354 QQHKIFVRAVDGGMPPLSSEV 2374



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 68/239 (28%), Positives = 116/239 (48%), Gaps = 23/239 (9%)

Query: 5    DDFLQPI-TLVVRAIQYDNQDRY-ALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNY 62
            D  LQ + TL ++A+ +    R  A  T++VS    +     F   EY  +  E++ +  
Sbjct: 3188 DRELQAVYTLSLKAVDHGLPRRLTATGTVVVSVLDINDNPPVFEYREYGATVSEDVLIGT 3247

Query: 63   VLLTVTTNKPRDLRVKYWLS------NDYGERFSI-SRQGDISLMQCLDYETEDSYRFTV 115
             +L V     RD+     ++      N++G +FSI S+ G I +++ LDYE+   Y  TV
Sbjct: 3248 EVLQVYAAS-RDIEANAEITYSIISGNEHG-KFSIDSKTGAIFIIENLDYESSHEYYLTV 3305

Query: 116  YATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAAD 172
             ATD     ++  ATVNI+V ++ND  P F    Y   +    + + +  +V+   + AD
Sbjct: 3306 EATDGGTPSLSDVATVNINVTDINDNTPVFSQDTYTAVISEDAVLEQSVITVMA--DDAD 3363

Query: 173  GDKGDRVTLS-LRGPYEKMFSINDS-GHISI---VDLSALNTSTIQLVVVATDTGNPPR 226
            G     +  S + G     F+I+ + G + +   +D  A++  T  L V A+D G+PPR
Sbjct: 3364 GPSNSHIHYSIIDGNQGSPFTIDPARGEVKVTRLLDREAVSGYT--LTVQASDNGSPPR 3420



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 61/225 (27%), Positives = 107/225 (47%), Gaps = 19/225 (8%)

Query: 13   LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVT---T 69
            L+V+A   D   R+  A ++++    +    +FS + Y+++  EN     +L  V     
Sbjct: 3095 LLVKAT--DGGGRFCQANIVLTLEDVNDNAPEFSADPYTITVFENTEPGTLLTRVQATDA 3152

Query: 70   NKPRDLRVKYWLSNDYGERFSISR-QGDISLMQCLDYETEDSYRFTVYATD----TLMTT 124
            +   + ++ Y L +    +FSI+   G I L + LD E +  Y  ++ A D      +T 
Sbjct: 3153 DAGLNRKISYSLIDSADGQFSINEVSGIIQLEKPLDRELQAVYTLSLKAVDHGLPRRLTA 3212

Query: 125  SATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAA--DGDKGDRVTLS 182
            + TV +SV+++ND  P F Y +Y   +      D+  G+ + +V AA  D +    +T S
Sbjct: 3213 TGTVVVSVLDINDNPPVFEYREYGATVSE----DVLIGTEVLQVYAASRDIEANAEITYS 3268

Query: 183  -LRGPYEKMFSIND-SGHISIVD-LSALNTSTIQLVVVATDTGNP 224
             + G     FSI+  +G I I++ L   ++    L V ATD G P
Sbjct: 3269 IISGNEHGKFSIDSKTGAIFIIENLDYESSHEYYLTVEATDGGTP 3313



 Score = 48.1 bits (113), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 55/237 (23%), Positives = 100/237 (42%), Gaps = 37/237 (15%)

Query: 11   ITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTN 70
             T  VRA+   +  + ++  + V      LR  +FS+  Y+ +  E++P+   +  +   
Sbjct: 2669 FTFFVRAVDNGSPPKESVVPVYVKVLPPELRLPRFSEPFYTYTVSEDVPIGTEIDLIRAE 2728

Query: 71   KPRDLRVKYWLSN----DYGERFSISRQ-GDISLMQCLDYETEDSYRFTVYAT----DTL 121
                +       N    +  E F I +Q G + L + LD+E    Y+F+V A     D  
Sbjct: 2729 HSGTVLYSLVKGNTPESNRDEFFVIDKQSGRLKLEKSLDHEATKWYQFSVLARCSHDDYE 2788

Query: 122  MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTL 181
            +  S  V+I V + ND  P      YE F+    + +L  GS + ++ A+D D G    +
Sbjct: 2789 VVASVDVSIQVKDANDNSPVLESNPYEAFI----VENLPAGSRVIQIRASDLDSGTNGQV 2844

Query: 182  SLRGPYEKMFSINDSGHISIVDLSALNTST----------------IQLVVVATDTG 222
                    M++++ S  + +++  A+N  T                 Q+ VVA+D G
Sbjct: 2845 --------MYNLDQSQSVEVIESFAINMETGWITTLKELDHEKRDRYQIKVVASDLG 2893



 Score = 43.1 bits (100), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 61/240 (25%), Positives = 102/240 (42%), Gaps = 35/240 (14%)

Query: 14   VVRAIQYDNQDRYALATLIV-----SKAGTSLREL----------QFSKNEYSVSALENL 58
            ++  +  +  DRY+L   +       KA   L E+          +F +  Y V   E+ 
Sbjct: 776  ILSPLDRETTDRYSLNITVSDLGLPQKAAWRLLEIRVLDANDNPPEFLQESYFVEVSEDK 835

Query: 59   PVNYVLLTVTTNKPRDL----RVKYWLSNDYGERFSI-SRQGDISLMQCLDYETEDSYRF 113
             +N  ++ V     +DL     V Y +  D  + FSI S  G + ++  LD E +  +  
Sbjct: 836  EINSEIIPVEATD-KDLGPNGHVMYSIPTD-TDNFSIDSMTGVVKIVNPLDREEQHVHYL 893

Query: 114  TVYATDTL-----MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKV 168
             + A D       + ++  + +S+ +VND  P+F  P Y + +      DL+ G++I  +
Sbjct: 894  KIEARDQAREEPQLLSTVLLKVSLEDVNDNPPKFIPPNYRVKV----REDLSEGTIIMWL 949

Query: 169  EAADGDKGD--RVTLSLRGPYEKMFSIND-SGHISIV-DLSALNTSTIQLVVVATDTGNP 224
            EA + D G   +V  SL    E  F ++  SG + IV  L         L V A D G P
Sbjct: 950  EAYEPDLGQSSQVRYSLLDAGEGTFEVDKLSGAVRIVQQLDFEKKQVYNLTVRAKDKGKP 1009



 Score = 42.4 bits (98), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 56/215 (26%), Positives = 89/215 (41%), Gaps = 19/215 (8%)

Query: 24  DRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLR---VKYW 80
           DR A   ++V     +    +F++  Y  S  EN+P+   +++V+   P +     V Y 
Sbjct: 442 DRKASTRVLVKVLSANSHPPEFTQTAYRASFDENVPIGTTVMSVSAVDPDEGENGYVTYS 501

Query: 81  LSNDYGERFSISR-QGDISLMQCLDYE-TEDSYRFTVYATDTLMTTSATVNI----SVVN 134
           ++N     F I    G +S  + LDYE     Y   + A+D  +     V I    ++ N
Sbjct: 502 IANVNHVPFVIDHFSGAVSTSENLDYELMPRVYTLRIRASDWGLPYRREVEILATVTLNN 561

Query: 135 VNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYE-KMFSI 193
           +ND  P F     E  +P     DL  G  I  V A D D+   V   +    E  +FS+
Sbjct: 562 LNDNTPLFEKINCEGTIPR----DLGVGEQITTVSAIDADELQLVRYQIEAGNELDLFSL 617

Query: 194 NDSGHI-----SIVDLSALNTSTIQLVVVATDTGN 223
           N +  +     S++D      S   L + ATD  N
Sbjct: 618 NPTSGVLSLKQSLMDGFGAKVSFHSLRITATDGEN 652



 Score = 42.0 bits (97), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 53/191 (27%), Positives = 85/191 (44%), Gaps = 30/191 (15%)

Query: 56   ENLPVNYVLLTVTTNKP---RDLRVKYWLSNDYG-ERFSISRQ-GDISLMQCLDYETEDS 110
            EN+P+   ++ V+ +     RD  + Y + +  G   F I  + G I     LD E+   
Sbjct: 1045 ENVPIGSSVMKVSAHDEDTGRDGEIHYSIRDGSGVGVFKIDEETGVIETSDRLDRESTSH 1104

Query: 111  YRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSV-IG 166
            Y  T+YA+D     +++   V I V +VND  P+   P   ++ P I   + +P  V + 
Sbjct: 1105 YWLTIYASDQGVVPLSSFVEVYIEVEDVNDNAPQTSEP---VYYPEI--MENSPKDVSVV 1159

Query: 167  KVEAADGDKGDRVTLSLRGPYEKMFSINDSGHISIVDLSALNTSTIQ-----------LV 215
            ++EA D D      L+      K+ S N  G  SI   + L T+T +           L 
Sbjct: 1160 QIEAFDPDSSSDDKLTY-----KITSGNPQGFFSISPKTGLITTTSRKLDREQQDEHILE 1214

Query: 216  VVATDTGNPPR 226
            V  TD G+PP+
Sbjct: 1215 VTVTDNGSPPK 1225



 Score = 40.0 bits (92), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 37/128 (28%), Positives = 55/128 (42%), Gaps = 12/128 (9%)

Query: 92   SRQGDISLMQCLDYETEDSYRFTVYATDTLM---TTSATVNISVVNVNDWDPRFRYPQYE 148
            S  G ISL++ LDYE    ++  V A D  M   ++   V + V ++ND  P F  P YE
Sbjct: 2337 SSTGLISLVRTLDYEQFQQHKIFVRAVDGGMPPLSSEVIVTVDVTDLNDHSPLFDQPVYE 2396

Query: 149  LFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSINDSGHISIVDLS 205
              +          G  +  V+A D D  D   L    L G   K F ++  G   I+ L+
Sbjct: 2397 AKISE----HAAHGHFVTCVKAYDADSSDIDKLEYSILSGNDHKNFVVD--GRTGIITLA 2450

Query: 206  ALNTSTIQ 213
             L    ++
Sbjct: 2451 NLRRQALK 2458



 Score = 39.7 bits (91), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 42/162 (25%), Positives = 75/162 (46%), Gaps = 14/162 (8%)

Query: 45   FSKNEYSVSALENLPV--NYVLLTVTTNKPRDLRVKYWLS----NDYGERFSISRQGDIS 98
            FSK  +SV   EN PV  + + L VT          ++ S    N+ G  F +++QG + 
Sbjct: 3440 FSKGNHSVIIQENKPVGSSVLQLVVTDRDSSHNGPPFFFSIVSGNEEG-TFEVNQQGALL 3498

Query: 99   LMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIP 155
                ++ + +D Y   V   D     +++   ++I V+  + + P       E+F+  + 
Sbjct: 3499 TSAAINRKVKDHYLLHVKVADNGKPPLSSLTYIDIRVIEESVYPPAIL--PLEVFITAV- 3555

Query: 156  LADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSG 197
              +   G VIGK+ A D D  D +T SL    + +FS++ +G
Sbjct: 3556 -GEEYAGGVIGKIHATDQDVYDTLTYSLDPQMDTLFSVSSTG 3596


>gi|218505717|ref|NP_001136208.1| protocadherin-15 isoform CD1-4 precursor [Mus musculus]
          Length = 1936

 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 61/195 (31%), Positives = 99/195 (50%), Gaps = 14/195 (7%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGER-FSISRQ-GDISLMQ 101
           +F +  YS+   E + +  +LL +         + Y + N   +R F++S   G +SL +
Sbjct: 615 RFPQLMYSLEVSEAMRIGAILLNLQATDREGDPITYAIENGDPQRVFNLSETTGILSLGK 674

Query: 102 CLDYETEDSYRFTVYATDTL--MTTSATVNISVVNVNDWDPRFRYPQYELFLP-HIPLAD 158
            LD E+ D Y   V A+D     T++ATVNI V +VND  P F     + +LP ++ + +
Sbjct: 675 ALDRESTDRYILIVTASDGRPDGTSTATVNIVVTDVNDNAPVF-----DPYLPRNLSVVE 729

Query: 159 LTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDSGHI-SIVDLSALNTSTIQLV 215
               + +G+V A D D G   +V  SL G +  +F I  +G I + V L+       +LV
Sbjct: 730 EEANAFVGQVRATDPDAGINGQVHYSL-GNFNNLFRITSNGSIYTAVKLNREARDHYELV 788

Query: 216 VVATDTGNPPRQASV 230
           VVATD    PR +++
Sbjct: 789 VVATDGAVHPRHSTL 803



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 65/245 (26%), Positives = 110/245 (44%), Gaps = 35/245 (14%)

Query: 6   DFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVL- 64
           DF Q   LV++A Q +     A A+L +     + +   F+   Y    LE+ PV   + 
Sbjct: 356 DFHQKFDLVIKAEQDNGHPLPAFASLHIEILDENNQSPYFTMPSYQGYILESAPVGATIS 415

Query: 65  --LTVTT-----------NKPRDLRVKYWLSNDYGERFSISRQG---DISLMQCLDYETE 108
             L +TT              +D  +  +L NDY   F+++  G    ++L+Q +D E +
Sbjct: 416 ESLNLTTPLRIVALDKDIEDTKDPELHLFL-NDYTSVFTVTPTGITRYLTLLQPVDREEQ 474

Query: 109 DSYRFTVYATDTLMTTS-ATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGK 167
            +Y F + A D +  +    VNI V++ ND  P F    Y++++      D++PG  + +
Sbjct: 475 QTYTFLITAFDGVQESEPVVVNIRVMDANDNTPTFPEISYDVYV----YTDMSPGDSVIQ 530

Query: 168 VEAADGDKGDRVTLSLRGPYEKM------FSIND-SGHISIV-DLSALNTSTIQLVVVAT 219
           + A D D+G    +S    YE +      F IN  +G +SI   +  +   T  L V A+
Sbjct: 531 LTAVDADEGSNGEIS----YEILVGGKGDFVINKTTGLVSIAPGVELIVGQTYALTVQAS 586

Query: 220 DTGNP 224
           D   P
Sbjct: 587 DNAPP 591



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 71/233 (30%), Positives = 104/233 (44%), Gaps = 26/233 (11%)

Query: 13   LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKP 72
            LVV A       R++  TL +           F+ + Y+V   ENLP     L +   K 
Sbjct: 787  LVVVATDGAVHPRHSTLTLYIKVLDIDDNSPVFTNSTYTVVVEENLPAGTSFLQIEA-KD 845

Query: 73   RDL--RVKYWL-SNDYGERFSISR-QGDISLMQCLDYET----EDSYRFTVYATD---TL 121
             DL   V Y + S +    F++    G++SL++ LDYE     E S  F V A D   T+
Sbjct: 846  VDLGANVSYRIRSPEVKHLFALHPFTGELSLLRSLDYEAFPDQEASITFLVEAFDIYGTM 905

Query: 122  MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDK----GD 177
                ATV + V ++ND+ P F    Y+  +      D   G+ I  V A D D       
Sbjct: 906  PPGIATVTVIVKDMNDYPPVFSKRIYKGMV----APDAVKGTPITTVYAEDADPPGMPAS 961

Query: 178  RVTL---SLRGPY-EKMFSIN-DSGHI-SIVDLSALNTSTIQLVVVATDTGNP 224
            RV      ++ PY   +F +  DSG + + V+L+   T+  +LVVVA D G P
Sbjct: 962  RVRYRVDDVQFPYPASIFDVEEDSGRVVTRVNLNEEPTTIFKLVVVAFDDGEP 1014


>gi|85725317|gb|ABC79276.1| protocadherin-15-CD3 isoform 1 [Mus musculus]
          Length = 1682

 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 61/195 (31%), Positives = 99/195 (50%), Gaps = 14/195 (7%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGER-FSISRQ-GDISLMQ 101
           +F +  YS+   E + +  +LL +         + Y + N   +R F++S   G +SL +
Sbjct: 620 RFPQLMYSLEVSEAMRIGAILLNLQATDREGDPITYAIENGDPQRVFNLSETTGILSLGK 679

Query: 102 CLDYETEDSYRFTVYATDTL--MTTSATVNISVVNVNDWDPRFRYPQYELFLP-HIPLAD 158
            LD E+ D Y   V A+D     T++ATVNI V +VND  P F     + +LP ++ + +
Sbjct: 680 ALDRESTDRYILIVTASDGRPDGTSTATVNIVVTDVNDNAPVF-----DPYLPRNLSVVE 734

Query: 159 LTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDSGHI-SIVDLSALNTSTIQLV 215
               + +G+V A D D G   +V  SL G +  +F I  +G I + V L+       +LV
Sbjct: 735 EEANAFVGQVRATDPDAGINGQVHYSL-GNFNNLFRITSNGSIYTAVKLNREARDHYELV 793

Query: 216 VVATDTGNPPRQASV 230
           VVATD    PR +++
Sbjct: 794 VVATDGAVHPRHSTL 808



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 65/245 (26%), Positives = 110/245 (44%), Gaps = 35/245 (14%)

Query: 6   DFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVL- 64
           DF Q   LV++A Q +     A A+L +     + +   F+   Y    LE+ PV   + 
Sbjct: 361 DFHQKFDLVIKAEQDNGHPLPAFASLHIEILDENNQSPYFTMPSYQGYILESAPVGATIS 420

Query: 65  --LTVTT-----------NKPRDLRVKYWLSNDYGERFSISRQG---DISLMQCLDYETE 108
             L +TT              +D  +  +L NDY   F+++  G    ++L+Q +D E +
Sbjct: 421 ESLNLTTPLRIVALDKDIEDTKDPELHLFL-NDYTSVFTVTPTGITRYLTLLQPVDREEQ 479

Query: 109 DSYRFTVYATDTLMTTS-ATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGK 167
            +Y F + A D +  +    VNI V++ ND  P F    Y++++      D++PG  + +
Sbjct: 480 QTYTFLITAFDGVQESEPVVVNIRVMDANDNTPTFPEISYDVYV----YTDMSPGDSVIQ 535

Query: 168 VEAADGDKGDRVTLSLRGPYEKM------FSIND-SGHISIV-DLSALNTSTIQLVVVAT 219
           + A D D+G    +S    YE +      F IN  +G +SI   +  +   T  L V A+
Sbjct: 536 LTAVDADEGSNGEIS----YEILVGGKGDFVINKTTGLVSIAPGVELIVGQTYALTVQAS 591

Query: 220 DTGNP 224
           D   P
Sbjct: 592 DNAPP 596



 Score = 47.8 bits (112), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 70/233 (30%), Positives = 103/233 (44%), Gaps = 26/233 (11%)

Query: 13   LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKP 72
            LVV A       R++  TL +           F+ + Y+V   ENLP     L +   K 
Sbjct: 792  LVVVATDGAVHPRHSTLTLYIKVLDIDDNSPVFTNSTYTVVVEENLPAGTSFLQIEA-KD 850

Query: 73   RDL--RVKYWL-SNDYGERFSISR-QGDISLMQCLDYET----EDSYRFTVYATD---TL 121
             DL   V Y + S +    F++    G++SL++ LDYE     E S  F   A D   T+
Sbjct: 851  VDLGANVSYRIRSPEVKHLFALHPFTGELSLLRSLDYEAFPDQEASITFLAEAFDIYGTM 910

Query: 122  MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDK----GD 177
                ATV + V ++ND+ P F    Y+  +      D   G+ I  V A D D       
Sbjct: 911  PPGIATVTVIVKDMNDYPPVFSKRIYKGMV----APDAVKGTPITTVYAEDADPPGMPAS 966

Query: 178  RVTL---SLRGPY-EKMFSIN-DSGHI-SIVDLSALNTSTIQLVVVATDTGNP 224
            RV      ++ PY   +F +  DSG + + V+L+   T+  +LVVVA D G P
Sbjct: 967  RVRYRVDDVQFPYPASIFDVEEDSGRVVTRVNLNEEPTTIFKLVVVAFDDGEP 1019


>gi|148699993|gb|EDL31940.1| protocadherin 15 [Mus musculus]
          Length = 1849

 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 61/195 (31%), Positives = 99/195 (50%), Gaps = 14/195 (7%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGER-FSISRQ-GDISLMQ 101
           +F +  YS+   E + +  +LL +         + Y + N   +R F++S   G +SL +
Sbjct: 526 RFPQLMYSLEVSEAMRIGAILLNLQATDREGDPITYAIENGDPQRVFNLSETTGILSLGK 585

Query: 102 CLDYETEDSYRFTVYATDTL--MTTSATVNISVVNVNDWDPRFRYPQYELFLP-HIPLAD 158
            LD E+ D Y   V A+D     T++ATVNI V +VND  P F     + +LP ++ + +
Sbjct: 586 ALDRESTDRYILIVTASDGRPDGTSTATVNIVVTDVNDNAPVF-----DPYLPRNLSVVE 640

Query: 159 LTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDSGHI-SIVDLSALNTSTIQLV 215
               + +G+V A D D G   +V  SL G +  +F I  +G I + V L+       +LV
Sbjct: 641 EEANAFVGQVRATDPDAGINGQVHYSL-GNFNNLFRITSNGSIYTAVKLNREARDHYELV 699

Query: 216 VVATDTGNPPRQASV 230
           VVATD    PR +++
Sbjct: 700 VVATDGAVHPRHSTL 714



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 65/245 (26%), Positives = 110/245 (44%), Gaps = 35/245 (14%)

Query: 6   DFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVL- 64
           DF Q   LV++A Q +     A A+L +     + +   F+   Y    LE+ PV   + 
Sbjct: 267 DFHQKFDLVIKAEQDNGHPLPAFASLHIEILDENNQSPYFTMPSYQGYILESAPVGATIS 326

Query: 65  --LTVTT-----------NKPRDLRVKYWLSNDYGERFSISRQG---DISLMQCLDYETE 108
             L +TT              +D  +  +L NDY   F+++  G    ++L+Q +D E +
Sbjct: 327 ESLNLTTPLRIVALDKDIEDTKDPELHLFL-NDYTSVFTVTPTGITRYLTLLQPVDREEQ 385

Query: 109 DSYRFTVYATDTLMTTS-ATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGK 167
            +Y F + A D +  +    VNI V++ ND  P F    Y++++      D++PG  + +
Sbjct: 386 QTYTFLITAFDGVQESEPVVVNIRVMDANDNTPTFPEISYDVYV----YTDMSPGDSVIQ 441

Query: 168 VEAADGDKGDRVTLSLRGPYEKM------FSIND-SGHISIV-DLSALNTSTIQLVVVAT 219
           + A D D+G    +S    YE +      F IN  +G +SI   +  +   T  L V A+
Sbjct: 442 LTAVDADEGSNGEIS----YEILVGGKGDFVINKTTGLVSIAPGVELIVGQTYALTVQAS 497

Query: 220 DTGNP 224
           D   P
Sbjct: 498 DNAPP 502



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 71/233 (30%), Positives = 104/233 (44%), Gaps = 26/233 (11%)

Query: 13  LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKP 72
           LVV A       R++  TL +           F+ + Y+V   ENLP     L +   K 
Sbjct: 698 LVVVATDGAVHPRHSTLTLYIKVLDIDDNSPVFTNSTYTVVVEENLPAGTSFLQIEA-KD 756

Query: 73  RDL--RVKYWL-SNDYGERFSISR-QGDISLMQCLDYET----EDSYRFTVYATD---TL 121
            DL   V Y + S +    F++    G++SL++ LDYE     E S  F V A D   T+
Sbjct: 757 VDLGANVSYRIRSPEVKHLFALHPFTGELSLLRSLDYEAFPDQEASITFLVEAFDIYGTM 816

Query: 122 MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDK----GD 177
               ATV + V ++ND+ P F    Y+  +      D   G+ I  V A D D       
Sbjct: 817 PPGIATVTVIVKDMNDYPPVFSKRIYKGMV----APDAVKGTPITTVYAEDADPPGMPAS 872

Query: 178 RVTL---SLRGPY-EKMFSIN-DSGHI-SIVDLSALNTSTIQLVVVATDTGNP 224
           RV      ++ PY   +F +  DSG + + V+L+   T+  +LVVVA D G P
Sbjct: 873 RVRYRVDDVQFPYPASIFDVEEDSGRVVTRVNLNEEPTTIFKLVVVAFDDGEP 925


>gi|85725299|gb|ABC79267.1| protocadherin-15-CD1 isoform 10 [Mus musculus]
          Length = 1913

 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 61/195 (31%), Positives = 99/195 (50%), Gaps = 14/195 (7%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGER-FSISRQ-GDISLMQ 101
           +F +  YS+   E + +  +LL +         + Y + N   +R F++S   G +SL +
Sbjct: 593 RFPQLMYSLEVSEAMRIGAILLNLQATDREGDPITYAIENGDPQRVFNLSETTGILSLGK 652

Query: 102 CLDYETEDSYRFTVYATDTL--MTTSATVNISVVNVNDWDPRFRYPQYELFLP-HIPLAD 158
            LD E+ D Y   V A+D     T++ATVNI V +VND  P F     + +LP ++ + +
Sbjct: 653 ALDRESTDRYILIVTASDGRPDGTSTATVNIVVTDVNDNAPVF-----DPYLPRNLSVVE 707

Query: 159 LTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDSGHI-SIVDLSALNTSTIQLV 215
               + +G+V A D D G   +V  SL G +  +F I  +G I + V L+       +LV
Sbjct: 708 EEANAFVGQVRATDPDAGINGQVHYSL-GNFNNLFRITSNGSIYTAVKLNREARDHYELV 766

Query: 216 VVATDTGNPPRQASV 230
           VVATD    PR +++
Sbjct: 767 VVATDGAVHPRHSTL 781



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 65/245 (26%), Positives = 110/245 (44%), Gaps = 35/245 (14%)

Query: 6   DFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVL- 64
           DF Q   LV++A Q +     A A+L +     + +   F+   Y    LE+ PV   + 
Sbjct: 334 DFHQKFDLVIKAEQDNGHPLPAFASLHIEILDENNQSPYFTMPSYQGYILESAPVGATIS 393

Query: 65  --LTVTT-----------NKPRDLRVKYWLSNDYGERFSISRQG---DISLMQCLDYETE 108
             L +TT              +D  +  +L NDY   F+++  G    ++L+Q +D E +
Sbjct: 394 ESLNLTTPLRIVALDKDIEDTKDPELHLFL-NDYTSVFTVTPTGITRYLTLLQPVDREEQ 452

Query: 109 DSYRFTVYATDTLMTTS-ATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGK 167
            +Y F + A D +  +    VNI V++ ND  P F    Y++++      D++PG  + +
Sbjct: 453 QTYTFLITAFDGVQESEPVVVNIRVMDANDNTPTFPEISYDVYV----YTDMSPGDSVIQ 508

Query: 168 VEAADGDKGDRVTLSLRGPYEKM------FSIND-SGHISIV-DLSALNTSTIQLVVVAT 219
           + A D D+G    +S    YE +      F IN  +G +SI   +  +   T  L V A+
Sbjct: 509 LTAVDADEGSNGEIS----YEILVGGKGDFVINKTTGLVSIAPGVELIVGQTYALTVQAS 564

Query: 220 DTGNP 224
           D   P
Sbjct: 565 DNAPP 569



 Score = 48.5 bits (114), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 70/233 (30%), Positives = 103/233 (44%), Gaps = 26/233 (11%)

Query: 13  LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKP 72
           LVV A       R++  TL +           F+ + Y+V   ENLP     L +   K 
Sbjct: 765 LVVVATDGAVHPRHSTLTLYIKVLDIDDNSPVFTNSTYTVVVEENLPAGTSFLQIEA-KD 823

Query: 73  RDL--RVKYWL-SNDYGERFSISR-QGDISLMQCLDYET----EDSYRFTVYATD---TL 121
            DL   V Y + S +    F++    G++SL++ LDYE     E S  F   A D   T+
Sbjct: 824 VDLGANVSYRIRSPEVKHLFALHPFTGELSLLRSLDYEAFPDQEASITFLAEAFDIYGTM 883

Query: 122 MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDK----GD 177
               ATV + V ++ND+ P F    Y+  +      D   G+ I  V A D D       
Sbjct: 884 PPGIATVTVIVKDMNDYPPVFSKRIYKGMV----APDAVKGTPITTVYAEDADPPGMPAS 939

Query: 178 RVTL---SLRGPY-EKMFSIN-DSGHI-SIVDLSALNTSTIQLVVVATDTGNP 224
           RV      ++ PY   +F +  DSG + + V+L+   T+  +LVVVA D G P
Sbjct: 940 RVRYRVDDVQFPYPASIFDVEEDSGRVVTRVNLNEEPTTIFKLVVVAFDDGEP 992


>gi|332244197|ref|XP_003271259.1| PREDICTED: cadherin-23-like isoform 1 [Nomascus leucogenys]
          Length = 1122

 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 59/195 (30%), Positives = 91/195 (46%), Gaps = 20/195 (10%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWLSNDYGERFSIS-RQGDISLM 100
           F +  Y  +  E++PV  ++LTVT           ++Y L  D   +F+I+   GDI ++
Sbjct: 162 FDQPSYQEAVFEDVPVGTIILTVTATDADSGNFALIEYSLG-DGESKFAINPTTGDIYVL 220

Query: 101 QCLDYETEDSYRFTVYATDT-------LMTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
             LD E +D Y  T  A D            S  V I V++VND  P+F  PQ+   +  
Sbjct: 221 SSLDREKKDHYILTALAKDNPGDVASNRRENSVQVVIQVLDVNDCRPQFSKPQFSTSV-- 278

Query: 154 IPLADLTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSIN-DSGHISIVDLSALNTS 210
               +   G+ +  + A D D+G    +T SL GP  + F ++ DSG ++       +  
Sbjct: 279 --YENEPAGTSVITMMATDQDEGHNGELTYSLEGPGVEAFHVDMDSGLVT-TQRPLQSYE 335

Query: 211 TIQLVVVATDTGNPP 225
              L VVATD G+PP
Sbjct: 336 RFNLTVVATDGGDPP 350



 Score = 39.3 bits (90), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 31/104 (29%), Positives = 48/104 (46%), Gaps = 8/104 (7%)

Query: 95  GDISLMQCLDYETEDSYRFTVYATDTLMTTSAT---VNISVVNVNDWDPRFRYPQYELFL 151
           G +   Q +DYE      FTV A+D      A    V + ++++ND +P F  P Y+  +
Sbjct: 112 GKVIANQTVDYEEVHWLNFTVRASDNGSPPRAAEIPVYLEIMDINDNNPIFDQPSYQEAV 171

Query: 152 PHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSIN 194
                 D+  G++I  V A D D G+   +    G  E  F+IN
Sbjct: 172 ----FEDVPVGTIILTVTATDADSGNFALIEYSLGDGESKFAIN 211



 Score = 38.1 bits (87), Expect = 8.2,   Method: Compositional matrix adjust.
 Identities = 36/124 (29%), Positives = 56/124 (45%), Gaps = 21/124 (16%)

Query: 125 SATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLS 182
           +A + ++V++VND  P+F+      +   I L   TPG+ +  V A D DKG    VT +
Sbjct: 36  NAKLTVNVLDVNDNTPQFKPFGITYYTERI-LEGATPGTTLIAVAAVDPDKGLNGLVTYT 94

Query: 183 LRGPYEKMFSINDSGHISIVDLSALNTSTIQLV-----------VVATDTGNPPRQASVP 231
           L         +   G++ + D SA      Q V           V A+D G+PPR A +P
Sbjct: 95  L-------LDLVPPGYVQLEDPSAGKVIANQTVDYEEVHWLNFTVRASDNGSPPRAAEIP 147

Query: 232 AIMH 235
             + 
Sbjct: 148 VYLE 151


>gi|218505729|ref|NP_001136212.1| protocadherin-15 isoform CD1-7 precursor [Mus musculus]
          Length = 1933

 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 61/195 (31%), Positives = 99/195 (50%), Gaps = 14/195 (7%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGER-FSISRQ-GDISLMQ 101
           +F +  YS+   E + +  +LL +         + Y + N   +R F++S   G +SL +
Sbjct: 615 RFPQLMYSLEVSEAMRIGAILLNLQATDREGDPITYAIENGDPQRVFNLSETTGILSLGK 674

Query: 102 CLDYETEDSYRFTVYATDTL--MTTSATVNISVVNVNDWDPRFRYPQYELFLP-HIPLAD 158
            LD E+ D Y   V A+D     T++ATVNI V +VND  P F     + +LP ++ + +
Sbjct: 675 ALDRESTDRYILIVTASDGRPDGTSTATVNIVVTDVNDNAPVF-----DPYLPRNLSVVE 729

Query: 159 LTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDSGHI-SIVDLSALNTSTIQLV 215
               + +G+V A D D G   +V  SL G +  +F I  +G I + V L+       +LV
Sbjct: 730 EEANAFVGQVRATDPDAGINGQVHYSL-GNFNNLFRITSNGSIYTAVKLNREARDHYELV 788

Query: 216 VVATDTGNPPRQASV 230
           VVATD    PR +++
Sbjct: 789 VVATDGAVHPRHSTL 803



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 65/245 (26%), Positives = 110/245 (44%), Gaps = 35/245 (14%)

Query: 6   DFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVL- 64
           DF Q   LV++A Q +     A A+L +     + +   F+   Y    LE+ PV   + 
Sbjct: 356 DFHQKFDLVIKAEQDNGHPLPAFASLHIEILDENNQSPYFTMPSYQGYILESAPVGATIS 415

Query: 65  --LTVTT-----------NKPRDLRVKYWLSNDYGERFSISRQG---DISLMQCLDYETE 108
             L +TT              +D  +  +L NDY   F+++  G    ++L+Q +D E +
Sbjct: 416 ESLNLTTPLRIVALDKDIEDTKDPELHLFL-NDYTSVFTVTPTGITRYLTLLQPVDREEQ 474

Query: 109 DSYRFTVYATDTLMTTS-ATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGK 167
            +Y F + A D +  +    VNI V++ ND  P F    Y++++      D++PG  + +
Sbjct: 475 QTYTFLITAFDGVQESEPVVVNIRVMDANDNTPTFPEISYDVYV----YTDMSPGDSVIQ 530

Query: 168 VEAADGDKGDRVTLSLRGPYEKM------FSIND-SGHISIV-DLSALNTSTIQLVVVAT 219
           + A D D+G    +S    YE +      F IN  +G +SI   +  +   T  L V A+
Sbjct: 531 LTAVDADEGSNGEIS----YEILVGGKGDFVINKTTGLVSIAPGVELIVGQTYALTVQAS 586

Query: 220 DTGNP 224
           D   P
Sbjct: 587 DNAPP 591



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 71/233 (30%), Positives = 104/233 (44%), Gaps = 26/233 (11%)

Query: 13   LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKP 72
            LVV A       R++  TL +           F+ + Y+V   ENLP     L +   K 
Sbjct: 787  LVVVATDGAVHPRHSTLTLYIKVLDIDDNSPVFTNSTYTVVVEENLPAGTSFLQIEA-KD 845

Query: 73   RDL--RVKYWL-SNDYGERFSISR-QGDISLMQCLDYET----EDSYRFTVYATD---TL 121
             DL   V Y + S +    F++    G++SL++ LDYE     E S  F V A D   T+
Sbjct: 846  VDLGANVSYRIRSPEVKHLFALHPFTGELSLLRSLDYEAFPDQEASITFLVEAFDIYGTM 905

Query: 122  MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDK----GD 177
                ATV + V ++ND+ P F    Y+  +      D   G+ I  V A D D       
Sbjct: 906  PPGIATVTVIVKDMNDYPPVFSKRIYKGMV----APDAVKGTPITTVYAEDADPPGMPAS 961

Query: 178  RVTL---SLRGPY-EKMFSIN-DSGHI-SIVDLSALNTSTIQLVVVATDTGNP 224
            RV      ++ PY   +F +  DSG + + V+L+   T+  +LVVVA D G P
Sbjct: 962  RVRYRVDDVQFPYPASIFDVEEDSGRVVTRVNLNEEPTTIFKLVVVAFDDGEP 1014


>gi|426229742|ref|XP_004023505.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin gamma-A5-like [Ovis
           aries]
          Length = 813

 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 62/197 (31%), Positives = 89/197 (45%), Gaps = 23/197 (11%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWLSND---YGERFSI-SRQGDI 97
           F+++EY VS  EN+ V   LLT+T   P +    ++ Y   N+     E F + S  G+I
Sbjct: 242 FTQSEYRVSVPENIAVGTRLLTLTATDPDEGINGKLTYSFRNEEDKISETFQLDSNLGEI 301

Query: 98  SLMQCLDYETEDSYRFTVYATD-TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
           S +  LDYE    Y   V A D   +  SA V I+V +VND  P       E+ L  +  
Sbjct: 302 STVHPLDYEESRFYDMEVVAQDGGALLASAKVLITVQDVNDNAP-------EVLLTSLSS 354

Query: 157 A---DLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDS--GHISIVDLSALNTST 211
               D  PG++I      DGD G+   +    P    F +  S   +  ++   AL+   
Sbjct: 355 TVSEDCLPGTIIALFSVHDGDSGENGEIVCSIPRNLPFKLEKSVDNYYHLLTTRALDREE 414

Query: 212 I---QLVVVATDTGNPP 225
           I    + V ATD GNPP
Sbjct: 415 ISDYNITVTATDCGNPP 431



 Score = 42.0 bits (97), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 66/274 (24%), Positives = 115/274 (41%), Gaps = 45/274 (16%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKP---RDLRVKYWLSNDYGERFSISR-------Q 94
           F    Y     EN P    + +V  + P    + +V Y L+ D  +   +S         
Sbjct: 452 FPHTSYYTYIPENNPRGISIFSVNAHDPDSGNNAQVTYALAEDKFQGTPLSSYVSINSDT 511

Query: 95  GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFL 151
           G +  ++  DYE     +  V A+D     ++++ ++++ +++ ND  P   YP     L
Sbjct: 512 GALYALRSFDYEQVRELQLWVTASDNGDPPLSSNVSLSLFILDQNDNAPEILYPA----L 567

Query: 152 P-----HIPLADLT--PGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-DSGHI- 199
           P      + LA  +  PG ++ KV A D D G    LS   L+     +F++   +G + 
Sbjct: 568 PVDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKASEPGLFTVGLHTGELR 627

Query: 200 ---SIVDLSALNTSTIQLVVVATDTGNPPRQASVPAIM----HFPEAIVQQASSKLNSGT 252
              +++D  A+  S   LVVV  D G PP  A+V   +      P+ +    S K ++  
Sbjct: 628 TARALLDRDAVKQS---LVVVVQDHGQPPLSATVTLTVAVADSIPDVLADLGSLKPSTDP 684

Query: 253 SSTVLII------LGVVLIVLGFVIILLILYIHK 280
             + L +        V  + L FVI LL L + +
Sbjct: 685 DDSGLTLYLVVAVASVSCVFLAFVIALLTLRLRR 718



 Score = 40.0 bits (92), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 42/143 (29%), Positives = 65/143 (45%), Gaps = 17/143 (11%)

Query: 101 QCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLA 157
           + LD E    Y  TV ATD     ++T   + + V ++ND  P F +  Y  ++P     
Sbjct: 408 RALDREEISDYNITVTATDCGNPPLSTENHIFLKVADINDNPPIFPHTSYYTYIPE---- 463

Query: 158 DLTPGSVIGKVEAADGDKGD--RVTLSLRG------PYEKMFSIN-DSGHI-SIVDLSAL 207
           +   G  I  V A D D G+  +VT +L        P     SIN D+G + ++      
Sbjct: 464 NNPRGISIFSVNAHDPDSGNNAQVTYALAEDKFQGTPLSSYVSINSDTGALYALRSFDYE 523

Query: 208 NTSTIQLVVVATDTGNPPRQASV 230
               +QL V A+D G+PP  ++V
Sbjct: 524 QVRELQLWVTASDNGDPPLSSNV 546


>gi|218505773|ref|NP_001136232.1| protocadherin-15 isoform CD3-2 precursor [Mus musculus]
          Length = 1677

 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 61/195 (31%), Positives = 99/195 (50%), Gaps = 14/195 (7%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGER-FSISRQ-GDISLMQ 101
           +F +  YS+   E + +  +LL +         + Y + N   +R F++S   G +SL +
Sbjct: 615 RFPQLMYSLEVSEAMRIGAILLNLQATDREGDPITYAIENGDPQRVFNLSETTGILSLGK 674

Query: 102 CLDYETEDSYRFTVYATDTL--MTTSATVNISVVNVNDWDPRFRYPQYELFLP-HIPLAD 158
            LD E+ D Y   V A+D     T++ATVNI V +VND  P F     + +LP ++ + +
Sbjct: 675 ALDRESTDRYILIVTASDGRPDGTSTATVNIVVTDVNDNAPVF-----DPYLPRNLSVVE 729

Query: 159 LTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDSGHI-SIVDLSALNTSTIQLV 215
               + +G+V A D D G   +V  SL G +  +F I  +G I + V L+       +LV
Sbjct: 730 EEANAFVGQVRATDPDAGINGQVHYSL-GNFNNLFRITSNGSIYTAVKLNREARDHYELV 788

Query: 216 VVATDTGNPPRQASV 230
           VVATD    PR +++
Sbjct: 789 VVATDGAVHPRHSTL 803



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 65/245 (26%), Positives = 110/245 (44%), Gaps = 35/245 (14%)

Query: 6   DFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVL- 64
           DF Q   LV++A Q +     A A+L +     + +   F+   Y    LE+ PV   + 
Sbjct: 356 DFHQKFDLVIKAEQDNGHPLPAFASLHIEILDENNQSPYFTMPSYQGYILESAPVGATIS 415

Query: 65  --LTVTT-----------NKPRDLRVKYWLSNDYGERFSISRQG---DISLMQCLDYETE 108
             L +TT              +D  +  +L NDY   F+++  G    ++L+Q +D E +
Sbjct: 416 ESLNLTTPLRIVALDKDIEDTKDPELHLFL-NDYTSVFTVTPTGITRYLTLLQPVDREEQ 474

Query: 109 DSYRFTVYATDTLMTTS-ATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGK 167
            +Y F + A D +  +    VNI V++ ND  P F    Y++++      D++PG  + +
Sbjct: 475 QTYTFLITAFDGVQESEPVVVNIRVMDANDNTPTFPEISYDVYV----YTDMSPGDSVIQ 530

Query: 168 VEAADGDKGDRVTLSLRGPYEKM------FSIND-SGHISIV-DLSALNTSTIQLVVVAT 219
           + A D D+G    +S    YE +      F IN  +G +SI   +  +   T  L V A+
Sbjct: 531 LTAVDADEGSNGEIS----YEILVGGKGDFVINKTTGLVSIAPGVELIVGQTYALTVQAS 586

Query: 220 DTGNP 224
           D   P
Sbjct: 587 DNAPP 591



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 71/233 (30%), Positives = 104/233 (44%), Gaps = 26/233 (11%)

Query: 13   LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKP 72
            LVV A       R++  TL +           F+ + Y+V   ENLP     L +   K 
Sbjct: 787  LVVVATDGAVHPRHSTLTLYIKVLDIDDNSPVFTNSTYTVVVEENLPAGTSFLQIEA-KD 845

Query: 73   RDL--RVKYWL-SNDYGERFSISR-QGDISLMQCLDYET----EDSYRFTVYATD---TL 121
             DL   V Y + S +    F++    G++SL++ LDYE     E S  F V A D   T+
Sbjct: 846  VDLGANVSYRIRSPEVKHLFALHPFTGELSLLRSLDYEAFPDQEASITFLVEAFDIYGTM 905

Query: 122  MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDK----GD 177
                ATV + V ++ND+ P F    Y+  +      D   G+ I  V A D D       
Sbjct: 906  PPGIATVTVIVKDMNDYPPVFSKRIYKGMV----APDAVKGTPITTVYAEDADPPGMPAS 961

Query: 178  RVTL---SLRGPY-EKMFSIN-DSGHI-SIVDLSALNTSTIQLVVVATDTGNP 224
            RV      ++ PY   +F +  DSG + + V+L+   T+  +LVVVA D G P
Sbjct: 962  RVRYRVDDVQFPYPASIFDVEEDSGRVVTRVNLNEEPTTIFKLVVVAFDDGEP 1014


>gi|119574811|gb|EAW54426.1| cadherin-like 23, isoform CRA_a [Homo sapiens]
 gi|119574812|gb|EAW54427.1| cadherin-like 23, isoform CRA_a [Homo sapiens]
          Length = 1781

 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 59/195 (30%), Positives = 90/195 (46%), Gaps = 20/195 (10%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWLSNDYGERFSIS-RQGDISLM 100
            F +  Y  +  E++PV  ++LTVT           ++Y L  D   +F+I+   GDI ++
Sbjct: 829  FDQPSYQEAVFEDVPVGTIILTVTATDADSGNFALIEYSLG-DGESKFAINPTTGDIYVL 887

Query: 101  QCLDYETEDSYRFTVYATDT-------LMTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
              LD E +D Y  T  A D            S  V I V++VND  P+F  PQ+   +  
Sbjct: 888  SSLDREKKDHYILTALAKDNPGDVASNRRENSVQVVIQVLDVNDCRPQFSKPQFSTSV-- 945

Query: 154  IPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIN-DSGHISIVDLSALNTS 210
                +   G+ +  + A D D+G    +T SL GP  + F ++ DSG ++       +  
Sbjct: 946  --YENEPAGTSVITMMATDQDEGPNGELTYSLEGPGVEAFHVDMDSGLVT-TQRPLQSYE 1002

Query: 211  TIQLVVVATDTGNPP 225
               L VVATD G PP
Sbjct: 1003 KFSLTVVATDGGEPP 1017



 Score = 46.2 bits (108), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 57/215 (26%), Positives = 95/215 (44%), Gaps = 36/215 (16%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVT-TNKPRDL--RVKYWLSNDYGERFSIS------RQG 95
           FS    +V  LEN P  + +L VT T++   L   + Y +     +RF I       R G
Sbjct: 496 FSPATLTVHLLENCPPGFSVLQVTATDEDSGLNGELVYRIEAGAQDRFLIHLVTGVIRVG 555

Query: 96  DISLMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLP 152
           + ++    D E ++SYR TV ATD     ++ +A V I + ++ND  P F  P   + + 
Sbjct: 556 NATI----DREEQESYRLTVVATDRGTVPLSGTAIVTILIDDINDSRPEFLNPIQTVSV- 610

Query: 153 HIPLADLTPGSVIGKVEAADGDKGDRVTLSLRG------------PYEKMFSIN-DSGHI 199
              L    PG+VI  + A D D   ++   + G              E  F++N ++G +
Sbjct: 611 ---LESAEPGTVIANITAIDHDLNPKLEYHIVGIVAKDDTDRLVPNQEDAFAVNINTGSV 667

Query: 200 SI---VDLSALNTSTIQLVVVATDTGNPPRQASVP 231
            +   ++   + T  + L V+   +  P R  SVP
Sbjct: 668 MVKSPMNRELVATYEVTLSVIDNASDLPERSVSVP 702



 Score = 41.2 bits (95), Expect = 0.81,   Method: Compositional matrix adjust.
 Identities = 33/107 (30%), Positives = 49/107 (45%), Gaps = 8/107 (7%)

Query: 92  SRQGDISLMQCLDYETEDSYRFTVYATDTLMTTSAT---VNISVVNVNDWDPRFRYPQYE 148
           S  G +   Q +DYE      FTV A+D      A    V + +V++ND +P F  P Y+
Sbjct: 776 SSAGKVIANQTVDYEEVHWLNFTVRASDNGSPPRAAEIPVYLEIVDINDNNPIFDQPSYQ 835

Query: 149 LFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSIN 194
             +      D+  G++I  V A D D G+   +    G  E  F+IN
Sbjct: 836 EAV----FEDVPVGTIILTVTATDADSGNFALIEYSLGDGESKFAIN 878



 Score = 39.7 bits (91), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 36/125 (28%), Positives = 57/125 (45%), Gaps = 21/125 (16%)

Query: 125 SATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLS 182
           +A + ++V++VND  P+F+      ++  I L   TPG+ +  V A D DKG    VT +
Sbjct: 703 NAKLTVNVLDVNDNTPQFKPFGITYYMERI-LEGATPGTTLIAVAAVDPDKGLNGLVTYT 761

Query: 183 LRGPYEKMFSINDSGHISIVDLSALNTSTIQLV-----------VVATDTGNPPRQASVP 231
           L         +   G++ + D SA      Q V           V A+D G+PPR A +P
Sbjct: 762 L-------LDLVPPGYVQLEDSSAGKVIANQTVDYEEVHWLNFTVRASDNGSPPRAAEIP 814

Query: 232 AIMHF 236
             +  
Sbjct: 815 VYLEI 819


>gi|73959343|ref|XP_537042.2| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 2 isoform 1
           [Canis lupus familiaris]
          Length = 2926

 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 69/219 (31%), Positives = 101/219 (46%), Gaps = 22/219 (10%)

Query: 25  RYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWL 81
           R ALATL +    T+  +  F + EY  S  ENL V Y +LTV     + P +  + Y L
Sbjct: 272 RSALATLTILVTDTNDHDPVFEQQEYKESLRENLEVGYEVLTVRATDGDAPPNANILYRL 331

Query: 82  SNDYG----ERFSIS-RQGDISLMQCLDYETEDSYRFTVYATDT-----LMTTSATVNIS 131
               G    E F I  R G I     +D E  +SY+ TV A+D        + +A V +S
Sbjct: 332 LEGPGGSPSEIFEIDPRSGVIRTRGPVDREEVESYQLTVEASDQGRDPGPRSATAAVFLS 391

Query: 132 VVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYE 188
           V + ND  P+F   +Y + +      D+TPG+ + +V A+D DKG    +    + G   
Sbjct: 392 VEDDNDNAPQFSEKRYVVQV----REDVTPGAPVLRVTASDRDKGSNALVHYSIMSGNAR 447

Query: 189 KMFSIN-DSGHISIVD-LSALNTSTIQLVVVATDTGNPP 225
             F ++  +G + +V  L    T    L V A D G PP
Sbjct: 448 GQFYLDAQTGALDVVSPLDYETTKEYTLRVRAQDGGRPP 486



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 49/171 (28%), Positives = 81/171 (47%), Gaps = 15/171 (8%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGERFSIS---RQGDIS 98
           F    +  + LE++P+ Y++L V     +   + R++Y L+   G  F  +     G IS
Sbjct: 508 FVSTPFQATVLESVPLGYLVLHVQAIDADAGDNARLEYRLAG-VGHDFPFAINNGTGWIS 566

Query: 99  LMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIP 155
           +   LD E  D Y F V A D    ++T SA+V++++++VND +P F  P+Y + L    
Sbjct: 567 VAAELDREEVDFYSFGVEARDHGTPVLTASASVSVTILDVNDNNPTFTQPEYTVRLNE-- 624

Query: 156 LADLTPGSVIGKVEAADGDKGDRVTLSL-RGPYEKMFSINDSGHISIVDLS 205
             D   G+ +  V A D D    +T  +  G     FSI       +V L+
Sbjct: 625 --DAAVGTSVVTVSAVDRDAHSVITYQITSGNTRNRFSITSQSGGGLVSLA 673



 Score = 44.7 bits (104), Expect = 0.068,   Method: Compositional matrix adjust.
 Identities = 51/189 (26%), Positives = 86/189 (45%), Gaps = 14/189 (7%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRDLR--VKYWL-SNDYGERFSISRQ---GDIS 98
           F++ EY+V   E+  V   ++TV+    RD    + Y + S +   RFSI+ Q   G +S
Sbjct: 613 FTQPEYTVRLNEDAAVGTSVVTVSAVD-RDAHSVITYQITSGNTRNRFSITSQSGGGLVS 671

Query: 99  LMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLAD 158
           L   LDY+ E  Y   V A+D     +A V ++V + N   P F+   Y + +      D
Sbjct: 672 LALPLDYKLERQYVLAVTASDGTRQDTAQVVVNVTDANTHRPVFQSSHYTVNVNE----D 727

Query: 159 LTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSINDSGHISI-VDLSALNTSTIQLV 215
              G+ +  + A D D G+  R+T  +     +     D+G ++   +L   +  +  L 
Sbjct: 728 RPAGTTVVLISATDEDTGENARITYFMEDSIPQFRIDADTGAVTTQAELDYEDQVSYTLA 787

Query: 216 VVATDTGNP 224
           + A D G P
Sbjct: 788 ITARDNGIP 796



 Score = 44.3 bits (103), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 40/149 (26%), Positives = 69/149 (46%), Gaps = 10/149 (6%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWL-SNDYGERFSIS-RQGDISL 99
            F ++E+ V   EN P+   +  VT   P +    ++ Y +   +  E F +    G+++ 
Sbjct: 924  FEQDEFDVFVEENSPIGLAVARVTATDPDEGTNAQIMYQIVEGNIPEVFQLDIFSGELTA 983

Query: 100  MQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPH--IPLA 157
            +  LDYE    Y   + AT   + + ATV++ +++ ND  P      +E+   +     +
Sbjct: 984  LVDLDYEDRPEYILVIQATSAPLVSRATVHVRLLDRNDNPPVLG--NFEILFNNYVTNRS 1041

Query: 158  DLTPGSVIGKVEAADGDKGDRVTLSL-RG 185
               PG  IG+V A D D  D +T S  RG
Sbjct: 1042 SSFPGGAIGRVPAHDPDVSDSLTYSFERG 1070


>gi|218505724|ref|NP_001136210.1| protocadherin-15 isoform CD1-8 precursor [Mus musculus]
          Length = 1896

 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 61/195 (31%), Positives = 99/195 (50%), Gaps = 14/195 (7%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGER-FSISRQ-GDISLMQ 101
           +F +  YS+   E + +  +LL +         + Y + N   +R F++S   G +SL +
Sbjct: 578 RFPQLMYSLEVSEAMRIGAILLNLQATDREGDPITYAIENGDPQRVFNLSETTGILSLGK 637

Query: 102 CLDYETEDSYRFTVYATDTL--MTTSATVNISVVNVNDWDPRFRYPQYELFLP-HIPLAD 158
            LD E+ D Y   V A+D     T++ATVNI V +VND  P F     + +LP ++ + +
Sbjct: 638 ALDRESTDRYILIVTASDGRPDGTSTATVNIVVTDVNDNAPVF-----DPYLPRNLSVVE 692

Query: 159 LTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDSGHI-SIVDLSALNTSTIQLV 215
               + +G+V A D D G   +V  SL G +  +F I  +G I + V L+       +LV
Sbjct: 693 EEANAFVGQVRATDPDAGINGQVHYSL-GNFNNLFRITSNGSIYTAVKLNREARDHYELV 751

Query: 216 VVATDTGNPPRQASV 230
           VVATD    PR +++
Sbjct: 752 VVATDGAVHPRHSTL 766



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 65/245 (26%), Positives = 110/245 (44%), Gaps = 35/245 (14%)

Query: 6   DFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVL- 64
           DF Q   LV++A Q +     A A+L +     + +   F+   Y    LE+ PV   + 
Sbjct: 319 DFHQKFDLVIKAEQDNGHPLPAFASLHIEILDENNQSPYFTMPSYQGYILESAPVGATIS 378

Query: 65  --LTVTT-----------NKPRDLRVKYWLSNDYGERFSISRQG---DISLMQCLDYETE 108
             L +TT              +D  +  +L NDY   F+++  G    ++L+Q +D E +
Sbjct: 379 ESLNLTTPLRIVALDKDIEDTKDPELHLFL-NDYTSVFTVTPTGITRYLTLLQPVDREEQ 437

Query: 109 DSYRFTVYATDTLMTTS-ATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGK 167
            +Y F + A D +  +    VNI V++ ND  P F    Y++++      D++PG  + +
Sbjct: 438 QTYTFLITAFDGVQESEPVVVNIRVMDANDNTPTFPEISYDVYV----YTDMSPGDSVIQ 493

Query: 168 VEAADGDKGDRVTLSLRGPYEKM------FSIND-SGHISIV-DLSALNTSTIQLVVVAT 219
           + A D D+G    +S    YE +      F IN  +G +SI   +  +   T  L V A+
Sbjct: 494 LTAVDADEGSNGEIS----YEILVGGKGDFVINKTTGLVSIAPGVELIVGQTYALTVQAS 549

Query: 220 DTGNP 224
           D   P
Sbjct: 550 DNAPP 554



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 71/233 (30%), Positives = 104/233 (44%), Gaps = 26/233 (11%)

Query: 13  LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKP 72
           LVV A       R++  TL +           F+ + Y+V   ENLP     L +   K 
Sbjct: 750 LVVVATDGAVHPRHSTLTLYIKVLDIDDNSPVFTNSTYTVVVEENLPAGTSFLQIEA-KD 808

Query: 73  RDL--RVKYWL-SNDYGERFSISR-QGDISLMQCLDYET----EDSYRFTVYATD---TL 121
            DL   V Y + S +    F++    G++SL++ LDYE     E S  F V A D   T+
Sbjct: 809 VDLGANVSYRIRSPEVKHLFALHPFTGELSLLRSLDYEAFPDQEASITFLVEAFDIYGTM 868

Query: 122 MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDK----GD 177
               ATV + V ++ND+ P F    Y+  +      D   G+ I  V A D D       
Sbjct: 869 PPGIATVTVIVKDMNDYPPVFSKRIYKGMV----APDAVKGTPITTVYAEDADPPGMPAS 924

Query: 178 RVTL---SLRGPY-EKMFSIN-DSGHI-SIVDLSALNTSTIQLVVVATDTGNP 224
           RV      ++ PY   +F +  DSG + + V+L+   T+  +LVVVA D G P
Sbjct: 925 RVRYRVDDVQFPYPASIFDVEEDSGRVVTRVNLNEEPTTIFKLVVVAFDDGEP 977


>gi|218505715|ref|NP_001136207.1| protocadherin-15 isoform CD1-2 precursor [Mus musculus]
          Length = 1938

 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 61/195 (31%), Positives = 99/195 (50%), Gaps = 14/195 (7%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGER-FSISRQ-GDISLMQ 101
           +F +  YS+   E + +  +LL +         + Y + N   +R F++S   G +SL +
Sbjct: 615 RFPQLMYSLEVSEAMRIGAILLNLQATDREGDPITYAIENGDPQRVFNLSETTGILSLGK 674

Query: 102 CLDYETEDSYRFTVYATDTL--MTTSATVNISVVNVNDWDPRFRYPQYELFLP-HIPLAD 158
            LD E+ D Y   V A+D     T++ATVNI V +VND  P F     + +LP ++ + +
Sbjct: 675 ALDRESTDRYILIVTASDGRPDGTSTATVNIVVTDVNDNAPVF-----DPYLPRNLSVVE 729

Query: 159 LTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDSGHI-SIVDLSALNTSTIQLV 215
               + +G+V A D D G   +V  SL G +  +F I  +G I + V L+       +LV
Sbjct: 730 EEANAFVGQVRATDPDAGINGQVHYSL-GNFNNLFRITSNGSIYTAVKLNREARDHYELV 788

Query: 216 VVATDTGNPPRQASV 230
           VVATD    PR +++
Sbjct: 789 VVATDGAVHPRHSTL 803



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 65/245 (26%), Positives = 110/245 (44%), Gaps = 35/245 (14%)

Query: 6   DFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVL- 64
           DF Q   LV++A Q +     A A+L +     + +   F+   Y    LE+ PV   + 
Sbjct: 356 DFHQKFDLVIKAEQDNGHPLPAFASLHIEILDENNQSPYFTMPSYQGYILESAPVGATIS 415

Query: 65  --LTVTT-----------NKPRDLRVKYWLSNDYGERFSISRQG---DISLMQCLDYETE 108
             L +TT              +D  +  +L NDY   F+++  G    ++L+Q +D E +
Sbjct: 416 ESLNLTTPLRIVALDKDIEDTKDPELHLFL-NDYTSVFTVTPTGITRYLTLLQPVDREEQ 474

Query: 109 DSYRFTVYATDTLMTTS-ATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGK 167
            +Y F + A D +  +    VNI V++ ND  P F    Y++++      D++PG  + +
Sbjct: 475 QTYTFLITAFDGVQESEPVVVNIRVMDANDNTPTFPEISYDVYV----YTDMSPGDSVIQ 530

Query: 168 VEAADGDKGDRVTLSLRGPYEKM------FSIND-SGHISIV-DLSALNTSTIQLVVVAT 219
           + A D D+G    +S    YE +      F IN  +G +SI   +  +   T  L V A+
Sbjct: 531 LTAVDADEGSNGEIS----YEILVGGKGDFVINKTTGLVSIAPGVELIVGQTYALTVQAS 586

Query: 220 DTGNP 224
           D   P
Sbjct: 587 DNAPP 591



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 71/233 (30%), Positives = 104/233 (44%), Gaps = 26/233 (11%)

Query: 13   LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKP 72
            LVV A       R++  TL +           F+ + Y+V   ENLP     L +   K 
Sbjct: 787  LVVVATDGAVHPRHSTLTLYIKVLDIDDNSPVFTNSTYTVVVEENLPAGTSFLQIEA-KD 845

Query: 73   RDL--RVKYWL-SNDYGERFSISR-QGDISLMQCLDYET----EDSYRFTVYATD---TL 121
             DL   V Y + S +    F++    G++SL++ LDYE     E S  F V A D   T+
Sbjct: 846  VDLGANVSYRIRSPEVKHLFALHPFTGELSLLRSLDYEAFPDQEASITFLVEAFDIYGTM 905

Query: 122  MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDK----GD 177
                ATV + V ++ND+ P F    Y+  +      D   G+ I  V A D D       
Sbjct: 906  PPGIATVTVIVKDMNDYPPVFSKRIYKGMV----APDAVKGTPITTVYAEDADPPGMPAS 961

Query: 178  RVTL---SLRGPY-EKMFSIN-DSGHI-SIVDLSALNTSTIQLVVVATDTGNP 224
            RV      ++ PY   +F +  DSG + + V+L+   T+  +LVVVA D G P
Sbjct: 962  RVRYRVDDVQFPYPASIFDVEEDSGRVVTRVNLNEEPTTIFKLVVVAFDDGEP 1014


>gi|240975980|ref|XP_002402241.1| protocadherin-16, putative [Ixodes scapularis]
 gi|215491130|gb|EEC00771.1| protocadherin-16, putative [Ixodes scapularis]
          Length = 2493

 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 65/220 (29%), Positives = 98/220 (44%), Gaps = 29/220 (13%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGE----RFSI-SRQGD 96
           F + +Y V+ LE+L  N   L V+    +   + R+ + L    G+    +F I    G 
Sbjct: 334 FERPQYKVNVLESLSANSQFLQVSATDKDTGNNARLTFKLLEGPGQQQASKFGIFPNNGF 393

Query: 97  ISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
           + L + LD ET D +   V   D     ++++ATV + V++ ND DP F  P +E F+P 
Sbjct: 394 LYLKEQLDRETADHHTLAVEVVDNGSPALSSTATVQVRVLDANDNDPMFEKPVFEFFVPE 453

Query: 154 IPLADLTPGSVIGKVEAADGDKGDRVTL--SLRGPYEKMFSIND-SGHI-SIVDLSALNT 209
               D   G  +G V A D D G    L  SL       F IN  +G I + V L   + 
Sbjct: 454 ----DAEKGRRVGTVSAHDKDAGSNAALRYSLVNA-NGSFQINPVTGEIFTKVLLDRESK 508

Query: 210 STIQLVVVATDTGNPPRQASVPAIMHFPEAIVQQASSKLN 249
           S+ ++     D G PPR         F  AIV+   + +N
Sbjct: 509 SSYEVTAEVHDQGTPPR---------FHRAIVKVVVADVN 539



 Score = 55.5 bits (132), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 61/186 (32%), Positives = 80/186 (43%), Gaps = 15/186 (8%)

Query: 52   VSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYG----ERFSISR-QGDISLMQC-LDY 105
            VS  E   V  VL T+T N      V  +   D G      F++ R  G I+L    LD+
Sbjct: 1602 VSISEGAEVGSVLTTITANDVDTHPVLTYTFADVGGGSASLFAVDRFSGRITLAGGPLDF 1661

Query: 106  ETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVI 165
            E +  Y+  +  +DT       V + V +VND  PRF  P Y   LP    A L  GS I
Sbjct: 1662 ERQSLYQLRLRVSDTAHMAETLVTVHVTDVNDNSPRFTQPSYHAILPE--SAGL--GSSI 1717

Query: 166  GKVEAADGDKGD--RVTLSLRGPYEKMFSINDSGHISIVDLSAL---NTSTIQLVVVATD 220
              V A D D G+  ++  SL   Y   F IN++      + S         +QL V ATD
Sbjct: 1718 ITVNATDLDSGNNAQIWYSLGESYSIGFYINENTGTIYTNKSLSYDPKKPVVQLTVRATD 1777

Query: 221  TGNPPR 226
             G P R
Sbjct: 1778 RGVPSR 1783



 Score = 54.7 bits (130), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 46/158 (29%), Positives = 75/158 (47%), Gaps = 14/158 (8%)

Query: 45  FSKNEYSVSALENLPVN---YVLLTVTTNKPRDLRVKYWLSNDYGERFSI-SRQGDISLM 100
           F      +S  EN+ V+   YV      +  R+  V+Y L+ +    F + ++ G + L 
Sbjct: 230 FESPSLKISIPENVEVDTPTYVAHARDADGGRNGAVRYALAENPDGAFHVGAKSGSLMLR 289

Query: 101 QCLDYETEDSYRFTVYATDTL---MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLA 157
           Q LDYE    Y   + ATD     ++++ T+ + V +VND  P F  PQY++ +    L 
Sbjct: 290 QSLDYEVRQKYGLVLTATDGGSPPLSSNMTLLVEVQDVNDNAPTFERPQYKVNV----LE 345

Query: 158 DLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFS 192
            L+  S   +V A D D G+   L+   L GP ++  S
Sbjct: 346 SLSANSQFLQVSATDKDTGNNARLTFKLLEGPGQQQAS 383



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 52/206 (25%), Positives = 93/206 (45%), Gaps = 14/206 (6%)

Query: 6    DFLQPITLVVRAIQYDNQDRYA-LATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVL 64
            D +    LVVRA+  D +   + L ++ +     +     F    Y+    E+ P+   +
Sbjct: 1975 DTVPEFKLVVRAMDSDLESPLSSLVSVFIRIKDENDNSPHFPLAMYTEFVEESSPIGTTV 2034

Query: 65   LTV-TTNKPRDL--RVKYWLSNDYG-ERFSISRQ-GDISLMQCLDYETEDSYRFTVYATD 119
             T    +  R L  ++ Y ++   G ++F I R  G I+     DYE+++ Y FT+ ATD
Sbjct: 2035 FTARAMDADRGLYGKLNYTMAEGEGRDKFRIDRDTGVITTEVVFDYESKNRYYFTILATD 2094

Query: 120  TLMT-TSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG-- 176
                  +  V + V + +++ P FR   Y   +P     D   G ++G+V+A D D+G  
Sbjct: 2095 AGGKYATVQVQVDVASKDEYPPVFRQKMYRFAVP----GDAPAGHIVGRVQATDVDQGPD 2150

Query: 177  DRVTLSLRGPYEKMFSINDSGHISIV 202
             ++   +RG     F IN +  +  V
Sbjct: 2151 GKIVYQIRGG-SAHFRINGTSGVVTV 2175



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 62/227 (27%), Positives = 103/227 (45%), Gaps = 22/227 (9%)

Query: 11   ITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTN 70
            + L VRA       R  +A + +  A  +    +F ++ Y  S  E+ P    ++ V+  
Sbjct: 1769 VQLTVRATDRGVPSRSTVAAVRIQIADVNNNAPRFLESAYRASIREDTPPGTTVIRVSAT 1828

Query: 71   K---PRD-LRVKYW-LSNDYGERFSISRQ-GDISLMQCLDYETEDSYRFTVYATDT---L 121
                 RD   + Y  +  + G  F +S   G++ L + LD E    Y   V A D     
Sbjct: 1829 DLDISRDNHNINYRIMDGNAGGTFVVSGSLGEVILAKPLDREKVMMYSLKVVAIDRGTPS 1888

Query: 122  MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTL 181
            M  +A V IS+ +VND+ P F    YE+F+  +     TPG+V+ +V A D D+G    +
Sbjct: 1889 MNATAQVIISIDDVNDYAPTFNQTYYEVFISEM----ATPGAVVIQVSATDKDEGRHAQV 1944

Query: 182  SL---RGPYEKMFSIN-DSGHISIVDLSALNTSTI---QLVVVATDT 221
                  G  +  FS++  +G I++     L+  T+   +LVV A D+
Sbjct: 1945 KYDITSGNEDNKFSLDPKTGTITV--RGKLDYDTVPEFKLVVRAMDS 1989



 Score = 52.4 bits (124), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 59/200 (29%), Positives = 94/200 (47%), Gaps = 19/200 (9%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGERFSI-SRQGDISL 99
            QF  +EYS +  E+ PVN  +L V     ++  +  V Y L N+    F+I S  G I+ 
Sbjct: 1173 QFEHSEYSATVPEDAPVNTTVLVVKATDHDEGSNGHVTYSLGNETASLFNIDSDTGVITT 1232

Query: 100  MQCLDYETEDSYRFTVYATDT----LMTTSATVNISVVNVNDWDPRF-RYPQYELFLPHI 154
                D E +  Y F V A+D+         + V+++VV+VND  P F +YP       H 
Sbjct: 1233 AGVFDREKKARYMFEVRASDSGKYDARWERSVVHVTVVDVNDNRPTFAKYPYVAKVNAH- 1291

Query: 155  PLADLTPGSVIGKVEAADGDKGDRVTL--SLRGP-YEKMFSIN-DSGHISIV-DLSALNT 209
                   G+ +  V+AAD D G    +  S   P     F ++ D+G +++   L + N 
Sbjct: 1292 ----AHSGTQVAYVQAADADDGPNADIFYSFANPAMSHKFHLDPDTGLVTVAGSLLSDNG 1347

Query: 210  STIQLVVVATDTGNPPRQAS 229
              I + +VA D G PP+ ++
Sbjct: 1348 RVIHVDIVAKDRGRPPKMST 1367



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 59/203 (29%), Positives = 91/203 (44%), Gaps = 17/203 (8%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSND-----YGERFSI-SRQGDI 97
            +F +  Y  +  E+ PV   +LTV     +DL     LS        G +F++ +R G +
Sbjct: 967  RFLRERYLSNVSESAPVGTSVLTVHATD-KDLGASTNLSYSIPQGVAGNKFTVNARTGVV 1025

Query: 98   SLMQCLDYETEDSYRFTVYATD-TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
                 LD E   +Y F VY TD +    +  V +SV++VND  P+FR   + L++P    
Sbjct: 1026 ETAGPLDREDTATYEFAVYVTDGSFHFDTCVVVVSVLDVNDHSPKFRDSCHPLYVP---- 1081

Query: 157  ADLTPGSVIGKVEAADGDKG---DRVTLSLRGPYEKMFSIND-SGHISIVDLSALNTSTI 212
             +     VI  + A+D D G   D V     G     F ++  +G +S   L     S  
Sbjct: 1082 -ENNELKVIHTLVASDEDVGPNADIVYSITDGNAGNKFGVDSRTGRLSSRPLDREMQSQF 1140

Query: 213  QLVVVATDTGNPPRQASVPAIMH 235
             L V+A D G+PPR  +    +H
Sbjct: 1141 HLTVLARDRGSPPRSGTCNMTVH 1163



 Score = 39.7 bits (91), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 48/168 (28%), Positives = 72/168 (42%), Gaps = 14/168 (8%)

Query: 77  VKYWLSNDYGERFSISR-QGDISLMQCLDYETEDSYRFTVYATDTLMTTS---ATVNISV 132
           ++Y L N  G  F I+   G+I     LD E++ SY  T    D         A V + V
Sbjct: 477 LRYSLVNANGS-FQINPVTGEIFTKVLLDRESKSSYEVTAEVHDQGTPPRFHRAIVKVVV 535

Query: 133 VNVNDWDPRFRYPQYELFLPHIPLADLTP-GSVIGKVEAADGDKGDR--VTLSLRGPYEK 189
            +VND  P F  P   L    + + +  P G+ + +V+A D D+G    V   +R     
Sbjct: 536 ADVNDNAPVFVEPAETL----VGVREEQPVGTELAQVQAVDADEGKNADVFYEIRADGSP 591

Query: 190 MFSINDSGHISIVD--LSALNTSTIQLVVVATDTGNPPRQASVPAIMH 235
            F+I+ +  +      L         LVVVA D G PP +A +   +H
Sbjct: 592 AFAIHRTSGVVTTRTVLDHEQQDYYSLVVVARDGGAPPMEARLSLKVH 639


>gi|85725297|gb|ABC79266.1| protocadherin-15-CD1 isoform 7 [Mus musculus]
          Length = 1933

 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 61/195 (31%), Positives = 99/195 (50%), Gaps = 14/195 (7%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGER-FSISRQ-GDISLMQ 101
           +F +  YS+   E + +  +LL +         + Y + N   +R F++S   G +SL +
Sbjct: 615 RFPQLMYSLEVSEAMRIGAILLNLQATDREGDPITYAIENGDPQRVFNLSETTGILSLGK 674

Query: 102 CLDYETEDSYRFTVYATDTL--MTTSATVNISVVNVNDWDPRFRYPQYELFLP-HIPLAD 158
            LD E+ D Y   V A+D     T++ATVNI V +VND  P F     + +LP ++ + +
Sbjct: 675 ALDRESTDRYILIVTASDGRPDGTSTATVNIVVTDVNDNAPVF-----DPYLPRNLSVVE 729

Query: 159 LTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDSGHI-SIVDLSALNTSTIQLV 215
               + +G+V A D D G   +V  SL G +  +F I  +G I + V L+       +LV
Sbjct: 730 EEANAFVGQVRATDPDAGINGQVHYSL-GNFNNLFRITSNGSIYTAVKLNREARDHYELV 788

Query: 216 VVATDTGNPPRQASV 230
           VVATD    PR +++
Sbjct: 789 VVATDGAVHPRHSTL 803



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 65/245 (26%), Positives = 110/245 (44%), Gaps = 35/245 (14%)

Query: 6   DFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVL- 64
           DF Q   LV++A Q +     A A+L +     + +   F+   Y    LE+ PV   + 
Sbjct: 356 DFHQKFDLVIKAEQDNGHPLPAFASLHIEILDENNQSPYFTMPSYQGYILESAPVGATIS 415

Query: 65  --LTVTT-----------NKPRDLRVKYWLSNDYGERFSISRQG---DISLMQCLDYETE 108
             L +TT              +D  +  +L NDY   F+++  G    ++L+Q +D E +
Sbjct: 416 ESLNLTTPLRIVALDKDIEDTKDPELHLFL-NDYTSVFTVTPTGITRYLTLLQPVDREEQ 474

Query: 109 DSYRFTVYATDTLMTTS-ATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGK 167
            +Y F + A D +  +    VNI V++ ND  P F    Y++++      D++PG  + +
Sbjct: 475 QTYTFLITAFDGVQESEPVVVNIRVMDANDNTPTFPEISYDVYV----YTDMSPGDSVIQ 530

Query: 168 VEAADGDKGDRVTLSLRGPYEKM------FSIND-SGHISIV-DLSALNTSTIQLVVVAT 219
           + A D D+G    +S    YE +      F IN  +G +SI   +  +   T  L V A+
Sbjct: 531 LTAVDADEGSNGEIS----YEILVGGKGDFVINKTTGLVSIAPGVELIVGQTYALTVQAS 586

Query: 220 DTGNP 224
           D   P
Sbjct: 587 DNAPP 591



 Score = 48.5 bits (114), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 70/233 (30%), Positives = 103/233 (44%), Gaps = 26/233 (11%)

Query: 13   LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKP 72
            LVV A       R++  TL +           F+ + Y+V   ENLP     L +   K 
Sbjct: 787  LVVVATDGAVHPRHSTLTLYIKVLDIDDNSPVFTNSTYTVVVEENLPAGTSFLQIEA-KD 845

Query: 73   RDL--RVKYWL-SNDYGERFSISR-QGDISLMQCLDYET----EDSYRFTVYATD---TL 121
             DL   V Y + S +    F++    G++SL++ LDYE     E S  F   A D   T+
Sbjct: 846  VDLGANVSYRIRSPEVKHLFALHPFTGELSLLRSLDYEAFPDQEASITFLAEAFDIYGTM 905

Query: 122  MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDK----GD 177
                ATV + V ++ND+ P F    Y+  +      D   G+ I  V A D D       
Sbjct: 906  PPGIATVTVIVKDMNDYPPVFSKRIYKGMV----APDAVKGTPITTVYAEDADPPGMPAS 961

Query: 178  RVTL---SLRGPY-EKMFSIN-DSGHI-SIVDLSALNTSTIQLVVVATDTGNP 224
            RV      ++ PY   +F +  DSG + + V+L+   T+  +LVVVA D G P
Sbjct: 962  RVRYRVDDVQFPYPASIFDVEEDSGRVVTRVNLNEEPTTIFKLVVVAFDDGEP 1014


>gi|218505743|ref|NP_001136218.1| protocadherin-15 isoform CD3-1 precursor [Mus musculus]
          Length = 1682

 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 61/195 (31%), Positives = 99/195 (50%), Gaps = 14/195 (7%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGER-FSISRQ-GDISLMQ 101
           +F +  YS+   E + +  +LL +         + Y + N   +R F++S   G +SL +
Sbjct: 620 RFPQLMYSLEVSEAMRIGAILLNLQATDREGDPITYAIENGDPQRVFNLSETTGILSLGK 679

Query: 102 CLDYETEDSYRFTVYATDTL--MTTSATVNISVVNVNDWDPRFRYPQYELFLP-HIPLAD 158
            LD E+ D Y   V A+D     T++ATVNI V +VND  P F     + +LP ++ + +
Sbjct: 680 ALDRESTDRYILIVTASDGRPDGTSTATVNIVVTDVNDNAPVF-----DPYLPRNLSVVE 734

Query: 159 LTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDSGHI-SIVDLSALNTSTIQLV 215
               + +G+V A D D G   +V  SL G +  +F I  +G I + V L+       +LV
Sbjct: 735 EEANAFVGQVRATDPDAGINGQVHYSL-GNFNNLFRITSNGSIYTAVKLNREARDHYELV 793

Query: 216 VVATDTGNPPRQASV 230
           VVATD    PR +++
Sbjct: 794 VVATDGAVHPRHSTL 808



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 65/245 (26%), Positives = 110/245 (44%), Gaps = 35/245 (14%)

Query: 6   DFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVL- 64
           DF Q   LV++A Q +     A A+L +     + +   F+   Y    LE+ PV   + 
Sbjct: 361 DFHQKFDLVIKAEQDNGHPLPAFASLHIEILDENNQSPYFTMPSYQGYILESAPVGATIS 420

Query: 65  --LTVTT-----------NKPRDLRVKYWLSNDYGERFSISRQG---DISLMQCLDYETE 108
             L +TT              +D  +  +L NDY   F+++  G    ++L+Q +D E +
Sbjct: 421 ESLNLTTPLRIVALDKDIEDTKDPELHLFL-NDYTSVFTVTPTGITRYLTLLQPVDREEQ 479

Query: 109 DSYRFTVYATDTLMTTS-ATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGK 167
            +Y F + A D +  +    VNI V++ ND  P F    Y++++      D++PG  + +
Sbjct: 480 QTYTFLITAFDGVQESEPVVVNIRVMDANDNTPTFPEISYDVYV----YTDMSPGDSVIQ 535

Query: 168 VEAADGDKGDRVTLSLRGPYEKM------FSIND-SGHISIV-DLSALNTSTIQLVVVAT 219
           + A D D+G    +S    YE +      F IN  +G +SI   +  +   T  L V A+
Sbjct: 536 LTAVDADEGSNGEIS----YEILVGGKGDFVINKTTGLVSIAPGVELIVGQTYALTVQAS 591

Query: 220 DTGNP 224
           D   P
Sbjct: 592 DNAPP 596



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 71/233 (30%), Positives = 104/233 (44%), Gaps = 26/233 (11%)

Query: 13   LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKP 72
            LVV A       R++  TL +           F+ + Y+V   ENLP     L +   K 
Sbjct: 792  LVVVATDGAVHPRHSTLTLYIKVLDIDDNSPVFTNSTYTVVVEENLPAGTSFLQIEA-KD 850

Query: 73   RDL--RVKYWL-SNDYGERFSISR-QGDISLMQCLDYET----EDSYRFTVYATD---TL 121
             DL   V Y + S +    F++    G++SL++ LDYE     E S  F V A D   T+
Sbjct: 851  VDLGANVSYRIRSPEVKHLFALHPFTGELSLLRSLDYEAFPDQEASITFLVEAFDIYGTM 910

Query: 122  MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDK----GD 177
                ATV + V ++ND+ P F    Y+  +      D   G+ I  V A D D       
Sbjct: 911  PPGIATVTVIVKDMNDYPPVFSKRIYKGMV----APDAVKGTPITTVYAEDADPPGMPAS 966

Query: 178  RVTL---SLRGPY-EKMFSIN-DSGHI-SIVDLSALNTSTIQLVVVATDTGNP 224
            RV      ++ PY   +F +  DSG + + V+L+   T+  +LVVVA D G P
Sbjct: 967  RVRYRVDDVQFPYPASIFDVEEDSGRVVTRVNLNEEPTTIFKLVVVAFDDGEP 1019


>gi|410948501|ref|XP_003980977.1| PREDICTED: protocadherin gamma-A5 [Felis catus]
          Length = 832

 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 60/197 (30%), Positives = 90/197 (45%), Gaps = 23/197 (11%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWLSND---YGERFSI-SRQGDI 97
           F+++EY V+  EN+PV   LLT+T   P +     + Y   N+     E F + S  G+I
Sbjct: 242 FTQSEYRVTVPENIPVGSRLLTLTATDPDEGVNGELTYSFRNEEDKISETFQLDSSLGEI 301

Query: 98  SLMQCLDYETEDSYRFTVYATD-TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
           S +Q LDYE    Y   V A D   +  SA V ++V +VND  P       E+ L  +  
Sbjct: 302 STLQSLDYEESRFYLMEVVAQDGGALLASAKVLVTVQDVNDNVP-------EVILTSLAS 354

Query: 157 A---DLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDS--GHISIVDLSALNTST 211
           +   D  PG+VI      DGD G+   +    P    F +  S   +  ++   AL+   
Sbjct: 355 SVSEDCPPGTVIALFSVHDGDSGENGEIVCSIPRNLPFKLEKSVDNYYHLLTTKALDREE 414

Query: 212 I---QLVVVATDTGNPP 225
           I    + +   D+GNPP
Sbjct: 415 ISDYNITITVIDSGNPP 431



 Score = 54.7 bits (130), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 74/274 (27%), Positives = 124/274 (45%), Gaps = 45/274 (16%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKP---RDLRVKYWLSNDYGERFSI-------SRQ 94
           F    YS   LEN P    +L+VT + P    + ++ Y L+    +  S+       S  
Sbjct: 452 FPHTSYSTYILENNPRGISILSVTAHDPDSGNNAKITYSLAEGMFQGMSLSTYVFINSNT 511

Query: 95  GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFL 151
           G +  +   DYE     +  V A+D+    ++++ ++++ VV+ ND  P   YP     +
Sbjct: 512 GILYALGSFDYEQVKDLQLWVMASDSGDPPLSSNMSLSLFVVDQNDNAPEILYPS----I 567

Query: 152 P-----HIPLA--DLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-DSGHI- 199
           P      + LA     PG ++ KV A D D G    LS   L+     +F++   +G + 
Sbjct: 568 PTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYHLLKVSEPGLFTVGLHTGEVR 627

Query: 200 ---SIVDLSALNTSTIQLVVVATDTGNPPRQASVPAIM----HFPEAIVQQASSKLNS-- 250
              +++D  AL  S   LVVV  D G PP  A+V   +      P+ +    S K +S  
Sbjct: 628 TARALLDRDALKQS---LVVVVQDHGQPPLSATVTLTVAVADSIPDVLADLDSLKPSSYA 684

Query: 251 -GTSSTVLIILGVV---LIVLGFVIILLILYIHK 280
            G+S T+ +++ V     + L FVI+LL L + +
Sbjct: 685 DGSSLTLYLVVAVAVVSCVFLTFVIVLLALRLRR 718


>gi|85725293|gb|ABC79264.1| protocadherin-15-CD1 isoform 8 [Mus musculus]
          Length = 1896

 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 61/195 (31%), Positives = 99/195 (50%), Gaps = 14/195 (7%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGER-FSISRQ-GDISLMQ 101
           +F +  YS+   E + +  +LL +         + Y + N   +R F++S   G +SL +
Sbjct: 578 RFPQLMYSLEVSEAMRIGAILLNLQATDREGDPITYAIENGDPQRVFNLSETTGILSLGK 637

Query: 102 CLDYETEDSYRFTVYATDTL--MTTSATVNISVVNVNDWDPRFRYPQYELFLP-HIPLAD 158
            LD E+ D Y   V A+D     T++ATVNI V +VND  P F     + +LP ++ + +
Sbjct: 638 ALDRESTDRYILIVTASDGRPDGTSTATVNIVVTDVNDNAPVF-----DPYLPRNLSVVE 692

Query: 159 LTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDSGHI-SIVDLSALNTSTIQLV 215
               + +G+V A D D G   +V  SL G +  +F I  +G I + V L+       +LV
Sbjct: 693 EEANAFVGQVRATDPDAGINGQVHYSL-GNFNNLFRITSNGSIYTAVKLNREARDHYELV 751

Query: 216 VVATDTGNPPRQASV 230
           VVATD    PR +++
Sbjct: 752 VVATDGAVHPRHSTL 766



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 65/245 (26%), Positives = 110/245 (44%), Gaps = 35/245 (14%)

Query: 6   DFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVL- 64
           DF Q   LV++A Q +     A A+L +     + +   F+   Y    LE+ PV   + 
Sbjct: 319 DFHQKFDLVIKAEQDNGHPLPAFASLHIEILDENNQSPYFTMPSYQGYILESAPVGATIS 378

Query: 65  --LTVTT-----------NKPRDLRVKYWLSNDYGERFSISRQG---DISLMQCLDYETE 108
             L +TT              +D  +  +L NDY   F+++  G    ++L+Q +D E +
Sbjct: 379 ESLNLTTPLRIVALDKDIEDTKDPELHLFL-NDYTSVFTVTPTGITRYLTLLQPVDREEQ 437

Query: 109 DSYRFTVYATDTLMTTS-ATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGK 167
            +Y F + A D +  +    VNI V++ ND  P F    Y++++      D++PG  + +
Sbjct: 438 QTYTFLITAFDGVQESEPVVVNIRVMDANDNTPTFPEISYDVYV----YTDMSPGDSVIQ 493

Query: 168 VEAADGDKGDRVTLSLRGPYEKM------FSIND-SGHISIV-DLSALNTSTIQLVVVAT 219
           + A D D+G    +S    YE +      F IN  +G +SI   +  +   T  L V A+
Sbjct: 494 LTAVDADEGSNGEIS----YEILVGGKGDFVINKTTGLVSIAPGVELIVGQTYALTVQAS 549

Query: 220 DTGNP 224
           D   P
Sbjct: 550 DNAPP 554



 Score = 48.5 bits (114), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 70/233 (30%), Positives = 103/233 (44%), Gaps = 26/233 (11%)

Query: 13  LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKP 72
           LVV A       R++  TL +           F+ + Y+V   ENLP     L +   K 
Sbjct: 750 LVVVATDGAVHPRHSTLTLYIKVLDIDDNSPVFTNSTYTVVVEENLPAGTSFLQIEA-KD 808

Query: 73  RDL--RVKYWL-SNDYGERFSISR-QGDISLMQCLDYET----EDSYRFTVYATD---TL 121
            DL   V Y + S +    F++    G++SL++ LDYE     E S  F   A D   T+
Sbjct: 809 VDLGANVSYRIRSPEVKHLFALHPFTGELSLLRSLDYEAFPDQEASITFLAEAFDIYGTM 868

Query: 122 MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDK----GD 177
               ATV + V ++ND+ P F    Y+  +      D   G+ I  V A D D       
Sbjct: 869 PPGIATVTVIVKDMNDYPPVFSKRIYKGMV----APDAVKGTPITTVYAEDADPPGMPAS 924

Query: 178 RVTL---SLRGPY-EKMFSIN-DSGHI-SIVDLSALNTSTIQLVVVATDTGNP 224
           RV      ++ PY   +F +  DSG + + V+L+   T+  +LVVVA D G P
Sbjct: 925 RVRYRVDDVQFPYPASIFDVEEDSGRVVTRVNLNEEPTTIFKLVVVAFDDGEP 977


>gi|85725301|gb|ABC79268.1| protocadherin-15-CD2 isoform 1 [Mus musculus]
          Length = 1790

 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 61/195 (31%), Positives = 99/195 (50%), Gaps = 14/195 (7%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGER-FSISRQ-GDISLMQ 101
           +F +  YS+   E + +  +LL +         + Y + N   +R F++S   G +SL +
Sbjct: 627 RFPQLMYSLEVSEAMRIGAILLNLQATDREGDPITYAIENGDPQRVFNLSETTGILSLGK 686

Query: 102 CLDYETEDSYRFTVYATDTL--MTTSATVNISVVNVNDWDPRFRYPQYELFLP-HIPLAD 158
            LD E+ D Y   V A+D     T++ATVNI V +VND  P F     + +LP ++ + +
Sbjct: 687 ALDRESTDRYILIVTASDGRPDGTSTATVNIVVTDVNDNAPVF-----DPYLPRNLSVVE 741

Query: 159 LTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDSGHI-SIVDLSALNTSTIQLV 215
               + +G+V A D D G   +V  SL G +  +F I  +G I + V L+       +LV
Sbjct: 742 EEANAFVGQVRATDPDAGINGQVHYSL-GNFNNLFRITSNGSIYTAVKLNREARDHYELV 800

Query: 216 VVATDTGNPPRQASV 230
           VVATD    PR +++
Sbjct: 801 VVATDGAVHPRHSTL 815



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 66/252 (26%), Positives = 112/252 (44%), Gaps = 42/252 (16%)

Query: 6   DFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVL- 64
           DF Q   LV++A Q +     A A+L +     + +   F+   Y    LE+ PV   + 
Sbjct: 361 DFHQKFDLVIKAEQDNGHPLPAFASLHIEILDENNQSPYFTMPSYQGYILESAPVGATIS 420

Query: 65  --LTVTT------------NKP------RDLRVKYWLSNDYGERFSISRQG---DISLMQ 101
             L +TT            + P      +D  +  +L NDY   F+++  G    ++L+Q
Sbjct: 421 ESLNLTTPLRIVALDKDIEDVPPGGVPTKDPELHLFL-NDYTSVFTVTPTGITRYLTLLQ 479

Query: 102 CLDYETEDSYRFTVYATDTLMTTS-ATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLT 160
            +D E + +Y F + A D +  +    VNI V++ ND  P F    Y++++      D++
Sbjct: 480 PVDREEQQTYTFLITAFDGVQESEPVVVNIRVMDANDNTPTFPEISYDVYV----YTDMS 535

Query: 161 PGSVIGKVEAADGDKGDRVTLSLRGPYEKM------FSIND-SGHISIV-DLSALNTSTI 212
           PG  + ++ A D D+G    +S    YE +      F IN  +G +SI   +  +   T 
Sbjct: 536 PGDSVIQLTAVDADEGSNGEIS----YEILVGGKGDFVINKTTGLVSIAPGVELIVGQTY 591

Query: 213 QLVVVATDTGNP 224
            L V A+D   P
Sbjct: 592 ALTVQASDNAPP 603



 Score = 47.4 bits (111), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 70/233 (30%), Positives = 103/233 (44%), Gaps = 26/233 (11%)

Query: 13   LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKP 72
            LVV A       R++  TL +           F+ + Y+V   ENLP     L +   K 
Sbjct: 799  LVVVATDGAVHPRHSTLTLYIKVLDIDDNSPVFTNSTYTVVVEENLPAGTSFLQIEA-KD 857

Query: 73   RDL--RVKYWL-SNDYGERFSISR-QGDISLMQCLDYET----EDSYRFTVYATD---TL 121
             DL   V Y + S +    F++    G++SL++ LDYE     E S  F   A D   T+
Sbjct: 858  VDLGANVSYRIRSPEVKHLFALHPFTGELSLLRSLDYEAFPDQEASITFLAEAFDIYGTM 917

Query: 122  MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDK----GD 177
                ATV + V ++ND+ P F    Y+  +      D   G+ I  V A D D       
Sbjct: 918  PPGIATVTVIVKDMNDYPPVFSKRIYKGMV----APDAVKGTPITTVYAEDADPPGMPAS 973

Query: 178  RVTL---SLRGPY-EKMFSIN-DSGHI-SIVDLSALNTSTIQLVVVATDTGNP 224
            RV      ++ PY   +F +  DSG + + V+L+   T+  +LVVVA D G P
Sbjct: 974  RVRYRVDDVQFPYPASIFDVEEDSGRVVTRVNLNEEPTTIFKLVVVAFDDGEP 1026


>gi|193787782|dbj|BAG52985.1| unnamed protein product [Homo sapiens]
          Length = 1289

 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 78/301 (25%), Positives = 132/301 (43%), Gaps = 33/301 (10%)

Query: 11  ITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVN--------- 61
            TL V+A   + +  ++ A + VS    +    QF  + +S    ENLP++         
Sbjct: 654 FTLTVQASDAEKK-HFSFAVVFVSVLDDNDHAPQFMFSSFSCIVPENLPISSTICSINAL 712

Query: 62  ------YVLLTVTTNKPRDLRVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTV 115
                 Y  LT +   P    + + +S D+         GDI   Q LDYE  + Y  TV
Sbjct: 713 DFDAGPYGELTYSIVSP--CFLTHGMSYDHDLFLIDPLTGDIHAKQILDYENGNKYCLTV 770

Query: 116 YATDTL-MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGD 174
            A D    T S  V + +  +++++P F   QY   LP           +IG+VEA+D D
Sbjct: 771 QAKDKGDATASLVVWVDIEGIDEFEPIFTQDQYFFTLPE----KNKDRQLIGRVEASDAD 826

Query: 175 KG-DRVTLSLRGPYEKMFSINDS-GHISIVDL-----SALNTS-TIQLVVVATDTGNPPR 226
            G D V L   G     FS+N + G+I ++       S LN   T+++ ++A    +  +
Sbjct: 827 AGIDGVILYSLGTSSPFFSVNKTNGNIYLIRALPLIKSQLNKEDTLEMKIIAHSPKSDSK 886

Query: 227 QASVPAIMHFPEAIVQQASSKLNSGTSSTVLIILGVVLIVLGFVIILLILYIHKNKHTKN 286
            AS    ++   +      +   S  S ++++   V LI++  +I++++   HK K T N
Sbjct: 887 FASCTVFVNVSFSSEGTPLAVFASSFSISLVVSFLVFLILICILIVMILR--HKQKDTIN 944

Query: 287 N 287
           N
Sbjct: 945 N 945



 Score = 45.8 bits (107), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 43/148 (29%), Positives = 77/148 (52%), Gaps = 11/148 (7%)

Query: 86  GERFSISRQ-GDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRY 144
           G +F+I +  G + L++ LD+E    Y   +  +D++  T   + + V++VND  P F  
Sbjct: 308 GTKFAIDQNTGVVVLVKTLDFEEMTEYELLIQISDSVHYTEGALVVRVLDVNDNPPVFSQ 367

Query: 145 PQYELFLPH-IPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSIN-DSGHI-SI 201
             Y++ +P  IP+     G  +  + A D +  + ++  +     K FSI+  +G I +I
Sbjct: 368 DFYQVTVPESIPV-----GYSVLTLSATDLESNENISYRILSS-SKEFSIDPKNGTIFTI 421

Query: 202 VDLSALNT-STIQLVVVATDTGNPPRQA 228
             +  L+T ST Q +V A+D GNP  +A
Sbjct: 422 SPVLLLDTISTTQFLVEASDGGNPDLRA 449



 Score = 41.6 bits (96), Expect = 0.70,   Method: Compositional matrix adjust.
 Identities = 38/148 (25%), Positives = 66/148 (44%), Gaps = 19/148 (12%)

Query: 56  ENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTV 115
           EN  V Y +++  +     +  K++ S      +   + G + L+  LD E   S+   +
Sbjct: 499 ENTYVEYSIISGNSQNNFHVETKFFHS-----EYPYKQVGYLVLLHSLDREASASHELVI 553

Query: 116 YATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTP-GSVIGKVEAA 171
            A+D+    ++++A ++I V++VND  P F    Y     H  + + TP GS I  V A 
Sbjct: 554 LASDSGCPPLSSTAVISIQVLDVNDNPPNFSSLSY-----HTHVKESTPLGSHITVVSAN 608

Query: 172 DGDKGDRVTLSLRGPYEKMFSINDSGHI 199
           D D G    +        + S N+ GH 
Sbjct: 609 DRDTGSHAEIIYN-----IISGNEKGHF 631



 Score = 40.0 bits (92), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 41/152 (26%), Positives = 66/152 (43%), Gaps = 15/152 (9%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRD----LRVKYWL--SNDYGERFSISRQGDIS 98
           FS   Y     E+ P+   +  V+ N  RD      + Y +   N+ G  +     G + 
Sbjct: 583 FSSLSYHTHVKESTPLGSHITVVSAND-RDTGSHAEIIYNIISGNEKGHFYLEENTGVLY 641

Query: 99  LMQCLDYETEDSYRFTVYATDTLMT--TSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
           L++ LDYE    +  TV A+D      + A V +SV++ ND  P+F +  +   +P    
Sbjct: 642 LIKPLDYEKMTKFTLTVQASDAEKKHFSFAVVFVSVLDDNDHAPQFMFSSFSCIVPE--- 698

Query: 157 ADLTPGSVIGKVEAADGDKG--DRVTLSLRGP 186
            +L   S I  + A D D G    +T S+  P
Sbjct: 699 -NLPISSTICSINALDFDAGPYGELTYSIVSP 729


>gi|85725287|gb|ABC79261.1| protocadherin-15-CD1 isoform 4 [Mus musculus]
          Length = 1936

 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 61/195 (31%), Positives = 99/195 (50%), Gaps = 14/195 (7%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGER-FSISRQ-GDISLMQ 101
           +F +  YS+   E + +  +LL +         + Y + N   +R F++S   G +SL +
Sbjct: 615 RFPQLMYSLEVSEAMRIGAILLNLQATDREGDPITYAIENGDPQRVFNLSETTGILSLGK 674

Query: 102 CLDYETEDSYRFTVYATDTL--MTTSATVNISVVNVNDWDPRFRYPQYELFLP-HIPLAD 158
            LD E+ D Y   V A+D     T++ATVNI V +VND  P F     + +LP ++ + +
Sbjct: 675 ALDRESTDRYILIVTASDGRPDGTSTATVNIVVTDVNDNAPVF-----DPYLPRNLSVVE 729

Query: 159 LTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDSGHI-SIVDLSALNTSTIQLV 215
               + +G+V A D D G   +V  SL G +  +F I  +G I + V L+       +LV
Sbjct: 730 EEANAFVGQVRATDPDAGINGQVHYSL-GNFNNLFRITSNGSIYTAVKLNREARDHYELV 788

Query: 216 VVATDTGNPPRQASV 230
           VVATD    PR +++
Sbjct: 789 VVATDGAVHPRHSTL 803



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 65/245 (26%), Positives = 110/245 (44%), Gaps = 35/245 (14%)

Query: 6   DFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVL- 64
           DF Q   LV++A Q +     A A+L +     + +   F+   Y    LE+ PV   + 
Sbjct: 356 DFHQKFDLVIKAEQDNGHPLPAFASLHIEILDENNQSPYFTMPSYQGYILESAPVGATIS 415

Query: 65  --LTVTT-----------NKPRDLRVKYWLSNDYGERFSISRQG---DISLMQCLDYETE 108
             L +TT              +D  +  +L NDY   F+++  G    ++L+Q +D E +
Sbjct: 416 ESLNLTTPLRIVALDKDIEDTKDPELHLFL-NDYTSVFTVTPTGITRYLTLLQPVDREEQ 474

Query: 109 DSYRFTVYATDTLMTTS-ATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGK 167
            +Y F + A D +  +    VNI V++ ND  P F    Y++++      D++PG  + +
Sbjct: 475 QTYTFLITAFDGVQESEPVVVNIRVMDANDNTPTFPEISYDVYV----YTDMSPGDSVIQ 530

Query: 168 VEAADGDKGDRVTLSLRGPYEKM------FSIND-SGHISIV-DLSALNTSTIQLVVVAT 219
           + A D D+G    +S    YE +      F IN  +G +SI   +  +   T  L V A+
Sbjct: 531 LTAVDADEGSNGEIS----YEILVGGKGDFVINKTTGLVSIAPGVELIVGQTYALTVQAS 586

Query: 220 DTGNP 224
           D   P
Sbjct: 587 DNAPP 591



 Score = 48.5 bits (114), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 70/233 (30%), Positives = 103/233 (44%), Gaps = 26/233 (11%)

Query: 13   LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKP 72
            LVV A       R++  TL +           F+ + Y+V   ENLP     L +   K 
Sbjct: 787  LVVVATDGAVHPRHSTLTLYIKVLDIDDNSPVFTNSTYTVVVEENLPAGTSFLQIEA-KD 845

Query: 73   RDL--RVKYWL-SNDYGERFSISR-QGDISLMQCLDYET----EDSYRFTVYATD---TL 121
             DL   V Y + S +    F++    G++SL++ LDYE     E S  F   A D   T+
Sbjct: 846  VDLGANVSYRIRSPEVKHLFALHPFTGELSLLRSLDYEAFPDQEASITFLAEAFDIYGTM 905

Query: 122  MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDK----GD 177
                ATV + V ++ND+ P F    Y+  +      D   G+ I  V A D D       
Sbjct: 906  PPGIATVTVIVKDMNDYPPVFSKRIYKGMV----APDAVKGTPITTVYAEDADPPGMPAS 961

Query: 178  RVTL---SLRGPY-EKMFSIN-DSGHI-SIVDLSALNTSTIQLVVVATDTGNP 224
            RV      ++ PY   +F +  DSG + + V+L+   T+  +LVVVA D G P
Sbjct: 962  RVRYRVDDVQFPYPASIFDVEEDSGRVVTRVNLNEEPTTIFKLVVVAFDDGEP 1014


>gi|111074522|ref|NP_075604.2| protocadherin-15 isoform CD1-1 precursor [Mus musculus]
 gi|225000578|gb|AAI72646.1| Protocadherin 15 [synthetic construct]
          Length = 1943

 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 61/195 (31%), Positives = 99/195 (50%), Gaps = 14/195 (7%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGER-FSISRQ-GDISLMQ 101
           +F +  YS+   E + +  +LL +         + Y + N   +R F++S   G +SL +
Sbjct: 620 RFPQLMYSLEVSEAMRIGAILLNLQATDREGDPITYAIENGDPQRVFNLSETTGILSLGK 679

Query: 102 CLDYETEDSYRFTVYATDTL--MTTSATVNISVVNVNDWDPRFRYPQYELFLP-HIPLAD 158
            LD E+ D Y   V A+D     T++ATVNI V +VND  P F     + +LP ++ + +
Sbjct: 680 ALDRESTDRYILIVTASDGRPDGTSTATVNIVVTDVNDNAPVF-----DPYLPRNLSVVE 734

Query: 159 LTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDSGHI-SIVDLSALNTSTIQLV 215
               + +G+V A D D G   +V  SL G +  +F I  +G I + V L+       +LV
Sbjct: 735 EEANAFVGQVRATDPDAGINGQVHYSL-GNFNNLFRITSNGSIYTAVKLNREARDHYELV 793

Query: 216 VVATDTGNPPRQASV 230
           VVATD    PR +++
Sbjct: 794 VVATDGAVHPRHSTL 808



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 65/245 (26%), Positives = 110/245 (44%), Gaps = 35/245 (14%)

Query: 6   DFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVL- 64
           DF Q   LV++A Q +     A A+L +     + +   F+   Y    LE+ PV   + 
Sbjct: 361 DFHQKFDLVIKAEQDNGHPLPAFASLHIEILDENNQSPYFTMPSYQGYILESAPVGATIS 420

Query: 65  --LTVTT-----------NKPRDLRVKYWLSNDYGERFSISRQG---DISLMQCLDYETE 108
             L +TT              +D  +  +L NDY   F+++  G    ++L+Q +D E +
Sbjct: 421 ESLNLTTPLRIVALDKDIEDTKDPELHLFL-NDYTSVFTVTPTGITRYLTLLQPVDREEQ 479

Query: 109 DSYRFTVYATDTLMTTS-ATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGK 167
            +Y F + A D +  +    VNI V++ ND  P F    Y++++      D++PG  + +
Sbjct: 480 QTYTFLITAFDGVQESEPVVVNIRVMDANDNTPTFPEISYDVYV----YTDMSPGDSVIQ 535

Query: 168 VEAADGDKGDRVTLSLRGPYEKM------FSIND-SGHISIV-DLSALNTSTIQLVVVAT 219
           + A D D+G    +S    YE +      F IN  +G +SI   +  +   T  L V A+
Sbjct: 536 LTAVDADEGSNGEIS----YEILVGGKGDFVINKTTGLVSIAPGVELIVGQTYALTVQAS 591

Query: 220 DTGNP 224
           D   P
Sbjct: 592 DNAPP 596



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 71/233 (30%), Positives = 104/233 (44%), Gaps = 26/233 (11%)

Query: 13   LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKP 72
            LVV A       R++  TL +           F+ + Y+V   ENLP     L +   K 
Sbjct: 792  LVVVATDGAVHPRHSTLTLYIKVLDIDDNSPVFTNSTYTVVVEENLPAGTSFLQIEA-KD 850

Query: 73   RDL--RVKYWL-SNDYGERFSISR-QGDISLMQCLDYET----EDSYRFTVYATD---TL 121
             DL   V Y + S +    F++    G++SL++ LDYE     E S  F V A D   T+
Sbjct: 851  VDLGANVSYRIRSPEVKHLFALHPFTGELSLLRSLDYEAFPDQEASITFLVEAFDIYGTM 910

Query: 122  MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDK----GD 177
                ATV + V ++ND+ P F    Y+  +      D   G+ I  V A D D       
Sbjct: 911  PPGIATVTVIVKDMNDYPPVFSKRIYKGMV----APDAVKGTPITTVYAEDADPPGMPAS 966

Query: 178  RVTL---SLRGPY-EKMFSIN-DSGHI-SIVDLSALNTSTIQLVVVATDTGNP 224
            RV      ++ PY   +F +  DSG + + V+L+   T+  +LVVVA D G P
Sbjct: 967  RVRYRVDDVQFPYPASIFDVEEDSGRVVTRVNLNEEPTTIFKLVVVAFDDGEP 1019


>gi|377833047|ref|XP_003689295.1| PREDICTED: protocadherin-15-like [Mus musculus]
          Length = 1696

 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 61/195 (31%), Positives = 99/195 (50%), Gaps = 14/195 (7%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGER-FSISRQ-GDISLMQ 101
           +F +  YS+   E + +  +LL +         + Y + N   +R F++S   G +SL +
Sbjct: 533 RFPQLMYSLEVSEAMRIGAILLNLQATDREGDPITYAIENGDPQRVFNLSETTGILSLGK 592

Query: 102 CLDYETEDSYRFTVYATDTL--MTTSATVNISVVNVNDWDPRFRYPQYELFLP-HIPLAD 158
            LD E+ D Y   V A+D     T++ATVNI V +VND  P F     + +LP ++ + +
Sbjct: 593 ALDRESTDRYILIVTASDGRPDGTSTATVNIVVTDVNDNAPVF-----DPYLPRNLSVVE 647

Query: 159 LTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDSGHI-SIVDLSALNTSTIQLV 215
               + +G+V A D D G   +V  SL G +  +F I  +G I + V L+       +LV
Sbjct: 648 EEANAFVGQVRATDPDAGINGQVHYSL-GNFNNLFRITSNGSIYTAVKLNREARDHYELV 706

Query: 216 VVATDTGNPPRQASV 230
           VVATD    PR +++
Sbjct: 707 VVATDGAVHPRHSTL 721



 Score = 52.4 bits (124), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 66/252 (26%), Positives = 112/252 (44%), Gaps = 42/252 (16%)

Query: 6   DFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVL- 64
           DF Q   LV++A Q +     A A+L +     + +   F+   Y    LE+ PV   + 
Sbjct: 267 DFHQKFDLVIKAEQDNGHPLPAFASLHIEILDENNQSPYFTMPSYQGYILESAPVGATIS 326

Query: 65  --LTVTT------------NKP------RDLRVKYWLSNDYGERFSISRQG---DISLMQ 101
             L +TT            + P      +D  +  +L NDY   F+++  G    ++L+Q
Sbjct: 327 ESLNLTTPLRIVALDKDIEDVPPGGVPTKDPELHLFL-NDYTSVFTVTPTGITRYLTLLQ 385

Query: 102 CLDYETEDSYRFTVYATDTLMTTS-ATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLT 160
            +D E + +Y F + A D +  +    VNI V++ ND  P F    Y++++      D++
Sbjct: 386 PVDREEQQTYTFLITAFDGVQESEPVVVNIRVMDANDNTPTFPEISYDVYV----YTDMS 441

Query: 161 PGSVIGKVEAADGDKGDRVTLSLRGPYEKM------FSIND-SGHISIV-DLSALNTSTI 212
           PG  + ++ A D D+G    +S    YE +      F IN  +G +SI   +  +   T 
Sbjct: 442 PGDSVIQLTAVDADEGSNGEIS----YEILVGGKGDFVINKTTGLVSIAPGVELIVGQTY 497

Query: 213 QLVVVATDTGNP 224
            L V A+D   P
Sbjct: 498 ALTVQASDNAPP 509



 Score = 48.9 bits (115), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 64/201 (31%), Positives = 94/201 (46%), Gaps = 26/201 (12%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRDL--RVKYWL-SNDYGERFSISR-QGDISLM 100
           F+ + Y+V   ENLP     L +   K  DL   V Y + S +    F++    G++SL+
Sbjct: 737 FTNSTYTVVVEENLPAGTSFLQIEA-KDVDLGANVSYRIRSPEVKHLFALHPFTGELSLL 795

Query: 101 QCLDYET----EDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
           + LDYE     E S  F V A D   T+    ATV + V ++ND+ P F    Y+  +  
Sbjct: 796 RSLDYEAFPDQEASITFLVEAFDIYGTMPPGIATVTVIVKDMNDYPPVFSKRIYKGMV-- 853

Query: 154 IPLADLTPGSVIGKVEAADGDK----GDRVTL---SLRGPY-EKMFSIN-DSGHI-SIVD 203
               D   G+ I  V A D D       RV      ++ PY   +F +  DSG + + V+
Sbjct: 854 --APDAVKGTPITTVYAEDADPPGMPASRVRYRVDDVQFPYPASIFDVEEDSGRVVTRVN 911

Query: 204 LSALNTSTIQLVVVATDTGNP 224
           L+   T+  +LVVVA D G P
Sbjct: 912 LNEEPTTIFKLVVVAFDDGEP 932


>gi|341941234|sp|Q99PJ1.2|PCD15_MOUSE RecName: Full=Protocadherin-15; Flags: Precursor
          Length = 1943

 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 61/195 (31%), Positives = 99/195 (50%), Gaps = 14/195 (7%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGER-FSISRQ-GDISLMQ 101
           +F +  YS+   E + +  +LL +         + Y + N   +R F++S   G +SL +
Sbjct: 620 RFPQLMYSLEVSEAMRIGAILLNLQATDREGDPITYAIENGDPQRVFNLSETTGILSLGK 679

Query: 102 CLDYETEDSYRFTVYATDTL--MTTSATVNISVVNVNDWDPRFRYPQYELFLP-HIPLAD 158
            LD E+ D Y   V A+D     T++ATVNI V +VND  P F     + +LP ++ + +
Sbjct: 680 ALDRESTDRYILIVTASDGRPDGTSTATVNIVVTDVNDNAPVF-----DPYLPRNLSVVE 734

Query: 159 LTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDSGHI-SIVDLSALNTSTIQLV 215
               + +G+V A D D G   +V  SL G +  +F I  +G I + V L+       +LV
Sbjct: 735 EEANAFVGQVRATDPDAGINGQVHYSL-GNFNNLFRITSNGSIYTAVKLNREARDHYELV 793

Query: 216 VVATDTGNPPRQASV 230
           VVATD    PR +++
Sbjct: 794 VVATDGAVHPRHSTL 808



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 65/245 (26%), Positives = 110/245 (44%), Gaps = 35/245 (14%)

Query: 6   DFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVL- 64
           DF Q   LV++A Q +     A A+L +     + +   F+   Y    LE+ PV   + 
Sbjct: 361 DFHQKFDLVIKAEQDNGHPLPAFASLHIEILDENNQSPYFTMPSYQGYILESAPVGATIS 420

Query: 65  --LTVTT-----------NKPRDLRVKYWLSNDYGERFSISRQG---DISLMQCLDYETE 108
             L +TT              +D  +  +L NDY   F+++  G    ++L+Q +D E +
Sbjct: 421 ESLNLTTPLRIVALDKDIEDTKDPELHLFL-NDYTSVFTVTPTGITRYLTLLQPVDREEQ 479

Query: 109 DSYRFTVYATDTLMTTS-ATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGK 167
            +Y F + A D +  +    VNI V++ ND  P F    Y++++      D++PG  + +
Sbjct: 480 QTYTFLITAFDGVQESEPVVVNIRVMDANDNTPTFPEISYDVYV----YTDMSPGDSVIQ 535

Query: 168 VEAADGDKGDRVTLSLRGPYEKM------FSIND-SGHISIV-DLSALNTSTIQLVVVAT 219
           + A D D+G    +S    YE +      F IN  +G +SI   +  +   T  L V A+
Sbjct: 536 LTAVDADEGSNGEIS----YEILVGGKGDFVINKTTGLVSIAPGVELIVGQTYALTVQAS 591

Query: 220 DTGNP 224
           D   P
Sbjct: 592 DNAPP 596



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 71/233 (30%), Positives = 104/233 (44%), Gaps = 26/233 (11%)

Query: 13   LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKP 72
            LVV A       R++  TL +           F+ + Y+V   ENLP     L +   K 
Sbjct: 792  LVVVATDGAVHPRHSTLTLYIKVLDIDDNSPVFTNSTYTVVVEENLPAGTSFLQIEA-KD 850

Query: 73   RDL--RVKYWL-SNDYGERFSISR-QGDISLMQCLDYET----EDSYRFTVYATD---TL 121
             DL   V Y + S +    F++    G++SL++ LDYE     E S  F V A D   T+
Sbjct: 851  VDLGANVSYRIRSPEVKHLFALHPFTGELSLLRSLDYEAFPDQEASITFLVEAFDIYGTM 910

Query: 122  MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDK----GD 177
                ATV + V ++ND+ P F    Y+  +      D   G+ I  V A D D       
Sbjct: 911  PPGIATVTVIVKDMNDYPPVFSKRIYKGMV----APDAVKGTPITTVYAEDADPPGMPAS 966

Query: 178  RVTL---SLRGPY-EKMFSIN-DSGHI-SIVDLSALNTSTIQLVVVATDTGNP 224
            RV      ++ PY   +F +  DSG + + V+L+   T+  +LVVVA D G P
Sbjct: 967  RVRYRVDDVQFPYPASIFDVEEDSGRVVTRVNLNEEPTTIFKLVVVAFDDGEP 1019


>gi|338725210|ref|XP_001494282.3| PREDICTED: LOW QUALITY PROTEIN: cadherin EGF LAG seven-pass G-type
           receptor 2 [Equus caballus]
          Length = 3016

 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 68/219 (31%), Positives = 101/219 (46%), Gaps = 22/219 (10%)

Query: 25  RYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWL 81
           R ALATL +    T+  +  F + EY  S  ENL V Y +LTV     + P +  + Y L
Sbjct: 363 RSALATLTILVTDTNDHDPVFEQQEYKESLRENLEVGYEVLTVRATDGDAPPNANILYRL 422

Query: 82  SNDYG----ERFSIS-RQGDISLMQCLDYETEDSYRFTVYATDT-----LMTTSATVNIS 131
               G    E F I  R G I     +D E  +SY+ TV A+D        + +A V +S
Sbjct: 423 LEGPGGSPSEVFEIDPRSGVIRTRGPVDREEVESYQLTVEASDQGRDPGPRSATAAVFLS 482

Query: 132 VVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYE 188
           V + ND  P+F   +Y + +      D+TPG+ + +V A+D DKG    +    + G   
Sbjct: 483 VEDDNDNAPQFSEKRYVVQV----REDVTPGAPVLRVTASDRDKGSNALVHYSIMSGNAR 538

Query: 189 KMFSIN-DSGHISIVD-LSALNTSTIQLVVVATDTGNPP 225
             F ++  +G + +V  L    T    L + A D G PP
Sbjct: 539 GQFYLDAQTGALDVVSPLDYETTKEYTLRIRAQDGGRPP 577



 Score = 51.6 bits (122), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 49/171 (28%), Positives = 79/171 (46%), Gaps = 15/171 (8%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGERFSIS---RQGDIS 98
           F    +  + LE++P+ Y++L V     +   + R++Y L+   G  F  +     G IS
Sbjct: 599 FVSTPFQATVLESVPLGYLVLHVQAIDADAGDNARLEYRLAG-VGHDFPFTINNGTGWIS 657

Query: 99  LMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIP 155
           +   LD E  D Y F V A D     +T SA+V +++++VND +P F  P+Y + L    
Sbjct: 658 VAAELDREEVDFYSFGVEARDHGTPALTASASVTVTILDVNDNNPTFTQPEYTVRLNE-- 715

Query: 156 LADLTPGSVIGKVEAADGDKGDRVTLSL-RGPYEKMFSINDSGHISIVDLS 205
             D   G+ +  V A D D    +T  +  G     FSI       +V L+
Sbjct: 716 --DAAVGTSVVTVSAVDRDAHSVITYQITSGNTRNRFSITSQSGGGLVSLA 764



 Score = 45.1 bits (105), Expect = 0.064,   Method: Compositional matrix adjust.
 Identities = 51/189 (26%), Positives = 86/189 (45%), Gaps = 14/189 (7%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRDLR--VKYWL-SNDYGERFSISRQ---GDIS 98
           F++ EY+V   E+  V   ++TV+    RD    + Y + S +   RFSI+ Q   G +S
Sbjct: 704 FTQPEYTVRLNEDAAVGTSVVTVSAVD-RDAHSVITYQITSGNTRNRFSITSQSGGGLVS 762

Query: 99  LMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLAD 158
           L   LDY+ E  Y   V A+D     +A V ++V + N   P F+   Y + +      D
Sbjct: 763 LALPLDYKLERQYVLAVTASDGTRQDTAQVVVNVTDANTHRPVFQSSHYTVNVNE----D 818

Query: 159 LTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSINDSGHISI-VDLSALNTSTIQLV 215
              G+ +  + A D D G+  R+T  +     +     D+G ++   +L   +  +  L 
Sbjct: 819 RPAGTTVVLISATDEDTGENARITYFMEDSIPQFRIDADTGAVTTQAELDYEDQVSYTLA 878

Query: 216 VVATDTGNP 224
           + A D G P
Sbjct: 879 ITARDNGIP 887



 Score = 43.9 bits (102), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 40/149 (26%), Positives = 69/149 (46%), Gaps = 10/149 (6%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWL-SNDYGERFSIS-RQGDISL 99
            F ++E+ V   EN P+   +  VT   P +    ++ Y +   +  E F +    G+++ 
Sbjct: 1015 FEQDEFDVFVEENSPIGLAVARVTATDPDEGTNAQIMYQIVEGNIPEVFQLDIFSGELTA 1074

Query: 100  MQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPH--IPLA 157
            +  LDYE    Y   + AT   + + ATV++ +++ ND  P      +E+   +     +
Sbjct: 1075 LVDLDYEDRPEYILVIQATSAPLVSRATVHVRLLDRNDNPPVLG--NFEILFNNYVTNRS 1132

Query: 158  DLTPGSVIGKVEAADGDKGDRVTLSL-RG 185
               PG  IG+V A D D  D +T S  RG
Sbjct: 1133 SSFPGGAIGRVPAHDPDISDSLTYSFERG 1161


>gi|284925134|ref|NP_001165404.1| cadherin-23 isoform 6 [Homo sapiens]
 gi|50254112|gb|AAT72165.1| cadherin 23 isoform B1 [Homo sapiens]
          Length = 1114

 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 59/195 (30%), Positives = 90/195 (46%), Gaps = 20/195 (10%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWLSNDYGERFSIS-RQGDISLM 100
           F +  Y  +  E++PV  ++LTVT           ++Y L  D   +F+I+   GDI ++
Sbjct: 162 FDQPSYQEAVFEDVPVGTIILTVTATDADSGNFALIEYSLG-DGESKFAINPTTGDIYVL 220

Query: 101 QCLDYETEDSYRFTVYATDT-------LMTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
             LD E +D Y  T  A D            S  V I V++VND  P+F  PQ+   +  
Sbjct: 221 SSLDREKKDHYILTALAKDNPGDVASNRRENSVQVVIQVLDVNDCRPQFSKPQFSTSV-- 278

Query: 154 IPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIN-DSGHISIVDLSALNTS 210
               +   G+ +  + A D D+G    +T SL GP  + F ++ DSG ++       +  
Sbjct: 279 --YENEPAGTSVITMMATDQDEGPNGELTYSLEGPGVEAFHVDMDSGLVT-TQRPLQSYE 335

Query: 211 TIQLVVVATDTGNPP 225
              L VVATD G PP
Sbjct: 336 KFSLTVVATDGGEPP 350



 Score = 39.7 bits (91), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 32/107 (29%), Positives = 49/107 (45%), Gaps = 8/107 (7%)

Query: 92  SRQGDISLMQCLDYETEDSYRFTVYATDTLMTTSAT---VNISVVNVNDWDPRFRYPQYE 148
           S  G +   + +DYE      FTV A+D      A    V + +V++ND +P F  P Y+
Sbjct: 109 SSAGKVIANRTVDYEEVHWLNFTVRASDNGSPPRAAEIPVYLEIVDINDNNPIFDQPSYQ 168

Query: 149 LFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSIN 194
             +      D+  G++I  V A D D G+   +    G  E  F+IN
Sbjct: 169 EAV----FEDVPVGTIILTVTATDADSGNFALIEYSLGDGESKFAIN 211



 Score = 39.3 bits (90), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 34/124 (27%), Positives = 56/124 (45%), Gaps = 21/124 (16%)

Query: 125 SATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLS 182
           +A + ++V++VND  P+F+      ++  I L   TPG+ +  V A D DKG    VT +
Sbjct: 36  NAKLTVNVLDVNDNTPQFKPFGITYYMERI-LEGATPGTTLIAVAAVDPDKGLNGLVTYT 94

Query: 183 LRGPYEKMFSINDSGHISIVDLSA-----------LNTSTIQLVVVATDTGNPPRQASVP 231
           L         +   G++ + D SA                +   V A+D G+PPR A +P
Sbjct: 95  L-------LDLVPPGYVQLEDSSAGKVIANRTVDYEEVHWLNFTVRASDNGSPPRAAEIP 147

Query: 232 AIMH 235
             + 
Sbjct: 148 VYLE 151


>gi|326673321|ref|XP_003199838.1| PREDICTED: protocadherin alpha-7-like [Danio rerio]
          Length = 792

 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 60/199 (30%), Positives = 98/199 (49%), Gaps = 23/199 (11%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGER----FSISR-QGD 96
           F K  YSV+  EN PV   +L V     ++ ++  V Y L +D  ++    F+++   G+
Sbjct: 244 FIKEVYSVTLNENTPVGTTILRVNATDLDEGQNGVVVYSLGHDVNDKLRKLFNVNPVTGE 303

Query: 97  ISLMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
           I +   LD+E +D Y   + A+D     +TT  +V I + +VND +P+         +P 
Sbjct: 304 IVVTGLLDFEVKDIYEIDIQASDKGIAPLTTDKSVTIKIADVNDNEPQIEVTSLSSTIPE 363

Query: 154 IPLADLTPGSVIGKVEAADGDKG--DRVTLSLRG--PYEKMFSINDSGHISIVDLSALNT 209
               D  PG+ +  +  +D D G   RVT SL    P++ M S  ++ + S+V  SAL+ 
Sbjct: 364 ----DSKPGTTVALISVSDLDSGINGRVTCSLSENIPFQLMPSSQENTY-SLVTTSALDR 418

Query: 210 STI---QLVVVATDTGNPP 225
            TI    + + A D G PP
Sbjct: 419 ETIAHYDITLEAKDAGQPP 437



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 60/263 (22%), Positives = 119/263 (45%), Gaps = 31/263 (11%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVT-----TNKPRDLRVKYWLSNDYGERFSI-----SR 93
           +FS + Y+   +EN      L +V+     T     +  + W       +F+      S 
Sbjct: 457 EFSSSPYAFYVMENNAPGKSLFSVSASDKDTGANSAVSYQIWRDGGAENKFTSFININSE 516

Query: 94  QGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYP----Q 146
            G+I  ++  D+ET  +++F + ATD+    ++++ TVN+ +++ ND  P   YP     
Sbjct: 517 NGEIYALKSFDFETSKTFQFHILATDSGSPSLSSNVTVNVFILDQNDNVPVILYPVSANG 576

Query: 147 YELFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYE-KMFSIND-SGHI-SI 201
               +  IP  ++  G ++ KV A D D G    +  SL+   +  +F+++  +G I ++
Sbjct: 577 SAEGVEEIP-RNVNAGHLVTKVRAYDADIGYNGWLLFSLQEVSDHSLFALDRYTGQIRTL 635

Query: 202 VDLSALNTSTIQLVVVATDTGNPPRQASVPAIMHFPEAIVQQASSKLNSGTSST------ 255
              +  + +  +LV++  D GN    A+   I+   E     A+S + +           
Sbjct: 636 RSFTETDEAQHKLVILVKDNGNVSLSATATVIVKVVEPKEAFAASDVKNAEKDEEENNVT 695

Query: 256 --VLIILGVVLIVLGFVIILLIL 276
             ++I LG V ++    II+LI+
Sbjct: 696 FYLIITLGSVSVLFVISIIVLIV 718



 Score = 41.6 bits (96), Expect = 0.64,   Method: Compositional matrix adjust.
 Identities = 40/142 (28%), Positives = 66/142 (46%), Gaps = 17/142 (11%)

Query: 102 CLDYETEDSYRFTVYATDTL---MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLAD 158
            LD ET   Y  T+ A D     +++  +V + + +VND  P F    Y  ++    + +
Sbjct: 415 ALDRETIAHYDITLEAKDAGQPPLSSVKSVTVQISDVNDNSPEFSSSPYAFYV----MEN 470

Query: 159 LTPGSVIGKVEAADGDKGDRVTLSLR----GPYEKMFS--IN---DSGHISIVDLSALNT 209
             PG  +  V A+D D G    +S +    G  E  F+  IN   ++G I  +      T
Sbjct: 471 NAPGKSLFSVSASDKDTGANSAVSYQIWRDGGAENKFTSFININSENGEIYALKSFDFET 530

Query: 210 S-TIQLVVVATDTGNPPRQASV 230
           S T Q  ++ATD+G+P   ++V
Sbjct: 531 SKTFQFHILATDSGSPSLSSNV 552


>gi|85725282|gb|ABC79259.1| protocadherin-15-CD1 isoform 2 [Mus musculus]
          Length = 1938

 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 61/195 (31%), Positives = 99/195 (50%), Gaps = 14/195 (7%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGER-FSISRQ-GDISLMQ 101
           +F +  YS+   E + +  +LL +         + Y + N   +R F++S   G +SL +
Sbjct: 615 RFPQLMYSLEVSEAMRIGAILLNLQATDREGDPITYAIENGDPQRVFNLSETTGILSLGK 674

Query: 102 CLDYETEDSYRFTVYATDTL--MTTSATVNISVVNVNDWDPRFRYPQYELFLP-HIPLAD 158
            LD E+ D Y   V A+D     T++ATVNI V +VND  P F     + +LP ++ + +
Sbjct: 675 ALDRESTDRYILIVTASDGRPDGTSTATVNIVVTDVNDNAPVF-----DPYLPRNLSVVE 729

Query: 159 LTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDSGHI-SIVDLSALNTSTIQLV 215
               + +G+V A D D G   +V  SL G +  +F I  +G I + V L+       +LV
Sbjct: 730 EEANAFVGQVRATDPDAGINGQVHYSL-GNFNNLFRITSNGSIYTAVKLNREARDHYELV 788

Query: 216 VVATDTGNPPRQASV 230
           VVATD    PR +++
Sbjct: 789 VVATDGAVHPRHSTL 803



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 65/245 (26%), Positives = 110/245 (44%), Gaps = 35/245 (14%)

Query: 6   DFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVL- 64
           DF Q   LV++A Q +     A A+L +     + +   F+   Y    LE+ PV   + 
Sbjct: 356 DFHQKFDLVIKAEQDNGHPLPAFASLHIEILDENNQSPYFTMPSYQGYILESAPVGATIS 415

Query: 65  --LTVTT-----------NKPRDLRVKYWLSNDYGERFSISRQG---DISLMQCLDYETE 108
             L +TT              +D  +  +L NDY   F+++  G    ++L+Q +D E +
Sbjct: 416 ESLNLTTPLRIVALDKDIEDTKDPELHLFL-NDYTSVFTVTPTGITRYLTLLQPVDREEQ 474

Query: 109 DSYRFTVYATDTLMTTS-ATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGK 167
            +Y F + A D +  +    VNI V++ ND  P F    Y++++      D++PG  + +
Sbjct: 475 QTYTFLITAFDGVQESEPVVVNIRVMDANDNTPTFPEISYDVYV----YTDMSPGDSVIQ 530

Query: 168 VEAADGDKGDRVTLSLRGPYEKM------FSIND-SGHISIV-DLSALNTSTIQLVVVAT 219
           + A D D+G    +S    YE +      F IN  +G +SI   +  +   T  L V A+
Sbjct: 531 LTAVDADEGSNGEIS----YEILVGGKGDFVINKTTGLVSIAPGVELIVGQTYALTVQAS 586

Query: 220 DTGNP 224
           D   P
Sbjct: 587 DNAPP 591



 Score = 48.5 bits (114), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 70/233 (30%), Positives = 103/233 (44%), Gaps = 26/233 (11%)

Query: 13   LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKP 72
            LVV A       R++  TL +           F+ + Y+V   ENLP     L +   K 
Sbjct: 787  LVVVATDGAVHPRHSTLTLYIKVLDIDDNSPVFTNSTYTVVVEENLPAGTSFLQIEA-KD 845

Query: 73   RDL--RVKYWL-SNDYGERFSISR-QGDISLMQCLDYET----EDSYRFTVYATD---TL 121
             DL   V Y + S +    F++    G++SL++ LDYE     E S  F   A D   T+
Sbjct: 846  VDLGANVSYRIRSPEVKHLFALHPFTGELSLLRSLDYEAFPDQEASITFLAEAFDIYGTM 905

Query: 122  MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDK----GD 177
                ATV + V ++ND+ P F    Y+  +      D   G+ I  V A D D       
Sbjct: 906  PPGIATVTVIVKDMNDYPPVFSKRIYKGMV----APDAVKGTPITTVYAEDADPPGMPAS 961

Query: 178  RVTL---SLRGPY-EKMFSIN-DSGHI-SIVDLSALNTSTIQLVVVATDTGNP 224
            RV      ++ PY   +F +  DSG + + V+L+   T+  +LVVVA D G P
Sbjct: 962  RVRYRVDDVQFPYPASIFDVEEDSGRVVTRVNLNEEPTTIFKLVVVAFDDGEP 1014


>gi|386118337|gb|AFI99116.1| seven transmembrane protocadherin flamingo [Clytia hemisphaerica]
          Length = 2923

 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 69/244 (28%), Positives = 113/244 (46%), Gaps = 21/244 (8%)

Query: 1   DINEDDFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPV 60
           ++N +D  +  ++ +RAI  ++    A  T+ V     +     F+++ YS++  E    
Sbjct: 291 ELNREDGAERFSIDIRAIDLNDPSNSATTTIRVKVLDVNDNAPTFAESSYSITVDEGQVA 350

Query: 61  NYVLLTVT---TNKPRDLRVKYWLSNDYGER--FSISR-QGDISLMQCLDYETEDSYRFT 114
           N  +LTV     ++  +  ++Y + N    +  F I    G I     LD ET   Y FT
Sbjct: 351 NKYILTVRATDADEGSNQEIRYSIVNKANVQVPFQIDPISGAIKSTDVLDRETHPYYNFT 410

Query: 115 VYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAA 171
           V A D     + T  +V+I++ + ND  P+F    Y+L +P     + T GSV+ K++A 
Sbjct: 411 VRAEDQGKVKLHTDVSVSITLRDKNDNSPKFSKDVYKLSIPE----NTTVGSVVFKLDAV 466

Query: 172 DGDKGDRVTLSLRGPYEK--MFSINDS-GHI---SIVDLSALNTSTIQLVVVATDTGNPP 225
           D D G    +  R P +    F IN S G I     VD       + +  VVA D G+PP
Sbjct: 467 DDDIGQNGVIEFR-PLDSNLRFRINTSTGEIILKEAVDFDKYQRFS-RFTVVAFDKGSPP 524

Query: 226 RQAS 229
           + A+
Sbjct: 525 KYAN 528



 Score = 58.2 bits (139), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 68/240 (28%), Positives = 105/240 (43%), Gaps = 29/240 (12%)

Query: 13  LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVL---LTVTT 69
           L +R    D +  YA   + V+ A  +    +F ++ Y  + LEN  +  V+   L    
Sbjct: 726 LKLRVTDADKKPGYAYFKIEVTDANNN--SPRFGQDVYQWNVLENADIGTVIKSVLATDA 783

Query: 70  NKPRDLRVKYWLS-----NDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDTLMTT 124
           +   + R+ Y L      + +G    ++  G I+  + LD ET  SY   V A+D     
Sbjct: 784 DTGENARITYSLQPGSPIDTFG---IVNDTGAITTKKKLDRETTKSYTLVVKASDHGKPF 840

Query: 125 S----ATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG--DR 178
                ATV I+V +VND  P F    Y   +      D   G+V+G ++A D D+G    
Sbjct: 841 KKFGFATVVITVTDVNDNKPAFTKNLYTFTIEE----DAKIGAVVGHLQATDNDEGRNKE 896

Query: 179 VTLSLRGPYEKMFSIN-DSGHISIVDLSALNTSTIQ---LVVVATDTGNPPRQASVPAIM 234
           V    +    + FSIN +SG I  + L  L+  TI+     V+A D G P  Q S   I+
Sbjct: 897 VRYQFKERKHEYFSINAESGSIRTIKL--LDRETIERFTFEVLAIDQGTPALQTSTSVII 954



 Score = 48.1 bits (113), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 55/214 (25%), Positives = 94/214 (43%), Gaps = 33/214 (15%)

Query: 44  QFSKNEYSVSALENLPVNYVLLT------------VTTNKPRDLRVKYWLSNDYGERFSI 91
           +FSK+ Y +S  EN  V  V+              V   +P D  +++ ++   GE    
Sbjct: 440 KFSKDVYKLSIPENTTVGSVVFKLDAVDDDIGQNGVIEFRPLDSNLRFRINTSTGE---- 495

Query: 92  SRQGDISLMQCLDYETEDSY-RFTVYATDTL---MTTSATVNISVVNVNDWDPRFRYPQY 147
                I L + +D++    + RFTV A D        +  V I++ +VND  PRF    +
Sbjct: 496 -----IILKEAVDFDKYQRFSRFTVVAFDKGSPPKYANTEVEITIEDVNDNAPRFAKRIF 550

Query: 148 ELFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRG--PYEKMFSIN-DSGHISIV 202
           E       + D+  GS + K+ A D D G    +T  L    P +  F ++  SG I++ 
Sbjct: 551 ER--TSDIMEDIKVGSFVYKLSARDRDSGPNGDITFKLEDGLPQDFPFELDPKSGEITVS 608

Query: 203 D-LSALNTSTIQLVVVATDTGNPPRQASVPAIMH 235
             L    T + +  V+A D G+PP++ +   + +
Sbjct: 609 KGLDYETTKSYKFGVIAVDNGHPPKKDTTQVVFN 642



 Score = 47.8 bits (112), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 34/88 (38%), Positives = 45/88 (51%), Gaps = 11/88 (12%)

Query: 93  RQGDISLMQCLDYETEDSYRFTVYATDTLM-----TTSATVNISVVNVNDWDPRFRYPQY 147
           + G+I++ + LDYET  SY+F V A D        TT    NI   NVND +P+F+   Y
Sbjct: 601 KSGEITVSKGLDYETTKSYKFGVIAVDNGHPPKKDTTQVVFNIG--NVNDNNPKFKQSSY 658

Query: 148 ELFLPHIPLADLTPGSVIGKVEAADGDK 175
              +    L D   G  I KVEA D D+
Sbjct: 659 YKEI----LEDTRRGEAIEKVEAFDPDQ 682


>gi|119514225|gb|ABL75888.1| protocadherin 2G13 [Takifugu rubripes]
          Length = 940

 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 62/200 (31%), Positives = 101/200 (50%), Gaps = 21/200 (10%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPR-----DLRVKYW-LSNDYGERFSISRQ-GDI 97
           FS+  Y  S  EN PV+ V++ V+          D+  ++  +S D    FSI ++ G I
Sbjct: 236 FSQAVYKASLPENSPVDTVVMQVSATDADEGVNGDVTYEFGHVSEDVKNVFSIDKKSGQI 295

Query: 98  SLMQCLDYETEDSYRFTVYATDTL-MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
            ++  +DYE+E SY   V A D L +++ A V ISV +VND  P          +P    
Sbjct: 296 KVISVIDYESESSYEIRVKAKDGLGLSSYAKVIISVTDVNDNAPIINIKSLTNPVPE--- 352

Query: 157 ADLTPGSVIG--KVEAADGDKGDRVTLSLRG--PYEKMFSINDSGHISIVDLSALN---T 209
            D++PGS +G   V+  D +K  +V  S++   P++ + SI +  + S+V    L+    
Sbjct: 353 -DVSPGSEVGIINVQDRDSEKNRQVRCSIQQNVPFKLVPSIKN--YYSLVTTGQLDRELV 409

Query: 210 STIQLVVVATDTGNPPRQAS 229
           S   + + ATD G+PP  +S
Sbjct: 410 SDYNITISATDEGSPPLSSS 429



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 71/272 (26%), Positives = 116/272 (42%), Gaps = 35/272 (12%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRDLR----VKYWL--SNDYGERFS--ISRQGD 96
           F +  YS    EN      L +V+   P D R    V Y L  +   G   S  +S  GD
Sbjct: 446 FEEESYSAYVSENNRAGSTLCSVSAGDP-DWRQNGTVIYSLLAAEVNGAPVSSYVSVNGD 504

Query: 97  ISLMQC---LDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYE-- 148
             L+      DYE   S++  V A D     ++++ TV++ + +VND  P+  YP  E  
Sbjct: 505 TGLIHAVRSFDYEQLRSFKVHVMARDNGSPPLSSNVTVSVFISDVNDNSPQILYPAPEGN 564

Query: 149 LFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-DSGHISIV-D 203
            F+  +       GS++ KV A D D G    LS   ++     +FSI   SG I    D
Sbjct: 565 SFMTELVPKAAHGGSLVSKVIAVDADSGQNAWLSYHIVKSSDPGLFSIGVHSGEIRTQRD 624

Query: 204 LSALNTSTIQLVVVATDTGNPPRQASVPAIMHFPEAIVQ----------QASSKLNSGTS 253
           +S  ++    L+V   D G P   A+    +   + + +          + +SKL   TS
Sbjct: 625 ISESDSMKQNLIVAVKDNGQPSLSATCSMYLLISDNLAEVPELKDISYDEKNSKL---TS 681

Query: 254 STVLIILGVVLIVLGFVIILLILYIHKNKHTK 285
             ++ ++ V    L F+II+L +   + +  +
Sbjct: 682 YLIIALVSVSTFFLTFIIIILGVRFCRRRKPR 713


>gi|12483917|gb|AAG53891.1|AF281899_1 protocadherin [Mus musculus]
          Length = 1943

 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 61/195 (31%), Positives = 99/195 (50%), Gaps = 14/195 (7%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGER-FSISRQ-GDISLMQ 101
           +F +  YS+   E + +  +LL +         + Y + N   +R F++S   G +SL +
Sbjct: 620 RFPQLMYSLEVSEAMRIGAILLNLQATDREGDPITYAIENGDPQRVFNLSETTGILSLGK 679

Query: 102 CLDYETEDSYRFTVYATDTL--MTTSATVNISVVNVNDWDPRFRYPQYELFLP-HIPLAD 158
            LD E+ D Y   V A+D     T++ATVNI V +VND  P F     + +LP ++ + +
Sbjct: 680 ALDRESTDRYILIVTASDGRPDGTSTATVNIVVTDVNDNAPVF-----DPYLPRNLSVVE 734

Query: 159 LTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDSGHI-SIVDLSALNTSTIQLV 215
               + +G+V A D D G   +V  SL G +  +F I  +G I + V L+       +LV
Sbjct: 735 EEANAFVGQVRATDPDAGINGQVHYSL-GNFNNLFRITSNGSIYTAVKLNREARDHYELV 793

Query: 216 VVATDTGNPPRQASV 230
           VVATD    PR +++
Sbjct: 794 VVATDGAVHPRHSTL 808



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 65/245 (26%), Positives = 110/245 (44%), Gaps = 35/245 (14%)

Query: 6   DFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVL- 64
           DF Q   LV++A Q +     A A+L +     + +   F+   Y    LE+ PV   + 
Sbjct: 361 DFHQKFDLVIKAEQDNGHPLPAFASLHIEILDENNQSPYFTMPSYQGYILESAPVGATIS 420

Query: 65  --LTVTT-----------NKPRDLRVKYWLSNDYGERFSISRQG---DISLMQCLDYETE 108
             L +TT              +D  +  +L NDY   F+++  G    ++L+Q +D E +
Sbjct: 421 ESLNLTTPLRIVALDKDIEDTKDPELHLFL-NDYTSVFTVTPTGITRYLTLLQPVDREEQ 479

Query: 109 DSYRFTVYATDTLMTTS-ATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGK 167
            +Y F + A D +  +    VNI V++ ND  P F    Y++++      D++PG  + +
Sbjct: 480 QTYTFLITAFDGVQESEPVVVNIRVMDANDNTPTFPEISYDVYV----YTDMSPGDSVIQ 535

Query: 168 VEAADGDKGDRVTLSLRGPYEKM------FSIND-SGHISIV-DLSALNTSTIQLVVVAT 219
           + A D D+G    +S    YE +      F IN  +G +SI   +  +   T  L V A+
Sbjct: 536 LTAVDADEGSNGEIS----YEILVGGKGDFVINKTTGLVSIAPGVELIVGQTYALTVQAS 591

Query: 220 DTGNP 224
           D   P
Sbjct: 592 DNAPP 596



 Score = 48.1 bits (113), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 70/233 (30%), Positives = 103/233 (44%), Gaps = 26/233 (11%)

Query: 13   LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKP 72
            LVV A       R++  TL +           F+ + Y+V   ENLP     L +   K 
Sbjct: 792  LVVVATDGAVHPRHSTLTLYIKVLDIDDNSPVFTNSTYTVVVEENLPAGTSFLQIEA-KD 850

Query: 73   RDL--RVKYWL-SNDYGERFSISR-QGDISLMQCLDYET----EDSYRFTVYATD---TL 121
             DL   V Y + S +    F++    G++SL++ LDYE     E S  F   A D   T+
Sbjct: 851  VDLGANVSYRIRSPEVKHLFALHPFTGELSLLRSLDYEAFPDQEASITFLAEAFDIYGTM 910

Query: 122  MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDK----GD 177
                ATV + V ++ND+ P F    Y+  +      D   G+ I  V A D D       
Sbjct: 911  PPGIATVTVIVKDMNDYPPVFSKRIYKGMV----APDAVKGTPITTVYAEDADPPGMPAS 966

Query: 178  RVTL---SLRGPY-EKMFSIN-DSGHI-SIVDLSALNTSTIQLVVVATDTGNP 224
            RV      ++ PY   +F +  DSG + + V+L+   T+  +LVVVA D G P
Sbjct: 967  RVRYRVDDVQFPYPASIFDVEEDSGRVVTRVNLNEEPTTIFKLVVVAFDDGEP 1019


>gi|441600758|ref|XP_004087637.1| PREDICTED: protocadherin-15 isoform 1 [Nomascus leucogenys]
          Length = 1674

 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 62/195 (31%), Positives = 100/195 (51%), Gaps = 14/195 (7%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGER-FSISRQ-GDISLMQ 101
           +F +  YS+   E + V  VLL +         V Y + N   +R F++S   G ++L +
Sbjct: 615 RFPQLMYSLEISEAMRVGAVLLNLQATDREGDSVTYAIENGDPQRVFNLSETTGILTLGK 674

Query: 102 CLDYETEDSYRFTVYATDTL--MTTSATVNISVVNVNDWDPRFRYPQYELFLP-HIPLAD 158
            LD E+ D Y   + A+D     T++ATVNI V +VND  P F     + +LP ++ + +
Sbjct: 675 ALDRESTDRYILIITASDGRPGGTSTATVNIVVTDVNDNAPVF-----DPYLPRNLSVVE 729

Query: 159 LTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDSGHI-SIVDLSALNTSTIQLV 215
               + +G+V+A D D G   +V  SL G +  +F I  +G I + V L+       +LV
Sbjct: 730 EEANAFVGQVKATDPDAGINGQVHYSL-GNFNNLFRITSNGSIYTAVKLNREVRDYYELV 788

Query: 216 VVATDTGNPPRQASV 230
           VVATD    PR +++
Sbjct: 789 VVATDGAVHPRHSTL 803



 Score = 55.5 bits (132), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 49/189 (25%), Positives = 86/189 (45%), Gaps = 23/189 (12%)

Query: 6   DFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVN---- 61
           DF Q   LV++A Q +     A A+L +     + +   F+   Y    LE+ PV     
Sbjct: 356 DFHQKFDLVIKAEQDNGHPLPAFASLHIEILDENNQSPYFTMPSYQGYILESAPVGATIS 415

Query: 62  ----------YVLLTVTTNKPRDLRVKYWLSNDYGERFSISRQG---DISLMQCLDYETE 108
                      V L       +D  +  +L NDY   F++++ G    ++L+Q +D E +
Sbjct: 416 DSLNLTSPLRIVALDKDIEDTKDPELHLFL-NDYTSVFTVTQTGITRYLTLLQPVDREEQ 474

Query: 109 DSYRFTVYATDTLMTTS-ATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGK 167
            +Y F++ A D +  +    VNI V++ ND  P F    Y++++      D+ PG  + +
Sbjct: 475 QTYTFSITAFDGVQESEPVIVNIQVMDANDNTPTFPEISYDVYV----YTDMRPGDSVIQ 530

Query: 168 VEAADGDKG 176
           + A D D+G
Sbjct: 531 LTAVDADEG 539



 Score = 51.2 bits (121), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 71/233 (30%), Positives = 103/233 (44%), Gaps = 26/233 (11%)

Query: 13   LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKP 72
            LVV A       R++  TL +           F+ + Y+V   ENLP    +L +   K 
Sbjct: 787  LVVVATDGAVHPRHSTLTLAIKVLDIDDNSPVFTNSTYTVLVEENLPAGTTILQIEA-KD 845

Query: 73   RDL--RVKYWLSNDYGERFSISR--QGDISLMQCLDYET----EDSYRFTVYATD---TL 121
             DL   V Y + +   + F       G++SL++ LDYE     E S  F V A D   T+
Sbjct: 846  VDLGANVSYRIRSPEVKHFFALHPFTGELSLLRSLDYEAFPDQEASITFLVEAFDIYGTM 905

Query: 122  MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDK----GD 177
                ATV + V ++ND+ P F    Y+  +      D   G+ I  V A D D       
Sbjct: 906  PPGIATVTVIVKDMNDYPPVFSKRIYKGMV----APDAVKGTPITTVYAEDADPPGLPAS 961

Query: 178  RVTLSL---RGPY-EKMFSIN-DSGH-ISIVDLSALNTSTIQLVVVATDTGNP 224
            RV   +   + PY   +F +  DSG  I+ V+L+   T+  +LVVVA D G P
Sbjct: 962  RVRYRIDDVQFPYPASIFDVEEDSGRVITRVNLNEEPTTIFKLVVVAFDDGEP 1014



 Score = 46.2 bits (108), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 56/119 (47%), Gaps = 8/119 (6%)

Query: 76  RVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDTLMT---TSATVNISV 132
           +V Y L N +   F I+  G I     L+ E  D Y   V ATD  +    ++ T+ I V
Sbjct: 751 QVHYSLGN-FNNLFRITSNGSIYTAVKLNREVRDYYELVVVATDGAVHPRHSTLTLAIKV 809

Query: 133 VNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMF 191
           ++++D  P F    Y + +      +L  G+ I ++EA D D G  V+  +R P  K F
Sbjct: 810 LDIDDNSPVFTNSTYTVLVEE----NLPAGTTILQIEAKDVDLGANVSYRIRSPEVKHF 864


>gi|347543905|gb|AEP02525.1| CDH23, partial [Eonycteris spelaea]
          Length = 3276

 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 59/195 (30%), Positives = 90/195 (46%), Gaps = 20/195 (10%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWLSNDYGERFSIS-RQGDISLM 100
            F +  Y  +  E++PV  ++LTVT           ++Y L +  G +FSI+   GDI ++
Sbjct: 2394 FDQPSYQEAVFEDVPVGTIILTVTATDADSGNFALIEYSLGDGEG-KFSINPTTGDIYVL 2452

Query: 101  QCLDYETEDSYRFTVYATD-------TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
              LD E +D Y  T  A D            S  V I V++VND  P+F  PQ+   +  
Sbjct: 2453 SSLDREKKDHYILTALAKDNPGDIASNRRENSVQVVIQVLDVNDCRPQFSKPQFSTSV-- 2510

Query: 154  IPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIN-DSGHISIVDLSALNTS 210
                +   G+ +  + A D D+G    +  SL GP  + F ++ DSG ++       +  
Sbjct: 2511 --YENEPAGTSVITMMATDQDEGTNGELAYSLEGPGVEAFHVDMDSGLVT-TKRPLHSYE 2567

Query: 211  TIQLVVVATDTGNPP 225
               L VVATD G PP
Sbjct: 2568 RFNLTVVATDGGEPP 2582



 Score = 52.4 bits (124), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 63/210 (30%), Positives = 98/210 (46%), Gaps = 28/210 (13%)

Query: 45  FSKNEYSVSALENLPVNYVLLTV--TTNKPRDL-RVKYWLSNDYGERFSISRQ-GDISLM 100
           FS+  Y++S  EN+ V   +LTV  T N       V Y+ S+D  +RFS+ +  G I L+
Sbjct: 452 FSQPLYNISLYENVTVGTSVLTVLATDNDVGTFGEVNYFFSDD-PDRFSLDKDTGLIMLI 510

Query: 101 QCLDYETEDSYRFTVYATDTL-MTTSATVNISVVNVNDWDPRFRYPQYELFL----PHIP 155
             LDYE    +  T+ A D     T+  V I+V++VND  P F+   Y   L    P + 
Sbjct: 511 ARLDYELIQRFTLTIIARDGGGEETTGRVRINVLDVNDNVPTFQKDAYVGALRENEPSV- 569

Query: 156 LADLTPGSVIGKVEAADGDK--GDRVTLSL-----RGPYEKMFSINDSGHISI---VDLS 205
                  + + ++ A D D    +++T S+      G Y  +      G IS+   +D  
Sbjct: 570 -------TQLVRLRATDEDSPPNNQITYSIVNASAFGSYFDISIYEGYGVISVSHPLDYE 622

Query: 206 ALNTSTIQLVVVATDTGNPPRQASVPAIMH 235
            +    I L V+A D GNPP  ++VP  + 
Sbjct: 623 QIPNGLIYLTVMAKDAGNPPLNSTVPVTIE 652



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 67/218 (30%), Positives = 100/218 (45%), Gaps = 44/218 (20%)

Query: 45  FSKNEYSVSALENLPVNY-VLLTVTTNKPRDLRVKYWLSNDYGE-----------RFSI- 91
           FSK  Y VS +EN+     VL    T+  R        S +YG+           +F I 
Sbjct: 663 FSKPAYFVSVVENIMAGATVLFLNATDLDR--------SREYGQESIIYSLEGSSQFRIN 714

Query: 92  SRQGDISLMQCLDYETEDSYRFTVYATD-----TLMTTSATVNISVVNVNDWDPRFRYPQ 146
           +R G+I+    LD ET+  Y   V A D        T  ATVNI+++++ND  P ++   
Sbjct: 715 ARSGEITTTSLLDRETKSEYILIVRAVDGGVGHNQKTGIATVNITLLDINDNHPTWKDAP 774

Query: 147 YELFLPHIPLADLT-PGSVIGKVEAADGDKGDRVTL--SLRGPYEKMFSINDS-GHIS-- 200
           Y     +I L ++T P S +  V A D D G+  TL  S++ P  K +S+N S G I   
Sbjct: 775 Y-----YINLVEMTPPDSDVTTVVAVDPDLGENGTLVYSIQPP-NKFYSLNSSTGKIRTT 828

Query: 201 --IVDLSALNTSTIQL----VVVATDTGNPPRQASVPA 232
             ++D    +    +L    +V   D G PP +A+  A
Sbjct: 829 HVMLDRENPDPQEAELMRKIIVSVRDCGRPPLRATSSA 866



 Score = 47.8 bits (112), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 60/204 (29%), Positives = 91/204 (44%), Gaps = 25/204 (12%)

Query: 43   LQFSKNEYSVSALENLPVNYVLLTVTTNKPRDL-----RVKYWLSNDYGERFSISR-QGD 96
            +QFS   Y  S LENL +   ++ V      ++     R   + S      F I    G 
Sbjct: 1303 VQFSNTSYEASILENLALGTEIVRVQAYSIDNINQITYRFDAYTSAQAKALFRIDAITGV 1362

Query: 97   ISLMQCLDYETEDSYRFTVYATDTLMTTSATVN--ISVVNVNDWDPRFRYPQYELFLPHI 154
            I++   +D E  D Y  TV A D      +TV   I+V++ ND  PRF +    +    +
Sbjct: 1363 ITVKGLVDREKGDFYTLTVVADDGGPKVDSTVKVYITVLDENDNSPRFDFTSDSVV--SV 1420

Query: 155  PLADLTPGSVIGKVEAADGDKGD--RVTLSLR-----GPYEKMFSINDS-GHISI---VD 203
            P  D   G  +  V+A D D G   +V  SL      G +E + + NDS G + +   +D
Sbjct: 1421 P-EDCPVGQRVATVKARDPDAGSNGQVVFSLASGNVAGAFE-IITTNDSVGEVFVARPLD 1478

Query: 204  LSALNTSTIQLVVVATDTGNPPRQ 227
               L+   ++  VVA+D G PPR+
Sbjct: 1479 REELDHYILK--VVASDRGTPPRK 1500



 Score = 43.1 bits (100), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 62/235 (26%), Positives = 103/235 (43%), Gaps = 45/235 (19%)

Query: 65   LTVTTNKPRDLRVKYWLS---NDYGERFSIS----------------RQGDISLMQCLDY 105
            ++V+ + PRD RV  WL+   ND G    +S                R   +  +  LD 
Sbjct: 994  VSVSEDVPRDFRV-VWLNCTDNDVGLNAELSYFITGGNVDGKFRVGYRDAVVRTVVNLDR 1052

Query: 106  ETEDSYRFTVYATDT-----LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLT 160
            ET  +Y   + A D        T +ATV ++V++VND  P F    YE  +P     D+ 
Sbjct: 1053 ETTAAYTLVLEAIDNGPVGKRHTGTATVFVTVLDVNDNRPIFLQSSYEASVPE----DIP 1108

Query: 161  PGSVIGKVEAADGDKGD--RVTLS-LRGPYEKMFSINDSGHISIVDLSALNT---STIQL 214
             G  I ++ A D D+G+  RV    L G +   F I+ S  + +     L+    S+  L
Sbjct: 1109 EGHSIVQLMATDADEGEFGRVWYRILHGNHGNNFRIHVSSGLLMRGPQPLDREQDSSHVL 1168

Query: 215  VVVATDTGNPPRQASVPAIMHFPE------AIVQQASSKL----NSGTSSTVLII 259
            +V A +    P ++SV  I++  +         QQ  S+L     +G  ++V+++
Sbjct: 1169 IVEAYNHDLGPMRSSVRVIVYVEDVNDEAPVFTQQQYSRLALRETAGIGTSVIVV 1223



 Score = 43.1 bits (100), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 42/148 (28%), Positives = 69/148 (46%), Gaps = 19/148 (12%)

Query: 44  QFSKNEYSVSALENLPVNYVL--LTVTTNKPRDLRV----KYWLSNDYGERF-----SIS 92
           +F+ +EYSV+  E   V + L       +K  +L +    + +L  +    F     S+ 
Sbjct: 339 EFNSSEYSVAITELAQVGFALPLFIQVVDKDENLGLNSMFEVYLVGNNSHHFIISPTSVQ 398

Query: 93  RQGDISLMQC--LDYETEDSYRFTVYATDTL--MTTSATVNISVVNVNDWDPRFRYPQYE 148
            + DI +     LDYET D Y F ++A +++      A V I+++N ND  P F  P Y 
Sbjct: 399 GKADIRIRVAIPLDYETVDRYDFDLFANESVPDHVGYAKVKITLINENDNRPIFSQPLYN 458

Query: 149 LFLPHIPLADLTPGSVIGKVEAADGDKG 176
           + L      ++T G+ +  V A D D G
Sbjct: 459 ISL----YENVTVGTSVLTVLATDNDVG 482



 Score = 40.0 bits (92), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 33/107 (30%), Positives = 49/107 (45%), Gaps = 8/107 (7%)

Query: 92   SRQGDISLMQCLDYETEDSYRFTVYATDTLMTTSAT---VNISVVNVNDWDPRFRYPQYE 148
            S  G +   + +DYE      FTV A+D      A    V + +V++ND +P F  P Y+
Sbjct: 2341 SSAGKVIANRTVDYEEVHWLNFTVRASDNGSPPRAAEIPVYLEIVDINDNNPIFDQPSYQ 2400

Query: 149  LFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSIN 194
              +      D+  G++I  V A D D G+   +    G  E  FSIN
Sbjct: 2401 EAV----FEDVPVGTIILTVTATDADSGNFALIEYSLGDGEGKFSIN 2443



 Score = 38.5 bits (88), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 58/203 (28%), Positives = 87/203 (42%), Gaps = 22/203 (10%)

Query: 31  LIVSKAGTSLRELQFSKNEYSVSAL---ENLPVNYVLLTVTTNKPRDLR---VKYWLSND 84
           +++S     +  L F  N +  + L   E+ PV     +VT    RD+    + + +S +
Sbjct: 8   VLISGCWGQVNRLPFFTNHFFDTYLLISEDTPVGS---SVTQLLARDMDNDPLVFGVSGE 64

Query: 85  YGERFSISR--QGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRF 142
              RF       G + L Q LD ET+  +      +D     +  VNI V +VND  P F
Sbjct: 65  EASRFFAVEPDTGVVWLRQPLDRETKSEFTVEFSVSDHQGVITRKVNIQVGDVNDNAPTF 124

Query: 143 RYPQYELFLPHIPLADLTP-GSVIGKVEAADGD--KGDRVTLSLRGPYEKMFSINDSGHI 199
               Y + +P     + TP G+ I  V A D D   G  V  S + P  + F+I+ +  I
Sbjct: 125 HNQPYSVRIP-----ENTPVGTPIFIVNATDPDLGAGGSVLYSFQPP-SQFFAIDSARGI 178

Query: 200 SIV--DLSALNTSTIQLVVVATD 220
             V  +L    T   QL V ATD
Sbjct: 179 VTVTRELDYEITQAYQLTVNATD 201



 Score = 37.7 bits (86), Expect = 9.0,   Method: Compositional matrix adjust.
 Identities = 65/286 (22%), Positives = 121/286 (42%), Gaps = 61/286 (21%)

Query: 4    EDDFL-QPITLVVRA----IQYDNQDRYALATLIVSK-----AGTSL-----RELQFSKN 48
            +D FL  P+T V+R     I  + Q+ Y L  +   +     +GT++      ++   + 
Sbjct: 2105 QDRFLIHPVTGVIRVGNATIDREEQESYRLTVVATDRGTVPLSGTAIITILIDDINDCRP 2164

Query: 49   EY-----SVSALENLPVNYVLLTVTTNKPRDL--RVKYW----LSNDYGER--------F 89
            E+     +VS LE+     V+  VT    RDL  +++Y     L+ D  +R        F
Sbjct: 2165 EFLNPIQTVSVLESAEPGTVIANVTAID-RDLNPKLEYHIIGILAKDDTDRLVPDQEDAF 2223

Query: 90   SIS-RQGDISLMQCLDYETEDSYRFTVYATD--------TLMTTSATVNISVVNVNDWDP 140
            +++   G + +   L+ E   +Y  T+   D        ++   +A + +++++VND  P
Sbjct: 2224 AVNINTGSVMVKSPLNRELVATYEVTLSVIDNASDLPERSVSVPNAKLTVNILDVNDNTP 2283

Query: 141  RFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSGHIS 200
            +F+ P    +     L   TPG+ +  V A D DKG    ++       +  +   G++ 
Sbjct: 2284 QFK-PFGITYYTERVLEGATPGTTLIAVAAVDPDKGLNGLITY-----TLLDLVPPGYVQ 2337

Query: 201  IVDLSA-----------LNTSTIQLVVVATDTGNPPRQASVPAIMH 235
            + D SA                +   V A+D G+PPR A +P  + 
Sbjct: 2338 LEDSSAGKVIANRTVDYEEVHWLNFTVRASDNGSPPRAAEIPVYLE 2383


>gi|395504794|ref|XP_003756732.1| PREDICTED: uncharacterized protein LOC100928159 [Sarcophilus
            harrisii]
          Length = 2721

 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 64/230 (27%), Positives = 103/230 (44%), Gaps = 22/230 (9%)

Query: 13   LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKP 72
            LV+ A+   +  R   A L VS    +     F ++ Y +S LE+ P   +L+ +    P
Sbjct: 1026 LVLTAVDGGSPPRSGTAELKVSVLDVNDNAPAFEQSSYRISVLESAPAGTLLVQLNATDP 1085

Query: 73   ---RDLRVKYWLSNDYGER----FSI-SRQGDISLMQCLDYETEDSYRFTVYATD---TL 121
                   + +  SN   ER    F + S  G ++L   LD+ET++ Y F V A D     
Sbjct: 1086 DQGSSGNITFSFSNHTPERVRSLFGLHSTTGQVTLRGPLDFETDNYYEFDVRARDGGTPA 1145

Query: 122  MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLAD-LTPGSVIGKVEAADGDKGDRVT 180
            M    ++ + V++VND       PQ  L      L +   PG+V+  +   D D G    
Sbjct: 1146 MEQHCSLRVDVLDVND-----NAPQITLTSELGTLRESAEPGTVVALISVQDPDSGPNGD 1200

Query: 181  LSLRGPYEKMFSINDS--GHISIVDLSALN---TSTIQLVVVATDTGNPP 225
            +SLR P    F++  +     S+V  +AL+    S  ++ V A+D G+PP
Sbjct: 1201 VSLRIPEHLPFALKSAFKNQFSLVTATALDREVESKYEIPVTASDAGSPP 1250



 Score = 46.6 bits (109), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 73/307 (23%), Positives = 129/307 (42%), Gaps = 51/307 (16%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWL------SNDYGERFSISRQ 94
           Q +K  Y V   EN      +L +T    + P + R+ + L      +   G  F++  +
Sbjct: 456 QATKPSYDVYVEENNLAGIAILNLTVWDPDAPNNARLSFSLLDRNHQTGLVGRYFALHPE 515

Query: 95  -GDISLMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELF 150
            G +S +  LDYE +  +  TV  +D     ++T+ +VN+ V++ ND  P+  YP+    
Sbjct: 516 SGVLSALVPLDYEDQREFELTVLVSDGGDPPLSTNISVNVFVIDRNDNAPQILYPRSG-- 573

Query: 151 LPHIPLADLTPGS----VIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-DSGHISIV 202
                   L  GS    ++ +V   D D G    LS   L    + +FS+   +G IS  
Sbjct: 574 --RSSTQSLPRGSGASHLLTRVVGWDADAGHNAWLSYSLLGASNQSLFSVGLRTGEISTT 631

Query: 203 DLSALNTSTI-QLVVVATDTGNPPRQAS----------VP-AIMHFPEAIVQQASSKLNS 250
                N     +L ++  D G P    +          +P A   FP  +  Q  +K   
Sbjct: 632 RPVQDNDPAWHKLEILIKDNGEPSLSTTVTLTVSVTELLPDAKAEFPSGLAPQEQNK--- 688

Query: 251 GTSSTVLIILGVVLIVLGFVIILL---ILYIHKNKHTKNNGPPGSSHSKNDSFLSNVILP 307
             + T  ++L V+L+ +GF + +L   I  ++K + +K+       +S + + L     P
Sbjct: 689 --NLTFYLLLSVILVSVGFAVTVLGVIIFRVYKWRKSKD------LYSSSGTSLYRTPGP 740

Query: 308 EKHVNVV 314
             HV+ V
Sbjct: 741 SLHVDAV 747



 Score = 45.8 bits (107), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 50/163 (30%), Positives = 77/163 (47%), Gaps = 28/163 (17%)

Query: 89   FSI-SRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRY 144
            FS+ SR G+I ++  +D+E    Y   V A D     M   + V I V + ND  P    
Sbjct: 2074 FSLDSRSGEIRVLGPVDFEESSFYELHVRARDQGQPSMEGHSVVQIEVEDANDNAP---- 2129

Query: 145  PQYELFLPHI--PLADLTP-GSVIGKVEAADGDKG--DRVTLSLR-------GPYEKMFS 192
               E+ L  +  P+ + TP G+V+G     D D G   R+TL +         P+E  +S
Sbjct: 2130 ---EVLLTSLVNPVPEDTPVGTVVGLFNVRDRDSGVNRRLTLEISPNLPFQIKPFENHYS 2186

Query: 193  INDSGHISIVDLSALNTSTIQLVVVATDTGNPPRQASVPAIMH 235
            +  S  +   D  A    TI+L+  A DTG+PP Q S+  +++
Sbjct: 2187 LLTSERL---DREATAHYTIELL--ARDTGSPPLQTSLTILLN 2224



 Score = 44.7 bits (104), Expect = 0.071,   Method: Compositional matrix adjust.
 Identities = 55/202 (27%), Positives = 80/202 (39%), Gaps = 21/202 (10%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTTNKPR---DLRVKYWLSNDYGERFSIS-------R 93
            +FS+  YS    EN P   +L TV  + P    + R+ Y +     +    S        
Sbjct: 2234 RFSQQFYSAYIAENRPPGSLLCTVAASDPDAGDNARLSYSIVGSQIQGTPASSFIYINPE 2293

Query: 94   QGDISLMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQ--YE 148
             G I   +  DYE     + TV   D     +  +AT+ + V++ ND  P   +P+   E
Sbjct: 2294 DGRIFAQRTFDYELLQVLQITVGVRDGGYPALRANATLQVFVLDQNDNSPTVLHPRPGRE 2353

Query: 149  LFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSL----RGPYEKMFSIN-DSGHISIVD 203
               P        PGS++ KV A D D G    LS     +     +F ++  SG +  V 
Sbjct: 2354 AASPQRLRRSAPPGSLVTKVTAVDADSGHNAWLSYSLLPQSTTPGLFQVSAHSGEVRTVR 2413

Query: 204  LSALNTSTIQLVVV-ATDTGNP 224
                  S  QLVVV   D G P
Sbjct: 2414 ALQEGDSDTQLVVVLVRDNGEP 2435



 Score = 44.7 bits (104), Expect = 0.072,   Method: Compositional matrix adjust.
 Identities = 46/189 (24%), Positives = 79/189 (41%), Gaps = 13/189 (6%)

Query: 95   GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYE--L 149
            G +   +  DYE   + +F V A D     ++++ TV + V+++ND  P    P+     
Sbjct: 1331 GAVHATRSFDYEQTQTLQFEVQARDRGDPPLSSTVTVRLFVLDLNDNAPAVLRPRARPGS 1390

Query: 150  FLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIND-SGHISIVDLS 205
              P      +  G ++ KV A D D G    +S   L  P   +F+++  +G I      
Sbjct: 1391 LCPQALPPSVGAGHLVTKVTAVDLDSGYNAWVSYQLLEAPDPSLFAVSRYAGEIRTAVPI 1450

Query: 206  ALNTSTIQLVVVATDTGNPPRQASVPAIMHFPE----AIVQQASSKLNSGTSSTVLIILG 261
              +    +LV+V  D G+PP   SV  ++   E    A+             S + + L 
Sbjct: 1451 PADLPPQKLVIVVKDNGSPPLSTSVTLLVSLEEDSHPALPDLREHSAKPQEESRLTLYLA 1510

Query: 262  VVLIVLGFV 270
            V L+ + FV
Sbjct: 1511 VSLVAICFV 1519



 Score = 41.6 bits (96), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 40/142 (28%), Positives = 66/142 (46%), Gaps = 17/142 (11%)

Query: 102  CLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLAD 158
             LD E E  Y   V A+D     ++T  T+ ++V +VND  P F    +E+F+      +
Sbjct: 1228 ALDREVESKYEIPVTASDAGSPPLSTRRTIFLNVSDVNDNPPSFIQRSHEVFVQE----N 1283

Query: 159  LTPGSVIGKVEAADGDKG--DRVTLSLRGPYEK------MFSIN-DSGHI-SIVDLSALN 208
              PG ++  + A+D D G    ++ SL  P  +        S+N  +G + +        
Sbjct: 1284 NRPGDLLCSLAASDPDSGLNALISYSLLEPRGRDVLASSFISLNPQTGAVHATRSFDYEQ 1343

Query: 209  TSTIQLVVVATDTGNPPRQASV 230
            T T+Q  V A D G+PP  ++V
Sbjct: 1344 TQTLQFEVQARDRGDPPLSSTV 1365



 Score = 40.8 bits (94), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 28/83 (33%), Positives = 41/83 (49%), Gaps = 7/83 (8%)

Query: 103  LDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADL 159
            LD E    Y   + A DT    + TS T+ +++ +VND  PRF    Y  ++      + 
Sbjct: 2193 LDREATAHYTIELLARDTGSPPLQTSLTILLNISDVNDNAPRFSQQFYSAYIAE----NR 2248

Query: 160  TPGSVIGKVEAADGDKGDRVTLS 182
             PGS++  V A+D D GD   LS
Sbjct: 2249 PPGSLLCTVAASDPDAGDNARLS 2271


>gi|218505747|ref|NP_001136220.1| protocadherin-15 isoform SI-2 precursor [Mus musculus]
 gi|85725325|gb|ABC79280.1| protocadherin-15-secreted isoform 2 [Mus musculus]
          Length = 1171

 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 61/195 (31%), Positives = 99/195 (50%), Gaps = 14/195 (7%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGER-FSISRQ-GDISLMQ 101
           +F +  YS+   E + +  +LL +         + Y + N   +R F++S   G +SL +
Sbjct: 615 RFPQLMYSLEVSEAMRIGAILLNLQATDREGDPITYAIENGDPQRVFNLSETTGILSLGK 674

Query: 102 CLDYETEDSYRFTVYATDTL--MTTSATVNISVVNVNDWDPRFRYPQYELFLP-HIPLAD 158
            LD E+ D Y   V A+D     T++ATVNI V +VND  P F     + +LP ++ + +
Sbjct: 675 ALDRESTDRYILIVTASDGRPDGTSTATVNIVVTDVNDNAPVF-----DPYLPRNLSVVE 729

Query: 159 LTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDSGHI-SIVDLSALNTSTIQLV 215
               + +G+V A D D G   +V  SL G +  +F I  +G I + V L+       +LV
Sbjct: 730 EEANAFVGQVRATDPDAGINGQVHYSL-GNFNNLFRITSNGSIYTAVKLNREARDHYELV 788

Query: 216 VVATDTGNPPRQASV 230
           VVATD    PR +++
Sbjct: 789 VVATDGAVHPRHSTL 803



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 65/245 (26%), Positives = 110/245 (44%), Gaps = 35/245 (14%)

Query: 6   DFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVL- 64
           DF Q   LV++A Q +     A A+L +     + +   F+   Y    LE+ PV   + 
Sbjct: 356 DFHQKFDLVIKAEQDNGHPLPAFASLHIEILDENNQSPYFTMPSYQGYILESAPVGATIS 415

Query: 65  --LTVTT-----------NKPRDLRVKYWLSNDYGERFSISRQG---DISLMQCLDYETE 108
             L +TT              +D  +  +L NDY   F+++  G    ++L+Q +D E +
Sbjct: 416 ESLNLTTPLRIVALDKDIEDTKDPELHLFL-NDYTSVFTVTPTGITRYLTLLQPVDREEQ 474

Query: 109 DSYRFTVYATDTLMTTS-ATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGK 167
            +Y F + A D +  +    VNI V++ ND  P F    Y++++      D++PG  + +
Sbjct: 475 QTYTFLITAFDGVQESEPVVVNIRVMDANDNTPTFPEISYDVYV----YTDMSPGDSVIQ 530

Query: 168 VEAADGDKGDRVTLSLRGPYEKM------FSIND-SGHISIV-DLSALNTSTIQLVVVAT 219
           + A D D+G    +S    YE +      F IN  +G +SI   +  +   T  L V A+
Sbjct: 531 LTAVDADEGSNGEIS----YEILVGGKGDFVINKTTGLVSIAPGVELIVGQTYALTVQAS 586

Query: 220 DTGNP 224
           D   P
Sbjct: 587 DNAPP 591



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 71/233 (30%), Positives = 104/233 (44%), Gaps = 26/233 (11%)

Query: 13   LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKP 72
            LVV A       R++  TL +           F+ + Y+V   ENLP     L +   K 
Sbjct: 787  LVVVATDGAVHPRHSTLTLYIKVLDIDDNSPVFTNSTYTVVVEENLPAGTSFLQIEA-KD 845

Query: 73   RDL--RVKYWL-SNDYGERFSISR-QGDISLMQCLDYET----EDSYRFTVYATD---TL 121
             DL   V Y + S +    F++    G++SL++ LDYE     E S  F V A D   T+
Sbjct: 846  VDLGANVSYRIRSPEVKHLFALHPFTGELSLLRSLDYEAFPDQEASITFLVEAFDIYGTM 905

Query: 122  MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDK----GD 177
                ATV + V ++ND+ P F    Y+  +      D   G+ I  V A D D       
Sbjct: 906  PPGIATVTVIVKDMNDYPPVFSKRIYKGMV----APDAVKGTPITTVYAEDADPPGMPAS 961

Query: 178  RVTL---SLRGPY-EKMFSIN-DSGHI-SIVDLSALNTSTIQLVVVATDTGNP 224
            RV      ++ PY   +F +  DSG + + V+L+   T+  +LVVVA D G P
Sbjct: 962  RVRYRVDDVQFPYPASIFDVEEDSGRVVTRVNLNEEPTTIFKLVVVAFDDGEP 1014


>gi|344274597|ref|XP_003409101.1| PREDICTED: cadherin-23 [Loxodonta africana]
          Length = 3663

 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 60/195 (30%), Positives = 92/195 (47%), Gaps = 20/195 (10%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVT---TNKPRDLRVKYWLSNDYGERFSIS-RQGDISLM 100
            F    Y  +  E++PV  V+LTV+   T+     R++Y L +  G +F+I+   GDI ++
Sbjct: 2711 FDHPSYQEAIFEDVPVGTVILTVSATDTDSGNFARIEYSLVDGEG-KFAINPTTGDIYVL 2769

Query: 101  QCLDYETEDSYRFTVYATD-------TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
              LD E +D Y  T  A D            S  V I V++VND  P+F   Q+   +  
Sbjct: 2770 SSLDREKKDHYILTALAKDNPGDVASNRRENSVQVVIQVLDVNDCRPQFSKTQFSTSV-- 2827

Query: 154  IPLADLTPGSVIGKVEAADGDKGDRVTL--SLRGPYEKMFSIN-DSGHISIVDLSALNTS 210
                +   G+ +  + A D D+G    L  SL GP  + F ++ DSG ++       +  
Sbjct: 2828 --YENEPAGTSVITMVATDQDEGPNAELAYSLEGPGAEAFHVDMDSGLVT-TKRPLQSYE 2884

Query: 211  TIQLVVVATDTGNPP 225
               L VVATD G+PP
Sbjct: 2885 RFNLTVVATDGGDPP 2899



 Score = 48.5 bits (114), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 45/141 (31%), Positives = 65/141 (46%), Gaps = 15/141 (10%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDY---GERFSI-SRQGDISLM 100
           F    YSV   EN PV   +  V    P DL     +   +    + F+I S +G ++++
Sbjct: 340 FHNQPYSVRIPENTPVGTPIFIVNATDP-DLGAGGSVLYSFQPPSQFFTIDSARGIVTVI 398

Query: 101 QCLDYETEDSYRFTVYATDT----LMTTSATVNISVVNVNDWDPRF-RYPQYELFLPHIP 155
             LDYET  +Y+ TV ATD      ++T A + I + +V D DP F   P       H P
Sbjct: 399 HELDYETTQAYQLTVNATDQDKTRPLSTLANLAIIITDVQDMDPIFINLPYSTNIYEHSP 458

Query: 156 LADLTPGSVIGKVEAADGDKG 176
                PG+ +  + A D DKG
Sbjct: 459 -----PGTTVRIITAIDQDKG 474



 Score = 48.1 bits (113), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 52/182 (28%), Positives = 89/182 (48%), Gaps = 18/182 (9%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVT-TNKPRDL--RVKYWLSNDYGERFSISR-QGDISLM 100
            FS N  +V  LEN P  + +L VT T++   L   + Y +     +RF I    G I + 
Sbjct: 2378 FSPNALTVHLLENCPPGFSVLQVTATDEDSGLNGELVYRIEAGAQDRFLIHPVTGVIRVS 2437

Query: 101  QC-LDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
               +D E ++SYR TV ATD     ++ +A +++ + ++ND  P F  P   + +    L
Sbjct: 2438 NVTIDREEQESYRLTVVATDRGTVPLSGTAIISVLIEDINDSRPEFLNPIQTVSV----L 2493

Query: 157  ADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSGHI--SIVDLSALNTSTIQL 214
                PG+VI  V A D D   ++   + G    + + +D+ H+  +  D  A+N +T  +
Sbjct: 2494 ESAEPGTVIANVTAIDRDLNPKLEYHIIG----IVAKDDTDHLVPNQEDAFAVNINTGSV 2549

Query: 215  VV 216
            +V
Sbjct: 2550 IV 2551



 Score = 46.6 bits (109), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 66/218 (30%), Positives = 98/218 (44%), Gaps = 44/218 (20%)

Query: 45   FSKNEYSVSALENLPVNY-VLLTVTTNKPRDLRVKYWLSNDYGE-----------RFSI- 91
            FSK  Y VS +EN+     VL    T+  R        S +YG+           +F I 
Sbjct: 980  FSKPAYFVSVVENIMAGATVLFLNATDLDR--------SREYGQESIIYSLEGSSQFRIN 1031

Query: 92   SRQGDISLMQCLDYETEDSYRFTVYATD-----TLMTTSATVNISVVNVNDWDPRFRYPQ 146
            +R G+I+    LD E +  Y   V A D        T   TVNI+++++ND  P ++   
Sbjct: 1032 ARSGEITTTSLLDREMKAEYILIVRAVDGGVAHNQKTGIVTVNITLLDINDNHPTWKDAP 1091

Query: 147  YELFLPHIPLADLT-PGSVIGKVEAADGDKGDRVTL--SLRGPYEKMFSIND-SGHISI- 201
            Y     +I L ++T P S +  V A D D G+  TL  S++ P  K +S+N  +G I   
Sbjct: 1092 Y-----YINLVEMTPPDSDVTTVVAVDPDLGENGTLVYSIQPP-NKFYSLNSTTGKIRTT 1145

Query: 202  -VDLSALNTS------TIQLVVVATDTGNPPRQASVPA 232
             V L   N          +++V  TD G PP +A+  A
Sbjct: 1146 HVMLDRENPDPQEAEFMRKIIVSVTDRGRPPLRATSSA 1183



 Score = 42.7 bits (99), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 48/164 (29%), Positives = 75/164 (45%), Gaps = 24/164 (14%)

Query: 88  RFSISRQ-GDISLMQCLDYETEDSYRFTVYATDTL-MTTSATVNISVVNVNDWDPRFRYP 145
           RFS+ +  G I L+  LDYE    +  TV A D     T+  V I+V++VND  P F+  
Sbjct: 814 RFSLDKDMGLIMLIAKLDYELIQRFTLTVIARDGGGEETTGRVRINVLDVNDNMPTFQKD 873

Query: 146 QYELFL----PHIPLADLTPGSVIGKVEAADGDK--GDRVTLSL-----RGPYEKMFSIN 194
            Y   L    P +        + + ++ A D D    +++T S+      G Y  + +  
Sbjct: 874 AYVGALRENEPSV--------TQLVRLRATDEDSPPNNQITYSVVDASAFGSYFDISTYE 925

Query: 195 DSGHISI---VDLSALNTSTIQLVVVATDTGNPPRQASVPAIMH 235
             G IS+   +D   +    I L V+A D GNPP  ++VP  + 
Sbjct: 926 GYGVISVSRPLDYEQIPNGLIYLTVMARDAGNPPLNSTVPVTIE 969



 Score = 42.4 bits (98), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 35/108 (32%), Positives = 53/108 (49%), Gaps = 10/108 (9%)

Query: 92   SRQGDISLMQCLDYETEDSYRFTVYATDTLMTTSAT---VNISVVNVNDWDPRFRYPQYE 148
            S  G +   + +DYE    + FTV A+D      A    V + +V++ND +P F +P Y+
Sbjct: 2658 SSMGKVIANRTVDYEEVHWFNFTVRASDNGSPPRAAEIPVYLEIVDINDNNPIFDHPSYQ 2717

Query: 149  LFLPHIPLADLTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSIN 194
              +      D+  G+VI  V A D D G+  R+  SL    E  F+IN
Sbjct: 2718 EAI----FEDVPVGTVILTVSATDTDSGNFARIEYSLVD-GEGKFAIN 2760



 Score = 41.2 bits (95), Expect = 0.89,   Method: Compositional matrix adjust.
 Identities = 56/204 (27%), Positives = 89/204 (43%), Gaps = 25/204 (12%)

Query: 43   LQFSKNEYSVSALENLPVNYVLLTVTTNKPRDL-----RVKYWLSNDYGERFSISR-QGD 96
            +QFS   Y  + +ENL +   +  +      +L     R   + S      F I    G 
Sbjct: 1620 VQFSNASYEAAIMENLALGTEIARIQAYSIDNLNQITYRFDTYTSAQAKALFKIDAITGV 1679

Query: 97   ISLMQCLDYETEDSYRFTVYATDTLMTTSATVN--ISVVNVNDWDPRFRY-PQYELFLPH 153
            I++   +D E  D Y  TV A D      +TV   I+V++ ND  P+F +     + +P 
Sbjct: 1680 ITVKGLVDREKGDLYTLTVVADDGGPKADSTVKVYITVLDENDNSPQFDFTSDLAVSVPE 1739

Query: 154  IPLADLTPGSVIGKVEAADGDKGD--RVTLSL-RGPYEKMFSI---NDS-GHISI---VD 203
                D + G  +  V+A D D G   +V  SL  G     F I   NDS G + +   +D
Sbjct: 1740 ----DCSVGQRVATVKAQDPDAGSNGQVVFSLASGNIAGTFEIATTNDSIGEVFVARPLD 1795

Query: 204  LSALNTSTIQLVVVATDTGNPPRQ 227
               L+   ++  ++A+D G PPR+
Sbjct: 1796 REELDHYFLK--IMASDLGTPPRK 1817



 Score = 38.9 bits (89), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 35/123 (28%), Positives = 58/123 (47%), Gaps = 15/123 (12%)

Query: 44  QFSKNEYSVSALENLPVNYVL--LTVTTNKPRDLRV----KYWLSNDYGERF-----SIS 92
           +F+ +EYSV+  E   V + L       +K  +L +    + +L  +    F     S+ 
Sbjct: 565 EFNSSEYSVAITELAQVGFALPLFIQVVDKDENLGLNSMFEVFLVGNNSHHFIISPTSVQ 624

Query: 93  RQGDISLMQC--LDYETEDSYRFTVYATDTL--MTTSATVNISVVNVNDWDPRFRYPQYE 148
            + DI +     LDYET D Y F ++A +++      A V I+++N ND  P F  P Y 
Sbjct: 625 GKADIRIRVAIPLDYETVDRYDFDLFANESVPDHVGYAKVKITLINENDNRPIFSQPLYN 684

Query: 149 LFL 151
           + L
Sbjct: 685 VSL 687



 Score = 38.1 bits (87), Expect = 6.6,   Method: Compositional matrix adjust.
 Identities = 42/131 (32%), Positives = 59/131 (45%), Gaps = 11/131 (8%)

Query: 95  GDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHI 154
           G + L Q LD E++  +      +D     +  VNI V +VND  P F    Y + +P  
Sbjct: 293 GVVWLRQPLDRESKSEFTVEFSVSDHQGVITRKVNIQVGDVNDNAPTFHNQPYSVRIP-- 350

Query: 155 PLADLTP-GSVIGKVEAADGD--KGDRVTLSLRGPYEKMFSINDSGHISIV--DLSALNT 209
              + TP G+ I  V A D D   G  V  S + P  + F+I+ +  I  V  +L    T
Sbjct: 351 ---ENTPVGTPIFIVNATDPDLGAGGSVLYSFQPP-SQFFTIDSARGIVTVIHELDYETT 406

Query: 210 STIQLVVVATD 220
              QL V ATD
Sbjct: 407 QAYQLTVNATD 417


>gi|301774933|ref|XP_002922889.1| PREDICTED: LOW QUALITY PROTEIN: cadherin EGF LAG seven-pass G-type
           receptor 1-like [Ailuropoda melanoleuca]
          Length = 2838

 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 61/229 (26%), Positives = 107/229 (46%), Gaps = 22/229 (9%)

Query: 13  LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTT--- 69
           L V A+ + +  R A   L V+ + T+     F ++EY     ENL V Y +LT+     
Sbjct: 144 LKVSAVDHGSPRRSAATYLTVTVSDTNDHSPVFEQSEYRERVRENLEVGYEVLTIRATDG 203

Query: 70  NKPRDLRVKYWLSNDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDT-----LMT 123
           + P +  ++Y L    G  F I +R G +     +D E   +Y+  V A D       ++
Sbjct: 204 DAPSNANMRYRLLEGAGGVFEIDARSGVVRTRAAVDREEAAAYQLLVEANDQGRNPGPLS 263

Query: 124 TSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS- 182
            +ATV+I V + ND  P+F   +Y + +P     D+   + + +V+A D D+G    +  
Sbjct: 264 ATATVHIVVEDENDNYPQFSEKRYVVQVPE----DVAVNTPVLRVQATDRDQGQNAAIHY 319

Query: 183 --LRGPYEKMFSIND-SGHISIV---DLSALNTSTIQLVVVATDTGNPP 225
             + G  +  F ++  SG + ++   D  A+   T++  + A D G PP
Sbjct: 320 SIVSGNLKGQFYLHSLSGSLDVINPLDFEAIREYTLR--IKAQDGGRPP 366



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 43/145 (29%), Positives = 68/145 (46%), Gaps = 10/145 (6%)

Query: 88  RFSISRQ---GDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRY 144
           RF++S Q   G I+L   LDY+ E  Y   V A+D   + +A V I+V + N   P F+ 
Sbjct: 555 RFALSSQSGGGLITLALPLDYKQERQYVLAVTASDGTRSHTAQVFINVTDANTHRPVFQS 614

Query: 145 PQYELFLPHIPLADLTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSINDSGHI-SI 201
             Y + +      D   G+ I  + A D D G+  R+T  L  P  +     D+G I ++
Sbjct: 615 SHYTVSVSE----DRPVGTSIATISATDEDTGENARITYVLEDPVPQFRIDPDTGTIYTM 670

Query: 202 VDLSALNTSTIQLVVVATDTGNPPR 226
            +L   + +   L + A D G P +
Sbjct: 671 TELDYEDQAAYTLAITARDNGIPQK 695



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 48/166 (28%), Positives = 74/166 (44%), Gaps = 29/166 (17%)

Query: 45  FSKNEYSVSALENLPVNYVLL---TVTTNKPRDLRVKYWLSNDYGER------------- 88
           F  + +  + LEN+P+ + +L    V  +   + R++Y L +                  
Sbjct: 388 FVSSPFQAAVLENVPLGHSVLHIQAVDADAGENARLRYRLVDTASTAVGGGGPAPQDAAS 447

Query: 89  -----FSI-SRQGDISLMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWD 139
                F I +  G I++   LD E  + Y F V A D     M++SA+V+I+V++VND D
Sbjct: 448 PPDFPFQIHNSSGWITVCAELDREDVEHYSFGVEAVDHGSPPMSSSASVSITVLDVNDND 507

Query: 140 PRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRG 185
           P F  P YEL L      D   GS +  + A D D    +T  L G
Sbjct: 508 PVFTQPVYELRLNE----DAAVGSSVLTLRARDQDANSVITYQLTG 549



 Score = 44.7 bits (104), Expect = 0.073,   Method: Compositional matrix adjust.
 Identities = 38/140 (27%), Positives = 65/140 (46%), Gaps = 9/140 (6%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWL-SNDYGERFSISR-QGDISL 99
           F ++E  +   EN PV  V+  +  N P +    ++ Y +   +  E F +    GD+  
Sbjct: 822 FERDELELFVEENSPVGSVVARIRANDPDEGPNAQIMYQIVEGNVPEVFQLDLLSGDLRA 881

Query: 100 MQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPH--IPLA 157
           +  LD+E    Y   V AT   + + ATV+I +++ ND  P    P +++   +     +
Sbjct: 882 LAELDFEVRREYMLVVQATSAPLVSRATVHIRLLDQNDNPPVL--PDFQILFNNYVTNKS 939

Query: 158 DLTPGSVIGKVEAADGDKGD 177
           +  P  VIG+V A D D  D
Sbjct: 940 NSFPTGVIGRVPARDPDLSD 959



 Score = 42.7 bits (99), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 54/209 (25%), Positives = 88/209 (42%), Gaps = 23/209 (11%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTTNKPRDL---RVKYWLSNDYGER----FSI-SRQG 95
           QF    Y VS  EN P    ++ +  + P +    R+ Y +   + ER    F I +  G
Sbjct: 67  QFPLPSYQVSVPENEPAGTTVIELRAHDPDEGEAGRLSYQMEALFDERSNGYFLIDTATG 126

Query: 96  DISLMQCLDYETEDSYRFTVYATD--TLMTTSAT-VNISVVNVNDWDPRFRYPQYELFLP 152
            +S  + LD ET+D++   V A D  +   ++AT + ++V + ND  P F   +Y   + 
Sbjct: 127 AVSTARALDRETKDTHVLKVSAVDHGSPRRSAATYLTVTVSDTNDHSPVFEQSEYRERV- 185

Query: 153 HIPLADLTPGSVIGKVEAADGDKGDRVTLSLR--GPYEKMFSINDSGHI----SIVDLSA 206
                +L  G  +  + A DGD      +  R       +F I+    +    + VD   
Sbjct: 186 ---RENLEVGYEVLTIRATDGDAPSNANMRYRLLEGAGGVFEIDARSGVVRTRAAVDRE- 241

Query: 207 LNTSTIQLVVVATDTGNPPRQASVPAIMH 235
              +  QL+V A D G  P   S  A +H
Sbjct: 242 -EAAAYQLLVEANDQGRNPGPLSATATVH 269


>gi|218505733|ref|NP_001136214.1| protocadherin-15 isoform CD2-1 precursor [Mus musculus]
          Length = 1790

 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 61/195 (31%), Positives = 99/195 (50%), Gaps = 14/195 (7%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGER-FSISRQ-GDISLMQ 101
           +F +  YS+   E + +  +LL +         + Y + N   +R F++S   G +SL +
Sbjct: 627 RFPQLMYSLEVSEAMRIGAILLNLQATDREGDPITYAIENGDPQRVFNLSETTGILSLGK 686

Query: 102 CLDYETEDSYRFTVYATDTL--MTTSATVNISVVNVNDWDPRFRYPQYELFLP-HIPLAD 158
            LD E+ D Y   V A+D     T++ATVNI V +VND  P F     + +LP ++ + +
Sbjct: 687 ALDRESTDRYILIVTASDGRPDGTSTATVNIVVTDVNDNAPVF-----DPYLPRNLSVVE 741

Query: 159 LTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDSGHI-SIVDLSALNTSTIQLV 215
               + +G+V A D D G   +V  SL G +  +F I  +G I + V L+       +LV
Sbjct: 742 EEANAFVGQVRATDPDAGINGQVHYSL-GNFNNLFRITSNGSIYTAVKLNREARDHYELV 800

Query: 216 VVATDTGNPPRQASV 230
           VVATD    PR +++
Sbjct: 801 VVATDGAVHPRHSTL 815



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 66/252 (26%), Positives = 112/252 (44%), Gaps = 42/252 (16%)

Query: 6   DFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVL- 64
           DF Q   LV++A Q +     A A+L +     + +   F+   Y    LE+ PV   + 
Sbjct: 361 DFHQKFDLVIKAEQDNGHPLPAFASLHIEILDENNQSPYFTMPSYQGYILESAPVGATIS 420

Query: 65  --LTVTT------------NKP------RDLRVKYWLSNDYGERFSISRQG---DISLMQ 101
             L +TT            + P      +D  +  +L NDY   F+++  G    ++L+Q
Sbjct: 421 ESLNLTTPLRIVALDKDIEDVPPGGVPTKDPELHLFL-NDYTSVFTVTPTGITRYLTLLQ 479

Query: 102 CLDYETEDSYRFTVYATDTLMTTS-ATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLT 160
            +D E + +Y F + A D +  +    VNI V++ ND  P F    Y++++      D++
Sbjct: 480 PVDREEQQTYTFLITAFDGVQESEPVVVNIRVMDANDNTPTFPEISYDVYV----YTDMS 535

Query: 161 PGSVIGKVEAADGDKGDRVTLSLRGPYEKM------FSIND-SGHISIV-DLSALNTSTI 212
           PG  + ++ A D D+G    +S    YE +      F IN  +G +SI   +  +   T 
Sbjct: 536 PGDSVIQLTAVDADEGSNGEIS----YEILVGGKGDFVINKTTGLVSIAPGVELIVGQTY 591

Query: 213 QLVVVATDTGNP 224
            L V A+D   P
Sbjct: 592 ALTVQASDNAPP 603



 Score = 48.9 bits (115), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 71/233 (30%), Positives = 104/233 (44%), Gaps = 26/233 (11%)

Query: 13   LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKP 72
            LVV A       R++  TL +           F+ + Y+V   ENLP     L +   K 
Sbjct: 799  LVVVATDGAVHPRHSTLTLYIKVLDIDDNSPVFTNSTYTVVVEENLPAGTSFLQIEA-KD 857

Query: 73   RDL--RVKYWL-SNDYGERFSISR-QGDISLMQCLDYET----EDSYRFTVYATD---TL 121
             DL   V Y + S +    F++    G++SL++ LDYE     E S  F V A D   T+
Sbjct: 858  VDLGANVSYRIRSPEVKHLFALHPFTGELSLLRSLDYEAFPDQEASITFLVEAFDIYGTM 917

Query: 122  MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDK----GD 177
                ATV + V ++ND+ P F    Y+  +      D   G+ I  V A D D       
Sbjct: 918  PPGIATVTVIVKDMNDYPPVFSKRIYKGMV----APDAVKGTPITTVYAEDADPPGMPAS 973

Query: 178  RVTL---SLRGPY-EKMFSIN-DSGHI-SIVDLSALNTSTIQLVVVATDTGNP 224
            RV      ++ PY   +F +  DSG + + V+L+   T+  +LVVVA D G P
Sbjct: 974  RVRYRVDDVQFPYPASIFDVEEDSGRVVTRVNLNEEPTTIFKLVVVAFDDGEP 1026


>gi|7019889|dbj|BAA90911.1| unnamed protein product [Homo sapiens]
          Length = 959

 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 78/301 (25%), Positives = 132/301 (43%), Gaps = 33/301 (10%)

Query: 11  ITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVN--------- 61
            TL V+A   + +  ++ A + VS    +    QF  + +S    ENLP++         
Sbjct: 324 FTLTVQASDAEKK-HFSFAVVFVSVLDDNDHAPQFMFSSFSCIVPENLPISSTICSINAL 382

Query: 62  ------YVLLTVTTNKPRDLRVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTV 115
                 Y  LT +   P    + + +S D+         GDI   Q LDYE  + Y  TV
Sbjct: 383 DFDAGPYGELTYSIVSP--CFLTHGMSYDHDLFLIDPLTGDIHAKQILDYENGNKYCLTV 440

Query: 116 YATDTL-MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGD 174
            A D    T S  V + +  +++++P F   QY   LP           +IG+VEA+D D
Sbjct: 441 QAKDKGDATASLVVWVDIEGIDEFEPIFTQDQYFFTLPE----KNKDRQLIGRVEASDAD 496

Query: 175 KG-DRVTLSLRGPYEKMFSINDS-GHISIVDL-----SALNTS-TIQLVVVATDTGNPPR 226
            G D V L   G     FS+N + G+I ++       S LN   T+++ ++A    +  +
Sbjct: 497 AGIDGVILYSLGTSSPFFSVNRTNGNIYLIRALPLIKSQLNKEDTLEMKIIAHSPKSDSK 556

Query: 227 QASVPAIMHFPEAIVQQASSKLNSGTSSTVLIILGVVLIVLGFVIILLILYIHKNKHTKN 286
            AS    ++   +      +   S  S ++++   V LI++  +I++++   HK K T N
Sbjct: 557 FASCTVFVNVSFSSEGTPLAVFASSFSISLVVSFLVFLILICILIVMILR--HKQKDTIN 614

Query: 287 N 287
           N
Sbjct: 615 N 615



 Score = 41.2 bits (95), Expect = 0.90,   Method: Compositional matrix adjust.
 Identities = 38/148 (25%), Positives = 66/148 (44%), Gaps = 19/148 (12%)

Query: 56  ENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTV 115
           EN  V Y +++  +     +  K++ S      +   + G + L+  LD E   S+   +
Sbjct: 169 ENTYVEYSIISGNSQNNFHVETKFFHS-----EYPYKQVGYLVLLHSLDREASASHELVI 223

Query: 116 YATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTP-GSVIGKVEAA 171
            A+D+    ++++A ++I V++VND  P F    Y     H  + + TP GS I  V A 
Sbjct: 224 LASDSGCPPLSSTAVISIQVLDVNDNPPNFSSLSY-----HTHVKESTPLGSHITVVSAN 278

Query: 172 DGDKGDRVTLSLRGPYEKMFSINDSGHI 199
           D D G    +        + S N+ GH 
Sbjct: 279 DRDTGSHAEIIYN-----IISGNEKGHF 301



 Score = 39.7 bits (91), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 41/152 (26%), Positives = 66/152 (43%), Gaps = 15/152 (9%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRD----LRVKYWL--SNDYGERFSISRQGDIS 98
           FS   Y     E+ P+   +  V+ N  RD      + Y +   N+ G  +     G + 
Sbjct: 253 FSSLSYHTHVKESTPLGSHITVVSAND-RDTGSHAEIIYNIISGNEKGHFYLEENTGVLY 311

Query: 99  LMQCLDYETEDSYRFTVYATDTLMT--TSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
           L++ LDYE    +  TV A+D      + A V +SV++ ND  P+F +  +   +P    
Sbjct: 312 LIKPLDYEKMTKFTLTVQASDAEKKHFSFAVVFVSVLDDNDHAPQFMFSSFSCIVPE--- 368

Query: 157 ADLTPGSVIGKVEAADGDKG--DRVTLSLRGP 186
            +L   S I  + A D D G    +T S+  P
Sbjct: 369 -NLPISSTICSINALDFDAGPYGELTYSIVSP 399


>gi|341913678|ref|XP_003403671.1| PREDICTED: cadherin-23-like isoform 1 [Homo sapiens]
 gi|341913680|ref|XP_003403672.1| PREDICTED: cadherin-23-like isoform 2 [Homo sapiens]
          Length = 3354

 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 59/195 (30%), Positives = 90/195 (46%), Gaps = 20/195 (10%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWLSNDYGERFSIS-RQGDISLM 100
            F +  Y  +  E++PV  ++LTVT           ++Y L  D   +F+I+   GDI ++
Sbjct: 2402 FDQPSYQEAVFEDVPVGTIILTVTATDADSGNFALIEYSLG-DGESKFAINPTTGDIYVL 2460

Query: 101  QCLDYETEDSYRFTVYATDT-------LMTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
              LD E +D Y  T  A D            S  V I V++VND  P+F  PQ+   +  
Sbjct: 2461 SSLDREKKDHYILTALAKDNPGDVASNRRENSVQVVIQVLDVNDCRPQFSKPQFSTSV-- 2518

Query: 154  IPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIN-DSGHISIVDLSALNTS 210
                +   G+ +  + A D D+G    +T SL GP  + F ++ DSG ++       +  
Sbjct: 2519 --YENEPAGTSVITMMATDQDEGPNGELTYSLEGPGVEAFHVDMDSGLVT-TQRPLQSYE 2575

Query: 211  TIQLVVVATDTGNPP 225
               L VVATD G PP
Sbjct: 2576 KFSLTVVATDGGEPP 2590



 Score = 54.7 bits (130), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 63/210 (30%), Positives = 99/210 (47%), Gaps = 28/210 (13%)

Query: 45  FSKNEYSVSALENLPVNYVLLTV--TTNKPRDL-RVKYWLSNDYGERFSISRQ-GDISLM 100
           FS+  Y++S  EN+ V   +LTV  T N       V Y+ S+D  +RFS+ +  G I L+
Sbjct: 460 FSQPLYNISLYENVTVGTSVLTVLATDNDAGTFGEVSYFFSDD-PDRFSLDKDTGLIMLI 518

Query: 101 QCLDYETEDSYRFTVYATDTL-MTTSATVNISVVNVNDWDPRFRYPQYELFL----PHIP 155
             LDYE    +  T+ A D     T+  V I+V++VND  P F+   Y   L    P + 
Sbjct: 519 ARLDYELIQRFTLTIIARDGGGEETTGRVRINVLDVNDNVPTFQKDAYVGALRENEPSV- 577

Query: 156 LADLTPGSVIGKVEAADGDK--GDRVTLSL-----RGPYEKMFSINDSGHISI---VDLS 205
                  + + ++ A D D    +++T S+      G Y  +      G IS+   +D  
Sbjct: 578 -------TQLVRLRATDEDSPPNNQITYSIVSASAFGSYFDISLYEGYGVISVSRPLDYE 630

Query: 206 ALNTSTIQLVVVATDTGNPPRQASVPAIMH 235
            ++   I L V+A D GNPP  ++VP  + 
Sbjct: 631 QISNGLIYLTVMAMDAGNPPLNSTVPVTIE 660



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 68/218 (31%), Positives = 102/218 (46%), Gaps = 44/218 (20%)

Query: 45  FSKNEYSVSALENLPVNY-VLLTVTTNKPRDLRVKYWLSNDYGE-----------RFSI- 91
           FSK  Y VS +EN+     VL    T+  R        S +YG+           +F I 
Sbjct: 671 FSKPAYFVSVVENIMAGATVLFLNATDLDR--------SREYGQESIIYSLEGSTQFRIN 722

Query: 92  SRQGDISLMQCLDYETEDSYRFTVYATD-----TLMTTSATVNISVVNVNDWDPRFRYPQ 146
           +R G+I+    LD ET+  Y   V A D        T  ATVNI+++++ND  P ++   
Sbjct: 723 ARSGEITTTSLLDRETKSEYILIVRAVDGGVGHNQKTGIATVNITLLDINDNHPTWKDAP 782

Query: 147 YELFLPHIPLADLT-PGSVIGKVEAADGDKGDRVTL--SLRGPYEKMFSIND-SGHI--- 199
           Y     +I L ++T P S +  V A D D G+  TL  S++ P  K +S+N  +G I   
Sbjct: 783 Y-----YINLVEMTPPDSDVTTVVAVDPDLGENGTLVYSIQPP-NKFYSLNSTTGKIRTT 836

Query: 200 -SIVDLSALNTSTIQL----VVVATDTGNPPRQASVPA 232
            +++D    +    +L    VV  TD G PP +A+  A
Sbjct: 837 HAMLDRENPDPHEAELMRKIVVSVTDCGRPPLKATSSA 874



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 62/204 (30%), Positives = 90/204 (44%), Gaps = 25/204 (12%)

Query: 43   LQFSKNEYSVSALENLPVNYVLLTVTTNKPRDL-----RVKYWLSNDYGERFSISR-QGD 96
            +QFS   Y  + LENL +   ++ V      +L     R   + S      F I    G 
Sbjct: 1311 VQFSNASYEAAILENLALGTEIVRVQAYSIDNLNQITYRFDAYTSTQAKALFKIDAITGV 1370

Query: 97   ISLMQCLDYETEDSYRFTVYATDTLMTTSATVN--ISVVNVNDWDPRFRYPQYELFLPHI 154
            I++   +D E  D Y  TV A D      +TV   I+V++ ND  PRF +         I
Sbjct: 1371 ITVQGLVDREKGDFYTLTVVADDGGPKVDSTVKVYITVLDENDNSPRFDFTSDSAV--SI 1428

Query: 155  PLADLTPGSVIGKVEAADGDKGD--RVTLSLR-----GPYEKMFSINDS-GHISI---VD 203
            P  D   G  +  V+A D D G   +V  SL      G +E + + NDS G + +   +D
Sbjct: 1429 P-EDCPVGQRVATVKAWDPDAGSNGQVVFSLASGNIAGAFE-IVTTNDSIGEVFVARPLD 1486

Query: 204  LSALNTSTIQLVVVATDTGNPPRQ 227
               L+   +Q  VVA+D G PPR+
Sbjct: 1487 REELDHYILQ--VVASDRGTPPRK 1508



 Score = 45.8 bits (107), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 57/215 (26%), Positives = 95/215 (44%), Gaps = 36/215 (16%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVT-TNKPRDL--RVKYWLSNDYGERFSIS------RQG 95
            FS    +V  LEN P  + +L VT T++   L   + Y +     +RF I       R G
Sbjct: 2069 FSPATLTVHLLENCPPGFSVLQVTATDEDSGLNGELVYRIEAGAQDRFLIHLVTGVIRVG 2128

Query: 96   DISLMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLP 152
            + ++    D E ++SYR TV ATD     ++ +A V I + ++ND  P F  P   + + 
Sbjct: 2129 NATI----DREEQESYRLTVVATDRGTVPLSGTAIVTILIDDINDSRPEFLNPIQTVSV- 2183

Query: 153  HIPLADLTPGSVIGKVEAADGDKGDRVTLSLRG------------PYEKMFSIN-DSGHI 199
               L    PG+VI  + A D D   ++   + G              E  F++N ++G +
Sbjct: 2184 ---LESAEPGTVIANITAIDHDLNPKLEYHIVGIVAKDDTDRLVPNQEDAFAVNINTGSV 2240

Query: 200  SI---VDLSALNTSTIQLVVVATDTGNPPRQASVP 231
             +   ++   + T  + L V+   +  P R  SVP
Sbjct: 2241 MVKSPMNRELVATYEVTLSVIDNASDLPERSVSVP 2275



 Score = 44.3 bits (103), Expect = 0.092,   Method: Compositional matrix adjust.
 Identities = 53/199 (26%), Positives = 90/199 (45%), Gaps = 26/199 (13%)

Query: 44  QFSKNEYSVSALENLPVNYVL--LTVTTNKPRDLRV----KYWLSNDYGERF-----SIS 92
           +F+ +EYSV+  E   V + L       +K  +L +    + +L  +    F     S+ 
Sbjct: 347 EFNSSEYSVAITELAQVGFALPLFIQVVDKDENLGLNSMFEVYLVGNNSHHFIISPTSVQ 406

Query: 93  RQGDISLMQC--LDYETEDSYRFTVYATDTL--MTTSATVNISVVNVNDWDPRFRYPQYE 148
            + DI +     LDYET D Y F ++A +++      A V I+++N ND  P F  P Y 
Sbjct: 407 GKADIRIRVAIPLDYETVDRYDFDLFANESVPDHVGYAKVKITLINENDNRPIFSQPLYN 466

Query: 149 LFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDSGHISIVDLSA 206
           + L      ++T G+ +  V A D D G    V+       ++     D+G I ++  + 
Sbjct: 467 ISL----YENVTVGTSVLTVLATDNDAGTFGEVSYFFSDDPDRFSLDKDTGLIMLI--AR 520

Query: 207 LNTSTIQ---LVVVATDTG 222
           L+   IQ   L ++A D G
Sbjct: 521 LDYELIQRFTLTIIARDGG 539



 Score = 44.3 bits (103), Expect = 0.099,   Method: Compositional matrix adjust.
 Identities = 62/235 (26%), Positives = 106/235 (45%), Gaps = 45/235 (19%)

Query: 65   LTVTTNKPRDLRVKYWLS---NDYG---------------ERFSIS-RQGDISLMQCLDY 105
            ++V+ + PR+ RV  WL+   ND G                +FS+  R   +  +  LD 
Sbjct: 1002 VSVSEDVPREFRV-VWLNCTDNDVGLNAELSYFITGGNVDGKFSVGYRDAVVRTVVGLDR 1060

Query: 106  ETEDSYRFTVYATDT-----LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLT 160
            ET  +Y   + A D        T +ATV ++V++VND  P F    YE  +P     D+ 
Sbjct: 1061 ETTAAYMLILEAIDNGPVGKRHTGTATVFVTVLDVNDNRPIFLQSSYEASVPE----DIP 1116

Query: 161  PGSVIGKVEAADGDKGD--RVTLS-LRGPYEKMFSINDSGHISIVDLSALN---TSTIQL 214
             G  I +++A D D+G+  RV    L G +   F I+ S  + +     L+    S+  L
Sbjct: 1117 EGHSILQLKATDADEGEFGRVWYRILHGNHGNNFRIHVSNGLLMRGPRPLDRERNSSHVL 1176

Query: 215  VVVATDTGNPPRQASVPAIMHFPE------AIVQQASSKLN----SGTSSTVLII 259
            +V A +    P ++SV  I++  +         QQ  S+L     +G  ++V+++
Sbjct: 1177 IVEAYNHDLGPMRSSVRVIVYVEDINDEAPVFTQQQYSRLGLRETAGIGTSVIVV 1231



 Score = 41.2 bits (95), Expect = 0.76,   Method: Compositional matrix adjust.
 Identities = 33/107 (30%), Positives = 49/107 (45%), Gaps = 8/107 (7%)

Query: 92   SRQGDISLMQCLDYETEDSYRFTVYATDTLMTTSAT---VNISVVNVNDWDPRFRYPQYE 148
            S  G +   Q +DYE      FTV A+D      A    V + +V++ND +P F  P Y+
Sbjct: 2349 SSAGKVIANQTVDYEEVHWLNFTVRASDNGSLPRAAEIPVYLEIVDINDNNPIFDQPSYQ 2408

Query: 149  LFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSIN 194
              +      D+  G++I  V A D D G+   +    G  E  F+IN
Sbjct: 2409 EAV----FEDVPVGTIILTVTATDADSGNFALIEYSLGDGESKFAIN 2451



 Score = 39.7 bits (91), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 39/119 (32%), Positives = 60/119 (50%), Gaps = 11/119 (9%)

Query: 123 TTSATVNISVVNVNDWDPRFR-YPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTL 181
           T+SATV ++++++ND DP F+  P     L  IP      G  I +V A D D+G    +
Sbjct: 871 TSSATVFVNLLDLNDNDPTFQNLPFVAEVLEGIP-----AGVSIYQVVAIDLDEGLNGLV 925

Query: 182 SLRGP--YEKM-FSINDSGHISI--VDLSALNTSTIQLVVVATDTGNPPRQASVPAIMH 235
           S R P    +M F IN S  + +   +L     +  QL VVA+D G P + ++    +H
Sbjct: 926 SYRMPVGMPRMDFLINSSSGVVVTTTELDRERIAEYQLRVVASDAGTPTKSSTSTLTIH 984



 Score = 39.7 bits (91), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 55/204 (26%), Positives = 85/204 (41%), Gaps = 16/204 (7%)

Query: 27  ALATLIVSKAGTSLRELQFSKNEYSVSAL---ENLPVNYVLLTVTTNKPRDLRVKYWLSN 83
           A   +++S     +  L F  N +  + L   E+ PV   +  +      +  + + +S 
Sbjct: 12  AWLLVLISGCWGQVNRLPFFTNHFFDTYLLISEDTPVGSSVTQLLAQDMDNDPLVFGVSG 71

Query: 84  DYGERFSISR--QGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPR 141
           +   RF       G + L Q LD ET+  +      +D     +  VNI V +VND  P 
Sbjct: 72  EEASRFFAVEPDTGVVWLRQPLDRETKSEFTVEFSVSDHQGVITRKVNIQVGDVNDNAPT 131

Query: 142 FRYPQYELFLPHIPLADLTP-GSVIGKVEAADGD--KGDRVTLSLRGPYEKMFSINDSGH 198
           F    Y + +P     + TP G+ I  V A D D   G  V  S + P  + F+I+ +  
Sbjct: 132 FHNQPYSVRIP-----ENTPVGTPIFIVNATDPDLGAGGSVLYSFQPP-SQFFAIDSARG 185

Query: 199 ISIV--DLSALNTSTIQLVVVATD 220
           I  V  +L    T   QL V ATD
Sbjct: 186 IVTVIRELDYETTQAYQLTVNATD 209


>gi|332834334|ref|XP_003312663.1| PREDICTED: cadherin-23-like isoform 1 [Pan troglodytes]
          Length = 1114

 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 59/195 (30%), Positives = 90/195 (46%), Gaps = 20/195 (10%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWLSNDYGERFSIS-RQGDISLM 100
           F +  Y  +  E++PV  ++LTVT           ++Y L  D   +F+I+   GDI ++
Sbjct: 162 FDQPSYQEAVFEDVPVGTIILTVTATDADSGNFALIEYSLG-DGESKFAINPTTGDIYVL 220

Query: 101 QCLDYETEDSYRFTVYATDT-------LMTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
             LD E +D Y  T  A D            S  V I V++VND  P+F  PQ+   +  
Sbjct: 221 SSLDREKKDHYILTALAKDNPGDVASNRRENSVQVVIQVLDVNDCRPQFSKPQFSTSV-- 278

Query: 154 IPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIN-DSGHISIVDLSALNTS 210
               +   G+ +  + A D D+G    +T SL GP  + F ++ DSG ++       +  
Sbjct: 279 --YENEPAGTSVITMMATDQDEGPNGELTYSLEGPGVEAFHVDMDSGLVT-TQRPLQSYE 335

Query: 211 TIQLVVVATDTGNPP 225
              L VVATD G PP
Sbjct: 336 RFNLTVVATDGGEPP 350



 Score = 39.3 bits (90), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 32/107 (29%), Positives = 49/107 (45%), Gaps = 8/107 (7%)

Query: 92  SRQGDISLMQCLDYETEDSYRFTVYATDTLMTTSAT---VNISVVNVNDWDPRFRYPQYE 148
           S  G +   + +DYE      FTV A+D      A    V + +V++ND +P F  P Y+
Sbjct: 109 SSAGKVIANRTVDYEEVHWLNFTVRASDNGSPPRAAEIPVYLEIVDINDNNPIFDQPSYQ 168

Query: 149 LFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSIN 194
             +      D+  G++I  V A D D G+   +    G  E  F+IN
Sbjct: 169 EAV----FEDVPVGTIILTVTATDADSGNFALIEYSLGDGESKFAIN 211



 Score = 39.3 bits (90), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 57/209 (27%), Positives = 85/209 (40%), Gaps = 34/209 (16%)

Query: 41  RELQFSKNEYSVSALE-----NLPVNYVLLTVTTNKPRDLRVKYWLSNDYGERFSISR-Q 94
            E+    N Y V A +     N  V Y  L    N  RD     W      E F+I    
Sbjct: 384 EEIPLRSNVYEVYATDKDEGLNGAVRYSFLKTAGN--RD-----W------EFFTIDPIS 430

Query: 95  GDISLMQCLDYETEDSYRFTVYATD----TLMTTSATVNISVVNVNDWDPRF-----RYP 145
           G I   Q LD E++  Y   + A+D        T   + +++ +++D +P F       P
Sbjct: 431 GLIQTAQRLDRESQAVYSLILVASDLGQPVPYETMQPLQVALEDIDDNEPLFVRPPKGSP 490

Query: 146 QYELF-LP-HIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSGHISIV- 202
           QY+L  +P H P   L  G+V G V+A +G           G  EK F +   GH+ ++ 
Sbjct: 491 QYQLLTVPEHSPRGTLV-GNVTGAVDADEGPNAIVYYFIAAGNEEKNFHLQPDGHLLVLR 549

Query: 203 DLSALNTSTIQLVVVATD--TGNPPRQAS 229
           DL     +    +V A+   +  PPR  S
Sbjct: 550 DLDREREAIFSFIVKASSNRSWTPPRGPS 578



 Score = 38.9 bits (89), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 34/124 (27%), Positives = 56/124 (45%), Gaps = 21/124 (16%)

Query: 125 SATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLS 182
           +A + ++V++VND  P+F+      ++  I L   TPG+ +  V A D DKG    VT +
Sbjct: 36  NAKLTVNVLDVNDNTPQFKPFGITYYMERI-LEGATPGTTLIAVAAVDPDKGLNGLVTYT 94

Query: 183 LRGPYEKMFSINDSGHISIVDLSA-----------LNTSTIQLVVVATDTGNPPRQASVP 231
           L         +   G++ + D SA                +   V A+D G+PPR A +P
Sbjct: 95  L-------LDLVPPGYVQLEDSSAGKVIANRTVDYEEVHWLNFTVRASDNGSPPRAAEIP 147

Query: 232 AIMH 235
             + 
Sbjct: 148 VYLE 151


>gi|189571674|ref|NP_071407.4| cadherin-23 isoform 1 precursor [Homo sapiens]
 gi|408359994|sp|Q9H251.2|CAD23_HUMAN RecName: Full=Cadherin-23; AltName: Full=Otocadherin; Flags:
            Precursor
          Length = 3354

 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 59/195 (30%), Positives = 90/195 (46%), Gaps = 20/195 (10%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWLSNDYGERFSIS-RQGDISLM 100
            F +  Y  +  E++PV  ++LTVT           ++Y L  D   +F+I+   GDI ++
Sbjct: 2402 FDQPSYQEAVFEDVPVGTIILTVTATDADSGNFALIEYSLG-DGESKFAINPTTGDIYVL 2460

Query: 101  QCLDYETEDSYRFTVYATDT-------LMTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
              LD E +D Y  T  A D            S  V I V++VND  P+F  PQ+   +  
Sbjct: 2461 SSLDREKKDHYILTALAKDNPGDVASNRRENSVQVVIQVLDVNDCRPQFSKPQFSTSV-- 2518

Query: 154  IPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIN-DSGHISIVDLSALNTS 210
                +   G+ +  + A D D+G    +T SL GP  + F ++ DSG ++       +  
Sbjct: 2519 --YENEPAGTSVITMMATDQDEGPNGELTYSLEGPGVEAFHVDMDSGLVT-TQRPLQSYE 2575

Query: 211  TIQLVVVATDTGNPP 225
               L VVATD G PP
Sbjct: 2576 KFSLTVVATDGGEPP 2590



 Score = 54.3 bits (129), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 63/210 (30%), Positives = 99/210 (47%), Gaps = 28/210 (13%)

Query: 45  FSKNEYSVSALENLPVNYVLLTV--TTNKPRDL-RVKYWLSNDYGERFSISRQ-GDISLM 100
           FS+  Y++S  EN+ V   +LTV  T N       V Y+ S+D  +RFS+ +  G I L+
Sbjct: 460 FSQPLYNISLYENVTVGTSVLTVLATDNDAGTFGEVSYFFSDD-PDRFSLDKDTGLIMLI 518

Query: 101 QCLDYETEDSYRFTVYATDTL-MTTSATVNISVVNVNDWDPRFRYPQYELFL----PHIP 155
             LDYE    +  T+ A D     T+  V I+V++VND  P F+   Y   L    P + 
Sbjct: 519 ARLDYELIQRFTLTIIARDGGGEETTGRVRINVLDVNDNVPTFQKDAYVGALRENEPSV- 577

Query: 156 LADLTPGSVIGKVEAADGDK--GDRVTLSL-----RGPYEKMFSINDSGHISI---VDLS 205
                  + + ++ A D D    +++T S+      G Y  +      G IS+   +D  
Sbjct: 578 -------TQLVRLRATDEDSPPNNQITYSIVSASAFGSYFDISLYEGYGVISVSRPLDYE 630

Query: 206 ALNTSTIQLVVVATDTGNPPRQASVPAIMH 235
            ++   I L V+A D GNPP  ++VP  + 
Sbjct: 631 QISNGLIYLTVMAMDAGNPPLNSTVPVTIE 660



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 68/218 (31%), Positives = 102/218 (46%), Gaps = 44/218 (20%)

Query: 45  FSKNEYSVSALENLPVNY-VLLTVTTNKPRDLRVKYWLSNDYGE-----------RFSI- 91
           FSK  Y VS +EN+     VL    T+  R        S +YG+           +F I 
Sbjct: 671 FSKPAYFVSVVENIMAGATVLFLNATDLDR--------SREYGQESIIYSLEGSTQFRIN 722

Query: 92  SRQGDISLMQCLDYETEDSYRFTVYATD-----TLMTTSATVNISVVNVNDWDPRFRYPQ 146
           +R G+I+    LD ET+  Y   V A D        T  ATVNI+++++ND  P ++   
Sbjct: 723 ARSGEITTTSLLDRETKSEYILIVRAVDGGVGHNQKTGIATVNITLLDINDNHPTWKDAP 782

Query: 147 YELFLPHIPLADLT-PGSVIGKVEAADGDKGDRVTL--SLRGPYEKMFSIND-SGHI--- 199
           Y     +I L ++T P S +  V A D D G+  TL  S++ P  K +S+N  +G I   
Sbjct: 783 Y-----YINLVEMTPPDSDVTTVVAVDPDLGENGTLVYSIQPP-NKFYSLNSTTGKIRTT 836

Query: 200 -SIVDLSALNTSTIQL----VVVATDTGNPPRQASVPA 232
            +++D    +    +L    VV  TD G PP +A+  A
Sbjct: 837 HAMLDRENPDPHEAELMRKIVVSVTDCGRPPLKATSSA 874



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 62/204 (30%), Positives = 90/204 (44%), Gaps = 25/204 (12%)

Query: 43   LQFSKNEYSVSALENLPVNYVLLTVTTNKPRDL-----RVKYWLSNDYGERFSISR-QGD 96
            +QFS   Y  + LENL +   ++ V      +L     R   + S      F I    G 
Sbjct: 1311 VQFSNASYEAAILENLALGTEIVRVQAYSIDNLNQITYRFNAYTSTQAKALFKIDAITGV 1370

Query: 97   ISLMQCLDYETEDSYRFTVYATDTLMTTSATVN--ISVVNVNDWDPRFRYPQYELFLPHI 154
            I++   +D E  D Y  TV A D      +TV   I+V++ ND  PRF +         I
Sbjct: 1371 ITVQGLVDREKGDFYTLTVVADDGGPKVDSTVKVYITVLDENDNSPRFDFTSDSAV--SI 1428

Query: 155  PLADLTPGSVIGKVEAADGDKGD--RVTLSLR-----GPYEKMFSINDS-GHISI---VD 203
            P  D   G  +  V+A D D G   +V  SL      G +E + + NDS G + +   +D
Sbjct: 1429 P-EDCPVGQRVATVKAWDPDAGSNGQVVFSLASGNIAGAFE-IVTTNDSIGEVFVARPLD 1486

Query: 204  LSALNTSTIQLVVVATDTGNPPRQ 227
               L+   +Q  VVA+D G PPR+
Sbjct: 1487 REELDHYILQ--VVASDRGTPPRK 1508



 Score = 45.8 bits (107), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 57/215 (26%), Positives = 95/215 (44%), Gaps = 36/215 (16%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVT-TNKPRDL--RVKYWLSNDYGERFSIS------RQG 95
            FS    +V  LEN P  + +L VT T++   L   + Y +     +RF I       R G
Sbjct: 2069 FSPATLTVHLLENCPPGFSVLQVTATDEDSGLNGELVYRIEAGAQDRFLIHLVTGVIRVG 2128

Query: 96   DISLMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLP 152
            + ++    D E ++SYR TV ATD     ++ +A V I + ++ND  P F  P   + + 
Sbjct: 2129 NATI----DREEQESYRLTVVATDRGTVPLSGTAIVTILIDDINDSRPEFLNPIQTVSV- 2183

Query: 153  HIPLADLTPGSVIGKVEAADGDKGDRVTLSLRG------------PYEKMFSIN-DSGHI 199
               L    PG+VI  + A D D   ++   + G              E  F++N ++G +
Sbjct: 2184 ---LESAEPGTVIANITAIDHDLNPKLEYHIVGIVAKDDTDRLVPNQEDAFAVNINTGSV 2240

Query: 200  SI---VDLSALNTSTIQLVVVATDTGNPPRQASVP 231
             +   ++   + T  + L V+   +  P R  SVP
Sbjct: 2241 MVKSPMNRELVATYEVTLSVIDNASDLPERSVSVP 2275



 Score = 44.7 bits (104), Expect = 0.088,   Method: Compositional matrix adjust.
 Identities = 53/199 (26%), Positives = 90/199 (45%), Gaps = 26/199 (13%)

Query: 44  QFSKNEYSVSALENLPVNYVL--LTVTTNKPRDLRV----KYWLSNDYGERF-----SIS 92
           +F+ +EYSV+  E   V + L       +K  +L +    + +L  +    F     S+ 
Sbjct: 347 EFNSSEYSVAITELAQVGFALPLFIQVVDKDENLGLNSMFEVYLVGNNSHHFIISPTSVQ 406

Query: 93  RQGDISLMQC--LDYETEDSYRFTVYATDTL--MTTSATVNISVVNVNDWDPRFRYPQYE 148
            + DI +     LDYET D Y F ++A +++      A V I+++N ND  P F  P Y 
Sbjct: 407 GKADIRIRVAIPLDYETVDRYDFDLFANESVPDHVGYAKVKITLINENDNRPIFSQPLYN 466

Query: 149 LFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDSGHISIVDLSA 206
           + L      ++T G+ +  V A D D G    V+       ++     D+G I ++  + 
Sbjct: 467 ISL----YENVTVGTSVLTVLATDNDAGTFGEVSYFFSDDPDRFSLDKDTGLIMLI--AR 520

Query: 207 LNTSTIQ---LVVVATDTG 222
           L+   IQ   L ++A D G
Sbjct: 521 LDYELIQRFTLTIIARDGG 539



 Score = 44.3 bits (103), Expect = 0.099,   Method: Compositional matrix adjust.
 Identities = 62/235 (26%), Positives = 106/235 (45%), Gaps = 45/235 (19%)

Query: 65   LTVTTNKPRDLRVKYWLS---NDYG---------------ERFSIS-RQGDISLMQCLDY 105
            ++V+ + PR+ RV  WL+   ND G                +FS+  R   +  +  LD 
Sbjct: 1002 VSVSEDVPREFRV-VWLNCTDNDVGLNAELSYFITGGNVDGKFSVGYRDAVVRTVVGLDR 1060

Query: 106  ETEDSYRFTVYATDT-----LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLT 160
            ET  +Y   + A D        T +ATV ++V++VND  P F    YE  +P     D+ 
Sbjct: 1061 ETTAAYMLILEAIDNGPVGKRHTGTATVFVTVLDVNDNRPIFLQSSYEASVPE----DIP 1116

Query: 161  PGSVIGKVEAADGDKGD--RVTLS-LRGPYEKMFSINDSGHISIVDLSALN---TSTIQL 214
             G  I +++A D D+G+  RV    L G +   F I+ S  + +     L+    S+  L
Sbjct: 1117 EGHSILQLKATDADEGEFGRVWYRILHGNHGNNFRIHVSNGLLMRGPRPLDRERNSSHVL 1176

Query: 215  VVVATDTGNPPRQASVPAIMHFPE------AIVQQASSKLN----SGTSSTVLII 259
            +V A +    P ++SV  I++  +         QQ  S+L     +G  ++V+++
Sbjct: 1177 IVEAYNHDLGPMRSSVRVIVYVEDINDEAPVFTQQQYSRLGLRETAGIGTSVIVV 1231



 Score = 39.7 bits (91), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 32/107 (29%), Positives = 49/107 (45%), Gaps = 8/107 (7%)

Query: 92   SRQGDISLMQCLDYETEDSYRFTVYATDTLMTTSAT---VNISVVNVNDWDPRFRYPQYE 148
            S  G +   + +DYE      FTV A+D      A    V + +V++ND +P F  P Y+
Sbjct: 2349 SSAGKVIANRTVDYEEVHWLNFTVRASDNGSPPRAAEIPVYLEIVDINDNNPIFDQPSYQ 2408

Query: 149  LFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSIN 194
              +      D+  G++I  V A D D G+   +    G  E  F+IN
Sbjct: 2409 EAV----FEDVPVGTIILTVTATDADSGNFALIEYSLGDGESKFAIN 2451



 Score = 39.7 bits (91), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 39/119 (32%), Positives = 60/119 (50%), Gaps = 11/119 (9%)

Query: 123 TTSATVNISVVNVNDWDPRFR-YPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTL 181
           T+SATV ++++++ND DP F+  P     L  IP      G  I +V A D D+G    +
Sbjct: 871 TSSATVFVNLLDLNDNDPTFQNLPFVAEVLEGIP-----AGVSIYQVVAIDLDEGLNGLV 925

Query: 182 SLRGP--YEKM-FSINDSGHISI--VDLSALNTSTIQLVVVATDTGNPPRQASVPAIMH 235
           S R P    +M F IN S  + +   +L     +  QL VVA+D G P + ++    +H
Sbjct: 926 SYRMPVGMPRMDFLINSSSGVVVTTTELDRERIAEYQLRVVASDAGTPTKSSTSTLTIH 984



 Score = 39.7 bits (91), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 55/204 (26%), Positives = 85/204 (41%), Gaps = 16/204 (7%)

Query: 27  ALATLIVSKAGTSLRELQFSKNEYSVSAL---ENLPVNYVLLTVTTNKPRDLRVKYWLSN 83
           A   +++S     +  L F  N +  + L   E+ PV   +  +      +  + + +S 
Sbjct: 12  AWLLVLISGCWGQVNRLPFFTNHFFDTYLLISEDTPVGSSVTQLLAQDMDNDPLVFGVSG 71

Query: 84  DYGERFSISR--QGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPR 141
           +   RF       G + L Q LD ET+  +      +D     +  VNI V +VND  P 
Sbjct: 72  EEASRFFAVEPDTGVVWLRQPLDRETKSEFTVEFSVSDHQGVITRKVNIQVGDVNDNAPT 131

Query: 142 FRYPQYELFLPHIPLADLTP-GSVIGKVEAADGD--KGDRVTLSLRGPYEKMFSINDSGH 198
           F    Y + +P     + TP G+ I  V A D D   G  V  S + P  + F+I+ +  
Sbjct: 132 FHNQPYSVRIP-----ENTPVGTPIFIVNATDPDLGAGGSVLYSFQPP-SQFFAIDSARG 185

Query: 199 ISIV--DLSALNTSTIQLVVVATD 220
           I  V  +L    T   QL V ATD
Sbjct: 186 IVTVIRELDYETTQAYQLTVNATD 209



 Score = 38.9 bits (89), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 34/124 (27%), Positives = 56/124 (45%), Gaps = 21/124 (16%)

Query: 125  SATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLS 182
            +A + ++V++VND  P+F+      ++  I L   TPG+ +  V A D DKG    VT +
Sbjct: 2276 NAKLTVNVLDVNDNTPQFKPFGITYYMERI-LEGATPGTTLIAVAAVDPDKGLNGLVTYT 2334

Query: 183  LRGPYEKMFSINDSGHISIVDLSA-----------LNTSTIQLVVVATDTGNPPRQASVP 231
            L         +   G++ + D SA                +   V A+D G+PPR A +P
Sbjct: 2335 L-------LDLVPPGYVQLEDSSAGKVIANRTVDYEEVHWLNFTVRASDNGSPPRAAEIP 2387

Query: 232  AIMH 235
              + 
Sbjct: 2388 VYLE 2391


>gi|441600764|ref|XP_004087639.1| PREDICTED: protocadherin-15 isoform 3 [Nomascus leucogenys]
          Length = 1681

 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 62/195 (31%), Positives = 100/195 (51%), Gaps = 14/195 (7%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGER-FSISRQ-GDISLMQ 101
           +F +  YS+   E + V  VLL +         V Y + N   +R F++S   G ++L +
Sbjct: 620 RFPQLMYSLEISEAMRVGAVLLNLQATDREGDSVTYAIENGDPQRVFNLSETTGILTLGK 679

Query: 102 CLDYETEDSYRFTVYATDTL--MTTSATVNISVVNVNDWDPRFRYPQYELFLP-HIPLAD 158
            LD E+ D Y   + A+D     T++ATVNI V +VND  P F     + +LP ++ + +
Sbjct: 680 ALDRESTDRYILIITASDGRPGGTSTATVNIVVTDVNDNAPVF-----DPYLPRNLSVVE 734

Query: 159 LTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDSGHI-SIVDLSALNTSTIQLV 215
               + +G+V+A D D G   +V  SL G +  +F I  +G I + V L+       +LV
Sbjct: 735 EEANAFVGQVKATDPDAGINGQVHYSL-GNFNNLFRITSNGSIYTAVKLNREVRDYYELV 793

Query: 216 VVATDTGNPPRQASV 230
           VVATD    PR +++
Sbjct: 794 VVATDGAVHPRHSTL 808



 Score = 55.5 bits (132), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 49/189 (25%), Positives = 86/189 (45%), Gaps = 23/189 (12%)

Query: 6   DFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVN---- 61
           DF Q   LV++A Q +     A A+L +     + +   F+   Y    LE+ PV     
Sbjct: 361 DFHQKFDLVIKAEQDNGHPLPAFASLHIEILDENNQSPYFTMPSYQGYILESAPVGATIS 420

Query: 62  ----------YVLLTVTTNKPRDLRVKYWLSNDYGERFSISRQG---DISLMQCLDYETE 108
                      V L       +D  +  +L NDY   F++++ G    ++L+Q +D E +
Sbjct: 421 DSLNLTSPLRIVALDKDIEDTKDPELHLFL-NDYTSVFTVTQTGITRYLTLLQPVDREEQ 479

Query: 109 DSYRFTVYATDTLMTTSAT-VNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGK 167
            +Y F++ A D +  +    VNI V++ ND  P F    Y++++      D+ PG  + +
Sbjct: 480 QTYTFSITAFDGVQESEPVIVNIQVMDANDNTPTFPEISYDVYV----YTDMRPGDSVIQ 535

Query: 168 VEAADGDKG 176
           + A D D+G
Sbjct: 536 LTAVDADEG 544



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 71/233 (30%), Positives = 103/233 (44%), Gaps = 26/233 (11%)

Query: 13   LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKP 72
            LVV A       R++  TL +           F+ + Y+V   ENLP    +L +   K 
Sbjct: 792  LVVVATDGAVHPRHSTLTLAIKVLDIDDNSPVFTNSTYTVLVEENLPAGTTILQIEA-KD 850

Query: 73   RDL--RVKYWLSNDYGERFSISR--QGDISLMQCLDYET----EDSYRFTVYATD---TL 121
             DL   V Y + +   + F       G++SL++ LDYE     E S  F V A D   T+
Sbjct: 851  VDLGANVSYRIRSPEVKHFFALHPFTGELSLLRSLDYEAFPDQEASITFLVEAFDIYGTM 910

Query: 122  MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDK----GD 177
                ATV + V ++ND+ P F    Y+  +      D   G+ I  V A D D       
Sbjct: 911  PPGIATVTVIVKDMNDYPPVFSKRIYKGMV----APDAVKGTPITTVYAEDADPPGLPAS 966

Query: 178  RVTLSL---RGPY-EKMFSIN-DSGH-ISIVDLSALNTSTIQLVVVATDTGNP 224
            RV   +   + PY   +F +  DSG  I+ V+L+   T+  +LVVVA D G P
Sbjct: 967  RVRYRIDDVQFPYPASIFDVEEDSGRVITRVNLNEEPTTIFKLVVVAFDDGEP 1019



 Score = 46.2 bits (108), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 56/119 (47%), Gaps = 8/119 (6%)

Query: 76  RVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDTLMT---TSATVNISV 132
           +V Y L N +   F I+  G I     L+ E  D Y   V ATD  +    ++ T+ I V
Sbjct: 756 QVHYSLGN-FNNLFRITSNGSIYTAVKLNREVRDYYELVVVATDGAVHPRHSTLTLAIKV 814

Query: 133 VNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMF 191
           ++++D  P F    Y + +      +L  G+ I ++EA D D G  V+  +R P  K F
Sbjct: 815 LDIDDNSPVFTNSTYTVLVEE----NLPAGTTILQIEAKDVDLGANVSYRIRSPEVKHF 869


>gi|167536805|ref|XP_001750073.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163771402|gb|EDQ85069.1| predicted protein [Monosiga brevicollis MX1]
          Length = 10110

 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 64/214 (29%), Positives = 100/214 (46%), Gaps = 36/214 (16%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLR---VKYWL-SNDYGERFSI-SRQGDIS 98
            +F    Y+ S  E+  +N  +  V+   P D+    +KY + + +   RF+I +  G+I 
Sbjct: 5530 EFDSASYTGSVAEDAAINTTVTQVSATNP-DVSADPIKYSIRAGNAAGRFAIDATTGEIR 5588

Query: 99   LMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLAD 158
            + Q LD ET   Y  TV A D++     +V I+V +VND  P F  P Y        +A+
Sbjct: 5589 VAQVLDRETTPGYVLTVRADDSVQLAQTSVTITVTDVNDNSPVFVRPTYS-----TAIAE 5643

Query: 159  LTP-GSVIGKVEAADGDKG--DRVTLSLRG------------PYEKM----FSINDS-GH 198
              P  S + +V A D D G   R++  L G            P++      F+IN S G 
Sbjct: 5644 SAPENSPVLQVSATDADVGLNARLSYELAGSTMLLTATNAVVPFDNASTLPFAINASTGQ 5703

Query: 199  ISIVDLSALNTSTIQ---LVVVATDTGNPPRQAS 229
            I++   +AL+  T+    LV +A D G P R A+
Sbjct: 5704 ITVT--AALDRETVSRYDLVALARDAGTPQRNAT 5735



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 67/233 (28%), Positives = 101/233 (43%), Gaps = 19/233 (8%)

Query: 8   LQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSK-NEYSVSALENLPVNYVLLT 66
           LQ     VR        R A  T+++     +    +F +   Y++S  E+  V   LL 
Sbjct: 296 LQMYNFSVRVTDSGTPSRTATGTVLIHVQDVNDNAPRFGQPAGYAISVPESFNVQQQLLL 355

Query: 67  VTTNK---PRDL--RVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDT- 120
           V+      P  L  +V+Y + N+  +    +  G I      DYE + SY F VYA D  
Sbjct: 356 VSATDADLPSTLNGQVRYAI-NETSDFIIDALSGAIHAAAAFDYEAQQSYTFGVYAHDLG 414

Query: 121 --LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDR 178
               TT  +V I+V +VND  P+F+ P Y + +     +    G+ I  + A D D  D 
Sbjct: 415 SPQRTTRVSVAITVTDVNDNTPQFQAPNYAVSVSEWTAS----GAAIVNLSATDADLHDT 470

Query: 179 VTLSLRGPYEKMFSINDSGHISIVDLSALNTSTIQ---LVVVATDTGNPPRQA 228
           V  SLR          ++G +S+     L+  T Q   L V  +DTG+P R A
Sbjct: 471 VLFSLRTTSVPFGVDQNTGQLSVA--GTLDYETRQSYNLTVRVSDTGSPSRHA 521



 Score = 58.9 bits (141), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 55/203 (27%), Positives = 101/203 (49%), Gaps = 20/203 (9%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVK----YWLSNDYGERFSISRQGDISLM 100
           F K++Y+VS  EN   + ++  + T+       +    +++  + G  F +S  G +SL 
Sbjct: 128 FDKSQYNVSIPENTASSNLVQVIVTDADTTYANQDYTLFFIEGNQGGEFLVSTSGIVSLN 187

Query: 101 QCLDYETEDSYRFTVYATDTL---MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLA 157
             LDYE + +YR  + A +     +  +A +N+ V ++ND  P      Y     ++ ++
Sbjct: 188 YTLDYERQTAYRLLLVAENVAAPPLNDTAWINVLVTDLNDNAPILNPTLY-----NVSVS 242

Query: 158 DLTPG-SVIGKVEAADGDKGDRVTLSLRGPYEKMFSI-NDSGHISIVDLSALNTSTIQLV 215
           + TP  S++  V A D D+ D V+ S+       FSI + SG + +   +AL+  T+Q+ 
Sbjct: 243 EATPANSIVATVVATDADRHDTVSYSIVD-TNIPFSIGSSSGQLRLA--TALDYETLQMY 299

Query: 216 ---VVATDTGNPPRQASVPAIMH 235
              V  TD+G P R A+   ++H
Sbjct: 300 NFSVRVTDSGTPSRTATGTVLIH 322



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 51/153 (33%), Positives = 74/153 (48%), Gaps = 12/153 (7%)

Query: 89   FSISRQ-GDISLMQCLDYETEDSYRFTVYATDTL---MTTSATVNISVVNVNDWDPRFRY 144
            F+I  Q G I+L   +D+ET   YRF V   D+    ++  ATV + + NVND  P FR 
Sbjct: 898  FAIGSQSGVITLANAVDHETVLFYRFNVRVQDSASSPLSALATVTVYITNVNDNAPEFRA 957

Query: 145  PQYELFLPHIPLADLTPGSVIGKVEAADGDK-GDRVTLSLRGPYEKMFSIND-SGHI-SI 201
              Y   +    +A    G+    V+A D D+  + VT +L    +  F IN  +G I + 
Sbjct: 958  DTYSCTIAENSVA----GTFCQTVQADDADRVNNDVTYTLSN-TQGRFRINHLTGRIETT 1012

Query: 202  VDLSALNTSTIQLVVVATDTGNPPRQASVPAIM 234
              L     ++  LV  A D+G PPR   VP I+
Sbjct: 1013 APLDREAQASYSLVATAVDSGIPPRFTDVPVIV 1045



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 54/154 (35%), Positives = 71/154 (46%), Gaps = 20/154 (12%)

Query: 50  YSVSALENLPVNYVLLTV-TTNKPRDLRVKYWLSNDYGERFSI-SRQGDISLMQCLDYET 107
           Y+VS  E  P N ++ TV  T+  R   V Y +  D    FSI S  G + L   LDYET
Sbjct: 237 YNVSVSEATPANSIVATVVATDADRHDTVSYSIV-DTNIPFSIGSSSGQLRLATALDYET 295

Query: 108 EDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYP-------------QYELFL 151
              Y F+V  TD+     T + TV I V +VND  PRF  P             Q +L L
Sbjct: 296 LQMYNFSVRVTDSGTPSRTATGTVLIHVQDVNDNAPRFGQPAGYAISVPESFNVQQQLLL 355

Query: 152 PHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRG 185
                ADL P ++ G+V  A  +  D +  +L G
Sbjct: 356 VSATDADL-PSTLNGQVRYAINETSDFIIDALSG 388



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 62/253 (24%), Positives = 107/253 (42%), Gaps = 32/253 (12%)

Query: 13   LVVRAIQYDNQDRYAL------------ATLIVSKAGTSLRELQFSKNEYSVSALENLPV 60
            +V R + Y+   RY L            ++L+++    +     FS+  Y+ +  E   V
Sbjct: 5066 IVARTLDYELVTRYVLQVHVSDGEYTDSSSLVITVEDVNDNAPVFSRTTYTATFAETQSV 5125

Query: 61   NYVLLTVTTNKPRDLRVK-----YWLSNDYGERFSI-SRQGDISLMQCLDYETEDSYRFT 114
               LLT+  +  RD  ++       +S +   RF + +  G++SL+  LD E   SY   
Sbjct: 5126 GTTLLTLAASD-RDSGIRGMFDFALISGNGDGRFDLNATTGELSLLLPLDRENASSYTLG 5184

Query: 115  VYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAA 171
            V  TD     + ++A V I+V +VND  P+F    + ++L      +   G  +  V A 
Sbjct: 5185 VAVTDRGTPALNSTARVIITVTDVNDNAPQFTAETFSVYLAE----NAQAGDPVFTVTAT 5240

Query: 172  DGDKGDRVTLS---LRGPYEKMFSINDSGHISIVDLSALNTST---IQLVVVATDTGNPP 225
            D D G    LS   L       F+++  G I++   ++ +  T   I L V   D G P 
Sbjct: 5241 DADVGVNAALSFTLLASGDAARFNMSADGSITVAAGASFDRETQESIVLTVRVRDAGVPS 5300

Query: 226  RQASVPAIMHFPE 238
             Q+     +H  +
Sbjct: 5301 LQSETTLTVHLTD 5313



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 47/157 (29%), Positives = 74/157 (47%), Gaps = 24/157 (15%)

Query: 86   GERFSI------SRQGDISLMQCLDYETEDSYRFTVYATDTL----MTTSATVNISVVNV 135
            GE F +       R G ++LMQ +DYE    +  TV ATD       TT AT+ ++V +V
Sbjct: 9321 GEDFVVPPFRLNGRTGAVTLMQAIDYEVSKQHNVTVAATDNSPPRPRTTLATLAVAVTDV 9380

Query: 136  NDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGD-------RVTLSLRGPYE 188
            ND  P F     ++ +      D    + + ++ A D D          R+T  + G  +
Sbjct: 9381 NDNAPIFAQSYADIRIS----VDTPVNTALTRLSATDADSNTVEGGPNARITYHIVG--D 9434

Query: 189  KMFSINDSGHISIV-DLSALNTSTIQLVVVATDTGNP 224
              F+I+D+G I+   + S    ST++ +V ATD G P
Sbjct: 9435 DAFAISDTGLITTASEQSRALRSTVRFIVNATDGGTP 9471



 Score = 51.6 bits (122), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 56/180 (31%), Positives = 85/180 (47%), Gaps = 18/180 (10%)

Query: 56   ENLPVNYVLLTVTTNKP---RDL--RVKYWLSNDYGERFSI-SRQGDISLMQCLDYETED 109
            E LPV  V+ ++    P    D+   + + L+  + E F +    G + L   LD ET+D
Sbjct: 2341 EGLPVGSVVTSIAAYDPDVTTDVAPSLTFALAEPF-EPFEMDGTSGTLLLRSPLDRETQD 2399

Query: 110  SYRFTVYATDTLMTTSAT-VNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKV 168
             Y   V ATD +  TSA  VN++V ++ND  P F      +     P+ D   GS +  +
Sbjct: 2400 RYALNVTATDLVGRTSAVLVNVTVTDLNDNAPVFNESVAWVEFTS-PILD---GSYVTTL 2455

Query: 169  EAADGDKGDRVTLSLRGPYEKMFSIND---SGHISIVDLS-ALNTSTIQLVVVATDTGNP 224
             A+D D G  V   LR    ++    D   +    +V+LS AL+  T  ++V ATD G P
Sbjct: 2456 NASDADIG--VNRQLRFAISRLHDAGDFVVNAESGVVELSRALDVGTYSVIVTATDQGQP 2513



 Score = 51.6 bits (122), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 58/176 (32%), Positives = 84/176 (47%), Gaps = 12/176 (6%)

Query: 51   SVSALENLPVNYVLLTVT-TNKPRDLRVKYWLSNDYGERFSI-SRQGDISLMQCLDYETE 108
            S S  E   V  V+LT T T+   D  V Y L +  G+ FSI +  G I + Q L Y   
Sbjct: 4000 SASISETTSVGTVVLTATATDADCDDVVTYALLSG-GDYFSIQATTGQIRIEQALAYHLH 4058

Query: 109  DSYRFTVYATDTL-MTTSATVNISVVNVNDWDPRFRYPQYEL-FLPHIPLADLTPGSVIG 166
             S+   V ATD L   TS    ++V+NVN   PRF    YE+  L   P+     GS++G
Sbjct: 4059 SSHVVQVQATDLLGRATSKVFTVNVINVNTLPPRFSQGIYEMSILESRPV-----GSLVG 4113

Query: 167  KVEAADGDKGDRVTLSLRGPYEKMFSIN-DSGHISIVD-LSALNTSTIQLVVVATD 220
             + A D D        L G     F+++  SG++++ + + A +  +  LVV  TD
Sbjct: 4114 TLAAEDADSTSLTYTILSGNSGLTFALSATSGNLTLRNTVCARDPGSFVLVVQVTD 4169



 Score = 51.2 bits (121), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 44/146 (30%), Positives = 70/146 (47%), Gaps = 7/146 (4%)

Query: 13   LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVL--LTVTTN 70
            L V A    N DR   ATLI+S    +     F++  +  +  EN  V  V+  L VT  
Sbjct: 1351 LTVVATDSINTDRRGQATLILSVENVNDMAPTFARQTFYFNFSENAIVGAVVGQLDVTDG 1410

Query: 71   KPRDLRVKYW-LSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATD----TLMTTS 125
             P D   +++ LS+D   + +++  G I + Q + YE   S+ FTV A D     L +  
Sbjct: 1411 DPLDGGGRFYVLSDDVPPQLTVTSDGVIKVQQTVKYEVYSSFTFTVRAVDFGANQLSSNL 1470

Query: 126  ATVNISVVNVNDWDPRFRYPQYELFL 151
            +TV +SV++ N + P    P  E ++
Sbjct: 1471 STVIVSVLDENTYAPEILEPSGEGYV 1496



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 38/130 (29%), Positives = 62/130 (47%), Gaps = 17/130 (13%)

Query: 89   FSISRQGDISLMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYP 145
            F+I R G + +   LDYET+  Y  T+ A     +  T+S  V I++ ++ND  P F   
Sbjct: 1851 FAIDRNGQLVVANFLDYETKTFYNLTIIAHGYGPSTATSSMWVAINIQDINDHAPVFDAV 1910

Query: 146  QYELFLPHIPLADLTPGSVIGKVEAADGDKG---DRVTL-------SLRGPYEKMFSIND 195
            Q  +++  +  A    GS+IG+V A D D       VT        +L G    +  ++D
Sbjct: 1911 QVRIYVSELKEA----GSIIGRVRATDKDDAALYGAVTYQLIETFPALTGSARFLLGVDD 1966

Query: 196  SGHISIVDLS 205
            S + + + LS
Sbjct: 1967 SDNAATIQLS 1976



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 47/153 (30%), Positives = 75/153 (49%), Gaps = 9/153 (5%)

Query: 12   TLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPV--NYVLLTVTT 69
            +L+V+A+    Q      TL V+ A  +  ++QFS + Y  +  E+ P+  N V ++ T 
Sbjct: 2089 SLLVQALSSAGQS--VSTTLNVTVAPVTPTDVQFSASNYKATLAESAPLSTNVVTVSATV 2146

Query: 70   NKPRDLRVKYWLSNDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDTL--MTTSA 126
            N      ++Y +    G+RFSI +  G ISL   L+YE    +  TV AT+T       A
Sbjct: 2147 NGASSASMRYAIVGG-GDRFSIGASSGVISLAAALNYEDASFHALTVRATETASGQQALA 2205

Query: 127  TVNISVVNVNDWDPRFRYPQYELFLPHIPLADL 159
            TV ++VVN+ +   RF    Y + +      DL
Sbjct: 2206 TVRVTVVNIVE-SIRFEANVYAVSVSECNHGDL 2237



 Score = 45.8 bits (107), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 60/202 (29%), Positives = 90/202 (44%), Gaps = 26/202 (12%)

Query: 48  NEYSVSALENLPVNYVLLTVTTNKPRDL------RVKYWLSNDYGERFSI-SRQGDISLM 100
           N Y+V+  E++ V   LLT++     DL      +++Y L+      F+I +  G I  +
Sbjct: 543 NGYTVAVAEDVNVANPLLTLSATD-GDLPTTANGQIRYSLNGT--ASFAINATTGVIHAL 599

Query: 101 QCLDYETEDSYRFTVYATD-----TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIP 155
             LDYE    Y FT  A D        TT+ T+N+   NVND  P F    Y + +    
Sbjct: 600 APLDYEQTQKYVFTATAADLGTPPRFATTTVTINVQ--NVNDNVPVFGAASYAVNVSEST 657

Query: 156 LADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSGHISI---VDLSALNTSTI 212
           L +    +VI  V A D D  D V  S++           SG +S+   +D     +  I
Sbjct: 658 LKN----TVILLVSATDADILDSVRFSIQTASVPFAVGQTSGELSLAGTLDYELRTSYNI 713

Query: 213 QLVVVATDTGNPPRQASVPAIM 234
            L V  TDTG+PP  + V  ++
Sbjct: 714 TLRV--TDTGSPPLYSEVQVLI 733



 Score = 45.4 bits (106), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 54/201 (26%), Positives = 90/201 (44%), Gaps = 20/201 (9%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLS-----NDYGERFSISRQGDIS 98
            QF+   +SV   EN      + TVT     D+ V   LS     +    RF++S  G I+
Sbjct: 5214 QFTAETFSVYLAENAQAGDPVFTVTATDA-DVGVNAALSFTLLASGDAARFNMSADGSIT 5272

Query: 99   LMQ--CLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
            +      D ET++S   TV   D     + +  T+ + + +VND  P F      +   +
Sbjct: 5273 VAAGASFDRETQESIVLTVRVRDAGVPSLQSETTLTVHLTDVNDNPPVF-----AVATQN 5327

Query: 154  IPLADLTPGSVIGKVEAADGDKGDR--VTLSLRGPYEKMFSIN-DSGHISIVD-LSALNT 209
            + L++  PG+++    A D D G    +  SL   +   F+IN  SG +S    L     
Sbjct: 5328 VSLSENAPGTLLLTATATDADVGANAGIVYSLENTFSGRFTINASSGALSTTGPLDREAQ 5387

Query: 210  STIQLVVVATDTGNPPRQASV 230
            +  +LVVVA+    P ++A++
Sbjct: 5388 AAYRLVVVASSIMPPLQEATL 5408



 Score = 44.7 bits (104), Expect = 0.076,   Method: Compositional matrix adjust.
 Identities = 44/143 (30%), Positives = 69/143 (48%), Gaps = 14/143 (9%)

Query: 89   FSI-SRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRY 144
            F+I +  G I++   LD ET   Y     A D        +A V ++V +VND  P F  
Sbjct: 5695 FAINASTGQITVTAALDRETVSRYDLVALARDAGTPQRNATALVTVNVRDVNDRAPVFAQ 5754

Query: 145  PQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEK---MFSINDSGHISI 201
              Y L LP   LA   P +++  V A+D D      L+ R  Y +   + ++N +G + +
Sbjct: 5755 AMYTLSLPRETLA---PTALV-NVSASDADLNS--VLTYRAQYTEPAGVLAVNTAGTVRL 5808

Query: 202  VD-LSALNTSTIQLVVVATDTGN 223
             + L AL+  ++ LVV A+D  N
Sbjct: 5809 ANSLCALSAISLVLVVEASDGTN 5831



 Score = 42.7 bits (99), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 56/198 (28%), Positives = 84/198 (42%), Gaps = 16/198 (8%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGERFSISR-QGDISLMQCL 103
           F    Y+V+  E+   N V+L V+      L    +        F++ +  G++SL   L
Sbjct: 644 FGAASYAVNVSESTLKNTVILLVSATDADILDSVRFSIQTASVPFAVGQTSGELSLAGTL 703

Query: 104 DYETEDSYRFTVYATDTL---MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLT 160
           DYE   SY  T+  TDT    + +   V ISV++ ND  PRF    Y+  +    L  + 
Sbjct: 704 DYELRTSYNITLRVTDTGSPPLYSEVQVLISVLDENDNAPRFGAESYQTSV----LESVN 759

Query: 161 PGSVIGKVEAADGDKGDRVTLSLRGP-YEKMFSIN----DSGHISIVDLSALNTSTIQ-- 213
               + +V A DGD        +R   Y  +FS      D+    I    AL+  T+Q  
Sbjct: 760 VTQPLLRVSATDGDLPATANGQVRYELYNALFSDTNFTVDAITGQIYATRALDYETVQRY 819

Query: 214 -LVVVATDTGNPPRQASV 230
              V A D G+P R + V
Sbjct: 820 FFTVQAHDLGSPRRSSPV 837



 Score = 41.2 bits (95), Expect = 0.95,   Method: Compositional matrix adjust.
 Identities = 51/198 (25%), Positives = 84/198 (42%), Gaps = 14/198 (7%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGERFSI-SRQGDISLMQCL 103
            F+    SVS  EN      +          + ++Y L+N     F+I +  G +++   L
Sbjct: 3688 FATASASVSIPENQVAGETIYLAQATDADSVTLRYTLTNSSRSPFAIDAVTGQVAVRGTL 3747

Query: 104  DYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGS 163
               T   +   + A+D +      + ++V +VN + P F    Y      +  +    GS
Sbjct: 3748 CAATTPLHLVEIVASDGVNAGYMQLAVTVTSVNAYPPSFESSVYHFQAYEVQAS----GS 3803

Query: 164  VIGKVEAADGDKGD-RVTLSLRGPYEK--MFSIN-DSGHISI---VDLSALNTSTIQLVV 216
             +G+V A D D GD     S+ G       FSIN D+G I+I   VD +     T  L V
Sbjct: 3804 FVGRVAAQDRDCGDTSFVYSIIGGQTSPATFSINADTGAIAILRPVDYTKQTQHT--LTV 3861

Query: 217  VATDTGNPPRQASVPAIM 234
            +A+D  + PR  +   I+
Sbjct: 3862 MASDGRSVPRTGTAQVIV 3879



 Score = 40.8 bits (94), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 56/197 (28%), Positives = 85/197 (43%), Gaps = 31/197 (15%)

Query: 13   LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALE----NLP-VNYV---- 63
            L VRA +  +  + ALAT+ V+     +  ++F  N Y+VS  E    +LP  N+     
Sbjct: 2190 LTVRATETASGQQ-ALATVRVTVVNI-VESIRFEANVYAVSVSECNHGDLPACNWTAPVL 2247

Query: 64   --------LLTVTTNKPRDLRVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTV 115
                    L+  T N   D R         G+  +++ Q +++     DYE       T+
Sbjct: 2248 RAFDEGNNLVAATFNVIGDTRFVI------GQDATLAYQVELAPGAIFDYEATSVVTTTL 2301

Query: 116  YATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAAD--- 172
             AT   +TTSAT+ I V+NV+D  P F        L  I    L  GSV+  + A D   
Sbjct: 2302 QATSNTLTTSATLQIHVLNVDDLAPVFV--NNASLLEPIVSEGLPVGSVVTSIAAYDPDV 2359

Query: 173  -GDKGDRVTLSLRGPYE 188
              D    +T +L  P+E
Sbjct: 2360 TTDVAPSLTFALAEPFE 2376



 Score = 40.0 bits (92), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 40/145 (27%), Positives = 65/145 (44%), Gaps = 9/145 (6%)

Query: 95   GDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHI 154
            G I + + LDYE    Y   V+ +D   T S+++ I+V +VND  P F    Y       
Sbjct: 5063 GSIIVARTLDYELVTRYVLQVHVSDGEYTDSSSLVITVEDVNDNAPVFSRTTYTATFAET 5122

Query: 155  PLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-DSGHIS-IVDLSALNT 209
                 + G+ +  + A+D D G R       + G  +  F +N  +G +S ++ L   N 
Sbjct: 5123 Q----SVGTTLLTLAASDRDSGIRGMFDFALISGNGDGRFDLNATTGELSLLLPLDRENA 5178

Query: 210  STIQLVVVATDTGNPPRQASVPAIM 234
            S+  L V  TD G P   ++   I+
Sbjct: 5179 SSYTLGVAVTDRGTPALNSTARVII 5203



 Score = 39.3 bits (90), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 37/166 (22%), Positives = 74/166 (44%), Gaps = 14/166 (8%)

Query: 93   RQGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLP 152
            +  ++ L++ +D E   +   T+   D     ++T+ ++V++ ND  P F   ++E    
Sbjct: 3022 QTAELRLIKAVDREVTQTLSATLAVFDGATAIASTLVVTVLDANDNAPAFAQRRFE---- 3077

Query: 153  HIPLADLTPGSVIGKVEAADGDKGDRV----TLSLRGPYEKMFSINDSGHISIVDLSALN 208
               L++  PG+ +  + A D D G       ++S   P       N++G ++   L  L+
Sbjct: 3078 -TDLSEAAPGTNVLSLVATDADAGQNAEIVYSISSGDPNNDFALDNETGLLTTARLICLS 3136

Query: 209  TS--TIQLVVVATDTGNPPRQASVPA---IMHFPEAIVQQASSKLN 249
             +     LVV A D G P ++  V     I+   +A +  A+  +N
Sbjct: 3137 DAIEAYNLVVAAADRGIPSQRTEVAVFIRIVRAADATILYAAKDMN 3182



 Score = 38.5 bits (88), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 48/168 (28%), Positives = 77/168 (45%), Gaps = 16/168 (9%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLS---NDYGERFSISRQGDISLMQ 101
            ++ + Y+ S LEN P+   + TV    P    + Y L+     YG +   +  G +SL +
Sbjct: 4487 WAASAYAASVLENAPLGTTVTTVGAATPDRQALYYSLAAGNEAYGFQVGTT-SGVVSLQR 4545

Query: 102  CLDYETEDSYRFTVYAT---DTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLAD 158
             L    +DSY  T  AT   +T M     V ++VV+ N++ P  R P          L +
Sbjct: 4546 TLCARNQDSYNLTARATVLANTAMFADVAVTVAVVDANEYAPVVRVPA-----AMQELTE 4600

Query: 159  LTP-GSVIGKVEAADGDKGDRVTLSLRGPYE--KMFSIND-SGHISIV 202
             TP GS +  + A D D  D+V   + G       F+I+  SG I+++
Sbjct: 4601 ATPVGSTLLTLTATDADCNDQVRFRIVGGQANPAHFAIDALSGAITLI 4648


>gi|218505745|ref|NP_001136219.1| protocadherin-15 isoform SI-1 precursor [Mus musculus]
 gi|74226398|dbj|BAE23903.1| unnamed protein product [Mus musculus]
 gi|85725323|gb|ABC79279.1| protocadherin-15-secreted isoform 1 [Mus musculus]
          Length = 1176

 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 61/195 (31%), Positives = 99/195 (50%), Gaps = 14/195 (7%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGER-FSISRQ-GDISLMQ 101
           +F +  YS+   E + +  +LL +         + Y + N   +R F++S   G +SL +
Sbjct: 620 RFPQLMYSLEVSEAMRIGAILLNLQATDREGDPITYAIENGDPQRVFNLSETTGILSLGK 679

Query: 102 CLDYETEDSYRFTVYATDTL--MTTSATVNISVVNVNDWDPRFRYPQYELFLP-HIPLAD 158
            LD E+ D Y   V A+D     T++ATVNI V +VND  P F     + +LP ++ + +
Sbjct: 680 ALDRESTDRYILIVTASDGRPDGTSTATVNIVVTDVNDNAPVF-----DPYLPRNLSVVE 734

Query: 159 LTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDSGHI-SIVDLSALNTSTIQLV 215
               + +G+V A D D G   +V  SL G +  +F I  +G I + V L+       +LV
Sbjct: 735 EEANAFVGQVRATDPDAGINGQVHYSL-GNFNNLFRITSNGSIYTAVKLNREARDHYELV 793

Query: 216 VVATDTGNPPRQASV 230
           VVATD    PR +++
Sbjct: 794 VVATDGAVHPRHSTL 808



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 65/245 (26%), Positives = 110/245 (44%), Gaps = 35/245 (14%)

Query: 6   DFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVL- 64
           DF Q   LV++A Q +     A A+L +     + +   F+   Y    LE+ PV   + 
Sbjct: 361 DFHQKFDLVIKAEQDNGHPLPAFASLHIEILDENNQSPYFTMPSYQGYILESAPVGATIS 420

Query: 65  --LTVTT-----------NKPRDLRVKYWLSNDYGERFSISRQG---DISLMQCLDYETE 108
             L +TT              +D  +  +L NDY   F+++  G    ++L+Q +D E +
Sbjct: 421 ESLNLTTPLRIVALDKDIEDTKDPELHLFL-NDYTSVFTVTPTGITRYLTLLQPVDREEQ 479

Query: 109 DSYRFTVYATDTLMTTS-ATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGK 167
            +Y F + A D +  +    VNI V++ ND  P F    Y++++      D++PG  + +
Sbjct: 480 QTYTFLITAFDGVQESEPVVVNIRVMDANDNTPTFPEISYDVYV----YTDMSPGDSVIQ 535

Query: 168 VEAADGDKGDRVTLSLRGPYEKM------FSIND-SGHISIV-DLSALNTSTIQLVVVAT 219
           + A D D+G    +S    YE +      F IN  +G +SI   +  +   T  L V A+
Sbjct: 536 LTAVDADEGSNGEIS----YEILVGGKGDFVINKTTGLVSIAPGVELIVGQTYALTVQAS 591

Query: 220 DTGNP 224
           D   P
Sbjct: 592 DNAPP 596



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 71/233 (30%), Positives = 104/233 (44%), Gaps = 26/233 (11%)

Query: 13   LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKP 72
            LVV A       R++  TL +           F+ + Y+V   ENLP     L +   K 
Sbjct: 792  LVVVATDGAVHPRHSTLTLYIKVLDIDDNSPVFTNSTYTVVVEENLPAGTSFLQIEA-KD 850

Query: 73   RDL--RVKYWL-SNDYGERFSISR-QGDISLMQCLDYET----EDSYRFTVYATD---TL 121
             DL   V Y + S +    F++    G++SL++ LDYE     E S  F V A D   T+
Sbjct: 851  VDLGANVSYRIRSPEVKHLFALHPFTGELSLLRSLDYEAFPDQEASITFLVEAFDIYGTM 910

Query: 122  MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDK----GD 177
                ATV + V ++ND+ P F    Y+  +      D   G+ I  V A D D       
Sbjct: 911  PPGIATVTVIVKDMNDYPPVFSKRIYKGMV----APDAVKGTPITTVYAEDADPPGMPAS 966

Query: 178  RVTL---SLRGPY-EKMFSIN-DSGHI-SIVDLSALNTSTIQLVVVATDTGNP 224
            RV      ++ PY   +F +  DSG + + V+L+   T+  +LVVVA D G P
Sbjct: 967  RVRYRVDDVQFPYPASIFDVEEDSGRVVTRVNLNEEPTTIFKLVVVAFDDGEP 1019


>gi|14625439|dbj|BAB61902.1| KIAA1774 protein [Homo sapiens]
          Length = 1147

 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 59/195 (30%), Positives = 90/195 (46%), Gaps = 20/195 (10%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWLSNDYGERFSIS-RQGDISLM 100
           F +  Y  +  E++PV  ++LTVT           ++Y L  D   +F+I+   GDI ++
Sbjct: 230 FDQPSYQEAVFEDVPVGTIILTVTATDADSGNFALIEYSLG-DGESKFAINPTTGDIYVL 288

Query: 101 QCLDYETEDSYRFTVYATDT-------LMTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
             LD E +D Y  T  A D            S  V I V++VND  P+F  PQ+   +  
Sbjct: 289 SSLDREKKDHYILTALAKDNPGDVASNRRENSVQVVIQVLDVNDCRPQFSKPQFSTSV-- 346

Query: 154 IPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIN-DSGHISIVDLSALNTS 210
               +   G+ +  + A D D+G    +T SL GP  + F ++ DSG ++       +  
Sbjct: 347 --YENEPAGTSVITMMATDQDEGPNGELTYSLEGPGVEAFHVDMDSGLVT-TQRPLQSYE 403

Query: 211 TIQLVVVATDTGNPP 225
              L VVATD G PP
Sbjct: 404 KFSLTVVATDGGEPP 418



 Score = 39.3 bits (90), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 32/107 (29%), Positives = 49/107 (45%), Gaps = 8/107 (7%)

Query: 92  SRQGDISLMQCLDYETEDSYRFTVYATDTLMTTSAT---VNISVVNVNDWDPRFRYPQYE 148
           S  G +   + +DYE      FTV A+D      A    V + +V++ND +P F  P Y+
Sbjct: 177 SSAGKVIANRTVDYEEVHWLNFTVRASDNGSPPRAAEIPVYLEIVDINDNNPIFDQPSYQ 236

Query: 149 LFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSIN 194
             +      D+  G++I  V A D D G+   +    G  E  F+IN
Sbjct: 237 EAV----FEDVPVGTIILTVTATDADSGNFALIEYSLGDGESKFAIN 279



 Score = 38.9 bits (89), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 34/124 (27%), Positives = 56/124 (45%), Gaps = 21/124 (16%)

Query: 125 SATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLS 182
           +A + ++V++VND  P+F+      ++  I L   TPG+ +  V A D DKG    VT +
Sbjct: 104 NAKLTVNVLDVNDNTPQFKPFGITYYMERI-LEGATPGTTLIAVAAVDPDKGLNGLVTYT 162

Query: 183 LRGPYEKMFSINDSGHISIVDLSA-----------LNTSTIQLVVVATDTGNPPRQASVP 231
           L         +   G++ + D SA                +   V A+D G+PPR A +P
Sbjct: 163 L-------LDLVPPGYVQLEDSSAGKVIANRTVDYEEVHWLNFTVRASDNGSPPRAAEIP 215

Query: 232 AIMH 235
             + 
Sbjct: 216 VYLE 219


>gi|347543893|gb|AEP02519.1| PCDH15, partial [Myotis altarium]
          Length = 1916

 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 61/195 (31%), Positives = 99/195 (50%), Gaps = 14/195 (7%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGER-FSISRQ-GDISLMQ 101
           +F +  YS+   E + +  VLL +         + Y + N   +R F++S   G ++L +
Sbjct: 608 RFPQMMYSLEVSEAMRIGAVLLNLQATDREGDPITYAIENGDPQRVFNLSETTGILTLGK 667

Query: 102 CLDYETEDSYRFTVYATDTL--MTTSATVNISVVNVNDWDPRFRYPQYELFLP-HIPLAD 158
            LD E+ D Y   V A D     T++ATVNI V +VND DP F     + +LP ++ + +
Sbjct: 668 ALDRESTDRYILIVTAHDGRPDGTSTATVNIVVSDVNDNDPVF-----DPYLPRNLSVVE 722

Query: 159 LTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDSGHI-SIVDLSALNTSTIQLV 215
               + +G+V A D D G   +V  SL G +  +F I  +G I + V L+       +L+
Sbjct: 723 EEANAFVGQVRATDPDAGINGQVYYSL-GNFNHLFRITSNGSIYTTVKLNREVRDYYELL 781

Query: 216 VVATDTGNPPRQASV 230
           VVATD    PR +++
Sbjct: 782 VVATDGAVHPRHSTL 796



 Score = 57.8 bits (138), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 66/245 (26%), Positives = 109/245 (44%), Gaps = 35/245 (14%)

Query: 6   DFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVN---- 61
           DF Q   LV++A Q +     A A+L +     + +   F+   Y    LE+ PV     
Sbjct: 349 DFHQKFDLVIKAEQDNGHPLPAFASLHIEILDENNQSPYFTMPSYQGYILESAPVGSTIS 408

Query: 62  ----------YVLLTVTTNKPRDLRVKYWLSNDYGERFSISRQGD---ISLMQCLDYETE 108
                      V+L       +D  +  +L NDY   F+I+  G    ++L+Q +D E +
Sbjct: 409 DSVNLTTPLRIVVLDKDIEDTKDPELHLFL-NDYTSVFTITPTGITRFLTLLQPVDREEQ 467

Query: 109 DSYRFTVYATDTLMTTS-ATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGK 167
           D+Y F++ A D +  +    VNI V++ ND  P F    Y +++      D++PG  + +
Sbjct: 468 DTYIFSMTAFDGVQESQPVVVNIRVMDANDNTPTFPEISYNVYV----YTDMSPGDSVIQ 523

Query: 168 VEAADGDKGDRVTLSLRGPYEKM------FSIN-DSGHISIV-DLSALNTSTIQLVVVAT 219
           + A D D+G    +S    YE +      F IN ++G I+I   +  +   T  L V A 
Sbjct: 524 LTAVDADEGSNGEIS----YEILIGDQGDFIINKETGLITIAPGVELIVGRTYALTVQAA 579

Query: 220 DTGNP 224
           D   P
Sbjct: 580 DNAPP 584



 Score = 54.3 bits (129), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 65/200 (32%), Positives = 95/200 (47%), Gaps = 24/200 (12%)

Query: 45   FSKNEYSVSALENLPVNYVLLTV-TTNKPRDLRVKYWL-SNDYGERFSISR-QGDISLMQ 101
            F+ + Y+V   ENLP   + L V  T+      V Y + S +    F++    G++SL++
Sbjct: 812  FTNSTYTVVVEENLPAGTIFLQVEATDVDLGANVSYRIRSPEVKHLFAMHPFTGELSLLR 871

Query: 102  CLDYET----EDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHI 154
             LDYE+    E S  F V A D   T+    ATV + V ++ND+ P F    Y+     I
Sbjct: 872  SLDYESFPDQEASITFLVEAFDIYGTMPPGIATVTVIVKDMNDYPPVFSKRIYK----GI 927

Query: 155  PLADLTPGSVIGKVEAADGDK----GDRVTLSLRG---PY-EKMFSIN-DSGH-ISIVDL 204
               D   G+ I  V A D D       RV   + G   PY   +F +  DSG  I+ V+L
Sbjct: 928  VAPDAAKGTPITSVYAEDADPPGLPASRVRYRVDGVQSPYPASIFDVEEDSGTVITRVNL 987

Query: 205  SALNTSTIQLVVVATDTGNP 224
            +   T+  +LVV+A D G P
Sbjct: 988  NEEPTTIFKLVVIAFDDGEP 1007



 Score = 43.9 bits (102), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 38/132 (28%), Positives = 66/132 (50%), Gaps = 10/132 (7%)

Query: 76  RVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDTLMT---TSATVNISV 132
           +V Y L N +   F I+  G I     L+ E  D Y   V ATD  +    ++ T+ I V
Sbjct: 744 QVYYSLGN-FNHLFRITSNGSIYTTVKLNREVRDYYELLVVATDGAVHPRHSTLTLAIKV 802

Query: 133 VNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEK-MF 191
           ++++D  P F    Y + +      +L  G++  +VEA D D G  V+  +R P  K +F
Sbjct: 803 LDIDDNSPVFTNSTYTVVVEE----NLPAGTIFLQVEATDVDLGANVSYRIRSPEVKHLF 858

Query: 192 SIND-SGHISIV 202
           +++  +G +S++
Sbjct: 859 AMHPFTGELSLL 870


>gi|332820511|ref|XP_003310590.1| PREDICTED: protocadherin-23-like [Pan troglodytes]
          Length = 879

 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 79/302 (26%), Positives = 130/302 (43%), Gaps = 35/302 (11%)

Query: 11  ITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVN--------- 61
            TL V+A   + +  ++ A + V+    +    QF  + +S    ENLP++         
Sbjct: 244 FTLTVQASDAEKK-HFSFAVVFVNVLDDNDHAPQFMFSSFSCIVPENLPISSTICSINAL 302

Query: 62  ------YVLLTVTTNKPRDLRVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTV 115
                 Y  LT +   P    + + +S D+         GDI   Q LDYE  + Y  TV
Sbjct: 303 DFDAGPYGELTYSIVSP--CFLTHGMSYDHDLFLIDPLTGDIHAKQILDYENGNKYCLTV 360

Query: 116 YATDTL-MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGD 174
            A D    T S  V + +  +++++P F   QY   LP           +IG+VEA+D D
Sbjct: 361 QAKDKGDATASLVVWVDIEGIDEFEPIFTQDQYFFTLPE----KNKDRQLIGRVEASDAD 416

Query: 175 KG-DRVTLSLRGPYEKMFSINDS-GHISIVDL-----SALNTS-TIQLVVVATDTGNPPR 226
            G D V L   G     FS+N + G+I ++       S LN   T+++ ++A    +P  
Sbjct: 417 AGIDGVILYSLGTSSPFFSVNKTNGNIYLIRALPLIKSQLNKEDTMEMKIIA---HSPKS 473

Query: 227 QASVPAIMHFPEAIVQQASSKLNSGTSSTVLIILGVVLIVLGFVIILLILYI-HKNKHTK 285
            +   +   F         + L   TSS  + ++   L+ L  + IL+++ + HK K T 
Sbjct: 474 DSKFASCTVFVNVSFSSEGTPLAVFTSSFSISLVVSFLVFLILICILIVMILRHKQKDTI 533

Query: 286 NN 287
           NN
Sbjct: 534 NN 535



 Score = 40.8 bits (94), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 39/148 (26%), Positives = 67/148 (45%), Gaps = 19/148 (12%)

Query: 56  ENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTV 115
           EN  V Y +  ++ N   +  V+   +N +   +   + G + L+  LD E   S+   +
Sbjct: 89  ENTYVEYSI--ISGNSQNNFHVE---TNFFHSEYPYKQVGYLVLLHSLDREASASHELVI 143

Query: 116 YATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTP-GSVIGKVEAA 171
            A+D+    ++++A ++I V++VND  P F    Y     H  + + TP GS I  V A 
Sbjct: 144 LASDSGCPPLSSTAVISIQVLDVNDNPPNFSSLSY-----HTHVKESTPLGSHITVVSAN 198

Query: 172 DGDKGDRVTLSLRGPYEKMFSINDSGHI 199
           D D G    +        + S N+ GH 
Sbjct: 199 DRDTGSHAEIIYN-----IISGNEKGHF 221



 Score = 38.1 bits (87), Expect = 6.6,   Method: Compositional matrix adjust.
 Identities = 40/152 (26%), Positives = 66/152 (43%), Gaps = 15/152 (9%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRD----LRVKYWL--SNDYGERFSISRQGDIS 98
           FS   Y     E+ P+   +  V+ N  RD      + Y +   N+ G  +     G + 
Sbjct: 173 FSSLSYHTHVKESTPLGSHITVVSAND-RDTGSHAEIIYNIISGNEKGHFYLEENTGVLY 231

Query: 99  LMQCLDYETEDSYRFTVYATDTLMT--TSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
           L++ LDYE    +  TV A+D      + A V ++V++ ND  P+F +  +   +P    
Sbjct: 232 LIKPLDYEEMTKFTLTVQASDAEKKHFSFAVVFVNVLDDNDHAPQFMFSSFSCIVPE--- 288

Query: 157 ADLTPGSVIGKVEAADGDKG--DRVTLSLRGP 186
            +L   S I  + A D D G    +T S+  P
Sbjct: 289 -NLPISSTICSINALDFDAGPYGELTYSIVSP 319


>gi|119625349|gb|EAX04944.1| dachsous 2 (Drosophila), isoform CRA_c [Homo sapiens]
          Length = 2776

 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 78/301 (25%), Positives = 132/301 (43%), Gaps = 33/301 (10%)

Query: 11   ITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVN--------- 61
             TL V+A   + +  ++ A + VS    +    QF  + +S    ENLP++         
Sbjct: 2141 FTLTVQASDAEKK-HFSFAVVFVSVLDDNDHAPQFMFSSFSCIVPENLPISSTICSINAL 2199

Query: 62   ------YVLLTVTTNKPRDLRVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTV 115
                  Y  LT +   P    + + +S D+         GDI   Q LDYE  + Y  TV
Sbjct: 2200 DFDAGPYGELTYSIVSP--CFLTHGMSYDHDLFLIDPLTGDIHAKQILDYENGNKYCLTV 2257

Query: 116  YATDTL-MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGD 174
             A D    T S  V + +  +++++P F   QY   LP           +IG+VEA+D D
Sbjct: 2258 QAKDKGDATASLVVWVDIEGIDEFEPIFTQDQYFFTLPE----KNKDRQLIGRVEASDAD 2313

Query: 175  KG-DRVTLSLRGPYEKMFSINDS-GHISIVDL-----SALNTS-TIQLVVVATDTGNPPR 226
             G D V L   G     FS+N + G+I ++       S LN   T+++ ++A    +  +
Sbjct: 2314 AGIDGVILYSLGTSSPFFSVNKTNGNIYLIRALPLIKSQLNKEDTLEMKIIAHSPKSDSK 2373

Query: 227  QASVPAIMHFPEAIVQQASSKLNSGTSSTVLIILGVVLIVLGFVIILLILYIHKNKHTKN 286
             AS    ++   +      +   S  S ++++   V LI++  +I++++   HK K T N
Sbjct: 2374 FASCTVFVNVSFSSEGTPLAVFASSFSISLVVSFLVFLILICILIVMILR--HKQKDTIN 2431

Query: 287  N 287
            N
Sbjct: 2432 N 2432



 Score = 51.2 bits (121), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 55/201 (27%), Positives = 93/201 (46%), Gaps = 14/201 (6%)

Query: 38  TSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLR--VKYWLSN-DYGERFSIS-R 93
           T+L   +F + +Y+    E++P +  + TV   +P +    + Y +S+ D G +FSI  R
Sbjct: 274 TTLAPAEFERPKYTFLVYEDVPEDSPIGTVKAREPLNSSEPIFYRISSGDLGGKFSIHPR 333

Query: 94  QGDISLMQCLDYETEDSYRFTVYAT--DTLMTTSATVNISVVNVNDWDPRFRYPQYELFL 151
            G I   + LD+ET+     TV A        +S  VNI+V++VND  P F     E+ +
Sbjct: 334 LGTIRTRKPLDHETQPVVVLTVQAQLGSAPACSSTEVNITVMDVNDNHPAFLRTSDEIRI 393

Query: 152 PHIPLADLTPGSVIGKVEAADGDKGDR--VTLSLRGPYEKMFSINDSGHISIVD--LSAL 207
                    PG+ +    A D D G    +  S+  P   +F+I+ +  +  ++  L A 
Sbjct: 394 SQT----TPPGTALYLARAEDRDSGRNGLIRYSIASPQPGVFAIDRALGVLFLNGSLGAG 449

Query: 208 NTSTIQLVVVATDTGNPPRQA 228
               + L + A D G  P+ A
Sbjct: 450 EQRELTLTLRAEDQGVHPQAA 470



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 57/209 (27%), Positives = 95/209 (45%), Gaps = 30/209 (14%)

Query: 56   ENLPVNYVLLTVTTNKP---RDLRVKY-WLSNDYGERFSISRQGDISLMQC-LDYETEDS 110
            E++ V  ++  +T + P   R+ +V Y  LS +    F +     +    C LDYE +  
Sbjct: 1035 EDVTVGSLVHHITAHDPDEGRNGKVTYSILSGNENMTFMLDESSGLLTTTCPLDYEMKTQ 1094

Query: 111  YRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGK 167
            +  TV A D     +++S T+ ++V++VND  P F+   YE  +      +  PG  + +
Sbjct: 1095 HILTVLALDDGTPALSSSQTLTVTVLDVNDEAPVFKQHLYEASVKE----NQNPGEFVTR 1150

Query: 168  VEAADGDKGDRVTLSLR---GPYEKMFSIN-DSGHI---SIVDLSALNTSTIQLVVVATD 220
            VEA D D G    L      G   ++F IN D+G +   +I+D       T++++V    
Sbjct: 1151 VEALDRDSGVNSKLQFEIMPGASFELFEINSDTGEVVTTTILDREIQEVFTLRVLV---R 1207

Query: 221  TGNPPRQASVPAIM--------HFPEAIV 241
             G  P  +S   I+        H PE IV
Sbjct: 1208 DGGFPSLSSTTTILCTVEDENDHAPEFIV 1236



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 46/144 (31%), Positives = 66/144 (45%), Gaps = 13/144 (9%)

Query: 95  GDISLMQCLDYETEDSYRFTVYA----TDTLMTTSATVNISVVNVNDWDPRFRYPQYELF 150
           G I L +  DYE+  +Y F V+A       L   S TV + V + ND  P F +    L 
Sbjct: 545 GWIYLRRQFDYESTQTYNFRVFAWIPEDGFLQNVSTTVIVRVWDENDNSPTFLHDVLFLK 604

Query: 151 LPHIPLADLTPGSVIGKVEAADGDKGDRVTLSL----RGPYEKMFSINDSGHISIVDLSA 206
           +   P+    P  VIGK+ A D D G    L       G + KM + N    I+ V L  
Sbjct: 605 VEESPV----PQGVIGKITAIDMDSGKNGQLLYFLLSDGKFFKM-NPNTGELINWVALDR 659

Query: 207 LNTSTIQLVVVATDTGNPPRQASV 230
            +    ++ V+ TD G+PPR A++
Sbjct: 660 EHRGHHEMTVLVTDRGSPPRNATM 683



 Score = 45.4 bits (106), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 43/148 (29%), Positives = 77/148 (52%), Gaps = 11/148 (7%)

Query: 86   GERFSISRQ-GDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRY 144
            G +F+I +  G + L++ LD+E    Y   +  +D++  T   + + V++VND  P F  
Sbjct: 1795 GTKFAIDQNTGVVVLVKTLDFEEMTEYELLIQISDSVHYTEGALVVRVLDVNDNPPVFSQ 1854

Query: 145  PQYELFLPH-IPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSIN-DSGHI-SI 201
              Y++ +P  IP+     G  +  + A D +  + ++  +     K FSI+  +G I +I
Sbjct: 1855 DFYQVTVPESIPV-----GYSVLTLSATDLESNENISYRILSS-SKEFSIDPKNGTIFTI 1908

Query: 202  VDLSALNT-STIQLVVVATDTGNPPRQA 228
              +  L+T ST Q +V A+D GNP  +A
Sbjct: 1909 SPVLLLDTISTTQFLVEASDGGNPDLRA 1936



 Score = 41.6 bits (96), Expect = 0.63,   Method: Compositional matrix adjust.
 Identities = 53/198 (26%), Positives = 86/198 (43%), Gaps = 16/198 (8%)

Query: 50   YSVSALENLPVNYVLLTVTT-NKPRDL--RVKYWLSNDYGERFSIS-RQGDISLMQCLDY 105
            Y  S  E+  V  V+L ++  +K   L  + +Y+L+++    F+I    G +     LD 
Sbjct: 1343 YQSSVREDAEVGTVVLVLSAVDKDEGLNGQTEYFLTDEASGAFTIDPMSGTLKTSNTLDR 1402

Query: 106  ETEDSYRFTVYATDTLM----TTSATVNISVVNVNDWDPRFRYPQYELFL-PHIPLADLT 160
            E    + F+  A D  +    +T+  + + V +VND DP      +++FL P  P    T
Sbjct: 1403 EARSQHTFSAVARDCSIQGSRSTTVIIKVYVTDVNDNDPVLEQNPFDVFLSPESPTNQTT 1462

Query: 161  PGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSIND-SGHISIVDLSALNTSTIQLVVVA 218
               VI  V A D D G   T+       + MFSI+  +G I      +     I L +  
Sbjct: 1463 ---VI--VRADDLDLGPNGTVVFSFAETQSMFSIDKYTGEIQFQQNPSSEYFPIWLQLKV 1517

Query: 219  TDTGNPPRQASVPAIMHF 236
            TD G P R  +   ++H 
Sbjct: 1518 TDQGIPARTTTGLLVIHM 1535



 Score = 41.2 bits (95), Expect = 0.83,   Method: Compositional matrix adjust.
 Identities = 48/199 (24%), Positives = 87/199 (43%), Gaps = 18/199 (9%)

Query: 45   FSKNEYSVSALENL-PVNYVLLTVTTNKPRDLRVKYWLSNDYGERFSI----SRQGDISL 99
            F ++ Y  S  EN  P  +V      ++   +  K       G  F +    S  G++  
Sbjct: 1129 FKQHLYEASVKENQNPGEFVTRVEALDRDSGVNSKLQFEIMPGASFELFEINSDTGEVVT 1188

Query: 100  MQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
               LD E ++ +   V   D     ++++ T+  +V + ND  P F    Y++ +    L
Sbjct: 1189 TTILDREIQEVFTLRVLVRDGGFPSLSSTTTILCTVEDENDHAPEFIVSSYDIEV----L 1244

Query: 157  ADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIND-SGHISIVD-LSALNTST 211
             +  P  V+  V A+D D G+   +    + G  ++ F+IN+ SG +S    L     S 
Sbjct: 1245 ENQEP-EVVYTVLASDMDAGNNRAVEYHIIDGNTDECFTINEMSGELSTTRALDREQISN 1303

Query: 212  IQLVVVATDTGNPPRQASV 230
              LV++ +D G+PPR + +
Sbjct: 1304 FTLVILCSDLGDPPRSSVI 1322



 Score = 41.2 bits (95), Expect = 0.97,   Method: Compositional matrix adjust.
 Identities = 38/148 (25%), Positives = 66/148 (44%), Gaps = 19/148 (12%)

Query: 56   ENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTV 115
            EN  V Y +++  +     +  K++ S      +   + G + L+  LD E   S+   +
Sbjct: 1986 ENTYVEYSIISGNSQNNFHVETKFFHS-----EYPYKQVGYLVLLHSLDREASASHELVI 2040

Query: 116  YATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTP-GSVIGKVEAA 171
             A+D+    ++++A ++I V++VND  P F    Y     H  + + TP GS I  V A 
Sbjct: 2041 LASDSGCPPLSSTAVISIQVLDVNDNPPNFSSLSY-----HTHVKESTPLGSHITVVSAN 2095

Query: 172  DGDKGDRVTLSLRGPYEKMFSINDSGHI 199
            D D G    +        + S N+ GH 
Sbjct: 2096 DRDTGSHAEI-----IYNIISGNEKGHF 2118



 Score = 39.7 bits (91), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 38/140 (27%), Positives = 61/140 (43%), Gaps = 13/140 (9%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRD----LRVKYWL--SNDYGERFSISRQGDIS 98
            FS   Y     E+ P+   +  V+ N  RD      + Y +   N+ G  +     G + 
Sbjct: 2070 FSSLSYHTHVKESTPLGSHITVVSAND-RDTGSHAEIIYNIISGNEKGHFYLEENTGVLY 2128

Query: 99   LMQCLDYETEDSYRFTVYATDTLMT--TSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
            L++ LDYE    +  TV A+D      + A V +SV++ ND  P+F +  +   +P    
Sbjct: 2129 LIKPLDYEKMTKFTLTVQASDAEKKHFSFAVVFVSVLDDNDHAPQFMFSSFSCIVPE--- 2185

Query: 157  ADLTPGSVIGKVEAADGDKG 176
             +L   S I  + A D D G
Sbjct: 2186 -NLPISSTICSINALDFDAG 2204



 Score = 38.5 bits (88), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 59/132 (44%), Gaps = 12/132 (9%)

Query: 49  EYSVSALENLPVNYVLLTVTTNKP---RDLRVKYWLSN-DYGERFSI-SRQGDISLMQCL 103
           E  V  LE  PVN ++ TV    P    +  V Y +S+ D  + F I +  G+I     L
Sbjct: 707 ELHVKVLEGQPVNMLVTTVFAKDPDEGNNAEVTYSVSSEDSSDHFKIDANSGEIRTTTIL 766

Query: 104 DYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLT 160
            Y+   SYR +V ATD     +   A VNI V+ ++            L +P     +L 
Sbjct: 767 SYDYRPSYRMSVIATDQGVPPLQGQAVVNIQVIPLSKGRAIMSQNIRHLIIPE----NLK 822

Query: 161 PGSVIGKVEAAD 172
           P  ++  ++++D
Sbjct: 823 PTKIMSLIKSSD 834


>gi|85725333|gb|ABC79284.1| protocadherin-15-CD3 isoform 1 [Gallus gallus]
          Length = 1710

 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 67/246 (27%), Positives = 118/246 (47%), Gaps = 27/246 (10%)

Query: 6   DFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVL- 64
           D  Q   LV++A Q +     A A L +     + ++  F+K+ Y    LE+ PV   + 
Sbjct: 356 DLHQKFDLVIKAEQDNGHPLPAFANLHIEVLDENNQKPYFTKSTYEGFILESSPVGTTIS 415

Query: 65  ----------LTVTTN---KPRDLRVKYWLSNDYGERFSISRQG---DISLMQCLDYETE 108
                     +TV  N   + +D ++  +L NDY   F++++ G    ++L+Q +D E +
Sbjct: 416 DSRNLTSPLQITVLDNDVEETKDPQLHLFL-NDYNTFFTVTQSGITRYLTLLQPVDREAQ 474

Query: 109 DSYRFTVYATDTLM-TTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGK 167
             Y F++ A+D +  +T  TVNI V++ ND  P F    Y + +      D+ PG  + K
Sbjct: 475 QLYTFSMIASDGVQESTPVTVNIVVIDANDNSPTFSNISYNVKI----YTDMGPGEGVIK 530

Query: 168 VEAADGDKG--DRVTLSLRGPYEKMFSIND-SGHISIVDLSALNTS-TIQLVVVATDTGN 223
           + A D D+G   ++   +    +  F IND +G I+I     L+   +  L V A+D+  
Sbjct: 531 LTAVDADEGPNGQIVYEILAGDQGDFIINDRTGLIAIAPGVVLSVGRSYALTVKASDSAP 590

Query: 224 PPRQAS 229
           P ++ S
Sbjct: 591 PAQRRS 596



 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 58/195 (29%), Positives = 101/195 (51%), Gaps = 14/195 (7%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSN-DYGERFSISRQ-GDISLMQ 101
           +F +  YS+   E +    +LL +         ++Y + N D  + F++S+  G ++L +
Sbjct: 615 RFPQLMYSLEVSEAMRTGAILLNLQAFDREGDPIRYLIENGDPQQVFNLSQSSGLLALGK 674

Query: 102 CLDYETEDSYRFTVYATDTL--MTTSATVNISVVNVNDWDPRFRYPQYELFLP-HIPLAD 158
            LD E+ D Y   V A+D     T++ATVNI V +VND  P F     ++FLP ++ + +
Sbjct: 675 PLDRESTDRYILIVTASDGRPDGTSTATVNIVVTDVNDNGPVF-----DMFLPKNLSVQE 729

Query: 159 LTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDSGHI-SIVDLSALNTSTIQLV 215
               + +G+V A D D G   +V  SL   ++ +F I  +G I + V L+       +L+
Sbjct: 730 EEANAFVGQVRATDPDAGVNGQVHYSLAN-FKNLFRITSNGSIYTAVKLNREVRDYYELI 788

Query: 216 VVATDTGNPPRQASV 230
           V ATD    PR++++
Sbjct: 789 VEATDGAVDPRRSTL 803



 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 63/201 (31%), Positives = 100/201 (49%), Gaps = 26/201 (12%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDL--RVKYWL-SNDYGERFSISR-QGDISLM 100
            F+   YSV   ENLP   V L +   K  DL   V Y + + +  E F++++  G++SL+
Sbjct: 819  FTNASYSVLVPENLPPGTVFLQIEA-KDVDLGSNVTYRIRTQEALEYFALNKYTGELSLL 877

Query: 101  QCLDYE----TEDSYRFTVYATDTLMTTS---ATVNISVVNVNDWDPRFRYPQYELFLPH 153
            + LDYE    T+ ++ F V A D+  T     ATV + V ++ND+ P F    Y   +  
Sbjct: 878  KSLDYESFSDTDATFTFLVEAFDSKGTMPPGLATVTVRVKDMNDYSPVFSKTLYRGMV-- 935

Query: 154  IPLADLTPGSVIGKVEAAD----GDKGDRVTLS---LRGPYE-KMFSIND-SGH-ISIVD 203
                D   G+VI  V A D    G    RV      ++ PY   +F + + SG  ++ V+
Sbjct: 936  --APDAVKGTVITTVSAEDQDPPGTPASRVRYKVDVVQFPYSASIFDVEENSGRVVTRVN 993

Query: 204  LSALNTSTIQLVVVATDTGNP 224
            L+   ++  +LVV+A D G+P
Sbjct: 994  LNEEPSTVFKLVVIAYDDGDP 1014



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 40/132 (30%), Positives = 67/132 (50%), Gaps = 10/132 (7%)

Query: 76  RVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDTLM---TTSATVNISV 132
           +V Y L+N +   F I+  G I     L+ E  D Y   V ATD  +    ++ T+ I V
Sbjct: 751 QVHYSLAN-FKNLFRITSNGSIYTAVKLNREVRDYYELIVEATDGAVDPRRSTLTLAIKV 809

Query: 133 VNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYE-KMF 191
           ++++D  P F    Y + +P     +L PG+V  ++EA D D G  VT  +R     + F
Sbjct: 810 LDIDDNSPVFTNASYSVLVPE----NLPPGTVFLQIEAKDVDLGSNVTYRIRTQEALEYF 865

Query: 192 SIND-SGHISIV 202
           ++N  +G +S++
Sbjct: 866 ALNKYTGELSLL 877


>gi|332834336|ref|XP_003312664.1| PREDICTED: cadherin-23-like isoform 2 [Pan troglodytes]
          Length = 1079

 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 59/195 (30%), Positives = 90/195 (46%), Gaps = 20/195 (10%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWLSNDYGERFSIS-RQGDISLM 100
           F +  Y  +  E++PV  ++LTVT           ++Y L  D   +F+I+   GDI ++
Sbjct: 162 FDQPSYQEAVFEDVPVGTIILTVTATDADSGNFALIEYSLG-DGESKFAINPTTGDIYVL 220

Query: 101 QCLDYETEDSYRFTVYATDT-------LMTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
             LD E +D Y  T  A D            S  V I V++VND  P+F  PQ+   +  
Sbjct: 221 SSLDREKKDHYILTALAKDNPGDVASNRRENSVQVVIQVLDVNDCRPQFSKPQFSTSV-- 278

Query: 154 IPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIN-DSGHISIVDLSALNTS 210
               +   G+ +  + A D D+G    +T SL GP  + F ++ DSG ++       +  
Sbjct: 279 --YENEPAGTSVITMMATDQDEGPNGELTYSLEGPGVEAFHVDMDSGLVT-TQRPLQSYE 335

Query: 211 TIQLVVVATDTGNPP 225
              L VVATD G PP
Sbjct: 336 RFNLTVVATDGGEPP 350



 Score = 39.7 bits (91), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 32/107 (29%), Positives = 49/107 (45%), Gaps = 8/107 (7%)

Query: 92  SRQGDISLMQCLDYETEDSYRFTVYATDTLMTTSAT---VNISVVNVNDWDPRFRYPQYE 148
           S  G +   + +DYE      FTV A+D      A    V + +V++ND +P F  P Y+
Sbjct: 109 SSAGKVIANRTVDYEEVHWLNFTVRASDNGSPPRAAEIPVYLEIVDINDNNPIFDQPSYQ 168

Query: 149 LFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSIN 194
             +      D+  G++I  V A D D G+   +    G  E  F+IN
Sbjct: 169 EAV----FEDVPVGTIILTVTATDADSGNFALIEYSLGDGESKFAIN 211



 Score = 39.3 bits (90), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 57/209 (27%), Positives = 85/209 (40%), Gaps = 34/209 (16%)

Query: 41  RELQFSKNEYSVSALE-----NLPVNYVLLTVTTNKPRDLRVKYWLSNDYGERFSISR-Q 94
            E+    N Y V A +     N  V Y  L    N  RD     W      E F+I    
Sbjct: 384 EEIPLRSNVYEVYATDKDEGLNGAVRYSFLKTAGN--RD-----W------EFFTIDPIS 430

Query: 95  GDISLMQCLDYETEDSYRFTVYATD----TLMTTSATVNISVVNVNDWDPRF-----RYP 145
           G I   Q LD E++  Y   + A+D        T   + +++ +++D +P F       P
Sbjct: 431 GLIQTAQRLDRESQAVYSLILVASDLGQPVPYETMQPLQVALEDIDDNEPLFVRPPKGSP 490

Query: 146 QYELF-LP-HIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSGHISIV- 202
           QY+L  +P H P   L  G+V G V+A +G           G  EK F +   GH+ ++ 
Sbjct: 491 QYQLLTVPEHSPRGTLV-GNVTGAVDADEGPNAIVYYFIAAGNEEKNFHLQPDGHLLVLR 549

Query: 203 DLSALNTSTIQLVVVATD--TGNPPRQAS 229
           DL     +    +V A+   +  PPR  S
Sbjct: 550 DLDREREAIFSFIVKASSNRSWTPPRGPS 578



 Score = 38.9 bits (89), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 34/124 (27%), Positives = 56/124 (45%), Gaps = 21/124 (16%)

Query: 125 SATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLS 182
           +A + ++V++VND  P+F+      ++  I L   TPG+ +  V A D DKG    VT +
Sbjct: 36  NAKLTVNVLDVNDNTPQFKPFGITYYMERI-LEGATPGTTLIAVAAVDPDKGLNGLVTYT 94

Query: 183 LRGPYEKMFSINDSGHISIVDLSA-----------LNTSTIQLVVVATDTGNPPRQASVP 231
           L         +   G++ + D SA                +   V A+D G+PPR A +P
Sbjct: 95  L-------LDLVPPGYVQLEDSSAGKVIANRTVDYEEVHWLNFTVRASDNGSPPRAAEIP 147

Query: 232 AIMH 235
             + 
Sbjct: 148 VYLE 151


>gi|12060937|gb|AAG48303.1|AF312024_1 cadherin related 23 [Homo sapiens]
 gi|18077851|gb|AAG27034.2| cadherin 23 [Homo sapiens]
          Length = 3354

 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 59/195 (30%), Positives = 90/195 (46%), Gaps = 20/195 (10%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWLSNDYGERFSIS-RQGDISLM 100
            F +  Y  +  E++PV  ++LTVT           ++Y L  D   +F+I+   GDI ++
Sbjct: 2402 FDQPSYQEAVFEDVPVGTIILTVTATDADSGNFALIEYSLG-DGESKFAINPTTGDIYVL 2460

Query: 101  QCLDYETEDSYRFTVYATDT-------LMTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
              LD E +D Y  T  A D            S  V I V++VND  P+F  PQ+   +  
Sbjct: 2461 SSLDREKKDHYILTALAKDNPGDVASNRRENSVQVVIQVLDVNDCRPQFSKPQFSTSV-- 2518

Query: 154  IPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIN-DSGHISIVDLSALNTS 210
                +   G+ +  + A D D+G    +T SL GP  + F ++ DSG ++       +  
Sbjct: 2519 --YENEPAGTSVITMMATDQDEGPNGELTYSLEGPGVEAFHVDMDSGLVT-TQRPLQSYE 2575

Query: 211  TIQLVVVATDTGNPP 225
               L VVATD G PP
Sbjct: 2576 KFSLTVVATDGGEPP 2590



 Score = 54.3 bits (129), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 63/210 (30%), Positives = 99/210 (47%), Gaps = 28/210 (13%)

Query: 45  FSKNEYSVSALENLPVNYVLLTV--TTNKPRDL-RVKYWLSNDYGERFSISRQ-GDISLM 100
           FS+  Y++S  EN+ V   +LTV  T N       V Y+ S+D  +RFS+ +  G I L+
Sbjct: 460 FSQPLYNISLYENVTVGTSVLTVLATDNDAGTFGEVSYFFSDD-PDRFSLDKDTGLIMLI 518

Query: 101 QCLDYETEDSYRFTVYATDTL-MTTSATVNISVVNVNDWDPRFRYPQYELFL----PHIP 155
             LDYE    +  T+ A D     T+  V I+V++VND  P F+   Y   L    P + 
Sbjct: 519 ARLDYELIQRFTLTIIARDGGGEETTGRVRINVLDVNDNVPTFQKDAYVGALRENEPSV- 577

Query: 156 LADLTPGSVIGKVEAADGDK--GDRVTLSL-----RGPYEKMFSINDSGHISI---VDLS 205
                  + + ++ A D D    +++T S+      G Y  +      G IS+   +D  
Sbjct: 578 -------TQLVRLRATDEDSPPNNQITYSIVSASAFGSYFDISLYEGYGVISVSRPLDYE 630

Query: 206 ALNTSTIQLVVVATDTGNPPRQASVPAIMH 235
            ++   I L V+A D GNPP  ++VP  + 
Sbjct: 631 QISNGLIYLTVMAMDAGNPPLNSTVPVTIE 660



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 68/218 (31%), Positives = 102/218 (46%), Gaps = 44/218 (20%)

Query: 45  FSKNEYSVSALENLPVNY-VLLTVTTNKPRDLRVKYWLSNDYGE-----------RFSI- 91
           FSK  Y VS +EN+     VL    T+  R        S +YG+           +F I 
Sbjct: 671 FSKPAYFVSVVENIMAGATVLFLNATDLDR--------SREYGQESIIYSLEGSTQFRIN 722

Query: 92  SRQGDISLMQCLDYETEDSYRFTVYATD-----TLMTTSATVNISVVNVNDWDPRFRYPQ 146
           +R G+I+    LD ET+  Y   V A D        T  ATVNI+++++ND  P ++   
Sbjct: 723 ARSGEITTTSLLDRETKSEYILIVRAVDGGVGHNQKTGIATVNITLLDINDNHPTWKDAP 782

Query: 147 YELFLPHIPLADLT-PGSVIGKVEAADGDKGDRVTL--SLRGPYEKMFSIND-SGHI--- 199
           Y     +I L ++T P S +  V A D D G+  TL  S++ P  K +S+N  +G I   
Sbjct: 783 Y-----YINLVEMTPPDSDVTTVVAVDPDLGENGTLVYSIQPP-NKFYSLNSTTGKIRTT 836

Query: 200 -SIVDLSALNTSTIQL----VVVATDTGNPPRQASVPA 232
            +++D    +    +L    VV  TD G PP +A+  A
Sbjct: 837 HAMLDRENPDPHEAELMRKIVVSVTDCGRPPLKATSSA 874



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 62/204 (30%), Positives = 90/204 (44%), Gaps = 25/204 (12%)

Query: 43   LQFSKNEYSVSALENLPVNYVLLTVTTNKPRDL-----RVKYWLSNDYGERFSISR-QGD 96
            +QFS   Y  + LENL +   ++ V      +L     R   + S      F I    G 
Sbjct: 1311 VQFSNASYEAAILENLALGTEIVRVQAYSIDNLNQITYRFDAYTSTQAKALFKIDAITGV 1370

Query: 97   ISLMQCLDYETEDSYRFTVYATDTLMTTSATVN--ISVVNVNDWDPRFRYPQYELFLPHI 154
            I++   +D E  D Y  TV A D      +TV   I+V++ ND  PRF +         I
Sbjct: 1371 ITVQGLVDREKGDFYTLTVVADDGGPKVDSTVKVYITVLDENDNSPRFDFTSDSAV--SI 1428

Query: 155  PLADLTPGSVIGKVEAADGDKGD--RVTLSLR-----GPYEKMFSINDS-GHISI---VD 203
            P  D   G  +  V+A D D G   +V  SL      G +E + + NDS G + +   +D
Sbjct: 1429 P-EDCPVGQRVATVKAWDPDAGSNGQVVFSLASGNIAGAFE-IVTTNDSIGEVFVARPLD 1486

Query: 204  LSALNTSTIQLVVVATDTGNPPRQ 227
               L+   +Q  VVA+D G PPR+
Sbjct: 1487 REELDHYILQ--VVASDRGTPPRK 1508



 Score = 45.8 bits (107), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 57/215 (26%), Positives = 95/215 (44%), Gaps = 36/215 (16%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVT-TNKPRDL--RVKYWLSNDYGERFSIS------RQG 95
            FS    +V  LEN P  + +L VT T++   L   + Y +     +RF I       R G
Sbjct: 2069 FSPATLTVHLLENCPPGFSVLQVTATDEDSGLNGELVYRIEAGAQDRFLIHLVTGVIRVG 2128

Query: 96   DISLMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLP 152
            + ++    D E ++SYR TV ATD     ++ +A V I + ++ND  P F  P   + + 
Sbjct: 2129 NATI----DREEQESYRLTVVATDRGTVPLSGTAIVTILIDDINDSRPEFLNPIQTVSV- 2183

Query: 153  HIPLADLTPGSVIGKVEAADGDKGDRVTLSLRG------------PYEKMFSIN-DSGHI 199
               L    PG+VI  + A D D   ++   + G              E  F++N ++G +
Sbjct: 2184 ---LESAEPGTVIANITAIDHDLNPKLEYHIVGIVAKDDTDRLVPNQEDAFAVNINTGSV 2240

Query: 200  SI---VDLSALNTSTIQLVVVATDTGNPPRQASVP 231
             +   ++   + T  + L V+   +  P R  SVP
Sbjct: 2241 MVKSPMNRELVATYEVTLSVIDNASDLPERSVSVP 2275



 Score = 44.3 bits (103), Expect = 0.095,   Method: Compositional matrix adjust.
 Identities = 53/199 (26%), Positives = 90/199 (45%), Gaps = 26/199 (13%)

Query: 44  QFSKNEYSVSALENLPVNYVL--LTVTTNKPRDLRV----KYWLSNDYGERF-----SIS 92
           +F+ +EYSV+  E   V + L       +K  +L +    + +L  +    F     S+ 
Sbjct: 347 EFNSSEYSVAITELAQVGFALPLFIQVVDKDENLGLNSMFEVYLVGNNSHHFIISPTSVQ 406

Query: 93  RQGDISLMQC--LDYETEDSYRFTVYATDTL--MTTSATVNISVVNVNDWDPRFRYPQYE 148
            + DI +     LDYET D Y F ++A +++      A V I+++N ND  P F  P Y 
Sbjct: 407 GKADIRIRVAIPLDYETVDRYDFDLFANESVPDHVGYAKVKITLINENDNRPIFSQPLYN 466

Query: 149 LFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDSGHISIVDLSA 206
           + L      ++T G+ +  V A D D G    V+       ++     D+G I ++  + 
Sbjct: 467 ISL----YENVTVGTSVLTVLATDNDAGTFGEVSYFFSDDPDRFSLDKDTGLIMLI--AR 520

Query: 207 LNTSTIQ---LVVVATDTG 222
           L+   IQ   L ++A D G
Sbjct: 521 LDYELIQRFTLTIIARDGG 539



 Score = 44.3 bits (103), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 62/235 (26%), Positives = 106/235 (45%), Gaps = 45/235 (19%)

Query: 65   LTVTTNKPRDLRVKYWLS---NDYG---------------ERFSIS-RQGDISLMQCLDY 105
            ++V+ + PR+ RV  WL+   ND G                +FS+  R   +  +  LD 
Sbjct: 1002 VSVSEDVPREFRV-VWLNCTDNDVGLNAELSYFITGGNVDGKFSVGYRDAVVRTVVGLDR 1060

Query: 106  ETEDSYRFTVYATDT-----LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLT 160
            ET  +Y   + A D        T +ATV ++V++VND  P F    YE  +P     D+ 
Sbjct: 1061 ETTAAYMLILEAIDNGPVGKRHTGTATVFVTVLDVNDNRPIFLQSSYEASVPE----DIP 1116

Query: 161  PGSVIGKVEAADGDKGD--RVTLS-LRGPYEKMFSINDSGHISIVDLSALN---TSTIQL 214
             G  I +++A D D+G+  RV    L G +   F I+ S  + +     L+    S+  L
Sbjct: 1117 EGHSILQLKATDADEGEFGRVWYRILHGNHGNNFRIHVSNGLLMRGPRPLDRERNSSHVL 1176

Query: 215  VVVATDTGNPPRQASVPAIMHFPE------AIVQQASSKLN----SGTSSTVLII 259
            +V A +    P ++SV  I++  +         QQ  S+L     +G  ++V+++
Sbjct: 1177 IVEAYNHDLGPMRSSVRVIVYVEDINDEAPVFTQQQYSRLGLRETAGIGTSVIVV 1231



 Score = 39.7 bits (91), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 55/204 (26%), Positives = 85/204 (41%), Gaps = 16/204 (7%)

Query: 27  ALATLIVSKAGTSLRELQFSKNEYSVSAL---ENLPVNYVLLTVTTNKPRDLRVKYWLSN 83
           A   +++S     +  L F  N +  + L   E+ PV   +  +      +  + + +S 
Sbjct: 12  AWLLVLISGCWGQVNRLPFFTNHFFDTYLLISEDTPVGSSVTQLLAQDMDNDPLVFGVSG 71

Query: 84  DYGERFSISR--QGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPR 141
           +   RF       G + L Q LD ET+  +      +D     +  VNI V +VND  P 
Sbjct: 72  EEASRFFAVEPDTGVVWLRQPLDRETKSEFTVEFSVSDHQGVITRKVNIQVGDVNDNAPT 131

Query: 142 FRYPQYELFLPHIPLADLTP-GSVIGKVEAADGD--KGDRVTLSLRGPYEKMFSINDSGH 198
           F    Y + +P     + TP G+ I  V A D D   G  V  S + P  + F+I+ +  
Sbjct: 132 FHNQPYSVRIP-----ENTPVGTPIFIVNATDPDLGAGGSVLYSFQPP-SQFFAIDSARG 185

Query: 199 ISIV--DLSALNTSTIQLVVVATD 220
           I  V  +L    T   QL V ATD
Sbjct: 186 IVTVIRELDYETTQAYQLTVNATD 209



 Score = 39.7 bits (91), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 39/119 (32%), Positives = 60/119 (50%), Gaps = 11/119 (9%)

Query: 123 TTSATVNISVVNVNDWDPRFR-YPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTL 181
           T+SATV ++++++ND DP F+  P     L  IP      G  I +V A D D+G    +
Sbjct: 871 TSSATVFVNLLDLNDNDPTFQNLPFVAEVLEGIP-----AGVSIYQVVAIDLDEGLNGLV 925

Query: 182 SLRGP--YEKM-FSINDSGHISI--VDLSALNTSTIQLVVVATDTGNPPRQASVPAIMH 235
           S R P    +M F IN S  + +   +L     +  QL VVA+D G P + ++    +H
Sbjct: 926 SYRMPVGMPRMDFLINSSSGVVVTTTELDRERIAEYQLRVVASDAGTPTKSSTSTLTIH 984



 Score = 39.7 bits (91), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 32/107 (29%), Positives = 49/107 (45%), Gaps = 8/107 (7%)

Query: 92   SRQGDISLMQCLDYETEDSYRFTVYATDTLMTTSAT---VNISVVNVNDWDPRFRYPQYE 148
            S  G +   + +DYE      FTV A+D      A    V + +V++ND +P F  P Y+
Sbjct: 2349 SSAGKVIANRTVDYEEVHWLNFTVRASDNGSPPRAAEIPVYLEIVDINDNNPIFDQPSYQ 2408

Query: 149  LFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSIN 194
              +      D+  G++I  V A D D G+   +    G  E  F+IN
Sbjct: 2409 EAV----FEDVPVGTIILTVTATDADSGNFALIEYSLGDGESKFAIN 2451



 Score = 38.9 bits (89), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 33/119 (27%), Positives = 55/119 (46%), Gaps = 11/119 (9%)

Query: 125  SATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG-----DRV 179
            +A + ++V++VND  P+F+      ++  I L   TPG+ +  V A D DKG        
Sbjct: 2276 NAKLTVNVLDVNDNTPQFKPFGITYYMERI-LEGATPGTTLIAVAAVDPDKGLNGLVTYT 2334

Query: 180  TLSLRGPYEKMFSINDSGHI---SIVDLSALNTSTIQLVVVATDTGNPPRQASVPAIMH 235
             L L  P       + +G +     VD   ++   +   V A+D G+PPR A +P  + 
Sbjct: 2335 LLDLVPPGYVQLEDSSAGKVIANRTVDYEEVHW--LNFTVRASDNGSPPRAAEIPVYLE 2391


>gi|47059046|ref|NP_060109.2| protocadherin-23 isoform 1 [Homo sapiens]
 gi|74762378|sp|Q6V1P9.1|PCD23_HUMAN RecName: Full=Protocadherin-23; AltName: Full=Cadherin-27; AltName:
            Full=Cadherin-like protein CDHJ; AltName:
            Full=Cadherin-like protein VR8; AltName: Full=Protein
            dachsous homolog 2; AltName: Full=Protocadherin PCDHJ
 gi|38049487|gb|AAR10443.1| cadherin protein [Homo sapiens]
          Length = 2916

 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 78/301 (25%), Positives = 132/301 (43%), Gaps = 33/301 (10%)

Query: 11   ITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVN--------- 61
             TL V+A   + +  ++ A + VS    +    QF  + +S    ENLP++         
Sbjct: 2281 FTLTVQASDAEKK-HFSFAVVFVSVLDDNDHAPQFMFSSFSCIVPENLPISSTICSINAL 2339

Query: 62   ------YVLLTVTTNKPRDLRVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTV 115
                  Y  LT +   P    + + +S D+         GDI   Q LDYE  + Y  TV
Sbjct: 2340 DFDAGPYGELTYSIVSP--CFLTHGMSYDHDLFLIDPLTGDIHAKQILDYENGNKYCLTV 2397

Query: 116  YATDTL-MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGD 174
             A D    T S  V + +  +++++P F   QY   LP           +IG+VEA+D D
Sbjct: 2398 QAKDKGDATASLVVWVDIEGIDEFEPIFTQDQYFFTLPE----KNKDRQLIGRVEASDAD 2453

Query: 175  KG-DRVTLSLRGPYEKMFSINDS-GHISIVDL-----SALNTS-TIQLVVVATDTGNPPR 226
             G D V L   G     FS+N + G+I ++       S LN   T+++ ++A    +  +
Sbjct: 2454 AGIDGVILYSLGTSSPFFSVNKTNGNIYLIRALPLIKSQLNKEDTLEMKIIAHSPKSDSK 2513

Query: 227  QASVPAIMHFPEAIVQQASSKLNSGTSSTVLIILGVVLIVLGFVIILLILYIHKNKHTKN 286
             AS    ++   +      +   S  S ++++   V LI++  +I++++   HK K T N
Sbjct: 2514 FASCTVFVNVSFSSEGTPLAVFASSFSISLVVSFLVFLILICILIVMILR--HKQKDTIN 2571

Query: 287  N 287
            N
Sbjct: 2572 N 2572



 Score = 51.2 bits (121), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 55/201 (27%), Positives = 93/201 (46%), Gaps = 14/201 (6%)

Query: 38  TSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLR--VKYWLSN-DYGERFSIS-R 93
           T+L   +F + +Y+    E++P +  + TV   +P +    + Y +S+ D G +FSI  R
Sbjct: 370 TTLAPAEFERPKYTFLVYEDVPEDSPIGTVKAREPLNSSEPIFYRISSGDLGGKFSIHPR 429

Query: 94  QGDISLMQCLDYETEDSYRFTVYAT--DTLMTTSATVNISVVNVNDWDPRFRYPQYELFL 151
            G I   + LD+ET+     TV A        +S  VNI+V++VND  P F     E+ +
Sbjct: 430 LGTIRTRKPLDHETQPVVVLTVQAQLGSAPACSSTEVNITVMDVNDNHPAFLRTSDEIRI 489

Query: 152 PHIPLADLTPGSVIGKVEAADGDKGDR--VTLSLRGPYEKMFSINDSGHISIVD--LSAL 207
                    PG+ +    A D D G    +  S+  P   +F+I+ +  +  ++  L A 
Sbjct: 490 SQT----TPPGTALYLARAEDRDSGRNGLIRYSIASPQPGVFAIDRALGVLFLNGSLGAG 545

Query: 208 NTSTIQLVVVATDTGNPPRQA 228
               + L + A D G  P+ A
Sbjct: 546 EQRELTLTLRAEDQGVHPQAA 566



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 57/209 (27%), Positives = 95/209 (45%), Gaps = 30/209 (14%)

Query: 56   ENLPVNYVLLTVTTNKP---RDLRVKY-WLSNDYGERFSISRQGDISLMQC-LDYETEDS 110
            E++ V  ++  +T + P   R+ +V Y  LS +    F +     +    C LDYE +  
Sbjct: 1175 EDVTVGSLVHHITAHDPDEGRNGKVTYSILSGNENMTFMLDESSGLLTTTCPLDYEMKTQ 1234

Query: 111  YRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGK 167
            +  TV A D     +++S T+ ++V++VND  P F+   YE  +      +  PG  + +
Sbjct: 1235 HILTVLALDDGTPALSSSQTLTVTVLDVNDEAPVFKQHLYEASVKE----NQNPGEFVTR 1290

Query: 168  VEAADGDKGDRVTLSLR---GPYEKMFSIN-DSGHI---SIVDLSALNTSTIQLVVVATD 220
            VEA D D G    L      G   ++F IN D+G +   +I+D       T++++V    
Sbjct: 1291 VEALDRDSGVNSKLQFEIMPGASFELFEINSDTGEVVTTTILDREIQEVFTLRVLV---R 1347

Query: 221  TGNPPRQASVPAIM--------HFPEAIV 241
             G  P  +S   I+        H PE IV
Sbjct: 1348 DGGFPSLSSTTTILCTVEDENDHAPEFIV 1376



 Score = 45.4 bits (106), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 43/148 (29%), Positives = 77/148 (52%), Gaps = 11/148 (7%)

Query: 86   GERFSISRQ-GDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRY 144
            G +F+I +  G + L++ LD+E    Y   +  +D++  T   + + V++VND  P F  
Sbjct: 1935 GTKFAIDQNTGVVVLVKTLDFEEMTEYELLIQISDSVHYTEGALVVRVLDVNDNPPVFSQ 1994

Query: 145  PQYELFLPH-IPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSIN-DSGHI-SI 201
              Y++ +P  IP+     G  +  + A D +  + ++  +     K FSI+  +G I +I
Sbjct: 1995 DFYQVTVPESIPV-----GYSVLTLSATDLESNENISYRILSS-SKEFSIDPKNGTIFTI 2048

Query: 202  VDLSALNT-STIQLVVVATDTGNPPRQA 228
              +  L+T ST Q +V A+D GNP  +A
Sbjct: 2049 SPVLLLDTISTTQFLVEASDGGNPDLRA 2076



 Score = 41.6 bits (96), Expect = 0.63,   Method: Compositional matrix adjust.
 Identities = 53/198 (26%), Positives = 86/198 (43%), Gaps = 16/198 (8%)

Query: 50   YSVSALENLPVNYVLLTVTT-NKPRDL--RVKYWLSNDYGERFSIS-RQGDISLMQCLDY 105
            Y  S  E+  V  V+L ++  +K   L  + +Y+L+++    F+I    G +     LD 
Sbjct: 1483 YQSSVREDAEVGTVVLVLSAVDKDEGLNGQTEYFLTDEASGAFTIDPMSGTLKTSNTLDR 1542

Query: 106  ETEDSYRFTVYATDTLM----TTSATVNISVVNVNDWDPRFRYPQYELFL-PHIPLADLT 160
            E    + F+  A D  +    +T+  + + V +VND DP      +++FL P  P    T
Sbjct: 1543 EARSQHTFSAVARDCSIQGSRSTTVIIKVYVTDVNDNDPVLEQNPFDVFLSPESPTNQTT 1602

Query: 161  PGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSIND-SGHISIVDLSALNTSTIQLVVVA 218
               VI  V A D D G   T+       + MFSI+  +G I      +     I L +  
Sbjct: 1603 ---VI--VRADDLDLGPNGTVVFSFAETQSMFSIDKYTGEIQFQQNPSSEYFPIWLQLKV 1657

Query: 219  TDTGNPPRQASVPAIMHF 236
            TD G P R  +   ++H 
Sbjct: 1658 TDQGIPARTTTGLLVIHM 1675



 Score = 41.2 bits (95), Expect = 0.91,   Method: Compositional matrix adjust.
 Identities = 48/199 (24%), Positives = 87/199 (43%), Gaps = 18/199 (9%)

Query: 45   FSKNEYSVSALENL-PVNYVLLTVTTNKPRDLRVKYWLSNDYGERFSI----SRQGDISL 99
            F ++ Y  S  EN  P  +V      ++   +  K       G  F +    S  G++  
Sbjct: 1269 FKQHLYEASVKENQNPGEFVTRVEALDRDSGVNSKLQFEIMPGASFELFEINSDTGEVVT 1328

Query: 100  MQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
               LD E ++ +   V   D     ++++ T+  +V + ND  P F    Y++ +    L
Sbjct: 1329 TTILDREIQEVFTLRVLVRDGGFPSLSSTTTILCTVEDENDHAPEFIVSSYDIEV----L 1384

Query: 157  ADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIND-SGHISIVD-LSALNTST 211
             +  P  V+  V A+D D G+   +    + G  ++ F+IN+ SG +S    L     S 
Sbjct: 1385 ENQEP-EVVYTVLASDMDAGNNRAVEYHIIDGNTDECFTINEMSGELSTTRALDREQISN 1443

Query: 212  IQLVVVATDTGNPPRQASV 230
              LV++ +D G+PPR + +
Sbjct: 1444 FTLVILCSDLGDPPRSSVI 1462



 Score = 40.8 bits (94), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 38/148 (25%), Positives = 66/148 (44%), Gaps = 19/148 (12%)

Query: 56   ENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTV 115
            EN  V Y +++  +     +  K++ S      +   + G + L+  LD E   S+   +
Sbjct: 2126 ENTYVEYSIISGNSQNNFHVETKFFHS-----EYPYKQVGYLVLLHSLDREASASHELVI 2180

Query: 116  YATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTP-GSVIGKVEAA 171
             A+D+    ++++A ++I V++VND  P F    Y     H  + + TP GS I  V A 
Sbjct: 2181 LASDSGCPPLSSTAVISIQVLDVNDNPPNFSSLSY-----HTHVKESTPLGSHITVVSAN 2235

Query: 172  DGDKGDRVTLSLRGPYEKMFSINDSGHI 199
            D D G    +        + S N+ GH 
Sbjct: 2236 DRDTGSHAEIIY-----NIISGNEKGHF 2258



 Score = 39.3 bits (90), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 38/140 (27%), Positives = 61/140 (43%), Gaps = 13/140 (9%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRD----LRVKYWL--SNDYGERFSISRQGDIS 98
            FS   Y     E+ P+   +  V+ N  RD      + Y +   N+ G  +     G + 
Sbjct: 2210 FSSLSYHTHVKESTPLGSHITVVSAND-RDTGSHAEIIYNIISGNEKGHFYLEENTGVLY 2268

Query: 99   LMQCLDYETEDSYRFTVYATDTLMT--TSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
            L++ LDYE    +  TV A+D      + A V +SV++ ND  P+F +  +   +P    
Sbjct: 2269 LIKPLDYEKMTKFTLTVQASDAEKKHFSFAVVFVSVLDDNDHAPQFMFSSFSCIVPE--- 2325

Query: 157  ADLTPGSVIGKVEAADGDKG 176
             +L   S I  + A D D G
Sbjct: 2326 -NLPISSTICSINALDFDAG 2344



 Score = 39.3 bits (90), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 30/86 (34%), Positives = 40/86 (46%), Gaps = 8/86 (9%)

Query: 95  GDISLMQCLDYETEDSYRFTVYA----TDTLMTTSATVNISVVNVNDWDPRFRYPQYELF 150
           G I L +  DYE+  +Y F V+A       L   S TV + V + ND  P F +    L 
Sbjct: 641 GWIYLRRQFDYESTQTYNFRVFAWIPEDGFLQNVSTTVIVRVWDENDNSPTFLHDVLFLK 700

Query: 151 LPHIPLADLTPGSVIGKVEAADGDKG 176
           +   P+    P  VIGK+ A D D G
Sbjct: 701 VEESPV----PQGVIGKITAIDMDSG 722



 Score = 38.5 bits (88), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 32/93 (34%), Positives = 44/93 (47%), Gaps = 8/93 (8%)

Query: 49  EYSVSALENLPVNYVLLTVTTNKP---RDLRVKYWLSN-DYGERFSI-SRQGDISLMQCL 103
           E  V  LE  PVN ++ TV    P    +  V Y +S+ D  + F I +  G+I     L
Sbjct: 847 ELHVKVLEGQPVNMLVTTVFAKDPDEGNNAEVTYSVSSEDSSDHFKIDANNGEIRTTTIL 906

Query: 104 DYETEDSYRFTVYATDT---LMTTSATVNISVV 133
            Y+   SYR +V ATD     +   A VNI V+
Sbjct: 907 SYDYRPSYRMSVIATDQGVPPLQGQAVVNIQVI 939


>gi|119625348|gb|EAX04943.1| dachsous 2 (Drosophila), isoform CRA_b [Homo sapiens]
 gi|119625350|gb|EAX04945.1| dachsous 2 (Drosophila), isoform CRA_b [Homo sapiens]
          Length = 2527

 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 78/301 (25%), Positives = 132/301 (43%), Gaps = 33/301 (10%)

Query: 11   ITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVN--------- 61
             TL V+A   + +  ++ A + VS    +    QF  + +S    ENLP++         
Sbjct: 1892 FTLTVQASDAEKK-HFSFAVVFVSVLDDNDHAPQFMFSSFSCIVPENLPISSTICSINAL 1950

Query: 62   ------YVLLTVTTNKPRDLRVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTV 115
                  Y  LT +   P    + + +S D+         GDI   Q LDYE  + Y  TV
Sbjct: 1951 DFDAGPYGELTYSIVSP--CFLTHGMSYDHDLFLIDPLTGDIHAKQILDYENGNKYCLTV 2008

Query: 116  YATDTL-MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGD 174
             A D    T S  V + +  +++++P F   QY   LP           +IG+VEA+D D
Sbjct: 2009 QAKDKGDATASLVVWVDIEGIDEFEPIFTQDQYFFTLPE----KNKDRQLIGRVEASDAD 2064

Query: 175  KG-DRVTLSLRGPYEKMFSINDS-GHISIVDL-----SALNTS-TIQLVVVATDTGNPPR 226
             G D V L   G     FS+N + G+I ++       S LN   T+++ ++A    +  +
Sbjct: 2065 AGIDGVILYSLGTSSPFFSVNKTNGNIYLIRALPLIKSQLNKEDTLEMKIIAHSPKSDSK 2124

Query: 227  QASVPAIMHFPEAIVQQASSKLNSGTSSTVLIILGVVLIVLGFVIILLILYIHKNKHTKN 286
             AS    ++   +      +   S  S ++++   V LI++  +I++++   HK K T N
Sbjct: 2125 FASCTVFVNVSFSSEGTPLAVFASSFSISLVVSFLVFLILICILIVMILR--HKQKDTIN 2182

Query: 287  N 287
            N
Sbjct: 2183 N 2183



 Score = 51.6 bits (122), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 55/201 (27%), Positives = 93/201 (46%), Gaps = 14/201 (6%)

Query: 38  TSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLR--VKYWLSN-DYGERFSIS-R 93
           T+L   +F + +Y+    E++P +  + TV   +P +    + Y +S+ D G +FSI  R
Sbjct: 25  TTLAPAEFERPKYTFLVYEDVPEDSPIGTVKAREPLNSSEPIFYRISSGDLGGKFSIHPR 84

Query: 94  QGDISLMQCLDYETEDSYRFTVYAT--DTLMTTSATVNISVVNVNDWDPRFRYPQYELFL 151
            G I   + LD+ET+     TV A        +S  VNI+V++VND  P F     E+ +
Sbjct: 85  LGTIRTRKPLDHETQPVVVLTVQAQLGSAPACSSTEVNITVMDVNDNHPAFLRTSDEIRI 144

Query: 152 PHIPLADLTPGSVIGKVEAADGDKGDR--VTLSLRGPYEKMFSINDSGHISIVD--LSAL 207
                    PG+ +    A D D G    +  S+  P   +F+I+ +  +  ++  L A 
Sbjct: 145 SQT----TPPGTALYLARAEDRDSGRNGLIRYSIASPQPGVFAIDRALGVLFLNGSLGAG 200

Query: 208 NTSTIQLVVVATDTGNPPRQA 228
               + L + A D G  P+ A
Sbjct: 201 EQRELTLTLRAEDQGVHPQAA 221



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 46/144 (31%), Positives = 66/144 (45%), Gaps = 13/144 (9%)

Query: 95  GDISLMQCLDYETEDSYRFTVYA----TDTLMTTSATVNISVVNVNDWDPRFRYPQYELF 150
           G I L +  DYE+  +Y F V+A       L   S TV + V + ND  P F +    L 
Sbjct: 296 GWIYLRRQFDYESTQTYNFRVFAWIPEDGFLQNVSTTVIVRVWDENDNSPTFLHDVLFLK 355

Query: 151 LPHIPLADLTPGSVIGKVEAADGDKGDRVTLSL----RGPYEKMFSINDSGHISIVDLSA 206
           +   P+    P  VIGK+ A D D G    L       G + KM + N    I+ V L  
Sbjct: 356 VEESPV----PQGVIGKITAIDMDSGKNGQLLYFLLSDGKFFKM-NPNTGELINWVALDR 410

Query: 207 LNTSTIQLVVVATDTGNPPRQASV 230
            +    ++ V+ TD G+PPR A++
Sbjct: 411 EHRGHHEMTVLVTDRGSPPRNATM 434



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 57/209 (27%), Positives = 95/209 (45%), Gaps = 30/209 (14%)

Query: 56  ENLPVNYVLLTVTTNKP---RDLRVKY-WLSNDYGERFSISRQGDISLMQC-LDYETEDS 110
           E++ V  ++  +T + P   R+ +V Y  LS +    F +     +    C LDYE +  
Sbjct: 786 EDVTVGSLVHHITAHDPDEGRNGKVTYSILSGNENMTFMLDESSGLLTTTCPLDYEMKTQ 845

Query: 111 YRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGK 167
           +  TV A D     +++S T+ ++V++VND  P F+   YE  +      +  PG  + +
Sbjct: 846 HILTVLALDDGTPALSSSQTLTVTVLDVNDEAPVFKQHLYEASVKE----NQNPGEFVTR 901

Query: 168 VEAADGDKGDRVTLSLR---GPYEKMFSIN-DSGHI---SIVDLSALNTSTIQLVVVATD 220
           VEA D D G    L      G   ++F IN D+G +   +I+D       T++++V    
Sbjct: 902 VEALDRDSGVNSKLQFEIMPGASFELFEINSDTGEVVTTTILDREIQEVFTLRVLV---R 958

Query: 221 TGNPPRQASVPAIM--------HFPEAIV 241
            G  P  +S   I+        H PE IV
Sbjct: 959 DGGFPSLSSTTTILCTVEDENDHAPEFIV 987



 Score = 45.4 bits (106), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 43/148 (29%), Positives = 77/148 (52%), Gaps = 11/148 (7%)

Query: 86   GERFSISRQ-GDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRY 144
            G +F+I +  G + L++ LD+E    Y   +  +D++  T   + + V++VND  P F  
Sbjct: 1546 GTKFAIDQNTGVVVLVKTLDFEEMTEYELLIQISDSVHYTEGALVVRVLDVNDNPPVFSQ 1605

Query: 145  PQYELFLPH-IPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSIN-DSGHI-SI 201
              Y++ +P  IP+     G  +  + A D +  + ++  +     K FSI+  +G I +I
Sbjct: 1606 DFYQVTVPESIPV-----GYSVLTLSATDLESNENISYRILSS-SKEFSIDPKNGTIFTI 1659

Query: 202  VDLSALNT-STIQLVVVATDTGNPPRQA 228
              +  L+T ST Q +V A+D GNP  +A
Sbjct: 1660 SPVLLLDTISTTQFLVEASDGGNPDLRA 1687



 Score = 41.6 bits (96), Expect = 0.63,   Method: Compositional matrix adjust.
 Identities = 53/198 (26%), Positives = 86/198 (43%), Gaps = 16/198 (8%)

Query: 50   YSVSALENLPVNYVLLTVTT-NKPRDL--RVKYWLSNDYGERFSIS-RQGDISLMQCLDY 105
            Y  S  E+  V  V+L ++  +K   L  + +Y+L+++    F+I    G +     LD 
Sbjct: 1094 YQSSVREDAEVGTVVLVLSAVDKDEGLNGQTEYFLTDEASGAFTIDPMSGTLKTSNTLDR 1153

Query: 106  ETEDSYRFTVYATDTLM----TTSATVNISVVNVNDWDPRFRYPQYELFL-PHIPLADLT 160
            E    + F+  A D  +    +T+  + + V +VND DP      +++FL P  P    T
Sbjct: 1154 EARSQHTFSAVARDCSIQGSRSTTVIIKVYVTDVNDNDPVLEQNPFDVFLSPESPTNQTT 1213

Query: 161  PGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSIND-SGHISIVDLSALNTSTIQLVVVA 218
               VI  V A D D G   T+       + MFSI+  +G I      +     I L +  
Sbjct: 1214 ---VI--VRADDLDLGPNGTVVFSFAETQSMFSIDKYTGEIQFQQNPSSEYFPIWLQLKV 1268

Query: 219  TDTGNPPRQASVPAIMHF 236
            TD G P R  +   ++H 
Sbjct: 1269 TDQGIPARTTTGLLVIHM 1286



 Score = 41.2 bits (95), Expect = 0.81,   Method: Compositional matrix adjust.
 Identities = 48/199 (24%), Positives = 87/199 (43%), Gaps = 18/199 (9%)

Query: 45   FSKNEYSVSALENL-PVNYVLLTVTTNKPRDLRVKYWLSNDYGERFSI----SRQGDISL 99
            F ++ Y  S  EN  P  +V      ++   +  K       G  F +    S  G++  
Sbjct: 880  FKQHLYEASVKENQNPGEFVTRVEALDRDSGVNSKLQFEIMPGASFELFEINSDTGEVVT 939

Query: 100  MQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
               LD E ++ +   V   D     ++++ T+  +V + ND  P F    Y++ +    L
Sbjct: 940  TTILDREIQEVFTLRVLVRDGGFPSLSSTTTILCTVEDENDHAPEFIVSSYDIEV----L 995

Query: 157  ADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIND-SGHISIVD-LSALNTST 211
             +  P  V+  V A+D D G+   +    + G  ++ F+IN+ SG +S    L     S 
Sbjct: 996  ENQEP-EVVYTVLASDMDAGNNRAVEYHIIDGNTDECFTINEMSGELSTTRALDREQISN 1054

Query: 212  IQLVVVATDTGNPPRQASV 230
              LV++ +D G+PPR + +
Sbjct: 1055 FTLVILCSDLGDPPRSSVI 1073



 Score = 41.2 bits (95), Expect = 0.95,   Method: Compositional matrix adjust.
 Identities = 38/148 (25%), Positives = 66/148 (44%), Gaps = 19/148 (12%)

Query: 56   ENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTV 115
            EN  V Y +++  +     +  K++ S      +   + G + L+  LD E   S+   +
Sbjct: 1737 ENTYVEYSIISGNSQNNFHVETKFFHS-----EYPYKQVGYLVLLHSLDREASASHELVI 1791

Query: 116  YATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTP-GSVIGKVEAA 171
             A+D+    ++++A ++I V++VND  P F    Y     H  + + TP GS I  V A 
Sbjct: 1792 LASDSGCPPLSSTAVISIQVLDVNDNPPNFSSLSY-----HTHVKESTPLGSHITVVSAN 1846

Query: 172  DGDKGDRVTLSLRGPYEKMFSINDSGHI 199
            D D G    +        + S N+ GH 
Sbjct: 1847 DRDTGSHAEI-----IYNIISGNEKGHF 1869



 Score = 39.7 bits (91), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 38/140 (27%), Positives = 61/140 (43%), Gaps = 13/140 (9%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRD----LRVKYWL--SNDYGERFSISRQGDIS 98
            FS   Y     E+ P+   +  V+ N  RD      + Y +   N+ G  +     G + 
Sbjct: 1821 FSSLSYHTHVKESTPLGSHITVVSAND-RDTGSHAEIIYNIISGNEKGHFYLEENTGVLY 1879

Query: 99   LMQCLDYETEDSYRFTVYATDTLMT--TSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
            L++ LDYE    +  TV A+D      + A V +SV++ ND  P+F +  +   +P    
Sbjct: 1880 LIKPLDYEKMTKFTLTVQASDAEKKHFSFAVVFVSVLDDNDHAPQFMFSSFSCIVPE--- 1936

Query: 157  ADLTPGSVIGKVEAADGDKG 176
             +L   S I  + A D D G
Sbjct: 1937 -NLPISSTICSINALDFDAG 1955



 Score = 38.9 bits (89), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 59/132 (44%), Gaps = 12/132 (9%)

Query: 49  EYSVSALENLPVNYVLLTVTTNKP---RDLRVKYWLSN-DYGERFSI-SRQGDISLMQCL 103
           E  V  LE  PVN ++ TV    P    +  V Y +S+ D  + F I +  G+I     L
Sbjct: 458 ELHVKVLEGQPVNMLVTTVFAKDPDEGNNAEVTYSVSSEDSSDHFKIDANSGEIRTTTIL 517

Query: 104 DYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLT 160
            Y+   SYR +V ATD     +   A VNI V+ ++            L +P     +L 
Sbjct: 518 SYDYRPSYRMSVIATDQGVPPLQGQAVVNIQVIPLSKGRAIMSQNIRHLIIPE----NLK 573

Query: 161 PGSVIGKVEAAD 172
           P  ++  ++++D
Sbjct: 574 PTKIMSLIKSSD 585


>gi|397490019|ref|XP_003816007.1| PREDICTED: cadherin-23 [Pan paniscus]
          Length = 3354

 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 59/195 (30%), Positives = 90/195 (46%), Gaps = 20/195 (10%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWLSNDYGERFSIS-RQGDISLM 100
            F +  Y  +  E++PV  ++LTVT           ++Y L  D   +F+I+   GDI ++
Sbjct: 2402 FDQPSYQEAVFEDVPVGTIILTVTATDADSGNFALIEYSLG-DGESKFAINPTTGDIYVL 2460

Query: 101  QCLDYETEDSYRFTVYATDT-------LMTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
              LD E +D Y  T  A D            S  V I V++VND  P+F  PQ+   +  
Sbjct: 2461 SSLDREKKDHYILTALAKDNPGDVASNRRENSVQVVIQVLDVNDCRPQFSKPQFSTSV-- 2518

Query: 154  IPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIN-DSGHISIVDLSALNTS 210
                +   G+ +  + A D D+G    +T SL GP  + F ++ DSG ++       +  
Sbjct: 2519 --YENEPAGTSVITMMATDQDEGPNGELTYSLEGPGVEAFHVDMDSGLVT-TQRPLQSYE 2575

Query: 211  TIQLVVVATDTGNPP 225
               L VVATD G PP
Sbjct: 2576 RFNLTVVATDGGEPP 2590



 Score = 54.7 bits (130), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 63/210 (30%), Positives = 99/210 (47%), Gaps = 28/210 (13%)

Query: 45  FSKNEYSVSALENLPVNYVLLTV--TTNKPRDL-RVKYWLSNDYGERFSISRQ-GDISLM 100
           FS+  Y++S  EN+ V   +LTV  T N       V Y+ S+D  +RFS+ +  G I L+
Sbjct: 460 FSQPLYNISLYENVTVGTSVLTVLATDNDAGTFGEVNYFFSDD-PDRFSLDKDTGLIMLI 518

Query: 101 QCLDYETEDSYRFTVYATDTL-MTTSATVNISVVNVNDWDPRFRYPQYELFL----PHIP 155
             LDYE    +  T+ A D     T+  V I+V++VND  P F+   Y   L    P + 
Sbjct: 519 ARLDYELIQRFTLTIIARDGGGEETTGRVRINVLDVNDNVPTFQKDAYVGALRENEPSV- 577

Query: 156 LADLTPGSVIGKVEAADGDK--GDRVTLSL-----RGPYEKMFSINDSGHISI---VDLS 205
                  + + ++ A D D    +++T S+      G Y  +      G IS+   +D  
Sbjct: 578 -------TQLVRLRATDEDSPPNNQITYSIVSASAFGSYFDISLYEGYGVISVSRPLDYE 630

Query: 206 ALNTSTIQLVVVATDTGNPPRQASVPAIMH 235
            ++   I L V+A D GNPP  ++VP  + 
Sbjct: 631 QISNGLIYLTVMAMDAGNPPLNSTVPVTIE 660



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 67/217 (30%), Positives = 99/217 (45%), Gaps = 42/217 (19%)

Query: 45  FSKNEYSVSALENLPVNY-VLLTVTTNKPRDLRVKYWLSNDYGE-----------RFSI- 91
           FSK  Y VS +EN+     VL    T+  R        S +YG+           +F I 
Sbjct: 671 FSKPSYFVSVVENIMAGATVLFLNATDLDR--------SREYGQESIIYSLEGSTQFRIN 722

Query: 92  SRQGDISLMQCLDYETEDSYRFTVYATD-----TLMTTSATVNISVVNVNDWDPRFRYPQ 146
           +R G+I+    LD ET+  Y   V A D        T  ATVNI+++++ND  P ++   
Sbjct: 723 ARSGEITTTSLLDRETKSEYILIVRAVDGGVGHNQKTGIATVNITLLDINDNHPTWKDAP 782

Query: 147 YELFLPHIPLADLT-PGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSIND-SGHI---- 199
           Y     +I L ++T P S +  V A D D G+  TL     P  K +S+N  +G I    
Sbjct: 783 Y-----YINLVEMTPPDSDVTTVVAVDPDLGENGTLVYSIEPPNKFYSLNSTTGKIRTTH 837

Query: 200 SIVDLSALNTSTIQL----VVVATDTGNPPRQASVPA 232
           +++D    +    +L    VV  TD G PP +A+  A
Sbjct: 838 AMLDRENPDPHEAELMRKIVVSVTDCGRPPLRATSSA 874



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 60/204 (29%), Positives = 90/204 (44%), Gaps = 25/204 (12%)

Query: 43   LQFSKNEYSVSALENLPVNYVLLTVTTNKPRDL-----RVKYWLSNDYGERFSISR-QGD 96
            +QFS   Y  + LENL +   ++ V      +L     R   +        F I    G 
Sbjct: 1311 VQFSNASYEAAILENLALGTEIVRVQAYSIDNLNQITYRFDAYTITQAKALFKIDAITGV 1370

Query: 97   ISLMQCLDYETEDSYRFTVYATDTLMTTSATVN--ISVVNVNDWDPRFRYPQYELFLPHI 154
            I++   +D E  D Y  TV A D      +TV   I+V++ ND  PRF +         I
Sbjct: 1371 ITVQGLVDREKGDFYTLTVVADDGGPKVDSTVKVYITVLDENDNSPRFDFTSDSAV--SI 1428

Query: 155  PLADLTPGSVIGKVEAADGDKGDR-------VTLSLRGPYEKMFSINDS-GHISI---VD 203
            P  D   G  +  V+A D D G         V+ ++ G +E + + NDS G +S+   +D
Sbjct: 1429 P-EDCLVGQQVATVKAWDPDAGSNGQVVFSLVSGNIAGAFE-IVTTNDSIGEVSVARPLD 1486

Query: 204  LSALNTSTIQLVVVATDTGNPPRQ 227
               L+   +Q  VVA+D G PPR+
Sbjct: 1487 REELDHYILQ--VVASDRGTPPRK 1508



 Score = 45.4 bits (106), Expect = 0.051,   Method: Compositional matrix adjust.
 Identities = 42/148 (28%), Positives = 70/148 (47%), Gaps = 19/148 (12%)

Query: 44  QFSKNEYSVSALENLPVNYVL--LTVTTNKPRDLRV----KYWLSNDYGERF-----SIS 92
           +F+ +EYSV+  E   V + L       +K  +L +    + +L  +    F     S+ 
Sbjct: 347 EFNSSEYSVAITELAQVGFALPLFIQVVDKDENLGLNSMFEVYLVGNNSHHFIISPTSVQ 406

Query: 93  RQGDISLMQC--LDYETEDSYRFTVYATDTL--MTTSATVNISVVNVNDWDPRFRYPQYE 148
            + DI ++    LDYET D Y F ++A +++      A V I+++N ND  P F  P Y 
Sbjct: 407 GKADIRILVAIPLDYETVDRYDFDLFANESVPDHVGYAKVKITLINENDNRPIFSQPLYN 466

Query: 149 LFLPHIPLADLTPGSVIGKVEAADGDKG 176
           + L      ++T G+ +  V A D D G
Sbjct: 467 ISL----YENVTVGTSVLTVLATDNDAG 490



 Score = 44.3 bits (103), Expect = 0.091,   Method: Compositional matrix adjust.
 Identities = 45/153 (29%), Positives = 71/153 (46%), Gaps = 20/153 (13%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVT-TNKPRDL--RVKYWLSNDYGERFSIS------RQG 95
            FS    +V  LEN P  + +L VT T++   L   + Y +     +RF I       R G
Sbjct: 2069 FSPATLTVHLLENCPPGFSVLQVTATDEDSGLNGELVYRIEAGAQDRFLIHLVTGVIRVG 2128

Query: 96   DISLMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLP 152
            + ++    D E ++SYR TV ATD     ++ +A V I + ++ND  P F  P   + + 
Sbjct: 2129 NATI----DREEQESYRLTVVATDRGTVPLSGTAIVTILIDDINDSRPEFLNPIQTVSV- 2183

Query: 153  HIPLADLTPGSVIGKVEAADGDKGDRVTLSLRG 185
               L    PG+VI  + A D D   ++   + G
Sbjct: 2184 ---LESAEPGTVIANITAIDHDLNPKLEYHIVG 2213



 Score = 43.9 bits (102), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 62/235 (26%), Positives = 106/235 (45%), Gaps = 45/235 (19%)

Query: 65   LTVTTNKPRDLRVKYWLS---NDYG---------------ERFSIS-RQGDISLMQCLDY 105
            ++V+ + PR+ RV  WL+   ND G                +FS+  R   +  +  LD 
Sbjct: 1002 VSVSEDVPREFRV-VWLNCTDNDVGLNAELSYFITGGNVDGKFSVGYRDAVVRTVVGLDR 1060

Query: 106  ETEDSYRFTVYATDT-----LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLT 160
            ET  +Y   + A D        T +ATV ++V++VND  P F    YE  +P     D+ 
Sbjct: 1061 ETTAAYTLILEAIDNGPVGKRHTGTATVFVTVLDVNDNRPIFLQSSYEASVPE----DIP 1116

Query: 161  PGSVIGKVEAADGDKGD--RVTLS-LRGPYEKMFSINDSGHISIVDLSALN---TSTIQL 214
             G  I +++A D D+G+  RV    L G +   F I+ S  + +     L+    S+  L
Sbjct: 1117 EGHSIVQLKATDADEGEFGRVWYRILHGNHGNNFRIHVSNGLLMRGPRPLDRERNSSHVL 1176

Query: 215  VVVATDTGNPPRQASVPAIMHFPE------AIVQQASSKLN----SGTSSTVLII 259
            +V A +    P ++SV  I++  +         QQ  S+L     +G  ++V+++
Sbjct: 1177 IVDAYNHDLGPMRSSVRVIVYVEDINDEAPVFTQQQYSRLGLRETAGIGTSVIVV 1231



 Score = 40.8 bits (94), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 61/208 (29%), Positives = 88/208 (42%), Gaps = 24/208 (11%)

Query: 27  ALATLIVSKAGTSLRELQFSKNEYSVSAL---ENLPVNYVLLTVTTNKPRDLR---VKYW 80
           A   +++S     +  L F  N +  + L   E+ PV     +VT    RD+    + + 
Sbjct: 12  AWLLVLISGCWGQVNRLPFFTNHFFDTYLLISEDTPVGS---SVTQLLARDMDNDPLVFG 68

Query: 81  LSNDYGERFSISR--QGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDW 138
           +S +   RF       G + L Q LD ET+  +      +D     +  VNI V +VND 
Sbjct: 69  VSGEEASRFFAVEPDTGVVWLRQPLDRETKSEFTVEFSVSDHQGVITRKVNIQVGDVNDN 128

Query: 139 DPRFRYPQYELFLPHIPLADLTP-GSVIGKVEAADGD--KGDRVTLSLRGPYEKMFSIND 195
            P F    Y + +P     + TP G+ I  V A D D   G  V  S + P  + F+I D
Sbjct: 129 APTFHNQPYSVRIP-----ENTPVGTPIFIVNATDPDLGAGGSVLYSFQPP-SQFFAI-D 181

Query: 196 SGH---ISIVDLSALNTSTIQLVVVATD 220
           S H     I +L    T   QL V ATD
Sbjct: 182 SAHGIVTVIRELDYETTQAYQLTVNATD 209



 Score = 39.7 bits (91), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 39/119 (32%), Positives = 60/119 (50%), Gaps = 11/119 (9%)

Query: 123 TTSATVNISVVNVNDWDPRFR-YPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTL 181
           T+SATV ++++++ND DP F+  P     L  IP      G  I +V A D D+G    +
Sbjct: 871 TSSATVFVNLLDLNDNDPTFQNLPFVAEVLEGIP-----AGVSIYQVVAIDLDEGLNGLV 925

Query: 182 SLRGP--YEKM-FSINDSGHISI--VDLSALNTSTIQLVVVATDTGNPPRQASVPAIMH 235
           S R P    +M F IN S  + +   +L     +  QL VVA+D G P + ++    +H
Sbjct: 926 SYRMPVGMPRMDFLINSSSGVVVTTTELDRERIAEYQLRVVASDAGTPTKSSTSTLTIH 984



 Score = 39.7 bits (91), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 32/107 (29%), Positives = 49/107 (45%), Gaps = 8/107 (7%)

Query: 92   SRQGDISLMQCLDYETEDSYRFTVYATDTLMTTSAT---VNISVVNVNDWDPRFRYPQYE 148
            S  G +   + +DYE      FTV A+D      A    V + +V++ND +P F  P Y+
Sbjct: 2349 SSAGKVIANRTVDYEEVHWLNFTVRASDNGSPPRAAEIPVYLEIVDINDNNPIFDQPSYQ 2408

Query: 149  LFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSIN 194
              +      D+  G++I  V A D D G+   +    G  E  F+IN
Sbjct: 2409 EAV----FEDVPVGTIILTVTATDADSGNFALIEYSLGDGESKFAIN 2451



 Score = 38.9 bits (89), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 55/209 (26%), Positives = 84/209 (40%), Gaps = 34/209 (16%)

Query: 41   RELQFSKNEYSVSALE-----NLPVNYVLLTVTTNKPRDLRVKYWLSNDYGERFSISR-Q 94
             E+    N Y V A +     N  V Y  L    N+        W      E F+I    
Sbjct: 2624 EEIPLRSNVYEVYATDKDEGLNGAVRYSFLKTAGNRD-------W------EFFTIDPIS 2670

Query: 95   GDISLMQCLDYETEDSYRFTVYATD----TLMTTSATVNISVVNVNDWDPRF-----RYP 145
            G I   Q LD E++  Y   + A+D        T   + +++ +++D +P F       P
Sbjct: 2671 GLIQTAQRLDRESQAVYSLILVASDLGQPVPYETMQPLQVALEDIDDNEPLFVRPPKGSP 2730

Query: 146  QYELF-LP-HIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSGHISIV- 202
            QY+L  +P H P   L  G+V G V+A +G           G  EK F +   GH+ ++ 
Sbjct: 2731 QYQLLTVPEHSPRGTLV-GNVTGAVDADEGPNAIVYYFIAAGNEEKNFHLQPDGHLLVLR 2789

Query: 203  DLSALNTSTIQLVVVATD--TGNPPRQAS 229
            DL     +    +V A+   +  PPR  S
Sbjct: 2790 DLDREREAIFSFIVKASSNRSWTPPRGPS 2818



 Score = 38.9 bits (89), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 33/119 (27%), Positives = 55/119 (46%), Gaps = 11/119 (9%)

Query: 125  SATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG-----DRV 179
            +A + ++V++VND  P+F+      ++  I L   TPG+ +  V A D DKG        
Sbjct: 2276 NAKLTVNVLDVNDNTPQFKPFGIPYYMERI-LEGATPGTTLIAVAAVDPDKGLNGLVTYT 2334

Query: 180  TLSLRGPYEKMFSINDSGHI---SIVDLSALNTSTIQLVVVATDTGNPPRQASVPAIMH 235
             L L  P       + +G +     VD   ++   +   V A+D G+PPR A +P  + 
Sbjct: 2335 LLDLVPPGYVQLEDSSAGKVIANRTVDYEEVHW--LNFTVRASDNGSPPRAAEIPVYLE 2391


>gi|241758144|ref|XP_002401744.1| conserved hypothetical protein [Ixodes scapularis]
 gi|215508485|gb|EEC17939.1| conserved hypothetical protein [Ixodes scapularis]
          Length = 2750

 Score = 63.5 bits (153), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 66/222 (29%), Positives = 102/222 (45%), Gaps = 17/222 (7%)

Query: 15  VRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVT-TNKPR 73
           V A  +    R A A++++     +  +  F    Y  +  E  P    +++VT +++  
Sbjct: 615 VVARDHGTPSRSATASILLRVQDVNDNDPVFEPRTYEATVSEADPPGTPVVSVTASDRDE 674

Query: 74  DLRVKYWL-SNDYGERFSI---SRQGDISLMQCLDYETEDSYRFTVYATDT-LMTTSATV 128
             R+ Y + S +  ERF I   +RQ  +S+ Q LDY+ E  +   V ATD+   + SATV
Sbjct: 675 HSRLVYQIASGNTRERFGIVSHNRQAVVSVAQPLDYKLERRFVLVVTATDSGGRSDSATV 734

Query: 129 NISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDR--VTLSLRGP 186
            ++V + N   P F    Y   +P     D+  G+ +  VEA DGD G    VT +L   
Sbjct: 735 YLNVSDANTHRPTFERTPYTASIPE----DVPVGTTVLVVEARDGDVGRNALVTYTLEED 790

Query: 187 YEKMFSINDSGHISIVDLSALNTSTI---QLVVVATDTGNPP 225
             +      SG  S+V    L+   +    LVV A D GNPP
Sbjct: 791 VPEFRMDPSSG--SLVTARPLDRERVGGYTLVVAAQDGGNPP 830



 Score = 55.1 bits (131), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 54/208 (25%), Positives = 94/208 (45%), Gaps = 22/208 (10%)

Query: 44  QFSKNEYSVSALE-----NLPVNYVLLTVTTNKPRDLRVKYWL--SNDYGERFSISRQGD 96
           QFS+  YSV   E     N P    +    +++  +  ++Y L   N  G     S  G 
Sbjct: 431 QFSERSYSVKVSEDVNWLNHPEVARIRATDSDQGANAALRYSLIGGNTQGHFAMDSLTGS 490

Query: 97  ISLMQCLDYETEDSYRFTVYATDTLMTTSATVN---ISVVNVNDWDPRFRYPQYELFLP- 152
           ++++  LDYE+  SYR  V   D    + +      ++V+++ND DP+F    +   +P 
Sbjct: 491 VTVLSPLDYESARSYRLVVRVQDGGTPSRSNTTQLLVNVLDINDNDPKFYTSLFHETVPE 550

Query: 153 HIPLADLTPGSVIGKVEAADGDKGDRV----TLSLRGPYEKMFSIND-SGHISIV-DLSA 206
           ++P+     G  I +V+A D D G       TLS     +   +++D +G +S    L  
Sbjct: 551 NVPV-----GHSIVRVQAYDADDGANAEISYTLSSSERPDLPLNVDDVTGWVSTTRQLDR 605

Query: 207 LNTSTIQLVVVATDTGNPPRQASVPAIM 234
             +++    VVA D G P R A+   ++
Sbjct: 606 EESASFNFQVVARDHGTPSRSATASILL 633



 Score = 51.6 bits (122), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 65/223 (29%), Positives = 94/223 (42%), Gaps = 32/223 (14%)

Query: 27  ALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSN 83
           A +TL V+    +     F +  Y  S  E++P  + +LTV     +   +  V Y + N
Sbjct: 306 ATSTLQVNVLDENDHAPTFEQATYEASIRESVPTGFTVLTVRATDQDTGSNANVDYSILN 365

Query: 84  DYGER--FSI-SRQGDISLMQCLDYETEDSYRFTVYATDTLMTT-----SATVNISVVNV 135
             G    F I S+ G I+    LD E    Y   V ATD+   T     SATV I+V++ 
Sbjct: 366 PDGTNGAFGIDSKSGIITTRSSLDRELTSFYALVVQATDSGPVTDRKSASATVQITVLDE 425

Query: 136 NDWDPRFRYPQYEL-------FLPHIPLADLTPGSVIGKVEAADGDKGDRVTL--SLRGP 186
           ND  P+F    Y +       +L H  +A         ++ A D D+G    L  SL G 
Sbjct: 426 NDNYPQFSERSYSVKVSEDVNWLNHPEVA---------RIRATDSDQGANAALRYSLIGG 476

Query: 187 YEKMFSINDSGHISIVDLSALN---TSTIQLVVVATDTGNPPR 226
             +     DS   S+  LS L+     + +LVV   D G P R
Sbjct: 477 NTQGHFAMDSLTGSVTVLSPLDYESARSYRLVVRVQDGGTPSR 519



 Score = 39.3 bits (90), Expect = 3.6,   Method: Composition-based stats.
 Identities = 59/223 (26%), Positives = 83/223 (37%), Gaps = 20/223 (8%)

Query: 13  LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTT--- 69
           LVV A     +   A   L VS A T      F +  Y+ S  E++PV   +L V     
Sbjct: 718 LVVTATDSGGRSDSATVYLNVSDANT--HRPTFERTPYTASIPEDVPVGTTVLVVEARDG 775

Query: 70  NKPRDLRVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATD---TLMTTSA 126
           +  R+  V Y L  D  E       G +   + LD E    Y   V A D     ++ + 
Sbjct: 776 DVGRNALVTYTLEEDVPEFRMDPSSGSLVTARPLDRERVGGYTLVVAAQDGGNPPLSDTT 835

Query: 127 TVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG----DRVTLS 182
            V + + +VND  P F    Y   +      D   G+ +  V A D D G     R T  
Sbjct: 836 NVELEIADVNDNTPVFPTAGYTSTVSE----DALVGTSVAHVSALDADLGLNGQIRYTFL 891

Query: 183 LRGPYEKMFSINDSGHISIVDLSALNTSTI---QLVVVATDTG 222
                   F I+ +  I   +  AL+  T+    LV  A D G
Sbjct: 892 GGNDGGGAFGIDPTSGIVRTN-RALDRETVAAYHLVAFAVDRG 933



 Score = 37.7 bits (86), Expect = 8.3,   Method: Composition-based stats.
 Identities = 33/105 (31%), Positives = 51/105 (48%), Gaps = 10/105 (9%)

Query: 95   GDISLMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFL 151
            G +   + LD ET  +Y    +A D     ++ S +V + V +VND  PRF   +  LF+
Sbjct: 907  GIVRTNRALDRETVAAYHLVAFAVDRGSPSLSASVSVVVYVEDVNDSPPRFSADRIRLFV 966

Query: 152  PHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSI 193
            P     +   GSV G+V+A D D+G    +    + GP    FS+
Sbjct: 967  PE----NSPVGSVAGEVQAHDPDEGPNAVVQYAIVGGPDADAFSL 1007


>gi|386118331|gb|AFI99113.1| dachsous protocadherin [Clytia hemisphaerica]
          Length = 3438

 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 54/164 (32%), Positives = 79/164 (48%), Gaps = 14/164 (8%)

Query: 67   VTTNKPRDLRVKYWL---SNDYGERFSIS-RQGDISLMQCLDYETEDSYRFTVYATDTLM 122
            V  + P++  VKY L   S D  + F +   +G I L++ LDYE + SY F V A    +
Sbjct: 1873 VDKDTPKNAFVKYALVNPSRDVADHFEVDVEKGAIYLIKSLDYEQQRSYTFKVKAEGKKV 1932

Query: 123  TT--SATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVT 180
             +    TV I V + ND  P F    Y   LP I +     G+VIG V A D D+  +  
Sbjct: 1933 DSFDQTTVQIQVQDENDNKPVFTQSVYNFSLPEIKV-----GAVIGTVRATDRDQDGQQQ 1987

Query: 181  LSLR-GPYEKMFSIN-DSGHISIVDLSALNTSTIQLVVVATDTG 222
            +  R  P +  F IN ++G + ++D   +     +L VVA D G
Sbjct: 1988 VRYRFDPPDWNFQINPETGEVHLMD-GEITRGQYRLHVVAMDVG 2030



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 39/136 (28%), Positives = 66/136 (48%), Gaps = 17/136 (12%)

Query: 52   VSALENLPVNYVLLT-------VTTNKPRDLRVKYWLSNDYGERFSISRQGDISLMQCLD 104
            VS  EN P N ++LT       V  N     R+   L N+  + F +SR G++ + + LD
Sbjct: 985  VSVRENNPPNQLILTLNASDADVGNNGQFFFRL---LPNEDSKSFRMSRNGNLYVTKSLD 1041

Query: 105  YETEDSYRFTVYATDTLM---TTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTP 161
             ET+ +Y       D  +    + A + I+V ++ND  P+F    Y   +      +L P
Sbjct: 1042 RETKSTYSLKARVQDLGIPPQHSEAAITINVDDLNDESPKFERLHYNFEVSE----ELQP 1097

Query: 162  GSVIGKVEAADGDKGD 177
            G+++G++ A D D G+
Sbjct: 1098 GTIVGEIIAVDADTGE 1113



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 50/170 (29%), Positives = 75/170 (44%), Gaps = 13/170 (7%)

Query: 89   FSISR-QGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQY 147
            FSI    G I L   LDYET  S++  + A D +  T   + I+V +VND  PRF    Y
Sbjct: 2317 FSIDEYSGKIFLQHTLDYETNHSFKLRICAFDGVHRTYRDLQINVEDVNDHSPRFSKSIY 2376

Query: 148  ELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSI-NDSGHISIVDLS 205
             +   + PL        I KV+A D D+G+   +  + G     F+I  D+G I      
Sbjct: 2377 TVKNVYTPLR---KNQFIIKVDATDPDQGEFGFVQYKLGTALDPFTIEQDTGKIYANKPF 2433

Query: 206  ALNTSTIQLVVVATDTGNPPRQASVPAI-------MHFPEAIVQQASSKL 248
             L     +L V+A D+ N     S  A+       +H P    +Q++ + 
Sbjct: 2434 QLTPGIAKLTVIAYDSKNGQGSRSSTALVEIHVSQLHQPNPYFKQSTYRF 2483



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 60/203 (29%), Positives = 90/203 (44%), Gaps = 18/203 (8%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYG----ERFSISR-QGD 96
            F K  Y V+  E++ V   LL V     + PR    K   S   G    E   I+   G 
Sbjct: 2581 FEKQAYHVTQKEDVTVGTKLLQVKATDADDPRQANGKLVYSIHSGQEATEWLRINETDGW 2640

Query: 97   ISLMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
            I   + LD ET D+ + T+   D     M    ++N++V++VND +P F Y      +  
Sbjct: 2641 IETREELDRETTDTIQLTIRVADIEGAGMEAFTSLNVTVLDVNDNEPSFNYDLIRFNVIK 2700

Query: 154  IPLADLTPGSVIGKVEAADGDKGDRVTLSLR---GPYEKMFSINDS--GHI-SIVDLSAL 207
            I   ++ P SV+ +  A D D G+   +S R         F +N+S  G + +   L   
Sbjct: 2701 IK-ENMPPHSVVFRAGATDKDIGENGRVSYRILESGGRDYFYMNESIPGWVYTKRSLDYE 2759

Query: 208  NTSTIQLVVVATDTGNPPRQASV 230
              S+  L V+A D G P +QASV
Sbjct: 2760 KNSSYTLRVLAYDHGKPSQQASV 2782


>gi|291242490|ref|XP_002741140.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 2-like
           [Saccoglossus kowalevskii]
          Length = 2761

 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 62/199 (31%), Positives = 101/199 (50%), Gaps = 17/199 (8%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGE-RFSI-SRQGDIS 98
           QFS+  Y V   E++  N V+ ++     ++  +  ++Y +   + +  F+I S  G I+
Sbjct: 504 QFSQRTYEVIIPESISPNVVIESIIATDRDEGTNAEIRYSMVGGHSQGHFAIDSFSGQIT 563

Query: 99  LMQCLDYETEDSYRFTVYATDTLM---TTSATVNISVVNVNDWDPRFRYPQYELFLPHIP 155
           ++  +DYE   +YR  + A D+     + S  V I+V +VND +PRF    Y+  +    
Sbjct: 564 VISRIDYEITSNYRLVIRAQDSGRPPKSNSTNVVINVEDVNDNEPRFPSTLYQTSVRE-- 621

Query: 156 LADLTPGSVIGKVEAADGDKG--DRVTLSL-RGPYEKMFSIND-SGHI-SIVDLSALNTS 210
             DL  GS I  ++A D D G   ++T S+   P    FSIN+ SG I +  +L    TS
Sbjct: 622 --DLRIGSSIINLQAFDEDSGLFSQLTYSISNAPTGNPFSINENSGMIVTTRELDRETTS 679

Query: 211 TIQLVVVATDTGNPPRQAS 229
               V VA D G+PP+ A+
Sbjct: 680 RYDFVAVAQDQGDPPKSAT 698



 Score = 52.4 bits (124), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 58/191 (30%), Positives = 94/191 (49%), Gaps = 15/191 (7%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVT-TNKPRDLRVKYWL-SNDYGERFSISRQ---GDISL 99
           F+++EY+V   E+      + TVT T+   +  V Y + + +   RFSI  Q   G IS+
Sbjct: 715 FTQSEYNVVVEEDARPGTSVATVTATDADEESSVSYQITAGNTRNRFSIISQMGLGVISV 774

Query: 100 MQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADL 159
              LDY+ E  +  TV A+D  ++ +  V I++ + N + P F    Y + +      D+
Sbjct: 775 ALPLDYKQEQRFVLTVTASDNALSDNCLVYINISDANTYRPVFEQSPYSVSVDE----DV 830

Query: 160 TPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSIN-DSGHI-SIVDLSALNTSTIQLV 215
             GS +  V A DGD G+  R+T S+    E  F I+ D+G I + ++L      +  L 
Sbjct: 831 PTGSTVVVVHATDGDVGENARITYSMDNIPE--FEIDEDTGAILTKMELDRETKLSYTLH 888

Query: 216 VVATDTGNPPR 226
           V A D G  P+
Sbjct: 889 VTAQDNGLKPQ 899



 Score = 46.2 bits (108), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 42/151 (27%), Positives = 71/151 (47%), Gaps = 14/151 (9%)

Query: 95  GDISLMQCLDYETEDSYRFTVYATD-----TLMTTSATVNISVVNVNDWDPRFRYPQYEL 149
           G I+    LD ET   Y   V A D        + S  V + +++ ND  P+F    YE+
Sbjct: 453 GVITTRSRLDRETVVQYIIEVLAVDLGSNPGPQSASTEVTVDILDENDNYPQFSQRTYEV 512

Query: 150 FLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIND-SGHISIVD-L 204
            +P      ++P  VI  + A D D+G    +    + G  +  F+I+  SG I+++  +
Sbjct: 513 IIPE----SISPNVVIESIIATDRDEGTNAEIRYSMVGGHSQGHFAIDSFSGQITVISRI 568

Query: 205 SALNTSTIQLVVVATDTGNPPRQASVPAIMH 235
               TS  +LV+ A D+G PP+  S   +++
Sbjct: 569 DYEITSNYRLVIRAQDSGRPPKSNSTNVVIN 599



 Score = 45.1 bits (105), Expect = 0.054,   Method: Compositional matrix adjust.
 Identities = 54/199 (27%), Positives = 86/199 (43%), Gaps = 19/199 (9%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKP---RDLRVKYWLSNDYGERFSISRQ-GDISLM 100
            F ++ YSVS  E++P    ++ V         + R+ Y + N     F I    G I   
Sbjct: 817  FEQSPYSVSVDEDVPTGSTVVVVHATDGDVGENARITYSMDNI--PEFEIDEDTGAILTK 874

Query: 101  QCLDYETEDSYRFTVYATDTLMT---TSATVNISVVNVNDWDPRFRYPQYELFLPHIPLA 157
              LD ET+ SY   V A D  +     +  V I+V++VND  P F+   Y   +      
Sbjct: 875  MELDRETKLSYTLHVTAQDNGLKPQLDTTDVEITVIDVNDNYPVFKESSYRGEIRE---- 930

Query: 158  DLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEK--MFSINDSGHISIVD--LSALNTST 211
            D++ G+ + ++ A D D+G   R+  +  G  +    F I+ +  +   D  L     + 
Sbjct: 931  DVSKGTSVIRISAEDADEGLNKRIRYTFSGGDDGNGAFIIDSNSGLIRTDARLDREEVAV 990

Query: 212  IQLVVVATDTGNPPRQASV 230
              L   ATD G P R+ SV
Sbjct: 991  YNLEAYATDRGTPQRRTSV 1009



 Score = 38.5 bits (88), Expect = 5.7,   Method: Compositional matrix adjust.
 Identities = 47/190 (24%), Positives = 83/190 (43%), Gaps = 13/190 (6%)

Query: 13  LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTT-NK 71
           LV+RA       +     ++++    +  E +F    Y  S  E+L +   ++ +   ++
Sbjct: 578 LVIRAQDSGRPPKSNSTNVVINVEDVNDNEPRFPSTLYQTSVREDLRIGSSIINLQAFDE 637

Query: 72  PRDL--RVKYWLSND-YGERFSISRQ-GDISLMQCLDYETEDSYRFTVYATDTL---MTT 124
              L  ++ Y +SN   G  FSI+   G I   + LD ET   Y F   A D      + 
Sbjct: 638 DSGLFSQLTYSISNAPTGNPFSINENSGMIVTTRELDRETTSRYDFVAVAQDQGDPPKSA 697

Query: 125 SATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSL- 183
           +  ++I++++VND  P F   +Y + +      D  PG+ +  V A D D+   V+  + 
Sbjct: 698 TTQISITILDVNDNPPTFTQSEYNVVVEE----DARPGTSVATVTATDADEESSVSYQIT 753

Query: 184 RGPYEKMFSI 193
            G     FSI
Sbjct: 754 AGNTRNRFSI 763



 Score = 38.1 bits (87), Expect = 6.4,   Method: Compositional matrix adjust.
 Identities = 45/157 (28%), Positives = 76/157 (48%), Gaps = 16/157 (10%)

Query: 76   RVKYWLS--NDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVN 129
            R++Y  S  +D    F I S  G I     LD E    Y    YATD       TS  + 
Sbjct: 953  RIRYTFSGGDDGNGAFIIDSNSGLIRTDARLDREEVAVYNLEAYATDRGTPQRRTSVNIE 1012

Query: 130  ISVVNVNDWDPRFRYPQYELFLPHIPLADLTP-GSVIGKVEAADGDKGDR--VTLSLRGP 186
            I+V +VND  P+FR       + ++ + + +P GS++  + A D D+G    V  S+ G 
Sbjct: 1013 ITVKDVNDNSPKFRSA-----VINVEINENSPIGSLVDTIVATDPDEGMNAVVAFSIVGG 1067

Query: 187  YEKMFSIN-DSGHISI-VDLSALNTSTIQLVVVATDT 221
             E+ F+++  SG ++   +++    +  +++V AT T
Sbjct: 1068 DEQFFALDYQSGQLTTSAEMNYEERNEYEVIVRATST 1104


>gi|345799037|ref|XP_003434520.1| PREDICTED: cadherin-23 isoform 2 [Canis lupus familiaris]
          Length = 1079

 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 59/195 (30%), Positives = 90/195 (46%), Gaps = 20/195 (10%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWLSNDYGERFSIS-RQGDISLM 100
           F +  Y  +  E++PV  V+LTVT +         ++Y L +  G +F+I+   GDI ++
Sbjct: 162 FDQPSYQEAVFEDVPVGTVILTVTASDADSGNFALIEYSLGDGEG-KFAINPTTGDIYVL 220

Query: 101 QCLDYETEDSYRFTVYATDT-------LMTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
             LD E +D Y  T  A D            S  V I V++VND  P+F  PQ+   +  
Sbjct: 221 SSLDREKKDHYILTALAKDNPGDIASNRRENSVQVVIQVLDVNDCRPQFSKPQFSTSV-- 278

Query: 154 IPLADLTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSIN-DSGHISIVDLSALNTS 210
               +   G+ +  + A D D G    +  SL GP  + F ++ DSG ++       +  
Sbjct: 279 --YENEPAGTSVITMMATDQDAGSNGELAYSLEGPGVEAFHVDMDSGLVT-TKRPLQSYE 335

Query: 211 TIQLVVVATDTGNPP 225
              L VVATD G PP
Sbjct: 336 RFNLTVVATDGGQPP 350



 Score = 39.7 bits (91), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 33/104 (31%), Positives = 49/104 (47%), Gaps = 8/104 (7%)

Query: 95  GDISLMQCLDYETEDSYRFTVYATDTLMTTSAT---VNISVVNVNDWDPRFRYPQYELFL 151
           G +   + +DYE      FTV A+D      A    V + +V+VND +P F  P Y+  +
Sbjct: 112 GKVIANRTVDYEEVHWLNFTVRASDNGSPPRAAEIPVYLEIVDVNDNNPIFDQPSYQEAV 171

Query: 152 PHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSIN 194
                 D+  G+VI  V A+D D G+   +    G  E  F+IN
Sbjct: 172 ----FEDVPVGTVILTVTASDADSGNFALIEYSLGDGEGKFAIN 211



 Score = 37.7 bits (86), Expect = 8.8,   Method: Compositional matrix adjust.
 Identities = 30/122 (24%), Positives = 54/122 (44%), Gaps = 17/122 (13%)

Query: 125 SATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR 184
           +A + +++++VND  P+F+      +   I L   TPG+ +  V A D DKG    ++  
Sbjct: 36  NAKLTVNILDVNDNTPQFKPFGITYYTERI-LEGATPGTTLIAVAAVDPDKGLNGLITY- 93

Query: 185 GPYEKMFSINDSGHISIVDLSA-----------LNTSTIQLVVVATDTGNPPRQASVPAI 233
                +  +   G++ + D SA                +   V A+D G+PPR A +P  
Sbjct: 94  ----TLLDLMPPGYVQLEDASAGKVIANRTVDYEEVHWLNFTVRASDNGSPPRAAEIPVY 149

Query: 234 MH 235
           + 
Sbjct: 150 LE 151


>gi|441600761|ref|XP_004087638.1| PREDICTED: protocadherin-15 isoform 2 [Nomascus leucogenys]
          Length = 1782

 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 62/195 (31%), Positives = 100/195 (51%), Gaps = 14/195 (7%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGER-FSISRQ-GDISLMQ 101
           +F +  YS+   E + V  VLL +         V Y + N   +R F++S   G ++L +
Sbjct: 622 RFPQLMYSLEISEAMRVGAVLLNLQATDREGDSVTYAIENGDPQRVFNLSETTGILTLGK 681

Query: 102 CLDYETEDSYRFTVYATDTL--MTTSATVNISVVNVNDWDPRFRYPQYELFLP-HIPLAD 158
            LD E+ D Y   + A+D     T++ATVNI V +VND  P F     + +LP ++ + +
Sbjct: 682 ALDRESTDRYILIITASDGRPGGTSTATVNIVVTDVNDNAPVF-----DPYLPRNLSVVE 736

Query: 159 LTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDSGHI-SIVDLSALNTSTIQLV 215
               + +G+V+A D D G   +V  SL G +  +F I  +G I + V L+       +LV
Sbjct: 737 EEANAFVGQVKATDPDAGINGQVHYSL-GNFNNLFRITSNGSIYTAVKLNREVRDYYELV 795

Query: 216 VVATDTGNPPRQASV 230
           VVATD    PR +++
Sbjct: 796 VVATDGAVHPRHSTL 810



 Score = 52.0 bits (123), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 50/195 (25%), Positives = 87/195 (44%), Gaps = 28/195 (14%)

Query: 6   DFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYV-- 63
           DF Q   LV++A Q +     A A+L +     + +   F+   Y    LE+ PV     
Sbjct: 356 DFHQKFDLVIKAEQDNGHPLPAFASLHIEILDENNQSPYFTMPSYQGYILESAPVGATIS 415

Query: 64  --------LLTVTTNK------PRDLRVK----YWLSNDYGERFSISRQG---DISLMQC 102
                   L  V  +K      P  +  K    +   NDY   F++++ G    ++L+Q 
Sbjct: 416 DSLNLTSPLRIVALDKDIEDVPPSGVPTKDPELHLFLNDYTSVFTVTQTGITRYLTLLQP 475

Query: 103 LDYETEDSYRFTVYATDTLMTTSAT-VNISVVNVNDWDPRFRYPQYELFLPHIPLADLTP 161
           +D E + +Y F++ A D +  +    VNI V++ ND  P F    Y++++      D+ P
Sbjct: 476 VDREEQQTYTFSITAFDGVQESEPVIVNIQVMDANDNTPTFPEISYDVYV----YTDMRP 531

Query: 162 GSVIGKVEAADGDKG 176
           G  + ++ A D D+G
Sbjct: 532 GDSVIQLTAVDADEG 546



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 71/233 (30%), Positives = 103/233 (44%), Gaps = 26/233 (11%)

Query: 13   LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKP 72
            LVV A       R++  TL +           F+ + Y+V   ENLP    +L +   K 
Sbjct: 794  LVVVATDGAVHPRHSTLTLAIKVLDIDDNSPVFTNSTYTVLVEENLPAGTTILQIEA-KD 852

Query: 73   RDL--RVKYWLSNDYGERFSISR--QGDISLMQCLDYET----EDSYRFTVYATD---TL 121
             DL   V Y + +   + F       G++SL++ LDYE     E S  F V A D   T+
Sbjct: 853  VDLGANVSYRIRSPEVKHFFALHPFTGELSLLRSLDYEAFPDQEASITFLVEAFDIYGTM 912

Query: 122  MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDK----GD 177
                ATV + V ++ND+ P F    Y+  +      D   G+ I  V A D D       
Sbjct: 913  PPGIATVTVIVKDMNDYPPVFSKRIYKGMV----APDAVKGTPITTVYAEDADPPGLPAS 968

Query: 178  RVTLSL---RGPY-EKMFSIN-DSGH-ISIVDLSALNTSTIQLVVVATDTGNP 224
            RV   +   + PY   +F +  DSG  I+ V+L+   T+  +LVVVA D G P
Sbjct: 969  RVRYRIDDVQFPYPASIFDVEEDSGRVITRVNLNEEPTTIFKLVVVAFDDGEP 1021



 Score = 45.8 bits (107), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 56/119 (47%), Gaps = 8/119 (6%)

Query: 76  RVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDTLMT---TSATVNISV 132
           +V Y L N +   F I+  G I     L+ E  D Y   V ATD  +    ++ T+ I V
Sbjct: 758 QVHYSLGN-FNNLFRITSNGSIYTAVKLNREVRDYYELVVVATDGAVHPRHSTLTLAIKV 816

Query: 133 VNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMF 191
           ++++D  P F    Y + +      +L  G+ I ++EA D D G  V+  +R P  K F
Sbjct: 817 LDIDDNSPVFTNSTYTVLVEE----NLPAGTTILQIEAKDVDLGANVSYRIRSPEVKHF 871


>gi|218505785|ref|NP_001136240.1| protocadherin-15 isoform CD1-9 precursor [Homo sapiens]
          Length = 1935

 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 61/195 (31%), Positives = 100/195 (51%), Gaps = 14/195 (7%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGER-FSISRQ-GDISLMQ 101
           +F +  YS+   E + V  VLL +         + Y + N   +R F++S   G ++L +
Sbjct: 593 RFPQLMYSLEISEAMRVGAVLLNLQATDREGDSITYAIENGDPQRVFNLSETTGILTLGK 652

Query: 102 CLDYETEDSYRFTVYATDTL--MTTSATVNISVVNVNDWDPRFRYPQYELFLP-HIPLAD 158
            LD E+ D Y   + A+D     T++ATVNI V +VND  P F     + +LP ++ + +
Sbjct: 653 ALDRESTDRYILIITASDGRPDGTSTATVNIVVTDVNDNAPVF-----DPYLPRNLSVVE 707

Query: 159 LTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDSGHI-SIVDLSALNTSTIQLV 215
               + +G+V+A D D G   +V  SL G +  +F I  +G I + V L+       +LV
Sbjct: 708 EEANAFVGQVKATDPDAGINGQVHYSL-GNFNNLFRITSNGSIYTAVKLNREVRDYYELV 766

Query: 216 VVATDTGNPPRQASV 230
           VVATD    PR +++
Sbjct: 767 VVATDGAVHPRHSTL 781



 Score = 55.5 bits (132), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 62/241 (25%), Positives = 105/241 (43%), Gaps = 27/241 (11%)

Query: 6   DFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVN---- 61
           DF Q   LV++A Q +     A A L +     + +   F+   Y    LE+ PV     
Sbjct: 334 DFHQKFDLVIKAEQDNGHPLPAFAGLHIEILDENNQSPYFTMPSYQGYILESAPVGATIS 393

Query: 62  ----------YVLLTVTTNKPRDLRVKYWLSNDYGERFSISRQG---DISLMQCLDYETE 108
                      V L       +D  +  +L NDY   F++++ G    ++L+Q +D E +
Sbjct: 394 DSLNLTSPLRIVALDKDIEDTKDPELHLFL-NDYTSVFTVTQTGITRYLTLLQPVDREEQ 452

Query: 109 DSYRFTVYATDTLMTTSAT-VNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGK 167
            +Y F++ A D +  +    VNI V++ ND  P F    Y++++      D+ PG  + +
Sbjct: 453 QTYTFSITAFDGVQESEPVIVNIQVMDANDNTPTFPEISYDVYV----YTDMRPGDSVIQ 508

Query: 168 VEAADGDKGD--RVTLSLRGPYEKMFSIND-SGHISIV-DLSALNTSTIQLVVVATDTGN 223
           + A D D+G    +T  +    +  F IN  +G I+I   +  +   T  L V A D   
Sbjct: 509 LTAVDADEGSNGEITYEILVGAQGDFIINKTTGLITIAPGVEMIVGRTYALTVQAADNAP 568

Query: 224 P 224
           P
Sbjct: 569 P 569



 Score = 51.2 bits (121), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 71/233 (30%), Positives = 103/233 (44%), Gaps = 26/233 (11%)

Query: 13  LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKP 72
           LVV A       R++  TL +           F+ + Y+V   ENLP    +L +   K 
Sbjct: 765 LVVVATDGAVHPRHSTLTLAIKVLDIDDNSPVFTNSTYTVLVEENLPAGTTILQIEA-KD 823

Query: 73  RDL--RVKYWLSNDYGERFSISR--QGDISLMQCLDYET----EDSYRFTVYATD---TL 121
            DL   V Y + +   + F       G++SL++ LDYE     E S  F V A D   T+
Sbjct: 824 VDLGANVSYRIRSPEVKHFFALHPFTGELSLLRSLDYEAFPDQEASITFLVEAFDIYGTM 883

Query: 122 MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDK----GD 177
               ATV + V ++ND+ P F    Y+  +      D   G+ I  V A D D       
Sbjct: 884 PPGIATVTVIVKDMNDYPPVFSKRIYKGMV----APDAVKGTPITTVYAEDADPPGLPAS 939

Query: 178 RVTL---SLRGPY-EKMFSIN-DSGH-ISIVDLSALNTSTIQLVVVATDTGNP 224
           RV      ++ PY   +F +  DSG  I+ V+L+   T+  +LVVVA D G P
Sbjct: 940 RVRYRVDDVQFPYPASIFEVEEDSGRVITRVNLNEEPTTIFKLVVVAFDDGEP 992



 Score = 46.6 bits (109), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 56/119 (47%), Gaps = 8/119 (6%)

Query: 76  RVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDTLMT---TSATVNISV 132
           +V Y L N +   F I+  G I     L+ E  D Y   V ATD  +    ++ T+ I V
Sbjct: 729 QVHYSLGN-FNNLFRITSNGSIYTAVKLNREVRDYYELVVVATDGAVHPRHSTLTLAIKV 787

Query: 133 VNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMF 191
           ++++D  P F    Y + +      +L  G+ I ++EA D D G  V+  +R P  K F
Sbjct: 788 LDIDDNSPVFTNSTYTVLVEE----NLPAGTTILQIEAKDVDLGANVSYRIRSPEVKHF 842


>gi|119574817|gb|EAW54432.1| cadherin-like 23, isoform CRA_f [Homo sapiens]
          Length = 1079

 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 59/195 (30%), Positives = 90/195 (46%), Gaps = 20/195 (10%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWLSNDYGERFSIS-RQGDISLM 100
           F +  Y  +  E++PV  ++LTVT           ++Y L  D   +F+I+   GDI ++
Sbjct: 162 FDQPSYQEAVFEDVPVGTIILTVTATDADSGNFALIEYSLG-DGESKFAINPTTGDIYVL 220

Query: 101 QCLDYETEDSYRFTVYATDT-------LMTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
             LD E +D Y  T  A D            S  V I V++VND  P+F  PQ+   +  
Sbjct: 221 SSLDREKKDHYILTALAKDNPGDVASNRRENSVQVVIQVLDVNDCRPQFSKPQFSTSV-- 278

Query: 154 IPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIN-DSGHISIVDLSALNTS 210
               +   G+ +  + A D D+G    +T SL GP  + F ++ DSG ++       +  
Sbjct: 279 --YENEPAGTSVITMMATDQDEGPNGELTYSLEGPGVEAFHVDMDSGLVT-TQRPLQSYE 335

Query: 211 TIQLVVVATDTGNPP 225
              L VVATD G PP
Sbjct: 336 KFSLTVVATDGGEPP 350



 Score = 41.2 bits (95), Expect = 0.93,   Method: Compositional matrix adjust.
 Identities = 33/107 (30%), Positives = 49/107 (45%), Gaps = 8/107 (7%)

Query: 92  SRQGDISLMQCLDYETEDSYRFTVYATDTLMTTSAT---VNISVVNVNDWDPRFRYPQYE 148
           S  G +   Q +DYE      FTV A+D      A    V + +V++ND +P F  P Y+
Sbjct: 109 SSAGKVIANQTVDYEEVHWLNFTVRASDNGSPPRAAEIPVYLEIVDINDNNPIFDQPSYQ 168

Query: 149 LFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSIN 194
             +      D+  G++I  V A D D G+   +    G  E  F+IN
Sbjct: 169 EAV----FEDVPVGTIILTVTATDADSGNFALIEYSLGDGESKFAIN 211



 Score = 39.7 bits (91), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 36/124 (29%), Positives = 57/124 (45%), Gaps = 21/124 (16%)

Query: 125 SATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLS 182
           +A + ++V++VND  P+F+      ++  I L   TPG+ +  V A D DKG    VT +
Sbjct: 36  NAKLTVNVLDVNDNTPQFKPFGITYYMERI-LEGATPGTTLIAVAAVDPDKGLNGLVTYT 94

Query: 183 LRGPYEKMFSINDSGHISIVDLSALNTSTIQLV-----------VVATDTGNPPRQASVP 231
           L         +   G++ + D SA      Q V           V A+D G+PPR A +P
Sbjct: 95  L-------LDLVPPGYVQLEDSSAGKVIANQTVDYEEVHWLNFTVRASDNGSPPRAAEIP 147

Query: 232 AIMH 235
             + 
Sbjct: 148 VYLE 151


>gi|426345778|ref|XP_004040576.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin-23 [Gorilla gorilla
            gorilla]
          Length = 2916

 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 77/301 (25%), Positives = 133/301 (44%), Gaps = 33/301 (10%)

Query: 11   ITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVN--------- 61
             TL V+A   + +  ++ A + V+    +    QF  + +S    ENLP++         
Sbjct: 2281 FTLTVQASDAEKK-HFSFAVVFVNVLDDNDHAPQFMFSSFSCIVPENLPISSTICSINAL 2339

Query: 62   ------YVLLTVTTNKPRDLRVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTV 115
                  Y  LT +   P    + + +S D+         GDI   Q LDYE  + Y  TV
Sbjct: 2340 DFDAGPYGELTYSIVSP--CFLTHGMSYDHDLFLIDPLTGDIHAKQILDYENGNKYCLTV 2397

Query: 116  YATDTL-MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGD 174
             A D    T S  V + +  +++++P F   QY   LP           +IG+VEA+D D
Sbjct: 2398 QAKDKGDATASLVVWVDIEGIDEFEPIFTQDQYFFTLPE----KNKDRQLIGRVEASDAD 2453

Query: 175  KG-DRVTLSLRGPYEKMFSINDS-GHISIVDL-----SALNTS-TIQLVVVATDTGNPPR 226
             G D V L   G     FS+N + G+I ++       S LN   T+++ ++A    +  +
Sbjct: 2454 AGIDGVILYSLGTSSPFFSVNKTNGNIYLIRALPLIKSQLNKEDTMEMKIIAHSPKSDSK 2513

Query: 227  QASVPAIMHFPEAIVQQASSKLNSGTSSTVLIILGVVLIVLGFVIILLILYIHKNKHTKN 286
             AS    ++   +      ++  S  S ++++   V LI++  +I++++   HK K T N
Sbjct: 2514 FASCTVFVNVSFSSEGTPLAEFASSFSISLVVSFLVFLILICILIVMILR--HKQKDTIN 2571

Query: 287  N 287
            N
Sbjct: 2572 N 2572



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 55/201 (27%), Positives = 94/201 (46%), Gaps = 14/201 (6%)

Query: 38  TSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLR--VKYWLSN-DYGERFSISRQ 94
           T+L   +F + +Y+    E++P +  + TV   +P +    + Y +S+ D G +FSI R+
Sbjct: 370 TTLAPAEFERPKYTFLVYEDVPEDSPIGTVKAREPLNSSEPIFYRISSGDLGGKFSIHRR 429

Query: 95  -GDISLMQCLDYETEDSYRFTVYAT--DTLMTTSATVNISVVNVNDWDPRFRYPQYELFL 151
            G I   + LD+ET+     TV A        +S  VNI+V++VND  P F     E+ +
Sbjct: 430 LGTIRTRKPLDHETQPVVVLTVQAQLGSAPACSSTEVNITVMDVNDNHPAFLRTSDEIRI 489

Query: 152 PHIPLADLTPGSVIGKVEAADGDKGDR--VTLSLRGPYEKMFSINDSGHISIVD--LSAL 207
                    PG+ +    A D D G    +  S+  P   +F+I+ +  +  ++  L A 
Sbjct: 490 SQT----TPPGTALYLARAEDRDSGRNGLIRYSIASPQPGVFAIDRALGVLFLNGSLGAG 545

Query: 208 NTSTIQLVVVATDTGNPPRQA 228
               + L + A D G  P+ A
Sbjct: 546 EQRELTLTLRAEDQGVHPQAA 566



 Score = 48.5 bits (114), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 57/209 (27%), Positives = 94/209 (44%), Gaps = 30/209 (14%)

Query: 56   ENLPVNYVLLTVTTNKP---RDLRVKY-WLSNDYGERFSISRQGDISLMQC-LDYETEDS 110
            E++ V  ++  +T + P   R+ +V Y  LS +    F +     +    C LDYE +  
Sbjct: 1175 EDVTVGSLVHHITAHDPDEGRNGKVTYSILSGNENMTFMLDESSGLLTTTCPLDYEMKTQ 1234

Query: 111  YRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGK 167
            +  TV A D     +++S T+ ++V++VND  P F+   YE  +      +  PG  + +
Sbjct: 1235 HILTVLALDDGTPALSSSQTLTVTVLDVNDEAPVFKQHLYEASVKE----NQNPGEFVTR 1290

Query: 168  VEAADGDKGDRVTLSLR---GPYEKMFSIN-DSGHI---SIVDLSALNTSTIQLVVVATD 220
            VEA D D G    L      G   + F IN D+G +   +I+D       T++++V    
Sbjct: 1291 VEALDRDSGVNSKLQFEIMPGASFESFEINSDTGEVVTTTILDREIQEVFTLRVLV---R 1347

Query: 221  TGNPPRQASVPAIM--------HFPEAIV 241
             G  P  +S   I+        H PE IV
Sbjct: 1348 DGGFPSLSSTTTILCTVEDENDHAPEFIV 1376



 Score = 45.4 bits (106), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 43/148 (29%), Positives = 77/148 (52%), Gaps = 11/148 (7%)

Query: 86   GERFSISRQ-GDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRY 144
            G +F+I +  G + L++ LD+E    Y   +  +D++  T   + + V++VND  P F  
Sbjct: 1935 GTKFAIDQNTGVVVLVKTLDFEEMTEYELLIQISDSVHHTEGALVVRVLDVNDNPPVFSQ 1994

Query: 145  PQYELFLPH-IPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSIN-DSGHI-SI 201
              Y++ +P  IP+     G  +  + A D +  + ++  +     K FSI+  +G I +I
Sbjct: 1995 DFYQVTVPESIPV-----GYSVLTLSATDLESNENISYRILSS-SKEFSIDPKNGTIFTI 2048

Query: 202  VDLSALNT-STIQLVVVATDTGNPPRQA 228
              +  L+T ST Q +V A+D GNP  +A
Sbjct: 2049 SPVLLLDTISTTQFLVEASDGGNPDLRA 2076



 Score = 40.8 bits (94), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 39/148 (26%), Positives = 67/148 (45%), Gaps = 19/148 (12%)

Query: 56   ENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTV 115
            EN  V Y +  ++ N   +  V+   +N +   +   + G + L+  LD E   S+   +
Sbjct: 2126 ENTYVEYSI--ISGNSQNNFHVQ---TNFFHSEYPYKQVGYLVLLHSLDREASASHELVI 2180

Query: 116  YATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTP-GSVIGKVEAA 171
             A+D+    ++++A ++I V++VND  P F    Y     H  + + TP GS I  V A 
Sbjct: 2181 LASDSGCPPLSSTAVISIQVLDVNDNPPNFSSLSY-----HTHVKESTPLGSHITVVSAN 2235

Query: 172  DGDKGDRVTLSLRGPYEKMFSINDSGHI 199
            D D G    +        + S N+ GH 
Sbjct: 2236 DRDTGSHAEIIY-----NIISGNEKGHF 2258



 Score = 39.7 bits (91), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 33/93 (35%), Positives = 44/93 (47%), Gaps = 8/93 (8%)

Query: 49  EYSVSALENLPVNYVLLTVTTNKP---RDLRVKYWLSN-DYGERFSI-SRQGDISLMQCL 103
           E  V  LE  PVN ++ TV    P    +  V Y +S+ D  + F I +  G+I     L
Sbjct: 847 ELHVKVLEGQPVNMLVTTVFAKDPDEGNNAEVTYSVSSADSSDHFKIDANSGEIRTTTIL 906

Query: 104 DYETEDSYRFTVYATDT---LMTTSATVNISVV 133
            Y+   SYR TV ATD     +   A VNI V+
Sbjct: 907 SYDYRPSYRMTVIATDQGVPPLQGQAVVNIQVI 939



 Score = 39.7 bits (91), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 51/198 (25%), Positives = 85/198 (42%), Gaps = 16/198 (8%)

Query: 50   YSVSALENLPVNYVLLTVTT-NKPRDL--RVKYWLSNDYGERFSIS-RQGDISLMQCLDY 105
            Y  S  E+  V  V+L ++  +K   L  + +Y+L+++    F+I    G +     LD 
Sbjct: 1483 YQSSVREDAEVGTVVLVLSAVDKDEGLNGQTEYFLTDEASGAFTIDPMSGTLKTSNTLDR 1542

Query: 106  ETEDSYRFTVYATDTLM----TTSATVNISVVNVNDWDPRFRYPQYELFL-PHIPLADLT 160
            E    + F+  A D  +    +T+  + + + +VND  P      +++FL P  P    T
Sbjct: 1543 EARSQHTFSAVARDCSIQGSRSTTVIIKVYITDVNDNGPVLEQNPFDVFLSPQSPTKQTT 1602

Query: 161  PGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSIND-SGHISIVDLSALNTSTIQLVVVA 218
               VI  V A D D G   T+       + MFSI+  +G I      +     I L +  
Sbjct: 1603 ---VI--VRADDPDLGPNGTVVFSFAETQSMFSIDKYTGEIQFQQNPSSEYFPIWLQLKV 1657

Query: 219  TDTGNPPRQASVPAIMHF 236
            TD G P R  +   ++H 
Sbjct: 1658 TDQGIPARTTTGLLVIHM 1675



 Score = 39.7 bits (91), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 40/153 (26%), Positives = 72/153 (47%), Gaps = 14/153 (9%)

Query: 87   ERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRF 142
            E F I S  G++     LD E ++ +   V   D     ++++ T+  +V + ND  P F
Sbjct: 1315 ESFEINSDTGEVVTTTILDREIQEVFTLRVLVRDGGFPSLSSTTTILCTVEDENDHAPEF 1374

Query: 143  RYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIND-SGH 198
                Y++ +    L +  P  V+  V A+D D G+   +    + G  ++ F+IN+ SG 
Sbjct: 1375 IVSSYDIEV----LENQEP-EVVYTVLASDMDAGNNRAVEYHIIDGNTDEYFAINEMSGD 1429

Query: 199  ISIVD-LSALNTSTIQLVVVATDTGNPPRQASV 230
            +S    L     S   L ++ +D G+PPR + +
Sbjct: 1430 LSTTRALDREQVSNFTLAILCSDQGDPPRSSVI 1462



 Score = 39.3 bits (90), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 30/86 (34%), Positives = 40/86 (46%), Gaps = 8/86 (9%)

Query: 95  GDISLMQCLDYETEDSYRFTVYA----TDTLMTTSATVNISVVNVNDWDPRFRYPQYELF 150
           G I L +  DYE+  +Y F V+A       L   S TV + V + ND  P F +    L 
Sbjct: 641 GWIYLRRQFDYESTQTYNFRVFAWIPEDGFLQNVSTTVIVRVWDENDNSPTFLHDVLFLK 700

Query: 151 LPHIPLADLTPGSVIGKVEAADGDKG 176
           +   P+    P  VIGK+ A D D G
Sbjct: 701 VEESPV----PQGVIGKITAIDMDSG 722



 Score = 37.7 bits (86), Expect = 8.8,   Method: Compositional matrix adjust.
 Identities = 37/140 (26%), Positives = 61/140 (43%), Gaps = 13/140 (9%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRD----LRVKYWL--SNDYGERFSISRQGDIS 98
            FS   Y     E+ P+   +  V+ N  RD      + Y +   N+ G  +     G + 
Sbjct: 2210 FSSLSYHTHVKESTPLGSHITVVSAND-RDTGSHAEIIYNIISGNEKGHFYLEENTGVLY 2268

Query: 99   LMQCLDYETEDSYRFTVYATDTLMT--TSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
            L++ LDYE    +  TV A+D      + A V ++V++ ND  P+F +  +   +P    
Sbjct: 2269 LIKPLDYEEMTKFTLTVQASDAEKKHFSFAVVFVNVLDDNDHAPQFMFSSFSCIVPE--- 2325

Query: 157  ADLTPGSVIGKVEAADGDKG 176
             +L   S I  + A D D G
Sbjct: 2326 -NLPISSTICSINALDFDAG 2344


>gi|340372651|ref|XP_003384857.1| PREDICTED: protocadherin Fat 4-like [Amphimedon queenslandica]
          Length = 5831

 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/170 (30%), Positives = 82/170 (48%), Gaps = 21/170 (12%)

Query: 76   RVKYWLSNDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYAT--------DTLMTTSA 126
            R+ + L +D+ ++F I S  GDISL+  LDYET  SY   V A         D  M  + 
Sbjct: 2702 RITFSLIDDFDDQFFINSETGDISLLLPLDYETVSSYALQVLAIDGSDDSLHDNRMNDTM 2761

Query: 127  TVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR-- 184
            TVN++V  +N+  P    P Y  ++    L +      + ++   D D G   +LS    
Sbjct: 2762 TVNVTVTGINEHTPVCSQPVYSAYINRTSLNE------VFRLNCFDSDLGVDGSLSYSIV 2815

Query: 185  --GPYEKMFSINDSGHISIVDLSALNTS-TIQLVVVA-TDTGNPPRQASV 230
              G Y  +F I   G +++  + A N S T+ ++++A TD G P R + +
Sbjct: 2816 DAGGYSSLFDITSVGAVTLPAVIAPNASVTVYVLMIAITDGGQPSRSSQI 2865



 Score = 55.8 bits (133), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 52/155 (33%), Positives = 76/155 (49%), Gaps = 14/155 (9%)

Query: 89   FSISRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYP 145
            FSIS  G +SL   LDYET  S+  TV  +D     +T S+ V I+V  +N+  P F   
Sbjct: 4266 FSISSSGYLSLQSSLDYETVQSHNITVVCSDQGSPSLTDSSIVLITVSPINEHRPMFDSS 4325

Query: 146  QYELFLPH-IPLADLTPGSVIGKVEAA---DGDKGDRVTLSLRGPYEKMFSIN-DSGHIS 200
             Y   +    PL+      VIG V A+   DG+ G+    +  G  +  F +  DSG+IS
Sbjct: 4326 TYNFSVSEKAPLS-----QVIGFVSASDEDDGNNGEFYYTNYGGSGDSYFLVGFDSGNIS 4380

Query: 201  IVD-LSALNTSTIQLVVVATDTGNPPRQASVPAIM 234
            + + L+A  +  + L V A D G P    SV  ++
Sbjct: 4381 VTNFLNASESDELTLAVAAIDYGPPSPLLSVATVV 4415



 Score = 55.1 bits (131), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 60/231 (25%), Positives = 101/231 (43%), Gaps = 20/231 (8%)

Query: 14   VVRAIQYD--NQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNK 71
            V+  + YD    D  +   L +     +L    F  + Y  S  EN P+   + TV    
Sbjct: 3464 VIPVLCYDVAEPDDTSKGILTIETVFVNLYNPTFEFSSYQTSLPENTPLQSPVTTVRATD 3523

Query: 72   P---RDLRVKYWLSNDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDTLMTTSA- 126
                 +  + Y +      +F I S+ G IS++  LD E+ DSY  T+ ATD  ++ +A 
Sbjct: 3524 DDIGTNGEITYSIVGGNPNKFYIDSQSGVISVLTSLDRESVDSYSITIQATDGGISGNAT 3583

Query: 127  -------TVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRV 179
                   T+N++V+++ND  PR     Y  F+      + +  S + +VE +DGD  +  
Sbjct: 3584 NSNSANTTLNVTVLDINDNAPRLSQLAYVQFI----YTNHSLLSTVLQVECSDGDLSENG 3639

Query: 180  TLSLR-GPYEKMFSINDSGHISIVDLSALNTSTIQLVVVATDTGNPPRQAS 229
            T+S    P    FSIN  G + ++    +  +     V+ TD    P  +S
Sbjct: 3640 TISYSIDPAHDSFSINSEGSV-LLTSEQMEQTVHSFNVLCTDMSTAPLSSS 3689



 Score = 52.0 bits (123), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 35/111 (31%), Positives = 56/111 (50%), Gaps = 9/111 (8%)

Query: 89   FSISRQGDISLMQCLDYETEDSYRFTVYATDTLMT---TSATVNISVVNVNDWDPRFRYP 145
            F     G IS+   LD+E+E SY  TV  +D+  +      TV I++ +V+++ P F+  
Sbjct: 1772 FQALSNGRISVNNTLDFESESSYILTVRCSDSSQSPRVVDVTVIINIDDVSEFGPVFQMS 1831

Query: 146  QYELFLPHIPLADLTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSIN 194
             YE F+    L    PG+V+G+  A D D G    +T +L    +  F I+
Sbjct: 1832 SYEFFVNETAL----PGTVVGRAVAVDQDTGSAGEITYTLTNSSDVPFGIS 1878



 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 43/106 (40%), Positives = 53/106 (50%), Gaps = 11/106 (10%)

Query: 88  RFSISRQ-GDISLMQCLDYETEDSYRFTVYATDTL-MTTSATVNISVVNVNDWDPRFRYP 145
           RFS++ Q G +SL   LDYETE    FTV   DT     +A   ISVV VND  P F   
Sbjct: 524 RFSLNSQTGQLSLSSPLDYETEQVITFTVVCYDTANYNDTAIARISVVPVNDEVPYFPTE 583

Query: 146 QYELFLPHIPLADLTPGS--VIGKVEAADGD--KGDRVTLSLRGPY 187
            Y       P++  TP +  VIG+V A D D   G  +T S+   Y
Sbjct: 584 NYTF-----PVSRTTPTNFFVIGQVNAMDDDLGYGSNLTYSMESEY 624



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 47/139 (33%), Positives = 66/139 (47%), Gaps = 12/139 (8%)

Query: 92   SRQGDISLMQCLDYETEDSYRFTVYATDTLM---TTSATVNISVVNVNDWDPRFRYPQYE 148
            S  G ISL+  LDYET+ SY   V ATD+     T    VNI V NVND  P F      
Sbjct: 1451 SSSGVISLISKLDYETQQSYALIVQATDSGTPPNTGQVAVNIFVENVNDMSPVFTNATSS 1510

Query: 149  LFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSL-RGPYEKMFSINDSGH--ISIVD 203
            + +       L     +G+ E  DGD G    VT ++  G    +FSI+++G   + + +
Sbjct: 1511 VSINEGQEYSLP----VGQFECTDGDFGPFGEVTYNITSGNSNGLFSIDETGGQLLLMGE 1566

Query: 204  LSALNTSTIQLVVVATDTG 222
            +    T ++ L V  TD G
Sbjct: 1567 VDYETTQSLTLQVTCTDGG 1585



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 56/201 (27%), Positives = 88/201 (43%), Gaps = 27/201 (13%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDLR---VKYWL---SNDYGERFSI-SRQGDI 97
            FS   YS +  E LP+N ++ TV+      +    + Y +   SN  G RF+I +  G I
Sbjct: 2043 FSNTPYSHTITEGLPLNSLIFTVSATDSDIMSYNAITYGIVAASNPDG-RFTIDTTSGAI 2101

Query: 98   SLMQCLDYETEDSYRFTVYATDTL----------MTTSATVNISVVNVNDWDPRFRYPQY 147
              +Q +DYE +  Y   + AT+ +          + +   +++++ + ND  P    P  
Sbjct: 2102 RNIQDIDYEEQTFYSLNISATNVIPVSDNSGSQSLASYEILSLTINDTNDNSPIITPPAA 2161

Query: 148  ELFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDSGHISIVDLS 205
               +      D  PG+ +  V   D D G     TLSL G     F +  +G I I    
Sbjct: 2162 SALI----TVDDPPGTFVITVSCTDADSGAYGNTTLSLSGSNAGNFELLANGTI-ITAAE 2216

Query: 206  ALNTSTIQLVVVATDTGNPPR 226
             L+T    L+V  TD G+PPR
Sbjct: 2217 ILDTQI--LLVNCTDMGSPPR 2235



 Score = 48.5 bits (114), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 47/148 (31%), Positives = 70/148 (47%), Gaps = 11/148 (7%)

Query: 94  QGDISLMQCLDYETEDSYRFTVYA---TDTLMTTSATVNISVVNVNDWDPRFRYPQYELF 150
           +G + +   LD ET  SY  TV A   TDT    SA + + V +VND DP        L 
Sbjct: 841 EGSVLVNSILDRETYISYTMTVVAEVITDTSKNDSAELFVYVRDVNDNDPFCTSSSDTLQ 900

Query: 151 LPHIPLADLTPGSVIGKVEAADGDKGDR--VTLSLRGPYEKMFSINDSGHISIVD-LSAL 207
           +    L     G+V+      D D G    +T SL   Y+ +F +N  G + + D L+A 
Sbjct: 901 I----LETTQKGAVLFDFNCTDSDVGQNANLTYSLYNNYD-IFEVNSEGVLYLSDHLNAS 955

Query: 208 NTSTIQLVVVATDTGNPPRQASVPAIMH 235
           N +T QL++  +D G  PR  +   I++
Sbjct: 956 NLTTFQLILTVSDQGFTPRSITFSTILN 983



 Score = 47.8 bits (112), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 56/225 (24%), Positives = 98/225 (43%), Gaps = 42/225 (18%)

Query: 25   RYALATLIVSKAGTSLRELQF---------------SKNEYSVSALENLPVNYVLLTVTT 69
            RY LA  +  +A  S   + F               S++ Y+ +  E+  +N  +LTV+ 
Sbjct: 2531 RYDLAIRVTDRAQISRSSIDFVNVSLTDINDNAPSPSQSIYTQAINEDTAINATVLTVSC 2590

Query: 70   NKPR---DLRVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDT---LMT 123
            +      +  + Y +S+D    F+I   G IS+   L +   D        +D     ++
Sbjct: 2591 DDDDIGDNAVIDYTISDD-NNLFNIDTSGVISVNSNLRFRPRDVLALQAICSDRGQPTLS 2649

Query: 124  TSATVNISVVNVNDWDPRFRYPQYELFLPH-----IPLADLTPGSVIGKVEAADGDKG-- 176
            TS  V ISV ++ND+ P F      + LP      +P           KV A+D D G  
Sbjct: 2650 TSVPVTISVSSINDYPPVFNVSLASVTLPENTSIAVPFI---------KVNASDNDIGLN 2700

Query: 177  DRVTLSLRGPYEKMFSIN-DSGHISI---VDLSALNTSTIQLVVV 217
             R+T SL   ++  F IN ++G IS+   +D   +++  +Q++ +
Sbjct: 2701 GRITFSLIDDFDDQFFINSETGDISLLLPLDYETVSSYALQVLAI 2745



 Score = 45.4 bits (106), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 52/211 (24%), Positives = 89/211 (42%), Gaps = 30/211 (14%)

Query: 16   RAIQYDNQDRYALATLIVSKAG-----TSLRELQFSKNEYS---------VSALENLPVN 61
            RA+ Y+    Y L  + VS  G      ++R     KNE+S         V+ +EN  + 
Sbjct: 1157 RALDYELAQSYEL-IVRVSDGGDRSIDVTVRITVSPKNEHSPVIHNGPFNVTLVENTDIG 1215

Query: 62   YVLLTVT---TNKPRDLRVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYAT 118
            + +  V     ++  D  ++Y LS      F I+  G++ +   +D E + SY F++   
Sbjct: 1216 HTVFVVNGTDEDQGDDGSLEYSLSPQQ-TAFGITNGGELIVTGVIDREKKSSYSFSIIVR 1274

Query: 119  DT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDK 175
            D+   +M+ S T +IS+ + +D  P F      L++  +       G  +      D D+
Sbjct: 1275 DSGSSVMSASTTASISISDQDDSPPTFT---QSLYVESVSSESAEVGDTVASTRCTDPDQ 1331

Query: 176  GDRVTL-----SLRGPYEKMFSINDSGHISI 201
            GD   L     S        FSIN +G + I
Sbjct: 1332 GDNADLTYSIISTGSHSSSYFSINTNGDVVI 1362



 Score = 45.4 bits (106), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 40/122 (32%), Positives = 64/122 (52%), Gaps = 8/122 (6%)

Query: 27   ALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVT-TNKPRDLRVKYWLSN-D 84
            AL T++VSK         F+ N YSVS  E+  +    LTV+ T+    + + Y +SN +
Sbjct: 3690 ALVTIVVSK--DQFEAPTFTNNSYSVSIPEDQGMLEPFLTVSATSNESGVSIVYSISNGN 3747

Query: 85   YGERFSIS-RQGDISLMQCLDYETEDSYRFTVYATDTLM---TTSATVNISVVNVNDWDP 140
             G  F I    G+IS++  LDY   + Y  T+ A+ +     ++ ATV +S+ +VN+  P
Sbjct: 3748 EGTAFFIDPSSGNISVISTLDYLQNNLYTLTIRASTSGFVQYSSYATVTVSITDVNNNQP 3807

Query: 141  RF 142
             F
Sbjct: 3808 YF 3809



 Score = 43.5 bits (101), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 45/159 (28%), Positives = 70/159 (44%), Gaps = 12/159 (7%)

Query: 89   FSISRQG-DISLMQCLDYETEDSYRFTVYATD---------TLMTTSATVNISVVNVNDW 138
            F+IS  G D++L++ LDYET  SY  TV A D         T++ ++ TV+I V + ND 
Sbjct: 1659 FAISSTGGDLTLIKELDYETRQSYTLTVQADDSGGASNPTYTVLNSTLTVDIIVTDANDN 1718

Query: 139  DPRFRYPQYELFLPHIPL-ADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSG 197
             P F    Y   +    L  D      +   +   G  G+     + G     F    +G
Sbjct: 1719 TPTFSKSVYVGSISESALKGDYVSMDPLNCTDRDSGVNGETTLTIINGNDNYAFQALSNG 1778

Query: 198  HISIVD-LSALNTSTIQLVVVATDTGNPPRQASVPAIMH 235
             IS+ + L   + S+  L V  +D+   PR   V  I++
Sbjct: 1779 RISVNNTLDFESESSYILTVRCSDSSQSPRVVDVTVIIN 1817



 Score = 42.4 bits (98), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 50/166 (30%), Positives = 71/166 (42%), Gaps = 19/166 (11%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGER-FSIS-RQGDISLMQC 102
            F    Y +S  E++ +N  LL +T   P    + Y L+   G   F I    G + L+  
Sbjct: 4536 FDSAVYGLSINEDIEINSQLLNITATDPEGDDIVYTLTGGTGLGTFGIDPSTGILRLLLK 4595

Query: 103  LDYETEDSYRFTVYATDT----LMTTSATVNISVVNVNDWDPRFR---YPQYELFLPHIP 155
            LDYET   Y  TV A+DT     M+ + TV+I + NVND  P      Y   ++   H  
Sbjct: 4596 LDYETTSFYLLTVTASDTDSLNPMSANVTVSIVIANVNDHPPVLSPSTYTTTQMEGNHTS 4655

Query: 156  LADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSGHISI 201
            L+       I      D D G   T SL       F+IN +G ++ 
Sbjct: 4656 LS-------IQSYTCTDADGG---TTSLSVSPAPPFAINSNGDVTF 4691



 Score = 40.0 bits (92), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 42/89 (47%), Gaps = 5/89 (5%)

Query: 89   FSISRQGDISLMQCLDYETEDSYRFTVYATDTLMT-TSATVNISVVNVNDWDPRFRYPQY 147
            F+I+ +G +     LDYE+   Y  TV+ +D   T   A V +SV+ VN++ P F    Y
Sbjct: 3859 FNITSEGQVITTGPLDYESVTVYTLTVHCSDGGSTPAEAIVQVSVLPVNEFKPVFEMSSY 3918

Query: 148  ELFLPHIPLADLTPGSVIGKVEAADGDKG 176
               +          GS IG V A D D G
Sbjct: 3919 SFSISESESV----GSTIGNVSATDADGG 3943



 Score = 38.1 bits (87), Expect = 7.4,   Method: Compositional matrix adjust.
 Identities = 47/187 (25%), Positives = 80/187 (42%), Gaps = 17/187 (9%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLS--NDYGERFSISRQGDISLMQC 102
            F+   Y     E+   N +   ++     D  + Y ++  N+ G  +     G +SL   
Sbjct: 3299 FNSTSYEWEVREDASTNTMFTEISAESQDDTDLTYSITDGNNDGVFYINPLTGVVSLATS 3358

Query: 103  LDYETEDSYRFTVYATDTLMTTSAT-VNISVVNVNDWDPRFRYPQYELFLPHIPLADLTP 161
            LDYE   SY   V A D     S+T + ++V+NVND  P      Y     + P+     
Sbjct: 3359 LDYEETVSYGLVVKAVDESNRESSTFLLVTVINVNDESPLVSPTAYMTVEQNRPI----- 3413

Query: 162  GSVIGKVEAADGDKGDRVTLSLRGPYEK-MFSINDSG--HISIVDLSALNTSTIQLV-VV 217
            G  IG +  +D D  + +  +    Y    F+I+D+G  H+S     AL+ + + ++ V+
Sbjct: 3414 GYPIGTISCSDSDSIE-IMYAFASTYTAGTFNISDNGIVHVS----GALDDTPVHVIPVL 3468

Query: 218  ATDTGNP 224
              D   P
Sbjct: 3469 CYDVAEP 3475


>gi|119625352|gb|EAX04947.1| dachsous 2 (Drosophila), isoform CRA_e [Homo sapiens]
          Length = 2666

 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 78/301 (25%), Positives = 132/301 (43%), Gaps = 33/301 (10%)

Query: 11   ITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVN--------- 61
             TL V+A   + +  ++ A + VS    +    QF  + +S    ENLP++         
Sbjct: 2031 FTLTVQASDAEKK-HFSFAVVFVSVLDDNDHAPQFMFSSFSCIVPENLPISSTICSINAL 2089

Query: 62   ------YVLLTVTTNKPRDLRVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTV 115
                  Y  LT +   P    + + +S D+         GDI   Q LDYE  + Y  TV
Sbjct: 2090 DFDAGPYGELTYSIVSP--CFLTHGMSYDHDLFLIDPLTGDIHAKQILDYENGNKYCLTV 2147

Query: 116  YATDTL-MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGD 174
             A D    T S  V + +  +++++P F   QY   LP           +IG+VEA+D D
Sbjct: 2148 QAKDKGDATASLVVWVDIEGIDEFEPIFTQDQYFFTLPE----KNKDRQLIGRVEASDAD 2203

Query: 175  KG-DRVTLSLRGPYEKMFSINDS-GHISIVDL-----SALNTS-TIQLVVVATDTGNPPR 226
             G D V L   G     FS+N + G+I ++       S LN   T+++ ++A    +  +
Sbjct: 2204 AGIDGVILYSLGTSSPFFSVNKTNGNIYLIRALPLIKSQLNKEDTLEMKIIAHSPKSDSK 2263

Query: 227  QASVPAIMHFPEAIVQQASSKLNSGTSSTVLIILGVVLIVLGFVIILLILYIHKNKHTKN 286
             AS    ++   +      +   S  S ++++   V LI++  +I++++   HK K T N
Sbjct: 2264 FASCTVFVNVSFSSEGTPLAVFASSFSISLVVSFLVFLILICILIVMILR--HKQKDTIN 2321

Query: 287  N 287
            N
Sbjct: 2322 N 2322



 Score = 51.6 bits (122), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 55/201 (27%), Positives = 93/201 (46%), Gaps = 14/201 (6%)

Query: 38  TSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLR--VKYWLSN-DYGERFSIS-R 93
           T+L   +F + +Y+    E++P +  + TV   +P +    + Y +S+ D G +FSI  R
Sbjct: 164 TTLAPAEFERPKYTFLVYEDVPEDSPIGTVKAREPLNSSEPIFYRISSGDLGGKFSIHPR 223

Query: 94  QGDISLMQCLDYETEDSYRFTVYAT--DTLMTTSATVNISVVNVNDWDPRFRYPQYELFL 151
            G I   + LD+ET+     TV A        +S  VNI+V++VND  P F     E+ +
Sbjct: 224 LGTIRTRKPLDHETQPVVVLTVQAQLGSAPACSSTEVNITVMDVNDNHPAFLRTSDEIRI 283

Query: 152 PHIPLADLTPGSVIGKVEAADGDKGDR--VTLSLRGPYEKMFSINDSGHISIVD--LSAL 207
                    PG+ +    A D D G    +  S+  P   +F+I+ +  +  ++  L A 
Sbjct: 284 SQT----TPPGTALYLARAEDRDSGRNGLIRYSIASPQPGVFAIDRALGVLFLNGSLGAG 339

Query: 208 NTSTIQLVVVATDTGNPPRQA 228
               + L + A D G  P+ A
Sbjct: 340 EQRELTLTLRAEDQGVHPQAA 360



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 57/209 (27%), Positives = 95/209 (45%), Gaps = 30/209 (14%)

Query: 56   ENLPVNYVLLTVTTNKP---RDLRVKY-WLSNDYGERFSISRQGDISLMQC-LDYETEDS 110
            E++ V  ++  +T + P   R+ +V Y  LS +    F +     +    C LDYE +  
Sbjct: 925  EDVTVGSLVHHITAHDPDEGRNGKVTYSILSGNENMTFMLDESSGLLTTTCPLDYEMKTQ 984

Query: 111  YRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGK 167
            +  TV A D     +++S T+ ++V++VND  P F+   YE  +      +  PG  + +
Sbjct: 985  HILTVLALDDGTPALSSSQTLTVTVLDVNDEAPVFKQHLYEASVKE----NQNPGEFVTR 1040

Query: 168  VEAADGDKGDRVTLSLR---GPYEKMFSIN-DSGHI---SIVDLSALNTSTIQLVVVATD 220
            VEA D D G    L      G   ++F IN D+G +   +I+D       T++++V    
Sbjct: 1041 VEALDRDSGVNSKLQFEIMPGASFELFEINSDTGEVVTTTILDREIQEVFTLRVLV---R 1097

Query: 221  TGNPPRQASVPAIM--------HFPEAIV 241
             G  P  +S   I+        H PE IV
Sbjct: 1098 DGGFPSLSSTTTILCTVEDENDHAPEFIV 1126



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 46/144 (31%), Positives = 66/144 (45%), Gaps = 13/144 (9%)

Query: 95  GDISLMQCLDYETEDSYRFTVYA----TDTLMTTSATVNISVVNVNDWDPRFRYPQYELF 150
           G I L +  DYE+  +Y F V+A       L   S TV + V + ND  P F +    L 
Sbjct: 435 GWIYLRRQFDYESTQTYNFRVFAWIPEDGFLQNVSTTVIVRVWDENDNSPTFLHDVLFLK 494

Query: 151 LPHIPLADLTPGSVIGKVEAADGDKGDRVTLSL----RGPYEKMFSINDSGHISIVDLSA 206
           +   P+    P  VIGK+ A D D G    L       G + KM + N    I+ V L  
Sbjct: 495 VEESPV----PQGVIGKITAIDMDSGKNGQLLYFLLSDGKFFKM-NPNTGELINWVALDR 549

Query: 207 LNTSTIQLVVVATDTGNPPRQASV 230
            +    ++ V+ TD G+PPR A++
Sbjct: 550 EHRGHHEMTVLVTDRGSPPRNATM 573



 Score = 45.4 bits (106), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 43/148 (29%), Positives = 77/148 (52%), Gaps = 11/148 (7%)

Query: 86   GERFSISRQ-GDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRY 144
            G +F+I +  G + L++ LD+E    Y   +  +D++  T   + + V++VND  P F  
Sbjct: 1685 GTKFAIDQNTGVVVLVKTLDFEEMTEYELLIQISDSVHYTEGALVVRVLDVNDNPPVFSQ 1744

Query: 145  PQYELFLPH-IPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSIN-DSGHI-SI 201
              Y++ +P  IP+     G  +  + A D +  + ++  +     K FSI+  +G I +I
Sbjct: 1745 DFYQVTVPESIPV-----GYSVLTLSATDLESNENISYRILSS-SKEFSIDPKNGTIFTI 1798

Query: 202  VDLSALNT-STIQLVVVATDTGNPPRQA 228
              +  L+T ST Q +V A+D GNP  +A
Sbjct: 1799 SPVLLLDTISTTQFLVEASDGGNPDLRA 1826



 Score = 41.6 bits (96), Expect = 0.60,   Method: Compositional matrix adjust.
 Identities = 53/198 (26%), Positives = 86/198 (43%), Gaps = 16/198 (8%)

Query: 50   YSVSALENLPVNYVLLTVTT-NKPRDL--RVKYWLSNDYGERFSIS-RQGDISLMQCLDY 105
            Y  S  E+  V  V+L ++  +K   L  + +Y+L+++    F+I    G +     LD 
Sbjct: 1233 YQSSVREDAEVGTVVLVLSAVDKDEGLNGQTEYFLTDEASGAFTIDPMSGTLKTSNTLDR 1292

Query: 106  ETEDSYRFTVYATDTLM----TTSATVNISVVNVNDWDPRFRYPQYELFL-PHIPLADLT 160
            E    + F+  A D  +    +T+  + + V +VND DP      +++FL P  P    T
Sbjct: 1293 EARSQHTFSAVARDCSIQGSRSTTVIIKVYVTDVNDNDPVLEQNPFDVFLSPESPTNQTT 1352

Query: 161  PGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSIND-SGHISIVDLSALNTSTIQLVVVA 218
               VI  V A D D G   T+       + MFSI+  +G I      +     I L +  
Sbjct: 1353 ---VI--VRADDLDLGPNGTVVFSFAETQSMFSIDKYTGEIQFQQNPSSEYFPIWLQLKV 1407

Query: 219  TDTGNPPRQASVPAIMHF 236
            TD G P R  +   ++H 
Sbjct: 1408 TDQGIPARTTTGLLVIHM 1425



 Score = 41.2 bits (95), Expect = 0.80,   Method: Compositional matrix adjust.
 Identities = 48/199 (24%), Positives = 87/199 (43%), Gaps = 18/199 (9%)

Query: 45   FSKNEYSVSALENL-PVNYVLLTVTTNKPRDLRVKYWLSNDYGERFSI----SRQGDISL 99
            F ++ Y  S  EN  P  +V      ++   +  K       G  F +    S  G++  
Sbjct: 1019 FKQHLYEASVKENQNPGEFVTRVEALDRDSGVNSKLQFEIMPGASFELFEINSDTGEVVT 1078

Query: 100  MQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
               LD E ++ +   V   D     ++++ T+  +V + ND  P F    Y++ +    L
Sbjct: 1079 TTILDREIQEVFTLRVLVRDGGFPSLSSTTTILCTVEDENDHAPEFIVSSYDIEV----L 1134

Query: 157  ADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIND-SGHISIVD-LSALNTST 211
             +  P  V+  V A+D D G+   +    + G  ++ F+IN+ SG +S    L     S 
Sbjct: 1135 ENQEP-EVVYTVLASDMDAGNNRAVEYHIIDGNTDECFTINEMSGELSTTRALDREQISN 1193

Query: 212  IQLVVVATDTGNPPRQASV 230
              LV++ +D G+PPR + +
Sbjct: 1194 FTLVILCSDLGDPPRSSVI 1212



 Score = 41.2 bits (95), Expect = 0.96,   Method: Compositional matrix adjust.
 Identities = 38/148 (25%), Positives = 66/148 (44%), Gaps = 19/148 (12%)

Query: 56   ENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTV 115
            EN  V Y +++  +     +  K++ S      +   + G + L+  LD E   S+   +
Sbjct: 1876 ENTYVEYSIISGNSQNNFHVETKFFHS-----EYPYKQVGYLVLLHSLDREASASHELVI 1930

Query: 116  YATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTP-GSVIGKVEAA 171
             A+D+    ++++A ++I V++VND  P F    Y     H  + + TP GS I  V A 
Sbjct: 1931 LASDSGCPPLSSTAVISIQVLDVNDNPPNFSSLSY-----HTHVKESTPLGSHITVVSAN 1985

Query: 172  DGDKGDRVTLSLRGPYEKMFSINDSGHI 199
            D D G    +        + S N+ GH 
Sbjct: 1986 DRDTGSHAEI-----IYNIISGNEKGHF 2008



 Score = 39.7 bits (91), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 38/140 (27%), Positives = 61/140 (43%), Gaps = 13/140 (9%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRD----LRVKYWL--SNDYGERFSISRQGDIS 98
            FS   Y     E+ P+   +  V+ N  RD      + Y +   N+ G  +     G + 
Sbjct: 1960 FSSLSYHTHVKESTPLGSHITVVSAND-RDTGSHAEIIYNIISGNEKGHFYLEENTGVLY 2018

Query: 99   LMQCLDYETEDSYRFTVYATDTLMT--TSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
            L++ LDYE    +  TV A+D      + A V +SV++ ND  P+F +  +   +P    
Sbjct: 2019 LIKPLDYEKMTKFTLTVQASDAEKKHFSFAVVFVSVLDDNDHAPQFMFSSFSCIVPE--- 2075

Query: 157  ADLTPGSVIGKVEAADGDKG 176
             +L   S I  + A D D G
Sbjct: 2076 -NLPISSTICSINALDFDAG 2094



 Score = 38.9 bits (89), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 59/132 (44%), Gaps = 12/132 (9%)

Query: 49  EYSVSALENLPVNYVLLTVTTNKP---RDLRVKYWLSN-DYGERFSI-SRQGDISLMQCL 103
           E  V  LE  PVN ++ TV    P    +  V Y +S+ D  + F I +  G+I     L
Sbjct: 597 ELHVKVLEGQPVNMLVTTVFAKDPDEGNNAEVTYSVSSEDSSDHFKIDANSGEIRTTTIL 656

Query: 104 DYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLT 160
            Y+   SYR +V ATD     +   A VNI V+ ++            L +P     +L 
Sbjct: 657 SYDYRPSYRMSVIATDQGVPPLQGQAVVNIQVIPLSKGRAIMSQNIRHLIIPE----NLK 712

Query: 161 PGSVIGKVEAAD 172
           P  ++  ++++D
Sbjct: 713 PTKIMSLIKSSD 724


>gi|218505783|ref|NP_001136239.1| protocadherin-15 isoform CD1-8 precursor [Homo sapiens]
          Length = 1915

 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 61/195 (31%), Positives = 100/195 (51%), Gaps = 14/195 (7%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGER-FSISRQ-GDISLMQ 101
           +F +  YS+   E + V  VLL +         + Y + N   +R F++S   G ++L +
Sbjct: 578 RFPQLMYSLEISEAMRVGAVLLNLQATDREGDSITYAIENGDPQRVFNLSETTGILTLGK 637

Query: 102 CLDYETEDSYRFTVYATDTL--MTTSATVNISVVNVNDWDPRFRYPQYELFLP-HIPLAD 158
            LD E+ D Y   + A+D     T++ATVNI V +VND  P F     + +LP ++ + +
Sbjct: 638 ALDRESTDRYILIITASDGRPDGTSTATVNIVVTDVNDNAPVF-----DPYLPRNLSVVE 692

Query: 159 LTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDSGHI-SIVDLSALNTSTIQLV 215
               + +G+V+A D D G   +V  SL G +  +F I  +G I + V L+       +LV
Sbjct: 693 EEANAFVGQVKATDPDAGINGQVHYSL-GNFNNLFRITSNGSIYTAVKLNREVRDYYELV 751

Query: 216 VVATDTGNPPRQASV 230
           VVATD    PR +++
Sbjct: 752 VVATDGAVHPRHSTL 766



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 62/241 (25%), Positives = 105/241 (43%), Gaps = 27/241 (11%)

Query: 6   DFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVN---- 61
           DF Q   LV++A Q +     A A L +     + +   F+   Y    LE+ PV     
Sbjct: 319 DFHQKFDLVIKAEQDNGHPLPAFAGLHIEILDENNQSPYFTMPSYQGYILESAPVGATIS 378

Query: 62  ----------YVLLTVTTNKPRDLRVKYWLSNDYGERFSISRQG---DISLMQCLDYETE 108
                      V L       +D  +  +L NDY   F++++ G    ++L+Q +D E +
Sbjct: 379 DSLNLTSPLRIVALDKDIEDTKDPELHLFL-NDYTSVFTVTQTGITRYLTLLQPVDREEQ 437

Query: 109 DSYRFTVYATDTLMTTSAT-VNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGK 167
            +Y F++ A D +  +    VNI V++ ND  P F    Y++++      D+ PG  + +
Sbjct: 438 QTYTFSITAFDGVQESEPVIVNIQVMDANDNTPTFPEISYDVYV----YTDMRPGDSVIQ 493

Query: 168 VEAADGDKGD--RVTLSLRGPYEKMFSIND-SGHISIV-DLSALNTSTIQLVVVATDTGN 223
           + A D D+G    +T  +    +  F IN  +G I+I   +  +   T  L V A D   
Sbjct: 494 LTAVDADEGSNGEITYEILVGAQGDFIINKTTGLITIAPGVEMIVGRTYALTVQAADNAP 553

Query: 224 P 224
           P
Sbjct: 554 P 554



 Score = 51.2 bits (121), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 71/233 (30%), Positives = 103/233 (44%), Gaps = 26/233 (11%)

Query: 13  LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKP 72
           LVV A       R++  TL +           F+ + Y+V   ENLP    +L +   K 
Sbjct: 750 LVVVATDGAVHPRHSTLTLAIKVLDIDDNSPVFTNSTYTVLVEENLPAGTTILQIEA-KD 808

Query: 73  RDL--RVKYWLSNDYGERFSISR--QGDISLMQCLDYET----EDSYRFTVYATD---TL 121
            DL   V Y + +   + F       G++SL++ LDYE     E S  F V A D   T+
Sbjct: 809 VDLGANVSYRIRSPEVKHFFALHPFTGELSLLRSLDYEAFPDQEASITFLVEAFDIYGTM 868

Query: 122 MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDK----GD 177
               ATV + V ++ND+ P F    Y+  +      D   G+ I  V A D D       
Sbjct: 869 PPGIATVTVIVKDMNDYPPVFSKRIYKGMV----APDAVKGTPITTVYAEDADPPGLPAS 924

Query: 178 RVTL---SLRGPY-EKMFSIN-DSGH-ISIVDLSALNTSTIQLVVVATDTGNP 224
           RV      ++ PY   +F +  DSG  I+ V+L+   T+  +LVVVA D G P
Sbjct: 925 RVRYRVDDVQFPYPASIFEVEEDSGRVITRVNLNEEPTTIFKLVVVAFDDGEP 977



 Score = 46.6 bits (109), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 56/119 (47%), Gaps = 8/119 (6%)

Query: 76  RVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDTLMT---TSATVNISV 132
           +V Y L N +   F I+  G I     L+ E  D Y   V ATD  +    ++ T+ I V
Sbjct: 714 QVHYSLGN-FNNLFRITSNGSIYTAVKLNREVRDYYELVVVATDGAVHPRHSTLTLAIKV 772

Query: 133 VNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMF 191
           ++++D  P F    Y + +      +L  G+ I ++EA D D G  V+  +R P  K F
Sbjct: 773 LDIDDNSPVFTNSTYTVLVEE----NLPAGTTILQIEAKDVDLGANVSYRIRSPEVKHF 827


>gi|284925136|ref|NP_001165405.1| cadherin-23 isoform 7 [Homo sapiens]
 gi|50254114|gb|AAT72166.1| cadherin 23 isoform B2 [Homo sapiens]
          Length = 1079

 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 59/195 (30%), Positives = 90/195 (46%), Gaps = 20/195 (10%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWLSNDYGERFSIS-RQGDISLM 100
           F +  Y  +  E++PV  ++LTVT           ++Y L  D   +F+I+   GDI ++
Sbjct: 162 FDQPSYQEAVFEDVPVGTIILTVTATDADSGNFALIEYSLG-DGESKFAINPTTGDIYVL 220

Query: 101 QCLDYETEDSYRFTVYATDT-------LMTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
             LD E +D Y  T  A D            S  V I V++VND  P+F  PQ+   +  
Sbjct: 221 SSLDREKKDHYILTALAKDNPGDVASNRRENSVQVVIQVLDVNDCRPQFSKPQFSTSV-- 278

Query: 154 IPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIN-DSGHISIVDLSALNTS 210
               +   G+ +  + A D D+G    +T SL GP  + F ++ DSG ++       +  
Sbjct: 279 --YENEPAGTSVITMMATDQDEGPNGELTYSLEGPGVEAFHVDMDSGLVT-TQRPLQSYE 335

Query: 211 TIQLVVVATDTGNPP 225
              L VVATD G PP
Sbjct: 336 KFSLTVVATDGGEPP 350



 Score = 39.3 bits (90), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 32/107 (29%), Positives = 49/107 (45%), Gaps = 8/107 (7%)

Query: 92  SRQGDISLMQCLDYETEDSYRFTVYATDTLMTTSAT---VNISVVNVNDWDPRFRYPQYE 148
           S  G +   + +DYE      FTV A+D      A    V + +V++ND +P F  P Y+
Sbjct: 109 SSAGKVIANRTVDYEEVHWLNFTVRASDNGSPPRAAEIPVYLEIVDINDNNPIFDQPSYQ 168

Query: 149 LFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSIN 194
             +      D+  G++I  V A D D G+   +    G  E  F+IN
Sbjct: 169 EAV----FEDVPVGTIILTVTATDADSGNFALIEYSLGDGESKFAIN 211



 Score = 38.9 bits (89), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 34/124 (27%), Positives = 56/124 (45%), Gaps = 21/124 (16%)

Query: 125 SATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLS 182
           +A + ++V++VND  P+F+      ++  I L   TPG+ +  V A D DKG    VT +
Sbjct: 36  NAKLTVNVLDVNDNTPQFKPFGITYYMERI-LEGATPGTTLIAVAAVDPDKGLNGLVTYT 94

Query: 183 LRGPYEKMFSINDSGHISIVDLSA-----------LNTSTIQLVVVATDTGNPPRQASVP 231
           L         +   G++ + D SA                +   V A+D G+PPR A +P
Sbjct: 95  L-------LDLVPPGYVQLEDSSAGKVIANRTVDYEEVHWLNFTVRASDNGSPPRAAEIP 147

Query: 232 AIMH 235
             + 
Sbjct: 148 VYLE 151


>gi|218505798|ref|NP_001136245.1| protocadherin-15 isoform CD1-10 precursor [Homo sapiens]
          Length = 1932

 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 61/195 (31%), Positives = 100/195 (51%), Gaps = 14/195 (7%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGER-FSISRQ-GDISLMQ 101
           +F +  YS+   E + V  VLL +         + Y + N   +R F++S   G ++L +
Sbjct: 593 RFPQLMYSLEISEAMRVGAVLLNLQATDREGDSITYAIENGDPQRVFNLSETTGILTLGK 652

Query: 102 CLDYETEDSYRFTVYATDTL--MTTSATVNISVVNVNDWDPRFRYPQYELFLP-HIPLAD 158
            LD E+ D Y   + A+D     T++ATVNI V +VND  P F     + +LP ++ + +
Sbjct: 653 ALDRESTDRYILIITASDGRPDGTSTATVNIVVTDVNDNAPVF-----DPYLPRNLSVVE 707

Query: 159 LTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDSGHI-SIVDLSALNTSTIQLV 215
               + +G+V+A D D G   +V  SL G +  +F I  +G I + V L+       +LV
Sbjct: 708 EEANAFVGQVKATDPDAGINGQVHYSL-GNFNNLFRITSNGSIYTAVKLNREVRDYYELV 766

Query: 216 VVATDTGNPPRQASV 230
           VVATD    PR +++
Sbjct: 767 VVATDGAVHPRHSTL 781



 Score = 55.5 bits (132), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 62/241 (25%), Positives = 105/241 (43%), Gaps = 27/241 (11%)

Query: 6   DFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVN---- 61
           DF Q   LV++A Q +     A A L +     + +   F+   Y    LE+ PV     
Sbjct: 334 DFHQKFDLVIKAEQDNGHPLPAFAGLHIEILDENNQSPYFTMPSYQGYILESAPVGATIS 393

Query: 62  ----------YVLLTVTTNKPRDLRVKYWLSNDYGERFSISRQG---DISLMQCLDYETE 108
                      V L       +D  +  +L NDY   F++++ G    ++L+Q +D E +
Sbjct: 394 DSLNLTSPLRIVALDKDIEDTKDPELHLFL-NDYTSVFTVTQTGITRYLTLLQPVDREEQ 452

Query: 109 DSYRFTVYATDTLMTTSAT-VNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGK 167
            +Y F++ A D +  +    VNI V++ ND  P F    Y++++      D+ PG  + +
Sbjct: 453 QTYTFSITAFDGVQESEPVIVNIQVMDANDNTPTFPEISYDVYV----YTDMRPGDSVIQ 508

Query: 168 VEAADGDKGD--RVTLSLRGPYEKMFSIND-SGHISIV-DLSALNTSTIQLVVVATDTGN 223
           + A D D+G    +T  +    +  F IN  +G I+I   +  +   T  L V A D   
Sbjct: 509 LTAVDADEGSNGEITYEILVGAQGDFIINKTTGLITIAPGVEMIVGRTYALTVQAADNAP 568

Query: 224 P 224
           P
Sbjct: 569 P 569



 Score = 51.2 bits (121), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 71/233 (30%), Positives = 103/233 (44%), Gaps = 26/233 (11%)

Query: 13  LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKP 72
           LVV A       R++  TL +           F+ + Y+V   ENLP    +L +   K 
Sbjct: 765 LVVVATDGAVHPRHSTLTLAIKVLDIDDNSPVFTNSTYTVLVEENLPAGTTILQIEA-KD 823

Query: 73  RDL--RVKYWLSNDYGERFSISR--QGDISLMQCLDYET----EDSYRFTVYATD---TL 121
            DL   V Y + +   + F       G++SL++ LDYE     E S  F V A D   T+
Sbjct: 824 VDLGANVSYRIRSPEVKHFFALHPFTGELSLLRSLDYEAFPDQEASITFLVEAFDIYGTM 883

Query: 122 MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDK----GD 177
               ATV + V ++ND+ P F    Y+  +      D   G+ I  V A D D       
Sbjct: 884 PPGIATVTVIVKDMNDYPPVFSKRIYKGMV----APDAVKGTPITTVYAEDADPPGLPAS 939

Query: 178 RVTL---SLRGPY-EKMFSIN-DSGH-ISIVDLSALNTSTIQLVVVATDTGNP 224
           RV      ++ PY   +F +  DSG  I+ V+L+   T+  +LVVVA D G P
Sbjct: 940 RVRYRVDDVQFPYPASIFEVEEDSGRVITRVNLNEEPTTIFKLVVVAFDDGEP 992



 Score = 46.6 bits (109), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 56/119 (47%), Gaps = 8/119 (6%)

Query: 76  RVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDTLMT---TSATVNISV 132
           +V Y L N +   F I+  G I     L+ E  D Y   V ATD  +    ++ T+ I V
Sbjct: 729 QVHYSLGN-FNNLFRITSNGSIYTAVKLNREVRDYYELVVVATDGAVHPRHSTLTLAIKV 787

Query: 133 VNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMF 191
           ++++D  P F    Y + +      +L  G+ I ++EA D D G  V+  +R P  K F
Sbjct: 788 LDIDDNSPVFTNSTYTVLVEE----NLPAGTTILQIEAKDVDLGANVSYRIRSPEVKHF 842


>gi|57529059|ref|NP_001009586.1| protocadherin 2 alpha a 15 [Danio rerio]
 gi|54013410|dbj|BAD60794.1| protocadherin1-alpha-av15-vCP [Danio rerio]
          Length = 939

 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 60/199 (30%), Positives = 98/199 (49%), Gaps = 23/199 (11%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGER----FSISR-QGD 96
           F K  YSV+  EN PV   +L V     ++ ++  V Y L +D  ++    F+++   G+
Sbjct: 244 FIKEVYSVTLNENTPVGTTILRVNATDLDEGQNGVVVYSLGHDVNDKLRKLFNVNPVTGE 303

Query: 97  ISLMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
           I +   LD+E +D Y   + A+D     +TT  +V I + +VND +P+         +P 
Sbjct: 304 IVVTGLLDFEVKDIYEIDIQASDKGIAPLTTDKSVTIKIADVNDNEPQIEVTSLSSTIPE 363

Query: 154 IPLADLTPGSVIGKVEAADGDKG--DRVTLSLRG--PYEKMFSINDSGHISIVDLSALNT 209
               D  PG+ +  +  +D D G   RVT SL    P++ M S  ++ + S+V  SAL+ 
Sbjct: 364 ----DSKPGTTVALISVSDLDSGINGRVTCSLSENIPFQLMPSSQENTY-SLVTTSALDR 418

Query: 210 STI---QLVVVATDTGNPP 225
            TI    + + A D G PP
Sbjct: 419 ETIAHYDITLEAKDAGQPP 437



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 61/263 (23%), Positives = 120/263 (45%), Gaps = 31/263 (11%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVT-----TNKPRDLRVKYWLSNDYGERFSI-----SR 93
           +FS + Y+   +EN      L +V+     T +   +  + W       +F+      S 
Sbjct: 457 EFSSSPYAFYVMENNAPGKSLFSVSASDKDTGENSAVSYQIWRDGGAENKFTSFININSE 516

Query: 94  QGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYP----Q 146
            G+I  ++  D+ET  +++F + ATD+    ++++ TVN+ +++ ND  P   YP     
Sbjct: 517 NGEIYALKSFDFETSKTFQFHILATDSGSPSLSSNVTVNVFILDQNDNVPVILYPVSANG 576

Query: 147 YELFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYE-KMFSIND-SGHI-SI 201
               +  IP  ++  G ++ KV A D D G    +  SL+   E  +F+++  +G I ++
Sbjct: 577 SAEGVEEIP-RNVNAGHLVTKVRAYDADIGYNGWLLFSLQEVSEHSLFALDRYTGQIRTL 635

Query: 202 VDLSALNTSTIQLVVVATDTGNPPRQASVPAIMHFPEAIVQQASSKLNSGTSST------ 255
              +  + +  +LV++  D GN    A+   I+   E     A+S + +           
Sbjct: 636 RSFTETDEAQHKLVILVKDNGNVSLSATATVIVKVVEPKEAFAASDVKNAEKDEEENNVT 695

Query: 256 --VLIILGVVLIVLGFVIILLIL 276
             ++I LG V ++    II+LI+
Sbjct: 696 FYLIITLGSVSVLFVISIIVLIV 718



 Score = 43.1 bits (100), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 40/142 (28%), Positives = 67/142 (47%), Gaps = 17/142 (11%)

Query: 102 CLDYETEDSYRFTVYATDTL---MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLAD 158
            LD ET   Y  T+ A D     +++  +V + + +VND  P F    Y  ++    + +
Sbjct: 415 ALDRETIAHYDITLEAKDAGQPPLSSVKSVTVQISDVNDNSPEFSSSPYAFYV----MEN 470

Query: 159 LTPGSVIGKVEAADGDKGDRVTLSLR----GPYEKMFS--IN---DSGHISIVDLSALNT 209
             PG  +  V A+D D G+   +S +    G  E  F+  IN   ++G I  +      T
Sbjct: 471 NAPGKSLFSVSASDKDTGENSAVSYQIWRDGGAENKFTSFININSENGEIYALKSFDFET 530

Query: 210 S-TIQLVVVATDTGNPPRQASV 230
           S T Q  ++ATD+G+P   ++V
Sbjct: 531 SKTFQFHILATDSGSPSLSSNV 552


>gi|410965846|ref|XP_003989451.1| PREDICTED: LOW QUALITY PROTEIN: cadherin EGF LAG seven-pass G-type
           receptor 1 [Felis catus]
          Length = 2896

 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 61/229 (26%), Positives = 107/229 (46%), Gaps = 22/229 (9%)

Query: 13  LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTT--- 69
           L V A+ + +  R A   L V+ + T+     F ++EY     ENL V Y +LT+     
Sbjct: 174 LKVSAVDHGSPRRSAATYLTVTVSDTNDHSPVFEQSEYRERVRENLEVGYEVLTIRATDG 233

Query: 70  NKPRDLRVKYWLSNDYGERFSIS-RQGDISLMQCLDYETEDSYRFTVYATDT-----LMT 123
           + P +  ++Y L    G  F I  R G +     +D E   +Y+  V A D       ++
Sbjct: 234 DAPSNANMRYRLLEGAGGVFEIDPRSGVVRTRAAVDREEAAAYQLLVEANDQGRNPGPLS 293

Query: 124 TSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS- 182
            +ATV+I V + ND  P+F   +Y + +P     D+   + + +V+A+D D+G    +  
Sbjct: 294 ATATVHIVVEDENDNYPQFSEKRYVVQVPE----DVAVNTPVLRVQASDRDQGQNAAIHY 349

Query: 183 --LRGPYEKMFSIND-SGHISIV---DLSALNTSTIQLVVVATDTGNPP 225
             + G  +  F ++  SG + ++   D  A+   T++  + A D G PP
Sbjct: 350 SIVSGNLKGQFYLHSLSGSLDVINPLDFEAIREYTLR--IKAQDGGRPP 396



 Score = 47.8 bits (112), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 51/189 (26%), Positives = 87/189 (46%), Gaps = 14/189 (7%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRDLR--VKYWLSN-DYGERFSISRQ---GDIS 98
           F++  Y +   E+  V   +LT+   + RD    + Y L+  +   RF++S Q   G I+
Sbjct: 541 FTQPVYELRLNEDAAVGSSVLTLRA-RDRDANSVITYQLTGGNTRNRFALSSQSGGGLIT 599

Query: 99  LMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLAD 158
           L   LDY+ E  Y   V A+D   + +A V I+V + N   P F+   Y + +      D
Sbjct: 600 LALPLDYKQERQYVLAVAASDGTRSHTAQVFINVTDANTHRPVFQSSHYTVSVSE----D 655

Query: 159 LTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSINDSGHI-SIVDLSALNTSTIQLV 215
              G+ +  + A D D G+  R+T  L  P  +     D+G + ++ +L   + +   L 
Sbjct: 656 RPVGTSVAVIGATDEDTGENARITYVLEDPVPQFRIDPDTGTVYTMTELDYEDQAAYTLA 715

Query: 216 VVATDTGNP 224
           + A D G P
Sbjct: 716 ITARDNGIP 724



 Score = 42.7 bits (99), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 75/167 (44%), Gaps = 30/167 (17%)

Query: 45  FSKNEYSVSALENLPVNYVLL---TVTTNKPRDLRVKYWLSNDYGER------------- 88
           F  + +  + LEN+P+ + +L    V  +   + R++Y L +                  
Sbjct: 418 FVSSPFQAAVLENVPLGHSVLHIQAVDADAGENARLRYRLVDTASASAGGGAGPGPQDPA 477

Query: 89  ------FSI-SRQGDISLMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDW 138
                 F I +  G I++   LD E  + YRF V A D     M++SA+V+I+V++VND 
Sbjct: 478 VPADFPFQIHNSSGWITVCAELDREEVEHYRFGVEAVDHGSPSMSSSASVSITVLDVNDN 537

Query: 139 DPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRG 185
           DP F  P YEL L      D   GS +  + A D D    +T  L G
Sbjct: 538 DPMFTQPVYELRLNE----DAAVGSSVLTLRARDRDANSVITYQLTG 580



 Score = 42.0 bits (97), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 37/140 (26%), Positives = 64/140 (45%), Gaps = 9/140 (6%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWL-SNDYGERFSISR-QGDISL 99
           F ++E  +   EN PV  V+  +  N P +    ++ Y +   +  E F +    GD+  
Sbjct: 853 FERDELELFVEENSPVGSVVARIRANDPDEGPNAQIMYQIVEGNVPEVFQLDLLSGDLRA 912

Query: 100 MQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPH--IPLA 157
           +  LD+E    Y   V AT   + + ATV+I +++ ND  P    P + +   +     +
Sbjct: 913 LVELDFEVRREYVLVVQATSAPLVSRATVHIRLLDQNDNPPVL--PDFHILFNNYVTNKS 970

Query: 158 DLTPGSVIGKVEAADGDKGD 177
           +  P  VIG++ A D D  D
Sbjct: 971 NSFPTGVIGRIPAHDPDLSD 990



 Score = 39.3 bits (90), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 53/208 (25%), Positives = 86/208 (41%), Gaps = 23/208 (11%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRDL---RVKYWLSNDYGER----FSIS-RQGD 96
           F    Y VS  EN P    ++ +  + P +    R+ Y +   + ER    F I    G 
Sbjct: 98  FPLPSYQVSVPENEPAGTGVIELRAHDPDEGEAGRLSYQMEALFDERSNGYFLIDPATGA 157

Query: 97  ISLMQCLDYETEDSYRFTVYATD--TLMTTSAT-VNISVVNVNDWDPRFRYPQYELFLPH 153
           +S  + LD ET+D++   V A D  +   ++AT + ++V + ND  P F   +Y   +  
Sbjct: 158 VSTARALDRETKDTHVLKVSAVDHGSPRRSAATYLTVTVSDTNDHSPVFEQSEYRERV-- 215

Query: 154 IPLADLTPGSVIGKVEAADGDKGDRVTLSLR--GPYEKMFSINDSGHI----SIVDLSAL 207
               +L  G  +  + A DGD      +  R       +F I+    +    + VD    
Sbjct: 216 --RENLEVGYEVLTIRATDGDAPSNANMRYRLLEGAGGVFEIDPRSGVVRTRAAVDRE-- 271

Query: 208 NTSTIQLVVVATDTGNPPRQASVPAIMH 235
             +  QL+V A D G  P   S  A +H
Sbjct: 272 EAAAYQLLVEANDQGRNPGPLSATATVH 299


>gi|218505777|ref|NP_001136236.1| protocadherin-15 isoform CD1-2 precursor [Homo sapiens]
          Length = 1957

 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 61/195 (31%), Positives = 100/195 (51%), Gaps = 14/195 (7%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGER-FSISRQ-GDISLMQ 101
           +F +  YS+   E + V  VLL +         + Y + N   +R F++S   G ++L +
Sbjct: 615 RFPQLMYSLEISEAMRVGAVLLNLQATDREGDSITYAIENGDPQRVFNLSETTGILTLGK 674

Query: 102 CLDYETEDSYRFTVYATDTL--MTTSATVNISVVNVNDWDPRFRYPQYELFLP-HIPLAD 158
            LD E+ D Y   + A+D     T++ATVNI V +VND  P F     + +LP ++ + +
Sbjct: 675 ALDRESTDRYILIITASDGRPDGTSTATVNIVVTDVNDNAPVF-----DPYLPRNLSVVE 729

Query: 159 LTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDSGHI-SIVDLSALNTSTIQLV 215
               + +G+V+A D D G   +V  SL G +  +F I  +G I + V L+       +LV
Sbjct: 730 EEANAFVGQVKATDPDAGINGQVHYSL-GNFNNLFRITSNGSIYTAVKLNREVRDYYELV 788

Query: 216 VVATDTGNPPRQASV 230
           VVATD    PR +++
Sbjct: 789 VVATDGAVHPRHSTL 803



 Score = 55.5 bits (132), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 62/241 (25%), Positives = 105/241 (43%), Gaps = 27/241 (11%)

Query: 6   DFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVN---- 61
           DF Q   LV++A Q +     A A L +     + +   F+   Y    LE+ PV     
Sbjct: 356 DFHQKFDLVIKAEQDNGHPLPAFAGLHIEILDENNQSPYFTMPSYQGYILESAPVGATIS 415

Query: 62  ----------YVLLTVTTNKPRDLRVKYWLSNDYGERFSISRQG---DISLMQCLDYETE 108
                      V L       +D  +  +L NDY   F++++ G    ++L+Q +D E +
Sbjct: 416 DSLNLTSPLRIVALDKDIEDTKDPELHLFL-NDYTSVFTVTQTGITRYLTLLQPVDREEQ 474

Query: 109 DSYRFTVYATDTLMTTSAT-VNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGK 167
            +Y F++ A D +  +    VNI V++ ND  P F    Y++++      D+ PG  + +
Sbjct: 475 QTYTFSITAFDGVQESEPVIVNIQVMDANDNTPTFPEISYDVYV----YTDMRPGDSVIQ 530

Query: 168 VEAADGDKGD--RVTLSLRGPYEKMFSIND-SGHISIV-DLSALNTSTIQLVVVATDTGN 223
           + A D D+G    +T  +    +  F IN  +G I+I   +  +   T  L V A D   
Sbjct: 531 LTAVDADEGSNGEITYEILVGAQGDFIINKTTGLITIAPGVEMIVGRTYALTVQAADNAP 590

Query: 224 P 224
           P
Sbjct: 591 P 591



 Score = 51.2 bits (121), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 71/233 (30%), Positives = 103/233 (44%), Gaps = 26/233 (11%)

Query: 13   LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKP 72
            LVV A       R++  TL +           F+ + Y+V   ENLP    +L +   K 
Sbjct: 787  LVVVATDGAVHPRHSTLTLAIKVLDIDDNSPVFTNSTYTVLVEENLPAGTTILQIEA-KD 845

Query: 73   RDL--RVKYWLSNDYGERFSISR--QGDISLMQCLDYET----EDSYRFTVYATD---TL 121
             DL   V Y + +   + F       G++SL++ LDYE     E S  F V A D   T+
Sbjct: 846  VDLGANVSYRIRSPEVKHFFALHPFTGELSLLRSLDYEAFPDQEASITFLVEAFDIYGTM 905

Query: 122  MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDK----GD 177
                ATV + V ++ND+ P F    Y+  +      D   G+ I  V A D D       
Sbjct: 906  PPGIATVTVIVKDMNDYPPVFSKRIYKGMV----APDAVKGTPITTVYAEDADPPGLPAS 961

Query: 178  RVTL---SLRGPY-EKMFSIN-DSGH-ISIVDLSALNTSTIQLVVVATDTGNP 224
            RV      ++ PY   +F +  DSG  I+ V+L+   T+  +LVVVA D G P
Sbjct: 962  RVRYRVDDVQFPYPASIFEVEEDSGRVITRVNLNEEPTTIFKLVVVAFDDGEP 1014



 Score = 46.6 bits (109), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 56/119 (47%), Gaps = 8/119 (6%)

Query: 76  RVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDTLMT---TSATVNISV 132
           +V Y L N +   F I+  G I     L+ E  D Y   V ATD  +    ++ T+ I V
Sbjct: 751 QVHYSLGN-FNNLFRITSNGSIYTAVKLNREVRDYYELVVVATDGAVHPRHSTLTLAIKV 809

Query: 133 VNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMF 191
           ++++D  P F    Y + +      +L  G+ I ++EA D D G  V+  +R P  K F
Sbjct: 810 LDIDDNSPVFTNSTYTVLVEE----NLPAGTTILQIEAKDVDLGANVSYRIRSPEVKHF 864


>gi|410975315|ref|XP_003994078.1| PREDICTED: cadherin-23-like isoform 1 [Felis catus]
          Length = 1114

 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 59/195 (30%), Positives = 90/195 (46%), Gaps = 20/195 (10%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWLSNDYGERFSIS-RQGDISLM 100
           F +  Y  +  E++PV  V+LTVT           ++Y L +  G +F+I+   GDI ++
Sbjct: 162 FDQPSYQEAVFEDVPVGTVILTVTATDADSGNFALLEYSLGDGEG-KFAINPATGDIYVL 220

Query: 101 QCLDYETEDSYRFTVYATD-------TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
             LD E +D Y  T  A D            S  V I V++VND  P+F  PQ+   +  
Sbjct: 221 SSLDREKKDHYILTALAKDNPGDIASNRRENSVQVVIQVLDVNDCRPQFSKPQFSTSV-- 278

Query: 154 IPLADLTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSIN-DSGHISIVDLSALNTS 210
               +   G+ +  + A D D+G    +  SL GP  + F ++ DSG ++       +  
Sbjct: 279 --YENEPAGTSVITMMATDQDEGSNGELAYSLEGPGVEAFHVDLDSGLVT-TKRPLQSYE 335

Query: 211 TIQLVVVATDTGNPP 225
              L VVATD G PP
Sbjct: 336 RFNLTVVATDGGQPP 350



 Score = 40.4 bits (93), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 34/107 (31%), Positives = 49/107 (45%), Gaps = 8/107 (7%)

Query: 92  SRQGDISLMQCLDYETEDSYRFTVYATDTLMTTSAT---VNISVVNVNDWDPRFRYPQYE 148
           S  G +   + +DYE      FTV A+D      A    V + +V++ND +P F  P Y+
Sbjct: 109 SSAGKVIANRTVDYEEVHWLNFTVRASDNGSPPRAAEIPVYLEIVDINDNNPIFDQPSYQ 168

Query: 149 LFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSIN 194
             +      D+  G+VI  V A D D G+   L    G  E  F+IN
Sbjct: 169 EAV----FEDVPVGTVILTVTATDADSGNFALLEYSLGDGEGKFAIN 211



 Score = 38.1 bits (87), Expect = 7.5,   Method: Compositional matrix adjust.
 Identities = 30/122 (24%), Positives = 54/122 (44%), Gaps = 17/122 (13%)

Query: 125 SATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR 184
           +A + +++++VND  P+F+      +   I L   TPG+ +  V A D DKG    ++  
Sbjct: 36  NAKLTVNILDVNDNTPQFKPFGITYYTERI-LEGATPGTTLIAVAAVDPDKGLNGLITY- 93

Query: 185 GPYEKMFSINDSGHISIVDLSA-----------LNTSTIQLVVVATDTGNPPRQASVPAI 233
                +  +   G++ + D SA                +   V A+D G+PPR A +P  
Sbjct: 94  ----TLLDLTPPGYVQLEDSSAGKVIANRTVDYEEVHWLNFTVRASDNGSPPRAAEIPVY 149

Query: 234 MH 235
           + 
Sbjct: 150 LE 151


>gi|218505781|ref|NP_001136238.1| protocadherin-15 isoform CD1-7 precursor [Homo sapiens]
          Length = 1952

 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 61/195 (31%), Positives = 100/195 (51%), Gaps = 14/195 (7%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGER-FSISRQ-GDISLMQ 101
           +F +  YS+   E + V  VLL +         + Y + N   +R F++S   G ++L +
Sbjct: 615 RFPQLMYSLEISEAMRVGAVLLNLQATDREGDSITYAIENGDPQRVFNLSETTGILTLGK 674

Query: 102 CLDYETEDSYRFTVYATDTL--MTTSATVNISVVNVNDWDPRFRYPQYELFLP-HIPLAD 158
            LD E+ D Y   + A+D     T++ATVNI V +VND  P F     + +LP ++ + +
Sbjct: 675 ALDRESTDRYILIITASDGRPDGTSTATVNIVVTDVNDNAPVF-----DPYLPRNLSVVE 729

Query: 159 LTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDSGHI-SIVDLSALNTSTIQLV 215
               + +G+V+A D D G   +V  SL G +  +F I  +G I + V L+       +LV
Sbjct: 730 EEANAFVGQVKATDPDAGINGQVHYSL-GNFNNLFRITSNGSIYTAVKLNREVRDYYELV 788

Query: 216 VVATDTGNPPRQASV 230
           VVATD    PR +++
Sbjct: 789 VVATDGAVHPRHSTL 803



 Score = 55.5 bits (132), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 62/241 (25%), Positives = 105/241 (43%), Gaps = 27/241 (11%)

Query: 6   DFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVN---- 61
           DF Q   LV++A Q +     A A L +     + +   F+   Y    LE+ PV     
Sbjct: 356 DFHQKFDLVIKAEQDNGHPLPAFAGLHIEILDENNQSPYFTMPSYQGYILESAPVGATIS 415

Query: 62  ----------YVLLTVTTNKPRDLRVKYWLSNDYGERFSISRQG---DISLMQCLDYETE 108
                      V L       +D  +  +L NDY   F++++ G    ++L+Q +D E +
Sbjct: 416 DSLNLTSPLRIVALDKDIEDTKDPELHLFL-NDYTSVFTVTQTGITRYLTLLQPVDREEQ 474

Query: 109 DSYRFTVYATDTLMTTSAT-VNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGK 167
            +Y F++ A D +  +    VNI V++ ND  P F    Y++++      D+ PG  + +
Sbjct: 475 QTYTFSITAFDGVQESEPVIVNIQVMDANDNTPTFPEISYDVYV----YTDMRPGDSVIQ 530

Query: 168 VEAADGDKGD--RVTLSLRGPYEKMFSIND-SGHISIV-DLSALNTSTIQLVVVATDTGN 223
           + A D D+G    +T  +    +  F IN  +G I+I   +  +   T  L V A D   
Sbjct: 531 LTAVDADEGSNGEITYEILVGAQGDFIINKTTGLITIAPGVEMIVGRTYALTVQAADNAP 590

Query: 224 P 224
           P
Sbjct: 591 P 591



 Score = 51.2 bits (121), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 71/233 (30%), Positives = 103/233 (44%), Gaps = 26/233 (11%)

Query: 13   LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKP 72
            LVV A       R++  TL +           F+ + Y+V   ENLP    +L +   K 
Sbjct: 787  LVVVATDGAVHPRHSTLTLAIKVLDIDDNSPVFTNSTYTVLVEENLPAGTTILQIEA-KD 845

Query: 73   RDL--RVKYWLSNDYGERFSISR--QGDISLMQCLDYET----EDSYRFTVYATD---TL 121
             DL   V Y + +   + F       G++SL++ LDYE     E S  F V A D   T+
Sbjct: 846  VDLGANVSYRIRSPEVKHFFALHPFTGELSLLRSLDYEAFPDQEASITFLVEAFDIYGTM 905

Query: 122  MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDK----GD 177
                ATV + V ++ND+ P F    Y+  +      D   G+ I  V A D D       
Sbjct: 906  PPGIATVTVIVKDMNDYPPVFSKRIYKGMV----APDAVKGTPITTVYAEDADPPGLPAS 961

Query: 178  RVTL---SLRGPY-EKMFSIN-DSGH-ISIVDLSALNTSTIQLVVVATDTGNP 224
            RV      ++ PY   +F +  DSG  I+ V+L+   T+  +LVVVA D G P
Sbjct: 962  RVRYRVDDVQFPYPASIFEVEEDSGRVITRVNLNEEPTTIFKLVVVAFDDGEP 1014



 Score = 46.6 bits (109), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 56/119 (47%), Gaps = 8/119 (6%)

Query: 76  RVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDTLMT---TSATVNISV 132
           +V Y L N +   F I+  G I     L+ E  D Y   V ATD  +    ++ T+ I V
Sbjct: 751 QVHYSLGN-FNNLFRITSNGSIYTAVKLNREVRDYYELVVVATDGAVHPRHSTLTLAIKV 809

Query: 133 VNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMF 191
           ++++D  P F    Y + +      +L  G+ I ++EA D D G  V+  +R P  K F
Sbjct: 810 LDIDDNSPVFTNSTYTVLVEE----NLPAGTTILQIEAKDVDLGANVSYRIRSPEVKHF 864


>gi|61162135|dbj|BAD91056.1| Cj-cadherin [Caridina japonica]
          Length = 3000

 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 52/141 (36%), Positives = 74/141 (52%), Gaps = 12/141 (8%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDL----RVKYWLSN-DYGERFSISRQ-GDIS 98
            F KN Y     EN  + + +LTVT    +DL    R++Y ++N + G  F++    G I 
Sbjct: 1328 FDKNLYEAEVDENEDIQHTVLTVTA---KDLDESSRIRYEITNGNIGGAFAVKNMTGAIY 1384

Query: 99   LMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLAD 158
            +   LDYET   Y  T+ ATD++   +  V I + +VND  P F  P YE  +      +
Sbjct: 1385 VAGPLDYETRKRYELTLVATDSVNEATTKVIIHIADVNDRPPEFDRPIYEATILEEQSEN 1444

Query: 159  LTPGSVIGKVEAADGDKGDRV 179
            L P S+I KV A DGD+ DRV
Sbjct: 1445 L-PISLI-KVTATDGDR-DRV 1462



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 57/202 (28%), Positives = 89/202 (44%), Gaps = 18/202 (8%)

Query: 41  RELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLS--NDYGERFSIS-RQGDI 97
           R  QF   +Y  +  EN P +  +++V      D  ++Y L         F+I    G +
Sbjct: 560 RPPQFYLPKYEKTIPENSPKDSDIISVKAKSFADREIRYTLKAKGQGAGTFNIGPTSGIV 619

Query: 98  SLMQCLDYETEDS---YRFTVYATDTL--MTTSATVNISVVNVNDWDPRFRYPQYELFLP 152
            L + LD+E       Y+  V AT+     +TS  + I V +VND  P+F  P Y+    
Sbjct: 620 KLAKELDFEDVRQPHIYQLVVTATEDSGGFSTSVDLTIKVTDVNDNPPKFDLPDYQA--- 676

Query: 153 HIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSGHISIVDLSAL----N 208
           H    D+  GS I KV+A D D G    + +       F +++ G   I +  AL    N
Sbjct: 677 HNIDEDIPIGSSILKVKARDDDSGTNAEI-VYSVSNDHFRVDNKG--IIYNRKALDADDN 733

Query: 209 TSTIQLVVVATDTGNPPRQASV 230
            +  +  V ATD G PP++ + 
Sbjct: 734 NAYYEFTVTATDKGEPPKEGTA 755



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 46/167 (27%), Positives = 79/167 (47%), Gaps = 12/167 (7%)

Query: 43  LQFSKNEYSVSALENLPVNYVLLTVTTNKPR-DLRVKYWLSNDYGERFSISRQGDISLM- 100
           L+F K +Y     ENLP    L  +   +   +  VKY L   +   F++   G +  + 
Sbjct: 124 LRFLKPKYEAFVYENLPPGTELQGLEEMEAMGEEDVKYELIGGHS-VFALHHVGGMPTIV 182

Query: 101 --QCLDYETEDSYRFTVYATDT--LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
             + LD E +D+Y+ T+ A D   + T  A + + + ++ND  P F    +  F+P    
Sbjct: 183 TKKALDREAQDTYKLTLRAYDREGMDTADAKIIVHIHDMNDHAPVFTQSMFYFFVP---- 238

Query: 157 ADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSGHISIVD 203
            +++   +IG+V A DGD GD+V   L  P      I  +G I +++
Sbjct: 239 LNISRFDIIGRVVAHDGD-GDKVVYRLAYPSNTFTIIPQTGEIMLIE 284



 Score = 43.1 bits (100), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 53/188 (28%), Positives = 86/188 (45%), Gaps = 37/188 (19%)

Query: 56  ENLPVNYVLLTVTTNKPRD------LRVKYWLSNDYGERFSISRQGDISLMQCLDYETED 109
           E++P+   +L V   K RD        + Y +SND+   F +  +G I   + LD +  +
Sbjct: 681 EDIPIGSSILKV---KARDDDSGTNAEIVYSVSNDH---FRVDNKGIIYNRKALDADDNN 734

Query: 110 SY-RFTVYATDTL---MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVI 165
           +Y  FTV ATD        +AT+ I   N ND +P+F     +++ P++   +  P +++
Sbjct: 735 AYYEFTVTATDKGEPPKEGTATIRIYTKNKNDEEPKF---SQQVYTPNVD-ENAGPYTLV 790

Query: 166 GKVEAADGDKGDRVTLSLRGPYEKMFSINDSGHISIVDLS----------ALNTSTIQLV 215
             V A+D D GD V     G  EK     +SG   I  ++          +L+    +L 
Sbjct: 791 TTVVASDKD-GDNVEFGFVG-QEK-----ESGQFVIEKMTGVIRLRQGEISLDRDKYELN 843

Query: 216 VVATDTGN 223
           V A D GN
Sbjct: 844 VTAVDDGN 851


>gi|242014336|ref|XP_002427847.1| protocadherin-16 precursor, putative [Pediculus humanus corporis]
 gi|212512316|gb|EEB15109.1| protocadherin-16 precursor, putative [Pediculus humanus corporis]
          Length = 5078

 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 62/189 (32%), Positives = 95/189 (50%), Gaps = 18/189 (9%)

Query: 46   SKNEYSVSALENLPVNYVLLTVTTNKPRDL-RVKYWLSNDYGE-RFSI-SRQGDISLMQC 102
            +K  YSVS  E+LPV +V+ T+    P  + ++ Y L    GE +F I S  G + L   
Sbjct: 1769 TKLNYSVS--EDLPVGHVIATINAVDPDTIGKITYNLVGGGGENKFEIESSSGILKLNDS 1826

Query: 103  LDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPG 162
            LD ET+DSY+  V A D +  T A V I V + ND  P F    Y   +P     +   G
Sbjct: 1827 LDRETKDSYQLQVRANDGIQYTDAIVKIFVTDTNDNPPVFSDNAYSFDVPE----NTIRG 1882

Query: 163  SVIGKVEAADGDKG--DRVTLSLRGPY-EKMFSIN-DSGHISIVDLSALNTSTIQ---LV 215
            + +G++ A D D+G   +V+  +   +   +FS+N  SG  ++   + L+   +Q    V
Sbjct: 1883 TRVGEIMATDEDEGINGQVSYQVISDWANDVFSLNSQSGVFTLT--TRLDYEEVQHYIFV 1940

Query: 216  VVATDTGNP 224
            V A D+G P
Sbjct: 1941 VQAQDSGKP 1949



 Score = 57.8 bits (138), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 64/234 (27%), Positives = 109/234 (46%), Gaps = 30/234 (12%)

Query: 12   TLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNK 71
            TL V A  + N    + AT++V+    +    +F++  +SV+  EN  +   ++ VT++ 
Sbjct: 2786 TLTVEAFDHGNPQLTSTATVLVNVLDKNDNPPRFTR-LFSVNVTENAEIGSFVIRVTSSD 2844

Query: 72   P---RDLRVKYWLSNDYGERFSISR-QGDISLMQCLDYETEDSYRFTVYATDTLMTTSAT 127
                 +    Y  + + G +FS+    G++++   LD ET+D Y   V A D    +   
Sbjct: 2845 QDIGENANATYSFTENPGNKFSLDPLSGNVTVAGPLDRETQDEYLLKVAAFDGAWRSETP 2904

Query: 128  VNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVI--GKVEAADGDK---GDRVTLS 182
            + I++ + ND  P F +  Y    P       +  SVI  G+V A D DK      ++ S
Sbjct: 2905 LTITIQDQNDNAPEFEHFDYSFNFPE------SQSSVIFVGQVIATDRDKHGANSVISYS 2958

Query: 183  LRGPYEKMFSIN-DSGHI----------SIVDLSALNTSTIQLVVVATDTGNPP 225
            L+ P + +F+I+  SG I          + ++ S  N  T  L V+ATD G PP
Sbjct: 2959 LKHPSD-IFTIDPASGEIFSKRPLRYKYTALEHSPENQYT--LTVLATDNGKPP 3009



 Score = 54.7 bits (130), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 58/196 (29%), Positives = 92/196 (46%), Gaps = 20/196 (10%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWL-SNDYGERFSISRQGDISLM 100
            F    Y+    EN+ +   ++TV+    +  ++  ++Y + S D  E  +I+  G I  +
Sbjct: 1971 FDPMSYNNEVFENVTIGTNVVTVSATDLDSGQNGAIEYKIISGDENEDLAIANNGTIYTV 2030

Query: 101  QCLDYETEDSYRFTVYATDTL----MTTSATVNISVV--NVNDWDPRFRYPQYELFLPHI 154
            + LD ET+ +Y   V  TD         S+TV +++V  +VND  P F  P       +I
Sbjct: 2031 KELDRETKSAYNLVVTGTDLAEPPQQRLSSTVQVTIVLKDVNDMSPEFITPTKTSVSENI 2090

Query: 155  PLADLTPGSVIGKVEAADGDKGDRVTL--SLRGPYEKMFSIND-SGHISIV-DLSALNTS 210
            PL      +V+  ++A D D+G    L  SL  P  K FS+    G + +V  L     +
Sbjct: 2091 PL-----NTVVLAIKAIDKDEGRNSYLEYSLYDP-TKTFSVGTIDGLLRVVGKLDRETVA 2144

Query: 211  TIQLVVVATDTGNPPR 226
               L VVA D G+PPR
Sbjct: 2145 NYSLEVVAKDKGDPPR 2160



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 60/228 (26%), Positives = 110/228 (48%), Gaps = 25/228 (10%)

Query: 25  RYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVT---TNKPRDLRVKYWL 81
           ++A   L V+    +    +FS+++ +V+ LE+ P N ++  +T   +++  +  V Y+L
Sbjct: 573 KWAYTQLKVTVLDENDESPKFSQDQINVTLLEDTPPNTLVAILTASDSDQGTNGSVAYFL 632

Query: 82  SNDYGERFS-----ISRQGDISLMQCLDYETEDSYRFTVYATDTLM---TTSATVNISVV 133
             ++  ++S      S  G ++    LD E    Y   V A D  +   +++A VN+ V 
Sbjct: 633 DAEFSPKYSGPFALDSLTGQLTTKSYLDREITPYYEIKVIAKDQGVPPRSSTAVVNLFVE 692

Query: 134 NVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTL--SLRGPYEKMF 191
           +VND  P F    Y L    I   ++  G+ + +V A D D+G    L  S+   ++ +F
Sbjct: 693 DVNDNSPEF----YPLKYFTIVSENIATGNKVLQVFAHDLDEGKNSELKYSIESGHDDLF 748

Query: 192 SIN-DSGHISIVDLSALNTST---IQLVVVATDTGNPPRQASVPAIMH 235
           +IN  +G I +  LS+L  +     +LV+   D G   R+ S  AI+ 
Sbjct: 749 NINPKTGEIHV--LSSLKQTPKGLFELVISVKDAGG--RKCSENAIVE 792



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 57/197 (28%), Positives = 94/197 (47%), Gaps = 20/197 (10%)

Query: 45   FSKNEYSVSALEN-LPVNYVLLTVTTNKPRDL--RVKYWLSNDYG-ERFSISRQ-GDISL 99
            FS N YS    EN +    V   + T++   +  +V Y + +D+  + FS++ Q G  +L
Sbjct: 1866 FSDNAYSFDVPENTIRGTRVGEIMATDEDEGINGQVSYQVISDWANDVFSLNSQSGVFTL 1925

Query: 100  MQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQY--ELFLPHI 154
               LDYE    Y F V A D+    ++++ TV  +V+++ND  P F    Y  E+F    
Sbjct: 1926 TTRLDYEEVQHYIFVVQAQDSGKPSLSSTLTVYFNVIDLNDNAPLFDPMSYNNEVF---- 1981

Query: 155  PLADLTPGSVIGKVEAADGDKGDRVTLSLR---GPYEKMFSINDSGHI-SIVDLSALNTS 210
               ++T G+ +  V A D D G    +  +   G   +  +I ++G I ++ +L     S
Sbjct: 1982 --ENVTIGTNVVTVSATDLDSGQNGAIEYKIISGDENEDLAIANNGTIYTVKELDRETKS 2039

Query: 211  TIQLVVVATDTGNPPRQ 227
               LVV  TD   PP+Q
Sbjct: 2040 AYNLVVTGTDLAEPPQQ 2056



 Score = 48.9 bits (115), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 51/179 (28%), Positives = 85/179 (47%), Gaps = 17/179 (9%)

Query: 27   ALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDL---RVKYWLSN 83
            A  TL+V+  G +L    F    + V   EN PV   +LT+      D     V+Y +S+
Sbjct: 3121 AQVTLVVT--GENLYSPVFPALSFQVIIPENDPVGSTILTIKATDDDDGPNGMVEYKISS 3178

Query: 84   -DYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDTLM---TTSATVNISVVNVNDW 138
             +   +F + S  G + +++ LDY+T  +Y   V ATD        +A V IS+ +VND 
Sbjct: 3179 GNEDSKFHLNSTTGALKILKPLDYDTVSNYHLNVTATDLGFEPHQATAMVTISLTDVNDN 3238

Query: 139  DPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN 194
             P F    Y+ ++P     +  P + I +V+A D D      +    +RG  + +F+I+
Sbjct: 3239 PPTFNQSVYKAYIPE----NSPPKTFIFQVQAHDIDSPKNAIIHYSIIRGTGKDVFTID 3293



 Score = 45.8 bits (107), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 61/224 (27%), Positives = 97/224 (43%), Gaps = 23/224 (10%)

Query: 25   RYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWL 81
            RY    + V+    +     F    YS S  EN  +   +L V+    ++  + +V+Y +
Sbjct: 2160 RYTKQNIFVNVVDENDNSPMFDPKHYSASIAENASIGASVLQVSATDVDEGLNGKVRYSI 2219

Query: 82   -SNDYGERFSISRQ-GDISLMQCLDYETEDSYRFTVYATDT-------LMTTSATVNISV 132
             S D    FSIS   G + + + L++E +  Y  TV A D+       +   +AT++I V
Sbjct: 2220 FSGDENRDFSISEDTGVVRVAKNLNFERKPRYLLTVRAEDSSNNDDDNIRYDTATMSIIV 2279

Query: 133  VNVNDWDPRF-RYPQYELFLPH-IPLADLTPGSVIGKVEAADGDK---GDRVTLSLRGPY 187
             ++ND  P F   P Y   + + +P    +P      V A+D D      +V   L+   
Sbjct: 2280 RDINDNPPVFLDSPYYAYVMENTVP----SPDGYFLTVRASDADSPQYNGQVRYFLKEGD 2335

Query: 188  EKMFSINDS-GHISIVD-LSALNTSTIQLVVVATDTGNPPRQAS 229
              +F IN S G + +   L     S   L +VA DTG PP   S
Sbjct: 2336 AGLFRINASTGDLYLSRPLDREKQSEYLLTLVAMDTGTPPLSGS 2379



 Score = 45.8 bits (107), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 52/191 (27%), Positives = 89/191 (46%), Gaps = 18/191 (9%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGER-FSI-SRQGDISL 99
            F+++ Y     EN P    +  V     + P++  + Y +    G+  F+I S+ G I  
Sbjct: 3242 FNQSVYKAYIPENSPPKTFIFQVQAHDIDSPKNAIIHYSIIRGTGKDVFTIDSKTGTIFS 3301

Query: 100  MQCLDYETEDSYRFTVYAT--DTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLA 157
               LDYE +D Y   + A   D+ M  S  V + V  VN++ P+F  P +     H  ++
Sbjct: 3302 KSRLDYEEKDEYSLEILAANPDSPMFGSTKVIVYVTGVNEFYPKFVTPVF-----HFEIS 3356

Query: 158  DLTP-GSVIGKVEAAD---GDKGDRVTLSLRGPYEKMFSI-NDSGHISIV-DLSALNTST 211
            + +  G+ +G ++A D   GD G    L +    +K FSI +++G I +   L     + 
Sbjct: 3357 ESSEVGTSVGTIQATDEDAGDDGKVYYLFVGSSNDKGFSIGSETGTILVSRRLDRETQNR 3416

Query: 212  IQLVVVATDTG 222
            + L VVA + G
Sbjct: 3417 VVLTVVAKNAG 3427



 Score = 44.7 bits (104), Expect = 0.070,   Method: Compositional matrix adjust.
 Identities = 57/205 (27%), Positives = 88/205 (42%), Gaps = 21/205 (10%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDL------RVKYWLSNDYGERFSISRQ-GDI 97
            FS+ +  V   EN PV    L V  +  +DL      R K+ L+ +  ERF I+   G I
Sbjct: 912  FSREKDFVEVNENSPVG---LEVYHSIAKDLDSGPNSRFKFNLTKNAQERFRINEATGVI 968

Query: 98   SLMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHI 154
             L + ++ +        V  TD     + +  TV IS+ +VND  P F +  YE  L   
Sbjct: 969  YLNRKINDDPGTLIPIEVTVTDFGKPPLMSKQTVVISIKDVNDHTPVFDHTSYETSL--- 1025

Query: 155  PLADLTPGSVIGKVEAADGDKGDRVTLSLR---GPYEKMFSINDSGHISI-VDLSALNTS 210
             L          ++ A+D D G    +S     G +E  F I   G++ +   L      
Sbjct: 1026 -LESTRVNKRFFRLVASDADLGLNGLVSYEISEGNFEGKFGIFPDGYLYVKSSLDREERD 1084

Query: 211  TIQLVVVATDTGNPPRQASVPAIMH 235
               L+V A D+G P R ++V  ++H
Sbjct: 1085 YYSLIVTARDSGEPSRSSTVSVVIH 1109



 Score = 40.0 bits (92), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 38/134 (28%), Positives = 62/134 (46%), Gaps = 12/134 (8%)

Query: 103 LDYETEDSYRFTVYATDTLM---TTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADL 159
           LD E    Y  T+ ATD      ++SA++ I V +VND +P F   +Y + L  +     
Sbjct: 446 LDREEISKYNLTIVATDKGTPPRSSSASLIILVNDVNDHEPVFEKSEYSVVLSELS---- 501

Query: 160 TPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-DSGHISI-VDLSALNTSTIQL 214
            PG+ +  + A+D D G    +    + G     F +N DSG I+    +      +++L
Sbjct: 502 PPGTYVAGITASDEDTGVNAQIYYAFVSGNDNNWFELNADSGLITTKTTIDREIQGSVEL 561

Query: 215 VVVATDTGNPPRQA 228
            + A D G  P+ A
Sbjct: 562 KISARDGGPSPKWA 575



 Score = 38.9 bits (89), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 51/224 (22%), Positives = 98/224 (43%), Gaps = 24/224 (10%)

Query: 25  RYALATLIVSKAGTSLRELQFSKNEYSVSALE-NLPVNYVLLTVTTNKPRDLRVKYW--- 80
           R + A+LI+     +  E  F K+EYSV   E + P  YV     +++   +  + +   
Sbjct: 468 RSSSASLIILVNDVNDHEPVFEKSEYSVVLSELSPPGTYVAGITASDEDTGVNAQIYYAF 527

Query: 81  LSNDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVN 136
           +S +    F + +  G I+    +D E + S    + A D   +       + ++V++ N
Sbjct: 528 VSGNDNNWFELNADSGLITTKTTIDREIQGSVELKISARDGGPSPKWAYTQLKVTVLDEN 587

Query: 137 DWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDS 196
           D  P+F   Q  + L    L D  P +++  + A+D D+G   +++     +  FS   S
Sbjct: 588 DESPKFSQDQINVTL----LEDTPPNTLVAILTASDSDQGTNGSVAYF--LDAEFSPKYS 641

Query: 197 GHISIVDLSALNTST----------IQLVVVATDTGNPPRQASV 230
           G  ++  L+   T+            ++ V+A D G PPR ++ 
Sbjct: 642 GPFALDSLTGQLTTKSYLDREITPYYEIKVIAKDQGVPPRSSTA 685


>gi|115387123|ref|NP_149045.3| protocadherin-15 isoform CD1-4 precursor [Homo sapiens]
 gi|116242702|sp|Q96QU1.2|PCD15_HUMAN RecName: Full=Protocadherin-15; Flags: Precursor
 gi|14581464|gb|AAK31804.1| protocadherin 15 [Homo sapiens]
 gi|162318576|gb|AAI56451.1| Protocadherin 15 [synthetic construct]
          Length = 1955

 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 61/195 (31%), Positives = 100/195 (51%), Gaps = 14/195 (7%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGER-FSISRQ-GDISLMQ 101
           +F +  YS+   E + V  VLL +         + Y + N   +R F++S   G ++L +
Sbjct: 615 RFPQLMYSLEISEAMRVGAVLLNLQATDREGDSITYAIENGDPQRVFNLSETTGILTLGK 674

Query: 102 CLDYETEDSYRFTVYATDTL--MTTSATVNISVVNVNDWDPRFRYPQYELFLP-HIPLAD 158
            LD E+ D Y   + A+D     T++ATVNI V +VND  P F     + +LP ++ + +
Sbjct: 675 ALDRESTDRYILIITASDGRPDGTSTATVNIVVTDVNDNAPVF-----DPYLPRNLSVVE 729

Query: 159 LTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDSGHI-SIVDLSALNTSTIQLV 215
               + +G+V+A D D G   +V  SL G +  +F I  +G I + V L+       +LV
Sbjct: 730 EEANAFVGQVKATDPDAGINGQVHYSL-GNFNNLFRITSNGSIYTAVKLNREVRDYYELV 788

Query: 216 VVATDTGNPPRQASV 230
           VVATD    PR +++
Sbjct: 789 VVATDGAVHPRHSTL 803



 Score = 55.5 bits (132), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 62/241 (25%), Positives = 105/241 (43%), Gaps = 27/241 (11%)

Query: 6   DFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVN---- 61
           DF Q   LV++A Q +     A A L +     + +   F+   Y    LE+ PV     
Sbjct: 356 DFHQKFDLVIKAEQDNGHPLPAFAGLHIEILDENNQSPYFTMPSYQGYILESAPVGATIS 415

Query: 62  ----------YVLLTVTTNKPRDLRVKYWLSNDYGERFSISRQG---DISLMQCLDYETE 108
                      V L       +D  +  +L NDY   F++++ G    ++L+Q +D E +
Sbjct: 416 DSLNLTSPLRIVALDKDIEDTKDPELHLFL-NDYTSVFTVTQTGITRYLTLLQPVDREEQ 474

Query: 109 DSYRFTVYATDTLMTTSAT-VNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGK 167
            +Y F++ A D +  +    VNI V++ ND  P F    Y++++      D+ PG  + +
Sbjct: 475 QTYTFSITAFDGVQESEPVIVNIQVMDANDNTPTFPEISYDVYV----YTDMRPGDSVIQ 530

Query: 168 VEAADGDKGD--RVTLSLRGPYEKMFSIND-SGHISIV-DLSALNTSTIQLVVVATDTGN 223
           + A D D+G    +T  +    +  F IN  +G I+I   +  +   T  L V A D   
Sbjct: 531 LTAVDADEGSNGEITYEILVGAQGDFIINKTTGLITIAPGVEMIVGRTYALTVQAADNAP 590

Query: 224 P 224
           P
Sbjct: 591 P 591



 Score = 51.2 bits (121), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 71/233 (30%), Positives = 103/233 (44%), Gaps = 26/233 (11%)

Query: 13   LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKP 72
            LVV A       R++  TL +           F+ + Y+V   ENLP    +L +   K 
Sbjct: 787  LVVVATDGAVHPRHSTLTLAIKVLDIDDNSPVFTNSTYTVLVEENLPAGTTILQIEA-KD 845

Query: 73   RDL--RVKYWLSNDYGERFSISR--QGDISLMQCLDYET----EDSYRFTVYATD---TL 121
             DL   V Y + +   + F       G++SL++ LDYE     E S  F V A D   T+
Sbjct: 846  VDLGANVSYRIRSPEVKHFFALHPFTGELSLLRSLDYEAFPDQEASITFLVEAFDIYGTM 905

Query: 122  MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDK----GD 177
                ATV + V ++ND+ P F    Y+  +      D   G+ I  V A D D       
Sbjct: 906  PPGIATVTVIVKDMNDYPPVFSKRIYKGMV----APDAVKGTPITTVYAEDADPPGLPAS 961

Query: 178  RVTL---SLRGPY-EKMFSIN-DSGH-ISIVDLSALNTSTIQLVVVATDTGNP 224
            RV      ++ PY   +F +  DSG  I+ V+L+   T+  +LVVVA D G P
Sbjct: 962  RVRYRVDDVQFPYPASIFEVEEDSGRVITRVNLNEEPTTIFKLVVVAFDDGEP 1014



 Score = 46.6 bits (109), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 56/119 (47%), Gaps = 8/119 (6%)

Query: 76  RVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDTLMT---TSATVNISV 132
           +V Y L N +   F I+  G I     L+ E  D Y   V ATD  +    ++ T+ I V
Sbjct: 751 QVHYSLGN-FNNLFRITSNGSIYTAVKLNREVRDYYELVVVATDGAVHPRHSTLTLAIKV 809

Query: 133 VNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMF 191
           ++++D  P F    Y + +      +L  G+ I ++EA D D G  V+  +R P  K F
Sbjct: 810 LDIDDNSPVFTNSTYTVLVEE----NLPAGTTILQIEAKDVDLGANVSYRIRSPEVKHF 864


>gi|15072441|gb|AAK31581.1| protocadherin 15 [Homo sapiens]
          Length = 1955

 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 61/195 (31%), Positives = 100/195 (51%), Gaps = 14/195 (7%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGER-FSISRQ-GDISLMQ 101
           +F +  YS+   E + V  VLL +         + Y + N   +R F++S   G ++L +
Sbjct: 615 RFPQLMYSLEISEAMRVGAVLLNLQATDREGDSITYAIENGDPQRVFNLSETTGILTLGK 674

Query: 102 CLDYETEDSYRFTVYATDTL--MTTSATVNISVVNVNDWDPRFRYPQYELFLP-HIPLAD 158
            LD E+ D Y   + A+D     T++ATVNI V +VND  P F     + +LP ++ + +
Sbjct: 675 ALDRESTDRYILIITASDGRPDGTSTATVNIVVTDVNDNAPVF-----DPYLPRNLSVVE 729

Query: 159 LTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDSGHI-SIVDLSALNTSTIQLV 215
               + +G+V+A D D G   +V  SL G +  +F I  +G I + V L+       +LV
Sbjct: 730 EEANAFVGQVKATDPDAGINGQVHYSL-GNFNNLFRITSNGSIYTAVKLNREVRDYYELV 788

Query: 216 VVATDTGNPPRQASV 230
           VVATD    PR +++
Sbjct: 789 VVATDGAVHPRHSTL 803



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 61/241 (25%), Positives = 104/241 (43%), Gaps = 27/241 (11%)

Query: 6   DFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVN---- 61
           DF Q   LV++A Q +     A A L +     + +   F+   Y    LE+ PV     
Sbjct: 356 DFHQKFDLVIKAEQDNGHPLPAFAGLHIEILDENNQSPYFTMPSYQGYILESAPVGATIS 415

Query: 62  ----------YVLLTVTTNKPRDLRVKYWLSNDYGERFSISRQG---DISLMQCLDYETE 108
                      V L       +D  +  +L NDY   F++++ G    ++L+  +D E +
Sbjct: 416 DSLNLTSPLRIVALDKDIEDTKDPELHLFL-NDYTSVFTVTQTGITRYLTLLLPVDREEQ 474

Query: 109 DSYRFTVYATDTLMTTSAT-VNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGK 167
            +Y F++ A D +  +    VNI V++ ND  P F    Y++++      D+ PG  + +
Sbjct: 475 QTYTFSITAFDGVQESEPVIVNIQVMDANDNTPTFPEISYDVYV----YTDMRPGDSVIQ 530

Query: 168 VEAADGDKGD--RVTLSLRGPYEKMFSIND-SGHISIV-DLSALNTSTIQLVVVATDTGN 223
           + A D D+G    +T  +    +  F IN  +G I+I   +  +   T  L V A D   
Sbjct: 531 LTAVDADEGSNGEITYEILVGAQGDFIINKTTGLITIAPGVEMIVGRTYALTVQAADNAP 590

Query: 224 P 224
           P
Sbjct: 591 P 591



 Score = 51.6 bits (122), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 71/233 (30%), Positives = 103/233 (44%), Gaps = 26/233 (11%)

Query: 13   LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKP 72
            LVV A       R++  TL +           F+ + Y+V   ENLP    +L +   K 
Sbjct: 787  LVVVATDGAVHPRHSTLTLAIKVLDIDDNSPVFTNSTYTVLVEENLPAGTTILQIEA-KD 845

Query: 73   RDL--RVKYWLSNDYGERFSISR--QGDISLMQCLDYET----EDSYRFTVYATD---TL 121
             DL   V Y + +   + F       G++SL++ LDYE     E S  F V A D   T+
Sbjct: 846  VDLGANVSYRIRSPEVKHFFALHPFTGELSLLRSLDYEAFPDQEASITFLVEAFDIYGTM 905

Query: 122  MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDK----GD 177
                ATV + V ++ND+ P F    Y+  +      D   G+ I  V A D D       
Sbjct: 906  PPGIATVTVIVKDMNDYPPVFSKQIYKGMV----APDAVKGTPITTVYAEDADPPGLPAS 961

Query: 178  RVTL---SLRGPY-EKMFSIN-DSGH-ISIVDLSALNTSTIQLVVVATDTGNP 224
            RV      ++ PY   +F +  DSG  I+ V+L+   T+  +LVVVA D G P
Sbjct: 962  RVRYRVDDVQFPYPASIFEVEEDSGRVITRVNLNEEPTTIFKLVVVAFDDGEP 1014



 Score = 46.6 bits (109), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 56/119 (47%), Gaps = 8/119 (6%)

Query: 76  RVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDTLMT---TSATVNISV 132
           +V Y L N +   F I+  G I     L+ E  D Y   V ATD  +    ++ T+ I V
Sbjct: 751 QVHYSLGN-FNNLFRITSNGSIYTAVKLNREVRDYYELVVVATDGAVHPRHSTLTLAIKV 809

Query: 133 VNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMF 191
           ++++D  P F    Y + +      +L  G+ I ++EA D D G  V+  +R P  K F
Sbjct: 810 LDIDDNSPVFTNSTYTVLVEE----NLPAGTTILQIEAKDVDLGANVSYRIRSPEVKHF 864


>gi|345799035|ref|XP_003434519.1| PREDICTED: cadherin-23 isoform 1 [Canis lupus familiaris]
          Length = 3354

 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 60/195 (30%), Positives = 90/195 (46%), Gaps = 20/195 (10%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWLSNDYGERFSIS-RQGDISLM 100
            F +  Y  +  E++PV  V+LTVT +         ++Y L +  G +F+I+   GDI ++
Sbjct: 2402 FDQPSYQEAVFEDVPVGTVILTVTASDADSGNFALIEYSLGDGEG-KFAINPTTGDIYVL 2460

Query: 101  QCLDYETEDSYRFTVYATDT-------LMTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
              LD E +D Y  T  A D            S  V I V++VND  P+F  PQ+   +  
Sbjct: 2461 SSLDREKKDHYILTALAKDNPGDIASNRRENSVQVVIQVLDVNDCRPQFSKPQFSTSV-- 2518

Query: 154  IPLADLTPGSVIGKVEAADGDKGDRVTL--SLRGPYEKMFSIN-DSGHISIVDLSALNTS 210
                +   G+ +  + A D D G    L  SL GP  + F ++ DSG ++       +  
Sbjct: 2519 --YENEPAGTSVITMMATDQDAGSNGELAYSLEGPGVEAFHVDMDSGLVT-TKRPLQSYE 2575

Query: 211  TIQLVVVATDTGNPP 225
               L VVATD G PP
Sbjct: 2576 RFNLTVVATDGGQPP 2590



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 68/217 (31%), Positives = 98/217 (45%), Gaps = 42/217 (19%)

Query: 45  FSKNEYSVSALENLPVNY-VLLTVTTNKPRDLRVKYWLSNDYGE-----------RFSI- 91
           FSK  Y VS +EN+     VL    T+  R        S +YG+           +F I 
Sbjct: 671 FSKPAYFVSVVENIMAGATVLFLNATDLDR--------SREYGQESIIYSLEGSSQFRIN 722

Query: 92  SRQGDISLMQCLDYETEDSYRFTVYATD-----TLMTTSATVNISVVNVNDWDPRFRYPQ 146
           +R G+I+    LD ET+  Y   V A D        T  ATVNI+++++ND  P ++   
Sbjct: 723 ARSGEITTTSLLDRETKSEYILIVRAVDGGVGHNQKTGIATVNITLLDINDNHPTWKDAP 782

Query: 147 YELFLPHIPLADLT-PGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSINDS-GHIS--- 200
           Y     +I L ++T P S +  V A D D G+  TL     P  K +S+N S G I    
Sbjct: 783 Y-----YINLVEMTPPDSDVTTVVAVDPDLGENGTLVYSIQPSNKFYSLNSSTGKIRTTH 837

Query: 201 -IVDLSALNTSTIQL----VVVATDTGNPPRQASVPA 232
            ++D    +    +L    VV  TD G PP +A+  A
Sbjct: 838 VMLDRENPDPDEAELMRKIVVSVTDCGRPPLRATSSA 874



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 65/210 (30%), Positives = 98/210 (46%), Gaps = 28/210 (13%)

Query: 45  FSKNEYSVSALENLPVNYVLLTV--TTNKPRDL-RVKYWLSNDYGERFSISRQ-GDISLM 100
           FS+  Y+VS  EN+ V   +LTV  T N       V Y+ S+D  +RFS+ +  G I L+
Sbjct: 460 FSQPLYNVSLYENVTVGTSVLTVLATDNDVGTFGEVNYFFSDD-PDRFSLDKDTGLIMLI 518

Query: 101 QCLDYETEDSYRFTVYATDTL-MTTSATVNISVVNVNDWDPRFRYPQYELFL----PHIP 155
             LDYE    +  TV A D     T+  V I+V++VND  P F+   Y   L    P + 
Sbjct: 519 AKLDYELIQRFTLTVIARDGGGEETTGRVRINVLDVNDNVPTFQKDAYVGALRENEPSV- 577

Query: 156 LADLTPGSVIGKVEAADGDK--GDRVTLSL-----RGPYEKMFSINDSGHISI---VDLS 205
                  + + ++ A D D    +++T S+      G Y  +      G IS+   +D  
Sbjct: 578 -------TQLVRLRATDEDSPPNNQITYSIVNASAFGSYFDISVYEGYGVISVSRPLDYE 630

Query: 206 ALNTSTIQLVVVATDTGNPPRQASVPAIMH 235
            +    I L V+A D GNPP  ++VP  + 
Sbjct: 631 QIPNGLIYLTVMAKDAGNPPLNSTVPVTIE 660



 Score = 47.8 bits (112), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 56/211 (26%), Positives = 95/211 (45%), Gaps = 28/211 (13%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVT-TNKPRDL--RVKYWLSNDYGERFSISR-QGDISLM 100
            FS +  +V  LEN P  + +L VT T++   L   + Y +     +RF I    G I + 
Sbjct: 2069 FSPSTLTVHLLENCPPGFSVLQVTATDRDSGLNGELIYRIEAGAQDRFLIHPITGVIRVA 2128

Query: 101  QC-LDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
               +D E ++SYR TV ATD     ++ +A + + + +VND  P F  P   + +    L
Sbjct: 2129 NATIDREEQESYRLTVVATDRGTVPLSGTAIITVLIDDVNDSRPEFLKPIQTVSV----L 2184

Query: 157  ADLTPGSVIGKVEAADGDKGDRVTLSLRG------------PYEKMFSIN-DSGHISI-- 201
                PG++I  + A D D   R+   + G              E  F++N ++G + +  
Sbjct: 2185 ESAEPGTIIANITAIDRDLNPRLEYHIIGIVAKDDTDRLVPDQEDAFAVNINTGSVMVKS 2244

Query: 202  -VDLSALNTSTIQLVVVATDTGNPPRQASVP 231
             ++   + T  + L V+   +  P R  SVP
Sbjct: 2245 PLNRELVATYEVTLSVIDNASDLPERSVSVP 2275



 Score = 47.0 bits (110), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 63/235 (26%), Positives = 107/235 (45%), Gaps = 45/235 (19%)

Query: 65   LTVTTNKPRDLRVKYWLS---NDYG---------------ERFSIS-RQGDISLMQCLDY 105
            ++V+ + PR+ RV  WL+   ND G                +FS+  R   +  +  LD 
Sbjct: 1002 VSVSEDVPREFRV-VWLNCTDNDVGLNAELSYFITGGNVDGKFSVGYRDAVVRTVVSLDR 1060

Query: 106  ETEDSYRFTVYATDT-----LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLT 160
            ET  +Y   + A D        T +ATV ++V++VND  P F    YE  +P     D+ 
Sbjct: 1061 ETTAAYTLVLEAIDNGPVGKRRTGTATVFVTVLDVNDNRPIFLQSSYEASVPE----DIP 1116

Query: 161  PGSVIGKVEAADGDKGD--RVTLS-LRGPYEKMFSINDSGHISIVDLSALN---TSTIQL 214
             G  I +++AAD D+G+  RV    L G +   F I+ S  + +     L+    S+  L
Sbjct: 1117 EGHSIVQLKAADADEGEFGRVWYRILHGNHGNNFRIHVSNGLLMRGPRPLDREQNSSHVL 1176

Query: 215  VVVATDTGNPPRQASVPAIMHFPE------AIVQQASSKLN----SGTSSTVLII 259
            +V A +    P ++SV  I++  +         QQ  S+L     +G  ++V+++
Sbjct: 1177 IVEAYNHDLGPMRSSVRVIVYVEDVNDEAPVFTQQQYSRLGLRETAGVGTSVIVV 1231



 Score = 47.0 bits (110), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 62/203 (30%), Positives = 89/203 (43%), Gaps = 23/203 (11%)

Query: 43   LQFSKNEYSVSALENLPVNYVLLTVTTNKPRDL-----RVKYWLSNDYGERFSI-SRQGD 96
            +QFS   Y  + LENL +   ++ V      +L     R   + S      F I S  G 
Sbjct: 1311 VQFSNASYEAAILENLALGTEIVRVQAYSIDNLNQITYRFDAYTSAQAKALFKIDSVTGV 1370

Query: 97   ISLMQCLDYETEDSYRFTVYATDTLMTTSATVN--ISVVNVNDWDPRFRYPQYELFLPHI 154
            I++   +D E  D Y  TV A D      +TV   I+V++ ND  PRF +         +
Sbjct: 1371 ITVKGLVDREKGDFYTLTVVADDGGPKVDSTVKVYITVLDENDNSPRFDFTSDSAV--SV 1428

Query: 155  PLADLTPGSVIGKVEAADGDKGD--RVTLSL-RGPYEKMFSI---NDS-GHISI---VDL 204
            P  D   G  +  V+A D D G   +V  SL  G     F I   NDS G + +   +D 
Sbjct: 1429 P-EDCPVGQRVATVKARDPDAGSNGQVVFSLASGNIAGAFDIVTTNDSIGEVFVARPLDR 1487

Query: 205  SALNTSTIQLVVVATDTGNPPRQ 227
              L+   ++  VVA+D G PPR+
Sbjct: 1488 EELDHYILK--VVASDRGTPPRK 1508



 Score = 43.9 bits (102), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 54/199 (27%), Positives = 90/199 (45%), Gaps = 26/199 (13%)

Query: 44  QFSKNEYSVSALENLPVNYVL--LTVTTNKPRDLRV----KYWLSNDYGERF-----SIS 92
           +F+ +EYSV+  E   V + L       +K  +L +    + +L  +  + F     S+ 
Sbjct: 347 EFNSSEYSVAITELAQVGFALPLFIQVVDKDENLGLNSMFEVYLVGNNSQHFIISPTSVQ 406

Query: 93  RQGDISLMQC--LDYETEDSYRFTVYATDTL--MTTSATVNISVVNVNDWDPRFRYPQYE 148
            + DI +     LDYET D Y F ++A +++      A V I+++N ND  P F  P Y 
Sbjct: 407 GKADIRIRVAVPLDYETVDRYDFDLFANESVPDHVGYAKVKITLINENDNRPIFSQPLYN 466

Query: 149 LFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDSGHISIVDLSA 206
           + L      ++T G+ +  V A D D G    V        ++     D+G I ++  + 
Sbjct: 467 VSL----YENVTVGTSVLTVLATDNDVGTFGEVNYFFSDDPDRFSLDKDTGLIMLI--AK 520

Query: 207 LNTSTIQ---LVVVATDTG 222
           L+   IQ   L V+A D G
Sbjct: 521 LDYELIQRFTLTVIARDGG 539



 Score = 42.0 bits (97), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 65/286 (22%), Positives = 118/286 (41%), Gaps = 61/286 (21%)

Query: 4    EDDFL-QPITLVVRA----IQYDNQDRYALATLIVSK-----AGTSLREL---------- 43
            +D FL  PIT V+R     I  + Q+ Y L  +   +     +GT++  +          
Sbjct: 2113 QDRFLIHPITGVIRVANATIDREEQESYRLTVVATDRGTVPLSGTAIITVLIDDVNDSRP 2172

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTTNKPRDL--RVKYW------------LSNDYGERF 89
            +F K   +VS LE+     ++  +T    RDL  R++Y             L  D  + F
Sbjct: 2173 EFLKPIQTVSVLESAEPGTIIANITAID-RDLNPRLEYHIIGIVAKDDTDRLVPDQEDAF 2231

Query: 90   SIS-RQGDISLMQCLDYETEDSYRFTVYATD--------TLMTTSATVNISVVNVNDWDP 140
            +++   G + +   L+ E   +Y  T+   D        ++   +A + +++++VND  P
Sbjct: 2232 AVNINTGSVMVKSPLNRELVATYEVTLSVIDNASDLPERSVSVPNAKLTVNILDVNDNTP 2291

Query: 141  RFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSGHIS 200
            +F+      +   I L   TPG+ +  V A D DKG    ++       +  +   G++ 
Sbjct: 2292 QFKPFGITYYTERI-LEGATPGTTLIAVAAVDPDKGLNGLITY-----TLLDLMPPGYVQ 2345

Query: 201  IVDLSA-----------LNTSTIQLVVVATDTGNPPRQASVPAIMH 235
            + D SA                +   V A+D G+PPR A +P  + 
Sbjct: 2346 LEDASAGKVIANRTVDYEEVHWLNFTVRASDNGSPPRAAEIPVYLE 2391



 Score = 40.0 bits (92), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 33/104 (31%), Positives = 49/104 (47%), Gaps = 8/104 (7%)

Query: 95   GDISLMQCLDYETEDSYRFTVYATDTLMTTSAT---VNISVVNVNDWDPRFRYPQYELFL 151
            G +   + +DYE      FTV A+D      A    V + +V+VND +P F  P Y+  +
Sbjct: 2352 GKVIANRTVDYEEVHWLNFTVRASDNGSPPRAAEIPVYLEIVDVNDNNPIFDQPSYQEAV 2411

Query: 152  PHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSIN 194
                  D+  G+VI  V A+D D G+   +    G  E  F+IN
Sbjct: 2412 ----FEDVPVGTVILTVTASDADSGNFALIEYSLGDGEGKFAIN 2451



 Score = 38.9 bits (89), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 58/203 (28%), Positives = 89/203 (43%), Gaps = 22/203 (10%)

Query: 31  LIVSKAGTSLRELQFSKNEYSVSAL---ENLPVNYVLLTVTTNKPRDLR---VKYWLSND 84
           +++S     +  L F  N +  + L   E+ PV     +VT    RD+    + + +S +
Sbjct: 16  VLISGCWGQVNRLPFFTNHFFDTYLLISEDTPVGS---SVTQLLARDMDNDPLVFGVSGE 72

Query: 85  YGERFSISR--QGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRF 142
              RF       G + L Q LD ET+  +      +D     +  VNI V +VND  P F
Sbjct: 73  EASRFFAVEPDTGVVWLRQPLDRETKSEFTVEFSVSDHQGVITRKVNIQVGDVNDNAPTF 132

Query: 143 RYPQYELFLPHIPLADLTP-GSVIGKVEAADGD--KGDRVTLSLRGPYEKMFSINDS-GH 198
               Y + +P     + TP G+ I  V A D D   G  V  S + P    F+I+ + G 
Sbjct: 133 HNQPYSVRIP-----ENTPVGTPIFIVNATDPDLGAGGSVLYSFQPP-SPFFAIDSARGI 186

Query: 199 ISIV-DLSALNTSTIQLVVVATD 220
           +++V +L    T   QL V ATD
Sbjct: 187 VTVVRELDYETTQAYQLTVNATD 209


>gi|441600767|ref|XP_004087640.1| PREDICTED: protocadherin-15 isoform 4 [Nomascus leucogenys]
          Length = 1789

 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 62/195 (31%), Positives = 100/195 (51%), Gaps = 14/195 (7%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGER-FSISRQ-GDISLMQ 101
           +F +  YS+   E + V  VLL +         V Y + N   +R F++S   G ++L +
Sbjct: 627 RFPQLMYSLEISEAMRVGAVLLNLQATDREGDSVTYAIENGDPQRVFNLSETTGILTLGK 686

Query: 102 CLDYETEDSYRFTVYATDTL--MTTSATVNISVVNVNDWDPRFRYPQYELFLP-HIPLAD 158
            LD E+ D Y   + A+D     T++ATVNI V +VND  P F     + +LP ++ + +
Sbjct: 687 ALDRESTDRYILIITASDGRPGGTSTATVNIVVTDVNDNAPVF-----DPYLPRNLSVVE 741

Query: 159 LTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDSGHI-SIVDLSALNTSTIQLV 215
               + +G+V+A D D G   +V  SL G +  +F I  +G I + V L+       +LV
Sbjct: 742 EEANAFVGQVKATDPDAGINGQVHYSL-GNFNNLFRITSNGSIYTAVKLNREVRDYYELV 800

Query: 216 VVATDTGNPPRQASV 230
           VVATD    PR +++
Sbjct: 801 VVATDGAVHPRHSTL 815



 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 50/195 (25%), Positives = 87/195 (44%), Gaps = 28/195 (14%)

Query: 6   DFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYV-- 63
           DF Q   LV++A Q +     A A+L +     + +   F+   Y    LE+ PV     
Sbjct: 361 DFHQKFDLVIKAEQDNGHPLPAFASLHIEILDENNQSPYFTMPSYQGYILESAPVGATIS 420

Query: 64  --------LLTVTTNK------PRDLRVK----YWLSNDYGERFSISRQG---DISLMQC 102
                   L  V  +K      P  +  K    +   NDY   F++++ G    ++L+Q 
Sbjct: 421 DSLNLTSPLRIVALDKDIEDVPPSGVPTKDPELHLFLNDYTSVFTVTQTGITRYLTLLQP 480

Query: 103 LDYETEDSYRFTVYATDTLMTTSAT-VNISVVNVNDWDPRFRYPQYELFLPHIPLADLTP 161
           +D E + +Y F++ A D +  +    VNI V++ ND  P F    Y++++      D+ P
Sbjct: 481 VDREEQQTYTFSITAFDGVQESEPVIVNIQVMDANDNTPTFPEISYDVYV----YTDMRP 536

Query: 162 GSVIGKVEAADGDKG 176
           G  + ++ A D D+G
Sbjct: 537 GDSVIQLTAVDADEG 551



 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 71/233 (30%), Positives = 103/233 (44%), Gaps = 26/233 (11%)

Query: 13   LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKP 72
            LVV A       R++  TL +           F+ + Y+V   ENLP    +L +   K 
Sbjct: 799  LVVVATDGAVHPRHSTLTLAIKVLDIDDNSPVFTNSTYTVLVEENLPAGTTILQIEA-KD 857

Query: 73   RDL--RVKYWLSNDYGERFSISR--QGDISLMQCLDYET----EDSYRFTVYATD---TL 121
             DL   V Y + +   + F       G++SL++ LDYE     E S  F V A D   T+
Sbjct: 858  VDLGANVSYRIRSPEVKHFFALHPFTGELSLLRSLDYEAFPDQEASITFLVEAFDIYGTM 917

Query: 122  MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDK----GD 177
                ATV + V ++ND+ P F    Y+  +      D   G+ I  V A D D       
Sbjct: 918  PPGIATVTVIVKDMNDYPPVFSKRIYKGMV----APDAVKGTPITTVYAEDADPPGLPAS 973

Query: 178  RVTLSL---RGPY-EKMFSIN-DSGH-ISIVDLSALNTSTIQLVVVATDTGNP 224
            RV   +   + PY   +F +  DSG  I+ V+L+   T+  +LVVVA D G P
Sbjct: 974  RVRYRIDDVQFPYPASIFDVEEDSGRVITRVNLNEEPTTIFKLVVVAFDDGEP 1026



 Score = 45.4 bits (106), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 56/119 (47%), Gaps = 8/119 (6%)

Query: 76  RVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDTLMT---TSATVNISV 132
           +V Y L N +   F I+  G I     L+ E  D Y   V ATD  +    ++ T+ I V
Sbjct: 763 QVHYSLGN-FNNLFRITSNGSIYTAVKLNREVRDYYELVVVATDGAVHPRHSTLTLAIKV 821

Query: 133 VNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMF 191
           ++++D  P F    Y + +      +L  G+ I ++EA D D G  V+  +R P  K F
Sbjct: 822 LDIDDNSPVFTNSTYTVLVEE----NLPAGTTILQIEAKDVDLGANVSYRIRSPEVKHF 876


>gi|327270405|ref|XP_003219980.1| PREDICTED: protocadherin gamma-B5-like [Anolis carolinensis]
          Length = 1545

 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 74/271 (27%), Positives = 119/271 (43%), Gaps = 31/271 (11%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPR---DLRVKYWLSNDYGERFSIS-------RQ 94
            F K+ YS+   EN P    L T+  + P    + ++ Y + N   +   IS         
Sbjct: 1148 FEKSSYSIFTPENNPAGTALFTIKASDPDVGLNAKITYSIFNSNIQELPISSYISINTET 1207

Query: 95   GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFL 151
            G I   +  DYE    ++  V A D     ++++AT+ + +++ ND  P+  YP  E   
Sbjct: 1208 GTIYAQRSFDYEEFREFQLQVKAQDGGSPPLSSNATIRVFILDRNDNTPQILYPSPEN-- 1265

Query: 152  PHIPLADLTPGS-----VIGKVEAADGDKGDRVTLS---LRGPYEKMFSI-NDSGHISIV 202
                L ++ P S     +I KV A D D G    LS   ++    ++FSI + +G I   
Sbjct: 1266 KGSTLFEMVPRSAEEDYLITKVVAVDADSGHNAWLSYHLVQATEPRLFSIGSHTGEIRTA 1325

Query: 203  DLSALNTSTIQ-LVVVATDTGNPPRQASVPAIM----HFPEAIVQQASSKLNSGTSSTVL 257
                   +  Q L VV  D G PP  A+V   +    +F EAI +  +   +  T   + 
Sbjct: 1326 RAFLERDAVKQRLAVVVKDNGQPPLSATVTLNLVFAENFQEAIPEMKNQARDLETQDDLQ 1385

Query: 258  IILGVVLIVLGFVIIL-LILYI-HKNKHTKN 286
              L V L V+ F+ +L +IL I  K +H+ N
Sbjct: 1386 FYLVVALAVISFLFLLTVILAITMKVRHSGN 1416



 Score = 61.6 bits (148), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 67/274 (24%), Positives = 123/274 (44%), Gaps = 37/274 (13%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKP---RDLRVKYWLSNDYGERFSIS-------RQ 94
           F K+ Y    LEN P    +  V  + P   R+ ++ Y   +   E   +S         
Sbjct: 367 FEKSSYIAYILENNPAGVFIFHVKASDPDLNRNAQITYSFLSTSIEDLPLSSYISINSET 426

Query: 95  GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYP----QY 147
           G I   +  DYE    ++  V A D     + +SATV + +++ ND  P+  YP    + 
Sbjct: 427 GTIYSQRSFDYEQLREFQIEVRAQDGGSPPLNSSATVTVCILDRNDNSPQILYPSQAPEG 486

Query: 148 ELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSI-NDSGHI---- 199
                 +P +    G ++ KV A D D G    LS   L+     +F+I + +G I    
Sbjct: 487 SSVFEMVPRS-AESGYLVTKVVAVDADSGHNSWLSFHLLQATEPSLFTIGSHTGEIQTAR 545

Query: 200 SIVDLSALNTSTIQLVVVATDTGNPPRQASVPAIMHFPEAIVQQASSKLNSGTSST---- 255
           ++++  AL     +LVV+  D G+PP  A+V   + F E+  Q+A  ++NS  + +    
Sbjct: 546 TLLERDALKQ---RLVVMVKDNGHPPLSATVTVNLVFAESF-QEALPEINSQPNDSESPS 601

Query: 256 ---VLIILGVVLIVLGFVIILLILYIHKNKHTKN 286
                ++L + L+   F++ +++  + K + ++N
Sbjct: 602 DIQFYLVLALALVSFLFLVTVILTIMMKLRRSRN 635



 Score = 39.7 bits (91), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 39/136 (28%), Positives = 61/136 (44%), Gaps = 17/136 (12%)

Query: 103  LDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADL 159
            LD E    Y  T+ ATD     ++T  T+++ + ++ND  P F    Y +F P    A  
Sbjct: 1106 LDREEISEYNITITATDRGTPPLSTQKTISLEISDINDNAPAFEKSSYSIFTPENNPA-- 1163

Query: 160  TPGSVIGKVEAADGDKG--DRVTLSLRG------PYEKMFSIN-DSGHI-SIVDLSALNT 209
              G+ +  ++A+D D G   ++T S+        P     SIN ++G I +         
Sbjct: 1164 --GTALFTIKASDPDVGLNAKITYSIFNSNIQELPISSYISINTETGTIYAQRSFDYEEF 1221

Query: 210  STIQLVVVATDTGNPP 225
               QL V A D G+PP
Sbjct: 1222 REFQLQVKAQDGGSPP 1237


>gi|410349159|gb|JAA41183.1| FAT tumor suppressor homolog 1 [Pan troglodytes]
          Length = 4588

 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 63/213 (29%), Positives = 104/213 (48%), Gaps = 18/213 (8%)

Query: 33   VSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTV-TTNKPRDL--RVKYWLSNDYG-ER 88
            V+  G +L    F +NEY V   EN P++ +++ V TT+    +   V Y + ND+  +R
Sbjct: 2480 VTVIGGNLHSPAFLQNEYEVELAENAPLHTLVMEVKTTDGDSGIYGHVTYHIVNDFAKDR 2539

Query: 89   FSISRQGDISLMQCLDYET--EDSYRFTVYATDTLMTTS-ATVNISVVNVNDWDPRFRYP 145
            F I+ +G I  ++ LD ET  E      + A D     +  TVN+ + + ND  P+FR  
Sbjct: 2540 FYINERGQIFTLEKLDRETPAEKVISVRLMAKDAGGKVAFCTVNVILTDDNDNAPQFRAT 2599

Query: 146  QYELFLPHIPLADLTPGSVIGKVEAADGDKGDR--VTLSLRGPYEKM---FSIND-SGHI 199
            +YE+ +     +    G+ + KV A+D D+G    +T ++    E +     IN  SG I
Sbjct: 2600 KYEVNIG----SSAAKGTSVIKVLASDADEGSNADITYAIEADSESVKENLEINKLSGVI 2655

Query: 200  SIVD-LSALNTSTIQLVVVATDTGNPPRQASVP 231
            +  + L  L        V A D G+P +++ VP
Sbjct: 2656 TTKESLIGLENEFFTFFVRAVDNGSPSKESVVP 2688



 Score = 61.2 bits (147), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 41/156 (26%), Positives = 77/156 (49%), Gaps = 11/156 (7%)

Query: 33   VSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWL---SNDYGERF 89
            +SK   S   + F ++ ++ + +E+ PV +++  ++   P    +  W      +Y   F
Sbjct: 1346 ISKPKPSPEPISFEESFFTFTVMESDPVAHMIGVISVEPPG---IPLWFDITGGNYDSHF 1402

Query: 90   SISR-QGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYE 148
             + R  G I + + LD E + +Y  TV ATD   T    V I V++ ND  P+F   +YE
Sbjct: 1403 DVDRGTGTIIVAKPLDAEQKSNYNLTVEATDGTTTILTQVFIKVIDTNDHRPQFSTSKYE 1462

Query: 149  LFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR 184
            + +P     D  P + I ++ A D D+ +++  +L+
Sbjct: 1463 VVIPE----DTAPETEILQISAVDQDEKNKLIYTLQ 1494



 Score = 58.2 bits (139), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 59/244 (24%), Positives = 106/244 (43%), Gaps = 40/244 (16%)

Query: 4    EDDFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYV 63
            E++F    T  VRA+   +  + ++  + V      ++  +FS+  Y+ +  E++P+   
Sbjct: 2665 ENEFF---TFFVRAVDNGSPSKESVVPVYVKILPPEMQLPKFSEPFYTFTVSEDVPIGTE 2721

Query: 64   LLTVTTNKPRDLRVKYWLSN----DYGERFSISRQ-GDISLMQCLDYETEDSYRFTVYAT 118
            +  +       +       N    +  E F I RQ G + L + LD+ET   Y+F++ A 
Sbjct: 2722 IDLIRAEHSGTVLYSLVKGNTPESNRDESFVIDRQSGRLKLEKSLDHETTKWYQFSILAR 2781

Query: 119  ----DTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGD 174
                D  M  S  V+I V + ND  P F    YE F+    + +L  GS + ++ A+D D
Sbjct: 2782 CTQDDHEMVASVDVSIQVKDANDNSPVFESSPYEAFI----VENLPGGSRVIQIRASDAD 2837

Query: 175  KGDRVTLSLRGPYEKMFSINDSGHISIVDLSALNTST----------------IQLVVVA 218
             G    +        M+S++ S  + +++  A+N  T                 Q+ VVA
Sbjct: 2838 SGTNGQV--------MYSLDQSQSVEVIESFAINMETGWITTLKELDHEKRDNYQIKVVA 2889

Query: 219  TDTG 222
            +D G
Sbjct: 2890 SDHG 2893



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 57/196 (29%), Positives = 94/196 (47%), Gaps = 23/196 (11%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSN-DYGERFSIS-RQGDISLMQC 102
            F K  YS    EN+ V+  ++ V  N P  L+V Y +++ D   +F+I+   G I+++  
Sbjct: 2182 FEKPFYSAEIAENIQVHSPVVHVQANSPEGLKVFYSITDGDPFSQFTINFNTGVINVIAP 2241

Query: 103  LDYETEDSYRFTVYATDTLMTTSATVNISVV--NVNDWDPRFRYPQYELFLPHIPLADLT 160
            LD+E   +Y+ ++ ATD+L    A V + ++  ++ND  P F    Y         A L+
Sbjct: 2242 LDFEAHPAYKLSIRATDSLTGAHAEVFVDIIVEDINDNPPVFAQQSY--------AATLS 2293

Query: 161  PGSVIG----KVEAADGDK--GDRVTLSLRGPYEK---MFSINDS-GHISIVD-LSALNT 209
              SVIG    +V A D D      ++  + G + K    F ++ S G IS++  L    +
Sbjct: 2294 EASVIGTSVVQVRATDSDSEPNRGISYQMFGNHSKSHDHFHVDSSTGLISLLRTLDYEQS 2353

Query: 210  STIQLVVVATDTGNPP 225
                + V A D G PP
Sbjct: 2354 RQHTIFVRAVDGGMPP 2369



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 61/225 (27%), Positives = 108/225 (48%), Gaps = 19/225 (8%)

Query: 13   LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVT---T 69
            L+VRA   D   R+  A+++++    +    +FS + Y+++  EN     +L  V     
Sbjct: 3095 LLVRAT--DGGGRFCQASVVLTLEDVNDNAPEFSADPYAITVFENTEPGTLLTRVQATDA 3152

Query: 70   NKPRDLRVKYWLSNDYGERFSISR-QGDISLMQCLDYETEDSYRFTVYATDT----LMTT 124
            +   + ++ Y L +    +FSI+   G I L + LD E +  Y  ++ A D      +T 
Sbjct: 3153 DAGLNRKILYSLIDSADGQFSINELSGIIQLEKPLDRELQAVYTLSLKAVDQGLPRRLTA 3212

Query: 125  SATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAA--DGDKGDRVTLS 182
            + TV +SV+++ND  P F Y +Y   +      D+  G+ + +V AA  D +    +T S
Sbjct: 3213 TGTVVVSVLDINDNPPVFEYREYGATVSE----DILVGTEVLQVYAASRDIEANAEITYS 3268

Query: 183  -LRGPYEKMFSIND-SGHISIVD-LSALNTSTIQLVVVATDTGNP 224
             + G     FSI+  +G + I++ L   ++    L V ATD G P
Sbjct: 3269 IISGNEHGKFSIDSKTGAVFIIENLDYESSHEYYLTVEATDGGTP 3313



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 44/145 (30%), Positives = 67/145 (46%), Gaps = 8/145 (5%)

Query: 90   SISRQGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYEL 149
            +I  +  + + + LD E  D+Y  T+ ATD   ++ A V + V++ ND  P      Y  
Sbjct: 2971 NIQNEWKVYVKKPLDREKRDNYLLTITATDGTFSSKAIVEVKVLDANDNSPVCEKTLYSD 3030

Query: 150  FLPHIPLADLTPGSVIGKVEAADGD--KGDRVTLSLRGPYEKMFSIN-DSGHISI-VDLS 205
              P     D+ PG +I +V A D D      +T +L G   + F +N D+G +     L 
Sbjct: 3031 TTPE----DVLPGKLILQVSATDADIRSNAEITYTLLGSGAEKFKLNPDTGELKTSTPLD 3086

Query: 206  ALNTSTIQLVVVATDTGNPPRQASV 230
                +   L+V ATD G    QASV
Sbjct: 3087 REEQAVYHLLVRATDGGGRFCQASV 3111



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 60/215 (27%), Positives = 101/215 (46%), Gaps = 21/215 (9%)

Query: 27   ALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLS---- 82
            A  T++VS    +     F   EY  +  E++ V   +L V     RD+     ++    
Sbjct: 3212 ATGTVVVSVLDINDNPPVFEYREYGATVSEDILVGTEVLQVYAAS-RDIEANAEITYSII 3270

Query: 83   --NDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVN 136
              N++G +FSI S+ G + +++ LDYE+   Y  TV ATD     ++  ATVN++V ++N
Sbjct: 3271 SGNEHG-KFSIDSKTGAVFIIENLDYESSHEYYLTVEATDGGTPSLSDVATVNVNVTDIN 3329

Query: 137  DWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS-LRGPYEKMFSIND 195
            D  P F    Y   +    + + +  +V+   + ADG     +  S + G     F+I+ 
Sbjct: 3330 DNTPVFSQDTYTTVISEDAVLEQSVITVMA--DDADGPSNSHIHYSIIDGNQGSSFTIDP 3387

Query: 196  -SGHISIVDLSALNTSTIQ---LVVVATDTGNPPR 226
              G + +  L  L+   I    L V A+D G+PPR
Sbjct: 3388 VRGEVKVTKL--LDREMISGYTLTVQASDNGSPPR 3420



 Score = 43.5 bits (101), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 55/215 (25%), Positives = 91/215 (42%), Gaps = 19/215 (8%)

Query: 24  DRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLR---VKYW 80
           DR A   ++V   G +    +F++  Y  +  EN+P+   +++++   P +     V Y 
Sbjct: 442 DRKASTKVLVKVLGANSNPPEFTQTAYKAAFDENVPIGTTVMSLSAVDPDEGENGYVTYS 501

Query: 81  LSNDYGERFSISR-QGDISLMQCLDYE-TEDSYRFTVYATDTLMTTSATVN----ISVVN 134
           ++N     F+I    G +S  + LDYE     Y   + A+D  +     V     I++ N
Sbjct: 502 IANLNHVPFAIDHFTGAVSTSENLDYELMPRVYTLRIRASDWGLPYRREVEVLATITLNN 561

Query: 135 VNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYE-KMFSI 193
           +ND  P F     E  +P     DL  G  I  V A D D+   V   +    E  +FS+
Sbjct: 562 LNDNTPLFEKINCEGTIPR----DLGVGEQITTVSAIDADELQLVQYQIEAGNELDLFSL 617

Query: 194 NDSGHI-----SIVDLSALNTSTIQLVVVATDTGN 223
           N +  +     S++D      S   L + ATD  N
Sbjct: 618 NPNSGVLSLKQSLMDGLGAKVSFHSLRITATDGEN 652



 Score = 41.2 bits (95), Expect = 0.91,   Method: Compositional matrix adjust.
 Identities = 54/191 (28%), Positives = 85/191 (44%), Gaps = 30/191 (15%)

Query: 56   ENLPVNYVLLTVTTNKP---RDLRVKYWLSNDYG-ERFSISRQ-GDISLMQCLDYETEDS 110
            E+ PV  +++TV+ +     RD  ++Y + +  G   F I  + G I     LD E+   
Sbjct: 1045 EDAPVGSLVMTVSAHDEDAGRDGEIRYSIRDGSGVGVFKIGEETGVIETSDRLDRESTSH 1104

Query: 111  YRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSV-IG 166
            Y  TV+ATD     +++   + I V +VND  P+   P   ++ P I   + +P  V + 
Sbjct: 1105 YWLTVFATDQGVVPLSSFIEIYIEVEDVNDNAPQTSEP---VYYPEI--MENSPKDVSVV 1159

Query: 167  KVEAADGDKGDRVTLSLRGPYEKMFSINDSGHISIVDLSALNTSTIQ-----------LV 215
            ++EA D D      L       K+ S N  G  SI   + L T+T +           L 
Sbjct: 1160 QIEAFDPDSSSNDKLMY-----KITSGNPQGFFSIHPKTGLITTTSRKLDREQQDEHILE 1214

Query: 216  VVATDTGNPPR 226
            V  TD G PP+
Sbjct: 1215 VTVTDNGIPPK 1225



 Score = 40.8 bits (94), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 56/195 (28%), Positives = 85/195 (43%), Gaps = 20/195 (10%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTTNKPRDL----RVKYWLSNDYGERFSI-SRQGDIS 98
            +F +  Y V   E+  V+  ++ V     +DL     V Y +  D  + FSI S  G + 
Sbjct: 821  EFLQESYFVEVSEDKEVHSEIIQVEATD-KDLGPNGHVTYSILTD-TDTFSIDSVTGVVR 878

Query: 99   LMQCLDYETEDSYRFTVYATDTL-----MTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
            + + LD E +  +   + A D       + ++  V +S+ +VND  P F  P Y + +  
Sbjct: 879  IARPLDRELQHEHYLKIEARDQAREEPQLFSTVVVKVSLEDVNDNPPTFIPPNYRVKV-- 936

Query: 154  IPLADLTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSIND-SGHISIVD-LSALNT 209
                DL  G+VI  +EA D D G   +V  SL    E  F ++  SG + IV  L     
Sbjct: 937  --REDLPEGTVIMWLEAHDPDLGQSGQVRYSLLDHGEGNFDVDKLSGAVRIVQPLDFEKK 994

Query: 210  STIQLVVVATDTGNP 224
                L V A D G P
Sbjct: 995  QVYNLTVRAKDKGKP 1009



 Score = 38.1 bits (87), Expect = 8.1,   Method: Compositional matrix adjust.
 Identities = 42/162 (25%), Positives = 72/162 (44%), Gaps = 14/162 (8%)

Query: 45   FSKNEYSVSALENLPVNY-VLLTVTTNKPRDLRVKYWL-----SNDYGERFSISRQGDIS 98
            FS+  YSV   EN PV + VL  V T++        +       ND  + F ++ QG + 
Sbjct: 3440 FSRGNYSVIIQENKPVGFSVLQLVVTDEDSSHNGPPFFFTIVTGNDE-KAFEVNPQGVLL 3498

Query: 99   LMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIP 155
                +  + +D Y   V   D     +++   ++I V+  + + P       E+F+    
Sbjct: 3499 TSSAIKRKEKDHYLLQVKVADNGKPQLSSLTYIDIRVIEESIYPPAIL--PLEIFI--TT 3554

Query: 156  LADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSG 197
              +   G VIGK+ A D D  D +T SL    + +FS++ +G
Sbjct: 3555 SGEEYSGGVIGKIHATDQDVYDTLTYSLDPQMDNLFSVSSTG 3596


>gi|218505775|ref|NP_001136235.1| protocadherin-15 isoform CD1-1 precursor [Homo sapiens]
          Length = 1962

 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 61/195 (31%), Positives = 100/195 (51%), Gaps = 14/195 (7%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGER-FSISRQ-GDISLMQ 101
           +F +  YS+   E + V  VLL +         + Y + N   +R F++S   G ++L +
Sbjct: 620 RFPQLMYSLEISEAMRVGAVLLNLQATDREGDSITYAIENGDPQRVFNLSETTGILTLGK 679

Query: 102 CLDYETEDSYRFTVYATDTL--MTTSATVNISVVNVNDWDPRFRYPQYELFLP-HIPLAD 158
            LD E+ D Y   + A+D     T++ATVNI V +VND  P F     + +LP ++ + +
Sbjct: 680 ALDRESTDRYILIITASDGRPDGTSTATVNIVVTDVNDNAPVF-----DPYLPRNLSVVE 734

Query: 159 LTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDSGHI-SIVDLSALNTSTIQLV 215
               + +G+V+A D D G   +V  SL G +  +F I  +G I + V L+       +LV
Sbjct: 735 EEANAFVGQVKATDPDAGINGQVHYSL-GNFNNLFRITSNGSIYTAVKLNREVRDYYELV 793

Query: 216 VVATDTGNPPRQASV 230
           VVATD    PR +++
Sbjct: 794 VVATDGAVHPRHSTL 808



 Score = 55.5 bits (132), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 62/241 (25%), Positives = 105/241 (43%), Gaps = 27/241 (11%)

Query: 6   DFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVN---- 61
           DF Q   LV++A Q +     A A L +     + +   F+   Y    LE+ PV     
Sbjct: 361 DFHQKFDLVIKAEQDNGHPLPAFAGLHIEILDENNQSPYFTMPSYQGYILESAPVGATIS 420

Query: 62  ----------YVLLTVTTNKPRDLRVKYWLSNDYGERFSISRQG---DISLMQCLDYETE 108
                      V L       +D  +  +L NDY   F++++ G    ++L+Q +D E +
Sbjct: 421 DSLNLTSPLRIVALDKDIEDTKDPELHLFL-NDYTSVFTVTQTGITRYLTLLQPVDREEQ 479

Query: 109 DSYRFTVYATDTLMTTSAT-VNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGK 167
            +Y F++ A D +  +    VNI V++ ND  P F    Y++++      D+ PG  + +
Sbjct: 480 QTYTFSITAFDGVQESEPVIVNIQVMDANDNTPTFPEISYDVYV----YTDMRPGDSVIQ 535

Query: 168 VEAADGDKGD--RVTLSLRGPYEKMFSIND-SGHISIV-DLSALNTSTIQLVVVATDTGN 223
           + A D D+G    +T  +    +  F IN  +G I+I   +  +   T  L V A D   
Sbjct: 536 LTAVDADEGSNGEITYEILVGAQGDFIINKTTGLITIAPGVEMIVGRTYALTVQAADNAP 595

Query: 224 P 224
           P
Sbjct: 596 P 596



 Score = 51.2 bits (121), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 71/233 (30%), Positives = 103/233 (44%), Gaps = 26/233 (11%)

Query: 13   LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKP 72
            LVV A       R++  TL +           F+ + Y+V   ENLP    +L +   K 
Sbjct: 792  LVVVATDGAVHPRHSTLTLAIKVLDIDDNSPVFTNSTYTVLVEENLPAGTTILQIEA-KD 850

Query: 73   RDL--RVKYWLSNDYGERFSISR--QGDISLMQCLDYET----EDSYRFTVYATD---TL 121
             DL   V Y + +   + F       G++SL++ LDYE     E S  F V A D   T+
Sbjct: 851  VDLGANVSYRIRSPEVKHFFALHPFTGELSLLRSLDYEAFPDQEASITFLVEAFDIYGTM 910

Query: 122  MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDK----GD 177
                ATV + V ++ND+ P F    Y+  +      D   G+ I  V A D D       
Sbjct: 911  PPGIATVTVIVKDMNDYPPVFSKRIYKGMV----APDAVKGTPITTVYAEDADPPGLPAS 966

Query: 178  RVTL---SLRGPY-EKMFSIN-DSGH-ISIVDLSALNTSTIQLVVVATDTGNP 224
            RV      ++ PY   +F +  DSG  I+ V+L+   T+  +LVVVA D G P
Sbjct: 967  RVRYRVDDVQFPYPASIFEVEEDSGRVITRVNLNEEPTTIFKLVVVAFDDGEP 1019



 Score = 46.6 bits (109), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 56/119 (47%), Gaps = 8/119 (6%)

Query: 76  RVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDTLMT---TSATVNISV 132
           +V Y L N +   F I+  G I     L+ E  D Y   V ATD  +    ++ T+ I V
Sbjct: 756 QVHYSLGN-FNNLFRITSNGSIYTAVKLNREVRDYYELVVVATDGAVHPRHSTLTLAIKV 814

Query: 133 VNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMF 191
           ++++D  P F    Y + +      +L  G+ I ++EA D D G  V+  +R P  K F
Sbjct: 815 LDIDDNSPVFTNSTYTVLVEE----NLPAGTTILQIEAKDVDLGANVSYRIRSPEVKHF 869


>gi|157649937|gb|ABV59362.1| protocadherin nu15 [Callorhinchus milii]
          Length = 988

 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 71/275 (25%), Positives = 124/275 (45%), Gaps = 34/275 (12%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTTNKP---RDLRVKYWLSNDYGERFSI-------SR 93
           +F++  Y+   +EN  +   + +VT   P    + R+ Y L     +  S+       ++
Sbjct: 452 RFAQPLYTAHVMENNVIGTSIYSVTALDPDANENSRLTYSLLESQVQNTSVFNYISVNAQ 511

Query: 94  QGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRF--RYPQYE 148
            GD+   +  DYE   S++  V A D     ++ + +VNI +++ ND  P      P++ 
Sbjct: 512 NGDVLSQRSFDYEQLKSFQIQVQAQDKGEPALSGNVSVNIIILDQNDNSPVIVSPLPEFG 571

Query: 149 LFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-DSGHI----S 200
             +         PG ++ KV A D D G    LS   ++     +F+I+ D+G I    S
Sbjct: 572 STVTETVSRLAEPGYLVAKVSAIDADTGQNGRLSYQIVQATDPGLFTISPDTGEIWTIRS 631

Query: 201 IVDLSALNTSTIQLVVVATDTGNPPRQASVPAIMH--------FPEAIVQQASSKLNSGT 252
           +VD  A   +  +LVVVA D G+P   A+V  ++           E  V      + SG 
Sbjct: 632 VVDKDA---NKQRLVVVAKDNGSPSLSATVTIMLSVVGGDAEMLSEVNVSMEDPWVTSGV 688

Query: 253 SSTVLIILGVVLIVLGFVIILLILYIHKNKHTKNN 287
           S  ++I LG    +   V+I+L + +HKN++   N
Sbjct: 689 SIYLVIALGTTSSIFLVVLIVLAVKVHKNRNGLGN 723



 Score = 43.9 bits (102), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 51/201 (25%), Positives = 88/201 (43%), Gaps = 22/201 (10%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRDL---RVKYWLSNDYGER----FSI-SRQGD 96
           F ++ Y VS LEN P   ++L +      D     + Y  S+    R    F++ S+ G+
Sbjct: 240 FPQSVYRVSLLENAPKGTLVLKLNATDLDDGPNGEIVYSFSSHTSARVRELFAVNSKTGE 299

Query: 97  ISLMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
           I +   LDYE   ++   V ATD     + T   V + V++VND       P+  L    
Sbjct: 300 IKVKGRLDYEENIAFEINVQATDKGPNAIPTYCHVLVDVIDVND-----NAPEITLTSLF 354

Query: 154 IPLADLT-PGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSGH-----ISIVDLSAL 207
            P+++ + PG+++  + A D D G    +  +      F ++ S       ++   L   
Sbjct: 355 SPVSEASRPGTLVALIGATDRDSGANGKVDCQILNHIPFKLDSSSKNYYRLVTSQLLDRE 414

Query: 208 NTSTIQLVVVATDTGNPPRQA 228
           NTST  + +  +D G+ P  A
Sbjct: 415 NTSTYDMTIACSDRGSSPLTA 435


>gi|410225470|gb|JAA09954.1| FAT tumor suppressor homolog 1 [Pan troglodytes]
 gi|410225472|gb|JAA09955.1| FAT tumor suppressor homolog 1 [Pan troglodytes]
          Length = 4588

 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 63/213 (29%), Positives = 104/213 (48%), Gaps = 18/213 (8%)

Query: 33   VSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTV-TTNKPRDL--RVKYWLSNDYG-ER 88
            V+  G +L    F +NEY V   EN P++ +++ V TT+    +   V Y + ND+  +R
Sbjct: 2480 VTVIGGNLHSPAFLQNEYEVELAENAPLHTLVMEVKTTDGDSGIYGHVTYHIVNDFAKDR 2539

Query: 89   FSISRQGDISLMQCLDYET--EDSYRFTVYATDTLMTTS-ATVNISVVNVNDWDPRFRYP 145
            F I+ +G I  ++ LD ET  E      + A D     +  TVN+ + + ND  P+FR  
Sbjct: 2540 FYINERGQIFTLEKLDRETPAEKVISVRLMAKDAGGKVAFCTVNVILTDDNDNAPQFRAT 2599

Query: 146  QYELFLPHIPLADLTPGSVIGKVEAADGDKGDR--VTLSLRGPYEKM---FSIND-SGHI 199
            +YE+ +     +    G+ + KV A+D D+G    +T ++    E +     IN  SG I
Sbjct: 2600 KYEVNIG----SSAAKGTSVIKVLASDADEGSNADITYAIEADSESVKENLEINKLSGVI 2655

Query: 200  SIVD-LSALNTSTIQLVVVATDTGNPPRQASVP 231
            +  + L  L        V A D G+P +++ VP
Sbjct: 2656 TTKESLIGLENEFFTFFVRAVDNGSPSKESVVP 2688



 Score = 61.2 bits (147), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 41/156 (26%), Positives = 77/156 (49%), Gaps = 11/156 (7%)

Query: 33   VSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWL---SNDYGERF 89
            +SK   S   + F ++ ++ + +E+ PV +++  ++   P    +  W      +Y   F
Sbjct: 1346 ISKPKPSPEPISFEESFFTFTVMESDPVAHMIGVISVEPPG---IPLWFDITGGNYDSHF 1402

Query: 90   SISR-QGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYE 148
             + R  G I + + LD E + +Y  TV ATD   T    V I V++ ND  P+F   +YE
Sbjct: 1403 DVDRGTGTIIVAKPLDAEQKSNYNLTVEATDGTTTILTQVFIKVIDTNDHRPQFSTSKYE 1462

Query: 149  LFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR 184
            + +P     D  P + I ++ A D D+ +++  +L+
Sbjct: 1463 VVIPE----DTAPETEILQISAVDQDEKNKLIYTLQ 1494



 Score = 58.2 bits (139), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 59/244 (24%), Positives = 106/244 (43%), Gaps = 40/244 (16%)

Query: 4    EDDFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYV 63
            E++F    T  VRA+   +  + ++  + V      ++  +FS+  Y+ +  E++P+   
Sbjct: 2665 ENEFF---TFFVRAVDNGSPSKESVVPVYVKILPPEMQLPKFSEPFYTFTVSEDVPIGTE 2721

Query: 64   LLTVTTNKPRDLRVKYWLSN----DYGERFSISRQ-GDISLMQCLDYETEDSYRFTVYAT 118
            +  +       +       N    +  E F I RQ G + L + LD+ET   Y+F++ A 
Sbjct: 2722 IDLIRAEHSGTVLYSLVKGNTPESNRDESFVIDRQSGRLKLEKSLDHETTKWYQFSILAR 2781

Query: 119  ----DTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGD 174
                D  M  S  V+I V + ND  P F    YE F+    + +L  GS + ++ A+D D
Sbjct: 2782 CTQDDHEMVASVDVSIQVKDANDNSPVFESSPYEAFI----VENLPGGSRVIQIRASDAD 2837

Query: 175  KGDRVTLSLRGPYEKMFSINDSGHISIVDLSALNTST----------------IQLVVVA 218
             G    +        M+S++ S  + +++  A+N  T                 Q+ VVA
Sbjct: 2838 SGTNGQV--------MYSLDQSQSVEVIESFAINMETGWITTLKELDHEKRDNYQIKVVA 2889

Query: 219  TDTG 222
            +D G
Sbjct: 2890 SDHG 2893



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 57/196 (29%), Positives = 94/196 (47%), Gaps = 23/196 (11%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSN-DYGERFSIS-RQGDISLMQC 102
            F K  YS    EN+ V+  ++ V  N P  L+V Y +++ D   +F+I+   G I+++  
Sbjct: 2182 FEKPFYSAEIAENIQVHSPVVHVQANSPEGLKVFYSITDGDPFSQFTINFNTGVINVIAP 2241

Query: 103  LDYETEDSYRFTVYATDTLMTTSATVNISVV--NVNDWDPRFRYPQYELFLPHIPLADLT 160
            LD+E   +Y+ ++ ATD+L    A V + ++  ++ND  P F    Y         A L+
Sbjct: 2242 LDFEAHPAYKLSIRATDSLTGAHAEVFVDIIVEDINDNPPVFAQQSY--------AATLS 2293

Query: 161  PGSVIG----KVEAADGDK--GDRVTLSLRGPYEK---MFSINDS-GHISIVD-LSALNT 209
              SVIG    +V A D D      ++  + G + K    F ++ S G IS++  L    +
Sbjct: 2294 EASVIGTSVVQVRATDSDSEPNRGISYQMFGNHSKSHDHFHVDSSTGLISLLRTLDYEQS 2353

Query: 210  STIQLVVVATDTGNPP 225
                + V A D G PP
Sbjct: 2354 RQHTIFVRAVDGGMPP 2369



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 61/225 (27%), Positives = 108/225 (48%), Gaps = 19/225 (8%)

Query: 13   LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVT---T 69
            L+VRA   D   R+  A+++++    +    +FS + Y+++  EN     +L  V     
Sbjct: 3095 LLVRAT--DGGGRFCQASVVLTLEDVNDNAPEFSADPYAITVFENTEPGTLLTRVQATDA 3152

Query: 70   NKPRDLRVKYWLSNDYGERFSISR-QGDISLMQCLDYETEDSYRFTVYATDT----LMTT 124
            +   + ++ Y L +    +FSI+   G I L + LD E +  Y  ++ A D      +T 
Sbjct: 3153 DAGLNRKILYSLIDSADGQFSINELSGIIQLEKPLDRELQAVYTLSLKAVDQGLPRRLTA 3212

Query: 125  SATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAA--DGDKGDRVTLS 182
            + TV +SV+++ND  P F Y +Y   +      D+  G+ + +V AA  D +    +T S
Sbjct: 3213 TGTVVVSVLDINDNPPVFEYREYGATVSE----DILVGTEVLQVYAASRDIEANAEITYS 3268

Query: 183  -LRGPYEKMFSIND-SGHISIVD-LSALNTSTIQLVVVATDTGNP 224
             + G     FSI+  +G + I++ L   ++    L V ATD G P
Sbjct: 3269 IISGNEHGKFSIDSKTGAVFIIENLDYESSHEYYLTVEATDGGTP 3313



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 44/145 (30%), Positives = 67/145 (46%), Gaps = 8/145 (5%)

Query: 90   SISRQGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYEL 149
            +I  +  + + + LD E  D+Y  T+ ATD   ++ A V + V++ ND  P      Y  
Sbjct: 2971 NIQNEWKVYVKKPLDREKRDNYLLTITATDGTFSSKAIVEVKVLDANDNSPVCEKTLYSD 3030

Query: 150  FLPHIPLADLTPGSVIGKVEAADGD--KGDRVTLSLRGPYEKMFSIN-DSGHISI-VDLS 205
              P     D+ PG +I +V A D D      +T +L G   + F +N D+G +     L 
Sbjct: 3031 TTPE----DVLPGKLILQVSATDADIRSNAEITYTLLGSGAEKFKLNPDTGELKTSTPLD 3086

Query: 206  ALNTSTIQLVVVATDTGNPPRQASV 230
                +   L+V ATD G    QASV
Sbjct: 3087 REEQAVYHLLVRATDGGGRFCQASV 3111



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 60/215 (27%), Positives = 101/215 (46%), Gaps = 21/215 (9%)

Query: 27   ALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLS---- 82
            A  T++VS    +     F   EY  +  E++ V   +L V     RD+     ++    
Sbjct: 3212 ATGTVVVSVLDINDNPPVFEYREYGATVSEDILVGTEVLQVYAAS-RDIEANAEITYSII 3270

Query: 83   --NDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVN 136
              N++G +FSI S+ G + +++ LDYE+   Y  TV ATD     ++  ATVN++V ++N
Sbjct: 3271 SGNEHG-KFSIDSKTGAVFIIENLDYESSHEYYLTVEATDGGTPSLSDVATVNVNVTDIN 3329

Query: 137  DWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS-LRGPYEKMFSIND 195
            D  P F    Y   +    + + +  +V+   + ADG     +  S + G     F+I+ 
Sbjct: 3330 DNTPVFSQDTYTTVISEDAVLEQSVITVMA--DDADGPSNSHIHYSIIDGNQGSSFTIDP 3387

Query: 196  -SGHISIVDLSALNTSTIQ---LVVVATDTGNPPR 226
              G + +  L  L+   I    L V A+D G+PPR
Sbjct: 3388 VRGEVKVTKL--LDREMISGYTLTVQASDNGSPPR 3420



 Score = 43.1 bits (100), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 55/215 (25%), Positives = 91/215 (42%), Gaps = 19/215 (8%)

Query: 24  DRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLR---VKYW 80
           DR A   ++V   G +    +F++  Y  +  EN+P+   +++++   P +     V Y 
Sbjct: 442 DRKASTKVLVKVLGANSNPPEFTQTAYKAAFDENVPIGTTVMSLSAVDPDEGENGYVTYS 501

Query: 81  LSNDYGERFSISR-QGDISLMQCLDYE-TEDSYRFTVYATDTLMTTSATVN----ISVVN 134
           ++N     F+I    G +S  + LDYE     Y   + A+D  +     V     I++ N
Sbjct: 502 IANLNHVPFAIDHFTGAVSTSENLDYELMPRVYTLRIRASDWGLPYRREVEVLATITLNN 561

Query: 135 VNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYE-KMFSI 193
           +ND  P F     E  +P     DL  G  I  V A D D+   V   +    E  +FS+
Sbjct: 562 LNDNTPLFEKINCEGTIPR----DLGVGEQITTVSAIDADELQLVQYQIEAGNELDLFSL 617

Query: 194 NDSGHI-----SIVDLSALNTSTIQLVVVATDTGN 223
           N +  +     S++D      S   L + ATD  N
Sbjct: 618 NPNSGVLSLKQSLMDGLGAKVSFHSLRITATDGEN 652



 Score = 41.2 bits (95), Expect = 0.91,   Method: Compositional matrix adjust.
 Identities = 54/191 (28%), Positives = 85/191 (44%), Gaps = 30/191 (15%)

Query: 56   ENLPVNYVLLTVTTNKP---RDLRVKYWLSNDYG-ERFSISRQ-GDISLMQCLDYETEDS 110
            E+ PV  +++TV+ +     RD  ++Y + +  G   F I  + G I     LD E+   
Sbjct: 1045 EDAPVGSLVMTVSAHDEDAGRDGEIRYSIRDGSGVGVFKIGEETGVIETSDRLDRESTSH 1104

Query: 111  YRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSV-IG 166
            Y  TV+ATD     +++   + I V +VND  P+   P   ++ P I   + +P  V + 
Sbjct: 1105 YWLTVFATDQGVVPLSSFIEIYIEVEDVNDNAPQTSEP---VYYPEI--MENSPKDVSVV 1159

Query: 167  KVEAADGDKGDRVTLSLRGPYEKMFSINDSGHISIVDLSALNTSTIQ-----------LV 215
            ++EA D D      L       K+ S N  G  SI   + L T+T +           L 
Sbjct: 1160 QIEAFDPDSSSNDKLMY-----KITSGNPQGFFSIHPKTGLITTTSRKLDREQQDEHILE 1214

Query: 216  VVATDTGNPPR 226
            V  TD G PP+
Sbjct: 1215 VTVTDNGIPPK 1225



 Score = 40.8 bits (94), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 56/195 (28%), Positives = 85/195 (43%), Gaps = 20/195 (10%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTTNKPRDL----RVKYWLSNDYGERFSI-SRQGDIS 98
            +F +  Y V   E+  V+  ++ V     +DL     V Y +  D  + FSI S  G + 
Sbjct: 821  EFLQESYFVEVSEDKEVHSEIIQVEATD-KDLGPNGHVTYSILTD-TDTFSIDSVTGVVR 878

Query: 99   LMQCLDYETEDSYRFTVYATDTL-----MTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
            + + LD E +  +   + A D       + ++  V +S+ +VND  P F  P Y + +  
Sbjct: 879  IARPLDRELQHEHYLKIEARDQAREEPQLFSTVVVKVSLEDVNDNPPTFIPPNYRVKV-- 936

Query: 154  IPLADLTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSIND-SGHISIVD-LSALNT 209
                DL  G+VI  +EA D D G   +V  SL    E  F ++  SG + IV  L     
Sbjct: 937  --REDLPEGTVIMWLEAHDPDLGQSGQVRYSLLDHGEGNFDVDKLSGAVRIVQPLDFEKK 994

Query: 210  STIQLVVVATDTGNP 224
                L V A D G P
Sbjct: 995  QVYNLTVRAKDKGKP 1009



 Score = 37.7 bits (86), Expect = 8.3,   Method: Compositional matrix adjust.
 Identities = 42/162 (25%), Positives = 72/162 (44%), Gaps = 14/162 (8%)

Query: 45   FSKNEYSVSALENLPVNY-VLLTVTTNKPRDLRVKYWL-----SNDYGERFSISRQGDIS 98
            FS+  YSV   EN PV + VL  V T++        +       ND  + F ++ QG + 
Sbjct: 3440 FSRGNYSVIIQENKPVGFSVLQLVVTDEDSSHNGPPFFFTIVTGNDE-KAFEVNPQGVLL 3498

Query: 99   LMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIP 155
                +  + +D Y   V   D     +++   ++I V+  + + P       E+F+    
Sbjct: 3499 TSSAIKRKEKDHYLLQVKVADNGKPQLSSLTYIDIRVIEESIYPPAIL--PLEIFI--TT 3554

Query: 156  LADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSG 197
              +   G VIGK+ A D D  D +T SL    + +FS++ +G
Sbjct: 3555 SGEEYSGGVIGKIHATDQDVYDTLTYSLDPQMDNLFSVSSTG 3596


>gi|380018274|ref|XP_003693057.1| PREDICTED: cadherin-87A-like [Apis florea]
          Length = 1880

 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 71/243 (29%), Positives = 106/243 (43%), Gaps = 46/243 (18%)

Query: 11  ITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTN 70
           I LVV    + +    + AT+ VS    +     FS   Y+   LE  P    ++T+T  
Sbjct: 455 IILVVAEEVHTDPKLSSTATVTVSITDANDNSPTFSNPTYTAVVLETAPPGTPVITITA- 513

Query: 71  KPRD------LRVKYWLSNDYGERFSISRQGDISLMQ---------CLDYETEDSYRFTV 115
           K RD        + Y L     + FS+ R+  I  +          CLDYE +  Y  T 
Sbjct: 514 KDRDSGRFGTAGIAYQLLGQGAQHFSVDRKSGIITVAPCANPGTSPCLDYEEQTEYFLTY 573

Query: 116 YATD---TLMTTSATVNISVVNVNDWDPRFRYPQY--------ELFLPHIPLADLTPGSV 164
            ATD      TTS ++ IS+ + ND  PRF   +Y        E F P +          
Sbjct: 574 KATDDDGQGQTTSVSLRISLSDANDSPPRFLQDKYRAVIDEGAEKFEPDL---------- 623

Query: 165 IGKVEAADGDKGDRVTLSLRGPYE-KMFSIN-DSGHISI-----VDLSALNTSTIQLVVV 217
             KV+A D DK  ++T ++ G  +  +F+I+ D+G I+I     VDL+      I LV+ 
Sbjct: 624 --KVQARDKDKTSKITYAIVGGDDLDLFAIDQDTGEITIKNKGPVDLTNSTHDWIALVIQ 681

Query: 218 ATD 220
           A+D
Sbjct: 682 ASD 684



 Score = 58.5 bits (140), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 47/153 (30%), Positives = 81/153 (52%), Gaps = 15/153 (9%)

Query: 95   GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFL 151
            G +   Q +DYE      FTV A D+    ++ +  V ++V+NVND DP+F   + EL+ 
Sbjct: 988  GIVRTSQVIDYEETKQLEFTVVAYDSGVPQLSATTKVIVTVINVNDQDPKF---EKELYN 1044

Query: 152  PHIPLADLTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSI-NDSGHISIVDLSALN 208
              +   +  PG+ +  V+A DGD+G    V+ SL G +   F+I +++G I++   + L+
Sbjct: 1045 ASVK-ENSPPGTHVTVVKATDGDEGSFGEVSYSLIGDHAADFNIGHETGEITVGSAAVLD 1103

Query: 209  ---TSTIQLVVVATDTG--NPPRQASVPAIMHF 236
               T  I + V+A+D    N  R  +VP ++  
Sbjct: 1104 REITPNITITVMASDGAHINSRRSTTVPVVVKL 1136



 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 47/152 (30%), Positives = 72/152 (47%), Gaps = 17/152 (11%)

Query: 79  YWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDW 138
           + +  D GE  +I  +G + L       T D     + A+D +   SA VNI++ +VN+ 
Sbjct: 649 FAIDQDTGE-ITIKNKGPVDLTNS----THDWIALVIQASDGIFVDSAIVNITIRDVNNN 703

Query: 139 DPRFRYPQYELFLPHI-PLADLTPGSVIGKVEAADGDKGDRVTLSLR---GPYEKMFSIN 194
            P F +  Y   LP I P+     G+V+ +V A D D G    L  R   G ++  F+IN
Sbjct: 704 APIFPHELYTASLPEISPI-----GTVVEEVTATDADTGINAELVYRIQKGAFDD-FTIN 757

Query: 195 DSGHISIV--DLSALNTSTIQLVVVATDTGNP 224
           ++  I  V   L   N +T  + V+A D G P
Sbjct: 758 ETTGIVTVFRKLDYDNKNTYHVEVIAFDKGTP 789



 Score = 41.2 bits (95), Expect = 0.91,   Method: Compositional matrix adjust.
 Identities = 54/199 (27%), Positives = 84/199 (42%), Gaps = 19/199 (9%)

Query: 45   FSKNEYSVSALENLPVN---YVLLTVTTNKPRDLRVKYWLSNDYG---ERFSISRQGDIS 98
            F+++ Y  S  ENLPVN    +L     +    +  + W +  +G   E FS++ +  I 
Sbjct: 1146 FTQHSYRASVAENLPVNPPAPILQVRAVDHDEGINGEVWYTIIHGNENESFSLNHETGIL 1205

Query: 99   LMQCLDYETEDSYRFTVYATDTL----MTTSATVNISVVNVNDWDPRFRYPQYELFLPHI 154
                       SYR  V A D       +    V+I V  VN   P+F  P+       +
Sbjct: 1206 YPGAALLGRAGSYRIEVEARDGAGNGPHSDKCYVDIRVTPVNQHKPQFVLPELTNATVEV 1265

Query: 155  PLADLTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKM-----FSIN-DSGHI-SIVDLS 205
            P        +I  V+A D D G+  RV+  L+     +     FSI+ ++G + S + L 
Sbjct: 1266 PENTGVLNYLILTVKAIDRDPGENGRVSYHLKVGNRNIQETEEFSIDQETGELRSKIILD 1325

Query: 206  ALNTSTIQLVVVATDTGNP 224
                S  +LV+VA D G P
Sbjct: 1326 REVKSKFELVLVAADHGTP 1344



 Score = 39.3 bits (90), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 60/275 (21%), Positives = 109/275 (39%), Gaps = 61/275 (22%)

Query: 11   ITLVVRAIQYDNQDRYALATLIVSKAGTSL---------------RELQFSKNEYSVSAL 55
            I  V R + YDN++ Y +  +   K   SL               +   F+         
Sbjct: 762  IVTVFRKLDYDNKNTYHVEVIAFDKGTPSLTGTTTLMINVENSNDKAPYFTPETQRAEVT 821

Query: 56   ENLPVNYVLLTVTTNKPRDLRVK---YWLS-------------ND---YGERFSISRQ-G 95
            E+ P+  V  T+    P    V+   + +S             ND   + + F++ R  G
Sbjct: 822  EDTPIGTVFTTLKATDPDSTNVEALNFAISEPITAIDRNGQQVNDSKSFKDFFAVDRATG 881

Query: 96   DISLMQCLDYETEDSYRFTVYATDT----LMTTSATVNISVVNVNDWDPRFRYP---QYE 148
             +S+++ LD +   +   TV  +DT    L     T+ +++++VN   P F  P   +  
Sbjct: 882  QVSVVRSLDRDIAATVSITVVVSDTTAPTLQQGRGTLVVTIIDVNHMAPEFLKPWTRENP 941

Query: 149  LFLPHIPLADLTP-GSVIGKVEAADGDKGDRVTLSLRG----PYEKMFSINDSGHI---- 199
             +L  I + +  P G+++G   A D D       ++ G    P    F+I++   I    
Sbjct: 942  RYL--IEMQEEQPTGAIVGAFTAVDADS------NIAGYAIIPPSPYFNIDNVTGIVRTS 993

Query: 200  SIVDLSALNTSTIQLVVVATDTGNPPRQASVPAIM 234
             ++D     T  ++  VVA D+G P   A+   I+
Sbjct: 994  QVIDYE--ETKQLEFTVVAYDSGVPQLSATTKVIV 1026



 Score = 39.3 bits (90), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 33/120 (27%), Positives = 54/120 (45%), Gaps = 15/120 (12%)

Query: 102 CLDYETEDSYRFTVYA------TDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIP 155
            LDYE  +  +F +        TD  ++++ATV +S+ + ND  P F  P Y   +    
Sbjct: 443 SLDYENPNQRKFIILVVAEEVHTDPKLSSTATVTVSITDANDNSPTFSNPTYTAVV---- 498

Query: 156 LADLTPGSVIGKVEAADGDKGD----RVTLSLRGPYEKMFSIN-DSGHISIVDLSALNTS 210
           L    PG+ +  + A D D G      +   L G   + FS++  SG I++   +   TS
Sbjct: 499 LETAPPGTPVITITAKDRDSGRFGTAGIAYQLLGQGAQHFSVDRKSGIITVAPCANPGTS 558


>gi|410267946|gb|JAA21939.1| FAT tumor suppressor homolog 1 [Pan troglodytes]
          Length = 4588

 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 63/213 (29%), Positives = 104/213 (48%), Gaps = 18/213 (8%)

Query: 33   VSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTV-TTNKPRDL--RVKYWLSNDYG-ER 88
            V+  G +L    F +NEY V   EN P++ +++ V TT+    +   V Y + ND+  +R
Sbjct: 2480 VTVIGGNLHSPAFLQNEYEVELAENAPLHTLVMEVKTTDGDSGIYGHVTYHIVNDFAKDR 2539

Query: 89   FSISRQGDISLMQCLDYET--EDSYRFTVYATDTLMTTS-ATVNISVVNVNDWDPRFRYP 145
            F I+ +G I  ++ LD ET  E      + A D     +  TVN+ + + ND  P+FR  
Sbjct: 2540 FYINERGQIFTLEKLDRETPAEKVISVRLMAKDAGGKVAFCTVNVILTDDNDNAPQFRAT 2599

Query: 146  QYELFLPHIPLADLTPGSVIGKVEAADGDKGDR--VTLSLRGPYEKM---FSIND-SGHI 199
            +YE+ +     +    G+ + KV A+D D+G    +T ++    E +     IN  SG I
Sbjct: 2600 KYEVNIG----SSAAKGTSVIKVLASDADEGSNADITYAIEADSESVKENLEINKLSGVI 2655

Query: 200  SIVD-LSALNTSTIQLVVVATDTGNPPRQASVP 231
            +  + L  L        V A D G+P +++ VP
Sbjct: 2656 TTKESLIGLENEFFTFFVRAVDNGSPSKESVVP 2688



 Score = 61.2 bits (147), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 41/156 (26%), Positives = 77/156 (49%), Gaps = 11/156 (7%)

Query: 33   VSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWL---SNDYGERF 89
            +SK   S   + F ++ ++ + +E+ PV +++  ++   P    +  W      +Y   F
Sbjct: 1346 ISKPKPSPEPISFEESFFTFTVMESDPVAHMIGVISVEPPG---IPLWFDITGGNYDSHF 1402

Query: 90   SISR-QGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYE 148
             + R  G I + + LD E + +Y  TV ATD   T    V I V++ ND  P+F   +YE
Sbjct: 1403 DVDRGTGTIIVAKPLDAEQKSNYNLTVEATDGTTTILTQVFIKVIDTNDHRPQFSTSKYE 1462

Query: 149  LFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR 184
            + +P     D  P + I ++ A D D+ +++  +L+
Sbjct: 1463 VVIPE----DTAPETEILQISAVDQDEKNKLIYTLQ 1494



 Score = 58.2 bits (139), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 59/244 (24%), Positives = 106/244 (43%), Gaps = 40/244 (16%)

Query: 4    EDDFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYV 63
            E++F    T  VRA+   +  + ++  + V      ++  +FS+  Y+ +  E++P+   
Sbjct: 2665 ENEFF---TFFVRAVDNGSPSKESVVPVYVKILPPEMQLPKFSEPFYTFTVSEDVPIGTE 2721

Query: 64   LLTVTTNKPRDLRVKYWLSN----DYGERFSISRQ-GDISLMQCLDYETEDSYRFTVYAT 118
            +  +       +       N    +  E F I RQ G + L + LD+ET   Y+F++ A 
Sbjct: 2722 IDLIRAEHSGTVLYSLVKGNTPESNRDESFVIDRQSGRLKLEKSLDHETTKWYQFSILAR 2781

Query: 119  ----DTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGD 174
                D  M  S  V+I V + ND  P F    YE F+    + +L  GS + ++ A+D D
Sbjct: 2782 CTQDDHEMVASVDVSIQVKDANDNSPVFESSPYEAFI----VENLPGGSRVIQIRASDAD 2837

Query: 175  KGDRVTLSLRGPYEKMFSINDSGHISIVDLSALNTST----------------IQLVVVA 218
             G    +        M+S++ S  + +++  A+N  T                 Q+ VVA
Sbjct: 2838 SGTNGQV--------MYSLDQSQSVEVIESFAINMETGWITTLKELDHEKRDNYQIKVVA 2889

Query: 219  TDTG 222
            +D G
Sbjct: 2890 SDHG 2893



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 57/196 (29%), Positives = 94/196 (47%), Gaps = 23/196 (11%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSN-DYGERFSIS-RQGDISLMQC 102
            F K  YS    EN+ V+  ++ V  N P  L+V Y +++ D   +F+I+   G I+++  
Sbjct: 2182 FEKPFYSAEIAENIQVHSPVVHVQANSPEGLKVFYSITDGDPFSQFTINFNTGVINVIAP 2241

Query: 103  LDYETEDSYRFTVYATDTLMTTSATVNISVV--NVNDWDPRFRYPQYELFLPHIPLADLT 160
            LD+E   +Y+ ++ ATD+L    A V + ++  ++ND  P F    Y         A L+
Sbjct: 2242 LDFEAHPAYKLSIRATDSLTGAHAEVFVDIIVEDINDNPPVFAQQSY--------AATLS 2293

Query: 161  PGSVIG----KVEAADGDK--GDRVTLSLRGPYEK---MFSINDS-GHISIVD-LSALNT 209
              SVIG    +V A D D      ++  + G + K    F ++ S G IS++  L    +
Sbjct: 2294 EASVIGTSVVQVRATDSDSEPNRGISYQMFGNHSKSHDHFHVDSSTGLISLLRTLDYEQS 2353

Query: 210  STIQLVVVATDTGNPP 225
                + V A D G PP
Sbjct: 2354 RQHTIFVRAVDGGMPP 2369



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 61/225 (27%), Positives = 108/225 (48%), Gaps = 19/225 (8%)

Query: 13   LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVT---T 69
            L+VRA   D   R+  A+++++    +    +FS + Y+++  EN     +L  V     
Sbjct: 3095 LLVRAT--DGGGRFCQASVVLTLEDVNDNAPEFSADPYAITVFENTEPGTLLTRVQATDA 3152

Query: 70   NKPRDLRVKYWLSNDYGERFSISR-QGDISLMQCLDYETEDSYRFTVYATDT----LMTT 124
            +   + ++ Y L +    +FSI+   G I L + LD E +  Y  ++ A D      +T 
Sbjct: 3153 DAGLNRKILYSLIDSADGQFSINELSGIIQLEKPLDRELQAVYTLSLKAVDQGLPRRLTA 3212

Query: 125  SATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAA--DGDKGDRVTLS 182
            + TV +SV+++ND  P F Y +Y   +      D+  G+ + +V AA  D +    +T S
Sbjct: 3213 TGTVVVSVLDINDNPPVFEYREYGATVSE----DILVGTEVLQVYAASRDIEANAEITYS 3268

Query: 183  -LRGPYEKMFSIND-SGHISIVD-LSALNTSTIQLVVVATDTGNP 224
             + G     FSI+  +G + I++ L   ++    L V ATD G P
Sbjct: 3269 IISGNEHGKFSIDSKTGAVFIIENLDYESSHEYYLTVEATDGGTP 3313



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 44/145 (30%), Positives = 67/145 (46%), Gaps = 8/145 (5%)

Query: 90   SISRQGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYEL 149
            +I  +  + + + LD E  D+Y  T+ ATD   ++ A V + V++ ND  P      Y  
Sbjct: 2971 NIQNEWKVYVKKPLDREKRDNYLLTITATDGTFSSKAIVEVKVLDANDNSPVCEKTLYSD 3030

Query: 150  FLPHIPLADLTPGSVIGKVEAADGD--KGDRVTLSLRGPYEKMFSIN-DSGHISI-VDLS 205
              P     D+ PG +I +V A D D      +T +L G   + F +N D+G +     L 
Sbjct: 3031 TTPE----DVLPGKLILQVSATDADIRSNAEITYTLLGSGAEKFKLNPDTGELKTSTPLD 3086

Query: 206  ALNTSTIQLVVVATDTGNPPRQASV 230
                +   L+V ATD G    QASV
Sbjct: 3087 REEQAVYHLLVRATDGGGRFCQASV 3111



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 60/215 (27%), Positives = 101/215 (46%), Gaps = 21/215 (9%)

Query: 27   ALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLS---- 82
            A  T++VS    +     F   EY  +  E++ V   +L V     RD+     ++    
Sbjct: 3212 ATGTVVVSVLDINDNPPVFEYREYGATVSEDILVGTEVLQVYAAS-RDIEANAEITYSII 3270

Query: 83   --NDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVN 136
              N++G +FSI S+ G + +++ LDYE+   Y  TV ATD     ++  ATVN++V ++N
Sbjct: 3271 SGNEHG-KFSIDSKTGAVFIIENLDYESSHEYYLTVEATDGGTPSLSDVATVNVNVTDIN 3329

Query: 137  DWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS-LRGPYEKMFSIND 195
            D  P F    Y   +    + + +  +V+   + ADG     +  S + G     F+I+ 
Sbjct: 3330 DNTPVFSQDTYTTVISEDAVLEQSVITVMA--DDADGPSNSHIHYSIIDGNQGSSFTIDP 3387

Query: 196  -SGHISIVDLSALNTSTIQ---LVVVATDTGNPPR 226
              G + +  L  L+   I    L V A+D G+PPR
Sbjct: 3388 VRGEVKVTKL--LDREMISGYTLTVQASDNGSPPR 3420



 Score = 43.1 bits (100), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 55/215 (25%), Positives = 91/215 (42%), Gaps = 19/215 (8%)

Query: 24  DRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLR---VKYW 80
           DR A   ++V   G +    +F++  Y  +  EN+P+   +++++   P +     V Y 
Sbjct: 442 DRKASTKVLVKVLGANSNPPEFTQTAYKAAFDENVPIGTTVMSLSAVDPDEGENGYVTYS 501

Query: 81  LSNDYGERFSISR-QGDISLMQCLDYE-TEDSYRFTVYATDTLMTTSATVN----ISVVN 134
           ++N     F+I    G +S  + LDYE     Y   + A+D  +     V     I++ N
Sbjct: 502 IANLNHVPFAIDHFTGAVSTSENLDYELMPRVYTLRIRASDWGLPYRREVEVLATITLNN 561

Query: 135 VNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYE-KMFSI 193
           +ND  P F     E  +P     DL  G  I  V A D D+   V   +    E  +FS+
Sbjct: 562 LNDNTPLFEKINCEGTIPR----DLGVGEQITTVSAIDADELQLVQYQIEAGNELDLFSL 617

Query: 194 NDSGHI-----SIVDLSALNTSTIQLVVVATDTGN 223
           N +  +     S++D      S   L + ATD  N
Sbjct: 618 NPNSGVLSLKQSLMDGLGAKVSFHSLRITATDGEN 652



 Score = 41.2 bits (95), Expect = 0.90,   Method: Compositional matrix adjust.
 Identities = 54/191 (28%), Positives = 85/191 (44%), Gaps = 30/191 (15%)

Query: 56   ENLPVNYVLLTVTTNKP---RDLRVKYWLSNDYG-ERFSISRQ-GDISLMQCLDYETEDS 110
            E+ PV  +++TV+ +     RD  ++Y + +  G   F I  + G I     LD E+   
Sbjct: 1045 EDAPVGSLVMTVSAHDEDAGRDGEIRYSIRDGSGVGVFKIGEETGVIETSDRLDRESTSH 1104

Query: 111  YRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSV-IG 166
            Y  TV+ATD     +++   + I V +VND  P+   P   ++ P I   + +P  V + 
Sbjct: 1105 YWLTVFATDQGVVPLSSFIEIYIEVEDVNDNAPQTSEP---VYYPEI--MENSPKDVSVV 1159

Query: 167  KVEAADGDKGDRVTLSLRGPYEKMFSINDSGHISIVDLSALNTSTIQ-----------LV 215
            ++EA D D      L       K+ S N  G  SI   + L T+T +           L 
Sbjct: 1160 QIEAFDPDSSSNDKLMY-----KITSGNPQGFFSIHPKTGLITTTSRKLDREQQDEHILE 1214

Query: 216  VVATDTGNPPR 226
            V  TD G PP+
Sbjct: 1215 VTVTDNGIPPK 1225



 Score = 40.8 bits (94), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 56/195 (28%), Positives = 85/195 (43%), Gaps = 20/195 (10%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTTNKPRDL----RVKYWLSNDYGERFSI-SRQGDIS 98
            +F +  Y V   E+  V+  ++ V     +DL     V Y +  D  + FSI S  G + 
Sbjct: 821  EFLQESYFVEVSEDKEVHSEIIQVEATD-KDLGPNGHVTYSILTD-TDTFSIDSVTGVVR 878

Query: 99   LMQCLDYETEDSYRFTVYATDTL-----MTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
            + + LD E +  +   + A D       + ++  V +S+ +VND  P F  P Y + +  
Sbjct: 879  IARPLDRELQHEHYLKIEARDQAREEPQLFSTVVVKVSLEDVNDNPPTFIPPNYRVKV-- 936

Query: 154  IPLADLTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSIND-SGHISIVD-LSALNT 209
                DL  G+VI  +EA D D G   +V  SL    E  F ++  SG + IV  L     
Sbjct: 937  --REDLPEGTVIMWLEAHDPDLGQSGQVRYSLLDHGEGNFDVDKLSGAVRIVQPLDFEKK 994

Query: 210  STIQLVVVATDTGNP 224
                L V A D G P
Sbjct: 995  QVYNLTVRAKDKGKP 1009



 Score = 38.1 bits (87), Expect = 8.2,   Method: Compositional matrix adjust.
 Identities = 42/162 (25%), Positives = 72/162 (44%), Gaps = 14/162 (8%)

Query: 45   FSKNEYSVSALENLPVNY-VLLTVTTNKPRDLRVKYWL-----SNDYGERFSISRQGDIS 98
            FS+  YSV   EN PV + VL  V T++        +       ND  + F ++ QG + 
Sbjct: 3440 FSRGNYSVIIQENKPVGFSVLQLVVTDEDSSHNGPPFFFTIVTGNDE-KAFEVNPQGVLL 3498

Query: 99   LMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIP 155
                +  + +D Y   V   D     +++   ++I V+  + + P       E+F+    
Sbjct: 3499 TSSAIKRKEKDHYLLQVKVADNGKPQLSSLTYIDIRVIEESIYPPAIL--PLEIFI--TT 3554

Query: 156  LADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSG 197
              +   G VIGK+ A D D  D +T SL    + +FS++ +G
Sbjct: 3555 SGEEYSGGVIGKIHATDQDVYDTLTYSLDPQMDNLFSVSSTG 3596


>gi|119574537|gb|EAW54152.1| protocadherin 15, isoform CRA_b [Homo sapiens]
          Length = 1954

 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 61/195 (31%), Positives = 100/195 (51%), Gaps = 14/195 (7%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGER-FSISRQ-GDISLMQ 101
           +F +  YS+   E + V  VLL +         + Y + N   +R F++S   G ++L +
Sbjct: 617 RFPQLMYSLEISEAMRVGAVLLNLQATDREGDSITYAIENGDPQRVFNLSETTGILTLGK 676

Query: 102 CLDYETEDSYRFTVYATDTL--MTTSATVNISVVNVNDWDPRFRYPQYELFLP-HIPLAD 158
            LD E+ D Y   + A+D     T++ATVNI V +VND  P F     + +LP ++ + +
Sbjct: 677 ALDRESTDRYILIITASDGRPDGTSTATVNIVVTDVNDNAPVF-----DPYLPRNLSVVE 731

Query: 159 LTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDSGHI-SIVDLSALNTSTIQLV 215
               + +G+V+A D D G   +V  SL G +  +F I  +G I + V L+       +LV
Sbjct: 732 EEANAFVGQVKATDPDAGINGQVHYSL-GNFNNLFRITSNGSIYTAVKLNREVRDYYELV 790

Query: 216 VVATDTGNPPRQASV 230
           VVATD    PR +++
Sbjct: 791 VVATDGAVHPRHSTL 805



 Score = 51.6 bits (122), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 62/243 (25%), Positives = 106/243 (43%), Gaps = 29/243 (11%)

Query: 6   DFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVN---- 61
           DF Q   LV++A Q +     A A L +     + +   F+   Y    LE+ PV     
Sbjct: 356 DFHQKFDLVIKAEQDNGHPLPAFAGLHIEILDENNQSPYFTMPSYQGYILESAPVGATIS 415

Query: 62  ----------YVLLTVTTNKPRDLRVKYWLSNDYGERFSISRQG---DISLMQCLDYETE 108
                      V L       +D  +  +L NDY   F++++ G    ++L+Q +D E +
Sbjct: 416 DSLNLTSPLRIVALDKDIEDTKDPELHLFL-NDYTSVFTVTQTGITRYLTLLQPVDREEQ 474

Query: 109 DSYRFTV--YATDTLMTTSAT-VNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVI 165
            +Y F+V  ++ D +  +    VNI V++ ND  P F    Y++++      D+ PG  +
Sbjct: 475 QTYTFSVKSFSFDGVQESEPVIVNIQVMDANDNTPTFPEISYDVYV----YTDMRPGDSV 530

Query: 166 GKVEAADGDKGD--RVTLSLRGPYEKMFSIND-SGHISIV-DLSALNTSTIQLVVVATDT 221
            ++ A D D+G    +T  +    +  F IN  +G I+I   +  +   T  L V A D 
Sbjct: 531 IQLTAVDADEGSNGEITYEILVGAQGDFIINKTTGLITIAPGVEMIVGRTYALTVQAADN 590

Query: 222 GNP 224
             P
Sbjct: 591 APP 593



 Score = 51.2 bits (121), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 71/233 (30%), Positives = 103/233 (44%), Gaps = 26/233 (11%)

Query: 13   LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKP 72
            LVV A       R++  TL +           F+ + Y+V   ENLP    +L +   K 
Sbjct: 789  LVVVATDGAVHPRHSTLTLAIKVLDIDDNSPVFTNSTYTVLVEENLPAGTTILQIEA-KD 847

Query: 73   RDL--RVKYWLSNDYGERFSISR--QGDISLMQCLDYET----EDSYRFTVYATD---TL 121
             DL   V Y + +   + F       G++SL++ LDYE     E S  F V A D   T+
Sbjct: 848  VDLGANVSYRIRSPEVKHFFALHPFTGELSLLRSLDYEAFPDQEASITFLVEAFDIYGTM 907

Query: 122  MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDK----GD 177
                ATV + V ++ND+ P F    Y+  +      D   G+ I  V A D D       
Sbjct: 908  PPGIATVTVIVKDMNDYPPVFSKRIYKGMV----APDAVKGTPITTVYAEDADPPGLPAS 963

Query: 178  RVTL---SLRGPY-EKMFSIN-DSGH-ISIVDLSALNTSTIQLVVVATDTGNP 224
            RV      ++ PY   +F +  DSG  I+ V+L+   T+  +LVVVA D G P
Sbjct: 964  RVRYRVDDVQFPYPASIFEVEEDSGRVITRVNLNEEPTTIFKLVVVAFDDGEP 1016



 Score = 46.6 bits (109), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 56/119 (47%), Gaps = 8/119 (6%)

Query: 76  RVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDTLMT---TSATVNISV 132
           +V Y L N +   F I+  G I     L+ E  D Y   V ATD  +    ++ T+ I V
Sbjct: 753 QVHYSLGN-FNNLFRITSNGSIYTAVKLNREVRDYYELVVVATDGAVHPRHSTLTLAIKV 811

Query: 133 VNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMF 191
           ++++D  P F    Y + +      +L  G+ I ++EA D D G  V+  +R P  K F
Sbjct: 812 LDIDDNSPVFTNSTYTVLVEE----NLPAGTTILQIEAKDVDLGANVSYRIRSPEVKHF 866


>gi|410304872|gb|JAA31036.1| FAT tumor suppressor homolog 1 [Pan troglodytes]
          Length = 4588

 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 63/213 (29%), Positives = 104/213 (48%), Gaps = 18/213 (8%)

Query: 33   VSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTV-TTNKPRDL--RVKYWLSNDYG-ER 88
            V+  G +L    F +NEY V   EN P++ +++ V TT+    +   V Y + ND+  +R
Sbjct: 2480 VTVIGGNLHSPAFLQNEYEVELAENAPLHTLVMEVKTTDGDSGIYGHVTYHIVNDFAKDR 2539

Query: 89   FSISRQGDISLMQCLDYET--EDSYRFTVYATDTLMTTS-ATVNISVVNVNDWDPRFRYP 145
            F I+ +G I  ++ LD ET  E      + A D     +  TVN+ + + ND  P+FR  
Sbjct: 2540 FYINERGQIFTLEKLDRETPAEKVISVRLMAKDAGGKVAFCTVNVILTDDNDNAPQFRAT 2599

Query: 146  QYELFLPHIPLADLTPGSVIGKVEAADGDKGDR--VTLSLRGPYEKM---FSIND-SGHI 199
            +YE+ +     +    G+ + KV A+D D+G    +T ++    E +     IN  SG I
Sbjct: 2600 KYEVNIG----SSAAKGTSVIKVLASDADEGSNADITYAIEADSESVKENLEINKLSGVI 2655

Query: 200  SIVD-LSALNTSTIQLVVVATDTGNPPRQASVP 231
            +  + L  L        V A D G+P +++ VP
Sbjct: 2656 TTKESLIGLENEFFTFFVRAVDNGSPSKESVVP 2688



 Score = 61.2 bits (147), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 41/156 (26%), Positives = 77/156 (49%), Gaps = 11/156 (7%)

Query: 33   VSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWL---SNDYGERF 89
            +SK   S   + F ++ ++ + +E+ PV +++  ++   P    +  W      +Y   F
Sbjct: 1346 ISKPKPSPEPISFEESFFTFTVMESDPVAHMIGVISVEPPG---IPLWFDITGGNYDSHF 1402

Query: 90   SISR-QGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYE 148
             + R  G I + + LD E + +Y  TV ATD   T    V I V++ ND  P+F   +YE
Sbjct: 1403 DVDRGTGTIIVAKPLDAEQKSNYNLTVEATDGTTTILTQVFIKVIDTNDHRPQFSTSKYE 1462

Query: 149  LFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR 184
            + +P     D  P + I ++ A D D+ +++  +L+
Sbjct: 1463 VVIPE----DTAPETEILQISAVDQDEKNKLIYTLQ 1494



 Score = 58.2 bits (139), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 59/244 (24%), Positives = 106/244 (43%), Gaps = 40/244 (16%)

Query: 4    EDDFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYV 63
            E++F    T  VRA+   +  + ++  + V      ++  +FS+  Y+ +  E++P+   
Sbjct: 2665 ENEFF---TFFVRAVDNGSPSKESVVPVYVKILPPEMQLPKFSEPFYTFTVSEDVPIGTE 2721

Query: 64   LLTVTTNKPRDLRVKYWLSN----DYGERFSISRQ-GDISLMQCLDYETEDSYRFTVYAT 118
            +  +       +       N    +  E F I RQ G + L + LD+ET   Y+F++ A 
Sbjct: 2722 IDLIRAEHSGTVLYSLVKGNTPESNRDESFVIDRQSGRLKLEKSLDHETTKWYQFSILAR 2781

Query: 119  ----DTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGD 174
                D  M  S  V+I V + ND  P F    YE F+    + +L  GS + ++ A+D D
Sbjct: 2782 CTQDDHEMVASVDVSIQVKDANDNSPVFESSPYEAFI----VENLPGGSRVIQIRASDAD 2837

Query: 175  KGDRVTLSLRGPYEKMFSINDSGHISIVDLSALNTST----------------IQLVVVA 218
             G    +        M+S++ S  + +++  A+N  T                 Q+ VVA
Sbjct: 2838 SGTNGQV--------MYSLDQSQSVEVIESFAINMETGWITTLKELDHEKRDNYQIKVVA 2889

Query: 219  TDTG 222
            +D G
Sbjct: 2890 SDHG 2893



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 57/196 (29%), Positives = 94/196 (47%), Gaps = 23/196 (11%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSN-DYGERFSIS-RQGDISLMQC 102
            F K  YS    EN+ V+  ++ V  N P  L+V Y +++ D   +F+I+   G I+++  
Sbjct: 2182 FEKPFYSAEIAENIQVHSPVVHVQANSPEGLKVFYSITDGDPFSQFTINFNTGVINVIAP 2241

Query: 103  LDYETEDSYRFTVYATDTLMTTSATVNISVV--NVNDWDPRFRYPQYELFLPHIPLADLT 160
            LD+E   +Y+ ++ ATD+L    A V + ++  ++ND  P F    Y         A L+
Sbjct: 2242 LDFEAHPAYKLSIRATDSLTGAHAEVFVDIIVEDINDNPPVFAQQSY--------AATLS 2293

Query: 161  PGSVIG----KVEAADGDK--GDRVTLSLRGPYEK---MFSINDS-GHISIVD-LSALNT 209
              SVIG    +V A D D      ++  + G + K    F ++ S G IS++  L    +
Sbjct: 2294 EASVIGTSVVQVRATDSDSEPNRGISYQMFGNHSKSHDHFHVDSSTGLISLLRTLDYEQS 2353

Query: 210  STIQLVVVATDTGNPP 225
                + V A D G PP
Sbjct: 2354 RQHTIFVRAVDGGMPP 2369



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 61/225 (27%), Positives = 108/225 (48%), Gaps = 19/225 (8%)

Query: 13   LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVT---T 69
            L+VRA   D   R+  A+++++    +    +FS + Y+++  EN     +L  V     
Sbjct: 3095 LLVRAT--DGGGRFCQASVVLTLEDVNDNAPEFSADPYAITVFENTEPGTLLTRVQATDA 3152

Query: 70   NKPRDLRVKYWLSNDYGERFSISR-QGDISLMQCLDYETEDSYRFTVYATDT----LMTT 124
            +   + ++ Y L +    +FSI+   G I L + LD E +  Y  ++ A D      +T 
Sbjct: 3153 DAGLNRKILYSLIDSADGQFSINELSGIIQLEKPLDRELQAVYTLSLKAVDQGLPRRLTA 3212

Query: 125  SATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAA--DGDKGDRVTLS 182
            + TV +SV+++ND  P F Y +Y   +      D+  G+ + +V AA  D +    +T S
Sbjct: 3213 TGTVVVSVLDINDNPPVFEYREYGATVSE----DILVGTEVLQVYAASRDIEANAEITYS 3268

Query: 183  -LRGPYEKMFSIND-SGHISIVD-LSALNTSTIQLVVVATDTGNP 224
             + G     FSI+  +G + I++ L   ++    L V ATD G P
Sbjct: 3269 IISGNEHGKFSIDSKTGAVFIIENLDYESSHEYYLTVEATDGGTP 3313



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 44/145 (30%), Positives = 67/145 (46%), Gaps = 8/145 (5%)

Query: 90   SISRQGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYEL 149
            +I  +  + + + LD E  D+Y  T+ ATD   ++ A V + V++ ND  P      Y  
Sbjct: 2971 NIQNEWKVYVKKPLDREKRDNYLLTITATDGTFSSKAIVEVKVLDANDNSPVCEKTLYSD 3030

Query: 150  FLPHIPLADLTPGSVIGKVEAADGD--KGDRVTLSLRGPYEKMFSIN-DSGHISI-VDLS 205
              P     D+ PG +I +V A D D      +T +L G   + F +N D+G +     L 
Sbjct: 3031 TTPE----DVLPGKLILQVSATDADIRSNAEITYTLLGSGAEKFKLNPDTGELKTSTPLD 3086

Query: 206  ALNTSTIQLVVVATDTGNPPRQASV 230
                +   L+V ATD G    QASV
Sbjct: 3087 REEQAVYHLLVRATDGGGRFCQASV 3111



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 60/215 (27%), Positives = 101/215 (46%), Gaps = 21/215 (9%)

Query: 27   ALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLS---- 82
            A  T++VS    +     F   EY  +  E++ V   +L V     RD+     ++    
Sbjct: 3212 ATGTVVVSVLDINDNPPVFEYREYGATVSEDILVGTEVLQVYAAS-RDIEANAEITYSII 3270

Query: 83   --NDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVN 136
              N++G +FSI S+ G + +++ LDYE+   Y  TV ATD     ++  ATVN++V ++N
Sbjct: 3271 SGNEHG-KFSIDSKTGAVFIIENLDYESSHEYYLTVEATDGGTPSLSDVATVNVNVTDIN 3329

Query: 137  DWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS-LRGPYEKMFSIND 195
            D  P F    Y   +    + + +  +V+   + ADG     +  S + G     F+I+ 
Sbjct: 3330 DNTPVFSQDTYTTVISEDAVLEQSVITVMA--DDADGPSNSHIHYSIIDGNQGSSFTIDP 3387

Query: 196  -SGHISIVDLSALNTSTIQ---LVVVATDTGNPPR 226
              G + +  L  L+   I    L V A+D G+PPR
Sbjct: 3388 VRGEVKVTKL--LDREMISGYTLTVQASDNGSPPR 3420



 Score = 43.1 bits (100), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 55/215 (25%), Positives = 91/215 (42%), Gaps = 19/215 (8%)

Query: 24  DRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLR---VKYW 80
           DR A   ++V   G +    +F++  Y  +  EN+P+   +++++   P +     V Y 
Sbjct: 442 DRKASTKVLVKVLGANSNPPEFTQTAYKAAFDENVPIGTTVMSLSAVDPDEGENGYVTYS 501

Query: 81  LSNDYGERFSISR-QGDISLMQCLDYE-TEDSYRFTVYATDTLMTTSATVN----ISVVN 134
           ++N     F+I    G +S  + LDYE     Y   + A+D  +     V     I++ N
Sbjct: 502 IANLNHVPFAIDHFTGAVSTSENLDYELMPRVYTLRIRASDWGLPYRREVEVLATITLNN 561

Query: 135 VNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYE-KMFSI 193
           +ND  P F     E  +P     DL  G  I  V A D D+   V   +    E  +FS+
Sbjct: 562 LNDNTPLFEKINCEGTIPR----DLGVGEQITTVSAIDADELQLVQYQIEAGNELDLFSL 617

Query: 194 NDSGHI-----SIVDLSALNTSTIQLVVVATDTGN 223
           N +  +     S++D      S   L + ATD  N
Sbjct: 618 NPNSGVLSLKQSLMDGLGAKVSFHSLRITATDGEN 652



 Score = 41.2 bits (95), Expect = 0.93,   Method: Compositional matrix adjust.
 Identities = 54/191 (28%), Positives = 85/191 (44%), Gaps = 30/191 (15%)

Query: 56   ENLPVNYVLLTVTTNKP---RDLRVKYWLSNDYG-ERFSISRQ-GDISLMQCLDYETEDS 110
            E+ PV  +++TV+ +     RD  ++Y + +  G   F I  + G I     LD E+   
Sbjct: 1045 EDAPVGSLVMTVSAHDEDAGRDGEIRYSIRDGSGVGVFKIGEETGVIETSDRLDRESTSH 1104

Query: 111  YRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSV-IG 166
            Y  TV+ATD     +++   + I V +VND  P+   P   ++ P I   + +P  V + 
Sbjct: 1105 YWLTVFATDQGVVPLSSFIEIYIEVEDVNDNAPQTSEP---VYYPEI--MENSPKDVSVV 1159

Query: 167  KVEAADGDKGDRVTLSLRGPYEKMFSINDSGHISIVDLSALNTSTIQ-----------LV 215
            ++EA D D      L       K+ S N  G  SI   + L T+T +           L 
Sbjct: 1160 QIEAFDPDSSSNDKLMY-----KITSGNPQGFFSIHPKTGLITTTSRKLDREQQDEHILE 1214

Query: 216  VVATDTGNPPR 226
            V  TD G PP+
Sbjct: 1215 VTVTDNGIPPK 1225



 Score = 40.8 bits (94), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 56/195 (28%), Positives = 85/195 (43%), Gaps = 20/195 (10%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTTNKPRDL----RVKYWLSNDYGERFSI-SRQGDIS 98
            +F +  Y V   E+  V+  ++ V     +DL     V Y +  D  + FSI S  G + 
Sbjct: 821  EFLQESYFVEVSEDKEVHSEIIQVEATD-KDLGPNGHVTYSILTD-TDTFSIDSVTGVVR 878

Query: 99   LMQCLDYETEDSYRFTVYATDTL-----MTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
            + + LD E +  +   + A D       + ++  V +S+ +VND  P F  P Y + +  
Sbjct: 879  IARPLDRELQHEHYLKIEARDQAREEPQLFSTVVVKVSLEDVNDNPPTFIPPNYRVKV-- 936

Query: 154  IPLADLTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSIND-SGHISIVD-LSALNT 209
                DL  G+VI  +EA D D G   +V  SL    E  F ++  SG + IV  L     
Sbjct: 937  --REDLPEGTVIMWLEAHDPDLGQSGQVRYSLLDHGEGNFDVDKLSGAVRIVQPLDFEKK 994

Query: 210  STIQLVVVATDTGNP 224
                L V A D G P
Sbjct: 995  QVYNLTVRAKDKGKP 1009



 Score = 38.1 bits (87), Expect = 8.2,   Method: Compositional matrix adjust.
 Identities = 42/162 (25%), Positives = 72/162 (44%), Gaps = 14/162 (8%)

Query: 45   FSKNEYSVSALENLPVNY-VLLTVTTNKPRDLRVKYWL-----SNDYGERFSISRQGDIS 98
            FS+  YSV   EN PV + VL  V T++        +       ND  + F ++ QG + 
Sbjct: 3440 FSRGNYSVIIQENKPVGFSVLQLVVTDEDSSHNGPPFFFTIVTGNDE-KAFEVNPQGVLL 3498

Query: 99   LMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIP 155
                +  + +D Y   V   D     +++   ++I V+  + + P       E+F+    
Sbjct: 3499 TSSAIKRKEKDHYLLQVKVADNGKPQLSSLTYIDIRVIEESIYPPAIL--PLEIFI--TT 3554

Query: 156  LADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSG 197
              +   G VIGK+ A D D  D +T SL    + +FS++ +G
Sbjct: 3555 SGEEYSGGVIGKIHATDQDVYDTLTYSLDPQMDNLFSVSSTG 3596


>gi|119514226|gb|ABL75889.1| protocadherin 2G14 [Takifugu rubripes]
          Length = 940

 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 60/200 (30%), Positives = 98/200 (49%), Gaps = 21/200 (10%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPR-----DLRVKYW-LSNDYGERFSISRQ-GDI 97
           FS+  Y  S  EN PV+ V++ V+          D+  ++  +S D    FSI ++ G I
Sbjct: 236 FSQAVYKASLPENSPVDTVVMQVSATDADEGVNGDVTYEFGHVSEDVKNVFSIDKKSGQI 295

Query: 98  SLMQCLDYETEDSYRFTVYATDTL-MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
            ++  +DYE+E SY   V A D L +++ A V ISV +VND  P          +P    
Sbjct: 296 KVISVIDYESESSYEIRVKAKDGLGLSSYAKVIISVTDVNDNAPIINIKSLTNPVPE--- 352

Query: 157 ADLTPGSVIGKVEAADGDKGD----RVTLSLRGPYEKMFSINDSGHISIVDLSALN---T 209
            D++PGS +G +   D D  +    R ++    P++ + SI +  + S+V    L+    
Sbjct: 353 -DVSPGSEVGIINVQDRDSENNRQVRCSIQQNVPFKLVPSIKN--YYSLVTTGQLDRELV 409

Query: 210 STIQLVVVATDTGNPPRQAS 229
           S   + + ATD G+PP  +S
Sbjct: 410 SDYNITISATDEGSPPLSSS 429



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 71/272 (26%), Positives = 116/272 (42%), Gaps = 35/272 (12%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRDLR----VKYWL--SNDYGERFS--ISRQGD 96
           F +  YS    EN      L +V+   P D R    V Y L  +   G   S  +S  GD
Sbjct: 446 FEEESYSAYVSENNRAGSTLCSVSAGDP-DWRQNGTVIYSLLAAEVNGAPVSSYVSVNGD 504

Query: 97  ISLMQC---LDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYE-- 148
             L+      DYE   S++  V A D     ++++ TV++ + +VND  P+  YP  E  
Sbjct: 505 TGLIHAVRSFDYEQLRSFKVHVMARDNGSPPLSSNVTVSVFISDVNDNSPQILYPAPEGN 564

Query: 149 LFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-DSGHISIV-D 203
            F+  +       GS++ KV A D D G    LS   ++     +FSI   SG I    D
Sbjct: 565 SFMTELVPKAAHGGSLVSKVIAVDADSGQNAWLSYHIVKSSDPGLFSIGVHSGEIRTQRD 624

Query: 204 LSALNTSTIQLVVVATDTGNPPRQASVPAIMHFPEAIVQ----------QASSKLNSGTS 253
           +S  ++    L+V   D G P   A+    +   + + +          + +SKL   TS
Sbjct: 625 ISESDSMKQNLIVAVKDNGQPSLSATCSMYLLISDNLAEVPELKDISYDEKNSKL---TS 681

Query: 254 STVLIILGVVLIVLGFVIILLILYIHKNKHTK 285
             ++ ++ V    L F+II+L +   + +  +
Sbjct: 682 YLIIALVSVSTFFLTFIIIILGVRFCRRRKPR 713


>gi|449499705|ref|XP_004186240.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 4 [Taeniopygia
            guttata]
          Length = 5033

 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 73/269 (27%), Positives = 114/269 (42%), Gaps = 42/269 (15%)

Query: 2    INEDD-----FLQPITLV---VRAIQYDNQDRYALATLIVSKAGTSLRELQ--------- 44
            I+EDD     FL P+T V    RA+ Y+ Q  Y L T+     G     ++         
Sbjct: 1926 ISEDDEEGIFFLNPVTGVFNLTRALDYEAQQYYIL-TVRAEDGGGQFTAIRVYFNILDVN 1984

Query: 45   -----FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWL-SNDYGERFSISRQG 95
                 F     S S +ENLP    +L  T     D    ++ + + S D   +F I  +G
Sbjct: 1985 DNPPVFGMASCSTSLMENLPPGSAILNFTVTDADDGPNSQLSFSIASGDSAGQFGIDNRG 2044

Query: 96   DISLMQCLDYETEDSYRFTVYATD------TLMTTSATVNISVVNVNDWDPRFRYPQYEL 149
             +S+ + LD E++  Y   V   D      +  T++A V+I +++VND  P F  P+   
Sbjct: 2045 VLSIRKPLDRESQSFYSLVVQVHDMAPLPASRYTSTAQVSIILLDVNDSPPSFISPKLTY 2104

Query: 150  FLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIND-SGHISIV-DLS 205
               + P+      +V+ K +A D D G    +  SL  P    FSI    G + +  +L 
Sbjct: 2105 VPENTPI-----DTVVFKAQATDPDSGPNSYIEYSLLPPPGNKFSIGTIDGEVRLTGELD 2159

Query: 206  ALNTSTIQLVVVATDTGNPPRQASVPAIM 234
                +   L VVATD G P   +S   ++
Sbjct: 2160 REAVANYTLTVVATDKGQPSLSSSTDVVV 2188



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 61/193 (31%), Positives = 92/193 (47%), Gaps = 24/193 (12%)

Query: 50   YSVSALENLPVNYVLLTVTTNKPRDLRV----KYWLSNDYGERFSIS-RQGDISLMQCLD 104
            +S S  EN P+ + +  VTT+   D+ V    +Y +  D    F+I+   GDI++ + L+
Sbjct: 2825 FSASVPENAPLGFTVARVTTSD-EDIGVNAVSRYSI-RDTSLPFTINPSTGDITISRPLN 2882

Query: 105  YETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSV 164
             E  D YR  V A D+  T S  V I V +VND  PRF  P Y L  P +P   L     
Sbjct: 2883 REDTDRYRIRVSAHDSGWTVSTDVTIFVSDVNDNAPRFTKPSYYLECPELPGIGLK---- 2938

Query: 165  IGKVEAADGDKGD--RVTLSLRGPYEKMFSIN-DSGHI---------SIVDLSALNTSTI 212
            + +V A D D+G   +V   ++   E  F IN  +G I         +    S +N +  
Sbjct: 2939 VTQVSATDPDEGSNGQVFYFIKSQSE-FFRINATTGEIFNKQYLRYQNSSGSSNVNINRH 2997

Query: 213  QLVVVATDTGNPP 225
              +V ++D G+PP
Sbjct: 2998 SFIVTSSDRGSPP 3010



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 68/227 (29%), Positives = 100/227 (44%), Gaps = 41/227 (18%)

Query: 45   FSKNEYSVSALENLPV--NYVLLTVTTNKPRDLRVK--YWL--SNDYGERFSISRQGDIS 98
            F  + YSV+  ENL      +L  V  +  + L  K  Y L   N+ G  F++S  G++ 
Sbjct: 2305 FELSPYSVNVPENLETLPKVILQVVARDDDQGLNSKLTYMLVAGNEEGA-FTLSGSGELR 2363

Query: 99   LMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIP 155
            L+Q LD E ++ Y   V A DT    +T + T+ ++V +VND  P F +  Y   +P   
Sbjct: 2364 LVQSLDREAKEQYLLLVTAADTGSPALTGTGTIAVTVDDVNDNVPTFAFNMYFATVPE-- 2421

Query: 156  LADLTPGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSINDS-GHI---SIVDLSALNTS 210
              D   G+ I  V ++D D      +S R       F+IN S G I   +++D  A    
Sbjct: 2422 --DAPTGTDILLVNSSDADASTNAVISYRLMGGNSQFTINPSTGQIITSALLDREARENY 2479

Query: 211  TIQLVVVATDTG--------------------NPPRQASVPAIMHFP 237
            T  LVVVA+D G                    NPP+    P + H P
Sbjct: 2480 T--LVVVASDGGFPTALSSSTSVLVSVDDVNDNPPKFQHHPYVTHVP 2524



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 53/186 (28%), Positives = 91/186 (48%), Gaps = 10/186 (5%)

Query: 45   FSKNEYSVSALENLPVNYVLLTV-TTNKPRDLRVKYWLS-NDYGERFSISR-QGDISLMQ 101
            FS+  YS    EN+ + Y + TV  +    +  + Y ++  D    F+I+R  G I+   
Sbjct: 839  FSQGTYSFVVFENVALGYHVGTVFASTMDLNTNISYLITTGDQRGVFAINRVTGQITTAS 898

Query: 102  CLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTP 161
             +D E +  Y+  V A    +T  A VNI+V ++ND  P F     ++      + +   
Sbjct: 899  IIDREEQAFYQLKVVARGGAITGDAVVNITVKDLNDNSPHF----IQVVESVNVVENWKA 954

Query: 162  GSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIND-SGHISIVDLSALNTSTIQLVVVA 218
            G  I + +A D D+G    V  SL+   + +FSIN+ +G IS+     +N  + Q+ ++A
Sbjct: 955  GHTIFQAKALDPDEGVNGVVLYSLKQNPKGLFSINEQTGAISLTGPLDINAGSYQVEILA 1014

Query: 219  TDTGNP 224
            +D G P
Sbjct: 1015 SDMGVP 1020



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/101 (32%), Positives = 49/101 (48%), Gaps = 5/101 (4%)

Query: 77   VKYWLSNDYGERFSIS-RQGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNV 135
            V Y + +   + F I    G++   + LD E    Y   V A D L ++   +NI+V +V
Sbjct: 1821 VTYTIISGADDSFHIDPESGELIATKRLDRERRSKYSLLVRADDGLQSSDVRINITVSDV 1880

Query: 136  NDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG 176
            ND  P+F  P Y   +P     D TPGS++  + A D D G
Sbjct: 1881 NDHIPKFSKPVYSFDIPE----DATPGSLVAAILATDDDSG 1917



 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 58/192 (30%), Positives = 93/192 (48%), Gaps = 15/192 (7%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWL-SNDYGERFSI-SRQGDISL 99
            F++  Y V   EN      L+ V     ++  + +V+Y + S D    F I S  G I++
Sbjct: 2200 FAQKLYKVEVAENTLTGTDLIQVLAADGDEGTNGQVRYAIVSGDANSEFRIDSVTGVITV 2259

Query: 100  MQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
             + LD E + SY  TV ++D   +  T + TV+I + +VND+ P F    Y +   ++P 
Sbjct: 2260 AKPLDREKKPSYTLTVQSSDRGSSPRTDTTTVSIVLKDVNDFIPTFELSPYSV---NVPE 2316

Query: 157  ADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSINDSGHISIVD-LSALNTSTI 212
               T   VI +V A D D+G    L+   + G  E  F+++ SG + +V  L        
Sbjct: 2317 NLETLPKVILQVVARDDDQGLNSKLTYMLVAGNEEGAFTLSGSGELRLVQSLDREAKEQY 2376

Query: 213  QLVVVATDTGNP 224
             L+V A DTG+P
Sbjct: 2377 LLLVTAADTGSP 2388



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 42/139 (30%), Positives = 64/139 (46%), Gaps = 11/139 (7%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGERFSIS-RQGDISLM 100
            FS  EY  + LEN P    ++ +     +   +  + Y + +   + F I    G I+  
Sbjct: 3242 FSPEEYFPTVLENAPSGTTVICLNATDADSGSNAVIAYAIQSSDSDLFVIDPNTGTITTQ 3301

Query: 101  QCLDYETEDSYRFTVYA---TDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLA 157
              LDYET+ SY  TV A    D    + ATVNI +   N++ PRF    Y   +      
Sbjct: 3302 GFLDYETKQSYHLTVKAFNVPDEERCSFATVNIQLEGTNEYVPRFVSKLYYFEVSEA--- 3358

Query: 158  DLTPGSVIGKVEAADGDKG 176
              + G+V+G+V A+D D G
Sbjct: 3359 -ASKGTVVGEVFASDRDMG 3376



 Score = 47.0 bits (110), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 51/183 (27%), Positives = 86/183 (46%), Gaps = 16/183 (8%)

Query: 56   ENLPVNYVLLTVTTNKPR---DLRVKYWLSNDYGERFSISR-QGDISLMQCLDYETEDSY 111
            EN P++ V+       P    +  ++Y L    G +FSI    G++ L   LD E   +Y
Sbjct: 2107 ENTPIDTVVFKAQATDPDSGPNSYIEYSLLPPPGNKFSIGTIDGEVRLTGELDREAVANY 2166

Query: 112  RFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKV 168
              TV ATD     +++S  V + V+++ND +P F    Y++ +    L     G+ + +V
Sbjct: 2167 TLTVVATDKGQPSLSSSTDVVVIVLDINDNNPLFAQKLYKVEVAENTLT----GTDLIQV 2222

Query: 169  EAADGDKGDRVTLS---LRGPYEKMFSIND-SGHISIVD-LSALNTSTIQLVVVATDTGN 223
             AADGD+G    +    + G     F I+  +G I++   L      +  L V ++D G+
Sbjct: 2223 LAADGDEGTNGQVRYAIVSGDANSEFRIDSVTGVITVAKPLDREKKPSYTLTVQSSDRGS 2282

Query: 224  PPR 226
             PR
Sbjct: 2283 SPR 2285



 Score = 45.1 bits (105), Expect = 0.065,   Method: Compositional matrix adjust.
 Identities = 41/149 (27%), Positives = 74/149 (49%), Gaps = 12/149 (8%)

Query: 95   GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFL 151
            G ++L+  LDYE   SY   + A D+    ++++  ++I V++ ND  P F  P+  L +
Sbjct: 1311 GQVTLVGRLDYEATASYSLVIQAVDSGAVSLSSTCMLSIDVLDENDNSPSF--PKSTLLV 1368

Query: 152  PHIPLADLTPGSVIGKVEAADGDKGDRVTL--SLRGP-YEKMFSIN-DSGHISIVDLSAL 207
                L ++  G ++  V A D D GD   L  S+ G      FSI+ ++G I +      
Sbjct: 1369 DV--LENMRVGELVSSVTATDSDSGDNADLHYSITGTNNHGTFSISPNTGSIFLAKKLDF 1426

Query: 208  NTSTI-QLVVVATDTGNPPRQASVPAIMH 235
             T  + +L + A D G P + +++  ++H
Sbjct: 1427 ETQYLYKLNITAKDQGRPLQSSTMSVVIH 1455



 Score = 42.4 bits (98), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 60/226 (26%), Positives = 89/226 (39%), Gaps = 35/226 (15%)

Query: 44   QFSKNEYSVSALENL-PVNYVLLTVTTNKPRDL--RVKYWLSNDYGER--FSISRQGDIS 98
            +FSK  YS    E+  P + V   + T+    +   + Y +S D  E   F     G  +
Sbjct: 1886 KFSKPVYSFDIPEDATPGSLVAAILATDDDSGINGEITYTISEDDEEGIFFLNPVTGVFN 1945

Query: 99   LMQCLDYETEDSYRFTVYATDTL-MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLA 157
            L + LDYE +  Y  TV A D     T+  V  ++++VND  P F        L    + 
Sbjct: 1946 LTRALDYEAQQYYILTVRAEDGGGQFTAIRVYFNILDVNDNPPVFGMASCSTSL----ME 2001

Query: 158  DLTPGSVIGKVEAADGDKGDRVTLSLR---GPYEKMFSINDSGHISIV------------ 202
            +L PGS I      D D G    LS     G     F I++ G +SI             
Sbjct: 2002 NLPPGSAILNFTVTDADDGPNSQLSFSIASGDSAGQFGIDNRGVLSIRKPLDRESQSFYS 2061

Query: 203  ------DLSALN----TSTIQLVVVATDTGNPPRQASVPAIMHFPE 238
                  D++ L     TST Q+ ++  D  + P     P + + PE
Sbjct: 2062 LVVQVHDMAPLPASRYTSTAQVSIILLDVNDSPPSFISPKLTYVPE 2107



 Score = 42.4 bits (98), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 42/149 (28%), Positives = 75/149 (50%), Gaps = 16/149 (10%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLR----VKYWLS--NDYGERFSI-SRQGD 96
            +FS++  SV+  E+  V  V+ TV+  + RD      ++Y +S  N+ G  F+I +  G 
Sbjct: 3136 EFSQSRMSVTIPESYSVGTVVRTVSA-RDRDAAMNGLIRYNISSGNEAG-IFAINTTTGT 3193

Query: 97   ISLMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
            ++L + LD+E +  +   V ATD      T   +V ++V++VND  P F   +Y    P 
Sbjct: 3194 LTLAKPLDFELDQKHELVVTATDGGWVSRTGYCSVTVNVIDVNDNSPAFSPEEY---FPT 3250

Query: 154  IPLADLTPGSVIGKVEAADGDKGDRVTLS 182
            + L +   G+ +  + A D D G    ++
Sbjct: 3251 V-LENAPSGTTVICLNATDADSGSNAVIA 3278



 Score = 41.6 bits (96), Expect = 0.57,   Method: Compositional matrix adjust.
 Identities = 52/202 (25%), Positives = 87/202 (43%), Gaps = 15/202 (7%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGERFSIS-RQGDISLM 100
            F+ N Y  +  E+ P    +L V +   +   +  + Y L      +F+I+   G I   
Sbjct: 2410 FAFNMYFATVPEDAPTGTDILLVNSSDADASTNAVISYRLMGG-NSQFTINPSTGQIITS 2468

Query: 101  QCLDYETEDSYRFTVYATDTLMTTSATVNISVV----NVNDWDPRFRYPQYELFLPHIPL 156
              LD E  ++Y   V A+D    T+ + + SV+    +VND  P+F   Q+  ++ H+P 
Sbjct: 2469 ALLDREARENYTLVVVASDGGFPTALSSSTSVLVSVDDVNDNPPKF---QHHPYVTHVP- 2524

Query: 157  ADLTPGSVIGKVEAADGDKGDRVTL--SLRGPYEKMFSINDSGHISIVDLSALNTSTIQL 214
            +  T GS +  V   D D G    L  SL G   + F I+ +    +     +  S + L
Sbjct: 2525 SPTTSGSFVFAVTVTDADAGSNAELHYSLVGKNSEKFHIDPARGAILAAKPLVGESEVTL 2584

Query: 215  VVVATDTGNPPRQASVPAIMHF 236
             V   D+G  P+  S    + F
Sbjct: 2585 SVHVRDSGRYPKTDSTTVTVRF 2606



 Score = 40.8 bits (94), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 54/191 (28%), Positives = 84/191 (43%), Gaps = 36/191 (18%)

Query: 11   ITLVVRAIQYDNQDRYALATLIVSKAGTSLREL---------------QFSKNEYSVSAL 55
            +TLV R + Y+    Y+L    V     SL                   F K+   V  L
Sbjct: 1313 VTLVGR-LDYEATASYSLVIQAVDSGAVSLSSTCMLSIDVLDENDNSPSFPKSTLLVDVL 1371

Query: 56   ENLPVNYVLLTVT-----TNKPRDLRVKYWLSNDYGERFSIS-RQGDISLMQCLDYETED 109
            EN+ V  ++ +VT     +    DL      +N++G  FSIS   G I L + LD+ET+ 
Sbjct: 1372 ENMRVGELVSSVTATDSDSGDNADLHYSITGTNNHGT-FSISPNTGSIFLAKKLDFETQY 1430

Query: 110  SYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELF---LPHIPLADLTPGS 163
             Y+  + A D    L +++ +V I V + ND  P F  P  ++F   + ++P+     GS
Sbjct: 1431 LYKLNITAKDQGRPLQSSTMSVVIHVRDFNDNPPHF--PPGDIFKSIVENVPV-----GS 1483

Query: 164  VIGKVEAADGD 174
             +  V A D D
Sbjct: 1484 SVISVTAHDPD 1494



 Score = 40.0 bits (92), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 47/145 (32%), Positives = 70/145 (48%), Gaps = 27/145 (18%)

Query: 103 LDYETEDSYRFTVYATDTLMT---TSATVNISVVNVNDWDPRFRYPQ-YELFLPHIPLAD 158
           LD ET       V A D  +    + A + +++++VND  PRF  P+ Y+     + LA+
Sbjct: 575 LDRETASQVVLNVSARDQGVQPKFSYAQLVVTILDVNDNKPRFGQPEGYQ-----VSLAE 629

Query: 159 LTP-GSVIGKVEAADGDKGDR--VTLSLR---------GPY----EKMFSIND-SGHIS- 200
            +P G+ +  + A DGD GD   V  SL+         GP      +MF ++  SG +S 
Sbjct: 630 NSPSGTELLVLSATDGDLGDNGTVRFSLQEAEPALVAVGPSPVTPRQMFRLDPVSGKLST 689

Query: 201 IVDLSALNTSTIQLVVVATDTGNPP 225
           I  L     S   L V+ATD G+PP
Sbjct: 690 ISQLDREEQSHFSLQVLATDLGSPP 714



 Score = 39.7 bits (91), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 50/187 (26%), Positives = 82/187 (43%), Gaps = 27/187 (14%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGER---------FSIS 92
           FS+  Y     E+ PV   +L VT    ++  +  ++Y L    G           F + 
Sbjct: 246 FSQTLYQARVPEDAPVGASVLQVTAADADEGTNADIRYRLEGGDGSGAGDGAGSLPFEVD 305

Query: 93  -RQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPR--FRY-P 145
              G I + + LDYE    Y  TV ATD     ++  A   I +++VND +PR  FRY P
Sbjct: 306 PESGVIRIRERLDYEVRQQYSLTVQATDRGVPALSGRAEALIRLLDVNDNEPRVKFRYFP 365

Query: 146 QYELFLPHIPLADLTPGSVIGKVEAADGDK----GDRVTLSLRGPYEKMFSINDSG--HI 199
               F      A   PG+V+  +  +D D     G+     L G  ++ F ++ S   ++
Sbjct: 366 ATSRFASVDENA--APGTVVALLTVSDADSPAANGNISVSILAGNEQRHFEVHSSKVPNL 423

Query: 200 SIVDLSA 206
           S++ ++A
Sbjct: 424 SLIKVAA 430



 Score = 39.3 bits (90), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 38/140 (27%), Positives = 66/140 (47%), Gaps = 12/140 (8%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTTNKPRDL--RVKYWLSNDYGER-FSISRQ-GDISL 99
            +F ++ +     ENL    +L     ++   L  ++ Y +     E  FSI+R  G+I  
Sbjct: 2716 EFERDPFIAEIAENLSPRKILTVAAVDRDSGLNGQLNYEIIEGNTENSFSINRATGEIRS 2775

Query: 100  MQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
            ++ LD E    Y  T+ A+D    L +T+  V I+V++ ND  PRF     ++F   +P 
Sbjct: 2776 IRPLDREKLSQYTLTIKASDKGIPLQSTTVKVIINVLDENDNAPRFS----QIFSASVP- 2830

Query: 157  ADLTPGSVIGKVEAADGDKG 176
             +   G  + +V  +D D G
Sbjct: 2831 ENAPLGFTVARVTTSDEDIG 2850



 Score = 39.3 bits (90), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 36/135 (26%), Positives = 62/135 (45%), Gaps = 8/135 (5%)

Query: 89   FSISRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYP 145
            FS+S  G ++  + +D E    +  +V   D+    M+++ TV I V++ ND   + R  
Sbjct: 3606 FSLSTAGVLTTTREIDREQISDFYLSVITRDSGVPQMSSTGTVQIKVIDQNDNPSQPR-- 3663

Query: 146  QYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSGHISIVDLS 205
              E+F+ +    +L PG ++G V+  D D  D    SL      +FSI   G   +   +
Sbjct: 3664 TVEIFVHY--YGNLFPGGILGNVKPQDPDVLDSFQCSLTSGVTSLFSI-PGGTCELHSQA 3720

Query: 206  ALNTSTIQLVVVATD 220
                 T  L V++ D
Sbjct: 3721 RSTDGTFDLAVLSND 3735



 Score = 38.5 bits (88), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 62/239 (25%), Positives = 104/239 (43%), Gaps = 31/239 (12%)

Query: 11  ITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNE-YSVSALENLPVNYVLLTVTT 69
           + L V A     Q +++ A L+V+    +  + +F + E Y VS  EN P    LL ++ 
Sbjct: 583 VVLNVSARDQGVQPKFSYAQLVVTILDVNDNKPRFGQPEGYQVSLAENSPSGTELLVLSA 642

Query: 70  NKPRDL----RVKYWLSNDYGERFSIS------RQ--------GDISLMQCLDYETEDSY 111
               DL     V++ L        ++       RQ        G +S +  LD E +  +
Sbjct: 643 TD-GDLGDNGTVRFSLQEAEPALVAVGPSPVTPRQMFRLDPVSGKLSTISQLDREEQSHF 701

Query: 112 RFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKV 168
              V ATD     +++ A VN+++++VND  P F   QY     HI   +   G+ +  +
Sbjct: 702 SLQVLATDLGSPPLSSVARVNVTILDVNDNSPVFYPVQY---FAHI-QENEPAGTYVTTL 757

Query: 169 EAADGDKGDRVTL--SLRGPYEKMFSIN-DSGHISI-VDLSALNTSTIQLVVVATDTGN 223
            A D D G   T+  S+       F ++  +G I+  + L     +  QL +VATD G+
Sbjct: 758 SATDPDLGPNGTVKYSISAGDTSRFQVHGQTGVITTKIALDREEKTAYQLQIVATDGGH 816


>gi|405957380|gb|EKC23595.1| Protocadherin-9 [Crassostrea gigas]
          Length = 1154

 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 65/227 (28%), Positives = 106/227 (46%), Gaps = 12/227 (5%)

Query: 11  ITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLP-VNYVLLTVTT 69
           ITL V A+   +  R    ++I+     +  + +F    +  +  EN P  + V L V T
Sbjct: 636 ITLGVLAVDGGSPARTGTTSVIIKITDINDNKPEFQNQSFEFAIQENAPKYSSVGLLVAT 695

Query: 70  NKPRDLRVKYWLSNDY--GERFSISRQGDISLMQCLDYETEDSYRFTVYATDT---LMTT 124
           +K  + ++ + L   Y  G  F I   G I   + LD ET  +Y+F+V ATD+      +
Sbjct: 696 DKDENEKITFSLLPQYNGGIPFEILPNGTIRTTEVLDRETIANYQFSVVATDSGSPPQQS 755

Query: 125 SATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLS 182
           S  ++I V+++ND  P F +P        I    L P +VI  ++  D D+G    VT  
Sbjct: 756 SVKISIDVLDMNDNAPIFMFPSDNNSTVIISYQTL-PHTVIAHLDTRDIDQGLNSTVTYV 814

Query: 183 LRGP-YEKMFSIND-SGHISIV-DLSALNTSTIQLVVVATDTGNPPR 226
            R   Y  +F +N  SG + ++  L+       +L ++A D G PPR
Sbjct: 815 TRDRNYSHIFQLNSLSGRLILMKQLTTAEIGKYKLSIIAQDKGTPPR 861



 Score = 51.6 bits (122), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 55/197 (27%), Positives = 88/197 (44%), Gaps = 17/197 (8%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKP---RDLRVKYWLSNDYGERFSISRQGDISLMQ 101
           F+K  Y V   E+  +   L+ V+ +     ++  + Y L +         R G IS   
Sbjct: 567 FTKPSYVVQTQEDNNIGASLIRVSASDKDIGKNAEITYRLQSSKYNFLIDPRSGLISAQF 626

Query: 102 CLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLAD 158
            LD E        V A D      T + +V I + ++ND  P F+   +E  +      +
Sbjct: 627 RLDREETPLITLGVLAVDGGSPARTGTTSVIIKITDINDNKPEFQNQSFEFAIQE----N 682

Query: 159 LTPGSVIGKVEAADGDKGDRVTLSLRGPYEKM--FSINDSGHISIVDLSALNTSTI---Q 213
               S +G + A D D+ +++T SL   Y     F I  +G I   ++  L+  TI   Q
Sbjct: 683 APKYSSVGLLVATDKDENEKITFSLLPQYNGGIPFEILPNGTIRTTEV--LDRETIANYQ 740

Query: 214 LVVVATDTGNPPRQASV 230
             VVATD+G+PP+Q+SV
Sbjct: 741 FSVVATDSGSPPQQSSV 757



 Score = 37.7 bits (86), Expect = 9.2,   Method: Compositional matrix adjust.
 Identities = 48/201 (23%), Positives = 87/201 (43%), Gaps = 17/201 (8%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGERF-----SISRQGD 96
           FS+  Y+++  E++ VN  +LT+T    ++  +  V Y LS    E+       +   G 
Sbjct: 351 FSQTHYNLTVDEDVAVNTTILTLTARDEDEGLNGDVIYSLSPRQDEKILKLFQVVPTSGS 410

Query: 97  ISLMQCLDYETEDSYRFTVYATDTL---MTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
           + + + L +E    YR  V A+D     + +   V ++V + ++  PR +          
Sbjct: 411 LQVKESLIFEPGKQYRIIVEASDRAKQPLMSQTQVTVNVRDTHNNPPRIKVDLLSNTDKA 470

Query: 154 IPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDSGHISIVDLSALN--- 208
             L   +P + I  V   D D G   ++  S++    ++   N   +  +V   AL+   
Sbjct: 471 QILESASPNAPIAHVTVDDPDTGYNGKINCSIQSEKFQLQKFNVLEY-KVVVAQALDREV 529

Query: 209 TSTIQLVVVATDTGNPPRQAS 229
            S  ++ VV  D GNPP  AS
Sbjct: 530 QSEYRVTVVCQDEGNPPLNAS 550


>gi|348518842|ref|XP_003446940.1| PREDICTED: protocadherin Fat 3-like [Oreochromis niloticus]
          Length = 4724

 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 73/234 (31%), Positives = 109/234 (46%), Gaps = 29/234 (12%)

Query: 29   ATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTV-TTNKPRDL--RVKYWLSNDY 85
            A +IV   G +L    FS+  Y     EN P    ++ V  T++   L  ++ Y   ND 
Sbjct: 2466 AQVIVRVLGANLYSPVFSQRFYLAEVQENAPEGSKVIQVRATDEDSGLYGQITYSFINDL 2525

Query: 86   GE-RFSISRQGDISLMQCLDYET--EDSYRFTVYATDTLMTTS-ATVNISVVNVNDWDPR 141
            G+ +F+I   G IS +Q LD E         TV A D     S  TV + + + ND  PR
Sbjct: 2526 GKTQFTIDADGVISTVQKLDRENPFNRDMVLTVMALDGGGRASFCTVRVVLADENDNAPR 2585

Query: 142  FRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSI------ 193
            FR  +Y + +     A++  GS++ +++A D D G   R+T SL    E   S+      
Sbjct: 2586 FRAVEYRMSIK----ANVAKGSLVTQIQATDPDAGSNGRITYSLYS--EARLSLVDVLEV 2639

Query: 194  -NDSGHI---SIVDLSALNTSTIQLVVVATDTGNPPRQASVPAIMHF--PEAIV 241
              DSG +   S VD   L  + +   V ATD G+P + + V A +H   P+A V
Sbjct: 2640 EPDSGWMMTKSTVD--HLQGTVLSFFVKATDGGSPAKHSLVSAFIHVVPPDAFV 2691



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 75/265 (28%), Positives = 118/265 (44%), Gaps = 42/265 (15%)

Query: 8    LQPITLVVRAIQYD-NQDRY--------------ALATLIVSKAGTSLRELQFSKNEYSV 52
            ++P T VV  I  + N+DRY               L T++V +A  S   + F+   YS 
Sbjct: 1918 VEPYTGVVTVINQNLNKDRYRFNVKVWDGRFSSMTLVTVLVREAIDS--GILFTFPVYSA 1975

Query: 53   SALENLPVNYVLLTVTTNKPRDLR--VKYWLSNDYGERFSISRQGDISLMQC--LDYETE 108
            S  EN+P N  L+TV +     L   +KY L N  G RFSI              D E +
Sbjct: 1976 SIPENIP-NITLVTVVSTVGHRLNEPLKYTLLNPVG-RFSIRPTCGAVFTTGVPFDREEK 2033

Query: 109  DSYRFTVYAT---DTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLA--DLTPGS 163
            DSY   V  +   + L      V + V +VND  P+F      + LP+  +   +  PGS
Sbjct: 2034 DSYELVVEVSREDEILRVARVIVQVQVEDVNDNSPQF------VNLPYYAVVQVEAQPGS 2087

Query: 164  VIGKVEAADGD--KGDRVTLSLRGPYEKMFSINDSGHISIVDL--SALNTSTIQLVVVAT 219
             + +V A D D  +  +VT  L+  +        +G +++     + L+ +  +L++VAT
Sbjct: 2088 SVFRVSATDKDYSRNGQVTYGLKEQHRNFQVHPVTGELTLKRAFEADLSNAEYKLILVAT 2147

Query: 220  DTGNPPRQASVPAIMHFPEAIVQQA 244
            D G PP  + V      P ++V +A
Sbjct: 2148 DGGFPPLSSEV----ELPVSVVNKA 2168



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 65/257 (25%), Positives = 106/257 (41%), Gaps = 9/257 (3%)

Query: 12   TLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNK 71
            TL VR          A A++ +S   +   + +FS+ EY    +EN      ++TV+   
Sbjct: 1614 TLSVRVTDSGFPPLMATASVRISLILSDFSKPKFSQKEYQAEIMENSKTGTYVITVSALS 1673

Query: 72   PRDLRVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDTL-MTTSATVNI 130
               +       N+    F     G I+  + LD+E   SY   V A     +  S +V I
Sbjct: 1674 RSAIIYDITRGNEERCFFINHHTGVITTRKPLDFEQTTSYFLVVRALSMAGVEASTSVII 1733

Query: 131  SVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGK---VEAADGDKGDRVTLSLR--G 185
             VV+VND  P F+  +Y   +      +    +  G    ++A D D+     L  +  G
Sbjct: 1734 QVVDVNDSPPVFQQIRYVGVVSEAAPINSVVLAEDGNPLVIQATDKDRNHNALLVFQIIG 1793

Query: 186  PYEKMFSINDSGHISIVDLSALNTSTIQLVVV---ATDTGNPPRQASVPAIMHFPEAIVQ 242
               +MF   DSG  SI  +++L+  T    V      D+G PPR A  PA +      + 
Sbjct: 1794 ETARMFFSVDSGTGSIRTIASLDYETFSEFVFRVHVRDSGQPPRDADSPAEVLIKVININ 1853

Query: 243  QASSKLNSGTSSTVLII 259
             +  K +  T  T+L++
Sbjct: 1854 DSPPKFSQDTYETILLL 1870



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 61/193 (31%), Positives = 92/193 (47%), Gaps = 19/193 (9%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSN-DYGERFSIS-RQGDISLMQC 102
            F K  Y V+  E++ V+  +L +  + P    V + +++ D   +F I    G I ++  
Sbjct: 2172 FDKPFYGVTVKEDVDVSTSVLCINASSPEGQSVIFTITDGDPSLQFDIGFDTGIIRVIYP 2231

Query: 103  LDYETEDSYRFTVYATDTLMTTSATVNISVV--NVNDWDPRFRYPQYELFLPHIPLADLT 160
            LDYET   YR TV ATDTL    + V++ +V  +VND  P F+   Y   L    +    
Sbjct: 2232 LDYETTQYYRLTVKATDTLTGAKSEVDVDIVMLDVNDNPPLFQNTSYSAVLSENSMI--- 2288

Query: 161  PGSVIGKVEAADGDKGDRVTLS---LRGPYEKM--FSIN-DSGHISIVDLSALNTSTIQ- 213
             G+ + +V A D D      +S   L   Y     FSI+ +SG I    L  L+   IQ 
Sbjct: 2289 -GTPVLQVFAQDQDTEKNAVVSYQILSDIYNSTDYFSIDSNSGLIYTARL--LDYELIQR 2345

Query: 214  --LVVVATDTGNP 224
               +V ATD+G+P
Sbjct: 2346 HNFIVRATDSGDP 2358



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 59/195 (30%), Positives = 87/195 (44%), Gaps = 18/195 (9%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWLSNDYGERFSISR-QGDISLM 100
            FS   Y  S  EN     +L  +  + P +     V Y L +     FSI    G + L 
Sbjct: 3131 FSSTHYLASVYENASPKALLTRLQASDPDEGLNRTVLYSLVDSVNGFFSIDPVTGVVVLE 3190

Query: 101  QCLDYETEDSYRFTVYATDT-----LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIP 155
            + LD E+ DSYR  V ATD       +++   + I V++VND  P F+   Y + +P   
Sbjct: 3191 KSLDRESRDSYRVRVQATDRAGQQGALSSQVDLTILVLDVNDNAPVFQRRDYAVTVPE-- 3248

Query: 156  LADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYE-KMFSINDS-GHISIV-DLSALNTS 210
              D+  G+ + +V A   D G    +T ++R   E   F+I+   G IS+  DL      
Sbjct: 3249 --DVAVGTEVVRVLATSADIGPNAEITYNIRSGNELGKFTIDRKWGSISVADDLDFEVCK 3306

Query: 211  TIQLVVVATDTGNPP 225
               L + A D GNPP
Sbjct: 3307 DYYLTIEAWDNGNPP 3321



 Score = 46.2 bits (108), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 58/201 (28%), Positives = 93/201 (46%), Gaps = 21/201 (10%)

Query: 45   FSKNEYSVSALENLPVN----YVLLTVTTNKPRDLRVKYWL--SNDYGERFSISRQ-GDI 97
            F + +Y+V+  E++ V      VL T     P +  + Y +   N+ G +F+I R+ G I
Sbjct: 3237 FQRRDYAVTVPEDVAVGTEVVRVLATSADIGP-NAEITYNIRSGNELG-KFTIDRKWGSI 3294

Query: 98   SLMQCLDYETEDSYRFTVYATDTL---MTTSATVNISVVNVNDWDPRFRYPQYELFLPHI 154
            S+   LD+E    Y  T+ A D     ++T+  V I +++VND  P F    Y L +   
Sbjct: 3295 SVADDLDFEVCKDYYLTIEAWDNGNPPLSTATMVTIELMDVNDNAPAFSQDIYNLLVSE- 3353

Query: 155  PLADLTPGSVIGKVEAADGDK--GDRVTLS-LRGPYEKMFSINDSGHISIVD--LSALNT 209
               D + G  + +V A D D     R+T S L+G     F I+    +  V+  L     
Sbjct: 3354 ---DASVGQTVTRVVAEDLDSQVNGRITYSILKGDRNNHFWIDPVAGLLKVNKKLDRELV 3410

Query: 210  STIQLVVVATDTGNPPRQASV 230
            S   L V A D+G+P   ++V
Sbjct: 3411 SRYSLSVQAFDSGSPAMSSTV 3431



 Score = 39.7 bits (91), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 57/212 (26%), Positives = 92/212 (43%), Gaps = 20/212 (9%)

Query: 26  YALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDL----RVKYWL 81
           + L T+I+    T+  + QF ++ YS    EN  +   ++T+T    RD+    ++ Y +
Sbjct: 791 WRLLTVIIED--TNDNDPQFYQDSYSALVSENSAIGMEVITITAFD-RDMGQNGQLSYIM 847

Query: 82  SNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATD-----TLMTTSATVNISVVNVN 136
                +    S  G + +   LD ET   +   +   D     T  ++  T++I + +VN
Sbjct: 848 LTSVPQFGIDSETGSVFVASQLDRETFPIFILKIEVRDMAERGTRRSSVTTLSIILEDVN 907

Query: 137 DWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGD--KGDRVTLSLRGPYEKMFSIN 194
           D  P F    Y   +    L DL PG+VI  V+A D D   G +V  SL   +   F I 
Sbjct: 908 DCSPAFIPTSYSARV----LEDLPPGTVITWVQAQDPDIGPGGQVRYSLINDFNGTFEIG 963

Query: 195 D-SGHISI-VDLSALNTSTIQLVVVATDTGNP 224
             SG + I  +L         L ++A D G P
Sbjct: 964 PISGVLRIRKELDFEKQQFFNLTLLAEDRGIP 995



 Score = 38.5 bits (88), Expect = 6.0,   Method: Compositional matrix adjust.
 Identities = 35/147 (23%), Positives = 68/147 (46%), Gaps = 9/147 (6%)

Query: 78   KYWL-SNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVV 133
            ++W+ S + G  FS+ + G +   +    E    +   + ATD+    +++S+ V + V+
Sbjct: 3484 EFWIKSGNEGNFFSLDQTGTLRCNRVFGPEAPREFTLEIQATDSGKPSLSSSSWVFLRVI 3543

Query: 134  NVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSI 193
              + + P       E+F+  + + D  PG  IG++ A D D  D ++ + +   + MF +
Sbjct: 3544 GNSQYKPTVS--PLEIFI--VMVTDTFPGGPIGRISATDRDLSDVLSFTQKPQPKSMFKV 3599

Query: 194  NDSGHISIVDLSALNTSTIQLVVVATD 220
            N     SIV L  L     Q+    +D
Sbjct: 3600 NRQDG-SIVALPGLEPGRYQMNATVSD 3625


>gi|332820729|ref|XP_003310638.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 1 [Pan troglodytes]
          Length = 4588

 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 63/213 (29%), Positives = 104/213 (48%), Gaps = 18/213 (8%)

Query: 33   VSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTV-TTNKPRDL--RVKYWLSNDYG-ER 88
            V+  G +L    F +NEY V   EN P++ +++ V TT+    +   V Y + ND+  +R
Sbjct: 2480 VTVIGGNLHSPAFLQNEYEVELAENAPLHTLVMEVKTTDGDSGIYGHVTYHIVNDFAKDR 2539

Query: 89   FSISRQGDISLMQCLDYET--EDSYRFTVYATDTLMTTS-ATVNISVVNVNDWDPRFRYP 145
            F I+ +G I  ++ LD ET  E      + A D     +  TVN+ + + ND  P+FR  
Sbjct: 2540 FYINERGQIFTLEKLDRETPAEKVISVRLMAKDAGGKVAFCTVNVILTDDNDNAPQFRAT 2599

Query: 146  QYELFLPHIPLADLTPGSVIGKVEAADGDKGDR--VTLSLRGPYEKM---FSIND-SGHI 199
            +YE+ +     +    G+ + KV A+D D+G    +T ++    E +     IN  SG I
Sbjct: 2600 KYEVNIG----SSAAKGTSVIKVLASDADEGSNADITYAIEADSESVKENLEINKLSGVI 2655

Query: 200  SIVD-LSALNTSTIQLVVVATDTGNPPRQASVP 231
            +  + L  L        V A D G+P +++ VP
Sbjct: 2656 TTKESLIGLENEFFTFFVRAVDNGSPSKESVVP 2688



 Score = 61.2 bits (147), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 41/156 (26%), Positives = 77/156 (49%), Gaps = 11/156 (7%)

Query: 33   VSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWL---SNDYGERF 89
            +SK   S   + F ++ ++ + +E+ PV +++  ++   P    +  W      +Y   F
Sbjct: 1346 ISKPKPSPEPISFEESFFTFTVMESDPVAHMIGVISVEPPG---IPLWFDITGGNYDSHF 1402

Query: 90   SISR-QGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYE 148
             + R  G I + + LD E + +Y  TV ATD   T    V I V++ ND  P+F   +YE
Sbjct: 1403 DVDRGTGTIIVAKPLDAEQKSNYNLTVEATDGTTTILTQVFIKVIDTNDHRPQFSTSKYE 1462

Query: 149  LFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR 184
            + +P     D  P + I ++ A D D+ +++  +L+
Sbjct: 1463 VVIPE----DTAPETEILQISAVDQDEKNKLIYTLQ 1494



 Score = 58.2 bits (139), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 59/244 (24%), Positives = 106/244 (43%), Gaps = 40/244 (16%)

Query: 4    EDDFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYV 63
            E++F    T  VRA+   +  + ++  + V      ++  +FS+  Y+ +  E++P+   
Sbjct: 2665 ENEFF---TFFVRAVDNGSPSKESVVPVYVKILPPEMQLPKFSEPFYTFTVSEDVPIGTE 2721

Query: 64   LLTVTTNKPRDLRVKYWLSN----DYGERFSISRQ-GDISLMQCLDYETEDSYRFTVYAT 118
            +  +       +       N    +  E F I RQ G + L + LD+ET   Y+F++ A 
Sbjct: 2722 IDLIRAEHSGTVLYSLVKGNTPESNRDESFVIDRQSGRLKLEKSLDHETTKWYQFSILAR 2781

Query: 119  ----DTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGD 174
                D  M  S  V+I V + ND  P F    YE F+    + +L  GS + ++ A+D D
Sbjct: 2782 CTQDDHEMVASVDVSIQVKDANDNSPVFESSPYEAFI----VENLPGGSRVIQIRASDAD 2837

Query: 175  KGDRVTLSLRGPYEKMFSINDSGHISIVDLSALNTST----------------IQLVVVA 218
             G    +        M+S++ S  + +++  A+N  T                 Q+ VVA
Sbjct: 2838 SGTNGQV--------MYSLDQSQSVEVIESFAINMETGWITTLKELDHEKRDNYQIKVVA 2889

Query: 219  TDTG 222
            +D G
Sbjct: 2890 SDHG 2893



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 57/196 (29%), Positives = 94/196 (47%), Gaps = 23/196 (11%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSN-DYGERFSIS-RQGDISLMQC 102
            F K  YS    EN+ V+  ++ V  N P  L+V Y +++ D   +F+I+   G I+++  
Sbjct: 2182 FEKPFYSAEIAENIQVHSPVVHVQANSPEGLKVFYSITDGDPFSQFTINFNTGVINVIAP 2241

Query: 103  LDYETEDSYRFTVYATDTLMTTSATVNISVV--NVNDWDPRFRYPQYELFLPHIPLADLT 160
            LD+E   +Y+ ++ ATD+L    A V + ++  ++ND  P F    Y         A L+
Sbjct: 2242 LDFEAHPAYKLSIRATDSLTGAHAEVFVDIIVEDINDNPPVFAQQSY--------AATLS 2293

Query: 161  PGSVIG----KVEAADGDK--GDRVTLSLRGPYEK---MFSINDS-GHISIVD-LSALNT 209
              SVIG    +V A D D      ++  + G + K    F ++ S G IS++  L    +
Sbjct: 2294 EASVIGTSVVQVRATDSDSEPNRGISYQMFGNHSKSHDHFHVDSSTGLISLLRTLDYEQS 2353

Query: 210  STIQLVVVATDTGNPP 225
                + V A D G PP
Sbjct: 2354 RQHTIFVRAVDGGMPP 2369



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 61/225 (27%), Positives = 108/225 (48%), Gaps = 19/225 (8%)

Query: 13   LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVT---T 69
            L+VRA   D   R+  A+++++    +    +FS + Y+++  EN     +L  V     
Sbjct: 3095 LLVRAT--DGGGRFCQASVVLTLEDVNDNAPEFSADPYAITVFENTEPGTLLTRVQATDA 3152

Query: 70   NKPRDLRVKYWLSNDYGERFSISR-QGDISLMQCLDYETEDSYRFTVYATDT----LMTT 124
            +   + ++ Y L +    +FSI+   G I L + LD E +  Y  ++ A D      +T 
Sbjct: 3153 DAGLNRKILYSLIDSADGQFSINELSGIIQLEKPLDRELQAVYTLSLKAVDQGLPRRLTA 3212

Query: 125  SATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAA--DGDKGDRVTLS 182
            + TV +SV+++ND  P F Y +Y   +      D+  G+ + +V AA  D +    +T S
Sbjct: 3213 TGTVVVSVLDINDNPPVFEYREYGATVSE----DILVGTEVLQVYAASRDIEANAEITYS 3268

Query: 183  -LRGPYEKMFSIND-SGHISIVD-LSALNTSTIQLVVVATDTGNP 224
             + G     FSI+  +G + I++ L   ++    L V ATD G P
Sbjct: 3269 IISGNEHGKFSIDSKTGAVFIIENLDYESSHEYYLTVEATDGGTP 3313



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 44/145 (30%), Positives = 67/145 (46%), Gaps = 8/145 (5%)

Query: 90   SISRQGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYEL 149
            +I  +  + + + LD E  D+Y  T+ ATD   ++ A V + V++ ND  P      Y  
Sbjct: 2971 NIQNEWKVYVKKPLDREKRDNYLLTITATDGTFSSKAIVEVKVLDANDNSPVCEKTLYSD 3030

Query: 150  FLPHIPLADLTPGSVIGKVEAADGD--KGDRVTLSLRGPYEKMFSIN-DSGHISI-VDLS 205
              P     D+ PG +I +V A D D      +T +L G   + F +N D+G +     L 
Sbjct: 3031 TTPE----DVLPGKLILQVSATDADIRSNAEITYTLLGSGAEKFKLNPDTGELKTSTPLD 3086

Query: 206  ALNTSTIQLVVVATDTGNPPRQASV 230
                +   L+V ATD G    QASV
Sbjct: 3087 REEQAVYHLLVRATDGGGRFCQASV 3111



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 60/215 (27%), Positives = 101/215 (46%), Gaps = 21/215 (9%)

Query: 27   ALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLS---- 82
            A  T++VS    +     F   EY  +  E++ V   +L V     RD+     ++    
Sbjct: 3212 ATGTVVVSVLDINDNPPVFEYREYGATVSEDILVGTEVLQVYAAS-RDIEANAEITYSII 3270

Query: 83   --NDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVN 136
              N++G +FSI S+ G + +++ LDYE+   Y  TV ATD     ++  ATVN++V ++N
Sbjct: 3271 SGNEHG-KFSIDSKTGAVFIIENLDYESSHEYYLTVEATDGGTPSLSDVATVNVNVTDIN 3329

Query: 137  DWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS-LRGPYEKMFSIND 195
            D  P F    Y   +    + + +  +V+   + ADG     +  S + G     F+I+ 
Sbjct: 3330 DNTPVFSQDTYTTVISEDAVLEQSVITVMA--DDADGPSNSHIHYSIIDGNQGSSFTIDP 3387

Query: 196  -SGHISIVDLSALNTSTIQ---LVVVATDTGNPPR 226
              G + +  L  L+   I    L V A+D G+PPR
Sbjct: 3388 VRGEVKVTKL--LDREMISGYTLTVQASDNGSPPR 3420



 Score = 43.1 bits (100), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 55/215 (25%), Positives = 91/215 (42%), Gaps = 19/215 (8%)

Query: 24  DRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLR---VKYW 80
           DR A   ++V   G +    +F++  Y  +  EN+P+   +++++   P +     V Y 
Sbjct: 442 DRKASTKVLVKVLGANSNPPEFTQTAYKAAFDENVPIGTTVMSLSAVDPDEGENGYVTYS 501

Query: 81  LSNDYGERFSISR-QGDISLMQCLDYE-TEDSYRFTVYATDTLMTTSATVN----ISVVN 134
           ++N     F+I    G +S  + LDYE     Y   + A+D  +     V     I++ N
Sbjct: 502 IANLNHVPFAIDHFTGAVSTSENLDYELMPRVYTLRIRASDWGLPYRREVEVLATITLNN 561

Query: 135 VNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYE-KMFSI 193
           +ND  P F     E  +P     DL  G  I  V A D D+   V   +    E  +FS+
Sbjct: 562 LNDNTPLFEKINCEGTIPR----DLGVGEQITTVSAIDADELQLVQYQIEAGNELDLFSL 617

Query: 194 NDSGHI-----SIVDLSALNTSTIQLVVVATDTGN 223
           N +  +     S++D      S   L + ATD  N
Sbjct: 618 NPNSGVLSLKQSLMDGLGAKVSFHSLRITATDGEN 652



 Score = 41.2 bits (95), Expect = 0.95,   Method: Compositional matrix adjust.
 Identities = 54/191 (28%), Positives = 85/191 (44%), Gaps = 30/191 (15%)

Query: 56   ENLPVNYVLLTVTTNKP---RDLRVKYWLSNDYG-ERFSISRQ-GDISLMQCLDYETEDS 110
            E+ PV  +++TV+ +     RD  ++Y + +  G   F I  + G I     LD E+   
Sbjct: 1045 EDAPVGSLVMTVSAHDEDAGRDGEIRYSIRDGSGVGVFKIGEETGVIETSDRLDRESTSH 1104

Query: 111  YRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSV-IG 166
            Y  TV+ATD     +++   + I V +VND  P+   P   ++ P I   + +P  V + 
Sbjct: 1105 YWLTVFATDQGVVPLSSFIEIYIEVEDVNDNAPQTSEP---VYYPEI--MENSPKDVSVV 1159

Query: 167  KVEAADGDKGDRVTLSLRGPYEKMFSINDSGHISIVDLSALNTSTIQ-----------LV 215
            ++EA D D      L       K+ S N  G  SI   + L T+T +           L 
Sbjct: 1160 QIEAFDPDSSSNDKLMY-----KITSGNPQGFFSIHPKTGLITTTSRKLDREQQDEHILE 1214

Query: 216  VVATDTGNPPR 226
            V  TD G PP+
Sbjct: 1215 VTVTDNGIPPK 1225



 Score = 37.7 bits (86), Expect = 8.4,   Method: Compositional matrix adjust.
 Identities = 42/162 (25%), Positives = 72/162 (44%), Gaps = 14/162 (8%)

Query: 45   FSKNEYSVSALENLPVNY-VLLTVTTNKPRDLRVKYWL-----SNDYGERFSISRQGDIS 98
            FS+  YSV   EN PV + VL  V T++        +       ND  + F ++ QG + 
Sbjct: 3440 FSRGNYSVIIQENKPVGFSVLQLVVTDEDSSHNGPPFFFTIVTGNDE-KAFEVNPQGVLL 3498

Query: 99   LMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIP 155
                +  + +D Y   V   D     +++   ++I V+  + + P       E+F+    
Sbjct: 3499 TSSAIKRKEKDHYLLQVKVADNGKPQLSSLTYIDIRVIEESIYPPAIL--PLEIFI--TT 3554

Query: 156  LADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSG 197
              +   G VIGK+ A D D  D +T SL    + +FS++ +G
Sbjct: 3555 SGEEYSGGVIGKIHATDQDVYDTLTYSLDPQMDNLFSVSSTG 3596


>gi|297674808|ref|XP_002815402.1| PREDICTED: protocadherin Fat 1 [Pongo abelii]
          Length = 4588

 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 63/213 (29%), Positives = 104/213 (48%), Gaps = 18/213 (8%)

Query: 33   VSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTV-TTNKPRDL--RVKYWLSNDYG-ER 88
            V+  G +L    F +NEY V   EN P++ +++ V TT+    +   V Y + ND+  +R
Sbjct: 2480 VTVIGGNLHSPAFLQNEYEVELAENAPLHTLVMEVKTTDGDSGIYGHVTYHIVNDFAKDR 2539

Query: 89   FSISRQGDISLMQCLDYET--EDSYRFTVYATDTLMTTS-ATVNISVVNVNDWDPRFRYP 145
            F I+ +G I  ++ LD ET  E      + A D     +  TVN+ + + ND  P+FR  
Sbjct: 2540 FYINERGQIFTLEKLDRETPAEKVISVRLMAKDAGGKVAFCTVNVILTDDNDNAPQFRAT 2599

Query: 146  QYELFLPHIPLADLTPGSVIGKVEAADGDKGDR--VTLSLRGPYEKM---FSIND-SGHI 199
            +YE+ +     +    G+ + KV A+D D+G    +T ++    E +     IN  SG I
Sbjct: 2600 KYEVNIG----SSAAKGTSVIKVLASDADEGSNADITYAIEADSESVKENLEINKLSGVI 2655

Query: 200  SIVD-LSALNTSTIQLVVVATDTGNPPRQASVP 231
            +  + L  L        V A D G+P +++ VP
Sbjct: 2656 TTKESLIGLENEFFTFFVRAVDNGSPSKESVVP 2688



 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/156 (25%), Positives = 77/156 (49%), Gaps = 11/156 (7%)

Query: 33   VSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWL---SNDYGERF 89
            +SK   S   + F ++ ++ + +E+ PV +++  ++   P    +  W      +Y   F
Sbjct: 1346 ISKPKPSPEPISFEESFFTFTVMESDPVAHMIGVISVEPPG---IPLWFDITGGNYDSHF 1402

Query: 90   SISR-QGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYE 148
             + +  G I + + LD E + +Y  TV ATD   T    V I V++ ND  P+F   +YE
Sbjct: 1403 DVDKGTGTIIVAKPLDAEQKSNYNLTVEATDGTTTILTQVFIKVIDTNDHRPQFSTSKYE 1462

Query: 149  LFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR 184
            + +P     D  P + I ++ A D D+ +++  +L+
Sbjct: 1463 VVIPE----DTAPETEILQISAVDQDEKNKLIYTLQ 1494



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 62/246 (25%), Positives = 107/246 (43%), Gaps = 44/246 (17%)

Query: 4    EDDFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYV 63
            E++F    T  VRA+   +  + ++  + V       +  +FS+  YS +  E++P+   
Sbjct: 2665 ENEFF---TFFVRAVDNGSPSKESVVPVYVKILPPERQLPKFSEPFYSYTVSEDMPIGTE 2721

Query: 64   LLTVTTNKPRDLRVKYWL------SNDYGERFSISRQ-GDISLMQCLDYETEDSYRFTVY 116
            +  +         V Y L       ++  E F I RQ G + L + LD+ET   Y+F++ 
Sbjct: 2722 IDLIQAE--HSGTVLYSLVKGKTPESNRDESFVIDRQSGRLKLEKSLDHETTKWYQFSIL 2779

Query: 117  AT----DTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAAD 172
            A     D  M  S  V+I V + ND  P F    YE F+    + +L  GS + ++ A+D
Sbjct: 2780 ARCTQDDHEMVASVDVSIQVKDANDNSPVFESSPYEAFI----VENLPGGSRVIQIRASD 2835

Query: 173  GDKGDRVTLSLRGPYEKMFSINDSGHISIVDLSALNTST----------------IQLVV 216
             D G    +        M+S++ S  + +++  A+N  T                 Q+ V
Sbjct: 2836 ADSGTNGQV--------MYSLDQSQSVEVIESFAINMETGWITTLKELDHEKRDNYQIKV 2887

Query: 217  VATDTG 222
            VA+D G
Sbjct: 2888 VASDHG 2893



 Score = 55.8 bits (133), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 62/215 (28%), Positives = 102/215 (47%), Gaps = 21/215 (9%)

Query: 27   ALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLS---- 82
            A  T++VS    +     F   EY  +  E++ V   +L V     RD+     ++    
Sbjct: 3212 ATGTVVVSVLDINDNPPVFEYREYGATVSEDIVVGTEVLQVYAAS-RDIEANAEITYSII 3270

Query: 83   --NDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVN 136
              N++G +FSI S+ G + +++ LDYE+   Y  TV ATD     ++  ATVNI+V ++N
Sbjct: 3271 SGNEHG-KFSIDSKTGAVFIIENLDYESSHEYYLTVEATDGGTPSLSDVATVNINVTDIN 3329

Query: 137  DWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSL-RGPYEKMFSIND 195
            D  P F    Y   +    + + +  +V+   + ADG     +  S+  G     F+I+ 
Sbjct: 3330 DNTPVFSQDTYTTVISEDAVLEQSVITVMA--DDADGPSNSHIHYSIVDGNQGSSFTIDP 3387

Query: 196  -SGHISIVDLSALNTSTIQ---LVVVATDTGNPPR 226
              G + +  L  L+  TI    L V A+D G+PPR
Sbjct: 3388 VRGEVKVTKL--LDRETISGYTLTVQASDNGSPPR 3420



 Score = 54.7 bits (130), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 56/201 (27%), Positives = 93/201 (46%), Gaps = 23/201 (11%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSN-DYGERFSIS-RQGDISLMQC 102
            F K  YS    EN+ V+  ++ V  N P  L+V Y +++ D   +F+I+   G I+++  
Sbjct: 2182 FEKPFYSAEIAENIQVHSPVVHVQANSPEGLKVFYSITDGDPFGQFTINFNTGVINVIAP 2241

Query: 103  LDYETEDSYRFTVYATDTLMTTSATVNISVV--NVNDWDPRFRYPQYELFLPHIPLADLT 160
            LD+E   +Y+ ++ ATD+L    A V + ++  ++ND  P F    Y         A L+
Sbjct: 2242 LDFEAHPAYKLSIRATDSLTGAHAEVFVDIIVEDINDNPPVFAQQSY--------AATLS 2293

Query: 161  PGSVIG----KVEAADGDKGDRVTLS------LRGPYEKMFSINDSGHISIVD-LSALNT 209
              SVIG    +V A D D      +S      L   ++     + +G IS++  L    +
Sbjct: 2294 EASVIGTSVVQVRATDSDSEPNRGISYQMFGNLSKSHDHFHVDSSTGLISLLRTLDYEQS 2353

Query: 210  STIQLVVVATDTGNPPRQASV 230
                + V A D G PP  + V
Sbjct: 2354 RQHTIFVRAVDGGMPPLSSDV 2374



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 42/145 (28%), Positives = 69/145 (47%), Gaps = 8/145 (5%)

Query: 90   SISRQGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYEL 149
            +I  +  + + + LD E  D+Y  T+ ATD   ++ A V + V++ ND  P      Y  
Sbjct: 2971 NIQNEWKVYVKKPLDREKRDNYLLTITATDGTFSSKAVVEVKVLDANDNSPVCEKTLYSD 3030

Query: 150  FLPHIPLADLTPGSVIGKVEAADGD--KGDRVTLSLRGPYEKMFSIN-DSGHI-SIVDLS 205
             +P     D+ PG +I ++ A D D      +T +L G   + F +N D+G + +   L 
Sbjct: 3031 TIPE----DVLPGKLIMQISATDADIRSNAEITYTLLGSGAEKFKLNPDTGELRTSTPLD 3086

Query: 206  ALNTSTIQLVVVATDTGNPPRQASV 230
                +   L+V ATD G    QAS+
Sbjct: 3087 REEQAVYHLLVRATDGGGRFCQASI 3111



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 63/225 (28%), Positives = 108/225 (48%), Gaps = 19/225 (8%)

Query: 13   LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENL-PVNYVLLTVTTNK 71
            L+VRA   D   R+  A+++++    +    +FS + Y+V+  EN  P   +     T+ 
Sbjct: 3095 LLVRAT--DGGGRFCQASIVLTLEDVNDNAPEFSVDPYAVTVFENTEPGTLLTRAQATDA 3152

Query: 72   PRDL--RVKYWLSNDYGERFSISR-QGDISLMQCLDYETEDSYRFTVYATDT----LMTT 124
               L  ++ Y L +    +FSI+   G I L + LD E +  Y  ++ A D      +T 
Sbjct: 3153 DTGLNRKILYSLIDSADGQFSINELSGIIQLEKPLDRELQAVYTLSLKAVDQGLLRRLTA 3212

Query: 125  SATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAA--DGDKGDRVTLS 182
            + TV +SV+++ND  P F Y +Y   +      D+  G+ + +V AA  D +    +T S
Sbjct: 3213 TGTVVVSVLDINDNPPVFEYREYGATVSE----DIVVGTEVLQVYAASRDIEANAEITYS 3268

Query: 183  -LRGPYEKMFSIND-SGHISIVD-LSALNTSTIQLVVVATDTGNP 224
             + G     FSI+  +G + I++ L   ++    L V ATD G P
Sbjct: 3269 IISGNEHGKFSIDSKTGAVFIIENLDYESSHEYYLTVEATDGGTP 3313



 Score = 44.7 bits (104), Expect = 0.071,   Method: Compositional matrix adjust.
 Identities = 39/142 (27%), Positives = 68/142 (47%), Gaps = 16/142 (11%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYG----ERFSISRQ-GD 96
            F  + Y    +ENLP    ++ +     +   + +V Y L         E F+I+ + G 
Sbjct: 2809 FESSPYEAFIVENLPGGSRVIQIRASDADSGTNGQVMYSLDQSQSVEVIESFAINMETGW 2868

Query: 97   ISLMQCLDYETEDSYRFTVYATD----TLMTTSATVNISVVNVNDWDPRFRYPQYELFLP 152
            I+ ++ LD+E  D+Y+  V A+D      ++++A V+++V +VND  PRF    Y+  + 
Sbjct: 2869 ITTLKELDHEKRDNYQIKVVASDHGEMIQLSSTAIVDVTVTDVNDSPPRFTAEIYKGTVS 2928

Query: 153  HIPLADLTPGSVIGKVEAADGD 174
                 D  PG VI  +   D D
Sbjct: 2929 E----DDPPGGVIAILSTTDAD 2946



 Score = 44.7 bits (104), Expect = 0.084,   Method: Compositional matrix adjust.
 Identities = 56/215 (26%), Positives = 92/215 (42%), Gaps = 19/215 (8%)

Query: 24  DRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLR---VKYW 80
           DR A   ++V   G +    +F++  Y  +  EN+P+   +++++   P +     V Y 
Sbjct: 442 DRKASTKVLVKVLGANSNPPEFTQTAYKAAFDENVPIGTTVMSLSAVDPDEGENGYVTYS 501

Query: 81  LSNDYGERFSISR-QGDISLMQCLDYE-TEDSYRFTVYATDTLMTTSATVN----ISVVN 134
           ++N     F+I    G +S  + LDYE     Y   + A+D  +     V     I++ N
Sbjct: 502 IANLNHVPFAIDHFTGAVSTSENLDYELMPRVYTLRIRASDWGLPYRREVEVLATITLNN 561

Query: 135 VNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYE-KMFSI 193
           +ND  P F     E  +P     DL  G  I  V A D D+   V   +    E  +FS+
Sbjct: 562 LNDNTPLFEKINCEGTIPR----DLGVGEQITTVSAIDADELQLVQYQIEAGNELDLFSL 617

Query: 194 NDSGHI-----SIVDLSALNTSTIQLVVVATDTGN 223
           N +  +     S++D  A   S   L + ATD  N
Sbjct: 618 NPNSGVLSLKQSLMDGLAAKVSFHSLRITATDGEN 652



 Score = 41.6 bits (96), Expect = 0.62,   Method: Compositional matrix adjust.
 Identities = 55/195 (28%), Positives = 86/195 (44%), Gaps = 20/195 (10%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTTNKPRDL----RVKYWLSNDYGERFSI-SRQGDIS 98
            +F +  Y V   E+  V+  ++ V     +DL     V Y +  D  + FSI S  G + 
Sbjct: 821  EFLQESYFVEVSEDKEVHSEIIQVEATD-KDLGPNGHVTYSILTD-TDAFSIDSVTGVVK 878

Query: 99   LMQCLDYETEDSYRFTVYATDTL-----MTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
            + + LD E +  +   + A D       + ++  + +S+ +VND  P+F  P Y + +  
Sbjct: 879  ITRPLDRELQHEHYLKIEARDQAREEPQLFSTVILKVSLEDVNDNPPKFIPPNYRVKV-- 936

Query: 154  IPLADLTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSIND-SGHISIV-DLSALNT 209
                DL  G+VI  +EA D D G   +V  SL    E  F ++  SG + IV  L     
Sbjct: 937  --REDLPEGTVIMWLEAQDPDLGQSGQVRYSLMDHGEGNFDVDKLSGAVRIVQQLDFEKK 994

Query: 210  STIQLVVVATDTGNP 224
                L V A D G P
Sbjct: 995  QVYNLTVRAKDKGKP 1009



 Score = 40.8 bits (94), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 53/191 (27%), Positives = 85/191 (44%), Gaps = 30/191 (15%)

Query: 56   ENLPVNYVLLTVTTNKP---RDLRVKYWLSNDYG-ERFSISRQ-GDISLMQCLDYETEDS 110
            E+ P+  +++TV+ +     RD  + Y + +  G   F I  + G I     LD E+   
Sbjct: 1045 EDAPIGSLVMTVSAHDEDAGRDGEIHYSIRDGSGVGVFKIGEETGVIETSDRLDRESTSH 1104

Query: 111  YRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSV-IG 166
            Y  TV+ATD     +++   + I V +VND  P+   P   ++ P I   + +P  V + 
Sbjct: 1105 YWLTVFATDQGVVPLSSFIEIYIEVEDVNDNAPQTSEP---VYYPEI--MENSPKDVSVV 1159

Query: 167  KVEAADGDKGDRVTLSLRGPYEKMFSINDSGHISIVDLSALNTSTIQ-----------LV 215
            ++EA D D      L       K+ S N  G  SI   + L T+T +           L 
Sbjct: 1160 QIEAFDPDSSSNDKLMY-----KITSGNPQGFFSIHPKTGLITTTSRKLDREQQDEHILE 1214

Query: 216  VVATDTGNPPR 226
            V  TD G+PP+
Sbjct: 1215 VTVTDNGSPPK 1225



 Score = 39.7 bits (91), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 42/162 (25%), Positives = 73/162 (45%), Gaps = 14/162 (8%)

Query: 45   FSKNEYSVSALENLPVNY-VLLTVTTNKPRDLRVKYWL-----SNDYGERFSISRQGDIS 98
            FS+  YSV   EN PV + VL  V T++        +       ND  + F +++QG + 
Sbjct: 3440 FSRGNYSVIIQENKPVGFSVLQLVVTDEDSSHNGPPFFFTIVTGNDE-KAFEVNQQGVLL 3498

Query: 99   LMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIP 155
                +  + +D Y   V   D     +++   ++I V+  + + P       E+F+    
Sbjct: 3499 TSSAIKRKEKDHYLLQVKVADNGKPQLSSLTYIDIRVIEESIYPPAIL--PLEIFI--TA 3554

Query: 156  LADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSG 197
              +   G VIGK+ A D D  D +T SL    + +FS++ +G
Sbjct: 3555 SGEEYSGGVIGKIHATDQDVYDTLTYSLDPQMDNLFSVSSTG 3596



 Score = 38.1 bits (87), Expect = 7.3,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 56/127 (44%), Gaps = 19/127 (14%)

Query: 45   FSKNEYSVSALENLPVNYVLLT--------VTTNKPRD---LRVKYWLSNDYGERFSI-S 92
            F + EY+    E+  +N V+LT          T+  +D   L V + +     + F+I S
Sbjct: 1765 FMQAEYTGLISESASINSVVLTDRNIPLVIRATDADKDSNALLVYHIVEPSVHKYFAIDS 1824

Query: 93   RQGDISLMQCLDYETEDSYRFTVYATDT-----LMTTSATVNISVVNVNDWDPRFRYPQY 147
              G I  +  LDYE    + FTV   D          +A V + V+++ND  P F  P Y
Sbjct: 1825 STGAIHTVLSLDYEETSIFHFTVQVHDMGTPRLFAEYAANVTVHVIDINDCPPVFAKPLY 1884

Query: 148  E--LFLP 152
            E  L LP
Sbjct: 1885 EASLLLP 1891


>gi|149065690|gb|EDM15563.1| rCG59452 [Rattus norvegicus]
          Length = 3034

 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 62/229 (27%), Positives = 106/229 (46%), Gaps = 22/229 (9%)

Query: 13  LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTT--- 69
           L V A+ + +  R A   L V+ + T+     F ++EY     ENL V Y +LT+     
Sbjct: 336 LKVSAVDHGSPRRSAATYLTVTVSDTNDHSPVFEQSEYRERIRENLEVGYEVLTIRATDG 395

Query: 70  NKPRDLRVKYWLSNDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDT-----LMT 123
           + P +  ++Y L    G  F I +R G +     +D E    Y+  V A D       ++
Sbjct: 396 DAPSNANMRYRLLEGAGGVFEIDARSGVVRTRAVVDREEAAEYQLLVEANDQGRNPGPLS 455

Query: 124 TSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS- 182
            SATV+I V + ND  P+F   +Y + +P     D+   + + +V+A D D+G    +  
Sbjct: 456 ASATVHIVVEDENDNYPQFSEKRYVVQVPE----DVAVNTPVLRVQATDRDQGQNAAIHY 511

Query: 183 --LRGPYEKMFSIND-SGHISIV---DLSALNTSTIQLVVVATDTGNPP 225
             + G  +  F ++  SG + ++   D  A+   T++  + A D G PP
Sbjct: 512 SIVSGNLKGQFYLHSLSGSLDVINPLDFEAIREYTLR--IKAQDGGRPP 558



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 53/191 (27%), Positives = 88/191 (46%), Gaps = 14/191 (7%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRDLR--VKYWLSN-DYGERFSISRQ---GDIS 98
           F++  Y +   E+  V   +LT+   + RD    + Y L+  +   RF++S Q   G I+
Sbjct: 702 FTQPVYELRLNEDAAVGSSVLTLRA-RDRDANSVITYQLTGGNTRNRFALSSQSGGGLIT 760

Query: 99  LMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLAD 158
           L   LDY+ E  Y   V A+D   + +A V I+V + N   P F+   Y + +      D
Sbjct: 761 LALPLDYKQERQYVLAVTASDGTRSHTAQVFINVTDANTHRPVFQSSHYTVSVSE----D 816

Query: 159 LTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSINDSGHI-SIVDLSALNTSTIQLV 215
              G+ I  + A D D G+  R+T  L  P  +     D+G I ++ +L   + +   L 
Sbjct: 817 RPVGTSIATISATDEDTGENARITYVLEDPVPQFRIDPDTGTIYTMTELDYEDQAAYTLA 876

Query: 216 VVATDTGNPPR 226
           + A D G P +
Sbjct: 877 ITAQDNGIPQK 887



 Score = 48.1 bits (113), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 49/168 (29%), Positives = 76/168 (45%), Gaps = 33/168 (19%)

Query: 45  FSKNEYSVSALENLPVNYVLL---TVTTNKPRDLRVKYWLSN------------------ 83
           F  + +  + LEN+P+ + +L    V  +   + R++Y L +                  
Sbjct: 580 FVSSPFQAAVLENVPLGHSVLHIQAVDADAGENARLQYRLVDTASTILGGSSIDSENPVS 639

Query: 84  --DYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVND 137
             D+   F I +  G I++   LD E  + Y F V A D     M++SA+V+I+V++VND
Sbjct: 640 APDF--PFQIHNSSGWITVCAELDRELLEHYSFGVEAVDHGSPPMSSSASVSITVLDVND 697

Query: 138 WDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRG 185
            DP F  P YEL L      D   GS +  + A D D    +T  L G
Sbjct: 698 NDPVFTQPVYELRLNE----DAAVGSSVLTLRARDRDANSVITYQLTG 741



 Score = 45.8 bits (107), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 38/140 (27%), Positives = 65/140 (46%), Gaps = 9/140 (6%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWL-SNDYGERFSISR-QGDISL 99
            F K+E  +   EN PV  V+  +  N P +    ++ Y +   +  E F +    GD+  
Sbjct: 1014 FEKDELELFVEENSPVGSVVARIRANDPDEGPNAQIMYQIVEGNVPEVFQLDLLSGDLRA 1073

Query: 100  MQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPH--IPLA 157
            +  LD+E    Y   V AT   + + ATV+I +++ ND  P    P +++   +     +
Sbjct: 1074 LVELDFEVRRDYMLVVQATSAPLVSRATVHIRLLDQNDNPPEL--PDFQILFNNYVTNKS 1131

Query: 158  DLTPGSVIGKVEAADGDKGD 177
            +  P  VIG++ A D D  D
Sbjct: 1132 NSFPSGVIGRIPAHDPDLSD 1151



 Score = 43.5 bits (101), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 58/231 (25%), Positives = 97/231 (41%), Gaps = 24/231 (10%)

Query: 22  NQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDL---RVK 78
           +Q R  +       AG+S    QF    Y VS  EN P    ++ +  + P +    R+ 
Sbjct: 238 SQPRAGVVRRSRRGAGSSTSP-QFPLPSYQVSVPENEPAGTAVIELRAHDPDEGEAGRLS 296

Query: 79  YWLSNDYGER----FSI-SRQGDISLMQCLDYETEDSYRFTVYATD--TLMTTSAT-VNI 130
           Y +   + ER    F I +  G ++  + LD ET+D++   V A D  +   ++AT + +
Sbjct: 297 YQMEALFDERSNGYFLIDATTGAVTTARALDRETKDTHVLKVSAVDHGSPRRSAATYLTV 356

Query: 131 SVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR--GPYE 188
           +V + ND  P F   +Y   +      +L  G  +  + A DGD      +  R      
Sbjct: 357 TVSDTNDHSPVFEQSEYRERI----RENLEVGYEVLTIRATDGDAPSNANMRYRLLEGAG 412

Query: 189 KMFSINDSGHI----SIVDLSALNTSTIQLVVVATDTGNPPRQASVPAIMH 235
            +F I+    +    ++VD      +  QL+V A D G  P   S  A +H
Sbjct: 413 GVFEIDARSGVVRTRAVVDRE--EAAEYQLLVEANDQGRNPGPLSASATVH 461


>gi|449506248|ref|XP_004186131.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin-15 [Taeniopygia
           guttata]
          Length = 2195

 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 60/195 (30%), Positives = 101/195 (51%), Gaps = 14/195 (7%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSN-DYGERFSISRQ-GDISLMQ 101
           +F +  YS+   E + +  VLL +         +KY + N D  + F++S+  G ++L +
Sbjct: 615 RFPQLMYSLEVSEAMRIGAVLLNLQAFDREGDPIKYLIQNGDPQQVFNLSQSSGLLALGK 674

Query: 102 CLDYETEDSYRFTVYATDTL--MTTSATVNISVVNVNDWDPRFRYPQYELFLP-HIPLAD 158
            LD E+ D Y   V A+D     T++ATVNI V +VND  P F     ++FLP ++ + +
Sbjct: 675 PLDRESTDRYILIVTASDGRPDGTSTATVNIVVTDVNDNGPVF-----DMFLPKNLSVQE 729

Query: 159 LTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDSGHI-SIVDLSALNTSTIQLV 215
               + +G+V A D D G   +V  SL   +  +F I  +G I + V L+       +L+
Sbjct: 730 EEANAFVGQVRATDADAGVNGQVHYSLAN-FNNLFRITSNGSIYTAVKLNREVRDYYELI 788

Query: 216 VVATDTGNPPRQASV 230
           V ATD    PR++++
Sbjct: 789 VEATDGAVDPRRSTL 803



 Score = 58.2 bits (139), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 63/201 (31%), Positives = 99/201 (49%), Gaps = 26/201 (12%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDL--RVKYWLSNDYGER-FSISRQ-GDISLM 100
            F+   Y+V   ENLP   V L +   K  DL   V Y +  +   + F+++R  G++SL 
Sbjct: 819  FTNASYTVCVPENLPPGTVFLQLEA-KDVDLGADVNYRIRTEEARQYFALNRHTGELSLR 877

Query: 101  QCLDYE----TEDSYRFTVYATDTLMTTS---ATVNISVVNVNDWDPRFRYPQYELFLPH 153
            + LDYE    TE ++ F V A D+  T     ATV + V ++ND+ P F    Y   +  
Sbjct: 878  KSLDYESFSDTEATFTFLVEAFDSKGTMPPGLATVTVRVKDMNDYSPEFSQKLYRGMV-- 935

Query: 154  IPLADLTPGSVIGKVEAADGDK-GDRVTLS------LRGPYE-KMFSIND-SGHI-SIVD 203
                D   G+VI  V A D D  G   +L       ++ PY   +F + + SG + + V+
Sbjct: 936  --APDAVKGTVITTVSAEDRDPPGTPASLVRYKVDVVQFPYSASIFDVEENSGRVVTRVN 993

Query: 204  LSALNTSTIQLVVVATDTGNP 224
            L+   ++  +LVV+A D G+P
Sbjct: 994  LNEEPSTVFKLVVIAYDDGDP 1014



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 65/247 (26%), Positives = 116/247 (46%), Gaps = 29/247 (11%)

Query: 6   DFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPV----- 60
           D  Q   LV++A Q +     A A L +     + ++  F+++ Y    LE+ PV     
Sbjct: 356 DLHQKFDLVIKAEQDNGHPLPAFANLHIEILDENNQKPYFTRSTYEGFILESSPVGTTIS 415

Query: 61  ---------NYVLLTVTTNKPRDLRVKYWLSNDYGERFSISRQG---DISLMQCLDYETE 108
                      V+L     + +D ++  +L NDY   F++++ G    ++L+Q +D E +
Sbjct: 416 DNQNLTSPLQLVVLDNDVEETKDPQLHLFL-NDYTTFFTVTQSGITRYLTLLQPVDREVQ 474

Query: 109 DSYRFTVYATDTLM-TTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGK 167
             Y F++ A+D +  +   TVNI V++ ND  P F    Y + +      D+ PG  + K
Sbjct: 475 QLYTFSMTASDGVQESVPVTVNILVIDANDNSPTFSNISYSVKI----YTDMKPGESVIK 530

Query: 168 VEAADGDKG--DRVTLSLRGPYEKMFSIND-SGHISIVD--LSALNTSTIQLVVVATDTG 222
           + A D D+G   ++   +    +  F+IN  +G I+I    L A+  S   L V A+D+ 
Sbjct: 531 LTAVDADEGANGQIVYEILAGDQGDFTINKHTGLITIAPGVLLAVGRS-YALTVRASDSA 589

Query: 223 NPPRQAS 229
            P ++ S
Sbjct: 590 PPAQRRS 596



 Score = 46.6 bits (109), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 48/167 (28%), Positives = 81/167 (48%), Gaps = 17/167 (10%)

Query: 76  RVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDTLM---TTSATVNISV 132
           +V Y L+N +   F I+  G I     L+ E  D Y   V ATD  +    ++ T+ I V
Sbjct: 751 QVHYSLAN-FNNLFRITSNGSIYTAVKLNREVRDYYELIVEATDGAVDPRRSTLTLAIKV 809

Query: 133 VNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKM-F 191
           ++++D  P F    Y + +P     +L PG+V  ++EA D D G  V   +R    +  F
Sbjct: 810 LDIDDNSPVFTNASYTVCVPE----NLPPGTVFLQLEAKDVDLGADVNYRIRTEEARQYF 865

Query: 192 SIN-DSGHISI---VDLSALN--TSTIQLVVVATDTGN--PPRQASV 230
           ++N  +G +S+   +D  + +   +T   +V A D+    PP  A+V
Sbjct: 866 ALNRHTGELSLRKSLDYESFSDTEATFTFLVEAFDSKGTMPPGLATV 912


>gi|397506036|ref|XP_003823543.1| PREDICTED: protocadherin Fat 1 [Pan paniscus]
          Length = 4588

 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 63/213 (29%), Positives = 104/213 (48%), Gaps = 18/213 (8%)

Query: 33   VSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTV-TTNKPRDL--RVKYWLSNDYG-ER 88
            V+  G +L    F +NEY V   EN P++ +++ V TT+    +   V Y + ND+  +R
Sbjct: 2480 VTVIGGNLHSPAFLQNEYEVELAENAPLHTLVMEVKTTDGDSGIYGHVTYHIVNDFAKDR 2539

Query: 89   FSISRQGDISLMQCLDYET--EDSYRFTVYATDTLMTTS-ATVNISVVNVNDWDPRFRYP 145
            F I+ +G I  ++ LD ET  E      + A D     +  TVN+ + + ND  P+FR  
Sbjct: 2540 FYINERGQIFTLEKLDRETPAEKVISVRLMAKDAGGKVAFCTVNVILTDDNDNAPQFRAT 2599

Query: 146  QYELFLPHIPLADLTPGSVIGKVEAADGDKGDR--VTLSLRGPYEKM---FSIND-SGHI 199
            +YE+ +     +    G+ + KV A+D D+G    +T ++    E +     IN  SG I
Sbjct: 2600 KYEVNIG----SSAAKGTSVIKVLASDADEGSNADITYAIEADSESVKENLEINKLSGVI 2655

Query: 200  SIVD-LSALNTSTIQLVVVATDTGNPPRQASVP 231
            +  + L  L        V A D G+P +++ VP
Sbjct: 2656 TTKESLIGLENEFFTFFVRAVDNGSPSKESVVP 2688



 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/156 (25%), Positives = 77/156 (49%), Gaps = 11/156 (7%)

Query: 33   VSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWL---SNDYGERF 89
            +SK   S   + F ++ ++ + +E+ PV +++  ++   P    +  W      +Y   F
Sbjct: 1346 ISKPKPSPEPISFEESFFTFTVMESDPVAHMIGVISVEPPG---IPLWFDITGGNYDSHF 1402

Query: 90   SISR-QGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYE 148
             + +  G I + + LD E + +Y  TV ATD   T    V I V++ ND  P+F   +YE
Sbjct: 1403 DVDKGTGTIIVAKPLDAEQKSNYNLTVEATDGTTTILTQVFIKVIDTNDHRPQFSTSKYE 1462

Query: 149  LFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR 184
            + +P     D  P + I ++ A D D+ +++  +L+
Sbjct: 1463 VVIPE----DTAPETEILQISAVDQDEKNKLIYTLQ 1494



 Score = 58.2 bits (139), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 59/244 (24%), Positives = 106/244 (43%), Gaps = 40/244 (16%)

Query: 4    EDDFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYV 63
            E++F    T  VRA+   +  + ++  + V      ++  +FS+  Y+ +  E++P+   
Sbjct: 2665 ENEFF---TFFVRAVDNGSPSKESVVPVYVKILPPEMQLPKFSEPFYTFTVSEDVPIGTE 2721

Query: 64   LLTVTTNKPRDLRVKYWLSN----DYGERFSISRQ-GDISLMQCLDYETEDSYRFTVYAT 118
            +  +       +       N    +  E F I RQ G + L + LD+ET   Y+F++ A 
Sbjct: 2722 IDLIRAEHSGTVLYSLVKGNTPESNRDESFVIDRQSGRLKLEKSLDHETTKWYQFSILAR 2781

Query: 119  ----DTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGD 174
                D  M  S  V+I V + ND  P F    YE F+    + +L  GS + ++ A+D D
Sbjct: 2782 CTQDDHEMVASVDVSIQVKDANDNSPVFESSPYEAFI----VENLPGGSRVIQIRASDAD 2837

Query: 175  KGDRVTLSLRGPYEKMFSINDSGHISIVDLSALNTST----------------IQLVVVA 218
             G    +        M+S++ S  + +++  A+N  T                 Q+ VVA
Sbjct: 2838 SGTNGQV--------MYSLDQSQSVEVIESFAINMETGWITTLKELDHEKRDNYQIKVVA 2889

Query: 219  TDTG 222
            +D G
Sbjct: 2890 SDHG 2893



 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 58/201 (28%), Positives = 96/201 (47%), Gaps = 23/201 (11%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSN-DYGERFSIS-RQGDISLMQC 102
            F K  YS    EN+ V+  ++ V  N P  L+V Y +++ D   +F+I+   G I+++  
Sbjct: 2182 FEKPFYSAEIAENIQVHSPVVHVQANSPEGLKVFYSITDGDPFSQFTINFNTGVINVIAP 2241

Query: 103  LDYETEDSYRFTVYATDTLMTTSATVNISVV--NVNDWDPRFRYPQYELFLPHIPLADLT 160
            LD+E   +Y+ ++ ATD+L    A V + ++  ++ND  P F    Y         A L+
Sbjct: 2242 LDFEAHPAYKLSIRATDSLTGAHAEVFVDIIVEDINDNSPVFAQQSY--------AATLS 2293

Query: 161  PGSVIG----KVEAADGDK--GDRVTLSLRGPYEK---MFSINDS-GHISIVD-LSALNT 209
              SVIG    +V A D D      ++  + G + K    F ++ S G IS++  L    +
Sbjct: 2294 EASVIGTSVVQVRATDSDSEPNRGISYQMFGNHSKSHDHFHVDSSTGLISLLRTLDYEQS 2353

Query: 210  STIQLVVVATDTGNPPRQASV 230
                + V A D G PP  + V
Sbjct: 2354 RQHTIFVRAVDGGMPPLSSDV 2374



 Score = 55.1 bits (131), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 61/215 (28%), Positives = 102/215 (47%), Gaps = 21/215 (9%)

Query: 27   ALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLS---- 82
            A  T++VS    +     F   EY  +  E++ V   +L V     RD+     ++    
Sbjct: 3212 ATGTVVVSVLDINDNPPVFEYREYGATVSEDILVGTEVLQVYAAS-RDIEANAEITYSII 3270

Query: 83   --NDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVN 136
              N++G +FSI S+ G + +++ LDYE+   Y  TV ATD     ++  ATVN++V ++N
Sbjct: 3271 SGNEHG-KFSIDSKTGAVFIIENLDYESSHEYYLTVEATDGGTPSLSDVATVNVNVTDIN 3329

Query: 137  DWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS-LRGPYEKMFSIND 195
            D  P F    Y   +    + + +  +V+   + ADG     +  S + G     F+I+ 
Sbjct: 3330 DNTPVFSQDTYTTVISEDAVLEQSVITVMA--DDADGPSNSHIHYSIIDGNQGSSFTIDP 3387

Query: 196  -SGHISIVDLSALNTSTIQ---LVVVATDTGNPPR 226
              G + +  L  L+  TI    L V A+D G+PPR
Sbjct: 3388 VRGEVKVTKL--LDRETISGYTLTVQASDNGSPPR 3420



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 61/225 (27%), Positives = 108/225 (48%), Gaps = 19/225 (8%)

Query: 13   LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVT---T 69
            L+VRA   D   R+  A+++++    +    +FS + Y+++  EN     +L  V     
Sbjct: 3095 LLVRAT--DGGGRFCQASVVLTLEDVNDNAPEFSADPYAITVFENTEPGTLLTRVQATDA 3152

Query: 70   NKPRDLRVKYWLSNDYGERFSISR-QGDISLMQCLDYETEDSYRFTVYATDT----LMTT 124
            +   + ++ Y L +    +FSI+   G I L + LD E +  Y  ++ A D      +T 
Sbjct: 3153 DAGLNRKILYSLIDSADGQFSINELSGIIQLEKPLDRELQAVYTLSLKAVDQGLPRRLTA 3212

Query: 125  SATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAA--DGDKGDRVTLS 182
            + TV +SV+++ND  P F Y +Y   +      D+  G+ + +V AA  D +    +T S
Sbjct: 3213 TGTVVVSVLDINDNPPVFEYREYGATVSE----DILVGTEVLQVYAASRDIEANAEITYS 3268

Query: 183  -LRGPYEKMFSIND-SGHISIVD-LSALNTSTIQLVVVATDTGNP 224
             + G     FSI+  +G + I++ L   ++    L V ATD G P
Sbjct: 3269 IISGNEHGKFSIDSKTGAVFIIENLDYESSHEYYLTVEATDGGTP 3313



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 44/145 (30%), Positives = 67/145 (46%), Gaps = 8/145 (5%)

Query: 90   SISRQGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYEL 149
            +I  +  + + + LD E  D+Y  T+ ATD   ++ A V + V++ ND  P      Y  
Sbjct: 2971 NIQNEWKVYVKKPLDREKRDNYLLTITATDGTFSSKAIVEVKVLDANDNSPVCEKTLYSD 3030

Query: 150  FLPHIPLADLTPGSVIGKVEAADGD--KGDRVTLSLRGPYEKMFSIN-DSGHISI-VDLS 205
              P     D+ PG +I +V A D D      +T +L G   + F +N D+G +     L 
Sbjct: 3031 TTPE----DVLPGKLILQVSATDADIRSNAEITYTLLGSGAEKFKLNPDTGELKTSTPLD 3086

Query: 206  ALNTSTIQLVVVATDTGNPPRQASV 230
                +   L+V ATD G    QASV
Sbjct: 3087 REEQAVYHLLVRATDGGGRFCQASV 3111



 Score = 43.1 bits (100), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 55/215 (25%), Positives = 91/215 (42%), Gaps = 19/215 (8%)

Query: 24  DRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLR---VKYW 80
           DR A   ++V   G +    +F++  Y  +  EN+P+   +++++   P +     V Y 
Sbjct: 442 DRKASTKVLVKVLGANSNPPEFTQTAYKAAFDENVPIGTTVMSLSAVDPDEGENGYVTYS 501

Query: 81  LSNDYGERFSISR-QGDISLMQCLDYE-TEDSYRFTVYATDTLMTTSATVN----ISVVN 134
           ++N     F+I    G +S  + LDYE     Y   + A+D  +     V     I++ N
Sbjct: 502 IANLNHVPFAIDHFTGAVSTSENLDYELMPRVYTLRIRASDWGLPYRREVEVLATITLNN 561

Query: 135 VNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYE-KMFSI 193
           +ND  P F     E  +P     DL  G  I  V A D D+   V   +    E  +FS+
Sbjct: 562 LNDNTPLFEKINCEGTIPR----DLGVGEQITTVSAIDADELQLVQYQIEAGNELDLFSL 617

Query: 194 NDSGHI-----SIVDLSALNTSTIQLVVVATDTGN 223
           N +  +     S++D      S   L + ATD  N
Sbjct: 618 NPNSGVLSLKQSLMDGLGAKVSFHSLRITATDGEN 652



 Score = 42.7 bits (99), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 54/191 (28%), Positives = 86/191 (45%), Gaps = 30/191 (15%)

Query: 56   ENLPVNYVLLTVTTNKP---RDLRVKYWLSNDYG-ERFSISRQ-GDISLMQCLDYETEDS 110
            E+ PV  +++TV+ +     RD  ++Y + +  G   F I  + G I     LD E+   
Sbjct: 1045 EDAPVGSLVMTVSAHDEDAGRDGEIRYSIRDGSGVGVFKIGEETGVIETSDRLDRESTSH 1104

Query: 111  YRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSV-IG 166
            Y  TV+ATD     +++   + I V +VND  P+   P   ++ P I   + +P  V + 
Sbjct: 1105 YWLTVFATDQGVVPLSSFIEIYIEVEDVNDNAPQTSEP---VYYPEI--MENSPKDVSVV 1159

Query: 167  KVEAADGDKGDRVTLSLRGPYEKMFSINDSGHISIVDLSALNTSTIQ-----------LV 215
            ++EA D D      L       K+ S N  G  SI   + L T+T +           L 
Sbjct: 1160 QIEAFDPDSSSNDKLMY-----KITSGNPQGFFSIHPKTGLITTTSRKLDREQQDEHILE 1214

Query: 216  VVATDTGNPPR 226
            V  TD G+PP+
Sbjct: 1215 VTVTDNGSPPK 1225



 Score = 40.8 bits (94), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 56/195 (28%), Positives = 85/195 (43%), Gaps = 20/195 (10%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTTNKPRDL----RVKYWLSNDYGERFSI-SRQGDIS 98
            +F +  Y V   E+  V+  ++ V     +DL     V Y +  D  + FSI S  G + 
Sbjct: 821  EFLQESYFVEVSEDKEVHSEIIQVEATD-KDLGPNGHVTYSILTD-TDTFSIDSVTGVVR 878

Query: 99   LMQCLDYETEDSYRFTVYATDTL-----MTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
            + + LD E +  +   + A D       + ++  V +S+ +VND  P F  P Y + +  
Sbjct: 879  IARPLDRELQHEHYLKIEARDQAREEPQLFSTVVVKVSLEDVNDNPPTFIPPNYRVKV-- 936

Query: 154  IPLADLTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSIND-SGHISIVD-LSALNT 209
                DL  G+VI  +EA D D G   +V  SL    E  F ++  SG + IV  L     
Sbjct: 937  --REDLPEGTVIMWLEAHDPDLGQSGQVRYSLLDHGEGNFDVDKLSGAVRIVQPLDFEKK 994

Query: 210  STIQLVVVATDTGNP 224
                L V A D G P
Sbjct: 995  QVYNLTVRAKDKGKP 1009



 Score = 37.7 bits (86), Expect = 8.6,   Method: Compositional matrix adjust.
 Identities = 42/162 (25%), Positives = 72/162 (44%), Gaps = 14/162 (8%)

Query: 45   FSKNEYSVSALENLPVNY-VLLTVTTNKPRDLRVKYWL-----SNDYGERFSISRQGDIS 98
            FS+  YSV   EN PV + VL  V T++        +       ND  + F ++ QG + 
Sbjct: 3440 FSRGNYSVIIQENKPVGFSVLQLVVTDEDSSHNGPPFFFTIVTGNDE-KAFEVNPQGVLL 3498

Query: 99   LMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIP 155
                +  + +D Y   V   D     +++   ++I V+  + + P       E+F+    
Sbjct: 3499 TSSAIKRKEKDHYLLQVKVADNGKPQLSSLTYIDIRVIEESIYPPAIL--PLEIFI--TT 3554

Query: 156  LADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSG 197
              +   G VIGK+ A D D  D +T SL    + +FS++ +G
Sbjct: 3555 SGEEYSGGVIGKIHATDQDVYDTLTYSLDPQMDNLFSVSSTG 3596


>gi|432099154|gb|ELK28527.1| Protocadherin-15 [Myotis davidii]
          Length = 1597

 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 61/195 (31%), Positives = 99/195 (50%), Gaps = 14/195 (7%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGER-FSISRQ-GDISLMQ 101
           +F +  YS+   E + +  VLL +         + Y + N   +R F++S   G ++L +
Sbjct: 406 RFPQMMYSLEVSEAMRIGAVLLNLQATDREGDPITYAIENGDPQRVFNLSETTGILTLGK 465

Query: 102 CLDYETEDSYRFTVYATDTL--MTTSATVNISVVNVNDWDPRFRYPQYELFLP-HIPLAD 158
            LD E+ D Y   V A D     T++ATVNI V +VND DP F     + +LP ++ + +
Sbjct: 466 ALDRESTDRYILIVTAHDGRPDGTSTATVNIVVSDVNDNDPVF-----DPYLPRNLSVVE 520

Query: 159 LTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDSGHI-SIVDLSALNTSTIQLV 215
               + +G+V A D D G   +V  SL G +  +F I  +G I + V L+       +L+
Sbjct: 521 EEANAFVGQVRATDPDAGINGQVYYSL-GNFNHLFRITSNGSIYTTVKLNREVRDYYELL 579

Query: 216 VVATDTGNPPRQASV 230
           VVATD    PR +++
Sbjct: 580 VVATDGAVHPRHSTL 594



 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 66/245 (26%), Positives = 109/245 (44%), Gaps = 35/245 (14%)

Query: 6   DFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVN---- 61
           DF Q   LV++A Q +     A A+L +     + +   F+   Y    LE+ PV     
Sbjct: 147 DFHQKFDLVIKAEQDNGHPLPAFASLHIEILDENNQSPYFTMPSYQGYILESAPVGSTIS 206

Query: 62  ----------YVLLTVTTNKPRDLRVKYWLSNDYGERFSISRQG---DISLMQCLDYETE 108
                      V+L       +D  +  +L NDY   F+I+  G    ++L+Q +D E +
Sbjct: 207 DSVNLTTPLRIVVLDKDIEDTKDPELHLFL-NDYTSVFTITPTGITRFLTLLQPVDREEQ 265

Query: 109 DSYRFTVYATDTLMTTS-ATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGK 167
           D+Y F++ A D +  +    VNI V++ ND  P F    Y +++      D++PG  + +
Sbjct: 266 DTYIFSMTAFDGVQESQPVVVNIRVMDANDNTPTFPEISYNVYV----YTDMSPGDSVIQ 321

Query: 168 VEAADGDKGDRVTLSLRGPYEKM------FSIN-DSGHISIV-DLSALNTSTIQLVVVAT 219
           + A D D+G    +S    YE +      F IN ++G I+I   +  +   T  L V A 
Sbjct: 322 LTAVDADEGSNGEIS----YEILIGDQGDFIINKETGLITIAPGVELIVGRTYALTVQAA 377

Query: 220 DTGNP 224
           D   P
Sbjct: 378 DNAPP 382



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 65/200 (32%), Positives = 95/200 (47%), Gaps = 24/200 (12%)

Query: 45  FSKNEYSVSALENLPVNYVLLTV-TTNKPRDLRVKYWL-SNDYGERFSISR-QGDISLMQ 101
           F+ + Y+V   ENLP   + L V  T+      V Y + S +    F++    G++SL++
Sbjct: 610 FTNSTYTVVVEENLPAGTIFLQVEATDVDLGANVSYRIRSPEVKHLFAMHPFTGELSLLR 669

Query: 102 CLDYET----EDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHI 154
            LDYE+    E S  F V A D   T+    ATV + V ++ND+ P F    Y+     I
Sbjct: 670 SLDYESFPDQEASITFLVEAFDIYGTMPPGIATVTVIVKDMNDYPPVFSKRIYK----GI 725

Query: 155 PLADLTPGSVIGKVEAADGDK----GDRVTLSLRG---PY-EKMFSIN-DSGH-ISIVDL 204
              D   G+ I  V A D D       RV   + G   PY   +F +  DSG  I+ V+L
Sbjct: 726 VAPDAAKGTPITSVYAEDADPPGLPASRVRYRVDGVQSPYPASIFDVEEDSGTVITRVNL 785

Query: 205 SALNTSTIQLVVVATDTGNP 224
           +   T+  +LVV+A D G P
Sbjct: 786 NEEPTTIFKLVVIAFDDGEP 805



 Score = 42.7 bits (99), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 38/132 (28%), Positives = 66/132 (50%), Gaps = 10/132 (7%)

Query: 76  RVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDTLMT---TSATVNISV 132
           +V Y L N +   F I+  G I     L+ E  D Y   V ATD  +    ++ T+ I V
Sbjct: 542 QVYYSLGN-FNHLFRITSNGSIYTTVKLNREVRDYYELLVVATDGAVHPRHSTLTLAIKV 600

Query: 133 VNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEK-MF 191
           ++++D  P F    Y + +      +L  G++  +VEA D D G  V+  +R P  K +F
Sbjct: 601 LDIDDNSPVFTNSTYTVVVEE----NLPAGTIFLQVEATDVDLGANVSYRIRSPEVKHLF 656

Query: 192 SIND-SGHISIV 202
           +++  +G +S++
Sbjct: 657 AMHPFTGELSLL 668


>gi|432847518|ref|XP_004066062.1| PREDICTED: protocadherin Fat 1-like [Oryzias latipes]
          Length = 4558

 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 71/232 (30%), Positives = 108/232 (46%), Gaps = 19/232 (8%)

Query: 13   LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTV---TT 69
            L  +AI   +    +L T+ VS    +     F   EY+ +  E++ V   LL V   + 
Sbjct: 3127 LTAQAIDRGSPRLSSLCTVTVSILDINDNPPVFEHREYTATVPEDVAVGAQLLRVQAASR 3186

Query: 70   NKPRDLRVKYWL--SNDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDTL---MT 123
            +K  +  + Y +   N++G  FS+ +R GDI +++ LDYET   Y  T+ ATD     ++
Sbjct: 3187 DKEANAEISYSIISGNEHG-MFSVDARSGDIFVIEPLDYETSHEYYITIEATDGGSPPLS 3245

Query: 124  TSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAA--DGDKGDRVTL 181
              ATVNI++ +VND  P F    Y   +      D+  G  +  V A   DG   D V  
Sbjct: 3246 DMATVNINLTDVNDNRPVFSQDVYAAVISE----DVELGKTVLAVMAEDFDGPSYDHVQY 3301

Query: 182  SL-RGPYEKMFSIND-SGHISIV-DLSALNTSTIQLVVVATDTGNPPRQASV 230
            S+  G     F+I+   G + +   L    TS   L VVA+D G PP  +S 
Sbjct: 3302 SIVDGNQGSPFTIDPLRGELKVARQLDRERTSGYTLTVVASDNGVPPLSSSA 3353



 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 55/216 (25%), Positives = 100/216 (46%), Gaps = 18/216 (8%)

Query: 29   ATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDL---RVKYWLSNDY 85
            A ++V+  G +     FS+ +  V  +EN PV  ++       P +    ++ Y + ND+
Sbjct: 2404 ALVMVTVVGANFHNPTFSQTDSLVELVENSPVGTLVAQAQAIDPDEGIYGQITYEIVNDF 2463

Query: 86   G-ERFSISRQGDISLMQCLDYET--EDSYRFTVYATDTLMTTS-ATVNISVVNVNDWDPR 141
              ++FSI+ +G+I  ++ LD E   E     ++ A D         +N+ V + ND  P+
Sbjct: 2464 ARDKFSINDKGEILTLESLDRENTVEKIIPISLMAKDGGGKVGFCIINVIVTDANDNAPK 2523

Query: 142  FRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS--LRGPYEKM---FSINDS 196
            FR  +Y+  +P    +D+  G+ + K+ A+D D+G    +   L    E +   F I+ +
Sbjct: 2524 FRAAEYKSTIP----SDVPRGTSLLKIAASDMDEGSNADIEYFLEADAENVRENFEIHKT 2579

Query: 197  GHISIV--DLSALNTSTIQLVVVATDTGNPPRQASV 230
              + +    L  L        V A DTGNP + + V
Sbjct: 2580 SGVIVTKESLIGLENELYAFFVRAKDTGNPSKDSVV 2615



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 46/141 (32%), Positives = 73/141 (51%), Gaps = 16/141 (11%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLS-NDYGERFSIS-RQGDISLMQC 102
            F +  YS+   EN+ ++  +L V  N     R+ Y +S  D  ++FSI    G I ++Q 
Sbjct: 2110 FERPFYSIEIPENIQLHSPVLHVQANDSEGPRIVYTISEGDPFKQFSIDFNTGVIHVIQP 2169

Query: 103  LDYETEDSYRFTVYATDTLMTTSATVNISVV--NVNDWDPRFRYPQYELFLPHIPLADLT 160
            LD+ET  +Y+  V ATD+L    + V + V+  ++ND  P        +FL     A+++
Sbjct: 2170 LDFETHPAYKLNVRATDSLTGAHSDVFVDVILEDINDNTP--------VFLSRSYYANIS 2221

Query: 161  PGSVIG----KVEAADGDKGD 177
              SVIG    +VEA D D G+
Sbjct: 2222 EASVIGTSVLQVEAKDSDTGN 2242



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 55/204 (26%), Positives = 95/204 (46%), Gaps = 23/204 (11%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTTNKPR---DLRVKYWLSNDYGERFSISR-QGDISL 99
            +F    Y +   E+LP+  V++ +  + P      +V+Y L+++   +F + +  G + +
Sbjct: 924  KFVPPNYRIKVREDLPIGTVIMWLEAHDPDIGPSSQVRYSLTDNGDGKFEVDKLSGALRI 983

Query: 100  MQCLDYETEDSYRFTVYATDT----LMTTSATVNISVVNVND--WDPRFRYPQYELFLPH 153
            +Q LDYET+  Y  T  A D      ++++  + + VV+VN+  + P+FR      F+  
Sbjct: 984  VQNLDYETKQVYNLTAKAKDKGKPISLSSTCFIEVDVVDVNENLYRPQFRSFVERGFIKE 1043

Query: 154  IPLADLTPGSVIGKVEAADGDKG--DRVTLSLR-GPYEKMFSINDSGHI----SIVDLSA 206
                D   G+ + KV A D D G    V  S+R G    +F+I +   +     ++D  A
Sbjct: 1044 ----DALVGTSVMKVSAEDEDTGRDGEVRYSIRDGSGLGIFTIEEETGVIRTQELLDHEA 1099

Query: 207  LNTSTIQLVVVATDTGNPPRQASV 230
              T    L V A D G  P  A V
Sbjct: 1100 --TPHYWLTVYAMDRGVVPLSAFV 1121



 Score = 46.6 bits (109), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 48/152 (31%), Positives = 66/152 (43%), Gaps = 27/152 (17%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKP-----------RDLRVKYWLSNDYGER-FSI- 91
            F + E+     E+ PVN V+LT   N P           ++ R+ Y +   Y    F+I 
Sbjct: 1693 FIQREFKGVISESSPVNSVVLT-HENTPLVIHASDADCDQNARLIYQIVEPYAHNYFAID 1751

Query: 92   SRQGDISLMQCLDYETEDSYRFTVYATDTLM-----TTSATVNISVVNVNDWDPRFRYPQ 146
            S  G I +   LDYE    + FTV   D  M      T+A V I+V++VND  P F    
Sbjct: 1752 SSTGAIRITTTLDYEERSVFHFTVQVHDLGMPRLFAETAANVTINVIDVNDCSPSFTQEV 1811

Query: 147  YE--LFLPHIPLADLTPGSVIGKVEAADGDKG 176
            YE  + LP         G  + +V A D D G
Sbjct: 1812 YEAVIVLP------TYKGVEVIQVNATDSDSG 1837



 Score = 46.2 bits (108), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 47/214 (21%), Positives = 96/214 (44%), Gaps = 34/214 (15%)

Query: 15   VRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNY------------ 62
            ++ +  +  D+Y +A L   + G +++ +  +  E +V+ + + P  +            
Sbjct: 2801 LKELDREKMDKYTIAVLATDQ-GDTIQHISGTTVEVTVADVNDNPPRFTAEIYKGTVSED 2859

Query: 63   --------VLLTVTTNKPRDL--RVKYWLSN-DYGERFSISR---QGDISLMQCLDYETE 108
                     +L+ T +   D   +V Y+++  D   +F+I     +  +S+ + LD E  
Sbjct: 2860 DPPPSGVIAILSTTDDDSEDFNKQVNYFITGGDPLGQFAIEHVQNEWKVSVRKPLDREVM 2919

Query: 109  DSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKV 168
            D+Y   + A+D + T  A V + V++ ND DP      Y   +P     D   G +I +V
Sbjct: 2920 DNYLLNITASDGIFTAKAVVEVKVLDANDNDPVCEQLLYSESVPE----DSPAGRLILQV 2975

Query: 169  EAADGD--KGDRVTLSLRGPYEKMFSIN-DSGHI 199
             A D D     +++  L+G   ++F I+ D+G +
Sbjct: 2976 SATDADIRSNAQISFELQGVGAELFIIDSDTGEL 3009



 Score = 45.4 bits (106), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 53/185 (28%), Positives = 84/185 (45%), Gaps = 15/185 (8%)

Query: 50   YSVSALENLPVNYVLLTVTTNKPRDLR----VKYWLSNDYGERFSI-SRQGDISLMQCLD 104
            YS S  E+ P   ++L V+     D+R    + + L     E F I S  G++   + LD
Sbjct: 2958 YSESVPEDSPAGRLILQVSATDA-DIRSNAQISFELQGVGAELFIIDSDTGELKTSRPLD 3016

Query: 105  YETEDSYRFTVYATDTL-MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGS 163
             E ++ +RF V A D       A ++I+V +VND  P F    Y + +      +   G+
Sbjct: 3017 REKQEEHRFKVRAVDGGGRYCEADIHITVEDVNDNPPLFALDPYTITV----FENTETGT 3072

Query: 164  VIGKVEAADGDKG--DRVTLSLRGPYEKMFSIND-SGHISIVD-LSALNTSTIQLVVVAT 219
             + K+ A D D G    +  SL    +  FS+++ SG IS+   L     S  +L   A 
Sbjct: 3073 FVAKLLANDADAGLNSDILYSLINSADGSFSVDENSGVISLERPLDREVQSVYELTAQAI 3132

Query: 220  DTGNP 224
            D G+P
Sbjct: 3133 DRGSP 3137



 Score = 43.5 bits (101), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 51/195 (26%), Positives = 90/195 (46%), Gaps = 21/195 (10%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWL-SNDYGERFSIS-RQGDISL 99
            FS++ Y+    E++ +   +L V     + P    V+Y +   + G  F+I   +G++ +
Sbjct: 3264 FSQDVYAAVISEDVELGKTVLAVMAEDFDGPSYDHVQYSIVDGNQGSPFTIDPLRGELKV 3323

Query: 100  MQCLDYETEDSYRFTVYATDTL---MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
             + LD E    Y  TV A+D     +++SAT+NI + +VND  P F    Y L +     
Sbjct: 3324 ARQLDRERTSGYTLTVVASDNGVPPLSSSATINIDISDVNDNPPLFSQANYSLIIQE--- 3380

Query: 157  ADLTPGSVIGKVEAADGD---KGDRVTLSL-RGPYEKMFSINDSGHISIVDLSALNTSTI 212
             +   G+ + ++  +D D    G   T ++  G     F IN  G  ++V + ALN  + 
Sbjct: 3381 -NRPKGTSVLQLTVSDQDASHNGPPFTFTIVDGNEGSAFLINQQG--ALVTVGALNRKSK 3437

Query: 213  Q---LVVVATDTGNP 224
                L    +D+G P
Sbjct: 3438 DNYLLHAQVSDSGKP 3452



 Score = 42.4 bits (98), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 78/180 (43%), Gaps = 17/180 (9%)

Query: 11   ITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTT- 69
            +TL+ +A +++N D  A   + +     +  +  F  N Y    +ENL     ++ V   
Sbjct: 2704 LTLLAQA-RFENDDILASVNVNIQVKDVNDNKPIFEANPYKAVTVENLASGTQVVQVRAT 2762

Query: 70   --NKPRDLRVKYWL-----SNDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDTL 121
              +   +  V Y L     S +  E FS+ S  G ++ ++ LD E  D Y   V ATD  
Sbjct: 2763 DLDSGTNSHVIYSLDPKQNSQEIFELFSVNSETGWVTTLKELDREKMDKYTIAVLATDQG 2822

Query: 122  MT----TSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGD 177
             T    +  TV ++V +VND  PRF     E++   +   D  P  VI  +   D D  D
Sbjct: 2823 DTIQHISGTTVEVTVADVNDNPPRF---TAEIYKGTVSEDDPPPSGVIAILSTTDDDSED 2879



 Score = 40.4 bits (93), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 62/127 (48%), Gaps = 16/127 (12%)

Query: 79   YWLSNDYGER---FSISR-QGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNIS 131
            Y L ++ G+    F I R +G ISL Q LD+E    ++      D     +++  TV I 
Sbjct: 2248 YQLVDEKGKSSNYFIIDRDKGIISLAQVLDHEDIQQHKLRARVVDGGVPALSSEVTVTID 2307

Query: 132  VVNVNDWDPRFRYPQYELFLPHIPLADLTP-GSVIGKVEAADGDKGDRVTLS---LRGPY 187
            V ++ND  P F       F+ +  +++L P G  + +V+A+D D  D   L    + G  
Sbjct: 2308 VTDLNDNAPMFTE-----FIYNTTVSELAPRGHFVIQVQASDPDSSDTKKLEFAIISGND 2362

Query: 188  EKMFSIN 194
            E+ F+IN
Sbjct: 2363 EQNFAIN 2369



 Score = 40.0 bits (92), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 52/192 (27%), Positives = 86/192 (44%), Gaps = 19/192 (9%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGERFSISR-QGDISL 99
           +F +  Y V+  EN+P+   ++TV     ++  +  V Y ++N   + F I    G I+ 
Sbjct: 460 EFQQTSYKVTVDENVPIGTSVITVKATDLDRGENGYVTYSITNLSPQPFVIDYFSGVITT 519

Query: 100 MQCLDYETEDS-YRFTVYATDT----LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHI 154
            + LDYE     Y   V A+D          ++V I++ N+ND  P F     E+ +P  
Sbjct: 520 SEVLDYELMPRIYNLKVRASDWGSPFRREVESSVTITLNNLNDNRPLFENVDCEVTVPR- 578

Query: 155 PLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYE-KMFSIN-DSGHIS----IVDLSALN 208
              D   G  I    A D D+   V  +++   +  +F +N +SG +S    + D  A  
Sbjct: 579 ---DHGVGEQITTASAIDADELQLVRYNIKAGNDLDLFELNPNSGLLSLKRTLSDGEAAR 635

Query: 209 TSTIQLVVVATD 220
            S   L +VATD
Sbjct: 636 VSFHSLQIVATD 647



 Score = 39.3 bits (90), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 52/194 (26%), Positives = 89/194 (45%), Gaps = 18/194 (9%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTV-TTNKPRDLR--VKYWLSNDYGERFSISR-QGDISL 99
            QF ++ Y+V   E+ P+   ++ V  T+K +     +KY +     + F I+   G +++
Sbjct: 819  QFLQDSYTVEVSESTPIQTEIIQVDATDKDQGNNGIIKYSILGGT-DHFEINELTGVVTV 877

Query: 100  MQCLDYETEDSYRFTVYATDTLMT-----TSATVNISVVNVNDWDPRFRYPQYELFLPHI 154
             + LD E    Y   + A D  ++     ++  + I++ +VND  P+F  P Y + +   
Sbjct: 878  RRPLDRERFPFYTLKIAARDQAVSEPQLVSTVPLKITLEDVNDNPPKFVPPNYRIKVRE- 936

Query: 155  PLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIND-SGHISIV-DLSALNTS 210
               DL  G+VI  +EA D D G   +V  SL    +  F ++  SG + IV +L      
Sbjct: 937  ---DLPIGTVIMWLEAHDPDIGPSSQVRYSLTDNGDGKFEVDKLSGALRIVQNLDYETKQ 993

Query: 211  TIQLVVVATDTGNP 224
               L   A D G P
Sbjct: 994  VYNLTAKAKDKGKP 1007


>gi|410975317|ref|XP_003994079.1| PREDICTED: cadherin-23-like isoform 2 [Felis catus]
          Length = 1079

 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 59/195 (30%), Positives = 90/195 (46%), Gaps = 20/195 (10%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWLSNDYGERFSIS-RQGDISLM 100
           F +  Y  +  E++PV  V+LTVT           ++Y L +  G +F+I+   GDI ++
Sbjct: 162 FDQPSYQEAVFEDVPVGTVILTVTATDADSGNFALLEYSLGDGEG-KFAINPATGDIYVL 220

Query: 101 QCLDYETEDSYRFTVYATD-------TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
             LD E +D Y  T  A D            S  V I V++VND  P+F  PQ+   +  
Sbjct: 221 SSLDREKKDHYILTALAKDNPGDIASNRRENSVQVVIQVLDVNDCRPQFSKPQFSTSV-- 278

Query: 154 IPLADLTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSIN-DSGHISIVDLSALNTS 210
               +   G+ +  + A D D+G    +  SL GP  + F ++ DSG ++       +  
Sbjct: 279 --YENEPAGTSVITMMATDQDEGSNGELAYSLEGPGVEAFHVDLDSGLVT-TKRPLQSYE 335

Query: 211 TIQLVVVATDTGNPP 225
              L VVATD G PP
Sbjct: 336 RFNLTVVATDGGQPP 350



 Score = 40.4 bits (93), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 34/107 (31%), Positives = 49/107 (45%), Gaps = 8/107 (7%)

Query: 92  SRQGDISLMQCLDYETEDSYRFTVYATDTLMTTSAT---VNISVVNVNDWDPRFRYPQYE 148
           S  G +   + +DYE      FTV A+D      A    V + +V++ND +P F  P Y+
Sbjct: 109 SSAGKVIANRTVDYEEVHWLNFTVRASDNGSPPRAAEIPVYLEIVDINDNNPIFDQPSYQ 168

Query: 149 LFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSIN 194
             +      D+  G+VI  V A D D G+   L    G  E  F+IN
Sbjct: 169 EAV----FEDVPVGTVILTVTATDADSGNFALLEYSLGDGEGKFAIN 211



 Score = 38.1 bits (87), Expect = 7.7,   Method: Compositional matrix adjust.
 Identities = 30/122 (24%), Positives = 54/122 (44%), Gaps = 17/122 (13%)

Query: 125 SATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR 184
           +A + +++++VND  P+F+      +   I L   TPG+ +  V A D DKG    ++  
Sbjct: 36  NAKLTVNILDVNDNTPQFKPFGITYYTERI-LEGATPGTTLIAVAAVDPDKGLNGLITY- 93

Query: 185 GPYEKMFSINDSGHISIVDLSA-----------LNTSTIQLVVVATDTGNPPRQASVPAI 233
                +  +   G++ + D SA                +   V A+D G+PPR A +P  
Sbjct: 94  ----TLLDLTPPGYVQLEDSSAGKVIANRTVDYEEVHWLNFTVRASDNGSPPRAAEIPVY 149

Query: 234 MH 235
           + 
Sbjct: 150 LE 151


>gi|395508999|ref|XP_003758794.1| PREDICTED: cadherin-23-like, partial [Sarcophilus harrisii]
          Length = 3356

 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 58/195 (29%), Positives = 88/195 (45%), Gaps = 20/195 (10%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTT----NKPRDLRVKYWLSNDYGERFSIS-RQGDISL 99
            F +  Y  S  E+ PV  ++LTVT     + P  L ++Y L +  G +F I+   GDI +
Sbjct: 2403 FDQPSYQESVFEDAPVGTIILTVTATDADSGPFAL-IEYSLGDGEG-KFGINPTTGDIYV 2460

Query: 100  MQCLDYETEDSYRFTVYATDT-------LMTTSATVNISVVNVNDWDPRFRYPQYELFLP 152
            +  LD E +  Y  T  A D            S  V I V++VND  P+F  PQ+   + 
Sbjct: 2461 LSSLDREMKAHYILTALAKDNPGDVPSNRRENSVQVVIQVLDVNDCRPQFSKPQFSTSV- 2519

Query: 153  HIPLADLTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSINDSGHISIVDLSALNTS 210
                 +   G+ +  + A D D+G+   +T S+ GP  + F I+    +        +  
Sbjct: 2520 ---YENEPAGTSVITMMATDQDEGENGELTYSIEGPGVEAFQIDKDSGLVATGRPLQSYE 2576

Query: 211  TIQLVVVATDTGNPP 225
               L VVATD G PP
Sbjct: 2577 RFNLTVVATDGGQPP 2591



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 69/236 (29%), Positives = 112/236 (47%), Gaps = 30/236 (12%)

Query: 50   YSVSALENLPVNY--VLLTVTTNK-PRDLRVKYWLSN-DYGERFSIS-RQGDISLMQCLD 104
            Y+VS LE++P ++  V L  T N    +  + Y+++  +   +F I  R G +  +  LD
Sbjct: 1001 YNVSLLEDIPRDFRVVWLNCTDNDVGLNAELSYFITGGNIDGKFRIGYRDGVVRTVVNLD 1060

Query: 105  YETEDSYRFTVYATDT-----LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADL 159
             ET  +Y   V A D        T +ATV I+V++VND  P F    YE  +P     D+
Sbjct: 1061 RETTAAYTLIVEAIDNGPVGKRRTGTATVYITVLDVNDNRPIFLQSSYEASVPE----DI 1116

Query: 160  TPGSVIGKVEAADGDKGD--RVTLS-LRGPYEKMFSINDSGHISIVDLSALN---TSTIQ 213
              GS I ++ A D D+GD  RV    L G +   F I+ S  + +     L+    S+  
Sbjct: 1117 PEGSSIVQLMATDADEGDNGRVWYRILHGNHGNNFRIHVSSGLLMRGPRPLDRERNSSHV 1176

Query: 214  LVVVATDTGNPPRQASVPAIMHFPE------AIVQQASSKLN----SGTSSTVLII 259
            LVV A +    P ++SV  I++  +         QQ  S+L     +G  ++V+++
Sbjct: 1177 LVVEAYNYDLGPMRSSVRVIVYVEDVNDEVPVFTQQQYSRLGLRETAGIGTSVIVV 1232



 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 65/219 (29%), Positives = 100/219 (45%), Gaps = 42/219 (19%)

Query: 45  FSKNEYSVSALENLPVNY-VLLTVTTNKPRDLRVKYWLSNDYGE-----------RFSI- 91
           FSK  YSV+ +EN+     VL    T+  R        S +YG+           +F I 
Sbjct: 672 FSKPSYSVTVVENIMAGATVLFLNATDLDR--------SREYGQESIIYSLEGSSQFRIN 723

Query: 92  SRQGDISLMQCLDYETEDSYRFTVYATD-----TLMTTSATVNISVVNVNDWDPRFRYPQ 146
           +R G+I+    LD ET+  Y   V A D        T  ATVNI+++++ND  P ++   
Sbjct: 724 ARSGEITTTSLLDRETKSEYILIVRAVDGGVGHNQKTGIATVNITLLDINDNHPTWKDAP 783

Query: 147 YELFLPHIPLADLT-PGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSIND-SGHIS--- 200
           Y     +I L ++T P S +  V A D D  +  TL     P  K +SIN  +G I    
Sbjct: 784 Y-----YINLVEMTPPDSDVTTVVAVDPDLAENGTLVYSIYPPNKFYSINSTTGKIRTTN 838

Query: 201 -IVDLSALNTSTIQL----VVVATDTGNPPRQASVPAIM 234
            ++D    +    +L    ++  TD G PP +A+  A++
Sbjct: 839 VMLDRENPDPEEAELMRKIIISVTDCGRPPLRATSSAMV 877



 Score = 47.4 bits (111), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 44/141 (31%), Positives = 64/141 (45%), Gaps = 15/141 (10%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDY---GERFSI-SRQGDISLM 100
           F    YSV   EN PV   +  V    P DL     +   +    E F+I S +G ++++
Sbjct: 133 FHNQPYSVRIPENTPVGTPIFIVNATDP-DLGAGGSVLYSFQPPSEFFAIDSARGIVTVI 191

Query: 101 QCLDYETEDSYRFTVYATD----TLMTTSATVNISVVNVNDWDPRF-RYPQYELFLPHIP 155
           + LDYE   +Y+  V ATD      ++T A + I + +V D DP F   P       H P
Sbjct: 192 RELDYEVTQAYQLVVNATDQDKTKPLSTLANLAIIITDVQDMDPIFVNLPYSTNIYEHSP 251

Query: 156 LADLTPGSVIGKVEAADGDKG 176
                PG+ +  + A D DKG
Sbjct: 252 -----PGTTVRMITAVDQDKG 267



 Score = 46.2 bits (108), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 51/175 (29%), Positives = 82/175 (46%), Gaps = 25/175 (14%)

Query: 77  VKYWLSNDYGERFSISRQ-GDISLMQCLDYETEDSYRFTVYATDTL-MTTSATVNISVVN 134
           V Y+LS+D  +RFS+ +  G I+L+  LDYE    +  TV A D     T+  V ++V++
Sbjct: 496 VYYFLSDD-SDRFSLDKDTGLITLIAKLDYELIQRFTLTVIARDGGGEETTGRVRVNVLD 554

Query: 135 VNDWDPRFRYPQYELFL----PHIPLADLTPGSVIGKVEAADGDK--GDRVTLSL----- 183
           VND  P F+   Y   L    P +        + + ++ A D D    +++T S+     
Sbjct: 555 VNDNVPTFQKDAYVGALRENEPSV--------TQLVRLRATDEDSPPNNQITYSIVNASA 606

Query: 184 RGPYEKMFSINDSGHISI---VDLSALNTSTIQLVVVATDTGNPPRQASVPAIMH 235
            G Y  +        IS+   +D   +    I L V+A D GNPP  ++VP  + 
Sbjct: 607 FGSYFDISVYEGYAVISVNRPLDYEQIPNGMIYLTVMAKDAGNPPLNSTVPVTIE 661



 Score = 42.7 bits (99), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 59/203 (29%), Positives = 89/203 (43%), Gaps = 25/203 (12%)

Query: 43   LQFSKNEYSVSALENLP-----VNYVLLTVTTNKPRDLRVKYWLSNDYGERFSI-SRQGD 96
            +QFS   Y  + +ENLP     V     ++    P   R   + S      F I S  G 
Sbjct: 1312 VQFSNASYEAAIMENLPWGSEVVRVQAFSIDNINPIVYRFDPYTSPQARALFKIDSVTGV 1371

Query: 97   ISLMQCLDYETEDSYRFTVYATDTLMTTSATVN--ISVVNVNDWDPRFRYPQYELFLPHI 154
            I++   +D E  D Y  TV A D      +TV   I+V++ ND  P+F  P  +  +  I
Sbjct: 1372 ITVKGLVDREKGDFYTLTVVADDGGPKVDSTVKVYITVLDENDNSPQFD-PTSDSAV-SI 1429

Query: 155  PLADLTPGSVIGKVEAADGDKGDRVTLS-------LRGPYEKMFSINDS-GHISI---VD 203
            P  D   G  +  V A D D G    +S       + G +E + + NDS G + +   +D
Sbjct: 1430 P-EDCAVGRRVAVVTARDADIGSNGQVSFYLASGNIGGAFE-ILTTNDSIGEVFVARPLD 1487

Query: 204  LSALNTSTIQLVVVATDTGNPPR 226
               L+   ++  +VA D G+PPR
Sbjct: 1488 REELDHYILK--IVAIDGGSPPR 1508



 Score = 41.6 bits (96), Expect = 0.66,   Method: Compositional matrix adjust.
 Identities = 49/149 (32%), Positives = 67/149 (44%), Gaps = 13/149 (8%)

Query: 79  YWLSNDYGERFSI--SRQGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVN 136
           + +S +   RF    S  G + L Q LD ET+  +      +D     +  VNI V +VN
Sbjct: 68  FGVSGEEASRFFAVESDTGVVWLRQPLDRETKSEFTVEFSVSDHQGVITRKVNIQVGDVN 127

Query: 137 DWDPRFRYPQYELFLPHIPLADLTP-GSVIGKVEAADGD--KGDRVTLSLRGPYEKMFSI 193
           D  P F    Y + +P     + TP G+ I  V A D D   G  V  S + P E  F+I
Sbjct: 128 DNAPTFHNQPYSVRIP-----ENTPVGTPIFIVNATDPDLGAGGSVLYSFQPPSE-FFAI 181

Query: 194 NDSGHISIV--DLSALNTSTIQLVVVATD 220
           + +  I  V  +L    T   QLVV ATD
Sbjct: 182 DSARGIVTVIRELDYEVTQAYQLVVNATD 210



 Score = 40.8 bits (94), Expect = 0.99,   Method: Compositional matrix adjust.
 Identities = 57/238 (23%), Positives = 104/238 (43%), Gaps = 33/238 (13%)

Query: 27   ALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDL--RVKYWLSN- 83
            A+ T+++     S  E  F     +VS LE++    ++  VT    RDL  +++Y++ + 
Sbjct: 2159 AIVTVLIDDVNDSCPE--FLNPIQTVSVLESVDPGTIIANVTAID-RDLSPQLEYFIIDI 2215

Query: 84   -----------DYGERFSIS-RQGDISLMQCLDYETEDSYRFTVYATD--------TLMT 123
                       D  E F+++   G + +   L+ E   +Y  T+   D         +  
Sbjct: 2216 VAKDDTDRLVPDQEEAFAVNINTGSVMVKSPLNRELVATYEVTISVIDNASDLPENAVSV 2275

Query: 124  TSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTL 181
             +A + +++++VND  P+FR P    +     L   TPG+ +  V A D DKG   ++T 
Sbjct: 2276 PNAKLTVNILDVNDNTPQFR-PFGITYYTERVLEGATPGTTLIAVSAYDPDKGVNGQITY 2334

Query: 182  SLRGPYEKMF-SINDSGHISIVDLSALNTSTIQLV---VVATDTGNPPRQASVPAIMH 235
            +L       +  + DS    I+    ++   +  V   V A D G+PPR A +P  + 
Sbjct: 2335 TLLNLVPPGYVQLEDSSAGKIIANRTVDYEEVHWVNFTVQAADNGSPPRAAEIPVYLE 2392



 Score = 39.7 bits (91), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 36/123 (29%), Positives = 58/123 (47%), Gaps = 15/123 (12%)

Query: 44  QFSKNEYSVSALENLPVNYVL--LTVTTNKPRDLRV----KYWLSNDYGERF-----SIS 92
           +F+ +EYSV+  E   V + L       +K  +L +    + +L  +    F     SI 
Sbjct: 348 EFNSSEYSVAITELAQVGFALPLFIQVVDKDEELGLNSMFEVYLVGNNSHHFIVSPTSIQ 407

Query: 93  RQGDISL--MQCLDYETEDSYRFTVYATDTL--MTTSATVNISVVNVNDWDPRFRYPQYE 148
            + DI +   Q LDYET   Y F ++A +++      A V I+++N ND  P F  P Y 
Sbjct: 408 GKADIRMRVAQPLDYETVSRYDFDMFANESVPDHVGYAKVKITLINENDNRPIFSQPLYN 467

Query: 149 LFL 151
           + L
Sbjct: 468 VSL 470


>gi|218505789|ref|NP_001136242.1| protocadherin-15 isoform CD2-2 precursor [Homo sapiens]
          Length = 1539

 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 61/195 (31%), Positives = 100/195 (51%), Gaps = 14/195 (7%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGER-FSISRQ-GDISLMQ 101
           +F +  YS+   E + V  VLL +         + Y + N   +R F++S   G ++L +
Sbjct: 615 RFPQLMYSLEISEAMRVGAVLLNLQATDREGDSITYAIENGDPQRVFNLSETTGILTLGK 674

Query: 102 CLDYETEDSYRFTVYATDTL--MTTSATVNISVVNVNDWDPRFRYPQYELFLP-HIPLAD 158
            LD E+ D Y   + A+D     T++ATVNI V +VND  P F     + +LP ++ + +
Sbjct: 675 ALDRESTDRYILIITASDGRPDGTSTATVNIVVTDVNDNAPVF-----DPYLPRNLSVVE 729

Query: 159 LTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDSGHI-SIVDLSALNTSTIQLV 215
               + +G+V+A D D G   +V  SL G +  +F I  +G I + V L+       +LV
Sbjct: 730 EEANAFVGQVKATDPDAGINGQVHYSL-GNFNNLFRITSNGSIYTAVKLNREVRDYYELV 788

Query: 216 VVATDTGNPPRQASV 230
           VVATD    PR +++
Sbjct: 789 VVATDGAVHPRHSTL 803



 Score = 54.7 bits (130), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 62/241 (25%), Positives = 105/241 (43%), Gaps = 27/241 (11%)

Query: 6   DFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVN---- 61
           DF Q   LV++A Q +     A A L +     + +   F+   Y    LE+ PV     
Sbjct: 356 DFHQKFDLVIKAEQDNGHPLPAFAGLHIEILDENNQSPYFTMPSYQGYILESAPVGATIS 415

Query: 62  ----------YVLLTVTTNKPRDLRVKYWLSNDYGERFSISRQG---DISLMQCLDYETE 108
                      V L       +D  +  +L NDY   F++++ G    ++L+Q +D E +
Sbjct: 416 DSLNLTSPLRIVALDKDIEDTKDPELHLFL-NDYTSVFTVTQTGITRYLTLLQPVDREEQ 474

Query: 109 DSYRFTVYATDTLMTTS-ATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGK 167
            +Y F++ A D +  +    VNI V++ ND  P F    Y++++      D+ PG  + +
Sbjct: 475 QTYTFSITAFDGVQESEPVIVNIQVMDANDNTPTFPEISYDVYV----YTDMRPGDSVIQ 530

Query: 168 VEAADGDKGD--RVTLSLRGPYEKMFSIND-SGHISIV-DLSALNTSTIQLVVVATDTGN 223
           + A D D+G    +T  +    +  F IN  +G I+I   +  +   T  L V A D   
Sbjct: 531 LTAVDADEGSNGEITYEILVGAQGDFIINKTTGLITIAPGVEMIVGRTYALTVQAADNAP 590

Query: 224 P 224
           P
Sbjct: 591 P 591



 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 71/233 (30%), Positives = 103/233 (44%), Gaps = 26/233 (11%)

Query: 13   LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKP 72
            LVV A       R++  TL +           F+ + Y+V   ENLP    +L +   K 
Sbjct: 787  LVVVATDGAVHPRHSTLTLAIKVLDIDDNSPVFTNSTYTVLVEENLPAGTTILQIEA-KD 845

Query: 73   RDL--RVKYWLSNDYGERFSISR--QGDISLMQCLDYET----EDSYRFTVYATD---TL 121
             DL   V Y + +   + F       G++SL++ LDYE     E S  F V A D   T+
Sbjct: 846  VDLGANVSYRIRSPEVKHFFALHPFTGELSLLRSLDYEAFPDQEASITFLVEAFDIYGTM 905

Query: 122  MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDK----GD 177
                ATV + V ++ND+ P F    Y+  +      D   G+ I  V A D D       
Sbjct: 906  PPGIATVTVIVKDMNDYPPVFSKRIYKGMV----APDAVKGTPITTVYAEDADPPGLPAS 961

Query: 178  RVTL---SLRGPY-EKMFSIN-DSGH-ISIVDLSALNTSTIQLVVVATDTGNP 224
            RV      ++ PY   +F +  DSG  I+ V+L+   T+  +LVVVA D G P
Sbjct: 962  RVRYRVDDVQFPYPASIFEVEEDSGRVITRVNLNEEPTTIFKLVVVAFDDGEP 1014



 Score = 46.2 bits (108), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 56/119 (47%), Gaps = 8/119 (6%)

Query: 76  RVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDTLMT---TSATVNISV 132
           +V Y L N +   F I+  G I     L+ E  D Y   V ATD  +    ++ T+ I V
Sbjct: 751 QVHYSLGN-FNNLFRITSNGSIYTAVKLNREVRDYYELVVVATDGAVHPRHSTLTLAIKV 809

Query: 133 VNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMF 191
           ++++D  P F    Y + +      +L  G+ I ++EA D D G  V+  +R P  K F
Sbjct: 810 LDIDDNSPVFTNSTYTVLVEE----NLPAGTTILQIEAKDVDLGANVSYRIRSPEVKHF 864


>gi|444721941|gb|ELW62648.1| Protocadherin Fat 4 [Tupaia chinensis]
          Length = 2618

 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 64/192 (33%), Positives = 92/192 (47%), Gaps = 24/192 (12%)

Query: 50  YSVSALENLPVNYVLLTVTTNKPRDLRV----KYWLSNDYGERFSIS-RQGDISLMQCLD 104
           +S    EN P+ Y +  VTT+   D+ V    +Y +  D    F+I+   GDI + + LD
Sbjct: 450 FSAHVPENFPLGYTVTRVTTSD-EDIGVNAISRYSIM-DTSLPFTINPSTGDIIISRPLD 507

Query: 105 YETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSV 164
            E  D YR  V A D+  T S  V I V +VND  PRF  P Y L  P   L ++  GS 
Sbjct: 508 REDTDRYRIRVSAHDSGWTVSTDVTIFVTDVNDNAPRFSRPSYYLDCPE--LTEI--GSK 563

Query: 165 IGKVEAADGDKGD--RVTLSLRGPYEKMFSIN-DSGHI---------SIVDLSALNTSTI 212
           + +V A D D+G   +V   ++   E  F IN  +G I         ++   S +N +  
Sbjct: 564 VTQVSATDPDEGSNGQVFYFIKSQSE-YFRINATTGEIFNKQVLRYQNVSGFSNVNINRH 622

Query: 213 QLVVVATDTGNP 224
             VV ++D GNP
Sbjct: 623 SFVVTSSDRGNP 634



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 48/149 (32%), Positives = 70/149 (46%), Gaps = 12/149 (8%)

Query: 95  GDISLMQCLDYETEDSYRFTVYATDT----LMTTSATVNISVVNVNDWDPRFRYPQYELF 150
           G I     LD ET+D+Y   V ++D      +++S +V I+V +VND  PRF   Q+  +
Sbjct: 88  GQIITSALLDRETKDNYTLVVVSSDAGSPEPLSSSTSVLITVTDVNDNPPRF---QHHPY 144

Query: 151 LPHIPLADLTPGSVIGKVEAADGDKGDRVTL--SLRGPYEKMFSINDSGHISIVDLSALN 208
           + HIP   L  GS +  V   D D G    L  SL G + + F I D    +I+    LN
Sbjct: 145 VTHIPSPTLA-GSFVFAVTVTDADIGPNSELHYSLSGRHSEKFHI-DPLRGAIMAAEPLN 202

Query: 209 -TSTIQLVVVATDTGNPPRQASVPAIMHF 236
             S +   V   D G+ P+  S    + F
Sbjct: 203 GASEVTFSVHVKDGGSFPKTDSTTVTVRF 231



 Score = 47.4 bits (111), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 52/192 (27%), Positives = 88/192 (45%), Gaps = 18/192 (9%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGERFSIS-RQGDISLM 100
            F  +EY  + LEN P    ++ +     +   +  + Y + +   + F I    G I+  
Sbjct: 867  FLPDEYFPTVLENAPSGTTVINLNATDADSGTNAVIAYTVQSSDSDLFVIDPNTGVITTQ 926

Query: 101  QCLDYETEDSYRFTVYA---TDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLA 157
              LD+ET+ SY  TV A    D    + AT+NI +   N++ PRF    Y     +  ++
Sbjct: 927  GFLDFETKQSYHLTVKAFNVPDEERCSFATINIQLKGTNEYVPRFVSKLY-----YFEIS 981

Query: 158  DLTP-GSVIGKVEAAD---GDKGDRVTLSLRGPYEKMFSIN-DSGHISIVD-LSALNTST 211
            +  P G+V+G+V A+D   G  G+   L      +K F IN  +G I +   L       
Sbjct: 982  EAAPKGTVVGEVFASDRDLGTDGEVHYLIFGSSRKKGFQINKKTGQIYVSGLLDREKEER 1041

Query: 212  IQLVVVATDTGN 223
            + L V+A ++G+
Sbjct: 1042 VSLKVLAKNSGS 1053



 Score = 42.0 bits (97), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 46/186 (24%), Positives = 86/186 (46%), Gaps = 14/186 (7%)

Query: 6   DFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLL 65
           D  Q   ++V A    N    + AT+ ++    +    +FS++  S +  E+  +  ++ 
Sbjct: 723 DLNQNFLIIVTAKDKGNPPLSSQATVQITVTEENYHTPEFSQSHMSATIPESHSIGAIVR 782

Query: 66  TVTTNKPRDLR----VKYWLSNDYGER-FSI-SRQGDISLMQCLDYETEDSYRFTVYATD 119
           TV+  + RD      ++Y +S+   +  F+I S  G ++L + LDYE    +   + ATD
Sbjct: 783 TVSA-RDRDAAMNGLIRYSISSGNEDGIFAINSSTGVLTLAKALDYELCQKHEMIISATD 841

Query: 120 ---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG 176
                 T   +V I+V++VND  P F   +Y    P + L +   G+ +  + A D D G
Sbjct: 842 GGWVARTGYCSVTINVIDVNDNSPVFLPDEY---FPTV-LENAPSGTTVINLNATDADSG 897

Query: 177 DRVTLS 182
               ++
Sbjct: 898 TNAVIA 903



 Score = 39.3 bits (90), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 61/240 (25%), Positives = 102/240 (42%), Gaps = 25/240 (10%)

Query: 9    QPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVT 68
            Q   L V+A    +++R + AT+ +   GT+    +F    Y     E  P   V+  V 
Sbjct: 935  QSYHLTVKAFNVPDEERCSFATINIQLKGTNEYVPRFVSKLYYFEISEAAPKGTVVGEVF 994

Query: 69   TNKPRDL----RVKYWLSNDYGER-FSISRQ-GDISLMQCLDYETEDSYRFTVYATDTLM 122
             +  RDL     V Y +     ++ F I+++ G I +   LD E E+     V A ++  
Sbjct: 995  ASD-RDLGTDGEVHYLIFGSSRKKGFQINKKTGQIYVSGLLDREKEERVSLKVLAKNSGS 1053

Query: 123  TTSA-----TVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTP-GSVIGKVEAADGD-- 174
               A     TVN++V++ ND       P + L +  + +++  P G+ +  V A D D  
Sbjct: 1054 IRGADIDEVTVNVTVLDAND------PPVFSLSIYSVQISEGVPVGTHVTFVSAFDSDSV 1107

Query: 175  -KGDRVTLSL-RGPYEKMFSIN-DSGHISI-VDLSALNTSTIQLVVVATDTGNPPRQASV 230
                R +  +  G     FSIN  +G I++  +L         L V+A D+G P    S 
Sbjct: 1108 PSWSRFSYFIGSGNENGAFSINPQTGQITVTAELDRETLPIYNLTVLAVDSGTPSATGSA 1167



 Score = 38.9 bits (89), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 39/138 (28%), Positives = 65/138 (47%), Gaps = 14/138 (10%)

Query: 89   FSISRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYP 145
            FS++  G +S  + +D E    +  +V   D+    M+++ TV+I V++ ND   + R  
Sbjct: 1231 FSLNTAGVLSTTREIDREQIADFYLSVVTRDSGVPQMSSTGTVHIRVIDQNDNPSQSR-- 1288

Query: 146  QYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSGHISIVDLS 205
              E+F+ +    +L PG ++G V+  D D  D    SL      +FSI         DL 
Sbjct: 1289 TVEIFVNY--YGNLFPGGILGSVKPQDPDVLDSFHCSLTSGVTSLFSI----PAGTCDLQ 1342

Query: 206  ALNTS---TIQLVVVATD 220
            A   S   T  L V+++D
Sbjct: 1343 AQPRSTDGTFDLTVLSSD 1360


>gi|392341624|ref|XP_001078424.3| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 1 [Rattus
           norvegicus]
 gi|392349660|ref|XP_001070474.3| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 1 [Rattus
           norvegicus]
          Length = 3075

 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 62/229 (27%), Positives = 106/229 (46%), Gaps = 22/229 (9%)

Query: 13  LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTT--- 69
           L V A+ + +  R A   L V+ + T+     F ++EY     ENL V Y +LT+     
Sbjct: 336 LKVSAVDHGSPRRSAATYLTVTVSDTNDHSPVFEQSEYRERIRENLEVGYEVLTIRATDG 395

Query: 70  NKPRDLRVKYWLSNDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDT-----LMT 123
           + P +  ++Y L    G  F I +R G +     +D E    Y+  V A D       ++
Sbjct: 396 DAPSNANMRYRLLEGAGGVFEIDARSGVVRTRAVVDREEAAEYQLLVEANDQGRNPGPLS 455

Query: 124 TSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS- 182
            SATV+I V + ND  P+F   +Y + +P     D+   + + +V+A D D+G    +  
Sbjct: 456 ASATVHIVVEDENDNYPQFSEKRYVVQVPE----DVAVNTPVLRVQATDRDQGQNAAIHY 511

Query: 183 --LRGPYEKMFSIND-SGHISIV---DLSALNTSTIQLVVVATDTGNPP 225
             + G  +  F ++  SG + ++   D  A+   T++  + A D G PP
Sbjct: 512 SIVSGNLKGQFYLHSLSGSLDVINPLDFEAIREYTLR--IKAQDGGRPP 558



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 53/189 (28%), Positives = 87/189 (46%), Gaps = 14/189 (7%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRDLR--VKYWLSN-DYGERFSISRQ---GDIS 98
           F++  Y +   E+  V   +LT+   + RD    + Y L+  +   RF++S Q   G I+
Sbjct: 702 FTQPVYELRLNEDAAVGSSVLTLRA-RDRDANSVITYQLTGGNTRNRFALSSQSGGGLIT 760

Query: 99  LMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLAD 158
           L   LDY+ E  Y   V A+D   + +A V I+V + N   P F+   Y + +      D
Sbjct: 761 LALPLDYKQERQYVLAVTASDGTRSHTAQVFINVTDANTHRPVFQSSHYTVSVSE----D 816

Query: 159 LTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSINDSGHI-SIVDLSALNTSTIQLV 215
              G+ I  + A D D G+  R+T  L  P  +     D+G I ++ +L   + +   L 
Sbjct: 817 RPVGTSIATISATDEDTGENARITYVLEDPVPQFRIDPDTGTIYTMTELDYEDQAAYTLA 876

Query: 216 VVATDTGNP 224
           + A D G P
Sbjct: 877 ITAQDNGIP 885



 Score = 48.1 bits (113), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 49/168 (29%), Positives = 76/168 (45%), Gaps = 33/168 (19%)

Query: 45  FSKNEYSVSALENLPVNYVLL---TVTTNKPRDLRVKYWLSN------------------ 83
           F  + +  + LEN+P+ + +L    V  +   + R++Y L +                  
Sbjct: 580 FVSSPFQAAVLENVPLGHSVLHIQAVDADAGENARLQYRLVDTASTILGGSSIDSENPVS 639

Query: 84  --DYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVND 137
             D+   F I +  G I++   LD E  + Y F V A D     M++SA+V+I+V++VND
Sbjct: 640 APDF--PFQIHNSSGWITVCAELDRELLEHYSFGVEAVDHGSPPMSSSASVSITVLDVND 697

Query: 138 WDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRG 185
            DP F  P YEL L      D   GS +  + A D D    +T  L G
Sbjct: 698 NDPVFTQPVYELRLNE----DAAVGSSVLTLRARDRDANSVITYQLTG 741



 Score = 45.8 bits (107), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 38/140 (27%), Positives = 65/140 (46%), Gaps = 9/140 (6%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWL-SNDYGERFSISR-QGDISL 99
            F K+E  +   EN PV  V+  +  N P +    ++ Y +   +  E F +    GD+  
Sbjct: 1014 FEKDELELFVEENSPVGSVVARIRANDPDEGPNAQIMYQIVEGNVPEVFQLDLLSGDLRA 1073

Query: 100  MQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPH--IPLA 157
            +  LD+E    Y   V AT   + + ATV+I +++ ND  P    P +++   +     +
Sbjct: 1074 LVELDFEVRRDYMLVVQATSAPLVSRATVHIRLLDQNDNPPEL--PDFQILFNNYVTNKS 1131

Query: 158  DLTPGSVIGKVEAADGDKGD 177
            +  P  VIG++ A D D  D
Sbjct: 1132 NSFPSGVIGRIPAHDPDLSD 1151



 Score = 43.5 bits (101), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 58/231 (25%), Positives = 97/231 (41%), Gaps = 24/231 (10%)

Query: 22  NQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDL---RVK 78
           +Q R  +       AG+S    QF    Y VS  EN P    ++ +  + P +    R+ 
Sbjct: 238 SQPRAGVVRRSRRGAGSSTSP-QFPLPSYQVSVPENEPAGTAVIELRAHDPDEGEAGRLS 296

Query: 79  YWLSNDYGER----FSI-SRQGDISLMQCLDYETEDSYRFTVYATD--TLMTTSAT-VNI 130
           Y +   + ER    F I +  G ++  + LD ET+D++   V A D  +   ++AT + +
Sbjct: 297 YQMEALFDERSNGYFLIDATTGAVTTARALDRETKDTHVLKVSAVDHGSPRRSAATYLTV 356

Query: 131 SVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR--GPYE 188
           +V + ND  P F   +Y   +      +L  G  +  + A DGD      +  R      
Sbjct: 357 TVSDTNDHSPVFEQSEYRERI----RENLEVGYEVLTIRATDGDAPSNANMRYRLLEGAG 412

Query: 189 KMFSINDSGHI----SIVDLSALNTSTIQLVVVATDTGNPPRQASVPAIMH 235
            +F I+    +    ++VD      +  QL+V A D G  P   S  A +H
Sbjct: 413 GVFEIDARSGVVRTRAVVDRE--EAAEYQLLVEANDQGRNPGPLSASATVH 461


>gi|119625347|gb|EAX04942.1| dachsous 2 (Drosophila), isoform CRA_a [Homo sapiens]
          Length = 3371

 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 78/301 (25%), Positives = 132/301 (43%), Gaps = 33/301 (10%)

Query: 11   ITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVN--------- 61
             TL V+A   + +  ++ A + VS    +    QF  + +S    ENLP++         
Sbjct: 2736 FTLTVQASDAEKK-HFSFAVVFVSVLDDNDHAPQFMFSSFSCIVPENLPISSTICSINAL 2794

Query: 62   ------YVLLTVTTNKPRDLRVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTV 115
                  Y  LT +   P    + + +S D+         GDI   Q LDYE  + Y  TV
Sbjct: 2795 DFDAGPYGELTYSIVSP--CFLTHGMSYDHDLFLIDPLTGDIHAKQILDYENGNKYCLTV 2852

Query: 116  YATDTL-MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGD 174
             A D    T S  V + +  +++++P F   QY   LP           +IG+VEA+D D
Sbjct: 2853 QAKDKGDATASLVVWVDIEGIDEFEPIFTQDQYFFTLPE----KNKDRQLIGRVEASDAD 2908

Query: 175  KG-DRVTLSLRGPYEKMFSINDS-GHISIVDL-----SALNTS-TIQLVVVATDTGNPPR 226
             G D V L   G     FS+N + G+I ++       S LN   T+++ ++A    +  +
Sbjct: 2909 AGIDGVILYSLGTSSPFFSVNKTNGNIYLIRALPLIKSQLNKEDTLEMKIIAHSPKSDSK 2968

Query: 227  QASVPAIMHFPEAIVQQASSKLNSGTSSTVLIILGVVLIVLGFVIILLILYIHKNKHTKN 286
             AS    ++   +      +   S  S ++++   V LI++  +I++++   HK K T N
Sbjct: 2969 FASCTVFVNVSFSSEGTPLAVFASSFSISLVVSFLVFLILICILIVMILR--HKQKDTIN 3026

Query: 287  N 287
            N
Sbjct: 3027 N 3027



 Score = 51.6 bits (122), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 55/201 (27%), Positives = 93/201 (46%), Gaps = 14/201 (6%)

Query: 38   TSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLR--VKYWLSN-DYGERFSIS-R 93
            T+L   +F + +Y+    E++P +  + TV   +P +    + Y +S+ D G +FSI  R
Sbjct: 869  TTLAPAEFERPKYTFLVYEDVPEDSPIGTVKAREPLNSSEPIFYRISSGDLGGKFSIHPR 928

Query: 94   QGDISLMQCLDYETEDSYRFTVYAT--DTLMTTSATVNISVVNVNDWDPRFRYPQYELFL 151
             G I   + LD+ET+     TV A        +S  VNI+V++VND  P F     E+ +
Sbjct: 929  LGTIRTRKPLDHETQPVVVLTVQAQLGSAPACSSTEVNITVMDVNDNHPAFLRTSDEIRI 988

Query: 152  PHIPLADLTPGSVIGKVEAADGDKGDR--VTLSLRGPYEKMFSINDSGHISIVD--LSAL 207
                     PG+ +    A D D G    +  S+  P   +F+I+ +  +  ++  L A 
Sbjct: 989  SQT----TPPGTALYLARAEDRDSGRNGLIRYSIASPQPGVFAIDRALGVLFLNGSLGAG 1044

Query: 208  NTSTIQLVVVATDTGNPPRQA 228
                + L + A D G  P+ A
Sbjct: 1045 EQRELTLTLRAEDQGVHPQAA 1065



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 46/144 (31%), Positives = 66/144 (45%), Gaps = 13/144 (9%)

Query: 95   GDISLMQCLDYETEDSYRFTVYA----TDTLMTTSATVNISVVNVNDWDPRFRYPQYELF 150
            G I L +  DYE+  +Y F V+A       L   S TV + V + ND  P F +    L 
Sbjct: 1140 GWIYLRRQFDYESTQTYNFRVFAWIPEDGFLQNVSTTVIVRVWDENDNSPTFLHDVLFLK 1199

Query: 151  LPHIPLADLTPGSVIGKVEAADGDKGDRVTLSL----RGPYEKMFSINDSGHISIVDLSA 206
            +   P+    P  VIGK+ A D D G    L       G + KM + N    I+ V L  
Sbjct: 1200 VEESPV----PQGVIGKITAIDMDSGKNGQLLYFLLSDGKFFKM-NPNTGELINWVALDR 1254

Query: 207  LNTSTIQLVVVATDTGNPPRQASV 230
             +    ++ V+ TD G+PPR A++
Sbjct: 1255 EHRGHHEMTVLVTDRGSPPRNATM 1278



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 57/209 (27%), Positives = 95/209 (45%), Gaps = 30/209 (14%)

Query: 56   ENLPVNYVLLTVTTNKP---RDLRVKY-WLSNDYGERFSISRQGDISLMQC-LDYETEDS 110
            E++ V  ++  +T + P   R+ +V Y  LS +    F +     +    C LDYE +  
Sbjct: 1630 EDVTVGSLVHHITAHDPDEGRNGKVTYSILSGNENMTFMLDESSGLLTTTCPLDYEMKTQ 1689

Query: 111  YRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGK 167
            +  TV A D     +++S T+ ++V++VND  P F+   YE  +      +  PG  + +
Sbjct: 1690 HILTVLALDDGTPALSSSQTLTVTVLDVNDEAPVFKQHLYEASVKE----NQNPGEFVTR 1745

Query: 168  VEAADGDKGDRVTLSLR---GPYEKMFSIN-DSGHI---SIVDLSALNTSTIQLVVVATD 220
            VEA D D G    L      G   ++F IN D+G +   +I+D       T++++V    
Sbjct: 1746 VEALDRDSGVNSKLQFEIMPGASFELFEINSDTGEVVTTTILDREIQEVFTLRVLV---R 1802

Query: 221  TGNPPRQASVPAIM--------HFPEAIV 241
             G  P  +S   I+        H PE IV
Sbjct: 1803 DGGFPSLSSTTTILCTVEDENDHAPEFIV 1831



 Score = 44.7 bits (104), Expect = 0.072,   Method: Compositional matrix adjust.
 Identities = 43/148 (29%), Positives = 77/148 (52%), Gaps = 11/148 (7%)

Query: 86   GERFSISRQ-GDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRY 144
            G +F+I +  G + L++ LD+E    Y   +  +D++  T   + + V++VND  P F  
Sbjct: 2390 GTKFAIDQNTGVVVLVKTLDFEEMTEYELLIQISDSVHYTEGALVVRVLDVNDNPPVFSQ 2449

Query: 145  PQYELFLPH-IPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSIN-DSGHI-SI 201
              Y++ +P  IP+     G  +  + A D +  + ++  +     K FSI+  +G I +I
Sbjct: 2450 DFYQVTVPESIPV-----GYSVLTLSATDLESNENISYRILSS-SKEFSIDPKNGTIFTI 2503

Query: 202  VDLSALNT-STIQLVVVATDTGNPPRQA 228
              +  L+T ST Q +V A+D GNP  +A
Sbjct: 2504 SPVLLLDTISTTQFLVEASDGGNPDLRA 2531



 Score = 41.2 bits (95), Expect = 0.77,   Method: Compositional matrix adjust.
 Identities = 53/198 (26%), Positives = 86/198 (43%), Gaps = 16/198 (8%)

Query: 50   YSVSALENLPVNYVLLTVTT-NKPRDL--RVKYWLSNDYGERFSIS-RQGDISLMQCLDY 105
            Y  S  E+  V  V+L ++  +K   L  + +Y+L+++    F+I    G +     LD 
Sbjct: 1938 YQSSVREDAEVGTVVLVLSAVDKDEGLNGQTEYFLTDEASGAFTIDPMSGTLKTSNTLDR 1997

Query: 106  ETEDSYRFTVYATDTLM----TTSATVNISVVNVNDWDPRFRYPQYELFL-PHIPLADLT 160
            E    + F+  A D  +    +T+  + + V +VND DP      +++FL P  P    T
Sbjct: 1998 EARSQHTFSAVARDCSIQGSRSTTVIIKVYVTDVNDNDPVLEQNPFDVFLSPESPTNQTT 2057

Query: 161  PGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSIND-SGHISIVDLSALNTSTIQLVVVA 218
               VI  V A D D G   T+       + MFSI+  +G I      +     I L +  
Sbjct: 2058 ---VI--VRADDLDLGPNGTVVFSFAETQSMFSIDKYTGEIQFQQNPSSEYFPIWLQLKV 2112

Query: 219  TDTGNPPRQASVPAIMHF 236
            TD G P R  +   ++H 
Sbjct: 2113 TDQGIPARTTTGLLVIHM 2130



 Score = 40.8 bits (94), Expect = 0.98,   Method: Compositional matrix adjust.
 Identities = 48/199 (24%), Positives = 87/199 (43%), Gaps = 18/199 (9%)

Query: 45   FSKNEYSVSALENL-PVNYVLLTVTTNKPRDLRVKYWLSNDYGERFSI----SRQGDISL 99
            F ++ Y  S  EN  P  +V      ++   +  K       G  F +    S  G++  
Sbjct: 1724 FKQHLYEASVKENQNPGEFVTRVEALDRDSGVNSKLQFEIMPGASFELFEINSDTGEVVT 1783

Query: 100  MQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
               LD E ++ +   V   D     ++++ T+  +V + ND  P F    Y++ +    L
Sbjct: 1784 TTILDREIQEVFTLRVLVRDGGFPSLSSTTTILCTVEDENDHAPEFIVSSYDIEV----L 1839

Query: 157  ADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIND-SGHISIVD-LSALNTST 211
             +  P  V+  V A+D D G+   +    + G  ++ F+IN+ SG +S    L     S 
Sbjct: 1840 ENQEP-EVVYTVLASDMDAGNNRAVEYHIIDGNTDECFTINEMSGELSTTRALDREQISN 1898

Query: 212  IQLVVVATDTGNPPRQASV 230
              LV++ +D G+PPR + +
Sbjct: 1899 FTLVILCSDLGDPPRSSVI 1917



 Score = 40.4 bits (93), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 38/148 (25%), Positives = 66/148 (44%), Gaps = 19/148 (12%)

Query: 56   ENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTV 115
            EN  V Y +++  +     +  K++ S      +   + G + L+  LD E   S+   +
Sbjct: 2581 ENTYVEYSIISGNSQNNFHVETKFFHS-----EYPYKQVGYLVLLHSLDREASASHELVI 2635

Query: 116  YATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTP-GSVIGKVEAA 171
             A+D+    ++++A ++I V++VND  P F    Y     H  + + TP GS I  V A 
Sbjct: 2636 LASDSGCPPLSSTAVISIQVLDVNDNPPNFSSLSY-----HTHVKESTPLGSHITVVSAN 2690

Query: 172  DGDKGDRVTLSLRGPYEKMFSINDSGHI 199
            D D G    +        + S N+ GH 
Sbjct: 2691 DRDTGSHAEI-----IYNIISGNEKGHF 2713



 Score = 39.3 bits (90), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 38/140 (27%), Positives = 61/140 (43%), Gaps = 13/140 (9%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRD----LRVKYWL--SNDYGERFSISRQGDIS 98
            FS   Y     E+ P+   +  V+ N  RD      + Y +   N+ G  +     G + 
Sbjct: 2665 FSSLSYHTHVKESTPLGSHITVVSAND-RDTGSHAEIIYNIISGNEKGHFYLEENTGVLY 2723

Query: 99   LMQCLDYETEDSYRFTVYATDTLMT--TSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
            L++ LDYE    +  TV A+D      + A V +SV++ ND  P+F +  +   +P    
Sbjct: 2724 LIKPLDYEKMTKFTLTVQASDAEKKHFSFAVVFVSVLDDNDHAPQFMFSSFSCIVPE--- 2780

Query: 157  ADLTPGSVIGKVEAADGDKG 176
             +L   S I  + A D D G
Sbjct: 2781 -NLPISSTICSINALDFDAG 2799



 Score = 39.3 bits (90), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 46/155 (29%), Positives = 67/155 (43%), Gaps = 31/155 (20%)

Query: 103 LDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADL 159
           LD E+ D Y   + ATD     ++T  T+ + V ++ND  P F    Y+  +        
Sbjct: 497 LDRESRDLYELLLVATDAGSPPLSTEETLLLRVADLNDQPPLFSQQHYKASVSEAA---- 552

Query: 160 TPGSVIGKVEAADGDKGD------RVTL-SLRGPY------EKM---------FSIN-DS 196
            PG+V+  V A+D D+        R T+  L  P        KM         F+I+ +S
Sbjct: 553 APGTVVMWVSASDADEAGSDHAWLRYTVVQLSAPCNLGSLQSKMVHTAECGPSFAIDSES 612

Query: 197 GHIS-IVDLSALNTSTIQLVVVATDTGNPPRQASV 230
           G IS I  L       ++L VVA D G PP  A+ 
Sbjct: 613 GAISTIRTLDREVQEAVELKVVAQDLGEPPLSATC 647



 Score = 38.5 bits (88), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 32/93 (34%), Positives = 44/93 (47%), Gaps = 8/93 (8%)

Query: 49   EYSVSALENLPVNYVLLTVTTNKP---RDLRVKYWLSN-DYGERFSI-SRQGDISLMQCL 103
            E  V  LE  PVN ++ TV    P    +  V Y +S+ D  + F I +  G+I     L
Sbjct: 1302 ELHVKVLEGQPVNMLVTTVFAKDPDEGNNAEVTYSVSSEDSSDHFKIDANSGEIRTTTIL 1361

Query: 104  DYETEDSYRFTVYATDT---LMTTSATVNISVV 133
             Y+   SYR +V ATD     +   A VNI V+
Sbjct: 1362 SYDYRPSYRMSVIATDQGVPPLQGQAVVNIQVI 1394


>gi|195435720|ref|XP_002065827.1| GK20296 [Drosophila willistoni]
 gi|194161912|gb|EDW76813.1| GK20296 [Drosophila willistoni]
          Length = 4674

 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 68/236 (28%), Positives = 105/236 (44%), Gaps = 19/236 (8%)

Query: 13   LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKP 72
            L V+A  +     Y+ A L+++    +    +FS  +Y     EN  +   + TV     
Sbjct: 3236 LTVKAEDHGVPRLYSTANLLINILDINDNPPEFSLRQYLCQVHENATIGVEVCTVYATS- 3294

Query: 73   RDLRVK-----YWLSNDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDTL---MT 123
            +D+ V      Y +  +   +FSI S+ G ++L + LDYE    Y  T+ A D     ++
Sbjct: 3295 KDIGVNADILYYIMGGNEQRKFSIDSKTGALTLNESLDYEMSKYYYLTIQAIDRGTPPLS 3354

Query: 124  TSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSL 183
              A VNISV++VND  P+F    Y + +    L D+  G  I  V+A D D G    L  
Sbjct: 3355 NIAHVNISVLDVNDNSPKFVQDIYRVNV----LEDIALGKQIATVKAIDDDAGLNAKLHY 3410

Query: 184  R---GPYEKMFSIND-SGHISIVD-LSALNTSTIQLVVVATDTGNPPRQASVPAIM 234
                G     FSI++ +G I +   L     +   L + A D G P R  SV  I+
Sbjct: 3411 NINGGDNFGQFSIDEINGTICVARPLDRETKAKYNLEIQACDGGIPQRCGSVQIII 3466



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 57/201 (28%), Positives = 96/201 (47%), Gaps = 31/201 (15%)

Query: 45   FSKNEYSVSALENLPVNYVL-LTVTTNKPRDLRVKYWLSN-DYGERFSIS-RQGDISLMQ 101
            F K  Y VS  E++ +  VL +++    P + ++ Y +S+ D  + F I    G I ++ 
Sbjct: 2232 FEKQFYDVSVKEDVEIYSVLSISIEAQSPLNRKLIYTISSEDKDQHFEIDYNTGSIYVVS 2291

Query: 102  CLDYETEDSYRFTVYATDTL--MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADL 159
             L+YE + ++  T+ ATD+   +     ++++V++VND      YP+ E  + +I L + 
Sbjct: 2292 ELNYEEQTNHDITIRATDSFSGIYVEVFLSVTVIDVNDC-----YPEIESDIYNITLPEN 2346

Query: 160  TP-GSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDS---------GHISI-----VDL 204
            TP  S I K+ A D D G    LS     E + S NDS         GH+ +      +L
Sbjct: 2347 TPFASQILKINATDADTGANAKLSYF--IESINSENDSEIFYIDINEGHLYLKKPLDYEL 2404

Query: 205  SALNTSTIQLVVVATDTGNPP 225
               +     +VV   D G+PP
Sbjct: 2405 KKFH----HIVVHVKDHGSPP 2421



 Score = 48.5 bits (114), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 37/128 (28%), Positives = 61/128 (47%), Gaps = 9/128 (7%)

Query: 79   YWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDW 138
            Y ++ D   +F I + G++ + + LD E    Y  ++ ATD      A V I V ++ND 
Sbjct: 2997 YIIAGDNQSQFQIGKTGELFITKQLDRENISFYNLSLLATDGKFIAEANVEIQVKDINDN 3056

Query: 139  DPRFRYPQYELFLPHIPLADLTP-GSVIGKVEAADGDKGDRVTLS--LRGPYEKMFSIN- 194
             P    P+Y     HI + +  P G+V+  V+A D D  D   L   + G     F+I+ 
Sbjct: 3057 LPYCLKPRY-----HINVNESIPAGTVLTDVKAIDFDSSDDFKLRYFISGKGSDDFTIDK 3111

Query: 195  DSGHISIV 202
            D G + ++
Sbjct: 3112 DKGSLKVI 3119



 Score = 48.1 bits (113), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 61/235 (25%), Positives = 103/235 (43%), Gaps = 31/235 (13%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTV-TTNKPRDLRVKYWLSNDYGER----FSI-SRQGDI 97
            QF+K+ Y V+  EN+    +++ +  T+K  D ++ Y L           F I S  G++
Sbjct: 1500 QFTKDIYHVNISENIEEESIIMQLHATDKDEDKKLFYHLHATQDPSSLALFRIDSISGNV 1559

Query: 98   SLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQY--ELFLPHIP 155
             + Q LD+E    +   V+  D    T    N + + VN  D    YP++  ++    +P
Sbjct: 1560 IVTQRLDFEKTAQHILVVFVKD--QGTPGKRNYAKIIVNVHDHNDHYPEFTAKIIQSKVP 1617

Query: 156  LADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSINDSGHISIVDLSA-LNTST 211
             +    GS + +V A D D G    L    + G    +F+I+ +    I+ L+  LN + 
Sbjct: 1618 ES-AAIGSKLTEVLAIDRDSGQNAELRYFIITGNVGSVFAIDST--FGIITLAGKLNINN 1674

Query: 212  IQ---LVVVATDTGNPPRQASVPAIM-----------HFPEAIVQQASSKLNSGT 252
            +Q   L + A D GNP   + +P  +            FP AIV +    L+ GT
Sbjct: 1675 VQEYMLQIKAADQGNPSLSSQIPVHIIVTMSENDPPKFFPNAIVLEIFENLSVGT 1729



 Score = 47.4 bits (111), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 47/175 (26%), Positives = 79/175 (45%), Gaps = 20/175 (11%)

Query: 89   FSISR-QGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQY 147
            F I R  G+I L + LDYE + SY  T+  TD        + I V++ ND  P+F    Y
Sbjct: 1447 FYIGRDNGNILLSKPLDYEKQTSYNLTISVTDGSNIIYTNLFIQVIDTNDNTPQFTKDIY 1506

Query: 148  ELFLPHIPLAD-LTPGSVIGKVEAADGDKGDRVTLSLRGPYE----KMFSIND-SGHISI 201
                 H+ +++ +   S+I ++ A D D+  ++   L    +     +F I+  SG++ +
Sbjct: 1507 -----HVNISENIEEESIIMQLHATDKDEDKKLFYHLHATQDPSSLALFRIDSISGNVIV 1561

Query: 202  VD-LSALNTSTIQLVVVATDTGNPPRQASVPAIM-------HFPEAIVQQASSKL 248
               L    T+   LVV   D G P ++     I+       H+PE   +   SK+
Sbjct: 1562 TQRLDFEKTAQHILVVFVKDQGTPGKRNYAKIIVNVHDHNDHYPEFTAKIIQSKV 1616



 Score = 45.4 bits (106), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 51/167 (30%), Positives = 80/167 (47%), Gaps = 21/167 (12%)

Query: 78   KYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVN 134
            K+ +S D  ++F +S  G++ L Q LD E ++++   V A  T   ++   A V I V +
Sbjct: 2787 KFSISEDQ-DKFYVSDTGELILEQTLDREQKETHYLIVVAETTTVPILYAYADVVIHVRD 2845

Query: 135  VNDWDPRFRYPQYELFLPHIPLADLTPGSV-IGKVEAADGDKG--DRVTLSLRGPYEKMF 191
             ND      YPQ++       +A+ T   V I K+ A D D G    V        E + 
Sbjct: 2846 END-----NYPQFDSSFYSASVAENTDKVVSIVKITATDADSGPNGDVRYYFENDSESVS 2900

Query: 192  SIND----SGHISIVDLSALNT---STIQLVVVATDTGNPPRQASVP 231
            +I D    +G I++  L++L+    S   L V+ATD G+P   A VP
Sbjct: 2901 NIFDIDIYTGWITL--LASLDRELRSEYDLKVIATDNGHPKHDAKVP 2945



 Score = 45.1 bits (105), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 54/183 (29%), Positives = 80/183 (43%), Gaps = 13/183 (7%)

Query: 62   YVLLTVTTNKPRDLRVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDT- 120
            Y L     +   +  + Y LS D  +       G I L + LD E +D Y   + A D  
Sbjct: 892  YCLYATDADSGVNGYITYELSVDCDDFVVNKTTGCIVLSKPLDREKQDRYALHITAKDGG 951

Query: 121  --LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG-- 176
               +++ A V I V +VND  P F   +Y   +      DL  G+VI  +EA D D G  
Sbjct: 952  TPTLSSEALVYILVDDVNDNAPVFGVQEYIFKVRE----DLPRGTVIAVIEAIDQDIGPN 1007

Query: 177  DRVTLSLR-GPY-EKMFSIND-SGHISIVD-LSALNTSTIQLVVVATDTGNPPRQASVPA 232
              +  SL+  P  E +F ++  SG I     L+  N     LVV A D G+P   + +P 
Sbjct: 1008 ANILFSLKEDPQDEGLFQVDKYSGAIRTQGYLNYENRQVHNLVVSAIDGGSPSLTSDMPI 1067

Query: 233  IMH 235
            ++ 
Sbjct: 1068 VIE 1070



 Score = 42.7 bits (99), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 54/203 (26%), Positives = 91/203 (44%), Gaps = 25/203 (12%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWL------SNDYGERFSIS-RQGDI 97
           F++  Y VS  E  P+N  ++ +  + P DL  KY L        + G  F I+   G +
Sbjct: 396 FTQEIYEVSIPETAPINMPVIRLKVSDP-DLG-KYALVYLEIVGGNEGGEFRINPDSGML 453

Query: 98  SLMQCLDYETEDSYRFTVYATD-----TLMTTSATVNISVVNVNDWDPRFRYPQYELFLP 152
              + LD E +  +  TV A D     +   +SA V I++ ++ND DP F      + + 
Sbjct: 454 YTKKQLDAERKSQFTLTVSAIDQANVGSRKQSSAKVKINIQDMNDNDPIFENMNRNISIN 513

Query: 153 HIPLADLTPGSVIGKVEAADGDKGDR--VTLSLRGPYEKMFSINDSGHI----SIVDLSA 206
              L+    GS + KV A D D G+   ++ S+       F I+    I    S++D   
Sbjct: 514 ENNLS----GSFVAKVSAKDKDSGENAYISYSIANLNTVPFEIDHFTGIIRTTSLIDFET 569

Query: 207 LNTSTIQLVVVATDTGNPPRQAS 229
           +  +   L++ A+D G P R+ +
Sbjct: 570 MRRN-YALIIRASDWGLPYRRQT 591



 Score = 39.7 bits (91), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 37/131 (28%), Positives = 64/131 (48%), Gaps = 12/131 (9%)

Query: 103  LDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADL 159
            LD E +  +   V  +D    ++ ++  + ++V+++ND  P F    Y++ +P    A+ 
Sbjct: 1252 LDRENQAEHILEVAISDNGSPVLASTTRIVVNVLDINDNSPEFDQRAYKIQVPSTATANE 1311

Query: 160  TPGSVIGKVEAADGDKGD--RVTLSLR-GPYEKMFSI-NDSGHISIVDLSALNTSTIQLV 215
            +    I +V A D D G+  R+T S++ G  +  F I N SGHI I   S       ++ 
Sbjct: 1312 S----IFQVHAIDIDDGENGRITYSIKSGKGKNKFRIDNASGHIFITK-SLEPDFEFEIN 1366

Query: 216  VVATDTGNPPR 226
            + A D G P R
Sbjct: 1367 IRAEDNGTPKR 1377



 Score = 38.9 bits (89), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 48/195 (24%), Positives = 85/195 (43%), Gaps = 30/195 (15%)

Query: 45   FSKNEYSVSALENLPVNYVLLTV----------TTNKPRDLRVKYWLSNDYGERFSISRQ 94
            FS   Y++   EN P+ YVL+T           +T    D+R     S + G  F + + 
Sbjct: 3478 FSSPNYTIVLQENRPLGYVLITFDVSDADEPPNSTPYTFDIR-----SGNEGGLFRLEQD 3532

Query: 95   GDISLMQCLDYETEDSYRFTVYATDTL---MTTSATVNISVVNVNDWDPRFRYPQYELFL 151
            G +S     +++ +D +   +   D     + +   V + ++  + + P        L +
Sbjct: 3533 GSLSTASRFNHKLQDEFSIQIRVFDNGTPPLYSDTWVQVKIIEESQYPPIVT----PLEI 3588

Query: 152  PHIPLADLTPGSVIGKVEAADGDKGDRVTLSL---RGPY--EKMFSIND-SGHISIVDLS 205
                L D   G+ IGK+ A+D DK D +T SL   +  Y   K+F+I   +G I ++  S
Sbjct: 3589 TVNSLEDDFSGAFIGKLHASDQDKYDELTYSLVVTKAEYITSKLFNITKTTGKIYVI--S 3646

Query: 206  ALNTSTIQLVVVATD 220
             L+    +L V  +D
Sbjct: 3647 NLDIGQYKLNVSVSD 3661


>gi|218505793|ref|NP_001136244.1| protocadherin-15 isoform CD3-2 precursor [Homo sapiens]
          Length = 1677

 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 61/195 (31%), Positives = 100/195 (51%), Gaps = 14/195 (7%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGER-FSISRQ-GDISLMQ 101
           +F +  YS+   E + V  VLL +         + Y + N   +R F++S   G ++L +
Sbjct: 615 RFPQLMYSLEISEAMRVGAVLLNLQATDREGDSITYAIENGDPQRVFNLSETTGILTLGK 674

Query: 102 CLDYETEDSYRFTVYATDTL--MTTSATVNISVVNVNDWDPRFRYPQYELFLP-HIPLAD 158
            LD E+ D Y   + A+D     T++ATVNI V +VND  P F     + +LP ++ + +
Sbjct: 675 ALDRESTDRYILIITASDGRPDGTSTATVNIVVTDVNDNAPVF-----DPYLPRNLSVVE 729

Query: 159 LTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDSGHI-SIVDLSALNTSTIQLV 215
               + +G+V+A D D G   +V  SL G +  +F I  +G I + V L+       +LV
Sbjct: 730 EEANAFVGQVKATDPDAGINGQVHYSL-GNFNNLFRITSNGSIYTAVKLNREVRDYYELV 788

Query: 216 VVATDTGNPPRQASV 230
           VVATD    PR +++
Sbjct: 789 VVATDGAVHPRHSTL 803



 Score = 55.5 bits (132), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 62/241 (25%), Positives = 105/241 (43%), Gaps = 27/241 (11%)

Query: 6   DFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVN---- 61
           DF Q   LV++A Q +     A A L +     + +   F+   Y    LE+ PV     
Sbjct: 356 DFHQKFDLVIKAEQDNGHPLPAFAGLHIEILDENNQSPYFTMPSYQGYILESAPVGATIS 415

Query: 62  ----------YVLLTVTTNKPRDLRVKYWLSNDYGERFSISRQG---DISLMQCLDYETE 108
                      V L       +D  +  +L NDY   F++++ G    ++L+Q +D E +
Sbjct: 416 DSLNLTSPLRIVALDKDIEDTKDPELHLFL-NDYTSVFTVTQTGITRYLTLLQPVDREEQ 474

Query: 109 DSYRFTVYATDTLMTTSAT-VNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGK 167
            +Y F++ A D +  +    VNI V++ ND  P F    Y++++      D+ PG  + +
Sbjct: 475 QTYTFSITAFDGVQESEPVIVNIQVMDANDNTPTFPEISYDVYV----YTDMRPGDSVIQ 530

Query: 168 VEAADGDKGD--RVTLSLRGPYEKMFSIND-SGHISIV-DLSALNTSTIQLVVVATDTGN 223
           + A D D+G    +T  +    +  F IN  +G I+I   +  +   T  L V A D   
Sbjct: 531 LTAVDADEGSNGEITYEILVGAQGDFIINKTTGLITIAPGVEMIVGRTYALTVQAADNAP 590

Query: 224 P 224
           P
Sbjct: 591 P 591



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 71/233 (30%), Positives = 103/233 (44%), Gaps = 26/233 (11%)

Query: 13   LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKP 72
            LVV A       R++  TL +           F+ + Y+V   ENLP    +L +   K 
Sbjct: 787  LVVVATDGAVHPRHSTLTLAIKVLDIDDNSPVFTNSTYTVLVEENLPAGTTILQIEA-KD 845

Query: 73   RDL--RVKYWLSNDYGERFSISR--QGDISLMQCLDYET----EDSYRFTVYATD---TL 121
             DL   V Y + +   + F       G++SL++ LDYE     E S  F V A D   T+
Sbjct: 846  VDLGANVSYRIRSPEVKHFFALHPFTGELSLLRSLDYEAFPDQEASITFLVEAFDIYGTM 905

Query: 122  MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDK----GD 177
                ATV + V ++ND+ P F    Y+  +      D   G+ I  V A D D       
Sbjct: 906  PPGIATVTVIVKDMNDYPPVFSKRIYKGMV----APDAVKGTPITTVYAEDADPPGLPAS 961

Query: 178  RVTL---SLRGPY-EKMFSIN-DSGH-ISIVDLSALNTSTIQLVVVATDTGNP 224
            RV      ++ PY   +F +  DSG  I+ V+L+   T+  +LVVVA D G P
Sbjct: 962  RVRYRVDDVQFPYPASIFEVEEDSGRVITRVNLNEEPTTIFKLVVVAFDDGEP 1014



 Score = 46.2 bits (108), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 56/119 (47%), Gaps = 8/119 (6%)

Query: 76  RVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDTLMT---TSATVNISV 132
           +V Y L N +   F I+  G I     L+ E  D Y   V ATD  +    ++ T+ I V
Sbjct: 751 QVHYSLGN-FNNLFRITSNGSIYTAVKLNREVRDYYELVVVATDGAVHPRHSTLTLAIKV 809

Query: 133 VNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMF 191
           ++++D  P F    Y + +      +L  G+ I ++EA D D G  V+  +R P  K F
Sbjct: 810 LDIDDNSPVFTNSTYTVLVEE----NLPAGTTILQIEAKDVDLGANVSYRIRSPEVKHF 864


>gi|218505791|ref|NP_001136243.1| protocadherin-15 isoform CD3-1 precursor [Homo sapiens]
          Length = 1682

 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 61/195 (31%), Positives = 100/195 (51%), Gaps = 14/195 (7%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGER-FSISRQ-GDISLMQ 101
           +F +  YS+   E + V  VLL +         + Y + N   +R F++S   G ++L +
Sbjct: 620 RFPQLMYSLEISEAMRVGAVLLNLQATDREGDSITYAIENGDPQRVFNLSETTGILTLGK 679

Query: 102 CLDYETEDSYRFTVYATDTL--MTTSATVNISVVNVNDWDPRFRYPQYELFLP-HIPLAD 158
            LD E+ D Y   + A+D     T++ATVNI V +VND  P F     + +LP ++ + +
Sbjct: 680 ALDRESTDRYILIITASDGRPDGTSTATVNIVVTDVNDNAPVF-----DPYLPRNLSVVE 734

Query: 159 LTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDSGHI-SIVDLSALNTSTIQLV 215
               + +G+V+A D D G   +V  SL G +  +F I  +G I + V L+       +LV
Sbjct: 735 EEANAFVGQVKATDPDAGINGQVHYSL-GNFNNLFRITSNGSIYTAVKLNREVRDYYELV 793

Query: 216 VVATDTGNPPRQASV 230
           VVATD    PR +++
Sbjct: 794 VVATDGAVHPRHSTL 808



 Score = 55.5 bits (132), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 62/241 (25%), Positives = 105/241 (43%), Gaps = 27/241 (11%)

Query: 6   DFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVN---- 61
           DF Q   LV++A Q +     A A L +     + +   F+   Y    LE+ PV     
Sbjct: 361 DFHQKFDLVIKAEQDNGHPLPAFAGLHIEILDENNQSPYFTMPSYQGYILESAPVGATIS 420

Query: 62  ----------YVLLTVTTNKPRDLRVKYWLSNDYGERFSISRQG---DISLMQCLDYETE 108
                      V L       +D  +  +L NDY   F++++ G    ++L+Q +D E +
Sbjct: 421 DSLNLTSPLRIVALDKDIEDTKDPELHLFL-NDYTSVFTVTQTGITRYLTLLQPVDREEQ 479

Query: 109 DSYRFTVYATDTLMTTSAT-VNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGK 167
            +Y F++ A D +  +    VNI V++ ND  P F    Y++++      D+ PG  + +
Sbjct: 480 QTYTFSITAFDGVQESEPVIVNIQVMDANDNTPTFPEISYDVYV----YTDMRPGDSVIQ 535

Query: 168 VEAADGDKGD--RVTLSLRGPYEKMFSIND-SGHISIV-DLSALNTSTIQLVVVATDTGN 223
           + A D D+G    +T  +    +  F IN  +G I+I   +  +   T  L V A D   
Sbjct: 536 LTAVDADEGSNGEITYEILVGAQGDFIINKTTGLITIAPGVEMIVGRTYALTVQAADNAP 595

Query: 224 P 224
           P
Sbjct: 596 P 596



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 71/233 (30%), Positives = 103/233 (44%), Gaps = 26/233 (11%)

Query: 13   LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKP 72
            LVV A       R++  TL +           F+ + Y+V   ENLP    +L +   K 
Sbjct: 792  LVVVATDGAVHPRHSTLTLAIKVLDIDDNSPVFTNSTYTVLVEENLPAGTTILQIEA-KD 850

Query: 73   RDL--RVKYWLSNDYGERFSISR--QGDISLMQCLDYET----EDSYRFTVYATD---TL 121
             DL   V Y + +   + F       G++SL++ LDYE     E S  F V A D   T+
Sbjct: 851  VDLGANVSYRIRSPEVKHFFALHPFTGELSLLRSLDYEAFPDQEASITFLVEAFDIYGTM 910

Query: 122  MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDK----GD 177
                ATV + V ++ND+ P F    Y+  +      D   G+ I  V A D D       
Sbjct: 911  PPGIATVTVIVKDMNDYPPVFSKRIYKGMV----APDAVKGTPITTVYAEDADPPGLPAS 966

Query: 178  RVTL---SLRGPY-EKMFSIN-DSGH-ISIVDLSALNTSTIQLVVVATDTGNP 224
            RV      ++ PY   +F +  DSG  I+ V+L+   T+  +LVVVA D G P
Sbjct: 967  RVRYRVDDVQFPYPASIFEVEEDSGRVITRVNLNEEPTTIFKLVVVAFDDGEP 1019



 Score = 46.2 bits (108), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 56/119 (47%), Gaps = 8/119 (6%)

Query: 76  RVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDTLMT---TSATVNISV 132
           +V Y L N +   F I+  G I     L+ E  D Y   V ATD  +    ++ T+ I V
Sbjct: 756 QVHYSLGN-FNNLFRITSNGSIYTAVKLNREVRDYYELVVVATDGAVHPRHSTLTLAIKV 814

Query: 133 VNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMF 191
           ++++D  P F    Y + +      +L  G+ I ++EA D D G  V+  +R P  K F
Sbjct: 815 LDIDDNSPVFTNSTYTVLVEE----NLPAGTTILQIEAKDVDLGANVSYRIRSPEVKHF 869


>gi|194591875|gb|ACF76477.1| protocadherin-15-CD2 isoform 2 [Homo sapiens]
          Length = 1520

 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 61/195 (31%), Positives = 100/195 (51%), Gaps = 14/195 (7%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGER-FSISRQ-GDISLMQ 101
           +F +  YS+   E + V  VLL +         + Y + N   +R F++S   G ++L +
Sbjct: 615 RFPQLMYSLEISEAMRVGAVLLNLQATDREGDSITYAIENGDPQRVFNLSETTGILTLGK 674

Query: 102 CLDYETEDSYRFTVYATDTL--MTTSATVNISVVNVNDWDPRFRYPQYELFLP-HIPLAD 158
            LD E+ D Y   + A+D     T++ATVNI V +VND  P F     + +LP ++ + +
Sbjct: 675 ALDRESTDRYILIITASDGRPDGTSTATVNIVVTDVNDNAPVF-----DPYLPRNLSVVE 729

Query: 159 LTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDSGHI-SIVDLSALNTSTIQLV 215
               + +G+V+A D D G   +V  SL G +  +F I  +G I + V L+       +LV
Sbjct: 730 EEANAFVGQVKATDPDAGINGQVHYSL-GNFNNLFRITSNGSIYTAVKLNREVRDYYELV 788

Query: 216 VVATDTGNPPRQASV 230
           VVATD    PR +++
Sbjct: 789 VVATDGAVHPRHSTL 803



 Score = 55.1 bits (131), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 62/241 (25%), Positives = 105/241 (43%), Gaps = 27/241 (11%)

Query: 6   DFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVN---- 61
           DF Q   LV++A Q +     A A L +     + +   F+   Y    LE+ PV     
Sbjct: 356 DFHQKFDLVIKAEQDNGHPLPAFAGLHIEILDENNQSPYFTMPSYQGYILESAPVGATIS 415

Query: 62  ----------YVLLTVTTNKPRDLRVKYWLSNDYGERFSISRQG---DISLMQCLDYETE 108
                      V L       +D  +  +L NDY   F++++ G    ++L+Q +D E +
Sbjct: 416 DSLNLTSPLRIVALDKDIEDTKDPELHLFL-NDYTSVFTVTQTGITRYLTLLQPVDREEQ 474

Query: 109 DSYRFTVYATDTLMTTS-ATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGK 167
            +Y F++ A D +  +    VNI V++ ND  P F    Y++++      D+ PG  + +
Sbjct: 475 QTYTFSITAFDGVQESEPVIVNIQVMDANDNTPTFPEISYDVYV----YTDMRPGDSVIQ 530

Query: 168 VEAADGDKGD--RVTLSLRGPYEKMFSIND-SGHISIV-DLSALNTSTIQLVVVATDTGN 223
           + A D D+G    +T  +    +  F IN  +G I+I   +  +   T  L V A D   
Sbjct: 531 LTAVDADEGSNGEITYEILVGAQGDFIINKTTGLITIAPGVEMIVGRTYALTVQAADNAP 590

Query: 224 P 224
           P
Sbjct: 591 P 591



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 71/233 (30%), Positives = 103/233 (44%), Gaps = 26/233 (11%)

Query: 13   LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKP 72
            LVV A       R++  TL +           F+ + Y+V   ENLP    +L +   K 
Sbjct: 787  LVVVATDGAVHPRHSTLTLAIKVLDIDDNSPVFTNSTYTVLVEENLPAGTTILQIEA-KD 845

Query: 73   RDL--RVKYWLSNDYGERFSISR--QGDISLMQCLDYET----EDSYRFTVYATD---TL 121
             DL   V Y + +   + F       G++SL++ LDYE     E S  F V A D   T+
Sbjct: 846  VDLGANVSYRIRSPEVKHFFALHPFTGELSLLRSLDYEAFPDQEASITFLVEAFDIYGTM 905

Query: 122  MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDK----GD 177
                ATV + V ++ND+ P F    Y+  +      D   G+ I  V A D D       
Sbjct: 906  PPGIATVTVIVKDMNDYPPVFSKRIYKGMV----APDAVKGTPITTVYAEDADPPGLPAS 961

Query: 178  RVTL---SLRGPY-EKMFSIN-DSGH-ISIVDLSALNTSTIQLVVVATDTGNP 224
            RV      ++ PY   +F +  DSG  I+ V+L+   T+  +LVVVA D G P
Sbjct: 962  RVRYRVDDVQFPYPASIFEVEEDSGRVITRVNLNEEPTTIFKLVVVAFDDGEP 1014



 Score = 46.2 bits (108), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 56/119 (47%), Gaps = 8/119 (6%)

Query: 76  RVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDTLMT---TSATVNISV 132
           +V Y L N +   F I+  G I     L+ E  D Y   V ATD  +    ++ T+ I V
Sbjct: 751 QVHYSLGN-FNNLFRITSNGSIYTAVKLNREVRDYYELVVVATDGAVHPRHSTLTLAIKV 809

Query: 133 VNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMF 191
           ++++D  P F    Y + +      +L  G+ I ++EA D D G  V+  +R P  K F
Sbjct: 810 LDIDDNSPVFTNSTYTVLVEE----NLPAGTTILQIEAKDVDLGANVSYRIRSPEVKHF 864


>gi|311271345|ref|XP_001925718.2| PREDICTED: cadherin-23 [Sus scrofa]
          Length = 3354

 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 59/195 (30%), Positives = 92/195 (47%), Gaps = 20/195 (10%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWLSNDYGERFSIS-RQGDISLM 100
            F +  Y  +  E++PV+ V+LTVT           ++Y L +  G +F+I+   GDI ++
Sbjct: 2402 FDQLSYQEAVFEDVPVDTVILTVTATDADSGNFALIEYSLVDGEG-KFAINPTTGDIYVL 2460

Query: 101  QCLDYETEDSYRFTVYATDT-------LMTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
              LD E +D Y  T  A D            S  V I V++VND  P+F  PQ+   +  
Sbjct: 2461 SPLDREKKDHYILTALAKDNPGDIASNRRENSVQVVIQVLDVNDCRPQFSKPQFSTSV-- 2518

Query: 154  IPLADLTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSIN-DSGHISIVDLSALNTS 210
                +   G+ +  + A D D+G    +  SL GP  + F ++ DSG ++       +  
Sbjct: 2519 --YENEPAGTSVITMMATDQDEGSNGELAYSLEGPGVEAFHVDMDSGLVT-TKRPLQSYE 2575

Query: 211  TIQLVVVATDTGNPP 225
               L VVATD+G PP
Sbjct: 2576 RFNLTVVATDSGEPP 2590



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 69/218 (31%), Positives = 101/218 (46%), Gaps = 44/218 (20%)

Query: 45  FSKNEYSVSALENLPVNY-VLLTVTTNKPRDLRVKYWLSNDYGE-----------RFSI- 91
           FSK  Y VS +EN+     VL    T+  R        S +YG+           +F I 
Sbjct: 671 FSKPAYFVSVVENIMAGATVLFLNATDLDR--------SREYGQESIIYSLEGSSQFRIN 722

Query: 92  SRQGDISLMQCLDYETEDSYRFTVYATD-----TLMTTSATVNISVVNVNDWDPRFRYPQ 146
           +R G+I+    LD ET+  Y   V A D        T  ATVNI+++++ND  P ++   
Sbjct: 723 ARSGEITTTSLLDRETKSEYILIVRAVDGGVGHNQKTGIATVNITLLDINDNHPTWKDAP 782

Query: 147 YELFLPHIPLADLT-PGSVIGKVEAADGDKGDRVTL--SLRGPYEKMFSINDS-GHIS-- 200
           Y     +I L ++T P S +  V A D D G+  TL  S++ P  K +S+N S G I   
Sbjct: 783 Y-----YINLVEMTPPDSDVTTVVALDPDLGENGTLVYSIQPP-NKFYSLNSSTGKIRTT 836

Query: 201 --IVDLSALNTSTIQL----VVVATDTGNPPRQASVPA 232
             ++D    +    +L    VV  TD G PP +A+  A
Sbjct: 837 HVMLDRENPDPDEAELMRKIVVSVTDCGTPPLRATSSA 874



 Score = 51.2 bits (121), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 63/207 (30%), Positives = 97/207 (46%), Gaps = 30/207 (14%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRDL----RVKYWLSNDYGERFSISRQ-GDISL 99
           FS+  Y+VS  EN+ V   +LTV      D+     V Y+ S+D  +RFS+ +  G I L
Sbjct: 460 FSQPLYNVSLYENVTVGTSVLTVLATD-SDVGTFGEVNYFFSDD-PDRFSLDKDTGLIML 517

Query: 100 MQCLDYETEDSYRFTVYATDTL-MTTSATVNISVVNVNDWDPRFRYPQYELFL----PHI 154
           +  LDYE    +  TV A D     T+  V I+V++VND  P F+   Y   L    P +
Sbjct: 518 IARLDYELIQRFTLTVIARDGGGEETTGRVRINVLDVNDNVPTFQKDAYVGALRENEPSV 577

Query: 155 PLADLTPGSVIGKVEAADGDK--GDRVTLSL-----RGPYEKMFSINDSGHISI---VDL 204
                   + + ++ A D D    +++T S+      G Y  +      G IS+   +D 
Sbjct: 578 --------TQLVRLRATDEDSPPNNQITYSIVSASAFGSYFDISVYEGYGVISVSRPLDY 629

Query: 205 SALNTSTIQLVVVATDTGNPPRQASVP 231
             +    I L V+A D G+PP  ++VP
Sbjct: 630 EQIPNGLIYLTVMAKDAGHPPLNSTVP 656



 Score = 44.7 bits (104), Expect = 0.075,   Method: Compositional matrix adjust.
 Identities = 59/202 (29%), Positives = 86/202 (42%), Gaps = 21/202 (10%)

Query: 43   LQFSKNEYSVSALENLPVNYVLLTVTTNKPRDL-----RVKYWLSNDYGERFSI-SRQGD 96
            +QFS   Y  +  ENL +   ++ V      +L     R   + S      F I +  G 
Sbjct: 1311 VQFSNASYEAAIWENLALGTEIVRVQAYSIDNLNQITYRFDAYTSAQAKALFKIDAVTGV 1370

Query: 97   ISLMQCLDYETEDSYRFTVYATDTLMTTSATVN--ISVVNVNDWDPRFRYPQYELFLPHI 154
            I++   +D E  D Y  TV A D      +TV   I+V++ ND  PRF +         +
Sbjct: 1371 ITVKGLVDREKGDFYTLTVVADDGGPKVDSTVKVYITVLDENDNSPRFDFTSDSAV--SV 1428

Query: 155  PLADLTPGSVIGKVEAADGDKGD--RVTLSLR-----GPYEKMFSINDS-GHISIVD-LS 205
            P  D   G  +  V+A D D G   +V  SL      G +E + + NDS G + +   L 
Sbjct: 1429 P-EDCPVGQRVATVKARDPDAGSNGQVVFSLASGNIAGAFE-IITTNDSVGEVFVARPLD 1486

Query: 206  ALNTSTIQLVVVATDTGNPPRQ 227
                    L VVA+D G PPR+
Sbjct: 1487 REERDHYILKVVASDRGTPPRK 1508



 Score = 44.3 bits (103), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 63/235 (26%), Positives = 105/235 (44%), Gaps = 45/235 (19%)

Query: 65   LTVTTNKPRDLRVKYWLS---NDYG---------------ERFSIS-RQGDISLMQCLDY 105
            ++V+ + PR+ RV  WL+   +D G                +FSI  R   +  +  LD 
Sbjct: 1002 VSVSEDVPREFRV-VWLNCTDHDVGLNAELSYFITGGNVDGKFSIGYRDATVRTVVSLDR 1060

Query: 106  ETEDSYRFTVYATDT-----LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLT 160
            ET  SY   + A D        T +ATV ++V++VND  P F    YE  +P     D+ 
Sbjct: 1061 ETTASYTLVLEAIDNGPVGKRRTGTATVFVTVLDVNDNRPIFLQSSYEASVPE----DIP 1116

Query: 161  PGSVIGKVEAADGDKGD--RVTLS-LRGPYEKMFSINDSGHISIVDLSALN---TSTIQL 214
             G  I +++A D D+G+  RV    L G     F I+ S  + +     L+    S+  L
Sbjct: 1117 EGHSIVQLKATDADEGEFGRVWYRILHGNQGNNFRIHVSNGLLMRGPRPLDRERNSSHVL 1176

Query: 215  VVVATDTGNPPRQASVPAIMHFPE------AIVQQASSKLN----SGTSSTVLII 259
            +V A +    P ++SV  I++  +         QQ  S+L     +G  ++V+++
Sbjct: 1177 IVEAYNHDLGPMRSSVRVIVYVEDVNDEAPVFTQQQYSRLGLRETAGIGTSVIVV 1231



 Score = 42.7 bits (99), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 54/199 (27%), Positives = 89/199 (44%), Gaps = 26/199 (13%)

Query: 44  QFSKNEYSVSALENLPVNYVL--LTVTTNKPRDLRV----KYWLSNDYGERF-----SIS 92
           +F+ +EYSV+  E   V + L       +K  +L +    + +L  +    F     S+ 
Sbjct: 347 EFNSSEYSVAITELAQVGFALPLFIQVMDKDENLGLNSMFEVYLVGNNSHHFIISPTSVQ 406

Query: 93  RQGDISLMQC--LDYETEDSYRFTVYATDTL--MTTSATVNISVVNVNDWDPRFRYPQYE 148
            + DI +     LDYET D Y F ++A +++      A V I+++N ND  P F  P Y 
Sbjct: 407 GKADIRIRVAIPLDYETVDRYDFDLFANESVPDHVGYAKVKITLINENDNRPIFSQPLYN 466

Query: 149 LFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDSGHISIVDLSA 206
           + L      ++T G+ +  V A D D G    V        ++     D+G I ++  + 
Sbjct: 467 VSL----YENVTVGTSVLTVLATDSDVGTFGEVNYFFSDDPDRFSLDKDTGLIMLI--AR 520

Query: 207 LNTSTIQ---LVVVATDTG 222
           L+   IQ   L V+A D G
Sbjct: 521 LDYELIQRFTLTVIARDGG 539



 Score = 40.8 bits (94), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 68/283 (24%), Positives = 120/283 (42%), Gaps = 55/283 (19%)

Query: 4    EDDFL-QPITLVVRA----IQYDNQDRYALATLIVSK-----AGTS-----LRELQFSKN 48
            +D FL  PIT V+R     I  + Q+ Y L  +   +     +GT+     + ++  S+ 
Sbjct: 2113 QDRFLIHPITGVIRVSNATIDREEQESYRLTVVATDRGTVPLSGTAVITVLIDDINDSRP 2172

Query: 49   EY-----SVSALENLPVNYVLLTVTTNKPRDL--RVKYW------------LSNDYGERF 89
            E+     +VS LE+     V+  VT    RDL  +++Y             L  D  + F
Sbjct: 2173 EFLNPIQTVSVLESAEPGTVIANVTAID-RDLNPKLEYHIIGIVAKDDTDRLVPDQEDAF 2231

Query: 90   SIS-RQGDISLMQCLDYETEDSYRFTVYATD--------TLMTTSATVNISVVNVNDWDP 140
            +++   G + +   L+ E   +Y  T+   D        ++   +A + +++++VND  P
Sbjct: 2232 AVNINTGSVMVKSPLNRELVATYEVTLSVIDNASDLPERSVSVPNAKLTVNILDVNDNTP 2291

Query: 141  RFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG-----DRVTLSLRGPYEKMFSIND 195
            +F+      +   I L   TPG+ +  V A D DKG         L L  P       + 
Sbjct: 2292 QFKPFGITYYTERI-LEGATPGTTLIAVAAVDPDKGLNGLITYTLLDLMPPGYVQLEDSS 2350

Query: 196  SGHI---SIVDLSALNTSTIQLVVVATDTGNPPRQASVPAIMH 235
            +G +     VD   ++   +   V A+D G+PPR A +P  + 
Sbjct: 2351 AGKVIANRTVDYEEVHW--LNFTVRASDNGSPPRAAEIPVYLE 2391



 Score = 39.7 bits (91), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 58/203 (28%), Positives = 87/203 (42%), Gaps = 22/203 (10%)

Query: 31  LIVSKAGTSLRELQFSKNEYSVSAL---ENLPVNYVLLTVTTNKPRDLR---VKYWLSND 84
           +++S     +  L F  N +  + L   E+ PV     +VT    RD+    + + +S +
Sbjct: 16  VLISGCWGQVNRLPFFTNHFFDTYLLISEDTPVGS---SVTQLLARDMDNDPLVFGVSGE 72

Query: 85  YGERFSISR--QGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRF 142
              RF       G + L Q LD ET+  +      +D     +  VNI V +VND  P F
Sbjct: 73  EASRFFAVEPDTGVVWLRQPLDRETKSEFTVEFSVSDHQGVITRKVNIQVGDVNDNAPTF 132

Query: 143 RYPQYELFLPHIPLADLTP-GSVIGKVEAADGD--KGDRVTLSLRGPYEKMFSINDSGHI 199
               Y + +P     + TP G+ I  V A D D   G  V  S + P  + F+I+ +  I
Sbjct: 133 HNQPYSVRIP-----ENTPVGTPIFIVNATDPDLGAGGSVLYSFQPP-SQFFAIDSARGI 186

Query: 200 SIV--DLSALNTSTIQLVVVATD 220
             V  +L    T   QL V ATD
Sbjct: 187 VTVTRELDYETTQAYQLTVNATD 209


>gi|426346210|ref|XP_004040777.1| PREDICTED: protocadherin Fat 1 [Gorilla gorilla gorilla]
          Length = 4495

 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 63/213 (29%), Positives = 104/213 (48%), Gaps = 18/213 (8%)

Query: 33   VSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTV-TTNKPRDL--RVKYWLSNDYG-ER 88
            V+  G +L    F +NEY V   EN P++ +++ V TT+    +   V Y + ND+  +R
Sbjct: 2480 VTVIGGNLHSPAFLQNEYEVELAENAPLHTLVMEVKTTDGDSGIYGHVTYHIVNDFAKDR 2539

Query: 89   FSISRQGDISLMQCLDYET--EDSYRFTVYATDTLMTTS-ATVNISVVNVNDWDPRFRYP 145
            F I+ +G I  ++ LD ET  E      + A D     +  TVN+ + + ND  P+FR  
Sbjct: 2540 FYINERGQIFTLEKLDRETPAEKVISVRLMAKDAGGKVAFCTVNVILTDDNDNAPQFRAT 2599

Query: 146  QYELFLPHIPLADLTPGSVIGKVEAADGDKGDR--VTLSLRGPYEKM---FSIND-SGHI 199
            +YE+ +     +    G+ + KV A+D D+G    +T ++    E +     IN  SG I
Sbjct: 2600 KYEVNIG----SSAAKGTSVIKVLASDADEGSNADITYAIEADSESVKENLEINKLSGVI 2655

Query: 200  SIVD-LSALNTSTIQLVVVATDTGNPPRQASVP 231
            +  + L  L        V A D G+P +++ VP
Sbjct: 2656 TTKESLIGLENEFFTFFVRAVDNGSPSKESVVP 2688



 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/156 (25%), Positives = 77/156 (49%), Gaps = 11/156 (7%)

Query: 33   VSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWL---SNDYGERF 89
            +SK   S   + F ++ ++ + +E+ PV +++  ++   P    +  W      +Y   F
Sbjct: 1346 ISKPKPSPEPISFEESFFTFTVMESDPVAHMIGVISVEPPG---IPLWFDITGGNYDSHF 1402

Query: 90   SISR-QGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYE 148
             + +  G I + + LD E + +Y  TV ATD   T    V I V++ ND  P+F   +YE
Sbjct: 1403 DVDKGTGTIIVAKPLDAEQKSNYNLTVEATDGTTTILTQVFIKVIDTNDHRPQFSTSKYE 1462

Query: 149  LFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR 184
            + +P     D  P + I ++ A D D+ +++  +L+
Sbjct: 1463 VIIPE----DTAPETEILQISAVDQDEKNKLIYTLQ 1494



 Score = 57.8 bits (138), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 59/244 (24%), Positives = 106/244 (43%), Gaps = 40/244 (16%)

Query: 4    EDDFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYV 63
            E++F    T  VRA+   +  + ++  + V      ++  +FS+  Y+ +  E++P+   
Sbjct: 2665 ENEFF---TFFVRAVDNGSPSKESVVPVYVKILPPEMQLPKFSEPFYTFTVSEDVPIGTE 2721

Query: 64   LLTVTTNKPRDLRVKYWLSN----DYGERFSISRQ-GDISLMQCLDYETEDSYRFTVYAT 118
            +  +       +       N    +  E F I RQ G + L + LD+ET   Y+F++ A 
Sbjct: 2722 IDLIRAEHSGTVLYSLVKGNTPESNRDESFVIDRQSGRLKLEKSLDHETTKWYQFSILAR 2781

Query: 119  ----DTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGD 174
                D  M  S  V+I V + ND  P F    YE F+    + +L  GS + ++ A+D D
Sbjct: 2782 CTQDDHEMVASVDVSIQVKDANDNSPVFESSPYEAFI----VENLPGGSRVIQIRASDAD 2837

Query: 175  KGDRVTLSLRGPYEKMFSINDSGHISIVDLSALNTST----------------IQLVVVA 218
             G    +        M+S++ S  + +++  A+N  T                 Q+ VVA
Sbjct: 2838 SGTNGQV--------MYSLDQSQSVEVIESFAINMETGWITTLKELDHEKRDNYQIKVVA 2889

Query: 219  TDTG 222
            +D G
Sbjct: 2890 SDHG 2893



 Score = 55.1 bits (131), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 58/202 (28%), Positives = 94/202 (46%), Gaps = 25/202 (12%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSN-DYGERFSIS-RQGDISLMQC 102
            F K  YS    EN+ V+  ++ V  N P  L+V Y +++ D   +F+I+   G I+++  
Sbjct: 2182 FEKPFYSAEIAENIQVHSPVVHVQANSPEGLKVFYSITDGDPFSQFTINFNTGVINVIAP 2241

Query: 103  LDYETEDSYRFTVYATDTLMTTSATVNISVV--NVNDWDPRFRYPQYELFLPHIPLADLT 160
            LD+E   +Y+ ++ ATD+L    A V + ++  ++ND  P F    Y         A L+
Sbjct: 2242 LDFEAHPAYKLSIRATDSLTGAHAEVFVDIIVEDINDNPPVFAQQSY--------AATLS 2293

Query: 161  PGSVIG----KVEAADGDKGDRVTLSLRGPYEKMFSINDSGHI--SIVDLSALNTSTIQ- 213
              SVIG    +V A D D      +S +  +E     +D  H+  S   +S L T   + 
Sbjct: 2294 EASVIGTSVVQVRATDSDSEPNRGISYQM-FENHSKSHDHFHVDSSTGLISLLRTLDYEQ 2352

Query: 214  -----LVVVATDTGNPPRQASV 230
                 + V A D G PP  + V
Sbjct: 2353 SRQHTIFVRAVDGGMPPLSSDV 2374



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 42/145 (28%), Positives = 68/145 (46%), Gaps = 8/145 (5%)

Query: 90   SISRQGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYEL 149
            +I  +  + + + LD E  D+Y  T+ ATD   ++ A V + V++ ND  P      Y  
Sbjct: 2971 NIQNEWKVYVKKPLDREKRDNYLLTITATDGTFSSKAIVEVKVLDANDNSPVCEKTLYSD 3030

Query: 150  FLPHIPLADLTPGSVIGKVEAADGD--KGDRVTLSLRGPYEKMFSIN-DSGHISI-VDLS 205
             +P     D+ PG +I ++ A D D      +T +L G   + F +N D+G +     L 
Sbjct: 3031 TIPE----DVLPGKLIMQISATDADIRSNAEITYTLLGSGAEKFKLNPDTGELKTSTPLD 3086

Query: 206  ALNTSTIQLVVVATDTGNPPRQASV 230
                +   L+V ATD G    QAS+
Sbjct: 3087 REEQAVYHLLVRATDGGGRFCQASI 3111



 Score = 48.9 bits (115), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 61/241 (25%), Positives = 103/241 (42%), Gaps = 35/241 (14%)

Query: 13   LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKP 72
            L+VRA   D   R+  A+++++    +    +FS + Y+++  EN      LLT      
Sbjct: 3095 LLVRAT--DGGGRFCQASIVLTLEDVNDNAPEFSADPYAITVFENTEPG-TLLTRVQATD 3151

Query: 73   RDLRVKYWLS-------------------NDYGERFSISRQGDISLMQCLDYETEDSYRF 113
             D  +    S                    + G  F     G + +++ LDYE+   Y  
Sbjct: 3152 ADAGISRGCSCLTLLTEILGASWENVVALQNAGSNFDF-YSGAVFIIENLDYESSHEYYL 3210

Query: 114  TVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEA 170
            TV ATD     ++  A+VNI+V ++ND  P F    Y   +    + + +  +V+   + 
Sbjct: 3211 TVEATDGGTPSLSDVASVNINVTDINDNTPVFSQDTYTTVISEDAVLEQSVITVMA--DD 3268

Query: 171  ADGDKGDRVTLS-LRGPYEKMFSIND-SGHISIVDLSALNTSTIQ---LVVVATDTGNPP 225
            ADG     +  S + G     F+I+   G + +  L  L+  TI    L V A+D G+PP
Sbjct: 3269 ADGPSNSHIHYSIIDGNQGSSFTIDPVRGEVKVTRL--LDRETISGYTLTVQASDNGSPP 3326

Query: 226  R 226
            R
Sbjct: 3327 R 3327



 Score = 43.1 bits (100), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 55/215 (25%), Positives = 91/215 (42%), Gaps = 19/215 (8%)

Query: 24  DRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLR---VKYW 80
           DR A   ++V   G +    +F++  Y  +  EN+P+   +++++   P +     V Y 
Sbjct: 442 DRKASTKVLVKVLGANSNPPEFTQTAYKAAFDENVPIGTTVMSLSAVDPDEGENGYVTYS 501

Query: 81  LSNDYGERFSISR-QGDISLMQCLDYE-TEDSYRFTVYATDTLMTTSATVN----ISVVN 134
           ++N     F+I    G +S  + LDYE     Y   + A+D  +     V     I++ N
Sbjct: 502 IANLNHVPFAIDHFTGAVSTSENLDYELMPRVYTLRIRASDWGLPYRREVEVLATITLNN 561

Query: 135 VNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYE-KMFSI 193
           +ND  P F     E  +P     DL  G  I  V A D D+   V   +    E  +FS+
Sbjct: 562 LNDNTPLFEKINCEGTIPR----DLGVGEQITTVSAIDADELQLVQYQIEAGNELDLFSL 617

Query: 194 NDSGHI-----SIVDLSALNTSTIQLVVVATDTGN 223
           N +  +     S++D      S   L + ATD  N
Sbjct: 618 NPNSGVLSLKQSLMDGLGAKVSFHSLRITATDGEN 652



 Score = 43.1 bits (100), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 56/195 (28%), Positives = 86/195 (44%), Gaps = 20/195 (10%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTTNKPRDL----RVKYWLSNDYGERFSI-SRQGDIS 98
            +F +  Y V   E+  V+  ++ V     +DL     V Y +  D  + FSI S  G + 
Sbjct: 821  EFLQESYFVEVSEDKEVHSEIIQVEATD-KDLGPNGHVTYSILTD-TDTFSIDSVTGVVK 878

Query: 99   LMQCLDYETEDSYRFTVYATDTL-----MTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
            + + LD E +  +   + A D       ++++  V +S+ +VND  P F  P Y + +  
Sbjct: 879  IARSLDRELQHEHYLKIEARDQAREEPQLSSTVVVKVSLEDVNDNPPTFIPPNYRVKV-- 936

Query: 154  IPLADLTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSIND-SGHISIV-DLSALNT 209
                DL  G+VI  +EA D D G   +V  SL    E  F ++  SG + IV  L     
Sbjct: 937  --REDLPEGTVIMWLEAHDPDLGQSGQVRYSLLDHGEGNFDVDKLSGAVRIVQQLDFEKK 994

Query: 210  STIQLVVVATDTGNP 224
                L V A D G P
Sbjct: 995  QVYNLTVRAKDKGKP 1009



 Score = 42.4 bits (98), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 54/191 (28%), Positives = 86/191 (45%), Gaps = 30/191 (15%)

Query: 56   ENLPVNYVLLTVTTNKP---RDLRVKYWLSNDYG-ERFSISRQ-GDISLMQCLDYETEDS 110
            E+ PV  +++TV+ +     RD  ++Y + +  G   F I  + G I     LD E+   
Sbjct: 1045 EDAPVGSLVMTVSAHDEDAGRDGEIRYSIRDGSGVGVFKIGEETGVIETSDRLDRESTSH 1104

Query: 111  YRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSV-IG 166
            Y  TV+ATD     +++   + I V +VND  P+   P   ++ P I   + +P  V + 
Sbjct: 1105 YWLTVFATDQGVVPLSSFIEIYIEVEDVNDNAPQTSEP---VYYPEI--MENSPKDVSVV 1159

Query: 167  KVEAADGDKGDRVTLSLRGPYEKMFSINDSGHISIVDLSALNTSTIQ-----------LV 215
            ++EA D D      L       K+ S N  G  SI   + L T+T +           L 
Sbjct: 1160 QIEAFDPDSSSNDKLMY-----KITSGNPQGFFSIHPKTGLITTTSRKLDREQQDEHILE 1214

Query: 216  VVATDTGNPPR 226
            V  TD G+PP+
Sbjct: 1215 VTVTDNGSPPK 1225



 Score = 40.0 bits (92), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 39/169 (23%), Positives = 69/169 (40%), Gaps = 23/169 (13%)

Query: 6    DFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQ---------------FSKNEY 50
            DF      ++  + Y++   Y L          SL ++                FS++ Y
Sbjct: 3188 DFYSGAVFIIENLDYESSHEYYLTVEATDGGTPSLSDVASVNINVTDINDNTPVFSQDTY 3247

Query: 51   SVSALENLPVNYVLLTVTTNK---PRDLRVKY-WLSNDYGERFSISR-QGDISLMQCLDY 105
            +    E+  +   ++TV  +    P +  + Y  +  + G  F+I   +G++ + + LD 
Sbjct: 3248 TTVISEDAVLEQSVITVMADDADGPSNSHIHYSIIDGNQGSSFTIDPVRGEVKVTRLLDR 3307

Query: 106  ETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFL 151
            ET   Y  TV A+D        + TVNI V +VND  P F    Y + +
Sbjct: 3308 ETISGYTLTVQASDNGSPPRVNTTTVNIDVSDVNDNAPVFSRGNYSVII 3356



 Score = 38.1 bits (87), Expect = 7.3,   Method: Compositional matrix adjust.
 Identities = 42/162 (25%), Positives = 72/162 (44%), Gaps = 14/162 (8%)

Query: 45   FSKNEYSVSALENLPVNY-VLLTVTTNKPRDLRVKYWL-----SNDYGERFSISRQGDIS 98
            FS+  YSV   EN PV + VL  V T++        +       ND  + F ++ QG + 
Sbjct: 3347 FSRGNYSVIIQENKPVGFSVLQLVVTDEDSSHNGPPFFFTIVTGNDE-KAFEVNPQGVLL 3405

Query: 99   LMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIP 155
                +  + +D Y   V   D     +++   ++I V+  + + P       E+F+    
Sbjct: 3406 TSSAIKRKEKDHYLLQVKVADNGKPQLSSLTYIDIRVIEESIYPPAIL--PLEIFI--TA 3461

Query: 156  LADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSG 197
              +   G VIGK+ A D D  D +T SL    + +FS++ +G
Sbjct: 3462 SGEEYSGGVIGKIHATDQDVYDTLTYSLDPQMDNLFSVSSTG 3503


>gi|194591877|gb|ACF76478.1| protocadherin-15-CD3 isoform 1 [Homo sapiens]
          Length = 1675

 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 61/195 (31%), Positives = 100/195 (51%), Gaps = 14/195 (7%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGER-FSISRQ-GDISLMQ 101
           +F +  YS+   E + V  VLL +         + Y + N   +R F++S   G ++L +
Sbjct: 615 RFPQLMYSLEISEAMRVGAVLLNLQATDREGDSITYAIENGDPQRVFNLSETTGILTLGK 674

Query: 102 CLDYETEDSYRFTVYATDTL--MTTSATVNISVVNVNDWDPRFRYPQYELFLP-HIPLAD 158
            LD E+ D Y   + A+D     T++ATVNI V +VND  P F     + +LP ++ + +
Sbjct: 675 ALDRESTDRYILIITASDGRPDGTSTATVNIVVTDVNDNAPVF-----DPYLPRNLSVVE 729

Query: 159 LTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDSGHI-SIVDLSALNTSTIQLV 215
               + +G+V+A D D G   +V  SL G +  +F I  +G I + V L+       +LV
Sbjct: 730 EEANAFVGQVKATDPDAGINGQVHYSL-GNFNNLFRITSNGSIYTAVKLNREVRDYYELV 788

Query: 216 VVATDTGNPPRQASV 230
           VVATD    PR +++
Sbjct: 789 VVATDGAVHPRHSTL 803



 Score = 55.1 bits (131), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 62/241 (25%), Positives = 105/241 (43%), Gaps = 27/241 (11%)

Query: 6   DFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVN---- 61
           DF Q   LV++A Q +     A A L +     + +   F+   Y    LE+ PV     
Sbjct: 356 DFHQKFDLVIKAEQDNGHPLPAFAGLHIEILDENNQSPYFTMPSYQGYILESAPVGATIS 415

Query: 62  ----------YVLLTVTTNKPRDLRVKYWLSNDYGERFSISRQG---DISLMQCLDYETE 108
                      V L       +D  +  +L NDY   F++++ G    ++L+Q +D E +
Sbjct: 416 DSLNLTSPLRIVALDKDIEDTKDPELHLFL-NDYTSVFTVTQTGITRYLTLLQPVDREEQ 474

Query: 109 DSYRFTVYATDTLMTTSAT-VNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGK 167
            +Y F++ A D +  +    VNI V++ ND  P F    Y++++      D+ PG  + +
Sbjct: 475 QTYTFSITAFDGVQESEPVIVNIQVMDANDNTPTFPEISYDVYV----YTDMRPGDSVIQ 530

Query: 168 VEAADGDKGD--RVTLSLRGPYEKMFSIND-SGHISIV-DLSALNTSTIQLVVVATDTGN 223
           + A D D+G    +T  +    +  F IN  +G I+I   +  +   T  L V A D   
Sbjct: 531 LTAVDADEGSNGEITYEILVGAQGDFIINKTTGLITIAPGVEMIVGRTYALTVQAADNAP 590

Query: 224 P 224
           P
Sbjct: 591 P 591



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 71/233 (30%), Positives = 103/233 (44%), Gaps = 26/233 (11%)

Query: 13   LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKP 72
            LVV A       R++  TL +           F+ + Y+V   ENLP    +L +   K 
Sbjct: 787  LVVVATDGAVHPRHSTLTLAIKVLDIDDNSPVFTNSTYTVLVEENLPAGTTILQIEA-KD 845

Query: 73   RDL--RVKYWLSNDYGERFSISR--QGDISLMQCLDYET----EDSYRFTVYATD---TL 121
             DL   V Y + +   + F       G++SL++ LDYE     E S  F V A D   T+
Sbjct: 846  VDLGANVSYRIRSPEVKHFFALHPFTGELSLLRSLDYEAFPDQEASITFLVEAFDIYGTM 905

Query: 122  MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDK----GD 177
                ATV + V ++ND+ P F    Y+  +      D   G+ I  V A D D       
Sbjct: 906  PPGIATVTVIVKDMNDYPPVFSKRIYKGMV----APDAVKGTPITTVYAEDADPPGLPAS 961

Query: 178  RVTL---SLRGPY-EKMFSIN-DSGH-ISIVDLSALNTSTIQLVVVATDTGNP 224
            RV      ++ PY   +F +  DSG  I+ V+L+   T+  +LVVVA D G P
Sbjct: 962  RVRYRVDDVQFPYPASIFEVEEDSGRVITRVNLNEEPTTIFKLVVVAFDDGEP 1014



 Score = 46.2 bits (108), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 56/119 (47%), Gaps = 8/119 (6%)

Query: 76  RVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDTLMT---TSATVNISV 132
           +V Y L N +   F I+  G I     L+ E  D Y   V ATD  +    ++ T+ I V
Sbjct: 751 QVHYSLGN-FNNLFRITSNGSIYTAVKLNREVRDYYELVVVATDGAVHPRHSTLTLAIKV 809

Query: 133 VNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMF 191
           ++++D  P F    Y + +      +L  G+ I ++EA D D G  V+  +R P  K F
Sbjct: 810 LDIDDNSPVFTNSTYTVLVEE----NLPAGTTILQIEAKDVDLGANVSYRIRSPEVKHF 864


>gi|47551325|ref|NP_999974.1| cadherin-23 precursor [Danio rerio]
 gi|46452161|gb|AAS98176.1| cadherin 23 [Danio rerio]
          Length = 3366

 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 60/195 (30%), Positives = 98/195 (50%), Gaps = 20/195 (10%)

Query: 45   FSKNEYSVSALENLPVNYVLLTV-TTNKPRDLR--VKYWLSNDYGERFSIS-RQGDISLM 100
            F +  Y  S  E++ +  ++++V  T+    L   ++Y L +  G +F I+   GDI ++
Sbjct: 2405 FQQPLYQKSIFEDVALGTIIVSVRATDADSGLFSVIEYGLVDGEG-KFGITPTTGDIYIL 2463

Query: 101  QCLDYETEDSYRFTVYATD-------TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
              LD ET+D Y  T YA D            S  V ++V++VND+ PRF      +F   
Sbjct: 2464 SALDRETKDRYTLTAYARDNPGGSPNNRRENSVQVQLTVLDVNDFRPRF---SERVFTTS 2520

Query: 154  IPLADLTPGSVIGKVEAADGDKGDR--VTLSLRGPYEKMFSIN-DSGHISIVDLSALNTS 210
            +   +   G+ +  ++A D D+G+   +T SL+GP    FS++ D+G I  + L   +  
Sbjct: 2521 V-FENEPVGTSVITMKATDLDEGENALLTYSLQGPGADAFSLDPDTGLIRSLRL-LQSFE 2578

Query: 211  TIQLVVVATDTGNPP 225
               L VVATD G PP
Sbjct: 2579 RFNLTVVATDQGRPP 2593



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 60/205 (29%), Positives = 99/205 (48%), Gaps = 22/205 (10%)

Query: 15   VRAIQYDNQD--RYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNY--VLLTVTTN 70
            +R I YD     R + +TL ++    +     F  + Y+VS  E++P +Y  V L  T N
Sbjct: 967  LRIIAYDAGQFPRTSTSTLTITVLDVNDETPTFFPSVYNVSLEESVPRDYLVVRLNCTDN 1026

Query: 71   KPR-DLRVKYWL-SNDYGERFSIS-RQGDISLMQCLDYETEDSYRFTVYATDT-----LM 122
                +  + Y++ + +   +FS+  R G +  +  LD ET+ SYR  + A D        
Sbjct: 1027 DAGLNAELSYFITAGNQDGKFSVGFRTGVVRTVVGLDRETQASYRLVIEAIDNGPAGGRR 1086

Query: 123  TTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS 182
            T +ATV + V++VND  P F    YE  +    L ++  G+ I +V+A D D+G+   + 
Sbjct: 1087 TGTATVYVEVLDVNDNRPIFLQNSYETSV----LENIPRGTSILQVQATDADQGENGKVL 1142

Query: 183  LRGPYEKMFSINDSGHISIVDLSAL 207
             R     + S N+ G  S+  LS L
Sbjct: 1143 YR-----ILSGNN-GQFSMDSLSGL 1161



 Score = 47.8 bits (112), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 44/146 (30%), Positives = 70/146 (47%), Gaps = 17/146 (11%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRV----KYWLSNDYGERFSIS-----RQ 94
           +F+ +EY V   E   V + L      + +D  V    + +L+ +  + FSIS      +
Sbjct: 353 RFNSSEYRVLITELAQVGFALPLYIQVEDKDEGVNSMFQVFLTGNNSDHFSISPTSVQGR 412

Query: 95  GDISLMQC--LDYETEDSYRFTVYATDTL--MTTSATVNISVVNVNDWDPRFRYPQYELF 150
            D+ L     LDYET  SY F++YA ++L      A V I ++N ND  P F    Y + 
Sbjct: 413 ADLRLRVAIPLDYETIRSYSFSLYANESLSEHVGFARVFIDLINENDNRPIFSQTLYNIS 472

Query: 151 LPHIPLADLTPGSVIGKVEAADGDKG 176
           LP      + PG+ + +++A D D G
Sbjct: 473 LPE----SIEPGASLLQIKATDNDIG 494



 Score = 47.0 bits (110), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 46/156 (29%), Positives = 76/156 (48%), Gaps = 19/156 (12%)

Query: 92  SRQGDISLMQCLDYETEDSYRFTVYATDTLM-----TTSATVNISVVNVNDWDPRFRYPQ 146
           +R G+I+    LD E +  Y   V A D  +     T  ATVNI+V+++ND  P +R   
Sbjct: 727 TRSGEITTTALLDREMKSEYILIVRAVDGGVGPQQKTGIATVNITVLDINDNAPVWRDEP 786

Query: 147 YELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSIN-DSGHI----S 200
           Y+  +  +   D    + +  V A D D GD  T+     P    ++IN ++G I    +
Sbjct: 787 YQANVVEMSPID----TDVITVFAVDPDYGDNGTVVYSINPENPFYTINRNTGKIRTSGA 842

Query: 201 IVDLSALNTSTIQL----VVVATDTGNPPRQASVPA 232
           ++D  + +  + QL    ++ ATD G PP ++S  A
Sbjct: 843 VLDRESQDARSAQLMRTIIISATDRGTPPLRSSASA 878



 Score = 44.7 bits (104), Expect = 0.075,   Method: Compositional matrix adjust.
 Identities = 40/140 (28%), Positives = 65/140 (46%), Gaps = 13/140 (9%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDY---GERFSI-SRQGDISLM 100
           F    Y++   EN PV   +  V    P D  V   +   +    + FSI   +G +++ 
Sbjct: 138 FYNQPYAIQIPENTPVGTSVFMVNATDP-DQGVGGSVLFSFQPPSQFFSIDGARGIVTVT 196

Query: 101 QCLDYETEDSYRFTVYATDT----LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
           + LDYET  +Y+ TV ATD      +++ A + I++ ++ D DP F    Y   +    +
Sbjct: 197 RALDYETTIAYQLTVNATDQDKRRPLSSLANLAITITDIQDMDPIFTNLPYSTNI----M 252

Query: 157 ADLTPGSVIGKVEAADGDKG 176
            D  PG  + K+ A D D G
Sbjct: 253 EDAPPGYEVRKIRAIDQDLG 272



 Score = 44.3 bits (103), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 54/206 (26%), Positives = 94/206 (45%), Gaps = 18/206 (8%)

Query: 45  FSKNEYSVSALENLPVNYVLLTV--TTNKPRDLRVKYWLSNDYGERFSISRQ-GDISLMQ 101
           FS+  Y++S  E++     LL +  T N      V  +  +D  ++FS+  + G ++L  
Sbjct: 464 FSQTLYNISLPESIEPGASLLQIKATDNDIGTFGVVRYYFSDEPDQFSLDAETGWVTLRG 523

Query: 102 CLDYETEDSYRFTVYATDTL-MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLT 160
            LDYE    +  T+ A D     T+  + I+V++VND  P F   Q E +   +   +  
Sbjct: 524 RLDYELMRRFTLTILARDGGGEETTGRLRINVMDVNDNAPVF---QKEAYTGSLMENEQA 580

Query: 161 PGSVIGKVEAADGDK--GDRVTLSL--RGPYEKMFSINDSGHISIV------DLSALNTS 210
           P  VI +  A D D    + +T S+     +   FSI+ +   +++      D   +   
Sbjct: 581 PQQVI-RARATDEDSPPNNILTYSIIYASQFRSFFSISIAEGYAVITVTRPLDYEQVPGG 639

Query: 211 TIQLVVVATDTGNPPRQASVPAIMHF 236
            I L ++A D GNP   ++VP I+  
Sbjct: 640 LIFLTLMAKDGGNPSLNSTVPVIIEL 665



 Score = 39.3 bits (90), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 42/131 (32%), Positives = 61/131 (46%), Gaps = 11/131 (8%)

Query: 95  GDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHI 154
           G + L Q LD E +   +     +D+      TVNI + +VND  P F    Y + +P  
Sbjct: 91  GVVWLRQPLDREAKSEMQVEFTVSDSQGVVKDTVNIQIGDVNDNAPSFYNQPYAIQIP-- 148

Query: 155 PLADLTP-GSVIGKVEAADGDK--GDRVTLSLRGPYEKMFSINDSGHISIVDLSALNTST 211
              + TP G+ +  V A D D+  G  V  S + P  + FSI+ +  I  V  +    +T
Sbjct: 149 ---ENTPVGTSVFMVNATDPDQGVGGSVLFSFQPP-SQFFSIDGARGIVTVTRALDYETT 204

Query: 212 I--QLVVVATD 220
           I  QL V ATD
Sbjct: 205 IAYQLTVNATD 215



 Score = 38.1 bits (87), Expect = 8.0,   Method: Compositional matrix adjust.
 Identities = 56/200 (28%), Positives = 85/200 (42%), Gaps = 26/200 (13%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKP-----RDLRVK----YWLSNDYGERFSI-SRQ 94
            FS++ Y     EN P    +L +  N P     +D+ V     Y L     + FSI SR 
Sbjct: 1962 FSQSSYRGEISENSPTGTTVLIL--NGPVLAEDKDIGVNAVVSYGLLGTRVDIFSIDSRT 2019

Query: 95   GDISLM--QCLDYETEDSYR---FTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYEL 149
            G +S+     LD E     R   F V      + +S  + I++++VND  P F    + +
Sbjct: 2020 GVVSVRGGAVLDREAFSVPRVELFLVSVDVGGLNSSVPLTITILDVNDNPPVFNPSSFTV 2079

Query: 150  FLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR---GPYEKMFSINDSGHISI--VDL 204
             LP     +   G V+ ++ A D D G    L  R   G  ++      SG + +    L
Sbjct: 2080 RLPE----NSPTGVVVTQLSATDADAGSNGWLQYRLDSGAQDRFIVDALSGAVLVGNATL 2135

Query: 205  SALNTSTIQLVVVATDTGNP 224
                 S+ +LVV+ATD G P
Sbjct: 2136 DREERSSYRLVVIATDRGTP 2155


>gi|194591873|gb|ACF76476.1| protocadherin-15-CD2 isoform 1 [Homo sapiens]
          Length = 1783

 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 61/195 (31%), Positives = 100/195 (51%), Gaps = 14/195 (7%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGER-FSISRQ-GDISLMQ 101
           +F +  YS+   E + V  VLL +         + Y + N   +R F++S   G ++L +
Sbjct: 622 RFPQLMYSLEISEAMRVGAVLLNLQATDREGDSITYAIENGDPQRVFNLSETTGILTLGK 681

Query: 102 CLDYETEDSYRFTVYATDTL--MTTSATVNISVVNVNDWDPRFRYPQYELFLP-HIPLAD 158
            LD E+ D Y   + A+D     T++ATVNI V +VND  P F     + +LP ++ + +
Sbjct: 682 ALDRESTDRYILIITASDGRPDGTSTATVNIVVTDVNDNAPVF-----DPYLPRNLSVVE 736

Query: 159 LTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDSGHI-SIVDLSALNTSTIQLV 215
               + +G+V+A D D G   +V  SL G +  +F I  +G I + V L+       +LV
Sbjct: 737 EEANAFVGQVKATDPDAGINGQVHYSL-GNFNNLFRITSNGSIYTAVKLNREVRDYYELV 795

Query: 216 VVATDTGNPPRQASV 230
           VVATD    PR +++
Sbjct: 796 VVATDGAVHPRHSTL 810



 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 63/247 (25%), Positives = 106/247 (42%), Gaps = 32/247 (12%)

Query: 6   DFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYV-- 63
           DF Q   LV++A Q +     A A L +     + +   F+   Y    LE+ PV     
Sbjct: 356 DFHQKFDLVIKAEQDNGHPLPAFAGLHIEILDENNQSPYFTMPSYQGYILESAPVGATIS 415

Query: 64  --------LLTVTTNK------PRDLRVK----YWLSNDYGERFSISRQG---DISLMQC 102
                   L  V  +K      P  +  K    +   NDY   F++++ G    ++L+Q 
Sbjct: 416 DSLNLTSPLRIVALDKDIEDVPPSGVPTKDPELHLFLNDYTSVFTVTQTGITRYLTLLQP 475

Query: 103 LDYETEDSYRFTVYATDTLMTTSAT-VNISVVNVNDWDPRFRYPQYELFLPHIPLADLTP 161
           +D E + +Y F++ A D +  +    VNI V++ ND  P F    Y++++      D+ P
Sbjct: 476 VDREEQQTYTFSITAFDGVQESEPVIVNIQVMDANDNTPTFPEISYDVYV----YTDMRP 531

Query: 162 GSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSIND-SGHISIV-DLSALNTSTIQLVVV 217
           G  + ++ A D D+G    +T  +    +  F IN  +G I+I   +  +   T  L V 
Sbjct: 532 GDSVIQLTAVDADEGSNGEITYEILVGAQGDFIINKTTGLITIAPGVEMIVGRTYALTVQ 591

Query: 218 ATDTGNP 224
           A D   P
Sbjct: 592 AADNAPP 598



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 71/233 (30%), Positives = 103/233 (44%), Gaps = 26/233 (11%)

Query: 13   LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKP 72
            LVV A       R++  TL +           F+ + Y+V   ENLP    +L +   K 
Sbjct: 794  LVVVATDGAVHPRHSTLTLAIKVLDIDDNSPVFTNSTYTVLVEENLPAGTTILQIEA-KD 852

Query: 73   RDL--RVKYWLSNDYGERFSISR--QGDISLMQCLDYET----EDSYRFTVYATD---TL 121
             DL   V Y + +   + F       G++SL++ LDYE     E S  F V A D   T+
Sbjct: 853  VDLGANVSYRIRSPEVKHFFALHPFTGELSLLRSLDYEAFPDQEASITFLVEAFDIYGTM 912

Query: 122  MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDK----GD 177
                ATV + V ++ND+ P F    Y+  +      D   G+ I  V A D D       
Sbjct: 913  PPGIATVTVIVKDMNDYPPVFSKRIYKGMV----APDAVKGTPITTVYAEDADPPGLPAS 968

Query: 178  RVTL---SLRGPY-EKMFSIN-DSGH-ISIVDLSALNTSTIQLVVVATDTGNP 224
            RV      ++ PY   +F +  DSG  I+ V+L+   T+  +LVVVA D G P
Sbjct: 969  RVRYRVDDVQFPYPASIFEVEEDSGRVITRVNLNEEPTTIFKLVVVAFDDGEP 1021



 Score = 45.8 bits (107), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 56/119 (47%), Gaps = 8/119 (6%)

Query: 76  RVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDTLMT---TSATVNISV 132
           +V Y L N +   F I+  G I     L+ E  D Y   V ATD  +    ++ T+ I V
Sbjct: 758 QVHYSLGN-FNNLFRITSNGSIYTAVKLNREVRDYYELVVVATDGAVHPRHSTLTLAIKV 816

Query: 133 VNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMF 191
           ++++D  P F    Y + +      +L  G+ I ++EA D D G  V+  +R P  K F
Sbjct: 817 LDIDDNSPVFTNSTYTVLVEE----NLPAGTTILQIEAKDVDLGANVSYRIRSPEVKHF 871


>gi|119574536|gb|EAW54151.1| protocadherin 15, isoform CRA_a [Homo sapiens]
          Length = 1401

 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 61/195 (31%), Positives = 100/195 (51%), Gaps = 14/195 (7%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGER-FSISRQ-GDISLMQ 101
           +F +  YS+   E + V  VLL +         + Y + N   +R F++S   G ++L +
Sbjct: 615 RFPQLMYSLEISEAMRVGAVLLNLQATDREGDSITYAIENGDPQRVFNLSETTGILTLGK 674

Query: 102 CLDYETEDSYRFTVYATDTL--MTTSATVNISVVNVNDWDPRFRYPQYELFLP-HIPLAD 158
            LD E+ D Y   + A+D     T++ATVNI V +VND  P F     + +LP ++ + +
Sbjct: 675 ALDRESTDRYILIITASDGRPDGTSTATVNIVVTDVNDNAPVF-----DPYLPRNLSVVE 729

Query: 159 LTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDSGHI-SIVDLSALNTSTIQLV 215
               + +G+V+A D D G   +V  SL G +  +F I  +G I + V L+       +LV
Sbjct: 730 EEANAFVGQVKATDPDAGINGQVHYSL-GNFNNLFRITSNGSIYTAVKLNREVRDYYELV 788

Query: 216 VVATDTGNPPRQASV 230
           VVATD    PR +++
Sbjct: 789 VVATDGAVHPRHSTL 803



 Score = 55.1 bits (131), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 62/241 (25%), Positives = 105/241 (43%), Gaps = 27/241 (11%)

Query: 6   DFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVN---- 61
           DF Q   LV++A Q +     A A L +     + +   F+   Y    LE+ PV     
Sbjct: 356 DFHQKFDLVIKAEQDNGHPLPAFAGLHIEILDENNQSPYFTMPSYQGYILESAPVGATIS 415

Query: 62  ----------YVLLTVTTNKPRDLRVKYWLSNDYGERFSISRQG---DISLMQCLDYETE 108
                      V L       +D  +  +L NDY   F++++ G    ++L+Q +D E +
Sbjct: 416 DSLNLTSPLRIVALDKDIEDTKDPELHLFL-NDYTSVFTVTQTGITRYLTLLQPVDREEQ 474

Query: 109 DSYRFTVYATDTLMTTS-ATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGK 167
            +Y F++ A D +  +    VNI V++ ND  P F    Y++++      D+ PG  + +
Sbjct: 475 QTYTFSITAFDGVQESEPVIVNIQVMDANDNTPTFPEISYDVYV----YTDMRPGDSVIQ 530

Query: 168 VEAADGDKGD--RVTLSLRGPYEKMFSIND-SGHISIV-DLSALNTSTIQLVVVATDTGN 223
           + A D D+G    +T  +    +  F IN  +G I+I   +  +   T  L V A D   
Sbjct: 531 LTAVDADEGSNGEITYEILVGAQGDFIINKTTGLITIAPGVEMIVGRTYALTVQAADNAP 590

Query: 224 P 224
           P
Sbjct: 591 P 591



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 71/233 (30%), Positives = 103/233 (44%), Gaps = 26/233 (11%)

Query: 13   LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKP 72
            LVV A       R++  TL +           F+ + Y+V   ENLP    +L +   K 
Sbjct: 787  LVVVATDGAVHPRHSTLTLAIKVLDIDDNSPVFTNSTYTVLVEENLPAGTTILQIEA-KD 845

Query: 73   RDL--RVKYWLSNDYGERFSISR--QGDISLMQCLDYET----EDSYRFTVYATD---TL 121
             DL   V Y + +   + F       G++SL++ LDYE     E S  F V A D   T+
Sbjct: 846  VDLGANVSYRIRSPEVKHFFALHPFTGELSLLRSLDYEAFPDQEASITFLVEAFDIYGTM 905

Query: 122  MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDK----GD 177
                ATV + V ++ND+ P F    Y+  +      D   G+ I  V A D D       
Sbjct: 906  PPGIATVTVIVKDMNDYPPVFSKRIYKGMV----APDAVKGTPITTVYAEDADPPGLPAS 961

Query: 178  RVTL---SLRGPY-EKMFSIN-DSGH-ISIVDLSALNTSTIQLVVVATDTGNP 224
            RV      ++ PY   +F +  DSG  I+ V+L+   T+  +LVVVA D G P
Sbjct: 962  RVRYRVDDVQFPYPASIFEVEEDSGRVITRVNLNEEPTTIFKLVVVAFDDGEP 1014



 Score = 46.6 bits (109), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 56/119 (47%), Gaps = 8/119 (6%)

Query: 76  RVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDTLMT---TSATVNISV 132
           +V Y L N +   F I+  G I     L+ E  D Y   V ATD  +    ++ T+ I V
Sbjct: 751 QVHYSLGN-FNNLFRITSNGSIYTAVKLNREVRDYYELVVVATDGAVHPRHSTLTLAIKV 809

Query: 133 VNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMF 191
           ++++D  P F    Y + +      +L  G+ I ++EA D D G  V+  +R P  K F
Sbjct: 810 LDIDDNSPVFTNSTYTVLVEE----NLPAGTTILQIEAKDVDLGANVSYRIRSPEVKHF 864


>gi|321476878|gb|EFX87838.1| hypothetical protein DAPPUDRAFT_311854 [Daphnia pulex]
          Length = 3133

 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 58/176 (32%), Positives = 83/176 (47%), Gaps = 13/176 (7%)

Query: 59  PVNYVLLTVTTNKPRDLRVKYWL-SNDYGERFSISRQ---GDISLMQCLDYETEDSYRFT 114
           P   VL     ++  + R++Y L   +   RFS+S Q   G IS+ Q LDY+ E  +  T
Sbjct: 744 PGTPVLTVTAADRDENPRLQYSLVGGNVRGRFSVSSQNGQGLISVAQPLDYKQEKRFVLT 803

Query: 115 VYATDT-LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADG 173
           V A+D+   + +ATV ++V + N   P F    Y   +      D   G+ +  V A+DG
Sbjct: 804 VQASDSGGRSDTATVYLNVSDANTHAPAFEAAPYSATV----FEDAPIGTTVLIVAASDG 859

Query: 174 DKGD--RVTLSLRGPYEKMFSINDS--GHISIVDLSALNTSTIQLVVVATDTGNPP 225
           D GD  R+T  L G     FSI  +    I+   L    TS   L + A D GNPP
Sbjct: 860 DVGDNARITYGLSGELVPEFSIQPATGAIITTKQLDRERTSGYLLTITARDNGNPP 915



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 76/265 (28%), Positives = 114/265 (43%), Gaps = 22/265 (8%)

Query: 13  LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKP 72
           LV+RA    N  R     L+V+    +    +F  + +  S +EN+PV + ++ V     
Sbjct: 594 LVIRAQDGGNPSRSNTTQLLVNVRDVNDNAPRFYTSLFQESVIENVPVGHSIVRVQAYDA 653

Query: 73  RDLR---VKYWLSNDYGER-FSIS-RQGDISLMQCLDYETEDSYRFTVYATDTL-MTTSA 126
            D     + Y +  D  +  F I    G I  ++ LD E    + F V ATD    T +A
Sbjct: 654 DDADNALISYRIQMDEDQLPFGIDPDTGWIVTVRDLDREENHHHEFEVLATDGGGKTATA 713

Query: 127 TVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSL-RG 185
            V + + + ND DP F    Y+  +      D TPG+ +  V AAD D+  R+  SL  G
Sbjct: 714 RVVLQIQDQNDNDPVFWPKVYDAIVGE----DATPGTPVLTVTAADRDENPRLQYSLVGG 769

Query: 186 PYEKMFSI---NDSGHISIVD-LSALNTSTIQLVVVATDTGNPPRQASV-----PAIMHF 236
                FS+   N  G IS+   L         L V A+D+G     A+V      A  H 
Sbjct: 770 NVRGRFSVSSQNGQGLISVAQPLDYKQEKRFVLTVQASDSGGRSDTATVYLNVSDANTHA 829

Query: 237 P--EAIVQQASSKLNSGTSSTVLII 259
           P  EA    A+   ++   +TVLI+
Sbjct: 830 PAFEAAPYSATVFEDAPIGTTVLIV 854



 Score = 39.7 bits (91), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 57/203 (28%), Positives = 94/203 (46%), Gaps = 21/203 (10%)

Query: 44  QFSKNEYSVSALENL-----PVNYVLLTVTTNKPRDLRVKYWL--SNDYGERFSISRQGD 96
           QFS+  Y+V   EN+     P+   +     +   +  ++Y L   N  G     S  GD
Sbjct: 518 QFSERTYTVDVAENVNWAENPIVARIRATDADVGPNAVLRYSLIGGNTQGHFVIDSLSGD 577

Query: 97  ISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQY-ELFLP 152
           ++++Q LD+ET  SYR  + A D      + +  + ++V +VND  PRF    + E  + 
Sbjct: 578 VAVVQPLDFETVRSYRLVIRAQDGGNPSRSNTTQLLVNVRDVNDNAPRFYTSLFQESVIE 637

Query: 153 HIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEK---MFSIN-DSGHI-SIVDLSAL 207
           ++P+     G  I +V+A D D  D   +S R   ++    F I+ D+G I ++ DL   
Sbjct: 638 NVPV-----GHSIVRVQAYDADDADNALISYRIQMDEDQLPFGIDPDTGWIVTVRDLDRE 692

Query: 208 NTSTIQLVVVATDTGNPPRQASV 230
                +  V+ATD G     A V
Sbjct: 693 ENHHHEFEVLATDGGGKTATARV 715



 Score = 39.3 bits (90), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 71/162 (43%), Gaps = 19/162 (11%)

Query: 89  FSISRQ-GDISLMQCLDYETEDSYRFTVYATDTLM--------TTSATVNISVVNVNDWD 139
           F+I  Q G I+    LD E+ D +   V AT+ +         + +ATV I+V + ND+ 
Sbjct: 349 FAIDGQTGSITTSARLDRESMDVHYLRVTATEVMAGDGRSQPRSATATVQINVEDRNDFA 408

Query: 140 PRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDR--VTLSLRGPY--EKMFSIN- 194
           P F  P YE  +        + G+ +  V A D D G    V  S+  P+   + F I+ 
Sbjct: 409 PTFEQPSYETSIKE----SASIGTAVLTVRAKDQDAGANADVHYSIVNPFGANEAFRIDA 464

Query: 195 DSGHISI-VDLSALNTSTIQLVVVATDTGNPPRQASVPAIMH 235
            +G IS  + L         L + A D G    + S  A++H
Sbjct: 465 KTGVISTRLALDRETNGQYNLTIQAVDQGPVQERQSATAMVH 506


>gi|292621593|ref|XP_002664697.1| PREDICTED: protocadherin-16-like [Danio rerio]
          Length = 3237

 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 56/151 (37%), Positives = 77/151 (50%), Gaps = 11/151 (7%)

Query: 91   ISRQGDISLMQCLDYETEDSYRFTVYATDT----LMTTSATVNISVVNVNDWDPRFRYPQ 146
            +S  G + +   LD E ++ Y  TV AT        T SATV +SV++ ND  PRF   Q
Sbjct: 1016 VSDSGWLFVKSALDREAKEMYLLTVLATSGNGQLKKTGSATVRVSVMDENDNTPRFT--Q 1073

Query: 147  YELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPY-EKMFSIND-SGHISI-VD 203
               FL      +L  G+  G+V A+D D G    LS R  + ++ F IN  +G IS  + 
Sbjct: 1074 ERAFL--AVRENLPAGTGFGRVSASDRDAGLNGRLSYRLLHLDRHFQINSHTGEISTKLS 1131

Query: 204  LSALNTSTIQLVVVATDTGNPPRQASVPAIM 234
            L     S+ QL+VVA D G PPR A+  A +
Sbjct: 1132 LDRELQSSYQLIVVAQDGGTPPRSATGTAFI 1162



 Score = 61.6 bits (148), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 58/189 (30%), Positives = 96/189 (50%), Gaps = 18/189 (9%)

Query: 52   VSALENLPVNYVL---LTVTTNKPRDLRVKYWL-SNDYGERFSIS-RQGDISLMQCLDYE 106
            VS +E+ PV +V+   + V  ++  + RV Y + S +   +FSI+   G +S+++ +D E
Sbjct: 1507 VSVMEDQPVGFVVVYVMAVDADQGENGRVTYRIQSGNVRGKFSINPDTGSLSILRPIDRE 1566

Query: 107  TEDSYRFTVYATDTLM---TTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTP-G 162
             ED Y  T+ A D  +   ++S  +++ V++VND  P F+  QYE F     +A+  P G
Sbjct: 1567 EEDLYNLTIVAEDHGLQQRSSSQLLSVQVIDVNDEAPYFQESQYEAF-----IAENQPAG 1621

Query: 163  SVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSGHISIVDLSALNTST---IQLVVVAT 219
            S +  V A+D D+G    ++        FSI+    + I    AL+        L V A 
Sbjct: 1622 STVLVVSASDMDQGTNGIVTYGSIVGDDFSIHPVTGV-ITTTKALDREAQGVYALTVYAR 1680

Query: 220  DTGNPPRQA 228
            D G+PP  A
Sbjct: 1681 DGGSPPNFA 1689



 Score = 58.9 bits (141), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 69/231 (29%), Positives = 110/231 (47%), Gaps = 20/231 (8%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTTNKPRDL----RVKYWLSNDYGERFSI-SRQGDIS 98
            +F++    ++  ENLP       V+ +  RD     R+ Y L +     F I S  G+IS
Sbjct: 1070 RFTQERAFLAVRENLPAGTGFGRVSASD-RDAGLNGRLSYRLLH-LDRHFQINSHTGEIS 1127

Query: 99   LMQCLDYETEDSYRFTVYATDTLM---TTSATVNISVVNVNDWDPRFRYPQYELFLPHIP 155
                LD E + SY+  V A D      + + T  I+V++ ND  P F   Q    L    
Sbjct: 1128 TKLSLDRELQSSYQLIVVAQDGGTPPRSATGTAFITVLDENDNAPSFSNAQTGRELLLQA 1187

Query: 156  LADLTPGSVIGKVEAADGDKGDRVTL--SLRGPYEKMFSIN-DSGHI-SIVDLSALNTST 211
            L     G ++G V A D D+G+  T+  S+ GP  + F++N ++G + S   LS      
Sbjct: 1188 LEGQPSGFLLGTVHAKDPDEGENGTIFYSMSGPRAERFTLNPNTGELRSSSALSHSERPE 1247

Query: 212  IQLVVVATDTGNPPRQASVPAIMHFPEAIVQQASSKLNSGTSSTVLIILGV 262
               +++A+D G+PP Q+S+ A+      I   +SSK +  T+S  LI+  V
Sbjct: 1248 YSFIILASDRGSPP-QSSIIAL-----KIQVLSSSKGSPNTNSQPLILKSV 1292



 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 51/154 (33%), Positives = 78/154 (50%), Gaps = 11/154 (7%)

Query: 81   LSNDYGERFSISR-QGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWD 139
            L +D   +F I R  G +SL   LD+E +  Y  TV ++D+   + A + I V +VND  
Sbjct: 2266 LDSDTQGKFGIHRYGGGVSLTTPLDFEIKTWYTLTVSSSDSKQQSHANLTILVEDVNDNA 2325

Query: 140  PRFRYPQYELFLPHIPLADLTP-GSVIGKVEAADGDKGDRVTLSLRGPYEK-MFSINDS- 196
            P F    YE     + LA+ +P GS +  V A D D G+   ++ R    K MF I+ S 
Sbjct: 2326 PVFSQDLYE-----VTLAEHSPAGSSVITVTATDKDSGENGRITYRVVSTKDMFYIDPSN 2380

Query: 197  GHISIVDLSALNTS--TIQLVVVATDTGNPPRQA 228
            G + I      ++   +I +V+ A+D+G PP  A
Sbjct: 2381 GTLFIKKEVEFDSQRPSILVVIEASDSGTPPLTA 2414



 Score = 52.0 bits (123), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 42/140 (30%), Positives = 65/140 (46%), Gaps = 16/140 (11%)

Query: 97  ISLMQCLDYETEDSYRFTVYATDTL---MTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
           I + Q LD E +D Y   V ATD+    +   ++  I V++VND  P F   +Y   +P 
Sbjct: 382 ICVDQILDREEQDHYELRVMATDSGTPPLRAESSFTIQVIDVNDNPPLFDQQEYTQVIPE 441

Query: 154 IPLADLTPGSVIGKVEAADGDKG-----DRVTLSLRGPYEKMFSINDSGHISIVDLSALN 208
           +      PGS + +V A D D+G         L   G +   FS++    + +  L+ L+
Sbjct: 442 VAF----PGSFVVQVTARDKDQGPNGDVQYSILQNEGTHSDWFSVDAVTGV-VTTLTQLD 496

Query: 209 TS---TIQLVVVATDTGNPP 225
                T  + VVA+D G PP
Sbjct: 497 YEIDPTPSITVVASDRGRPP 516



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 54/176 (30%), Positives = 84/176 (47%), Gaps = 13/176 (7%)

Query: 76   RVKYWLSNDYGERFSISRQ-GDISLMQCLDYETEDSYRFTVYATDTLMT----TSATVNI 130
            +V Y+LS +    F + +  G I     LD E   SY F VYA D+  T    +SA V +
Sbjct: 1845 QVVYFLSRESSGMFIVDQHTGRIITAATLDREKVASYNFQVYAMDSSATNPRNSSAEVAV 1904

Query: 131  SVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR--GPYE 188
             +++VND  P F     +  + ++ ++ L+   V+  + A D D G   ++  R   P  
Sbjct: 1905 HILDVNDNAPFFIT---DPLIINVSISSLSNHRVLATMRAEDKDFGANGSVFYRFANPV- 1960

Query: 189  KMFSIND-SGHISIVD-LSALNTSTIQLVVVATDTGNPPRQASVPAIMHFPEAIVQ 242
            K F+IN  +G I   + L AL  S   L+V A D GNP + +    I++  E   Q
Sbjct: 1961 KGFTINSLTGAIQATEKLQALTQSQRILIVEAMDQGNPSQSSLGVVIVYIREQSYQ 2016



 Score = 48.9 bits (115), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 62/263 (23%), Positives = 110/263 (41%), Gaps = 26/263 (9%)

Query: 21   DNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNY---VLLTVTTNKPRDLRV 77
            D Q  +ALA + V     +     F     + S  EN P N    +L  +  +K     +
Sbjct: 2628 DGQGHFALAPVTVEIKDINNNRPYFPLKSLTASIRENQPQNALVTILHAIDHDKGAYGEL 2687

Query: 78   KYWLSNDYG---ERFSISR-QGDISLMQCLDYETEDSYRFTVYATDTL-MTTSATVNISV 132
            +Y+L+ + G   + F +++  G++      DYE  +++ F   A DT   T + TV + V
Sbjct: 2688 RYFLTYNAGNGKDSFLVNQTSGEVRTRFTFDYEKTNTFNFIAIAMDTGNYTATVTVQVFV 2747

Query: 133  VNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG-DRV---TLSLRGPYE 188
               +++DP F    +   +P         G  IG+V A D D G D +   TL+   PY 
Sbjct: 2748 TGEDEYDPVFTESDFAFHVPE----GAKKGQSIGQVNANDEDGGVDGIVLYTLANSSPY- 2802

Query: 189  KMFSINDSGHISIVDLSALNTSTIQLVVVATDTGNPPRQASVPAIMHFPEAIVQQASSKL 248
              F +N S  +  + + A +          T +    RQ ++  I H P    ++ S+++
Sbjct: 2803 --FELNTSTGVISLKMDAYHRH-------VTRSKRETRQMTLDVIAHSPLENSRKTSAQI 2853

Query: 249  NSGTSSTVLIILGVVLIVLGFVI 271
                + T   +   + +VL   I
Sbjct: 2854 TVDVTHTSFGLTTDMNVVLASAI 2876



 Score = 48.9 bits (115), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 63/223 (28%), Positives = 101/223 (45%), Gaps = 15/223 (6%)

Query: 13   LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKP 72
            L+V A+   N  + +L  +IV     S + ++FS+N   VS  EN      ++ +    P
Sbjct: 1988 LIVEAMDQGNPSQSSLGVVIVYIREQSYQGVRFSRNTRDVSLQENAAKGTAVVQIHAQYP 2047

Query: 73   RDLR--VKYWL-SNDYGERFSISRQ-GDISLMQC--LDYETEDSYRFTVYATDTLMTTSA 126
                  + Y + S +  + FSIS   G+I +     LD+E     R  V A     ++  
Sbjct: 2048 DGSTSGINYSIFSGNKQQSFSISHHTGEIWVEDSTGLDFEETPRLRLVVKAETASSSSFM 2107

Query: 127  TVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGD--RVTLSLR 184
             VN+ + +VND  PRF+   Y  ++      D      I +V A D D+G   +VT S+R
Sbjct: 2108 AVNLLLQDVNDNLPRFQLHNYVAYVREAQGYD----HPIIQVLANDLDQGQNGQVTYSIR 2163

Query: 185  -GPYEKMFSIND-SGHISIVDLSALNTST-IQLVVVATDTGNP 224
                  +F I+  +G IS   +      T   LV++ATD G+P
Sbjct: 2164 SSSMSGLFKIDPITGSISTAAIMDREIWTQTNLVIMATDRGSP 2206



 Score = 46.2 bits (108), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 68/264 (25%), Positives = 118/264 (44%), Gaps = 39/264 (14%)

Query: 5    DDF-LQPITLVV---RAIQYDNQDRYALATLIVSKAG-------TSLRELQFSKNE---- 49
            DDF + P+T V+   +A+  + Q  YAL T+     G       T++R     +N+    
Sbjct: 1648 DDFSIHPVTGVITTTKALDREAQGVYAL-TVYARDGGSPPNFAKTTVRVTVLDENDNRPA 1706

Query: 50   -----YSVSALENL-PVNYVLLTVTTNKPRDLRVKYWLSND---YGERFSISRQGDISLM 100
                 YS+   EN  PV    +  T     D  + Y+   D   +G+     + G +S  
Sbjct: 1707 FGRVYYSLEVPENQEPVTLFTIRATDQDSGDSGLVYYRITDGDHFGDFHLDKKLGVLSTS 1766

Query: 101  QCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLA 157
            + LD E+   Y  TV A D     +T++ T++ISV+++ND  P F    Y + +      
Sbjct: 1767 RALDRESRAKYTLTVEAQDQGIPSLTSTVTLDISVLDLNDNSPVFPSSSYSVEV----SE 1822

Query: 158  DLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIND-SGHI---SIVDLSALNTST 211
            D + GS++ +V A+D D+G   +V   L      MF ++  +G I   + +D   + +  
Sbjct: 1823 DASAGSLVLEVSASDKDEGSNSQVVYFLSRESSGMFIVDQHTGRIITAATLDREKVASYN 1882

Query: 212  IQLVVVATDTGNPPRQASVPAIMH 235
             Q+  + +   N PR +S    +H
Sbjct: 1883 FQVYAMDSSATN-PRNSSAEVAVH 1905



 Score = 44.3 bits (103), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 54/215 (25%), Positives = 94/215 (43%), Gaps = 28/215 (13%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGERFSISRQGDISLMQ 101
            FS++ Y V+  E+ P    ++TVT    +   + R+ Y + +     +     G + + +
Sbjct: 2328 FSQDLYEVTLAEHSPAGSSVITVTATDKDSGENGRITYRVVSTKDMFYIDPSNGTLFIKK 2387

Query: 102  CLDYETED-SYRFTVYATDTL---MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLA 157
             ++++++  S    + A+D+    +T  +TV + V +VND  P F   +Y   +      
Sbjct: 2388 EVEFDSQRPSILVVIEASDSGTPPLTALSTVQVHVSDVNDNAPVFHQTEYRASVSE---- 2443

Query: 158  DLTPGSVIGKVEAADGD-KGDRVTLSL---RGPYEKMFSINDS------------GHISI 201
            D  PGS I  +EAADGD   D          G     F I  S            G + +
Sbjct: 2444 DEVPGSTILTLEAADGDLSRDNCGFDFAIASGNIGNTFQIESSVRFLEGHGFQTVGMLIL 2503

Query: 202  VD-LSALNTSTIQLVVVATDTGNPPRQASVPAIMH 235
             D L     S+  L +V +D G P R +SVP +++
Sbjct: 2504 ADKLDFEIASSYNLTIVVSDRGIPQRSSSVPVLIN 2538



 Score = 42.4 bits (98), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 53/193 (27%), Positives = 82/193 (42%), Gaps = 19/193 (9%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRDLR---VKYWLSNDYGE----RFSISRQ-GD 96
           F    Y+ S  EN P     + VT           + Y L +  G     +F++ +  G 
Sbjct: 537 FGSKFYNASIKENAPARTCFMEVTATDADGGSFGSISYSLGSGQGSVTPSQFTVDKHNGQ 596

Query: 97  ISLMQCLDYETEDS-YRFTVYATDTL-MTTSATVNISVVNVNDWDPRFRYPQYELFLPHI 154
           I     LD +   + Y FTV A D   +++ A V + ++++ND  P F    Y + L   
Sbjct: 597 ICTTTSLDRDQGPANYDFTVTAVDGGGLSSVAYVRVDLIDINDNQPAFYPVSYAVSLS-- 654

Query: 155 PLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEK---MFSIN-DSGHISIVD-LSALNT 209
                 PG+ + KV A D D  +   ++ R   E     F++N D+G IS+   L     
Sbjct: 655 --TQSAPGTSVLKVTAHDPDAAENGRVTYRTVPEGSSPFFTLNKDTGVISLSRALHGKAN 712

Query: 210 STIQLVVVATDTG 222
           S I +VV A D G
Sbjct: 713 SVITMVVSAQDGG 725



 Score = 40.8 bits (94), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 46/146 (31%), Positives = 66/146 (45%), Gaps = 16/146 (10%)

Query: 95   GDISLMQCLDYETEDSYRFTVYATDTLMTT------SATVNISVVNVNDWDPRFRYPQYE 148
            G +SL   LD+E   S    V A+D+ +        S T  I V +VND +P F      
Sbjct: 1448 GALSLGMMLDHEKTSSLLLVVQASDSALDVSQRRRGSVTARIFVTDVNDNEPVFISASVV 1507

Query: 149  LFLPHIPLADLTPGSVIGKVEAADGDKGD--RVTLSLR-GPYEKMFSIN-DSGHISIVD- 203
              +   P+     G V+  V A D D+G+  RVT  ++ G     FSIN D+G +SI+  
Sbjct: 1508 SVMEDQPV-----GFVVVYVMAVDADQGENGRVTYRIQSGNVRGKFSINPDTGSLSILRP 1562

Query: 204  LSALNTSTIQLVVVATDTGNPPRQAS 229
            +         L +VA D G   R +S
Sbjct: 1563 IDREEEDLYNLTIVAEDHGLQQRSSS 1588



 Score = 40.4 bits (93), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 46/152 (30%), Positives = 67/152 (44%), Gaps = 12/152 (7%)

Query: 92  SRQGDISLMQCLDYETEDSYRFTVYA--TDTLMTTSATVNISVVNVNDWDPRFRYPQYE- 148
           S  G +     LD+E + S    V A   +        V I+V +VND  P F     E 
Sbjct: 800 SETGALRTSLPLDHEAQPSLNLEVQAHCGNPPAFGQTRVRITVSDVNDNAPVFLPSSSES 859

Query: 149 LFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-DSGHISIV-D 203
           L LP     D   G+V+ KV+A D D G    LS         + FSI+ +SGH+ ++  
Sbjct: 860 LILPE----DTRMGTVVYKVQAEDRDSGPNGLLSFDLFTSSAHRTFSIDRNSGHLRLIGS 915

Query: 204 LSALNTSTIQLVVVATDTGNPPRQASVPAIMH 235
           LS        L V+A D+G P   ++   ++H
Sbjct: 916 LSYETMPRYDLQVIAKDSGAPQLSSTFTLVIH 947



 Score = 38.5 bits (88), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 47/151 (31%), Positives = 66/151 (43%), Gaps = 19/151 (12%)

Query: 92  SRQGDISLMQCLDYETEDSYRFTVYATDTLM---TTSATVNISVVNVNDWDPRFRYPQYE 148
           SR G I+L + LDYE    +   V A D       T++ V I V + ND  P        
Sbjct: 267 SRTGVITLNKPLDYEMRRVHELVVQARDNASQPEVTNSFVTIQVRDYNDNQPTMTI---- 322

Query: 149 LFL-----PHIPLADLTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKM-FSINDSG-HI 199
           +FL     P I      PG  + ++   D D G+   V +SL G   K   +  DS  ++
Sbjct: 323 IFLSEDGSPRISEG-AQPGQYVARISVTDPDYGEYANVNVSLEGGNGKFALTTKDSIIYL 381

Query: 200 SIVD--LSALNTSTIQLVVVATDTGNPPRQA 228
             VD  L        +L V+ATD+G PP +A
Sbjct: 382 ICVDQILDREEQDHYELRVMATDSGTPPLRA 412


>gi|260832660|ref|XP_002611275.1| hypothetical protein BRAFLDRAFT_120347 [Branchiostoma floridae]
 gi|229296646|gb|EEN67285.1| hypothetical protein BRAFLDRAFT_120347 [Branchiostoma floridae]
          Length = 2655

 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 64/221 (28%), Positives = 104/221 (47%), Gaps = 28/221 (12%)

Query: 92   SRQGDISLMQCLDYETEDSYRFTVYATDT-LMTTSATVNISVVNVNDWDPRFRYPQYELF 150
            S  G++   +  DYET+++Y F + ATDT  ++T   V +S+ +V+++ P F    Y   
Sbjct: 2066 SSTGEVRTREVFDYETQNTYGFYIRATDTGGLSTDVQVGVSIQSVDEFPPVFTQDNYIFT 2125

Query: 151  LPHIPLADLTPGSVIGKVEAADGDKGDR--VTLSLRGPYEKMFSINDSGHI--------- 199
            +    +A+   G+ +G+VEA D D G    V+ S+R      F+IN+SG I         
Sbjct: 2126 V----IANADVGTFVGQVEATDADGGPDGIVSYSIR---NDKFAINESGVITVKASLLEG 2178

Query: 200  -SIVDLS------ALNTSTIQLVVVATDTGNPPRQASVPAIMHFPEAIVQQASSKLNSGT 252
             ++ D S      A N   I L+V A+ +G P   +   AI    +      +    S  
Sbjct: 2179 NTVTDPSRRKRRQAENEDQINLIVEAS-SGRPGSLSEQKAISVKIDRSCPGCNPSAQSAL 2237

Query: 253  SSTVLIILGVVLI-VLGFVIILLILYIHKNKHTKNNGPPGS 292
            S    + L ++LI  L  VI+ ++L + K K  K   PP S
Sbjct: 2238 SPLTPLSLALILIFALIAVILCVVLIVLKFKRRKQRPPPTS 2278



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 66/223 (29%), Positives = 93/223 (41%), Gaps = 18/223 (8%)

Query: 25  RYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTT-NKPRDLR--VKYWL 81
           R++  TL+V     +     FS   Y V   E+  VNY  L VT  ++   L   + Y+L
Sbjct: 285 RFSNLTLLVIIQDENDNGPMFSPTFYDVQVPESASVNYRFLQVTALDRDSGLNEFITYYL 344

Query: 82  SNDYGE-RFSISRQGDISLMQCLDYETEDSYRFTVYATDTL---MTTSATVNISVVNVND 137
           SN      F +   G + +   LD E  DSY   V A D        +A V ++V + ND
Sbjct: 345 SNSADSPNFGMFPDGWLYVKHRLDRELRDSYFLQVVARDNGSPPRNATANVRVTVTDDND 404

Query: 138 WDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSINDS 196
            DPRF    Y   L    + +L  G+ +G V A D D G+   L     P    F I   
Sbjct: 405 NDPRFTQESYHFSL----VENLPTGTTVGTVFAVDADIGNNGDLDFSIIPNNSSFIITTG 460

Query: 197 GHISIVD----LSALNTSTIQLVVVATDTGNPPRQASVPAIMH 235
               ++     L    T+   LV+   D G PPR A+  A +H
Sbjct: 461 HQRGVIKTKRPLDRETTARYDLVLKVRDRGTPPRTAT--ATLH 501



 Score = 55.1 bits (131), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 70/230 (30%), Positives = 101/230 (43%), Gaps = 14/230 (6%)

Query: 13   LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNK- 71
            L +RA+          ATL +S    +     F +    V+ LE   V   L  VT N  
Sbjct: 1544 LELRAVDKGTPRLTGSATLRISVVDINDNRPTFPEPYPPVNVLEGAEVGSELALVTANDI 1603

Query: 72   PRDLRVKYWLS--NDYGERFSISR-QGDISLMQCLDYETEDSYRFTVYATDTLMTTSATV 128
              D  + Y  +   + G  FSI R  G ++L Q LD E+  SY  T+ A+D + T    V
Sbjct: 1604 DTDPTITYTFTTHGNPGGVFSIDRYSGKVTLAQPLDRESVQSYIITIMASDEVHTDQTNV 1663

Query: 129  NISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGD--RVTLSLR-G 185
             I+V++ ND  P F    Y++ +  +    + P   +  V A D D G    +T S+   
Sbjct: 1664 EINVLDENDNPPVFDQQTYQVDIAEM----VPPHYSVATVTATDRDAGSNAEITYSMTVA 1719

Query: 186  PYEKMFSINDSGHISIVDLSALN--TSTIQLVVVATDTGNPPRQASVPAI 233
            P E  +    +G I       +N   STIQLV+ A D G  P  ASV A+
Sbjct: 1720 PVEGFYVDPRNGTIFTNKTIEINRMQSTIQLVIEARDHG-VPSLASVVAV 1768



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 51/188 (27%), Positives = 89/188 (47%), Gaps = 18/188 (9%)

Query: 25   RYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDL----RVKYW 80
            R+   +++VS   T+     F   EY ++  EN P NY ++        D+    +V+Y 
Sbjct: 1028 RFGFTSVVVSVLDTNDHAPVFKDAEYMMTVPENQP-NYGVIHTVVAYDADIGTNGQVRYE 1086

Query: 81   L-SNDYGERFSISR-QGDISLM--QCLDYETEDSYRFTVYA---TDTLMTTSATVNISVV 133
            +   + G +F++    G++S++  Q LD ET   Y   V A   TD   T++  + ++V 
Sbjct: 1087 IIDGNVGGKFAVDAVTGELSVISDQALDRETVPLYHLIVQAHDNTDAPRTSTTNITVAVS 1146

Query: 134  NVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMF 191
            + ND +P F  P Y+  +      D++ GS + +V A D D+G    V   L      MF
Sbjct: 1147 DENDNNPIFTDPSYQQTIQE----DVSVGSTVIRVTAQDRDEGVNGEVFYFLSNETNGMF 1202

Query: 192  SINDSGHI 199
             I+++  I
Sbjct: 1203 RIDNTSGI 1210



 Score = 47.4 bits (111), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 59/211 (27%), Positives = 93/211 (44%), Gaps = 17/211 (8%)

Query: 29  ATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLR---VKYWL-SND 84
           A + VS  GT      FS+  YS S  E+    + + TV  +     +   + Y + S D
Sbjct: 79  ANVAVSVIGTGEMPPVFSQARYSFSVPEDAARQHTVGTVMASHSDPGKTDPITYSIHSGD 138

Query: 85  YGERFSIS-RQGDISLMQCLDYETEDSYRFTVYAT--DTLMTTSATVNISVVNVNDWDPR 141
               F+I    G I     LD+ET  S    + A+  +  +   A VNI+++++ND  P 
Sbjct: 139 RQGYFAIDPTTGRIYTQLNLDHETVSSLLLNIQASSGNPPVYGRAQVNITILDINDNRPE 198

Query: 142 FRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDR--VTLSLRGPYEKMFSIND-SGH 198
           F      + +      +++PG++I    A D D G    V  SL    + +FS+N  SG 
Sbjct: 199 FTVATESVAITE----NVSPGTIIFVASAQDQDAGSNGLVRYSLLNNQDNLFSVNSISGE 254

Query: 199 ISI---VDLSALNTSTIQLVVVATDTGNPPR 226
           + I   VD    N    +L ++A D G P R
Sbjct: 255 VKILRSVDADDDNPLRYELKIMAHDQGTPQR 285



 Score = 45.8 bits (107), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 43/152 (28%), Positives = 72/152 (47%), Gaps = 15/152 (9%)

Query: 55  LENLPVNY---VLLTVTTNKPRDLRVKYWL-SNDYGERFSIS-RQGDISLMQCLDYETED 109
           +E+ PV Y    ++ V  +   + RV Y + S + G +F +    G +++ + LD ETE 
Sbjct: 848 MEDEPVGYHVMYVIAVDDDFGDNGRVTYQIVSGNQGGKFLLDPNTGLLAIERRLDRETES 907

Query: 110 SYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIG 166
            Y   + ATD      + S  + I V +VND  PRF    Y+  +      + +PG+ + 
Sbjct: 908 RYVLNITATDHGTPSRSASHLITIHVRDVNDNQPRFLQDTYQASVSE----NQSPGTSVI 963

Query: 167 KVEAADGDKGDRVTLSL---RGPYEKMFSIND 195
           ++ A D D G    L+    RG  E  F+I +
Sbjct: 964 QITALDADAGTNGVLTYNIPRGVAEDRFTIEE 995



 Score = 45.1 bits (105), Expect = 0.065,   Method: Compositional matrix adjust.
 Identities = 45/154 (29%), Positives = 73/154 (47%), Gaps = 15/154 (9%)

Query: 87   ERFSISRQ-GDISLMQCLDYETEDSYRFTVYATDTLMTTS---ATVNISVVNVNDWDPRF 142
            +RF+I  Q G I     LD E +DSY  T YA D    +     +V +SV++ ND  P F
Sbjct: 989  DRFTIEEQTGVIRTAFRLDREEKDSYIVTAYARDGAYPSRFGFTSVVVSVLDTNDHAPVF 1048

Query: 143  RYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIND-SGH 198
            +  +Y + +P     +     VI  V A D D G    +    + G     F+++  +G 
Sbjct: 1049 KDAEYMMTVPE----NQPNYGVIHTVVAYDADIGTNGQVRYEIIDGNVGGKFAVDAVTGE 1104

Query: 199  ISIVDLSALNTSTI---QLVVVATDTGNPPRQAS 229
            +S++   AL+  T+    L+V A D  + PR ++
Sbjct: 1105 LSVISDQALDRETVPLYHLIVQAHDNTDAPRTST 1138



 Score = 43.5 bits (101), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 64/237 (27%), Positives = 98/237 (41%), Gaps = 38/237 (16%)

Query: 25  RYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSND 84
           R A A + V+    +  + +F++  Y  S +ENLP    + TV         V   + N+
Sbjct: 389 RNATANVRVTVTDDNDNDPRFTQESYHFSLVENLPTGTTVGTV-------FAVDADIGNN 441

Query: 85  YGERFSI------------SRQGDISLMQCLDYETEDSYRFTVYATDTLM---TTSATVN 129
               FSI             ++G I   + LD ET   Y   +   D      T +AT++
Sbjct: 442 GDLDFSIIPNNSSFIITTGHQRGVIKTKRPLDRETTARYDLVLKVRDRGTPPRTATATLH 501

Query: 130 ISVVNVNDWDPRFRYPQYEL--FLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR--- 184
           I V ++ND  P F +    L     H P      G+ + +V A D D G+  T++ R   
Sbjct: 502 IVVEDMNDNAPYFSHSGQYLGEVEEHQP-----NGTEVIRVLADDPDNGENGTITYRLVT 556

Query: 185 ----GPYEKMFSIN-DSGHISI-VDLSALNTSTIQLVVVATDTGNPPRQASVPAIMH 235
                  E+MF+I+  SG I+    L      T  L V A D G PPR+ +    +H
Sbjct: 557 STPGMNGEEMFNIHSQSGLITTNAPLDREQKPTYVLSVAAVDGGTPPRERTTFVHIH 613



 Score = 43.1 bits (100), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 60/234 (25%), Positives = 103/234 (44%), Gaps = 24/234 (10%)

Query: 13   LVVRAIQYDNQD--RYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTN 70
            L+V+A  +DN D  R +   + V+ +  +     F+   Y  +  E++ V   ++ VT  
Sbjct: 1123 LIVQA--HDNTDAPRTSTTNITVAVSDENDNNPIFTDPSYQQTIQEDVSVGSTVIRVTA- 1179

Query: 71   KPRDLRVK----YWLSNDYGERFSISR-QGDISLMQCLDYETEDSYRFTVYATDTL---- 121
            + RD  V     Y+LSN+    F I    G I+  + LD E +  Y F  YA+D      
Sbjct: 1180 QDRDEGVNGEVFYFLSNETNGMFRIDNTSGIITTTRLLDREKQSVYSFDAYASDRGPFGP 1239

Query: 122  MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTL 181
             T++  V + + +VND  P F    +E  +      ++     +  V A D D G    +
Sbjct: 1240 RTSNVRVTVDISDVNDNAPVFTQVPFETTIER----NIGVNQQVVTVTAEDKDTGSNAEI 1295

Query: 182  SLR----GPYEKMFSIN-DSGHISI-VDLSALNTSTIQLVVVATDTGNPPRQAS 229
              R        + F+I   SG I+  V L   + +  +L V+A D G+P + ++
Sbjct: 1296 LYRFDSSNANSQKFNIGPQSGIITTQVSLVGDSANIFRLQVIAEDQGSPAKSST 1349



 Score = 37.7 bits (86), Expect = 8.3,   Method: Compositional matrix adjust.
 Identities = 53/208 (25%), Positives = 91/208 (43%), Gaps = 19/208 (9%)

Query: 31   LIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNK----PRDLRVKYWLSNDYG 86
            ++++ + +S+  L+F    YS    EN   N  +++V+ ++    P  +   +   ND  
Sbjct: 1352 VVITMSDSSMTTLRFDNGTYSAYISENAIANTDIISVSASREDGQPASVTYSFASGND-D 1410

Query: 87   ERFSIS-RQGDISLMQC--LDYETEDSYRF--TVYATDTLMTTSATVNISVVNVNDWDPR 141
            E F I+   G I++     LD+ET    R   T  AT   +   ATV +++ + ND  PR
Sbjct: 1411 ESFEINPTSGLITVKDSTNLDFETAQRVRLIVTAQATTPSLYGYATVWVNLRDENDNAPR 1470

Query: 142  FRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-DSG 197
            F   +Y   +          G  + +V A D D G    +    + G ++  F I+ D G
Sbjct: 1471 FDQDRYTTSV----WEGNDRGMFVIQVSATDADSGTNSEVQYSIVSGNHDNAFVIDRDRG 1526

Query: 198  HISI-VDLSALNTSTIQLVVVATDTGNP 224
             IS  V +      + +L + A D G P
Sbjct: 1527 IISTNVRMDREVRDSYRLELRAVDKGTP 1554


>gi|395817794|ref|XP_003782337.1| PREDICTED: protocadherin gamma-A9 [Otolemur garnettii]
          Length = 846

 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 76/274 (27%), Positives = 125/274 (45%), Gaps = 45/274 (16%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKP---RDLRVKYWLSND------YGERFSI-SRQ 94
           FS+  YSV   EN P    + +VT + P    + R+ Y L+ D           SI S  
Sbjct: 469 FSQASYSVYLPENNPRGTSIFSVTAHDPDSNENSRIIYSLAEDIIQGAPLSSYLSINSDT 528

Query: 95  GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFL 151
           G I  ++  DYE     +  V A+D+    ++++A++++ V++ ND  P   YP     +
Sbjct: 529 GIIYALRSFDYEQFRDIQMQVTASDSGDPPLSSNASLSLFVLDQNDNAPEILYPA----I 584

Query: 152 P-----HIPLADLT--PGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-DSGHI- 199
           P      + LA  +  PG ++ KV A D D G    LS   L+     +FS+   +G + 
Sbjct: 585 PTDGSTGVELASRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKASEPGLFSVGLHTGEVR 644

Query: 200 ---SIVDLSALNTSTIQLVVVATDTGNPPRQASVPAIM----HFPEAIVQQASSKLNSGT 252
              +++D  AL  S   LVVV  D G PP  A+V   +      P+ +   +S ++    
Sbjct: 645 TARALLDRDALKQS---LVVVVQDHGQPPLSATVMLTVAVADSIPDILADLSSLEITEDP 701

Query: 253 SST------VLIILGVVLIVLGFVIILLILYIHK 280
            ++      V+ I  V  I L F+I+LL L + +
Sbjct: 702 EASDLTLYLVVAIAAVSCIFLAFIIMLLALRLRR 735



 Score = 47.0 bits (110), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 43/138 (31%), Positives = 62/138 (44%), Gaps = 17/138 (12%)

Query: 101 QCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLA 157
           Q LD E    Y  TV ATD     ++T   + + V ++ND  P F    Y ++LP     
Sbjct: 425 QILDREKASEYNITVTATDRGTPPLSTEIHITLQVTDINDNPPAFSQASYSVYLPE---- 480

Query: 158 DLTPGSVIGKVEAADGDKGD--RVTLSLR------GPYEKMFSIN-DSGHI-SIVDLSAL 207
           +   G+ I  V A D D  +  R+  SL        P     SIN D+G I ++      
Sbjct: 481 NNPRGTSIFSVTAHDPDSNENSRIIYSLAEDIIQGAPLSSYLSINSDTGIIYALRSFDYE 540

Query: 208 NTSTIQLVVVATDTGNPP 225
               IQ+ V A+D+G+PP
Sbjct: 541 QFRDIQMQVTASDSGDPP 558



 Score = 44.7 bits (104), Expect = 0.077,   Method: Compositional matrix adjust.
 Identities = 57/200 (28%), Positives = 79/200 (39%), Gaps = 29/200 (14%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWLSNDYGERFSI-----SRQGD 96
           F++  Y V  LEN+P    LLTV  + P +    +V Y       E+ S+      + G+
Sbjct: 259 FAQPIYRVKVLENVPPGTQLLTVAASDPDEGANGKVAYKFRK-INEKQSLLFQLNEKTGE 317

Query: 97  ISLMQCLDYETEDSYRFTVYATDTLMTTSAT-VNISVVNVNDWDPRFRYPQYELFLPHIP 155
           IS  + LDYE    Y   + A D       T + I V +VND  P        LF P   
Sbjct: 318 ISTAKSLDYEECSFYEMEIQAEDGGGLKGRTKILIMVEDVNDNRPEVTVTS--LFSP--V 373

Query: 156 LADLTPGSVIGKVEAADGDKG----------DRVTLSLRGPYEKMFSINDSGHISIVDLS 205
             D   G+VI    A D D G          + +T  L    E  +S+     ++   L 
Sbjct: 374 REDAPRGTVIALFNAHDQDSGKNGQVVCSIQENLTFRLENSEEDYYSL-----LTAQILD 428

Query: 206 ALNTSTIQLVVVATDTGNPP 225
               S   + V ATD G PP
Sbjct: 429 REKASEYNITVTATDRGTPP 448


>gi|332834285|ref|XP_507798.3| PREDICTED: protocadherin-15 [Pan troglodytes]
          Length = 1765

 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 61/195 (31%), Positives = 100/195 (51%), Gaps = 14/195 (7%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGER-FSISRQ-GDISLMQ 101
           +F +  YS+   E + V  VLL +         + Y + N   +R F++S   G ++L +
Sbjct: 602 RFPQLMYSLEISEAMRVGAVLLNLQATDREGDSITYAIENGDPQRVFNLSETTGILTLGK 661

Query: 102 CLDYETEDSYRFTVYATDTL--MTTSATVNISVVNVNDWDPRFRYPQYELFLP-HIPLAD 158
            LD E+ D Y   + A+D     T++ATVNI V +VND  P F     + +LP ++ + +
Sbjct: 662 ALDRESTDRYILIITASDGRPDGTSTATVNIVVTDVNDNAPVF-----DPYLPRNLSVVE 716

Query: 159 LTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDSGHI-SIVDLSALNTSTIQLV 215
               + +G+V+A D D G   +V  SL G +  +F I  +G I + V L+       +LV
Sbjct: 717 EEANAFVGQVKATDPDAGINGQVHYSL-GNFNNLFRITSNGSIYTAVKLNREVRDYYELV 775

Query: 216 VVATDTGNPPRQASV 230
           VVATD    PR +++
Sbjct: 776 VVATDGAVHPRHSTL 790



 Score = 51.6 bits (122), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 50/195 (25%), Positives = 87/195 (44%), Gaps = 28/195 (14%)

Query: 6   DFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYV-- 63
           DF Q   LV++A Q +     A A+L +     + +   F+   Y    LE+ PV     
Sbjct: 336 DFHQKFDLVIKAEQDNGHPLPAFASLHIEILDENNQSPYFTMPSYQGYILESAPVGATIS 395

Query: 64  --------LLTVTTNK------PRDLRVK----YWLSNDYGERFSISRQG---DISLMQC 102
                   L  V  +K      P  +  K    +   NDY   F++++ G    ++L+Q 
Sbjct: 396 DSLNLTSPLRIVALDKDIEDVPPSGVPTKDPELHLFLNDYTSVFTVTQTGITRYLTLLQP 455

Query: 103 LDYETEDSYRFTVYATDTLMTTSAT-VNISVVNVNDWDPRFRYPQYELFLPHIPLADLTP 161
           +D E + +Y F++ A D +  +    VNI V++ ND  P F    Y++++      D+ P
Sbjct: 456 VDREEQQTYTFSITAFDGVQESEPVIVNIQVMDANDNTPTFPEISYDVYV----YTDMRP 511

Query: 162 GSVIGKVEAADGDKG 176
           G  + ++ A D D+G
Sbjct: 512 GDSVIQLTAVDADEG 526



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 63/201 (31%), Positives = 93/201 (46%), Gaps = 26/201 (12%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDL--RVKYWLSNDYGERFSISR--QGDISLM 100
            F+ + Y++   ENLP    +L +   K  DL   V Y + +   + F       G++SL+
Sbjct: 806  FTNSTYTILVEENLPAGTTILQIEA-KDVDLGANVSYRIRSPEVKHFFALHPFTGELSLL 864

Query: 101  QCLDYET----EDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
            + LDYE     E S  F V A D   T+    ATV + V ++ND+ P F    Y+  +  
Sbjct: 865  RSLDYEAFPDQEASITFLVEAFDIYGTMPPGIATVTVIVKDMNDYPPVFSKRIYKGMV-- 922

Query: 154  IPLADLTPGSVIGKVEAADGDK----GDRVTL---SLRGPY-EKMFSIN-DSGH-ISIVD 203
                D   G+ I  V A D D       RV      ++ PY   +F +  DSG  I+ V+
Sbjct: 923  --APDAVKGTPITTVYAEDADPPGLPASRVRYRVDDVQFPYPASIFDVEEDSGRVITRVN 980

Query: 204  LSALNTSTIQLVVVATDTGNP 224
            L+   T+  +LVVVA D G P
Sbjct: 981  LNEEPTTIFKLVVVAFDDGEP 1001



 Score = 45.8 bits (107), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 56/119 (47%), Gaps = 8/119 (6%)

Query: 76  RVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDTLMT---TSATVNISV 132
           +V Y L N +   F I+  G I     L+ E  D Y   V ATD  +    ++ T+ I V
Sbjct: 738 QVHYSLGN-FNNLFRITSNGSIYTAVKLNREVRDYYELVVVATDGAVHPRHSTLTLAIKV 796

Query: 133 VNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMF 191
           ++++D  P F    Y + +      +L  G+ I ++EA D D G  V+  +R P  K F
Sbjct: 797 LDIDDNSPVFTNSTYTILVEE----NLPAGTTILQIEAKDVDLGANVSYRIRSPEVKHF 851


>gi|113206102|ref|NP_001038119.1| protocadherin-15 precursor [Gallus gallus]
 gi|85725331|gb|ABC79283.1| protocadherin-15-CD2/CD3 isoform 1 [Gallus gallus]
          Length = 2192

 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 67/246 (27%), Positives = 118/246 (47%), Gaps = 27/246 (10%)

Query: 6   DFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVL- 64
           D  Q   LV++A Q +     A A L +     + ++  F+K+ Y    LE+ PV   + 
Sbjct: 356 DLHQKFDLVIKAEQDNGHPLPAFANLHIEVLDENNQKPYFTKSTYEGFILESSPVGTTIS 415

Query: 65  ----------LTVTTN---KPRDLRVKYWLSNDYGERFSISRQG---DISLMQCLDYETE 108
                     +TV  N   + +D ++  +L NDY   F++++ G    ++L+Q +D E +
Sbjct: 416 DSRNLTSPLQITVLDNDVEETKDPQLHLFL-NDYNTFFTVTQSGITRYLTLLQPVDREAQ 474

Query: 109 DSYRFTVYATDTLM-TTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGK 167
             Y F++ A+D +  +T  TVNI V++ ND  P F    Y + +      D+ PG  + K
Sbjct: 475 QLYTFSMIASDGVQESTPVTVNIVVIDANDNSPTFSNISYNVKI----YTDMGPGEGVIK 530

Query: 168 VEAADGDKG--DRVTLSLRGPYEKMFSIND-SGHISIVDLSALNTS-TIQLVVVATDTGN 223
           + A D D+G   ++   +    +  F IND +G I+I     L+   +  L V A+D+  
Sbjct: 531 LTAVDADEGPNGQIVYEILAGDQGDFIINDRTGLIAIAPGVVLSVGRSYALTVKASDSAP 590

Query: 224 PPRQAS 229
           P ++ S
Sbjct: 591 PAQRRS 596



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 58/195 (29%), Positives = 101/195 (51%), Gaps = 14/195 (7%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSN-DYGERFSISRQ-GDISLMQ 101
           +F +  YS+   E +    +LL +         ++Y + N D  + F++S+  G ++L +
Sbjct: 615 RFPQLMYSLEVSEAMRTGAILLNLQAFDREGDPIRYLIENGDPQQVFNLSQSSGLLALGK 674

Query: 102 CLDYETEDSYRFTVYATDTL--MTTSATVNISVVNVNDWDPRFRYPQYELFLP-HIPLAD 158
            LD E+ D Y   V A+D     T++ATVNI V +VND  P F     ++FLP ++ + +
Sbjct: 675 PLDRESTDRYILIVTASDGRPDGTSTATVNIVVTDVNDNGPVF-----DMFLPKNLSVQE 729

Query: 159 LTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDSGHI-SIVDLSALNTSTIQLV 215
               + +G+V A D D G   +V  SL   ++ +F I  +G I + V L+       +L+
Sbjct: 730 EEANAFVGQVRATDPDAGVNGQVHYSLAN-FKNLFRITSNGSIYTAVKLNREVRDYYELI 788

Query: 216 VVATDTGNPPRQASV 230
           V ATD    PR++++
Sbjct: 789 VEATDGAVDPRRSTL 803



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 63/201 (31%), Positives = 98/201 (48%), Gaps = 26/201 (12%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDL--RVKYWLSNDYG-ERFSISR-QGDISLM 100
            F+   YSV   ENLP   V L +   K  DL   V Y +      E F++++  G++SL+
Sbjct: 819  FTNASYSVLVPENLPPGTVFLQIEA-KDVDLGSNVTYRIRTQEALEYFALNKYTGELSLL 877

Query: 101  QCLDYE----TEDSYRFTVYATDTLMTTS---ATVNISVVNVNDWDPRFRYPQYELFLPH 153
            + LDYE    T+ ++ F V A D+  T     ATV + V ++ND+ P F    Y   +  
Sbjct: 878  KSLDYESFSDTDATFTFLVEAFDSKGTMPPGLATVTVRVKDMNDYSPVFSKTLYRGMV-- 935

Query: 154  IPLADLTPGSVIGKVEAAD----GDKGDRVTLS---LRGPYE-KMFSIND-SGH-ISIVD 203
                D   G+VI  V A D    G    RV      ++ PY   +F + + SG  ++ V+
Sbjct: 936  --APDAVKGTVITTVSAEDQDPPGTPASRVRYKVDVVQFPYSASIFDVEENSGRVVTRVN 993

Query: 204  LSALNTSTIQLVVVATDTGNP 224
            L+   ++  +LVV+A D G+P
Sbjct: 994  LNEEPSTVFKLVVIAYDDGDP 1014



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 56/112 (50%), Gaps = 8/112 (7%)

Query: 76  RVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDTLM---TTSATVNISV 132
           +V Y L+N +   F I+  G I     L+ E  D Y   V ATD  +    ++ T+ I V
Sbjct: 751 QVHYSLAN-FKNLFRITSNGSIYTAVKLNREVRDYYELIVEATDGAVDPRRSTLTLAIKV 809

Query: 133 VNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR 184
           ++++D  P F    Y + +P     +L PG+V  ++EA D D G  VT  +R
Sbjct: 810 LDIDDNSPVFTNASYSVLVPE----NLPPGTVFLQIEAKDVDLGSNVTYRIR 857


>gi|327270361|ref|XP_003219958.1| PREDICTED: hypothetical protein LOC100562617 [Anolis carolinensis]
          Length = 1666

 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 58/228 (25%), Positives = 105/228 (46%), Gaps = 20/228 (8%)

Query: 13  LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLL---TVTT 69
           LV+ A+      +   A ++VS    +     F+++ Y V+ LEN P+  +++    +  
Sbjct: 182 LVLTALDGGIPAKVGTAKIVVSVIDANDNPPVFNQSVYKVTLLENAPIGTLVIHLHAIDK 241

Query: 70  NKPRDLRVKYWLSNDYGER----FSISRQ-GDISLMQCLDYETEDSYRFTVYATDT---L 121
           ++  + +V Y+ S+   ++    FS+  Q G++ +M  +DYE + SY   V A D     
Sbjct: 242 DEGLNGKVSYFFSSHTPQKIRKIFSLGEQTGEVRVMGSVDYEEDTSYEIDVRAKDQGSPS 301

Query: 122 MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTL 181
           M T   V + + ++ND  P   +      +P     D  PG+  G +  +DGD G    +
Sbjct: 302 MDTHCNVLVEITDMNDNAPEIIFTSLTTTIPE----DAPPGTTAGLLRVSDGDSGGNGEI 357

Query: 182 SLRGPYEKMFSINDS--GHISIVDLSALNTSTI---QLVVVATDTGNP 224
            L    +  F I  S   H S++    L+   I   +LV+ A D+G+P
Sbjct: 358 QLHLTEDIPFQIVPSFKNHYSLITSGPLDREEISQYKLVLTAKDSGSP 405



 Score = 58.2 bits (139), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 76/275 (27%), Positives = 125/275 (45%), Gaps = 30/275 (10%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVT---TNKPRDLRVKYWL----SNDYGER----FSIS 92
            QF ++ Y V   EN PV  VLLTV+    +K ++ R+ Y +      ++GE      SI+
Sbjct: 1258 QFDRSFYEVVIEENNPVGMVLLTVSATDADKEQNSRLSYSILASQKQEFGEDPTTYVSIN 1317

Query: 93   -RQGDISLMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYP--- 145
               G+I      DYE  + + F V A D     +     V+I + + ND  P  R+P   
Sbjct: 1318 PTNGEIFAESPFDYEHTNHFEFQVEACDGGSPPLCNRIMVHIYLQDQNDNAPWIRFPFIG 1377

Query: 146  QYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSL---RGPYEKMFSIN-DSGHI-S 200
            Q  +    IPL+  +  ++I K+ A D D G    LS    +     +FS+   SG + +
Sbjct: 1378 QDSVVQFKIPLS-TSASALITKIMAVDLDSGRNAWLSYHLEQATDPSLFSMGLRSGEVRT 1436

Query: 201  IVDLSALNTSTIQLVVVATDTGNPPRQASVPAIMHFPEAIVQ-----QASSKLNSGTSS- 254
            +  +  L+  T +LV+V  D+G P    SV  I+   E+I +      A +  N G  + 
Sbjct: 1437 MRAIQELDNPTQELVLVVKDSGEPSMSTSVTVIVLLEESIPETFLGLTAHTVENEGPPTM 1496

Query: 255  TVLIILGVVLIVLGFVIILLILYIHKNKHTKNNGP 289
            TV +I+ +  I    +I L+ L +   +   +  P
Sbjct: 1497 TVYLIISLAAISTISLIALVALGVRCLRRDAHATP 1531



 Score = 46.6 bits (109), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 49/197 (24%), Positives = 83/197 (42%), Gaps = 20/197 (10%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGER----FSI-SRQGD 96
            F K  Y    +EN P   +++ +     ++  + +++Y LS+   E     F+I    G+
Sbjct: 1046 FEKATYYTRLVENSPPGTLVIKLNATDLDEGSNGQIQYSLSSHNSEALCRIFAIDGTTGE 1105

Query: 97   ISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
            I +   LD+E  + Y   V A D     M    ++ + V ++ND  P      +   L  
Sbjct: 1106 IRVQGNLDFEEANVYEIEVVARDMGSPTMEEHCSIMVEVTDINDNAPEVILTSFSSSLSE 1165

Query: 154  IPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSI-NDSGH-ISIVDLSALNTST 211
                D  PG+V+  +   D D GD+  +    P    F +  D  H  S++    L+  T
Sbjct: 1166 ----DAPPGTVVAVIHVKDKDSGDQGKVQCELPRNLPFKLRKDFEHQYSLLTSEQLDRET 1221

Query: 212  I---QLVVVATDTGNPP 225
            I    + + A D GNPP
Sbjct: 1222 IPRFNVTIYAFDLGNPP 1238



 Score = 45.8 bits (107), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 59/260 (22%), Positives = 111/260 (42%), Gaps = 29/260 (11%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWLSNDYGERFSISR-------Q 94
           FS+N Y+    EN P   +L TV  + P +    R+ Y +++   +   +S         
Sbjct: 427 FSQNFYTSFLKENNPPGSLLCTVVASDPDEGDNSRLTYSVADTLIQDAPLSSFVYINPDN 486

Query: 95  GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYP---QYE 148
           G+I      DYE     +  V   D     +++S TV + +++ ND  P   YP   Q  
Sbjct: 487 GNIYAQHSFDYEKLQVLQIPVTVRDAGSPPLSSSVTVYLFILDQNDNTPVVLYPVPGQEL 546

Query: 149 LFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSL----RGPYEKMFSIND-SGHI-SIV 202
             L  IP +    G V+ KV A D D G    LS     +     +F +   SG I ++ 
Sbjct: 547 STLQRIPQS-APAGYVVTKVTAVDADSGHNAWLSYSLLPQSTDPSLFQVAPYSGEIWTVR 605

Query: 203 DLSALNTSTIQLVVVATDTGNPPRQASVPAIMHFPEAIVQQASSKLN------SGTSSTV 256
           D    + +  +++V+  D G+PP   ++  ++   + + ++     N        +  T+
Sbjct: 606 DFQETDLTAQKILVLVKDNGDPPLSTTISILVSLEDKVFEERPQSHNFLIHPKEKSDLTL 665

Query: 257 LIILGVVLIVLGFVIILLIL 276
            +I+ +V + +  ++  +IL
Sbjct: 666 YLIIALVAVSIVSLVTFIIL 685



 Score = 44.7 bits (104), Expect = 0.079,   Method: Compositional matrix adjust.
 Identities = 45/143 (31%), Positives = 67/143 (46%), Gaps = 21/143 (14%)

Query: 103 LDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADL 159
           LD E    Y+  + A D+    +TT  T+ +++ +VND  P F    Y  FL      + 
Sbjct: 385 LDREEISQYKLVLTAKDSGSPSLTTDVTIVLNISDVNDNAPSFSQNFYTSFLKE----NN 440

Query: 160 TPGSVIGKVEAADGDKGD--RVTLSLR------GPYEKMFSIN-DSGHISI---VDLSAL 207
            PGS++  V A+D D+GD  R+T S+        P      IN D+G+I      D   L
Sbjct: 441 PPGSLLCTVVASDPDEGDNSRLTYSVADTLIQDAPLSSFVYINPDNGNIYAQHSFDYEKL 500

Query: 208 NTSTIQLVVVATDTGNPPRQASV 230
               +Q+ V   D G+PP  +SV
Sbjct: 501 Q--VLQIPVTVRDAGSPPLSSSV 521


>gi|326914508|ref|XP_003203567.1| PREDICTED: protocadherin Fat 3-like [Meleagris gallopavo]
          Length = 3426

 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 63/197 (31%), Positives = 92/197 (46%), Gaps = 17/197 (8%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPR---DLRVKYWLSNDYGERFSISRQ-GDISLM 100
            FS + Y+    EN     +L  V    P    + +V Y L++     FS+ R  G I L 
Sbjct: 2001 FSSDHYTACVYENTATKALLTRVQATDPDVGVNRKVTYSLADSADGYFSVDRSSGIIILE 2060

Query: 101  QCLDYETEDSYRFTVYATDT----LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
              LD E + SY  +V A+D      +++ ATV I+V+++ND  P F    Y + +P    
Sbjct: 2061 HPLDRELQSSYNISVKASDQSIVLTLSSFATVTITVLDINDNPPVFERRDYLVTVPE--- 2117

Query: 157  ADLTPGSVIGKVEAADGDKGD--RVTLSLRGPYEK-MFSIND-SGHISIVD-LSALNTST 211
             D +PG+ +  V A   D G    +T  +R   EK  F+IN  +G ISI + L   +   
Sbjct: 2118 -DTSPGTEVLSVFATSQDIGTNAEITYLIRSGNEKGKFNINSKTGAISISESLDYESCKD 2176

Query: 212  IQLVVVATDTGNPPRQA 228
              LVV A D G P   A
Sbjct: 2177 FYLVVEAKDGGTPALSA 2193



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 43/137 (31%), Positives = 60/137 (43%), Gaps = 8/137 (5%)

Query: 103  LDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPG 162
            LD E +D Y   + ATD L  T A V ++V +VND  P      Y    P     D+   
Sbjct: 1860 LDREEQDIYYLNITATDGLFVTQAAVEVTVTDVNDNSPVCEQVAYTALFPE----DIPSN 1915

Query: 163  SVIGKVEAADGDKGD--RVTLSLRGPYEKMFSIN-DSGHI-SIVDLSALNTSTIQLVVVA 218
             VI K+ A D D G    +  SL GP    F ++ ++G + S+  L         LV  A
Sbjct: 1916 KVILKISAKDADIGSNGEIRYSLYGPGNNKFFLDPENGELKSLAPLDREKIPVYNLVARA 1975

Query: 219  TDTGNPPRQASVPAIMH 235
            TD G    Q+ +  I+ 
Sbjct: 1976 TDGGGRFCQSEIHLILE 1992



 Score = 46.6 bits (109), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 56/202 (27%), Positives = 88/202 (43%), Gaps = 25/202 (12%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWL-SNDYGERFSIS-RQGDISLMQC 102
            F K  Y+ S  E++ ++  +L++    P    + Y +   D   +F+I    G +S++  
Sbjct: 1056 FDKPFYTASVNEDVEIHTPILSINATSPEGQGIIYIIVEGDPYNQFNIDFDTGVLSVISP 1115

Query: 103  LDYETEDSYRFTVYATDTLMTTSATVNISVV--NVNDWDPRFRYPQYELFLPHIPLADLT 160
            LDYE    ++  V A+D L    A V + +V  +VND  P F    Y         A L+
Sbjct: 1116 LDYEINSLFKLMVRASDALTGARAEVTVDLVINDVNDNPPVFDQSAYN--------ATLS 1167

Query: 161  PGSVIG----KVEAADGDKGDRVTLSLRGPYEKMFSINDSGHIS-----IVDLSALNTST 211
              S+IG    +V A D D  +   +  +   +  F+  D  HI      I+    L+   
Sbjct: 1168 EASLIGTPVLQVVATDADSDNNKIVQYQ-IVQDTFNSTDYFHIDSTSGLILTARMLDHEL 1226

Query: 212  IQ---LVVVATDTGNPPRQASV 230
            IQ   L V ATD G PP  + V
Sbjct: 1227 IQQCSLKVRATDNGFPPLSSEV 1248



 Score = 45.4 bits (106), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 53/197 (26%), Positives = 91/197 (46%), Gaps = 13/197 (6%)

Query: 45   FSKNEYSVSALENL-PVNYVLLTVTTNKP--RDLRVKYWL-SNDYGERFSI-SRQGDISL 99
            F + +Y V+  E+  P   VL    T++    +  + Y + S +   +F+I S+ G IS+
Sbjct: 2106 FERRDYLVTVPEDTSPGTEVLSVFATSQDIGTNAEITYLIRSGNEKGKFNINSKTGAISI 2165

Query: 100  MQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
             + LDYE+   +   V A D     ++   TVN++V +VND  P+F    Y   +     
Sbjct: 2166 SESLDYESCKDFYLVVEAKDGGTPALSAVTTVNVNVTDVNDNAPKFSQVVYSAVISED-- 2223

Query: 157  ADLTPGSVIGKVEAADGDKGDRVTLSL-RGPYEKMFSIN-DSGHISI-VDLSALNTSTIQ 213
            A +    ++   E  D     ++  S+  G  +  FS++  SG + +   L     S   
Sbjct: 2224 AAIGDSVIMLIAEDLDSPSNGQIHFSIVSGDQDNEFSVDPGSGLVKVKKKLDRERISGYS 2283

Query: 214  LVVVATDTGNPPRQASV 230
            LV+ A D+G PP  +SV
Sbjct: 2284 LVIQARDSGTPPLSSSV 2300



 Score = 42.7 bits (99), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 41/146 (28%), Positives = 71/146 (48%), Gaps = 17/146 (11%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLS-----NDYGERFSI-SRQG 95
            F    Y    +E +P+   L+ V     +   + +V Y L+         E F+I S  G
Sbjct: 1684 FETASYDAIIMEGMPIGTKLMQVKAVDVDSSANGQVTYTLAVESELEKITEAFTIDSNSG 1743

Query: 96   DISLMQCLDYETEDSYRFTVYATD---TLMTTSAT-VNISVVNVNDWDPRFRYPQYELFL 151
             IS ++ LD+E + ++ F V A+D   TL  +S T V+++V ++ND  P F   ++E++ 
Sbjct: 1744 WISTLKDLDHEKDPTFTFAVVASDLGETLSLSSTTLVSVAVTDINDNAPVF---EHEVYR 1800

Query: 152  PHIPLADLTPGSVIGKVEAADGDKGD 177
              +  +D  PG V+  +   D D  D
Sbjct: 1801 GSVKESD-PPGEVVAVLSTWDEDTSD 1825



 Score = 42.7 bits (99), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 41/177 (23%), Positives = 81/177 (45%), Gaps = 10/177 (5%)

Query: 13  LVVRAIQYDNQDRYALATL---IVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTT 69
           L ++A+      + + A L    + K   S   L F +  Y+ + +E+  V  ++  V+ 
Sbjct: 197 LTIKAVDNGRPQKSSTARLHIEWIKKPMPSPMPLTFDEPFYNFTVMESDKVTEIVGVVSV 256

Query: 70  NKPRDLRVKY-WLSNDYGERFSISRQ-GDISLMQCLDYETEDSYRFTVYATDTLMTTSAT 127
            +P ++ + +  +  +Y   F   +  G I + + LD E    Y  TV  TD     +  
Sbjct: 257 -QPSNIPLWFDIVGGNYDSSFDAEKGVGTIVIAKPLDAEQRSIYNMTVEVTDGTNIATTQ 315

Query: 128 VNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR 184
           V I V++ ND  P F  P Y++ +      D+ P + I ++EA D D+  +++ ++ 
Sbjct: 316 VFIKVLDNNDNGPEFSQPSYDVTISE----DILPDTEILQIEAIDRDEKHKLSYTIH 368



 Score = 42.0 bits (97), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 43/151 (28%), Positives = 67/151 (44%), Gaps = 19/151 (12%)

Query: 95  GDISLMQCLDYETEDSYRFTVYATDTL-MTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
           G I+  + LDYE    Y+  V AT+   M ++ATVNI +V+ ND  P F + QY      
Sbjct: 591 GVITSQKGLDYERASFYQLIVQATNMAGMASNATVNIQIVDENDNPPVFLFSQYSG---- 646

Query: 154 IPLADLTPGSVIGK--------VEAADGDKGDRVTLS---LRGPYEKMFSINDS-GHI-S 200
             +++  P + I +        + A D D      L    +    +K F+++ S G I +
Sbjct: 647 -SISEAAPINSIVRSTSNSPLVIRATDADSNQNALLVYQIVESTAKKYFTVDSSTGAIRT 705

Query: 201 IVDLSALNTSTIQLVVVATDTGNPPRQASVP 231
           I +L     +     V   D+GNP   A  P
Sbjct: 706 IANLDHETIAHFHFHVHVRDSGNPQLTAESP 736



 Score = 39.7 bits (91), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 41/155 (26%), Positives = 68/155 (43%), Gaps = 12/155 (7%)

Query: 76   RVKYWL--SNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVV 133
            R++Y +   ND       S+ G I+L        E  Y   V  +D L T++A V+I ++
Sbjct: 1298 RLEYSILSGNDRTSFIMDSKSGVITLSNHRKQRMEPMYSLNVSVSDGLFTSTAQVHIQIL 1357

Query: 134  NVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEK-M 190
              N + P F    Y   +      +  PG+ +  V+A DGD G   +++ S+   + K  
Sbjct: 1358 GANLYSPVFSQSVYVAEVRE----NAAPGTKVLHVKATDGDSGVYGQISYSIINDFAKDR 1413

Query: 191  FSINDSGHI---SIVDLSALNTSTIQLVVVATDTG 222
            F I+ +G I     +D      S I + + A D G
Sbjct: 1414 FLIDSNGQILTTERLDRENFLESDIGIFLRALDGG 1448


>gi|297484498|ref|XP_002694357.1| PREDICTED: protocadherin-23 [Bos taurus]
 gi|296478818|tpg|DAA20933.1| TPA: dachsous 2-like [Bos taurus]
          Length = 3360

 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 64/209 (30%), Positives = 99/209 (47%), Gaps = 29/209 (13%)

Query: 95   GDISLMQCLDYETEDSYRFTVYATDTL-MTTSATVNISVVNVNDWDPRFRYPQYELFLP- 152
            GDIS  Q LDYE ++ Y   V A D    T S  V + V  +++++P F   QY   LP 
Sbjct: 2820 GDISAQQVLDYENDNKYCLIVQAKDKADSTASVVVWVDVEGIDEFEPIFTQDQYFFSLPE 2879

Query: 153  --HIPLADLTPGSVIGKVEAADGDKG-DRVTL-SLRGPYEKMFSIND-------SGHISI 201
              H+         +IG+VEA+D D G D V L SL  P    FS+N        S  + +
Sbjct: 2880 KSHV-------RHLIGRVEASDADAGVDGVILYSLETP-SPFFSVNKTNGNIYLSRALPL 2931

Query: 202  VDLSALNTSTIQLVVVATDTGNPPRQASVPAIMHFPEAIVQQASSKLNSGTSSTVLIILG 261
            +        TI++ ++A       +  S    ++    +   +  K ++G++S+ LI L 
Sbjct: 2932 IKSQVGKEDTIEMKIIAHSPKLDSKFTSCTVFVN----VSFSSEGKHSAGSASSFLISLT 2987

Query: 262  V---VLIVLGFVIILLILYIHKNKHTKNN 287
            +   V ++L F+ I+LIL  HK K   NN
Sbjct: 2988 ISFLVFLLLVFIPIVLILK-HKQKDAINN 3015



 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 55/160 (34%), Positives = 75/160 (46%), Gaps = 13/160 (8%)

Query: 79   YWL--SNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYA---TDTL-MTTSATVNISV 132
            YWL  S D          G I L + LDYE+   Y F V+A    D L    S +V + V
Sbjct: 1110 YWLEPSTDSAAFGVHPFTGWIYLRRQLDYESTQMYNFRVFAWIPEDKLSQNASTSVTVHV 1169

Query: 133  VNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS-LRGPYEKMF 191
            ++ ND  P F +    L +   P+    P  VIGK+ A D D G    LS      EK F
Sbjct: 1170 LDENDNSPTFWHDVLFLKVQESPM----PQGVIGKITAIDRDSGKNGQLSYFLLSDEKFF 1225

Query: 192  SIN-DSGH-ISIVDLSALNTSTIQLVVVATDTGNPPRQAS 229
             +N ++G  IS V L     +  Q+ V+ +D G+PPR A+
Sbjct: 1226 KMNPNTGELISWVALDHEQRAHHQVAVLVSDHGSPPRSAT 1265



 Score = 51.2 bits (121), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 43/148 (29%), Positives = 75/148 (50%), Gaps = 11/148 (7%)

Query: 86   GERFSISRQ-GDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRY 144
            G +F+I R  G + L++ LD+E    Y   +  +D +  T  TV + V++VND  P F  
Sbjct: 2378 GTKFAIDRNTGVVVLVETLDFEEATKYELQIQISDLVHQTEGTVTVHVLDVNDNPPVFSQ 2437

Query: 145  PQYELFLPHIPLADLTP-GSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDS-GHISIV 202
              Y+     + +++L P G  +  + A D +  + +T  +     KMFS++ + G I  +
Sbjct: 2438 DSYQ-----VTISELVPLGHPVLTIVATDVESSENITYRILS-SSKMFSVDPTNGTIFTI 2491

Query: 203  DLSAL--NTSTIQLVVVATDTGNPPRQA 228
            +   L    STI+ +V A+D G P  +A
Sbjct: 2492 NPVFLMERKSTIRFLVEASDGGFPDLKA 2519



 Score = 45.4 bits (106), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 55/208 (26%), Positives = 95/208 (45%), Gaps = 28/208 (13%)

Query: 38   TSLRELQFSKNEYSVSALENLPVNYVLLTV------TTNKPRDLRVKYWLSNDYGERFSI 91
            T+L   +F + +Y+ S  E++P +  + TV       +++P   R+    S +    FSI
Sbjct: 857  TTLAPAEFERPKYTFSVYEDVPEDSPVGTVKAKESFNSSEPVFYRIS---SGNLDGTFSI 913

Query: 92   SRQ-GDISLMQCLDYETEDSYRFTVYAT--DTLMTTSATVNISVVNVNDWDPRFRYPQYE 148
                G I   + LD+E +     TV A    +   +S  VNI++++VND  P F     E
Sbjct: 914  HPWLGTIRTQKPLDHEAQPVVALTVQAQLGSSPACSSTEVNITIIDVNDNPPVFPKASDE 973

Query: 149  LFLPHIPLADLTPGSVIGKVEAADGDKG----DRVTLSLRGPYEKMFSINDSGHISIV-- 202
            + +       + PG+ + +  A D D G     R +++ + P   +FS+ D+G + +V  
Sbjct: 974  VTVSQ----SMLPGTALYRARAEDKDSGLNGLVRYSIARQSP--SLFSV-DAG-LGVVYL 1025

Query: 203  --DLSALNTSTIQLVVVATDTGNPPRQA 228
               LS        L +VA D G P R +
Sbjct: 1026 NRSLSGAQLQACTLTLVAQDLGVPSRAS 1053



 Score = 45.4 bits (106), Expect = 0.051,   Method: Compositional matrix adjust.
 Identities = 50/182 (27%), Positives = 81/182 (44%), Gaps = 17/182 (9%)

Query: 56   ENLPVNYVLLTVTTNKP---RDLRVKY-WLSNDYGERFSISRQ-GDISLMQCLDYETEDS 110
            E+  V  ++  +T   P   R+ RV +  LS +    F +    G ++    LDYE +  
Sbjct: 1618 EDAAVGSLVHHITAQDPDAGRNGRVTFSILSGNENMAFMLDESSGFLTTASPLDYEIKSQ 1677

Query: 111  YRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGK 167
            +  T+ A D     +++S T+ I+V++VND  P F+   YE  +      +  PG  + +
Sbjct: 1678 HILTLLALDGGTPTLSSSQTLTITVLDVNDEAPVFKQHLYEASVKE----NQNPGEFVTR 1733

Query: 168  VEAADGDKGDRVTLSLR---GPYEKMFSIN-DSGH-ISIVDLSALNTSTIQLVVVATDTG 222
            VEA D D G    L      G    +F IN D+G  ++   L       + L V+  D G
Sbjct: 1734 VEAVDRDSGINSKLQFEIMPGASFMLFQINSDTGEVVTAATLDREVQEVLTLRVLVHDGG 1793

Query: 223  NP 224
             P
Sbjct: 1794 AP 1795



 Score = 44.7 bits (104), Expect = 0.075,   Method: Compositional matrix adjust.
 Identities = 43/140 (30%), Positives = 68/140 (48%), Gaps = 13/140 (9%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDL----RVKYWL-SNDYGERFSISRQ-GDIS 98
            FS  EY V   E+ P    ++ V+ +  RD+     V Y+L S +  + F +  + G +S
Sbjct: 2653 FSSLEYYVHIKESTPPGSPIIVVSASD-RDVGSHAEVSYYLTSGNEKQHFCLEEKTGVLS 2711

Query: 99   LMQCLDYETEDSYRFTVYATDTLMT--TSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
            L++ LDYE    +  TV A+D      + A V ++V++ ND  P+F +P     +P    
Sbjct: 2712 LIKPLDYEETIKFILTVQASDEERKHFSFAIVFVNVLDDNDHAPQFMFPNLNCAVPE--- 2768

Query: 157  ADLTPGSVIGKVEAADGDKG 176
             +L   S I  V A D D G
Sbjct: 2769 -NLPVFSTICSVNALDFDAG 2787



 Score = 40.0 bits (92), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 53/228 (23%), Positives = 95/228 (41%), Gaps = 20/228 (8%)

Query: 10   PITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTT 69
            PI L ++A+      R     L++   G  +R + FS++ Y     EN      ++T+  
Sbjct: 2093 PIWLQLKAVDQGVPARTTTGLLVIHMEGEDVR-ISFSQHLYKGIVPENCEAGTSIVTIKA 2151

Query: 70   NKPRDLR--VKY--WLSNDYGERFSISRQGDISLMQ--CLDYETEDSYRFTVYATDTLMT 123
              P  +R  +KY  +  N+ G     S+ G++++ +   LD+E     +  V A      
Sbjct: 2152 FAPDSIRDSIKYSVFSGNEDGVFSLCSKSGEVTVKEPKFLDFEVRKEVQLIVLAESRGRK 2211

Query: 124  TSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS- 182
              + V + + ++ND  P F    Y++ +      +      I +V A D D G    +  
Sbjct: 2212 AYSKVAVFIQDLNDHPPHFEQSVYQVSVSEGQFYN----HHIVQVFATDLDSGSNGLVEY 2267

Query: 183  --LRGPYEKMFSINDSGHI----SIVDLSALNTSTIQLVVVATDTGNP 224
              L G    +F ++    +    +I+D     TST  L+V A D G P
Sbjct: 2268 SILSGNQGNVFQMDPLSGVLTASAILDYEY--TSTYSLIVQAMDKGMP 2313



 Score = 39.3 bits (90), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 44/158 (27%), Positives = 73/158 (46%), Gaps = 23/158 (14%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTT----NKPRDLRVKYWL-----SNDYG-------E 87
            +F+   Y++S  E+ PV   L+T +T        +  V+Y +      N++         
Sbjct: 2536 EFAIEYYNLSLSEDTPVGRTLVTFSTIDHDWTRENTHVEYSIISGNSQNNFHVETSFIHS 2595

Query: 88   RFSISRQGDISLMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRY 144
             +S  + G + L+  LD E   S+   + A D     +++SATV+I V++V+D  P F  
Sbjct: 2596 EYSYKQVGYLVLLHHLDREATASHELVLLAFDHGCPPLSSSATVSIEVLDVDDNPPAFSS 2655

Query: 145  PQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS 182
             +Y +   HI      PGS I  V A+D D G    +S
Sbjct: 2656 LEYYV---HIK-ESTPPGSPIIVVSASDRDVGSHAEVS 2689



 Score = 38.9 bits (89), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 49/98 (50%), Gaps = 10/98 (10%)

Query: 84  DYGERFSISRQ-GDISLMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWD 139
           + G  FSI  + G IS  + LD E +++    V A D     ++ +  V+I+V +VND +
Sbjct: 589 ECGPSFSIDPESGVISTTRSLDREAQEAIELRVVAHDLGEPPLSATCLVSIAVDDVNDNE 648

Query: 140 PRFRYPQYELFLP-HIPLADLTPGSVIGKVEAADGDKG 176
           P F    Y   LP H P+     G    +V+A+D D G
Sbjct: 649 PVFLKQVYNATLPEHAPV-----GHCFLQVKASDADAG 681



 Score = 38.1 bits (87), Expect = 7.6,   Method: Compositional matrix adjust.
 Identities = 45/151 (29%), Positives = 65/151 (43%), Gaps = 27/151 (17%)

Query: 103 LDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADL 159
           LD E+ D Y   + ATD     ++T  T+ + V ++ND  P F    Y   +        
Sbjct: 489 LDRESRDLYDLRLVATDAGLPPLSTEETLLLRVADLNDQPPLFSQEHYWASVSEA----A 544

Query: 160 TPGSVIGKVEAADGDKGD----RVTLSL------------RGPYE--KMFSIN-DSGHIS 200
            PG+++  V A+D D+      R+  +L            R P E    FSI+ +SG IS
Sbjct: 545 APGTMVLCVSASDADEPGTDHARLRYALLPLPALCNPETPRPPAECGPSFSIDPESGVIS 604

Query: 201 IV-DLSALNTSTIQLVVVATDTGNPPRQASV 230
               L       I+L VVA D G PP  A+ 
Sbjct: 605 TTRSLDREAQEAIELRVVAHDLGEPPLSATC 635


>gi|334349291|ref|XP_001365044.2| PREDICTED: cadherin-23, partial [Monodelphis domestica]
          Length = 3103

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 58/194 (29%), Positives = 85/194 (43%), Gaps = 18/194 (9%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWLSNDYGERFSIS-RQGDISLM 100
            F +  Y  S  E+ PV  V+LTVT           ++Y L +  G +F I+   GDI ++
Sbjct: 2149 FDQLSYQESVFEDTPVGTVILTVTATDADSGAFALIEYSLVDGEG-KFGINPTTGDIYVL 2207

Query: 101  QCLDYETEDSYRFTVYATDT-------LMTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
              LD ET+  Y  T  A D            S  V I V++VND  P+F  PQY   +  
Sbjct: 2208 SSLDRETKAHYILTALAKDNPGDIPSNRRENSVQVVIQVLDVNDCRPQFSKPQYSTSV-- 2265

Query: 154  IPLADLTPGSVIGKVEAADGDKGDRVTL--SLRGPYEKMFSINDSGHISIVDLSALNTST 211
                +   G+ +  + A D D+G+   L  S+ GP  + F ++    +        +   
Sbjct: 2266 --YENEPAGTSVITMMATDQDEGENGELAYSIEGPGVEAFQVDKDSGLVTTRRPLQSYER 2323

Query: 212  IQLVVVATDTGNPP 225
              L VVATD G PP
Sbjct: 2324 FNLTVVATDGGQPP 2337



 Score = 54.7 bits (130), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 61/209 (29%), Positives = 93/209 (44%), Gaps = 26/209 (12%)

Query: 45  FSKNEYSVSALENLPVNYVLLTV--TTNKPRDLRVKYWLSNDYGERFSISRQ-GDISLMQ 101
           FS+  Y+VS  EN+ V   +LTV  T N        Y+  +D  +RFS+ +  G I+L+ 
Sbjct: 207 FSQPLYNVSLYENVTVGTTILTVLATDNDAGTYGDVYYFLSDDSDRFSLDKDTGLITLIG 266

Query: 102 CLDYETEDSYRFTVYATDTL-MTTSATVNISVVNVNDWDPRFRYPQYELFL----PHIPL 156
            LDYE    +  T+ A D     T+  V ++V++VND  P F+   Y   L    P +  
Sbjct: 267 RLDYELIQRFTLTIIARDGGGEETTGRVRVNVLDVNDNIPTFQKDAYVGALRENEPSV-- 324

Query: 157 ADLTPGSVIGKVEAADGDKGDR-------VTLSLRGPYEKMFSINDSGHISI---VDLSA 206
                 + + ++ A D D           V  SL G Y  +        IS+   +D   
Sbjct: 325 ------TQLVRLRATDEDSPPNNQITYSIVNASLFGSYFDISVYEGYAVISVNRPLDYEQ 378

Query: 207 LNTSTIQLVVVATDTGNPPRQASVPAIMH 235
           +    I L V+A D GNPP  ++VP  + 
Sbjct: 379 IPNGMIYLSVMAKDAGNPPLNSTVPVTIE 407



 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 66/217 (30%), Positives = 98/217 (45%), Gaps = 42/217 (19%)

Query: 45  FSKNEYSVSALENLPVNY-VLLTVTTNKPRDLRVKYWLSNDYGE-----------RFSI- 91
           FSK  YSV+ +EN+     VL    T+  R        S +YG+           +F I 
Sbjct: 418 FSKPSYSVTVVENIMAGATVLFLNATDLDR--------SREYGQESIIYSLEGSSQFRIN 469

Query: 92  SRQGDISLMQCLDYETEDSYRFTVYATD-----TLMTTSATVNISVVNVNDWDPRFRYPQ 146
           +R G+I+    LD ET+  Y   V A D        T  ATVNI+++++ND  P ++   
Sbjct: 470 ARSGEITTTSLLDRETKSEYILIVRAVDGGVGHNQKTGIATVNITLLDINDNHPTWKDAP 529

Query: 147 YELFLPHIPLADLT-PGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSIND-SGHIS--- 200
           Y     +I L ++T P S +  V A D D  +  TL     P  K +SIN  +G I    
Sbjct: 530 Y-----YINLVEMTPPDSDVTTVVAVDPDLAENGTLVYSIHPPNKFYSINSTTGKIRTTN 584

Query: 201 -IVDLSALNTSTIQL----VVVATDTGNPPRQASVPA 232
            ++D    +    +L    +V  TD G PP +A+  A
Sbjct: 585 VMLDRENPDPEEAELMRKIIVSVTDCGTPPLRATSSA 621



 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 66/236 (27%), Positives = 111/236 (47%), Gaps = 30/236 (12%)

Query: 50  YSVSALENLPVNY--VLLTVTTNK-PRDLRVKYWLSN-DYGERFSIS-RQGDISLMQCLD 104
           Y+VS LE++P ++  V L  T N    +  + Y+++  +   +F I  R   +  +  LD
Sbjct: 747 YNVSLLEDIPRDFRVVWLNCTDNDVGLNAELSYFITGGNIDGKFKIGYRDAVVRTVVNLD 806

Query: 105 YETEDSYRFTVYATDT-----LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADL 159
            ET  +Y   V A D        T +AT+ ++V++VND  P F    YE  +P     D+
Sbjct: 807 RETTAAYTLIVEAIDNGPVGKRRTGTATIYVTVLDVNDNRPIFLQSSYEASVPE----DI 862

Query: 160 TPGSVIGKVEAADGDKGD--RVTLS-LRGPYEKMFSINDSGHISIVDLSALN---TSTIQ 213
             GS I ++ A D D+GD  RV    L G +   F I+ S  + +     L+    S+  
Sbjct: 863 PEGSSIVQLMATDADEGDNGRVWYRILHGNHGNNFRIHVSSGLLVRGPRPLDREQNSSHV 922

Query: 214 LVVVATDTGNPPRQASVPAIMHFPE------AIVQQASSKLN----SGTSSTVLII 259
           LVV A +    P ++SV  I++  +         QQ  S+L     +G  ++V+++
Sbjct: 923 LVVEAYNYDLGPMRSSVRVIVYVEDVNDEVPVFTQQQYSRLGLRETAGIGTSVIVV 978



 Score = 47.8 bits (112), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 56/197 (28%), Positives = 89/197 (45%), Gaps = 24/197 (12%)

Query: 44  QFSKNEYSVSALENLPVNYVL----LTVTTNKPRDLRVKYWLSNDYGERF-----SISRQ 94
           +F+ +EYSV+  E   V + L      V  ++  +   + +L  +    F     SI  +
Sbjct: 96  EFNSSEYSVAITELAQVGFALPLFIQVVDKDEGLNSMFEVYLVGNNSHHFIVSPTSIQGK 155

Query: 95  GDISL--MQCLDYETEDSYRFTVYATDTL--MTTSATVNISVVNVNDWDPRFRYPQYELF 150
            DI +   Q LDYET   Y F ++A +++      A V IS++N ND  P F  P Y + 
Sbjct: 156 ADIRMRVAQPLDYETVPRYEFDMFANESVPDHVGYAKVKISLINENDNRPIFSQPLYNVS 215

Query: 151 LPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDSGHISIVDLSALN 208
           L      ++T G+ I  V A D D G    V   L    ++     D+G I+++    L+
Sbjct: 216 L----YENVTVGTTILTVLATDNDAGTYGDVYYFLSDDSDRFSLDKDTGLITLI--GRLD 269

Query: 209 TSTIQ---LVVVATDTG 222
              IQ   L ++A D G
Sbjct: 270 YELIQRFTLTIIARDGG 286



 Score = 43.9 bits (102), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 66/282 (23%), Positives = 123/282 (43%), Gaps = 51/282 (18%)

Query: 4    EDDFL-QPITLVVRA----IQYDNQDRYALATLIVSK-----AGTSL-----RELQFSKN 48
            +D F+  P+T V+R     I  + Q+ Y L  +   +     +GT++      ++  S+ 
Sbjct: 1860 QDRFMIHPLTGVIRVGNITIDREEQESYRLVVVAADRGTVPLSGTAIITILIDDINDSRP 1919

Query: 49   EY-----SVSALENLPVNYVLLTVTTNKPRDL--RVKYWLSN------------DYGERF 89
            E+     +VS LE++    V+  VT    RDL   ++Y++ +            +  E F
Sbjct: 1920 EFINPIQTVSVLESVDPGTVIANVTAID-RDLNPELEYYIIDIVAKDDTDRLVPNQEEAF 1978

Query: 90   SIS-RQGDISLMQCLDYETEDSYRFTVYATD--------TLMTTSATVNISVVNVNDWDP 140
            +++   G + +   L+ E   +Y  T+   D         +   +A + +++++VND  P
Sbjct: 1979 AVNINTGSVMVKSPLNRELVATYEVTISVIDNASDLPENAVSVPNAKLTVNILDVNDNTP 2038

Query: 141  RFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMF-SINDSG 197
            +FR      +   I L   TPG+ +  V A D DKG   ++T +L       +  + DS 
Sbjct: 2039 QFRPFGITYYTERI-LEGATPGTTLIAVSAYDPDKGVNGQITYTLLNMVPPGYVQLEDSS 2097

Query: 198  HISIVDLSALNTSTIQLV---VVATDTGNPPRQASVPAIMHF 236
               I+    ++   +  V   V A D G+PPR A +P  +  
Sbjct: 2098 AGKIISKRTVDYEEVHWVNFTVQAADNGSPPRAAEIPVYLEI 2139



 Score = 43.9 bits (102), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 56/203 (27%), Positives = 89/203 (43%), Gaps = 23/203 (11%)

Query: 43   LQFSKNEYSVSALENLP-----VNYVLLTVTTNKPRDLRVKYWLSNDYGERFSI-SRQGD 96
            +QFS   Y  + +ENLP     V     ++    P   R   + S      F I S  G 
Sbjct: 1058 VQFSNASYEAAIMENLPWGSEVVRVQAFSIDNINPIVYRFDPYTSPQARALFKIDSVTGV 1117

Query: 97   ISLMQCLDYETEDSYRFTVYATDTLMTTSATVN--ISVVNVNDWDPRFRYPQYELFLPHI 154
            I++   +D E  D Y  TV A D      +TV   I+V++ ND  P+F  P  +  + ++
Sbjct: 1118 ITVKGLVDREKGDFYTLTVVADDGGPKIDSTVKVYITVLDENDNSPQFD-PTSDSAV-NV 1175

Query: 155  PLADLTPGSVIGKVEAADGDKGDRVTLS-------LRGPYEKMFSINDSGHISI---VDL 204
            P  D   G  +  V A D D G    +S       + G +E + S +  G + +   +D 
Sbjct: 1176 P-EDYAVGRRVAVVTARDADIGSNGQVSFYLASGNIGGAFEILTSNDSVGEVFVARPLDR 1234

Query: 205  SALNTSTIQLVVVATDTGNPPRQ 227
              L+   ++  +VA D G+PPR+
Sbjct: 1235 EELDHYILK--IVAIDGGSPPRK 1255


>gi|126322471|ref|XP_001379438.1| PREDICTED: cadherin-17 [Monodelphis domestica]
          Length = 848

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 79/280 (28%), Positives = 114/280 (40%), Gaps = 40/280 (14%)

Query: 14  VVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPR 73
           +V+ + Y N+  YA   L VS          FS+  Y    LEN  +N  L+ V    P 
Sbjct: 553 LVKEVHY-NESSYAHFFLKVSDVN---EPPVFSRALYQAQVLENADINTKLIMVNATDPE 608

Query: 74  DLRVKYWLSNDYGERFSISR-QGDISLMQCLDYETEDSYRFTVYATD---TLMTTSATVN 129
            L V Y LS D      I    G+I  M+ LD E   +Y+  V AT+   + +T+S   +
Sbjct: 609 GLPVSYSLSGDTQGWLRIDGVTGEIFTMKHLDREAAKNYQVKVIATEKGRSFLTSSVYFH 668

Query: 130 ISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGD----KGDRVTLSLRG 185
           +++++VND  PR     Y  F    PL     GSVI   EA D D    +G   T SL  
Sbjct: 669 LTLMDVNDNPPRL-VKDYTGFFFCYPLK--AKGSVI--FEATDDDQPPHRGFDFTFSLGS 723

Query: 186 ---PYEKMFSINDSGHISI-VDLSALNTSTIQLVVVATDTGNPPRQASVPAIMHFPEAIV 241
               Y+   S  +  H  +    +       Q+ V   D GNPP + +V     FP  + 
Sbjct: 724 EPLKYDWELSKINGTHAQLSTKHTNFEERVYQVYVKINDGGNPPLENTV----SFPVTMC 779

Query: 242 QQASSK---------------LNSGTSSTVLIILGVVLIV 266
                +               +  GT  T  I++GV+L V
Sbjct: 780 TCVDGRCYQPADTMPGMPTLGMAIGTLLTTFIVIGVILTV 819


>gi|229442259|gb|AAI72772.1| FAT tumor suppressor 1 precursor [synthetic construct]
          Length = 990

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/156 (26%), Positives = 78/156 (50%), Gaps = 11/156 (7%)

Query: 33  VSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWL---SNDYGERF 89
           +SK   SL  + F ++ ++ + +E+ PV +++  ++   P    +  W      +Y   F
Sbjct: 256 ISKPKPSLEPISFEESFFTFTVMESDPVAHMIGVISVEPPG---IPLWFDITGGNYDSHF 312

Query: 90  SISR-QGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYE 148
            + +  G I + + LD E + +Y  TV ATD   T    V I V++ ND  P+F   +YE
Sbjct: 313 DVDKGTGTIIVAKPLDAEQKSNYNLTVEATDGTTTILTQVFIKVIDTNDHRPQFSTSKYE 372

Query: 149 LFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR 184
           + +P     D  P + I ++ A D D+ +++  +L+
Sbjct: 373 VVIPE----DTAPETEILQISAVDQDEKNKLIYTLQ 404


>gi|158297323|ref|XP_317578.4| AGAP007905-PA [Anopheles gambiae str. PEST]
 gi|157015140|gb|EAA12903.4| AGAP007905-PA [Anopheles gambiae str. PEST]
          Length = 2864

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 72/260 (27%), Positives = 113/260 (43%), Gaps = 48/260 (18%)

Query: 14  VVRAIQYDNQDRYALATLIVSKAGTS--------LRELQ--------FSKNEYSVSALEN 57
           + R + Y++  R+ L  +  S +GT         L E+Q        F KNEY++S +E+
Sbjct: 363 LARPLDYESMQRHTLV-VTASDSGTPSLSTNLTILVEVQDVNDNAPIFEKNEYAISVIES 421

Query: 58  LPVNYVLLTVT---TNKPRDLRVKYWLSNDYGERFSISRQ------------------GD 96
            P N  +L V+    +   + R+ Y +  +  +R   S Q                  G 
Sbjct: 422 TPSNSQILQVSATDADTGNNARLTYKILGEDHQRTGKSTQPASPDEPVAEIFGIFPNSGW 481

Query: 97  ISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
           I L   LD E ++ Y  TV  +D     +T +A V +++++ ND  P F    YE  +  
Sbjct: 482 IYLRTKLDREVKERYNITVIVSDNGVPTLTATAHVIVTILDANDNSPIFAKSLYEFEIEE 541

Query: 154 IPLADLTPGSVIGKVEAADGDKG-DRVTLSLRGPYEKMFSIND-SGHISIVD-LSALNTS 210
               ++  G++IG V A+D D G + V      P    F IN  SG I+  D L     +
Sbjct: 542 ----NMRRGAMIGTVSASDSDAGINAVVRYSLIPSNTSFQINPVSGEITTRDSLDRETKA 597

Query: 211 TIQLVVVATDTGNPPRQASV 230
           +  LVV A D G P R + V
Sbjct: 598 SYDLVVEARDQGTPYRSSRV 617



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 62/193 (32%), Positives = 86/193 (44%), Gaps = 25/193 (12%)

Query: 52   VSALENLPVNYVLLTVT-----TNKPRDLRVKYWLSNDYGERFSISR-QGDISLMQCLDY 105
            +S  E   V  VL T+T     TN P          +D    FSI R  G I L++ LDY
Sbjct: 1750 ISVSEATSVGTVLTTITANDVDTNPPLTYSFAELSDDDATSYFSIDRYSGKIILIRPLDY 1809

Query: 106  ETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGS-- 163
            E    +   + A+D+      T+ + VV+VND  P F+   Y     H  L+D T GS  
Sbjct: 1810 EDRHEFLLRLLASDSAHVARTTLTVRVVDVNDNAPVFQQITY-----HAMLSDSTDGSNT 1864

Query: 164  --VIGKVEAADGDKGDR--VTLSLRGP----YEKMFSINDSGHISIVDLSALNTS----T 211
              +I  V A D D      V  S+  P        F+I++S      ++S L+TS    T
Sbjct: 1865 NVMILSVNATDADSEPNAIVRYSIVPPKGMVMASGFTIDESTGQLFANVSQLSTSGAGGT 1924

Query: 212  IQLVVVATDTGNP 224
            + L V ATD+G P
Sbjct: 1925 LYLTVRATDSGQP 1937



 Score = 51.2 bits (121), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 60/205 (29%), Positives = 95/205 (46%), Gaps = 31/205 (15%)

Query: 56   ENLPVNYVLLTVT---TNKPRDLRVKYWLSN----DYGERFSI-SRQGDISLMQCLDYET 107
            E+ PV  ++   T    +   +  +KY LS        E F+I S  G ++L+  LD+E 
Sbjct: 870  EDTPVGAIVYNFTVQDNDTGTNAEIKYNLSKPAHLAQKEYFAIDSLTGSLTLLAPLDHED 929

Query: 108  EDSYRFTVYATDT------LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTP 161
               +   V ATD        +TTSAT  I V +VND  P+F  PQ    + +I  + L  
Sbjct: 930  TQEFLLIVQATDQSSNVTERLTTSATARIMVTDVNDNSPKFVIPQAADGVVYISDS-LEI 988

Query: 162  GSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSINDSGHI----------SIVDLSALN 208
              V+  V A D D G+   ++   + G  ++ F+I+ S  +           I+D    N
Sbjct: 989  DQVVSHVVAIDPDSGENGHIAYTFVGGNEDERFTIDSSTGVIRLAKPFSSNFIMDSGKRN 1048

Query: 209  --TSTIQLVVVATDTGNP-PRQASV 230
              +   QLV+ A+D G+P PR+A +
Sbjct: 1049 SVSGKYQLVISASDHGSPRPREAKM 1073



 Score = 48.5 bits (114), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 46/145 (31%), Positives = 71/145 (48%), Gaps = 16/145 (11%)

Query: 95  GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFL 151
           G+I+    LD ET+ SY   V A D      ++  +V + +++VND  P    PQ ++  
Sbjct: 583 GEITTRDSLDRETKASYDLVVEARDQGTPYRSSRVSVKVQILDVNDNAPDIVDPQEDV-- 640

Query: 152 PHIPLADLTP-GSVIGKVEAADGDKGDRVTLS---LRGPYEK---MFSIND-SGHI-SIV 202
             + + +  P G+ + KV A D D G   ++S   L+G       MFSI+  SG I +  
Sbjct: 641 --VSVREEQPIGTEVVKVRAIDRDHGQNASISYSILKGRDSDGYGMFSIDPMSGVIRTKT 698

Query: 203 DLSALNTSTIQLVVVATDTGNPPRQ 227
            L     +  +L V ATD G PP+Q
Sbjct: 699 SLDHEEKTIYRLAVAATDNGKPPKQ 723



 Score = 48.1 bits (113), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 40/113 (35%), Positives = 56/113 (49%), Gaps = 6/113 (5%)

Query: 77  VKYWLSNDYGE--RFSIS-RQGDISLMQCLDYETEDSYRFTVYATDT-LMTTSATVNISV 132
           V Y L   Y +   F I    G++ +   LDYET +SY F + ATD   ++T+A V I +
Sbjct: 14  VNYTLGEGYKKNAEFEIRPSTGEVCIASELDYETRNSYEFPIIATDRGGLSTTAMVKIQL 73

Query: 133 VNVNDWDPRFRYPQYELFLPH-IPLADLTPGSVIGKVEAADGDKGDRVTLSLR 184
            +VND  P F   +Y + L   +P   L    V+  V A D D G   T+S R
Sbjct: 74  TDVNDNRPTFYPREYNVSLRESMPTNSLLSTPVV-VVVATDSDSGSFGTISYR 125



 Score = 47.8 bits (112), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 54/199 (27%), Positives = 85/199 (42%), Gaps = 21/199 (10%)

Query: 12   TLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTV---- 67
            +LVVRA    +  R ++    ++ +  +  E QF   EY     EN P+   + T     
Sbjct: 2149 SLVVRACDSHSAPRCSVHPFTIALSDENDNEPQFPVPEYLEFVGENEPIGISIFTARATD 2208

Query: 68   -------TTNKPRD--LRVKYWLSNDYGERFSIS-RQGDISLMQCLDYETEDSYRFTVYA 117
                   T N   D  L   Y   +D  + F +    G ++     DYE ++ Y F + A
Sbjct: 2209 MDRGPFGTVNYTIDSVLSGAYSGLDDSWKLFKVDPTSGVVNSNAVFDYEEKNRYAFALRA 2268

Query: 118  TDTLMTTSATVNISVV--NVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDK 175
            TDT    S TV + +V  + +++ P+F    Y   +       L  G V+G V A D D+
Sbjct: 2269 TDT-GGKSKTVRVKIVIESRDEFSPQFTERTYRFVIKTPESGQLPVGYVVGHVTATDRDR 2327

Query: 176  G--DRVT--LSLRGPYEKM 190
            G   R+   L+ + PY KM
Sbjct: 2328 GPDGRIVYQLTTQHPYFKM 2346



 Score = 47.0 bits (110), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 57/216 (26%), Positives = 97/216 (44%), Gaps = 26/216 (12%)

Query: 29  ATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVT---TNKPRDLRVKYWL-SND 84
           A + +S    + R   F K  Y+    E++  N V+ TV+   +N      ++Y++ S D
Sbjct: 178 AEVFISVIDATQRPPIFDKPRYTYYVKEDVKRNTVVGTVSATSSNSGNRGSLRYFIYSGD 237

Query: 85  YGERFSISR-QGDISLMQCLDYETEDSYRFTVYAT--DTLMTTSATVNISVVNVNDWDPR 141
               F+I    G+I +   LD+ET+      + AT  D        VNI + +VND  P 
Sbjct: 238 PDGFFAIDPVSGNIRVANALDHETKPQVLLNIQATSGDPPAYGHTQVNIDIEDVNDNPPE 297

Query: 142 FRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTL---------SLRGPYEKMFS 192
           F      + +P     ++  GS + +  A D D G    +         +L G    +FS
Sbjct: 298 FESNTVRISVPE----NVEIGSPLYEANAQDKDSGMSGVITYMLAGQGNTLSGARSSLFS 353

Query: 193 IND-SGHISI---VDLSALNTSTIQLVVVATDTGNP 224
           ++  SGH+++   +D  ++   T  LVV A+D+G P
Sbjct: 354 MDSRSGHLTLARPLDYESMQRHT--LVVTASDSGTP 387



 Score = 45.8 bits (107), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 57/200 (28%), Positives = 89/200 (44%), Gaps = 19/200 (9%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGERFSI-SRQGDISL 99
            +F   +Y  +  E+  +   +LTV     +   + R+ Y L+N     F I S+ G I+ 
Sbjct: 1314 KFELQKYIATIDEDAQIGTTVLTVKAIDADVGINARIVYSLANVTEWLFDIDSKTGVITT 1373

Query: 100  MQCLDYETEDSYRFTVYATDTLMTTSATVNISV----VNVNDWDPRF-RYPQYELFLPHI 154
                D E ++ Y F V A D     + + N+ V     +VND  P F +YP    F   I
Sbjct: 1374 AGLFDRERQNVYNFMVVAMDGGRYNARSQNVPVQVIIADVNDNKPVFDKYP----FREQI 1429

Query: 155  PLADLTPGSVIGKVEAADGDKGD--RVTLSL-RGPYEKMFSIN-DSGHISIVD-LSALNT 209
              A + PG  +  + A D D+G    +  SL        F IN  +G +S    L++ N 
Sbjct: 1430 G-ALVQPGQTLLHISATDSDQGSNGEIVYSLNENASNGKFRINPTTGALSATQSLASENG 1488

Query: 210  STIQLVVVATDTGNPPRQAS 229
              + + V A D GNPP+ A+
Sbjct: 1489 RLLHIEVTARDKGNPPQIAT 1508



 Score = 42.7 bits (99), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 57/245 (23%), Positives = 105/245 (42%), Gaps = 37/245 (15%)

Query: 13  LVVRAIQYDNQDRYALATLIVSKAG---TSLRELQ----------FSKNEYSVSALENLP 59
            +   + Y+ ++ Y    +   + G   T++ ++Q          F   EY+VS  E++P
Sbjct: 38  CIASELDYETRNSYEFPIIATDRGGLSTTAMVKIQLTDVNDNRPTFYPREYNVSLRESMP 97

Query: 60  VNYVLLT-----VTTNKPRD----LRVKYWLSNDYGERFSISR-QGDISLMQ--CLDYET 107
            N +L T     V T+        +  +    N+ G  F + R  G+I + +   L   T
Sbjct: 98  TNSLLSTPVVVVVATDSDSGSFGTISYRIVAGNEAG-IFRMDRLTGEIFVTRPNMLSSRT 156

Query: 108 EDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSV 164
           +  +R  + A+D      T  A V ISV++     P F  P+Y  ++      D+   +V
Sbjct: 157 QPYHRLNISASDGGGLRSTHDAEVFISVIDATQRPPIFDKPRYTYYVKE----DVKRNTV 212

Query: 165 IGKVEAADGDKGDRVTLS---LRGPYEKMFSIND-SGHISIVDLSALNTSTIQLVVVATD 220
           +G V A   + G+R +L      G  +  F+I+  SG+I + +     T    L+ +   
Sbjct: 213 VGTVSATSSNSGNRGSLRYFIYSGDPDGFFAIDPVSGNIRVANALDHETKPQVLLNIQAT 272

Query: 221 TGNPP 225
           +G+PP
Sbjct: 273 SGDPP 277



 Score = 41.6 bits (96), Expect = 0.67,   Method: Compositional matrix adjust.
 Identities = 35/109 (32%), Positives = 56/109 (51%), Gaps = 10/109 (9%)

Query: 81  LSNDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVN 136
           LS      FS+ SR G ++L + LDYE+   +   V A+D+    ++T+ T+ + V +VN
Sbjct: 344 LSGARSSLFSMDSRSGHLTLARPLDYESMQRHTLVVTASDSGTPSLSTNLTILVEVQDVN 403

Query: 137 DWDPRFRYPQYELFLPHIPLADLTPG-SVIGKVEAADGDKGDRVTLSLR 184
           D  P F   +Y      I + + TP  S I +V A D D G+   L+ +
Sbjct: 404 DNAPIFEKNEYA-----ISVIESTPSNSQILQVSATDADTGNNARLTYK 447


>gi|444728966|gb|ELW69398.1| Protocadherin-15 [Tupaia chinensis]
          Length = 2019

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 64/213 (30%), Positives = 104/213 (48%), Gaps = 17/213 (7%)

Query: 26  YALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDY 85
           Y+L      + G  L  LQ     YS+   E + +  VLL +         + Y + N  
Sbjct: 669 YSLEISEAMRIGAVLLNLQLM---YSLEISEAMRIGAVLLNLQATDREGDPITYAIENGD 725

Query: 86  GER-FSISRQ-GDISLMQCLDYETEDSYRFTVYATDTL--MTTSATVNISVVNVNDWDPR 141
            +R F++S   G ++L + LD E+ D Y   + A+D     T++ATVNI V +VN     
Sbjct: 726 PQRVFNLSETTGILTLGKALDRESTDRYILIITASDGRPDGTSTATVNIVVTDVN----- 780

Query: 142 FRYPQYELFLP-HIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDSGH 198
           F  P ++ +LP ++ + +    + +G+V A D D G   +V  SL G +  +F I  +G 
Sbjct: 781 FNAPVFDPYLPRNLSVVEEEANAFVGQVRATDPDAGINGQVHYSL-GNFNNLFRITSNGS 839

Query: 199 I-SIVDLSALNTSTIQLVVVATDTGNPPRQASV 230
           I + V L+       +LVVVATD    PR +++
Sbjct: 840 IYTAVKLNREVRDYYELVVVATDGAVHPRHSTL 872



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 64/241 (26%), Positives = 110/241 (45%), Gaps = 27/241 (11%)

Query: 6   DFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVL- 64
           DF Q   LV++A Q +     A A+L +     + +   F+   Y    LE+ PV   + 
Sbjct: 404 DFHQKFDLVIKAEQDNGHPLPAFASLHIEILDENNQSPYFTMPSYQGYILESAPVGATIS 463

Query: 65  --LTVTT-----------NKPRDLRVKYWLSNDYGERFSISRQG---DISLMQCLDYETE 108
             L +TT              +D  +  +L NDY   F++++ G    ++L+Q +D E +
Sbjct: 464 DSLNLTTPLRIVALDKDIEDTKDPELHLFL-NDYTSVFTVTQTGITRFLTLLQPVDREEQ 522

Query: 109 DSYRFTVYATDTLMTTSAT-VNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGK 167
            +Y F++ A D +  +    VNI V++ ND  P F    Y++++      D++PG  + +
Sbjct: 523 QTYTFSITAFDGVQESEPVIVNIRVMDANDNTPTFPEISYDVYV----YTDMSPGDSVIQ 578

Query: 168 VEAADGDKGD--RVTLSLRGPYEKMFSIND-SGHISIV-DLSALNTSTIQLVVVATDTGN 223
           + A D D+G    +T  +    +  F IN  +G ISI   +  +   T  L V A D   
Sbjct: 579 LTAVDADEGSNGEITYEILAGAQGDFIINKTTGLISIAPGVELIVGRTYALTVQAADNAP 638

Query: 224 P 224
           P
Sbjct: 639 P 639



 Score = 51.6 bits (122), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 72/233 (30%), Positives = 102/233 (43%), Gaps = 26/233 (11%)

Query: 13   LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKP 72
            LVV A       R++  TL V           F+ + Y+V   ENLP     L +   K 
Sbjct: 856  LVVVATDGAVHPRHSTLTLAVKVLDIDDNSPVFTNSTYTVVVEENLPAGTTFLQIEA-KD 914

Query: 73   RDL--RVKYWLSNDYGERFSISR--QGDISLMQCLDYET----EDSYRFTVYATD---TL 121
             DL   V Y + +   + F       G++SL++ LDYE     E S  F V A D   T+
Sbjct: 915  VDLGANVSYRIRSPEVKHFFALHPFTGELSLLRSLDYEAFPDQEASITFLVEAFDIYGTM 974

Query: 122  MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDK----GD 177
                ATV + V ++ND+ P F    Y+  +      D   G+ I  V A D D       
Sbjct: 975  PPGIATVTVIVKDMNDYPPVFSKRIYKGMV----APDAVKGTPITTVYAEDADPPGLPAS 1030

Query: 178  RVTL---SLRGPY-EKMFSIN-DSGH-ISIVDLSALNTSTIQLVVVATDTGNP 224
            RV      ++ PY   +F +  DSG  I+ V+L+   T+  +LVVVA D G P
Sbjct: 1031 RVRYRVDDVQFPYPASIFDVEEDSGRVITRVNLNEEPTTIFKLVVVAFDEGEP 1083



 Score = 43.9 bits (102), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 34/119 (28%), Positives = 55/119 (46%), Gaps = 8/119 (6%)

Query: 76  RVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDTLMT---TSATVNISV 132
           +V Y L N +   F I+  G I     L+ E  D Y   V ATD  +    ++ T+ + V
Sbjct: 820 QVHYSLGN-FNNLFRITSNGSIYTAVKLNREVRDYYELVVVATDGAVHPRHSTLTLAVKV 878

Query: 133 VNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMF 191
           ++++D  P F    Y + +      +L  G+   ++EA D D G  V+  +R P  K F
Sbjct: 879 LDIDDNSPVFTNSTYTVVVEE----NLPAGTTFLQIEAKDVDLGANVSYRIRSPEVKHF 933


>gi|432879582|ref|XP_004073498.1| PREDICTED: uncharacterized protein LOC101171591 [Oryzias latipes]
          Length = 3795

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 64/234 (27%), Positives = 106/234 (45%), Gaps = 23/234 (9%)

Query: 13   LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTT--- 69
            LV+ AI      +    T+IV+    +     FS++ YSV+  EN P+   +L V     
Sbjct: 3218 LVLTAIDGGKPPKSGEVTIIVNVLDVNDNAPVFSRDVYSVTLEENSPIGSTVLKVNASDL 3277

Query: 70   NKPRDLRVKYWLSNDYGERFSI-----SRQGDISLMQCLDYETEDSYRFTVYATDTLMTT 124
            ++ R+  V Y  SN    +F       +  G+I+++  +DYE  D Y+  + A+D  +  
Sbjct: 3278 DEGRNGEVVYSFSNSVNPKFLKFFEINANTGEITVIGSIDYEERDKYQIDIQASDKAVAP 3337

Query: 125  SAT---VNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG--DRV 179
             A+   V IS+++VND  P      +   +P     D  PG+ +  +   D D G   +V
Sbjct: 3338 LASQKGVVISIIDVNDNVPEIEITSFSSSVPE----DSKPGTTVALISINDQDSGLNGKV 3393

Query: 180  TLSLRG--PYEKMFSINDSGHISIVDLSALN---TSTIQLVVVATDTGNPPRQA 228
              S+ G  P+    S+ D  + S+V  S L+    S   + VVA D G P   +
Sbjct: 3394 VCSVDGETPFNLSPSVQDRMY-SLVTKSQLDREKQSQYSITVVAKDAGQPAHSS 3446



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/198 (25%), Positives = 90/198 (45%), Gaps = 21/198 (10%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDL---RVKYWLSNDYGER----FSISRQ-GD 96
            F++++YSV+  EN P    ++ V  +   D     V Y  +N         F ++ + G+
Sbjct: 986  FNEDDYSVTLKENAPTGTTVIQVNASDLDDGTNGEVVYSFTNSVNTNILRLFGLNTETGE 1045

Query: 97   ISLMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
            I++   +DYE +D Y   + A+D     +TT  +V I +++VND  P   +  +   +P 
Sbjct: 1046 ITVKGQIDYEEKDKYEIEIQASDKGTVPLTTEKSVKIKIIDVNDNTPEIEFTSFSSSIPE 1105

Query: 154  IPLADLTPGSVIGKVEAADGDKG--DRVTLSLRG--PYEKMFSINDSGHISIVD--LSAL 207
                D   G+ +  V  +D D G   +V+ S+    P++   S+ D     ++   L   
Sbjct: 1106 ----DARTGTTVALVSLSDLDSGLNGKVSCSIDKIVPFDLSQSVEDKMFSLVIKAPLDRE 1161

Query: 208  NTSTIQLVVVATDTGNPP 225
              S   L ++A D G PP
Sbjct: 1162 KQSIYDLTIIAKDAGQPP 1179



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 48/145 (33%), Positives = 70/145 (48%), Gaps = 19/145 (13%)

Query: 100  MQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
            M  LD E    Y  T+ A D+     T   T+N+ V +VND  P F    Y  ++     
Sbjct: 1942 MSQLDREITPHYDLTIIAKDSGDPSFTVEKTINVVVSDVNDNFPEFSMSPYTFYITE--- 1998

Query: 157  ADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSIND-SGHISI----VDLSALNT-- 209
             +  PG+ +  V+A D D+G+   +S  G   +M S N  S  +SI     D+SAL +  
Sbjct: 1999 -NNIPGASVFSVKAFDRDEGENALVSY-GILREMNSDNKLSSFLSINSETGDISALKSFD 2056

Query: 210  ----STIQLVVVATDTGNPPRQASV 230
                 T Q  VVATD+G+PP  ++V
Sbjct: 2057 FESVKTFQFHVVATDSGSPPLSSNV 2081



 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 48/202 (23%), Positives = 94/202 (46%), Gaps = 31/202 (15%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYG----ERFSISRQ-GD 96
           F+K  YS    EN+P++ V++ V     +K  +  + Y   N+      E FS++++ G+
Sbjct: 243 FTKETYSAKIRENIPIDTVVIQVNATDLDKGANAEIVYSFGNEVKSKITELFSMNKKTGE 302

Query: 97  ISLMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
           I++   +D+E   S+   V A+D     +T+  +V I+V++VND  P      +   +  
Sbjct: 303 ITVKGQIDFEKSKSFEIDVQASDNGNAPLTSDKSVKINVIDVNDNPPEIEVTSFSNSIKE 362

Query: 154 IPLADLTPGSVIGKVEAADGDKG--DRVTLSLRG--PY-------EKMFSINDSGHISIV 202
               D   G+ +  +   D D G   +V  +++   P+       E MF++     +S+ 
Sbjct: 363 ----DSKIGTTVALISVRDSDSGINGKVICTIKQDVPFTLSTSLKENMFAV-----VSMS 413

Query: 203 DLSALNTSTIQLVVVATDTGNP 224
            L    T    + ++A D+G+P
Sbjct: 414 HLDREITPHYDVTIIAKDSGDP 435



 Score = 51.2 bits (121), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 67/148 (45%), Gaps = 25/148 (16%)

Query: 100 MQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
           M  LD E    Y  T+ A D+     T   T+N+ V +VND  P F    Y  ++     
Sbjct: 412 MSHLDREITPHYDVTIIAKDSGDPSFTVEKTINVVVSDVNDNFPEFSMSPYTFYITE--- 468

Query: 157 ADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSGHISIV--------DLSALN 208
            +  PG+ +  V+A D D+G+   +S    Y  +  IN    +S          D+SAL 
Sbjct: 469 -NNIPGASVFSVKAFDRDEGENALVS----YGILREINSDNKLSSFLSINSETGDISALK 523

Query: 209 T------STIQLVVVATDTGNPPRQASV 230
           +       T Q  VVATD+G+PP  ++V
Sbjct: 524 SFDFESVKTFQFHVVATDSGSPPLSSNV 551



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 38/143 (26%), Positives = 63/143 (44%), Gaps = 15/143 (10%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYG----ERFSISR-QGD 96
            FS++ Y     EN PV   ++ V+    ++  +  + Y   ND      E F ++   G 
Sbjct: 2531 FSQDSYVAHLKENAPVGTTVIQVSATDLDESSNGEIVYSFGNDVDPKVRELFDLNGITGV 2590

Query: 97   ISLMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
            I+++  +D+E  D Y   + A+D     +    TVNI +V++ND  P      +   LP 
Sbjct: 2591 ITVIGIIDFEVNDKYELDIQASDRGAATLKAEKTVNIIIVDLNDNPPVIEVTSFSRALPE 2650

Query: 154  IPLADLTPGSVIGKVEAADGDKG 176
                D  PGS +  +   D D G
Sbjct: 2651 ----DSKPGSTVALISVKDSDSG 2669



 Score = 48.9 bits (115), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 48/202 (23%), Positives = 92/202 (45%), Gaps = 31/202 (15%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYG----ERFSIS-RQGD 96
            F+K  YS +  EN+P+  V++ V     +K  +  + Y   N+      E FS++ + G+
Sbjct: 1773 FTKETYSATIKENIPIGTVVIQVNATDLDKGANAEIIYSFGNEVKSKITELFSMNDKTGE 1832

Query: 97   ISLMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
            I++   +D+E    Y   V A+D     +T+  +V I+V++VND  P      +   +  
Sbjct: 1833 ITVKGQIDFEKNKIYEIDVQASDKGPVPLTSDKSVKINVIDVNDNPPEIEVTSFSNSIKE 1892

Query: 154  IPLADLTPGSVIGKVEAADGDKG--DRVTLSLRG--PY-------EKMFSINDSGHISIV 202
                D   G+ +  +   D D G   +V  +++   P+       E +F++     +S+ 
Sbjct: 1893 ----DSKIGTTVALISVRDSDSGINGKVICTIKQDVPFTLSPSLKENLFAV-----VSMS 1943

Query: 203  DLSALNTSTIQLVVVATDTGNP 224
             L    T    L ++A D+G+P
Sbjct: 1944 QLDREITPHYDLTIIAKDSGDP 1965



 Score = 47.4 bits (111), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 40/141 (28%), Positives = 66/141 (46%), Gaps = 17/141 (12%)

Query: 103  LDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADL 159
            LD E +  Y  TV A D      ++  T+N+ + +VND +P F    Y  +         
Sbjct: 3422 LDREKQSQYSITVVAKDAGQPAHSSEKTINVVISDVNDNNPEFSIRPYIFYASE----GN 3477

Query: 160  TPGSVIGKVEAADGDKGD--RVTLSL------RGPYEKMFSIN-DSGHI-SIVDLSALNT 209
             PG+V+  ++A D D+ +  R+T  +              +IN DSG + ++      + 
Sbjct: 3478 EPGAVLFSIKAFDHDESENARITYHIVRDGNDNSKLVSFLNINSDSGEVVALKSFDFESV 3537

Query: 210  STIQLVVVATDTGNPPRQASV 230
             T Q  VVATD+G+PP  ++V
Sbjct: 3538 KTFQFYVVATDSGSPPLSSNV 3558



 Score = 45.4 bits (106), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 50/204 (24%), Positives = 99/204 (48%), Gaps = 21/204 (10%)

Query: 92   SRQGDISLMQCLDYETEDSYRFTVYATDTL---MTTSATVNISVVNVNDWDPRFRYP--- 145
            S  G+I  ++  D+E+  +++F V ATD+    ++++ TVN+ +++ ND  P   YP   
Sbjct: 1257 SDSGEIVALKSFDFESVKTFQFHVVATDSGSPPLSSNVTVNVFILDQNDNAPVILYPVSS 1316

Query: 146  -QYELFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYE-KMFSIND-SGHI- 199
                  +  IP  ++  G ++ KV A D D G    +  SL+   +  +F+++  +G I 
Sbjct: 1317 NGSAEGVEEIP-RNVNAGHLVTKVRAYDADIGYNGWLLFSLQQVTDHSLFALDRYTGQIR 1375

Query: 200  SIVDLSALNTSTIQLVVVATDTGNPPRQASVPAIMHFPEAIVQQASSKLNSGTSST---- 255
            ++   +  + +  +L+++  D GN    A+   I+   E     A+S + S  +      
Sbjct: 1376 TLRSFTETDEAEHKLLILVKDNGNVSLSATATVIVKLVEPKEAFAASDVQSAAAEDEDSH 1435

Query: 256  ----VLIILGVVLIVLGFVIILLI 275
                ++I LG V ++    II+LI
Sbjct: 1436 VTFYLIITLGSVSLLFLISIIVLI 1459



 Score = 45.4 bits (106), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 59/262 (22%), Positives = 119/262 (45%), Gaps = 31/262 (11%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGERFSI-------SR 93
            +FS   Y   A E      VL ++     ++  + R+ Y +  D  +   +       S 
Sbjct: 3463 EFSIRPYIFYASEGNEPGAVLFSIKAFDHDESENARITYHIVRDGNDNSKLVSFLNINSD 3522

Query: 94   QGDISLMQCLDYETEDSYRFTVYATDTL---MTTSATVNISVVNVNDWDPRFRYP----Q 146
             G++  ++  D+E+  +++F V ATD+    ++++ TVN+ +++ ND  P   YP     
Sbjct: 3523 SGEVVALKSFDFESVKTFQFYVVATDSGSPPLSSNVTVNVFILDQNDNAPVILYPVSSNG 3582

Query: 147  YELFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYE-KMFSIND-SGHI-SI 201
                +  IP  ++  G ++ KV A D D G    +  SL+   +  +F+++  +G I ++
Sbjct: 3583 SAEGVEEIP-RNVNAGHLVTKVRAYDADIGYNGWLLFSLQQVTDHSLFALDRYTGQIRTL 3641

Query: 202  VDLSALNTSTIQLVVVATDTGNPPRQASVPAIMHFPEAIVQQASSKLNSGTSST------ 255
               +  + +  +L+++  D GN    A+   I+   E     A+S + S  +        
Sbjct: 3642 RSFTETDEAEHKLLILVKDNGNVSLSATATVIVKLVEPKEAFAASDVQSAAAEDEDSHVT 3701

Query: 256  --VLIILGVVLIVLGFVIILLI 275
              ++I LG V ++    II+LI
Sbjct: 3702 FYLIIALGSVSLLFLISIIVLI 3723



 Score = 44.7 bits (104), Expect = 0.069,   Method: Compositional matrix adjust.
 Identities = 54/200 (27%), Positives = 95/200 (47%), Gaps = 38/200 (19%)

Query: 92   SRQGDISLMQCLDYETEDSYRFTVYATDTL---MTTSATVNISVVNVNDWDPRFRYP--- 145
            S  GDIS ++  D+E+  +++F V ATD+    ++++ TVN+ +++ ND  P   YP   
Sbjct: 2044 SETGDISALKSFDFESVKTFQFHVVATDSGSPPLSSNVTVNVFILDQNDNAPVILYPVSS 2103

Query: 146  ----QYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTL-----SLRGPYEKMFSINDS 196
                +    +P   L  +T  S+     A D   G   TL     +    ++ +  + D+
Sbjct: 2104 NGSAEGVEEIPRNSLQQVTDHSLF----ALDRYTGQIRTLRSFTETDEAEHKLLILVKDN 2159

Query: 197  GHISIVDLSALNTSTIQLVVVATDTGNPPRQASVPAIMHFPEAIVQQASSKLNSGTSSTV 256
            G++S   LSA  T  ++LV         P++A       F  + VQ A++++     +  
Sbjct: 2160 GNVS---LSATATVIVKLV--------EPKEA-------FAASDVQSAAAEVEDSHVTFY 2201

Query: 257  LII-LGVVLIVLGFVIILLI 275
            LII LG V ++    II+LI
Sbjct: 2202 LIITLGSVSLLFLISIIVLI 2221



 Score = 40.8 bits (94), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 17/141 (12%)

Query: 103  LDYETEDSYRFTVYATDTL---MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADL 159
            LD E +  Y  T+ A D     +++  TV++ + ++ND  P F    Y  ++        
Sbjct: 1158 LDREKQSIYDLTIIAKDAGQPPLSSEKTVSVVISDINDNCPEFSLNPYIFYVNE----GN 1213

Query: 160  TPGSVIGKVEAADGDKGDRVTLSLR--------GPYEKMFSIN-DSGHI-SIVDLSALNT 209
              G+ +  V+A D D+ D   ++                 +IN DSG I ++      + 
Sbjct: 1214 KQGASVFSVKALDRDQNDNAVIAYHILTDGREDNKLASFLNINSDSGEIVALKSFDFESV 1273

Query: 210  STIQLVVVATDTGNPPRQASV 230
             T Q  VVATD+G+PP  ++V
Sbjct: 1274 KTFQFHVVATDSGSPPLSSNV 1294


>gi|338716849|ref|XP_001917733.2| PREDICTED: LOW QUALITY PROTEIN: cadherin-23 [Equus caballus]
          Length = 3354

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 60/195 (30%), Positives = 90/195 (46%), Gaps = 20/195 (10%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWLSNDYGERFSISR-QGDISLM 100
            F +  Y  +  E++PV  V+LTVT           V+Y L +  G +F+I+   GDI ++
Sbjct: 2402 FDQPSYQEAVFEDVPVGTVILTVTATDADSGNFALVEYSLGDGEG-KFAINPVTGDIYVL 2460

Query: 101  QCLDYETEDSYRFTVYATDT-------LMTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
              LD E +D Y  T  A D            S  V I V+++ND  P+F  PQ+   +  
Sbjct: 2461 SSLDREKKDHYILTALAKDNPGDAASNRRENSVQVVIQVLDINDCRPQFSKPQFSTSV-- 2518

Query: 154  IPLADLTPGSVIGKVEAADGDKGDRVTL--SLRGPYEKMFSIN-DSGHISIVDLSALNTS 210
                +   G+ +  + A D D+G    L  SL GP  + F ++ DSG ++       +  
Sbjct: 2519 --YENEPAGTSVITMMATDQDEGSNGELAYSLEGPGVEAFYVDIDSGLVT-TKRPLQSYE 2575

Query: 211  TIQLVVVATDTGNPP 225
               L VVATD G PP
Sbjct: 2576 RFNLTVVATDGGQPP 2590



 Score = 54.3 bits (129), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 64/210 (30%), Positives = 99/210 (47%), Gaps = 28/210 (13%)

Query: 45  FSKNEYSVSALENLPVNYVLLTV--TTNKPRDL-RVKYWLSNDYGERFSISRQ-GDISLM 100
           FS+  Y++S  EN+ V   +LTV  T N       V Y+ S+D  +RFS+ +  G I L+
Sbjct: 460 FSQPLYNISLYENVTVGTSVLTVLATDNDVGTFGEVNYFFSDD-PDRFSLDKDTGLIMLI 518

Query: 101 QCLDYETEDSYRFTVYATDTL-MTTSATVNISVVNVNDWDPRFRYPQYELFL----PHIP 155
             LDYE    +  TV A D     T+  V I+V++VND  P F+   Y   L    P + 
Sbjct: 519 ARLDYELIQRFTLTVIARDGGGEETTGRVRINVLDVNDNAPTFQKDAYVGALRENEPSV- 577

Query: 156 LADLTPGSVIGKVEAADGDK--GDRVTLSL-----RGPYEKMFSINDSGHISI---VDLS 205
                  + + ++ A D D    +++T S+      G Y  +      G IS+   +D  
Sbjct: 578 -------TQLVRLRATDEDSPPNNQITYSIVSASAFGSYFDISVYEGYGVISVSRPLDYE 630

Query: 206 ALNTSTIQLVVVATDTGNPPRQASVPAIMH 235
            +    I L+V+A D GNPP  ++VP  + 
Sbjct: 631 QIPNGLIYLMVMAKDAGNPPLNSTVPVTIE 660



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 69/218 (31%), Positives = 101/218 (46%), Gaps = 44/218 (20%)

Query: 45  FSKNEYSVSALENLPVNY-VLLTVTTNKPRDLRVKYWLSNDYGE-----------RFSI- 91
           FSK  Y VS +EN+     VL    T+  R        S +YG+           +F I 
Sbjct: 671 FSKPAYFVSVVENIMAGATVLFLNATDLDR--------SREYGQESIIYSLEGSSQFRIN 722

Query: 92  SRQGDISLMQCLDYETEDSYRFTVYATD-----TLMTTSATVNISVVNVNDWDPRFRYPQ 146
           +R G+I+    LD ET+  Y   V A D        T  ATVNI+++++ND  P ++   
Sbjct: 723 ARSGEITTTSLLDRETKSEYILIVRAVDGGVGHNQKTGIATVNITILDINDNHPAWKDAP 782

Query: 147 YELFLPHIPLADLT-PGSVIGKVEAADGDKGDRVTL--SLRGPYEKMFSINDS-GHIS-- 200
           Y     +I L ++T P S +  V A D D G+  TL  S++ P  K +S+N S G I   
Sbjct: 783 Y-----YINLVEMTPPDSDVTTVVAVDPDLGENGTLVYSIQPP-NKFYSLNSSTGKIRTT 836

Query: 201 --IVDLSALNTSTIQL----VVVATDTGNPPRQASVPA 232
             ++D    +    +L    VV  TD G PP +A+  A
Sbjct: 837 HVMLDRENPDPHEAELMRKIVVSVTDCGRPPLRATSSA 874



 Score = 47.4 bits (111), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 57/203 (28%), Positives = 89/203 (43%), Gaps = 23/203 (11%)

Query: 43   LQFSKNEYSVSALENLPVNYVLLTVTTNKPRDL-----RVKYWLSNDYGERFSISR-QGD 96
            +QFS   Y  + LENL +   ++ V      +L     R   + S      F I    G 
Sbjct: 1311 VQFSNASYEAAILENLALGTEIVRVQAYSIDNLNQITYRFDAYTSAQAKALFKIDAITGV 1370

Query: 97   ISLMQCLDYETEDSYRFTVYATDTLMTTSATVN--ISVVNVNDWDPRFRYPQYELFLPHI 154
            I++   +D E  D Y  TV A D      +TV   I+V++ ND  PRF +         +
Sbjct: 1371 ITVKGLVDREKGDFYTLTVVADDGGPKVDSTVKVYITVLDENDNSPRFDFTSDSAV--SV 1428

Query: 155  PLADLTPGSVIGKVEAADGDKGD--RVTLSLR-----GPYEKMFSINDSGHISI---VDL 204
            P  D   G  +  V+A D D G   +V  SL      G +E + + + +G + +   +D 
Sbjct: 1429 P-EDCPVGQRMATVKARDPDAGSNGQVVFSLASGNIAGAFEIITTNDSTGEVFVARPLDR 1487

Query: 205  SALNTSTIQLVVVATDTGNPPRQ 227
              L+   ++  VVA+D G PPR+
Sbjct: 1488 EELDHYILK--VVASDRGTPPRK 1508



 Score = 47.4 bits (111), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 64/235 (27%), Positives = 108/235 (45%), Gaps = 45/235 (19%)

Query: 65   LTVTTNKPRDLRVKYWLS---NDYG---------------ERFSIS-RQGDISLMQCLDY 105
            ++V+ + PR+ RV  WL+   ND G                +FS+  R   +  +  LD 
Sbjct: 1002 VSVSEDVPREFRV-VWLNCTDNDVGLNAELSYFITGGNVDGKFSVGYRDAVVRTVVSLDR 1060

Query: 106  ETEDSYRFTVYATDT-----LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLT 160
            ET  SY   + A D        T +ATV I+V++VND  P F    YE  +P     D+ 
Sbjct: 1061 ETTASYTLFLEAIDNGPVGKRRTGTATVFITVLDVNDNRPIFLQSSYEASVPE----DIP 1116

Query: 161  PGSVIGKVEAADGDKGD--RVTLS-LRGPYEKMFSINDSGHISIVDLSALN---TSTIQL 214
             G  I +++A D D+G+  RV    L+G +   F I+ S  + +    +L+    S+  L
Sbjct: 1117 EGHSIVQLKATDADEGEFGRVWYRILQGNHGNNFRIHVSSGLLMRGPRSLDRERNSSHVL 1176

Query: 215  VVVATDTGNPPRQASVPAIMHFPE------AIVQQASSKLN----SGTSSTVLII 259
            +V A +    P ++SV  I++  +         QQ  S+L     +G  ++V+++
Sbjct: 1177 IVEAYNHDLGPMRSSVRVIVYVEDVNDEAPVFTQQQYSRLGLRETAGIGTSVIVV 1231



 Score = 42.0 bits (97), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 53/199 (26%), Positives = 89/199 (44%), Gaps = 26/199 (13%)

Query: 44  QFSKNEYSVSALENLPVNYVL--LTVTTNKPRDLRV----KYWLSNDYGERF-----SIS 92
           +F+ +EYSV+  E   V + L       +K  +L +    + +L  +    F     S+ 
Sbjct: 347 EFNSSEYSVAITELAQVGFALPLFIQVVDKDENLGLNSMFEVYLVGNNSHHFIISPTSVQ 406

Query: 93  RQGDISLMQC--LDYETEDSYRFTVYATDTL--MTTSATVNISVVNVNDWDPRFRYPQYE 148
            + DI +     LD+ET D Y F ++A +++      A V I+++N ND  P F  P Y 
Sbjct: 407 GKADIRIRVAIPLDFETVDRYDFDLFANESVPDHVGYAKVKITLINENDNRPIFSQPLYN 466

Query: 149 LFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDSGHISIVDLSA 206
           + L      ++T G+ +  V A D D G    V        ++     D+G I ++  + 
Sbjct: 467 ISL----YENVTVGTSVLTVLATDNDVGTFGEVNYFFSDDPDRFSLDKDTGLIMLI--AR 520

Query: 207 LNTSTIQ---LVVVATDTG 222
           L+   IQ   L V+A D G
Sbjct: 521 LDYELIQRFTLTVIARDGG 539



 Score = 39.3 bits (90), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 36/108 (33%), Positives = 50/108 (46%), Gaps = 10/108 (9%)

Query: 92   SRQGDISLMQCLDYETEDSYRFTVYATDTLMTTSAT---VNISVVNVNDWDPRFRYPQYE 148
            S  G +   + +DYE      FTV A+D      A    V + +V++ND +P F  P Y+
Sbjct: 2349 SSAGKVIANRTVDYEEVHWLNFTVRASDNGSPPRAAEIPVYLEIVDINDNNPIFDQPSYQ 2408

Query: 149  LFLPHIPLADLTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSIN 194
                     D+  G+VI  V A D D G+   V  SL G  E  F+IN
Sbjct: 2409 ----EAVFEDVPVGTVILTVTATDADSGNFALVEYSL-GDGEGKFAIN 2451



 Score = 38.5 bits (88), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 65/286 (22%), Positives = 120/286 (41%), Gaps = 61/286 (21%)

Query: 4    EDDFL-QPITLVVRA----IQYDNQDRYALATLIVSK-----AGTSL-----RELQFSKN 48
            +D FL  P+T V+R     I  + Q+ Y L  +   +     +GT++      ++  S+ 
Sbjct: 2113 QDRFLIHPVTGVIRVGNATIDREEQESYRLTVVATDRGTVPLSGTAIITILIDDINDSRP 2172

Query: 49   EY-----SVSALENLPVNYVLLTVTT-NKPRDLRVKYW------------LSNDYGERFS 90
            E+     +VS LE++    V+  VT  ++  D +++Y             L  D  + F+
Sbjct: 2173 EFLNPIQTVSVLESVEPGTVIANVTAIDRDLDPKLEYHIIGIVAKDDTDRLVPDQEDAFA 2232

Query: 91   IS-RQGDISLMQCLDYETEDSYRFTVYATD--------TLMTTSATVNISVVNVNDWDPR 141
            ++   G + +   L+ E   +Y  T+   D        ++   +A + +++++VND  P+
Sbjct: 2233 VNINTGSVMVKSPLNRELVATYEVTLSVIDNASDLPERSVSVPNAKLTVNILDVNDNTPQ 2292

Query: 142  FRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMF-SINDSGHIS 200
            F+      +   I L   T G+ +  V A D DKG      L G    M   +   G++ 
Sbjct: 2293 FKPFGITYYTERI-LEGATLGTTLIAVAAVDPDKG------LNGLITYMLLDLMPPGYVQ 2345

Query: 201  IVDLSA-----------LNTSTIQLVVVATDTGNPPRQASVPAIMH 235
            + D SA                +   V A+D G+PPR A +P  + 
Sbjct: 2346 LEDSSAGKVIANRTVDYEEVHWLNFTVRASDNGSPPRAAEIPVYLE 2391



 Score = 38.1 bits (87), Expect = 7.1,   Method: Compositional matrix adjust.
 Identities = 58/203 (28%), Positives = 87/203 (42%), Gaps = 22/203 (10%)

Query: 31  LIVSKAGTSLRELQFSKNEYSVSAL---ENLPVNYVLLTVTTNKPRDLR---VKYWLSND 84
           +++S +   +  L F  N +  + L   E+ PV     +VT    RD+    + + +S +
Sbjct: 16  VLISGSWGQVNRLPFFTNHFFDTYLLISEDTPVGS---SVTQLLARDMDNDPLVFGVSGE 72

Query: 85  YGERFSISR--QGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRF 142
              RF       G + L Q LD ET+  +      +D     +  VNI V +VND  P F
Sbjct: 73  EASRFFAVEPDTGVVWLRQPLDRETKSEFTVEFSVSDHQGVITRKVNIQVGDVNDNAPTF 132

Query: 143 RYPQYELFLPHIPLADLTP-GSVIGKVEAADGD--KGDRVTLSLRGPYEKMFSINDSGHI 199
               Y + +P     + TP G+ I  V A D D   G  V  S + P    F+I+ +  I
Sbjct: 133 HNQPYSVRIP-----ENTPVGTPIFIVNATDPDLGAGGSVLYSFQPP-SLFFAIDSARGI 186

Query: 200 SIV--DLSALNTSTIQLVVVATD 220
             V  +L    T   QL V ATD
Sbjct: 187 VTVIRELDYETTQAYQLTVNATD 209


>gi|194674457|ref|XP_001789138.1| PREDICTED: protocadherin-23 [Bos taurus]
          Length = 3360

 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 64/209 (30%), Positives = 99/209 (47%), Gaps = 29/209 (13%)

Query: 95   GDISLMQCLDYETEDSYRFTVYATDTL-MTTSATVNISVVNVNDWDPRFRYPQYELFLP- 152
            GDIS  Q LDYE ++ Y   V A D    T S  V + V  +++++P F   QY   LP 
Sbjct: 2820 GDISAQQVLDYENDNKYCLIVQAKDKADSTASVVVWVDVEGIDEFEPIFTQDQYFFSLPE 2879

Query: 153  --HIPLADLTPGSVIGKVEAADGDKG-DRVTL-SLRGPYEKMFSIND-------SGHISI 201
              H+         +IG+VEA+D D G D V L SL  P    FS+N        S  + +
Sbjct: 2880 KSHV-------RHLIGRVEASDADAGVDGVILYSLETP-SPFFSVNKTNGNIYLSRALPL 2931

Query: 202  VDLSALNTSTIQLVVVATDTGNPPRQASVPAIMHFPEAIVQQASSKLNSGTSSTVLIILG 261
            +        TI++ ++A       +  S    ++    +   +  K ++G++S+ LI L 
Sbjct: 2932 IKSQVGKEDTIEMKIIAHSPKLDSKFTSCTVFVN----VSFSSEGKHSAGSASSFLISLT 2987

Query: 262  V---VLIVLGFVIILLILYIHKNKHTKNN 287
            +   V ++L F+ I+LIL  HK K   NN
Sbjct: 2988 ISFLVFLLLVFIPIVLILK-HKQKDAINN 3015



 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 55/160 (34%), Positives = 75/160 (46%), Gaps = 13/160 (8%)

Query: 79   YWL--SNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYA---TDTL-MTTSATVNISV 132
            YWL  S D          G I L + LDYE+   Y F V+A    D L    S +V + V
Sbjct: 1110 YWLEPSTDSAAFGVHPFTGWIYLRRQLDYESTQMYNFRVFAWIPEDKLSQNASTSVTVHV 1169

Query: 133  VNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS-LRGPYEKMF 191
            ++ ND  P F +    L +   P+    P  VIGK+ A D D G    LS      EK F
Sbjct: 1170 LDENDNSPTFWHDVLFLKVQESPM----PQGVIGKITAIDRDSGKNGQLSYFLLSDEKFF 1225

Query: 192  SIN-DSGH-ISIVDLSALNTSTIQLVVVATDTGNPPRQAS 229
             +N ++G  IS V L     +  Q+ V+ +D G+PPR A+
Sbjct: 1226 KMNPNTGELISWVALDHEQRAHHQVAVLVSDHGSPPRSAT 1265



 Score = 51.2 bits (121), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 43/148 (29%), Positives = 75/148 (50%), Gaps = 11/148 (7%)

Query: 86   GERFSISRQ-GDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRY 144
            G +F+I R  G + L++ LD+E    Y   +  +D +  T  TV + V++VND  P F  
Sbjct: 2378 GTKFAIDRNTGVVVLVETLDFEEATKYELQIQISDLVHQTEGTVTVHVLDVNDNPPVFSQ 2437

Query: 145  PQYELFLPHIPLADLTP-GSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDS-GHISIV 202
              Y+     + +++L P G  +  + A D +  + +T  +     KMFS++ + G I  +
Sbjct: 2438 DSYQ-----VTISELVPLGHPVLTIVATDVESSENITYRILS-SSKMFSVDPTNGTIFTI 2491

Query: 203  DLSAL--NTSTIQLVVVATDTGNPPRQA 228
            +   L    STI+ +V A+D G P  +A
Sbjct: 2492 NPVFLMERKSTIRFLVEASDGGFPDLKA 2519



 Score = 45.4 bits (106), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 55/208 (26%), Positives = 95/208 (45%), Gaps = 28/208 (13%)

Query: 38   TSLRELQFSKNEYSVSALENLPVNYVLLTV------TTNKPRDLRVKYWLSNDYGERFSI 91
            T+L   +F + +Y+ S  E++P +  + TV       +++P   R+    S +    FSI
Sbjct: 857  TTLAPAEFERPKYTFSVYEDVPEDSPVGTVKAKESLNSSEPVFYRIS---SGNLDGTFSI 913

Query: 92   SRQ-GDISLMQCLDYETEDSYRFTVYAT--DTLMTTSATVNISVVNVNDWDPRFRYPQYE 148
                G I   + LD+E +     TV A    +   +S  VNI++++VND  P F     E
Sbjct: 914  HPWLGTIRTQKPLDHEAQPVVALTVQAQLGSSPACSSTEVNITIIDVNDNPPVFPKASDE 973

Query: 149  LFLPHIPLADLTPGSVIGKVEAADGDKG----DRVTLSLRGPYEKMFSINDSGHISIV-- 202
            + +       + PG+ + +  A D D G     R +++ + P   +FS+ D+G + +V  
Sbjct: 974  VTVSQ----SMLPGTALYRARAEDKDSGLNGLVRYSIARQSP--SLFSV-DAG-LGVVYL 1025

Query: 203  --DLSALNTSTIQLVVVATDTGNPPRQA 228
               LS        L +VA D G P R +
Sbjct: 1026 NRSLSGAQLQACTLTLVAQDLGVPSRAS 1053



 Score = 45.1 bits (105), Expect = 0.052,   Method: Compositional matrix adjust.
 Identities = 50/182 (27%), Positives = 81/182 (44%), Gaps = 17/182 (9%)

Query: 56   ENLPVNYVLLTVTTNKP---RDLRVKY-WLSNDYGERFSISRQ-GDISLMQCLDYETEDS 110
            E+  V  ++  +T   P   R+ RV +  LS +    F +    G ++    LDYE +  
Sbjct: 1618 EDAAVGSLVHHITAQDPDAGRNGRVTFSILSGNENMAFMLDESSGFLTTASPLDYEIKSQ 1677

Query: 111  YRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGK 167
            +  T+ A D     +++S T+ I+V++VND  P F+   YE  +      +  PG  + +
Sbjct: 1678 HILTLLALDGGTPTLSSSQTLTITVLDVNDEAPVFKQHLYEASVKE----NQNPGEFVTR 1733

Query: 168  VEAADGDKGDRVTLSLR---GPYEKMFSIN-DSGH-ISIVDLSALNTSTIQLVVVATDTG 222
            VEA D D G    L      G    +F IN D+G  ++   L       + L V+  D G
Sbjct: 1734 VEAVDRDSGINSKLQFEIMPGASFMLFQINSDTGEVVTAATLDREVQEVLTLRVLVHDGG 1793

Query: 223  NP 224
             P
Sbjct: 1794 AP 1795



 Score = 44.7 bits (104), Expect = 0.076,   Method: Compositional matrix adjust.
 Identities = 43/140 (30%), Positives = 68/140 (48%), Gaps = 13/140 (9%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDL----RVKYWL-SNDYGERFSISRQ-GDIS 98
            FS  EY V   E+ P    ++ V+ +  RD+     V Y+L S +  + F +  + G +S
Sbjct: 2653 FSSLEYYVHIKESTPPGSPIIVVSASD-RDVGSHAEVSYYLTSGNEKQHFCLEEKTGVLS 2711

Query: 99   LMQCLDYETEDSYRFTVYATDTLMT--TSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
            L++ LDYE    +  TV A+D      + A V ++V++ ND  P+F +P     +P    
Sbjct: 2712 LIKPLDYEETIKFILTVQASDEERKHFSFAIVFVNVLDDNDHAPQFMFPNLNCAVPE--- 2768

Query: 157  ADLTPGSVIGKVEAADGDKG 176
             +L   S I  V A D D G
Sbjct: 2769 -NLPVFSTICSVNALDFDAG 2787



 Score = 40.0 bits (92), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 53/228 (23%), Positives = 95/228 (41%), Gaps = 20/228 (8%)

Query: 10   PITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTT 69
            PI L ++A+      R     L++   G  +R + FS++ Y     EN      ++T+  
Sbjct: 2093 PIWLQLKAVDQGVPARTTTGLLVIHMEGEDVR-ISFSQHLYKGIVPENCEAGTSIVTIKA 2151

Query: 70   NKPRDLR--VKY--WLSNDYGERFSISRQGDISLMQ--CLDYETEDSYRFTVYATDTLMT 123
              P  +R  +KY  +  N+ G     S+ G++++ +   LD+E     +  V A      
Sbjct: 2152 FAPDSIRDSIKYSVFSGNEDGVFSLCSKSGEVTVKEPKFLDFEVRKEVQLIVLAESRGRK 2211

Query: 124  TSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS- 182
              + V + + ++ND  P F    Y++ +      +      I +V A D D G    +  
Sbjct: 2212 AYSKVAVFIQDLNDHPPHFEQSVYQVSVSEGQFYN----HHIVQVFATDLDSGSNGLVEY 2267

Query: 183  --LRGPYEKMFSINDSGHI----SIVDLSALNTSTIQLVVVATDTGNP 224
              L G    +F ++    +    +I+D     TST  L+V A D G P
Sbjct: 2268 SILSGNQGNVFQMDPLSGVLTASAILDYEY--TSTYSLIVQAMDKGMP 2313



 Score = 39.3 bits (90), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 44/158 (27%), Positives = 73/158 (46%), Gaps = 23/158 (14%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTT----NKPRDLRVKYWL-----SNDYG-------E 87
            +F+   Y++S  E+ PV   L+T +T        +  V+Y +      N++         
Sbjct: 2536 EFAIEYYNLSLSEDTPVGRTLVTFSTIDHDWTRENTHVEYSIISGNSQNNFHVETSFIHS 2595

Query: 88   RFSISRQGDISLMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRY 144
             +S  + G + L+  LD E   S+   + A D     +++SATV+I V++V+D  P F  
Sbjct: 2596 EYSYKQVGYLVLLHHLDREATASHELVLLAFDHGCPPLSSSATVSIEVLDVDDNPPAFSS 2655

Query: 145  PQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS 182
             +Y +   HI      PGS I  V A+D D G    +S
Sbjct: 2656 LEYYV---HIK-ESTPPGSPIIVVSASDRDVGSHAEVS 2689



 Score = 38.9 bits (89), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 49/98 (50%), Gaps = 10/98 (10%)

Query: 84  DYGERFSISRQ-GDISLMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWD 139
           + G  FSI  + G IS  + LD E +++    V A D     ++ +  V+I+V +VND +
Sbjct: 589 ECGPSFSIDPESGVISTTRSLDREAQEAIELRVVAHDLGEPPLSATCLVSIAVDDVNDNE 648

Query: 140 PRFRYPQYELFLP-HIPLADLTPGSVIGKVEAADGDKG 176
           P F    Y   LP H P+     G    +V+A+D D G
Sbjct: 649 PVFLKQVYNATLPEHAPV-----GHCFLQVKASDADAG 681



 Score = 38.1 bits (87), Expect = 7.6,   Method: Compositional matrix adjust.
 Identities = 45/151 (29%), Positives = 65/151 (43%), Gaps = 27/151 (17%)

Query: 103 LDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADL 159
           LD E+ D Y   + ATD     ++T  T+ + V ++ND  P F    Y   +        
Sbjct: 489 LDRESRDLYDLRLVATDAGLPPLSTEETLLLRVADLNDQPPLFSQEHYWASVSEA----A 544

Query: 160 TPGSVIGKVEAADGDKGD----RVTLSL------------RGPYE--KMFSIN-DSGHIS 200
            PG+++  V A+D D+      R+  +L            R P E    FSI+ +SG IS
Sbjct: 545 APGTMVLCVSASDADEPGTDHARLRYALLPLPALCNPETPRPPAECGPSFSIDPESGVIS 604

Query: 201 IV-DLSALNTSTIQLVVVATDTGNPPRQASV 230
               L       I+L VVA D G PP  A+ 
Sbjct: 605 TTRSLDREAQEAIELRVVAHDLGEPPLSATC 635


>gi|73949439|ref|XP_849512.1| PREDICTED: protocadherin gamma-B6 [Canis lupus familiaris]
          Length = 819

 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 65/222 (29%), Positives = 102/222 (45%), Gaps = 28/222 (12%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVT-TNKPRDLRVK---YWLSNDYGER--FSI-SRQGDI 97
           FSKNEY++S  ENLP    +L VT T+K   +  +   Y+ S     R  FS+  + G I
Sbjct: 242 FSKNEYTISVSENLPPGSSVLQVTATDKDEGINAEVNYYFRSTAQSTRHMFSLDEKTGTI 301

Query: 98  SLMQCLDYETEDSYRFTVYATD-TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIP- 155
              Q LD+E  + Y   V A D   ++T   V I +++ ND DP       E+ +  +  
Sbjct: 302 KNNQPLDFEDTERYTMEVEARDGGGLSTQCKVIIEILDENDNDP-------EIIITSLSD 354

Query: 156 --LADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSG--HISIVDLSALN--- 208
             L D  PG V+   +  D D G+   ++     +  F I+ S   +  +V   AL+   
Sbjct: 355 EILEDSLPGMVVALFKTQDQDSGENGEVTCNLSRDIPFKIHSSSNNYYKLVTDGALDREH 414

Query: 209 TSTIQLVVVATDTGNPPRQASVPAIMHFPEA-----IVQQAS 245
           +    + + ATD G PP  +S+   +H  +      + QQAS
Sbjct: 415 SPQYNVTITATDRGKPPLSSSISITLHIADVNDNAPVFQQAS 456



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 62/262 (23%), Positives = 110/262 (41%), Gaps = 33/262 (12%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRDL----RVKYWL-SNDYGER-----FSISRQ 94
           F +  Y V   EN P    +  V+ + P DL    RV Y + ++D   R      S+S Q
Sbjct: 452 FQQASYVVHVAENNPPGASIAQVSASDP-DLGPNGRVSYSIVASDLEPRALASYVSVSAQ 510

Query: 95  GDISLMQ-CLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQY--- 147
             +   Q   D+E   ++  T+ A D     ++ + ++ + V + ND  PR  YP     
Sbjct: 511 SGVVFAQRAFDHEQLRAFELTLQARDQGSPALSANVSLRVLVGDRNDNAPRVLYPALGPD 570

Query: 148 -ELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-DSGHISIV 202
                  +P A   PG ++ KV A D D G    LS   L+     +FS+   +G +   
Sbjct: 571 GSALFDTVPRA-AQPGYLVTKVVAVDADSGHNAWLSYHVLQASEPGLFSLGLRTGEVRTA 629

Query: 203 D-LSALNTSTIQLVVVATDTGNPPRQASVPAIMHF--------PEAIVQQASSKLNSGTS 253
             L   + +  +L+V   D G PP  A+   ++ F        P+   +QA +   +   
Sbjct: 630 RALGDRDAARQRLLVAVRDGGQPPLSATATLLLVFADSLQEALPDVSERQAPADPQAELQ 689

Query: 254 STVLIILGVVLIVLGFVIILLI 275
             +++ L ++ ++    +IL +
Sbjct: 690 FYLVVALALISVLFLLAVILAV 711


>gi|348523816|ref|XP_003449419.1| PREDICTED: protocadherin-7-like [Oreochromis niloticus]
          Length = 1255

 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 61/196 (31%), Positives = 88/196 (44%), Gaps = 14/196 (7%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGERFSI-SRQGDISLM 100
           FS+N   VS  EN      + TV     +  R+  + Y L +     FSI +  GDI + 
Sbjct: 502 FSQNVVEVSFPENNAPGERVTTVKAIDADSGRNAEIAYSLDSSVNGIFSIDADSGDIRVN 561

Query: 101 QCLDYETEDSYRFTVYATDTLMTT---SATVNISVVNVNDWDPRFRYPQYELFLPHIPLA 157
             LD E  + Y F V A D  + T   SATV + V + ND +P+F    +  ++      
Sbjct: 562 TILDRELTERYEFKVIAKDKGINTLQGSATVVVLVADKNDNEPKFMQDVFTFYVKE---- 617

Query: 158 DLTPGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSI-NDSGHI-SIVDLSALNTSTIQL 214
           +L P S +G V   D DK     + L     E +FSI N++G I S +        T   
Sbjct: 618 NLDPNSPVGMVTVIDADKDQNAEMGLFIEEEEDIFSIENETGTIFSTLSFDREQKGTYTF 677

Query: 215 VVVATDTGNPPRQASV 230
            V A D G+PP+ A+ 
Sbjct: 678 RVKAVDGGDPPKSATA 693



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 41/158 (25%), Positives = 74/158 (46%), Gaps = 22/158 (13%)

Query: 93  RQGDISLMQCLDYETEDSYRFTVY---ATDTLMTTSATVNISVVNVNDWDPRFRYPQYEL 149
           +Q  + +   LD E  DSY  T+      D   ++ A + + + +VND  PRF    YE 
Sbjct: 223 KQPQLIIKGALDREQRDSYELTLRVRDGGDPPRSSQAILRVMITDVNDNSPRFEKSVYEA 282

Query: 150 FLPHIPLADLTPGSVIGKVEAADGDKG---------DRVTLSLRGPYEKMFSINDS-GHI 199
            LP     + +PG+ I +++AAD D G            T S+R    ++  +++S G +
Sbjct: 283 DLPE----NSSPGAPILQLKAADADVGVNGQIEYVFGAATESVR----RLLRLDESTGWL 334

Query: 200 SIVD-LSALNTSTIQLVVVATDTGNPPRQASVPAIMHF 236
           S++  +     S ++  V+A D G PP+      +++ 
Sbjct: 335 SVLHRIDREEVSQLRFTVMARDRGQPPKMDKATVVLNI 372



 Score = 46.2 bits (108), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 73/319 (22%), Positives = 140/319 (43%), Gaps = 50/319 (15%)

Query: 29  ATLIVSKAGTSLRELQFSKNEYSVSALENL----PVNYVLLTVTTNKPRDLRVKYWLSND 84
           AT++V  A  +  E +F ++ ++    ENL    PV  V + +  +K ++  +  ++  +
Sbjct: 590 ATVVVLVADKNDNEPKFMQDVFTFYVKENLDPNSPVGMVTV-IDADKDQNAEMGLFIEEE 648

Query: 85  YGERFSISRQ-GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDP 140
             + FSI  + G I      D E + +Y F V A D      + +ATV++ V++ ND  P
Sbjct: 649 E-DIFSIENETGTIFSTLSFDREQKGTYTFRVKAVDGGDPPKSATATVSLFVMDENDNAP 707

Query: 141 RFRYP---QYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR----GPYEKMFSI 193
              +P    Y L  P   +      +V+  V A+D D G    L+       P+ ++F I
Sbjct: 708 TVTFPINSSYTLLPPSTNIR-----TVVRTVTASDADTGINAVLNFSIIGGNPF-RLFEI 761

Query: 194 N-DSGHISIV-DLSALNTSTIQLVVVATDTGNPPRQASVPAIMHFPE------AIVQQAS 245
           + + G IS++  L   +    +LVV   D G P +  +    ++  E      A+  Q +
Sbjct: 762 DAERGVISLMAKLEQKHHGLHRLVVQVNDKGQPSQSTTTLVHVYVNETLSNSSAVEAQVA 821

Query: 246 SKLNSGTSSTVL-------------IILGVVLIVLGFVIILLILYIHKNKHTKN-NGPPG 291
             L++  ++ +              I++G+V  ++  ++I+L++ + +    KN NG   
Sbjct: 822 KSLSTSLNTNIAGDPNYDLSKQRLSIVIGIVSGIMTVILIILVVVMARYCRPKNKNGYEA 881

Query: 292 SSHSKNDSFLSNVILPEKH 310
                 D F      P++H
Sbjct: 882 GKKDHEDFF-----TPQQH 895


>gi|347970164|ref|XP_313332.4| AGAP003579-PA [Anopheles gambiae str. PEST]
 gi|333468808|gb|EAA08909.4| AGAP003579-PA [Anopheles gambiae str. PEST]
          Length = 2019

 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 54/182 (29%), Positives = 89/182 (48%), Gaps = 18/182 (9%)

Query: 50   YSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGERFSI-SRQGDISLMQCLDYETE 108
            Y    +E  P+  +L TV          +Y ++      F I +  G +  +  +DYE  
Sbjct: 1028 YHYQVVEEQPIGTILTTVQATDADSTIAEYRMTE--SSFFEIHNTTGLVRSIARIDYEAT 1085

Query: 109  DSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTP-GSV 164
               +F V   DT    +T++A + + VVN ND DP F  P+Y L      + + +P G++
Sbjct: 1086 PVIKFNVSVIDTGVPQLTSTAQITVEVVNTNDNDPEFEQPEYTL-----QVRENSPVGTL 1140

Query: 165  IGKVEAADGDKG--DRVTLSLRGPYEKMFSIN-DSGHISIVDLSALNTSTIQ---LVVVA 218
            +G V A D D G   ++T ++ G +   F I+ D+G I++ + SAL+  T Q   L  +A
Sbjct: 1141 VGMVRARDADAGLYGQLTYTIVGDHSGNFVIDPDTGAITVHNASALDRETEQEASLTAIA 1200

Query: 219  TD 220
            TD
Sbjct: 1201 TD 1202



 Score = 47.4 bits (111), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 37/117 (31%), Positives = 60/117 (51%), Gaps = 10/117 (8%)

Query: 113 FTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFL-PHIPLADLTPGSVIGKVEAA 171
           F V ATD L TT   VNI++ +VN+  P+F    Y   +  + P+     G+V+ +++A 
Sbjct: 764 FGVEATDGLYTTLCNVNITIRDVNNHAPQFARENYLTSIEENFPI-----GTVVDRLQAL 818

Query: 172 DGDKGDRVTLSLR---GPYEKMFSINDSGHISIV-DLSALNTSTIQLVVVATDTGNP 224
           D D G    +  R   G ++     N +G +SI   L     +T Q+ +VA+D+G P
Sbjct: 819 DLDTGINAEIRYRIQQGSFDDFAIDNRTGVVSIARKLDYDRRNTYQMEIVASDSGTP 875



 Score = 44.3 bits (103), Expect = 0.092,   Method: Compositional matrix adjust.
 Identities = 27/106 (25%), Positives = 56/106 (52%), Gaps = 7/106 (6%)

Query: 44  QFSKNEYSVSALENLPVNYV---LLTVTTNKPRDLRVKYWLSNDYGERFSI-SRQGDISL 99
           QF++  Y  S  EN P+  V   L  +  +   +  ++Y +     + F+I +R G +S+
Sbjct: 792 QFARENYLTSIEENFPIGTVVDRLQALDLDTGINAEIRYRIQQGSFDDFAIDNRTGVVSI 851

Query: 100 MQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRF 142
            + LDY+  ++Y+  + A+D+    ++ +  + +S++N ND  P F
Sbjct: 852 ARKLDYDRRNTYQMEIVASDSGTPSLSGTTMLTVSIINSNDKAPYF 897



 Score = 40.8 bits (94), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 53/204 (25%), Positives = 91/204 (44%), Gaps = 35/204 (17%)

Query: 30  TLIVSKAGTSLRELQ-----FSKNEYSVSALEN-LPVNYVLLTVTTNKPR-DLRVKYWLS 82
           T+  ++A  ++R++      F+K EY VS  EN  P   + L ++   P      ++ L 
Sbjct: 323 TVASTQASITIRDVNDSPPMFNKTEYFVSLSENTAPGTPLPLEISVRDPDVGENAEFALR 382

Query: 83  -NDYGERFSI-------SRQGDISLMQ-CLDYETEDSYRFTVY------ATDTLMTTSAT 127
            ND    F +       S Q  I +    LDYE  +  +F V        T+  ++++AT
Sbjct: 383 LNDVSNVFDVEPKLVTGSSQISIRVANGTLDYENPNQRKFIVLLIAEETKTNPKLSSTAT 442

Query: 128 VNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAAD------GDKGDRVTL 181
           + +++ + ND  P F    Y   +         PG +I  + A D      GD+G R +L
Sbjct: 443 LTVAITDANDNRPTFEQDSYSTTVSET----AHPGQLITTITAKDLDSGLYGDQGIRYSL 498

Query: 182 SLRGPYEKMFSIND-SGHISIVDL 204
           S  G   ++FS++  +G IS+ D 
Sbjct: 499 S--GTGSELFSVDAITGAISVADC 520



 Score = 40.0 bits (92), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 47/165 (28%), Positives = 72/165 (43%), Gaps = 25/165 (15%)

Query: 29   ATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDL------RVKYWLS 82
            A + V    T+  + +F + EY++   EN PV  ++  V   + RD       ++ Y + 
Sbjct: 1106 AQITVEVVNTNDNDPEFEQPEYTLQVRENSPVGTLVGMV---RARDADAGLYGQLTYTIV 1162

Query: 83   NDYGERFSIS-RQGDISL--MQCLDYETEDSYRFTVYATDTL-----MTTSATVNISVVN 134
             D+   F I    G I++     LD ETE     T  ATD        +T+  V I V++
Sbjct: 1163 GDHSGNFVIDPDTGAITVHNASALDRETEQEASLTAIATDRAPEGMRRSTTVPVQIRVLD 1222

Query: 135  VNDWDPRFRYPQYELFLPHIPLAD---LTPGSVIGKVEAADGDKG 176
             ND  P F    Y     H  +A+   L P + I +V A D D+G
Sbjct: 1223 ENDNGPTFTQQIY-----HATVAENAALHPPAAILQVMATDPDEG 1262


>gi|297676229|ref|XP_002816045.1| PREDICTED: protocadherin beta-11 [Pongo abelii]
          Length = 797

 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 58/215 (26%), Positives = 98/215 (45%), Gaps = 23/215 (10%)

Query: 95  GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFL 151
           G +  ++ LDYE   ++ F V A+D     +++ A V + V++ ND  P   YP      
Sbjct: 511 GHLFALRSLDYEALQAFEFRVGASDRGSPALSSEALVRVLVLDANDNSPFVLYPLQNGSA 570

Query: 152 PHIPLADLT--PGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSI-NDSGHISIVD-L 204
           P   L      PG ++ KV A DGD G    LS   L+     +FS+   +G + I   L
Sbjct: 571 PCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKATEPGLFSVWAHNGEVRIARLL 630

Query: 205 SALNTSTIQLVVVATDTGNPPRQASV-----------PAIMHFPEAIVQQASSKLNSGTS 253
           S  + +  +LVV+  D G PPR A+               +  PEA+   A ++ +S T 
Sbjct: 631 SERDAAKHRLVVLVKDNGEPPRSATATLQVLLVDGFSQPYLPLPEAV--PAHAQADSITI 688

Query: 254 STVLIILGVVLIVLGFVIILLILYIHKNKHTKNNG 288
           S V+ +  V  + L  V++ +++ + +     + G
Sbjct: 689 SLVVALASVSSLFLFSVLLFVVVRLCRRSRAASVG 723



 Score = 47.4 bits (111), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 63/232 (27%), Positives = 107/232 (46%), Gaps = 28/232 (12%)

Query: 11  ITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTN 70
           ++ V+ A+   +  R   A + V    T+    +F +  Y V   EN  +  ++LTV+  
Sbjct: 208 LSFVLTALDGGSPPRSGTALVKVVVVDTNDNSPEFEQAFYEVKFPENSILGSLVLTVSA- 266

Query: 71  KPRDL------RVKYWLSN---DYGERFSISRQ-GDISLMQCLDYETEDSYRFTVYATD- 119
             RDL       + Y LS+   D  + F I+++ G+I+L   LD+ET +SY   + ATD 
Sbjct: 267 --RDLDSGTNGEICYTLSHASEDIRKTFEINQKSGEITLTAPLDFETIESYSIIIQATDG 324

Query: 120 TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHI--PLADLTPGSVIGKVEAADGDKGD 177
             +   +TV I V++VND  P       E+ +  I  P+ + TP +V+      D D GD
Sbjct: 325 GGLFGKSTVRIQVIDVNDNAP-------EITVSSITSPIPENTPETVVMIFSIQDIDSGD 377

Query: 178 RVTLSLRGPYEKMFSINDS--GHISIVDLSALN---TSTIQLVVVATDTGNP 224
              +    P +  F +  S   + ++     L+   T+   + + ATD G P
Sbjct: 378 NGRIVCSIPEDLPFVLKSSVENYYTLETERPLDRESTAEYNITITATDLGIP 429



 Score = 41.6 bits (96), Expect = 0.65,   Method: Compositional matrix adjust.
 Identities = 44/137 (32%), Positives = 61/137 (44%), Gaps = 21/137 (15%)

Query: 103 LDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADL 159
           LD E+   Y  T+ ATD     + T     + V +VND  P F    Y LF+      + 
Sbjct: 409 LDRESTAEYNITITATDLGIPRLKTEYNTTVLVSDVNDNSPTFTQTSYTLFVRE----NN 464

Query: 160 TPGSVIGKVEAADGDKGD--RVTLSLRGPYE------KMFSIN-DSGH---ISIVDLSAL 207
           +P   IG V A D D G   +V  SL  P +       + SIN D+GH   +  +D  AL
Sbjct: 465 SPALHIGSVSATDRDSGTNAQVNYSLLPPQDPHLPLASLVSINADNGHLFALRSLDYEAL 524

Query: 208 NTSTIQLVVVATDTGNP 224
                +  V A+D G+P
Sbjct: 525 Q--AFEFRVGASDRGSP 539


>gi|162312016|gb|ABX84114.1| hedgling [Nematostella vectensis]
          Length = 3480

 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 52/157 (33%), Positives = 81/157 (51%), Gaps = 11/157 (7%)

Query: 81   LSNDYGERFSIS-RQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVN 136
            +S + G  F +  R G +S+   LD ET  SY   V A+D      + +A++++SV++VN
Sbjct: 1437 ISGNQGNSFQLDPRSGILSVRSTLDRETIPSYTLVVKASDAGSPQQSITASIHVSVLDVN 1496

Query: 137  DWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDR--VTLSLRGPYEKMFSIN 194
            D  PRF   +  LF   I   D +  S + +V+  D D+G    +TLSL G     F+I+
Sbjct: 1497 DNAPRF---EKSLFSGEI-REDASVHSTVLQVKVEDKDEGSNGAITLSLSGEGSDNFTID 1552

Query: 195  DSGHI-SIVDLSALNTSTIQLVVVATDTGNPPRQASV 230
             +G + S   L    T+  QL V A D G+P + A+ 
Sbjct: 1553 STGFVLSKTPLDYETTAAYQLTVTARDGGSPSKSATA 1589



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 64/228 (28%), Positives = 106/228 (46%), Gaps = 20/228 (8%)

Query: 12   TLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTT-- 69
            TLVVRA +  +Q         +     +     F+   Y+ S  ENLP+   +  VT   
Sbjct: 1674 TLVVRATETGSQGESVYNNATIRVLDVNDNAPVFNPGSYAKSLHENLPIGQTVAKVTATD 1733

Query: 70   -NKPRDLRVKYWLSNDYGERFSIS-RQGDISLMQCLDYETEDSYRFTVYATDT---LMTT 124
             ++  + +V Y LS     +F ++   G ++  + LD E + SY   V A D      + 
Sbjct: 1734 RDEGENAKVTYELSVGDTSKFEVNPATGLVTTKRPLDREDQASYSLRVTAMDHGKPSQSA 1793

Query: 125  SATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLS 182
             A + +++ ++ND  P+F   +Y L +      +   GS I +V A+D D G   RVT S
Sbjct: 1794 VAAITLTINDLNDNSPQFSQSKYTLTVTE----NTANGSNILRVLASDPDAGANGRVTYS 1849

Query: 183  -LRGPYEKMFSIND-SGHIS---IVDLSALNTSTIQLVVVATDTGNPP 225
             + G +   F I+  +G I+   +VD  AL  ++  L + A D+G PP
Sbjct: 1850 IISGNHGNAFRIDSTTGRITVVGVVDREAL--ASYNLTISAKDSGVPP 1895



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 53/191 (27%), Positives = 93/191 (48%), Gaps = 11/191 (5%)

Query: 47  KNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLS-NDYGER-FSISRQGDISLMQCLD 104
           + + S + LE+ P+N  ++T+    P    + Y +   D  E+ F+I   G ++L + LD
Sbjct: 676 RGDCSATVLESAPLNTRIVTLAATDPDGDSLLYSVRIRDSQEKIFTIDNSGRLTLNKMLD 735

Query: 105 YETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSV 164
            E + +Y   V A+D  +   A + I+V +VND  P F    Y+  +      D+  GS+
Sbjct: 736 REAKSAYDLVVEASDGNIIAIAALKITVDDVNDNAPFFALSVYKTGV----YEDVAVGSI 791

Query: 165 IGKVEAADGDKG--DRVTLSLRGPYEKMFSINDSGHISIVDLSALNT-STIQLVVVATDT 221
           + ++ A D D G   R++ SL       F+++  G I         T ++ Q+ + A D 
Sbjct: 792 VRQLTAVDLDVGINARLSYSLVSGDTSYFTVDSQGVIRTKGAFDRETKASYQVALRAQDG 851

Query: 222 GNPPR--QASV 230
           G+P R  QA+V
Sbjct: 852 GSPSRSGQATV 862



 Score = 54.3 bits (129), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 62/208 (29%), Positives = 101/208 (48%), Gaps = 26/208 (12%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYW-LSNDYGERFSISR-QGDIS 98
            QF+K+ Y+ +  ENL     +  VT    +   + ++ Y  LS +    F++ R  G+I+
Sbjct: 1292 QFAKSLYTCTVGENLAAGVAVCYVTATDADSGANGKISYSILSGNENMAFAMDRFTGEIT 1351

Query: 99   LMQCLDYETEDSYRFTVYATDTLMT---TSATVNISVVNVNDWDPRFRYPQYELFLPHIP 155
                LD ET  SY  T+ A D  +     + TVNIS+ + ND  P F  P          
Sbjct: 1352 TRVPLDRETIASYSLTINADDGSLVRFMAATTVNISIADENDNQPTFTGPS------RFN 1405

Query: 156  LADLTP-GSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-DSGHISIVDLSALNTS 210
            +++ +P G+ +G++ A D D G    ++   + G     F ++  SG +S+   S L+  
Sbjct: 1406 ISEDSPTGTRVGQLTATDRDIGPNGAVTYAIISGNQGNSFQLDPRSGILSV--RSTLDRE 1463

Query: 211  TI---QLVVVATDTGNPPRQASVPAIMH 235
            TI    LVV A+D G+P  Q S+ A +H
Sbjct: 1464 TIPSYTLVVKASDAGSP--QQSITASIH 1489



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 64/221 (28%), Positives = 103/221 (46%), Gaps = 14/221 (6%)

Query: 12   TLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTT-- 69
            TLVV+A    +  +   A++ VS    +    +F K+ +S    E+  V+  +L V    
Sbjct: 1469 TLVVKASDAGSPQQSITASIHVSVLDVNDNAPRFEKSLFSGEIREDASVHSTVLQVKVED 1528

Query: 70   -NKPRDLRVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTS 125
             ++  +  +   LS +  + F+I   G +     LDYET  +Y+ TV A D      + +
Sbjct: 1529 KDEGSNGAITLSLSGEGSDNFTIDSTGFVLSKTPLDYETTAAYQLTVTARDGGSPSKSAT 1588

Query: 126  ATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSL-R 184
            A V I+++NVND  P F  P     +P     D+   + + K+ A D D G  +T  +  
Sbjct: 1589 AQVKITIINVNDNVPSFVSPAQVTSIPE----DVAINTHVVKLNATDSD-GTPLTFDIVE 1643

Query: 185  GPYEKMFSIND-SGHISIVD-LSALNTSTIQLVVVATDTGN 223
            G     F I+  SG IS+   L    T+   LVV AT+TG+
Sbjct: 1644 GNAGSSFKIDQSSGLISVAKRLDRETTANYTLVVRATETGS 1684



 Score = 51.6 bits (122), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 62/192 (32%), Positives = 84/192 (43%), Gaps = 18/192 (9%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKP-----RDLRVKYWLSNDYGERFSI-SRQGDIS 98
            F+   Y  S  EN   +  +LTV  +         LR      ND  +RF I S  G I 
Sbjct: 2020 FNSQSYIGSVRENSAQSTSVLTVAADDSDVGANAVLRYSIISGNDE-KRFKINSTSGVIM 2078

Query: 99   LMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLAD 158
                LD+E +  Y   V ATD+  T    V I V+N+ND  P F    Y      +    
Sbjct: 2079 TTTPLDFEEKSQYGLEVTATDSKYTAKTNVTIRVINLNDITPAFTQQNY---TASVRENS 2135

Query: 159  LTPGSVIGKVEAADGDKGDRVTLSLRGPYEK-MFSIND-SGHISIVDLSALNTSTIQLVV 216
             T  SV+ KV A+D D    ++ S+ G  +   FSI+  SG IS  D+  L+   + L  
Sbjct: 2136 PTSTSVV-KVSASDRDSFGSLSYSIVGGKDSDKFSIDQRSGIISTADV--LDRELVSLYA 2192

Query: 217  V---ATDTGNPP 225
            +    TD GNPP
Sbjct: 2193 IQVRVTDAGNPP 2204



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 57/193 (29%), Positives = 93/193 (48%), Gaps = 23/193 (11%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTTNKPR--DLRVKYWLSNDYGERFSISRQGDISLMQ 101
           +F  N Y  +  EN P   V +   T++    +  + Y L +   +    S+ G+I  + 
Sbjct: 570 EFPLNSYVFNIRENTPAAQVAIVTATDRDSGTNAAITYSLFSGENKFMMNSKTGEIRTVT 629

Query: 102 CLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRF------RYPQYELFLPHIP 155
            LD+ET+DSY   + A D   TT   + I++++VN+  PRF      R       L   P
Sbjct: 630 PLDHETKDSYTMRISAFDGKHTTFVPLVINILDVNE-PPRFQDDCTRRGDCSATVLESAP 688

Query: 156 LADLTPGSVIGKVEAADGDKGDRV--TLSLRGPYEKMFSINDSGHISI---VDLSALNTS 210
           L      + I  + A D D GD +  ++ +R   EK+F+I++SG +++   +D  A   S
Sbjct: 689 L-----NTRIVTLAATDPD-GDSLLYSVRIRDSQEKIFTIDNSGRLTLNKMLDREA--KS 740

Query: 211 TIQLVVVATDTGN 223
              LVV A+D GN
Sbjct: 741 AYDLVVEASD-GN 752



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 57/208 (27%), Positives = 89/208 (42%), Gaps = 23/208 (11%)

Query: 39  SLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGERFSI-SRQGDI 97
           S+ +  F+K+ YS S  E L     ++TV+++   +LR      ND G  F+I S  G I
Sbjct: 464 SMWDTLFAKDSYSASVKEELQATQNVITVSSSVSPNLRYSIMDGNDQG-MFTIDSSTGSI 522

Query: 98  SLM-QCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
           +   +  D E+E  YR TV A D          + V++V D +     P++ L      +
Sbjct: 523 TTTGRKFDRESESRYRLTVLAQDAANRCHKGRTVVVIDVKDEND--NAPEFPLNSYVFNI 580

Query: 157 ADLTPGSVIGKVEAADGDKGDR--VTLSLRGPYEKMFSINDSGHISIV------------ 202
            + TP + +  V A D D G    +T SL     K    + +G I  V            
Sbjct: 581 RENTPAAQVAIVTATDRDSGTNAAITYSLFSGENKFMMNSKTGEIRTVTPLDHETKDSYT 640

Query: 203 -DLSALN---TSTIQLVVVATDTGNPPR 226
             +SA +   T+ + LV+   D   PPR
Sbjct: 641 MRISAFDGKHTTFVPLVINILDVNEPPR 668



 Score = 43.5 bits (101), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 62/199 (31%), Positives = 94/199 (47%), Gaps = 24/199 (12%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTT----NKPRDLRVKYWL-SNDYGERFSI-SRQGDIS 98
            FS + YS    E+  +   ++TVT     + PR  R++Y L S +    F+I +  G I 
Sbjct: 1086 FSPSNYSKQIPESTVIGSTVVTVTATDLDSGPRG-RLEYRLISGNVKGAFNIDANSGSIR 1144

Query: 99   LMQCLDYETEDSYRFTVYATDTLMTTSAT---VNISVVNVNDWDPRFRYPQYELFLPHIP 155
            +   LD ET  SY   V A D   T+ ++   V I++ ++ND  P F+ P    ++  + 
Sbjct: 1145 VSSELDRETTPSYSLQVEARDGGSTSRSSSTRVTIALQDINDNSPIFQGP----YVFRVS 1200

Query: 156  LADLTPGSVIGKVEAADGD---KGD-RVTLSLRGPYEKMFSINDS-GHISI-VDLSALNT 209
             +  +PG  IG+V A D D    GD R  LS       +FSIN S G I++   L     
Sbjct: 1201 ESS-SPGHQIGQVAATDADDSSNGDVRYALS---DNTDVFSINTSTGLITLKTQLDYEKK 1256

Query: 210  STIQLVVVATDTGNPPRQA 228
            +   + V A D G P R +
Sbjct: 1257 TQYMVTVTAKDGGTPSRSS 1275



 Score = 40.0 bits (92), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 51/189 (26%), Positives = 78/189 (41%), Gaps = 14/189 (7%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDL--RVKYWL-SNDYGERFSI-SRQGDISLM 100
            F++  Y+ S  EN P +  ++ V+ +  RD    + Y +      ++FSI  R G IS  
Sbjct: 2122 FTQQNYTASVRENSPTSTSVVKVSASD-RDSFGSLSYSIVGGKDSDKFSIDQRSGIISTA 2180

Query: 101  QCLDYETEDSYRFTVYATDTL---MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLA 157
              LD E    Y   V  TD     ++    V I +++ ND  P+F    Y   +    L 
Sbjct: 2181 DVLDRELVSLYAIQVRVTDAGNPPLSNLTWVTIKILDENDNSPKFDSSSYSSSI----LE 2236

Query: 158  DLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSGHI--SIVDLSALNTSTIQLV 215
            +  P S   K+ A D D+G    ++        F I  S  +  ++  L     S   L 
Sbjct: 2237 NSAPSSFSFKLAATDADEGTNARITYNLSRNDAFMIGASSGVITNVRKLDREQVSIYTLY 2296

Query: 216  VVATDTGNP 224
            V A D GNP
Sbjct: 2297 VQAVDQGNP 2305



 Score = 38.5 bits (88), Expect = 6.2,   Method: Compositional matrix adjust.
 Identities = 51/194 (26%), Positives = 89/194 (45%), Gaps = 19/194 (9%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKP-----RDLRVKYWLSNDYGERFSISR-QGDIS 98
            FS  +Y+ S  E++ +   ++TVT +        DLR  +  S +    F++    G ++
Sbjct: 876  FSSAQYTASVDEDVAIGAAMVTVTASDKDNGNNADLRYSF-TSGNTNHAFTLDAVTGVVT 934

Query: 99   LMQCLDYETEDSYRFTVYATDTL---MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIP 155
            + + LD+E   SY   +  TD     +T ++ + I+V ++ND  P F    Y+  +    
Sbjct: 935  VSRSLDFEQRSSYALGLSVTDRGSPPLTDTSHLLINVNDINDNPPVFSPSAYQSRVKE-- 992

Query: 156  LADLTPGSVIGKVEAADGDK---GDRVTLSLRGPYEKMFSINDS-GHISIVDLSAL-NTS 210
              +   G+ + +V A D D    G  V   ++G  + +F+I+ S G ISI       N +
Sbjct: 993  --NTPAGTQVIQVSATDRDSSTNGALVFGIIKGNDDGVFTIDGSTGIISIAKSPDYENKT 1050

Query: 211  TIQLVVVATDTGNP 224
               L V A D G P
Sbjct: 1051 RYDLTVQARDRGVP 1064


>gi|148703183|gb|EDL35130.1| mCG142341 [Mus musculus]
          Length = 2317

 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 61/192 (31%), Positives = 91/192 (47%), Gaps = 24/192 (12%)

Query: 50  YSVSALENLPVNYVLLTVTTNKPRDLRV----KYWLSNDYGERFSIS-RQGDISLMQCLD 104
           +S    EN P+ Y +  VTT+   D+ +    +Y +  D    F+I+   GDI + + L+
Sbjct: 682 FSAYVSENSPLGYTVTRVTTSD-EDIGINAISRYSIV-DTSLPFTINPNTGDIVISRPLN 739

Query: 105 YETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSV 164
            E  D YR  V A D+  T S  V I V ++ND  PRF  P Y L  P +P      GS 
Sbjct: 740 REDTDRYRIRVSAHDSGWTVSTDVTIFVTDINDNTPRFSRPSYYLDCPELPEL----GSR 795

Query: 165 IGKVEAADGDKGD--RVTLSLRGPYEKMFSIN-DSGHI---------SIVDLSALNTSTI 212
           + +V A D D+G   +V   ++   E  F IN  +G I         ++   S +N +  
Sbjct: 796 VTQVSATDPDEGSNGQVFYFIKSQSE-YFRINATTGEIFNKQVLKYQNVSGFSNVNINRH 854

Query: 213 QLVVVATDTGNP 224
             +V A+D GNP
Sbjct: 855 SFIVTASDRGNP 866



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 55/187 (29%), Positives = 88/187 (47%), Gaps = 16/187 (8%)

Query: 56  ENLPVNYVLLTVTTNKPR---DLRVKYWLSNDYGERFSISR-QGDISLMQCLDYETEDSY 111
           EN P++ V+       P    +  ++Y L N  G +FSI    G++ L   LD E   +Y
Sbjct: 12  ENTPIDTVVFKAQATDPDSGPNSYIEYTLLNPSGNKFSIGTIDGEVHLTGELDREEVSNY 71

Query: 112 RFTVYATDTL---MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKV 168
             TV ATD     +++S  V + V+++ND +P F    Y + +      ++  G+ I +V
Sbjct: 72  SLTVVATDKGQPPLSSSTEVVVMVLDINDNNPVFAQAMYRVQIKE----NILTGTDIIQV 127

Query: 169 EAADGDKGDRVTLS---LRGPYEKMFSIND-SGHISIV-DLSALNTSTIQLVVVATDTGN 223
            AAD D+G    +    + G   + F I+  +G I++   L    T    L V ATD G+
Sbjct: 128 SAADNDEGTNGQVRYGIVGGNTHQEFRIDSVTGAITVAKSLDRETTPAYTLTVQATDRGS 187

Query: 224 PPRQASV 230
            PR  S 
Sbjct: 188 SPRTDSC 194



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 57/189 (30%), Positives = 94/189 (49%), Gaps = 15/189 (7%)

Query: 56  ENLPVNYVLLTVTTNKPRDLRVKYWL-SNDYGERFSISR-QGDISLMQCLDYETEDSYRF 113
           EN PV  ++ T+T +  R   + Y++ S + G+ F I    G +S+ Q LD+E    Y  
Sbjct: 483 ENQPVGTLVTTITGSSLRGETLSYYIASGNLGDTFQIDPLTGQVSISQPLDFEKIQKYVV 542

Query: 114 TVYATDTL---MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEA 170
            + A D      ++   ++I+V+++ND  P F   + + F+  I L +L+P  ++  V A
Sbjct: 543 WIEARDGGFPPFSSYEKLDITVLDINDNAPTF---EEDPFVSEI-LENLSPRKIL-TVSA 597

Query: 171 ADGDKGDRVTLS---LRGPYEKMFSINDS-GHI-SIVDLSALNTSTIQLVVVATDTGNPP 225
            D D G    L    + G  E  F+IN + G I SI  L     S  +L V ++D G+P 
Sbjct: 598 TDKDSGPNGQLDYEIVNGNQESSFTINHATGEIRSIRPLDREKISHYELTVKSSDKGSPS 657

Query: 226 RQASVPAIM 234
           +  SV  I+
Sbjct: 658 QSTSVKVII 666



 Score = 43.9 bits (102), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 39/148 (26%), Positives = 69/148 (46%), Gaps = 14/148 (9%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLS------NDYGERFSISRQGDI 97
            +FS+N  S +  E+  +  V+ TV+  + RD  +   +S      N+ G     S  G +
Sbjct: 993  EFSQNHISATIPESHSIGSVVRTVSA-RDRDTAMNGLISYNITSGNEEGIFAINSSTGVV 1051

Query: 98   SLMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHI 154
            +L + LDYE    +  T+ ATD      T   ++ +SV++VND  P F   +   F P +
Sbjct: 1052 TLAKALDYEMSSKHEMTISATDGGWVARTGYCSLTVSVIDVNDNSPVFVPDE---FFPTV 1108

Query: 155  PLADLTPGSVIGKVEAADGDKGDRVTLS 182
             + +   G+ +  + A D D G    ++
Sbjct: 1109 -MENAPSGTTVIHLNATDADSGANAVIA 1135



 Score = 42.4 bits (98), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 46/149 (30%), Positives = 70/149 (46%), Gaps = 12/149 (8%)

Query: 95  GDISLMQCLDYETEDSYRFTVYATDT----LMTTSATVNISVVNVNDWDPRFRYPQYELF 150
           G I     LD ET+D+Y   V A+D      +++S +V +++ +VND  PRF   Q+  +
Sbjct: 320 GQIITSALLDRETKDNYTLVVVASDAGSPESLSSSTSVLVTITDVNDNPPRF---QHHPY 376

Query: 151 LPHIPLADLTPGSVIGKVEAADGDKGDRVTL--SLRGPYEKMFSINDSGHISIVDLSALN 208
           + HIP +   PGS +  V   D D G    L  SL G   + F I D    +I+    L+
Sbjct: 377 VTHIP-SPTPPGSFVFAVTVTDADIGSNSELHYSLSGRNSEKFHI-DPLRGAIMAAGPLS 434

Query: 209 -TSTIQLVVVATDTGNPPRQASVPAIMHF 236
             S +   V   D G+ P+  S    + F
Sbjct: 435 GASEVTFSVHVKDGGSFPKTDSTTVTVRF 463



 Score = 42.0 bits (97), Expect = 0.57,   Method: Compositional matrix adjust.
 Identities = 53/211 (25%), Positives = 89/211 (42%), Gaps = 16/211 (7%)

Query: 25   RYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWL 81
            R    +L VS    +     F  +E+  + +EN P    ++ +     +   +  + Y +
Sbjct: 1079 RTGYCSLTVSVIDVNDNSPVFVPDEFFPTVMENAPSGTTVIHLNATDADSGANAVIAYTV 1138

Query: 82   SNDYGERFSIS-RQGDISLMQCLDYETEDSYRFTVYA---TDTLMTTSATVNISVVNVND 137
             +   + F I    G I+    LD+ET+ SY  TV A    D    + ATV+I +   N+
Sbjct: 1139 QSSDSDLFVIDPNMGVITTQGFLDFETKQSYHLTVKAFNVPDEEKCSFATVDIQLKGTNE 1198

Query: 138  WDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAAD---GDKGDRVTLSLRGPYEKMFSIN 194
            + PRF    Y   +        + G+ +G+V A+D   G  G+   L      +K F IN
Sbjct: 1199 YVPRFVSKLYYFEVSEA----ASRGTAVGEVFASDRDMGADGEVHYLIFGNSRKKGFQIN 1254

Query: 195  D-SGHISIVD-LSALNTSTIQLVVVATDTGN 223
              +G I +   L       + L V+A + GN
Sbjct: 1255 KMTGQIYVSGLLDREKEERVSLKVLAKNFGN 1285



 Score = 41.2 bits (95), Expect = 0.88,   Method: Compositional matrix adjust.
 Identities = 38/135 (28%), Positives = 64/135 (47%), Gaps = 8/135 (5%)

Query: 89   FSISRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYP 145
            FS+S  G +S  + +D E    +  +V   D+    M+++ TV+I+V++ ND   + R  
Sbjct: 1463 FSLSTAGVLSTTREIDREQIADFYLSVVTRDSGAPQMSSTGTVHITVLDQNDNPSQSR-- 1520

Query: 146  QYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSGHISIVDLS 205
              E+F+ +    +L PG  +G V+  D D  D    SL      +FSI  +G   +    
Sbjct: 1521 TVEIFVNY--YGNLFPGGTLGSVKPQDPDVLDSFHCSLTSGVTSLFSI-PAGSCDLSSQP 1577

Query: 206  ALNTSTIQLVVVATD 220
                 T  L VV++D
Sbjct: 1578 RSTDGTFDLTVVSSD 1592


>gi|345307957|ref|XP_001508966.2| PREDICTED: protocadherin Fat 2 [Ornithorhynchus anatinus]
          Length = 4144

 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 50/180 (27%), Positives = 85/180 (47%), Gaps = 16/180 (8%)

Query: 37   GTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGER---FSISR 93
            G S   L F +  ++ + +E  PVN+++  ++T     L    W +   G+    F I +
Sbjct: 1336 GPSSEVLAFDEPHFNFAVMETDPVNHMVGVISTEVQSGL---LWFNISGGDEDMDFDIEK 1392

Query: 94   Q-GDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLP 152
              G +++ + LD     SY  TV  TD     S    I V+++N + P+F   QYE+ +P
Sbjct: 1393 TTGSMAIARRLDARKRSSYNLTVQVTDGSSVISTQTYIHVISINQYRPQFLEDQYEVKVP 1452

Query: 153  HIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYE----KMFSINDSGHISIVDLSALN 208
                 D  PG  I +V A D DKG  +  +L G  +    ++F + D G  ++V +  L+
Sbjct: 1453 Q----DTPPGVEIIRVSATDKDKGKGLIYTLHGSADPRSTRLFQL-DPGSGTLVTVGKLD 1507



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 62/191 (32%), Positives = 93/191 (48%), Gaps = 19/191 (9%)

Query: 45   FSKNEYSVSALENLPVN---YVLLTVTTNKPRDLRVKYWL---SNDYGERFSI-SRQGDI 97
            FS+  Y+ S  E LP +     LL    +  R+  V Y +    +D  E F +  R G +
Sbjct: 2267 FSQTVYTASVSEGLPAHTPVIRLLAADRDSGRNGAVSYQIVEDGSDASEFFQVDGRTGQM 2326

Query: 98   SLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHI 154
            +  + LDYE    +R  V A D     +++ A V + VV+VND  P FR PQYE  +  +
Sbjct: 2327 ATARELDYELRRQFRVKVSAADDGEPALSSEALVVVQVVDVNDNPPEFRQPQYEANVSEL 2386

Query: 155  PLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-DSGHISIVDLSALNTS 210
                 T G ++ KV+A D D G+   L    L G  ++ F+IN  SG IS+ +L   +  
Sbjct: 2387 ----ATCGHLVLKVQALDPDSGETTRLEYLILSGNEDRHFTINSSSGIISMFNLCRRHLD 2442

Query: 211  -TIQLVVVATD 220
               +L V A+D
Sbjct: 2443 PAYRLRVAASD 2453



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 68/229 (29%), Positives = 108/229 (47%), Gaps = 30/229 (13%)

Query: 15   VRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLP--VNYVLLTVTTNKP 72
            +RA       R +L  L +  A + +   +FS+  Y+ SA E+LP      L+     +P
Sbjct: 2657 IRARDGGTPQRDSLVPLRLQVAPSGVSLPKFSEPLYTFSASEDLPEGSEIGLVKAVAEEP 2716

Query: 73   RDLRVKYWL-------SNDYGERFSISRQ-GDISLMQCLDYETEDSYRFTVYA----TDT 120
                V Y L       SN  G  FS+ R  G + + + +D+ET   Y+  V A     +T
Sbjct: 2717 ----VIYSLVKGTTPESNQDGA-FSLDRDTGALKVNKSVDHETTRWYQLDVMAHCSHQET 2771

Query: 121  LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGD--R 178
             + +  +VNI V +VND  P F    Y+ FL    + ++  G+ + +V A D D G   +
Sbjct: 2772 ELVSLVSVNIQVKDVNDNQPVFEADPYKAFL----MENMPVGTTVIQVTANDQDTGSDGQ 2827

Query: 179  VTLSLRGPYE---KMFSIN-DSGHISI-VDLSALNTSTIQLVVVATDTG 222
            VT SL    +   ++F+I+ +SG I+   +L      T Q  VVA+D G
Sbjct: 2828 VTYSLAAESDWVGELFAIDRESGWITTRKELDCEARETYQFHVVASDHG 2876



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 38/121 (31%), Positives = 61/121 (50%), Gaps = 8/121 (6%)

Query: 30   TLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWL-SNDY 85
            T++++    +  E +F++  YS    E+  V   +LT+T    + P +  V Y L   D 
Sbjct: 3301 TVVINVTDVNDHEPKFTQELYSTDIREDAAVGETILTLTAVDEDGPMNSNVTYSLVGGDP 3360

Query: 86   GERFSIS-RQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPR 141
               F+I  ++G+I + + LD+E   SY  TV ATD     +     V+I V +VND  PR
Sbjct: 3361 QGHFAIHPKRGEIHVARPLDWEETPSYHLTVRATDNGQPALWRDGAVSIHVADVNDNPPR 3420

Query: 142  F 142
            F
Sbjct: 3421 F 3421



 Score = 47.8 bits (112), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 42/141 (29%), Positives = 63/141 (44%), Gaps = 18/141 (12%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGERFSIS--RQGDISLMQC 102
            F    Y V   EN+P+   +L      P  LR+ Y +  +      ++  + G +S++  
Sbjct: 2166 FQSLRYRVKVPENIPLFTPILHTQARSPEGLRLIYNIMEEESLALFMADFKTGVLSVIGP 2225

Query: 103  LDYETEDSYRFTVYATDTLMT--TSATVNISVVNVNDWDPRFRYPQY-----ELFLPHIP 155
            LDYE +  + FTV ATDT +   + ATV++ V ++ND  P F    Y     E    H P
Sbjct: 2226 LDYEAKAEHVFTVRATDTALGSFSEATVHVEVEDINDNPPVFSQTVYTASVSEGLPAHTP 2285

Query: 156  LADLTPGSVIGKVEAADGDKG 176
            +  L          AAD D G
Sbjct: 2286 VIRLL---------AADRDSG 2297



 Score = 47.0 bits (110), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 48/184 (26%), Positives = 84/184 (45%), Gaps = 13/184 (7%)

Query: 50   YSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGERFSIS-RQGDISLMQCLDY 105
            Y+    E++P  + +L V+    +   + +V Y L     + F +    G++  +  LD 
Sbjct: 3011 YTGRVAEDVPPGHFILQVSAVDADAGVNAQVTYSLHGPGADEFRLDPYTGELFTLTALDR 3070

Query: 106  ETEDSYRFTVYATD-TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSV 164
            E +D Y     ATD    +  A V + V +VND  PRF      + +      + T  + 
Sbjct: 3071 EEKDRYHLVAKATDGGGRSCQADVILGVDDVNDNAPRFTISHCSVVV----FDNTTVKTP 3126

Query: 165  IGKVEAADGDKG--DRVTLSLRGPYEKMFSINDSGHISIVD--LSALNTSTIQLVVVATD 220
            +  V A D D+G   +VT SL    +  FS+  +  +  ++  L  ++ S ++LVV A D
Sbjct: 3127 VAVVSARDPDEGPNAQVTYSLTNSADGRFSVEATTGVIRLEKALKDMDHSVLELVVQAAD 3186

Query: 221  TGNP 224
             G+P
Sbjct: 3187 QGDP 3190



 Score = 42.0 bits (97), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 50/188 (26%), Positives = 85/188 (45%), Gaps = 20/188 (10%)

Query: 18  IQYDNQDRY-ALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVL--LTVTTNKP-- 72
           +Q  N + Y +L+T  +++ G    E  F +   S+  +EN+PVN  +  LT T +    
Sbjct: 686 VQEANSEEYTSLSTYQINRHGPQFEE-SFPR---SIDVMENVPVNSTIAHLTATDHDSGF 741

Query: 73  RDLRVKYWLSNDYGERFSISRQ-GDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNIS 131
             + V      +    F I  + G + ++  LD+E    Y   V   D  +   ++    
Sbjct: 742 NGMLVYSLAEGNEASCFDIDLETGLLRVVAPLDHEASSFYVLNVTVHDLGIPQKSSWKQL 801

Query: 132 VVNVNDWD---PRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGD--RVTLSLRGP 186
            VNV D +   PRF    Y + +P     D  PG+ + ++ A D DK D  +V  +L  P
Sbjct: 802 AVNVGDANDNVPRFPPGGYRVRIPE----DTQPGTTVMRLRADDADKEDNGKVRYALLTP 857

Query: 187 YEKMFSIN 194
            +K FS++
Sbjct: 858 SDK-FSVH 864



 Score = 41.6 bits (96), Expect = 0.61,   Method: Compositional matrix adjust.
 Identities = 46/191 (24%), Positives = 85/191 (44%), Gaps = 15/191 (7%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTTNKP---RDLRVKYW-LSNDYGERFSI-SRQGDIS 98
            +F + +Y  +  E     +++L V    P      R++Y  LS +    F+I S  G IS
Sbjct: 2373 EFRQPQYEANVSELATCGHLVLKVQALDPDSGETTRLEYLILSGNEDRHFTINSSSGIIS 2432

Query: 99   LMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLAD 158
            +        + +YR  V A+D +  ++  V I+  N N + P F    YE  L    +A 
Sbjct: 2433 MFNLCRRHLDPAYRLRVAASDGVFRSTVPVYINTTNANKYSPAFDQHVYEAELAENAMA- 2491

Query: 159  LTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSINDSGHISIV-DLSALNTS--TI 212
               G+ + ++ A D D G   T+    +     + F+++  G I+ + +L   N++   I
Sbjct: 2492 ---GTKVIELLAVDPDDGPYGTVDYIIINKLASEKFAVDAKGRITTLQELDRENSTERVI 2548

Query: 213  QLVVVATDTGN 223
             + ++A D G 
Sbjct: 2549 AIKIMARDGGG 2559



 Score = 41.2 bits (95), Expect = 0.75,   Method: Compositional matrix adjust.
 Identities = 34/123 (27%), Positives = 59/123 (47%), Gaps = 9/123 (7%)

Query: 103 LDYETEDSYRFTVYATD--TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLT 160
           L+ E ++SY   + AT+  + +  S  V I +++ ND  P F  P Y + +P     +  
Sbjct: 110 LNREVKESYTLLIQATEKTSELEASTHVRIQILDRNDLKPLFSPPSYRVTIPD----NTP 165

Query: 161 PGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSIN-DSGHISIV-DLSALNTSTIQLVVV 217
           P   I  V A D D G          P  ++F+++  SG +++   LSA++    +L V+
Sbjct: 166 PKRTICTVSATDADLGQNAGFYYAFNPRSELFAVHPTSGAVTVTGKLSAIHRGRHELRVL 225

Query: 218 ATD 220
           A D
Sbjct: 226 AVD 228



 Score = 41.2 bits (95), Expect = 0.86,   Method: Compositional matrix adjust.
 Identities = 51/201 (25%), Positives = 88/201 (43%), Gaps = 18/201 (8%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDL---RVKYWLSNDYG-ERFSISRQGDISLM 100
            F ++ Y     EN      ++ +    P D     V Y + N    E+F++  +G I+ +
Sbjct: 2476 FDQHVYEAELAENAMAGTKVIELLAVDPDDGPYGTVDYIIINKLASEKFAVDAKGRITTL 2535

Query: 101  QCLDYE--TEDSYRFTVYATDTLMTTS-ATVNISVVNVNDWDPRFRYPQYELFLPHIPLA 157
            Q LD E  TE      + A D     +  TV I + +VND  P+F+  +Y + +     +
Sbjct: 2536 QELDRENSTERVIAIKIMARDGGGKVAFCTVKIILTDVNDNPPQFKASEYTVSV----QS 2591

Query: 158  DLTPGSVIGKVEAADGDKGDRVTL-----SLRGPYEKMFSINDS-GHISIVD-LSALNTS 210
            ++  G+ + +V A D D+G    +     SL    E++  IN + G + + + L  L   
Sbjct: 2592 NVGKGAPVIQVLAYDADEGLNADVTYSVDSLEDLEEEVIEINPATGMVKVRESLIKLENR 2651

Query: 211  TIQLVVVATDTGNPPRQASVP 231
                 + A D G P R + VP
Sbjct: 2652 AFDFNIRARDGGTPQRDSLVP 2672



 Score = 40.4 bits (93), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 53/196 (27%), Positives = 84/196 (42%), Gaps = 18/196 (9%)

Query: 43   LQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGERFSISRQGDISLMQC 102
            L+F ++EY+ +  EN  V   L+ +     +      + + +  E F + R   +   + 
Sbjct: 1961 LRFDRDEYTAAVKENSGVAQALVILGVQGSQLNDTLSFSALNGRELFEMIRSVGVLRTRG 2020

Query: 103  L--DYETEDSYRFTVYATDTL---MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLA 157
            L  D E ++++   V   D         ATV + V + ND  P F    Y   +P     
Sbjct: 2021 LVFDREQQETHEVAVEVRDNRSPPRVARATVRVRVEDANDNRPTFENLPYFTSVPE---- 2076

Query: 158  DLTPGSVIGKVEAADGDKGDR--VTLSLRGPYEKMFSINDS-GHISI---VDLSALNTST 211
               PG V+ +V A D D G    VT      Y+  F I+   G IS+   +D  ALN   
Sbjct: 2077 GTDPGDVVFQVSATDRDLGANGTVTYGFAEDYQ-YFRIDPYLGDISLRKPLDYRALNKYL 2135

Query: 212  IQLVVVATDTGNPPRQ 227
            ++  V+A D G+PP Q
Sbjct: 2136 LK--VIARDGGDPPLQ 2149



 Score = 39.7 bits (91), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 61/138 (44%), Gaps = 11/138 (7%)

Query: 95  GDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHI 154
           G I+  + LD+     Y+  +  +     TS TV + +V+ N+  P F    Y       
Sbjct: 410 GLITTTKPLDFHERSHYKLAIGTSPG--QTSTTVFVDIVDCNNHAPMFSQSSYHGTFDE- 466

Query: 155 PLADLTPGSVIGKVEAADGDKGDR--VTLSLRGPYEKMFSIND-SGHISIVDLS--ALNT 209
              +++PG+ +  V A D D G+   VT S+  P    FSI+  SG IS   L    L  
Sbjct: 467 ---NISPGTSVLTVTATDNDSGENGFVTYSIAYPKSVPFSIDPYSGIISTSKLMDYELMQ 523

Query: 210 STIQLVVVATDTGNPPRQ 227
                 V A+D G+P RQ
Sbjct: 524 RLYHFQVWASDWGSPFRQ 541


>gi|157649916|gb|ABV59341.1| protocadherin mu2 [Callorhinchus milii]
          Length = 966

 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 72/250 (28%), Positives = 111/250 (44%), Gaps = 34/250 (13%)

Query: 92  SRQGDISLMQCLDYETEDSYRFTVYATDTL---MTTSATVNISVVNVNDWDPRFRYP--- 145
           S  G I      DYE   S++F V ATD     ++ + TVN+ +++ ND  P    P   
Sbjct: 512 SDSGIIFFQYAFDYEQIKSFQFIVQATDAGVPPLSDNVTVNVIILDQNDNSPEIISPLTM 571

Query: 146 -QYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEK---MFSIN-DSGHIS 200
              E+ +P    AD  PG ++ KV A D D G    LS + P  K   +F +  +SG I 
Sbjct: 572 KGLEVTVPR--SAD--PGYLVTKVIAVDADSGQNARLSYQLPEVKETELFQVGLNSGEIR 627

Query: 201 IV-DLSALNTSTIQLVVVATDTGNPPRQASVPAIMHFPEAIVQQAS--------SKLNSG 251
               L   + +  +LVV+  D G+P   ASV   +   E   Q  S        S+ +S 
Sbjct: 628 TARRLRDRDATVHRLVVLVKDQGHPSLSASVTINLSLLEDFAQNVSDVNLLIRKSEYSSD 687

Query: 252 TSSTVLIILGVVLIVLGFVIILLILYIHKNKHTKNNGPPGSSHSKNDSFLS----NVILP 307
            +  ++I LG +  VL   II L+  I +      +G      S N SF++    N +  
Sbjct: 688 IAFYLIIFLGTLSSVLFVAIIFLVFTICQADRNTTHG------SFNTSFIARRYTNDLFL 741

Query: 308 EKHVNVVAIP 317
           + +VN+  +P
Sbjct: 742 DSNVNLHTVP 751



 Score = 40.4 bits (93), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 52/231 (22%), Positives = 102/231 (44%), Gaps = 24/231 (10%)

Query: 13  LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTT--- 69
           L++ AI     +R   A ++++    +     F K  Y V+ +EN PV  +++ +     
Sbjct: 210 LILTAIDGGTPERSGTARIVITVLDVNDNVPVFDKTIYEVTLVENSPVGTLVIKLDATDI 269

Query: 70  NKPRDLRVKYWLSNDYGER----FSISRQ-GDISLMQCLDYETEDSYRFTVYATDT---L 121
           ++ R+  + Y L +   E+    FSI  Q G+I +   +D+E        + A D     
Sbjct: 270 DEGRNGDIVYNLHSHTSEKVRKLFSIEPQTGEIRVKGVVDFEEAAFVEINIEAKDKGPYP 329

Query: 122 MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGD---- 177
           +     V +++VN+ND  P F      LF   +P  D   G++I  +   D +  +    
Sbjct: 330 VPVRCKVIVNIVNINDNAPEF---TVSLFSSPVP-EDAPLGTMIALISLKDQESEENGEI 385

Query: 178 RVTLSLRGPYEKMFSINDSGHISIVDLSALNTSTI---QLVVVATDTGNPP 225
              ++ R P+  + +++     ++V    L+  T    + VV+  D+G+PP
Sbjct: 386 HCYIADRTPF--ILNLSSKNSYTLVTHQLLDRETTPQYKFVVICRDSGSPP 434



 Score = 38.1 bits (87), Expect = 7.7,   Method: Compositional matrix adjust.
 Identities = 42/138 (30%), Positives = 59/138 (42%), Gaps = 17/138 (12%)

Query: 101 QCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLA 157
           Q LD ET   Y+F V   D+    ++++ T  + V + ND  P F    Y     H+ + 
Sbjct: 411 QLLDRETTPQYKFVVICRDSGSPPLSSNKTFLVEVSDRNDNAPHFTQSSY---TTHV-ME 466

Query: 158 DLTPGSVIGKVEAADGDKGDRVTLS-------LRG-PYEKMFSI-NDSGHISI-VDLSAL 207
           +  PGS I  + A D D      LS       ++G P     SI +DSG I         
Sbjct: 467 NSAPGSSICALTAFDADLDANAYLSYSILESHIQGMPVSTYVSIGSDSGIIFFQYAFDYE 526

Query: 208 NTSTIQLVVVATDTGNPP 225
              + Q +V ATD G PP
Sbjct: 527 QIKSFQFIVQATDAGVPP 544


>gi|134025596|gb|AAI35973.1| pcdh7 protein [Xenopus (Silurana) tropicalis]
          Length = 907

 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 53/173 (30%), Positives = 81/173 (46%), Gaps = 11/173 (6%)

Query: 64  LLTVTTNKPRDLRVKYWLSNDYGERFSIS-RQGDISLMQCLDYETEDSYRFTVYATDT-- 120
           +L    +  ++  + Y L       FSI    GDI++   LD E  D Y F V A D   
Sbjct: 528 VLATDADSGKNAEIAYSLEPSMEGIFSIHPDTGDITVNIILDREQTDRYEFKVIAKDKGI 587

Query: 121 -LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRV 179
            ++  + +V + V + ND +PRF    +  ++      +L P S +G V   D DKG   
Sbjct: 588 PVLQGTTSVVVQVADRNDNEPRFMQDVFTFYVKE----NLQPNSPVGMVTVMDADKGRNA 643

Query: 180 TLSLRGPYEK-MFSI-NDSGHI-SIVDLSALNTSTIQLVVVATDTGNPPRQAS 229
            +SL    +  +FSI ND+G I S V     + ++    V A D G+PPR A+
Sbjct: 644 EMSLFIEEDSDIFSIENDTGTIYSTVSFDREHQTSYTFKVKAVDGGDPPRSAT 696



 Score = 40.0 bits (92), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 38/154 (24%), Positives = 66/154 (42%), Gaps = 30/154 (19%)

Query: 103 LDYETEDSYRFTVYATDTL---MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADL 159
           LD E  DSY  T+   D      ++ + + + + +VND +PRF    YE  L      + 
Sbjct: 237 LDREQRDSYELTLRVRDGGEPPRSSQSILRVLITDVNDNNPRFEKSVYEADLAE----NS 292

Query: 160 TPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSI------------NDSGHISI---VDL 204
            PG+ I ++ A D D G      + G  E +F               +SG +S+   +D 
Sbjct: 293 APGTPILQLRATDYDVG------VNGQIEYVFGAATESVRRLLRLDENSGWLSVLHRIDR 346

Query: 205 SALNTSTIQLVVVATDTGNPPRQASVPAIMHFPE 238
             +N   ++  V+A D G PP+      +++  +
Sbjct: 347 EEVN--QLRFTVMARDRGQPPKTDKATVVLNIKD 378


>gi|395542934|ref|XP_003773378.1| PREDICTED: protocadherin-7-like [Sarcophilus harrisii]
          Length = 1075

 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 49/142 (34%), Positives = 68/142 (47%), Gaps = 10/142 (7%)

Query: 95  GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFL 151
           GDI +   LD E  D Y F V A D    ++  S TV + V + ND DP+F    +  ++
Sbjct: 408 GDILVNTVLDREQTDRYEFKVTARDKGVPVLQGSTTVIVQVADKNDNDPKFMQDVFTFYV 467

Query: 152 PHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYE-KMFSI-NDSGHI-SIVDLSALN 208
                 +L P S +G V   D DKG    +SL    +  +FSI ND+G I S       +
Sbjct: 468 KE----NLQPNSPVGMVTVMDADKGRNAEMSLYIEEDGNIFSIENDTGTIYSTTAFDREH 523

Query: 209 TSTIQLVVVATDTGNPPRQASV 230
            +T    V A D G+PPR A+ 
Sbjct: 524 QTTYTFKVKAVDGGDPPRSATA 545



 Score = 51.2 bits (121), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 78/317 (24%), Positives = 137/317 (43%), Gaps = 48/317 (15%)

Query: 30  TLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVT---TNKPRDLRVKYWLSNDYG 86
           T+IV  A  +  + +F ++ ++    ENL  N  +  VT    +K R+  +  ++  D G
Sbjct: 443 TVIVQVADKNDNDPKFMQDVFTFYVKENLQPNSPVGMVTVMDADKGRNAEMSLYIEED-G 501

Query: 87  ERFSISRQ-GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRF 142
             FSI    G I      D E + +Y F V A D      + +ATV++ V++ ND  P  
Sbjct: 502 NIFSIENDTGTIYSTTAFDREHQTTYTFKVKAVDGGDPPRSATATVSLFVMDENDNAPTV 561

Query: 143 RYPQ---YELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR----GPYEKMFSIN- 194
            +P    Y L  P   +      +V+  V A D D G    L+       P+ K+F I+ 
Sbjct: 562 TFPSNVSYTLLPPSSNVR-----TVVATVLATDSDTGVNADLNFSIVGGNPF-KLFEIDA 615

Query: 195 DSGHISIV-DLSALNTSTIQLVVVATDTGNPPRQASVPAIMHFPEAIVQ------QASSK 247
            SG +S+V  L+  +    +LVV   D+G P +  +    +   E++        Q +  
Sbjct: 616 TSGVVSLVGKLAQKHYGLHRLVVQVNDSGQPSQSTTTLVHVFVNESVSNATVVDSQITRS 675

Query: 248 LNSGTSSTVL-------------IILGVVLIVLGFVIILLILYIHKNKHTKN-NGPPGSS 293
           L++  +  +              I++GVV  ++  ++I+LI+ + +   +KN NG     
Sbjct: 676 LHTPLTQDIAGDPSYEISKQRLSIVVGVVAGIMTVILIILIVVMARYCRSKNKNGYEAGK 735

Query: 294 HSKNDSFLSNVILPEKH 310
               D F      P++H
Sbjct: 736 KDHEDFF-----TPQQH 747


>gi|307133692|ref|NP_001128292.2| protocadherin 7 precursor [Xenopus (Silurana) tropicalis]
          Length = 1042

 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 53/174 (30%), Positives = 81/174 (46%), Gaps = 11/174 (6%)

Query: 64  LLTVTTNKPRDLRVKYWLSNDYGERFSISRQ-GDISLMQCLDYETEDSYRFTVYATDT-- 120
           +L    +  ++  + Y L       FSI    GDI++   LD E  D Y F V A D   
Sbjct: 528 VLATDADSGKNAEIAYSLEPSMEGIFSIHPDTGDITVNIILDREQTDRYEFKVIAKDKGI 587

Query: 121 -LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRV 179
            ++  + +V + V + ND +PRF    +  ++      +L P S +G V   D DKG   
Sbjct: 588 PVLQGTTSVVVQVADRNDNEPRFMQDVFTFYVKE----NLQPNSPVGMVTVMDADKGRNA 643

Query: 180 TLSLRGPYEK-MFSI-NDSGHI-SIVDLSALNTSTIQLVVVATDTGNPPRQASV 230
            +SL    +  +FSI ND+G I S V     + ++    V A D G+PPR A+ 
Sbjct: 644 EMSLFIEEDSDIFSIENDTGTIYSTVSFDREHQTSYTFKVKAVDGGDPPRSATA 697



 Score = 40.0 bits (92), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 38/142 (26%), Positives = 62/142 (43%), Gaps = 30/142 (21%)

Query: 103 LDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADL 159
           LD E  DSY  T+   D      ++ + + + + +VND +PRF    YE  L      + 
Sbjct: 237 LDREQRDSYELTLRVRDGGEPPRSSQSILRVLITDVNDNNPRFEKSVYEADLAE----NS 292

Query: 160 TPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSI------------NDSGHISI---VDL 204
            PG+ I ++ A D D G      + G  E +F               +SG +S+   +D 
Sbjct: 293 APGTPILQLRATDYDVG------VNGQIEYVFGAATESVRRLLRLDENSGWLSVLHRIDR 346

Query: 205 SALNTSTIQLVVVATDTGNPPR 226
             +N   ++  V+A D G PP+
Sbjct: 347 EEVN--QLRFTVMARDRGQPPK 366


>gi|218505787|ref|NP_001136241.1| protocadherin-15 isoform CD2-1 precursor [Homo sapiens]
          Length = 1790

 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 61/195 (31%), Positives = 100/195 (51%), Gaps = 14/195 (7%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGER-FSISRQ-GDISLMQ 101
           +F +  YS+   E + V  VLL +         + Y + N   +R F++S   G ++L +
Sbjct: 627 RFPQLMYSLEISEAMRVGAVLLNLQATDREGDSITYAIENGDPQRVFNLSETTGILTLGK 686

Query: 102 CLDYETEDSYRFTVYATDTL--MTTSATVNISVVNVNDWDPRFRYPQYELFLP-HIPLAD 158
            LD E+ D Y   + A+D     T++ATVNI V +VND  P F     + +LP ++ + +
Sbjct: 687 ALDRESTDRYILIITASDGRPDGTSTATVNIVVTDVNDNAPVF-----DPYLPRNLSVVE 741

Query: 159 LTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDSGHI-SIVDLSALNTSTIQLV 215
               + +G+V+A D D G   +V  SL G +  +F I  +G I + V L+       +LV
Sbjct: 742 EEANAFVGQVKATDPDAGINGQVHYSL-GNFNNLFRITSNGSIYTAVKLNREVRDYYELV 800

Query: 216 VVATDTGNPPRQASV 230
           VVATD    PR +++
Sbjct: 801 VVATDGAVHPRHSTL 815



 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 63/247 (25%), Positives = 106/247 (42%), Gaps = 32/247 (12%)

Query: 6   DFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYV-- 63
           DF Q   LV++A Q +     A A L +     + +   F+   Y    LE+ PV     
Sbjct: 361 DFHQKFDLVIKAEQDNGHPLPAFAGLHIEILDENNQSPYFTMPSYQGYILESAPVGATIS 420

Query: 64  --------LLTVTTNK------PRDLRVK----YWLSNDYGERFSISRQG---DISLMQC 102
                   L  V  +K      P  +  K    +   NDY   F++++ G    ++L+Q 
Sbjct: 421 DSLNLTSPLRIVALDKDIEDVPPSGVPTKDPELHLFLNDYTSVFTVTQTGITRYLTLLQP 480

Query: 103 LDYETEDSYRFTVYATDTLMTTSAT-VNISVVNVNDWDPRFRYPQYELFLPHIPLADLTP 161
           +D E + +Y F++ A D +  +    VNI V++ ND  P F    Y++++      D+ P
Sbjct: 481 VDREEQQTYTFSITAFDGVQESEPVIVNIQVMDANDNTPTFPEISYDVYV----YTDMRP 536

Query: 162 GSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSIND-SGHISIV-DLSALNTSTIQLVVV 217
           G  + ++ A D D+G    +T  +    +  F IN  +G I+I   +  +   T  L V 
Sbjct: 537 GDSVIQLTAVDADEGSNGEITYEILVGAQGDFIINKTTGLITIAPGVEMIVGRTYALTVQ 596

Query: 218 ATDTGNP 224
           A D   P
Sbjct: 597 AADNAPP 603



 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 71/233 (30%), Positives = 103/233 (44%), Gaps = 26/233 (11%)

Query: 13   LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKP 72
            LVV A       R++  TL +           F+ + Y+V   ENLP    +L +   K 
Sbjct: 799  LVVVATDGAVHPRHSTLTLAIKVLDIDDNSPVFTNSTYTVLVEENLPAGTTILQIEA-KD 857

Query: 73   RDL--RVKYWLSNDYGERFSISR--QGDISLMQCLDYET----EDSYRFTVYATD---TL 121
             DL   V Y + +   + F       G++SL++ LDYE     E S  F V A D   T+
Sbjct: 858  VDLGANVSYRIRSPEVKHFFALHPFTGELSLLRSLDYEAFPDQEASITFLVEAFDIYGTM 917

Query: 122  MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDK----GD 177
                ATV + V ++ND+ P F    Y+  +      D   G+ I  V A D D       
Sbjct: 918  PPGIATVTVIVKDMNDYPPVFSKRIYKGMV----APDAVKGTPITTVYAEDADPPGLPAS 973

Query: 178  RVTL---SLRGPY-EKMFSIN-DSGH-ISIVDLSALNTSTIQLVVVATDTGNP 224
            RV      ++ PY   +F +  DSG  I+ V+L+   T+  +LVVVA D G P
Sbjct: 974  RVRYRVDDVQFPYPASIFEVEEDSGRVITRVNLNEEPTTIFKLVVVAFDDGEP 1026



 Score = 45.4 bits (106), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 56/119 (47%), Gaps = 8/119 (6%)

Query: 76  RVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDTLMT---TSATVNISV 132
           +V Y L N +   F I+  G I     L+ E  D Y   V ATD  +    ++ T+ I V
Sbjct: 763 QVHYSLGN-FNNLFRITSNGSIYTAVKLNREVRDYYELVVVATDGAVHPRHSTLTLAIKV 821

Query: 133 VNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMF 191
           ++++D  P F    Y + +      +L  G+ I ++EA D D G  V+  +R P  K F
Sbjct: 822 LDIDDNSPVFTNSTYTVLVEE----NLPAGTTILQIEAKDVDLGANVSYRIRSPEVKHF 876


>gi|397501091|ref|XP_003821231.1| PREDICTED: protocadherin-15-like, partial [Pan paniscus]
          Length = 1136

 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 61/195 (31%), Positives = 100/195 (51%), Gaps = 14/195 (7%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGER-FSISRQ-GDISLMQ 101
           +F +  YS+   E + V  VLL +         + Y + N   +R F++S   G ++L +
Sbjct: 627 RFPQLMYSLEISEAMRVGAVLLNLQATDREGDSITYAIENGDPQRVFNLSETTGILTLGK 686

Query: 102 CLDYETEDSYRFTVYATDTL--MTTSATVNISVVNVNDWDPRFRYPQYELFLP-HIPLAD 158
            LD E+ D Y   + A+D     T++ATVNI V +VND  P F     + +LP ++ + +
Sbjct: 687 ALDRESTDRYILIITASDGRPDGTSTATVNIVVTDVNDNAPVF-----DPYLPRNLSVVE 741

Query: 159 LTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDSGHI-SIVDLSALNTSTIQLV 215
               + +G+V+A D D G   +V  SL G +  +F I  +G I + V L+       +LV
Sbjct: 742 EEANAFVGQVKATDPDAGINGQVHYSL-GNFNNLFRITSNGSIYTAVKLNREVRDYYELV 800

Query: 216 VVATDTGNPPRQASV 230
           VVATD    PR +++
Sbjct: 801 VVATDGAVHPRHSTL 815



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 63/247 (25%), Positives = 107/247 (43%), Gaps = 32/247 (12%)

Query: 6   DFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYV-- 63
           DF Q   LV++A Q +     A A+L +     + +   F+   Y    LE+ PV     
Sbjct: 361 DFHQKFDLVIKAEQDNGHPLPAFASLHIEILDENNQSPYFTMPSYQGYILESAPVGATIS 420

Query: 64  --------LLTVTTNK------PRDLRVK----YWLSNDYGERFSISRQG---DISLMQC 102
                   L  V  +K      P  +  K    +   NDY   F++++ G    ++L+Q 
Sbjct: 421 DSLNLTSPLRIVALDKDIEDVPPSGVPTKDPELHLFLNDYTSVFTVTQTGITRYLTLLQP 480

Query: 103 LDYETEDSYRFTVYATDTLMTTSAT-VNISVVNVNDWDPRFRYPQYELFLPHIPLADLTP 161
           +D E + +Y F++ A D +  +    VNI V++ ND  P F    Y++++      D+ P
Sbjct: 481 VDREEQQTYTFSITAFDGVQESEPVIVNIQVMDANDNTPTFPEISYDVYV----YTDMRP 536

Query: 162 GSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSIND-SGHISIV-DLSALNTSTIQLVVV 217
           G  + ++ A D D+G    +T  +    +  F IN  +G I+I   +  +   T  L V 
Sbjct: 537 GDSVIQLTAVDADEGSNGEITYEILVGAQGDFIINKTTGLITIAPGVEMIVGRTYALTVQ 596

Query: 218 ATDTGNP 224
           A D   P
Sbjct: 597 AADNAPP 603



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 70/233 (30%), Positives = 103/233 (44%), Gaps = 26/233 (11%)

Query: 13   LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKP 72
            LVV A       R++  TL +           F+ + Y++   ENLP    +L +   K 
Sbjct: 799  LVVVATDGAVHPRHSTLTLAIKVLDIDDNSPVFTNSTYTILVEENLPAGTTILQIEA-KD 857

Query: 73   RDL--RVKYWLSNDYGERFSISR--QGDISLMQCLDYET----EDSYRFTVYATD---TL 121
             DL   V Y + +   + F       G++SL++ LDYE     E S  F V A D   T+
Sbjct: 858  VDLGANVSYRIRSPEVKHFFALHPFTGELSLLRSLDYEAFPDQEASITFLVEAFDIYGTM 917

Query: 122  MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDK----GD 177
                ATV + V ++ND+ P F    Y+  +      D   G+ I  V A D D       
Sbjct: 918  PPGIATVTVIVKDMNDYPPVFSKRIYKGMV----APDAVKGTPITTVYAEDADPPGLPAS 973

Query: 178  RVTL---SLRGPY-EKMFSIN-DSGH-ISIVDLSALNTSTIQLVVVATDTGNP 224
            RV      ++ PY   +F +  DSG  I+ V+L+   T+  +LVVVA D G P
Sbjct: 974  RVRYRVDDVQFPYPASIFDVEEDSGRVITRVNLNEEPTTIFKLVVVAFDDGEP 1026



 Score = 46.6 bits (109), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 56/119 (47%), Gaps = 8/119 (6%)

Query: 76  RVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDTLMT---TSATVNISV 132
           +V Y L N +   F I+  G I     L+ E  D Y   V ATD  +    ++ T+ I V
Sbjct: 763 QVHYSLGN-FNNLFRITSNGSIYTAVKLNREVRDYYELVVVATDGAVHPRHSTLTLAIKV 821

Query: 133 VNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMF 191
           ++++D  P F    Y + +      +L  G+ I ++EA D D G  V+  +R P  K F
Sbjct: 822 LDIDDNSPVFTNSTYTILVEE----NLPAGTTILQIEAKDVDLGANVSYRIRSPEVKHF 876


>gi|47209327|emb|CAF93462.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 699

 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 59/201 (29%), Positives = 96/201 (47%), Gaps = 23/201 (11%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGE-------RFSISRQ-GD 96
           FS+  Y  S  EN PV  ++LT+T     D  +   ++ D+G         FSI ++ GD
Sbjct: 167 FSQGVYKASLQENSPVGTIILTLTATDA-DAGINGDVTYDFGHISEDIKSVFSIDQKSGD 225

Query: 97  ISLMQCLDYETEDSYRFTVYATDTL-MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIP 155
           I LM  +D+E   ++   V A D L +T+ A V I V +VND  P          +P   
Sbjct: 226 IKLMTMVDFEATATFELRVTAKDGLGLTSYAKVIIDVTDVNDNAPVIHLKSLTNPIPE-- 283

Query: 156 LADLTPGSVIGKVEAADGDKGD----RVTLSLRGPYEKMFSINDSGHISIVDLSALN--- 208
             +++PGS +G +   D D  +    R ++    P++ + SI +  + S+V    L+   
Sbjct: 284 --NVSPGSEVGIINVQDRDSENNRQVRCSIQQNVPFKLVASIKN--YYSLVTTGQLDREL 339

Query: 209 TSTIQLVVVATDTGNPPRQAS 229
            S   + + ATD G+PP  +S
Sbjct: 340 VSDYNITISATDEGSPPLSSS 360



 Score = 40.4 bits (93), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 70/261 (26%), Positives = 113/261 (43%), Gaps = 35/261 (13%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRDLR----VKYWL--SNDYGERFS--ISRQGD 96
           F +  YS    EN      L +V+   P D R    V Y L  +   G   S  +S  GD
Sbjct: 377 FEEQSYSAYVSENNRAGSTLCSVSARDP-DWRQNGTVIYSLLAAEVSGAPVSSYVSVNGD 435

Query: 97  ---ISLMQCLDYETEDSYRFTVYATDTL---MTTSATVNISVVNVNDWDPRFRYPQYE-- 148
              I  ++  DYE   S++  V A D     ++++ +V++ V +VND  P+  YP  E  
Sbjct: 436 TGVIHAVRSFDYEQLRSFKVHVMARDNGSPPLSSNVSVSVFVSDVNDNPPQILYPAPEGN 495

Query: 149 LFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-DSGHISIV-D 203
            F+  +       GS++ KV A D D G    LS   ++     +F+I   SG I    D
Sbjct: 496 SFMTELVPKAAHGGSLVSKVIAVDADSGQNAWLSYHIVQSSDPGLFTIGVHSGEIRTQRD 555

Query: 204 LSALNTSTIQLVVVATDTGNPPRQASVPAIMHFPEAIV----------QQASSKLNSGTS 253
           +S  ++    L+V   D G P   A+    +   + +           ++ +SKL   TS
Sbjct: 556 ISESDSMKQNLIVAVKDNGQPSLSATCSMYLLISDNLAEVPELKDISYEEKNSKL---TS 612

Query: 254 STVLIILGVVLIVLGFVIILL 274
             ++ ++ V    L F+II+L
Sbjct: 613 YLIIALVCVSTFFLTFIIIIL 633


>gi|156398552|ref|XP_001638252.1| predicted protein [Nematostella vectensis]
 gi|156225371|gb|EDO46189.1| predicted protein [Nematostella vectensis]
          Length = 1852

 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 52/157 (33%), Positives = 81/157 (51%), Gaps = 11/157 (7%)

Query: 81  LSNDYGERFSIS-RQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVN 136
           +S + G  F +  R G +S+   LD ET  SY   V A+D      + +A++++SV++VN
Sbjct: 829 ISGNQGNSFQLDPRSGILSVRSTLDRETIPSYTLVVKASDAGSPQQSITASIHVSVLDVN 888

Query: 137 DWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDR--VTLSLRGPYEKMFSIN 194
           D  PRF   +  LF   I   D +  S + +V+  D D+G    +TLSL G     F+I+
Sbjct: 889 DNAPRF---EKSLFSGEI-REDASVHSTVLQVKVEDKDEGSNGAITLSLSGEGSDNFTID 944

Query: 195 DSGHI-SIVDLSALNTSTIQLVVVATDTGNPPRQASV 230
            +G + S   L    T+  QL V A D G+P + A+ 
Sbjct: 945 STGFVLSKTPLDYETTAAYQLTVTARDGGSPSKSATA 981



 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 64/228 (28%), Positives = 106/228 (46%), Gaps = 20/228 (8%)

Query: 12   TLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTT-- 69
            TLVVRA +  +Q         +     +     F+   Y+ S  ENLP+   +  VT   
Sbjct: 1066 TLVVRATETGSQGESVYNNATIRVLDVNDNAPVFNPGSYAKSLHENLPIGQTVAKVTATD 1125

Query: 70   -NKPRDLRVKYWLSNDYGERFSIS-RQGDISLMQCLDYETEDSYRFTVYATDT---LMTT 124
             ++  + +V Y LS     +F ++   G ++  + LD E + SY   V A D      + 
Sbjct: 1126 RDEGENAKVTYELSVGDTSKFEVNPATGLVTTKRPLDREDQASYSLRVTAMDHGKPSQSA 1185

Query: 125  SATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLS 182
             A + +++ ++ND  P+F   +Y L +      +   GS I +V A+D D G   RVT S
Sbjct: 1186 VAAITLTINDLNDNSPQFSQSKYTLTVTE----NTANGSNILRVLASDPDAGANGRVTYS 1241

Query: 183  -LRGPYEKMFSIND-SGHIS---IVDLSALNTSTIQLVVVATDTGNPP 225
             + G +   F I+  +G I+   +VD  AL  ++  L + A D+G PP
Sbjct: 1242 IISGNHGNAFRIDSTTGRITVVGVVDREAL--ASYNLTISAKDSGVPP 1287



 Score = 54.7 bits (130), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 62/208 (29%), Positives = 101/208 (48%), Gaps = 26/208 (12%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYW-LSNDYGERFSISR-QGDIS 98
           QF+K+ Y+ +  ENL     +  VT    +   + ++ Y  LS +    F++ R  G+I+
Sbjct: 684 QFAKSLYTCTVGENLAAGVAVCYVTATDADSGANGKISYSILSGNENMAFAMDRFTGEIT 743

Query: 99  LMQCLDYETEDSYRFTVYATDTLMT---TSATVNISVVNVNDWDPRFRYPQYELFLPHIP 155
               LD ET  SY  T+ A D  +     + TVNIS+ + ND  P F  P          
Sbjct: 744 TRVPLDRETIASYSLTINADDGSLVRFMAATTVNISIADENDNQPTFTGPS------RFN 797

Query: 156 LADLTP-GSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-DSGHISIVDLSALNTS 210
           +++ +P G+ +G++ A D D G    ++   + G     F ++  SG +S+   S L+  
Sbjct: 798 ISEDSPTGTRVGQLTATDRDIGPNGAVTYAIISGNQGNSFQLDPRSGILSV--RSTLDRE 855

Query: 211 TI---QLVVVATDTGNPPRQASVPAIMH 235
           TI    LVV A+D G+P  Q S+ A +H
Sbjct: 856 TIPSYTLVVKASDAGSP--QQSITASIH 881



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 64/220 (29%), Positives = 102/220 (46%), Gaps = 14/220 (6%)

Query: 12   TLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTT-- 69
            TLVV+A    +  +   A++ VS    +    +F K+ +S    E+  V+  +L V    
Sbjct: 861  TLVVKASDAGSPQQSITASIHVSVLDVNDNAPRFEKSLFSGEIREDASVHSTVLQVKVED 920

Query: 70   -NKPRDLRVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTS 125
             ++  +  +   LS +  + F+I   G +     LDYET  +Y+ TV A D      + +
Sbjct: 921  KDEGSNGAITLSLSGEGSDNFTIDSTGFVLSKTPLDYETTAAYQLTVTARDGGSPSKSAT 980

Query: 126  ATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSL-R 184
            A V I+++NVND  P F  P     +P     D+   + + K+ A D D G  +T  +  
Sbjct: 981  AQVKITIINVNDNVPSFVSPAQVTSIPE----DVAINTHVVKLNATDSD-GTPLTFDIVE 1035

Query: 185  GPYEKMFSIN-DSGHISIVD-LSALNTSTIQLVVVATDTG 222
            G     F I+  SG IS+   L    T+   LVV AT+TG
Sbjct: 1036 GNAGSSFKIDQSSGLISVAKRLDRETTANYTLVVRATETG 1075



 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 62/192 (32%), Positives = 84/192 (43%), Gaps = 18/192 (9%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKP-----RDLRVKYWLSNDYGERFSI-SRQGDIS 98
            F+   Y  S  EN   +  +LTV  +         LR      ND  +RF I S  G I 
Sbjct: 1412 FNSQSYIGSVRENSAQSTSVLTVAADDSDVGANAVLRYSIISGNDE-KRFKINSTSGVIM 1470

Query: 99   LMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLAD 158
                LD+E +  Y   V ATD+  T    V I V+N+ND  P F    Y      +    
Sbjct: 1471 TTTPLDFEEKSQYGLEVTATDSKYTAKTNVTIRVINLNDITPAFTQQNY---TASVRENS 1527

Query: 159  LTPGSVIGKVEAADGDKGDRVTLSLRGPYEK-MFSIND-SGHISIVDLSALNTSTIQLVV 216
             T  SV+ KV A+D D    ++ S+ G  +   FSI+  SG IS  D+  L+   + L  
Sbjct: 1528 PTSTSVV-KVSASDRDSFGSLSYSIVGGKDSDKFSIDQRSGIISTADV--LDRELVSLYA 1584

Query: 217  V---ATDTGNPP 225
            +    TD GNPP
Sbjct: 1585 IQVRVTDAGNPP 1596



 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 55/194 (28%), Positives = 91/194 (46%), Gaps = 12/194 (6%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTTNKPR--DLRVKYWLSNDYGERFSISRQGDISLMQ 101
           +F  N Y  +  EN P   V +   T++    +  + Y L +   +    S+ G+I  + 
Sbjct: 69  EFPLNSYVFNIRENTPAAQVAIVTATDRDSGTNAAITYSLFSGENKFMMNSKTGEIRTVT 128

Query: 102 CLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTP 161
            LD+ET+DSY   + A D   TT   + I+V +VND  P F    Y+  +      D+  
Sbjct: 129 PLDHETKDSYTMRISAFDGKHTTFVPL-ITVDDVNDNAPFFALSVYKTGV----YEDVAV 183

Query: 162 GSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDSGHISIVDLSALNT-STIQLVVVA 218
           GS++ ++ A D D G   R++ SL       F+++  G I         T ++ Q+ + A
Sbjct: 184 GSIVRQLTAVDLDVGINARLSYSLVSGDTSYFTVDSQGVIRTKGAFDRETKASYQVALRA 243

Query: 219 TDTGNPPR--QASV 230
            D G+P R  QA+V
Sbjct: 244 QDGGSPSRSGQATV 257



 Score = 43.9 bits (102), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 63/199 (31%), Positives = 92/199 (46%), Gaps = 24/199 (12%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTT----NKPRDLRVKYWL-SNDYGERFSI-SRQGDIS 98
           FS + YS    E+  +   ++TVT     + PR  R++Y L S +    F+I +  G I 
Sbjct: 478 FSPSNYSKQIPESTVIGSTVVTVTATDLDSGPRG-RLEYRLISGNVKGAFNIDANSGSIR 536

Query: 99  LMQCLDYETEDSYRFTVYATDTLMTTSAT---VNISVVNVNDWDPRFRYPQYELFLPHIP 155
           +   LD ET  SY   V A D   T+ ++   V I++ ++ND  P F+ P Y   +    
Sbjct: 537 VSSELDRETTPSYSLQVEARDGGSTSRSSSTRVTIALQDINDNSPIFQGP-YVFRVSESS 595

Query: 156 LADLTPGSVIGKVEAADGD---KGD-RVTLSLRGPYEKMFSINDS-GHISI-VDLSALNT 209
               +PG  IG+V A D D    GD R  LS       +FSIN S G I++   L     
Sbjct: 596 ----SPGHQIGQVAATDADDSSNGDVRYALS---DNTDVFSINTSTGLITLKTQLDYEKK 648

Query: 210 STIQLVVVATDTGNPPRQA 228
           +   + V A D G P R +
Sbjct: 649 TQYMVTVTAKDGGTPSRSS 667


>gi|351696801|gb|EHA99719.1| Protocadherin Fat 1 [Heterocephalus glaber]
          Length = 4589

 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 62/217 (28%), Positives = 106/217 (48%), Gaps = 18/217 (8%)

Query: 29   ATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTV-TTNKPRDL--RVKYWLSNDY 85
            A + V+  G +L    F +NEY V   EN P++ +++ V  T+K   +   + Y + ND+
Sbjct: 2477 AQVHVTVIGGNLHSPVFPQNEYEVELAENAPIHTLVIEVKATDKDSGIYGHITYSIVNDF 2536

Query: 86   G-ERFSISRQGDISLMQCLDYET--EDSYRFTVYATDTLMTTS-ATVNISVVNVNDWDPR 141
              +RF  +  G +  ++ LD ET  E      + A DT    +  T+N+ + + ND  P+
Sbjct: 2537 ARDRFYTNEIGQVFTLEKLDRETLAEKVISVRLMAKDTGGKVAFCTINVILTDDNDNAPQ 2596

Query: 142  FRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDR--VTLSLRGPYEKM---FSIND- 195
            FR  +YE+ +     +    G+ + KV A+D D+G    VT ++    + +     IN  
Sbjct: 2597 FRATKYEVNIG----SSAAKGTSVMKVFASDTDEGSNADVTYAIEADSDSVKENLEINKL 2652

Query: 196  SGHISIVD-LSALNTSTIQLVVVATDTGNPPRQASVP 231
            SG I+  + L  L        V A D G+PP+++ VP
Sbjct: 2653 SGIITTKESLIGLENEFFTFFVRAIDNGSPPKESVVP 2689



 Score = 57.8 bits (138), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 52/218 (23%), Positives = 101/218 (46%), Gaps = 22/218 (10%)

Query: 33   VSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGERFSIS 92
            +SK   S   + F ++ ++ + +E+ PV +++  ++   P        +  ++   F I 
Sbjct: 1347 ISKPKPSPEPISFEESFFTFTVMESDPVAHMIGVISVEPPGTPLWFDIIGGNFDSHFDID 1406

Query: 93   R-QGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFL 151
            +  G I + + LD E + +Y  TV ATD      + V I V++ ND  P+F   +YE+ +
Sbjct: 1407 KGTGTIVIAKPLDAEQKSNYNLTVEATDGTTAIHSQVLIKVIDTNDHRPQFSTSKYEVVI 1466

Query: 152  PHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYE----KMFSIN-DSGHISI---VD 203
            P     D  P + I ++ A D D+ +++  +L+   +    K F ++  SG +S    +D
Sbjct: 1467 PE----DTVPETEILQISAMDKDEKNKLIYTLQSSIDPLSLKKFRLDPASGSLSTSEKLD 1522

Query: 204  LSALNTSTIQLVVVATDTGNPPRQASVPAIMHFPEAIV 241
              A++   + ++V         R   VP   +F   IV
Sbjct: 1523 HEAVHQHVLTVMV---------RDQDVPVKRNFARIIV 1551



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 61/203 (30%), Positives = 98/203 (48%), Gaps = 27/203 (13%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSN-DYGERFSIS-RQGDISLMQC 102
            F K  YS    EN+ ++  ++ V  N P  L+V Y +++ D   +F+I+   G I+++  
Sbjct: 2183 FEKPFYSAEIPENIQMHSPVVHVQANSPEGLKVFYSITDGDPFSQFTINFNTGVINVIAP 2242

Query: 103  LDYETEDSYRFTVYATDTLMTTSATVNISVV--NVNDWDPRFRYPQYELFLPHIPLADLT 160
            LD+E+  +Y+ ++ ATD+L    A V + ++  ++ND  P F    Y         A L+
Sbjct: 2243 LDFESHPAYKLSIRATDSLTGAHAEVFVDIIVEDINDNPPVFVQQSYS--------ATLS 2294

Query: 161  PGSVIG----KVEAADGDK--GDRVTLSLRGPYEK---MFSINDS-GHISIVDLSALNTS 210
              SVIG    KV A D D      ++  + G + K    F I+ S G IS+  L  L+  
Sbjct: 2295 EASVIGTSVVKVRATDSDSEPNRGISYQMFGNHSKSQDHFHIDGSTGLISL--LRTLDYE 2352

Query: 211  TIQ---LVVVATDTGNPPRQASV 230
              Q   + V A D G PP  + V
Sbjct: 2353 QFQQHKIFVRAIDGGMPPLSSDV 2375



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 80/303 (26%), Positives = 140/303 (46%), Gaps = 32/303 (10%)

Query: 5    DDFLQPI-TLVVRAI-QYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNY 62
            D  LQ + TLV++A+ Q   +   A  T++VS    +     F   EY  +  E++ +  
Sbjct: 3189 DRELQAVYTLVLKAVDQGLPRKLSATGTVVVSVLDINDNPPVFEYREYGATVSEDILIGT 3248

Query: 63   VLLTVTTNKPRDLRVKYWLS------NDYGERFSI-SRQGDISLMQCLDYETEDSYRFTV 115
             +L V     RD+     ++      N++G +FSI S+ G I +++ LDYE+   Y  TV
Sbjct: 3249 EVLQVYA-ASRDIEANAEITYSIINGNEHG-KFSIDSKTGAIFIIENLDYESAHEYYLTV 3306

Query: 116  YATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAAD 172
             ATD     ++  AT NI+V ++ND  P F    Y   +    + + +  +V+   + AD
Sbjct: 3307 EATDGGTPSLSDVATANINVTDINDNTPSFSQDTYMAVISEDAVLEQSVITVLA--DDAD 3364

Query: 173  GDKGDRVTLS-LRGPYEKMFSIND-SGHISIVDLSALNTSTIQ---LVVVATDTGNPPRQ 227
            G     +  S + G     F+I+   G + +  L  L+  TI    L + A+D G+PPR 
Sbjct: 3365 GPSNSLIHYSIIEGNQGSPFTIDPVKGEVKVTKL--LDRETISGYTLTIQASDNGSPPRV 3422

Query: 228  ASVPAIMHFPEAIVQQASSKLNSGTSSTVLIILGVVLIVLGFVIILLILYIHKNKHTKNN 287
             +    +   +  V   +   + G  S ++     V    GF ++ L++    +K + +N
Sbjct: 3423 NTTTVNIDVSD--VNDNAPVFSKGNYSVIIQENKPV----GFSVLQLVV---TDKDSSHN 3473

Query: 288  GPP 290
            GPP
Sbjct: 3474 GPP 3476



 Score = 55.5 bits (132), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 43/145 (29%), Positives = 70/145 (48%), Gaps = 8/145 (5%)

Query: 90   SISRQGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYEL 149
            +I  +  + + + LD E +DSY  T+ ATD   ++ A V + V++ ND  P      Y  
Sbjct: 2972 NIQNEWKVYVKKPLDREKKDSYLLTITATDGTFSSKAIVEVKVLDANDNSPVCEKTLYSD 3031

Query: 150  FLPHIPLADLTPGSVIGKVEAADGD--KGDRVTLSLRGPYEKMFSIN-DSGHI-SIVDLS 205
             +P     D  PG +I +V A D D      +T +L G   + F +N D+G + ++  L 
Sbjct: 3032 TIPE----DALPGKLIVQVSATDADIRSNAEITYTLFGSGAEKFKVNPDTGELKTLAPLD 3087

Query: 206  ALNTSTIQLVVVATDTGNPPRQASV 230
                +   L+V ATD G    QA++
Sbjct: 3088 REEQAVYNLLVRATDGGGRFCQANI 3112



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 62/225 (27%), Positives = 103/225 (45%), Gaps = 19/225 (8%)

Query: 13   LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKP 72
            L+VRA   D   R+  A +++     +    QF+ + Y+V+  EN     +L  V     
Sbjct: 3096 LLVRAT--DGGGRFCQANIVLPLEDVNDNAPQFTADPYTVTVFENTEPGTLLTRVQATDA 3153

Query: 73   R---DLRVKYWLSNDYGERFSISR-QGDISLMQCLDYETEDSYRFTVYATDT----LMTT 124
                + ++ Y L +    +FSI+   G I L + LD E +  Y   + A D      ++ 
Sbjct: 3154 DTGLNRKISYSLIDSANGQFSINEISGIIQLEKPLDRELQAVYTLVLKAVDQGLPRKLSA 3213

Query: 125  SATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAA--DGDKGDRVTLS 182
            + TV +SV+++ND  P F Y +Y   +      D+  G+ + +V AA  D +    +T S
Sbjct: 3214 TGTVVVSVLDINDNPPVFEYREYGATVSE----DILIGTEVLQVYAASRDIEANAEITYS 3269

Query: 183  -LRGPYEKMFSIND-SGHISIVD-LSALNTSTIQLVVVATDTGNP 224
             + G     FSI+  +G I I++ L   +     L V ATD G P
Sbjct: 3270 IINGNEHGKFSIDSKTGAIFIIENLDYESAHEYYLTVEATDGGTP 3314



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 48/157 (30%), Positives = 73/157 (46%), Gaps = 33/157 (21%)

Query: 87   ERFSISRQ-GDISLMQCLDYETEDSYRFTVYATDTL----MTTSATVNISVVNVNDWDPR 141
            E F I RQ G + L + LD+ET   Y+F++ A  T     +  S  V+I V + ND  P 
Sbjct: 2750 EFFVIDRQSGRVKLEKSLDHETTKWYQFSILARCTHDEYEVVASVDVSIQVKDANDNTPV 2809

Query: 142  FRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSGHISI 201
            F    YE F+    + +L  GS + +V A+D D G      + G    M+S++ S  + I
Sbjct: 2810 FESNPYEAFI----VENLPGGSRVIQVRASDLDSG------MNG--HVMYSLDQSQSVDI 2857

Query: 202  VDLSALNTST----------------IQLVVVATDTG 222
            ++  A+N  T                 Q+ VVA+D G
Sbjct: 2858 IESFAINMETGWITTLKELDHEERDIYQIKVVASDHG 2894



 Score = 42.7 bits (99), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 45/169 (26%), Positives = 79/169 (46%), Gaps = 18/169 (10%)

Query: 76   RVKYWLSNDYGERFSIS-RQGDISLMQCLDYETEDSYRFTVYATDTL-MTTSATVNISVV 133
             + Y L     E+F ++   G++  +  LD E +  Y   V ATD       A + + + 
Sbjct: 3058 EITYTLFGSGAEKFKVNPDTGELKTLAPLDREEQAVYNLLVRATDGGGRFCQANIVLPLE 3117

Query: 134  NVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMF 191
            +VND  P+F    Y + +      +  PG+++ +V+A D D G   +++ SL       F
Sbjct: 3118 DVNDNAPQFTADPYTVTV----FENTEPGTLLTRVQATDADTGLNRKISYSLIDSANGQF 3173

Query: 192  SIND-SGHISI-----VDLSALNTSTIQLVVVATDTGNPPRQASVPAIM 234
            SIN+ SG I +      +L A+ T    LV+ A D G P + ++   ++
Sbjct: 3174 SINEISGIIQLEKPLDRELQAVYT----LVLKAVDQGLPRKLSATGTVV 3218



 Score = 42.4 bits (98), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 50/194 (25%), Positives = 84/194 (43%), Gaps = 18/194 (9%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTTNKPRDL----RVKYWLSNDYGERFSISRQGDISL 99
            +F +  Y V   E+  +N  ++ V     +DL     V Y +  D  +    S  G + +
Sbjct: 822  EFLQESYFVEVNEDKEINSEIIQVEATD-KDLGSNGHVTYSILTDTDKFLIDSTTGVVKI 880

Query: 100  MQCLDYETEDSYRFTVYATDTL-----MTTSATVNISVVNVNDWDPRFRYPQYELFLPHI 154
            +  LD E +  +   + A D       + ++  + +S+ +VND  P+F  P Y + +   
Sbjct: 881  VHPLDREVQHVHYLKIEARDQAKGEPQLFSTVLLKVSLEDVNDNPPKFIPPNYRVKV--- 937

Query: 155  PLADLTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSIND-SGHISIV-DLSALNTS 210
               DL  G++I  +EA D D G   +V  SL    E +F ++  SG + I+  L      
Sbjct: 938  -REDLPEGTIIVWLEAHDPDLGQSSQVRYSLLDHGEGIFDVDKLSGAVRIIQQLDFERKQ 996

Query: 211  TIQLVVVATDTGNP 224
               L V A D G P
Sbjct: 997  VYNLTVRAKDKGKP 1010



 Score = 42.0 bits (97), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 61/230 (26%), Positives = 94/230 (40%), Gaps = 38/230 (16%)

Query: 44   QFSKNEYSVSALEN-LPVNYVLLTVTTNKPRDLRVKYWLSNDYG----ERFSIS-RQGDI 97
            QFS ++Y V   E+ +P   +L     +K    ++ Y L +       ++F +    G +
Sbjct: 1456 QFSTSKYEVVIPEDTVPETEILQISAMDKDEKNKLIYTLQSSIDPLSLKKFRLDPASGSL 1515

Query: 98   SLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHI 154
            S  + LD+E    +  TV   D    +    A + ++V + ND  P F    YE  +   
Sbjct: 1516 STSEKLDHEAVHQHVLTVMVRDQDVPVKRNFARIIVNVSDTNDHAPWFTSSSYEGRVYES 1575

Query: 155  PLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSGHI--------------S 200
              A    GSV+ +V A D DKG           E ++SI +SG+I              +
Sbjct: 1576 AAA----GSVVLQVTALDKDKGKNA--------EVLYSI-ESGNIGNSFTIDPILGSIKT 1622

Query: 201  IVDLSALNTSTIQLVVVATDTGNPPRQASVPAIMHFPEAIVQQASSKLNS 250
              +L   N     L+V ATD GNPP   S    +H    +   AS K  S
Sbjct: 1623 AKELDRSNQEEYDLMVKATDKGNPP--MSEMTSVHIFVTVADNASPKFTS 1670



 Score = 40.4 bits (93), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 42/161 (26%), Positives = 71/161 (44%), Gaps = 12/161 (7%)

Query: 45   FSKNEYSVSALENLPVNY-VLLTVTTNKPRDLRVKYWL----SNDYGERFSISRQGDISL 99
            FSK  YSV   EN PV + VL  V T+K        +     S +    F +++QG +  
Sbjct: 3441 FSKGNYSVIIQENKPVGFSVLQLVVTDKDSSHNGPPFFFSIVSGNDDRAFEVNQQGVLLT 3500

Query: 100  MQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
               +  + ++ Y   V   D     +++   ++I V+  +   P       E+F+     
Sbjct: 3501 SATIQRKVKEHYLLHVKVADNGKPQLSSLTHIDIRVIEESIHPPAIL--PLEIFI--TAF 3556

Query: 157  ADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSG 197
             +   G VIGK+ A D D  D +T SL    + +FS++ +G
Sbjct: 3557 GEEYSGGVIGKIHATDQDVYDTLTYSLDPDMDSLFSVSSTG 3597



 Score = 39.7 bits (91), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 51/190 (26%), Positives = 82/190 (43%), Gaps = 28/190 (14%)

Query: 56   ENLPVNYVLLTVTTNKP---RDLRVKYWLSNDYG-ERFSISRQ-GDISLMQCLDYETEDS 110
            E++P+   ++TV+ +     RD  ++Y + +  G   F I  + G +     LD E+   
Sbjct: 1046 EDVPIGSSIMTVSAHDEDTGRDGEIQYSIRDGSGVGVFKIDEETGVLETSDLLDRESMSH 1105

Query: 111  YRFTVYATDTL---MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGK 167
            Y  TVYA D     +++   + I + +VND  P+   P   ++ P I        SV+ +
Sbjct: 1106 YWLTVYAADRAVVPLSSFIEIYIEIEDVNDNAPQTSEP---VYYPEIMENSPKDISVV-Q 1161

Query: 168  VEAADGDKGDRVTLSLRGPYEKMFSINDSGHISIVDLSALNTSTIQ-----------LVV 216
            +EA D D      L       K+ S N  G  SI   + L T+T +           L V
Sbjct: 1162 IEAFDPDSSSNDKLMY-----KITSGNPQGFFSIHPKTGLITTTSRRLDREQQDEHILEV 1216

Query: 217  VATDTGNPPR 226
              TD G PP+
Sbjct: 1217 TVTDNGTPPK 1226



 Score = 38.1 bits (87), Expect = 7.5,   Method: Compositional matrix adjust.
 Identities = 39/121 (32%), Positives = 57/121 (47%), Gaps = 11/121 (9%)

Query: 95   GDISLMQCLDYETEDSYRFTVYATDTLM---TTSATVNISVVNVNDWDPRFRYPQYELFL 151
            G ISL++ LDYE    ++  V A D  M   ++   V + V ++ND  P F    YE  +
Sbjct: 2341 GLISLLRTLDYEQFQQHKIFVRAIDGGMPPLSSDVIVTVDVTDLNDNPPLFDQQIYEAKI 2400

Query: 152  PHIPLADLTPGSVIGKVEAADGDKG--DRVTLS-LRGPYEKMFSIN-DSGHISIVDLSAL 207
                    T G  +  V+A D D    DR+  S L G   K F IN ++G I++ +L   
Sbjct: 2401 SE----HATHGHFVMCVKAYDADSSDIDRLEYSILSGNDHKNFVINSETGIITLSNLRRH 2456

Query: 208  N 208
            N
Sbjct: 2457 N 2457


>gi|344275265|ref|XP_003409433.1| PREDICTED: LOW QUALITY PROTEIN: cadherin EGF LAG seven-pass G-type
           receptor 2-like [Loxodonta africana]
          Length = 2928

 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 68/219 (31%), Positives = 100/219 (45%), Gaps = 22/219 (10%)

Query: 25  RYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWL 81
           R ALATL +    T+  +  F + EY  S  ENL V Y +LTV     + P +  + Y L
Sbjct: 270 RSALATLTILVTDTNDHDPVFEQQEYKESLRENLEVGYEVLTVRATDGDAPPNANILYRL 329

Query: 82  SNDYG----ERFSIS-RQGDISLMQCLDYETEDSYRFTVYATDT-----LMTTSATVNIS 131
               G    E F I  R G I     +D E  +SY+ TV A+D        + +A V +S
Sbjct: 330 LEGPGGNPSEVFEIDPRSGVIRTRGPVDREEVESYQLTVEASDQGRDPGPRSATAAVFLS 389

Query: 132 VVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYE 188
           V + ND  P+F   +Y + +      D+ PG+ + +V A+D DKG    +    + G   
Sbjct: 390 VEDDNDNAPQFSEKRYVVQV----REDVAPGAPVLRVTASDRDKGSNALVHYSIMSGNAR 445

Query: 189 KMFSIN-DSGHISIVD-LSALNTSTIQLVVVATDTGNPP 225
             F ++  +G + +V  L    T    L V A D G PP
Sbjct: 446 GQFYLDAQTGALDVVSPLDYETTKEYTLRVRAQDGGRPP 484



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 50/171 (29%), Positives = 80/171 (46%), Gaps = 15/171 (8%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGERFSIS---RQGDIS 98
           F    +  + LE++P+ Y++L V     +   + R++Y L+   G  F  S     G IS
Sbjct: 506 FVSTPFQATVLESVPLGYLVLHVQAIDADAGDNARLEYRLAG-VGHDFPFSINNGTGWIS 564

Query: 99  LMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIP 155
           +   LD E  D Y F V A D     +T SA+V++++++VND +P F  P+Y + L    
Sbjct: 565 VAAELDREEVDFYSFGVEARDHGTPALTASASVSVTILDVNDNNPTFTQPEYTVRLNE-- 622

Query: 156 LADLTPGSVIGKVEAADGDKGDRVTLSL-RGPYEKMFSINDSGHISIVDLS 205
             D   G+ +  V A D D    +T  +  G     FSI       +V L+
Sbjct: 623 --DAAVGTSVVTVSAVDRDAHSVITYQITSGNTRNRFSITSQSGGGLVSLA 671



 Score = 45.1 bits (105), Expect = 0.062,   Method: Compositional matrix adjust.
 Identities = 51/189 (26%), Positives = 86/189 (45%), Gaps = 14/189 (7%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRDLR--VKYWL-SNDYGERFSISRQ---GDIS 98
           F++ EY+V   E+  V   ++TV+    RD    + Y + S +   RFSI+ Q   G +S
Sbjct: 611 FTQPEYTVRLNEDAAVGTSVVTVSAVD-RDAHSVITYQITSGNTRNRFSITSQSGGGLVS 669

Query: 99  LMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLAD 158
           L   LDY+ E  Y   V A+D     +A V ++V + N   P F+   Y + +      D
Sbjct: 670 LALPLDYKLERQYVLAVTASDGTRQDTAQVVVNVTDANTHRPVFQSSHYTVNVNE----D 725

Query: 159 LTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSINDSGHISI-VDLSALNTSTIQLV 215
              G+ +  + A D D G+  R+T  +     +     D+G ++   +L   +  +  L 
Sbjct: 726 RPAGTTVVLISATDEDTGENARITYFMEDSIPQFRIDADTGAVTTQAELDYEDQVSYTLA 785

Query: 216 VVATDTGNP 224
           + A D G P
Sbjct: 786 ITARDNGIP 794



 Score = 44.3 bits (103), Expect = 0.099,   Method: Compositional matrix adjust.
 Identities = 40/149 (26%), Positives = 69/149 (46%), Gaps = 10/149 (6%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWL-SNDYGERFSIS-RQGDISL 99
            F ++E+ V   EN P+   +  VT   P +    ++ Y +   +  E F +    G+++ 
Sbjct: 922  FEQDEFDVFVEENSPIGLAVARVTATDPDEGTNAQIMYQIVEGNIPEVFQLDIFSGELTA 981

Query: 100  MQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPH--IPLA 157
            +  LDYE    Y   + AT   + + ATV++ +++ ND  P      +E+   +     +
Sbjct: 982  LVDLDYEDRPEYILVIQATSAPLVSRATVHVRLLDRNDNPPVLG--NFEILFNNYVTNRS 1039

Query: 158  DLTPGSVIGKVEAADGDKGDRVTLSL-RG 185
               PG  IG+V A D D  D +T S  RG
Sbjct: 1040 SSFPGGAIGRVPAHDPDISDSLTYSFERG 1068


>gi|432896879|ref|XP_004076361.1| PREDICTED: protocadherin Fat 3-like [Oryzias latipes]
          Length = 4672

 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 71/234 (30%), Positives = 111/234 (47%), Gaps = 29/234 (12%)

Query: 29   ATLIVSKAGTSLRELQFSKNEYSVSALENL-PVNYVLLTVTTNKPRDL--RVKYWLSNDY 85
            A ++V   G +L    FS+  Y     EN  P + V+    T++   L  ++ Y   ND 
Sbjct: 2466 AQVVVRVLGANLYSPVFSQRFYLAEVPENSSPGSRVIQVRATDEDSGLNGQITYSFINDL 2525

Query: 86   GE-RFSISRQGDISLMQCLDYET--EDSYRFTVYATDTLMTTS-ATVNISVVNVNDWDPR 141
            G+ +F+I   G IS ++ LD E         TV A D     S  TV + + + ND  P+
Sbjct: 2526 GKSQFTIDADGVISTVEMLDRENPLNKDMVLTVMALDGGGRASFCTVRVVLADENDNAPK 2585

Query: 142  FRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSI------ 193
            FR  +Y + +     A++  GS++ +++A D D G   R+T SL    E   S+      
Sbjct: 2586 FRAVEYRMSIK----ANVAKGSLVTQIQATDPDAGSNGRITYSLYS--EARLSLVDVLEV 2639

Query: 194  -NDSGHI---SIVDLSALNTSTIQLVVVATDTGNPPRQASVPAIMHF--PEAIV 241
             +DSG +   S VD   L  + +   V ATD G+PP+ + V A +H   P+A V
Sbjct: 2640 ESDSGWMMTKSTVD--HLQGTVLSFFVKATDGGSPPKHSLVSAFIHVVPPDAYV 2691



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 60/195 (30%), Positives = 89/195 (45%), Gaps = 18/195 (9%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWLSNDYGERFSI-SRQGDISLM 100
            FS   Y  S  EN     +L  +    P +     V Y L + +   FSI S  G + L 
Sbjct: 3131 FSSTHYLASVYENAAPKALLTRLQATDPDEGLNRTVVYSLVDSFNGFFSIDSLSGVVILE 3190

Query: 101  QCLDYETEDSYRFTVYATDTL-----MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIP 155
            + LD E+++SYR    ATD +     M++   + I V++VND  P F+   Y + +P   
Sbjct: 3191 KSLDRESQESYRIRAQATDRVGQQGAMSSQVDLTILVLDVNDNAPVFQKRDYAVTIPE-- 3248

Query: 156  LADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYE-KMFSINDS-GHISIV-DLSALNTS 210
              D+  G+ + +V A   D G    +T ++R   E   F IN   G IS+  DL      
Sbjct: 3249 --DVAVGTEVLRVLATSADIGPNAEITYTIRSGNELGKFIINRKLGSISVADDLDFEVCK 3306

Query: 211  TIQLVVVATDTGNPP 225
               + V A D+GNPP
Sbjct: 3307 DYYITVEAWDSGNPP 3321



 Score = 46.2 bits (108), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 71/232 (30%), Positives = 101/232 (43%), Gaps = 27/232 (11%)

Query: 27   ALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLR--VKYWLSND 84
            ++A++IV        +L F    +S S  EN+  N  L+T+       L   +KY L N 
Sbjct: 1950 SIASVIVFVKDAMDSDLFFPVPVFSGSISENVS-NVTLVTIVNTIGHRLNEPLKYTLLNP 2008

Query: 85   YGERFSISRQGDISLMQC--LDYETEDSYRFTVYAT---DTLMTTSATVNISVVNVNDWD 139
             G RF+I       L      D E  +SY   V  +   + L     TV + V +VND  
Sbjct: 2009 -GGRFAIRPTCGAVLTTGVPFDREENESYELVVEVSREDEVLKVARVTVQVQVEDVNDNV 2067

Query: 140  PRFRYPQYELFLPHIPLA--DLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIND 195
            P F      + LP+      +  PGSVI +V A D D G    VT SL+   ++ F IN 
Sbjct: 2068 PEF------VNLPYYAAVQVEAVPGSVIFRVSAVDRDYGPNGEVTYSLK-MQQRNFEINP 2120

Query: 196  -SGHISIVDLSALNTSTIQ--LVVVATDTGNPPRQASVPAIMHFPEAIVQQA 244
             +G + +      N S  +  L VVATD G P   + VP     P  +V +A
Sbjct: 2121 VTGELILKRAFGANLSNTEYKLTVVATDGGFPRLSSEVP----LPVTVVNKA 2168



 Score = 44.3 bits (103), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 56/194 (28%), Positives = 90/194 (46%), Gaps = 19/194 (9%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPR---DLRVKYWL--SNDYGERFSISRQ-GDIS 98
            F K +Y+V+  E++ V   +L V         +  + Y +   N+ G +F I+R+ G IS
Sbjct: 3237 FQKRDYAVTIPEDVAVGTEVLRVLATSADIGPNAEITYTIRSGNELG-KFIINRKLGSIS 3295

Query: 99   LMQCLDYETEDSYRFTVYATDTL---MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIP 155
            +   LD+E    Y  TV A D+    ++T+  V I +++VND  P F    Y + +    
Sbjct: 3296 VADDLDFEVCKDYYITVEAWDSGNPPLSTATMVVIELMDVNDNAPTFDQDVYNVLISE-- 3353

Query: 156  LADLTPGSVIGKVEAADGDK--GDRVTLS-LRGPYEKMFSINDSGHISIVD--LSALNTS 210
              D + G  + +V A D D     R+T S L+G     F I+    +  V+  L     S
Sbjct: 3354 --DASVGQTVTRVSAEDLDSQVNGRITYSILKGDRSNHFWIDPVTGLLKVNKKLDRELVS 3411

Query: 211  TIQLVVVATDTGNP 224
               L V A D+G+P
Sbjct: 3412 MYTLSVQAFDSGSP 3425



 Score = 42.4 bits (98), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 57/215 (26%), Positives = 96/215 (44%), Gaps = 20/215 (9%)

Query: 26   YALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLS 82
            + L T+I+  A  +  + +F ++ YS    EN  +   ++T+T    +  ++ ++ + + 
Sbjct: 797  WRLLTVIIEDANDN--DPRFYQDNYSAVVAENSAIGSEVITITAFDKDMGQNGQLSFIML 854

Query: 83   NDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATD-----TLMTTSATVNISVVNVN 136
             +    F I S  G + +   LD ET  ++   +   D     T  ++  T++I V +VN
Sbjct: 855  TNI-PHFGIDSITGTVFVASTLDRETFPTFVLKIEVKDKAEKGTRRSSVTTLSIIVEDVN 913

Query: 137  DWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGD--KGDRVTLSLRGPYEKMFSIN 194
            D  P F    Y   +P     DL  G+VI  V+A D D   G +V  SL   +   F IN
Sbjct: 914  DCSPAFIPSSYSARVPE----DLPSGTVITWVQAQDPDIGPGGQVQYSLINDFNGTFEIN 969

Query: 195  D-SGHISI-VDLSALNTSTIQLVVVATDTGNPPRQ 227
              SG + I  +L         L ++A D G P  Q
Sbjct: 970  SVSGILRIRKELDFETKQFFNLTILAEDRGTPRLQ 1004



 Score = 41.6 bits (96), Expect = 0.60,   Method: Compositional matrix adjust.
 Identities = 35/142 (24%), Positives = 66/142 (46%), Gaps = 8/142 (5%)

Query: 82   SNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDW 138
            S + G  F++ + G +   +    E    +   + A+D+    +T+S+ V++ V+  + +
Sbjct: 3489 SGNEGSYFALDQTGTLKANRLFGPEAPREFTLEIQASDSGRPSLTSSSWVSLRVMGNSQY 3548

Query: 139  DPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSGH 198
             P       E+F+  + L D  PG  +G++ AAD D  D +  + +   + MF IN    
Sbjct: 3549 KPTVS--PLEIFI--VMLTDTFPGGTVGQIYAADRDPSDVLLFTQKPLPKSMFRINRQDG 3604

Query: 199  ISIVDLSALNTSTIQLVVVATD 220
             SIV L+ L     Q+    +D
Sbjct: 3605 -SIVALAGLEPGRYQMNATVSD 3625



 Score = 40.0 bits (92), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 35/110 (31%), Positives = 55/110 (50%), Gaps = 11/110 (10%)

Query: 81   LSNDYGERFSISRQ-GDISLMQCLDYETEDSYRFTVYATD----TLMTTSATVNISVVNV 135
            L ++ GE F + ++ G I L++ LDYE  + YRF V A      T   T+  V + +++V
Sbjct: 2734 LDSNQGETFMVEKETGLIRLLKPLDYEDVNIYRFKVAAMTRRDLTESVTTVDVEVKILDV 2793

Query: 136  NDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGD--RVTLSL 183
            ND  P F    Y   +    +  +  G+ + +V A D D G   +VT SL
Sbjct: 2794 NDNQPVFETNAYVATV----MEGMPAGTRVIQVRALDPDWGSNGQVTYSL 2839



 Score = 40.0 bits (92), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 30/96 (31%), Positives = 52/96 (54%), Gaps = 9/96 (9%)

Query: 56  ENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGERFSISRQ-GDISLMQCLDYET-EDS 110
           E+LPV  V+L V+    +K  +  + Y ++ D    F+I +  G++ + + LD+E+ +D+
Sbjct: 467 ESLPVGTVVLVVSAVDDDKGENGYITYTINGDQSLPFAIQQHTGELRITRDLDFESSKDT 526

Query: 111 YRFTVYATDT----LMTTSATVNISVVNVNDWDPRF 142
           Y F V A+D        +   V I V+N+ND  P F
Sbjct: 527 YTFAVRASDWGSPYRRESELNVTIRVININDNPPLF 562



 Score = 39.3 bits (90), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 67/262 (25%), Positives = 105/262 (40%), Gaps = 19/262 (7%)

Query: 12   TLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNK 71
            TL VR          A A + +S   +   + +F + EY    +EN      + TVT   
Sbjct: 1620 TLTVRVTDNGFPPLSATALVRISLMLSDFSKPKFFQKEYQAEVMENSNSGTHVTTVTALS 1679

Query: 72   PRDLRVKYWLSNDYGER-FSISRQ-GDISLMQCLDYETEDSYRFTVYATDTL-MTTSATV 128
               L       N+  ER FSI++  G I+  + LD+E   SY   V A     +  SA V
Sbjct: 1680 RSPLIFDITRGNE--ERSFSINQHTGVITTRKMLDFELTASYFLMVRALSMAGVEASAAV 1737

Query: 129  NISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGK------VEAADGDKGDRVTLS 182
             + V ++ND  P     +Y      +  A L    V+G+      ++A D D+     L 
Sbjct: 1738 IVQVGDINDNPPELLQIRYA---GRVSEAALVNSVVLGEDGNPLVIQATDKDRNHNAMLV 1794

Query: 183  LRGPYE--KMFSINDSGHISIVDLSALNTSTIQ---LVVVATDTGNPPRQASVPAIMHFP 237
             +   E  +MF   DSG  SI  ++ L+  T       V   D+G P   A  PA +   
Sbjct: 1795 FQIIDETARMFFSVDSGTGSIRTIANLDYETFSEFLFRVQVQDSGEPSLCADSPAEVFIK 1854

Query: 238  EAIVQQASSKLNSGTSSTVLII 259
               +  +  K +     T+L++
Sbjct: 1855 VININDSPPKFSQEMYETILLL 1876



 Score = 38.5 bits (88), Expect = 6.0,   Method: Compositional matrix adjust.
 Identities = 58/200 (29%), Positives = 84/200 (42%), Gaps = 18/200 (9%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGER--FSIS-RQGDIS 98
            FS+  Y V+  E+ P +  LL V     ++   L    + S D G    F +S   G I 
Sbjct: 1442 FSQPTYDVTVSEDAPADMELLRVRATDIDERARLSFSMYASVDPGSMRLFRVSPGTGVIY 1501

Query: 99   LMQCLDYETEDSYRFTVYATDTLMTTS---ATVNISVVNVNDWDPRFRYPQYELFLPHIP 155
                LDYE    +  TV   D     +   A + ++V ++ND  P F    Y+  +    
Sbjct: 1502 TADRLDYEARTQHILTVMVKDQEFPFNRDLARIVVAVEDINDNVPFFTRTTYDAVVYETS 1561

Query: 156  LADLTPGSVIGKVEAADGDKG--DRVTLSLR-GPYEKMFSI-NDSGHISIV-DLSALNTS 210
             A    G  + +V A D D G   ++T S+  G    +F I N +G ISI  DL   +  
Sbjct: 1562 PA----GYSVLQVTALDKDSGINGQLTYSIEAGNTRGVFIIDNATGRISIAKDLDITSVG 1617

Query: 211  TIQLVVVATDTGNPPRQASV 230
               L V  TD G PP  A+ 
Sbjct: 1618 FYTLTVRVTDNGFPPLSATA 1637



 Score = 38.1 bits (87), Expect = 6.5,   Method: Compositional matrix adjust.
 Identities = 43/153 (28%), Positives = 69/153 (45%), Gaps = 24/153 (15%)

Query: 43  LQFSKNEYSVSALENLPV-----NYVLLTVTTNKPRDLRVKYWLSNDYGERFSISRQ--- 94
           L F++  Y+ S  EN        + V + +T   P  L VKY + +   E    + +   
Sbjct: 26  LLFTQPAYNASVFENSAARTYITSEVKMGITVGLPWYLDVKYSIESGDSESIFQAEEFVV 85

Query: 95  GDISLMQ-C--------LDYETEDSYRFTVYAT-DTLMTTSATVNISVVNVNDWDPRFRY 144
           GD   ++ C        L+ E +D+Y  TV A+    +    TV I V++ ND  P F  
Sbjct: 86  GDFCFLRICTNGGSGATLNREVQDNYTLTVKASAQGGLEALVTVFIKVLDTNDLRPLFS- 144

Query: 145 PQYELFLPHIPLADLTP-GSVIGKVEAADGDKG 176
           P +  F+    +++  P G+ IG+V A D D G
Sbjct: 145 PTFYSFV----VSESAPLGTTIGRVTATDADVG 173



 Score = 38.1 bits (87), Expect = 6.9,   Method: Compositional matrix adjust.
 Identities = 59/190 (31%), Positives = 85/190 (44%), Gaps = 28/190 (14%)

Query: 73   RDLRVKYWLSNDYG-ERFSISRQ-GDISLMQCLDYETEDSYRFTVYATD---TLMTTSAT 127
            RD  ++Y +    G   F+I    G I     LD ET+DSY  TV ATD   T ++ S  
Sbjct: 1056 RDGTLRYSIRGGSGLGTFTIDEDTGMIYTAGILDCETKDSYWLTVVATDRGATPLSASVE 1115

Query: 128  VNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSV-IGKVEAADGDKGDRVT-LSLR- 184
            V I + +VND  P    P Y     H  + + +P  V + +++A D D   + + LS R 
Sbjct: 1116 VFIEIEDVNDNAPLTSDPIY-----HPVIMENSPKDVSVIQIQAQDPDLSTKPSRLSYRI 1170

Query: 185  --GPYEKMFSIN-DSGHISIV--DLSALNTSTIQLVVVATDTGNPPRQASVPAIMH---- 235
              G  +  FSIN  +G I+     L     +   L V   D+    RQ++V  I+H    
Sbjct: 1171 TAGNPQNFFSINPRTGLITTTARKLDREQQAEHFLEVTVIDSPVTTRQSTVWVIVHIEDE 1230

Query: 236  ------FPEA 239
                  FPEA
Sbjct: 1231 NDNRPTFPEA 1240



 Score = 37.7 bits (86), Expect = 8.8,   Method: Compositional matrix adjust.
 Identities = 37/144 (25%), Positives = 65/144 (45%), Gaps = 10/144 (6%)

Query: 43   LQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLS--NDYGERFSISRQ-GDISL 99
            L F++  Y+ S  E+  V   +  V  ++   L    W +   ++  +F +    G + +
Sbjct: 1343 LLFTQRHYNFSVPESTAVAQPVGVVAVSQ---LNTPVWFNIIGNFDMQFDLQVGVGTLVV 1399

Query: 100  MQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADL 159
             + LD E +  Y  TV  TD     +A V I V + ND  P F  P Y++ +     AD+
Sbjct: 1400 AKPLDAEVQSVYNMTVQVTDGTSFATAQVFIRVQDSNDNPPVFSQPTYDVTVSEDAPADM 1459

Query: 160  TPGSVIGKVEAADGDKGDRVTLSL 183
                 + +V A D D+  R++ S+
Sbjct: 1460 E----LLRVRATDIDERARLSFSM 1479


>gi|449496511|ref|XP_002196710.2| PREDICTED: protocadherin Fat 4-like [Taeniopygia guttata]
          Length = 2518

 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 52/164 (31%), Positives = 82/164 (50%), Gaps = 16/164 (9%)

Query: 75   LRVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDTLM---TTSATVNIS 131
            ++V Y L + + ++FSI  QGDI  +  LD E  D Y   V A D+L+   T  A V + 
Sbjct: 1117 VQVGYSLKSHW-DKFSIGDQGDIVALVWLDREEGDLYSILVEAVDSLVPPNTAVALVTVR 1175

Query: 132  VVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDR--VTLSLRGPYEK 189
            V ++ND  P F          H+   +   G  +G   A D D GD   ++ SL+  + +
Sbjct: 1176 VEDINDNPPVFS----AWIQTHLSAPENAAGLDLGTFSATDLDAGDNALISYSLQDDFAE 1231

Query: 190  MFSINDS-GHISI---VDLSALNTSTIQLVVVATDTGNPPRQAS 229
             F IN S G +     +D   ++  + +L ++ATD+G PP+ AS
Sbjct: 1232 TFHINSSTGKLMTKKPLDREVMD--SYELKIIATDSGKPPQSAS 1273



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/170 (29%), Positives = 82/170 (48%), Gaps = 14/170 (8%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTTN----KPRDLRVKYWLSNDYGERFSISRQGDISL 99
           +F +  YS S  E   +N  ++ V        P    + Y L     + FSI R+GD ++
Sbjct: 114 EFQQANYSASVSEVAGINSTVIKVEAEDKDFSPEFSILTYSLWGPNSDYFSI-REGDGNI 172

Query: 100 M--QCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLA 157
           M  + LDY   + +  TV A +     SAT ++ ++NV D+D    Y    ++  +I   
Sbjct: 173 MVKKPLDYNEVNFFNLTVQAKEKFGNQSATASL-IINVEDYDTLNPYFSQSVYHGNISEN 231

Query: 158 DLTPGSVIGKVEAADGDKG--DRVTLSLR----GPYEKMFSINDSGHISI 201
            + P S + KV A DGDKG  +++  S++      Y   FSIND+G + +
Sbjct: 232 QVGPLSTVPKVLAQDGDKGINEKIIYSIKLVNPPAYNNSFSINDAGVLEV 281



 Score = 55.5 bits (132), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 52/174 (29%), Positives = 82/174 (47%), Gaps = 23/174 (13%)

Query: 44   QFSKNEYSVSALE-----NLPVNYVLLTVTT-NKPRDLRVKYWLSNDYGER-FSISRQGD 96
            +F    YS  ALE     N P     +T T  ++  + R+ Y+LS + G+  +SI + G 
Sbjct: 872  EFQNQPYSFQALEGEYMLNNPSRVGHVTATDLDEGENARITYYLSAEDGDNPYSIQQDGT 931

Query: 97   ISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
            I +   +D E++D Y   + A+D    L      ++I V++VND  P+F   QY      
Sbjct: 932  ILVTGSVDRESKDKYELLLVASDNGVPLRQNFTHISIQVLDVNDNPPQFTRAQYSA---S 988

Query: 154  IPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKM-----FSIND-SGHISI 201
            +P+A    G  +  V A D D G+   +S    Y  M     F IN+ +G IS+
Sbjct: 989  VPVAAAKEGEFVLAVSATDLDLGNNAVIS----YSFMNHSDDFHINNGTGEISL 1038



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 61/226 (26%), Positives = 102/226 (45%), Gaps = 20/226 (8%)

Query: 44  QFSKNEYSVSALENL--PVNYVLLTVTTNKPRDLRVKYWLSNDYGERFSISRQGDISLMQ 101
           QF +  Y+VS  E L  PV    +      P  + V++ +  +    F+I  +G IS  +
Sbjct: 482 QFIQKTYNVSVKEELVPPVEVAQVEYKALNPH-IPVEFRVLTESA-LFAIDGKGVISTKK 539

Query: 102 CLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTP 161
            LDYE++ +Y   +  +D      A V I V +VND  P F           I +A+  P
Sbjct: 540 KLDYESQKNYTLNISLSDGSTADYAMVFIRVTDVNDNSPVFGTTSTT-----IAIAENMP 594

Query: 162 -GSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDSGHISIVDLSALNTSTIQLVVVA 218
            G+ +  V A D D+G    V  SL+G  E    I+ SG I +     + ++ + L ++ 
Sbjct: 595 VGTNVTGVSATDMDEGFNGLVVYSLKGG-EGTMDIDSSGFIFLEQGQPMRSTALNLTIII 653

Query: 219 TDTG-NPP------RQASVPAIMHFPEAIVQQASSKLNSGTSSTVL 257
            D   NPP       +  VP       A++  A++ L++G ++ V+
Sbjct: 654 DDVNDNPPVFSSSRYEVKVPEDQELGSALLTLAATDLDAGANAFVM 699



 Score = 47.8 bits (112), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 58/201 (28%), Positives = 92/201 (45%), Gaps = 23/201 (11%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDY---GERFSI---SRQGDIS 98
            F +  YSV+  EN P + +L  V T    D  + Y     Y   GE  S       GDI+
Sbjct: 1290 FPQKSYSVTVRENEPPHVILSAVAT----DADIGYNAIIHYTITGETISFHVGEFSGDIA 1345

Query: 99   LMQCLDYETEDSYRFTVYA---TDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIP 155
             +Q LDYE++  Y   + A    +  +  +A + ++V +VN+  P F    Y   L    
Sbjct: 1346 TLQPLDYESQSQYMLILKAFNPGEPHLQDTANITVTVEDVNEEGPVFDQSSYYKVLLDSS 1405

Query: 156  LADLTPGSVIGKVEAADGDKG--DRVTLSLRGP-YEKMFSINDS-GHISIV-DLSALNTS 210
            +A    G+++  + A D  KG  + +  ++ G   E +FS++ + G + +  DLS     
Sbjct: 1406 IA----GTLVVDINARDEGKGYDEGIFYNISGGNSEGLFSLSSTTGELRLTRDLSKQTVP 1461

Query: 211  TI-QLVVVATDTGNPPRQASV 230
                L V ATD+G PP   SV
Sbjct: 1462 LYYSLNVTATDSGLPPLSTSV 1482



 Score = 44.7 bits (104), Expect = 0.073,   Method: Compositional matrix adjust.
 Identities = 39/131 (29%), Positives = 64/131 (48%), Gaps = 15/131 (11%)

Query: 73   RDLRVKYWLSNDYGERFSISRQ-GDISLMQCLDYETEDS-YRFTVYATDTLMTTS----A 126
            R+  + Y + N +  +F I+   G +      DYE E + Y+  VYA D  +        
Sbjct: 1628 RNGFLTYGILNGHRLKFRINETTGILYSTAPFDYEEEPTEYQVVVYAEDDGIPEKKRGYC 1687

Query: 127  TVNISVVNVNDWDPRFR-YPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDR--VTLSL 183
            TV I + ++NDW P F   P + +   ++P+     G ++GK+ A+D D GD   V  +L
Sbjct: 1688 TVVIKITDINDWPPVFDPVPDFSVH-ENVPV-----GFIVGKITASDRDTGDNAFVLYNL 1741

Query: 184  RGPYEKMFSIN 194
             G  E +F I+
Sbjct: 1742 TGEGENVFEID 1752



 Score = 44.3 bits (103), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 72/148 (48%), Gaps = 10/148 (6%)

Query: 89  FSISRQGDISLMQC--LDYETEDSYRFTVYATDTL---MTTSATVNISVVNVNDWDPRFR 143
           F++   G +SL     LD ET   +   V+A D +   + +SA  +I+V++VND +P F+
Sbjct: 815 FTVDIPGTLSLRNDTELDRETTSGFTLQVWAVDNVINGLNSSALFHITVLDVNDNNPEFQ 874

Query: 144 YPQYELFLPHIPLADLTPGSVIGKVEAADGDKGD--RVTLSLRGP-YEKMFSINDSGHIS 200
              Y  F        L   S +G V A D D+G+  R+T  L     +  +SI   G I 
Sbjct: 875 NQPYS-FQALEGEYMLNNPSRVGHVTATDLDEGENARITYYLSAEDGDNPYSIQQDGTIL 933

Query: 201 IV-DLSALNTSTIQLVVVATDTGNPPRQ 227
           +   +   +    +L++VA+D G P RQ
Sbjct: 934 VTGSVDRESKDKYELLLVASDNGVPLRQ 961



 Score = 43.1 bits (100), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 50/99 (50%), Gaps = 9/99 (9%)

Query: 77   VKYWLSNDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISV 132
            + Y L +D+ E F I S  G +   + LD E  DSY   + ATD+     + S+ ++I+V
Sbjct: 1221 ISYSLQDDFAETFHINSSTGKLMTKKPLDREVMDSYELKIIATDSGKPPQSASSVLSITV 1280

Query: 133  VNVNDWDPRFRYPQYELFL-----PHIPLADLTPGSVIG 166
             +VND  P F    Y + +     PH+ L+ +   + IG
Sbjct: 1281 EDVNDNPPVFPQKSYSVTVRENEPPHVILSAVATDADIG 1319



 Score = 38.9 bits (89), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 34/118 (28%), Positives = 54/118 (45%), Gaps = 11/118 (9%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGERFSI-----SRQGD 96
           FS + Y V   E+  +   LLT+     +   +  V Y +++   +  S      S  G 
Sbjct: 663 FSSSRYEVKVPEDQELGSALLTLAATDLDAGANAFVMYRITDQRPQTSSPVFLVNSSTGQ 722

Query: 97  ISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFL 151
            SL Q LDYET + +   V A+D     ++T   V + V +VND  P F    Y++F+
Sbjct: 723 FSLSQQLDYETINKFEVQVEASDGGQPSLSTETLVVVCVEDVNDNPPEFSQAAYDVFV 780



 Score = 38.5 bits (88), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 55/199 (27%), Positives = 84/199 (42%), Gaps = 29/199 (14%)

Query: 44   QFSKNEYSVSALENLPVNYVL----LTVTTNKPRDLRVKYWLSNDYGERFSISRQGDISL 99
            + +K+E S+S LEN  V+Y++    +  T+ KP D  V     N+ G        G++  
Sbjct: 1911 RLNKSEISISVLENTGVDYLIYDFAVVETSGKPIDYTVVS--GNERGHFRLDPESGELRT 1968

Query: 100  MQCLDYETEDSYRFTVYATDTLMTT------------SATVNISVVNVNDWDPRFRYPQY 147
               LDYE    Y   + A   + +             +A + ISV +VN+ +P F    Y
Sbjct: 1969 AVNLDYEEVSQYVILIQANKRVSSAAEFQRSGLFAENAAMLTISVQDVNE-EPVFSSHSY 2027

Query: 148  ELFLP-HIPLADLTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSIND-SGHISIVD 203
               +P  +P         +  V+A D D GD  R+  SL       F IN+ +G I  V 
Sbjct: 2028 SARIPSSVPYK-----YPVITVQATDPDSGDNGRLLYSLVRGQTSEFDINENTGQIFTVS 2082

Query: 204  LSALNTSTIQLVVVATDTG 222
            ++     T  L V A D G
Sbjct: 2083 VAG-KAGTFYLEVQAADQG 2100


>gi|327273774|ref|XP_003221655.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 1-like [Anolis
            carolinensis]
          Length = 4585

 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 63/218 (28%), Positives = 106/218 (48%), Gaps = 20/218 (9%)

Query: 29   ATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDL----RVKYWLSND 84
            A ++++  G +L    FS+ EY V   EN P+ + L+T      +D      V Y + ND
Sbjct: 2477 AQVLINVIGANLHSPLFSQKEYEVELSENAPL-HTLVTEVRATDKDTGHYGAVTYHIVND 2535

Query: 85   YGE-RFSISRQGDISLMQCLDYET--EDSYRFTVYATDTLMTTS-ATVNISVVNVNDWDP 140
            + + RF  + +G I   + LD ET  E      + A D+    +  +VN+ + +VND  P
Sbjct: 2536 FAQDRFYTNERGQIFTSEKLDRETPAEKVIFIRLMAKDSGGKVAFCSVNVILTDVNDNAP 2595

Query: 141  RFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRV----TLSLRGP-YEKMFSIND 195
             FR  +YE+ +     +D+  G+ + KV A+D D+G       T+    P  ++   IN 
Sbjct: 2596 LFRATEYEVNIS----SDVPRGTSVIKVLASDADEGTNADITYTMEADSPSVQENLEINH 2651

Query: 196  -SGHISIVD-LSALNTSTIQLVVVATDTGNPPRQASVP 231
             +G I+  + L  L    +   V ATD G+P +++ VP
Sbjct: 2652 LTGVITTKESLIGLENEFLAFFVRATDGGSPQKESRVP 2689



 Score = 62.0 bits (149), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 47/201 (23%), Positives = 89/201 (44%), Gaps = 30/201 (14%)

Query: 7    FLQPITLVVRAIQYDNQDRYALATL-------------------IVSKAGTSLRELQFSK 47
            F+ PIT +V + +Y     Y + T+                    + K   +   + F +
Sbjct: 1302 FIDPITGIVSSKKYSGAGEYDILTIKAVDNGRPQKSSTARLHIEWIPKPSPTSEPISFEE 1361

Query: 48   NEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYG---ERFSISR-QGDISLMQCL 103
            + +S + +E+ PV +++  +    P    +  W     G    RF + +  G I + + L
Sbjct: 1362 SFFSFTVMESDPVTHMIGVIAVEPPS---IPLWFEITGGNSDSRFDVDKGTGTIVVAKPL 1418

Query: 104  DYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGS 163
            D E + +Y  TV ATD   T    V I V++ ND  P F   +Y++ +P     D  P +
Sbjct: 1419 DAEQKSNYNLTVEATDGTRTIGTQVYIKVIDTNDHRPEFSTSEYQVIIPE----DTMPET 1474

Query: 164  VIGKVEAADGDKGDRVTLSLR 184
             I +V A+D D+ +++  +++
Sbjct: 1475 EILQVSASDKDEKNKLIYTMQ 1495



 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 59/201 (29%), Positives = 94/201 (46%), Gaps = 23/201 (11%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSN-DYGERFSIS-RQGDISLMQC 102
            F K  YS    EN+ ++  ++ V  N P  LRV Y +++ D   +F+I+   G I+    
Sbjct: 2183 FEKAFYSAEIPENIQIHSPVVHVQANSPEGLRVFYSITDGDPFSQFTINFNTGVINTFAP 2242

Query: 103  LDYETEDSYRFTVYATDTLMTTSATVNISVV--NVNDWDPRFRYPQYELFLPHIPLADLT 160
            LD+E+  +Y+ ++ ATD+L    A V + +V  ++ND  P        LF      A L+
Sbjct: 2243 LDFESHPAYKLSIRATDSLTGAHAEVFVDIVIEDINDNPP--------LFTEQFYTATLS 2294

Query: 161  PGSVIG----KVEAADGDKGDRVTLSLR-----GPYEKMFSINDSGHISIVDLSALNTST 211
              +VIG    +V A D D G    +S           + F I+ S  I ++  S     +
Sbjct: 2295 EAAVIGTSVVRVWATDADSGTNRGISYHLVENNSNSHEYFHIDSSTGIILISRSLDYEQS 2354

Query: 212  IQ--LVVVATDTGNPPRQASV 230
             Q  L+V A D+G PP  + V
Sbjct: 2355 RQHTLLVRAIDSGMPPLSSDV 2375



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 67/236 (28%), Positives = 105/236 (44%), Gaps = 19/236 (8%)

Query: 5    DDFLQPI-TLVVRAIQYDNQDRYA-LATLIVSKAGTSLRELQFSKNEYSVSALENLPVNY 62
            D  LQP+ +L ++    D+  R +    L+VS    +     F   EYS +  E+     
Sbjct: 3187 DRELQPVYSLTLKGKMKDSPRRLSSTGILVVSVLDINDNPPVFEYREYSATVSEDAVAGI 3246

Query: 63   VLLTVTTNKPRDLRVKYWLS------NDYGERFSI-SRQGDISLMQCLDYETEDSYRFTV 115
             +L V     RD+     ++      N++G +FSI S+ G I ++  LDYE+   Y  TV
Sbjct: 3247 EILQVYA-ASRDIEANAEITYSIISGNEHG-KFSIDSKTGAIFIIGGLDYESSPEYYLTV 3304

Query: 116  YATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAAD 172
             ATD     ++   TVNI+V ++ND  P F    Y   +     A++    V      +D
Sbjct: 3305 EATDGGTPSLSDVVTVNINVTDINDNTPVFSQDTYTAVISED--AEVEQSVVTVMAADSD 3362

Query: 173  GDKGDRVTLS-LRGPYEKMFSINDS-GHISIVD-LSALNTSTIQLVVVATDTGNPP 225
            G     +  S + G  E  F+I+ + G + +   L     S   L V A+D GNPP
Sbjct: 3363 GPLNSHIRYSIIDGNQENQFTIDPTLGEVKVAKLLDREKISGYTLTVQASDNGNPP 3418



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 58/236 (24%), Positives = 108/236 (45%), Gaps = 24/236 (10%)

Query: 4    EDDFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYV 63
            E++FL      VRA    +  + +   L V      +   +FS+  YS +  E++P+   
Sbjct: 2666 ENEFL---AFFVRATDGGSPQKESRVPLYVRILSPEIHIPKFSEPFYSYTLSEDIPIGTE 2722

Query: 64   LLTVTTNKPRDLRVKYWLSN----DYGERFSISRQ-GDISLMQCLDYETEDSYRFTVYA- 117
            + T+     + L       N    +  E F I RQ G + L + LD+ET   Y+F+V A 
Sbjct: 2723 IDTIRAEHTQTLLYTLVKGNTPESNRDEYFVIDRQNGKLKLEKSLDHETTKWYQFSVLAY 2782

Query: 118  ---TDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGD 174
                D  + +S  ++I + +VND  P      Y+ F+    + ++  G+ + +++A D D
Sbjct: 2783 YVNEDYKVVSSVDISIQIRDVNDNKPVIESNPYKAFI----VENMPAGTRVIQIKATDQD 2838

Query: 175  KGDRVTLSLR------GPYEKMFSIN-DSGHISIV-DLSALNTSTIQLVVVATDTG 222
             G    ++ R          + F+IN ++G I+ + +L     +  ++ VVA+D G
Sbjct: 2839 SGSNGQVTYRLYPAQDADISESFAINAETGWITTLKELDHEKQNKYKITVVASDRG 2894



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 40/145 (27%), Positives = 70/145 (48%), Gaps = 8/145 (5%)

Query: 90   SISRQGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYEL 149
            +I  +  + + + LD E +D+Y   + ATD +  T A V + V++ ND  P      Y  
Sbjct: 2972 NIQNEWKVYVRKPLDREVKDNYLLNITATDGMFATKAVVEVKVLDSNDNSPVCEKMLYTE 3031

Query: 150  FLPHIPLADLTPGSVIGKVEAADGD--KGDRVTLSLRGPYEKMFSIN-DSGHI-SIVDLS 205
             +P     D  PG +I ++ A D D      +T +L+G   + FS++ D+G + ++  L 
Sbjct: 3032 TIPE----DAPPGKLIMQILATDADIRSNAEITYTLQGAGAEDFSLSPDTGELKTLAALD 3087

Query: 206  ALNTSTIQLVVVATDTGNPPRQASV 230
                S    +V A+D G    QA++
Sbjct: 3088 REQKSVYTFMVKASDGGGRFCQANI 3112



 Score = 48.1 bits (113), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 47/175 (26%), Positives = 86/175 (49%), Gaps = 24/175 (13%)

Query: 20   YDNQDRYALATLIVSKAGTSLRELQFSK-----NEYSVSALENLPVNYVLLTVTT---NK 71
            Y N+D   ++++ +S     +R++  +K     N Y    +EN+P    ++ +     + 
Sbjct: 2783 YVNEDYKVVSSVDIS---IQIRDVNDNKPVIESNPYKAFIVENMPAGTRVIQIKATDQDS 2839

Query: 72   PRDLRVKYWL----SNDYGERFSISRQ-GDISLMQCLDYETEDSYRFTVYATD----TLM 122
              + +V Y L      D  E F+I+ + G I+ ++ LD+E ++ Y+ TV A+D      +
Sbjct: 2840 GSNGQVTYRLYPAQDADISESFAINAETGWITTLKELDHEKQNKYKITVVASDRGEKVQL 2899

Query: 123  TTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGD 177
            T++A V +SV +VND  PRF     E++   +   D T G V+  +   D D  D
Sbjct: 2900 TSTAVVEVSVTDVNDNPPRF---TAEIYKGTVSEDDPT-GGVVAILSTTDADSED 2950



 Score = 42.0 bits (97), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 55/197 (27%), Positives = 87/197 (44%), Gaps = 26/197 (13%)

Query: 45   FSKNEYSVSALENLPVNYVLLT--------VTTNKPRD---LRVKYWLSNDYGERFSI-S 92
            F + EY+    E+   N V+LT          T+  +D   L V   +     + F+I S
Sbjct: 1766 FMQTEYTGHISESASANSVVLTDRHVPLVIRATDADKDSNALLVYQIVEPSVHKYFTIDS 1825

Query: 93   RQGDISLMQCLDYETEDSYRFTVYATDT-----LMTTSATVNISVVNVNDWDPRFRYPQY 147
              G I  +  LDYE  +++RF+V  +D          +A V I V+++ND  P F    Y
Sbjct: 1826 STGAIRTVMSLDYEERNTFRFSVQVSDMGTPRLFAEYAANVTIRVIDINDCPPVFSKDLY 1885

Query: 148  ELFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSL-RGPYEKMFSIND-SGHISIVD 203
            E  +    L     G  +  V A D D     R+  S+  G   + FSI+  +G I++ +
Sbjct: 1886 EATV----LVPTYKGVKVVMVNATDADSETFSRLMYSITEGNIGEKFSIDSKTGQITVQN 1941

Query: 204  LSALNTSTIQLVVVATD 220
             + L  S  +L V A+D
Sbjct: 1942 TTQLR-SRYELTVRASD 1957



 Score = 41.2 bits (95), Expect = 0.87,   Method: Compositional matrix adjust.
 Identities = 48/163 (29%), Positives = 73/163 (44%), Gaps = 17/163 (10%)

Query: 45   FSKNEYSVSALENLPVNYVL--LTVTT-----NKPRDLRVKYWLSNDYGERFSISRQGDI 97
            FSK  YS+   EN PV + +  L VT      N P         + DY   F I++QG++
Sbjct: 3439 FSKGNYSIIIQENKPVGFNIQQLEVTDKDSSHNGPPFFFTIVSGNEDYA--FEINQQGEL 3496

Query: 98   SLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHI 154
            +    L  + +D Y   +   D     +++ A V+I V+  +   P       E+F+   
Sbjct: 3497 TTAIHLKRKVKDHYFLHLKVADNGRPQLSSLAYVDIRVIEESIHPPAIL--PLEIFI--T 3552

Query: 155  PLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSG 197
                   G VIGKV A D D  D +T SL    E +FS++ +G
Sbjct: 3553 AFGGEYSGGVIGKVHATDQDVYDTLTYSLDSK-ESVFSVSGTG 3594



 Score = 38.1 bits (87), Expect = 7.8,   Method: Compositional matrix adjust.
 Identities = 56/215 (26%), Positives = 89/215 (41%), Gaps = 19/215 (8%)

Query: 24  DRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYW 80
           DR A   +++     +    +F++  Y  S  EN+P+   ++ V     ++  +  V Y 
Sbjct: 443 DRKASTRVLIEVIDVNTHSPEFTQMSYKASFDENVPIGTSVMRVNAKDLDEGENGYVTYS 502

Query: 81  LSNDYGERFSISR-QGDISLMQCLDYE-TEDSYRFTVYATD----TLMTTSATVNISVVN 134
           ++N     F I+   G IS  + +DYE     Y+  V A+D          A V I + N
Sbjct: 503 IANINPVPFVINHFTGVISTSENMDYELMPRVYKLRVRASDWGTPYRREVEAPVTIVLNN 562

Query: 135 VNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYE-KMFSI 193
           +ND  P F     E  +P     +L  G  I  V A D D+   V   +    E  +F +
Sbjct: 563 LNDNTPLFEKINCEGTIPR----ELGVGEQITTVSAIDADELQLVQYQVESGNELHLFVL 618

Query: 194 NDSGHI-----SIVDLSALNTSTIQLVVVATDTGN 223
           N +  +     S+VD     TS   L + ATD  N
Sbjct: 619 NPNSGVLSLKQSLVDGLGAKTSFHSLRITATDGEN 653


>gi|197246323|gb|AAI68528.1| pcdh7 protein [Xenopus (Silurana) tropicalis]
          Length = 911

 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 53/173 (30%), Positives = 81/173 (46%), Gaps = 11/173 (6%)

Query: 64  LLTVTTNKPRDLRVKYWLSNDYGERFSIS-RQGDISLMQCLDYETEDSYRFTVYATDT-- 120
           +L    +  ++  + Y L       FSI    GDI++   LD E  D Y F V A D   
Sbjct: 528 VLATDADSGKNAEIAYSLEPSMEGIFSIHPDTGDITVNIILDREQTDRYEFKVIAKDKGI 587

Query: 121 -LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRV 179
            ++  + +V + V + ND +PRF    +  ++      +L P S +G V   D DKG   
Sbjct: 588 PVLQGTTSVVVQVADRNDNEPRFMQDVFTFYVKE----NLQPNSPVGMVTVMDADKGRNA 643

Query: 180 TLSLRGPYEK-MFSI-NDSGHI-SIVDLSALNTSTIQLVVVATDTGNPPRQAS 229
            +SL    +  +FSI ND+G I S V     + ++    V A D G+PPR A+
Sbjct: 644 EMSLFIEEDSDIFSIENDTGTIYSTVSFDREHQTSYTFKVKAVDGGDPPRSAT 696



 Score = 40.0 bits (92), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 38/154 (24%), Positives = 66/154 (42%), Gaps = 30/154 (19%)

Query: 103 LDYETEDSYRFTVYATDTL---MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADL 159
           LD E  DSY  T+   D      ++ + + + + +VND +PRF    YE  L      + 
Sbjct: 237 LDREQRDSYELTLRVRDGGEPPRSSQSILRVLITDVNDNNPRFEKSVYEADLAE----NS 292

Query: 160 TPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSI------------NDSGHISI---VDL 204
            PG+ I ++ A D D G      + G  E +F               +SG +S+   +D 
Sbjct: 293 APGTPILQLRATDYDVG------VNGQIEYVFGAATESVRRLLRLDENSGWLSVLHRIDR 346

Query: 205 SALNTSTIQLVVVATDTGNPPRQASVPAIMHFPE 238
             +N   ++  V+A D G PP+      +++  +
Sbjct: 347 EEVN--QLRFTVMARDRGQPPKTDKATVVLNIKD 378


>gi|1107687|emb|CAA60685.1| homologue of Drosophila Fat protein [Homo sapiens]
          Length = 4590

 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 41/156 (26%), Positives = 78/156 (50%), Gaps = 11/156 (7%)

Query: 33   VSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWL---SNDYGERF 89
            +SK   SL  + F ++ ++ + +E+ PV +++  ++   P    +  W      +Y   F
Sbjct: 1346 ISKPKQSLEPISFEESFFTFTVMESDPVAHMIGVISVEPPG---IPLWFDITGGNYDSHF 1402

Query: 90   SISR-QGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYE 148
             + +  G I + + LD E + +Y  TV ATD   T    V I V++ ND  P+F   +YE
Sbjct: 1403 DVDKGTGTIIVAKPLDAEQKSNYNLTVEATDGTTTILTQVFIKVIDTNDHRPQFSTSKYE 1462

Query: 149  LFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR 184
            + +P     D  P + I ++ A D D+ +++  +L+
Sbjct: 1463 VVIPE----DTAPETEILQISAVDQDEKNKLIYTLQ 1494



 Score = 58.2 bits (139), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 60/244 (24%), Positives = 106/244 (43%), Gaps = 40/244 (16%)

Query: 4    EDDFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYV 63
            E++F    T  VRA+   +  + ++  + V      ++  +FS+  Y+ +  E++PV   
Sbjct: 2667 ENEFF---TFFVRAVDNGSPSKESVVLVYVKILPPEMQLPKFSEPFYTFTVSEDVPVGTE 2723

Query: 64   LLTVTTNKPRDLRVKYWLSN----DYGERFSISRQ-GDISLMQCLDYETEDSYRFTVYAT 118
            +  +       +       N    +  E F I RQ G + L + LD+ET   Y+F++ A 
Sbjct: 2724 IDLIRAEHSGTVLYSLVKGNTPESNRDESFVIDRQSGRLKLEKSLDHETTKWYQFSILAR 2783

Query: 119  ----DTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGD 174
                D  M  S  V+I V + ND  P F    YE F+    + +L  GS + ++ A+D D
Sbjct: 2784 CTQDDHEMVASVDVSIQVKDANDNSPVFESSPYEAFI----VENLPGGSRVIQIRASDAD 2839

Query: 175  KGDRVTLSLRGPYEKMFSINDSGHISIVDLSALNTST----------------IQLVVVA 218
             G    +        M+S++ S  + +++  A+N  T                 Q+ VVA
Sbjct: 2840 SGTNGQV--------MYSLDQSQSVEVIESFAINMETGWITTLKELDHEKRDNYQIKVVA 2891

Query: 219  TDTG 222
            +D G
Sbjct: 2892 SDHG 2895



 Score = 55.8 bits (133), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 64/227 (28%), Positives = 106/227 (46%), Gaps = 26/227 (11%)

Query: 33   VSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTV-TTNKPRDL--RVKYWLSNDYG-ER 88
            V+  G +L    F +NEY V   EN P++ +++ V TT+    +   V Y + ND+  +R
Sbjct: 2483 VTVIGGNLHSPAFLQNEYEVELAENAPLHTLVMEVKTTDGDSGIYGHVTYHIVNDFAKDR 2542

Query: 89   FSISRQGDISLMQCLDYET--EDSYRFTVYATDTLMTTS-ATVNISVVNVNDWDPRFRYP 145
            F I+ +G I  ++ LD ET  E      + A D     +  TVN+ + + ND  P+FR  
Sbjct: 2543 FYINERGQIFTLEKLDRETPAEKVISVRLMAKDAGGKVAFCTVNVILTDDNDNAPQFRAT 2602

Query: 146  QYELFLPHIPLADLTPGSVIGKVEAADGDKGDR--VTLSLRGPYEKM---FSIND-SGHI 199
            +YE+ +     +    G+ + K  A+D D+G    +T ++    E +     IN  SG I
Sbjct: 2603 KYEVNIG----SSAAKGTSVVK-SASDADEGSNADITYAIEADSESVKENLEINKLSGVI 2657

Query: 200  SIVD-LSALNTSTIQLVVVATDTGNPPRQASV-------PAIMHFPE 238
            +  + L  L        V A D G+P +++ V       P  M  P+
Sbjct: 2658 TTKESLIGLENEFFTFFVRAVDNGSPSKESVVLVYVKILPPEMQLPK 2704



 Score = 55.8 bits (133), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 62/215 (28%), Positives = 102/215 (47%), Gaps = 21/215 (9%)

Query: 27   ALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLS---- 82
            A  T+IVS    +     F   EY  +  E++ V   +L V     RD+     ++    
Sbjct: 3214 ATGTVIVSVLDINDNPPVFEYREYGATVSEDILVGTEVLQVYAAS-RDIEANAEITYSII 3272

Query: 83   --NDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVN 136
              N++G +FSI S+ G + +++ LDYE+   Y  TV ATD     ++  ATVN++V ++N
Sbjct: 3273 SGNEHG-KFSIDSKTGAVFIIENLDYESSHEYYLTVEATDGGTPSLSDVATVNVNVTDIN 3331

Query: 137  DWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS-LRGPYEKMFSIND 195
            D  P F    Y   +    + + +  +V+   + ADG     +  S + G     F+I+ 
Sbjct: 3332 DNTPVFSQDTYTTVISEDAVLEQSVITVMA--DDADGPSNSHIHYSIIDGNQGSSFTIDP 3389

Query: 196  -SGHISIVDLSALNTSTIQ---LVVVATDTGNPPR 226
              G + +  L  L+  TI    L V A+D G+PPR
Sbjct: 3390 VRGEVKVTKL--LDRETISGYTLTVQASDNGSPPR 3422



 Score = 55.1 bits (131), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 62/225 (27%), Positives = 107/225 (47%), Gaps = 19/225 (8%)

Query: 13   LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKP 72
            L+VRA   D   R+  A+++V+    +    +FS + Y+++  EN     +L  V     
Sbjct: 3097 LLVRAT--DGGGRFCQASIVVTLEDVNDNAPEFSADPYAITVFENTEPGTLLTRVQATDA 3154

Query: 73   R---DLRVKYWLSNDYGERFSISR-QGDISLMQCLDYETEDSYRFTVYATDT----LMTT 124
                + ++ Y L +    +FSI+   G I L + LD E +  Y  ++ A D      +T 
Sbjct: 3155 DAGLNRKILYSLIDSADGQFSINELSGIIQLEKPLDRELQAVYTLSLKAVDQGLPRRLTA 3214

Query: 125  SATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAA--DGDKGDRVTLS 182
            + TV +SV+++ND  P F Y +Y   +      D+  G+ + +V AA  D +    +T S
Sbjct: 3215 TGTVIVSVLDINDNPPVFEYREYGATVSE----DILVGTEVLQVYAASRDIEANAEITYS 3270

Query: 183  -LRGPYEKMFSIND-SGHISIVD-LSALNTSTIQLVVVATDTGNP 224
             + G     FSI+  +G + I++ L   ++    L V ATD G P
Sbjct: 3271 IISGNEHGKFSIDSKTGAVFIIENLDYESSHEYYLTVEATDGGTP 3315



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 42/145 (28%), Positives = 68/145 (46%), Gaps = 8/145 (5%)

Query: 90   SISRQGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYEL 149
            +I  +  + + + LD E  D+Y  T+ ATD   ++ A V + V++ ND  P      Y  
Sbjct: 2973 TIQNEWKVYVKKPLDREKRDNYLLTITATDGTFSSKAIVEVKVLDANDNSPVCEKTLYSD 3032

Query: 150  FLPHIPLADLTPGSVIGKVEAADGD--KGDRVTLSLRGPYEKMFSIN-DSGHISI-VDLS 205
             +P     D+ PG +I ++ A D D      +T +L G   + F +N D+G +     L 
Sbjct: 3033 TIPE----DVLPGKLIMQISATDADIRSNAEITYTLLGSGAEKFKLNPDTGELKTSTPLD 3088

Query: 206  ALNTSTIQLVVVATDTGNPPRQASV 230
                +   L+V ATD G    QAS+
Sbjct: 3089 REEQAVYHLLVRATDGGGRFCQASI 3113



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 77/162 (47%), Gaps = 21/162 (12%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSN-DYGERFSIS-RQGDISLMQC 102
            F K  YS    E++ V+  ++ V  N P  L+V Y +++ D   +F+I+   G I+++  
Sbjct: 2185 FEKPFYSAEIAESIQVHSPVVHVQANSPEGLKVFYSITDGDPFSQFTINFNTGVINVIAP 2244

Query: 103  LDYETEDSYRFTVYATDTLMTTSATVNISVV--NVNDWDPRFRYPQYELFLPHIPLADLT 160
            LD+E   +Y+ ++ ATD+L    A V + ++  ++ND  P F    Y +         L+
Sbjct: 2245 LDFEAHPAYKLSIRATDSLTGAHAEVFVDIIVDDINDNPPVFAQQSYAV--------TLS 2296

Query: 161  PGSVIG----KVEAADGDKGDRVTLSLRGPYEKMFSINDSGH 198
              SVIG    +V A D D         RG   +MF  +   H
Sbjct: 2297 EASVIGTSVVQVRATDSDSEPN-----RGISYQMFGNHSKSH 2333



 Score = 43.5 bits (101), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 55/215 (25%), Positives = 91/215 (42%), Gaps = 19/215 (8%)

Query: 24  DRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLR---VKYW 80
           DR A   ++V   G +    +F++  Y  +  EN+P+   +++++   P +     V Y 
Sbjct: 442 DRKASTKVLVKVLGANSNPPEFTQTAYKAAFDENVPIGTTIMSLSAVDPDEGENGYVTYS 501

Query: 81  LSNDYGERFSISR-QGDISLMQCLDYE-TEDSYRFTVYATDTLMTTSATVN----ISVVN 134
           ++N     F+I    G +S  + LDYE     Y   + A+D  +     V     I++ N
Sbjct: 502 IANLNHVPFAIDHFTGAVSTSENLDYELMPRVYTLRIRASDWGLPYRREVEVLATITLNN 561

Query: 135 VNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYE-KMFSI 193
           +ND  P F     E  +P     DL  G  I  V A D D+   V   +    E  +FS+
Sbjct: 562 LNDNTPLFEKINCEGTIPR----DLGVGEQITTVSAIDADELQLVQYQIEAGNELDLFSL 617

Query: 194 NDSGHI-----SIVDLSALNTSTIQLVVVATDTGN 223
           N +  +     S++D      S   L + ATD  N
Sbjct: 618 NPNSGVLSLKRSLMDGLGAKVSFHSLRITATDGEN 652



 Score = 42.7 bits (99), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 54/191 (28%), Positives = 86/191 (45%), Gaps = 30/191 (15%)

Query: 56   ENLPVNYVLLTVTTNKP---RDLRVKYWLSNDYG-ERFSISRQ-GDISLMQCLDYETEDS 110
            E+ PV  +++TV+ +     RD  ++Y + +  G   F I  + G I     LD E+   
Sbjct: 1045 EDAPVGSLVMTVSAHDEDAGRDGEIRYSIRDGSGVGVFKIGEETGVIETSDRLDRESTSH 1104

Query: 111  YRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSV-IG 166
            Y  TV+ATD     +++   + I V +VND  P+   P   ++ P I   + +P  V + 
Sbjct: 1105 YWLTVFATDQGVVPLSSFIEIYIEVEDVNDNAPQTSEP---VYYPEI--MENSPKDVSVV 1159

Query: 167  KVEAADGDKGDRVTLSLRGPYEKMFSINDSGHISIVDLSALNTSTIQ-----------LV 215
            ++EA D D      L       K+ S N  G  SI   + L T+T +           L 
Sbjct: 1160 QIEAFDPDSSSNDKLMY-----KITSGNPQGFFSIHPKTGLITTTSRKLDREQQDEHILE 1214

Query: 216  VVATDTGNPPR 226
            V  TD G+PP+
Sbjct: 1215 VTVTDNGSPPK 1225



 Score = 41.6 bits (96), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 56/195 (28%), Positives = 86/195 (44%), Gaps = 20/195 (10%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTTNKPRDL----RVKYWLSNDYGERFSI-SRQGDIS 98
            +F +  Y V   E+  V+  ++ V     +DL     V Y +  D  + FSI S  G ++
Sbjct: 821  EFLQESYFVEVSEDKEVHSEIIQVEATD-KDLGPNGHVTYSILTD-TDTFSIDSVTGVVN 878

Query: 99   LMQCLDYETEDSYRFTVYATDTL-----MTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
            + + LD E +  +   + A D       + ++  V +S+ +VND  P F  P Y + +  
Sbjct: 879  IARPLDRELQHEHSLKIEARDQAREEPQLFSTVVVKVSLEDVNDNPPTFIPPNYRVKV-- 936

Query: 154  IPLADLTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSIND-SGHISIV-DLSALNT 209
                DL  G+VI  +EA D D G   +V  SL    E  F ++  SG + IV  L     
Sbjct: 937  --REDLPEGTVIMWLEAHDPDLGQSGQVRYSLLDHGEGNFDVDKLSGAVRIVQQLDFEKK 994

Query: 210  STIQLVVVATDTGNP 224
                L V A D G P
Sbjct: 995  QVYNLTVRAKDKGKP 1009



 Score = 38.1 bits (87), Expect = 7.9,   Method: Compositional matrix adjust.
 Identities = 42/162 (25%), Positives = 72/162 (44%), Gaps = 14/162 (8%)

Query: 45   FSKNEYSVSALENLPVNY-VLLTVTTNKPRDLRVKYWL-----SNDYGERFSISRQGDIS 98
            FS+  YSV   EN PV + VL  V T++        +       ND  + F ++ QG + 
Sbjct: 3442 FSRGNYSVIIQENKPVGFSVLQLVVTDEDSSHNGPPFFFTIVTGNDE-KAFEVNPQGVLL 3500

Query: 99   LMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIP 155
                +  + +D Y   V   D     +++   ++I V+  + + P       E+F+    
Sbjct: 3501 TSSAIKRKEKDHYLLQVKVADNGKPQLSSLTYIDIRVIEESIYPPAIL--PLEIFI--TS 3556

Query: 156  LADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSG 197
              +   G VIGK+ A D D  D +T SL    + +FS++ +G
Sbjct: 3557 SGEEYSGGVIGKIHATDQDVYDTLTYSLDPQMDNLFSVSSTG 3598


>gi|345781801|ref|XP_532835.3| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 1 [Canis lupus
            familiaris]
          Length = 4589

 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 84/303 (27%), Positives = 140/303 (46%), Gaps = 32/303 (10%)

Query: 5    DDFLQPI-TLVVRAIQYDNQDRY-ALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNY 62
            D  LQ + TL ++A+      R  A  TL+VS    +     F   EY  +  E++ +  
Sbjct: 3189 DRELQAVYTLTLKAVDQGLPRRLTATGTLVVSVLDINDNPPVFEYREYGATVSEDILIGT 3248

Query: 63   VLLTVTTNKPRDLRVKYWLS------NDYGERFSI-SRQGDISLMQCLDYETEDSYRFTV 115
             +L V     RD+     ++      N++G +FSI S+ G I +++ LDYE+   Y  TV
Sbjct: 3249 EVLQVYA-ASRDIEANAEITYSIISGNEHG-KFSIDSKTGAIFIIETLDYESSHEYYLTV 3306

Query: 116  YATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAAD 172
             ATD     ++  ATVNI+V ++ND  P F    Y   +    L + +  +V+   +  D
Sbjct: 3307 EATDGGTPSLSDVATVNINVTDINDNSPVFSQDTYTAVISEDALLEQSVITVMA--DDTD 3364

Query: 173  GDKGDRVTLS-LRGPYEKMFSINDS-GHISIVDLSALNTSTIQ---LVVVATDTGNPPRQ 227
            G    R+  S + G     F+I+ + G + +  L  L+  TI    L V A+D G+PPR 
Sbjct: 3365 GPSNSRIRYSIIDGNQGSPFTIDPAKGEVKVTKL--LDRETISGYTLTVQASDNGSPPRV 3422

Query: 228  ASVPAIMHFPEAIVQQASSKLNSGTSSTVLIILGVVLIVLGFVIILLILYIHKNKHTKNN 287
             +    +   +  V   +   + G  S ++     V    GF ++ LI+    +K + +N
Sbjct: 3423 NTTTVNIDVSD--VNDNAPVFSKGNYSVIIQENKPV----GFSVLQLIV---TDKDSSHN 3473

Query: 288  GPP 290
            GPP
Sbjct: 3474 GPP 3476



 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/198 (23%), Positives = 90/198 (45%), Gaps = 24/198 (12%)

Query: 7    FLQPITLVVRAIQYDNQDRYALATL-------------------IVSKAGTSLRELQFSK 47
            F++P T VV + ++     Y + ++                    +SK   S+  + F +
Sbjct: 1301 FIEPKTGVVSSKKFSGAGEYDILSIKAVDNGRPQKSSTTRLHIEWISKPKPSVEPISFEE 1360

Query: 48   NEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGERFSISR-QGDISLMQCLDYE 106
              ++ + +E+ PV +++  +T   P        +  +Y   F + +  G I + + LD E
Sbjct: 1361 PFFTFTVMESDPVAHMIGVITVEPPGTPLWFDIIGGNYDSDFDVDKGTGTIIVAKPLDAE 1420

Query: 107  TEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIG 166
             + +Y  TV ATD   T    V I V++ ND  P+F   +YE+ +P     D  P + I 
Sbjct: 1421 QKSNYNLTVEATDGTTTILTQVFIQVIDTNDHRPQFSASKYEVVIPE----DTIPETEIL 1476

Query: 167  KVEAADGDKGDRVTLSLR 184
            ++ A D D+ +++  +L+
Sbjct: 1477 QISAVDKDEKNKLIYTLQ 1494



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 59/217 (27%), Positives = 106/217 (48%), Gaps = 18/217 (8%)

Query: 29   ATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTV-TTNKPRDL--RVKYWLSNDY 85
            A + ++  G +L    F ++EY V   EN P++ +++ V  T+    +   + Y + ND+
Sbjct: 2476 AQVHITVIGGNLHSPVFLQSEYEVELAENAPLHTLVIEVKATDGDSGIYGHITYHIVNDF 2535

Query: 86   G-ERFSISRQGDISLMQCLDYET--EDSYRFTVYATDTLMTTS-ATVNISVVNVNDWDPR 141
              +RF  + +G I  ++ LD ET  E      + A D     +  T+N+ + + ND  P+
Sbjct: 2536 AKDRFYTNERGQIFTLEKLDRETPAEKVISIRLMAKDAGGKVAFCTINVILTDDNDNAPQ 2595

Query: 142  FRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDR--VTLSLRGPYEKM---FSIND- 195
            FR  +YE+ +     ++   G+ + KV A+D D+G    VT ++    E +     IN  
Sbjct: 2596 FRATKYEVDIG----SNAPKGTSVIKVLASDADEGSNADVTYAIEADSESVKENLEINKL 2651

Query: 196  SGHISIVD-LSALNTSTIQLVVVATDTGNPPRQASVP 231
            SG I+  + L  L        V A D+G+P +++ VP
Sbjct: 2652 SGIITTKESLIGLENEFFTFFVRAVDSGSPSKESVVP 2688



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 63/226 (27%), Positives = 107/226 (47%), Gaps = 20/226 (8%)

Query: 13   LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALEN----LPVNYVLLTVT 68
            L+V+A   D   R+  A ++++    +    +FS + Y+++  EN     P+  V  T  
Sbjct: 3095 LLVKAT--DGGGRFCEANIVLTVEDVNDNAPEFSADPYTITVFENTEPGTPLTRVQATDA 3152

Query: 69   TNKPRDLRVKYWLSNDYGERFSISR-QGDISLMQCLDYETEDSYRFTVYATDT----LMT 123
                 + ++ Y L N    +FSI+   G I L + LD E +  Y  T+ A D      +T
Sbjct: 3153 DAGXLNRKISYSLINSADGQFSINELSGIIQLEKPLDRELQAVYTLTLKAVDQGLPRRLT 3212

Query: 124  TSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAA--DGDKGDRVTL 181
             + T+ +SV+++ND  P F Y +Y   +      D+  G+ + +V AA  D +    +T 
Sbjct: 3213 ATGTLVVSVLDINDNPPVFEYREYGATVSE----DILIGTEVLQVYAASRDIEANAEITY 3268

Query: 182  S-LRGPYEKMFSIND-SGHISIVD-LSALNTSTIQLVVVATDTGNP 224
            S + G     FSI+  +G I I++ L   ++    L V ATD G P
Sbjct: 3269 SIISGNEHGKFSIDSKTGAIFIIETLDYESSHEYYLTVEATDGGTP 3314



 Score = 55.5 bits (132), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 59/203 (29%), Positives = 98/203 (48%), Gaps = 27/203 (13%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSN-DYGERFSIS-RQGDISLMQC 102
            F K  YS    EN+ ++  ++ +  N P  L+V Y +++ D   +F+I+   G I+++  
Sbjct: 2182 FEKPFYSAEVPENIQMHSPVVHIQANSPEGLKVFYSITDGDPFSQFTINFNTGVINVIAP 2241

Query: 103  LDYETEDSYRFTVYATDTLMTTSATVNISVV--NVNDWDPRFRYPQYELFLPHIPLADLT 160
            LD+E+  +Y+ ++ ATD+L    A V + ++  ++ND  P F    Y           L+
Sbjct: 2242 LDFESHPAYKLSIRATDSLTGAHAEVFVDIIVEDINDNPPVFVQQSY--------ATTLS 2293

Query: 161  PGSVIG----KVEAADGDK--GDRVTLSLRGPYEK---MFSINDS-GHISIVDLSALNTS 210
              SVIG    +V A D D      ++  + G + K    F I+ S G IS+V   AL+  
Sbjct: 2294 EASVIGTSVIQVRATDSDSEPNRGISYHMFGNHSKSHDHFHIDSSTGLISLV--RALDYE 2351

Query: 211  TIQ---LVVVATDTGNPPRQASV 230
              Q   + V A D G PP  + V
Sbjct: 2352 QFQQHKIFVRAVDGGMPPLSSDV 2374



 Score = 54.3 bits (129), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 42/145 (28%), Positives = 69/145 (47%), Gaps = 8/145 (5%)

Query: 90   SISRQGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYEL 149
            +I  +  + + + LD E  D+Y  T+ ATD   ++ A V + V++ ND  P      Y  
Sbjct: 2971 NIQNEWKVYVKKPLDREKRDNYLLTITATDGTFSSKAIVEVKVLDANDNSPICEKTLYSD 3030

Query: 150  FLPHIPLADLTPGSVIGKVEAADGD--KGDRVTLSLRGPYEKMFSIN-DSGHI-SIVDLS 205
             +P     D  PG +I +V A D D      +T +L GP  + F +N D+G + ++  L 
Sbjct: 3031 TIPE----DAFPGKLIMQVSATDADIRSNAEITYTLFGPGAEKFKLNPDTGELKTLAPLD 3086

Query: 206  ALNTSTIQLVVVATDTGNPPRQASV 230
                    L+V ATD G    +A++
Sbjct: 3087 REEQEVYNLLVKATDGGGRFCEANI 3111



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 57/244 (23%), Positives = 105/244 (43%), Gaps = 40/244 (16%)

Query: 4    EDDFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYV 63
            E++F    T  VRA+   +  + ++  + V      ++  +FS+  Y+ +  E++P+   
Sbjct: 2665 ENEFF---TFFVRAVDSGSPSKESVVPVYVKILPPEIQLPKFSEPFYTYTVSEDMPIGTE 2721

Query: 64   LLTVTTNKPRDLRVKYWLSN----DYGERFSISRQ-GDISLMQCLDYETEDSYRFTVYA- 117
            +  +       +       N    +  E F I RQ G + L + LD+ET   Y+F++ A 
Sbjct: 2722 IDLIRAEHSGTVLYSLIKGNTPESNRDEFFVIDRQSGRLKLEKSLDHETTKWYQFSILAR 2781

Query: 118  ---TDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGD 174
                D  +  S  V+I V + ND  P      YE F+    + +L  GS + ++ A+D D
Sbjct: 2782 CTHEDYEVVASVDVSIQVKDANDNSPVLESNPYEAFI----VENLPAGSRVIQIRASDLD 2837

Query: 175  KGDRVTLSLRGPYEKMFSINDSGHISIVDLSALNTST----------------IQLVVVA 218
             G    +        M+S++ S  + +++  A+N  T                 Q+ VVA
Sbjct: 2838 SGTNGQV--------MYSLDQSQSVEVIESFAINMETGWISTLKELDHEKRDRYQIQVVA 2889

Query: 219  TDTG 222
            +D G
Sbjct: 2890 SDHG 2893



 Score = 46.2 bits (108), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 42/142 (29%), Positives = 67/142 (47%), Gaps = 22/142 (15%)

Query: 48   NEYSVSALENLPVNYVLLTVTTNKPRDL------RVKYWLSNDYG----ERFSISRQ-GD 96
            N Y    +ENLP    ++ +   +  DL      +V Y L         E F+I+ + G 
Sbjct: 2812 NPYEAFIVENLPAGSRVIQI---RASDLDSGTNGQVMYSLDQSQSVEVIESFAINMETGW 2868

Query: 97   ISLMQCLDYETEDSYRFTVYATD----TLMTTSATVNISVVNVNDWDPRFRYPQYELFLP 152
            IS ++ LD+E  D Y+  V A+D      ++++A V+++V +VND  PRF    Y+  + 
Sbjct: 2869 ISTLKELDHEKRDRYQIQVVASDHGEKVQLSSTAIVDVTVTDVNDSPPRFTAEIYKGTVS 2928

Query: 153  HIPLADLTPGSVIGKVEAADGD 174
                 D  PG VI  +   D D
Sbjct: 2929 E----DDPPGGVIAILSTTDAD 2946



 Score = 44.3 bits (103), Expect = 0.092,   Method: Compositional matrix adjust.
 Identities = 44/162 (27%), Positives = 74/162 (45%), Gaps = 14/162 (8%)

Query: 45   FSKNEYSVSALENLPVNY-VLLTVTTNKPRDLRVKYWL-----SNDYGERFSISRQGDIS 98
            FSK  YSV   EN PV + VL  + T+K        +       ND G  F +++QG + 
Sbjct: 3441 FSKGNYSVIIQENKPVGFSVLQLIVTDKDSSHNGPPFFFTIVSGNDDGA-FEVNQQGVLL 3499

Query: 99   LMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIP 155
                +  + +D Y   V   D     +++   ++I V+  + + P       E+F+    
Sbjct: 3500 TSGIIKRKMKDRYLLHVKVADNGKPQLSSLTYIDIKVIEESIYPPAIL--PLEIFI--TA 3555

Query: 156  LADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSG 197
              +   G VIGK+ A D D  D ++ SL    +K+FS++ +G
Sbjct: 3556 FGEEYSGGVIGKIHATDQDVYDTLSYSLDPQMDKLFSVSSTG 3597



 Score = 43.1 bits (100), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 54/195 (27%), Positives = 87/195 (44%), Gaps = 20/195 (10%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTTNKPRDL----RVKYWLSNDYGERFSI-SRQGDIS 98
            +F +  Y V   E+  +N  ++ V     +DL     V Y +  D  ++FSI S  G + 
Sbjct: 821  EFLQESYFVEVSEDKEINSEIIQVEATD-KDLGPNGHVTYSILTD-TDKFSIDSMTGVVK 878

Query: 99   LMQCLDYETEDSYRFTVYATDTL-----MTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
            ++  LD E +  +   + A D       + ++  + +S+ +VND  P+F  P Y + +  
Sbjct: 879  IVYPLDREVQQVHYLKIEARDQAREEPQLLSTVLLKVSLEDVNDNPPKFIPPNYRVKV-- 936

Query: 154  IPLADLTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSIND-SGHISIVD-LSALNT 209
                DL  G++I  +EA D D G   +V  SL    E  F ++  SG + IV  L     
Sbjct: 937  --REDLPEGTIIMWLEAYDPDLGQSSQVRYSLLDHGEGHFDVDKLSGAVRIVQHLDFEKK 994

Query: 210  STIQLVVVATDTGNP 224
                L V A D G P
Sbjct: 995  QVYNLTVRAKDKGKP 1009



 Score = 43.1 bits (100), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 63/230 (27%), Positives = 97/230 (42%), Gaps = 38/230 (16%)

Query: 44   QFSKNEYSVSALEN-LPVNYVLLTVTTNKPRDLRVKYWLSNDYG----ERFSIS-RQGDI 97
            QFS ++Y V   E+ +P   +L     +K    ++ Y L +       ++F +    G +
Sbjct: 1455 QFSASKYEVVIPEDTIPETEILQISAVDKDEKNKLIYTLQSSSDPLSLKKFRLDPATGSL 1514

Query: 98   SLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHI 154
            S  + LD+E    +  TV   D    +    A + ++V + ND  P F    YE  +   
Sbjct: 1515 STSETLDHEATHQHVLTVMVRDQDVPVKRNFARIVVNVSDTNDHAPWFTSSSYEGRV--- 1571

Query: 155  PLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSGHIS---IVD--LSALNT 209
                   GSV+ +V A D DKG           E ++SI +SG+I     +D  L ++ T
Sbjct: 1572 -YESAAVGSVVLQVTALDKDKGKNA--------EVLYSI-ESGNIGNSFTIDPVLGSIKT 1621

Query: 210  S---------TIQLVVVATDTGNPPRQASVPAIMHFPEAIVQQASSKLNS 250
            +            L+V ATD GNPP   S  A +H    I   AS K  S
Sbjct: 1622 ARELDRNSQVEYDLMVKATDQGNPP--MSEIASVHVSVTIADNASPKFTS 1669



 Score = 41.2 bits (95), Expect = 0.92,   Method: Compositional matrix adjust.
 Identities = 54/191 (28%), Positives = 85/191 (44%), Gaps = 30/191 (15%)

Query: 56   ENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYG-ERFSISRQ-GDISLMQCLDYETEDS 110
            E++PV   ++TV+    +  RD  ++Y + +  G   F I  + G I     LD E+   
Sbjct: 1045 EDVPVGSSVMTVSARDEDTGRDGEIRYSIRDGSGVGVFKIDEETGVIETSDRLDRESTSH 1104

Query: 111  YRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSV-IG 166
            Y  TVYA D     +++   + I V +VND  P+   P   ++ P I   + +P  V + 
Sbjct: 1105 YWLTVYAADRGVVPLSSFIEIYIEVEDVNDNAPQTSEP---VYYPEI--IENSPKDVSVV 1159

Query: 167  KVEAADGDKGDRVTLSLRGPYEKMFSINDSGHISIVDLSALNTSTIQ-----------LV 215
            ++EA D D      L       K+ S N  G  SI   + L T+T +           L 
Sbjct: 1160 QIEAFDPDSSSNDKLMY-----KITSGNPQGFFSIHPKTGLITTTSRKLDREQQDEHILE 1214

Query: 216  VVATDTGNPPR 226
            V  TD G+PP+
Sbjct: 1215 VTVTDNGSPPK 1225



 Score = 40.4 bits (93), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 59/215 (27%), Positives = 92/215 (42%), Gaps = 19/215 (8%)

Query: 24  DRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLR---VKYW 80
           DR A   ++V     +    +F++  Y  S  EN+P+   +++V+   P +     V Y 
Sbjct: 442 DRRASTRVLVKVLSANSNPPEFTQTAYKASFDENVPIGTAVMSVSAVDPDEGENGYVTYS 501

Query: 81  LSNDYGERFSISR-QGDISLMQCLDYE-TEDSYRFTVYATDTLMTTSATVN----ISVVN 134
           ++N     F I    G +S  + LDYE     Y   + A+D  +     V     +++ N
Sbjct: 502 IANLNHVPFVIDHFTGAVSTSENLDYELMPRVYTLRIRASDWGLPYRREVEVLATVTLNN 561

Query: 135 VNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYE-KMFSI 193
           +ND  P F     E  +P     DL  G  I  V A D D+   V   +    E  +FS+
Sbjct: 562 LNDNTPLFEKINCEGTIPR----DLGVGEQITTVSAIDADELQLVRYQIEAGNELDLFSL 617

Query: 194 N-DSGHISIVD--LSALNT--STIQLVVVATDTGN 223
           N +SG +S+    L  L T  S   L + ATD  N
Sbjct: 618 NPNSGVLSLKQSLLEGLGTRVSFHSLRITATDGEN 652



 Score = 38.1 bits (87), Expect = 8.1,   Method: Compositional matrix adjust.
 Identities = 45/171 (26%), Positives = 80/171 (46%), Gaps = 20/171 (11%)

Query: 11   ITLVVRAIQYDNQD---RYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTV 67
            +T++VR     +QD   +   A ++V+ + T+     F+ + Y     E+  V  V+L V
Sbjct: 1530 LTVMVR-----DQDVPVKRNFARIVVNVSDTNDHAPWFTSSSYEGRVYESAAVGSVVLQV 1584

Query: 68   TT---NKPRDLRVKYWL-SNDYGERFSISR-QGDISLMQCLDYETEDSYRFTVYATDT-- 120
            T    +K ++  V Y + S + G  F+I    G I   + LD  ++  Y   V ATD   
Sbjct: 1585 TALDKDKGKNAEVLYSIESGNIGNSFTIDPVLGSIKTARELDRNSQVEYDLMVKATDQGN 1644

Query: 121  -LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEA 170
              M+  A+V++SV   ++  P+F   +Y + +       +  GS +G V A
Sbjct: 1645 PPMSEIASVHVSVTIADNASPKFTSKEYSVEISET----IGVGSFVGMVTA 1691


>gi|326923240|ref|XP_003207847.1| PREDICTED: protocadherin-15-like [Meleagris gallopavo]
          Length = 2258

 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 67/246 (27%), Positives = 118/246 (47%), Gaps = 27/246 (10%)

Query: 6   DFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVL- 64
           D  Q   LV++A Q +     A A L +     + ++  F+K+ Y    LE+ PV   + 
Sbjct: 422 DLHQKFDLVIKAEQDNGHPLPAFANLHIEVLDENNQKPYFTKSTYEGFILESSPVGTTIS 481

Query: 65  ----------LTVTTN---KPRDLRVKYWLSNDYGERFSISRQG---DISLMQCLDYETE 108
                     +TV  N   + +D ++  +L NDY   F++++ G    ++L+Q +D E +
Sbjct: 482 DSRNLTSPLQITVLDNDVEETKDPQLHLFL-NDYNTFFTVTQSGITRYLTLLQPVDREAQ 540

Query: 109 DSYRFTVYATDTLM-TTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGK 167
             Y F++ A+D +  +T  TVNI V++ ND  P F    Y + +      D+ PG  + K
Sbjct: 541 QLYTFSMIASDGVQESTPVTVNIVVIDANDNSPTFSNISYNVKI----YTDMGPGEGVIK 596

Query: 168 VEAADGDKG--DRVTLSLRGPYEKMFSIND-SGHISIVDLSALNTS-TIQLVVVATDTGN 223
           + A D D+G   ++   +    +  F IND +G I+I     L+   +  L V A+D+  
Sbjct: 597 LTAVDADEGPNGQIVYEILAGDQGDFIINDRTGLIAIAPGVVLSVGRSYALTVKASDSAP 656

Query: 224 PPRQAS 229
           P ++ S
Sbjct: 657 PAQRRS 662



 Score = 61.2 bits (147), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 59/195 (30%), Positives = 101/195 (51%), Gaps = 14/195 (7%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSN-DYGERFSISRQ-GDISLMQ 101
           +F +  YS+   E +    +LL +         +KY + N D  + F++S+  G ++L +
Sbjct: 681 RFPQLMYSLEVSEAMRTGAILLNLQAFDREGDPIKYLIENGDPQQVFNLSQSSGLLALEK 740

Query: 102 CLDYETEDSYRFTVYATDTL--MTTSATVNISVVNVNDWDPRFRYPQYELFLP-HIPLAD 158
            LD E+ D Y   V A+D     T++ATVNI V +VND  P F     ++FLP ++ + +
Sbjct: 741 PLDRESTDRYILIVTASDGRPDGTSTATVNIVVTDVNDNGPVF-----DMFLPKNLSVQE 795

Query: 159 LTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDSGHI-SIVDLSALNTSTIQLV 215
               + +G+V A D D G   +V  SL   ++ +F I  +G I + V L+       +L+
Sbjct: 796 EEANAFVGQVRATDPDAGVNGQVHYSLAN-FKNLFRITSNGSIYTAVKLNREVRDYYELI 854

Query: 216 VVATDTGNPPRQASV 230
           V ATD    PR++++
Sbjct: 855 VEATDGAVDPRRSTL 869



 Score = 58.2 bits (139), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 62/201 (30%), Positives = 98/201 (48%), Gaps = 26/201 (12%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDL--RVKYWLSNDYG-ERFSISR-QGDISLM 100
            F+   Y+VS  ENLP   V L +   K  DL   V Y +      E F++++  G++SL+
Sbjct: 885  FTNASYAVSVPENLPPGTVFLQIEA-KDVDLGSNVTYRIRTQEALEYFALNKYTGELSLL 943

Query: 101  QCLDYE----TEDSYRFTVYATDTLMTTS---ATVNISVVNVNDWDPRFRYPQYELFLPH 153
            + LDYE    T+ ++ F V A D+  T     ATV + V ++ND+ P F    Y   +  
Sbjct: 944  KSLDYESFSDTDATFTFLVEAFDSKGTMPPGLATVTVRVKDMNDYSPVFSKTLYRGMV-- 1001

Query: 154  IPLADLTPGSVIGKVEAAD----GDKGDRVTLS---LRGPYE-KMFSINDSGH--ISIVD 203
                D   G+VI  V A D    G    RV      ++ PY   +F + +S    ++ V+
Sbjct: 1002 --APDAVKGTVITTVSAEDQDPPGTPASRVRYKVDVVQFPYSASIFDVEESSGRVVTRVN 1059

Query: 204  LSALNTSTIQLVVVATDTGNP 224
            L+   ++  +LVV+A D G+P
Sbjct: 1060 LNEEPSTVFKLVVIAYDDGDP 1080



 Score = 48.5 bits (114), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 40/132 (30%), Positives = 67/132 (50%), Gaps = 10/132 (7%)

Query: 76  RVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDTLM---TTSATVNISV 132
           +V Y L+N +   F I+  G I     L+ E  D Y   V ATD  +    ++ T+ I V
Sbjct: 817 QVHYSLAN-FKNLFRITSNGSIYTAVKLNREVRDYYELIVEATDGAVDPRRSTLTLAIKV 875

Query: 133 VNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYE-KMF 191
           ++++D  P F    Y + +P     +L PG+V  ++EA D D G  VT  +R     + F
Sbjct: 876 LDIDDNSPVFTNASYAVSVPE----NLPPGTVFLQIEAKDVDLGSNVTYRIRTQEALEYF 931

Query: 192 SIND-SGHISIV 202
           ++N  +G +S++
Sbjct: 932 ALNKYTGELSLL 943


>gi|57997201|emb|CAD38850.2| hypothetical protein [Homo sapiens]
          Length = 956

 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 61/195 (31%), Positives = 100/195 (51%), Gaps = 14/195 (7%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGER-FSISRQ-GDISLMQ 101
           +F +  YS+   E + V  VLL +         + Y + N   +R F++S   G ++L +
Sbjct: 615 RFPQLMYSLEISEAMRVGAVLLNLQATDREGDSITYAIENGDPQRVFNLSETTGILTLGK 674

Query: 102 CLDYETEDSYRFTVYATDTL--MTTSATVNISVVNVNDWDPRFRYPQYELFLP-HIPLAD 158
            LD E+ D Y   + A+D     T++ATVNI V +VND  P F     + +LP ++ + +
Sbjct: 675 ALDRESTDRYILIITASDGRPDGTSTATVNIVVTDVNDNAPVF-----DPYLPRNLSVVE 729

Query: 159 LTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDSGHI-SIVDLSALNTSTIQLV 215
               + +G+V+A D D G   +V  SL G +  +F I  +G I + V L+       +LV
Sbjct: 730 EEANAFVGQVKATDPDAGINGQVHYSL-GNFNNLFRITSNGSIYTAVKLNREVRDYYELV 788

Query: 216 VVATDTGNPPRQASV 230
           VVATD    PR +++
Sbjct: 789 VVATDGAVHPRHSTL 803



 Score = 55.5 bits (132), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 62/241 (25%), Positives = 105/241 (43%), Gaps = 27/241 (11%)

Query: 6   DFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVN---- 61
           DF Q   LV++A Q +     A A L +     + +   F+   Y    LE+ PV     
Sbjct: 356 DFHQKFDLVIKAEQDNGHPLPAFAGLHIEILDENNQSPYFTMPSYQGYILESAPVGATIS 415

Query: 62  ----------YVLLTVTTNKPRDLRVKYWLSNDYGERFSISRQG---DISLMQCLDYETE 108
                      V L       +D  +  +L NDY   F++++ G    ++L+Q +D E +
Sbjct: 416 DSLNLTSPLRIVALDKDIEATKDPELHLFL-NDYTSVFTVTQTGITRYLTLLQPVDREEQ 474

Query: 109 DSYRFTVYATDTLMTTSAT-VNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGK 167
            +Y F++ A D +  +    VNI V++ ND  P F    Y++++      D+ PG  + +
Sbjct: 475 QTYTFSITAFDGVQESEPVIVNIQVMDANDNTPTFPEISYDVYV----YTDMRPGDSVIQ 530

Query: 168 VEAADGDKGD--RVTLSLRGPYEKMFSIND-SGHISIV-DLSALNTSTIQLVVVATDTGN 223
           + A D D+G    +T  +    +  F IN  +G I+I   +  +   T  L V A D   
Sbjct: 531 LTAVDADEGSNGEITYEILVGAQGDFIINKTTGLITIAPGVEMIVGRTYALTVQAADNAP 590

Query: 224 P 224
           P
Sbjct: 591 P 591



 Score = 46.6 bits (109), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 56/119 (47%), Gaps = 8/119 (6%)

Query: 76  RVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDTLMT---TSATVNISV 132
           +V Y L N +   F I+  G I     L+ E  D Y   V ATD  +    ++ T+ I V
Sbjct: 751 QVHYSLGN-FNNLFRITSNGSIYTAVKLNREVRDYYELVVVATDGAVHPRHSTLTLAIKV 809

Query: 133 VNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMF 191
           ++++D  P F    Y + +      +L  G+ I ++EA D D G  V+  +R P  K F
Sbjct: 810 LDIDDNSPVFTNSTYTVLVEE----NLPAGTTILQIEAKDVDLGANVSYRIRSPEVKHF 864



 Score = 40.8 bits (94), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 51/173 (29%), Positives = 74/173 (42%), Gaps = 16/173 (9%)

Query: 13  LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKP 72
           LVV A       R++  TL +           F+ + Y+V   ENLP    +L +   K 
Sbjct: 787 LVVVATDGAVHPRHSTLTLAIKVLDIDDNSPVFTNSTYTVLVEENLPAGTTILQIEA-KD 845

Query: 73  RDL--RVKYWLSNDYGERFSISR--QGDISLMQCLDYET----EDSYRFTVYATD---TL 121
            DL   V Y + +   + F       G++SL++ LDYE     E S  F V A D   T+
Sbjct: 846 VDLGANVSYRIRSPEVKHFFALHPFTGELSLLRSLDYEAFPDQEASITFLVEAFDIYGTM 905

Query: 122 MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGD 174
               ATV + V ++ND+ P F    Y+  +      D   G+ I  V A D D
Sbjct: 906 PPGIATVTVIVKDMNDYPPVFSKQIYKGMV----APDAVKGTPITTVYAEDAD 954


>gi|119625020|gb|EAX04615.1| FAT tumor suppressor homolog 1 (Drosophila), isoform CRA_b [Homo
            sapiens]
          Length = 3841

 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 41/156 (26%), Positives = 78/156 (50%), Gaps = 11/156 (7%)

Query: 33   VSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWL---SNDYGERF 89
            +SK   SL  + F ++ ++ + +E+ PV +++  ++   P    +  W      +Y   F
Sbjct: 1346 ISKPKPSLEPISFEESFFTFTVMESDPVAHMIGVISVEPPG---IPLWFDITGGNYDSHF 1402

Query: 90   SISR-QGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYE 148
             + +  G I + + LD E + +Y  TV ATD   T    V I V++ ND  P+F   +YE
Sbjct: 1403 DVDKGTGTIIVAKPLDAEQKSNYNLTVEATDGTTTILTQVFIKVIDTNDHRPQFSTSKYE 1462

Query: 149  LFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR 184
            + +P     D  P + I ++ A D D+ +++  +L+
Sbjct: 1463 VVIPE----DTAPETEILQISAVDQDEKNKLIYTLQ 1494



 Score = 61.2 bits (147), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 65/227 (28%), Positives = 107/227 (47%), Gaps = 25/227 (11%)

Query: 33   VSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTV-TTNKPRDL--RVKYWLSNDYG-ER 88
            V+  G +L    F +NEY V   EN P++ +++ V TT+    +   V Y + ND+  +R
Sbjct: 2483 VTVIGGNLHSPAFLQNEYEVELAENAPLHTLVMEVKTTDGDSGIYGHVTYHIVNDFAKDR 2542

Query: 89   FSISRQGDISLMQCLDYET--EDSYRFTVYATDTLMTTS-ATVNISVVNVNDWDPRFRYP 145
            F I+ +G I  ++ LD ET  E      + A D     +  TVN+ + + ND  P+FR  
Sbjct: 2543 FYINERGQIFTLEKLDRETPAEKVISVRLMAKDAGGKVAFCTVNVILTDDNDNAPQFRAT 2602

Query: 146  QYELFLPHIPLADLTPGSVIGKVEAADGDKGDR--VTLSLRGPYEKM---FSIND-SGHI 199
            +YE+ +     +    G+ + KV A+D D+G    +T ++    E +     IN  SG I
Sbjct: 2603 KYEVNIG----SSAAKGTSVVKVLASDADEGSNADITYAIEADSESVKENLEINKLSGVI 2658

Query: 200  SIVD-LSALNTSTIQLVVVATDTGNPPRQASV-------PAIMHFPE 238
            +  + L  L        V A D G+P +++ V       P  M  P+
Sbjct: 2659 TTKESLIGLENEFFTFFVRAVDNGSPSKESVVLVYVKILPPEMQLPK 2705



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 59/244 (24%), Positives = 106/244 (43%), Gaps = 40/244 (16%)

Query: 4    EDDFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYV 63
            E++F    T  VRA+   +  + ++  + V      ++  +FS+  Y+ +  E++P+   
Sbjct: 2668 ENEFF---TFFVRAVDNGSPSKESVVLVYVKILPPEMQLPKFSEPFYTFTVSEDVPIGTE 2724

Query: 64   LLTVTTNKPRDLRVKYWLSN----DYGERFSISRQ-GDISLMQCLDYETEDSYRFTVYAT 118
            +  +       +       N    +  E F I RQ G + L + LD+ET   Y+F++ A 
Sbjct: 2725 IDLIRAEHSGTVLYSLVKGNTPESNRDESFVIDRQSGRLKLEKSLDHETTKWYQFSILAR 2784

Query: 119  ----DTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGD 174
                D  M  S  V+I V + ND  P F    YE F+    + +L  GS + ++ A+D D
Sbjct: 2785 CTQDDHEMVASVDVSIQVKDANDNSPVFESSPYEAFI----VENLPGGSRVIQIRASDAD 2840

Query: 175  KGDRVTLSLRGPYEKMFSINDSGHISIVDLSALNTST----------------IQLVVVA 218
             G    +        M+S++ S  + +++  A+N  T                 Q+ VVA
Sbjct: 2841 SGTNGQV--------MYSLDQSQSVEVIESFAINMETGWITTLKELDHEKRDNYQIKVVA 2892

Query: 219  TDTG 222
            +D G
Sbjct: 2893 SDHG 2896



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 62/215 (28%), Positives = 102/215 (47%), Gaps = 21/215 (9%)

Query: 27   ALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLS---- 82
            A  T+IVS    +     F   EY  +  E++ V   +L V     RD+     ++    
Sbjct: 3215 ATGTVIVSVLDINDNPPVFEYREYGATVSEDILVGTEVLQVYA-ASRDIEANAEITYSII 3273

Query: 83   --NDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVN 136
              N++G +FSI S+ G + +++ LDYE+   Y  TV ATD     ++  ATVN++V ++N
Sbjct: 3274 SGNEHG-KFSIDSKTGAVFIIENLDYESSHEYYLTVEATDGGTPSLSDVATVNVNVTDIN 3332

Query: 137  DWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS-LRGPYEKMFSIND 195
            D  P F    Y   +    + + +  +V+   + ADG     +  S + G     F+I+ 
Sbjct: 3333 DNTPVFSQDTYTTVISEDAVLEQSVITVMA--DDADGPSNSHIHYSIIDGNQGSSFTIDP 3390

Query: 196  -SGHISIVDLSALNTSTIQ---LVVVATDTGNPPR 226
              G + +  L  L+  TI    L V A+D G+PPR
Sbjct: 3391 VRGEVKVTKL--LDRETISGYTLTVQASDNGSPPR 3423



 Score = 54.7 bits (130), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 42/145 (28%), Positives = 68/145 (46%), Gaps = 8/145 (5%)

Query: 90   SISRQGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYEL 149
            +I  +  + + + LD E  D+Y  T+ ATD   ++ A V + V++ ND  P      Y  
Sbjct: 2974 TIQNEWKVYVKKPLDREKRDNYLLTITATDGTFSSKAIVEVKVLDANDNSPVCEKTLYSD 3033

Query: 150  FLPHIPLADLTPGSVIGKVEAADGD--KGDRVTLSLRGPYEKMFSIN-DSGHISI-VDLS 205
             +P     D+ PG +I ++ A D D      +T +L G   + F +N D+G +     L 
Sbjct: 3034 TIPE----DVLPGKLIMQISATDADIRSNAEITYTLLGSGAEKFKLNPDTGELKTSTPLD 3089

Query: 206  ALNTSTIQLVVVATDTGNPPRQASV 230
                +   L+V ATD G    QAS+
Sbjct: 3090 REEQAVYHLLVRATDGGGRFCQASI 3114



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 61/225 (27%), Positives = 108/225 (48%), Gaps = 19/225 (8%)

Query: 13   LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVT---T 69
            L+VRA   D   R+  A+++++    +    +FS + Y+++  EN     +L  V     
Sbjct: 3098 LLVRAT--DGGGRFCQASIVLTLEDVNDNAPEFSADPYAITVFENTEPGTLLTRVQATDA 3155

Query: 70   NKPRDLRVKYWLSNDYGERFSISR-QGDISLMQCLDYETEDSYRFTVYATDT----LMTT 124
            +   + ++ Y L +    +FSI+   G I L + LD E +  Y  ++ A D      +T 
Sbjct: 3156 DAGLNRKILYSLIDSADGQFSINELSGIIQLEKPLDRELQAVYTLSLKAVDQGLPRRLTA 3215

Query: 125  SATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAA--DGDKGDRVTLS 182
            + TV +SV+++ND  P F Y +Y   +      D+  G+ + +V AA  D +    +T S
Sbjct: 3216 TGTVIVSVLDINDNPPVFEYREYGATVSE----DILVGTEVLQVYAASRDIEANAEITYS 3271

Query: 183  -LRGPYEKMFSIND-SGHISIVD-LSALNTSTIQLVVVATDTGNP 224
             + G     FSI+  +G + I++ L   ++    L V ATD G P
Sbjct: 3272 IISGNEHGKFSIDSKTGAVFIIENLDYESSHEYYLTVEATDGGTP 3316



 Score = 51.6 bits (122), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 77/162 (47%), Gaps = 21/162 (12%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSN-DYGERFSIS-RQGDISLMQC 102
            F K  YS    E++ V+  ++ V  N P  L+V Y +++ D   +F+I+   G I+++  
Sbjct: 2185 FEKPFYSAEIAESIQVHSPVVHVQANSPEGLKVFYSITDGDPFSQFTINFNTGVINVIAP 2244

Query: 103  LDYETEDSYRFTVYATDTLMTTSATVNISVV--NVNDWDPRFRYPQYELFLPHIPLADLT 160
            LD+E   +Y+ ++ ATD+L    A V + ++  ++ND  P F    Y +         L+
Sbjct: 2245 LDFEAHPAYKLSIRATDSLTGAHAEVFVDIIVDDINDNPPVFAQQSYAV--------TLS 2296

Query: 161  PGSVIG----KVEAADGDKGDRVTLSLRGPYEKMFSINDSGH 198
              SVIG    +V A D D         RG   +MF  +   H
Sbjct: 2297 EASVIGTSVVQVRATDSDSEPN-----RGISYQMFGNHSKSH 2333



 Score = 42.7 bits (99), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 55/215 (25%), Positives = 91/215 (42%), Gaps = 19/215 (8%)

Query: 24  DRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLR---VKYW 80
           DR A   ++V   G +    +F++  Y  +  EN+P+   +++++   P +     V Y 
Sbjct: 442 DRKASTKVLVKVLGANSNPPEFTQTAYKAAFDENVPIGTTVMSLSAVDPDEGENGYVTYS 501

Query: 81  LSNDYGERFSISR-QGDISLMQCLDYE-TEDSYRFTVYATDTLMTTSATVN----ISVVN 134
           ++N     F+I    G +S  + LDYE     Y   + A+D  +     V     I++ N
Sbjct: 502 IANLNHVPFAIDHFTGAVSTSENLDYELMPRVYTLRIRASDWGLPYRREVEVLATITLNN 561

Query: 135 VNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYE-KMFSI 193
           +ND  P F     E  +P     DL  G  I  V A D D+   V   +    E  +FS+
Sbjct: 562 LNDNTPLFEKINCEGTIPR----DLGVGEQITTVSAIDADELQLVQYQIEAGNELDLFSL 617

Query: 194 NDSGHI-----SIVDLSALNTSTIQLVVVATDTGN 223
           N +  +     S++D      S   L + ATD  N
Sbjct: 618 NPNSGVLSLKRSLMDGLGAKVSFHSLRITATDGEN 652



 Score = 42.4 bits (98), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 55/191 (28%), Positives = 85/191 (44%), Gaps = 30/191 (15%)

Query: 56   ENLPVNYVLLTVTTNKP---RDLRVKYWLSNDYG-ERFSISRQ-GDISLMQCLDYETEDS 110
            E+ PV  +++TV+ +     RD  ++Y + +  G   F I  + G I     LD E+   
Sbjct: 1045 EDAPVGSLVMTVSAHDEDAGRDGEIRYSIRDGSGVGVFKIGEETGVIETSDRLDRESTSH 1104

Query: 111  YRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSV-IG 166
            Y  TV+ATD     +++   + I V +VND  P+   P Y    P I   + +P  V + 
Sbjct: 1105 YWLTVFATDQGVVPLSSFIEIYIEVEDVNDNAPQTSEPVY---YPEI--MENSPKDVSVV 1159

Query: 167  KVEAADGDKGDRVTLSLRGPYEKMFSINDSGHISIVDLSALNTSTIQ-----------LV 215
            ++EA D D      L       K+ S N  G  SI   + L T+T +           L 
Sbjct: 1160 QIEAFDPDSSSNDKLMY-----KITSGNPQGFFSIHPKTGLITTTSRKLDREQQDEHILE 1214

Query: 216  VVATDTGNPPR 226
            V  TD G+PP+
Sbjct: 1215 VTVTDNGSPPK 1225



 Score = 41.6 bits (96), Expect = 0.68,   Method: Compositional matrix adjust.
 Identities = 56/195 (28%), Positives = 86/195 (44%), Gaps = 20/195 (10%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTTNKPRDL----RVKYWLSNDYGERFSI-SRQGDIS 98
            +F +  Y V   E+  V+  ++ V     +DL     V Y +  D  + FSI S  G ++
Sbjct: 821  EFLQESYFVEVSEDKEVHSEIIQVEATD-KDLGPNGHVTYSILTD-TDTFSIDSVTGVVN 878

Query: 99   LMQCLDYETEDSYRFTVYATDTL-----MTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
            + + LD E +  +   + A D       + ++  V +S+ +VND  P F  P Y + +  
Sbjct: 879  IARPLDRELQHEHSLKIEARDQAREEPQLFSTVVVKVSLEDVNDNPPTFIPPNYRVKVRE 938

Query: 154  IPLADLTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSIND-SGHISIV-DLSALNT 209
                DL  G+VI  +EA D D G   +V  SL    E  F ++  SG + IV  L     
Sbjct: 939  ----DLPEGTVIMWLEAHDPDLGQSGQVRYSLLDHGEGNFDVDKLSGAVRIVQQLDFEKK 994

Query: 210  STIQLVVVATDTGNP 224
                L V A D G P
Sbjct: 995  QVYNLTVRAKDKGKP 1009



 Score = 38.1 bits (87), Expect = 7.2,   Method: Compositional matrix adjust.
 Identities = 42/162 (25%), Positives = 72/162 (44%), Gaps = 14/162 (8%)

Query: 45   FSKNEYSVSALENLPVNY-VLLTVTTNKPRDLRVKYWL-----SNDYGERFSISRQGDIS 98
            FS+  YSV   EN PV + VL  V T++        +       ND  + F ++ QG + 
Sbjct: 3443 FSRGNYSVIIQENKPVGFSVLQLVVTDEDSSHNGPPFFFTIVTGNDE-KAFEVNPQGVLL 3501

Query: 99   LMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIP 155
                +  + +D Y   V   D     +++   ++I V+  + + P       E+F+    
Sbjct: 3502 TSSAIKRKEKDHYLLQVKVADNGKPQLSSLTYIDIRVIEESIYPPAIL--PLEIFI--TA 3557

Query: 156  LADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSG 197
              +   G VIGK+ A D D  D +T SL    + +FS++ +G
Sbjct: 3558 SGEEYSGGVIGKIHATDQDVYDTLTYSLDPQMDNLFSVSSTG 3599



 Score = 37.7 bits (86), Expect = 8.6,   Method: Compositional matrix adjust.
 Identities = 40/129 (31%), Positives = 57/129 (44%), Gaps = 14/129 (10%)

Query: 92   SRQGDISLMQCLDYETEDSYRFTVYATDTLMTTSAT---VNISVVNVNDWDPRFRYPQYE 148
            S  G ISL++ LDYE    +   V A D  M T ++   V + V ++ND  P F    YE
Sbjct: 2340 SSTGLISLLRTLDYEQSRQHTIFVRAVDGGMPTLSSDVIVTVDVTDLNDNPPLFEQQIYE 2399

Query: 149  LFL-PHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSINDSGHISIVDL 204
              +  H P      G  +  V+A D D  D   L    L G   K F I+ +    I+ L
Sbjct: 2400 ARISEHAP-----HGHFVTCVKAYDADSSDIDKLQYSILSGNDHKHFVIDSA--TGIITL 2452

Query: 205  SALNTSTIQ 213
            S L+   ++
Sbjct: 2453 SNLHRHALK 2461


>gi|432857205|ref|XP_004068581.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 2-like
           [Oryzias latipes]
          Length = 2980

 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 67/229 (29%), Positives = 107/229 (46%), Gaps = 24/229 (10%)

Query: 15  VRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTT---NK 71
           V A+ + +  R A+ATL V+ + T+  +  F + +Y  S  ENL + Y +LTV     + 
Sbjct: 341 VTAVDHGSPRRTAMATLTVTVSDTNDHDPVFEQQDYKESIRENLEIGYEVLTVRATDGDA 400

Query: 72  PRDLRVKYWLSNDYGER--FSI-SRQGDISLMQCLDYETEDSYRFTVYATDTL-----MT 123
           P +  + Y + N  G    F I SR G I     +D E  ++Y   V A D        +
Sbjct: 401 PANGNILYHILNSNGSNDVFEIDSRSGVIRTKGLVDREELEAYFLLVEANDQGRDPGPRS 460

Query: 124 TSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS- 182
            +ATV+I V + ND  P+F   +Y + +P     D TP + I ++ A D D+G    +  
Sbjct: 461 ATATVHILVEDDNDNAPQFSEKRYVVQIPE----DKTPNTEILQLTATDKDRGSNAVVHF 516

Query: 183 --LRGPYEKMFSIN-DSGHISIV---DLSALNTSTIQLVVVATDTGNPP 225
             + G     F I+  +G + +V   D  A    T++  + A D G PP
Sbjct: 517 SIMSGNTRGQFYIDAQTGKMDLVSYLDYEANKEYTLR--IRAQDGGRPP 563



 Score = 48.1 bits (113), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 47/170 (27%), Positives = 80/170 (47%), Gaps = 13/170 (7%)

Query: 45  FSKNEYSVSALENLPVNYVLL---TVTTNKPRDLRVKYWLSNDYGER-FSISRQ-GDISL 99
           F    +  + LEN+P+ Y ++    V  +   + R++Y L+       FSI+   G I +
Sbjct: 585 FVSTPFQATVLENVPLGYSIIHIQAVDADSGENSRLEYQLTETTPHFPFSINNSTGWIVV 644

Query: 100 MQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
              LD E+ D Y F V A D    +M++SA++++++++VND +P F    Y + L     
Sbjct: 645 AAELDRESVDFYNFGVEARDHGYPVMSSSASISMTILDVNDNNPEFTQKAYYMRLNE--- 701

Query: 157 ADLTPGSVIGKVEAADGDKGDRVTLSL-RGPYEKMFSINDSGHISIVDLS 205
            D   G+ +  V A D D    VT  +  G     FSI       ++ L+
Sbjct: 702 -DAAVGTSVVTVSAVDQDINSVVTYQISSGNTRNRFSITSQSGGGLITLA 750



 Score = 45.1 bits (105), Expect = 0.059,   Method: Compositional matrix adjust.
 Identities = 49/192 (25%), Positives = 90/192 (46%), Gaps = 20/192 (10%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKP---RDLRVKYWL-SNDYGERFSIS-RQGDISL 99
            F K+E+ +   EN P+  V+  ++   P    + ++ Y +   +  E F +    G+++ 
Sbjct: 1001 FEKDEFDIMVEENSPIGLVVGHISATDPDEGSNAQIMYQIVEGNIPEVFMLDIFSGELTA 1060

Query: 100  MQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADL 159
            +  LDYE+   Y   V AT   + + ATV+I +V+ ND  P  +  Q  +F  ++     
Sbjct: 1061 LIDLDYESRPEYVIVVQATSAPLVSRATVHIKLVDKNDNLPMLKNFQI-IFNNYVTDKSS 1119

Query: 160  T-PGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSGHISIVDLSALNTSTIQLVVVA 218
            + P  VIG++ A D D  D++  S        F + +      ++L  LN ST ++ +  
Sbjct: 1120 SFPTEVIGRIPAHDPDVSDQLHYS--------FDVGNE-----LNLVLLNQSTGEIQLSQ 1166

Query: 219  TDTGNPPRQASV 230
                N P +AS+
Sbjct: 1167 ALNNNRPLEASM 1178



 Score = 44.7 bits (104), Expect = 0.077,   Method: Compositional matrix adjust.
 Identities = 41/142 (28%), Positives = 65/142 (45%), Gaps = 15/142 (10%)

Query: 44  QFSKNEYSVSALENLPVNYV---LLTVTTNKPRDLRVKYWLSNDYGER----FSIS-RQG 95
           QF    Y VS  EN P       L  V  ++    R++Y++   +  R    F++    G
Sbjct: 262 QFQPPMYQVSVAENQPAGTAVVQLKAVDVDEGDAGRLEYFIEALFDSRSNNLFAVDPASG 321

Query: 96  DISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLP 152
            ++ ++ LD ET+D++ F V A D      T  AT+ ++V + ND DP F    Y+  + 
Sbjct: 322 AVTTVEVLDRETKDTHVFRVTAVDHGSPRRTAMATLTVTVSDTNDHDPVFEQQDYKESIR 381

Query: 153 HIPLADLTPGSVIGKVEAADGD 174
                +L  G  +  V A DGD
Sbjct: 382 E----NLEIGYEVLTVRATDGD 399



 Score = 42.7 bits (99), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 49/191 (25%), Positives = 92/191 (48%), Gaps = 12/191 (6%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTT-NKPRDLRVKYWLSN-DYGERFSISRQ---GDIS 98
           +F++  Y +   E+  V   ++TV+  ++  +  V Y +S+ +   RFSI+ Q   G I+
Sbjct: 689 EFTQKAYYMRLNEDAAVGTSVVTVSAVDQDINSVVTYQISSGNTRNRFSITSQSGGGLIT 748

Query: 99  LMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLAD 158
           L   LDY+ E  Y  TV A+D  +  +A V ++V + N   P F+   Y + +      D
Sbjct: 749 LALPLDYKLERQYVLTVTASDGTLFDTAQVYVNVTDANTHRPVFQSSHYTVNINE----D 804

Query: 159 LTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSINDSGHISI-VDLSALNTSTIQLV 215
              G+ +  + A D D G+  R+T  +     +    +D+G ++  ++L   +  +  L 
Sbjct: 805 RPLGTTVVVISATDEDIGENARITYFMDDNVPQFDIDSDTGAVTTQMELDYEDQLSYTLA 864

Query: 216 VVATDTGNPPR 226
           + A D G P +
Sbjct: 865 ITARDNGIPQK 875


>gi|162417991|ref|NP_001104793.1| protocadherin Fat 3 precursor [Gallus gallus]
          Length = 4557

 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 63/197 (31%), Positives = 92/197 (46%), Gaps = 17/197 (8%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPR---DLRVKYWLSNDYGERFSISRQ-GDISLM 100
            FS + Y+    EN     +L  V    P    + +V Y L++     FS+ R  G I L 
Sbjct: 3132 FSSDHYTACVYENTATKALLTRVQATDPDVGVNRKVTYSLADSADGYFSVDRSSGIIILE 3191

Query: 101  QCLDYETEDSYRFTVYATDT----LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
              LD E + SY  +V A+D      +++ ATV I+V+++ND  P F    Y + +P    
Sbjct: 3192 HPLDRELQSSYNISVKASDQSIVLTLSSFATVTITVLDINDNPPVFERRDYLVTVPE--- 3248

Query: 157  ADLTPGSVIGKVEAADGDKGD--RVTLSLRGPYEK-MFSIND-SGHISIVD-LSALNTST 211
             D +PG+ +  V A   D G    +T  +R   EK  F+IN  +G ISI + L   +   
Sbjct: 3249 -DTSPGTEVLSVFATSQDIGTNAEITYLIRSGNEKGKFNINSKTGAISISESLDYESCKD 3307

Query: 212  IQLVVVATDTGNPPRQA 228
              LVV A D G P   A
Sbjct: 3308 FYLVVEAKDGGTPALSA 3324



 Score = 55.8 bits (133), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 66/204 (32%), Positives = 95/204 (46%), Gaps = 25/204 (12%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDL----RVKYWLSNDYGERFSISR-QGDISL 99
            F  + Y+V  LE+LPV  V+  + T+ P DL    +V+Y L NDY  RF I +  G I L
Sbjct: 937  FIPSSYNVKVLEDLPVGTVIAWLETHDP-DLGLGGQVRYSLVNDYNGRFEIDKASGAIRL 995

Query: 100  MQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIP---- 155
             + LDYE +  Y  TV A D          +S+ +V+  +         L+ P+ P    
Sbjct: 996  SKELDYEKQQFYNLTVRAKDKGRP------VSLSSVSFVEVEVVDVNENLYTPYFPDFAV 1049

Query: 156  LADLTPGSVIG----KVEAADGDKG--DRVTLSLR-GPYEKMFSIN-DSGHISIVD-LSA 206
            +  +   S IG    +V A D D G    +  S+R G     FSI+ ++G I   D L  
Sbjct: 1050 IGSVKENSRIGTSVLQVVARDEDSGRDGEIQYSIRDGSGLGRFSIDEETGVIYTADVLDR 1109

Query: 207  LNTSTIQLVVVATDTGNPPRQASV 230
              T +  L V ATD G  P  A++
Sbjct: 1110 ETTKSYWLTVYATDHGVVPLYATI 1133



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 43/137 (31%), Positives = 60/137 (43%), Gaps = 8/137 (5%)

Query: 103  LDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPG 162
            LD E +D Y   + ATD L  T A V ++V +VND  P      Y    P     D+   
Sbjct: 2991 LDREEQDVYYLNITATDGLFVTQAAVEVTVTDVNDNSPVCEQVAYTALFPE----DIPSN 3046

Query: 163  SVIGKVEAADGDKGDR--VTLSLRGPYEKMFSIN-DSGHI-SIVDLSALNTSTIQLVVVA 218
             VI K+ A D D G    +  SL GP    F ++ ++G + S+  L         LV  A
Sbjct: 3047 KVILKISAKDADIGSNGDIRYSLYGPGNNKFFLDPENGELKSLAPLDREKIPVYNLVARA 3106

Query: 219  TDTGNPPRQASVPAIMH 235
            TD G    Q+ +  I+ 
Sbjct: 3107 TDGGGRFCQSEIHLILE 3123



 Score = 47.0 bits (110), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 56/202 (27%), Positives = 88/202 (43%), Gaps = 25/202 (12%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWL-SNDYGERFSIS-RQGDISLMQC 102
            F K  Y+ S  E++ ++  +L++    P    + Y +   D   +F+I    G +S++  
Sbjct: 2187 FDKPFYTASVNEDVEIHTPILSINATSPEGQGIIYIIVEGDPHNQFNIDFDTGVLSVISP 2246

Query: 103  LDYETEDSYRFTVYATDTLMTTSATVNISVV--NVNDWDPRFRYPQYELFLPHIPLADLT 160
            LDYE    ++  V A+D L    A V + +V  +VND  P F    Y         A L+
Sbjct: 2247 LDYEINSLFKLMVRASDALTGARAEVTVDLVINDVNDNPPVFDQSAYN--------ATLS 2298

Query: 161  PGSVIG----KVEAADGDKGDRVTLSLRGPYEKMFSINDSGHIS-----IVDLSALNTST 211
              S+IG    +V A D D  +   +  +   +  F+  D  HI      I+    L+   
Sbjct: 2299 EASLIGTPVLQVVATDADSDNNKIVQYQ-IVQDTFNSTDYFHIDSTSGLILTARMLDHEL 2357

Query: 212  IQ---LVVVATDTGNPPRQASV 230
            IQ   L V ATD G PP  + V
Sbjct: 2358 IQQCSLKVRATDNGFPPLSSEV 2379



 Score = 47.0 bits (110), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 59/195 (30%), Positives = 88/195 (45%), Gaps = 15/195 (7%)

Query: 43  LQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYG-ERFSISR-QGDISLM 100
           L+F K  Y VS  E  P   V++ V    P  L V+Y +S   G E F I+   G I+  
Sbjct: 374 LKFEKEAYDVSVSEFSPPG-VVVAVVKLMPEPLGVEYRISPSEGAENFKINPITGLITTA 432

Query: 101 QCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFL-PHIPLADL 159
           + L    +D Y   VY T+      A V I + + ND  P F+   Y  F+   +P+   
Sbjct: 433 RSLKIIEKDLYELEVY-TNKGDDLKAQVTIRLEDANDHTPEFQQTSYSSFVNESVPV--- 488

Query: 160 TPGSVIGKVEAADGDKGDR--VTLSLRGPYEKMFSIND-SGHISIVDLSALNTS--TIQL 214
             G  +  V A D D+G+   +T S+       F IN  +G IS  +     +S  + + 
Sbjct: 489 --GFSVLAVSAVDKDRGENGYITYSIASLNSLPFIINQFTGVISTSEELDFESSPESYRF 546

Query: 215 VVVATDTGNPPRQAS 229
           +V A+D G+P R  S
Sbjct: 547 IVRASDWGSPYRHES 561



 Score = 45.4 bits (106), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 54/203 (26%), Positives = 90/203 (44%), Gaps = 21/203 (10%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGERFSIS-RQGDISLMQC 102
            +F+  EY     EN+ +   +++++      L  +    N  G  F+I+   G I+  + 
Sbjct: 1671 KFTLKEYQAEVNENVDIGTSVISLSAISQSTLVYEIKDGNVDG-LFTINPYSGVITSQKA 1729

Query: 103  LDYETEDSYRFTVYATDTL-MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTP 161
            LDYE    Y+ TV AT+   M ++ATVNI +V+ ND  P F + QY        +++  P
Sbjct: 1730 LDYEHASFYQLTVQATNMAGMASNATVNIQIVDENDNPPVFLFSQYSG-----SISEAAP 1784

Query: 162  GSVIGK--------VEAADGDKGDRVTLS---LRGPYEKMFSINDS-GHI-SIVDLSALN 208
             + I +        + A D D      L    +    +K F+++ S G I +I +L    
Sbjct: 1785 INSIVRSTNNSPLVIRATDADSNQNALLVYQIVESTAKKYFTVDSSTGAIRTIANLDHET 1844

Query: 209  TSTIQLVVVATDTGNPPRQASVP 231
             +     V   D+GNP   A  P
Sbjct: 1845 IAHFHFHVHVRDSGNPQLTAESP 1867



 Score = 45.4 bits (106), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 53/197 (26%), Positives = 91/197 (46%), Gaps = 13/197 (6%)

Query: 45   FSKNEYSVSALENL-PVNYVLLTVTTNKP--RDLRVKYWL-SNDYGERFSI-SRQGDISL 99
            F + +Y V+  E+  P   VL    T++    +  + Y + S +   +F+I S+ G IS+
Sbjct: 3237 FERRDYLVTVPEDTSPGTEVLSVFATSQDIGTNAEITYLIRSGNEKGKFNINSKTGAISI 3296

Query: 100  MQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
             + LDYE+   +   V A D     ++   TVN++V +VND  P+F    Y   +     
Sbjct: 3297 SESLDYESCKDFYLVVEAKDGGTPALSAVTTVNVNVTDVNDNAPKFSQVVYSAVISED-- 3354

Query: 157  ADLTPGSVIGKVEAADGDKGDRVTLSL-RGPYEKMFSIN-DSGHISI-VDLSALNTSTIQ 213
            A +    ++   E  D     ++  S+  G  +  FS++  SG + +   L     S   
Sbjct: 3355 AAIGDSVIMLIAEDLDSPSNGQIHFSIVSGDQDNEFSVDPGSGLVKVKKKLDRERISGYS 3414

Query: 214  LVVVATDTGNPPRQASV 230
            LV+ A D+G PP  +SV
Sbjct: 3415 LVIQARDSGTPPLSSSV 3431



 Score = 44.3 bits (103), Expect = 0.094,   Method: Compositional matrix adjust.
 Identities = 73/233 (31%), Positives = 105/233 (45%), Gaps = 31/233 (13%)

Query: 27   ALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLR--VKYWLSND 84
            A+ T++V +A  S   L F++N YS S  EN   N   + V       L   +KY + N 
Sbjct: 1967 AMVTIMVKEAMDS--GLHFTQNFYSTSISENT-TNITKIAVVNAVGNRLNEPLKYSILNP 2023

Query: 85   YGERFSI-SRQGDISLMQ-CLDYETEDSYRFTVYAT---DTLMTTSATVNISVVNVNDWD 139
             G +F I S  G I       D E ++ Y   V A+   D L      V + + ++ND  
Sbjct: 2024 -GNKFKIKSTSGVIQTTGISFDREEQELYELVVEASRELDHLRVARVVVRVYIEDINDNA 2082

Query: 140  PRFRYPQYELFLPHIPLA--DLTPGSVIGKVEAADGDKGDR--VTLSLRGPYEKMFSIND 195
            P F      + LP+      D  PG++I +V A D DK +   V+  L+  Y   F I D
Sbjct: 2083 PVF------VGLPYYAAVQVDAEPGTLIYRVTAIDKDKDENGDVSYLLKEDY-GHFEI-D 2134

Query: 196  SGHISIVDLSALNT--STIQ--LVVVATDTGNPPRQASVPAIMHFPEAIVQQA 244
             G  S+    A N+  S I+  +V++A D GNP   ASV      P  IV +A
Sbjct: 2135 RGTGSVTLKEAFNSDLSNIEYLVVILAKDGGNPSLSASV----ELPITIVNKA 2183



 Score = 42.7 bits (99), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 35/144 (24%), Positives = 69/144 (47%), Gaps = 7/144 (4%)

Query: 43   LQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKY-WLSNDYGERFSISRQ-GDISLM 100
            L F +  Y+ + +E+  V  ++  V+  +P ++ + +  +  +Y   F   +  G I + 
Sbjct: 1361 LTFDEPFYNFTVMESDKVTEIVGVVSV-QPSNIPLWFDIVGGNYDSSFDAEKGVGTIVIA 1419

Query: 101  QCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLT 160
            + LD E    Y  TV  TD     +  V I V++ ND  P F  P Y++ +      D+ 
Sbjct: 1420 KPLDAEQRSIYNMTVEVTDGTNVATTQVFIKVLDNNDNGPEFSQPSYDVTISE----DIL 1475

Query: 161  PGSVIGKVEAADGDKGDRVTLSLR 184
            P + I ++EA D D+  +++ ++ 
Sbjct: 1476 PDTEILQIEAIDRDEKHKLSYTIH 1499



 Score = 42.7 bits (99), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 41/146 (28%), Positives = 71/146 (48%), Gaps = 17/146 (11%)

Query: 45   FSKNEYSVSALENLPVNYVLL---TVTTNKPRDLRVKYWLS-----NDYGERFSI-SRQG 95
            F    Y    +E +P+   L+    V  +   + +V Y L+         E F+I S  G
Sbjct: 2815 FETASYDAIIMEGMPIGTKLMQVKAVDADSSANGQVTYTLAVESELEKITEAFTIDSNSG 2874

Query: 96   DISLMQCLDYETEDSYRFTVYATD---TLMTTSAT-VNISVVNVNDWDPRFRYPQYELFL 151
             IS ++ LD+E + ++ F V A+D   TL  +S T V+++V ++ND  P F   ++E++ 
Sbjct: 2875 WISTLKDLDHEKDPTFTFAVVASDLGETLSLSSTTLVSVAVTDINDNAPVF---EHEVYR 2931

Query: 152  PHIPLADLTPGSVIGKVEAADGDKGD 177
              +  +D  PG V+  +   D D  D
Sbjct: 2932 GSVKESD-PPGEVVAVLSTWDEDTSD 2956



 Score = 40.8 bits (94), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 42/155 (27%), Positives = 69/155 (44%), Gaps = 12/155 (7%)

Query: 76   RVKYWL--SNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVV 133
            R++Y +   ND       S+ G I+L        E  Y   V  +D L T++A V+I ++
Sbjct: 2429 RLEYSILSGNDRTSFIMDSKSGVITLSNHRKQRMEPMYSLNVSVSDGLFTSTAQVHIQIL 2488

Query: 134  NVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEK-M 190
              N + P F    Y   +      +  PG+ +  V+A DGD G   +++ S+   + K  
Sbjct: 2489 GANLYSPVFSQSVYVAEVRE----NAAPGTKVLHVKATDGDSGVYGQISYSIINDFAKDR 2544

Query: 191  FSINDSGHI---SIVDLSALNTSTIQLVVVATDTG 222
            F I+ +G I     +D   L  S I + + A D G
Sbjct: 2545 FLIDSNGQILTTERLDRENLLESDIGIFLRALDGG 2579



 Score = 39.7 bits (91), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 43/130 (33%), Positives = 59/130 (45%), Gaps = 12/130 (9%)

Query: 73   RDLRVKYWLSNDYG-ERFSISRQ-GDISLMQCLDYETEDSYRFTVYATD---TLMTTSAT 127
            RD  ++Y + +  G  RFSI  + G I     LD ET  SY  TVYATD     +  +  
Sbjct: 1075 RDGEIQYSIRDGSGLGRFSIDEETGVIYTADVLDRETTKSYWLTVYATDHGVVPLYATIE 1134

Query: 128  VNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR--- 184
            V I V +VND  P    P   ++ P +        SVI +++A D D      L+ R   
Sbjct: 1135 VYIEVEDVNDNAPLTSEP---IYYPSVMENSPKDVSVI-QIQAQDPDSSTNEKLAYRITS 1190

Query: 185  GPYEKMFSIN 194
            G  +  F IN
Sbjct: 1191 GNPQNFFVIN 1200


>gi|47216287|emb|CAF96583.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 3280

 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 54/178 (30%), Positives = 85/178 (47%), Gaps = 13/178 (7%)

Query: 56   ENLPVNYVLLTVTTNK---PRDLRVKYWLSNDYGERFSISR-QGDISLMQCLDYETEDSY 111
            EN P  + +  VT N       +R     ++  G  F+I++  G +SL + LDYE +  Y
Sbjct: 2291 ENRPAGHTVTQVTANDVDLSSTIRYSLSGNSSLGSPFAINQYTGVVSLTRALDYEEQAEY 2350

Query: 112  RFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAA 171
              TV A+D+L  TS  V + V+++ND  P F    Y++ L  +  AD    +++  V A 
Sbjct: 2351 TLTVLASDSLHQTSGEVKVQVLDLNDNAPVFSEDSYQVDLSELATAD----TLVLSVSAT 2406

Query: 172  DGDKGDRVTLSLR---GPYEKMFSINDSGHISIVD--LSALNTSTIQLVVVATDTGNP 224
            D D G    ++ R    P +  +   DSG I       +  N + I L+V A D G+P
Sbjct: 2407 DRDSGPNGEITYRLLSSPLQGFYIQADSGAIFTNKPIKATANGNLIHLLVEAKDGGDP 2464



 Score = 54.3 bits (129), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 51/163 (31%), Positives = 70/163 (42%), Gaps = 21/163 (12%)

Query: 21   DNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYW 80
            DN   +  +T+  S     L  L    +  SV A++N   +Y  LT +   P       +
Sbjct: 2705 DNSPHFVFSTVNCSV----LENLPAFTHTCSVHAVDNDLGSYGQLTYSILSP------CF 2754

Query: 81   LSNDYG-----ERFSISR-QGDISLMQCLDYETEDSYRFTVYATDT-LMTTSATVNISVV 133
            L  D G     E F+I    GD+   Q  DYE E  Y F V A D    T +  V +S+ 
Sbjct: 2755 LDYDSGSPEKKEAFAIDPLTGDVHTRQTFDYERESEYCFVVEARDKGGKTATVRVQVSIR 2814

Query: 134  NVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG 176
             V+++ P F   QY   LP        PG V+G V A D D+G
Sbjct: 2815 GVDEFSPIFTQKQYHFLLP----GHSKPGDVVGFVMAMDHDRG 2853



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 57/203 (28%), Positives = 87/203 (42%), Gaps = 15/203 (7%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWLSNDYGE-RFSI-SRQGDISL 99
            FS+  Y  S  E LP    +L V+   P +    RV Y L+ D  +  FS+ S  G I  
Sbjct: 1866 FSRKSYQASVSEGLPPGAEVLRVSAFDPDEGPNGRVTYSLTEDSSQGAFSVDSLTGVIRT 1925

Query: 100  MQCLDYETEDSYRFTVYATDTL----MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIP 155
               LD E+   Y     ATD      +T+ A+V + V +VND  P         ++    
Sbjct: 1926 TGPLDRESRAQYTLRAVATDGCTQGPLTSVASVTVQVEDVNDNVPICDQNPVNAWVS--- 1982

Query: 156  LADLTPGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSIN-DSGHISIVDLSALNTSTIQ 213
             A   P  ++  V A D D+G+  T+       E +F IN ++G IS+        S  +
Sbjct: 1983 -ARTLPNQIVATVTAEDSDQGENGTIQFALSDEENLFDINRETGEISVRRRVRAGFSGRK 2041

Query: 214  LVVVATDTGNPPRQASVPAIMHF 236
            L V+ +D G P   ++    +H 
Sbjct: 2042 LEVMVSDRGRPVLTSTCLVFIHL 2064



 Score = 43.5 bits (101), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 52/186 (27%), Positives = 77/186 (41%), Gaps = 49/186 (26%)

Query: 97   ISLMQCLDYETEDSYRFTVYATDT-----LMTTSATVNISVVNVNDWDPRFRYPQYELFL 151
            + L   LDYET+ ++RF V A+         T +A V +SV++VND  P F    Y   +
Sbjct: 1023 VVLAHSLDYETQSAFRFRVLASAAEPSLANTTATAAVTVSVLDVNDNAPVFSRDLYYFTV 1082

Query: 152  PHIPLADLTPGSVIGKVEAADGDKGDRVTLSL----------------RGPYE-KMFS-- 192
               P    +P  ++G V AAD D G    LS                 + P++ + FS  
Sbjct: 1083 SEAP----SPQGLVGTVSAADKDSGRNAQLSYILLSDGKFFRINAKTGQSPWQLRCFSVA 1138

Query: 193  -------INDSGH-ISIVDLSALNTSTIQLVVVATDTGNPPRQASV-------------P 231
                   ++ SG  I+ V L+  + S   L V+ TD G+P   A+              P
Sbjct: 1139 WMRPNALVSPSGEIINWVALNREHHSQHTLKVMVTDQGHPRLNATATVHILVTDTNDNTP 1198

Query: 232  AIMHFP 237
              MH P
Sbjct: 1199 QFMHLP 1204



 Score = 43.1 bits (100), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 43/152 (28%), Positives = 69/152 (45%), Gaps = 25/152 (16%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTN----KPRDLRVKYWLSNDYGER--------FSIS 92
            F +  YS++  E+ P +  LLT++       P +  + Y ++    ER          I 
Sbjct: 2486 FHQEVYSLTIPEDTPTDATLLTLSAEDQDWSPANTHLDYAITQGNEERRFCLEVRLVPIE 2545

Query: 93   RQ----GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYP 145
             Q    G + L   LD ET DSY  TV  +D     + +SA V ++V + ND  P F   
Sbjct: 2546 NQWRNVGKLVLCNALDRETTDSYVLTVSVSDRGDPPLNSSAVVMLTVADRNDNAPVFSST 2605

Query: 146  QYELFLPHIPLADLTP-GSVIGKVEAADGDKG 176
            +Y     H  +++ +P G+ + +V A D D G
Sbjct: 2606 EY-----HAQVSESSPRGTRLVQVSARDPDLG 2632



 Score = 42.7 bits (99), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 57/217 (26%), Positives = 98/217 (45%), Gaps = 29/217 (13%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRDL----RVKYWLS---NDYGERFSISR-QGD 96
           F++ EY  S  E+ P+   +  V      DL    R+ Y ++   +D    FSI+R  G 
Sbjct: 231 FNQTEYHASVPEDAPLMSPVCQVHATD-LDLGDNGRITYEINRRQSDPDRVFSINRTSGV 289

Query: 97  ISLMQCLDYETEDSYRFTVYATDTLMT---TSATVNISVVNVNDWDPRFRYPQYELFLPH 153
           + + + LDYE +  +   V ATD       +S  V + V+N+ND  P        LFL  
Sbjct: 290 VYVNKPLDYEAQAFHELIVSATDNGAQPEHSSTFVGVRVLNINDHSPSISV----LFLSE 345

Query: 154 IPLADLTP----GSVIGKVEAADGD-KGDRVTLSLRGPYEKMFSINDSG------HISIV 202
              A ++     G  + ++  +D D + +RV ++L G   K F++  +       ++S  
Sbjct: 346 TGDAAVSEAAGLGDFVARISVSDPDFQEERVAVTLEGDDGK-FTLKQTADFLYALYVS-A 403

Query: 203 DLSALNTSTIQLVVVATDTGNPPRQASVPAIMHFPEA 239
           DL        +L V A+D G+PP  + V  ++   +A
Sbjct: 404 DLDREEKDLYELKVRASDLGSPPLSSEVVFLLRVTDA 440



 Score = 40.8 bits (94), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 50/200 (25%), Positives = 79/200 (39%), Gaps = 27/200 (13%)

Query: 43   LQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLR---VKYWLSNDYGERFSISRQ-GDIS 98
            LQF+   Y+ +  EN     ++  V  +     R   V    S +    FSI+   G+I 
Sbjct: 2071 LQFTNKVYNATIKENSGAGILVTKVEASGEAGSRQSVVYTIFSGNENSLFSINHHTGEIR 2130

Query: 99   LMQ--CLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
            + +   LD+E        V A + L TT   V+I +++VND  PRF    Y   +     
Sbjct: 2131 VQKDYALDFELSPHIHLVVLADNGLQTTHCRVSIHLLDVNDNAPRFERSSYRTAV----W 2186

Query: 157  ADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSGHISIVD-----------LS 205
                  + + ++ A+D D G      + G  E      D     I+D           L 
Sbjct: 2187 EGQAHNTYVMQMFASDADSG------INGQIEYSIVSGDPNEAFILDSVRGILATSIPLD 2240

Query: 206  ALNTSTIQLVVVATDTGNPP 225
               T + +LV+ A D G+PP
Sbjct: 2241 REITPSYKLVLQAADQGDPP 2260



 Score = 40.8 bits (94), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 50/177 (28%), Positives = 79/177 (44%), Gaps = 13/177 (7%)

Query: 13   LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENL-PVNYVLLTVTTNK 71
            L+V A+ +      +  T  V  A  + +   FS++ Y+ S  EN  P   V     T+ 
Sbjct: 1625 LIVEAVDHGLPSLSSTQTFTVEVADVNDQPPVFSQSVYNASVAENKDPGEPVARVSATDG 1684

Query: 72   PRDLRVKYWLSNDYG---ERFSISRQ-GDISLMQCLDYETEDSYRFTVYATDT---LMTT 124
              +     W S   G   E FSI+   G I+    LD E +  +   V A D+    ++ 
Sbjct: 1685 DSEENAVVWYSLLPGPGYELFSINPDTGLITTASYLDREQQHGFTLRVQARDSGPRPLSA 1744

Query: 125  SATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTL 181
            +ATV  SV++ ND  P F    + + LP     +L PG+ I   +A+D D G+  T+
Sbjct: 1745 TATVLCSVLDDNDNPPAFMQSSFRISLPE----NLPPGA-IHTAQASDPDLGENGTI 1796



 Score = 40.0 bits (92), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 40/139 (28%), Positives = 68/139 (48%), Gaps = 12/139 (8%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGERF-SIS-RQGDIS 98
           QF K+ Y+VS  E++P    L+ +     ++  +  V+Y +     +R  SI    G ++
Sbjct: 446 QFEKDAYTVSVPEDVPQGSSLIQLQARDADEGPNGAVRYSILRSNQDRLVSIEPESGLVA 505

Query: 99  LMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIP 155
               LD E+ +   F V A D     ++++ATV + V++VND +P F   Q +L+   +P
Sbjct: 506 TAAPLDRESLEQLWFLVVAADGGEPSLSSTATVTVQVLDVNDNEPVF---QRQLYGASVP 562

Query: 156 LADLTPGSVIGKVEAADGD 174
                 GS   +V A D D
Sbjct: 563 EHSAV-GSCFLQVVATDAD 580



 Score = 39.3 bits (90), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 52/192 (27%), Positives = 85/192 (44%), Gaps = 16/192 (8%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPR----DLRVKYWLSN-DYGERFSIS-RQGDIS 98
           F ++ Y+ +  E+      + TV    P        V Y +S+ D    FSI  R G IS
Sbjct: 765 FHQSRYTFTVAEDATPGTTVGTVEAVTPAAEGFSASVSYRISSGDPQGFFSIHPRSGVIS 824

Query: 99  LMQCLDYETEDSYRFTV--YATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
             + LD+E + +    +  Y+  + + ++  VNI+V +VND  P F      + +     
Sbjct: 825 STKPLDHELQPNVLLVIQSYSDASPVYSTTQVNIAVTDVNDNAPVFLRASDAVSVSQ--- 881

Query: 157 ADLTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSINDS-GHISIVD-LSALNTSTI 212
            ++ PG+V+    A D D G   RV   LR      F I+ + G ++++  L      + 
Sbjct: 882 -NVLPGTVLYIAHAHDADSGSNGRVRYRLRNDRFGTFGIDRNLGTVTLIQSLLGSRQQSY 940

Query: 213 QLVVVATDTGNP 224
            L VVA D G P
Sbjct: 941 HLEVVAEDGGEP 952


>gi|426216136|ref|XP_004002323.1| PREDICTED: LOW QUALITY PROTEIN: cadherin EGF LAG seven-pass G-type
           receptor 2, partial [Ovis aries]
          Length = 2841

 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 67/215 (31%), Positives = 99/215 (46%), Gaps = 18/215 (8%)

Query: 25  RYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWL 81
           R ALATL +    T+  +  F + EY  S  ENL V Y +LTV     + P +  + Y L
Sbjct: 266 RSALATLTILVTDTNDHDPVFEQQEYKESLRENLEVGYEVLTVRATDGDAPPNANILYRL 325

Query: 82  SNDYG----ERFSIS-RQGDISLMQCLDYETEDSYRFTVYATD-TLMTTSATVNISVVNV 135
               G    E F I  R G I     +D E  +SY+ TV A+     T +A + +SV + 
Sbjct: 326 VEGSGGSPSEVFEIDPRSGVIRTRGPVDREEVESYQLTVEASXPGPRTATAAIFLSVEDD 385

Query: 136 NDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFS 192
           ND  P+F   +Y + +      D+ PG+ + +V A+D DKG    +    + G     F 
Sbjct: 386 NDNAPQFSEKRYVVQV----REDVAPGAPVLRVTASDRDKGSNALVHYSIMSGNARGQFY 441

Query: 193 IN-DSGHISIVD-LSALNTSTIQLVVVATDTGNPP 225
           ++  +G + +V  L    T    L V A D G PP
Sbjct: 442 LDAQTGALDVVSPLDYETTKEYTLRVRAQDGGRPP 476



 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 49/171 (28%), Positives = 80/171 (46%), Gaps = 15/171 (8%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGERFSIS---RQGDIS 98
           F    +  + LE++P+ Y++L V     +   + R++Y L+   G  F  +     G IS
Sbjct: 498 FVSTPFQATVLESVPLGYLVLHVQAIDADAGDNARLEYRLAG-VGHDFPFTINNGTGWIS 556

Query: 99  LMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIP 155
           +   LD E  D Y F V A D     +T SA+V++++++VND +P F  P+Y + L    
Sbjct: 557 VAAELDREEVDFYSFGVEARDHGTPALTASASVSVTILDVNDNNPTFTQPEYTVRLNE-- 614

Query: 156 LADLTPGSVIGKVEAADGDKGDRVTLSL-RGPYEKMFSINDSGHISIVDLS 205
             D   G+ +  V A D D    +T  +  G     FSI       +V L+
Sbjct: 615 --DAAVGTSVVTVSAVDRDAHSVITYQITSGNTRNRFSITSQSGGGLVSLA 663



 Score = 45.1 bits (105), Expect = 0.056,   Method: Compositional matrix adjust.
 Identities = 51/189 (26%), Positives = 86/189 (45%), Gaps = 14/189 (7%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRDLR--VKYWL-SNDYGERFSISRQ---GDIS 98
           F++ EY+V   E+  V   ++TV+    RD    + Y + S +   RFSI+ Q   G +S
Sbjct: 603 FTQPEYTVRLNEDAAVGTSVVTVSAVD-RDAHSVITYQITSGNTRNRFSITSQSGGGLVS 661

Query: 99  LMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLAD 158
           L   LDY+ E  Y   V A+D     +A V ++V + N   P F+   Y + +      D
Sbjct: 662 LALPLDYKLERQYVLAVTASDGTRQDTAQVVVNVTDANTHRPVFQSSHYTVNINE----D 717

Query: 159 LTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSINDSGHISI-VDLSALNTSTIQLV 215
              G+ +  + A D D G+  R+T  +     +     D+G ++   +L   +  +  L 
Sbjct: 718 RPAGTTVVLISATDEDTGENARITYFMEDSIPQFRIDADTGAVTTQAELDYEDQVSYTLA 777

Query: 216 VVATDTGNP 224
           + A D G P
Sbjct: 778 ITARDNGIP 786



 Score = 44.3 bits (103), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 40/149 (26%), Positives = 69/149 (46%), Gaps = 10/149 (6%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWL-SNDYGERFSIS-RQGDISL 99
            F ++E+ V   EN P+   +  VT   P +    ++ Y +   +  E F +    G+++ 
Sbjct: 914  FEQDEFDVFVEENSPIGLAVARVTATDPDEGTNAQIMYQIVEGNIPEVFQLDIFSGELTA 973

Query: 100  MQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPH--IPLA 157
            +  LDYE    Y   + AT   + + ATV++ +++ ND  P      +E+   +     +
Sbjct: 974  LVDLDYEDRPEYVLVIQATSAPLVSRATVHVRLLDRNDNPPVLG--NFEILFNNYVTNRS 1031

Query: 158  DLTPGSVIGKVEAADGDKGDRVTLSL-RG 185
               PG  IG+V A D D  D +T S  RG
Sbjct: 1032 SSFPGGAIGRVPAHDPDISDSLTYSFERG 1060


>gi|380790103|gb|AFE66927.1| protocadherin Fat 1 precursor [Macaca mulatta]
          Length = 4588

 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 42/157 (26%), Positives = 77/157 (49%), Gaps = 11/157 (7%)

Query: 33   VSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWL---SNDYGERF 89
            +SK   S   + F ++ ++ + +E+ PV +++  ++   P    +  W      +Y   F
Sbjct: 1346 ISKPKPSPEPISFEESFFTFTVMESDPVAHMIGVISVEPPG---IPLWFDITGGNYDSHF 1402

Query: 90   SISR-QGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYE 148
             + +  G I + + LD E + +Y  TV ATD   T    V I V++ ND  P+F   +YE
Sbjct: 1403 DVDKGTGTIIVAKPLDAEQKSNYNLTVEATDGTTTILTQVFIKVIDTNDHRPQFSTSKYE 1462

Query: 149  LFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRG 185
            + +P     D  P + I  + A D D+ +R+  +L+G
Sbjct: 1463 VVIPE----DTVPETEILHISAVDQDEKNRLIYTLQG 1495



 Score = 61.6 bits (148), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 63/213 (29%), Positives = 104/213 (48%), Gaps = 18/213 (8%)

Query: 33   VSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTV-TTNKPRDL--RVKYWLSNDYG-ER 88
            V+  G +L    F +NEY V   EN P++ +++ V TT+    +   V Y + ND+  +R
Sbjct: 2480 VTVIGGNLHSPAFLQNEYEVELAENAPLHTLVMEVKTTDGDSGIYGDVTYHIVNDFAKDR 2539

Query: 89   FSISRQGDISLMQCLDYET--EDSYRFTVYATDTLMTTS-ATVNISVVNVNDWDPRFRYP 145
            F I+ +G I  ++ LD ET  E      + A D     +  TVN+ + + ND  P+FR  
Sbjct: 2540 FYINERGQIFTLEKLDRETPAEKVISVRLMAKDAGGKVAFCTVNVILTDDNDNAPQFRAT 2599

Query: 146  QYELFLPHIPLADLTPGSVIGKVEAADGDKGDR--VTLSLRGPYEKM---FSIND-SGHI 199
            +YE+ +     +    G+ + KV A+D D+G    VT ++    + +     IN  SG I
Sbjct: 2600 KYEVNIG----SSAAKGTSVIKVLASDADEGSNADVTYAIEADSDSVKENLEINKLSGVI 2655

Query: 200  SIVD-LSALNTSTIQLVVVATDTGNPPRQASVP 231
            +  + L  L        V A D G+P +++ VP
Sbjct: 2656 TTKESLIGLENEFFTFFVRAVDNGSPSKESVVP 2688



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/145 (29%), Positives = 69/145 (47%), Gaps = 8/145 (5%)

Query: 90   SISRQGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYEL 149
            +I  +  + + + LD E  D+Y  T+ ATD   ++ A V + V++ ND  P      Y  
Sbjct: 2971 NIQNEWKVYVKKPLDREKRDNYLLTITATDGTFSSKAIVEVKVLDANDNSPVCEKTLYSD 3030

Query: 150  FLPHIPLADLTPGSVIGKVEAADGD--KGDRVTLSLRGPYEKMFSIN-DSGHISI-VDLS 205
             +P     D+ PG +I ++ AAD D      +T +L G   + F +N D+G +     L 
Sbjct: 3031 TIPE----DVLPGKLIMQISAADADIRSNAEITYTLSGSGAEKFQLNPDTGELKTSAPLD 3086

Query: 206  ALNTSTIQLVVVATDTGNPPRQASV 230
                +   L+V ATD G    QAS+
Sbjct: 3087 REEQAVYHLLVRATDRGGRFCQASI 3111



 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 61/203 (30%), Positives = 96/203 (47%), Gaps = 27/203 (13%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSN-DYGERFSIS-RQGDISLMQC 102
            F K  YS    EN+ V+  ++ V  N P  L+V Y +++ D   +F+I+   G I+++  
Sbjct: 2182 FEKPFYSAEIAENVQVHSPVVHVQANSPEGLKVFYSITDGDPFSQFTINFNTGVINVIAP 2241

Query: 103  LDYETEDSYRFTVYATDTLMTTSATVNISVV--NVNDWDPRFRYPQYELFLPHIPLADLT 160
            LD+E   +Y+ ++ ATD+L    A V + ++  ++ND  P F    Y         A L+
Sbjct: 2242 LDFEAHPAYKLSIRATDSLTGAHAEVFVDIIVEDINDNAPVFAQQSY--------AATLS 2293

Query: 161  PGSVIG----KVEAADGDK--GDRVTLSLRGPYEK---MFSINDS-GHISIVDLSALNTS 210
              SVIG    +V A D D      ++  L G   K    F ++ S G IS+  L  L+  
Sbjct: 2294 EASVIGTSVVQVRATDSDSEPNRGISYQLSGNLSKSHDHFHVDSSTGLISL--LRTLDYE 2351

Query: 211  TIQ---LVVVATDTGNPPRQASV 230
              Q   + V A D G PP  + V
Sbjct: 2352 QSQRHTIFVRAVDGGMPPLSSDV 2374



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 58/244 (23%), Positives = 104/244 (42%), Gaps = 40/244 (16%)

Query: 4    EDDFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYV 63
            E++F    T  VRA+   +  + ++  + V       +  +FS+  Y+ +  E++P+   
Sbjct: 2665 ENEFF---TFFVRAVDNGSPSKESVVPVYVKILPPETQLPKFSEPFYTYTVSEDVPIGTE 2721

Query: 64   LLTVTTNKPRDLRVKYWLSN----DYGERFSISRQ-GDISLMQCLDYETEDSYRFTVYAT 118
            +  +       +       N    +  E F I RQ G + L + LD+E    Y+F++ A 
Sbjct: 2722 IDLIRAEHSGTVLYSLVKGNTPESNRDESFVIDRQSGRLKLEKSLDHEITKWYQFSILAR 2781

Query: 119  ----DTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGD 174
                D  M  S  V+I V + ND  P F    YE F+    + +L  GS + ++ A+D D
Sbjct: 2782 CTQDDREMVASVDVSIQVKDANDNSPVFESSPYEAFI----VENLPGGSRVIQIRASDAD 2837

Query: 175  KGDRVTLSLRGPYEKMFSINDSGHISIVDLSALNTST----------------IQLVVVA 218
             G    +        M+S++ S  + +++  A+N  T                 Q+ VVA
Sbjct: 2838 SGTNSQV--------MYSLDQSQSVEVIESFAINMETGWITTLKELDHEERDNYQIKVVA 2889

Query: 219  TDTG 222
            +D G
Sbjct: 2890 SDHG 2893



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 61/215 (28%), Positives = 102/215 (47%), Gaps = 21/215 (9%)

Query: 27   ALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLS---- 82
            A  T++VS    +     F   EY  +  E++ V   +L V     RD+     ++    
Sbjct: 3212 ATGTVVVSVLDINDNPPVFEYREYGATVSEDILVGTEVLQVYAAS-RDIEANAEITYSII 3270

Query: 83   --NDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVN 136
              N++G +FSI S+ G + +++ LDYE+   Y  T+ ATD     ++  ATVN++V +VN
Sbjct: 3271 SGNEHG-KFSIDSKTGAVFIIENLDYESSHEYYLTIEATDGGTPSLSDVATVNVNVTDVN 3329

Query: 137  DWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS-LRGPYEKMFSIND 195
            D  P F    Y   +    + + +  +V+   + ADG     +  S + G     F+I+ 
Sbjct: 3330 DNAPVFSQDTYTAVVSEDAVLEQSVITVLA--DDADGPSNSHIHYSIIDGNQGGPFTIDP 3387

Query: 196  -SGHISIVDLSALNTSTIQ---LVVVATDTGNPPR 226
              G + +  L  L+  TI    L V A+D G+PPR
Sbjct: 3388 VRGEVKVTKL--LDRETISGYTLTVQASDNGSPPR 3420



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 60/225 (26%), Positives = 108/225 (48%), Gaps = 19/225 (8%)

Query: 13   LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVT---T 69
            L+VRA   D   R+  A+++++    +    +FS + Y+++  EN     +L  V     
Sbjct: 3095 LLVRAT--DRGGRFCQASIVLTLEDVNDNAPEFSADPYAITVFENTEPGTLLTRVQATDA 3152

Query: 70   NKPRDLRVKYWLSNDYGERFSISR-QGDISLMQCLDYETEDSYRFTVYATDT----LMTT 124
            +   + ++ Y L +    +FSI+   G I L + LD E +  Y  ++ A D      +T 
Sbjct: 3153 DSGLNRKILYSLIDSADGQFSINELSGIIQLEKPLDRELQAVYTLSLKAVDQGLPRRLTA 3212

Query: 125  SATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAA--DGDKGDRVTLS 182
            + TV +SV+++ND  P F Y +Y   +      D+  G+ + +V AA  D +    +T S
Sbjct: 3213 TGTVVVSVLDINDNPPVFEYREYGATVSE----DILVGTEVLQVYAASRDIEANAEITYS 3268

Query: 183  -LRGPYEKMFSIND-SGHISIVD-LSALNTSTIQLVVVATDTGNP 224
             + G     FSI+  +G + I++ L   ++    L + ATD G P
Sbjct: 3269 IISGNEHGKFSIDSKTGAVFIIENLDYESSHEYYLTIEATDGGTP 3313



 Score = 45.1 bits (105), Expect = 0.060,   Method: Compositional matrix adjust.
 Identities = 55/195 (28%), Positives = 87/195 (44%), Gaps = 20/195 (10%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTTNKPRDL----RVKYWLSNDYGERFSI-SRQGDIS 98
            +F +  Y V   E+  V+  ++ V     +DL     V Y +  D  ++FSI S  G + 
Sbjct: 821  EFLQESYFVEVSEDKEVHSEIIQVEATD-KDLGPNGHVTYSILTD-TDKFSIDSATGVVK 878

Query: 99   LMQCLDYETEDSYRFTVYATDTL-----MTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
            +M  LD E +  +   + A D       + ++  + +S+ +VND  P+F  P Y + +  
Sbjct: 879  IMHPLDRELQHEHYLKIEARDQAREEPQLFSTVVLKVSLEDVNDNPPKFIPPNYRVKV-- 936

Query: 154  IPLADLTPGSVIGKVEAADGD--KGDRVTLSLRGPYEKMFSIND-SGHISIV-DLSALNT 209
                DL  G+VI  +EA D D  +  +V  SL    E  F ++  SG + IV  L     
Sbjct: 937  --REDLPEGTVIMWLEAHDPDLAQSGQVRYSLMDHGEGNFDVDKLSGAVRIVQQLDFEKK 994

Query: 210  STIQLVVVATDTGNP 224
                L V A D G P
Sbjct: 995  QVYNLTVRAKDKGKP 1009



 Score = 40.8 bits (94), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 54/215 (25%), Positives = 88/215 (40%), Gaps = 19/215 (8%)

Query: 24  DRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLR---VKYW 80
           DR A   ++V   G +    +F++  Y  +  EN+P+   +++++   P +     V Y 
Sbjct: 442 DRKASTKVLVKVLGANSNPPEFTQTAYKAAFDENVPIGTTVMSLSAVDPDEGENGYVTYS 501

Query: 81  LSNDYGERFSISR-QGDISLMQCLDYE-TEDSYRFTVYATDTLM----TTSATVNISVVN 134
           ++N     F I    G +S  + LDYE     Y   + A+D  +           I++ N
Sbjct: 502 ITNLNHVPFVIDHFTGAVSTSENLDYELMPRVYTLRIRASDWGLPYHREAEVLATITLNN 561

Query: 135 VNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYE-KMFSI 193
           +ND  P F     E  +P     DL  G  I  V A D D+   V   +    E  +FS+
Sbjct: 562 LNDNTPLFEKINCEGTIPR----DLGVGEQITTVSAIDADELQLVQYQIEAGNELDLFSL 617

Query: 194 NDSGHI-----SIVDLSALNTSTIQLVVVATDTGN 223
           N    +     S++D      S   L + ATD  N
Sbjct: 618 NPHSGVLSLKQSLMDGLGAKVSFHSLRITATDGEN 652



 Score = 40.0 bits (92), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 52/191 (27%), Positives = 86/191 (45%), Gaps = 30/191 (15%)

Query: 56   ENLPVNYVLLTVTTNKP---RDLRVKYWLSNDYG-ERFSISRQ-GDISLMQCLDYETEDS 110
            E+ PV  +++TV+ +     RD  ++Y + +  G   F I  + G I     LD E+   
Sbjct: 1045 EDTPVGSLVMTVSAHDEDAGRDGEIRYSIRDGSGVGVFKIGEETGIIETSDRLDRESTSH 1104

Query: 111  YRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSV-IG 166
            Y  TV+ATD     +++   + I V +VND  P+   P   ++ P I   + +P  V + 
Sbjct: 1105 YWLTVFATDQGVVPLSSFIEIYIEVEDVNDNAPQTSEP---VYYPEI--LENSPKDVSVV 1159

Query: 167  KVEAADGDKGDRVTLSLRGPYEKMFSINDSGHISIVDLSALNTSTIQ-----------LV 215
            ++EA D D      L  R     + S N  G  ++   + L T+T +           L 
Sbjct: 1160 QIEAFDPDLSSNDKLVYR-----ITSGNPQGFFAVHPKTGLITTTSRKLDREQQDEHILE 1214

Query: 216  VVATDTGNPPR 226
            V  TD G+PP+
Sbjct: 1215 VTVTDNGSPPK 1225



 Score = 39.3 bits (90), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 40/161 (24%), Positives = 74/161 (45%), Gaps = 12/161 (7%)

Query: 45   FSKNEYSVSALENLPVNY-VLLTVTTNKPRDLR----VKYWLSNDYGERFSISRQGDISL 99
            FS+  YSV   EN PV + VL  V T++         V   ++ +  + F +++QG +  
Sbjct: 3440 FSRGNYSVIIQENKPVGFSVLRLVVTDEDSSHNGPPFVFTIVTGNDEKAFEVNQQGVLLT 3499

Query: 100  MQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
               +  + +D +   V   D     +++   ++I V+  + + P       E+F+     
Sbjct: 3500 ASAIKRKEKDHFLLQVKVADNGKPQLSSLTYIDIRVIEESIYPPAIL--PLEIFI--TAS 3555

Query: 157  ADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSG 197
             +   G VIGK+ A D D  D +T SL    + +FS++ +G
Sbjct: 3556 GEEYSGGVIGKIHATDQDVYDTLTYSLDPQMDNLFSVSSTG 3596



 Score = 38.9 bits (89), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 39/128 (30%), Positives = 56/128 (43%), Gaps = 21/128 (16%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDLR------------VKYWLSNDYGERFSI- 91
            F + EY+    E+  +N V+LT   N P  +R            V + +     + F+I 
Sbjct: 1765 FMQAEYTGLISESASINSVVLT-DRNVPLVIRAADADKDSNALLVYHIVEPSVHKYFAID 1823

Query: 92   SRQGDISLMQCLDYETEDSYRFTVYATDT-----LMTTSATVNISVVNVNDWDPRFRYPQ 146
            S  G I  +  LDYE   ++ FTV   D          +A V I V+++ND  P F  P 
Sbjct: 1824 SSTGAIHTVLSLDYEETSTFHFTVQVHDMGTPRLFAEYAANVTIHVIDINDCPPVFAKPL 1883

Query: 147  YE--LFLP 152
            YE  L LP
Sbjct: 1884 YEASLLLP 1891



 Score = 38.1 bits (87), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 40/129 (31%), Positives = 56/129 (43%), Gaps = 14/129 (10%)

Query: 92   SRQGDISLMQCLDYETEDSYRFTVYATDTLM---TTSATVNISVVNVNDWDPRFRYPQYE 148
            S  G ISL++ LDYE    +   V A D  M   ++   V + V ++ND  P F    YE
Sbjct: 2337 SSTGLISLLRTLDYEQSQRHTIFVRAVDGGMPPLSSDVIVTVDVTDLNDNPPLFEQQIYE 2396

Query: 149  LFL-PHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSINDSGHISIVDL 204
              +  H P      G  +  V+A D D  D   L    L G   K F I+ +    I+ L
Sbjct: 2397 ARISEHAPH-----GHFVTCVKAYDADSSDIDKLQYSILSGNDHKHFIIDSA--TGIITL 2449

Query: 205  SALNTSTIQ 213
            S L   T++
Sbjct: 2450 SNLRRHTLK 2458


>gi|444705648|gb|ELW47051.1| Protocadherin Fat 1 [Tupaia chinensis]
          Length = 4584

 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 42/156 (26%), Positives = 78/156 (50%), Gaps = 11/156 (7%)

Query: 33   VSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYW---LSNDYGERF 89
            +SK   SL  + F ++ +S + +E+ PV +++  ++   P       W   +  +Y   F
Sbjct: 1340 ISKPKPSLEPISFEESFFSFTVMESDPVAHMIGVISVEPPG---TPLWFDIIGGNYDSHF 1396

Query: 90   SISR-QGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYE 148
             + +  G I + + LD E + +Y  TV ATD   T    V I V++ ND  P+F   +YE
Sbjct: 1397 DVDKGTGTIIVAKPLDAEQKSNYNLTVEATDGTTTILTQVFIKVIDTNDHRPQFSTSKYE 1456

Query: 149  LFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR 184
            + +P     D  P + I ++ A D D+ +++  +L+
Sbjct: 1457 VVIPE----DTVPETEILQISAVDKDEKNKLIYTLQ 1488



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 64/217 (29%), Positives = 105/217 (48%), Gaps = 18/217 (8%)

Query: 29   ATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTV-TTNKPRDL--RVKYWLSNDY 85
            A + ++  G +L    F +NEY V   EN P++ +++ V  T+    +  R+ Y + ND+
Sbjct: 2470 AQVHITVIGGNLHSPVFLQNEYEVELAENAPLHTLVIEVKATDGDSGIYGRLTYRIVNDF 2529

Query: 86   G-ERFSISRQGDISLMQCLDYET--EDSYRFTVYATDTLMTTS-ATVNISVVNVNDWDPR 141
              +RF  + +G I   + LD ET  E      + A D     +  TVN+ + + ND  P+
Sbjct: 2530 AKDRFYTNERGQIFTSEKLDRETPAEKVIAVRLMAKDAGGRVAFCTVNVILTDDNDNAPQ 2589

Query: 142  FRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDR--VTLSLRGPYEKM---FSIND- 195
            FR  +YE+ +     A    G+ + KV A+D D+G    VT ++    E +     IN  
Sbjct: 2590 FRATKYEVNIG----ASAAKGTSVVKVLASDTDEGSNADVTYAIEADSESVKENLEINKL 2645

Query: 196  SGHISIVD-LSALNTSTIQLVVVATDTGNPPRQASVP 231
            SG I+  + L  L        V A D G+PP+++ VP
Sbjct: 2646 SGVITTKESLIGLENEFFTFFVRAVDNGSPPKESVVP 2682



 Score = 55.5 bits (132), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 59/201 (29%), Positives = 96/201 (47%), Gaps = 23/201 (11%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSN-DYGERFSIS-RQGDISLMQC 102
            F K  YS    EN+ ++  ++ V  N P  L+V Y +++ D   +F+I+   G I+++  
Sbjct: 2176 FEKPFYSAEIPENIQIHSPVVHVQANSPEGLKVFYSITDGDPFSQFTINFNTGVINVIAP 2235

Query: 103  LDYETEDSYRFTVYATDTLMTTSATVNISVV--NVNDWDPRFRYPQYELFLPHIPLADLT 160
            LD+E   +Y+ ++ ATD+L    A V + ++  ++ND  P F    Y         A L+
Sbjct: 2236 LDFEAHPAYKLSIRATDSLTGAHADVFVDIIVEDINDNAPVFVQQSY--------AATLS 2287

Query: 161  PGSVIG----KVEAADGDK--GDRVTLSLRGPYEK---MFSINDS-GHISIVD-LSALNT 209
              SVIG    +V A D D      ++  + G + K    F I+ S G IS+V  L     
Sbjct: 2288 EASVIGTSVIQVRATDSDSEPNRGISYQMFGNHSKSQDYFHIDSSTGLISLVRTLDYEQF 2347

Query: 210  STIQLVVVATDTGNPPRQASV 230
               ++ V A D G PP  + V
Sbjct: 2348 QQHRISVRAVDGGMPPLSSDV 2368



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 41/145 (28%), Positives = 69/145 (47%), Gaps = 8/145 (5%)

Query: 90   SISRQGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYEL 149
            ++  +  + + + LD E  D+Y  ++ ATD   ++ A V + V++ ND  P      Y  
Sbjct: 2965 NVQNEWKVYVKKPLDREKRDNYLLSITATDGTFSSKAIVEVKVLDANDNSPVCEKTLYAD 3024

Query: 150  FLPHIPLADLTPGSVIGKVEAADGD--KGDRVTLSLRGPYEKMFSIN-DSGHI-SIVDLS 205
             +P     D  PG +I +V A D D      +T +L G   + F +N D+G + ++  L 
Sbjct: 3025 TIPE----DAPPGKLIMQVSATDADIRSNAEITYTLYGSGAEKFKLNPDTGELKTLAPLD 3080

Query: 206  ALNTSTIQLVVVATDTGNPPRQASV 230
                +   LVV ATD G    QA++
Sbjct: 3081 REEQAIYNLVVKATDGGGRFCQANI 3105



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 69/265 (26%), Positives = 118/265 (44%), Gaps = 36/265 (13%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDLR----VKYWL--SNDYGERFSISRQ---- 94
            F   EY  +  E++ +   +L V     RD+     + Y +   N++G +FSI  +    
Sbjct: 3224 FEYREYGATVSEDILIGTEVLQVYAAS-RDIEANADITYSIISGNEHG-KFSIDSKTGNL 3281

Query: 95   -GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELF 150
             G I +++ LDYE+   Y  TV ATD     ++  ATV+I+V ++ND  P F    + + 
Sbjct: 3282 RGSIFIIESLDYESSHEYYLTVEATDGGTPSLSDVATVSINVTDINDNTPVFSQDTFVVS 3341

Query: 151  LPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSIND-SGHISIVDLSALN 208
               +    L    +    + ADG     +  S+  G     F+I+   G + +  L  L+
Sbjct: 3342 EDAV----LEQSVITVMADDADGPSNSHIHYSITDGNQGSPFTIDPVKGEVKVTKL--LD 3395

Query: 209  TSTIQ---LVVVATDTGNPPRQASVPAIMHFPEAIVQQASSKLNSGTSSTVLIILGVVLI 265
              TI    L V A+D GNPPR  +    +   +  V   +   + G  S ++     V  
Sbjct: 3396 RETISGYTLTVQASDNGNPPRVNTTTVNIDVSD--VNDNAPVFSQGNYSVIIQENKPV-- 3451

Query: 266  VLGFVIILLILYIHKNKHTKNNGPP 290
              GF ++ L++    +K + +NGPP
Sbjct: 3452 --GFSVLQLVV---TDKDSSHNGPP 3471



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 57/244 (23%), Positives = 105/244 (43%), Gaps = 40/244 (16%)

Query: 4    EDDFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYV 63
            E++F    T  VRA+   +  + ++  + V      ++  +FS+  Y+ +  E++P+   
Sbjct: 2659 ENEFF---TFFVRAVDNGSPPKESVVPVYVKILPPEMQLPRFSEPFYTYTVSEDMPIGTE 2715

Query: 64   LLTVTTNKPRDLRVKYWLSN----DYGERFSISRQ-GDISLMQCLDYETEDSYRFTVYAT 118
            +  +       +       N    +  E F I RQ G + L + LD+ET   Y+F++ A 
Sbjct: 2716 IDLIRAEHTGTVLYSLVKGNTAESNRDEFFVIDRQSGRLKLEKRLDHETTKWYQFSILAR 2775

Query: 119  ----DTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGD 174
                D  +  S  V+I V + ND  P      YE F+    + +L  GS + ++ A+D D
Sbjct: 2776 CTRDDYEVVASVEVSIQVKDANDNSPLLESNPYEAFI----VENLPAGSRVIQIRASDLD 2831

Query: 175  KGDRVTLSLRGPYEKMFSINDSGHISIVDLSALNTST----------------IQLVVVA 218
             G    +        M+S++ S  + +++  A+N  T                 Q+ VVA
Sbjct: 2832 SGTNGQV--------MYSLDQSQSVDVIESFAINMETGWITTLKELDHEKRDSYQIKVVA 2883

Query: 219  TDTG 222
            +D G
Sbjct: 2884 SDHG 2887



 Score = 48.5 bits (114), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 44/142 (30%), Positives = 70/142 (49%), Gaps = 22/142 (15%)

Query: 48   NEYSVSALENLPVNYVLLTVTTNKPRDL------RVKYWL----SNDYGERFSISRQ-GD 96
            N Y    +ENLP    ++ +   +  DL      +V Y L    S D  E F+I+ + G 
Sbjct: 2806 NPYEAFIVENLPAGSRVIQI---RASDLDSGTNGQVMYSLDQSQSVDVIESFAINMETGW 2862

Query: 97   ISLMQCLDYETEDSYRFTVYATD----TLMTTSATVNISVVNVNDWDPRFRYPQYELFLP 152
            I+ ++ LD+E  DSY+  V A+D      ++++A V+++V +VND  PRF    Y+  + 
Sbjct: 2863 ITTLKELDHEKRDSYQIKVVASDHGEKVQLSSTAIVDVTVTDVNDSPPRFTAEIYKGTVS 2922

Query: 153  HIPLADLTPGSVIGKVEAADGD 174
                 D  PG VI  +   D D
Sbjct: 2923 E----DDPPGGVIAILSTTDAD 2940



 Score = 46.6 bits (109), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 63/229 (27%), Positives = 102/229 (44%), Gaps = 23/229 (10%)

Query: 13   LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKP 72
            LVV+A   D   R+  A ++++    +    +FS + Y+++  EN     +L  V     
Sbjct: 3089 LVVKAT--DGGGRFCQANIVLTLEDVNDNAPEFSADPYTITVFENTEPGTLLTRVQATDA 3146

Query: 73   R---DLRVKYWLSNDYGERFSISR-QGDISLMQCLDYETEDSYRFTVYATDT----LMTT 124
                + ++ Y L N    +FSI+   G I L + LD E +  Y  T+ A D      +T 
Sbjct: 3147 DAGLNRKISYSLINSAEGQFSINELSGIIQLEKPLDRELQAVYTLTLKAVDQGLPRRLTA 3206

Query: 125  SATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGD---KGDRVTL 181
            ++ V +SV+++ND  P F Y +Y   +      D+  G+ + +V AA  D     D    
Sbjct: 3207 TSVVVVSVLDINDNPPVFEYREYGATVSE----DILIGTEVLQVYAASRDIEANADITYS 3262

Query: 182  SLRGPYEKMFSI-----NDSGHISIVD-LSALNTSTIQLVVVATDTGNP 224
             + G     FSI     N  G I I++ L   ++    L V ATD G P
Sbjct: 3263 IISGNEHGKFSIDSKTGNLRGSIFIIESLDYESSHEYYLTVEATDGGTP 3311



 Score = 45.8 bits (107), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 58/215 (26%), Positives = 92/215 (42%), Gaps = 19/215 (8%)

Query: 24  DRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLR---VKYW 80
           DR A   ++V   GT+    +F++  Y  S  EN+P+   +++V+   P +     V Y 
Sbjct: 438 DRKASTRVLVKVLGTNSNPPEFTQTAYKASFDENVPIGTTVMSVSAVDPDEGENGYVTYS 497

Query: 81  LSNDYGERFSISR-QGDISLMQCLDYE-TEDSYRFTVYATDTLMTTSATVN----ISVVN 134
           ++N     F I    G +S  + LDYE     Y   + A+D  +     V     I++ N
Sbjct: 498 IANLNHVPFVIDHFTGAVSTSENLDYELMPRVYTLRIRASDWGLPYRREVEVLATITLNN 557

Query: 135 VNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYE-KMFSI 193
           +ND  P F     E  +P     DL  G  I  V A D D+   V   +    E ++FS+
Sbjct: 558 LNDNTPLFEKINCEGTVPR----DLGVGEQITTVSAIDADELQLVRYQIEAGNELELFSL 613

Query: 194 NDSGHI-----SIVDLSALNTSTIQLVVVATDTGN 223
           N +  +     S++D      S   L + ATD  N
Sbjct: 614 NPNSGVLSLKKSLMDGLGAKVSFHSLRITATDGEN 648



 Score = 42.7 bits (99), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 50/194 (25%), Positives = 83/194 (42%), Gaps = 12/194 (6%)

Query: 12   TLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNY-VLLTVTTN 70
            TL V+A    N  R    T+ +  +  +     FS+  YSV   EN PV + VL  V T+
Sbjct: 3403 TLTVQASDNGNPPRVNTTTVNIDVSDVNDNAPVFSQGNYSVIIQENKPVGFSVLQLVVTD 3462

Query: 71   KPRDLRVKYWL----SNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDT---LMT 123
            K        +     S +    F I++QG +     +  + +D Y   V   D     ++
Sbjct: 3463 KDSSHNGPPFFFTIVSGNEDRSFEINQQGVLLTSAAIKQKVKDHYFLHVKVADNGKPPLS 3522

Query: 124  TSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSL 183
            +   ++I V+  +   P       E+F+      +   G VIGK+ A D D  D +T SL
Sbjct: 3523 SLTYIDIRVIEESIHPPAIL--PLEIFI--TAFGEEYSGGVIGKIHATDQDVYDTLTYSL 3578

Query: 184  RGPYEKMFSINDSG 197
                + +FS++ +G
Sbjct: 3579 DPQMDNLFSVSSTG 3592



 Score = 42.7 bits (99), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 54/191 (28%), Positives = 86/191 (45%), Gaps = 30/191 (15%)

Query: 56   ENLPVNYVLLTVTTNKP---RDLRVKYWLSNDYG-ERFSISRQ-GDISLMQCLDYETEDS 110
            E++P+   ++TV+ +     RD  ++Y + +  G   F I  + G I     LD E+   
Sbjct: 1041 EDVPIGSSVMTVSAHDEDPGRDGEIRYSIRDGSGVGVFRIDEETGVIETSDRLDRESTPH 1100

Query: 111  YRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSV-IG 166
            Y  TVYATD     +++   + I V +VND  P+   P   ++ P +   + +P  V + 
Sbjct: 1101 YWLTVYATDQGVVPLSSFIEIYIEVEDVNDNAPQTSEP---VYYPEV--MENSPKDVSVV 1155

Query: 167  KVEAADGDKGDRVTLSLRGPYEKMFSINDSGHISIVDLSALNTSTIQ-----------LV 215
            ++EA D D      L       K+ S N  G  SI   + L T+T +           L 
Sbjct: 1156 QIEAFDPDSSSDDKLMY-----KITSGNPQGFFSIHPKTGLITTTSRKLDREQQDEHILE 1210

Query: 216  VVATDTGNPPR 226
            V  TD G+PPR
Sbjct: 1211 VTVTDNGSPPR 1221



 Score = 40.8 bits (94), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 67/148 (45%), Gaps = 14/148 (9%)

Query: 87   ERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDTL-----MTTSATVNISVVNVNDWDP 140
            +RFSI S  G + + + LD E +  +   + A D       + ++  + +S+ +VND  P
Sbjct: 862  DRFSIDSVTGVVKIARPLDREVQHVHYLKIEARDQAKEEPQLFSTVLLKVSLEDVNDNPP 921

Query: 141  RFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSIND-SG 197
             F  P Y + +      DL  G++I  +EA D D G   +V  SL    E  F ++  SG
Sbjct: 922  MFIPPNYRVKV----REDLPEGTIIMWLEAYDPDLGQSSQVRYSLMDHGEGNFDVDKLSG 977

Query: 198  HISIV-DLSALNTSTIQLVVVATDTGNP 224
             I IV  L         L V A D G P
Sbjct: 978  AIRIVQQLDFEKKQVYNLTVRAKDKGKP 1005



 Score = 40.8 bits (94), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 45/140 (32%), Positives = 62/140 (44%), Gaps = 18/140 (12%)

Query: 82   SNDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDTLM---TTSATVNISVVNVND 137
            S DY   F I S  G ISL++ LDYE    +R +V A D  M   ++   + + V ++ND
Sbjct: 2323 SQDY---FHIDSSTGLISLVRTLDYEQFQQHRISVRAVDGGMPPLSSDVIITVDVTDLND 2379

Query: 138  WDPRFRYPQYELFL-PHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSI 193
              P F    YE  +  H P      G  +  V+A D D  D   L    L G   K F I
Sbjct: 2380 NPPLFDQQIYEARISEHAPH-----GHFVTCVKACDADSSDVDKLEYSILSGNDHKNFVI 2434

Query: 194  NDSGHISIVDLSALNTSTIQ 213
            +      I+ LS L   T++
Sbjct: 2435 D--SETGIITLSNLRRHTLK 2452



 Score = 37.7 bits (86), Expect = 8.7,   Method: Compositional matrix adjust.
 Identities = 58/197 (29%), Positives = 84/197 (42%), Gaps = 12/197 (6%)

Query: 42   ELQFSKNEYSVSALENLPVNYVLLTVTT-NKPRDLRVKYWLSNDYGERFSISRQGDISLM 100
            +L+F+++ YS    EN      L  +T    P +  + Y + N    RF ISR   +   
Sbjct: 1970 QLKFTQDFYSAVVKENSTEAKTLAVITAIGNPINEPLFYHILNP-DRRFKISRTSGVLST 2028

Query: 101  QCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL--AD 158
              + ++ E    F V    T   T + V   VV V   D     P + + LP+  +   D
Sbjct: 2029 TGVPFDREQQEMFDVVVEVTKEHTPSVVAHVVVKVTVEDQNDNAPVF-VNLPYYAVVKVD 2087

Query: 159  LTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDSGHISIV---DLSALNTSTIQ 213
               G VI  V A D D G    V   L+  +E  F I  +G IS++   +L  LN   + 
Sbjct: 2088 TEVGHVIRSVTAVDRDSGRNGEVHYYLKEHHEH-FQIGPAGEISLIKQFELDTLNKEYL- 2145

Query: 214  LVVVATDTGNPPRQASV 230
            + VVA D GNP   A V
Sbjct: 2146 VTVVAKDGGNPAFSAEV 2162


>gi|402873140|ref|XP_003900444.1| PREDICTED: protocadherin Fat 2 [Papio anubis]
          Length = 4349

 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 57/194 (29%), Positives = 91/194 (46%), Gaps = 23/194 (11%)

Query: 43   LQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGER---FSISRQ-GDIS 98
            L F +  YS + +E  PVN+++  ++      L   +W +   G++   F I +  G I 
Sbjct: 1347 LAFDETHYSFTVMETDPVNHMVGVISVEGRPGL---FWFNISGGDKDMDFDIEKTTGSIV 1403

Query: 99   LMQCLDYETEDSYRFTVYATDTLMTTSATVNISVV-NVNDWDPRFRYPQYELFLPHIPLA 157
            + + LD     SY  TV  TD   T +  V+I ++ N+N   P+F   +YE+ +P     
Sbjct: 1404 IARPLDTRRRSSYNLTVEVTDGSRTIATQVHIFMIANINHHRPQFLETRYEVRVPQ---- 1459

Query: 158  DLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSGHISIVDLSALNTSTIQLVVV 217
            D  PG  + +V+A D DKG  +  ++ G         D G  S   L  L+ ST  LV V
Sbjct: 1460 DTVPGVELLRVQAIDQDKGKSLIYTIHGS-------QDPGSAS---LFQLDPSTGVLVTV 1509

Query: 218  AT-DTGNPPRQASV 230
               D G+ P Q ++
Sbjct: 1510 GKLDLGSGPSQHTL 1523



 Score = 55.8 bits (133), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 63/201 (31%), Positives = 87/201 (43%), Gaps = 20/201 (9%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTT------NKPRDLRVKYWLSNDYGERFSISRQGD- 96
            +F+  EY  S +EN     +++T+ T       + R +   Y    D   +F IS+ GD 
Sbjct: 2905 RFASEEYRGSVVENSEPGKLVVTLKTLDADISEQNRQVTC-YITEGDPLGQFGISQVGDE 2963

Query: 97   --ISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHI 154
              IS  + LD E    Y   V A+D     S TV I V++VND  P+      +L     
Sbjct: 2964 WRISSRKTLDREHTAKYLLRVTASDGKFQASVTVEIFVLDVNDNSPQCS----QLVYTGK 3019

Query: 155  PLADLTPGSVIGKVEAA--DGDKGDRVTLSLRGPYEKMFSINDSGHISIVDLSALNTS-- 210
               D+ PG  I KV A   D D   ++T SL GP    F + D     +  L+AL+    
Sbjct: 3020 VHEDVFPGHFILKVSATDLDTDTNAQITYSLHGPGAHEFKL-DPHTGELTTLTALDRERK 3078

Query: 211  -TIQLVVVATDTGNPPRQASV 230
                LV  ATD G    QA V
Sbjct: 3079 DVFNLVAKATDGGGRSCQADV 3099



 Score = 55.1 bits (131), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 45/142 (31%), Positives = 69/142 (48%), Gaps = 16/142 (11%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYG----ERFSI-SRQGD 96
            F  + Y     EN+PV   ++ VT    +  RD +V Y LS D G    E F+I S  G 
Sbjct: 2797 FEADPYKAVLTENMPVGTSVIQVTAIDKDTGRDGQVSYRLSADPGSNVHELFAIDSESGW 2856

Query: 97   ISLMQCLDYETEDSYRFTVYATD----TLMTTSATVNISVVNVNDWDPRFRYPQYELFLP 152
            I+ +Q LD ET  +Y F V A D      +++ A V +S+ + ND  PRF   +Y   + 
Sbjct: 2857 ITTLQELDCETCQTYHFHVVAYDHGQTIQLSSQALVQVSITDENDNAPRFASEEYRGSV- 2915

Query: 153  HIPLADLTPGSVIGKVEAADGD 174
               + +  PG ++  ++  D D
Sbjct: 2916 ---VENSEPGKLVVTLKTLDAD 2934



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 59/228 (25%), Positives = 101/228 (44%), Gaps = 25/228 (10%)

Query: 28   LATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWL--S 82
            + T++V+    +    QF ++ YS   LEN  V  V+LTV+    + P +  + Y L   
Sbjct: 3304 VTTVVVNITDVNEHRPQFPQDPYSTRVLENALVGDVILTVSATDEDGPLNSDITYSLIGG 3363

Query: 83   NDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWD 139
            N  G      ++G++ + + LD+E   SY   + ATD+    +     + I V +VND  
Sbjct: 3364 NQLGHFTIHPKKGELQVAKALDWEQASSYSLKLRATDSGQPPLHEDTDITIQVADVNDNP 3423

Query: 140  PRFRYPQYELFLPHIPLADLTP-GSVIGKVEAADGDKGD-------RVTLSLRGPYEKMF 191
            PRF    Y        + + +P GS + ++  +D D  +       R+T   +G     F
Sbjct: 3424 PRFFQLNYS-----TTVQENSPIGSKVLQLILSDPDSPENGPPYSFRIT---KGNDGSAF 3475

Query: 192  SINDSGHISIVD-LSALNTSTIQLVVVATDTGNPPRQASVPAIMHFPE 238
             +   G +   + LS       QL + A+D+G PP  +S    +H  E
Sbjct: 3476 RVTPDGWLVTAEGLSRRAQEWYQLQIQASDSGIPPLSSSTSVCVHVTE 3523



 Score = 46.6 bits (109), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 65/245 (26%), Positives = 101/245 (41%), Gaps = 29/245 (11%)

Query: 5    DDFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQ-------------FSKNEYS 51
            D +L  ITL  +   Y   ++Y L  +       SL+  +             F    Y 
Sbjct: 2119 DPYLGDITLK-KPFDYQALNKYRLKVIAQDGGTPSLQSEEEVLVTVRNKSNPLFQSPYYK 2177

Query: 52   VSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGERFSIS--RQGDISLMQCLDYETED 109
            V   EN+ +   +L      P  LR+ Y +  +       +  + G +++   LDYE++ 
Sbjct: 2178 VRVPENITLYTPILHTQARSPEGLRLIYNIVEEEPLMLFTTDFKTGVLTVTGPLDYESKT 2237

Query: 110  SYRFTVYATDTLMT--TSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGK 167
             + FTV ATDT +   + ATV + V +VND  P F    Y   +    L   TP   + +
Sbjct: 2238 KHVFTVRATDTALGSFSEATVEVLVEDVNDNPPTFSQLVYTTSISE-GLPAQTP---VIQ 2293

Query: 168  VEAADGDKGDRVTLSLR-----GPYEKMFSINDS-GHISIV-DLSALNTSTIQLVVVATD 220
            + A+D D G    +S +         K F IN S G +S V +L         + V A D
Sbjct: 2294 LLASDRDSGQNRDVSYQIVEDGSDVSKFFQINGSTGEMSTVQELDYEAQQHFHVKVRAMD 2353

Query: 221  TGNPP 225
             G+PP
Sbjct: 2354 KGDPP 2358



 Score = 46.2 bits (108), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 65/242 (26%), Positives = 103/242 (42%), Gaps = 21/242 (8%)

Query: 10   PITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTT 69
            P TL V+A    +   + LAT+I+    +      FSK+EY V   E++PV   +L V+ 
Sbjct: 1625 PHTLTVKAEDQGSPQWHDLATVIIHVYPSDRSTPIFSKSEYFVEIPESIPVGSPILLVSA 1684

Query: 70   NKPRDLRVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDTLMT-TSATV 128
                ++  +    N  G     S  G IS  + LD+E   SY+  +  ++     T   V
Sbjct: 1685 MSSSEVTYELREGNKDGVFSMNSYSGLISTQKNLDHEKISSYQLKIRGSNMAGAFTDVMV 1744

Query: 129  NISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGK------VEAADGDKGDRVTLS 182
             + +++ ND  P F       F+  I  A      ++ K      + A+D DK     L 
Sbjct: 1745 VVDIIDENDNAPMFL---KSTFVGQISEAAPLYSMIMDKNNNPFVIHASDSDKETNSLLV 1801

Query: 183  ---LRGPYEKMFSINDS-GHISIV-DLSALNTSTIQLVVVATDTGNP----PRQASVPAI 233
               L     K F I+ S G ++IV ++   +  + Q  V   D G+P    PR A V  I
Sbjct: 1802 YKILEPEALKFFKIDPSMGTLTIVSEMDYESMPSFQFCVYVHDQGSPILFAPRPAQV--I 1859

Query: 234  MH 235
            +H
Sbjct: 1860 IH 1861



 Score = 45.4 bits (106), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 48/143 (33%), Positives = 75/143 (52%), Gaps = 11/143 (7%)

Query: 95   GDISLMQCLDYETEDSYRFTVYATD----TLMTTSATVNISVVNVNDWDPRFRYPQYELF 150
            G +S  + LD E +D +   V   D    +L +TS  V I +++VND  P F +  + + 
Sbjct: 1192 GLLSTARQLDRENKDEHILEVTVLDNGEPSLKSTSRVV-IGILDVNDNPPVFSHKLFNVR 1250

Query: 151  LPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIND-SGHISIVDLSAL 207
            LP   L+ ++ G V  ++ A+D D+G   RVT S++   E+ FSI+  +G +S       
Sbjct: 1251 LPER-LSPVSSGPVY-RLVASDLDEGLNGRVTYSVKESDEEGFSIDPVTGVVSSSSTFTA 1308

Query: 208  NTSTIQLVVVATDTGNPPRQASV 230
                I L + ATD+G PP  ASV
Sbjct: 1309 GEYNI-LTIKATDSGQPPLSASV 1330



 Score = 43.5 bits (101), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 59/202 (29%), Positives = 88/202 (43%), Gaps = 24/202 (11%)

Query: 41   RELQFSKNEYSVSALENLPVN--YVLLTVTTNKPRDLRVKYWLSNDYGERFSISRQGDIS 98
            + LQF ++ Y+ +  ENL      V+L V  N   D  + Y+L N       +   G + 
Sbjct: 1964 KSLQFDQDVYTAAVKENLQDRKALVILGVQGNHLNDT-LSYFLLNGTDMFHMVQSAGVLQ 2022

Query: 99   LMQ-CLDYETEDSYRFTVYATDTLM---TTSATVNISVVNVNDWDPRFRY-PQYELFLPH 153
                  D E +D++   V   D         A V +S+ +VND  P+F++ P Y +    
Sbjct: 2023 TRGVAFDREQQDTHELAVEVRDNRTPQRVAQALVRVSIEDVNDNPPKFKHLPYYTI---- 2078

Query: 154  IPLADLT-PGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDS-GHISI---VDLSA 206
              + D T PG V+ +V A D D G    VT      Y   F I+   G I++    D  A
Sbjct: 2079 --IQDGTEPGDVLFQVSATDEDLGTNGAVTYEFAEDY-TYFRIDPYLGDITLKKPFDYQA 2135

Query: 207  LNTSTIQLVVVATDTGNPPRQA 228
            LN    +L V+A D G P  Q+
Sbjct: 2136 LN--KYRLKVIAQDGGTPSLQS 2155



 Score = 42.7 bits (99), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 65/229 (28%), Positives = 98/229 (42%), Gaps = 18/229 (7%)

Query: 10   PITLVVRAIQYDNQDRYA-LATLIVSKAGTSLRELQFSKNEYSVSALENLPVN-YVLLTV 67
            P+ L VRA         + L T+ VS  G       F   E+SV   E+ P    VL   
Sbjct: 3182 PLELTVRASDLGTPISLSTLGTVTVSVVGLEDYLPVFLNTEHSVQVPEDAPPGTEVLQLA 3241

Query: 68   TTNKPRDLRVKYWL--SNDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDTLMTT 124
            T  +P   +  Y +   N+ G RF + +R G + +   LD+ET   Y  ++  +    ++
Sbjct: 3242 TLTRPGAEKTGYRMVGGNEQG-RFRLDARTGILYVNASLDFETSPKYFLSIECSRKSSSS 3300

Query: 125  SATVNISVVN---VNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDK--GDRV 179
             + V   VVN   VN+  P+F    Y   +    L +   G VI  V A D D      +
Sbjct: 3301 LSDVTTVVVNITDVNEHRPQFPQDPYSTRV----LENALVGDVILTVSATDEDGPLNSDI 3356

Query: 180  TLSLRGPYE-KMFSIN-DSGHISIVD-LSALNTSTIQLVVVATDTGNPP 225
            T SL G  +   F+I+   G + +   L     S+  L + ATD+G PP
Sbjct: 3357 TYSLIGGNQLGHFTIHPKKGELQVAKALDWEQASSYSLKLRATDSGQPP 3405



 Score = 42.0 bits (97), Expect = 0.57,   Method: Compositional matrix adjust.
 Identities = 43/154 (27%), Positives = 71/154 (46%), Gaps = 15/154 (9%)

Query: 51  SVSALENLPVNYVLLTVTTNKPR---DLRVKYWLSNDYGER-FSISRQ-GDISLMQCLDY 105
           S+  LE++P+N  L  +    P    + ++ Y +++   E  F I  + G +++   LDY
Sbjct: 721 SIDVLESVPINTPLARLAATDPDAGFNGKLVYVIADGNEEGCFDIELETGLLTVAAPLDY 780

Query: 106 ETEDSYRFTVYATDTLMTTSATVNISVVNVNDWD---PRFRYPQYELFLPHIPLADLTPG 162
           E  + Y   V   D      ++  +  VNV DW+   PRF    Y+L +      D   G
Sbjct: 781 EVTNFYILNVTVYDLGTPQKSSWKLLTVNVKDWNDNAPRFPPGGYQLTISE----DTEVG 836

Query: 163 SVIGKVEAADGDKGD--RVTLSLRGPYEKMFSIN 194
           + I ++   D D  D  RV  +L  P EK FS++
Sbjct: 837 TTIAELTTKDADSEDNGRVRYTLLSPTEK-FSLH 869



 Score = 41.2 bits (95), Expect = 0.80,   Method: Compositional matrix adjust.
 Identities = 39/133 (29%), Positives = 68/133 (51%), Gaps = 14/133 (10%)

Query: 95   GDISLMQCLDYETEDSYRFTVYATDT-----LMTTSATVNISVVNVNDWDPRFRYPQYEL 149
            G ++++  +DYE+  S++F VY  D           A V I V +VND  PRF    YE+
Sbjct: 1820 GTLTIVSEMDYESMPSFQFCVYVHDQGSPILFAPRPAQVIIHVRDVNDSPPRFSEQIYEV 1879

Query: 150  FLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSIND-SGHISIVDLSAL 207
             +    +  + PG  +  V A+D D    V  S++ G  ++  +I+  +G IS+++ + L
Sbjct: 1880 AI----VGPIHPGMELLMVRASDDDS--EVNYSIKTGNADEAVTIHPITGSISVLNPAFL 1933

Query: 208  NTSTIQLVVVATD 220
              S  +L + A+D
Sbjct: 1934 GLSR-KLTIRASD 1945



 Score = 40.0 bits (92), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 55/198 (27%), Positives = 90/198 (45%), Gaps = 23/198 (11%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTTNKPRD------LRVKYWLSNDYGERFSISRQ-GD 96
            +FS+  Y+ SALE+LP    +  V     +D      +R     SN  G  FS+    G 
Sbjct: 2690 KFSEPLYTFSALEDLPEGSEIGVVKAVAAQDPVIYSLVRGTTPESNKDG-VFSLDPDTGV 2748

Query: 97   ISLMQCLDYETEDSYRFTVYA---TDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
            I + + +D+E+   Y+  V A    ++ + +  +VNI V +VND  P F    Y+  L  
Sbjct: 2749 IKVRKPMDHESTKLYQIDVMAHCLQNSDVVSLVSVNIQVGDVNDNRPVFEADPYKAVL-- 2806

Query: 154  IPLADLTPGSVIGKVEAADGDKGDRVTLSLR------GPYEKMFSIN-DSGHISIV-DLS 205
                ++  G+ + +V A D D G    +S R          ++F+I+ +SG I+ + +L 
Sbjct: 2807 --TENMPVGTSVIQVTAIDKDTGRDGQVSYRLSADPGSNVHELFAIDSESGWITTLQELD 2864

Query: 206  ALNTSTIQLVVVATDTGN 223
                 T    VVA D G 
Sbjct: 2865 CETCQTYHFHVVAYDHGQ 2882


>gi|119514223|gb|ABL75886.1| protocadherin 2G11 [Takifugu rubripes]
          Length = 940

 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 61/200 (30%), Positives = 101/200 (50%), Gaps = 21/200 (10%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPR-----DLRVKYW-LSNDYGERFSISRQ-GDI 97
           FS+  Y  S  EN P++ V++ V+          D+  ++  +S D    FSI ++ G I
Sbjct: 236 FSQAVYKASLPENSPLDTVVMQVSATDADEGVNGDVTYEFGHVSEDVKNVFSIDKKSGQI 295

Query: 98  SLMQCLDYETEDSYRFTVYATDTL-MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
            ++  +DYE+E SY   V A D L +++ A V ISV +VND  P          +P    
Sbjct: 296 KVISVIDYESESSYEIRVKAKDGLGLSSYAKVIISVTDVNDNAPIINIKSLTNPVPE--- 352

Query: 157 ADLTPGSVIG--KVEAADGDKGDRVTLSLRG--PYEKMFSINDSGHISIVDLSALN---T 209
            D++PGS +G   V+  D +K  +V  S++   P++ + SI +  + S+V    L+    
Sbjct: 353 -DVSPGSEVGIINVQDRDSEKNRQVRCSIQQNVPFKLVPSIKN--YYSLVTTGQLDRELV 409

Query: 210 STIQLVVVATDTGNPPRQAS 229
           S   + + ATD G+PP  +S
Sbjct: 410 SDYNITISATDEGSPPLSSS 429



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 71/272 (26%), Positives = 116/272 (42%), Gaps = 35/272 (12%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRDLR----VKYWL--SNDYGERFS--ISRQGD 96
           F +  YS    EN      L +V+   P D R    V Y L  +   G   S  +S  GD
Sbjct: 446 FEEESYSAYVSENNRAGSTLCSVSAGDP-DWRQNGTVIYSLLAAEVNGAPVSSYVSVNGD 504

Query: 97  ISLMQC---LDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYE-- 148
             L+      DYE   S++  V A D     ++++ TV++ + +VND  P+  YP  E  
Sbjct: 505 TGLIHAVRSFDYEQLRSFKVHVMARDNGSPPLSSNVTVSVFISDVNDNSPQILYPAPEGN 564

Query: 149 LFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-DSGHISIV-D 203
            F+  +       GS++ KV A D D G    LS   ++     +FSI   SG I    D
Sbjct: 565 SFMTELVPKAAHGGSLVSKVIAVDADSGQNAWLSYHIVKSSDPGLFSIGVHSGEIRTQRD 624

Query: 204 LSALNTSTIQLVVVATDTGNPPRQASVPAIMHFPEAIVQ----------QASSKLNSGTS 253
           +S  ++    L+V   D G P   A+    +   + + +          + +SKL   TS
Sbjct: 625 ISESDSMKQNLIVAVKDNGQPSLSATCSMYLLISDNLAEVPELKDISYDEKNSKL---TS 681

Query: 254 STVLIILGVVLIVLGFVIILLILYIHKNKHTK 285
             ++ ++ V    L F+II+L +   + +  +
Sbjct: 682 YLIIALVSVSTFFLTFIIIILGVRFCRRRKPR 713


>gi|354490726|ref|XP_003507507.1| PREDICTED: protocadherin Fat 1-like [Cricetulus griseus]
 gi|344246355|gb|EGW02459.1| Protocadherin Fat 1 [Cricetulus griseus]
          Length = 4589

 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 63/218 (28%), Positives = 102/218 (46%), Gaps = 20/218 (9%)

Query: 29   ATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDL----RVKYWLSND 84
            A + V+  G +L    F +NEY     EN P+ + L+       RD      + Y + ND
Sbjct: 2477 AQVHVTVMGGNLHSPVFLQNEYEAELAENAPL-HTLVAQVKAMDRDSGIYSHITYHIVND 2535

Query: 85   YG-ERFSISRQGDISLMQCLDYET--EDSYRFTVYATDTLMTTS-ATVNISVVNVNDWDP 140
            +  +RF ++ +G I  ++ LD ET  E      + A D     +  TVN+ + + ND  P
Sbjct: 2536 FAKDRFYVNDRGQIFTLEKLDRETPAEKVISIRLMAKDAGGKVAFCTVNVILTDDNDNAP 2595

Query: 141  RFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDR--VTLSLRGPYEKM---FSIND 195
            +FR  +YE+ +     +    G+ + KV A+D D+G    VT ++    E +     IN 
Sbjct: 2596 QFRSTKYEVNIG----SSAAKGTSVVKVFASDADEGSNADVTYAIEADSESVKENLEINK 2651

Query: 196  -SGHISIVD-LSALNTSTIQLVVVATDTGNPPRQASVP 231
             +G I+  + L  L        V A D G+PPR++ VP
Sbjct: 2652 LTGLITTKESLIGLENEFFTFFVRAVDNGSPPRESVVP 2689



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 41/156 (26%), Positives = 79/156 (50%), Gaps = 11/156 (7%)

Query: 33   VSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYW---LSNDYGERF 89
            +SK   SL  + F ++ ++ + +E+ PV +++  ++   P    +  W   +  +Y   F
Sbjct: 1347 ISKPKPSLEPISFEESVFTFTVMESDPVAHMIGVISVEPPG---MPLWFDIIGGNYDSHF 1403

Query: 90   SISR-QGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYE 148
             + +  G I + + LD E + +Y  TV ATD   T    V I V++ ND  P+F   +YE
Sbjct: 1404 DVDKGTGTIIVAKPLDAEQKSNYNLTVEATDGTTTILTQVLIKVIDTNDHRPQFSTSKYE 1463

Query: 149  LFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR 184
            + +P     D  P + I ++ A D D+ +++  +L+
Sbjct: 1464 VTVPE----DTEPETEILQISAVDKDEKNKLIYTLQ 1495



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 61/244 (25%), Positives = 115/244 (47%), Gaps = 19/244 (7%)

Query: 2    INEDDFLQPITLVVRAIQYDNQDRYALA-TLIVSKAGTSLREL--QFSKNEYSVSALENL 58
            + E D  +  +  ++ I  D+ ++  L+ T IV    T + +   +F+   Y  +  E+ 
Sbjct: 2873 LKELDHEERASYQIKVIASDHGEKVQLSSTAIVDVTVTDVNDSPPRFTAEIYKGTVSEDD 2932

Query: 59   PVNYVLLTVTT----NKPRDLRVKYWLSN-DYGERFS---ISRQGDISLMQCLDYETEDS 110
            P   V+  ++T    ++  + +V Y+++  D   +F+   I  +  + + + LD E +DS
Sbjct: 2933 PPGGVIAILSTTDADSEEINRQVTYFITGGDALGQFAVENIQNEWKVYVKKPLDREQKDS 2992

Query: 111  YRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEA 170
            Y  T+ ATD   ++ A V + V++ ND  P      Y   +P     D  PG ++ +V A
Sbjct: 2993 YLLTITATDGTFSSKARVEVKVLDANDNSPVCEKTLYSDTIPE----DALPGKLVMQVSA 3048

Query: 171  ADGD--KGDRVTLSLRGPYEKMFSIN-DSGHI-SIVDLSALNTSTIQLVVVATDTGNPPR 226
             D D      +T +L G   + F +N D+G + ++  L     +   L+V ATD G    
Sbjct: 3049 TDADIRSNAEITYTLFGSGAEKFKLNPDTGELRTLAPLDREEQAVYNLLVKATDGGGRSC 3108

Query: 227  QASV 230
            QA++
Sbjct: 3109 QATI 3112



 Score = 55.1 bits (131), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 57/199 (28%), Positives = 99/199 (49%), Gaps = 19/199 (9%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSN-DYGERFSIS-RQGDISLMQC 102
            F K  YS    EN+ ++  ++ V  N P  L+V Y +++ D   +F+I+   G I+++  
Sbjct: 2183 FEKAFYSAEIPENIQMHSPVVHVQANSPEGLKVFYSITDGDPFSQFTINFNTGVINVIAP 2242

Query: 103  LDYETEDSYRFTVYATDTLMTTSATVNISVV--NVNDWDPRFRYPQYELFLPHIPLADLT 160
            LD+E+  +Y+ ++ ATD+L    A V + ++  ++ND  P F    Y   L    +    
Sbjct: 2243 LDFESHPAYKLSIRATDSLTGAHAEVFVDIIVEDINDNPPVFVQQSYTTTLSEAAVI--- 2299

Query: 161  PGSVIGKVEAADGDK--GDRVTLSLRGPYEK---MFSIN-DSGHISIVDLSALNTSTIQ- 213
             G+ + +V+A D D      V+  + G + K    F I+ ++G IS+V   AL+    Q 
Sbjct: 2300 -GTPVLQVKATDSDSEPNRGVSYQMFGNHSKSHDHFHIDSNTGLISLV--RALDYEQFQQ 2356

Query: 214  --LVVVATDTGNPPRQASV 230
              + V A D G PP  + V
Sbjct: 2357 HKVFVRAVDGGMPPLSSDV 2375



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 61/213 (28%), Positives = 96/213 (45%), Gaps = 17/213 (7%)

Query: 27   ALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLS---- 82
            A +T++VS    +     F   EY  +  E++ +   +L V     RD+     ++    
Sbjct: 3213 ATSTVVVSVLDINDNPPVFEYREYGATVSEDILIGTEVLQVYAAS-RDIEANAEITYSII 3271

Query: 83   --NDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVN 136
              N++G +FS+ S+ G I +++ LDYE+   Y  TV ATD     ++  ATVNI+V ++N
Sbjct: 3272 SGNEHG-KFSMDSKTGAIFIIENLDYESSHEYYLTVEATDGGTPSLSDVATVNINVSDIN 3330

Query: 137  DWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS-LRGPYEKMFSIND 195
            D  P F    Y   +     A L    +    + ADG     +  S + G     F+I+ 
Sbjct: 3331 DNTPVFSQDTYTTVVGED--AALEQSVITIMADDADGPSNSHIRYSIIEGNQGSPFTIDP 3388

Query: 196  -SGHISIVD-LSALNTSTIQLVVVATDTGNPPR 226
              G + +   L     S   L V A D GNPPR
Sbjct: 3389 IRGEVKVTKPLDRETISGYTLTVQAADNGNPPR 3421



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 62/225 (27%), Positives = 107/225 (47%), Gaps = 19/225 (8%)

Query: 13   LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKP 72
            L+V+A   D   R   AT++++    +    +F+ + Y+++  EN     +L  V     
Sbjct: 3096 LLVKAT--DGGGRSCQATIVLTLEDVNDNAPEFTADPYTITVFENTEPGTLLTRVQATDA 3153

Query: 73   R---DLRVKYWLSNDYGERFSISR-QGDISLMQCLDYETEDSYRFTVYATDT----LMTT 124
                + ++ Y L +    +FSIS   G I L + LD E +  Y  T+ A D      +T 
Sbjct: 3154 DAGLNRKISYSLIDSADGQFSISEVSGIIQLEKHLDREQQAVYTLTLKAVDQGVPRKLTA 3213

Query: 125  SATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAA--DGDKGDRVTLS 182
            ++TV +SV+++ND  P F Y +Y   +      D+  G+ + +V AA  D +    +T S
Sbjct: 3214 TSTVVVSVLDINDNPPVFEYREYGATVSE----DILIGTEVLQVYAASRDIEANAEITYS 3269

Query: 183  -LRGPYEKMFSIND-SGHISIVD-LSALNTSTIQLVVVATDTGNP 224
             + G     FS++  +G I I++ L   ++    L V ATD G P
Sbjct: 3270 IISGNEHGKFSMDSKTGAIFIIENLDYESSHEYYLTVEATDGGTP 3314



 Score = 51.2 bits (121), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 55/219 (25%), Positives = 100/219 (45%), Gaps = 28/219 (12%)

Query: 4    EDDFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYV 63
            E++F    T  VRA+   +  R ++  + V      ++  +FS+  Y+ +  E++P+   
Sbjct: 2666 ENEFF---TFFVRAVDNGSPPRESVVPVYVRILPPEMQLPRFSEPFYTYAISEDMPIGTE 2722

Query: 64   LLTVTTNKPRDLRVKYWL------SNDYGERFSISRQ-GDISLMQCLDYETEDSYRFTVY 116
            +  +     R   V Y L       ++  E F I +Q G + L + LD+ET   Y+F++ 
Sbjct: 2723 IDLIRVEHSR--AVLYTLVKGNTPESNRDEFFVIDKQSGRLKLEKSLDHETTKWYQFSIL 2780

Query: 117  ATDTL----MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAAD 172
            A  T+    +  S  V+I V + ND  P      YE F+    + +L  GS + ++ A+D
Sbjct: 2781 ARCTMDDYEVVASIDVSIQVKDANDNSPVLESNPYEAFI----VENLPGGSRVIQIRASD 2836

Query: 173  GDKGDRVTLSLRGPYEKMFSINDSGHISIVDLSALNTST 211
             D G    +        M+S++ S    I++  A+N  T
Sbjct: 2837 LDSGTNGQV--------MYSLDQSQGADIIESFAINVET 2867



 Score = 46.6 bits (109), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 56/195 (28%), Positives = 88/195 (45%), Gaps = 20/195 (10%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTTNKPRDL----RVKYWLSNDYGERFSI-SRQGDIS 98
            +F +  Y V   E+  VN  ++ V     +DL     V Y +  D  +RFSI S  G + 
Sbjct: 822  EFLQESYFVEVSEDKEVNSEIIQVEATD-KDLGPSGHVTYSILTD-TDRFSIDSATGVVR 879

Query: 99   LMQCLDYETEDSYRFTVYATDTL-----MTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
            ++Q LD E +  +   + A D       + ++  + +S+ +VND  P+F  P Y + +  
Sbjct: 880  IIQPLDREVQPVHYLKIEARDQATEEPRLFSTVLLKVSLDDVNDNPPKFIPPNYSVKV-- 937

Query: 154  IPLADLTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSIND-SGHISIV-DLSALNT 209
                DL  G++I  +EA D D G   +V  SL    E  F ++  SG + IV  L     
Sbjct: 938  --REDLPEGTIIMWLEAYDPDVGQSSQVRYSLLDHGEGHFDVDKLSGAVRIVQQLDFEKK 995

Query: 210  STIQLVVVATDTGNP 224
                L + A D G P
Sbjct: 996  QVYNLTIRAKDKGKP 1010



 Score = 45.4 bits (106), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 58/215 (26%), Positives = 89/215 (41%), Gaps = 19/215 (8%)

Query: 24  DRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLR---VKYW 80
           DR A   ++V   GT+    +F++  Y  S  EN+P+   ++ V+   P +     V Y 
Sbjct: 443 DRKASTKVMVKVVGTNSNPPEFTQTAYKASFDENVPIGTTVMRVSAVDPDEGENGYVTYS 502

Query: 81  LSNDYGERFSISR-QGDISLMQCLDYE-TEDSYRFTVYATDTLMTTSATVN----ISVVN 134
           ++N     F I    G +S  + LDYE     Y   + A+D  +     V     I++ N
Sbjct: 503 IANLNHVPFVIDHFTGSVSTSENLDYELMPRVYTLRIRASDWGLPYRREVEVLATITLNN 562

Query: 135 VNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYE-KMFSI 193
           +ND  P F     E  +P     DL  G  I  V A D D+   V   +    E  +F +
Sbjct: 563 LNDNTPLFEKINCEGTIPR----DLGVGEQITTVSAIDADELQLVRYQIEAGNELDLFGL 618

Query: 194 NDSGHI-----SIVDLSALNTSTIQLVVVATDTGN 223
           N S  +     S++D      S   L + ATD  N
Sbjct: 619 NPSSGVLSLRHSLMDGLGAKVSFHSLRITATDGEN 653



 Score = 42.7 bits (99), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 56/191 (29%), Positives = 84/191 (43%), Gaps = 30/191 (15%)

Query: 56   ENLPVNYVLLTVTTNKP---RDLRVKYWLSNDYG-ERFSISR-QGDISLMQCLDYETEDS 110
            E++P    ++TV+ +     RD  ++Y + +  G   F I    G I     LD E+   
Sbjct: 1046 EDVPTGSSVMTVSAHDEDTGRDGEIRYSIRDGSGVGVFRIDEVTGVIETSDRLDRESTSH 1105

Query: 111  YRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSV-IG 166
            Y  TVYATD     +++   V I V +VND  P+   P   ++ P I   + +P  V + 
Sbjct: 1106 YWLTVYATDQGVVPLSSFIEVYIEVEDVNDNAPQTSEP---VYYPEI--IENSPKDVSVV 1160

Query: 167  KVEAADGDKGDRVTLSLRGPYEKMFSINDSGHISIVDLSALNTSTIQ-----------LV 215
            ++EA D D      L+      K+ S N  G  SI   + L T+T +           L 
Sbjct: 1161 QIEAFDPDSSSSDKLTY-----KITSGNPQGFFSIHPKTGLITTTSRKLDREQQDEHILE 1215

Query: 216  VVATDTGNPPR 226
            V  TD G PPR
Sbjct: 1216 VTVTDNGTPPR 1226



 Score = 42.0 bits (97), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 49/194 (25%), Positives = 83/194 (42%), Gaps = 12/194 (6%)

Query: 12   TLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNY-VLLTVTTN 70
            TL V+A    N  R    T+ +  +  +     FS++ YSV   EN PV + VL  V T+
Sbjct: 3408 TLTVQAADNGNPPRVNTTTVNIDVSDVNDNAPLFSRDNYSVIIQENKPVGFSVLKLVVTD 3467

Query: 71   KPRDLRVKYWL----SNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDT---LMT 123
            K        +     S +    F +++ G I     +  + +D Y   V   D     ++
Sbjct: 3468 KDSSHNGPPFFFTIVSGNDDNTFEVNQHGVILTAGAIKRKEKDHYLLHVKVADNGKPQLS 3527

Query: 124  TSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSL 183
            +   ++I V+  +   P       E+F+      +   G VIGK+ A D D  D +T SL
Sbjct: 3528 SLTHIDIRVIEESIHPPAIL--PLEIFI--TAFGEEYSGGVIGKIHATDQDVYDTLTYSL 3583

Query: 184  RGPYEKMFSINDSG 197
                + +FS++ +G
Sbjct: 3584 DPHMDGLFSVSSAG 3597



 Score = 40.4 bits (93), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 61/246 (24%), Positives = 99/246 (40%), Gaps = 38/246 (15%)

Query: 28   LATLIVSKAGTSLRELQFSKNEYSVSALENL-PVNYVLLTVTTNKPRDLRVKYWLSNDYG 86
            L  +++    T+    QFS ++Y V+  E+  P   +L     +K    ++ Y L +   
Sbjct: 1440 LTQVLIKVIDTNDHRPQFSTSKYEVTVPEDTEPETEILQISAVDKDEKNKLIYTLQSSID 1499

Query: 87   ----ERFSIS-RQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDW 138
                ++F +    G +   + LD+E    +  TV   D    +    A + ++V ++ND 
Sbjct: 1500 PVSLKKFRLDPATGALYTSEKLDHEAIHQHMLTVMVRDQDVPVKRNFARIIVNVSDMNDH 1559

Query: 139  DPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSGH 198
             P F    YE  +          GSV+ +V A D DKG           E ++SI +SG+
Sbjct: 1560 APWFTSSSYEGRV----YESAAVGSVVLQVTALDKDKGKNA--------EVLYSI-ESGN 1606

Query: 199  I--------------SIVDLSALNTSTIQLVVVATDTGNPPRQASVPAIMHFPEAIVQQA 244
            I              +  +L   N     L+V ATD GNPP   S    +H    +   A
Sbjct: 1607 IGNSFTIDPILGSIKTARELDRSNQVEYDLIVKATDQGNPP--MSEMTSVHIAVTVADNA 1664

Query: 245  SSKLNS 250
            S K  S
Sbjct: 1665 SPKFTS 1670



 Score = 39.7 bits (91), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 59/199 (29%), Positives = 86/199 (43%), Gaps = 30/199 (15%)

Query: 45   FSKNEYSVSALENLPVNYVLLT--------VTTNKPRD---LRVKYWLSNDYGERFSI-S 92
            F++ EYS    E+  VN V+LT          T+  R+   L V   +       F+I +
Sbjct: 1766 FTRAEYSGFVSESASVNSVVLTDRNVPLVIRATDADRESNALLVYQIVEPSVHNYFAIDA 1825

Query: 93   RQGDISLMQCLDYETEDSYRFTVYATDT-----LMTTSATVNISVVNVNDWDPRFRYPQY 147
              G I  +  LDYE    + FTV   D          +A V I V+++ND  P F  P Y
Sbjct: 1826 TTGAIHTVLSLDYEETRVFHFTVQVHDMGTPRLFAECAANVTIHVIDINDCPPVFSKPLY 1885

Query: 148  E--LFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSL-RGPYEKMFSIN-DSGHISI 201
            E  L LP         G  I  V A D D     ++  S+  G   + FS++  +G I+I
Sbjct: 1886 EASLLLP------TYKGVKIITVNATDADSRPFSQLIYSITEGNIGEKFSMDYKTGTITI 1939

Query: 202  VDLSALNTSTIQLVVVATD 220
             + + L  S  +L V A+D
Sbjct: 1940 QNTTQLR-SRYELTVRASD 1957



 Score = 38.1 bits (87), Expect = 6.6,   Method: Compositional matrix adjust.
 Identities = 49/173 (28%), Positives = 75/173 (43%), Gaps = 17/173 (9%)

Query: 51   SVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYG---ERFSI-SRQGDISLMQCLDYE 106
            S +A+   PV  V  T + ++P +  V Y +  ++    + F I S  G ISL++ LDYE
Sbjct: 2294 SEAAVIGTPVLQVKATDSDSEP-NRGVSYQMFGNHSKSHDHFHIDSNTGLISLVRALDYE 2352

Query: 107  TEDSYRFTVYATDTLM---TTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGS 163
                ++  V A D  M   ++   V + V ++ND  P F    YE  +          G 
Sbjct: 2353 QFQQHKVFVRAVDGGMPPLSSDVIVTVDVTDLNDNPPLFEQQIYEAKISE----HAAHGH 2408

Query: 164  VIGKVEAADGDKGDRVTLS---LRGPYEKMFSINDSGHISIVDLSALNTSTIQ 213
             +  V+A D D  D   L    L G   K F I+      I+ LS L   T++
Sbjct: 2409 FVMCVKACDADSSDLDKLEYSILSGNDHKSFVID--SETGIITLSNLRRHTLK 2459


>gi|355691768|gb|EHH26953.1| hypothetical protein EGK_17044 [Macaca mulatta]
          Length = 4349

 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 57/194 (29%), Positives = 91/194 (46%), Gaps = 23/194 (11%)

Query: 43   LQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGER---FSISRQ-GDIS 98
            L F +  YS + +E  PVN+++  ++      L   +W +   G++   F I +  G I 
Sbjct: 1347 LAFDETHYSFTVMETDPVNHMVGVISVEGRPGL---FWFNISGGDKDMDFDIEKTTGSIV 1403

Query: 99   LMQCLDYETEDSYRFTVYATDTLMTTSATVNISVV-NVNDWDPRFRYPQYELFLPHIPLA 157
            + + LD     SY  TV  TD   T +  V+I ++ N+N   P+F   +YE+ +P     
Sbjct: 1404 IARPLDTRRRSSYNLTVEVTDGSRTIATQVHIFMIANINHHRPQFLETRYEVRVPQ---- 1459

Query: 158  DLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSGHISIVDLSALNTSTIQLVVV 217
            D  PG  + +V+A D DKG  +  ++ G         D G  S   L  L+ ST  LV V
Sbjct: 1460 DTVPGVELLRVQAIDQDKGKSLIYTIHGS-------QDPGSAS---LFQLDPSTGVLVTV 1509

Query: 218  AT-DTGNPPRQASV 230
               D G+ P Q ++
Sbjct: 1510 GKLDLGSGPSQHTL 1523



 Score = 55.8 bits (133), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 63/201 (31%), Positives = 87/201 (43%), Gaps = 20/201 (9%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTT------NKPRDLRVKYWLSNDYGERFSISRQGD- 96
            +F+  EY  S +EN     +++T+ T       + R +   Y    D   +F IS+ GD 
Sbjct: 2905 RFASEEYRGSVVENSEPGKLVVTLKTLDADISEQNRQVTC-YITEGDPLGQFGISQVGDE 2963

Query: 97   --ISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHI 154
              IS  + LD E    Y   V A+D     S TV I V++VND  P+      +L     
Sbjct: 2964 WRISSRKTLDREHTAKYLLRVTASDGKFQASVTVEIFVLDVNDNSPQCS----QLVYTGK 3019

Query: 155  PLADLTPGSVIGKVEAA--DGDKGDRVTLSLRGPYEKMFSINDSGHISIVDLSALNTS-- 210
               D+ PG  I KV A   D D   ++T SL GP    F + D     +  L+AL+    
Sbjct: 3020 VHEDVFPGHFILKVSATDLDTDTNAQITYSLHGPGAHEFKL-DPHTGELTTLTALDRERK 3078

Query: 211  -TIQLVVVATDTGNPPRQASV 230
                LV  ATD G    QA V
Sbjct: 3079 DVFNLVAKATDGGGRSCQADV 3099



 Score = 55.1 bits (131), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 45/142 (31%), Positives = 69/142 (48%), Gaps = 16/142 (11%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYG----ERFSI-SRQGD 96
            F  + Y     EN+PV   ++ VT    +  RD +V Y LS D G    E F+I S  G 
Sbjct: 2797 FEADPYKAVLTENMPVGTSVIQVTAIDKDTGRDGQVSYRLSADPGSNVHELFAIDSESGW 2856

Query: 97   ISLMQCLDYETEDSYRFTVYATD----TLMTTSATVNISVVNVNDWDPRFRYPQYELFLP 152
            I+ +Q LD ET  +Y F V A D      +++ A V +S+ + ND  PRF   +Y   + 
Sbjct: 2857 ITTLQELDCETCQTYHFHVVAYDHGQTIQLSSQALVQVSITDENDNAPRFASEEYRGSV- 2915

Query: 153  HIPLADLTPGSVIGKVEAADGD 174
               + +  PG ++  ++  D D
Sbjct: 2916 ---VENSEPGKLVVTLKTLDAD 2934



 Score = 51.6 bits (122), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 58/225 (25%), Positives = 100/225 (44%), Gaps = 19/225 (8%)

Query: 28   LATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWL--S 82
            + T++V+    +    QF ++ YS   LEN  V  V+LTV+    + P +  + Y L   
Sbjct: 3304 VTTVVVNITDVNEHRPQFPQDPYSTRVLENALVGDVILTVSATDEDGPLNSDITYSLVGG 3363

Query: 83   NDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWD 139
            N  G      ++G++ + + LD+E   SY   + ATD+    +     + I V +VND  
Sbjct: 3364 NQLGHFTIHPKKGELQVAKALDWEQASSYSLKLRATDSGQPPLHEDTDIAIQVADVNDNP 3423

Query: 140  PRFRYPQYELFLPHIPLADLTP-GSVIGKVEAADGDK---GDRVTLSL-RGPYEKMFSIN 194
            PRF    Y        + + +P GS + ++  +D D    G   +  + +G     F + 
Sbjct: 3424 PRFFQLNYS-----TTVQENSPIGSKVLQLILSDPDSPENGPPYSFQITKGNDGSAFRVT 3478

Query: 195  DSGHISIVD-LSALNTSTIQLVVVATDTGNPPRQASVPAIMHFPE 238
              G +   + LS       QL + A+D+G PP  +S    +H  E
Sbjct: 3479 PDGWLVTAEGLSRRAQEWYQLQIQASDSGIPPLSSSTSVRVHVTE 3523



 Score = 46.2 bits (108), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 65/245 (26%), Positives = 101/245 (41%), Gaps = 29/245 (11%)

Query: 5    DDFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQ-------------FSKNEYS 51
            D +L  ITL  +   Y   ++Y L  +       SL+  +             F    Y 
Sbjct: 2119 DPYLGDITLK-KPFDYQALNKYRLKVIARDGGTPSLQSEEEVLVTVRNKSNPLFQSPYYK 2177

Query: 52   VSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGERFSIS--RQGDISLMQCLDYETED 109
            V   EN+ +   +L      P  LR+ Y +  +       +  + G +++   LDYE++ 
Sbjct: 2178 VRVPENITLYTPILHTQARSPEGLRLIYNIVEEEPLMLFTTDFKTGVLTVTGPLDYESKT 2237

Query: 110  SYRFTVYATDTLMT--TSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGK 167
             + FTV ATDT +   + ATV + V +VND  P F    Y   +    L   TP   + +
Sbjct: 2238 KHVFTVRATDTALGSFSEATVEVLVEDVNDNPPTFSQLVYTTSISE-GLPAQTP---VIQ 2293

Query: 168  VEAADGDKGDRVTLSLR-----GPYEKMFSINDS-GHISIV-DLSALNTSTIQLVVVATD 220
            + A+D D G    +S +         K F IN S G +S V +L         + V A D
Sbjct: 2294 LLASDRDSGQNRDVSYQIVEDGSDVSKFFQINGSTGEMSTVQELDYEAQQHFHVKVRAMD 2353

Query: 221  TGNPP 225
             G+PP
Sbjct: 2354 KGDPP 2358



 Score = 46.2 bits (108), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 65/242 (26%), Positives = 103/242 (42%), Gaps = 21/242 (8%)

Query: 10   PITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTT 69
            P TL V+A    +   + LAT+I+    +      FSK+EY V   E++PV   +L V+ 
Sbjct: 1625 PHTLTVKAEDQGSPQWHDLATVIIHVYPSDRSAPIFSKSEYFVEIPESIPVGSPILLVSA 1684

Query: 70   NKPRDLRVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDTLMT-TSATV 128
                ++  +    N  G     S  G IS  + LD+E   SY+  +  ++     T   V
Sbjct: 1685 MSSSEVTYELREGNKDGVFSMNSYSGLISTQKNLDHEKISSYQLKIRGSNMAGAFTDVMV 1744

Query: 129  NISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGK------VEAADGDKGDRVTLS 182
             + +++ ND  P F       F+  I  A      ++ K      + A+D DK     L 
Sbjct: 1745 VVDIIDENDNAPMFL---KSTFVGQISEAAPLYSMIMDKNNNPFVIHASDSDKETNSLLV 1801

Query: 183  ---LRGPYEKMFSINDS-GHISIV-DLSALNTSTIQLVVVATDTGNP----PRQASVPAI 233
               L     K F I+ S G ++IV ++   +  + Q  V   D G+P    PR A V  I
Sbjct: 1802 YKILEPEALKFFKIDPSMGTLTIVSEMDYESMPSFQFCVYVHDQGSPILFAPRPAQV--I 1859

Query: 234  MH 235
            +H
Sbjct: 1860 IH 1861



 Score = 45.8 bits (107), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 48/143 (33%), Positives = 75/143 (52%), Gaps = 11/143 (7%)

Query: 95   GDISLMQCLDYETEDSYRFTVYATD----TLMTTSATVNISVVNVNDWDPRFRYPQYELF 150
            G +S  + LD E +D +   V   D    +L +TS  V I +++VND  P F +  + + 
Sbjct: 1192 GLLSTARQLDRENKDEHILEVTVLDNGEPSLKSTSRVV-IGILDVNDNPPVFSHKLFNVR 1250

Query: 151  LPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIND-SGHISIVDLSAL 207
            LP   L+ ++ G V  ++ A+D D+G   RVT S++   E+ FSI+  +G +S       
Sbjct: 1251 LPER-LSPVSSGPVY-RLVASDLDEGLNGRVTYSIKESDEEGFSIDPVTGVVSSSSTFTA 1308

Query: 208  NTSTIQLVVVATDTGNPPRQASV 230
                I L + ATD+G PP  ASV
Sbjct: 1309 GEYNI-LTIKATDSGQPPLSASV 1330



 Score = 42.7 bits (99), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 65/229 (28%), Positives = 98/229 (42%), Gaps = 18/229 (7%)

Query: 10   PITLVVRAIQYDNQDRYA-LATLIVSKAGTSLRELQFSKNEYSVSALENLPVN-YVLLTV 67
            P+ L VRA         + L T+ VS  G       F   E+SV   E+ P    VL   
Sbjct: 3182 PLELTVRASDLGTPISLSTLGTVTVSVVGLEDYLPVFLNTEHSVQVPEDAPPGTEVLQLA 3241

Query: 68   TTNKPRDLRVKYWL--SNDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDTLMTT 124
            T  +P   +  Y +   N+ G RF + +R G + +   LD+ET   Y  ++  +    ++
Sbjct: 3242 TLTRPGAEKTGYRMVSGNEQG-RFRLDARTGILYVNASLDFETSPKYFLSIECSRKSSSS 3300

Query: 125  SATVNISVVN---VNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDK--GDRV 179
             + V   VVN   VN+  P+F    Y   +    L +   G VI  V A D D      +
Sbjct: 3301 LSDVTTVVVNITDVNEHRPQFPQDPYSTRV----LENALVGDVILTVSATDEDGPLNSDI 3356

Query: 180  TLSLRGPYE-KMFSIN-DSGHISIVD-LSALNTSTIQLVVVATDTGNPP 225
            T SL G  +   F+I+   G + +   L     S+  L + ATD+G PP
Sbjct: 3357 TYSLVGGNQLGHFTIHPKKGELQVAKALDWEQASSYSLKLRATDSGQPP 3405



 Score = 42.0 bits (97), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 43/154 (27%), Positives = 71/154 (46%), Gaps = 15/154 (9%)

Query: 51  SVSALENLPVNYVLLTVTTNKPR---DLRVKYWLSNDYGER-FSISRQ-GDISLMQCLDY 105
           S+  LE++P+N  L  +    P    + ++ Y +++   E  F I  + G +++   LDY
Sbjct: 721 SIDVLESVPINTPLARLAATDPDAGFNGKLVYVIADGNEEGCFDIELETGLLTVAAPLDY 780

Query: 106 ETEDSYRFTVYATDTLMTTSATVNISVVNVNDWD---PRFRYPQYELFLPHIPLADLTPG 162
           E  + Y   V   D      ++  +  VNV DW+   PRF    Y+L +      D   G
Sbjct: 781 EATNFYILNVTVYDLGTPQKSSWKLLTVNVKDWNDNAPRFPPGGYQLTISE----DTEVG 836

Query: 163 SVIGKVEAADGDKGD--RVTLSLRGPYEKMFSIN 194
           + I ++   D D  D  RV  +L  P EK FS++
Sbjct: 837 TTIAELTTKDADSEDNGRVRYTLLSPTEK-FSLH 869



 Score = 41.6 bits (96), Expect = 0.74,   Method: Compositional matrix adjust.
 Identities = 39/133 (29%), Positives = 68/133 (51%), Gaps = 14/133 (10%)

Query: 95   GDISLMQCLDYETEDSYRFTVYATDT-----LMTTSATVNISVVNVNDWDPRFRYPQYEL 149
            G ++++  +DYE+  S++F VY  D           A V I V +VND  PRF    YE+
Sbjct: 1820 GTLTIVSEMDYESMPSFQFCVYVHDQGSPILFAPRPAQVIIHVRDVNDSPPRFSEQIYEV 1879

Query: 150  FLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSIND-SGHISIVDLSAL 207
             +    +  + PG  +  V A+D D    V  S++ G  ++  +I+  +G IS+++ + L
Sbjct: 1880 AI----VGPIHPGMELLMVRASDDDS--EVNYSIKTGNADEAVTIHPITGSISVLNPALL 1933

Query: 208  NTSTIQLVVVATD 220
              S  +L + A+D
Sbjct: 1934 GLSR-KLTIRASD 1945



 Score = 40.0 bits (92), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 57/202 (28%), Positives = 87/202 (43%), Gaps = 24/202 (11%)

Query: 41   RELQFSKNEYSVSALENLPVN--YVLLTVTTNKPRDLRVKYWLSNDYGERFSISRQGDIS 98
            + LQF ++ Y+ +  E+L      V+L    N   D  + Y+L N       +   G + 
Sbjct: 1964 KSLQFDQDVYTAAVKEDLQDRKALVILGAQGNHLNDT-LSYFLLNGTDMFHMVQSAGVLQ 2022

Query: 99   LMQ-CLDYETEDSYRFTVYATDTLM---TTSATVNISVVNVNDWDPRFRY-PQYELFLPH 153
                  D E +D++   V   D         A V +S+ +VND  P+F++ P Y +    
Sbjct: 2023 TRGVAFDREQQDTHELAVEVRDNRTPQRVAQALVRVSIEDVNDNPPKFKHLPYYTI---- 2078

Query: 154  IPLADLT-PGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDS-GHISI---VDLSA 206
              + D T PG V+ +V A D D G    VT      Y   F I+   G I++    D  A
Sbjct: 2079 --IQDGTEPGDVLFQVSATDEDLGTNGAVTYEFAEDY-TYFRIDPYLGDITLKKPFDYQA 2135

Query: 207  LNTSTIQLVVVATDTGNPPRQA 228
            LN    +L V+A D G P  Q+
Sbjct: 2136 LN--KYRLKVIARDGGTPSLQS 2155



 Score = 39.7 bits (91), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 55/198 (27%), Positives = 90/198 (45%), Gaps = 23/198 (11%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTTNKPRD------LRVKYWLSNDYGERFSISRQ-GD 96
            +FS+  Y+ SALE+LP    +  V     +D      +R     SN  G  FS+    G 
Sbjct: 2690 KFSEPLYTFSALEDLPEGSEIGVVKAVAAQDPVIYSLVRGTTPESNKDG-VFSLDPDTGV 2748

Query: 97   ISLMQCLDYETEDSYRFTVYA---TDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
            I + + +D+E+   Y+  V A    ++ + +  +VNI V +VND  P F    Y+  L  
Sbjct: 2749 IKVRKPMDHESTKLYQIDVMAHCLQNSDVVSLVSVNIQVGDVNDNRPVFEADPYKAVL-- 2806

Query: 154  IPLADLTPGSVIGKVEAADGDKGDRVTLSLR------GPYEKMFSIN-DSGHISIV-DLS 205
                ++  G+ + +V A D D G    +S R          ++F+I+ +SG I+ + +L 
Sbjct: 2807 --TENMPVGTSVIQVTAIDKDTGRDGQVSYRLSADPGSNVHELFAIDSESGWITTLQELD 2864

Query: 206  ALNTSTIQLVVVATDTGN 223
                 T    VVA D G 
Sbjct: 2865 CETCQTYHFHVVAYDHGQ 2882


>gi|383849585|ref|XP_003700425.1| PREDICTED: protocadherin-like wing polarity protein stan-like
            [Megachile rotundata]
          Length = 3164

 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 68/242 (28%), Positives = 113/242 (46%), Gaps = 21/242 (8%)

Query: 6    DFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLL 65
            D+ Q    V+     D+  R   A + V+ +  +     F    YSVS  E+ P+   +L
Sbjct: 765  DYKQEKRFVLTVTASDSGGRTDTALVYVNVSDANNFSPVFENAPYSVSVFEDAPIGTTVL 824

Query: 66   TVT---TNKPRDLRVKYWLSNDYGER----FSISRQ-GDISLMQCLDYETEDSYRFTVYA 117
             V+   ++  ++ +V Y L  D G++    F+I+ Q G I+  + LD E   +Y  TV A
Sbjct: 825  VVSATDSDVGKNAQVTYSLDTDGGDQSASEFTINPQTGAITTTRPLDRELIPAYLLTVTA 884

Query: 118  TDTL---MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEA--AD 172
             D     ++ +  V ISV +VND  P F  PQY+  +P     D+  G+ + +V A  AD
Sbjct: 885  RDGGVPPLSDTTDVEISVTDVNDNSPVFEAPQYQGSIPE----DVLVGTSVLRVSATDAD 940

Query: 173  GDKGDRVTLSLRGPYEKMFSINDSGHISIVDLSALNTSTIQ---LVVVATDTGNPPRQAS 229
             D   RV  +L    +  F+++ +  I I     L+  ++    L  +A D G+P    +
Sbjct: 941  TDLNGRVRYALDDDGDGAFAVDSTTGI-IRTAKPLDRESVARYVLKAIAMDRGSPSLSTT 999

Query: 230  VP 231
            VP
Sbjct: 1000 VP 1001



 Score = 55.5 bits (132), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 62/231 (26%), Positives = 106/231 (45%), Gaps = 25/231 (10%)

Query: 25  RYALATLIVSKAGTSLRELQFSKNEYSVSALENL-----PVNYVLLTVTTNKPRDLRVKY 79
           + A ATL+V     +    QF++  YSV   E+L     PV   +     +   +  V+Y
Sbjct: 463 KTANATLVVRVLDDNDNYPQFTERTYSVWIPEDLDYTANPVIARIRATDADSGNNAAVRY 522

Query: 80  WL-SNDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVN 134
            +   +    FSI S  GD++L++ LDYE+  SY+  + A D      + +  + + V +
Sbjct: 523 AIIGGNTQNTFSIDSMSGDVALVKPLDYESTRSYKIVIRAQDGGSPARSNTTQLLVHVKD 582

Query: 135 VNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGD----RVTLSLR---GPY 187
           VND  PRF    ++  +      ++  G  I +++A D D+G     + T+  R   G  
Sbjct: 583 VNDNAPRFYTSHFQESVSE----NVAIGCSILRIQAYDADEGANAQIKYTIGARDFSGAS 638

Query: 188 EKMFSI---NDSGHI-SIVDLSALNTSTIQLVVVATDTGNPPRQASVPAIM 234
            + F I   +++G I +   L     S  Q  V+A D+G  P+ AS   I+
Sbjct: 639 TENFPITVSSETGWIYTTKQLDREQCSRYQFTVIAADSGEAPKSASATVIL 689



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 56/216 (25%), Positives = 97/216 (44%), Gaps = 27/216 (12%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKY-WLSNDYGERFSIS-------- 92
           F   EY  S  E +PV   ++TV     +  R+  ++Y  LS   G   + S        
Sbjct: 366 FEWPEYDASVREGVPVGSTVVTVKATDQDAGRNAELEYSILSTTSGSGTANSEDTLIFRI 425

Query: 93  --RQGDISLMQCLDYETEDSYRFTVYATD------TLMTTSATVNISVVNVNDWDPRFRY 144
             R G ++    LD E  + Y   +  +D         T +AT+ + V++ ND  P+F  
Sbjct: 426 DPRSGVVTTRTPLDREKTEVYTVILSVSDQATPPSARKTANATLVVRVLDDNDNYPQFTE 485

Query: 145 PQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIND-SGHIS 200
             Y +++P     D T   VI ++ A D D G+   +    + G  +  FSI+  SG ++
Sbjct: 486 RTYSVWIPED--LDYTANPVIARIRATDADSGNNAAVRYAIIGGNTQNTFSIDSMSGDVA 543

Query: 201 IVD-LSALNTSTIQLVVVATDTGNPPRQASVPAIMH 235
           +V  L   +T + ++V+ A D G+P R  +   ++H
Sbjct: 544 LVKPLDYESTRSYKIVIRAQDGGSPARSNTTQLLVH 579



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 63/229 (27%), Positives = 100/229 (43%), Gaps = 23/229 (10%)

Query: 13  LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTT--- 69
           +V+RA    +  R     L+V     +    +F  + +  S  EN+ +   +L +     
Sbjct: 558 IVIRAQDGGSPARSNTTQLLVHVKDVNDNAPRFYTSHFQESVSENVAIGCSILRIQAYDA 617

Query: 70  NKPRDLRVKYWL-SNDYG----ERFSI---SRQGDISLMQCLDYETEDSYRFTVYATDTL 121
           ++  + ++KY + + D+     E F I   S  G I   + LD E    Y+FTV A D+ 
Sbjct: 618 DEGANAQIKYTIGARDFSGASTENFPITVSSETGWIYTTKQLDREQCSRYQFTVIAADSG 677

Query: 122 ---MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDR 178
               + SATV ++V +VND DP F    YE  +      D  PG+ +  V A D D+  R
Sbjct: 678 EAPKSASATVILTVTDVNDNDPYFDPKNYEAVVSE----DDPPGTPVTSVTATDPDEDAR 733

Query: 179 VTLSL-RGPYEKMFSI---NDSGHISIVD-LSALNTSTIQLVVVATDTG 222
           +   +  G     FSI   N  G I++   L         L V A+D+G
Sbjct: 734 IHYEITTGNTRGRFSIASQNGRGLITVAQPLDYKQEKRFVLTVTASDSG 782



 Score = 40.8 bits (94), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 42/140 (30%), Positives = 69/140 (49%), Gaps = 13/140 (9%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVT-TNKPRDL--RVKYWLSNDYGERFSI-SRQGDISLM 100
            F   +Y  S  E++ V   +L V+ T+   DL  RV+Y L +D    F++ S  G I   
Sbjct: 912  FEAPQYQGSIPEDVLVGTSVLRVSATDADTDLNGRVRYALDDDGDGAFAVDSTTGIIRTA 971

Query: 101  QCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLA 157
            + LD E+   Y     A D     ++T+  V I + ++ND  P F   +  L+     +A
Sbjct: 972  KPLDRESVARYVLKAIAMDRGSPSLSTTVPVTIKIEDINDSPPAFENDKIVLY-----IA 1026

Query: 158  DLTP-GSVIGKVEAADGDKG 176
            + +P GS +G++ A D D+G
Sbjct: 1027 ENSPVGSTVGEIYAHDPDEG 1046



 Score = 40.0 bits (92), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 9/91 (9%)

Query: 95  GDISLMQCLDYETEDSYRFTVYATDTLM---TTSATVNISVVNVNDWDPRFRYPQYELFL 151
           G ++    LD E+ D + F V A D      T S T+ ++V++ ND  P F +P+Y+  +
Sbjct: 316 GRVTTRARLDRESVDVHYFKVLAVDDSFPPRTGSTTLQVNVLDANDHAPNFEWPEYDASV 375

Query: 152 PH-IPLADLTPGSVIGKVEAADGDKGDRVTL 181
              +P+     GS +  V+A D D G    L
Sbjct: 376 REGVPV-----GSTVVTVKATDQDAGRNAEL 401


>gi|355687770|gb|EHH26354.1| hypothetical protein EGK_16302 [Macaca mulatta]
          Length = 4591

 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 42/157 (26%), Positives = 77/157 (49%), Gaps = 11/157 (7%)

Query: 33   VSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWL---SNDYGERF 89
            +SK   S   + F ++ ++ + +E+ PV +++  ++   P    +  W      +Y   F
Sbjct: 1346 ISKPKPSPEPISFEESFFTFTVMESDPVAHMIGVISVEPPG---IPLWFDITGGNYDSHF 1402

Query: 90   SISR-QGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYE 148
             + +  G I + + LD E + +Y  TV ATD   T    V I V++ ND  P+F   +YE
Sbjct: 1403 DVDKGTGTIIVAKPLDAEQKSNYNLTVEATDGTTTILTQVFIKVIDTNDHRPQFSTSKYE 1462

Query: 149  LFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRG 185
            + +P     D  P + I  + A D D+ +R+  +L+G
Sbjct: 1463 VVIPE----DTVPETEILHISAVDQDEKNRLIYTLQG 1495



 Score = 61.2 bits (147), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 63/213 (29%), Positives = 104/213 (48%), Gaps = 18/213 (8%)

Query: 33   VSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTV-TTNKPRDL--RVKYWLSNDYG-ER 88
            V+  G +L    F +NEY V   EN P++ +++ V TT+    +   V Y + ND+  +R
Sbjct: 2483 VTVIGGNLHSPAFLQNEYEVELAENAPLHTLVMEVKTTDGDSGIYGDVTYHIVNDFAKDR 2542

Query: 89   FSISRQGDISLMQCLDYET--EDSYRFTVYATDTLMTTS-ATVNISVVNVNDWDPRFRYP 145
            F I+ +G I  ++ LD ET  E      + A D     +  TVN+ + + ND  P+FR  
Sbjct: 2543 FYINERGQIFTLEKLDRETPAEKVISVRLMAKDAGGKVAFCTVNVILTDDNDNAPQFRAT 2602

Query: 146  QYELFLPHIPLADLTPGSVIGKVEAADGDKGDR--VTLSLRGPYEKM---FSIND-SGHI 199
            +YE+ +     +    G+ + KV A+D D+G    VT ++    + +     IN  SG I
Sbjct: 2603 KYEVNIG----SSAAKGTSVIKVLASDADEGSNADVTYAIEADSDSVKENLEINKLSGVI 2658

Query: 200  SIVD-LSALNTSTIQLVVVATDTGNPPRQASVP 231
            +  + L  L        V A D G+P +++ VP
Sbjct: 2659 TTKESLIGLENEFFTFFVRAVDNGSPSKESVVP 2691



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/145 (29%), Positives = 69/145 (47%), Gaps = 8/145 (5%)

Query: 90   SISRQGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYEL 149
            +I  +  + + + LD E  D+Y  T+ ATD   ++ A V + V++ ND  P      Y  
Sbjct: 2974 NIQNEWKVYVKKPLDREKRDNYLLTITATDGTFSSKAIVEVKVLDANDNSPVCEKTLYSD 3033

Query: 150  FLPHIPLADLTPGSVIGKVEAADGD--KGDRVTLSLRGPYEKMFSIN-DSGHISI-VDLS 205
             +P     D+ PG +I ++ AAD D      +T +L G   + F +N D+G +     L 
Sbjct: 3034 TIPE----DVLPGKLIMQISAADADIRSNAEITYTLSGSGAEKFQLNPDTGELKTSAPLD 3089

Query: 206  ALNTSTIQLVVVATDTGNPPRQASV 230
                +   L+V ATD G    QAS+
Sbjct: 3090 REEQAVYHLLVRATDRGGRFCQASI 3114



 Score = 55.1 bits (131), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 61/203 (30%), Positives = 95/203 (46%), Gaps = 27/203 (13%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSN-DYGERFSIS-RQGDISLMQC 102
            F K  YS    EN+ V+  ++ V  N P  L+V Y +++ D   +F+I+   G I+++  
Sbjct: 2185 FEKPFYSAEIAENVQVHSPVVHVQANSPEGLKVFYSITDGDPFSQFTINFNTGVINVIAP 2244

Query: 103  LDYETEDSYRFTVYATDTLMTTSATVNISVV--NVNDWDPRFRYPQYELFLPHIPLADLT 160
            LD+E   +Y+  + ATD+L    A V + ++  ++ND  P F    Y         A L+
Sbjct: 2245 LDFEAHPAYKLNIRATDSLTGAHAEVFVDIIVEDINDNAPVFAQQSY--------AATLS 2296

Query: 161  PGSVIG----KVEAADGDK--GDRVTLSLRGPYEK---MFSINDS-GHISIVDLSALNTS 210
              SVIG    +V A D D      ++  L G   K    F ++ S G IS+  L  L+  
Sbjct: 2297 EASVIGTSVVQVRATDSDSEPNRGISYQLFGNLSKSHDHFHVDSSTGLISL--LRTLDYE 2354

Query: 211  TIQ---LVVVATDTGNPPRQASV 230
              Q   + V A D G PP  + V
Sbjct: 2355 QSQRHTIFVRAVDGGMPPLSSDV 2377



 Score = 54.7 bits (130), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 59/244 (24%), Positives = 104/244 (42%), Gaps = 40/244 (16%)

Query: 4    EDDFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYV 63
            E++F    T  VRA+   +  + ++  + V       +  +FS+  Y+ +  E++P+   
Sbjct: 2668 ENEFF---TFFVRAVDNGSPSKESVVPVYVKILPPETQLPKFSEPFYTYTVSEDVPIGTE 2724

Query: 64   LLTVTTNKPRDLRVKYWLSN----DYGERFSISRQ-GDISLMQCLDYETEDSYRFTVYAT 118
            +  +       +       N    +  E F I RQ G + L + LD+E    Y+F+V A 
Sbjct: 2725 IDLIRAEHSGTVLYSLVKGNTPESNRDESFVIDRQSGRLKLEKSLDHEITKWYQFSVLAR 2784

Query: 119  ----DTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGD 174
                D  M  S  V+I V + ND  P F    YE F+    + +L  GS + ++ A+D D
Sbjct: 2785 CTQDDREMVASVDVSIQVKDANDNSPVFESSPYEAFI----VENLPGGSRVIQIRASDAD 2840

Query: 175  KGDRVTLSLRGPYEKMFSINDSGHISIVDLSALNTST----------------IQLVVVA 218
             G    +        M+S++ S  + +++  A+N  T                 Q+ VVA
Sbjct: 2841 SGTNSQV--------MYSLDQSQSVEVIESFAINMETGWITTLKELDHEERDNYQIKVVA 2892

Query: 219  TDTG 222
            +D G
Sbjct: 2893 SDHG 2896



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 61/215 (28%), Positives = 102/215 (47%), Gaps = 21/215 (9%)

Query: 27   ALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLS---- 82
            A  T++VS    +     F   EY  +  E++ V   +L V     RD+     ++    
Sbjct: 3215 ATGTVVVSVLDINDNPPVFEYREYGATVSEDILVGTEVLQVYAAS-RDIEANAEITYSII 3273

Query: 83   --NDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVN 136
              N++G +FSI S+ G + +++ LDYE+   Y  T+ ATD     ++  ATVN++V +VN
Sbjct: 3274 SGNEHG-KFSIDSKTGAVFIIENLDYESSHEYYLTIEATDGGTPSLSDVATVNVNVTDVN 3332

Query: 137  DWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS-LRGPYEKMFSIND 195
            D  P F    Y   +    + + +  +V+   + ADG     +  S + G     F+I+ 
Sbjct: 3333 DNAPVFSQDTYTAVVSEDAVLEQSVITVLA--DDADGPSNSHIHYSIIDGNQGGPFTIDP 3390

Query: 196  -SGHISIVDLSALNTSTIQ---LVVVATDTGNPPR 226
              G + +  L  L+  TI    L V A+D G+PPR
Sbjct: 3391 VRGEVKVTKL--LDRETISGYTLTVQASDNGSPPR 3423



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 60/225 (26%), Positives = 108/225 (48%), Gaps = 19/225 (8%)

Query: 13   LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVT---T 69
            L+VRA   D   R+  A+++++    +    +FS + Y+++  EN     +L  V     
Sbjct: 3098 LLVRAT--DRGGRFCQASIVLTLEDVNDNAPEFSADPYAITVFENTEPGTLLTRVQATDA 3155

Query: 70   NKPRDLRVKYWLSNDYGERFSISR-QGDISLMQCLDYETEDSYRFTVYATDT----LMTT 124
            +   + ++ Y L +    +FSI+   G I L + LD E +  Y  ++ A D      +T 
Sbjct: 3156 DSGLNRKILYSLIDSADGQFSINELSGIIQLEKPLDRELQAVYTLSLKAVDQGLPRRLTA 3215

Query: 125  SATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAA--DGDKGDRVTLS 182
            + TV +SV+++ND  P F Y +Y   +      D+  G+ + +V AA  D +    +T S
Sbjct: 3216 TGTVVVSVLDINDNPPVFEYREYGATVSE----DILVGTEVLQVYAASRDIEANAEITYS 3271

Query: 183  -LRGPYEKMFSIND-SGHISIVD-LSALNTSTIQLVVVATDTGNP 224
             + G     FSI+  +G + I++ L   ++    L + ATD G P
Sbjct: 3272 IISGNEHGKFSIDSKTGAVFIIENLDYESSHEYYLTIEATDGGTP 3316



 Score = 45.1 bits (105), Expect = 0.067,   Method: Compositional matrix adjust.
 Identities = 55/195 (28%), Positives = 87/195 (44%), Gaps = 20/195 (10%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTTNKPRDL----RVKYWLSNDYGERFSI-SRQGDIS 98
            +F +  Y V   E+  V+  ++ V     +DL     V Y +  D  ++FSI S  G + 
Sbjct: 821  EFLQESYFVEVSEDKEVHSEIIQVEATD-KDLGPNGHVTYSILTD-TDKFSIDSATGVVK 878

Query: 99   LMQCLDYETEDSYRFTVYATDTL-----MTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
            +M  LD E +  +   + A D       + ++  + +S+ +VND  P+F  P Y + +  
Sbjct: 879  IMHPLDRELQHEHYLKIEARDQAREEPQLFSTVVLKVSLEDVNDNPPKFIPPNYRVKV-- 936

Query: 154  IPLADLTPGSVIGKVEAADGD--KGDRVTLSLRGPYEKMFSIND-SGHISIV-DLSALNT 209
                DL  G+VI  +EA D D  +  +V  SL    E  F ++  SG + IV  L     
Sbjct: 937  --REDLPEGTVIMWLEAHDPDLAQSGQVRYSLMDHGEGNFDVDKLSGAVRIVQQLDFEKK 994

Query: 210  STIQLVVVATDTGNP 224
                L V A D G P
Sbjct: 995  QVYNLTVRAKDKGKP 1009



 Score = 40.8 bits (94), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 54/215 (25%), Positives = 88/215 (40%), Gaps = 19/215 (8%)

Query: 24  DRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLR---VKYW 80
           DR A   ++V   G +    +F++  Y  +  EN+P+   +++++   P +     V Y 
Sbjct: 442 DRKASTKVLVKVLGANSNPPEFTQTAYKAAFDENVPIGTTVMSLSAVDPDEGENGYVTYS 501

Query: 81  LSNDYGERFSISR-QGDISLMQCLDYE-TEDSYRFTVYATDTLM----TTSATVNISVVN 134
           ++N     F I    G +S  + LDYE     Y   + A+D  +           I++ N
Sbjct: 502 ITNLNHVPFVIDHFTGAVSTSENLDYELMPRVYTLRIRASDWGLPYRREAEVLATITLNN 561

Query: 135 VNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYE-KMFSI 193
           +ND  P F     E  +P     DL  G  I  V A D D+   V   +    E  +FS+
Sbjct: 562 LNDNTPLFEKINCEGTIPR----DLGVGEQITTVSAIDADELQLVQYQIEAGNELDLFSL 617

Query: 194 NDSGHI-----SIVDLSALNTSTIQLVVVATDTGN 223
           N    +     S++D      S   L + ATD  N
Sbjct: 618 NPHSGVLSLKQSLMDGLGAKVSFHSLRITATDGEN 652



 Score = 40.0 bits (92), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 52/191 (27%), Positives = 86/191 (45%), Gaps = 30/191 (15%)

Query: 56   ENLPVNYVLLTVTTNKP---RDLRVKYWLSNDYG-ERFSISRQ-GDISLMQCLDYETEDS 110
            E+ PV  +++TV+ +     RD  ++Y + +  G   F I  + G I     LD E+   
Sbjct: 1045 EDAPVGSLVMTVSAHDEDAGRDGEIRYSIRDGSGVGVFKIGEETGIIETSDRLDRESTSH 1104

Query: 111  YRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSV-IG 166
            Y  TV+ATD     +++   + I V +VND  P+   P   ++ P I   + +P  V + 
Sbjct: 1105 YWLTVFATDQGVVPLSSFIEIYIEVEDVNDNAPQTSEP---VYYPEI--LENSPKDVSVV 1159

Query: 167  KVEAADGDKGDRVTLSLRGPYEKMFSINDSGHISIVDLSALNTSTIQ-----------LV 215
            ++EA D D      L  R     + S N  G  ++   + L T+T +           L 
Sbjct: 1160 QIEAFDPDLSSNDKLVYR-----ITSGNPQGFFAVHPKTGLITTTSRKLDREQQDEHILE 1214

Query: 216  VVATDTGNPPR 226
            V  TD G+PP+
Sbjct: 1215 VTVTDNGSPPK 1225



 Score = 38.9 bits (89), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 40/161 (24%), Positives = 74/161 (45%), Gaps = 12/161 (7%)

Query: 45   FSKNEYSVSALENLPVNY-VLLTVTTNKPRDLR----VKYWLSNDYGERFSISRQGDISL 99
            FS+  YSV   EN PV + VL  V T++         V   ++ +  + F +++QG +  
Sbjct: 3443 FSRGNYSVIIQENKPVGFSVLRLVVTDEDSSHNGPPFVFTIVTGNDEKAFEVNQQGVLLT 3502

Query: 100  MQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
               +  + +D +   V   D     +++   ++I V+  + + P       E+F+     
Sbjct: 3503 ASAIKRKEKDHFLLQVKVADNGKPQLSSLTYIDIRVIEESIYPPAIL--PLEIFI--TAS 3558

Query: 157  ADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSG 197
             +   G VIGK+ A D D  D +T SL    + +FS++ +G
Sbjct: 3559 GEEYSGGVIGKIHATDQDVYDTLTYSLDPQMDNLFSVSSTG 3599



 Score = 38.9 bits (89), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 39/128 (30%), Positives = 56/128 (43%), Gaps = 21/128 (16%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDLR------------VKYWLSNDYGERFSI- 91
            F + EY+    E+  +N V+LT   N P  +R            V + +     + F+I 
Sbjct: 1768 FMQAEYTGLISESASINSVVLT-DRNVPLVIRAADADKDSNALLVYHIVEPSVHKYFAID 1826

Query: 92   SRQGDISLMQCLDYETEDSYRFTVYATDT-----LMTTSATVNISVVNVNDWDPRFRYPQ 146
            S  G I  +  LDYE   ++ FTV   D          +A V I V+++ND  P F  P 
Sbjct: 1827 SSTGAIHTVLSLDYEETSTFHFTVQVHDMGTPRLFAEYAANVTIHVIDINDCPPVFAKPL 1886

Query: 147  YE--LFLP 152
            YE  L LP
Sbjct: 1887 YEASLLLP 1894



 Score = 38.1 bits (87), Expect = 7.2,   Method: Compositional matrix adjust.
 Identities = 40/129 (31%), Positives = 56/129 (43%), Gaps = 14/129 (10%)

Query: 92   SRQGDISLMQCLDYETEDSYRFTVYATDTLM---TTSATVNISVVNVNDWDPRFRYPQYE 148
            S  G ISL++ LDYE    +   V A D  M   ++   V + V ++ND  P F    YE
Sbjct: 2340 SSTGLISLLRTLDYEQSQRHTIFVRAVDGGMPPLSSDVIVTVDVTDLNDNPPLFEQQIYE 2399

Query: 149  LFL-PHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSINDSGHISIVDL 204
              +  H P      G  +  V+A D D  D   L    L G   K F I+ +    I+ L
Sbjct: 2400 ARISEHAPH-----GHFVTCVKAYDADSSDIDKLQYSILSGNDHKHFIIDSA--TGIITL 2452

Query: 205  SALNTSTIQ 213
            S L   T++
Sbjct: 2453 SNLRRHTLK 2461


>gi|344275017|ref|XP_003409310.1| PREDICTED: protocadherin-15 isoform 4 [Loxodonta africana]
          Length = 1869

 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 69/264 (26%), Positives = 122/264 (46%), Gaps = 29/264 (10%)

Query: 6   DFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVL- 64
           DF Q   LV++A Q +     A A+L +     + +   F+   Y    LE+ PV   + 
Sbjct: 356 DFHQKFDLVIKAEQDNGHPLPAFASLHIEILDENNQSPYFTMPAYQGYILESAPVGSTIS 415

Query: 65  --LTVTT-----------NKPRDLRVKYWLSNDYGERFSISRQG---DISLMQCLDYETE 108
             L +TT              +D  V  +L NDY   F++++ G    ++L+Q +D E +
Sbjct: 416 DSLNLTTPLRIIVLDKDVEDTKDPEVHLFL-NDYTSVFTVTQTGITRYLTLLQPVDREEQ 474

Query: 109 DSYRFTVYATDTLMTTSAT-VNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGK 167
            +Y F++ A D +  +    VNI V++ ND  P F    YE+++      D++PG  + +
Sbjct: 475 QTYTFSITAFDGVQESEPVIVNIQVMDANDNTPTFPEISYEVYV----YTDMSPGDSVIQ 530

Query: 168 VEAADGDKGD--RVTLSLRGPYEKMFSIND-SGHISIV-DLSALNTSTIQLVVVATDTGN 223
           + A D D+G    +T  +    +  F IN  +G I+I   +  +   T  L V A D  N
Sbjct: 531 LTAVDADEGSNGEITYEILVGDQGDFIINKTTGLITIAPGVELIVGRTYALTVQAAD--N 588

Query: 224 PPRQASVPAIMHFPEAIVQQASSK 247
           PP       I+   +A+ ++++ +
Sbjct: 589 PPPAERSTGILTLGKALDRESTDR 612



 Score = 48.9 bits (115), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 70/233 (30%), Positives = 102/233 (43%), Gaps = 26/233 (11%)

Query: 13  LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKP 72
           LVV A       R++  TL +           F+ + Y+V   ENLP     L +   K 
Sbjct: 716 LVVVATDGAVHPRHSTLTLAIKVLDIDDNSPVFTNSTYTVVVEENLPAGTTFLKIEA-KD 774

Query: 73  RDL--RVKYWLSNDYGERFSISR--QGDISLMQCLDYET----EDSYRFTVYATD---TL 121
            DL   V Y + +   + F       G++SL++ LDYE     E +  F V A D   T+
Sbjct: 775 VDLGANVSYRIRSPEVKHFFALHPFTGELSLLRSLDYEAFPEQEATITFLVEAFDIYGTM 834

Query: 122 MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDK----GD 177
               ATV + V ++ND+ P F    Y+  +      D   G+ I  V A D D       
Sbjct: 835 PPGIATVTVIVKDMNDYPPVFNKRIYKGMV----APDAVKGTPITTVYAEDADPPGLPAS 890

Query: 178 RVTL---SLRGPY-EKMFSI-NDSGH-ISIVDLSALNTSTIQLVVVATDTGNP 224
           RV      ++ PY   +F +  DSG  I+ V+L+   T+  +LVVVA D G P
Sbjct: 891 RVRYRVDDVQFPYPASIFDVVEDSGLVITRVNLNEEPTTIFKLVVVAFDDGEP 943



 Score = 45.8 bits (107), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 50/171 (29%), Positives = 80/171 (46%), Gaps = 17/171 (9%)

Query: 76  RVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDTLMT---TSATVNISV 132
           +V Y L N +   F I+  G I     L+ E  D Y   V ATD  +    ++ T+ I V
Sbjct: 680 QVHYSLGN-FNNLFRITSNGSIYTAVKLNREVRDYYELVVVATDGAVHPRHSTLTLAIKV 738

Query: 133 VNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEK-MF 191
           ++++D  P F    Y + +      +L  G+   K+EA D D G  V+  +R P  K  F
Sbjct: 739 LDIDDNSPVFTNSTYTVVVEE----NLPAGTTFLKIEAKDVDLGANVSYRIRSPEVKHFF 794

Query: 192 SIND-SGHISI---VDLSAL--NTSTIQLVVVATDTGN--PPRQASVPAIM 234
           +++  +G +S+   +D  A     +TI  +V A D     PP  A+V  I+
Sbjct: 795 ALHPFTGELSLLRSLDYEAFPEQEATITFLVEAFDIYGTMPPGIATVTVIV 845



 Score = 39.3 bits (90), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 41/140 (29%), Positives = 71/140 (50%), Gaps = 8/140 (5%)

Query: 95  GDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLP-H 153
           G ++L + LD E+ D Y   V A+D     ++T  ++VV  +        P ++ +LP +
Sbjct: 597 GILTLGKALDRESTDRYILIVTASDGRPDGTSTATVNVVVTDV---NDNAPVFDPYLPRN 653

Query: 154 IPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDSGHI-SIVDLSALNTS 210
           + + +    + +G+V A D D G   +V  SL G +  +F I  +G I + V L+     
Sbjct: 654 LSVVEEEANAFVGQVRATDPDAGINGQVHYSL-GNFNNLFRITSNGSIYTAVKLNREVRD 712

Query: 211 TIQLVVVATDTGNPPRQASV 230
             +LVVVATD    PR +++
Sbjct: 713 YYELVVVATDGAVHPRHSTL 732


>gi|344265074|ref|XP_003404612.1| PREDICTED: protocadherin gamma-A2-like [Loxodonta africana]
          Length = 810

 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 57/194 (29%), Positives = 87/194 (44%), Gaps = 17/194 (8%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVT---TNKPRDLRVKYWLSNDYGERFSI----SRQGDI 97
           FS+ EY VS  EN+PV   +LTVT    ++  + ++ Y+     GE   +    S  GDI
Sbjct: 242 FSQPEYRVSVPENMPVGTRILTVTATDADEGYNAQIAYFPEKKPGETSEVFELKSTSGDI 301

Query: 98  SLMQCLDYETEDSYRFTVYATDTL-MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
            +++ LDYE    +   + A D   + T   V ++V++VND  P F        +P    
Sbjct: 302 VIIKTLDYEDAKFHEIDIEAQDGPGLLTRTKVIVAVLDVNDNAPEFYMTSATSSVPE--- 358

Query: 157 ADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDS--GHISIVDLSALNT---ST 211
            D   G+VI      D D G    ++   P    F +  S   +  +V    L+    S+
Sbjct: 359 -DSPQGTVIALFNVHDRDSGQNAFITCSLPESLPFQLERSVDNYYRLVTTKPLDREQISS 417

Query: 212 IQLVVVATDTGNPP 225
             + V ATD GNPP
Sbjct: 418 YNITVTATDGGNPP 431



 Score = 46.2 bits (108), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 46/136 (33%), Positives = 63/136 (46%), Gaps = 17/136 (12%)

Query: 103 LDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADL 159
           LD E   SY  TV ATD     ++T A V + V ++ND  P F +  Y  ++P   L   
Sbjct: 410 LDREQISSYNITVTATDGGNPPLSTDAQVLLQVADINDNPPAFPHASYSAYIPENNLR-- 467

Query: 160 TPGSVIGKVEAADGDKGD--RVTLSLR------GPYEKMFSIN-DSGHI-SIVDLSALNT 209
             G+ I  V A D D  D  +VT SL        P     SIN D+G + ++        
Sbjct: 468 --GASIFSVTAHDPDSEDNAQVTYSLAEETIQGAPVSSYVSINSDTGVLYALRSFDFEQF 525

Query: 210 STIQLVVVATDTGNPP 225
             +QL V A D+G+PP
Sbjct: 526 RDLQLWVTAKDSGDPP 541


>gi|410926011|ref|XP_003976472.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 1-like
           [Takifugu rubripes]
          Length = 2876

 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 64/217 (29%), Positives = 104/217 (47%), Gaps = 20/217 (9%)

Query: 25  RYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWL 81
           R A + L V+ + T+     F + EY VS  EN+ V + ++T+     + P +  + Y +
Sbjct: 172 RAATSYLTVTVSDTNDHSPVFEQIEYRVSIRENVEVGFEVMTIRATDGDAPSNANMIYKI 231

Query: 82  SNDYG--ERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDTL-----MTTSATVNISVV 133
            ND G    F I SR G + + +  D ET D Y+  V A D        + +ATVNISV 
Sbjct: 232 VNDDGVSSIFEIDSRNGLVRIRERPDRETRDQYQLIVEANDQGKDPGPRSATATVNISVE 291

Query: 134 NVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKM 190
           + ND  P+F   +Y + +P     ++   + I +VEA D D+G+   +    + G  +  
Sbjct: 292 DENDNYPQFSEKRYVVQVPE----NVAVNTKIVQVEATDKDEGNNAKVHYSIISGNIKGQ 347

Query: 191 FSIND-SGHISIVD-LSALNTSTIQLVVVATDTGNPP 225
           F I+  +G I +++ L         L + A D G PP
Sbjct: 348 FYIHSPTGVIDVINPLDYEMIREYNLRIKAQDGGRPP 384



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 58/211 (27%), Positives = 101/211 (47%), Gaps = 21/211 (9%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRDLR--VKYWLSN-DYGERFSISRQ---GDIS 98
           F++  YS+   E+  V   +LTVT    RD+   V Y +S+ +   RF+I+ Q   G I+
Sbjct: 511 FTEKVYSLKINEDAIVGTSVLTVTAVD-RDVNSVVTYQISSGNTRNRFAITSQSGGGLIT 569

Query: 99  LMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLAD 158
           L   LDY+ E  Y  ++ A+D     +A V I+V + N   P F+   Y+     + L +
Sbjct: 570 LALPLDYKQERQYVLSIAASDGTRYDTAQVFINVTDANTHRPVFQSANYQ-----VTLGE 624

Query: 159 LTP-GSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSINDSGHISI-VDLSALNTSTIQL 214
             P G  +  + A D D G+  R+T  +     +     D+G I+  +++   + ++  L
Sbjct: 625 EKPVGHTVALISATDEDTGENARITYVMEDNVPQFKIDPDTGAITTQMEIDYEDQASYTL 684

Query: 215 VVVATDTGNPPRQASVPAIMHFPEAIVQQAS 245
            ++A D G P +  +      + E IVQ A+
Sbjct: 685 AIIARDNGIPQKSDTT-----YVEIIVQDAN 710



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 41/142 (28%), Positives = 69/142 (48%), Gaps = 9/142 (6%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKP---RDLRVKYWL-SNDYGERFSIS-RQGDISL 99
           F K+   +   EN PV  V+  +T   P    + ++ Y +   +  E F +    GD++ 
Sbjct: 822 FEKDVLFIDVEENSPVGSVVARITATDPDEGSNAQIMYQIVEGNIPEVFQLDIFNGDLTA 881

Query: 100 MQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPH--IPLA 157
           +  LDYET   Y   V AT   + + ATV+I +V++ND  P  +   +E+   +     +
Sbjct: 882 LTDLDYETRKEYVIVVQATSAPLVSRATVHIRLVDLNDNQPVLQ--NFEIIFNNYVTNKS 939

Query: 158 DLTPGSVIGKVEAADGDKGDRV 179
           +  P  +IGKV A D D  D++
Sbjct: 940 NSFPSGIIGKVPAHDPDVSDKL 961



 Score = 48.9 bits (115), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 56/219 (25%), Positives = 91/219 (41%), Gaps = 41/219 (18%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTTNKPRDL---RVKYWL-------SNDYGERFSISR 93
           QF    Y VS  EN P    ++T+    P D    R++Y +       SND+   F+I  
Sbjct: 83  QFQLPNYQVSVPENEPAGTRVITLKATDPDDGEAGRLEYSMEALFDSRSNDF---FNIDS 139

Query: 94  Q-GDISLMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYEL 149
           Q G I+ +Q LD E +D++ F V  TD        ++ + ++V + ND  P F   +Y +
Sbjct: 140 QTGSITTIQPLDREIKDTHVFKVTVTDHGSPKRAATSYLTVTVSDTNDHSPVFEQIEYRV 199

Query: 150 FLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSGHISIVDLSALN- 208
            +      ++  G  +  + A DGD      +  +        +ND G  SI ++ + N 
Sbjct: 200 SI----RENVEVGFEVMTIRATDGDAPSNANMIYK-------IVNDDGVSSIFEIDSRNG 248

Query: 209 ------------TSTIQLVVVATDTGNPPRQASVPAIMH 235
                           QL+V A D G  P   S  A ++
Sbjct: 249 LVRIRERPDRETRDQYQLIVEANDQGKDPGPRSATATVN 287



 Score = 45.4 bits (106), Expect = 0.051,   Method: Compositional matrix adjust.
 Identities = 48/170 (28%), Positives = 80/170 (47%), Gaps = 13/170 (7%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSN-DYGERFSISRQ-GDISL 99
           F    +  + LEN+P+ Y ++ +     +   + R++Y L +   G  F ++   G I++
Sbjct: 406 FVSTPFQATVLENVPIGYSVIHIQAIDGDSGENARLEYRLIDITPGFPFVVNNSTGWITV 465

Query: 100 MQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
              LD ET D Y F V A D    +M++SA+V+I+V++VND  P F    Y L +     
Sbjct: 466 SDELDRETTDFYTFGVEARDHGVPVMSSSASVSITVLDVNDNVPAFTEKVYSLKINE--- 522

Query: 157 ADLTPGSVIGKVEAADGDKGDRVTLSL-RGPYEKMFSINDSGHISIVDLS 205
            D   G+ +  V A D D    VT  +  G     F+I       ++ L+
Sbjct: 523 -DAIVGTSVLTVTAVDRDVNSVVTYQISSGNTRNRFAITSQSGGGLITLA 571


>gi|119625019|gb|EAX04614.1| FAT tumor suppressor homolog 1 (Drosophila), isoform CRA_a [Homo
            sapiens]
          Length = 3377

 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 41/156 (26%), Positives = 78/156 (50%), Gaps = 11/156 (7%)

Query: 33   VSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWL---SNDYGERF 89
            +SK   SL  + F ++ ++ + +E+ PV +++  ++   P    +  W      +Y   F
Sbjct: 1346 ISKPKPSLEPISFEESFFTFTVMESDPVAHMIGVISVEPPG---IPLWFDITGGNYDSHF 1402

Query: 90   SISR-QGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYE 148
             + +  G I + + LD E + +Y  TV ATD   T    V I V++ ND  P+F   +YE
Sbjct: 1403 DVDKGTGTIIVAKPLDAEQKSNYNLTVEATDGTTTILTQVFIKVIDTNDHRPQFSTSKYE 1462

Query: 149  LFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR 184
            + +P     D  P + I ++ A D D+ +++  +L+
Sbjct: 1463 VVIPE----DTAPETEILQISAVDQDEKNKLIYTLQ 1494



 Score = 61.2 bits (147), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 65/227 (28%), Positives = 107/227 (47%), Gaps = 25/227 (11%)

Query: 33   VSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTV-TTNKPRDL--RVKYWLSNDYG-ER 88
            V+  G +L    F +NEY V   EN P++ +++ V TT+    +   V Y + ND+  +R
Sbjct: 2480 VTVIGGNLHSPAFLQNEYEVELAENAPLHTLVMEVKTTDGDSGIYGHVTYHIVNDFAKDR 2539

Query: 89   FSISRQGDISLMQCLDYET--EDSYRFTVYATDTLMTTS-ATVNISVVNVNDWDPRFRYP 145
            F I+ +G I  ++ LD ET  E      + A D     +  TVN+ + + ND  P+FR  
Sbjct: 2540 FYINERGQIFTLEKLDRETPAEKVISVRLMAKDAGGKVAFCTVNVILTDDNDNAPQFRAT 2599

Query: 146  QYELFLPHIPLADLTPGSVIGKVEAADGDKGDR--VTLSLRGPYEKM---FSIND-SGHI 199
            +YE+ +     +    G+ + KV A+D D+G    +T ++    E +     IN  SG I
Sbjct: 2600 KYEVNIG----SSAAKGTSVVKVLASDADEGSNADITYAIEADSESVKENLEINKLSGVI 2655

Query: 200  SIVD-LSALNTSTIQLVVVATDTGNPPRQASV-------PAIMHFPE 238
            +  + L  L        V A D G+P +++ V       P  M  P+
Sbjct: 2656 TTKESLIGLENEFFTFFVRAVDNGSPSKESVVLVYVKILPPEMQLPK 2702



 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 59/244 (24%), Positives = 106/244 (43%), Gaps = 40/244 (16%)

Query: 4    EDDFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYV 63
            E++F    T  VRA+   +  + ++  + V      ++  +FS+  Y+ +  E++P+   
Sbjct: 2665 ENEFF---TFFVRAVDNGSPSKESVVLVYVKILPPEMQLPKFSEPFYTFTVSEDVPIGTE 2721

Query: 64   LLTVTTNKPRDLRVKYWLSN----DYGERFSISRQ-GDISLMQCLDYETEDSYRFTVYAT 118
            +  +       +       N    +  E F I RQ G + L + LD+ET   Y+F++ A 
Sbjct: 2722 IDLIRAEHSGTVLYSLVKGNTPESNRDESFVIDRQSGRLKLEKSLDHETTKWYQFSILAR 2781

Query: 119  ----DTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGD 174
                D  M  S  V+I V + ND  P F    YE F+    + +L  GS + ++ A+D D
Sbjct: 2782 CTQDDHEMVASVDVSIQVKDANDNSPVFESSPYEAFI----VENLPGGSRVIQIRASDAD 2837

Query: 175  KGDRVTLSLRGPYEKMFSINDSGHISIVDLSALNTST----------------IQLVVVA 218
             G    +        M+S++ S  + +++  A+N  T                 Q+ VVA
Sbjct: 2838 SGTNGQV--------MYSLDQSQSVEVIESFAINMETGWITTLKELDHEKRDNYQIKVVA 2889

Query: 219  TDTG 222
            +D G
Sbjct: 2890 SDHG 2893



 Score = 54.3 bits (129), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 42/145 (28%), Positives = 68/145 (46%), Gaps = 8/145 (5%)

Query: 90   SISRQGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYEL 149
            +I  +  + + + LD E  D+Y  T+ ATD   ++ A V + V++ ND  P      Y  
Sbjct: 2971 TIQNEWKVYVKKPLDREKRDNYLLTITATDGTFSSKAIVEVKVLDANDNSPVCEKTLYSD 3030

Query: 150  FLPHIPLADLTPGSVIGKVEAADGD--KGDRVTLSLRGPYEKMFSIN-DSGHISI-VDLS 205
             +P     D+ PG +I ++ A D D      +T +L G   + F +N D+G +     L 
Sbjct: 3031 TIPE----DVLPGKLIMQISATDADIRSNAEITYTLLGSGAEKFKLNPDTGELKTSTPLD 3086

Query: 206  ALNTSTIQLVVVATDTGNPPRQASV 230
                +   L+V ATD G    QAS+
Sbjct: 3087 REEQAVYHLLVRATDGGGRFCQASI 3111



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 61/225 (27%), Positives = 108/225 (48%), Gaps = 19/225 (8%)

Query: 13   LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVT---T 69
            L+VRA   D   R+  A+++++    +    +FS + Y+++  EN     +L  V     
Sbjct: 3095 LLVRAT--DGGGRFCQASIVLTLEDVNDNAPEFSADPYAITVFENTEPGTLLTRVQATDA 3152

Query: 70   NKPRDLRVKYWLSNDYGERFSISR-QGDISLMQCLDYETEDSYRFTVYATDT----LMTT 124
            +   + ++ Y L +    +FSI+   G I L + LD E +  Y  ++ A D      +T 
Sbjct: 3153 DAGLNRKILYSLIDSADGQFSINELSGIIQLEKPLDRELQAVYTLSLKAVDQGLPRRLTA 3212

Query: 125  SATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAA--DGDKGDRVTLS 182
            + TV +SV+++ND  P F Y +Y   +      D+  G+ + +V AA  D +    +T S
Sbjct: 3213 TGTVIVSVLDINDNPPVFEYREYGATVSE----DILVGTEVLQVYAASRDIEANAEITYS 3268

Query: 183  -LRGPYEKMFSIND-SGHISIVD-LSALNTSTIQLVVVATDTGNP 224
             + G     FSI+  +G + I++ L   ++    L V ATD G P
Sbjct: 3269 IISGNEHGKFSIDSKTGAVFIIENLDYESSHEYYLTVEATDGGTP 3313



 Score = 51.2 bits (121), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 77/162 (47%), Gaps = 21/162 (12%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSN-DYGERFSIS-RQGDISLMQC 102
            F K  YS    E++ V+  ++ V  N P  L+V Y +++ D   +F+I+   G I+++  
Sbjct: 2182 FEKPFYSAEIAESIQVHSPVVHVQANSPEGLKVFYSITDGDPFSQFTINFNTGVINVIAP 2241

Query: 103  LDYETEDSYRFTVYATDTLMTTSATVNISVV--NVNDWDPRFRYPQYELFLPHIPLADLT 160
            LD+E   +Y+ ++ ATD+L    A V + ++  ++ND  P F    Y +         L+
Sbjct: 2242 LDFEAHPAYKLSIRATDSLTGAHAEVFVDIIVDDINDNPPVFAQQSYAV--------TLS 2293

Query: 161  PGSVIG----KVEAADGDKGDRVTLSLRGPYEKMFSINDSGH 198
              SVIG    +V A D D         RG   +MF  +   H
Sbjct: 2294 EASVIGTSVVQVRATDSDSEPN-----RGISYQMFGNHSKSH 2330



 Score = 47.0 bits (110), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 41/131 (31%), Positives = 65/131 (49%), Gaps = 12/131 (9%)

Query: 27   ALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLS---- 82
            A  T+IVS    +     F   EY  +  E++ V   +L V     RD+     ++    
Sbjct: 3212 ATGTVIVSVLDINDNPPVFEYREYGATVSEDILVGTEVLQVYA-ASRDIEANAEITYSII 3270

Query: 83   --NDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVN 136
              N++G +FSI S+ G + +++ LDYE+   Y  TV ATD     ++  ATVN++V ++N
Sbjct: 3271 SGNEHG-KFSIDSKTGAVFIIENLDYESSHEYYLTVEATDGGTPSLSDVATVNVNVTDIN 3329

Query: 137  DWDPRFRYPQY 147
            D  P F    Y
Sbjct: 3330 DNTPVFSQDTY 3340



 Score = 42.7 bits (99), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 57/215 (26%), Positives = 93/215 (43%), Gaps = 19/215 (8%)

Query: 24  DRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLR---VKYW 80
           DR A   ++V   G +    +F++  Y  +  EN+P+   +++++   P +     V Y 
Sbjct: 442 DRKASTKVLVKVLGANSNPPEFTQTAYKAAFDENVPIGTTVMSLSAVDPDEGENGYVTYS 501

Query: 81  LSNDYGERFSISR-QGDISLMQCLDYE-TEDSYRFTVYATDTLMTTSATVN----ISVVN 134
           ++N     F+I    G +S  + LDYE     Y   + A+D  +     V     I++ N
Sbjct: 502 IANLNHVPFAIDHFTGAVSTSENLDYELMPRVYTLRIRASDWGLPYRREVEVLATITLNN 561

Query: 135 VNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYE-KMFSI 193
           +ND  P F     E  +P     DL  G  I  V A D D+   V   +    E  +FS+
Sbjct: 562 LNDNTPLFEKINCEGTIPR----DLGVGEQITTVSAIDADELQLVQYQIEAGNELDLFSL 617

Query: 194 N-DSGHI----SIVDLSALNTSTIQLVVVATDTGN 223
           N +SG +    S++D      S   L + ATD  N
Sbjct: 618 NPNSGVLSLKRSLMDGLGAKVSFHSLRITATDGEN 652



 Score = 42.4 bits (98), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 55/191 (28%), Positives = 85/191 (44%), Gaps = 30/191 (15%)

Query: 56   ENLPVNYVLLTVTTNKP---RDLRVKYWLSNDYG-ERFSISRQ-GDISLMQCLDYETEDS 110
            E+ PV  +++TV+ +     RD  ++Y + +  G   F I  + G I     LD E+   
Sbjct: 1045 EDAPVGSLVMTVSAHDEDAGRDGEIRYSIRDGSGVGVFKIGEETGVIETSDRLDRESTSH 1104

Query: 111  YRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSV-IG 166
            Y  TV+ATD     +++   + I V +VND  P+   P Y    P I   + +P  V + 
Sbjct: 1105 YWLTVFATDQGVVPLSSFIEIYIEVEDVNDNAPQTSEPVY---YPEI--MENSPKDVSVV 1159

Query: 167  KVEAADGDKGDRVTLSLRGPYEKMFSINDSGHISIVDLSALNTSTIQ-----------LV 215
            ++EA D D      L       K+ S N  G  SI   + L T+T +           L 
Sbjct: 1160 QIEAFDPDSSSNDKLMY-----KITSGNPQGFFSIHPKTGLITTTSRKLDREQQDEHILE 1214

Query: 216  VVATDTGNPPR 226
            V  TD G+PP+
Sbjct: 1215 VTVTDNGSPPK 1225



 Score = 41.6 bits (96), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 56/195 (28%), Positives = 86/195 (44%), Gaps = 20/195 (10%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTTNKPRDL----RVKYWLSNDYGERFSI-SRQGDIS 98
            +F +  Y V   E+  V+  ++ V     +DL     V Y +  D  + FSI S  G ++
Sbjct: 821  EFLQESYFVEVSEDKEVHSEIIQVEATD-KDLGPNGHVTYSILTD-TDTFSIDSVTGVVN 878

Query: 99   LMQCLDYETEDSYRFTVYATDTL-----MTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
            + + LD E +  +   + A D       + ++  V +S+ +VND  P F  P Y + +  
Sbjct: 879  IARPLDRELQHEHSLKIEARDQAREEPQLFSTVVVKVSLEDVNDNPPTFIPPNYRVKVRE 938

Query: 154  IPLADLTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSIND-SGHISIV-DLSALNT 209
                DL  G+VI  +EA D D G   +V  SL    E  F ++  SG + IV  L     
Sbjct: 939  ----DLPEGTVIMWLEAHDPDLGQSGQVRYSLLDHGEGNFDVDKLSGAVRIVQQLDFEKK 994

Query: 210  STIQLVVVATDTGNP 224
                L V A D G P
Sbjct: 995  QVYNLTVRAKDKGKP 1009



 Score = 37.7 bits (86), Expect = 8.6,   Method: Compositional matrix adjust.
 Identities = 40/129 (31%), Positives = 57/129 (44%), Gaps = 14/129 (10%)

Query: 92   SRQGDISLMQCLDYETEDSYRFTVYATDTLMTTSAT---VNISVVNVNDWDPRFRYPQYE 148
            S  G ISL++ LDYE    +   V A D  M T ++   V + V ++ND  P F    YE
Sbjct: 2337 SSTGLISLLRTLDYEQSRQHTIFVRAVDGGMPTLSSDVIVTVDVTDLNDNPPLFEQQIYE 2396

Query: 149  LFL-PHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSINDSGHISIVDL 204
              +  H P      G  +  V+A D D  D   L    L G   K F I+ +    I+ L
Sbjct: 2397 ARISEHAP-----HGHFVTCVKAYDADSSDIDKLQYSILSGNDHKHFVIDSA--TGIITL 2449

Query: 205  SALNTSTIQ 213
            S L+   ++
Sbjct: 2450 SNLHRHALK 2458


>gi|300798056|ref|NP_001178039.1| cadherin EGF LAG seven-pass G-type receptor 2 precursor [Rattus
           norvegicus]
 gi|149025694|gb|EDL81937.1| rCG28504 [Rattus norvegicus]
          Length = 2919

 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 67/219 (30%), Positives = 101/219 (46%), Gaps = 22/219 (10%)

Query: 25  RYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWL 81
           R ALATL +    T+  +  F + EY  S  ENL V Y +LTV     + P +  + Y L
Sbjct: 269 RSALATLTILVTDTNDHDPVFEQQEYKESLRENLEVGYEVLTVRATDGDAPPNANILYRL 328

Query: 82  SNDYG----ERFSIS-RQGDISLMQCLDYETEDSYRFTVYATDT-----LMTTSATVNIS 131
               G    E F I  R G I     +D E  +SY+  V A+D        +++A V +S
Sbjct: 329 LEGPGGSPSEVFEIDPRSGVIRTRGPVDREEVESYKLIVEASDQGRDPGPRSSTAVVFLS 388

Query: 132 VVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYE 188
           V + ND  P+F   +Y + +      D+TPG+ + +V A+D DKG    +    + G   
Sbjct: 389 VEDDNDNAPQFSEKRYVVQV----REDVTPGAPVLRVTASDRDKGSNALVHYSIMSGNAR 444

Query: 189 KMFSIN-DSGHISIVD-LSALNTSTIQLVVVATDTGNPP 225
             F ++  +G + +V  L    T    L + A D G PP
Sbjct: 445 GQFYLDAQTGALDVVSPLDYETTKEYTLRIRAQDGGRPP 483



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 49/171 (28%), Positives = 80/171 (46%), Gaps = 15/171 (8%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGERFSIS---RQGDIS 98
           F    +  + LE++P+ Y++L V     +   + R++Y L+   G  F  +     G IS
Sbjct: 505 FVSTPFQATVLESVPLGYLVLHVQAIDADAGENARLEYSLAG-VGHDFPFTINNGTGWIS 563

Query: 99  LMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIP 155
           +   LD E  D Y F V A D     +T SA+V++++++VND +P F  P+Y + L    
Sbjct: 564 VAAELDREEVDFYSFGVEARDHGTPALTASASVSVTILDVNDNNPTFTQPEYTVRLNE-- 621

Query: 156 LADLTPGSVIGKVEAADGDKGDRVTLSL-RGPYEKMFSINDSGHISIVDLS 205
             D   G+ +  V A D D    +T  +  G     FSI       +V L+
Sbjct: 622 --DAAVGTSVVTVSAVDRDAHSVITYQITSGNTRNRFSITSQSGGGLVSLA 670



 Score = 44.7 bits (104), Expect = 0.078,   Method: Compositional matrix adjust.
 Identities = 50/189 (26%), Positives = 86/189 (45%), Gaps = 14/189 (7%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRDLR--VKYWL-SNDYGERFSISRQ---GDIS 98
           F++ EY+V   E+  V   ++TV+    RD    + Y + S +   RFSI+ Q   G +S
Sbjct: 610 FTQPEYTVRLNEDAAVGTSVVTVSAVD-RDAHSVITYQITSGNTRNRFSITSQSGGGLVS 668

Query: 99  LMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLAD 158
           L   LDY+ E  Y   V A+D     +A + ++V + N   P F+   Y + +      D
Sbjct: 669 LALPLDYKLERQYVLAVTASDGTRQDTAQIVVNVTDANTHRPVFQSSHYTVNVNE----D 724

Query: 159 LTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSINDSGHISI-VDLSALNTSTIQLV 215
              G+ +  + A D D G+  R+T  +     +     D+G ++   +L   +  +  L 
Sbjct: 725 RPAGTTVVLISATDEDTGENARITYFMEDSIPQFRIDADTGAVTTQAELDYEDQVSYTLA 784

Query: 216 VVATDTGNP 224
           + A D G P
Sbjct: 785 ITARDNGIP 793



 Score = 44.3 bits (103), Expect = 0.096,   Method: Compositional matrix adjust.
 Identities = 40/149 (26%), Positives = 69/149 (46%), Gaps = 10/149 (6%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWL-SNDYGERFSIS-RQGDISL 99
            F ++E+ V   EN P+   +  VT   P +    ++ Y +   +  E F +    G+++ 
Sbjct: 921  FEQDEFDVFVEENSPIGLAVARVTATDPDEGTNAQIMYQIVEGNIPEVFQLDIFSGELTA 980

Query: 100  MQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPH--IPLA 157
            +  LDYE    Y   + AT   + + ATV++ +++ ND  P      +E+   +     +
Sbjct: 981  LVDLDYEDRPEYILVIQATSAPLVSRATVHVRLLDRNDNPPVLG--NFEILFNNYVTNRS 1038

Query: 158  DLTPGSVIGKVEAADGDKGDRVTLSL-RG 185
               PG  IG+V A D D  D +T S  RG
Sbjct: 1039 SSFPGGAIGRVPAHDPDISDSLTYSFERG 1067


>gi|355749714|gb|EHH54113.1| hypothetical protein EGM_14874 [Macaca fascicularis]
          Length = 4591

 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 42/157 (26%), Positives = 77/157 (49%), Gaps = 11/157 (7%)

Query: 33   VSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWL---SNDYGERF 89
            +SK   S   + F ++ ++ + +E+ PV +++  ++   P    +  W      +Y   F
Sbjct: 1346 ISKPKPSPEPISFEESFFTFTVMESDPVAHMIGVISVEPPG---IPLWFDITGGNYDSHF 1402

Query: 90   SISR-QGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYE 148
             + +  G I + + LD E + +Y  TV ATD   T    V I V++ ND  P+F   +YE
Sbjct: 1403 DVDKGTGTIIVAKPLDAEQKSNYNLTVEATDGTTTILTQVFIKVIDTNDHRPQFSTSKYE 1462

Query: 149  LFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRG 185
            + +P     D  P + I  + A D D+ +R+  +L+G
Sbjct: 1463 VVIPE----DTVPETEILHISAVDQDEKNRLIYTLQG 1495



 Score = 60.8 bits (146), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 63/213 (29%), Positives = 104/213 (48%), Gaps = 18/213 (8%)

Query: 33   VSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTV-TTNKPRDL--RVKYWLSNDYG-ER 88
            V+  G +L    F +NEY V   EN P++ +++ V TT+    +   V Y + ND+  +R
Sbjct: 2483 VTVIGGNLHSPAFLQNEYEVELAENAPLHTLVMEVKTTDGDSGIYGDVTYHIVNDFAKDR 2542

Query: 89   FSISRQGDISLMQCLDYET--EDSYRFTVYATDTLMTTS-ATVNISVVNVNDWDPRFRYP 145
            F I+ +G I  ++ LD ET  E      + A D     +  TVN+ + + ND  P+FR  
Sbjct: 2543 FYINERGQILTLEKLDRETPAEKVISVRLMAKDAGGKVAFCTVNVILTDDNDNAPQFRAT 2602

Query: 146  QYELFLPHIPLADLTPGSVIGKVEAADGDKGDR--VTLSLRGPYEKM---FSIND-SGHI 199
            +YE+ +     +    G+ + KV A+D D+G    VT ++    + +     IN  SG I
Sbjct: 2603 KYEVNIG----SSAAKGTSVIKVLASDADEGSNADVTYAIEADSDSVKENLEINKLSGVI 2658

Query: 200  SIVD-LSALNTSTIQLVVVATDTGNPPRQASVP 231
            +  + L  L        V A D G+P +++ VP
Sbjct: 2659 TTKESLIGLENEFFTFFVRAVDNGSPSKESVVP 2691



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 61/203 (30%), Positives = 96/203 (47%), Gaps = 27/203 (13%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSN-DYGERFSIS-RQGDISLMQC 102
            F K  YS    EN+ V+  ++ V  N P  L+V Y +++ D   +F+I+   G I+++  
Sbjct: 2185 FEKPFYSAEIAENVQVHSPVVHVQANSPEGLKVFYSITDGDPFSQFTINFNTGVINVIAP 2244

Query: 103  LDYETEDSYRFTVYATDTLMTTSATVNISVV--NVNDWDPRFRYPQYELFLPHIPLADLT 160
            LD+E   +Y+ ++ ATD+L    A V + ++  ++ND  P F    Y         A L+
Sbjct: 2245 LDFEAHPAYKLSIRATDSLTGAHAEVFVDIIVEDINDNAPVFAQQSY--------AATLS 2296

Query: 161  PGSVIG----KVEAADGDK--GDRVTLSLRGPYEK---MFSINDS-GHISIVDLSALNTS 210
              SVIG    +V A D D      ++  L G   K    F ++ S G IS+  L  L+  
Sbjct: 2297 EASVIGTSVVQVRATDADSEPNRGISYQLSGNLSKSHDHFHVDSSTGLISL--LRTLDYE 2354

Query: 211  TIQ---LVVVATDTGNPPRQASV 230
              Q   + V A D G PP  + V
Sbjct: 2355 QSQRHTIFVRAVDGGMPPLSSDV 2377



 Score = 55.8 bits (133), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 43/145 (29%), Positives = 69/145 (47%), Gaps = 8/145 (5%)

Query: 90   SISRQGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYEL 149
            +I  +  + + + LD E  D+Y  T+ ATD   ++ A V + V++ ND  P      Y  
Sbjct: 2974 NIQNEWKVYVKKPLDREKRDNYLLTITATDGTFSSKAIVEVKVLDANDNSPVCEKTLYSD 3033

Query: 150  FLPHIPLADLTPGSVIGKVEAADGD--KGDRVTLSLRGPYEKMFSIN-DSGHISI-VDLS 205
             +P     D+ PG +I ++ AAD D      +T +L G   + F +N D+G +     L 
Sbjct: 3034 TIPE----DVLPGKLIMQISAADADIRSNAEITYTLLGSGAEKFQLNPDTGELKTSAPLD 3089

Query: 206  ALNTSTIQLVVVATDTGNPPRQASV 230
                +   L+V ATD G    QAS+
Sbjct: 3090 REEQAVYHLLVRATDRGGRFCQASI 3114



 Score = 54.7 bits (130), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 58/244 (23%), Positives = 104/244 (42%), Gaps = 40/244 (16%)

Query: 4    EDDFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYV 63
            E++F    T  VRA+   +  + ++  + V       +  +FS+  Y+ +  E++P+   
Sbjct: 2668 ENEFF---TFFVRAVDNGSPSKESVVPVYVKILPPETQLPKFSEPFYTYTVSEDVPIGTE 2724

Query: 64   LLTVTTNKPRDLRVKYWLSN----DYGERFSISRQ-GDISLMQCLDYETEDSYRFTVYAT 118
            +  +       +       N    +  E F I RQ G + L + LD+E    Y+F++ A 
Sbjct: 2725 IDVIRAEHSGTVLYSLVKGNTPESNRDESFVIDRQSGRLKLEKSLDHEITKWYQFSILAR 2784

Query: 119  ----DTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGD 174
                D  M  S  V+I V + ND  P F    YE F+    + +L  GS + ++ A+D D
Sbjct: 2785 CTQDDREMVASVDVSIQVKDANDNSPVFESSPYEAFI----VENLPGGSRVIQIRASDAD 2840

Query: 175  KGDRVTLSLRGPYEKMFSINDSGHISIVDLSALNTST----------------IQLVVVA 218
             G    +        M+S++ S  + +++  A+N  T                 Q+ VVA
Sbjct: 2841 SGTNSQV--------MYSLDQSQSVEVIESFAINMETGWITTLKELDHEERDNYQIKVVA 2892

Query: 219  TDTG 222
            +D G
Sbjct: 2893 SDHG 2896



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 61/215 (28%), Positives = 102/215 (47%), Gaps = 21/215 (9%)

Query: 27   ALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLS---- 82
            A  T++VS    +     F   EY  +  E++ V   +L V     RD+     ++    
Sbjct: 3215 ATGTVVVSVLDINDNPPVFEYREYGATVSEDILVGTEVLQVYAAS-RDIEANAEITYSII 3273

Query: 83   --NDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVN 136
              N++G +FSI S+ G + +++ LDYE+   Y  T+ ATD     ++  ATVN++V +VN
Sbjct: 3274 SGNEHG-KFSIDSKTGAVFIIENLDYESSHEYYLTIEATDGGTPSLSDVATVNVNVTDVN 3332

Query: 137  DWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS-LRGPYEKMFSIND 195
            D  P F    Y   +    + + +  +V+   + ADG     +  S + G     F+I+ 
Sbjct: 3333 DNAPVFSQDTYTAVVSEDAVLEQSVITVLA--DDADGPSNSHIHYSIIDGNQGGPFTIDP 3390

Query: 196  -SGHISIVDLSALNTSTIQ---LVVVATDTGNPPR 226
              G + +  L  L+  TI    L V A+D G+PPR
Sbjct: 3391 VRGEVKVTKL--LDRETISGYTLTVQASDNGSPPR 3423



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 60/225 (26%), Positives = 108/225 (48%), Gaps = 19/225 (8%)

Query: 13   LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVT---T 69
            L+VRA   D   R+  A+++++    +    +FS + Y+++  EN     +L  V     
Sbjct: 3098 LLVRAT--DRGGRFCQASIVLALEDVNDNAPEFSADPYAITVFENTEPGTLLTRVQATDA 3155

Query: 70   NKPRDLRVKYWLSNDYGERFSISR-QGDISLMQCLDYETEDSYRFTVYATDT----LMTT 124
            +   + ++ Y L +    +FSI+   G I L + LD E +  Y  ++ A D      +T 
Sbjct: 3156 DSGLNRKILYSLIDSADGQFSINELSGIIQLEKPLDRELQAVYTLSLKAVDQGLPRRLTA 3215

Query: 125  SATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAA--DGDKGDRVTLS 182
            + TV +SV+++ND  P F Y +Y   +      D+  G+ + +V AA  D +    +T S
Sbjct: 3216 TGTVVVSVLDINDNPPVFEYREYGATVSE----DILVGTEVLQVYAASRDIEANAEITYS 3271

Query: 183  -LRGPYEKMFSIND-SGHISIVD-LSALNTSTIQLVVVATDTGNP 224
             + G     FSI+  +G + I++ L   ++    L + ATD G P
Sbjct: 3272 IISGNEHGKFSIDSKTGAVFIIENLDYESSHEYYLTIEATDGGTP 3316



 Score = 43.5 bits (101), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 55/195 (28%), Positives = 86/195 (44%), Gaps = 20/195 (10%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTTNKPRDL----RVKYWLSNDYGERFSI-SRQGDIS 98
            +F +  Y V   E+  V+  ++ V     +DL     V Y +  D  ++FSI S  G + 
Sbjct: 821  EFLQESYFVEVSEDKEVHSEIIQVEATD-KDLGPNGHVTYSILTD-TDKFSIDSATGVVK 878

Query: 99   LMQCLDYETEDSYRFTVYATDTL-----MTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
            +   LD E +  +   + A D       + ++  + +S+ +VND  P+F  P Y + +  
Sbjct: 879  ITHPLDRELQHEHYLKIEARDQAREEPQLFSTVVLKVSLEDVNDNPPKFIPPNYRVKV-- 936

Query: 154  IPLADLTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSIND-SGHISIV-DLSALNT 209
                DL  G+VI  +EA D D G   +V  SL    E  F ++  SG + IV  L     
Sbjct: 937  --REDLPEGTVIMWLEAHDPDLGQSGQVRYSLMDHGEGNFDVDKLSGAVRIVQQLDFEKK 994

Query: 210  STIQLVVVATDTGNP 224
                L V A D G P
Sbjct: 995  QVYNLTVRAKDKGKP 1009



 Score = 40.8 bits (94), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 54/215 (25%), Positives = 88/215 (40%), Gaps = 19/215 (8%)

Query: 24  DRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLR---VKYW 80
           DR A   ++V   G +    +F++  Y  +  EN+P+   +++++   P +     V Y 
Sbjct: 442 DRKASTKVLVKVLGANSNPPEFTQTAYKAAFDENVPIGTTVMSLSAVDPDEGENGYVTYS 501

Query: 81  LSNDYGERFSISR-QGDISLMQCLDYE-TEDSYRFTVYATDTLM----TTSATVNISVVN 134
           ++N     F I    G +S  + LDYE     Y   + A+D  +           I++ N
Sbjct: 502 ITNLNHVPFVIDHFTGAVSTSENLDYELMPRVYTLRIRASDWGLPYRREAEVLATITLNN 561

Query: 135 VNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYE-KMFSI 193
           +ND  P F     E  +P     DL  G  I  V A D D+   V   +    E  +FS+
Sbjct: 562 LNDNTPLFEKINCEGTIPR----DLGVGEQITTVSAIDADELQLVQYQIEAGNELDLFSL 617

Query: 194 NDSGHI-----SIVDLSALNTSTIQLVVVATDTGN 223
           N    +     S++D      S   L + ATD  N
Sbjct: 618 NPHSGVLSLKQSLMDGLGAKVSFHSLRITATDGEN 652



 Score = 39.7 bits (91), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 51/190 (26%), Positives = 84/190 (44%), Gaps = 28/190 (14%)

Query: 56   ENLPVNYVLLTVTTNKP---RDLRVKYWLSNDYG-ERFSISRQ-GDISLMQCLDYETEDS 110
            E+ PV  +++TV+ +     RD  ++Y + +  G   F I  + G I     LD E+   
Sbjct: 1045 EDAPVGSLVMTVSAHDEDAGRDGEIRYSIRDGSGVGVFKIGEETGIIETSDRLDRESTSH 1104

Query: 111  YRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGK 167
            Y  TV+ATD     +++   + I V +VND  P+   P   ++ P I L +      + +
Sbjct: 1105 YWLTVFATDQGVVPLSSFIEIYIEVEDVNDNAPQTSEP---VYYPEI-LENSPKDVSVVQ 1160

Query: 168  VEAADGDKGDRVTLSLRGPYEKMFSINDSGHISIVDLSALNTSTIQ-----------LVV 216
            +EA D D      L  R     + S N  G  ++   + L T+T +           L V
Sbjct: 1161 IEAFDPDLSSNDKLVYR-----ITSGNPQGFFAVHPKTGLITTTSRKLDREQQDEHILEV 1215

Query: 217  VATDTGNPPR 226
              TD G+PP+
Sbjct: 1216 TVTDNGSPPK 1225



 Score = 38.9 bits (89), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 40/161 (24%), Positives = 74/161 (45%), Gaps = 12/161 (7%)

Query: 45   FSKNEYSVSALENLPVNY-VLLTVTTNKPRDLR----VKYWLSNDYGERFSISRQGDISL 99
            FS+  YSV   EN PV + VL  V T++         V   ++ +  + F +++QG +  
Sbjct: 3443 FSRGNYSVIIQENKPVGFSVLRLVVTDEDSSHNGPPFVFTIVTGNDEKAFEVNQQGVLLT 3502

Query: 100  MQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
               +  + +D +   V   D     +++   ++I V+  + + P       E+F+     
Sbjct: 3503 ASAIKRKEKDHFLLQVKVADNGKPQLSSLTYIDIRVIEESIYPPAIL--PLEIFI--TAS 3558

Query: 157  ADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSG 197
             +   G VIGK+ A D D  D +T SL    + +FS++ +G
Sbjct: 3559 GEEYSGGVIGKIHATDQDVYDTLTYSLDPQMDNLFSVSSTG 3599



 Score = 38.9 bits (89), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 39/128 (30%), Positives = 56/128 (43%), Gaps = 21/128 (16%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDLR------------VKYWLSNDYGERFSI- 91
            F + EY+    E+  +N V+LT   N P  +R            V + +     + F+I 
Sbjct: 1768 FMQAEYTGLISESASINSVVLT-DRNVPLVIRAADADKDSNALLVYHIVEPSVHKYFAID 1826

Query: 92   SRQGDISLMQCLDYETEDSYRFTVYATDT-----LMTTSATVNISVVNVNDWDPRFRYPQ 146
            S  G I  +  LDYE   ++ FTV   D          +A V I V+++ND  P F  P 
Sbjct: 1827 SSTGAIHTVLSLDYEETSTFHFTVQVHDMGTPRLFAEYAANVTIHVIDINDCPPVFAKPL 1886

Query: 147  YE--LFLP 152
            YE  L LP
Sbjct: 1887 YEASLLLP 1894



 Score = 38.1 bits (87), Expect = 7.4,   Method: Compositional matrix adjust.
 Identities = 40/129 (31%), Positives = 56/129 (43%), Gaps = 14/129 (10%)

Query: 92   SRQGDISLMQCLDYETEDSYRFTVYATDTLM---TTSATVNISVVNVNDWDPRFRYPQYE 148
            S  G ISL++ LDYE    +   V A D  M   ++   V + V ++ND  P F    YE
Sbjct: 2340 SSTGLISLLRTLDYEQSQRHTIFVRAVDGGMPPLSSDVIVTVDVTDLNDNPPLFEQQIYE 2399

Query: 149  LFL-PHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSINDSGHISIVDL 204
              +  H P      G  +  V+A D D  D   L    L G   K F I+ +    I+ L
Sbjct: 2400 ARISEHAPH-----GHFVTCVKAYDADSSDIDKLQYSILSGNDHKHFIIDSA--TGIITL 2452

Query: 205  SALNTSTIQ 213
            S L   T++
Sbjct: 2453 SNLRRHTLK 2461


>gi|109079410|ref|XP_001110265.1| PREDICTED: protocadherin Fat 2-like [Macaca mulatta]
          Length = 4349

 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 57/194 (29%), Positives = 91/194 (46%), Gaps = 23/194 (11%)

Query: 43   LQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGER---FSISRQ-GDIS 98
            L F +  YS + +E  PVN+++  ++      L   +W +   G++   F I +  G I 
Sbjct: 1347 LAFDETHYSFTVMETDPVNHMVGVISVEGRPGL---FWFNISGGDKDMDFDIEKTTGSIV 1403

Query: 99   LMQCLDYETEDSYRFTVYATDTLMTTSATVNISVV-NVNDWDPRFRYPQYELFLPHIPLA 157
            + + LD     SY  TV  TD   T +  V+I ++ N+N   P+F   +YE+ +P     
Sbjct: 1404 IARPLDTRRRSSYNLTVEVTDGSRTIATQVHIFMIANINHHRPQFLETRYEVRVPQ---- 1459

Query: 158  DLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSGHISIVDLSALNTSTIQLVVV 217
            D  PG  + +V+A D DKG  +  ++ G         D G  S   L  L+ ST  LV V
Sbjct: 1460 DTVPGVELLRVQAIDQDKGKSLIYTIHGS-------QDPGSAS---LFQLDPSTGVLVTV 1509

Query: 218  AT-DTGNPPRQASV 230
               D G+ P Q ++
Sbjct: 1510 GKLDLGSGPSQHTL 1523



 Score = 55.8 bits (133), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 63/201 (31%), Positives = 87/201 (43%), Gaps = 20/201 (9%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTT------NKPRDLRVKYWLSNDYGERFSISRQGD- 96
            +F+  EY  S +EN     +++T+ T       + R +   Y    D   +F IS+ GD 
Sbjct: 2905 RFASEEYRGSVVENSEPGKLVVTLKTLDADISEQNRQVTC-YITEGDPLGQFGISQVGDE 2963

Query: 97   --ISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHI 154
              IS  + LD E    Y   V A+D     S TV I V++VND  P+      +L     
Sbjct: 2964 WRISSRKTLDREHTAKYLLRVTASDGKFQASVTVEIFVLDVNDNSPQCS----QLVYTGK 3019

Query: 155  PLADLTPGSVIGKVEAA--DGDKGDRVTLSLRGPYEKMFSINDSGHISIVDLSALN---T 209
               D+ PG  I KV A   D D   ++T SL GP    F + D     +  L+AL+    
Sbjct: 3020 VHEDVFPGHFILKVSATDLDTDTNAQITYSLHGPGAHEFKL-DPHTGELTTLTALDRERK 3078

Query: 210  STIQLVVVATDTGNPPRQASV 230
                LV  ATD G    QA V
Sbjct: 3079 DVFNLVAKATDGGGRSCQADV 3099



 Score = 55.1 bits (131), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 45/142 (31%), Positives = 69/142 (48%), Gaps = 16/142 (11%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYG----ERFSI-SRQGD 96
            F  + Y     EN+PV   ++ VT    +  RD +V Y LS D G    E F+I S  G 
Sbjct: 2797 FEADPYKAVLTENMPVGTSVIQVTAIDKDTGRDGQVSYRLSADPGSNVHELFAIDSESGW 2856

Query: 97   ISLMQCLDYETEDSYRFTVYATD----TLMTTSATVNISVVNVNDWDPRFRYPQYELFLP 152
            I+ +Q LD ET  +Y F V A D      +++ A V +S+ + ND  PRF   +Y   + 
Sbjct: 2857 ITTLQELDCETCQTYHFHVVAYDHGQTIQLSSQALVQVSITDENDNAPRFASEEYRGSV- 2915

Query: 153  HIPLADLTPGSVIGKVEAADGD 174
               + +  PG ++  ++  D D
Sbjct: 2916 ---VENSEPGKLVVTLKTLDAD 2934



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 57/225 (25%), Positives = 100/225 (44%), Gaps = 19/225 (8%)

Query: 28   LATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWL--S 82
            + T++V+    +    QF ++ YS   LEN  V  V+LTV+    + P +  + Y L   
Sbjct: 3304 VTTVVVNITDVNEHRPQFPQDPYSTRVLENALVGDVILTVSATDEDGPLNSDITYSLVGG 3363

Query: 83   NDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWD 139
            N  G      ++G++ + + LD+E   SY   + ATD+    +     + + V +VND  
Sbjct: 3364 NQLGHFTIHPKKGELQVAKALDWEQASSYSLKLRATDSGQPPLHEDTDIAVQVADVNDNP 3423

Query: 140  PRFRYPQYELFLPHIPLADLTP-GSVIGKVEAADGDK---GDRVTLSL-RGPYEKMFSIN 194
            PRF    Y        + + +P GS + ++  +D D    G   +  + +G     F + 
Sbjct: 3424 PRFFQLNYS-----TTVQENSPIGSKVLQLILSDPDSPENGPPYSFQITKGNDGSAFRVT 3478

Query: 195  DSGHISIVD-LSALNTSTIQLVVVATDTGNPPRQASVPAIMHFPE 238
              G +   + LS       QL + A+D+G PP  +S    +H  E
Sbjct: 3479 PDGWLVTAEGLSRRAQEWYQLQIQASDSGIPPLSSSTSVRVHVTE 3523



 Score = 46.2 bits (108), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 65/245 (26%), Positives = 101/245 (41%), Gaps = 29/245 (11%)

Query: 5    DDFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQ-------------FSKNEYS 51
            D +L  ITL  +   Y   ++Y L  +       SL+  +             F    Y 
Sbjct: 2119 DPYLGDITLK-KPFDYQALNKYRLKVIARDGGTPSLQSEEEVLVTVRNKSNPLFQSPYYK 2177

Query: 52   VSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGERFSIS--RQGDISLMQCLDYETED 109
            V   EN+ +   +L      P  LR+ Y +  +       +  + G +++   LDYE++ 
Sbjct: 2178 VRVPENITLYTPILHTQARSPEGLRLIYNIVEEEPLMLFTTDFKTGVLTVTGPLDYESKT 2237

Query: 110  SYRFTVYATDTLMT--TSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGK 167
             + FTV ATDT +   + ATV + V +VND  P F    Y   +    L   TP   + +
Sbjct: 2238 KHVFTVRATDTALGSFSEATVEVLVEDVNDNPPTFSQLVYTTSISE-GLPAQTP---VIQ 2293

Query: 168  VEAADGDKGDRVTLSLR-----GPYEKMFSINDS-GHISIV-DLSALNTSTIQLVVVATD 220
            + A+D D G    +S +         K F IN S G +S V +L         + V A D
Sbjct: 2294 LLASDRDSGQNRDVSYQIVEDGSDVSKFFQINGSTGEMSTVQELDYEAQQHFHVKVRAMD 2353

Query: 221  TGNPP 225
             G+PP
Sbjct: 2354 KGDPP 2358



 Score = 46.2 bits (108), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 65/242 (26%), Positives = 103/242 (42%), Gaps = 21/242 (8%)

Query: 10   PITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTT 69
            P TL V+A    +   + LAT+I+    +      FSK+EY V   E++PV   +L V+ 
Sbjct: 1625 PHTLTVKAEDQGSPQWHDLATVIIHVYPSDRSAPIFSKSEYFVEIPESIPVGSPILLVSA 1684

Query: 70   NKPRDLRVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDTLMT-TSATV 128
                ++  +    N  G     S  G IS  + LD+E   SY+  +  ++     T   V
Sbjct: 1685 MSSSEVTYELREGNKDGVFSMNSYSGLISTQKNLDHEKISSYQLKIRGSNMAGAFTDVMV 1744

Query: 129  NISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGK------VEAADGDKGDRVTLS 182
             + +++ ND  P F       F+  I  A      ++ K      + A+D DK     L 
Sbjct: 1745 VVDIIDENDNAPMFL---KSTFVGQISEAAPLYSMIMDKNNNPFVIHASDSDKETNSLLV 1801

Query: 183  ---LRGPYEKMFSINDS-GHISIV-DLSALNTSTIQLVVVATDTGNP----PRQASVPAI 233
               L     K F I+ S G ++IV ++   +  + Q  V   D G+P    PR A V  I
Sbjct: 1802 YKILEPEALKFFKIDPSMGTLTIVSEMDYESMPSFQFCVYVHDQGSPILFAPRPAQV--I 1859

Query: 234  MH 235
            +H
Sbjct: 1860 IH 1861



 Score = 45.8 bits (107), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 48/143 (33%), Positives = 75/143 (52%), Gaps = 11/143 (7%)

Query: 95   GDISLMQCLDYETEDSYRFTVYATD----TLMTTSATVNISVVNVNDWDPRFRYPQYELF 150
            G +S  + LD E +D +   V   D    +L +TS  V I +++VND  P F +  + + 
Sbjct: 1192 GLLSTARQLDRENKDEHILEVTVLDNGEPSLKSTSRVV-IGILDVNDNPPVFSHKLFNVR 1250

Query: 151  LPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIND-SGHISIVDLSAL 207
            LP   L+ ++ G V  ++ A+D D+G   RVT S++   E+ FSI+  +G +S       
Sbjct: 1251 LPER-LSPVSSGPVY-RLVASDLDEGLNGRVTYSIKESDEEGFSIDPVTGVVSSSSTFTA 1308

Query: 208  NTSTIQLVVVATDTGNPPRQASV 230
                I L + ATD+G PP  ASV
Sbjct: 1309 GEYNI-LTIKATDSGQPPLSASV 1330



 Score = 42.7 bits (99), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 65/229 (28%), Positives = 98/229 (42%), Gaps = 18/229 (7%)

Query: 10   PITLVVRAIQYDNQDRYA-LATLIVSKAGTSLRELQFSKNEYSVSALENLPVN-YVLLTV 67
            P+ L VRA         + L T+ VS  G       F   E+SV   E+ P    VL   
Sbjct: 3182 PLELTVRASDLGTPISLSTLGTVTVSVVGLEDYLPVFLNTEHSVQVPEDAPPGTEVLQLA 3241

Query: 68   TTNKPRDLRVKYWL--SNDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDTLMTT 124
            T  +P   +  Y +   N+ G RF + +R G + +   LD+ET   Y  ++  +    ++
Sbjct: 3242 TLTRPGAEKTGYRMVSGNEQG-RFRLDARTGILYVNASLDFETSPKYFLSIECSRKSSSS 3300

Query: 125  SATVNISVVN---VNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDK--GDRV 179
             + V   VVN   VN+  P+F    Y   +    L +   G VI  V A D D      +
Sbjct: 3301 LSDVTTVVVNITDVNEHRPQFPQDPYSTRV----LENALVGDVILTVSATDEDGPLNSDI 3356

Query: 180  TLSLRGPYE-KMFSIN-DSGHISIVD-LSALNTSTIQLVVVATDTGNPP 225
            T SL G  +   F+I+   G + +   L     S+  L + ATD+G PP
Sbjct: 3357 TYSLVGGNQLGHFTIHPKKGELQVAKALDWEQASSYSLKLRATDSGQPP 3405



 Score = 42.0 bits (97), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 43/154 (27%), Positives = 71/154 (46%), Gaps = 15/154 (9%)

Query: 51  SVSALENLPVNYVLLTVTTNKPR---DLRVKYWLSNDYGER-FSISRQ-GDISLMQCLDY 105
           S+  LE++P+N  L  +    P    + ++ Y +++   E  F I  + G +++   LDY
Sbjct: 721 SIDVLESVPINTPLARLAATDPDAGFNGKLVYVIADGNEEGCFDIELETGLLTVAAPLDY 780

Query: 106 ETEDSYRFTVYATDTLMTTSATVNISVVNVNDWD---PRFRYPQYELFLPHIPLADLTPG 162
           E  + Y   V   D      ++  +  VNV DW+   PRF    Y+L +      D   G
Sbjct: 781 EATNFYILNVTVYDLGTPQKSSWKLLTVNVKDWNDNAPRFPPGGYQLTISE----DTEVG 836

Query: 163 SVIGKVEAADGDKGD--RVTLSLRGPYEKMFSIN 194
           + I ++   D D  D  RV  +L  P EK FS++
Sbjct: 837 TTIAELTTKDADSEDNGRVRYTLLSPTEK-FSLH 869



 Score = 41.2 bits (95), Expect = 0.78,   Method: Compositional matrix adjust.
 Identities = 39/133 (29%), Positives = 68/133 (51%), Gaps = 14/133 (10%)

Query: 95   GDISLMQCLDYETEDSYRFTVYATDT-----LMTTSATVNISVVNVNDWDPRFRYPQYEL 149
            G ++++  +DYE+  S++F VY  D           A V I V +VND  PRF    YE+
Sbjct: 1820 GTLTIVSEMDYESMPSFQFCVYVHDQGSPILFAPRPAQVIIHVRDVNDSPPRFSEQIYEV 1879

Query: 150  FLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSIND-SGHISIVDLSAL 207
             +    +  + PG  +  V A+D D    V  S++ G  ++  +I+  +G IS+++ + L
Sbjct: 1880 AI----VGPIHPGMELLMVRASDDDS--EVNYSIKTGNADEAVTIHPITGSISVLNPALL 1933

Query: 208  NTSTIQLVVVATD 220
              S  +L + A+D
Sbjct: 1934 GLSR-KLTIRASD 1945



 Score = 40.0 bits (92), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 57/202 (28%), Positives = 87/202 (43%), Gaps = 24/202 (11%)

Query: 41   RELQFSKNEYSVSALENLPVN--YVLLTVTTNKPRDLRVKYWLSNDYGERFSISRQGDIS 98
            + LQF ++ Y+ +  E+L      V+L    N   D  + Y+L N       +   G + 
Sbjct: 1964 KSLQFDQDVYTAAVKEDLQDRKALVILGAQGNHLNDT-LSYFLLNGTDMFHMVQSAGVLQ 2022

Query: 99   LMQ-CLDYETEDSYRFTVYATDTLM---TTSATVNISVVNVNDWDPRFRY-PQYELFLPH 153
                  D E +D++   V   D         A V +S+ +VND  P+F++ P Y +    
Sbjct: 2023 TRGVAFDREQQDTHELAVEVRDNRTPQRVAQALVRVSIEDVNDNPPKFKHLPYYTI---- 2078

Query: 154  IPLADLT-PGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDS-GHISI---VDLSA 206
              + D T PG V+ +V A D D G    VT      Y   F I+   G I++    D  A
Sbjct: 2079 --IQDGTEPGDVLFQVSATDEDLGTNGAVTYEFAEDY-TYFRIDPYLGDITLKKPFDYQA 2135

Query: 207  LNTSTIQLVVVATDTGNPPRQA 228
            LN    +L V+A D G P  Q+
Sbjct: 2136 LN--KYRLKVIARDGGTPSLQS 2155



 Score = 39.7 bits (91), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 55/198 (27%), Positives = 90/198 (45%), Gaps = 23/198 (11%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTTNKPRD------LRVKYWLSNDYGERFSISRQ-GD 96
            +FS+  Y+ SALE+LP    +  V     +D      +R     SN  G  FS+    G 
Sbjct: 2690 KFSEPLYTFSALEDLPEGSEIGVVKAVAAQDPVIYSLVRGTTPESNKDG-VFSLDPDTGV 2748

Query: 97   ISLMQCLDYETEDSYRFTVYA---TDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
            I + + +D+E+   Y+  V A    ++ + +  +VNI V +VND  P F    Y+  L  
Sbjct: 2749 IKVRKPMDHESTKLYQIDVMAHCLQNSDVVSLVSVNIQVGDVNDNRPVFEADPYKAVL-- 2806

Query: 154  IPLADLTPGSVIGKVEAADGDKGDRVTLSLR------GPYEKMFSIN-DSGHISIV-DLS 205
                ++  G+ + +V A D D G    +S R          ++F+I+ +SG I+ + +L 
Sbjct: 2807 --TENMPVGTSVIQVTAIDKDTGRDGQVSYRLSADPGSNVHELFAIDSESGWITTLQELD 2864

Query: 206  ALNTSTIQLVVVATDTGN 223
                 T    VVA D G 
Sbjct: 2865 CETCQTYHFHVVAYDHGQ 2882


>gi|66346693|ref|NP_005236.2| protocadherin Fat 1 precursor [Homo sapiens]
 gi|334302792|sp|Q14517.2|FAT1_HUMAN RecName: Full=Protocadherin Fat 1; AltName: Full=Cadherin family
            member 7; AltName: Full=Cadherin-related tumor suppressor
            homolog; AltName: Full=Protein fat homolog; Contains:
            RecName: Full=Protocadherin Fat 1, nuclear form; Flags:
            Precursor
          Length = 4588

 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 41/156 (26%), Positives = 78/156 (50%), Gaps = 11/156 (7%)

Query: 33   VSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWL---SNDYGERF 89
            +SK   SL  + F ++ ++ + +E+ PV +++  ++   P    +  W      +Y   F
Sbjct: 1346 ISKPKPSLEPISFEESFFTFTVMESDPVAHMIGVISVEPPG---IPLWFDITGGNYDSHF 1402

Query: 90   SISR-QGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYE 148
             + +  G I + + LD E + +Y  TV ATD   T    V I V++ ND  P+F   +YE
Sbjct: 1403 DVDKGTGTIIVAKPLDAEQKSNYNLTVEATDGTTTILTQVFIKVIDTNDHRPQFSTSKYE 1462

Query: 149  LFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR 184
            + +P     D  P + I ++ A D D+ +++  +L+
Sbjct: 1463 VVIPE----DTAPETEILQISAVDQDEKNKLIYTLQ 1494



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 65/227 (28%), Positives = 107/227 (47%), Gaps = 25/227 (11%)

Query: 33   VSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTV-TTNKPRDL--RVKYWLSNDYG-ER 88
            V+  G +L    F +NEY V   EN P++ +++ V TT+    +   V Y + ND+  +R
Sbjct: 2480 VTVIGGNLHSPAFLQNEYEVELAENAPLHTLVMEVKTTDGDSGIYGHVTYHIVNDFAKDR 2539

Query: 89   FSISRQGDISLMQCLDYET--EDSYRFTVYATDTLMTTS-ATVNISVVNVNDWDPRFRYP 145
            F I+ +G I  ++ LD ET  E      + A D     +  TVN+ + + ND  P+FR  
Sbjct: 2540 FYINERGQIFTLEKLDRETPAEKVISVRLMAKDAGGKVAFCTVNVILTDDNDNAPQFRAT 2599

Query: 146  QYELFLPHIPLADLTPGSVIGKVEAADGDKGDR--VTLSLRGPYEKM---FSIND-SGHI 199
            +YE+ +     +    G+ + KV A+D D+G    +T ++    E +     IN  SG I
Sbjct: 2600 KYEVNIG----SSAAKGTSVVKVLASDADEGSNADITYAIEADSESVKENLEINKLSGVI 2655

Query: 200  SIVD-LSALNTSTIQLVVVATDTGNPPRQASV-------PAIMHFPE 238
            +  + L  L        V A D G+P +++ V       P  M  P+
Sbjct: 2656 TTKESLIGLENEFFTFFVRAVDNGSPSKESVVLVYVKILPPEMQLPK 2702



 Score = 57.8 bits (138), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 59/244 (24%), Positives = 106/244 (43%), Gaps = 40/244 (16%)

Query: 4    EDDFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYV 63
            E++F    T  VRA+   +  + ++  + V      ++  +FS+  Y+ +  E++P+   
Sbjct: 2665 ENEFF---TFFVRAVDNGSPSKESVVLVYVKILPPEMQLPKFSEPFYTFTVSEDVPIGTE 2721

Query: 64   LLTVTTNKPRDLRVKYWLSN----DYGERFSISRQ-GDISLMQCLDYETEDSYRFTVYAT 118
            +  +       +       N    +  E F I RQ G + L + LD+ET   Y+F++ A 
Sbjct: 2722 IDLIRAEHSGTVLYSLVKGNTPESNRDESFVIDRQSGRLKLEKSLDHETTKWYQFSILAR 2781

Query: 119  ----DTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGD 174
                D  M  S  V+I V + ND  P F    YE F+    + +L  GS + ++ A+D D
Sbjct: 2782 CTQDDHEMVASVDVSIQVKDANDNSPVFESSPYEAFI----VENLPGGSRVIQIRASDAD 2837

Query: 175  KGDRVTLSLRGPYEKMFSINDSGHISIVDLSALNTST----------------IQLVVVA 218
             G    +        M+S++ S  + +++  A+N  T                 Q+ VVA
Sbjct: 2838 SGTNGQV--------MYSLDQSQSVEVIESFAINMETGWITTLKELDHEKRDNYQIKVVA 2889

Query: 219  TDTG 222
            +D G
Sbjct: 2890 SDHG 2893



 Score = 55.8 bits (133), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 62/215 (28%), Positives = 102/215 (47%), Gaps = 21/215 (9%)

Query: 27   ALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLS---- 82
            A  T+IVS    +     F   EY  +  E++ V   +L V     RD+     ++    
Sbjct: 3212 ATGTVIVSVLDINDNPPVFEYREYGATVSEDILVGTEVLQVYAAS-RDIEANAEITYSII 3270

Query: 83   --NDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVN 136
              N++G +FSI S+ G + +++ LDYE+   Y  TV ATD     ++  ATVN++V ++N
Sbjct: 3271 SGNEHG-KFSIDSKTGAVFIIENLDYESSHEYYLTVEATDGGTPSLSDVATVNVNVTDIN 3329

Query: 137  DWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS-LRGPYEKMFSIND 195
            D  P F    Y   +    + + +  +V+   + ADG     +  S + G     F+I+ 
Sbjct: 3330 DNTPVFSQDTYTTVISEDAVLEQSVITVMA--DDADGPSNSHIHYSIIDGNQGSSFTIDP 3387

Query: 196  -SGHISIVDLSALNTSTIQ---LVVVATDTGNPPR 226
              G + +  L  L+  TI    L V A+D G+PPR
Sbjct: 3388 VRGEVKVTKL--LDRETISGYTLTVQASDNGSPPR 3420



 Score = 54.3 bits (129), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 42/145 (28%), Positives = 68/145 (46%), Gaps = 8/145 (5%)

Query: 90   SISRQGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYEL 149
            +I  +  + + + LD E  D+Y  T+ ATD   ++ A V + V++ ND  P      Y  
Sbjct: 2971 TIQNEWKVYVKKPLDREKRDNYLLTITATDGTFSSKAIVEVKVLDANDNSPVCEKTLYSD 3030

Query: 150  FLPHIPLADLTPGSVIGKVEAADGD--KGDRVTLSLRGPYEKMFSIN-DSGHISI-VDLS 205
             +P     D+ PG +I ++ A D D      +T +L G   + F +N D+G +     L 
Sbjct: 3031 TIPE----DVLPGKLIMQISATDADIRSNAEITYTLLGSGAEKFKLNPDTGELKTSTPLD 3086

Query: 206  ALNTSTIQLVVVATDTGNPPRQASV 230
                +   L+V ATD G    QAS+
Sbjct: 3087 REEQAVYHLLVRATDGGGRFCQASI 3111



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 61/225 (27%), Positives = 107/225 (47%), Gaps = 19/225 (8%)

Query: 13   LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKP 72
            L+VRA   D   R+  A+++++    +    +FS + Y+++  EN     +L  V     
Sbjct: 3095 LLVRAT--DGGGRFCQASIVLTLEDVNDNAPEFSADPYAITVFENTEPGTLLTRVQATDA 3152

Query: 73   R---DLRVKYWLSNDYGERFSISR-QGDISLMQCLDYETEDSYRFTVYATDT----LMTT 124
                + ++ Y L +    +FSI+   G I L + LD E +  Y  ++ A D      +T 
Sbjct: 3153 DAGLNRKILYSLIDSADGQFSINELSGIIQLEKPLDRELQAVYTLSLKAVDQGLPRRLTA 3212

Query: 125  SATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAA--DGDKGDRVTLS 182
            + TV +SV+++ND  P F Y +Y   +      D+  G+ + +V AA  D +    +T S
Sbjct: 3213 TGTVIVSVLDINDNPPVFEYREYGATVSE----DILVGTEVLQVYAASRDIEANAEITYS 3268

Query: 183  -LRGPYEKMFSIND-SGHISIVD-LSALNTSTIQLVVVATDTGNP 224
             + G     FSI+  +G + I++ L   ++    L V ATD G P
Sbjct: 3269 IISGNEHGKFSIDSKTGAVFIIENLDYESSHEYYLTVEATDGGTP 3313



 Score = 51.2 bits (121), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 77/162 (47%), Gaps = 21/162 (12%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSN-DYGERFSIS-RQGDISLMQC 102
            F K  YS    E++ V+  ++ V  N P  L+V Y +++ D   +F+I+   G I+++  
Sbjct: 2182 FEKPFYSAEIAESIQVHSPVVHVQANSPEGLKVFYSITDGDPFSQFTINFNTGVINVIAP 2241

Query: 103  LDYETEDSYRFTVYATDTLMTTSATVNISVV--NVNDWDPRFRYPQYELFLPHIPLADLT 160
            LD+E   +Y+ ++ ATD+L    A V + ++  ++ND  P F    Y +         L+
Sbjct: 2242 LDFEAHPAYKLSIRATDSLTGAHAEVFVDIIVDDINDNPPVFAQQSYAV--------TLS 2293

Query: 161  PGSVIG----KVEAADGDKGDRVTLSLRGPYEKMFSINDSGH 198
              SVIG    +V A D D         RG   +MF  +   H
Sbjct: 2294 EASVIGTSVVQVRATDSDSEPN-----RGISYQMFGNHSKSH 2330



 Score = 42.7 bits (99), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 54/191 (28%), Positives = 86/191 (45%), Gaps = 30/191 (15%)

Query: 56   ENLPVNYVLLTVTTNKP---RDLRVKYWLSNDYG-ERFSISRQ-GDISLMQCLDYETEDS 110
            E+ PV  +++TV+ +     RD  ++Y + +  G   F I  + G I     LD E+   
Sbjct: 1045 EDAPVGSLVMTVSAHDEDARRDGEIRYSIRDGSGVGVFKIGEETGVIETSDRLDRESTSH 1104

Query: 111  YRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSV-IG 166
            Y  TV+ATD     +++   + I V +VND  P+   P   ++ P I   + +P  V + 
Sbjct: 1105 YWLTVFATDQGVVPLSSFIEIYIEVEDVNDNAPQTSEP---VYYPEI--MENSPKDVSVV 1159

Query: 167  KVEAADGDKGDRVTLSLRGPYEKMFSINDSGHISIVDLSALNTSTIQ-----------LV 215
            ++EA D D      L       K+ S N  G  SI   + L T+T +           L 
Sbjct: 1160 QIEAFDPDSSSNDKLMY-----KITSGNPQGFFSIHPKTGLITTTSRKLDREQQDEHILE 1214

Query: 216  VVATDTGNPPR 226
            V  TD G+PP+
Sbjct: 1215 VTVTDNGSPPK 1225



 Score = 42.7 bits (99), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 55/215 (25%), Positives = 90/215 (41%), Gaps = 19/215 (8%)

Query: 24  DRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLR---VKYW 80
           DR A   ++V   G +    +F++  Y  +  EN+P+   +++++   P +     V Y 
Sbjct: 442 DRKASTKVLVKVLGANSNPPEFTQTAYKAAFDENVPIGTTVMSLSAVDPDEGENGYVTYS 501

Query: 81  LSNDYGERFSISR-QGDISLMQCLDYE-TEDSYRFTVYATDTLMTTSATVN----ISVVN 134
           ++N     F+I    G +S  + LDYE     Y   + A+D  +     V     I++ N
Sbjct: 502 IANLNHVPFAIDHFTGAVSTSENLDYELMPRVYTLRIRASDWGLPYRREVEVLATITLNN 561

Query: 135 VNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYE-KMFSI 193
           +ND  P F     E  +P     DL  G  I  V A D D+   V   +    E   FS+
Sbjct: 562 LNDNTPLFEKINCEGTIPR----DLGVGEQITTVSAIDADELQLVQYQIEAGNELDFFSL 617

Query: 194 NDSGHI-----SIVDLSALNTSTIQLVVVATDTGN 223
           N +  +     S++D      S   L + ATD  N
Sbjct: 618 NPNSGVLSLKRSLMDGLGAKVSFHSLRITATDGEN 652



 Score = 42.0 bits (97), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 56/195 (28%), Positives = 86/195 (44%), Gaps = 20/195 (10%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTTNKPRDL----RVKYWLSNDYGERFSI-SRQGDIS 98
            +F +  Y V   E+  V+  ++ V     +DL     V Y +  D  + FSI S  G ++
Sbjct: 821  EFLQESYFVEVSEDKEVHSEIIQVEATD-KDLGPNGHVTYSIVTD-TDTFSIDSVTGVVN 878

Query: 99   LMQCLDYETEDSYRFTVYATDTL-----MTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
            + + LD E +  +   + A D       + ++  V +S+ +VND  P F  P Y + +  
Sbjct: 879  IARPLDRELQHEHSLKIEARDQAREEPQLFSTVVVKVSLEDVNDNPPTFIPPNYRVKV-- 936

Query: 154  IPLADLTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSIND-SGHISIV-DLSALNT 209
                DL  G+VI  +EA D D G   +V  SL    E  F ++  SG + IV  L     
Sbjct: 937  --REDLPEGTVIMWLEAHDPDLGQSGQVRYSLLDHGEGNFDVDKLSGAVRIVQQLDFEKK 994

Query: 210  STIQLVVVATDTGNP 224
                L V A D G P
Sbjct: 995  QVYNLTVRAKDKGKP 1009



 Score = 38.1 bits (87), Expect = 7.9,   Method: Compositional matrix adjust.
 Identities = 42/162 (25%), Positives = 72/162 (44%), Gaps = 14/162 (8%)

Query: 45   FSKNEYSVSALENLPVNY-VLLTVTTNKPRDLRVKYWL-----SNDYGERFSISRQGDIS 98
            FS+  YSV   EN PV + VL  V T++        +       ND  + F ++ QG + 
Sbjct: 3440 FSRGNYSVIIQENKPVGFSVLQLVVTDEDSSHNGPPFFFTIVTGNDE-KAFEVNPQGVLL 3498

Query: 99   LMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIP 155
                +  + +D Y   V   D     +++   ++I V+  + + P       E+F+    
Sbjct: 3499 TSSAIKRKEKDHYLLQVKVADNGKPQLSSLTYIDIRVIEESIYPPAIL--PLEIFI--TS 3554

Query: 156  LADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSG 197
              +   G VIGK+ A D D  D +T SL    + +FS++ +G
Sbjct: 3555 SGEEYSGGVIGKIHATDQDVYDTLTYSLDPQMDNLFSVSSTG 3596



 Score = 37.7 bits (86), Expect = 9.6,   Method: Compositional matrix adjust.
 Identities = 40/129 (31%), Positives = 57/129 (44%), Gaps = 14/129 (10%)

Query: 92   SRQGDISLMQCLDYETEDSYRFTVYATDTLMTTSAT---VNISVVNVNDWDPRFRYPQYE 148
            S  G ISL++ LDYE    +   V A D  M T ++   V + V ++ND  P F    YE
Sbjct: 2337 SSTGLISLLRTLDYEQSRQHTIFVRAVDGGMPTLSSDVIVTVDVTDLNDNPPLFEQQIYE 2396

Query: 149  LFL-PHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSINDSGHISIVDL 204
              +  H P      G  +  V+A D D  D   L    L G   K F I+ +    I+ L
Sbjct: 2397 ARISEHAPH-----GHFVTCVKAYDADSSDIDKLQYSILSGNDHKHFVIDSA--TGIITL 2449

Query: 205  SALNTSTIQ 213
            S L+   ++
Sbjct: 2450 SNLHRHALK 2458


>gi|149021384|gb|EDL78847.1| rCG59113 [Rattus norvegicus]
          Length = 4589

 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 43/156 (27%), Positives = 79/156 (50%), Gaps = 11/156 (7%)

Query: 33   VSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYW---LSNDYGERF 89
            +SK   SL  + F ++ +S + +E+ PV +++  ++   P    +  W   +  +Y   F
Sbjct: 1347 ISKPKPSLEPISFEESVFSFTVMESDPVAHMIGVISVEPPG---MPLWFDIIGGNYDSHF 1403

Query: 90   SISR-QGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYE 148
             + +  G I + + LD E + SY  TV ATD   T    V I V++ ND  P+F   +YE
Sbjct: 1404 DVDKGTGTIIVAKPLDAEQKSSYNLTVEATDGTSTILTQVLIKVIDTNDHRPQFSTSKYE 1463

Query: 149  LFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR 184
            + +P     D  P + I ++ A D D+ +++  +L+
Sbjct: 1464 VSVPE----DTEPETEILQISAVDRDEKNKLIYTLQ 1495



 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 62/218 (28%), Positives = 103/218 (47%), Gaps = 20/218 (9%)

Query: 29   ATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDL----RVKYWLSND 84
            A + V+  G +L    F +NEY V   EN P++ +++ V     RD      + Y L ND
Sbjct: 2477 ARVNVTVMGGNLHSPVFHQNEYEVELAENAPLHTLVVQVKATD-RDSGIYGHLTYHLVND 2535

Query: 85   YG-ERFSISRQGDISLMQCLDYE--TEDSYRFTVYATDTLMTTS-ATVNISVVNVNDWDP 140
            +  +RF ++  G +  ++ LD E   E      + A D     +  TVN+ + + ND  P
Sbjct: 2536 FAKDRFYVNDGGQVFTLERLDREAPAEKVISVRLMAKDAGGKVAFCTVNVILTDDNDNAP 2595

Query: 141  RFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDR--VTLSLRGPYEKM---FSIND 195
            +FR  +YE+ +     +    G+ + KV A+D D+G    VT ++    E +     IN 
Sbjct: 2596 QFRSTKYEVNVG----SSAAKGTSVVKVFASDADEGSNADVTYAIEADSESVEENLEINQ 2651

Query: 196  -SGHISIVD-LSALNTSTIQLVVVATDTGNPPRQASVP 231
             +G I+  + L  L        V A D G+PP+++ VP
Sbjct: 2652 LTGLITTKESLIGLENEFFTFFVRAVDNGSPPKESVVP 2689



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 62/244 (25%), Positives = 116/244 (47%), Gaps = 19/244 (7%)

Query: 2    INEDDFLQPITLVVRAIQYDNQDRYALA-TLIVSKAGTSLREL--QFSKNEYSVSALENL 58
            + E D  +  +  ++ +  D+ ++  L+ T IV    T + +   +F+   Y  +  E+ 
Sbjct: 2873 LKELDHEERASYQIKVVASDHGEKVQLSSTAIVDVTVTDVNDSPPRFTAEIYKGTVSEDD 2932

Query: 59   PVNYVLLTVTT----NKPRDLRVKYWLSN-DYGERFSISR-QGD--ISLMQCLDYETEDS 110
            P   V+  ++T    ++  + +V Y+++  D   +F++   Q D  + + + LD E +DS
Sbjct: 2933 PPGGVIAILSTTDADSEEINRQVSYFITGGDALGQFAVENMQNDWRVYVKKPLDREQKDS 2992

Query: 111  YRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEA 170
            Y  TV ATD   ++ A V + V++ ND  P      Y   +P     D  PG ++ +V A
Sbjct: 2993 YLLTVTATDGTFSSKARVEVKVLDANDNSPVCERTAYSDAIPE----DALPGKLVMQVSA 3048

Query: 171  ADGD--KGDRVTLSLRGPYEKMFSIN-DSGHI-SIVDLSALNTSTIQLVVVATDTGNPPR 226
             D D      +T +L G   + F +N D+G + ++  L     +   L+V ATD G    
Sbjct: 3049 TDADIRSNAEITYTLFGSGAEKFKLNPDTGELRTLALLDREEQAVYHLLVKATDGGGRSC 3108

Query: 227  QASV 230
            QA++
Sbjct: 3109 QATI 3112



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 61/198 (30%), Positives = 96/198 (48%), Gaps = 27/198 (13%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSN-DYGERFSIS-RQGDISLMQC 102
            F K  YS    EN+  +  ++ V  N P  L+V Y +++ D   +F+I+   G I+++  
Sbjct: 2183 FEKAFYSAEIPENVQTHSPVVHVQANSPEGLKVFYSITDGDPFSQFTINFNTGVINVIAP 2242

Query: 103  LDYETEDSYRFTVYATDTLMTTSATVNISVV--NVNDWDPRFRYPQYELFLPHIPLADLT 160
            LD+E+  +Y+ ++ ATD+L    A V + +V  ++ND  P F    Y           L+
Sbjct: 2243 LDFESHPAYKLSIRATDSLTGAHAEVFVDIVVEDINDNPPVFVQQSYS--------TTLS 2294

Query: 161  PGSVIG----KVEAADGDK--GDRVTLSLRGPYEK---MFSIND-SGHISIVDLSALNTS 210
              SVIG    +V A D D      ++  L G + K    F I+  +G IS+V   AL+  
Sbjct: 2295 EASVIGAPILQVRATDSDSEPNRGISYQLIGNHSKSHDHFHIDSHTGLISLV--RALDYE 2352

Query: 211  TIQ---LVVVATDTGNPP 225
              Q   L+V A D G PP
Sbjct: 2353 QFQQHKLLVRAVDGGMPP 2370



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 62/213 (29%), Positives = 95/213 (44%), Gaps = 17/213 (7%)

Query: 27   ALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLS---- 82
            A  T++VS    +     F   EY  +  E++ +   +L V     RD+     ++    
Sbjct: 3213 ATGTVVVSVLDINDNPPVFEYREYGATVSEDIVIGTEVLQVYAAS-RDIEANAEITYAII 3271

Query: 83   --NDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVN 136
              N++G +FSI S+ G I +++ LDYE+   Y  TV ATD     ++  ATVNI++ ++N
Sbjct: 3272 SGNEHG-KFSIDSKTGAIFIIENLDYESSHGYYLTVEATDGGTPSLSDVATVNINITDIN 3330

Query: 137  DWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS-LRGPYEKMFSIND 195
            D  P F    Y   +     A L    +    + ADG     +  S + G     F+I+ 
Sbjct: 3331 DNSPVFSQDSYTTVVSED--AALEQPVITIMADDADGPSNSHILYSIIEGNQGSPFTIDP 3388

Query: 196  -SGHISIVD-LSALNTSTIQLVVVATDTGNPPR 226
              G I +   L     S   L V A D GNPPR
Sbjct: 3389 VRGEIKVTKPLDRETISGYTLTVQAADNGNPPR 3421



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 68/245 (27%), Positives = 114/245 (46%), Gaps = 42/245 (17%)

Query: 4    EDDFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNY- 62
            E++F    T  VRA+   +  + ++  + V      ++  +FS+  Y+ S  E++P+   
Sbjct: 2666 ENEFF---TFFVRAVDNGSPPKESVVPVYVKILPPEVQLPRFSEPFYTYSISEDMPIGTE 2722

Query: 63   -----------VLLT-VTTNKPRDLRVKYWLSNDYGERFSISRQ-GDISLMQCLDYETED 109
                       VL T V  N P   R ++         F I RQ G + L + LD+ET  
Sbjct: 2723 IDLIRVEHSGTVLYTLVKGNTPESNRDEF---------FVIDRQSGRLKLEKSLDHETTK 2773

Query: 110  SYRFTVYATDTL----MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVI 165
             Y+F++ A  TL    +  S  V+I V + ND  P      YE F+    + +L  GS +
Sbjct: 2774 WYQFSILARCTLDDYEVVASIDVSIQVKDANDNSPVLESNPYEAFI----VENLPAGSRV 2829

Query: 166  GKVEAADGDKG--DRVTLSLRGPYE----KMFSIN-DSGHISIV-DLSALNTSTIQLVVV 217
             +V A+D D G   +V  SL    +    + F+IN ++G I+ + +L     ++ Q+ VV
Sbjct: 2830 IQVRASDLDSGVNGQVMYSLDQSQDADIIESFAINMETGWITTLKELDHEERASYQIKVV 2889

Query: 218  ATDTG 222
            A+D G
Sbjct: 2890 ASDHG 2894



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 61/226 (26%), Positives = 107/226 (47%), Gaps = 21/226 (9%)

Query: 13   LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENL----PVNYVLLTVT 68
            L+V+A   D   R   AT++++    +    +F+ + Y+++  EN     P+  V  T  
Sbjct: 3096 LLVKAT--DGGGRSCQATIVLTLEDVNDNTPEFTADPYAITVFENTEPGTPLTRVQAT-D 3152

Query: 69   TNKPRDLRVKYWLSNDYGERFSISRQ-GDISLMQCLDYETEDSYRFTVYATDT----LMT 123
             +   + ++ Y L +    +FSI+ Q G + L + LD E +  Y  T+ A D      +T
Sbjct: 3153 ADAGLNRKISYSLLDSADGQFSINEQSGILQLEKHLDRELQAVYTLTLKAADQGLPRKLT 3212

Query: 124  TSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS- 182
             + TV +SV+++ND  P F Y +Y   +      D+  G+ + +V AA  D      ++ 
Sbjct: 3213 ATGTVVVSVLDINDNPPVFEYREYGATVSE----DIVIGTEVLQVYAASRDIEANAEITY 3268

Query: 183  --LRGPYEKMFSIND-SGHISIVD-LSALNTSTIQLVVVATDTGNP 224
              + G     FSI+  +G I I++ L   ++    L V ATD G P
Sbjct: 3269 AIISGNEHGKFSIDSKTGAIFIIENLDYESSHGYYLTVEATDGGTP 3314



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 56/195 (28%), Positives = 89/195 (45%), Gaps = 20/195 (10%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTTNKPRDL----RVKYWLSNDYGERFSISR-QGDIS 98
            +F +  Y V   E+  +N  ++ V     +DL     V Y +  D  E+F+I R  G + 
Sbjct: 822  EFLQESYFVEVSEDKEINSEIIQVEATD-KDLGPSGHVTYAILTDT-EKFAIDRVTGVVK 879

Query: 99   LMQCLDYETEDSYRFTVYATDT-----LMTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
            ++Q LD E +  +   + A D       ++++  + +S+ +VND  PRF  P Y + +  
Sbjct: 880  IIQPLDREVQRVHYLKIEARDQATEEPWLSSTVLLKVSLDDVNDNPPRFIPPSYSVKV-- 937

Query: 154  IPLADLTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSIND-SGHISIV-DLSALNT 209
                DL  G++I  +EA D D G   +V  SL    E  F ++  SG + IV  L     
Sbjct: 938  --REDLPEGTIIMWLEAHDPDVGQSSQVRYSLLDHGEGHFDVDKLSGAVRIVQQLDFEKK 995

Query: 210  STIQLVVVATDTGNP 224
                L V A D G P
Sbjct: 996  QLYNLTVRAKDKGKP 1010



 Score = 43.9 bits (102), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 56/191 (29%), Positives = 86/191 (45%), Gaps = 30/191 (15%)

Query: 56   ENLPVNYVLLTVTTNKP---RDLRVKYWLSNDYG-ERFSISRQ-GDISLMQCLDYETEDS 110
            E++P+   ++TV+ +     RD  ++Y + +  G   F I  + G I     LD E+   
Sbjct: 1046 EDVPMGSSVMTVSAHDEDTGRDGEIRYSIRDGSGVGVFRIDEETGVIETSDRLDRESTSH 1105

Query: 111  YRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSV-IG 166
            Y  TVYATD     +++   V I V +VND  P+   P   ++ P I   + +P  V + 
Sbjct: 1106 YWLTVYATDQGVVPLSSFIEVYIEVEDVNDNAPQTSEP---VYYPEI--MENSPKDVSVV 1160

Query: 167  KVEAADGDKGDRVTLSLRGPYEKMFSINDSGHISIVDLSALNTSTIQ-----------LV 215
            ++EA D D      L+ R     + S N  G  SI   + L T+T +           L 
Sbjct: 1161 QIEAFDPDSSSSDKLTYR-----ITSGNPQGFFSIHPKTGLITTTSRKLDREQQDEHILE 1215

Query: 216  VVATDTGNPPR 226
            V  TD G PPR
Sbjct: 1216 VTVTDNGVPPR 1226



 Score = 42.0 bits (97), Expect = 0.57,   Method: Compositional matrix adjust.
 Identities = 59/215 (27%), Positives = 88/215 (40%), Gaps = 19/215 (8%)

Query: 24  DRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLR---VKYW 80
           DR A   ++V   GT+    +F++  Y  S  EN PV   ++ V+   P +     V Y 
Sbjct: 443 DRRASTKVVVKVVGTNSNPPEFTQTSYKASFDENAPVGTPVMRVSAVDPDEGENGYVTYS 502

Query: 81  LSNDYGERFSISR-QGDISLMQCLDYE-TEDSYRFTVYATDTLMTTSATVN----ISVVN 134
           ++N     F I    G +S  + LDYE     Y   + A+D  +     V     I++ N
Sbjct: 503 IANLNHVPFVIDHFTGAVSTSENLDYELMPRVYMLRIRASDWGLPYRREVEVLATITLNN 562

Query: 135 VNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYE-KMFSI 193
           +ND  P F     E  +P     DL  G  I  V A D D+   V   +    E  +F +
Sbjct: 563 LNDNTPLFEKTNCEGTIPR----DLGVGEQITTVSAIDADELQLVRYQIEAGNELDLFGL 618

Query: 194 NDSGHI-----SIVDLSALNTSTIQLVVVATDTGN 223
           N S  +     S++D      S   L + ATD  N
Sbjct: 619 NPSSGVLSLKHSLMDGLGAKVSFHSLRITATDGEN 653



 Score = 39.7 bits (91), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 49/197 (24%), Positives = 85/197 (43%), Gaps = 18/197 (9%)

Query: 12   TLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNY-VLLTVTTN 70
            TL V+A    N  R    T+ +  +  +     FS++ YSV   EN PV + VL  V T+
Sbjct: 3408 TLTVQAADNGNPPRVNTTTVNIDVSDVNDNAPLFSRDNYSVIIQENKPVGFSVLKLVVTD 3467

Query: 71   K-------PRDLRVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDT--- 120
            K       P    +   +S +    F +++ G +     +  + +D Y   V   D    
Sbjct: 3468 KDSSHNGPPFSFAI---VSGNDDNMFEVNQHGVLLTAATVKRKVKDHYLLHVKVADNGKP 3524

Query: 121  LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVT 180
             +++   ++I V+  +   P       E+F+      +   G VIGK+ A D D  D +T
Sbjct: 3525 QLSSLTHIDIRVIEESIHPPAIL--PLEIFI--TASGEEYSGGVIGKIHATDQDVYDTLT 3580

Query: 181  LSLRGPYEKMFSINDSG 197
             SL    + +FS++ +G
Sbjct: 3581 YSLDPHMDGLFSVSSTG 3597



 Score = 38.1 bits (87), Expect = 6.4,   Method: Compositional matrix adjust.
 Identities = 41/156 (26%), Positives = 70/156 (44%), Gaps = 14/156 (8%)

Query: 76   RVKYWL--SNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVV 133
            R++Y +   ND+         G I+L     +  +  Y   V  +D +  +SA VN++V+
Sbjct: 2425 RLEYSILSGNDHKSFVIDGETGIITLSNPRRHTLKPFYSLNVSVSDGVFRSSARVNVTVM 2484

Query: 134  NVNDWDPRFRYPQYELFLPHIPLADLTP-GSVIGKVEAADGDKG--DRVTLSLRGPYEK- 189
              N   P F   +YE     + LA+  P  +++ +V+A D D G    +T  L   + K 
Sbjct: 2485 GGNLHSPVFHQNEYE-----VELAENAPLHTLVVQVKATDRDSGIYGHLTYHLVNDFAKD 2539

Query: 190  MFSINDSGHI---SIVDLSALNTSTIQLVVVATDTG 222
             F +ND G +     +D  A     I + ++A D G
Sbjct: 2540 RFYVNDGGQVFTLERLDREAPAEKVISVRLMAKDAG 2575


>gi|355750344|gb|EHH54682.1| hypothetical protein EGM_15570 [Macaca fascicularis]
          Length = 4349

 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 57/194 (29%), Positives = 91/194 (46%), Gaps = 23/194 (11%)

Query: 43   LQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGER---FSISRQ-GDIS 98
            L F +  YS + +E  PVN+++  ++      L   +W +   G++   F I +  G I 
Sbjct: 1347 LAFDETHYSFTVMETDPVNHMVGVISVEGRPGL---FWFNISGGDKDMDFDIEKTTGSIV 1403

Query: 99   LMQCLDYETEDSYRFTVYATDTLMTTSATVNISVV-NVNDWDPRFRYPQYELFLPHIPLA 157
            + + LD     SY  TV  TD   T +  V+I ++ N+N   P+F   +YE+ +P     
Sbjct: 1404 IARPLDTRRRSSYNLTVEVTDGSRTIATQVHIFMIANINHHRPQFLETRYEVRVPQ---- 1459

Query: 158  DLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSGHISIVDLSALNTSTIQLVVV 217
            D  PG  + +V+A D DKG  +  ++ G         D G  S   L  L+ ST  LV V
Sbjct: 1460 DTVPGVELLRVQAIDQDKGKSLIYTIHGS-------QDPGSAS---LFQLDPSTGVLVTV 1509

Query: 218  AT-DTGNPPRQASV 230
               D G+ P Q ++
Sbjct: 1510 GKLDLGSGPSQHTL 1523



 Score = 55.8 bits (133), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 63/201 (31%), Positives = 87/201 (43%), Gaps = 20/201 (9%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTT------NKPRDLRVKYWLSNDYGERFSISRQGD- 96
            +F+  EY  S +EN     +++T+ T       + R +   Y    D   +F IS+ GD 
Sbjct: 2905 RFASEEYRGSVVENSEPGKLVVTLKTLDADISEQNRQVTC-YITEGDPLGQFGISQVGDE 2963

Query: 97   --ISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHI 154
              IS  + LD E    Y   V A+D     S TV I V++VND  P+      +L     
Sbjct: 2964 WRISSRKTLDREHTAKYLLRVTASDGKFQASVTVEIFVLDVNDNSPQCS----QLVYTGK 3019

Query: 155  PLADLTPGSVIGKVEAA--DGDKGDRVTLSLRGPYEKMFSINDSGHISIVDLSALNTS-- 210
               D+ PG  I KV A   D D   ++T SL GP    F + D     +  L+AL+    
Sbjct: 3020 VHEDVFPGHFILKVSATDLDTDTNAQITYSLHGPGAHEFKL-DPHTGELTTLTALDRERK 3078

Query: 211  -TIQLVVVATDTGNPPRQASV 230
                LV  ATD G    QA V
Sbjct: 3079 DVFNLVAKATDGGGRSCQADV 3099



 Score = 55.1 bits (131), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 45/142 (31%), Positives = 69/142 (48%), Gaps = 16/142 (11%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYG----ERFSI-SRQGD 96
            F  + Y     EN+PV   ++ VT    +  RD +V Y LS D G    E F+I S  G 
Sbjct: 2797 FEADPYKAVLTENMPVGTSVIQVTAIDKDTGRDGQVSYRLSADPGSNVHELFAIDSESGW 2856

Query: 97   ISLMQCLDYETEDSYRFTVYATD----TLMTTSATVNISVVNVNDWDPRFRYPQYELFLP 152
            I+ +Q LD ET  +Y F V A D      +++ A V +S+ + ND  PRF   +Y   + 
Sbjct: 2857 ITTLQELDCETCQTYHFHVVAYDHGQTIQLSSQALVQVSITDENDNAPRFASEEYRGSV- 2915

Query: 153  HIPLADLTPGSVIGKVEAADGD 174
               + +  PG ++  ++  D D
Sbjct: 2916 ---VENSEPGKLVVTLKTLDAD 2934



 Score = 51.6 bits (122), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 58/225 (25%), Positives = 100/225 (44%), Gaps = 19/225 (8%)

Query: 28   LATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWL--S 82
            + T++V+    +    QF ++ YS   LEN  V  V+LTV+    + P +  + Y L   
Sbjct: 3304 VTTVVVNITDVNEHRPQFPQDPYSTRVLENALVGDVILTVSATDEDGPLNSDITYSLVGG 3363

Query: 83   NDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWD 139
            N  G      ++G++ + + LD+E   SY   + ATD+    +     + I V +VND  
Sbjct: 3364 NQLGHFTIHPKKGELQVAKALDWEQASSYSLKLRATDSGQPPLHEDTDIAIQVADVNDNP 3423

Query: 140  PRFRYPQYELFLPHIPLADLTP-GSVIGKVEAADGDK---GDRVTLSL-RGPYEKMFSIN 194
            PRF    Y        + + +P GS + ++  +D D    G   +  + +G     F + 
Sbjct: 3424 PRFFQLNYS-----TTVQENSPIGSKVLQLILSDPDSPENGPPYSFQITKGNDGSAFRVT 3478

Query: 195  DSGHISIVD-LSALNTSTIQLVVVATDTGNPPRQASVPAIMHFPE 238
              G +   + LS       QL + A+D+G PP  +S    +H  E
Sbjct: 3479 PDGWLVTAEGLSRRAQEWYQLQIQASDSGIPPLSSSTSVRVHVTE 3523



 Score = 46.2 bits (108), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 65/245 (26%), Positives = 101/245 (41%), Gaps = 29/245 (11%)

Query: 5    DDFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQ-------------FSKNEYS 51
            D +L  ITL  +   Y   ++Y L  +       SL+  +             F    Y 
Sbjct: 2119 DPYLGDITLK-KPFDYQALNKYRLKVIARDGGTPSLQSEEEVLVTVRNKSNPLFQSPYYK 2177

Query: 52   VSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGERFSIS--RQGDISLMQCLDYETED 109
            V   EN+ +   +L      P  LR+ Y +  +       +  + G +++   LDYE++ 
Sbjct: 2178 VRVPENITLYTPILHTQARSPEGLRLIYNIVEEEPLMLFTTDFKTGVLTVTGPLDYESKT 2237

Query: 110  SYRFTVYATDTLMT--TSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGK 167
             + FTV ATDT +   + ATV + V +VND  P F    Y   +    L   TP   + +
Sbjct: 2238 KHVFTVRATDTALGSFSEATVEVLVEDVNDNPPTFSQLVYTTSISE-GLPAQTP---VIQ 2293

Query: 168  VEAADGDKGDRVTLSLR-----GPYEKMFSINDS-GHISIV-DLSALNTSTIQLVVVATD 220
            + A+D D G    +S +         K F IN S G +S V +L         + V A D
Sbjct: 2294 LLASDRDSGQNRDVSYQIVEDGSDVSKFFQINGSTGEMSTVQELDYEAQQHFHVKVRAMD 2353

Query: 221  TGNPP 225
             G+PP
Sbjct: 2354 KGDPP 2358



 Score = 46.2 bits (108), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 65/242 (26%), Positives = 103/242 (42%), Gaps = 21/242 (8%)

Query: 10   PITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTT 69
            P TL V+A    +   + LAT+I+    +      FSK+EY V   E++PV   +L V+ 
Sbjct: 1625 PHTLTVKAEDQGSPQWHDLATVIIHVYPSDRSAPIFSKSEYFVEIPESIPVGSPILLVSA 1684

Query: 70   NKPRDLRVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDTLMT-TSATV 128
                ++  +    N  G     S  G IS  + LD+E   SY+  +  ++     T   V
Sbjct: 1685 MSSSEVTYELREGNKDGVFSMNSYSGLISTQKNLDHEKISSYQLKIRGSNMAGAFTDVMV 1744

Query: 129  NISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGK------VEAADGDKGDRVTLS 182
             + +++ ND  P F       F+  I  A      ++ K      + A+D DK     L 
Sbjct: 1745 VVDIIDENDNAPMFL---KSTFVGQISEAAPLYSMIMDKNNNPFVIHASDSDKETNSLLV 1801

Query: 183  ---LRGPYEKMFSINDS-GHISIV-DLSALNTSTIQLVVVATDTGNP----PRQASVPAI 233
               L     K F I+ S G ++IV ++   +  + Q  V   D G+P    PR A V  I
Sbjct: 1802 YKILEPEALKFFKIDPSMGTLTIVSEMDYESMPSFQFCVYVHDQGSPILFAPRPAQV--I 1859

Query: 234  MH 235
            +H
Sbjct: 1860 IH 1861



 Score = 45.8 bits (107), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 48/143 (33%), Positives = 75/143 (52%), Gaps = 11/143 (7%)

Query: 95   GDISLMQCLDYETEDSYRFTVYATD----TLMTTSATVNISVVNVNDWDPRFRYPQYELF 150
            G +S  + LD E +D +   V   D    +L +TS  V I +++VND  P F +  + + 
Sbjct: 1192 GLLSTARQLDRENKDEHILEVTVLDNGEPSLKSTSRVV-IGILDVNDNPPVFSHKLFNVR 1250

Query: 151  LPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIND-SGHISIVDLSAL 207
            LP   L+ ++ G V  ++ A+D D+G   RVT S++   E+ FSI+  +G +S       
Sbjct: 1251 LPER-LSPVSSGPVY-RLVASDLDEGLNGRVTYSIKESDEEGFSIDPVTGVVSSSSTFTA 1308

Query: 208  NTSTIQLVVVATDTGNPPRQASV 230
                I L + ATD+G PP  ASV
Sbjct: 1309 GEYNI-LTIKATDSGQPPLSASV 1330



 Score = 42.7 bits (99), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 65/229 (28%), Positives = 98/229 (42%), Gaps = 18/229 (7%)

Query: 10   PITLVVRAIQYDNQDRYA-LATLIVSKAGTSLRELQFSKNEYSVSALENLPVN-YVLLTV 67
            P+ L VRA         + L T+ VS  G       F   E+SV   E+ P    VL   
Sbjct: 3182 PLELTVRASDLGTPISLSTLGTVTVSVVGLEDYLPVFLNTEHSVQVPEDAPPGTEVLQLA 3241

Query: 68   TTNKPRDLRVKYWL--SNDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDTLMTT 124
            T  +P   +  Y +   N+ G RF + +R G + +   LD+ET   Y  ++  +    ++
Sbjct: 3242 TLTRPGAEKTGYRMVSGNEQG-RFRLDARTGILYVNASLDFETSPKYFLSIECSRKSSSS 3300

Query: 125  SATVNISVVN---VNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDK--GDRV 179
             + V   VVN   VN+  P+F    Y   +    L +   G VI  V A D D      +
Sbjct: 3301 LSDVTTVVVNITDVNEHRPQFPQDPYSTRV----LENALVGDVILTVSATDEDGPLNSDI 3356

Query: 180  TLSLRGPYE-KMFSIN-DSGHISIVD-LSALNTSTIQLVVVATDTGNPP 225
            T SL G  +   F+I+   G + +   L     S+  L + ATD+G PP
Sbjct: 3357 TYSLVGGNQLGHFTIHPKKGELQVAKALDWEQASSYSLKLRATDSGQPP 3405



 Score = 42.0 bits (97), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 43/154 (27%), Positives = 71/154 (46%), Gaps = 15/154 (9%)

Query: 51  SVSALENLPVNYVLLTVTTNKPR---DLRVKYWLSNDYGER-FSISRQ-GDISLMQCLDY 105
           S+  LE++P+N  L  +    P    + ++ Y +++   E  F I  + G +++   LDY
Sbjct: 721 SIDVLESVPINTPLARLAATDPDAGFNGKLVYVIADGNEEGCFDIELETGLLTVAAPLDY 780

Query: 106 ETEDSYRFTVYATDTLMTTSATVNISVVNVNDWD---PRFRYPQYELFLPHIPLADLTPG 162
           E  + Y   V   D      ++  +  VNV DW+   PRF    Y+L +      D   G
Sbjct: 781 EATNFYILNVTVYDLGTPQKSSWKLLTVNVKDWNDNAPRFPPGGYQLTISE----DTEVG 836

Query: 163 SVIGKVEAADGDKGD--RVTLSLRGPYEKMFSIN 194
           + I ++   D D  D  RV  +L  P EK FS++
Sbjct: 837 TTIAELTTKDADSEDNGRVRYTLLSPTEK-FSLH 869



 Score = 41.6 bits (96), Expect = 0.74,   Method: Compositional matrix adjust.
 Identities = 39/133 (29%), Positives = 68/133 (51%), Gaps = 14/133 (10%)

Query: 95   GDISLMQCLDYETEDSYRFTVYATDT-----LMTTSATVNISVVNVNDWDPRFRYPQYEL 149
            G ++++  +DYE+  S++F VY  D           A V I V +VND  PRF    YE+
Sbjct: 1820 GTLTIVSEMDYESMPSFQFCVYVHDQGSPILFAPRPAQVIIHVRDVNDSPPRFSEQIYEV 1879

Query: 150  FLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSIND-SGHISIVDLSAL 207
             +    +  + PG  +  V A+D D    V  S++ G  ++  +I+  +G IS+++ + L
Sbjct: 1880 AI----VGPIHPGMELLMVRASDDDS--EVNYSIKTGNADEAVTIHPITGSISVLNPALL 1933

Query: 208  NTSTIQLVVVATD 220
              S  +L + A+D
Sbjct: 1934 GLSR-KLTIRASD 1945



 Score = 40.0 bits (92), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 57/202 (28%), Positives = 87/202 (43%), Gaps = 24/202 (11%)

Query: 41   RELQFSKNEYSVSALENLPVN--YVLLTVTTNKPRDLRVKYWLSNDYGERFSISRQGDIS 98
            + LQF ++ Y+ +  E+L      V+L    N   D  + Y+L N       +   G + 
Sbjct: 1964 KSLQFDQDVYTAAVKEDLQDRKALVILGAQGNHLNDT-LSYFLLNGTDMFHMVQSAGVLQ 2022

Query: 99   LMQ-CLDYETEDSYRFTVYATDTLM---TTSATVNISVVNVNDWDPRFRY-PQYELFLPH 153
                  D E +D++   V   D         A V +S+ +VND  P+F++ P Y +    
Sbjct: 2023 TRGVAFDREQQDTHELAVEVRDNRTPQRVAQALVRVSIEDVNDNPPKFKHLPYYTI---- 2078

Query: 154  IPLADLT-PGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDS-GHISI---VDLSA 206
              + D T PG V+ +V A D D G    VT      Y   F I+   G I++    D  A
Sbjct: 2079 --IQDGTEPGDVLFQVSATDEDLGTNGAVTYEFAEDY-TYFRIDPYLGDITLKKPFDYQA 2135

Query: 207  LNTSTIQLVVVATDTGNPPRQA 228
            LN    +L V+A D G P  Q+
Sbjct: 2136 LN--KYRLKVIARDGGTPSLQS 2155



 Score = 39.7 bits (91), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 55/198 (27%), Positives = 90/198 (45%), Gaps = 23/198 (11%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTTNKPRD------LRVKYWLSNDYGERFSISRQ-GD 96
            +FS+  Y+ SALE+LP    +  V     +D      +R     SN  G  FS+    G 
Sbjct: 2690 KFSEPLYTFSALEDLPEGSEIGVVKAVAAQDPVIYSLVRGTTPESNKDG-VFSLDPDTGV 2748

Query: 97   ISLMQCLDYETEDSYRFTVYA---TDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
            I + + +D+E+   Y+  V A    ++ + +  +VNI V +VND  P F    Y+  L  
Sbjct: 2749 IKVRKPMDHESTKLYQIDVMAHCLQNSDVVSLVSVNIQVGDVNDNRPVFEADPYKAVL-- 2806

Query: 154  IPLADLTPGSVIGKVEAADGDKGDRVTLSLR------GPYEKMFSIN-DSGHISIV-DLS 205
                ++  G+ + +V A D D G    +S R          ++F+I+ +SG I+ + +L 
Sbjct: 2807 --TENMPVGTSVIQVTAIDKDTGRDGQVSYRLSADPGSNVHELFAIDSESGWITTLQELD 2864

Query: 206  ALNTSTIQLVVVATDTGN 223
                 T    VVA D G 
Sbjct: 2865 CETCQTYHFHVVAYDHGQ 2882


>gi|391334511|ref|XP_003741647.1| PREDICTED: fat-like cadherin-related tumor suppressor homolog
            [Metaseiulus occidentalis]
          Length = 4558

 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 48/156 (30%), Positives = 74/156 (47%), Gaps = 10/156 (6%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVK----YWLSNDYGERFSISRQGDISLM 100
            FS++ Y V   E+ PVN  + T+    P D + +    Y  S D    F +S  G + + 
Sbjct: 2942 FSRDLYDVEVDEDAPVNTEIFTLEIQDPDDPKSQTMYFYLTSGDDRNHFGLSDTGVLFVR 3001

Query: 101  QCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLT 160
            Q LD E+++ Y   + A+D L   +  V+I + + ND  P     +Y   +  +   D++
Sbjct: 3002 QPLDRESQEHYILEIAASDGLHVANTKVSIRLRDANDNGPVCIQSKY---IEQVK-EDVS 3057

Query: 161  PGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIN 194
            PGS I  V A D D G    +  SLRG   + F IN
Sbjct: 3058 PGSYILTVAAKDADIGINAEMRFSLRGKGHEQFIIN 3093



 Score = 48.5 bits (114), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 60/192 (31%), Positives = 96/192 (50%), Gaps = 17/192 (8%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTTNKPRDL----RVKYWLSNDYGERFSI-SRQGDIS 98
            QF K+ Y+V+  E+  +  VL+ +     RD+    +V Y L +  G  F I S  G I 
Sbjct: 3146 QFLKDNYTVAIQEDAEIGTVLMKIYATD-RDVGINRKVSYSLMDSAGGYFEIQSNTGIIQ 3204

Query: 99   LMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIP 155
            LM+ LD E+ DSYR  V A D     ++++ +VN+ V++VND  P F    Y        
Sbjct: 3205 LMKTLDRESVDSYRLAVEAIDHGQPRLSSAVSVNVVVLDVNDNPPEFTKKMY-----FAN 3259

Query: 156  LADLTP-GSVIGKVEAADGDKGDRVTLSLRGPYEKMFSIN-DSGHISIV-DLSALNTSTI 212
            ++++ P G+ + +V+A   D G    +S +      F I+ +SG +S++  L     +  
Sbjct: 3260 ISEMAPHGTHVAQVKAFSRDIGINAEISYKLENADNFDIDPESGIVSVMRSLDYETQAQY 3319

Query: 213  QLVVVATDTGNP 224
             L VVA D G P
Sbjct: 3320 MLSVVAQDGGTP 3331



 Score = 47.8 bits (112), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 51/194 (26%), Positives = 90/194 (46%), Gaps = 20/194 (10%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGERFSISRQGDISLMQ 101
            F K+ Y+    E++    V++ +     ++  + +++Y LS +  +     + G + + +
Sbjct: 841  FEKSLYTFKISESVNKGAVMVKLRATDADEGDNAKIRYKLSTETDDFIVDEKAGILIVHR 900

Query: 102  CLDYETEDSYRFTVYATDTL----MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLA 157
             LD E +  Y   V ATD+     +T +  VNI V +VND  PRF    Y   +      
Sbjct: 901  NLDRERQSEYNLMVKATDSSIELPLTGTTMVNIQVQDVNDERPRFTLKNYIARVRE---- 956

Query: 158  DLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-DSGHISIVDLSALNTSTIQ 213
            DL  GSVI  + A D D  D   +S   +      +F I+ ++G + ++    L+  T Q
Sbjct: 957  DLPKGSVIMTMAAQDPDLDDAGKVSYQLMSKELRNLFEIDSETGIVRLI--GELDFETNQ 1014

Query: 214  L---VVVATDTGNP 224
            L    + A+D+G P
Sbjct: 1015 LYNVTIRASDSGEP 1028



 Score = 47.8 bits (112), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 40/133 (30%), Positives = 61/133 (45%), Gaps = 9/133 (6%)

Query: 103  LDYETEDSYRFTVYATD--TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLT 160
             D E +  YR  V A    T    S  +++++ +VND  P F    Y   +P     +  
Sbjct: 2060 FDREQQADYRLVVNAVALATERVASTLIDVTIEDVNDNAPTFVDTPYHCVVP----IESN 2115

Query: 161  PGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIND-SGHISIVDLSALNTSTIQLVVV 217
             G  + KV A D D G   RV   LR  ++ +F I+  SG+I++      + +   + VV
Sbjct: 2116 KGEQVQKVRAEDPDDGANGRVLYYLRDLHKGVFDIDSKSGNITLRKRLPSHMTQYTITVV 2175

Query: 218  ATDTGNPPRQASV 230
            A D GNPP  + V
Sbjct: 2176 AKDEGNPPMYSEV 2188



 Score = 47.0 bits (110), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 43/156 (27%), Positives = 77/156 (49%), Gaps = 12/156 (7%)

Query: 77   VKYWLSNDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDTL---MTTSATVNISV 132
            +++ L     E+F I S  G++ + + LD ET+ SY  T +  D+     + ++++ I V
Sbjct: 3078 MRFSLRGKGHEQFIINSTTGELRVSKALDRETQSSYLLTAHVQDSQHMEWSCTSSIRIMV 3137

Query: 133  VNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKM 190
             ++ND  P+F    Y + +      D   G+V+ K+ A D D G   +V+ SL       
Sbjct: 3138 SDINDCAPQFLKDNYTVAIQE----DAEIGTVLMKIYATDRDVGINRKVSYSLMDSAGGY 3193

Query: 191  FSI-NDSGHISIVD-LSALNTSTIQLVVVATDTGNP 224
            F I +++G I ++  L   +  + +L V A D G P
Sbjct: 3194 FEIQSNTGIIQLMKTLDRESVDSYRLAVEAIDHGQP 3229



 Score = 47.0 bits (110), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 59/196 (30%), Positives = 91/196 (46%), Gaps = 13/196 (6%)

Query: 45   FSKNEYSVSALEN-LPVNYVLLTVTTNKPRDLRVKYWLS-NDYGERFSISRQ-GDISLMQ 101
            F K  YS    EN LP   VL T+    P    + Y ++   + E F +  Q G + + +
Sbjct: 2202 FQKQFYSAHVKENHLPTEPVL-TLIAQSPGGKPLIYDITEGHHKEDFRLDYQAGVMYVNE 2260

Query: 102  CLDYETEDSYRFTVYATDTL--MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADL 159
             LD++    Y  TV ATD+L    +  +V I V +VN+  P F    Y + +  +     
Sbjct: 2261 ELDFDKTAKYDLTVRATDSLSGAHSDVSVTIYVEDVNNHPPLFEQIMYNVSVSEVS---- 2316

Query: 160  TPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSGHISI-VDLSALNTSTIQLVVVA 218
             PGS I  V A D D    ++ S+    ++    + +G IS+   L     S I L V+A
Sbjct: 2317 PPGSSILTVRAHDKDSNSVISYSVEDS-DRFIIDSKTGVISLRRSLDYERHSRITLTVMA 2375

Query: 219  TDTGNPPRQASVPAIM 234
            TD+G PP+  S  A++
Sbjct: 2376 TDSG-PPQPLSSTALV 2390



 Score = 45.1 bits (105), Expect = 0.067,   Method: Compositional matrix adjust.
 Identities = 57/204 (27%), Positives = 89/204 (43%), Gaps = 29/204 (14%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPR-----DLRVKYWLSNDYGERFSI-SRQGDIS 98
           F++ +Y V   E  P N  ++ V+ + P      D+ V    + D    F I S+ G IS
Sbjct: 350 FNREDYDVQIDEVAPPNSPIVRVSAHLPHEEKHNDVIVYRIETGDEDGVFDINSKTGQIS 409

Query: 99  LMQCLDYETEDSYRFTVYATDT----------LMTTSATVNISVVNVNDWDPRFRYPQYE 148
             + LD E    Y  TV AT+T              +  VNI+V++ ND  PRF      
Sbjct: 410 TNKWLDREQRRYYSLTVSATNTKSRSTRHRTGAAVATTIVNINVLDCNDNAPRFNQSIRS 469

Query: 149 LFL--PHIPLADLTPGSVIGKVEAADGDKGDR--VTLSLRGPYEKMFSIND-SGHISI-- 201
           +     ++P+     G+ +  V A D D  +   VT +L    +  F IN  +G +S   
Sbjct: 470 VVTIDENVPI-----GTKVVTVSATDADDEENGYVTFALANTNKIPFKINPFTGVVSTTD 524

Query: 202 -VDLSALNTSTIQLVVVATDTGNP 224
            +D   +++S   L + ATD G P
Sbjct: 525 NIDYEKMSSSFYLLRIRATDWGTP 548



 Score = 44.3 bits (103), Expect = 0.097,   Method: Compositional matrix adjust.
 Identities = 31/104 (29%), Positives = 52/104 (50%), Gaps = 10/104 (9%)

Query: 77   VKYWLSNDYGERFSIS-RQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISV 132
            + Y L N   + F I    G +S+M+ LDYET+  Y  +V A D     ++++  +N++V
Sbjct: 3286 ISYKLEN--ADNFDIDPESGIVSVMRSLDYETQAQYMLSVVAQDGGTPALSSTTLLNVTV 3343

Query: 133  VNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG 176
            ++ ND  P F   +Y   +      D   G  I +++A D D G
Sbjct: 3344 LDFNDNRPTFDKGRYNSVIRE----DTKVGERILQIQATDADSG 3383



 Score = 42.0 bits (97), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 41/136 (30%), Positives = 65/136 (47%), Gaps = 12/136 (8%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTT-NKPRDLRVKYWLSNDYGERFSI-SRQGDISLMQC 102
            F +  Y+VS  E  P    +LTV   +K  +  + Y + +   +RF I S+ G ISL + 
Sbjct: 2303 FEQIMYNVSVSEVSPPGSSILTVRAHDKDSNSVISYSVED--SDRFIIDSKTGVISLRRS 2360

Query: 103  LDYETEDSYRFTVYATDTL----MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLAD 158
            LDYE       TV ATD+     ++++A V I V ++ND  P F  P  +  +  +    
Sbjct: 2361 LDYERHSRITLTVMATDSGPPQPLSSTALVFIQVTDINDSPPVFDRPVVDCSISQLARR- 2419

Query: 159  LTPGSVIGKVEAADGD 174
               G  +  + A+D D
Sbjct: 2420 ---GQFVAHLGASDPD 2432



 Score = 38.9 bits (89), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 36/137 (26%), Positives = 62/137 (45%), Gaps = 11/137 (8%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWL-SNDYGERFSIS-RQGDIS 98
            +F+  EY     EN   +  ++TV+    ++ +  RVKY + S +    F++    G++ 
Sbjct: 2527 KFTHFEYEAIVPENSSASTYIITVSAADQDRGQYGRVKYSIQSEEMTHYFTLDPDTGELR 2586

Query: 99   LMQCLDYETEDSYRFTVYATDT-LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLA 157
              + LD E    Y+  + A D       + V ++V + ND  P+F  P+Y        + 
Sbjct: 2587 TKRTLDREKRSLYKIAIVAEDGGARIGHSVVRVTVTDENDNPPQFLLPEYRC-----NVK 2641

Query: 158  DLTPGSVIGKVEAADGD 174
            + T G  I KV A D D
Sbjct: 2642 NFTTGQAILKVTATDQD 2658



 Score = 38.1 bits (87), Expect = 7.8,   Method: Compositional matrix adjust.
 Identities = 47/157 (29%), Positives = 69/157 (43%), Gaps = 14/157 (8%)

Query: 89   FSISRQGDISLMQCLDYETEDSYRFTVYATDTL---MTTSATVNISVVNVNDWDPRFRYP 145
            FSI  +G I     LD E +  Y   V ATD     +++   V + V +VND  P  + P
Sbjct: 1103 FSIDDKGTIRSRSVLDCENKPYYWLVVSATDRAAVPLSSRLDVYVKVNDVNDNAPLSKLP 1162

Query: 146  QYELFLPHIPLADLTPGSVIGKVEAADGDKG---DRVTLSL-RGPYEKMFSIND-SGHIS 200
             Y+  +     A++   SV+G +EA D D     D +T  +  G  +  F I+  SG I+
Sbjct: 1163 YYKGTVLEDSAANV---SVLG-LEAFDNDHTANMDNITFRITAGDPQGHFHIDTYSGRIT 1218

Query: 201  IVD--LSALNTSTIQLVVVATDTGNPPRQASVPAIMH 235
              D  L         L V  TD G PP  +    ++H
Sbjct: 1219 TTDRRLDREIQDKFLLDVTITDDGTPPLSSVTQVLIH 1255


>gi|351707763|gb|EHB10682.1| Protocadherin Fat 2 [Heterocephalus glaber]
          Length = 4349

 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 72/267 (26%), Positives = 119/267 (44%), Gaps = 43/267 (16%)

Query: 3    NEDDF-LQPITLVVRAIQYDNQDRYALATLIVSKAG-----TSLR--------------E 42
            +E+ F + P+T VV +       +Y + T+  + +G     TS+R               
Sbjct: 1284 DEEGFSIDPVTGVVSSSSTFTAGKYNILTIKATDSGQPPLSTSVRLHVEWIPQPRPSSIP 1343

Query: 43   LQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGER---FSISRQ-GDIS 98
            L F +  YS + +E  PVN+++  ++      L   +W     G++   F I +  G I 
Sbjct: 1344 LAFDEMPYSFTVMETDPVNHMVGVLSVEGRPGL---FWFHITGGDKDMDFDIEKTTGSIV 1400

Query: 99   LMQCLDYETEDSYRFTVYATDTLMTTSATVNISVV-NVNDWDPRFRYPQYELFLPHIPLA 157
            + + LD  T  SY  TV  TD   T +  V I ++ NVN   P+F    YE+ +P     
Sbjct: 1401 IARPLDTRTGSSYNLTVEVTDGFHTIATQVYIFLIANVNRHRPQFLEAHYEVSVPQ---- 1456

Query: 158  DLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSGHISIVDLSALNTSTIQLVVV 217
            D  PG  + +V+A D DKG  +  +++G         D G  S   L  L+ ST  LV V
Sbjct: 1457 DTLPGVELLRVQATDQDKGKGLIYTIQGS-------QDPGSAS---LFQLDPSTGILVTV 1506

Query: 218  AT-DTGNPPRQASVPAIMHFPEAIVQQ 243
               D G+ P Q ++  ++   E  +++
Sbjct: 1507 GKLDLGSGPSQHTLTVMVRDQEMPIKR 1533



 Score = 55.5 bits (132), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 45/155 (29%), Positives = 72/155 (46%), Gaps = 23/155 (14%)

Query: 11   ITLVVRAIQYDNQDRYALATLIVSKAGTSLREL---------------QFSKNEYSVSAL 55
            I  V R++ ++   +Y L+     KA +SL ++               QF K+ YS   L
Sbjct: 3276 ILYVNRSLDFETSPKYFLSIECSRKASSSLSDVTTVVVNITDVNEHRPQFPKDLYSTRVL 3335

Query: 56   ENLPVNYVLLTVTT---NKPRDLRVKYWL--SNDYGERFSISRQGDISLMQCLDYETEDS 110
            EN  V  V+LTVT    + P +  + Y L   N  G       +G + + + LD+E   S
Sbjct: 3336 ENAIVGDVILTVTATDEDGPLNSAITYSLVGGNQLGHFAVHPEKGALQVAKALDWEQTPS 3395

Query: 111  YRFTVYATDT---LMTTSATVNISVVNVNDWDPRF 142
            Y   + ATD+    +   A V++ V+++ND  PRF
Sbjct: 3396 YSLKLRATDSGQPPLHADADVDVQVLDINDNPPRF 3430



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 59/200 (29%), Positives = 86/200 (43%), Gaps = 18/200 (9%)

Query: 44   QFSKNEYSVSALEN-----LPVNYVLLTVTTNKPRDLRVKYWLSNDYGERFSISRQGD-- 96
            QF   +Y+ S +EN     L     +L    ++       Y    D   +F I + GD  
Sbjct: 2905 QFVSEDYTGSVVENSEPGELVATLKILDADISEQNRQVTCYITEGDPLGQFGIHQAGDEW 2964

Query: 97   -ISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIP 155
             IS  + LD E    Y   + A+D    TS  V ISV++VND  P+       L++  + 
Sbjct: 2965 RISSRKTLDREHTAKYLLRITASDGKFQTSVPVEISVLDVNDNSPQC---TQLLYISRV- 3020

Query: 156  LADLTPGSVIGKVEA--ADGDKGDRVTLSLRGPYEKMFSINDSGHISIVDLSALNTS--- 210
              D++PG+ I KV A  +D D   ++  SL GP    F + D     +  L+AL+     
Sbjct: 3021 REDVSPGAFILKVSATDSDADTNAQIMYSLHGPGAHEFKL-DPHTGELTTLTALDRERKD 3079

Query: 211  TIQLVVVATDTGNPPRQASV 230
                V  ATD G    QA V
Sbjct: 3080 MYSFVAKATDGGGRSCQADV 3099



 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 62/192 (32%), Positives = 93/192 (48%), Gaps = 20/192 (10%)

Query: 45   FSKNEYSVSALENLPVN---YVLLTVTTNKPRDLRVKYWL---SNDYGERFSIS-RQGDI 97
            FS+  Y+ S  E LP +     LL    +  ++  V Y +    +D    F I+   G+I
Sbjct: 2269 FSQLVYTTSVSEGLPAHTPVIQLLASDQDSGQNRDVSYQIVEDGSDVSTFFQINGSTGEI 2328

Query: 98   SLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHI 154
              +Q LDYE +  +   V A D     +T    V ++V +VND  P FR PQYE  +  +
Sbjct: 2329 FTLQELDYEAQQHFHVKVRAMDRGDPPLTGETLVVVNVSDVNDNPPEFRQPQYEASVSEL 2388

Query: 155  PLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-DSGHISIVDLSA--LN 208
                 T G ++ KV+A D D  +   L    L G  ++ FSIN  SG IS+ +L    L+
Sbjct: 2389 ----ATCGHLVLKVQALDPDSREATRLEYLILSGNQDRHFSINRSSGVISMFNLCKKQLD 2444

Query: 209  TSTIQLVVVATD 220
            +S+  L V A+D
Sbjct: 2445 SSSYSLRVGASD 2456



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 44/142 (30%), Positives = 67/142 (47%), Gaps = 16/142 (11%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKP---RDLRVKYWLSNDYG----ERFSI-SRQGD 96
            F  + Y     EN+P    ++ VT N      D +V Y LS + G    E F+I S  G 
Sbjct: 2797 FEADPYKAFLTENMPGGTTVIQVTANDEDTGNDGQVSYRLSMEQGSNVHELFAIDSETGW 2856

Query: 97   ISLMQCLDYETEDSYRFTVYATDTLMT----TSATVNISVVNVNDWDPRFRYPQYELFLP 152
            I+ ++ LD ET  +YRF V A D   T    + A V +SV++ ND  P+F    Y   + 
Sbjct: 2857 ITTLKELDCETYQTYRFHVVAYDHGQTIQLASRALVEVSVIDENDNAPQFVSEDYTGSV- 2915

Query: 153  HIPLADLTPGSVIGKVEAADGD 174
               + +  PG ++  ++  D D
Sbjct: 2916 ---VENSEPGELVATLKILDAD 2934



 Score = 46.2 bits (108), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 55/195 (28%), Positives = 83/195 (42%), Gaps = 22/195 (11%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTTNKP---RDLRVKYW-LSNDYGERFSISRQ-GDIS 98
            +F + +Y  S  E     +++L V    P      R++Y  LS +    FSI+R  G IS
Sbjct: 2375 EFRQPQYEASVSELATCGHLVLKVQALDPDSREATRLEYLILSGNQDRHFSINRSSGVIS 2434

Query: 99   LMQ-CLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLA 157
            +   C       SY   V A+D +   +  V I+  N N + P F+   YE  L      
Sbjct: 2435 MFNLCKKQLDSSSYSLRVGASDGIFRATVPVYINTTNANKYSPAFQQHIYEAELAE---- 2490

Query: 158  DLTPGSVIGKVEAADGDKGDRVTLS------LRGPYEKMFSINDSGHISIVDLSALNTST 211
            +   G+ + ++ A D D G   T+       L G   + FSIN SG I+ +       ST
Sbjct: 2491 NAKEGTKVIELLAIDKDSGPYGTVEYTIINKLAG---EKFSINPSGQITTLQKLDRENST 2547

Query: 212  ---IQLVVVATDTGN 223
               I + V+A D G 
Sbjct: 2548 ERVIAIKVMARDGGG 2562



 Score = 45.1 bits (105), Expect = 0.058,   Method: Compositional matrix adjust.
 Identities = 54/197 (27%), Positives = 81/197 (41%), Gaps = 25/197 (12%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGERFSIS--RQGDISLMQC 102
            F    Y V   EN+ +   +L      P  LR+ Y +  +       +  + G +++   
Sbjct: 2168 FQSPYYKVRVPENIALYTPILHTQARSPEGLRLIYNIVEEESLMLFTTDFKTGVLTVTGP 2227

Query: 103  LDYETEDSYRFTVYATDTLMT--TSATVNISVVNVNDWDPRFRYPQY-----ELFLPHIP 155
            LDYE++  + FTV ATDT +   + ATV + V +VND  P F    Y     E    H P
Sbjct: 2228 LDYESKTKHVFTVRATDTALGSFSEATVEVLVEDVNDNPPTFSQLVYTTSVSEGLPAHTP 2287

Query: 156  LADLTPGSVIGKVEAADGDKGDRVTLSLR-----GPYEKMFSINDS-GHI-SIVDLSALN 208
            +  L          A+D D G    +S +           F IN S G I ++ +L    
Sbjct: 2288 VIQLL---------ASDQDSGQNRDVSYQIVEDGSDVSTFFQINGSTGEIFTLQELDYEA 2338

Query: 209  TSTIQLVVVATDTGNPP 225
                 + V A D G+PP
Sbjct: 2339 QQHFHVKVRAMDRGDPP 2355



 Score = 45.1 bits (105), Expect = 0.067,   Method: Compositional matrix adjust.
 Identities = 44/143 (30%), Positives = 74/143 (51%), Gaps = 11/143 (7%)

Query: 95   GDISLMQCLDYETEDSYRFTVYATD----TLMTTSATVNISVVNVNDWDPRFRYPQYELF 150
            G +S  + LD E++D +   V   D    +L +TS  V + ++++ND  P F +  + + 
Sbjct: 1189 GLLSTARQLDRESKDEHILEVTVLDNGEPSLKSTSRVV-VCILDINDNAPVFSHKLFSVR 1247

Query: 151  LPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIND-SGHISIVDLSAL 207
            LP  P + ++PG+V  ++ A+D D G    +T S+    E+ FSI+  +G +S       
Sbjct: 1248 LPERP-SPVSPGAVY-RLVASDPDDGLNGSITYSIEESDEEGFSIDPVTGVVSSSSTFTA 1305

Query: 208  NTSTIQLVVVATDTGNPPRQASV 230
                I L + ATD+G PP   SV
Sbjct: 1306 GKYNI-LTIKATDSGQPPLSTSV 1327



 Score = 41.2 bits (95), Expect = 0.76,   Method: Compositional matrix adjust.
 Identities = 44/155 (28%), Positives = 73/155 (47%), Gaps = 17/155 (10%)

Query: 51  SVSALENLPVNYVLLTVTTNKPR---DLRVKYWLS--NDYGERFSISRQ-GDISLMQCLD 104
           S+  LE++P++  L  +    P    + ++ Y ++  N+ G  F I  + G +++   LD
Sbjct: 718 SIDVLEHVPIDTSLARLAATDPDAGFNGKLVYVIADGNEAG-CFDIELETGLLTVAAPLD 776

Query: 105 YETEDSYRFTVYATDTLMTTSATVNISVVNVNDWD---PRFRYPQYELFLPHIPLADLTP 161
           YET   Y   V   D      ++  +  VNV DW+   PRF    Y+L +      D   
Sbjct: 777 YETTSFYLLNVTVYDLGTPQLSSWKLLTVNVKDWNDNAPRFPPGGYQLTISE----DTEV 832

Query: 162 GSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSIN 194
           G+ I +++  D D  D  RV  +L  P EK FS++
Sbjct: 833 GTTIAELKTKDADSEDNGRVRYTLLSPTEK-FSLH 866



 Score = 41.2 bits (95), Expect = 0.95,   Method: Compositional matrix adjust.
 Identities = 35/113 (30%), Positives = 53/113 (46%), Gaps = 9/113 (7%)

Query: 128  VNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LR 184
            V I V + N   PRF    YE  +P      + PGS + +V A D D+G    +    L+
Sbjct: 1538 VTIRVKDGNLHPPRFTQLHYEARVPDT----IVPGSEVLQVRAVDADRGANAEVHYSLLK 1593

Query: 185  GPYEKMFSIND-SGHISIVD-LSALNTSTIQLVVVATDTGNPPRQASVPAIMH 235
            G  E +F+I+   G I++   L+  N     L+V A D G+P R      ++H
Sbjct: 1594 GNSEDLFNIDILQGIITVAQKLNQANHIQHTLIVKAEDQGSPRRHDLATVVVH 1646



 Score = 40.8 bits (94), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 59/202 (29%), Positives = 89/202 (44%), Gaps = 26/202 (12%)

Query: 41   RELQFSKNEYSVSALENLPVN--YVLLTVTTNKPRDLRVKYWLSNDYGERFSISRQGDIS 98
            + L+F ++ Y  +  ENL      V+L V  +   D  + Y+L N   + F +++   + 
Sbjct: 1961 KSLRFDQDVYRAAVKENLQDRKALVILGVQGSHLNDA-LSYFLLNGT-DLFHVAKSAGVL 2018

Query: 99   LMQ--CLDYETEDSYRFTVYATDTLM---TTSATVNISVVNVNDWDPRFRY-PQYELFLP 152
              +    D E +D +   V   D         A V +SV ++ND  P F + P Y +   
Sbjct: 2019 QTRGVAFDREQQDIHEVVVEVRDDRAPQRVAQALVRVSVEDINDNPPEFHHLPYYTI--- 2075

Query: 153  HIPLADLT-PGSVIGKVEAADGDKGDR--VTLSLRGPYEKMFSINDS-GHISI---VDLS 205
               + D T PG V+ +V A D D G    VT +    Y   F I+   G IS+    D  
Sbjct: 2076 ---IQDGTEPGDVLFQVSATDKDLGANGTVTYAFTEDY-TYFRIDPYVGDISLKKPFDYQ 2131

Query: 206  ALNTSTIQLVVVATDTGNPPRQ 227
            ALN    +L V+A D G PP Q
Sbjct: 2132 ALN--KYRLKVIARDGGTPPLQ 2151



 Score = 40.8 bits (94), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 36/142 (25%), Positives = 65/142 (45%), Gaps = 2/142 (1%)

Query: 2    INEDDFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVN 61
            +N+ + +Q  TL+V+A    +  R+ LAT++V    +      FS  EY V   E++P+ 
Sbjct: 1615 LNQANHIQH-TLIVKAEDQGSPRRHDLATVVVHVCPSDSSVPMFSSTEYFVEVPESIPIG 1673

Query: 62   YVLLTVTTNKPRDLRVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDTL 121
              +  V+     ++  +    N  G     S  G IS  + LD+E   SY+  +  ++  
Sbjct: 1674 SPIFLVSATTRSEVTYELREGNKDGVFSMNSYSGLISTQKNLDHEKISSYQLKIRGSNMA 1733

Query: 122  MT-TSATVNISVVNVNDWDPRF 142
               T   V + +++ ND  P F
Sbjct: 1734 GAFTDIIVLVYIIDENDNAPMF 1755



 Score = 40.8 bits (94), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 55/211 (26%), Positives = 98/211 (46%), Gaps = 13/211 (6%)

Query: 28   LATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTT-NKPRDLRVKYWL--SND 84
            L T+ VS  G       F   E+ +   E+ P    +L++    +P   +  Y +   N+
Sbjct: 3205 LGTVAVSVVGLEDYLPVFLAAEHGLQVREDAPPGAQVLSLAALARPGAQKTGYRIVGGNE 3264

Query: 85   YGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDP-RF 142
             G RF + +R G + + + LD+ET   Y  ++  +    ++ + V   VVN+ D +  R 
Sbjct: 3265 QG-RFRLDARTGILYVNRSLDFETSPKYFLSIECSRKASSSLSDVTTVVVNITDVNEHRP 3323

Query: 143  RYPQYELFLPHIPLADLTPGSVIGKVEAADGDK--GDRVTLSLRGPYE-KMFSIN-DSGH 198
            ++P+ +L+   + L +   G VI  V A D D      +T SL G  +   F+++ + G 
Sbjct: 3324 QFPK-DLYSTRV-LENAIVGDVILTVTATDEDGPLNSAITYSLVGGNQLGHFAVHPEKGA 3381

Query: 199  ISIVD-LSALNTSTIQLVVVATDTGNPPRQA 228
            + +   L    T +  L + ATD+G PP  A
Sbjct: 3382 LQVAKALDWEQTPSYSLKLRATDSGQPPLHA 3412


>gi|13929168|ref|NP_114007.1| protocadherin Fat 1 precursor [Rattus norvegicus]
 gi|4426629|gb|AAD20459.1| protocadherin [Rattus norvegicus]
          Length = 4589

 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 43/156 (27%), Positives = 79/156 (50%), Gaps = 11/156 (7%)

Query: 33   VSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYW---LSNDYGERF 89
            +SK   SL  + F ++ +S + +E+ PV +++  ++   P    +  W   +  +Y   F
Sbjct: 1347 ISKPKPSLEPISFEESVFSFTVMESDPVAHMIGVISVEPPG---MPLWFDIIGGNYDSHF 1403

Query: 90   SISR-QGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYE 148
             + +  G I + + LD E + SY  TV ATD   T    V I V++ ND  P+F   +YE
Sbjct: 1404 DVDKGTGTIIVAKPLDAEQKSSYNLTVEATDGTSTILTQVLIKVIDTNDHRPQFSTSKYE 1463

Query: 149  LFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR 184
            + +P     D  P + I ++ A D D+ +++  +L+
Sbjct: 1464 VSVPE----DTEPETEILQISAVDRDEKNKLIYTLQ 1495



 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 62/218 (28%), Positives = 103/218 (47%), Gaps = 20/218 (9%)

Query: 29   ATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDL----RVKYWLSND 84
            A + V+  G +L    F +NEY V   EN P++ +++ V     RD      + Y L ND
Sbjct: 2477 ARVNVTVMGGNLHSPVFHQNEYEVELAENAPLHTLVVQVKATD-RDSGIYGHLTYHLVND 2535

Query: 85   YG-ERFSISRQGDISLMQCLDYE--TEDSYRFTVYATDTLMTTS-ATVNISVVNVNDWDP 140
            +  +RF ++  G +  ++ LD E   E      + A D     +  TVN+ + + ND  P
Sbjct: 2536 FAKDRFYVNDGGQVFTLERLDREAPAEKVISVRLMAKDAGGKVAFCTVNVILTDDNDNAP 2595

Query: 141  RFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDR--VTLSLRGPYEKM---FSIND 195
            +FR  +YE+ +     +    G+ + KV A+D D+G    VT ++    E +     IN 
Sbjct: 2596 QFRSTKYEVNVG----SSAAKGTSVVKVFASDADEGSNADVTYAIEADSESVEENLEINQ 2651

Query: 196  -SGHISIVD-LSALNTSTIQLVVVATDTGNPPRQASVP 231
             +G I+  + L  L        V A D G+PP+++ VP
Sbjct: 2652 LTGLITTKESLIGLENEFFTFFVRAVDNGSPPKESVVP 2689



 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 62/244 (25%), Positives = 116/244 (47%), Gaps = 19/244 (7%)

Query: 2    INEDDFLQPITLVVRAIQYDNQDRYALA-TLIVSKAGTSLREL--QFSKNEYSVSALENL 58
            + E D  +  +  ++ +  D+ ++  L+ T IV    T + +   +F+   Y  +  E+ 
Sbjct: 2873 LKELDHEERASYQIKVVASDHGEKVQLSSTAIVDVTVTDVNDSPPRFTAEIYKGTVSEDD 2932

Query: 59   PVNYVLLTVTT----NKPRDLRVKYWLSN-DYGERFSISR-QGD--ISLMQCLDYETEDS 110
            P   V+  ++T    ++  + +V Y+++  D   +F++   Q D  + + + LD E +DS
Sbjct: 2933 PPGGVIAILSTTDADSEEINRQVSYFITGGDALGQFAVENMQNDWRVYVKKPLDREQKDS 2992

Query: 111  YRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEA 170
            Y  TV ATD   ++ A V + V++ ND  P      Y   +P     D  PG ++ +V A
Sbjct: 2993 YLLTVTATDGTFSSKARVEVKVLDANDNSPVCERTAYSDAIPE----DALPGKLVMQVSA 3048

Query: 171  ADGD--KGDRVTLSLRGPYEKMFSIN-DSGHI-SIVDLSALNTSTIQLVVVATDTGNPPR 226
             D D      +T +L G   + F +N D+G + ++  L     +   L+V ATD G    
Sbjct: 3049 TDADIRSNAEITYTLFGSGAEKFKLNPDTGELRTLALLDREEQAVYHLLVKATDGGGRSC 3108

Query: 227  QASV 230
            QA++
Sbjct: 3109 QATI 3112



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 61/198 (30%), Positives = 96/198 (48%), Gaps = 27/198 (13%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSN-DYGERFSIS-RQGDISLMQC 102
            F K  YS    EN+  +  ++ V  N P  L+V Y +++ D   +F+I+   G I+++  
Sbjct: 2183 FEKAFYSAEIPENVQTHSPVVHVQANSPEGLKVFYSITDGDPFSQFTINFNTGVINVIAP 2242

Query: 103  LDYETEDSYRFTVYATDTLMTTSATVNISVV--NVNDWDPRFRYPQYELFLPHIPLADLT 160
            LD+E+  +Y+ ++ ATD+L    A V + +V  ++ND  P F    Y           L+
Sbjct: 2243 LDFESHPAYKLSIRATDSLTGAHAEVFVDIVVEDINDNPPVFVQQSYS--------TTLS 2294

Query: 161  PGSVIG----KVEAADGDK--GDRVTLSLRGPYEK---MFSIND-SGHISIVDLSALNTS 210
              SVIG    +V A D D      ++  L G + K    F I+  +G IS+V   AL+  
Sbjct: 2295 EASVIGAPILQVRATDSDSEPNRGISYQLIGNHSKSHDHFHIDSHTGLISLV--RALDYE 2352

Query: 211  TIQ---LVVVATDTGNPP 225
              Q   L+V A D G PP
Sbjct: 2353 QFQQHKLLVRAVDGGMPP 2370



 Score = 55.8 bits (133), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 62/213 (29%), Positives = 95/213 (44%), Gaps = 17/213 (7%)

Query: 27   ALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLS---- 82
            A  T++VS    +     F   EY  +  E++ +   +L V     RD+     ++    
Sbjct: 3213 ATGTVVVSVLDINDNPPVFEYREYGATVSEDIVIGTEVLQVYAAS-RDIEANAEITYAII 3271

Query: 83   --NDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVN 136
              N++G +FSI S+ G I +++ LDYE+   Y  TV ATD     ++  ATVNI++ ++N
Sbjct: 3272 SGNEHG-KFSIDSKTGAIFIIENLDYESSHGYYLTVEATDGGTPSLSDVATVNINITDIN 3330

Query: 137  DWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS-LRGPYEKMFSIND 195
            D  P F    Y   +     A L    +    + ADG     +  S + G     F+I+ 
Sbjct: 3331 DNSPVFSQDSYTTVVSED--AALEQPVITIMADDADGPSNSHILYSIIEGNQGSPFTIDP 3388

Query: 196  -SGHISIVD-LSALNTSTIQLVVVATDTGNPPR 226
              G I +   L     S   L V A D GNPPR
Sbjct: 3389 VRGEIKVTKPLDRETISGYTLTVQAADNGNPPR 3421



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 68/245 (27%), Positives = 114/245 (46%), Gaps = 42/245 (17%)

Query: 4    EDDFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNY- 62
            E++F    T  VRA+   +  + ++  + V      ++  +FS+  Y+ S  E++P+   
Sbjct: 2666 ENEFF---TFFVRAVDNGSPPKESVVPVYVKILPPEVQLPRFSEPFYTYSISEDMPIGTE 2722

Query: 63   -----------VLLT-VTTNKPRDLRVKYWLSNDYGERFSISRQ-GDISLMQCLDYETED 109
                       VL T V  N P   R ++         F I RQ G + L + LD+ET  
Sbjct: 2723 IDLIRVEHSGTVLYTLVKGNTPESNRDEF---------FVIDRQSGRLKLEKSLDHETTK 2773

Query: 110  SYRFTVYATDTL----MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVI 165
             Y+F++ A  TL    +  S  V+I V + ND  P      YE F+    + +L  GS +
Sbjct: 2774 WYQFSILARCTLDDYEVVASIDVSIQVKDANDNSPVLESNPYEAFI----VENLPAGSRV 2829

Query: 166  GKVEAADGDKG--DRVTLSLRGPYE----KMFSIN-DSGHISIV-DLSALNTSTIQLVVV 217
             +V A+D D G   +V  SL    +    + F+IN ++G I+ + +L     ++ Q+ VV
Sbjct: 2830 IQVRASDLDSGVNGQVMYSLDQSQDADIIESFAINMETGWITTLKELDHEERASYQIKVV 2889

Query: 218  ATDTG 222
            A+D G
Sbjct: 2890 ASDHG 2894



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 61/226 (26%), Positives = 107/226 (47%), Gaps = 21/226 (9%)

Query: 13   LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENL----PVNYVLLTVT 68
            L+V+A   D   R   AT++++    +    +F+ + Y+++  EN     P+  V  T  
Sbjct: 3096 LLVKAT--DGGGRSCQATIVLTLEDVNDNTPEFTADPYAITVFENTEPGTPLTRVQAT-D 3152

Query: 69   TNKPRDLRVKYWLSNDYGERFSISRQ-GDISLMQCLDYETEDSYRFTVYATDT----LMT 123
             +   + ++ Y L +    +FSI+ Q G + L + LD E +  Y  T+ A D      +T
Sbjct: 3153 ADAGLNRKISYSLLDSADGQFSINEQSGILQLEKHLDRELQAVYTLTLKAADQGLPRKLT 3212

Query: 124  TSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS- 182
             + TV +SV+++ND  P F Y +Y   +      D+  G+ + +V AA  D      ++ 
Sbjct: 3213 ATGTVVVSVLDINDNPPVFEYREYGATVSE----DIVIGTEVLQVYAASRDIEANAEITY 3268

Query: 183  --LRGPYEKMFSIND-SGHISIVD-LSALNTSTIQLVVVATDTGNP 224
              + G     FSI+  +G I I++ L   ++    L V ATD G P
Sbjct: 3269 AIISGNEHGKFSIDSKTGAIFIIENLDYESSHGYYLTVEATDGGTP 3314



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 56/195 (28%), Positives = 89/195 (45%), Gaps = 20/195 (10%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTTNKPRDL----RVKYWLSNDYGERFSISR-QGDIS 98
            +F +  Y V   E+  +N  ++ V     +DL     V Y +  D  E+F+I R  G + 
Sbjct: 822  EFLQESYFVEVSEDKEINSEIIQVEATD-KDLGPSGHVTYAILTDT-EKFAIDRVTGVVK 879

Query: 99   LMQCLDYETEDSYRFTVYATDT-----LMTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
            ++Q LD E +  +   + A D       ++++  + +S+ +VND  PRF  P Y + +  
Sbjct: 880  IIQPLDREVQRVHYLKIEARDQATEEPWLSSTVLLKVSLDDVNDNPPRFIPPSYSVKV-- 937

Query: 154  IPLADLTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSIND-SGHISIV-DLSALNT 209
                DL  G++I  +EA D D G   +V  SL    E  F ++  SG + IV  L     
Sbjct: 938  --REDLPEGTIIMWLEAHDPDVGQSSQVRYSLLDHGEGHFDVDKLSGAVRIVQQLDFEKK 995

Query: 210  STIQLVVVATDTGNP 224
                L V A D G P
Sbjct: 996  QLYNLTVRAKDKGKP 1010



 Score = 43.9 bits (102), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 56/191 (29%), Positives = 86/191 (45%), Gaps = 30/191 (15%)

Query: 56   ENLPVNYVLLTVTTNKP---RDLRVKYWLSNDYG-ERFSISRQ-GDISLMQCLDYETEDS 110
            E++P+   ++TV+ +     RD  ++Y + +  G   F I  + G I     LD E+   
Sbjct: 1046 EDVPMGSSVMTVSAHDEDTGRDGEIRYSIRDGSGVGVFRIDEETGVIETSDRLDRESTSH 1105

Query: 111  YRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSV-IG 166
            Y  TVYATD     +++   V I V +VND  P+   P   ++ P I   + +P  V + 
Sbjct: 1106 YWLTVYATDQGVVPLSSFIEVYIEVEDVNDNAPQTSEP---VYYPEI--MENSPKDVSVV 1160

Query: 167  KVEAADGDKGDRVTLSLRGPYEKMFSINDSGHISIVDLSALNTSTIQ-----------LV 215
            ++EA D D      L+ R     + S N  G  SI   + L T+T +           L 
Sbjct: 1161 QIEAFDPDSSSSDKLTYR-----ITSGNPQGFFSIHPKTGLITTTSRKLDREQQDEHILE 1215

Query: 216  VVATDTGNPPR 226
            V  TD G PPR
Sbjct: 1216 VTVTDNGVPPR 1226



 Score = 41.6 bits (96), Expect = 0.61,   Method: Compositional matrix adjust.
 Identities = 59/215 (27%), Positives = 88/215 (40%), Gaps = 19/215 (8%)

Query: 24  DRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLR---VKYW 80
           DR A   ++V   GT+    +F++  Y  S  EN PV   ++ V+   P +     V Y 
Sbjct: 443 DRRASTKVVVKVVGTNSNPPEFTQTSYKASFDENAPVGTPVMRVSAVDPDEGENGYVTYS 502

Query: 81  LSNDYGERFSISR-QGDISLMQCLDYE-TEDSYRFTVYATDTLMTTSATVN----ISVVN 134
           ++N     F I    G +S  + LDYE     Y   + A+D  +     V     I++ N
Sbjct: 503 IANLNHVPFVIDHFTGAVSTSENLDYELMPRVYTLRIRASDWGLPYRREVEVLATITLNN 562

Query: 135 VNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYE-KMFSI 193
           +ND  P F     E  +P     DL  G  I  V A D D+   V   +    E  +F +
Sbjct: 563 LNDNTPLFEKTNCEGTIPR----DLGVGEQITTVSAIDADELQLVRYQIEAGNELDLFGL 618

Query: 194 NDSGHI-----SIVDLSALNTSTIQLVVVATDTGN 223
           N S  +     S++D      S   L + ATD  N
Sbjct: 619 NPSSGVLSLKHSLMDGLGAKVSFHSLRITATDGEN 653



 Score = 39.7 bits (91), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 49/197 (24%), Positives = 85/197 (43%), Gaps = 18/197 (9%)

Query: 12   TLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNY-VLLTVTTN 70
            TL V+A    N  R    T+ +  +  +     FS++ YSV   EN PV + VL  V T+
Sbjct: 3408 TLTVQAADNGNPPRVNTTTVNIDVSDVNDNAPLFSRDNYSVIIQENKPVGFSVLKLVVTD 3467

Query: 71   K-------PRDLRVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDT--- 120
            K       P    +   +S +    F +++ G +     +  + +D Y   V   D    
Sbjct: 3468 KDSSHNGPPFSFAI---VSGNDDNMFEVNQHGVLLTAATVKRKVKDHYLLHVKVADNGKP 3524

Query: 121  LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVT 180
             +++   ++I V+  +   P       E+F+      +   G VIGK+ A D D  D +T
Sbjct: 3525 QLSSLTHIDIRVIEESIHPPAIL--PLEIFI--TASGEEYSGGVIGKIHATDQDVYDTLT 3580

Query: 181  LSLRGPYEKMFSINDSG 197
             SL    + +FS++ +G
Sbjct: 3581 YSLDPHMDGLFSVSSTG 3597



 Score = 38.1 bits (87), Expect = 6.6,   Method: Compositional matrix adjust.
 Identities = 41/156 (26%), Positives = 70/156 (44%), Gaps = 14/156 (8%)

Query: 76   RVKYWL--SNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVV 133
            R++Y +   ND+         G I+L     +  +  Y   V  +D +  +SA VN++V+
Sbjct: 2425 RLEYSILSGNDHKSFVIDGETGIITLSNPRRHTLKPFYSLNVSVSDGVFRSSARVNVTVM 2484

Query: 134  NVNDWDPRFRYPQYELFLPHIPLADLTP-GSVIGKVEAADGDKG--DRVTLSLRGPYEK- 189
              N   P F   +YE     + LA+  P  +++ +V+A D D G    +T  L   + K 
Sbjct: 2485 GGNLHSPVFHQNEYE-----VELAENAPLHTLVVQVKATDRDSGIYGHLTYHLVNDFAKD 2539

Query: 190  MFSINDSGHI---SIVDLSALNTSTIQLVVVATDTG 222
             F +ND G +     +D  A     I + ++A D G
Sbjct: 2540 RFYVNDGGQVFTLERLDREAPAEKVISVRLMAKDAG 2575


>gi|357615419|gb|EHJ69645.1| hypothetical protein KGM_02586 [Danaus plexippus]
          Length = 1773

 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 47/150 (31%), Positives = 72/150 (48%), Gaps = 13/150 (8%)

Query: 95   GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFL 151
            G++ +   +DYE   S  FT+ A D+    +++SA V + VVN+ND  P F    Y   +
Sbjct: 912  GEVRVASRIDYEATPSLNFTLVAYDSGVPQLSSSAAVFVEVVNINDERPEFSADLYNATV 971

Query: 152  PHIPLADLTPGSVIGKVEAADGDKG---DRVTLSLRGPYEKMFSINDSGHISI---VDLS 205
                    TPG+ +  V A D D G    ++T SL G    +F+I+  G I++    D+ 
Sbjct: 972  EE----HSTPGTSVLNVSAVDLDAGGDFGKITYSLSGESASLFTISQEGEITVAEGADID 1027

Query: 206  ALNTSTIQLVVVATDTGNPPRQASVPAIMH 235
               TS +   VVATD   P  + S    +H
Sbjct: 1028 RETTSELWFRVVATDNAPPQTKKSSSVPVH 1057



 Score = 43.1 bits (100), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 48/185 (25%), Positives = 83/185 (44%), Gaps = 26/185 (14%)

Query: 44  QFSKNEYSVSALENL----PVNYVLLTVT-----TNKPRDLRVKYWLSNDYGERFSISRQ 94
           +F++ EYSV  LE+L    P+ ++ + VT      N    LR+   L     E    +  
Sbjct: 309 RFNRREYSVELLESLARGTPLPHLDMVVTDTDLGMNSVFSLRLADNLGAFVVEPSVATGS 368

Query: 95  GDISLM--QCLDYETEDSYRFTVYA------TDTLMTTSATVNISVVNVNDWDPRFRYPQ 146
             ++L     LDYE  +  +F +        T   +++ A+V +SV +VND  P F    
Sbjct: 369 ATVTLRLNSTLDYEDPNQRKFILEVIAEEVHTSPALSSKASVTVSVKDVNDNSPEFADDS 428

Query: 147 YELFLPHIPLADLTPGSVIGKVEAADGDKG----DRVTLSLRGPYEKMFSIN-DSGHISI 201
           Y   +      D  PG+ +  ++A D D G    + +   L G   ++FS+   SG IS+
Sbjct: 429 YSAGVRE----DAAPGTRLAAIKATDRDTGRFGTEGIVYQLSGNGAELFSVEPRSGVISV 484

Query: 202 VDLSA 206
            + ++
Sbjct: 485 AECAS 489



 Score = 42.7 bits (99), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 40/148 (27%), Positives = 61/148 (41%), Gaps = 32/148 (21%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTT-NKPRDLRVKYW---LSNDYGERFSISR-QGDISL 99
            F    Y  S  ENLP   ++ TV   +K R    K +   L  +    F++ R QG I  
Sbjct: 1286 FLHRHYHFSVTENLPSGVIVGTVKAIDKDRGDNGKVYYHILEGNQDGAFTLDRTQGIIRA 1345

Query: 100  MQCLDYETEDSYRFTVYATDTLMTTSA-------------------TVNISVVNVNDWDP 140
                D E +D Y  TVYA++  +   A                   T+ I V++ ND +P
Sbjct: 1346 SMSFDREKQDEYSMTVYASNNPILEHAAAILNSIDNSTESQDVSVTTIKIRVLDENDNEP 1405

Query: 141  RFRYPQYELFLPHIPLADLTPGSVIGKV 168
            +F    Y         A ++PG+ +G+V
Sbjct: 1406 KFEQKVY--------YAGVSPGARVGEV 1425



 Score = 42.0 bits (97), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 39/124 (31%), Positives = 63/124 (50%), Gaps = 11/124 (8%)

Query: 111  YRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEA 170
            Y+  V A+D     +A V+I+V++VN   P F  P  ++    IP      G +I  ++A
Sbjct: 1141 YQLVVAASDGSHRDTARVDITVLSVNKHSPVFVQPPPDVRRIEIPAHAAQAGYLITTIQA 1200

Query: 171  ADGDKGD--RVTLSLR------GPYEKMFSIND-SGHISI-VDLSALNTSTIQLVVVATD 220
             D D G+  RVT  L+      G  E+ FS++  +G ++  V L   + +  QL+V A+D
Sbjct: 1201 TDEDPGENGRVTYHLKVDNQNVGHTEE-FSLDPVTGQLTTRVPLDIDSQAEYQLIVSASD 1259

Query: 221  TGNP 224
             G P
Sbjct: 1260 GGTP 1263



 Score = 40.8 bits (94), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 42/156 (26%), Positives = 78/156 (50%), Gaps = 14/156 (8%)

Query: 76   RVKYWLSNDYGERFSISRQGDISLMQC--LDYETEDSYRFTVYATD-----TLMTTSATV 128
            ++ Y LS +    F+IS++G+I++ +   +D ET     F V ATD     T  ++S  V
Sbjct: 997  KITYSLSGESASLFTISQEGEITVAEGADIDRETTSELWFRVVATDNAPPQTKKSSSVPV 1056

Query: 129  NISVVNVNDWDPRFRYPQYELFL-PHIPLADLTPGSVIGKVEAADGDKGD--RVTLSLRG 185
            ++ + ++ND  P F    Y+  +  ++P   L+P   + ++ A D D+G+   VT S+  
Sbjct: 1057 HVIITDINDNPPVFSQRVYKGSVSENVP---LSPPPALLQLRAEDLDQGEYGTVTYSIED 1113

Query: 186  PYE-KMFSINDSGHISIVDLSALNTSTIQLVVVATD 220
              +  +F ++    I       +  +  QLVV A+D
Sbjct: 1114 QSQPGVFRVDPQTGILSPVRPVVGGALYQLVVAASD 1149



 Score = 38.9 bits (89), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 41/82 (50%), Gaps = 5/82 (6%)

Query: 95  GDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHI 154
           G + L + LDY  +  Y+F ++ATD  + +S+ V + VV+V +  P F        LP  
Sbjct: 150 GALVLKRSLDYNEKQFYQFQLHATDGTLNSSSPVEVKVVDVQNTPPVFSG-ALSAALPE- 207

Query: 155 PLADLTPGSVIGKVEAADGDKG 176
              D   GS+   + A DGD+ 
Sbjct: 208 ---DAPVGSLALVIRAKDGDRA 226


>gi|334331485|ref|XP_003341492.1| PREDICTED: protocadherin-7 isoform 2 [Monodelphis domestica]
          Length = 1073

 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 57/182 (31%), Positives = 83/182 (45%), Gaps = 13/182 (7%)

Query: 57  NLPVNYVLLTVTTNKP--RDLRVKYWLSNDYGERFSIS-RQGDISLMQCLDYETEDSYRF 113
           N+P   V   V T+    ++  + Y L +     F+I    GDI +   LD E  D Y F
Sbjct: 552 NIPGERVATVVATDADSGKNAEIAYSLDSAVVGIFAIDPDSGDILVNTVLDREQNDRYEF 611

Query: 114 TVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEA 170
            V A D    ++  S TV + V + ND DP+F    +  ++      +L P S +G V  
Sbjct: 612 KVTAKDKGIPILQGSTTVIVQVADKNDNDPKFMQDVFTFYVKE----NLQPNSPVGMVTV 667

Query: 171 ADGDKGDRVTLSLRGPYE-KMFSI-NDSGHI-SIVDLSALNTSTIQLVVVATDTGNPPRQ 227
            D DKG    +SL    +  +FSI ND+G I S         ++    V A D G+PPR 
Sbjct: 668 MDADKGRNAEMSLYIEEDSSIFSIENDTGTIYSTTAFDRELQTSYTFKVKAVDGGDPPRS 727

Query: 228 AS 229
           A+
Sbjct: 728 AT 729



 Score = 51.6 bits (122), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 82/317 (25%), Positives = 138/317 (43%), Gaps = 48/317 (15%)

Query: 30  TLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVT---TNKPRDLRVKYWLSNDYG 86
           T+IV  A  +  + +F ++ ++    ENL  N  +  VT    +K R+  +  ++  D  
Sbjct: 628 TVIVQVADKNDNDPKFMQDVFTFYVKENLQPNSPVGMVTVMDADKGRNAEMSLYIEED-S 686

Query: 87  ERFSISRQ-GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRF 142
             FSI    G I      D E + SY F V A D      + +ATV++ V++ ND  P  
Sbjct: 687 SIFSIENDTGTIYSTTAFDRELQTSYTFKVKAVDGGDPPRSATATVSLFVMDENDNAPTV 746

Query: 143 RYPQ---YELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTL--SLRG--PYEKMFSIN- 194
            YP    Y L  P   +      +V+  V A D D G    L  S+ G  P+ K+F I+ 
Sbjct: 747 TYPSNISYTLLPPSSNVR-----TVVATVLATDSDTGVNADLNYSIVGGNPF-KLFEIDA 800

Query: 195 DSGHISIV-DLSALNTSTIQLVVVATDTGNPPRQASVPAIMHFPEA------IVQQASSK 247
            SG +S+V  L+  +    +LVV   D+G P +  +    +   E+      I  Q +  
Sbjct: 801 TSGVVSLVGKLAQKHYGLHRLVVQVNDSGQPSQSTTTLVHVFVNESVSNATVIDSQITRS 860

Query: 248 LNSGTSSTVL-------------IILGVVLIVLGFVIILLILYIHKNKHTKN-NGPPGSS 293
           L++  +  +              I++GVV  ++  ++I+LI+ + +   +KN NG     
Sbjct: 861 LHTPLTQDIAGDPSYEISKQRLSIVIGVVAGIMTVILIILIVVMARYCRSKNKNGYEAGK 920

Query: 294 HSKNDSFLSNVILPEKH 310
               D F      P++H
Sbjct: 921 KDHEDFF-----TPQQH 932



 Score = 43.1 bits (100), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 41/162 (25%), Positives = 69/162 (42%), Gaps = 30/162 (18%)

Query: 93  RQGDISLMQCLDYETEDSYRFTVY---ATDTLMTTSATVNISVVNVNDWDPRFRYPQYEL 149
           +Q  + +   LD E  DSY  T+      D   ++ A + + + +VND  PRF    YE 
Sbjct: 260 KQPQLIVKGALDREQRDSYELTLRVRDGGDPPRSSQAILRVLITDVNDNSPRFEKSVYEA 319

Query: 150 FLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSI------------NDSG 197
            L      + TPG+ I ++ AAD D G      + G  E +F                +G
Sbjct: 320 DLAE----NSTPGTPILQLRAADLDVG------VNGQIEYVFGAATENVRRLLRLDETTG 369

Query: 198 HISI---VDLSALNTSTIQLVVVATDTGNPPRQASVPAIMHF 236
            +S+   +D   +N   ++  V+A D G PP+      +++ 
Sbjct: 370 WLSVLHRIDREEVN--QLRFTVMARDRGQPPKTDKATVVLNI 409


>gi|403256586|ref|XP_003920950.1| PREDICTED: protocadherin gamma-A2 [Saimiri boliviensis boliviensis]
          Length = 693

 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 58/193 (30%), Positives = 90/193 (46%), Gaps = 17/193 (8%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVT---TNKPRDLRVKYWLSNDYG---ERFSI-SRQGDI 97
           F++ EY VS  EN PV+ ++LTVT    ++  + +V Y+L    G   E F + S  GD+
Sbjct: 242 FTQPEYRVSVPENTPVDTLILTVTATDADEGYNAQVAYFLEKSLGGTSEVFELKSTSGDL 301

Query: 98  SLMQCLDYETEDSYRFTVYATDTL-MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
            +++ LDYE   S+   + A D   + T   V ++V++VND  P F    Y         
Sbjct: 302 RIIKVLDYEEATSHEIDIEAQDGPGLLTRTKVIVTVLDVNDNAPEF----YITSASSSVS 357

Query: 157 ADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDS--GHISIVDLSALNT---ST 211
            D  PG++IG     D D G    ++   P    F +  S   +  +V   AL+    S 
Sbjct: 358 EDSPPGTIIGLFNVYDRDSGQNAFITCSLPDNLPFKLEKSVDNYYRLVTTKALDREQFSF 417

Query: 212 IQLVVVATDTGNP 224
             + + A D GNP
Sbjct: 418 YNITLTAKDEGNP 430



 Score = 38.9 bits (89), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 40/143 (27%), Positives = 64/143 (44%), Gaps = 17/143 (11%)

Query: 101 QCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLA 157
           + LD E    Y  T+ A D     ++T A + + V ++ND  P F    Y  ++P     
Sbjct: 408 KALDREQFSFYNITLTAKDEGNPSLSTDAHILLQVADINDNAPAFSRTSYSAYIPE---- 463

Query: 158 DLTPGSVIGKVEAADGDKGD--RVTLSLR------GPYEKMFSIN-DSGHI-SIVDLSAL 207
           +   G+ I  V A D D  +   VT S         P     S+N D+G + ++      
Sbjct: 464 NNPRGASIFSVTAHDPDSNNNAHVTYSFMEDTIQGAPLSSYISMNSDTGVLYALRSFDYE 523

Query: 208 NTSTIQLVVVATDTGNPPRQASV 230
           +   +QL V+A D+GNPP  ++V
Sbjct: 524 HFRDLQLWVIARDSGNPPLSSNV 546


>gi|312073442|ref|XP_003139522.1| hypothetical protein LOAG_03937 [Loa loa]
          Length = 1277

 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 63/213 (29%), Positives = 102/213 (47%), Gaps = 21/213 (9%)

Query: 56  ENLPVNYVLLTVTTNKPRDLRVKYWLS--NDYGERFSISRQGDISLMQCLDYETEDSYRF 113
           E  P+N +++T+  +  +  R+ Y +S  N+  +   IS  G +  M   D E    Y  
Sbjct: 297 EATPLNSIIITLGNDSTKG-RMYYMISGGNEDNKFAIISEIGTLITMNSFDREETSVYNL 355

Query: 114 TVYATDTLMTTS------ATVNISVVNVNDWDPRFRYPQ-YELFLPHIPLADLTPGSVIG 166
            V   +T  + S        V +++ ++ND  P F  PQ   L +      +LTP   +G
Sbjct: 356 QV---ETRSSNSDEHLYWTIVQVAIADINDNAPIFTDPQPVRLRIKISDELNLTPNMYVG 412

Query: 167 KVEAADGDKGD--RVTLSLRGPYEKMFSINDSGHISI--VDLSALNTSTIQLVVVATDTG 222
           +V   D D G+  RV L +  P +K+FSINDSG + +  V LS  +    ++ V+A D G
Sbjct: 413 QVNVEDPDDGNNGRVRLRIVPPMDKLFSINDSGAVMVNGVLLSG-HFGEHRMTVIAADHG 471

Query: 223 NPPRQASVPAIMHFPEAIVQQASSKLNSGTSST 255
           +PP +  V  I++  + +    S  LNS   ST
Sbjct: 472 DPPLETRVNLIINIEDTL---QSVSLNSNQLST 501



 Score = 48.9 bits (115), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 55/176 (31%), Positives = 81/176 (46%), Gaps = 12/176 (6%)

Query: 36  AGTSLRELQFSKNEYSVSALENLPVNYVLLTV-TTNK--PRDLRVKYWLSNDYGERFSIS 92
           A +S  +LQFSK  YS+S  E++   Y+LL +   NK   R   +    S +YG  FSIS
Sbjct: 783 AISSSNKLQFSKRNYSISVSESVRSPYLLLVLPVVNKLANRHSIICSITSGNYGGAFSIS 842

Query: 93  ----RQGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRY--PQ 146
                   +     LD ET D Y+  V          A V+I+V++ ND  P+F Y   +
Sbjct: 843 TGPESNCKLRTQTLLDRETVDYYQLNVSVKMEQQVDHAIVHITVLDTNDNAPKFIYNNDE 902

Query: 147 YELFLPHIPLADLTPGSV-IGKVEAADGDKGDRVTLSLRGPY--EKMFSINDSGHI 199
           Y  +   +    L+   V   +VE AD +    VT SL       K F ++ +G+I
Sbjct: 903 YGGYFAALSTDALSFTLVTTTQVEDADLENNSVVTYSLNSFSMDSKYFMVDSTGNI 958


>gi|348582920|ref|XP_003477224.1| PREDICTED: protocadherin gamma-A5-like [Cavia porcellus]
          Length = 814

 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 59/194 (30%), Positives = 88/194 (45%), Gaps = 17/194 (8%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWLSND---YGERFSI-SRQGDI 97
           F+++EY VS  EN+PV   LLT+T +   +    +V Y+  N+     + F + S  G+I
Sbjct: 242 FTQSEYRVSVPENIPVGTRLLTLTASDADEGINGKVTYFFRNEEDIISKTFQLDSNLGEI 301

Query: 98  SLMQCLDYETEDSYRFTVYATD-TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
           S MQ LDYE    Y   V A D   +  SA V ++V +VND  P          +     
Sbjct: 302 STMQSLDYEESRFYLMEVVAQDGGALLASAKVLVTVQDVNDNAPEVVLASLSSSVSE--- 358

Query: 157 ADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDS--GHISIVDLSALN---TST 211
            D  PG++I      D D G    ++   P    F +  S   +  ++   AL+   TS 
Sbjct: 359 -DCLPGTIIVLFSVHDSDSGKNGEIACSIPKSLPFKLEKSVDNYYHLLTTRALDREETSD 417

Query: 212 IQLVVVATDTGNPP 225
             + V  TD+G PP
Sbjct: 418 YNITVTVTDSGTPP 431



 Score = 43.5 bits (101), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 57/217 (26%), Positives = 92/217 (42%), Gaps = 35/217 (16%)

Query: 92  SRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYE 148
           S  G +  +Q  DYE        V A D+    ++T+ ++N+ V++ ND  P   YP   
Sbjct: 509 SDTGVLYALQSFDYEQLRDLHLLVTARDSGNPPLSTNVSLNLFVLDQNDNTPEILYPT-- 566

Query: 149 LFLP-------HIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-DSG 197
             LP        +      PG ++ KV A D D G    LS   L+     +FS+   +G
Sbjct: 567 --LPTDGSTGVELTPRSAEPGYLVTKVVAVDKDSGQNAWLSYHLLKASEPGLFSVGLHTG 624

Query: 198 HI----SIVDLSALNTSTIQLVVVATDTGNPPRQASVPAIM----HFPEAIVQQASSK-- 247
            +    +++D   L  S   LVV   D G PP  A+V   +      P+ +    S +  
Sbjct: 625 EVRTARALLDKDTLKQS---LVVAVQDHGQPPLSATVTLTVAVANSIPDVLADLGSIRTP 681

Query: 248 LNSGTSSTVLIILGVV----LIVLGFVIILLILYIHK 280
           ++   S   L ++  V     + L FVI+LL L + +
Sbjct: 682 VDPEDSDLTLYLVVAVAAVSCVFLAFVIVLLALRVRR 718


>gi|334350360|ref|XP_001374577.2| PREDICTED: protocadherin-11 X-linked [Monodelphis domestica]
          Length = 1256

 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 52/203 (25%), Positives = 95/203 (46%), Gaps = 28/203 (13%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGERFSI-SRQGDISLM 100
           F++  + +S  EN  +   L  ++    +  ++  + Y ++N+    FS+ +R G +S +
Sbjct: 453 FTQPTFGISVPENNALGAQLTKISATDKDSGKNGEITYLIANEGPYPFSLDNRTGVLSAV 512

Query: 101 QCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLA 157
           + LD ET+D Y FTV A D     + ++ATV ++V++ ND  P F + +Y  ++P     
Sbjct: 513 EQLDRETKDKYTFTVTARDNGEPHLQSNATVTVTVLDQNDNSPTFTHSEYNFYVPE---- 568

Query: 158 DLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSGHISI----------VDLSAL 207
           +L     +G +   D D GD   ++L         +N++G   I          +     
Sbjct: 569 NLPKHGTVGLITITDPDTGDNGVITLT-------ILNNNGSFIIDAVNGVIRPNISFDRE 621

Query: 208 NTSTIQLVVVATDTGNPPRQASV 230
              +   VVVATD G  PR ++ 
Sbjct: 622 KQESYTFVVVATDGGRVPRSSTA 644



 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 54/191 (28%), Positives = 88/191 (46%), Gaps = 12/191 (6%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPR---DLRVKYWLSNDYGERFSISRQGDISLMQ 101
           F+ +EY+    ENLP +  +  +T   P    +  +   + N+ G     +  G I    
Sbjct: 557 FTHSEYNFYVPENLPKHGTVGLITITDPDTGDNGVITLTILNNNGSFIIDAVNGVIRPNI 616

Query: 102 CLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLAD 158
             D E ++SY F V ATD      +++A V I+VV++ND  P F  P        IPLA 
Sbjct: 617 SFDREKQESYTFVVVATDGGRVPRSSTARVTINVVDINDNKPVFVVPPSNYTFEFIPLAT 676

Query: 159 LTPGSVIGKVEAADGDKGDRVTLSLR---GPYEKMFSI-NDSGHISI-VDLSALNTSTIQ 213
              G+++  V A D D G    +  +   G  +K+F +   SG+I++       +T   +
Sbjct: 677 EI-GTLLYVVMAVDEDTGMNSEIRYQIEDGNKKKLFEMEGSSGNITLKSKFIPADTGLHK 735

Query: 214 LVVVATDTGNP 224
           L++ A D G P
Sbjct: 736 LLIKARDLGQP 746



 Score = 42.7 bits (99), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 38/143 (26%), Positives = 71/143 (49%), Gaps = 15/143 (10%)

Query: 99  LMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIP 155
           + + LD E  D+Y   +   D      +++A + +SV+++ND  P F+  + E+ +P   
Sbjct: 190 VQKMLDREERDTYVMKLKVEDGGSPPRSSTAILQVSVIDMNDNRPIFKETEIEVTIPE-- 247

Query: 156 LADLTPGSVIGKVEAADGDKGDRVTLS------LRGPYEKMFSIND-SGHISIVD-LSAL 207
             +   GS + ++ A D D G    +       +    +K+FS+N+ +G I+I + L   
Sbjct: 248 --NAPVGSSVYQLHATDADVGANARIQYFFSSLMSNVAKKLFSLNNTTGLITIKEPLDRE 305

Query: 208 NTSTIQLVVVATDTGNPPRQASV 230
                +L++VATD G  P +A V
Sbjct: 306 QAPLHKLMIVATDGGPMPARAMV 328


>gi|301621404|ref|XP_002940045.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 4 [Xenopus
            (Silurana) tropicalis]
          Length = 5753

 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 65/267 (24%), Positives = 119/267 (44%), Gaps = 28/267 (10%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKP---RDLRVKYWLSNDYGERFSISRQGDISLM- 100
            F + +Y V   EN P    L  V  + P    + ++ + + N  G+ F +S    I+ M 
Sbjct: 4470 FDQTKYVVYIPENNPSGSSLFQVQASDPDLNENAKIIFSIVNKNGDDFPVSAYVSINSMT 4529

Query: 101  ------QCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYEL-- 149
                  +  DYE    +   V A D     + ++ATV I + ++ND  P+  YP   +  
Sbjct: 4530 GVLYAQRPFDYEQMREFNVQVMAKDNGSPPLNSTATVKICITDINDNSPKILYPSTGVDD 4589

Query: 150  --FLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR--GPYE-KMFSIN-DSGHISIVD 203
                  +P +    G ++ KV A D D G    LS +   P E   FSI   +G I  + 
Sbjct: 4590 STVFEIVPQSS-NKGDLVAKVVAVDADSGHNAWLSYQFLQPSEPSYFSIGRHTGEIRTLR 4648

Query: 204  -LSALNTSTIQLVVVATDTGNPPRQASVPAIM----HFPEAIVQQASSKLNSG-TSSTVL 257
                  T+  +++V+  D GNPPR +++   +    +F + I +  ++  NS  T+  + 
Sbjct: 4649 VFQEKETTKHKVIVLVKDNGNPPRSSTINLNLVVADNFQQDIPKMKNNYQNSDQTNLDIY 4708

Query: 258  IILGVVLIVLGFVIILLILYIHKNKHT 284
            +++ + LI   F + ++  +I K + +
Sbjct: 4709 LVIALALISFLFTLTVMFAFISKCRKS 4735



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 71/281 (25%), Positives = 122/281 (43%), Gaps = 37/281 (13%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPR---DLRVKYWLSNDYGERFSISRQGDISLM- 100
            F +  Y V   EN P    +  V  + P    + ++ Y + N   + F +S    I+ M 
Sbjct: 2054 FGQASYVVYIPENNPSGSSVFQVQASDPDLDDNAKITYSIMNTNTDNFPVSSYISINSMT 2113

Query: 101  ------QCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYP------ 145
                  +  DYE    +   V A D     + ++ TV I + ++ND  P+  YP      
Sbjct: 2114 GILYAQRPFDYEQLREFGIQVMAKDNGSPPLNSTTTVTICITDLNDNSPKILYPSTSADD 2173

Query: 146  --QYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-DSGHI 199
              Q+E+    +P      G ++ KV A D D G    LS   L+      F+I+  +G I
Sbjct: 2174 SAQFEI----VPRTS-NKGELVAKVVAVDADSGHNAWLSYEFLQVSESMSFTISRHTGEI 2228

Query: 200  SIVDLSALNTSTIQ-LVVVATDTGNPPRQASVPAIM----HFPEAIVQQASSKLNSGTSS 254
              + +     +  Q LVV+  D G+PPR A++   +    +F + I Q  +   NS + S
Sbjct: 2229 RTLRVFPEKETLKQRLVVLVKDNGSPPRSATINLNLVVADNFQQDIPQMNNQLQNSDSQS 2288

Query: 255  TVLIILGVVLIVLGFVIILLILY--IHKNKHTKNNGPPGSS 293
             + I L + L ++ F+  L ++   I K + + ++   GSS
Sbjct: 2289 NLDIYLVIALALVSFLFTLTVMLAIISKCRKSAHSQTFGSS 2329



 Score = 55.8 bits (133), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 53/194 (27%), Positives = 93/194 (47%), Gaps = 17/194 (8%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSN---DYGERFSISRQ-GDI 97
            FSK  Y V+ +E  PVN +++ +     ++  + ++ Y LS+      E+F+I  Q G+I
Sbjct: 2649 FSKELYQVNLIETAPVNTLVVHLNATDEDEGVNGQITYSLSHITKAAQEKFTIDSQTGEI 2708

Query: 98   SLMQCLDYETEDSYRFTVYATD-TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
                 LD+E+  ++   V A D   + ++A V I +V+ ND  P          +P    
Sbjct: 2709 RTKGTLDFESIKAFEMIVEAQDGGGLFSNAKVVIHIVDANDNAPEIIITSVSNSIPE--- 2765

Query: 157  ADLTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSINDSGHISIVDLSALNTSTIQ- 213
             D +PG+VI  +   D D G+  +V   + GP     + + S +  ++  S L+   I  
Sbjct: 2766 -DSSPGTVIALINIRDIDSGENGKVYCEIIGPLPFEITSSSSNYFRLLTTSPLDREKIHR 2824

Query: 214  --LVVVATDTGNPP 225
              + + ATD G+PP
Sbjct: 2825 YNITIKATDKGSPP 2838



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 57/221 (25%), Positives = 96/221 (43%), Gaps = 36/221 (16%)

Query: 95   GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQ----- 146
            G I   +  DYE +  +   V A D     + +SA V I VV+ ND  P   YP      
Sbjct: 1311 GIIYAQRSFDYEQDREFEIQVMAKDNGSPPLNSSAIVRICVVDQNDNSPTVLYPSPDVGS 1370

Query: 147  --YELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSGHISIVDL 204
              YE+    +P +    GS++ KV A D D G    LS           +++ H  I   
Sbjct: 1371 AAYEM----VPFSS-EQGSLVTKVVAVDADSGHNAWLSYH-----FLQDSETSHFIIDQY 1420

Query: 205  SA-LNTSTI---------QLVVVATDTGNPPRQASVPAIM----HFPEAIVQQASSKLNS 250
            +  + TS +         ++VV+  D G P   A+V   +    HF + + + ++    S
Sbjct: 1421 TGEIRTSRVFQERDVLRHKVVVIVKDNGTPSLSATVTLTLVVSDHFQQVLPEISNQPRKS 1480

Query: 251  GTSSTVLIILGVVLIVLGFVIILLILY--IHKNKHTKNNGP 289
             + S + I L V + +L F+ +L +++  I K + +K+  P
Sbjct: 1481 DSQSNIQIYLVVAIALLSFLFMLTVMFAIISKCRESKSLTP 1521



 Score = 54.7 bits (130), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 53/211 (25%), Positives = 94/211 (44%), Gaps = 29/211 (13%)

Query: 103  LDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYP--------QYELFL 151
             DYE    +   + A D     + ++  V I V + ND  P+  YP        Q+E+  
Sbjct: 3719 FDYEQMREFTIQIMAKDNGSPPLNSTVIVKICVTDRNDNSPKILYPSSVVEDSAQFEI-- 3776

Query: 152  PHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-DSGHISIVDLSAL 207
              +P +    G +I KV A D D G    LS   L+G     F+I   +G I  + +   
Sbjct: 3777 --VPRS-ANKGELIAKVVAVDADSGHNAWLSYEFLQGSEPSYFTIGRHTGEIRTLRVFQE 3833

Query: 208  NTSTI-QLVVVATDTGNPPRQASVPAIMHFPEAI---VQQASSKLNSGTSSTVLIILGVV 263
              S   +++V+  D GNPPR +++   +   E+    +Q+ ++  +   +S + I L V 
Sbjct: 3834 KESMRHKVIVLVKDHGNPPRTSTINLNLVIAESYQQDIQEINTDFHKSNTSDLDIYLVVA 3893

Query: 264  LIVLGFVIILLILYI-----HKNKHTKNNGP 289
            L  + F+  L ++++      K+ H K + P
Sbjct: 3894 LAFISFLFTLTVMFVIISKCRKSAHAKPSMP 3924



 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 52/198 (26%), Positives = 95/198 (47%), Gaps = 25/198 (12%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGER-------FSIS-RQGD 96
           F++  Y V+  EN+P+N ++L V  +  +D  +   ++  +G         F+I+   G+
Sbjct: 673 FTQEVYKVNIRENIPINSLVLYVNASD-KDEGINAQITYSFGTAATNVLRIFTINPNNGE 731

Query: 97  ISLMQCLDYETEDSYRFTVYATD-TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIP 155
           I  +  +D+E E  Y  +V A D   +  +A V I + + ND       P+  +     P
Sbjct: 732 IKTIGNVDFEEEKYYDISVQAEDHGSLVANAKVLIEITDEND-----NAPEISVTSITTP 786

Query: 156 LA-DLTPGSVIGKVEAADGDKGDRVTLSLR----GPYEKMFSINDSGHISIVDLSALN-- 208
           ++ D  PG+V+  ++A D D G+   +       GP++ + S  +     IV  SAL+  
Sbjct: 787 ISEDSAPGTVVALIKAHDLDSGENGEVDCEIIGVGPFKLLSSTGN--FYKIVTTSALDRE 844

Query: 209 -TSTIQLVVVATDTGNPP 225
            +S   + + ATD G+PP
Sbjct: 845 RSSHYNITIQATDKGSPP 862



 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 55/198 (27%), Positives = 91/198 (45%), Gaps = 25/198 (12%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKY---WLSNDYGERFSISRQ-GDI 97
            FSK  Y VS  E +PVN +++ +     ++  +  V Y    +S    + FSI  Q G+I
Sbjct: 4260 FSKELYQVSLTEGVPVNTLVIDMNATDEDEGVNGHVTYSFSHISKIAEQTFSIDSQTGEI 4319

Query: 98   SLMQCLDYETEDSYRFTVYATD-TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
               + LD+E   +Y   V A D   + + A V I +V+ ND  P          +P    
Sbjct: 4320 RTREELDFEVTKAYVMNVEAADGGGLVSHAKVIIQIVDANDNAPEITLTSVSNSIPE--- 4376

Query: 157  ADLTPGSVIGKVEAADGDKGD------RVTLSLRGPYEKMFSINDSGHISIVDLSALNTS 210
             +  PG+V+  +   D D G+       +T SL  P+E   + + S +  ++  S L+  
Sbjct: 4377 -NSVPGTVVALINIRDVDSGENANVYCHITDSL--PFE--LTSSSSNYYKLLTTSTLDRE 4431

Query: 211  TIQ---LVVVATDTGNPP 225
             +Q   + + ATD G+PP
Sbjct: 4432 AMQEYNITIKATDRGSPP 4449



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 49/200 (24%), Positives = 88/200 (44%), Gaps = 17/200 (8%)

Query: 62   YVLLTVTTNKPRDLRVKYWLSNDYGERFSIS-------RQGDISLMQCLDYETEDSYRFT 114
            Y +     ++  + +V+Y + N + +   IS         G I   Q  D+E      FT
Sbjct: 5288 YAVSASDRDEAENAQVEYSIHNGFIDGSPISSFVYIDKHNGKIYAQQSFDHEEMQHVEFT 5347

Query: 115  VYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFL--PHIPLADLTPGSVIGKVE 169
            V A D     ++++ T+++ +++ ND  P   +PQ    L  P I    L  GS++ KV 
Sbjct: 5348 VTAEDFGSPKLSSNITIHLYILDENDNYPTILFPQASQHLQSPQIIPKALPAGSLVTKVV 5407

Query: 170  AADGDKGDRVTLSLR----GPYEKMFSINDSGHISIVDLSALNTSTIQ-LVVVATDTGNP 224
            A D D G    L+         +    I  +G I +V       S +Q L+V+  D GNP
Sbjct: 5408 AVDADSGYNAWLTYNLTEVSSLDLYKIIPHTGEIKLVRNIQYTDSPLQKLLVLVKDHGNP 5467

Query: 225  PRQASVPAIMHFPEAIVQQA 244
            P+ ++   ++   + + +Q+
Sbjct: 5468 PKSSTATLLIALDDNVNKQS 5487



 Score = 45.4 bits (106), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 38/143 (26%), Positives = 67/143 (46%), Gaps = 21/143 (14%)

Query: 103  LDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADL 159
            LD E    Y  T+ ATD     ++T+ T+ + +++VND  P F  P Y +++P     + 
Sbjct: 3609 LDREEMPEYNITIKATDRGSLPLSTTKTIRLVILDVNDNAPIFEQPSYVVYIPE----NN 3664

Query: 160  TPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSGHISI------------VDLSAL 207
              GS I +V+A+D D  +   +     ++    +  S +IS+             D   +
Sbjct: 3665 PSGSSIFQVQASDPDLDNNAKIVYSTVHKNASDVPVSSYISLNSITGVLYAQRPFDYEQM 3724

Query: 208  NTSTIQLVVVATDTGNPPRQASV 230
               TIQ  ++A D G+PP  ++V
Sbjct: 3725 REFTIQ--IMAKDNGSPPLNSTV 3745



 Score = 43.5 bits (101), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 39/141 (27%), Positives = 67/141 (47%), Gaps = 12/141 (8%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVT---TNKPRDLRVKYWL---SNDYGERFSISRQ-GDI 97
            FS+  Y VS  E+ PVN +++ +     ++  +  + Y+L   S    ++F+I  + G+I
Sbjct: 1844 FSQELYQVSLTESAPVNTLVIQMNATDADEGVNGHITYYLSRISKAAQQKFTIDTETGEI 1903

Query: 98   SLMQCLDYETEDSYRFTVYATD-TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
                 LD+ET  +Y   V A D   + ++A V I +V+ ND  P          +P    
Sbjct: 1904 RTKGTLDFETTKAYEMIVEAQDGGGLFSNAKVVIQIVDANDNAPEIILTSVSNSIPE--- 1960

Query: 157  ADLTPGSVIGKVEAADGDKGD 177
             +  PG+VI  +   D D G+
Sbjct: 1961 -NSVPGTVIALINIRDIDSGE 1980



 Score = 43.1 bits (100), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 62/271 (22%), Positives = 111/271 (40%), Gaps = 27/271 (9%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKP---RDLRVKYWLSNDYGERF------SISRQG 95
            F +  Y V   EN P+ + +  V  + P    + ++ Y + +   + F      SI+   
Sbjct: 2859 FGQTSYVVYVPENNPLGFSIFQVQASDPDLDENAKITYSIVSKNTDAFPVFSCVSINSMS 2918

Query: 96   DISLMQC-LDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYEL-- 149
             +   QC  DYE        V A D     + ++  + I + ++ND  P+  YP   +  
Sbjct: 2919 GVLYAQCSFDYEQLREINIEVEAKDNGSPPLNSTTIIKIYITDLNDNSPKILYPATGVDN 2978

Query: 150  --FLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSI-NDSGHI-SIV 202
                  +P +    G ++ KV A D D G    LS   L+      F+I   +G I ++ 
Sbjct: 2979 SAMFEVVPRSS-NKGDLVTKVVAVDADSGHNAWLSYQFLQVSEPSAFTIAQHTGEIRTLR 3037

Query: 203  DLSALNTSTIQLVVVATDTGNPPRQASVPAIM----HFPEAIVQQASSKLNSGTSSTVLI 258
                      ++VV+  D G PPR  ++   +     F + I Q  +   N+ +   + +
Sbjct: 3038 AFPEKEVLKHKVVVLVKDNGTPPRSTTINLNIIVADSFQQDIPQINNQYQNADSLFNLDM 3097

Query: 259  ILGVVLIVLGFVIILLILYIHKNKHTKNNGP 289
             L V L V+ F+  L ++    +K  K+N P
Sbjct: 3098 YLVVALAVISFLFTLTVMLAVISKCRKSNHP 3128



 Score = 42.4 bits (98), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 51/198 (25%), Positives = 93/198 (46%), Gaps = 25/198 (12%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWLS---NDYGERFSIS-RQGDI 97
           F++  Y V+  EN+P+N  +L V ++   +    ++ Y  S    +    F+I+   G+I
Sbjct: 209 FTQEVYKVNIHENIPINSTVLHVNSSDKDEGINAQITYSFSTAATNVLRMFTINPNNGEI 268

Query: 98  SLMQCLDYETEDSYRFTVYATD-TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
                +D+E    Y  ++ A D   +   A V I +++ ND       P+  +     P+
Sbjct: 269 KTKGNVDFEETKYYDISIQAEDGGGLVAHAKVLIEIIDEND-----NVPEISITSITTPI 323

Query: 157 A-DLTPGSVIGKVEAADGDKGDRVTLSLR----GPYEKMFSINDSGHI-SIVDLSALN-- 208
           + D   G+++  +EA D D G+   +  +    GP+ K+ S   SG+   IV  S L+  
Sbjct: 324 SEDSASGTLVALIEAHDLDSGENGEVDCQIIGVGPF-KLLST--SGNFYKIVTTSTLDRE 380

Query: 209 -TSTIQLVVVATDTGNPP 225
            +S   + + ATD G+PP
Sbjct: 381 RSSHYNITIQATDKGSPP 398



 Score = 41.6 bits (96), Expect = 0.74,   Method: Compositional matrix adjust.
 Identities = 41/140 (29%), Positives = 65/140 (46%), Gaps = 25/140 (17%)

Query: 103  LDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADL 159
            LD E    Y  T+ ATD     ++T+ T+ + +++VND  P F    Y +++P     + 
Sbjct: 2012 LDREEMHEYNITIKATDRGSPSLSTTKTIKLVLLDVNDNPPVFGQASYVVYIPE----NN 2067

Query: 160  TPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSINDSGHISI------------VDLS 205
              GS + +V+A+D D  D  ++T S+       F +  S +ISI             D  
Sbjct: 2068 PSGSSVFQVQASDPDLDDNAKITYSIMNTNTDNFPV--SSYISINSMTGILYAQRPFDYE 2125

Query: 206  ALNTSTIQLVVVATDTGNPP 225
             L    IQ  V+A D G+PP
Sbjct: 2126 QLREFGIQ--VMAKDNGSPP 2143



 Score = 39.3 bits (90), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 60/251 (23%), Positives = 102/251 (40%), Gaps = 38/251 (15%)

Query: 9    QPITLVVRAIQYDNQDRYALATLIVS-----KAGTSLREL----------QFSKNEYSVS 53
            +P+ ++ +A+  + QD Y L           K+GT L  +           F    Y + 
Sbjct: 5005 KPVLVLEKALDREEQDGYQLVLTAFDGGNPPKSGTILISIIVLDSNDNPPVFDSAVYKIG 5064

Query: 54   ALENLPVNYVLLTV---TTNKPRDLRVKYWLSNDYGER----FSISRQ-GDISLMQCLDY 105
              EN P N +++ +    +++  +  + Y+  +   E     FS+ +Q G+I +   +DY
Sbjct: 5065 LKENSPYNTLVIQLHADDSDEGPNGEISYYYEDQISENIANVFSLDQQTGEICVQGKVDY 5124

Query: 106  ETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPG 162
            E + SY  +V A D     M     V + + ++ND  P         F+  IP  D   G
Sbjct: 5125 EYQRSYEISVIARDHGVPEMEGHCIVQVDIEDLNDNAPAITLSS---FVSSIP-EDTPIG 5180

Query: 163  SVIGKVEAADGDKGD----RVTLSLRGPYEKMFSINDSGHIS--IVDLSALNTSTIQLVV 216
            + +      D D G      V +S   P+E +   N    I+  ++D    +  TI L  
Sbjct: 5181 TTVLLFSVKDQDSGKNGEVNVQISPNLPFEIISVQNHYSLITNQLLDRELDDQYTIHL-- 5238

Query: 217  VATDTGNPPRQ 227
             A D G PP Q
Sbjct: 5239 TARDLGLPPLQ 5249


>gi|402910719|ref|XP_003918004.1| PREDICTED: protocadherin-11 X-linked-like [Papio anubis]
          Length = 1054

 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 77/277 (27%), Positives = 120/277 (43%), Gaps = 59/277 (21%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGER-------------FSI 91
           F+ NEY+    ENLP +  +  +T   P           DYGE              F+I
Sbjct: 599 FTHNEYNFYVPENLPKHGTVGLITVTDP-----------DYGENSAVTLSILDENDGFTI 647

Query: 92  SRQ-GDISLMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYP-- 145
             Q G I      D E ++SY F V A D      ++SA V I+VV+VND  P F  P  
Sbjct: 648 DSQTGVIRPNISFDREKQESYTFYVKAEDGGRVSRSSSAKVTINVVDVNDNKPVFIVPPS 707

Query: 146 --QYELFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEK-MFSIND-SGHI 199
              YEL LP        PG+V+ +V A D D G    V  S+ G   + +F IN+ +G+I
Sbjct: 708 NYSYELVLPST-----DPGTVVFQVIAVDNDTGMNAEVRYSIVGENTRDLFEINETTGNI 762

Query: 200 SIVDLSALNTSTIQLVVV-ATDTGNPPRQASVPAIMHFPEAIVQQAS------------- 245
            + +   +    +  V+V A D G P    SV  +  F    V  A+             
Sbjct: 763 IMKEKCDVTDLGLHRVLVKANDLGQPDSLFSVVTVNLFVNESVTNATLINELLHKSTEAP 822

Query: 246 ----SKLNSGTSSTVLIILGVVLIVLGFVIILLILYI 278
               +++   +S T+  +  +V +V G + ++++++I
Sbjct: 823 VTPNTEIADASSPTIDYVKILVAVVAGTITVVVVIFI 859



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 37/114 (32%), Positives = 61/114 (53%), Gaps = 10/114 (8%)

Query: 76  RVKYWLSNDYGERFSISRQ-GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNIS 131
            + Y L  D    FS+ R+ G +++++ LD E E+ Y FTV A D     +T++ TV +S
Sbjct: 529 EINYLLGPDAPPEFSLDRRTGMLTVVKKLDREKEEKYFFTVLAKDNGVPPLTSNVTVFVS 588

Query: 132 VVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDR--VTLSL 183
           V++ ND  P F + +Y  ++P     +L     +G +   D D G+   VTLS+
Sbjct: 589 VIDQNDNTPTFTHNEYNFYVPE----NLPKHGTVGLITVTDPDYGENSAVTLSI 638



 Score = 38.9 bits (89), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 38/139 (27%), Positives = 69/139 (49%), Gaps = 15/139 (10%)

Query: 103 LDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADL 159
           LD E +D+Y   V   D      +++A + +SV + ND  P F+  + E+ +P     + 
Sbjct: 236 LDREEKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVFKETEIEVSIPE----NA 291

Query: 160 TPGSVIGKVEAADGDKGD--RVTLSLRGPY----EKMFSIN-DSGHISIVD-LSALNTST 211
             G+ + ++ A D D G+  R+  S         +++F +N  +G I+I + L    T  
Sbjct: 292 PVGTSVTQLHATDADIGENARIHFSFSNLVSNIAKRLFHLNTTTGLITIKEPLDREETPN 351

Query: 212 IQLVVVATDTGNPPRQASV 230
            +L+V+A+D G  P +A V
Sbjct: 352 HKLLVLASDGGLVPARAMV 370


>gi|393906361|gb|EJD74255.1| cadherin domain-containing protein [Loa loa]
          Length = 626

 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 64/215 (29%), Positives = 103/215 (47%), Gaps = 25/215 (11%)

Query: 56  ENLPVNYVLLTVTTNKPRDLRVKYWLS--NDYGERFSISRQGDISLMQCLDYETEDSYRF 113
           E  P+N +++T+  +  +  R+ Y +S  N+  +   IS  G +  M   D E    Y  
Sbjct: 297 EATPLNSIIITLGNDSTKG-RMYYMISGGNEDNKFAIISEIGTLITMNSFDREETSVYNL 355

Query: 114 TVYATDTLMTTS------ATVNISVVNVNDWDPRFRYPQYELFLPHIPLAD---LTPGSV 164
            V   +T  + S        V +++ ++ND  P F  PQ       I ++D   LTP   
Sbjct: 356 QV---ETRSSNSDEHLYWTIVQVAIADINDNAPIFTDPQPVRL--RIKISDELNLTPNMY 410

Query: 165 IGKVEAADGDKGD--RVTLSLRGPYEKMFSINDSGHISI--VDLSALNTSTIQLVVVATD 220
           +G+V   D D G+  RV L +  P +K+FSINDSG + +  V LS  +    ++ V+A D
Sbjct: 411 VGQVNVEDPDDGNNGRVRLRIVPPMDKLFSINDSGAVMVNGVLLSG-HFGEHRMTVIAAD 469

Query: 221 TGNPPRQASVPAIMHFPEAIVQQASSKLNSGTSST 255
            G+PP +  V  I++  + +    S  LNS   ST
Sbjct: 470 HGDPPLETRVNLIINIEDTL---QSVSLNSNQLST 501


>gi|432879584|ref|XP_004073499.1| PREDICTED: uncharacterized protein LOC101171842 [Oryzias latipes]
          Length = 8377

 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 62/201 (30%), Positives = 92/201 (45%), Gaps = 21/201 (10%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDL---RVKYWLSNDYGE--RFSISRQ-GDIS 98
            FSK+ YSV   EN  ++ ++L V    P +     V+Y   +D      F+I R  G+I 
Sbjct: 3945 FSKDTYSVQLQENALLDKIILKVQATDPDEGPNGDVEYAFGDDMTSIALFAIDRNTGEIR 4004

Query: 99   LMQCLDYETEDSYRFTVYATDTL---MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIP 155
            +   +DYET D Y+  V A+D     MTT   V I V +VND +P          +P   
Sbjct: 4005 VKGHIDYETADVYKLDVQASDKGQPPMTTDCRVIIKVQDVNDNEPEILVTSLSSMVPE-- 4062

Query: 156  LADLTPGSVIGKVEAADGDKG--DRVTLSLRG--PYEKMFSINDSGHISIVDLSALNTST 211
              D   G+V+  +   D D G   +V   L    P+E   S  ++   S+V  + L+  T
Sbjct: 4063 --DSKHGTVVALITVKDSDSGVNGKVICHLTENVPFELKPSFKENV-FSLVTKNTLDRET 4119

Query: 212  I---QLVVVATDTGNPPRQAS 229
            +    + V ATD G+PP   S
Sbjct: 4120 VSHYDISVTATDCGDPPLSTS 4140



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/142 (35%), Positives = 72/142 (50%), Gaps = 16/142 (11%)

Query: 101  QCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLA 157
            Q LD E+   Y   + ATD     ++T  TV+I V +VND  P F     EL+L      
Sbjct: 3172 QPLDRESVSHYDILITATDCGQPTLSTFKTVSIDVADVNDNKPEFTQNPVELYLTE---- 3227

Query: 158  DLTPGSVIGKVEAADGDKGDRVTLS--LRGPYEKMFS-----IN-DSGHISIV-DLSALN 208
            + TPG+VI  V A D D  +   L+  +RG   ++ S     IN ++G IS +      +
Sbjct: 3228 NNTPGNVICSVSALDKDLNENAILTYVVRGDTGQLISAAFLNINPETGEISALKSFDFES 3287

Query: 209  TSTIQLVVVATDTGNPPRQASV 230
              T Q  VVATD+G+PP  ++V
Sbjct: 3288 VKTFQFHVVATDSGSPPLSSNV 3309



 Score = 55.8 bits (133), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 49/202 (24%), Positives = 95/202 (47%), Gaps = 31/202 (15%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGER----FSISRQ-GD 96
            F+K  YS +  EN+P++  ++ V     +K  +  + Y   N+  ++    FSI+ + G+
Sbjct: 7803 FTKETYSATIRENIPIDTFVIQVNATDLDKGANAEIVYSFGNEVNQKTSELFSINEKTGE 7862

Query: 97   ISLMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
            I++   +D+E   SY   V A+D     +T+  +V I+V++VND  P      +   +  
Sbjct: 7863 ITVKGQIDFEKSKSYEIDVQASDKGQVPLTSDKSVKINVIDVNDNPPEIEVTSFSNSIKE 7922

Query: 154  IPLADLTPGSVIGKVEAADGDKG--DRVTLSLRG--PY-------EKMFSINDSGHISIV 202
                D   G+ +  +   D D G   +V  +++   P+       E MF++     +S+ 
Sbjct: 7923 ----DSKIGTTVALISIRDSDSGINGKVICTIKQDVPFTLSPSLKENMFAV-----VSMS 7973

Query: 203  DLSALNTSTIQLVVVATDTGNP 224
             L   NT    + ++A D+G+P
Sbjct: 7974 QLDRENTPHYDVTIIAKDSGDP 7995



 Score = 55.1 bits (131), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 72/284 (25%), Positives = 119/284 (41%), Gaps = 36/284 (12%)

Query: 13  LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKP 72
           L + A+      R   A++IV    T+  +  F K+ Y+V  +EN P+  ++L +     
Sbjct: 385 LTLTAVDGGKPARSGTASVIVHVLDTNDNKPTFDKSLYNVKIMENSPIGSLVLHLNATDS 444

Query: 73  -----RDLRVKYWL--SNDYGERFSIS-RQGDISLMQCLDYETEDSYRFTVYATD---TL 121
                 D+   Y L  S    E F ++   G+I++   L+YE  + Y   V ATD     
Sbjct: 445 DEGSNSDITYSYSLYTSEKTQETFHLNPTSGEITVRGMLNYEEFNIYDMEVIATDKGANS 504

Query: 122 MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLA-DLTPGSVIGKVEAADGDKGDRVT 180
           ++   T+ I V ++ND  P      ++      P++ D+   +VI  V  +D D G+   
Sbjct: 505 LSGQCTIKILVEDMNDNHPELSIKSFQS-----PVSEDIKLDTVIAVVSVSDKDSGENGI 559

Query: 181 LSLRGPYE-----KMFSINDSGHISIVDLSALNTSTIQLVVVATDTGNPPRQASVPAIMH 235
           + L  P +     + FS  D  H              +LVVVA D G P   A+V   + 
Sbjct: 560 VDLHIPDDMPFKLRKFSYRDPRH-------------QRLVVVAKDNGEPALSATVTIKLS 606

Query: 236 FPEAIVQQASSKLNSGTSSTVLIILGVVLIV-LGFVIILLILYI 278
             E  V+  S          +   L + L++ LG V  LL++ I
Sbjct: 607 TEETAVKAYSDMTEVPLEYDIFSDLNLYLVIGLGSVSFLLLITI 650



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 44/141 (31%), Positives = 68/141 (48%), Gaps = 17/141 (12%)

Query: 103  LDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADL 159
            LD E    Y  T+ A D     +T+  T+++ V + ND  P F    Y  +L      + 
Sbjct: 7186 LDREETSRYDITITAKDAGEPSLTSEKTISVYVSDTNDNKPEFSLNPYTFYLTE----NN 7241

Query: 160  TPGSVIGKVEAADGDKGDRVTLSLR-----GPYEKM---FSIN-DSGHI-SIVDLSALNT 209
            TPG+ +  V+A D D+G+   +S       G   KM    SIN D+G + ++      + 
Sbjct: 7242 TPGAPVFSVQATDHDEGENALISYNLFRNAGEDNKMTSFLSINSDNGEVVALKSFDFESV 7301

Query: 210  STIQLVVVATDTGNPPRQASV 230
             T Q  VVATD+G+PP  ++V
Sbjct: 7302 KTFQFHVVATDSGSPPLSSNV 7322



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 53/198 (26%), Positives = 90/198 (45%), Gaps = 23/198 (11%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVT-------TNKPRDLRVKYWLSNDYGERFSISRQ-GD 96
            F++  Y ++  EN+P+N V+LT+        TN   +      L     E F + R+ G+
Sbjct: 4729 FTQESYEITLQENIPLNTVILTMNASDLDEGTNGEIEYSFGKTLKKRVYEAFQLDRKTGE 4788

Query: 97   ISLMQCLDYETEDSYRFTVYATDTL---MTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
            I +   +D+E  D Y+  V A+D     +T    V I V +VND  P          L +
Sbjct: 4789 IRVKGTVDFEETDVYKLDVEASDKGTPPLTGECRVIIKVKDVNDNPPEIEITS----LSN 4844

Query: 154  IPLADLTPGSVIGKVEAADGDKG--DRVTLSLR--GPYEKMFSINDSGHISIVDLSALNT 209
                D  PG+VI  +   D D G   ++   ++  GP+E   S  ++ + S+     L+ 
Sbjct: 4845 TVSEDSKPGTVISLLSVTDKDSGLNGKILTDIQTDGPFELKPSYKENIY-SVTTKDILDR 4903

Query: 210  STI---QLVVVATDTGNP 224
              +   +++V ATD G+P
Sbjct: 4904 EKVPHYEIIVKATDCGDP 4921



 Score = 52.0 bits (123), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 48/145 (33%), Positives = 69/145 (47%), Gaps = 19/145 (13%)

Query: 100  MQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
            M  LD E    Y  T+ A D+     T   T+N+ V +VND  P F    Y  ++     
Sbjct: 5692 MSQLDRENTPHYDVTIIAKDSGDPSFTVEKTINVVVSDVNDNFPEFSMSPYTFYITE--- 5748

Query: 157  ADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSIND-SGHISI----VDLSALNT-- 209
             +  PG+ +  V+A D D G+   +S  G   +M S N  S  +SI     D+SAL +  
Sbjct: 5749 -NNIPGASVFSVKAFDRDDGENALVSY-GILREMNSDNKLSSFLSINSETGDISALKSFD 5806

Query: 210  ----STIQLVVVATDTGNPPRQASV 230
                 T Q  VVATD+G+PP  ++V
Sbjct: 5807 FESVKTFQFHVVATDSGSPPLSSNV 5831



 Score = 51.6 bits (122), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 48/141 (34%), Positives = 69/141 (48%), Gaps = 17/141 (12%)

Query: 103  LDYETEDSYRFTVYATDTL---MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADL 159
            LD ET   Y  +V ATD     ++TS  +NI V +VND  P F +    L+L      + 
Sbjct: 4115 LDRETVSHYDISVTATDCGDPPLSTSRILNIQVSDVNDNIPEFPHNSLPLYLTE----NN 4170

Query: 160  TPGSVIGKVEAADGDKGDRVTLS---LRGPYE-KMFSINDSGHISIVDLSALNT------ 209
            +PG  I  V A D D  +   +S   +RG  E K  +   + H    ++SAL +      
Sbjct: 4171 SPGKSIFSVSAVDKDLNENAAVSYHLIRGEGENKDLTSFLNIHAETGEISALKSFDFERL 4230

Query: 210  STIQLVVVATDTGNPPRQASV 230
             T Q  VVATD+G+PP  ++V
Sbjct: 4231 KTFQFHVVATDSGSPPLSSNV 4251



 Score = 51.6 bits (122), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 54/204 (26%), Positives = 103/204 (50%), Gaps = 21/204 (10%)

Query: 92   SRQGDISLMQCLDYETEDSYRFTVYATDTL---MTTSATVNISVVNVNDWDPRFRYP--- 145
            S  GDIS ++  D+E+  +++F V ATD+    ++++ TVN+ +++ ND  P   YP   
Sbjct: 5794 SETGDISALKSFDFESVKTFQFHVVATDSGSPPLSSNVTVNVFILDQNDNAPVILYPVSS 5853

Query: 146  -QYELFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYE-KMFSIND-SGHI- 199
                  +  IP  ++  G ++ KV A D D G    +  SL+   +  +F+++  +G I 
Sbjct: 5854 NGSAEGVEEIP-RNVNAGHLVTKVRAYDADIGYNGWLLFSLQQVTDHSLFALDRYTGQIR 5912

Query: 200  SIVDLSALNTSTIQLVVVATDTGNPPRQASVPAIMH-------FPEAIVQQASSKLNSGT 252
            ++   +  + +  +L+++  D GN    A+   I+        F  + VQ A++++    
Sbjct: 5913 TLRSFTETDEAEHKLLILVKDNGNVSLSATATVIVKLVEPKEAFAASDVQSAAAEVEDSH 5972

Query: 253  SSTVLII-LGVVLIVLGFVIILLI 275
             +  LII LG V ++    II+LI
Sbjct: 5973 VTFYLIITLGSVSLLFLISIIVLI 5996



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 64/258 (24%), Positives = 119/258 (46%), Gaps = 27/258 (10%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTT-----NKPRDLRVKYWLSNDYGERFSI-SRQGDI 97
            QFS+N   V   EN  +   + +V+      N+   +       ND     SI S  G I
Sbjct: 6510 QFSENPLYVYLTENNKIGANVFSVSAEDMDVNENSAILYHIVRENDATSFLSINSENGQI 6569

Query: 98   SLMQCLDYETEDSYRFTVYATDTL---MTTSATVNISVVNVNDWDPRFRYP----QYELF 150
            S ++  D+E+  +++F V ATD+    ++++ TVN+ +++ ND  P   YP         
Sbjct: 6570 SALKSFDFESVKTFQFHVVATDSGSPPLSSNVTVNVFILDQNDNAPVILYPVSSNGSAEG 6629

Query: 151  LPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYE-KMFSIND-SGHI-SIVDLS 205
            +  IP  ++  G ++ KV A D D G    +  SL+   +  +F+++  +G I ++   +
Sbjct: 6630 VEEIP-RNVNAGHLVTKVRAYDADIGYNGWLLFSLQQVTDHSLFALDRYTGQIRTLRSFT 6688

Query: 206  ALNTSTIQLVVVATDTGNPPRQASVPAIMHFPEAIVQQASSKLNSGTSST--------VL 257
              + +  +L+++  D GN    A+   I+   E     A+S + S  +          ++
Sbjct: 6689 ETDEAEHKLLILVKDNGNVSLSATATVIVKLVEPKEAFAASDVQSAAAEDEDSHVTFYLI 6748

Query: 258  IILGVVLIVLGFVIILLI 275
            I LG V ++    II+LI
Sbjct: 6749 ITLGSVSLLFLISIIVLI 6766



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 67/262 (25%), Positives = 119/262 (45%), Gaps = 32/262 (12%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLR---------VKYWLSNDYGERFSI-SR 93
            QFS N      LEN     +L +V+     DL          VK   +ND     +I S 
Sbjct: 4942 QFSHNPLYFYLLENNVAGTLLFSVSATD-MDLNENAVISYHIVKEGTNNDVNAVLNINSE 5000

Query: 94   QGDISLMQCLDYETEDSYRFTVYATDTL---MTTSATVNISVVNVNDWDPRFRYP----Q 146
             G I  M+  D+E+  +++F V ATD+    ++++ TVN+ +++ ND  P   YP     
Sbjct: 5001 NGQIIGMKSFDFESVKTFQFHVVATDSGSPPLSSNVTVNVFILDQNDNAPVILYPVSSNG 5060

Query: 147  YELFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYE-KMFSIND-SGHI-SI 201
                +  IP  ++  G ++ KV A D D G    +  SL+   +  +F+++  +G I ++
Sbjct: 5061 SAEGVEEIP-RNVNAGHLVTKVRAYDADIGYNGWLLFSLQQVTDHSLFALDRYTGQIRTL 5119

Query: 202  VDLSALNTSTIQLVVVATDTGNPPRQASVPAIMHFPEAIVQQASSKLNSGTSST------ 255
               +  + +  +L+++  D GN    A+   I+   E     A+S + S  +        
Sbjct: 5120 RSFTETDEAEHKLLILVKDNGNVSLSATATVIVKLVEPKEAFAASDVQSAAAEDEDSHVT 5179

Query: 256  --VLIILGVVLIVLGFVIILLI 275
              ++I LG V ++    II+LI
Sbjct: 5180 FYLIITLGSVSLLFLISIIVLI 5201



 Score = 48.5 bits (114), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 62/262 (23%), Positives = 123/262 (46%), Gaps = 32/262 (12%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLR----VKYWLSNDYGERFSIS------R 93
            +F++N   +   EN     V+ +V+    +DL     + Y +  D G+  S +       
Sbjct: 3215 EFTQNPVELYLTENNTPGNVICSVSA-LDKDLNENAILTYVVRGDTGQLISAAFLNINPE 3273

Query: 94   QGDISLMQCLDYETEDSYRFTVYATDTL---MTTSATVNISVVNVNDWDPRFRYP----Q 146
             G+IS ++  D+E+  +++F V ATD+    ++++ TVN+ +++ ND  P   YP     
Sbjct: 3274 TGEISALKSFDFESVKTFQFHVVATDSGSPPLSSNVTVNVFILDQNDNAPVILYPVSSNG 3333

Query: 147  YELFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYE-KMFSIND-SGHI-SI 201
                +  IP  ++  G ++ KV A D D G    +  SL+   +  +F+++  +G I ++
Sbjct: 3334 SAEGVEEIP-RNVNAGHLVTKVRAYDADIGYNGWLLFSLQQVTDHSLFALDRYTGQIRTL 3392

Query: 202  VDLSALNTSTIQLVVVATDTGNPPRQASVPAIMHFPEAIVQQASSKLNSGTSST------ 255
               +  + +  +L+++  D GN    A+   I+   E     A+S + S  +        
Sbjct: 3393 RSFTETDEAEHKLIILVKDNGNVSLSATATVIVKLVEPKEAFAASDVKSAAAEDEDSHVT 3452

Query: 256  --VLIILGVVLIVLGFVIILLI 275
              ++I LG V ++    II+LI
Sbjct: 3453 FYLIITLGSVSLLFLISIIVLI 3474



 Score = 47.8 bits (112), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 41/144 (28%), Positives = 67/144 (46%), Gaps = 17/144 (11%)

Query: 100  MQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
            M  LD E    Y  T+ A D+     T   T+N+ V +VND  P F    Y  ++     
Sbjct: 7972 MSQLDRENTPHYDVTIIAKDSGDPSFTVEKTINVVVSDVNDNFPEFSMSPYAFYITE--- 8028

Query: 157  ADLTPGSVIGKVEAADGDKGDRVTLS---LR-----GPYEKMFSIN-DSGHI-SIVDLSA 206
             +  PG+ +  V+A D D G+   +S   LR       +    ++N +SG + ++     
Sbjct: 8029 -NNIPGASVFSVKAFDRDDGENALVSYGILRERDTDNLFTSFLNVNSESGEVVALKSFDF 8087

Query: 207  LNTSTIQLVVVATDTGNPPRQASV 230
             +  T Q  +VATD+G+PP  ++V
Sbjct: 8088 ESVKTFQFHIVATDSGSPPLSSNV 8111



 Score = 47.8 bits (112), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 49/208 (23%), Positives = 92/208 (44%), Gaps = 37/208 (17%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYG----------ERFSI 91
            F+K  YS +  EN+P++  ++ V     +K  +  + Y     Y           E FSI
Sbjct: 5517 FTKETYSATIRENIPIDTGVIQVNAKDLDKGANAEIVYSFEIVYSFGNEVKSKITELFSI 5576

Query: 92   SRQ-GDISLMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQY 147
            + + G+I++   +D+E    Y   V A+D     +T+  +V I+V++VND  P      +
Sbjct: 5577 NEKTGEITVKGQIDFEKSKIYEIDVQASDKGPVPLTSDKSVKINVIDVNDNPPEIEVTSF 5636

Query: 148  ELFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRG--PY-------EKMFSINDS 196
               +      D   G+ +  +   D D G   +V  +++   P+       E MF++   
Sbjct: 5637 SNSIKE----DSKIGTTVALISVRDSDSGINGKVICTIKQDVPFTLSPSLQENMFAV--- 5689

Query: 197  GHISIVDLSALNTSTIQLVVVATDTGNP 224
              +S+  L   NT    + ++A D+G+P
Sbjct: 5690 --VSMSQLDRENTPHYDVTIIAKDSGDP 5715



 Score = 47.0 bits (110), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 51/204 (25%), Positives = 99/204 (48%), Gaps = 21/204 (10%)

Query: 92   SRQGDISLMQCLDYETEDSYRFTVYATDTL---MTTSATVNISVVNVNDWDPRFRYP--- 145
            S  G+IS ++  D+E+  +++F V ATD+    ++++ TVN+ +++ ND  P   YP   
Sbjct: 2507 SETGEISALKSFDFESVKTFQFHVVATDSGSPPLSSNVTVNVFILDQNDNAPVILYPVSS 2566

Query: 146  -QYELFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYE-KMFSIND-SGHI- 199
                  +  IP  ++  G ++ KV A D D G    +  SL+   +  +F+++  +G I 
Sbjct: 2567 NGSAEGVEEIP-RNVNAGHLVTKVRAYDADIGYNGWLLFSLQQVTDHSLFALDRYTGQIR 2625

Query: 200  SIVDLSALNTSTIQLVVVATDTGNPPRQASVPAIMHFPEAIVQQASSKLNSGTSST---- 255
            ++   +  +    +L+++  D GN    A+   I+   E     A+S + S  +      
Sbjct: 2626 TLRSFTETDEVEHKLLILVKDNGNVSLSATATVIVKLVEPKEAFAASDVQSAAAEDEDSH 2685

Query: 256  ----VLIILGVVLIVLGFVIILLI 275
                ++I LG V ++    II+LI
Sbjct: 2686 VTFYLIITLGSVSLLFLISIIVLI 2709



 Score = 47.0 bits (110), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 63/263 (23%), Positives = 124/263 (47%), Gaps = 33/263 (12%)

Query: 44   QFSKNEYSVSALEN----LPVNYVLLTVTTNKPRDLRVKYWLSNDYGERFSI-------S 92
            +FS N Y+    EN     PV + +     ++  +  + Y L  + GE   +       S
Sbjct: 7227 EFSLNPYTFYLTENNTPGAPV-FSVQATDHDEGENALISYNLFRNAGEDNKMTSFLSINS 7285

Query: 93   RQGDISLMQCLDYETEDSYRFTVYATDTL---MTTSATVNISVVNVNDWDPRFRYP---- 145
              G++  ++  D+E+  +++F V ATD+    ++++ TVN+ +++ ND  P   YP    
Sbjct: 7286 DNGEVVALKSFDFESVKTFQFHVVATDSGSPPLSSNVTVNVFILDQNDNAPVILYPVSSN 7345

Query: 146  QYELFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYE-KMFSIND-SGHI-S 200
                 +  IP  ++  G ++ KV A D D G    +  SL+   +  +F+++  +G I +
Sbjct: 7346 GSAEGVEEIP-RNVNAGHLVTKVRAYDADIGYNGWLLFSLQQVTDHSLFALDRYTGQIRT 7404

Query: 201  IVDLSALNTSTIQLVVVATDTGNPPRQASVPAIMH-------FPEAIVQQASSKLNSGTS 253
            +   +  + +  +L+++  D GN    A+   I+        F  + VQ A++++     
Sbjct: 7405 LRSFTETDEAEHKLLILVKDNGNVSLSATATVIVKLVEPKEAFAASDVQSAAAEVEDSHV 7464

Query: 254  STVLII-LGVVLIVLGFVIILLI 275
            +  LII LG V ++    II+LI
Sbjct: 7465 TFYLIITLGSVSLLFLISIIVLI 7487



 Score = 46.6 bits (109), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 50/204 (24%), Positives = 99/204 (48%), Gaps = 21/204 (10%)

Query: 92   SRQGDISLMQCLDYETEDSYRFTVYATDTL---MTTSATVNISVVNVNDWDPRFRYP--- 145
            +  G+IS ++  D+E   +++F V ATD+    ++++ TVN+ +++ ND  P   YP   
Sbjct: 4214 AETGEISALKSFDFERLKTFQFHVVATDSGSPPLSSNVTVNVFILDQNDNAPVILYPVSS 4273

Query: 146  -QYELFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYE-KMFSIND-SGHI- 199
                  +  IP  ++  G ++ KV A D D G    +  SL+   +  +F+++  +G I 
Sbjct: 4274 NGSAEGVEEIP-RNVNAGHLVTKVRAYDADIGYNGWLLFSLQQVTDHSLFALDRYTGQIR 4332

Query: 200  SIVDLSALNTSTIQLVVVATDTGNPPRQASVPAIMHFPEAIVQQASSKLNSGTSST---- 255
            ++   +  + +  +L+++  D GN    A+   I+   E     A+S + S  +      
Sbjct: 4333 TLRSFTETDEAEHKLLILVKDNGNVSLSATATVIVKLVEPKEAFAASDVQSAAAEDEDSH 4392

Query: 256  ----VLIILGVVLIVLGFVIILLI 275
                ++I LG V ++    II+LI
Sbjct: 4393 VTFYLIITLGSVSLLFLISIIVLI 4416



 Score = 45.8 bits (107), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 52/220 (23%), Positives = 107/220 (48%), Gaps = 23/220 (10%)

Query: 92   SRQGDISLMQCLDYETEDSYRFTVYATDTL---MTTSATVNISVVNVNDWDPRFRYP--- 145
            S  G++  ++  D+E+  +++F + ATD+    ++++ TVN+ +++ ND  P   YP   
Sbjct: 8074 SESGEVVALKSFDFESVKTFQFHIVATDSGSPPLSSNVTVNVFILDQNDNAPVILYPVSS 8133

Query: 146  -QYELFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYE-KMFSIND-SGHI- 199
                  +  IP  ++  G ++ KV A D D G    +  SL+   +  +F+++  +G I 
Sbjct: 8134 NGSAEGVEEIP-RNVNAGHLVTKVRAYDADIGYNGWLLFSLQQVTDHSLFALDRYTGQIR 8192

Query: 200  SIVDLSALNTSTIQLVVVATDTGNPPRQASVPAIMHFPEAIVQQASSKLNSGTSST---- 255
            ++   +  + +  +L+++  D GN    A+   I+   E     A+S + S  +      
Sbjct: 8193 TLRSFTETDEAEHKLLILVKDNGNVSLSATATVIVKLVEPKEAFAASDVQSAAAEDEDSH 8252

Query: 256  ----VLIILG-VVLIVLGFVIILLILYIHKN-KHTKNNGP 289
                ++I LG V L+ L  +I+L+ +   K+  +T  N P
Sbjct: 8253 VTFYLIITLGSVSLLFLISIIVLIAMQCSKSTDYTSKNMP 8292



 Score = 45.4 bits (106), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 49/201 (24%), Positives = 98/201 (48%), Gaps = 21/201 (10%)

Query: 95   GDISLMQCLDYETEDSYRFTVYATDTL---MTTSATVNISVVNVNDWDPRFRYP----QY 147
            G IS ++  D+E+  +++F V ATD+    ++++ TVN+ +++ ND  P   YP      
Sbjct: 1826 GTISALKSFDFESVKTFQFHVVATDSGSPPLSSNVTVNVFILDQNDNAPVILYPVSSNGS 1885

Query: 148  ELFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYE-KMFSIND-SGHI-SIV 202
               +  IP  ++  G ++ KV A D D G    +  SL+   +  +F+++  +G I ++ 
Sbjct: 1886 AEGVEEIP-RNVNAGHLVTKVRAYDADIGYNGWLLFSLQQVTDHSLFALDRYTGQIRTLR 1944

Query: 203  DLSALNTSTIQLVVVATDTGNPPRQASVPAIMHFPEAIVQQASSKLNSGTSST------- 255
              +  + +  +++++  D GN    A+   I+   E     A+S + S  +         
Sbjct: 1945 SFTETDEAEHKMLILVKDNGNVSLSATATVIVKLVEPKEAFAASDVQSAAAEDEDSHVTF 2004

Query: 256  -VLIILGVVLIVLGFVIILLI 275
             ++I LG V ++    II+LI
Sbjct: 2005 YLIITLGSVSLLFLISIIVLI 2025



 Score = 42.7 bits (99), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 50/206 (24%), Positives = 85/206 (41%), Gaps = 31/206 (15%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSN----DYGERFSISR-QGD 96
            FSK+ Y+VS  EN  +  +++ +     ++  +  ++Y           E F + R  G+
Sbjct: 2236 FSKDVYTVSLNENAALGTLVIKLNATDLDEGSNGDIEYTFGKTQRKKAHEVFELDRVTGE 2295

Query: 97   ISLMQCLDYETEDSYRFTVYATDTLM---TTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
            I +   +D+E  + YR  V A+D      T  + V I + ++ND +P          +P 
Sbjct: 2296 IRVKGNVDFEETELYRLDVQASDKGQPPWTGESRVVIKIQDLNDNEPEVEITSLSSSIPE 2355

Query: 154  IPLADLTPGSVIGKVEAADGDKGDRVTLSLR----GPY-------EKMFSINDSGHISIV 202
                D  PG+VI  +   D D G    +  R     P+       E MFS+   G     
Sbjct: 2356 ----DSKPGTVISLITVKDRDSGSNGKVVCRINEEVPFDLTPSIEENMFSLVTKGR---- 2407

Query: 203  DLSALNTSTIQLVVVATDTGNPPRQA 228
             L   + S   + ++A+D G P   A
Sbjct: 2408 -LDRESVSYYDITIIASDCGKPQLSA 2432



 Score = 42.0 bits (97), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 51/230 (22%), Positives = 96/230 (41%), Gaps = 20/230 (8%)

Query: 12   TLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTT-- 69
            TL + A+      R   A++IV     +     F K+ Y V  +EN P+  +++ +    
Sbjct: 942  TLTLTAVDGGVPTRTGTASIIVRVLDVNDNAPSFDKDTYVVDVMENSPIGSLVIKLNATD 1001

Query: 70   -NKPRDLRVKYWLSNDYGER----FSIS-RQGDISLMQCLDYETEDSYRFTVYATDTLMT 123
             ++  +  V Y  S    ER    F ++   G+I + + ++YE    Y   V A+D  ++
Sbjct: 1002 LDEGSNADVVYSYSLYTSERTQNVFQLNPENGEIRVKEMINYEDLQLYEMEVIASDKGLS 1061

Query: 124  T---SATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVT 180
            +      V I + ++ND  P      ++  +      ++   +VI  V  +D D G+   
Sbjct: 1062 SLSGQCKVKIQITDMNDNHPEIYIKSFQSPVKE----NVATDTVIAVVSVSDKDSGENGI 1117

Query: 181  LSLRGPYEKMFSINDSG--HISIVDLSALNTSTI---QLVVVATDTGNPP 225
            + L  P    F +  S   +  +V   AL+   +    +    TD G+PP
Sbjct: 1118 VDLHIPDNMPFKLRKSSDNYYELVVSEALDREKVPEYDITFTVTDRGSPP 1167



 Score = 41.6 bits (96), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 52/198 (26%), Positives = 91/198 (45%), Gaps = 23/198 (11%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYG----ERFSISRQ-GD 96
            F++  YS    EN+ V   ++TV     ++  +  V+Y    +      E FSI++  G+
Sbjct: 3002 FTQEIYSAIINENIKVGSNVITVNATDLDEGVNADVEYSFGGELDPQIYEIFSINKHSGE 3061

Query: 97   ISLMQCLDYETEDSYRFTVYATDTL---MTTSATVNISVVNVNDWDPRFRYPQYELF-LP 152
            IS+   +D+E  + Y+  V+A+D     M     V I V++ ND       P+ E+  L 
Sbjct: 3062 ISVKGEIDFEKAEVYKLDVHASDKGQPPMNADCRVIIKVLDQND-----NLPEIEVTSLS 3116

Query: 153  HIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRG--PYEKMFSINDSGHISIVD--LSA 206
                 D  PG+V+  +   D D G   +V  SL+   P++   S  ++ +  +V   L  
Sbjct: 3117 KSVSEDSKPGTVVSLISITDRDSGLNGKVICSLQDSVPFDLKPSFQENMYSLVVKQPLDR 3176

Query: 207  LNTSTIQLVVVATDTGNP 224
             + S   +++ ATD G P
Sbjct: 3177 ESVSHYDILITATDCGQP 3194



 Score = 40.4 bits (93), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 39/138 (28%), Positives = 65/138 (47%), Gaps = 12/138 (8%)

Query: 103  LDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADL 159
            LD ET + Y  T+ A D    +++++  + + V +VND  P F    Y  ++    +A +
Sbjct: 1725 LDKETSEVYSVTITAQDLGYPVLSSTKVIKVDVKDVNDNSPVFPQTPYTFYVNENNVAGM 1784

Query: 160  TPGSVIGKVEAADGDKGDRVTLSLRGPYE-----KMFSIND-SGHISIV-DLSALNTSTI 212
            +  SV       DG +   +T SL             +IN+ +G IS +      +  T 
Sbjct: 1785 SIFSV--SASDKDGAENAEITYSLDRKSSGSIVTSFLNINEVNGTISALKSFDFESVKTF 1842

Query: 213  QLVVVATDTGNPPRQASV 230
            Q  VVATD+G+PP  ++V
Sbjct: 1843 QFHVVATDSGSPPLSSNV 1860



 Score = 40.4 bits (93), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 38/141 (26%), Positives = 65/141 (46%), Gaps = 15/141 (10%)

Query: 47   KNEYSVSALENLPVNYVLLTVT---TNKPRDLRVKYWLSNDY----GERFSI-SRQGDIS 98
            K +Y+V+  EN P    LLTV    +++  +  ++Y L + +     + F++ S+ G ++
Sbjct: 1555 KQKYTVTVKENAPTGTYLLTVNASDSDEGVNSEIEYSLRSKFRGLVSDPFALNSKTGKVT 1614

Query: 99   LMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIP 155
            +   LDYE +  Y   V A D     ++++  V I V +VND  P          L    
Sbjct: 1615 VNGNLDYEEKQVYEINVMAADKGAVSLSSNCKVIIRVEDVNDNQPDIDITS----LSSQI 1670

Query: 156  LADLTPGSVIGKVEAADGDKG 176
              D  PG+V+  +   D D G
Sbjct: 1671 AEDAPPGTVVALMGVTDRDSG 1691



 Score = 38.5 bits (88), Expect = 5.7,   Method: Compositional matrix adjust.
 Identities = 46/181 (25%), Positives = 79/181 (43%), Gaps = 29/181 (16%)

Query: 63   VLLTVTTNKPRDLRVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDT-- 120
            +L  + T+ P +L+  Y   N Y           ++    LD E    Y   V ATD   
Sbjct: 4872 ILTDIQTDGPFELKPSYK-ENIYS----------VTTKDILDREKVPHYEIIVKATDCGD 4920

Query: 121  -LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRV 179
              +++  T +I + +VND  P+F +     +L    L +   G+++  V A D D  +  
Sbjct: 4921 PSLSSFKTFSIELSDVNDNSPQFSHNPLYFYL----LENNVAGTLLFSVSATDMDLNENA 4976

Query: 180  TLSLRGPYE-------KMFSINDSGHISIVDLSALN---TSTIQLVVVATDTGNPPRQAS 229
             +S     E        + +IN S +  I+ + + +     T Q  VVATD+G+PP  ++
Sbjct: 4977 VISYHIVKEGTNNDVNAVLNIN-SENGQIIGMKSFDFESVKTFQFHVVATDSGSPPLSSN 5035

Query: 230  V 230
            V
Sbjct: 5036 V 5036


>gi|332019447|gb|EGI59930.1| Cadherin-87A [Acromyrmex echinatior]
          Length = 1629

 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 70/241 (29%), Positives = 106/241 (43%), Gaps = 44/241 (18%)

Query: 11  ITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTN 70
           I LVV    + N    + AT+ +S    +     F    Y+ +  E       ++T+T  
Sbjct: 264 IILVVAEEVHTNPKLSSTATVTISITDANDNAPSFGSPTYTATVSETAAPGSPIITITA- 322

Query: 71  KPRD------LRVKYWLSNDYGERFSISRQ-GDISLMQC--------LDYETEDSYRFTV 115
           K RD        + Y L     E F+I ++ G I++  C        LDYE +  Y  T 
Sbjct: 323 KDRDSGRFGTAGIVYQLLGQGAEHFAIDKKTGTITVAPCPTPGTSPCLDYEQQTEYFLTY 382

Query: 116 YATD---TLMTTSATVNISVVNVNDWDPRFRYPQY--------ELFLPHIPLADLTPGSV 164
            ATD      TTS ++ IS+V+ ND  PRF   +Y        E F P +          
Sbjct: 383 KATDDNGEGQTTSVSLRISLVDANDSPPRFLQDKYRAVVDEGAEKFEPEL---------- 432

Query: 165 IGKVEAADGDKGDRVTLSLRGPYE-KMFSIN-DSGHISI---VDLSALNTSTIQLVVVAT 219
             KV+A D DK  ++T +L G  E  +FS++ D+G I+I   VD++      I L + A+
Sbjct: 433 --KVQARDKDKTSKITYALVGGNELGLFSVDPDTGEITIKSPVDMTNATHDWIGLTIQAS 490

Query: 220 D 220
           D
Sbjct: 491 D 491



 Score = 62.0 bits (149), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 49/153 (32%), Positives = 83/153 (54%), Gaps = 15/153 (9%)

Query: 95  GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFL 151
           G +   Q +DYE      FTV A D+    ++T+A V ++V+NVND DP+F   + EL+ 
Sbjct: 795 GIVRTSQVIDYEETKQLEFTVVAYDSGVPQLSTTAKVTVTVINVNDQDPKF---EKELYN 851

Query: 152 PHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSI-NDSGHISIVDLSALN 208
             +   +  PG+ +  V+A DGD+G    V+ SL G +   F+I +++G I++   + L+
Sbjct: 852 ASVK-ENSPPGTRVIVVKATDGDEGPFGDVSYSLIGEHAADFNIGHETGEITVGGATVLD 910

Query: 209 ---TSTIQLVVVATDTG--NPPRQASVPAIMHF 236
              T  I + V+A+D    N  R  +VP ++  
Sbjct: 911 REVTPEITITVMASDGAHINSRRSTTVPVVVKL 943



 Score = 46.2 bits (108), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 57/199 (28%), Positives = 88/199 (44%), Gaps = 19/199 (9%)

Query: 45   FSKNEYSVSALENLPVNY---VLLTVTTNKPRDLRVKYW---LSNDYGERFSISRQGDIS 98
            FS++ Y  S  ENL VN    +L     ++   +  + W   ++ +  E FS++R+  I 
Sbjct: 953  FSQHSYRASVAENLSVNPPAPILQVRAADQDEGINGEVWYTIINGNENESFSLNRETGIL 1012

Query: 99   LMQCLDYETEDSYRFTVYATDTL----MTTSATVNISVVNVNDWDPRFRYPQYELFLPHI 154
                       SYR  V A D       +    V+I V  VN   P+F  P+       +
Sbjct: 1013 YPAAALLGRAGSYRIEVEARDGAGSGPHSDRCYVDIRVTPVNQHKPQFVMPELTNATVEV 1072

Query: 155  PLADLTPGSVIGKVEAADGDKGD--RVTLSL----RGPYE-KMFSIN-DSGHI-SIVDLS 205
            P     P  +I  V+A D D G+  RV+  L    R   E + FSI+ ++G + S + L 
Sbjct: 1073 PENAGVPNYLILTVKAIDRDPGENGRVSYHLKIGNRNVQETEEFSIDQETGELRSKIILD 1132

Query: 206  ALNTSTIQLVVVATDTGNP 224
                S  +LV+VA D G+P
Sbjct: 1133 REIKSKFELVLVAADHGSP 1151



 Score = 45.8 bits (107), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 42/138 (30%), Positives = 69/138 (50%), Gaps = 14/138 (10%)

Query: 95  GDISLMQCLDY--ETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLP 152
           G+I++   +D    T D    T+ A+D +   SA VNI+V +VN+  P F +  Y     
Sbjct: 465 GEITIKSPVDMTNATHDWIGLTIQASDGIFVDSALVNITVRDVNNNAPMFPHDIYTA--- 521

Query: 153 HIPLADLTP-GSVIGKVEAADGDKGDRVTLSLR---GPYEKMFSINDSGHISIVD--LSA 206
              +A+++P G+V+ +V A D D G    L  R   G ++  F+IN++  +  V   L  
Sbjct: 522 --SIAEISPIGTVVEEVTATDADSGVNAELVYRIQKGAFDD-FTINETTGVVTVSRKLDY 578

Query: 207 LNTSTIQLVVVATDTGNP 224
              +T  + V+A D G P
Sbjct: 579 DEKNTYHVEVIAFDKGTP 596


>gi|156383896|ref|XP_001633068.1| predicted protein [Nematostella vectensis]
 gi|156220133|gb|EDO41005.1| predicted protein [Nematostella vectensis]
          Length = 1610

 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 62/196 (31%), Positives = 98/196 (50%), Gaps = 21/196 (10%)

Query: 51   SVSALENLPVNYVLLTVTTNKPRDL---RVKYWLSNDYGERFSIS-RQGDISLMQCLDYE 106
            +V  LENLP  + ++ V T  P ++   RV+Y L++D    F +    G I+  + LD E
Sbjct: 975  TVRLLENLPAGHFVVKVVTTDPDEVHNGRVEYNLTSD---AFRVDPFTGIITTTRALDRE 1031

Query: 107  TEDSYRFTVYATDTL---MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTP-G 162
            +  +Y   V A ++    M  + +V++ V++ ND  P F   +Y +  P     + TP G
Sbjct: 1032 SIPAYNLMVTARNSNSSDMEVNCSVHVIVMDTNDHTPSFTMARYYISTP-----ETTPVG 1086

Query: 163  SVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIN-DSGHISIV-DLSALNTSTIQLVVVA 218
            S + +V A DGD G    V  +L G  E +F IN  +G +++V  L   N +  QL V A
Sbjct: 1087 STLFRVRAVDGDDGINAEVRYTLMGE-ESLFRINYTTGIVTLVSSLDRENKAQYQLEVEA 1145

Query: 219  TDTGNPPRQASVPAIM 234
             D G P   A+   I+
Sbjct: 1146 RDRGIPESNANSTTIL 1161



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 49/150 (32%), Positives = 71/150 (47%), Gaps = 13/150 (8%)

Query: 89   FSIS-RQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRF-R 143
            F+I+ + G I  +  LD ET D Y  TV A+D     M +S  V I V +VND  P    
Sbjct: 1221 FAINNKSGSIYTLLHLDRETTDRYILTVLASDRGEPAMNSSTNVTIHVNDVNDNKPNITN 1280

Query: 144  YPQYELFLPHIPLADLTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSINDSGHISI 201
             P   +   + P     PGS++  + A+D D+G   RV  S     +  FSI  +G I +
Sbjct: 1281 NPGVVVTRENTP-----PGSLVYILSASDLDEGSNARVAFSGYAVPDGKFSIKPNGEIMV 1335

Query: 202  VD-LSALNTSTIQLVVVATDTGNPPRQASV 230
             D L     +      +ATD+G PP  +S+
Sbjct: 1336 RDSLDREAQNRFVFYAMATDSGQPPFNSSM 1365



 Score = 47.4 bits (111), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 46/178 (25%), Positives = 84/178 (47%), Gaps = 15/178 (8%)

Query: 68  TTNKPRDLRVKYWLSNDYGERFSISRQ-GDISLMQCLDYETEDSYRFTVYATDTL----M 122
           ++N P   +++Y L N  G  F+I +  G +  +  LD E   +Y F+V A D++    +
Sbjct: 786 SSNCPLCGKLQYTLGNSTGP-FAIDKDTGVLRAVGSLDREGIKNYTFSVIAQDSIPNRPL 844

Query: 123 TTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS 182
                V +++++VND DP F    Y   +      D +PG  + K+ A D D      +S
Sbjct: 845 VNVTMVTVNLLDVNDNDPVFDRDVYTANVSE----DASPGLTVLKIRAVDNDLASNANVS 900

Query: 183 ---LRGPYEKMFSIND-SGHISIVD-LSALNTSTIQLVVVATDTGNPPRQASVPAIMH 235
              + G     F +++ +G I +V  L     ++  L V + D G  PR+++   I++
Sbjct: 901 YSIVSGNTGAAFHVDNVTGEIKLVSKLEREKITSYTLTVGSADGGAVPRRSTALVIIY 958



 Score = 44.3 bits (103), Expect = 0.099,   Method: Compositional matrix adjust.
 Identities = 46/164 (28%), Positives = 76/164 (46%), Gaps = 19/164 (11%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKP---RDLRVKYWLSND---YGERFSI-SRQGDI 97
           FS+  YS    EN P    ++ V+ N      +  V Y + +D   + + F I ++ G I
Sbjct: 429 FSRALYSSPIYENEPPGTFVIQVSANDSDIGSNAMVSYAVLSDAEGHYQYFKINAKNGTI 488

Query: 98  SLMQCLDYETEDSYRFTVYATD-----TLMTTSATVNISVVNVNDWDPRFRYPQYELFLP 152
           +  + LD E   ++R  V A+D     T+  +   V ++V+++ND  P F  P Y   + 
Sbjct: 489 TTSRRLDRENITTFRLRVTASDGAPLSTIRVSVVDVVVTVLDINDNSPEFVRPSYNFSVI 548

Query: 153 HIPLADLTPGSVIGKVEAADGDK---GDRVTLSLRGPYEKMFSI 193
              L    PG+++G + A D DK   G+ V +   G  E  F I
Sbjct: 549 ETAL----PGAILGIISAVDRDKDLNGNIVYIITEGNVEGSFII 588



 Score = 42.0 bits (97), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 40/140 (28%), Positives = 65/140 (46%), Gaps = 10/140 (7%)

Query: 43  LQFSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYG--ERFSISR-QGD 96
           ++F+   YS S  EN  +  V++ V     +K  +  V Y +  +      F+I+   G+
Sbjct: 220 VRFNNYSYSASIPENAAMGSVVMQVHAKDLDKSINAPVTYAIDKETNPLRMFNIANITGE 279

Query: 97  ISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
           I+L   LD ET   YR  + A  T+      V I+V +VND  P F  P Y   +     
Sbjct: 280 ITLNGSLDRETIAEYRLRILAYCTIYQDHTEVLITVTDVNDNIPLFTLPSYNTTVNE--- 336

Query: 157 ADLTPGSVIGKVEAADGDKG 176
            +   G+ + +V+A D D+G
Sbjct: 337 -NAAIGTYVIQVQAEDIDQG 355



 Score = 39.3 bits (90), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 58/204 (28%), Positives = 85/204 (41%), Gaps = 19/204 (9%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWLSNDYGER--FSIS-RQGDIS 98
            F+   Y +S  E  PV   L  V      D     V+Y L    GE   F I+   G ++
Sbjct: 1070 FTMARYYISTPETTPVGSTLFRVRAVDGDDGINAEVRYTL---MGEESLFRINYTTGIVT 1126

Query: 99   LMQCLDYETEDSYRFTVYATDTLM----TTSATVNISVVNVNDWDPRFRYPQYEL-FLPH 153
            L+  LD E +  Y+  V A D  +      S T+ I V +VND  P F +  Y+   L  
Sbjct: 1127 LVSSLDRENKAQYQLEVEARDRGIPESNANSTTILIRVGDVNDNRPTFTHAHYDGNVLEG 1186

Query: 154  IPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSIND-SGHI-SIVDLSALNTST 211
               A       + K E  + D    V   + G  +  F+IN+ SG I +++ L    T  
Sbjct: 1187 QVGAVAAIVVALDKDEEINADI---VYSIIGGNTDNSFAINNKSGSIYTLLHLDRETTDR 1243

Query: 212  IQLVVVATDTGNPPRQASVPAIMH 235
              L V+A+D G P   +S    +H
Sbjct: 1244 YILTVLASDRGEPAMNSSTNVTIH 1267



 Score = 38.5 bits (88), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 41/148 (27%), Positives = 67/148 (45%), Gaps = 12/148 (8%)

Query: 88   RFSISRQGDISLMQCLDYETEDSYRFTVYATDT----LMTTSATVNISVVNVNDWDPRFR 143
            +FSI   G+I +   LD E ++ + F   ATD+      ++  + +I + + ND +P F 
Sbjct: 1324 KFSIKPNGEIMVRDSLDREAQNRFVFYAMATDSGQPPFNSSMVSFDILIADENDNNPVFD 1383

Query: 144  YPQYELFLPHIPLADLTPG-SVIGKVEAADGDKGDRVTLSLRGPYEKMFSI-NDSGHISI 201
               Y      + +++  P   VI +V A++ D+G  +     G     F+I N +G IS 
Sbjct: 1384 PVHYS-----VNISENGPSEEVIVQVNASERDEGKLLFKISSGDPGGYFTIHNVTGVIST 1438

Query: 202  VD-LSALNTSTIQLVVVATDTGNPPRQA 228
               L     S   L + A D G P R A
Sbjct: 1439 RKPLDREMVSRFDLTITAEDEGRPSRMA 1466


>gi|332237932|ref|XP_003268160.1| PREDICTED: LOW QUALITY PROTEIN: cadherin EGF LAG seven-pass G-type
           receptor 2 [Nomascus leucogenys]
          Length = 2871

 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 70/219 (31%), Positives = 98/219 (44%), Gaps = 22/219 (10%)

Query: 25  RYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWL 81
           R ALATL +    T+  +  F + EY  S  ENL V Y +LTV     + P +  + Y L
Sbjct: 276 RSALATLTILVTDTNDHDPVFEQQEYKESLRENLEVGYEVLTVRATDGDAPPNANILYRL 335

Query: 82  SNDYG----ERFSIS-RQGDISLMQCLDYETEDSYRFTVYATDT-----LMTTSATVNIS 131
               G    E F I  R G I     +D E  +SY+ TV A+D        +T+A V +S
Sbjct: 336 LEGSGGSPSEVFEIDPRSGVIRTRGPVDREEVESYQLTVEASDQGRDPGPRSTTAAVFLS 395

Query: 132 VVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYE 188
           V + ND  P+F     E         D+TPG  + +V A+D DKG    +    + G   
Sbjct: 396 VEDDNDNAPQFS----EKXXXXQVREDVTPGXPVLRVTASDRDKGSNALVHYSIMSGNAR 451

Query: 189 KMFSIN-DSGHISIVD-LSALNTSTIQLVVVATDTGNPP 225
             F ++  +G + +V  L    T    L V A D G PP
Sbjct: 452 GQFYLDAQTGALDVVSPLDYETTKEYTLRVRAQDGGRPP 490



 Score = 52.4 bits (124), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 50/171 (29%), Positives = 80/171 (46%), Gaps = 15/171 (8%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGERFSIS---RQGDIS 98
           F    +  + LE++P+ Y++L V     +   + R++Y L+   G  F  +     G IS
Sbjct: 512 FVSTPFQATVLESVPLGYLVLHVQAIDADAGDNARLEYRLAG-VGHDFPFTINNGTGWIS 570

Query: 99  LMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIP 155
           +   LD E  D Y F V A D     +T SA+V+++V++VND +P F  P+Y + L    
Sbjct: 571 VAAELDREEVDFYSFGVEARDHGTPALTASASVSVTVLDVNDNNPTFTQPEYTVRLNE-- 628

Query: 156 LADLTPGSVIGKVEAADGDKGDRVTLSL-RGPYEKMFSINDSGHISIVDLS 205
             D   G+ +  V A D D    +T  +  G     FSI       +V L+
Sbjct: 629 --DAAVGTSVVTVSAVDRDAHSVITYQITSGNTRNRFSITSQSGGGLVSLA 677



 Score = 44.7 bits (104), Expect = 0.086,   Method: Compositional matrix adjust.
 Identities = 50/189 (26%), Positives = 86/189 (45%), Gaps = 14/189 (7%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRDLR--VKYWL-SNDYGERFSISRQ---GDIS 98
           F++ EY+V   E+  V   ++TV+    RD    + Y + S +   RFSI+ Q   G +S
Sbjct: 617 FTQPEYTVRLNEDAAVGTSVVTVSAVD-RDAHSVITYQITSGNTRNRFSITSQSGGGLVS 675

Query: 99  LMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLAD 158
           L   LDY+ E  Y   V A+D     +A + ++V + N   P F+   Y + +      D
Sbjct: 676 LALPLDYKLERQYVLAVTASDGTRQDTAQIVVNVTDANTHRPVFQSSHYTVNVNE----D 731

Query: 159 LTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSINDSGHISI-VDLSALNTSTIQLV 215
              G+ +  + A D D G+  R+T  +     +     D+G ++   +L   +  +  L 
Sbjct: 732 RPAGTTVVLISATDEDTGENARITYFMEDSIPQFRIDADTGAVTTQAELDYEDQVSYTLA 791

Query: 216 VVATDTGNP 224
           + A D G P
Sbjct: 792 ITARDNGIP 800



 Score = 44.3 bits (103), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 40/149 (26%), Positives = 69/149 (46%), Gaps = 10/149 (6%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWL-SNDYGERFSIS-RQGDISL 99
            F ++E+ V   EN P+   +  VT   P +    ++ Y +   +  E F +    G+++ 
Sbjct: 928  FEQDEFDVFVEENSPIGLAVARVTATDPDEGTNAQIMYQIVEGNIPEVFQLDIFSGELTA 987

Query: 100  MQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPH--IPLA 157
            +  LDYE    Y   + AT   + + ATV++ +++ ND  P      +E+   +     +
Sbjct: 988  LVDLDYEDRPEYILVIQATSAPLVSRATVHVRLLDRNDNPPVLG--NFEILFNNYVTNRS 1045

Query: 158  DLTPGSVIGKVEAADGDKGDRVTLSL-RG 185
               PG  IG+V A D D  D +T S  RG
Sbjct: 1046 SSFPGGAIGRVPAHDPDISDSLTYSFERG 1074


>gi|348525438|ref|XP_003450229.1| PREDICTED: protocadherin-16-like [Oreochromis niloticus]
          Length = 3282

 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 63/188 (33%), Positives = 92/188 (48%), Gaps = 16/188 (8%)

Query: 56   ENLP----VNYVLLTVTTNKPRDLRVKYWLSNDYGERFSI-SRQGDISLMQCLDYETEDS 110
            ENLP      +VL T   + P       +L  D    F I +  G+IS    LD E + S
Sbjct: 1121 ENLPPGTGFGHVLATDRDSGPNGRPAYRFLHPD--RHFQINTHTGEISTRMTLDREQQSS 1178

Query: 111  YRFTVYATDTL---MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTP-GSVIG 166
            Y+  V A D      + + T  I+V++ ND DP F + Q    +  I + +  P G V+G
Sbjct: 1179 YQLVVVAQDGGSPPRSATGTAFITVLDENDNDPVFIHSQSGKNI-IIQVTEGQPSGVVLG 1237

Query: 167  KVEAADGDKGDRVTL--SLRGPYEKMFSIN-DSGHI-SIVDLSALNTSTIQLVVVATDTG 222
             ++A D D+G+  T+  SL GP  + FS+N ++G + S   LS    +   L+V ATD G
Sbjct: 1238 TLQAKDPDEGENGTIFYSLSGPRAERFSLNTNTGELRSSSPLSHSERAEYTLMVTATDRG 1297

Query: 223  NPPRQASV 230
             PPR  S 
Sbjct: 1298 LPPRSTSC 1305



 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 58/188 (30%), Positives = 93/188 (49%), Gaps = 14/188 (7%)

Query: 51   SVSALENLPVNYVLLTVTT---NKPRDLRVKYWL-SNDYGERFSIS-RQGDISLMQCLDY 105
            +VS +E+ PV +V+L V     ++  + RV Y + S +    FS++   G +S+ + LD 
Sbjct: 1544 AVSVMEDQPVGFVVLYVMARDADQGENGRVTYRIQSGNTAGTFSLNPSTGSLSIFKPLDR 1603

Query: 106  ETEDSYRFTVYATDTLMTTSATVN---ISVVNVNDWDPRFRYPQYELFLPHIPLADLTPG 162
            E +D +  TV A D  +   +++    + V++VND  P F   QYE+ +      +  PG
Sbjct: 1604 EEQDIFNLTVIAEDHGIPQHSSIQLLCVHVIDVNDEVPWFEQSQYEVEISE----NQPPG 1659

Query: 163  SVIGKVEAADGDKGDRVTLSLRGPYEKMFSIND-SGHISIV-DLSALNTSTIQLVVVATD 220
            + +  V AAD D+G    ++  G  ++ FSIN  SG I I   L         + V A D
Sbjct: 1660 TSVLTVSAADLDQGSNGQVTYDGISQEGFSINPVSGVIMITKSLDRELQEYYTVTVSAKD 1719

Query: 221  TGNPPRQA 228
             G PP  A
Sbjct: 1720 GGLPPNYA 1727



 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 54/147 (36%), Positives = 73/147 (49%), Gaps = 11/147 (7%)

Query: 95   GDISLMQCLDYETEDSYRFTVYAT----DTLMTTSATVNISVVNVNDWDPRFRYPQYELF 150
            G + +   LD E +D Y  TV A+        T SATV ISV + ND  PR    Q  +F
Sbjct: 1059 GWLFVKSALDREVKDMYLLTVLASTGHGQLKKTGSATVRISVTDENDNSPRLT--QERVF 1116

Query: 151  LPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPY-EKMFSIN-DSGHISI-VDLSAL 207
            +      +L PG+  G V A D D G     + R  + ++ F IN  +G IS  + L   
Sbjct: 1117 M--AVRENLPPGTGFGHVLATDRDSGPNGRPAYRFLHPDRHFQINTHTGEISTRMTLDRE 1174

Query: 208  NTSTIQLVVVATDTGNPPRQASVPAIM 234
              S+ QLVVVA D G+PPR A+  A +
Sbjct: 1175 QQSSYQLVVVAQDGGSPPRSATGTAFI 1201



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 45/139 (32%), Positives = 65/139 (46%), Gaps = 16/139 (11%)

Query: 97  ISLMQCLDYETEDSYRFTVYATDTL---MTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
           I + Q LD E  D+Y   V ATD+    +   ++  I V+++ND  P F  P Y   +P 
Sbjct: 424 ICVDQILDREERDTYELRVMATDSGTPPLRAESSFTIQVIDINDNPPLFDQPVYRQVIPE 483

Query: 154 IPLADLTPGSVIGKVEAADGDKGDRVTLSLR-----GPYEKMFSINDSGHISIVDLSALN 208
           +    + PGS + +V A D D+G    +S         Y   FSI+    I I  LS L+
Sbjct: 484 V----VFPGSFVLQVTARDKDQGPNGDISYSILQDGSAYYSWFSIDSITGI-ITTLSQLD 538

Query: 209 ---TSTIQLVVVATDTGNP 224
                +  + VVATD G P
Sbjct: 539 YEKNPSPSITVVATDGGKP 557



 Score = 51.2 bits (121), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 53/199 (26%), Positives = 89/199 (44%), Gaps = 16/199 (8%)

Query: 13   LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNY---VLLTVTT 69
            +VV+A   D Q  +ALA + +     +     F  N  + S  EN P N    +L  +  
Sbjct: 2661 IVVQAT--DGQGHFALAPVSIEVKDINDNRPFFPLNLVTASIRENQPQNALVTMLHAIDH 2718

Query: 70   NKPRDLRVKYWLSNDYGER----FSISRQGDISLMQCLDYETEDSYRFTVYATDTL-MTT 124
            ++    +++Y++ + + E     F     G+I      D+E  +S++F   A D    + 
Sbjct: 2719 DRGVFGQLRYYMLDSFKEGKEGFFINHTSGEIRTRSSFDFEKLNSFQFMAMAVDAGNYSA 2778

Query: 125  SATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG-DRVTLSL 183
            + TV + V   +++DP F   ++   +P         G VIGKV+A D D G D V L  
Sbjct: 2779 TVTVKVYVTGEDEYDPVFTSSEFLFEVPE----GAKKGQVIGKVQARDEDGGVDGVVLYS 2834

Query: 184  RGPYEKMFSINDS-GHISI 201
               +   F +N S G IS+
Sbjct: 2835 LPDHSPYFEVNKSTGEISL 2853



 Score = 51.2 bits (121), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 60/210 (28%), Positives = 97/210 (46%), Gaps = 22/210 (10%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTTNKPRDL------RVKYWLSNDYGERFSISRQ-GD 96
            QF  + Y+   LE++P+  ++L V   K  DL      +V Y+LS+     F I +  G 
Sbjct: 1848 QFQSSSYTAEILEDVPIGSLVLEV---KAIDLDHGPNSQVLYFLSHGSQSMFMIDQNTGR 1904

Query: 97   ISLMQCLDYETEDSYRFTVYATDTL----MTTSATVNISVVNVNDWDPRFRYPQYELFLP 152
            I     LD E   SY F V ATD+       ++A V I + +VND  P F     +  + 
Sbjct: 1905 IITASPLDRERTASYTFEVCATDSSPANPRNSTAQVTIYIQDVNDNAPFF---IQDPLIV 1961

Query: 153  HIPLADLTPGSVIGKVEAADGDKGDRVTLSLR--GPYEKMFSIND-SGHISIVD-LSALN 208
            ++  + ++   V+  + A D D G   ++  R   P  + F+IN  +G I   + L  + 
Sbjct: 1962 NVSASSVSNRRVLATMRAEDKDFGANGSVFYRFANPV-RGFTINSLTGEIQATEKLQTMT 2020

Query: 209  TSTIQLVVVATDTGNPPRQASVPAIMHFPE 238
             S   L+V A D GNP + +    I++  E
Sbjct: 2021 QSQRTLIVQAMDQGNPAQSSLGVVIIYIKE 2050



 Score = 47.8 bits (112), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 60/224 (26%), Positives = 100/224 (44%), Gaps = 15/224 (6%)

Query: 12   TLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNK 71
            TL+V+A+   N  + +L  +I+     S   ++FS+    VS  EN     V+       
Sbjct: 2025 TLIVQAMDQGNPAQSSLGVVIIYIKEQSYSGIRFSRTARDVSLQENAAKGTVVTQAQAQY 2084

Query: 72   PRDLR--VKYWL-SNDYGERFSISR-QGDISLMQC--LDYETEDSYRFTVYATDTLMTTS 125
            P   +  + Y + S +  + F I+   G+I + +   LD+E     R  V A     ++ 
Sbjct: 2085 PDGSKNGITYSIFSGNKLQSFGINTITGEIWVQKSEGLDFEETPKLRLVVKAETASSSSY 2144

Query: 126  ATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGD--RVTLSL 183
              VN+ + +VND  PRF+   Y  ++      D      I +V A D D+G   +VT S+
Sbjct: 2145 MAVNLILQDVNDNLPRFQLQNYVAYIREAQGYDFP----IIQVAADDRDQGQNGQVTYSI 2200

Query: 184  R-GPYEKMFSIND-SGHISIVDLSALNTST-IQLVVVATDTGNP 224
            R      +F I+  +G ++   +      T  +LVV ATD G P
Sbjct: 2201 RSSSMSGLFKIDPLTGSVTTAAIMDREIWTQTKLVVTATDRGTP 2244



 Score = 47.8 bits (112), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 60/213 (28%), Positives = 100/213 (46%), Gaps = 19/213 (8%)

Query: 26   YALATLIVSKAGTSLRELQFSKNEYSVSA---LENLPVNYVLLTVTTNKPRDLRVKYWL- 81
            YA AT+ +     +     F +  YS+     LE LP+ + L     +   + R+ Y + 
Sbjct: 1726 YAKATVRIKVTDVNDNPPVFGRLYYSIEVPENLEALPL-FTLRATDQDAGDNGRINYKIT 1784

Query: 82   SNDYGERFSISRQ-GDISLMQCLDYETEDSYRFTVYATDTL---MTTSATVNISVVNVND 137
            + D    F +  Q G +S  + LD E    Y  TV A D     ++++ATV + V+++ND
Sbjct: 1785 AGDPSGDFRLDGQSGVLSTSRPLDREKRPGYSLTVIAQDQGHPPLSSTATVEVIVLDIND 1844

Query: 138  WDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIN- 194
              P+F+   Y   +    L D+  GS++ +V+A D D G   +V   L    + MF I+ 
Sbjct: 1845 HSPQFQSSSYTAEI----LEDVPIGSLVLEVKAIDLDHGPNSQVLYFLSHGSQSMFMIDQ 1900

Query: 195  DSGH-ISIVDLSALNTSTIQLVVVATDT--GNP 224
            ++G  I+   L    T++    V ATD+   NP
Sbjct: 1901 NTGRIITASPLDRERTASYTFEVCATDSSPANP 1933



 Score = 45.8 bits (107), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 33/98 (33%), Positives = 48/98 (48%), Gaps = 7/98 (7%)

Query: 89   FSISR-QGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQY 147
            F I R  G +SL   LDYE    Y  TV ++D+   + A + + V +VND  P F    Y
Sbjct: 2312 FGIHRYGGGVSLTGPLDYEERTWYTLTVRSSDSKHQSEANLTVLVDDVNDNSPTFTQDLY 2371

Query: 148  ELFL-PHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR 184
            ++ +  H+P      GS +  V A D D GD   ++ R
Sbjct: 2372 QVAVSEHLPA-----GSAVITVTATDRDSGDNGKITYR 2404



 Score = 43.1 bits (100), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 41/128 (32%), Positives = 63/128 (49%), Gaps = 13/128 (10%)

Query: 58  LPVNYVLLTVTTNKPR--DLRVKYWLSND---YGERFSI-SRQGDISLMQCLDYETEDSY 111
            P ++VL     +K +  +  + Y +  D   Y   FSI S  G I+ +  LDYE   S 
Sbjct: 486 FPGSFVLQVTARDKDQGPNGDISYSILQDGSAYYSWFSIDSITGIITTLSQLDYEKNPSP 545

Query: 112 RFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKV 168
             TV ATD     ++++A VNI + ++ND +P F    Y + +      +  PG+ I +V
Sbjct: 546 SITVVATDGGKPSLSSTAVVNIFLQDINDNEPVFERNFYNVSIEE----NTGPGTCILEV 601

Query: 169 EAADGDKG 176
            AAD D G
Sbjct: 602 TAADADSG 609



 Score = 43.1 bits (100), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 60/203 (29%), Positives = 89/203 (43%), Gaps = 39/203 (19%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKY-WLSNDYGERFSISR-QGDISL 99
            F +++Y V   EN P    +LTV+    ++  + +V Y  +S    E FSI+   G I +
Sbjct: 1643 FEQSQYEVEISENQPPGTSVLTVSAADLDQGSNGQVTYDGISQ---EGFSINPVSGVIMI 1699

Query: 100  MQCLDYETEDSYRFTVYATDTLMT---TSATVNISVVNVNDWDPRFRYPQYELFLPH--- 153
             + LD E ++ Y  TV A D  +      ATV I V +VND  P F    Y + +P    
Sbjct: 1700 TKSLDRELQEYYTVTVSAKDGGLPPNYAKATVRIKVTDVNDNPPVFGRLYYSIEVPENLE 1759

Query: 154  -IPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSGHISIVDLSA-LNTST 211
             +PL  L          A D D GD   ++      K+ + + SG   +   S  L+TS 
Sbjct: 1760 ALPLFTL---------RATDQDAGDNGRINY-----KITAGDPSGDFRLDGQSGVLSTSR 1805

Query: 212  ---------IQLVVVATDTGNPP 225
                       L V+A D G+PP
Sbjct: 1806 PLDREKRPGYSLTVIAQDQGHPP 1828



 Score = 40.8 bits (94), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 48/151 (31%), Positives = 67/151 (44%), Gaps = 19/151 (12%)

Query: 92  SRQGDISLMQCLDYETEDSYRFTVYATDTLM---TTSATVNISVVNVNDWDPRFRYPQYE 148
           SR G I+L + LD+E    +   V A D       T+A V I V + ND  P        
Sbjct: 309 SRTGIITLNKPLDFEMRRVHELVVQAQDNATHPEVTNAFVTIHVRDYNDNQPTMTI---- 364

Query: 149 LFL-----PHIPLADLTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKM-FSINDSG-HI 199
           +FL     P I      PG  + ++   D D G+   V +SL G   K   +  DS  ++
Sbjct: 365 IFLSEDGSPRISEG-AQPGQYVARISVTDPDYGEYANVNVSLEGGDGKFALTTKDSIIYL 423

Query: 200 SIVD--LSALNTSTIQLVVVATDTGNPPRQA 228
             VD  L      T +L V+ATD+G PP +A
Sbjct: 424 ICVDQILDREERDTYELRVMATDSGTPPLRA 454



 Score = 40.0 bits (92), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 66/254 (25%), Positives = 102/254 (40%), Gaps = 34/254 (13%)

Query: 12   TLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNK 71
            TL VR+    +Q    L  L+      S     F+++ Y V+  E+LP    ++TVT   
Sbjct: 2336 TLTVRSSDSKHQSEANLTVLVDDVNDNSP---TFTQDLYQVAVSEHLPAGSAVITVTATD 2392

Query: 72   PRDL----RVKYW-LSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDTLMTTS- 125
             RD     ++ Y  +S+  G  +     G +   Q  +++ E+     V       T S 
Sbjct: 2393 -RDSGDNGKITYRVMSSTKGVFYIDPVNGTLFTKQKTEFDFENPSILVVIEARDQGTPSL 2451

Query: 126  ---ATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDK-GDRVTL 181
               ATV++ V ++ND  P F   +Y   +      D  PGS +  +EA DGD   D    
Sbjct: 2452 SAIATVHVQVSDINDNAPIFHQSEYRATVSE----DGLPGSTVLILEAVDGDLLRDNCGF 2507

Query: 182  SL---RGPYEKMFSINDS------------GHISIVD-LSALNTSTIQLVVVATDTGNPP 225
                  G     F I  S            G + +V+ L      +  L VV +D G P 
Sbjct: 2508 DFAIASGNSGNAFQIESSVRFLEGRGFQTVGSLILVEKLDFEAVPSYNLTVVVSDRGIPQ 2567

Query: 226  RQASVPAIMHFPEA 239
            R +SVP I+   +A
Sbjct: 2568 RSSSVPIIISVTDA 2581


>gi|336244979|gb|AEI28407.1| FAT tumor suppressor-like protein 4, partial [Pelodiscus sinensis]
          Length = 254

 Score = 62.0 bits (149), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 51/191 (26%), Positives = 97/191 (50%), Gaps = 10/191 (5%)

Query: 45  FSKNEYSVSALENLPVNYVLLTV-TTNKPRDLRVKYWLS-NDYGERFSISR-QGDISLMQ 101
           F++  YS    EN+ + Y + TV  +    +  + Y ++  D    F+I++  G I+   
Sbjct: 4   FNQGAYSFVVFENVALGYHVGTVFASTMDLNTNITYLITTGDQRGMFAINKVTGQITTAS 63

Query: 102 CLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTP 161
            +D E +  Y+  V A+   +T  + VNI+V ++ND  P F +    + +    + +   
Sbjct: 64  IIDREEQAFYQLKVVASGGAITGDSLVNITVKDLNDNSPHFLHAVESVNV----VENWKA 119

Query: 162 GSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIND-SGHISIVDLSALNTSTIQLVVVA 218
           G  I + +A D D+G    V  SL+   + +F+IN+ +G IS++    +N  + Q+ ++A
Sbjct: 120 GHTIFQAKAVDPDEGVNGMVIYSLKQNPKGLFTINEQNGAISLIGPLDINAGSYQVEILA 179

Query: 219 TDTGNPPRQAS 229
           +D G P R +S
Sbjct: 180 SDMGVPQRSSS 190


>gi|170032325|ref|XP_001844032.1| conserved hypothetical protein [Culex quinquefasciatus]
 gi|167872318|gb|EDS35701.1| conserved hypothetical protein [Culex quinquefasciatus]
          Length = 644

 Score = 62.0 bits (149), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 59/184 (32%), Positives = 88/184 (47%), Gaps = 17/184 (9%)

Query: 50  YSVSALENLPVNYVLLTVTTNKPRDL-RVKYWLSNDYGERFSISRQ-GDISLMQCLDYET 107
           +SVS  E+L V  ++  +T   P  L  ++Y L      +F + +  G + L   LD ET
Sbjct: 27  FSVS--EDLAVGQLVAQITATDPDTLGTLEYSLVKGTTGKFQLEKDTGRLRLRDTLDRET 84

Query: 108 EDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGK 167
           ED+YR  V  TD + +T  T+ I V + ND  P F  P Y   +P     +   G  +G 
Sbjct: 85  EDTYRLVVSVTDGVQSTETTITIQVTDTNDNPPTFAEPAYSFDIPE----NAARGFQVGV 140

Query: 168 VEAADGDKGDR--VTLSLRGPY-EKMFSINDSGHISIVDLSA-LNTSTIQ---LVVVATD 220
           + A D D G    VT ++   +   +FS+N      I  L+A L+   +Q   LVV A D
Sbjct: 141 IAATDPDLGANADVTYTVISDWANDVFSLN--PQTGIFTLTARLDYEEVQHYILVVQAQD 198

Query: 221 TGNP 224
            G+P
Sbjct: 199 NGHP 202



 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 58/205 (28%), Positives = 93/205 (45%), Gaps = 19/205 (9%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVT---TNKPRDLRVKYWL-SNDYGERFSISRQGDISLM 100
           F    YS    EN+P++  ++TV+   T+   + R++Y + S D  E F I   G I   
Sbjct: 224 FDPMSYSNEIFENVPISTDVVTVSATDTDSGINGRIEYSITSGDDNEDFQILSNGTIRTR 283

Query: 101 QCLDYETEDSYRFTVYATDTLMT----TSATVNISVV--NVNDWDPRFRYPQYELFLPHI 154
           + LD E++ SY   V A D         S+TV +++V  +VND  P F  P       +I
Sbjct: 284 RALDRESKSSYSLIVSARDCAKEPEKQLSSTVQVTIVLKDVNDLAPEFVTPNETSVAENI 343

Query: 155 PLADLTPGSVIGKVEAADGDKGDR--VTLSLRGPYEKMFSINDSGHISIVD--LSALNTS 210
           P+      +VI  ++A D D+G    V   L    +  F++  +  +  V   L     S
Sbjct: 344 PI-----NTVIMAIKAVDRDEGRNGYVEYQLDPAVQTPFTVGSADGLLRVSGRLDRETKS 398

Query: 211 TIQLVVVATDTGNPPRQASVPAIMH 235
           + +L V A D G PP+ +     +H
Sbjct: 399 SYELTVTAKDRGEPPKSSQSKIRIH 423



 Score = 45.1 bits (105), Expect = 0.059,   Method: Compositional matrix adjust.
 Identities = 49/166 (29%), Positives = 83/166 (50%), Gaps = 17/166 (10%)

Query: 48  NEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGERFSI-SRQGDISLMQCL 103
           NE SV+  EN+P+N V++ +     ++ R+  V+Y L       F++ S  G + +   L
Sbjct: 335 NETSVA--ENIPINTVIMAIKAVDRDEGRNGYVEYQLDPAVQTPFTVGSADGLLRVSGRL 392

Query: 104 DYETEDSYRFTVYATDTL---MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLT 160
           D ET+ SY  TV A D      ++ + + I V++ ND  P F   QY   +      + +
Sbjct: 393 DRETKSSYELTVTAKDRGEPPKSSQSKIRIHVLDENDNSPIFDPKQYSAAIAE----NAS 448

Query: 161 PGSVIGKVEAADGDKG--DRVTLSL-RGPYEKMFSIN-DSGHISIV 202
            G+ + +V A D D+G   RV  S+  G   + F+I+ DSG + + 
Sbjct: 449 IGASVLQVSATDIDEGANGRVRFSIAAGDDNRDFTISEDSGVVRVA 494


>gi|449269582|gb|EMC80343.1| Protocadherin Fat 3 [Columba livia]
          Length = 4549

 Score = 62.0 bits (149), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 62/197 (31%), Positives = 91/197 (46%), Gaps = 17/197 (8%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPR---DLRVKYWLSNDYGERFSISRQ-GDISLM 100
            FS + Y+    EN     +L  V    P    + +V Y L++     FS+ R  G I L 
Sbjct: 3132 FSSDHYTACVYENTATKALLTRVQATDPDVGVNRKVTYTLADSADGYFSVDRSSGIIILE 3191

Query: 101  QCLDYETEDSYRFTVYATDT----LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
              LD E + SY  +V A+D      +++ ATV I+V+++ND  P F    Y + +P    
Sbjct: 3192 HPLDRELQSSYNISVKASDQSIVLTLSSFATVTITVLDINDNPPVFERRDYLVTVPE--- 3248

Query: 157  ADLTPGSVIGKVEAADGDKGDRVTLS--LRGPYEK-MFSIND-SGHISIVD-LSALNTST 211
             D +PG+ +  V A   D G    ++  +R   EK  F IN  +G ISI + L   +   
Sbjct: 3249 -DTSPGTEVLSVFATSQDIGTNAEIAYLIRSGNEKGKFRINSKTGAISIFEALDYESCKD 3307

Query: 212  IQLVVVATDTGNPPRQA 228
              LVV A D G P   A
Sbjct: 3308 FYLVVEAKDGGTPALSA 3324



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 65/199 (32%), Positives = 92/199 (46%), Gaps = 25/199 (12%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDL----RVKYWLSNDYGERFSISR-QGDISL 99
            F  + Y+V  LE+LPV  V+  + T+ P DL    +V+Y L NDY  RF I +  G I L
Sbjct: 937  FIPSSYNVKVLEDLPVGTVIAWLETHDP-DLGLGGQVRYSLVNDYNGRFEIDKASGAIRL 995

Query: 100  MQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIP---- 155
             + LDYE +  Y  TV A D          +S+ +V+  +         L+ P+ P    
Sbjct: 996  NKELDYEKQQFYNLTVRAKDKGRP------VSLSSVSFVEVEVVDVNENLYTPYFPDFAV 1049

Query: 156  LADLTPGSVIG----KVEAADGDKG--DRVTLSLR-GPYEKMFSIN-DSGHISIVD-LSA 206
            +  +   S IG    +V A D D G    +  S+R G     FSI+ ++G I   D L  
Sbjct: 1050 IGSVKENSRIGTSVLQVVARDEDSGRDGEIQYSIRDGSGLGRFSIDEETGVIYTADILDR 1109

Query: 207  LNTSTIQLVVVATDTGNPP 225
              T +  L V ATD G  P
Sbjct: 1110 ETTKSYWLTVYATDHGVVP 1128



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 42/137 (30%), Positives = 60/137 (43%), Gaps = 8/137 (5%)

Query: 103  LDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPG 162
            LD E +D Y   + ATD L  T A V ++V +VND +P      Y    P     D+   
Sbjct: 2991 LDREEQDLYYLNITATDGLFVTQAAVEVTVTDVNDNNPVCEQVAYTALFPE----DIPSN 3046

Query: 163  SVIGKVEAADGDKGD--RVTLSLRGPYEKMFSIN-DSGHI-SIVDLSALNTSTIQLVVVA 218
             VI K+ A D D G    +  SL G     F ++ ++G + S+  L         LV  A
Sbjct: 3047 KVILKISAKDADIGSNGEIRYSLFGAGNNKFFLDPENGELKSLAPLDREKIPVYNLVARA 3106

Query: 219  TDTGNPPRQASVPAIMH 235
            TD G    Q+ +  I+ 
Sbjct: 3107 TDGGGRFCQSEIHLILE 3123



 Score = 45.8 bits (107), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 59/202 (29%), Positives = 88/202 (43%), Gaps = 25/202 (12%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWL-SNDYGERFSIS-RQGDISLMQC 102
            F K  Y+ S  E++ ++  +L++    P    + Y +   D   +F+I    G +S++  
Sbjct: 2187 FDKPFYTASVNEDVEMHTPILSINATSPEGQGIIYIIVDGDPYNQFNIDFDTGVLSVISP 2246

Query: 103  LDYETEDSYRFTVYATDTLMTTSA--TVNISVVNVNDWDPRFRYPQYELFLPHIPLADLT 160
            LDYE    ++  V A+D L    A  TV++ V +VND  P F    Y         A L+
Sbjct: 2247 LDYEINSLFKLMVRASDALTGARAEVTVDLIVNDVNDNPPLFDQSSYN--------ATLS 2298

Query: 161  PGSVIG----KVEAADGDKGDRVTLSLRGPYEKMFSINDSGHIS-----IVDLSALNTST 211
              S+IG    +V A D D  D   L      +  F+  D  HI      I+    L+   
Sbjct: 2299 EASLIGTPVLQVVALDADS-DNNKLVQYQIVQDTFNSTDYFHIDSSSGLILTARMLDHEL 2357

Query: 212  IQ---LVVVATDTGNPPRQASV 230
            IQ   L V ATD G PP  + V
Sbjct: 2358 IQQCSLKVRATDNGFPPLSSEV 2379



 Score = 45.1 bits (105), Expect = 0.053,   Method: Compositional matrix adjust.
 Identities = 54/199 (27%), Positives = 90/199 (45%), Gaps = 17/199 (8%)

Query: 45   FSKNEYSVSALENL-PVNYVLLTVTTNKP--RDLRVKYWL-SNDYGERFSI-SRQGDISL 99
            F + +Y V+  E+  P   VL    T++    +  + Y + S +   +F I S+ G IS+
Sbjct: 3237 FERRDYLVTVPEDTSPGTEVLSVFATSQDIGTNAEIAYLIRSGNEKGKFRINSKTGAISI 3296

Query: 100  MQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
             + LDYE+   +   V A D     ++   TVN++V +VND  P+F    Y   +     
Sbjct: 3297 FEALDYESCKDFYLVVEAKDGGTPALSAVTTVNVNVTDVNDNAPKFSQAVYSAVISE--- 3353

Query: 157  ADLTPGSVIGKVEAADGDK--GDRVTLSL-RGPYEKMFSINDS-GHISI-VDLSALNTST 211
             D   G  +  + A D D     ++  S+  G  +  FS++   G + +   L     S 
Sbjct: 3354 -DAAVGDSVIMLIAEDLDSPPNGQIHFSIVNGDQDNEFSVDPGLGLVKVKKKLDRERISG 3412

Query: 212  IQLVVVATDTGNPPRQASV 230
              LV+ A D+G PP  +SV
Sbjct: 3413 YSLVIQARDSGTPPLSSSV 3431



 Score = 42.7 bits (99), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 53/198 (26%), Positives = 86/198 (43%), Gaps = 11/198 (5%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGERFSIS-RQGDISLMQC 102
            +F+  EY     EN+ +   +++++      L  +    N  G  F+I+   G I+  + 
Sbjct: 1671 KFTLKEYQAEVNENVDIGTSVISLSVISQSTLVYEVKDGNMDG-VFTINPYSGVITSQKT 1729

Query: 103  LDYETEDSYRFTVYATDTL-MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTP 161
            LDYE    Y+  V AT+   M ++ATVNI +V+ ND  P F + QY   +      +   
Sbjct: 1730 LDYERASFYQIVVQATNMAGMASNATVNIQIVDENDNPPVFLFSQYLGSISEAAPVNSVV 1789

Query: 162  GSVIGK---VEAADGDKGDRVTLS---LRGPYEKMFSINDS-GHI-SIVDLSALNTSTIQ 213
             SV      + A D D      L    +    +K F+++ S G I +I +L     +   
Sbjct: 1790 RSVNNSPLVIRATDADSNQNALLVYQIVESTAKKYFTVDSSTGAIRTIANLDHETIAHFH 1849

Query: 214  LVVVATDTGNPPRQASVP 231
              V   D+GNP   A  P
Sbjct: 1850 FHVHVRDSGNPQLTAESP 1867



 Score = 42.7 bits (99), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 60/237 (25%), Positives = 106/237 (44%), Gaps = 16/237 (6%)

Query: 2   INEDDFLQPITLVVRAIQYDNQDRYALATLI-VSKAGTSLRELQFSKNEYSVSALENLPV 60
           I+ D+F     L ++A    +  +++   L+ ++        ++F K  Y V   E  P 
Sbjct: 332 IDWDNFPYGYNLTLQAKDKGSPQKFSAVKLVHIASPKKESIPMKFEKEAYDVLISEFSPP 391

Query: 61  NYVLLTVTTNKPRDLRVKYWLS-NDYGERFSIS-RQGDISLMQCLDYETEDSYRFTVYAT 118
             V++ V    P    V+Y +S ++  + F I+   G I+  + L    +D Y   VY T
Sbjct: 392 G-VVVAVVKLMPEPQGVEYRISPSEDAKYFKINPNTGLITTARSLKIVEKDLYELEVY-T 449

Query: 119 DTLMTTSATVNISVVNVNDWDPRFRYPQYELFL-PHIPLADLTPGSVIGKVEAADGDKGD 177
           +      A V + + + ND  P F+   Y  F+   +P+     GS +  V A D D+G+
Sbjct: 450 NKGDDLKAEVTVRLEDANDHTPEFQQASYSSFVNESVPV-----GSSVLAVSAVDKDRGE 504

Query: 178 R--VTLSLRGPYEKMFSIND-SGHISIVDLSALNTS--TIQLVVVATDTGNPPRQAS 229
              +T S+       F+IN  +G IS  +     +S  + + +V A+D G+P R  S
Sbjct: 505 NGYITYSVASLNSLPFTINQFTGVISTSEELDFESSPESYRFIVRASDWGSPYRHES 561



 Score = 42.7 bits (99), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 41/177 (23%), Positives = 81/177 (45%), Gaps = 10/177 (5%)

Query: 13   LVVRAIQYDNQDRYALATL---IVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTT 69
            L ++A+      + + A L    + K   S   L F +  Y+ + +E+  V  ++  V+ 
Sbjct: 1328 LTIKAVDNGRPQKSSTARLHIEWIKKPAPSPIPLTFDEPFYNFTIMESDKVTEIVGVVSV 1387

Query: 70   NKPRDLRVKY-WLSNDYGERFSISRQ-GDISLMQCLDYETEDSYRFTVYATDTLMTTSAT 127
             +P ++ + +  +  +Y   F   +  G I + + LD E    Y  TV  TD     +  
Sbjct: 1388 -QPSNIPLWFDIVGGNYDSSFDAEKGVGTIVIAKPLDAEQRSMYNMTVEVTDGTNIATTQ 1446

Query: 128  VNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR 184
            V I V++ ND  P F  P Y++ +      D+ P + I ++EA D D+  +++ ++ 
Sbjct: 1447 VLIKVLDNNDNGPEFSQPSYDVTISE----DILPDTEILQIEAIDRDEKHKLSYTIH 1499



 Score = 41.2 bits (95), Expect = 0.93,   Method: Compositional matrix adjust.
 Identities = 37/146 (25%), Positives = 70/146 (47%), Gaps = 17/146 (11%)

Query: 45   FSKNEYSVSALENLPVNYVLL---TVTTNKPRDLRVKYWLS-----NDYGERFSI-SRQG 95
            F    Y    +E +P+   L+    V  +   + +V Y L+         E F+I S  G
Sbjct: 2815 FETASYDAIIMEGMPIGTKLMQVKAVDADSSANGQVTYTLAVESELEKITEAFTIDSNSG 2874

Query: 96   DISLMQCLDYETEDSYRFTVYATD----TLMTTSATVNISVVNVNDWDPRFRYPQYELFL 151
             IS ++ LD+E + ++ F V A+D      ++++  V+++V ++ND  P F   ++E++ 
Sbjct: 2875 WISTLKDLDHEKDPAFTFAVVASDLGEALSLSSTTLVSVTVTDINDNAPVF---EHEVYR 2931

Query: 152  PHIPLADLTPGSVIGKVEAADGDKGD 177
              +  +D  PG V+  +   D D  D
Sbjct: 2932 GSVKESD-PPGEVVAVLSTWDEDTSD 2956



 Score = 40.8 bits (94), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 36/129 (27%), Positives = 60/129 (46%), Gaps = 9/129 (6%)

Query: 76   RVKYWL--SNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVV 133
            R++Y +   ND       S+ G I+L        E  Y   V  +D L T++A V+I ++
Sbjct: 2429 RLEYSILSGNDRTSFIMDSKSGVITLSNHRKQRMEPMYSLNVSVSDGLFTSTAQVHIQIL 2488

Query: 134  NVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEK-M 190
              N + P F    Y   +      + TPG+ +  V+A DGD G   +++ S+   + K  
Sbjct: 2489 GANLYSPVFSQSVYVAEVRE----NATPGTKVIHVKATDGDSGVYGQISYSIINDFAKDR 2544

Query: 191  FSINDSGHI 199
            F I+ +G I
Sbjct: 2545 FLIDSNGQI 2553



 Score = 40.8 bits (94), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 44/130 (33%), Positives = 60/130 (46%), Gaps = 12/130 (9%)

Query: 73   RDLRVKYWLSNDYG-ERFSISRQ-GDISLMQCLDYETEDSYRFTVYATD---TLMTTSAT 127
            RD  ++Y + +  G  RFSI  + G I     LD ET  SY  TVYATD     + T+  
Sbjct: 1075 RDGEIQYSIRDGSGLGRFSIDEETGVIYTADILDRETTKSYWLTVYATDHGVVPLYTTIE 1134

Query: 128  VNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR--- 184
            V I V +VND  P    P   ++ P +        SVI +++A D D      L+ R   
Sbjct: 1135 VYIEVEDVNDNAPLTSEP---IYYPTVMENSPKDVSVI-QIQAQDPDSSTNEKLTYRITS 1190

Query: 185  GPYEKMFSIN 194
            G  +  F IN
Sbjct: 1191 GNPQNFFVIN 1200


>gi|391336953|ref|XP_003742839.1| PREDICTED: protocadherin Fat 4-like [Metaseiulus occidentalis]
          Length = 2971

 Score = 62.0 bits (149), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 53/193 (27%), Positives = 95/193 (49%), Gaps = 15/193 (7%)

Query: 45  FSKNEYSVSALENLPVNYVL----LTVTTNKPRDLRVKYWLSNDYGERFSISRQ-GDISL 99
           F ++++++   E+LP    L         +   + R+  ++ N   ++F+++ + G + L
Sbjct: 666 FGEDKFALELPESLPPGTELPAFYQAFDIDAGENGRLVQFMINGSEDKFAVNNETGALML 725

Query: 100 MQCLDYETEDSYRFTVYATDTL---MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
           +  LDYET+ S+ F V A D      T SAT+ ISV N+N+++P F    Y   +     
Sbjct: 726 ISDLDYETQTSHEFIVLAVDGGTPPRTGSATIVISVQNINEYNPEFVGLPYNFQVAE--- 782

Query: 157 ADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSIN-DSGHISIVDLSALNTSTIQLV 215
            +   G+ +G ++A D D GD++T +L       F I  D G +  V  +  + +    V
Sbjct: 783 -NAAQGTSVGNIQATDRD-GDKITYTLAEGDTDFFGIERDHGRV-FVKKNLESRTHFHFV 839

Query: 216 VVATDTGNPPRQA 228
            VATD G P  ++
Sbjct: 840 AVATDDGAPSNRS 852



 Score = 61.2 bits (147), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 54/208 (25%), Positives = 94/208 (45%), Gaps = 22/208 (10%)

Query: 45  FSKNEYSVSALENLP----VNYVLLTVTTNKPRDLRVKYWLS--NDYGERFSISRQGDIS 98
           F   +Y    LEN      V Y+  +  +    D ++ YW+   ND G+ +     G++ 
Sbjct: 556 FEHTQYHFRILENTTRSETVGYIRASSPSRAQNDQQITYWIGDGNDAGKFWINPETGELV 615

Query: 99  LMQCLDYE---TEDSYRFTVYATDTL----MTTSATVNISVVNVNDWDPRFRYPQYELFL 151
           LM  +D +   ++  +   V A D L    +  S  V I V+++ND  P F   ++ L L
Sbjct: 616 LMDKVDRDPPASQRQFALQVLARDVLSISDLNISVPVVIDVIDINDNAPSFGEDKFALEL 675

Query: 152 PHIPLADLTPGSVIGKV-EAAD---GDKGDRVTLSLRGPYEKMFSINDSGHISIV-DLSA 206
           P      L PG+ +    +A D   G+ G  V   + G  +K    N++G + ++ DL  
Sbjct: 676 PE----SLPPGTELPAFYQAFDIDAGENGRLVQFMINGSEDKFAVNNETGALMLISDLDY 731

Query: 207 LNTSTIQLVVVATDTGNPPRQASVPAIM 234
              ++ + +V+A D G PPR  S   ++
Sbjct: 732 ETQTSHEFIVLAVDGGTPPRTGSATIVI 759



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 50/179 (27%), Positives = 86/179 (48%), Gaps = 14/179 (7%)

Query: 27  ALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSN 83
           A+A L V     + ++  F+ N Y+ + +E +P N  + T+     +   +  ++Y +  
Sbjct: 330 AVAPLTVHVVDINDQQPVFTHNYYNFTVVEEMPENTTVGTIKAIDRDSGVNAEIQYIILG 389

Query: 84  DYG-ERFSISRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWD 139
           D   + F +   G+I   + LD E E    F V A D     ++ + TV +SV ++ND  
Sbjct: 390 DQANDAFVVDDDGNIVTRRRLDREVEGKTEFLVIAYDGGVPQLSGTTTVAVSVEDINDNP 449

Query: 140 PRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR---GPYEKMFSIND 195
           P F   + + F  +IP  ++ P   + K+EA D D+GD   +  R   G  EK F IN+
Sbjct: 450 PYF---EGDTFFVNIP-EEVDPPKEVYKLEAKDVDQGDNAVMKYRIIGGNEEKNFEINE 504



 Score = 55.1 bits (131), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 48/187 (25%), Positives = 86/187 (45%), Gaps = 15/187 (8%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDL-RVKYWLSNDYGERFSI-SRQGDISLMQC 102
            FSK  YS S  ENLP  +  L ++      +  + Y + N     F+I ++ GDI   + 
Sbjct: 979  FSKTAYSASLPENLPAGHCFLHISATSGDSVDHLNYKILNK-DIPFTINAKTGDICTAKV 1037

Query: 103  LDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPG 162
            LD E +DSY F V A D        +++ + + ND  P+F   +Y + +P     D   G
Sbjct: 1038 LDRELKDSYEFAVSAEDGKFDAKVPISVEITDENDNPPKFEKERYVVTIP----TDSQAG 1093

Query: 163  SVIGKVEAADGDKGD--RVTLSLRGPYEKMFSINDSGHI-----SIVDLSALNTSTIQLV 215
              + ++ A D D  +   +T  ++  +  +F I+    +     S+++    N ++ ++ 
Sbjct: 1094 RSVIQLHAVDLDTANNGEITYWIKNTH-GIFEIDPKTGLVRLASSLLNARRGNNASFEME 1152

Query: 216  VVATDTG 222
            V A D G
Sbjct: 1153 VFAQDHG 1159



 Score = 54.3 bits (129), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 69/230 (30%), Positives = 110/230 (47%), Gaps = 27/230 (11%)

Query: 11   ITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYV-LLTVTT 69
            +TLV    ++D Q     AT+ +       R+ +F++N Y  S LEN+    V  + + +
Sbjct: 1892 LTLVASDGKWDAQ-----ATMKIYVHEAEERDPRFNQNTYKFSVLENVAGAVVGQVELQS 1946

Query: 70   NKPR-DLRVKYWLSN-DYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDTLMTTS-- 125
             K R + +++Y + N D    F+I++ G+I     LD E    Y FTV   +   TT   
Sbjct: 1947 KKTRANSQMRYSIVNTDVRTLFNITKDGEIYTKVGLDREKRSKYTFTVMLEERRPTTKVT 2006

Query: 126  -ATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIG---KVEAADGDKGDRVTL 181
             + V++ VV+VND  P F      +   + P     PG+ +    ++ A D D G+   L
Sbjct: 2007 VSEVSVDVVDVNDEIPTFSQSYQGVIKENSP-----PGTTVTIKPQIHAVDNDAGNNSIL 2061

Query: 182  --SLRGPYEKMFSINDSGHISIVD---LSALN---TSTIQLVVVATDTGN 223
              SL GP  ++FSI D+G +       +S LN   T   +L+V A D GN
Sbjct: 2062 AYSLGGPGSELFSILDNGAVIFTGGSPISTLNRELTDKYELLVTARDLGN 2111



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 59/214 (27%), Positives = 99/214 (46%), Gaps = 30/214 (14%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDL---RVKYW-LSNDYGERFSISRQ-GDISL 99
            F K+EY+V   EN P  +V++ V+      L   +++Y+ +  D  E F++    G +S+
Sbjct: 1604 FDKSEYNVELEENTPPGHVVVHVSATDRDGLDSNKLRYYIMEGDSEEEFTLDESSGILSV 1663

Query: 100  MQCLDYETEDSYRFTVYATDTLMTTS-ATVNISVVNVNDWDPRF-----------RYPQY 147
                D E   SY   + A D+   T  AT+N+ ++++NDW P F             P  
Sbjct: 1664 KTIPDREKTPSYSLKIVAIDSANNTGRATINVKILDMNDWTPTFLNDTFFLNVTEGRPSL 1723

Query: 148  ELFLPHIPLADLTPGSVIGKVE--AADGDKGDRVTLSL--RGPYEKMFSINDSGHISIVD 203
              F+  +P+AD   G +  +VE    DG+  ++  L +   G   K+ S  D      VD
Sbjct: 1724 NKFV-QLPVADYDDG-INRQVELYIVDGNNENQFRLGVNEHGALLKVVSELDRDKYK-VD 1780

Query: 204  LSALNTSTIQLVVVATDTGNPPRQA--SVPAIMH 235
             +AL+     ++V A D G P R    +V  ++H
Sbjct: 1781 DTALHF----VIVAARDMGTPSRTGTTTVAVVIH 1810



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 62/205 (30%), Positives = 95/205 (46%), Gaps = 27/205 (13%)

Query: 45   FSKNEYSVSALENLPVNY--------VLLTVTTNKPRDLRVKYWL--SNDYGERFSIS-R 93
            F K+EY+ +  E    NY        VL  V  +K ++  V Y L    D    F I   
Sbjct: 2233 FVKSEYNFNIEEG---NYRETKRRLGVLRAVDEDKGKNGAVDYALLVRKDEQLPFHIDVH 2289

Query: 94   QGDISLMQCLDYETEDSYRFTVYATDT-LMTTSATVNISVV--NVNDWDPRFRYPQYELF 150
             G++     LD ET+D Y F V A D   +  ++TVN+++V  +VND  P+F    Y   
Sbjct: 2290 TGELFATGILDRETKDKYLFQVLALDNGEVPQNSTVNVTIVIDDVNDEKPKFFTDPY--- 2346

Query: 151  LPHIPLADLTPGSVIGKVEAADGDKGDR--VTLSLRGPYEKMFSINDSGHISIVDLSALN 208
            L  +P  ++ PG  + ++ A D D G+   V   L G ++  F I DS   ++  LS L+
Sbjct: 2347 LAQVP-ENMDPGQKVTQIRAFDPDAGENGLVFYKLGGGHDNRFYI-DSKDGTVWTLSKLD 2404

Query: 209  TSTIQ---LVVVATDTGNPPRQASV 230
                +   + V+A D G P   A+ 
Sbjct: 2405 FEQQEFYNMTVIAYDQGKPSLSATA 2429



 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 49/191 (25%), Positives = 86/191 (45%), Gaps = 17/191 (8%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLR----VKY-WLSNDYGERFSI-SRQGDI 97
           +F    Y     E+LP   +   VT  K +DL     ++Y +++ +  E F I +  G I
Sbjct: 247 EFVDAPYEAHVGESLPAGAL---VTQVKAKDLDANSLLQYSFIAGNDDELFRIDTHSGTI 303

Query: 98  SLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLA 157
           S +Q LD+E + +Y   V  +D   T  A + + VV++ND  P F +  Y   +    + 
Sbjct: 304 STLQVLDFEKKQAYDLLVQVSDGFNTAVAPLTVHVVDINDQQPVFTHNYYNFTV----VE 359

Query: 158 DLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSINDSGHI-SIVDLSALNTSTIQ 213
           ++   + +G ++A D D G    +    L       F ++D G+I +   L        +
Sbjct: 360 EMPENTTVGTIKAIDRDSGVNAEIQYIILGDQANDAFVVDDDGNIVTRRRLDREVEGKTE 419

Query: 214 LVVVATDTGNP 224
            +V+A D G P
Sbjct: 420 FLVIAYDGGVP 430



 Score = 44.3 bits (103), Expect = 0.091,   Method: Compositional matrix adjust.
 Identities = 44/160 (27%), Positives = 75/160 (46%), Gaps = 13/160 (8%)

Query: 77   VKYWLSNDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISV 132
            V Y L   +  RF I S+ G +  +  LD+E ++ Y  TV A D     ++ +A + ++V
Sbjct: 2376 VFYKLGGGHDNRFYIDSKDGTVWTLSKLDFEQQEFYNMTVIAYDQGKPSLSATAKLWVTV 2435

Query: 133  VNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFS 192
             + ND  P F    Y L +      +   G V+  ++A  G+    +  S     +  F+
Sbjct: 2436 TDRNDVIPDFAKSVYTLEVAE----NTKVGDVVFTLDAGSGNFHYSLVTSDE---DNTFT 2488

Query: 193  IN-DSGHISIVD-LSALNTSTIQLVVVATDTGNPPRQASV 230
            +  ++G I +   L +   S  +LVV A+D G+PPR  S 
Sbjct: 2489 VEPNTGEIRLAKPLDSAQHSHYKLVVKASDEGDPPRSDSA 2528



 Score = 42.0 bits (97), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 36/130 (27%), Positives = 57/130 (43%), Gaps = 10/130 (7%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKP---RDLRVKY-WLSNDYGERFSISR-QGDISL 99
            F +  Y     E+ P+  V+ TV    P    + R++Y +  ND    F I    G I++
Sbjct: 1819 FEREAYYQFISESAPIGTVVETVKATDPDTAANTRMRYRFAGNDPTIPFEIDPVSGAINV 1878

Query: 100  MQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADL 159
             + LD      Y  T+ A+D      AT+ I V    + DPRF    Y+       + + 
Sbjct: 1879 TRHLDISESQEYTLTLVASDGKWDAQATMKIYVHEAEERDPRFNQNTYKF-----SVLEN 1933

Query: 160  TPGSVIGKVE 169
              G+V+G+VE
Sbjct: 1934 VAGAVVGQVE 1943


>gi|334311103|ref|XP_003339580.1| PREDICTED: protocadherin gamma-C4 [Monodelphis domestica]
          Length = 975

 Score = 62.0 bits (149), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 63/230 (27%), Positives = 103/230 (44%), Gaps = 22/230 (9%)

Query: 13  LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKP 72
           LV+ A+   +  R   A L VS    +     F ++ Y +S LE+ P   +L+ +    P
Sbjct: 209 LVLTAVDGGSPPRSGTAELKVSVLDVNDNAPTFEQSSYRISVLESAPAGTLLIQLNATDP 268

Query: 73  ---RDLRVKYWLSNDYGER----FSI-SRQGDISLMQCLDYETEDSYRFTVYATD---TL 121
                  + +  SN   ER    F + S  G ++L   LD+E ++ Y F V A D     
Sbjct: 269 DQGSSGNITFSFSNHTPERVRALFGLNSITGQLTLRGPLDFEVDNYYEFDVRARDGGMPA 328

Query: 122 MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLAD-LTPGSVIGKVEAADGDKGDRVT 180
           M    ++ + V++VND       PQ  L      L +   PG+V+  +   D D G    
Sbjct: 329 MEQHCSLRVDVLDVND-----NAPQITLTSELGTLRESAEPGTVVALISVQDPDSGPNGD 383

Query: 181 LSLRGPYEKMFSINDS--GHISIVDLSALN---TSTIQLVVVATDTGNPP 225
           +SLR P    F++  +     S+V  +AL+    S  ++ V A+D+G+PP
Sbjct: 384 VSLRIPEHLPFALKSAFKNQFSLVTAAALDREVESKYEIPVTASDSGSPP 433



 Score = 44.3 bits (103), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 46/189 (24%), Positives = 79/189 (41%), Gaps = 13/189 (6%)

Query: 95  GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYEL-- 149
           G +   +  DYE   + +F V A D     ++++ TV + V+++ND  P    P+     
Sbjct: 514 GAVHATRSFDYEQTQTLQFEVQARDRGDPPLSSTVTVRLFVLDLNDNAPAVLRPKARQGS 573

Query: 150 FLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIND-SGHISIVDLS 205
             P      +  G ++ KV A D D G    +S   L  P   +F+++  +G I      
Sbjct: 574 LCPQALPPSVGAGHLVTKVTAVDLDSGYNAWVSYQLLEAPDPSLFAVSRYAGEIRTAVPI 633

Query: 206 ALNTSTIQLVVVATDTGNPPRQASVPAIMHFPE----AIVQQASSKLNSGTSSTVLIILG 261
             +    +LV+V  D G+PP   SV  ++   E    A+             S + + L 
Sbjct: 634 PADLPPQKLVIVVKDNGSPPLSTSVTLLVSLEEDSHPALPDLREHSAKPQGESHLTLYLA 693

Query: 262 VVLIVLGFV 270
           V L+ + FV
Sbjct: 694 VSLVAICFV 702



 Score = 42.0 bits (97), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 40/141 (28%), Positives = 67/141 (47%), Gaps = 17/141 (12%)

Query: 103 LDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADL 159
           LD E E  Y   V A+D+    ++T  T+ ++V +VND  P F    +E+F+      + 
Sbjct: 412 LDREVESKYEIPVTASDSGSPPLSTRRTIFLNVSDVNDNPPSFIQRSHEVFVQE----NN 467

Query: 160 TPGSVIGKVEAADGDKG--DRVTLSLRGPYEK------MFSIN-DSGHI-SIVDLSALNT 209
            PG ++  + A+D D G    ++ SL  P  +        S+N  +G + +        T
Sbjct: 468 RPGDLLCSLAASDPDSGLNALISYSLLEPRGRDVLASSFISLNPQTGAVHATRSFDYEQT 527

Query: 210 STIQLVVVATDTGNPPRQASV 230
            T+Q  V A D G+PP  ++V
Sbjct: 528 QTLQFEVQARDRGDPPLSSTV 548


>gi|347967593|ref|XP_312660.5| AGAP002310-PA [Anopheles gambiae str. PEST]
 gi|333468389|gb|EAA07876.6| AGAP002310-PA [Anopheles gambiae str. PEST]
          Length = 1762

 Score = 62.0 bits (149), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 59/197 (29%), Positives = 94/197 (47%), Gaps = 12/197 (6%)

Query: 37  GTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLS--NDYGERFSISR- 93
           G + +  +F++  Y V   E   +N  ++ +    P +  V Y ++  ND   +FSI + 
Sbjct: 609 GPNTKPPRFARPVYEVQVSEGAEINSTVIVLKAEDPENDPVSYAITTGNDL-RQFSIGKD 667

Query: 94  QGDISLMQCLDYETEDSYRFTVYATDT-LMTTSATVNISVVNVNDWDPRFRYPQYELFLP 152
            G IS+++ LD E    Y+  V A D   + +SATVNI V ++ND +P F   Q    LP
Sbjct: 668 SGVISVIRKLDREDLTRYQLIVRAEDNGGLASSATVNIKVTDINDKNPEFDERQ----LP 723

Query: 153 HIPLADLTPGSV-IGKVEAADGDKGDRVTLSLRGPYEKMFSIND-SGHI-SIVDLSALNT 209
           ++   D    +V IG V A D D+G    ++   P +  F I+  +G + + V L     
Sbjct: 724 YVFAVDEGRENVSIGTVRATDADEGMNAEITYTVPSDIPFRIDSRTGEVRTKVALDYEKQ 783

Query: 210 STIQLVVVATDTGNPPR 226
              + VV A D    PR
Sbjct: 784 KEYRFVVTAKDGAPEPR 800



 Score = 45.4 bits (106), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 39/142 (27%), Positives = 63/142 (44%), Gaps = 10/142 (7%)

Query: 56  ENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTV 115
           EN+ +  V  T   ++  +  + Y + +D   R   SR G++     LDYE +  YRF V
Sbjct: 733 ENVSIGTVRAT-DADEGMNAEITYTVPSDIPFRID-SRTGEVRTKVALDYEKQKEYRFVV 790

Query: 116 YATDTL---MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAAD 172
            A D        +A+V + V +V D  PRF     E+ +P     +  P   +  V A D
Sbjct: 791 TAKDGAPEPRLGTASVTVKVRDVADEVPRFMESTVEIKVP-----ENVPDMTVTTVRAFD 845

Query: 173 GDKGDRVTLSLRGPYEKMFSIN 194
            D    +T +LR     +F ++
Sbjct: 846 PDTKPEITYTLRRGPGDLFKVD 867



 Score = 43.5 bits (101), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 76/282 (26%), Positives = 116/282 (41%), Gaps = 53/282 (18%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVK----YWLSNDYGERFSI-SRQGDIS 98
            +F ++   +   EN+P     +TVTT +  D   K    Y L    G+ F + +R G I 
Sbjct: 819  RFMESTVEIKVPENVPD----MTVTTVRAFDPDTKPEITYTLRRGPGDLFKVDARTGQIK 874

Query: 99   LMQCLDYETEDSYRFTVYATDTLMTTSA---TVNISVVNVNDWDPRFRYPQYELFLPH-I 154
             ++ LDYE +  +   V   +   T +     V + V + ND  P F      + +P  +
Sbjct: 875  TIRGLDYEKDKMHELLVGTLENNGTGAGDYIRVLVEVEDRNDIPPVF------VSIPEPV 928

Query: 155  PLADLTP-GSVIGKVEAADGDKGD-----RVTLSLRGPYEKMFSIN-DSGHISIV-DLSA 206
             + D  P G+++G + A DGD        R  L  RG   K F ++ DSG + I  DL  
Sbjct: 929  SINDNLPIGAIVGSMPAVDGDGSSPGNVVRYELVGRGKALKYFQVDADSGIVRIRDDLGK 988

Query: 207  LNTSTIQLVVVATDTGNPPRQ--ASVPA-IMHFP-EAIVQQASSKLNSGTSSTVLIILGV 262
               S   + V A D G P     +++P  + H P       A S+L SG       I+ +
Sbjct: 989  EEDSEYLIDVRAFDMGEPQLSSVSTLPVYVGHIPANPNGDSAESRLESGG------IVNL 1042

Query: 263  VLIVLGF----------------VIILLILYIHKNKHTKNNG 288
             +  L F                  I LI  I+  K TK+NG
Sbjct: 1043 EVQGLAFSDDSYTTSVPESTGVNATIKLIQIINSKKATKHNG 1084


>gi|157649936|gb|ABV59361.1| protocadherin nu14 [Callorhinchus milii]
          Length = 988

 Score = 62.0 bits (149), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 72/275 (26%), Positives = 123/275 (44%), Gaps = 34/275 (12%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTTNKP---RDLRVKYWLSNDYGERFSI-------SR 93
           +F++  Y+   +EN  +   + +VT   P    + R+ Y L     +  S+       ++
Sbjct: 452 RFAQPLYTAHVMENNVIGTSIYSVTALDPDANENSRLTYSLLESQVQNTSVFNYVSVNAQ 511

Query: 94  QGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYEL- 149
            GD+   +  DYE   S++  V A D     ++ + +VNI +++ ND  P    P  E  
Sbjct: 512 NGDVLSQRSFDYEQLKSFQIQVQAQDKGEPALSGNVSVNIIILDQNDNSPVIVSPSPEFG 571

Query: 150 -FLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-DSGHI----S 200
             +         PG ++ KV A D D G    LS   ++     +F+I+ D+G I    S
Sbjct: 572 STVTETVSRLAEPGYLVSKVSAIDADTGQNGRLSYQIVQATDPGLFTISPDTGEIWTIRS 631

Query: 201 IVDLSALNTSTIQLVVVATDTGNPPRQASVPAIMH--------FPEAIVQQASSKLNSGT 252
           +VD  A   +  +LVVVA D G+P   A+V  ++           E  V      + SG 
Sbjct: 632 VVDKDA---NKQRLVVVAKDNGSPSLSATVTIMLSVVGSDAEMLSEVNVLMEDPWVTSGV 688

Query: 253 SSTVLIILGVVLIVLGFVIILLILYIHKNKHTKNN 287
           S  ++I LG    +   V+I+L + +HKN++   N
Sbjct: 689 SIYLVIALGTTSSIFLVVLIVLAVKVHKNRNGLGN 723



 Score = 43.5 bits (101), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 49/200 (24%), Positives = 87/200 (43%), Gaps = 20/200 (10%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVT---TNKPRDLRVKYWLSNDYGER----FSI-SRQGD 96
           F ++EY VS LEN+P   +++ +     ++  +  + Y  +     R    F++ S+ G+
Sbjct: 240 FPQSEYKVSLLENIPQGTLVMKLNASDADEGYNGEIVYSFAGHTSARMRQLFAVNSKTGE 299

Query: 97  ISLMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
           I +   LD E   ++   V ATD     + T   V + V++VND  P        LF P 
Sbjct: 300 IRVKGKLDREENIAFEINVQATDKGPNAIPTYCHVLVDVIDVNDNAPEITL--TSLFSPF 357

Query: 154 IPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSGH-----ISIVDLSALN 208
              +   PG+++  + A D D G    +  +      F ++ S       ++   L   N
Sbjct: 358 SEAS--RPGTLVALIGATDRDSGANGKVDCQILNHIPFKLDSSSKNYYRLVTSQLLDREN 415

Query: 209 TSTIQLVVVATDTGNPPRQA 228
           TST  + +  +D G+ P  A
Sbjct: 416 TSTYDMTIACSDRGSSPLTA 435


>gi|170064482|ref|XP_001867543.1| neural-cadherin [Culex quinquefasciatus]
 gi|167881873|gb|EDS45256.1| neural-cadherin [Culex quinquefasciatus]
          Length = 3396

 Score = 62.0 bits (149), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 65/196 (33%), Positives = 96/196 (48%), Gaps = 20/196 (10%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVT-TNKPRDLRVKYWL-SNDYGERFSISRQ---GDISL 99
           F+   Y  S  E+ P    + TVT T+   D R+ Y + S +   RFSI+ Q   G I++
Sbjct: 767 FNPKYYEASIAEDQPPGTPVTTVTATDLDEDSRLHYEITSGNTRGRFSITSQNGRGLITI 826

Query: 100 MQCLDYETEDSYRFTVYATDT-LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLAD 158
            Q LDY+ E  +  TV ATD+   +  A VNI++ + N++ P F    Y   +      D
Sbjct: 827 AQSLDYKQEQRFALTVSATDSGQRSDQAIVNINITDANNFAPVFENAPYTASV----FED 882

Query: 159 LTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIND--SGHI---SIVDLSALN--- 208
              G+ +  V A+D D G   ++T SL          N+  S H+   +IV  +AL+   
Sbjct: 883 APVGTTVLMVFASDNDVGLNAQITYSLNEGSSNGLGSNEPFSVHVQTGAIVTTAALDRET 942

Query: 209 TSTIQLVVVATDTGNP 224
           TST  L V A D+GNP
Sbjct: 943 TSTFLLTVTAKDSGNP 958



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 64/231 (27%), Positives = 102/231 (44%), Gaps = 17/231 (7%)

Query: 13  LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVT---T 69
           LV+RA    +  R     L+V+    +    +F   ++  + LE++PV Y ++ V    +
Sbjct: 630 LVIRAQDGGSPSRSNTTQLLVNVQDANDNAPRFYTTQFQEAVLESVPVGYNIVRVQAYDS 689

Query: 70  NKPRDLRVKYWLSN-DYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDTLM---TT 124
           ++  +  + Y + + D     +I SR G I     LD E +  Y F V A D  +   + 
Sbjct: 690 DEGVNSEISYRIQDRDENSPLAIDSRTGWIHTTSPLDREEKSRYVFQVVAIDGGIPPKSA 749

Query: 125 SATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSL- 183
           S +V +++ ++ND DP F    YE  +      D  PG+ +  V A D D+  R+   + 
Sbjct: 750 STSVVVTIQDINDNDPIFNPKYYEASIAE----DQPPGTPVTTVTATDLDEDSRLHYEIT 805

Query: 184 RGPYEKMFSI---NDSGHISIVD-LSALNTSTIQLVVVATDTGNPPRQASV 230
            G     FSI   N  G I+I   L         L V ATD+G    QA V
Sbjct: 806 SGNTRGRFSITSQNGRGLITIAQSLDYKQEQRFALTVSATDSGQRSDQAIV 856



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 45/160 (28%), Positives = 79/160 (49%), Gaps = 15/160 (9%)

Query: 92  SRQGDISLMQCLDYETEDSYRFTVYATDTLM------TTSATVNISVVNVNDWDPRFRYP 145
           +R G I+    LD E  + Y   V ATD  +      +T+ATV ++V++ ND  P+F   
Sbjct: 499 ARTGTITTRGALDREISEMYVIQVMATDMAIPQSERKSTTATVFVNVLDDNDNYPQFSER 558

Query: 146 QYELFLPHIPLADLT-PGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIND-SGHIS 200
            Y +   H+     T   +VI ++ A D DKG+   +    + G  +  FS++  SG + 
Sbjct: 559 TYTV---HVSEDQWTNENNVIAQIRATDADKGNNAAVRYAIIGGNTQSQFSMDSISGDVL 615

Query: 201 IVD-LSALNTSTIQLVVVATDTGNPPRQASVPAIMHFPEA 239
           +V  L   +  + +LV+ A D G+P R  +   +++  +A
Sbjct: 616 LVKPLDYESIRSYRLVIRAQDGGSPSRSNTTQLLVNVQDA 655



 Score = 48.5 bits (114), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 59/207 (28%), Positives = 91/207 (43%), Gaps = 21/207 (10%)

Query: 44  QFSKNEYSVSALENLPVN-----YVLLTVTTNKPRDLRVKYWL-SNDYGERFSI-SRQGD 96
           QFS+  Y+V   E+   N       +     +K  +  V+Y +   +   +FS+ S  GD
Sbjct: 554 QFSERTYTVHVSEDQWTNENNVIAQIRATDADKGNNAAVRYAIIGGNTQSQFSMDSISGD 613

Query: 97  ISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNV---NDWDPRFRYPQY-ELFLP 152
           + L++ LDYE+  SYR  + A D    + +     +VNV   ND  PRF   Q+ E  L 
Sbjct: 614 VLLVKPLDYESIRSYRLVIRAQDGGSPSRSNTTQLLVNVQDANDNAPRFYTTQFQEAVLE 673

Query: 153 HIPLADLTPGSVIGKVEAADGDKGDRVTLSL----RGPYEKMFSINDSGHISIVD-LSAL 207
            +P+     G  I +V+A D D+G    +S     R     +   + +G I     L   
Sbjct: 674 SVPV-----GYNIVRVQAYDSDEGVNSEISYRIQDRDENSPLAIDSRTGWIHTTSPLDRE 728

Query: 208 NTSTIQLVVVATDTGNPPRQASVPAIM 234
             S     VVA D G PP+ AS   ++
Sbjct: 729 EKSRYVFQVVAIDGGIPPKSASTSVVV 755



 Score = 47.0 bits (110), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 67/253 (26%), Positives = 106/253 (41%), Gaps = 44/253 (17%)

Query: 14   VVRAIQYDNQDRYALATLIVSKAGTSLRELQ----------------FSKNEYSVSALEN 57
            + +++ Y  + R+AL    VS   +  R  Q                F    Y+ S  E+
Sbjct: 826  IAQSLDYKQEQRFALT---VSATDSGQRSDQAIVNINITDANNFAPVFENAPYTASVFED 882

Query: 58   LPVNYVLLTVTTNKPR---DLRVKYWL----SNDYG--ERFSISRQ-GDISLMQCLDYET 107
             PV   +L V  +      + ++ Y L    SN  G  E FS+  Q G I     LD ET
Sbjct: 883  APVGTTVLMVFASDNDVGLNAQITYSLNEGSSNGLGSNEPFSVHVQTGAIVTTAALDRET 942

Query: 108  EDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSV 164
              ++  TV A D+    +  +  V IS+ ++ND  P+F  P Y+  +      D   G+ 
Sbjct: 943  TSTFLLTVTAKDSGNPSLADTTDVEISITDINDNSPQFDVPLYQATIAE----DAFIGTS 998

Query: 165  IGKVEAADGDKG--DRVT--LSLRGPYEKMFSINDSGHISIVDLSALNTSTI---QLVVV 217
            + ++ A D D G   RV   LS +   +  F I+ S  + I     L+  +I    L+ +
Sbjct: 999  VLQISATDDDMGLNGRVKFMLSSKDVEDGSFVIDPSSGV-IRTNKGLDRESIAVYHLIAI 1057

Query: 218  ATDTGNPPRQASV 230
            A D G P   +SV
Sbjct: 1058 AADRGTPTLSSSV 1070



 Score = 39.3 bits (90), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 40/153 (26%), Positives = 66/153 (43%), Gaps = 25/153 (16%)

Query: 41  RELQ-----FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGER----FSI 91
           REL+     F +  Y VSA E  P    + TV    P    V Y + +    R    F I
Sbjct: 324 RELRNQSPYFEQALYVVSAQEEQPAGTEITTVRARDPEHSVVSYTMVSLLDSRSQSMFQI 383

Query: 92  -SRQGDISLMQCLDYETEDSYRFTVYATDTLM---TTSATVNISVVNVNDWDPRFRYPQY 147
            ++ G +  +  LD E  D + F + ATD      + ++T+ ++V++ ND  P F   ++
Sbjct: 384 NTKSGTVKTVAILDREVMDVHYFRIIATDDSFPPRSGTSTLQVNVLDCNDHTPAFESEEF 443

Query: 148 ELFLPHIPLADLTPGSVIGK----VEAADGDKG 176
                    A++  G+ +G     + A D D G
Sbjct: 444 H--------ANVREGTSVGSSVITIRATDQDIG 468


>gi|125835070|ref|XP_693952.2| PREDICTED: protocadherin Fat 1-like [Danio rerio]
          Length = 4472

 Score = 62.0 bits (149), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 58/218 (26%), Positives = 104/218 (47%), Gaps = 19/218 (8%)

Query: 33   VSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGE---RF 89
            + K   + + L F +   S S +EN PV + ++ V + +P D  V  W + + G    RF
Sbjct: 1340 IPKPKLAKQALAFEEIPLSFSVMENDPVAH-MVGVISAQPLDSPV--WFTINGGSTDSRF 1396

Query: 90   SISR-QGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYE 148
             + +  G I +   LD E + +Y  TV ATD   + S  V I V++ N+  P+F    YE
Sbjct: 1397 DVEKASGTIIIAGALDAERQSNYNLTVEATDGTRSISTQVIIQVLDTNEHRPKFSQNHYE 1456

Query: 149  LFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSIN----DSGHISIVDL 204
            + +P     ++ PG  I ++ A D D+ ++++ +L    + +FS+     D G   +   
Sbjct: 1457 ISIPE----EIQPGMKILEINATDKDENNKLSYTLLSSTD-LFSLKKFRLDPGTGFLYTT 1511

Query: 205  SALNTSTIQ---LVVVATDTGNPPRQASVPAIMHFPEA 239
              L+  T+    L V+  D G P +   V  I++  ++
Sbjct: 1512 EKLDHETMHRHILTVMVRDQGVPVKSNVVRVIINVEDS 1549



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 60/212 (28%), Positives = 93/212 (43%), Gaps = 22/212 (10%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNK---PRDLRVKYWL--SNDYGERFSISRQGDISL 99
            FS+  YS    E+  +   +LTV  N    P + +++Y +  SN        +  G++ L
Sbjct: 3326 FSQKIYSAVVSEDTRLASTVLTVLANDLDGPLNNQIRYSIEESNQSCPFIMDAVSGELQL 3385

Query: 100  MQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
             + LD E   SY  TV A+D+   L + SA +NI+V +VND  P F    Y L +     
Sbjct: 3386 ARQLDREMVASYMLTVMASDSGSPLKSDSAAINIAVSDVNDNPPVFSQANYSLIIQE--- 3442

Query: 157  ADLTPGSVIGKVEAADGDK---GDRVTLSLRGPYEKMFSINDSGHISIVDLSALNTSTIQ 213
             +L  G+ + ++   D D    G   +  L G     FSI+  G +       L      
Sbjct: 3443 -NLPSGTSVLQLNVTDNDSLHNGPPFSFILIGVEANPFSIDQQGLVKTA--GPLTKGQYT 3499

Query: 214  LVVVATDTGNPPRQASVPAIMHFPEAIVQQAS 245
            L V  +D G PP ++     + F   +V QAS
Sbjct: 3500 LQVQVSDNGKPPLKS-----VTFITVLVAQAS 3526



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 54/198 (27%), Positives = 92/198 (46%), Gaps = 15/198 (7%)

Query: 47   KNEYSVSALENLPVNYVLLTVTTNKP---RDLRVKYWLSNDYGERFSI-SRQGDISLMQC 102
            K+ Y+ +  E++ +   +L V+        +  + Y LS    E F+I S+ G +  +  
Sbjct: 3016 KDVYAQAVPEDVLIGKHILQVSATDADIQSNAEITYQLSGSGAESFTIDSKTGAVKTLAT 3075

Query: 103  LDYETEDSYRFTVYATDTL-MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLT- 160
            LD E  D Y  TV A D       A++ I+V + ND  P+F    +     H+ +   T 
Sbjct: 3076 LDREVTDVYNLTVRAVDKDNHFCQASLLITVEDANDNAPKFTSDPH-----HVSIYQNTQ 3130

Query: 161  PGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDSGHISIVD--LSALNTSTIQLVV 216
            PG+ + ++EA D D G   ++  S       +FSI +S  I  ++  L     +   L V
Sbjct: 3131 PGTYVARLEAFDADIGMNGKIRYSFEDSAGGLFSIEESSGIISLERSLDKQMKAMHVLRV 3190

Query: 217  VATDTGNPPRQASVPAIM 234
             ATD G P R +S+ +++
Sbjct: 3191 RATDQGFPHRLSSLGSVV 3208



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 49/205 (23%), Positives = 93/205 (45%), Gaps = 30/205 (14%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYG-ERFSISRQGDISLM 100
            F+++EY +   EN PV  ++  V     +  +  ++ +++ ND   ++F+I+  G I   
Sbjct: 2485 FTQDEYLIELAENSPVGTLVGQVEAIDEDPGKYGQLTFFIMNDIARDKFNINEDGQIYTE 2544

Query: 101  QCLDYET--EDSYRFTVYATDTL-MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLA 157
            +  D E   E   R ++ A D   +     V + + +VND  P+F++ +Y++ +P     
Sbjct: 2545 ESFDRENPEEKIIRISLMAKDGGGLLGFCNVIVILSDVNDNSPKFKHSEYKVTVPR---- 2600

Query: 158  DLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSI-NDSGHISIVDLSA---------- 206
            D    + + K  A D D+G    +        +++I +D  H  I  LS           
Sbjct: 2601 DAPSSTTVIKTTAVDEDEGSNADI--------VYTIESDIDHFEIHSLSGAIVTKESLIG 2652

Query: 207  LNTSTIQLVVVATDTGNPPRQASVP 231
            L        V A D+G+PP+Q+ +P
Sbjct: 2653 LENGLYSFFVKAKDSGSPPKQSIIP 2677



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 35/110 (31%), Positives = 57/110 (51%), Gaps = 6/110 (5%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLS--NDYGERFSIS-RQGDISLMQ 101
            F +  Y +  LEN+ V   +L V  N+    R  Y +S  N + + F I    G I ++Q
Sbjct: 2175 FERPFYKIEILENVLVGTSILQVVANQSAGPRTVYSISGGNPFSQ-FDIHFNSGLIKVIQ 2233

Query: 102  CLDYETEDSYRFTVYATDTLMTTSATVNISVV--NVNDWDPRFRYPQYEL 149
             LDYE   +YR ++ ATD+L   ++ V + ++  +VND  P+F    Y +
Sbjct: 2234 PLDYEAHPAYRLSIQATDSLTGANSDVFVDIILEDVNDNAPKFEAAVYSI 2283



 Score = 47.4 bits (111), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 59/239 (24%), Positives = 95/239 (39%), Gaps = 26/239 (10%)

Query: 11   ITLVVRAIQYDNQDRYALATLIVSKAGTSLREL---------------QFSKNEYSVSAL 55
            I  V R +  + +D+Y L      K   SL  +               +F  N  S    
Sbjct: 1612 IITVARELDCETRDQYELIIKASDKGEPSLSAVTAVRITVTISDNTKPKFPSNSLSAEVS 1671

Query: 56   ENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGERFSIS-RQGDISLMQCLDYETEDSYRFT 114
            EN+PV   +  V+      +  +    N+ G  F I+   G +   + LD+ET  SY+  
Sbjct: 1672 ENVPVGSFVTLVSAFSQSTVFYQIIEGNEKGA-FDINPNSGAVITRKKLDFETLSSYKLI 1730

Query: 115  VYATDTL-MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLA-----DLTPGSVIGKV 168
            V  TD   M++S TVNI + + ND  P F   +Y  F+    +      +     ++ + 
Sbjct: 1731 VQGTDMAEMSSSVTVNIYLKDENDNAPVFTQSEYTGFISESAIIRSVVLNSQKAPLVVRA 1790

Query: 169  EAADGDKGDRVTLSLRGPYEKMFSINDSGHISIVDLSALNTSTIQLV---VVATDTGNP 224
              AD     R+   +  P+   +   DS   +I  LS L+    ++    V   DTGNP
Sbjct: 1791 TDADQHSNARLVYQIMEPFACNYFSIDSRTGAIQTLSNLDYEQRRIFNFRVQVHDTGNP 1849



 Score = 43.9 bits (102), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 42/139 (30%), Positives = 61/139 (43%), Gaps = 10/139 (7%)

Query: 97   ISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
            +++ + LD E  D Y   + ATD      A V I+V++ ND  P      Y   +P    
Sbjct: 2969 VAVSKTLDREERDFYLLNITATDGTFVAKAAVEITVLDANDNSPVCEKDVYAQAVPE--- 3025

Query: 157  ADLTPGSVIGKVEAADGD--KGDRVTLSLRGPYEKMFSINDSGHISIVDLSALN---TST 211
             D+  G  I +V A D D      +T  L G   + F+I DS   ++  L+ L+   T  
Sbjct: 3026 -DVLIGKHILQVSATDADIQSNAEITYQLSGSGAESFTI-DSKTGAVKTLATLDREVTDV 3083

Query: 212  IQLVVVATDTGNPPRQASV 230
              L V A D  N   QAS+
Sbjct: 3084 YNLTVRAVDKDNHFCQASL 3102



 Score = 43.1 bits (100), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 54/199 (27%), Positives = 90/199 (45%), Gaps = 17/199 (8%)

Query: 45   FSKNEYSVSALENLPVNYVLLTV-TTNKPRDL--RVKYWLS--NDYGERFSISRQGDISL 99
            F + EY  +  E++ +   LL V   +K R +  ++ Y  S  N+ G     S+ GDI +
Sbjct: 3221 FERREYISTVPEDVTIGTKLLKVFAASKDRQMTSQITYSFSSGNEQGAFRIDSQTGDIFV 3280

Query: 100  MQCLDYETEDSYRFTVYAT---DTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
            M+ LDYE    +  TV AT      ++  ATV+I + ++ND  P F    Y   +     
Sbjct: 3281 MEPLDYEESSQHYLTVKATVGGKQSLSDMATVSIHLQDINDNSPVFSQKIYSAVVSE--- 3337

Query: 157  ADLTPGSVIGKVEA--ADGDKGDRVTLSLRGPYEKMFSIND--SGHISIV-DLSALNTST 211
             D    S +  V A   DG   +++  S+    +    I D  SG + +   L     ++
Sbjct: 3338 -DTRLASTVLTVLANDLDGPLNNQIRYSIEESNQSCPFIMDAVSGELQLARQLDREMVAS 3396

Query: 212  IQLVVVATDTGNPPRQASV 230
              L V+A+D+G+P +  S 
Sbjct: 3397 YMLTVMASDSGSPLKSDSA 3415



 Score = 42.4 bits (98), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 28/72 (38%), Positives = 35/72 (48%), Gaps = 8/72 (11%)

Query: 89   FSI-SRQGDISLMQCLDYETEDSYRFTVYATDT-----LMTTSATVNISVVNVNDWDPRF 142
            FSI SR G I  +  LDYE    + F V   DT         +A V I ++N+ND  P+F
Sbjct: 1814 FSIDSRTGAIQTLSNLDYEQRRIFNFRVQVHDTGNPRLFAQDTANVTIHIININDCAPKF 1873

Query: 143  RYPQYE--LFLP 152
                YE  L LP
Sbjct: 1874 TQDSYEATLLLP 1885



 Score = 40.4 bits (93), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 30/93 (32%), Positives = 44/93 (47%), Gaps = 9/93 (9%)

Query: 111  YRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTP-GSVIGKVE 169
            Y   +  TD +   SA  NI V+  N   P F   +Y      I LA+ +P G+++G+VE
Sbjct: 2454 YSLILSVTDGVFCASAEANIYVMGENSHSPSFTQDEY-----LIELAENSPVGTLVGQVE 2508

Query: 170  AADGDKGDRVTLS---LRGPYEKMFSINDSGHI 199
            A D D G    L+   +       F+IN+ G I
Sbjct: 2509 AIDEDPGKYGQLTFFIMNDIARDKFNINEDGQI 2541



 Score = 38.9 bits (89), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 57/202 (28%), Positives = 88/202 (43%), Gaps = 28/202 (13%)

Query: 53   SALENLPVNYVLLTVTTNKP---RDLRVKYWLSNDYG-ERFSISRQ-GDISLMQCLDYET 107
            + LE+  V   +L V  +     RD  V+Y +    G   F+I+ + G I+  + LD ET
Sbjct: 1041 TVLEDASVGTSVLKVAAHDEDSGRDGEVRYSIRGGSGLGVFTINEESGIITTQEILDRET 1100

Query: 108  EDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSV 164
             + Y  TVYATD     +++   V I V +VND  P    P Y    P +        SV
Sbjct: 1101 NNHYWLTVYATDQGIVPLSSFVEVYIEVQDVNDNAPLTTEPVY---FPSVSENSPKGVSV 1157

Query: 165  IGKVEAADGDKGDRVTLSLRGPYEKMFSINDSGHISIVDLSALNTSTIQ----------- 213
            I +++A D D      LS      K+ S N  G  +I   + L T+T +           
Sbjct: 1158 I-QIQAFDLDSESSENLSY-----KISSGNPQGFFAIDFQTGLVTTTSRKLDREKQAEHL 1211

Query: 214  LVVVATDTGNPPRQASVPAIMH 235
            L +  +D G+P +   V  I++
Sbjct: 1212 LEITVSDDGSPSKSTVVHVIVN 1233



 Score = 38.5 bits (88), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 39/139 (28%), Positives = 63/139 (45%), Gaps = 9/139 (6%)

Query: 24  DRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLR---VKYW 80
           DR A   ++VS +  +     F K+ Y  S  E++P+   +LTV+     D     V Y 
Sbjct: 441 DRRASTKVVVSVSDMNNNAPVFQKSNYEASIAEHVPIGTSVLTVSATDMDDGENGYVTYS 500

Query: 81  LSNDYGERFSISR-QGDISLMQCLDYETEDS-YRFTVYATDT----LMTTSATVNISVVN 134
           + N   + F +    G IS  + LDYET  S +   + A+D            V+IS+ N
Sbjct: 501 IVNVNKQPFVVDYFTGVISTTEDLDYETMPSKFSLRIRASDWGSPFRREAETIVSISLTN 560

Query: 135 VNDWDPRFRYPQYELFLPH 153
           +ND  P+F     ++ +P 
Sbjct: 561 LNDNKPQFENIDCDVRVPR 579


>gi|443694652|gb|ELT95736.1| hypothetical protein CAPTEDRAFT_182594 [Capitella teleta]
          Length = 2682

 Score = 62.0 bits (149), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 67/248 (27%), Positives = 110/248 (44%), Gaps = 32/248 (12%)

Query: 9   QPITLVVRAIQYDNQDRYAL-------------ATLIVSKAGTSLRELQFSKNEYSVSAL 55
           Q +  V R + +  + RY L             AT+ ++ +  +     F +  Y+V   
Sbjct: 513 QGLITVARPLNFKEKSRYILTVTASDPGNLVDTATVFINVSDANTYRPVFQETPYTVRVD 572

Query: 56  ENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGERFSISRQ-GDISLMQCLDYETEDSY 111
           E+  V   +  VT    +   + R+ Y +  D  E F+I  + G+I + + LD E   SY
Sbjct: 573 EDTSVGTTIFQVTATDLDSGDNARISYTM--DESEMFAIDVETGEIFIKEGLDRELTPSY 630

Query: 112 RFTVYATDTLMTTSAT---VNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKV 168
             +V ATD    + A    + I+V ++ND DP+F  P+Y   +      D   G+ I K+
Sbjct: 631 TLSVTATDHGRPSKADTTDIEITVADINDNDPKFLEPKYTGRVDE----DAFVGTSILKI 686

Query: 169 EAADGDKG--DRVTLSLRGPY--EKMFSINDS-GHISIVD-LSALNTSTIQLVVVATDTG 222
            A D D G   RV  +  G +  +  FSI+ + G I   + L     ++ +L   A D G
Sbjct: 687 SATDADSGLNGRVRYTFEGGFSGDGHFSIDPTLGVIRTAESLDREKVASYELRAFAVDRG 746

Query: 223 NPPRQASV 230
           +P R  SV
Sbjct: 747 SPERSVSV 754



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 69/235 (29%), Positives = 108/235 (45%), Gaps = 22/235 (9%)

Query: 13  LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTT--- 69
           L + A  Y +  + A A+LI+     +     F +  Y     E+  +   ++TV     
Sbjct: 105 LQIIASDYGHPSQSAYASLIIYVDDINDHAPLFEQKSYQRDVTESSSIGSTIITVRASDE 164

Query: 70  NKPRDLRVKYWLSNDYG--ERFSIS-RQGDISLMQCLDYETEDSYRFTVYATDTLM---- 122
           +   +  ++Y + N  G  E F+I  R G I+  + LD E   SY   V A+D  M    
Sbjct: 165 DSGHNGEIEYSILNPSGPNEVFNIDPRVGSITTNKKLDREKHASYTLQVQASDKAMVIER 224

Query: 123 -TTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDR--V 179
            T    V I+V++ ND  P+F    Y + +      D+  G VI +V+A D D GD   V
Sbjct: 225 KTEVVQVQINVLDENDNKPQFSQSSYTVDVRED--VDIAGGPVILEVKATDADAGDNGLV 282

Query: 180 TLSLRGP-YEKMFSIND-SGHISI---VDLSALNTSTIQLVVVATDTGNPPRQAS 229
             S+ G   +  F IND SG +S+   +D   +N  + +L V A D+G+P R  S
Sbjct: 283 RYSITGGNIQDTFYINDISGELSLRKPLDYERMN--SYRLNVRAQDSGSPHRSNS 335



 Score = 51.2 bits (121), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 58/210 (27%), Positives = 96/210 (45%), Gaps = 35/210 (16%)

Query: 44  QFSKNEYSVSALENL-----PVNYVLLTVTTNKPRDLRVKYWLSN-DYGERFSISR-QGD 96
           QFS++ Y+V   E++     PV   +     +   +  V+Y ++  +  + F I+   G+
Sbjct: 244 QFSQSSYTVDVREDVDIAGGPVILEVKATDADAGDNGLVRYSITGGNIQDTFYINDISGE 303

Query: 97  ISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
           +SL + LDYE  +SYR  V A D+     + S TV + V++VND  PRF    Y+  +  
Sbjct: 304 LSLRKPLDYERMNSYRLNVRAQDSGSPHRSNSTTVLVRVIDVNDNSPRFYTSLYQEAV-- 361

Query: 154 IPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDS------------GHISI 201
             L ++  G  I +V+A D D G    L        ++SI+D+            G ++ 
Sbjct: 362 --LENVAVGYTIMRVQAYDSDSGLNSAL--------VYSIHDAIDDLPIEIDTQTGALTT 411

Query: 202 V-DLSALNTSTIQLVVVATDTGNPPRQASV 230
           V +L           V A D G+P R A+ 
Sbjct: 412 VKELDREKHERFSFRVEARDQGDPVRSANA 441



 Score = 38.5 bits (88), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 29/96 (30%), Positives = 54/96 (56%), Gaps = 9/96 (9%)

Query: 148 ELFLPHIPLADLTPGSVIGKVEAADGDKGD--RVTLSL----RGPYEKMFSIN-DSGHIS 200
           +L++ ++P  + +PG  I  + A+D D+GD  R+T SL     G  + MF+I+  SG ++
Sbjct: 32  QLYVKNVP-EEQSPGFTIDTITASDPDEGDAGRLTYSLLATRDGRSQNMFTIDPSSGQLT 90

Query: 201 IVD-LSALNTSTIQLVVVATDTGNPPRQASVPAIMH 235
               L   + +T  L ++A+D G+P + A    I++
Sbjct: 91  TTQSLDRESIATHHLQIIASDYGHPSQSAYASLIIY 126


>gi|260830788|ref|XP_002610342.1| hypothetical protein BRAFLDRAFT_72456 [Branchiostoma floridae]
 gi|229295707|gb|EEN66352.1| hypothetical protein BRAFLDRAFT_72456 [Branchiostoma floridae]
          Length = 3154

 Score = 62.0 bits (149), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 67/212 (31%), Positives = 100/212 (47%), Gaps = 28/212 (13%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDL----RVKYWLSNDYGERFSIS-RQGDISL 99
            FS  +Y  S LEN P    +L V     RD     RV+Y LS   G RF+I   QG+I+L
Sbjct: 1947 FSLKKYQASVLENQPAGTEVLRVEATD-RDSGSYGRVQYHLSG-AGGRFAIHPDQGNITL 2004

Query: 100  MQCLDYETEDSYRFTVYATDTL-------MTTSATVNISVVNVNDWDPRFRYPQYELFLP 152
               LD E +  +  +V ATD            S  V ++V++ ND  P     +++  +P
Sbjct: 2005 TTPLDREEQTDFLLSVTATDNTDGLPSNSRENSVQVVVTVLDENDNTPEPSTSKFDFRVP 2064

Query: 153  HIPLADLTPGSVIGKVEAADGDKGD--RVTLSL--RGPYEKM-FSI-NDSGHISIVDLSA 206
                A    G  +G + A+D D+GD  R+  S+  + P   M F I N +G IS   L  
Sbjct: 2065 ENQPA----GEYVGTILASDRDEGDNGRLQFSILKQEPNHVMLFDIENTTGVISSARLLD 2120

Query: 207  LNT----STIQLVVVATDTGNPPRQASVPAIM 234
              T      ++L +  +D G+PPR +S  A++
Sbjct: 2121 RETMGYNGIVELTIQISDLGSPPRMSSTKAVI 2152



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 68/215 (31%), Positives = 105/215 (48%), Gaps = 20/215 (9%)

Query: 27   ALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLR-VKYWLSNDY 85
              AT+++  A  +    +F+   Y  +  EN+ V   +L V    P +L  ++Y    + 
Sbjct: 891  GYATVVIVLANENDEPPEFNAEHYDAAVSENVDVGTSVLQVYATSPDNLAAIEYLFDPNT 950

Query: 86   GE----RFSIS-RQGDISLMQCLDYETEDSYRFTVYATDT-LMTTSATVNISVVNVNDWD 139
             E    RFSI+   G IS ++ +D E    Y  TV +TD  + T SATV+I +++ ND  
Sbjct: 951  NEEVLRRFSINGSTGLISTIEEIDREEAAQYDITVISTDGGIETDSATVSIVILDENDNF 1010

Query: 140  PRFR-YPQYELFLPHIPLADLTP-GSVIGKVEAADGDKGD--RVTLSL-RGPYEKMFSIN 194
            P+F  + Q ++ +   P   LTP GS I +V A D D  D  RV  ++  G   + F I 
Sbjct: 1011 PKFNIFSQTDVSVTEGP---LTPNGSDIARVIARDPDDADNGRVEYTIEEGNDLEYFKIE 1067

Query: 195  --DSGHISIVDLSALN---TSTIQLVVVATDTGNP 224
              +SG   I +L  L+       +L VVA D G+P
Sbjct: 1068 KTESGDGIIRNLHPLDREEQEEYKLRVVACDQGSP 1102



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 65/227 (28%), Positives = 103/227 (45%), Gaps = 39/227 (17%)

Query: 22  NQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDL----RV 77
           N ++Y  AT+ ++    +     F+++ YS+S  EN+P+   LL V+ +  RD+     V
Sbjct: 375 NGEKYGHATITITLINENDHRPTFTQSTYSLSVEENIPIGTSLLNVSASD-RDIGEFGDV 433

Query: 78  KYWLSNDYGERFSI-SRQGDISLMQCLDYETEDSYRF--TVYATDTL---MTTSATVNIS 131
            Y++ ND   RF I    G I  +  LDY  ED++RF  T+ A D       T+A V I 
Sbjct: 434 TYFI-NDDDPRFRIDGNTGVIYTLDQLDY--EDAWRFSLTIIAQDGGTPPQQTAARVRID 490

Query: 132 VVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAAD---------------GDKG 176
           +V++ND  P F+   Y +       A  TP   I +V A D               GD  
Sbjct: 491 IVDLNDNRPIFQRDDY-VGTVRENEASQTP---ILRVRATDEDSPPYNILVYNITSGDSL 546

Query: 177 DRVTLSLRGPYEKMFSINDSGHISIVDLSALNTSTIQLVVVATDTGN 223
              T+S    Y  +++       + +D   +  +  +L+V ATD GN
Sbjct: 547 HNFTISTEDGYGYIYT------SAPLDYEMMTGNLFELMVTATDGGN 587



 Score = 47.0 bits (110), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 51/184 (27%), Positives = 86/184 (46%), Gaps = 17/184 (9%)

Query: 50   YSVSALENLPVNYVLLTV---TTNKPRDLRVKYWLSND--YGERFSISRQ--GDISLMQC 102
            Y    LE +PV  V++++     +K ++  + Y + N     E F+I  +  G I++ + 
Sbjct: 1845 YQERILEEVPVGTVVMSIIATDADKGKNGIITYRIVNGSLATEFFAIRDKYLGTITVSRP 1904

Query: 103  LDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADL 159
            +D+E      FTV A D    + T    V+I +V++ND +P F   +Y+  +    L + 
Sbjct: 1905 VDHEQHQWVNFTVQAADEGKPVRTADIPVSIEIVDINDNNPIFSLKKYQASV----LENQ 1960

Query: 160  TPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSINDSGHISIVD-LSALNTSTIQLVV 216
              G+ + +VEA D D G   RV   L G   +     D G+I++   L     +   L V
Sbjct: 1961 PAGTEVLRVEATDRDSGSYGRVQYHLSGAGGRFAIHPDQGNITLTTPLDREEQTDFLLSV 2020

Query: 217  VATD 220
             ATD
Sbjct: 2021 TATD 2024



 Score = 45.8 bits (107), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 44/157 (28%), Positives = 71/157 (45%), Gaps = 28/157 (17%)

Query: 20   YDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTT-NKPRDLRVK 78
            Y  Q  Y+LA       GTS+  L          AL++   N +  ++T  N+ RD  V 
Sbjct: 2163 YFQQSSYSLAVREDEYGGTSILGL---------VALDDDEGNVLTYSITAGNEHRDFAVG 2213

Query: 79   YWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDT-LMTTSATVNISVVNVND 137
                         +  G + + + LD+ET  +Y  TV A D      S T+ + +++VND
Sbjct: 2214 -------------ASTGHVIVAKSLDHETRPAYTLTVTAFDQDGRNGSTTLLVKILDVND 2260

Query: 138  WDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGD 174
              P F    Y + +    + D+ PG+++G+VEA D D
Sbjct: 2261 NPPVFSQDVYRVEV----MEDIQPGALVGQVEATDAD 2293



 Score = 44.7 bits (104), Expect = 0.071,   Method: Compositional matrix adjust.
 Identities = 59/242 (24%), Positives = 109/242 (45%), Gaps = 26/242 (10%)

Query: 10  PITLVVRAIQYDNQDR----YALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVL- 64
           P+T+ V+A++    D     +   T  ++    +     F ++EYS++  E+  V   L 
Sbjct: 249 PLTITVQALEIPTGDSPGGAFIRTTFDIAIIDVNDETPTFDQSEYSITVSESTLVGAALP 308

Query: 65  LTVTTNKPRDLRVKYWLSNDYG---ERFSIS---RQGDISLM----QCLDYETEDSYRFT 114
           LT+  N P +     ++ +  G    +F +S     G+ ++     + LDYE E  +   
Sbjct: 309 LTLQVNDPDEEENGAYMLHLVGLTAPQFLVSPSSAMGEAAITLRVNKPLDYEVEQMHLLE 368

Query: 115 VYATDT--LMTTSATVNISVVNVNDWDPRFRYPQYELFL-PHIPLADLTPGSVIGKVEAA 171
           ++A +T       AT+ I+++N ND  P F    Y L +  +IP+     G+ +  V A+
Sbjct: 369 IFANETNGEKYGHATITITLINENDHRPTFTQSTYSLSVEENIPI-----GTSLLNVSAS 423

Query: 172 DGDKGD--RVTLSLRGPYEKMFSINDSGHISIVD-LSALNTSTIQLVVVATDTGNPPRQA 228
           D D G+   VT  +     +     ++G I  +D L   +     L ++A D G PP+Q 
Sbjct: 424 DRDIGEFGDVTYFINDDDPRFRIDGNTGVIYTLDQLDYEDAWRFSLTIIAQDGGTPPQQT 483

Query: 229 SV 230
           + 
Sbjct: 484 AA 485



 Score = 40.0 bits (92), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 55/207 (26%), Positives = 83/207 (40%), Gaps = 25/207 (12%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTN---KPRDLRVKYWL-SNDYGERFSIS-RQGDISL 99
            F    Y     EN PV+ ++  V+ N   +  +  + Y + S + G+ F I+   G+I +
Sbjct: 1450 FQDLPYYCRVSENAPVDTLVFKVSANDTDEGNNAFITYSITSGNIGQVFRINGTNGEIYV 1509

Query: 100  MQCLDYETEDSYRFTVYATDT------LMTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
               LD E    Y  TV A D       +   +  V I+V++ ND  PRF  P Y   +  
Sbjct: 1510 NGLLDREVIPQYTLTVTARDNPQNPTHVRRDTTQVYITVIDENDQRPRFTQPLYRGRISE 1569

Query: 154  IPLADLTPGSVIGKVE-----AADGDKGDRVTLSLRGPYEKMFSIND-SGHISIVDLSAL 207
               A    G+ +   E      AD      V  S+ G   + F I+   G + + D S L
Sbjct: 1570 NSQA----GTAVDMSEDILAVDADATTNAEVHYSIFGKDARFFRIDSVKGELFVRDGSLL 1625

Query: 208  NTSTI----QLVVVATDTGNPPRQASV 230
            +  TI       V+A D G     A V
Sbjct: 1626 DRETIGNDLSFTVMAADPGGLNESAGV 1652



 Score = 38.9 bits (89), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 26/72 (36%), Positives = 38/72 (52%), Gaps = 4/72 (5%)

Query: 80  WLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVN 136
           ++S D G +F+I   G I+    LD+E+  +Y  +VYA+D      T  ATV I + N N
Sbjct: 845 FVSGDRG-KFAIDESGLITTSAELDFESWRNYTISVYASDRAPPYNTGYATVVIVLANEN 903

Query: 137 DWDPRFRYPQYE 148
           D  P F    Y+
Sbjct: 904 DEPPEFNAEHYD 915



 Score = 38.1 bits (87), Expect = 7.1,   Method: Compositional matrix adjust.
 Identities = 32/113 (28%), Positives = 51/113 (45%), Gaps = 8/113 (7%)

Query: 126  ATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR- 184
            A V IS+++ ND  P F+ P    +   I L ++  G+V+  + A D DKG    ++ R 
Sbjct: 1821 AQVTISIIDENDNTPTFQPPGVAFYQERI-LEEVPVGTVVMSIIATDADKGKNGIITYRI 1879

Query: 185  ---GPYEKMFSINDS--GHISIVD-LSALNTSTIQLVVVATDTGNPPRQASVP 231
                   + F+I D   G I++   +       +   V A D G P R A +P
Sbjct: 1880 VNGSLATEFFAIRDKYLGTITVSRPVDHEQHQWVNFTVQAADEGKPVRTADIP 1932


>gi|341901481|gb|EGT57416.1| hypothetical protein CAEBREN_30656, partial [Caenorhabditis
           brenneri]
          Length = 1294

 Score = 62.0 bits (149), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 56/178 (31%), Positives = 83/178 (46%), Gaps = 11/178 (6%)

Query: 56  ENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTV 115
           EN P N V++++  +  +DL     +  +   +F+I   G I     LD E    Y   V
Sbjct: 310 ENTPANTVVVSLGDDSSKDLTYFNIVGGNEEGKFAIDDAGTIVTADELDREKTAMYSLQV 369

Query: 116 YATDT-----LMTTSATVNISVVNVNDWDPRFRYPQ-YELFLPHIPLADLTPGSVIGK-- 167
                     L  T   V ++V++VND  P F  PQ   L L    +  LT   +IGK  
Sbjct: 370 ETRSRNPDQHLYWT--LVQVTVMDVNDNAPIFTDPQPIRLRLSIDDIEQLTANMIIGKIG 427

Query: 168 VEAADGDKGDRVTLSLRGPYEKMFSINDSGHISI-VDLSALNTSTIQLVVVATDTGNP 224
           VE AD D   R+ L +  P+ K+F+I++ G +S+  D +A +     L VVA D G P
Sbjct: 428 VEDADADDNGRLELRIMPPHNKLFAISNEGILSVNGDFTAAHFGEHDLTVVARDHGEP 485



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 46/164 (28%), Positives = 73/164 (44%), Gaps = 19/164 (11%)

Query: 77  VKYWLSNDYGERFSISR-QGDISLMQCLDYETEDSYRFTVYAT-------DTLMTTSATV 128
           + Y L       FS+S   G ++L++ LD E   +    V  +       D  +    ++
Sbjct: 783 ITYVLHKGDPAHFSVSSYSGSVNLLKPLDAEANSTVTIQVSTSEAQSLDVDPKLAHFVSI 842

Query: 129 NISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGD-----RVTLSL 183
            I+V + NDW P F    YE  +      D  PG+++G+V A D D+ D     R  L  
Sbjct: 843 TINVADKNDWIPNFESASYEFDVKE----DTLPGTIVGQVNAFDQDRDDPNNRIRYRLLS 898

Query: 184 RGPYEKMFSIN-DSGHISIV-DLSALNTSTIQLVVVATDTGNPP 225
            G  E  F++N +SG I++   + A     I L +   D+G PP
Sbjct: 899 AGGLEAHFNVNAESGLITLARPIDAFAGEKITLRIEGADSGTPP 942



 Score = 48.9 bits (115), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 55/173 (31%), Positives = 77/173 (44%), Gaps = 15/173 (8%)

Query: 42   ELQFSKNEYSVSALENL-PVNYVLLTVTTNKPRDLR--VKYWLSNDYGERFSISRQGD-- 96
            ELQFS   Y+ S  E + P + V +    NKP D R  +   +S +Y   F ++   D  
Sbjct: 975  ELQFSLRNYTASVSEAVRPPHLVQVLSVMNKPTDTRFIICNIVSGNYRGAFGVTAGNDGN 1034

Query: 97   --ISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHI 154
              +     LD ET + Y   V  T    T  A V+I+V++VND  PRF Y   +L L   
Sbjct: 1035 CELRTQMELDRETVERYLLNVTVTAGTQTDYALVSITVLDVNDNVPRFVY-DSDLGLTTY 1093

Query: 155  PLADLTPGSVIGK---VEAADGDKGD----RVTLSLRGPYEKMFSINDSGHIS 200
              A  +  +   +   V+A D D G+       L    P  K FSI+  G IS
Sbjct: 1094 FGAVSSVANAFTRVLTVKAEDADLGNSSLVNYALDPLSPQSKYFSISPFGEIS 1146


>gi|410919675|ref|XP_003973309.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 2-like
           [Takifugu rubripes]
          Length = 2988

 Score = 62.0 bits (149), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 65/227 (28%), Positives = 102/227 (44%), Gaps = 20/227 (8%)

Query: 15  VRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTT---NK 71
           V A+ +    R A+ATL V+   T+  +  F + +Y  +  ENL + Y +LTV     + 
Sbjct: 338 VTAVDHGVPRRTAMATLTVTVGDTNDHDPAFEQQDYKENIRENLEIGYEVLTVRATDGDA 397

Query: 72  PRDLRVKYWLSNDYGER--FSI-SRQGDISLMQCLDYETEDSYRFTVYATDTL-----MT 123
           P +  + Y + N  G    F I SR G I     +D E  ++Y   V A D        +
Sbjct: 398 PVNGNILYRIINSNGSNDVFEIDSRSGVIRTKGLVDREQVEAYMLLVEANDQGRDPGPRS 457

Query: 124 TSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS- 182
            +ATV+I V + ND  P+F   +Y + +P     D+ P + I +V A D D+G    +  
Sbjct: 458 ATATVHIVVEDDNDNAPQFSEKRYVVQVPE----DMAPNTEILQVTATDQDRGSNAVVHF 513

Query: 183 --LRGPYEKMFSIN-DSGHISIVD-LSALNTSTIQLVVVATDTGNPP 225
             + G     F I+  +G + +V  L         L + A D G PP
Sbjct: 514 SIMSGNTRGQFYIDAQTGKMDLVSHLDYETNKEYTLRIRAQDGGRPP 560



 Score = 45.8 bits (107), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 51/192 (26%), Positives = 91/192 (47%), Gaps = 20/192 (10%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKP---RDLRVKYWL-SNDYGERFSIS-RQGDISL 99
            F K+E  +   EN P+  V+  V+   P    + ++ Y +   +  E F +    G+++ 
Sbjct: 998  FEKDELDIMVEENSPIGLVVGHVSATDPDEGSNAQIMYQIVEGNIPEVFQLDIFSGELTS 1057

Query: 100  MQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADL 159
            +  LDYET++ Y   V AT   + + ATV+I +V+ ND  P  +  Q  +F  ++     
Sbjct: 1058 LIDLDYETKNEYVIVVQATSAPLVSRATVHIKLVDKNDNVPVLKNFQI-IFNNYVTDKSS 1116

Query: 160  T-PGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSGHISIVDLSALNTSTIQLVVVA 218
            + P  VIG++ A D D  D++  S        F + +      ++L  LN ST ++ +  
Sbjct: 1117 SFPTGVIGRIPAYDPDVSDQLHYS--------FEVGNE-----LNLVLLNQSTGEIQLSQ 1163

Query: 219  TDTGNPPRQASV 230
                N P +AS+
Sbjct: 1164 ALDNNRPLEASM 1175



 Score = 44.3 bits (103), Expect = 0.098,   Method: Compositional matrix adjust.
 Identities = 49/191 (25%), Positives = 92/191 (48%), Gaps = 12/191 (6%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTT-NKPRDLRVKYWLSN-DYGERFSISRQ---GDIS 98
           +F++  Y +   E+  V   ++TV+  ++  +  V Y +S+ +   RFSI+ Q   G I+
Sbjct: 686 EFTQKAYYMRLNEDAAVGTSVVTVSAVDQDINSVVTYQISSGNTRNRFSITSQSGGGLIT 745

Query: 99  LMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLAD 158
           L   LDY+ E  Y  TV A+D  +  +A V ++V + N   P F+   Y + +      D
Sbjct: 746 LALPLDYKLERQYVLTVTASDGTLFDTAKVFVNVTDANTHRPVFQSSHYTVNINE----D 801

Query: 159 LTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSINDSGHISI-VDLSALNTSTIQLV 215
            + G+ +  + A D D G+  R+T  +     +     D+G ++  ++L   +  +  L 
Sbjct: 802 RSVGTTVVLISATDEDTGENARITYFMDDSIPQFDIDPDTGAVTTQMELDYEDQVSYTLA 861

Query: 216 VVATDTGNPPR 226
           + A D G P +
Sbjct: 862 ITARDNGIPQK 872


>gi|344279310|ref|XP_003411432.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin-7-like [Loxodonta
           africana]
          Length = 1089

 Score = 62.0 bits (149), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 53/165 (32%), Positives = 76/165 (46%), Gaps = 11/165 (6%)

Query: 73  RDLRVKYWLSNDYGERFSIS-RQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATV 128
           ++  V Y L +     F+I    GDI +   LD E  D Y F V A D    ++  S TV
Sbjct: 400 KNAEVAYSLDSSVMGIFAIDPNSGDILVNTVLDREQTDRYEFKVNAQDKGIPVLQGSTTV 459

Query: 129 NISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR-GPY 187
            + V + ND DP+F    +  ++      +L P S +G V   D DKG    + L     
Sbjct: 460 IVQVADRNDNDPKFMQDVFTFYVKE----NLQPNSPVGMVTVMDADKGKNSEMRLYIEEN 515

Query: 188 EKMFSI-NDSGHI-SIVDLSALNTSTIQLVVVATDTGNPPRQASV 230
             +FSI ND+G I S +     + +T    V A D G+PPR A+ 
Sbjct: 516 SSIFSIENDTGTIYSTMSFDREHQTTYTFRVKAVDGGDPPRSATA 560



 Score = 45.1 bits (105), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 78/318 (24%), Positives = 138/318 (43%), Gaps = 50/318 (15%)

Query: 30  TLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVT---TNKPRDLRVKYWLSNDYG 86
           T+IV  A  +  + +F ++ ++    ENL  N  +  VT    +K ++  ++ ++  +  
Sbjct: 458 TVIVQVADRNDNDPKFMQDVFTFYVKENLQPNSPVGMVTVMDADKGKNSEMRLYIEEN-S 516

Query: 87  ERFSISRQ-GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRF 142
             FSI    G I      D E + +Y F V A D      + +ATV++ V++ ND  P  
Sbjct: 517 SIFSIENDTGTIYSTMSFDREHQTTYTFRVKAVDGGDPPRSATATVSLFVMDENDNAPTV 576

Query: 143 RYPQ---YELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIND- 195
             P+   Y L  P   +      +V+  V A D D G    L+   + G   K+F I+  
Sbjct: 577 TLPRNISYTLLPPSSNVR-----TVVATVLATDSDDGINADLNYSIVGGNPFKLFEIDST 631

Query: 196 SGHISIV-DLSALNTSTIQLVVVATDTGNPPRQASVPAIMHF--------PEAIVQQASS 246
           SG +S+V  L+  +    +LVV   D+G P +  S  A++H            I  Q + 
Sbjct: 632 SGVVSLVGKLTQKHYGLHRLVVQVNDSGQPSQ--STTALVHVFVNESVSNATVIDSQIAR 689

Query: 247 KLNSGTSSTVL-------------IILGVVLIVLGFVIILLILYIHKNKHTKN-NGPPGS 292
            L++  +  +              I++GVV  ++  ++I+LI+ + +   +KN NG    
Sbjct: 690 SLHTPLTQDIAGDPSYEISKQRLSIVIGVVAGIMTVILIILIVVMARYCRSKNKNGYEAG 749

Query: 293 SHSKNDSFLSNVILPEKH 310
                D F      P++H
Sbjct: 750 KKDHEDFF-----TPQQH 762


>gi|195160152|ref|XP_002020940.1| GL16483 [Drosophila persimilis]
 gi|194117890|gb|EDW39933.1| GL16483 [Drosophila persimilis]
          Length = 5086

 Score = 62.0 bits (149), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 54/193 (27%), Positives = 87/193 (45%), Gaps = 23/193 (11%)

Query: 50   YSVSALENLPVNYVLLTVTTNK---PRDLRVKYWLSNDYGERFSIS-RQGDISLMQCLDY 105
            +S++  EN  +   ++ VT++     ++    Y  S + GE+F I    G+I++   LD 
Sbjct: 2824 FSLNVTENAEIGSFVIRVTSSDLDLGQNANATYSFSANPGEKFKIEPLSGNITVAGHLDR 2883

Query: 106  ETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVI 165
            E ED Y   V A+D        + I++ + ND  P F +  Y    P +    L P +++
Sbjct: 2884 EQEDEYILKVVASDGAWRAETPITITIQDQNDNAPEFEHSFYSFSFPEL----LHPVALV 2939

Query: 166  GKVEAADGDK---GDRVTLSLRGPYEKMFSINDSGHISIVDLSALNTSTIQ--------- 213
            G++ A D DK      ++ SL+ P   MFSI D     I    A+     Q         
Sbjct: 2940 GQIIATDRDKLGPNSVISYSLQQP-SPMFSI-DPATGEIFSKKAIQYKRSQYVRSPENMY 2997

Query: 214  -LVVVATDTGNPP 225
             L ++ATD G PP
Sbjct: 2998 ALTILATDNGKPP 3010



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 55/202 (27%), Positives = 94/202 (46%), Gaps = 20/202 (9%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVT-TNKPRDL--RVKYWLSNDYGERFSI-SRQGDISLM 100
            F    Y  S  ENLP+  ++L  T T+K   L  ++++ L  ++  RF I +  G I+  
Sbjct: 2398 FELQSYHASIQENLPIGTLVLQPTATDKDAGLNAKLRFNLLGEHMARFHIDTDTGVITTA 2457

Query: 101  QCLDYETEDSYRFTVYATDTLMT----TSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
              LD E    Y  T+ A D+ +T    +S  + I+V +VND +P+F    Y + +P    
Sbjct: 2458 TVLDREETAVYHLTLMAQDSSITEPRASSVNLTITVGDVNDNEPKFESGSYSIAVPD--- 2514

Query: 157  ADLTPGSVIGKVEAADGDKGDRVTL--SLRGPYEKMFSIN-DSGHISI-----VDLSALN 208
              +  G  +    A D D+GD   +  S+ G  ++ F +N  +G IS      +   +  
Sbjct: 2515 -RIAAGEFVFGARAVDLDEGDNAVIHYSISGRDQEFFEVNFKTGAISTSLELKIRKKSPG 2573

Query: 209  TSTIQLVVVATDTGNPPRQASV 230
             +   +V+ ATD G   + +S 
Sbjct: 2574 DTIYSIVMQATDQGQTQQTSSA 2595



 Score = 52.0 bits (123), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 48/162 (29%), Positives = 82/162 (50%), Gaps = 17/162 (10%)

Query: 45   FSKNEYSVSALENLPVN-YVLLTVTTNK--PRDLRVKY-WLSNDYGERFSI--SRQGDIS 98
            F+++EY     EN PV  +V     T+K  P++  V Y +L +     F +  S  G IS
Sbjct: 3243 FNQSEYHGYVAENKPVGTFVFQAHATDKDSPKNAIVHYSFLPSGTDRHFFLMNSSNGTIS 3302

Query: 99   LMQCLDYETEDSYRFTVYAT--DTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
                 DYE   ++   + A   D+ M + AT+ + ++ VN++ P+F  P +     H  +
Sbjct: 3303 SAATFDYEERRTFALQLKAKNPDSSMESYATLYVHILGVNEFYPQFLQPVF-----HFDV 3357

Query: 157  ADLTP-GSVIGKVEAADGDKGD--RVTLSLRGPY-EKMFSIN 194
            ++ +  G+++G V+A D D G+  RV   L G   +K F+IN
Sbjct: 3358 SETSAVGTIVGAVQATDKDSGEDGRVYYLLVGSSNDKGFAIN 3399



 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 56/219 (25%), Positives = 96/219 (43%), Gaps = 15/219 (6%)

Query: 15   VRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRD 74
            V AI    Q R A   + V+    +    QF +  ++ +  E+L + + + T+  + P  
Sbjct: 1695 VYAIALGGQPRTAHTKVKVTVLDKNDSPPQFLETPFAYNVSEDLEIGHTIATIRAHDPDT 1754

Query: 75   L-RVKYWLSNDYGERFSIS-RQGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISV 132
            L  VK+ L +    +F +    G + L   LD ET+  Y   +  +D +  T   + I V
Sbjct: 1755 LGTVKFLLIDGQDGKFQLEPTTGRLVLNDTLDRETKSKYDVRIRVSDGVQYTETYIAIEV 1814

Query: 133  VNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEK 189
             + ND  P F    Y   +P     +   G  +G+V A D D G    LS   +      
Sbjct: 1815 SDTNDNPPMFEESVYSFDIPE----NAPRGYQVGQVVARDADLGQNSQLSYGVVSDWAND 1870

Query: 190  MFSIN-DSGHISIVDLSALNTSTIQ---LVVVATDTGNP 224
            +FS+N  +G +++   + L+   +Q   L+V A D+G P
Sbjct: 1871 VFSLNPQTGMLTLT--ARLDYEEVQHYILIVQAQDSGQP 1907



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 58/197 (29%), Positives = 93/197 (47%), Gaps = 20/197 (10%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKY-WLSNDYGERFSISRQ-GDISL 99
            F   +YS S  EN  +  ++L V+    ++  + R++Y  ++ D  + FSIS   G + +
Sbjct: 2185 FDPKQYSASVAENASIGAMVLQVSATDVDEGANGRIRYSIMTGDQNQDFSISEDTGVVRV 2244

Query: 100  MQCLDYETEDSYRFTVYATDTLMTTSAT----VNISVVNVNDWDPRFRYPQY--ELFLPH 153
             + L+YE    Y  TV A D  +  SA+    + I ++++ND  P F    Y   +    
Sbjct: 2245 AKNLNYERNARYTLTVRAEDCAVENSASDTAELIIGILDINDNRPTFLDSPYLARVMENT 2304

Query: 154  IPLADLTPGSVIGKVEAADGDK---GDRVTLSLRGPYEKMFSINDS-GHISIV-DLSALN 208
            +P  D   G V+  V A D D      +V   L+     +F IN S G I+++  L    
Sbjct: 2305 VPPND---GYVL-TVNAYDADTPPLNSQVRYFLKEGDSDLFRINASTGAIALLKQLDRET 2360

Query: 209  TSTIQLVVVATDTGNPP 225
             S   L +VA DTG+PP
Sbjct: 2361 QSEYILTLVAMDTGSPP 2377



 Score = 46.2 bits (108), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 40/137 (29%), Positives = 60/137 (43%), Gaps = 4/137 (2%)

Query: 103  LDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPG 162
            LDYE   +Y   V A+D    +  +V +  +NV D +         ++   + L + +P 
Sbjct: 2675 LDYELTHAYEIWVEASDGDRPSLRSVMLVTINVTDANDNAPIMDKLIYNAEV-LEEESPP 2733

Query: 163  SVIGKVEAADGDKGD--RVTLSLRGPYEKMFSINDSGHI-SIVDLSALNTSTIQLVVVAT 219
             +I  V+A D D GD   V+  L   YE  F I DSG I + + L     S    VV A 
Sbjct: 2734 QLIAVVKARDRDSGDNGEVSYRLSNDYEGTFEITDSGEIYTTMRLDREELSDYAFVVEAV 2793

Query: 220  DTGNPPRQASVPAIMHF 236
            D G P    +   ++H 
Sbjct: 2794 DQGVPQLTGTASVLLHL 2810



 Score = 45.8 bits (107), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 62/247 (25%), Positives = 105/247 (42%), Gaps = 50/247 (20%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVT-------TNKPRDLRVKYWLSNDYGERFSI-SRQG 95
           QF + + +VS  E++    ++ T+T       TN      +   +   Y ++F+I S  G
Sbjct: 542 QFGQQQLNVSLSEDVAPQSLVCTLTATDHDQGTNGSVAFSLAPSVERLYQQQFAIDSITG 601

Query: 96  DISLMQCLDYETEDSYRFTVYATD----TLMTTSATVNISVVNVNDWDPRFRYPQYELFL 151
            ++  + LD ET  +Y   V A D    T  + +ATV +SV+++ND DP F YPQ+ ++ 
Sbjct: 602 QLTTRKTLDRETMANYEIFVIARDQGAPTPQSATATVYLSVLDINDNDPEF-YPQHYIYT 660

Query: 152 PHIPLADLTPG----------------SVIGKVEAADGDKGDR--VTLSLRGPYEKMFSI 193
               + D+  G                  +  V A D D+GD   +T +L    E +F +
Sbjct: 661 -FSDVDDIVDGHGQANEKENENGMAKERTLLHVTATDRDEGDNALITYTLESGGEGVFQV 719

Query: 194 NDSGHISIVDLSALNTSTIQLVVVATDTGNPPRQASVPAIMHFPEAIVQQASSKLNSGTS 253
           +   H   V L               D  +  R A+ P   H+   +  + S +  SG  
Sbjct: 720 D--AHSGAVMLRG-------------DIADRARTATKP---HYKLLVSARDSGQRRSGQD 761

Query: 254 STVLIIL 260
           + V I+L
Sbjct: 762 AVVDIVL 768



 Score = 45.4 bits (106), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 60/238 (25%), Positives = 103/238 (43%), Gaps = 22/238 (9%)

Query: 13  LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKP 72
           L V A+      R   A LI+     +  E  F K+EYS    E  P    + ++T    
Sbjct: 406 LTVVAMDRGTPARITTAHLIIDVNDVNDHEPVFEKSEYSAVLSELAPTGSYVASITATDE 465

Query: 73  R---DLRVKYW-LSNDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATD---TLMTT 124
               + +V Y  LS +  + FSI +  G I+    LD E +DS   ++ A D        
Sbjct: 466 DTGVNAQVHYEILSGNELKWFSIDAATGLIATAGALDREIKDSVELSISARDGGPNPKFA 525

Query: 125 SATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTL--- 181
              + ++V++ ND  P+F   Q  + L      D+ P S++  + A D D+G   ++   
Sbjct: 526 YTQLKVTVLDENDEAPQFGQQQLNVSLSE----DVAPQSLVCTLTATDHDQGTNGSVAFS 581

Query: 182 ---SLRGPYEKMFSINDSGHISIVDLSALNTSTI---QLVVVATDTGNPPRQASVPAI 233
              S+   Y++ F+I DS    +     L+  T+   ++ V+A D G P  Q++   +
Sbjct: 582 LAPSVERLYQQQFAI-DSITGQLTTRKTLDRETMANYEIFVIARDQGAPTPQSATATV 638



 Score = 42.7 bits (99), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 30/86 (34%), Positives = 42/86 (48%), Gaps = 7/86 (8%)

Query: 64   LLTVTTNKPRDL----RVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATD 119
            L+ V   + RD      V Y LSNDY   F I+  G+I     LD E    Y F V A D
Sbjct: 2735 LIAVVKARDRDSGDNGEVSYRLSNDYEGTFEITDSGEIYTTMRLDREELSDYAFVVEAVD 2794

Query: 120  T---LMTTSATVNISVVNVNDWDPRF 142
                 +T +A+V + +++ ND  P+F
Sbjct: 2795 QGVPQLTGTASVLLHLLDKNDNPPKF 2820


>gi|301755822|ref|XP_002913760.1| PREDICTED: LOW QUALITY PROTEIN: cadherin-23-like [Ailuropoda
            melanoleuca]
          Length = 3353

 Score = 62.0 bits (149), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 59/195 (30%), Positives = 90/195 (46%), Gaps = 20/195 (10%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWLSNDYGERFSIS-RQGDISLM 100
            F +  Y  +  E+ PV  V+LTVT           ++Y L +  G +F+I+   GDI ++
Sbjct: 2401 FDQPSYQEAVFEDAPVGTVILTVTATDADSGNFALIEYSLGDGEG-KFAINPTTGDIYVL 2459

Query: 101  QCLDYETEDSYRFTVYATDT-------LMTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
              LD E ++ Y  T  A D            S  V I V++VND  P+F  PQ+   +  
Sbjct: 2460 SSLDREKKNHYILTALAKDNPGDIASNRRENSVQVVIQVLDVNDCRPQFSKPQFSTSV-- 2517

Query: 154  IPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIN-DSGHISIVDLSALNTS 210
                +   G+ +  + A D D+G    +  SL GP  + F ++ DSG ++   L   +  
Sbjct: 2518 --YENEPAGTSVITMLATDQDEGPNGELAYSLEGPGVEAFHVDTDSGLVTTKRLLQ-SYE 2574

Query: 211  TIQLVVVATDTGNPP 225
               L VVATD G PP
Sbjct: 2575 RFNLTVVATDGGQPP 2589



 Score = 54.7 bits (130), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 72/238 (30%), Positives = 107/238 (44%), Gaps = 50/238 (21%)

Query: 45  FSKNEYSVSALENLPVNY-VLLTVTTNKPRDLRVKYWLSNDYGE-----------RFSI- 91
           FSK  Y VS +EN+     VL    T+  R        S +YG+           +F I 
Sbjct: 671 FSKPAYFVSVVENIMAGATVLFLNATDLDR--------SREYGQESIIYSLEGSSQFRIN 722

Query: 92  SRQGDISLMQCLDYETEDSYRFTVYATD-----TLMTTSATVNISVVNVNDWDPRFRYPQ 146
           +R G+I+    LD ET+  Y   V A D        T  ATVNI+++++ND  P ++   
Sbjct: 723 ARSGEITTTSLLDRETKSEYILIVRAVDGGVGHNQKTGIATVNITLLDINDNHPTWKDAP 782

Query: 147 YELFLPHIPLADLT-PGSVIGKVEAADGDKGDRVTL--SLRGPYEKMFSINDSGHISIVD 203
           Y     +I L ++T P S +  V A D D G+  TL  S++ P  K +S+N S       
Sbjct: 783 Y-----YINLVEMTPPDSDVTTVVAVDPDLGENGTLVYSIQPP-NKFYSLNSS------- 829

Query: 204 LSALNTSTIQLVVVATDTGNP-PRQASVPAIMHFPEAIVQQASSKLNSGTSSTVLIIL 260
                T  I+   V  D  NP PR+A +  +     A+    S  L + +S+TV + L
Sbjct: 830 -----TGKIRTTHVTLDRENPDPREAEL--MREIIIAVTDCGSPPLRATSSATVFVNL 880



 Score = 51.2 bits (121), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 64/210 (30%), Positives = 94/210 (44%), Gaps = 28/210 (13%)

Query: 45  FSKNEYSVSALENLPVNYVLLTV--TTNKPRDL-RVKYWLSNDYGERFSISRQ-GDISLM 100
           FS+  Y+ S  EN  V   +LTV  T N       V Y+ S+D  +RFS+ +  G I L+
Sbjct: 460 FSQPLYNTSLYENATVGTSVLTVLATDNDVGTFGEVNYFFSDD-PDRFSLDKDTGLILLI 518

Query: 101 QCLDYETEDSYRFTVYATDTL-MTTSATVNISVVNVNDWDPRFRYPQYELFL----PHIP 155
             LDYE    +  TV A D     T+  V I+V++VND  P F+   Y   L    P + 
Sbjct: 519 ARLDYELIQRFTLTVIARDGGGEETTGRVRINVLDVNDNVPTFQKDAYVGALRENEPSV- 577

Query: 156 LADLTPGSVIGKVEAADGDKGDR-------VTLSLRGPYEKMFSINDSGHISI---VDLS 205
                  + + ++ A D D           V+ S+ G Y  +      G IS+   +D  
Sbjct: 578 -------TQLVRLRATDEDAPPNNQITYSIVSASVFGSYFDVSVYEGYGVISVSRPLDYE 630

Query: 206 ALNTSTIQLVVVATDTGNPPRQASVPAIMH 235
            +    I L V+A D GNPP  ++VP  + 
Sbjct: 631 QIPNGLIYLTVMAKDAGNPPLNSTVPVTIE 660



 Score = 48.9 bits (115), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 57/211 (27%), Positives = 95/211 (45%), Gaps = 28/211 (13%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVT-TNKPRDL--RVKYWLSNDYGERFSISR-QGDISLM 100
            FS    +V  LEN P  + +L VT T++   L   + Y +     +RF I    G I + 
Sbjct: 2068 FSPPTLTVHLLENCPPGFSVLQVTATDRDSGLNGELIYRIEAGAQDRFLIHPVTGVIRVA 2127

Query: 101  QC-LDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
               +D E +DSYR TV ATD     ++ +AT+ I + ++ND  P F  P   + +    L
Sbjct: 2128 NATIDREEQDSYRLTVVATDRGTVPLSGTATITILINDINDCRPEFLNPIQTVSV----L 2183

Query: 157  ADLTPGSVIGKVEAADGDKGDRVTLSLRG------------PYEKMFSIN-DSGHISI-- 201
                PG+VI  + A D D   ++   + G              E  F++N ++G + +  
Sbjct: 2184 ESAEPGTVIANITAIDRDLNPKLEYHIIGIVAKDDTDRLVPDQEDAFAVNINTGSVMVKS 2243

Query: 202  -VDLSALNTSTIQLVVVATDTGNPPRQASVP 231
             ++   + T  + L V+   +  P R  S+P
Sbjct: 2244 PLNRELVATYEVTLSVIDNASDLPERSVSLP 2274



 Score = 46.6 bits (109), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 62/203 (30%), Positives = 90/203 (44%), Gaps = 23/203 (11%)

Query: 43   LQFSKNEYSVSALENLPVNYVLLTVTTNKPRDL-----RVKYWLSNDYGERFSI-SRQGD 96
            +QFS   Y  + LENL +   ++ V      +L     R   + S      F I S  G 
Sbjct: 1311 VQFSNASYEAAILENLALGTEIVRVQAYSIDNLNQITYRFDAYTSAQAKALFKIDSVTGV 1370

Query: 97   ISLMQCLDYETEDSYRFTVYATDTLMTTSATVN--ISVVNVNDWDPRFRYPQYELFLPHI 154
            I++   +D E  D Y  TV A D      +TV   I+V++ ND  PRF +         +
Sbjct: 1371 ITVKGPVDREKGDFYTLTVVADDGGPKVDSTVKVYITVLDENDNSPRFDFTSDSAV--SV 1428

Query: 155  PLADLTPGSVIGKVEAADGDKGD--RVTLSL-RGPYEKMFSI---NDS-GHISI---VDL 204
            P  D   G  +  V+A D D G   +V  SL  G     F I   NDS G + +   +D 
Sbjct: 1429 P-EDCPVGQQVATVKARDPDAGSNGQVVFSLASGNIAGAFDIVTTNDSIGEVFVARPLDR 1487

Query: 205  SALNTSTIQLVVVATDTGNPPRQ 227
              L+   ++  VVA+D G+PPR+
Sbjct: 1488 EELDHYILK--VVASDRGSPPRK 1508



 Score = 43.9 bits (102), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 63/241 (26%), Positives = 110/241 (45%), Gaps = 30/241 (12%)

Query: 45   FSKNEYSVSALENLPVNY--VLLTVTTNKPR-DLRVKYWLSN-DYGERFSIS-RQGDISL 99
            F    Y+VS  E++P  +  V L  T +    +  + Y+++  +   +FS+  R   +  
Sbjct: 995  FFPATYNVSVSEDVPREFRVVWLNCTDDDAGLNAELSYFITGGNVDGKFSVGYRDAVVRT 1054

Query: 100  MQCLDYETEDSYRFTVYATDT-----LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHI 154
            +  LD ET  +Y   + A D        T +ATV I+V++VND  P F    YE  +P  
Sbjct: 1055 VVSLDRETTATYTLVLEAIDNGPVGKRRTGTATVFITVLDVNDNRPIFLQSSYEASVPE- 1113

Query: 155  PLADLTPGSVIGKVEAADGDKGD--RVTLS-LRGPYEKMFSINDSGHISIVDLSALN--- 208
               D+  G  I +++A D D+G+  RV    L G +   F I+ S  + +     L+   
Sbjct: 1114 ---DIPEGHSIMQLKATDADEGEFGRVWYRILHGNHGNNFRIHVSNGLLMRGPRPLDRER 1170

Query: 209  TSTIQLVVVATDTGNPPRQASVPAIMHFPE------AIVQQASSKLN----SGTSSTVLI 258
             S+  L V A +    P ++SV  I++  +         QQ  S+L     +G  ++V++
Sbjct: 1171 NSSHVLTVEAYNHDLGPMRSSVRVIVYVEDVNDEAPVFTQQQYSRLGLRETAGVGTSVIV 1230

Query: 259  I 259
            +
Sbjct: 1231 V 1231



 Score = 41.6 bits (96), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 42/148 (28%), Positives = 68/148 (45%), Gaps = 19/148 (12%)

Query: 44  QFSKNEYSVSALENLPVNYVL--LTVTTNKPRDLRV----KYWLSNDYGERF-----SIS 92
           +F+ +EYSV+  E   V + L       +K  +L +    + +L  +  + F     S+ 
Sbjct: 347 EFNSSEYSVAITELAQVGFALPLFIQVVDKDENLGLNSMFEVYLVGNNSQHFIISPTSVQ 406

Query: 93  RQGDISLMQC--LDYETEDSYRFTVYATDTL--MTTSATVNISVVNVNDWDPRFRYPQYE 148
            + DI +     LDYET D Y F ++A +++      A V I+++N ND  P F  P Y 
Sbjct: 407 GKADIRIRVAVPLDYETVDRYDFDLFANESVPDHVGYAKVKIALINENDNRPIFSQPLYN 466

Query: 149 LFLPHIPLADLTPGSVIGKVEAADGDKG 176
             L      + T G+ +  V A D D G
Sbjct: 467 TSL----YENATVGTSVLTVLATDNDVG 490



 Score = 40.0 bits (92), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 66/286 (23%), Positives = 120/286 (41%), Gaps = 61/286 (21%)

Query: 4    EDDFL-QPITLVVRA----IQYDNQDRYALATLIVSK-----AGTS-----LRELQFSKN 48
            +D FL  P+T V+R     I  + QD Y L  +   +     +GT+     + ++   + 
Sbjct: 2112 QDRFLIHPVTGVIRVANATIDREEQDSYRLTVVATDRGTVPLSGTATITILINDINDCRP 2171

Query: 49   EY-----SVSALENLPVNYVLLTVTTNKPRDL--RVKYW------------LSNDYGERF 89
            E+     +VS LE+     V+  +T    RDL  +++Y             L  D  + F
Sbjct: 2172 EFLNPIQTVSVLESAEPGTVIANITAID-RDLNPKLEYHIIGIVAKDDTDRLVPDQEDAF 2230

Query: 90   SIS-RQGDISLMQCLDYETEDSYRFTVYATD--------TLMTTSATVNISVVNVNDWDP 140
            +++   G + +   L+ E   +Y  T+   D        ++   +A + +++++VND  P
Sbjct: 2231 AVNINTGSVMVKSPLNRELVATYEVTLSVIDNASDLPERSVSLPNAKLTVNILDVNDNTP 2290

Query: 141  RFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSGHIS 200
            +F+      +   I L   TPG+ +  V A D DKG    ++       +  +   G++ 
Sbjct: 2291 QFKPFGITYYTERI-LEGATPGTTLIAVAAVDPDKGLNGLITY-----TVLDLMPPGYVQ 2344

Query: 201  IVDLSALNTSTIQLV-----------VVATDTGNPPRQASVPAIMH 235
            + D SA      Q V           V A+D G+PPR A +P  + 
Sbjct: 2345 LEDPSAGKVIANQTVDYEEVHWLNFTVRASDNGSPPRAAEIPVYLE 2390



 Score = 39.7 bits (91), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 33/104 (31%), Positives = 47/104 (45%), Gaps = 8/104 (7%)

Query: 95   GDISLMQCLDYETEDSYRFTVYATDTLMTTSAT---VNISVVNVNDWDPRFRYPQYELFL 151
            G +   Q +DYE      FTV A+D      A    V + +V++ND +P F  P Y+  +
Sbjct: 2351 GKVIANQTVDYEEVHWLNFTVRASDNGSPPRAAEIPVYLEIVDINDNNPIFDQPSYQEAV 2410

Query: 152  PHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSIN 194
                  D   G+VI  V A D D G+   +    G  E  F+IN
Sbjct: 2411 ----FEDAPVGTVILTVTATDADSGNFALIEYSLGDGEGKFAIN 2450



 Score = 39.3 bits (90), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 59/207 (28%), Positives = 90/207 (43%), Gaps = 22/207 (10%)

Query: 27  ALATLIVSKAGTSLRELQFSKNEYSVSAL---ENLPVNYVLLTVTTNKPRDLR---VKYW 80
           A   +++S     +  L F  N +  + L   E+ PV     +VT    RD+    + + 
Sbjct: 12  ACLFVLISGCWGQVNRLPFFTNHFFDTYLLISEDTPVGS---SVTQLLARDMDNDPLVFG 68

Query: 81  LSNDYGERFSISR--QGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDW 138
           +S +   RF       G + L Q LD ET+  +      +D     +  VNI V +VND 
Sbjct: 69  VSGEEASRFFAVEPDTGVVWLRQPLDRETKSEFTVEFSVSDHQGVITRKVNIQVGDVNDN 128

Query: 139 DPRFRYPQYELFLPHIPLADLTP-GSVIGKVEAADGD--KGDRVTLSLRGPYEKMFSIND 195
            P F    Y + +P     + TP G+ I  V A D D   G  V  S + P    F+I+ 
Sbjct: 129 APTFHNQPYSVRIP-----ENTPVGTPIFIVNATDPDLGAGGSVLYSFQPP-SPFFTIDS 182

Query: 196 S-GHISIV-DLSALNTSTIQLVVVATD 220
           + G +++V +L    T   QL V ATD
Sbjct: 183 ARGIVTVVRELDYETTQAYQLTVNATD 209


>gi|198475669|ref|XP_001357109.2| GA17399 [Drosophila pseudoobscura pseudoobscura]
 gi|198137906|gb|EAL34175.2| GA17399 [Drosophila pseudoobscura pseudoobscura]
          Length = 4959

 Score = 62.0 bits (149), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 54/193 (27%), Positives = 87/193 (45%), Gaps = 23/193 (11%)

Query: 50   YSVSALENLPVNYVLLTVTTNK---PRDLRVKYWLSNDYGERFSISR-QGDISLMQCLDY 105
            +S++  EN  +   ++ VT++     ++    Y  S + GE+F I    G+I++   LD 
Sbjct: 2695 FSLNVTENAEIGSFVIRVTSSDLDLGQNANATYSFSANPGEKFKIEPLSGNITVAGHLDR 2754

Query: 106  ETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVI 165
            E ED Y   V A+D        + I++ + ND  P F +  Y    P +    L P +++
Sbjct: 2755 EQEDEYILKVVASDGAWRAETPITITIQDQNDNAPEFEHSFYSFSFPEL----LHPVALV 2810

Query: 166  GKVEAADGDK---GDRVTLSLRGPYEKMFSINDSGHISIVDLSALNTSTIQ--------- 213
            G++ A D DK      ++ SL+ P   MFSI D     I    A+     Q         
Sbjct: 2811 GQIIATDRDKLGPNSVISYSLQQP-SPMFSI-DPATGEIFSKKAIQYKRSQYVRSPENMY 2868

Query: 214  -LVVVATDTGNPP 225
             L ++ATD G PP
Sbjct: 2869 ALTILATDNGKPP 2881



 Score = 55.8 bits (133), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 55/202 (27%), Positives = 94/202 (46%), Gaps = 20/202 (9%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVT-TNKPRDL--RVKYWLSNDYGERFSI-SRQGDISLM 100
            F    Y  S  ENLP+  ++L  T T+K   L  ++++ L  ++  RF I +  G I+  
Sbjct: 2269 FELQSYHASIQENLPIGTLVLQPTATDKDAGLNAKLRFNLLGEHMARFHIDTDTGVITTA 2328

Query: 101  QCLDYETEDSYRFTVYATDTLMT----TSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
              LD E    Y  T+ A D+ +T    +S  + I+V +VND +P+F    Y + +P    
Sbjct: 2329 TVLDREETAVYHLTLMAQDSSITEPRASSVNLTITVGDVNDNEPKFESGSYSIAVPD--- 2385

Query: 157  ADLTPGSVIGKVEAADGDKGDRVTL--SLRGPYEKMFSIN-DSGHISI-----VDLSALN 208
              +  G  +    A D D+GD   +  S+ G  ++ F +N  +G IS      +   +  
Sbjct: 2386 -RIAAGEFVFGARAVDLDEGDNAVIHYSISGRDQEFFEVNFKTGAISTSLELKIRKKSPG 2444

Query: 209  TSTIQLVVVATDTGNPPRQASV 230
             +   +V+ ATD G   + +S 
Sbjct: 2445 DTIYSIVMQATDQGQTQQTSSA 2466



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 56/228 (24%), Positives = 104/228 (45%), Gaps = 22/228 (9%)

Query: 25  RYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVT-------TNKPRDLRV 77
           ++A   L V+    +    QF + + +VS  E++    ++ T+T       TN      +
Sbjct: 595 KFAYTQLKVTVLDENDEAPQFGQQQLNVSLSEDVAPQSLVCTLTATDHDQGTNGSVAFSL 654

Query: 78  KYWLSNDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATD----TLMTTSATVNISV 132
              +   Y ++F+I S  G ++  + LD ET  +Y   V A D    T  + +ATV +SV
Sbjct: 655 APSVERLYQQQFAIDSITGQLTTRKALDRETMANYEIFVIARDQGAPTPQSATATVYLSV 714

Query: 133 VNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFS 192
           +++ND DP F YPQ+ ++         +    + +V   D     RV+ +L    ++ F 
Sbjct: 715 LDINDNDPEF-YPQHYIYT-------FSDEIYLSRVRDRDAGINSRVSYNLTHNPDQQFR 766

Query: 193 INDSGHISIVD--LSALNTSTIQLVVVATDTGNPPRQASVPAIMHFPE 238
           I     +  +   + A   ST+ + ++ATD G PP    +  ++H  +
Sbjct: 767 IGPVTGVLYLQRPVRAEPGSTLHVELMATDAGTPPLSNRLSLLVHIAD 814



 Score = 52.0 bits (123), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 48/162 (29%), Positives = 82/162 (50%), Gaps = 17/162 (10%)

Query: 45   FSKNEYSVSALENLPVN-YVLLTVTTNK--PRDLRVKY-WLSNDYGERFSI--SRQGDIS 98
            F+++EY     EN PV  +V     T+K  P++  V Y +L +     F +  S  G IS
Sbjct: 3114 FNQSEYHGYVAENKPVGTFVFQAHATDKDSPKNAIVHYSFLPSGTDRHFFLMNSSNGTIS 3173

Query: 99   LMQCLDYETEDSYRFTVYAT--DTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
                 DYE   ++   + A   D+ M + AT+ + ++ VN++ P+F  P +     H  +
Sbjct: 3174 SAATFDYEERRTFALQLKAKNPDSSMESYATLYVHILGVNEFYPQFLQPVF-----HFDV 3228

Query: 157  ADLTP-GSVIGKVEAADGDKGD--RVTLSLRGPY-EKMFSIN 194
            ++ +  G+++G V+A D D G+  RV   L G   +K F+IN
Sbjct: 3229 SETSAVGTIVGAVQATDKDSGEDGRVYYLLVGSSNDKGFAIN 3270



 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 56/219 (25%), Positives = 96/219 (43%), Gaps = 15/219 (6%)

Query: 15   VRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRD 74
            V AI    Q R A   + V+    +    QF +  ++ +  E+L + + + T+  + P  
Sbjct: 1566 VYAIALGGQPRTAHTKVKVTVLDKNDSPPQFLETPFAYNVSEDLEIGHTIATIRAHDPDT 1625

Query: 75   L-RVKYWLSNDYGERFSIS-RQGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISV 132
            L  VK+ L +    +F +    G + L   LD ET+  Y   +  +D +  T   + I V
Sbjct: 1626 LGTVKFLLIDGQDGKFQLEPTTGRLVLNDTLDRETKSKYDVRIRVSDGVQYTETYIAIEV 1685

Query: 133  VNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEK 189
             + ND  P F    Y   +P     +   G  +G+V A D D G    LS   +      
Sbjct: 1686 SDTNDNPPMFEESVYSFDIPE----NAPRGYQVGQVVARDADLGQNSQLSYGVVSDWAND 1741

Query: 190  MFSIN-DSGHISIVDLSALNTSTIQ---LVVVATDTGNP 224
            +FS+N  +G +++   + L+   +Q   L+V A D+G P
Sbjct: 1742 VFSLNPQTGMLTLT--ARLDYEEVQHYILIVQAQDSGQP 1778



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 58/197 (29%), Positives = 93/197 (47%), Gaps = 20/197 (10%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKY-WLSNDYGERFSISRQ-GDISL 99
            F   +YS S  EN  +  ++L V+    ++  + R++Y  ++ D  + FSIS   G + +
Sbjct: 2056 FDPKQYSASVAENASIGAMVLQVSATDVDEGANGRIRYSIMTGDQNQDFSISEDTGVVRV 2115

Query: 100  MQCLDYETEDSYRFTVYATDTLMTTSAT----VNISVVNVNDWDPRFRYPQY--ELFLPH 153
             + L+YE    Y  TV A D  +  SA+    + I ++++ND  P F    Y   +    
Sbjct: 2116 AKNLNYERNARYTLTVRAEDCAVENSASDTAELIIGILDINDNRPTFLDSPYLARVMENT 2175

Query: 154  IPLADLTPGSVIGKVEAADGDK---GDRVTLSLRGPYEKMFSINDS-GHISIV-DLSALN 208
            +P  D   G V+  V A D D      +V   L+     +F IN S G I+++  L    
Sbjct: 2176 VPPND---GYVL-TVNAYDADTPPLNSQVRYFLKEGDSDLFRINASTGAIALLKQLDRET 2231

Query: 209  TSTIQLVVVATDTGNPP 225
             S   L +VA DTG+PP
Sbjct: 2232 QSEYILTLVAMDTGSPP 2248



 Score = 47.4 bits (111), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 61/238 (25%), Positives = 104/238 (43%), Gaps = 22/238 (9%)

Query: 13  LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKP 72
           L V A+      R   A LI+     +  E  F K+EYS    E  P    + ++T    
Sbjct: 478 LTVVAMDRGTPARITTAHLIIDVNDVNDHEPVFEKSEYSAVLSELAPTGSYVASITATDE 537

Query: 73  R---DLRVKYW-LSNDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATD---TLMTT 124
               + +V Y  LS +  + FSI +  G I+    LD E +DS   ++ A D        
Sbjct: 538 DTGVNAQVHYEILSGNELKWFSIDAATGLIATAGALDREIKDSVELSISARDGGPNPKFA 597

Query: 125 SATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTL--- 181
              + ++V++ ND  P+F   Q  + L      D+ P S++  + A D D+G   ++   
Sbjct: 598 YTQLKVTVLDENDEAPQFGQQQLNVSLSE----DVAPQSLVCTLTATDHDQGTNGSVAFS 653

Query: 182 ---SLRGPYEKMFSINDSGHISIVDLSALNTSTI---QLVVVATDTGNPPRQASVPAI 233
              S+   Y++ F+I DS    +    AL+  T+   ++ V+A D G P  Q++   +
Sbjct: 654 LAPSVERLYQQQFAI-DSITGQLTTRKALDRETMANYEIFVIARDQGAPTPQSATATV 710



 Score = 46.2 bits (108), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 40/137 (29%), Positives = 60/137 (43%), Gaps = 4/137 (2%)

Query: 103  LDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPG 162
            LDYE   +Y   V A+D    +  +V +  +NV D +         ++   + L + +P 
Sbjct: 2546 LDYELTHAYEIWVEASDGDRPSLRSVMLVTINVTDANDNAPIMDKLIYNAEV-LEEESPP 2604

Query: 163  SVIGKVEAADGDKGD--RVTLSLRGPYEKMFSINDSGHI-SIVDLSALNTSTIQLVVVAT 219
             +I  V+A D D GD   V+  L   YE  F I DSG I + + L     S    VV A 
Sbjct: 2605 QLIAVVKARDRDSGDNGEVSYRLSNDYEGTFEITDSGEIYTTMRLDREELSDYAFVVEAV 2664

Query: 220  DTGNPPRQASVPAIMHF 236
            D G P    +   ++H 
Sbjct: 2665 DQGVPQLTGTASVLLHL 2681



 Score = 42.7 bits (99), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 30/86 (34%), Positives = 42/86 (48%), Gaps = 7/86 (8%)

Query: 64   LLTVTTNKPRDL----RVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATD 119
            L+ V   + RD      V Y LSNDY   F I+  G+I     LD E    Y F V A D
Sbjct: 2606 LIAVVKARDRDSGDNGEVSYRLSNDYEGTFEITDSGEIYTTMRLDREELSDYAFVVEAVD 2665

Query: 120  T---LMTTSATVNISVVNVNDWDPRF 142
                 +T +A+V + +++ ND  P+F
Sbjct: 2666 QGVPQLTGTASVLLHLLDKNDNPPKF 2691



 Score = 38.9 bits (89), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 40/168 (23%), Positives = 74/168 (44%), Gaps = 12/168 (7%)

Query: 76  RVKYWLSNDYGERFSISR-QGDISLMQCLDYETEDSYRFTVYATDTL---MTTSATVNIS 131
           RV Y L+++  ++F I    G + L + +  E   +    + ATD     ++   ++ + 
Sbjct: 752 RVSYNLTHNPDQQFRIGPVTGVLYLQRPVRAEPGSTLHVELMATDAGTPPLSNRLSLLVH 811

Query: 132 VVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYE 188
           + +VND  P F +  YE  L    L      +    + A D D G+   +S   + G  +
Sbjct: 812 IADVNDHTPVFDHTSYETSL----LETTKVNTRFFALAATDIDLGENGRISYEIIEGNAD 867

Query: 189 KMFSINDSGHISI-VDLSALNTSTIQLVVVATDTGNPPRQASVPAIMH 235
           +MF +   G++ +   L         L V   D+G+P R + VP ++H
Sbjct: 868 RMFGVFPDGYLFVRAPLDREERDYYALTVSCQDSGDPSRSSVVPVVIH 915


>gi|340382647|ref|XP_003389830.1| PREDICTED: protocadherin Fat 4-like [Amphimedon queenslandica]
          Length = 2964

 Score = 62.0 bits (149), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 61/201 (30%), Positives = 92/201 (45%), Gaps = 17/201 (8%)

Query: 43  LQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKY-WLSNDYGERFSISRQ-GDISLM 100
           +Q S + YS+S+  NL +  ++L      PR  R  Y  +S + G  FSIS   G I++ 
Sbjct: 88  VQASLSGYSLSS--NLTI--IVLPSFDATPRFERTSYVTISGNMGGVFSISSTTGIITVT 143

Query: 101 QCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLT 160
             LD ET   Y  TV   D + +    V + V +VND  P F    Y   +       + 
Sbjct: 144 NPLDRETHPQYLLTVRYIDDVGSIDTQVQVLVTDVNDNGPVFNNSYYYYTIEE----GVA 199

Query: 161 PGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDSGHISIVDLSALNTSTI---QLV 215
            G  +G V A D D G    V+ SL GP    FS++  G +S    + LN   +    L 
Sbjct: 200 FGRPVGSVSATDPDNGLNGTVSYSLSGPNSNKFSVSSDGQVSTA--AVLNYEELVQFSLT 257

Query: 216 VVATDTGNPPRQASVPAIMHF 236
           V A+D G+PP+ ++   ++  
Sbjct: 258 VTASDNGDPPQSSTAALVIQL 278



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 60/190 (31%), Positives = 91/190 (47%), Gaps = 19/190 (10%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGERFSISRQGDISLMQCLD 104
            FS++ Y+ S +E+ P+  V+LTV         ++Y L      RFSI   G I +   +D
Sbjct: 931  FSQSLYTASVVESSPIGTVVLTVNATDLDSNMIQYELKGLAEGRFSIDNNGVIRISGGID 990

Query: 105  YET---EDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLA-DLT 160
             E     +   F V+A    ++T A ++I + ++ND+     YPQ+ LF P    A + T
Sbjct: 991  REEFLPSEEIVFLVFAYGGSLST-ADISIHIDDINDY-----YPQF-LFAPFYGTAPENT 1043

Query: 161  P----GSVIGKVEAADGDKGDRVTL--SLRGPYEKMFSINDSGHISIVDLSALNTST--I 212
            P    G  I  V A D DK +  TL  SL    +  FSI+    + I + +    +T   
Sbjct: 1044 PPGPQGLYITTVRAVDLDKEENGTLTYSLVTREQDGFSIDPVTGVIIANRTFDRETTRFF 1103

Query: 213  QLVVVATDTG 222
            QLV +ATD G
Sbjct: 1104 QLVTMATDNG 1113



 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 83/165 (50%), Gaps = 14/165 (8%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKP----RDLRVKYWLSNDYGERFSI---SRQGDI 97
           F+++ Y++   E   V ++ L +T N P    +   V   LS +    F +   + +G++
Sbjct: 827 FTQSVYNILLNETQLVPHLALELTANDPDRNDQGRLVYAILSGNTEATFQLRNNAGKGEL 886

Query: 98  SLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLA 157
            L + LDYE    Y  +V  +D + T +ATV++ V+NV+D  P F    Y        + 
Sbjct: 887 YLRRSLDYERYTQYSLSVQVSDGIYTDTATVSVLVINVDDEPPIFSQSLYTA-----SVV 941

Query: 158 DLTP-GSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSGHISI 201
           + +P G+V+  V A D D  + +   L+G  E  FSI+++G I I
Sbjct: 942 ESSPIGTVVLTVNATDLDS-NMIQYELKGLAEGRFSIDNNGVIRI 985



 Score = 45.8 bits (107), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 51/157 (32%), Positives = 74/157 (47%), Gaps = 21/157 (13%)

Query: 77  VKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDTL---MTTSATVNISVV 133
           V Y LS     +FS+S  G +S    L+YE    +  TV A+D      +++A + I + 
Sbjct: 220 VSYSLSGPNSNKFSVSSDGQVSTAAVLNYEELVQFSLTVTASDNGDPPQSSTAALVIQLN 279

Query: 134 NVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGK----VEAADGDKGDRVTLSL-RGPYE 188
           N +D  P F    Y   +P+    D T   VIG     +EA D D    V+ SL  G  E
Sbjct: 280 NTDDECPSFSGSVYVKDVPY----DFTSPPVIGDHILTIEAYDPDNIGGVSYSLISGNDE 335

Query: 189 KMFSIND-SGHISIVDLSALNTSTIQ----LVVVATD 220
            +F ++  SG+ISI    A N   I+    L+V A+D
Sbjct: 336 GVFQLDSVSGNISI----ARNEEAIRGQYVLIVAASD 368


>gi|71725377|ref|NP_001025159.1| protocadherin Fat 2 precursor [Mus musculus]
 gi|81888837|sp|Q5F226.1|FAT2_MOUSE RecName: Full=Protocadherin Fat 2; AltName: Full=FAT tumor suppressor
            homolog 2; Flags: Precursor
 gi|148701548|gb|EDL33495.1| mCG1445 [Mus musculus]
          Length = 4351

 Score = 62.0 bits (149), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 74/255 (29%), Positives = 111/255 (43%), Gaps = 36/255 (14%)

Query: 6    DFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQ--------------FSKNEYS 51
            DF   +  V   + Y++++++         A  S  E                FS+  YS
Sbjct: 2219 DFKTGVLTVTGPLDYESKNKHVFTVRATDTALGSFSEATVEVLVEDINDNPPTFSQLVYS 2278

Query: 52   VSALENLPVN---YVLLTVTTNKPRDLRVKYWL---SNDYGERFSIS-RQGDISLMQCLD 104
             S  E  P       LL    +  ++  V Y +    +D  + F I+   G++  +Q LD
Sbjct: 2279 TSVSEGSPAQTPVIQLLASDQDSGQNQDVSYQIVEDGSDVSKFFRINGSTGEMFTIQELD 2338

Query: 105  YETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTP 161
            YE    +R  V ATD     +T    V ++V ++ND  P FR PQYE  +  +     T 
Sbjct: 2339 YEAHQHFRVKVRATDRGDPPLTGETLVVVNVSDINDNPPEFREPQYEANVSEL----ATC 2394

Query: 162  GSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIND-SGHISIVDLSALN-TSTIQLVV 216
            G ++ KV+A D D GD   L    L G  ++ FSIN  SG IS+ +L      S+  L V
Sbjct: 2395 GHLVLKVQALDPDIGDTSRLEYLILSGNQDRHFSINSTSGIISMFNLCKKQLDSSYNLRV 2454

Query: 217  VATDTGNPPRQASVP 231
             A+D      QA+VP
Sbjct: 2455 GASDG---VFQATVP 2466



 Score = 58.9 bits (141), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 50/182 (27%), Positives = 84/182 (46%), Gaps = 22/182 (12%)

Query: 43   LQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGER---FSISRQ-GDIS 98
            L F ++ YS + +E  PVN++L  ++      L   +W     G++   F I +  G I 
Sbjct: 1347 LSFDESHYSFAVMETDPVNHMLGVISVEGRPGL---FWFHISDGDKDMDFDIEKTTGSIV 1403

Query: 99   LMQCLDYETEDSYRFTVYATDTLMTTSATVNI-SVVNVNDWDPRFRYPQYELFLPHIPLA 157
            + + LD   + SY  TV  TD   T +  V+I  + N+N   P+F    Y++ +P     
Sbjct: 1404 IARPLDTRRKSSYNLTVEVTDGFHTIATQVHILMIANINHHRPQFLQDHYDIRVPQ---- 1459

Query: 158  DLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSGHISIVDLSALNTSTIQLVVV 217
            D  PG  + +V+A D D G  +          +++I+ S      +L  L+ S+  LV V
Sbjct: 1460 DTLPGVELLRVQATDQDHGKGL----------IYTIHSSRDPGSANLFQLDPSSGVLVTV 1509

Query: 218  AT 219
             T
Sbjct: 1510 GT 1511



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 57/204 (27%), Positives = 91/204 (44%), Gaps = 21/204 (10%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKP---RDLRVKYWLSNDYG----ERFSI-SRQGD 96
            F  + Y     EN+P    ++ VT N      D +V Y LS + G    + F++ S  G 
Sbjct: 2799 FEADPYKAFLTENMPGGTTVIQVTANDQDTGSDGQVSYRLSVEPGSNIHQLFAVDSESGW 2858

Query: 97   ISLMQCLDYETEDSYRFTVYATD----TLMTTSATVNISVVNVNDWDPRFRYPQYELFLP 152
            I+ +Q LD ET+ +YRF V A D      +++ A V +S+ + ND  PRF    Y   + 
Sbjct: 2859 ITTLQELDCETQQTYRFYVVAFDHGQTIQLSSQALVEVSITDENDNPPRFASEDYRGSV- 2917

Query: 153  HIPLADLTPGSVIGKVEAADGD---KGDRVTLSL-RGPYEKMFSINDSG-HISIVDLSAL 207
               + +  PG ++  ++  D D   +  +VT  +  G     FSI+  G    I     L
Sbjct: 2918 ---VENNEPGELVATLKTLDADISEQNRQVTCYITEGDPLGQFSISQVGDEWRITSRKTL 2974

Query: 208  NTSTIQLVVVATDTGNPPRQASVP 231
            +   I   ++     +   QASVP
Sbjct: 2975 DREHIAKYLLRITASDGKFQASVP 2998



 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 57/200 (28%), Positives = 88/200 (44%), Gaps = 18/200 (9%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTT------NKPRDLRVKYWLSNDYGERFSISRQGD- 96
            +F+  +Y  S +EN     ++ T+ T       + R +   Y    D   +FSIS+ GD 
Sbjct: 2907 RFASEDYRGSVVENNEPGELVATLKTLDADISEQNRQVTC-YITEGDPLGQFSISQVGDE 2965

Query: 97   --ISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHI 154
              I+  + LD E    Y   + A+D     S  V + V+++ND  P+      +L     
Sbjct: 2966 WRITSRKTLDREHIAKYLLRITASDGKFQASVPVEVFVLDINDNSPQCS----QLLYTGK 3021

Query: 155  PLADLTPGSVIGKVEA--ADGDKGDRVTLSLRGPYEKMFSIN-DSGHISIVD-LSALNTS 210
               D+TPG  I KV A   D D   ++T SL GP  + F ++  +G ++ +  L      
Sbjct: 3022 VREDVTPGHFILKVSAIDVDMDTNAQITYSLHGPGAQEFKLDPHTGELTTLSVLDRERKD 3081

Query: 211  TIQLVVVATDTGNPPRQASV 230
               LV  ATD G    QA V
Sbjct: 3082 VYNLVAKATDGGGQSCQAEV 3101



 Score = 47.4 bits (111), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 52/193 (26%), Positives = 88/193 (45%), Gaps = 17/193 (8%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGERFSIS--RQGDISLMQC 102
            F    Y V   EN+ +   +L      P  LR+ Y +  +       +  + G +++   
Sbjct: 2171 FQSPYYKVKVPENITLYTPILHTQARSPEGLRLIYNIVEEEPLMLFTTDFKTGVLTVTGP 2230

Query: 103  LDYETEDSYRFTVYATDTLMT--TSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLT 160
            LDYE+++ + FTV ATDT +   + ATV + V ++ND  P F    Y        +++ +
Sbjct: 2231 LDYESKNKHVFTVRATDTALGSFSEATVEVLVEDINDNPPTFSQLVYS-----TSVSEGS 2285

Query: 161  PGSV-IGKVEAADGDKGDRVTLSLR-----GPYEKMFSINDS-GHI-SIVDLSALNTSTI 212
            P    + ++ A+D D G    +S +         K F IN S G + +I +L        
Sbjct: 2286 PAQTPVIQLLASDQDSGQNQDVSYQIVEDGSDVSKFFRINGSTGEMFTIQELDYEAHQHF 2345

Query: 213  QLVVVATDTGNPP 225
            ++ V ATD G+PP
Sbjct: 2346 RVKVRATDRGDPP 2358



 Score = 47.0 bits (110), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 37/124 (29%), Positives = 64/124 (51%), Gaps = 10/124 (8%)

Query: 28   LATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWL--S 82
            + T++++    +    +F+ + Y+V  LEN  V  V+LTV+    + P +  + Y L   
Sbjct: 3306 VTTIVINVTDVNEHHPRFTHDLYTVRVLENAIVGDVILTVSASDDDGPVNSVITYSLVGG 3365

Query: 83   NDYGERFSIS-RQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDW 138
            N  G  F+I  ++G + + + LD+E   SY   + ATD+    +     V + VV+VND 
Sbjct: 3366 NQLG-HFTIDPKKGKLQVAKALDWEQTPSYSLRIRATDSGQPPLHEDTEVAVEVVDVNDN 3424

Query: 139  DPRF 142
             PRF
Sbjct: 3425 PPRF 3428



 Score = 46.2 bits (108), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 64/204 (31%), Positives = 86/204 (42%), Gaps = 24/204 (11%)

Query: 41   RELQFSKNEYSVSALENLPVNYVL--LTVTTNKPRDLRVKYWLSNDYGERFSISRQGDIS 98
            + LQF ++ Y     EN P + VL  L V  N   D  + Y+L N       +   G + 
Sbjct: 1964 KSLQFDQDIYRARVTENTPHSNVLVILGVHGNHLNDT-LSYFLLNGTDLFHMVKSAGVLQ 2022

Query: 99   LMQC-LDYETEDSYRFTVYATDTLM---TTSATVNISVVNVNDWDPRFRY-PQYELFLPH 153
                  D E +D++   V   D  +      A V +SV +VND  P F++ P Y +    
Sbjct: 2023 TRGVTFDREQQDTHEVAVEVRDNRVPRRVAQALVRVSVEDVNDNIPEFQHLPYYTV---- 2078

Query: 154  IPLADLT-PGSVIGKVEAADGDKGDR--VTLSLRGPYEKMFSINDS-GHISI---VDLSA 206
              + D T PG V+ +V A D D G    VT      Y   F I+   G IS+    D  A
Sbjct: 2079 --IQDGTEPGDVLFQVSATDKDLGANGTVTYGFAEDY-AYFRIDPYVGDISLKKPFDYQA 2135

Query: 207  LNTSTIQLVVVATDTGNPPRQASV 230
            LN     L V A D G PP Q  V
Sbjct: 2136 LN--KYHLRVTARDAGTPPLQTEV 2157



 Score = 45.8 bits (107), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 49/193 (25%), Positives = 88/193 (45%), Gaps = 19/193 (9%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGERFSIS-RQGDISL 99
            Q S+  Y+    E++   + +L V+    +   + ++ Y L     + F +    G+++ 
Sbjct: 3012 QCSQLLYTGKVREDVTPGHFILKVSAIDVDMDTNAQITYSLHGPGAQEFKLDPHTGELTT 3071

Query: 100  MQCLDYETEDSYRFTVYATDTL-MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLA- 157
            +  LD E +D Y     ATD    +  A V + + +VND  PRF       F  H  +A 
Sbjct: 3072 LSVLDRERKDVYNLVAKATDGGGQSCQAEVTLHIEDVNDNAPRF-------FPSHCAVAV 3124

Query: 158  --DLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDSGHISIVD--LSALNTST 211
              + T  + +  V A D D+G   +V  SL    +  FSI+ +  +  ++  L   ++S 
Sbjct: 3125 FDNTTVKTPVAVVFARDPDQGVNAQVVYSLTDSADGQFSIDATSGVIRLEKPLQVRSSSA 3184

Query: 212  IQLVVVATDTGNP 224
            ++L V A+D G P
Sbjct: 3185 VELTVRASDLGTP 3197



 Score = 43.5 bits (101), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 38/120 (31%), Positives = 63/120 (52%), Gaps = 13/120 (10%)

Query: 95   GDISLMQCLDYETEDSYRFTVYATDT-----LMTTSATVNISVVNVNDWDPRFRYPQYEL 149
            G +++   LDYET   ++F++Y  D          SA V I V +VND  PRF    YE+
Sbjct: 1820 GTLTITSELDYETTPLFQFSIYVHDQGTPILFAPRSARVIIHVRDVNDSPPRFSEQIYEV 1879

Query: 150  FLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSIND-SGHISIVDLSAL 207
             +    +  + PG  +  V+A D D   +VT S++    ++  +I+  +G IS+V+ +AL
Sbjct: 1880 AV----VEPIHPGMELLTVQAEDNDS--KVTYSIKTSNTDEAVTIHPITGQISVVNPAAL 1933



 Score = 42.7 bits (99), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 55/193 (28%), Positives = 89/193 (46%), Gaps = 19/193 (9%)

Query: 51   SVSALENLPVNYVLLTVTTNKPRDL----RVKYWLSNDYGERFSIS-RQGDISLMQCLDY 105
            S+   E++P+  VL  +  + P DL     VKY L +D    F +    G +SL + LD+
Sbjct: 931  SLKVPEDMPLGTVLTFLDASDP-DLGPAGEVKYILVDDVHGTFRVDPMTGALSLEKELDF 989

Query: 106  ETEDSYRFTVYATDT----LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTP 161
            E    Y  + +A+D+       T   V + V++VN+       P +  F+    + + +P
Sbjct: 990  ERRAGYNLSFWASDSGRPLARRTLCHVEVLVMDVNE---NLHSPHFSSFVYQGQVQENSP 1046

Query: 162  -GSVIGKVEAADGDKG--DRVTLSLR-GPYEKMFSIN-DSGHI-SIVDLSALNTSTIQLV 215
             G+ +  V A D D G    +   LR G   + FSIN D+G + ++  L    T    L 
Sbjct: 1047 AGTQVMVVTAQDDDSGLDGELQYFLRAGTGLEAFSINQDTGMLETLAPLDREFTPYYWLT 1106

Query: 216  VVATDTGNPPRQA 228
            V+A D G+ P  A
Sbjct: 1107 VLAVDRGSVPLSA 1119



 Score = 42.4 bits (98), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 52/194 (26%), Positives = 84/194 (43%), Gaps = 23/194 (11%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTTNKPRDL----RVKYW-LSNDYGERFSI-SRQGDI 97
            +F + +Y  +  E     +++L V    P D+    R++Y  LS +    FSI S  G I
Sbjct: 2378 EFREPQYEANVSELATCGHLVLKVQALDP-DIGDTSRLEYLILSGNQDRHFSINSTSGII 2436

Query: 98   SLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLA 157
            S+      + + SY   V A+D +   +  V I+  N N + P F+   YE  L      
Sbjct: 2437 SMFNLCKKQLDSSYNLRVGASDGVFQATVPVYINTTNANKYSPEFQQNVYEAELAE---- 2492

Query: 158  DLTPGSVIGKVEAADGDKGDRVTL------SLRGPYEKMFSINDSGHISIVDLSALNTST 211
            +   G+ + ++ A D D G   T+       L G   + F IN SG I+ +       ST
Sbjct: 2493 NAKVGTKVIELLAIDKDSGPYGTVDYTIINKLAG---ERFFINPSGQITTLQKLDRENST 2549

Query: 212  ---IQLVVVATDTG 222
               I + ++A D G
Sbjct: 2550 ERVIAIKIMARDGG 2563



 Score = 42.4 bits (98), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 61/240 (25%), Positives = 102/240 (42%), Gaps = 23/240 (9%)

Query: 13   LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKP 72
            L V+A    +  R+ LA ++V    +      FSK+EY +   E++P+   +L ++    
Sbjct: 1628 LTVKAEDQGSPQRHDLAMVVVHVHPSDSSAPIFSKDEYFIEIPESVPIGSPILLISAASS 1687

Query: 73   RDLRVKYWLSNDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDTL-MTTSATVNI 130
             D+  +    N     FS+ S  G IS  + LD+E   SY+  +  ++   + T     +
Sbjct: 1688 SDVTYELREGNK-NSVFSMNSYSGLISTQKRLDHEKVSSYQLKIRGSNMAGVFTEVVALV 1746

Query: 131  SVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGK------VEAADGDKGDRVTLS-- 182
             +++ ND  P F       F+ HI  A      ++G+      + A+D D+     L   
Sbjct: 1747 YIIDENDNAPAFL---KSTFVGHISEAAPLHSLILGEDNSPLVIRASDSDQEANSLLVYK 1803

Query: 183  -LRGPYEKMFSINDS-GHISIV-DLSALNTSTIQLVVVATDTGNP----PRQASVPAIMH 235
             L     K F I+ S G ++I  +L    T   Q  +   D G P    PR A V  I+H
Sbjct: 1804 ILEPEALKFFKIDPSMGTLTITSELDYETTPLFQFSIYVHDQGTPILFAPRSARV--IIH 1861



 Score = 42.4 bits (98), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 55/209 (26%), Positives = 94/209 (44%), Gaps = 15/209 (7%)

Query: 28   LATLIVSKAGTSLRELQFSKNEYSVSALENLPVNY-VLLTVTTNKPRDLRVKYWLS--ND 84
            L T+ VS  G       F  +E+S    E+  ++  VL   T  +P   +  Y ++  N+
Sbjct: 3203 LGTVTVSIVGLEDYLPIFLNSEHSTQVPEDALIDMEVLYLATLTRPGSEKTGYHITGGNE 3262

Query: 85   YGERFSISRQGDISLMQCLDYETEDSYRFTVYATDTLMTTS---ATVNISVVNVNDWDPR 141
             G+    +  G + +   LD+ET   Y  ++  +    ++     T+ I+V +VN+  PR
Sbjct: 3263 QGKFRLDAHTGILYVNGSLDFETNPKYFLSIECSRKSSSSLSDVTTIVINVTDVNEHHPR 3322

Query: 142  FRYPQYELFLPHIPLADLTPGSVIGKVEAADGDK--GDRVTLSLRGPYE-KMFSIN-DSG 197
            F +  Y + +    L +   G VI  V A+D D      +T SL G  +   F+I+   G
Sbjct: 3323 FTHDLYTVRV----LENAIVGDVILTVSASDDDGPVNSVITYSLVGGNQLGHFTIDPKKG 3378

Query: 198  HISIVD-LSALNTSTIQLVVVATDTGNPP 225
             + +   L    T +  L + ATD+G PP
Sbjct: 3379 KLQVAKALDWEQTPSYSLRIRATDSGQPP 3407



 Score = 40.8 bits (94), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 44/154 (28%), Positives = 69/154 (44%), Gaps = 15/154 (9%)

Query: 51  SVSALENLPVNYVLLTVTTNKPR---DLRVKYWLSNDYGER-FSISRQ-GDISLMQCLDY 105
           S+  LE +PVN  L  +    P      R+ Y +++   E  F I  + G +++   LDY
Sbjct: 721 SIDILEQVPVNTPLAHLAATDPDPGFHGRLVYVIADGNEEGCFDIELETGLLTVAAALDY 780

Query: 106 ETEDSYRFTVYATDTLMTTSATVNISVVNVNDWD---PRFRYPQYELFLPHIPLADLTPG 162
           ET   Y   V   D      ++  +  V V DW+   PRF    Y+L +      D   G
Sbjct: 781 ETTSFYVLNVTVYDLGTPPKSSWKLLTVTVKDWNDKPPRFPPGGYQLTISE----DTEVG 836

Query: 163 SVIGKVEAADGDKGD--RVTLSLRGPYEKMFSIN 194
           + + +++  D D  D  RV  +L  P EK FS++
Sbjct: 837 TTVAELKTRDTDSEDNGRVRYTLLTPTEK-FSLH 869



 Score = 40.0 bits (92), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 34/113 (30%), Positives = 53/113 (46%), Gaps = 9/113 (7%)

Query: 128  VNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LR 184
            V I V + N   P F  P+YE  +P       TPG+ + +V A D D+G    +    L+
Sbjct: 1541 VTIHVEDGNLHSPHFTQPRYEANVPDT----TTPGTELLQVRAVDADRGANAEVHYSFLK 1596

Query: 185  GPYEKMFSIND-SGHISIVD-LSALNTSTIQLVVVATDTGNPPRQASVPAIMH 235
            G  E  F+I+   G I++   L  ++ +   L V A D G+P R      ++H
Sbjct: 1597 GNSEGFFNIDSLLGIITVAQRLDHVHLNRHALTVKAEDQGSPQRHDLAMVVVH 1649



 Score = 38.5 bits (88), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 45/143 (31%), Positives = 69/143 (48%), Gaps = 11/143 (7%)

Query: 95   GDISLMQCLDYETEDSYRFTVYATDT----LMTTSATVNISVVNVNDWDPRFRYPQYELF 150
            G +S  + LD E +D Y   V   D     L +TS  V + V++VND  P F +  + + 
Sbjct: 1192 GLLSTAKQLDRENKDEYVLEVTVQDNGDPPLRSTSRVV-VCVLDVNDNSPMFSHKLFNVR 1250

Query: 151  LPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIND-SGHISIVDLSAL 207
            L    L+ L+P  V  ++ A+D D+G    +T S+    E+ F I+  +G +S     A 
Sbjct: 1251 LSER-LSPLSPEPVY-RLVASDPDEGLNGSITYSIEESDEESFRIDPVTGVVSSSSTFAA 1308

Query: 208  NTSTIQLVVVATDTGNPPRQASV 230
                I L + ATD+G P    SV
Sbjct: 1309 GEYNI-LTIKATDSGQPALSTSV 1330


>gi|194748038|ref|XP_001956456.1| GF24581 [Drosophila ananassae]
 gi|190623738|gb|EDV39262.1| GF24581 [Drosophila ananassae]
          Length = 2191

 Score = 62.0 bits (149), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 70/237 (29%), Positives = 109/237 (45%), Gaps = 23/237 (9%)

Query: 11  ITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALEN-------LPVNYV 63
             L V+A  Y     +++AT++V+    +    +FS  +YS    EN         V   
Sbjct: 738 FNLTVKAEDYGIPKLHSIATVVVNILDINDNPPEFSMRQYSCKVFENATQGTDVCKVYAA 797

Query: 64  LLTVTTNKPRDLRVKYWLSNDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDTL- 121
            + +  N   D+R  Y +S +   +FS+ S  G ++L   LDYE    Y  T+ A D   
Sbjct: 798 SIDIGVNA--DIRY-YIMSGNEQGKFSMDSMSGHLTLNASLDYEMSKFYFLTIQAIDGGT 854

Query: 122 --MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDK--GD 177
             ++ +A VN+S++++ND  P+F+   Y + +      D+  GS I  V A D D     
Sbjct: 855 PPLSNNAHVNVSILDINDNSPKFQQNLYRVNINE----DVLVGSKILDVNATDEDSDVNG 910

Query: 178 RVTLSL-RGPYEKMFSIN-DSGHISIVD-LSALNTSTIQLVVVATDTGNPPRQASVP 231
            VT S+ RG +   FSI+  +G I+I   L     S   L + A D G P R   VP
Sbjct: 911 LVTYSIERGDHIGQFSIDRKNGTIAISRPLDRETISHYNLEIQACDQGAPQRCNLVP 967



 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 41/135 (30%), Positives = 68/135 (50%), Gaps = 9/135 (6%)

Query: 79  YWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDW 138
           + +S D   +F I + G++ + + LD E    Y  +V ATD   T +A V I V+++ND 
Sbjct: 503 FIVSGDKQAQFQIGKSGELFIAKPLDREQIKFYNLSVIATDGKFTATANVEIDVMDINDN 562

Query: 139 DPRFRYPQYELFLPHIPLADLTP-GSVIGKVEAADGDKGDRVTLSLRGPYEKMFSIN-DS 196
            P    P+Y     HI   + TP G+ + +++A D D   ++   L G     F+I  +S
Sbjct: 563 MPFCLKPRY-----HITTNESTPIGTRLVEIKAVDLDLQSKLRFYLSGKGADDFAIGKES 617

Query: 197 GHISIVDLSALNTST 211
           G + +   SAL+  T
Sbjct: 618 GILKVA--SALDRET 630



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 56/221 (25%), Positives = 97/221 (43%), Gaps = 26/221 (11%)

Query: 47  KNEYSVSALENLPVNYVLLTVTTNKPRDL----RVKYWLSNDYGERFSISRQ-GDISLMQ 101
           K  Y ++  E+ P+   L+ +   K  DL    +++++LS    + F+I ++ G + +  
Sbjct: 568 KPRYHITTNESTPIGTRLVEI---KAVDLDLQSKLRFYLSGKGADDFAIGKESGILKVAS 624

Query: 102 CLDYETEDSYRFTVY---ATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLAD 158
            LD ET   Y+   +     D      + + I+V +VND  P F   QY + +P     D
Sbjct: 625 ALDRETNAKYKLIAHVQDGKDFSQECFSEIIITVTDVNDNIPVFSMNQYRVSVPE----D 680

Query: 159 LTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDSGHISIVD--LSALNTSTIQL 214
               ++I KV A D D G   ++  SL G     F I+ +  I  ++  L   + S   L
Sbjct: 681 AQLNTLITKVHAVDKDFGINRQIKYSLMGENHDFFRISKTTGIIKLEKNLDRESISLFNL 740

Query: 215 VVVATDTGNPPRQASVPAIMHF-------PEAIVQQASSKL 248
            V A D G P   +    +++        PE  ++Q S K+
Sbjct: 741 TVKAEDYGIPKLHSIATVVVNILDINDNPPEFSMRQYSCKV 781



 Score = 43.1 bits (100), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 47/163 (28%), Positives = 79/163 (48%), Gaps = 13/163 (7%)

Query: 78  KYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYA-TDTLMTTSATVNISVVNVN 136
           K+ L+ D  + F IS  G++ L Q LD E +DS+   V A T T+    A  ++ +++VN
Sbjct: 293 KFALAADQ-DNFMISDNGELILQQTLDREHQDSHHLIVVAETATVPVLFAYADV-LIDVN 350

Query: 137 DWDPRFRYPQYELFLPHIPLADLTPG-SVIGKVEAADGDKG--DRVTLSLRGPYEKMFSI 193
           D +    YP+++     + +A+ +   + + KV A D D G    +   L    E + +I
Sbjct: 351 DEND--NYPKFDNTFYSVSVAENSEKVNSLVKVSATDADAGPNGNIRYYLESDSENIQNI 408

Query: 194 ND----SGHISIVDLSALNT-STIQLVVVATDTGNPPRQASVP 231
            D    +G I+++ L      S     V+A+D G P   A VP
Sbjct: 409 FDIDIYTGWITLLTLLDREVQSEYNFKVIASDNGRPKHDAKVP 451



 Score = 41.6 bits (96), Expect = 0.70,   Method: Compositional matrix adjust.
 Identities = 54/190 (28%), Positives = 80/190 (42%), Gaps = 17/190 (8%)

Query: 44  QFSKNEYSVSALENL-PVNYVLLTVTTNKPR--DLRVKYWLSND---YGERFSIS-RQGD 96
           +F    YSVS  EN   VN ++    T+     +  ++Y+L +D       F I    G 
Sbjct: 358 KFDNTFYSVSVAENSEKVNSLVKVSATDADAGPNGNIRYYLESDSENIQNIFDIDIYTGW 417

Query: 97  ISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
           I+L+  LD E +  Y F V A+D           V I +V+ ND  P F+ P   L +  
Sbjct: 418 ITLLTLLDREVQSEYNFKVIASDNGRPKHDAKVPVTIKIVDYNDNAPAFKLPIERLSV-- 475

Query: 154 IPLADLTPGSVIGKVEAADGD--KGDRVTLSLRGPYEKMFSINDSGHISIVD-LSALNTS 210
             L +  PG+V+  +   D D  K +     + G  +  F I  SG + I   L      
Sbjct: 476 --LENALPGTVLINLLLIDPDIEKQEMDFFIVSGDKQAQFQIGKSGELFIAKPLDREQIK 533

Query: 211 TIQLVVVATD 220
              L V+ATD
Sbjct: 534 FYNLSVIATD 543



 Score = 40.0 bits (92), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 56/228 (24%), Positives = 97/228 (42%), Gaps = 21/228 (9%)

Query: 27  ALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDL----RVKYWLS 82
           A A L +S    ++   QF K+ Y     ENL   + ++TVT     D      + Y + 
Sbjct: 32  AYARLKISLLPENMYSPQFEKSNYEAKIPENLLHGHNVITVTATDG-DFGPYSNLYYEIV 90

Query: 83  NDYGERFSISRQ--GDISLMQCLDYETEDSYRFTVYATDTL-MTTSATVNISVVNVNDWD 139
           ++  ++F +  Q  G I+     D E +D Y   +  +D   +   AT+ +S+V+VND  
Sbjct: 91  SEEMKKFFVIDQTTGVITSRVTFDREKKDDYEVLLKVSDGGGLFGFATLKVSIVDVNDNV 150

Query: 140 PRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDR-------VTLSLRGPYEKMFS 192
           P F   +Y++ L     ++ T    I  V+A D D  +        V  S+      +  
Sbjct: 151 PYFPLKEYKIVLSTATESNKT----ILTVKAKDDDIKENGAINYKIVQKSIDEELNGLIQ 206

Query: 193 INDSGHISIVDLSALN--TSTIQLVVVATDTGNPPRQASVPAIMHFPE 238
           IN++    ++     N    + Q  V A+D G+P   + VP  +   E
Sbjct: 207 INENNGNIVLKREPGNYGAGSYQFFVRASDGGDPKFHSEVPVSIEIIE 254


>gi|397504069|ref|XP_003822631.1| PREDICTED: protocadherin-23-like [Pan paniscus]
          Length = 2770

 Score = 62.0 bits (149), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 77/301 (25%), Positives = 132/301 (43%), Gaps = 33/301 (10%)

Query: 11   ITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVN--------- 61
             TL V+A   + +  ++ A + V+    +    QF  + +S    ENLP++         
Sbjct: 2135 FTLTVQASDAEKK-HFSFAVVFVNVLDDNDHAPQFMFSSFSCIVPENLPISSTICSINAL 2193

Query: 62   ------YVLLTVTTNKPRDLRVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTV 115
                  Y  LT +   P    + + +S D+         GDI   Q LDYE  + Y  TV
Sbjct: 2194 DFDAGPYGELTYSIVSP--CFLTHGMSYDHDLFLIDPLTGDIHAKQILDYENGNKYCLTV 2251

Query: 116  YATDTL-MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGD 174
             A D    T S  V + +  +++++P F   QY   LP           +IG+VEA+D D
Sbjct: 2252 QAKDKGDATASLVVWVDIEGIDEFEPIFTQDQYFFTLPE----KNKDRQLIGRVEASDAD 2307

Query: 175  KG-DRVTLSLRGPYEKMFSINDS-GHISIVDL-----SALNTS-TIQLVVVATDTGNPPR 226
             G D V L   G     FS+N + G+I ++       S LN   T+++ ++A    +  +
Sbjct: 2308 AGIDGVILYSLGTSSPFFSVNKTNGNIYLIRALPLIKSQLNKEDTMEMKIIAHSPKSDSK 2367

Query: 227  QASVPAIMHFPEAIVQQASSKLNSGTSSTVLIILGVVLIVLGFVIILLILYIHKNKHTKN 286
             AS    ++   +      +   S  S ++++   V LI++  +I++++   HK K T N
Sbjct: 2368 FASCTVFVNVSFSSEGTPLAVFASSFSISLVVSFLVFLILICILIVMILR--HKQKDTIN 2425

Query: 287  N 287
            N
Sbjct: 2426 N 2426



 Score = 51.2 bits (121), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 55/201 (27%), Positives = 93/201 (46%), Gaps = 14/201 (6%)

Query: 38  TSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLR--VKYWLSN-DYGERFSIS-R 93
           T+L   +F + +Y+    E++P +  + TV   +P +    + Y +S+ D G +FSI  R
Sbjct: 224 TTLAPAEFERPKYTFLVYEDVPEDSPIGTVKAREPLNSSEPIFYRISSGDLGGKFSIHPR 283

Query: 94  QGDISLMQCLDYETEDSYRFTVYAT--DTLMTTSATVNISVVNVNDWDPRFRYPQYELFL 151
            G I   + LD+ET+     TV A        +S  VNI+V++VND  P F     E+ +
Sbjct: 284 LGTIRTRKPLDHETQPVVVLTVQAQLGSAPACSSTEVNITVMDVNDNHPAFLRTSDEIRI 343

Query: 152 PHIPLADLTPGSVIGKVEAADGDKGDR--VTLSLRGPYEKMFSINDSGHISIVD--LSAL 207
                    PG+ +    A D D G    +  S+  P   +F+I+ +  +  ++  L A 
Sbjct: 344 SQT----TPPGTALYLARAEDRDSGRNGLIRYSIASPQPGVFAIDRALGVLFLNGSLGAG 399

Query: 208 NTSTIQLVVVATDTGNPPRQA 228
               + L + A D G  P+ A
Sbjct: 400 EQRELTLTLRAEDQGVHPQAA 420



 Score = 48.5 bits (114), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 57/209 (27%), Positives = 94/209 (44%), Gaps = 30/209 (14%)

Query: 56   ENLPVNYVLLTVTTNKP---RDLRVKY-WLSNDYGERFSISRQGDISLMQC-LDYETEDS 110
            E++ V  ++  +T + P   R+ +V Y  LS +    F +     +    C LDYE +  
Sbjct: 1029 EDVTVGSLVHHITAHDPDEGRNGKVTYSILSGNENMTFMLDESSGLLTTTCPLDYEMKTQ 1088

Query: 111  YRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGK 167
            +  TV A D     +++S T+ ++V++VND  P F+   YE  +      +  PG  + +
Sbjct: 1089 HILTVLALDDGTPALSSSQTLTVTVLDVNDEAPVFKQHLYEASVKE----NQNPGEFVTR 1144

Query: 168  VEAADGDKGDRVTLSLR---GPYEKMFSIN-DSGHI---SIVDLSALNTSTIQLVVVATD 220
            VEA D D G    L      G   + F IN D+G +   +I+D       T++++V    
Sbjct: 1145 VEALDRDSGVNSKLQFEIMPGASFESFKINSDTGEVVTTTILDREIQEVFTLRVLV---R 1201

Query: 221  TGNPPRQASVPAIM--------HFPEAIV 241
             G  P  +S   I+        H PE IV
Sbjct: 1202 DGGFPSLSSTTTILCTVEDENDHAPEFIV 1230



 Score = 45.4 bits (106), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 43/148 (29%), Positives = 77/148 (52%), Gaps = 11/148 (7%)

Query: 86   GERFSISRQ-GDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRY 144
            G +F+I +  G + L++ LD+E    Y   +  +D++  T   + + V++VND  P F  
Sbjct: 1789 GTKFAIDQNTGVVVLVKTLDFEEMTEYELLIQISDSVHHTEGALVVRVLDVNDNPPVFSQ 1848

Query: 145  PQYELFLPH-IPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSIN-DSGHI-SI 201
              Y++ +P  IP+     G  +  + A D +  + ++  +     K FSI+  +G I +I
Sbjct: 1849 DFYQVTVPESIPV-----GYSVLTLSATDLESNENISYRILSS-SKEFSIDPKNGTIFTI 1902

Query: 202  VDLSALNT-STIQLVVVATDTGNPPRQA 228
              +  L+T ST Q +V A+D GNP  +A
Sbjct: 1903 SPVLLLDTISTTQFLVEASDGGNPDLRA 1930



 Score = 42.4 bits (98), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 51/197 (25%), Positives = 86/197 (43%), Gaps = 14/197 (7%)

Query: 50   YSVSALENLPVNYVLLTVTT-NKPRDL--RVKYWLSNDYGERFSIS-RQGDISLMQCLDY 105
            Y  S  E+  V  V+L ++  +K   L  + +Y+L+++    F+I    G +     LD 
Sbjct: 1337 YQSSVREDAEVGTVVLVLSAVDKDEGLNGQTEYFLTDEASGAFTIDPMSGTLKTSNTLDR 1396

Query: 106  ETEDSYRFTVYATDTLM----TTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTP 161
            E    + F+  A D  +    +T+  + + V +VND DP      +++FL   P +    
Sbjct: 1397 EARSQHTFSAVARDCSIQGSRSTTVIIKVYVTDVNDNDPVLEQNPFDVFL--FPQSPTNQ 1454

Query: 162  GSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSIND-SGHISIVDLSALNTSTIQLVVVAT 219
             +VI  V A D D G   T+       + MFSI+  +G I      +     I L +  T
Sbjct: 1455 TTVI--VRADDLDLGPNGTVVFSFAETQSMFSIDKYTGEIQFQQNPSSEYFPIWLQLKVT 1512

Query: 220  DTGNPPRQASVPAIMHF 236
            D G P R  +   ++H 
Sbjct: 1513 DQGIPARTTTGLLVIHM 1529



 Score = 40.8 bits (94), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 39/148 (26%), Positives = 67/148 (45%), Gaps = 19/148 (12%)

Query: 56   ENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTV 115
            EN  V Y +  ++ N   +  V+   +N +   +   + G + L+  LD E   S+   +
Sbjct: 1980 ENTYVEYSI--ISGNSQNNFHVE---TNFFHSEYPYKQVGYLVLLHSLDREASASHELVI 2034

Query: 116  YATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTP-GSVIGKVEAA 171
             A+D+    ++++A ++I V++VND  P F    Y     H  + + TP GS I  V A 
Sbjct: 2035 LASDSGCPPLSSTAVISIQVLDVNDNPPNFSSLSY-----HTHVKESTPLGSHITVVSAN 2089

Query: 172  DGDKGDRVTLSLRGPYEKMFSINDSGHI 199
            D D G    +        + S N+ GH 
Sbjct: 2090 DRDTGSHAEI-----IYNIISGNEKGHF 2112



 Score = 39.7 bits (91), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 40/153 (26%), Positives = 72/153 (47%), Gaps = 14/153 (9%)

Query: 87   ERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRF 142
            E F I S  G++     LD E ++ +   V   D     ++++ T+  +V + ND  P F
Sbjct: 1169 ESFKINSDTGEVVTTTILDREIQEVFTLRVLVRDGGFPSLSSTTTILCTVEDENDHAPEF 1228

Query: 143  RYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIND-SGH 198
                Y++ +    L +  P  V+  V A+D D G+   +    + G  ++ F+IN+ SG 
Sbjct: 1229 IVSSYDIEV----LENQEP-EVVYTVLASDMDAGNNRAVEYHIIDGNTDECFAINEMSGE 1283

Query: 199  ISIVD-LSALNTSTIQLVVVATDTGNPPRQASV 230
            +S    L     S   L ++ +D G+PPR + +
Sbjct: 1284 LSTTRALDREQISNFTLAILCSDLGDPPRSSVI 1316



 Score = 39.7 bits (91), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 33/93 (35%), Positives = 44/93 (47%), Gaps = 8/93 (8%)

Query: 49  EYSVSALENLPVNYVLLTVTTNKP---RDLRVKYWLSN-DYGERFSI-SRQGDISLMQCL 103
           E  V  LE  PVN ++ TV    P    +  V Y +S+ D  + F I +  G+I     L
Sbjct: 701 ELHVKVLEGQPVNMLVTTVFAKDPDEGNNAEVTYSVSSEDSSDHFKIDANSGEIRTTTIL 760

Query: 104 DYETEDSYRFTVYATDT---LMTTSATVNISVV 133
            Y+   SYR TV ATD     +   A VNI V+
Sbjct: 761 SYDYRPSYRMTVIATDQGVPPLQGQAVVNIQVI 793



 Score = 39.3 bits (90), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 30/86 (34%), Positives = 40/86 (46%), Gaps = 8/86 (9%)

Query: 95  GDISLMQCLDYETEDSYRFTVYA----TDTLMTTSATVNISVVNVNDWDPRFRYPQYELF 150
           G I L +  DYE+  +Y F V+A       L   S TV + V + ND  P F +    L 
Sbjct: 495 GWIYLRRQFDYESTQTYNFRVFAWIPEDGFLQNVSTTVIVRVWDENDNSPTFLHDVLFLK 554

Query: 151 LPHIPLADLTPGSVIGKVEAADGDKG 176
           +   P+    P  VIGK+ A D D G
Sbjct: 555 VEESPV----PQGVIGKITAIDMDSG 576



 Score = 38.1 bits (87), Expect = 7.3,   Method: Compositional matrix adjust.
 Identities = 37/140 (26%), Positives = 61/140 (43%), Gaps = 13/140 (9%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRD----LRVKYWL--SNDYGERFSISRQGDIS 98
            FS   Y     E+ P+   +  V+ N  RD      + Y +   N+ G  +     G + 
Sbjct: 2064 FSSLSYHTHVKESTPLGSHITVVSAND-RDTGSHAEIIYNIISGNEKGHFYLEENTGVLY 2122

Query: 99   LMQCLDYETEDSYRFTVYATDTLMT--TSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
            L++ LDYE    +  TV A+D      + A V ++V++ ND  P+F +  +   +P    
Sbjct: 2123 LIKPLDYEEMTKFTLTVQASDAEKKHFSFAVVFVNVLDDNDHAPQFMFSSFSCIVPE--- 2179

Query: 157  ADLTPGSVIGKVEAADGDKG 176
             +L   S I  + A D D G
Sbjct: 2180 -NLPISSTICSINALDFDAG 2198


>gi|432961282|ref|XP_004086589.1| PREDICTED: protocadherin Fat 4-like [Oryzias latipes]
          Length = 4971

 Score = 62.0 bits (149), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 65/198 (32%), Positives = 96/198 (48%), Gaps = 23/198 (11%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGERFSIS-RQGDISL 99
            +FSK  +S +  EN PV Y +  VTT   +   +   +Y L+ D G  FSI+   GDI++
Sbjct: 2749 RFSK-IFSATVAENAPVGYTVTRVTTTDEDAGSNAISRYSLT-DSGLPFSINPNTGDITI 2806

Query: 100  MQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADL 159
             + L+ E  D Y   V A D+  T S  V I + +VND  PRF  P Y L  P   L ++
Sbjct: 2807 NRPLNREETDHYIVKVSAHDSGWTVSTDVTIFITDVNDNVPRFTRPSYYLEYPE--LTEI 2864

Query: 160  TPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDS-GHISI---------VDLSAL 207
              GS++ +V A D D+G   ++   +R   E  F IN S G + +            S+L
Sbjct: 2865 --GSLVTQVSAVDPDEGFNGKIFYFIRSQSE-YFRINASTGEVFVKQQLKYQNSTGASSL 2921

Query: 208  NTSTIQLVVVATDTGNPP 225
            N +    +V A+D    P
Sbjct: 2922 NINRHSFIVTASDRAVKP 2939



 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 61/227 (26%), Positives = 108/227 (47%), Gaps = 9/227 (3%)

Query: 13  LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVT-TNK 71
           L VRA        +  A + V+   T      FS+  YS    EN+    V+ TV+ T  
Sbjct: 738 LQVRATDGGGLSSHTHAFVTVTVTDTQDNPPVFSQENYSFVMFENVSPGTVIGTVSATTV 797

Query: 72  PRDLRVKYWL-SNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNI 130
             +  + Y + S D    F+++  G I+    +D E +  Y+  V A    +T  A VNI
Sbjct: 798 DLNSNISYLITSGDQRGLFAVNGAGQITASSLIDREEKGFYQLKVVARAGEITGEAFVNI 857

Query: 131 SVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYE 188
           +V ++ND  PRF +    +      + + + G +I + +A+D D+G    V  SL+   +
Sbjct: 858 TVRDLNDNAPRFLHAAEHVSA----VENWSTGHIIFQAKASDPDEGLNGVVVYSLKENPK 913

Query: 189 KMFSINDS-GHISIVDLSALNTSTIQLVVVATDTGNPPRQASVPAIM 234
            +F I++  G I++      +T++ ++ V A+D G P R +S+  I+
Sbjct: 914 GLFHIHEKHGLITLTGSLKASTNSYEVEVTASDMGVPQRTSSLSLII 960



 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 58/214 (27%), Positives = 103/214 (48%), Gaps = 35/214 (16%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGE-RFSI-SRQGDIS 98
            +F+K+ Y  S  E+ P    LL V+    ++ ++  V Y ++    E +F+I S  G ++
Sbjct: 1185 KFTKDIYQASISESAPNMTQLLRVSASDVDESKNGVVHYHIAEGNEEAQFTIDSSSGQVT 1244

Query: 99   LMQCLDYETEDSYRFTVYATDTL---MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIP 155
            L+  LDYE+  SY   + A D     +++S  ++IS+++ ND  P F  P+  L +    
Sbjct: 1245 LVGKLDYESSSSYLLKIIADDAGDVPLSSSCMLSISILDENDNSPSF--PKSSLSVD--V 1300

Query: 156  LADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSGHISIVDLSALNTSTIQLV 215
            L ++  G ++  V A D D G    ++       + +IN+ G  SI    + NT +I LV
Sbjct: 1301 LENMRIGDLVVSVTATDADSGQNADITY-----SITAINNHGTFSI----SPNTGSIFLV 1351

Query: 216  --------------VVATDTGNPPRQASVPAIMH 235
                          + A D G P R +S+P +++
Sbjct: 1352 KKLDYETQSFYKLNITAKDNGRPARSSSIPVVVY 1385



 Score = 55.1 bits (131), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 72/269 (26%), Positives = 113/269 (42%), Gaps = 42/269 (15%)

Query: 2    INEDD-----FLQPITLV---VRAIQYDNQDRYALATLIVSKAGTSLRELQ--------- 44
            + EDD      L P+T V    RA+ Y+ Q RY + T      G     ++         
Sbjct: 1859 LEEDDEDGTFLLNPVTGVFNVTRALDYETQ-RYYILTAKAHDGGGLASTVRVYFNVLDIN 1917

Query: 45   -----FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWL----SNDYGERFSISRQG 95
                 FS + YS S  E+LP    ++TV  +   D      L    S D    F I+++G
Sbjct: 1918 DNPPVFSSSAYSTSVSESLPPGSSIVTVEASDGDDGANAQLLYKIASGDPQGHFVITKEG 1977

Query: 96   DISLMQCLDYETEDSYRFTVYATD------TLMTTSATVNISVVNVNDWDPRFRYPQYEL 149
             +   + LD E++  Y   +   D         T++A V+I +++VND  P F   +   
Sbjct: 1978 VLQTQKALDRESQSFYNLVITVNDLAPPPAARFTSTAQVSIILLDVNDCPPIFTSQKTTY 2037

Query: 150  FLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIND-SGHISIV-DLS 205
               + P+      +V+   +A D D G    V  SLRG ++  F I    G + ++ +L 
Sbjct: 2038 IQENTPV-----DTVVFTAQATDADSGPNSYVEYSLRGQHQNKFIIGTVDGDVRLIGELD 2092

Query: 206  ALNTSTIQLVVVATDTGNPPRQASVPAIM 234
                S   + VVATD G PP  +S+   M
Sbjct: 2093 REELSNYTVTVVATDKGVPPLSSSMDVTM 2121



 Score = 52.4 bits (124), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 39/135 (28%), Positives = 64/135 (47%), Gaps = 10/135 (7%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNK----PRDLRVKYWLSNDYGERFSIS-RQGDISL 99
            F+ +   V+  EN+   + ++ +T       P  L V Y + +   + F I    GD+  
Sbjct: 1719 FANDVLDVTIEENIIDGFKIMQLTAKDADEGPNAL-VTYTIISGADDSFRIDPESGDLIA 1777

Query: 100  MQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADL 159
             + LD E    Y   V A D   ++   +NI+V +VND  P+F  P Y   +P     D+
Sbjct: 1778 TKKLDRERRSKYSLLVRADDGKQSSDMRLNITVKDVNDHTPKFSRPTYSFDIPE----DV 1833

Query: 160  TPGSVIGKVEAADGD 174
            TPGS++  + A+D D
Sbjct: 1834 TPGSIVEVILASDSD 1848



 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 43/140 (30%), Positives = 63/140 (45%), Gaps = 10/140 (7%)

Query: 103  LDYETEDSYRFTVYATD----TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLAD 158
            LD E   +Y+  V ATD      +++SATV+++V ++ND  PRF +  Y   + HIP A 
Sbjct: 2400 LDREERANYQLLVVATDGGQPKGLSSSATVSVTVADINDNPPRFHHHPY---VTHIP-AS 2455

Query: 159  LTPGSVIGKVEAADGDKGDRVTL--SLRGPYEKMFSINDSGHISIVDLSALNTSTIQLVV 216
               G+++  V   D D G    L  SL G   + F I+              +S + L V
Sbjct: 2456 TAAGALVFAVTVTDEDAGSNAQLQYSLMGRNAEKFKIDPVRGAITASERLTGSSEVTLAV 2515

Query: 217  VATDTGNPPRQASVPAIMHF 236
               D G  PR  S    + F
Sbjct: 2516 RVKDGGTNPRTDSTTVTVRF 2535



 Score = 51.6 bits (122), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 57/190 (30%), Positives = 89/190 (46%), Gaps = 15/190 (7%)

Query: 56   ENLPVNYVLLTVTTNKPRDLRVKYWL-SNDYGERFSISR-QGDISLMQCLDYETEDSYRF 113
            EN P N+V+ TVT +  R   + +++ S +    F I +  G++S+   LDYE    Y  
Sbjct: 2555 ENQPNNHVVTTVTGSSLRGGPLSFYIASGNLDNAFHIDQLSGELSIRHPLDYECIQKYVL 2614

Query: 114  TVYATDTLM---TTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEA 170
             + A D      ++   V I+V++VND  P F    +   +    L +L P  V+  V A
Sbjct: 2615 WIEARDQGFPPYSSYEKVEITVLDVNDNLPVFDKDPFNAEI----LENLPPQQVL-LVSA 2669

Query: 171  ADGDKGDRVTLS---LRGPYEKMFSINDS-GHISI-VDLSALNTSTIQLVVVATDTGNPP 225
             D DKG    L    + G  + +FSI+ + G I     L     +   L V ATD G+PP
Sbjct: 2670 VDLDKGSNGQLEYAIIDGNKDNIFSIHRATGEIRTNRPLDREKVALYSLKVKATDRGSPP 2729

Query: 226  RQASVPAIMH 235
            +  SV  ++ 
Sbjct: 2730 KSTSVKVLVR 2739



 Score = 51.2 bits (121), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 62/217 (28%), Positives = 99/217 (45%), Gaps = 22/217 (10%)

Query: 25   RYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTV-TTNKPRDL--RVKYWL 81
            R +  +LI+S    +     F +  Y V  LE+ PVN     V  T+K   L   + Y +
Sbjct: 952  RTSSLSLIISVYDVNDNSPMFDQLSYEVIILESEPVNSRFFKVEATDKDSGLNGEIMYDI 1011

Query: 82   S-NDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDTLMTT-SATVNISVV--NVND 137
            +  + G+ F I   G + +   LD E +D Y   V A D  +   SA+VN++V+  +VND
Sbjct: 1012 AGGNTGDMFGIFPDGQLYIKAELDREVQDRYNLVVVAKDRAVEPLSASVNVTVILDDVND 1071

Query: 138  WDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIND 195
              P F    Y          +   GS++G+V A D D G    +  S   P +  F +N 
Sbjct: 1072 NRPLFNSTNYVFHFKE----EQQRGSLVGQVFAEDKDFGPNSEIRYSFETP-QHNFELNT 1126

Query: 196  -SGHISI---VDLSAL----NTSTIQLVVVATDTGNP 224
             +G ++    +D  +L     T+ +  VVV++D G P
Sbjct: 1127 ITGELTSTLKLDRESLMRQRGTAVLSFVVVSSDQGLP 1163



 Score = 51.2 bits (121), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 56/192 (29%), Positives = 94/192 (48%), Gaps = 15/192 (7%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDL---RVKYWLSN-DYGERFSI-SRQGDISL 99
            FS+N Y +   EN+     ++ V  +   D    ++++ +S+ +    F I S  G IS+
Sbjct: 2133 FSQNIYDIEVEENILTGTDVIQVFASDADDGSNGQIRFSISSGNTNSDFRIDSVTGVISV 2192

Query: 100  MQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
             + LD ET  +Y   V A D   +     ATVNI +++VND  P F    Y + +    L
Sbjct: 2193 AKRLDRETRSAYSLVVQAADRGSSPRVDHATVNIVLLDVNDCSPLFELSPYTINVQE-NL 2251

Query: 157  ADLTPGSVIGKVEAADGDKGDRVTLSLR---GPYEKMFSINDSGHISIVD-LSALNTSTI 212
             +L P  ++ +V A D D+G    LS     G  E  F+++ +G +S+   L     +  
Sbjct: 2252 ENL-PKDIL-QVVARDDDQGANSQLSYMLSGGDEEGAFTLSSAGQLSVTKTLDREFGAEY 2309

Query: 213  QLVVVATDTGNP 224
             L++ ATD+G+P
Sbjct: 2310 TLLITATDSGSP 2321



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 64/233 (27%), Positives = 101/233 (43%), Gaps = 29/233 (12%)

Query: 13   LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKP 72
            L V+A    ++DR + A + +   G +    +F   +Y     E  P   V+  V  +  
Sbjct: 3243 LTVKAFNIPDEDRCSFANVNIQLKGANEYVPRFVSKQYYFEVSEAAPKGTVVGEVFASD- 3301

Query: 73   RDLR---VKYWL--SNDYGERFSISRQ-GDISLMQCLDYETEDSYRFTVYATDTLMTTSA 126
            RD     V Y+L       + FSI+++ G I +   LD E E+     V A +      A
Sbjct: 3302 RDQGEDGVVYYLIFGKSRNKGFSINKKTGQIYVTGMLDREKEEKISLKVLAKNAGSIRGA 3361

Query: 127  T-----VNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTL 181
                  VNI++++ ND  P F    Y++ +       L+PG ++  V+A   D  D V  
Sbjct: 3362 DIDEVFVNITILDAND-PPVFTQDLYDVQVSE----GLSPGDLVTFVKA---DDSDSVPS 3413

Query: 182  SLRGPY-------EKMFSIN-DSGHISIV-DLSALNTSTIQLVVVATDTGNPP 225
              R  Y       + MF+IN  +G +S+  +L    T    L V+A DTG PP
Sbjct: 3414 WSRFSYFIDPELTKNMFTINPKTGQVSVAAELDRETTPVYNLTVLAVDTGTPP 3466



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 56/184 (30%), Positives = 87/184 (47%), Gaps = 18/184 (9%)

Query: 56   ENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGERFSISR-QGDISLMQCLDYETEDSY 111
            EN PV+ V+ T      +   +  V+Y L   +  +F I    GD+ L+  LD E   +Y
Sbjct: 2040 ENTPVDTVVFTAQATDADSGPNSYVEYSLRGQHQNKFIIGTVDGDVRLIGELDREELSNY 2099

Query: 112  RFTVYATDTL---MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKV 168
              TV ATD     +++S  V + V++VND  P F    Y++ +      ++  G+ + +V
Sbjct: 2100 TVTVVATDKGVPPLSSSMDVTMIVLDVNDNTPSFSQNIYDIEVEE----NILTGTDVIQV 2155

Query: 169  EAADGDKGD----RVTLSLRGPYEKMFSIND-SGHISIVD-LSALNTSTIQLVVVATDTG 222
             A+D D G     R ++S  G     F I+  +G IS+   L     S   LVV A D G
Sbjct: 2156 FASDADDGSNGQIRFSIS-SGNTNSDFRIDSVTGVISVAKRLDRETRSAYSLVVQAADRG 2214

Query: 223  NPPR 226
            + PR
Sbjct: 2215 SSPR 2218



 Score = 47.0 bits (110), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 57/217 (26%), Positives = 95/217 (43%), Gaps = 34/217 (15%)

Query: 55   LENLPVNYV-LLTVTTNKPRDLRVKYWLSN-DYGERFSISRQGDISLMQCLDYETEDSYR 112
            LENLP + + ++    ++  + ++ Y LS  D    F++S  G +S+ + LD E    Y 
Sbjct: 2251 LENLPKDILQVVARDDDQGANSQLSYMLSGGDEEGAFTLSSAGQLSVTKTLDREFGAEYT 2310

Query: 113  FTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTP-GSVIGKV 168
              + ATD+    ++ + TV + V +VND  P F    +     H  +A+  P G+ +  V
Sbjct: 2311 LLITATDSGSPALSGTGTVTVLVDDVNDNVPVFSSSTF-----HTTIAEDAPTGTDVLLV 2365

Query: 169  EAADGDKGDRVTLSLRG-PYEKMFSINDSGHISIVDLSALNTSTIQLVVVATDTG----- 222
             ++D D G  +  ++R  P   + + +    IS   L     +  QL+VVATD G     
Sbjct: 2366 NSSDADVG--INGAVRYIPVTFLINCSRRQIISSALLDREERANYQLLVVATDGGQPKGL 2423

Query: 223  ---------------NPPRQASVPAIMHFPEAIVQQA 244
                           NPPR    P + H P +    A
Sbjct: 2424 SSSATVSVTVADINDNPPRFHHHPYVTHIPASTAAGA 2460



 Score = 43.5 bits (101), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 59/190 (31%), Positives = 81/190 (42%), Gaps = 16/190 (8%)

Query: 52   VSALENLPVNYVLLTVTTNKPRDLR---VKYWLSNDYGERFSI-SRQGDISLMQCLDYET 107
            VSA+EN    +++     + P +     V Y L  +    F I  + G I+L   L   T
Sbjct: 876  VSAVENWSTGHIIFQAKASDPDEGLNGVVVYSLKENPKGLFHIHEKHGLITLTGSLKAST 935

Query: 108  EDSYRFTVYATDTLM---TTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSV 164
             +SY   V A+D  +   T+S ++ ISV +VND  P F    YE+ +    L      S 
Sbjct: 936  -NSYEVEVTASDMGVPQRTSSLSLIISVYDVNDNSPMFDQLSYEVII----LESEPVNSR 990

Query: 165  IGKVEAADGDKG--DRVTLSLRGPYE-KMFSINDSGHISI-VDLSALNTSTIQLVVVATD 220
              KVEA D D G    +   + G     MF I   G + I  +L         LVVVA D
Sbjct: 991  FFKVEATDKDSGLNGEIMYDIAGGNTGDMFGIFPDGQLYIKAELDREVQDRYNLVVVAKD 1050

Query: 221  TGNPPRQASV 230
                P  ASV
Sbjct: 1051 RAVEPLSASV 1060



 Score = 43.1 bits (100), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 55/170 (32%), Positives = 83/170 (48%), Gaps = 22/170 (12%)

Query: 45   FSKNEYSVSALENLPVNYVLL--TVTTNKPRDLRVKYWLSNDYGER-FSISRQ-GDISLM 100
            F K+ ++   LENLP   VLL   V  +K  + +++Y + +   +  FSI R  G+I   
Sbjct: 2646 FDKDPFNAEILENLPPQQVLLVSAVDLDKGSNGQLEYAIIDGNKDNIFSIHRATGEIRTN 2705

Query: 101  QCLDYETEDSYRFTVYATDTL---MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLA 157
            + LD E    Y   V ATD      +TS  V + V++VND  PRF     ++F   +  A
Sbjct: 2706 RPLDREKVALYSLKVKATDRGSPPKSTSVKVLVRVLDVNDNAPRFS----KIFSATV--A 2759

Query: 158  DLTP-GSVIGKVEAADGDKG----DRVTLSLRGPYEKMFSIN-DSGHISI 201
            +  P G  + +V   D D G     R +L+  G     FSIN ++G I+I
Sbjct: 2760 ENAPVGYTVTRVTTTDEDAGSNAISRYSLTDSG---LPFSINPNTGDITI 2806



 Score = 42.4 bits (98), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 56/197 (28%), Positives = 82/197 (41%), Gaps = 24/197 (12%)

Query: 44   QFSKNEYSVSALENL-PVNYVLLTVTTNKPRDL--RVKYWLSNDY--GERFSISRQGDIS 98
            +FS+  YS    E++ P + V + + ++   +L   V Y L  D   G        G  +
Sbjct: 1819 KFSRPTYSFDIPEDVTPGSIVEVILASDSDSELNGEVNYSLEEDDEDGTFLLNPVTGVFN 1878

Query: 99   LMQCLDYETEDSYRFTVYATDTL-MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLA 157
            + + LDYET+  Y  T  A D   + ++  V  +V+++ND  P F    Y   +      
Sbjct: 1879 VTRALDYETQRYYILTAKAHDGGGLASTVRVYFNVLDINDNPPVFSSSAYSTSVSE---- 1934

Query: 158  DLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSGHISIVDLSALNT-------- 209
             L PGS I  VEA+DGD G    L       K+ S +  GH  I     L T        
Sbjct: 1935 SLPPGSSIVTVEASDGDDGANAQL-----LYKIASGDPQGHFVITKEGVLQTQKALDRES 1989

Query: 210  -STIQLVVVATDTGNPP 225
             S   LV+   D   PP
Sbjct: 1990 QSFYNLVITVNDLAPPP 2006



 Score = 40.8 bits (94), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 47/144 (32%), Positives = 60/144 (41%), Gaps = 23/144 (15%)

Query: 97  ISLMQCLDYETEDSYRFTVYATDT----LMTTSATVNISVVNVNDWDPRFRYPQYELFLP 152
           I +   LD E   SY  TV  +D       ++ A++ I V ++ND  P F   Q EL+  
Sbjct: 404 IKVASLLDRERISSYNLTVSVSDNGRPMARSSFASLVIFVNDINDHPPIF---QEELYRV 460

Query: 153 HIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSGHISIVDLSALNTST- 211
            I   D+  GS I  V A DGD G    L        + S N  G  SI D S L TS  
Sbjct: 461 DIS-EDIPKGSYIKGVSATDGDSGQNANLRY-----SLVSGNSLGWFSISDNSGLVTSAA 514

Query: 212 ---------IQLVVVATDTGNPPR 226
                    I L + A D G  P+
Sbjct: 515 LLDREVASEIVLNISAKDQGLQPK 538



 Score = 40.4 bits (93), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 39/147 (26%), Positives = 72/147 (48%), Gaps = 12/147 (8%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTT-NKPRDLR--VKYWLS--NDYGERFSISRQGDIS 98
            +FS+++ S +  E+L V   + TV+  +K +++   + Y ++  ND G     S+ G +S
Sbjct: 3065 EFSQSQISATVPESLAVGTAIRTVSAKDKDKEMNGLITYNITSGNDNGVFMLNSKTGVLS 3124

Query: 99   LMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIP 155
            L   LD+E +  +   V A D      T+  +V I V +VND  P F   +Y    P + 
Sbjct: 3125 LANPLDFEEKQQHELRVSAIDGGWIAKTSYVSVTIQVTDVNDNPPIFDPDEY---FPTV- 3180

Query: 156  LADLTPGSVIGKVEAADGDKGDRVTLS 182
              ++  G+ + ++ A D D G    ++
Sbjct: 3181 QENVPSGTTVVRMNATDRDSGPNAVMA 3207



 Score = 40.0 bits (92), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 34/107 (31%), Positives = 58/107 (54%), Gaps = 10/107 (9%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLS--NDYGERFSIS-RQGDIS 98
            F K+  SV  LEN+ +  ++++VT    +  ++  + Y ++  N++G  FSIS   G I 
Sbjct: 1291 FPKSSLSVDVLENMRIGDLVVSVTATDADSGQNADITYSITAINNHGT-FSISPNTGSIF 1349

Query: 99   LMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRF 142
            L++ LDYET+  Y+  + A D      ++S  V + V + ND  P F
Sbjct: 1350 LVKKLDYETQSFYKLNITAKDNGRPARSSSIPVVVYVRDFNDNPPVF 1396


>gi|351710309|gb|EHB13228.1| Cadherin EGF LAG seven-pass G-type receptor 1 [Heterocephalus
           glaber]
          Length = 3064

 Score = 62.0 bits (149), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 61/229 (26%), Positives = 105/229 (45%), Gaps = 22/229 (9%)

Query: 13  LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTT--- 69
           L V A+ +    R A   L V+ + T+     F ++EY     ENL V Y +LT+     
Sbjct: 149 LKVSALDHGTPRRSAATYLTVTVSDTNDHSPVFEQSEYRERVRENLEVGYEVLTIRATDG 208

Query: 70  NKPRDLRVKYWLSNDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDT-----LMT 123
           + P +  ++Y L    G  F I +R G +     +D E    Y+  V A D       ++
Sbjct: 209 DAPSNANMRYRLLEGAGGVFEIDARSGVVRTRAVVDREEAAEYQLLVEANDQGRNPGPLS 268

Query: 124 TSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS- 182
            +ATV+I V + ND  P+F   +Y + +P     D+   + + +V+A D D+G    +  
Sbjct: 269 ATATVHIVVEDENDNYPQFSEKRYVVQVPE----DVAVNTPVLRVQATDRDQGQNAAIHY 324

Query: 183 --LRGPYEKMFSIND-SGHISIV---DLSALNTSTIQLVVVATDTGNPP 225
             + G  +  F ++  SG + ++   D  A+   T++  + A D G PP
Sbjct: 325 SIVSGNLKGQFYLHSLSGSLDVINPLDFEAIREYTLR--IKAQDGGRPP 371



 Score = 48.9 bits (115), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 49/166 (29%), Positives = 75/166 (45%), Gaps = 29/166 (17%)

Query: 45  FSKNEYSVSALENLPVNYVLL---TVTTNKPRDLRVKYWL---------SNDYGER---- 88
           F  + +  + LEN+P+ + +L    V  +   + R++Y L          +  G      
Sbjct: 393 FVSSPFQATVLENVPLGHSVLHIQAVDADAGENSRLRYRLVDTSSAALGGDSAGPEDPDS 452

Query: 89  -----FSI-SRQGDISLMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWD 139
                F I +  G I++   LD E  + Y F V A D     M++SA+V+I+V++VND D
Sbjct: 453 TLDFPFQIHNSSGWITVCAELDREEVEHYSFGVEAVDHGSPPMSSSASVSITVLDVNDND 512

Query: 140 PRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRG 185
           P F  P YEL L      D   GS +  + A D D    +T  L G
Sbjct: 513 PVFTQPLYELRLNE----DAAVGSSVLTLRARDRDANSVITYQLTG 554



 Score = 45.8 bits (107), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 51/189 (26%), Positives = 86/189 (45%), Gaps = 14/189 (7%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRDLR--VKYWLSN-DYGERFSISRQ---GDIS 98
           F++  Y +   E+  V   +LT+   + RD    + Y L+  +   RF++S Q   G I+
Sbjct: 515 FTQPLYELRLNEDAAVGSSVLTLRA-RDRDANSVITYQLTGGNTRNRFALSSQSGGGLIT 573

Query: 99  LMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLAD 158
           L   LDY+ E  Y   V A+D   + +  V I+V + N   P F+   Y + +      D
Sbjct: 574 LALPLDYKQERQYVLAVTASDGTRSHTVQVFINVTDANTHRPVFQSSHYTVSVSE----D 629

Query: 159 LTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSINDSGHI-SIVDLSALNTSTIQLV 215
              G+ I  + A D D G+  R+T  L  P  +     ++G I ++ +L   + +   L 
Sbjct: 630 RPVGTSIATISATDEDTGENARITYVLEDPVPQFRIDPNTGTIYTMTELDYEDQAAYTLA 689

Query: 216 VVATDTGNP 224
           + A D G P
Sbjct: 690 ITAQDNGIP 698



 Score = 45.8 bits (107), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 50/206 (24%), Positives = 92/206 (44%), Gaps = 29/206 (14%)

Query: 7   FLQPITLVVRA---IQYDNQDRYALATLIVSK----AGTSLRELQ------------FSK 47
           +++P + V+R    +  +N   Y+L  L V +    A ++  E+Q            F +
Sbjct: 770 YIEPTSGVIRTQRRLDRENVAVYSLRALAVDRGSPAALSASVEIQVTVLDINDNPPVFER 829

Query: 48  NEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWL-SNDYGERFSISR-QGDISLMQC 102
           +E  +   EN PV  V+  +  N P +    ++ Y +   +  E F +    GD+  +  
Sbjct: 830 DELELFVEENSPVGSVVAKIRANDPDEGPNAQIMYQIVEGNMPEVFQLDLLSGDLRALAE 889

Query: 103 LDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPH--IPLADLT 160
           LD+E    Y   V AT   + + ATV I +++ ND  P    P +++   +     ++  
Sbjct: 890 LDFEVRRDYVLVVQATSAPLVSRATVRIHLLDQNDNPPEL--PDFQILFNNYVTNKSNSF 947

Query: 161 PGSVIGKVEAADGDKGDRVTLS-LRG 185
           P  +IG++ A D D  D +  + LRG
Sbjct: 948 PSGIIGRIPAHDPDLSDNLNYTFLRG 973


>gi|334329182|ref|XP_003341195.1| PREDICTED: protocadherin-16 [Monodelphis domestica]
          Length = 3184

 Score = 62.0 bits (149), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 54/155 (34%), Positives = 79/155 (50%), Gaps = 14/155 (9%)

Query: 89   FSISRQGD-ISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQY 147
            FS+ R G  ISL + LD+E  D Y+  + A D     SA + + V +VND  P F    Y
Sbjct: 2203 FSVGRYGGRISLTEPLDFEHMDCYQLHLLARDGQHEGSANLTVQVEDVNDNAPTFSQSLY 2262

Query: 148  ELFLPHIPLADLTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSINDS-GHISIVDL 204
            ++ LP       TPGS I  + A D D GD  R++  L    E  F I+ S G + +++ 
Sbjct: 2263 QVTLPE----HTTPGSAILTISATDLDSGDNGRISYHLVSTAEG-FDIDPSNGTLFMMEA 2317

Query: 205  SALNT---STIQLVVVATDTGNPPRQASVPAIMHF 236
            ++L+     T+ +V+ A D G P R A   AI+H 
Sbjct: 2318 ASLSPGGLGTMDMVLEARDHGIPGRTAQ--AIVHI 2350



 Score = 58.9 bits (141), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 67/235 (28%), Positives = 111/235 (47%), Gaps = 16/235 (6%)

Query: 12   TLVVRAIQYDNQDRY-ALATLIVSKAGTSLRELQFSKNEYSVSALENLP----VNYVLLT 66
            TL V A+  D Q    A AT+ VS    +    + ++    ++  EN P      ++  T
Sbjct: 950  TLPVLAVAGDAQGSLTATATVRVSIRDRNDHGPRLTEEPTFLAVAENQPPGTTAGHITAT 1009

Query: 67   VTTNKPRDLRVKYWLSN-DYGERFSISRQ-GDISLMQCLDYETEDSYRFTVYATDTLM-- 122
               + P      + L   D    F I  Q G+++  + LD E + SY+  V   D  +  
Sbjct: 1010 DRDSGPNGHLTYHLLQPPDESGAFHIHPQTGEVTTRRSLDREQQSSYQLLVQVQDGGVPP 1069

Query: 123  -TTSATVNISVVNVNDWDPRFRY--PQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRV 179
             +T+ TV+I V+++ND  P F +        LP   L  + PG+++ +++A D D+G+  
Sbjct: 1070 RSTTGTVHIMVLDLNDNSPTFLHTLGAAGGGLPVQVLEGIAPGTLVTRLQAKDPDEGENG 1129

Query: 180  TL--SLRGPYEKMFSIN-DSGHISIVD-LSALNTSTIQLVVVATDTGNPPRQASV 230
            T+  S+ GP  ++F ++  SG +S    LS L      L V A D G+PPR  S+
Sbjct: 1130 TILYSVTGPGSELFLLHPHSGELSTAGPLSRLERPHYVLTVNAQDQGSPPRSTSL 1184



 Score = 58.9 bits (141), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 59/201 (29%), Positives = 87/201 (43%), Gaps = 17/201 (8%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDL---RVKYWLSNDYGERFSIS-RQGDISLM 100
            F+   Y+V   E+ P+  +LL +    P D    RV Y+L       F +    G++   
Sbjct: 1733 FTAPSYAVEVPEDAPIGTLLLQLEARDPDDGANGRVAYYLGEGAAGAFLLEPGSGELRTA 1792

Query: 101  QCLDYETEDSYRFTVYATDTL----MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
              LD E E  Y F V+A D      ++ S +V ++V +VND  P F      L L     
Sbjct: 1793 VPLDREREARYGFVVHAVDGAAAGPLSASVSVTVTVRDVNDHAPAFPASPLRLRLRSART 1852

Query: 157  ADLTPGS----VIGKVEAADGDKGDRVTL--SLRGPYEKMFSIND-SGHISIVD-LSALN 208
            A L  GS     +  + A D D G   ++   L GP     S++  +G I +    +AL 
Sbjct: 1853 A-LGQGSSGPHALAILRAEDRDAGANASILYRLAGPAPPGASVDSYTGEIRLAHPPAALG 1911

Query: 209  TSTIQLVVVATDTGNPPRQAS 229
                 L +VATD G P R A+
Sbjct: 1912 PRDRVLFIVATDLGRPARSAT 1932



 Score = 51.2 bits (121), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 64/227 (28%), Positives = 101/227 (44%), Gaps = 20/227 (8%)

Query: 13   LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLT--VTTN 70
            L + A       R A   ++V   G + R  +F +     +  E+ P   ++++   T  
Sbjct: 1917 LFIVATDLGRPARSATGVVVVGLQGETERGPRFPRPSSEAALPEDAPPGTLIVSPQATHA 1976

Query: 71   KPRDLRVKYW-LSNDYGERFSIS-RQGDISLMQC--LDYETEDSYRFTVYATDTLMTTSA 126
                  + Y  LS +  + FSI    G +S+     LD+ET    R  + A         
Sbjct: 1977 GGSTGAITYSILSGNEHDLFSIEPSTGALSVKAAGGLDFETSPRLRLVLQAESGGSFGFT 2036

Query: 127  TVNISVVNVNDWDPRFRYPQYELFLPHI-PLADLTPGSVIGKVEAADGDK--GDRVTLSL 183
             + +S+ + ND  PRF  P Y  F+P   PL+    G ++ KVEA D D+  G +VT SL
Sbjct: 2037 VLTLSLQDANDNAPRFLKPHYAAFVPESRPLS----GPLL-KVEADDLDQGPGGQVTYSL 2091

Query: 184  --RGPYEKMFSINDSGHISIVDLSALNT---STIQLVVVATDTGNPP 225
                P   +F I D    +I   + L+    +  +LVV+ATD G+PP
Sbjct: 2092 APSQPTRGLFHI-DPAMGTITTTAILDREIWAETRLVVMATDRGSPP 2137



 Score = 48.9 bits (115), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 55/201 (27%), Positives = 87/201 (43%), Gaps = 30/201 (14%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWL-----SNDYGERFSISRQ----- 94
            F +  Y +   E+LP    +L +        R+   L     S + G  F + R      
Sbjct: 2362 FVQPHYHIVVAEDLPPGSTVLVLEATDADQSRLHASLDYTIISGNRGHAFQLERHLAEGG 2421

Query: 95   ------GDISLMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYP 145
                  G + L++ LD+E+   Y  TV A D      +T+  V I+V +VND  P F  P
Sbjct: 2422 SGPQALGYLVLLEPLDFESVTEYNLTVCAADRGTPPRSTTVLVVITVQDVNDNPPVFAQP 2481

Query: 146  QYELFLPHIPLADLTPGSVIGKVEAADGDKGD----RVTLSLRGPYEKMFSIND-SGHIS 200
             Y + +P     D   G+ + +V A+D D G     R T+S   P  ++F +++ SG + 
Sbjct: 2482 HYRVAVPE----DTPVGTELVRVVASDPDPGPHGLVRFTISSGDP-ARLFELDEGSGVLR 2536

Query: 201  IV-DLSALNTSTIQLVVVATD 220
            +   L     +  QLVV A D
Sbjct: 2537 LARQLDREAQAQHQLVVKAAD 2557



 Score = 47.4 bits (111), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 63/230 (27%), Positives = 96/230 (41%), Gaps = 17/230 (7%)

Query: 12   TLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNK 71
            TL V A  + +  R A   L VS    +     F +  Y V   EN P    +LT+    
Sbjct: 1494 TLTVVASDHGSPPRSATQLLTVSVVDINDEAPTFPQAAYHVRVSENRPPGTTVLTLRATD 1553

Query: 72   PRDLRVKYWLSND--YGERFSIS-RQGDISLMQCLDYETEDSYRFTVYATD---TLMTTS 125
            P DL V   ++     G+ FS+    G ++  Q LD E +     TVYA D     + + 
Sbjct: 1554 P-DLGVNGQVTYGGVSGDTFSLDPNSGVLTTRQVLDREEQQEINLTVYAQDGGSPPLLSH 1612

Query: 126  ATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS--- 182
             +V+++V + ND  P F      L +P     +      +  + A+D D G    ++   
Sbjct: 1613 VSVHVTVEDENDHAPAFGSSHLSLEVP-----EGQDPQTLTVLRASDPDAGPNGQINYQI 1667

Query: 183  LRGPYEKMFSIND-SGHISIV-DLSALNTSTIQLVVVATDTGNPPRQASV 230
            L G     F ++  SG +     L      + QL+VVA D G P R A+V
Sbjct: 1668 LNGDPSGAFILDAVSGTLGTARSLDRETEPSFQLLVVARDGGQPVRSATV 1717



 Score = 42.7 bits (99), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 59/222 (26%), Positives = 91/222 (40%), Gaps = 25/222 (11%)

Query: 89  FSI-SRQGDISLMQCLDYETEDSYRFTVYATDTLM---TTSATVNISVVNVNDWDPRFRY 144
           FSI +R G + L + LD+E    +   V A D        SA V + V + ND  P    
Sbjct: 308 FSIDARTGLLRLERPLDFEQRRVHELVVQARDGGAHPEVGSAFVTVHVRDSNDNQPTMTI 367

Query: 145 PQYELFL-----PHIPLADLTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSINDSG 197
               +FL     P +      PG ++ ++  +D D GD   V +SL G   K        
Sbjct: 368 ----IFLSEDGSPRV-SEGAQPGQLVARISVSDPDDGDYAHVNVSLEGGDGKFALTTQDS 422

Query: 198 HISIV----DLSALNTSTIQLVVVATDTGNPPRQASVPAIMHFPEAIVQQ-ASSKLNSGT 252
            I +V     L        +L V ATD G PP++A    ++H      Q   ++  +SG 
Sbjct: 423 VIYLVCVARRLDREERDAYELRVTATDAGTPPQRAEAAFVLHVTNVKEQPVTATDADSGP 482

Query: 253 SSTVLIILGVVLIVLG---FVIILLILYIHKNKH-TKNNGPP 290
              +  +LG  L  +G   F I  L   +  ++   ++ GPP
Sbjct: 483 FGLLSYMLGAGLSSIGPPPFQIDSLTGEVCTSRSLDRDQGPP 524



 Score = 42.4 bits (98), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 57/203 (28%), Positives = 85/203 (41%), Gaps = 23/203 (11%)

Query: 45   FSKNEYSVSALENLPVN---YVLLTVTTNKP---RDLRVKYWLSNDYGERFSIS-RQGDI 97
            FS++  +++  EN P     Y       + P    D+R +    +       +  R G +
Sbjct: 1313 FSRDPLTLALPENPPPGAAIYTFQATDADGPGPNSDVRYRLLRQSPPAPALHLDPRTGAL 1372

Query: 98   SLMQCLDYETEDSYRFTVYATDTLM------TTSATVNISVVNVNDWDPRFRYPQYELFL 151
            S  + LD ET  +    V ATD         +T  +  + V + ND  P F  P   L L
Sbjct: 1373 SAPRGLDRETTPALLLLVEATDQARNSSLRRSTRVSARVFVTDENDNTPIFVSPPTAL-L 1431

Query: 152  PHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR---GPYEKMFSIN-DSGHISIV-DLSA 206
            P     D   GSV   V A D D G+   LS +   G  +  F ++  SG +S+   L  
Sbjct: 1432 PE----DHPAGSVALYVVARDPDLGEAARLSYQLAGGSGDGHFHLHPSSGALSVTRPLDR 1487

Query: 207  LNTSTIQLVVVATDTGNPPRQAS 229
               +   L VVA+D G+PPR A+
Sbjct: 1488 EQRAEHTLTVVASDHGSPPRSAT 1510



 Score = 42.0 bits (97), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 42/126 (33%), Positives = 60/126 (47%), Gaps = 24/126 (19%)

Query: 123  TTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLA-DLTPGSVIGKVEAADGDKGDRVTL 181
            T  A V+I +++ ND+ P F  P Y     HI +A DL PGS +  +EA D D+  R+  
Sbjct: 2343 TAQAIVHIQLLDENDYTPSFVQPHY-----HIVVAEDLPPGSTVLVLEATDADQ-SRLHA 2396

Query: 182  SL--------RG---PYEKMFSINDSGHIS---IVDLSALNTSTI---QLVVVATDTGNP 224
            SL        RG     E+  +   SG  +   +V L  L+  ++    L V A D G P
Sbjct: 2397 SLDYTIISGNRGHAFQLERHLAEGGSGPQALGYLVLLEPLDFESVTEYNLTVCAADRGTP 2456

Query: 225  PRQASV 230
            PR  +V
Sbjct: 2457 PRSTTV 2462



 Score = 41.6 bits (96), Expect = 0.69,   Method: Compositional matrix adjust.
 Identities = 26/85 (30%), Positives = 44/85 (51%), Gaps = 7/85 (8%)

Query: 95   GDISLMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFL 151
            G +   + LD ETE S++  V A D    + + +  V ++V++ ND  P F  P Y + +
Sbjct: 1683 GTLGTARSLDRETEPSFQLLVVARDGGQPVRSATVLVTVTVLDANDHAPTFTAPSYAVEV 1742

Query: 152  PHIPLADLTPGSVIGKVEAADGDKG 176
            P     D   G+++ ++EA D D G
Sbjct: 1743 PE----DAPIGTLLLQLEARDPDDG 1763



 Score = 38.9 bits (89), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 32/103 (31%), Positives = 51/103 (49%), Gaps = 9/103 (8%)

Query: 126 ATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSL 183
           A V + + +VND  P F  P   ++LP     D  PG+ +  + AAD D G    VT +L
Sbjct: 751 ARVRVLLEDVNDNAPSFPSPADTVWLP----PDAGPGTPVYTLRAADPDTGTNGHVTFAL 806

Query: 184 RGPYEKMFSINDS-GHISIVDLSALNTSTIQLVVVATDTGNPP 225
               +  F+++ + GH+ +V    L     +L + A D G+PP
Sbjct: 807 VAGGKGTFAVDPATGHVHLV--RPLGGLAHELELEARDGGSPP 847


>gi|195036062|ref|XP_001989490.1| GH18776 [Drosophila grimshawi]
 gi|193893686|gb|EDV92552.1| GH18776 [Drosophila grimshawi]
          Length = 1972

 Score = 62.0 bits (149), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 53/165 (32%), Positives = 84/165 (50%), Gaps = 19/165 (11%)

Query: 82   SNDYGERFSISRQ-GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVND 137
            +NDY   F+I+   G I     LDYE     +F    +DT    +T +A + + ++N+ND
Sbjct: 1036 ANDY---FAINHTTGVIYTTARLDYEAVKEVKFMATVSDTGVPALTATADIVVDIINLND 1092

Query: 138  WDPRFRYPQYELFLPHIPLADLTP-GSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIN 194
             +P F   +Y     +  + + +P G+V GKVEA DGD G    +T +L G   K FSI+
Sbjct: 1093 NEPHFTQSEY-----YFNITENSPRGTVAGKVEAHDGDVGAFGELTYTLIGENNKYFSID 1147

Query: 195  D-SGHISIVDLSALNTSTIQ---LVVVATDTGNPPRQASVPAIMH 235
              +G++ + + S L+   ++   L VVA D      Q S  A +H
Sbjct: 1148 AYTGNVMVANASILDREQLKELTLSVVAQDKAPATVQKSATATIH 1192



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 60/207 (28%), Positives = 93/207 (44%), Gaps = 35/207 (16%)

Query: 30  TLIVSKAGTSLRELQ-----FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRV--KYWLS 82
           T   ++A  ++R++      F+K EY VS LEN PV   L    +    D+ V  K+ L 
Sbjct: 338 TSATARATVTIRDVNDSPPTFNKKEYEVSLLENTPVGTPLALDMSVSDADVGVNSKFALR 397

Query: 83  -NDYGERFSIS-------RQGDISLMQ-CLDYETEDSYRFTVYA----TDT--LMTTSAT 127
             D    F +         Q +I +    LDYE  +  +F V      TDT   ++++AT
Sbjct: 398 LEDVSGVFDVEPKLVTGYSQVNIRVANGTLDYENPNQRKFIVLVIAEETDTNPKLSSTAT 457

Query: 128 VNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAAD------GDKGDRVTL 181
           + +SV++ ND  P F    Y   +    L    PG  I  + A D      GD G R +L
Sbjct: 458 ITVSVLDANDNKPSFEQESYSATVSEAAL----PGQYITTITAKDVDSGSFGDAGIRYSL 513

Query: 182 SLRGPYEKMFSIND-SGHISIVDLSAL 207
           S  G   ++F +N+ +G I++ D   L
Sbjct: 514 S--GTGAELFHVNEQTGVITLGDCQRL 538



 Score = 41.2 bits (95), Expect = 0.83,   Method: Compositional matrix adjust.
 Identities = 41/134 (30%), Positives = 62/134 (46%), Gaps = 23/134 (17%)

Query: 102 CLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLAD 158
           CLDYETE +Y  +  ATD      T+  ++ ISV + ND  P    P Y         A 
Sbjct: 620 CLDYETETTYFLSYKATDDNGQGQTSVVSLRISVSDANDSPPVCESPLYR--------AS 671

Query: 159 LTPGSVIGK----VEAADGDKGDRVTLSLRGP--YEKMFSIND-SGHISI-----VDLSA 206
           +  G+++      V+A D D    ++  + G    E +F I+  SG ISI     +D++ 
Sbjct: 672 VDEGALVFDSPLVVKARDADTMSSISYRIIGSPQIESIFDIDKLSGQISIRPNASLDVTN 731

Query: 207 LNTSTIQLVVVATD 220
           L +  +  VV A D
Sbjct: 732 LKSEQLIFVVEAND 745



 Score = 40.8 bits (94), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 4/74 (5%)

Query: 73  RDLRVKYWLSNDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATV 128
           ++  ++Y +     + F I  R G++ + + LDY+  ++Y   V A D     +T +AT+
Sbjct: 799 KNAELRYRIQQGSFDDFGIDERTGEVFVSRKLDYDRRNTYHLQVQAADQGTPSLTGTATL 858

Query: 129 NISVVNVNDWDPRF 142
            ISV N ND DP F
Sbjct: 859 TISVQNSNDKDPYF 872


>gi|410974945|ref|XP_003993899.1| PREDICTED: protocadherin-15 isoform 3 [Felis catus]
          Length = 1923

 Score = 62.0 bits (149), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 65/241 (26%), Positives = 111/241 (46%), Gaps = 27/241 (11%)

Query: 6   DFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVL- 64
           DF Q   LV++A Q +     A A+L +     + +   F+   Y    LE+ PV   + 
Sbjct: 361 DFHQKFDLVIKAEQDNGHPLPAFASLHIEILDENNQSPYFTMPSYQGYILESAPVGATIS 420

Query: 65  --LTVTT-----------NKPRDLRVKYWLSNDYGERFSISRQG---DISLMQCLDYETE 108
             L +TT              +D  +  +L NDY   F++++ G    ++L+Q +D E +
Sbjct: 421 DSLNLTTPLRIVALDKDIEDTKDPELHLFL-NDYTSVFTVTQTGITRYLTLLQPVDREEQ 479

Query: 109 DSYRFTVYATDTLMTTSAT-VNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGK 167
            +Y F++ A D +  +    VNI V++ ND  P F    Y++++      D++PG  + +
Sbjct: 480 QTYTFSITAFDGVQESEPVIVNIRVMDANDNTPTFPEISYDVYV----YTDMSPGDSVIQ 535

Query: 168 VEAADGDKGD--RVTLSLRGPYEKMFSIND-SGHISIVDLSALNTS-TIQLVVVATDTGN 223
           + A D D+G    +T  +    +  F+IN  +G I+I    AL    T  L V A D   
Sbjct: 536 LTAVDADEGSNGEITYEILVGAQGDFTINRTTGLITIAQGVALTVGRTYALTVQAADNAP 595

Query: 224 P 224
           P
Sbjct: 596 P 596



 Score = 61.2 bits (147), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 60/195 (30%), Positives = 99/195 (50%), Gaps = 14/195 (7%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGER-FSISRQ-GDISLMQ 101
           +F +  YS+   E + +  VLL +         + Y + N   +R F++S   G ++L +
Sbjct: 620 RFPQLMYSLEISEAMRIGAVLLNLQATDREGDPITYAIENGDPQRVFNLSETTGILTLGK 679

Query: 102 CLDYETEDSYRFTVYATDTL--MTTSATVNISVVNVNDWDPRFRYPQYELFLP-HIPLAD 158
            LD E+ D Y   V A+D     T++ATVN+ V +VND  P F     + +LP ++ + +
Sbjct: 680 ALDRESTDRYILIVTASDGRPDGTSTATVNVLVTDVNDNAPVF-----DPYLPRNLSVVE 734

Query: 159 LTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDSGHI-SIVDLSALNTSTIQLV 215
               + +G+V A D D G   +V  SL G +  +F I  +G I + V L+       +LV
Sbjct: 735 EEANAFVGQVRATDPDAGINGQVHYSL-GNFNNLFRITSNGSIYTAVKLNREVRDYYELV 793

Query: 216 VVATDTGNPPRQASV 230
           VVATD    PR +++
Sbjct: 794 VVATDGAVHPRHSTL 808



 Score = 51.2 bits (121), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 71/233 (30%), Positives = 103/233 (44%), Gaps = 26/233 (11%)

Query: 13   LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKP 72
            LVV A       R++  TL +           F+ + Y+V   ENLP     L +   K 
Sbjct: 792  LVVVATDGAVHPRHSTLTLAIKVLDIDDNSPVFTNSTYTVIVEENLPAGTTFLQIEA-KD 850

Query: 73   RDL--RVKYWLSNDYGERFSISR--QGDISLMQCLDYET----EDSYRFTVYATD---TL 121
             DL   V Y + +   + F       G++SL++ LDYE+    E S  F V A D   T+
Sbjct: 851  VDLGANVSYRIRSPEVKHFFALHPFTGELSLLRSLDYESFPDQEASITFLVEAFDIYGTM 910

Query: 122  MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDK----GD 177
                ATV + V ++ND+ P F    Y+  +      D   G+ I  V A D D       
Sbjct: 911  PPGIATVTVIVKDMNDYPPVFSKRIYKGMV----APDAVKGTPITTVYAEDADPPGLPAS 966

Query: 178  RVTL---SLRGPY-EKMFSIN-DSGH-ISIVDLSALNTSTIQLVVVATDTGNP 224
            RV      ++ PY   +F +  DSG  I+ V+L+   T+  +LVVVA D G P
Sbjct: 967  RVRYRVDDVQFPYPASIFDVEEDSGRVITRVNLNEEPTTIFKLVVVAFDDGEP 1019



 Score = 43.9 bits (102), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 35/119 (29%), Positives = 55/119 (46%), Gaps = 8/119 (6%)

Query: 76  RVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDTLMT---TSATVNISV 132
           +V Y L N +   F I+  G I     L+ E  D Y   V ATD  +    ++ T+ I V
Sbjct: 756 QVHYSLGN-FNNLFRITSNGSIYTAVKLNREVRDYYELVVVATDGAVHPRHSTLTLAIKV 814

Query: 133 VNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMF 191
           ++++D  P F    Y + +      +L  G+   ++EA D D G  V+  +R P  K F
Sbjct: 815 LDIDDNSPVFTNSTYTVIVEE----NLPAGTTFLQIEAKDVDLGANVSYRIRSPEVKHF 869


>gi|242024529|ref|XP_002432680.1| conserved hypothetical protein [Pediculus humanus corporis]
 gi|212518150|gb|EEB19942.1| conserved hypothetical protein [Pediculus humanus corporis]
          Length = 1860

 Score = 61.6 bits (148), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 48/149 (32%), Positives = 80/149 (53%), Gaps = 17/149 (11%)

Query: 95   GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFL 151
            G + L + +DYE E    FT++A D+     ++SA V ++V+NVND DP F   +Y+  +
Sbjct: 953  GVVRLKKEVDYEREKKLNFTIWAHDSGVPQFSSSAEVIVNVINVNDNDPVFSQTEYKASV 1012

Query: 152  PHIPLADLTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSIN-DSGHISIVDLSALN 208
            P         G++I KV A D D     +VT SL G +   F++  ++G + + + + L+
Sbjct: 1013 PENSFI----GTLITKVTATDADAESYGQVTYSLVGEHSNDFTLGLENGELRVANPAILD 1068

Query: 209  TSTIQLV---VVATDTGNPP---RQASVP 231
               ++ +   +VA+D G PP   R  SVP
Sbjct: 1069 REDVKKITVEIVASD-GAPPDTRRAVSVP 1096



 Score = 47.8 bits (112), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 44/162 (27%), Positives = 77/162 (47%), Gaps = 24/162 (14%)

Query: 79  YWLSNDYGERFSISRQGDISLM---------QCLDYETEDSYRFTVYATDTL---MTTSA 126
           Y L  +  E+FS++ +  + ++         QCLDYET++ Y  T  ATD      +   
Sbjct: 492 YQLEGNGSEKFSVNSKTGVVVVAKCENPGKPQCLDYETKNIYDLTYKATDDEGKGQSNQV 551

Query: 127 TVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSL-RG 185
           ++ IS+ + ND  P F   QY+  +         P     K+ A D D+  ++   +  G
Sbjct: 552 SLRISLKDDNDNPPVFERSQYQTVIDEGSNKFQPP----FKITAHDKDETSQIEYYIVTG 607

Query: 186 PYEKMFSIN-DSGHISIVD------LSALNTSTIQLVVVATD 220
               +FS++  SG I++ D      ++ ++ + I+LVV ATD
Sbjct: 608 NVNNLFSLDPHSGEITVTDKKNGLNMTGVSNNVIELVVQATD 649



 Score = 41.2 bits (95), Expect = 0.95,   Method: Compositional matrix adjust.
 Identities = 46/180 (25%), Positives = 80/180 (44%), Gaps = 16/180 (8%)

Query: 29   ATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDL---RVKYWLSNDY 85
            A +IV+    +  +  FS+ EY  S  EN  +  ++  VT          +V Y L  ++
Sbjct: 987  AEVIVNVINVNDNDPVFSQTEYKASVPENSFIGTLITKVTATDADAESYGQVTYSLVGEH 1046

Query: 86   GERFSIS-RQGDISLMQCLDYETEDSYRFTVYAT-------DTLMTTSATVNISVVNVND 137
               F++    G++ +      + ED  + TV          DT    S  V+I++++VND
Sbjct: 1047 SNDFTLGLENGELRVANPAILDREDVKKITVEIVASDGAPPDTRRAVSVPVHITILDVND 1106

Query: 138  WDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN 194
              P F +  Y+  +  +   DL P + I +V A D D G   T+S   + G  + +F I+
Sbjct: 1107 NAPSFVHKNYKATI--VENIDLNPPAKIVQVHAMDPDDGSYGTVSYSIVGGNLDDVFRID 1164


>gi|194226506|ref|XP_001916261.1| PREDICTED: protocadherin Fat 1 [Equus caballus]
          Length = 4588

 Score = 61.6 bits (148), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 63/217 (29%), Positives = 105/217 (48%), Gaps = 18/217 (8%)

Query: 29   ATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTV-TTNKPRDL--RVKYWLSNDY 85
            A + V+  G +L    F +NEY V   EN PV+ +++ V  T+    +   + Y + ND+
Sbjct: 2476 AQVHVTVIGGNLHSPVFLQNEYEVELAENAPVHTLVIEVKATDGDSGIYGDITYHIVNDF 2535

Query: 86   G-ERFSISRQGDISLMQCLDYET--EDSYRFTVYATDTLMTTS-ATVNISVVNVNDWDPR 141
              +RF  + +G I  ++ LD ET  E      + A D     +  T+N+ + + ND  P+
Sbjct: 2536 AKDRFYTNERGQIFTLEKLDRETPAEKVISVRLMAKDAGGKVAFCTINVILTDDNDNAPQ 2595

Query: 142  FRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDR--VTLSLRGPYEKM---FSIND- 195
            FR  +YE+ +     +    G+ + KV A+D D+G    VT ++    E +     IN  
Sbjct: 2596 FRATKYEVNIG----SSAPKGTSVIKVLASDADEGSNADVTYAIEADSESVKENLEINKL 2651

Query: 196  SGHISIVD-LSALNTSTIQLVVVATDTGNPPRQASVP 231
            SG I+  + L  L        V A D G+PP+++ VP
Sbjct: 2652 SGIITTKESLIGLENEFFTFFVRAVDNGSPPKESVVP 2688



 Score = 61.2 bits (147), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 47/201 (23%), Positives = 93/201 (46%), Gaps = 30/201 (14%)

Query: 7    FLQPITLVVRAIQYDNQDRYALATL-------------------IVSKAGTSLRELQFSK 47
            F++P T VV + ++     Y + ++                    +SK   SL  + F +
Sbjct: 1301 FIEPKTGVVSSKKFSGAGEYDILSIKAVDNGRPQKSSTTRLHIEWISKPTPSLEPISFEE 1360

Query: 48   NEYSVSALENLPVNYVLLTVTTNKPRDLRVKYW---LSNDYGERFSISR-QGDISLMQCL 103
            + ++ + +E+ PV +++  ++   P    +  W   +  +Y   F + +  G I + + L
Sbjct: 1361 SFFTFTVMESDPVAHMIGVLSVEPPG---IPLWFDIIGGNYESHFDVDKGTGTIIVAKPL 1417

Query: 104  DYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGS 163
            D E + +Y  TV ATD   T    V I V++ ND  P+F   +YE+ +P     D  P +
Sbjct: 1418 DAEQKSNYNLTVEATDGTTTILTQVFIKVIDTNDHRPQFSTSKYEVVIPE----DTVPET 1473

Query: 164  VIGKVEAADGDKGDRVTLSLR 184
             I ++ A D D+ +++  +L+
Sbjct: 1474 EILQISALDKDEKNKLIYTLQ 1494



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 58/201 (28%), Positives = 99/201 (49%), Gaps = 23/201 (11%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSN-DYGERFSIS-RQGDISLMQC 102
            F K  YS    EN+ ++  ++ +  N P  L+V Y +++ D   +F+I+   G I+++  
Sbjct: 2182 FEKPFYSAEIPENIQIHSPVVHIQANSPEGLKVFYSITDGDPFSQFTINFNTGVINVIAP 2241

Query: 103  LDYETEDSYRFTVYATDTLMTTSATVNISVV--NVNDWDPRFRYPQYELFLPHIPLADLT 160
            LD+E+  +Y+ ++ ATD+L    A V + ++  ++ND  P F    Y         A L+
Sbjct: 2242 LDFESHPAYKLSIRATDSLTGAHAEVFVDIIVEDINDNPPVFVQQSY--------AATLS 2293

Query: 161  PGSVIG----KVEAADGDK--GDRVTLSLRGPYEK---MFSINDS-GHISIVD-LSALNT 209
              SVIG    +V+A D D      ++  + G + K    F I+ S G IS+V  L     
Sbjct: 2294 EASVIGTSVVQVKATDSDSEPNRGISYHMFGNHSKSHDHFHIDSSTGLISLVRTLDYEQF 2353

Query: 210  STIQLVVVATDTGNPPRQASV 230
               ++ V A D+G PP  + V
Sbjct: 2354 QQHKIFVRAVDSGMPPLSSDV 2374



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 44/145 (30%), Positives = 70/145 (48%), Gaps = 8/145 (5%)

Query: 90   SISRQGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYEL 149
            +I  +  + + + LD E  D+Y  T+ ATD   ++ A V + V++ ND  P      Y  
Sbjct: 2971 NIQSEWKVYVKKPLDREKRDNYLLTITATDGTFSSKAIVEVKVLDANDNSPICEKTLYSD 3030

Query: 150  FLPHIPLADLTPGSVIGKVEAADGD--KGDRVTLSLRGPYEKMFSIN-DSGHI-SIVDLS 205
             +P     D  PG +I +V A D D      +T +L GP  + F +N D+G + ++V L 
Sbjct: 3031 TIPE----DAFPGKLILQVSATDADIRSNAEITYTLFGPGAEKFKLNPDTGELKTLVPLD 3086

Query: 206  ALNTSTIQLVVVATDTGNPPRQASV 230
                +   L+V ATD G    QA +
Sbjct: 3087 REEQAVYNLLVKATDGGGRFCQAHI 3111



 Score = 54.7 bits (130), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 57/197 (28%), Positives = 96/197 (48%), Gaps = 21/197 (10%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLS------NDYGERFSI-SRQGDI 97
            F   EY  +  E++ +   +L V     RD+     ++      N++G +FSI S+ G I
Sbjct: 3230 FEYREYGATVSEDILIGTEVLQVYAAS-RDIEANAEITYSIISGNEHG-KFSIDSKTGAI 3287

Query: 98   SLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHI 154
             +++ LDYE+   Y  TV ATD     ++  ATVN++V ++ND  P F    Y   +   
Sbjct: 3288 FIIENLDYESSHEYYLTVEATDGGTPSLSDVATVNVNVTDINDNTPVFSQDTYTAVISED 3347

Query: 155  PLADLTPGSVIGKVEAADGDKGDRVTLS-LRGPYEKMFSINDS-GHISIVDLSALNTSTI 212
             + + +  +V+   + ADG     +  S + G     F+I+ + G + +  L  L+  TI
Sbjct: 3348 AVLEQSVITVMA--DDADGPSNSHIHYSIIDGNQGGPFTIDPARGEVKVTKL--LDRETI 3403

Query: 213  Q---LVVVATDTGNPPR 226
                L V A+D G+PPR
Sbjct: 3404 SGYTLTVQASDNGSPPR 3420



 Score = 48.1 bits (113), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 56/244 (22%), Positives = 106/244 (43%), Gaps = 40/244 (16%)

Query: 4    EDDFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYV 63
            E++F    T  VRA+   +  + ++  + V      ++  +F++  Y+ +  E++P+   
Sbjct: 2665 ENEFF---TFFVRAVDNGSPPKESVVPVYVKILPPEMQLPKFTEPFYTYTVPEDMPIGTE 2721

Query: 64   LLTVTTNKPRDLRVKYWLSN----DYGERFSISRQ-GDISLMQCLDYETEDSYRFTVYAT 118
            +  +       +       N    +  E F I RQ G + L + LD+ET   Y+F++ A 
Sbjct: 2722 IDLIRAEHRGTVLYSLIKGNTPESNRDEFFVIDRQSGRLKLEKSLDHETTKWYQFSILAR 2781

Query: 119  ----DTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGD 174
                D+ +  S  V+I V + ND  P      YE F+    + +L  GS + ++ A+D D
Sbjct: 2782 CTHDDSEVVASVDVSIQVKDANDNSPVVESNPYEAFI----VENLPGGSRVIQIRASDLD 2837

Query: 175  KGDRVTLSLRGPYEKMFSINDSGHISIVDLSALNTST----------------IQLVVVA 218
             G    +        M+S++ S  + +++  A+N  T                 Q+ VVA
Sbjct: 2838 SGTNGQV--------MYSLDQSQSVEVLESFAINMETGWITTLKELDHEKRDNYQIKVVA 2889

Query: 219  TDTG 222
            +D G
Sbjct: 2890 SDHG 2893



 Score = 45.4 bits (106), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 55/195 (28%), Positives = 88/195 (45%), Gaps = 20/195 (10%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTTNKPRDL----RVKYWLSNDYGERFSI-SRQGDIS 98
            +F +  Y V   E+  +N  ++ V     +DL    RV Y +  D  ++FSI S  G + 
Sbjct: 821  EFLQERYFVEVSEDKEINSEIIQVEATD-KDLGPNGRVTYSILTD-TDKFSIDSMTGVVK 878

Query: 99   LMQCLDYETEDSYRFTVYATDTL-----MTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
            ++  LD E +  +   + A D       + ++  + +S+ +VND  P+F  P Y + +  
Sbjct: 879  IVDPLDRELQHVHYLKIEARDQASEEPQLLSTVLLKVSLEDVNDNPPKFIPPNYRVKV-- 936

Query: 154  IPLADLTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSIND-SGHISIV-DLSALNT 209
                DL  G++I  +EA D D G   +V  SL    E  F ++  SG + IV  L     
Sbjct: 937  --REDLPEGTIIMWLEAYDPDLGQSSQVRYSLLDHGEGNFDVDKLSGAVRIVQQLDFEKK 994

Query: 210  STIQLVVVATDTGNP 224
                L V A D G P
Sbjct: 995  QVYNLTVRAKDKGKP 1009



 Score = 45.4 bits (106), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 63/225 (28%), Positives = 105/225 (46%), Gaps = 19/225 (8%)

Query: 13   LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKP 72
            L+V+A   D   R+  A ++++    +    +FS + Y+++  EN     +L  V     
Sbjct: 3095 LLVKAT--DGGGRFCQAHIVLTLEDVNDNAPEFSADPYTITVFENTEPGTLLTRVQATDA 3152

Query: 73   R---DLRVKYWLSNDYGERFSISR-QGDISLMQCLDYETEDSYRFTVYATD----TLMTT 124
                + ++ Y L N    +FSI+   G I L + LD E +  Y  T+ A D      +T 
Sbjct: 3153 DAGLNRKISYSLINSADGQFSINELSGIIQLEKPLDREVQAVYTLTLKAVDHGLPRRLTG 3212

Query: 125  SATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAA--DGDKGDRVTLS 182
              TV +SV+++ND  P F Y +Y   +      D+  G+ + +V AA  D +    +T S
Sbjct: 3213 VGTVVVSVLDINDNPPVFEYREYGATVSE----DILIGTEVLQVYAASRDIEANAEITYS 3268

Query: 183  -LRGPYEKMFSIND-SGHISIVD-LSALNTSTIQLVVVATDTGNP 224
             + G     FSI+  +G I I++ L   ++    L V ATD G P
Sbjct: 3269 IISGNEHGKFSIDSKTGAIFIIENLDYESSHEYYLTVEATDGGTP 3313



 Score = 41.6 bits (96), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 43/157 (27%), Positives = 72/157 (45%), Gaps = 10/157 (6%)

Query: 76   RVKYWLSNDYGERFSIS-RQGDISLMQCLDYETEDSYRFTVYATDTL-MTTSATVNISVV 133
             + Y L     E+F ++   G++  +  LD E +  Y   V ATD       A + +++ 
Sbjct: 3057 EITYTLFGPGAEKFKLNPDTGELKTLVPLDREEQAVYNLLVKATDGGGRFCQAHIVLTLE 3116

Query: 134  NVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMF 191
            +VND  P F    Y + +      +  PG+++ +V+A D D G   +++ SL    +  F
Sbjct: 3117 DVNDNAPEFSADPYTITV----FENTEPGTLLTRVQATDADAGLNRKISYSLINSADGQF 3172

Query: 192  SIND-SGHISIVD-LSALNTSTIQLVVVATDTGNPPR 226
            SIN+ SG I +   L     +   L + A D G P R
Sbjct: 3173 SINELSGIIQLEKPLDREVQAVYTLTLKAVDHGLPRR 3209



 Score = 40.8 bits (94), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 42/161 (26%), Positives = 71/161 (44%), Gaps = 12/161 (7%)

Query: 45   FSKNEYSVSALENLPVNY-VLLTVTTNKPRDLRVKYWL----SNDYGERFSISRQGDISL 99
            FSK  YS+   EN PV + VL  V T+K        +     S +    F +++QG +  
Sbjct: 3440 FSKRIYSIIIQENKPVGFSVLQLVVTDKDSSHNGPPFFFTIVSGNEDGAFDVNQQGVLLT 3499

Query: 100  MQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
               +    +D Y   V   D     +++   ++I V+  + + P       E+F+     
Sbjct: 3500 STAIRRNVKDHYLLHVKVADNGKPQLSSLTYIDIRVIEESIYPPAIL--PLEIFI--TAF 3555

Query: 157  ADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSG 197
             +   G VIGK+ A D D  D +T SL    + +FS++ +G
Sbjct: 3556 GEEYSGGVIGKIHATDQDVYDTLTYSLDPQMDNLFSVSSTG 3596



 Score = 40.0 bits (92), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 57/215 (26%), Positives = 92/215 (42%), Gaps = 19/215 (8%)

Query: 24  DRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLR---VKYW 80
           DR A   ++V     +    +F++  Y  S  EN+PV   +++V+   P +     V Y 
Sbjct: 442 DRKASTRVLVKVVSANTNPPEFTETAYKASFDENVPVGTTVMSVSAVDPDEGENGYVTYS 501

Query: 81  LSNDYGERFSISR-QGDISLMQCLDYE-TEDSYRFTVYATDTLMTTSATVNI----SVVN 134
           ++N     F I+   G +S  + LDYE     Y   + A+D  +     V +    ++ N
Sbjct: 502 IANLNHVPFVINHFTGAVSTSENLDYELMPRVYTLRIRASDWGLPYRREVEVLATLTLNN 561

Query: 135 VNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYE-KMFSI 193
           +ND  P F     E  +P     DL  G  I  V A D D+   V   +    E  +FS+
Sbjct: 562 LNDNTPLFEKINCEGTIPR----DLGVGEQITTVSAIDADELQLVRYQIEAGNELDLFSL 617

Query: 194 N-DSGHIS----IVDLSALNTSTIQLVVVATDTGN 223
           + +SG +S    ++D      S   L + ATD  N
Sbjct: 618 HPNSGVLSLKQPLMDGLGAKVSFHSLRITATDGEN 652



 Score = 39.7 bits (91), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 51/191 (26%), Positives = 86/191 (45%), Gaps = 30/191 (15%)

Query: 56   ENLPVNYVLLTVTTNKP---RDLRVKYWLSNDYG-ERFSISRQ-GDISLMQCLDYETEDS 110
            E++P+   ++ V+ +     RD  ++Y + +  G   F I  + G I     LD E+   
Sbjct: 1045 EDVPIGSSVMAVSAHDEDTGRDGEIRYSIRDGSGVGVFKIDEETGVIETSDRLDRESTSH 1104

Query: 111  YRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSV-IG 166
            Y  TVYATD     +++   V I V +VND  P+   P   ++ P +   + +P  V + 
Sbjct: 1105 YWLTVYATDQGVVPLSSFIEVYIEVEDVNDNAPQTSEP---VYYPEV--MENSPKDVSVV 1159

Query: 167  KVEAADGDKGDRVTLSLRGPYEKMFSINDSGHISIVDLSALNTSTIQ-----------LV 215
            +++A D D      L+      K+ S N  G  +I   + L T+T +           L 
Sbjct: 1160 QIQAFDPDSSSNDKLTY-----KITSGNPQGFFAIHPKTGLITTTSRKLDREQQDEHILE 1214

Query: 216  VVATDTGNPPR 226
            V  TD G+PP+
Sbjct: 1215 VTVTDNGSPPK 1225



 Score = 38.1 bits (87), Expect = 7.9,   Method: Compositional matrix adjust.
 Identities = 41/134 (30%), Positives = 59/134 (44%), Gaps = 13/134 (9%)

Query: 87   ERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDTLM---TTSATVNISVVNVNDWDPRF 142
            + F I S  G ISL++ LDYE    ++  V A D+ M   ++   V + V ++ND  P F
Sbjct: 2331 DHFHIDSSTGLISLVRTLDYEQFQQHKIFVRAVDSGMPPLSSDVIVTVDVTDLNDNPPLF 2390

Query: 143  RYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSINDSGHI 199
                YE  +        T G  +  V+A D D  D   L    L G   K F I+     
Sbjct: 2391 DQQIYEAKISE----HATHGHFVTCVKAYDADSSDIDKLEYSILSGNDHKNFVID--SET 2444

Query: 200  SIVDLSALNTSTIQ 213
             I+ LS L   T++
Sbjct: 2445 GIITLSNLRRHTLK 2458


>gi|195389138|ref|XP_002053234.1| GJ23774 [Drosophila virilis]
 gi|194151320|gb|EDW66754.1| GJ23774 [Drosophila virilis]
          Length = 1731

 Score = 61.6 bits (148), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 64/210 (30%), Positives = 101/210 (48%), Gaps = 18/210 (8%)

Query: 37  GTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWL--SNDYGERFSISRQ 94
           G + +  +F+   Y V   E   +N  +  V  + P +  V Y +   ND   +FS+ +Q
Sbjct: 601 GPNTKPPRFTHMLYEVQVSEGAEINSTVTVVHADDPENDPVVYSIISGNDL-RQFSVGQQ 659

Query: 95  -GDISLMQCLDYETEDSYRFTVYATDTL-MTTSATVNISVVNVNDWDPRFRYPQYELFLP 152
            G I +++ LD E+   Y+  V A D   +++SATVNI V ++ND +P F     E+  P
Sbjct: 660 SGVIMVIRKLDRESLTRYQLVVKAEDNGGLSSSATVNIKVTDINDKNPEFD----EITQP 715

Query: 153 HIPLADLT-PGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSIND-SGHISI---VDLSAL 207
           ++   D     + +G V A D D+G    ++   P +  FSIN+ SG I     +D   L
Sbjct: 716 YVFHVDEGLQDAFVGIVHATDADEGVNAEITYSIPTDIPFSINNKSGEIRTSDKLDFERL 775

Query: 208 NTSTIQLVVVATDTGNPPR--QASVPAIMH 235
           N    + VV A D     R   ASV  ++H
Sbjct: 776 N--EYKFVVTAKDGAPDARLGTASVTVVVH 803



 Score = 39.7 bits (91), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 53/225 (23%), Positives = 96/225 (42%), Gaps = 51/225 (22%)

Query: 38  TSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGERFSIS--RQG 95
           T  R +Q    +  V+ L    V Y ++    N   D ++    S D    F+IS   QG
Sbjct: 164 TVYRNIQALDKDAGVNGL----VEYFIVKGNINMTEDDKLT---SADGFGTFAISFPHQG 216

Query: 96  DISLMQCLDYETEDSYRFTVYATDTL------MTTSATVNISVVNVNDWDPRFRY----- 144
            +++ + LDYE    +  T+ A+D        ++++ T+ +++ + +D DP F Y     
Sbjct: 217 QVTVAKTLDYEKIQRFYLTIVASDRARNVSERLSSTTTLTVNIADSDDMDPSFIYRGCVL 276

Query: 145 -------PQYELFLPHIPLADLTPGSVIG-------KVEAADGDK-GDRVTLSLR----G 185
                  P+Y   +P         GSV G       +++A D D    R+  S      G
Sbjct: 277 LDGACINPEYTASVP--------AGSVQGVLNVLPERIQAVDLDTISSRIRYSFASGIPG 328

Query: 186 PYEKMFSINDSGHISIVDLSALNTSTIQ---LVVVATDTGNPPRQ 227
            Y   F I++   + +  + A++TST +   ++V A +    PR+
Sbjct: 329 NYADYFEIDEETGV-LKQIKAIDTSTAKRYDIIVRAEEISPAPRR 372


>gi|345311026|ref|XP_001519720.2| PREDICTED: protocadherin Fat 1-like, partial [Ornithorhynchus
            anatinus]
          Length = 2269

 Score = 61.6 bits (148), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 64/230 (27%), Positives = 107/230 (46%), Gaps = 16/230 (6%)

Query: 13   LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKP 72
            LVV +   + + R + AT+ V+ A  +    +FS   Y  +  E  P   V+  ++++  
Sbjct: 1359 LVVASDCGERERRSSTATVEVTVADENDNPPRFSAEVYKGTVSEADPSGGVVAVLSSSDA 1418

Query: 73   ----RDLRVKYWLSN-DYGERFSISRQGD---ISLMQCLDYETEDSYRFTVYATDTLMTT 124
                 + RV Y+++  D   +F++ +  D   + + + LD E +DSY   V ATD   T 
Sbjct: 1419 DADEMNRRVTYYITGGDPQGQFAVEQAQDEWRVFVQRALDREEKDSYLLNVTATDGTFTA 1478

Query: 125  SATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGD--KGDRVTLS 182
             A V + V++ ND  P      Y   +P     D  PG +I +V A D D      +T +
Sbjct: 1479 GAVVEVKVLDANDNSPVCDKTLYTETIPE----DSLPGRLITQVSATDADIRTNAEITYT 1534

Query: 183  LRGPYEKMFSIN-DSGHISIVD-LSALNTSTIQLVVVATDTGNPPRQASV 230
            L GP  + F+++ ++G +     L     +T  L+V ATD G     ASV
Sbjct: 1535 LSGPGAENFNLHPETGELKTFGPLDREQQATYNLLVTATDGGGRSCCASV 1584



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 55/195 (28%), Positives = 84/195 (43%), Gaps = 13/195 (6%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWL--SNDYGERFSISRQGDISLMQC 102
           F ++ Y     E+ P    ++ +  + P  LRV Y +   +  G+  +    G + +   
Sbjct: 657 FEQSFYRAEVPEDAPPRSPVVHLRASAPEGLRVSYRIVDGDPLGQFDADFHTGTLHVAAP 716

Query: 103 LDYETEDSYRFTVYATDTLMTTSATVNISVV--NVNDWDPRFRYPQYELFLPHIPLADLT 160
           LD+E   +Y+ TV ATD+L    A V + +V  +VND  PRF    Y   L         
Sbjct: 717 LDFEAHPAYKLTVRATDSLTGAHADVFVDIVVRDVNDNPPRFNQMAYASTLSEAAAV--- 773

Query: 161 PGSVIGKVEAADGD----KGDRVTLSLRGPYEKMFSINDSGHISIVD-LSALNTSTIQLV 215
            G+++  V AAD D    +G    L      +      DSG I++V  L        QL+
Sbjct: 774 -GTLVVWVRAADADLESGRGLTYHLDAGLDDDLFLLDQDSGAITLVGPLDYEQAREHQLL 832

Query: 216 VVATDTGNPPRQASV 230
           + A D G PP  A V
Sbjct: 833 IRAVDGGRPPLSAEV 847



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 61/203 (30%), Positives = 86/203 (42%), Gaps = 33/203 (16%)

Query: 12   TLVVRAIQYDNQDRY-ALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTN 70
            TL VRA+      +  A ATL+VS    +    +F   EY  +  E++PV   +L V   
Sbjct: 1669 TLTVRAVDRGPAGQLSATATLVVSVLDINDNPPEFEYREYGGAVAEDVPVGTEVLRVYAA 1728

Query: 71   KPRDLRVKYWLS------NDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDT--- 120
              RD+     ++      N++G RF + +  G + +   LDYE    Y  TV ATD    
Sbjct: 1729 S-RDVEANAEITYAIVGGNEHG-RFGVDAATGAVFVSASLDYEQARDYCLTVEATDGGSP 1786

Query: 121  LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVT 180
             ++  ATVNI+V ++ND  P F    Y   +      D  P   I  V A D D      
Sbjct: 1787 PLSDVATVNINVTDINDHAPVFSQDSYTAVVSE----DAAPDQSILTVSADDAD------ 1836

Query: 181  LSLRGPYEKMFSINDSGHISIVD 203
                GP   +       H SIVD
Sbjct: 1837 ----GPSNSLI------HYSIVD 1849



 Score = 48.1 bits (113), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 59/211 (27%), Positives = 102/211 (48%), Gaps = 27/211 (12%)

Query: 40   LRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLS-------NDYGERFSIS 92
            +R   F++  YS +  E+LP+   + T+  +      + Y L        ND  E F++ 
Sbjct: 1169 VRPPHFAEPFYSFAVPEDLPLGSEIGTLRADL-GGAALDYSLDRGPAGQDNDPSEVFAVD 1227

Query: 93   RQ-GDISLMQCLDYETEDSYRFTVYATDTL----MTTSATVNISVVNVNDWDPRFRYPQY 147
            R+ G ++L++ LD+E    Y+ TV A        +T S  V+I V +VND  P    P+ 
Sbjct: 1228 RRSGRLTLLRSLDHEASRWYQITVRARGRQRGHEVTASVDVSIRVGDVNDNSP---MPEA 1284

Query: 148  ELFLPHIPLADLTP-GSVIGKVEAADGDKG--DRVTLSL-----RGPYEKMFSINDSGHI 199
            + +   +  A+  P GS + +V A+D D G   +V  +L     R   E      DSG +
Sbjct: 1285 DPYAASV--AENRPVGSPVVQVRASDPDLGPNGQVQYALDPAQDRAVLEAFAVHPDSGWL 1342

Query: 200  SIV-DLSALNTSTIQLVVVATDTGNPPRQAS 229
            + + +L     +T +++VVA+D G   R++S
Sbjct: 1343 TTLRELDREERATFRVLVVASDCGERERRSS 1373



 Score = 44.7 bits (104), Expect = 0.072,   Method: Compositional matrix adjust.
 Identities = 60/218 (27%), Positives = 97/218 (44%), Gaps = 28/218 (12%)

Query: 33   VSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTV-TTNK---PRDLRVKYWLSNDYGE- 87
            V+  G +     F+++E      E+ P   ++ T   T+K   P  L + Y + N +   
Sbjct: 951  VAVTGANQHAPTFAQSELEAELAESAPAGTLVATAEATDKDVGPYGL-LAYSIVNAFAAA 1009

Query: 88   RFSISRQGDISLMQCLDYE--TEDSYRFTVYATDTLMTTS-ATVNISVVNVNDWDPRFRY 144
            RF +  +G +  +Q LD E  +E      + A D     +  TV++ + + ND  PRFR 
Sbjct: 1010 RFRVDARGRLFTIQELDRENPSERVVPVRLMARDGGGRAAFCTVSVILTDTNDHAPRFRA 1069

Query: 145  PQYELFLPHIPLADLTPGSVIGK----VEAADGDKGDR--VTLSLRGPYEK---MFSIND 195
              YE        AD+  G+  GK    V A D D+G    VT +L     +   + +I+ 
Sbjct: 1070 AIYE--------ADVDAGTPRGKPVLTVLATDADEGSNADVTYALEADASRARELLAIDP 1121

Query: 196  S-GHISIVD-LSALNTSTIQLVVVATDTGNPPRQASVP 231
              G IS+ + L  L+   +   V A D G+PP   +VP
Sbjct: 1122 RLGIISVRETLVGLDGQVLSFSVQARDGGSPPLATAVP 1159



 Score = 40.4 bits (93), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 42/160 (26%), Positives = 77/160 (48%), Gaps = 14/160 (8%)

Query: 76   RVKYWLSNDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDT----LMTTSATVNI 130
            +++Y L       FS+ +  G + L + LD E +  +  TV A D      ++ +AT+ +
Sbjct: 1632 KIRYTLVPPADSHFSVDADSGIVWLERSLDREVQAVHTLTVRAVDRGPAGQLSATATLVV 1691

Query: 131  SVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAA--DGDKGDRVTLSLRGPYE 188
            SV+++ND  P F Y +Y   +      D+  G+ + +V AA  D +    +T ++ G  E
Sbjct: 1692 SVLDINDNPPEFEYREYGGAVAE----DVPVGTEVLRVYAASRDVEANAEITYAIVGGNE 1747

Query: 189  KMFSINDSGHISIVDLSALNTSTIQ---LVVVATDTGNPP 225
                  D+   ++   ++L+    +   L V ATD G+PP
Sbjct: 1748 HGRFGVDAATGAVFVSASLDYEQARDYCLTVEATDGGSPP 1787



 Score = 37.7 bits (86), Expect = 8.4,   Method: Compositional matrix adjust.
 Identities = 28/104 (26%), Positives = 50/104 (48%), Gaps = 8/104 (7%)

Query: 95  GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFL 151
           G I+L+  LDYE    ++  + A D     ++    V ++V N+ND  P F  P YE  +
Sbjct: 813 GAITLVGPLDYEQAREHQLLIRAVDGGRPPLSAEVLVTVTVSNLNDHLPLFDQPLYEATV 872

Query: 152 PHIPLADLTPGSVIGKVEAADGDKGDRVTLSL-RGPYEKMFSIN 194
             +      PG ++ +V A D D    +  ++  G   ++FS++
Sbjct: 873 GGL----AAPGHLVTRVAAIDADGPGLLEYAIVAGDRGRLFSMD 912


>gi|74212779|dbj|BAE33356.1| unnamed protein product [Mus musculus]
          Length = 827

 Score = 61.6 bits (148), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 79/294 (26%), Positives = 134/294 (45%), Gaps = 43/294 (14%)

Query: 14  VVRAIQYDNQDRYALATLIVSKAGTSLRELQ-FSKNEYSVSALENLPVNYVLLTVTTNKP 72
           +V+ I+Y N   +A   LIV    T + E+  F +  +  +  E+  V   +  VT   P
Sbjct: 538 LVKGIEY-NASSFASFELIV----TDVNEVPVFPQRIFQANVSEDAAVGSRVGNVTARDP 592

Query: 73  RDLRVKYWLSNDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATD---TLMTTSATV 128
             L V Y L  +      I S  G+I     LD ETE +YR  V AT+   + ++++A  
Sbjct: 593 EGLTVSYSLKGNMRGWLKIDSVTGEIFSAAPLDRETESAYRVQVVATEVGGSSLSSTADF 652

Query: 129 NISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYE 188
           ++ + +VND  PR       LF  H PL+   PGS+I   E  D D+      SLR P +
Sbjct: 653 HLVLTDVNDNPPRLAKDYTGLFFCH-PLS--APGSLI--FEVTDDDQ-----QSLRRP-K 701

Query: 189 KMFSINDSGHISIVDLSALNTSTIQLVVVAT--------------DTGNPPRQASVPAIM 234
             F++   G  S  ++S +N +  +L    T              D G PP + +V   +
Sbjct: 702 FTFALGREGLQSDWEVSKINGTHARLSTRHTRFEEQVYNIPIRINDGGQPPMEGTVFLPV 761

Query: 235 HFPEAIVQQASSKLNSGTSS---TVLIILGVVL---IVLGFVIILLILYIHKNK 282
            F + +  + S    +G      TV + +G++L   +V+G ++ ++ + + K+K
Sbjct: 762 TFCQCV--EGSCFRPAGRQDGIPTVGMAVGILLTTFLVIGIILAVVFIRMRKDK 813


>gi|119713136|gb|ABL97205.1| hypothetical cadherin domain containing protein [uncultured marine
           bacterium EB0_49D07]
          Length = 2204

 Score = 61.6 bits (148), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 42/148 (28%), Positives = 72/148 (48%), Gaps = 8/148 (5%)

Query: 55  LENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFT 114
           LEN      + T ++  P    + Y LS    E FS+S  G ++L   LDYET   Y  T
Sbjct: 726 LENTATGTTIATSSSTDPEAGAISYSLSGTGSENFSVSSDGTVTLASALDYETTTEYAIT 785

Query: 115 VYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLAD-LTPGSVIGKVEAADG 173
           + A+D   + S T+ I+V ++N+       P     L     A+ ++ G+ I    A+D 
Sbjct: 786 LTASDGANSVSETLTINVGDINE------APSLTNSLAASTFAENVSTGTTIATASASDP 839

Query: 174 DKGDRVTLSLRGPYEKMFSINDSGHISI 201
           +    +T SL G   + F+++ +G+I++
Sbjct: 840 ES-QAITYSLSGTGSENFAVDSAGNITL 866



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 48/176 (27%), Positives = 79/176 (44%), Gaps = 11/176 (6%)

Query: 51  SVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGERFSISRQGDISLMQCLDYETEDS 110
           + S  E   V   + ++    P    + Y LS    + FSI   G+I+L   LDYET  S
Sbjct: 626 AASFAETSAVGAAIASINATDPEGSAMNYSLSGTGSDNFSIDASGNITLASGLDYETATS 685

Query: 111 YRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEA 170
           Y  TV A D    ++  + ISV +VN+         +  FL +        G+ I    +
Sbjct: 686 YELTVVADDGTYASTEVITISVADVNEAPTLSSTVAFNTFLENTA-----TGTTIATSSS 740

Query: 171 ADGDKGDRVTLSLRGPYEKMFSINDSGHISIVDLSALN---TSTIQLVVVATDTGN 223
            D + G  ++ SL G   + FS++  G +++   SAL+   T+   + + A+D  N
Sbjct: 741 TDPEAG-AISYSLSGTGSENFSVSSDGTVTLA--SALDYETTTEYAITLTASDGAN 793



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 47/171 (27%), Positives = 77/171 (45%), Gaps = 9/171 (5%)

Query: 52  VSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSY 111
           V+  E +P   V+ T +   P    + Y L     E  ++S  G+++L   LD+ET  + 
Sbjct: 531 VNVSETVPAGTVVATFSATDPEGNALTYSLGGTGSELMTVSETGEVTLTGNLDFETNSTL 590

Query: 112 RFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTP-GSVIGKVEA 170
              +  +D   TT   + I+V  +ND +P          L     A+ +  G+ I  + A
Sbjct: 591 VMVLEVSDGTNTTIEEITINV--INDDEP----ATIAATLSAASFAETSAVGAAIASINA 644

Query: 171 ADGDKGDRVTLSLRGPYEKMFSINDSGHISIVDLSALNTST-IQLVVVATD 220
            D  +G  +  SL G     FSI+ SG+I++       T+T  +L VVA D
Sbjct: 645 TD-PEGSAMNYSLSGTGSDNFSIDASGNITLASGLDYETATSYELTVVADD 694



 Score = 48.1 bits (113), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 39/134 (29%), Positives = 62/134 (46%), Gaps = 13/134 (9%)

Query: 14  VVRAIQYDNQDRYALATLIVSKAGTSLREL------------QFSKNEYSVSALENLPVN 61
           +  A+ Y+    YA+ TL  S    S+ E               + +  + +  EN+   
Sbjct: 770 LASALDYETTTEYAI-TLTASDGANSVSETLTINVGDINEAPSLTNSLAASTFAENVSTG 828

Query: 62  YVLLTVTTNKPRDLRVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDTL 121
             + T + + P    + Y LS    E F++   G+I+L   LDYET  SY  T+ A+D  
Sbjct: 829 TTIATASASDPESQAITYSLSGTGSENFAVDSAGNITLSSALDYETTTSYSLTLTASDGA 888

Query: 122 MTTSATVNISVVNV 135
            +TS T+NISV +V
Sbjct: 889 NSTSNTINISVDDV 902



 Score = 40.4 bits (93), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 45/81 (55%), Gaps = 3/81 (3%)

Query: 56   ENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGERFSI-SRQGDISLMQCLDYETEDSYRFT 114
            EN+     ++T + +      + Y ++ D   +FSI S  G+++L   LDYET+ S+ FT
Sbjct: 1012 ENISTGTSIMTASASGAEG-TMSYSIT-DSDNKFSINSSTGEVTLANALDYETKTSHTFT 1069

Query: 115  VYATDTLMTTSATVNISVVNV 135
            V ATD + T +    +SV ++
Sbjct: 1070 VTATDGVTTVTEEFTLSVTDM 1090


>gi|432103917|gb|ELK30750.1| Cadherin EGF LAG seven-pass G-type receptor 2 [Myotis davidii]
          Length = 2668

 Score = 61.6 bits (148), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 67/219 (30%), Positives = 101/219 (46%), Gaps = 22/219 (10%)

Query: 25  RYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWL 81
           R ALATL +    T+  +  F + EY  S  ENL V Y +LTV     + P +  + Y L
Sbjct: 50  RSALATLTILVTDTNDHDPVFEQQEYKESLRENLEVGYEVLTVRATDGDAPPNANILYRL 109

Query: 82  SNDYG----ERFSIS-RQGDISLMQCLDYETEDSYRFTVYATDT-----LMTTSATVNIS 131
               G    + F I  R G I     +D E  +SY+ TV A+D        + +A+V +S
Sbjct: 110 LEGPGGSPSDVFEIDPRSGVIRTRGPVDREEVESYQLTVEASDQGRDPGPRSATASVFLS 169

Query: 132 VVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYE 188
           V + ND  P+F   +Y + +      D+ PG+ + +V A+D DKG    +    + G   
Sbjct: 170 VEDDNDNAPQFSEKRYVVQV----REDVAPGAPVLRVTASDRDKGSNALVHYSIMSGNAR 225

Query: 189 KMFSIN-DSGHISIVD-LSALNTSTIQLVVVATDTGNPP 225
             F ++  +G + +V  L    T    L V A D G PP
Sbjct: 226 GQFYLDAQTGALDVVSPLDYETTKEYTLRVRAQDGGRPP 264



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 49/171 (28%), Positives = 80/171 (46%), Gaps = 15/171 (8%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGERFSIS---RQGDIS 98
           F    +  + LE++P+ Y++L V     +   + R++Y L+   G  F  +     G IS
Sbjct: 286 FVSTPFQATVLESVPLGYLVLHVQAIDADAGDNARLEYRLAG-VGHDFPFTINNGTGWIS 344

Query: 99  LMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIP 155
           +   LD E  D Y F V A D     +T SA+V++++++VND +P F  P+Y + L    
Sbjct: 345 VAAELDREEVDFYSFGVEARDHGTPALTASASVSVTILDVNDNNPTFTQPEYTVRLNE-- 402

Query: 156 LADLTPGSVIGKVEAADGDKGDRVTLSL-RGPYEKMFSINDSGHISIVDLS 205
             D   G+ +  V A D D    +T  +  G     FSI       +V L+
Sbjct: 403 --DAAVGTSVVTVSAVDRDAHSVITYQITSGNTRNRFSITSQSGGGLVSLA 451



 Score = 45.1 bits (105), Expect = 0.058,   Method: Compositional matrix adjust.
 Identities = 51/189 (26%), Positives = 86/189 (45%), Gaps = 14/189 (7%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRDLR--VKYWL-SNDYGERFSISRQ---GDIS 98
           F++ EY+V   E+  V   ++TV+    RD    + Y + S +   RFSI+ Q   G +S
Sbjct: 391 FTQPEYTVRLNEDAAVGTSVVTVSAVD-RDAHSVITYQITSGNTRNRFSITSQSGGGLVS 449

Query: 99  LMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLAD 158
           L   LDY+ E  Y   V A+D     +A V ++V + N   P F+   Y + +      D
Sbjct: 450 LALPLDYKLERQYVLAVTASDGTRQDTAQVVVNVTDANTHRPVFQSSHYTVNVNE----D 505

Query: 159 LTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSINDSGHISI-VDLSALNTSTIQLV 215
              G+ +  + A D D G+  R+T  +     +     D+G ++   +L   +  +  L 
Sbjct: 506 RPAGTTVVLISATDEDTGENARITYFMEDSIPQFRIDADTGAVTTQAELDYEDQVSYTLA 565

Query: 216 VVATDTGNP 224
           + A D G P
Sbjct: 566 ITARDNGIP 574



 Score = 44.7 bits (104), Expect = 0.076,   Method: Compositional matrix adjust.
 Identities = 40/149 (26%), Positives = 69/149 (46%), Gaps = 10/149 (6%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWL-SNDYGERFSIS-RQGDISL 99
           F ++E+ V   EN P+   +  VT   P +    ++ Y +   +  E F +    G+++ 
Sbjct: 702 FEQDEFDVFVEENSPIGLAVARVTATDPDEGTNAQIMYQIVEGNIPEVFQLDIFSGELTA 761

Query: 100 MQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPH--IPLA 157
           +  LDYE    Y   + AT   + + ATV++ +++ ND  P      +E+   +     +
Sbjct: 762 LVDLDYEDRPEYVLVIQATSAPLVSRATVHVRLLDRNDNPPVLG--NFEILFNNYVTNRS 819

Query: 158 DLTPGSVIGKVEAADGDKGDRVTLSL-RG 185
              PG  IG+V A D D  D +T S  RG
Sbjct: 820 SSFPGGAIGRVPAHDPDVSDSLTYSFERG 848


>gi|405977655|gb|EKC42094.1| Protein dachsous [Crassostrea gigas]
          Length = 2755

 Score = 61.6 bits (148), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 65/224 (29%), Positives = 103/224 (45%), Gaps = 15/224 (6%)

Query: 26  YALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKP---RDLRVKYWLS 82
           +A A + +S    +    QF  +   +   E+  ++  L T     P    +  + Y ++
Sbjct: 317 FATAQVNISITDVNDNSPQFQTSSLQIPVWEDEDLSTTLYTAHATDPDSGSNGVILYSMA 376

Query: 83  NDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDTL---MTTSATVNISVVNVNDW 138
            D    F + S  G+I+L++ LDYE    Y+  + A D      T++ ++ ISV+NVND 
Sbjct: 377 GDSSNTFKLNSTSGEITLLRSLDYEQVQLYKLYIEARDQGNPPRTSTLSLTISVLNVNDN 436

Query: 139 DPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGP-YEKMFSI-NDS 196
            P F    Y   +    L      S I +V+A D D GD V+ S R   Y  +F I + S
Sbjct: 437 SPVFSASSYVFNVSESALVQ----SNIDQVQATDRD-GDHVSYSFRDSMYLNLFGIGSSS 491

Query: 197 GHISIV-DLSALNTSTIQLVVVATDTGNPPRQASVPAIMHFPEA 239
           G I I  +L+        L VVA D+G   R +SVP  ++  +A
Sbjct: 492 GFIYIKQELNREEKDKYTLTVVARDSGKGYRSSSVPVTINVLDA 535



 Score = 61.2 bits (147), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 50/151 (33%), Positives = 79/151 (52%), Gaps = 10/151 (6%)

Query: 77  VKYWLSNDYGER-FSIS-RQGDISLMQCLDYETEDSYRFTVYATDTL-MTTSATVNISVV 133
           V+Y L N    R F++    G I + + LD+ET+ S+ FTV+A D   + ++A V +++ 
Sbjct: 58  VRYHLDNSTASRPFTVDPTSGQICVSKALDFETKQSHEFTVFARDAGDLESNAVVKVTLS 117

Query: 134 NVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR---GPYEKM 190
           +VND  P F YPQ   +  ++ L++   G+ I +V+A D D G   ++      G     
Sbjct: 118 DVNDNHPEF-YPQN--YSVNVDLSEANVGTTIVRVQAQDPDTGSAGSIQYSITAGNDRGF 174

Query: 191 FS-INDSGHISIVDLSALNTSTIQLVVVATD 220
           FS I  SG I++V    L     +L V ATD
Sbjct: 175 FSIITSSGRINLVSPLPLEEKIYKLEVTATD 205



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 61/197 (30%), Positives = 92/197 (46%), Gaps = 23/197 (11%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDL------RVKYWLSNDYG-ERFSI-SRQGD 96
            FS++ Y+V   ENLP    +L V   +  DL      ++ Y+L    G ++F + S  G 
Sbjct: 1079 FSQSSYTVDIQENLPPQSNVLQV---QATDLDIGVNGKLSYYLPPGVGGDKFVLDSTTGQ 1135

Query: 97   ISLMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
            +S    LD E + SY  T Y  D       +SAT+ + V +VND  P F   +  L +P 
Sbjct: 1136 LSTTASLDREAQASYTLTAYVRDFGYPERYSSATIVVRVTDVNDNLPVFVKDEVSLSIP- 1194

Query: 154  IPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-DSGHISIVDLSALNT 209
                + T    I +V A D D GD   LS   + G     F+I+ ++G +S   L     
Sbjct: 1195 ----ENTEQRAIHQVVAKDLDTGDNARLSYTIISGNVGSAFTIDPETGQLSCKSLDRETV 1250

Query: 210  STIQLVVVATDTGNPPR 226
            S+  L + A+D G+P R
Sbjct: 1251 SSYNLTIRASDHGSPQR 1267



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 60/227 (26%), Positives = 98/227 (43%), Gaps = 12/227 (5%)

Query: 8   LQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTV 67
           +Q   L + A    N  R +  +L +S    +     FS + Y  +  E+  V   +  V
Sbjct: 403 VQLYKLYIEARDQGNPPRTSTLSLTISVLNVNDNSPVFSASSYVFNVSESALVQSNIDQV 462

Query: 68  TTNKPRDLRVKYWLSND-YGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDT---LM 122
                    V Y   +  Y   F I S  G I + Q L+ E +D Y  TV A D+     
Sbjct: 463 QATDRDGDHVSYSFRDSMYLNLFGIGSSSGFIYIKQELNREEKDKYTLTVVARDSGKGYR 522

Query: 123 TTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTL- 181
           ++S  V I+V++ ND  P F+   Y  ++    L ++  G+++G+  A D D G+   L 
Sbjct: 523 SSSVPVTINVLDANDHSPVFKQSFYTFYI----LENMAAGTIVGQTTATDKDTGENAYLR 578

Query: 182 -SLRGPYEKMFSINDSGHI-SIVDLSALNTSTIQLVVVATDTGNPPR 226
                P   +   +D+G I + V L     +   L VVA+D G+P +
Sbjct: 579 YQFEQPEPHLKIDSDTGVITTTVSLDREEKNFYNLTVVASDHGDPKK 625



 Score = 51.2 bits (121), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 52/164 (31%), Positives = 83/164 (50%), Gaps = 16/164 (9%)

Query: 77  VKYWL-SNDYGERFSIS-RQGDISLMQCLDYETEDSYRFTVYAT--DTLMTTSATVNISV 132
           V+Y + S D    F+I+ R G IS  + LD+ET+     ++ A   D  +  +A VNIS+
Sbjct: 267 VRYSIASGDKNGLFAINDRTGVISSTKSLDHETQAFVLLSIRAEAGDPPVFATAQVNISI 326

Query: 133 VNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDR--VTLSLRGPYEKM 190
            +VND  P+F+     L +P     DL+  + +    A D D G    +  S+ G     
Sbjct: 327 TDVNDNSPQFQ--TSSLQIPVWEDEDLS--TTLYTAHATDPDSGSNGVILYSMAGDSSNT 382

Query: 191 FSIND-SGHISIVDLSALNTSTIQ---LVVVATDTGNPPRQASV 230
           F +N  SG I++  L +L+   +Q   L + A D GNPPR +++
Sbjct: 383 FKLNSTSGEITL--LRSLDYEQVQLYKLYIEARDQGNPPRTSTL 424



 Score = 48.9 bits (115), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 61/222 (27%), Positives = 100/222 (45%), Gaps = 16/222 (7%)

Query: 11   ITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTN 70
            +T  VR   Y   +RY+ AT++V     +     F K+E S+S  EN     +   V  +
Sbjct: 1152 LTAYVRDFGY--PERYSSATIVVRVTDVNDNLPVFVKDEVSLSIPENTEQRAIHQVVAKD 1209

Query: 71   --KPRDLRVKYWL-SNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDT---LMTT 124
                 + R+ Y + S + G  F+I  +      + LD ET  SY  T+ A+D       T
Sbjct: 1210 LDTGDNARLSYTIISGNVGSAFTIDPETGQLSCKSLDRETVSSYNLTIRASDHGSPQRNT 1269

Query: 125  SATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGD--RVTLS 182
               V + V++ ND  P+F   +Y     H    ++  G+ + +V A+D D+G+   +T S
Sbjct: 1270 MCRVFVKVLDKNDNYPQFSALEYA----HTIKENVVVGTFVLQVSASDIDEGENAHITYS 1325

Query: 183  LRGPYEKMFSIN-DSGHISIVDLSALNTST-IQLVVVATDTG 222
            L    + +F ++  SG+I+   L      T     VVA D G
Sbjct: 1326 LGNDTDGLFQVDSQSGNITTNGLFDYEKKTSYVFFVVAKDGG 1367



 Score = 40.0 bits (92), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 44/155 (28%), Positives = 67/155 (43%), Gaps = 13/155 (8%)

Query: 86   GERFSISR-QGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRY 144
            G  F+I R  G I+L + LD+E    Y   +   DT  +    + ++V + ND  P F  
Sbjct: 1753 GNTFTIDRFSGRITLAKPLDHEVRKHYAVGLSVNDTKHSAQTILEVNVEDENDNHPVFSQ 1812

Query: 145  PQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSINDSGHI-- 199
              Y+  +P    +    G  I  V A D D G    L+   +  P    +   ++G +  
Sbjct: 1813 QSYQADIPEFTGS----GVKILTVTATDADSGINSVLTYNLIVNPTGGFYIDPNTGELFT 1868

Query: 200  -SIVDLSALNTSTIQLVVVATDTGNPPRQASVPAI 233
               V+L   +   I LVV A D G  PR ++V AI
Sbjct: 1869 NKTVELRQ-DQQVITLVVTAQDGGR-PRLSAVVAI 1901



 Score = 39.7 bits (91), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 53/122 (43%), Gaps = 15/122 (12%)

Query: 83   NDYGERFSISRQGDISLM--QCLDYETEDSYRFTVYATDTLMTTS--------ATVNISV 132
            ND G      R G +S+     LDYET   ++  V ATD L   S        AT+ I+V
Sbjct: 2061 NDQGLFIVHGRTGAVSITPNATLDYETTTQHKLIVRATDCLGCNSTQIRFSAFATIVINV 2120

Query: 133  VNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFS 192
             +VN++ P F  P Y   +   P      G+ + +  A D D G    LS +     +F 
Sbjct: 2121 TDVNEYPPVFPVPFYYASVNEGPT-----GTKVFQAHANDKDGGPYGVLSYQIKNTVVFK 2175

Query: 193  IN 194
            I+
Sbjct: 2176 ID 2177



 Score = 38.5 bits (88), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 52/177 (29%), Positives = 86/177 (48%), Gaps = 28/177 (15%)

Query: 54  ALENLPVNYVLLTVTTNKPRDLRV-KYWLSNDYGERFSIS-RQGDISLMQCLDYETEDSY 111
           ALEN  ++Y L+        D+ V KY         F+I  + G ++ ++ LD+E ++ Y
Sbjct: 675 ALENGTISYSLIA-----EGDVNVLKY---------FAIHPKTGLVTTLEVLDFEQKNRY 720

Query: 112 RFTVYATDTLMTTSATVNISVVNV---NDWDPRFRYPQYELFLPHIPLADLTPGSVIGKV 168
              V A D      ++ +  VV+V   ND  P F      + +    + ++  GS++GKV
Sbjct: 721 ALGVIAKDHGNPARSSSSSLVVHVKDENDGRPIFSSQNLTIQV----VENIKTGSIVGKV 776

Query: 169 EAADGDKGD--RVTLS-LRGPYEKMFSINDS-GHI-SIVDLSALNTSTIQLVVVATD 220
           EA D D G+  RV+ S + G    +F++N S G+I  I ++     S+  L V A D
Sbjct: 777 EAKDWDSGENGRVSYSIIGGNVFDVFAVNVSNGNIYCIRNVDYEEASSHSLAVKAVD 833


>gi|345450784|gb|AEN93982.1| cadherin 1 [Oscarella sp. SN-2011]
          Length = 2330

 Score = 61.6 bits (148), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 54/210 (25%), Positives = 99/210 (47%), Gaps = 18/210 (8%)

Query: 26  YALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWL---- 81
           ++ A+++V+      +   F + +Y  +  EN PV   +  +  +     RV YW+    
Sbjct: 197 WSRASVVVNVTDGPSKAPVFDRFDYFATVEENRPVGTYVARLNASSDSG-RVVYWIHGGV 255

Query: 82  --SNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWD 139
              ++   RF IS  G ++    L+YE+   Y   V A+D      A +++SV++VND  
Sbjct: 256 TPKHNSPRRFRISSNGVVTTTDVLNYESVSDYIVVVEASDGEQKAYAVLHVSVIDVNDNS 315

Query: 140 PRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGD--RVTLSLRGPYE-KMFSIN-D 195
           P F + ++   +P     +   G+ +G+V A D D G   +VT  L+   + ++F ++ +
Sbjct: 316 PDFEFHEHRFVVPE----NRAVGAEVGRVFATDLDSGSNGKVTYKLKKALDAQLFDVDPN 371

Query: 196 SGHIS---IVDLSALNTSTIQLVVVATDTG 222
           +G IS   + D   L +     VV A D G
Sbjct: 372 TGRISTRTVFDRENLTSQYFYAVVEARDGG 401



 Score = 54.3 bits (129), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 60/193 (31%), Positives = 90/193 (46%), Gaps = 21/193 (10%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPR---DLRVKYWLSNDYGERFSISRQGDISLMQ 101
            F  + Y V   EN+ +   +LTV+        +  + Y L  D+ + F +S  G   +++
Sbjct: 837  FEASLYDVVVPENVRLFRDVLTVSATDADHGINAEIHYNLV-DFDDVFQLSSDGHFQVIR 895

Query: 102  CLDYETEDSYRFTVYATD----TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLA 157
             LDYET + Y  TV A D      +T +A V+++V +VND  P F    Y   +    + 
Sbjct: 896  PLDYETRNQYNLTVRAIDGGRRVQLTGTARVSVTVTDVNDNAPSFETTIYATKV----VE 951

Query: 158  DLTPGSVIGKVEAADGDKGDR--VTLSLRGPYEKMFSINDSGHI----SIVDLSALNTST 211
            +  P   + +V A+D D GD   VT +L      MFS+N S  I    S  D  A   S 
Sbjct: 952  NSPPAGFLIEVRASDPDTGDGGVVTYALESA-AGMFSLNSSTGILSSLSYFDREA--RSL 1008

Query: 212  IQLVVVATDTGNP 224
              L V+A D G+P
Sbjct: 1009 YDLSVLAIDGGSP 1021


>gi|440902409|gb|ELR53206.1| Protocadherin gamma-A5, partial [Bos grunniens mutus]
          Length = 803

 Score = 61.6 bits (148), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 61/197 (30%), Positives = 87/197 (44%), Gaps = 23/197 (11%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWLSND---YGERFSI-SRQGDI 97
           F++ EY VS  EN+ V   LLT+T   P +    ++ Y   N+     E F + S  G+I
Sbjct: 242 FTQPEYRVSVPENIAVGTRLLTLTATDPDEGINGKLTYSFRNEEEKISETFQLDSNLGEI 301

Query: 98  SLMQCLDYETEDSYRFTVYATD-TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
           S +Q LDYE    Y   V A D   +   A V I+V +VND  P       E+ L  +  
Sbjct: 302 STVQPLDYEESRFYNMEVVAQDGGALLARAKVLITVQDVNDNAP-------EVLLTSLSS 354

Query: 157 A---DLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDS--GHISIVDLSALNTST 211
               D  PG++I      DGD G+   +    P    F +  S   +  ++   AL+   
Sbjct: 355 TVSEDCLPGTIIALFSVHDGDSGENGEIVCSIPRNLPFKLEKSVDNYYHLLTTRALDREE 414

Query: 212 I---QLVVVATDTGNPP 225
           I    + V  TD GNPP
Sbjct: 415 ISDYNITVTVTDCGNPP 431



 Score = 41.6 bits (96), Expect = 0.60,   Method: Compositional matrix adjust.
 Identities = 53/214 (24%), Positives = 93/214 (43%), Gaps = 35/214 (16%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKP---RDLRVKYWLSNDYGERFSISR-------Q 94
           F    Y     EN P    + +V  + P    + +V Y L+ D  +   +S         
Sbjct: 452 FLHTSYYTYIPENNPRGISIFSVNAHDPDSGNNAQVTYALAEDKFQGMPLSSYVSINSDT 511

Query: 95  GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFL 151
           G +  ++  DYE     +  V A+D     ++++ ++++ +++ ND  P   YP     L
Sbjct: 512 GALYALRSFDYEQVRELQLWVTASDNGDPPLSSNVSLSLFILDQNDNAPEILYPA----L 567

Query: 152 P-----HIPLADLT--PGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-DSGHI- 199
           P      + LA  +  PG ++ KV A D D G    LS   L+     +F++   +G + 
Sbjct: 568 PIDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKASEPGLFTVGLHTGEVR 627

Query: 200 ---SIVDLSALNTSTIQLVVVATDTGNPPRQASV 230
              +++D  A+  +   LVVV  D G PP  A+V
Sbjct: 628 TARALLDRDAIKQN---LVVVVQDHGQPPLSATV 658



 Score = 39.3 bits (90), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 39/143 (27%), Positives = 62/143 (43%), Gaps = 17/143 (11%)

Query: 101 QCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLA 157
           + LD E    Y  TV  TD     ++T   + + V ++ND  P F +  Y  ++P     
Sbjct: 408 RALDREEISDYNITVTVTDCGNPPLSTENHIFLKVADINDNPPIFLHTSYYTYIPE---- 463

Query: 158 DLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSGHISI-VDLSAL--------- 207
           +   G  I  V A D D G+   ++     +K   +  S ++SI  D  AL         
Sbjct: 464 NNPRGISIFSVNAHDPDSGNNAQVTYALAEDKFQGMPLSSYVSINSDTGALYALRSFDYE 523

Query: 208 NTSTIQLVVVATDTGNPPRQASV 230
               +QL V A+D G+PP  ++V
Sbjct: 524 QVRELQLWVTASDNGDPPLSSNV 546


>gi|334331489|ref|XP_001362207.2| PREDICTED: protocadherin-7 isoform 1 [Monodelphis domestica]
          Length = 1252

 Score = 61.6 bits (148), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 57/183 (31%), Positives = 83/183 (45%), Gaps = 13/183 (7%)

Query: 57  NLPVNYVLLTVTTNKP--RDLRVKYWLSNDYGERFSIS-RQGDISLMQCLDYETEDSYRF 113
           N+P   V   V T+    ++  + Y L +     F+I    GDI +   LD E  D Y F
Sbjct: 552 NIPGERVATVVATDADSGKNAEIAYSLDSAVVGIFAIDPDSGDILVNTVLDREQNDRYEF 611

Query: 114 TVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEA 170
            V A D    ++  S TV + V + ND DP+F    +  ++      +L P S +G V  
Sbjct: 612 KVTAKDKGIPILQGSTTVIVQVADKNDNDPKFMQDVFTFYVKE----NLQPNSPVGMVTV 667

Query: 171 ADGDKGDRVTLSLRGPYE-KMFSI-NDSGHI-SIVDLSALNTSTIQLVVVATDTGNPPRQ 227
            D DKG    +SL    +  +FSI ND+G I S         ++    V A D G+PPR 
Sbjct: 668 MDADKGRNAEMSLYIEEDSSIFSIENDTGTIYSTTAFDRELQTSYTFKVKAVDGGDPPRS 727

Query: 228 ASV 230
           A+ 
Sbjct: 728 ATA 730



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 80/316 (25%), Positives = 136/316 (43%), Gaps = 46/316 (14%)

Query: 30  TLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVT---TNKPRDLRVKYWLSNDYG 86
           T+IV  A  +  + +F ++ ++    ENL  N  +  VT    +K R+  +  ++  D  
Sbjct: 628 TVIVQVADKNDNDPKFMQDVFTFYVKENLQPNSPVGMVTVMDADKGRNAEMSLYIEED-S 686

Query: 87  ERFSISRQ-GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRF 142
             FSI    G I      D E + SY F V A D      + +ATV++ V++ ND  P  
Sbjct: 687 SIFSIENDTGTIYSTTAFDRELQTSYTFKVKAVDGGDPPRSATATVSLFVMDENDNAPTV 746

Query: 143 RYPQ---YELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-D 195
            YP    Y L  P   +      +V+  V A D D G    L+   + G   K+F I+  
Sbjct: 747 TYPSNISYTLLPPSSNVR-----TVVATVLATDSDTGVNADLNYSIVGGNPFKLFEIDAT 801

Query: 196 SGHISIV-DLSALNTSTIQLVVVATDTGNPPRQASVPAIMHFPEA------IVQQASSKL 248
           SG +S+V  L+  +    +LVV   D+G P +  +    +   E+      I  Q +  L
Sbjct: 802 SGVVSLVGKLAQKHYGLHRLVVQVNDSGQPSQSTTTLVHVFVNESVSNATVIDSQITRSL 861

Query: 249 NSGTSSTVL-------------IILGVVLIVLGFVIILLILYIHKNKHTKN-NGPPGSSH 294
           ++  +  +              I++GVV  ++  ++I+LI+ + +   +KN NG      
Sbjct: 862 HTPLTQDIAGDPSYEISKQRLSIVIGVVAGIMTVILIILIVVMARYCRSKNKNGYEAGKK 921

Query: 295 SKNDSFLSNVILPEKH 310
              D F      P++H
Sbjct: 922 DHEDFF-----TPQQH 932



 Score = 43.1 bits (100), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 41/162 (25%), Positives = 69/162 (42%), Gaps = 30/162 (18%)

Query: 93  RQGDISLMQCLDYETEDSYRFTVY---ATDTLMTTSATVNISVVNVNDWDPRFRYPQYEL 149
           +Q  + +   LD E  DSY  T+      D   ++ A + + + +VND  PRF    YE 
Sbjct: 260 KQPQLIVKGALDREQRDSYELTLRVRDGGDPPRSSQAILRVLITDVNDNSPRFEKSVYEA 319

Query: 150 FLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSI------------NDSG 197
            L      + TPG+ I ++ AAD D G      + G  E +F                +G
Sbjct: 320 DLAE----NSTPGTPILQLRAADLDVG------VNGQIEYVFGAATENVRRLLRLDETTG 369

Query: 198 HISI---VDLSALNTSTIQLVVVATDTGNPPRQASVPAIMHF 236
            +S+   +D   +N   ++  V+A D G PP+      +++ 
Sbjct: 370 WLSVLHRIDREEVN--QLRFTVMARDRGQPPKTDKATVVLNI 409


>gi|156365971|ref|XP_001626915.1| predicted protein [Nematostella vectensis]
 gi|156213808|gb|EDO34815.1| predicted protein [Nematostella vectensis]
          Length = 850

 Score = 61.6 bits (148), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 57/195 (29%), Positives = 98/195 (50%), Gaps = 19/195 (9%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTTNKPRD----LRVKYWLSNDYGERFSIS-RQGDIS 98
           QF+++EYS + LEN+PV    +T+ T +  D     ++ Y L+   G  FSI    G I 
Sbjct: 642 QFNQSEYSATVLENMPVG-TKVTMVTARDEDSGINSQIMYSLTGGDG-VFSIEPSTGQIR 699

Query: 99  LMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIP 155
           L + ++ E +++Y  T+ A+D    ++++ A V++ V++VND  P F    YE  +    
Sbjct: 700 LQKAINREAKENYHVTITASDRGTPVLSSDAKVHVHVLDVNDNPPVFTSRVYERTMSE-- 757

Query: 156 LADLTPGSVIGKVEAADGD--KGDRVTLSLRGPYEKMFSINDSGHISIVDLSALNTST-- 211
             +   G  + +V A D D  +   VT ++      MF+IN++  + I     LN  +  
Sbjct: 758 -GNAAAGEFVVQVNATDADVERNGHVTYTIMHGALGMFTINETTGV-IRTQGVLNRESKD 815

Query: 212 -IQLVVVATDTGNPP 225
              L+V+A D G  P
Sbjct: 816 FYTLIVMARDQGAVP 830



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 48/171 (28%), Positives = 82/171 (47%), Gaps = 14/171 (8%)

Query: 13  LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKP 72
           L V AI      R    T+ V+    +    +F+K  ++V   E + V  V++  T   P
Sbjct: 406 LNVSAIDGSYSPREGYGTVTVTLQDVNDNTPKFTKPAFNVDVSEGVAVGSVIVNATATDP 465

Query: 73  ---RDLRVKYWLSNDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATD-TLMTTSAT 127
               +  + Y +S      F+I S  G +++ + LD ET+ +Y FTV+A D   + ++  
Sbjct: 466 DQGSNAAITYSMSY---PGFAINSNTGSVTITRPLDRETKQAYSFTVHARDGGGLESNVA 522

Query: 128 VNISVVNVNDWDPRFRYPQYELFLPHIPLADLTP-GSVIGKVEAADGDKGD 177
           VN+ + + ND  P+F   QY+       + D TP G+++  V A D D G+
Sbjct: 523 VNVEIGDENDNSPQFPTVQYQ-----TDVIDRTPVGTIVLAVNAEDRDVGN 568



 Score = 40.4 bits (93), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 36/115 (31%), Positives = 54/115 (46%), Gaps = 12/115 (10%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWL-SNDYGERF----SISRQGD 96
           F+   YS +  EN PV   LL VT    +  ++  V Y + + D    F     +S  G 
Sbjct: 114 FNPTNYSTTVFENSPVGTSLLDVTATDADSGQNAYVTYSVTAGDSHGLFRAVTKVSNHGT 173

Query: 97  ISLMQCLDYETEDSYRFTVYATDTLMTTSAT-VNISVVNV---NDWDPRFRYPQY 147
           I +   LD E  D Y  T+ ATD  +  S T + I++V +   ND  P+F + +Y
Sbjct: 174 IEVAGNLDREVNDFYNLTITATDGGVPISRTAIAIALVRILDRNDNVPKFSHARY 228



 Score = 38.5 bits (88), Expect = 6.2,   Method: Compositional matrix adjust.
 Identities = 38/143 (26%), Positives = 66/143 (46%), Gaps = 13/143 (9%)

Query: 67  VTTNKPR---DLRVKYWLSNDYGERFSISRQ-GDISLMQCLDYETEDSYRFTVYATDTLM 122
           VT N P    + R+ + +++    +F I R  G + +   LD E +  Y   V A D   
Sbjct: 356 VTANDPDSGLNGRIFFSINSGSEGKFEIGRSDGVVRVSGSLDREAKAVYVLNVSAIDGSY 415

Query: 123 TTS---ATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRV 179
           +      TV +++ +VND  P+F  P + + +       +  GSVI    A D D+G   
Sbjct: 416 SPREGYGTVTVTLQDVNDNTPKFTKPAFNVDVSE----GVAVGSVIVNATATDPDQGSNA 471

Query: 180 TLSLRGPYEKMFSIN-DSGHISI 201
            ++    Y   F+IN ++G ++I
Sbjct: 472 AITYSMSYPG-FAINSNTGSVTI 493


>gi|410910412|ref|XP_003968684.1| PREDICTED: protocadherin-16-like [Takifugu rubripes]
          Length = 3253

 Score = 61.6 bits (148), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 67/232 (28%), Positives = 109/232 (46%), Gaps = 17/232 (7%)

Query: 13   LVVRAIQYDNQ-DRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVN----YVLLTV 67
            L V A Q   Q  +   AT+ +S    +    +F+++   ++  EN+P      +V  T 
Sbjct: 1074 LTVLATQGHGQLKKTGSATVRISVTDENDNSPRFTQDRVFMAVKENMPAGSGFGHVSATD 1133

Query: 68   TTNKPRDLRVKYWLSNDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDTL---MT 123
              + P       +L  D    F I S  G+I+    LD E + SY+  V   D      +
Sbjct: 1134 RDSGPNGRLSYRFLHPD--RHFQINSHTGEINTKTVLDREQQSSYQLIVLVQDGGSPPRS 1191

Query: 124  TSATVNISVVNVNDWDPRFRY-PQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTL- 181
             + T  I+V++ ND DP F + P  +  +  +  +  + G ++G ++A D D+G+  T+ 
Sbjct: 1192 ATGTAFITVLDDNDNDPAFTHSPSGKNLILQVTESQAS-GVLLGTLQAKDPDEGENGTVF 1250

Query: 182  -SLRGPYEKMFSIN-DSGHI-SIVDLSALNTSTIQLVVVATDTGNPPRQASV 230
             SL GP    FS+N +SG + S   LS  + +   L+V ATD G PPR  S 
Sbjct: 1251 YSLTGPRADRFSLNPNSGELHSASALSHSDRAEYSLMVTATDRGQPPRSTSC 1302



 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 68/205 (33%), Positives = 90/205 (43%), Gaps = 19/205 (9%)

Query: 45   FSKNEYSVSALENLPVNYVLLTV------TTNKPRDLRVKYWLSNDY-GERFSI-SRQGD 96
            F    Y V   E  P+N   L V      T+       + Y L  D     F I S  G 
Sbjct: 998  FDTLTYRVELKEGTPINKRFLQVRALNRETSGTGHFGPLSYHLRPDGDAAAFGIASDSGW 1057

Query: 97   ISLMQCLDYETEDSYRFTVYATDT----LMTTSATVNISVVNVNDWDPRFRYPQYELFLP 152
            + +   LD E +D Y  TV AT        T SATV ISV + ND  PRF   Q  +F+ 
Sbjct: 1058 LFVKSTLDREVKDMYLLTVLATQGHGQLKKTGSATVRISVTDENDNSPRFT--QDRVFM- 1114

Query: 153  HIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPY-EKMFSIND-SGHISIVD-LSALNT 209
                 ++  GS  G V A D D G    LS R  + ++ F IN  +G I+    L     
Sbjct: 1115 -AVKENMPAGSGFGHVSATDRDSGPNGRLSYRFLHPDRHFQINSHTGEINTKTVLDREQQ 1173

Query: 210  STIQLVVVATDTGNPPRQASVPAIM 234
            S+ QL+V+  D G+PPR A+  A +
Sbjct: 1174 SSYQLIVLVQDGGSPPRSATGTAFI 1198



 Score = 58.5 bits (140), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 79/297 (26%), Positives = 134/297 (45%), Gaps = 25/297 (8%)

Query: 13   LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNY---VLLTVTT 69
            L+V+A   D Q +YALA + +     +     F     + S  EN P N    VL  V  
Sbjct: 2635 LIVQAT--DGQGQYALAPVSIEVKDINDNRPFFPLKLLTASIRENKPQNALVTVLHAVDH 2692

Query: 70   NKPRDLRVKYWL---SNDYGERFSISR-QGDISLMQCLDYETEDSYRFTVYATDTL-MTT 124
            +K    ++KY++   S+D  E F I++  G++      D+E  +S+ F   A D    + 
Sbjct: 2693 DKGVFGQLKYYMLDKSSDGKETFFINQTSGEVRTRCSFDFEKLNSFSFVAVAMDAGNYSA 2752

Query: 125  SATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG-DRVTLSL 183
            + TV + V   +++DP F    +   +P         G +IGKV+A D D G D + L  
Sbjct: 2753 TVTVQVYVTGEDEYDPVFTSSDFSFKVPE----GAKKGQIIGKVQAQDEDGGVDGIVLYS 2808

Query: 184  RGPYEKMFSIN-DSGHISI-VDLSAL--NTSTIQLVVVATD-TGNPPRQASVPAIMHFPE 238
                   F +N  SG IS+ +D  +   + S  +L ++  D T + P + S  A      
Sbjct: 2809 LVHASPYFEVNRSSGAISLRMDSHSTPGSRSKRELRLMTLDITAHSPLETSRIAAAKVIV 2868

Query: 239  AIVQQA---SSKLNSGTSSTVLIILG--VVLIVLGFVIILLILYIHKNKHTKNNGPP 290
             +   +   ++ +N+   S V + LG  V+LI++   +I + L  HK +  K+   P
Sbjct: 2869 DVTHTSFGLTTDMNTLLISVVAVSLGTIVILIMIAVALIFVRLRRHKKEQQKHRQAP 2925



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 55/193 (28%), Positives = 96/193 (49%), Gaps = 16/193 (8%)

Query: 47   KNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWL-SNDYGERFSIS-RQGDISLMQ 101
            ++  SVS +E+ PV +V L V     ++  + RV Y + S + G +FS++   G +S+ +
Sbjct: 1535 RSPASVSVMEDQPVGFVTLYVMATDADEGENGRVTYRIQSGNTGGKFSLNPNTGSLSIFK 1594

Query: 102  CLDYETEDSYRFTVYATDTLM---TTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLAD 158
             LD E +D +  T+ A D  +   +++  + + V++VND  P F   QYE  +      +
Sbjct: 1595 PLDREDQDIFNLTIIAEDHGIPQRSSTQLLCVHVIDVNDEVPWFEETQYEAQISE----N 1650

Query: 159  LTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSGHISIVDLSALNTSTIQ---LV 215
               G+ +  V A+D D+G    ++  G  EK F+IN    + I    +L+    +   + 
Sbjct: 1651 RPSGTEVLTVSASDLDQGPNGQVTYGGIAEKDFNINPVTGV-ITTTKSLDRELQEYYTVT 1709

Query: 216  VVATDTGNPPRQA 228
            V A D G PP  A
Sbjct: 1710 VYAKDGGLPPNYA 1722



 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 54/170 (31%), Positives = 77/170 (45%), Gaps = 33/170 (19%)

Query: 84  DYGE-------------RFSISRQGDISLMQC----LDYETEDSYRFTVYATDTL---MT 123
           DYGE             +F+++ + +I  + C    LD E  D+Y   V ATD+    + 
Sbjct: 391 DYGEYANVNVSLEGGEGKFALTTKDNIIYLICVDRILDREERDTYELRVMATDSGTPPLR 450

Query: 124 TSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTL 181
             ++  I V +VND  P F  P Y   +P +    + PGS + +V A D D G    +  
Sbjct: 451 AESSFIIQVTDVNDNPPLFDQPVYRQVIPEV----VFPGSFVLQVTARDKDHGPNGDIAY 506

Query: 182 SL---RGPYEKMFSINDSGHISIVDLSALN---TSTIQLVVVATDTGNPP 225
           SL   +G Y K FSI+    I I   S L+        + VVATD G PP
Sbjct: 507 SLFQDQGAYNKWFSIDSVTGI-ITTHSQLDYEKNPNPSITVVATDGGKPP 555



 Score = 48.1 bits (113), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 48/155 (30%), Positives = 74/155 (47%), Gaps = 14/155 (9%)

Query: 79   YWLSNDYGER--FSISR-QGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNV 135
            Y L+ D   R  F I R  G +SL   LDYE    Y  TV  +D+   + A + + V +V
Sbjct: 2274 YTLTLDMNSRDMFGIHRYGGGVSLTGPLDYEERTWYTVTVSTSDSKHHSEANLTVLVDDV 2333

Query: 136  NDWDPRFRYPQYELFL-PHIPLADLTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFS 192
            ND  P F    Y++ +  H+P      GS +  V A D D GD  ++T  +    + +F 
Sbjct: 2334 NDNAPTFTQDVYQVTVSEHLPA-----GSAVITVTATDRDSGDNGKITYRVMSSTKGIFY 2388

Query: 193  INDS-GHISIVDLSALNTS--TIQLVVVATDTGNP 224
            I+ S G +     +A ++   +I +V+ A D G P
Sbjct: 2389 IDPSNGTLFANQRTAFDSENPSILVVIEAQDQGTP 2423



 Score = 45.8 bits (107), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 58/220 (26%), Positives = 91/220 (41%), Gaps = 28/220 (12%)

Query: 12   TLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNK 71
            TL+V+A+   N  + +L  +I+       R ++FS+    V+  EN     V+       
Sbjct: 2020 TLIVQAMDQGNPAQSSLGVVIIYLREQIYRGIRFSRTTRDVALQENASKGTVVTQTQARY 2079

Query: 72   PRDLRVKYWLSNDYGERFSISRQGDISLMQC--LDYETEDSYRFTVYATDTLMTTSATVN 129
            P                   S+ GDI + +   LD+E     R  V A     ++   VN
Sbjct: 2080 PDG-----------------SQTGDIWVQKSEGLDFEETPKLRLVVKAESASSSSYMAVN 2122

Query: 130  ISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGD--RVTLSLR-GP 186
            + + +VND  PRF+   Y  ++      D      I +V A D D+G   +V  SLR   
Sbjct: 2123 LILQDVNDNLPRFQLQNYVAYIREAQGYDFP----IIQVAAVDLDQGQNGQVIYSLRSSS 2178

Query: 187  YEKMFSIND-SGHISIVDLSALNTST-IQLVVVATDTGNP 224
               +F I+  +G I+   +      T  +LVV ATD G P
Sbjct: 2179 MSGLFKIDPLTGSITTAAIMDREIWTETKLVVTATDRGTP 2218



 Score = 44.7 bits (104), Expect = 0.079,   Method: Compositional matrix adjust.
 Identities = 57/196 (29%), Positives = 89/196 (45%), Gaps = 25/196 (12%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRDL------RVKYWLSNDYGE----RFSISRQ 94
           F +N Y+VS  EN      +L VT    RD        + Y LS+        +F+I ++
Sbjct: 576 FERNVYNVSIKENTAPGTCILEVTA---RDADGGSFGSISYSLSSGIKSASPSQFTIGKE 632

Query: 95  -GDISLMQCLDYE-TEDSYRFTVYATDTL-MTTSATVNISVVNVNDWDPRFRYPQYELFL 151
            G I     LD +    S+ FTV A D   +++ A V + VV++ND  P F    Y + L
Sbjct: 633 TGQICTTAVLDRDHGPASFDFTVTAVDGGGLSSVAYVKVDVVDINDNRPTFYPVNYAVSL 692

Query: 152 PHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR---GPYEKMFSIN-DSGHISIV-DLSA 206
                    PG+ + +V A D D G+   ++ +   G     F++N D+G IS+   +  
Sbjct: 693 S----TQSAPGTSVVRVMAYDPDSGENGRITYKTAPGGASPYFTLNKDTGVISLSRSVFG 748

Query: 207 LNTSTIQLVVVATDTG 222
              S I +V+ A D G
Sbjct: 749 KANSVIPMVISAQDGG 764



 Score = 44.7 bits (104), Expect = 0.083,   Method: Compositional matrix adjust.
 Identities = 61/212 (28%), Positives = 99/212 (46%), Gaps = 22/212 (10%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTTNKPRDL------RVKYWLSNDYGERFSISRQ-GD 96
            QF  + Y+    E++P+   +L V   K  DL      RV Y++S+     F I +  G 
Sbjct: 1843 QFESSAYTADIPEDIPIGSHVLDV---KATDLDEGPNSRVLYFMSSSSHSMFIIDQDTGS 1899

Query: 97   ISLMQCLDYETEDSYRFTVYATDTL----MTTSATVNISVVNVNDWDPRFRYPQYELFLP 152
            I     LD E   SY F V ATD+     + ++  V I+V +VND  P F     +  + 
Sbjct: 1900 IITTAPLDREKIASYTFKVCATDSSPLNPLNSTTEVTIAVQDVNDNAPFF---IQDPLIV 1956

Query: 153  HIPLADLTPGSVIGKVEAADGDKGDRVTLSLR--GPYEKMFSIND-SGHISIVD-LSALN 208
            ++ ++  +   V+  + A D D G   ++  R   P  + F+IN  +G I + + L  L+
Sbjct: 1957 NVSVSSASSRRVLATMRAEDKDFGANGSVFYRFANPV-RGFTINSLTGDIQVTEKLQTLS 2015

Query: 209  TSTIQLVVVATDTGNPPRQASVPAIMHFPEAI 240
             S   L+V A D GNP + +    I++  E I
Sbjct: 2016 QSQRTLIVQAMDQGNPAQSSLGVVIIYLREQI 2047



 Score = 44.7 bits (104), Expect = 0.087,   Method: Compositional matrix adjust.
 Identities = 65/252 (25%), Positives = 109/252 (43%), Gaps = 38/252 (15%)

Query: 2    INEDDF-LQPITLVV---RAIQYDNQDRYALATLI--------VSKAGTSLRELQ----- 44
            I E DF + P+T V+   +++  + Q+ Y +             +KA   +R L      
Sbjct: 1678 IAEKDFNINPVTGVITTTKSLDRELQEYYTVTVYAKDGGLPPNYAKATVRIRVLDENDNA 1737

Query: 45   --FSKNEYSVSALENLPVN--YVLLTVTTNKPRDLRVKYWLS-NDYGERFSISR-QGDIS 98
              F +  Y++   ENL     + L     +      + Y +S  D    F + R  G +S
Sbjct: 1738 PVFGRLYYNIEVPENLDAMPLFTLRANDQDTGESAIINYKISAGDLAGDFHLDRMSGVLS 1797

Query: 99   LMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIP 155
              + LD E    Y  T+ A D     +++ ATV ++++++ND  P+F    Y   +P   
Sbjct: 1798 TSRPLDREMRTGYTLTITAQDQGHPALSSIATVEVTILDINDHSPQFESSAYTADIPE-- 1855

Query: 156  LADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIN-DSGHISIVDLSALNTSTI 212
              D+  GS +  V+A D D+G   RV   +      MF I+ D+G  SI+  + L+   I
Sbjct: 1856 --DIPIGSHVLDVKATDLDEGPNSRVLYFMSSSSHSMFIIDQDTG--SIITTAPLDREKI 1911

Query: 213  Q---LVVVATDT 221
                  V ATD+
Sbjct: 1912 ASYTFKVCATDS 1923



 Score = 42.0 bits (97), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 45/143 (31%), Positives = 71/143 (49%), Gaps = 15/143 (10%)

Query: 103 LDYETEDSYRFTVYAT--DTLMTTSATVNISVVNVNDWDPRFRYPQYE-LFLP-HIPLAD 158
           LD+E + S    V A   +        V+IS+ ++ND  P F    YE L LP H  +  
Sbjct: 850 LDHEAQSSLDLEVQARSGNPPAFGQTRVHISITDINDNPPVFSPSPYESLLLPEHTEM-- 907

Query: 159 LTPGSVIGKVEAADGDKG--DRVTLSLRGPY--EKMFSIN-DSGHISIV-DLSALNTSTI 212
              G+V+ +V+A D D G   +++  L  P   ++ FSI+  SG I +V  L+  +T   
Sbjct: 908 ---GTVVYRVQAEDQDSGANGQLSFDLFSPSGTQRTFSIDRSSGEIRLVGSLNYESTPRY 964

Query: 213 QLVVVATDTGNPPRQASVPAIMH 235
            L V+A D+G P   A+   ++H
Sbjct: 965 DLQVIAKDSGVPQLSATFVLVVH 987



 Score = 42.0 bits (97), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 59/213 (27%), Positives = 92/213 (43%), Gaps = 33/213 (15%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDL----RVKYW-LSNDYGERFSISRQGDISL 99
            F+++ Y V+  E+LP    ++TVT    RD     ++ Y  +S+  G  +     G +  
Sbjct: 2340 FTQDVYQVTVSEHLPAGSAVITVTATD-RDSGDNGKITYRVMSSTKGIFYIDPSNGTLFA 2398

Query: 100  MQCLDYETED-SYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIP 155
             Q   +++E+ S    + A D     +++ ATV++ V +VND  P F   +Y   L    
Sbjct: 2399 NQRTAFDSENPSILVVIEAQDQGTPSLSSIATVHVHVTDVNDNAPIFHQLEYRASLSE-- 2456

Query: 156  LADLTPGSVIGKVEAADGDKGDRVTLSL-----RGPYEKMFSINDS-----GH------- 198
              D  PGS I  +EA DGD  +R           G     F I  S     GH       
Sbjct: 2457 --DDVPGSAILTLEAVDGDV-NRENCGFDFAIASGNSGNTFQIESSVRYLEGHGFQTVGS 2513

Query: 199  -ISIVDLSALNTSTIQLVVVATDTGNPPRQASV 230
             I + +L     ++  L VV +D G P R +SV
Sbjct: 2514 LILVEELDYEAVASYNLTVVVSDRGIPQRSSSV 2546



 Score = 41.2 bits (95), Expect = 0.84,   Method: Compositional matrix adjust.
 Identities = 40/128 (31%), Positives = 61/128 (47%), Gaps = 13/128 (10%)

Query: 58  LPVNYVLLTVTTNKPR--DLRVKYWLSND---YGERFSI-SRQGDISLMQCLDYETEDSY 111
            P ++VL     +K    +  + Y L  D   Y + FSI S  G I+    LDYE   + 
Sbjct: 483 FPGSFVLQVTARDKDHGPNGDIAYSLFQDQGAYNKWFSIDSVTGIITTHSQLDYEKNPNP 542

Query: 112 RFTVYATDTL---MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKV 168
             TV ATD     ++++A VNI + ++ND +P F    Y + +      +  PG+ I +V
Sbjct: 543 SITVVATDGGKPPLSSTAVVNIVLQDINDNEPVFERNVYNVSIKE----NTAPGTCILEV 598

Query: 169 EAADGDKG 176
            A D D G
Sbjct: 599 TARDADGG 606



 Score = 40.4 bits (93), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 45/155 (29%), Positives = 68/155 (43%), Gaps = 16/155 (10%)

Query: 92   SRQGDISLMQCLDYETEDSYRFTVYATDTLMTT------SATVNISVVNVNDWDPRFRYP 145
            S  G +S+   LD+E   S    V ATD+          S T  + + + ND  P FR P
Sbjct: 1478 SSTGVLSIAHELDHEVTPSLLLVVKATDSAHDASQRRWGSVTARVYITDENDNPPVFRSP 1537

Query: 146  QYELFLPHIPLADLTPGSVIGKVEAADGDKGD--RVTLSLR-GPYEKMFSIN-DSGHISI 201
                 +   P+     G V   V A D D+G+  RVT  ++ G     FS+N ++G +SI
Sbjct: 1538 ASVSVMEDQPV-----GFVTLYVMATDADEGENGRVTYRIQSGNTGGKFSLNPNTGSLSI 1592

Query: 202  VD-LSALNTSTIQLVVVATDTGNPPRQASVPAIMH 235
               L   +     L ++A D G P R ++    +H
Sbjct: 1593 FKPLDREDQDIFNLTIIAEDHGIPQRSSTQLLCVH 1627



 Score = 38.9 bits (89), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 55/195 (28%), Positives = 83/195 (42%), Gaps = 23/195 (11%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDL---RVKYWL-SNDYGERFSISR-QGDISL 99
            FS+ EYSV   E +     +L ++   P       V+Y + S D  E F + R  G + L
Sbjct: 2562 FSRAEYSVVLSEGVAAGTEILHLSATDPDSTPNGEVQYSICSGDETELFQVDRWTGALRL 2621

Query: 100  MQCLDYETEDSYRFTVYATDTLMTTS-ATVNISVVNVNDWDPRFRYPQYELFLPHIPLAD 158
             + L  E++ ++   V ATD     + A V+I V ++ND  P F      L L    + +
Sbjct: 2622 QRALGRESQSTHVLIVQATDGQGQYALAPVSIEVKDINDNRPFF-----PLKLLTASIRE 2676

Query: 159  LTP-GSVIGKVEAADGDKG-----DRVTLSLRGPYEKMFSIND-SGHISI---VDLSALN 208
              P  +++  + A D DKG         L      ++ F IN  SG +      D   LN
Sbjct: 2677 NKPQNALVTVLHAVDHDKGVFGQLKYYMLDKSSDGKETFFINQTSGEVRTRCSFDFEKLN 2736

Query: 209  TSTIQLVVVATDTGN 223
              +   V VA D GN
Sbjct: 2737 --SFSFVAVAMDAGN 2749


>gi|334331487|ref|XP_003341493.1| PREDICTED: protocadherin-7 isoform 3 [Monodelphis domestica]
          Length = 1260

 Score = 61.6 bits (148), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 57/183 (31%), Positives = 83/183 (45%), Gaps = 13/183 (7%)

Query: 57  NLPVNYVLLTVTTNKP--RDLRVKYWLSNDYGERFSIS-RQGDISLMQCLDYETEDSYRF 113
           N+P   V   V T+    ++  + Y L +     F+I    GDI +   LD E  D Y F
Sbjct: 552 NIPGERVATVVATDADSGKNAEIAYSLDSAVVGIFAIDPDSGDILVNTVLDREQNDRYEF 611

Query: 114 TVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEA 170
            V A D    ++  S TV + V + ND DP+F    +  ++      +L P S +G V  
Sbjct: 612 KVTAKDKGIPILQGSTTVIVQVADKNDNDPKFMQDVFTFYVKE----NLQPNSPVGMVTV 667

Query: 171 ADGDKGDRVTLSLRGPYE-KMFSI-NDSGHI-SIVDLSALNTSTIQLVVVATDTGNPPRQ 227
            D DKG    +SL    +  +FSI ND+G I S         ++    V A D G+PPR 
Sbjct: 668 MDADKGRNAEMSLYIEEDSSIFSIENDTGTIYSTTAFDRELQTSYTFKVKAVDGGDPPRS 727

Query: 228 ASV 230
           A+ 
Sbjct: 728 ATA 730



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 82/317 (25%), Positives = 138/317 (43%), Gaps = 48/317 (15%)

Query: 30  TLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVT---TNKPRDLRVKYWLSNDYG 86
           T+IV  A  +  + +F ++ ++    ENL  N  +  VT    +K R+  +  ++  D  
Sbjct: 628 TVIVQVADKNDNDPKFMQDVFTFYVKENLQPNSPVGMVTVMDADKGRNAEMSLYIEED-S 686

Query: 87  ERFSISRQ-GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRF 142
             FSI    G I      D E + SY F V A D      + +ATV++ V++ ND  P  
Sbjct: 687 SIFSIENDTGTIYSTTAFDRELQTSYTFKVKAVDGGDPPRSATATVSLFVMDENDNAPTV 746

Query: 143 RYPQ---YELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTL--SLRG--PYEKMFSIN- 194
            YP    Y L  P   +      +V+  V A D D G    L  S+ G  P+ K+F I+ 
Sbjct: 747 TYPSNISYTLLPPSSNVR-----TVVATVLATDSDTGVNADLNYSIVGGNPF-KLFEIDA 800

Query: 195 DSGHISIV-DLSALNTSTIQLVVVATDTGNPPRQASVPAIMHFPEA------IVQQASSK 247
            SG +S+V  L+  +    +LVV   D+G P +  +    +   E+      I  Q +  
Sbjct: 801 TSGVVSLVGKLAQKHYGLHRLVVQVNDSGQPSQSTTTLVHVFVNESVSNATVIDSQITRS 860

Query: 248 LNSGTSSTVL-------------IILGVVLIVLGFVIILLILYIHKNKHTKN-NGPPGSS 293
           L++  +  +              I++GVV  ++  ++I+LI+ + +   +KN NG     
Sbjct: 861 LHTPLTQDIAGDPSYEISKQRLSIVIGVVAGIMTVILIILIVVMARYCRSKNKNGYEAGK 920

Query: 294 HSKNDSFLSNVILPEKH 310
               D F      P++H
Sbjct: 921 KDHEDFF-----TPQQH 932



 Score = 43.1 bits (100), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 41/162 (25%), Positives = 69/162 (42%), Gaps = 30/162 (18%)

Query: 93  RQGDISLMQCLDYETEDSYRFTVY---ATDTLMTTSATVNISVVNVNDWDPRFRYPQYEL 149
           +Q  + +   LD E  DSY  T+      D   ++ A + + + +VND  PRF    YE 
Sbjct: 260 KQPQLIVKGALDREQRDSYELTLRVRDGGDPPRSSQAILRVLITDVNDNSPRFEKSVYEA 319

Query: 150 FLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSI------------NDSG 197
            L      + TPG+ I ++ AAD D G      + G  E +F                +G
Sbjct: 320 DLAE----NSTPGTPILQLRAADLDVG------VNGQIEYVFGAATENVRRLLRLDETTG 369

Query: 198 HISI---VDLSALNTSTIQLVVVATDTGNPPRQASVPAIMHF 236
            +S+   +D   +N   ++  V+A D G PP+      +++ 
Sbjct: 370 WLSVLHRIDREEVN--QLRFTVMARDRGQPPKTDKATVVLNI 409


>gi|312080128|ref|XP_003142468.1| hypothetical protein LOAG_06885 [Loa loa]
 gi|307762369|gb|EFO21603.1| hypothetical protein LOAG_06885, partial [Loa loa]
          Length = 1164

 Score = 61.6 bits (148), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 62/205 (30%), Positives = 97/205 (47%), Gaps = 21/205 (10%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRDL------RVKYWLSNDYG-ERFSI-SRQGD 96
           F +N Y     E+ P+   L +V     RDL       + YWL  + G E   I S  G 
Sbjct: 261 FERNSYYAEIREDAPIGTTLASVFA---RDLDIGLNGEITYWLGEEDGAELLQIHSSTGV 317

Query: 97  ISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
           I   Q LD E  +  R  VYATD     MT+ A + I++++VND  P F   + E F   
Sbjct: 318 IQTAQHLDRELMNIIRIYVYATDKGVPPMTSRALLEINLLDVNDNAPVF---EQEFFNVT 374

Query: 154 IPLADLTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSIN-DSGHISIVDLSALNTS 210
           I + ++T  S I ++ A D D G   +V  S+       FSI+ ++G I +       ++
Sbjct: 375 I-MENITIPSNILQIRATDSDSGQNGKVHYSIVASSVNGFSIDYENGWIKLYQKVDSRSN 433

Query: 211 TIQLVVVATDTGNPPRQASVPAIMH 235
            + L+V A D+G P + +++   +H
Sbjct: 434 PVALLVRAKDSGQPAQSSTINCAIH 458



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 39/143 (27%), Positives = 74/143 (51%), Gaps = 15/143 (10%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWL--SNDYGERFSISRQ-GDI 97
           +F+   Y+V+  E+ P       V     ++  +  + Y+L   N  G+ F + R  G +
Sbjct: 755 EFTSENYTVAIAEDTPTGTSFTQVAAVDIDEGDNAIIDYYLIEENGNGDTFKLDRSSGTL 814

Query: 98  SLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHI 154
            ++  LD E    Y  TV A D     +++ +TV+I +++VND+ P+F   +Y+L+    
Sbjct: 815 RVVSKLDREMIARYELTVKAQDRGNPPLSSFSTVSIIIIDVNDYAPQFESSRYDLW---- 870

Query: 155 PLADLTP-GSVIGKVEAADGDKG 176
            +A+ +P G+ +G + A D D+G
Sbjct: 871 -IAENSPIGTTVGTIIARDEDEG 892



 Score = 38.9 bits (89), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 63/255 (24%), Positives = 106/255 (41%), Gaps = 50/255 (19%)

Query: 13  LVVRAIQYDNQDRYALATLI--VSKAGTSLREL--------------------------Q 44
           + V+AI +DN D+ A+ +L   + +   +LR +                           
Sbjct: 595 ITVKAIDHDNDDKGAILSLSGEIDRTDDTLRVMIAATDKGGLTGTCTVTITVADVNTAPV 654

Query: 45  FSKNEYSVSALENLPV-NYVLLTVTTNKPRDLRVKYWLSNDYGERFSISRQ-GDISLMQC 102
           F  + ++V   EN+P+ + V+     ++ R    K   S D  E F I +  G I + + 
Sbjct: 655 FLIHPFTVHIPENIPIGSEVIQLKAEDQDRHENAKLTYSVDSKE-FKIDKNTGLIMIAKE 713

Query: 103 LDYETEDSYRFTVYATDTL---MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADL 159
           +D E   SY   +   D     ++ S  + I + ++ND  P F    Y      + +A+ 
Sbjct: 714 IDREERSSYLLNITVIDHATNPLSASTFLEIILNDINDNAPEFTSENYT-----VAIAED 768

Query: 160 TP-GSVIGKVEAADGDKGDRVTLSLRGPYEK----MFSIN-DSGHISIVDLSALNTSTI- 212
           TP G+   +V A D D+GD   +      E      F ++  SG + +V  S L+   I 
Sbjct: 769 TPTGTSFTQVAAVDIDEGDNAIIDYYLIEENGNGDTFKLDRSSGTLRVV--SKLDREMIA 826

Query: 213 --QLVVVATDTGNPP 225
             +L V A D GNPP
Sbjct: 827 RYELTVKAQDRGNPP 841


>gi|395504920|ref|XP_003756794.1| PREDICTED: protocadherin Fat 2 [Sarcophilus harrisii]
          Length = 4252

 Score = 61.6 bits (148), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 46/160 (28%), Positives = 78/160 (48%), Gaps = 15/160 (9%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGER---FSISRQ-GDISLM 100
            F +  Y+ +A+E  PVN+++  V+   P  L    W +   G+    F I    G + + 
Sbjct: 1246 FDEPHYNFAAMETDPVNHMVGMVSVEDPPGL---LWFNISGGDEDMDFDIEMTTGSMVIA 1302

Query: 101  QCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLT 160
            + LD   + SY  TV  TD   T +  V I ++++N   P+F   QYE+ +P     D  
Sbjct: 1303 RHLDSRRKASYNLTVEVTDGSRTITTQVFIHLISINQHRPQFLEAQYEVKVPQ----DTP 1358

Query: 161  PGSVIGKVEAADGDKGDRVTLSLRGPYE----KMFSINDS 196
            PG  + +V+A D DKG  +   ++G  +    K+F ++ S
Sbjct: 1359 PGLELLRVQATDQDKGKSLVYMIQGSVDARSSKLFQLDPS 1398



 Score = 61.2 bits (147), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 68/244 (27%), Positives = 103/244 (42%), Gaps = 33/244 (13%)

Query: 6    DFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQ--------------FSKNEYS 51
            DF   +  V   + Y++Q ++         A  S  E                F++  Y+
Sbjct: 2115 DFKTGVLTVTGPLDYESQTKHIFTVRATDTALGSFSEATVEVQVEDINDNPPIFTQLVYT 2174

Query: 52   VSALENLPVN---YVLLTVTTNKPRDLRVKYWLSNDYGER---FSISRQ-GDISLMQCLD 104
                E LP       LL    +  R+  V Y +  D  E    F I +  G++S  Q LD
Sbjct: 2175 ALVSEGLPAQTPVIKLLASDKDSGRNKDVSYSMVEDESEDSSFFQIDKSTGEMSTAQELD 2234

Query: 105  YETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTP 161
            YET+  +   V A D     ++  A V ++V +VND  P FR PQYE  +  +     + 
Sbjct: 2235 YETQQQFHVKVRAVDNGIPPLSAEALVIVNVSDVNDNPPAFRQPQYEANVSEL----ASC 2290

Query: 162  GSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIND-SGHISIVDLSALNTS-TIQLVV 216
            G ++ KV+A D D GD   L    L G  ++ F IN  SG IS+ +    +     +L V
Sbjct: 2291 GHLVIKVQALDPDSGDTTRLEYLILSGNEDRHFIINRTSGIISMFNFCRKHLDPAYRLRV 2350

Query: 217  VATD 220
             A+D
Sbjct: 2351 AASD 2354



 Score = 51.2 bits (121), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 58/197 (29%), Positives = 91/197 (46%), Gaps = 16/197 (8%)

Query: 44   QFSKNEYSVSALENL-PVNYVLLTVTTN---KPRDLRVKYWLS-NDYGERFSISRQGD-- 96
            QF+ + Y  S +EN  P  +V+   T +     ++ +V  +++  D   +F IS+  D  
Sbjct: 2802 QFASDVYKGSVIENGDPGEHVVTLRTLDADISEQNRQVTCYITEGDPLGQFDISQTADEW 2861

Query: 97   -ISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIP 155
             IS  + LD E    Y   V A+D     S  V + V+++ND  P+     Y   +P   
Sbjct: 2862 KISTKKILDREHIAKYLLKVTASDGKFQASIPVEVFVLDINDNSPQCTQILYSSKVPE-- 2919

Query: 156  LADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIND-SGHI-SIVDLSALNTST 211
              D+ PG  I +V A D D G   +VT SL GP    F ++  +G + +++ L+      
Sbjct: 2920 --DMLPGHFILQVTATDLDAGVNAQVTYSLHGPGADEFKLDPYTGELTTLMPLNREEKDV 2977

Query: 212  IQLVVVATDTGNPPRQA 228
              LV  ATD G    QA
Sbjct: 2978 YHLVAKATDGGGRSCQA 2994



 Score = 48.5 bits (114), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 46/152 (30%), Positives = 73/152 (48%), Gaps = 31/152 (20%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPR---DLRVKYWLSNDYG----ERFSI-SRQGD 96
            F  + Y     EN+PV   ++ VT N      +  V Y L+ + G    E F+I S  G 
Sbjct: 2694 FEADPYKAFLTENMPVGTTVIQVTANDQDTGVNGEVTYSLAFEQGNAAAELFAINSENGW 2753

Query: 97   ISLMQCLDYETEDSYRFTVYATD----TLMTTSATVNISVVNVNDWDPRFRYPQYELFLP 152
            I+  Q LD E +++YRF V A+D      +++ A V +++ + ND  P+F          
Sbjct: 2754 ITTRQELDCEIQETYRFYVVASDHGRTIQLSSQALVEVTITDENDNAPQFA--------- 2804

Query: 153  HIPLADLTPGSVIGKVEAADGDKGDRVTLSLR 184
                +D+  GSVI      +GD G+ V ++LR
Sbjct: 2805 ----SDVYKGSVI-----ENGDPGEHV-VTLR 2826



 Score = 48.5 bits (114), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 45/136 (33%), Positives = 64/136 (47%), Gaps = 16/136 (11%)

Query: 102  CLDYETEDSYRFTVYATDTL---MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLAD 158
              D E +D+Y   V   D         ATV +S+ +VND  P F +  Y     +  + D
Sbjct: 1923 AFDREQQDTYEVAVEVRDDRHPPRVAQATVKVSIEDVNDNPPEFNHLPY-----YTAIQD 1977

Query: 159  LT-PGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDS--GHISI---VDLSALNTSTI 212
             T PG V+ +V A D D GD  T++     + ++   D   G IS+    D  ALN  T+
Sbjct: 1978 GTEPGDVLFQVSATDLDLGDNGTITYAFAEDYVYFWIDPYLGDISLKKPFDYQALNKYTL 2037

Query: 213  QLVVVATDTGNPPRQA 228
            +  V+A D GNP  QA
Sbjct: 2038 R--VIARDGGNPSLQA 2051



 Score = 47.8 bits (112), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 59/237 (24%), Positives = 99/237 (41%), Gaps = 15/237 (6%)

Query: 9    QPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVT 68
            Q   + VRA+        A A +IV+ +  +     F + +Y  +  E     ++++ V 
Sbjct: 2239 QQFHVKVRAVDNGIPPLSAEALVIVNVSDVNDNPPAFRQPQYEANVSELASCGHLVIKVQ 2298

Query: 69   TNKPRD---LRVKYW-LSNDYGERFSISR-QGDISLMQCLDYETEDSYRFTVYATDTLMT 123
               P      R++Y  LS +    F I+R  G IS+        + +YR  V A+D +  
Sbjct: 2299 ALDPDSGDTTRLEYLILSGNEDRHFIINRTSGIISMFNFCRKHLDPAYRLRVAASDGVFR 2358

Query: 124  TSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS- 182
            T+  V I+  N N + P FR   YE+ L      +   G+ + ++ A D D G   T+  
Sbjct: 2359 TAVPVYINTTNANKYSPEFRQHIYEVELAE----NAEIGTKVIELLAVDPDDGPYGTIDY 2414

Query: 183  --LRGPYEKMFSINDSGHISI---VDLSALNTSTIQLVVVATDTGNPPRQASVPAIM 234
              +     + FSIN  G I+    +D        + + V+A D G      SV  I+
Sbjct: 2415 TIINKLASEKFSINSRGQITTLQKLDRENATEKFMPIKVMARDGGGKVAFCSVKTIL 2471



 Score = 47.0 bits (110), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 57/184 (30%), Positives = 88/184 (47%), Gaps = 28/184 (15%)

Query: 52   VSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGERFSISRQ-GDISLMQCLDYETEDS 110
            V A+   P+ Y L+  TT +          SN  G  FS+ ++ G + + + +DYET   
Sbjct: 2610 VKAVAEDPIIYSLVKGTTPE----------SNKDG-VFSLDQETGALKVRKPIDYETTKW 2658

Query: 111  YRFTVYAT----DTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIG 166
            Y+  V A     +T + T A+VNI V +VND  P F    Y+ FL      ++  G+ + 
Sbjct: 2659 YQIDVMANCSHKETGLITLASVNIQVKDVNDNKPVFEADPYKAFL----TENMPVGTTVI 2714

Query: 167  KVEAADGDKG--DRVTLSLR----GPYEKMFSIN-DSGHISI-VDLSALNTSTIQLVVVA 218
            +V A D D G    VT SL         ++F+IN ++G I+   +L      T +  VVA
Sbjct: 2715 QVTANDQDTGVNGEVTYSLAFEQGNAAAELFAINSENGWITTRQELDCEIQETYRFYVVA 2774

Query: 219  TDTG 222
            +D G
Sbjct: 2775 SDHG 2778



 Score = 45.4 bits (106), Expect = 0.051,   Method: Compositional matrix adjust.
 Identities = 63/259 (24%), Positives = 113/259 (43%), Gaps = 44/259 (16%)

Query: 6    DFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRE---------------LQFSKNEY 50
            D+   I  V  ++ ++    Y L+   + K+  SL +                +F ++ Y
Sbjct: 3164 DYHTGILYVNGSLDFETGQEYYLSIECIRKSSPSLNDGTIVVVNITDVNDHPPKFLQDLY 3223

Query: 51   SVSALENLPVNYVLLTVTT---NKPRDLRVKYWL-SNDYGERFSIS-RQGDISLMQCLDY 105
            SV   E+  V   +LTV+    + P +  + Y L + D    F+I  ++G++ + + LD+
Sbjct: 3224 SVEVKEDAAVGESILTVSATDGDGPLNSAITYSLVAGDRLGHFTIHPKKGELQIAKHLDW 3283

Query: 106  ETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFL-PHIPLADLTP 161
            E   SY  T+ ATD+    +     V++ V +VND  PRF    Y + +  + PL     
Sbjct: 3284 EETSSYFLTLRATDSGQPALYQDVEVDVQVADVNDNPPRFFQLNYSIVVQENAPL----- 3338

Query: 162  GSVIGKVEAADGDKGD-------RVTLSLRGPYEKMFSINDSGHISIVDLSALNTSTIQ- 213
            GS + ++  +D D          R+T    G     F + + G   +V  +ALN    + 
Sbjct: 3339 GSRVLELILSDQDSPKNGPPYSFRITEGNDG---SAFRVTEDGW--LVTAAALNRRFKEQ 3393

Query: 214  --LVVVATDTGNPPRQASV 230
              L +  +D+G PP  +S 
Sbjct: 3394 YLLQIQVSDSGVPPLSSSA 3412



 Score = 40.4 bits (93), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 57/186 (30%), Positives = 86/186 (46%), Gaps = 21/186 (11%)

Query: 56   ENLPVNYVLLTVTTNKPRDL----RVKYWLSNDYGERFSIS-RQGDISLMQCLDYETEDS 110
            E+LP+  VL  +    P DL     VKY L +D    F +    G +SL + LD+E    
Sbjct: 932  EDLPLGTVLTFLEAFDP-DLGPGGEVKYTLMDDAQGTFGLDPLTGALSLERELDFEKRTW 990

Query: 111  YRFTVYATD----TLMTTSATVNISVVNVND--WDPRFRYPQYELFLPHIPLADLTPGSV 164
            Y  +++A+D         S  V ++V++VN+    PRF    Y+  +    L    PG++
Sbjct: 991  YNLSLWASDGGKPIARGASCHVQVTVLDVNENLHPPRFASFVYQGQVEENSL----PGTL 1046

Query: 165  IGKVEAADGDKGDR--VTLSLR-GPYEKMFSIN-DSGHI-SIVDLSALNTSTIQLVVVAT 219
            +  V A D D G    +   LR G     FSI+ D+G I +I+ L         L V+A 
Sbjct: 1047 VLSVTAQDVDLGQDGVIQYFLRDGTDLATFSIDRDTGMIQTIMPLDREFIPHYWLTVLAV 1106

Query: 220  DTGNPP 225
            D G+ P
Sbjct: 1107 DQGSVP 1112


>gi|301753515|ref|XP_002912644.1| PREDICTED: protocadherin gamma-A2-like [Ailuropoda melanoleuca]
          Length = 773

 Score = 61.6 bits (148), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 55/193 (28%), Positives = 88/193 (45%), Gaps = 17/193 (8%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVT---TNKPRDLRVKYWLSNDYGERFSI----SRQGDI 97
           F++ EY VS  EN+PV   +LTVT   T++  + +V Y+   + GE   +    S  GDI
Sbjct: 242 FTQPEYRVSVPENMPVGTRILTVTATDTDEGYNAQVTYFQEKNPGETSEVFELESTSGDI 301

Query: 98  SLMQCLDYETEDSYRFTVYATDTL-MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
           ++ + LD+E  + +   + A D   + T   V ++V++VND  P F        +P    
Sbjct: 302 TITKSLDFEDAEVHEIDIEAQDGPGLLTRTKVIVTVLDVNDNAPEFYMTSATSSIPE--- 358

Query: 157 ADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDS--GHISIVDLSALNT---ST 211
            D  PG++I      D D G    ++   P    F +  S   +  +V   AL+    S 
Sbjct: 359 -DCPPGTIIALFNVHDRDSGQNAFITCSLPENLPFKLERSVDNYHRLVTTRALDREQFSF 417

Query: 212 IQLVVVATDTGNP 224
             + V A D G P
Sbjct: 418 YNVTVTAKDGGKP 430



 Score = 44.7 bits (104), Expect = 0.078,   Method: Compositional matrix adjust.
 Identities = 51/177 (28%), Positives = 75/177 (42%), Gaps = 25/177 (14%)

Query: 67  VTTNKPRDLRVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDT---LMT 123
           +T + P +L  K   S D   R   +R         LD E    Y  TV A D     ++
Sbjct: 382 ITCSLPENLPFKLERSVDNYHRLVTTR--------ALDREQFSFYNVTVTAKDGGKPSLS 433

Query: 124 TSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGD--RVTL 181
           T A + + V ++ND  P F +  Y  ++P     +   G+ I  VEA D D  D   +T 
Sbjct: 434 TEAYILLQVADINDNPPTFPHMSYSAYIPE----NNPRGASIISVEAHDPDSDDNAHITY 489

Query: 182 SLR------GPYEKMFSIN-DSGHI-SIVDLSALNTSTIQLVVVATDTGNPPRQASV 230
           SL        P     SIN D+G + ++          +QL + A D GNPP  ++V
Sbjct: 490 SLTEDTLQGAPLSSYISINSDTGIVYALRSFDYEQLQDLQLWLTAWDNGNPPLSSNV 546


>gi|291225882|ref|XP_002732927.1| PREDICTED: fat-like, partial [Saccoglossus kowalevskii]
          Length = 4229

 Score = 61.6 bits (148), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 52/146 (35%), Positives = 77/146 (52%), Gaps = 20/146 (13%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTT------NKPRDLRVKYWLSN-DYGERFSIS-RQGD 96
           F+ N YSV+ LE LP    +  +T       ++P D    YW+S  D   +FSI   QGD
Sbjct: 9   FANNTYSVTILEQLPSQSSIFQITATDLDFVSRPSDFV--YWISGGDEEGKFSIHPTQGD 66

Query: 97  ISLMQCLDYETEDS---YRFTVYATDTLMTT---SATVNISVVNVNDWDPRFRYPQYELF 150
           I ++  +D ++ ++   Y  TV  TD   TT   +ATV I+V+++ND DP+F    Y   
Sbjct: 67  IIVIGDIDSDSPNNNTFYNLTVSVTDRDSTTNNDTATVLITVIDINDNDPQFSEGSYS-- 124

Query: 151 LPHIPLADLTPGSVIGKVEAADGDKG 176
            P    AD+T  + +G V A D D+G
Sbjct: 125 FPIDEDADIT--TFVGMVTATDKDEG 148



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 67/234 (28%), Positives = 107/234 (45%), Gaps = 16/234 (6%)

Query: 12   TLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVN-YVLLTVTTN 70
            T VV A+     +     +LI++    +     F+ + YS + LEN  ++ +V   + T+
Sbjct: 1944 TYVVSAVDGGLPNNTGTVSLIITILNENDETPVFNSDSYSFTILENAVIDTFVGRVMATD 2003

Query: 71   KPRDLRVKYWLSNDYGERFSI-SRQGDISLMQ--CLDYETEDSYRFTVYATDTLMTTSAT 127
               D  +  +  N     F I S  GDI + +   LD ET D+YR  V A D L   +AT
Sbjct: 2004 ADGDTII--YTVNPTDVPFVIDSETGDIIVSESGVLDRETWDNYRLIVTAFDGLHDVNAT 2061

Query: 128  VNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLS-LR 184
            V++ +++ ND  P F   +Y   +      D   G  I +V A D D+G    VT S + 
Sbjct: 2062 VDVHLLDENDNTPEFPPNEYSGNMTE----DEMTGFTILQVVALDEDEGMNSNVTFSIIT 2117

Query: 185  GPYEKMFSINDSGHISIVDLSALNTST---IQLVVVATDTGNPPRQASVPAIMH 235
            G +   F I D G + + + S ++ +      L V ATD G  PR +    I++
Sbjct: 2118 GNHGNAFGIMDDGSVFLANSSVIDIANYVQYSLTVQATDGGEFPRSSITMVIIN 2171



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 43/139 (30%), Positives = 71/139 (51%), Gaps = 8/139 (5%)

Query: 95   GDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHI 154
            G+IS    LD ET +S+   V  +D L      +N++V++VND +P F   +Y+  +  I
Sbjct: 2233 GEISTSDTLDRETTESWLLNVSCSDGLYEDYTIINVTVLDVNDNEPEFLEGEYKKTISEI 2292

Query: 155  PLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSIN-DSGHISIVDLSALNTSTIQ 213
                   G+VI  V A D D+ + +   L     K F++N  +G I++  +       IQ
Sbjct: 2293 ----FPVGNVILTVSATDADEMNEMVYFLEDSNSK-FAVNYQTGAITLQQIITGFDFGIQ 2347

Query: 214  --LVVVATDTGNPPRQASV 230
                V A D+G+PP+++SV
Sbjct: 2348 HTFSVKARDSGSPPKESSV 2366



 Score = 48.5 bits (114), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 57/203 (28%), Positives = 93/203 (45%), Gaps = 17/203 (8%)

Query: 30  TLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGERF 89
           ++++S   T+  E  FS + Y+ +A EN      +  V    P    + Y++       F
Sbjct: 738 SIVISINNTNDEEPAFSVSTYNFTAYENSRQGTPVGKVEATDPDHDILSYFIITS-ASLF 796

Query: 90  SISRQ-GDISLM--QCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQ 146
           ++    G I ++    LD E +DSY   V ATD + +TS  + I++++ ND  P F    
Sbjct: 797 TVDENSGQIIVLVSGSLDREVQDSYNVVVIATDGVYSTSTNITIAILDENDNSPIFMKSG 856

Query: 147 YELFLPHIPLADLTPGSVIGKVEAADGDKGDRVT-----LSLRGPYEKMFSI-NDSGHIS 200
           Y   +      D+  GS I +V A D D GD        L+     + +F I N SG + 
Sbjct: 857 YYGNVTE----DVDIGSEILQVSAQDEDVGDNANVEYSILATSSNGDGIFGIHNSSGSLF 912

Query: 201 IVDLSALNTSTIQ---LVVVATD 220
           I+D   ++  T +   +VV ATD
Sbjct: 913 ILDNINVDYETTKSYVIVVQATD 935



 Score = 45.8 bits (107), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 54/203 (26%), Positives = 94/203 (46%), Gaps = 16/203 (7%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVT-TNKPRDLRVKYWLSNDYGER--FSISRQGDISLMQ 101
            F+++ Y+    E+   +  ++TV+ T+   +  + + L +D      F+I     +  + 
Sbjct: 2602 FTEDTYTADVPEDASADRSIITVSVTDNDWNNTITFSLQSDGNTNGAFTIDEMSGVVTLT 2661

Query: 102  ---CLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLAD 158
                LD    D Y  TV A D L T  AT+ I+V+ +N ++P F   Q   ++  I   D
Sbjct: 2662 GDGILDVRDNDFYNLTVEADDGLNTNQATILITVLEINLYNPVFN--QSLGYVYSINEND 2719

Query: 159  LTPGSV----IGKVEAADGDKGDRVTLSL-RGPYEKMFSINDSGHISIVD-LSALNTSTI 212
              PG++    +G V A D D GD +  S+  G  + +F I+++G IS    L+  +    
Sbjct: 2720 Y-PGALSVVTVGSVWATD-DDGDAIIYSIFAGNQDGIFVIDENGQISTNGTLNREDQDVY 2777

Query: 213  QLVVVATDTGNPPRQASVPAIMH 235
             L + A D    PR   V  I++
Sbjct: 2778 SLTIAAMDDRTSPRLGLVEVIVN 2800



 Score = 45.4 bits (106), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 50/188 (26%), Positives = 86/188 (45%), Gaps = 13/188 (6%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGERFSISRQ-GDISLMQCL 103
            F  + YS +  EN   +  +  V+     D  + Y++ +     FSI    G I ++  L
Sbjct: 1301 FLSSNYSFTVYENSRSDTSVGKVSAMDSDDDVLSYFILDTV--PFSIDEDTGVIKVISSL 1358

Query: 104  DYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGS 163
            D E  DSY   V  TD + + SA   I++++ ND  P F    Y   +      D+  G 
Sbjct: 1359 DRENVDSYNVVVMVTDGVYSASANATIAILDENDNSPIFMKSTYYGNVTE----DVDIGM 1414

Query: 164  VIGKVEAADGDKG-----DRVTLSLRGPYEKMFSIN-DSGHISIVDLSALNTSTIQLVVV 217
             I +VEA+D D G     D   L+  G  + +F I+ ++G I I++ + L+   + + V+
Sbjct: 1415 EILQVEASDVDLGGNADVDYSILAASGNGDSIFGIHGNNGSIFILNNTGLDFELMNIYVI 1474

Query: 218  ATDTGNPP 225
            +    + P
Sbjct: 1475 SVQATDHP 1482



 Score = 43.9 bits (102), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 44/139 (31%), Positives = 64/139 (46%), Gaps = 14/139 (10%)

Query: 45  FSKNEYSVSALENLPV-NYVLLTVTTNKPRDLR---VKYWLSNDYGERFSISR-QGDISL 99
           FS+  Y  +A E + V   V +   T+K        V Y + +  G  F I    G+IS+
Sbjct: 648 FSQETYRFTADEGVAVATSVGMVTATDKDEGTNGEVVSYAIMDGDG-TFGIDETSGEISV 706

Query: 100 MQCLDYETED-SYRFTVYATDTLM---TTSATVNISVVNVNDWDPRFRYPQYELFLPHIP 155
            + LD+E  D  +RFTV A D  +     S ++ IS+ N ND +P F    Y        
Sbjct: 707 NRSLDFENGDKEFRFTVVAHDGGLPQQNGSVSIVISINNTNDEEPAFSVSTYNF----TA 762

Query: 156 LADLTPGSVIGKVEAADGD 174
             +   G+ +GKVEA D D
Sbjct: 763 YENSRQGTPVGKVEATDPD 781



 Score = 43.9 bits (102), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 59/207 (28%), Positives = 99/207 (47%), Gaps = 25/207 (12%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDLR--VKYWLSNDYGER-FSISRQGDISLMQ 101
            F    Y++S  E+  +   +L VT      +     YW+SN   +  F I+  GDI ++ 
Sbjct: 1091 FENATYTISIPEDTELRSPILRVTATDMDTITSYFIYWISNGNNDGIFDINEDGDIIVIG 1150

Query: 102  CLDYETEDSYRF---TVYATDTLMTT---SATVNISVVNVNDWDPRFRYPQYELFLPHIP 155
             +D +   +Y F   TV  +D    T   +  V I++ +VND  P F   +Y +F+ +  
Sbjct: 1151 DIDRDPPYNYTFFNLTVTVSDGDSNTNNDTTNVQITISDVNDNSPVFEKVEY-IFMVN-- 1207

Query: 156  LADLTPGSVIGKVEAADGDKGDRVTL----SLRGPYEKMFSIND-SGHI---SIVDLSAL 207
              + T G+++G V A D D G    +     + G  +  FS+N+ +G++   S++D S L
Sbjct: 1208 -ENSTVGTIVGSVHATDIDDGSNGEILSYDIING--DDTFSMNNQTGNLMLTSVLDPS-L 1263

Query: 208  NTSTIQLVVVATDTGNPPRQASVPAIM 234
            N S   L V A D G+ P+  S   I+
Sbjct: 1264 N-SKFTLTVSAMDGGSIPKTGSTVIIV 1289



 Score = 43.9 bits (102), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 45/198 (22%), Positives = 90/198 (45%), Gaps = 12/198 (6%)

Query: 21   DNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYW 80
            D++ R ++AT+ +S    +     F ++EY     E + +   ++ +       + V  +
Sbjct: 1484 DSESRSSVATVYISIEDMNDEMPLFGQSEYVAYINEEVTIATSVIQIQATDEDTVGVLAY 1543

Query: 81   LSNDYGERFSISRQGDI-SLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWD 139
              +D    F+I  +  I S  + LD E+ D Y  T+  TD   + +  + + + + ND  
Sbjct: 1544 SVHDDSSTFTIHNESAIVSTTELLDRESHDKYVVTISVTDGKFSNNVNLTVYIEDTND-- 1601

Query: 140  PRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGD---KGDRVTLSLRGPYEKMFSINDS 196
                 PQ+++ L    +++   G+ +G V A D D     D +     G +   F I++S
Sbjct: 1602 ---NSPQFDISLYIFNISEGINGTNVGTVHATDADLSPNDDVMYYISSGNHGNHFDIDNS 1658

Query: 197  -GHISIVDLSALNTSTIQ 213
             G +S++  SA++  T Q
Sbjct: 1659 TGGLSVI--SAIDVETEQ 1674



 Score = 39.7 bits (91), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 76/152 (50%), Gaps = 17/152 (11%)

Query: 78   KYWLSNDYGERFSISR-QGDISLMQCLDYETED-SYRFTVYATDTLM---TTSATVNISV 132
            +Y L  D  + FSI    G+ISL+  LDYE+ D  + + V A D  +   T + ++ I++
Sbjct: 1910 RYSLDGD--DVFSIDDISGNISLVDRLDYESGDVQFTYVVSAVDGGLPNNTGTVSLIITI 1967

Query: 133  VNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFS 192
            +N ND  P F    Y   +    + D    + +G+V A D D GD +  ++  P +  F 
Sbjct: 1968 LNENDETPVFNSDSYSFTILENAVID----TFVGRVMATDAD-GDTIIYTVN-PTDVPFV 2021

Query: 193  IN-DSGHISIVDLSALNTST---IQLVVVATD 220
            I+ ++G I + +   L+  T    +L+V A D
Sbjct: 2022 IDSETGDIIVSESGVLDRETWDNYRLIVTAFD 2053



 Score = 39.3 bits (90), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 58/212 (27%), Positives = 94/212 (44%), Gaps = 23/212 (10%)

Query: 27  ALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNK-----PRDLRVKYWL 81
           A +T+ V+    +    +F K+ Y  +  EN   N  +L V  +        D+      
Sbjct: 303 ATSTVTVAILDENDNSPKFEKSVYYGNVTENTFSNATILQVLADDLDIGANADIIYSILA 362

Query: 82  SNDYGE-RFSI-SRQGDISLMQC--LDYETEDSYRFTVYATD--TLMT----TSATVNIS 131
           ++ +G+ RFSI    GDIS+     LDYE   SY  TV A D  T+ T    +  TV I 
Sbjct: 363 TSSHGDDRFSIDGDSGDISVQSNADLDYELVSSYVITVQAVDNPTMDTQQRSSVVTVYID 422

Query: 132 VVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGD---KGDRVTLSLRGPYE 188
           ++++ND  P F    Y  ++      D    SVI +++A D D     D +     G + 
Sbjct: 423 IIDINDVMPEFADSSYVAYVNEAVAMDT---SVI-QIQATDADLSPNDDVMYYISSGNHG 478

Query: 189 KMFSINDS-GHISIVDLSALNTSTIQLVVVAT 219
             F I++S G +S++    + T   Q ++  T
Sbjct: 479 NHFDIDNSTGGLSVISAIDVETEQSQFIIEIT 510


>gi|119625021|gb|EAX04616.1| FAT tumor suppressor homolog 1 (Drosophila), isoform CRA_c [Homo
            sapiens]
          Length = 2228

 Score = 61.6 bits (148), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 65/227 (28%), Positives = 107/227 (47%), Gaps = 25/227 (11%)

Query: 33   VSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTV-TTNKPRDL--RVKYWLSNDYG-ER 88
            V+  G +L    F +NEY V   EN P++ +++ V TT+    +   V Y + ND+  +R
Sbjct: 870  VTVIGGNLHSPAFLQNEYEVELAENAPLHTLVMEVKTTDGDSGIYGHVTYHIVNDFAKDR 929

Query: 89   FSISRQGDISLMQCLDYET--EDSYRFTVYATDTLMTTS-ATVNISVVNVNDWDPRFRYP 145
            F I+ +G I  ++ LD ET  E      + A D     +  TVN+ + + ND  P+FR  
Sbjct: 930  FYINERGQIFTLEKLDRETPAEKVISVRLMAKDAGGKVAFCTVNVILTDDNDNAPQFRAT 989

Query: 146  QYELFLPHIPLADLTPGSVIGKVEAADGDKGDR--VTLSLRGPYEKM---FSIND-SGHI 199
            +YE+ +     +    G+ + KV A+D D+G    +T ++    E +     IN  SG I
Sbjct: 990  KYEVNIG----SSAAKGTSVVKVLASDADEGSNADITYAIEADSESVKENLEINKLSGVI 1045

Query: 200  SIVD-LSALNTSTIQLVVVATDTGNPPRQASV-------PAIMHFPE 238
            +  + L  L        V A D G+P +++ V       P  M  P+
Sbjct: 1046 TTKESLIGLENEFFTFFVRAVDNGSPSKESVVLVYVKILPPEMQLPK 1092



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 59/244 (24%), Positives = 106/244 (43%), Gaps = 40/244 (16%)

Query: 4    EDDFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYV 63
            E++F    T  VRA+   +  + ++  + V      ++  +FS+  Y+ +  E++P+   
Sbjct: 1055 ENEFF---TFFVRAVDNGSPSKESVVLVYVKILPPEMQLPKFSEPFYTFTVSEDVPIGTE 1111

Query: 64   LLTVTTNKPRDLRVKYWLSN----DYGERFSISRQ-GDISLMQCLDYETEDSYRFTVYAT 118
            +  +       +       N    +  E F I RQ G + L + LD+ET   Y+F++ A 
Sbjct: 1112 IDLIRAEHSGTVLYSLVKGNTPESNRDESFVIDRQSGRLKLEKSLDHETTKWYQFSILAR 1171

Query: 119  ----DTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGD 174
                D  M  S  V+I V + ND  P F    YE F+    + +L  GS + ++ A+D D
Sbjct: 1172 CTQDDHEMVASVDVSIQVKDANDNSPVFESSPYEAFI----VENLPGGSRVIQIRASDAD 1227

Query: 175  KGDRVTLSLRGPYEKMFSINDSGHISIVDLSALNTST----------------IQLVVVA 218
             G    +        M+S++ S  + +++  A+N  T                 Q+ VVA
Sbjct: 1228 SGTNGQV--------MYSLDQSQSVEVIESFAINMETGWITTLKELDHEKRDNYQIKVVA 1279

Query: 219  TDTG 222
            +D G
Sbjct: 1280 SDHG 1283



 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 62/215 (28%), Positives = 102/215 (47%), Gaps = 21/215 (9%)

Query: 27   ALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLS---- 82
            A  T+IVS    +     F   EY  +  E++ V   +L V     RD+     ++    
Sbjct: 1602 ATGTVIVSVLDINDNPPVFEYREYGATVSEDILVGTEVLQVYA-ASRDIEANAEITYSII 1660

Query: 83   --NDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVN 136
              N++G +FSI S+ G + +++ LDYE+   Y  TV ATD     ++  ATVN++V ++N
Sbjct: 1661 SGNEHG-KFSIDSKTGAVFIIENLDYESSHEYYLTVEATDGGTPSLSDVATVNVNVTDIN 1719

Query: 137  DWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS-LRGPYEKMFSIND 195
            D  P F    Y   +    + + +  +V+   + ADG     +  S + G     F+I+ 
Sbjct: 1720 DNTPVFSQDTYTTVISEDAVLEQSVITVMA--DDADGPSNSHIHYSIIDGNQGSSFTIDP 1777

Query: 196  -SGHISIVDLSALNTSTIQ---LVVVATDTGNPPR 226
              G + +  L  L+  TI    L V A+D G+PPR
Sbjct: 1778 VRGEVKVTKL--LDRETISGYTLTVQASDNGSPPR 1810



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 42/145 (28%), Positives = 68/145 (46%), Gaps = 8/145 (5%)

Query: 90   SISRQGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYEL 149
            +I  +  + + + LD E  D+Y  T+ ATD   ++ A V + V++ ND  P      Y  
Sbjct: 1361 TIQNEWKVYVKKPLDREKRDNYLLTITATDGTFSSKAIVEVKVLDANDNSPVCEKTLYSD 1420

Query: 150  FLPHIPLADLTPGSVIGKVEAADGD--KGDRVTLSLRGPYEKMFSIN-DSGHISI-VDLS 205
             +P     D+ PG +I ++ A D D      +T +L G   + F +N D+G +     L 
Sbjct: 1421 TIPE----DVLPGKLIMQISATDADIRSNAEITYTLLGSGAEKFKLNPDTGELKTSTPLD 1476

Query: 206  ALNTSTIQLVVVATDTGNPPRQASV 230
                +   L+V ATD G    QAS+
Sbjct: 1477 REEQAVYHLLVRATDGGGRFCQASI 1501



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 61/225 (27%), Positives = 107/225 (47%), Gaps = 19/225 (8%)

Query: 13   LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKP 72
            L+VRA   D   R+  A+++++    +    +FS + Y+++  EN     +L  V     
Sbjct: 1485 LLVRAT--DGGGRFCQASIVLTLEDVNDNAPEFSADPYAITVFENTEPGTLLTRVQATDA 1542

Query: 73   R---DLRVKYWLSNDYGERFSISR-QGDISLMQCLDYETEDSYRFTVYATDT----LMTT 124
                + ++ Y L +    +FSI+   G I L + LD E +  Y  ++ A D      +T 
Sbjct: 1543 DAGLNRKILYSLIDSADGQFSINELSGIIQLEKPLDRELQAVYTLSLKAVDQGLPRRLTA 1602

Query: 125  SATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAA--DGDKGDRVTLS 182
            + TV +SV+++ND  P F Y +Y   +      D+  G+ + +V AA  D +    +T S
Sbjct: 1603 TGTVIVSVLDINDNPPVFEYREYGATVSE----DILVGTEVLQVYAASRDIEANAEITYS 1658

Query: 183  -LRGPYEKMFSIND-SGHISIVD-LSALNTSTIQLVVVATDTGNP 224
             + G     FSI+  +G + I++ L   ++    L V ATD G P
Sbjct: 1659 IISGNEHGKFSIDSKTGAVFIIENLDYESSHEYYLTVEATDGGTP 1703



 Score = 51.6 bits (122), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 77/162 (47%), Gaps = 21/162 (12%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSN-DYGERFSIS-RQGDISLMQC 102
           F K  YS    E++ V+  ++ V  N P  L+V Y +++ D   +F+I+   G I+++  
Sbjct: 572 FEKPFYSAEIAESIQVHSPVVHVQANSPEGLKVFYSITDGDPFSQFTINFNTGVINVIAP 631

Query: 103 LDYETEDSYRFTVYATDTLMTTSATVNISVV--NVNDWDPRFRYPQYELFLPHIPLADLT 160
           LD+E   +Y+ ++ ATD+L    A V + ++  ++ND  P F    Y +         L+
Sbjct: 632 LDFEAHPAYKLSIRATDSLTGAHAEVFVDIIVDDINDNPPVFAQQSYAV--------TLS 683

Query: 161 PGSVIG----KVEAADGDKGDRVTLSLRGPYEKMFSINDSGH 198
             SVIG    +V A D D         RG   +MF  +   H
Sbjct: 684 EASVIGTSVVQVRATDSDSEPN-----RGISYQMFGNHSKSH 720



 Score = 38.1 bits (87), Expect = 6.4,   Method: Compositional matrix adjust.
 Identities = 42/162 (25%), Positives = 72/162 (44%), Gaps = 14/162 (8%)

Query: 45   FSKNEYSVSALENLPVNY-VLLTVTTNKPRDLRVKYWL-----SNDYGERFSISRQGDIS 98
            FS+  YSV   EN PV + VL  V T++        +       ND  + F ++ QG + 
Sbjct: 1830 FSRGNYSVIIQENKPVGFSVLQLVVTDEDSSHNGPPFFFTIVTGNDE-KAFEVNPQGVLL 1888

Query: 99   LMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIP 155
                +  + +D Y   V   D     +++   ++I V+  + + P       E+F+    
Sbjct: 1889 TSSAIKRKEKDHYLLQVKVADNGKPQLSSLTYIDIRVIEESIYPPAIL--PLEIFI--TA 1944

Query: 156  LADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSG 197
              +   G VIGK+ A D D  D +T SL    + +FS++ +G
Sbjct: 1945 SGEEYSGGVIGKIHATDQDVYDTLTYSLDPQMDNLFSVSSTG 1986



 Score = 37.7 bits (86), Expect = 8.5,   Method: Compositional matrix adjust.
 Identities = 40/129 (31%), Positives = 57/129 (44%), Gaps = 14/129 (10%)

Query: 92  SRQGDISLMQCLDYETEDSYRFTVYATDTLMTTSAT---VNISVVNVNDWDPRFRYPQYE 148
           S  G ISL++ LDYE    +   V A D  M T ++   V + V ++ND  P F    YE
Sbjct: 727 SSTGLISLLRTLDYEQSRQHTIFVRAVDGGMPTLSSDVIVTVDVTDLNDNPPLFEQQIYE 786

Query: 149 LFL-PHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSINDSGHISIVDL 204
             +  H P      G  +  V+A D D  D   L    L G   K F I+ +    I+ L
Sbjct: 787 ARISEHAP-----HGHFVTCVKAYDADSSDIDKLQYSILSGNDHKHFVIDSA--TGIITL 839

Query: 205 SALNTSTIQ 213
           S L+   ++
Sbjct: 840 SNLHRHALK 848


>gi|118087518|ref|XP_419273.2| PREDICTED: protocadherin Fat 4-like [Gallus gallus]
          Length = 2498

 Score = 61.6 bits (148), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 60/197 (30%), Positives = 96/197 (48%), Gaps = 15/197 (7%)

Query: 43   LQFSKNEYSVSALENLPVNYVLLTVTT-NKPRDLRVKYWLSNDYGERFSISRQGDISLMQ 101
            L F  + Y  +  E  PV  V+ +V        ++V Y+L + + ++F+IS QGDI  + 
Sbjct: 1167 LAFESSRYEFNIPEEEPVRTVVGSVKALTGSIAIQVVYFLRS-HTDKFAISDQGDIVTLA 1225

Query: 102  CLDYETEDSYRFTVYATDTLM---TTSATVNISVVNVNDWDPRF-RYPQYELFLPHIPLA 157
             LD E ++ Y   V A D+++   T  A V + V ++ND  P F    Q +L LP     
Sbjct: 1226 TLDREDDNLYNIVVEAVDSVVPPNTAIALVTVIVNDINDNPPVFSELIQTKLSLPE---- 1281

Query: 158  DLTPGSVIGKVEAADGDKGDRVTLS--LRGPYEKMFSINDSGH--ISIVDLSALNTSTIQ 213
            ++ P   +G   A D D GD   +S  L+  +  MF IN S    ++ + L        +
Sbjct: 1282 NMAPLD-LGTFSATDLDIGDNAFISYYLQYDFAGMFHINTSTGKLMTGMSLDREMMDNYE 1340

Query: 214  LVVVATDTGNPPRQASV 230
            L ++A D+G PP  AS+
Sbjct: 1341 LKIIAIDSGKPPLSASL 1357



 Score = 60.8 bits (146), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 58/197 (29%), Positives = 97/197 (49%), Gaps = 19/197 (9%)

Query: 44   QFSKNEYSVSALEN---LPVNYVLLTVTT---NKPRDLRVKYWLSNDYGER-FSISRQGD 96
            +F    YS + LE    L    V+  VT    ++  + R+ Y+LS++ G+  + I + G 
Sbjct: 955  EFQMQSYSFAVLEGDYRLGAPAVVGHVTATDLDEGENARITYYLSSEDGDNPYDIQQDGT 1014

Query: 97   ISLMQCLDYETEDSYRFTVYATDTLMTTSAT---VNISVVNVNDWDPRFRYPQYELFLPH 153
            I +  C+D ET++ Y   + A+D  M        ++I V++VND  P+F    Y      
Sbjct: 1015 ILVNGCVDRETKEKYELLLVASDNGMPRRQNFTYISIQVLDVNDNVPQFTKVHYA---AS 1071

Query: 154  IPLADLTPGSVIGKVEAADGDKGDR--VTLSLRGPYEKMFSIND-SGHISIVDLSALNTS 210
            IP+A    G+ +  V A D D G+   ++ SL   +  +F IN+ +G I ++   A  T+
Sbjct: 1072 IPVATAKEGAFVLSVSATDLDIGNNSVISYSLMN-HSDIFHINNHTGEIILLSSLAHVTA 1130

Query: 211  --TIQLVVVATDTGNPP 225
               + L V+A D G PP
Sbjct: 1131 DMVVTLTVIAADHGVPP 1147



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 66/240 (27%), Positives = 103/240 (42%), Gaps = 37/240 (15%)

Query: 15  VRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRD 74
           + A Q DN  + A A ++V+    +      S++ Y+VS LEN P          N    
Sbjct: 309 IEAAQQDNNLKTADAVVLVTIEDVNDNLPVLSQSSYNVSILENFP----------NGKEV 358

Query: 75  LRVKYWLSNDYGER-----------FSISRQGDISLMQC--LDYETEDSYRFTVYATDTL 121
           LR++    ++ G +           F IS+ G +++     LD E   S    V A D L
Sbjct: 359 LRIEAVDKDEGGFQGTFSLTPADSPFQISQDGILTVRNSTLLDREQTPSIHLQVTARDHL 418

Query: 122 M---TTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDR 178
                  + +N+ +++ ND +P F   QYE     +   ++T G  I +V A D D G  
Sbjct: 419 SPYDEAQSAINVLLLDENDNNPTFTDTQYE----QVIFINMTAGMSILQVAADDPDDGIN 474

Query: 179 VTLSL---RGPYEKMFSINDS-GHIS---IVDLSALNTSTIQLVVVATDTGNPPRQASVP 231
             +S     G  +  F ++ S G IS   ++ L    +    L V ATD G  PR +SVP
Sbjct: 475 GAISFVLAGGNEDGYFELDKSTGQISLKAVIPLRVNESKNFVLWVTATDGGTNPRSSSVP 534



 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 59/201 (29%), Positives = 98/201 (48%), Gaps = 24/201 (11%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKP--RDLRVKYWLSNDYGE-RFSISR-QGDISLM 100
             S+  YSV+  EN P + +L T  T+K    +  ++Y +    GE  F +    G+IS +
Sbjct: 1373 LSQKLYSVTVKENDPPHVILSTTATDKDIGYNAVIQYTI---IGETSFHVGELSGNISTV 1429

Query: 101  QCLDYETEDSYRFTVYA---TDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLA 157
            Q LDYE+   Y FT+ A    +  +  +  + + V +VN+  P F  P Y   L    L 
Sbjct: 1430 QPLDYESCAHYTFTLKAFNPGEPHLQDTTNITVIVEDVNEEGPMFDKPSYFQIL----LD 1485

Query: 158  DLTPGSVIGKVEAADGDKG--DRVTLSLR-GPYEKMFSIND-SGHISIVDLSALNTSTI- 212
            + T G+++  ++A D  KG  + +  ++  G  E +F+++  SG +++     LN     
Sbjct: 1486 NSTAGTLVVDIDARDESKGYDEGIFYNITDGNSEGLFNLSSTSGVLTLT--RDLNKQAFP 1543

Query: 213  ---QLVVVATDTGNPPRQASV 230
                L V ATD+G PP   SV
Sbjct: 1544 LYNSLTVTATDSGLPPLSTSV 1564



 Score = 46.6 bits (109), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 54/190 (28%), Positives = 82/190 (43%), Gaps = 12/190 (6%)

Query: 44  QFSKNEYSVSALENL--PVNYVLLTVTTNKPRDLRVKYWLSNDYGERFSISRQGDISLMQ 101
           QF +  Y+VS  E L  PV    +   +  P    +   L+      F +   G I    
Sbjct: 546 QFIQKTYNVSVEEELVSPVEVARVKYESLNPHIPVILRVLTE--SATFDVDVNGIIWTKI 603

Query: 102 CLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTP 161
            LD+E++++Y   +  +D + T  ATV I V +VND  P F      + +    L +   
Sbjct: 604 KLDFESQNNYTLNISLSDGVTTDYATVFIQVTDVNDNSPVFGITNTTIKI----LENTAA 659

Query: 162 GSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDSGHISI-VDLSALNTSTIQLVVVA 218
           G+ +  V A D D G    V  +L+G   KM  I+ SG I +  +L         L V+A
Sbjct: 660 GTSVTSVPATDVDTGFNGLVVYTLKGAEGKM-DIDASGLILLKKELDRETQGIYNLAVIA 718

Query: 219 TDTGNPPRQA 228
           +D G P   A
Sbjct: 719 SDQGQPRLSA 728



 Score = 45.4 bits (106), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 54/199 (27%), Positives = 90/199 (45%), Gaps = 22/199 (11%)

Query: 44   QFSKNEYSVSALENL----PVNYVLLTVTTNKPRDLRVKYWLSNDYGERFSISRQGDISL 99
            +F++  Y +   EN+    PV     +VT +        +++ N     F++   G ISL
Sbjct: 853  KFNQVTYDIVVFENIQKGSPV--CTFSVTDDDEAGFSQGHFIHN--STFFTVDIPGIISL 908

Query: 100  MQC--LDYETEDSYRFTVYATDTL---MTTSATVNISVVNVNDWDPRFRYPQYELFLPHI 154
                 LD ET   +   V+A D     + +S+  +I+V++VND +P F+   Y   +   
Sbjct: 909  RNDTELDRETTPGFTLQVWAVDAEKDGLNSSSLFHITVLDVNDNNPEFQMQSYSFAVLE- 967

Query: 155  PLADLTPG--SVIGKVEAADGDKGD--RVTLSLRGP-YEKMFSINDSGHISIVDLSALNT 209
               D   G  +V+G V A D D+G+  R+T  L     +  + I   G I +       T
Sbjct: 968  --GDYRLGAPAVVGHVTATDLDEGENARITYYLSSEDGDNPYDIQQDGTILVNGCVDRET 1025

Query: 210  -STIQLVVVATDTGNPPRQ 227
                +L++VA+D G P RQ
Sbjct: 1026 KEKYELLLVASDNGMPRRQ 1044



 Score = 42.7 bits (99), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 43/152 (28%), Positives = 65/152 (42%), Gaps = 21/152 (13%)

Query: 56   ENLPVNYV--LLTVTTNKPRDLRVKYWLSNDYGERFSISRQ-GDISLMQCLDYETEDS-Y 111
            ENLP   +  L+    +  R+  + Y + +  G +F I    G +      DYE E + Y
Sbjct: 1691 ENLPATQIVHLIARDNDTGRNGDLTYGILSGDGTKFRIDESTGILYSTVSFDYEEEPTEY 1750

Query: 112  RFTVYATDTLMTTS----ATVNISVVNVNDWDPRFRYPQYELFLPHIPLA---DLTPGSV 164
            +  +YA D           TV + + +VNDW P F         P  P +   ++    +
Sbjct: 1751 QVVIYAEDDGTPEKKRGYCTVVVKITDVNDWPPVFN--------PVTPFSVNENVDVEFI 1802

Query: 165  IGKVEAADGDKGDR--VTLSLRGPYEKMFSIN 194
            +GKV A D D GD   V  SL G    +F I+
Sbjct: 1803 VGKVTAMDRDTGDNAFVLYSLTGGGGNIFEID 1834



 Score = 41.2 bits (95), Expect = 0.95,   Method: Compositional matrix adjust.
 Identities = 48/173 (27%), Positives = 83/173 (47%), Gaps = 18/173 (10%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTTNKPRDL-----RVKYWLSNDYGERFSISRQGDIS 98
           +F +  Y+ S  E   +N  ++ V   + +DL      + Y L     + F I R+GD +
Sbjct: 124 EFLQALYNTSVSEVSAINSTVIKVEA-QDKDLSPLFSHISYSLLGPNSDYFYI-REGDGN 181

Query: 99  LM--QCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
           +M  + LDY   + +  TV A +     S TV++ +++V D+D    Y    ++   I  
Sbjct: 182 IMVNKTLDYNKINHFNLTVLAKERFGNNSNTVSL-IIDVQDYDTLNPYFSLSVYNGTISE 240

Query: 157 ADLTPGSVI-GKVEAADGDKG--DRVTLSLR----GPYEKMFSIN-DSGHISI 201
             L P S++  K+ A DGD G  ++V  S++      Y   FSI+ DSG + +
Sbjct: 241 NKLGPLSILPEKIFAKDGDTGINEKVYYSIKLVKPPAYSNTFSISADSGMLEV 293


>gi|229442261|gb|AAI72773.1| FAT tumor suppressor 1 precursor [synthetic construct]
          Length = 1338

 Score = 61.6 bits (148), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 65/227 (28%), Positives = 107/227 (47%), Gaps = 25/227 (11%)

Query: 33  VSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTV-TTNKPRDL--RVKYWLSNDYG-ER 88
           V+  G +L    F +NEY V   EN P++ +++ V TT+    +   V Y + ND+  +R
Sbjct: 404 VTVIGGNLHSPAFLQNEYEVELAENAPLHTLVMEVKTTDGDSGIYGHVTYHIVNDFAKDR 463

Query: 89  FSISRQGDISLMQCLDYET--EDSYRFTVYATDTLMTTS-ATVNISVVNVNDWDPRFRYP 145
           F I+ +G I  ++ LD ET  E      + A D     +  TVN+ + + ND  P+FR  
Sbjct: 464 FYINERGQIFTLEKLDRETPAEKVISVRLMAKDAGGKVAFCTVNVILTDDNDNAPQFRAT 523

Query: 146 QYELFLPHIPLADLTPGSVIGKVEAADGDKGDR--VTLSLRGPYEKM---FSIND-SGHI 199
           +YE+ +     +    G+ + KV A+D D+G    +T ++    E +     IN  SG I
Sbjct: 524 KYEVNIG----SSAAKGTSVVKVLASDADEGSNADITYAIEADSESVKENLEINKLSGVI 579

Query: 200 SIVD-LSALNTSTIQLVVVATDTGNPPRQASV-------PAIMHFPE 238
           +  + L  L        V A D G+P +++ V       P  M  P+
Sbjct: 580 TTKESLIGLENEFFTFFVRAVDNGSPSKESVVLVYVKILPPEMQLPK 626



 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 59/244 (24%), Positives = 106/244 (43%), Gaps = 40/244 (16%)

Query: 4   EDDFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYV 63
           E++F    T  VRA+   +  + ++  + V      ++  +FS+  Y+ +  E++P+   
Sbjct: 589 ENEFF---TFFVRAVDNGSPSKESVVLVYVKILPPEMQLPKFSEPFYTFTVSEDVPIGTE 645

Query: 64  LLTVTTNKPRDLRVKYWLSN----DYGERFSISRQ-GDISLMQCLDYETEDSYRFTVYAT 118
           +  +       +       N    +  E F I RQ G + L + LD+ET   Y+F++ A 
Sbjct: 646 IDLIRAEHSGTVLYSLVKGNTPESNRDESFVIDRQSGRLKLEKSLDHETTKWYQFSILAR 705

Query: 119 ----DTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGD 174
               D  M  S  V+I V + ND  P F    YE F+    + +L  GS + ++ A+D D
Sbjct: 706 CTQDDHEMVASVDVSIQVKDANDNSPVFESSPYEAFI----VENLPGGSRVIQIRASDAD 761

Query: 175 KGDRVTLSLRGPYEKMFSINDSGHISIVDLSALNTST----------------IQLVVVA 218
            G    +        M+S++ S  + +++  A+N  T                 Q+ VVA
Sbjct: 762 SGTNGQV--------MYSLDQSQSVEVIESFAINMETGWITTLKELDHEKRDNYQIKVVA 813

Query: 219 TDTG 222
           +D G
Sbjct: 814 SDHG 817



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 42/145 (28%), Positives = 68/145 (46%), Gaps = 8/145 (5%)

Query: 90   SISRQGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYEL 149
            +I  +  + + + LD E  D+Y  T+ ATD   ++ A V + V++ ND  P      Y  
Sbjct: 895  TIQNEWKVYVKKPLDREKRDNYLLTITATDGTFSSKAIVEVKVLDANDNSPVCEKTLYSD 954

Query: 150  FLPHIPLADLTPGSVIGKVEAADGD--KGDRVTLSLRGPYEKMFSIN-DSGHISI-VDLS 205
             +P     D+ PG +I ++ A D D      +T +L G   + F +N D+G +     L 
Sbjct: 955  TIPE----DVLPGKLIMQISATDADIRSNAEITYTLLGSGAEKFKLNPDTGELKTSTPLD 1010

Query: 206  ALNTSTIQLVVVATDTGNPPRQASV 230
                +   L+V ATD G    QAS+
Sbjct: 1011 REEQAVYHLLVRATDGGGRFCQASI 1035



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 61/225 (27%), Positives = 107/225 (47%), Gaps = 19/225 (8%)

Query: 13   LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKP 72
            L+VRA   D   R+  A+++++    +    +FS + Y+++  EN     +L  V     
Sbjct: 1019 LLVRAT--DGGGRFCQASIVLTLEDVNDNAPEFSADPYAITVFENTEPGTLLTRVQATDA 1076

Query: 73   R---DLRVKYWLSNDYGERFSISR-QGDISLMQCLDYETEDSYRFTVYATDT----LMTT 124
                + ++ Y L +    +FSI+   G I L + LD E +  Y  ++ A D      +T 
Sbjct: 1077 DAGLNRKILYSLIDSADGQFSINELSGIIQLEKPLDRELQAVYTLSLKAVDQGLPRRLTA 1136

Query: 125  SATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAA--DGDKGDRVTLS 182
            + TV +SV+++ND  P F Y +Y   +      D+  G+ + +V AA  D +    +T S
Sbjct: 1137 TGTVIVSVLDINDNPPVFEYREYGATVSE----DILVGTEVLQVYAASRDIEANAEITYS 1192

Query: 183  -LRGPYEKMFSIND-SGHISIVD-LSALNTSTIQLVVVATDTGNP 224
             + G     FSI+  +G + I++ L   ++    L V ATD G P
Sbjct: 1193 IISGNEHGKFSIDSKTGAVFIIENLDYESSHEYYLTVEATDGGTP 1237



 Score = 51.6 bits (122), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 43/158 (27%), Positives = 76/158 (48%), Gaps = 13/158 (8%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSN-DYGERFSIS-RQGDISLMQC 102
           F K  YS    E++ V+  ++ V  N P  L+V Y +++ D   +F+I+   G I+++  
Sbjct: 106 FEKPFYSAEIAESIQVHSPVVHVQANSPEGLKVFYSITDGDPFSQFTINFNTGVINVIAP 165

Query: 103 LDYETEDSYRFTVYATDTLMTTSATVNISVV--NVNDWDPRFRYPQYELFLPHIPLADLT 160
           LD+E   +Y+ ++ ATD+L    A V + ++  ++ND  P F    Y + L    +    
Sbjct: 166 LDFEAHPAYKLSIRATDSLTGAHAEVFVDIIVDDINDNPPVFAQQSYAVTLSEASVI--- 222

Query: 161 PGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSGH 198
            G+ + +V A D D         RG   +MF  +   H
Sbjct: 223 -GTSVVQVRATDSDSEPN-----RGISYQMFGNHSKSH 254



 Score = 47.4 bits (111), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 41/131 (31%), Positives = 65/131 (49%), Gaps = 12/131 (9%)

Query: 27   ALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLS---- 82
            A  T+IVS    +     F   EY  +  E++ V   +L V     RD+     ++    
Sbjct: 1136 ATGTVIVSVLDINDNPPVFEYREYGATVSEDILVGTEVLQVYA-ASRDIEANAEITYSII 1194

Query: 83   --NDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVN 136
              N++G +FSI S+ G + +++ LDYE+   Y  TV ATD     ++  ATVN++V ++N
Sbjct: 1195 SGNEHG-KFSIDSKTGAVFIIENLDYESSHEYYLTVEATDGGTPSLSDVATVNVNVTDIN 1253

Query: 137  DWDPRFRYPQY 147
            D  P F    Y
Sbjct: 1254 DNTPVFSQDTY 1264



 Score = 37.7 bits (86), Expect = 8.7,   Method: Compositional matrix adjust.
 Identities = 40/129 (31%), Positives = 57/129 (44%), Gaps = 14/129 (10%)

Query: 92  SRQGDISLMQCLDYETEDSYRFTVYATDTLMTTSAT---VNISVVNVNDWDPRFRYPQYE 148
           S  G ISL++ LDYE    +   V A D  M T ++   V + V ++ND  P F    YE
Sbjct: 261 SSTGLISLLRTLDYEQSRQHTIFVRAVDGGMPTLSSDVIVTVDVTDLNDNPPLFEQQIYE 320

Query: 149 LFL-PHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSINDSGHISIVDL 204
             +  H P      G  +  V+A D D  D   L    L G   K F I+ +    I+ L
Sbjct: 321 ARISEHAP-----HGHFVTCVKAYDADSSDIDKLQYSILSGNDHKHFVIDSA--TGIITL 373

Query: 205 SALNTSTIQ 213
           S L+   ++
Sbjct: 374 SNLHRHALK 382


>gi|148693090|gb|EDL25037.1| mCG142133 [Mus musculus]
          Length = 4539

 Score = 61.6 bits (148), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 71/227 (31%), Positives = 106/227 (46%), Gaps = 23/227 (10%)

Query: 13   LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKP 72
            L+ RA   D   R+  +++++     +     FS N Y+    EN     +L  V    P
Sbjct: 3084 LIARAT--DGGGRFCSSSVLLLLEDVNDNPPVFSSNHYTACVYENTATKALLTRVQAMDP 3141

Query: 73   R---DLRVKYWLSNDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATD----TLMTT 124
                + +V Y L +     FSI S  G I L Q LD E + SY  +V ATD      +++
Sbjct: 3142 DVGINRKVVYSLEDSASGVFSIDSSSGVIVLEQPLDREQQSSYNISVRATDQSPGQSLSS 3201

Query: 125  SATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGD--RVTLS 182
             A+V I+V+++ND  P F    Y + +P     D + G+ +  V A   D G    +T  
Sbjct: 3202 LASVTITVLDINDNPPVFERRDYLVTVPE----DTSLGTQVLSVFATSKDIGTNAEITYL 3257

Query: 183  LR-GPYEKMFSIN-DSGHISIVDLSALNTSTIQ---LVVVATDTGNP 224
            +R G  +  FSIN  +G IS+  L AL+  T +   LVV A D G P
Sbjct: 3258 IRSGNEQGKFSINPKTGGISV--LEALDYETCRRFYLVVEAKDGGTP 3302



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 66/204 (32%), Positives = 95/204 (46%), Gaps = 25/204 (12%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDL----RVKYWLSNDYGERFSISR-QGDISL 99
            F  + YSV  LE+LPV  V+  + T  P DL    +V+Y L NDY  RF + +  G I L
Sbjct: 919  FIPSSYSVKVLEDLPVGTVIAWLETQDP-DLGLGGQVRYSLVNDYNGRFEVDKASGAIRL 977

Query: 100  MQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIP---- 155
             + LDYE +  Y  TV A D          +S+ +V+  +         L  P+ P    
Sbjct: 978  SKELDYEKQQFYNLTVRAKDKGRP------VSLSSVSFVEVEVVDVNENLHTPYFPDFAV 1031

Query: 156  LADLTPGSVIG----KVEAADGDKG--DRVTLSLR-GPYEKMFSIND-SGHISIVD-LSA 206
            +  +   S IG    +V A D D G    +  S+R G     F+I+D SG I+  D L  
Sbjct: 1032 VGSVKENSRIGTSVLQVTAHDEDSGRDGEIQYSIRDGSGLGRFNIDDESGVITAADSLDR 1091

Query: 207  LNTSTIQLVVVATDTGNPPRQASV 230
              T++  L V ATD G  P  +++
Sbjct: 1092 ETTASYWLTVYATDRGVVPLYSTI 1115



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 60/197 (30%), Positives = 92/197 (46%), Gaps = 20/197 (10%)

Query: 43  LQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWL----SNDYGERFSIS-RQGDI 97
           ++F K+ Y VS  E  P   VL+ +    P  L V+Y L     +DY   F I+ R G I
Sbjct: 357 VRFEKDVYEVSISEFSPPG-VLVAIVKVSPEPLDVEYKLLPGKDSDY---FKINPRSGLI 412

Query: 98  SLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLA 157
              Q L+   ++ Y+  V  +D      A V I + + ND  P F+   YE F+      
Sbjct: 413 VTAQPLNTVKKEVYKLEV--SDKEGDAKAQVTIGIEDANDHTPEFQEALYETFVNE---- 466

Query: 158 DLTPGSVIGKVEAADGDKGDR--VTLSLRGPYEKMFSIND-SGHISIVDLSALNTS--TI 212
            +  G+ +  V A+D DKG+   +T S+       F+IN  +G IS  +     +S  T 
Sbjct: 467 SVRVGTNVLTVSASDKDKGENGYITYSIASLNLLPFAINQFTGVISTTEELDFESSPETY 526

Query: 213 QLVVVATDTGNPPRQAS 229
           + +V A+D G+P R  S
Sbjct: 527 RFIVRASDWGSPYRHES 543



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 64/214 (29%), Positives = 97/214 (45%), Gaps = 28/214 (13%)

Query: 53   SALENLPVNYVLLTVTTNKP---RDLRVKYWLSNDYG-ERFSISRQ-GDISLMQCLDYET 107
            S  EN  +   +L VT +     RD  ++Y + +  G  RF+I  + G I+    LD ET
Sbjct: 1034 SVKENSRIGTSVLQVTAHDEDSGRDGEIQYSIRDGSGLGRFNIDDESGVITAADSLDRET 1093

Query: 108  EDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSV 164
              SY  TVYATD     + ++  V I V +VND  P    P Y   +      D+   SV
Sbjct: 1094 TASYWLTVYATDRGVVPLYSTIEVYIEVEDVNDNAPLTSEPIYYPVVMENSPKDV---SV 1150

Query: 165  IGKVEAADGDKGDRVTLSLR---GPYEKMFSIN-DSGHISIVD--LSALNTSTIQLVVVA 218
            I +++A D D G    L+ R   G  +  F+IN  +G I+     L     +   L V  
Sbjct: 1151 I-QIQAEDPDSGSNEKLTYRITSGNPQNFFAINIKTGLITTTSRKLDREQQAEHFLEVTV 1209

Query: 219  TDTGNPPRQASVPAIM----------HFPEAIVQ 242
            TD G+ P+Q+++  ++           FPE + Q
Sbjct: 1210 TDGGSSPKQSTIWVVVQVLDENDNRPQFPEKVYQ 1243



 Score = 47.8 bits (112), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 53/198 (26%), Positives = 89/198 (44%), Gaps = 17/198 (8%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWL-SNDYGERFSIS-RQGDISLMQC 102
            F K  Y+ S  E++ +N  +L++    P    + Y +   D  ++F+I    G + ++  
Sbjct: 2169 FDKPFYTASINEDITMNTPILSINATSPEGQGIIYLIIDGDPFQQFNIDFDTGVLKVISP 2228

Query: 103  LDYETEDSYRFTVYATDTLMTTSA--TVNISVVNVNDWDPRFRYPQYELFLPHIPLADLT 160
            LDYE    Y+ TV A+D L    A  TV++ V ++ND  P F  P Y   L    L    
Sbjct: 2229 LDYEVTSVYKLTVRASDALTGARAEVTVDLLVDDINDNPPVFDQPTYNTTLSESSLI--- 2285

Query: 161  PGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSGHIS-----IVDLSALNTSTIQ-- 213
             G+ + ++ + D D G+   +  +   +  ++  D  HI      I+    L+   +Q  
Sbjct: 2286 -GTPVLQLVSTDADSGNNKLVRYQ-IVQDTYNSTDYFHIDSSSGLILTARMLDHELVQHC 2343

Query: 214  -LVVVATDTGNPPRQASV 230
             L V ATD G P   + V
Sbjct: 2344 TLKVTATDNGFPSLSSEV 2361



 Score = 45.1 bits (105), Expect = 0.067,   Method: Compositional matrix adjust.
 Identities = 68/231 (29%), Positives = 106/231 (45%), Gaps = 27/231 (11%)

Query: 27   ALATLIVSKAGTSLRELQFSKNEYSVSALEN-LPVNYVLLTVTTNKPRDLRVKYWLSNDY 85
            A+ T++V +A  S   L F+++ YS S  EN   +  V +        +  +KY + N  
Sbjct: 1949 AMVTVMVKEAMDS--GLHFTQSFYSTSISENSTNITKVAIVNAVGNRLNEPLKYSILNP- 2005

Query: 86   GERFSI-SRQGDISLMQC-LDYETEDSYRFTVYAT---DTLMTTSATVNISVVNVNDWDP 140
            G +F I S  G I       D E ++ Y   V A+   D L      V +++ +VND  P
Sbjct: 2006 GNKFKIKSTSGVIQTTGVPFDREEQELYELVVEASRELDHLRVARVVVRVNIEDVNDNSP 2065

Query: 141  RFRYPQYELFLPHIPLA--DLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIN-D 195
             F      + LP+      D  PG++I +V A D DKG    VT  L+  Y   F IN +
Sbjct: 2066 VF------VGLPYYAAVQVDAEPGTLIYRVTAIDKDKGANGEVTYVLQDDY-GHFEINPN 2118

Query: 196  SGHISIVDLSALNTSTIQ--LVVVATDTGNPPRQASVPAIMHFPEAIVQQA 244
            SG++ + +    + S I   + ++A D GNP    S+   +  P  IV +A
Sbjct: 2119 SGNVILREAFNSDLSNIDYGVTILAKDGGNP----SLSTFVELPITIVNKA 2165



 Score = 44.7 bits (104), Expect = 0.068,   Method: Compositional matrix adjust.
 Identities = 37/112 (33%), Positives = 62/112 (55%), Gaps = 10/112 (8%)

Query: 45   FSKNEYSVSALENLPVNYVLLTV-TTNKP--RDLRVKYWL--SNDYGERFSIS-RQGDIS 98
            F + +Y V+  E+  +   +L+V  T+K    +  + Y +   N+ G +FSI+ + G IS
Sbjct: 3219 FERRDYLVTVPEDTSLGTQVLSVFATSKDIGTNAEITYLIRSGNEQG-KFSINPKTGGIS 3277

Query: 99   LMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQY 147
            +++ LDYET   +   V A D     ++T+ATV+I + +VND  PRF    Y
Sbjct: 3278 VLEALDYETCRRFYLVVEAKDGGTPALSTAATVSIDLTDVNDNPPRFSQDVY 3329



 Score = 44.7 bits (104), Expect = 0.087,   Method: Compositional matrix adjust.
 Identities = 40/126 (31%), Positives = 57/126 (45%), Gaps = 12/126 (9%)

Query: 103  LDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPG 162
            LD E +D Y   + A+D L  T A V ++V +VND  P      Y   LP     D+   
Sbjct: 2973 LDREEQDIYFLNITASDGLFVTQAMVEVTVSDVNDNSPVCDQVAYSASLPE----DIPSN 3028

Query: 163  SVIGKVEAADGDKGDR--VTLSLRGPYEKMFSIN-DSGHISIVDLSALNTSTI---QLVV 216
             +I KV A D D G    +  SL G     F ++ +SG +    L+ L+   +    L+ 
Sbjct: 3029 KIILKVSAKDADIGSNGDIRYSLYGSGNNEFFLDPESGELKT--LAVLDRERVPVYNLIA 3086

Query: 217  VATDTG 222
             ATD G
Sbjct: 3087 RATDGG 3092



 Score = 42.0 bits (97), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 41/151 (27%), Positives = 68/151 (45%), Gaps = 19/151 (12%)

Query: 95   GDISLMQCLDYETEDSYRFTVYATDTL-MTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
            G I+  + LDYE   SY+  + AT+   M ++AT+++ +V+ ND  P F + QY      
Sbjct: 1704 GVITTRRALDYEHTSSYQLIIQATNMAGMASNATISVQIVDENDNPPVFLFSQYSG---- 1759

Query: 154  IPLADLTPGSVIGK--------VEAADGDKGDRVTLS---LRGPYEKMFSINDS-GHI-S 200
              L++  P + I +        + A D D      L    +    +K F+++ S G I +
Sbjct: 1760 -SLSEAAPINSIVRSLDNSPLVIRATDADSNQNALLVYQIVESTAKKFFTVDSSTGAIRT 1818

Query: 201  IVDLSALNTSTIQLVVVATDTGNPPRQASVP 231
            I +L     +     V   D+GNP   A  P
Sbjct: 1819 IANLDHEAIAHFHFHVHVRDSGNPQLTAESP 1849



 Score = 40.4 bits (93), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 56/202 (27%), Positives = 96/202 (47%), Gaps = 34/202 (16%)

Query: 45   FSKNEYSVSALENLPVNYVL--LTVTTNKPRDLRVKYWLSNDYGER--------FSISRQ 94
            F++++YS +  E+  +   +  L +  N+     V++ + N  GER        F I ++
Sbjct: 2691 FTQSQYSFTITEDTSIGSTVDTLRILPNQ----SVRFSMVN--GERPENNKEGVFIIEQE 2744

Query: 95   -GDISLMQCLDYETEDSYRFTVYATDTL----MTTSATVNISVVNVNDWDPRFRYPQYEL 149
             G I L + LD+E   ++ F V AT  L    +  +  V++ V+++ND  P F    YE 
Sbjct: 2745 TGAIKLDKRLDHEVSPAFHFKVAATIPLDKVDIVFTVDVDVKVLDLNDNKPVFETSTYET 2804

Query: 150  FLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGP--YEKM---FSIN-DSGHISI 201
             +    +  +  G+ + +V A D D G   +VT SL      EK+   F+I+ ++G IS 
Sbjct: 2805 II----MEGMPVGTKLAQVRAIDMDWGANGQVTYSLHSDSHLEKVIEAFNIDSNTGWIST 2860

Query: 202  V-DLSALNTSTIQLVVVATDTG 222
            + DL           VVA+D G
Sbjct: 2861 LKDLDHETDPAFSFFVVASDLG 2882



 Score = 40.4 bits (93), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 40/143 (27%), Positives = 70/143 (48%), Gaps = 17/143 (11%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYG-----ERFSI-SRQG 95
            F  + Y    +E +PV   L  V     +   + +V Y L +D       E F+I S  G
Sbjct: 2797 FETSTYETIIMEGMPVGTKLAQVRAIDMDWGANGQVTYSLHSDSHLEKVIEAFNIDSNTG 2856

Query: 96   DISLMQCLDYETEDSYRFTVYATDT----LMTTSATVNISVVNVNDWDPRFRYPQYELFL 151
             IS ++ LD+ET+ ++ F V A+D      +++ A V++ V ++ND  P F    +E++ 
Sbjct: 2857 WISTLKDLDHETDPAFSFFVVASDLGEAFSLSSMALVSVKVTDINDNAPVF---AHEVYR 2913

Query: 152  PHIPLADLTPGSVIGKVEAADGD 174
             ++  +D  PG V+  +   D D
Sbjct: 2914 GNVKESD-PPGEVVAVLSTLDKD 2935



 Score = 39.3 bits (90), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 53/203 (26%), Positives = 85/203 (41%), Gaps = 22/203 (10%)

Query: 44   QFSKNEYSVSALEN-LPVNYVLLTVTTNKPRDLRVKYWLSNDYG----ERFSIS-RQGDI 97
            +FS+  Y V+  E+ LP   +L    T++    ++ Y + +        +F +    G +
Sbjct: 1442 EFSQPHYDVTISEDVLPDTEILQIEATDRDEKHKLSYTIHSSIDAVSMRKFRMDPSTGVL 1501

Query: 98   SLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHI 154
               + LD+E +D +   +   D         A V ++V + ND  P F  P YE  +   
Sbjct: 1502 YTAERLDHEAQDKHILNIMVRDQEFPYRRNLARVIVNVEDANDHSPYFTNPLYEASV--- 1558

Query: 155  PLADLTPGSVIGKVEAADGDKGDRVTLSLR---GPYEKMFSINDS-GHISIV---DLSAL 207
                   GSV+ +V A D DKG+   L      G     F I    G I+I    D++A+
Sbjct: 1559 -FESAALGSVVLQVTALDKDKGENAELIYSIEAGNTGNTFKIEPVLGIITISKEPDMAAM 1617

Query: 208  NTSTIQLVVVATDTGNPPRQASV 230
                  L V  TD G+PP  A+ 
Sbjct: 1618 --GQFVLSVKVTDQGSPPMSATA 1638



 Score = 38.9 bits (89), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 25/90 (27%), Positives = 43/90 (47%), Gaps = 4/90 (4%)

Query: 95   GDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHI 154
            G I + + LD E    Y  +V  TD        V I V++ ND  P F  P Y++ +   
Sbjct: 1396 GTIVIAKPLDAEQRSVYNMSVEVTDGTNIAVTQVFIKVLDNNDNGPEFSQPHYDVTISE- 1454

Query: 155  PLADLTPGSVIGKVEAADGDKGDRVTLSLR 184
               D+ P + I ++EA D D+  +++ ++ 
Sbjct: 1455 ---DVLPDTEILQIEATDRDEKHKLSYTIH 1481



 Score = 38.5 bits (88), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 24/73 (32%), Positives = 39/73 (53%), Gaps = 3/73 (4%)

Query: 148  ELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSGHISIVDLSAL 207
            E+F+  + + D  PG VIGK+ A D D  D +T +L+   + +F +N S    I+ L  L
Sbjct: 3538 EIFI--VTMEDDFPGGVIGKIHATDQDMYDVLTFALKSEQKSLFKVN-SHDGKIIALGGL 3594

Query: 208  NTSTIQLVVVATD 220
            ++    L V  +D
Sbjct: 3595 DSGKYVLNVSVSD 3607



 Score = 38.1 bits (87), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 47/181 (25%), Positives = 79/181 (43%), Gaps = 15/181 (8%)

Query: 50   YSVSALENLPVNYVLLTVTTNKPR-----DLRVKYWLSNDYGERFSISRQGDISLMQCLD 104
            YS S  E++P N ++L V+          D+R   + S +  E F     G++  +  LD
Sbjct: 3017 YSASLPEDIPSNKIILKVSAKDADIGSNGDIRYSLYGSGN-NEFFLDPESGELKTLAVLD 3075

Query: 105  YETEDSYRFTVYATD-TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGS 163
             E    Y     ATD      S++V + + +VND  P F    Y   +      +    +
Sbjct: 3076 RERVPVYNLIARATDGGGRFCSSSVLLLLEDVNDNPPVFSSNHYTACV----YENTATKA 3131

Query: 164  VIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDSGHISIVD--LSALNTSTIQLVVVAT 219
            ++ +V+A D D G   +V  SL      +FSI+ S  + +++  L     S+  + V AT
Sbjct: 3132 LLTRVQAMDPDVGINRKVVYSLEDSASGVFSIDSSSGVIVLEQPLDREQQSSYNISVRAT 3191

Query: 220  D 220
            D
Sbjct: 3192 D 3192


>gi|410974947|ref|XP_003993900.1| PREDICTED: protocadherin-15 isoform 4 [Felis catus]
          Length = 1674

 Score = 61.6 bits (148), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 65/241 (26%), Positives = 111/241 (46%), Gaps = 27/241 (11%)

Query: 6   DFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVL- 64
           DF Q   LV++A Q +     A A+L +     + +   F+   Y    LE+ PV   + 
Sbjct: 356 DFHQKFDLVIKAEQDNGHPLPAFASLHIEILDENNQSPYFTMPSYQGYILESAPVGATIS 415

Query: 65  --LTVTT-----------NKPRDLRVKYWLSNDYGERFSISRQG---DISLMQCLDYETE 108
             L +TT              +D  +  +L NDY   F++++ G    ++L+Q +D E +
Sbjct: 416 DSLNLTTPLRIVALDKDIEDTKDPELHLFL-NDYTSVFTVTQTGITRYLTLLQPVDREEQ 474

Query: 109 DSYRFTVYATDTLMTTSAT-VNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGK 167
            +Y F++ A D +  +    VNI V++ ND  P F    Y++++      D++PG  + +
Sbjct: 475 QTYTFSITAFDGVQESEPVIVNIRVMDANDNTPTFPEISYDVYV----YTDMSPGDSVIQ 530

Query: 168 VEAADGDKGD--RVTLSLRGPYEKMFSIND-SGHISIVDLSALNTS-TIQLVVVATDTGN 223
           + A D D+G    +T  +    +  F+IN  +G I+I    AL    T  L V A D   
Sbjct: 531 LTAVDADEGSNGEITYEILVGAQGDFTINRTTGLITIAQGVALTVGRTYALTVQAADNAP 590

Query: 224 P 224
           P
Sbjct: 591 P 591



 Score = 61.6 bits (148), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 60/195 (30%), Positives = 99/195 (50%), Gaps = 14/195 (7%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGER-FSISRQ-GDISLMQ 101
           +F +  YS+   E + +  VLL +         + Y + N   +R F++S   G ++L +
Sbjct: 615 RFPQLMYSLEISEAMRIGAVLLNLQATDREGDPITYAIENGDPQRVFNLSETTGILTLGK 674

Query: 102 CLDYETEDSYRFTVYATDTL--MTTSATVNISVVNVNDWDPRFRYPQYELFLP-HIPLAD 158
            LD E+ D Y   V A+D     T++ATVN+ V +VND  P F     + +LP ++ + +
Sbjct: 675 ALDRESTDRYILIVTASDGRPDGTSTATVNVLVTDVNDNAPVF-----DPYLPRNLSVVE 729

Query: 159 LTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDSGHI-SIVDLSALNTSTIQLV 215
               + +G+V A D D G   +V  SL G +  +F I  +G I + V L+       +LV
Sbjct: 730 EEANAFVGQVRATDPDAGINGQVHYSL-GNFNNLFRITSNGSIYTAVKLNREVRDYYELV 788

Query: 216 VVATDTGNPPRQASV 230
           VVATD    PR +++
Sbjct: 789 VVATDGAVHPRHSTL 803



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 71/233 (30%), Positives = 103/233 (44%), Gaps = 26/233 (11%)

Query: 13   LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKP 72
            LVV A       R++  TL +           F+ + Y+V   ENLP     L +   K 
Sbjct: 787  LVVVATDGAVHPRHSTLTLAIKVLDIDDNSPVFTNSTYTVIVEENLPAGTTFLQIEA-KD 845

Query: 73   RDL--RVKYWLSNDYGERFSISR--QGDISLMQCLDYET----EDSYRFTVYATD---TL 121
             DL   V Y + +   + F       G++SL++ LDYE+    E S  F V A D   T+
Sbjct: 846  VDLGANVSYRIRSPEVKHFFALHPFTGELSLLRSLDYESFPDQEASITFLVEAFDIYGTM 905

Query: 122  MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDK----GD 177
                ATV + V ++ND+ P F    Y+  +      D   G+ I  V A D D       
Sbjct: 906  PPGIATVTVIVKDMNDYPPVFSKRIYKGMV----APDAVKGTPITTVYAEDADPPGLPAS 961

Query: 178  RVTL---SLRGPY-EKMFSIN-DSGH-ISIVDLSALNTSTIQLVVVATDTGNP 224
            RV      ++ PY   +F +  DSG  I+ V+L+   T+  +LVVVA D G P
Sbjct: 962  RVRYRVDDVQFPYPASIFDVEEDSGRVITRVNLNEEPTTIFKLVVVAFDDGEP 1014



 Score = 44.3 bits (103), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 35/119 (29%), Positives = 55/119 (46%), Gaps = 8/119 (6%)

Query: 76  RVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDTLMT---TSATVNISV 132
           +V Y L N +   F I+  G I     L+ E  D Y   V ATD  +    ++ T+ I V
Sbjct: 751 QVHYSLGN-FNNLFRITSNGSIYTAVKLNREVRDYYELVVVATDGAVHPRHSTLTLAIKV 809

Query: 133 VNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMF 191
           ++++D  P F    Y + +      +L  G+   ++EA D D G  V+  +R P  K F
Sbjct: 810 LDIDDNSPVFTNSTYTVIVEE----NLPAGTTFLQIEAKDVDLGANVSYRIRSPEVKHF 864


>gi|172046767|sp|Q8BNA6.2|FAT3_MOUSE RecName: Full=Protocadherin Fat 3; AltName: Full=FAT tumor suppressor
            homolog 3; Flags: Precursor
          Length = 4555

 Score = 61.6 bits (148), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 71/227 (31%), Positives = 106/227 (46%), Gaps = 23/227 (10%)

Query: 13   LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKP 72
            L+ RA   D   R+  +++++     +     FS N Y+    EN     +L  V    P
Sbjct: 3100 LIARAT--DGGGRFCSSSVLLLLEDVNDNPPVFSSNHYTACVYENTATKALLTRVQAMDP 3157

Query: 73   R---DLRVKYWLSNDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATD----TLMTT 124
                + +V Y L +     FSI S  G I L Q LD E + SY  +V ATD      +++
Sbjct: 3158 DVGINRKVVYSLEDSASGVFSIDSSSGVIVLEQPLDREQQSSYNISVRATDQSPGQSLSS 3217

Query: 125  SATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGD--RVTLS 182
             A+V I+V+++ND  P F    Y + +P     D + G+ +  V A   D G    +T  
Sbjct: 3218 LASVTITVLDINDNPPVFERRDYLVTVPE----DTSLGTQVLSVFATSKDIGTNAEITYL 3273

Query: 183  LR-GPYEKMFSIN-DSGHISIVDLSALNTSTIQ---LVVVATDTGNP 224
            +R G  +  FSIN  +G IS+  L AL+  T +   LVV A D G P
Sbjct: 3274 IRSGNEQGKFSINPKTGGISV--LEALDYETCRRFYLVVEAKDGGTP 3318



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 66/204 (32%), Positives = 95/204 (46%), Gaps = 25/204 (12%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDL----RVKYWLSNDYGERFSISR-QGDISL 99
            F  + YSV  LE+LPV  V+  + T  P DL    +V+Y L NDY  RF + +  G I L
Sbjct: 935  FIPSSYSVKVLEDLPVGTVIAWLETQDP-DLGLGGQVRYSLVNDYNGRFEVDKASGAIRL 993

Query: 100  MQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIP---- 155
             + LDYE +  Y  TV A D          +S+ +V+  +         L  P+ P    
Sbjct: 994  SKELDYEKQQFYNLTVRAKDKGRP------VSLSSVSFVEVEVVDVNENLHTPYFPDFAV 1047

Query: 156  LADLTPGSVIG----KVEAADGDKG--DRVTLSLR-GPYEKMFSIND-SGHISIVD-LSA 206
            +  +   S IG    +V A D D G    +  S+R G     F+I+D SG I+  D L  
Sbjct: 1048 VGSVKENSRIGTSVLQVTAHDEDSGRDGEIQYSIRDGSGLGRFNIDDESGVITAADSLDR 1107

Query: 207  LNTSTIQLVVVATDTGNPPRQASV 230
              T++  L V ATD G  P  +++
Sbjct: 1108 ETTASYWLTVYATDRGVVPLYSTI 1131



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 60/197 (30%), Positives = 92/197 (46%), Gaps = 20/197 (10%)

Query: 43  LQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWL----SNDYGERFSIS-RQGDI 97
           ++F K+ Y VS  E  P   VL+ +    P  L V+Y L     +DY   F I+ R G I
Sbjct: 373 VRFEKDVYEVSISEFSPPG-VLVAIVKVSPEPLDVEYKLLPGKDSDY---FKINPRSGLI 428

Query: 98  SLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLA 157
              Q L+   ++ Y+  V  +D      A V I + + ND  P F+   YE F+      
Sbjct: 429 VTAQPLNTVKKEVYKLEV--SDKEGDAKAQVTIGIEDANDHTPEFQEALYETFVNE---- 482

Query: 158 DLTPGSVIGKVEAADGDKGDR--VTLSLRGPYEKMFSIND-SGHISIVDLSALNTS--TI 212
            +  G+ +  V A+D DKG+   +T S+       F+IN  +G IS  +     +S  T 
Sbjct: 483 SVRVGTNVLTVSASDKDKGENGYITYSIASLNLLPFAINQFTGVISTTEELDFESSPETY 542

Query: 213 QLVVVATDTGNPPRQAS 229
           + +V A+D G+P R  S
Sbjct: 543 RFIVRASDWGSPYRHES 559



 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 64/214 (29%), Positives = 97/214 (45%), Gaps = 28/214 (13%)

Query: 53   SALENLPVNYVLLTVTTNKP---RDLRVKYWLSNDYG-ERFSISRQ-GDISLMQCLDYET 107
            S  EN  +   +L VT +     RD  ++Y + +  G  RF+I  + G I+    LD ET
Sbjct: 1050 SVKENSRIGTSVLQVTAHDEDSGRDGEIQYSIRDGSGLGRFNIDDESGVITAADSLDRET 1109

Query: 108  EDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSV 164
              SY  TVYATD     + ++  V I V +VND  P    P Y   +      D+   SV
Sbjct: 1110 TASYWLTVYATDRGVVPLYSTIEVYIEVEDVNDNAPLTSEPIYYPVVMENSPKDV---SV 1166

Query: 165  IGKVEAADGDKGDRVTLSLR---GPYEKMFSIN-DSGHISIVD--LSALNTSTIQLVVVA 218
            I +++A D D G    L+ R   G  +  F+IN  +G I+     L     +   L V  
Sbjct: 1167 I-QIQAEDPDSGSNEKLTYRITSGNPQNFFAINIKTGLITTTSRKLDREQQAEHFLEVTV 1225

Query: 219  TDTGNPPRQASVPAIM----------HFPEAIVQ 242
            TD G+ P+Q+++  ++           FPE + Q
Sbjct: 1226 TDGGSSPKQSTIWVVVQVLDENDNRPQFPEKVYQ 1259



 Score = 47.8 bits (112), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 53/198 (26%), Positives = 89/198 (44%), Gaps = 17/198 (8%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWL-SNDYGERFSIS-RQGDISLMQC 102
            F K  Y+ S  E++ +N  +L++    P    + Y +   D  ++F+I    G + ++  
Sbjct: 2185 FDKPFYTASINEDITMNTPILSINATSPEGQGIIYLIIDGDPFQQFNIDFDTGVLKVISP 2244

Query: 103  LDYETEDSYRFTVYATDTLMTTSA--TVNISVVNVNDWDPRFRYPQYELFLPHIPLADLT 160
            LDYE    Y+ TV A+D L    A  TV++ V ++ND  P F  P Y   L    L    
Sbjct: 2245 LDYEVTSVYKLTVRASDALTGARAEVTVDLLVDDINDNPPVFDQPTYNTTLSESSLI--- 2301

Query: 161  PGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSGHIS-----IVDLSALNTSTIQ-- 213
             G+ + ++ + D D G+   +  +   +  ++  D  HI      I+    L+   +Q  
Sbjct: 2302 -GTPVLQLVSTDADSGNNKLVRYQ-IVQDTYNSTDYFHIDSSSGLILTARMLDHELVQHC 2359

Query: 214  -LVVVATDTGNPPRQASV 230
             L V ATD G P   + V
Sbjct: 2360 TLKVTATDNGFPSLSSEV 2377



 Score = 45.1 bits (105), Expect = 0.065,   Method: Compositional matrix adjust.
 Identities = 37/112 (33%), Positives = 62/112 (55%), Gaps = 10/112 (8%)

Query: 45   FSKNEYSVSALENLPVNYVLLTV-TTNKP--RDLRVKYWL--SNDYGERFSIS-RQGDIS 98
            F + +Y V+  E+  +   +L+V  T+K    +  + Y +   N+ G +FSI+ + G IS
Sbjct: 3235 FERRDYLVTVPEDTSLGTQVLSVFATSKDIGTNAEITYLIRSGNEQG-KFSINPKTGGIS 3293

Query: 99   LMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQY 147
            +++ LDYET   +   V A D     ++T+ATV+I + +VND  PRF    Y
Sbjct: 3294 VLEALDYETCRRFYLVVEAKDGGTPALSTAATVSIDLTDVNDNPPRFSQDVY 3345



 Score = 45.1 bits (105), Expect = 0.067,   Method: Compositional matrix adjust.
 Identities = 68/231 (29%), Positives = 106/231 (45%), Gaps = 27/231 (11%)

Query: 27   ALATLIVSKAGTSLRELQFSKNEYSVSALEN-LPVNYVLLTVTTNKPRDLRVKYWLSNDY 85
            A+ T++V +A  S   L F+++ YS S  EN   +  V +        +  +KY + N  
Sbjct: 1965 AMVTVMVKEAMDS--GLHFTQSFYSTSISENSTNITKVAIVNAVGNRLNEPLKYSILNP- 2021

Query: 86   GERFSI-SRQGDISLMQC-LDYETEDSYRFTVYAT---DTLMTTSATVNISVVNVNDWDP 140
            G +F I S  G I       D E ++ Y   V A+   D L      V +++ +VND  P
Sbjct: 2022 GNKFKIKSTSGVIQTTGVPFDREEQELYELVVEASRELDHLRVARVVVRVNIEDVNDNSP 2081

Query: 141  RFRYPQYELFLPHIPLA--DLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIN-D 195
             F      + LP+      D  PG++I +V A D DKG    VT  L+  Y   F IN +
Sbjct: 2082 VF------VGLPYYAAVQVDAEPGTLIYRVTAIDKDKGANGEVTYVLQDDY-GHFEINPN 2134

Query: 196  SGHISIVDLSALNTSTIQ--LVVVATDTGNPPRQASVPAIMHFPEAIVQQA 244
            SG++ + +    + S I   + ++A D GNP    S+   +  P  IV +A
Sbjct: 2135 SGNVILREAFNSDLSNIDYGVTILAKDGGNP----SLSTFVELPITIVNKA 2181



 Score = 44.3 bits (103), Expect = 0.089,   Method: Compositional matrix adjust.
 Identities = 40/126 (31%), Positives = 57/126 (45%), Gaps = 12/126 (9%)

Query: 103  LDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPG 162
            LD E +D Y   + A+D L  T A V ++V +VND  P      Y   LP     D+   
Sbjct: 2989 LDREEQDIYFLNITASDGLFVTQAMVEVTVSDVNDNSPVCDQVAYSASLPE----DIPSN 3044

Query: 163  SVIGKVEAADGDKGDR--VTLSLRGPYEKMFSIN-DSGHISIVDLSALNTSTI---QLVV 216
             +I KV A D D G    +  SL G     F ++ +SG +    L+ L+   +    L+ 
Sbjct: 3045 KIILKVSAKDADIGSNGDIRYSLYGSGNNEFFLDPESGELKT--LAVLDRERVPVYNLIA 3102

Query: 217  VATDTG 222
             ATD G
Sbjct: 3103 RATDGG 3108



 Score = 42.0 bits (97), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 41/151 (27%), Positives = 68/151 (45%), Gaps = 19/151 (12%)

Query: 95   GDISLMQCLDYETEDSYRFTVYATDTL-MTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
            G I+  + LDYE   SY+  + AT+   M ++AT+++ +V+ ND  P F + QY      
Sbjct: 1720 GVITTRRALDYEHTSSYQLIIQATNMAGMASNATISVQIVDENDNPPVFLFSQYSG---- 1775

Query: 154  IPLADLTPGSVIGK--------VEAADGDKGDRVTLS---LRGPYEKMFSINDS-GHI-S 200
              L++  P + I +        + A D D      L    +    +K F+++ S G I +
Sbjct: 1776 -SLSEAAPINSIVRSLDNSPLVIRATDADSNQNALLVYQIVESTAKKFFTVDSSTGAIRT 1834

Query: 201  IVDLSALNTSTIQLVVVATDTGNPPRQASVP 231
            I +L     +     V   D+GNP   A  P
Sbjct: 1835 IANLDHEAIAHFHFHVHVRDSGNPQLTAESP 1865



 Score = 40.8 bits (94), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 56/202 (27%), Positives = 96/202 (47%), Gaps = 34/202 (16%)

Query: 45   FSKNEYSVSALENLPVNYVL--LTVTTNKPRDLRVKYWLSNDYGER--------FSISRQ 94
            F++++YS +  E+  +   +  L +  N+     V++ + N  GER        F I ++
Sbjct: 2707 FTQSQYSFTITEDTSIGSTVDTLRILPNQ----SVRFSMVN--GERPENNKEGVFIIEQE 2760

Query: 95   -GDISLMQCLDYETEDSYRFTVYATDTL----MTTSATVNISVVNVNDWDPRFRYPQYEL 149
             G I L + LD+E   ++ F V AT  L    +  +  V++ V+++ND  P F    YE 
Sbjct: 2761 TGAIKLDKRLDHEVSPAFHFKVAATIPLDKVDIVFTVDVDVKVLDLNDNKPVFETSTYET 2820

Query: 150  FLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGP--YEKM---FSIN-DSGHISI 201
             +    +  +  G+ + +V A D D G   +VT SL      EK+   F+I+ ++G IS 
Sbjct: 2821 II----MEGMPVGTKLAQVRAIDMDWGANGQVTYSLHSDSHLEKVIEAFNIDSNTGWIST 2876

Query: 202  V-DLSALNTSTIQLVVVATDTG 222
            + DL           VVA+D G
Sbjct: 2877 LKDLDHETDPAFSFFVVASDLG 2898



 Score = 40.4 bits (93), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 40/143 (27%), Positives = 70/143 (48%), Gaps = 17/143 (11%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYG-----ERFSI-SRQG 95
            F  + Y    +E +PV   L  V     +   + +V Y L +D       E F+I S  G
Sbjct: 2813 FETSTYETIIMEGMPVGTKLAQVRAIDMDWGANGQVTYSLHSDSHLEKVIEAFNIDSNTG 2872

Query: 96   DISLMQCLDYETEDSYRFTVYATDT----LMTTSATVNISVVNVNDWDPRFRYPQYELFL 151
             IS ++ LD+ET+ ++ F V A+D      +++ A V++ V ++ND  P F    +E++ 
Sbjct: 2873 WISTLKDLDHETDPAFSFFVVASDLGEAFSLSSMALVSVKVTDINDNAPVF---AHEVYR 2929

Query: 152  PHIPLADLTPGSVIGKVEAADGD 174
             ++  +D  PG V+  +   D D
Sbjct: 2930 GNVKESD-PPGEVVAVLSTLDKD 2951



 Score = 39.3 bits (90), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 53/203 (26%), Positives = 85/203 (41%), Gaps = 22/203 (10%)

Query: 44   QFSKNEYSVSALEN-LPVNYVLLTVTTNKPRDLRVKYWLSNDYG----ERFSIS-RQGDI 97
            +FS+  Y V+  E+ LP   +L    T++    ++ Y + +        +F +    G +
Sbjct: 1458 EFSQPHYDVTISEDVLPDTEILQIEATDRDEKHKLSYTIHSSIDAVSMRKFRMDPSTGVL 1517

Query: 98   SLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHI 154
               + LD+E +D +   +   D         A V ++V + ND  P F  P YE  +   
Sbjct: 1518 YTAERLDHEAQDKHILNIMVRDQEFPYRRNLARVIVNVEDANDHSPYFTNPLYEASV--- 1574

Query: 155  PLADLTPGSVIGKVEAADGDKGDRVTLSLR---GPYEKMFSINDS-GHISIV---DLSAL 207
                   GSV+ +V A D DKG+   L      G     F I    G I+I    D++A+
Sbjct: 1575 -FESAALGSVVLQVTALDKDKGENAELIYSIEAGNTGNTFKIEPVLGIITISKEPDMAAM 1633

Query: 208  NTSTIQLVVVATDTGNPPRQASV 230
                  L V  TD G+PP  A+ 
Sbjct: 1634 --GQFVLSVKVTDQGSPPMSATA 1654



 Score = 38.9 bits (89), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 25/90 (27%), Positives = 43/90 (47%), Gaps = 4/90 (4%)

Query: 95   GDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHI 154
            G I + + LD E    Y  +V  TD        V I V++ ND  P F  P Y++ +   
Sbjct: 1412 GTIVIAKPLDAEQRSVYNMSVEVTDGTNIAVTQVFIKVLDNNDNGPEFSQPHYDVTISE- 1470

Query: 155  PLADLTPGSVIGKVEAADGDKGDRVTLSLR 184
               D+ P + I ++EA D D+  +++ ++ 
Sbjct: 1471 ---DVLPDTEILQIEATDRDEKHKLSYTIH 1497



 Score = 38.5 bits (88), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 24/73 (32%), Positives = 39/73 (53%), Gaps = 3/73 (4%)

Query: 148  ELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSGHISIVDLSAL 207
            E+F+  + + D  PG VIGK+ A D D  D +T +L+   + +F +N S    I+ L  L
Sbjct: 3554 EIFI--VTMEDDFPGGVIGKIHATDQDMYDVLTFALKSEQKSLFKVN-SHDGKIIALGGL 3610

Query: 208  NTSTIQLVVVATD 220
            ++    L V  +D
Sbjct: 3611 DSGKYVLNVSVSD 3623



 Score = 38.1 bits (87), Expect = 6.3,   Method: Compositional matrix adjust.
 Identities = 47/181 (25%), Positives = 79/181 (43%), Gaps = 15/181 (8%)

Query: 50   YSVSALENLPVNYVLLTVTTNKPR-----DLRVKYWLSNDYGERFSISRQGDISLMQCLD 104
            YS S  E++P N ++L V+          D+R   + S +  E F     G++  +  LD
Sbjct: 3033 YSASLPEDIPSNKIILKVSAKDADIGSNGDIRYSLYGSGN-NEFFLDPESGELKTLAVLD 3091

Query: 105  YETEDSYRFTVYATD-TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGS 163
             E    Y     ATD      S++V + + +VND  P F    Y   +      +    +
Sbjct: 3092 RERVPVYNLIARATDGGGRFCSSSVLLLLEDVNDNPPVFSSNHYTACV----YENTATKA 3147

Query: 164  VIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDSGHISIVD--LSALNTSTIQLVVVAT 219
            ++ +V+A D D G   +V  SL      +FSI+ S  + +++  L     S+  + V AT
Sbjct: 3148 LLTRVQAMDPDVGINRKVVYSLEDSASGVFSIDSSSGVIVLEQPLDREQQSSYNISVRAT 3207

Query: 220  D 220
            D
Sbjct: 3208 D 3208


>gi|357614378|gb|EHJ69045.1| fat protein [Danaus plexippus]
          Length = 1382

 Score = 61.6 bits (148), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 55/171 (32%), Positives = 85/171 (49%), Gaps = 16/171 (9%)

Query: 77  VKYWLSNDYGERFSISRQ-----GDISLMQCLDYETEDSYRFTVYATDTL---MTTSATV 128
           V Y+LS++   ++  +       G +S +  LD E    Y   V A D      +++ATV
Sbjct: 572 VSYYLSSNIERKYPNTFMLDPITGQLSAVTELDRERIPLYEIQVIAKDQGYRPQSSTATV 631

Query: 129 NISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGD--RVTLSLRGP 186
            + V++VND DP F YPQ   +   I   DL PGS + +V+A D D+GD  +V   L   
Sbjct: 632 FLRVIDVNDNDPIF-YPQR--YFESI-REDLAPGSRVLQVKAFDLDEGDNSKVVYKLESG 687

Query: 187 YEKMFSIN-DSGHISIVD-LSALNTSTIQLVVVATDTGNPPRQASVPAIMH 235
            E  F +  ++G+I +   L         L +VA+D G P R + VP ++H
Sbjct: 688 GEGYFDVEPENGYIYVKSPLDREEKDYYSLTIVASDHGKPSRSSQVPVVIH 738



 Score = 40.8 bits (94), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 54/107 (50%), Gaps = 10/107 (9%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWL-----SNDYGERFSI-SRQGDIS 98
            F +++ +VS LE  PVN  ++    N   DL +   L     S +  E F I S  G++ 
Sbjct: 964  FEQSQMNVSVLETEPVNKKIIQFHANDA-DLGINNELQYSITSGNRKETFFIDSYSGELF 1022

Query: 99   LMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRF 142
            L + LDYE   SY   + ATD     +++S T  ++V++ ND  P F
Sbjct: 1023 LHKHLDYEDLTSYVLNITATDNGNPSLSSSITFTVTVIDANDNAPIF 1069



 Score = 38.1 bits (87), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 42/139 (30%), Positives = 64/139 (46%), Gaps = 17/139 (12%)

Query: 103 LDYETEDSYRFTVYATDTLMTTS---ATVNISVVNVNDWDPRFRYPQYELFLPHIPLADL 159
           LD ET D Y   + A D           VN+S+++VND  P F    + + L       +
Sbjct: 168 LDRETNDFYILNISARDGGSPPKYGYLQVNVSILDVNDNPPIFDQSDFSVSLNE----SV 223

Query: 160 TPGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSIN-DSGHISIVDLSAL-----NTS-- 210
            PG+ + KV A D D GD   ++      EK F+++ +SG I+ +   +      NT+  
Sbjct: 224 PPGTTVLKVTATDSDLGDNSKITYEVTDTEKQFAVDPESGVITTLKKLSCPKYCSNTTCN 283

Query: 211 -TIQLVVVATDTGNPPRQA 228
            T  L V+A D G P + A
Sbjct: 284 MTCVLTVIAKDHGVPRQDA 302


>gi|410974949|ref|XP_003993901.1| PREDICTED: protocadherin-15 isoform 5 [Felis catus]
          Length = 1672

 Score = 61.6 bits (148), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 65/241 (26%), Positives = 111/241 (46%), Gaps = 27/241 (11%)

Query: 6   DFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVL- 64
           DF Q   LV++A Q +     A A+L +     + +   F+   Y    LE+ PV   + 
Sbjct: 356 DFHQKFDLVIKAEQDNGHPLPAFASLHIEILDENNQSPYFTMPSYQGYILESAPVGATIS 415

Query: 65  --LTVTT-----------NKPRDLRVKYWLSNDYGERFSISRQG---DISLMQCLDYETE 108
             L +TT              +D  +  +L NDY   F++++ G    ++L+Q +D E +
Sbjct: 416 DSLNLTTPLRIVALDKDIEDTKDPELHLFL-NDYTSVFTVTQTGITRYLTLLQPVDREEQ 474

Query: 109 DSYRFTVYATDTLMTTSAT-VNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGK 167
            +Y F++ A D +  +    VNI V++ ND  P F    Y++++      D++PG  + +
Sbjct: 475 QTYTFSITAFDGVQESEPVIVNIRVMDANDNTPTFPEISYDVYV----YTDMSPGDSVIQ 530

Query: 168 VEAADGDKGD--RVTLSLRGPYEKMFSIND-SGHISIVDLSALNTS-TIQLVVVATDTGN 223
           + A D D+G    +T  +    +  F+IN  +G I+I    AL    T  L V A D   
Sbjct: 531 LTAVDADEGSNGEITYEILVGAQGDFTINRTTGLITIAQGVALTVGRTYALTVQAADNAP 590

Query: 224 P 224
           P
Sbjct: 591 P 591



 Score = 61.6 bits (148), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 60/195 (30%), Positives = 99/195 (50%), Gaps = 14/195 (7%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGER-FSISRQ-GDISLMQ 101
           +F +  YS+   E + +  VLL +         + Y + N   +R F++S   G ++L +
Sbjct: 615 RFPQLMYSLEISEAMRIGAVLLNLQATDREGDPITYAIENGDPQRVFNLSETTGILTLGK 674

Query: 102 CLDYETEDSYRFTVYATDTL--MTTSATVNISVVNVNDWDPRFRYPQYELFLP-HIPLAD 158
            LD E+ D Y   V A+D     T++ATVN+ V +VND  P F     + +LP ++ + +
Sbjct: 675 ALDRESTDRYILIVTASDGRPDGTSTATVNVLVTDVNDNAPVF-----DPYLPRNLSVVE 729

Query: 159 LTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDSGHI-SIVDLSALNTSTIQLV 215
               + +G+V A D D G   +V  SL G +  +F I  +G I + V L+       +LV
Sbjct: 730 EEANAFVGQVRATDPDAGINGQVHYSL-GNFNNLFRITSNGSIYTAVKLNREVRDYYELV 788

Query: 216 VVATDTGNPPRQASV 230
           VVATD    PR +++
Sbjct: 789 VVATDGAVHPRHSTL 803



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 71/233 (30%), Positives = 103/233 (44%), Gaps = 26/233 (11%)

Query: 13   LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKP 72
            LVV A       R++  TL +           F+ + Y+V   ENLP     L +   K 
Sbjct: 787  LVVVATDGAVHPRHSTLTLAIKVLDIDDNSPVFTNSTYTVIVEENLPAGTTFLQIEA-KD 845

Query: 73   RDL--RVKYWLSNDYGERFSISR--QGDISLMQCLDYET----EDSYRFTVYATD---TL 121
             DL   V Y + +   + F       G++SL++ LDYE+    E S  F V A D   T+
Sbjct: 846  VDLGANVSYRIRSPEVKHFFALHPFTGELSLLRSLDYESFPDQEASITFLVEAFDIYGTM 905

Query: 122  MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDK----GD 177
                ATV + V ++ND+ P F    Y+  +      D   G+ I  V A D D       
Sbjct: 906  PPGIATVTVIVKDMNDYPPVFSKRIYKGMV----APDAVKGTPITTVYAEDADPPGLPAS 961

Query: 178  RVTL---SLRGPY-EKMFSIN-DSGH-ISIVDLSALNTSTIQLVVVATDTGNP 224
            RV      ++ PY   +F +  DSG  I+ V+L+   T+  +LVVVA D G P
Sbjct: 962  RVRYRVDDVQFPYPASIFDVEEDSGRVITRVNLNEEPTTIFKLVVVAFDDGEP 1014



 Score = 44.3 bits (103), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 35/119 (29%), Positives = 55/119 (46%), Gaps = 8/119 (6%)

Query: 76  RVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDTLMT---TSATVNISV 132
           +V Y L N +   F I+  G I     L+ E  D Y   V ATD  +    ++ T+ I V
Sbjct: 751 QVHYSLGN-FNNLFRITSNGSIYTAVKLNREVRDYYELVVVATDGAVHPRHSTLTLAIKV 809

Query: 133 VNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMF 191
           ++++D  P F    Y + +      +L  G+   ++EA D D G  V+  +R P  K F
Sbjct: 810 LDIDDNSPVFTNSTYTVIVEE----NLPAGTTFLQIEAKDVDLGANVSYRIRSPEVKHF 864


>gi|410974951|ref|XP_003993902.1| PREDICTED: protocadherin-15 isoform 6 [Felis catus]
          Length = 1681

 Score = 61.6 bits (148), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 60/195 (30%), Positives = 99/195 (50%), Gaps = 14/195 (7%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGER-FSISRQ-GDISLMQ 101
           +F +  YS+   E + +  VLL +         + Y + N   +R F++S   G ++L +
Sbjct: 622 RFPQLMYSLEISEAMRIGAVLLNLQATDREGDPITYAIENGDPQRVFNLSETTGILTLGK 681

Query: 102 CLDYETEDSYRFTVYATDTL--MTTSATVNISVVNVNDWDPRFRYPQYELFLP-HIPLAD 158
            LD E+ D Y   V A+D     T++ATVN+ V +VND  P F     + +LP ++ + +
Sbjct: 682 ALDRESTDRYILIVTASDGRPDGTSTATVNVLVTDVNDNAPVF-----DPYLPRNLSVVE 736

Query: 159 LTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDSGHI-SIVDLSALNTSTIQLV 215
               + +G+V A D D G   +V  SL G +  +F I  +G I + V L+       +LV
Sbjct: 737 EEANAFVGQVRATDPDAGINGQVHYSL-GNFNNLFRITSNGSIYTAVKLNREVRDYYELV 795

Query: 216 VVATDTGNPPRQASV 230
           VVATD    PR +++
Sbjct: 796 VVATDGAVHPRHSTL 810



 Score = 58.2 bits (139), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 66/248 (26%), Positives = 113/248 (45%), Gaps = 34/248 (13%)

Query: 6   DFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVL- 64
           DF Q   LV++A Q +     A A+L +     + +   F+   Y    LE+ PV   + 
Sbjct: 356 DFHQKFDLVIKAEQDNGHPLPAFASLHIEILDENNQSPYFTMPSYQGYILESAPVGATIS 415

Query: 65  --LTVTT------------NKP------RDLRVKYWLSNDYGERFSISRQG---DISLMQ 101
             L +TT            + P      +D  +  +L NDY   F++++ G    ++L+Q
Sbjct: 416 DSLNLTTPLRIVALDKDIEDVPPGGVPTKDPELHLFL-NDYTSVFTVTQTGITRYLTLLQ 474

Query: 102 CLDYETEDSYRFTVYATDTLMTTSAT-VNISVVNVNDWDPRFRYPQYELFLPHIPLADLT 160
            +D E + +Y F++ A D +  +    VNI V++ ND  P F    Y++++      D++
Sbjct: 475 PVDREEQQTYTFSITAFDGVQESEPVIVNIRVMDANDNTPTFPEISYDVYV----YTDMS 530

Query: 161 PGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSIND-SGHISIVDLSALNTS-TIQLVV 216
           PG  + ++ A D D+G    +T  +    +  F+IN  +G I+I    AL    T  L V
Sbjct: 531 PGDSVIQLTAVDADEGSNGEITYEILVGAQGDFTINRTTGLITIAQGVALTVGRTYALTV 590

Query: 217 VATDTGNP 224
            A D   P
Sbjct: 591 QAADNAPP 598



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 71/233 (30%), Positives = 103/233 (44%), Gaps = 26/233 (11%)

Query: 13   LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKP 72
            LVV A       R++  TL +           F+ + Y+V   ENLP     L +   K 
Sbjct: 794  LVVVATDGAVHPRHSTLTLAIKVLDIDDNSPVFTNSTYTVIVEENLPAGTTFLQIEA-KD 852

Query: 73   RDL--RVKYWLSNDYGERFSISR--QGDISLMQCLDYET----EDSYRFTVYATD---TL 121
             DL   V Y + +   + F       G++SL++ LDYE+    E S  F V A D   T+
Sbjct: 853  VDLGANVSYRIRSPEVKHFFALHPFTGELSLLRSLDYESFPDQEASITFLVEAFDIYGTM 912

Query: 122  MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDK----GD 177
                ATV + V ++ND+ P F    Y+  +      D   G+ I  V A D D       
Sbjct: 913  PPGIATVTVIVKDMNDYPPVFSKRIYKGMV----APDAVKGTPITTVYAEDADPPGLPAS 968

Query: 178  RVTL---SLRGPY-EKMFSIN-DSGH-ISIVDLSALNTSTIQLVVVATDTGNP 224
            RV      ++ PY   +F +  DSG  I+ V+L+   T+  +LVVVA D G P
Sbjct: 969  RVRYRVDDVQFPYPASIFDVEEDSGRVITRVNLNEEPTTIFKLVVVAFDDGEP 1021



 Score = 44.3 bits (103), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 35/119 (29%), Positives = 55/119 (46%), Gaps = 8/119 (6%)

Query: 76  RVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDTLMT---TSATVNISV 132
           +V Y L N +   F I+  G I     L+ E  D Y   V ATD  +    ++ T+ I V
Sbjct: 758 QVHYSLGN-FNNLFRITSNGSIYTAVKLNREVRDYYELVVVATDGAVHPRHSTLTLAIKV 816

Query: 133 VNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMF 191
           ++++D  P F    Y + +      +L  G+   ++EA D D G  V+  +R P  K F
Sbjct: 817 LDIDDNSPVFTNSTYTVIVEE----NLPAGTTFLQIEAKDVDLGANVSYRIRSPEVKHF 871


>gi|124249105|ref|NP_001074283.1| protocadherin Fat 3 precursor [Mus musculus]
          Length = 4551

 Score = 61.6 bits (148), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 71/227 (31%), Positives = 106/227 (46%), Gaps = 23/227 (10%)

Query: 13   LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKP 72
            L+ RA   D   R+  +++++     +     FS N Y+    EN     +L  V    P
Sbjct: 3096 LIARAT--DGGGRFCSSSVLLLLEDVNDNPPVFSSNHYTACVYENTATKALLTRVQAMDP 3153

Query: 73   R---DLRVKYWLSNDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATD----TLMTT 124
                + +V Y L +     FSI S  G I L Q LD E + SY  +V ATD      +++
Sbjct: 3154 DVGINRKVVYSLEDSASGVFSIDSSSGVIVLEQPLDREQQSSYNISVRATDQSPGQSLSS 3213

Query: 125  SATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGD--RVTLS 182
             A+V I+V+++ND  P F    Y + +P     D + G+ +  V A   D G    +T  
Sbjct: 3214 LASVTITVLDINDNPPVFERRDYLVTVPE----DTSLGTQVLSVFATSKDIGTNAEITYL 3269

Query: 183  LR-GPYEKMFSIN-DSGHISIVDLSALNTSTIQ---LVVVATDTGNP 224
            +R G  +  FSIN  +G IS+  L AL+  T +   LVV A D G P
Sbjct: 3270 IRSGNEQGKFSINPKTGGISV--LEALDYETCRRFYLVVEAKDGGTP 3314



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 66/204 (32%), Positives = 95/204 (46%), Gaps = 25/204 (12%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDL----RVKYWLSNDYGERFSISR-QGDISL 99
            F  + YSV  LE+LPV  V+  + T  P DL    +V+Y L NDY  RF + +  G I L
Sbjct: 931  FIPSSYSVKVLEDLPVGTVIAWLETQDP-DLGLGGQVRYSLVNDYNGRFEVDKASGAIRL 989

Query: 100  MQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIP---- 155
             + LDYE +  Y  TV A D          +S+ +V+  +         L  P+ P    
Sbjct: 990  SKELDYEKQQFYNLTVRAKDKGRP------VSLSSVSFVEVEVVDVNENLHTPYFPDFAV 1043

Query: 156  LADLTPGSVIG----KVEAADGDKG--DRVTLSLR-GPYEKMFSIND-SGHISIVD-LSA 206
            +  +   S IG    +V A D D G    +  S+R G     F+I+D SG I+  D L  
Sbjct: 1044 VGSVKENSRIGTSVLQVTAHDEDSGRDGEIQYSIRDGSGLGRFNIDDESGVITAADSLDR 1103

Query: 207  LNTSTIQLVVVATDTGNPPRQASV 230
              T++  L V ATD G  P  +++
Sbjct: 1104 ETTASYWLTVYATDRGVVPLYSTI 1127



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 60/197 (30%), Positives = 92/197 (46%), Gaps = 20/197 (10%)

Query: 43  LQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWL----SNDYGERFSIS-RQGDI 97
           ++F K+ Y VS  E  P   VL+ +    P  L V+Y L     +DY   F I+ R G I
Sbjct: 369 VRFEKDVYEVSISEFSPPG-VLVAIVKVSPEPLDVEYKLLPGKDSDY---FKINPRSGLI 424

Query: 98  SLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLA 157
              Q L+   ++ Y+  V  +D      A V I + + ND  P F+   YE F+      
Sbjct: 425 VTAQPLNTVKKEVYKLEV--SDKEGDAKAQVTIGIEDANDHTPEFQEALYETFVNE---- 478

Query: 158 DLTPGSVIGKVEAADGDKGDR--VTLSLRGPYEKMFSIND-SGHISIVDLSALNTS--TI 212
            +  G+ +  V A+D DKG+   +T S+       F+IN  +G IS  +     +S  T 
Sbjct: 479 SVRVGTNVLTVSASDKDKGENGYITYSIASLNLLPFAINQFTGVISTTEELDFESSPETY 538

Query: 213 QLVVVATDTGNPPRQAS 229
           + +V A+D G+P R  S
Sbjct: 539 RFIVRASDWGSPYRHES 555



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 64/214 (29%), Positives = 97/214 (45%), Gaps = 28/214 (13%)

Query: 53   SALENLPVNYVLLTVTTNKP---RDLRVKYWLSNDYG-ERFSISRQ-GDISLMQCLDYET 107
            S  EN  +   +L VT +     RD  ++Y + +  G  RF+I  + G I+    LD ET
Sbjct: 1046 SVKENSRIGTSVLQVTAHDEDSGRDGEIQYSIRDGSGLGRFNIDDESGVITAADSLDRET 1105

Query: 108  EDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSV 164
              SY  TVYATD     + ++  V I V +VND  P    P Y   +      D+   SV
Sbjct: 1106 TASYWLTVYATDRGVVPLYSTIEVYIEVEDVNDNAPLTSEPIYYPVVMENSPKDV---SV 1162

Query: 165  IGKVEAADGDKGDRVTLSLR---GPYEKMFSIN-DSGHISIVD--LSALNTSTIQLVVVA 218
            I +++A D D G    L+ R   G  +  F+IN  +G I+     L     +   L V  
Sbjct: 1163 I-QIQAEDPDSGSNEKLTYRITSGNPQNFFAINIKTGLITTTSRKLDREQQAEHFLEVTV 1221

Query: 219  TDTGNPPRQASVPAIM----------HFPEAIVQ 242
            TD G+ P+Q+++  ++           FPE + Q
Sbjct: 1222 TDGGSSPKQSTIWVVVQVLDENDNRPQFPEKVYQ 1255



 Score = 47.8 bits (112), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 53/198 (26%), Positives = 89/198 (44%), Gaps = 17/198 (8%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWL-SNDYGERFSIS-RQGDISLMQC 102
            F K  Y+ S  E++ +N  +L++    P    + Y +   D  ++F+I    G + ++  
Sbjct: 2181 FDKPFYTASINEDITMNTPILSINATSPEGQGIIYLIIDGDPFQQFNIDFDTGVLKVISP 2240

Query: 103  LDYETEDSYRFTVYATDTLMTTSA--TVNISVVNVNDWDPRFRYPQYELFLPHIPLADLT 160
            LDYE    Y+ TV A+D L    A  TV++ V ++ND  P F  P Y   L    L    
Sbjct: 2241 LDYEVTSVYKLTVRASDALTGARAEVTVDLLVDDINDNPPVFDQPTYNTTLSESSLI--- 2297

Query: 161  PGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSGHIS-----IVDLSALNTSTIQ-- 213
             G+ + ++ + D D G+   +  +   +  ++  D  HI      I+    L+   +Q  
Sbjct: 2298 -GTPVLQLVSTDADSGNNKLVRYQ-IVQDTYNSTDYFHIDSSSGLILTARMLDHELVQHC 2355

Query: 214  -LVVVATDTGNPPRQASV 230
             L V ATD G P   + V
Sbjct: 2356 TLKVTATDNGFPSLSSEV 2373



 Score = 45.1 bits (105), Expect = 0.067,   Method: Compositional matrix adjust.
 Identities = 37/112 (33%), Positives = 62/112 (55%), Gaps = 10/112 (8%)

Query: 45   FSKNEYSVSALENLPVNYVLLTV-TTNKP--RDLRVKYWL--SNDYGERFSIS-RQGDIS 98
            F + +Y V+  E+  +   +L+V  T+K    +  + Y +   N+ G +FSI+ + G IS
Sbjct: 3231 FERRDYLVTVPEDTSLGTQVLSVFATSKDIGTNAEITYLIRSGNEQG-KFSINPKTGGIS 3289

Query: 99   LMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQY 147
            +++ LDYET   +   V A D     ++T+ATV+I + +VND  PRF    Y
Sbjct: 3290 VLEALDYETCRRFYLVVEAKDGGTPALSTAATVSIDLTDVNDNPPRFSQDVY 3341



 Score = 44.7 bits (104), Expect = 0.068,   Method: Compositional matrix adjust.
 Identities = 68/231 (29%), Positives = 106/231 (45%), Gaps = 27/231 (11%)

Query: 27   ALATLIVSKAGTSLRELQFSKNEYSVSALEN-LPVNYVLLTVTTNKPRDLRVKYWLSNDY 85
            A+ T++V +A  S   L F+++ YS S  EN   +  V +        +  +KY + N  
Sbjct: 1961 AMVTVMVKEAMDS--GLHFTQSFYSTSISENSTNITKVAIVNAVGNRLNEPLKYSILNP- 2017

Query: 86   GERFSI-SRQGDISLMQC-LDYETEDSYRFTVYAT---DTLMTTSATVNISVVNVNDWDP 140
            G +F I S  G I       D E ++ Y   V A+   D L      V +++ +VND  P
Sbjct: 2018 GNKFKIKSTSGVIQTTGVPFDREEQELYELVVEASRELDHLRVARVVVRVNIEDVNDNSP 2077

Query: 141  RFRYPQYELFLPHIPLA--DLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIN-D 195
             F      + LP+      D  PG++I +V A D DKG    VT  L+  Y   F IN +
Sbjct: 2078 VF------VGLPYYAAVQVDAEPGTLIYRVTAIDKDKGANGEVTYVLQDDY-GHFEINPN 2130

Query: 196  SGHISIVDLSALNTSTIQ--LVVVATDTGNPPRQASVPAIMHFPEAIVQQA 244
            SG++ + +    + S I   + ++A D GNP    S+   +  P  IV +A
Sbjct: 2131 SGNVILREAFNSDLSNIDYGVTILAKDGGNP----SLSTFVELPITIVNKA 2177



 Score = 44.3 bits (103), Expect = 0.088,   Method: Compositional matrix adjust.
 Identities = 40/126 (31%), Positives = 57/126 (45%), Gaps = 12/126 (9%)

Query: 103  LDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPG 162
            LD E +D Y   + A+D L  T A V ++V +VND  P      Y   LP     D+   
Sbjct: 2985 LDREEQDIYFLNITASDGLFVTQAMVEVTVSDVNDNSPVCDQVAYSASLPE----DIPSN 3040

Query: 163  SVIGKVEAADGDKGDR--VTLSLRGPYEKMFSIN-DSGHISIVDLSALNTSTI---QLVV 216
             +I KV A D D G    +  SL G     F ++ +SG +    L+ L+   +    L+ 
Sbjct: 3041 KIILKVSAKDADIGSNGDIRYSLYGSGNNEFFLDPESGELKT--LAVLDRERVPVYNLIA 3098

Query: 217  VATDTG 222
             ATD G
Sbjct: 3099 RATDGG 3104



 Score = 42.0 bits (97), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 41/151 (27%), Positives = 68/151 (45%), Gaps = 19/151 (12%)

Query: 95   GDISLMQCLDYETEDSYRFTVYATDTL-MTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
            G I+  + LDYE   SY+  + AT+   M ++AT+++ +V+ ND  P F + QY      
Sbjct: 1716 GVITTRRALDYEHTSSYQLIIQATNMAGMASNATISVQIVDENDNPPVFLFSQYSG---- 1771

Query: 154  IPLADLTPGSVIGK--------VEAADGDKGDRVTLS---LRGPYEKMFSINDS-GHI-S 200
              L++  P + I +        + A D D      L    +    +K F+++ S G I +
Sbjct: 1772 -SLSEAAPINSIVRSLDNSPLVIRATDADSNQNALLVYQIVESTAKKFFTVDSSTGAIRT 1830

Query: 201  IVDLSALNTSTIQLVVVATDTGNPPRQASVP 231
            I +L     +     V   D+GNP   A  P
Sbjct: 1831 IANLDHEAIAHFHFHVHVRDSGNPQLTAESP 1861



 Score = 40.8 bits (94), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 56/202 (27%), Positives = 96/202 (47%), Gaps = 34/202 (16%)

Query: 45   FSKNEYSVSALENLPVNYVL--LTVTTNKPRDLRVKYWLSNDYGER--------FSISRQ 94
            F++++YS +  E+  +   +  L +  N+     V++ + N  GER        F I ++
Sbjct: 2703 FTQSQYSFTITEDTSIGSTVDTLRILPNQ----SVRFSMVN--GERPENNKEGVFIIEQE 2756

Query: 95   -GDISLMQCLDYETEDSYRFTVYATDTL----MTTSATVNISVVNVNDWDPRFRYPQYEL 149
             G I L + LD+E   ++ F V AT  L    +  +  V++ V+++ND  P F    YE 
Sbjct: 2757 TGAIKLDKRLDHEVSPAFHFKVAATIPLDKVDIVFTVDVDVKVLDLNDNKPVFETSTYET 2816

Query: 150  FLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGP--YEKM---FSIN-DSGHISI 201
             +    +  +  G+ + +V A D D G   +VT SL      EK+   F+I+ ++G IS 
Sbjct: 2817 II----MEGMPVGTKLAQVRAIDMDWGANGQVTYSLHSDSHLEKVIEAFNIDSNTGWIST 2872

Query: 202  V-DLSALNTSTIQLVVVATDTG 222
            + DL           VVA+D G
Sbjct: 2873 LKDLDHETDPAFSFFVVASDLG 2894



 Score = 40.4 bits (93), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 40/143 (27%), Positives = 70/143 (48%), Gaps = 17/143 (11%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYG-----ERFSI-SRQG 95
            F  + Y    +E +PV   L  V     +   + +V Y L +D       E F+I S  G
Sbjct: 2809 FETSTYETIIMEGMPVGTKLAQVRAIDMDWGANGQVTYSLHSDSHLEKVIEAFNIDSNTG 2868

Query: 96   DISLMQCLDYETEDSYRFTVYATDT----LMTTSATVNISVVNVNDWDPRFRYPQYELFL 151
             IS ++ LD+ET+ ++ F V A+D      +++ A V++ V ++ND  P F    +E++ 
Sbjct: 2869 WISTLKDLDHETDPAFSFFVVASDLGEAFSLSSMALVSVKVTDINDNAPVF---AHEVYR 2925

Query: 152  PHIPLADLTPGSVIGKVEAADGD 174
             ++  +D  PG V+  +   D D
Sbjct: 2926 GNVKESD-PPGEVVAVLSTLDKD 2947



 Score = 39.3 bits (90), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 53/203 (26%), Positives = 85/203 (41%), Gaps = 22/203 (10%)

Query: 44   QFSKNEYSVSALEN-LPVNYVLLTVTTNKPRDLRVKYWLSNDYG----ERFSIS-RQGDI 97
            +FS+  Y V+  E+ LP   +L    T++    ++ Y + +        +F +    G +
Sbjct: 1454 EFSQPHYDVTISEDVLPDTEILQIEATDRDEKHKLSYTIHSSIDAVSMRKFRMDPSTGVL 1513

Query: 98   SLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHI 154
               + LD+E +D +   +   D         A V ++V + ND  P F  P YE  +   
Sbjct: 1514 YTAERLDHEAQDKHILNIMVRDQEFPYRRNLARVIVNVEDANDHSPYFTNPLYEASV--- 1570

Query: 155  PLADLTPGSVIGKVEAADGDKGDRVTLSLR---GPYEKMFSINDS-GHISIV---DLSAL 207
                   GSV+ +V A D DKG+   L      G     F I    G I+I    D++A+
Sbjct: 1571 -FESAALGSVVLQVTALDKDKGENAELIYSIEAGNTGNTFKIEPVLGIITISKEPDMAAM 1629

Query: 208  NTSTIQLVVVATDTGNPPRQASV 230
                  L V  TD G+PP  A+ 
Sbjct: 1630 --GQFVLSVKVTDQGSPPMSATA 1650



 Score = 38.9 bits (89), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 25/90 (27%), Positives = 43/90 (47%), Gaps = 4/90 (4%)

Query: 95   GDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHI 154
            G I + + LD E    Y  +V  TD        V I V++ ND  P F  P Y++ +   
Sbjct: 1408 GTIVIAKPLDAEQRSVYNMSVEVTDGTNIAVTQVFIKVLDNNDNGPEFSQPHYDVTISE- 1466

Query: 155  PLADLTPGSVIGKVEAADGDKGDRVTLSLR 184
               D+ P + I ++EA D D+  +++ ++ 
Sbjct: 1467 ---DVLPDTEILQIEATDRDEKHKLSYTIH 1493



 Score = 38.5 bits (88), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 24/73 (32%), Positives = 39/73 (53%), Gaps = 3/73 (4%)

Query: 148  ELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSGHISIVDLSAL 207
            E+F+  + + D  PG VIGK+ A D D  D +T +L+   + +F +N S    I+ L  L
Sbjct: 3550 EIFI--VTMEDDFPGGVIGKIHATDQDMYDVLTFALKSEQKSLFKVN-SHDGKIIALGGL 3606

Query: 208  NTSTIQLVVVATD 220
            ++    L V  +D
Sbjct: 3607 DSGKYVLNVSVSD 3619



 Score = 38.1 bits (87), Expect = 6.6,   Method: Compositional matrix adjust.
 Identities = 47/181 (25%), Positives = 79/181 (43%), Gaps = 15/181 (8%)

Query: 50   YSVSALENLPVNYVLLTVTTNKPR-----DLRVKYWLSNDYGERFSISRQGDISLMQCLD 104
            YS S  E++P N ++L V+          D+R   + S +  E F     G++  +  LD
Sbjct: 3029 YSASLPEDIPSNKIILKVSAKDADIGSNGDIRYSLYGSGN-NEFFLDPESGELKTLAVLD 3087

Query: 105  YETEDSYRFTVYATD-TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGS 163
             E    Y     ATD      S++V + + +VND  P F    Y   +      +    +
Sbjct: 3088 RERVPVYNLIARATDGGGRFCSSSVLLLLEDVNDNPPVFSSNHYTACV----YENTATKA 3143

Query: 164  VIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDSGHISIVD--LSALNTSTIQLVVVAT 219
            ++ +V+A D D G   +V  SL      +FSI+ S  + +++  L     S+  + V AT
Sbjct: 3144 LLTRVQAMDPDVGINRKVVYSLEDSASGVFSIDSSSGVIVLEQPLDREQQSSYNISVRAT 3203

Query: 220  D 220
            D
Sbjct: 3204 D 3204


>gi|403285083|ref|XP_003933869.1| PREDICTED: protocadherin Fat 1 [Saimiri boliviensis boliviensis]
          Length = 4589

 Score = 61.6 bits (148), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 65/217 (29%), Positives = 103/217 (47%), Gaps = 18/217 (8%)

Query: 29   ATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDY 85
            A + V+  G +L    F +NEY V   EN  ++ ++  V T   +     RV Y + ND+
Sbjct: 2476 AQVHVTVIGGNLHSPAFLQNEYEVELAENAALHTLVTEVKTVDGDSGIYGRVTYHIVNDF 2535

Query: 86   G-ERFSISRQGDISLMQCLDYET--EDSYRFTVYATDTLMTTS-ATVNISVVNVNDWDPR 141
              +RF I+ +G I  ++ LD ET  E      + A D     +  TVN+ + + ND  P+
Sbjct: 2536 AKDRFYINERGQIFTLEKLDRETPAEKVISVRLMAKDAGGKVAFCTVNVILTDDNDNAPQ 2595

Query: 142  FRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDR--VTLSLRGPYEKM---FSIND- 195
            FR  +YE+ +     +    G+ + KV A+D D+G    VT ++    E +     IN  
Sbjct: 2596 FRATRYEVNIG----SGAAKGTSVIKVLASDADEGSNADVTYAIESDSESVKENLEINKL 2651

Query: 196  SGHISIVD-LSALNTSTIQLVVVATDTGNPPRQASVP 231
            SG I+  + L  L        V A D G+P R++ VP
Sbjct: 2652 SGLITTKESLIGLENEFFTFFVRAMDNGSPSRESVVP 2688



 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/156 (25%), Positives = 77/156 (49%), Gaps = 11/156 (7%)

Query: 33   VSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWL---SNDYGERF 89
            +SK   S   + F ++ ++ + +E+ PV +++  ++   P    +  W      +Y   F
Sbjct: 1346 ISKPKPSPEPMSFEESFFTFTVMESDPVAHMIGVISVEPPG---IPLWFDITGGNYDSHF 1402

Query: 90   SISR-QGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYE 148
             + +  G I + + LD E + +Y  TV ATD   T    V I V++ ND  P+F   +YE
Sbjct: 1403 DVDKGTGTIIVAKPLDAEQKSNYNLTVEATDGTTTILTQVFIKVIDTNDHRPQFSTSKYE 1462

Query: 149  LFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR 184
            + +P     D  P + I ++ A D D+ +++  +L+
Sbjct: 1463 VVIPE----DTVPETEILQISATDQDEKNKLIYTLQ 1494



 Score = 55.8 bits (133), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 57/201 (28%), Positives = 95/201 (47%), Gaps = 23/201 (11%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSN-DYGERFSIS-RQGDISLMQC 102
            F K  YS    EN+ V+  ++ V  N P  L+V Y +++ D   +F+++   G +S++  
Sbjct: 2182 FEKPFYSAEIPENIQVHSPVVHVQANSPEGLKVFYSIADGDPFSQFTVNFNTGVVSVVAP 2241

Query: 103  LDYETEDSYRFTVYATDTLMTTSATVNISVV--NVNDWDPRFRYPQYELFLPHIPLADLT 160
            LD+E   +Y+ ++ ATD+L    A V + ++  ++ND  P F    Y         A L+
Sbjct: 2242 LDFEAHPAYKLSIRATDSLTGAHAEVFVDIIVEDINDNPPVFAQQSY--------AATLS 2293

Query: 161  PGSVIG----KVEAADGDKGDRVTLSLR-----GPYEKMFSINDS-GHISIVD-LSALNT 209
              SVIG    +V A D D      +S +        +  F I+ S G IS++  L    +
Sbjct: 2294 EASVIGTSVVQVRATDSDSEPNRGISYQMFGNLSKSQDHFHIDSSTGLISLLRTLDYERS 2353

Query: 210  STIQLVVVATDTGNPPRQASV 230
                ++V A D G PP  + V
Sbjct: 2354 RQHTILVRAVDGGMPPLSSEV 2374



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 59/236 (25%), Positives = 108/236 (45%), Gaps = 24/236 (10%)

Query: 4    EDDFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYV 63
            E++F    T  VRA+   +  R ++  + V      ++  +FS+  Y+ +  E++P+   
Sbjct: 2665 ENEFF---TFFVRAMDNGSPSRESVVPVYVKILPPEMQLPKFSEPFYTYTVSEDMPIGTE 2721

Query: 64   LLTVTTNKPRDLRVKYWLSN----DYGERFSISRQ-GDISLMQCLDYETEDSYRFTVYA- 117
            +  +       +       N    +  E F I RQ G + L + LD+ET   ++F++ A 
Sbjct: 2722 IDLIQAEHSGTVLYSLVKGNTPESNRDESFVIDRQSGRLKLEKSLDHETTKWHQFSILAR 2781

Query: 118  ---TDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGD 174
                D  M +S  V+I V + ND  P F    YE F+    + +L  GS + ++ A+D D
Sbjct: 2782 CTEEDYEMVSSVEVSIQVKDANDNSPVFESSPYEAFI----VENLPAGSRVIQIRASDVD 2837

Query: 175  KGD------RVTLSLRGPYEKMFSIN-DSGHISIV-DLSALNTSTIQLVVVATDTG 222
             G       R+  S      + F+++ ++G I+ + +L        Q+ VVA+D G
Sbjct: 2838 SGANGQVVYRLDQSQSTEVIESFAVHTETGWITTLKELDHEKRGNYQIKVVASDHG 2893



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 42/145 (28%), Positives = 67/145 (46%), Gaps = 8/145 (5%)

Query: 90   SISRQGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYEL 149
            +I  +  + + + LD E  D+Y  T+ ATD   ++ A V + V++ ND  P      Y  
Sbjct: 2971 NIQNEWKVYVKKPLDREKRDNYLLTITATDGTFSSKAIVEVKVLDANDNSPVCEKTLYSD 3030

Query: 150  FLPHIPLADLTPGSVIGKVEAADGD--KGDRVTLSLRGPYEKMFSIN-DSGHISI-VDLS 205
             +P     D  PG +I +V A D D      +T +L G   + F +N D+G +     L 
Sbjct: 3031 TIPE----DTLPGKLIMQVSATDADIRSNAEITYTLLGSGAEKFKLNPDTGELKTSAPLD 3086

Query: 206  ALNTSTIQLVVVATDTGNPPRQASV 230
                +   L+V ATD G    +AS+
Sbjct: 3087 REEQAVYHLLVRATDGGGRFCEASI 3111



 Score = 51.2 bits (121), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 69/263 (26%), Positives = 121/263 (46%), Gaps = 30/263 (11%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLS------NDYGERFSI-SRQGDI 97
            F   EY  +  E++ V   +L V     RD+     ++      N++G +FSI S+ G +
Sbjct: 3230 FEYREYGATVSEDILVGTEVLQVYAAS-RDIEANAEITYSIISGNEHG-KFSIDSKTGAV 3287

Query: 98   SLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHI 154
             +++ LDYE+   Y  TV ATD     ++  ATV+I+V ++ND  P F    Y   +   
Sbjct: 3288 FIIENLDYESSHEYYLTVEATDGGTPSLSDVATVSINVTDINDNTPVFSQDTYTAVISED 3347

Query: 155  PLADLTPGSVIGKVEAADGDKGDRVTLS-LRGPYEKMFSIND-SGHISIVDLSALNTSTI 212
             + + +  +V+   + ADG     +  S + G     F+I+   G + +  +  L+  TI
Sbjct: 3348 AVLEQSVITVMA--DDADGPLNSHIHYSIIDGNRGSSFTIDPVRGDVKVTKV--LDRETI 3403

Query: 213  Q---LVVVATDTGNPPRQASVPAIMHFPEAIVQQASSKLNSGTSSTVLIILGVVLIVLGF 269
                L V A+D G+PPR  +    +   +  V   +   + G  S ++     V    GF
Sbjct: 3404 SGYTLTVQASDNGSPPRVNTTTVNIDVSD--VNDNAPAFSRGNYSVIIQENKPV----GF 3457

Query: 270  VIILLILYIHKNKHTKNNGPPGS 292
             ++ L++  + + H   NGPP S
Sbjct: 3458 SVLQLVVTDNDSSH---NGPPFS 3477



 Score = 45.8 bits (107), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 57/195 (29%), Positives = 88/195 (45%), Gaps = 20/195 (10%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTTNKPRDL----RVKYWLSNDYGERFSI-SRQGDIS 98
            +F +  Y V   E+  V+  ++ V     +DL    RV Y +  D  + FSI S  G + 
Sbjct: 821  EFLQESYFVEVSEDKEVHSEIIQVEATD-KDLGPNGRVTYSVLTD-TDMFSIDSTAGVVK 878

Query: 99   LMQCLDYETEDSYRFTVYATDTL-----MTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
            ++Q LD E +  +   + A D       + ++  + +S+ +VND  P+F  P Y + +  
Sbjct: 879  ILQPLDREVQPVHYLKIEARDQAREEPQLFSTVVLKVSLEDVNDNPPKFIPPNYRVKV-- 936

Query: 154  IPLADLTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSIND-SGHISIV-DLSALNT 209
                DL  G+VI  +EA D D G   +V  SL    E  F ++  SG + IV  L     
Sbjct: 937  --REDLPEGTVIMWLEAYDPDLGQSGQVRYSLVDHGEGNFDVDKLSGAVRIVQQLDFEKK 994

Query: 210  STIQLVVVATDTGNP 224
                L V A D G P
Sbjct: 995  QVYNLTVKAKDKGKP 1009



 Score = 44.3 bits (103), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 44/164 (26%), Positives = 74/164 (45%), Gaps = 18/164 (10%)

Query: 45   FSKNEYSVSALENLPVNYVLL--TVTTNK------PRDLRVKYWLSNDYGERFSISRQGD 96
            FS+  YSV   EN PV + +L   VT N       P    +   +S +    F +++QG 
Sbjct: 3440 FSRGNYSVIIQENKPVGFSVLQLVVTDNDSSHNGPPFSFAI---VSGNDERAFEVNQQGV 3496

Query: 97   ISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
            +     +  + +D Y   V   D     +T+ A ++I V+  + + P       E+F+  
Sbjct: 3497 LLTSAAIKRKEKDRYLLQVEVADNGKPPLTSLAYIDIRVIEESIYPPAIL--PLEIFI-- 3552

Query: 154  IPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSG 197
                +   G VIGK+ A D D  D +T SL    + +FS++ +G
Sbjct: 3553 TAFGEEYSGGVIGKIHATDQDVYDTLTYSLDPQMDNLFSVSSTG 3596



 Score = 43.9 bits (102), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 62/225 (27%), Positives = 109/225 (48%), Gaps = 19/225 (8%)

Query: 13   LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVT---T 69
            L+VRA   D   R+  A+++++    +    +FS + Y+++  EN     +L  V     
Sbjct: 3095 LLVRAT--DGGGRFCEASIVLTLEDVNDNAPEFSADPYAITVFENTEPGTLLTRVQATDA 3152

Query: 70   NKPRDLRVKYWLSNDYGERFSISR-QGDISLMQCLDYETEDSYRFTVYATD----TLMTT 124
            +   + ++ Y L +    +FSI+   G I L + LD E +  Y  ++ A D      +TT
Sbjct: 3153 DAGLNRKISYSLIDSADGQFSINELSGIIQLEKPLDRELQAVYTLSLKAVDHGLPRRLTT 3212

Query: 125  SATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAA--DGDKGDRVTLS 182
            + TV +SV+++ND  P F Y +Y   +      D+  G+ + +V AA  D +    +T S
Sbjct: 3213 TGTVVVSVLDINDNPPVFEYREYGATVSE----DILVGTEVLQVYAASRDIEANAEITYS 3268

Query: 183  -LRGPYEKMFSIND-SGHISIVD-LSALNTSTIQLVVVATDTGNP 224
             + G     FSI+  +G + I++ L   ++    L V ATD G P
Sbjct: 3269 IISGNEHGKFSIDSKTGAVFIIENLDYESSHEYYLTVEATDGGTP 3313



 Score = 42.4 bits (98), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 54/191 (28%), Positives = 85/191 (44%), Gaps = 30/191 (15%)

Query: 56   ENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYG-ERFSISRQ-GDISLMQCLDYETEDS 110
            E  PV  +++TV     +  RD  ++Y + +  G   F I  + G I     LD E+   
Sbjct: 1045 EGAPVGSLVMTVAAQDEDAGRDGEIRYSIRDGSGVGVFRIGEETGVIETSDRLDRESTSH 1104

Query: 111  YRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSV-IG 166
            Y  TV+ATD     +++   + I V +VND  P+   P   ++ P I   + +P  V + 
Sbjct: 1105 YWLTVFATDQGVVPLSSFIEIYIEVEDVNDNAPQTSEP---VYYPEI--MENSPKDVSVV 1159

Query: 167  KVEAADGDKGDRVTLSLRGPYEKMFSINDSGHISIVDLSALNTSTIQ-----------LV 215
            ++EA D D      L+ R     + S N  G  SI   + L T+T +           L 
Sbjct: 1160 QIEAFDPDSSSDDKLTYR-----ITSGNPQGFFSIHPKTGLITTTSRKLDREQQDEHILE 1214

Query: 216  VVATDTGNPPR 226
            V  TD G+PP+
Sbjct: 1215 VTVTDNGSPPK 1225



 Score = 40.0 bits (92), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 42/129 (32%), Positives = 56/129 (43%), Gaps = 14/129 (10%)

Query: 92   SRQGDISLMQCLDYETEDSYRFTVYATDTLM---TTSATVNISVVNVNDWDPRFRYPQYE 148
            S  G ISL++ LDYE    +   V A D  M   ++   V + V ++ND  P F    YE
Sbjct: 2337 SSTGLISLLRTLDYERSRQHTILVRAVDGGMPPLSSEVIVTVDVTDLNDNLPLFEQQIYE 2396

Query: 149  LFL-PHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSINDSGHISIVDL 204
              +  H P      G  +  V+A D D  D   L    L G   K F I+  G   IV L
Sbjct: 2397 ARISEHAPH-----GHFVTCVKAYDADSSDVGKLQYSILSGNDHKHFVID--GATGIVTL 2449

Query: 205  SALNTSTIQ 213
            S L   T++
Sbjct: 2450 SNLRRHTLK 2458


>gi|326431776|gb|EGD77346.1| PRCDH1 protein [Salpingoeca sp. ATCC 50818]
          Length = 9674

 Score = 61.6 bits (148), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 58/176 (32%), Positives = 88/176 (50%), Gaps = 25/176 (14%)

Query: 60   VNYVLLTVTTNKPRDLRVKYWLSNDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYAT 118
            V+Y LL+V  N    +             FS+ +  G ++L++ LDYE +D+Y   V A+
Sbjct: 3458 VSYALLSVNGNTSVHMSA-----------FSVNATTGIVTLVEPLDYEVQDTYELRVQAS 3506

Query: 119  DTLM----TTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGD 174
            D+      T + T+ I+V NVND  P F + Q    +     A    GS IG V+A DGD
Sbjct: 3507 DSATPVPNTATTTITIAVGNVNDHKPVFTHTQMSASVTDTASA----GSAIGTVKATDGD 3562

Query: 175  KGDRVTLSL-RGPYEKMFSINDSGHI---SIVDLSALNTSTIQLVVVATDTGNPPR 226
             GD V  ++  G     F ++ +  +   ++  L A + ST  L+V ATDTG PP+
Sbjct: 3563 -GDLVLFNIVGGDAGSAFRVDPTTGVIVRALGPLCAADKSTYNLIVRATDTGTPPQ 3617



 Score = 58.5 bits (140), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 65/238 (27%), Positives = 113/238 (47%), Gaps = 23/238 (9%)

Query: 13  LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTT--- 69
           LVV A  +    R   ATL +S A  +  +  FS++ Y+    E+   N  ++ V     
Sbjct: 641 LVVTATDHGVPARTDTATLTISIANVNDLDPVFSQDRYNQYLPESTETNRFVIQVVAAEN 700

Query: 70  NKPRDLRVKYWLSNDYGER-FSI-------SRQGDISLMQCLDYETEDSYRFTVYATDTL 121
           ++  + RV+Y ++N   +  F I       S  G+I  ++ LDYE +  +  TV ATD  
Sbjct: 701 DQGSNSRVQYNITNGNDDNMFRIDTVSQAGSMVGNIYAVRALDYENKTQHTLTVTATDFG 760

Query: 122 M---TTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDR 178
           +   +++A VN+ V+++ND  P+F+   Y   +    L  +   +++G+ +A D D G  
Sbjct: 761 VPPRSSTAQVNVYVLDINDNTPQFQRRSYAFNV----LETIKRNTLVGEFQATDRDSGLN 816

Query: 179 VTLSLR--GPYEKMFSINDSGHISIVDLSALN---TSTIQLVVVATDTGNPPRQASVP 231
             L+ R        F+I ++    +V LS ++    S   + V A D G P R+  VP
Sbjct: 817 AQLTYRIVNGSSGHFNIPNNREGKMVALSGIDYEVKSQYTVYVEAKDEGAPSRRDVVP 874



 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 59/195 (30%), Positives = 90/195 (46%), Gaps = 19/195 (9%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKP---RDLRVKYWLSNDYGERFSISRQGD----I 97
           F+  E +V+  EN  +  VL T+         + ++   L N     FS+S Q +    +
Sbjct: 465 FATQERTVTWRENATIGTVLTTINVTDADVGANAQLSASLLNSDISLFSVSVQSNAVVVL 524

Query: 98  SLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLA 157
            L   LDY+T  S+  T+  TD + T  A V + V++VND  P F    Y   +      
Sbjct: 525 QLTGALDYDTVTSHTVTIQVTDGVHTAQAVVTVQVLDVNDNSPVFERESYATRVAE---- 580

Query: 158 DLTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSIN----DSGHISIVDLSALNTST 211
           +   G++   V A D D G+  RVT +L  P    F+I+        +++ D  A++TS 
Sbjct: 581 NSDTGTIALIVTATDADSGENGRVTYALTPPSTD-FAIDATTGVVTTLTVFDAEAISTS- 638

Query: 212 IQLVVVATDTGNPPR 226
             LVV ATD G P R
Sbjct: 639 FNLVVTATDHGVPAR 653



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 62/208 (29%), Positives = 94/208 (45%), Gaps = 29/208 (13%)

Query: 43   LQFSKNEYSVSALENLPVNYVLLTVTTNKPR-DLRVKYWLSNDYGERFSIS-RQGDISLM 100
            LQF+    +V   EN P+  V  TV    P  D +V Y +  D    F++    G + + 
Sbjct: 1728 LQFADG-LTVELPENTPLGSVAYTVQATDPDVDDQVTYAIQGDDAVFFAMDPLSGSLLVS 1786

Query: 101  QCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYEL-FLPHIPLADL 159
               D+ET      TV ATD + T +AT+NI + +VND  P F      +  L ++P    
Sbjct: 1787 APFDFETAPLLSLTVMATDGVHTVTATLNIDISDVNDHVPVFNDTDITVNMLENVPA--- 1843

Query: 160  TPGSVIGKVEAADGDKG--DRVTLSLRGPY-EKMFSIN-DSGHISIVDLSALNTSTI--- 212
              G+++  V A D D G    VT S+ G   E  F++   +G +       L TS +   
Sbjct: 1844 --GTLVASVFATDQDSGALGNVTYSISGATDEGFFTVGRTTGQL-------LRTSKVVSY 1894

Query: 213  ------QLVVVATDTGNPPRQASVPAIM 234
                   L + A D G+PP +A +PA +
Sbjct: 1895 DERRVLTLNINAQDGGDPPGRAVLPATV 1922



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 62/236 (26%), Positives = 102/236 (43%), Gaps = 46/236 (19%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDL----RVKYWL-SNDYGERFSISRQ-GDIS 98
            FSK +++ S  E+      LLTV    P DL    +V+Y + S +    FS+ R  G+++
Sbjct: 4777 FSKTQFTASIPESTAAGSSLLTVLARDP-DLGAGGQVRYSIVSGNDDAAFSLDRATGELT 4835

Query: 99   LMQCLDYETEDSYRFTVYATDTL---MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIP 155
            L + LDYE   +    + A+D     +T S +V I+V +VND  P F     + F+ H+ 
Sbjct: 4836 LSKMLDYEAATTRDLQILASDGGTPPLTRSGSVRITVTDVNDNPPVFE----QAFVAHVA 4891

Query: 156  LADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSI-----------NDSGHISI 201
              ++    ++ +V+A D D G    +    + G  +  FSI           N SG+  +
Sbjct: 4892 EDEVADVDLV-QVQAVDADTGSNAQIVYSIVAGNEQNFFSIDAATGMLSFNANASGNAPV 4950

Query: 202  VD-----------------LSALNTSTIQLVVVATDTGNPPRQASVPAIMHFPEAI 240
            +D                 +++ N +T   V V      PPR  S P     PE +
Sbjct: 4951 LDREQRTTYHVVVLARDPVVASFNDTTAVTVRVTDVNDEPPRFPSHPLRFRVPEQV 5006



 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 48/147 (32%), Positives = 68/147 (46%), Gaps = 10/147 (6%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTTNKPR---DLRVKYWLSNDYGERFSISRQGDISLM 100
            QF+K  ++ S  EN+ V+  +LT          + ++ + LSN  G        G IS  
Sbjct: 1207 QFNKTMFTASTPENVAVHVPILTAGATDADAGANAQLVFSLSNANGTFEVDVTTGAISAA 1266

Query: 101  QCLDYETEDSYRFTVYATDTLMTT---SATVNISVVNVNDWDPRFRYPQYELFLPHIPLA 157
              LDYET  +Y F V+  D  +     +ATV I+V + ND  P F    Y   +  I   
Sbjct: 1267 VPLDYETRRTYAFNVHVEDRGVPARRDTATVVITVTDSNDNAPAFAQMTYVGAVSDIAAG 1326

Query: 158  DLTPGSVIGKVEAADGDKGDRVTLSLR 184
                GS I  V A D D+GD +T S+R
Sbjct: 1327 ----GSTILTVSATDADEGDTITYSIR 1349



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 50/186 (26%), Positives = 85/186 (45%), Gaps = 14/186 (7%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGERFSISRQGDISLMQCLD 104
            F+ + Y+    E+  +   + TV TN+           N  G+    +  G I+LM  + 
Sbjct: 3740 FTSSRYTADLAESASIGTTVATVATNRTGIASFSITGGNSAGKFAVDANSGAITLMSRVC 3799

Query: 105  YETEDSYRFTVYA---TDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTP 161
              +ED+Y   V A   T   + +   V++SVV  N   P F   QY + +        + 
Sbjct: 3800 AASEDAYSLQVQAQSKTRPDLQSYTLVDVSVVPANTAAPAFSQAQYSVNVSETG----SV 3855

Query: 162  GSVIGKVEAADGDKGDRVTLSLRGPYEK-MFSIN-DSGHISIV-----DLSALNTSTIQL 214
            GSV+ +++A D D  D VT  + G     +F+IN ++G +++V     D+S+   +   L
Sbjct: 3856 GSVLLQLQATDADCRDAVTYRITGGNSNGLFAINRETGELAVVQPLNADVSSGGAAQHTL 3915

Query: 215  VVVATD 220
             V ATD
Sbjct: 3916 TVAATD 3921



 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 62/231 (26%), Positives = 105/231 (45%), Gaps = 20/231 (8%)

Query: 47   KNEYSVSAL-ENLPVNYVLLTVTTNKPR-DLRVKYWLSNDYGER--FSISRQGDISLMQC 102
             NE   +AL E LP + ++ T++   P     V Y +    G    F I+  G +     
Sbjct: 2578 ANELPSAALQEGLPSDTLVTTISAVDPDCGDSVLYSIVGGTGTSRWFRINSNGQLLTTGP 2637

Query: 103  LDYETEDSYRFTVYATDTLMTT----SATVNISVVNVNDWDPRFRYPQYELFLPHIPLAD 158
             + E   S+   V   D         S  V +++++VN++DP F  P Y + +    +  
Sbjct: 2638 TNREEHTSFDVVVRVQDDATPDPAFDSVVVKVTILDVNEFDPAFSLPLYSVSV----VET 2693

Query: 159  LTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSINDS-GHISIVDLSALN-TSTIQ 213
            L  G    +VEA D D  D   ++   + G    +F+IN + G IS      LN  S+  
Sbjct: 2694 LAQGMPFLQVEATDSDACDTCHITYSIVDGDDAGVFAINTTTGEISRQRNLCLNDQSSYT 2753

Query: 214  LVVVATDTGNPPRQASVPAIMHFPEAIVQQASSKLNSGTSSTVLIILGVVL 264
            L+V A+D G+P R+ASVP ++   + ++  A +     TS+T  ++ G  +
Sbjct: 2754 LLVEASDNGSPARKASVPVLI---DVLLGDAHAPAFPSTSATASVVEGATV 2801



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 59/192 (30%), Positives = 90/192 (46%), Gaps = 18/192 (9%)

Query: 76   RVKYWL-SNDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNI 130
            RV Y + S +  + F + +  G + L + LD+ET   +   V A+D+   + TT  T  I
Sbjct: 5134 RVTYAIVSGNVDDTFELDADTGALWLRKSLDFETRSQFSLNVSASDSGTPVHTTYITAII 5193

Query: 131  SVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDK-GDRVTLSLRGPYEK 189
             V +VND  P F    YE+ +      D + G +  ++ A + D     V  S+      
Sbjct: 5194 FVADVNDNAPVFNQTSYEVHVSE----DASVGDLALQLVATERDTVATTVMYSIALGSRG 5249

Query: 190  MFSINDS-GHISIVDLSALNTSTI---QLVVVATDTGNPPRQASVPAIMHFPEAIVQQAS 245
             F+IN S G I++   SAL+  T    QL+V ATD G PP   SV   +   +  V   +
Sbjct: 5250 DFAINASTGAITVA--SALDRETFATYQLLVQATDNGMPPNVGSVEVTIRIDD--VNDNT 5305

Query: 246  SKLNSGTSSTVL 257
                SGT++T L
Sbjct: 5306 PAFPSGTATTSL 5317



 Score = 48.9 bits (115), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 62/229 (27%), Positives = 107/229 (46%), Gaps = 26/229 (11%)

Query: 45   FSKNEYSVSALENLPVNYVLLTV--TTNKPRDLRVKYWLSNDYGERFSISRQ-GDISLMQ 101
            FS+ +YSV+  E   V  VLL +  T    RD         +    F+I+R+ G+++++Q
Sbjct: 3840 FSQAQYSVNVSETGSVGSVLLQLQATDADCRDAVTYRITGGNSNGLFAINRETGELAVVQ 3899

Query: 102  CLDYETEDS----YRFTVYATDTLM----TTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
             L+ +        +  TV ATD       T++ATV ++V+NVN + P F       F   
Sbjct: 3900 PLNADVSSGGAAQHTLTVAATDDFASSPRTSTATVLVTVLNVNQYAPVFAATYSGTFADS 3959

Query: 154  IPLADLTPGSVIGKVEAADGDKGDRVTLSL-RGPYEKMFSIND-SGHISIVD-LSALNTS 210
            +     + G+ +  V A D D GD +  ++  G    +F+I+  +G +++   + +   S
Sbjct: 3960 V-----STGTELVLVGATDAD-GDNIAYAITSGNTGNVFAIDAVTGSLTLAAPVCSRTQS 4013

Query: 211  TIQLVVVATDTGNP-PRQASVPAIMHFPEA-----IVQQASSKLNSGTS 253
            +  LVV ATD G P  R A     + F  +     + +QAS    + +S
Sbjct: 4014 SYTLVVTATDDGQPEARSAGTVVQLSFSASNAASPVFEQASYSFTADSS 4062



 Score = 48.1 bits (113), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 61/208 (29%), Positives = 91/208 (43%), Gaps = 23/208 (11%)

Query: 12   TLVVRAIQYDNQD---RYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVT 68
            + V+R    D Q    R + A L+V  A  +     FS+  YS    E +     +LTV 
Sbjct: 4528 SFVLRIQASDEQTPVRRVSTAPLVVVIADANDSPPVFSQASYSADVQETIAAGTTVLTVE 4587

Query: 69   T-----NKPRDLRVKYWLSNDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDTLM 122
                   + R +R      N  G R++I +  G I+  Q L    +  Y  TV A++   
Sbjct: 4588 AVDGDRTQARPVRYTITTGNALG-RWAIDTVTGAITSTQALCAADQSVYTLTVVASEGAF 4646

Query: 123  -----TTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGD 177
                 +TS TV ++V+NVN+  P+F     +L +     AD   G V+  V A D D GD
Sbjct: 4647 GTGGQSTSVTVTLTVLNVNNHAPQFPVATLQLNVSE-GAAD---GHVVTTVAATDADCGD 4702

Query: 178  RVTLS---LRGPYEKMFSINDS-GHISI 201
               L+   + G     F+I+ S G ISI
Sbjct: 4703 TAALTYSIVSGNVADAFAIDPSTGVISI 4730



 Score = 47.4 bits (111), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 59/203 (29%), Positives = 91/203 (44%), Gaps = 22/203 (10%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGERFSISRQGDISLMQ 101
           F +  Y+    EN     + L VT    +   + RV Y L+    +    +  G ++ + 
Sbjct: 569 FERESYATRVAENSDTGTIALIVTATDADSGENGRVTYALTPPSTDFAIDATTGVVTTLT 628

Query: 102 CLDYET-EDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLA 157
             D E    S+   V ATD      T +AT+ IS+ NVND DP F   +Y  +LP     
Sbjct: 629 VFDAEAISTSFNLVVTATDHGVPARTDTATLTISIANVNDLDPVFSQDRYNQYLPE---- 684

Query: 158 DLTPGSVIGKVEAADGDKG--DRVTLSL-RGPYEKMFSIN---DSGHI--SIVDLSAL-- 207
                  + +V AA+ D+G   RV  ++  G  + MF I+    +G +  +I  + AL  
Sbjct: 685 STETNRFVIQVVAAENDQGSNSRVQYNITNGNDDNMFRIDTVSQAGSMVGNIYAVRALDY 744

Query: 208 -NTSTIQLVVVATDTGNPPRQAS 229
            N +   L V ATD G PPR ++
Sbjct: 745 ENKTQHTLTVTATDFGVPPRSST 767



 Score = 47.0 bits (110), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 63/245 (25%), Positives = 106/245 (43%), Gaps = 36/245 (14%)

Query: 15  VRAIQYDNQDRYALATLIVSKAGTSLREL----------------QFSKNEYSVSALENL 58
           VRA+ Y+N+ ++ L T+  +  G   R                  QF +  Y+ + LE +
Sbjct: 739 VRALDYENKTQHTL-TVTATDFGVPPRSSTAQVNVYVLDINDNTPQFQRRSYAFNVLETI 797

Query: 59  PVNYVLLTV-TTNKPRDL--RVKYWLSNDYGERFSI--SRQGDISLMQCLDYETEDSYRF 113
             N ++     T++   L  ++ Y + N     F+I  +R+G +  +  +DYE +  Y  
Sbjct: 798 KRNTLVGEFQATDRDSGLNAQLTYRIVNGSSGHFNIPNNREGKMVALSGIDYEVKSQYTV 857

Query: 114 TVYATDTLMTTS---ATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEA 170
            V A D    +      V I+V + ND  P F    Y   +P     +L  G V   V A
Sbjct: 858 YVEAKDEGAPSRRDVVPVYITVNDTNDNPPIFPKTNYSCVIPE----NLPAGQVCTTVFA 913

Query: 171 ADGDKGDR----VTLSLRGPYEKMFSIN-DSGHISIVD-LSALNTSTIQLVVVATDTGNP 224
            D DK +     VT +L    + +F+++ D+G ++  + L     S   L++ A D G P
Sbjct: 914 TDADKANTPNSFVTHTLLN-NDDVFTVDPDTGLVTTTNPLDFALQSRFSLIISAMDHGTP 972

Query: 225 PRQAS 229
           P  AS
Sbjct: 973 PLTAS 977



 Score = 43.5 bits (101), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 45/139 (32%), Positives = 62/139 (44%), Gaps = 14/139 (10%)

Query: 95   GDISLMQCLDYETEDSYRFTVYATDTLMTT------SATVNISVVNVNDWDPRFRYPQYE 148
            G++ +   + Y    SY  TV ATD   +T        T+ I+V N ND  P     Q  
Sbjct: 2846 GEVFVASAIHYADASSYTLTVRATDEGDSTHPPEFDELTLTITVNNTNDNAPVLSLGQAS 2905

Query: 149  LFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS-LRGPYEKMFSINDS-GHISIVD-LS 205
            + L      D + G+ +    A D D GD V  S + G  +  F+I+ S G I++   L 
Sbjct: 2906 VTLSE----DASTGTAVTTASATDAD-GDAVAFSFVSGNADNAFAIDASTGAITVAAPLC 2960

Query: 206  ALNTSTIQLVVVATDTGNP 224
            A    T  LVV ATD G P
Sbjct: 2961 ASLLDTYTLVVRATDDGEP 2979



 Score = 42.4 bits (98), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 40/172 (23%), Positives = 72/172 (41%), Gaps = 8/172 (4%)

Query: 14   VVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPR 73
            V+ A+  D   R  L  + ++K   +    QFS+N+Y+VS  E      VL TV +    
Sbjct: 4115 VLDAVATDAGGRSTLVEVQITKQAPAPNTPQFSQNKYTVSVPETTATGSVLTTVASATAG 4174

Query: 74   DLRVKYWLSNDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDTL---MTTSATVN 129
                    S +    F + +  G ++L+      T  +Y   +   D+    +   A ++
Sbjct: 4175 TTYTYTIASGNDANVFDLGASTGAVTLLVAQCARTAPAYSLVLEIRDSRFDGLVGYAVLD 4234

Query: 130  ISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTL 181
            +++ NVND  P F      + +P     +   G+ + +  A D D GD + L
Sbjct: 4235 VTISNVNDNAPTFSPATLTVTVPE----NTAMGTFVLQATATDADCGDALGL 4282



 Score = 42.0 bits (97), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 46/190 (24%), Positives = 75/190 (39%), Gaps = 29/190 (15%)

Query: 89   FSISRQGDISLMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYP 145
            F + + G + L   +DYE++ +Y F V   D      T S T+ ++V++ ND  P F   
Sbjct: 5360 FELRKDGGLYLKTQVDYESQTTYSFGVSMRDHGVPARTGSGTITVNVLDANDNAPVFGQS 5419

Query: 146  QYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSGHISI---- 201
             +   L          G+ I ++ A D D G    L        + S +  G++S+    
Sbjct: 5420 PFVATLGRAAAV----GTPIFQINATDADSGPNALLRF-----SLVSTSHPGYVSLDPAT 5470

Query: 202  ------VDLSALNTSTIQLVVVATDTGNPPRQAS-------VPAIMHFPEAIVQQASSKL 248
                    L     + +QL V+A D G P  Q         V      P     Q S+ +
Sbjct: 5471 GVLTLTRSLCGFTDAAVQLSVMARDGGIPVMQTQGFVNVRVVEENTAAPAFNQTQVSTSI 5530

Query: 249  NSGTSSTVLI 258
            +SG  + VL+
Sbjct: 5531 SSGAKAGVLV 5540



 Score = 40.8 bits (94), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 64/242 (26%), Positives = 96/242 (39%), Gaps = 48/242 (19%)

Query: 12  TLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNK 71
           TLV+ A       R    TL +     +    QF+K  Y+ + +ENL     +L V  + 
Sbjct: 231 TLVIEARDGGTPTRTGNTTLFIEVTDVNDNSPQFTKASYTANVIENLDAGTSVLVVEAD- 289

Query: 72  PRDL------RVKYWLSNDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDT-LMT 123
             DL       V+Y L    G  F I +  G I+    LD E + S+  TV A D  + +
Sbjct: 290 --DLDNGLNGEVRYSLVGS-GFPFVIGAATGQITTTASLDREQQPSWTLTVEARDRGVPS 346

Query: 124 TSATVN--ISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTL 181
            SATV   I V +VND  P+F        LP+                + +G+ G R + 
Sbjct: 347 LSATVQVVIGVTDVNDHVPQF------FNLPY--------------ACSINGETGPRASS 386

Query: 182 SLRGPYEKMFSINDSG--------------HISIVDLSALNTSTIQLVVVATDTGNPPRQ 227
           +++     M+ +  +G               +  V  + L   TI L V A D+G PP  
Sbjct: 387 TVKTHPINMWRLPCAGLASKWHKACDHHVHSLCFVLHTPLTHDTIALTVTARDSGTPPAS 446

Query: 228 AS 229
            S
Sbjct: 447 NS 448



 Score = 38.9 bits (89), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 36/124 (29%), Positives = 57/124 (45%), Gaps = 11/124 (8%)

Query: 113  FTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAAD 172
             TV ATD++ T +ATV I+V N N  DP      Y + +  +      PG  + +V A D
Sbjct: 4427 LTVQATDSVDTATATVTINVSNENLHDPVLSVDSYPIVVSEL----AGPGEFVAQVSATD 4482

Query: 173  GDKGDRVTLSLR-----GPYEKMFSI-NDSGHISIV-DLSALNTSTIQLVVVATDTGNPP 225
             D GD   ++          +  F+I N +G + ++  L     S+  L + A+D   P 
Sbjct: 4483 EDCGDTEAIAFSIISGDNATDPHFTIDNSTGVVRLLRSLDREERSSFVLRIQASDEQTPV 4542

Query: 226  RQAS 229
            R+ S
Sbjct: 4543 RRVS 4546



 Score = 37.7 bits (86), Expect = 9.5,   Method: Compositional matrix adjust.
 Identities = 47/158 (29%), Positives = 65/158 (41%), Gaps = 33/158 (20%)

Query: 95   GDISLMQCLDYE--TEDSYRFTVYATDTL----MTTSATVNISVVNVNDWDPRFRYPQYE 148
            G + L+Q +DYE  ++ ++ FTV ATD       TT    ++SV++VND  P F    Y 
Sbjct: 8874 GSVHLLQTVDYEVASQRTFNFTVSATDNSPPWPRTTLKEYSVSVIDVNDNAPVFSPSVYG 8933

Query: 149  LFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKM-----------------F 191
              +      D T    + +V A D D       +L G   K                  F
Sbjct: 8934 ARISVDSPRDTT----VLRVTATDADSN-----TLAGGQNKALTYSVEVVSSGSQPTDGF 8984

Query: 192  SINDSGHISIVDLSALNTS-TIQLVVVATDTGNPPRQA 228
             I+  G I        + S TI+LVV ATD G P   A
Sbjct: 8985 GISQEGVIYTTGTQTRSLSDTIELVVTATDGGTPALSA 9022


>gi|91090474|ref|XP_968232.1| PREDICTED: similar to cadherin [Tribolium castaneum]
          Length = 3246

 Score = 61.6 bits (148), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 61/212 (28%), Positives = 99/212 (46%), Gaps = 25/212 (11%)

Query: 44  QFSKNEYSVSALENL-----PVNYVLLTVTTNKPRDLRVKYWL-SNDYGERFSI-SRQGD 96
           QFS+  Y+V+  E++     PV   +     ++  +  ++Y + S +   +F+I S  GD
Sbjct: 518 QFSERTYTVALDEDIDWTSNPVIAHIKATDADQGNNAAIRYAIISGNTQSQFAIDSLTGD 577

Query: 97  ISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
           +SL++ LDYET  SYR  + A D      + +  + I+V +VND  PRF    Y      
Sbjct: 578 VSLVKPLDYETLRSYRLVIRAQDGGSPARSNTTQLLINVKDVNDNAPRF----YTSLFQE 633

Query: 154 IPLADLTPGSVIGKVEAADGDKGD----RVTLSLR---GPYEKMFSINDSGHISIV---- 202
               +   G  I KV+A D D+G     + T++ R   G   + F +    H   +    
Sbjct: 634 SIQENAPAGYSIVKVQAYDADEGPNADIKYTIAPRDSIGASTEDFPLTVDSHTGWITTTK 693

Query: 203 DLSALNTSTIQLVVVATDTGNPPRQASVPAIM 234
           +L   + S     V+ATD G PP+ AS   I+
Sbjct: 694 ELDREDQSKFMFQVIATDQGTPPQSASASVII 725



 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 66/211 (31%), Positives = 100/211 (47%), Gaps = 16/211 (7%)

Query: 27  ALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVT-TNKPRDLRVKYWLSN-D 84
           A A++I++    +  +  F    Y     E+ P    + TVT T+   D R+ Y L+N +
Sbjct: 719 ASASVIITVQDVNDNDPVFEPKIYESVVSEDDPPGTPVATVTATDADEDTRLHYELTNGN 778

Query: 85  YGERFSISRQ---GDISLMQCLDYETEDSYRFTVYATDT-LMTTSATVNISVVNVNDWDP 140
              RF+I+ Q   G I++ Q LDY+ E  Y  TV A+D+   T +ATV +++ + N++ P
Sbjct: 779 TRGRFAITSQNGRGVITVAQPLDYKQEKRYILTVTASDSGGRTDTATVYVNITDANNFAP 838

Query: 141 RFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSL--RGPYEKMFSIN-- 194
            F    Y   +      D   G+ +  V A D D G   ++T SL   G +   F+IN  
Sbjct: 839 VFENAPYTASV----FEDAAVGTTVLVVSATDNDVGLNAQITYSLGEDGDHPAEFTINPQ 894

Query: 195 DSGHISIVDLSALNTSTIQLVVVATDTGNPP 225
               I+   L    TS   L V A D GNPP
Sbjct: 895 TGAIITTRTLDRETTSGYLLTVTARDGGNPP 925



 Score = 47.0 bits (110), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 62/245 (25%), Positives = 105/245 (42%), Gaps = 19/245 (7%)

Query: 6    DFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLL 65
            D+ Q    ++     D+  R   AT+ V+    +     F    Y+ S  E+  V   +L
Sbjct: 801  DYKQEKRYILTVTASDSGGRTDTATVYVNITDANNFAPVFENAPYTASVFEDAAVGTTVL 860

Query: 66   TVTTNKPR---DLRVKYWLS--NDYGERFSISRQ-GDISLMQCLDYETEDSYRFTVYATD 119
             V+        + ++ Y L    D+   F+I+ Q G I   + LD ET   Y  TV A D
Sbjct: 861  VVSATDNDVGLNAQITYSLGEDGDHPAEFTINPQTGAIITTRTLDRETTSGYLLTVTARD 920

Query: 120  T---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG 176
                 ++ +  V IS+ +VND  P F+   Y   +    L D   G+ + +V A D D G
Sbjct: 921  GGNPPLSDTTDVEISLTDVNDNYPVFKQAAYSGSV----LEDALVGTSVVQVSATDADVG 976

Query: 177  --DRVTLSL--RGPYEKMFSINDSGHISIVD--LSALNTSTIQLVVVATDTGNPPRQASV 230
               +++ SL  +   +  F I+ +  +   +  L   + +  +L   A D G+P   +SV
Sbjct: 977  LNGKISYSLSEKDKEDGSFVIDPTSGVIRTNKGLDRESVAVYELEAYAIDRGSPTLSSSV 1036

Query: 231  PAIMH 235
            P  +H
Sbjct: 1037 PVTIH 1041


>gi|348514466|ref|XP_003444761.1| PREDICTED: protocadherin-11 X-linked-like [Oreochromis niloticus]
          Length = 1232

 Score = 61.6 bits (148), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 55/192 (28%), Positives = 92/192 (47%), Gaps = 16/192 (8%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGERFSISRQ-GDISLM 100
           F + E  +S  EN   +  L+ ++    +   +  + Y LS D  + F+I R+ G +S+ 
Sbjct: 466 FPQPEIQLSIPENNDPSTQLIKISATDADSGHNAEIIYTLSPDAPDGFNIDRRSGILSVG 525

Query: 101 QCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLP-HIPL 156
           + LD E ++ Y FTV A D   T + ++ TV + V ++ND  P F +P+Y  ++P ++PL
Sbjct: 526 KRLDREKQERYSFTVIARDNGSTSLQSNVTVKLIVQDLNDNSPTFTHPEYNFYVPENLPL 585

Query: 157 ADLTPGSVIGKVEAADGDKGDR--VTLSLRGPYEKMFSINDSGHISI-VDLSALNTSTIQ 213
                   +G +   D D GD   VTLS+    +       +G I   +       S+  
Sbjct: 586 Y-----GTVGLITVTDADAGDNAVVTLSILNGKDNFIIDPQTGVIKPNITFDREQQSSYT 640

Query: 214 LVVVATDTGNPP 225
            +V A D G PP
Sbjct: 641 FMVKAVDGGQPP 652



 Score = 48.1 bits (113), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 72/263 (27%), Positives = 107/263 (40%), Gaps = 43/263 (16%)

Query: 11  ITLVVRAIQYDNQDRYALATLIVSKAGTSLRE---------------LQFSKNEYSVSAL 55
           I  V + +  + Q+RY+   +      TSL+                  F+  EY+    
Sbjct: 521 ILSVGKRLDREKQERYSFTVIARDNGSTSLQSNVTVKLIVQDLNDNSPTFTHPEYNFYVP 580

Query: 56  ENLPV--NYVLLTVTTNKPRDLRVKYWLSNDYGERFSISRQ-GDISLMQCLDYETEDSYR 112
           ENLP+     L+TVT     D  V      +  + F I  Q G I      D E + SY 
Sbjct: 581 ENLPLYGTVGLITVTDADAGDNAVVTLSILNGKDNFIIDPQTGVIKPNITFDREQQSSYT 640

Query: 113 FTVYATDTLMTTS---ATVNISVVNVNDWDPRFRYPQ----YELFLPHIPLADLTPGSVI 165
           F V A D     S   A V I+VV+VND  P F  P     Y+L          TPG+V+
Sbjct: 641 FMVKAVDGGQPPSSSYAKVTINVVDVNDNRPVFVIPSSNYSYDLVR-----TTTTPGAVV 695

Query: 166 GKVEAADGDKGDRVTLSL----------RGPYEKMFSIND-SGHISIVD-LSALNTSTIQ 213
            +V A D D G    L            R     +F+I+  +G+I++ + + A +    +
Sbjct: 696 TRVFAIDNDTGMNAELQYSLISSIIITSRVSPRGLFAIDKTTGNITLQEKIVAADQGLHR 755

Query: 214 LVVVATDTGNPPRQASVPAIMHF 236
           LVV   D G P    ++ A++H 
Sbjct: 756 LVVKVKDLGQPESLHAI-ALVHL 777



 Score = 44.7 bits (104), Expect = 0.072,   Method: Compositional matrix adjust.
 Identities = 55/189 (29%), Positives = 82/189 (43%), Gaps = 20/189 (10%)

Query: 56  ENLPVN-YVLLTVTTNKPRDLRVKYWLSNDYGERFSI----SRQGDISLMQCLDYETEDS 110
           EN P+N  + L   T+K  DL  K     D+   F +    + Q  +     LDYET   
Sbjct: 372 ENAPLNTKIALITVTDKDADLYGKVACYTDHDVPFRLKPVFNDQFLLETAAPLDYETTRE 431

Query: 111 YRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGK 167
           Y   + A+D     + TSA V I + + ND  P F  P+ +L +P     +  P + + K
Sbjct: 432 YAIKIVASDRGTPPLNTSAMVLIKIKDENDNAPIFPQPEIQLSIPE----NNDPSTQLIK 487

Query: 168 VEAADGDKGDRV----TLSLRGPYEKMFSIN-DSGHISIVD-LSALNTSTIQLVVVATDT 221
           + A D D G       TLS   P    F+I+  SG +S+   L           V+A D 
Sbjct: 488 ISATDADSGHNAEIIYTLSPDAP--DGFNIDRRSGILSVGKRLDREKQERYSFTVIARDN 545

Query: 222 GNPPRQASV 230
           G+   Q++V
Sbjct: 546 GSTSLQSNV 554


>gi|345791455|ref|XP_851607.2| PREDICTED: protocadherin-15 isoform 3 [Canis lupus familiaris]
          Length = 1678

 Score = 61.6 bits (148), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 64/241 (26%), Positives = 111/241 (46%), Gaps = 27/241 (11%)

Query: 6   DFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVL- 64
           DF Q   LV++A Q +     A A+L +     + +   F+   Y    LE+ PV   + 
Sbjct: 356 DFHQKFDLVIKAEQDNGHPLPAFASLHIEILDENNQSPYFTMPSYQGYILESAPVGATIS 415

Query: 65  --LTVTT-----------NKPRDLRVKYWLSNDYGERFSISRQG---DISLMQCLDYETE 108
             L +TT              +D  +  +L NDY   F++++ G    ++L+Q +D E +
Sbjct: 416 DSLNLTTPLRIVALDKDIEDTKDPELHLFL-NDYTSVFTVTQTGITRYLTLLQPVDREEQ 474

Query: 109 DSYRFTVYATDTLMTTSAT-VNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGK 167
            +Y F++ A D +  +    VNI V++ ND  P F    Y++++      D++PG  + +
Sbjct: 475 QTYTFSITAFDGVQESEPVIVNIRVMDANDNTPTFPEISYDVYV----YTDMSPGDSVIQ 530

Query: 168 VEAADGDKG--DRVTLSLRGPYEKMFSIND-SGHISIVDLSALNTS-TIQLVVVATDTGN 223
           + A D D+G    +T  +    +  F+IN  SG +++    AL    T  L V A D   
Sbjct: 531 LTAVDADEGPNGEITYDILVGAQGDFAINRTSGLVTVAPGRALTVGRTYALTVQAADNAP 590

Query: 224 P 224
           P
Sbjct: 591 P 591



 Score = 51.2 bits (121), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 71/233 (30%), Positives = 103/233 (44%), Gaps = 26/233 (11%)

Query: 13   LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKP 72
            LVV A       R++  TL +           F+ + Y+V   ENLP     L +   K 
Sbjct: 787  LVVVATDGAVHPRHSTLTLAIKVLDIDDNSPVFTNSTYTVVVEENLPAGTTFLQIEA-KD 845

Query: 73   RDL--RVKYWLSNDYGERFSISR--QGDISLMQCLDYET----EDSYRFTVYATD---TL 121
             DL   V Y + +   + F       G++SL++ LDYE+    E S  F V A D   T+
Sbjct: 846  VDLGANVSYRIRSPEVKHFFALHPFTGELSLLRSLDYESFPEQEASITFLVEAFDIYGTM 905

Query: 122  MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDK----GD 177
                ATV + V ++ND+ P F    Y+  +      D   G+ I  V A D D       
Sbjct: 906  PPGIATVTVIVKDMNDYPPVFSKRIYKGMV----APDAVKGTPITTVYAEDADPPGLPAS 961

Query: 178  RVTL---SLRGPY-EKMFSIN-DSGH-ISIVDLSALNTSTIQLVVVATDTGNP 224
            RV      ++ PY   +F +  DSG  I+ V+L+   T+  +LVVVA D G P
Sbjct: 962  RVRYRVDDVQFPYPASIFDVEEDSGRVITRVNLNEEPTTIFKLVVVAFDDGEP 1014



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 54/193 (27%), Positives = 95/193 (49%), Gaps = 10/193 (5%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGER-FSISRQ-GDISLMQ 101
           +F +  YS+   E + +  VLL +         + Y + N   +R F++S   G ++L +
Sbjct: 615 RFPQLMYSLEISEAMRIGAVLLNLQATDREGDPITYAIENGDPQRVFNLSETTGILTLGK 674

Query: 102 CLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLP-HIPLADLT 160
            LD E+ D Y   V A+D     ++T  ++VV  +        P ++ +LP ++ + +  
Sbjct: 675 ALDRESTDRYILIVTASDGRPDGTSTATVNVVVTDV---NDNAPMFDPYLPRNLSVVEEE 731

Query: 161 PGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDSGHI-SIVDLSALNTSTIQLVVV 217
             + +G+V A D D G   +V  SL G +  +F I  +G I + V L+     + QLVVV
Sbjct: 732 ANAFVGQVRATDPDAGINGQVHYSL-GNFNNLFRITSNGSIYTAVKLNREVRDSYQLVVV 790

Query: 218 ATDTGNPPRQASV 230
           ATD    PR +++
Sbjct: 791 ATDGAVHPRHSTL 803



 Score = 46.2 bits (108), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 57/119 (47%), Gaps = 8/119 (6%)

Query: 76  RVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDTLM---TTSATVNISV 132
           +V Y L N +   F I+  G I     L+ E  DSY+  V ATD  +    ++ T+ I V
Sbjct: 751 QVHYSLGN-FNNLFRITSNGSIYTAVKLNREVRDSYQLVVVATDGAVHPRHSTLTLAIKV 809

Query: 133 VNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMF 191
           ++++D  P F    Y + +      +L  G+   ++EA D D G  V+  +R P  K F
Sbjct: 810 LDIDDNSPVFTNSTYTVVVEE----NLPAGTTFLQIEAKDVDLGANVSYRIRSPEVKHF 864


>gi|449475306|ref|XP_002191783.2| PREDICTED: protocadherin beta-4-like [Taeniopygia guttata]
          Length = 944

 Score = 61.2 bits (147), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 56/200 (28%), Positives = 88/200 (44%), Gaps = 29/200 (14%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRDL----RVKYWLSNDYGER---FSISR-QGD 96
           F++ EY    LEN+P   V+LTV     RD     ++ Y  S   G+    F I    G+
Sbjct: 367 FTQEEYIAQVLENMPEGSVVLTVLATD-RDAGINGKISYQFSQAVGQSDSAFVIDPITGE 425

Query: 97  ISLMQCLDYETEDSYRFTVYATD-TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIP 155
           I L + LD+E  +++  TV A D   ++    V + VV+VND  P      +   +P   
Sbjct: 426 IKLTKPLDFEAVETHELTVRARDGGGLSAICKVLVEVVDVNDNAPELVVSSFSSPIPE-- 483

Query: 156 LADLTPGSVIGKVEAADGDKG----------DRVTLSLRGPYEKMFSINDSGHISIVDLS 205
             +  PG+V+      D D G          D+++ SLR  Y+  + +     +++  L 
Sbjct: 484 --NTVPGTVVALFSVRDRDSGANGKISCALEDQLSFSLRPAYKNYYEL-----VTVSALD 536

Query: 206 ALNTSTIQLVVVATDTGNPP 225
              T    L V A D G+PP
Sbjct: 537 REETPQYILSVTAADAGSPP 556



 Score = 43.9 bits (102), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 58/204 (28%), Positives = 92/204 (45%), Gaps = 26/204 (12%)

Query: 45  FSKNEYSVSALEN-LPVNYVLLTVTTNKPRDL--RVKYWLSNDYG-ERFSIS------RQ 94
           F++  Y++   EN +P  +V      +    L  +V Y L+ + G ER S S        
Sbjct: 577 FNQTSYTMYVRENNVPTVFVGAVSAGDADVGLNAKVTYSLAPEQGAERPSCSCISVNSEN 636

Query: 95  GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFL 151
           G + +++ LDYE       TV A+D     +  + TV + V++ ND  P   YP  +   
Sbjct: 637 GHVFVLRPLDYEHLRQTEVTVSASDAGSPPLRANVTVRLVVLDENDNAPLVLYPAQD--- 693

Query: 152 PHIPLADLTP-----GSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-DSGHISIV 202
                ++L P     G +IGKV A D D G    LS   LR     +FS+   SG + + 
Sbjct: 694 GSPASSELVPVWAEAGYLIGKVVAVDADSGQNSWLSYHLLRATDPGLFSVAVQSGEVRLR 753

Query: 203 D-LSALNTSTIQLVVVATDTGNPP 225
             ++  ++   +LVV+  D G PP
Sbjct: 754 RPVTERDSVKQKLVVLVRDNGKPP 777



 Score = 42.7 bits (99), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 40/144 (27%), Positives = 67/144 (46%), Gaps = 17/144 (11%)

Query: 100 MQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
           +  LD E    Y  +V A D     +T++ T  + + +VND  P F    Y +++     
Sbjct: 532 VSALDREETPQYILSVTAADAGSPPLTSTQTFTVDISDVNDNAPVFNQTSYTMYVRE--- 588

Query: 157 ADLTPGSVIGKVEAADGDKG--DRVTLSL------RGPYEKMFSIN-DSGHISIVD-LSA 206
            +  P   +G V A D D G   +VT SL        P     S+N ++GH+ ++  L  
Sbjct: 589 -NNVPTVFVGAVSAGDADVGLNAKVTYSLAPEQGAERPSCSCISVNSENGHVFVLRPLDY 647

Query: 207 LNTSTIQLVVVATDTGNPPRQASV 230
            +    ++ V A+D G+PP +A+V
Sbjct: 648 EHLRQTEVTVSASDAGSPPLRANV 671


>gi|410974941|ref|XP_003993897.1| PREDICTED: protocadherin-15 isoform 1 [Felis catus]
          Length = 1679

 Score = 61.2 bits (147), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 65/241 (26%), Positives = 111/241 (46%), Gaps = 27/241 (11%)

Query: 6   DFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVL- 64
           DF Q   LV++A Q +     A A+L +     + +   F+   Y    LE+ PV   + 
Sbjct: 361 DFHQKFDLVIKAEQDNGHPLPAFASLHIEILDENNQSPYFTMPSYQGYILESAPVGATIS 420

Query: 65  --LTVTT-----------NKPRDLRVKYWLSNDYGERFSISRQG---DISLMQCLDYETE 108
             L +TT              +D  +  +L NDY   F++++ G    ++L+Q +D E +
Sbjct: 421 DSLNLTTPLRIVALDKDIEDTKDPELHLFL-NDYTSVFTVTQTGITRYLTLLQPVDREEQ 479

Query: 109 DSYRFTVYATDTLMTTSAT-VNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGK 167
            +Y F++ A D +  +    VNI V++ ND  P F    Y++++      D++PG  + +
Sbjct: 480 QTYTFSITAFDGVQESEPVIVNIRVMDANDNTPTFPEISYDVYV----YTDMSPGDSVIQ 535

Query: 168 VEAADGDKGD--RVTLSLRGPYEKMFSIND-SGHISIVDLSALNTS-TIQLVVVATDTGN 223
           + A D D+G    +T  +    +  F+IN  +G I+I    AL    T  L V A D   
Sbjct: 536 LTAVDADEGSNGEITYEILVGAQGDFTINRTTGLITIAQGVALTVGRTYALTVQAADNAP 595

Query: 224 P 224
           P
Sbjct: 596 P 596



 Score = 61.2 bits (147), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 60/195 (30%), Positives = 99/195 (50%), Gaps = 14/195 (7%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGER-FSISRQ-GDISLMQ 101
           +F +  YS+   E + +  VLL +         + Y + N   +R F++S   G ++L +
Sbjct: 620 RFPQLMYSLEISEAMRIGAVLLNLQATDREGDPITYAIENGDPQRVFNLSETTGILTLGK 679

Query: 102 CLDYETEDSYRFTVYATDTL--MTTSATVNISVVNVNDWDPRFRYPQYELFLP-HIPLAD 158
            LD E+ D Y   V A+D     T++ATVN+ V +VND  P F     + +LP ++ + +
Sbjct: 680 ALDRESTDRYILIVTASDGRPDGTSTATVNVLVTDVNDNAPVF-----DPYLPRNLSVVE 734

Query: 159 LTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDSGHI-SIVDLSALNTSTIQLV 215
               + +G+V A D D G   +V  SL G +  +F I  +G I + V L+       +LV
Sbjct: 735 EEANAFVGQVRATDPDAGINGQVHYSL-GNFNNLFRITSNGSIYTAVKLNREVRDYYELV 793

Query: 216 VVATDTGNPPRQASV 230
           VVATD    PR +++
Sbjct: 794 VVATDGAVHPRHSTL 808



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 71/233 (30%), Positives = 103/233 (44%), Gaps = 26/233 (11%)

Query: 13   LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKP 72
            LVV A       R++  TL +           F+ + Y+V   ENLP     L +   K 
Sbjct: 792  LVVVATDGAVHPRHSTLTLAIKVLDIDDNSPVFTNSTYTVIVEENLPAGTTFLQIEA-KD 850

Query: 73   RDL--RVKYWLSNDYGERFSISR--QGDISLMQCLDYET----EDSYRFTVYATD---TL 121
             DL   V Y + +   + F       G++SL++ LDYE+    E S  F V A D   T+
Sbjct: 851  VDLGANVSYRIRSPEVKHFFALHPFTGELSLLRSLDYESFPDQEASITFLVEAFDIYGTM 910

Query: 122  MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDK----GD 177
                ATV + V ++ND+ P F    Y+  +      D   G+ I  V A D D       
Sbjct: 911  PPGIATVTVIVKDMNDYPPVFSKRIYKGMV----APDAVKGTPITTVYAEDADPPGLPAS 966

Query: 178  RVTL---SLRGPY-EKMFSIN-DSGH-ISIVDLSALNTSTIQLVVVATDTGNP 224
            RV      ++ PY   +F +  DSG  I+ V+L+   T+  +LVVVA D G P
Sbjct: 967  RVRYRVDDVQFPYPASIFDVEEDSGRVITRVNLNEEPTTIFKLVVVAFDDGEP 1019



 Score = 43.9 bits (102), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 35/119 (29%), Positives = 55/119 (46%), Gaps = 8/119 (6%)

Query: 76  RVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDTLMT---TSATVNISV 132
           +V Y L N +   F I+  G I     L+ E  D Y   V ATD  +    ++ T+ I V
Sbjct: 756 QVHYSLGN-FNNLFRITSNGSIYTAVKLNREVRDYYELVVVATDGAVHPRHSTLTLAIKV 814

Query: 133 VNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMF 191
           ++++D  P F    Y + +      +L  G+   ++EA D D G  V+  +R P  K F
Sbjct: 815 LDIDDNSPVFTNSTYTVIVEE----NLPAGTTFLQIEAKDVDLGANVSYRIRSPEVKHF 869


>gi|307179930|gb|EFN68065.1| Putative fat-like cadherin-related tumor suppressor-like protein
            [Camponotus floridanus]
          Length = 3508

 Score = 61.2 bits (147), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 62/244 (25%), Positives = 113/244 (46%), Gaps = 31/244 (12%)

Query: 6    DFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLREL--------------QFSKNEYS 51
            DF   +  VV  + Y+ + +Y L             E+              +F+++ Y+
Sbjct: 1054 DFNTGVIYVVDELDYEQKKQYELTVRATDSVSGVYAEVLVSILVLDVNDCPPEFTQDSYN 1113

Query: 52   VSALENLPVNYVLLTVTTNKPR---DLRVKYWLSNDYG---ERFSI-SRQGDISLMQCLD 104
            +S  E  P    +L V++       + +V+Y + ND     + F I + +G I L Q LD
Sbjct: 1114 ISISEAAPFGTSVLRVSSRDNDTGINQQVRYAIQNDTENSTDLFHIDADEGVIFLKQSLD 1173

Query: 105  YETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTP 161
            +ET +S+ FTV A D     ++++A V +SV+++ND  P+F  P Y   L          
Sbjct: 1174 HETHESHHFTVIAMDRGVPSLSSTAHVWVSVIDMNDNPPKFEQPSYTCSLSE----HAER 1229

Query: 162  GSVIGKVEAADGDKGD-RVTLSLRGPYEKM-FSINDS-GHISIVDLSALNTSTIQLVVVA 218
            G  +  V A+D D  D ++T ++ G  E+  ++I  S G IS++++       + ++ V+
Sbjct: 1230 GQFVTVVSASDPDYVDEKLTYTIVGGNEQQTYNIGQSTGVISLINMQNFGEQKLSMLNVS 1289

Query: 219  TDTG 222
               G
Sbjct: 1290 VTDG 1293



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 58/220 (26%), Positives = 96/220 (43%), Gaps = 21/220 (9%)

Query: 45  FSKNEYSVSALENLPVNY-VLLTVTTNKPRDLRVKYWLSNDYGERFSISR-QGDISLMQC 102
           F  N  SV   E+    + V L   ++K  D      L  D  + F I R  G++ L + 
Sbjct: 177 FKTNNQSVQVTESDQAGFLVALMQASDKDGDALWYDILDGDKRDEFFIGRDNGNVLLAKR 236

Query: 103 LDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPG 162
           LD+ET++ Y  T+  TD + T    + ++V+++ND  P F    Y + +      ++  G
Sbjct: 237 LDWETQNFYNLTIGVTDGVHTALTQLLVTVIDINDHRPEFTESTYRVDISE----NVEEG 292

Query: 163 SVIGKVEAADGDKGDRVTLSLRGPYEK----MFSINDSGHISIVDLSALNTSTIQ---LV 215
             I ++ A D D+  +V  SL     +    +F + DS   SI     L+  TI+   L 
Sbjct: 293 EKILQLHATDEDEDKKVFYSLHAAQTQASLEIFHV-DSVLGSITLNKPLDRETIEEHVLT 351

Query: 216 VVATDTGNPPRQASVPAIM-------HFPEAIVQQASSKL 248
           V+  D G P ++     I+       H PE I +    K+
Sbjct: 352 VMVKDQGTPAKRNYARVIVTVHDHNDHQPEFISEIIQGKV 391



 Score = 51.2 bits (121), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 57/194 (29%), Positives = 96/194 (49%), Gaps = 20/194 (10%)

Query: 45   FSKNEYSVSALENLPVNYVL-LTVTTNKPRDLRVKYWLS--NDYGERFSIS-RQGDISLM 100
            F K  Y+ S LE++ V+  L L++    P + ++ Y ++  ND+ E F++    G I ++
Sbjct: 1005 FDKQFYTDSVLESIEVHSPLALSIQAESPLNRKLIYSITKGNDF-EEFALDFNTGVIYVV 1063

Query: 101  QCLDYETEDSYRFTVYATDTLMTTSATVNIS--VVNVNDWDPRFRYPQYELFLPHIPLAD 158
              LDYE +  Y  TV ATD++    A V +S  V++VND  P F    Y     +I +++
Sbjct: 1064 DELDYEQKKQYELTVRATDSVSGVYAEVLVSILVLDVNDCPPEFTQDSY-----NISISE 1118

Query: 159  LTP-GSVIGKVEAADGDKG--DRVTLSLRGPYEK---MFSIN-DSGHISIVD-LSALNTS 210
              P G+ + +V + D D G   +V  +++   E    +F I+ D G I +   L      
Sbjct: 1119 AAPFGTSVLRVSSRDNDTGINQQVRYAIQNDTENSTDLFHIDADEGVIFLKQSLDHETHE 1178

Query: 211  TIQLVVVATDTGNP 224
            +    V+A D G P
Sbjct: 1179 SHHFTVIAMDRGVP 1192



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 58/214 (27%), Positives = 97/214 (45%), Gaps = 43/214 (20%)

Query: 59   PVNYVLLTVTTN---KPRDLRVKYWLSNDYGERFSISRQ-GDISLMQCLDYETEDSYRFT 114
            P  YVL  + T+   +P + +++++L+ D  ++FS+ R+ G +  +  LD ET+  Y   
Sbjct: 1849 PGAYVLTVLATDYDDEP-NAKLRFYLTGDNNDKFSLDRETGVLKTVGQLDRETQAKYSLM 1907

Query: 115  VYATDTLMTT---SATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAA 171
             +  D    T   S+ + I V ++ND  P+F    Y   LP     D+  G+++ KV A 
Sbjct: 1908 AHVQDRDKPTWECSSQLEILVSDLNDNAPKFTMQTYSSTLPE----DVEVGTLVTKVHAT 1963

Query: 172  DGDKGDRVTLSLRGPYEKMFSIN-------DSGHISI-------------VDLSALNTST 211
            D D G  +   +R  YE + S +       DSG +++             V + AL+  T
Sbjct: 1964 DDDIG--INRKIR--YEFIDSADGHFLIAADSGIVTLAKPLDRETKAMYNVTIQALDQGT 2019

Query: 212  IQLVVVAT-------DTGNPPRQASVPAIMHFPE 238
             QL+ +A+          NPP  AS       PE
Sbjct: 2020 PQLMGIASLIVNVQDINDNPPEFASKIYFAKVPE 2053



 Score = 47.0 bits (110), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 46/150 (30%), Positives = 72/150 (48%), Gaps = 14/150 (9%)

Query: 89   FSISRQGDISLMQCLDYETEDSYRFTVYA-TDTL--MTTSATVNISVVNVNDWDPRFRYP 145
            F+I   G I+L + LD E +D++   V A TD+   +T  A +++ V++ ND  P+F   
Sbjct: 1570 FTIDSHGQITLARPLDRELKDNHLIGVLAETDSSPPLTALAEISLQVLDENDHAPKFESN 1629

Query: 146  QYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR-----GPYEKMFSIND-SGHI 199
             Y + L      ++  G+ I KV A D D G    +        G    +F+++  +G I
Sbjct: 1630 PYAISLAE----NIEEGTSILKVIAHDKDLGSNGEVRYSFGSDIGELANVFAVDAYTGWI 1685

Query: 200  S-IVDLSALNTSTIQLVVVATDTGNPPRQA 228
            S +V L        +  VVATD GNP   A
Sbjct: 1686 STLVQLDKEKQPEYKFQVVATDNGNPKHFA 1715



 Score = 46.2 bits (108), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 51/194 (26%), Positives = 85/194 (43%), Gaps = 24/194 (12%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTTNKPRDL----RVKYWLSNDYGERFSI----SRQG 95
            +F  N Y++S  EN+     +L V  +  +DL     V+Y   +D GE  ++    +  G
Sbjct: 1625 KFESNPYAISLAENIEEGTSILKVIAHD-KDLGSNGEVRYSFGSDIGELANVFAVDAYTG 1683

Query: 96   DISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLP 152
             IS +  LD E +  Y+F V ATD          +V++ + + ND  P F   +YE  + 
Sbjct: 1684 WISTLVQLDKEKQPEYKFQVVATDNGNPKHFARTSVHVKLKDYNDNAPAFVDDRYEATVN 1743

Query: 153  HIPLADLTPGSVIGKVEAADGDKGDRVTLSL---RGPYEKMFSINDSGHISIVDLSALNT 209
               L    PG+V+ K+   D D      +      G     F I  +G + +    +L+ 
Sbjct: 1744 ENAL----PGTVVVKLITIDKDSDVNTPIEFYITSGDPRSQFQIRSTGEVYVA--KSLDR 1797

Query: 210  STI---QLVVVATD 220
             TI   +L ++ TD
Sbjct: 1798 ETIDRYELEIIGTD 1811



 Score = 46.2 bits (108), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 33/107 (30%), Positives = 49/107 (45%), Gaps = 7/107 (6%)

Query: 45   FSKNEYSVSALEN-LPVNYVLLTVTTNKPRDLRVK---YWLSNDYGERFSISRQGDISLM 100
            F  + Y  +  EN LP   V+  +T +K  D+      Y  S D   +F I   G++ + 
Sbjct: 1733 FVDDRYEATVNENALPGTVVVKLITIDKDSDVNTPIEFYITSGDPRSQFQIRSTGEVYVA 1792

Query: 101  QCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDP---RFRY 144
            + LD ET D Y   +  TD        V + V++VND  P   R+RY
Sbjct: 1793 KSLDRETIDRYELEIIGTDGKYVFETKVTVQVLDVNDNPPYCLRYRY 1839



 Score = 45.1 bits (105), Expect = 0.063,   Method: Compositional matrix adjust.
 Identities = 46/147 (31%), Positives = 68/147 (46%), Gaps = 13/147 (8%)

Query: 87   ERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDTL---MTTSATVNISVVNVNDWDPRF 142
            ++F I ++ G I + + LDYE    Y  T+ A D     ++  ATVNI+V + ND  P F
Sbjct: 2088 KKFQINAKTGVIIIAEQLDYERARDYFLTIQAVDGGIPPLSNHATVNITVTDSNDNAPIF 2147

Query: 143  RYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSL---RGPYEKMFSIN-DSGH 198
                Y  F+      D   G  + +V A D D  +   +S    RG  +K FSI+  +G 
Sbjct: 2148 SEVSYRAFV----REDAKIGEKVTQVYANDLDSEENGNISYYIERGDRQKQFSIDRKTGQ 2203

Query: 199  ISIVD-LSALNTSTIQLVVVATDTGNP 224
            I +   L     ++  L V A D G P
Sbjct: 2204 IIVAAPLDREEIASYVLEVHARDNGIP 2230



 Score = 40.0 bits (92), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 36/126 (28%), Positives = 56/126 (44%), Gaps = 17/126 (13%)

Query: 77   VKYWLS-NDYGERFSISRQ-GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNIS 131
            + Y++   D  ++FSI R+ G I +   LD E   SY   V+A D    ++++   VNI 
Sbjct: 2182 ISYYIERGDRQKQFSIDRKTGQIIVAAPLDREEIASYVLEVHARDNGIPMLSSFVMVNIE 2241

Query: 132  VVNVNDWDPRFRYPQYELF------LPHIPL------ADLTPGSVIGKVEAADGDKGDRV 179
            +++ ND  P F  P Y         L H  L      AD+ P +     +   G++GD  
Sbjct: 2242 ILDANDNPPLFSLPNYTAIVQEDKPLGHTVLQFMVTDADIEPNAEPYTFDFRSGNEGDAF 2301

Query: 180  TLSLRG 185
             L   G
Sbjct: 2302 RLEQDG 2307


>gi|291408000|ref|XP_002720205.1| PREDICTED: protocadherin 11 X-linked isoform 6 [Oryctolagus
           cuniculus]
          Length = 1301

 Score = 61.2 bits (147), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 81/280 (28%), Positives = 118/280 (42%), Gaps = 65/280 (23%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGE-------------RFSI 91
           F+ NEY+    ENLP +  +  +T   P           DYGE              F+I
Sbjct: 570 FTHNEYNFYVPENLPRHGTVGLITVTDP-----------DYGENSAVTLSIVDVNDEFTI 618

Query: 92  SRQ-GDISLMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYP-- 145
             Q G I      D E ++SY F V A D      +++A V I+VV+VND  P F  P  
Sbjct: 619 DPQTGVIRPNISFDREKQESYTFYVKAEDGGRVSRSSTAKVTINVVDVNDNKPVFVIPPS 678

Query: 146 --QYELFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIND--SGHI 199
              YEL LP        PG+V+ +V A D D G    +  S+ G   K   I D  SG+I
Sbjct: 679 NYSYELVLPST-----NPGAVVFQVVAVDNDTGMNAEIRYSIAGGNAKGLFIIDQTSGNI 733

Query: 200 SIVDLSAL-NTSTIQLVVVATDTGNPPRQASVPAIMHFPEAIVQQA-------------- 244
           ++ +   + +    +LVV A D G P    +V  +  F    V  A              
Sbjct: 734 TLKEKCVVADLGLHRLVVKAKDLGQPDSLFNVIVVNLFVNESVTNATLINELVHKSIETP 793

Query: 245 ------SSKLNSGTSSTVLIILGVVLIVLGFVIILLILYI 278
                 ++  +S TS  V I+   V IV G + ++L+++I
Sbjct: 794 VTQNVETADASSPTSDYVKIM---VAIVAGTITVILVIFI 830



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 36/117 (30%), Positives = 61/117 (52%), Gaps = 10/117 (8%)

Query: 73  RDLRVKYWLSNDYGERFSIS-RQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATV 128
           R+  + Y L  D    F++  R G ++ ++ LD E ++ Y FTV A D     + T+ATV
Sbjct: 497 RNAEINYLLGTDAPPEFNLDHRTGILTAVKKLDREKQEKYYFTVLAKDNGIPPLITNATV 556

Query: 129 NISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDR--VTLSL 183
            ++V++ ND  P F + +Y  ++P     +L     +G +   D D G+   VTLS+
Sbjct: 557 LVTVLDQNDNSPIFTHNEYNFYVPE----NLPRHGTVGLITVTDPDYGENSAVTLSI 609


>gi|262263227|tpg|DAA06604.1| TPA_inf: protocadherin gamma b3 isoform [Anolis carolinensis]
          Length = 939

 Score = 61.2 bits (147), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 67/274 (24%), Positives = 123/274 (44%), Gaps = 37/274 (13%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKP---RDLRVKYWLSNDYGERFSIS-------RQ 94
           F K+ Y    LEN P    +  V  + P   R+ ++ Y   +   E   +S         
Sbjct: 453 FEKSSYIAYILENNPAGVFIFHVKASDPDLNRNAQITYSFLSTSIEDLPLSSYISINSET 512

Query: 95  GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYP----QY 147
           G I   +  DYE    ++  V A D     + +SATV + +++ ND  P+  YP    + 
Sbjct: 513 GTIYSQRSFDYEQLREFQIEVRAQDGGSPPLNSSATVTVCILDRNDNSPQILYPSQAPEG 572

Query: 148 ELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSI-NDSGHI---- 199
                 +P +    G ++ KV A D D G    LS   L+     +F+I + +G I    
Sbjct: 573 SSVFEMVPRS-AESGYLVTKVVAVDADSGHNSWLSFHLLQATEPSLFTIGSHTGEIQTAR 631

Query: 200 SIVDLSALNTSTIQLVVVATDTGNPPRQASVPAIMHFPEAIVQQASSKLNSGTSST---- 255
           ++++  AL     +LVV+  D G+PP  A+V   + F E+  Q+A  ++NS  + +    
Sbjct: 632 TLLERDALKQ---RLVVMVKDNGHPPLSATVTVNLVFAESF-QEALPEINSQPNDSESPS 687

Query: 256 ---VLIILGVVLIVLGFVIILLILYIHKNKHTKN 286
                ++L + L+   F++ +++  + K + ++N
Sbjct: 688 DIQFYLVLALALVSFLFLVTVILTIMMKLRRSRN 721



 Score = 51.2 bits (121), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 49/196 (25%), Positives = 93/196 (47%), Gaps = 21/196 (10%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVT---TNKPRDLRVKYWLSN---DYGERFSIS-RQGDI 97
           FS+  Y VS  EN+P+   +L V    +++  +  + Y  S+       +F +  + G I
Sbjct: 243 FSQAMYKVSLKENVPIGMSVLQVKASDSDEGLNAEITYTFSDIQETAEHKFQLDPKNGTI 302

Query: 98  SLMQCLDYETEDSYRFTVYATD-TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
           +L++ +D+E + +Y   + A+D + +     V I V++ ND  P          +P    
Sbjct: 303 TLLESIDFENQKNYVMIIQASDGSGLVAHCNVEIDVLDENDNAPDVIVTSISSPIPE--- 359

Query: 157 ADLTPGSVIGKVEAADGDKGD--RVTLSLRG--PYEKMFSINDSGHISIVDLSALNTSTI 212
            DL PG+VI  ++  D D G+   V+  L+   P++ + S +D  +  ++    L+  + 
Sbjct: 360 -DLEPGAVIALIKVHDRDSGENGEVSCHLQEFVPFQIVSSSDD--YFKLLTDGQLDRESA 416

Query: 213 ---QLVVVATDTGNPP 225
               + + ATD G PP
Sbjct: 417 PEYNITITATDKGTPP 432


>gi|345791457|ref|XP_003433493.1| PREDICTED: protocadherin-15 isoform 1 [Canis lupus familiaris]
          Length = 1683

 Score = 61.2 bits (147), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 64/241 (26%), Positives = 111/241 (46%), Gaps = 27/241 (11%)

Query: 6   DFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVL- 64
           DF Q   LV++A Q +     A A+L +     + +   F+   Y    LE+ PV   + 
Sbjct: 361 DFHQKFDLVIKAEQDNGHPLPAFASLHIEILDENNQSPYFTMPSYQGYILESAPVGATIS 420

Query: 65  --LTVTT-----------NKPRDLRVKYWLSNDYGERFSISRQG---DISLMQCLDYETE 108
             L +TT              +D  +  +L NDY   F++++ G    ++L+Q +D E +
Sbjct: 421 DSLNLTTPLRIVALDKDIEDTKDPELHLFL-NDYTSVFTVTQTGITRYLTLLQPVDREEQ 479

Query: 109 DSYRFTVYATDTLMTTSAT-VNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGK 167
            +Y F++ A D +  +    VNI V++ ND  P F    Y++++      D++PG  + +
Sbjct: 480 QTYTFSITAFDGVQESEPVIVNIRVMDANDNTPTFPEISYDVYV----YTDMSPGDSVIQ 535

Query: 168 VEAADGDKG--DRVTLSLRGPYEKMFSIND-SGHISIVDLSALNTS-TIQLVVVATDTGN 223
           + A D D+G    +T  +    +  F+IN  SG +++    AL    T  L V A D   
Sbjct: 536 LTAVDADEGPNGEITYDILVGAQGDFAINRTSGLVTVAPGRALTVGRTYALTVQAADNAP 595

Query: 224 P 224
           P
Sbjct: 596 P 596



 Score = 51.2 bits (121), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 71/233 (30%), Positives = 103/233 (44%), Gaps = 26/233 (11%)

Query: 13   LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKP 72
            LVV A       R++  TL +           F+ + Y+V   ENLP     L +   K 
Sbjct: 792  LVVVATDGAVHPRHSTLTLAIKVLDIDDNSPVFTNSTYTVVVEENLPAGTTFLQIEA-KD 850

Query: 73   RDL--RVKYWLSNDYGERFSISR--QGDISLMQCLDYET----EDSYRFTVYATD---TL 121
             DL   V Y + +   + F       G++SL++ LDYE+    E S  F V A D   T+
Sbjct: 851  VDLGANVSYRIRSPEVKHFFALHPFTGELSLLRSLDYESFPEQEASITFLVEAFDIYGTM 910

Query: 122  MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDK----GD 177
                ATV + V ++ND+ P F    Y+  +      D   G+ I  V A D D       
Sbjct: 911  PPGIATVTVIVKDMNDYPPVFSKRIYKGMV----APDAVKGTPITTVYAEDADPPGLPAS 966

Query: 178  RVTL---SLRGPY-EKMFSIN-DSGH-ISIVDLSALNTSTIQLVVVATDTGNP 224
            RV      ++ PY   +F +  DSG  I+ V+L+   T+  +LVVVA D G P
Sbjct: 967  RVRYRVDDVQFPYPASIFDVEEDSGRVITRVNLNEEPTTIFKLVVVAFDDGEP 1019



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 54/193 (27%), Positives = 95/193 (49%), Gaps = 10/193 (5%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGER-FSISRQ-GDISLMQ 101
           +F +  YS+   E + +  VLL +         + Y + N   +R F++S   G ++L +
Sbjct: 620 RFPQLMYSLEISEAMRIGAVLLNLQATDREGDPITYAIENGDPQRVFNLSETTGILTLGK 679

Query: 102 CLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLP-HIPLADLT 160
            LD E+ D Y   V A+D     ++T  ++VV  +        P ++ +LP ++ + +  
Sbjct: 680 ALDRESTDRYILIVTASDGRPDGTSTATVNVVVTDV---NDNAPMFDPYLPRNLSVVEEE 736

Query: 161 PGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDSGHI-SIVDLSALNTSTIQLVVV 217
             + +G+V A D D G   +V  SL G +  +F I  +G I + V L+     + QLVVV
Sbjct: 737 ANAFVGQVRATDPDAGINGQVHYSL-GNFNNLFRITSNGSIYTAVKLNREVRDSYQLVVV 795

Query: 218 ATDTGNPPRQASV 230
           ATD    PR +++
Sbjct: 796 ATDGAVHPRHSTL 808



 Score = 46.2 bits (108), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 57/119 (47%), Gaps = 8/119 (6%)

Query: 76  RVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDTLM---TTSATVNISV 132
           +V Y L N +   F I+  G I     L+ E  DSY+  V ATD  +    ++ T+ I V
Sbjct: 756 QVHYSLGN-FNNLFRITSNGSIYTAVKLNREVRDSYQLVVVATDGAVHPRHSTLTLAIKV 814

Query: 133 VNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMF 191
           ++++D  P F    Y + +      +L  G+   ++EA D D G  V+  +R P  K F
Sbjct: 815 LDIDDNSPVFTNSTYTVVVEE----NLPAGTTFLQIEAKDVDLGANVSYRIRSPEVKHF 869


>gi|410974957|ref|XP_003993905.1| PREDICTED: protocadherin-15 isoform 9 [Felis catus]
          Length = 1538

 Score = 61.2 bits (147), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 60/195 (30%), Positives = 99/195 (50%), Gaps = 14/195 (7%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGER-FSISRQ-GDISLMQ 101
           +F +  YS+   E + +  VLL +         + Y + N   +R F++S   G ++L +
Sbjct: 615 RFPQLMYSLEISEAMRIGAVLLNLQATDREGDPITYAIENGDPQRVFNLSETTGILTLGK 674

Query: 102 CLDYETEDSYRFTVYATDTL--MTTSATVNISVVNVNDWDPRFRYPQYELFLP-HIPLAD 158
            LD E+ D Y   V A+D     T++ATVN+ V +VND  P F     + +LP ++ + +
Sbjct: 675 ALDRESTDRYILIVTASDGRPDGTSTATVNVLVTDVNDNAPVF-----DPYLPRNLSVVE 729

Query: 159 LTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDSGHI-SIVDLSALNTSTIQLV 215
               + +G+V A D D G   +V  SL G +  +F I  +G I + V L+       +LV
Sbjct: 730 EEANAFVGQVRATDPDAGINGQVHYSL-GNFNNLFRITSNGSIYTAVKLNREVRDYYELV 788

Query: 216 VVATDTGNPPRQASV 230
           VVATD    PR +++
Sbjct: 789 VVATDGAVHPRHSTL 803



 Score = 60.8 bits (146), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 65/241 (26%), Positives = 111/241 (46%), Gaps = 27/241 (11%)

Query: 6   DFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVL- 64
           DF Q   LV++A Q +     A A+L +     + +   F+   Y    LE+ PV   + 
Sbjct: 356 DFHQKFDLVIKAEQDNGHPLPAFASLHIEILDENNQSPYFTMPSYQGYILESAPVGATIS 415

Query: 65  --LTVTT-----------NKPRDLRVKYWLSNDYGERFSISRQG---DISLMQCLDYETE 108
             L +TT              +D  +  +L NDY   F++++ G    ++L+Q +D E +
Sbjct: 416 DSLNLTTPLRIVALDKDIEDTKDPELHLFL-NDYTSVFTVTQTGITRYLTLLQPVDREEQ 474

Query: 109 DSYRFTVYATDTLMTTS-ATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGK 167
            +Y F++ A D +  +    VNI V++ ND  P F    Y++++      D++PG  + +
Sbjct: 475 QTYTFSITAFDGVQESEPVIVNIRVMDANDNTPTFPEISYDVYV----YTDMSPGDSVIQ 530

Query: 168 VEAADGDKGD--RVTLSLRGPYEKMFSIND-SGHISIVDLSALNTS-TIQLVVVATDTGN 223
           + A D D+G    +T  +    +  F+IN  +G I+I    AL    T  L V A D   
Sbjct: 531 LTAVDADEGSNGEITYEILVGAQGDFTINRTTGLITIAQGVALTVGRTYALTVQAADNAP 590

Query: 224 P 224
           P
Sbjct: 591 P 591



 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 71/233 (30%), Positives = 103/233 (44%), Gaps = 26/233 (11%)

Query: 13   LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKP 72
            LVV A       R++  TL +           F+ + Y+V   ENLP     L +   K 
Sbjct: 787  LVVVATDGAVHPRHSTLTLAIKVLDIDDNSPVFTNSTYTVIVEENLPAGTTFLQIEA-KD 845

Query: 73   RDL--RVKYWLSNDYGERFSISR--QGDISLMQCLDYET----EDSYRFTVYATD---TL 121
             DL   V Y + +   + F       G++SL++ LDYE+    E S  F V A D   T+
Sbjct: 846  VDLGANVSYRIRSPEVKHFFALHPFTGELSLLRSLDYESFPDQEASITFLVEAFDIYGTM 905

Query: 122  MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDK----GD 177
                ATV + V ++ND+ P F    Y+  +      D   G+ I  V A D D       
Sbjct: 906  PPGIATVTVIVKDMNDYPPVFSKRIYKGMV----APDAVKGTPITTVYAEDADPPGLPAS 961

Query: 178  RVTL---SLRGPY-EKMFSIN-DSGH-ISIVDLSALNTSTIQLVVVATDTGNP 224
            RV      ++ PY   +F +  DSG  I+ V+L+   T+  +LVVVA D G P
Sbjct: 962  RVRYRVDDVQFPYPASIFDVEEDSGRVITRVNLNEEPTTIFKLVVVAFDDGEP 1014



 Score = 44.3 bits (103), Expect = 0.092,   Method: Compositional matrix adjust.
 Identities = 35/119 (29%), Positives = 55/119 (46%), Gaps = 8/119 (6%)

Query: 76  RVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDTLMT---TSATVNISV 132
           +V Y L N +   F I+  G I     L+ E  D Y   V ATD  +    ++ T+ I V
Sbjct: 751 QVHYSLGN-FNNLFRITSNGSIYTAVKLNREVRDYYELVVVATDGAVHPRHSTLTLAIKV 809

Query: 133 VNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMF 191
           ++++D  P F    Y + +      +L  G+   ++EA D D G  V+  +R P  K F
Sbjct: 810 LDIDDNSPVFTNSTYTVIVEE----NLPAGTTFLQIEAKDVDLGANVSYRIRSPEVKHF 864


>gi|270014310|gb|EFA10758.1| starry night [Tribolium castaneum]
          Length = 3257

 Score = 61.2 bits (147), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 61/212 (28%), Positives = 99/212 (46%), Gaps = 25/212 (11%)

Query: 44  QFSKNEYSVSALENL-----PVNYVLLTVTTNKPRDLRVKYWL-SNDYGERFSI-SRQGD 96
           QFS+  Y+V+  E++     PV   +     ++  +  ++Y + S +   +F+I S  GD
Sbjct: 518 QFSERTYTVALDEDIDWTSNPVIAHIKATDADQGNNAAIRYAIISGNTQSQFAIDSLTGD 577

Query: 97  ISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
           +SL++ LDYET  SYR  + A D      + +  + I+V +VND  PRF    Y      
Sbjct: 578 VSLVKPLDYETLRSYRLVIRAQDGGSPARSNTTQLLINVKDVNDNAPRF----YTSLFQE 633

Query: 154 IPLADLTPGSVIGKVEAADGDKGD----RVTLSLR---GPYEKMFSINDSGHISIV---- 202
               +   G  I KV+A D D+G     + T++ R   G   + F +    H   +    
Sbjct: 634 SIQENAPAGYSIVKVQAYDADEGPNADIKYTIAPRDSIGASTEDFPLTVDSHTGWITTTK 693

Query: 203 DLSALNTSTIQLVVVATDTGNPPRQASVPAIM 234
           +L   + S     V+ATD G PP+ AS   I+
Sbjct: 694 ELDREDQSKFMFQVIATDQGTPPQSASASVII 725



 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 66/211 (31%), Positives = 100/211 (47%), Gaps = 16/211 (7%)

Query: 27  ALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVT-TNKPRDLRVKYWLSN-D 84
           A A++I++    +  +  F    Y     E+ P    + TVT T+   D R+ Y L+N +
Sbjct: 719 ASASVIITVQDVNDNDPVFEPKIYESVVSEDDPPGTPVATVTATDADEDTRLHYELTNGN 778

Query: 85  YGERFSISRQ---GDISLMQCLDYETEDSYRFTVYATDT-LMTTSATVNISVVNVNDWDP 140
              RF+I+ Q   G I++ Q LDY+ E  Y  TV A+D+   T +ATV +++ + N++ P
Sbjct: 779 TRGRFAITSQNGRGVITVAQPLDYKQEKRYILTVTASDSGGRTDTATVYVNITDANNFAP 838

Query: 141 RFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSL--RGPYEKMFSIN-- 194
            F    Y   +      D   G+ +  V A D D G   ++T SL   G +   F+IN  
Sbjct: 839 VFENAPYTASV----FEDAAVGTTVLVVSATDNDVGLNAQITYSLGEDGDHPAEFTINPQ 894

Query: 195 DSGHISIVDLSALNTSTIQLVVVATDTGNPP 225
               I+   L    TS   L V A D GNPP
Sbjct: 895 TGAIITTRTLDRETTSGYLLTVTARDGGNPP 925



 Score = 47.0 bits (110), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 62/245 (25%), Positives = 105/245 (42%), Gaps = 19/245 (7%)

Query: 6    DFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLL 65
            D+ Q    ++     D+  R   AT+ V+    +     F    Y+ S  E+  V   +L
Sbjct: 801  DYKQEKRYILTVTASDSGGRTDTATVYVNITDANNFAPVFENAPYTASVFEDAAVGTTVL 860

Query: 66   TVTTNKPR---DLRVKYWLS--NDYGERFSISRQ-GDISLMQCLDYETEDSYRFTVYATD 119
             V+        + ++ Y L    D+   F+I+ Q G I   + LD ET   Y  TV A D
Sbjct: 861  VVSATDNDVGLNAQITYSLGEDGDHPAEFTINPQTGAIITTRTLDRETTSGYLLTVTARD 920

Query: 120  T---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG 176
                 ++ +  V IS+ +VND  P F+   Y   +    L D   G+ + +V A D D G
Sbjct: 921  GGNPPLSDTTDVEISLTDVNDNYPVFKQAAYSGSV----LEDALVGTSVVQVSATDADVG 976

Query: 177  --DRVTLSL--RGPYEKMFSINDSGHISIVD--LSALNTSTIQLVVVATDTGNPPRQASV 230
               +++ SL  +   +  F I+ +  +   +  L   + +  +L   A D G+P   +SV
Sbjct: 977  LNGKISYSLSEKDKEDGSFVIDPTSGVIRTNKGLDRESVAVYELEAYAIDRGSPTLSSSV 1036

Query: 231  PAIMH 235
            P  +H
Sbjct: 1037 PVTIH 1041


>gi|149055476|gb|EDM07060.1| protocadherin 11 X-linked (predicted) [Rattus norvegicus]
          Length = 1018

 Score = 61.2 bits (147), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 79/277 (28%), Positives = 117/277 (42%), Gaps = 59/277 (21%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGE-------------RFSI 91
           F+ NEY+    ENLP +  +  +T   P           DYGE             +F+I
Sbjct: 570 FTHNEYNFYVPENLPKHGTVGLITVTDP-----------DYGENSAVTLSVLDVNDQFTI 618

Query: 92  SRQ-GDISLMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYP-- 145
             Q G I      D E ++SY F V A D      +++A V I+VV+VND  P F  P  
Sbjct: 619 DPQSGVIRPNISFDREKQESYTFYVKAEDGGRVSRSSTAKVTINVVDVNDNKPIFIDPPS 678

Query: 146 --QYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIND-SGHI 199
              +E  LP        PG+VI KV A D D G    L    + G  + +F I   SG+I
Sbjct: 679 NYSFEWVLPST-----DPGTVIFKVLAIDNDTGMNAELRYSIVGGNTKGLFMIEQISGNI 733

Query: 200 SIVDLSALNTSTIQLVVV-ATDTGNP-----------PRQASVPAIMHFPEAIVQQASSK 247
           ++ +   ++   +  V+V A D G P               SVP      E + +   S 
Sbjct: 734 TLKEKCMVSDIGLHRVIVKAKDLGQPDSLFNVVNVNLFVNESVPNTTLIYEMVRKSIDSP 793

Query: 248 LN------SGTSSTVLIILGVVLIVLGFVIILLILYI 278
            N      S +S T   +  +V IV G + ++L+++I
Sbjct: 794 ANQNSETTSASSPTTDYVKIMVAIVAGTITVVLVIFI 830



 Score = 51.6 bits (122), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 62/117 (52%), Gaps = 10/117 (8%)

Query: 73  RDLRVKYWLSNDYGERFSISRQ-GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATV 128
           R+  + Y L  D    F++ R+ G ++ ++ LD E ++ Y FTV A D     + ++ATV
Sbjct: 497 RNAEINYLLGFDAPPEFNLDRRTGILTAVKKLDREKQEKYYFTVLAQDNGIPPLMSNATV 556

Query: 129 NISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDR--VTLSL 183
            ++V++ ND  P F + +Y  ++P     +L     +G +   D D G+   VTLS+
Sbjct: 557 FVTVLDQNDNSPIFTHNEYNFYVPE----NLPKHGTVGLITVTDPDYGENSAVTLSV 609



 Score = 39.7 bits (91), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 37/140 (26%), Positives = 70/140 (50%), Gaps = 17/140 (12%)

Query: 103 LDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLP-HIPLAD 158
           LD E +D+Y   V   D      +++A + +SV + ND  P F   + E+ +P + P+  
Sbjct: 207 LDREEKDTYVMKVKVEDGGFPQRSSTAILQVSVADTNDNRPIFIEKEIEVSIPENAPI-- 264

Query: 159 LTPGSVIGKVEAADGDKGDRVTLSL------RGPYEKMFSIN-DSGHISIVD-LSALNTS 210
              GS + ++ A D D G+   +            +++F +N  +G I++ + L    + 
Sbjct: 265 ---GSSVTQLHATDADIGENARIHFYFSNLVSNNAKRLFHLNTTTGLITVKEPLDREESP 321

Query: 211 TIQLVVVATDTGNPPRQASV 230
           + +L+V+ATD G+ P +A V
Sbjct: 322 SHKLLVLATDGGSTPAKAMV 341


>gi|395736281|ref|XP_003776726.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin beta-10 [Pongo
           abelii]
          Length = 798

 Score = 61.2 bits (147), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 73/151 (48%), Gaps = 12/151 (7%)

Query: 95  GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFL 151
           G +  ++ LDYE   ++ F V ATD     +++ A V + V++ ND  P   YP      
Sbjct: 511 GHLFALRSLDYEALQAFEFRVGATDRGSPALSSEALVRVLVLDANDNSPFVLYPLQNGSA 570

Query: 152 PHIPLA--DLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSI-NDSGHISIVDL- 204
           P   L      PG ++ KV A DGD G    LS   L+     +FS+   +G +    L 
Sbjct: 571 PCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKATEPGLFSVWAHNGEVRTARLL 630

Query: 205 SALNTSTIQLVVVATDTGNPPRQASVPAIMH 235
           S  +T+  +LVV+  D G PPR A+  A +H
Sbjct: 631 SERDTAKHRLVVLVKDNGEPPRSAT--ATLH 659



 Score = 38.1 bits (87), Expect = 6.9,   Method: Compositional matrix adjust.
 Identities = 42/129 (32%), Positives = 58/129 (44%), Gaps = 21/129 (16%)

Query: 111 YRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGK 167
           Y  T+  TD     + T   + + V +VND  P F    Y LF+      + +P   IG 
Sbjct: 417 YYITICLTDLGTPRLKTEHNITLLVSDVNDNAPAFTQTSYTLFVRE----NNSPALHIGS 472

Query: 168 VEAADGDKGD--RVTLSLRGPYE------KMFSIN-DSGH---ISIVDLSALNTSTIQLV 215
           V A D D G   +VT SL  P +       + SIN D+GH   +  +D  AL     +  
Sbjct: 473 VSATDRDSGTNAQVTYSLLPPQDLHLPLASLVSINADNGHLFALRSLDYEALQ--AFEFR 530

Query: 216 VVATDTGNP 224
           V ATD G+P
Sbjct: 531 VGATDRGSP 539


>gi|395820393|ref|XP_003783552.1| PREDICTED: cadherin-related family member 1 [Otolemur garnettii]
          Length = 858

 Score = 61.2 bits (147), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 56/174 (32%), Positives = 82/174 (47%), Gaps = 23/174 (13%)

Query: 77  VKYWLSNDYGERFSISRQGDISLMQC---LDYETEDSYRFTVYA---------TDTLMTT 124
           V Y+L N +  +F++ R   +  +Q    LDYE   ++  TV A          D + + 
Sbjct: 170 VTYFLQNLHSTKFAMDRHSGVLRLQAGATLDYEMSRTHYVTVVAKDGGGRLRGADVVFSA 229

Query: 125 SATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLS 182
           +AT+ ++V +V D  P F    Y  ++      D  PGS I KV A DGD+G  + V  S
Sbjct: 230 TATITVNVEDVQDTAPVFVGTPYYGYV----YEDTLPGSEILKVVAMDGDRGKPNHVLYS 285

Query: 183 LRGPYEKMFSIND-SGHISIVDLSA-LNTSTIQLVVVATD---TGNPPRQASVP 231
           L    E  F IN+ SG IS++   A L     +L +  T+    G P  QA VP
Sbjct: 286 LVNGSEGAFEINETSGAISVLQSPAQLQREVYELHIQVTEISSVGTPAAQAMVP 339



 Score = 42.7 bits (99), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 59/186 (31%), Positives = 82/186 (44%), Gaps = 17/186 (9%)

Query: 56  ENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGER--FSISRQ-GDISLMQCLDYETEDSYR 112
           E+ PV   + T+    P    V Y +S D   R  FS+    G+I+L++ LD E ED   
Sbjct: 46  EDTPVGSHVYTLNGTDPEGDPVTYHISFDPSMRSVFSVDPNFGNITLVEELDREREDEIE 105

Query: 113 FTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAAD 172
             +  +D L   +  V I V + ND  PRF    Y + +P     D   GS I KV A D
Sbjct: 106 AIISISDGLNLVAEKVVILVTDANDEAPRFIEEPYVVLVPE----DTPAGSSIFKVHAVD 161

Query: 173 GD--KGDRVTLSLRGPYEKMFSINDSGHISIVDLSALNT------STIQLVVVATDTGNP 224
            D   G  VT  L+  +   F+++   H  ++ L A  T       T  + VVA D G  
Sbjct: 162 KDTGSGGSVTYFLQNLHSTKFAMDR--HSGVLRLQAGATLDYEMSRTHYVTVVAKDGGGR 219

Query: 225 PRQASV 230
            R A V
Sbjct: 220 LRGADV 225


>gi|268569702|ref|XP_002648317.1| C. briggsae CBR-CDH-5 protein [Caenorhabditis briggsae]
          Length = 1529

 Score = 61.2 bits (147), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 55/178 (30%), Positives = 82/178 (46%), Gaps = 11/178 (6%)

Query: 56  ENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTV 115
           EN P N V++++     +DL     +  +   +F+I   G I     LD E    Y   V
Sbjct: 325 ENTPANTVVVSLGDESSKDLTYFNIVGGNEEGKFAIDDAGTIVTADELDREKTAMYSLQV 384

Query: 116 YATDT-----LMTTSATVNISVVNVNDWDPRFRYPQ-YELFLPHIPLADLTPGSVIGK-- 167
                     L  T   V ++V++VND  P F  PQ   L L    +  LT   +IGK  
Sbjct: 385 ETRSRNPDQHLYWT--LVQVTVMDVNDNAPIFTDPQPIRLRLSIDDIEQLTANMIIGKIG 442

Query: 168 VEAADGDKGDRVTLSLRGPYEKMFSINDSGHISI-VDLSALNTSTIQLVVVATDTGNP 224
           VE AD D   R+ L +  P+ K+F+I++ G +S+  D +A +     L +VA D G P
Sbjct: 443 VEDADADDNGRLELRIMPPHNKLFAISNEGILSVNGDFTAAHFGEHDLTIVARDHGEP 500



 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 40/145 (27%), Positives = 66/145 (45%), Gaps = 18/145 (12%)

Query: 95  GDISLMQCLDYETEDSYRFTVYAT-------DTLMTTSATVNISVVNVNDWDPRFRYPQY 147
           G ++L++ LD E   +    V  +       D  +    ++ I+V + NDW P F    Y
Sbjct: 799 GSVNLLRPLDAEMNSTVTIQVSTSEAQTLEVDPKLAHFVSITINVADKNDWIPNFESASY 858

Query: 148 ELFLPHIPLADLTPGSVIGKVEAADGDKGD-----RVTLSLRGPYEKMFSIN-DSGHISI 201
           +  +      D  PG+++G+V A D D+ D     R  L   G  E  F++N +SG I++
Sbjct: 859 DFDVKE----DTLPGTIVGQVNAFDQDRDDPNNRIRYRLLSAGGLEAHFNVNAESGLITL 914

Query: 202 VD-LSALNTSTIQLVVVATDTGNPP 225
              + A     I L +   D+G PP
Sbjct: 915 ARPIDAFAGEKITLRIEGADSGMPP 939


>gi|33317688|gb|AAQ04772.1| putative protocadherinX [Pan troglodytes]
 gi|37813461|gb|AAR04488.1| protocadherin X precursor short isoform [Pan paniscus]
          Length = 1025

 Score = 61.2 bits (147), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 76/274 (27%), Positives = 120/274 (43%), Gaps = 40/274 (14%)

Query: 45  FSKNEYSVSALENLPVNYV--LLTVTTNKPRDLRVKYWLSNDYGERFSISRQ-GDISLMQ 101
           F+ NEY+    ENLP +    L+TVT     D         D  + F+I  Q G I    
Sbjct: 570 FTHNEYNFYVPENLPRHGTVGLITVTDPDYGDNSAVTLSILDENDDFTIDSQTGVIRPNI 629

Query: 102 CLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYP----QYELFLPHI 154
             D E ++SY F V A D      ++SA V I+VV+VND  P F  P     YEL LP  
Sbjct: 630 SFDREKQESYTFYVKAEDGGRVSRSSSAKVTINVVDVNDNKPVFIVPPSNYSYELVLPST 689

Query: 155 PLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-DSGHISIVDLSALNTS 210
                 PG+V+ +V A D D G    +    + G    +F+I+ ++G+I++++   +   
Sbjct: 690 -----NPGTVVFQVMAVDNDTGMNAEVRYSIVGGNTRDLFAIDQETGNITLMEKCDVTDL 744

Query: 211 TIQLVVV-ATDTGNPPRQASVPAIMHFPEAIVQQAS--------------------SKLN 249
            +  V+V A D G P    SV  +  F    V  A+                    + ++
Sbjct: 745 GLHRVLVKANDLGQPDSLFSVVIVNLFVNESVTNATLINELVRKSTEAPVTPNTEIADVS 804

Query: 250 SGTSSTVLIILGVVLIVLGFVIILLILYIHKNKH 283
           S TS  V I++  V   +  V+++ I  + + + 
Sbjct: 805 SPTSDYVKILVAAVAGTITVVVVIFITAVVRCRQ 838



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/114 (32%), Positives = 61/114 (53%), Gaps = 10/114 (8%)

Query: 76  RVKYWLSNDYGERFSISRQ-GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNIS 131
            + Y L  D    FS+ R+ G +++++ LD E ED Y FT+ A D     +T++ TV +S
Sbjct: 500 EINYLLGPDAPPEFSLDRRTGMLTVVKKLDREKEDKYLFTILAKDNGVPPLTSNVTVFVS 559

Query: 132 VVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDR--VTLSL 183
           +++ ND  P F + +Y  ++P     +L     +G +   D D GD   VTLS+
Sbjct: 560 IIDQNDNSPVFTHNEYNFYVPE----NLPRHGTVGLITVTDPDYGDNSAVTLSI 609



 Score = 38.1 bits (87), Expect = 7.9,   Method: Compositional matrix adjust.
 Identities = 36/139 (25%), Positives = 67/139 (48%), Gaps = 15/139 (10%)

Query: 103 LDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADL 159
           LD E +D+Y   V   D      +++A + +SV + ND  P F+  + E+ +P     + 
Sbjct: 207 LDREEKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVFKETEIEVSIPE----NA 262

Query: 160 TPGSVIGKVEAADGDKGDRVTLS------LRGPYEKMFSIN-DSGHISIVD-LSALNTST 211
             G+ + ++ A D D G+   +       +     ++F +N  +G I+I + L    T  
Sbjct: 263 PVGTSVTQLHATDADIGENAKIHFSFSNLVSNIARRLFHLNATTGLITIKEPLDREETPN 322

Query: 212 IQLVVVATDTGNPPRQASV 230
            +L+V+A+D G  P +A V
Sbjct: 323 HKLLVLASDGGLMPARAMV 341


>gi|410974959|ref|XP_003993906.1| PREDICTED: protocadherin-15 isoform 10 [Felis catus]
          Length = 1528

 Score = 61.2 bits (147), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 60/195 (30%), Positives = 99/195 (50%), Gaps = 14/195 (7%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGER-FSISRQ-GDISLMQ 101
           +F +  YS+   E + +  VLL +         + Y + N   +R F++S   G ++L +
Sbjct: 615 RFPQLMYSLEISEAMRIGAVLLNLQATDREGDPITYAIENGDPQRVFNLSETTGILTLGK 674

Query: 102 CLDYETEDSYRFTVYATDTL--MTTSATVNISVVNVNDWDPRFRYPQYELFLP-HIPLAD 158
            LD E+ D Y   V A+D     T++ATVN+ V +VND  P F     + +LP ++ + +
Sbjct: 675 ALDRESTDRYILIVTASDGRPDGTSTATVNVLVTDVNDNAPVF-----DPYLPRNLSVVE 729

Query: 159 LTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDSGHI-SIVDLSALNTSTIQLV 215
               + +G+V A D D G   +V  SL G +  +F I  +G I + V L+       +LV
Sbjct: 730 EEANAFVGQVRATDPDAGINGQVHYSL-GNFNNLFRITSNGSIYTAVKLNREVRDYYELV 788

Query: 216 VVATDTGNPPRQASV 230
           VVATD    PR +++
Sbjct: 789 VVATDGAVHPRHSTL 803



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 65/241 (26%), Positives = 111/241 (46%), Gaps = 27/241 (11%)

Query: 6   DFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVL- 64
           DF Q   LV++A Q +     A A+L +     + +   F+   Y    LE+ PV   + 
Sbjct: 356 DFHQKFDLVIKAEQDNGHPLPAFASLHIEILDENNQSPYFTMPSYQGYILESAPVGATIS 415

Query: 65  --LTVTT-----------NKPRDLRVKYWLSNDYGERFSISRQG---DISLMQCLDYETE 108
             L +TT              +D  +  +L NDY   F++++ G    ++L+Q +D E +
Sbjct: 416 DSLNLTTPLRIVALDKDIEDTKDPELHLFL-NDYTSVFTVTQTGITRYLTLLQPVDREEQ 474

Query: 109 DSYRFTVYATDTLMTTS-ATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGK 167
            +Y F++ A D +  +    VNI V++ ND  P F    Y++++      D++PG  + +
Sbjct: 475 QTYTFSITAFDGVQESEPVIVNIRVMDANDNTPTFPEISYDVYV----YTDMSPGDSVIQ 530

Query: 168 VEAADGDKGD--RVTLSLRGPYEKMFSIND-SGHISIVDLSALNTS-TIQLVVVATDTGN 223
           + A D D+G    +T  +    +  F+IN  +G I+I    AL    T  L V A D   
Sbjct: 531 LTAVDADEGSNGEITYEILVGAQGDFTINRTTGLITIAQGVALTVGRTYALTVQAADNAP 590

Query: 224 P 224
           P
Sbjct: 591 P 591



 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 71/233 (30%), Positives = 103/233 (44%), Gaps = 26/233 (11%)

Query: 13   LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKP 72
            LVV A       R++  TL +           F+ + Y+V   ENLP     L +   K 
Sbjct: 787  LVVVATDGAVHPRHSTLTLAIKVLDIDDNSPVFTNSTYTVIVEENLPAGTTFLQIEA-KD 845

Query: 73   RDL--RVKYWLSNDYGERFSISR--QGDISLMQCLDYET----EDSYRFTVYATD---TL 121
             DL   V Y + +   + F       G++SL++ LDYE+    E S  F V A D   T+
Sbjct: 846  VDLGANVSYRIRSPEVKHFFALHPFTGELSLLRSLDYESFPDQEASITFLVEAFDIYGTM 905

Query: 122  MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDK----GD 177
                ATV + V ++ND+ P F    Y+  +      D   G+ I  V A D D       
Sbjct: 906  PPGIATVTVIVKDMNDYPPVFSKRIYKGMV----APDAVKGTPITTVYAEDADPPGLPAS 961

Query: 178  RVTL---SLRGPY-EKMFSIN-DSGH-ISIVDLSALNTSTIQLVVVATDTGNP 224
            RV      ++ PY   +F +  DSG  I+ V+L+   T+  +LVVVA D G P
Sbjct: 962  RVRYRVDDVQFPYPASIFDVEEDSGRVITRVNLNEEPTTIFKLVVVAFDDGEP 1014



 Score = 44.3 bits (103), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 35/119 (29%), Positives = 55/119 (46%), Gaps = 8/119 (6%)

Query: 76  RVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDTLMT---TSATVNISV 132
           +V Y L N +   F I+  G I     L+ E  D Y   V ATD  +    ++ T+ I V
Sbjct: 751 QVHYSLGN-FNNLFRITSNGSIYTAVKLNREVRDYYELVVVATDGAVHPRHSTLTLAIKV 809

Query: 133 VNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMF 191
           ++++D  P F    Y + +      +L  G+   ++EA D D G  V+  +R P  K F
Sbjct: 810 LDIDDNSPVFTNSTYTVIVEE----NLPAGTTFLQIEAKDVDLGANVSYRIRSPEVKHF 864


>gi|350581222|ref|XP_003124080.3| PREDICTED: protocadherin gamma-A10-like [Sus scrofa]
          Length = 827

 Score = 61.2 bits (147), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 66/197 (33%), Positives = 96/197 (48%), Gaps = 23/197 (11%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGE-------RFSISRQ-GD 96
           FS +EY V+ LENLPV   LLTVT    RD      ++  + +       +F +++  G+
Sbjct: 242 FSLSEYRVNVLENLPVGAQLLTVTATD-RDEGANGEVTYSFRKLPDTQLLKFQLNKNTGE 300

Query: 97  ISLMQCLDYETEDSYRFTVYATD-TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIP 155
           I L + LDYE    Y   + A D      +A V I+V +VND  P        LF P + 
Sbjct: 301 IKLSENLDYEETSFYEIEIQAEDGGAYLATAKVLITVEDVNDNSPEVTITS--LFSPLVE 358

Query: 156 LADLTPGSVIGKVEAADGDKGD--RVTLSLRG--PYEKMFSINDSGHISIVDLSALN--- 208
            + L  GSVI  +   D D G   +VT S+ G  P++   SI+   +  +V   AL+   
Sbjct: 359 DSPL--GSVIALLNVHDLDSGQNGQVTCSISGDLPFKLEKSID--SYYRLVTHKALDREQ 414

Query: 209 TSTIQLVVVATDTGNPP 225
            S+  + V ATD G+PP
Sbjct: 415 VSSYNITVTATDGGSPP 431



 Score = 48.1 bits (113), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 77/274 (28%), Positives = 118/274 (43%), Gaps = 45/274 (16%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKP---RDLRVKYWLSND--YGERFS--ISRQGDI 97
           FS   Y     EN P    + +VT   P    + RV Y L  D   G   S  IS   D 
Sbjct: 452 FSHISYFTYIPENNPRGASIFSVTALDPDSEENARVIYSLVEDTIQGAPLSSYISINSDT 511

Query: 98  SLMQCL---DYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFL 151
            ++  L   DYE     +  V ATD+    ++++ +++I V++ ND  P   YP     L
Sbjct: 512 GVLYALRSFDYEQFRDLQLQVTATDSGNPPLSSNVSLSIFVLDQNDNAPEILYPA----L 567

Query: 152 PH-----IPLA--DLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-DSGHI- 199
           P      + LA     PG ++ KV A D D G    LS   L+     +F++   +G + 
Sbjct: 568 PMDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKASEPGIFAVGLHTGEVR 627

Query: 200 ---SIVDLSALNTSTIQLVVVATDTGNPPRQA----------SVPAIMHFPEAIVQQASS 246
              +++D  AL  S   LVV   D G PP  A          S+P ++   +++   AS 
Sbjct: 628 TARALLDRDALKQS---LVVAVQDHGQPPLSATVTLTVAVADSIPDVLADLDSLESPASP 684

Query: 247 KLNSGTSSTVLIILGVVLIVLGFVIILLILYIHK 280
             +  T   V+ +  V  + L FVI+LL L + +
Sbjct: 685 DDSGLTLYLVVAVAAVSCVFLAFVIVLLALRLRR 718



 Score = 44.3 bits (103), Expect = 0.099,   Method: Compositional matrix adjust.
 Identities = 45/143 (31%), Positives = 65/143 (45%), Gaps = 17/143 (11%)

Query: 101 QCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLA 157
           + LD E   SY  TV ATD     ++T     + V ++ND  P F +  Y  ++P     
Sbjct: 408 KALDREQVSSYNITVTATDGGSPPLSTETHFTLQVADINDNPPTFSHISYFTYIPE---- 463

Query: 158 DLTPGSVIGKVEAADGDKGD--RVTLSL------RGPYEKMFSIN-DSGHI-SIVDLSAL 207
           +   G+ I  V A D D  +  RV  SL        P     SIN D+G + ++      
Sbjct: 464 NNPRGASIFSVTALDPDSEENARVIYSLVEDTIQGAPLSSYISINSDTGVLYALRSFDYE 523

Query: 208 NTSTIQLVVVATDTGNPPRQASV 230
               +QL V ATD+GNPP  ++V
Sbjct: 524 QFRDLQLQVTATDSGNPPLSSNV 546


>gi|167538373|ref|XP_001750851.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163770672|gb|EDQ84355.1| predicted protein [Monosiga brevicollis MX1]
          Length = 10056

 Score = 61.2 bits (147), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 63/189 (33%), Positives = 88/189 (46%), Gaps = 17/189 (8%)

Query: 49   EYSVSALENLPVNYVLLTVTTNKPRDL-RVKYWLSNDYGERFSISRQGDISLMQ-CLDYE 106
            E + +  E   V ++L +V  N P  L  + Y LS      F+I+  G I++ +  LDYE
Sbjct: 3466 ELTFNVSETAEVGHLLGSVLANDPDGLDSLGYALSTPTVP-FAINASGVITVAEERLDYE 3524

Query: 107  -TEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVI 165
             T  S+ FTV  TD+  TT   V + +++ ND  P F     E   P     D   GS+I
Sbjct: 3525 STNKSWSFTVLVTDSHSTTRVPVTVHILDANDNSPVF-----ESTRPVTVAEDAPAGSLI 3579

Query: 166  GKVEAADGDKGDRVTL--SLRGPYEKMFSINDSGHISIVDL---SALNTST---IQLVVV 217
              +  +D D G    L  S+ G     F +  S + S VDL    AL+  T     L +V
Sbjct: 3580 SSILVSDADAGRNAALTYSINGSDNLPFRVQASSNASGVDLLTAGALDFETQASYNLTIV 3639

Query: 218  ATDTGNPPR 226
            ATD G PPR
Sbjct: 3640 ATDAGAPPR 3648



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 53/204 (25%), Positives = 92/204 (45%), Gaps = 21/204 (10%)

Query: 45   FSKNEYSVSALEN-----LPVNYVLLTVTTNKPRDLRVKYWLSNDYGER-FSISRQGDIS 98
            F++ EY+   LE       PV YV+ T     P      + L+     + F+++    + 
Sbjct: 7342 FTQQEYAWQILERGGTDWQPVGYVVATDADVSPAFQATTFSLTASPASKLFALNASTGLL 7401

Query: 99   LMQCLDYETEDSYRFTVYATDT-------LMTTSATVNISVVNVNDWDPRFRYPQYELFL 151
            L Q LD E   ++   V A +T       ++++++T+ I V+++ND  P F    Y++ +
Sbjct: 7402 LAQGLDREATANHTLVVTAQNTVPSTDGKILSSTSTIQIEVLDINDRIPSFEASFYDVAV 7461

Query: 152  PHIPLADLTPGSVIGKVEAADGDKGDR--VTLSLRGPYEKMFSIN-DSGHISI-VDLSAL 207
            P     +   G  I ++ A D D G    V+ SL       FSI+  +G + +   L   
Sbjct: 7462 PE----NEAIGETIEQLVAFDPDAGANGTVSYSLLPDNLTAFSIDATTGRLRVNASLDYE 7517

Query: 208  NTSTIQLVVVATDTGNPPRQASVP 231
               + +  V ATD G PP  ++VP
Sbjct: 7518 TQQSFEFTVRATDAGTPPLYSTVP 7541



 Score = 46.6 bits (109), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 49/161 (30%), Positives = 75/161 (46%), Gaps = 12/161 (7%)

Query: 74   DLRVKYWLSNDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVN 129
            + RV Y L   +G+ F++ +  G++ L   LD ET DSY   V A D     + T+  V 
Sbjct: 8463 EARVSYSLVTSFGDTFTVNASSGEVRLSGTLDRETRDSYVLEVEARDAGSPQLATTTRVT 8522

Query: 130  ISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGD----KGDRVTLSLRG 185
            ++V++VND  P          +    L  L    V+      DGD       ++T SL G
Sbjct: 8523 VTVLDVNDLAPAPLRTNLSCSMREDAL--LGTSCVLPTPLFEDGDLAGSPASQLTFSLEG 8580

Query: 186  PYEKMFSI-NDSGHISIVDLSALNTST-IQLVVVATDTGNP 224
                MFS+ N++G +++  L    T   + L +VATD G P
Sbjct: 8581 ESATMFSVDNETGVLTLQRLLDFETEAFLTLTLVATDHGQP 8621



 Score = 45.4 bits (106), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 46/165 (27%), Positives = 75/165 (45%), Gaps = 27/165 (16%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGERFSISRQGDISLMQCL 103
            Q+S  +  + A  N  V +  L+V +        ++ L +D    F++S  G +SL+  L
Sbjct: 1139 QYSATDADIGA--NALVTFANLSVLSGP------EWALESDSTLPFALSANGTLSLVAPL 1190

Query: 104  DYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLA--- 157
            D E+ + +R  V A D     +   A   ++V +VND  PRF      L   ++ ++   
Sbjct: 1191 DAESANLWRLEVVARDGGTPFLEARAEFVVNVADVNDEPPRF------LNGTNVTISVDE 1244

Query: 158  DLTPGSVIGKVEAADGDKGD---RVTLSLRGPYEKMFSINDSGHI 199
               PG V+  V A DGD      R T S+       FS++ SGH+
Sbjct: 1245 GAAPGGVLATVLAVDGDISGLPVRYTSSM----PAFFSVDASGHV 1285



 Score = 44.7 bits (104), Expect = 0.083,   Method: Compositional matrix adjust.
 Identities = 40/147 (27%), Positives = 68/147 (46%), Gaps = 12/147 (8%)

Query: 90   SISRQGDISLMQCLDYETEDSYRFTVYATDTLMTTSAT-VNISVVNVNDWDPRFRYPQYE 148
            S++  G ++     D+E+     F V  TD +   + T V++ V +VND  P F  P Y 
Sbjct: 7717 SVAPNGSLATTASYDFESTPVTTFDVAVTDGVHQINRTAVSLVVEDVNDLAPAFGQPSYI 7776

Query: 149  LFLPHIPLADLTPGSVIGKVEAADGDKGD----RVTLSLRGPYEKMFSINDSGHISIVDL 204
              +      + T  ++   V A+DGD+       +  +L G     F+I+  G +++   
Sbjct: 7777 CSV----FENATANTLCVLVNASDGDEPGTPRAAIDYTLTGTGATDFTIDRLGAVTVAAT 7832

Query: 205  SALNT---STIQLVVVATDTGNPPRQA 228
              LN    +  +L V ATD G+PPR +
Sbjct: 7833 GVLNRDERAVYRLNVTATDRGSPPRSS 7859



 Score = 39.7 bits (91), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 48/158 (30%), Positives = 74/158 (46%), Gaps = 15/158 (9%)

Query: 87   ERFSISRQGDISLMQCLDYETEDSYRFTVYATD-TLMTTSATVNISVVNVNDWDPRFRYP 145
            +RF +S  G + L+  LDYE+   +R +V A D   + T A   ++V N  D  P     
Sbjct: 3407 KRFRLSATGQLQLITTLDYESAVEHRLSVNAIDGGGLITPAVYVLTVRNEPDESP---IA 3463

Query: 146  QYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSGHISI---- 201
              EL       A++  G ++G V A D D  D +  +L  P    F+IN SG I++    
Sbjct: 3464 PVELTFNVSETAEV--GHLLGSVLANDPDGLDSLGYALSTPTVP-FAINASGVITVAEER 3520

Query: 202  VDLSALNTSTIQLVVVATDTGNPPRQASVPAIMHFPEA 239
            +D  + N S     V+ TD+ +  R   VP  +H  +A
Sbjct: 3521 LDYESTNKS-WSFTVLVTDSHSTTR---VPVTVHILDA 3554



 Score = 38.5 bits (88), Expect = 5.7,   Method: Compositional matrix adjust.
 Identities = 32/129 (24%), Positives = 58/129 (44%), Gaps = 13/129 (10%)

Query: 45   FSKNEYSVSALENL----PVNYVLLTVT--TNKPRDLRVKYWLSNDYGERFSISRQGDIS 98
            FS+  Y+ +  EN+    P++ +L+  T   +      ++  L+ D    F++   G + 
Sbjct: 1335 FSQPAYAAAIPENVAPGTPLDNLLIAATDYVDGAALADIQLELTGDGANDFALLPSGQVV 1394

Query: 99   LMQCLDYETEDSYRFTVYATDTL-----MTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
                LD E  D Y   V A D +     +++ A + I++ +VND  P F +      +P 
Sbjct: 1395 TFAMLDREVRDVYHLEVVARDAVDPTLALSSRANLTITLTDVNDNPPAFTHGNLSCTVPE 1454

Query: 154  --IPLADLT 160
               PLA +T
Sbjct: 1455 NSAPLACVT 1463



 Score = 38.1 bits (87), Expect = 6.3,   Method: Compositional matrix adjust.
 Identities = 29/112 (25%), Positives = 49/112 (43%), Gaps = 8/112 (7%)

Query: 95   GDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHI 154
            G I L   LD+E  +        TD +   +AT  I + +VND  P +           +
Sbjct: 3313 GTIYLGDGLDFEAYEQVSIVFAVTDGVHVVNATATIRLTDVNDNAPVWNTTALAASASEL 3372

Query: 155  PLADLTPGSVIGKVEAADGDKGD--RVTLSLRGPYE--KMFSINDSGHISIV 202
                 +PG+++G++ A D D G    V   L GP    K F ++ +G + ++
Sbjct: 3373 ----TSPGTILGQLLATDADSGSFGTVGFELLGPAVELKRFRLSATGQLQLI 3420


>gi|195325654|gb|ACF95735.1| protocadherin-11 [Mustela putorius furo]
          Length = 686

 Score = 61.2 bits (147), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 86/329 (26%), Positives = 135/329 (41%), Gaps = 60/329 (18%)

Query: 11  ITLVVRAIQYDNQDRYALATL--------IVSKAGTSLRELQ-------FSKNEYSVSAL 55
           I   VR +  + Q++Y+   L        +++ A  S+  L        F+ NEY+    
Sbjct: 251 ILTAVRKLDREKQEKYSFTVLAKDNGMPPLITNATVSVTILDQNDNSPIFTHNEYNFYVP 310

Query: 56  ENLPVNYV--LLTVTTNKPRDLRVKYWLSNDYGERFSISRQ-GDISLMQCLDYETEDSYR 112
           ENLP +    L+TVT     +  V      D  + F+I  Q G I      D E ++ Y 
Sbjct: 311 ENLPRHGTVGLITVTDPDYGENSVVTLSILDMNDHFTIDPQTGVIQPNISFDREKQERYT 370

Query: 113 FTVYATD---TLMTTSATVNISVVNVNDWDPRFRYP----QYELFLPHIPLADLTPGSVI 165
           F V A D      ++++ V I+VV+VND  P F  P     YEL LP        PG+V+
Sbjct: 371 FYVKAEDGGKIPHSSTSKVTINVVDVNDNKPVFIVPSSNNSYELVLP-----SANPGTVV 425

Query: 166 GKVEAADGDKGDRVTLS---LRGPYEKMFSIND-SGHISIVDLSAL-NTSTIQLVVVATD 220
             V A D D G    L    + G  + +F I+  +G+I++ +   + +    +L++ A D
Sbjct: 426 FTVLAVDNDTGMNAKLRYSIVGGNTKGLFIIDQTTGNITLKEKCVVTDLGLYRLIIKAKD 485

Query: 221 TGNPPRQASVPAIMHF------------------------PEAIVQQASSKLNSGTSSTV 256
            G P    SV  +  F                        P      ASS  +      V
Sbjct: 486 LGQPESLFSVVIVNLFVNESVTNATWIHELVYTNIETPVAPNIGTTDASSPTSDYVKIMV 545

Query: 257 LIILGVVLIVLGFVIILLILYIHKNKHTK 285
            II G + ++L  + I  I+  H++ H K
Sbjct: 546 AIIAGTITVIL-VIFITAIVRCHQSPHLK 573



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 35/114 (30%), Positives = 59/114 (51%), Gaps = 10/114 (8%)

Query: 76  RVKYWLSNDYGERFSISRQ-GDISLMQCLDYETEDSYRFTVYATDTLM---TTSATVNIS 131
            + Y L  D    FS+    G ++ ++ LD E ++ Y FTV A D  M    T+ATV+++
Sbjct: 230 EINYLLGVDAPSEFSLDHHTGILTAVRKLDREKQEKYSFTVLAKDNGMPPLITNATVSVT 289

Query: 132 VVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDR--VTLSL 183
           +++ ND  P F + +Y  ++P     +L     +G +   D D G+   VTLS+
Sbjct: 290 ILDQNDNSPIFTHNEYNFYVPE----NLPRHGTVGLITVTDPDYGENSVVTLSI 339



 Score = 41.6 bits (96), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 51/184 (27%), Positives = 73/184 (39%), Gaps = 20/184 (10%)

Query: 56  ENLPVN-YVLLTVTTNKPRDLRVKYWLSNDYGE----RFSISRQGDISLMQCLDYETEDS 110
           EN PVN  + L   T+K  D         D+      R   S Q  +     LDYE+   
Sbjct: 102 ENAPVNTKIALITVTDKDADHNGMVTCFTDHEVPLRLRPVFSNQFLLETAAYLDYESTRE 161

Query: 111 YRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGK 167
           Y   + A D     +  S+ + + V + ND  P F  P   L LP     + +PG+ + K
Sbjct: 162 YAIKLLAADAGKPPLNQSSMLLVKVKDENDNAPVFTQPFISLSLPE----NNSPGTKLTK 217

Query: 168 VEAADGDKGDRVT----LSLRGPYEKMFSINDSGHI--SIVDLSALNTSTIQLVVVATDT 221
           + A DGD G        L +  P E  FS++    I  ++  L           V+A D 
Sbjct: 218 ISATDGDSGYNAEINYLLGVDAPSE--FSLDHHTGILTAVRKLDREKQEKYSFTVLAKDN 275

Query: 222 GNPP 225
           G PP
Sbjct: 276 GMPP 279


>gi|149038757|gb|EDL93046.1| rCG22004, isoform CRA_d [Rattus norvegicus]
          Length = 2934

 Score = 61.2 bits (147), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 59/195 (30%), Positives = 91/195 (46%), Gaps = 20/195 (10%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWLSNDYGERFSIS-RQGDISLM 100
            F +  Y  +  E++ V  V+L VT           ++Y L +  G +F+I+   GDI ++
Sbjct: 2017 FDQLSYQEAVFEDVAVGTVILRVTATDADSGNFALIEYSLVDGEG-KFAINPNTGDIYVL 2075

Query: 101  QCLDYETEDSYRFTVYATDT-------LMTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
              LD E +D Y  T  A D            S  V I V++VND  P+F  PQ+   +  
Sbjct: 2076 SSLDREKKDHYILTALAKDNPGDVASNRRENSVQVVIRVLDVNDCRPQFSKPQFSTSV-- 2133

Query: 154  IPLADLTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSIN-DSGHISIVDLSALNTS 210
                +   G+ +  + A D D+G   ++T SL GP  + FS++ DSG ++       +  
Sbjct: 2134 --YENEPAGTSVITMLATDQDEGSNGQLTYSLEGPGMEAFSVDMDSGLVT-TQRPLQSYE 2190

Query: 211  TIQLVVVATDTGNPP 225
               L VVATD G PP
Sbjct: 2191 RFNLTVVATDGGEPP 2205



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 65/210 (30%), Positives = 94/210 (44%), Gaps = 28/210 (13%)

Query: 45  FSKNEYSVSALENLPVNYVLLTV--TTNKPRDL-RVKYWLSNDYGERFSISRQ-GDISLM 100
           FS+  Y+VS  EN+ V   +LTV  T N       V Y+ S+D  +RFS+ +  G I L+
Sbjct: 76  FSQPLYNVSLYENITVGTSVLTVLATDNDVGTFGEVNYFFSDD-PDRFSLDKDTGLIMLI 134

Query: 101 QCLDYETEDSYRFTVYATDTL-MTTSATVNISVVNVNDWDPRFRYPQYELFL----PHIP 155
             LDYE    +  TV A D     T+  V I+V++VND  P F+   Y   L    P + 
Sbjct: 135 ARLDYELIQRFTLTVIARDGGGEETTGRVRINVLDVNDNVPTFQKDAYVGALRENEPSV- 193

Query: 156 LADLTPGSVIGKVEAADGDKGDR-------VTLSLRGPYEKMFSINDSGHISI---VDLS 205
                  + + ++ A D D           V  S  G Y  +      G IS+   +D  
Sbjct: 194 -------TQLVRLRATDEDSPPNNLITYSIVNASAFGSYFDISVYEGYGVISVSRPLDYE 246

Query: 206 ALNTSTIQLVVVATDTGNPPRQASVPAIMH 235
            +    I L V+A D GNPP  ++VP  + 
Sbjct: 247 QIPNGLIYLTVMAKDAGNPPLYSTVPVTIE 276



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 67/218 (30%), Positives = 101/218 (46%), Gaps = 44/218 (20%)

Query: 45  FSKNEYSVSALENLPVNY-VLLTVTTNKPRDLRVKYWLSNDYGE-----------RFSI- 91
           FSK  Y VS +EN+     VL    T+  R        S +YG+           +F I 
Sbjct: 287 FSKPAYFVSVVENIMAGATVLFLNATDLDR--------SREYGQESIIYSLEGSSQFRIN 338

Query: 92  SRQGDISLMQCLDYETEDSYRFTVYATD-----TLMTTSATVNISVVNVNDWDPRFRYPQ 146
           +R G+I+    LD ET+  Y   V A D        T  ATVN++++++ND  P ++   
Sbjct: 339 ARSGEITTTSLLDRETKAEYILIVRAVDGGVGHNQKTGIATVNVTLLDINDNHPTWKDAP 398

Query: 147 YELFLPHIPLADLT-PGSVIGKVEAADGDKGDRVTL--SLRGPYEKMFSIND-SGHISI- 201
           Y     +I L ++T P S +  V A D D G+  TL  S++ P  K +S+N  +G I   
Sbjct: 399 Y-----YINLVEMTPPDSDVTTVVAVDPDLGENGTLVYSIQPP-NKFYSLNSTTGKIRTT 452

Query: 202 -VDLSALNTSTIQ------LVVVATDTGNPPRQASVPA 232
            V L   N   ++      ++V  TD G PP +A+  A
Sbjct: 453 HVMLDRENPDPVEAELMRKIIVSVTDCGRPPLKATSSA 490



 Score = 48.9 bits (115), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 64/217 (29%), Positives = 98/217 (45%), Gaps = 40/217 (18%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVT-TNKPRDL--RVKYWLSNDYGERFSIS------RQG 95
            FS   Y+V  LEN P  + +L +T T++   L   + Y +     +RF I       R G
Sbjct: 1684 FSPPAYTVHLLENCPPGFSVLQITATDEDSGLNGELVYRIEAGAQDRFLIHPVTGVIRVG 1743

Query: 96   DISLMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLP 152
            + +    +D E ++SYR TV ATD     ++ +ATV I + ++ND  P F  P   + + 
Sbjct: 1744 NAT----IDREEQESYRLTVVATDRGTVPLSGTATVTILIDDINDSRPEFLNPIQTVSV- 1798

Query: 153  HIPLADLTPGSVIGKVEAADGDKGDRV------------TLSLRGPYEKMFSIN-DSGHI 199
               L    PG+VI  V A D D   ++            T  L    E  F++N ++G  
Sbjct: 1799 ---LESTEPGTVIANVTAIDLDLNPKLEYHILSIVAKDDTDRLVPDQEDAFAVNINTG-- 1853

Query: 200  SIVDLSALN-----TSTIQLVVVATDTGNPPRQASVP 231
            S++  S LN     T  + L V+   +  P R  SVP
Sbjct: 1854 SVIVKSPLNRELVATYEVTLSVIDNASDLPERSVSVP 1890



 Score = 44.3 bits (103), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 55/202 (27%), Positives = 87/202 (43%), Gaps = 22/202 (10%)

Query: 43   LQFSKNEYSVSALENLPVNYVLLTVTTNKPRDL-----RVKYWLSNDYGERFSISR-QGD 96
            +QFS   Y    +ENL +   ++ V      +L     R   + S      F I    G 
Sbjct: 927  VQFSNASYEAVIMENLALGTEIVRVQAYSIDNLNQITYRFDAYTSAQAKALFKIDAITGV 986

Query: 97   ISLMQCLDYETEDSYRFTVYATDTLMTTSATV-NISVVNVNDWDPRFRYPQYELFLPHIP 155
            I++   +D E  D Y  TV A D      +TV  ++V++ ND  PRF +         +P
Sbjct: 987  ITVKGLVDREKGDFYTLTVVADDGGPKVDSTVVYVTVLDENDNSPRFDFTSDSAI--SVP 1044

Query: 156  LADLTPGSVIGKVEAADGDKGD--RVTLSLR-----GPYEKMFSINDSGHISI---VDLS 205
              D   G  +  V+A D D G   +V  SL      G +E + S +  G + +   +D  
Sbjct: 1045 -EDCPVGQRVATVKARDPDAGSNGQVVFSLASGNIAGAFEIITSNDSIGEVFVAKPLDRE 1103

Query: 206  ALNTSTIQLVVVATDTGNPPRQ 227
             L+   ++  +VA+D G PPR+
Sbjct: 1104 ELDHYILK--IVASDRGTPPRK 1123



 Score = 42.7 bits (99), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 40/137 (29%), Positives = 64/137 (46%), Gaps = 29/137 (21%)

Query: 65  LTVTTNKPRDLRVKYWLS---NDYG---------------ERFSIS-RQGDISLMQCLDY 105
           ++V+ + PR+ RV  WL+   ND G                +FS+  R   +  +  LD 
Sbjct: 618 VSVSEDVPREFRV-VWLNCTDNDVGLNAELSYFITAGNVDGKFSVGYRDAVVRTVVGLDR 676

Query: 106 ETEDSYRFTVYATDT-----LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLT 160
           ET  +Y   + A D        T +ATV ++V++VND  P F    YE  +P     D+ 
Sbjct: 677 ETTAAYTLVLEAIDNGPVGKRRTGTATVFVTVLDVNDNRPIFLQSSYEASVPE----DIP 732

Query: 161 PGSVIGKVEAADGDKGD 177
            G  I +++A D D+G+
Sbjct: 733 EGHSIVQLKATDADEGE 749



 Score = 40.4 bits (93), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 42/142 (29%), Positives = 66/142 (46%), Gaps = 15/142 (10%)

Query: 90  SISRQGDISLMQC--LDYETEDSYRFTVYATDTL--MTTSATVNISVVNVNDWDPRFRYP 145
           S+  + DI +     LDYET D Y F ++A +++      A V I+++N ND  P F  P
Sbjct: 20  SVQGKADIRIRVAIPLDYETVDRYDFDLFANESVPDHVGYAKVKITLINENDNRPIFSQP 79

Query: 146 QYELFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDSGHISIVD 203
            Y + L      ++T G+ +  V A D D G    V        ++     D+G I ++ 
Sbjct: 80  LYNVSL----YENITVGTSVLTVLATDNDVGTFGEVNYFFSDDPDRFSLDKDTGLIMLI- 134

Query: 204 LSALNTSTIQ---LVVVATDTG 222
            + L+   IQ   L V+A D G
Sbjct: 135 -ARLDYELIQRFTLTVIARDGG 155


>gi|350587824|ref|XP_003482493.1| PREDICTED: protocadherin Fat 4-like [Sus scrofa]
          Length = 1741

 Score = 61.2 bits (147), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 61/192 (31%), Positives = 90/192 (46%), Gaps = 24/192 (12%)

Query: 50  YSVSALENLPVNYVLLTVTTNKPRDLRV----KYWLSNDYGERFSIS-RQGDISLMQCLD 104
           +S    EN P+ Y +  VTT+   D+ V    +Y +  D    F I+   GDI + + L+
Sbjct: 562 FSAHVPENSPLGYTVTRVTTSD-EDIGVNAISRYSIM-DTSLPFIINPSTGDIVISRPLN 619

Query: 105 YETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSV 164
            E  D YR  V A D+  T S  V I V ++ND  PRF  P Y L  P +P      GS 
Sbjct: 620 REDTDRYRIRVSAHDSGWTVSTDVTIFVTDINDNAPRFSRPSYYLDCPELPEI----GSR 675

Query: 165 IGKVEAADGDKGD--RVTLSLRGPYEKMFSIN-DSGHI---------SIVDLSALNTSTI 212
           + +V A D D+G   +V   ++   E  F IN  +G I         ++   S +N +  
Sbjct: 676 VTQVSATDPDEGSNGQVFYFIKSQSE-YFRINATTGEIFNKQVLKYQNVSGFSNVNINRH 734

Query: 213 QLVVVATDTGNP 224
             +V ++D GNP
Sbjct: 735 SFIVTSSDRGNP 746



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 59/190 (31%), Positives = 95/190 (50%), Gaps = 15/190 (7%)

Query: 56  ENLPVNYVLLTVTTNKPRDLRVKYWL-SNDYGERFSISR-QGDISLMQCLDYETEDSYRF 113
           EN PV  ++ T+T +  R   + Y++ S + G  F I +  G +S+ Q LD+E    Y  
Sbjct: 363 ENQPVGTLVTTITGSSLRGEPLSYYIASGNLGNTFQIDQLTGQVSISQALDFEKIQKYVV 422

Query: 114 TVYATDTLM---TTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEA 170
            + A D      +    ++I+V++VND  P F+    + F+  I L +L+P  ++  V A
Sbjct: 423 WIEARDGGFPPFSAYEKLDITVLDVNDNSPVFKE---DPFVSEI-LENLSPRKIL-TVSA 477

Query: 171 ADGDKGDRVTLS---LRGPYEKMFSINDS-GHI-SIVDLSALNTSTIQLVVVATDTGNPP 225
            D D G    L    + G  E  FSIN + G I SI  L    T+   L + ++D G+P 
Sbjct: 478 VDKDSGPNGQLDYEIVNGNREHSFSINHATGEIRSIRPLDREKTAQYVLTIKSSDKGSPS 537

Query: 226 RQASVPAIMH 235
           + ASV  I++
Sbjct: 538 QSASVKVIIN 547



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 52/177 (29%), Positives = 83/177 (46%), Gaps = 13/177 (7%)

Query: 68  TTNKPRDLRVKYWLSNDYGERFSIS-RQGDISLMQCLDYETEDSYRFTVYATDTL----M 122
           T   P+D   +++       +F+I+   G I     LD ET+++Y   V A+D      +
Sbjct: 172 TKPAPKDGEAEHYRIIGGNSQFTINPSTGQIITSALLDRETKENYTLVVVASDAGSPEPL 231

Query: 123 TTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTL- 181
           ++S +V ++V +VND  PRF   Q+  ++ HIP +   PGS +  V   D D G    L 
Sbjct: 232 SSSTSVLVTVTDVNDNPPRF---QHHPYVTHIP-SPTPPGSFVFAVTVTDADVGPNSELH 287

Query: 182 -SLRGPYEKMFSINDSGHISIVDLSALN-TSTIQLVVVATDTGNPPRQASVPAIMHF 236
            SL G   + F I D    +I+    LN  S +   V   D+G+ P+  S    + F
Sbjct: 288 YSLSGRNSEKFHI-DPLRGAIMAAGPLNGASEVTFSVHVKDSGSFPKTDSTTVTVRF 343



 Score = 46.6 bits (109), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 48/172 (27%), Positives = 79/172 (45%), Gaps = 17/172 (9%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGERFSIS-RQGDISLM 100
            F  +EY  + LEN P    ++ +     +   +  + Y + +   + F I    G I+  
Sbjct: 979  FLPDEYFPTVLENAPSGTTVIHLNATDADSGTNAVIAYTVQSSDSDLFVIDPNTGVITTQ 1038

Query: 101  QCLDYETEDSYRFTVYA---TDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLA 157
              LD+ET+ SY  TV A    D    + ATVNI +   N++ PRF    Y     +  ++
Sbjct: 1039 GFLDFETKQSYHLTVKAFNVPDEERCSFATVNIQLKGTNEYVPRFVSKLY-----YFEIS 1093

Query: 158  DLTP-GSVIGKVEAAD---GDKGDRVTLSLRGPYEKMFSIN-DSGHISIVDL 204
            +  P G+++G+V A+D   G  G+   L      +K F IN  +G I +  L
Sbjct: 1094 EAAPKGTIVGEVFASDRDLGTDGEVHYLLFGNSRKKGFQINKKTGQIYVSGL 1145



 Score = 43.1 bits (100), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 41/148 (27%), Positives = 73/148 (49%), Gaps = 14/148 (9%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLR----VKYWLSNDYGER-FSI-SRQGDI 97
            +FS++  S +  E+  +  ++ TV+  + RD      V+Y +S+   E  F+I S  G +
Sbjct: 873  EFSQSHMSATIPESHSIGAIVRTVSA-RDRDTAMNGLVRYSISSGNEEGIFAINSSTGIL 931

Query: 98   SLMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHI 154
            +L + LDYE    +  T+ ATD      T   +V ++V++VND  P F   +Y    P +
Sbjct: 932  TLAKALDYELCQKHEMTISATDGGWVARTGYCSVTVNVIDVNDNSPVFLPDEY---FPTV 988

Query: 155  PLADLTPGSVIGKVEAADGDKGDRVTLS 182
             L +   G+ +  + A D D G    ++
Sbjct: 989  -LENAPSGTTVIHLNATDADSGTNAVIA 1015



 Score = 39.3 bits (90), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 31/108 (28%), Positives = 55/108 (50%), Gaps = 7/108 (6%)

Query: 89   FSISRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYP 145
            FS++  G +S  + +D E    +  +V   D+    M+++ TV+I+V++ ND   + R  
Sbjct: 1343 FSLNTAGVLSTTREIDREQIADFYLSVVTRDSGVPQMSSTGTVHITVIDQNDNPSQSR-- 1400

Query: 146  QYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSI 193
              E+F+ +    +L PG ++G V+  D D  D    SL      +FSI
Sbjct: 1401 TVEIFVNY--YGNLFPGGILGSVKPQDPDVLDTFHCSLTSGVTSLFSI 1446


>gi|229442267|gb|AAI72776.1| FAT tumor suppressor 2 precursor [synthetic construct]
          Length = 896

 Score = 61.2 bits (147), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 52/193 (26%), Positives = 90/193 (46%), Gaps = 21/193 (10%)

Query: 43  LQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGER---FSISRQ-GDIS 98
           L F +  YS + +E  PVN+++  ++      L   +W +   G++   F I +  G I 
Sbjct: 7   LAFDETYYSFTVMETDPVNHMVGVISVEGRPGL---FWFNISGGDKDMDFDIEKTTGSIV 63

Query: 99  LMQCLDYETEDSYRFTVYATDTLMTTSATVNISVV-NVNDWDPRFRYPQYELFLPHIPLA 157
           + + LD     +Y  TV  TD   T +  V+I ++ N+N   P+F   +YE+ +P     
Sbjct: 64  IARPLDTRRRSNYNLTVEVTDGSRTIATQVHIFMIANINHHRPQFLETRYEVRVPQ---- 119

Query: 158 DLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSGHISIVDLSALNTSTIQLVVV 217
           D  PG  + +V+A D DKG  +  ++ G         D G  S+  L    +S + + V 
Sbjct: 120 DTVPGVELLRVQAIDQDKGKSLIYTIHGS-------QDPGSASLFQLDP--SSGVLVTVG 170

Query: 218 ATDTGNPPRQASV 230
             D G+ P Q ++
Sbjct: 171 KLDLGSGPSQHTL 183



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 66/242 (27%), Positives = 104/242 (42%), Gaps = 21/242 (8%)

Query: 10  PITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTT 69
           P TL V+A    +   + LAT+I+    +      FSK+EY V   E++PV   +L V+ 
Sbjct: 285 PHTLTVKAEDQGSPQWHDLATVIIHVYPSDRSAPIFSKSEYFVEIPESIPVGSPILLVSA 344

Query: 70  NKPRDLRVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDTLMT-TSATV 128
             P ++  +    N  G     S  G IS  + LD+E   SY+  +  ++     T   V
Sbjct: 345 MSPSEVTYELREGNKDGVFSMNSYSGLISTQKKLDHEKISSYQLKIRGSNMAGAFTDVMV 404

Query: 129 NISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGK------VEAADGDKGDRVTLS 182
            + +++ ND  P F       F+  I  A      ++ K      + A+D DK     L 
Sbjct: 405 VVDIIDENDNAPMFL---KSTFVGQISEAAPLYSMIMDKNNNPFVIHASDSDKEANSLLV 461

Query: 183 ---LRGPYEKMFSINDS-GHISIV-DLSALNTSTIQLVVVATDTGNP----PRQASVPAI 233
              L     K F I+ S G ++IV ++   +  + Q  V   D G+P    PR A V  I
Sbjct: 462 YKILEPEALKFFKIDPSMGTLTIVSEMDYESMPSFQFCVYVHDQGSPVLFAPRPAQV--I 519

Query: 234 MH 235
           +H
Sbjct: 520 IH 521



 Score = 41.2 bits (95), Expect = 0.88,   Method: Compositional matrix adjust.
 Identities = 39/133 (29%), Positives = 68/133 (51%), Gaps = 14/133 (10%)

Query: 95  GDISLMQCLDYETEDSYRFTVYATDT-----LMTTSATVNISVVNVNDWDPRFRYPQYEL 149
           G ++++  +DYE+  S++F VY  D           A V I V +VND  PRF    YE+
Sbjct: 480 GTLTIVSEMDYESMPSFQFCVYVHDQGSPVLFAPRPAQVIIHVRDVNDSPPRFSEQIYEV 539

Query: 150 FLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSIND-SGHISIVDLSAL 207
            +    +  + PG  +  V A+D D    V  S++ G  ++  +I+  +G IS+++ + L
Sbjct: 540 AI----VGPIHPGMELLMVRASDEDS--EVNYSIKTGNADEAVTIHPVTGSISVLNPAFL 593

Query: 208 NTSTIQLVVVATD 220
             S  +L + A+D
Sbjct: 594 GLSR-KLTIRASD 605



 Score = 40.8 bits (94), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 58/202 (28%), Positives = 84/202 (41%), Gaps = 24/202 (11%)

Query: 41  RELQFSKNEYSVSALENLPVN--YVLLTVTTNKPRDLRVKYWLSNDYGERFSISRQGDIS 98
           + LQF ++ Y  +  ENL      V+L    N   D  + Y+L N       +   G + 
Sbjct: 624 KSLQFDQDVYWAAVKENLQDRKALVILGAQGNHLND-TLSYFLLNGTDMFHMVQSAGVLQ 682

Query: 99  LMQ-CLDYETEDSYRFTVYATDTLM---TTSATVNISVVNVNDWDPRFRY-PQYELFLPH 153
                 D E +D++   V   D           V +S+ +VND  P+F++ P Y +    
Sbjct: 683 TRGVAFDREQQDTHELAVEVRDNRTPQRVAQGLVRVSIEDVNDNPPKFKHLPYYTI---- 738

Query: 154 IPLADLT-PGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDS-GHISI---VDLSA 206
             + D T PG V+ +V A D D G    VT      Y   F I+   G IS+    D  A
Sbjct: 739 --IQDGTEPGDVLFQVSATDEDLGTNGAVTYEFAEDY-TYFRIDPYLGDISLKKPFDYQA 795

Query: 207 LNTSTIQLVVVATDTGNPPRQA 228
           LN     L V+A D G P  Q+
Sbjct: 796 LN--KYHLKVIARDGGTPSLQS 815


>gi|149038755|gb|EDL93044.1| rCG22004, isoform CRA_b [Rattus norvegicus]
          Length = 2970

 Score = 61.2 bits (147), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 59/195 (30%), Positives = 91/195 (46%), Gaps = 20/195 (10%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWLSNDYGERFSIS-RQGDISLM 100
            F +  Y  +  E++ V  V+L VT           ++Y L +  G +F+I+   GDI ++
Sbjct: 2018 FDQLSYQEAVFEDVAVGTVILRVTATDADSGNFALIEYSLVDGEG-KFAINPNTGDIYVL 2076

Query: 101  QCLDYETEDSYRFTVYATDT-------LMTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
              LD E +D Y  T  A D            S  V I V++VND  P+F  PQ+   +  
Sbjct: 2077 SSLDREKKDHYILTALAKDNPGDVASNRRENSVQVVIRVLDVNDCRPQFSKPQFSTSV-- 2134

Query: 154  IPLADLTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSIN-DSGHISIVDLSALNTS 210
                +   G+ +  + A D D+G   ++T SL GP  + FS++ DSG ++       +  
Sbjct: 2135 --YENEPAGTSVITMLATDQDEGSNGQLTYSLEGPGMEAFSVDMDSGLVT-TQRPLQSYE 2191

Query: 211  TIQLVVVATDTGNPP 225
               L VVATD G PP
Sbjct: 2192 RFNLTVVATDGGEPP 2206



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 65/210 (30%), Positives = 94/210 (44%), Gaps = 28/210 (13%)

Query: 45  FSKNEYSVSALENLPVNYVLLTV--TTNKPRDL-RVKYWLSNDYGERFSISRQ-GDISLM 100
           FS+  Y+VS  EN+ V   +LTV  T N       V Y+ S+D  +RFS+ +  G I L+
Sbjct: 76  FSQPLYNVSLYENITVGTSVLTVLATDNDVGTFGEVNYFFSDD-PDRFSLDKDTGLIMLI 134

Query: 101 QCLDYETEDSYRFTVYATDTL-MTTSATVNISVVNVNDWDPRFRYPQYELFL----PHIP 155
             LDYE    +  TV A D     T+  V I+V++VND  P F+   Y   L    P + 
Sbjct: 135 ARLDYELIQRFTLTVIARDGGGEETTGRVRINVLDVNDNVPTFQKDAYVGALRENEPSV- 193

Query: 156 LADLTPGSVIGKVEAADGDKGDR-------VTLSLRGPYEKMFSINDSGHISI---VDLS 205
                  + + ++ A D D           V  S  G Y  +      G IS+   +D  
Sbjct: 194 -------TQLVRLRATDEDSPPNNLITYSIVNASAFGSYFDISVYEGYGVISVSRPLDYE 246

Query: 206 ALNTSTIQLVVVATDTGNPPRQASVPAIMH 235
            +    I L V+A D GNPP  ++VP  + 
Sbjct: 247 QIPNGLIYLTVMAKDAGNPPLYSTVPVTIE 276



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 67/218 (30%), Positives = 101/218 (46%), Gaps = 44/218 (20%)

Query: 45  FSKNEYSVSALENLPVNY-VLLTVTTNKPRDLRVKYWLSNDYGE-----------RFSI- 91
           FSK  Y VS +EN+     VL    T+  R        S +YG+           +F I 
Sbjct: 287 FSKPAYFVSVVENIMAGATVLFLNATDLDR--------SREYGQESIIYSLEGSSQFRIN 338

Query: 92  SRQGDISLMQCLDYETEDSYRFTVYATD-----TLMTTSATVNISVVNVNDWDPRFRYPQ 146
           +R G+I+    LD ET+  Y   V A D        T  ATVN++++++ND  P ++   
Sbjct: 339 ARSGEITTTSLLDRETKAEYILIVRAVDGGVGHNQKTGIATVNVTLLDINDNHPTWKDAP 398

Query: 147 YELFLPHIPLADLT-PGSVIGKVEAADGDKGDRVTL--SLRGPYEKMFSIND-SGHISI- 201
           Y     +I L ++T P S +  V A D D G+  TL  S++ P  K +S+N  +G I   
Sbjct: 399 Y-----YINLVEMTPPDSDVTTVVAVDPDLGENGTLVYSIQPP-NKFYSLNSTTGKIRTT 452

Query: 202 -VDLSALNTSTIQ------LVVVATDTGNPPRQASVPA 232
            V L   N   ++      ++V  TD G PP +A+  A
Sbjct: 453 HVMLDRENPDPVEAELMRKIIVSVTDCGRPPLKATSSA 490



 Score = 48.9 bits (115), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 64/217 (29%), Positives = 98/217 (45%), Gaps = 40/217 (18%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVT-TNKPRDL--RVKYWLSNDYGERFSIS------RQG 95
            FS   Y+V  LEN P  + +L +T T++   L   + Y +     +RF I       R G
Sbjct: 1685 FSPPAYTVHLLENCPPGFSVLQITATDEDSGLNGELVYRIEAGAQDRFLIHPVTGVIRVG 1744

Query: 96   DISLMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLP 152
            + +    +D E ++SYR TV ATD     ++ +ATV I + ++ND  P F  P   + + 
Sbjct: 1745 NAT----IDREEQESYRLTVVATDRGTVPLSGTATVTILIDDINDSRPEFLNPIQTVSV- 1799

Query: 153  HIPLADLTPGSVIGKVEAADGDKGDRV------------TLSLRGPYEKMFSIN-DSGHI 199
               L    PG+VI  V A D D   ++            T  L    E  F++N ++G  
Sbjct: 1800 ---LESTEPGTVIANVTAIDLDLNPKLEYHILSIVAKDDTDRLVPDQEDAFAVNINTG-- 1854

Query: 200  SIVDLSALN-----TSTIQLVVVATDTGNPPRQASVP 231
            S++  S LN     T  + L V+   +  P R  SVP
Sbjct: 1855 SVIVKSPLNRELVATYEVTLSVIDNASDLPERSVSVP 1891



 Score = 44.7 bits (104), Expect = 0.074,   Method: Compositional matrix adjust.
 Identities = 55/203 (27%), Positives = 87/203 (42%), Gaps = 23/203 (11%)

Query: 43   LQFSKNEYSVSALENLPVNYVLLTVTTNKPRDL-----RVKYWLSNDYGERFSISR-QGD 96
            +QFS   Y    +ENL +   ++ V      +L     R   + S      F I    G 
Sbjct: 927  VQFSNASYEAVIMENLALGTEIVRVQAYSIDNLNQITYRFDAYTSAQAKALFKIDAITGV 986

Query: 97   ISLMQCLDYETEDSYRFTVYATDTLMTTSATVNI--SVVNVNDWDPRFRYPQYELFLPHI 154
            I++   +D E  D Y  TV A D      +TV +  +V++ ND  PRF +         +
Sbjct: 987  ITVKGLVDREKGDFYTLTVVADDGGPKVDSTVKVYVTVLDENDNSPRFDFTSDSAI--SV 1044

Query: 155  PLADLTPGSVIGKVEAADGDKGD--RVTLSLR-----GPYEKMFSINDSGHISI---VDL 204
            P  D   G  +  V+A D D G   +V  SL      G +E + S +  G + +   +D 
Sbjct: 1045 P-EDCPVGQRVATVKARDPDAGSNGQVVFSLASGNIAGAFEIITSNDSIGEVFVAKPLDR 1103

Query: 205  SALNTSTIQLVVVATDTGNPPRQ 227
              L+   ++  +VA+D G PPR+
Sbjct: 1104 EELDHYILK--IVASDRGTPPRK 1124



 Score = 43.1 bits (100), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 40/137 (29%), Positives = 64/137 (46%), Gaps = 29/137 (21%)

Query: 65  LTVTTNKPRDLRVKYWLS---NDYG---------------ERFSIS-RQGDISLMQCLDY 105
           ++V+ + PR+ RV  WL+   ND G                +FS+  R   +  +  LD 
Sbjct: 618 VSVSEDVPREFRV-VWLNCTDNDVGLNAELSYFITAGNVDGKFSVGYRDAVVRTVVGLDR 676

Query: 106 ETEDSYRFTVYATDT-----LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLT 160
           ET  +Y   + A D        T +ATV ++V++VND  P F    YE  +P     D+ 
Sbjct: 677 ETTAAYTLVLEAIDNGPVGKRRTGTATVFVTVLDVNDNRPIFLQSSYEASVPE----DIP 732

Query: 161 PGSVIGKVEAADGDKGD 177
            G  I +++A D D+G+
Sbjct: 733 EGHSIVQLKATDADEGE 749



 Score = 40.4 bits (93), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 42/142 (29%), Positives = 66/142 (46%), Gaps = 15/142 (10%)

Query: 90  SISRQGDISLMQC--LDYETEDSYRFTVYATDTL--MTTSATVNISVVNVNDWDPRFRYP 145
           S+  + DI +     LDYET D Y F ++A +++      A V I+++N ND  P F  P
Sbjct: 20  SVQGKADIRIRVAIPLDYETVDRYDFDLFANESVPDHVGYAKVKITLINENDNRPIFSQP 79

Query: 146 QYELFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDSGHISIVD 203
            Y + L      ++T G+ +  V A D D G    V        ++     D+G I ++ 
Sbjct: 80  LYNVSL----YENITVGTSVLTVLATDNDVGTFGEVNYFFSDDPDRFSLDKDTGLIMLI- 134

Query: 204 LSALNTSTIQ---LVVVATDTG 222
            + L+   IQ   L V+A D G
Sbjct: 135 -ARLDYELIQRFTLTVIARDGG 155


>gi|268553775|ref|XP_002634874.1| C. briggsae CBR-CDH-8 protein [Caenorhabditis briggsae]
          Length = 1258

 Score = 61.2 bits (147), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 52/194 (26%), Positives = 90/194 (46%), Gaps = 18/194 (9%)

Query: 44  QFSKNEYSVSALENL-PVNYVLLTVTTNKPRDLRVKYWLSNDYGERFSISRQGDISLMQC 102
           +F K+EY    +EN  P     + V ++ P    V + L  +   +F I++ G+I  ++ 
Sbjct: 37  KFEKSEYQFQVMENREPTVLGGVKVISDGP----VTFELLGENAAKFEIAQSGEIQNLEK 92

Query: 103 LDYETEDSYRFTVYATD-TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTP 161
           +D E  + +   V ATD    +  A + ISV + ND  P F    Y + +       L  
Sbjct: 93  IDREESEKFELIVKATDQNGASAKAQLQISVKDENDNSPIFEKSHYVITVDEGKSEKL-- 150

Query: 162 GSVIGKVEAAD--GDKGDRVTLSLRGPYEKM-FSINDSG--HISIVDLSALNTSTIQLVV 216
                K++A D   +K  ++  S+    EK+   I+  G   I  +D  ++ T+ + L V
Sbjct: 151 -----KIKATDLDAEKNGQIVYSIDQKMEKLPIDISPDGMLFIGAIDRESMETNEVNLTV 205

Query: 217 VATDTGNPPRQASV 230
            A+D+G P R +SV
Sbjct: 206 TASDSGEPKRSSSV 219



 Score = 47.4 bits (111), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 38/125 (30%), Positives = 65/125 (52%), Gaps = 16/125 (12%)

Query: 134 NVNDWDPRFRYPQYELFLPHIPL-ADLTPGSVIGKVEAADGDK---GDRVTLSLRGPYEK 189
           ++ND  P F   +Y      IPL A+++PG VIG+++A D D     + VT S   P   
Sbjct: 238 DINDNAPIFSNSRYS-----IPLDANISPGGVIGRLQATDSDATSPNNYVTYSSANP--- 289

Query: 190 MFSINDSGHISIVDLSALNTS-TIQLVVVATDTGNPPRQASVPAIMHFPEA---IVQQAS 245
            F ++DSG I  +    L+ +  ++  V A+D G+P  QA    +++   A   I  + +
Sbjct: 290 QFKVSDSGEIVFIGPGILDKNVNLEFNVTASDGGDPENQAVAQVVLNEHRAMKSIENELT 349

Query: 246 SKLNS 250
           +++NS
Sbjct: 350 TQINS 354


>gi|449511796|ref|XP_002199166.2| PREDICTED: protocadherin beta-5-like, partial [Taeniopygia guttata]
          Length = 485

 Score = 61.2 bits (147), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 56/199 (28%), Positives = 89/199 (44%), Gaps = 27/199 (13%)

Query: 45  FSKNEYSVSALENLPVNYVLLTV-TTNKPRDLR--VKYWLSNDYGERFSI----SRQGDI 97
           F++ EY    LEN+P   V+LTV  T++   +   + Y LS   G+  S        G I
Sbjct: 108 FTQEEYIAQVLENMPEGSVVLTVLATDQDAGVNGDITYQLSQAVGKSDSAFLIDPITGAI 167

Query: 98  SLMQCLDYETEDSYRFTVYATD-TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
            L + LD+E  +S+  +V ATD   ++    V + VV+VND  P      +   +P    
Sbjct: 168 KLTKPLDFEAAESHEMSVRATDGGGLSAICKVLVEVVDVNDNAPELVVSSFSSPIPE--- 224

Query: 157 ADLTPGSVIGKVEAADGDKG----------DRVTLSLRGPYEKMFSINDSGHISIVDLSA 206
            +  PG+V+      D D G          D+++ SLR  Y+  + +     +++  L  
Sbjct: 225 -NTVPGTVVALFSVRDRDSGANGKISCALEDQLSFSLRPAYKNYYEL-----VTVSALDR 278

Query: 207 LNTSTIQLVVVATDTGNPP 225
             T    L V A D G+PP
Sbjct: 279 EETPQYILSVTAADAGSPP 297


>gi|426255704|ref|XP_004021488.1| PREDICTED: cadherin-23-like isoform 2 [Ovis aries]
          Length = 1114

 Score = 61.2 bits (147), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 60/195 (30%), Positives = 90/195 (46%), Gaps = 20/195 (10%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWLSNDYGERFSIS-RQGDISLM 100
           F +  Y  +  E++PV  V+LTVT           ++Y L +  G +F+IS   GDI ++
Sbjct: 162 FDQLSYQEAVFEDVPVGTVILTVTATDADSGNFALIEYSLVDGEG-KFAISPTTGDIYVL 220

Query: 101 QCLDYETEDSYRFTVYATDT-------LMTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
             LD E +D Y  T  A D            S  V I V++VND  P+F   Q+   +  
Sbjct: 221 SPLDREKKDHYILTALAKDNPGDVASNRRENSVQVVIQVLDVNDCRPQFSKLQFSTSV-- 278

Query: 154 IPLADLTPGSVIGKVEAADGDKGDRVTL--SLRGPYEKMFSIN-DSGHISIVDLSALNTS 210
               +   G+ +  + A D D+G    L  SL GP  + F ++ DSG ++       +  
Sbjct: 279 --YENEPAGTSVITMMATDQDEGSNAELAYSLEGPGVEAFHVDMDSGLVT-TKRPLQSYE 335

Query: 211 TIQLVVVATDTGNPP 225
           +  L VVATD G PP
Sbjct: 336 SFSLTVVATDGGQPP 350



 Score = 38.5 bits (88), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 32/122 (26%), Positives = 56/122 (45%), Gaps = 17/122 (13%)

Query: 125 SATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR 184
           +A + +++++VND  P+F+      +   I L   TPG+ +  V A D DKG    ++  
Sbjct: 36  NAKLTVNILDVNDNTPQFKPFGITYYTERI-LEGATPGTTLIAVAAVDPDKGLNGLITY- 93

Query: 185 GPYEKMFSINDSGHISIVDLSALNTSTIQLV-----------VVATDTGNPPRQASVPAI 233
                + ++   G++ + D SA      Q V           V A+D G+PPR A +P  
Sbjct: 94  ----TLLNLMPPGYVQLEDSSAGKVIANQTVDYEEVHWLNFTVRASDNGSPPRAAEIPVY 149

Query: 234 MH 235
           + 
Sbjct: 150 LE 151


>gi|149038756|gb|EDL93045.1| rCG22004, isoform CRA_c [Rattus norvegicus]
          Length = 2935

 Score = 61.2 bits (147), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 59/195 (30%), Positives = 91/195 (46%), Gaps = 20/195 (10%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWLSNDYGERFSIS-RQGDISLM 100
            F +  Y  +  E++ V  V+L VT           ++Y L +  G +F+I+   GDI ++
Sbjct: 2018 FDQLSYQEAVFEDVAVGTVILRVTATDADSGNFALIEYSLVDGEG-KFAINPNTGDIYVL 2076

Query: 101  QCLDYETEDSYRFTVYATDT-------LMTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
              LD E +D Y  T  A D            S  V I V++VND  P+F  PQ+   +  
Sbjct: 2077 SSLDREKKDHYILTALAKDNPGDVASNRRENSVQVVIRVLDVNDCRPQFSKPQFSTSV-- 2134

Query: 154  IPLADLTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSIN-DSGHISIVDLSALNTS 210
                +   G+ +  + A D D+G   ++T SL GP  + FS++ DSG ++       +  
Sbjct: 2135 --YENEPAGTSVITMLATDQDEGSNGQLTYSLEGPGMEAFSVDMDSGLVT-TQRPLQSYE 2191

Query: 211  TIQLVVVATDTGNPP 225
               L VVATD G PP
Sbjct: 2192 RFNLTVVATDGGEPP 2206



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 65/210 (30%), Positives = 94/210 (44%), Gaps = 28/210 (13%)

Query: 45  FSKNEYSVSALENLPVNYVLLTV--TTNKPRDL-RVKYWLSNDYGERFSISRQ-GDISLM 100
           FS+  Y+VS  EN+ V   +LTV  T N       V Y+ S+D  +RFS+ +  G I L+
Sbjct: 76  FSQPLYNVSLYENITVGTSVLTVLATDNDVGTFGEVNYFFSDD-PDRFSLDKDTGLIMLI 134

Query: 101 QCLDYETEDSYRFTVYATDTL-MTTSATVNISVVNVNDWDPRFRYPQYELFL----PHIP 155
             LDYE    +  TV A D     T+  V I+V++VND  P F+   Y   L    P + 
Sbjct: 135 ARLDYELIQRFTLTVIARDGGGEETTGRVRINVLDVNDNVPTFQKDAYVGALRENEPSV- 193

Query: 156 LADLTPGSVIGKVEAADGDKGDR-------VTLSLRGPYEKMFSINDSGHISI---VDLS 205
                  + + ++ A D D           V  S  G Y  +      G IS+   +D  
Sbjct: 194 -------TQLVRLRATDEDSPPNNLITYSIVNASAFGSYFDISVYEGYGVISVSRPLDYE 246

Query: 206 ALNTSTIQLVVVATDTGNPPRQASVPAIMH 235
            +    I L V+A D GNPP  ++VP  + 
Sbjct: 247 QIPNGLIYLTVMAKDAGNPPLYSTVPVTIE 276



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 67/218 (30%), Positives = 101/218 (46%), Gaps = 44/218 (20%)

Query: 45  FSKNEYSVSALENLPVNY-VLLTVTTNKPRDLRVKYWLSNDYGE-----------RFSI- 91
           FSK  Y VS +EN+     VL    T+  R        S +YG+           +F I 
Sbjct: 287 FSKPAYFVSVVENIMAGATVLFLNATDLDR--------SREYGQESIIYSLEGSSQFRIN 338

Query: 92  SRQGDISLMQCLDYETEDSYRFTVYATD-----TLMTTSATVNISVVNVNDWDPRFRYPQ 146
           +R G+I+    LD ET+  Y   V A D        T  ATVN++++++ND  P ++   
Sbjct: 339 ARSGEITTTSLLDRETKAEYILIVRAVDGGVGHNQKTGIATVNVTLLDINDNHPTWKDAP 398

Query: 147 YELFLPHIPLADLT-PGSVIGKVEAADGDKGDRVTL--SLRGPYEKMFSIND-SGHISI- 201
           Y     +I L ++T P S +  V A D D G+  TL  S++ P  K +S+N  +G I   
Sbjct: 399 Y-----YINLVEMTPPDSDVTTVVAVDPDLGENGTLVYSIQPP-NKFYSLNSTTGKIRTT 452

Query: 202 -VDLSALNTSTIQ------LVVVATDTGNPPRQASVPA 232
            V L   N   ++      ++V  TD G PP +A+  A
Sbjct: 453 HVMLDRENPDPVEAELMRKIIVSVTDCGRPPLKATSSA 490



 Score = 48.9 bits (115), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 64/217 (29%), Positives = 98/217 (45%), Gaps = 40/217 (18%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVT-TNKPRDL--RVKYWLSNDYGERFSIS------RQG 95
            FS   Y+V  LEN P  + +L +T T++   L   + Y +     +RF I       R G
Sbjct: 1685 FSPPAYTVHLLENCPPGFSVLQITATDEDSGLNGELVYRIEAGAQDRFLIHPVTGVIRVG 1744

Query: 96   DISLMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLP 152
            + +    +D E ++SYR TV ATD     ++ +ATV I + ++ND  P F  P   + + 
Sbjct: 1745 NAT----IDREEQESYRLTVVATDRGTVPLSGTATVTILIDDINDSRPEFLNPIQTVSV- 1799

Query: 153  HIPLADLTPGSVIGKVEAADGDKGDRV------------TLSLRGPYEKMFSIN-DSGHI 199
               L    PG+VI  V A D D   ++            T  L    E  F++N ++G  
Sbjct: 1800 ---LESTEPGTVIANVTAIDLDLNPKLEYHILSIVAKDDTDRLVPDQEDAFAVNINTG-- 1854

Query: 200  SIVDLSALN-----TSTIQLVVVATDTGNPPRQASVP 231
            S++  S LN     T  + L V+   +  P R  SVP
Sbjct: 1855 SVIVKSPLNRELVATYEVTLSVIDNASDLPERSVSVP 1891



 Score = 44.7 bits (104), Expect = 0.072,   Method: Compositional matrix adjust.
 Identities = 55/203 (27%), Positives = 87/203 (42%), Gaps = 23/203 (11%)

Query: 43   LQFSKNEYSVSALENLPVNYVLLTVTTNKPRDL-----RVKYWLSNDYGERFSISR-QGD 96
            +QFS   Y    +ENL +   ++ V      +L     R   + S      F I    G 
Sbjct: 927  VQFSNASYEAVIMENLALGTEIVRVQAYSIDNLNQITYRFDAYTSAQAKALFKIDAITGV 986

Query: 97   ISLMQCLDYETEDSYRFTVYATDTLMTTSATVNI--SVVNVNDWDPRFRYPQYELFLPHI 154
            I++   +D E  D Y  TV A D      +TV +  +V++ ND  PRF +         +
Sbjct: 987  ITVKGLVDREKGDFYTLTVVADDGGPKVDSTVKVYVTVLDENDNSPRFDFTSDSAI--SV 1044

Query: 155  PLADLTPGSVIGKVEAADGDKGD--RVTLSLR-----GPYEKMFSINDSGHISI---VDL 204
            P  D   G  +  V+A D D G   +V  SL      G +E + S +  G + +   +D 
Sbjct: 1045 P-EDCPVGQRVATVKARDPDAGSNGQVVFSLASGNIAGAFEIITSNDSIGEVFVAKPLDR 1103

Query: 205  SALNTSTIQLVVVATDTGNPPRQ 227
              L+   ++  +VA+D G PPR+
Sbjct: 1104 EELDHYILK--IVASDRGTPPRK 1124



 Score = 42.7 bits (99), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 40/137 (29%), Positives = 64/137 (46%), Gaps = 29/137 (21%)

Query: 65  LTVTTNKPRDLRVKYWLS---NDYG---------------ERFSIS-RQGDISLMQCLDY 105
           ++V+ + PR+ RV  WL+   ND G                +FS+  R   +  +  LD 
Sbjct: 618 VSVSEDVPREFRV-VWLNCTDNDVGLNAELSYFITAGNVDGKFSVGYRDAVVRTVVGLDR 676

Query: 106 ETEDSYRFTVYATDT-----LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLT 160
           ET  +Y   + A D        T +ATV ++V++VND  P F    YE  +P     D+ 
Sbjct: 677 ETTAAYTLVLEAIDNGPVGKRRTGTATVFVTVLDVNDNRPIFLQSSYEASVPE----DIP 732

Query: 161 PGSVIGKVEAADGDKGD 177
            G  I +++A D D+G+
Sbjct: 733 EGHSIVQLKATDADEGE 749



 Score = 40.4 bits (93), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 42/142 (29%), Positives = 66/142 (46%), Gaps = 15/142 (10%)

Query: 90  SISRQGDISLMQC--LDYETEDSYRFTVYATDTL--MTTSATVNISVVNVNDWDPRFRYP 145
           S+  + DI +     LDYET D Y F ++A +++      A V I+++N ND  P F  P
Sbjct: 20  SVQGKADIRIRVAIPLDYETVDRYDFDLFANESVPDHVGYAKVKITLINENDNRPIFSQP 79

Query: 146 QYELFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDSGHISIVD 203
            Y + L      ++T G+ +  V A D D G    V        ++     D+G I ++ 
Sbjct: 80  LYNVSL----YENITVGTSVLTVLATDNDVGTFGEVNYFFSDDPDRFSLDKDTGLIMLI- 134

Query: 204 LSALNTSTIQ---LVVVATDTG 222
            + L+   IQ   L V+A D G
Sbjct: 135 -ARLDYELIQRFTLTVIARDGG 155


>gi|351708750|gb|EHB11669.1| Cadherin EGF LAG seven-pass G-type receptor 2 [Heterocephalus
           glaber]
          Length = 2976

 Score = 61.2 bits (147), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 66/219 (30%), Positives = 99/219 (45%), Gaps = 22/219 (10%)

Query: 25  RYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWL 81
           R ALATL +    T+  +  F + EY  S  ENL V Y +LTV     + P +  + Y L
Sbjct: 330 RSALATLTILVTDTNDHDPVFEQQEYKESLRENLEVGYEVLTVRATDGDAPPNANILYRL 389

Query: 82  SNDYG----ERFSIS-RQGDISLMQCLDYETEDSYRFTVYATDT-----LMTTSATVNIS 131
               G    E F I  R G I     +D E  +SY+  V A+D        + +A V +S
Sbjct: 390 LEGSGGSPSEVFEIDPRSGVIRTRGPVDREEVESYKLIVEASDQGRDPGPRSATAAVFLS 449

Query: 132 VVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYE 188
           V + ND  P+F   +Y + +      D+ PG+ + ++ A+D DKG    +    + G   
Sbjct: 450 VEDDNDNAPQFSEKRYVVQV----REDVAPGAPVLRITASDRDKGSNALVHYSIMSGNAR 505

Query: 189 KMFSIN-DSGHISIVD-LSALNTSTIQLVVVATDTGNPP 225
             F ++  +G + +V  L    T    L V A D G PP
Sbjct: 506 GQFYLDAQTGALDVVSPLDYETTKEYTLRVRAQDGGRPP 544



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 50/171 (29%), Positives = 80/171 (46%), Gaps = 15/171 (8%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGERFSIS---RQGDIS 98
           F    +  + LE++P+ Y++L V     +   + R++Y L+   G  F  +     G IS
Sbjct: 566 FVSTPFQATVLESVPLGYLVLHVQAIDADAGDNARLEYRLAG-VGHDFPFTINNGTGWIS 624

Query: 99  LMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIP 155
           +   LD E  D Y F V A D     +T SA+V++++V+VND +P F  P+Y + L    
Sbjct: 625 VAAELDREEVDFYSFGVEARDHGTPALTASASVSVTIVDVNDNNPTFTQPEYTVRLNE-- 682

Query: 156 LADLTPGSVIGKVEAADGDKGDRVTLSL-RGPYEKMFSINDSGHISIVDLS 205
             D   G+ +  V A D D    +T  +  G     FSI       +V L+
Sbjct: 683 --DAAVGTSVVTVSAVDRDAHSVITYQITSGNTRNRFSITSQSGGGLVSLA 731



 Score = 44.7 bits (104), Expect = 0.078,   Method: Compositional matrix adjust.
 Identities = 50/189 (26%), Positives = 86/189 (45%), Gaps = 14/189 (7%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRDLR--VKYWL-SNDYGERFSISRQ---GDIS 98
           F++ EY+V   E+  V   ++TV+    RD    + Y + S +   RFSI+ Q   G +S
Sbjct: 671 FTQPEYTVRLNEDAAVGTSVVTVSAVD-RDAHSVITYQITSGNTRNRFSITSQSGGGLVS 729

Query: 99  LMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLAD 158
           L   LDY+ E  Y   V A+D     +A + ++V + N   P F+   Y + +      D
Sbjct: 730 LALPLDYKLERQYVLAVTASDGTRQDTAQIVVNVTDANTHRPVFQSSHYTVNVNE----D 785

Query: 159 LTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSINDSGHISI-VDLSALNTSTIQLV 215
              G+ +  + A D D G+  R+T  +     +     D+G ++   +L   +  +  L 
Sbjct: 786 RPAGTTVVLISATDEDTGENARITYFMEDSIPQFRIDADTGAVTTQAELDYEDQVSYTLA 845

Query: 216 VVATDTGNP 224
           + A D G P
Sbjct: 846 ITARDNGIP 854



 Score = 44.3 bits (103), Expect = 0.098,   Method: Compositional matrix adjust.
 Identities = 42/160 (26%), Positives = 73/160 (45%), Gaps = 10/160 (6%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWL-SNDYGERFSIS-RQGDISL 99
            F ++E+ V   EN P+   +  VT   P +    ++ Y +   +  E F +    G+++ 
Sbjct: 982  FEQDEFDVFVEENSPIGLAVARVTATDPDEGTNAQIMYQIVEGNIPEVFQLDIFSGELTA 1041

Query: 100  MQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPH--IPLA 157
            +  LDYE    Y   + AT   + + ATV++ +++ ND  P      +E+   +     +
Sbjct: 1042 LVDLDYEDRPEYILVIQATSAPLVSRATVHVRLLDRNDNPPVLG--NFEILFNNYVTNRS 1099

Query: 158  DLTPGSVIGKVEAADGDKGDRVTLSL-RGPYEKMFSINDS 196
               PG  IG+V A D D  D +T S  RG    +  +N S
Sbjct: 1100 SSFPGGAIGRVPAHDPDISDSLTYSFERGNELSLVLLNGS 1139


>gi|291407990|ref|XP_002720200.1| PREDICTED: protocadherin 11 X-linked isoform 1 [Oryctolagus
           cuniculus]
          Length = 1350

 Score = 61.2 bits (147), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 81/280 (28%), Positives = 118/280 (42%), Gaps = 65/280 (23%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGE-------------RFSI 91
           F+ NEY+    ENLP +  +  +T   P           DYGE              F+I
Sbjct: 570 FTHNEYNFYVPENLPRHGTVGLITVTDP-----------DYGENSAVTLSIVDVNDEFTI 618

Query: 92  SRQ-GDISLMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYP-- 145
             Q G I      D E ++SY F V A D      +++A V I+VV+VND  P F  P  
Sbjct: 619 DPQTGVIRPNISFDREKQESYTFYVKAEDGGRVSRSSTAKVTINVVDVNDNKPVFVIPPS 678

Query: 146 --QYELFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIND--SGHI 199
              YEL LP        PG+V+ +V A D D G    +  S+ G   K   I D  SG+I
Sbjct: 679 NYSYELVLP-----STNPGAVVFQVVAVDNDTGMNAEIRYSIAGGNAKGLFIIDQTSGNI 733

Query: 200 SIVDLSAL-NTSTIQLVVVATDTGNPPRQASVPAIMHFPEAIVQQA-------------- 244
           ++ +   + +    +LVV A D G P    +V  +  F    V  A              
Sbjct: 734 TLKEKCVVADLGLHRLVVKAKDLGQPDSLFNVIVVNLFVNESVTNATLINELVHKSIETP 793

Query: 245 ------SSKLNSGTSSTVLIILGVVLIVLGFVIILLILYI 278
                 ++  +S TS  V I+   V IV G + ++L+++I
Sbjct: 794 VTQNVETADASSPTSDYVKIM---VAIVAGTITVILVIFI 830



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 36/117 (30%), Positives = 61/117 (52%), Gaps = 10/117 (8%)

Query: 73  RDLRVKYWLSNDYGERFSIS-RQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATV 128
           R+  + Y L  D    F++  R G ++ ++ LD E ++ Y FTV A D     + T+ATV
Sbjct: 497 RNAEINYLLGTDAPPEFNLDHRTGILTAVKKLDREKQEKYYFTVLAKDNGIPPLITNATV 556

Query: 129 NISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDR--VTLSL 183
            ++V++ ND  P F + +Y  ++P     +L     +G +   D D G+   VTLS+
Sbjct: 557 LVTVLDQNDNSPIFTHNEYNFYVPE----NLPRHGTVGLITVTDPDYGENSAVTLSI 609


>gi|119514222|gb|ABL75885.1| protocadherin 2G10 [Takifugu rubripes]
          Length = 941

 Score = 61.2 bits (147), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 56/199 (28%), Positives = 101/199 (50%), Gaps = 20/199 (10%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKP-----RDLRVKYWLSNDYGERFSIS-RQGDIS 98
           FS+  Y  S  EN P++ V++ V+          ++   + L ++  + FS++ + G++ 
Sbjct: 238 FSQAVYKASLPENSPLDTVVMQVSATDADEGVNSEITYGFNLVSEERQPFSLNLKTGEVR 297

Query: 99  LMQCLDYETEDSYRFTVYATDTL-MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLA 157
           L   +DYETE +Y   + A D L + + AT+ I V +VND  P  +       +P     
Sbjct: 298 LASSIDYETESTYELQISAKDGLGLGSYATLIIEVTDVNDNAPVIQLKSLTNPVPE---- 353

Query: 158 DLTPGSVIG--KVEAADGDKGDRVTLSLRG--PYEKMFSINDSGHISIVDLSALN---TS 210
           D++PGS +G   V+  D +K  +V  S++   P++ + SI +  + S+V    L+    S
Sbjct: 354 DVSPGSEVGIINVQDRDSEKNRQVRCSIQQNVPFKLVPSIKN--YYSLVTTGQLDRELVS 411

Query: 211 TIQLVVVATDTGNPPRQAS 229
              + + ATD G+PP  +S
Sbjct: 412 DYNITISATDEGSPPLSSS 430



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 71/272 (26%), Positives = 116/272 (42%), Gaps = 35/272 (12%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRDLR----VKYWL--SNDYGERFS--ISRQGD 96
           F +  YS    EN      L +V+   P D R    V Y L  +   G   S  +S  GD
Sbjct: 447 FEEESYSAYVSENNRAGSTLCSVSAGDP-DWRQNGTVIYSLLAAEVNGAPVSSYVSVNGD 505

Query: 97  ISLMQC---LDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYE-- 148
             L+      DYE   S++  V A D     ++++ TV++ + +VND  P+  YP  E  
Sbjct: 506 TGLIHAVRSFDYEQLRSFKVHVMARDNGSPPLSSNVTVSVFISDVNDNSPQILYPAPEGN 565

Query: 149 LFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-DSGHISIV-D 203
            F+  +       GS++ KV A D D G    LS   ++     +FSI   SG I    D
Sbjct: 566 SFMTELVPKAAHGGSLVSKVIAVDADSGQNAWLSYHIVKSSDPGLFSIGVHSGEIRTQRD 625

Query: 204 LSALNTSTIQLVVVATDTGNPPRQASVPAIMHFPEAIVQ----------QASSKLNSGTS 253
           +S  ++    L+V   D G P   A+    +   + + +          + +SKL   TS
Sbjct: 626 ISESDSMKQNLIVAVKDNGQPSLSATCSMYLLISDNLAEVPELKDISYDEKNSKL---TS 682

Query: 254 STVLIILGVVLIVLGFVIILLILYIHKNKHTK 285
             ++ ++ V    L F+II+L +   + +  +
Sbjct: 683 YLIIALVSVSTFFLTFIIIILGVRFCRRRKPR 714


>gi|119514224|gb|ABL75887.1| protocadherin 2G12 [Takifugu rubripes]
          Length = 941

 Score = 61.2 bits (147), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 56/199 (28%), Positives = 101/199 (50%), Gaps = 20/199 (10%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKP-----RDLRVKYWLSNDYGERFSIS-RQGDIS 98
           FS+  Y  S  EN P++ V++ V+          ++   + L ++  + FS++ + G++ 
Sbjct: 238 FSQAVYKASLPENSPLDTVVMQVSATDADEAVNSEITYGFNLVSEERQPFSLNLKTGEVR 297

Query: 99  LMQCLDYETEDSYRFTVYATDTL-MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLA 157
           L   +DYETE +Y   + A D L + + AT+ I V +VND  P  +       +P     
Sbjct: 298 LASSIDYETESTYELQISAKDGLGLGSYATLIIEVTDVNDNAPVIQLKSLTNPVPE---- 353

Query: 158 DLTPGSVIG--KVEAADGDKGDRVTLSLRG--PYEKMFSINDSGHISIVDLSALN---TS 210
           D++PGS +G   V+  D +K  +V  S++   P++ + SI +  + S+V    L+    S
Sbjct: 354 DVSPGSEVGIINVQDRDSEKNRQVRCSIQQNVPFKLVPSIKN--YYSLVTTGQLDRELVS 411

Query: 211 TIQLVVVATDTGNPPRQAS 229
              + + ATD G+PP  +S
Sbjct: 412 DYNITISATDEGSPPLSSS 430



 Score = 54.7 bits (130), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 71/272 (26%), Positives = 116/272 (42%), Gaps = 35/272 (12%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRDLR----VKYWL--SNDYGERFS--ISRQGD 96
           F +  YS    EN      L +V+   P D R    V Y L  +   G   S  +S  GD
Sbjct: 447 FEEESYSAYVSENNRAGSALCSVSAGDP-DWRQNGTVIYSLLAAEVNGAPVSSYVSVNGD 505

Query: 97  ISLMQC---LDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYE-- 148
             L+      DYE   S++  V A D     ++++ TV++ + +VND  P+  YP  E  
Sbjct: 506 TGLIHAVRSFDYEQLRSFKVHVMARDNGSPPLSSNVTVSVFISDVNDNSPQILYPAPEGN 565

Query: 149 LFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-DSGHISIV-D 203
            F+  +       GS++ KV A D D G    LS   ++     +FSI   SG I    D
Sbjct: 566 SFMTELVPKAAHGGSLVSKVIAVDADSGQNAWLSYHIVKSSDPGLFSIGVHSGEIRTQRD 625

Query: 204 LSALNTSTIQLVVVATDTGNPPRQASVPAIMHFPEAIVQ----------QASSKLNSGTS 253
           +S  ++    L+V   D G P   A+    +   + + +          + +SKL   TS
Sbjct: 626 ISESDSMKQNLIVAVKDNGQPSLSATCSMYLLISDNLAEVPELKDISYDEKNSKL---TS 682

Query: 254 STVLIILGVVLIVLGFVIILLILYIHKNKHTK 285
             ++ ++ V    L F+II+L +   + +  +
Sbjct: 683 YLIIALVSVSTFFLTFIIIILGVRFCRRRKPR 714


>gi|432920160|ref|XP_004079867.1| PREDICTED: protocadherin-7-like [Oryzias latipes]
          Length = 1257

 Score = 61.2 bits (147), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 62/196 (31%), Positives = 88/196 (44%), Gaps = 14/196 (7%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGERFSI-SRQGDISLM 100
           FSKN   VS  EN      + TVT    +  ++  + Y L +     FSI S  GDI + 
Sbjct: 503 FSKNVVQVSFPENNAPGERVTTVTATDADSGKNAEISYSLDSSVNGIFSIDSDSGDIRVN 562

Query: 101 QCLDYETEDSYRFTVYATDTLMTT---SATVNISVVNVNDWDPRFRYPQYELFLPHIPLA 157
             LD E ++ Y F V A D  + T   SATV + V + ND +P+F    +  ++      
Sbjct: 563 TNLDREQKERYEFKVIAKDKGINTLQGSATVVVLVDDKNDNEPKFMQDVFTFYVKE---- 618

Query: 158 DLTPGSVIGKVEAADGDKGDRVTLSL--RGPYEKMFSINDSGHI-SIVDLSALNTSTIQL 214
           +L P S +G V   D DKG    + L      E     N++G I S +       +T   
Sbjct: 619 NLDPNSPVGMVTVIDADKGQNAEMGLFIEEEEEIFSIENETGTIFSTLSFDREQKTTYTF 678

Query: 215 VVVATDTGNPPRQASV 230
            V A D G+PPR A+ 
Sbjct: 679 RVKAVDGGDPPRSATA 694



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 42/158 (26%), Positives = 75/158 (47%), Gaps = 22/158 (13%)

Query: 93  RQGDISLMQCLDYETEDSYRFTVY---ATDTLMTTSATVNISVVNVNDWDPRFRYPQYEL 149
           +Q  + +   LD E  DSY  T+      D   ++ A + + + +VND +PRF    YE 
Sbjct: 224 KQPQLIIKGALDREQRDSYELTLRVRDGGDPPRSSQAILRVMITDVNDNNPRFEKSVYEA 283

Query: 150 FLPHIPLADLTPGSVIGKVEAADGDKG---------DRVTLSLRGPYEKMFSINDS-GHI 199
            LP     + +PGS I +++AAD D G            T S+R    ++  +++S G +
Sbjct: 284 DLPE----NSSPGSPILQLKAADADVGVNGQIEYVFGAATESVR----RLLRLDESTGWL 335

Query: 200 SIVD-LSALNTSTIQLVVVATDTGNPPRQASVPAIMHF 236
           S++  +     S ++  V+A D G PP+      +++ 
Sbjct: 336 SVLHRIDREEVSQLRFTVMARDRGQPPKMDKATVVLNI 373



 Score = 38.9 bits (89), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 72/317 (22%), Positives = 134/317 (42%), Gaps = 46/317 (14%)

Query: 29  ATLIVSKAGTSLRELQFSKNEYSVSALENL----PVNYVLLTVTTNKPRDLRVKYWLSND 84
           AT++V     +  E +F ++ ++    ENL    PV  V + +  +K ++  +  ++  +
Sbjct: 591 ATVVVLVDDKNDNEPKFMQDVFTFYVKENLDPNSPVGMVTV-IDADKGQNAEMGLFIEEE 649

Query: 85  YGERFSISRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPR 141
                  +  G I      D E + +Y F V A D      + +ATV++ V++ ND  P 
Sbjct: 650 EEIFSIENETGTIFSTLSFDREQKTTYTFRVKAVDGGDPPRSATATVSLFVMDENDNAPT 709

Query: 142 FRYP---QYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIND 195
             +P    Y L  P       T  +V+  V A D D G    L+   + G   ++F I+ 
Sbjct: 710 VTFPINSSYTLLPPSS-----TVRTVVRTVIATDTDTGINADLNYSIIGGNPFRLFEIDG 764

Query: 196 S-GHISIV-DLSALNTSTIQLVVVATDTGNPPRQASVPAIMHFPEA----------IVQQ 243
           + G IS++  L   +    +LVV  TD G P +  +    ++  E           + + 
Sbjct: 765 ATGVISLMAKLEQKHYGLHRLVVQVTDNGQPSQSTTTLVHVYVNETLSNSTIVETQVARS 824

Query: 244 ASSKLNSG---------TSSTVLIILGVVLIVLGFVIILLILYIHKNKHTKN-NGPPGSS 293
            S+ LN+          +   + I++GVV  ++  ++I+L++ + +    KN NG     
Sbjct: 825 LSTSLNTNIAGDPNYDLSKQRLSIVIGVVSGIMTVILIILVVVMARYCRPKNKNGYEAGK 884

Query: 294 HSKNDSFLSNVILPEKH 310
               D F      P++H
Sbjct: 885 KDHEDFF-----TPQQH 896


>gi|410974953|ref|XP_003993903.1| PREDICTED: protocadherin-15 isoform 7 [Felis catus]
          Length = 1786

 Score = 61.2 bits (147), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 60/195 (30%), Positives = 99/195 (50%), Gaps = 14/195 (7%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGER-FSISRQ-GDISLMQ 101
           +F +  YS+   E + +  VLL +         + Y + N   +R F++S   G ++L +
Sbjct: 622 RFPQLMYSLEISEAMRIGAVLLNLQATDREGDPITYAIENGDPQRVFNLSETTGILTLGK 681

Query: 102 CLDYETEDSYRFTVYATDTL--MTTSATVNISVVNVNDWDPRFRYPQYELFLP-HIPLAD 158
            LD E+ D Y   V A+D     T++ATVN+ V +VND  P F     + +LP ++ + +
Sbjct: 682 ALDRESTDRYILIVTASDGRPDGTSTATVNVLVTDVNDNAPVF-----DPYLPRNLSVVE 736

Query: 159 LTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDSGHI-SIVDLSALNTSTIQLV 215
               + +G+V A D D G   +V  SL G +  +F I  +G I + V L+       +LV
Sbjct: 737 EEANAFVGQVRATDPDAGINGQVHYSL-GNFNNLFRITSNGSIYTAVKLNREVRDYYELV 795

Query: 216 VVATDTGNPPRQASV 230
           VVATD    PR +++
Sbjct: 796 VVATDGAVHPRHSTL 810



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 66/248 (26%), Positives = 113/248 (45%), Gaps = 34/248 (13%)

Query: 6   DFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVL- 64
           DF Q   LV++A Q +     A A+L +     + +   F+   Y    LE+ PV   + 
Sbjct: 356 DFHQKFDLVIKAEQDNGHPLPAFASLHIEILDENNQSPYFTMPSYQGYILESAPVGATIS 415

Query: 65  --LTVTT------------NKP------RDLRVKYWLSNDYGERFSISRQG---DISLMQ 101
             L +TT            + P      +D  +  +L NDY   F++++ G    ++L+Q
Sbjct: 416 DSLNLTTPLRIVALDKDIEDVPPGGVPTKDPELHLFL-NDYTSVFTVTQTGITRYLTLLQ 474

Query: 102 CLDYETEDSYRFTVYATDTLMTTSAT-VNISVVNVNDWDPRFRYPQYELFLPHIPLADLT 160
            +D E + +Y F++ A D +  +    VNI V++ ND  P F    Y++++      D++
Sbjct: 475 PVDREEQQTYTFSITAFDGVQESEPVIVNIRVMDANDNTPTFPEISYDVYV----YTDMS 530

Query: 161 PGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSIND-SGHISIVDLSALNTS-TIQLVV 216
           PG  + ++ A D D+G    +T  +    +  F+IN  +G I+I    AL    T  L V
Sbjct: 531 PGDSVIQLTAVDADEGSNGEITYEILVGAQGDFTINRTTGLITIAQGVALTVGRTYALTV 590

Query: 217 VATDTGNP 224
            A D   P
Sbjct: 591 QAADNAPP 598



 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 71/233 (30%), Positives = 103/233 (44%), Gaps = 26/233 (11%)

Query: 13   LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKP 72
            LVV A       R++  TL +           F+ + Y+V   ENLP     L +   K 
Sbjct: 794  LVVVATDGAVHPRHSTLTLAIKVLDIDDNSPVFTNSTYTVIVEENLPAGTTFLQIEA-KD 852

Query: 73   RDL--RVKYWLSNDYGERFSISR--QGDISLMQCLDYET----EDSYRFTVYATD---TL 121
             DL   V Y + +   + F       G++SL++ LDYE+    E S  F V A D   T+
Sbjct: 853  VDLGANVSYRIRSPEVKHFFALHPFTGELSLLRSLDYESFPDQEASITFLVEAFDIYGTM 912

Query: 122  MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDK----GD 177
                ATV + V ++ND+ P F    Y+  +      D   G+ I  V A D D       
Sbjct: 913  PPGIATVTVIVKDMNDYPPVFSKRIYKGMV----APDAVKGTPITTVYAEDADPPGLPAS 968

Query: 178  RVTL---SLRGPY-EKMFSIN-DSGH-ISIVDLSALNTSTIQLVVVATDTGNP 224
            RV      ++ PY   +F +  DSG  I+ V+L+   T+  +LVVVA D G P
Sbjct: 969  RVRYRVDDVQFPYPASIFDVEEDSGRVITRVNLNEEPTTIFKLVVVAFDDGEP 1021



 Score = 43.5 bits (101), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 35/119 (29%), Positives = 55/119 (46%), Gaps = 8/119 (6%)

Query: 76  RVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDTLMT---TSATVNISV 132
           +V Y L N +   F I+  G I     L+ E  D Y   V ATD  +    ++ T+ I V
Sbjct: 758 QVHYSLGN-FNNLFRITSNGSIYTAVKLNREVRDYYELVVVATDGAVHPRHSTLTLAIKV 816

Query: 133 VNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMF 191
           ++++D  P F    Y + +      +L  G+   ++EA D D G  V+  +R P  K F
Sbjct: 817 LDIDDNSPVFTNSTYTVIVEE----NLPAGTTFLQIEAKDVDLGANVSYRIRSPEVKHF 871


>gi|410974955|ref|XP_003993904.1| PREDICTED: protocadherin-15 isoform 8 [Felis catus]
          Length = 1788

 Score = 61.2 bits (147), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 60/195 (30%), Positives = 99/195 (50%), Gaps = 14/195 (7%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGER-FSISRQ-GDISLMQ 101
           +F +  YS+   E + +  VLL +         + Y + N   +R F++S   G ++L +
Sbjct: 622 RFPQLMYSLEISEAMRIGAVLLNLQATDREGDPITYAIENGDPQRVFNLSETTGILTLGK 681

Query: 102 CLDYETEDSYRFTVYATDTL--MTTSATVNISVVNVNDWDPRFRYPQYELFLP-HIPLAD 158
            LD E+ D Y   V A+D     T++ATVN+ V +VND  P F     + +LP ++ + +
Sbjct: 682 ALDRESTDRYILIVTASDGRPDGTSTATVNVLVTDVNDNAPVF-----DPYLPRNLSVVE 736

Query: 159 LTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDSGHI-SIVDLSALNTSTIQLV 215
               + +G+V A D D G   +V  SL G +  +F I  +G I + V L+       +LV
Sbjct: 737 EEANAFVGQVRATDPDAGINGQVHYSL-GNFNNLFRITSNGSIYTAVKLNREVRDYYELV 795

Query: 216 VVATDTGNPPRQASV 230
           VVATD    PR +++
Sbjct: 796 VVATDGAVHPRHSTL 810



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 66/248 (26%), Positives = 113/248 (45%), Gaps = 34/248 (13%)

Query: 6   DFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVL- 64
           DF Q   LV++A Q +     A A+L +     + +   F+   Y    LE+ PV   + 
Sbjct: 356 DFHQKFDLVIKAEQDNGHPLPAFASLHIEILDENNQSPYFTMPSYQGYILESAPVGATIS 415

Query: 65  --LTVTT------------NKP------RDLRVKYWLSNDYGERFSISRQG---DISLMQ 101
             L +TT            + P      +D  +  +L NDY   F++++ G    ++L+Q
Sbjct: 416 DSLNLTTPLRIVALDKDIEDVPPGGVPTKDPELHLFL-NDYTSVFTVTQTGITRYLTLLQ 474

Query: 102 CLDYETEDSYRFTVYATDTLMTTSAT-VNISVVNVNDWDPRFRYPQYELFLPHIPLADLT 160
            +D E + +Y F++ A D +  +    VNI V++ ND  P F    Y++++      D++
Sbjct: 475 PVDREEQQTYTFSITAFDGVQESEPVIVNIRVMDANDNTPTFPEISYDVYV----YTDMS 530

Query: 161 PGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSIND-SGHISIVDLSALNTS-TIQLVV 216
           PG  + ++ A D D+G    +T  +    +  F+IN  +G I+I    AL    T  L V
Sbjct: 531 PGDSVIQLTAVDADEGSNGEITYEILVGAQGDFTINRTTGLITIAQGVALTVGRTYALTV 590

Query: 217 VATDTGNP 224
            A D   P
Sbjct: 591 QAADNAPP 598



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 71/233 (30%), Positives = 103/233 (44%), Gaps = 26/233 (11%)

Query: 13   LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKP 72
            LVV A       R++  TL +           F+ + Y+V   ENLP     L +   K 
Sbjct: 794  LVVVATDGAVHPRHSTLTLAIKVLDIDDNSPVFTNSTYTVIVEENLPAGTTFLQIEA-KD 852

Query: 73   RDL--RVKYWLSNDYGERFSISR--QGDISLMQCLDYET----EDSYRFTVYATD---TL 121
             DL   V Y + +   + F       G++SL++ LDYE+    E S  F V A D   T+
Sbjct: 853  VDLGANVSYRIRSPEVKHFFALHPFTGELSLLRSLDYESFPDQEASITFLVEAFDIYGTM 912

Query: 122  MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDK----GD 177
                ATV + V ++ND+ P F    Y+  +      D   G+ I  V A D D       
Sbjct: 913  PPGIATVTVIVKDMNDYPPVFSKRIYKGMV----APDAVKGTPITTVYAEDADPPGLPAS 968

Query: 178  RVTL---SLRGPY-EKMFSIN-DSGH-ISIVDLSALNTSTIQLVVVATDTGNP 224
            RV      ++ PY   +F +  DSG  I+ V+L+   T+  +LVVVA D G P
Sbjct: 969  RVRYRVDDVQFPYPASIFDVEEDSGRVITRVNLNEEPTTIFKLVVVAFDDGEP 1021



 Score = 43.5 bits (101), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 35/119 (29%), Positives = 55/119 (46%), Gaps = 8/119 (6%)

Query: 76  RVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDTLMT---TSATVNISV 132
           +V Y L N +   F I+  G I     L+ E  D Y   V ATD  +    ++ T+ I V
Sbjct: 758 QVHYSLGN-FNNLFRITSNGSIYTAVKLNREVRDYYELVVVATDGAVHPRHSTLTLAIKV 816

Query: 133 VNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMF 191
           ++++D  P F    Y + +      +L  G+   ++EA D D G  V+  +R P  K F
Sbjct: 817 LDIDDNSPVFTNSTYTVIVEE----NLPAGTTFLQIEAKDVDLGANVSYRIRSPEVKHF 871


>gi|410974943|ref|XP_003993898.1| PREDICTED: protocadherin-15 isoform 2 [Felis catus]
          Length = 1793

 Score = 61.2 bits (147), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 60/195 (30%), Positives = 99/195 (50%), Gaps = 14/195 (7%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGER-FSISRQ-GDISLMQ 101
           +F +  YS+   E + +  VLL +         + Y + N   +R F++S   G ++L +
Sbjct: 627 RFPQLMYSLEISEAMRIGAVLLNLQATDREGDPITYAIENGDPQRVFNLSETTGILTLGK 686

Query: 102 CLDYETEDSYRFTVYATDTL--MTTSATVNISVVNVNDWDPRFRYPQYELFLP-HIPLAD 158
            LD E+ D Y   V A+D     T++ATVN+ V +VND  P F     + +LP ++ + +
Sbjct: 687 ALDRESTDRYILIVTASDGRPDGTSTATVNVLVTDVNDNAPVF-----DPYLPRNLSVVE 741

Query: 159 LTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDSGHI-SIVDLSALNTSTIQLV 215
               + +G+V A D D G   +V  SL G +  +F I  +G I + V L+       +LV
Sbjct: 742 EEANAFVGQVRATDPDAGINGQVHYSL-GNFNNLFRITSNGSIYTAVKLNREVRDYYELV 800

Query: 216 VVATDTGNPPRQASV 230
           VVATD    PR +++
Sbjct: 801 VVATDGAVHPRHSTL 815



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 66/248 (26%), Positives = 113/248 (45%), Gaps = 34/248 (13%)

Query: 6   DFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVL- 64
           DF Q   LV++A Q +     A A+L +     + +   F+   Y    LE+ PV   + 
Sbjct: 361 DFHQKFDLVIKAEQDNGHPLPAFASLHIEILDENNQSPYFTMPSYQGYILESAPVGATIS 420

Query: 65  --LTVTT------------NKP------RDLRVKYWLSNDYGERFSISRQG---DISLMQ 101
             L +TT            + P      +D  +  +L NDY   F++++ G    ++L+Q
Sbjct: 421 DSLNLTTPLRIVALDKDIEDVPPGGVPTKDPELHLFL-NDYTSVFTVTQTGITRYLTLLQ 479

Query: 102 CLDYETEDSYRFTVYATDTLMTTSAT-VNISVVNVNDWDPRFRYPQYELFLPHIPLADLT 160
            +D E + +Y F++ A D +  +    VNI V++ ND  P F    Y++++      D++
Sbjct: 480 PVDREEQQTYTFSITAFDGVQESEPVIVNIRVMDANDNTPTFPEISYDVYV----YTDMS 535

Query: 161 PGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSIND-SGHISIVDLSALNTS-TIQLVV 216
           PG  + ++ A D D+G    +T  +    +  F+IN  +G I+I    AL    T  L V
Sbjct: 536 PGDSVIQLTAVDADEGSNGEITYEILVGAQGDFTINRTTGLITIAQGVALTVGRTYALTV 595

Query: 217 VATDTGNP 224
            A D   P
Sbjct: 596 QAADNAPP 603



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 71/233 (30%), Positives = 103/233 (44%), Gaps = 26/233 (11%)

Query: 13   LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKP 72
            LVV A       R++  TL +           F+ + Y+V   ENLP     L +   K 
Sbjct: 799  LVVVATDGAVHPRHSTLTLAIKVLDIDDNSPVFTNSTYTVIVEENLPAGTTFLQIEA-KD 857

Query: 73   RDL--RVKYWLSNDYGERFSISR--QGDISLMQCLDYET----EDSYRFTVYATD---TL 121
             DL   V Y + +   + F       G++SL++ LDYE+    E S  F V A D   T+
Sbjct: 858  VDLGANVSYRIRSPEVKHFFALHPFTGELSLLRSLDYESFPDQEASITFLVEAFDIYGTM 917

Query: 122  MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDK----GD 177
                ATV + V ++ND+ P F    Y+  +      D   G+ I  V A D D       
Sbjct: 918  PPGIATVTVIVKDMNDYPPVFSKRIYKGMV----APDAVKGTPITTVYAEDADPPGLPAS 973

Query: 178  RVTL---SLRGPY-EKMFSIN-DSGH-ISIVDLSALNTSTIQLVVVATDTGNP 224
            RV      ++ PY   +F +  DSG  I+ V+L+   T+  +LVVVA D G P
Sbjct: 974  RVRYRVDDVQFPYPASIFDVEEDSGRVITRVNLNEEPTTIFKLVVVAFDDGEP 1026



 Score = 43.5 bits (101), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 35/119 (29%), Positives = 55/119 (46%), Gaps = 8/119 (6%)

Query: 76  RVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDTLMT---TSATVNISV 132
           +V Y L N +   F I+  G I     L+ E  D Y   V ATD  +    ++ T+ I V
Sbjct: 763 QVHYSLGN-FNNLFRITSNGSIYTAVKLNREVRDYYELVVVATDGAVHPRHSTLTLAIKV 821

Query: 133 VNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMF 191
           ++++D  P F    Y + +      +L  G+   ++EA D D G  V+  +R P  K F
Sbjct: 822 LDIDDNSPVFTNSTYTVIVEE----NLPAGTTFLQIEAKDVDLGANVSYRIRSPEVKHF 876


>gi|348514349|ref|XP_003444703.1| PREDICTED: protocadherin alpha-8-like [Oreochromis niloticus]
          Length = 711

 Score = 61.2 bits (147), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 61/199 (30%), Positives = 90/199 (45%), Gaps = 23/199 (11%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKP---RDLRVKYWL----SNDYGERFSISRQ-GD 96
           FSK+ YSV   EN PV   ++ V    P   ++  V Y      SN+    F I +  G 
Sbjct: 243 FSKDLYSVKLNENAPVGTEVIQVNATDPDHSQNGEVVYSFGNSVSNNVFNLFDIDQSTGK 302

Query: 97  ISLMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
           I++   LDYE +D Y   + A+D     +TT  +V I +V+VND  P      +   +P 
Sbjct: 303 ITVKGLLDYEQKDKYEIEIQASDRGLAPLTTEKSVIIKIVDVNDNAPEIEVTSFSSSIPE 362

Query: 154 IPLADLTPGSVIGKVEAADGDKG--DRVTLSLRG--PYEKMFSINDSGHISIVDLSALN- 208
               D  PG+ +  +   D D G   +V  SL    P+    S+ D  + S+V  S L+ 
Sbjct: 363 ----DSRPGTTVALISVNDLDSGLNGKVICSLGDDVPFALSPSLQDKMY-SLVTKSPLDR 417

Query: 209 --TSTIQLVVVATDTGNPP 225
              S  +L + A D G PP
Sbjct: 418 EKQSQYELTITAKDAGQPP 436



 Score = 42.4 bits (98), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 36/136 (26%), Positives = 61/136 (44%), Gaps = 19/136 (13%)

Query: 103 LDYETEDSYRFTVYATDTL---MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADL 159
           LD E +  Y  T+ A D     +++  T++++V +VND  P F    Y  ++        
Sbjct: 415 LDREKQSQYELTITAKDAGQPPLSSEKTISVAVSDVNDNSPEFSLSPYTFYVTE----GN 470

Query: 160 TPGSVIGKVEAADGDKGDRVTLSLR--------GPYEKMFSINDSGHISIVDLSALNTST 211
            PG+ +  V+A+D D+ D   +S                 +IN S +  I+ L + +  T
Sbjct: 471 NPGASVFSVKASDRDENDNARISYHIIRVGSDDNKVTSFLNIN-SENGDILALKSFDFET 529

Query: 212 I---QLVVVATDTGNP 224
           +   Q  VVA D+G P
Sbjct: 530 LKTFQFQVVAADSGTP 545



 Score = 41.2 bits (95), Expect = 0.96,   Method: Compositional matrix adjust.
 Identities = 28/92 (30%), Positives = 47/92 (51%), Gaps = 8/92 (8%)

Query: 92  SRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYP--- 145
           S  GDI  ++  D+ET  +++F V A D+    ++ + TVN+ +++ ND  P   YP   
Sbjct: 514 SENGDILALKSFDFETLKTFQFQVVAADSGTPSLSNNVTVNVFILDQNDNTPVILYPLSS 573

Query: 146 -QYELFLPHIPLADLTPGSVIGKVEAADGDKG 176
                 +  IP  ++  G ++ KV A D D G
Sbjct: 574 NGSTKGVEEIP-RNVNAGHLVTKVRAYDADIG 604


>gi|291407998|ref|XP_002720204.1| PREDICTED: protocadherin 11 X-linked isoform 5 [Oryctolagus
           cuniculus]
          Length = 1320

 Score = 61.2 bits (147), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 81/280 (28%), Positives = 118/280 (42%), Gaps = 65/280 (23%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGE-------------RFSI 91
           F+ NEY+    ENLP +  +  +T   P           DYGE              F+I
Sbjct: 570 FTHNEYNFYVPENLPRHGTVGLITVTDP-----------DYGENSAVTLSIVDVNDEFTI 618

Query: 92  SRQ-GDISLMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYP-- 145
             Q G I      D E ++SY F V A D      +++A V I+VV+VND  P F  P  
Sbjct: 619 DPQTGVIRPNISFDREKQESYTFYVKAEDGGRVSRSSTAKVTINVVDVNDNKPVFVIPPS 678

Query: 146 --QYELFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIND--SGHI 199
              YEL LP        PG+V+ +V A D D G    +  S+ G   K   I D  SG+I
Sbjct: 679 NYSYELVLP-----STNPGAVVFQVVAVDNDTGMNAEIRYSIAGGNAKGLFIIDQTSGNI 733

Query: 200 SIVDLSAL-NTSTIQLVVVATDTGNPPRQASVPAIMHFPEAIVQQA-------------- 244
           ++ +   + +    +LVV A D G P    +V  +  F    V  A              
Sbjct: 734 TLKEKCVVADLGLHRLVVKAKDLGQPDSLFNVIVVNLFVNESVTNATLINELVHKSIETP 793

Query: 245 ------SSKLNSGTSSTVLIILGVVLIVLGFVIILLILYI 278
                 ++  +S TS  V I+   V IV G + ++L+++I
Sbjct: 794 VTQNVETADASSPTSDYVKIM---VAIVAGTITVILVIFI 830



 Score = 52.4 bits (124), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 36/117 (30%), Positives = 61/117 (52%), Gaps = 10/117 (8%)

Query: 73  RDLRVKYWLSNDYGERFSIS-RQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATV 128
           R+  + Y L  D    F++  R G ++ ++ LD E ++ Y FTV A D     + T+ATV
Sbjct: 497 RNAEINYLLGTDAPPEFNLDHRTGILTAVKKLDREKQEKYYFTVLAKDNGIPPLITNATV 556

Query: 129 NISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDR--VTLSL 183
            ++V++ ND  P F + +Y  ++P     +L     +G +   D D G+   VTLS+
Sbjct: 557 LVTVLDQNDNSPIFTHNEYNFYVPE----NLPRHGTVGLITVTDPDYGENSAVTLSI 609


>gi|291407992|ref|XP_002720201.1| PREDICTED: protocadherin 11 X-linked isoform 2 [Oryctolagus
           cuniculus]
          Length = 1342

 Score = 61.2 bits (147), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 81/280 (28%), Positives = 118/280 (42%), Gaps = 65/280 (23%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGE-------------RFSI 91
           F+ NEY+    ENLP +  +  +T   P           DYGE              F+I
Sbjct: 570 FTHNEYNFYVPENLPRHGTVGLITVTDP-----------DYGENSAVTLSIVDVNDEFTI 618

Query: 92  SRQ-GDISLMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYP-- 145
             Q G I      D E ++SY F V A D      +++A V I+VV+VND  P F  P  
Sbjct: 619 DPQTGVIRPNISFDREKQESYTFYVKAEDGGRVSRSSTAKVTINVVDVNDNKPVFVIPPS 678

Query: 146 --QYELFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIND--SGHI 199
              YEL LP        PG+V+ +V A D D G    +  S+ G   K   I D  SG+I
Sbjct: 679 NYSYELVLP-----STNPGAVVFQVVAVDNDTGMNAEIRYSIAGGNAKGLFIIDQTSGNI 733

Query: 200 SIVDLSAL-NTSTIQLVVVATDTGNPPRQASVPAIMHFPEAIVQQA-------------- 244
           ++ +   + +    +LVV A D G P    +V  +  F    V  A              
Sbjct: 734 TLKEKCVVADLGLHRLVVKAKDLGQPDSLFNVIVVNLFVNESVTNATLINELVHKSIETP 793

Query: 245 ------SSKLNSGTSSTVLIILGVVLIVLGFVIILLILYI 278
                 ++  +S TS  V I+   V IV G + ++L+++I
Sbjct: 794 VTQNVETADASSPTSDYVKIM---VAIVAGTITVILVIFI 830



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 36/117 (30%), Positives = 61/117 (52%), Gaps = 10/117 (8%)

Query: 73  RDLRVKYWLSNDYGERFSIS-RQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATV 128
           R+  + Y L  D    F++  R G ++ ++ LD E ++ Y FTV A D     + T+ATV
Sbjct: 497 RNAEINYLLGTDAPPEFNLDHRTGILTAVKKLDREKQEKYYFTVLAKDNGIPPLITNATV 556

Query: 129 NISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDR--VTLSL 183
            ++V++ ND  P F + +Y  ++P     +L     +G +   D D G+   VTLS+
Sbjct: 557 LVTVLDQNDNSPIFTHNEYNFYVPE----NLPRHGTVGLITVTDPDYGENSAVTLSI 609


>gi|403420604|ref|NP_001258157.1| protocadherin 11 X-linked precursor [Rattus norvegicus]
          Length = 1338

 Score = 61.2 bits (147), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 79/277 (28%), Positives = 117/277 (42%), Gaps = 59/277 (21%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGE-------------RFSI 91
           F+ NEY+    ENLP +  +  +T   P           DYGE             +F+I
Sbjct: 570 FTHNEYNFYVPENLPKHGTVGLITVTDP-----------DYGENSAVTLSVLDVNDQFTI 618

Query: 92  SRQ-GDISLMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYP-- 145
             Q G I      D E ++SY F V A D      +++A V I+VV+VND  P F  P  
Sbjct: 619 DPQSGVIRPNISFDREKQESYTFYVKAEDGGRVSRSSTAKVTINVVDVNDNKPIFIDPPS 678

Query: 146 --QYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIND-SGHI 199
              +E  LP        PG+VI KV A D D G    L    + G  + +F I   SG+I
Sbjct: 679 NYSFEWVLP-----STDPGTVIFKVLAIDNDTGMNAELRYSIVGGNTKGLFMIEQISGNI 733

Query: 200 SIVDLSALNTSTIQLVVV-ATDTGNP-----------PRQASVPAIMHFPEAIVQQASSK 247
           ++ +   ++   +  V+V A D G P               SVP      E + +   S 
Sbjct: 734 TLKEKCMVSDIGLHRVIVKAKDLGQPDSLFNVVNVNLFVNESVPNTTLIYEMVRKSIDSP 793

Query: 248 LN------SGTSSTVLIILGVVLIVLGFVIILLILYI 278
            N      S +S T   +  +V IV G + ++L+++I
Sbjct: 794 ANQNSETTSASSPTTDYVKIMVAIVAGTITVVLVIFI 830



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 62/117 (52%), Gaps = 10/117 (8%)

Query: 73  RDLRVKYWLSNDYGERFSISRQ-GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATV 128
           R+  + Y L  D    F++ R+ G ++ ++ LD E ++ Y FTV A D     + ++ATV
Sbjct: 497 RNAEINYLLGFDAPPEFNLDRRTGILTAVKKLDREKQEKYYFTVLAQDNGIPPLMSNATV 556

Query: 129 NISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDR--VTLSL 183
            ++V++ ND  P F + +Y  ++P     +L     +G +   D D G+   VTLS+
Sbjct: 557 FVTVLDQNDNSPIFTHNEYNFYVPE----NLPKHGTVGLITVTDPDYGENSAVTLSV 609



 Score = 39.3 bits (90), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 37/140 (26%), Positives = 71/140 (50%), Gaps = 17/140 (12%)

Query: 103 LDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLP-HIPLAD 158
           LD E +D+Y   V   D      +++A + +SV + ND  P F   + E+ +P + P+  
Sbjct: 207 LDREEKDTYVMKVKVEDGGFPQRSSTAILQVSVADTNDNRPIFIEKEIEVSIPENAPI-- 264

Query: 159 LTPGSVIGKVEAADGDKGDRVTLS------LRGPYEKMFSIN-DSGHISIVD-LSALNTS 210
              GS + ++ A D D G+   +       +    +++F +N  +G I++ + L    + 
Sbjct: 265 ---GSSVTQLHATDADIGENARIHFYFSNLVSNNAKRLFHLNTTTGLITVKEPLDREESP 321

Query: 211 TIQLVVVATDTGNPPRQASV 230
           + +L+V+ATD G+ P +A V
Sbjct: 322 SHKLLVLATDGGSTPAKAMV 341


>gi|354492231|ref|XP_003508253.1| PREDICTED: protocadherin gamma-A2-like [Cricetulus griseus]
          Length = 814

 Score = 61.2 bits (147), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 56/193 (29%), Positives = 85/193 (44%), Gaps = 17/193 (8%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWLSNDYGERFSI----SRQGDI 97
           F++ EY VS  EN+PV   +LTVT   P +    +V Y+     GE   +    +  GDI
Sbjct: 237 FTQPEYRVSVPENVPVGTRILTVTATDPDEGYNAQVTYFQEQAPGEAADVFELKTTSGDI 296

Query: 98  SLMQCLDYETEDSYRFTVYATDTL-MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
           ++ + LDYE    +   + A D   + T   V ++V++VND  P F        +P    
Sbjct: 297 TITKSLDYEKAKFHEIDIEAQDGPGLLTRTKVVVTVLDVNDNAPEFYMTSATASVPE--- 353

Query: 157 ADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDS--GHISIVDLSALNT---ST 211
            D  PG+VI      D D G    ++   P    F +  S   +  +V   AL+    S 
Sbjct: 354 -DSPPGTVIALFNVHDRDSGQNAVVTCSLPEMFPFKLERSVDNYYRLVTTRALDREEFSF 412

Query: 212 IQLVVVATDTGNP 224
             + + A D GNP
Sbjct: 413 YNITLSAKDGGNP 425



 Score = 48.1 bits (113), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 72/274 (26%), Positives = 116/274 (42%), Gaps = 45/274 (16%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPR---DLRVKYWLSNDYGERFSISR-------Q 94
           F +  YS    EN P    + +V    P    +  V Y L+ D  +   +S         
Sbjct: 447 FPRGSYSAYISENNPRGTSIFSVLAYDPDINDNAHVTYSLAEDTFQGAPLSSYISINSDT 506

Query: 95  GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFL 151
           G +  ++  DYE     +  V A D+    ++++ ++++ +V+ ND  P   YP     L
Sbjct: 507 GVLYALRSFDYEQFQDLQLWVIAVDSGNPPLSSNVSLSLFLVDQNDNMPEILYPA----L 562

Query: 152 P-----HIPLADLT--PGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-DSGHI- 199
           P      + LA  +  PG ++ KV A D D G    LS   L+     +FS+   +G + 
Sbjct: 563 PTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYRLLKASEPGLFSVGLHTGEVR 622

Query: 200 ---SIVDLSALNTSTIQLVVVATDTGNPPRQASVPAIM----HFPEAIVQQASSK--LNS 250
              +++D  AL  S   LVV   D G PP  A+V   +    + PE +    S +   NS
Sbjct: 623 TARALLDRDALKQS---LVVSVQDHGQPPLSATVTLTIAIADNIPEVLADLGSIRTPANS 679

Query: 251 GTSSTVLIILGVV----LIVLGFVIILLILYIHK 280
             S   L ++  V     + L FVI LL L + +
Sbjct: 680 DDSELTLYLVVAVAVVSCVFLAFVIALLALRLRR 713


>gi|291407996|ref|XP_002720203.1| PREDICTED: protocadherin 11 X-linked isoform 4 [Oryctolagus
           cuniculus]
          Length = 1332

 Score = 61.2 bits (147), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 81/280 (28%), Positives = 118/280 (42%), Gaps = 65/280 (23%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGE-------------RFSI 91
           F+ NEY+    ENLP +  +  +T   P           DYGE              F+I
Sbjct: 570 FTHNEYNFYVPENLPRHGTVGLITVTDP-----------DYGENSAVTLSIVDVNDEFTI 618

Query: 92  SRQ-GDISLMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYP-- 145
             Q G I      D E ++SY F V A D      +++A V I+VV+VND  P F  P  
Sbjct: 619 DPQTGVIRPNISFDREKQESYTFYVKAEDGGRVSRSSTAKVTINVVDVNDNKPVFVIPPS 678

Query: 146 --QYELFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIND--SGHI 199
              YEL LP        PG+V+ +V A D D G    +  S+ G   K   I D  SG+I
Sbjct: 679 NYSYELVLP-----STNPGAVVFQVVAVDNDTGMNAEIRYSIAGGNAKGLFIIDQTSGNI 733

Query: 200 SIVDLSAL-NTSTIQLVVVATDTGNPPRQASVPAIMHFPEAIVQQA-------------- 244
           ++ +   + +    +LVV A D G P    +V  +  F    V  A              
Sbjct: 734 TLKEKCVVADLGLHRLVVKAKDLGQPDSLFNVIVVNLFVNESVTNATLINELVHKSIETP 793

Query: 245 ------SSKLNSGTSSTVLIILGVVLIVLGFVIILLILYI 278
                 ++  +S TS  V I+   V IV G + ++L+++I
Sbjct: 794 VTQNVETADASSPTSDYVKIM---VAIVAGTITVILVIFI 830



 Score = 52.4 bits (124), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 36/117 (30%), Positives = 61/117 (52%), Gaps = 10/117 (8%)

Query: 73  RDLRVKYWLSNDYGERFSIS-RQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATV 128
           R+  + Y L  D    F++  R G ++ ++ LD E ++ Y FTV A D     + T+ATV
Sbjct: 497 RNAEINYLLGTDAPPEFNLDHRTGILTAVKKLDREKQEKYYFTVLAKDNGIPPLITNATV 556

Query: 129 NISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDR--VTLSL 183
            ++V++ ND  P F + +Y  ++P     +L     +G +   D D G+   VTLS+
Sbjct: 557 LVTVLDQNDNSPIFTHNEYNFYVPE----NLPRHGTVGLITVTDPDYGENSAVTLSI 609


>gi|307190373|gb|EFN74432.1| Cadherin-related tumor suppressor [Camponotus floridanus]
          Length = 1810

 Score = 61.2 bits (147), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 66/229 (28%), Positives = 111/229 (48%), Gaps = 21/229 (9%)

Query: 11  ITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVT-- 68
           I L+V A       +YA   L V+    +     FSKN   ++  EN P N ++ T+   
Sbjct: 586 IELLVYAQDGGPNTKYANTHLKVTILDENDEAPHFSKNVVQITLSENTPPNSLIATLAAI 645

Query: 69  -----TNKPRDLRVKYWLSNDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDT-- 120
                TN          +S DY + F++ +  G ++    LD ET   YR  + A D   
Sbjct: 646 DNDQGTNGSVVYSFHSCVSRDYPKTFALDALTGQLTTKIALDRETVAEYRILIIAKDQGT 705

Query: 121 -LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTP-GSVIGKVEAADGDKGDR 178
            + +++ATV +++ +VND  P F YP   L    +P+++ +P G++IGKV A D D  + 
Sbjct: 706 PVQSSTATVILTLEDVNDNSPVF-YPWKYL----MPISEDSPAGTIIGKVTATDADAREN 760

Query: 179 VTLS--LRGPYEKMFSIND-SGHISIV-DLSALNTSTIQLVVVATDTGN 223
             +   L    E +F I++ +G I++   L A + +  +L + A DTG+
Sbjct: 761 AQIKYILESGGEGLFVIDERTGEIALQGSLRAAHKTLYELTISAKDTGD 809



 Score = 48.1 bits (113), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 40/108 (37%), Positives = 54/108 (50%), Gaps = 9/108 (8%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTV-TTNKPRDLRVKYWLS----NDYGERFSISRQGDIS 98
            QF +  Y V   E   +   LL V TT+  + L    + S    N +G        G IS
Sbjct: 1257 QFQRLPYRVQVSEGAVIGTQLLRVYTTDADKGLNGDVFYSLEDGNQHGHFIIDEATGQIS 1316

Query: 99   LMQCLDYETEDSYRFTVYATD----TLMTTSATVNISVVNVNDWDPRF 142
            L++ LD ET D+Y  TV A D    T +++SATV I V++ ND  PRF
Sbjct: 1317 LVKELDRETSDTYVLTVVAHDAGLETRLSSSATVYIEVLDENDNVPRF 1364



 Score = 46.6 bits (109), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 49/169 (28%), Positives = 77/169 (45%), Gaps = 14/169 (8%)

Query: 76   RVKYWLSNDYGERFSISRQ-GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNIS 131
            R+ Y L+++ GE+F I+   G I L + +           V ATD+    +++   + ++
Sbjct: 975  RIIYSLTHNPGEQFRIAENSGIIYLNKPIQATPGTILYLEVTATDSGEPSLSSQHQIKVT 1034

Query: 132  VVNVNDWDPRFRYPQYELFLPHIPLADLTP-GSVIGKVEAADGDKG--DRVTLSLR-GPY 187
            + +VND  P FR   YE     I L++ TP       + A D D G   ++  S+  G  
Sbjct: 1035 IEDVNDHTPVFRLTSYE-----ISLSESTPVNKRFFSLIAHDADLGVNGKIRYSVTDGNV 1089

Query: 188  EKMFSINDSGHISIVD-LSALNTSTIQLVVVATDTGNPPRQASVPAIMH 235
            E  F I   G + + + L         L V A D GNP R + VP +MH
Sbjct: 1090 ESSFGIFPDGQLYVKNMLDREERDYYALEVTAFDQGNPSRSSMVPVVMH 1138



 Score = 44.3 bits (103), Expect = 0.095,   Method: Compositional matrix adjust.
 Identities = 48/143 (33%), Positives = 63/143 (44%), Gaps = 11/143 (7%)

Query: 89   FSISRQ-GDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQY 147
            F I +  G IS   CLD E    Y   + A   L     TVNI+V +VND  PRF   + 
Sbjct: 885  FKIDKSTGIISTAGCLDRERVAYYSLQLSARADLAYGQTTVNITVQDVNDNPPRFPRSER 944

Query: 148  --ELFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSL-RGPYEKMFSINDSGHISIV 202
              E+FL      +   G  I    A D D G   R+  SL   P E+     +SG I + 
Sbjct: 945  GDEIFLRE----NAAVGQEICLARARDRDAGANARIIYSLTHNPGEQFRIAENSGIIYLN 1000

Query: 203  D-LSALNTSTIQLVVVATDTGNP 224
              + A   + + L V ATD+G P
Sbjct: 1001 KPIQATPGTILYLEVTATDSGEP 1023



 Score = 38.9 bits (89), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 42/150 (28%), Positives = 70/150 (46%), Gaps = 24/150 (16%)

Query: 87  ERFSISRQGDISLMQCLDYETEDSYRFTVYATDT-LMTTSATV--NISVVNVNDWDPRFR 143
           +R +++R   + +   LD E   +Y  T+ A+D  + + S TV   I V +VND +P F+
Sbjct: 457 DRHTVTRVTLVKINGRLDREEVPTYNLTIVASDKGIPSRSVTVYLGIHVNDVNDHEPVFQ 516

Query: 144 YPQYELFLPHIPLADLTP-GSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSGHISIV 202
             +Y        L++L P GS +  + A D D G    +     Y  + S N+ G  +I 
Sbjct: 517 QSEYSAV-----LSELAPNGSFVASISATDADSGLNAQV-----YYNLESGNNLGWFAID 566

Query: 203 DLSALNTS----------TIQLVVVATDTG 222
             + L T+          +I+L+V A D G
Sbjct: 567 KNTGLVTTVATLDREVQGSIELLVYAQDGG 596


>gi|432952198|ref|XP_004085001.1| PREDICTED: protocadherin gamma-C5-like [Oryzias latipes]
          Length = 822

 Score = 61.2 bits (147), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 58/201 (28%), Positives = 92/201 (45%), Gaps = 27/201 (13%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGER--------FSISR-QG 95
           F K+ Y VS LEN      ++ +   K  D  V   +   +G +        F I++  G
Sbjct: 242 FEKSSYRVSLLENTAKGSFVIKIAATKDSDDGVNGEVEYSFGPQTPDAVLSVFGINKDSG 301

Query: 96  DISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLP 152
           +I L+  LD+ET  SY   V ATD     M    +V+I V++VND  P        +FL 
Sbjct: 302 EIRLIGNLDFETTSSYEIDVSATDKGTPKMEGHCSVHIEVLDVNDNAPY-------IFLT 354

Query: 153 HIPLA---DLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSIND--SGHISIVDLSAL 207
             P +   +   G+V+  + A D D GD   ++L+ P    F +    S + +++   AL
Sbjct: 355 SQPNSVPENAPSGTVVALISARDLDSGDNGKVTLQVPKSSPFKLKASFSDNYALITSRAL 414

Query: 208 NTSTI---QLVVVATDTGNPP 225
           +  T     + + ATD G+PP
Sbjct: 415 DRETFSEYSVEITATDLGSPP 435


>gi|332861140|ref|XP_003317591.1| PREDICTED: protocadherin-11 X-linked-like isoform 1 [Pan
           troglodytes]
 gi|332861142|ref|XP_003317592.1| PREDICTED: protocadherin-11 X-linked-like isoform 2 [Pan
           troglodytes]
          Length = 1054

 Score = 61.2 bits (147), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 76/274 (27%), Positives = 120/274 (43%), Gaps = 40/274 (14%)

Query: 45  FSKNEYSVSALENLPVNYV--LLTVTTNKPRDLRVKYWLSNDYGERFSISRQ-GDISLMQ 101
           F+ NEY+    ENLP +    L+TVT     D         D  + F+I  Q G I    
Sbjct: 599 FTHNEYNFYVPENLPRHGTVGLITVTDPDYGDNSAVTLSILDENDDFTIDSQTGVIRPNI 658

Query: 102 CLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYP----QYELFLPHI 154
             D E ++SY F V A D      ++SA V I+VV+VND  P F  P     YEL LP  
Sbjct: 659 SFDREKQESYTFYVKAEDGGRVSRSSSAKVTINVVDVNDNKPVFIVPPSNYSYELVLPST 718

Query: 155 PLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-DSGHISIVDLSALNTS 210
                 PG+V+ +V A D D G    +    + G    +F+I+ ++G+I++++   +   
Sbjct: 719 -----NPGTVVFQVMAVDNDTGMNAEVRYSIVGGNTRDLFAIDQETGNITLMEKCDVTDL 773

Query: 211 TIQLVVV-ATDTGNPPRQASVPAIMHFPEAIVQQAS--------------------SKLN 249
            +  V+V A D G P    SV  +  F    V  A+                    + ++
Sbjct: 774 GLHRVLVKANDLGQPDSLFSVVIVNLFVNESVTNATLINELVRKSTEAPVTPNTEIADVS 833

Query: 250 SGTSSTVLIILGVVLIVLGFVIILLILYIHKNKH 283
           S TS  V I++  V   +  V+++ I  + + + 
Sbjct: 834 SPTSDYVKILVAAVAGTITVVVVIFITAVVRCRQ 867



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/114 (32%), Positives = 61/114 (53%), Gaps = 10/114 (8%)

Query: 76  RVKYWLSNDYGERFSISRQ-GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNIS 131
            + Y L  D    FS+ R+ G +++++ LD E ED Y FT+ A D     +T++ TV +S
Sbjct: 529 EINYLLGPDAPPEFSLDRRTGMLTVVKKLDREKEDKYLFTILAKDNGVPPLTSNVTVFVS 588

Query: 132 VVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDR--VTLSL 183
           +++ ND  P F + +Y  ++P     +L     +G +   D D GD   VTLS+
Sbjct: 589 IIDQNDNSPVFTHNEYNFYVPE----NLPRHGTVGLITVTDPDYGDNSAVTLSI 638



 Score = 38.1 bits (87), Expect = 7.3,   Method: Compositional matrix adjust.
 Identities = 36/139 (25%), Positives = 67/139 (48%), Gaps = 15/139 (10%)

Query: 103 LDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADL 159
           LD E +D+Y   V   D      +++A + +SV + ND  P F+  + E+ +P     + 
Sbjct: 236 LDREEKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVFKETEIEVSIPE----NA 291

Query: 160 TPGSVIGKVEAADGDKGDRVTLS------LRGPYEKMFSIN-DSGHISIVD-LSALNTST 211
             G+ + ++ A D D G+   +       +     ++F +N  +G I+I + L    T  
Sbjct: 292 PVGTSVTQLHATDADIGENAKIHFSFSNLVSNIARRLFHLNATTGLITIKEPLDREETPN 351

Query: 212 IQLVVVATDTGNPPRQASV 230
            +L+V+A+D G  P +A V
Sbjct: 352 HKLLVLASDGGLMPARAMV 370


>gi|17865345|ref|NP_446096.1| cadherin-23 precursor [Rattus norvegicus]
 gi|17365948|sp|P58365.1|CAD23_RAT RecName: Full=Cadherin-23; AltName: Full=Otocadherin; Flags:
            Precursor
 gi|14625443|dbj|BAB61904.1| KIAA1774 protein [Rattus norvegicus]
          Length = 3317

 Score = 60.8 bits (146), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 59/195 (30%), Positives = 91/195 (46%), Gaps = 20/195 (10%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWLSNDYGERFSIS-RQGDISLM 100
            F +  Y  +  E++ V  V+L VT           ++Y L +  G +F+I+   GDI ++
Sbjct: 2400 FDQLSYQEAVFEDVAVGTVILRVTATDADSGNFALIEYSLVDGEG-KFAINPNTGDIYVL 2458

Query: 101  QCLDYETEDSYRFTVYATDT-------LMTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
              LD E +D Y  T  A D            S  V I V++VND  P+F  PQ+   +  
Sbjct: 2459 SSLDREKKDHYILTALAKDNPGDVASNRRENSVQVVIRVLDVNDCRPQFSKPQFSTSV-- 2516

Query: 154  IPLADLTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSIN-DSGHISIVDLSALNTS 210
                +   G+ +  + A D D+G   ++T SL GP  + FS++ DSG ++       +  
Sbjct: 2517 --YENEPAGTSVITMLATDQDEGSNGQLTYSLEGPGMEAFSVDMDSGLVT-TQRPLQSYE 2573

Query: 211  TIQLVVVATDTGNPP 225
               L VVATD G PP
Sbjct: 2574 RFNLTVVATDGGEPP 2588



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 65/210 (30%), Positives = 94/210 (44%), Gaps = 28/210 (13%)

Query: 45  FSKNEYSVSALENLPVNYVLLTV--TTNKPRDL-RVKYWLSNDYGERFSISRQ-GDISLM 100
           FS+  Y+VS  EN+ V   +LTV  T N       V Y+ S+D  +RFS+ +  G I L+
Sbjct: 458 FSQPLYNVSLYENITVGTSVLTVLATDNDVGTFGEVNYFFSDD-PDRFSLDKDTGLIMLI 516

Query: 101 QCLDYETEDSYRFTVYATDTL-MTTSATVNISVVNVNDWDPRFRYPQYELFL----PHIP 155
             LDYE    +  TV A D     T+  V I+V++VND  P F+   Y   L    P + 
Sbjct: 517 ARLDYELIQRFTLTVIARDGGGEETTGRVRINVLDVNDNVPTFQKDAYVGALRENEPSV- 575

Query: 156 LADLTPGSVIGKVEAADGDKGDR-------VTLSLRGPYEKMFSINDSGHISI---VDLS 205
                  + + ++ A D D           V  S  G Y  +      G IS+   +D  
Sbjct: 576 -------TQLVRLRATDEDSPPNNLITYSIVNASAFGSYFDISVYEGYGVISVSRPLDYE 628

Query: 206 ALNTSTIQLVVVATDTGNPPRQASVPAIMH 235
            +    I L V+A D GNPP  ++VP  + 
Sbjct: 629 QIPNGLIYLTVMAKDAGNPPLYSTVPVTIE 658



 Score = 51.2 bits (121), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 67/218 (30%), Positives = 100/218 (45%), Gaps = 44/218 (20%)

Query: 45  FSKNEYSVSALENLPVNY-VLLTVTTNKPRDLRVKYWLSNDYGE-----------RFSI- 91
           FSK  Y VS +EN+     VL    T+  R        S +YG+           +F I 
Sbjct: 669 FSKPAYFVSVVENIMAGATVLFLNATDLDR--------SREYGQESIIYSLEGSSQFRIN 720

Query: 92  SRQGDISLMQCLDYETEDSYRFTVYATD-----TLMTTSATVNISVVNVNDWDPRFRYPQ 146
           +R G+I+    LD ET+  Y   V A D        T  ATVN++++++ND  P ++   
Sbjct: 721 ARSGEITTTSLLDRETKAEYILIVRAVDGGVGHNQKTGIATVNVTLLDINDNHPTWKDAP 780

Query: 147 YELFLPHIPLADLT-PGSVIGKVEAADGDKGDRVTL--SLRGPYEKMFSIND-SGHISI- 201
           Y     +I L ++T P S +  V A D D G   TL  S++ P  K +S+N  +G I   
Sbjct: 781 Y-----YINLVEMTPPDSDVTTVVAVDPDLGKNGTLVYSIQPP-NKFYSLNSTTGKIRTT 834

Query: 202 -VDLSALNTSTIQ------LVVVATDTGNPPRQASVPA 232
            V L   N   ++      ++V  TD G PP +A+  A
Sbjct: 835 HVMLDRENPDPVEAELMRKIIVSVTDCGRPPLKATSSA 872



 Score = 48.5 bits (114), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 64/217 (29%), Positives = 98/217 (45%), Gaps = 40/217 (18%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVT-TNKPRDL--RVKYWLSNDYGERFSIS------RQG 95
            FS   Y+V  LEN P  + +L +T T++   L   + Y +     +RF I       R G
Sbjct: 2067 FSPPAYTVHLLENCPPGFSVLQITATDEDSGLNGELVYRIEAGAQDRFLIHPVTGVIRVG 2126

Query: 96   DISLMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLP 152
            + +    +D E ++SYR TV ATD     ++ +ATV I + ++ND  P F  P   + + 
Sbjct: 2127 NAT----IDREEQESYRLTVVATDRGTVPLSGTATVTILIDDINDSRPEFLNPIQTVSV- 2181

Query: 153  HIPLADLTPGSVIGKVEAADGDKGDRV------------TLSLRGPYEKMFSIN-DSGHI 199
               L    PG+VI  V A D D   ++            T  L    E  F++N ++G  
Sbjct: 2182 ---LESTEPGTVIANVTAIDLDLNPKLEYHILSIVAKDDTDRLVPDQEDAFAVNINTG-- 2236

Query: 200  SIVDLSALN-----TSTIQLVVVATDTGNPPRQASVP 231
            S++  S LN     T  + L V+   +  P R  SVP
Sbjct: 2237 SVIVKSPLNRELVATYEVTLSVIDNASDLPERSVSVP 2273



 Score = 44.7 bits (104), Expect = 0.083,   Method: Compositional matrix adjust.
 Identities = 55/203 (27%), Positives = 87/203 (42%), Gaps = 23/203 (11%)

Query: 43   LQFSKNEYSVSALENLPVNYVLLTVTTNKPRDL-----RVKYWLSNDYGERFSISR-QGD 96
            +QFS   Y    +ENL +   ++ V      +L     R   + S      F I    G 
Sbjct: 1309 VQFSNASYEAVIMENLALGTEIVRVQAYSIDNLNQITYRFDAYTSAQAKALFKIDAITGV 1368

Query: 97   ISLMQCLDYETEDSYRFTVYATDTLMTTSATVNI--SVVNVNDWDPRFRYPQYELFLPHI 154
            I++   +D E  D Y  TV A D      +TV +  +V++ ND  PRF +         +
Sbjct: 1369 ITVKGLVDREKGDFYTLTVVADDGGPKVDSTVKVYVTVLDENDNSPRFDFTSDSAI--SV 1426

Query: 155  PLADLTPGSVIGKVEAADGDKGD--RVTLSLR-----GPYEKMFSINDSGHISI---VDL 204
            P  D   G  +  V+A D D G   +V  SL      G +E + S +  G + +   +D 
Sbjct: 1427 P-EDCPVGQRVATVKARDPDAGSNGQVVFSLASGNIAGAFEIITSNDSIGEVFVAKPLDR 1485

Query: 205  SALNTSTIQLVVVATDTGNPPRQ 227
              L+   ++  +VA+D G PPR+
Sbjct: 1486 EELDHYILK--IVASDRGTPPRK 1506



 Score = 43.9 bits (102), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 40/137 (29%), Positives = 65/137 (47%), Gaps = 29/137 (21%)

Query: 65   LTVTTNKPRDLRVKYWLS---NDYG---------------ERFSIS-RQGDISLMQCLDY 105
            ++V+ + PR+ RV  WL+   ND G                +FS+  R   +  +  LD 
Sbjct: 1000 VSVSEDVPREFRV-VWLNCTDNDVGLNAELSYFITAGNVDGKFSVGYRDAVVRTVVGLDR 1058

Query: 106  ETEDSYRFTVYATDTL-----MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLT 160
            ET  +Y   + A D +      T +ATV ++V++VND  P F    YE  +P     D+ 
Sbjct: 1059 ETTAAYTLVLEAIDNVPVGKRRTGTATVFVTVLDVNDNRPIFLQSSYEASVPE----DIP 1114

Query: 161  PGSVIGKVEAADGDKGD 177
             G  I +++A D D+G+
Sbjct: 1115 EGHSIVQLKATDADEGE 1131



 Score = 43.9 bits (102), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 53/197 (26%), Positives = 88/197 (44%), Gaps = 24/197 (12%)

Query: 44  QFSKNEYSVSALENLPVNYVL----LTVTTNKPRDLRVKYWLSNDYGERF-----SISRQ 94
           +F+ +EYSV+  E   V + L      V  ++  +   + +L  +    F     S+  +
Sbjct: 347 EFNSSEYSVAITELAQVGFALPLFIQVVDKDEGLNSMFEVYLVGNNSHHFIISPTSVQGK 406

Query: 95  GDISLMQC--LDYETEDSYRFTVYATDTL--MTTSATVNISVVNVNDWDPRFRYPQYELF 150
            DI +     LDYET D Y F ++A +++      A V I+++N ND  P F  P Y + 
Sbjct: 407 ADIRIRVAIPLDYETVDRYDFDLFANESVPDHVGYAKVKITLINENDNRPIFSQPLYNVS 466

Query: 151 LPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDSGHISIVDLSALN 208
           L      ++T G+ +  V A D D G    V        ++     D+G I ++  + L+
Sbjct: 467 L----YENITVGTSVLTVLATDNDVGTFGEVNYFFSDDPDRFSLDKDTGLIMLI--ARLD 520

Query: 209 TSTIQ---LVVVATDTG 222
              IQ   L V+A D G
Sbjct: 521 YELIQRFTLTVIARDGG 537



 Score = 39.7 bits (91), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 59/203 (29%), Positives = 88/203 (43%), Gaps = 22/203 (10%)

Query: 31  LIVSKAGTSLRELQFSKNEYSVSAL---ENLPVNYVLLTVTTNKPRDLR---VKYWLSND 84
           ++VS +   +  L F  N +  + L   E+ PV     +VT    RD+    + + +S +
Sbjct: 16  MLVSGSWGQVNRLPFFTNHFFDTYLLISEDTPVGS---SVTQLLARDMDNDPLVFGVSGE 72

Query: 85  YGERFSISR--QGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRF 142
              RF       G + L Q LD ET+  +      +D     +  VNI V +VND  P F
Sbjct: 73  EASRFFAVEPDTGVVWLRQPLDRETKSEFTVEFSVSDHQGVITRKVNIQVGDVNDNAPTF 132

Query: 143 RYPQYELFLPHIPLADLTP-GSVIGKVEAADGD--KGDRVTLSLRGPYEKMFSINDSGHI 199
               Y + +P     + TP G+ I  V A D D   G  V  S + P  + F+I+ +  I
Sbjct: 133 HNQPYSVRIP-----ENTPVGTPIFIVNATDPDLGAGGSVLYSFQPP-SQFFAIDSARGI 186

Query: 200 SIV--DLSALNTSTIQLVVVATD 220
             V  +L    T   QL V ATD
Sbjct: 187 VTVIRELDYEVTQAYQLTVNATD 209


>gi|348570608|ref|XP_003471089.1| PREDICTED: protocadherin-11 X-linked-like [Cavia porcellus]
          Length = 1102

 Score = 60.8 bits (146), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 76/268 (28%), Positives = 120/268 (44%), Gaps = 42/268 (15%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKP---RDLRVKYWLSNDYGERFSISRQ-GDISLM 100
           F+ NEY+    ENLP +  +  +T   P    +  V   +S D  + F+I  Q G I   
Sbjct: 570 FTHNEYNFYVPENLPRHGTVGLITVTDPDYGENSAVTLSIS-DMSDEFTIDPQTGVIRPN 628

Query: 101 QCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQ----YELFLPH 153
              D E ++SY F V A D      +++A + I+VV+VND  P F  P     YEL LP 
Sbjct: 629 ISFDREKQESYTFYVKAEDGGRVSHSSTAKITINVVDVNDNKPGFVVPSSNHSYELVLPS 688

Query: 154 IPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIND-SGHISIVDLSAL-N 208
                  PG+VI KV A D D G    L    + G  + +F I+  +G+I++ +   + +
Sbjct: 689 T-----NPGTVIFKVVATDNDTGLNSELRYSIVGGNTKGLFVIDQKTGNITLKEKCVIAD 743

Query: 209 TSTIQLVVVATDTGNPPRQASVPAIMHFP------------------EAIVQQASSKLNS 250
               +LVV   D G P    S+  +  F                   E  V +   K + 
Sbjct: 744 LGLHRLVVKVKDLGQPNSLFSIVVVNLFVNESVSNLTLIHELVHKGIETSVTENIEKADL 803

Query: 251 GTSSTVLIILGVVLIVLGFVIILLILYI 278
            + S  + I+  + IV G +I++L+++I
Sbjct: 804 PSPSDYVKIM--IAIVAGAIIVILVIFI 829



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 37/118 (31%), Positives = 62/118 (52%), Gaps = 12/118 (10%)

Query: 73  RDLRVKYWLSNDYGERFSIS-RQGDISLMQCLDYETEDSYRFTVYATD----TLMTTSAT 127
           ++  + Y L  D    F++  R G ++ +  LD E ++ Y FTV A D    +LMT +AT
Sbjct: 497 QNAEISYLLGVDAPSEFNLDPRTGVLTAVNKLDREKQEKYYFTVLAKDNGIPSLMT-NAT 555

Query: 128 VNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDR--VTLSL 183
           V ++V++ ND  P F + +Y  ++P     +L     +G +   D D G+   VTLS+
Sbjct: 556 VFVTVLDQNDNSPVFTHNEYNFYVPE----NLPRHGTVGLITVTDPDYGENSAVTLSI 609



 Score = 40.8 bits (94), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 38/140 (27%), Positives = 71/140 (50%), Gaps = 17/140 (12%)

Query: 103 LDYETEDSYRFTVYATDTLM---TTSATVNISVVNVNDWDPRFRYPQYELFLP-HIPLAD 158
           LD E +D+Y   V   D      +++A + +SV + ND  P FR  + E+ +P + P+  
Sbjct: 207 LDREEKDTYVMKVKVEDGGFPQRSSTAILQVSVSDTNDNHPVFREQEIEVSIPENAPI-- 264

Query: 159 LTPGSVIGKVEAADGDKGDRVTLS------LRGPYEKMFSIN-DSGHISIVD-LSALNTS 210
              G+ + ++ A D D G+   +       +    +K+F +N  +G I+I + L      
Sbjct: 265 ---GTSVTQLHATDADIGENARIHFYFSNLISNIAKKLFHLNTTTGLITIKELLDREEAP 321

Query: 211 TIQLVVVATDTGNPPRQASV 230
           + +L+V+A+D G+ P +A V
Sbjct: 322 SHKLLVLASDGGSVPARAIV 341


>gi|345323234|ref|XP_003430691.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 1-like
           [Ornithorhynchus anatinus]
          Length = 859

 Score = 60.8 bits (146), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 63/220 (28%), Positives = 97/220 (44%), Gaps = 28/220 (12%)

Query: 25  RYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWL 81
           R A+  L V+   T+     F + EY  +  ENL + Y +LTV     + P +  ++Y L
Sbjct: 124 RSAVTYLTVTVGDTNDHRPVFEQAEYRETVRENLELGYEVLTVRASDGDAPANADLRYRL 183

Query: 82  SNDYGERFSIS-RQGDISLMQCLDYETEDSYRFTVYATDT-----LMTTSATVNISVVNV 135
               G  F I  R G +     +D E    +R  V A D       ++ +ATV I+V + 
Sbjct: 184 LEGAGGAFEIDPRTGVVRTRAAVDREEAAEHRLLVEADDRGRDPGPLSATATVRIAVEDE 243

Query: 136 NDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSIND 195
           ND  P+F   +Y + +P     D+ P + + +V A D D+G    L L G    + S N 
Sbjct: 244 NDNYPQFSEGRYVVRVPE----DVAPDTAVLRVRATDRDRGRNAAL-LYG----IVSGNP 294

Query: 196 SGHISIVDLSA-------LNTSTIQ---LVVVATDTGNPP 225
            G   +  L+        L+  T++   L V A D G PP
Sbjct: 295 DGRFHLHALTGALDVIHPLDYETVREYTLRVKAQDGGRPP 334



 Score = 51.6 bits (122), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 47/152 (30%), Positives = 69/152 (45%), Gaps = 16/152 (10%)

Query: 45  FSKNEYSVSALENLPVNYVLL---TVTTNKPRDLRVKYWLSNDYGERFSISRQ-----GD 96
           F  + +  S LEN P  + +L    V  +   + R+ Y L  D G   +         G 
Sbjct: 356 FVSSPFQASVLENAPPGHSVLHVQAVDADSGENARLSYRLV-DTGSPPAAPAAIHEGTGW 414

Query: 97  ISLMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
           I++   LD E  + Y F V A D     ++ SA+V+++V++VND DP F  P YEL L  
Sbjct: 415 ITVRAELDREARERYSFGVEAVDHGAPALSASASVSVTVLDVNDNDPAFTQPAYELRLNE 474

Query: 154 IPLADLTPGSVIGKVEAADGDKGDRVTLSLRG 185
               D   GS +  + A D D    +T  L G
Sbjct: 475 ----DAAVGSSVLTLRARDRDANSVITYQLTG 502



 Score = 41.2 bits (95), Expect = 0.81,   Method: Compositional matrix adjust.
 Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 5/94 (5%)

Query: 95  GDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPH- 153
           GD+  +  LD+E    Y   V AT   + + ATV + +++ ND  P    P +++   + 
Sbjct: 600 GDLRALAELDFERRREYVLVVQATSAPLVSRATVRVRLLDRNDNPPVL--PDFQILFNNY 657

Query: 154 -IPLADLTPGSVIGKVEAADGDKGDRVTLS-LRG 185
               ++  P  VIG+V A D D  DR+  + LRG
Sbjct: 658 VTNKSNSFPSGVIGRVPARDPDVSDRLDYAFLRG 691


>gi|410956059|ref|XP_003984662.1| PREDICTED: protocadherin Fat 1 [Felis catus]
          Length = 4586

 Score = 60.8 bits (146), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 46/198 (23%), Positives = 90/198 (45%), Gaps = 24/198 (12%)

Query: 7    FLQPITLVVRAIQYDNQDRYALATL-------------------IVSKAGTSLRELQFSK 47
            F++P T VV + ++     Y + ++                    +SK   SL  + F +
Sbjct: 1299 FIEPKTGVVSSKKFSGAGEYDILSIKAVDNGRPQKSSTTRLHIEWISKPKPSLEPISFEE 1358

Query: 48   NEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGERFSISR-QGDISLMQCLDYE 106
              ++ + +E+ PV +++  ++   P        +  +Y   F + +  G I + + LD E
Sbjct: 1359 PFFTFTVMESDPVAHMIGVISVEPPGTPLWFDIIGGNYDSHFDVDKGTGTIVVAKPLDAE 1418

Query: 107  TEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIG 166
             + +Y  TV ATD   T    V I V++ ND  P+F   +YE+ +P     D  P + I 
Sbjct: 1419 QKSNYNLTVEATDGTTTILTQVFIKVIDTNDHRPQFSTSKYEVVIPE----DTVPETEIL 1474

Query: 167  KVEAADGDKGDRVTLSLR 184
            ++ A D D+ +++  +L+
Sbjct: 1475 QISAVDKDEKNKLIYTLQ 1492



 Score = 58.5 bits (140), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 44/145 (30%), Positives = 70/145 (48%), Gaps = 8/145 (5%)

Query: 90   SISRQGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYEL 149
            +I  +  + + + LD E  D+Y  T+ ATD   ++ A V + V++ ND  P      Y  
Sbjct: 2969 NIQNEWKVFVKKPLDREKRDNYLLTITATDGTFSSKAIVEVKVLDANDNSPVCEKSLYSE 3028

Query: 150  FLPHIPLADLTPGSVIGKVEAADGD--KGDRVTLSLRGPYEKMFSIN-DSGHI-SIVDLS 205
             +P     D  PG +I +V A D D      +T +L GP  + F +N D+G + ++  L 
Sbjct: 3029 TIPE----DAFPGKLIMQVSATDADIRSNAEITYTLFGPGAEKFKLNPDTGELKTLAPLD 3084

Query: 206  ALNTSTIQLVVVATDTGNPPRQASV 230
                +   L+V ATD G    QAS+
Sbjct: 3085 REEQAVYNLLVKATDGGGRFCQASI 3109



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 62/218 (28%), Positives = 105/218 (48%), Gaps = 20/218 (9%)

Query: 29   ATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTV-TTNKPRDL--RVKYWLSNDY 85
            A + V+  G +L    F ++EY V   EN P++ +++ V  T+    +   + Y + ND+
Sbjct: 2474 AQVHVTVIGGNLHSPVFLQSEYEVELAENAPLHTLVIEVKATDGDSGIYGHITYHIVNDF 2533

Query: 86   G-ERFSISRQGDISLMQCLDYET--EDSYRFTVYATDTLMTTS-ATVNISVVNVNDWDPR 141
              +RF  + +G I  ++ LD ET  E      + A D     +  T+N+ + + ND  P+
Sbjct: 2534 AKDRFYTNDRGQIFTLEKLDRETPAEKVISVRLMAKDAGGKVAFCTINVILTDDNDNAPQ 2593

Query: 142  FRYPQYELFLPHIPLADLTP-GSVIGKVEAADGDKGDR--VTLSLRGPYEKM---FSIND 195
            FR  +YE     + +    P G+ + KV A+D D+G    VT ++    E +     IN 
Sbjct: 2594 FRATKYE-----VDIGSSAPKGTSVIKVLASDADEGSNADVTYAIEADSESVKENLEINK 2648

Query: 196  -SGHISIVD-LSALNTSTIQLVVVATDTGNPPRQASVP 231
             SG I+  + L  L        V A D+G+P R++ VP
Sbjct: 2649 LSGIITTKESLIGLENEFFTFFVRAVDSGSPSRESVVP 2686



 Score = 54.7 bits (130), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 66/231 (28%), Positives = 110/231 (47%), Gaps = 22/231 (9%)

Query: 12   TLVVRAIQYDNQDRY-ALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTN 70
            TL ++A+      R  A  T++VS    +     F   EY  +  E++ +   +L V   
Sbjct: 3194 TLTLKAVDQGLPRRLTATGTVVVSVLDINDNPPVFEYREYGATVSEDILLGTEVLQVYAA 3253

Query: 71   KPRDLRVKYWLS------NDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDT--- 120
              RD+     ++      N++G +FSI S+ G I +++ LDYE+   Y  TV ATD    
Sbjct: 3254 S-RDIEANAEITYAIISGNEHG-KFSIDSKTGAIFIIENLDYESSHEYYLTVEATDGGTP 3311

Query: 121  LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVT 180
             ++  ATV+I+V +VND  P F    Y   +    + + +  +V+   + ADG     + 
Sbjct: 3312 SLSDVATVSINVTDVNDNSPVFSQDTYTAVISEDAVLEQSVITVMA--DDADGPSNSHIR 3369

Query: 181  LSLR-GPYEKMFSINDS-GHISIVDLSALNTSTIQ---LVVVATDTGNPPR 226
             S+  G     F+I+ + G + +  L  L+  TI    L V A+D G+PPR
Sbjct: 3370 YSITDGNQGSPFTIDPARGEVKVTRL--LDRETISGYTLTVQASDNGSPPR 3418



 Score = 54.7 bits (130), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 57/196 (29%), Positives = 95/196 (48%), Gaps = 23/196 (11%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSN-DYGERFSIS-RQGDISLMQC 102
            F K  YS    EN+ ++  ++ V  N P  L+V Y +++ D   +F+++   G I+++  
Sbjct: 2180 FEKPFYSAEVPENIQMHSPVVHVQANSPEGLKVFYSITDGDPFSQFTVNFNTGVINVIAP 2239

Query: 103  LDYETEDSYRFTVYATDTLMTTSATVNISVV--NVNDWDPRFRYPQYELFLPHIPLADLT 160
            LD+E+  +Y+ +V ATD+L    A V + ++  ++ND  P F    Y         A L+
Sbjct: 2240 LDFESHPAYKLSVRATDSLTGAHAEVFVDIIVEDINDNPPVFGQQSY--------AATLS 2291

Query: 161  PGSVIG----KVEAADGDK--GDRVTLSLRGPYEK---MFSINDS-GHISIVD-LSALNT 209
              +VIG    +V A D D      ++  + G + K    F I+ S G IS+V  L     
Sbjct: 2292 EAAVIGTSVVQVRATDSDSEPNRGISYHMFGNHSKSHDHFHIDSSTGLISLVRTLDYEQF 2351

Query: 210  STIQLVVVATDTGNPP 225
               ++ V A D G PP
Sbjct: 2352 QQHKIFVRALDGGMPP 2367



 Score = 51.2 bits (121), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 58/244 (23%), Positives = 104/244 (42%), Gaps = 40/244 (16%)

Query: 4    EDDFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYV 63
            E++F    T  VRA+   +  R ++  + V      ++  +FS+  Y+ +  E++P+   
Sbjct: 2663 ENEFF---TFFVRAVDSGSPSRESVVPVYVKILPPEIQLPKFSEPFYTYTVSEDMPIGTE 2719

Query: 64   LLTVTTNKPRDLRVKYWLSN----DYGERFSISRQ-GDISLMQCLDYETEDSYRFTVYA- 117
            +  +       +       N    +  E F I RQ G + L + LD+ET   Y+F++ A 
Sbjct: 2720 IDLIRAEHSGTVLYSLIKGNTPESNRDEFFVIDRQSGRLKLEKSLDHETTKWYQFSILAR 2779

Query: 118  ---TDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGD 174
                D  +  S  V+I V + ND  P      YE F+    + +L  GS + +  A+D D
Sbjct: 2780 CAHEDYEVVASVDVSIQVKDANDNSPVLESNPYEAFI----VENLPGGSRVIQARASDLD 2835

Query: 175  KGDRVTLSLRGPYEKMFSINDSGHISIVDLSALNTST----------------IQLVVVA 218
             G    +        M+S++ S  + +++  A+N  T                 Q+ VVA
Sbjct: 2836 SGTNGQV--------MYSLDQSQSVEVIESFAINMETGWITTLKELDHEERDHYQIKVVA 2887

Query: 219  TDTG 222
            +D G
Sbjct: 2888 SDHG 2891



 Score = 45.4 bits (106), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 58/215 (26%), Positives = 91/215 (42%), Gaps = 19/215 (8%)

Query: 24  DRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLR---VKYW 80
           DR A   ++V   G +    +F++  Y  S  EN+P+   +L+V+   P +     V Y 
Sbjct: 440 DRRASTRVLVKVLGANSNPPEFTQTAYKASFDENVPIGTTVLSVSAVDPDEGENGYVTYS 499

Query: 81  LSNDYGERFSISR-QGDISLMQCLDYE-TEDSYRFTVYATDTLMTTSATVN----ISVVN 134
           ++N     F I+   G +S  + LDYE     Y   + A+D  +     V     +++ N
Sbjct: 500 IANLNHVPFVINHFTGAVSTSENLDYELMPRVYTLRIRASDWGLPYRREVEVLATVTLNN 559

Query: 135 VNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYE-KMFSI 193
           +ND  P F     E  +P     DL  G  I  V A D D+   V   +    E  +FS+
Sbjct: 560 LNDNTPLFEKINCEGTIPR----DLGVGEQITTVSAIDADELQLVRYQIEAGNELDLFSL 615

Query: 194 NDSGHI-----SIVDLSALNTSTIQLVVVATDTGN 223
           N S  +     S++D      S   L + ATD  N
Sbjct: 616 NPSSGVLSLKQSLLDGLGTKVSFHSLRITATDGEN 650



 Score = 43.9 bits (102), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 55/195 (28%), Positives = 87/195 (44%), Gaps = 20/195 (10%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTTNKPRDL----RVKYWLSNDYGERFSI-SRQGDIS 98
            +F +  Y V   E+  V+  ++ V     +DL     V Y +  D  ++FSI S  G + 
Sbjct: 819  EFLQESYFVEVSEDKEVDSEIIQVEATD-KDLGPNGHVTYSILTD-TDKFSIDSVTGVVK 876

Query: 99   LMQCLDYETEDSYRFTVYATDTL-----MTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
            ++  LD E +  +   + A D       + ++  + +S+ +VND  PRF  P Y + +  
Sbjct: 877  IVSPLDREVQHVHYLKIEARDQAREEPQLLSTVLLKVSLEDVNDNPPRFIPPNYRVKV-- 934

Query: 154  IPLADLTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSIND-SGHISIVD-LSALNT 209
                DL  G++I  +EA D D G   +V  SL    E  F ++  SG + IV  L     
Sbjct: 935  --REDLPEGTIIMWLEAHDPDLGQSSQVRYSLLDHGEGHFDVDKLSGAVRIVQHLDFEKK 992

Query: 210  STIQLVVVATDTGNP 224
                L V A D G P
Sbjct: 993  QVYNLTVRAKDKGKP 1007



 Score = 43.5 bits (101), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 53/191 (27%), Positives = 86/191 (45%), Gaps = 30/191 (15%)

Query: 56   ENLPVNYVLLTVTTNKP---RDLRVKYWLSNDYG-ERFSISRQ-GDISLMQCLDYETEDS 110
            E++P+   ++TV+ +     RD  ++Y + +  G   F I  + G I     LD E+   
Sbjct: 1043 EDVPIGSSVMTVSAHDEDTGRDGEIRYSIRDGSGVGVFKIDEETGVIETSDGLDRESTSH 1102

Query: 111  YRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSV-IG 166
            Y  TVYA D     +++   + I V +VND  P+   P   ++ P I   + +P  V + 
Sbjct: 1103 YWLTVYAADRGVVPLSSFIEIYIEVEDVNDNAPQTSEP---VYYPEI--IENSPKDVSVV 1157

Query: 167  KVEAADGDKGDRVTLSLRGPYEKMFSINDSGHISIVDLSALNTSTIQ-----------LV 215
            ++EA D D      L+      K+ S N  G  SI   + L T+T +           L 
Sbjct: 1158 QIEAFDADSSSNDKLTY-----KITSGNPQGFFSIHPKTGLITTTSRKLDREQQDEHILE 1212

Query: 216  VVATDTGNPPR 226
            V  TD G+PP+
Sbjct: 1213 VTVTDNGSPPK 1223



 Score = 41.6 bits (96), Expect = 0.69,   Method: Compositional matrix adjust.
 Identities = 40/157 (25%), Positives = 72/157 (45%), Gaps = 10/157 (6%)

Query: 76   RVKYWLSNDYGERFSIS-RQGDISLMQCLDYETEDSYRFTVYATDTL-MTTSATVNISVV 133
             + Y L     E+F ++   G++  +  LD E +  Y   V ATD       A++ +++ 
Sbjct: 3055 EITYTLFGPGAEKFKLNPDTGELKTLAPLDREEQAVYNLLVKATDGGGRFCQASIVLTLE 3114

Query: 134  NVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMF 191
            +VND  P F    + + +      +  PG+++ +V+A D D G   +++ SL    +  F
Sbjct: 3115 DVNDNAPEFSADPHAITV----FENTEPGTLLTRVQATDADAGLNRKISYSLVNSADGQF 3170

Query: 192  SINDSGHISIVD--LSALNTSTIQLVVVATDTGNPPR 226
            SIN+   I  ++  L     +   L + A D G P R
Sbjct: 3171 SINEFSGILQLEKPLDREVRAVYTLTLKAVDQGLPRR 3207



 Score = 40.4 bits (93), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 43/162 (26%), Positives = 72/162 (44%), Gaps = 14/162 (8%)

Query: 45   FSKNEYSVSALENLPVNY-VLLTVTTNKPRDLRVKYWL-----SNDYGERFSISRQGDIS 98
            FSK  YSV   EN PV + VL  V T++        +       ND G  F +++QG + 
Sbjct: 3438 FSKGNYSVIIQENKPVGFSVLQLVVTDRDSSHNGPPFFFTVVSGNDDG-VFEVNQQGVLL 3496

Query: 99   LMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIP 155
                +  + +D Y   V   D     +++   ++I V+  + + P       E+F+    
Sbjct: 3497 TSAAIKRKVKDHYLLHVKVADNGKPQLSSLTYIDIRVIEESVYPPAIL--PLEIFI--TA 3552

Query: 156  LADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSG 197
              +   G VIGK+ A D D  D ++ SL      +FS++ +G
Sbjct: 3553 FGEEYSGGVIGKIHATDQDVYDTLSYSLDPQMGNLFSVSSTG 3594


>gi|363738855|ref|XP_003642081.1| PREDICTED: protocadherin beta-4-like [Gallus gallus]
          Length = 1044

 Score = 60.8 bits (146), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 50/199 (25%), Positives = 89/199 (44%), Gaps = 27/199 (13%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRDL---RVKYWLSNDYGERFSI----SRQGDI 97
           F++  Y    LEN P   V+L V  N   +     + Y  S   G R S+    S+ G+I
Sbjct: 469 FTQKVYIGHVLENAPEGSVVLRVVANDADEGVNGDISYQFSQSVGHRHSLFTINSKTGEI 528

Query: 98  SLMQCLDYETEDSYRFTVYATD-TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
            + + LD+ETE  +  TV A D   +++   V + V++VND  P      +   +P    
Sbjct: 529 GIAKPLDFETEKKHELTVQAIDGGGLSSMCNVIVEVLDVNDNAPEIVVSSFSSPIPE--- 585

Query: 157 ADLTPGSVIGKVEAADGDKG----------DRVTLSLRGPYEKMFSINDSGHISIVDLSA 206
            ++ PG+V+      D D G          ++++ +LR  ++  + +     +++  L  
Sbjct: 586 -NVEPGTVVALFAVRDQDSGVNGEITCALEEQLSFALRPAFKNYYEL-----VTVSTLDR 639

Query: 207 LNTSTIQLVVVATDTGNPP 225
              +   +VV A D G+PP
Sbjct: 640 EERAQHMVVVTAADAGSPP 658



 Score = 38.9 bits (89), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 35/133 (26%), Positives = 60/133 (45%), Gaps = 17/133 (12%)

Query: 103 LDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADL 159
           LD E    +   V A D     +T++ T ++ + +VND  P F    Y +++      + 
Sbjct: 637 LDREERAQHMVVVTAADAGSPPLTSTHTFSVDISDVNDNAPVFNQTSYTMYVHE----NN 692

Query: 160 TPGSVIGKVEAADGDKGDRVTLS-----LRGPYEKMFSI----NDSGHISIVD-LSALNT 209
            P  ++G V+A D D G    +S      RGP E+  S     ++SG + ++  L     
Sbjct: 693 APALLVGAVKATDADAGPNAKVSYSVVPARGPEEEPCSCVSVNSESGGVFVLRPLDYEQL 752

Query: 210 STIQLVVVATDTG 222
             +++VV A D G
Sbjct: 753 RQLEVVVSAADAG 765



 Score = 38.9 bits (89), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 43/152 (28%), Positives = 70/152 (46%), Gaps = 15/152 (9%)

Query: 92  SRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYE 148
           S  G + +++ LDYE        V A D     +++S +V + VV+ ND  P   +P  +
Sbjct: 736 SESGGVFVLRPLDYEQLRQLEVVVSAADAGSPPLSSSVSVRLLVVDENDNAPLVLHPSAQ 795

Query: 149 LFLPHIPLADLTP-----GSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-DSGHI 199
              P  P ++L P     G ++ KV A D D G    LS   LR     +F++   SG +
Sbjct: 796 DSSP--PSSELVPAGAEAGDLVSKVVAVDADSGQNSWLSYQLLRATEPGLFAVGAQSGEV 853

Query: 200 SIVDL-SALNTSTIQLVVVATDTGNPPRQASV 230
            +    +  + +  +LVV+  D G PP  A+ 
Sbjct: 854 RLRRPPTERDAAKQKLVVLVRDNGRPPLSATA 885


>gi|291407994|ref|XP_002720202.1| PREDICTED: protocadherin 11 X-linked isoform 3 [Oryctolagus
           cuniculus]
          Length = 1340

 Score = 60.8 bits (146), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 81/280 (28%), Positives = 118/280 (42%), Gaps = 65/280 (23%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGE-------------RFSI 91
           F+ NEY+    ENLP +  +  +T   P           DYGE              F+I
Sbjct: 570 FTHNEYNFYVPENLPRHGTVGLITVTDP-----------DYGENSAVTLSIVDVNDEFTI 618

Query: 92  SRQ-GDISLMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYP-- 145
             Q G I      D E ++SY F V A D      +++A V I+VV+VND  P F  P  
Sbjct: 619 DPQTGVIRPNISFDREKQESYTFYVKAEDGGRVSRSSTAKVTINVVDVNDNKPVFVIPPS 678

Query: 146 --QYELFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIND--SGHI 199
              YEL LP        PG+V+ +V A D D G    +  S+ G   K   I D  SG+I
Sbjct: 679 NYSYELVLP-----STNPGAVVFQVVAVDNDTGMNAEIRYSIAGGNAKGLFIIDQTSGNI 733

Query: 200 SIVDLSAL-NTSTIQLVVVATDTGNPPRQASVPAIMHFPEAIVQQA-------------- 244
           ++ +   + +    +LVV A D G P    +V  +  F    V  A              
Sbjct: 734 TLKEKCVVADLGLHRLVVKAKDLGQPDSLFNVIVVNLFVNESVTNATLINELVHKSIETP 793

Query: 245 ------SSKLNSGTSSTVLIILGVVLIVLGFVIILLILYI 278
                 ++  +S TS  V I+   V IV G + ++L+++I
Sbjct: 794 VTQNVETADASSPTSDYVKIM---VAIVAGTITVILVIFI 830



 Score = 52.4 bits (124), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 36/117 (30%), Positives = 61/117 (52%), Gaps = 10/117 (8%)

Query: 73  RDLRVKYWLSNDYGERFSIS-RQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATV 128
           R+  + Y L  D    F++  R G ++ ++ LD E ++ Y FTV A D     + T+ATV
Sbjct: 497 RNAEINYLLGTDAPPEFNLDHRTGILTAVKKLDREKQEKYYFTVLAKDNGIPPLITNATV 556

Query: 129 NISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDR--VTLSL 183
            ++V++ ND  P F + +Y  ++P     +L     +G +   D D G+   VTLS+
Sbjct: 557 LVTVLDQNDNSPIFTHNEYNFYVPE----NLPRHGTVGLITVTDPDYGENSAVTLSI 609


>gi|432098834|gb|ELK28329.1| Protocadherin Fat 2 [Myotis davidii]
          Length = 4335

 Score = 60.8 bits (146), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 56/206 (27%), Positives = 95/206 (46%), Gaps = 21/206 (10%)

Query: 43   LQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGER---FSISRQ-GDIS 98
            L F +  YS + +E  PVN+++  ++      L   +W +   G++   F I +  G I 
Sbjct: 1346 LAFDEPHYSFTVMETDPVNHMVGVISVEGRPGL---FWFNISGGDKDMDFDIEKTTGSII 1402

Query: 99   LMQCLDYETEDSYRFTVYATDTLMTTSATVNISVV-NVNDWDPRFRYPQYELFLPHIPLA 157
            + + LD     SY  TV  TD   T +  V I ++ N+N   P+F    YE+ +P     
Sbjct: 1403 IAKPLDTRKRSSYNLTVEVTDGFHTIATQVYIVMIANINHHRPQFLEAHYEVRVPQ---- 1458

Query: 158  DLTPGSVIGKVEAADGDKGDRVTLSLRGPYE----KMFSINDSGHISI----VDLSALNT 209
            D  PG  + +V+A D DKG  +  ++ G  +     +F ++ S  + +    +DLS+   
Sbjct: 1459 DTLPGVELLRVQATDQDKGKGLIYTIHGSQDPESASLFQLDPSSGVLVTVGKLDLSS-GP 1517

Query: 210  STIQLVVVATDTGNPPRQASVPAIMH 235
            S   L V+  D   P R+  V   +H
Sbjct: 1518 SQHMLTVMVRDQEMPIRRNFVWVSIH 1543



 Score = 51.6 bits (122), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 50/143 (34%), Positives = 77/143 (53%), Gaps = 11/143 (7%)

Query: 95   GDISLMQCLDYETEDSYRFTVYATD----TLMTTSATVNISVVNVNDWDPRFRYPQYELF 150
            G +S  + LD ET+D +   V   D    +L +TS  V + + +VND  P F +  + + 
Sbjct: 1191 GLLSTARQLDRETKDEHILEVTVLDNGEPSLRSTSRVV-VCISDVNDNAPVFSHKLFNVR 1249

Query: 151  LPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIND-SGHISIVDLSAL 207
            LP   L+ +TPG V  ++ A+D D+G   RVT S+    ++ FSI+  +G +S  +  A 
Sbjct: 1250 LPER-LSPVTPGPVY-RLVASDLDEGLNGRVTYSIEESDKEGFSIHPVTGMVSSSNTFAA 1307

Query: 208  NTSTIQLVVVATDTGNPPRQASV 230
                I L + ATD+G PP  ASV
Sbjct: 1308 GEYNI-LTIQATDSGQPPLSASV 1329



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 47/160 (29%), Positives = 73/160 (45%), Gaps = 17/160 (10%)

Query: 45   FSKNEYSVSALENLPVN---YVLLTVTTNKPRDLRVKYWL---SNDYGERFSIS-RQGDI 97
            FS+  Y+ S  E LP       LL    +  ++  V Y +    +D  + F I+   G++
Sbjct: 2271 FSQLVYTTSISEGLPAQTPVIQLLASDQDSGQNRDVSYQIVEDGSDVSKFFQINGSTGEM 2330

Query: 98   SLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHI 154
            S +Q LDYE++  +   V A D     +T    V + V ++ND  P FR PQYE  +  +
Sbjct: 2331 STVQELDYESQQHFHVKVRAMDRGNPPLTGETLVVVGVSDINDNPPEFRQPQYEATVSEL 2390

Query: 155  PLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMF 191
             +     G +  KV+A D D  D   L    L G  ++ F
Sbjct: 2391 AIC----GHLALKVQALDPDSRDTSRLEYLILSGNQDRQF 2426



 Score = 48.5 bits (114), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 58/192 (30%), Positives = 86/192 (44%), Gaps = 15/192 (7%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYG-ERFSIS-RQGDISLMQC 102
            F    Y V   EN+ +   +L      P  LR+ Y +  +     F+I  + G +++   
Sbjct: 2170 FQSPYYKVRVPENITLYTPILHTQARSPEGLRLIYNIVEEEPLMLFTIDFKTGVLTVTGP 2229

Query: 103  LDYETEDSYRFTVYATDTLMT--TSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLT 160
            LDYE++  + FTV ATDT     + ATV + V +VND  P F    Y   +    L   T
Sbjct: 2230 LDYESKTKHVFTVRATDTAQGSFSEATVEVLVEDVNDNPPTFSQLVYTTSISE-GLPAQT 2288

Query: 161  PGSVIGKVEAADGDKGDRVTLSLR-----GPYEKMFSINDS-GHISIV-DLSALNTSTIQ 213
            P   + ++ A+D D G    +S +         K F IN S G +S V +L   +     
Sbjct: 2289 P---VIQLLASDQDSGQNRDVSYQIVEDGSDVSKFFQINGSTGEMSTVQELDYESQQHFH 2345

Query: 214  LVVVATDTGNPP 225
            + V A D GNPP
Sbjct: 2346 VKVRAMDRGNPP 2357



 Score = 47.8 bits (112), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 43/156 (27%), Positives = 73/156 (46%), Gaps = 25/156 (16%)

Query: 11   ITLVVRAIQYDNQDRYALATLIVSKAGTSLREL---------------QFSKNEYSVSAL 55
            I  V +++ ++   +Y L+     K  +SL ++               +F ++ YS   L
Sbjct: 3273 ILYVNKSLDFETNPKYFLSIECSRKGSSSLGDMTTIVVNITDINEHRPRFPQDLYSTRVL 3332

Query: 56   ENLPVNYVLLTVTT---NKPRDLRVKYWL--SNDYGERFSIS-RQGDISLMQCLDYETED 109
            EN  V   +LTV+    + P +  + Y L   N  G  F+I  ++G++ + + LD+E   
Sbjct: 3333 ENAIVGDTVLTVSATDEDGPLNSAITYSLVGGNQLG-HFAIDPKKGELQVAKALDWEQTS 3391

Query: 110  SYRFTVYATDT---LMTTSATVNISVVNVNDWDPRF 142
            SY   + ATD+    +     V I VV+VND  PRF
Sbjct: 3392 SYSLRLRATDSGRPPLHEDTDVAIQVVDVNDNPPRF 3427



 Score = 47.4 bits (111), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 52/197 (26%), Positives = 91/197 (46%), Gaps = 22/197 (11%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGER-----FSISRQ-GDI 97
            +FS+  Y+ SA E+LP    + +V     +D  +   +     E      FS+ +  G +
Sbjct: 2690 KFSEPLYTFSASEDLPEGSEIGSVKAVAAQDPVIYSLVQGTTPESNRDGVFSLDQNTGAL 2749

Query: 98   SLMQCLDYETEDSYRFTVYA----TDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
             + + +DYE+   Y+  + A     DT + +  +VNI V +VND  P F    Y+  L  
Sbjct: 2750 KVRKAMDYESTKWYQIDLMAHCPYNDTNLISLVSVNIQVKDVNDNRPIFEADPYKAIL-- 2807

Query: 154  IPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYE------KMFSIN-DSGHISIV-DLS 205
                ++  G+ + +V A D D G    +S R P +      ++F+I+ ++G I+ + +L 
Sbjct: 2808 --TENMPVGTAVIQVTANDQDTGKDGQVSYRLPMDPDSNIHELFAIDSETGWITTLQELD 2865

Query: 206  ALNTSTIQLVVVATDTG 222
                 T    VVA D G
Sbjct: 2866 CETRQTYHFYVVAYDHG 2882



 Score = 45.8 bits (107), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 55/201 (27%), Positives = 85/201 (42%), Gaps = 20/201 (9%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTT------NKPRDLRVKYWLSNDYGERFSISRQGD- 96
            +F+  +Y  S +EN      + T+ T       + R +   Y    D   +F IS+ GD 
Sbjct: 2906 KFASEDYRGSVIENSEPGEPVATLKTFDADISEQNRQVTC-YITEGDPLGQFGISQVGDE 2964

Query: 97   --ISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHI 154
              I   + LD E    Y   + A+D     S  V I V+++ND  P+      +L     
Sbjct: 2965 WSIFSRKTLDREHIAKYLLRITASDGKFQASVIVEIFVLDINDNSPQCS----QLLYTGK 3020

Query: 155  PLADLTPGSVIGKVEAA--DGDKGDRVTLSLRGPYEKMFSINDSGHISIVDLSALN---T 209
               D++PG  I +V A   D D   ++T +L GP    F ++    + +  L+AL+    
Sbjct: 3021 VSEDISPGHFILQVSATDLDSDTNAQITYTLHGPGADEFKLDPHTGV-LTTLTALDRERK 3079

Query: 210  STIQLVVVATDTGNPPRQASV 230
                LV  ATD G    QA V
Sbjct: 3080 DVYSLVAKATDGGGQSCQADV 3100



 Score = 42.7 bits (99), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 57/208 (27%), Positives = 95/208 (45%), Gaps = 13/208 (6%)

Query: 28   LATLIVSKAGTSLRELQFSKNEYSVSALENLPVNY-VLLTVTTNKPRDLRVKYWL--SND 84
            L T+ +S  G       F   E+SV   E+  +   VL   T  +P   +  Y +   N+
Sbjct: 3202 LGTVTISVVGLEDYLPVFLNTEHSVQVPEDALLGMEVLQLATLTRPGSEKTGYRMVSGNE 3261

Query: 85   YGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDP-RF 142
             G RF + +R G + + + LD+ET   Y  ++  +    ++   +   VVN+ D +  R 
Sbjct: 3262 QG-RFRLDARTGILYVNKSLDFETNPKYFLSIECSRKGSSSLGDMTTIVVNITDINEHRP 3320

Query: 143  RYPQYELFLPHIPLADLTPGSVIGKVEAADGDK--GDRVTLSLRGPYE-KMFSIN-DSGH 198
            R+PQ +L+   + L +   G  +  V A D D      +T SL G  +   F+I+   G 
Sbjct: 3321 RFPQ-DLYSTRV-LENAIVGDTVLTVSATDEDGPLNSAITYSLVGGNQLGHFAIDPKKGE 3378

Query: 199  ISIVD-LSALNTSTIQLVVVATDTGNPP 225
            + +   L    TS+  L + ATD+G PP
Sbjct: 3379 LQVAKALDWEQTSSYSLRLRATDSGRPP 3406



 Score = 41.6 bits (96), Expect = 0.69,   Method: Compositional matrix adjust.
 Identities = 63/202 (31%), Positives = 88/202 (43%), Gaps = 26/202 (12%)

Query: 43   LQFSKNEYSVSALENLPVN--YVLLTVTTNKPRDLRVKYWLSNDYGERFSISRQGDISLM 100
            LQF +N Y  +  ENL      V+L V  N   D  + Y L N   + F + +   +   
Sbjct: 1965 LQFDQNVYRATVKENLQDRKALVILGVQGNHLNDT-LYYSLLNGT-DMFCMVKSAGVLQT 2022

Query: 101  Q--CLDYETEDSYRFTVYATDTLM---TTSATVNISVVNVNDWDPRFRY-PQYELFLPHI 154
            +    D E +D ++  V   D         A V +SV +VND  P F++ P Y +     
Sbjct: 2023 RGVAFDREQQDIHKLAVELRDNRTPQRVAQALVIVSVEDVNDNHPLFKHLPYYTI----- 2077

Query: 155  PLADLT-PGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDS-GHISI---VDLSAL 207
             + D T PG VI +V A+D D G    VT +    Y   F I+   G IS+    D  AL
Sbjct: 2078 -IQDGTEPGDVIFQVSASDQDLGVNGAVTYAFSEEY-TYFRIDPYLGDISLKKPFDYQAL 2135

Query: 208  NTSTIQLVVVATDTGNPPRQAS 229
            N     L V+A D G P  Q +
Sbjct: 2136 N--KYHLKVIAQDGGTPSLQTT 2155



 Score = 41.6 bits (96), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 36/113 (31%), Positives = 53/113 (46%), Gaps = 9/113 (7%)

Query: 128  VNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LR 184
            V+I V + N   PRF    YE  +P   +    PG+ + +V A DGD+G    +    L+
Sbjct: 1540 VSIHVEDGNRHPPRFTQLHYEASVPDTTV----PGTELLQVRAMDGDRGANAEVHYSLLK 1595

Query: 185  GPYEKMFSIND-SGHISIVD-LSALNTSTIQLVVVATDTGNPPRQASVPAIMH 235
            G  E  F+IN   G I++   L+  N +   L V A D G+P        I+H
Sbjct: 1596 GNSEGFFNINALLGIITLAQKLNQTNHARCTLTVKAEDQGSPRWHDLATVIIH 1648



 Score = 40.4 bits (93), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 39/139 (28%), Positives = 63/139 (45%), Gaps = 3/139 (2%)

Query: 11   ITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTN 70
             TL V+A    +   + LAT+I+    +      FSK EY V   E++PV   +L V+  
Sbjct: 1625 CTLTVKAEDQGSPRWHDLATVIIHVHPSESSAPIFSKAEYFVEIPESIPVGSPILLVSAT 1684

Query: 71   KPRDLRVKYWLSNDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDTLMT-TSATV 128
               ++  +    N  G  FS+ S  G IS  + LD+E   SY+  +   +     T   V
Sbjct: 1685 SSSEVTYELREGNKDG-VFSLNSYSGLISTQKNLDHEKISSYQLKIRGCNMAGAFTDILV 1743

Query: 129  NISVVNVNDWDPRFRYPQY 147
             + +++ ND  P F  P +
Sbjct: 1744 VVYIIDENDNAPMFLRPTF 1762


>gi|410913649|ref|XP_003970301.1| PREDICTED: protocadherin-11 X-linked-like [Takifugu rubripes]
          Length = 1231

 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 55/193 (28%), Positives = 93/193 (48%), Gaps = 19/193 (9%)

Query: 42  ELQFSKNEYSVSALENLPVNYVLLTVT-TNKPRDLRVKYWLSNDYGERFSISRQ-GDISL 99
           E+QFS  E +  + E      + L+ T  +  R+  + Y L  D  + F++ R+ G +S+
Sbjct: 470 EIQFSIPENNDPSTE-----LIKLSATDADSGRNAEIIYTLGPDAPDGFNVDRRSGILSV 524

Query: 100 MQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLP-HIP 155
            + LD E ++ Y FTV A D   T + ++ T+ + V ++ND  P F +P+Y  ++P ++P
Sbjct: 525 GKRLDREKQERYVFTVIAKDNGSTSLQSNVTIRLIVQDLNDNSPAFTHPEYNFYVPENLP 584

Query: 156 LADLTPGSVIGKVEAADGDKGDR--VTLSLRGPYEKMFSINDSGHISI-VDLSALNTSTI 212
           L        +G +   D D GD   VTLS+    +       +G I   +       S+ 
Sbjct: 585 LF-----GTVGLITVTDADSGDNAIVTLSILNGKDNFIIDPQTGVIKPNITFDREQQSSY 639

Query: 213 QLVVVATDTGNPP 225
             +V A D G PP
Sbjct: 640 TFMVKAVDGGQPP 652



 Score = 47.4 bits (111), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 82/326 (25%), Positives = 126/326 (38%), Gaps = 67/326 (20%)

Query: 11  ITLVVRAIQYDNQDRYALATLIVSKAGTSLRE---------------LQFSKNEYSVSAL 55
           I  V + +  + Q+RY    +      TSL+                  F+  EY+    
Sbjct: 521 ILSVGKRLDREKQERYVFTVIAKDNGSTSLQSNVTIRLIVQDLNDNSPAFTHPEYNFYVP 580

Query: 56  ENLPV--NYVLLTVTTNKPRDLRVKYWLSNDYGERFSISRQ-GDISLMQCLDYETEDSYR 112
           ENLP+     L+TVT     D  +      +  + F I  Q G I      D E + SY 
Sbjct: 581 ENLPLFGTVGLITVTDADSGDNAIVTLSILNGKDNFIIDPQTGVIKPNITFDREQQSSYT 640

Query: 113 FTVYATDTLMTTS---ATVNISVVNVNDWDPRFRYPQ----YELFLPHIPLADLTPGSVI 165
           F V A D     S   A V I+VV+VND  P F  P     Y+L          TPG+V+
Sbjct: 641 FMVKAVDGGQPPSSSYAKVTINVVDVNDNRPVFVIPSSNYSYDLVR-----TTTTPGAVV 695

Query: 166 GKVEAADGDKGDRVTLSL--------------RGPYEKMFSINDS-GHISIVD-LSALNT 209
            +V A D D G    L                RG    +F+I+ S G+I++ + + A + 
Sbjct: 696 TRVYAIDNDTGMNAELQYSIISSIIITSRVSPRG----LFAIDKSTGNITLQEKIVAADQ 751

Query: 210 STIQLVVVATDTGNPPRQASVPAIMHFPEAIVQQASS-------------KLNSGTSSTV 256
              +LVV   D G P    ++  +  F    V  A+                N G S   
Sbjct: 752 GLHRLVVKVRDLGQPESLHAITLVHLFVNDTVSNATFIQEQLRKSMETPLDRNIGDSEVT 811

Query: 257 LIILGVVLIVL----GFVIILLILYI 278
               G V++V+    G + ++L++++
Sbjct: 812 AQANGYVIVVIAIIAGTMTVILVIFV 837



 Score = 40.8 bits (94), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 38/129 (29%), Positives = 57/129 (44%), Gaps = 12/129 (9%)

Query: 56  ENLPVN-YVLLTVTTNKPRDLRVKYWLSNDYGERFSI----SRQGDISLMQCLDYETEDS 110
           EN P+N  + L   T+K  DL  K     D+   F +    + Q  +     LDYET   
Sbjct: 372 ENAPLNTKIALITVTDKDADLYGKVACYTDHDVPFRLKPVFNDQFLLETAAPLDYETTRE 431

Query: 111 YRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGK 167
           Y   + A+D     + TSA V I + + ND  P F  P+ +  +P     +  P + + K
Sbjct: 432 YAIKIVASDRGTPPLNTSAMVLIKIKDENDNVPIFPQPEIQFSIPE----NNDPSTELIK 487

Query: 168 VEAADGDKG 176
           + A D D G
Sbjct: 488 LSATDADSG 496


>gi|395736298|ref|XP_003776732.1| PREDICTED: protocadherin gamma-B5 [Pongo abelii]
          Length = 818

 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 55/202 (27%), Positives = 96/202 (47%), Gaps = 17/202 (8%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDY---GERFSI-SRQGDISLM 100
           F+++ Y VS  EN+P    +L V+    +D  +   ++  +   G+ F + S+ G+I+  
Sbjct: 242 FNRDVYRVSLRENVPPGTTVLQVSATD-QDEGINSEITYSFYRTGQIFGLNSKSGEITTQ 300

Query: 101 QCLDYETEDSYRFTVYATDTL-MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADL 159
           + LD+E    Y   V A D   +    TV I++ + ND  P   +      L  + L + 
Sbjct: 301 KKLDFEETKEYSMVVEARDGGGLVAQCTVEINIQDENDNSPEVTFHS----LLEMILENA 356

Query: 160 TPGSVIGKVEAADGDKGD--RVTLSLRG--PYEKMFSINDSGHISIVD--LSALNTSTIQ 213
            PG++I  ++  D D G+   V   L+G  P+ KM S + + +  + D  L    T    
Sbjct: 357 VPGTLIALIKIHDQDSGENGEVNCQLQGEVPF-KMISSSKNSYKLVTDGTLDREQTPEYN 415

Query: 214 LVVVATDTGNPPRQASVPAIMH 235
           + + ATD G PP  +S+  I+H
Sbjct: 416 VTITATDRGKPPLSSSISVILH 437



 Score = 43.5 bits (101), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 56/215 (26%), Positives = 89/215 (41%), Gaps = 27/215 (12%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRDL----RVKY-WLSNDY-----GERFSISRQ 94
           F +  Y VS  EN P    +  V  + P DL    +V Y  ++ D          S+S Q
Sbjct: 448 FHQASYLVSVPENNPPGASIAQVCASDP-DLGLNGQVSYSIMAGDLEPLALASYVSVSAQ 506

Query: 95  GDISLMQ-CLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQY--- 147
             +   Q   D+E   ++  T+ A D     ++ + ++ + V + ND  PR  YP     
Sbjct: 507 SGVVFAQRAFDFEQLRTFELTLQARDQGSPALSANVSLRVLVSDRNDNAPRVLYPALGPD 566

Query: 148 -ELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-DSGHISIV 202
                  +P A   PG ++ KV A D D G    LS   L+     +FS+   +G +   
Sbjct: 567 GSALFDMVPRA-AEPGYLVTKVVAVDADSGHNAWLSYHVLQASEPGLFSLGLRTGEVRTA 625

Query: 203 D-LSALNTSTIQLVVVATDTGNPPRQASVPAIMHF 236
             L   + +  +L+V   D G PP  A+  A +H 
Sbjct: 626 RALGDKDAARQRLLVAVRDGGQPPLSAT--ATLHL 658


>gi|301608219|ref|XP_002933688.1| PREDICTED: protocadherin gamma-B5-like [Xenopus (Silurana)
           tropicalis]
          Length = 833

 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 53/200 (26%), Positives = 98/200 (49%), Gaps = 21/200 (10%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKY---WLSNDYGERFSI-SRQGDI 97
           FS+  Y ++  EN P N+V+L +     ++  + ++ Y    +S D G+ F + S+ G+I
Sbjct: 231 FSQETYQINLNENTPDNFVVLHLNASDEDEGSNAQITYSFSHISEDAGQLFKLDSKTGEI 290

Query: 98  SLMQCLDYETEDSYRFTVYATD-TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
           + +  LDYET  +Y+ TV A D   +   + V I +V+ ND  P  +   +   +P    
Sbjct: 291 TKIGKLDYETAKNYKITVEAKDGGGLAAHSKVLIQIVDSNDNAPEIQINSFTSIIPE--- 347

Query: 157 ADLTPGSVIGKVEAADGDKGDR----VTLSLRGPYEKMFSINDSGHISIVDLSALN---T 209
            D  PG+++      D D G+       +S   P++ +   N+  +  +V  S+++   T
Sbjct: 348 -DSPPGTIVALFNIQDLDSGENAEFVCEISKNVPFQLISLPNN--YFKMVTSSSMDREVT 404

Query: 210 STIQLVVVATDTGNPPRQAS 229
              ++ ++ATD G PP   S
Sbjct: 405 CEYKISIMATDKGLPPLSTS 424



 Score = 44.7 bits (104), Expect = 0.088,   Method: Compositional matrix adjust.
 Identities = 42/151 (27%), Positives = 70/151 (46%), Gaps = 37/151 (24%)

Query: 103 LDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADL 159
           +D E    Y+ ++ ATD     ++TS T+ +++ +VND  P F  P Y  ++P     + 
Sbjct: 399 MDREVTCEYKISIMATDKGLPPLSTSKTIQLTISDVNDNAPVFEKPSYIAYVPE----NN 454

Query: 160 TPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSI--ND------SGHISI---------- 201
            PG+ I ++ A+D        L L    + M+SI  N+      S H+SI          
Sbjct: 455 PPGTSIHRINASD--------LDLNENGQIMYSIISNNTEDALVSSHVSINSGTGVVYAL 506

Query: 202 --VDLSALNTSTIQLVVVATDTGNPPRQASV 230
              D   +   + Q  V+A D+G+PP  +SV
Sbjct: 507 HSFDYEQIREFSFQ--VMARDSGSPPLNSSV 535


>gi|426255702|ref|XP_004021487.1| PREDICTED: cadherin-23-like isoform 1 [Ovis aries]
          Length = 1079

 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 60/195 (30%), Positives = 90/195 (46%), Gaps = 20/195 (10%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWLSNDYGERFSIS-RQGDISLM 100
           F +  Y  +  E++PV  V+LTVT           ++Y L +  G +F+IS   GDI ++
Sbjct: 162 FDQLSYQEAVFEDVPVGTVILTVTATDADSGNFALIEYSLVDGEG-KFAISPTTGDIYVL 220

Query: 101 QCLDYETEDSYRFTVYATDT-------LMTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
             LD E +D Y  T  A D            S  V I V++VND  P+F   Q+   +  
Sbjct: 221 SPLDREKKDHYILTALAKDNPGDVASNRRENSVQVVIQVLDVNDCRPQFSKLQFSTSV-- 278

Query: 154 IPLADLTPGSVIGKVEAADGDKGDRVTL--SLRGPYEKMFSIN-DSGHISIVDLSALNTS 210
               +   G+ +  + A D D+G    L  SL GP  + F ++ DSG ++       +  
Sbjct: 279 --YENEPAGTSVITMMATDQDEGSNAELAYSLEGPGVEAFHVDMDSGLVT-TKRPLQSYE 335

Query: 211 TIQLVVVATDTGNPP 225
           +  L VVATD G PP
Sbjct: 336 SFSLTVVATDGGQPP 350



 Score = 38.5 bits (88), Expect = 6.0,   Method: Compositional matrix adjust.
 Identities = 32/122 (26%), Positives = 56/122 (45%), Gaps = 17/122 (13%)

Query: 125 SATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR 184
           +A + +++++VND  P+F+      +   I L   TPG+ +  V A D DKG    ++  
Sbjct: 36  NAKLTVNILDVNDNTPQFKPFGITYYTERI-LEGATPGTTLIAVAAVDPDKGLNGLITY- 93

Query: 185 GPYEKMFSINDSGHISIVDLSALNTSTIQLV-----------VVATDTGNPPRQASVPAI 233
                + ++   G++ + D SA      Q V           V A+D G+PPR A +P  
Sbjct: 94  ----TLLNLMPPGYVQLEDSSAGKVIANQTVDYEEVHWLNFTVRASDNGSPPRAAEIPVY 149

Query: 234 MH 235
           + 
Sbjct: 150 LE 151


>gi|403255750|ref|XP_003920574.1| PREDICTED: protocadherin gamma-A5 [Saimiri boliviensis boliviensis]
          Length = 813

 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 60/197 (30%), Positives = 91/197 (46%), Gaps = 23/197 (11%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWLSND---YGERFSI-SRQGDI 97
           F+++EYSV+  EN+PV   LLT+T   P +    ++ Y   N+     E F + S  G+I
Sbjct: 242 FTRSEYSVTVPENIPVGTRLLTLTATDPDEGINGKLTYSFRNEEDKISETFQLDSNLGEI 301

Query: 98  SLMQCLDYETEDSYRFTVYATD-TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
           S +Q LDYE    Y   V A D   +  SA V ++V +VND  P       E+ L  +  
Sbjct: 302 STIQSLDYEESRFYFMEVVAQDGGALLASAKVLVTVQDVNDNAP-------EVILTSLTG 354

Query: 157 A---DLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMF----SINDSGH-ISIVDLSALN 208
           +   D  PG+VI      D D G+   ++   P    F    S+++  H ++   L    
Sbjct: 355 SLSEDCLPGTVIALFSVHDDDSGENGEIACSIPRNLPFKLEKSVDNYYHLLTTRHLDREE 414

Query: 209 TSTIQLVVVATDTGNPP 225
           TS   + +   D G PP
Sbjct: 415 TSDYNITLTVIDHGTPP 431



 Score = 48.9 bits (115), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 71/281 (25%), Positives = 117/281 (41%), Gaps = 48/281 (17%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPR---DLRVKYWLSNDYGERFSISR-------Q 94
           F +  YS S  EN P    + +V  + P    + R+ Y L+ D  +   +S         
Sbjct: 452 FLQASYSTSLPENNPRGVSIFSVMAHDPDSGDNARITYSLAEDTFQGVPLSSYVSINSDT 511

Query: 95  GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFL 151
           G +  ++  DYE     +  V A D     ++++ ++N+ V++ ND  P   YP     L
Sbjct: 512 GVLYALRSFDYEQLRELQLWVTARDNGNPPLSSNVSLNLFVLDQNDNTPEILYPT----L 567

Query: 152 P-----HIPLA--DLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-DSGHI- 199
           P      + LA     PG ++ KV A D D G    LS   L+     +F++   +G + 
Sbjct: 568 PTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYRLLKASEPGLFTVGLHTGEVR 627

Query: 200 ---SIVDLSALNTSTIQLVVVATDTGNPPRQASVPAIM----HFPEAIVQQASSKLNSGT 252
              +++D  +L  S   LV+   D G PP  A+V   M      P+ +    S K  +  
Sbjct: 628 TARALLDRDSLKQS---LVMAVEDHGQPPLSATVTLTMAVADRIPDILGDLGSIKTPTDP 684

Query: 253 SSTVLII------LGVVLIVLGFVIILLILYIHKNKHTKNN 287
               L          V  + L FVI+LL+L +   +H  N+
Sbjct: 685 EDLDLTFYLVVAVAAVSCVFLAFVIVLLVLRL---RHWHNS 722



 Score = 40.4 bits (93), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 46/141 (32%), Positives = 59/141 (41%), Gaps = 17/141 (12%)

Query: 103 LDYETEDSYRFTVYATDTLMTTSATVN---ISVVNVNDWDPRFRYPQYELFLPHIPLADL 159
           LD E    Y  T+   D      +TVN   + V +VND  P F    Y   LP     + 
Sbjct: 410 LDREETSDYNITLTVIDHGTPPLSTVNHILLKVADVNDNPPNFLQASYSTSLPE----NN 465

Query: 160 TPGSVIGKVEAADGDKGD--RVTLSLRG------PYEKMFSIN-DSGHI-SIVDLSALNT 209
             G  I  V A D D GD  R+T SL        P     SIN D+G + ++        
Sbjct: 466 PRGVSIFSVMAHDPDSGDNARITYSLAEDTFQGVPLSSYVSINSDTGVLYALRSFDYEQL 525

Query: 210 STIQLVVVATDTGNPPRQASV 230
             +QL V A D GNPP  ++V
Sbjct: 526 RELQLWVTARDNGNPPLSSNV 546


>gi|395501475|ref|XP_003755120.1| PREDICTED: protocadherin-15 [Sarcophilus harrisii]
          Length = 1782

 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 60/195 (30%), Positives = 99/195 (50%), Gaps = 14/195 (7%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGER-FSISRQ-GDISLMQ 101
           +F +  YS+   E + +  VLL +         + Y + N   +R F++S   G ++L +
Sbjct: 598 RFPQLMYSLEVSEAMRIGAVLLNLQATDREHDPITYAIENGDPQRVFNLSETTGILTLGK 657

Query: 102 CLDYETEDSYRFTVYATDTL--MTTSATVNISVVNVNDWDPRFRYPQYELFLP-HIPLAD 158
            LD E+ D Y   V A+D     T++ATVNI V +VND  P F     + +LP ++ + +
Sbjct: 658 ALDRESTDRYILIVTASDGRPDGTSTATVNIVVTDVNDNAPTF-----DPYLPRNLSVVE 712

Query: 159 LTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDSGHI-SIVDLSALNTSTIQLV 215
               + +G+V A D D G   +V  SL G +  +F I  +G I + V L+       +LV
Sbjct: 713 EEANAFVGQVRATDPDAGINGQVHYSL-GNFNNLFWITSNGTIYTRVKLNREVRDYYELV 771

Query: 216 VVATDTGNPPRQASV 230
           V+ATD    PR +++
Sbjct: 772 VIATDGAVHPRHSTL 786



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 54/196 (27%), Positives = 91/196 (46%), Gaps = 30/196 (15%)

Query: 6   DFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVL- 64
           DF Q   LV++A Q +     A A+L +     + +   F+   Y    LE+ PV   + 
Sbjct: 332 DFYQKFDLVIKAEQDNGHPLPAFASLHIEILDENNQSPYFTMPSYQGYILESAPVGATIS 391

Query: 65  --LTVTT------------NKP------RDLRVKYWLSNDYGERFSISRQG---DISLMQ 101
             L +TT            + P      +D  V  +L NDY   F+++  G    ++L+Q
Sbjct: 392 DNLNLTTPLRIVVLDKDVEDVPPGGIPTKDPEVHLFL-NDYTSVFTVTPSGITRYLTLLQ 450

Query: 102 CLDYETEDSYRFTVYATDTLMTTS-ATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLT 160
            +D E +  Y F++ A D +  +S  TVNI V++ ND  P F    Y +++      D++
Sbjct: 451 PVDREEQQYYTFSITAFDGVQESSPVTVNIKVIDANDNTPTFPAISYNVYV----YTDMS 506

Query: 161 PGSVIGKVEAADGDKG 176
           PG  + ++ A D D+G
Sbjct: 507 PGDSVIQLTAVDADEG 522



 Score = 46.6 bits (109), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 49/171 (28%), Positives = 83/171 (48%), Gaps = 17/171 (9%)

Query: 76  RVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDTLMT---TSATVNISV 132
           +V Y L N +   F I+  G I     L+ E  D Y   V ATD  +    ++ T+ I V
Sbjct: 734 QVHYSLGN-FNNLFWITSNGTIYTRVKLNREVRDYYELVVIATDGAVHPRHSTLTLAIRV 792

Query: 133 VNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEK-MF 191
           ++++D  P F    Y + +      +L  G++  ++EA D D G  V+  +R P  K +F
Sbjct: 793 LDIDDNSPVFTNSTYTVVVEE----NLPAGAIFLQIEATDVDLGANVSYRIRSPEVKHLF 848

Query: 192 SIND-SGHISI---VDLSAL--NTSTIQLVVVATDTGN--PPRQASVPAIM 234
           +++  +G +S+   +D  +   N + I  +V A D G   PP  A+V  I+
Sbjct: 849 ALHPFTGELSLLKSLDYESFPENEAYITFLVEAFDIGGTMPPGIATVTVIV 899



 Score = 45.1 bits (105), Expect = 0.057,   Method: Compositional matrix adjust.
 Identities = 59/200 (29%), Positives = 92/200 (46%), Gaps = 24/200 (12%)

Query: 45  FSKNEYSVSALENLPVNYVLLTV-TTNKPRDLRVKYWL-SNDYGERFSISR-QGDISLMQ 101
           F+ + Y+V   ENLP   + L +  T+      V Y + S +    F++    G++SL++
Sbjct: 802 FTNSTYTVVVEENLPAGAIFLQIEATDVDLGANVSYRIRSPEVKHLFALHPFTGELSLLK 861

Query: 102 CLDYET----EDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHI 154
            LDYE+    E    F V A D   T+    ATV + V ++ND+ P F    Y+  +   
Sbjct: 862 SLDYESFPENEAYITFLVEAFDIGGTMPPGIATVTVIVKDMNDYPPVFSKRLYKGMV--- 918

Query: 155 PLADLTPGSVIGKVEAADGDKGDRVTLSLR-------GPY-EKMFSIND-SGH-ISIVDL 204
              D   G++I  V A D D        +R        PY   +F I + SG  I+ V+L
Sbjct: 919 -APDAVKGTLITTVFAEDADPPGLPASHVRYRVEDKQYPYPASIFDIEEYSGRVITRVNL 977

Query: 205 SALNTSTIQLVVVATDTGNP 224
           +   ++  +L VVA D G P
Sbjct: 978 NEEPSTIFKLEVVAFDDGEP 997


>gi|431902348|gb|ELK08849.1| Protocadherin Fat 1 [Pteropus alecto]
          Length = 4588

 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 41/156 (26%), Positives = 78/156 (50%), Gaps = 11/156 (7%)

Query: 33   VSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYW---LSNDYGERF 89
            +SK   SL  + F ++ ++ + +E+ PV +++  ++   P       W   +  +Y   F
Sbjct: 1346 ISKPKPSLEPIAFEESFFTFTVMESDPVAHMIGVISVEPPG---TPLWFDIIGGNYDSHF 1402

Query: 90   SISR-QGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYE 148
             + +  G I + + LD E + +Y  TV ATD   T    V I V++ ND  P+F   +YE
Sbjct: 1403 DVDKGTGTIIVAKPLDAEQKSNYNLTVEATDGTSTILTQVFIKVIDTNDHRPQFSTSKYE 1462

Query: 149  LFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR 184
            + +P     D  P + I ++ A D D+ +++  +L+
Sbjct: 1463 VIIPE----DTGPETEILQISAVDKDEKNKLIYTLQ 1494



 Score = 57.8 bits (138), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 63/201 (31%), Positives = 97/201 (48%), Gaps = 23/201 (11%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSN-DYGERFSIS-RQGDISLMQC 102
            F K  YS    EN+ ++  ++ V  N P  L+V Y + + D   +FSI+   G I+++  
Sbjct: 2182 FEKPFYSAEIPENIQMHSPVVHVQANSPEGLKVLYSIPDGDPFSQFSINFNTGVINVIAP 2241

Query: 103  LDYETEDSYRFTVYATDTLMTTSATVNISVV--NVNDWDPRFRYPQYELFLPHIPLADLT 160
            LD+E+  +Y+ +V ATD+L    A V + V+  +VND  P F    Y        +A L+
Sbjct: 2242 LDFESHPAYKLSVRATDSLTGAHAEVFVDVIVEDVNDNPPVFVQQSY--------VATLS 2293

Query: 161  PGSVIG----KVEAADGDK--GDRVTLSLRGPYEK---MFSINDS-GHISIVD-LSALNT 209
              SVIG    +V A D D      ++  + G + K    F I+ S G IS+V  L     
Sbjct: 2294 EASVIGTSVIQVRATDSDSEPNRGISYHMFGNHSKSHDHFHIDGSTGVISLVRTLDYEQF 2353

Query: 210  STIQLVVVATDTGNPPRQASV 230
               ++ V A D G PP  + V
Sbjct: 2354 QQHRIFVRAVDGGMPPLSSDV 2374



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 60/217 (27%), Positives = 103/217 (47%), Gaps = 18/217 (8%)

Query: 29   ATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTV-TTNKPRDL--RVKYWLSNDY 85
            A + V+  G +L    F +NEY     EN P++ +++ V  T+    +   + Y + ND+
Sbjct: 2476 AQVRVAVIGGNLHSPVFLQNEYEAELAENAPLHTLVIEVKATDGDSGIYGHITYHIVNDF 2535

Query: 86   G-ERFSISRQGDISLMQCLDYET--EDSYRFTVYATDTLMTTS-ATVNISVVNVNDWDPR 141
              +RF  + +G I  ++ LD ET  E      + A D     +  T+N+ + + ND  P+
Sbjct: 2536 AKDRFYTNERGQIFTLEKLDRETPAEKVIAVRLMAKDAGGKVAFCTINVILTDDNDNAPQ 2595

Query: 142  FRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDR--VTLSLRGPYEKM---FSIND- 195
            FR  +YE+ +     +    G+ + KV A+D D+G    VT ++    E +     IN  
Sbjct: 2596 FRATKYEVNIG----SSAPKGTSVIKVLASDADEGSNADVTYAIEADSESVKENLEINKL 2651

Query: 196  SGHISIVD-LSALNTSTIQLVVVATDTGNPPRQASVP 231
            SG I+  + L  L        V A D G+P +++ VP
Sbjct: 2652 SGIITTKESLIGLENEFFTFFVRAVDNGSPSKESVVP 2688



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/145 (29%), Positives = 70/145 (48%), Gaps = 8/145 (5%)

Query: 90   SISRQGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYEL 149
            +I  +  + + + LD E  D+Y  T+ ATD   ++ A V + V++ ND  P      Y  
Sbjct: 2971 NIQNEWKVYVKKPLDREKRDNYLLTITATDGTFSSKAIVEVKVLDANDNSPVCEKTLYSD 3030

Query: 150  FLPHIPLADLTPGSVIGKVEAADGD--KGDRVTLSLRGPYEKMFSIN-DSGHI-SIVDLS 205
             +P     D  PG +I +V A D D      +T +L GP  + F +N D+G + ++  L 
Sbjct: 3031 TIPE----DSFPGKLIMQVSATDADIRSNAEITYTLSGPGAEKFKLNPDTGELKTLAPLD 3086

Query: 206  ALNTSTIQLVVVATDTGNPPRQASV 230
                +   L+V ATD G    QA++
Sbjct: 3087 REEQAIYNLLVKATDGGGRFCQANI 3111



 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 65/226 (28%), Positives = 108/226 (47%), Gaps = 21/226 (9%)

Query: 13   LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALEN----LPVNYVLLTVT 68
            L+V+A   D   R+  A ++++    +    +FS + Y+++  EN     P+  V  T  
Sbjct: 3095 LLVKAT--DGGGRFCQANIMLTLEDVNDNAPEFSADPYTITVFENTEPGTPLTRVQAT-D 3151

Query: 69   TNKPRDLRVKYWLSNDYGERFSISR-QGDISLMQCLDYETEDSYRFTVYATDT----LMT 123
             +   + ++ Y L N    +FSI+   G I L + LD E +  Y  T+ A D      +T
Sbjct: 3152 ADAGLNRKISYSLINSADGQFSINELSGIIQLEKPLDRELQSVYTLTLKAVDQGLPRRLT 3211

Query: 124  TSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAA--DGDKGDRVTL 181
             + TV +SV+++ND  P F Y +Y   +      D+  G+ I +V AA  D +    +T 
Sbjct: 3212 ATGTVIVSVLDINDNPPVFEYREYGTTVSE----DILTGTEILQVYAASRDIEANAEITY 3267

Query: 182  S-LRGPYEKMFSIND-SGHISIVD-LSALNTSTIQLVVVATDTGNP 224
            S + G     FSI+  +G I I++ L   ++    L V ATD G P
Sbjct: 3268 SIISGNEHGKFSIDSKTGAIFIIENLDYESSHEYYLTVEATDGGTP 3313



 Score = 54.3 bits (129), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 80/303 (26%), Positives = 138/303 (45%), Gaps = 32/303 (10%)

Query: 5    DDFLQPI-TLVVRAIQYDNQDRY-ALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNY 62
            D  LQ + TL ++A+      R  A  T+IVS    +     F   EY  +  E++    
Sbjct: 3188 DRELQSVYTLTLKAVDQGLPRRLTATGTVIVSVLDINDNPPVFEYREYGTTVSEDILTGT 3247

Query: 63   VLLTVTTNKPRDLRVKYWLS------NDYGERFSI-SRQGDISLMQCLDYETEDSYRFTV 115
             +L V     RD+     ++      N++G +FSI S+ G I +++ LDYE+   Y  TV
Sbjct: 3248 EILQVYA-ASRDIEANAEITYSIISGNEHG-KFSIDSKTGAIFIIENLDYESSHEYYLTV 3305

Query: 116  YATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAAD 172
             ATD     ++  A VNI+V ++ND  P F    Y   +    + + +  +V+   + AD
Sbjct: 3306 EATDGGTPSLSDVAAVNINVTDINDNTPVFSQDTYTAVVSEDAVLEQSVITVMA--DDAD 3363

Query: 173  GDKGDRVTLS-LRGPYEKMFSINDS-GHISIVDLSALNTSTIQ---LVVVATDTGNPPRQ 227
            G     +  S + G     F+I+ + G + +  L  L+  TI    L + A+D G+PPR 
Sbjct: 3364 GPSNSHIHYSIIDGNQGSPFTIDPARGEVRVTKL--LDRETISGYTLTIQASDNGSPPRV 3421

Query: 228  ASVPAIMHFPEAIVQQASSKLNSGTSSTVLIILGVVLIVLGFVIILLILYIHKNKHTKNN 287
             +    +   +  V   +   + G  S ++     V    GF ++ L++    +K + +N
Sbjct: 3422 NTTTVNIDVSD--VNDNAPIFSRGNYSVIIQENKPV----GFSVLQLVV---TDKDSSHN 3472

Query: 288  GPP 290
            GPP
Sbjct: 3473 GPP 3475



 Score = 46.6 bits (109), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 59/236 (25%), Positives = 107/236 (45%), Gaps = 24/236 (10%)

Query: 4    EDDFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYV 63
            E++F    T  VRA+   +  + ++  + V    + ++  +FS+  Y+ +  E++P+   
Sbjct: 2665 ENEFF---TFFVRAVDNGSPSKESVVPVYVKILPSEMQLPKFSEPFYTYTVSEDMPIGTE 2721

Query: 64   LLTVTTNKPRDLRVKYWLSN----DYGERFSISRQ-GDISLMQCLDYETEDSYRFTVYAT 118
            +  +       +       N    +  E F I +Q G + L + LD+ET   Y+F++ A 
Sbjct: 2722 IDLIQAEHSGTVLYSLVKGNTPESNRDEFFVIDKQSGRLKLEKSLDHETTKWYQFSILAR 2781

Query: 119  ----DTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGD 174
                D  +  S  V+I V + ND  P      YE F+    + +   GS + ++ A+D D
Sbjct: 2782 CTHDDYEVVASVDVSIQVKDANDNSPVLESNPYEAFI----VENQPGGSRVIQIRASDLD 2837

Query: 175  KG--DRVTLSLRGPYE----KMFSIN-DSGHISIV-DLSALNTSTIQLVVVATDTG 222
             G   +V  SL         + FSIN ++G I+ + +L        Q+ VVA+D G
Sbjct: 2838 SGTNGQVMYSLDQSQSVEVIESFSINMETGWITTLKELDHERRDNYQIKVVASDYG 2893



 Score = 44.3 bits (103), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 54/191 (28%), Positives = 87/191 (45%), Gaps = 30/191 (15%)

Query: 56   ENLPVNYVLLTVTTNKP---RDLRVKYWLSNDYG-ERFSISRQ-GDISLMQCLDYETEDS 110
            E++P+   ++TV+ +     RD  V+Y + +  G   F I  + G I     LD E+   
Sbjct: 1045 EDVPIGSSVMTVSAHDEDTGRDGEVRYSIRDGSGVGVFKIDEETGVIETSDRLDRESTSH 1104

Query: 111  YRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSV-IG 166
            Y  TVYATD     +++   + I V +VND  P+   P   ++ P +   + +P  V + 
Sbjct: 1105 YWLTVYATDQGVVPLSSFTEIYIEVEDVNDNAPQTSEP---VYYPEV--MENSPKDVSVV 1159

Query: 167  KVEAADGDKGDRVTLSLRGPYEKMFSINDSGHISIVDLSALNTSTIQ-----------LV 215
            ++EA D D      L+      K+ S N  G  SI   + L T+T +           L 
Sbjct: 1160 QIEAFDPDSSSNDKLTY-----KITSGNPQGFFSIHPKTGLITTTSRKLDREQQDEHILE 1214

Query: 216  VVATDTGNPPR 226
            V  TD G+PP+
Sbjct: 1215 VTVTDNGSPPK 1225



 Score = 43.5 bits (101), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 31/93 (33%), Positives = 50/93 (53%), Gaps = 9/93 (9%)

Query: 87   ERFSISRQ-GDISLMQCLDYETEDSYRFTVYATD----TLMTTSATVNISVVNVNDWDPR 141
            E FSI+ + G I+ ++ LD+E  D+Y+  V A+D      ++++A V ++V +VND  PR
Sbjct: 2858 ESFSINMETGWITTLKELDHERRDNYQIKVVASDYGEKVQLSSTAIVAVTVTDVNDSPPR 2917

Query: 142  FRYPQYELFLPHIPLADLTPGSVIGKVEAADGD 174
            F    Y+  +      D  PG VI  +   D D
Sbjct: 2918 FTAEIYKGTVSE----DDPPGGVIAILSTTDAD 2946



 Score = 41.2 bits (95), Expect = 0.83,   Method: Compositional matrix adjust.
 Identities = 55/195 (28%), Positives = 86/195 (44%), Gaps = 20/195 (10%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTTNKPRDL----RVKYWLSNDYGERFSI-SRQGDIS 98
            +F +  Y V   E+  VN  ++ V     +DL     V Y +  D  ++F+I S  G + 
Sbjct: 821  EFLQESYFVEVSEDKEVNSEIIQVEATD-KDLGSNGHVTYSILTD-TDKFAIDSMTGVVR 878

Query: 99   LMQCLDYETEDSYRFTVYATDTL-----MTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
            ++  LD E +  +   + A D       + +   + +S+ +VND  PRF  P Y + +  
Sbjct: 879  VVYPLDREAQPVHYLKIEARDQATEEPQLFSIVLLKVSLEDVNDNPPRFIPPNYRVKV-- 936

Query: 154  IPLADLTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSIND-SGHISIV-DLSALNT 209
                DL  G++I  +EA D D G   +V  SL    E  F ++  SG + IV  L     
Sbjct: 937  --REDLPEGTIIMWLEAYDPDLGQSSQVRYSLLDHGEGNFDVDKLSGAVRIVQQLDFEKK 994

Query: 210  STIQLVVVATDTGNP 224
                L V A D G P
Sbjct: 995  QVYNLTVRAKDKGKP 1009



 Score = 40.8 bits (94), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 43/162 (26%), Positives = 72/162 (44%), Gaps = 14/162 (8%)

Query: 45   FSKNEYSVSALENLPVNY-VLLTVTTNKPRDLRVKYWL-----SNDYGERFSISRQGDIS 98
            FS+  YSV   EN PV + VL  V T+K        +       ND    F +++QG + 
Sbjct: 3440 FSRGNYSVIIQENKPVGFSVLQLVVTDKDSSHNGPPFFFTIVNGND-DNAFEVNQQGVLL 3498

Query: 99   LMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIP 155
                +  + +D Y   V   D     +++   ++I V+  + + P       E+F+    
Sbjct: 3499 TSAAVRKKVKDHYLLHVKVADNGKPQLSSLTYIDIRVIEESIYPPAIL--PLEIFI--TA 3554

Query: 156  LADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSG 197
              +   G VIGK+ A D D  D +T SL    + +FS++ +G
Sbjct: 3555 FGEEYSGGVIGKIHATDQDVYDTLTYSLDPQMDNLFSVSSTG 3596



 Score = 39.7 bits (91), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 39/125 (31%), Positives = 55/125 (44%), Gaps = 12/125 (9%)

Query: 95   GDISLMQCLDYETEDSYRFTVYATDTLM---TTSATVNISVVNVNDWDPRFRYPQYELFL 151
            G ISL++ LDYE    +R  V A D  M   ++   V + V ++ND  P F    YE  +
Sbjct: 2340 GVISLVRTLDYEQFQQHRIFVRAVDGGMPPLSSDVIVTVDVTDLNDNPPLFDQQLYEAKI 2399

Query: 152  PHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSINDSGHISIVDLSALN 208
                    T G  +  V+A D D  D   L    L G   K F+I+      I+ LS L 
Sbjct: 2400 SE----HATHGHFVTCVKAHDADSSDIDKLEYSILSGNDHKNFAID--SETGIITLSNLR 2453

Query: 209  TSTIQ 213
              T++
Sbjct: 2454 RHTLK 2458


>gi|334311099|ref|XP_001377956.2| PREDICTED: protocadherin gamma-B5 [Monodelphis domestica]
          Length = 934

 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 61/230 (26%), Positives = 100/230 (43%), Gaps = 17/230 (7%)

Query: 13  LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPV-NYVLLTVTTNK 71
           L++ A+   N  R + A + +     +     FS++ Y VS LENLP  ++VL    ++K
Sbjct: 210 LILSAVDGGNPARSSTAQIRIKVTDANDNAPVFSQDIYKVSLLENLPPGSFVLRVEASDK 269

Query: 72  PRDLRVKYWLSNDYG-----ERFSIS-RQGDISLMQCLDYETEDSYRFTVYATD-TLMTT 124
              +  +   S D       + FS+    G+I+ ++ LD+E    Y   + A D   + T
Sbjct: 270 DEGVNAEITFSFDSSSHREWQMFSLDPNSGEITSLKNLDFEKTKDYSMVLEARDGGGLVT 329

Query: 125 SATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLS 182
             T+ I +++VND  P   +      +P     D  PGSV+  V+  D D G    VT  
Sbjct: 330 QCTIEIEILDVNDNLPEVIFTSISATIPE----DCFPGSVVALVKTLDQDSGVNGEVTCY 385

Query: 183 LRGPYEKMFSINDSGHISIVDLSALNTSTI---QLVVVATDTGNPPRQAS 229
           + G        +   +  ++    L+   I    + V ATD GNPP   S
Sbjct: 386 VEGNAPFRLESSSKNYYKLLTDGPLDREQIPEYNITVTATDKGNPPLSTS 435



 Score = 55.1 bits (131), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 53/210 (25%), Positives = 90/210 (42%), Gaps = 22/210 (10%)

Query: 95  GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYP----QY 147
           GDI   +  DYE   ++  T+ A D+    +  + T+ + V++ ND  P   YP      
Sbjct: 512 GDIFAQRSFDYEQVRTFELTLQACDSGSPALCANVTLRVFVLDRNDNAPNILYPALGPDR 571

Query: 148 ELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-DSGHISIVD 203
                 +P +   PG ++ KV A D D G    L+   L+     +FS+   +G I    
Sbjct: 572 SALFDMVPRS-AEPGYLVSKVVAVDADSGHNAWLAYRVLQATDPGLFSLGLRTGEIRTAR 630

Query: 204 -LSALNTSTIQLVVVATDTGNPPRQASVPAIMHFP----EAIVQQASSKLNSGTSSTVLI 258
            L+  + +  +L+V   D G PP  A+V   + F     EA+ +      N  T   V  
Sbjct: 631 VLTDRDAARHRLLVSVQDGGQPPLSATVALHLVFADSLQEALPEMKEQSENLPTQWKVNF 690

Query: 259 ILGVVLIVLGFV-----IILLILYIHKNKH 283
            L + L ++ FV     + +++    K+KH
Sbjct: 691 FLVIALALVSFVFFLSAVFMVVFKCRKSKH 720



 Score = 41.6 bits (96), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 43/141 (30%), Positives = 68/141 (48%), Gaps = 17/141 (12%)

Query: 103 LDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADL 159
           LD E    Y  TV ATD     ++TS T+ +++ +VND  P F  P Y +++P     + 
Sbjct: 410 LDREQIPEYNITVTATDKGNPPLSTSKTLTLNIADVNDNHPVFLQPSYVVYVPE----NN 465

Query: 160 TPGSVIGKVEAADGD-KGD-RVTLSLRG------PYEKMFSIN-DSGHI-SIVDLSALNT 209
              + I +V A+D D +G+ RV+ S+        P     S+N  SG I +         
Sbjct: 466 PSAASIARVSASDSDLEGNGRVSYSIVSSDLAPLPLSSYVSVNGHSGDIFAQRSFDYEQV 525

Query: 210 STIQLVVVATDTGNPPRQASV 230
            T +L + A D+G+P   A+V
Sbjct: 526 RTFELTLQACDSGSPALCANV 546


>gi|156382383|ref|XP_001632533.1| predicted protein [Nematostella vectensis]
 gi|156219590|gb|EDO40470.1| predicted protein [Nematostella vectensis]
          Length = 2676

 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 68/218 (31%), Positives = 99/218 (45%), Gaps = 19/218 (8%)

Query: 21  DNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYV---LLTVTTNKPRDLRV 77
           D   R   AT+ VS    +  +  F  + YSV   EN  +      L  +  + P+    
Sbjct: 575 DGGGRSCNATVHVSLTDLNDNQPVFDPSSYSVEYFENTRIGQSICQLKAIDRDSPKFAIT 634

Query: 78  KYWLS-NDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDTLMTTS---ATVNISVV 133
           ++ +   +  E FS+   G I+L + LD ET+D+Y  TV A D     S   A VNI+V+
Sbjct: 635 RFIIEQGNADEVFSVDGSGLITLAKLLDRETQDNYLLTVKAVDGGGQDSVNKAIVNITVL 694

Query: 134 NVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGD--RVTLSL-RGPYEKM 190
           +VND  P F   +Y   +     A     SVIG V A   DKG    V  S+ +G  + +
Sbjct: 695 DVNDEPPIFSKAEYNFTIQEHSQA----LSVIGHVHAISRDKGTNAEVVYSISKGNTDNI 750

Query: 191 FSINDSGHI---SIVDLSALNTSTIQLVVVATDTGNPP 225
             IN +G +   S VD   +   ++ L V A D G PP
Sbjct: 751 VLINSTGTLYLQSEVDHEKI--PSLYLTVQAKDKGTPP 786



 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 61/208 (29%), Positives = 100/208 (48%), Gaps = 22/208 (10%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTT-NKPRDLRVKYWL---SNDYGERFSISRQ-GDISL 99
            F ++ Y     E +PV  +++ V+  +K      + W    S D    F+I R+ G I  
Sbjct: 2407 FGQSGYMAQWSEGIPVGTIVVNVSAADKDSGANGRVWFAIQSGDDKGSFAIDRKTGVIRT 2466

Query: 100  MQCLDYETEDSYRFTVYATDTL---MTTSATVNISVVNVNDWDPRFRYPQYE--LFLPHI 154
             + LD+ET  ++  +V ATD     M T  +V I V+++ND  P FR P       L ++
Sbjct: 2467 QRALDHETIKTHHVSVRATDEGSPPMHTDVSVTIRVLDLNDNPPVFRVPGPNDVQVLENL 2526

Query: 155  PLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIND-SGHISI-VDLSALNT 209
            PL      S + ++ A D D G    LS   + G  + +F I+  SG ++  +     NT
Sbjct: 2527 PL-----NSRLYEINATDRDSGANARLSFTVIGGTGQGLFLIDKFSGWLTTNITFDYENT 2581

Query: 210  STIQ--LVVVATDTGNPPRQASVPAIMH 235
            +  Q  L + ATD GNPP  +++  I++
Sbjct: 2582 AVYQYSLTIKATDAGNPPLSSNITIIVN 2609



 Score = 48.1 bits (113), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 62/203 (30%), Positives = 100/203 (49%), Gaps = 25/203 (12%)

Query: 44   QFSKNEYSVSALENLPVNYVLLT-VTTNKPR---DLRVKYWLSNDYGERFSISR-QGDIS 98
            +FSKN+YSV+  E+LPV   LLT + T+  +   +  + Y +     + FS+++  G ++
Sbjct: 1118 KFSKNKYSVTVNEDLPVGSSLLTLIATDDDQQGPNSDITYMIVAG-PKAFSLNQVTGVLT 1176

Query: 99   LMQCLDYETEDSYRFTVYATDT----LMTTSATVNISVVNVNDWDPRFRYPQY--ELFLP 152
            L+  LD E    +   V A+D      + T   + I+V++VND      YP +  E    
Sbjct: 1177 LVSPLDREVTHRHILHVVASDKGGNQSLETITYIEINVLDVND-----NYPVFINETTFK 1231

Query: 153  HIPLADLTPGSVIGKVEAADGDKGDRVTLSLR---GPYEKMFSINDSGHISIVDLSALN- 208
             +P   L  GSV+  V A D D+GD   +  +   G  +  F IN++  + I  L AL+ 
Sbjct: 1232 TVP-EKLPIGSVVAAVLAVDSDQGDNGKVRYKIVNGNTDGTFKINETTGV-ISTLRALDF 1289

Query: 209  --TSTIQLVVVATDTGNPPRQAS 229
              T+   L V ATD G   ++ S
Sbjct: 1290 EVTNRYVLRVSATDMGKKQQKTS 1312



 Score = 47.4 bits (111), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 63/204 (30%), Positives = 92/204 (45%), Gaps = 21/204 (10%)

Query: 41   RELQFSKNEYSVSALENLPVNYVLLTV-TTNKPRDL---RVKYWLSNDYGERFSISRQGD 96
            RE +F    Y     EN  +   +LTV  T+    L   R+ Y + N    R    R G 
Sbjct: 2300 REPKFELPSYFGKVPENAMMGTSVLTVRVTDNAAGLPLGRISYNIENSNYFRIG-QRSGV 2358

Query: 97   ISLMQCLDYETEDSYRFTVYATDTLMTTSAT---VNISVVNVNDWDPRFRYPQY-ELFLP 152
            IS+ + LDYET+  +   V A D    +      V I+V +VND  P F    Y   +  
Sbjct: 2359 ISVNKPLDYETKRRFLLVVSAIDDTAPSKPVRVPVYINVSDVNDEKPVFGQSGYMAQWSE 2418

Query: 153  HIPLADLTPGSVIGKVEAADGDKG--DRVTLSLR-GPYEKMFSINDSGHISIVDLSALNT 209
             IP+     G+++  V AAD D G   RV  +++ G  +  F+I+    + I    AL+ 
Sbjct: 2419 GIPV-----GTIVVNVSAADKDSGANGRVWFAIQSGDDKGSFAIDRKTGV-IRTQRALDH 2472

Query: 210  STIQ---LVVVATDTGNPPRQASV 230
             TI+   + V ATD G+PP    V
Sbjct: 2473 ETIKTHHVSVRATDEGSPPMHTDV 2496



 Score = 46.6 bits (109), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 50/195 (25%), Positives = 84/195 (43%), Gaps = 20/195 (10%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYG-ERFSISRQGDISLM 100
            F    Y+   LE  P +  ++ V     +   + R+ Y   +     +F +   G I + 
Sbjct: 912  FGNWSYTAHVLETTPPDSNIIEVVATDVDSGENGRISYAFDSKVDTSKFGLRNGGKIFIK 971

Query: 101  QCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLP-HIPL 156
              LD E  + Y   V A D      ++SA V + V +VND +P F+   Y  F+  + P+
Sbjct: 972  SKLDREDIEEYNLKVIAIDHGTPRRSSSADVKVIVDDVNDNNPHFQQASYAFFVKENEPV 1031

Query: 157  ADLTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSINDSGHIS---IVDLSALNTST 211
            A     + +G V A+D D+G    VT        +      +G I+   ++D  A   ++
Sbjct: 1032 A-----TYLGAVSASDSDEGSNGHVTYRFDTQVAQFIVDKQTGKITTSQVLDREA--KAS 1084

Query: 212  IQLVVVATDTGNPPR 226
                +VATD G+ PR
Sbjct: 1085 YVFSIVATDGGSSPR 1099



 Score = 45.8 bits (107), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 63/239 (26%), Positives = 106/239 (44%), Gaps = 20/239 (8%)

Query: 4   EDDFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALEN---LPV 60
           +D++L    L V+A+    QD    A + ++    +     FSK EY+ +  E+   L V
Sbjct: 666 QDNYL----LTVKAVDGGGQDSVNKAIVNITVLDVNDEPPIFSKAEYNFTIQEHSQALSV 721

Query: 61  NYVLLTVTTNKPRDLRVKYWLSNDYGERFS-ISRQGDISLMQCLDYETEDSYRFTVYATD 119
              +  ++ +K  +  V Y +S    +    I+  G + L   +D+E   S   TV A D
Sbjct: 722 IGHVHAISRDKGTNAEVVYSISKGNTDNIVLINSTGTLYLQSEVDHEKIPSLYLTVQAKD 781

Query: 120 TL---MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG 176
                +   A V I+V+++ND  P+F      + LP     D   G     V   D D G
Sbjct: 782 KGTPPLFGYANVTIAVIDINDNSPQFNSSSILVRLPE----DTPIGHTFYTVSVFDADSG 837

Query: 177 --DRVTLSLRGPYEKMFSIN-DSGHISIVDLSALNTS--TIQLVVVATDTGNPPRQASV 230
              RV+ SL      +F+++ ++G +S+  L     S  +  L V A D G+PPR ++ 
Sbjct: 838 VLGRVSFSLLSNPGTLFNLDSNTGALSLTKLIDYGNSARSYTLPVQAQDGGSPPRSSTA 896



 Score = 44.7 bits (104), Expect = 0.072,   Method: Compositional matrix adjust.
 Identities = 50/202 (24%), Positives = 93/202 (46%), Gaps = 12/202 (5%)

Query: 29  ATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKP---RDLRVKYWLSNDY 85
            ++IV+   ++  +  F+++ Y+ S  EN P    ++ +    P    +  + Y +    
Sbjct: 482 CSVIVNLTDSNDNDPYFNQSSYNASLFENSPSGSPVVQLLAQDPDIGENSLILYSILTPN 541

Query: 86  GERFSISRQGDISLMQCLDYETEDSYRFTVYATD-TLMTTSATVNISVVNVNDWDPRFRY 144
              F   R+G ++  + LD+E + SY F V ATD    + +ATV++S+ ++ND  P F  
Sbjct: 542 TPFFLDPRKGLVTNSRTLDHEVQSSYTFQVAATDGGGRSCNATVHVSLTDLNDNQPVFDP 601

Query: 145 PQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSL---RGPYEKMFSINDSGHISI 201
             Y +        +   G  I +++A D D            +G  +++FS++ SG I++
Sbjct: 602 SSYSVEY----FENTRIGQSICQLKAIDRDSPKFAITRFIIEQGNADEVFSVDGSGLITL 657

Query: 202 VDLSALNTSTIQLVVV-ATDTG 222
             L    T    L+ V A D G
Sbjct: 658 AKLLDRETQDNYLLTVKAVDGG 679



 Score = 42.7 bits (99), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 40/155 (25%), Positives = 71/155 (45%), Gaps = 16/155 (10%)

Query: 52   VSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGER-FSISR-QGDISLMQCLDYE 106
            V  LENLP+N  L  +     +   + R+ + +    G+  F I +  G ++     DYE
Sbjct: 2520 VQVLENLPLNSRLYEINATDRDSGANARLSFTVIGGTGQGLFLIDKFSGWLTTNITFDYE 2579

Query: 107  TEDSYRF--TVYATDTL---MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTP 161
                Y++  T+ ATD     ++++ T+ ++V + +++DP F    Y+  +P     +   
Sbjct: 2580 NTAVYQYSLTIKATDAGNPPLSSNITIIVNVADEDEYDPSFNRMDYKFDVP----GNAKI 2635

Query: 162  GSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSIN 194
            G  +G+V A D D GD  RV      P      +N
Sbjct: 2636 GDFVGQVTATDRDSGDQGRVFFVFYNPTSNALKMN 2670



 Score = 42.0 bits (97), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 56/187 (29%), Positives = 86/187 (45%), Gaps = 14/187 (7%)

Query: 52   VSALENLPVNYVLLTVTTNKPRDLRVKY-WLSNDYGERFSISR-QGDISLM--QCLDYET 107
            VS  EN  V   + TV      D +V Y  +S + G  F +    G IS+     LDYE+
Sbjct: 1970 VSIPENSKVGSYITTVRARASSDAQVTYSIISGNKGRAFYVDPFTGVISVASADALDYES 2029

Query: 108  EDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSV 164
              ++R  + AT      +     ++I+V++ ND  P F +P   L           P  V
Sbjct: 2030 TKNFRLHLVATPQGWVSLNGYMILDINVIDRNDNSPAF-HPSNMLAQLAEDTGAFKPRFV 2088

Query: 165  IGKVEAADGDKG--DRVTLSL-RGPYEKMFSINDS-GHISIVDL-SALNTSTIQLVVVAT 219
            + KV A D D G   +VT S+  G    +F+I+ + G I+   L     T++  LV+  T
Sbjct: 2089 V-KVTATDVDSGTNGKVTYSIWTGNEAGVFTIDSTTGEITTAKLLDRETTASFDLVIRGT 2147

Query: 220  DTGNPPR 226
            D+G PP+
Sbjct: 2148 DSGIPPK 2154



 Score = 42.0 bits (97), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 46/161 (28%), Positives = 73/161 (45%), Gaps = 16/161 (9%)

Query: 81   LSNDYGERFSISRQ-GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVN 136
            +S +    F+I R  G++S    LD ET+ SY+ +V A D      T  A + I + + N
Sbjct: 1685 MSGNTDGAFTIGRSTGELSTTTKLDRETKASYQLSVQAKDITPPYYTAFANITIFIEDQN 1744

Query: 137  DWDPRFRYPQYELFLPHIPLADLT-PGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSI 193
            D  P F+   Y        +++LT PG+ I  + A+D D G    +  +L      ++SI
Sbjct: 1745 DNPPVFQQSLYSS-----TISELTPPGTSILNLTASDKDSGSNGNIVYTLSNDTYGVYSI 1799

Query: 194  NDSGHISIVDLSALNTSTIQ---LVVVATDTGNPPRQASVP 231
            +    I +   +   TS  Q      +A D G  P+ A VP
Sbjct: 1800 DSRTGI-VYSAARFETSIKQEYNFFCIAKDQGQDPKMAIVP 1839



 Score = 42.0 bits (97), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 64/238 (26%), Positives = 103/238 (43%), Gaps = 22/238 (9%)

Query: 8   LQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTV 67
           L    L + A    N   +    L ++   T+  + +FS   YS +  EN+ V   +L V
Sbjct: 135 LDSYVLNISASDGGNPANHGFLRLSITVEDTNDNKPEFSNVSYSGTIPENIDVGTSILQV 194

Query: 68  TTNKPRDL----RVKYWLS--NDYGERFSIS-RQGDISLMQCLDYETEDSYRFTVYATDT 120
           + +  +D+     ++Y +   +D    F I    G I     LDYE + SY   V A D 
Sbjct: 195 SASD-KDIGTNAEIQYSIETHSDPQAIFGIHPTTGVIVNNVRLDYEAKRSYLIVVKAEDK 253

Query: 121 ----LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG 176
                +++SA V I V++VND +P   +  Y L   +    + T G+ + +V  +D D G
Sbjct: 254 GSSHQLSSSAIVRIEVLDVNDNNPVI-HVSYTLGGSYQVTENATIGTQVARVSVSDADSG 312

Query: 177 D--RVTLSLRGPYEKMFS-----INDSGHISI-VDLSALNTSTIQLVVVATDTGNPPR 226
               V ++L G  +  FS     +ND   I++   L         L  V  D G+PPR
Sbjct: 313 KNGEVNVTLEGG-DGYFSMKFDVLNDESIIAVGQSLDRETHDHFFLKAVCIDKGDPPR 369



 Score = 41.6 bits (96), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 33/108 (30%), Positives = 53/108 (49%), Gaps = 8/108 (7%)

Query: 80   WLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDTLM---TTSATVNISVVNVN 136
            W  N+ G     S  G+I+  + LD ET  S+   +  TD+ +   +T+  V + V ++N
Sbjct: 2109 WTGNEAGVFTIDSTTGEITTAKLLDRETTASFDLVIRGTDSGIPPKSTNCQVKVVVTDLN 2168

Query: 137  DWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR 184
            D  P F  P  E+ +      D   G+V+  V A D DK  R+T +L+
Sbjct: 2169 DNPPLFD-PLSEVNIRE----DTRTGAVVTSVVATDTDKESRLTYNLK 2211


>gi|156368055|ref|XP_001627512.1| predicted protein [Nematostella vectensis]
 gi|156214424|gb|EDO35412.1| predicted protein [Nematostella vectensis]
          Length = 1677

 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 62/231 (26%), Positives = 117/231 (50%), Gaps = 25/231 (10%)

Query: 13   LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKP 72
            LVV+A    N + Y+ A + ++   ++ +   F +++Y+V+  E+  +  +++ +  +  
Sbjct: 1232 LVVKATDASNANLYSTAKIEITVGDSNDQRPVFPESDYTVNITEDALIGSLVINLNASDK 1291

Query: 73   ---RDLRVKYWLSN-DYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATD-TLMTTSA 126
               ++  +KY +SN +    F + S  G + + + LD+ET   Y  T+ A D  L+  S+
Sbjct: 1292 DIGQNGLIKYSISNGNLAAMFDVESATGRLIVAKSLDFETTQLYELTITAQDHGLIPLSS 1351

Query: 127  TVNIS--VVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSL- 183
            TVN++  V++VND  P F      L +      ++  G  +G+  A+D D G    ++  
Sbjct: 1352 TVNVTVNVLDVNDNAPLFPTQPVTLTVRE----NVNTGFPVGRCTASDRDTGTNAHIAFS 1407

Query: 184  ---RGPYEKMFSINDSGHISIVDLSALNTSTI-------QLVVVATDTGNP 224
               + P  K FS+N S    I  ++A++  T+       QLVV+ATD G+P
Sbjct: 1408 MYSQTP-SKTFSVN-SATCEITTIAAIDLETMPAGRDSFQLVVMATDQGSP 1456



 Score = 41.2 bits (95), Expect = 0.88,   Method: Compositional matrix adjust.
 Identities = 53/199 (26%), Positives = 86/199 (43%), Gaps = 17/199 (8%)

Query: 45   FSKNEYSVSALE-NLPVNYVLLTVTTNKPRDLRVKYWLSNDYG---ERFSI-SRQGDISL 99
            FS+  Y+++  E +LP + V      +       K++ S   G   ++F I S  G++ L
Sbjct: 1159 FSRAVYAITVSELSLPGSPVFRIKAMDADEGDNAKFFYSLVSGTGMDKFFINSSTGELHL 1218

Query: 100  MQCLDYETEDSYRFTVYATDTL---MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
             + LD ET  SY   V ATD     + ++A + I+V + ND  P F    Y + +     
Sbjct: 1219 SKTLDRETTSSYNLVVKATDASNANLYSTAKIEITVGDSNDQRPVFPESDYTVNITE--- 1275

Query: 157  ADLTPGSVIGKVEAADGDKGDRVTLSL---RGPYEKMFSINDSGHISIV--DLSALNTST 211
             D   GS++  + A+D D G    +      G    MF +  +    IV   L    T  
Sbjct: 1276 -DALIGSLVINLNASDKDIGQNGLIKYSISNGNLAAMFDVESATGRLIVAKSLDFETTQL 1334

Query: 212  IQLVVVATDTGNPPRQASV 230
             +L + A D G  P  ++V
Sbjct: 1335 YELTITAQDHGLIPLSSTV 1353



 Score = 40.4 bits (93), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 57/229 (24%), Positives = 105/229 (45%), Gaps = 22/229 (9%)

Query: 11  ITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTT- 69
           +T+ + A  + +  +    T+ V+    +  + +F K+ Y  +  E   +   +L V+  
Sbjct: 496 VTITITAQDHGSAPKTGSTTVTVTIIDGNDNKPRFMKSSYKGTISEGASIGATVLQVSAT 555

Query: 70  --NKPRDLRVKYWLSNDYGE---RFSISRQ-GDISLMQCLDYETEDSYRFTVYATDT--- 120
             +   + R+ Y +S+   +    F ++ Q G +     LD ET+  Y FTV A D    
Sbjct: 556 DVDSGDNGRITYEISSSDAQVNGLFELNTQTGVLWTKSQLDRETKSLYSFTVLAKDHGDP 615

Query: 121 LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVT 180
            + +S  V +++ ++ND  P F YP  E F     + +  PG ++ +V A D D+G    
Sbjct: 616 QLMSSVKVELTISDINDNAPVF-YP-VEYFAS--IMENEPPGKLL-QVTATDADEGTNAV 670

Query: 181 LS---LRGPYEKMFSINDSGHISIVDLSALNTST---IQLVVVATDTGN 223
           +S   + G     FSI+ S  + I  L++L+        L++ A D GN
Sbjct: 671 ISYDIIGGNNNGNFSIDSSTGV-ISTLASLDHEVEEFFSLIISAKDGGN 718



 Score = 40.0 bits (92), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 34/109 (31%), Positives = 54/109 (49%), Gaps = 10/109 (9%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGERFSI----SRQGDI 97
           F++N Y  S  EN      +L V+    +   +  +KY +  D  +  SI    S  G I
Sbjct: 206 FTQNSYLGSIAENTKPGVSILRVSAADRDSGSNGDIKYAIDWDAIQSNSIFDLDSSTGVI 265

Query: 98  SLMQCLDYETEDSYRFTVYATDTLMTTS---ATVNISVVNVNDWDPRFR 143
              Q LD+E ++SY F V A+D  + +    ATV I+V++ ND  P+ +
Sbjct: 266 RTKQNLDFEVKNSYTFNVIASDGGVPSKNDLATVTINVLDTNDNSPQLK 314



 Score = 38.9 bits (89), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 60/224 (26%), Positives = 100/224 (44%), Gaps = 20/224 (8%)

Query: 21  DNQDRYALATLIVSKAGTSLRELQ----FSKNEYSVSALENLPVNYVLLTV-TTNKPRDL 75
           D  ++YA  T +V+   T L +      F    Y+ +  EN+P   ++  V  T K ++ 
Sbjct: 715 DGGNKYAAKTAVVNV--TVLNKADNLPVFLYEMYNFTVYENVPKGTLVGRVYATTKDKNG 772

Query: 76  RVKYWL-SNDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYA---TDTLMTTSATVNI 130
            + Y + S D    F + S  G I +   +D E +  Y   V A   T   ++  ATVNI
Sbjct: 773 SISYAIVSGDPTNLFLVDSTGGIIKINGDMDREEKAQYLLAVIARVGTVKPLSAQATVNI 832

Query: 131 SVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDR--VTLSLRGPYE 188
            V++ ND  P+F      + +    L     G V+    A D D G    V   L    E
Sbjct: 833 EVLDRNDNAPQFSTSSVIVDIDGTWLV----GQVVYNAAAVDLDAGKNGLVRYQLTSNAE 888

Query: 189 KMFSIND-SGHISIV-DLSALNTSTIQLVVVATDTGNPPRQASV 230
            +  IN  SG I +   L+  + +   + V+A+D+G+PP+ +++
Sbjct: 889 GLLWINSTSGVIKLARKLTDGDETQYTVQVLASDSGSPPQHSTM 932



 Score = 38.1 bits (87), Expect = 8.2,   Method: Compositional matrix adjust.
 Identities = 40/150 (26%), Positives = 67/150 (44%), Gaps = 20/150 (13%)

Query: 89   FSI-SRQGDISLMQCLDYET----EDSYRFTVYATDT---LMTTSATVNISVVNVNDWDP 140
            FS+ S   +I+ +  +D ET     DS++  V ATD     ++T  ++ + V + ND  P
Sbjct: 1417 FSVNSATCEITTIAAIDLETMPAGRDSFQLVVMATDQGSPKLSTRKSITVQVTDENDNSP 1476

Query: 141  RFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSINDS-G 197
             F  P         P A       +  + A D D+    +VT S+       F+++ S G
Sbjct: 1477 GFVSP---------PAAAAGSSLNVMTITAEDPDRNSNGKVTYSIISGNNGYFNLHPSTG 1527

Query: 198  HISIVDLSALNTSTIQLVVVATDTGNPPRQ 227
             + ++     N +  QL + A+D G P RQ
Sbjct: 1528 QLQMIHQIPDNPTIYQLTIQASDGGQPSRQ 1557


>gi|336244963|gb|AEI28399.1| FAT tumor suppressor-like protein 4, partial [Anas platyrhynchos]
          Length = 254

 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 52/186 (27%), Positives = 93/186 (50%), Gaps = 10/186 (5%)

Query: 45  FSKNEYSVSALENLPVNYVLLTV-TTNKPRDLRVKYWLS-NDYGERFSISRQ-GDISLMQ 101
           FS+  YS    EN+ + Y + TV  +    +  + Y ++  D    F+I+R  G I+   
Sbjct: 4   FSQGMYSFVVFENVALGYHVGTVFASTMDLNTNISYLITTGDQRGMFAINRATGQITTAS 63

Query: 102 CLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTP 161
            +D E +  Y+  V A+   +T    VNI+V ++ND  P F +    + +    + +   
Sbjct: 64  IIDREEQAFYQLKVVASGGAITGDTLVNITVKDLNDNSPHFIHAVESVNV----VENWKA 119

Query: 162 GSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIND-SGHISIVDLSALNTSTIQLVVVA 218
           G  I + +A D D+G    V  SL+   + +FSIN+ +G IS++    +N  + Q+ ++A
Sbjct: 120 GHTIFQAKALDPDEGVNGMVLYSLKQNPKGLFSINEQTGAISLIGPLDINAGSYQVEILA 179

Query: 219 TDTGNP 224
           +D G P
Sbjct: 180 SDMGVP 185


>gi|348582912|ref|XP_003477220.1| PREDICTED: protocadherin gamma-A2-like [Cavia porcellus]
          Length = 824

 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 56/193 (29%), Positives = 87/193 (45%), Gaps = 17/193 (8%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVT---TNKPRDLRVKYWLSNDYGERFSI----SRQGDI 97
           F++ EY VS  EN+PV   +LTVT    ++  + +V Y      GE   +    S  GDI
Sbjct: 242 FTQPEYRVSVPENMPVGTRVLTVTATDADEGYNAQVAYIREKPLGETSEVFELKSTSGDI 301

Query: 98  SLMQCLDYETEDSYRFTVYATDTL-MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
           ++++ LDYE    +   + A D   + T   V ++V++VND  P F        +P    
Sbjct: 302 TIIKSLDYEDAKFHEIDIEAQDGPGLLTRTKVVVTVLDVNDNAPEFYMTSATSSVPE--- 358

Query: 157 ADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDS--GHISIVDLSALNT---ST 211
            D  PG++I      D D G    ++   P +  F +  S   +  +V   AL+    S 
Sbjct: 359 -DSPPGTIIALFNVHDRDSGQNAFITCFLPEKLPFKLERSVDSYYRLVTTGALDREQFSF 417

Query: 212 IQLVVVATDTGNP 224
             + V A D GNP
Sbjct: 418 YNITVTAEDGGNP 430



 Score = 41.2 bits (95), Expect = 0.77,   Method: Compositional matrix adjust.
 Identities = 65/274 (23%), Positives = 114/274 (41%), Gaps = 45/274 (16%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPR---DLRVKYWLSNDYGERFSISR-------Q 94
           FS+  YS    EN P    + +V  + P    +  V Y L+    +   +S         
Sbjct: 452 FSRAFYSAFIPENNPRGASIFSVLAHDPDSDDNAHVTYSLAEGTLQGAPLSSYISINSDT 511

Query: 95  GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFL 151
           G +  ++  DYE     +  V A D+    ++++ ++++ +V+ ND  P   YP     L
Sbjct: 512 GVLYALRSFDYEQFQDLQLQVIALDSGKPPLSSNVSLSLFLVDQNDNAPEILYPT----L 567

Query: 152 P-----HIPLADLT--PGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-DSGHI- 199
           P      + LA  +  PG ++ KV A D D G    LS   L+     +F +   +G + 
Sbjct: 568 PTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYRLLKASEPGLFLVGLHTGEVR 627

Query: 200 ---SIVDLSALNTSTIQLVVVATDTGNPPRQASVPAIM----HFPEAIVQQASSKLNSGT 252
              +++D  AL  S   L+V   D G PP  A+V   +      P+ +    S +  +  
Sbjct: 628 TARTLLDKDALKQS---LIVAVQDHGQPPLSATVTITIAVADSIPDVLADLGSIRTPTDP 684

Query: 253 SSTVLII------LGVVLIVLGFVIILLILYIHK 280
             + L +        V  + L FVI+LL+  + +
Sbjct: 685 DDSDLTLYLVVAVAAVSCVFLAFVIVLLVFRLRR 718



 Score = 41.2 bits (95), Expect = 0.96,   Method: Compositional matrix adjust.
 Identities = 45/142 (31%), Positives = 62/142 (43%), Gaps = 17/142 (11%)

Query: 102 CLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLAD 158
            LD E    Y  TV A D     ++T A V + V ++ND  P F    Y  F+P     +
Sbjct: 409 ALDREQFSFYNITVTAEDGGNPSLSTDAHVFLQVTDINDNPPAFSRAFYSAFIPE----N 464

Query: 159 LTPGSVIGKVEAADGDKGD--RVTLSLR------GPYEKMFSIN-DSGHI-SIVDLSALN 208
              G+ I  V A D D  D   VT SL        P     SIN D+G + ++       
Sbjct: 465 NPRGASIFSVLAHDPDSDDNAHVTYSLAEGTLQGAPLSSYISINSDTGVLYALRSFDYEQ 524

Query: 209 TSTIQLVVVATDTGNPPRQASV 230
              +QL V+A D+G PP  ++V
Sbjct: 525 FQDLQLQVIALDSGKPPLSSNV 546


>gi|417301219|ref|ZP_12088385.1| protein containing Cadherin domains [Rhodopirellula baltica WH47]
 gi|327542489|gb|EGF28967.1| protein containing Cadherin domains [Rhodopirellula baltica WH47]
          Length = 760

 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 39/92 (42%), Positives = 54/92 (58%), Gaps = 3/92 (3%)

Query: 48  NEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYG-ERFSI-SRQGDISLMQCLDY 105
           N+ +    EN PVN V+ TVT + P D  V Y ++   G +RF I +  G I +   LD+
Sbjct: 231 NDATFIVAENAPVNGVVGTVTASDP-DSTVTYSITAGNGADRFEINAANGQIKVKNLLDF 289

Query: 106 ETEDSYRFTVYATDTLMTTSATVNISVVNVND 137
           E  ++Y  TV A+D  +T +ATVNI V NVND
Sbjct: 290 EIANAYSLTVQASDGTLTDTATVNIVVTNVND 321


>gi|47225228|emb|CAG09728.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 1210

 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 48/155 (30%), Positives = 76/155 (49%), Gaps = 13/155 (8%)

Query: 79  YWLSNDYGERFSISRQ-GDISLMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVN 134
           Y L  D  E F++ R+ G +S+ + LD E +D Y FTV A D   T + ++ TV + V +
Sbjct: 473 YTLGPDAPEGFNVDRRSGVLSVGKRLDREKQDRYAFTVIAKDNGSTSLQSNVTVKLIVQD 532

Query: 135 VNDWDPRFRYPQYELFLP-HIPLADLTPGSVIGKVEAADGDKGDR--VTLSLRGPYEKMF 191
           +ND  P F +P+Y  ++P ++PL        +G +   D D G+   VTLS+    +   
Sbjct: 533 LNDNSPAFTHPEYNFYVPENLPLF-----GTVGLITVTDADSGENAVVTLSILNGKDNFI 587

Query: 192 SINDSGHISI-VDLSALNTSTIQLVVVATDTGNPP 225
               +G I   +       S+   +V A D G PP
Sbjct: 588 IDPQTGVIKPNITFDREQQSSYTFMVKAVDGGQPP 622



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 71/252 (28%), Positives = 102/252 (40%), Gaps = 50/252 (19%)

Query: 14  VVRAIQYDNQDRYALATLIVSKAGTSLR---------------ELQFSKNEYSVSALENL 58
           V + +  + QDRYA   +      TSL+                  F+  EY+    ENL
Sbjct: 494 VGKRLDREKQDRYAFTVIAKDNGSTSLQSNVTVKLIVQDLNDNSPAFTHPEYNFYVPENL 553

Query: 59  PV--NYVLLTVTTNKPRDLRVKYWLSNDYGERFSISRQ-GDISLMQCLDYETEDSYRFTV 115
           P+     L+TVT     +  V      +  + F I  Q G I      D E + SY F V
Sbjct: 554 PLFGTVGLITVTDADSGENAVVTLSILNGKDNFIIDPQTGVIKPNITFDREQQSSYTFMV 613

Query: 116 YATDTLMTTS---ATVNISVVNVNDWDPRFRYP----QYELFLPHIPLADLTPGSVIGKV 168
            A D     S   A V I+VV+VND  P F  P     Y+L        + +PG+V+ +V
Sbjct: 614 KAVDGGQPPSSSYAKVTINVVDVNDNRPVFVIPSSNYSYDLV-----RTNASPGAVVTRV 668

Query: 169 EAADGDKGDRVTLSL--------------RGPYEKMFSINDS-GHISIVD-LSALNTSTI 212
            A D D G    L                RG    +F+I+ S G+I++ + + A +    
Sbjct: 669 YAIDNDTGMNAELQYSIISSIIITSRVSPRG----LFAIDKSTGNITLQEKIVAADQGLH 724

Query: 213 QLVVVATDTGNP 224
           +LVV   D G P
Sbjct: 725 RLVVKVRDLGQP 736



 Score = 40.0 bits (92), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 57/127 (44%), Gaps = 12/127 (9%)

Query: 56  ENLPVN-YVLLTVTTNKPRDLRVKYWLSNDYGERFSI----SRQGDISLMQCLDYETEDS 110
           EN P+N  + L   T+K  DL  K     D+   F +    + Q  +     LDYET   
Sbjct: 342 ENAPLNTKIALITVTDKDADLYGKVACYTDHDVPFRLKPVFNDQFLLETAAPLDYETTRE 401

Query: 111 YRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGK 167
           Y   + A+D     + TSA V I + + ND  P F  P+ +L +P     +  P + + K
Sbjct: 402 YAIKIVASDRGTPPLNTSAMVLIKIKDENDNVPIFPQPEIQLSIPE----NNDPSTQLIK 457

Query: 168 VEAADGD 174
           + A D D
Sbjct: 458 LSATDAD 464


>gi|350594501|ref|XP_003134187.2| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 2 [Sus scrofa]
          Length = 3938

 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 72/148 (48%), Gaps = 12/148 (8%)

Query: 43   LQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGER---FSISR-QGDIS 98
            L F ++ YS + +E  PVN+++  ++      L   +W S   G++   F I +  G I 
Sbjct: 1346 LAFDESHYSFTVMETDPVNHMVGVISVEGRPGL---FWFSISGGDKDMDFDIEKTMGSIV 1402

Query: 99   LMQCLDYETEDSYRFTVYATDTLMTTSATVNISVV-NVNDWDPRFRYPQYELFLPHIPLA 157
            + + LD     SY  TV  TD   T +  V I ++ NVN   P+F    YE+ +P     
Sbjct: 1403 IAKPLDTRRRSSYNLTVEVTDGSHTIATQVYIFMIANVNHHRPQFLEASYEVRVPQ---- 1458

Query: 158  DLTPGSVIGKVEAADGDKGDRVTLSLRG 185
            D  PG  + +V+A D DKG  +  ++ G
Sbjct: 1459 DTLPGVELLRVQATDQDKGKGLIYTIHG 1486



 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 59/199 (29%), Positives = 97/199 (48%), Gaps = 26/199 (13%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWL-------SNDYGERFSISRQ-G 95
            +FS+  Y+ SA E+LP    + +V     +D  V Y L       SN YG  FS+ +  G
Sbjct: 2635 KFSEPLYTFSASEDLPEGSEIGSVKAVAAQD-PVIYSLVQGTTPESNKYG-IFSLDQNTG 2692

Query: 96   DISLMQCLDYETEDSYRFTVYA----TDTLMTTSATVNISVVNVNDWDPRFRYPQYELFL 151
             + + + +DYE+   Y+  + A     DT + +  +VNI V +VND  P F    Y+  L
Sbjct: 2693 VLKVRKAMDYESTKWYQIDLMAHCPHNDTYLGSLVSVNIQVKDVNDNRPIFEADPYKAVL 2752

Query: 152  PHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYE------KMFSIN-DSGHISIVDL 204
                  ++  G+ + +V A D D G+   +S R P +      ++F+I+ ++G I+ +  
Sbjct: 2753 TE----NMPVGTSVIQVTANDQDTGNDGHVSYRLPVDPGSNIHELFAIDSETGWITTLQE 2808

Query: 205  SALNTSTI-QLVVVATDTG 222
                TS I +  VVA D G
Sbjct: 2809 LDCETSQIYRFYVVAHDHG 2827



 Score = 48.1 bits (113), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 63/260 (24%), Positives = 110/260 (42%), Gaps = 40/260 (15%)

Query: 11   ITLVVRAIQYDNQDRYALATLIVSKAGTSLREL---------------QFSKNEYSVSAL 55
            I  V +++ ++   +Y L+     K  +SL ++               +FS++ YS    
Sbjct: 3218 ILYVNKSLDFETSPKYFLSIECSRKGSSSLSDMTTIVVNVTDINEHRPRFSQDLYSTRVS 3277

Query: 56   ENLPVNYVLLTVTT---NKPRDLRVKYWL--SNDYGERFSISRQGDISLMQCLDYETEDS 110
            EN  V  ++LTV+    + P +  + Y L   N  G      ++G++ + + LD+E   S
Sbjct: 3278 ENAIVGDLVLTVSATDEDGPLNSAITYSLVGGNQLGHFAIHPKKGELQVAKTLDWEQISS 3337

Query: 111  YRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTP-GSVIG 166
            Y   + ATD     +     V I VV+VND  PRF    Y        + + +P GS + 
Sbjct: 3338 YSLRLRATDNGQPPLHEDTDVAIQVVDVNDNPPRFFQLNYS-----TSVQENSPTGSKVL 3392

Query: 167  KVEAADGDKGD-------RVTLSLRGPYEKMFSINDSGHISIVD-LSALNTSTIQLVVVA 218
            ++  +D D  +       R+T   +G     F +   G +   + LS       QL +  
Sbjct: 3393 QLILSDPDSPENGPPYSFRIT---QGNDGSAFQVTPDGWLVTTEGLSKRVQEWYQLQIEV 3449

Query: 219  TDTGNPPRQASVPAIMHFPE 238
            +D+G PP  +S    +H  E
Sbjct: 3450 SDSGTPPLSSSTSVRVHVRE 3469



 Score = 48.1 bits (113), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 49/143 (34%), Positives = 74/143 (51%), Gaps = 11/143 (7%)

Query: 95   GDISLMQCLDYETEDSYRFTVYATD----TLMTTSATVNISVVNVNDWDPRFRYPQYELF 150
            G +S  + LD E +D +   V   D    TL +TS  V + +++VND  P F +  + + 
Sbjct: 1191 GLLSTARQLDRENKDEHILEVTVLDNGEPTLRSTSRVV-VRILDVNDNPPVFSHKLFNVR 1249

Query: 151  LPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIND-SGHISIVDLSAL 207
            LP   L  +TPG V  ++ A+D D+G   RVT S+    E+ FSI+  +G +S       
Sbjct: 1250 LPE-RLNPVTPGPVY-RLVASDLDEGLNGRVTYSIEESDEEGFSIDPVTGVVSSSSTFTA 1307

Query: 208  NTSTIQLVVVATDTGNPPRQASV 230
                I L + ATD+G PP  A+V
Sbjct: 1308 GEYNI-LTIKATDSGQPPLSATV 1329



 Score = 44.7 bits (104), Expect = 0.068,   Method: Compositional matrix adjust.
 Identities = 55/192 (28%), Positives = 82/192 (42%), Gaps = 15/192 (7%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGERFSIS--RQGDISLMQC 102
            F    Y V   EN+ +   +L      P  LR+ Y +  +       +  + G +++   
Sbjct: 2115 FQSPYYKVRVPENITLYTPILHTQARSPEGLRLIYNIVEEEPLMLFTTDFKTGVLTVTGP 2174

Query: 103  LDYETEDSYRFTVYATDTLMT--TSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLT 160
            LDYE++  + FTV ATDT +   + ATV + V +VND  P F    Y   +    L   T
Sbjct: 2175 LDYESKTKHVFTVRATDTALGSFSEATVEVLVEDVNDNPPTFSQLVYTTSVSE-GLPAQT 2233

Query: 161  PGSVIGKVEAADGDKGDRVTLSLR-----GPYEKMFSINDS-GHISIV-DLSALNTSTIQ 213
            P   +  + A+D D G    +S           K F IN S G +S V +L         
Sbjct: 2234 P---VIHLLASDQDSGQNRDISYHIVEDGSDVSKFFQINGSTGEMSTVQELDYEAQQHFH 2290

Query: 214  LVVVATDTGNPP 225
            + V A D G+PP
Sbjct: 2291 VKVRAMDRGDPP 2302



 Score = 43.1 bits (100), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 47/151 (31%), Positives = 65/151 (43%), Gaps = 13/151 (8%)

Query: 88   RFSISRQGD---ISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRY 144
            +F IS+ GD   I   + LD E    Y   V A+D     S  V I V+++ND  P+   
Sbjct: 2900 QFGISQVGDEWRIFARKTLDREHMAKYLLRVTASDGKFQASVLVEIFVLDLNDNSPQCS- 2958

Query: 145  PQYELFLPHIPLADLTPGSVIGKVEAA--DGDKGDRVTLSLRGPYEKMFSINDSGHISIV 202
               +L        D+  G  I K+ A   D D   ++T SL GP    F + D     ++
Sbjct: 2959 ---QLLYTGKVSEDVPLGHFILKISATDLDSDTNAQITYSLHGPGADDFKL-DPHTGELI 3014

Query: 203  DLSALNTS---TIQLVVVATDTGNPPRQASV 230
             L+AL+        LV  ATD G    QA V
Sbjct: 3015 TLTALDREKKDVYSLVAKATDGGGQSCQADV 3045



 Score = 43.1 bits (100), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 56/202 (27%), Positives = 91/202 (45%), Gaps = 24/202 (11%)

Query: 38  TSLRELQFSKNEYSVSALENLP--VNYVLLTVTTNKPRDLRVKYWLS-NDYGERFSI-SR 93
           + L  L+F +  Y V   E  P  V  V++ VT        +KY L  +  G  F + +R
Sbjct: 354 SKLASLKFEQAIYRVQLSECSPPGVRVVMVKVTQALAN---LKYVLKPSSEGAGFKLNAR 410

Query: 94  QGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYE-LFLP 152
            G I+  + +D+     Y+  +  + +L +T  TV I +++ N+  P F    YE  F  
Sbjct: 411 TGLITTTKLVDFHDRAHYQLEIRTSPSLAST--TVVIDIMDCNNHAPMFSKSSYESTFDE 468

Query: 153 HIPLADLTPGSVIGKVEAADGDKGDR--VTLSLRGPYEKMFSINDSGHISIVDLSA---- 206
           +IP     PG+ +  + A D D G+   VT S+  P    FSI+   ++ I+  S     
Sbjct: 469 NIP-----PGTSVLTITATDKDHGENGYVTYSITRPNAVPFSIDP--YLGIISTSKPMDY 521

Query: 207 -LNTSTIQLVVVATDTGNPPRQ 227
            L        V A+D G+P R+
Sbjct: 522 ELMNRIYTFRVRASDWGSPFRR 543



 Score = 41.6 bits (96), Expect = 0.63,   Method: Compositional matrix adjust.
 Identities = 66/228 (28%), Positives = 93/228 (40%), Gaps = 25/228 (10%)

Query: 13   LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENL--PVNYVLLTVTTN 70
            L +RA     QD   +   +     TSL   QF ++ Y  +  ENL      V+L    N
Sbjct: 1883 LTIRASDGLYQDTALVKISLTQALNTSL---QFDRDVYRATVRENLLDRKALVILGAQGN 1939

Query: 71   KPRDLRVKYWLSNDYGERFSISRQGDISLMQC-LDYETEDSYRFTVYATDTLM---TTSA 126
               D  + Y+L N       +   G +       D E +D++   V   D         A
Sbjct: 1940 HLNDT-LSYFLLNGTDMFHMVKSAGVLQTRGVGFDREQQDTHEVAVELRDNRTPQRVAQA 1998

Query: 127  TVNISVVNVNDWDPRFRYPQYELFLPHIPLADLT-PGSVIGKVEAADGDKG--DRVTLSL 183
             V +S+ +VND  P F++  Y     H  + D T PG V+ +V A D D G    +T +L
Sbjct: 1999 LVRVSIEDVNDNCPEFKHLPY-----HTIIQDGTEPGDVLFQVSATDQDLGVNGAITYAL 2053

Query: 184  RGPYEKMFSINDS-GHISI---VDLSALNTSTIQLVVVATDTGNPPRQ 227
               Y   F I+   G IS+    D  ALN     L V+A D G P  Q
Sbjct: 2054 AEDY-IYFRIDPYLGDISLKKPFDYQALN--KYHLKVIARDGGTPSLQ 2098



 Score = 39.7 bits (91), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 35/132 (26%), Positives = 59/132 (44%), Gaps = 1/132 (0%)

Query: 12   TLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNK 71
            TL V+A    +  R+ LAT+I+    +      FS  EY V   E++PV   +L ++   
Sbjct: 1571 TLTVKAEDQGSPQRHDLATVIIHVYPSDSSAPVFSNTEYFVEIPESIPVGSPVLLISAMS 1630

Query: 72   PRDLRVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDTLMT-TSATVNI 130
              ++  +    N  G     S  G IS  + LD+E   SY+  +  ++     T   V +
Sbjct: 1631 SSEVTYELREGNKNGVFSMNSYSGLISTQKNLDHEKISSYQLKIRGSNMAGAFTDVMVLV 1690

Query: 131  SVVNVNDWDPRF 142
             +++ ND  P F
Sbjct: 1691 YIIDENDNAPMF 1702



 Score = 39.7 bits (91), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 41/154 (26%), Positives = 71/154 (46%), Gaps = 15/154 (9%)

Query: 51  SVSALENLPVNYVLLTVTTNKPR---DLRVKYWLSNDYGER-FSISRQ-GDISLMQCLDY 105
           S+  LE+ P+N  L  +    P    + ++ Y +++   E  F I  + G +++   LDY
Sbjct: 720 SIDILESAPLNTPLARLAATDPDAGFNGKLVYVIADGNEEGCFDIGLESGLLTIASPLDY 779

Query: 106 ETEDSYRFTVYATDTLMTTSATVNISVVNVNDWD---PRFRYPQYELFLPHIPLADLTPG 162
           E    Y   V   D      ++  +  VNV DW+   PRF    Y++ +      D   G
Sbjct: 780 EATSFYILNVTVYDLGTPQKSSWKVLTVNVEDWNDNAPRFPPGGYQVTVSE----DTEVG 835

Query: 163 SVIGKVEAADGDKGD--RVTLSLRGPYEKMFSIN 194
           + + +++A D D  D  RV  +L  P E+ FS++
Sbjct: 836 TTVAQLKAKDADSEDNGRVRYTLLSPTEE-FSLH 868



 Score = 38.9 bits (89), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 52/185 (28%), Positives = 86/185 (46%), Gaps = 19/185 (10%)

Query: 56   ENLPVNYVLLTVTTNKPRDL----RVKYWLSNDYGERFSIS-RQGDISLMQCLDYETEDS 110
            E+LP   +L  +  + P DL     V+Y L +D    F ++   G +SL + LD+E    
Sbjct: 935  EDLPPGTILTFLDASDP-DLGPAGEVQYVLLDDAHGTFHVNPMTGALSLERELDFERRAG 993

Query: 111  YRFTVYATDT----LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTP-GSVI 165
            Y  +++A+D+       T   V + V++VN+       P++  F+    + + +P G+ +
Sbjct: 994  YNLSLWASDSGRPIARRTLCHVEVIVLDVNE---NLHPPRFASFVHQGQVQENSPSGTSV 1050

Query: 166  GKVEAADGDKG--DRVTLSLR-GPYEKMFSIN-DSGHI-SIVDLSALNTSTIQLVVVATD 220
              V A D D G    +   LR G     FSI+ D+G I ++  L     S   L V A D
Sbjct: 1051 TVVAAQDDDSGLDGELQYFLRAGTSLSAFSIHQDTGMIQTVAPLDREFMSCYWLTVQAVD 1110

Query: 221  TGNPP 225
             G+ P
Sbjct: 1111 RGSVP 1115



 Score = 38.1 bits (87), Expect = 7.2,   Method: Compositional matrix adjust.
 Identities = 39/133 (29%), Positives = 67/133 (50%), Gaps = 14/133 (10%)

Query: 95   GDISLMQCLDYETEDSYRFTVYATDT-----LMTTSATVNISVVNVNDWDPRFRYPQYEL 149
            G ++++  +DYE   S RF++Y  D          +A V I++ NVND  PRF    YE 
Sbjct: 1764 GTLTVILEMDYENMPSLRFSIYVHDQGSPILFAPRAAQVIINIRNVNDCPPRFSDQIYEA 1823

Query: 150  FLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSIND-SGHISIVDLSAL 207
             +    L  +  G  +  V A+D D    V  S++ G  ++  +I+  +G IS+++ + L
Sbjct: 1824 AV----LQPIHRGMELLMVWASDDDS--EVNYSIKSGNADEAVAIHPVTGRISVLNPAFL 1877

Query: 208  NTSTIQLVVVATD 220
              S  +L + A+D
Sbjct: 1878 GLSR-ELTIRASD 1889


>gi|47216301|emb|CAF96597.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 2244

 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 63/203 (31%), Positives = 99/203 (48%), Gaps = 27/203 (13%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSN-DYGERFSIS-RQGDISLMQC 102
            F K  Y++   EN+ ++  +L V  N     R+ Y +S  D  ++FSI    G I ++Q 
Sbjct: 936  FEKAFYTIEIPENIQLHTPVLHVQANNSEGPRIVYTISEGDPFKQFSIDFNTGVIHVIQP 995

Query: 103  LDYETEDSYRFTVYATDTLMTTSATVNISVV--NVNDWDPRFRYPQYELFLPHIPLADLT 160
            LD+ET  +Y+ +V ATD+L    + V + ++  +VND  P F    Y         A+++
Sbjct: 996  LDFETHPAYKLSVRATDSLTGAHSDVFVDIILEDVNDNAPVFLSKAYH--------ANVS 1047

Query: 161  PGSVIG----KVEAADGDKGD--RVTLSL---RGPYEKMFSIN-DSGHISIVDLSALNTS 210
              SV+G    +V+A D D G+   V   L   +G     F+I+ D+G IS   L  L+  
Sbjct: 1048 EASVVGTRILQVDAKDSDTGNNQEVFFQLVEEKGESSDFFTIDRDTGTISTAQL--LDYE 1105

Query: 211  TI---QLVVVATDTGNPPRQASV 230
             I   +L V A D G P   + V
Sbjct: 1106 EIRQHELRVRAVDRGVPALSSEV 1128



 Score = 54.7 bits (130), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 53/219 (24%), Positives = 101/219 (46%), Gaps = 24/219 (10%)

Query: 29   ATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDL------RVKYWLS 82
            A ++V+  G +     FS+ E+ V  +E+   + +   V   K  D       +++Y + 
Sbjct: 1230 AAVLVTVIGANFHSPTFSQTEFVVELVEH---SEIYTPVAEAKATDADEGIYGQIRYQIV 1286

Query: 83   NDYG-ERFSISRQGDISLMQCLDYET--EDSYRFTVYATDTLMTTS-ATVNISVVNVNDW 138
            ND+  ++FS++  G+I  ++ LD E   E     ++ A D         VN+ + ++ND 
Sbjct: 1287 NDFAKDKFSVNENGEIFTLESLDRENNMEKVVPISLVARDGGGKVGFCVVNVILTDINDN 1346

Query: 139  DPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDR--VTLSLRGPYEKM---FSI 193
             P+FR   Y+  +     +D+  G+ + ++ A+D D+G    +  S+    E +   F I
Sbjct: 1347 APQFRAADYKSTIA----SDVPRGTSVVRISASDLDEGSNADIEYSIEADVENVEENFEI 1402

Query: 194  NDSGHISIV--DLSALNTSTIQLVVVATDTGNPPRQASV 230
            + +  + +    L  L        V A DTGNPP+ + V
Sbjct: 1403 HPTSGLIVTKESLIGLENELYAFFVRAKDTGNPPQHSVV 1441



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 41/113 (36%), Positives = 56/113 (49%), Gaps = 12/113 (10%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLS------NDYGERFSIS-RQGDI 97
            F   EY+ +  E++ V   LL V     RD      +S      N++G  FS+  R GDI
Sbjct: 1985 FEHREYTATVSEDVSVGTQLLRVQA-ASRDTEANGEISYGIISGNEHG-LFSVDPRTGDI 2042

Query: 98   SLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQY 147
             ++Q LDYE    Y  TV ATD     ++  ATVNI++ +VND  P F    Y
Sbjct: 2043 FVIQPLDYEASHEYYITVEATDGGSPPLSDMATVNINLTDVNDNRPVFSQDVY 2095



 Score = 47.4 bits (111), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 53/208 (25%), Positives = 98/208 (47%), Gaps = 30/208 (14%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWL------SNDYGERFSISRQ-GD 96
            +F++ +Y  +  E+LP+   +  +     + L   Y L       ++  E F + R  G 
Sbjct: 1456 KFNEAQYRYTVAEDLPIGTEIDVIQAESAQPL--IYSLVKGSTPESNADEVFVVDRDSGA 1513

Query: 97   ISLMQCLDYETEDSYRFTVYATDTL----MTTSATVNISVVNVNDWDPRFRYPQYELFLP 152
            + L + LD+ET   Y+F +++        +  S  VNI V +VND  P F    YE  + 
Sbjct: 1514 LKLQKSLDHETTKWYQFLLHSQTKHENFDIVASVIVNIQVKDVNDNKPVFESDPYEAVV- 1572

Query: 153  HIPLADLTPGSVIGKVEAADGDKGDR----VTLSLRGPYE---KMFSIN-DSGHISIVDL 204
               + +L  G+ + +V A+D D G       +L  R   E   ++F++N ++G ++   L
Sbjct: 1573 ---VENLPSGTQVIQVRASDQDSGTNGQVIYSLDARQSSEEISELFAVNSETGWVTT--L 1627

Query: 205  SALNTSTIQ---LVVVATDTGNPPRQAS 229
              L+   +Q   + V+ATD G+  + A+
Sbjct: 1628 KELDREKMQRYTIAVLATDQGDRIQHAT 1655



 Score = 47.0 bits (110), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 59/217 (27%), Positives = 95/217 (43%), Gaps = 22/217 (10%)

Query: 27  ALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVL--LTVTTNKPRDLRVKYWLSND 84
           ++AT+ ++       +L+F+K  Y     EN      L  +    N+  +      L+ D
Sbjct: 715 SVATVKINVKENKENKLKFTKESYKAFVQENSSEKKTLEVIAAVGNQVNEPLFYNILNPD 774

Query: 85  YGERFSISR-QGDISLMQC-LDYETEDSYRFTVYATDTLMTTSAT---VNISVVNVNDWD 139
             ++F ISR  G +S      D E +D++   V  T    +       + + V + ND  
Sbjct: 775 --KKFEISRTSGVVSTTGIPFDREAQDTFEIVVEVTREGQSEDGAHVLLTVMVEDANDNR 832

Query: 140 PRFRYPQYELFLPHIPLA--DLTPGSVIGKVEAADGDKGDRVTLS-LRGPYEKMFSINDS 196
           P F      + LP+  L   D   G +I +V A D D G    +  L   +++ F I+ S
Sbjct: 833 PMF------VNLPYHALVQMDAEEGHLIRQVTAVDRDMGQNAEIQYLLKEHQEFFQISPS 886

Query: 197 GHISI---VDLSALNTSTIQLVVVATDTGNPPRQASV 230
           G IS+   +   +LNT  + +VVVA D GNP   A V
Sbjct: 887 GEISLKKKLQKESLNTDFV-IVVVAQDNGNPALSAEV 922



 Score = 45.4 bits (106), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 31/112 (27%), Positives = 57/112 (50%), Gaps = 7/112 (6%)

Query: 91   ISRQGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELF 150
            I  +  + + + LD E +D+Y   + A+D + T  ATV + V++ ND  P+     Y   
Sbjct: 1728 IQNEWKVFVKKPLDREEKDNYLLNITASDGIFTAKATVEVKVLDANDNSPQCEKALYSES 1787

Query: 151  LPHIPLADLTPGSVIGKVEAADGD--KGDRVTLSLRGPYEKMFSIN-DSGHI 199
            +P    A    G +I +V A+D D     ++   L+G   ++F+I+ D+G +
Sbjct: 1788 VPENSPA----GRLILQVSASDADIRSNAQIFYELQGAGSELFTIDSDTGEL 1835



 Score = 45.4 bits (106), Expect = 0.051,   Method: Compositional matrix adjust.
 Identities = 47/160 (29%), Positives = 66/160 (41%), Gaps = 29/160 (18%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVK-----------YWLSNDYGER-FSI- 91
           F + E+     E+ PVN V+LT   N P  +R             Y +   +    F+I 
Sbjct: 519 FIQKEFRGVVSESAPVNSVVLT-RENTPLVVRASDADGDQNAMLIYQIVEPFAHNYFAID 577

Query: 92  SRQGDISLMQCLDYETEDSYRFTVYATD-----TLMTTSATVNISVVNVNDWDPRFRYPQ 146
           S  G I +   LDYE  +++ FTV   D         T+A V I V +VND  P F    
Sbjct: 578 SNTGAIRITTALDYEERNTFHFTVQVHDLGIPRLFAETAANVTIEVTDVNDCPPVFSQKT 637

Query: 147 YELFLPHIPLADLTP---GSVIGKVEAADGDKGDRVTLSL 183
           YE  +       +TP   G  + ++ A D D G    L L
Sbjct: 638 YEATV-------ITPTYKGVKVIQINATDSDSGPNAKLLL 670



 Score = 45.1 bits (105), Expect = 0.053,   Method: Compositional matrix adjust.
 Identities = 62/223 (27%), Positives = 105/223 (47%), Gaps = 18/223 (8%)

Query: 15   VRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVN-YV--LLTVTTNK 71
            +RA+  D   RY  A + V     +    QFS + Y+V+  EN  +  YV  LL    + 
Sbjct: 1853 MRAV--DGGGRYCEADIHVVVEDVNDNLPQFSADLYTVTVFENTEIGTYVAKLLANDVDV 1910

Query: 72   PRDLRVKYWLSNDYGERFSISRQ-GDISLMQCLDYETEDSYRFTVYATDT---LMTTSAT 127
              +  + Y L +     FSI  Q G ISL + LD E + +Y     A+D     +++   
Sbjct: 1911 GPNSNIIYSLLDSADGFFSIDEQTGVISLERPLDRELQSTYELRALASDQGLPRLSSVCQ 1970

Query: 128  VNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LR 184
            V +SV+++ND  P F + +Y   +      D++ G+ + +V+AA  D      +S   + 
Sbjct: 1971 VVVSVLDINDNPPVFEHREYTATVSE----DVSVGTQLLRVQAASRDTEANGEISYGIIS 2026

Query: 185  GPYEKMFSIN-DSGHISIVD-LSALNTSTIQLVVVATDTGNPP 225
            G    +FS++  +G I ++  L    +    + V ATD G+PP
Sbjct: 2027 GNEHGLFSVDPRTGDIFVIQPLDYEASHEYYITVEATDGGSPP 2069



 Score = 38.5 bits (88), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 52/200 (26%), Positives = 87/200 (43%), Gaps = 14/200 (7%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSN-DYGERFSISR------QGD 96
           QFS+  Y V+  E+ P    +L ++ +  RD + K   +     + FS+ +       G 
Sbjct: 209 QFSEKFYEVNVAEDTPPGTEVLQISASD-RDEKNKLTFTLLSSTDPFSLRKFRLDPGTGT 267

Query: 97  ISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
           +   + LD+ET   +  TV   D  +     +   +VNV+D +    +     F   +  
Sbjct: 268 LYTAETLDHETMHHHILTVMVRDQDIPVKRNLVRVIVNVDDTNDNAPWFVGAPFSGRV-F 326

Query: 157 ADLTPGSVIGKVEAADGDKGD--RVTLSLR-GPYEKMFSINDS-GHISIV-DLSALNTST 211
                GS + +V A D DKG    V  SL  G +   FSI+   G I++  +L   + + 
Sbjct: 327 ESAAVGSAVLQVTARDKDKGRNAEVVYSLESGNFANTFSIDPKLGTITVAKELDRDSKAQ 386

Query: 212 IQLVVVATDTGNPPRQASVP 231
            +L V A+D G PP   + P
Sbjct: 387 YELTVKASDNGVPPLSTTAP 406


>gi|326664293|ref|XP_690661.5| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 1 [Danio
           rerio]
          Length = 882

 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 104/225 (46%), Gaps = 10/225 (4%)

Query: 8   LQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVN-YVLLT 66
           +  ITL ++A Q ++  + A A + V          +F + EY +S  EN P + ++L T
Sbjct: 197 IDQITLYIQAAQQNDSSKTANAVVSVIIEDVDDNSPKFDQEEYIISIPENSPKDQFMLQT 256

Query: 67  VTTNKPRDLRVKYWLSNDYGERFSISRQGDISLMQ--CLDYETEDSYRFTVYATDT---L 121
           + T+   D   K     D  + F I+ QG ISL +   LD ET D Y   V A D     
Sbjct: 257 IVTDLDLDGFSKGHFIMD-SDIFVINSQGLISLGRDATLDRETNDHYTLEVVAVDQPVDG 315

Query: 122 MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTL 181
           + ++A V I+V+++N+ +P+F      + +        +PG V  K+ A D D GD    
Sbjct: 316 LRSTAQVIITVLDINNNNPQFLPLPEPIEIQEGEYTQSSPGEVC-KISATDADIGDNGLF 374

Query: 182 SLR-GPYEKMFSINDSGHI-SIVDLSALNTSTIQLVVVATDTGNP 224
           S     Y K F  +D G + +I +L         +V+ A D G P
Sbjct: 375 SFSTSSYSKYFICSDDGTLQAISELDREMHDVYDVVITAVDHGIP 419



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 49/173 (28%), Positives = 78/173 (45%), Gaps = 16/173 (9%)

Query: 85  YGERFSISRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPR 141
           Y + F  S  G +  +  LD E  D Y   + A D     +    TV +S+ +VND  P 
Sbjct: 381 YSKYFICSDDGTLQAISELDREMHDVYDVVITAVDHGIPQLNNMTTVRVSITDVNDNAPV 440

Query: 142 FRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSI----NDSG 197
           F    Y      I + D   G ++  V A D D GD   ++    + ++ SI     ++G
Sbjct: 441 FSSETYS---RSILVRDAKVGELLLTVSATDKDAGDNALITYS--FSEVSSIVALDAETG 495

Query: 198 HISIV-DLSALNTSTI-QLVVVATDTGNPPRQASVPAIMHF--PEAIVQQASS 246
            I++  DLS +   T+  L V+ATD G  P       ++HF   E++  ++SS
Sbjct: 496 DITLTSDLSEVTEDTLLTLSVIATDHGATPLSDEAEILIHFKIAESVYFESSS 548



 Score = 43.5 bits (101), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 53/195 (27%), Positives = 83/195 (42%), Gaps = 33/195 (16%)

Query: 33  VSKAGTSLRELQ--------FSKNEYSVSALENLPVNYVLLTVTTNKPRDL-------RV 77
           + K  T ++E++        F    YS +  E L V   +L V   K  D+       R+
Sbjct: 1   MKKENTRIKEVEDINDNSPIFESKTYSATVSEKLAVGSDVLRV---KAEDIDISLENSRI 57

Query: 78  KYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVND 137
            Y +     E F +   G+I L+  L+Y     Y FTV A D    +  T     +  ND
Sbjct: 58  TYSILPPAPEDFEVRSDGNIRLLNRLNYNNFHQYIFTVEAQDPGGLSDTTTVTITIVDND 117

Query: 138 -WDPRFRYPQYELFLPHIPL---ADLTPGSVIGKVEAADGDKGDR------VTLSLRGPY 187
             +P F +  Y+  +    +   +D+TP +    ++A DGD G        +T  L   Y
Sbjct: 118 NLNPYFDHILYKATIKENEIGHFSDVTPEA----IKAQDGDTGINEPVVYSLTTVLPNEY 173

Query: 188 EKMFSIN-DSGHISI 201
           + +F IN DSG IS+
Sbjct: 174 QSIFDINRDSGVISV 188


>gi|405951091|gb|EKC19034.1| Cadherin-23 [Crassostrea gigas]
          Length = 1838

 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 80/151 (52%), Gaps = 23/151 (15%)

Query: 49   EYSVSALENLPVNYVLLTVTT-NKPRDLRVKYWLSNDYGERFSI--SRQGDISLMQCLDY 105
            +Y V+  E   VN +++TV   +K +   V Y +  D    F I  SR G ++L + LDY
Sbjct: 870  QYHVNVSEGREVNDLVITVAAVDKDKKQTVFYRIGQDDINSFQIMDSRVGTVTLKKQLDY 929

Query: 106  ETEDSYRFTVYATD------TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPH---IPL 156
            E+     FTV ATD      +++T++ATV++S++++ND  P+        FLPH     +
Sbjct: 930  ESNHEVSFTVIATDSASPPSSVLTSTATVSVSLIDINDNTPQ--------FLPHPTQYSV 981

Query: 157  ADLTP-GSVIGKVEAADGDKG--DRVTLSLR 184
             +  P G+ +G + A D D G    +T SL+
Sbjct: 982  EENAPNGTFVGNITATDRDSGRFGEITYSLQ 1012



 Score = 40.4 bits (93), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 43/157 (27%), Positives = 65/157 (41%), Gaps = 16/157 (10%)

Query: 30  TLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDL---RVKYWLSND-- 84
           TL +S     + E  F    Y  S  EN  V   ++ V+   P +     V Y++     
Sbjct: 70  TLFISDVNDEVPE--FVNLRYKESIYENATVGTTVIRVSAQDPDNGLGGTVSYYMEAADE 127

Query: 85  -YGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDTLMTTS---ATVNISVVNVNDWD 139
            Y   F I S  GD+ +   LD+E  + Y F + A D     S   A   ++V++V D  
Sbjct: 128 LYKNAFRINSDTGDVIINSSLDFERHNFYEFVIKAKDGFGNESINNADFVVTVLDVQDTP 187

Query: 140 PRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG 176
           P F    Y + +      D   G  + +V A DGD+G
Sbjct: 188 PAFFNLPYSVVVGE----DKAVGERVLQVTALDGDRG 220



 Score = 39.3 bits (90), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 50/188 (26%), Positives = 86/188 (45%), Gaps = 40/188 (21%)

Query: 103 LDYETEDSYRFTVYA----TDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLAD 158
           LDYE   +  F V A    T+   ++S  + + +++VND  P+F    Y        +A+
Sbjct: 381 LDYEKSKTATFDVIARELRTNPKRSSSVKMMVHILDVNDNQPQFENTSYSA-----QIAE 435

Query: 159 LTP-GSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDSGHISIVDLSALN------- 208
            +P G+   +++A D D G   ++T S+RG   + F INDS    I +  AL+       
Sbjct: 436 NSPTGTTFARLQATDLDSGVFGKITYSVRGGNGR-FGINDSTG-DIYNTEALDREKISEY 493

Query: 209 ------------TSTIQLVVVATDTG-NPP---RQASVPAIMHFPEAIVQQ---ASSKLN 249
                        +T++L V  TDT  N P   R+A   ++     + V++    ++ L+
Sbjct: 494 YITVEAKDGGGFRTTVELNVKVTDTNDNKPLFTREAYFASLKEGATSFVRELKLEATDLD 553

Query: 250 SGTSSTVL 257
            G +S VL
Sbjct: 554 EGMNSQVL 561


>gi|358342555|dbj|GAA37708.2| protocadherin-1 [Clonorchis sinensis]
          Length = 1274

 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 70/300 (23%), Positives = 132/300 (44%), Gaps = 50/300 (16%)

Query: 47  KNEYSVSALENLP----VNYVLLTVTTNKPRDLRVKYWLSNDYG--------ERFSISRQ 94
           K  +SV+  EN P    V+  L+ +  +   + RV+Y L   +         + F +   
Sbjct: 630 KGPFSVT--ENQPRFTQVSGRLVAIDQDDGENGRVRYSLRQSWKSANGAPAPDLFQVDAD 687

Query: 95  GDISLMQCLDYETEDSYRFTVYATD----TLMTTSATVNISVVNVNDWDPRFRYPQYELF 150
           G I  ++ LD ET ++Y   + A D    T + TS    ++V++ ND  P +RYP  +  
Sbjct: 688 GRIQTLEVLDRETTNAYTLELMACDSAPQTPLCTSLNATVTVLDENDNKPIWRYPHDQDK 747

Query: 151 LPHIPLADLTPGSVIGKVEAADGDKGD--RVTLSLRGPYEK-MFSI-NDSGHISIVDL-- 204
             +I  ADL PG VI +V A D D  +  RV  SL  P+ + +F + N +G I++     
Sbjct: 748 EVNI-TADLPPGHVIARVHATDQDAAENGRVVYSLIDPHRRTVFQVDNKTGDIAVAQSNP 806

Query: 205 ---------------SALNTSTIQLVVVATDTGNPPRQASVPAIMHFPEAIVQQASSKLN 249
                          S L     +L + A+D G+P + A       + +  V    + ++
Sbjct: 807 AAPSETNFQPNANKPSPLLPGIYRLRLRASDQGHPQQVAET-----WLQVNVFSTDNVVS 861

Query: 250 SGTSSTVLIILGVVLIVLGFVIILLILYIHKNKHTKNNGPPGSSHSKNDSFLSNVILPEK 309
           +G +  +++++  V  ++   +++ I+ + +   +       +SH  +D    N   P +
Sbjct: 862 AGLNFMIIVVMVGVTGLISICLVIAIICVRRRSFSLR-----ASHGSHDRTRPNGFRPGR 916


>gi|449498435|ref|XP_002191035.2| PREDICTED: protocadherin-11 X-linked-like [Taeniopygia guttata]
          Length = 1231

 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 37/115 (32%), Positives = 61/115 (53%), Gaps = 8/115 (6%)

Query: 73  RDLRVKYWLSNDYGERFSISRQ-GDISLMQCLDYETEDSYRFTVYATDTLM---TTSATV 128
           R+  + Y L +D    F++ R+ G ++ ++ LD E +D Y FTV A D  M    T+ATV
Sbjct: 497 RNAEISYILGSDAPPIFNLDRRTGILTAVRKLDREKQDRYSFTVLAKDNGMPPLQTNATV 556

Query: 129 NISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSL 183
            +SV++ ND  P F + +Y  ++P     +L     +G +   D D GD   ++L
Sbjct: 557 TVSVLDQNDNSPAFTHNEYNFYVPE----NLPMYGTVGLITVTDADAGDNAAVTL 607



 Score = 58.2 bits (139), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 70/240 (29%), Positives = 103/240 (42%), Gaps = 27/240 (11%)

Query: 11  ITLVVRAIQYDNQDRYAL---------------ATLIVSKAGTSLRELQFSKNEYSVSAL 55
           I   VR +  + QDRY+                AT+ VS    +     F+ NEY+    
Sbjct: 521 ILTAVRKLDREKQDRYSFTVLAKDNGMPPLQTNATVTVSVLDQNDNSPAFTHNEYNFYVP 580

Query: 56  ENLPV--NYVLLTVTTNKPRD-LRVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYR 112
           ENLP+     L+TVT     D   V   + N           G I      D E + SY 
Sbjct: 581 ENLPMYGTVGLITVTDADAGDNAAVTLSILNGRDNFIIDPLTGVIRPNITFDREQQGSYT 640

Query: 113 FTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVE 169
           F V A D      +++A V I+VV+VND  P F  P        +P +  +PGSV+ KV 
Sbjct: 641 FQVKAVDGGRLQRSSTAKVTINVVDVNDNRPVFVIPSSNYSYELVPTS-ASPGSVVTKVF 699

Query: 170 AADGDKGDRVTLS---LRGPYEKMFSIND-SGHISIVD-LSALNTSTIQLVVVATDTGNP 224
           A D D G    L    + G    +F+I+  +G+I++ + + A +    +LV+   D G P
Sbjct: 700 AVDNDTGMNAELRYSIIGGNARGLFTIDQLTGNITLKEKVIASDHGLHRLVIKVNDLGQP 759



 Score = 40.4 bits (93), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 36/135 (26%), Positives = 57/135 (42%), Gaps = 11/135 (8%)

Query: 103 LDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADL 159
           LDYE    Y   + A+D+    +  SA + I + + ND  P F  P   L +P     + 
Sbjct: 424 LDYEATREYAIKIVASDSGKPPLNQSAMLLIKIKDENDNAPVFTQPIIGLSIPE----NN 479

Query: 160 TPGSVIGKVEAADGDKGDRVTLS--LRGPYEKMFSINDSGHI--SIVDLSALNTSTIQLV 215
            PG+ + K+ A D D G    +S  L      +F+++    I  ++  L           
Sbjct: 480 APGTQLTKISATDADSGRNAEISYILGSDAPPIFNLDRRTGILTAVRKLDREKQDRYSFT 539

Query: 216 VVATDTGNPPRQASV 230
           V+A D G PP Q + 
Sbjct: 540 VLAKDNGMPPLQTNA 554


>gi|432099002|gb|ELK28484.1| Protocadherin Fat 1 [Myotis davidii]
          Length = 3387

 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 44/179 (24%), Positives = 85/179 (47%), Gaps = 14/179 (7%)

Query: 13  LVVRAIQYDNQDRYALATL---IVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTT 69
           L ++A+      +++   L    +SK   SL  + F ++ ++ + +E+ PV +++  +  
Sbjct: 320 LSIKAVDNGRPQKWSTTRLHIEWISKPKPSLEPISFEESFFTFTVMESDPVAHMIGVIAV 379

Query: 70  NKPRDLRVKYW---LSNDYGERFSISR-QGDISLMQCLDYETEDSYRFTVYATDTLMTTS 125
             P       W   +  +Y   F + +  G I + + LD E +  Y  TV ATD   T  
Sbjct: 380 EPPG---TPLWFDIIGGNYESHFDVDKGTGTIIVAKPLDAEQKSDYNLTVEATDGTSTIL 436

Query: 126 ATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR 184
             V I V++ ND  P+F   +YE+ +P     D  P + I ++ A D D+ +++  +L+
Sbjct: 437 TQVFIKVIDTNDHRPQFSTSKYEVVIPE----DTAPETEILQISAVDKDEKNKLIYTLQ 491



 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 63/218 (28%), Positives = 102/218 (46%), Gaps = 20/218 (9%)

Query: 29   ATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDL----RVKYWLSND 84
            A + V+  G +L    F +NEY V   EN PV + L+T       D      + Y + ND
Sbjct: 1476 AQVHVTVIGGNLHSPVFLQNEYEVELAENAPV-HTLVTAVKATDGDAGVYGHITYHIVND 1534

Query: 85   YG-ERFSISRQGDISLMQCLDYE--TEDSYRFTVYATDTLMTTS-ATVNISVVNVNDWDP 140
            +  +RF  + +G +  ++ LD E   E      + A D     +  T+N+ + + ND  P
Sbjct: 1535 FARDRFYTNERGQVFTLEKLDREIPAEKVIPVRLMAKDAGGKVAFCTINVILTDDNDNAP 1594

Query: 141  RFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDR--VTLSLRGPYEKM---FSIND 195
            +FR  +YE+ +     +D   G+ + KV A+D D+G    VT +L    + +     I+ 
Sbjct: 1595 QFRATRYEVNIG----SDAPKGTSVIKVLASDADEGSNADVTYALEADSDSVQENLEIHR 1650

Query: 196  -SGHISIVD-LSALNTSTIQLVVVATDTGNPPRQASVP 231
             SG I+  + L  L        V A D G+PPR++ VP
Sbjct: 1651 LSGVITTKESLIGLEDEVFTFFVRAVDGGSPPRESVVP 1688



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 62/198 (31%), Positives = 96/198 (48%), Gaps = 27/198 (13%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSN-DYGERFSIS-RQGDISLMQC 102
            F K  YS    EN+ V+  ++ V  N P  L+V Y +++ D   +F+I+   G I ++  
Sbjct: 1182 FEKPFYSAEIPENIQVHSPVVHVQANSPEGLKVLYSITDGDPFSQFTINFNTGVIHVIAP 1241

Query: 103  LDYETEDSYRFTVYATDTLMTTSATVNISVV--NVNDWDPRFRYPQYELFLPHIPLADLT 160
            LD+E   +Y+ +V ATD+L    A V + +V  ++ND  P F    Y         A L+
Sbjct: 1242 LDFEAHPAYKLSVRATDSLTGAHAEVFVDIVVEDINDNAPVFAQQAY--------AATLS 1293

Query: 161  PGSVIG----KVEAADGDK--GDRVTLSLRGPYEK---MFSINDS-GHISIVDLSALNTS 210
              SVIG    +V A D D      ++  + G + K    F I+ S G IS+V   AL+  
Sbjct: 1294 EASVIGTSVVRVRATDADSEPNRGISYHMSGNHSKSHDHFHIDSSTGVISLV--RALDYE 1351

Query: 211  TI---QLVVVATDTGNPP 225
             +   ++ V A D G PP
Sbjct: 1352 QVRQHRIAVRAVDGGMPP 1369



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 84/303 (27%), Positives = 139/303 (45%), Gaps = 32/303 (10%)

Query: 5    DDFLQPI-TLVVRAIQYDNQDRY-ALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNY 62
            D  LQ + TL V+A+      R  A  T++VS    +     F   EY  S  E++ V  
Sbjct: 2188 DRELQAVYTLTVKAVDQGVPRRLTATGTVVVSVLDINDNPPVFEYREYGASVSEDVLVGT 2247

Query: 63   VLLTVTTNKPRDLR----VKYWL--SNDYGERFSI-SRQGDISLMQCLDYETEDSYRFTV 115
             +L V     RD+     + Y +   N++G +FSI S+ G I +++ LDYE+   Y  TV
Sbjct: 2248 EILQVYAAS-RDIEANADITYSIIGGNEHG-KFSIDSKTGAIFIIENLDYESSHEYYLTV 2305

Query: 116  YATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAAD 172
             ATD     ++  ATVN++V ++ND  P F    Y   +    + +    +V+   + AD
Sbjct: 2306 EATDGGTPSLSDVATVNVNVTDINDNTPVFSQDTYTAVVSEDAILEQPVLTVMA--DDAD 2363

Query: 173  GDKGDRVTLS-LRGPYEKMFSINDS-GHISIVDLSALNTSTIQ---LVVVATDTGNPPRQ 227
            G     +  S + G     F+I+ + G + +  L  L+  TI    L V A+D G+PPR 
Sbjct: 2364 GPLNSHIHYSIIDGNQGNPFTIDPTRGEVKVTKL--LDRETISGYTLTVQASDNGSPPRV 2421

Query: 228  ASVPAIMHFPEAIVQQASSKLNSGTSSTVLIILGVVLIVLGFVIILLILYIHKNKHTKNN 287
             +    +   +  V   +     G  S ++     V    GF ++ L++    +K + +N
Sbjct: 2422 NTTTVNIDVSD--VNDNAPVFAQGNYSVIIQENKPV----GFSVLQLVV---TDKDSSHN 2472

Query: 288  GPP 290
            GPP
Sbjct: 2473 GPP 2475



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 44/145 (30%), Positives = 70/145 (48%), Gaps = 8/145 (5%)

Query: 90   SISRQGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYEL 149
            +I  +  + + + LD E  D+Y  T+ ATD   ++ A V + V++ ND  P      Y  
Sbjct: 1971 NIQNEWKVYVKKPLDREKRDNYLLTITATDGTFSSKAIVEVKVLDANDNSPVCEKTLYSD 2030

Query: 150  FLPHIPLADLTPGSVIGKVEAADGD--KGDRVTLSLRGPYEKMFSIN-DSGHI-SIVDLS 205
             +P     D  PG +I +V A D D      +T +L GP  + F++N D+G + ++  L 
Sbjct: 2031 TIPE----DAFPGKLIMQVAATDADIRSNAEITYTLFGPGAEKFNLNPDTGELKTLAPLD 2086

Query: 206  ALNTSTIQLVVVATDTGNPPRQASV 230
                +   L+V ATD G    QA V
Sbjct: 2087 REEQAVYNLLVKATDGGGRFCQAHV 2111



 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 57/237 (24%), Positives = 100/237 (42%), Gaps = 37/237 (15%)

Query: 11   ITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTN 70
             T  VRA+   +  R ++  + V      +R  +FS+  Y+ +  E++P+   +  +   
Sbjct: 1669 FTFFVRAVDGGSPPRESVVPVYVKVLPPEMRLPKFSEPFYTYTVSEDMPIGTEIDLIRAE 1728

Query: 71   KPRDLRVKYWLSN----DYGERFSISRQ-GDISLMQCLDYETEDSYRFTVYAT----DTL 121
                +       N    +  E F I RQ G + L + LD+ET   Y+F++ A     D  
Sbjct: 1729 HSGTVLYSLVKGNTPESNRDEFFVIDRQSGRLKLEKSLDHETTKWYQFSILARCAHGDHE 1788

Query: 122  MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTL 181
            +  S  V+I V + ND  P      YE F+    + +   GS + +V A+D D G    +
Sbjct: 1789 LVASVDVSIQVKDANDNSPVLESNPYEAFI----VENQPGGSRVIQVRASDLDSGANGQV 1844

Query: 182  SLRGPYEKMFSINDSGHISIVDLSALNTST----------------IQLVVVATDTG 222
                    M+S++ S  + +++  A+N  T                 Q+ VVA+D G
Sbjct: 1845 --------MYSLDQSQSVEVIESFAINMETGWITTLKELDHEKRDSYQIKVVASDHG 1893



 Score = 43.5 bits (101), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 43/162 (26%), Positives = 74/162 (45%), Gaps = 14/162 (8%)

Query: 45   FSKNEYSVSALENLPVNY-VLLTVTTNKPRDLRVKYWL-----SNDYGERFSISRQGDIS 98
            F++  YSV   EN PV + VL  V T+K        +       ND G  F +++QG + 
Sbjct: 2440 FAQGNYSVIIQENKPVGFSVLQLVVTDKDSSHNGPPFFFTIESGNDDGA-FEVTQQGVLL 2498

Query: 99   LMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIP 155
                ++ +  D Y   V   D     +++   V++ V+  + + P       E+F+    
Sbjct: 2499 TAAAIERKVRDHYSLRVKVADNGKPQLSSLTYVDLMVIEESIYPPAIL--PLEIFI--TA 2554

Query: 156  LADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSG 197
            + +   G VIGK+ A D D  D +T SL    + +FS++ +G
Sbjct: 2555 VGEEYAGGVIGKIHATDQDVYDTLTYSLDPQMDGLFSVSSAG 2596



 Score = 42.7 bits (99), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 46/161 (28%), Positives = 75/161 (46%), Gaps = 18/161 (11%)

Query: 76   RVKYWLSNDYGERFSISRQ-GDISLMQCLDYETEDSYRFTVYATDTL-MTTSATVNISVV 133
             + Y L     E+F+++   G++  +  LD E +  Y   V ATD       A V +++ 
Sbjct: 2057 EITYTLFGPGAEKFNLNPDTGELKTLAPLDREEQAVYNLLVKATDGGGRFCQAHVVLTLE 2116

Query: 134  NVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMF 191
            +VND  P F    + + +      +  PG+++ +V+A D D G   ++  SL    +  F
Sbjct: 2117 DVNDNAPEFSADPHTITV----FENTEPGTLLTRVQATDADAGLNRKIAYSLINSADGQF 2172

Query: 192  SIND-SGHISI-----VDLSALNTSTIQLVVVATDTGNPPR 226
            SIN+ SG I +      +L A+ T    L V A D G P R
Sbjct: 2173 SINELSGIIQLEKPLDRELQAVYT----LTVKAVDQGVPRR 2209



 Score = 40.8 bits (94), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 47/151 (31%), Positives = 70/151 (46%), Gaps = 24/151 (15%)

Query: 77   VKYWLSNDYG---ERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDTLM---TTSATVN 129
            + Y +S ++    + F I S  G ISL++ LDYE    +R  V A D  M   ++   V 
Sbjct: 1318 ISYHMSGNHSKSHDHFHIDSSTGVISLVRALDYEQVRQHRIAVRAVDGGMPPLSSEVVVT 1377

Query: 130  ISVVNVNDWDPRFRYPQYELFLPHIPLADL----TPGSVIGKVEAADGDKGDRVTLS--- 182
            + V ++ND  P        LF PH+  A +    T G  +  V+A D D  D  TL    
Sbjct: 1378 VDVTDLNDNPP--------LFDPHVYEAKISEHATHGHFVTCVKAYDADSSDADTLEYSI 1429

Query: 183  LRGPYEKMFSINDSGHISIVDLSALNTSTIQ 213
            L G  +K F ++  G   I+ LS L   T++
Sbjct: 1430 LSGNDQKSFVMD--GETGIITLSNLRQVTLK 1458



 Score = 37.7 bits (86), Expect = 8.3,   Method: Compositional matrix adjust.
 Identities = 39/128 (30%), Positives = 56/128 (43%), Gaps = 21/128 (16%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRDLR------------VKYWLSNDYGERFSI- 91
           F + EY+    E+  +N V+LT   N P  +R            V + +     + F+I 
Sbjct: 765 FMQAEYTGLVSESASLNSVVLT-DKNVPLVIRATDADKESNALLVYHIVEPSIHKYFAID 823

Query: 92  SRQGDISLMQCLDYETEDSYRFTVYATDT-----LMTTSATVNISVVNVNDWDPRFRYPQ 146
           S  G I  +  LDYE   ++RFTV   D          +A V I V+++ND  P F    
Sbjct: 824 SSTGAIHTVLSLDYEETSTFRFTVQVHDMGTPRLFAEYAANVTIHVIDINDCPPVFSKSL 883

Query: 147 YE--LFLP 152
           YE  L LP
Sbjct: 884 YEASLLLP 891


>gi|27801594|emb|CAD60623.1| novel protein similar to human procadherin 15 (PCDH15) [Danio
           rerio]
          Length = 479

 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 61/199 (30%), Positives = 98/199 (49%), Gaps = 16/199 (8%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNK--PRDLRVKYWLSNDYGERFSISRQ-GDISLMQ 101
           F++  YSV    N+     +L  T  +  P   R++   + D  E F++SR  G + L +
Sbjct: 180 FAQVSYSVEIFTNMLPGETVLQATDRELDPITYRIE---TGDPQEVFNLSRTIGLLLLAK 236

Query: 102 CLDYETEDSYRFTVYATDTL--MTTSATVNISVVNVNDWDPRFRYPQYELFLP-HIPLAD 158
            LD ET D YR  V A+D      ++ATV+I + +VND DP F     +L LP ++ + +
Sbjct: 237 PLDRETIDQYRLIVTASDGHPGGISTATVSIVITDVNDNDPSF-----DLTLPRNLTVRE 291

Query: 159 LTPGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSINDSGHI-SIVDLSALNTSTIQLVV 216
                 +G+V A D D G    +  R   +  +FSIN +G I + V L     S   L+V
Sbjct: 292 EEANVFVGQVRATDPDGGLNGQVRYRLLSFASLFSINSTGSIFTAVPLDRETRSRYDLIV 351

Query: 217 VATDTGNPPRQASVPAIMH 235
            A+D    PR+ ++  ++ 
Sbjct: 352 EASDGAVDPRRTTITLLVE 370



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 51/167 (30%), Positives = 81/167 (48%), Gaps = 17/167 (10%)

Query: 76  RVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDTLM---TTSATVNISV 132
           +V+Y L + +   FSI+  G I     LD ET   Y   V A+D  +    T+ T+ + V
Sbjct: 313 QVRYRLLS-FASLFSINSTGSIFTAVPLDRETRSRYDLIVEASDGAVDPRRTTITLLVEV 371

Query: 133 VNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYE-KMF 191
           +++ND  P F  P Y + +P     +   GS+I ++ A D D    VT  ++     ++F
Sbjct: 372 LDINDNSPVFSQPVYTVNVPE----NTPAGSIILRLTAVDADLVSNVTYRIKTEAALQLF 427

Query: 192 SIND-SGHISI---VDLSAL--NTSTIQLVVVATDTGN--PPRQASV 230
           ++N  +G IS+   +D  +L    ST    V A D G   PP  A+V
Sbjct: 428 AVNRLTGVISVLQALDFESLAAGNSTYTFEVEALDHGGVLPPGTATV 474


>gi|344275011|ref|XP_003409307.1| PREDICTED: protocadherin-15 isoform 1 [Loxodonta africana]
          Length = 1938

 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 67/242 (27%), Positives = 112/242 (46%), Gaps = 29/242 (11%)

Query: 6   DFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVL- 64
           DF Q   LV++A Q +     A A+L +     + +   F+   Y    LE+ PV   + 
Sbjct: 356 DFHQKFDLVIKAEQDNGHPLPAFASLHIEILDENNQSPYFTMPAYQGYILESAPVGSTIS 415

Query: 65  --LTVTT-----------NKPRDLRVKYWLSNDYGERFSISRQG---DISLMQCLDYETE 108
             L +TT              +D  V  +L NDY   F++++ G    ++L+Q +D E +
Sbjct: 416 DSLNLTTPLRIIVLDKDVEDTKDPEVHLFL-NDYTSVFTVTQTGITRYLTLLQPVDREEQ 474

Query: 109 DSYRFTVYATDTLMTTSAT-VNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGK 167
            +Y F++ A D +  +    VNI V++ ND  P F    YE+++      D++PG  + +
Sbjct: 475 QTYTFSITAFDGVQESEPVIVNIQVMDANDNTPTFPEISYEVYV----YTDMSPGDSVIQ 530

Query: 168 VEAADGDKGD--RVTLSLRGPYEKMFSIND-SGHISIV-DLSALNTSTIQLVVVATDTGN 223
           + A D D+G    +T  +    +  F IN  +G I+I   +  +   T  L V A D  N
Sbjct: 531 LTAVDADEGSNGEITYEILVGDQGDFIINKTTGLITIAPGVELIVGRTYALTVQAAD--N 588

Query: 224 PP 225
           PP
Sbjct: 589 PP 590



 Score = 48.9 bits (115), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 70/233 (30%), Positives = 102/233 (43%), Gaps = 26/233 (11%)

Query: 13   LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKP 72
            LVV A       R++  TL +           F+ + Y+V   ENLP     L +   K 
Sbjct: 787  LVVVATDGAVHPRHSTLTLAIKVLDIDDNSPVFTNSTYTVVVEENLPAGTTFLKIEA-KD 845

Query: 73   RDL--RVKYWLSNDYGERFSISR--QGDISLMQCLDYET----EDSYRFTVYATD---TL 121
             DL   V Y + +   + F       G++SL++ LDYE     E +  F V A D   T+
Sbjct: 846  VDLGANVSYRIRSPEVKHFFALHPFTGELSLLRSLDYEAFPEQEATITFLVEAFDIYGTM 905

Query: 122  MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDK----GD 177
                ATV + V ++ND+ P F    Y+  +      D   G+ I  V A D D       
Sbjct: 906  PPGIATVTVIVKDMNDYPPVFNKRIYKGMV----APDAVKGTPITTVYAEDADPPGLPAS 961

Query: 178  RVTL---SLRGPY-EKMFSI-NDSGH-ISIVDLSALNTSTIQLVVVATDTGNP 224
            RV      ++ PY   +F +  DSG  I+ V+L+   T+  +LVVVA D G P
Sbjct: 962  RVRYRVDDVQFPYPASIFDVVEDSGLVITRVNLNEEPTTIFKLVVVAFDDGEP 1014



 Score = 46.6 bits (109), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 53/193 (27%), Positives = 94/193 (48%), Gaps = 10/193 (5%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGER-FSISRQ-GDISLMQ 101
           +F +  YS+   E + +  VLL +         + Y + N   +R F++S   G ++L +
Sbjct: 615 RFPQLMYSLEISEAMRIGAVLLNLQATDREGDPITYAIENGDPQRVFNLSENTGILTLGK 674

Query: 102 CLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLP-HIPLADLT 160
            LD E+ D Y   V A+D     ++T  ++VV  +        P ++ +LP ++ + +  
Sbjct: 675 ALDRESTDRYILIVTASDGRPDGTSTATVNVVVTDV---NDNAPVFDPYLPRNLSVVEEE 731

Query: 161 PGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDSGHI-SIVDLSALNTSTIQLVVV 217
             + +G+V A D D G   +V  SL G +  +F I  +G I + V L+       +LVVV
Sbjct: 732 ANAFVGQVRATDPDAGINGQVHYSL-GNFNNLFRITSNGSIYTAVKLNREVRDYYELVVV 790

Query: 218 ATDTGNPPRQASV 230
           ATD    PR +++
Sbjct: 791 ATDGAVHPRHSTL 803



 Score = 45.8 bits (107), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 50/171 (29%), Positives = 80/171 (46%), Gaps = 17/171 (9%)

Query: 76  RVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDTLMT---TSATVNISV 132
           +V Y L N +   F I+  G I     L+ E  D Y   V ATD  +    ++ T+ I V
Sbjct: 751 QVHYSLGN-FNNLFRITSNGSIYTAVKLNREVRDYYELVVVATDGAVHPRHSTLTLAIKV 809

Query: 133 VNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEK-MF 191
           ++++D  P F    Y + +      +L  G+   K+EA D D G  V+  +R P  K  F
Sbjct: 810 LDIDDNSPVFTNSTYTVVVEE----NLPAGTTFLKIEAKDVDLGANVSYRIRSPEVKHFF 865

Query: 192 SIND-SGHISI---VDLSAL--NTSTIQLVVVATDTGN--PPRQASVPAIM 234
           +++  +G +S+   +D  A     +TI  +V A D     PP  A+V  I+
Sbjct: 866 ALHPFTGELSLLRSLDYEAFPEQEATITFLVEAFDIYGTMPPGIATVTVIV 916


>gi|344265078|ref|XP_003404614.1| PREDICTED: protocadherin gamma-A10-like [Loxodonta africana]
          Length = 819

 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 66/206 (32%), Positives = 98/206 (47%), Gaps = 21/206 (10%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKY---WLSNDYGERFSISRQ-GDI 97
           F+  EY VS  ENLPV   LLTVT    ++  +  V Y    L + +  +F ++   G+I
Sbjct: 242 FTLPEYQVSVPENLPVGTRLLTVTATDRDEGANGEVTYSFRKLPDTHLLKFQLNENTGEI 301

Query: 98  SLMQCLDYETEDSYRFTVYATD-TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
            + + LDYE  DSY   + A D      +A V I+V +VND  P        +F P    
Sbjct: 302 KISENLDYEETDSYEIEIQAEDGGAYLATAKVLITVEDVNDNSPEVT--TTSVFSPVT-- 357

Query: 157 ADLTPGSVIGKVEAADGDKGD--RVTLSLRG--PYEKMFSINDSGHISIVDLSALN---T 209
            D  PG+VI  +   D D G   +VT  + G  P++   SI+   +  +V   AL+    
Sbjct: 358 EDSPPGTVIALLNVHDLDSGQNGQVTCFISGNLPFKLEKSID--SYYRLVTDRALDRELV 415

Query: 210 STIQLVVVATDTGNPPRQASVPAIMH 235
           S+  + V ATD G+PP    +   +H
Sbjct: 416 SSYNITVTATDGGSPPLSTEIHLTLH 441



 Score = 51.6 bits (122), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 73/279 (26%), Positives = 123/279 (44%), Gaps = 46/279 (16%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKP---RDLRVKYWLSND--YGERFSI-----SRQ 94
           FS   YS    EN P+   + +VT + P   ++ RV Y L+ D   G   S      S  
Sbjct: 452 FSYVSYSTYIPENNPIGVSIFSVTAHDPDSEKNARVTYSLTEDTIRGAPLSSYVSINSDT 511

Query: 95  GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFL 151
           G +  ++  DYE     +  V A D+    ++++ ++++ V++ ND  P   YP     +
Sbjct: 512 GVLYALRSFDYEQFRELQMQVTACDSGDPPLSSNMSLSVFVLDQNDNAPEILYPA----V 567

Query: 152 P-----HIPLADLT--PGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-DSGHI- 199
           P      + LA  +  PG ++ KV A D D G    L+   L+     +F++   +G + 
Sbjct: 568 PTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLTYRLLKASEPGLFAVGVHTGEVR 627

Query: 200 ---SIVDLSALNTSTIQLVVVATDTGNPPRQASVPAIM----HFPEAIVQQASSKLNSGT 252
              ++ D  AL  S   LVV   D G PP  A+V   +      P+ +    S +L +  
Sbjct: 628 TARALQDRDALKQS---LVVAVQDHGQPPLSATVTLTVAVADSIPDVLADLGSLELPADP 684

Query: 253 SSTVLII------LGVVLIVLGFVIILLILYIHKNKHTK 285
           +++ L +        V  +   FVI+LL L + +  HTK
Sbjct: 685 TASGLTLYLVVAVASVSCVFFAFVIVLLALRLRR-WHTK 722



 Score = 45.8 bits (107), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 47/139 (33%), Positives = 66/139 (47%), Gaps = 19/139 (13%)

Query: 101 QCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLP-HIPL 156
           + LD E   SY  TV ATD     ++T   + + V ++ND  P F Y  Y  ++P + P+
Sbjct: 408 RALDRELVSSYNITVTATDGGSPPLSTEIHLTLHVADINDNPPAFSYVSYSTYIPENNPI 467

Query: 157 ADLTPGSVIGKVEAADGD--KGDRVTLSL-----RG-PYEKMFSIN-DSGHI-SIVDLSA 206
                G  I  V A D D  K  RVT SL     RG P     SIN D+G + ++     
Sbjct: 468 -----GVSIFSVTAHDPDSEKNARVTYSLTEDTIRGAPLSSYVSINSDTGVLYALRSFDY 522

Query: 207 LNTSTIQLVVVATDTGNPP 225
                +Q+ V A D+G+PP
Sbjct: 523 EQFRELQMQVTACDSGDPP 541


>gi|327274092|ref|XP_003221812.1| PREDICTED: protocadherin Fat 4-like [Anolis carolinensis]
          Length = 4863

 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 75/264 (28%), Positives = 118/264 (44%), Gaps = 42/264 (15%)

Query: 2    INEDD-----FLQPITLVVR---AIQYDNQDRYALATLIVSKAGTSL------------- 40
            ++EDD     FL P+T V      + Y+ Q  Y L        G S+             
Sbjct: 1924 VSEDDGDGTFFLNPVTGVFNLTCMLDYEMQQYYILTIRAEDGGGQSITVRVYINILDVND 1983

Query: 41   RELQFSKNEYSVSALENL-PVNYVLLTVTTNKP--RDLRVKYWL-SNDYGERFSISRQGD 96
                FS + YS S +ENL P + + L   T+     + ++ Y + S D   +F+I + G 
Sbjct: 1984 NAPIFSMDSYSTSLMENLSPGSTIFLFNVTDADDGSNSQLSYSITSGDSLSQFNIDKNGI 2043

Query: 97   ISLMQCLDYETEDSYRFTVYATD------TLMTTSATVNISVVNVNDWDPRFRYPQYELF 150
            +S+ Q LD E++  Y   V   D      +  T++  V+I +++VND  P F  P+    
Sbjct: 2044 LSIRQPLDRESQSFYSLIVQVHDMASLPTSRFTSTTQVSIILLDVNDNPPSFISPK---- 2099

Query: 151  LPHIPLADLTP-GSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIND-SGHISIV-DLS 205
            L +IP  + TP  +++ K +A D D G    +  SL  P  K FSI    G + +  +L 
Sbjct: 2100 LTYIP--ENTPVDTIVFKAQATDPDSGPNSYIEYSLLNPSGKKFSIGTIDGEVRLTGELD 2157

Query: 206  ALNTSTIQLVVVATDTGNPPRQAS 229
                S   L ++ATD G P   +S
Sbjct: 2158 RETVSNYTLTIIATDKGQPSLSSS 2181



 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 67/224 (29%), Positives = 105/224 (46%), Gaps = 37/224 (16%)

Query: 45   FSKNEYSVSALENLPV--NYVLLTVTTNKPRDLRVK--YWL--SNDYGERFSISRQGDIS 98
            F  + YSV+  ENL      +L  V  +  + L  K  Y L   N+ G  F++S  GDI 
Sbjct: 2303 FELSPYSVNVPENLEKLPKLILQVVARDDDQGLNSKLTYLLVGGNEDGA-FTLSPSGDIH 2361

Query: 99   LMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIP 155
            L++ LD E ++ Y   + ATD+    +T + T+ + V +VND  P+F    + ++L  IP
Sbjct: 2362 LVKSLDREKKEQYVMLITATDSGSPTLTGTGTIAVKVDDVNDNIPKF---AFNMYLKTIP 2418

Query: 156  LADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDS-GHI---SIVDL------- 204
              D   G+ +  V ++D D      +SL G     F+IN S G I   +++D        
Sbjct: 2419 -EDAPTGTDVLLVNSSDADASVNAIISLSGG-NSQFTINPSTGQIITSALLDRETKENYT 2476

Query: 205  -----------SALNTSTIQLVVVATDTGNPPRQASVPAIMHFP 237
                       +AL++ST  LV +A    NPP+    P + H P
Sbjct: 2477 LIIVARDGGFPNALSSSTSVLVTIADVNDNPPKFQHHPYVTHIP 2520



 Score = 58.9 bits (141), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 54/192 (28%), Positives = 99/192 (51%), Gaps = 12/192 (6%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDLR--VKYWLS-NDYGERFSISR-QGDISLM 100
            FS++ YS    EN+ ++Y + +V+ +   DL   + Y ++  D    F I++  G I+  
Sbjct: 837  FSQDTYSFVVFENVALDYHVGSVSAST-MDLNTNITYLITMGDQRGMFEINKVTGLITTA 895

Query: 101  QCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLT 160
              +D E +  Y+  V A+   +   A VNI+V ++ND  P F +    + +    + + +
Sbjct: 896  SVIDREEQAFYQLKVVASGGAIAGDALVNITVKDLNDNSPHFLHAVESVDV----VENWS 951

Query: 161  PGSVIGKVEAADGDKGDR--VTLSLRGPYEKMFSIND-SGHISIVDLSALNTSTIQLVVV 217
             G  I + +A D D+G    V  SL+   + +FS+N+ SG IS+     +N  + Q+ ++
Sbjct: 952  TGHTIFQAKAVDPDEGINGIVLYSLKQNPKDLFSVNEQSGAISLTGPLDINAGSYQVEIM 1011

Query: 218  ATDTGNPPRQAS 229
            A+D G P R +S
Sbjct: 1012 ASDLGVPRRSSS 1023



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 60/194 (30%), Positives = 91/194 (46%), Gaps = 26/194 (13%)

Query: 50   YSVSALENLPVNYVLLTVTTNKPRDLRV----KYWLSNDYGERFSIS-RQGDISLMQCLD 104
            +S    EN P+ Y +  VTT+   D+ V    +Y L  +    F I+   GDI++ + L+
Sbjct: 2821 FSALVPENAPLGYTVTRVTTSD-EDIGVNAVSRYSL-KETNTPFVINPNTGDITISRLLN 2878

Query: 105  YETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSV 164
             E  D YR  V A D+  T S  V I V ++ND  PRF  P Y L  P   L ++  GS 
Sbjct: 2879 REDADRYRIRVSAHDSGWTVSTDVTIFVTDINDNSPRFTKPSYYLDCPE--LNEI--GSK 2934

Query: 165  IGKVEAADGDKGD--RVTLSLRGPYEKMFSINDSGHISIVDLSAL-----------NTST 211
            + ++ A D D+G   +V   ++   E  F IN S    I +  +L           N + 
Sbjct: 2935 VTQISATDPDEGSNGQVFYFIKSQSE-FFRINASTG-EIFNKQSLKFQNSSGSGNANLNR 2992

Query: 212  IQLVVVATDTGNPP 225
               +V ++D G+PP
Sbjct: 2993 HSFIVTSSDRGSPP 3006



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 46/158 (29%), Positives = 83/158 (52%), Gaps = 13/158 (8%)

Query: 87   ERFSISRQ-GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRF 142
            ++F+I    G ++L+  LD+E   SY  T+ A D+    +++  T+NI V++ ND  P F
Sbjct: 1300 KQFTIDNSTGQVTLIGKLDHEATASYSLTIQAVDSGAVSLSSVCTLNIEVLDENDNSPSF 1359

Query: 143  RYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTL--SLRGP-YEKMFSIN-DSGH 198
              P+  LF+    L ++  G ++  V A D D GD   L  S+ G      FSI+ ++G 
Sbjct: 1360 --PKSTLFVD--VLENMRIGELVSSVTATDSDSGDNADLHYSITGTNNHGTFSISPNTGS 1415

Query: 199  ISIVDLSALNTSTI-QLVVVATDTGNPPRQASVPAIMH 235
            I +       T ++ +L + A D G PP+ +++  +++
Sbjct: 1416 IFLAKALDFETQSMYKLNITAKDKGRPPQSSTMSVVIY 1453



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 57/198 (28%), Positives = 86/198 (43%), Gaps = 24/198 (12%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKY-WLSNDYGERFSISRQGDISLM 100
            F +  Y V+  E  PVN    +V     +   +  + Y  +  + G+ F I   G + + 
Sbjct: 1040 FDQLSYEVTISELEPVNSRFFSVHASDKDSGENGEIAYNIIEGNTGDAFGIFPDGQLYIK 1099

Query: 101  QCLDYETEDSYRFTVYATDTLMTT-SATVNISVV--NVNDWDPRFRYPQYELFLPHIPLA 157
              LD E ++ Y   V A+D  +   SATVN+SV+  +VND  P F    Y  +     + 
Sbjct: 1100 SELDRELQERYTLVVAASDRAVEPLSATVNVSVILEDVNDNRPLFNSTNYAFYYEEEQVG 1159

Query: 158  DLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKM---FSIND-SGHISI---VDLSAL--- 207
                GS +GK+ A D D G      +R  +E M   F +N  SG I     +D  +L   
Sbjct: 1160 ----GSFVGKISAFDKDSGSNG--EVRYSFEHMQPDFELNAISGEIKSTHQLDRESLMRQ 1213

Query: 208  -NTSTIQLVVVATDTGNP 224
              T+     V+A D G P
Sbjct: 1214 RGTAVFTFTVIAMDQGLP 1231



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 55/196 (28%), Positives = 94/196 (47%), Gaps = 15/196 (7%)

Query: 50   YSVSALENLPVNYVLLTVTTNKPRDLRVKYWL-SNDYGERFSISR-QGDISLMQCLDYET 107
            +S +  EN   N  + +++    R   + Y++ S + G  F I +  G  S+ Q LDYE 
Sbjct: 2616 HSFTFPENQASNTFVTSISGVSSRGDSLSYYIASGNLGSTFQIDQLTGHFSISQPLDYEA 2675

Query: 108  EDSYRFTVYATDTLM---TTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSV 164
               Y   + A D      ++ A + I+V+++ND  P F   + + F+  + + +  P S 
Sbjct: 2676 IQKYVVWIEARDMGFPPFSSYAKLEITVIDINDNMPVF---EQDPFI--VEVVENIPPSK 2730

Query: 165  IGKVEAADGDKGDRVTLS---LRGPYEKMFSINDS-GHI-SIVDLSALNTSTIQLVVVAT 219
            I  V AAD D G    L+   + G  +  FSI+ + G I S+  L   N +   L + A+
Sbjct: 2731 IITVTAADKDSGPNGQLNYEIISGNVDNSFSIHRANGEIRSVRPLDRENVAQYMLTIKAS 2790

Query: 220  DTGNPPRQASVPAIMH 235
            D G P + ASV  +++
Sbjct: 2791 DRGTPVQSASVQVLIN 2806



 Score = 48.9 bits (115), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 41/82 (50%), Gaps = 4/82 (4%)

Query: 95   GDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHI 154
            G++   + LD E    Y   V A D L ++   +NI+V +VND  P+F    Y   +P  
Sbjct: 1838 GELIATKRLDRERRSKYSLLVRADDGLQSSDMRINITVSDVNDHIPKFSKLWYSFDIPE- 1896

Query: 155  PLADLTPGSVIGKVEAADGDKG 176
               D TPGS++  + A D D G
Sbjct: 1897 ---DTTPGSLVAAILATDEDSG 1915



 Score = 48.5 bits (114), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 49/183 (26%), Positives = 88/183 (48%), Gaps = 16/183 (8%)

Query: 56   ENLPVNYVLLTVTTNKPR---DLRVKYWLSNDYGERFSISR-QGDISLMQCLDYETEDSY 111
            EN PV+ ++       P    +  ++Y L N  G++FSI    G++ L   LD ET  +Y
Sbjct: 2105 ENTPVDTIVFKAQATDPDSGPNSYIEYSLLNPSGKKFSIGTIDGEVRLTGELDRETVSNY 2164

Query: 112  RFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKV 168
              T+ ATD     +++S  V + V+++ND +P F    Y++ +      ++  G+ + +V
Sbjct: 2165 TLTIIATDKGQPSLSSSTNVVVVVLDINDNNPVFAQKLYKIEIAE----NILTGTDVVQV 2220

Query: 169  EAADGDKGDRVTLS---LRGPYEKMFSIND-SGHISI-VDLSALNTSTIQLVVVATDTGN 223
             + DGD+G    +    + G     F I+  +G I++   L      +  L V + D G+
Sbjct: 2221 SSTDGDEGSNGQVRYAIISGNINNEFRIDSVTGVITVGKSLDREKKPSYSLTVQSADRGS 2280

Query: 224  PPR 226
             PR
Sbjct: 2281 SPR 2283



 Score = 47.0 bits (110), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 54/192 (28%), Positives = 97/192 (50%), Gaps = 15/192 (7%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWL-SNDYGERFSI-SRQGDISL 99
            F++  Y +   EN+     ++ V++   ++  + +V+Y + S +    F I S  G I++
Sbjct: 2198 FAQKLYKIEIAENILTGTDVVQVSSTDGDEGSNGQVRYAIISGNINNEFRIDSVTGVITV 2257

Query: 100  MQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
             + LD E + SY  TV + D   +    + TV+I +++VND+ P F    Y + +P   L
Sbjct: 2258 GKSLDREKKPSYSLTVQSADRGSSPRIDTTTVSIILIDVNDYIPTFELSPYSVNVPE-NL 2316

Query: 157  ADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEK-MFSINDSGHISIV-DLSALNTSTI 212
              L    +I +V A D D+G   ++T  L G  E   F+++ SG I +V  L        
Sbjct: 2317 EKLP--KLILQVVARDDDQGLNSKLTYLLVGGNEDGAFTLSPSGDIHLVKSLDREKKEQY 2374

Query: 213  QLVVVATDTGNP 224
             +++ ATD+G+P
Sbjct: 2375 VMLITATDSGSP 2386



 Score = 46.6 bits (109), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 52/191 (27%), Positives = 83/191 (43%), Gaps = 16/191 (8%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGERFSIS-RQGDISLM 100
            FS  +Y  S LEN P    ++ ++    +   +  + Y + +   + F I    G I+  
Sbjct: 3238 FSPEDYFPSVLENAPSGTTVIHLSATDADSGSNAVIAYAVQSSDSDLFVIDPNTGIITTQ 3297

Query: 101  QCLDYETEDSYRFTVYA---TDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLA 157
              LDYET+ SY  T+ A    D    + A VNI +   N++ PRF    Y   +      
Sbjct: 3298 GFLDYETKQSYHLTIKAFNVPDEERCSFANVNIHLKGTNEYVPRFVSKLYYFEVSEA--- 3354

Query: 158  DLTPGSVIGKVEAAD---GDKGDRVTLSLRGPYEKMFSIN-DSGHISIVD-LSALNTSTI 212
                G+++G+V A+D   G  G+   L      +K F I+  SG I +   L       I
Sbjct: 3355 -AAKGTIVGEVFASDRDTGTDGEVHYLIFGNSRKKGFQIDVSSGQIYVTGPLDREKEERI 3413

Query: 213  QLVVVATDTGN 223
             L V+A + G+
Sbjct: 3414 SLKVLAKNAGS 3424



 Score = 45.4 bits (106), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 60/226 (26%), Positives = 95/226 (42%), Gaps = 35/226 (15%)

Query: 44   QFSKNEYSVSALENL-PVNYVLLTVTTNKPRDL--RVKYWLSNDYGER--FSISRQGDIS 98
            +FSK  YS    E+  P + V   + T++   +   + Y +S D G+   F     G  +
Sbjct: 1884 KFSKLWYSFDIPEDTTPGSLVAAILATDEDSGVNGEITYTVSEDDGDGTFFLNPVTGVFN 1943

Query: 99   LMQCLDYETEDSYRFTVYATDTL-MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLA 157
            L   LDYE +  Y  T+ A D    + +  V I++++VND  P F    Y   L    + 
Sbjct: 1944 LTCMLDYEMQQYYILTIRAEDGGGQSITVRVYINILDVNDNAPIFSMDSYSTSL----ME 1999

Query: 158  DLTPGSVIGKVEAADGDKGDRVTLSLR---GPYEKMFSINDSGHISIV------------ 202
            +L+PGS I      D D G    LS     G     F+I+ +G +SI             
Sbjct: 2000 NLSPGSTIFLFNVTDADDGSNSQLSYSITSGDSLSQFNIDKNGILSIRQPLDRESQSFYS 2059

Query: 203  ------DLSALNTS----TIQLVVVATDTGNPPRQASVPAIMHFPE 238
                  D+++L TS    T Q+ ++  D  + P     P + + PE
Sbjct: 2060 LIVQVHDMASLPTSRFTSTTQVSIILLDVNDNPPSFISPKLTYIPE 2105



 Score = 41.6 bits (96), Expect = 0.70,   Method: Compositional matrix adjust.
 Identities = 63/250 (25%), Positives = 96/250 (38%), Gaps = 54/250 (21%)

Query: 11  ITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSK-NEYSVSALENLPVNYVLLTVTT 69
           + L + A     Q + + A L+V+    +    QFS+ + Y VS  EN P    LL +T 
Sbjct: 582 VVLNISARDQGVQPKISYAQLVVNILDVNDERPQFSQPDGYHVSVAENSPSGTELLVLTA 641

Query: 70  NKPRDLRVKYWLSNDYGERFSISR-----------------------QGDISLMQCLDYE 106
                  +   L ++   RFS+                          G +S +  LD E
Sbjct: 642 -------IDGDLGDNGTVRFSLQETEPGVSAGGPFVAPWRIFRLDPVSGRLSTISQLDRE 694

Query: 107 TEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGS 163
            +  Y   V ATD     +++   VN+S+++VND  P F   QY     HI   +   GS
Sbjct: 695 EQGHYSLQVLATDLGYPTLSSVVQVNVSLLDVNDNSPLFYPVQY---FAHI-QENEPAGS 750

Query: 164 VIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSGHISIVDLSALNTS----------TIQ 213
            +  V A+D D      L + G      S  D+    I + + + TS            Q
Sbjct: 751 YVATVSASDPD------LGINGTVRYTISAGDTSRFQIHNQTGVITSKTVLDREEKTAYQ 804

Query: 214 LVVVATDTGN 223
           L + A D GN
Sbjct: 805 LQIGAYDGGN 814



 Score = 40.8 bits (94), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 43/142 (30%), Positives = 70/142 (49%), Gaps = 20/142 (14%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVT-----TNKPRDLRVKYWLSNDYGERFSIS-RQGDIS 98
            F K+   V  LEN+ +  ++ +VT     +    DL      +N++G  FSIS   G I 
Sbjct: 1359 FPKSTLFVDVLENMRIGELVSSVTATDSDSGDNADLHYSITGTNNHG-TFSISPNTGSIF 1417

Query: 99   LMQCLDYETEDSYRFTVYATDTL---MTTSATVNISVVNVNDWDPRFRYPQYELF---LP 152
            L + LD+ET+  Y+  + A D      +++ +V I V + ND  P+F  P  ++F   + 
Sbjct: 1418 LAKALDFETQSMYKLNITAKDKGRPPQSSTMSVVIYVRDYNDNPPKF--PPGDIFKSIVE 1475

Query: 153  HIPLADLTPGSVIGKVEAADGD 174
            +IP+     GS +  V A D D
Sbjct: 1476 NIPV-----GSSVISVTAHDPD 1492



 Score = 38.9 bits (89), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 37/135 (27%), Positives = 65/135 (48%), Gaps = 8/135 (5%)

Query: 89   FSISRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYP 145
            FS++  G +S  + +D E    +  +V   D+    M+++ TV+I V++ ND   + R  
Sbjct: 3602 FSLNTAGVLSTTREIDREQICDFYLSVITRDSGIPQMSSTGTVHIKVIDQNDNPSQPR-- 3659

Query: 146  QYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSGHISIVDLS 205
              E+F+ +    +L PG  +G V+  D D  D    SL      +F+I  SG  ++  L+
Sbjct: 3660 TVEVFVHY--YGNLFPGGTLGNVKPQDPDVLDSFQCSLTSGVTTLFNI-PSGTCNLNSLA 3716

Query: 206  ALNTSTIQLVVVATD 220
                 T  L V++ D
Sbjct: 3717 RSTDGTFDLTVLSDD 3731



 Score = 37.7 bits (86), Expect = 9.1,   Method: Compositional matrix adjust.
 Identities = 53/192 (27%), Positives = 83/192 (43%), Gaps = 18/192 (9%)

Query: 51   SVSALENLPVNYVLLTVTTNKPRDLR---VKYWLSNDYGERFSISRQ-GDISLMQCLDYE 106
            SV  +EN    + +       P +     V Y L  +  + FS++ Q G ISL   LD  
Sbjct: 943  SVDVVENWSTGHTIFQAKAVDPDEGINGIVLYSLKQNPKDLFSVNEQSGAISLTGPLDIN 1002

Query: 107  TEDSYRFTVYATDTLM---TTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTP-G 162
               SY+  + A+D  +   ++S  + +SV +VND  P F    YE     + +++L P  
Sbjct: 1003 A-GSYQVEIMASDLGVPRRSSSFILTVSVHDVNDNSPVFDQLSYE-----VTISELEPVN 1056

Query: 163  SVIGKVEAADGDKGDRVTLS---LRGPYEKMFSINDSGHISI-VDLSALNTSTIQLVVVA 218
            S    V A+D D G+   ++   + G     F I   G + I  +L         LVV A
Sbjct: 1057 SRFFSVHASDKDSGENGEIAYNIIEGNTGDAFGIFPDGQLYIKSELDRELQERYTLVVAA 1116

Query: 219  TDTGNPPRQASV 230
            +D    P  A+V
Sbjct: 1117 SDRAVEPLSATV 1128


>gi|397478153|ref|XP_003810420.1| PREDICTED: protocadherin-11 X-linked-like [Pan paniscus]
 gi|75072431|sp|Q71M42.1|PC11X_PANTR RecName: Full=Protocadherin-11 X-linked; Short=Protocadherin-11;
           AltName: Full=Protocadherin on the X chromosome;
           Short=PCDH-X; Flags: Precursor
 gi|33317689|gb|AAQ04773.1| putative protocadherinX [Pan troglodytes]
          Length = 1347

 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 63/195 (32%), Positives = 93/195 (47%), Gaps = 20/195 (10%)

Query: 45  FSKNEYSVSALENLPVNYV--LLTVTTNKPRDLRVKYWLSNDYGERFSISRQ-GDISLMQ 101
           F+ NEY+    ENLP +    L+TVT     D         D  + F+I  Q G I    
Sbjct: 570 FTHNEYNFYVPENLPRHGTVGLITVTDPDYGDNSAVTLSILDENDDFTIDSQTGVIRPNI 629

Query: 102 CLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYP----QYELFLPHI 154
             D E ++SY F V A D      ++SA V I+VV+VND  P F  P     YEL LP  
Sbjct: 630 SFDREKQESYTFYVKAEDGGRVSRSSSAKVTINVVDVNDNKPVFIVPPSNYSYELVLP-- 687

Query: 155 PLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-DSGHISIVDLSALNTS 210
                 PG+V+ +V A D D G    +    + G    +F+I+ ++G+I++++   +   
Sbjct: 688 ---STNPGTVVFQVMAVDNDTGMNAEVRYSIVGGNTRDLFAIDQETGNITLMEKCDVTDL 744

Query: 211 TIQLVVV-ATDTGNP 224
            +  V+V A D G P
Sbjct: 745 GLHRVLVKANDLGQP 759



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/114 (32%), Positives = 61/114 (53%), Gaps = 10/114 (8%)

Query: 76  RVKYWLSNDYGERFSISRQ-GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNIS 131
            + Y L  D    FS+ R+ G +++++ LD E ED Y FT+ A D     +T++ TV +S
Sbjct: 500 EINYLLGPDAPPEFSLDRRTGMLTVVKKLDREKEDKYLFTILAKDNGVPPLTSNVTVFVS 559

Query: 132 VVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDR--VTLSL 183
           +++ ND  P F + +Y  ++P     +L     +G +   D D GD   VTLS+
Sbjct: 560 IIDQNDNSPVFTHNEYNFYVPE----NLPRHGTVGLITVTDPDYGDNSAVTLSI 609



 Score = 37.7 bits (86), Expect = 8.4,   Method: Compositional matrix adjust.
 Identities = 36/139 (25%), Positives = 67/139 (48%), Gaps = 15/139 (10%)

Query: 103 LDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADL 159
           LD E +D+Y   V   D      +++A + +SV + ND  P F+  + E+ +P     + 
Sbjct: 207 LDREEKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVFKETEIEVSIPE----NA 262

Query: 160 TPGSVIGKVEAADGDKGDRVTLS------LRGPYEKMFSIN-DSGHISIVD-LSALNTST 211
             G+ + ++ A D D G+   +       +     ++F +N  +G I+I + L    T  
Sbjct: 263 PVGTSVTQLHATDADIGENAKIHFSFSNLVSNIARRLFHLNATTGLITIKEPLDREETPN 322

Query: 212 IQLVVVATDTGNPPRQASV 230
            +L+V+A+D G  P +A V
Sbjct: 323 HKLLVLASDGGLMPARAMV 341


>gi|308480179|ref|XP_003102297.1| CRE-CDH-12 protein [Caenorhabditis remanei]
 gi|308262223|gb|EFP06176.1| CRE-CDH-12 protein [Caenorhabditis remanei]
          Length = 2951

 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 52/199 (26%), Positives = 94/199 (47%), Gaps = 14/199 (7%)

Query: 13   LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVL--LTVTTN 70
            +VVRA+       Y+   + ++   T+   L+F +  Y+    E+L     +  ++VT +
Sbjct: 1382 VVVRAVNMQANKFYSDVGVAITPVSTTNPTLRFQQPTYNFEVYESLGKGEAIGTISVTGS 1441

Query: 71   KPRDLRVKYWLSNDYGERFSISRQGDISLMQCLDYET-EDSY--RFTVYATDTLMTTSAT 127
             P   ++    S+ +     I + G + L + +D E  EDS    FTV ATD   +    
Sbjct: 1442 APSTRQLSISPSDSF---LGIHQNGTLFLAETVDAEELEDSLNQEFTVTATDGTESARCR 1498

Query: 128  VNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR--- 184
            V I++ +VN++ P F     E+ +      D +PG+ IG+++A D D  ++  L+ R   
Sbjct: 1499 VQIAIRDVNEFQPEFDEDDVEMSMER---GDSSPGTRIGRIQAHDRDVSEKNRLTYRIVG 1555

Query: 185  GPYEKMFSINDSGHISIVD 203
            G   K+  I + G I + D
Sbjct: 1556 GSGRKLVFIQEDGTIIVGD 1574



 Score = 48.5 bits (114), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 53/190 (27%), Positives = 89/190 (46%), Gaps = 22/190 (11%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGE-RFSI-SRQGDISLMQ 101
            +F+K+EYS S   ++P+ + ++T+   +     V+Y L  D  + +F I S+ G +S   
Sbjct: 1723 KFTKDEYSGSIPVDIPIGFPIVTI---EAIGADVEYSLQGDPCDTQFQIDSKTGKVSYKV 1779

Query: 102  CLDYETEDSYRFTVYATDTLMTTSATVNISVV------NVNDWDPRFRYPQYELFLPHIP 155
              D  T+ +    V A+D   +T  T+ + V          +  P F  P+Y LF     
Sbjct: 1780 PRDQRTDGNVVCVVVASDGRHSTDTTLRLEVQPGKTKPPTPNHAPTFSAPEY-LFTVSQN 1838

Query: 156  LADLTPGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSINDSGHISIVDLSALNTSTIQL 214
              +L      G VEA+D D  D +T S+    Y  +F ++ +G I++  L  L       
Sbjct: 1839 ATEL------GVVEASDTDN-DPITYSIEPTEYRNLFHVDSTGRITV--LGGLEQPRYSF 1889

Query: 215  VVVATDTGNP 224
            +VVA D G+P
Sbjct: 1890 LVVAEDRGDP 1899



 Score = 46.6 bits (109), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 48/143 (33%), Positives = 71/143 (49%), Gaps = 12/143 (8%)

Query: 89   FSISRQ-GDISLMQCLDYETEDSYRFTVYA--TDTLMTTSATVNISVVNVNDWDPRFRYP 145
            F I  Q G++S  + LD E +  YRF V A  T T+ +TS  + + VV+VND  P     
Sbjct: 948  FEIHEQSGEVSTSRPLDTEQKKFYRFQVRACLTQTICSTSDVI-VEVVDVNDNAPVLMNR 1006

Query: 146  QYELFLPHIPLADLTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSINDSGHISIVD 203
            + E  +     +D+ PG+ I K+ A D D G+  ++T SL    +  FSI DS    +  
Sbjct: 1007 KLEATVE----SDVPPGTKIVKLFAKDVDSGNNSKLTFSLED-NKDAFSI-DSTTGQLTT 1060

Query: 204  LSALNTSTIQLVVVATDTGNPPR 226
              +L      L+V  +D G P R
Sbjct: 1061 SQSLTNPLYTLLVTVSDNGIPKR 1083



 Score = 44.3 bits (103), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 43/156 (27%), Positives = 77/156 (49%), Gaps = 10/156 (6%)

Query: 73   RDLRVKYWLSNDYGE-RFSISRQGDISLMQCLDYETEDSYRFTVYA-TDTLMTTSATVNI 130
            +D  VKY + +      F ++ +G + + +  D E  DSY FT+ A ++T     A +N+
Sbjct: 2191 QDHGVKYSIEDTTSHLPFFLTPEGKLIMFEA-DRERHDSYLFTILAKSETNDLAKARLNV 2249

Query: 131  SVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKM 190
            ++++VND  P F+     + +    L  +  GS + +++A D D+   VT S+    +  
Sbjct: 2250 TILDVNDNYPSFQKHPETIGI----LRSMYVGSPVYQMKADDADENSEVTYSIEP--KDF 2303

Query: 191  FSINDSGHISIVDLSALNTSTIQ-LVVVATDTGNPP 225
            FSI+    +  V+    +    Q L V A D+G PP
Sbjct: 2304 FSIDAREGLIRVNGDLRDAPAYQELKVTAQDSGKPP 2339



 Score = 37.7 bits (86), Expect = 9.9,   Method: Compositional matrix adjust.
 Identities = 31/126 (24%), Positives = 55/126 (43%), Gaps = 5/126 (3%)

Query: 11   ITLVVRAIQYDNQ---DRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTV 67
            +T+V+   Q DN+      A AT           + +FS+N YS      LPV  ++ T+
Sbjct: 1909 VTVVLAEEQMDNEVTIGTKAPATHAPQATQAPPPQFEFSQNVYSWRVQAGLPVGTIVGTI 1968

Query: 68   TTNKPRDLRVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDTLMTTSAT 127
             +N P+   ++Y   +  G+  SI  +G +++M+  +    D    T    + L  T   
Sbjct: 1969 KSNGPKTDDIEYTFIS--GDHLSIDSEGRVAVMKPFEKTVNDVVIATRRGGEILAETRVF 2026

Query: 128  VNISVV 133
            V +  V
Sbjct: 2027 VGVEGV 2032


>gi|41223227|emb|CAD92415.1| protocadherin [Homo sapiens]
          Length = 787

 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 76/274 (27%), Positives = 120/274 (43%), Gaps = 40/274 (14%)

Query: 45  FSKNEYSVSALENLPVNYV--LLTVTTNKPRDLRVKYWLSNDYGERFSISRQ-GDISLMQ 101
           F+ NEY+    ENLP +    L+TVT     D         D  + F+I  Q G I    
Sbjct: 390 FTHNEYNFYVPENLPRHGTVGLITVTDPDYGDNSAVTLSILDENDDFTIDSQTGVIRPNI 449

Query: 102 CLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYP----QYELFLPHI 154
             D E ++SY F V A D      ++SA V I+VV+VND  P F  P     YEL LP  
Sbjct: 450 SFDREKQESYTFYVKAEDGGRVSRSSSAKVTINVVDVNDNKPVFIVPPSNCSYELVLPST 509

Query: 155 PLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-DSGHISIVDLSALNTS 210
                 PG+V+ +V A D D G    +    + G    +F+I+ ++G+I++++   +   
Sbjct: 510 -----NPGTVVFQVIAVDNDTGMNAEVRYSIVGGNTRDLFAIDQETGNITLMEKCDVTDL 564

Query: 211 TIQLVVV-ATDTGNPPRQASVPAIMHFPEAIVQQAS--------------------SKLN 249
            +  V+V A D G P    SV  +  F    V  A+                    + ++
Sbjct: 565 GLHRVLVKANDLGQPDSLFSVVIVNLFVNESVTNATLINELVRKSTEAPVTPNTEIADVS 624

Query: 250 SGTSSTVLIILGVVLIVLGFVIILLILYIHKNKH 283
           S TS  V I++  V   +  V+++ I  + + + 
Sbjct: 625 SPTSDYVKILVAAVAGTITVVVVIFITAVVRCRQ 658



 Score = 57.8 bits (138), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 37/114 (32%), Positives = 61/114 (53%), Gaps = 10/114 (8%)

Query: 76  RVKYWLSNDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNIS 131
           ++ Y L  D    FS+  R G +++++ LD E ED Y FT+ A D     +T++ TV +S
Sbjct: 320 KINYLLGPDAPPEFSLDCRTGMLTVVKKLDREKEDKYLFTILAKDNGVPPLTSNVTVFVS 379

Query: 132 VVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDR--VTLSL 183
           +++ ND  P F + +Y  ++P     +L     +G +   D D GD   VTLS+
Sbjct: 380 IIDQNDNSPVFTHNEYNFYVPE----NLPRHGTVGLITVTDPDYGDNSAVTLSI 429



 Score = 38.1 bits (87), Expect = 8.2,   Method: Compositional matrix adjust.
 Identities = 37/140 (26%), Positives = 69/140 (49%), Gaps = 17/140 (12%)

Query: 103 LDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLP-HIPLAD 158
           LD E +D+Y   V   D      +++A + +SV + ND  P F+  + E+ +P + P+  
Sbjct: 27  LDREEKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVFKETEIEVSIPENAPV-- 84

Query: 159 LTPGSVIGKVEAADGDKGDRVTLS------LRGPYEKMFSIN-DSGHISIVD-LSALNTS 210
              G+ + ++ A D D G+   +       +     ++F +N  +G I+I + L    T 
Sbjct: 85  ---GTSVTQLHATDADIGENAKIHFSFSNLVSNIARRLFHLNATTGLITIKEPLDREETP 141

Query: 211 TIQLVVVATDTGNPPRQASV 230
             +L+V+A+D G  P +A V
Sbjct: 142 NHKLLVLASDGGLMPARAMV 161


>gi|7657443|ref|NP_055337.1| protocadherin-11 X-linked isoform a precursor [Homo sapiens]
 gi|6978935|dbj|BAA90765.1| protocadherin-Xa [Homo sapiens]
          Length = 1021

 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 76/274 (27%), Positives = 120/274 (43%), Gaps = 40/274 (14%)

Query: 45  FSKNEYSVSALENLPVNYV--LLTVTTNKPRDLRVKYWLSNDYGERFSISRQ-GDISLMQ 101
           F+ NEY+    ENLP +    L+TVT     D         D  + F+I  Q G I    
Sbjct: 570 FTHNEYNFYVPENLPRHGTVGLITVTDPDYGDNSAVTLSILDENDDFTIDSQTGVIRPNI 629

Query: 102 CLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYP----QYELFLPHI 154
             D E ++SY F V A D      ++SA V I+VV+VND  P F  P     YEL LP  
Sbjct: 630 SFDREKQESYTFYVKAEDGGRVSRSSSAKVTINVVDVNDNKPVFIVPPSNCSYELVLPST 689

Query: 155 PLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-DSGHISIVDLSALNTS 210
                 PG+V+ +V A D D G    +    + G    +F+I+ ++G+I++++   +   
Sbjct: 690 -----NPGTVVFQVIAVDNDTGMNAEVRYSIVGGNTRDLFAIDQETGNITLMEKCDVTDL 744

Query: 211 TIQLVVV-ATDTGNPPRQASVPAIMHFPEAIVQQAS--------------------SKLN 249
            +  V+V A D G P    SV  +  F    V  A+                    + ++
Sbjct: 745 GLHRVLVKANDLGQPDSLFSVVIVNLFVNESVTNATLINELVRKSTEAPVTPNTEIADVS 804

Query: 250 SGTSSTVLIILGVVLIVLGFVIILLILYIHKNKH 283
           S TS  V I++  V   +  V+++ I  + + + 
Sbjct: 805 SPTSDYVKILVAAVAGTITVVVVIFITAVVRCRQ 838



 Score = 57.8 bits (138), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 37/114 (32%), Positives = 61/114 (53%), Gaps = 10/114 (8%)

Query: 76  RVKYWLSNDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNIS 131
           ++ Y L  D    FS+  R G +++++ LD E ED Y FT+ A D     +T++ TV +S
Sbjct: 500 KINYLLGPDAPPEFSLDCRTGMLTVVKKLDREKEDKYLFTILAKDNGVPPLTSNVTVFVS 559

Query: 132 VVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDR--VTLSL 183
           +++ ND  P F + +Y  ++P     +L     +G +   D D GD   VTLS+
Sbjct: 560 IIDQNDNSPVFTHNEYNFYVPE----NLPRHGTVGLITVTDPDYGDNSAVTLSI 609



 Score = 38.1 bits (87), Expect = 7.5,   Method: Compositional matrix adjust.
 Identities = 36/139 (25%), Positives = 67/139 (48%), Gaps = 15/139 (10%)

Query: 103 LDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADL 159
           LD E +D+Y   V   D      +++A + +SV + ND  P F+  + E+ +P     + 
Sbjct: 207 LDREEKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVFKETEIEVSIPE----NA 262

Query: 160 TPGSVIGKVEAADGDKGDRVTLS------LRGPYEKMFSIN-DSGHISIVD-LSALNTST 211
             G+ + ++ A D D G+   +       +     ++F +N  +G I+I + L    T  
Sbjct: 263 PVGTSVTQLHATDADIGENAKIHFSFSNLVSNIARRLFHLNATTGLITIKEPLDREETPN 322

Query: 212 IQLVVVATDTGNPPRQASV 230
            +L+V+A+D G  P +A V
Sbjct: 323 HKLLVLASDGGLMPARAMV 341


>gi|41223225|emb|CAD92414.1| protocadherin [Homo sapiens]
          Length = 762

 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 76/274 (27%), Positives = 120/274 (43%), Gaps = 40/274 (14%)

Query: 45  FSKNEYSVSALENLPVNYV--LLTVTTNKPRDLRVKYWLSNDYGERFSISRQ-GDISLMQ 101
           F+ NEY+    ENLP +    L+TVT     D         D  + F+I  Q G I    
Sbjct: 390 FTHNEYNFYVPENLPRHGTVGLITVTDPDYGDNSAVTLSILDENDDFTIDSQTGVIRPNI 449

Query: 102 CLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYP----QYELFLPHI 154
             D E ++SY F V A D      ++SA V I+VV+VND  P F  P     YEL LP  
Sbjct: 450 SFDREKQESYTFYVKAEDGGRVSRSSSAKVTINVVDVNDNKPVFIVPPSNCSYELVLPST 509

Query: 155 PLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-DSGHISIVDLSALNTS 210
                 PG+V+ +V A D D G    +    + G    +F+I+ ++G+I++++   +   
Sbjct: 510 -----NPGTVVFQVIAVDNDTGMNAEVRYSIVGGNTRDLFAIDQETGNITLMEKCDVTDL 564

Query: 211 TIQLVVV-ATDTGNPPRQASVPAIMHFPEAIVQQAS--------------------SKLN 249
            +  V+V A D G P    SV  +  F    V  A+                    + ++
Sbjct: 565 GLHRVLVKANDLGQPDSLFSVVIVNLFVNESVTNATLINELVRKSTEAPVTPNTEIADVS 624

Query: 250 SGTSSTVLIILGVVLIVLGFVIILLILYIHKNKH 283
           S TS  V I++  V   +  V+++ I  + + + 
Sbjct: 625 SPTSDYVKILVAAVAGTITVVVVIFITAVVRCRQ 658



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/114 (32%), Positives = 61/114 (53%), Gaps = 10/114 (8%)

Query: 76  RVKYWLSNDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNIS 131
           ++ Y L  D    FS+  R G +++++ LD E ED Y FT+ A D     +T++ TV +S
Sbjct: 320 KINYLLGPDAPPEFSLDCRTGMLTVVKKLDREKEDKYLFTILAKDNGVPPLTSNVTVFVS 379

Query: 132 VVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDR--VTLSL 183
           +++ ND  P F + +Y  ++P     +L     +G +   D D GD   VTLS+
Sbjct: 380 IIDQNDNSPVFTHNEYNFYVPE----NLPRHGTVGLITVTDPDYGDNSAVTLSI 429



 Score = 37.7 bits (86), Expect = 9.1,   Method: Compositional matrix adjust.
 Identities = 37/140 (26%), Positives = 69/140 (49%), Gaps = 17/140 (12%)

Query: 103 LDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLP-HIPLAD 158
           LD E +D+Y   V   D      +++A + +SV + ND  P F+  + E+ +P + P+  
Sbjct: 27  LDREEKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVFKETEIEVSIPENAPV-- 84

Query: 159 LTPGSVIGKVEAADGDKGDRVTLS------LRGPYEKMFSIN-DSGHISIVD-LSALNTS 210
              G+ + ++ A D D G+   +       +     ++F +N  +G I+I + L    T 
Sbjct: 85  ---GTSVTQLHATDADIGENAKIHFSFSNLVSNIARRLFHLNATTGLITIKEPLDREETP 141

Query: 211 TIQLVVVATDTGNPPRQASV 230
             +L+V+A+D G  P +A V
Sbjct: 142 NHKLLVLASDGGLMPARAMV 161


>gi|410915852|ref|XP_003971401.1| PREDICTED: protocadherin Fat 3-like [Takifugu rubripes]
          Length = 4766

 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 65/232 (28%), Positives = 110/232 (47%), Gaps = 25/232 (10%)

Query: 29   ATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTV-TTNKPRDL--RVKYWLSNDY 85
            A +++   G +L    FS+  Y     EN P    ++ V  T++   L  ++ Y   ND 
Sbjct: 2483 AQVVIRVLGANLYSPVFSQRFYLAEVQENAPPGSKVIQVRATDEDSGLFGQITYSFINDL 2542

Query: 86   GE-RFSISRQGDISLMQCLDYETE--DSYRFTVYATDTLMTTS-ATVNISVVNVNDWDPR 141
            G+ +F++   G IS ++ LD E         TV A D     S  +V + + + ND  PR
Sbjct: 2543 GKTKFAVDADGVISTLEKLDRENALYKDMVLTVVALDGGGRASFCSVRVILADENDNAPR 2602

Query: 142  FRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSI------ 193
            FR  +Y + +     A++  GS++ +++A+D D G   R+T SL    E   S+      
Sbjct: 2603 FRAVEYRMSIK----ANVAKGSLVTQIQASDPDAGSNGRITYSLYS--EARLSLVDVLEV 2656

Query: 194  -NDSG-HISIVDLSALNTSTIQLVVVATDTGNPPRQASVPAIMHF--PEAIV 241
              DSG  ++  ++  L  + +   V ATD G+P + + V A +H   P+A V
Sbjct: 2657 EPDSGWMMTKSNVDHLQGTVLSFFVKATDCGSPAKHSLVSAFIHVVPPDAFV 2708



 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 73/260 (28%), Positives = 106/260 (40%), Gaps = 15/260 (5%)

Query: 12   TLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNK 71
            TL VR          A A+  +S   +     +FS+ EY    +EN  V   + TVT   
Sbjct: 1631 TLTVRVTDSGFPPLMATASARISLMLSDYSSPKFSQKEYQAEIMENGTVGTHVATVTALS 1690

Query: 72   PRDLRVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATD-TLMTTSATVNI 130
               L       N+    +     G I+  + LD+E   SY   V A   T M  S TV +
Sbjct: 1691 RSALFYDISRGNEDLSFYINHHTGVINTRKRLDFEQTPSYFLVVRALSMTRMEASTTVTV 1750

Query: 131  SVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGK------VEAADGDKGDRVTLSLR 184
             V +VND  P F+  +Y   +  I  A      V+G       ++A D D+     L   
Sbjct: 1751 QVGDVNDNSPVFQQLRY---VGTISEAAPVNSVVLGDDGNPLVIQATDLDRNHNALLVFH 1807

Query: 185  GPYE--KMFSINDSGHISIVDLSALNT---STIQLVVVATDTGNPPRQASVPAIMHFPEA 239
               E  +MF   DSG  SI  +++L+    S     V   D+G PPR A  PA +     
Sbjct: 1808 ILDETARMFFSIDSGTGSIRTIASLDYEIFSEFLFQVFVRDSGQPPRSADSPADVVIKVI 1867

Query: 240  IVQQASSKLNSGTSSTVLII 259
             +  +  KL+  T  TVL++
Sbjct: 1868 NINDSPPKLSQDTYETVLLL 1887



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 49/161 (30%), Positives = 73/161 (45%), Gaps = 26/161 (16%)

Query: 35  KAGTSLRELQFSKNEYSVSALENL-PVNY----VLLTVTTNKPRDLRVKYWLSNDYGERF 89
           +AG  L  L F++ +Y+VS LEN  P  Y    V + +    PR L +KY +     E  
Sbjct: 34  RAGQGL--LLFTQPDYNVSILENAAPRTYARCDVKMGINLAPPRTLEIKYSIQTGDSEGL 91

Query: 90  SISR---QGDISLMQ---------CLDYETEDSYRFTVYATDTL-MTTSATVNISVVNVN 136
            ++     GD   ++          L+ E +DSY  T+ A+    +   ATV I V++ N
Sbjct: 92  FMAEGFVMGDFCFLRLRTNGASGAVLNREVQDSYTLTIKASAQRGLEALATVYIRVLDTN 151

Query: 137 DWDPRFRYPQYELFLPH-IPLADLTPGSVIGKVEAADGDKG 176
           D  P F    Y   +P   PL     G+ +G+V A D D G
Sbjct: 152 DLRPLFSPTSYSFVVPESAPL-----GASVGRVTATDADMG 187



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 65/204 (31%), Positives = 96/204 (47%), Gaps = 23/204 (11%)

Query: 43   LQFSKNEYSVSALENLPVNYVLLTVTTNKPR-DLRVKYWLSNDYGERFSISRQGDISLMQ 101
            L F+  EYS S  EN+    ++  V+T   R +  ++Y L N  GERF I     + L  
Sbjct: 1983 LIFTSPEYSASIPENISNVTLVSVVSTVGHRLNEPLRYTLLN-AGERFVIRPTCGVVLTT 2041

Query: 102  C--LDYETEDSYRFTVYAT---DTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
                D E  DSY   V  +   + L     TV + V +VND  P F      + LP+   
Sbjct: 2042 GVPFDREERDSYELVVEVSREEEILKVARVTVQVQVEDVNDNAPEF------VNLPYYAA 2095

Query: 157  A--DLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIND-SGHISIVDL--SALNT 209
               D  P S I KV A D D G    V+ SL+  + + F +N  +G +++     + L+ 
Sbjct: 2096 VQVDAEPESAIFKVSAVDRDAGVNGEVSYSLKQQH-RNFQVNPVTGELTLKKAFEADLSN 2154

Query: 210  STIQLVVVATDTGNPP--RQASVP 231
            +  +LV+VATD G PP  R+  +P
Sbjct: 2155 AEYKLVLVATDGGFPPLSREVELP 2178



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 58/195 (29%), Positives = 87/195 (44%), Gaps = 18/195 (9%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWLSNDYGERFSISR-QGDISLM 100
            FS   Y  S  EN     +L  +  + P +     + Y L +   E FSI    G + L 
Sbjct: 3148 FSSPHYLASVYENAAPKALLTRLQASDPDEGINRTLVYTLVDSVDEFFSIDPVSGMVILE 3207

Query: 101  QCLDYETEDSYRFTVYATDT-----LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIP 155
            + LD E++DSYR  V ATD       +++   + I V++VND  P F+   Y + +P   
Sbjct: 3208 KSLDRESQDSYRLRVQATDQAGQRGALSSQVNLTILVLDVNDNAPVFQRRDYGVTVPE-- 3265

Query: 156  LADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYE-KMFSINDS-GHISIV-DLSALNTS 210
              D+  G+ + +V A   D G    +T  +R   E   F+I+   G I +  DL      
Sbjct: 3266 --DVAVGTEVLRVLATSVDIGLNAEITYRIRSGNELGKFTIDTQLGAIFVADDLDFEVCK 3323

Query: 211  TIQLVVVATDTGNPP 225
               L + A D GNPP
Sbjct: 3324 DYYLTLEAWDGGNPP 3338



 Score = 48.1 bits (113), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 88/180 (48%), Gaps = 13/180 (7%)

Query: 50   YSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGERFSI-SRQGDISLMQCLDY 105
            YS S  E++P+N  +LTV     +      ++Y L     E F + +  G++     +D 
Sbjct: 3051 YSASFPEDMPINKGILTVAATDADSGSSAEIQYSLFGIGVEDFYMDANTGELRSATVMDR 3110

Query: 106  ETEDSYRFTVYATDTL-MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSV 164
            ET  SY+    ATD   +     +++ V++VND  P F  P Y   L  +   +  P ++
Sbjct: 3111 ETTPSYKLIAQATDGGGLFCRCDISLKVLDVNDNAPAFSSPHY---LASV-YENAAPKAL 3166

Query: 165  IGKVEAADGDKGDRVTL--SLRGPYEKMFSINDSGHISIVD--LSALNTSTIQLVVVATD 220
            + +++A+D D+G   TL  +L    ++ FSI+    + I++  L   +  + +L V ATD
Sbjct: 3167 LTRLQASDPDEGINRTLVYTLVDSVDEFFSIDPVSGMVILEKSLDRESQDSYRLRVQATD 3226



 Score = 41.6 bits (96), Expect = 0.57,   Method: Compositional matrix adjust.
 Identities = 59/195 (30%), Positives = 91/195 (46%), Gaps = 23/195 (11%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWL-SNDYGERFSIS-RQGDISLMQC 102
            F K  Y V+  E++ V+  +L +  + P    V + +   D   +F I    G IS++  
Sbjct: 2189 FDKPFYGVTVREDVVVSTSVLGINASSPEGQSVIFTIIDGDPSFQFDIGFDTGTISVIYP 2248

Query: 103  LDYETEDSYRFTVYATDTL--MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLT 160
            LDYET   YR TV ATDTL    +   V++ V++VND  P F+   Y   LP   +    
Sbjct: 2249 LDYETTQYYRLTVKATDTLTGAKSEVDVDVVVLDVNDNPPLFQNTSYSSVLPENSMI--- 2305

Query: 161  PGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSGHISIVDLSA--------LNTSTI 212
             G+ + KV A D D      +S    Y+ +  I +S     +D S+        L+   +
Sbjct: 2306 -GTTVLKVIAQDQDSEKNALVS----YQILSDIYNSTDYFHMDSSSGLIFMARRLDYELV 2360

Query: 213  Q---LVVVATDTGNP 224
            Q    +V ATD+G+P
Sbjct: 2361 QRHNFIVRATDSGDP 2375



 Score = 41.2 bits (95), Expect = 0.91,   Method: Compositional matrix adjust.
 Identities = 38/117 (32%), Positives = 59/117 (50%), Gaps = 11/117 (9%)

Query: 119 DTLMTTSATVNISVVNVNDWDPRFRYPQYELFL-PHIPLADLTPGSVIGKVEAADGDKGD 177
           D +    AT+ I++ + ND  P F  P Y++ +   +PL     G+V+    A D DKG+
Sbjct: 444 DIISQQRATIQITIEDANDNSPAFNKPFYDISINESLPL-----GTVVLVASATDSDKGE 498

Query: 178 R--VTLSLRGPYEKMFSIN-DSGHISIV-DLSALNTSTI-QLVVVATDTGNPPRQAS 229
              VT ++ G     FSI+ ++G I I  DL   ++  I    V A+D G P R+ S
Sbjct: 499 NGFVTHTIAGEMSLPFSIDQNTGEIRITQDLDFESSDDIYSFAVRASDWGAPYRRES 555



 Score = 40.4 bits (93), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 54/200 (27%), Positives = 92/200 (46%), Gaps = 19/200 (9%)

Query: 45   FSKNEYSVSALENLPVNYVLLTV---TTNKPRDLRVKYWL--SNDYGERFSISRQ-GDIS 98
            F + +Y V+  E++ V   +L V   + +   +  + Y +   N+ G +F+I  Q G I 
Sbjct: 3254 FQRRDYGVTVPEDVAVGTEVLRVLATSVDIGLNAEITYRIRSGNELG-KFTIDTQLGAIF 3312

Query: 99   LMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIP 155
            +   LD+E    Y  T+ A D     ++++  V I +++VND  P F    Y + +    
Sbjct: 3313 VADDLDFEVCKDYYLTLEAWDGGNPPLSSATVVTIELMDVNDNAPTFSQDIYNVLVSE-- 3370

Query: 156  LADLTPGSVIGKVEAADGDK--GDRVTLS-LRGPYEKMFSINDSGHISIVD--LSALNTS 210
              D + G ++ +V A D D     R+T S L+G     F I+    I  V+  L     S
Sbjct: 3371 --DASVGQMVTRVSAEDLDSQVNGRITYSILKGDRNNHFWIDPVTGILKVNKRLDRELVS 3428

Query: 211  TIQLVVVATDTGNPPRQASV 230
               L V A D+G+P   ++V
Sbjct: 3429 RYSLSVQAFDSGSPAMSSTV 3448



 Score = 38.1 bits (87), Expect = 7.9,   Method: Compositional matrix adjust.
 Identities = 51/155 (32%), Positives = 72/155 (46%), Gaps = 18/155 (11%)

Query: 53   SALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYG-ERFSISRQ-GDISLMQCLDYET 107
            S  EN      +LTV+    +K RD  ++Y +    G   F+I    G I     LD E+
Sbjct: 1044 SVKENSRAGTSVLTVSAKDDDKGRDGALRYSIKGGNGLGTFTIDEDTGVIYTAGILDCES 1103

Query: 108  EDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSV 164
            +D+Y  TVYATD   T +  S  V I V +VND  P    P Y     H  + + +P  V
Sbjct: 1104 KDAYWLTVYATDRGVTPLFASVEVFIQVEDVNDNAPLTSDPIY-----HPVVMENSPKDV 1158

Query: 165  -IGKVEAADGDKGDRVT-LSLR---GPYEKMFSIN 194
             + +++A D D     + LS R   G  +  FSIN
Sbjct: 1159 SVIRIQAQDPDLTSTPSRLSYRITAGNPQNFFSIN 1193


>gi|363738902|ref|XP_003642091.1| PREDICTED: protocadherin gamma-A2-like [Gallus gallus]
          Length = 988

 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 61/195 (31%), Positives = 91/195 (46%), Gaps = 21/195 (10%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWL---SNDYGERFSISRQ-GDI 97
           FS+  Y+V   E++PV   LLT+T   P D     VKY +   +    + F +  + G I
Sbjct: 394 FSQAVYTVRVPEDVPVGSTLLTITATDPDDGTNADVKYTVKVATEMASKLFHLEAETGAI 453

Query: 98  SLMQCLDYETEDSYRFTVYATDT-LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
            + + LD+E EDSY F V A D   +  +A V+ISV +VND  P          L  I  
Sbjct: 454 KVARNLDFEEEDSYEFEVQARDAGELFDTAKVSISVTDVNDNAPEI---SVRSALSEIS- 509

Query: 157 ADLTPGSVIGKVEAADGDKGD----RVTLSLRGPYEKMFSINDSGHISIV---DLSALNT 209
            D  PG+V+  +   D D G     R +L    P+    +++D  + S+V   +L     
Sbjct: 510 EDAAPGTVVALLHVQDRDSGANGEVRCSLGEGVPFRLERALDD--YYSVVTARELDRERA 567

Query: 210 STIQLVVVATDTGNP 224
           S   + V A D G+P
Sbjct: 568 SEYNVTVRAADGGSP 582


>gi|296472179|tpg|DAA14294.1| TPA: cadherin-23-like [Bos taurus]
          Length = 3354

 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 60/195 (30%), Positives = 89/195 (45%), Gaps = 20/195 (10%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWLSNDYGERFSIS-RQGDISLM 100
            F +  Y  +  E++PV  V+LTVT           ++Y L +  G +F+IS   GDI ++
Sbjct: 2402 FDQLSYQEAVFEDVPVGTVILTVTATDADSGNFALIEYSLVDGEG-KFAISPTTGDIYVL 2460

Query: 101  QCLDYETEDSYRFTVYATDT-------LMTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
              LD E +D Y  T  A D            S  V I V++VND  P+F   Q+   +  
Sbjct: 2461 SSLDREKKDHYILTALAKDNPGDVASNRRENSVQVVIQVLDVNDCRPQFSKLQFSTSV-- 2518

Query: 154  IPLADLTPGSVIGKVEAADGDKGDRVTL--SLRGPYEKMFSIN-DSGHISIVDLSALNTS 210
                +   G+ +  + A D D+G    L  SL GP  + F ++ DSG ++       +  
Sbjct: 2519 --YENEPAGTSVITMMATDQDEGSNAELAYSLEGPGVEAFHVDMDSGLVT-TKRPLQSYE 2575

Query: 211  TIQLVVVATDTGNPP 225
               L VVATD G PP
Sbjct: 2576 RFSLTVVATDGGQPP 2590



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 68/218 (31%), Positives = 101/218 (46%), Gaps = 44/218 (20%)

Query: 45  FSKNEYSVSALENLPVNY-VLLTVTTNKPRDLRVKYWLSNDYGE-----------RFSI- 91
           FSK  Y VS +EN+     VL    T+  R        S +YG+           +F I 
Sbjct: 671 FSKPAYFVSVVENIMAGATVLFLNATDLDR--------SREYGQESIIYSLEGSSQFRIN 722

Query: 92  SRQGDISLMQCLDYETEDSYRFTVYATD-----TLMTTSATVNISVVNVNDWDPRFRYPQ 146
           +R G+I+    LD ET+  Y   V A D        T  ATVNI+++++ND  P ++   
Sbjct: 723 ARSGEITTTSLLDRETKSEYILIVRAVDGGVGHNQKTGIATVNITLLDINDNHPTWKDAP 782

Query: 147 YELFLPHIPLADLT-PGSVIGKVEAADGDKGDRVTL--SLRGPYEKMFSINDS-GHIS-- 200
           Y     +I L ++T P S +  V A D D G+  TL  S++ P  K +S+N S G I   
Sbjct: 783 Y-----YINLVEMTPPDSDVTTVVAVDPDVGENGTLVYSIQPP-NKFYSLNSSTGKIRTT 836

Query: 201 --IVDLSALNTSTIQL----VVVATDTGNPPRQASVPA 232
             ++D    +    +L    +V  TD G PP +A+  A
Sbjct: 837 HVMLDRENPDPHEAELMRKIIVSVTDCGTPPLKATSSA 874



 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 64/205 (31%), Positives = 96/205 (46%), Gaps = 28/205 (13%)

Query: 45  FSKNEYSVSALENLPVNYVLLTV--TTNKPRDL-RVKYWLSNDYGERFSISRQ-GDISLM 100
           FS+  Y+VS  EN+ V   +LTV  T N       V Y+ S+D  +RFS+ +  G I L+
Sbjct: 460 FSQPLYNVSLYENVTVGTSVLTVLATDNDVGTFGEVNYFFSDD-PDRFSLDKDTGLIVLI 518

Query: 101 QCLDYETEDSYRFTVYATDTL-MTTSATVNISVVNVNDWDPRFRYPQYELFL----PHIP 155
             LDYE    +  TV A D     T+  V I+V++VND  P F+   Y   L    P + 
Sbjct: 519 ARLDYELIQRFTLTVIARDGGGEETTGRVRINVLDVNDNVPTFQKDAYVGALRENEPSV- 577

Query: 156 LADLTPGSVIGKVEAADGDK--GDRVTLSL-----RGPYEKMFSINDSGHISI---VDLS 205
                  + + ++ A D D    +++T S+      G Y  +      G IS+   +D  
Sbjct: 578 -------TQLVRLRATDEDSPPNNQITYSIVNASAFGSYFDISVYEGYGVISVSRPLDYE 630

Query: 206 ALNTSTIQLVVVATDTGNPPRQASV 230
            +    I L V+A D GNPP  ++V
Sbjct: 631 QIPNGLIYLTVMAKDAGNPPLNSTV 655



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 62/204 (30%), Positives = 91/204 (44%), Gaps = 25/204 (12%)

Query: 43   LQFSKNEYSVSALENLPVNYVLLTVTTNKPRDL-----RVKYWLSNDYGERFSISR-QGD 96
            +QFS   Y  + LENL +   ++ V      +L     R   + S      F I    G 
Sbjct: 1311 VQFSNASYEAAILENLALGTEIVRVQAYSIDNLNQITYRFDAYTSAQAKALFKIDAITGV 1370

Query: 97   ISLMQCLDYETEDSYRFTVYATDTLMTTSATVN--ISVVNVNDWDPRFRYPQYELFLPHI 154
            I++   +D E  D Y  TV A D      +TV   I+V++ ND  PRF +         +
Sbjct: 1371 ITVKGLVDREKGDFYTLTVVADDGGPKVDSTVKVYITVLDENDNSPRFDFTSDSAI--SV 1428

Query: 155  PLADLTPGSVIGKVEAADGDKGD--RVTLSLR-----GPYEKMFSINDS-GHISI---VD 203
            P  D T G  +  V+A D D G   +V  SL      G +E + + NDS G I +   +D
Sbjct: 1429 P-EDCTVGQRVATVKAQDPDAGSNGQVVFSLAAGNIAGAFE-IVTTNDSIGEIFVARPLD 1486

Query: 204  LSALNTSTIQLVVVATDTGNPPRQ 227
               L+   ++  VVA+D G PPR+
Sbjct: 1487 REELDHYILK--VVASDRGTPPRK 1508



 Score = 43.5 bits (101), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 65/138 (47%), Gaps = 12/138 (8%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVT-TNKPRDL--RVKYWLSNDYGERFSISRQGDISLM- 100
            FS    +V  LEN P  + +L +T T++   L   + Y +     +RF I     I  + 
Sbjct: 2069 FSPAAVTVHLLENCPPGFSVLQITATDEDSGLNGELIYRIEAGAQDRFLIHPVSGIVRVG 2128

Query: 101  -QCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
               +D E ++SYR TV ATD     ++ +A + + + ++ND  P F  P   + +    L
Sbjct: 2129 NATIDREEQESYRLTVVATDRGAVPLSGTAIITVLIDDINDSRPEFLNPIQTVSV----L 2184

Query: 157  ADLTPGSVIGKVEAADGD 174
                PG+VI  V A D D
Sbjct: 2185 ESAEPGTVIANVTAIDRD 2202



 Score = 42.7 bits (99), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 54/199 (27%), Positives = 89/199 (44%), Gaps = 26/199 (13%)

Query: 44  QFSKNEYSVSALENLPVNYVL--LTVTTNKPRDLRV----KYWLSNDYGERF-----SIS 92
           +F+ +EYSV+  E   V + L       +K  +L +    + +L  +    F     S+ 
Sbjct: 347 EFNSSEYSVAITELAQVGFALPLFIQVVDKDENLGLNSMFEVYLVGNNSHHFIISPTSVQ 406

Query: 93  RQGDISLMQC--LDYETEDSYRFTVYATDTL--MTTSATVNISVVNVNDWDPRFRYPQYE 148
            + DI +     LDYET D Y F ++A +++      A V I+++N ND  P F  P Y 
Sbjct: 407 GKADIRIRVAIPLDYETVDRYDFDLFANESVPDHVGYAKVKITLINENDNRPIFSQPLYN 466

Query: 149 LFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDSGHISIVDLSA 206
           + L      ++T G+ +  V A D D G    V        ++     D+G I ++  + 
Sbjct: 467 VSL----YENVTVGTSVLTVLATDNDVGTFGEVNYFFSDDPDRFSLDKDTGLIVLI--AR 520

Query: 207 LNTSTIQ---LVVVATDTG 222
           L+   IQ   L V+A D G
Sbjct: 521 LDYELIQRFTLTVIARDGG 539



 Score = 39.3 bits (90), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 57/204 (27%), Positives = 88/204 (43%), Gaps = 22/204 (10%)

Query: 30  TLIVSKAGTSLRELQFSKNEYSVSAL---ENLPVNYVLLTVTTNKPRDLR---VKYWLSN 83
           ++++S     +  L F  N +  + L   E+ PV     +VT    RD+    + + +S 
Sbjct: 15  SVLISGCWGQVNRLPFFTNHFFDTYLLISEDTPVGS---SVTQLLARDMDNDPLVFGVSG 71

Query: 84  DYGERFSISR--QGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPR 141
           +   RF       G + L Q LD ET+  +      +D     +  VNI V +VND  P 
Sbjct: 72  EEASRFFAVEPDTGVVWLRQPLDRETKSEFTVEFSVSDHQGVITRKVNIQVGDVNDNAPT 131

Query: 142 FRYPQYELFLPHIPLADLTP-GSVIGKVEAADGD--KGDRVTLSLRGPYEKMFSINDSGH 198
           F    Y + +P     + TP G+ I  V A D D   G  V  S + P  + F+++ +  
Sbjct: 132 FHNQPYSVRIP-----ENTPVGTPIFIVNATDPDLGAGGSVLYSFQPP-SQFFAVDSARG 185

Query: 199 ISIV--DLSALNTSTIQLVVVATD 220
           I  V  +L    T   QL V ATD
Sbjct: 186 IVTVIRELDYETTQAYQLTVNATD 209



 Score = 38.9 bits (89), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 65/288 (22%), Positives = 118/288 (40%), Gaps = 65/288 (22%)

Query: 4    EDDFL-QPITLVVRA----IQYDNQDRYALATLIVSKAGTSLR----------ELQFSKN 48
            +D FL  P++ +VR     I  + Q+ Y L  +   +    L           ++  S+ 
Sbjct: 2113 QDRFLIHPVSGIVRVGNATIDREEQESYRLTVVATDRGAVPLSGTAIITVLIDDINDSRP 2172

Query: 49   EY-----SVSALENLPVNYVLLTVTTNKPRDL--RVKYWLSN------------DYGERF 89
            E+     +VS LE+     V+  VT    RDL   ++Y + +            D  + F
Sbjct: 2173 EFLNPIQTVSVLESAEPGTVIANVTAID-RDLNPELEYHIIDIVAKDDTDRLVPDQEDAF 2231

Query: 90   SIS-RQGDISLMQCLDYETEDSYRFTVYATD--------TLMTTSATVNISVVNVNDWDP 140
            +++   G + +   L+ E   +Y  T+   D        ++   +A + +++++VND  P
Sbjct: 2232 AVNINTGSVMVKSPLNRELVATYEVTLSVIDNASDLPERSVSVPNAKLTVNILDVNDNTP 2291

Query: 141  RFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDSGH 198
            +F+      +   I L   TPG+ +  V A D DKG    +T SL        ++   G+
Sbjct: 2292 QFKPFGITYYTERI-LEGATPGTTLIAVAAVDPDKGLNGLITYSL-------LNLMPPGY 2343

Query: 199  ISIVDLSA-----------LNTSTIQLVVVATDTGNPPRQASVPAIMH 235
            + + D SA                +   V A+D G+PPR A +P  + 
Sbjct: 2344 VQLEDSSAGKVIANRTVDYEEVHWLNFTVRASDNGSPPRAAEIPVYLE 2391



 Score = 38.9 bits (89), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 59/236 (25%), Positives = 110/236 (46%), Gaps = 30/236 (12%)

Query: 50   YSVSALENLPVNY--VLLTVT-TNKPRDLRVKYWLSN-DYGERFSIS-RQGDISLMQCLD 104
            Y+VS  E++P  +  V L  T ++   +  + Y+++  +   +FS+  R   +  +  LD
Sbjct: 1000 YNVSVSEDVPREFRVVWLNCTDSDVGLNAELSYFITGGNVDGKFSVGYRDATVRTVVNLD 1059

Query: 105  YETEDSYRFTVYATDT-----LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADL 159
             ET  +Y   + A D        T +ATV ++V++VND  P F    YE  +      D+
Sbjct: 1060 RETTATYTLVLEAIDNGPVGKRRTGTATVFVTVLDVNDNRPIFLQSSYEASVSE----DI 1115

Query: 160  TPGSVIGKVEAADGDKGD--RVTLSL-RGPYEKMFSINDSGHISIVDLSALN---TSTIQ 213
              G  I +++A D D+G+  RV   +  G +   F I+ S  + +     L+    S+  
Sbjct: 1116 PEGHSIVQLKATDADEGEFGRVWYRIVHGNHGNNFRIHVSNGLLMRGPRPLDRERNSSHV 1175

Query: 214  LVVVATDTGNPPRQASVPAIMHFPE------AIVQQASSKLN----SGTSSTVLII 259
            L+V A +    P ++SV  I++  +         QQ  S+L     +G  ++V+++
Sbjct: 1176 LIVEAYNHDLGPMRSSVRVIVYVEDVNDEAPVFTQQQYSRLGLRETTGIGTSVIVV 1231


>gi|348566837|ref|XP_003469208.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 1-like [Cavia
            porcellus]
          Length = 4579

 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 60/210 (28%), Positives = 100/210 (47%), Gaps = 20/210 (9%)

Query: 37   GTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDL----RVKYWLSNDYG-ERFSI 91
            G +L    F +NEY V   EN PV+ +++ V     RD      + Y + ND+  +RF  
Sbjct: 2485 GGNLHSPVFPQNEYEVELAENAPVHTLVIEVKATD-RDSGIYGHITYNIVNDFAKDRFYP 2543

Query: 92   SRQGDISLMQCLDYET--EDSYRFTVYATDTLMTTS-ATVNISVVNVNDWDPRFRYPQYE 148
            + +G I  ++ LD ET  E      + A D     +  T+N+ + + ND  P+FR  +YE
Sbjct: 2544 NERGQIFTLEKLDRETPAEKVISIRLMAKDAGGKVAFCTINVILTDDNDNAPQFRATKYE 2603

Query: 149  LFLPHIPLADLTPGSVIGKVEAADGDKGDR--VTLSLRGPYEKM---FSIND-SGHISIV 202
            + +     ++   G+ + KV A+D D+G    V  ++    E +     IN  +G I+  
Sbjct: 2604 VNIG----SNAAKGTSVIKVFASDADEGSNADVIYAIEADSESVKENLEINKLTGVITTK 2659

Query: 203  D-LSALNTSTIQLVVVATDTGNPPRQASVP 231
            + L  L        V A D G+PP+++ VP
Sbjct: 2660 ESLIGLENEFFTFFVRAVDNGSPPKESVVP 2689



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 44/145 (30%), Positives = 70/145 (48%), Gaps = 8/145 (5%)

Query: 90   SISRQGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYEL 149
            +I  +  + + + LD E +DSY  T+ ATD   ++ A V + V++ ND  P      Y  
Sbjct: 2972 NIQNEWKVYVKKPLDREKKDSYLLTITATDGTFSSKAIVEVKVLDANDNSPVCEKTLYSD 3031

Query: 150  FLPHIPLADLTPGSVIGKVEAADGD--KGDRVTLSLRGPYEKMFSIN-DSGHI-SIVDLS 205
             +P     D  PG +I +V A D D      +T +L G   + F +N D+G + ++  L 
Sbjct: 3032 TIPE----DALPGKLIMQVSATDADIRSNAEITYTLLGSGAEKFRLNPDTGELKTLAPLD 3087

Query: 206  ALNTSTIQLVVVATDTGNPPRQASV 230
                +   L+V ATD G    QAS+
Sbjct: 3088 REEQAVYNLLVKATDGGGRFCQASI 3112



 Score = 55.5 bits (132), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 59/203 (29%), Positives = 98/203 (48%), Gaps = 27/203 (13%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSN-DYGERFSIS-RQGDISLMQC 102
            F K  YS    EN+ V+  ++ +  N P  L+V Y +++ D   +F+I+   G I+++  
Sbjct: 2183 FEKPFYSAEIPENIQVHSPVVHIQANSPEGLKVFYSITDGDPFSQFTINFNTGVINVIAP 2242

Query: 103  LDYETEDSYRFTVYATDTLMTTSATVNISVV--NVNDWDPRFRYPQYELFLPHIPLADLT 160
            LD+E+  +Y+ ++ ATD+L    A V + ++  ++ND  P F    Y         A L+
Sbjct: 2243 LDFESHPAYKLSIRATDSLTGAHAEVFVDIIVEDINDNPPVFVQQSYS--------ATLS 2294

Query: 161  PGSVIG----KVEAADGDK--GDRVTLSLRGPYEK---MFSIND-SGHISIVDLSALNTS 210
              SVIG    +V A D D      ++  + G + K    F I+  +G IS+  L  L+  
Sbjct: 2295 EASVIGTSVVQVRATDSDSEPNRGISYQMFGNHSKSHDHFHIDSTTGLISL--LRTLDYE 2352

Query: 211  TIQ---LVVVATDTGNPPRQASV 230
              Q   + V A D G PP  + V
Sbjct: 2353 QFQQHKIFVRAIDGGMPPLSSDV 2375



 Score = 55.5 bits (132), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 38/156 (24%), Positives = 75/156 (48%), Gaps = 11/156 (7%)

Query: 33   VSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWL---SNDYGERF 89
            +SK       + F ++ ++ + +E+ PV +++  ++   P       W      ++   F
Sbjct: 1347 ISKPKPPPEPISFEESVFTFTVMESDPVAHMIGVISVEPPG---TPLWFDITGGNFDSHF 1403

Query: 90   SISR-QGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYE 148
             + +  G I + + LD E + +Y  TV ATD   T    V I V++ ND  P+F   +YE
Sbjct: 1404 DVDKGTGTIIVAKPLDAEQKSNYNLTVEATDGTTTILTQVLIKVIDTNDHRPQFSTSKYE 1463

Query: 149  LFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR 184
            + +P     D  P + I ++ A D D+ +++  +L+
Sbjct: 1464 VVIPE----DTAPETEILQIRAVDKDEKNKLIYTLQ 1495



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 75/295 (25%), Positives = 134/295 (45%), Gaps = 31/295 (10%)

Query: 12   TLVVRAIQYDNQDRY-ALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTN 70
            TL ++A+      R  A  T+IVS    +     F   EY  +  E++ +   +L +   
Sbjct: 3197 TLTLKAVDQGLPRRLSATGTVIVSVLDINDNPPVFEYREYGATVSEDVLIGTEVLQLYAA 3256

Query: 71   KPRDLRVKYWLS------NDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDT--- 120
              RD+     ++      N++G +FSI ++ G I +++ LDYE+   Y  TV ATD    
Sbjct: 3257 S-RDIEANAEITYSIISGNEHG-KFSIDAKTGAIFIIENLDYESAHEYYLTVEATDGGTP 3314

Query: 121  LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVT 180
             ++   TVNI+V ++ND  P F    Y   +    + + +  +V+   + ADG     + 
Sbjct: 3315 SLSDVVTVNINVTDINDNTPAFSQDTYTAVISEDAVLEQSVITVMA--DDADGPLYSLIH 3372

Query: 181  LS-LRGPYEKMFSIND-SGHISIVDLSALNTSTIQ---LVVVATDTGNPPRQASVPAIMH 235
             S + G     F+I+   G + +  L  L+  TI    L + A+D G+PPR  +    + 
Sbjct: 3373 YSIIEGNQGGPFTIDPVKGEVKVTKL--LDRETISGYTLTIQASDNGSPPRVNTTTVNID 3430

Query: 236  FPEAIVQQASSKLNSGTSSTVLIILGVVLIVLGFVIILLILYIHKNKHTKNNGPP 290
              +  V   +   + G  S ++     V    GF ++ L++    +K + +NGPP
Sbjct: 3431 VSD--VNDNAPLFSKGNYSVIIQENKPV----GFSVLQLVV---TDKDSSHNGPP 3476



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 59/225 (26%), Positives = 106/225 (47%), Gaps = 19/225 (8%)

Query: 13   LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKP 72
            L+V+A   D   R+  A+++++    +    +F+ + Y+++  EN     +L  V     
Sbjct: 3096 LLVKAT--DGGGRFCQASIVLTLEDVNDNAPEFTADPYTITVFENTEPGTLLTRVQATDA 3153

Query: 73   R---DLRVKYWLSNDYGERFSISR-QGDISLMQCLDYETEDSYRFTVYATDT----LMTT 124
                + ++ Y L +    +FSI+   G I L + LD E +  Y  T+ A D      ++ 
Sbjct: 3154 DTGLNRKISYSLIDSANGQFSINDISGIIQLEKPLDREQQAVYTLTLKAVDQGLPRRLSA 3213

Query: 125  SATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAA--DGDKGDRVTLS 182
            + TV +SV+++ND  P F Y +Y   +      D+  G+ + ++ AA  D +    +T S
Sbjct: 3214 TGTVIVSVLDINDNPPVFEYREYGATVSE----DVLIGTEVLQLYAASRDIEANAEITYS 3269

Query: 183  -LRGPYEKMFSIN-DSGHISIVD-LSALNTSTIQLVVVATDTGNP 224
             + G     FSI+  +G I I++ L   +     L V ATD G P
Sbjct: 3270 IISGNEHGKFSIDAKTGAIFIIENLDYESAHEYYLTVEATDGGTP 3314



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 64/253 (25%), Positives = 108/253 (42%), Gaps = 58/253 (22%)

Query: 4    EDDFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNY- 62
            E++F    T  VRA+   +  + ++  + V          +FS+  Y+ +  E++P+   
Sbjct: 2666 ENEFF---TFFVRAVDNGSPPKESVVPVYVKILPPERHLPKFSEPFYTYTVSEDMPIGTE 2722

Query: 63   -----------VLLTVTT-NKPRDLRVKYWLSNDYGERFSISRQ-GDISLMQCLDYETED 109
                       VL ++T  N P   R ++         F I RQ G + L + LD+ET  
Sbjct: 2723 IDLIRAEHSGTVLYSLTKGNTPESNRDEF---------FVIDRQSGRLKLEKSLDHETTK 2773

Query: 110  SYRFTVYAT----DTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVI 165
             Y+F++ A     D  +  S  V+I V + ND  P      YE F+    + +L  GS +
Sbjct: 2774 WYQFSILARCTQDDYEVVASVDVSIQVKDANDNSPVLESNPYEAFI----VENLPGGSRV 2829

Query: 166  GKVEAADGDKGDRVTLSLRGPYEKMFSINDSGHISIVDLSALNTST-------------- 211
             ++ A+D D G      L G    M+S++ S  + I++  A+N  T              
Sbjct: 2830 IQIRASDLDSG------LNG--HVMYSLDQSQSVDIIESFAINAETGWITTLKELDHEER 2881

Query: 212  --IQLVVVATDTG 222
               Q+ VVA+D G
Sbjct: 2882 DNYQIKVVASDHG 2894



 Score = 45.8 bits (107), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 44/165 (26%), Positives = 76/165 (46%), Gaps = 10/165 (6%)

Query: 76   RVKYWLSNDYGERFSIS-RQGDISLMQCLDYETEDSYRFTVYATDTL-MTTSATVNISVV 133
             + Y L     E+F ++   G++  +  LD E +  Y   V ATD       A++ +++ 
Sbjct: 3058 EITYTLLGSGAEKFRLNPDTGELKTLAPLDREEQAVYNLLVKATDGGGRFCQASIVLTLE 3117

Query: 134  NVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMF 191
            +VND  P F    Y + +      +  PG+++ +V+A D D G   +++ SL       F
Sbjct: 3118 DVNDNAPEFTADPYTITV----FENTEPGTLLTRVQATDADTGLNRKISYSLIDSANGQF 3173

Query: 192  SIND-SGHISIVD-LSALNTSTIQLVVVATDTGNPPRQASVPAIM 234
            SIND SG I +   L     +   L + A D G P R ++   ++
Sbjct: 3174 SINDISGIIQLEKPLDREQQAVYTLTLKAVDQGLPRRLSATGTVI 3218



 Score = 42.7 bits (99), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 54/195 (27%), Positives = 87/195 (44%), Gaps = 20/195 (10%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTTNKPRDL----RVKYWLSNDYGERFSI-SRQGDIS 98
            +F +  Y V   E+  +N  ++ V     +DL     V Y +  D  ++FSI S  G + 
Sbjct: 822  EFLQESYFVEVSEDKEINSEIIQVEATD-KDLGSNGHVTYSILTD-TDKFSIDSITGVVK 879

Query: 99   LMQCLDYETEDSYRFTVYATDTL-----MTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
            ++  LD E +  +   + A D       + ++  + +S+ +VND  P+F  P Y + +  
Sbjct: 880  VVHPLDREVQHVHYLKIEARDQAKEELQLFSTVLLKVSLEDVNDNPPKFIPPNYRVKV-- 937

Query: 154  IPLADLTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSIND-SGHISIV-DLSALNT 209
                DL  G++I  +EA D D G   +V  SL    E  F ++  SG + IV  L     
Sbjct: 938  --REDLPEGTIIMWLEAYDPDVGQSSQVRYSLLDHGEGNFDVDKLSGAVRIVQQLDFERK 995

Query: 210  STIQLVVVATDTGNP 224
                L V A D G P
Sbjct: 996  QVYNLTVRAKDKGKP 1010



 Score = 42.4 bits (98), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 54/191 (28%), Positives = 85/191 (44%), Gaps = 30/191 (15%)

Query: 56   ENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYG-ERFSISRQ-GDISLMQCLDYETEDS 110
            E++P+   ++TV+    +  RD  ++Y + +  G   F I  + G I     LD E+   
Sbjct: 1046 EDVPIGSSVMTVSARDEDTGRDGEIRYSIRDGSGVGVFKIDEETGVIETSDRLDRESTSH 1105

Query: 111  YRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSV-IG 166
            Y  TVYATD     +++   + I V +VND  P+   P   ++ P I   + +P  V + 
Sbjct: 1106 YWLTVYATDQGVVPLSSFIEIYIEVEDVNDNAPQTSEP---VYYPEI--MENSPKDVSVV 1160

Query: 167  KVEAADGDKGDRVTLSLRGPYEKMFSINDSGHISIVDLSALNTSTIQ-----------LV 215
            ++EA D D      L       K+ S N  G  SI   + L T+T +           L 
Sbjct: 1161 QIEAFDPDSSSNDKLMY-----KITSGNPQGFFSIHPKTGLITTTSRRLDREQQDEHILE 1215

Query: 216  VVATDTGNPPR 226
            V  TD G PP+
Sbjct: 1216 VTVTDNGTPPK 1226



 Score = 42.0 bits (97), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 43/161 (26%), Positives = 71/161 (44%), Gaps = 12/161 (7%)

Query: 45   FSKNEYSVSALENLPVNY-VLLTVTTNKPRDLRVKYWL----SNDYGERFSISRQGDISL 99
            FSK  YSV   EN PV + VL  V T+K        +     S +    F +++QG +  
Sbjct: 3441 FSKGNYSVIIQENKPVGFSVLQLVVTDKDSSHNGPPFFFSIVSGNDDRVFEVNQQGVLLT 3500

Query: 100  MQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
               +  + +D Y   V   D     +++   ++I V+  +   P       E+F+     
Sbjct: 3501 SAAIQRKVKDHYLLHVKVADNGKPQLSSLTHIDIRVIEESIHPPAIL--PLEIFI--TAF 3556

Query: 157  ADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSG 197
             +   G VIGK+ A D D  D +T SL    + +FS++ +G
Sbjct: 3557 GEEYSGGVIGKIHATDQDVYDTLTYSLDPQMDNLFSVSSTG 3597



 Score = 37.7 bits (86), Expect = 9.3,   Method: Compositional matrix adjust.
 Identities = 62/237 (26%), Positives = 96/237 (40%), Gaps = 20/237 (8%)

Query: 28   LATLIVSKAGTSLRELQFSKNEYSVSALEN-LPVNYVLLTVTTNKPRDLRVKYWLSNDYG 86
            L  +++    T+    QFS ++Y V   E+  P   +L     +K    ++ Y L +   
Sbjct: 1440 LTQVLIKVIDTNDHRPQFSTSKYEVVIPEDTAPETEILQIRAVDKDEKNKLIYTLQSSID 1499

Query: 87   ----ERFSIS-RQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDW 138
                ++F +    G +S  + LD+E    +  TV   D    +    A + ++V + ND 
Sbjct: 1500 PLSLKKFRLDPATGSLSTCEKLDHEAVHQHILTVMVRDQDVPVKRNFARIIVNVSDTNDH 1559

Query: 139  DPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGD--RVTLSLR-GPYEKMFSIND 195
             P F    YE  +          GSV+ +V A D DKG    V  S+  G     F+I+ 
Sbjct: 1560 APWFTSSSYEGRV----YESAAVGSVVLQVTALDKDKGKNAEVVYSIESGNIGNSFTIDP 1615

Query: 196  S-GHISIV-DLSALNTSTIQLVVVATDTGNPPRQASVPAIMHFPEAIVQQASSKLNS 250
              G I    +L   +     L+V A D GNPP   S    +H    I   AS K  S
Sbjct: 1616 ILGSIKTAKELDRSHQEEYDLMVKAADKGNPP--MSEMTSVHIFVTIADNASPKFTS 1670


>gi|344275015|ref|XP_003409309.1| PREDICTED: protocadherin-15 isoform 3 [Loxodonta africana]
          Length = 1940

 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 67/242 (27%), Positives = 112/242 (46%), Gaps = 29/242 (11%)

Query: 6   DFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVL- 64
           DF Q   LV++A Q +     A A+L +     + +   F+   Y    LE+ PV   + 
Sbjct: 356 DFHQKFDLVIKAEQDNGHPLPAFASLHIEILDENNQSPYFTMPAYQGYILESAPVGSTIS 415

Query: 65  --LTVTT-----------NKPRDLRVKYWLSNDYGERFSISRQG---DISLMQCLDYETE 108
             L +TT              +D  V  +L NDY   F++++ G    ++L+Q +D E +
Sbjct: 416 DSLNLTTPLRIIVLDKDVEDTKDPEVHLFL-NDYTSVFTVTQTGITRYLTLLQPVDREEQ 474

Query: 109 DSYRFTVYATDTLMTTSAT-VNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGK 167
            +Y F++ A D +  +    VNI V++ ND  P F    YE+++      D++PG  + +
Sbjct: 475 QTYTFSITAFDGVQESEPVIVNIQVMDANDNTPTFPEISYEVYV----YTDMSPGDSVIQ 530

Query: 168 VEAADGDKGD--RVTLSLRGPYEKMFSIND-SGHISIV-DLSALNTSTIQLVVVATDTGN 223
           + A D D+G    +T  +    +  F IN  +G I+I   +  +   T  L V A D  N
Sbjct: 531 LTAVDADEGSNGEITYEILVGDQGDFIINKTTGLITIAPGVELIVGRTYALTVQAAD--N 588

Query: 224 PP 225
           PP
Sbjct: 589 PP 590



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 70/233 (30%), Positives = 102/233 (43%), Gaps = 26/233 (11%)

Query: 13   LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKP 72
            LVV A       R++  TL +           F+ + Y+V   ENLP     L +   K 
Sbjct: 787  LVVVATDGAVHPRHSTLTLAIKVLDIDDNSPVFTNSTYTVVVEENLPAGTTFLKIEA-KD 845

Query: 73   RDL--RVKYWLSNDYGERFSISR--QGDISLMQCLDYET----EDSYRFTVYATD---TL 121
             DL   V Y + +   + F       G++SL++ LDYE     E +  F V A D   T+
Sbjct: 846  VDLGANVSYRIRSPEVKHFFALHPFTGELSLLRSLDYEAFPEQEATITFLVEAFDIYGTM 905

Query: 122  MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDK----GD 177
                ATV + V ++ND+ P F    Y+  +      D   G+ I  V A D D       
Sbjct: 906  PPGIATVTVIVKDMNDYPPVFNKRIYKGMV----APDAVKGTPITTVYAEDADPPGLPAS 961

Query: 178  RVTL---SLRGPY-EKMFSI-NDSGH-ISIVDLSALNTSTIQLVVVATDTGNP 224
            RV      ++ PY   +F +  DSG  I+ V+L+   T+  +LVVVA D G P
Sbjct: 962  RVRYRVDDVQFPYPASIFDVVEDSGLVITRVNLNEEPTTIFKLVVVAFDDGEP 1014



 Score = 46.6 bits (109), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 53/193 (27%), Positives = 94/193 (48%), Gaps = 10/193 (5%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGER-FSISRQ-GDISLMQ 101
           +F +  YS+   E + +  VLL +         + Y + N   +R F++S   G ++L +
Sbjct: 615 RFPQLMYSLEISEAMRIGAVLLNLQATDREGDPITYAIENGDPQRVFNLSENTGILTLGK 674

Query: 102 CLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLP-HIPLADLT 160
            LD E+ D Y   V A+D     ++T  ++VV  +        P ++ +LP ++ + +  
Sbjct: 675 ALDRESTDRYILIVTASDGRPDGTSTATVNVVVTDV---NDNAPVFDPYLPRNLSVVEEE 731

Query: 161 PGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDSGHI-SIVDLSALNTSTIQLVVV 217
             + +G+V A D D G   +V  SL G +  +F I  +G I + V L+       +LVVV
Sbjct: 732 ANAFVGQVRATDPDAGINGQVHYSL-GNFNNLFRITSNGSIYTAVKLNREVRDYYELVVV 790

Query: 218 ATDTGNPPRQASV 230
           ATD    PR +++
Sbjct: 791 ATDGAVHPRHSTL 803



 Score = 45.8 bits (107), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 50/171 (29%), Positives = 80/171 (46%), Gaps = 17/171 (9%)

Query: 76  RVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDTLMT---TSATVNISV 132
           +V Y L N +   F I+  G I     L+ E  D Y   V ATD  +    ++ T+ I V
Sbjct: 751 QVHYSLGN-FNNLFRITSNGSIYTAVKLNREVRDYYELVVVATDGAVHPRHSTLTLAIKV 809

Query: 133 VNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEK-MF 191
           ++++D  P F    Y + +      +L  G+   K+EA D D G  V+  +R P  K  F
Sbjct: 810 LDIDDNSPVFTNSTYTVVVEE----NLPAGTTFLKIEAKDVDLGANVSYRIRSPEVKHFF 865

Query: 192 SIND-SGHISI---VDLSAL--NTSTIQLVVVATDTGN--PPRQASVPAIM 234
           +++  +G +S+   +D  A     +TI  +V A D     PP  A+V  I+
Sbjct: 866 ALHPFTGELSLLRSLDYEAFPEQEATITFLVEAFDIYGTMPPGIATVTVIV 916


>gi|300794778|ref|NP_001178135.1| cadherin-23 precursor [Bos taurus]
          Length = 3354

 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 60/195 (30%), Positives = 89/195 (45%), Gaps = 20/195 (10%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWLSNDYGERFSIS-RQGDISLM 100
            F +  Y  +  E++PV  V+LTVT           ++Y L +  G +F+IS   GDI ++
Sbjct: 2402 FDQLSYQEAVFEDVPVGTVILTVTATDADSGNFALIEYSLVDGEG-KFAISPTTGDIYVL 2460

Query: 101  QCLDYETEDSYRFTVYATDT-------LMTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
              LD E +D Y  T  A D            S  V I V++VND  P+F   Q+   +  
Sbjct: 2461 SSLDREKKDHYILTALAKDNPGDVASNRRENSVQVVIQVLDVNDCRPQFSKLQFSTSV-- 2518

Query: 154  IPLADLTPGSVIGKVEAADGDKGDRVTL--SLRGPYEKMFSIN-DSGHISIVDLSALNTS 210
                +   G+ +  + A D D+G    L  SL GP  + F ++ DSG ++       +  
Sbjct: 2519 --YENEPAGTSVITMMATDQDEGSNAELAYSLEGPGVEAFHVDMDSGLVT-TKRPLQSYE 2575

Query: 211  TIQLVVVATDTGNPP 225
               L VVATD G PP
Sbjct: 2576 RFSLTVVATDGGQPP 2590



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 68/218 (31%), Positives = 101/218 (46%), Gaps = 44/218 (20%)

Query: 45  FSKNEYSVSALENLPVNY-VLLTVTTNKPRDLRVKYWLSNDYGE-----------RFSI- 91
           FSK  Y VS +EN+     VL    T+  R        S +YG+           +F I 
Sbjct: 671 FSKPAYFVSVVENIMAGATVLFLNATDLDR--------SREYGQESIIYSLEGSSQFRIN 722

Query: 92  SRQGDISLMQCLDYETEDSYRFTVYATD-----TLMTTSATVNISVVNVNDWDPRFRYPQ 146
           +R G+I+    LD ET+  Y   V A D        T  ATVNI+++++ND  P ++   
Sbjct: 723 ARSGEITTTSLLDRETKSEYILIVRAVDGGVGHNQKTGIATVNITLLDINDNHPTWKDAP 782

Query: 147 YELFLPHIPLADLT-PGSVIGKVEAADGDKGDRVTL--SLRGPYEKMFSINDS-GHIS-- 200
           Y     +I L ++T P S +  V A D D G+  TL  S++ P  K +S+N S G I   
Sbjct: 783 Y-----YINLVEMTPPDSDVTTVVAVDPDVGENGTLVYSIQPP-NKFYSLNSSTGKIRTT 836

Query: 201 --IVDLSALNTSTIQL----VVVATDTGNPPRQASVPA 232
             ++D    +    +L    +V  TD G PP +A+  A
Sbjct: 837 HVMLDRENPDPHEAELMRKIIVSVTDCGTPPLKATSSA 874



 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 64/205 (31%), Positives = 96/205 (46%), Gaps = 28/205 (13%)

Query: 45  FSKNEYSVSALENLPVNYVLLTV--TTNKPRDL-RVKYWLSNDYGERFSISRQ-GDISLM 100
           FS+  Y+VS  EN+ V   +LTV  T N       V Y+ S+D  +RFS+ +  G I L+
Sbjct: 460 FSQPLYNVSLYENVTVGTSVLTVLATDNDVGTFGEVNYFFSDD-PDRFSLDKDTGLIVLI 518

Query: 101 QCLDYETEDSYRFTVYATDTL-MTTSATVNISVVNVNDWDPRFRYPQYELFL----PHIP 155
             LDYE    +  TV A D     T+  V I+V++VND  P F+   Y   L    P + 
Sbjct: 519 ARLDYELIQRFTLTVIARDGGGEETTGRVRINVLDVNDNVPTFQKDAYVGALRENEPSV- 577

Query: 156 LADLTPGSVIGKVEAADGDK--GDRVTLSL-----RGPYEKMFSINDSGHISI---VDLS 205
                  + + ++ A D D    +++T S+      G Y  +      G IS+   +D  
Sbjct: 578 -------TQLVRLRATDEDSPPNNQITYSIVNASAFGSYFDISVYEGYGVISVSRPLDYE 630

Query: 206 ALNTSTIQLVVVATDTGNPPRQASV 230
            +    I L V+A D GNPP  ++V
Sbjct: 631 QIPNGLIYLTVMAKDAGNPPLNSTV 655



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 62/204 (30%), Positives = 91/204 (44%), Gaps = 25/204 (12%)

Query: 43   LQFSKNEYSVSALENLPVNYVLLTVTTNKPRDL-----RVKYWLSNDYGERFSISR-QGD 96
            +QFS   Y  + LENL +   ++ V      +L     R   + S      F I    G 
Sbjct: 1311 VQFSNASYEAAILENLALGTEIVRVQAYSIDNLNQITYRFDAYTSAQAKALFKIDAITGV 1370

Query: 97   ISLMQCLDYETEDSYRFTVYATDTLMTTSATVN--ISVVNVNDWDPRFRYPQYELFLPHI 154
            I++   +D E  D Y  TV A D      +TV   I+V++ ND  PRF +         +
Sbjct: 1371 ITVKGLVDREKGDFYTLTVVADDGGPKVDSTVKVYITVLDENDNSPRFDFTSDSAI--SV 1428

Query: 155  PLADLTPGSVIGKVEAADGDKGD--RVTLSLR-----GPYEKMFSINDS-GHISI---VD 203
            P  D T G  +  V+A D D G   +V  SL      G +E + + NDS G I +   +D
Sbjct: 1429 P-EDCTVGQRVATVKAQDPDAGSNGQVVFSLAAGNIAGAFE-IVTTNDSIGEIFVARPLD 1486

Query: 204  LSALNTSTIQLVVVATDTGNPPRQ 227
               L+   ++  VVA+D G PPR+
Sbjct: 1487 REELDHYILK--VVASDRGTPPRK 1508



 Score = 43.5 bits (101), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 65/138 (47%), Gaps = 12/138 (8%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVT-TNKPRDL--RVKYWLSNDYGERFSISRQGDISLM- 100
            FS    +V  LEN P  + +L +T T++   L   + Y +     +RF I     I  + 
Sbjct: 2069 FSPAAVTVHLLENCPPGFSVLQITATDEDSGLNGELIYRIEAGAQDRFLIHPVSGIVRVG 2128

Query: 101  -QCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
               +D E ++SYR TV ATD     ++ +A + + + ++ND  P F  P   + +    L
Sbjct: 2129 NATIDREEQESYRLTVVATDRGAVPLSGTAIITVLIDDINDSRPEFLNPIQTVSV----L 2184

Query: 157  ADLTPGSVIGKVEAADGD 174
                PG+VI  V A D D
Sbjct: 2185 ESAEPGTVIANVTAIDRD 2202



 Score = 42.7 bits (99), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 54/199 (27%), Positives = 89/199 (44%), Gaps = 26/199 (13%)

Query: 44  QFSKNEYSVSALENLPVNYVL--LTVTTNKPRDLRV----KYWLSNDYGERF-----SIS 92
           +F+ +EYSV+  E   V + L       +K  +L +    + +L  +    F     S+ 
Sbjct: 347 EFNSSEYSVAITELAQVGFALPLFIQVVDKDENLGLNSMFEVYLVGNNSHHFIISPTSVQ 406

Query: 93  RQGDISLMQC--LDYETEDSYRFTVYATDTL--MTTSATVNISVVNVNDWDPRFRYPQYE 148
            + DI +     LDYET D Y F ++A +++      A V I+++N ND  P F  P Y 
Sbjct: 407 GKADIRIRVAIPLDYETVDRYDFDLFANESVPDHVGYAKVKITLINENDNRPIFSQPLYN 466

Query: 149 LFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDSGHISIVDLSA 206
           + L      ++T G+ +  V A D D G    V        ++     D+G I ++  + 
Sbjct: 467 VSL----YENVTVGTSVLTVLATDNDVGTFGEVNYFFSDDPDRFSLDKDTGLIVLI--AR 520

Query: 207 LNTSTIQ---LVVVATDTG 222
           L+   IQ   L V+A D G
Sbjct: 521 LDYELIQRFTLTVIARDGG 539



 Score = 39.3 bits (90), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 57/204 (27%), Positives = 88/204 (43%), Gaps = 22/204 (10%)

Query: 30  TLIVSKAGTSLRELQFSKNEYSVSAL---ENLPVNYVLLTVTTNKPRDLR---VKYWLSN 83
           ++++S     +  L F  N +  + L   E+ PV     +VT    RD+    + + +S 
Sbjct: 15  SVLISGCWGQVNRLPFFTNHFFDTYLLISEDTPVGS---SVTQLLARDMDNDPLVFGVSG 71

Query: 84  DYGERFSISR--QGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPR 141
           +   RF       G + L Q LD ET+  +      +D     +  VNI V +VND  P 
Sbjct: 72  EEASRFFAVEPDTGVVWLRQPLDRETKSEFTVEFSVSDHQGVITRKVNIQVGDVNDNAPT 131

Query: 142 FRYPQYELFLPHIPLADLTP-GSVIGKVEAADGD--KGDRVTLSLRGPYEKMFSINDSGH 198
           F    Y + +P     + TP G+ I  V A D D   G  V  S + P  + F+++ +  
Sbjct: 132 FHNQPYSVRIP-----ENTPVGTPIFIVNATDPDLGAGGSVLYSFQPP-SQFFAVDSARG 185

Query: 199 ISIV--DLSALNTSTIQLVVVATD 220
           I  V  +L    T   QL V ATD
Sbjct: 186 IVTVIRELDYETTQAYQLTVNATD 209



 Score = 38.9 bits (89), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 65/288 (22%), Positives = 118/288 (40%), Gaps = 65/288 (22%)

Query: 4    EDDFL-QPITLVVRA----IQYDNQDRYALATLIVSKAGTSLR----------ELQFSKN 48
            +D FL  P++ +VR     I  + Q+ Y L  +   +    L           ++  S+ 
Sbjct: 2113 QDRFLIHPVSGIVRVGNATIDREEQESYRLTVVATDRGAVPLSGTAIITVLIDDINDSRP 2172

Query: 49   EY-----SVSALENLPVNYVLLTVTTNKPRDL--RVKYWLSN------------DYGERF 89
            E+     +VS LE+     V+  VT    RDL   ++Y + +            D  + F
Sbjct: 2173 EFLNPIQTVSVLESAEPGTVIANVTAID-RDLNPELEYHIIDIVAKDDTDRLVPDQEDAF 2231

Query: 90   SIS-RQGDISLMQCLDYETEDSYRFTVYATD--------TLMTTSATVNISVVNVNDWDP 140
            +++   G + +   L+ E   +Y  T+   D        ++   +A + +++++VND  P
Sbjct: 2232 AVNINTGSVMVKSPLNRELVATYEVTLSVIDNASDLPERSVSVPNAKLTVNILDVNDNTP 2291

Query: 141  RFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDSGH 198
            +F+      +   I L   TPG+ +  V A D DKG    +T SL        ++   G+
Sbjct: 2292 QFKPFGITYYTERI-LEGATPGTTLIAVAAVDPDKGLNGLITYSL-------LNLMPPGY 2343

Query: 199  ISIVDLSA-----------LNTSTIQLVVVATDTGNPPRQASVPAIMH 235
            + + D SA                +   V A+D G+PPR A +P  + 
Sbjct: 2344 VQLEDSSAGKVIANRTVDYEEVHWLNFTVRASDNGSPPRAAEIPVYLE 2391



 Score = 38.9 bits (89), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 59/236 (25%), Positives = 110/236 (46%), Gaps = 30/236 (12%)

Query: 50   YSVSALENLPVNY--VLLTVT-TNKPRDLRVKYWLSN-DYGERFSIS-RQGDISLMQCLD 104
            Y+VS  E++P  +  V L  T ++   +  + Y+++  +   +FS+  R   +  +  LD
Sbjct: 1000 YNVSVSEDVPREFRVVWLNCTDSDVGLNAELSYFITGGNVDGKFSVGYRDATVRTVVNLD 1059

Query: 105  YETEDSYRFTVYATDT-----LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADL 159
             ET  +Y   + A D        T +ATV ++V++VND  P F    YE  +      D+
Sbjct: 1060 RETTATYTLVLEAIDNGPVGKRRTGTATVFVTVLDVNDNRPIFLQSSYEASVSE----DI 1115

Query: 160  TPGSVIGKVEAADGDKGD--RVTLSL-RGPYEKMFSINDSGHISIVDLSALN---TSTIQ 213
              G  I +++A D D+G+  RV   +  G +   F I+ S  + +     L+    S+  
Sbjct: 1116 PEGHSIVQLKATDADEGEFGRVWYRIVHGNHGNNFRIHVSNGLLMRGPRPLDRERNSSHV 1175

Query: 214  LVVVATDTGNPPRQASVPAIMHFPE------AIVQQASSKLN----SGTSSTVLII 259
            L+V A +    P ++SV  I++  +         QQ  S+L     +G  ++V+++
Sbjct: 1176 LIVEAYNHDLGPMRSSVRVIVYVEDVNDEAPVFTQQQYSRLGLRETTGIGTSVIVV 1231


>gi|410056704|ref|XP_003954078.1| PREDICTED: protocadherin-11 X-linked-like [Pan troglodytes]
          Length = 1347

 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 63/195 (32%), Positives = 93/195 (47%), Gaps = 20/195 (10%)

Query: 45  FSKNEYSVSALENLPVNYV--LLTVTTNKPRDLRVKYWLSNDYGERFSISRQ-GDISLMQ 101
           F+ NEY+    ENLP +    L+TVT     D         D  + F+I  Q G I    
Sbjct: 570 FTHNEYNFYVPENLPRHGTVGLITVTDPDYGDNSAVTLSILDENDDFTIDSQTGVIRPNI 629

Query: 102 CLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYP----QYELFLPHI 154
             D E ++SY F V A D      ++SA V I+VV+VND  P F  P     YEL LP  
Sbjct: 630 SFDREKQESYTFYVKAEDGGRVSRSSSAKVTINVVDVNDNKPVFIVPPSNYSYELVLP-- 687

Query: 155 PLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-DSGHISIVDLSALNTS 210
                 PG+V+ +V A D D G    +    + G    +F+I+ ++G+I++++   +   
Sbjct: 688 ---STNPGTVVFQVMAVDNDTGMNAEVRYSIVGGNTRDLFAIDQETGNITLMEKCDVTDL 744

Query: 211 TIQLVVV-ATDTGNP 224
            +  V+V A D G P
Sbjct: 745 GLHRVLVKANDLGQP 759



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/114 (32%), Positives = 61/114 (53%), Gaps = 10/114 (8%)

Query: 76  RVKYWLSNDYGERFSISRQ-GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNIS 131
            + Y L  D    FS+ R+ G +++++ LD E ED Y FT+ A D     +T++ TV +S
Sbjct: 500 EINYLLGPDAPPEFSLDRRTGMLTVVKKLDREKEDKYLFTILAKDNGVPPLTSNVTVFVS 559

Query: 132 VVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDR--VTLSL 183
           +++ ND  P F + +Y  ++P     +L     +G +   D D GD   VTLS+
Sbjct: 560 IIDQNDNSPVFTHNEYNFYVPE----NLPRHGTVGLITVTDPDYGDNSAVTLSI 609



 Score = 38.1 bits (87), Expect = 8.1,   Method: Compositional matrix adjust.
 Identities = 36/139 (25%), Positives = 67/139 (48%), Gaps = 15/139 (10%)

Query: 103 LDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADL 159
           LD E +D+Y   V   D      +++A + +SV + ND  P F+  + E+ +P     + 
Sbjct: 207 LDREEKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVFKETEIEVSIPE----NA 262

Query: 160 TPGSVIGKVEAADGDKGDRVTLS------LRGPYEKMFSIN-DSGHISIVD-LSALNTST 211
             G+ + ++ A D D G+   +       +     ++F +N  +G I+I + L    T  
Sbjct: 263 PVGTSVTQLHATDADIGENAKIHFSFSNLVSNIARRLFHLNATTGLITIKEPLDREETPN 322

Query: 212 IQLVVVATDTGNPPRQASV 230
            +L+V+A+D G  P +A V
Sbjct: 323 HKLLVLASDGGLMPARAMV 341


>gi|344275019|ref|XP_003409311.1| PREDICTED: protocadherin-15 isoform 5 [Loxodonta africana]
          Length = 1935

 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 67/242 (27%), Positives = 112/242 (46%), Gaps = 29/242 (11%)

Query: 6   DFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVL- 64
           DF Q   LV++A Q +     A A+L +     + +   F+   Y    LE+ PV   + 
Sbjct: 356 DFHQKFDLVIKAEQDNGHPLPAFASLHIEILDENNQSPYFTMPAYQGYILESAPVGSTIS 415

Query: 65  --LTVTT-----------NKPRDLRVKYWLSNDYGERFSISRQG---DISLMQCLDYETE 108
             L +TT              +D  V  +L NDY   F++++ G    ++L+Q +D E +
Sbjct: 416 DSLNLTTPLRIIVLDKDVEDTKDPEVHLFL-NDYTSVFTVTQTGITRYLTLLQPVDREEQ 474

Query: 109 DSYRFTVYATDTLMTTSAT-VNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGK 167
            +Y F++ A D +  +    VNI V++ ND  P F    YE+++      D++PG  + +
Sbjct: 475 QTYTFSITAFDGVQESEPVIVNIQVMDANDNTPTFPEISYEVYV----YTDMSPGDSVIQ 530

Query: 168 VEAADGDKGD--RVTLSLRGPYEKMFSIND-SGHISIV-DLSALNTSTIQLVVVATDTGN 223
           + A D D+G    +T  +    +  F IN  +G I+I   +  +   T  L V A D  N
Sbjct: 531 LTAVDADEGSNGEITYEILVGDQGDFIINKTTGLITIAPGVELIVGRTYALTVQAAD--N 588

Query: 224 PP 225
           PP
Sbjct: 589 PP 590



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 70/233 (30%), Positives = 102/233 (43%), Gaps = 26/233 (11%)

Query: 13   LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKP 72
            LVV A       R++  TL +           F+ + Y+V   ENLP     L +   K 
Sbjct: 787  LVVVATDGAVHPRHSTLTLAIKVLDIDDNSPVFTNSTYTVVVEENLPAGTTFLKIEA-KD 845

Query: 73   RDL--RVKYWLSNDYGERFSISR--QGDISLMQCLDYET----EDSYRFTVYATD---TL 121
             DL   V Y + +   + F       G++SL++ LDYE     E +  F V A D   T+
Sbjct: 846  VDLGANVSYRIRSPEVKHFFALHPFTGELSLLRSLDYEAFPEQEATITFLVEAFDIYGTM 905

Query: 122  MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDK----GD 177
                ATV + V ++ND+ P F    Y+  +      D   G+ I  V A D D       
Sbjct: 906  PPGIATVTVIVKDMNDYPPVFNKRIYKGMV----APDAVKGTPITTVYAEDADPPGLPAS 961

Query: 178  RVTL---SLRGPY-EKMFSI-NDSGH-ISIVDLSALNTSTIQLVVVATDTGNP 224
            RV      ++ PY   +F +  DSG  I+ V+L+   T+  +LVVVA D G P
Sbjct: 962  RVRYRVDDVQFPYPASIFDVVEDSGLVITRVNLNEEPTTIFKLVVVAFDDGEP 1014



 Score = 46.6 bits (109), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 53/193 (27%), Positives = 94/193 (48%), Gaps = 10/193 (5%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGER-FSISRQ-GDISLMQ 101
           +F +  YS+   E + +  VLL +         + Y + N   +R F++S   G ++L +
Sbjct: 615 RFPQLMYSLEISEAMRIGAVLLNLQATDREGDPITYAIENGDPQRVFNLSENTGILTLGK 674

Query: 102 CLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLP-HIPLADLT 160
            LD E+ D Y   V A+D     ++T  ++VV  +        P ++ +LP ++ + +  
Sbjct: 675 ALDRESTDRYILIVTASDGRPDGTSTATVNVVVTDV---NDNAPVFDPYLPRNLSVVEEE 731

Query: 161 PGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDSGHI-SIVDLSALNTSTIQLVVV 217
             + +G+V A D D G   +V  SL G +  +F I  +G I + V L+       +LVVV
Sbjct: 732 ANAFVGQVRATDPDAGINGQVHYSL-GNFNNLFRITSNGSIYTAVKLNREVRDYYELVVV 790

Query: 218 ATDTGNPPRQASV 230
           ATD    PR +++
Sbjct: 791 ATDGAVHPRHSTL 803



 Score = 45.8 bits (107), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 50/171 (29%), Positives = 80/171 (46%), Gaps = 17/171 (9%)

Query: 76  RVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDTLMT---TSATVNISV 132
           +V Y L N +   F I+  G I     L+ E  D Y   V ATD  +    ++ T+ I V
Sbjct: 751 QVHYSLGN-FNNLFRITSNGSIYTAVKLNREVRDYYELVVVATDGAVHPRHSTLTLAIKV 809

Query: 133 VNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEK-MF 191
           ++++D  P F    Y + +      +L  G+   K+EA D D G  V+  +R P  K  F
Sbjct: 810 LDIDDNSPVFTNSTYTVVVEE----NLPAGTTFLKIEAKDVDLGANVSYRIRSPEVKHFF 865

Query: 192 SIND-SGHISI---VDLSAL--NTSTIQLVVVATDTGN--PPRQASVPAIM 234
           +++  +G +S+   +D  A     +TI  +V A D     PP  A+V  I+
Sbjct: 866 ALHPFTGELSLLRSLDYEAFPEQEATITFLVEAFDIYGTMPPGIATVTVIV 916


>gi|328778418|ref|XP_624236.3| PREDICTED: protocadherin-like wing polarity protein stan-like [Apis
            mellifera]
          Length = 3163

 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 69/242 (28%), Positives = 111/242 (45%), Gaps = 21/242 (8%)

Query: 6    DFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLL 65
            D+ Q    V+     D+  R   A + V+ +  +     F    YSVS  E+ P+   +L
Sbjct: 765  DYKQEKRFVLTVTASDSGGRTDTALVYVNISDANNFSPVFENAPYSVSVFEDAPIGTTVL 824

Query: 66   TVT---TNKPRDLRVKYWLSNDYGER----FSISRQ-GDISLMQCLDYETEDSYRFTVYA 117
             V+   ++  ++ +V Y L  D G++    F I+ Q G I+  + LD E   +Y  TV A
Sbjct: 825  VVSATDSDVGKNAQVTYSLDTDNGDQTASEFIINPQTGAITTTKPLDREIVPAYLLTVTA 884

Query: 118  TDTL---MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEA--AD 172
             D     ++ +  V ISV +VND  P F  PQY+  +P     D+  G+ + +V A  AD
Sbjct: 885  RDGGIPPLSDTTDVEISVTDVNDNAPVFEAPQYQGSIPE----DVLVGTSVLRVSATDAD 940

Query: 173  GDKGDRVTLSLRGPYEKMFSINDSGHISIVDLSALNTSTIQ---LVVVATDTGNPPRQAS 229
             D   RV  +L    +  F+++ +  I I     L+  ++    L  VA D G+P     
Sbjct: 941  TDLNGRVRYALEDDGDGAFAVDSTTGI-IRTAKPLDRESVAKYILKAVAMDRGSPSLSTV 999

Query: 230  VP 231
            VP
Sbjct: 1000 VP 1001



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 64/230 (27%), Positives = 103/230 (44%), Gaps = 25/230 (10%)

Query: 13  LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTT--- 69
           +V+RA    +  R     L+V     +    +F  + +  S  EN+PV Y +L +     
Sbjct: 558 IVIRAQDGGSPARSNTTQLLVHVGDVNDNAPRFYTSHFQESVSENVPVGYSILRIQAYDA 617

Query: 70  NKPRDLRVKYWL-SNDYG----ERFSIS---RQGDISLMQCLDYETEDSYRFTVYATDT- 120
           ++  + ++KY + + D+     E F I+     G +   + LD E    Y+FTV A D+ 
Sbjct: 618 DEGANAQIKYTIGARDFTGASTENFPITVNTETGWLYTTKQLDREQCSRYQFTVIAADSG 677

Query: 121 --LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDR 178
               + SATV ++V +VND DP F    YE  +      D  PG+ +  V A D D+  R
Sbjct: 678 EISKSASATVILTVTDVNDNDPYFDPKNYESVVSE----DDPPGTPVTSVTATDPDEDAR 733

Query: 179 VTLSL-----RGPYEKMFSINDSGHISIVD-LSALNTSTIQLVVVATDTG 222
           +   +     RG +  + S N  G I+I   L         L V A+D+G
Sbjct: 734 IHYEITAGNTRGRF-AIASQNGRGLITIAQPLDYKQEKRFVLTVTASDSG 782



 Score = 47.0 bits (110), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 61/232 (26%), Positives = 104/232 (44%), Gaps = 27/232 (11%)

Query: 25  RYALATLIVSKAGTSLRELQFSKNEYSVSALENL-----PVNYVLLTVTTNKPRDLRVKY 79
           + A ATL+V     +    QF++  YS    E+L     PV   +     +   +  V+Y
Sbjct: 463 KTANATLVVRVLDDNDNYPQFTERTYSAWIPEDLDYTANPVIARIRATDADSGNNAAVRY 522

Query: 80  WL-SNDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVN 134
            +   +    FSI S  GD++L++ LDYE+  SY+  + A D      + +  + + V +
Sbjct: 523 AIIGGNTQNTFSIDSMVGDVALVKPLDYESTRSYKIVIRAQDGGSPARSNTTQLLVHVGD 582

Query: 135 VNDWDPRFRYPQY-ELFLPHIPLADLTPGSVIGKVEAADGDKGD----RVTLSLR---GP 186
           VND  PRF    + E    ++P+     G  I +++A D D+G     + T+  R   G 
Sbjct: 583 VNDNAPRFYTSHFQESVSENVPV-----GYSILRIQAYDADEGANAQIKYTIGARDFTGA 637

Query: 187 YEKMFSI---NDSGHI-SIVDLSALNTSTIQLVVVATDTGNPPRQASVPAIM 234
             + F I    ++G + +   L     S  Q  V+A D+G   + AS   I+
Sbjct: 638 STENFPITVNTETGWLYTTKQLDREQCSRYQFTVIAADSGEISKSASATVIL 689



 Score = 45.8 bits (107), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 58/236 (24%), Positives = 100/236 (42%), Gaps = 27/236 (11%)

Query: 25  RYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWL 81
           R    TL V+   T+     F   E   S  E +PV   ++TV     +  R+  V+Y +
Sbjct: 346 RTGTTTLQVNVLDTNDHAPSFEWPEEEASIREGVPVGSTVVTVKATDQDAGRNAEVEYSI 405

Query: 82  SNDYGER----------FSIS-RQGDISLMQCLDYETEDSYRFTVYATD------TLMTT 124
            +               F I  R G ++    LD E  + Y   +  +D         T 
Sbjct: 406 LSTTSSSGTANTEDALIFRIDPRTGVVTTRTPLDREKTEVYTVILSVSDQATPPSARKTA 465

Query: 125 SATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS-- 182
           +AT+ + V++ ND  P+F    Y  ++P     D T   VI ++ A D D G+   +   
Sbjct: 466 NATLVVRVLDDNDNYPQFTERTYSAWIPED--LDYTANPVIARIRATDADSGNNAAVRYA 523

Query: 183 -LRGPYEKMFSINDS-GHISIVD-LSALNTSTIQLVVVATDTGNPPRQASVPAIMH 235
            + G  +  FSI+   G +++V  L   +T + ++V+ A D G+P R  +   ++H
Sbjct: 524 IIGGNTQNTFSIDSMVGDVALVKPLDYESTRSYKIVIRAQDGGSPARSNTTQLLVH 579



 Score = 39.7 bits (91), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 43/140 (30%), Positives = 68/140 (48%), Gaps = 13/140 (9%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVT-TNKPRDL--RVKYWLSNDYGERFSI-SRQGDISLM 100
            F   +Y  S  E++ V   +L V+ T+   DL  RV+Y L +D    F++ S  G I   
Sbjct: 912  FEAPQYQGSIPEDVLVGTSVLRVSATDADTDLNGRVRYALEDDGDGAFAVDSTTGIIRTA 971

Query: 101  QCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLA 157
            + LD E+   Y     A D     ++T   V I + +VND  P F   +  L+     +A
Sbjct: 972  KPLDRESVAKYILKAVAMDRGSPSLSTVVPVTIKIEDVNDSPPAFENDKIILY-----IA 1026

Query: 158  DLTP-GSVIGKVEAADGDKG 176
            + +P GS +G++ A D D+G
Sbjct: 1027 ENSPIGSTVGEIYAHDPDEG 1046


>gi|262263277|tpg|DAA06579.1| TPA_inf: protocadherin beta 2 [Anolis carolinensis]
          Length = 809

 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 50/152 (32%), Positives = 78/152 (51%), Gaps = 16/152 (10%)

Query: 92  SRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYE 148
           S  G++  ++ LDYE    +R TV ATD+    +++ A ++++V++ ND  P F YP   
Sbjct: 505 SETGNMYALRSLDYEKIKDFRATVRATDSGTPTLSSDAIIHVTVIDENDNAPFFLYP--- 561

Query: 149 LFLPHIPLADLTP-----GSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-DSGHI 199
           L     P  +L P     G +I KV A DGD G    LS   L+     +FSI   +G +
Sbjct: 562 LQNNTSPCNELLPKMTEAGYLITKVVAVDGDSGQNSWLSYELLKATDPGLFSIGAQNGEV 621

Query: 200 SIVD-LSALNTSTIQLVVVATDTGNPPRQASV 230
                L+  +TS  +LV+V  D G PP+ ++ 
Sbjct: 622 KTRRPLTERDTSKQKLVIVVRDNGVPPQSSTA 653



 Score = 43.9 bits (102), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 38/138 (27%), Positives = 75/138 (54%), Gaps = 16/138 (11%)

Query: 96  DISLMQCLDYETEDSYRFTVYATDTLM---TTSATVNISVVNVNDWDPRFRYPQYELFLP 152
           D+ L + LD E +  +  T+ A D  +   T +A ++I ++++ND  P+F   +Y+    
Sbjct: 189 DLILEKPLDREQDSHFGLTLTAVDGGIPRRTGTAQIHIKILDINDNSPQFTQSEYK---- 244

Query: 153 HIPLADLTP-GSVIGKVEAADGDKGDRVTLSL---RGPYE--KMFSIND-SGHISIV-DL 204
            + L + +P G++I +VEA D D G    ++    R P +  K+F +N+ SG I+++ ++
Sbjct: 245 -VRLKENSPQGTLITRVEAKDLDFGSNALITYSFHRVPEKIYKLFHLNEVSGEITVLGEI 303

Query: 205 SALNTSTIQLVVVATDTG 222
                ++  + + ATD G
Sbjct: 304 DYEKETSYAMNIKATDGG 321


>gi|14589918|ref|NP_116749.1| protocadherin-11 X-linked isoform b precursor [Homo sapiens]
 gi|10803413|emb|CAC13123.1| protocadherin [Homo sapiens]
          Length = 1025

 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 76/274 (27%), Positives = 120/274 (43%), Gaps = 40/274 (14%)

Query: 45  FSKNEYSVSALENLPVNYV--LLTVTTNKPRDLRVKYWLSNDYGERFSISRQ-GDISLMQ 101
           F+ NEY+    ENLP +    L+TVT     D         D  + F+I  Q G I    
Sbjct: 570 FTHNEYNFYVPENLPRHGTVGLITVTDPDYGDNSAVTLSILDENDDFTIDSQTGVIRPNI 629

Query: 102 CLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYP----QYELFLPHI 154
             D E ++SY F V A D      ++SA V I+VV+VND  P F  P     YEL LP  
Sbjct: 630 SFDREKQESYTFYVKAEDGGRVSRSSSAKVTINVVDVNDNKPVFIVPPSNCSYELVLPST 689

Query: 155 PLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-DSGHISIVDLSALNTS 210
                 PG+V+ +V A D D G    +    + G    +F+I+ ++G+I++++   +   
Sbjct: 690 -----NPGTVVFQVIAVDNDTGMNAEVRYSIVGGNTRDLFAIDQETGNITLMEKCDVTDL 744

Query: 211 TIQLVVV-ATDTGNPPRQASVPAIMHFPEAIVQQAS--------------------SKLN 249
            +  V+V A D G P    SV  +  F    V  A+                    + ++
Sbjct: 745 GLHRVLVKANDLGQPDSLFSVVIVNLFVNESVTNATLINELVRKSTEAPVTPNTEIADVS 804

Query: 250 SGTSSTVLIILGVVLIVLGFVIILLILYIHKNKH 283
           S TS  V I++  V   +  V+++ I  + + + 
Sbjct: 805 SPTSDYVKILVAAVAGTITVVVVIFITAVVRCRQ 838



 Score = 57.8 bits (138), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 37/114 (32%), Positives = 61/114 (53%), Gaps = 10/114 (8%)

Query: 76  RVKYWLSNDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNIS 131
           ++ Y L  D    FS+  R G +++++ LD E ED Y FT+ A D     +T++ TV +S
Sbjct: 500 KINYLLGPDAPPEFSLDCRTGMLTVVKKLDREKEDKYLFTILAKDNGVPPLTSNVTVFVS 559

Query: 132 VVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDR--VTLSL 183
           +++ ND  P F + +Y  ++P     +L     +G +   D D GD   VTLS+
Sbjct: 560 IIDQNDNSPVFTHNEYNFYVPE----NLPRHGTVGLITVTDPDYGDNSAVTLSI 609



 Score = 38.1 bits (87), Expect = 7.4,   Method: Compositional matrix adjust.
 Identities = 36/139 (25%), Positives = 67/139 (48%), Gaps = 15/139 (10%)

Query: 103 LDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADL 159
           LD E +D+Y   V   D      +++A + +SV + ND  P F+  + E+ +P     + 
Sbjct: 207 LDREEKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVFKETEIEVSIPE----NA 262

Query: 160 TPGSVIGKVEAADGDKGDRVTLS------LRGPYEKMFSIN-DSGHISIVD-LSALNTST 211
             G+ + ++ A D D G+   +       +     ++F +N  +G I+I + L    T  
Sbjct: 263 PVGTSVTQLHATDADIGENAKIHFSFSNLVSNIARRLFHLNATTGLITIKEPLDREETPN 322

Query: 212 IQLVVVATDTGNPPRQASV 230
            +L+V+A+D G  P +A V
Sbjct: 323 HKLLVLASDGGLMPARAMV 341


>gi|440911891|gb|ELR61516.1| Cadherin-23, partial [Bos grunniens mutus]
          Length = 3319

 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 59/195 (30%), Positives = 89/195 (45%), Gaps = 20/195 (10%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWLSNDYGERFSIS-RQGDISLM 100
            F +  Y  +  E++PV  V+LTVT           ++Y L +  G +F+IS   GDI ++
Sbjct: 2367 FDQLSYQEAVFEDVPVGTVILTVTATDADSGNFALIEYSLVDGEG-KFAISPTTGDIYVL 2425

Query: 101  QCLDYETEDSYRFTVYATDT-------LMTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
              LD E +D Y  T  A D            S  V I V+++ND  P+F   Q+   +  
Sbjct: 2426 SSLDREKKDHYILTALAKDNPGDVASNRRENSVQVVIQVLDINDCRPQFSKLQFSTSV-- 2483

Query: 154  IPLADLTPGSVIGKVEAADGDKGDRVTL--SLRGPYEKMFSIN-DSGHISIVDLSALNTS 210
                +   G+ +  + A D D+G    L  SL GP  + F ++ DSG ++       +  
Sbjct: 2484 --YENEPAGTSVITMMATDQDEGSNAELAYSLEGPGMEAFHVDIDSGLVT-TKRPLQSYE 2540

Query: 211  TIQLVVVATDTGNPP 225
               L VVATD G PP
Sbjct: 2541 RFSLTVVATDGGQPP 2555



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 68/218 (31%), Positives = 101/218 (46%), Gaps = 44/218 (20%)

Query: 45  FSKNEYSVSALENLPVNY-VLLTVTTNKPRDLRVKYWLSNDYGE-----------RFSI- 91
           FSK  Y VS +EN+     VL    T+  R        S +YG+           +F I 
Sbjct: 626 FSKPAYFVSVVENIMAGATVLFLNATDLDR--------SREYGQESIIYSLEGSSQFRIN 677

Query: 92  SRQGDISLMQCLDYETEDSYRFTVYATD-----TLMTTSATVNISVVNVNDWDPRFRYPQ 146
           +R G+I+    LD ET+  Y   V A D        T  ATVNI+++++ND  P ++   
Sbjct: 678 ARSGEITTTSLLDRETKSEYILIVRAMDGGVGHNQKTGIATVNITLLDINDNHPTWKDAP 737

Query: 147 YELFLPHIPLADLT-PGSVIGKVEAADGDKGDRVTL--SLRGPYEKMFSINDS-GHIS-- 200
           Y     +I L ++T P S +  V A D D G+  TL  S++ P  K +S+N S G I   
Sbjct: 738 Y-----YINLVEMTPPDSDVTTVVAVDPDMGENGTLVYSIQPP-NKFYSLNSSTGKIRTT 791

Query: 201 --IVDLSALNTSTIQL----VVVATDTGNPPRQASVPA 232
             ++D    +    +L    +V  TD G PP +A+  A
Sbjct: 792 HVMLDRENPDPHEAELMRKIIVSVTDCGTPPLKATSSA 829



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 64/205 (31%), Positives = 96/205 (46%), Gaps = 28/205 (13%)

Query: 45  FSKNEYSVSALENLPVNYVLLTV--TTNKPRDL-RVKYWLSNDYGERFSISRQ-GDISLM 100
           FS+  Y+VS  EN+ V   +LTV  T N       V Y+ S+D  +RFS+ +  G I L+
Sbjct: 415 FSQPLYNVSLYENVTVGTSVLTVLATDNDVGTFGEVNYFFSDD-PDRFSLDKDTGLIVLI 473

Query: 101 QCLDYETEDSYRFTVYATDTL-MTTSATVNISVVNVNDWDPRFRYPQYELFL----PHIP 155
             LDYE    +  TV A D     T+  V I+V++VND  P F+   Y   L    P + 
Sbjct: 474 ARLDYELIQRFTLTVIARDGGGEETTGRVRINVLDVNDNVPTFQKDAYVGALRENEPSV- 532

Query: 156 LADLTPGSVIGKVEAADGDK--GDRVTLSL-----RGPYEKMFSINDSGHISI---VDLS 205
                  + + ++ A D D    +++T S+      G Y  +      G IS+   +D  
Sbjct: 533 -------TQLVRLRATDEDSPPNNQITYSIVNASAFGSYFDISVYEGYGVISVSRPLDYE 585

Query: 206 ALNTSTIQLVVVATDTGNPPRQASV 230
            +    I L V+A D GNPP  ++V
Sbjct: 586 QIPNGLIYLTVMAKDAGNPPLNSTV 610



 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 63/203 (31%), Positives = 91/203 (44%), Gaps = 24/203 (11%)

Query: 43   LQFSKNEYSVSALENLPVNYVLLTVTTNKPRDL-----RVKYWLSNDYGERFSISR-QGD 96
            +QFS   Y  + LENL +   ++ V      +L     R   + S      F I    G 
Sbjct: 1276 VQFSNASYEAAILENLALGTEIVRVQAYSIDNLNQITYRFDAYTSAQAKALFKIDAITGV 1335

Query: 97   ISLMQCLDYETEDSYRFTVYATDTLMTTSATV-NISVVNVNDWDPRFRYPQYELFLPHIP 155
            I++   LD E  D Y  TV A D      +TV  I+V++ ND  PRF +         +P
Sbjct: 1336 ITVKGLLDREKGDFYTLTVVADDGGPKVDSTVVYITVLDENDNSPRFDFTSDSAI--SVP 1393

Query: 156  LADLTPGSVIGKVEAADGDKGD--RVTLSLR-----GPYEKMFSINDS-GHISI---VDL 204
              D T G  +  V+A D D G   +V  SL      G +E + + NDS G I +   +D 
Sbjct: 1394 -EDCTVGQHVATVKARDPDAGSNGQVVFSLAAGNIAGAFE-IVTTNDSIGEIFVARPLDR 1451

Query: 205  SALNTSTIQLVVVATDTGNPPRQ 227
              L+   ++  VVA+D G PPR+
Sbjct: 1452 EELDHYILK--VVASDRGTPPRK 1472



 Score = 43.9 bits (102), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 31/90 (34%), Positives = 47/90 (52%), Gaps = 10/90 (11%)

Query: 92  SRQGDISLMQCLDYETEDSYRFTVYATDT----LMTTSATVNISVVNVNDWDPRF-RYPQ 146
           S +G +++++ LDYET  +Y+ TV ATD      ++T A + I + +V D DP F   P 
Sbjct: 139 SARGIVTVIRELDYETTQAYQLTVNATDQDKTRPLSTLANLAIIITDVQDMDPIFINLPY 198

Query: 147 YELFLPHIPLADLTPGSVIGKVEAADGDKG 176
                 H P     PG+ +  + A D DKG
Sbjct: 199 STNIYEHSP-----PGTTVRIITAIDQDKG 223



 Score = 43.5 bits (101), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 65/138 (47%), Gaps = 12/138 (8%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVT-TNKPRDL--RVKYWLSNDYGERFSISRQGDISLM- 100
            FS    +V  LEN P  + +L +T T++   L   + Y +     +RF I     I  + 
Sbjct: 2033 FSPAAVTVHLLENCPPGFSVLQITATDEDSGLNGELIYRIEAGAQDRFLIHPVSGIVRVG 2092

Query: 101  -QCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
               +D E ++SYR TV ATD     ++ +A + + + ++ND  P F  P   + +    L
Sbjct: 2093 NATIDREEQESYRLTVVATDRGAVPLSGTAIITVLIDDINDSRPEFLNPIQTVSV----L 2148

Query: 157  ADLTPGSVIGKVEAADGD 174
                PG+VI  V A D D
Sbjct: 2149 ESAEPGTVIANVTAIDRD 2166



 Score = 43.1 bits (100), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 53/197 (26%), Positives = 88/197 (44%), Gaps = 24/197 (12%)

Query: 44  QFSKNEYSVSALENLPVNYVL----LTVTTNKPRDLRVKYWLSNDYGERF-----SISRQ 94
           +F+ +EYSV+  E   V + L      V  ++  +   + +L  +    F     S+  +
Sbjct: 304 EFNSSEYSVAITELAQVGFALPLFIQVVDKDEGLNSMFEVYLVGNNSHHFIISPTSVQGK 363

Query: 95  GDISLMQC--LDYETEDSYRFTVYATDTL--MTTSATVNISVVNVNDWDPRFRYPQYELF 150
            DI +     LDYET D Y F ++A +++      A V I+++N ND  P F  P Y + 
Sbjct: 364 ADIRIRVAIPLDYETVDRYDFDLFANESVPDHVGYAKVKITLINENDNRPIFSQPLYNVS 423

Query: 151 LPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDSGHISIVDLSALN 208
           L      ++T G+ +  V A D D G    V        ++     D+G I ++  + L+
Sbjct: 424 L----YENVTVGTSVLTVLATDNDVGTFGEVNYFFSDDPDRFSLDKDTGLIVLI--ARLD 477

Query: 209 TSTIQ---LVVVATDTG 222
              IQ   L V+A D G
Sbjct: 478 YELIQRFTLTVIARDGG 494



 Score = 42.7 bits (99), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 42/131 (32%), Positives = 59/131 (45%), Gaps = 6/131 (4%)

Query: 95  GDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHI 154
           G + L Q LD ET+  +      +D     +  VNI V +VND  P F    Y + +P +
Sbjct: 37  GVVWLRQPLDRETKSEFTVEFSVSDHQGVITRKVNIQVGDVNDNAPTFHNQPYSVRIPEV 96

Query: 155 PLADLTP-GSVIGKVEAADGD--KGDRVTLSLRGPYEKMFSINDSGHISIV--DLSALNT 209
                TP G+ I  V A D D   G  V  S + P  + F+++ +  I  V  +L    T
Sbjct: 97  EQRGNTPVGTPIFIVNATDPDLGAGGSVLYSFQPP-SQFFAVDSARGIVTVIRELDYETT 155

Query: 210 STIQLVVVATD 220
              QL V ATD
Sbjct: 156 QAYQLTVNATD 166



 Score = 38.5 bits (88), Expect = 6.3,   Method: Compositional matrix adjust.
 Identities = 66/284 (23%), Positives = 120/284 (42%), Gaps = 56/284 (19%)

Query: 4    EDDFL-QPITLVVRA----IQYDNQDRYALATLIVSKAGTSLR----------ELQFSKN 48
            +D FL  P++ +VR     I  + Q+ Y L  +   +    L           ++  S+ 
Sbjct: 2077 QDRFLIHPVSGIVRVGNATIDREEQESYRLTVVATDRGAVPLSGTAIITVLIDDINDSRP 2136

Query: 49   EY-----SVSALENLPVNYVLLTVTTNKPRDL--RVKYWLSN------------DYGERF 89
            E+     +VS LE+     V+  VT    RDL   ++Y + +            D  + F
Sbjct: 2137 EFLNPIQTVSVLESAEPGTVIANVTAID-RDLNPELEYHIIDIVAKDDTDRLVPDQEDAF 2195

Query: 90   SIS-RQGDISLMQCLDYETEDSYRFTVYATD--------TLMTTSATVNISVVNVNDWDP 140
            +++   G + +   L+ E   +Y  T+   D        ++   +A + +++++VND  P
Sbjct: 2196 AVNINTGSVMVKSPLNRELVATYEVTLSVIDNASDLPERSVSVPNAKLTVNILDVNDNTP 2255

Query: 141  RFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLS----LRGPYEKMFSIN 194
            +F+      +   I L   TPG+ +  V A D DKG    +T S    +RG  +   S+ 
Sbjct: 2256 QFKPFGITYYTERI-LEGATPGTTLIAVAAVDPDKGLNGLITYSELPRVRGGQDGGESLC 2314

Query: 195  DSGHI---SIVDLSALNTSTIQLVVVATDTGNPPRQASVPAIMH 235
              G +     VD   ++   +   V A+D G+PPR A +P  + 
Sbjct: 2315 VLGKVIANRTVDYEEVHW--LNFTVRASDNGSPPRAAEIPVYLE 2356


>gi|270288727|ref|NP_001161833.1| protocadherin-11 X-linked isoform f precursor [Homo sapiens]
 gi|61814239|gb|AAX56125.1| protocadherin 11X isoform 5 [Homo sapiens]
          Length = 1065

 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 76/274 (27%), Positives = 120/274 (43%), Gaps = 40/274 (14%)

Query: 45  FSKNEYSVSALENLPVNYV--LLTVTTNKPRDLRVKYWLSNDYGERFSISRQ-GDISLMQ 101
           F+ NEY+    ENLP +    L+TVT     D         D  + F+I  Q G I    
Sbjct: 570 FTHNEYNFYVPENLPRHGTVGLITVTDPDYGDNSAVTLSILDENDDFTIDSQTGVIRPNI 629

Query: 102 CLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYP----QYELFLPHI 154
             D E ++SY F V A D      ++SA V I+VV+VND  P F  P     YEL LP  
Sbjct: 630 SFDREKQESYTFYVKAEDGGRVSRSSSAKVTINVVDVNDNKPVFIVPPSNCSYELVLPST 689

Query: 155 PLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-DSGHISIVDLSALNTS 210
                 PG+V+ +V A D D G    +    + G    +F+I+ ++G+I++++   +   
Sbjct: 690 -----NPGTVVFQVIAVDNDTGMNAEVRYSIVGGNTRDLFAIDQETGNITLMEKCDVTDL 744

Query: 211 TIQLVVV-ATDTGNPPRQASVPAIMHFPEAIVQQAS--------------------SKLN 249
            +  V+V A D G P    SV  +  F    V  A+                    + ++
Sbjct: 745 GLHRVLVKANDLGQPDSLFSVVIVNLFVNESVTNATLINELVRKSTEAPVTPNTEIADVS 804

Query: 250 SGTSSTVLIILGVVLIVLGFVIILLILYIHKNKH 283
           S TS  V I++  V   +  V+++ I  + + + 
Sbjct: 805 SPTSDYVKILVAAVAGTITVVVVIFITAVVRCRQ 838



 Score = 57.8 bits (138), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 37/114 (32%), Positives = 61/114 (53%), Gaps = 10/114 (8%)

Query: 76  RVKYWLSNDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNIS 131
           ++ Y L  D    FS+  R G +++++ LD E ED Y FT+ A D     +T++ TV +S
Sbjct: 500 KINYLLGPDAPPEFSLDCRTGMLTVVKKLDREKEDKYLFTILAKDNGVPPLTSNVTVFVS 559

Query: 132 VVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDR--VTLSL 183
           +++ ND  P F + +Y  ++P     +L     +G +   D D GD   VTLS+
Sbjct: 560 IIDQNDNSPVFTHNEYNFYVPE----NLPRHGTVGLITVTDPDYGDNSAVTLSI 609



 Score = 38.1 bits (87), Expect = 7.1,   Method: Compositional matrix adjust.
 Identities = 36/139 (25%), Positives = 67/139 (48%), Gaps = 15/139 (10%)

Query: 103 LDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADL 159
           LD E +D+Y   V   D      +++A + +SV + ND  P F+  + E+ +P     + 
Sbjct: 207 LDREEKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVFKETEIEVSIPE----NA 262

Query: 160 TPGSVIGKVEAADGDKGDRVTLS------LRGPYEKMFSIN-DSGHISIVD-LSALNTST 211
             G+ + ++ A D D G+   +       +     ++F +N  +G I+I + L    T  
Sbjct: 263 PVGTSVTQLHATDADIGENAKIHFSFSNLVSNIARRLFHLNATTGLITIKEPLDREETPN 322

Query: 212 IQLVVVATDTGNPPRQASV 230
            +L+V+A+D G  P +A V
Sbjct: 323 HKLLVLASDGGLMPARAMV 341


>gi|380796719|gb|AFE70235.1| protocadherin-16 precursor, partial [Macaca mulatta]
          Length = 1815

 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 58/197 (29%), Positives = 86/197 (43%), Gaps = 12/197 (6%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKP---RDLRVKYWLSNDYGERFSIS-RQGDISLM 100
           F    YSV   E++P   +LL +  + P    + RV Y+L       F +    G++   
Sbjct: 372 FPVPAYSVEVPEDVPAGTLLLQLQAHDPDAGANGRVTYYLGAGTAGAFLLEPSSGELRTA 431

Query: 101 QCLDYETEDSYRFTVYATDTL----MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
             LD E   SY F V A D      ++T+ +V I+V +VND  P F      L LP    
Sbjct: 432 AALDREQCPSYTFAVSAVDGAAAGPLSTTVSVTITVRDVNDHAPTFPTSPLRLRLPRPGP 491

Query: 157 ADLTPGSVIGKVEAADGDKGDRVTL--SLRGPYEKMFSIND-SGHISIVDLS-ALNTSTI 212
           +  TP   +  + A D D G   ++   L G      +++  +G I +     AL T   
Sbjct: 492 SFSTPTLALATLRAEDRDAGANASILYRLAGTPPPGTTVDSYTGEIRVARSPVALGTRDR 551

Query: 213 QLVVVATDTGNPPRQAS 229
            L +VATD G P R A+
Sbjct: 552 VLFIVATDLGRPARSAT 568



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 49/149 (32%), Positives = 69/149 (46%), Gaps = 15/149 (10%)

Query: 89  FSISRQGD-ISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQY 147
           FS+ R G  +SL   LD+E  D Y+  + A D      A + + V +VND  P F    Y
Sbjct: 839 FSVGRYGGRVSLTGPLDFEQCDRYQLQLLAHDGPHEGRANLTVLVEDVNDNAPAFSQSLY 898

Query: 148 E-LFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSI--NDSGHISIV 202
           + + L H P     PGS I  V A D D G    ++  L  P +  FS+  N+    +IV
Sbjct: 899 QVMLLEHTP-----PGSAILSVSATDRDSGANGHISYHLASPADG-FSVDPNNGTLFTIV 952

Query: 203 DLSAL---NTSTIQLVVVATDTGNPPRQA 228
              AL    +  + +V+ A D G P R A
Sbjct: 953 GTVALGHDGSGAVDVVLEARDHGTPGRAA 981



 Score = 45.1 bits (105), Expect = 0.062,   Method: Compositional matrix adjust.
 Identities = 67/255 (26%), Positives = 107/255 (41%), Gaps = 44/255 (17%)

Query: 11   ITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTN 70
            + +V+ A  +    R A AT+ V     +     F+   Y V+  E+LP    LLT+   
Sbjct: 965  VDVVLEARDHGTPGRAARATVHVQLQDQNDHAPSFTLPHYRVAVTEDLPPGSTLLTLEAT 1024

Query: 71   KPRDLR----VKYW-LSNDYGERFSISRQ---------------GDISLMQCLDYETEDS 110
                 R    V+Y  +S ++G  F +  +               G + L++ LD+E+   
Sbjct: 1025 DADGSRTHAAVEYSIISGNWGRVFQLEPRLAEAGESAGPGPQALGCLVLLEPLDFESLTQ 1084

Query: 111  YRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGK 167
            Y  TV A D      ++   V ++V++VND  P F    Y + +P     D   G+ +  
Sbjct: 1085 YNLTVAAADRGQPPQSSVVPVTVTVLDVNDNPPVFTRASYRVAVPE----DTPVGAELLH 1140

Query: 168  VEAADGDKGD----RVTLSLRGPYEKMFSIND-SGHISIVD-LSALNTSTIQLVVVATDT 221
            VEA+D D G     R T+S   P   +F +++ SG + +   L     +  QLVV A D 
Sbjct: 1141 VEASDADPGPHGLVRFTVSSGDP-SGLFELDESSGTLRLAHALDCETQARHQLVVQAAD- 1198

Query: 222  GNPPRQASVPAIMHF 236
                     PA  HF
Sbjct: 1199 ---------PAGAHF 1204



 Score = 43.5 bits (101), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 64/148 (43%), Gaps = 11/148 (7%)

Query: 13  LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKP 72
           L V A  + +  R A   L VS A  +     F + EYSV   EN      LLT+    P
Sbjct: 134 LTVVASDHGSPPRSATQVLTVSVADVNDEAPTFQQQEYSVLLRENSAPGTSLLTLRATDP 193

Query: 73  RDLRVKYWLSNDYG----ERFSISRQ-GDISLMQCLDYETEDSYRFTVYATD---TLMTT 124
            DL     ++  YG      FS+    G ++ ++ LD E ++    TVYA D       T
Sbjct: 194 -DLGANGQVT--YGGVSSGSFSLDPDTGVLTTLRALDREEQEEINLTVYAQDRGSPPQLT 250

Query: 125 SATVNISVVNVNDWDPRFRYPQYELFLP 152
            AT+ ++V + ND  P F      L +P
Sbjct: 251 HATIRVAVEDENDHAPTFGSTHLSLEVP 278



 Score = 43.5 bits (101), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 34/114 (29%), Positives = 53/114 (46%), Gaps = 13/114 (11%)

Query: 87   ERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDTL-MTTSATVNISVVNVNDWDPRFRY 144
            E F++ S  G++      DYE  +S+R  V A D   ++ S TV++ V   +++DP F  
Sbjct: 1273 EAFALNSSTGELRARVAFDYEHTESFRLLVGAADAGNLSASVTVSVLVTGEDEYDPVFLA 1332

Query: 145  PQYELFLPHIPLADLTPGSVIGKVEAADGDKGDR----VTLSLRGPYEKMFSIN 194
            P +   +P         G  +G V+A D D G       +L+   PY   F IN
Sbjct: 1333 PAFHFQVPE----GARRGHSLGHVQATDEDGGADGLVLYSLATSSPY---FGIN 1379



 Score = 42.4 bits (98), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 60/230 (26%), Positives = 96/230 (41%), Gaps = 28/230 (12%)

Query: 13  LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVT---- 68
           L + A       R A   +IV   G + R  +F +        EN P    +++      
Sbjct: 553 LFIVATDLGRPARSATGVIIVGLQGEAERGPRFPRTSSEAMIRENAPPGTPIVSPRAVHA 612

Query: 69  --TNKPRDLRVKYW-LSNDYGERFSIS-RQGDISL--MQCLDYETEDSYRFTVYATDTLM 122
             TN P    + Y  LS +    FSI    G I++   + LD+E     R  + A     
Sbjct: 613 GGTNGP----ITYSILSGNEKGTFSIQPSTGAITVRSAEGLDFEVSPRLRLVLQAESGGA 668

Query: 123 TTSATVNISVVNVNDWDPRFRYPQYELFLPHI-PLADLTPGSVIGKVEAADGDKGD---- 177
                + +++ + ND  PRF  P Y  FLP   PL     G ++ +VEA D D+G     
Sbjct: 669 FAFTVLTLTLQDANDNAPRFLRPHYVAFLPESRPLE----GPLL-QVEADDLDQGSGGQI 723

Query: 178 RVTLSLRGPYEKMFSINDSGHISIVDLSALNT---STIQLVVVATDTGNP 224
             +L+   P   +F + D    +I   + L+    +  +LV++ATD G+P
Sbjct: 724 SYSLAASQPARGLFHV-DPATGTITTTAILDREIWAETRLVLMATDRGSP 772



 Score = 40.8 bits (94), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 26/94 (27%), Positives = 49/94 (52%), Gaps = 9/94 (9%)

Query: 95  GDISLMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFL 151
           G+   M+ LD E E +++  + A D     ++ +  + ++V++ ND  P F  P Y + +
Sbjct: 322 GEFGTMRPLDREVEPAFQLRIEARDGGQPALSATLLLTVTVLDANDHAPAFPVPAYSVEV 381

Query: 152 PHIPLADLTPGSVIGKVEAADGDKG--DRVTLSL 183
           P     D+  G+++ +++A D D G   RVT  L
Sbjct: 382 PE----DVPAGTLLLQLQAHDPDAGANGRVTYYL 411


>gi|344275021|ref|XP_003409312.1| PREDICTED: protocadherin-15 isoform 6 [Loxodonta africana]
          Length = 1898

 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 67/242 (27%), Positives = 112/242 (46%), Gaps = 29/242 (11%)

Query: 6   DFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVL- 64
           DF Q   LV++A Q +     A A+L +     + +   F+   Y    LE+ PV   + 
Sbjct: 319 DFHQKFDLVIKAEQDNGHPLPAFASLHIEILDENNQSPYFTMPAYQGYILESAPVGSTIS 378

Query: 65  --LTVTT-----------NKPRDLRVKYWLSNDYGERFSISRQG---DISLMQCLDYETE 108
             L +TT              +D  V  +L NDY   F++++ G    ++L+Q +D E +
Sbjct: 379 DSLNLTTPLRIIVLDKDVEDTKDPEVHLFL-NDYTSVFTVTQTGITRYLTLLQPVDREEQ 437

Query: 109 DSYRFTVYATDTLMTTSAT-VNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGK 167
            +Y F++ A D +  +    VNI V++ ND  P F    YE+++      D++PG  + +
Sbjct: 438 QTYTFSITAFDGVQESEPVIVNIQVMDANDNTPTFPEISYEVYV----YTDMSPGDSVIQ 493

Query: 168 VEAADGDKGD--RVTLSLRGPYEKMFSIND-SGHISIV-DLSALNTSTIQLVVVATDTGN 223
           + A D D+G    +T  +    +  F IN  +G I+I   +  +   T  L V A D  N
Sbjct: 494 LTAVDADEGSNGEITYEILVGDQGDFIINKTTGLITIAPGVELIVGRTYALTVQAAD--N 551

Query: 224 PP 225
           PP
Sbjct: 552 PP 553



 Score = 48.9 bits (115), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 70/233 (30%), Positives = 102/233 (43%), Gaps = 26/233 (11%)

Query: 13  LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKP 72
           LVV A       R++  TL +           F+ + Y+V   ENLP     L +   K 
Sbjct: 750 LVVVATDGAVHPRHSTLTLAIKVLDIDDNSPVFTNSTYTVVVEENLPAGTTFLKIEA-KD 808

Query: 73  RDL--RVKYWLSNDYGERFSISR--QGDISLMQCLDYET----EDSYRFTVYATD---TL 121
            DL   V Y + +   + F       G++SL++ LDYE     E +  F V A D   T+
Sbjct: 809 VDLGANVSYRIRSPEVKHFFALHPFTGELSLLRSLDYEAFPEQEATITFLVEAFDIYGTM 868

Query: 122 MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDK----GD 177
               ATV + V ++ND+ P F    Y+  +      D   G+ I  V A D D       
Sbjct: 869 PPGIATVTVIVKDMNDYPPVFNKRIYKGMV----APDAVKGTPITTVYAEDADPPGLPAS 924

Query: 178 RVTL---SLRGPY-EKMFSI-NDSGH-ISIVDLSALNTSTIQLVVVATDTGNP 224
           RV      ++ PY   +F +  DSG  I+ V+L+   T+  +LVVVA D G P
Sbjct: 925 RVRYRVDDVQFPYPASIFDVVEDSGLVITRVNLNEEPTTIFKLVVVAFDDGEP 977



 Score = 46.6 bits (109), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 53/193 (27%), Positives = 94/193 (48%), Gaps = 10/193 (5%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGER-FSISRQ-GDISLMQ 101
           +F +  YS+   E + +  VLL +         + Y + N   +R F++S   G ++L +
Sbjct: 578 RFPQLMYSLEISEAMRIGAVLLNLQATDREGDPITYAIENGDPQRVFNLSENTGILTLGK 637

Query: 102 CLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLP-HIPLADLT 160
            LD E+ D Y   V A+D     ++T  ++VV  +        P ++ +LP ++ + +  
Sbjct: 638 ALDRESTDRYILIVTASDGRPDGTSTATVNVVVTDV---NDNAPVFDPYLPRNLSVVEEE 694

Query: 161 PGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDSGHI-SIVDLSALNTSTIQLVVV 217
             + +G+V A D D G   +V  SL G +  +F I  +G I + V L+       +LVVV
Sbjct: 695 ANAFVGQVRATDPDAGINGQVHYSL-GNFNNLFRITSNGSIYTAVKLNREVRDYYELVVV 753

Query: 218 ATDTGNPPRQASV 230
           ATD    PR +++
Sbjct: 754 ATDGAVHPRHSTL 766



 Score = 45.8 bits (107), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 50/171 (29%), Positives = 80/171 (46%), Gaps = 17/171 (9%)

Query: 76  RVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDTLMT---TSATVNISV 132
           +V Y L N +   F I+  G I     L+ E  D Y   V ATD  +    ++ T+ I V
Sbjct: 714 QVHYSLGN-FNNLFRITSNGSIYTAVKLNREVRDYYELVVVATDGAVHPRHSTLTLAIKV 772

Query: 133 VNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEK-MF 191
           ++++D  P F    Y + +      +L  G+   K+EA D D G  V+  +R P  K  F
Sbjct: 773 LDIDDNSPVFTNSTYTVVVEE----NLPAGTTFLKIEAKDVDLGANVSYRIRSPEVKHFF 828

Query: 192 SIND-SGHISI---VDLSAL--NTSTIQLVVVATDTGN--PPRQASVPAIM 234
           +++  +G +S+   +D  A     +TI  +V A D     PP  A+V  I+
Sbjct: 829 ALHPFTGELSLLRSLDYEAFPEQEATITFLVEAFDIYGTMPPGIATVTVIV 879


>gi|297676216|ref|XP_002816037.1| PREDICTED: protocadherin beta-5 [Pongo abelii]
          Length = 795

 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 48/151 (31%), Positives = 73/151 (48%), Gaps = 12/151 (7%)

Query: 95  GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFL 151
           G +  ++ LDYE   ++ F V ATD     +++ A V + V++ ND  P   YP      
Sbjct: 510 GHLFALRSLDYEALQAFEFRVGATDRGSPALSSEALVRVLVLDANDNSPFVLYPLQNGSA 569

Query: 152 PHIPLADLT--PGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSI-NDSGHISIVD-L 204
           P   L      PG ++ KV A DGD G    LS   L+     +FS+   +G +     L
Sbjct: 570 PCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKATEPGLFSVWAHNGEVRTARLL 629

Query: 205 SALNTSTIQLVVVATDTGNPPRQASVPAIMH 235
           S  + +  +LVV+  D G PPR A+  A++H
Sbjct: 630 SERDAAKHRLVVLVKDNGEPPRSAT--AMLH 658



 Score = 45.4 bits (106), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 43/153 (28%), Positives = 70/153 (45%), Gaps = 20/153 (13%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYG--------ERFSI-SRQ 94
           +F ++ Y V   EN P+N +++ V+    RDL    + S  Y         + F I  + 
Sbjct: 241 EFLQSLYEVQVPENSPLNSLVVVVSA---RDLDAGAYGSVAYALFQGDEVTQPFVIDEKT 297

Query: 95  GDISLMQCLDYETEDSYRFTVYATD-TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
           G+I L + LD+E    Y   + ATD   ++   TV I VV+VND       P+  +    
Sbjct: 298 GEIRLKRALDFEATPYYNVEIVATDGGGLSGKCTVAIEVVDVND-----NAPEITMSTLS 352

Query: 154 IPLADLTPGSVIGKVEAADGDKGD--RVTLSLR 184
            P  +  P +V+     +D D GD  R+  S++
Sbjct: 353 SPTPENAPETVVAVFSVSDPDSGDNGRMMCSIK 385



 Score = 45.1 bits (105), Expect = 0.059,   Method: Compositional matrix adjust.
 Identities = 45/143 (31%), Positives = 65/143 (45%), Gaps = 21/143 (14%)

Query: 97  ISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
           ++  + LD E++  Y  T+  TD     + T   + + V +VND  P F    Y LF+  
Sbjct: 402 LATQRTLDRESQAEYNITITVTDLGTPRLKTEHNITVLVSDVNDNAPAFTQTSYTLFVRE 461

Query: 154 IPLADLTPGSVIGKVEAADGDKGD--RVTLSL------RGPYEKMFSIN-DSGH---ISI 201
               + +P   IG V A D D G   +VT SL        P   + SIN D+GH   +  
Sbjct: 462 ----NNSPALHIGSVSATDRDSGTNAQVTYSLLPSQDPHLPLASLVSINADNGHLFALRS 517

Query: 202 VDLSALNTSTIQLVVVATDTGNP 224
           +D  AL     +  V ATD G+P
Sbjct: 518 LDYEALQ--AFEFRVGATDRGSP 538


>gi|41223223|emb|CAD92413.1| protocadherin [Homo sapiens]
          Length = 841

 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 76/274 (27%), Positives = 120/274 (43%), Gaps = 40/274 (14%)

Query: 45  FSKNEYSVSALENLPVNYV--LLTVTTNKPRDLRVKYWLSNDYGERFSISRQ-GDISLMQ 101
           F+ NEY+    ENLP +    L+TVT     D         D  + F+I  Q G I    
Sbjct: 390 FTHNEYNFYVPENLPRHGTVGLITVTDPDYGDNSAVTLSILDENDDFTIDSQTGVIRPNI 449

Query: 102 CLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYP----QYELFLPHI 154
             D E ++SY F V A D      ++SA V I+VV+VND  P F  P     YEL LP  
Sbjct: 450 SFDREKQESYTFYVKAEDGGRVSRSSSAKVTINVVDVNDNKPVFIVPPSNCSYELVLPST 509

Query: 155 PLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-DSGHISIVDLSALNTS 210
                 PG+V+ +V A D D G    +    + G    +F+I+ ++G+I++++   +   
Sbjct: 510 -----NPGTVVFQVIAVDNDTGMNAEVRYSIVGGNTRDLFAIDQETGNITLMEKCDVTDL 564

Query: 211 TIQLVVV-ATDTGNPPRQASVPAIMHFPEAIVQQAS--------------------SKLN 249
            +  V+V A D G P    SV  +  F    V  A+                    + ++
Sbjct: 565 GLHRVLVKANDLGQPDSLFSVVIVNLFVNESVTNATLINELVRKSTEAPVTPNTEIADVS 624

Query: 250 SGTSSTVLIILGVVLIVLGFVIILLILYIHKNKH 283
           S TS  V I++  V   +  V+++ I  + + + 
Sbjct: 625 SPTSDYVKILVAAVAGTITVVVVIFITAVVRCRQ 658



 Score = 57.8 bits (138), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 37/114 (32%), Positives = 61/114 (53%), Gaps = 10/114 (8%)

Query: 76  RVKYWLSNDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNIS 131
           ++ Y L  D    FS+  R G +++++ LD E ED Y FT+ A D     +T++ TV +S
Sbjct: 320 KINYLLGPDAPPEFSLDCRTGMLTVVKKLDREKEDKYLFTILAKDNGVPPLTSNVTVFVS 379

Query: 132 VVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDR--VTLSL 183
           +++ ND  P F + +Y  ++P     +L     +G +   D D GD   VTLS+
Sbjct: 380 IIDQNDNSPVFTHNEYNFYVPE----NLPRHGTVGLITVTDPDYGDNSAVTLSI 429



 Score = 37.7 bits (86), Expect = 9.1,   Method: Compositional matrix adjust.
 Identities = 36/139 (25%), Positives = 67/139 (48%), Gaps = 15/139 (10%)

Query: 103 LDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADL 159
           LD E +D+Y   V   D      +++A + +SV + ND  P F+  + E+ +P     + 
Sbjct: 27  LDREEKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVFKETEIEVSIPE----NA 82

Query: 160 TPGSVIGKVEAADGDKGDRVTLS------LRGPYEKMFSIN-DSGHISIVD-LSALNTST 211
             G+ + ++ A D D G+   +       +     ++F +N  +G I+I + L    T  
Sbjct: 83  PVGTSVTQLHATDADIGENAKIHFSFSNLVSNIARRLFHLNATTGLITIKEPLDREETPN 142

Query: 212 IQLVVVATDTGNPPRQASV 230
            +L+V+A+D G  P +A V
Sbjct: 143 HKLLVLASDGGLMPARAMV 161


>gi|221045914|dbj|BAH14634.1| unnamed protein product [Homo sapiens]
          Length = 897

 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 68/216 (31%), Positives = 100/216 (46%), Gaps = 20/216 (9%)

Query: 45  FSKNEYSVSALENLPVNYV--LLTVTTNKPRDLRVKYWLSNDYGERFSISRQ-GDISLMQ 101
           F+ NEY+    ENLP +    L+TVT     D         D  + F+I  Q G I    
Sbjct: 599 FTHNEYNFYVPENLPRHGTVGLITVTDPDYGDNSAVTLSILDENDDFTIDSQTGVIRPNI 658

Query: 102 CLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYP----QYELFLPHI 154
             D E ++SY F V A D      ++SA V I+VV+VND  P F  P     YEL LP  
Sbjct: 659 SFDREKQESYTFYVKAEDGGRVSRSSSAKVTINVVDVNDNKPVFIVPPSNCSYELVLPST 718

Query: 155 PLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-DSGHISIVDLSALNTS 210
                 PG+V+ +V A D D G    +    + G    +F+I+ ++G+I++++   +   
Sbjct: 719 -----NPGTVVFQVIAVDNDTGMNAEVRYSIVGGNTRDLFAIDQETGNITLMEKCDVTDL 773

Query: 211 TIQLVVV-ATDTGNPPRQASVPAIMHFPEAIVQQAS 245
            +  V+V A D G P    SV  +  F    V  A+
Sbjct: 774 GLHRVLVKANDLGQPDSLFSVVIVNLFVNESVTNAT 809



 Score = 57.8 bits (138), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 37/114 (32%), Positives = 61/114 (53%), Gaps = 10/114 (8%)

Query: 76  RVKYWLSNDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNIS 131
           ++ Y L  D    FS+  R G +++++ LD E ED Y FT+ A D     +T++ TV +S
Sbjct: 529 KINYLLGPDAPPEFSLDCRTGMLTVVKKLDREKEDKYLFTILAKDNGVPPLTSNVTVFVS 588

Query: 132 VVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDR--VTLSL 183
           +++ ND  P F + +Y  ++P     +L     +G +   D D GD   VTLS+
Sbjct: 589 IIDQNDNSPVFTHNEYNFYVPE----NLPRHGTVGLITVTDPDYGDNSAVTLSI 638



 Score = 38.5 bits (88), Expect = 6.0,   Method: Compositional matrix adjust.
 Identities = 36/139 (25%), Positives = 67/139 (48%), Gaps = 15/139 (10%)

Query: 103 LDYETEDSYRFTVYATDTLM---TTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADL 159
           LD E +D+Y   V   D      +++A + +SV + ND  P F+  + E+ +P     + 
Sbjct: 236 LDREEKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVFKETEIEVSIPE----NA 291

Query: 160 TPGSVIGKVEAADGDKGDRVTLS------LRGPYEKMFSIN-DSGHISIVD-LSALNTST 211
             G+ + ++ A D D G+   +       +     ++F +N  +G I+I + L    T  
Sbjct: 292 PVGTSVTQLHATDADIGENAKIHFSFSNLVSNIARRLFHLNATTGLITIKEPLDREETPN 351

Query: 212 IQLVVVATDTGNPPRQASV 230
            +L+V+A+D G  P +A V
Sbjct: 352 HKLLVLASDGGLMPARAMV 370


>gi|190338822|gb|AAI62556.1| Pcdh2g3 protein [Danio rerio]
          Length = 935

 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 62/230 (26%), Positives = 109/230 (47%), Gaps = 21/230 (9%)

Query: 11  ITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVT-- 68
           +TL++ A+      R     + V+    +     FS+  Y VS  EN PV+ V++TV+  
Sbjct: 196 VTLILTAVDGGTPPRSGTVAIHVTVLDANDNAPVFSQAVYKVSLPENSPVDTVVVTVSAT 255

Query: 69  -TNKPRDLRVKYWLS--NDYGER-FSISRQ-GDISLMQCLDYETEDSYRFTVYATDTL-M 122
             ++ ++  V Y  S  +D  ++ FS+ +  GDI +   LD+E E  Y   V   D   +
Sbjct: 256 DADEGQNGEVMYEFSRISDKAKKLFSLDKNTGDIRIAGALDFEDEAVYELRVEGKDVFGL 315

Query: 123 TTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGD----R 178
           ++ A V I++ +VND  P  R       +P   L    PG+ +G +   D D  +    R
Sbjct: 316 SSDAKVVINLSDVNDNAPEIRLKSLRSPVPESAL----PGTEVGIINVQDRDSENNGQVR 371

Query: 179 VTLSLRGPYEKMFSINDSGHISIVDLSALNT---STIQLVVVATDTGNPP 225
            ++    P++ + SI +  + S+V    L+    S   + ++ATD G+PP
Sbjct: 372 CSIQQNVPFKLVPSIKN--YYSLVTTGELDRELLSEYNITIIATDEGSPP 419


>gi|75072040|sp|Q6WYY1.1|PC11X_PANPA RecName: Full=Protocadherin-11 X-linked; Short=Protocadherin-11;
           AltName: Full=Protocadherin on the X chromosome;
           Short=PCDH-X; Flags: Precursor
 gi|37813462|gb|AAR04489.1| protocadherin X precursor long isoform [Pan paniscus]
          Length = 1347

 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 63/195 (32%), Positives = 93/195 (47%), Gaps = 20/195 (10%)

Query: 45  FSKNEYSVSALENLPVNYV--LLTVTTNKPRDLRVKYWLSNDYGERFSISRQ-GDISLMQ 101
           F+ NEY+    ENLP +    L+TVT     D         D  + F+I  Q G I    
Sbjct: 570 FTHNEYNFYVPENLPRHGTVGLITVTDPDYGDNSAVTLSILDENDDFTIDSQTGVIRPNI 629

Query: 102 CLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYP----QYELFLPHI 154
             D E ++SY F V A D      ++SA V I+VV+VND  P F  P     YEL LP  
Sbjct: 630 SFDREKQESYTFYVKAEDGGRVSRSSSAKVTINVVDVNDNKPVFIVPPSNYSYELVLP-- 687

Query: 155 PLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-DSGHISIVDLSALNTS 210
                 PG+V+ +V A D D G    +    + G    +F+I+ ++G+I++++   +   
Sbjct: 688 ---STNPGTVVFQVMAVDNDTGMNAEVRYSIVGGNTRDLFAIDQETGNITLMEKCDVTDL 744

Query: 211 TIQLVVV-ATDTGNP 224
            +  V+V A D G P
Sbjct: 745 GLHRVLVKANDLGQP 759



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/114 (32%), Positives = 61/114 (53%), Gaps = 10/114 (8%)

Query: 76  RVKYWLSNDYGERFSISRQ-GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNIS 131
            + Y L  D    FS+ R+ G +++++ LD E ED Y FT+ A D     +T++ TV +S
Sbjct: 500 EINYLLGPDAPPEFSLDRRTGMLTVVKKLDREKEDKYLFTILAKDNGVPPLTSNVTVFVS 559

Query: 132 VVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDR--VTLSL 183
           +++ ND  P F + +Y  ++P     +L     +G +   D D GD   VTLS+
Sbjct: 560 IIDQNDNSPVFTHNEYNFYVPE----NLPRHGTVGLITVTDPDYGDNSAVTLSI 609



 Score = 37.7 bits (86), Expect = 8.8,   Method: Compositional matrix adjust.
 Identities = 36/139 (25%), Positives = 67/139 (48%), Gaps = 15/139 (10%)

Query: 103 LDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADL 159
           LD E +D+Y   V   D      +++A + +SV + ND  P F+  + E+ +P     + 
Sbjct: 207 LDREEKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVFKETEIEVSIPE----NA 262

Query: 160 TPGSVIGKVEAADGDKGDRVTLS------LRGPYEKMFSIN-DSGHISIVD-LSALNTST 211
             G+ + ++ A D D G+   +       +     ++F +N  +G I+I + L    T  
Sbjct: 263 PVGTSVTQLHATDADIGENAKIHFSFSNLVSNIARRLFHLNATTGLITIKEPLDREETPN 322

Query: 212 IQLVVVATDTGNPPRQASV 230
            +L+V+A+D G  P +A V
Sbjct: 323 HKLLVLASDGGLMPARAMV 341


>gi|345309006|ref|XP_001515584.2| PREDICTED: protocadherin gamma-A10-like [Ornithorhynchus anatinus]
          Length = 850

 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 77/279 (27%), Positives = 119/279 (42%), Gaps = 46/279 (16%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKP---RDLRVKYWLSNDYGERFSIS-------RQ 94
           F +  YSV   EN P    +  VT   P    + RV Y +S   G+   +S         
Sbjct: 452 FEQKAYSVYIPENNPRGASVFRVTARDPDSEENARVTYSISEKPGQEPPLSSYVSVNSET 511

Query: 95  GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFL 151
           G +  ++  DYE     +  V A D     ++++ +V + V++ ND  P   YP     L
Sbjct: 512 GVLYALRSFDYEQFRELQLLVTAQDGGTPALSSNVSVTLLVLDENDNAPEILYPS----L 567

Query: 152 P-----HIPLADLT--PGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-DSGHI- 199
           P      + LA  +  PG ++ KV A DGD G    LS   L+     +FS+   +G I 
Sbjct: 568 PTDGSTGVELAPRSAEPGYLVTKVVAVDGDSGQNAWLSYRLLKATEPGLFSVGLHTGEIR 627

Query: 200 ---SIVDLSALNTSTIQLVVVATDTGNPPRQA----------SVPAIMHFPEAIVQQASS 246
              S +D  AL  S   LVV   D G PP  A          S+P I+    ++   A  
Sbjct: 628 TTRSFLDKDALKQS---LVVAVRDNGEPPLSATVTVTVAVADSIPEILSDLSSLSTPADP 684

Query: 247 KLNSGTSSTVLIILGVVLIVLGFVIILLILYIHKNKHTK 285
           + +S T   V+ +  V  + L F+I+LL L + + +  +
Sbjct: 685 E-SSLTLYLVVAVATVSCLFLAFIIVLLALKLRRWRAAR 722



 Score = 55.8 bits (133), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 62/221 (28%), Positives = 97/221 (43%), Gaps = 23/221 (10%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWLSN--DYGER-FSISR-QGDI 97
           F+++ Y V   E+ PV  +++TV    P +     V Y      D   R F ++   G+I
Sbjct: 242 FTQSVYEVKVPEDAPVGTLVVTVNATDPDEGINAEVTYSFRKIRDKTSRIFQLNAVTGEI 301

Query: 98  SLMQCLDYETEDSYRFTVYATDTL-MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
           S ++ LDY+  + Y   + A D   +   A V +++V+VND  P          L     
Sbjct: 302 STLKNLDYQESEYYEMEIQAQDGRDLFARAKVQVTIVDVNDNAPEVTITS----LTSSVS 357

Query: 157 ADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDS--GHISIVDLSALNTSTI-- 212
            D  PG+VI  +   D D GD   ++   P    F +  S   + S+V  +AL+   I  
Sbjct: 358 EDSPPGTVIALLNVHDRDSGDDGLVTCSIPDNLPFKLKKSYGNYYSLVTENALDRELIPY 417

Query: 213 -QLVVVATDTGNPPRQASVPAIMHF------PEAIVQQASS 246
             + V+ATD G+PP  A     +H       P A  Q+A S
Sbjct: 418 YNVTVIATDRGSPPLSAHTYITLHVTDTNDNPPAFEQKAYS 458


>gi|7407144|gb|AAF61928.1|AF231022_1 protocadherin Fat 2 [Homo sapiens]
          Length = 4349

 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 52/193 (26%), Positives = 90/193 (46%), Gaps = 21/193 (10%)

Query: 43   LQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGER---FSISRQ-GDIS 98
            L F +  YS + +E  PVN+++  ++      L   +W +   G++   F I +  G I 
Sbjct: 1347 LAFDETYYSFTVMETDPVNHMVGVISVEGRPGL---FWFNISGGDKDMDFDIEKTTGSIV 1403

Query: 99   LMQCLDYETEDSYRFTVYATDTLMTTSATVNISVV-NVNDWDPRFRYPQYELFLPHIPLA 157
            + + LD     +Y  TV  TD   T +  V+I ++ N+N   P+F   +YE+ +P     
Sbjct: 1404 IARPLDTRRRSNYNLTVEVTDGSRTIATQVHIFMIANINHHRPQFLETRYEVRVPQ---- 1459

Query: 158  DLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSGHISIVDLSALNTSTIQLVVV 217
            D  PG  + +V+A D DKG  +  ++ G         D G  S+  L    +S + + V 
Sbjct: 1460 DTVPGVELLRVQAIDQDKGKSLIYTIHGS-------QDPGSASLFQLDP--SSGVLVTVG 1510

Query: 218  ATDTGNPPRQASV 230
              D G+ P Q ++
Sbjct: 1511 KLDLGSGPSQHTL 1523



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/142 (31%), Positives = 69/142 (48%), Gaps = 16/142 (11%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYG----ERFSI-SRQGD 96
            F  + Y     EN+PV   ++ VT    +  RD +V Y LS D G    E F+I S  G 
Sbjct: 2797 FEADPYKAVLTENMPVGTSVIQVTAIDKDTGRDGQVSYRLSADPGSNVHELFAIDSESGW 2856

Query: 97   ISLMQCLDYETEDSYRFTVYATD----TLMTTSATVNISVVNVNDWDPRFRYPQYELFLP 152
            I+ +Q LD ET  +Y F V A D      +++ A V +S+ + ND  PRF   +Y   + 
Sbjct: 2857 ITTLQELDCETCQTYHFHVVAYDHGQTIQLSSQALVQVSITDENDNAPRFASEEYRGSV- 2915

Query: 153  HIPLADLTPGSVIGKVEAADGD 174
               + +  PG ++  ++  D D
Sbjct: 2916 ---VENSEPGELVATLKTLDAD 2934



 Score = 55.5 bits (132), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 62/201 (30%), Positives = 86/201 (42%), Gaps = 20/201 (9%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTT------NKPRDLRVKYWLSNDYGERFSISRQGD- 96
            +F+  EY  S +EN     ++ T+ T       + R +   Y    D   +F IS+ GD 
Sbjct: 2905 RFASEEYRGSVVENSEPGELVATLKTLDADISEQNRQVTC-YITEGDPLGQFGISQVGDE 2963

Query: 97   --ISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHI 154
              IS  + LD E    Y   V A+D     S TV I V++VND  P+      +L     
Sbjct: 2964 WRISSRKTLDREHTAKYLLRVTASDGKFQASVTVEIFVLDVNDNSPQCS----QLLYTGK 3019

Query: 155  PLADLTPGSVIGKVEAA--DGDKGDRVTLSLRGPYEKMFSINDSGHISIVDLSALNTS-- 210
               D+ PG  I KV A   D D   ++T SL GP    F + D     +  L+AL+    
Sbjct: 3020 VHEDVFPGHFILKVSATDLDTDTNAQITYSLHGPGAHEFKL-DPHTGELTTLTALDRERK 3078

Query: 211  -TIQLVVVATDTGNPPRQASV 230
                LV  ATD G    QA +
Sbjct: 3079 DVFNLVAKATDGGGRSCQADI 3099



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 50/143 (34%), Positives = 76/143 (53%), Gaps = 11/143 (7%)

Query: 95   GDISLMQCLDYETEDSYRFTVYATD----TLMTTSATVNISVVNVNDWDPRFRYPQYELF 150
            G +S  Q LD E +D +   V   D    +L +TS  V + +++VND  P F +  + + 
Sbjct: 1192 GLLSTAQQLDRENKDEHILEVTVLDNGEPSLKSTSRVV-VGILDVNDNPPIFSHKLFNVR 1250

Query: 151  LPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIN-DSGHISIVDLSAL 207
            LP   L+ ++PG V  ++ A+D D+G   RVT S+   YE+ FSI+  +G +S       
Sbjct: 1251 LPER-LSPVSPGPVY-RLVASDLDEGLNGRVTYSIEDSYEEAFSIDLVTGVVSSNSTFTA 1308

Query: 208  NTSTIQLVVVATDTGNPPRQASV 230
                I L + ATD+G PP  ASV
Sbjct: 1309 GEYNI-LTIKATDSGQPPLSASV 1330



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 66/242 (27%), Positives = 104/242 (42%), Gaps = 21/242 (8%)

Query: 10   PITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTT 69
            P TL V+A    +   + LAT+I+    +      FSK+EY V   E++PV   +L V+ 
Sbjct: 1625 PHTLTVKAEDQGSPQWHDLATVIIHVYPSDRSAPIFSKSEYFVEIPESIPVGSPILLVSA 1684

Query: 70   NKPRDLRVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDTLMT-TSATV 128
              P ++  +    N  G     S  G IS  + LD+E   SY+  +  ++     T   V
Sbjct: 1685 MSPSEVTYELREGNKDGVFSMNSYSGLISTQKKLDHEKISSYQLKIRGSNMAGAFTDVMV 1744

Query: 129  NISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGK------VEAADGDKGDRVTLS 182
             + +++ ND  P F       F+  I  A      ++ K      + A+D DK     L 
Sbjct: 1745 VVDIIDENDNAPMFL---KSTFVGQISEAAPLYSMIMDKNNNPFVIHASDSDKEANSLLV 1801

Query: 183  ---LRGPYEKMFSINDS-GHISIV-DLSALNTSTIQLVVVATDTGNP----PRQASVPAI 233
               L     K F I+ S G ++IV ++   +  + Q  V   D G+P    PR A V  I
Sbjct: 1802 YKILEPEALKFFKIDPSMGTLTIVSEMDYESMPSFQFCVYVHDQGSPVLFAPRPAQV--I 1859

Query: 234  MH 235
            +H
Sbjct: 1860 IH 1861



 Score = 47.8 bits (112), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 58/228 (25%), Positives = 99/228 (43%), Gaps = 25/228 (10%)

Query: 28   LATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWL--S 82
            + T++V+    +    QF ++ YS   LEN  V  V+LTV+    + P +  + Y L   
Sbjct: 3304 VTTVMVNITDVNEHRPQFPQDPYSTRVLENALVGDVILTVSATDEDGPLNSDITYSLIGG 3363

Query: 83   NDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWD 139
            N  G      ++G++ + + LD E   SY   + ATD+    +     + I V +VND  
Sbjct: 3364 NQLGHFTIHPKKGELQVAKALDREQASSYSLKLRATDSGQPPLHEDTDIAIQVADVNDNP 3423

Query: 140  PRFRYPQYELFLPHIPLADLTP-GSVIGKVEAADGDKGD-------RVTLSLRGPYEKMF 191
            PRF    Y        + + +P GS + ++  +D D  +       R+T   +G     F
Sbjct: 3424 PRFFQLNYS-----TTVQENSPIGSKVLQLILSDPDSPENGPPYSFRIT---KGNNGSAF 3475

Query: 192  SINDSGHISIVD-LSALNTSTIQLVVVATDTGNPPRQASVPAIMHFPE 238
             +   G +   + LS       QL + A+D+G PP  +     +H  E
Sbjct: 3476 RVTPDGWLVTAEGLSRRAQEWYQLQIQASDSGIPPLSSLTSVRVHVTE 3523



 Score = 45.8 bits (107), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 55/192 (28%), Positives = 84/192 (43%), Gaps = 15/192 (7%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGERFSIS--RQGDISLMQC 102
            F    Y V   EN+ +   +L      P  LR+ Y +  +       +  + G +++   
Sbjct: 2171 FQSPYYKVRVPENITLYTPILHTQARSPEGLRLIYNIVEEEPLMLFTTDFKTGVLTVTGP 2230

Query: 103  LDYETEDSYRFTVYATDTLMT--TSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLT 160
            LDYE++  + FTV ATDT +   + ATV + V +VND  P F    Y   +    L   T
Sbjct: 2231 LDYESKTKHVFTVRATDTALGSFSEATVEVLVEDVNDNPPTFSQLVYTTSISE-GLPAQT 2289

Query: 161  PGSVIGKVEAADGDKGDRVTLSLR-----GPYEKMFSINDS-GHISIV-DLSALNTSTIQ 213
            P   + ++ A+D D G    +S +         K F IN S G +S V +L         
Sbjct: 2290 P---VIQLLASDQDSGRNRDVSYQIVEDGSDVSKFFQINGSTGEMSTVQELDYEAQQHFH 2346

Query: 214  LVVVATDTGNPP 225
            + V A D G+PP
Sbjct: 2347 VKVRAMDKGDPP 2358



 Score = 44.7 bits (104), Expect = 0.088,   Method: Compositional matrix adjust.
 Identities = 52/194 (26%), Positives = 83/194 (42%), Gaps = 23/194 (11%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTTNKP--RDL-RVKYW-LSNDYGERFSI-SRQGDIS 98
            +F + +Y  +  E     +++L V    P  RD  R++Y  LS +    F I S  G IS
Sbjct: 2378 EFRQPQYEANVSELATCGHLVLKVQAIDPDSRDTSRLEYLILSGNQDRHFFINSSSGIIS 2437

Query: 99   LMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLAD 158
            +        + SY   V A+D +   +  V I+  N N + P F+   YE        A+
Sbjct: 2438 MFNLCKKHLDSSYNLRVGASDGVFRATVPVYINTTNANKYSPEFQQHLYE--------AE 2489

Query: 159  LTPGSVIG----KVEAADGDKGDRVTLS---LRGPYEKMFSINDSGHISIVDLSALNTST 211
            L   +++G     + A D D G   T+    +     + FSIN +G I+ +       ST
Sbjct: 2490 LAENAMVGTKVIDLLAIDKDSGPYGTIDYTIINKLASEKFSINPNGQIATLQKLDRENST 2549

Query: 212  ---IQLVVVATDTG 222
               I + V+A D G
Sbjct: 2550 ERVIAIKVMARDGG 2563



 Score = 42.0 bits (97), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 43/154 (27%), Positives = 71/154 (46%), Gaps = 15/154 (9%)

Query: 51  SVSALENLPVNYVLLTVTTNKPR---DLRVKYWLSNDYGER-FSISRQ-GDISLMQCLDY 105
           S+  LE++P+N  L  +    P    + ++ Y +++   E  F I  + G +++   LDY
Sbjct: 721 SIDVLESVPINTPLARLAATDPDAGFNGKLVYVIADGNEEGCFDIELETGLLTVAAPLDY 780

Query: 106 ETEDSYRFTVYATDTLMTTSATVNISVVNVNDWD---PRFRYPQYELFLPHIPLADLTPG 162
           E  + Y   V   D      ++  +  VNV DW+   PRF    Y+L +      D   G
Sbjct: 781 EATNFYILNVTVYDLGTPQKSSWKLLTVNVKDWNDNAPRFPPGGYQLTISE----DTEVG 836

Query: 163 SVIGKVEAADGDKGD--RVTLSLRGPYEKMFSIN 194
           + I ++   D D  D  RV  +L  P EK FS++
Sbjct: 837 TTIAELTTKDADSEDNGRVRYTLLSPTEK-FSLH 869



 Score = 41.6 bits (96), Expect = 0.57,   Method: Compositional matrix adjust.
 Identities = 63/229 (27%), Positives = 99/229 (43%), Gaps = 18/229 (7%)

Query: 10   PITLVVRAIQYDNQDRYA-LATLIVSKAGTSLRELQFSKNEYSVSALENLPVN-YVLLTV 67
            P+ L VRA         + L T+ VS  G       F   E+SV   E+ P    VL   
Sbjct: 3182 PLELTVRASDLGTPIPLSTLGTVTVSVVGLEDYLPVFLNTEHSVQVPEDAPPGTEVLQLA 3241

Query: 68   TTNKPRDLRVKYWL--SNDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDTLMTT 124
            T  +P   +  Y +   N+ G RF + +R G + +   LD+ET   Y  ++  +    ++
Sbjct: 3242 TLTRPGAEKTGYRVVSGNEQG-RFRLDARTGILYVNASLDFETSPKYFLSIECSRKSSSS 3300

Query: 125  S---ATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDK--GDRV 179
                 TV +++ +VN+  P+F    Y   +    L +   G VI  V A D D      +
Sbjct: 3301 LSDVTTVMVNITDVNEHRPQFPQDPYSTRV----LENALVGDVILTVSATDEDGPLNSDI 3356

Query: 180  TLSLRGPYE-KMFSIN-DSGHISIVD-LSALNTSTIQLVVVATDTGNPP 225
            T SL G  +   F+I+   G + +   L     S+  L + ATD+G PP
Sbjct: 3357 TYSLIGGNQLGHFTIHPKKGELQVAKALDREQASSYSLKLRATDSGQPP 3405



 Score = 41.2 bits (95), Expect = 0.85,   Method: Compositional matrix adjust.
 Identities = 39/133 (29%), Positives = 68/133 (51%), Gaps = 14/133 (10%)

Query: 95   GDISLMQCLDYETEDSYRFTVYATDT-----LMTTSATVNISVVNVNDWDPRFRYPQYEL 149
            G ++++  +DYE+  S++F VY  D           A V I V +VND  PRF    YE+
Sbjct: 1820 GTLTIVSEMDYESMPSFQFCVYVHDQGSPVLFAPRPAQVIIHVRDVNDSPPRFSEQIYEV 1879

Query: 150  FLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSIND-SGHISIVDLSAL 207
             +    +  + PG  +  V A+D D    V  S++ G  ++  +I+  +G IS+++ + L
Sbjct: 1880 AI----VGPIHPGMELLMVRASDEDS--EVNYSIKTGNADEAVTIHPVTGSISVLNPAFL 1933

Query: 208  NTSTIQLVVVATD 220
              S  +L + A+D
Sbjct: 1934 GLSR-KLTIRASD 1945



 Score = 40.4 bits (93), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 58/202 (28%), Positives = 84/202 (41%), Gaps = 24/202 (11%)

Query: 41   RELQFSKNEYSVSALENLPVN--YVLLTVTTNKPRDLRVKYWLSNDYGERFSISRQGDIS 98
            + LQF ++ Y  +  ENL      V+L    N   D  + Y+L N       +   G + 
Sbjct: 1964 KSLQFDQDVYWAAVKENLQDRKALVILGAQGNHLNDT-LSYFLLNGTDMFHMVQSAGVLQ 2022

Query: 99   LMQ-CLDYETEDSYRFTVYATDTLM---TTSATVNISVVNVNDWDPRFRY-PQYELFLPH 153
                  D E +D++   V   D           V +S+ +VND  P+F++ P Y +    
Sbjct: 2023 TRGVAFDREQQDTHELAVEVRDNRTPQRVAQGLVRVSIEDVNDNPPKFKHLPYYTI---- 2078

Query: 154  IPLADLT-PGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDS-GHISI---VDLSA 206
              + D T PG V+ +V A D D G    VT      Y   F I+   G IS+    D  A
Sbjct: 2079 --IQDGTEPGDVLFQVSATDEDLGTNGAVTYEFAEDY-TYFRIDPYLGDISLKKPFDYQA 2135

Query: 207  LNTSTIQLVVVATDTGNPPRQA 228
            LN     L V+A D G P  Q+
Sbjct: 2136 LN--KYHLKVIARDGGTPSLQS 2155



 Score = 38.1 bits (87), Expect = 7.2,   Method: Compositional matrix adjust.
 Identities = 55/197 (27%), Positives = 89/197 (45%), Gaps = 23/197 (11%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTTNKPRD------LRVKYWLSNDYGERFSISRQ-GD 96
            +FS+  Y+ SA E+LP    +  V     +D      +R     SN  G  FS+    G 
Sbjct: 2690 KFSEPLYTFSAPEDLPEGSEIGIVKAVAAQDPVIYSLVRGTTPESNKDG-VFSLDPDTGV 2748

Query: 97   ISLMQCLDYETEDSYRFTVYA---TDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
            I + + +D+E+   Y+  V A    +T + +  +VNI V +VND  P F    Y+  L  
Sbjct: 2749 IKVRKPMDHESTKLYQIDVMAHCLQNTDVVSLVSVNIQVGDVNDNRPVFEADPYKAVL-- 2806

Query: 154  IPLADLTPGSVIGKVEAADGDKGDRVTLSLR------GPYEKMFSIN-DSGHISIV-DLS 205
                ++  G+ + +V A D D G    +S R          ++F+I+ +SG I+ + +L 
Sbjct: 2807 --TENMPVGTSVIQVTAIDKDTGRDGQVSYRLSADPGSNVHELFAIDSESGWITTLQELD 2864

Query: 206  ALNTSTIQLVVVATDTG 222
                 T    VVA D G
Sbjct: 2865 CETCQTYHFHVVAYDHG 2881


>gi|13787217|ref|NP_001438.1| protocadherin Fat 2 precursor [Homo sapiens]
 gi|296434503|sp|Q9NYQ8.2|FAT2_HUMAN RecName: Full=Protocadherin Fat 2; Short=hFat2; AltName:
            Full=Cadherin family member 8; AltName: Full=Multiple
            epidermal growth factor-like domains protein 1;
            Short=Multiple EGF-like domains protein 1; Flags:
            Precursor
          Length = 4349

 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 52/193 (26%), Positives = 90/193 (46%), Gaps = 21/193 (10%)

Query: 43   LQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGER---FSISRQ-GDIS 98
            L F +  YS + +E  PVN+++  ++      L   +W +   G++   F I +  G I 
Sbjct: 1347 LAFDETYYSFTVMETDPVNHMVGVISVEGRPGL---FWFNISGGDKDMDFDIEKTTGSIV 1403

Query: 99   LMQCLDYETEDSYRFTVYATDTLMTTSATVNISVV-NVNDWDPRFRYPQYELFLPHIPLA 157
            + + LD     +Y  TV  TD   T +  V+I ++ N+N   P+F   +YE+ +P     
Sbjct: 1404 IARPLDTRRRSNYNLTVEVTDGSRTIATQVHIFMIANINHHRPQFLETRYEVRVPQ---- 1459

Query: 158  DLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSGHISIVDLSALNTSTIQLVVV 217
            D  PG  + +V+A D DKG  +  ++ G         D G  S+  L    +S + + V 
Sbjct: 1460 DTVPGVELLRVQAIDQDKGKSLIYTIHGS-------QDPGSASLFQLDP--SSGVLVTVG 1510

Query: 218  ATDTGNPPRQASV 230
              D G+ P Q ++
Sbjct: 1511 KLDLGSGPSQHTL 1523



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/142 (31%), Positives = 69/142 (48%), Gaps = 16/142 (11%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYG----ERFSI-SRQGD 96
            F  + Y     EN+PV   ++ VT    +  RD +V Y LS D G    E F+I S  G 
Sbjct: 2797 FEADPYKAVLTENMPVGTSVIQVTAIDKDTGRDGQVSYRLSADPGSNVHELFAIDSESGW 2856

Query: 97   ISLMQCLDYETEDSYRFTVYATD----TLMTTSATVNISVVNVNDWDPRFRYPQYELFLP 152
            I+ +Q LD ET  +Y F V A D      +++ A V +S+ + ND  PRF   +Y   + 
Sbjct: 2857 ITTLQELDCETCQTYHFHVVAYDHGQTIQLSSQALVQVSITDENDNAPRFASEEYRGSV- 2915

Query: 153  HIPLADLTPGSVIGKVEAADGD 174
               + +  PG ++  ++  D D
Sbjct: 2916 ---VENSEPGELVATLKTLDAD 2934



 Score = 55.5 bits (132), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 62/201 (30%), Positives = 86/201 (42%), Gaps = 20/201 (9%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTT------NKPRDLRVKYWLSNDYGERFSISRQGD- 96
            +F+  EY  S +EN     ++ T+ T       + R +   Y    D   +F IS+ GD 
Sbjct: 2905 RFASEEYRGSVVENSEPGELVATLKTLDADISEQNRQVTC-YITEGDPLGQFGISQVGDE 2963

Query: 97   --ISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHI 154
              IS  + LD E    Y   V A+D     S TV I V++VND  P+      +L     
Sbjct: 2964 WRISSRKTLDREHTAKYLLRVTASDGKFQASVTVEIFVLDVNDNSPQCS----QLLYTGK 3019

Query: 155  PLADLTPGSVIGKVEAA--DGDKGDRVTLSLRGPYEKMFSINDSGHISIVDLSALNTS-- 210
               D+ PG  I KV A   D D   ++T SL GP    F + D     +  L+AL+    
Sbjct: 3020 VHEDVFPGHFILKVSATDLDTDTNAQITYSLHGPGAHEFKL-DPHTGELTTLTALDRERK 3078

Query: 211  -TIQLVVVATDTGNPPRQASV 230
                LV  ATD G    QA +
Sbjct: 3079 DVFNLVAKATDGGGRSCQADI 3099



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 66/242 (27%), Positives = 104/242 (42%), Gaps = 21/242 (8%)

Query: 10   PITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTT 69
            P TL V+A    +   + LAT+I+    +      FSK+EY V   E++PV   +L V+ 
Sbjct: 1625 PHTLTVKAEDQGSPQWHDLATVIIHVYPSDRSAPIFSKSEYFVEIPESIPVGSPILLVSA 1684

Query: 70   NKPRDLRVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDTLMT-TSATV 128
              P ++  +    N  G     S  G IS  + LD+E   SY+  +  ++     T   V
Sbjct: 1685 MSPSEVTYELREGNKDGVFSMNSYSGLISTQKKLDHEKISSYQLKIRGSNMAGAFTDVMV 1744

Query: 129  NISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGK------VEAADGDKGDRVTLS 182
             + +++ ND  P F       F+  I  A      ++ K      + A+D DK     L 
Sbjct: 1745 VVDIIDENDNAPMFL---KSTFVGQISEAAPLYSMIMDKNNNPFVIHASDSDKEANSLLV 1801

Query: 183  ---LRGPYEKMFSINDS-GHISIV-DLSALNTSTIQLVVVATDTGNP----PRQASVPAI 233
               L     K F I+ S G ++IV ++   +  + Q  V   D G+P    PR A V  I
Sbjct: 1802 YKILEPEALKFFKIDPSMGTLTIVSEMDYESMPSFQFCVYVHDQGSPVLFAPRPAQV--I 1859

Query: 234  MH 235
            +H
Sbjct: 1860 IH 1861



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 49/143 (34%), Positives = 75/143 (52%), Gaps = 11/143 (7%)

Query: 95   GDISLMQCLDYETEDSYRFTVYATD----TLMTTSATVNISVVNVNDWDPRFRYPQYELF 150
            G +S  Q LD E +D +   V   D    +L +TS  V + +++VND  P F +  + + 
Sbjct: 1192 GLLSTAQQLDRENKDEHILEVTVLDNGEPSLKSTSRVV-VGILDVNDNPPIFSHKLFNVR 1250

Query: 151  LPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIN-DSGHISIVDLSAL 207
            LP   L+ ++PG V  ++ A+D D+G   RVT S+    E+ FSI+  +G +S       
Sbjct: 1251 LPER-LSPVSPGPVY-RLVASDLDEGLNGRVTYSIEDSDEEAFSIDLVTGVVSSSSTFTA 1308

Query: 208  NTSTIQLVVVATDTGNPPRQASV 230
                I L + ATD+G PP  ASV
Sbjct: 1309 GEYNI-LTIKATDSGQPPLSASV 1330



 Score = 47.8 bits (112), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 58/228 (25%), Positives = 99/228 (43%), Gaps = 25/228 (10%)

Query: 28   LATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWL--S 82
            + T++V+    +    QF ++ YS   LEN  V  V+LTV+    + P +  + Y L   
Sbjct: 3304 VTTVMVNITDVNEHRPQFPQDPYSTRVLENALVGDVILTVSATDEDGPLNSDITYSLIGG 3363

Query: 83   NDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWD 139
            N  G      ++G++ + + LD E   SY   + ATD+    +     + I V +VND  
Sbjct: 3364 NQLGHFTIHPKKGELQVAKALDREQASSYSLKLRATDSGQPPLHEDTDIAIQVADVNDNP 3423

Query: 140  PRFRYPQYELFLPHIPLADLTP-GSVIGKVEAADGDKGD-------RVTLSLRGPYEKMF 191
            PRF    Y        + + +P GS + ++  +D D  +       R+T   +G     F
Sbjct: 3424 PRFFQLNYS-----TTVQENSPIGSKVLQLILSDPDSPENGPPYSFRIT---KGNNGSAF 3475

Query: 192  SINDSGHISIVD-LSALNTSTIQLVVVATDTGNPPRQASVPAIMHFPE 238
             +   G +   + LS       QL + A+D+G PP  +     +H  E
Sbjct: 3476 RVTPDGWLVTAEGLSRRAQEWYQLQIQASDSGIPPLSSLTSVRVHVTE 3523



 Score = 45.8 bits (107), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 55/192 (28%), Positives = 84/192 (43%), Gaps = 15/192 (7%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGERFSIS--RQGDISLMQC 102
            F    Y V   EN+ +   +L      P  LR+ Y +  +       +  + G +++   
Sbjct: 2171 FQSPYYKVRVPENITLYTPILHTQARSPEGLRLIYNIVEEEPLMLFTTDFKTGVLTVTGP 2230

Query: 103  LDYETEDSYRFTVYATDTLMT--TSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLT 160
            LDYE++  + FTV ATDT +   + ATV + V +VND  P F    Y   +    L   T
Sbjct: 2231 LDYESKTKHVFTVRATDTALGSFSEATVEVLVEDVNDNPPTFSQLVYTTSISE-GLPAQT 2289

Query: 161  PGSVIGKVEAADGDKGDRVTLSLR-----GPYEKMFSINDS-GHISIV-DLSALNTSTIQ 213
            P   + ++ A+D D G    +S +         K F IN S G +S V +L         
Sbjct: 2290 P---VIQLLASDQDSGRNRDVSYQIVEDGSDVSKFFQINGSTGEMSTVQELDYEAQQHFH 2346

Query: 214  LVVVATDTGNPP 225
            + V A D G+PP
Sbjct: 2347 VKVRAMDKGDPP 2358



 Score = 44.3 bits (103), Expect = 0.088,   Method: Compositional matrix adjust.
 Identities = 52/194 (26%), Positives = 83/194 (42%), Gaps = 23/194 (11%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTTNKP--RDL-RVKYW-LSNDYGERFSI-SRQGDIS 98
            +F + +Y  +  E     +++L V    P  RD  R++Y  LS +    F I S  G IS
Sbjct: 2378 EFRQPQYEANVSELATCGHLVLKVQAIDPDSRDTSRLEYLILSGNQDRHFFINSSSGIIS 2437

Query: 99   LMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLAD 158
            +        + SY   V A+D +   +  V I+  N N + P F+   YE        A+
Sbjct: 2438 MFNLCKKHLDSSYNLRVGASDGVFRATVPVYINTTNANKYSPEFQQHLYE--------AE 2489

Query: 159  LTPGSVIG----KVEAADGDKGDRVTLS---LRGPYEKMFSINDSGHISIVDLSALNTST 211
            L   +++G     + A D D G   T+    +     + FSIN +G I+ +       ST
Sbjct: 2490 LAENAMVGTKVIDLLAIDKDSGPYGTIDYTIINKLASEKFSINPNGQIATLQKLDRENST 2549

Query: 212  ---IQLVVVATDTG 222
               I + V+A D G
Sbjct: 2550 ERVIAIKVMARDGG 2563



 Score = 42.0 bits (97), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 43/154 (27%), Positives = 71/154 (46%), Gaps = 15/154 (9%)

Query: 51  SVSALENLPVNYVLLTVTTNKPR---DLRVKYWLSNDYGER-FSISRQ-GDISLMQCLDY 105
           S+  LE++P+N  L  +    P    + ++ Y +++   E  F I  + G +++   LDY
Sbjct: 721 SIDVLESVPINTPLARLAATDPDAGFNGKLVYVIADGNEEGCFDIELETGLLTVAAPLDY 780

Query: 106 ETEDSYRFTVYATDTLMTTSATVNISVVNVNDWD---PRFRYPQYELFLPHIPLADLTPG 162
           E  + Y   V   D      ++  +  VNV DW+   PRF    Y+L +      D   G
Sbjct: 781 EATNFYILNVTVYDLGTPQKSSWKLLTVNVKDWNDNAPRFPPGGYQLTISE----DTEVG 836

Query: 163 SVIGKVEAADGDKGD--RVTLSLRGPYEKMFSIN 194
           + I ++   D D  D  RV  +L  P EK FS++
Sbjct: 837 TTIAELTTKDADSEDNGRVRYTLLSPTEK-FSLH 869



 Score = 41.6 bits (96), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 63/229 (27%), Positives = 99/229 (43%), Gaps = 18/229 (7%)

Query: 10   PITLVVRAIQYDNQDRYA-LATLIVSKAGTSLRELQFSKNEYSVSALENLPVN-YVLLTV 67
            P+ L VRA         + L T+ VS  G       F   E+SV   E+ P    VL   
Sbjct: 3182 PLELTVRASDLGTPIPLSTLGTVTVSVVGLEDYLPVFLNTEHSVQVPEDAPPGTEVLQLA 3241

Query: 68   TTNKPRDLRVKYWL--SNDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDTLMTT 124
            T  +P   +  Y +   N+ G RF + +R G + +   LD+ET   Y  ++  +    ++
Sbjct: 3242 TLTRPGAEKTGYRVVSGNEQG-RFRLDARTGILYVNASLDFETSPKYFLSIECSRKSSSS 3300

Query: 125  S---ATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDK--GDRV 179
                 TV +++ +VN+  P+F    Y   +    L +   G VI  V A D D      +
Sbjct: 3301 LSDVTTVMVNITDVNEHRPQFPQDPYSTRV----LENALVGDVILTVSATDEDGPLNSDI 3356

Query: 180  TLSLRGPYE-KMFSIN-DSGHISIVD-LSALNTSTIQLVVVATDTGNPP 225
            T SL G  +   F+I+   G + +   L     S+  L + ATD+G PP
Sbjct: 3357 TYSLIGGNQLGHFTIHPKKGELQVAKALDREQASSYSLKLRATDSGQPP 3405



 Score = 41.2 bits (95), Expect = 0.88,   Method: Compositional matrix adjust.
 Identities = 39/133 (29%), Positives = 68/133 (51%), Gaps = 14/133 (10%)

Query: 95   GDISLMQCLDYETEDSYRFTVYATDT-----LMTTSATVNISVVNVNDWDPRFRYPQYEL 149
            G ++++  +DYE+  S++F VY  D           A V I V +VND  PRF    YE+
Sbjct: 1820 GTLTIVSEMDYESMPSFQFCVYVHDQGSPVLFAPRPAQVIIHVRDVNDSPPRFSEQIYEV 1879

Query: 150  FLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSIND-SGHISIVDLSAL 207
             +    +  + PG  +  V A+D D    V  S++ G  ++  +I+  +G IS+++ + L
Sbjct: 1880 AI----VGPIHPGMELLMVRASDEDS--EVNYSIKTGNADEAVTIHPVTGSISVLNPAFL 1933

Query: 208  NTSTIQLVVVATD 220
              S  +L + A+D
Sbjct: 1934 GLSR-KLTIRASD 1945



 Score = 40.0 bits (92), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 58/202 (28%), Positives = 84/202 (41%), Gaps = 24/202 (11%)

Query: 41   RELQFSKNEYSVSALENLPVN--YVLLTVTTNKPRDLRVKYWLSNDYGERFSISRQGDIS 98
            + LQF ++ Y  +  ENL      V+L    N   D  + Y+L N       +   G + 
Sbjct: 1964 KSLQFDQDVYWAAVKENLQDRKALVILGAQGNHLNDT-LSYFLLNGTDMFHMVQSAGVLQ 2022

Query: 99   LMQ-CLDYETEDSYRFTVYATDTLM---TTSATVNISVVNVNDWDPRFRY-PQYELFLPH 153
                  D E +D++   V   D           V +S+ +VND  P+F++ P Y +    
Sbjct: 2023 TRGVAFDREQQDTHELAVEVRDNRTPQRVAQGLVRVSIEDVNDNPPKFKHLPYYTI---- 2078

Query: 154  IPLADLT-PGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDS-GHISI---VDLSA 206
              + D T PG V+ +V A D D G    VT      Y   F I+   G IS+    D  A
Sbjct: 2079 --IQDGTEPGDVLFQVSATDEDLGTNGAVTYEFAEDY-TYFRIDPYLGDISLKKPFDYQA 2135

Query: 207  LNTSTIQLVVVATDTGNPPRQA 228
            LN     L V+A D G P  Q+
Sbjct: 2136 LN--KYHLKVIARDGGTPSLQS 2155



 Score = 38.1 bits (87), Expect = 7.0,   Method: Compositional matrix adjust.
 Identities = 55/197 (27%), Positives = 89/197 (45%), Gaps = 23/197 (11%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTTNKPRD------LRVKYWLSNDYGERFSISRQ-GD 96
            +FS+  Y+ SA E+LP    +  V     +D      +R     SN  G  FS+    G 
Sbjct: 2690 KFSEPLYTFSAPEDLPEGSEIGIVKAVAAQDPVIYSLVRGTTPESNKDG-VFSLDPDTGV 2748

Query: 97   ISLMQCLDYETEDSYRFTVYA---TDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
            I + + +D+E+   Y+  V A    +T + +  +VNI V +VND  P F    Y+  L  
Sbjct: 2749 IKVRKPMDHESTKLYQIDVMAHCLQNTDVVSLVSVNIQVGDVNDNRPVFEADPYKAVL-- 2806

Query: 154  IPLADLTPGSVIGKVEAADGDKGDRVTLSLR------GPYEKMFSIN-DSGHISIV-DLS 205
                ++  G+ + +V A D D G    +S R          ++F+I+ +SG I+ + +L 
Sbjct: 2807 --TENMPVGTSVIQVTAIDKDTGRDGQVSYRLSADPGSNVHELFAIDSESGWITTLQELD 2864

Query: 206  ALNTSTIQLVVVATDTG 222
                 T    VVA D G
Sbjct: 2865 CETCQTYHFHVVAYDHG 2881


>gi|344275023|ref|XP_003409313.1| PREDICTED: protocadherin-15 isoform 7 [Loxodonta africana]
          Length = 1918

 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 67/242 (27%), Positives = 112/242 (46%), Gaps = 29/242 (11%)

Query: 6   DFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVL- 64
           DF Q   LV++A Q +     A A+L +     + +   F+   Y    LE+ PV   + 
Sbjct: 334 DFHQKFDLVIKAEQDNGHPLPAFASLHIEILDENNQSPYFTMPAYQGYILESAPVGSTIS 393

Query: 65  --LTVTT-----------NKPRDLRVKYWLSNDYGERFSISRQG---DISLMQCLDYETE 108
             L +TT              +D  V  +L NDY   F++++ G    ++L+Q +D E +
Sbjct: 394 DSLNLTTPLRIIVLDKDVEDTKDPEVHLFL-NDYTSVFTVTQTGITRYLTLLQPVDREEQ 452

Query: 109 DSYRFTVYATDTLMTTSAT-VNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGK 167
            +Y F++ A D +  +    VNI V++ ND  P F    YE+++      D++PG  + +
Sbjct: 453 QTYTFSITAFDGVQESEPVIVNIQVMDANDNTPTFPEISYEVYV----YTDMSPGDSVIQ 508

Query: 168 VEAADGDKGD--RVTLSLRGPYEKMFSIND-SGHISIV-DLSALNTSTIQLVVVATDTGN 223
           + A D D+G    +T  +    +  F IN  +G I+I   +  +   T  L V A D  N
Sbjct: 509 LTAVDADEGSNGEITYEILVGDQGDFIINKTTGLITIAPGVELIVGRTYALTVQAAD--N 566

Query: 224 PP 225
           PP
Sbjct: 567 PP 568



 Score = 48.9 bits (115), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 70/233 (30%), Positives = 102/233 (43%), Gaps = 26/233 (11%)

Query: 13  LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKP 72
           LVV A       R++  TL +           F+ + Y+V   ENLP     L +   K 
Sbjct: 765 LVVVATDGAVHPRHSTLTLAIKVLDIDDNSPVFTNSTYTVVVEENLPAGTTFLKIEA-KD 823

Query: 73  RDL--RVKYWLSNDYGERFSISR--QGDISLMQCLDYET----EDSYRFTVYATD---TL 121
            DL   V Y + +   + F       G++SL++ LDYE     E +  F V A D   T+
Sbjct: 824 VDLGANVSYRIRSPEVKHFFALHPFTGELSLLRSLDYEAFPEQEATITFLVEAFDIYGTM 883

Query: 122 MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDK----GD 177
               ATV + V ++ND+ P F    Y+  +      D   G+ I  V A D D       
Sbjct: 884 PPGIATVTVIVKDMNDYPPVFNKRIYKGMV----APDAVKGTPITTVYAEDADPPGLPAS 939

Query: 178 RVTL---SLRGPY-EKMFSI-NDSGH-ISIVDLSALNTSTIQLVVVATDTGNP 224
           RV      ++ PY   +F +  DSG  I+ V+L+   T+  +LVVVA D G P
Sbjct: 940 RVRYRVDDVQFPYPASIFDVVEDSGLVITRVNLNEEPTTIFKLVVVAFDDGEP 992



 Score = 46.6 bits (109), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 53/193 (27%), Positives = 94/193 (48%), Gaps = 10/193 (5%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGER-FSISRQ-GDISLMQ 101
           +F +  YS+   E + +  VLL +         + Y + N   +R F++S   G ++L +
Sbjct: 593 RFPQLMYSLEISEAMRIGAVLLNLQATDREGDPITYAIENGDPQRVFNLSENTGILTLGK 652

Query: 102 CLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLP-HIPLADLT 160
            LD E+ D Y   V A+D     ++T  ++VV  +        P ++ +LP ++ + +  
Sbjct: 653 ALDRESTDRYILIVTASDGRPDGTSTATVNVVVTDV---NDNAPVFDPYLPRNLSVVEEE 709

Query: 161 PGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDSGHI-SIVDLSALNTSTIQLVVV 217
             + +G+V A D D G   +V  SL G +  +F I  +G I + V L+       +LVVV
Sbjct: 710 ANAFVGQVRATDPDAGINGQVHYSL-GNFNNLFRITSNGSIYTAVKLNREVRDYYELVVV 768

Query: 218 ATDTGNPPRQASV 230
           ATD    PR +++
Sbjct: 769 ATDGAVHPRHSTL 781



 Score = 45.8 bits (107), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 50/171 (29%), Positives = 80/171 (46%), Gaps = 17/171 (9%)

Query: 76  RVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDTLMT---TSATVNISV 132
           +V Y L N +   F I+  G I     L+ E  D Y   V ATD  +    ++ T+ I V
Sbjct: 729 QVHYSLGN-FNNLFRITSNGSIYTAVKLNREVRDYYELVVVATDGAVHPRHSTLTLAIKV 787

Query: 133 VNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEK-MF 191
           ++++D  P F    Y + +      +L  G+   K+EA D D G  V+  +R P  K  F
Sbjct: 788 LDIDDNSPVFTNSTYTVVVEE----NLPAGTTFLKIEAKDVDLGANVSYRIRSPEVKHFF 843

Query: 192 SIND-SGHISI---VDLSAL--NTSTIQLVVVATDTGN--PPRQASVPAIM 234
           +++  +G +S+   +D  A     +TI  +V A D     PP  A+V  I+
Sbjct: 844 ALHPFTGELSLLRSLDYEAFPEQEATITFLVEAFDIYGTMPPGIATVTVIV 894


>gi|344275013|ref|XP_003409308.1| PREDICTED: protocadherin-15 isoform 2 [Loxodonta africana]
          Length = 1945

 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 67/242 (27%), Positives = 112/242 (46%), Gaps = 29/242 (11%)

Query: 6   DFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVL- 64
           DF Q   LV++A Q +     A A+L +     + +   F+   Y    LE+ PV   + 
Sbjct: 361 DFHQKFDLVIKAEQDNGHPLPAFASLHIEILDENNQSPYFTMPAYQGYILESAPVGSTIS 420

Query: 65  --LTVTT-----------NKPRDLRVKYWLSNDYGERFSISRQG---DISLMQCLDYETE 108
             L +TT              +D  V  +L NDY   F++++ G    ++L+Q +D E +
Sbjct: 421 DSLNLTTPLRIIVLDKDVEDTKDPEVHLFL-NDYTSVFTVTQTGITRYLTLLQPVDREEQ 479

Query: 109 DSYRFTVYATDTLMTTSAT-VNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGK 167
            +Y F++ A D +  +    VNI V++ ND  P F    YE+++      D++PG  + +
Sbjct: 480 QTYTFSITAFDGVQESEPVIVNIQVMDANDNTPTFPEISYEVYV----YTDMSPGDSVIQ 535

Query: 168 VEAADGDKGD--RVTLSLRGPYEKMFSIND-SGHISIV-DLSALNTSTIQLVVVATDTGN 223
           + A D D+G    +T  +    +  F IN  +G I+I   +  +   T  L V A D  N
Sbjct: 536 LTAVDADEGSNGEITYEILVGDQGDFIINKTTGLITIAPGVELIVGRTYALTVQAAD--N 593

Query: 224 PP 225
           PP
Sbjct: 594 PP 595



 Score = 48.9 bits (115), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 70/233 (30%), Positives = 102/233 (43%), Gaps = 26/233 (11%)

Query: 13   LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKP 72
            LVV A       R++  TL +           F+ + Y+V   ENLP     L +   K 
Sbjct: 792  LVVVATDGAVHPRHSTLTLAIKVLDIDDNSPVFTNSTYTVVVEENLPAGTTFLKIEA-KD 850

Query: 73   RDL--RVKYWLSNDYGERFSISR--QGDISLMQCLDYET----EDSYRFTVYATD---TL 121
             DL   V Y + +   + F       G++SL++ LDYE     E +  F V A D   T+
Sbjct: 851  VDLGANVSYRIRSPEVKHFFALHPFTGELSLLRSLDYEAFPEQEATITFLVEAFDIYGTM 910

Query: 122  MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDK----GD 177
                ATV + V ++ND+ P F    Y+  +      D   G+ I  V A D D       
Sbjct: 911  PPGIATVTVIVKDMNDYPPVFNKRIYKGMV----APDAVKGTPITTVYAEDADPPGLPAS 966

Query: 178  RVTL---SLRGPY-EKMFSI-NDSGH-ISIVDLSALNTSTIQLVVVATDTGNP 224
            RV      ++ PY   +F +  DSG  I+ V+L+   T+  +LVVVA D G P
Sbjct: 967  RVRYRVDDVQFPYPASIFDVVEDSGLVITRVNLNEEPTTIFKLVVVAFDDGEP 1019



 Score = 46.6 bits (109), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 53/193 (27%), Positives = 94/193 (48%), Gaps = 10/193 (5%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGER-FSISRQ-GDISLMQ 101
           +F +  YS+   E + +  VLL +         + Y + N   +R F++S   G ++L +
Sbjct: 620 RFPQLMYSLEISEAMRIGAVLLNLQATDREGDPITYAIENGDPQRVFNLSENTGILTLGK 679

Query: 102 CLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLP-HIPLADLT 160
            LD E+ D Y   V A+D     ++T  ++VV  +        P ++ +LP ++ + +  
Sbjct: 680 ALDRESTDRYILIVTASDGRPDGTSTATVNVVVTDV---NDNAPVFDPYLPRNLSVVEEE 736

Query: 161 PGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDSGHI-SIVDLSALNTSTIQLVVV 217
             + +G+V A D D G   +V  SL G +  +F I  +G I + V L+       +LVVV
Sbjct: 737 ANAFVGQVRATDPDAGINGQVHYSL-GNFNNLFRITSNGSIYTAVKLNREVRDYYELVVV 795

Query: 218 ATDTGNPPRQASV 230
           ATD    PR +++
Sbjct: 796 ATDGAVHPRHSTL 808



 Score = 45.8 bits (107), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 50/171 (29%), Positives = 80/171 (46%), Gaps = 17/171 (9%)

Query: 76  RVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDTLMT---TSATVNISV 132
           +V Y L N +   F I+  G I     L+ E  D Y   V ATD  +    ++ T+ I V
Sbjct: 756 QVHYSLGN-FNNLFRITSNGSIYTAVKLNREVRDYYELVVVATDGAVHPRHSTLTLAIKV 814

Query: 133 VNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEK-MF 191
           ++++D  P F    Y + +      +L  G+   K+EA D D G  V+  +R P  K  F
Sbjct: 815 LDIDDNSPVFTNSTYTVVVEE----NLPAGTTFLKIEAKDVDLGANVSYRIRSPEVKHFF 870

Query: 192 SIND-SGHISI---VDLSAL--NTSTIQLVVVATDTGN--PPRQASVPAIM 234
           +++  +G +S+   +D  A     +TI  +V A D     PP  A+V  I+
Sbjct: 871 ALHPFTGELSLLRSLDYEAFPEQEATITFLVEAFDIYGTMPPGIATVTVIV 921


>gi|327270437|ref|XP_003219996.1| PREDICTED: protocadherin beta-16-like [Anolis carolinensis]
          Length = 806

 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 52/153 (33%), Positives = 78/153 (50%), Gaps = 18/153 (11%)

Query: 92  SRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYP-QY 147
           S  G++  ++ LDYE    ++ TV ATD     +++ A V + V++ ND  P F YP Q 
Sbjct: 505 SETGNMYALRSLDYEQIKDFKITVRATDGGIPSLSSDAFVRVMVIDENDNPPFFLYPLQN 564

Query: 148 ELFLPHIPLADLTP-----GSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-DSGH 198
             F    P  +L P     G +I KV A DGD G    LS   L+     +FSI   +G 
Sbjct: 565 STF----PCNELLPKMAEGGYLITKVVAVDGDSGQNSWLSYEILKATDPGLFSIGAQNGE 620

Query: 199 ISIVD-LSALNTSTIQLVVVATDTGNPPRQASV 230
           +     L+  ++S  +LV+VA D G PP+ ++V
Sbjct: 621 VKTRRPLTERDSSKQRLVIVAKDNGVPPQTSTV 653



 Score = 42.0 bits (97), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 50/197 (25%), Positives = 81/197 (41%), Gaps = 23/197 (11%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTTNKPRDL------RVKYWLSNDYGERFSI----SR 93
            F+++EY V   EN P + +   VT  + RDL       +KY+      E   +      
Sbjct: 237 HFTQSEYKVRLKENSPRDTL---VTKVEARDLDFGSNAEIKYFFHRVPDEVLGLFHLNEM 293

Query: 94  QGDISLMQCLDYETEDSYRFTVYATD-TLMTTSATVNISVVNVNDWDPRFRYPQYELFLP 152
            GDI++   +DYE E SY  ++ ATD   ++      I V +VND  P       +  +P
Sbjct: 294 TGDITVFGEIDYEKETSYDMSIKATDGGGLSGHCKAFIEVEDVNDNAPEVSIISLKNIIP 353

Query: 153 HIPLADLTPGSVIGKVEAADGDKGDR----VTLSLRGPYEKMFSINDSGHISI-VDLSAL 207
                D    +V+      D D GD      ++ +  P+    + N+   + I   L   
Sbjct: 354 E----DSPLETVVALFSVTDEDSGDNGKTSCSVEMTLPFVLKATKNNFYQLVIQTPLDRE 409

Query: 208 NTSTIQLVVVATDTGNP 224
           N S   + + A D G+P
Sbjct: 410 NVSEYNVTITAIDRGSP 426



 Score = 42.0 bits (97), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 52/199 (26%), Positives = 90/199 (45%), Gaps = 25/199 (12%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVK----YWLSNDYGERFSISRQGDISL 99
           +FSK E+ +   EN+P N + L + + K  DL       Y LS +   R  +    D S+
Sbjct: 128 RFSKKEFDLEVPENVPRN-MKLPLESAKDEDLGKNTIQNYTLSPNEHFRLDVENNKDGSM 186

Query: 100 M------QCLDYETEDSYRFTVYATDTLM---TTSATVNISVVNVNDWDPRFRYPQYELF 150
                  + LD   +  +  T+ A D  +   T +  +NI V++ ND  P F   +Y++ 
Sbjct: 187 YVDLIVEKALDRGKDPFFGLTLTAVDGGIPQRTGTVKINIKVLDNNDNSPHFTQSEYKVR 246

Query: 151 LPHIPLADLTPGSVIGKVEAADGDKGDRVTLSL---RGPYE--KMFSIND-SGHISIV-D 203
           L      D    +++ KVEA D D G    +     R P E   +F +N+ +G I++  +
Sbjct: 247 LKENSPRD----TLVTKVEARDLDFGSNAEIKYFFHRVPDEVLGLFHLNEMTGDITVFGE 302

Query: 204 LSALNTSTIQLVVVATDTG 222
           +     ++  + + ATD G
Sbjct: 303 IDYEKETSYDMSIKATDGG 321


>gi|224052330|ref|XP_002193468.1| PREDICTED: cadherin-related family member 1 [Taeniopygia guttata]
          Length = 865

 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 62/185 (33%), Positives = 89/185 (48%), Gaps = 15/185 (8%)

Query: 52  VSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGER--FSISR-QGDISLMQCLDYETE 108
           +S  E+ PV   + T+    P    V Y L+ + G R  FS+ +  G+++L++ LD E E
Sbjct: 44  LSLSEDTPVGTHVYTLNGTDPEGDPVTYGLTYEAGSRRYFSVDKNHGNVTLIEELDREKE 103

Query: 109 DSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTP-GSVIGK 167
           D     V  +D L T S  V I V++ ND  P F    Y + +P     + TP  S I K
Sbjct: 104 DEIEVIVSISDGLSTVSEKVRILVMDANDESPEFINTPYIVQVP-----ENTPSSSSIFK 158

Query: 168 VEAADGD--KGDRVTLSLRGPYEKMFSIN-DSGHISI---VDLSALNTSTIQLVVVATDT 221
           VEA D D   G  +T  L+  +   F+I+  SG + I   V L    + T  +VVVA D 
Sbjct: 159 VEAIDKDTGSGGSITYFLQNIHTNKFTIDRHSGVLRIKPGVTLDYEKSRTHFVVVVAKDG 218

Query: 222 GNPPR 226
           G   R
Sbjct: 219 GGKLR 223


>gi|344242103|gb|EGV98206.1| Cadherin-23 [Cricetulus griseus]
          Length = 1866

 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 58/195 (29%), Positives = 90/195 (46%), Gaps = 20/195 (10%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWLSNDYGERFSIS-RQGDISLM 100
            F +  Y  +  E++ V  V+L VT           ++Y L +  G +F+I+   GDI ++
Sbjct: 914  FDQPSYQEAVFEDVAVGTVILRVTATDADSGNFALIEYSLGDGEG-KFAINPNTGDIYVL 972

Query: 101  QCLDYETEDSYRFTVYATDT-------LMTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
              LD E +D Y  T  A D            S  V I V++VND  P+F  PQ+   +  
Sbjct: 973  SSLDREKKDHYILTALAKDNPGDVASNRRENSVQVVIQVLDVNDCRPQFSKPQFSTSV-- 1030

Query: 154  IPLADLTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSIN-DSGHISIVDLSALNTS 210
                +   G+ +  + A D D+G   ++T SL GP  + F ++ DSG ++       +  
Sbjct: 1031 --YENEPAGTSVITMLATDQDEGSNGQLTYSLEGPGMEAFFVDMDSGLVT-TQRPLQSYE 1087

Query: 211  TIQLVVVATDTGNPP 225
               L VVATD G PP
Sbjct: 1088 RFNLTVVATDGGEPP 1102



 Score = 47.8 bits (112), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 57/211 (27%), Positives = 94/211 (44%), Gaps = 28/211 (13%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVT-TNKPRDL--RVKYWLSNDYGERFSISRQGDISLM- 100
           FS   Y+V  LEN P  + +L VT T++   L   + Y +     +RF I     +  + 
Sbjct: 581 FSPAAYTVHLLENCPPGFSVLQVTATDEDSGLNGELVYRIEAGAQDRFLIHPATGVIYVG 640

Query: 101 -QCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
              +D E ++SYR TV ATD     ++ +A + I + ++ND  P F  P   + +    L
Sbjct: 641 NATIDREEQESYRLTVVATDRGTVPLSGTAIITILIDDINDSRPEFLNPIQTVSV----L 696

Query: 157 ADLTPGSVIGKVEAADGDKGDRV------------TLSLRGPYEKMFSIN-DSGHISI-- 201
               PG+VI  V A D D   ++            T  L    E  F++N ++G + +  
Sbjct: 697 ESAEPGTVIANVTAIDLDLDPKLEYHIISIVAKDDTDCLVPDQEDAFAVNINTGSVMVKS 756

Query: 202 -VDLSALNTSTIQLVVVATDTGNPPRQASVP 231
            ++   + T  + L V+   +  P R  SVP
Sbjct: 757 PLNRELVATYEVTLSVIDNASDLPERSVSVP 787



 Score = 42.4 bits (98), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 38/122 (31%), Positives = 60/122 (49%), Gaps = 11/122 (9%)

Query: 92  SRQGDISLMQCLDYETEDSYRFTVYATDTLMTTSAT---VNISVVNVNDWDPRFRYPQYE 148
           S  G +   + +DYE      FTV A+D      A    V + +V++ND +P F  P Y+
Sbjct: 861 SSAGKVIANRTVDYEEVHWLNFTVRASDNGSPPRAAEIPVYLEIVDINDNNPIFDQPSYQ 920

Query: 149 LFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSIN-DSGHISIVDLSA 206
             +      D+  G+VI +V A D D G+   +    G  E  F+IN ++G I +  LS+
Sbjct: 921 EAV----FEDVAVGTVILRVTATDADSGNFALIEYSLGDGEGKFAINPNTGDIYV--LSS 974

Query: 207 LN 208
           L+
Sbjct: 975 LD 976


>gi|262263290|tpg|DAA06590.1| TPA_inf: protocadherin beta 13 [Anolis carolinensis]
          Length = 806

 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 52/153 (33%), Positives = 78/153 (50%), Gaps = 18/153 (11%)

Query: 92  SRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYP-QY 147
           S  G++  ++ LDYE    ++ TV ATD     +++ A V + V++ ND  P F YP Q 
Sbjct: 505 SETGNMYALRSLDYEQIKDFKITVRATDGGIPSLSSDAFVRVMVIDENDNPPFFLYPLQN 564

Query: 148 ELFLPHIPLADLTP-----GSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-DSGH 198
             F    P  +L P     G +I KV A DGD G    LS   L+     +FSI   +G 
Sbjct: 565 STF----PCNELLPKMAEGGYLITKVVAVDGDSGQNSWLSYEILKATDPGLFSIGAQNGE 620

Query: 199 ISIVD-LSALNTSTIQLVVVATDTGNPPRQASV 230
           +     L+  ++S  +LV+VA D G PP+ ++V
Sbjct: 621 VKTRRPLTERDSSKQRLVIVAKDNGVPPQTSTV 653



 Score = 42.0 bits (97), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 50/197 (25%), Positives = 81/197 (41%), Gaps = 23/197 (11%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTTNKPRDL------RVKYWLSNDYGERFSI----SR 93
            F+++EY V   EN P + +   VT  + RDL       +KY+      E   +      
Sbjct: 237 HFTQSEYKVRLKENSPRDTL---VTKVEARDLDFGSNAEIKYFFHRVPDEVLGLFHLNEM 293

Query: 94  QGDISLMQCLDYETEDSYRFTVYATD-TLMTTSATVNISVVNVNDWDPRFRYPQYELFLP 152
            GDI++   +DYE E SY  ++ ATD   ++      I V +VND  P       +  +P
Sbjct: 294 TGDITVFGEIDYEKETSYDMSIKATDGGGLSGHCKAFIEVEDVNDNAPEVSIISLKNIIP 353

Query: 153 HIPLADLTPGSVIGKVEAADGDKGDR----VTLSLRGPYEKMFSINDSGHISI-VDLSAL 207
                D    +V+      D D GD      ++ +  P+    + N+   + I   L   
Sbjct: 354 E----DSPLETVVALFSVTDEDSGDNGKTSCSVEMTLPFVLKATKNNFYQLVIQTPLDRE 409

Query: 208 NTSTIQLVVVATDTGNP 224
           N S   + + A D G+P
Sbjct: 410 NVSEYNVTITAIDRGSP 426



 Score = 42.0 bits (97), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 52/199 (26%), Positives = 90/199 (45%), Gaps = 25/199 (12%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVK----YWLSNDYGERFSISRQGDISL 99
           +FSK E+ +   EN+P N + L + + K  DL       Y LS +   R  +    D S+
Sbjct: 128 RFSKKEFDLEVPENVPRN-MKLPLESAKDEDLGKNTIQNYTLSPNEHFRLDVENNKDGSM 186

Query: 100 M------QCLDYETEDSYRFTVYATDTLM---TTSATVNISVVNVNDWDPRFRYPQYELF 150
                  + LD   +  +  T+ A D  +   T +  +NI V++ ND  P F   +Y++ 
Sbjct: 187 YVDLIVEKALDRGKDPFFGLTLTAVDGGIPQRTGTVKINIKVLDNNDNSPHFTQSEYKVR 246

Query: 151 LPHIPLADLTPGSVIGKVEAADGDKGDRVTLSL---RGPYE--KMFSIND-SGHISIV-D 203
           L      D    +++ KVEA D D G    +     R P E   +F +N+ +G I++  +
Sbjct: 247 LKENSPRD----TLVTKVEARDLDFGSNAEIKYFFHRVPDEVLGLFHLNEMTGDITVFGE 302

Query: 204 LSALNTSTIQLVVVATDTG 222
           +     ++  + + ATD G
Sbjct: 303 IDYEKETSYDMSIKATDGG 321


>gi|119582077|gb|EAW61673.1| FAT tumor suppressor homolog 2 (Drosophila) [Homo sapiens]
          Length = 4349

 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 52/193 (26%), Positives = 90/193 (46%), Gaps = 21/193 (10%)

Query: 43   LQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGER---FSISRQ-GDIS 98
            L F +  YS + +E  PVN+++  ++      L   +W +   G++   F I +  G I 
Sbjct: 1347 LAFDETYYSFTVMETDPVNHMVGVISVEGRPGL---FWFNISGGDKDMDFDIEKTTGSIV 1403

Query: 99   LMQCLDYETEDSYRFTVYATDTLMTTSATVNISVV-NVNDWDPRFRYPQYELFLPHIPLA 157
            + + LD     +Y  TV  TD   T +  V+I ++ N+N   P+F   +YE+ +P     
Sbjct: 1404 IARPLDTRRRSNYNLTVEVTDGSRTIATQVHIFMIANINHHRPQFLETRYEVRVPQ---- 1459

Query: 158  DLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSGHISIVDLSALNTSTIQLVVV 217
            D  PG  + +V+A D DKG  +  ++ G         D G  S+  L    +S + + V 
Sbjct: 1460 DTVPGVELLRVQAIDQDKGKSLIYTIHGS-------QDPGSASLFQLDP--SSGVLVTVG 1510

Query: 218  ATDTGNPPRQASV 230
              D G+ P Q ++
Sbjct: 1511 KLDLGSGPSQHTL 1523



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/142 (31%), Positives = 69/142 (48%), Gaps = 16/142 (11%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYG----ERFSI-SRQGD 96
            F  + Y     EN+PV   ++ VT    +  RD +V Y LS D G    E F+I S  G 
Sbjct: 2797 FEADPYKAVLTENMPVGTSVIQVTAIDKDTGRDGQVSYRLSADPGSNVHELFAIDSESGW 2856

Query: 97   ISLMQCLDYETEDSYRFTVYATD----TLMTTSATVNISVVNVNDWDPRFRYPQYELFLP 152
            I+ +Q LD ET  +Y F V A D      +++ A V +S+ + ND  PRF   +Y   + 
Sbjct: 2857 ITTLQELDCETCQTYHFHVVAYDHGQTIQLSSQALVQVSITDENDNAPRFASEEYRGSV- 2915

Query: 153  HIPLADLTPGSVIGKVEAADGD 174
               + +  PG ++  ++  D D
Sbjct: 2916 ---VENSEPGELVATLKTLDAD 2934



 Score = 55.5 bits (132), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 62/201 (30%), Positives = 86/201 (42%), Gaps = 20/201 (9%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTT------NKPRDLRVKYWLSNDYGERFSISRQGD- 96
            +F+  EY  S +EN     ++ T+ T       + R +   Y    D   +F IS+ GD 
Sbjct: 2905 RFASEEYRGSVVENSEPGELVATLKTLDADISEQNRQVTC-YITEGDPLGQFGISQVGDE 2963

Query: 97   --ISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHI 154
              IS  + LD E    Y   V A+D     S TV I V++VND  P+      +L     
Sbjct: 2964 WRISSRKTLDREHTAKYLLRVTASDGKFQASVTVEIFVLDVNDNSPQCS----QLLYTGK 3019

Query: 155  PLADLTPGSVIGKVEAA--DGDKGDRVTLSLRGPYEKMFSINDSGHISIVDLSALNTS-- 210
               D+ PG  I KV A   D D   ++T SL GP    F + D     +  L+AL+    
Sbjct: 3020 VHEDVFPGHFILKVSATDLDTDTNAQITYSLHGPGAHEFKL-DPHTGELTTLTALDRERK 3078

Query: 211  -TIQLVVVATDTGNPPRQASV 230
                LV  ATD G    QA +
Sbjct: 3079 DVFNLVAKATDGGGRSCQADI 3099



 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 59/228 (25%), Positives = 100/228 (43%), Gaps = 25/228 (10%)

Query: 28   LATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWL--S 82
            + T++V+    +    QF ++ YS   LEN  V  V+LTV+    + P +  + Y L   
Sbjct: 3304 VTTVMVNITDVNEHRPQFPQDPYSTRVLENALVGDVILTVSATDEDGPLNSDITYSLIGG 3363

Query: 83   NDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWD 139
            N  G      ++G++ + + LD E   SY   + ATD+    +     + I V +VND  
Sbjct: 3364 NQLGHFTIHPKKGELQVAKALDREQASSYSLKLRATDSGQPPLHEDTDIAIQVADVNDNP 3423

Query: 140  PRFRYPQYELFLPHIPLADLTP-GSVIGKVEAADGDKGD-------RVTLSLRGPYEKMF 191
            PRF    Y        + + +P GS + ++  +D D  +       R+T   +G     F
Sbjct: 3424 PRFFQLNYS-----TTVQENSPIGSKVLQLILSDPDSPENGPPYSFRIT---KGNNGSAF 3475

Query: 192  SINDSGHISIVD-LSALNTSTIQLVVVATDTGNPPRQASVPAIMHFPE 238
             +   G +   + LS       QL + A+D+G PP  +S    +H  E
Sbjct: 3476 RVTPDGWLVTAEGLSRRAQEWYQLQIQASDSGIPPLSSSTSVRVHVTE 3523



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 66/242 (27%), Positives = 104/242 (42%), Gaps = 21/242 (8%)

Query: 10   PITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTT 69
            P TL V+A    +   + LAT+I+    +      FSK+EY V   E++PV   +L V+ 
Sbjct: 1625 PHTLTVKAEDQGSPQWHDLATVIIHVYPSDRSAPIFSKSEYFVEIPESIPVGSPILLVSA 1684

Query: 70   NKPRDLRVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDTLMT-TSATV 128
              P ++  +    N  G     S  G IS  + LD+E   SY+  +  ++     T   V
Sbjct: 1685 MSPSEVTYELREGNKDGVFSMNSYSGLISTQKKLDHEKISSYQLKIRGSNMAGAFTDVMV 1744

Query: 129  NISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGK------VEAADGDKGDRVTLS 182
             + +++ ND  P F       F+  I  A      ++ K      + A+D DK     L 
Sbjct: 1745 VVDIIDENDNAPMFL---KSTFVGQISEAAPLYSMIMDKNNNPFVIHASDSDKEANSLLV 1801

Query: 183  ---LRGPYEKMFSINDS-GHISIV-DLSALNTSTIQLVVVATDTGNP----PRQASVPAI 233
               L     K F I+ S G ++IV ++   +  + Q  V   D G+P    PR A V  I
Sbjct: 1802 YKILEPEALKFFKIDPSMGTLTIVSEMDYESMPSFQFCVYVHDQGSPVLFAPRPAQV--I 1859

Query: 234  MH 235
            +H
Sbjct: 1860 IH 1861



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 49/143 (34%), Positives = 75/143 (52%), Gaps = 11/143 (7%)

Query: 95   GDISLMQCLDYETEDSYRFTVYATD----TLMTTSATVNISVVNVNDWDPRFRYPQYELF 150
            G +S  Q LD E +D +   V   D    +L +TS  V + +++VND  P F +  + + 
Sbjct: 1192 GLLSTAQQLDRENKDEHILEVTVLDNGEPSLKSTSRVV-VGILDVNDNPPIFSHKLFNVR 1250

Query: 151  LPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIN-DSGHISIVDLSAL 207
            LP   L+ ++PG V  ++ A+D D+G   RVT S+    E+ FSI+  +G +S       
Sbjct: 1251 LPER-LSPVSPGPVY-RLVASDLDEGLNGRVTYSIEDSDEEAFSIDLVTGVVSSSSTFTA 1308

Query: 208  NTSTIQLVVVATDTGNPPRQASV 230
                I L + ATD+G PP  ASV
Sbjct: 1309 GEYNI-LTIKATDSGQPPLSASV 1330



 Score = 45.8 bits (107), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 55/192 (28%), Positives = 84/192 (43%), Gaps = 15/192 (7%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGERFSIS--RQGDISLMQC 102
            F    Y V   EN+ +   +L      P  LR+ Y +  +       +  + G +++   
Sbjct: 2171 FQSPYYKVRVPENITLYTPILHTQARSPEGLRLIYNIVEEEPLMLFTTDFKTGVLTVTGP 2230

Query: 103  LDYETEDSYRFTVYATDTLMT--TSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLT 160
            LDYE++  + FTV ATDT +   + ATV + V +VND  P F    Y   +    L   T
Sbjct: 2231 LDYESKTKHVFTVRATDTALGSFSEATVEVLVEDVNDNPPTFSQLVYTTSISE-GLPAQT 2289

Query: 161  PGSVIGKVEAADGDKGDRVTLSLR-----GPYEKMFSINDS-GHISIV-DLSALNTSTIQ 213
            P   + ++ A+D D G    +S +         K F IN S G +S V +L         
Sbjct: 2290 P---VIQLLASDQDSGRNRDVSYQIVEDGSDVSKFFQINGSTGEMSTVQELDYEAQQHFH 2346

Query: 214  LVVVATDTGNPP 225
            + V A D G+PP
Sbjct: 2347 VKVRAMDKGDPP 2358



 Score = 42.0 bits (97), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 43/154 (27%), Positives = 71/154 (46%), Gaps = 15/154 (9%)

Query: 51  SVSALENLPVNYVLLTVTTNKPR---DLRVKYWLSNDYGER-FSISRQ-GDISLMQCLDY 105
           S+  LE++P+N  L  +    P    + ++ Y +++   E  F I  + G +++   LDY
Sbjct: 721 SIDVLESVPINTPLARLAATDPDAGFNGKLVYVIADGNEEGCFDIELETGLLTVAAPLDY 780

Query: 106 ETEDSYRFTVYATDTLMTTSATVNISVVNVNDWD---PRFRYPQYELFLPHIPLADLTPG 162
           E  + Y   V   D      ++  +  VNV DW+   PRF    Y+L +      D   G
Sbjct: 781 EATNFYILNVTVYDLGTPQKSSWKLLTVNVKDWNDNAPRFPPGGYQLTISE----DTEVG 836

Query: 163 SVIGKVEAADGDKGD--RVTLSLRGPYEKMFSIN 194
           + I ++   D D  D  RV  +L  P EK FS++
Sbjct: 837 TTIAELTTKDADSEDNGRVRYTLLSPTEK-FSLH 869



 Score = 41.6 bits (96), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 63/229 (27%), Positives = 99/229 (43%), Gaps = 18/229 (7%)

Query: 10   PITLVVRAIQYDNQDRYA-LATLIVSKAGTSLRELQFSKNEYSVSALENLPVN-YVLLTV 67
            P+ L VRA         + L T+ VS  G       F   E+SV   E+ P    VL   
Sbjct: 3182 PLELTVRASDLGTPIPLSTLGTVTVSVVGLEDYLPVFLNTEHSVQVPEDAPPGTEVLQLA 3241

Query: 68   TTNKPRDLRVKYWL--SNDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDTLMTT 124
            T  +P   +  Y +   N+ G RF + +R G + +   LD+ET   Y  ++  +    ++
Sbjct: 3242 TLTRPGAEKTGYRVVSGNEQG-RFRLDARTGILYVNASLDFETSPKYFLSIECSRKSSSS 3300

Query: 125  S---ATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDK--GDRV 179
                 TV +++ +VN+  P+F    Y   +    L +   G VI  V A D D      +
Sbjct: 3301 LSDVTTVMVNITDVNEHRPQFPQDPYSTRV----LENALVGDVILTVSATDEDGPLNSDI 3356

Query: 180  TLSLRGPYE-KMFSIN-DSGHISIVD-LSALNTSTIQLVVVATDTGNPP 225
            T SL G  +   F+I+   G + +   L     S+  L + ATD+G PP
Sbjct: 3357 TYSLIGGNQLGHFTIHPKKGELQVAKALDREQASSYSLKLRATDSGQPP 3405



 Score = 41.2 bits (95), Expect = 0.86,   Method: Compositional matrix adjust.
 Identities = 39/133 (29%), Positives = 68/133 (51%), Gaps = 14/133 (10%)

Query: 95   GDISLMQCLDYETEDSYRFTVYATDT-----LMTTSATVNISVVNVNDWDPRFRYPQYEL 149
            G ++++  +DYE+  S++F VY  D           A V I V +VND  PRF    YE+
Sbjct: 1820 GTLTIVSEMDYESMPSFQFCVYVHDQGSPVLFAPRPAQVIIHVRDVNDSPPRFSEQIYEV 1879

Query: 150  FLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSIND-SGHISIVDLSAL 207
             +    +  + PG  +  V A+D D    V  S++ G  ++  +I+  +G IS+++ + L
Sbjct: 1880 AI----VGPIHPGMELLMVRASDEDS--EVNYSIKTGNADEAVTIHPVTGSISVLNPAFL 1933

Query: 208  NTSTIQLVVVATD 220
              S  +L + A+D
Sbjct: 1934 GLSR-KLTIRASD 1945



 Score = 40.0 bits (92), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 58/202 (28%), Positives = 84/202 (41%), Gaps = 24/202 (11%)

Query: 41   RELQFSKNEYSVSALENLPVN--YVLLTVTTNKPRDLRVKYWLSNDYGERFSISRQGDIS 98
            + LQF ++ Y  +  ENL      V+L    N   D  + Y+L N       +   G + 
Sbjct: 1964 KSLQFDQDVYWAAVKENLQDRKALVILGAQGNHLNDT-LSYFLLNGTDMFHMVQSAGVLQ 2022

Query: 99   LMQ-CLDYETEDSYRFTVYATDTLM---TTSATVNISVVNVNDWDPRFRY-PQYELFLPH 153
                  D E +D++   V   D           V +S+ +VND  P+F++ P Y +    
Sbjct: 2023 TRGVAFDREQQDTHELAVEVRDNRTPQRVAQGLVRVSIEDVNDNPPKFKHLPYYTI---- 2078

Query: 154  IPLADLT-PGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDS-GHISI---VDLSA 206
              + D T PG V+ +V A D D G    VT      Y   F I+   G IS+    D  A
Sbjct: 2079 --IQDGTEPGDVLFQVSATDEDLGTNGAVTYEFAEDY-TYFRIDPYLGDISLKKPFDYQA 2135

Query: 207  LNTSTIQLVVVATDTGNPPRQA 228
            LN     L V+A D G P  Q+
Sbjct: 2136 LN--KYHLKVIARDGGTPSLQS 2155



 Score = 38.1 bits (87), Expect = 6.9,   Method: Compositional matrix adjust.
 Identities = 55/197 (27%), Positives = 89/197 (45%), Gaps = 23/197 (11%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTTNKPRD------LRVKYWLSNDYGERFSISRQ-GD 96
            +FS+  Y+ SA E+LP    +  V     +D      +R     SN  G  FS+    G 
Sbjct: 2690 KFSEPLYTFSAPEDLPEGSEIGIVKAVAAQDPVIYSLVRGTTPESNKDG-VFSLDPDTGV 2748

Query: 97   ISLMQCLDYETEDSYRFTVYA---TDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
            I + + +D+E+   Y+  V A    +T + +  +VNI V +VND  P F    Y+  L  
Sbjct: 2749 IKVRKPMDHESTKLYQIDVMAHCLQNTDVVSLVSVNIQVGDVNDNRPVFEADPYKAVL-- 2806

Query: 154  IPLADLTPGSVIGKVEAADGDKGDRVTLSLR------GPYEKMFSIN-DSGHISIV-DLS 205
                ++  G+ + +V A D D G    +S R          ++F+I+ +SG I+ + +L 
Sbjct: 2807 --TENMPVGTSVIQVTAIDKDTGRDGQVSYRLSADPGSNVHELFAIDSESGWITTLQELD 2864

Query: 206  ALNTSTIQLVVVATDTG 222
                 T    VVA D G
Sbjct: 2865 CETCQTYHFHVVAYDHG 2881


>gi|41223221|emb|CAD92412.1| protocadherin [Homo sapiens]
          Length = 831

 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 76/274 (27%), Positives = 120/274 (43%), Gaps = 40/274 (14%)

Query: 45  FSKNEYSVSALENLPVNYV--LLTVTTNKPRDLRVKYWLSNDYGERFSISRQ-GDISLMQ 101
           F+ NEY+    ENLP +    L+TVT     D         D  + F+I  Q G I    
Sbjct: 390 FTHNEYNFYVPENLPRHGTVGLITVTDPDYGDNSAVTLSILDENDDFTIDSQTGVIRPNI 449

Query: 102 CLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYP----QYELFLPHI 154
             D E ++SY F V A D      ++SA V I+VV+VND  P F  P     YEL LP  
Sbjct: 450 SFDREKQESYTFYVKAEDGGRVSRSSSAKVTINVVDVNDNKPVFIVPPSNCSYELVLPST 509

Query: 155 PLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-DSGHISIVDLSALNTS 210
                 PG+V+ +V A D D G    +    + G    +F+I+ ++G+I++++   +   
Sbjct: 510 -----NPGTVVFQVIAVDNDTGMNAEVRYSIVGGNTRDLFAIDQETGNITLMEKCDVTDL 564

Query: 211 TIQLVVV-ATDTGNPPRQASVPAIMHFPEAIVQQAS--------------------SKLN 249
            +  V+V A D G P    SV  +  F    V  A+                    + ++
Sbjct: 565 GLHRVLVKANDLGQPDSLFSVVIVNLFVNESVTNATLINELVRKSTEAPVTPNTEIADVS 624

Query: 250 SGTSSTVLIILGVVLIVLGFVIILLILYIHKNKH 283
           S TS  V I++  V   +  V+++ I  + + + 
Sbjct: 625 SPTSDYVKILVAAVAGTITVVVVIFITAVVRCRQ 658



 Score = 57.8 bits (138), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 37/114 (32%), Positives = 61/114 (53%), Gaps = 10/114 (8%)

Query: 76  RVKYWLSNDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNIS 131
           ++ Y L  D    FS+  R G +++++ LD E ED Y FT+ A D     +T++ TV +S
Sbjct: 320 KINYLLGPDAPPEFSLDCRTGMLTVVKKLDREKEDKYLFTILAKDNGVPPLTSNVTVFVS 379

Query: 132 VVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDR--VTLSL 183
           +++ ND  P F + +Y  ++P     +L     +G +   D D GD   VTLS+
Sbjct: 380 IIDQNDNSPVFTHNEYNFYVPE----NLPRHGTVGLITVTDPDYGDNSAVTLSI 429



 Score = 37.7 bits (86), Expect = 9.1,   Method: Compositional matrix adjust.
 Identities = 36/139 (25%), Positives = 67/139 (48%), Gaps = 15/139 (10%)

Query: 103 LDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADL 159
           LD E +D+Y   V   D      +++A + +SV + ND  P F+  + E+ +P     + 
Sbjct: 27  LDREEKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVFKETEIEVSIPE----NA 82

Query: 160 TPGSVIGKVEAADGDKGDRVTLS------LRGPYEKMFSIN-DSGHISIVD-LSALNTST 211
             G+ + ++ A D D G+   +       +     ++F +N  +G I+I + L    T  
Sbjct: 83  PVGTSVTQLHATDADIGENAKIHFSFSNLVSNIARRLFHLNATTGLITIKEPLDREETPN 142

Query: 212 IQLVVVATDTGNPPRQASV 230
            +L+V+A+D G  P +A V
Sbjct: 143 HKLLVLASDGGLMPARAMV 161


>gi|344275031|ref|XP_003409317.1| PREDICTED: protocadherin-15 isoform 11 [Loxodonta africana]
          Length = 1915

 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 67/242 (27%), Positives = 112/242 (46%), Gaps = 29/242 (11%)

Query: 6   DFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVL- 64
           DF Q   LV++A Q +     A A+L +     + +   F+   Y    LE+ PV   + 
Sbjct: 334 DFHQKFDLVIKAEQDNGHPLPAFASLHIEILDENNQSPYFTMPAYQGYILESAPVGSTIS 393

Query: 65  --LTVTT-----------NKPRDLRVKYWLSNDYGERFSISRQG---DISLMQCLDYETE 108
             L +TT              +D  V  +L NDY   F++++ G    ++L+Q +D E +
Sbjct: 394 DSLNLTTPLRIIVLDKDVEDTKDPEVHLFL-NDYTSVFTVTQTGITRYLTLLQPVDREEQ 452

Query: 109 DSYRFTVYATDTLMTTSAT-VNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGK 167
            +Y F++ A D +  +    VNI V++ ND  P F    YE+++      D++PG  + +
Sbjct: 453 QTYTFSITAFDGVQESEPVIVNIQVMDANDNTPTFPEISYEVYV----YTDMSPGDSVIQ 508

Query: 168 VEAADGDKGD--RVTLSLRGPYEKMFSIND-SGHISIV-DLSALNTSTIQLVVVATDTGN 223
           + A D D+G    +T  +    +  F IN  +G I+I   +  +   T  L V A D  N
Sbjct: 509 LTAVDADEGSNGEITYEILVGDQGDFIINKTTGLITIAPGVELIVGRTYALTVQAAD--N 566

Query: 224 PP 225
           PP
Sbjct: 567 PP 568



 Score = 48.9 bits (115), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 70/233 (30%), Positives = 102/233 (43%), Gaps = 26/233 (11%)

Query: 13  LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKP 72
           LVV A       R++  TL +           F+ + Y+V   ENLP     L +   K 
Sbjct: 765 LVVVATDGAVHPRHSTLTLAIKVLDIDDNSPVFTNSTYTVVVEENLPAGTTFLKIEA-KD 823

Query: 73  RDL--RVKYWLSNDYGERFSISR--QGDISLMQCLDYET----EDSYRFTVYATD---TL 121
            DL   V Y + +   + F       G++SL++ LDYE     E +  F V A D   T+
Sbjct: 824 VDLGANVSYRIRSPEVKHFFALHPFTGELSLLRSLDYEAFPEQEATITFLVEAFDIYGTM 883

Query: 122 MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDK----GD 177
               ATV + V ++ND+ P F    Y+  +      D   G+ I  V A D D       
Sbjct: 884 PPGIATVTVIVKDMNDYPPVFNKRIYKGMV----APDAVKGTPITTVYAEDADPPGLPAS 939

Query: 178 RVTL---SLRGPY-EKMFSI-NDSGH-ISIVDLSALNTSTIQLVVVATDTGNP 224
           RV      ++ PY   +F +  DSG  I+ V+L+   T+  +LVVVA D G P
Sbjct: 940 RVRYRVDDVQFPYPASIFDVVEDSGLVITRVNLNEEPTTIFKLVVVAFDDGEP 992



 Score = 46.6 bits (109), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 53/193 (27%), Positives = 94/193 (48%), Gaps = 10/193 (5%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGER-FSISRQ-GDISLMQ 101
           +F +  YS+   E + +  VLL +         + Y + N   +R F++S   G ++L +
Sbjct: 593 RFPQLMYSLEISEAMRIGAVLLNLQATDREGDPITYAIENGDPQRVFNLSENTGILTLGK 652

Query: 102 CLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLP-HIPLADLT 160
            LD E+ D Y   V A+D     ++T  ++VV  +        P ++ +LP ++ + +  
Sbjct: 653 ALDRESTDRYILIVTASDGRPDGTSTATVNVVVTDV---NDNAPVFDPYLPRNLSVVEEE 709

Query: 161 PGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDSGHI-SIVDLSALNTSTIQLVVV 217
             + +G+V A D D G   +V  SL G +  +F I  +G I + V L+       +LVVV
Sbjct: 710 ANAFVGQVRATDPDAGINGQVHYSL-GNFNNLFRITSNGSIYTAVKLNREVRDYYELVVV 768

Query: 218 ATDTGNPPRQASV 230
           ATD    PR +++
Sbjct: 769 ATDGAVHPRHSTL 781



 Score = 45.8 bits (107), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 50/171 (29%), Positives = 80/171 (46%), Gaps = 17/171 (9%)

Query: 76  RVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDTLMT---TSATVNISV 132
           +V Y L N +   F I+  G I     L+ E  D Y   V ATD  +    ++ T+ I V
Sbjct: 729 QVHYSLGN-FNNLFRITSNGSIYTAVKLNREVRDYYELVVVATDGAVHPRHSTLTLAIKV 787

Query: 133 VNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEK-MF 191
           ++++D  P F    Y + +      +L  G+   K+EA D D G  V+  +R P  K  F
Sbjct: 788 LDIDDNSPVFTNSTYTVVVEE----NLPAGTTFLKIEAKDVDLGANVSYRIRSPEVKHFF 843

Query: 192 SIND-SGHISI---VDLSAL--NTSTIQLVVVATDTGN--PPRQASVPAIM 234
           +++  +G +S+   +D  A     +TI  +V A D     PP  A+V  I+
Sbjct: 844 ALHPFTGELSLLRSLDYEAFPEQEATITFLVEAFDIYGTMPPGIATVTVIV 894


>gi|334331227|ref|XP_003341469.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 1-like [Monodelphis
            domestica]
          Length = 4550

 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 46/145 (31%), Positives = 69/145 (47%), Gaps = 8/145 (5%)

Query: 90   SISRQGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYEL 149
            +I  +  + + + LD E  DSY  T+ ATD   ++ A V + V++ ND  P      Y  
Sbjct: 2934 NIQNEWKVYVKKPLDREKRDSYLLTITATDGAFSSKAIVEVKVLDANDNSPICEKSAYSD 2993

Query: 150  FLPHIPLADLTPGSVIGKVEAADGD--KGDRVTLSLRGPYEKMFSIN-DSGHI-SIVDLS 205
             +P     D  PG +I +V A D D      +T +L GP  + F IN D+G + ++  L 
Sbjct: 2994 TIPE----DTVPGKLIMQVSAIDADIRSNAEITYTLSGPGAEKFKINADTGELKTLAPLD 3049

Query: 206  ALNTSTIQLVVVATDTGNPPRQASV 230
                +   L+V ATD G    Q SV
Sbjct: 3050 REQQAVYNLLVQATDGGGRFCQMSV 3074



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 59/201 (29%), Positives = 98/201 (48%), Gaps = 18/201 (8%)

Query: 45   FSKNEYSVSALENLPVNYVLLTV-TTNKPRDL--RVKYWLSNDYG-ERFSISRQGDISLM 100
            F +NEY V   EN P+  +++ V  T++   +  ++ Y + ND+  +RF  + +G I   
Sbjct: 2455 FMQNEYEVELAENAPLQTLVVEVKATDEDSGIYGQITYHIVNDFAKDRFYTNERGQIFTS 2514

Query: 101  QCLDYETEDSYRFTV--YATDTLMTTS-ATVNISVVNVNDWDPRFRYPQYELFLPHIPLA 157
            + LD ET      T+   A DT    +  TVN+ + + ND  P+FR  +Y + +     +
Sbjct: 2515 EKLDRETAGEKVITIRLMAKDTGGKVAFCTVNVILTDDNDNAPQFRATKYRVNIG----S 2570

Query: 158  DLTPGSVIGKVEAADGDKGDR--VTLSLRGPYEKM---FSIND-SGHISIVD-LSALNTS 210
            D   G+ + KV A+D D+G    +T S+    E +     IN   G I+  + L  L   
Sbjct: 2571 DAPKGTSVIKVLASDADEGSNADITYSIEADSESVQENLEINRLFGIITTKESLIGLENE 2630

Query: 211  TIQLVVVATDTGNPPRQASVP 231
                 V A D G+PP+++ VP
Sbjct: 2631 VFTFFVRAVDGGSPPKESVVP 2651



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 59/203 (29%), Positives = 95/203 (46%), Gaps = 16/203 (7%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKY-WLSNDYGERFSIS-RQGDISLMQC 102
            F K  YS    EN+ ++  ++ V  N P  L+V Y  +  D   +F+I    G I+++  
Sbjct: 2144 FEKAFYSAEIPENIQLHSPVVHVQANSPEGLKVFYSIMDGDPFNQFTIHFNTGVINVIAP 2203

Query: 103  LDYETEDSYRFTVYATDTLMTTSATVNISVV--NVNDWDPRFRYPQYELFLPHIPLADLT 160
            LD+E+  +Y+ ++ ATD+L    A V + ++  +VND  P F    Y   L    +    
Sbjct: 2204 LDFESHPAYKLSIRATDSLTGVHAEVFVDIIVEDVNDNPPVFTQQSYVTTLSEATVM--- 2260

Query: 161  PGSVIGKVEAADGDKGDR--VTLSLRGPYEK----MFSIN-DSGHISIVD-LSALNTSTI 212
             G+ +  V A D D      ++  L G + K     F I+  SG IS+V  L    T   
Sbjct: 2261 -GTSVVHVWATDTDSAPNRGISYHLFGNHSKSPDQYFHIDSSSGLISLVRTLDYEETQRH 2319

Query: 213  QLVVVATDTGNPPRQASVPAIMH 235
            +L+V A D+G PP  +     +H
Sbjct: 2320 ELLVRAVDSGMPPLSSDAIVTVH 2342



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 62/215 (28%), Positives = 99/215 (46%), Gaps = 21/215 (9%)

Query: 27   ALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLS---- 82
            A  T++VS    +     F   EY  +  E++ V   +L V     RD+     ++    
Sbjct: 3175 ATGTVVVSVLDINDNPPVFEYREYGATVPEDVLVGTEVLQVYAAS-RDIEANAEITYAII 3233

Query: 83   --NDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVN 136
              N++G +FSI +  G I ++  LDYE+   Y  TV ATD     ++  ATVN++V ++N
Sbjct: 3234 SGNEHG-KFSIDATTGAIFIIDHLDYESSHDYYLTVEATDGGTPSLSDVATVNVNVTDIN 3292

Query: 137  DWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS-LRGPYEKMFSIND 195
            D  P F    Y   +    + + +  +V+   + ADG     +  S + G     F+I+ 
Sbjct: 3293 DNTPVFSQDMYTAVISEDAILEQSIVTVMA--DDADGPSNSHIHYSIIDGNQGNPFTIDP 3350

Query: 196  -SGHISIVDLSALNTSTIQ---LVVVATDTGNPPR 226
              G I +  L  L+  TI    L V A D G+PPR
Sbjct: 3351 VRGEIKVTQL--LDRETISGYTLTVQAADNGSPPR 3383



 Score = 48.9 bits (115), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 48/142 (33%), Positives = 67/142 (47%), Gaps = 22/142 (15%)

Query: 48   NEYSVSALENLPVNYVLLTVTTNKPRDL------RVKYWL----SNDYGERFSISRQ-GD 96
            N Y    +ENLP    ++ V   K  DL      +V Y L    S D  E F+I  + G 
Sbjct: 2775 NPYEAFIVENLPGGSRVIQV---KATDLDSGANGQVLYSLDQSQSLDVIESFAIDMETGW 2831

Query: 97   ISLMQCLDYETEDSYRFTVYATD----TLMTTSATVNISVVNVNDWDPRFRYPQYELFLP 152
            I+ ++ LD+E  D Y  TV A+D      ++++A V ISV +VND  PRF    Y+  + 
Sbjct: 2832 ITTLKELDHEKRDKYHITVVASDYGEKVQLSSTAVVEISVTDVNDNPPRFTAEIYKGTVS 2891

Query: 153  HIPLADLTPGSVIGKVEAADGD 174
                 D  PG VI  +   D D
Sbjct: 2892 E----DDPPGGVIAILSTTDAD 2909



 Score = 48.5 bits (114), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 46/179 (25%), Positives = 88/179 (49%), Gaps = 25/179 (13%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLS------NDYGERFSISRQ-GD 96
            +FS+  Y+ +  E+LP+   + T+  +  +   V Y L+      ++ GE F I +  G 
Sbjct: 2665 KFSEPFYTYTVSEDLPIGSEIDTIRVDHSQP--VSYSLTKGNTPESNGGESFVIDKHSGK 2722

Query: 97   ISLMQCLDYETEDSYRFTVYAT----DTLMTTSATVNISVVNVNDWDPRFRYPQYELFLP 152
            + L + LD+ET   Y+F+V A     D+ + +   ++I V +VND  P      YE F+ 
Sbjct: 2723 LKLEKNLDHETTKWYQFSVIAQSTHEDSEVVSFVDISIQVKDVNDNSPVLESNPYEAFI- 2781

Query: 153  HIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSGHISIVDLSALNTST 211
               + +L  GS + +V+A D D G    +        ++S++ S  + +++  A++  T
Sbjct: 2782 ---VENLPGGSRVIQVKATDLDSGANGQV--------LYSLDQSQSLDVIESFAIDMET 2829



 Score = 47.8 bits (112), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 63/234 (26%), Positives = 101/234 (43%), Gaps = 22/234 (9%)

Query: 8   LQPI-TLVVRAIQYD--NQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVL 64
           L+PI T     +++D    DR A   ++V   G +    +F++  Y  S  EN+P+   +
Sbjct: 424 LEPIRTQQASHLEFDVTTSDRKASTKVLVKVLGANSNPPEFTQTSYRASFDENVPIGTSI 483

Query: 65  LTVTTNKPRDLR---VKYWLSNDYGERFSISR-QGDISLMQCLDYE-TEDSYRFTVYATD 119
           ++V+   P +     V Y ++N     F I+   G +S  + LDYE     Y   + A+D
Sbjct: 484 MSVSAIDPDEGENGYVTYSIANLNHVPFVINHFTGAVSTSEHLDYELMPRVYTLRIRASD 543

Query: 120 TLM----TTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDK 175
             +       A V +++ N+ND  P F     E  +P     DL  G  I  V A D D+
Sbjct: 544 WGLPYRREVEALVTLTLNNLNDNTPLFEKINCEGTIPR----DLGVGEQITTVSAIDADE 599

Query: 176 GDRVTLSLRGPYE-KMFSINDSGHI-----SIVDLSALNTSTIQLVVVATDTGN 223
              V   +    E  +FS+N S  +     S+V+      S   L + ATD  N
Sbjct: 600 LQLVRYQIEAGNELDLFSLNPSSGVLSLKHSLVEGLGAKVSFHSLRITATDGEN 653



 Score = 46.6 bits (109), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 42/132 (31%), Positives = 60/132 (45%), Gaps = 20/132 (15%)

Query: 92   SRQGDISLMQCLDYETEDSYRFTVYATDTLM---TTSATVNISVVNVNDWDPRFRYPQYE 148
            S  G ISL++ LDYE    +   V A D+ M   ++ A V + V ++ND  P F  P YE
Sbjct: 2300 SSSGLISLVRTLDYEETQRHELLVRAVDSGMPPLSSDAIVTVHVTDLNDNPPLFDQPLYE 2359

Query: 149  LFL----PHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSINDSGHISI 201
              +    PH        G  +  V+A D D  D   L    L G  +K F+I+      I
Sbjct: 2360 AKISEQAPH--------GHFVTCVKAYDADSSDTDKLEYSILSGNEQKNFAID--SKTGI 2409

Query: 202  VDLSALNTSTIQ 213
            + LS L   T++
Sbjct: 2410 ITLSNLRRQTLK 2421



 Score = 45.4 bits (106), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 53/191 (27%), Positives = 88/191 (46%), Gaps = 30/191 (15%)

Query: 56   ENLPVNYVLLTVTTNKP---RDLRVKYWLSNDYG-ERFSISRQ-GDISLMQCLDYETEDS 110
            E++PV   ++TV+ +     RD  ++Y + +  G   F I  + G I   + LD ET   
Sbjct: 1043 EDVPVGTSVMTVSAHDEDTGRDGEIRYSIRDGSGVGVFKIDEEKGVIETAEKLDRETVSH 1102

Query: 111  YRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSV-IG 166
            Y  TV+ATD     +++   + I + +VND  P+   P   ++ P +   + +P  V + 
Sbjct: 1103 YWLTVFATDQGVVPLSSFTEIYIEIEDVNDNAPQTSEP---VYYPEV--MENSPKDVSVV 1157

Query: 167  KVEAADGDKGDRVTLSLRGPYEKMFSINDSGHISIVDLSALNTSTIQ-----------LV 215
            ++EA D D      L+      K+ S N  G  +I   + L T+T +           L 
Sbjct: 1158 QIEAFDPDSSSSDKLTY-----KITSGNPQGFFAIHPKTGLITTTSRKLDREQQDEHILE 1212

Query: 216  VVATDTGNPPR 226
            V  TD GNPP+
Sbjct: 1213 VTVTDNGNPPK 1223



 Score = 43.1 bits (100), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 48/197 (24%), Positives = 87/197 (44%), Gaps = 18/197 (9%)

Query: 12   TLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNY-VLLTVTTN 70
            TL V+A    +  R+   T+ +  +  +     FSK  YS+   EN PV   VL  + T+
Sbjct: 3370 TLTVQAADNGSPPRFNTTTVNIDVSDVNDNAPVFSKGNYSIIIQENKPVGVSVLQLMVTD 3429

Query: 71   K-------PRDLRVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDT--- 120
            K       P    +   +S +  + F +++ G +     +  + +D Y   V   D    
Sbjct: 3430 KDSSHNGPPFSFSI---MSGNEEKAFEVNQDGVLITSTAIKRKVKDHYFLHVKVADNGKP 3486

Query: 121  LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVT 180
             +++ A ++I V+  + + P       E+F+      +   G VIGK+ A D D  D +T
Sbjct: 3487 QLSSLAYIDIRVIEESIYPPAIL--PLEIFI--TTFGEEYSGGVIGKIHATDQDVYDTLT 3542

Query: 181  LSLRGPYEKMFSINDSG 197
             SL    + +FS++ +G
Sbjct: 3543 YSLDPKMDSLFSVSSTG 3559



 Score = 38.9 bits (89), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 56/205 (27%), Positives = 88/205 (42%), Gaps = 36/205 (17%)

Query: 44   QFSKNEYSVSALEN-LPVNYVLLTVTTNKPRDLRVKYWLSNDYG----ERFSIS-RQGDI 97
            QFS ++Y V   E+ +P   +L    T+K    ++ Y L +        +F +    G +
Sbjct: 1417 QFSMSKYEVLIPEDTMPDTEILQISATDKDEKNKLIYTLQSSTDPLSLXKFRLDPATGSL 1476

Query: 98   SLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHI 154
               + LD+E    +  TV   D    +  + A V ++V + ND  P F    Y+  +   
Sbjct: 1477 YTAEKLDHEAVHQHVLTVMVRDQDVPVKRSFARVIVNVSDTNDHAPWFTSSSYQGRV--- 1533

Query: 155  PLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSGHI-----------SIVD 203
                   GSV+ +V A D DKG+          E ++SI +SG+I           SI  
Sbjct: 1534 -YESAAVGSVVLQVTALDKDKGENA--------EVLYSI-ESGNIGNSFTIDPILGSIKT 1583

Query: 204  LSALNTST---IQLVVVATDTGNPP 225
               L+ S+     L+V ATD GNPP
Sbjct: 1584 AKELDRSSQGEYDLMVKATDKGNPP 1608


>gi|109107523|ref|XP_001100797.1| PREDICTED: protocadherin-16-like [Macaca mulatta]
          Length = 3386

 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 58/197 (29%), Positives = 86/197 (43%), Gaps = 12/197 (6%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKP---RDLRVKYWLSNDYGERFSIS-RQGDISLM 100
            F    YSV   E++P   +LL +  + P    + RV Y+L       F +    G++   
Sbjct: 1943 FPVPAYSVEVPEDVPAGTLLLQLQAHDPDAGANGRVTYYLGAGTAGAFLLEPSSGELRTA 2002

Query: 101  QCLDYETEDSYRFTVYATDTL----MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
              LD E   SY F V A D      ++T+ +V I+V +VND  P F      L LP    
Sbjct: 2003 AALDREQCPSYTFAVSAVDGAAAGPLSTTVSVTITVRDVNDHAPTFPTSPLRLRLPRPGP 2062

Query: 157  ADLTPGSVIGKVEAADGDKGDRVTL--SLRGPYEKMFSIND-SGHISIVDLS-ALNTSTI 212
            +  TP   +  + A D D G   ++   L G      +++  +G I +     AL T   
Sbjct: 2063 SFSTPTLALATLRAEDRDAGANASILYRLAGTPPPGTTVDSYTGEIRVARSPVALGTRDR 2122

Query: 213  QLVVVATDTGNPPRQAS 229
             L +VATD G P R A+
Sbjct: 2123 VLFIVATDLGRPARSAT 2139



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 71/252 (28%), Positives = 122/252 (48%), Gaps = 37/252 (14%)

Query: 14   VVRAIQYDNQDRYALATLIVS--------KAGTS-LRELQFSKNEYS---------VSAL 55
            V  A+  + Q+ Y L  + VS        + GT+ +R    ++NE+S         ++  
Sbjct: 1144 VRAALDREAQELYILKVMAVSGSKAELGQQTGTATVRVSILNQNEHSPRLSEDPTFLAVA 1203

Query: 56   ENLP----VNYVLLTVTTNKPRDLRVKYWLS--NDYGERFSISRQ-GDISLMQCLDYETE 108
            EN P    V  V  T   + P   R+ Y L   ++  + F I  Q G+++ +Q LD E +
Sbjct: 1204 ENQPPGTNVGRVFATDRDSGPNG-RLTYSLQQLSEDSKAFRIHPQTGEVTTLQTLDREQQ 1262

Query: 109  DSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELF--LPHIPLAD-LTPG 162
             +Y+  V   D      +T+ TV+++V+++ND  P F          LP I + D + PG
Sbjct: 1263 STYQLLVQVQDGGSPSHSTTGTVHVAVLDLNDNSPTFLQASGAAAGGLP-IQVPDRVPPG 1321

Query: 163  SVIGKVEAADGDKGDRVTL--SLRGPYEKMFSIN-DSGH-ISIVDLSALNTSTIQLVVVA 218
            +++  ++A D D+G+  T+  +L GP  ++FS+N  SG  ++   L         L + A
Sbjct: 1322 TLVTTLQAKDPDEGENGTILYTLTGPGSELFSLNPHSGELLTAAPLIRAERPHYVLTLSA 1381

Query: 219  TDTGNPPRQASV 230
             D G+PPR AS+
Sbjct: 1382 HDQGSPPRSASL 1393



 Score = 55.1 bits (131), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 60/191 (31%), Positives = 92/191 (48%), Gaps = 21/191 (10%)

Query: 56  ENLPVNYVLLTVTTNKPRDLRVKYW-LSNDYGE-RFSISRQGDISLMQC----LDYETED 109
           E  P   ++  ++ + P D    +  +S + GE  F++S Q  +  + C    LD E  D
Sbjct: 465 EAAPPGQLVARISVSDPDDGDFAHVNVSLEGGEGHFALSTQDSVIYLVCVARRLDREERD 524

Query: 110 SYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLT-PGSVI 165
           +Y   V ATD+    +   A   + V +VND  P F     + + P  PL ++  PGS +
Sbjct: 525 AYNLRVTATDSGSPPLRAEAAFVLHVTDVNDNAPAF---DRQFYQPE-PLPEVALPGSFV 580

Query: 166 GKVEAADGDKG--DRVTLSLR-GPYEKMFSINDSGHISIVDLSALN---TSTIQLVVVAT 219
            +V A D D+G   +VT SL  G +   FSI+ +  I I   ++L+       QL VVAT
Sbjct: 581 VRVTARDPDQGTNGQVTYSLAPGAHTHWFSIDPTSGI-ITTAASLDYELEPQPQLTVVAT 639

Query: 220 DTGNPPRQASV 230
           D G PP  +S 
Sbjct: 640 DGGLPPLASSA 650



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 49/149 (32%), Positives = 69/149 (46%), Gaps = 15/149 (10%)

Query: 89   FSISR-QGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQY 147
            FS+ R  G +SL   LD+E  D Y+  + A D      A + + V +VND  P F    Y
Sbjct: 2410 FSVGRYGGRVSLTGPLDFEQCDRYQLQLLAHDGPHEGRANLTVLVEDVNDNAPAFSQSLY 2469

Query: 148  E-LFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSI--NDSGHISIV 202
            + + L H P     PGS I  V A D D G    ++  L  P +  FS+  N+    +IV
Sbjct: 2470 QVMLLEHTP-----PGSAILSVSATDRDSGANGHISYHLASPADG-FSVDPNNGTLFTIV 2523

Query: 203  DLSAL---NTSTIQLVVVATDTGNPPRQA 228
               AL    +  + +V+ A D G P R A
Sbjct: 2524 GTVALGHDGSGAVDVVLEARDHGTPGRAA 2552



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 35/101 (34%), Positives = 49/101 (48%), Gaps = 14/101 (13%)

Query: 79  YWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNV 135
           +W S D          G I+    LDYE E   + TV ATD     + +SATVN+++ +V
Sbjct: 607 HWFSID-------PTSGIITTAASLDYELEPQPQLTVVATDGGLPPLASSATVNVALQDV 659

Query: 136 NDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG 176
           ND +P+F+   Y   LP        PG+   +V A D D G
Sbjct: 660 NDNEPQFQRTFYNASLPE----GTQPGTCFLQVTATDADSG 696



 Score = 47.0 bits (110), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 61/213 (28%), Positives = 92/213 (43%), Gaps = 28/213 (13%)

Query: 31   LIVSKAGTSLRELQFSKNEYSVSALENLPVNYV----LLTVTTNKPRDLRVKYWLSNDYG 86
            ++V   GT     QF    Y V    +LP   +    +L V    P    V Y L+ +  
Sbjct: 1074 VVVQDVGTRGLAPQFDSPTYRV----DLPSGTIPGTQVLQVQAQAPDGGPVTYHLAAEGA 1129

Query: 87   ER-FSISRQ-GDISLMQCLDYETEDSYRFTVYATDT------LMTTSATVNISVVNVNDW 138
               F +  Q G + +   LD E ++ Y   V A           T +ATV +S++N N+ 
Sbjct: 1130 SSPFGLEPQSGWLWVRAALDREAQELYILKVMAVSGSKAELGQQTGTATVRVSILNQNEH 1189

Query: 139  DPRFRY-PQYELFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYE--KMFSI 193
             PR    P +     + P     PG+ +G+V A D D G   R+T SL+   E  K F I
Sbjct: 1190 SPRLSEDPTFLAVAENQP-----PGTNVGRVFATDRDSGPNGRLTYSLQQLSEDSKAFRI 1244

Query: 194  N-DSGHISIVD-LSALNTSTIQLVVVATDTGNP 224
            +  +G ++ +  L     ST QL+V   D G+P
Sbjct: 1245 HPQTGEVTTLQTLDREQQSTYQLLVQVQDGGSP 1277



 Score = 44.7 bits (104), Expect = 0.078,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 65/148 (43%), Gaps = 11/148 (7%)

Query: 13   LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKP 72
            L+V A  + +  R A   L VS A  +     F + EYSV   EN      LLT+    P
Sbjct: 1705 LIVVASDHGSPPRSATQVLTVSVADVNDEAPTFQQQEYSVLLRENSAPGTSLLTLRATDP 1764

Query: 73   RDLRVKYWLSNDYG----ERFSISRQ-GDISLMQCLDYETEDSYRFTVYATD---TLMTT 124
             DL     ++  YG      FS+    G ++ ++ LD E ++    TVYA D       T
Sbjct: 1765 -DLGANGQVT--YGGVSSGSFSLDPDTGVLTTLRALDREEQEEINLTVYAQDRGSPPQLT 1821

Query: 125  SATVNISVVNVNDWDPRFRYPQYELFLP 152
             AT+ ++V + ND  P F      L +P
Sbjct: 1822 HATIRVAVEDENDHAPTFGSTHLSLEVP 1849



 Score = 43.5 bits (101), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 34/116 (29%), Positives = 54/116 (46%), Gaps = 13/116 (11%)

Query: 87   ERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDTL-MTTSATVNISVVNVNDWDPRFRY 144
            E F++ S  G++      DYE  +S+R  V A D   ++ S TV++ V   +++DP F  
Sbjct: 2844 EAFALNSSTGELRARVAFDYEHTESFRLLVGAADAGNLSASVTVSVLVTGEDEYDPVFLA 2903

Query: 145  PQYELFLPHIPLADLTPGSVIGKVEAADGDKGDR----VTLSLRGPYEKMFSINDS 196
            P +   +P         G  +G V+A D D G       +L+   PY   F IN +
Sbjct: 2904 PAFHFQVPE----GARRGHSLGHVQATDEDGGADGLVLYSLATSSPY---FGINQT 2952



 Score = 43.5 bits (101), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 67/255 (26%), Positives = 107/255 (41%), Gaps = 44/255 (17%)

Query: 11   ITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTN 70
            + +V+ A  +    R A AT+ V     +     F+   Y V+  E+LP    LLT+   
Sbjct: 2536 VDVVLEARDHGTPGRAARATVHVQLQDQNDHAPSFTLPHYRVAVTEDLPPGSTLLTLEAT 2595

Query: 71   KPRDLR----VKYW-LSNDYGERFSISRQ---------------GDISLMQCLDYETEDS 110
                 R    V+Y  +S ++G  F +  +               G + L++ LD+E+   
Sbjct: 2596 DADGSRTHAAVEYSIISGNWGRVFQLEPRLAEAGESAGPGPQALGCLVLLEPLDFESLTQ 2655

Query: 111  YRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGK 167
            Y  TV A D      ++   V ++V++VND  P F    Y + +P     D   G+ +  
Sbjct: 2656 YNLTVAAADRGQPPQSSVVPVTVTVLDVNDNPPVFTRASYRVAVPE----DTPVGAELLH 2711

Query: 168  VEAADGDKGD----RVTLSLRGPYEKMFSIND-SGHISIVD-LSALNTSTIQLVVVATDT 221
            VEA+D D G     R T+S   P   +F +++ SG + +   L     +  QLVV A D 
Sbjct: 2712 VEASDVDPGPHGLVRFTVSSGDP-AGLFELDESSGTLRLAHALDCETQARHQLVVQAAD- 2769

Query: 222  GNPPRQASVPAIMHF 236
                     PA  HF
Sbjct: 2770 ---------PAGAHF 2775



 Score = 42.4 bits (98), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 59/229 (25%), Positives = 95/229 (41%), Gaps = 26/229 (11%)

Query: 13   LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVT---- 68
            L + A       R A   +IV   G + R  +F +        EN P    +++      
Sbjct: 2124 LFIVATDLGRPARSATGVIIVGLQGEAERGPRFPRTSSEAMIRENAPPGTPIVSPRAVHA 2183

Query: 69   --TNKPRDLRVKYWLSNDYGERFSIS-RQGDISL--MQCLDYETEDSYRFTVYATDTLMT 123
              TN P    +   LS +    FSI    G I++   + LD+E     R  + A      
Sbjct: 2184 GGTNGPITYSI---LSGNEKGTFSIQPSTGAITVRSAEGLDFEVSPRLRLVLQAESGGAF 2240

Query: 124  TSATVNISVVNVNDWDPRFRYPQYELFLPHI-PLADLTPGSVIGKVEAADGDKGD----R 178
                + +++ + ND  PRF  P Y  FLP   PL     G ++ +VEA D D+G      
Sbjct: 2241 AFTVLTLTLQDANDNAPRFLRPHYVAFLPESRPLE----GPLL-QVEADDLDQGSGGQIS 2295

Query: 179  VTLSLRGPYEKMFSINDSGHISIVDLSALNT---STIQLVVVATDTGNP 224
             +L+   P   +F + D    +I   + L+    +  +LV++ATD G+P
Sbjct: 2296 YSLAASQPARGLFHV-DPATGTITTTAILDREIWAETRLVLMATDRGSP 2343



 Score = 40.4 bits (93), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 26/94 (27%), Positives = 49/94 (52%), Gaps = 9/94 (9%)

Query: 95   GDISLMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFL 151
            G+   M+ LD E E +++  + A D     ++ +  + ++V++ ND  P F  P Y + +
Sbjct: 1893 GEFGTMRPLDREVEPAFQLRIEARDGGQPALSATLLLTVTVLDANDHAPAFPVPAYSVEV 1952

Query: 152  PHIPLADLTPGSVIGKVEAADGDKG--DRVTLSL 183
            P     D+  G+++ +++A D D G   RVT  L
Sbjct: 1953 PE----DVPAGTLLLQLQAHDPDAGANGRVTYYL 1982



 Score = 40.0 bits (92), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 55/197 (27%), Positives = 85/197 (43%), Gaps = 19/197 (9%)

Query: 42  ELQFSKNEYSVSALENLPVNYVLLTVT-TNKPRDL--RVKYWLSNDYGER----FSI-SR 93
           E QF +  Y+ S  E        L VT T+    L   + Y L    G      F I + 
Sbjct: 663 EPQFQRTFYNASLPEGTQPGTCFLQVTATDADSGLFGLLSYSLGAGLGSSGSPPFRIDAH 722

Query: 94  QGDISLMQCLDY-ETEDSYRFTVYATDTLMTTSAT-VNISVVNVNDWDPRFRYPQYELFL 151
            GD+   + LD  +   S+ FTV A D     S   V + + + ND  P+F   +Y   +
Sbjct: 723 SGDVCTTRTLDRDQGPSSFDFTVTAVDGGGLKSMVYVKVFLSDENDNPPQFYPREYAASI 782

Query: 152 PHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIND-SGHISIV-DLSA 206
                A   PG+ + +V A D D+G    LS   L G    +F++++ SG +++   L+ 
Sbjct: 783 ----SAQSPPGTAVLRVRAHDPDQGSHGRLSYHILAGNSPPLFALDEQSGLLTVAWPLAR 838

Query: 207 LNTSTIQLVVVATDTGN 223
              S +QL + A D G 
Sbjct: 839 RANSVVQLEIGAQDGGG 855



 Score = 39.3 bits (90), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 32/105 (30%), Positives = 51/105 (48%), Gaps = 8/105 (7%)

Query: 126  ATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSL 183
            A V + + +VND  P F  P+  + LP     +  PG+ I  + A D D G   RVT +L
Sbjct: 966  ARVRVLLDDVNDNSPAFPAPEDTVLLP----PNTAPGTPIYTLRALDPDSGVNSRVTFTL 1021

Query: 184  RGPYEKMFSIND-SGHISIV-DLSALNTSTIQLVVVATDTGNPPR 226
                   F+++  +GH+ ++  L        +L + A D G+PPR
Sbjct: 1022 LAGGGGAFTVDPTTGHVRLMRHLGPSGGPAHELELEARDGGSPPR 1066



 Score = 39.3 bits (90), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 45/163 (27%), Positives = 70/163 (42%), Gaps = 22/163 (13%)

Query: 89  FSI-SRQGDISLMQCLDYETEDSYRFTVYATDTLMTT---SATVNISVVNVNDWDPRFRY 144
           FSI +  G + L + LD+E    +   V A D        SA V + V + ND  P    
Sbjct: 393 FSIDAHTGLLQLERPLDFEQRRVHELVVQARDGGAHPELGSAFVTVHVRDANDNQPSMTV 452

Query: 145 PQYELFL-----PHIPLADLTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSINDSG 197
               +FL     P +  A   PG ++ ++  +D D GD   V +SL G  E  F+++   
Sbjct: 453 ----IFLSADGSPQVSEA-APPGQLVARISVSDPDDGDFAHVNVSLEG-GEGHFALSTQD 506

Query: 198 HISIV-----DLSALNTSTIQLVVVATDTGNPPRQASVPAIMH 235
            +  +      L         L V ATD+G+PP +A    ++H
Sbjct: 507 SVIYLVCVARRLDREERDAYNLRVTATDSGSPPLRAEAAFVLH 549


>gi|348518810|ref|XP_003446924.1| PREDICTED: protocadherin-16-like [Oreochromis niloticus]
          Length = 3281

 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 50/147 (34%), Positives = 74/147 (50%), Gaps = 16/147 (10%)

Query: 88   RFSISR-QGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQ 146
            +F I R  G +SL   LD+E +  Y  TV ATD+   T A + I V ++ND  P F +  
Sbjct: 2297 KFGIHRYSGGVSLTAPLDFEEKTWYTLTVRATDSQQQTEANITILVEDINDNAPAFTHDL 2356

Query: 147  YELFLP-HIPLADLTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSINDSGHISI-- 201
            Y++ LP H P     PGS +  V A D D G+  R+T  +    ++ F I D G+ ++  
Sbjct: 2357 YQVTLPEHTP-----PGSAVITVTATDRDSGENGRITYKVMSSTKEGFYI-DPGNGTLFI 2410

Query: 202  ---VDLSALNTSTIQLVVVATDTGNPP 225
               V+      S + +V+ A D G PP
Sbjct: 2411 NHRVEFDPERPS-VSIVIEARDRGLPP 2436



 Score = 55.5 bits (132), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 49/142 (34%), Positives = 70/142 (49%), Gaps = 11/142 (7%)

Query: 95   GDISLMQCLDYETEDSYRFTVYATD----TLMTTSATVNISVVNVNDWDPRFRYPQYELF 150
            G + +   LD E +D +  TV AT        T SATV ++V + ND  PR    Q  +F
Sbjct: 1043 GWLFVRSSLDREVKDMFLLTVLATSGPGGAGRTGSATVRVTVTDENDNSPRLS--QERVF 1100

Query: 151  LPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPY-EKMFSIN-DSGHISI-VDLSAL 207
            L      +L  G+  G+V A D D G    L+ R  + ++ F IN  +G IS  + L   
Sbjct: 1101 L--AVRENLHAGTGFGRVSATDRDAGLNARLTYRLLHTDRHFQINSQTGEISTRLALDRE 1158

Query: 208  NTSTIQLVVVATDTGNPPRQAS 229
              S+ Q++VV  D G PPR A+
Sbjct: 1159 QQSSYQVIVVVQDGGTPPRSAT 1180



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 63/205 (30%), Positives = 97/205 (47%), Gaps = 16/205 (7%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVT-TNKPRDL--RVKYWLSNDYGERFSISRQ-GDISLM 100
            FSK+ YSV   E+      +L V+ T+   DL  +V Y+LS +    F++    G I+  
Sbjct: 1837 FSKSSYSVEISEDATEGAQVLEVSATDADEDLNGKVLYFLSREAHGAFTVDEHNGRITTS 1896

Query: 101  QCLDYETEDSYRFTVYATD----TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
              LD E   SY F V+A D        +SA V ++V++VND  P F   Q  L    I +
Sbjct: 1897 APLDREKLASYSFQVFAVDLSPAAPRNSSAQVTVTVLDVNDNTPFFI--QDPLV---IEV 1951

Query: 157  ADLTPGSVIGKVEAADGDKGDRVTLSLRGPYE-KMFSIND-SGHISIVD-LSALNTSTIQ 213
            ++     V+  ++A D D G   ++  R     K FSIN  +G I   + L+ L  +   
Sbjct: 1952 SNRRSQRVLATMKAEDKDFGANGSVFYRFATPVKGFSINSLTGEIQATERLADLTQAQRT 2011

Query: 214  LVVVATDTGNPPRQASVPAIMHFPE 238
            L+V A D G+P +      I++  E
Sbjct: 2012 LIVEAMDQGSPAQSTRGVVIIYVKE 2036



 Score = 48.1 bits (113), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 47/141 (33%), Positives = 68/141 (48%), Gaps = 18/141 (12%)

Query: 97  ISLMQCLDYETEDSYRFTVYATDTL---MTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
           I + Q LD E  DSY   V ATD+    +   ++  I V +VND  P F    Y   +P 
Sbjct: 397 IYVDQVLDREERDSYDLRVMATDSGTPPLRAESSFTIQVTDVNDNPPLFDQQAYRQTIPE 456

Query: 154 IPLADLTPGSVIGKVEAADGDKGD----RVTLSLRGP--YEKMFSINDSGHISIVDLSAL 207
           +    + PGS + +V A D D+G     R +L L+G   +   FSI+    I I   +AL
Sbjct: 457 V----VYPGSFVLQVTARDKDQGPNGDVRYSL-LKGKNSHSDWFSIDPVTGI-ITTATAL 510

Query: 208 NTST---IQLVVVATDTGNPP 225
           +  +     + VVA D+G PP
Sbjct: 511 DFESEPAPSVTVVAMDSGRPP 531



 Score = 45.4 bits (106), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 47/176 (26%), Positives = 78/176 (44%), Gaps = 13/176 (7%)

Query: 9    QPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNY---VLL 65
            QP T VV     D Q  +ALA +IV     +     F  +    S  EN P N    VL 
Sbjct: 2642 QP-THVVIVQATDGQGHFALAPVIVEVKDVNDNHPFFPVDVLIASIRENQPANSAVTVLH 2700

Query: 66   TVTTNKPRDLRVKYWLSNDYG---ERFSISR-QGDISLMQCLDYETEDSYRFTVYATDTL 121
             +  +     ++KY++    G   E F++ +  G+I      D+E  +++ F   A D+ 
Sbjct: 2701 AIDHDTGVFGQLKYYMLERSGAGKESFAVDQNSGEIRSKIPFDFEKVNTFSFVAVAVDSG 2760

Query: 122  -MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG 176
              + + TV + V   +++DP F    +   +P         G  IG+V+A+D D+G
Sbjct: 2761 NHSATVTVQVFVTGEDEYDPLFTSSDFSFEVPE----GAKKGQSIGQVQASDEDEG 2812



 Score = 45.4 bits (106), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 46/146 (31%), Positives = 66/146 (45%), Gaps = 10/146 (6%)

Query: 89   FSISRQ-GDISLMQCLDYETEDSYRFTVYATDTLM---TTSATVNISVVNVNDWDPRFRY 144
            F I+ Q G+IS    LD E + SY+  V   D      + + T +I+V++ ND  P F +
Sbjct: 1140 FQINSQTGEISTRLALDREQQSSYQVIVVVQDGGTPPRSATGTAHITVLDENDHAPSFIH 1199

Query: 145  --PQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTL--SLRGPYEKMFSIN-DSGHI 199
              P  +          L  G+VIG V A D D+G+  T+  SL G   + FSIN  +G +
Sbjct: 1200 ARPDRDNNTSLQVTEGLPSGTVIGTVAAKDPDEGENGTIYYSLSGSRAERFSINPTTGEL 1259

Query: 200  SIVD-LSALNTSTIQLVVVATDTGNP 224
                 L     +     V A D G P
Sbjct: 1260 RTASPLRLTERAEYAFTVTAADHGAP 1285



 Score = 44.7 bits (104), Expect = 0.076,   Method: Compositional matrix adjust.
 Identities = 60/226 (26%), Positives = 100/226 (44%), Gaps = 19/226 (8%)

Query: 12   TLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNK 71
            TL+V A+   +  +     +I+         ++FS+N   VS  EN      +       
Sbjct: 2011 TLIVEAMDQGSPAQSTRGVVIIYVKEVEYSGIRFSRNARDVSIQENAAKGTTVAQAQAQY 2070

Query: 72   PRDLR--VKYWL-SNDYGERFSISRQ-GDISLM--QCLDYETEDSYRFTVYATDTLMTTS 125
            P   R  + Y L S +  + F+IS   G+I +   + LD+E     R  V A     T+ 
Sbjct: 2071 PDGSRNGISYSLFSGNRKQAFTISSSTGEIRVQTSKELDFEDAPRLRLVVKAETVSSTSY 2130

Query: 126  ATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGD--RVTLSL 183
               N+ + +VND  PRF+   Y  ++      ++     I +V A D D+G   +VT S+
Sbjct: 2131 MAFNLILQDVNDNLPRFQLQNYVAYMKEAQGYEMP----IIQVVAEDVDQGQNGQVTYSI 2186

Query: 184  R-GPYEKMFSIND-SGHI---SIVDLSALNTSTIQLVVVATDTGNP 224
            +      +F I+  +G I   +I+D      +  +LVV ATD G+P
Sbjct: 2187 QSSSMSGLFKIDPVTGSITTAAIMDREIFTQT--KLVVTATDRGSP 2230



 Score = 43.9 bits (102), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 61/201 (30%), Positives = 87/201 (43%), Gaps = 25/201 (12%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYG----ERFSISR-QGDISL 99
            F + E+    +EN      +LTVT    RD      ++  YG    E F I+   G I+ 
Sbjct: 1631 FLRAEFEAQVMENQGPGASVLTVTATD-RDQGSNGQIT--YGGVSEEGFIINPVTGTITT 1687

Query: 100  MQCLDYETEDSYRFTVYATDTLMT---TSATVNISVVNVNDWDPRFRYPQYELFLP--HI 154
             + LD E +D Y  TVYA D  +        V ++V +VND  P F  P Y L +P    
Sbjct: 1688 TKELDTELQDHYTLTVYARDGGLPPNFAKTVVRVAVQDVNDNAPIFAKPFYGLEVPENQA 1747

Query: 155  PLADLTPGSVIGKVEAADGDKGDRVTLSLR---GPYEKMFSINDS-GHISIV-DLSALNT 209
            P+        +  ++A D D G    L  R   G  +  F ++ S G +S    L     
Sbjct: 1748 PVE-------LCILKATDPDSGPGGELEYRIAAGDPDGDFQLHASTGALSTSRGLDRETH 1800

Query: 210  STIQLVVVATDTGNPPRQASV 230
            +   L VVATD G+P   A+V
Sbjct: 1801 AKYTLEVVATDRGSPALSATV 1821


>gi|158260375|dbj|BAF82365.1| unnamed protein product [Homo sapiens]
          Length = 889

 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 68/216 (31%), Positives = 99/216 (45%), Gaps = 20/216 (9%)

Query: 45  FSKNEYSVSALENLPVNYV--LLTVTTNKPRDLRVKYWLSNDYGERFSISRQ-GDISLMQ 101
           F+ NEY     ENLP +    L+TVT     D         D  + F+I  Q G I    
Sbjct: 591 FTHNEYKFYVPENLPRHGTVGLITVTDPDYGDNSAVTLSILDENDDFTIDSQTGVIRPNI 650

Query: 102 CLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYP----QYELFLPHI 154
             D E ++SY F V A D      ++SA V I+VV+VND  P F  P     YEL LP  
Sbjct: 651 SFDREKQESYTFYVKAEDGGRVSRSSSAKVTINVVDVNDNKPVFIVPPYNYSYELVLPST 710

Query: 155 PLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-DSGHISIVDLSALNTS 210
                 PG+V+ +V A D D G    +    + G    +F+I+ ++G+I++++   +   
Sbjct: 711 -----NPGTVVFQVIAVDNDTGMNAEVRYSIVGGNTRDLFAIDQETGNITLMEKCDVTDL 765

Query: 211 TIQLVVV-ATDTGNPPRQASVPAIMHFPEAIVQQAS 245
            +  V+V A D G P    SV  +  F    V  A+
Sbjct: 766 GLHRVLVKANDLGQPDSLFSVVIVNLFVNESVTNAT 801



 Score = 58.2 bits (139), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 37/114 (32%), Positives = 62/114 (54%), Gaps = 10/114 (8%)

Query: 76  RVKYWLSNDYGERFSISRQ-GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNIS 131
            + Y L  D    FS+ R+ G +++++ LD E ED Y FT+ A D     +T++ TV +S
Sbjct: 521 EINYLLGPDAPPEFSLDRRTGMLTVVKKLDREKEDKYLFTILAKDNGVPPLTSNVTVFVS 580

Query: 132 VVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDR--VTLSL 183
           +++ ND  P F + +Y+ ++P     +L     +G +   D D GD   VTLS+
Sbjct: 581 IIDQNDNSPVFTHNEYKFYVPE----NLPRHGTVGLITVTDPDYGDNSAVTLSI 630



 Score = 38.5 bits (88), Expect = 6.3,   Method: Compositional matrix adjust.
 Identities = 36/139 (25%), Positives = 67/139 (48%), Gaps = 15/139 (10%)

Query: 103 LDYETEDSYRFTVYATDTLM---TTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADL 159
           LD E +D+Y   V   D      +++A + +SV + ND  P F+  + E+ +P     + 
Sbjct: 228 LDREEKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVFKETEIEVSIPE----NA 283

Query: 160 TPGSVIGKVEAADGDKGDRVTLS------LRGPYEKMFSIN-DSGHISIVD-LSALNTST 211
             G+ + ++ A D D G+   +       +     ++F +N  +G I+I + L    T  
Sbjct: 284 PVGTSVTQLHATDADIGENAKIHFSFSNLVSNIARRLFHLNATTGLITIKEPLDREETPN 343

Query: 212 IQLVVVATDTGNPPRQASV 230
            +L+V+A+D G  P +A V
Sbjct: 344 HKLLVLASDGGLMPARAMV 362


>gi|109732291|gb|AAI15721.1| Protocadherin beta 16 [Mus musculus]
          Length = 802

 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 48/148 (32%), Positives = 74/148 (50%), Gaps = 14/148 (9%)

Query: 95  GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFL 151
           G + +++ LDYE   ++ F V ATD     +++ A V + V++ ND  P   YP      
Sbjct: 512 GQLFVLRALDYEALQAFEFHVGATDGGSPALSSQALVRVVVLDDNDNAPFVLYPMQNASA 571

Query: 152 PH---IPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSI---NDSGHISIV 202
           P+   +P A   PG ++ KV A D D G    LS   L+     +FS+   N   H S +
Sbjct: 572 PYTELLPRA-AEPGYLVTKVVAVDRDSGQNAWLSFQLLKATEPGLFSVWAHNGEVHTSRL 630

Query: 203 DLSALNTSTIQLVVVATDTGNPPRQASV 230
            LS  +    +L+++  D G+PPR ASV
Sbjct: 631 -LSERDVHKHRLILLVKDNGDPPRSASV 657



 Score = 40.8 bits (94), Expect = 0.99,   Method: Compositional matrix adjust.
 Identities = 29/107 (27%), Positives = 52/107 (48%), Gaps = 10/107 (9%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVK-------YWLSNDYGERFSIS-RQG 95
           QF +  Y     E+ P+ ++++TV+    +D+ V        + +S+D  + FSI    G
Sbjct: 242 QFEQLFYKAQIPEDSPIGFLIITVSATD-KDIGVNGQISYSLFQVSDDISKTFSIHPLTG 300

Query: 96  DISLMQCLDYETEDSYRFTVYATDT-LMTTSATVNISVVNVNDWDPR 141
           ++ L + LD+E   SY   + A D    +   T+   V++VND  P 
Sbjct: 301 EVRLKEHLDFEKTQSYEINIEARDAGTFSGKCTILAQVLDVNDHAPE 347


>gi|359324191|ref|XP_851109.3| PREDICTED: LOW QUALITY PROTEIN: protocadherin-11 X-linked [Canis
           lupus familiaris]
          Length = 1308

 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 83/315 (26%), Positives = 138/315 (43%), Gaps = 52/315 (16%)

Query: 11  ITLVVRAIQYDNQDRYALATL--------IVSKAGTSLRELQ-------FSKNEYSVSAL 55
           I  VV+ +  + Q++Y+   L        +++ A  S+  L        F+ NEY+    
Sbjct: 521 ILTVVKKLDREKQEKYSFTVLAKDKGMPSLITNATVSVTILDQNDNSPIFTHNEYNFYVP 580

Query: 56  ENLPVNYV--LLTVTTNKPRDLRVKYWLSNDYGERFSISRQ-GDISLMQCLDYETEDSYR 112
           ENLP +    L+TVT     +  V      D  + F+I  Q G I      D E ++ Y 
Sbjct: 581 ENLPRHGTVGLITVTDPDYGENSVVTLSILDLNDEFTIDPQTGVIQPNISFDREKQERYT 640

Query: 113 FTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQ----YELFLPHIPLADLTPGSVI 165
           F V A D      +++A V I+VV+VND  P F  P     YEL LP        PG+V+
Sbjct: 641 FYVKAEDGGKISHSSTAKVTINVVDVNDNKPVFIVPSSNNSYELVLP-----STNPGTVV 695

Query: 166 GKVEAADGDKGDRVTLS---LRGPYEKMFSIND-SGHISIVDLSALNTSTI-QLVVVATD 220
             V A D D G    L    + G  + +F I+  +G+I++ +   +    + +L++ A D
Sbjct: 696 FTVFAVDNDTGMNAELHYSIVGGNTKSLFIIDQTTGNITLKEKCVVTDLGLHRLIIKAKD 755

Query: 221 TGNPPRQASVPAIMHFPEAIVQQA---------------SSKLNS--GTSSTVLIILGVV 263
            G P    +V  +  F    V  A               + K+ +   +SST   +  +V
Sbjct: 756 LGQPESLFNVVTVNLFVNESVTNATWIHELVYKNIEAPVAPKIGTTDASSSTSDYVKIMV 815

Query: 264 LIVLGFVIILLILYI 278
            I+ G + ++L+++I
Sbjct: 816 AIIAGTITVILVIFI 830



 Score = 51.6 bits (122), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 41/148 (27%), Positives = 74/148 (50%), Gaps = 13/148 (8%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGERFSISRQ-GDISLM 100
           F++   S+S LEN      L  ++    +   +  + Y L  D    F++    G ++++
Sbjct: 466 FTQPLISLSLLENNSPGTKLTEISAMDADSGHNAEINYLLGVDAPSEFNLDHHTGILTVV 525

Query: 101 QCLDYETEDSYRFTVYATDTLM---TTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLA 157
           + LD E ++ Y FTV A D  M    T+ATV++++++ ND  P F + +Y  ++P     
Sbjct: 526 KKLDREKQEKYSFTVLAKDKGMPSLITNATVSVTILDQNDNSPIFTHNEYNFYVPE---- 581

Query: 158 DLTPGSVIGKVEAADGDKGDR--VTLSL 183
           +L     +G +   D D G+   VTLS+
Sbjct: 582 NLPRHGTVGLITVTDPDYGENSVVTLSI 609


>gi|301770611|ref|XP_002920723.1| PREDICTED: protocadherin Fat 1-like [Ailuropoda melanoleuca]
          Length = 4587

 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 47/202 (23%), Positives = 90/202 (44%), Gaps = 30/202 (14%)

Query: 7    FLQPITLVVRAIQYDNQDRYALATL-------------------IVSKAGTSLRELQFSK 47
            F++P T VV + ++     Y + ++                    +SK   S+  + F +
Sbjct: 1300 FIEPKTGVVSSKKFSGAGEYDILSIKAVDNGRPQKSSTTRLHIEWISKPKPSVGPISFEE 1359

Query: 48   NEYSVSALENLPVNYVLLTVTTNKPRDLRVKYW---LSNDYGERFSISR-QGDISLMQCL 103
              +S + +E+ PV +++  ++   P       W   +  +    F + +  G I + + L
Sbjct: 1360 PSFSFTVMESDPVAHMIGVISVEPPG---TPLWFDIIGGNSDSHFDVDKGTGTIIVAKAL 1416

Query: 104  DYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGS 163
            D E + SY  TV ATD        V I V++ ND  P+F   +YE+ +P     D  P +
Sbjct: 1417 DAEQKSSYDLTVEATDGTTAVLTQVFIKVIDTNDHRPQFSASKYEVVIPE----DTVPET 1472

Query: 164  VIGKVEAADGDKGDRVTLSLRG 185
             I ++ A D D+ +++  +L+G
Sbjct: 1473 EILQISAVDKDEKNKLIYTLQG 1494



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 59/217 (27%), Positives = 103/217 (47%), Gaps = 18/217 (8%)

Query: 29   ATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWLSNDY 85
            A + ++  G +L    F ++EY V   EN P++ +++ V            + Y + ND+
Sbjct: 2475 AQVHITVIGGNLHSPVFPQSEYEVELAENAPLHTLVIEVKAADGDSGIYGHITYHIVNDF 2534

Query: 86   G-ERFSISRQGDISLMQCLDYET--EDSYRFTVYATDTLMTTS-ATVNISVVNVNDWDPR 141
              +RF  + +G I  ++ LD ET  E      + A D     +  T+N+ + + ND  P+
Sbjct: 2535 AKDRFYTNERGQIFTLEKLDRETPVEKVISVRLMAKDAGGKVAFCTINVILTDDNDNAPQ 2594

Query: 142  FRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDR--VTLSLRGPYEKM---FSIND- 195
            FR  +YE+ +     ++   G+ + KV A+D D+G    VT ++    E +     IN  
Sbjct: 2595 FRATRYEVDIG----SNAPKGTSVIKVLASDADEGSNADVTYAIEADSESVKENLEINKL 2650

Query: 196  SGHISIVD-LSALNTSTIQLVVVATDTGNPPRQASVP 231
            SG I+  + L  L        V A D+G+P R++ VP
Sbjct: 2651 SGIITTKESLIGLENEFFTFFVRAVDSGSPSRESVVP 2687



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 43/145 (29%), Positives = 71/145 (48%), Gaps = 8/145 (5%)

Query: 90   SISRQGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYEL 149
            +I  +  + + + LD E  D+Y  T+ ATD   ++ A V + V++ ND  P      Y  
Sbjct: 2970 NIQNEWKVYVKKPLDREKRDNYLLTITATDGTFSSKAIVEVKVLDANDNSPVCEKTLYSD 3029

Query: 150  FLPHIPLADLTPGSVIGKVEAADGD--KGDRVTLSLRGPYEKMFSIN-DSGHI-SIVDLS 205
             +P     D +PG +I +V A D D      +T +L GP  + F++N D+G + ++  L 
Sbjct: 3030 TVPE----DASPGQLILQVSATDADIRSNAEITYTLLGPGAEKFTLNPDTGELRTLAPLD 3085

Query: 206  ALNTSTIQLVVVATDTGNPPRQASV 230
                    L+V ATD G    QA++
Sbjct: 3086 REEQGVYNLLVKATDGGGRSCQANL 3110



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 57/201 (28%), Positives = 96/201 (47%), Gaps = 23/201 (11%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSN-DYGERFSIS-RQGDISLMQC 102
            F K  YS    EN+ ++  ++ +  + P   +V Y +++ D   +F+++   G IS++  
Sbjct: 2181 FEKPFYSAEVPENVQLHSPVVHIQADSPEGFKVFYSITDGDPFSQFTVNFNTGVISVIAP 2240

Query: 103  LDYETEDSYRFTVYATDTLMTTSATV--NISVVNVNDWDPRFRYPQYELFLPHIPLADLT 160
            LD+E+  +Y+ ++ ATD+L    A V  +I V ++ND  P F +  Y           L+
Sbjct: 2241 LDFESHPAYKLSIRATDSLTGAHADVFADIIVEDINDSPPVFVHQSY--------ATTLS 2292

Query: 161  PGSVIG----KVEAADGDK--GDRVTLSLRGPYEK---MFSINDS-GHISIVD-LSALNT 209
              SVIG    +V A D D      ++  + G + K    F I+ S G IS+V  L     
Sbjct: 2293 EASVIGTSVVQVRATDSDSEPNRGISYHMFGNHSKSHDHFHIDSSTGLISLVRTLDYEQF 2352

Query: 210  STIQLVVVATDTGNPPRQASV 230
               ++ V A D G PP  + V
Sbjct: 2353 QQHKIFVRAVDGGMPPLSSDV 2373



 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 71/279 (25%), Positives = 128/279 (45%), Gaps = 30/279 (10%)

Query: 27   ALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLS---- 82
            A  T++VS    +     F   +Y  +  E++ +   +L V     RD+     ++    
Sbjct: 3211 ATGTVVVSVLDINDNPPVFEYRDYGATVSEDVLIGTEVLQVYAVS-RDIEANAEITYSIM 3269

Query: 83   --NDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVN 136
              N++G +FSI SR G I +++ LDYE+   Y  T+ A D     ++  ATV+I+V ++N
Sbjct: 3270 SGNEHG-KFSIDSRTGAIFVIENLDYESSREYYLTIEAMDGGTPSLSDVATVSINVTDIN 3328

Query: 137  DWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS-LRGPYEKMFSIND 195
            D  P F    Y   +    L + +  +V+   + ADG     +  S + G     F+++ 
Sbjct: 3329 DNSPVFSQDTYTAVVSEDALLEQSVITVMA--DDADGPSNSHIRYSIIDGNQGSPFTVDP 3386

Query: 196  S-GHISIVDLSALNTSTIQ---LVVVATDTGNPPRQASVPAIMHFPEAIVQQASSKLNSG 251
            + G + +  L  L+  TI    L V A+D G+PPR  +    +   +  V   +   + G
Sbjct: 3387 TRGEVKVTKL--LDRETISGYTLTVQASDNGSPPRVNTTTVNIDVSD--VNDNAPVFSKG 3442

Query: 252  TSSTVLIILGVVLIVLGFVIILLILYIHKNKHTKNNGPP 290
              S ++     V    GF ++ L++    +K + +NGPP
Sbjct: 3443 NYSVIIQENKPV----GFSVLQLVV---SDKDSSHNGPP 3474



 Score = 51.6 bits (122), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 62/236 (26%), Positives = 108/236 (45%), Gaps = 24/236 (10%)

Query: 4    EDDFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYV 63
            E++F    T  VRA+   +  R ++  + V      ++  +FS+  Y+ +  E++P+   
Sbjct: 2664 ENEFF---TFFVRAVDSGSPSRESVVPVYVKILPPEIQLPKFSEPFYTYTVSEDMPIGTE 2720

Query: 64   LLTVTTNKPRDLRVKYWLSN----DYGERFSISRQ-GDISLMQCLDYETEDSYRFTVYAT 118
            +  +       +       N    +  E F I RQ G + L + LD+E    Y+F++ A 
Sbjct: 2721 IDLIRAEHSGTVLYSLIKGNTPESNRDEFFVIDRQSGRLKLEKSLDHEITKWYQFSILAR 2780

Query: 119  ----DTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGD 174
                D  +  S  V+I V + ND  P      YE F+    + +L  GS + +V A+D D
Sbjct: 2781 CTHDDYEVVASVDVSIQVKDANDNSPVLESNPYEAFI----VENLPAGSRVIQVRASDLD 2836

Query: 175  KG--DRVTLSLRGPYE----KMFSIN-DSGHISIV-DLSALNTSTIQLVVVATDTG 222
             G   +VT SL         + F+IN ++G I+ + +L      + Q+ VVA+D G
Sbjct: 2837 SGTNGQVTYSLDQSQSMEVIESFAINVETGWITTLKELDHEKRDSYQIQVVASDHG 2892



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 63/226 (27%), Positives = 103/226 (45%), Gaps = 21/226 (9%)

Query: 13   LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKP 72
            L+V+A   D   R   A L+++    +    +FS + Y+++  EN      LLT      
Sbjct: 3094 LLVKAT--DGGGRSCQANLVLTLEDVNDNAPEFSADPYTITVFENTEPG-TLLTRVQATD 3150

Query: 73   RD----LRVKYWLSNDYGERFSISR-QGDISLMQCLDYETEDSYRFTVYATDT----LMT 123
            RD     ++ Y L N    +FSI+   G I L + LD E +  Y  T+ A D      +T
Sbjct: 3151 RDSGLNRKISYSLVNSVDGQFSINELSGIIQLEKPLDREQQAVYSLTLKAVDQGLPRRLT 3210

Query: 124  TSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAA--DGDKGDRVTL 181
             + TV +SV+++ND  P F Y  Y   +      D+  G+ + +V A   D +    +T 
Sbjct: 3211 ATGTVVVSVLDINDNPPVFEYRDYGATVSE----DVLIGTEVLQVYAVSRDIEANAEITY 3266

Query: 182  S-LRGPYEKMFSIND-SGHISIVD-LSALNTSTIQLVVVATDTGNP 224
            S + G     FSI+  +G I +++ L   ++    L + A D G P
Sbjct: 3267 SIMSGNEHGKFSIDSRTGAIFVIENLDYESSREYYLTIEAMDGGTP 3312



 Score = 44.3 bits (103), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 54/195 (27%), Positives = 87/195 (44%), Gaps = 20/195 (10%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTTNKPRDL----RVKYWLSNDYGERFSISR-QGDIS 98
            +F +  Y V   E+  +N  ++ V     +DL     V Y +  D  ++FSI    G + 
Sbjct: 820  EFLQESYFVEVSEDKEINSEIIQVEATD-KDLGPNGHVTYSVLTD-TDKFSIDGVTGVVK 877

Query: 99   LMQCLDYETEDSYRFTVYATDTL-----MTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
            +M+ LD E +  +   + A D       + ++  + +S+ +VND  P+F  P Y + +  
Sbjct: 878  VMRPLDREAQHVHYLKIEARDQAREEPQLLSTVLLKVSLEDVNDNPPKFVPPNYRVKV-- 935

Query: 154  IPLADLTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSIND-SGHISIVD-LSALNT 209
                DL  G++I  +EA D D G   +V  SL    E  F ++  SG + IV  L     
Sbjct: 936  --REDLPEGTIIMWLEAYDPDLGQSSQVRYSLLDHGEGHFDVDKLSGAVRIVQHLDFEKK 993

Query: 210  STIQLVVVATDTGNP 224
                L V A D G P
Sbjct: 994  QVYNLTVRAKDKGKP 1008



 Score = 44.3 bits (103), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 42/161 (26%), Positives = 74/161 (45%), Gaps = 12/161 (7%)

Query: 45   FSKNEYSVSALENLPVNY-VLLTVTTNKPRDLRVKYWL----SNDYGERFSISRQGDISL 99
            FSK  YSV   EN PV + VL  V ++K        +     S +    F +++QG +  
Sbjct: 3439 FSKGNYSVIIQENKPVGFSVLQLVVSDKDSSHNGPPFFFSVVSGNDDRAFEVNQQGVLLT 3498

Query: 100  MQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
               +  + +D Y   V   D     +++ A ++I ++  + + P       E+F+     
Sbjct: 3499 SAAIKRKVKDHYLLHVKVADNGKPPLSSLAYIDIRIIEESIYPPAIL--PLEIFI--TAF 3554

Query: 157  ADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSG 197
             +   G VIGK+ A D D  D +T SL    +++FS++ +G
Sbjct: 3555 GEEYSGGVIGKIHATDQDVYDTLTYSLDPQMDQLFSVSSTG 3595



 Score = 43.5 bits (101), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 54/191 (28%), Positives = 86/191 (45%), Gaps = 30/191 (15%)

Query: 56   ENLPVNYVLLTVTTNKP---RDLRVKYWLSNDYG-ERFSISRQ-GDISLMQCLDYETEDS 110
            E++PV + ++TV+ +     RD  V+Y + +  G   F I  + G +   + LD E+   
Sbjct: 1044 EDVPVGFSIMTVSAHDEDTGRDGEVRYSIRDGSGVGVFRIDEETGVVETAERLDRESTPH 1103

Query: 111  YRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSV-IG 166
            Y  TVYATD     +++   + I V +VND  P+   P   ++ P I   + +P  V + 
Sbjct: 1104 YWLTVYATDRGVVPLSSFVEIYIEVEDVNDNAPQTSEP---VYYPEI--IENSPKDVSVV 1158

Query: 167  KVEAADGDKGDRVTLSLRGPYEKMFSINDSGHISIVDLSALNTSTIQ-----------LV 215
             +EA D D      L       K+ S N  G  S+   + L T+T +           L 
Sbjct: 1159 HIEAFDPDSSSNDKLMY-----KITSGNPQGFFSVHPKTGLITTTSRKLDREQQDEHILE 1213

Query: 216  VVATDTGNPPR 226
            V  TD G PP+
Sbjct: 1214 VTVTDNGIPPK 1224



 Score = 39.3 bits (90), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 56/199 (28%), Positives = 87/199 (43%), Gaps = 30/199 (15%)

Query: 45   FSKNEYSVSALENLPVNYVLLT--------VTTNKPRD---LRVKYWLSNDYGERFSI-S 92
            F++ EY+    E+  +N V+LT          T+  R+   L V + +     + F+I S
Sbjct: 1764 FTQAEYTGLISESASINSVVLTDKNVPLVIRATDADRESNALLVYHIVEPSLHKYFAIDS 1823

Query: 93   RQGDISLMQCLDYETEDSYRFTVYATDT-----LMTTSATVNISVVNVNDWDPRFRYPQY 147
              G I  +  LDYE   ++ FTV   D          +A V I V+++ND  P F    Y
Sbjct: 1824 STGAIHTVLSLDYEETRTFHFTVQVHDMGTPRLFAEYAANVTIRVIDINDCPPVFSKSLY 1883

Query: 148  E--LFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPY--EKMFSINDSGHISI 201
            E  L LP         G  +  V A D D     +V  S+      EK+F  + +G I++
Sbjct: 1884 EASLLLP------TYRGVKVITVNATDADSSAFSQVMYSITEGNIGEKLFMDHRTGAITV 1937

Query: 202  VDLSALNTSTIQLVVVATD 220
             + + L  S  +L V A+D
Sbjct: 1938 QNTTQLR-SRYELTVRASD 1955



 Score = 38.1 bits (87), Expect = 8.1,   Method: Compositional matrix adjust.
 Identities = 44/142 (30%), Positives = 70/142 (49%), Gaps = 22/142 (15%)

Query: 48   NEYSVSALENLPVNYVLLTVTTNKPRDL------RVKYWL----SNDYGERFSISRQ-GD 96
            N Y    +ENLP    ++ V   +  DL      +V Y L    S +  E F+I+ + G 
Sbjct: 2811 NPYEAFIVENLPAGSRVIQV---RASDLDSGTNGQVTYSLDQSQSMEVIESFAINVETGW 2867

Query: 97   ISLMQCLDYETEDSYRFTVYATD----TLMTTSATVNISVVNVNDWDPRFRYPQYELFLP 152
            I+ ++ LD+E  DSY+  V A+D      ++++A V+++V +VND  PRF    Y+  + 
Sbjct: 2868 ITTLKELDHEKRDSYQIQVVASDHGEKVQLSSTAVVDVTVTDVNDSPPRFTAEIYKGTVS 2927

Query: 153  HIPLADLTPGSVIGKVEAADGD 174
                 D  PG VI  +   D D
Sbjct: 2928 E----DDPPGGVIAILSTTDAD 2945


>gi|17539700|ref|NP_501487.1| Protein CDH-5, isoform b [Caenorhabditis elegans]
 gi|351060023|emb|CCD67648.1| Protein CDH-5, isoform b [Caenorhabditis elegans]
          Length = 1306

 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 55/178 (30%), Positives = 83/178 (46%), Gaps = 11/178 (6%)

Query: 56  ENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTV 115
           EN P N V++++     R+L     +  +   +F+I   G I   + LD E    Y   V
Sbjct: 252 ENTPPNTVVVSLGDESSRELTYFNVVGGNEEGKFAIDDAGTIVTAEELDREKTAMYSLQV 311

Query: 116 YATDT-----LMTTSATVNISVVNVNDWDPRFRYPQ-YELFLPHIPLADLTPGSVIGK-- 167
                     L  T   V ++V++VND  P F  PQ   L L    +  LT   +IG+  
Sbjct: 312 ETRSRNPDQHLYWT--LVQVTVMDVNDNAPTFTDPQPIRLRLSIDDIEQLTGNMIIGRIG 369

Query: 168 VEAADGDKGDRVTLSLRGPYEKMFSINDSGHISI-VDLSALNTSTIQLVVVATDTGNP 224
           VE AD D   R+ L +  P+ K+F+I++ G +S+  D +A +     L VVA D G P
Sbjct: 370 VEDADADDNGRLELRIMPPHNKLFAISNDGILSVNGDFTAAHFGEHDLTVVARDHGEP 427



 Score = 51.6 bits (122), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 44/164 (26%), Positives = 73/164 (44%), Gaps = 19/164 (11%)

Query: 77  VKYWLSNDYGERFSISR-QGDISLMQCLDYETEDSYRFTVYAT-------DTLMTTSATV 128
           + Y L       FS+S   G ++L++ LD ET  +    +  +       D  +    ++
Sbjct: 592 ITYVLHKGDPSLFSVSSYSGSVNLLRALDAETNSTVTIQISTSEAQTLEVDPKLAHFVSI 651

Query: 129 NISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGD-----RVTLSL 183
            I+V + NDW P F    YE  +      D  PG+++G+V A D D+ +     R  L  
Sbjct: 652 TINVADKNDWIPNFESASYEFDVKE----DTLPGTIVGQVNAFDQDRDEPNNRIRYRLLS 707

Query: 184 RGPYEKMFSIN-DSGHISIVD-LSALNTSTIQLVVVATDTGNPP 225
            G  E  F++N +SG I++   + A     I L +   D+G  P
Sbjct: 708 AGGLEAHFNVNAESGLITLARPIDAFAGEKITLRIEGADSGMLP 751



 Score = 47.8 bits (112), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 38/110 (34%), Positives = 53/110 (48%), Gaps = 7/110 (6%)

Query: 42  ELQFSKNEYSVSALENL-PVNYVLLTVTTNKPRDLR--VKYWLSNDYGERFSISRQGD-- 96
           ELQFS   Y+ S  E + P + V +    NKP D R  +   +S +Y   F I+   D  
Sbjct: 784 ELQFSLRNYTASVSEAVRPPHLVQVLSVMNKPTDTRFIICNIISGNYRGAFGITAGNDGN 843

Query: 97  --ISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRY 144
             +     LD ET + Y   +  T    T  A V+I+V++VND  PRF Y
Sbjct: 844 CELRTQMELDRETVERYLLNITVTAGAQTDYALVSITVLDVNDNVPRFVY 893


>gi|327270451|ref|XP_003220003.1| PREDICTED: protocadherin beta-16-like [Anolis carolinensis]
          Length = 809

 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 50/152 (32%), Positives = 78/152 (51%), Gaps = 16/152 (10%)

Query: 92  SRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYE 148
           S  G++  ++ LDYE    +R TV ATD+    +++ A ++++V++ ND  P F YP   
Sbjct: 505 SETGNMYALRSLDYEKIKDFRATVRATDSGTPTLSSDAIIHVTVIDENDNAPFFLYP--- 561

Query: 149 LFLPHIPLADLTP-----GSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-DSGHI 199
           L     P  +L P     G +I KV A DGD G    LS   L+     +FSI   +G +
Sbjct: 562 LQNNTSPCNELLPKMTEAGYLITKVVAVDGDSGQNSWLSYELLKATDPGLFSIGAQNGEV 621

Query: 200 SIVD-LSALNTSTIQLVVVATDTGNPPRQASV 230
                L+  +TS  +LV+V  D G PP+ ++ 
Sbjct: 622 KTRRPLTERDTSKQKLVIVVRDNGVPPQSSTA 653



 Score = 43.9 bits (102), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 38/138 (27%), Positives = 75/138 (54%), Gaps = 16/138 (11%)

Query: 96  DISLMQCLDYETEDSYRFTVYATDTLM---TTSATVNISVVNVNDWDPRFRYPQYELFLP 152
           D+ L + LD E +  +  T+ A D  +   T +A ++I ++++ND  P+F   +Y+    
Sbjct: 189 DLILEKPLDREQDSHFGLTLTAVDGGIPRRTGTAQIHIKILDINDNSPQFTQSEYK---- 244

Query: 153 HIPLADLTP-GSVIGKVEAADGDKGDRVTLSL---RGPYE--KMFSIND-SGHISIV-DL 204
            + L + +P G++I +VEA D D G    ++    R P +  K+F +N+ SG I+++ ++
Sbjct: 245 -VRLKENSPQGTLITRVEAKDLDFGSNALITYSFHRVPEKIYKLFHLNEVSGEITVLGEI 303

Query: 205 SALNTSTIQLVVVATDTG 222
                ++  + + ATD G
Sbjct: 304 DYEKETSYAMNIKATDGG 321


>gi|307178971|gb|EFN67487.1| Cadherin-87A [Camponotus floridanus]
          Length = 1772

 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 69/241 (28%), Positives = 107/241 (44%), Gaps = 44/241 (18%)

Query: 11  ITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTN 70
           I LVV    + N    + AT+ +S    +     FS   Y+ +  E       ++T+T  
Sbjct: 351 IILVVAEEVHTNPKLSSTATVTISITDANDNAPSFSNPTYTATVSETAVPGSPIITITA- 409

Query: 71  KPRD------LRVKYWLSNDYGERFSISRQ-GDISLMQC--------LDYETEDSYRFTV 115
           K RD        + Y L     E F+I ++ G I++  C        LDYE +  Y  T 
Sbjct: 410 KDRDSGRFGTTGIVYQLLGQGAEHFAIDKKTGTITVAPCPTPGTSPCLDYEQQMEYFLTY 469

Query: 116 YATD---TLMTTSATVNISVVNVNDWDPRFRYPQY--------ELFLPHIPLADLTPGSV 164
            ATD      TTS ++ IS+V+ ND  PRF   +Y        E F P +          
Sbjct: 470 KATDDNGEGQTTSVSLRISLVDANDSPPRFLQDKYRAVVDEGAEKFEPEL---------- 519

Query: 165 IGKVEAADGDKGDRVTLSLRGPYE-KMFSIN-DSGHISI---VDLSALNTSTIQLVVVAT 219
             KV+A D DK  ++T +L G  E  +F+++ D+G I++   VD++      I L + A+
Sbjct: 520 --KVQARDKDKTSKITYALVGGNELGLFAVDPDTGEITVKSPVDMTNATHDWIALTIQAS 577

Query: 220 D 220
           D
Sbjct: 578 D 578



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 48/148 (32%), Positives = 78/148 (52%), Gaps = 15/148 (10%)

Query: 95   GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFL 151
            G +   Q +DYE      FTV A D+    ++T+A V ++V+NVND DP+F    Y + +
Sbjct: 882  GIVRTSQVIDYEETKQLEFTVVAYDSGVPQLSTAAKVIVTVINVNDQDPKFEKELYNVSV 941

Query: 152  PHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSI-NDSGHISIVDLSALN 208
                  +  PG+ +  V+A DGD+G    VT SL G +   F+I +++G I++   + L+
Sbjct: 942  KE----NSPPGTHVTVVKATDGDEGPFGDVTYSLIGEHAADFNIGHETGEITVGGATVLD 997

Query: 209  TS---TIQLVVVATDTG--NPPRQASVP 231
                  I + V+A+D    N  R  +VP
Sbjct: 998  REMMPEITITVMASDGAHVNSRRSTAVP 1025



 Score = 45.1 bits (105), Expect = 0.052,   Method: Compositional matrix adjust.
 Identities = 57/199 (28%), Positives = 87/199 (43%), Gaps = 19/199 (9%)

Query: 45   FSKNEYSVSALENLPVNY---VLLTVTTNKPRDLRVKYW---LSNDYGERFSISRQGDIS 98
            FS++ Y  S  ENL VN    +L     ++      + W   ++ +  E FS++R+  I 
Sbjct: 1040 FSQHSYRASVAENLSVNPPAPILQVRAVDQDEGTNGEVWYTIINGNENESFSLNRETGIL 1099

Query: 99   LMQCLDYETEDSYRFTVYATDTL----MTTSATVNISVVNVNDWDPRFRYPQYELFLPHI 154
                       SYR  V A D       +    V+I V  VN   P+F  P+       +
Sbjct: 1100 YPAAALLGRAGSYRIEVEARDGAGNGPHSDKCYVDIRVTPVNQHKPQFVMPELTNATVEV 1159

Query: 155  PLADLTPGSVIGKVEAADGDKGD--RVTLSL----RGPYE-KMFSIN-DSGHI-SIVDLS 205
            P     P  +I  V+A D D G+  RV+  L    R   E + FSI+ ++G + S + L 
Sbjct: 1160 PENAGVPNYLILTVKAIDRDPGENGRVSYHLKVGNRNVQETEEFSIDQETGELRSKIILD 1219

Query: 206  ALNTSTIQLVVVATDTGNP 224
                S  +LV+VA D G+P
Sbjct: 1220 REIKSKFELVLVAADHGSP 1238



 Score = 45.1 bits (105), Expect = 0.056,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 69/138 (50%), Gaps = 14/138 (10%)

Query: 95  GDISLMQCLDY--ETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLP 152
           G+I++   +D    T D    T+ A+D +   SA VNI+V +VN+  P F +  Y     
Sbjct: 552 GEITVKSPVDMTNATHDWIALTIQASDGIFVDSALVNITVRDVNNNAPVFPHDIYTA--- 608

Query: 153 HIPLADLTP-GSVIGKVEAADGDKGDRVTLSLR---GPYEKMFSINDSGHISIVD--LSA 206
              +A+++P G+V+ +V A D D G    L  R   G ++  F++N++  +  V   L  
Sbjct: 609 --SIAEISPIGTVVEEVTATDADSGVNAELVYRIQKGAFDD-FAVNETSGVVTVSRKLDY 665

Query: 207 LNTSTIQLVVVATDTGNP 224
              +T  + V+A D G P
Sbjct: 666 DEKNTYHVEVIAFDKGTP 683


>gi|195389344|ref|XP_002053337.1| GJ23394 [Drosophila virilis]
 gi|194151423|gb|EDW66857.1| GJ23394 [Drosophila virilis]
          Length = 1972

 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 59/193 (30%), Positives = 97/193 (50%), Gaps = 20/193 (10%)

Query: 55   LENLPVNYVLLTVTTNKPRDLRVKYWL-SNDYGERFSISRQ-GDISLMQCLDYETEDSYR 112
            +E  PV  VL T+  +       ++ + SNDY   F+I++  G I     LDYE     +
Sbjct: 1008 VEEQPVGTVLTTLQASDEDSSIGEFNITSNDY---FAINQTTGVIYTTARLDYEAVKEVK 1064

Query: 113  FTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTP-GSVIGKV 168
            F    +DT    +T +A + + ++N+ND +P F + +Y     +  + + +P G+V GKV
Sbjct: 1065 FMATVSDTGVPPLTATADIVVDIINLNDNEPHFTHSEY-----YFNITENSPRGTVAGKV 1119

Query: 169  EAADGDKG--DRVTLSLRGPYEKMFSIND-SGHISIVDLSALNTSTIQ---LVVVATDTG 222
            EA D D G    +T +L G   K FSI+  +G++ + + S L+   ++   L VVA D  
Sbjct: 1120 EAHDIDVGAFGELTYTLIGENNKYFSIDAYTGNVMVANASILDREQLKELTLSVVAQDKA 1179

Query: 223  NPPRQASVPAIMH 235
                Q S  A +H
Sbjct: 1180 PATVQKSATATIH 1192



 Score = 46.6 bits (109), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 62/226 (27%), Positives = 100/226 (44%), Gaps = 42/226 (18%)

Query: 11  ITLVVRAIQY----DNQDRYALATLIVSKAGTSLRELQ-----FSKNEYSVSALENLPVN 61
           I L++RA +      N D    AT   ++A  ++R++      F+K EY VS LEN P  
Sbjct: 318 IQLMIRARELVNGVPNDDPLTSAT---ARATVTIRDVNDSPPTFNKKEYEVSLLENTPEG 374

Query: 62  YVLLTVTTNKPRDLRV--KYWLS-NDYGERFSIS-------RQGDISLMQ-CLDYETEDS 110
             L    +    D+ +  K+ L   D    F +         Q +I +    LDYE  + 
Sbjct: 375 TPLALDMSVSDADVGINSKFALRLEDVSGVFDVEPKLVTGYSQVNIRVANGTLDYENPNQ 434

Query: 111 YRFTVYA------TDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSV 164
            +F V        T+  ++++AT+ +SV++ ND  P F    Y   +    L    PG  
Sbjct: 435 RKFIVLVIAEETDTEPKLSSTATITVSVLDANDNKPNFEQESYSAAVSEAAL----PGQY 490

Query: 165 IGKVEAAD------GDKGDRVTLSLRGPYEKMFSIND-SGHISIVD 203
           I  + A D      GD G R +LS  G   ++F +N+ +G I++ D
Sbjct: 491 ITTITAKDVDSSSFGDAGIRYSLS--GTGAELFHVNEQTGVITLGD 534



 Score = 38.5 bits (88), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 29/105 (27%), Positives = 48/105 (45%), Gaps = 7/105 (6%)

Query: 45  FSKNEYSVSALENLPVNYV---LLTVTTNKPRDLRVKYWLSNDYGERFSI-SRQGDISLM 100
           F +  YS    EN  +      L     +  ++  ++Y +       F I  R G++ + 
Sbjct: 768 FQQQNYSAIVEENSEIGTSVERLQATDLDTGKNAELRYRIQQGSFNDFDIDERTGEVFVS 827

Query: 101 QCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRF 142
           + LDY+  ++Y   V A D     +T +AT+ I+V N ND DP F
Sbjct: 828 RKLDYDRRNTYHLQVQAADQGTPSLTGTATLTINVQNSNDKDPYF 872



 Score = 38.1 bits (87), Expect = 7.2,   Method: Compositional matrix adjust.
 Identities = 39/134 (29%), Positives = 60/134 (44%), Gaps = 23/134 (17%)

Query: 102 CLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLAD 158
           CLDYE+E +Y  +  ATD      T+  ++ ISV + ND  P    P Y         A 
Sbjct: 620 CLDYESETTYFLSYKATDDNGQGQTSVVSLRISVSDANDSPPICESPLYR--------AS 671

Query: 159 LTPGSVIGK----VEAADGDKGDRVTLSLRGP--YEKMFSIND-SGHISI-----VDLSA 206
           +  G+ +      ++A D D    ++  + G    E +F I   SG ISI     +D++ 
Sbjct: 672 VDEGAFVFDSPLVIKARDADTMSSISYRIIGSPQIESIFDIGKRSGQISIRPNASLDVTN 731

Query: 207 LNTSTIQLVVVATD 220
           L +  +  VV A D
Sbjct: 732 LKSEQLIFVVEAND 745


>gi|119623182|gb|EAX02777.1| hCG1797565, isoform CRA_a [Homo sapiens]
          Length = 1021

 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 76/274 (27%), Positives = 119/274 (43%), Gaps = 40/274 (14%)

Query: 45  FSKNEYSVSALENLPVNYV--LLTVTTNKPRDLRVKYWLSNDYGERFSISRQ-GDISLMQ 101
           F+ NEY     ENLP +    L+TVT     D         D  + F+I  Q G I    
Sbjct: 570 FTHNEYKFYVPENLPRHGTVGLITVTDPDYGDNSAVTLSILDENDDFTIDSQTGVIRPNI 629

Query: 102 CLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYP----QYELFLPHI 154
             D E ++SY F V A D      ++SA V I+VV+VND  P F  P     YEL LP  
Sbjct: 630 SFDREKQESYTFYVKAEDGGRVSRSSSAKVTINVVDVNDNKPVFIVPPSNCSYELVLPST 689

Query: 155 PLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-DSGHISIVDLSALNTS 210
                 PG+V+ +V A D D G    +    + G    +F+I+ ++G+I++++   +   
Sbjct: 690 -----NPGTVVFQVIAVDNDTGMNAEVRYSIVGGNTRDLFAIDQETGNITLMEKCDVTDL 744

Query: 211 TIQLVVV-ATDTGNPPRQASVPAIMHFPEAIVQQAS--------------------SKLN 249
            +  V+V A D G P    SV  +  F    V  A+                    + ++
Sbjct: 745 GLHRVLVKANDLGQPDSLFSVVIVNLFVNESVTNATLINELVRKSTEAPVTPNTEIADVS 804

Query: 250 SGTSSTVLIILGVVLIVLGFVIILLILYIHKNKH 283
           S TS  V I++  V   +  V+++ I  + + + 
Sbjct: 805 SPTSDYVKILVAAVAGTITVVVVIFITAVVRCRQ 838



 Score = 58.5 bits (140), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 37/114 (32%), Positives = 62/114 (54%), Gaps = 10/114 (8%)

Query: 76  RVKYWLSNDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNIS 131
           ++ Y L  D    FS+  R G +++++ LD E ED Y FT+ A D     +T++ TV +S
Sbjct: 500 KINYLLGPDAPPEFSLDCRTGMLTVVKKLDREKEDKYLFTILAKDNGVPPLTSNVTVFVS 559

Query: 132 VVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDR--VTLSL 183
           +++ ND  P F + +Y+ ++P     +L     +G +   D D GD   VTLS+
Sbjct: 560 IIDQNDNSPVFTHNEYKFYVPE----NLPRHGTVGLITVTDPDYGDNSAVTLSI 609



 Score = 38.1 bits (87), Expect = 7.6,   Method: Compositional matrix adjust.
 Identities = 36/139 (25%), Positives = 67/139 (48%), Gaps = 15/139 (10%)

Query: 103 LDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADL 159
           LD E +D+Y   V   D      +++A + +SV + ND  P F+  + E+ +P     + 
Sbjct: 207 LDREEKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVFKETEIEVSIPE----NA 262

Query: 160 TPGSVIGKVEAADGDKGDRVTLS------LRGPYEKMFSIN-DSGHISIVD-LSALNTST 211
             G+ + ++ A D D G+   +       +     ++F +N  +G I+I + L    T  
Sbjct: 263 PVGTSVTQLHATDADIGENAKIHFSFSNLVSNIARRLFHLNATTGLITIKEPLDREETPN 322

Query: 212 IQLVVVATDTGNPPRQASV 230
            +L+V+A+D G  P +A V
Sbjct: 323 HKLLVLASDGGLMPARAMV 341


>gi|327271397|ref|XP_003220474.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 2-like
           [Anolis carolinensis]
          Length = 2944

 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 65/217 (29%), Positives = 101/217 (46%), Gaps = 20/217 (9%)

Query: 25  RYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWL 81
           R A+ATL V+ A T+  +  F + EY  S  ENL V Y +LTV     +   +  + Y L
Sbjct: 273 RTAMATLSVTVADTNDHDPVFEQQEYKESMRENLEVGYEVLTVRATDGDASPNANILYHL 332

Query: 82  SNDYG--ERFSIS-RQGDISLMQCLDYETEDSYRFTVYATDTL-----MTTSATVNISVV 133
            N  G  + F I  + G I     +D E  +SY+  V A D        +T+AT++I+V 
Sbjct: 333 LNGRGVNKIFEIDPKSGVIRTNGLVDREAVESYQLIVEANDQGRDPGPRSTTATIHITVE 392

Query: 134 NVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKM 190
           + ND  P+F   +Y + +P     ++   + + +V A D DKG    +    + G     
Sbjct: 393 DDNDNSPQFSEKRYVVQVPE----NVASNTHVLRVNATDRDKGSNALVHYSIMSGNTRGQ 448

Query: 191 FSIN-DSGHISIV-DLSALNTSTIQLVVVATDTGNPP 225
           F I+  +G+I +V  L         L + A D G PP
Sbjct: 449 FYIDAQTGNIDVVSQLDYEMNKEYSLRIRAQDGGRPP 485



 Score = 58.5 bits (140), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 65/212 (30%), Positives = 97/212 (45%), Gaps = 27/212 (12%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTTNKPRDL---RVKYWLSNDYGER----FSIS-RQG 95
           QF    Y VS  EN P    ++ +    P +    R+ Y +   +  R    F+I  R G
Sbjct: 184 QFQAPTYQVSVPENRPAGTPVIMLKAVDPDEGEWGRLDYSMDALFDSRSNSFFAIDPRSG 243

Query: 96  DISLMQCLDYETEDSYRFTVYATDTLM---TTSATVNISVVNVNDWDPRFRYPQYELFLP 152
            ++  + LD ET+ S+ F V ATD  +   T  AT++++V + ND DP F   +Y+  + 
Sbjct: 244 AVTTAEELDRETKSSHVFRVTATDHGVPRRTAMATLSVTVADTNDHDPVFEQQEYKESMR 303

Query: 153 HIPLADLTPGSVIGKVEAADGDKGDRVT-----LSLRGPYEKMFSIN-DSGHI---SIVD 203
                +L  G  +  V A DGD           L+ RG   K+F I+  SG I    +VD
Sbjct: 304 E----NLEVGYEVLTVRATDGDASPNANILYHLLNGRG-VNKIFEIDPKSGVIRTNGLVD 358

Query: 204 LSALNTSTIQLVVVATDTGNPPRQASVPAIMH 235
             A+   + QL+V A D G  P   S  A +H
Sbjct: 359 REAV--ESYQLIVEANDQGRDPGPRSTTATIH 388



 Score = 51.6 bits (122), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 53/192 (27%), Positives = 92/192 (47%), Gaps = 14/192 (7%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLR--VKYWLSN-DYGERFSISRQ---GDI 97
           +F++ EYS+   E+  V   +LTV+    RD+   + Y ++N +   RFSI+ Q   G I
Sbjct: 611 EFTQKEYSMRLNEDAAVGTSVLTVSAID-RDVNSVITYQITNGNTRNRFSITSQSGGGLI 669

Query: 98  SLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLA 157
           +L   LDY+ E  Y  T+ A+D     +A V ++V + N   P F+   Y + +      
Sbjct: 670 TLALPLDYKLERHYLLTITASDGTRLDTAQVFVNVTDANTHRPVFQSSHYTVNINE---- 725

Query: 158 DLTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSINDSGHISI-VDLSALNTSTIQL 214
           D   G+ +  + A D D G+  R+T  +     +     D+G ++  +DL   +  +  L
Sbjct: 726 DRPVGTTVVIISATDEDTGENARITYFMEDSIPQFKIDMDTGAVTTQMDLDYEDQVSYTL 785

Query: 215 VVVATDTGNPPR 226
            + A D G P +
Sbjct: 786 AITARDNGIPQK 797



 Score = 51.6 bits (122), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 51/172 (29%), Positives = 82/172 (47%), Gaps = 17/172 (9%)

Query: 45  FSKNEYSVSALENLPVNYVLL---TVTTNKPRDLRVKYWL---SNDYGERFSISRQ-GDI 97
           F    +  + LEN+PV Y ++    +  +   + R++Y L   S+D+   FSI+   G I
Sbjct: 507 FVSTPFQSTVLENVPVGYSVIHIQAIDADSGENARLEYALVDISSDF--PFSINNNTGWI 564

Query: 98  SLMQCLDYETEDSYRFTVYATDTL---MTTSATVNISVVNVNDWDPRFRYPQYELFLPHI 154
            +   LD E  D Y F V A D     MT+SA+V+I++++VND +P F   +Y + L   
Sbjct: 565 LVASELDRENVDFYNFGVEARDHGNPPMTSSASVSITILDVNDNNPEFTQKEYSMRLNE- 623

Query: 155 PLADLTPGSVIGKVEAADGDKGDRVTLSL-RGPYEKMFSINDSGHISIVDLS 205
              D   G+ +  V A D D    +T  +  G     FSI       ++ L+
Sbjct: 624 ---DAAVGTSVLTVSAIDRDVNSVITYQITNGNTRNRFSITSQSGGGLITLA 672



 Score = 46.2 bits (108), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 41/160 (25%), Positives = 79/160 (49%), Gaps = 10/160 (6%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWL-SNDYGERFSIS-RQGDISL 99
            F ++E+ +   EN P+  V+  +T + P +    ++ Y +   +  E F +    G+++ 
Sbjct: 923  FEQDEFDIFVEENSPIGLVVARITASDPDEGTNAQIMYQIVEGNIPEVFQLDIFSGELTA 982

Query: 100  MQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPH--IPLA 157
            +  LDYET+  Y   V AT   + + ATV++ + + ND  P  +   +E+   +     +
Sbjct: 983  LMDLDYETKSEYVIVVQATSAPLVSRATVHVRLRDKNDNIPILK--NFEIIFNNYITNRS 1040

Query: 158  DLTPGSVIGKVEAADGDKGDRVTLSL-RGPYEKMFSINDS 196
               P  VIG++ A+D D  D ++ S  +G   K+  +N S
Sbjct: 1041 SSFPTGVIGRIPASDPDVSDTLSYSFEQGNELKLVLLNHS 1080


>gi|41223264|emb|CAD92431.1| protocadherin [Homo sapiens]
          Length = 831

 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 76/274 (27%), Positives = 119/274 (43%), Gaps = 40/274 (14%)

Query: 45  FSKNEYSVSALENLPVNYV--LLTVTTNKPRDLRVKYWLSNDYGERFSISRQ-GDISLMQ 101
           F+ NEY     ENLP +    L+TVT     D         D  + F+I  Q G I    
Sbjct: 390 FTHNEYKFYVPENLPRHGTVGLITVTDPDYGDNSAVTLSILDENDDFTIDSQTGVIRPNI 449

Query: 102 CLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYP----QYELFLPHI 154
             D E ++SY F V A D      ++SA V I+VV+VND  P F  P     YEL LP  
Sbjct: 450 SFDREKQESYTFYVKAEDGGRVSRSSSAKVTINVVDVNDNKPVFIVPPYNYSYELVLPST 509

Query: 155 PLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-DSGHISIVDLSALNTS 210
                 PG+V+ +V A D D G    +    + G    +F+I+ ++G+I++++   +   
Sbjct: 510 -----NPGTVVFQVIAVDNDTGMNAEVRYSIVGGNTRDLFAIDQETGNITLMEKCDVTDL 564

Query: 211 TIQLVVV-ATDTGNPPRQASVPAIMHFPEAIVQQAS--------------------SKLN 249
            +  V+V A D G P    SV  +  F    V  A+                    + ++
Sbjct: 565 GLHRVLVKANDLGQPDSLFSVVIVNLFVNESVTNATLINELVRKSIEAPVTPNTEIADVS 624

Query: 250 SGTSSTVLIILGVVLIVLGFVIILLILYIHKNKH 283
           S TS  V I++  V   +  V+++ I  + + + 
Sbjct: 625 SPTSDYVKILVAAVAGTITVVVVIFITAVVRCRQ 658



 Score = 58.5 bits (140), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 37/114 (32%), Positives = 62/114 (54%), Gaps = 10/114 (8%)

Query: 76  RVKYWLSNDYGERFSISRQ-GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNIS 131
            + Y L  D    FS+ R+ G +++++ LD E ED Y FT+ A D     +T++ TV +S
Sbjct: 320 EINYLLGPDAPPEFSLDRRTGMLTVVKKLDREKEDKYLFTILAKDNGVPPLTSNVTVFVS 379

Query: 132 VVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDR--VTLSL 183
           +++ ND  P F + +Y+ ++P     +L     +G +   D D GD   VTLS+
Sbjct: 380 IIDQNDNSPVFTHNEYKFYVPE----NLPRHGTVGLITVTDPDYGDNSAVTLSI 429



 Score = 37.7 bits (86), Expect = 8.9,   Method: Compositional matrix adjust.
 Identities = 36/139 (25%), Positives = 67/139 (48%), Gaps = 15/139 (10%)

Query: 103 LDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADL 159
           LD E +D+Y   V   D      +++A + +SV + ND  P F+  + E+ +P     + 
Sbjct: 27  LDREEKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVFKETEIEVSIPE----NA 82

Query: 160 TPGSVIGKVEAADGDKGDRVTLS------LRGPYEKMFSIN-DSGHISIVD-LSALNTST 211
             G+ + ++ A D D G+   +       +     ++F +N  +G I+I + L    T  
Sbjct: 83  PVGTSVTQLHATDADIGENAKIHFSFSNLVSNIARRLFHLNATTGLITIKEPLDREETPN 142

Query: 212 IQLVVVATDTGNPPRQASV 230
            +L+V+A+D G  P +A V
Sbjct: 143 HKLLVLASDGGLMPARAMV 161


>gi|410973091|ref|XP_003992989.1| PREDICTED: protocadherin-16 [Felis catus]
          Length = 3298

 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 62/191 (32%), Positives = 96/191 (50%), Gaps = 21/191 (10%)

Query: 56  ENLPVNYVLLTVTTNKPRDLRVKYW-LSNDYGE-RFSISRQGDISLMQC----LDYETED 109
           E  P   ++  ++ + P D    +  +S + GE  F++S Q  +  + C    LD E  D
Sbjct: 376 EAAPPGQLVARISVSDPDDGDFAHVNVSLEGGEGHFALSTQDSVIYLVCVARQLDREERD 435

Query: 110 SYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLT-PGSVI 165
           +Y   V ATD+    +   AT  + V +VND  P F     +L+ P  PL ++  PGS +
Sbjct: 436 AYNLRVTATDSGSPPLRAEATFVLHVTDVNDNAPTF---DRQLYRPE-PLPEVALPGSFV 491

Query: 166 GKVEAADGDKG--DRVTLSLR-GPYEKMFSINDSGHISIVDLSALN---TSTIQLVVVAT 219
            +V A D D+G   +VT SL  G + + FSI+ +  I I   ++L+       QL+VVAT
Sbjct: 492 VRVTARDPDQGTNGQVTYSLAPGAHTRWFSIDPTSGI-ITTAASLDYELEPQPQLIVVAT 550

Query: 220 DTGNPPRQASV 230
           D G PP  +S 
Sbjct: 551 DGGLPPLASSA 561



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 57/197 (28%), Positives = 84/197 (42%), Gaps = 12/197 (6%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKP---RDLRVKYWLSNDYGERFSIS-RQGDISLM 100
            F    YSV   E+ P   +LL +  + P    + RV Y+L       F +    G++   
Sbjct: 1854 FPVPAYSVEVPEDAPAGTLLLQLQAHDPDAGANGRVTYYLGTGAAGAFLLEPSSGELRTA 1913

Query: 101  QCLDYETEDSYRFTVYATDTL----MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
              LD E   SY F+V A D      ++T+  V I+V +VND  P F      L LP    
Sbjct: 1914 TVLDREQCPSYAFSVSAVDGAAAGPLSTTVPVTITVRDVNDHAPTFPTSPLRLRLPRPGP 1973

Query: 157  ADLTPGSVIGKVEAADGDKGDRVTL--SLRGPYEKMFSIND-SGHISIVDLS-ALNTSTI 212
            +  TP   +  + A D D G   ++   L G      +++  +G I +     AL     
Sbjct: 1974 SLSTPTLPLATLRAEDRDAGANASILYRLAGTPPPGTTVDSYTGEIRVARSPVALGPRDR 2033

Query: 213  QLVVVATDTGNPPRQAS 229
             L +VATD G P R A+
Sbjct: 2034 VLFIVATDLGRPARSAT 2050



 Score = 54.7 bits (130), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 57/182 (31%), Positives = 80/182 (43%), Gaps = 28/182 (15%)

Query: 64   LLTVTTNKPRDLRVKYWLSNDY-GERFSISRQ-GDISLMQCLDYETEDSYRFTVYATDT- 120
            +L V    P    + Y L+ D     F +  Q G + +   LD E ++ Y   V A    
Sbjct: 1018 VLQVQAQAPDGGPITYHLAADGPSSPFGLEPQSGWLWVRAALDREAQELYTLKVMAVSGS 1077

Query: 121  -----LMTTSATVNISVVNVNDWDPRF-RYPQYELFLPHIPLADLTPGSVIGKVEAADGD 174
                   T +ATV +S++N ND  PR    P +     + P     PG+ +G+V A D D
Sbjct: 1078 KAELGQQTGTATVRVSILNQNDHSPRLSEEPTFLAVAENQP-----PGTSVGRVFATDRD 1132

Query: 175  KG--DRVTLSLRGPYE--KMFSINDSGHISIVDLSALNT------STIQLVVVATDTGNP 224
             G   R+T SLR   E  K F I    H    +++ L T      S+ QL+V   D GNP
Sbjct: 1133 SGPNGRLTYSLRQLSEDSKAFRI----HPQTGEMTTLQTLDRERQSSYQLLVQVQDGGNP 1188

Query: 225  PR 226
            PR
Sbjct: 1189 PR 1190



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 69/255 (27%), Positives = 105/255 (41%), Gaps = 44/255 (17%)

Query: 11   ITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTN 70
            + +V+ A  +    R A AT+ V     +     F+   Y V+  E+LP    LLT+   
Sbjct: 2447 VDVVLEARDHGMPGRAARATVHVQLQDQNDHTPSFTLPHYRVAVTEDLPPGSTLLTLEAT 2506

Query: 71   KPRDLR----VKYWL-SNDYGERFSISRQ---------------GDISLMQCLDYETEDS 110
                 R    V Y + S + G  F +  +               G + L++ LD+E+   
Sbjct: 2507 DADGSRAHATVDYSIVSGNRGRVFQLEPRLAEAGEGGGLGPRALGCLVLLESLDFESLTQ 2566

Query: 111  YRFTVYATDTLM---TTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGK 167
            Y  TV A D      +++  V ++V++VND  P F    Y + +P     D   G  +  
Sbjct: 2567 YNLTVAAADRGQPPRSSAVPVTVTVLDVNDNPPVFTQASYRMAVPE----DTPIGVELLH 2622

Query: 168  VEAADGDKGD----RVTLSLRGPYEKMFSIND-SGHISIVD-LSALNTSTIQLVVVATDT 221
            VEA+D D G     R TLS   P   +F +++ SG + +   L     S  QLVV A D 
Sbjct: 2623 VEASDADPGPHGLVRFTLSSGDP-SGLFELDESSGALRLAHPLDCETQSRHQLVVQAAD- 2680

Query: 222  GNPPRQASVPAIMHF 236
                     PA  HF
Sbjct: 2681 ---------PAGTHF 2686



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 61/197 (30%), Positives = 91/197 (46%), Gaps = 24/197 (12%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNK----PRDLRVKYWLSN-DYGERFSISRQ-GDIS 98
            F++  Y ++  E+ P+   LL V  +     P  L V++ LS+ D    F +    G + 
Sbjct: 2601 FTQASYRMAVPEDTPIGVELLHVEASDADPGPHGL-VRFTLSSGDPSGLFELDESSGALR 2659

Query: 99   LMQCLDYETEDSYRFTVYATDTLMT--TSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
            L   LD ET+  ++  V A D   T    A V I V +VND  P F      L L    L
Sbjct: 2660 LAHPLDCETQSRHQLVVQAADPAGTHFALAPVTIEVQDVNDHGPVF-----PLSLLSTSL 2714

Query: 157  AD-LTPGSVIGKVEAADGDKGD----RVTLSLRGP---YEKMFSINDS-GHI-SIVDLSA 206
            A+   PG+++  + A DGD G     R +L   GP     + F++N S G + + V    
Sbjct: 2715 AENQPPGTLVTTLHAIDGDAGAFGRLRYSLLEAGPGPEGREAFALNSSTGELRARVAFDY 2774

Query: 207  LNTSTIQLVVVATDTGN 223
             +T + QL+V A D GN
Sbjct: 2775 EHTGSFQLLVGAADAGN 2791



 Score = 52.0 bits (123), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 69/252 (27%), Positives = 121/252 (48%), Gaps = 37/252 (14%)

Query: 14   VVRAIQYDNQDRYALATLIVS--------KAGTS-LRELQFSKNEYS---------VSAL 55
            V  A+  + Q+ Y L  + VS        + GT+ +R    ++N++S         ++  
Sbjct: 1055 VRAALDREAQELYTLKVMAVSGSKAELGQQTGTATVRVSILNQNDHSPRLSEEPTFLAVA 1114

Query: 56   ENLP----VNYVLLTVTTNKPRDLRVKYWLS--NDYGERFSISRQ-GDISLMQCLDYETE 108
            EN P    V  V  T   + P   R+ Y L   ++  + F I  Q G+++ +Q LD E +
Sbjct: 1115 ENQPPGTSVGRVFATDRDSGPNG-RLTYSLRQLSEDSKAFRIHPQTGEMTTLQTLDRERQ 1173

Query: 109  DSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYEL--FLPHIPLAD-LTPG 162
             SY+  V   D      +T+ TV+I+V+++ND  P F          LP I + D + PG
Sbjct: 1174 SSYQLLVQVQDGGNPPRSTTGTVHIAVLDLNDNSPTFLQASGAAGGGLP-IQVPDRVPPG 1232

Query: 163  SVIGKVEAADGDKGDRVTL--SLRGPYEKMFSINDS-GH-ISIVDLSALNTSTIQLVVVA 218
            +++  ++A D D+G+  T+  +L GP  ++FS++   G  ++   L         L + A
Sbjct: 1233 TLVTTLQAKDPDEGENGTILYTLTGPGSELFSLHPHLGELLTAAPLIRAERPHYVLTLSA 1292

Query: 219  TDTGNPPRQASV 230
             D G+PPR +S+
Sbjct: 1293 HDQGSPPRSSSL 1304



 Score = 51.6 bits (122), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 50/149 (33%), Positives = 66/149 (44%), Gaps = 15/149 (10%)

Query: 89   FSISRQGD-ISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQY 147
            FSI R G  +SL   LD+E  D Y   + A D      A + + V +VND  P F    Y
Sbjct: 2321 FSIGRYGGRLSLTGPLDFEQRDRYHLQLLAHDGPHEGHANLTVFVEDVNDNAPAFSQSLY 2380

Query: 148  EL-FLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSI--NDSGHISIV 202
            ++  L H P     PGS I  V A D D G    ++  L  P E  FS+  N+    + V
Sbjct: 2381 QVTLLEHTP-----PGSAILSVSATDQDSGANGHISYHLASPAEG-FSVDPNNGTLFTTV 2434

Query: 203  DLSAL---NTSTIQLVVVATDTGNPPRQA 228
               AL       + +V+ A D G P R A
Sbjct: 2435 GTMALGHEGPGVVDVVLEARDHGMPGRAA 2463



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 44/136 (32%), Positives = 63/136 (46%), Gaps = 7/136 (5%)

Query: 13   LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKP 72
            L V A  + +  R A   L VS A  +     F + EYSV   EN P    LLT+    P
Sbjct: 1616 LTVVASDHGSPPRSATQLLTVSVADVNDEAPAFQQQEYSVLLRENSPPGTSLLTLRATDP 1675

Query: 73   RDLRVKYWLSND--YGERFSISRQ-GDISLMQCLDYETEDSYRFTVYATD---TLMTTSA 126
             DL     ++     GE FS+  + G ++ ++ LD E ++    TVYA D     + T  
Sbjct: 1676 -DLGANGQVTYGGISGESFSLDPETGVLTTLRALDREEQEEINLTVYARDRGSPPLLTHV 1734

Query: 127  TVNISVVNVNDWDPRF 142
            TV ++V + ND  P F
Sbjct: 1735 TVRVAVEDENDHAPTF 1750



 Score = 46.2 bits (108), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 43/127 (33%), Positives = 63/127 (49%), Gaps = 13/127 (10%)

Query: 58  LPVNYVLLTVTTNKP---RDLRVKYWLSNDYGER-FSIS-RQGDISLMQCLDYETEDSYR 112
           LP ++V+  VT   P    + +V Y L+     R FSI    G I+    LDYE E   +
Sbjct: 486 LPGSFVV-RVTARDPDQGTNGQVTYSLAPGAHTRWFSIDPTSGIITTAASLDYELEPQPQ 544

Query: 113 FTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVE 169
             V ATD     + +SATV++++ +VND +P+F+   Y   LP        PG+   +V 
Sbjct: 545 LIVVATDGGLPPLASSATVSVALQDVNDNEPQFQRTFYNASLPE----GTQPGTCFLQVT 600

Query: 170 AADGDKG 176
           A D D G
Sbjct: 601 ATDADSG 607



 Score = 45.1 bits (105), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 58/198 (29%), Positives = 86/198 (43%), Gaps = 21/198 (10%)

Query: 42  ELQFSKNEYSVSALENLPVNYVLLTVTT----NKPRDLRVKYWLSNDYGER----FSISR 93
           E QF +  Y+ S  E        L VT     + P  L + Y L    G      F I  
Sbjct: 574 EPQFQRTFYNASLPEGTQPGTCFLQVTATDADSGPFGL-LSYSLGAGLGASGSPPFRIDA 632

Query: 94  Q-GDISLMQCLDY-ETEDSYRFTVYATDTLMTTSAT-VNISVVNVNDWDPRFRYPQYELF 150
           Q GD+   + LD  +   S+ FTV A D     S   V + V + ND  P+F   +Y   
Sbjct: 633 QSGDVCTTRILDRDQGPSSFDFTVTAVDGGGLKSMVYVKVFVSDENDNPPQFYPREYAAS 692

Query: 151 LPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIND-SGHISIV-DLS 205
           L     A  TPG+ + +V A D D+G    LS   L G    +F++++ SG +++   L+
Sbjct: 693 L----SAQSTPGTAVLRVRAHDPDQGPHGRLSYYILAGNNPPLFALDEHSGLLTVAWPLA 748

Query: 206 ALNTSTIQLVVVATDTGN 223
               + +QL + A D G 
Sbjct: 749 RRANAMVQLEIGAQDGGG 766



 Score = 44.3 bits (103), Expect = 0.095,   Method: Compositional matrix adjust.
 Identities = 54/218 (24%), Positives = 89/218 (40%), Gaps = 37/218 (16%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGERFSISRQGDISLM- 100
            FS++ Y V+ LE+ P    +L+V+    +   +  + Y L++   E FS+          
Sbjct: 2375 FSQSLYQVTLLEHTPPGSAILSVSATDQDSGANGHISYHLASP-AEGFSVDPNNGTLFTT 2433

Query: 101  ---QCLDYETEDSYRFTVYATDTLM---TTSATVNISVVNVNDWDPRFRYPQYELFLPHI 154
                 L +E        + A D  M      ATV++ + + ND  P F  P Y + +   
Sbjct: 2434 VGTMALGHEGPGVVDVVLEARDHGMPGRAARATVHVQLQDQNDHTPSFTLPHYRVAV--- 2490

Query: 155  PLADLTPGSVIGKVEAADGDKGDRVTLSL-----RGPYEKMFSINDSGHI---------- 199
               DL PGS +  +EA D D G R   ++      G   ++F +                
Sbjct: 2491 -TEDLPPGSTLLTLEATDAD-GSRAHATVDYSIVSGNRGRVFQLEPRLAEAGEGGGLGPR 2548

Query: 200  ---SIVDLSALNTSTI---QLVVVATDTGNPPRQASVP 231
                +V L +L+  ++    L V A D G PPR ++VP
Sbjct: 2549 ALGCLVLLESLDFESLTQYNLTVAAADRGQPPRSSAVP 2586



 Score = 42.0 bits (97), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 61/230 (26%), Positives = 99/230 (43%), Gaps = 28/230 (12%)

Query: 13   LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVT---- 68
            L + A       R A   +IV   G S R  +F +        EN P    +++      
Sbjct: 2035 LFIVATDLGRPARSATGVVIVGLQGESERGPRFPRASSEAMLRENAPPGTPIVSPKAVHA 2094

Query: 69   --TNKPRDLRVKYW-LSNDYGERFSIS-RQGDISL--MQCLDYETEDSYRFTVYATDTLM 122
              +N P    + Y  LS +    FSI    G I++   + LD+E     R  + A     
Sbjct: 2095 GGSNGP----ITYSILSGNERGTFSIQPSTGAITVRSAEGLDFEASPRLRLVLQAESGGA 2150

Query: 123  TTSATVNISVVNVNDWDPRFRYPQYELFLPHI-PLADLTPGSVIGKVEAADGDKG--DRV 179
               + + +++ + ND  PRF  P Y  FLP   PL     G ++ +VEA D D+G   ++
Sbjct: 2151 FAFSVLTLTLQDTNDNAPRFLRPHYVAFLPESRPLE----GPLL-QVEADDLDQGPSGQI 2205

Query: 180  TLSLRG--PYEKMFSINDSGHISIVDLSALNT---STIQLVVVATDTGNP 224
            + SL    P   +F + D    +I   + L+    +  +LV++ATD G+P
Sbjct: 2206 SYSLAASQPARGLFHV-DPATGTITTTAILDREIWAETRLVLMATDRGSP 2254



 Score = 41.2 bits (95), Expect = 0.75,   Method: Compositional matrix adjust.
 Identities = 27/94 (28%), Positives = 48/94 (51%), Gaps = 9/94 (9%)

Query: 95   GDISLMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFL 151
            G+   M+ LD E E +++  + A D     ++ +  V ++V++ ND  P F  P Y + +
Sbjct: 1804 GEFGTMRPLDREVEPAFQLQIEARDGGQPALSATLLVTVTVLDANDHAPAFPVPAYSVEV 1863

Query: 152  PHIPLADLTPGSVIGKVEAADGDKG--DRVTLSL 183
            P     D   G+++ +++A D D G   RVT  L
Sbjct: 1864 PE----DAPAGTLLLQLQAHDPDAGANGRVTYYL 1893



 Score = 38.9 bits (89), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 37/125 (29%), Positives = 58/125 (46%), Gaps = 14/125 (11%)

Query: 126 ATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSL 183
           A V + + +VND  P F  P+  + LP        PG+ I  + A D D G   RVT +L
Sbjct: 877 ARVRVLLDDVNDNSPAFPAPEDTVLLP----PSTAPGTPIYTLRALDPDAGVNGRVTFTL 932

Query: 184 RGPYEKMFSIND-SGHISIV-DLSALNTSTIQLVVVATDTGNPPRQASVPAIMHFPEAIV 241
                  F+++  +GH+ ++  L        +L + A D G+PPR +      HF   +V
Sbjct: 933 LAGGGGAFTVDPTTGHVRLMRPLGPPGGPAHELELEARDGGSPPRTS------HFRLRVV 986

Query: 242 QQASS 246
            Q S+
Sbjct: 987 VQDSA 991



 Score = 38.9 bits (89), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 45/163 (27%), Positives = 70/163 (42%), Gaps = 22/163 (13%)

Query: 89  FSI-SRQGDISLMQCLDYETEDSYRFTVYATDTLMTT---SATVNISVVNVNDWDPRFRY 144
           FSI +  G + L + LD+E    +   V A D        SA V + V + ND  P    
Sbjct: 304 FSIDAHTGLLRLERPLDFEQRRVHELVVQARDGGAHPELGSAFVTVHVRDANDNQPSMTV 363

Query: 145 PQYELFL-----PHIPLADLTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSINDSG 197
               +FL     P +  A   PG ++ ++  +D D GD   V +SL G  E  F+++   
Sbjct: 364 ----IFLSADGSPRVSEA-APPGQLVARISVSDPDDGDFAHVNVSLEG-GEGHFALSTQD 417

Query: 198 HISIV-----DLSALNTSTIQLVVVATDTGNPPRQASVPAIMH 235
            +  +      L         L V ATD+G+PP +A    ++H
Sbjct: 418 SVIYLVCVARQLDREERDAYNLRVTATDSGSPPLRAEATFVLH 460


>gi|17539702|ref|NP_501486.1| Protein CDH-5, isoform a [Caenorhabditis elegans]
 gi|351060022|emb|CCD67647.1| Protein CDH-5, isoform a [Caenorhabditis elegans]
          Length = 1544

 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 55/178 (30%), Positives = 83/178 (46%), Gaps = 11/178 (6%)

Query: 56  ENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTV 115
           EN P N V++++     R+L     +  +   +F+I   G I   + LD E    Y   V
Sbjct: 252 ENTPPNTVVVSLGDESSRELTYFNVVGGNEEGKFAIDDAGTIVTAEELDREKTAMYSLQV 311

Query: 116 YATDT-----LMTTSATVNISVVNVNDWDPRFRYPQ-YELFLPHIPLADLTPGSVIGK-- 167
                     L  T   V ++V++VND  P F  PQ   L L    +  LT   +IG+  
Sbjct: 312 ETRSRNPDQHLYWT--LVQVTVMDVNDNAPTFTDPQPIRLRLSIDDIEQLTGNMIIGRIG 369

Query: 168 VEAADGDKGDRVTLSLRGPYEKMFSINDSGHISI-VDLSALNTSTIQLVVVATDTGNP 224
           VE AD D   R+ L +  P+ K+F+I++ G +S+  D +A +     L VVA D G P
Sbjct: 370 VEDADADDNGRLELRIMPPHNKLFAISNDGILSVNGDFTAAHFGEHDLTVVARDHGEP 427



 Score = 51.6 bits (122), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 44/164 (26%), Positives = 73/164 (44%), Gaps = 19/164 (11%)

Query: 77  VKYWLSNDYGERFSISR-QGDISLMQCLDYETEDSYRFTVYAT-------DTLMTTSATV 128
           + Y L       FS+S   G ++L++ LD ET  +    +  +       D  +    ++
Sbjct: 736 ITYVLHKGDPSLFSVSSYSGSVNLLRALDAETNSTVTIQISTSEAQTLEVDPKLAHFVSI 795

Query: 129 NISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGD-----RVTLSL 183
            I+V + NDW P F    YE  +      D  PG+++G+V A D D+ +     R  L  
Sbjct: 796 TINVADKNDWIPNFESASYEFDVKE----DTLPGTIVGQVNAFDQDRDEPNNRIRYRLLS 851

Query: 184 RGPYEKMFSIN-DSGHISIVD-LSALNTSTIQLVVVATDTGNPP 225
            G  E  F++N +SG I++   + A     I L +   D+G  P
Sbjct: 852 AGGLEAHFNVNAESGLITLARPIDAFAGEKITLRIEGADSGMLP 895



 Score = 47.8 bits (112), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 38/110 (34%), Positives = 53/110 (48%), Gaps = 7/110 (6%)

Query: 42   ELQFSKNEYSVSALENL-PVNYVLLTVTTNKPRDLR--VKYWLSNDYGERFSISRQGD-- 96
            ELQFS   Y+ S  E + P + V +    NKP D R  +   +S +Y   F I+   D  
Sbjct: 928  ELQFSLRNYTASVSEAVRPPHLVQVLSVMNKPTDTRFIICNIISGNYRGAFGITAGNDGN 987

Query: 97   --ISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRY 144
              +     LD ET + Y   +  T    T  A V+I+V++VND  PRF Y
Sbjct: 988  CELRTQMELDRETVERYLLNITVTAGAQTDYALVSITVLDVNDNVPRFVY 1037


>gi|387017890|gb|AFJ51063.1| Protocadherin 1 [Crotalus adamanteus]
          Length = 1046

 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 58/198 (29%), Positives = 94/198 (47%), Gaps = 16/198 (8%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDY--GERFSISRQ-GDIS 98
           FS++   V+  EN   N +++ V+    +   + ++ Y L+ +    + FSI  + G+I 
Sbjct: 494 FSQSSTEVAFPENNSPNDLVVEVSATDADSGSNAKLIYSLAGESLSKDTFSIDPESGEIH 553

Query: 99  LMQCLDYETEDSYRFTVYATDTLMTT---SATVNISVVNVNDWDPRFRYPQYELFLPHIP 155
           +   LD E ++ Y F V ATD    +   +A++ ISV++ ND DP+F    Y   +    
Sbjct: 554 VKNVLDREQQERYEFLVVATDKGSPSRKGTASIAISVMDRNDNDPKFMLSGYNFSV---- 609

Query: 156 LADLTPGSVIGKVEAADGDKGDR--VTLSLRGPYEKMFSINDSGHI-SIVDLSALNTSTI 212
             ++ P S +G V   D DKGD   + LS+          N +G I S +       ST 
Sbjct: 610 TENMPPLSPVGMVTVIDADKGDNAVIQLSVEQDNGDFVIQNGTGTILSSISFDRERQSTY 669

Query: 213 QLVVVATDTGNPPRQASV 230
              + A D G+PPR A V
Sbjct: 670 TFRLKAVDGGDPPRSAYV 687



 Score = 41.2 bits (95), Expect = 0.83,   Method: Compositional matrix adjust.
 Identities = 29/91 (31%), Positives = 47/91 (51%), Gaps = 15/91 (16%)

Query: 93  RQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYEL 149
           +Q  + +M  LD E  +SY  T+   D       +SA + I+++++ND  P+F  P YE 
Sbjct: 216 KQPQLIVMGNLDREQSESYDLTIRVQDGGSPPRASSALLRITILDMNDNAPKFEKPLYE- 274

Query: 150 FLPHIPLADLTPGSVIG----KVEAADGDKG 176
                  A+L+  S IG    +V+A D D+G
Sbjct: 275 -------AELSENSPIGHSVLQVKANDSDQG 298


>gi|449267132|gb|EMC78098.1| Protocadherin Fat 2 [Columba livia]
          Length = 4375

 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 56/173 (32%), Positives = 81/173 (46%), Gaps = 18/173 (10%)

Query: 45   FSKNEYSVSALENLPVN---YVLLTVTTNKPRDLRVKYWLSNDYGER---FSI-SRQGDI 97
            FS+  Y+ S  E+LP       L     +  R+  V Y + +D  +    F+I    G I
Sbjct: 2273 FSQMIYTASVSESLPAQTPVVQLFASDKDSGRNKAVSYQILDDGSDATKFFNIDGSTGQI 2332

Query: 98   SLMQCLDYETEDSYRFTVYATDTLM---TTSATVNISVVNVNDWDPRFRYPQYELFLPHI 154
            +  Q LDYE    +R  V ATD  M   ++ A V + V ++ND  P F   QYE  +  +
Sbjct: 2333 TTAQALDYERNQQFRMKVRATDHGMPPLSSDALVIVDVTDINDNPPEFSQLQYEAKVSEM 2392

Query: 155  PLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIND-SGHISIVD 203
                 T G ++ KV+A D D GD   L    L G   + F+IN  SG IS+ +
Sbjct: 2393 ----ATCGHIVIKVQALDPDSGDTTRLEYVILSGNDNRHFTINSTSGIISMFN 2441



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 53/184 (28%), Positives = 90/184 (48%), Gaps = 27/184 (14%)

Query: 51   SVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGERFSISRQ-GDISLMQCLDYETED 109
            SV A    P+ Y L+  TT +           ++  E F++ +Q G + + + +D+ET  
Sbjct: 2714 SVRAFAEEPIIYSLVKGTTAE-----------SNKDEVFTLDKQTGALKIKKAMDHETTK 2762

Query: 110  SYRFTVYA----TDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVI 165
             Y+  V A     +T + +  +VNI V +VND  P F    Y+ F+    + ++  G+ +
Sbjct: 2763 WYQIDVMAHCSHQETELVSLVSVNIHVQDVNDNRPVFEADPYKAFV----MENMPSGTTV 2818

Query: 166  GKVEAADGDKGD--RVTLSLR---GPYEKMFSIN-DSGHISIV-DLSALNTSTIQLVVVA 218
             +V A D D G+  +VT SL    G    +F+I+ +SG I+ + +L        +  VVA
Sbjct: 2819 IQVTANDQDTGNDGQVTYSLEAESGNLRGLFTIDGESGWITTLKELDCEAQEIYRFYVVA 2878

Query: 219  TDTG 222
            TD G
Sbjct: 2879 TDHG 2882



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 57/187 (30%), Positives = 85/187 (45%), Gaps = 15/187 (8%)

Query: 50   YSVSALENLPVNYVLLTVTTNKPRDLRVKY-WLSNDYGERFSIS-RQGDISLMQCLDYET 107
            Y V   EN+P+   +L +    P  LR+ Y  +  D  + FS   + G +++   LDYE 
Sbjct: 2177 YRVKVPENIPLYTSILHIQARSPEGLRLIYNIVEEDSLKLFSTDFKTGVLTVTGQLDYEL 2236

Query: 108  EDSYRFTVYATDTLMT--TSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVI 165
            E  + FTV ATDT +   + A V + V +VND  P F    Y   +    L   TP   +
Sbjct: 2237 ETKHTFTVKATDTALGSFSEARVEVEVEDVNDNPPVFSQMIYTASVSE-SLPAQTP---V 2292

Query: 166  GKVEAADGDKGDRVTLSLR-----GPYEKMFSINDS-GHISIVD-LSALNTSTIQLVVVA 218
             ++ A+D D G    +S +         K F+I+ S G I+    L        ++ V A
Sbjct: 2293 VQLFASDKDSGRNKAVSYQILDDGSDATKFFNIDGSTGQITTAQALDYERNQQFRMKVRA 2352

Query: 219  TDTGNPP 225
            TD G PP
Sbjct: 2353 TDHGMPP 2359



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 50/213 (23%), Positives = 91/213 (42%), Gaps = 17/213 (7%)

Query: 33   VSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGER---F 89
            V++   S   L F +  ++ + +E  PVN+++  ++         + W +   G+    F
Sbjct: 1340 VTRPSPSSEPLAFDEPHFNFAVMETDPVNHMVGVISIEMGPS---QVWFNITGGDDDMDF 1396

Query: 90   SISRQ-GDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYE 148
             I +  G + + + LD   + SY  TV  TD   T      I V+++N   P+F    YE
Sbjct: 1397 DIEKSTGSMVIARPLDARKKSSYNLTVEVTDGSTTIKTQAFIHVIDINQHRPQFLESHYE 1456

Query: 149  LFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYE----KMFSINDSGHI--SIV 202
              +P     D   G  I +V A D DKG  +  ++ G  +    ++F ++ S  +  +  
Sbjct: 1457 ERIPE----DTPSGREILRVSATDKDKGKGLIYTIHGSVDPKSTRLFQLDPSSGVLTTAE 1512

Query: 203  DLSALNTSTIQLVVVATDTGNPPRQASVPAIMH 235
              S+       L V+  D   P ++  V  I+H
Sbjct: 1513 GFSSQPMPQHTLTVMVRDQEVPIKRNFVRVIIH 1545



 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 62/230 (26%), Positives = 98/230 (42%), Gaps = 25/230 (10%)

Query: 9    QPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVT 68
            Q   + VRA  +      + A +IV     +    +FS+ +Y     E     ++++ V 
Sbjct: 2344 QQFRMKVRATDHGMPPLSSDALVIVDVTDINDNPPEFSQLQYEAKVSEMATCGHIVIKVQ 2403

Query: 69   TNKPRD---LRVKY-WLSNDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDTLMT 123
               P      R++Y  LS +    F+I S  G IS+      + E  Y   V A+D +  
Sbjct: 2404 ALDPDSGDTTRLEYVILSGNDNRHFTINSTSGIISMFNRCKKDLESFYNLRVSASDGVFK 2463

Query: 124  TSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIG----KVEAADGDKGDRV 179
            ++  V I+  N N + P FR   YE        A+L   + IG    ++ A D D G   
Sbjct: 2464 STVPVYINTTNANKYSPSFRQNVYE--------AELAENAEIGTKVIELLAIDPDGGPYG 2515

Query: 180  TLSL----RGPYEKMFSINDSGHISIVDLSALNTST---IQLVVVATDTG 222
            T+      +  +EK FSI+D GHI+ +       ST   I + V+A D G
Sbjct: 2516 TIDYTIINKLAHEK-FSIDDKGHITTLQKLDRENSTERVIAIKVMAKDGG 2564



 Score = 47.8 bits (112), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 62/201 (30%), Positives = 90/201 (44%), Gaps = 22/201 (10%)

Query: 41   RELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYG-ERFSISRQGDISL 99
            + L+F ++ Y+ + +EN   +   LTV   K   L    + S   G ERF + +   +  
Sbjct: 1965 KGLKFDQDVYTATVMEN-STDEKTLTVLGVKGYQLNEPLFYSLLNGKERFKMIQASGVLQ 2023

Query: 100  MQC--LDYETEDSYRFTVYATDTL---MTTSATVNISVVNVNDWDPRFRYPQYELFLPHI 154
             +    D E +D +   V   D       + ATV + V +VND  P+F    Y     + 
Sbjct: 2024 TKGVKFDREAQDMHEVAVEVKDNRKPPRVSQATVKVYVEDVNDNPPQFENVPY-----YT 2078

Query: 155  PLADLT-PGSVIGKVEAADGDKGDR--VTLSLRGPYEKMFSINDS-GHISI---VDLSAL 207
             + D T PG V+ +V A D D GD   +T S    Y K F I+   G IS+   +D  AL
Sbjct: 2079 SVQDGTEPGDVLFQVSATDKDIGDNGAITYSFAEDY-KYFWIDPYLGDISLKKPLDYQAL 2137

Query: 208  NTSTIQLVVVATDTGNPPRQA 228
            N     L V+A D G PP  A
Sbjct: 2138 N--KYNLRVIAKDKGEPPLHA 2156



 Score = 47.8 bits (112), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 55/203 (27%), Positives = 92/203 (45%), Gaps = 16/203 (7%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTTN----KPRDLRVKYWLS-NDYGERFSISR-QGD- 96
            QF+ + Y  S +EN     V++T++T       ++ RV  +++  D   +F++++ +G+ 
Sbjct: 2906 QFTSDFYKGSVIENAEPGQVVVTLSTIDADISEQNRRVTCYITEGDALGQFTVNQIEGEW 2965

Query: 97   -ISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIP 155
             IS  + LD E  + Y   V A+D        V I V+++ND  P       ++F     
Sbjct: 2966 TISSKKPLDREDTEKYLLKVMASDGKFQAITEVEIFVLDINDNSPECG----QIFYTGRV 3021

Query: 156  LADLTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSIN-DSGHISI-VDLSALNTST 211
                 PG  I K+ A D D G   ++T SL GP  + F +   +G ++    L       
Sbjct: 3022 SEGALPGLFILKISATDPDVGSNAQITYSLHGPGAEEFRLGPHTGELTTSAPLDREQKPM 3081

Query: 212  IQLVVVATDTGNPPRQASVPAIM 234
              LV  ATD G    QA +  I+
Sbjct: 3082 YHLVAKATDGGGRSCQADITLIV 3104



 Score = 46.2 bits (108), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 53/195 (27%), Positives = 87/195 (44%), Gaps = 23/195 (11%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKP---RDLRVKYWLSNDYGER---FSI-SRQGDI 97
            F  + Y    +EN+P    ++ VT N      D +V Y L  + G     F+I    G I
Sbjct: 2799 FEADPYKAFVMENMPSGTTVIQVTANDQDTGNDGQVTYSLEAESGNLRGLFTIDGESGWI 2858

Query: 98   SLMQCLDYETEDSYRFTVYATD----TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
            + ++ LD E ++ YRF V ATD      +++   V ++V + ND  P+F    Y+  +  
Sbjct: 2859 TTLKELDCEAQEIYRFYVVATDHGRKVQLSSQTLVEVTVSDENDNAPQFTSDFYKGSV-- 2916

Query: 154  IPLADLTPGSVIGKVEAADGD---KGDRVTLSL-RGPYEKMFSIND-SGHISIVDLSAL- 207
              + +  PG V+  +   D D   +  RVT  +  G     F++N   G  +I     L 
Sbjct: 2917 --IENAEPGQVVVTLSTIDADISEQNRRVTCYITEGDALGQFTVNQIEGEWTISSKKPLD 2974

Query: 208  --NTSTIQLVVVATD 220
              +T    L V+A+D
Sbjct: 2975 REDTEKYLLKVMASD 2989



 Score = 45.1 bits (105), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 69/283 (24%), Positives = 114/283 (40%), Gaps = 34/283 (12%)

Query: 27   ALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLL---TVTTNKPRDLRVKYWL-- 81
            AL T+ VS    +     F   EY     E++ V   +L    +T +   +  +KY +  
Sbjct: 3201 ALGTVTVSVVDLNEYLPVFLAPEYMAMVKEDVAVGTEVLNLSALTRDNAENTEIKYEIVN 3260

Query: 82   SNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVN---VNDW 138
             ND+G+    S  G + +   LD+E    Y  ++  T     + + V + V+N   +ND 
Sbjct: 3261 GNDHGKFQLNSNTGALYINGSLDFEASHEYYLSIEGTRKGSASLSDVTMVVINITDINDH 3320

Query: 139  DPRFRYPQYELFLPHIPLADLTPGSVIGKV------EAADGDKGDRVTLSL-RGPYEKMF 191
             P F    Y         AD+   + +G++      +  DG   +++T S+  G     F
Sbjct: 3321 APEFIQDPY--------FADIREDAAVGEIILTVSADDLDGAMNNQITYSIVEGNPLGHF 3372

Query: 192  SIN-DSGHISIVD-LSALNTSTIQLVVVATDTGNPPRQASVPAIMHFPEAIVQQASSKLN 249
            +I   SG ISI   L      +  L V ATD G+P + + V   +H          S +N
Sbjct: 3373 AIQPKSGQISIAKHLDREEIPSYSLTVRATDNGHPAQFSDVALHIHV---------SDVN 3423

Query: 250  SGTSSTVLIILGVVLIVLGFVIILLILYIHKNKHTKNNGPPGS 292
                    +   VV+     V   ++  I  ++ T  NGPP S
Sbjct: 3424 DNPPRFFQLNYSVVVQENAPVGTSVLELIMSDRDTPENGPPYS 3466



 Score = 44.7 bits (104), Expect = 0.080,   Method: Compositional matrix adjust.
 Identities = 57/187 (30%), Positives = 86/187 (45%), Gaps = 13/187 (6%)

Query: 51   SVSALENLPVNYVLLTVTTNKP---RDLRVKYWLSNDYGERFSISR-QGDISLMQCLDYE 106
            +V   E+LPV  +LL +    P       V+Y L +D    F + +  G + L + LDYE
Sbjct: 933  NVKVPEDLPVGTILLFLEVFDPDTGSGGEVRYSLISDEEMMFHMDKLTGALRLEKELDYE 992

Query: 107  TEDSYRFTVYATD--TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTP-GS 163
             +DSY  TV  +D     + S+  ++  VN+ D +     P++  F+    + + +P G+
Sbjct: 993  KKDSYNLTVQVSDGGKPFSRSSLCHLE-VNILDVNENLHPPRFASFVFKGWVQENSPEGT 1051

Query: 164  VIGKVEAADGDKGD--RVTLSLR-GPYEKMFSI-NDSGHISIVD-LSALNTSTIQLVVVA 218
             +  V A D DKG    V    R G    +FSI  D+G I     L    TS   L V+A
Sbjct: 1052 SVMMVTAKDIDKGKDGEVQYFFREGTGLSVFSIEKDTGTIRTTGPLDREGTSHYWLTVLA 1111

Query: 219  TDTGNPP 225
             D G  P
Sbjct: 1112 LDLGTIP 1118



 Score = 40.4 bits (93), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 41/125 (32%), Positives = 61/125 (48%), Gaps = 14/125 (11%)

Query: 103  LDYETEDSYRFTVYATDT-----LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLA 157
            +DYE    + F+V+A D+       +  A V I V +VND  P F    YEL +    L 
Sbjct: 1829 IDYELTPVFHFSVHAHDSGNPSLFASKPAKVTIHVKDVNDSPPVFSKDNYELSV----LL 1884

Query: 158  DLTPGSVIGKVEAADGDKGDRVTLSL-RGPYEKMFSIND-SGHISIVDLSALNTSTIQLV 215
               PG  +  V+A D D    VT S+ +G  +  F I+  +G +SI++ + L  S  +L 
Sbjct: 1885 PAHPGMELLSVQAKDADS--EVTYSIVKGNLDNAFYIHPVTGLLSILNATGLG-SHRELT 1941

Query: 216  VVATD 220
            V A D
Sbjct: 1942 VRAGD 1946



 Score = 38.1 bits (87), Expect = 7.7,   Method: Compositional matrix adjust.
 Identities = 47/195 (24%), Positives = 84/195 (43%), Gaps = 20/195 (10%)

Query: 12   TLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLL------ 65
            +L VRA    +  +++   L +  +  +    +F +  YSV   EN PV   +L      
Sbjct: 3396 SLTVRATDNGHPAQFSDVALHIHVSDVNDNPPRFFQLNYSVVVQENAPVGTSVLELIMSD 3455

Query: 66   --TVTTNKPRDLRVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDT--- 120
              T     P   ++     ND G+ F +++ G +     L+   ++ Y   V  +D+   
Sbjct: 3456 RDTPENGPPYSFQITQ--GND-GKAFDVTQNGLLVTSSILNRRMKEQYLLQVQVSDSGIP 3512

Query: 121  LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRV- 179
             +++SA +NI V   + + P       E+F+      +   G V+GK+ A D D  D + 
Sbjct: 3513 PLSSSAFINIQVTEQSQYAPSAL--PLEIFI--TTNEEAFRGGVLGKIHATDRDPHDTLV 3568

Query: 180  -TLSLRGPYEKMFSI 193
             TL    P E +FS+
Sbjct: 3569 YTLVAEVPQEGLFSV 3583


>gi|281339742|gb|EFB15326.1| hypothetical protein PANDA_009494 [Ailuropoda melanoleuca]
          Length = 4593

 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 47/202 (23%), Positives = 90/202 (44%), Gaps = 30/202 (14%)

Query: 7    FLQPITLVVRAIQYDNQDRYALATL-------------------IVSKAGTSLRELQFSK 47
            F++P T VV + ++     Y + ++                    +SK   S+  + F +
Sbjct: 1300 FIEPKTGVVSSKKFSGAGEYDILSIKAVDNGRPQKSSTTRLHIEWISKPKPSVGPISFEE 1359

Query: 48   NEYSVSALENLPVNYVLLTVTTNKPRDLRVKYW---LSNDYGERFSISR-QGDISLMQCL 103
              +S + +E+ PV +++  ++   P       W   +  +    F + +  G I + + L
Sbjct: 1360 PSFSFTVMESDPVAHMIGVISVEPPG---TPLWFDIIGGNSDSHFDVDKGTGTIIVAKAL 1416

Query: 104  DYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGS 163
            D E + SY  TV ATD        V I V++ ND  P+F   +YE+ +P     D  P +
Sbjct: 1417 DAEQKSSYDLTVEATDGTTAVLTQVFIKVIDTNDHRPQFSASKYEVVIPE----DTVPET 1472

Query: 164  VIGKVEAADGDKGDRVTLSLRG 185
             I ++ A D D+ +++  +L+G
Sbjct: 1473 EILQISAVDKDEKNKLIYTLQG 1494



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 59/217 (27%), Positives = 103/217 (47%), Gaps = 18/217 (8%)

Query: 29   ATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWLSNDY 85
            A + ++  G +L    F ++EY V   EN P++ +++ V            + Y + ND+
Sbjct: 2481 AQVHITVIGGNLHSPVFPQSEYEVELAENAPLHTLVIEVKAADGDSGIYGHITYHIVNDF 2540

Query: 86   G-ERFSISRQGDISLMQCLDYET--EDSYRFTVYATDTLMTTS-ATVNISVVNVNDWDPR 141
              +RF  + +G I  ++ LD ET  E      + A D     +  T+N+ + + ND  P+
Sbjct: 2541 AKDRFYTNERGQIFTLEKLDRETPVEKVISVRLMAKDAGGKVAFCTINVILTDDNDNAPQ 2600

Query: 142  FRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDR--VTLSLRGPYEKM---FSIND- 195
            FR  +YE+ +     ++   G+ + KV A+D D+G    VT ++    E +     IN  
Sbjct: 2601 FRATRYEVDIG----SNAPKGTSVIKVLASDADEGSNADVTYAIEADSESVKENLEINKL 2656

Query: 196  SGHISIVD-LSALNTSTIQLVVVATDTGNPPRQASVP 231
            SG I+  + L  L        V A D+G+P R++ VP
Sbjct: 2657 SGIITTKESLIGLENEFFTFFVRAVDSGSPSRESVVP 2693



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 43/145 (29%), Positives = 71/145 (48%), Gaps = 8/145 (5%)

Query: 90   SISRQGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYEL 149
            +I  +  + + + LD E  D+Y  T+ ATD   ++ A V + V++ ND  P      Y  
Sbjct: 2976 NIQNEWKVYVKKPLDREKRDNYLLTITATDGTFSSKAIVEVKVLDANDNSPVCEKTLYSD 3035

Query: 150  FLPHIPLADLTPGSVIGKVEAADGD--KGDRVTLSLRGPYEKMFSIN-DSGHI-SIVDLS 205
             +P     D +PG +I +V A D D      +T +L GP  + F++N D+G + ++  L 
Sbjct: 3036 TVPE----DASPGQLILQVSATDADIRSNAEITYTLLGPGAEKFTLNPDTGELRTLAPLD 3091

Query: 206  ALNTSTIQLVVVATDTGNPPRQASV 230
                    L+V ATD G    QA++
Sbjct: 3092 REEQGVYNLLVKATDGGGRSCQANL 3116



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 57/201 (28%), Positives = 96/201 (47%), Gaps = 23/201 (11%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSN-DYGERFSIS-RQGDISLMQC 102
            F K  YS    EN+ ++  ++ +  + P   +V Y +++ D   +F+++   G IS++  
Sbjct: 2187 FEKPFYSAEVPENVQLHSPVVHIQADSPEGFKVFYSITDGDPFSQFTVNFNTGVISVIAP 2246

Query: 103  LDYETEDSYRFTVYATDTLMTTSATV--NISVVNVNDWDPRFRYPQYELFLPHIPLADLT 160
            LD+E+  +Y+ ++ ATD+L    A V  +I V ++ND  P F +  Y           L+
Sbjct: 2247 LDFESHPAYKLSIRATDSLTGAHADVFADIIVEDINDSPPVFVHQSY--------ATTLS 2298

Query: 161  PGSVIG----KVEAADGDK--GDRVTLSLRGPYEK---MFSINDS-GHISIVD-LSALNT 209
              SVIG    +V A D D      ++  + G + K    F I+ S G IS+V  L     
Sbjct: 2299 EASVIGTSVVQVRATDSDSEPNRGISYHMFGNHSKSHDHFHIDSSTGLISLVRTLDYEQF 2358

Query: 210  STIQLVVVATDTGNPPRQASV 230
               ++ V A D G PP  + V
Sbjct: 2359 QQHKIFVRAVDGGMPPLSSDV 2379



 Score = 51.6 bits (122), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 71/279 (25%), Positives = 128/279 (45%), Gaps = 30/279 (10%)

Query: 27   ALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLS---- 82
            A  T++VS    +     F   +Y  +  E++ +   +L V     RD+     ++    
Sbjct: 3217 ATGTVVVSVLDINDNPPVFEYRDYGATVSEDVLIGTEVLQVYAVS-RDIEANAEITYSIM 3275

Query: 83   --NDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVN 136
              N++G +FSI SR G I +++ LDYE+   Y  T+ A D     ++  ATV+I+V ++N
Sbjct: 3276 SGNEHG-KFSIDSRTGAIFVIENLDYESSREYYLTIEAMDGGTPSLSDVATVSINVTDIN 3334

Query: 137  DWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS-LRGPYEKMFSIND 195
            D  P F    Y   +    L + +  +V+   + ADG     +  S + G     F+++ 
Sbjct: 3335 DNSPVFSQDTYTAVVSEDALLEQSVITVMA--DDADGPSNSHIRYSIIDGNQGSPFTVDP 3392

Query: 196  S-GHISIVDLSALNTSTIQ---LVVVATDTGNPPRQASVPAIMHFPEAIVQQASSKLNSG 251
            + G + +  L  L+  TI    L V A+D G+PPR  +    +   +  V   +   + G
Sbjct: 3393 TRGEVKVTKL--LDRETISGYTLTVQASDNGSPPRVNTTTVNIDVSD--VNDNAPVFSKG 3448

Query: 252  TSSTVLIILGVVLIVLGFVIILLILYIHKNKHTKNNGPP 290
              S ++     V    GF ++ L++    +K + +NGPP
Sbjct: 3449 NYSVIIQENKPV----GFSVLQLVV---SDKDSSHNGPP 3480



 Score = 51.2 bits (121), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 62/236 (26%), Positives = 108/236 (45%), Gaps = 24/236 (10%)

Query: 4    EDDFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYV 63
            E++F    T  VRA+   +  R ++  + V      ++  +FS+  Y+ +  E++P+   
Sbjct: 2670 ENEFF---TFFVRAVDSGSPSRESVVPVYVKILPPEIQLPKFSEPFYTYTVSEDMPIGTE 2726

Query: 64   LLTVTTNKPRDLRVKYWLSN----DYGERFSISRQ-GDISLMQCLDYETEDSYRFTVYAT 118
            +  +       +       N    +  E F I RQ G + L + LD+E    Y+F++ A 
Sbjct: 2727 IDLIRAEHSGTVLYSLIKGNTPESNRDEFFVIDRQSGRLKLEKSLDHEITKWYQFSILAR 2786

Query: 119  ----DTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGD 174
                D  +  S  V+I V + ND  P      YE F+    + +L  GS + +V A+D D
Sbjct: 2787 CTHDDYEVVASVDVSIQVKDANDNSPVLESNPYEAFI----VENLPAGSRVIQVRASDLD 2842

Query: 175  KG--DRVTLSLRGPYE----KMFSIN-DSGHISIV-DLSALNTSTIQLVVVATDTG 222
             G   +VT SL         + F+IN ++G I+ + +L      + Q+ VVA+D G
Sbjct: 2843 SGTNGQVTYSLDQSQSMEVIESFAINVETGWITTLKELDHEKRDSYQIQVVASDHG 2898



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 63/226 (27%), Positives = 103/226 (45%), Gaps = 21/226 (9%)

Query: 13   LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKP 72
            L+V+A   D   R   A L+++    +    +FS + Y+++  EN      LLT      
Sbjct: 3100 LLVKAT--DGGGRSCQANLVLTLEDVNDNAPEFSADPYTITVFENTEPG-TLLTRVQATD 3156

Query: 73   RD----LRVKYWLSNDYGERFSISR-QGDISLMQCLDYETEDSYRFTVYATDT----LMT 123
            RD     ++ Y L N    +FSI+   G I L + LD E +  Y  T+ A D      +T
Sbjct: 3157 RDSGLNRKISYSLVNSVDGQFSINELSGIIQLEKPLDREQQAVYSLTLKAVDQGLPRRLT 3216

Query: 124  TSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAA--DGDKGDRVTL 181
             + TV +SV+++ND  P F Y  Y   +      D+  G+ + +V A   D +    +T 
Sbjct: 3217 ATGTVVVSVLDINDNPPVFEYRDYGATVSE----DVLIGTEVLQVYAVSRDIEANAEITY 3272

Query: 182  S-LRGPYEKMFSIND-SGHISIVD-LSALNTSTIQLVVVATDTGNP 224
            S + G     FSI+  +G I +++ L   ++    L + A D G P
Sbjct: 3273 SIMSGNEHGKFSIDSRTGAIFVIENLDYESSREYYLTIEAMDGGTP 3318



 Score = 44.3 bits (103), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 54/195 (27%), Positives = 87/195 (44%), Gaps = 20/195 (10%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTTNKPRDL----RVKYWLSNDYGERFSISR-QGDIS 98
            +F +  Y V   E+  +N  ++ V     +DL     V Y +  D  ++FSI    G + 
Sbjct: 820  EFLQESYFVEVSEDKEINSEIIQVEATD-KDLGPNGHVTYSVLTD-TDKFSIDGVTGVVK 877

Query: 99   LMQCLDYETEDSYRFTVYATDTL-----MTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
            +M+ LD E +  +   + A D       + ++  + +S+ +VND  P+F  P Y + +  
Sbjct: 878  VMRPLDREAQHVHYLKIEARDQAREEPQLLSTVLLKVSLEDVNDNPPKFVPPNYRVKV-- 935

Query: 154  IPLADLTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSIND-SGHISIVD-LSALNT 209
                DL  G++I  +EA D D G   +V  SL    E  F ++  SG + IV  L     
Sbjct: 936  --REDLPEGTIIMWLEAYDPDLGQSSQVRYSLLDHGEGHFDVDKLSGAVRIVQHLDFEKK 993

Query: 210  STIQLVVVATDTGNP 224
                L V A D G P
Sbjct: 994  QVYNLTVRAKDKGKP 1008



 Score = 44.3 bits (103), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 42/161 (26%), Positives = 74/161 (45%), Gaps = 12/161 (7%)

Query: 45   FSKNEYSVSALENLPVNY-VLLTVTTNKPRDLRVKYWL----SNDYGERFSISRQGDISL 99
            FSK  YSV   EN PV + VL  V ++K        +     S +    F +++QG +  
Sbjct: 3445 FSKGNYSVIIQENKPVGFSVLQLVVSDKDSSHNGPPFFFSVVSGNDDRAFEVNQQGVLLT 3504

Query: 100  MQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
               +  + +D Y   V   D     +++ A ++I ++  + + P       E+F+     
Sbjct: 3505 SAAIKRKVKDHYLLHVKVADNGKPPLSSLAYIDIRIIEESIYPPAIL--PLEIFI--TAF 3560

Query: 157  ADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSG 197
             +   G VIGK+ A D D  D +T SL    +++FS++ +G
Sbjct: 3561 GEEYSGGVIGKIHATDQDVYDTLTYSLDPQMDQLFSVSSTG 3601



 Score = 43.5 bits (101), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 54/191 (28%), Positives = 86/191 (45%), Gaps = 30/191 (15%)

Query: 56   ENLPVNYVLLTVTTNKP---RDLRVKYWLSNDYG-ERFSISRQ-GDISLMQCLDYETEDS 110
            E++PV + ++TV+ +     RD  V+Y + +  G   F I  + G +   + LD E+   
Sbjct: 1044 EDVPVGFSIMTVSAHDEDTGRDGEVRYSIRDGSGVGVFRIDEETGVVETAERLDRESTPH 1103

Query: 111  YRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSV-IG 166
            Y  TVYATD     +++   + I V +VND  P+   P   ++ P I   + +P  V + 
Sbjct: 1104 YWLTVYATDRGVVPLSSFVEIYIEVEDVNDNAPQTSEP---VYYPEI--IENSPKDVSVV 1158

Query: 167  KVEAADGDKGDRVTLSLRGPYEKMFSINDSGHISIVDLSALNTSTIQ-----------LV 215
             +EA D D      L       K+ S N  G  S+   + L T+T +           L 
Sbjct: 1159 HIEAFDPDSSSNDKLMY-----KITSGNPQGFFSVHPKTGLITTTSRKLDREQQDEHILE 1213

Query: 216  VVATDTGNPPR 226
            V  TD G PP+
Sbjct: 1214 VTVTDNGIPPK 1224



 Score = 39.3 bits (90), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 56/199 (28%), Positives = 87/199 (43%), Gaps = 30/199 (15%)

Query: 45   FSKNEYSVSALENLPVNYVLLT--------VTTNKPRD---LRVKYWLSNDYGERFSI-S 92
            F++ EY+    E+  +N V+LT          T+  R+   L V + +     + F+I S
Sbjct: 1770 FTQAEYTGLISESASINSVVLTDKNVPLVIRATDADRESNALLVYHIVEPSLHKYFAIDS 1829

Query: 93   RQGDISLMQCLDYETEDSYRFTVYATDT-----LMTTSATVNISVVNVNDWDPRFRYPQY 147
              G I  +  LDYE   ++ FTV   D          +A V I V+++ND  P F    Y
Sbjct: 1830 STGAIHTVLSLDYEETRTFHFTVQVHDMGTPRLFAEYAANVTIRVIDINDCPPVFSKSLY 1889

Query: 148  E--LFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPY--EKMFSINDSGHISI 201
            E  L LP         G  +  V A D D     +V  S+      EK+F  + +G I++
Sbjct: 1890 EASLLLP------TYRGVKVITVNATDADSSAFSQVMYSITEGNIGEKLFMDHRTGAITV 1943

Query: 202  VDLSALNTSTIQLVVVATD 220
             + + L  S  +L V A+D
Sbjct: 1944 QNTTQLR-SRYELTVRASD 1961



 Score = 37.7 bits (86), Expect = 8.7,   Method: Compositional matrix adjust.
 Identities = 44/142 (30%), Positives = 70/142 (49%), Gaps = 22/142 (15%)

Query: 48   NEYSVSALENLPVNYVLLTVTTNKPRDL------RVKYWL----SNDYGERFSISRQ-GD 96
            N Y    +ENLP    ++ V   +  DL      +V Y L    S +  E F+I+ + G 
Sbjct: 2817 NPYEAFIVENLPAGSRVIQV---RASDLDSGTNGQVTYSLDQSQSMEVIESFAINVETGW 2873

Query: 97   ISLMQCLDYETEDSYRFTVYATD----TLMTTSATVNISVVNVNDWDPRFRYPQYELFLP 152
            I+ ++ LD+E  DSY+  V A+D      ++++A V+++V +VND  PRF    Y+  + 
Sbjct: 2874 ITTLKELDHEKRDSYQIQVVASDHGEKVQLSSTAVVDVTVTDVNDSPPRFTAEIYKGTVS 2933

Query: 153  HIPLADLTPGSVIGKVEAADGD 174
                 D  PG VI  +   D D
Sbjct: 2934 E----DDPPGGVIAILSTTDAD 2951


>gi|194389090|dbj|BAG61562.1| unnamed protein product [Homo sapiens]
          Length = 915

 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 68/216 (31%), Positives = 100/216 (46%), Gaps = 20/216 (9%)

Query: 45  FSKNEYSVSALENLPVNYV--LLTVTTNKPRDLRVKYWLSNDYGERFSISRQ-GDISLMQ 101
           F+ NEY+    ENLP +    L+TVT     D         D  + F+I  Q G I    
Sbjct: 599 FTHNEYNFYVPENLPRHGTVGLITVTDPDYGDNSAVTLSILDENDDFTIDSQTGVIRPNI 658

Query: 102 CLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYP----QYELFLPHI 154
             D E ++SY F V A D      ++SA V I+VV+VND  P F  P     YEL LP  
Sbjct: 659 SFDREKQESYTFYVKAEDGGRVSRSSSAKVTINVVDVNDNKPVFIVPPSNCSYELVLPST 718

Query: 155 PLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-DSGHISIVDLSALNTS 210
                 PG+V+ +V A D D G    +    + G    +F+I+ ++G+I++++   +   
Sbjct: 719 -----NPGTVVFQVIAVDNDTGMNAEVRYSIVGGNTRDLFAIDQETGNITLMEKCDVTDL 773

Query: 211 TIQLVVV-ATDTGNPPRQASVPAIMHFPEAIVQQAS 245
            +  V+V A D G P    SV  +  F    V  A+
Sbjct: 774 GLHRVLVKANDLGQPDSLFSVVIVNLFVNESVTNAT 809



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/114 (32%), Positives = 61/114 (53%), Gaps = 10/114 (8%)

Query: 76  RVKYWLSNDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNIS 131
           ++ Y L  D    FS+  R G +++++ LD E ED Y FT+ A D     +T++ TV +S
Sbjct: 529 KINYLLGPDAPPEFSLDCRTGMLTVVKKLDREKEDKYLFTILAKDNGVPPLTSNVTVFVS 588

Query: 132 VVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDR--VTLSL 183
           +++ ND  P F + +Y  ++P     +L     +G +   D D GD   VTLS+
Sbjct: 589 IIDQNDNSPVFTHNEYNFYVPE----NLPRHGTVGLITVTDPDYGDNSAVTLSI 638



 Score = 38.1 bits (87), Expect = 6.6,   Method: Compositional matrix adjust.
 Identities = 36/139 (25%), Positives = 67/139 (48%), Gaps = 15/139 (10%)

Query: 103 LDYETEDSYRFTVYATDTLM---TTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADL 159
           LD E +D+Y   V   D      +++A + +SV + ND  P F+  + E+ +P     + 
Sbjct: 236 LDREEKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVFKETEIEVSIPE----NA 291

Query: 160 TPGSVIGKVEAADGDKGDRVTLS------LRGPYEKMFSIN-DSGHISIVD-LSALNTST 211
             G+ + ++ A D D G+   +       +     ++F +N  +G I+I + L    T  
Sbjct: 292 PVGTSVTQLHATDADIGENAKIHFSFSNLVSNIARRLFHLNTTTGLITIKEPLDREETPN 351

Query: 212 IQLVVVATDTGNPPRQASV 230
            +L+V+A+D G  P +A V
Sbjct: 352 HKLLVLASDGGLMPARAMV 370


>gi|348586988|ref|XP_003479250.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 2-like
           [Cavia porcellus]
          Length = 2925

 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 67/219 (30%), Positives = 98/219 (44%), Gaps = 22/219 (10%)

Query: 25  RYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWL 81
           R ALATL +    T+  +  F + EY  S  ENL V Y +LTV     + P +  + Y L
Sbjct: 272 RSALATLTILVTDTNDHDPVFEQQEYKESLRENLEVGYEVLTVRATDGDAPPNANILYRL 331

Query: 82  SNDYG----ERFSIS-RQGDISLMQCLDYETEDSYRFTVYATDT-----LMTTSATVNIS 131
               G    E F I  R G I     +D E  +SY+  V A+D          +A V +S
Sbjct: 332 LEGSGGGPSEVFEIDPRSGVIRTRGPVDREEVESYKLIVEASDQGRDPGPRGATAAVFLS 391

Query: 132 VVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYE 188
           V + ND  P+F   +Y + +      D+ PG+ I ++ A+D DKG    +    + G   
Sbjct: 392 VEDDNDNAPQFSEKRYIVQV----REDVAPGAPILRITASDRDKGSNALVHYSIMSGNAR 447

Query: 189 KMFSIN-DSGHISIVD-LSALNTSTIQLVVVATDTGNPP 225
             F ++  +G + +V  L    T    L V A D G PP
Sbjct: 448 GQFYLDAQTGALDVVSPLDYETTKEYTLRVRAQDGGRPP 486



 Score = 51.2 bits (121), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 49/171 (28%), Positives = 80/171 (46%), Gaps = 15/171 (8%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGERFSIS---RQGDIS 98
           F    +  + LE++P+ Y++L V     +   + R++Y L+   G  F  +     G IS
Sbjct: 508 FVSTPFQATVLESVPLGYLVLHVQAIDADAGDNARLEYRLAG-VGHDFPFTINNGTGWIS 566

Query: 99  LMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIP 155
           +   LD E  D Y F V A D     +T SA+V++++++VND +P F  P+Y + L    
Sbjct: 567 VAAELDREEVDFYSFGVEARDHGTPPLTASASVSVTILDVNDNNPTFTQPEYTVRLNE-- 624

Query: 156 LADLTPGSVIGKVEAADGDKGDRVTLSL-RGPYEKMFSINDSGHISIVDLS 205
             D   G+ +  V A D D    +T  +  G     FSI       +V L+
Sbjct: 625 --DAAVGTSVVTVSAVDRDAHSVITYQITSGNTRNRFSITSQSGGGLVSLA 673



 Score = 44.3 bits (103), Expect = 0.095,   Method: Compositional matrix adjust.
 Identities = 50/189 (26%), Positives = 86/189 (45%), Gaps = 14/189 (7%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRDLR--VKYWL-SNDYGERFSISRQ---GDIS 98
           F++ EY+V   E+  V   ++TV+    RD    + Y + S +   RFSI+ Q   G +S
Sbjct: 613 FTQPEYTVRLNEDAAVGTSVVTVSAVD-RDAHSVITYQITSGNTRNRFSITSQSGGGLVS 671

Query: 99  LMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLAD 158
           L   LDY+ E  Y   V A+D     +A + ++V + N   P F+   Y + +      D
Sbjct: 672 LALPLDYKLERQYVLAVTASDGTRQDTAQIVVNVTDANTHRPVFQSSHYTVNVNE----D 727

Query: 159 LTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSINDSGHISI-VDLSALNTSTIQLV 215
              G+ +  + A D D G+  R+T  +     +     D+G ++   +L   +  +  L 
Sbjct: 728 RPAGTTVVLISATDEDTGENARITYFMEDSIPQFRIDADTGAVTTQAELDYEDQVSYTLA 787

Query: 216 VVATDTGNP 224
           + A D G P
Sbjct: 788 ITARDNGIP 796



 Score = 44.3 bits (103), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 42/160 (26%), Positives = 73/160 (45%), Gaps = 10/160 (6%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWL-SNDYGERFSIS-RQGDISL 99
            F ++E+ V   EN P+   +  VT   P +    ++ Y +   +  E F +    G+++ 
Sbjct: 924  FEQDEFDVFVEENSPIGLAVARVTATDPDEGTNAQIMYQIVEGNIPEVFQLDIFSGELTA 983

Query: 100  MQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPH--IPLA 157
            +  LDYE    Y   + AT   + + ATV++ +++ ND  P      +E+   +     +
Sbjct: 984  LVDLDYEDRPEYILVIQATSAPLVSRATVHVRLLDRNDNPPVLG--NFEILFNNYVTNRS 1041

Query: 158  DLTPGSVIGKVEAADGDKGDRVTLSL-RGPYEKMFSINDS 196
               PG  IG+V A D D  D +T S  RG    +  +N S
Sbjct: 1042 SSFPGGAIGRVPAHDPDISDSLTYSFERGNELSLVLLNGS 1081



 Score = 38.5 bits (88), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 52/228 (22%), Positives = 97/228 (42%), Gaps = 16/228 (7%)

Query: 15  VRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVN--YVLLTVT-TNK 71
           V A+   +  R   A ++V+    +     F  + Y+V+  E+ P     VL++ T  + 
Sbjct: 685 VLAVTASDGTRQDTAQIVVNVTDANTHRPVFQSSHYTVNVNEDRPAGTTVVLISATDEDT 744

Query: 72  PRDLRVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDTLM---TTSATV 128
             + R+ Y++ +   +    +  G ++    LDYE + SY   + A D  +   + +  +
Sbjct: 745 GENARITYFMEDSIPQFRIDADTGAVTTQAELDYEDQVSYTLAITARDNGIPQKSDTTYL 804

Query: 129 NISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG--DRV--TLSLR 184
            I V +VND  P+F    Y+  +      D+ P + + ++ A D D G   RV  T    
Sbjct: 805 EILVNDVNDNAPQFLRDSYQGSV----YEDVPPFTSVLQISATDRDSGLNGRVFYTFQGG 860

Query: 185 GPYEKMFSINDSGHI--SIVDLSALNTSTIQLVVVATDTGNPPRQASV 230
              +  F +  +  I  ++  L   N +   L   A D G PP + S+
Sbjct: 861 DDGDGDFIVESTSGIVRTLRRLDRENVAQYSLRAYAVDKGMPPARTSM 908


>gi|426245749|ref|XP_004016666.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin-16 [Ovis aries]
          Length = 3155

 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 63/211 (29%), Positives = 91/211 (43%), Gaps = 20/211 (9%)

Query: 31   LIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDY-GERF 89
            ++V   GT      F    Y V           +L V    P    V Y L+ D  G  F
Sbjct: 984  VVVQDLGTRGLAPHFDSPTYRVDLPSGTTPGTQVLQVQARAPDGGPVTYHLAADGPGSPF 1043

Query: 90   SISRQ-GDISLMQCLDYETEDSYRFTVYATDT------LMTTSATVNISVVNVNDWDPRF 142
             +  Q G + +   LD+E ++ Y   V A           T +ATV +S++N ND  PR 
Sbjct: 1044 GLEPQSGWLWVRAALDHEAQELYTLKVMAVSGSKAELGQQTATATVRVSILNQNDHSPRL 1103

Query: 143  -RYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYE--KMFSIN-DS 196
               P +     + P     PG+ +G+V A D D G   R+T SLR   E  K F I+  +
Sbjct: 1104 SEEPTFLAVAENQP-----PGTSVGRVFATDRDSGLNGRLTYSLRQLSEDSKAFRIHPQT 1158

Query: 197  GHISIVD-LSALNTSTIQLVVVATDTGNPPR 226
            G ++ +  L     S+ QL+V   D G+PPR
Sbjct: 1159 GEVTTLQTLDRERQSSYQLLVQVQDAGSPPR 1189



 Score = 58.5 bits (140), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 62/192 (32%), Positives = 95/192 (49%), Gaps = 23/192 (11%)

Query: 56  ENLPVNYVLLTVTTNKPRDLRVKYW-LSNDYGE-RFSISRQGDISLMQC----LDYETED 109
           E  P   ++  ++ + P D    +  +S + GE  F++S Q  +  + C    LD E  D
Sbjct: 375 EAAPPGQLVARISVSDPDDGDFAHVNVSLEGGEGHFALSTQDSVIYLVCVARRLDREERD 434

Query: 110 SYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLT-PGSVI 165
           +Y   V ATD+    +   A   + V +VND  P F     +L+ P  PL ++  PGS +
Sbjct: 435 AYNLRVTATDSGSPPLRAEAAFVLHVTDVNDNAPAF---DRQLYRPE-PLPEVALPGSFV 490

Query: 166 GKVEAADGDKG--DRVTLSLR-GPYEKMFSINDSGHISIVDLSALNTSTI----QLVVVA 218
            +V A D D+G   +VT SL  G + + FSI+ +    IV  +AL    +    QL+VVA
Sbjct: 491 VRVTARDPDQGTNGQVTYSLAPGAHTRWFSIDPTS--GIVTTAALLDYELEPQPQLIVVA 548

Query: 219 TDTGNPPRQASV 230
           TD G PP  +S 
Sbjct: 549 TDGGLPPLSSSA 560



 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 64/199 (32%), Positives = 94/199 (47%), Gaps = 28/199 (14%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNK----PRDLRVKYWLSNDYGERFSI----SRQGD 96
            F++  Y V+  E+ PV   LL V  +     P  L V++ LS+  G+   +       GD
Sbjct: 2504 FTRAAYRVAVPEDTPVGAELLHVEASDADPGPHGL-VRFTLSS--GDPLGLFELDESSGD 2560

Query: 97   ISLMQCLDYETEDSYRFTVYATDTLMT--TSATVNISVVNVNDWDPRFRYPQYELFLPHI 154
            + L + LD ET+  ++  V A D        A V I V +VND  P F      L L   
Sbjct: 2561 LRLARPLDCETQARHQLVVQAADPAGAHFALAPVTIEVQDVNDHGPAF-----PLSLLST 2615

Query: 155  PLAD-LTPGSVIGKVEAADGDKG--DRVTLSL--RGPY---EKMFSINDS-GHI-SIVDL 204
             LA+   PG+++  + A DGD G   R+  SL   GP     + F++N S G + + V  
Sbjct: 2616 SLAENQPPGTLVTTLHAIDGDAGAFGRLHYSLLEAGPGPEGREAFALNSSTGELRARVAF 2675

Query: 205  SALNTSTIQLVVVATDTGN 223
               +T + QL+V ATD GN
Sbjct: 2676 DYEHTGSFQLLVGATDAGN 2694



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 72/261 (27%), Positives = 113/261 (43%), Gaps = 46/261 (17%)

Query: 11   ITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLT---- 66
            + +V+ A  +    R A AT+ V     +     F+   Y V+  E+LP    LLT    
Sbjct: 2350 VDVVLEARDHGVPGRAARATVHVQLQDQNDHAPSFTLPHYRVAVTEDLPPGSTLLTLEAT 2409

Query: 67   ---------------VTTNKPRDLRVKYWLSNDYGERFSISRQ--GDISLMQCLDYETED 109
                           V+ N+ R  +++  L+ + GE   +  +  G + L++ LD+E+  
Sbjct: 2410 DADGSRSHATVDYSIVSGNRGRVFQLEPRLA-EAGESDGLGPRALGCLVLLEPLDFESLT 2468

Query: 110  SYRFTVYATDTLM---TTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIG 166
             Y  TV ATD      +++  V +SV++VND  P F    Y + +P     D   G+ + 
Sbjct: 2469 QYNLTVAATDRGQPPRSSAVPVTVSVLDVNDNPPVFTRAAYRVAVPE----DTPVGAELL 2524

Query: 167  KVEAADGDKGD----RVTLSLRGPYEKMFSIND-SGHISIV-DLSALNTSTIQLVVVATD 220
             VEA+D D G     R TLS   P   +F +++ SG + +   L     +  QLVV A D
Sbjct: 2525 HVEASDADPGPHGLVRFTLSSGDPL-GLFELDESSGDLRLARPLDCETQARHQLVVQAAD 2583

Query: 221  TGNPPRQASVPAIMHFPEAIV 241
                      PA  HF  A V
Sbjct: 2584 ----------PAGAHFALAPV 2594



 Score = 55.8 bits (133), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 58/198 (29%), Positives = 83/198 (41%), Gaps = 14/198 (7%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKP---RDLRVKYWLSNDYGERFSIS-RQGDISLM 100
            F    YSV   E+ P   +LL +  + P    + RV Y+L       F +    G++   
Sbjct: 1757 FPVPSYSVEVPEDAPAGTLLLQLQAHDPDAGANGRVTYYLGTGAAGAFLLEPSSGELRTA 1816

Query: 101  QCLDYETEDSYRFTVYATDTL----MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
              LD E   SY FTV A D+     ++T+  V I+V +VND  P F      L LP    
Sbjct: 1817 TTLDREQCPSYAFTVNAVDSAAAGPLSTTVPVTITVRDVNDHAPTFPTSPLRLRLPRPGP 1876

Query: 157  ADLTPGSVIGKVEAADGDKGDRVTLSLR-----GPYEKMFSINDSGHISIVDLSALNTST 211
               TP   +  + A D D G   ++  R      P   + S      +S   +S L+   
Sbjct: 1877 VLSTPTLPLATLRAEDRDAGANASILYRLAGTPPPGTTVDSYTGEIRVSRSPVS-LSPRD 1935

Query: 212  IQLVVVATDTGNPPRQAS 229
              L +VATD G P R A+
Sbjct: 1936 RVLFIVATDLGRPARSAT 1953



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 70/252 (27%), Positives = 116/252 (46%), Gaps = 37/252 (14%)

Query: 14   VVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALEN------LPVNYVLLTV 67
            V  A+ ++ Q+ Y L  + VS +   L + Q +     VS L        L      L V
Sbjct: 1054 VRAALDHEAQELYTLKVMAVSGSKAELGQ-QTATATVRVSILNQNDHSPRLSEEPTFLAV 1112

Query: 68   TTNKP------------RDL----RVKYWLS--NDYGERFSISRQ-GDISLMQCLDYETE 108
              N+P            RD     R+ Y L   ++  + F I  Q G+++ +Q LD E +
Sbjct: 1113 AENQPPGTSVGRVFATDRDSGLNGRLTYSLRQLSEDSKAFRIHPQTGEVTTLQTLDRERQ 1172

Query: 109  DSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYEL--FLPHIPLAD-LTPG 162
             SY+  V   D      +T+ TV+I+V+++ND  P F          LP I + D + PG
Sbjct: 1173 SSYQLLVQVQDAGSPPRSTTGTVHIAVLDLNDNSPTFLQASGAAGGGLP-IQVPDGVPPG 1231

Query: 163  SVIGKVEAADGDKGDRVTLS--LRGPYEKMFSIN-DSGH-ISIVDLSALNTSTIQLVVVA 218
            +++  ++A D D+G+  T+   L GP  ++FS++  SG  ++   L         L + A
Sbjct: 1232 TLVTTLQAKDPDEGENGTILYILTGPGSELFSLHPHSGELLTAAPLIRAERPHYVLTLSA 1291

Query: 219  TDTGNPPRQASV 230
             D G+PPR +S+
Sbjct: 1292 HDQGSPPRSSSL 1303



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 49/149 (32%), Positives = 65/149 (43%), Gaps = 15/149 (10%)

Query: 89   FSISR-QGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQY 147
            FS+ R  G +SL   LD+E  D Y   + A D      A + + V +VND  P F    Y
Sbjct: 2224 FSVGRYGGRLSLTGPLDFEQRDRYHLQLLAHDGPHEGRANLTVLVEDVNDNAPAFSQTLY 2283

Query: 148  E-LFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDSGH-----I 199
            + + L H P     PGS I  V A D D G    V+  L  P E  FSI+ +       +
Sbjct: 2284 QVMLLEHTP-----PGSAILSVSATDRDSGANGHVSYHLASPAEG-FSIDPNNGTLFTTV 2337

Query: 200  SIVDLSALNTSTIQLVVVATDTGNPPRQA 228
              V L       + +V+ A D G P R A
Sbjct: 2338 GTVALGHEGPGMVDVVLEARDHGVPGRAA 2366



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 48/148 (32%), Positives = 66/148 (44%), Gaps = 11/148 (7%)

Query: 13   LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKP 72
            L V A  + +  R A   L VS A  +     F + EYSV   EN P    LLT+    P
Sbjct: 1519 LTVVASDHGSPPRSATQLLTVSVADVNDEAPAFQQLEYSVLLRENSPPGTSLLTLQATDP 1578

Query: 73   RDL----RVKYWLSNDYGERFSISRQ-GDISLMQCLDYETEDSYRFTVYATD---TLMTT 124
             DL    +V Y      GE FS+    G ++ ++ LD E ++    TVYA D     + T
Sbjct: 1579 -DLGTNGQVTY--GGISGENFSLDPDTGVLTTLRALDREEQEEINLTVYARDGGSPPLLT 1635

Query: 125  SATVNISVVNVNDWDPRFRYPQYELFLP 152
              TV ++V + ND  P F      L +P
Sbjct: 1636 HVTVRVAVEDENDHAPAFGSAHLSLEVP 1663



 Score = 44.3 bits (103), Expect = 0.091,   Method: Compositional matrix adjust.
 Identities = 42/127 (33%), Positives = 63/127 (49%), Gaps = 13/127 (10%)

Query: 58  LPVNYVLLTVTTNKP---RDLRVKYWLSNDYGER-FSIS-RQGDISLMQCLDYETEDSYR 112
           LP ++V+  VT   P    + +V Y L+     R FSI    G ++    LDYE E   +
Sbjct: 485 LPGSFVV-RVTARDPDQGTNGQVTYSLAPGAHTRWFSIDPTSGIVTTAALLDYELEPQPQ 543

Query: 113 FTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVE 169
             V ATD     +++SATV++ + +VND +P+F+   Y   LP        PG+   +V 
Sbjct: 544 LIVVATDGGLPPLSSSATVSVVLQDVNDNEPQFQRTFYNASLPE----GTQPGTCFLQVT 599

Query: 170 AADGDKG 176
           A D D G
Sbjct: 600 ATDADSG 606



 Score = 43.5 bits (101), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 57/198 (28%), Positives = 85/198 (42%), Gaps = 21/198 (10%)

Query: 42  ELQFSKNEYSVSALENLPVNYVLLTVTT----NKPRDLRVKYWLSNDYGER----FSI-S 92
           E QF +  Y+ S  E        L VT     + P  L + Y L    G      F I +
Sbjct: 573 EPQFQRTFYNASLPEGTQPGTCFLQVTATDADSGPFGL-LSYSLGAGLGTSGSPPFRIDA 631

Query: 93  RQGDISLMQCLDY-ETEDSYRFTVYATDTLMTTSAT-VNISVVNVNDWDPRFRYPQYELF 150
             GD+   + LD  +   S+ FTV A D     S   V + V + ND  P+F   +Y   
Sbjct: 632 HSGDVCTTRTLDRDQGPSSFDFTVTAVDGGGLKSMVYVKVFVSDENDNPPQFYPREYAAS 691

Query: 151 LPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIND-SGHISIV-DLS 205
           L     A   PG+ + +V A D D+G    LS   L G    +F++++ SG + +   L+
Sbjct: 692 L----SAQSAPGTAVLRVRAHDPDQGPHGRLSYHILAGNSPPLFALDEHSGLLPVAWPLA 747

Query: 206 ALNTSTIQLVVVATDTGN 223
              +S +QL + A D G 
Sbjct: 748 RRASSMVQLEIGARDGGG 765



 Score = 41.6 bits (96), Expect = 0.69,   Method: Compositional matrix adjust.
 Identities = 27/94 (28%), Positives = 48/94 (51%), Gaps = 9/94 (9%)

Query: 95   GDISLMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFL 151
            G+   M+ LD E E +++  + A D     ++ +  V ++V++ ND  P F  P Y + +
Sbjct: 1707 GEFGTMRPLDREVEPAFQLQIEARDGGQPALSATLLVTVTVLDANDHAPAFPVPSYSVEV 1766

Query: 152  PHIPLADLTPGSVIGKVEAADGDKG--DRVTLSL 183
            P     D   G+++ +++A D D G   RVT  L
Sbjct: 1767 PE----DAPAGTLLLQLQAHDPDAGANGRVTYYL 1796



 Score = 38.9 bits (89), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 45/163 (27%), Positives = 70/163 (42%), Gaps = 22/163 (13%)

Query: 89  FSI-SRQGDISLMQCLDYETEDSYRFTVYATDTLMTT---SATVNISVVNVNDWDPRFRY 144
           FSI +  G + L + LD+E    +   V A D        SA V + V + ND  P    
Sbjct: 303 FSIDAHTGLLRLERPLDFEQRRVHELVVQARDGGAHPELGSAFVTVHVRDANDNQPSMTV 362

Query: 145 PQYELFL-----PHIPLADLTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSINDSG 197
               +FL     P +  A   PG ++ ++  +D D GD   V +SL G  E  F+++   
Sbjct: 363 ----IFLSADGSPRVSEA-APPGQLVARISVSDPDDGDFAHVNVSLEG-GEGHFALSTQD 416

Query: 198 HISIV-----DLSALNTSTIQLVVVATDTGNPPRQASVPAIMH 235
            +  +      L         L V ATD+G+PP +A    ++H
Sbjct: 417 SVIYLVCVARRLDREERDAYNLRVTATDSGSPPLRAEAAFVLH 459


>gi|126291072|ref|XP_001378094.1| PREDICTED: protocadherin-12 [Monodelphis domestica]
          Length = 1182

 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 81/339 (23%), Positives = 148/339 (43%), Gaps = 61/339 (17%)

Query: 45  FSKNEYSVSALEN-LPVNYVLLTVTTNKPRDL--RVKYWL-SNDYGERFSI-SRQGDISL 99
           F  ++Y++S  EN LP ++++     +   DL  +V Y L  + +    +I S  G+IS 
Sbjct: 457 FEVSKYNISIWENNLPSSHLITVKARDADLDLNGKVTYRLQESSFSHLVAIDSDTGEISA 516

Query: 100 MQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYP-------QYEL 149
              LDYE    ++F V A D     + +SA+V +S++++ND  P    P          +
Sbjct: 517 STTLDYEQMTGFQFLVIAEDGGEPRLVSSASVKVSLLDINDNAPIVVQPVLSGGTASISV 576

Query: 150 FL----PHIPLADLTPGS----------------------VIGKVEAADGDKGDRVTLSL 183
           F+     H+ ++  TP S                       I  ++A  GD G+ +    
Sbjct: 577 FVNSSTGHLMVSSETPDSYRATVSGTSSLVASRSWLFLLMTIVAIDADSGDNGNLLYAIQ 636

Query: 184 RGPYEKMFSINDSGHISIVDLSALNTSTI-----QLVVVATDTGNPPRQASVPAIMHFPE 238
            G   ++F ++   H+  + ++A N S++     +L++V TD GNPP +      + F  
Sbjct: 637 SGNEARLFFLDP--HVGQLYINATNASSLIGTEWELMIVVTDLGNPPLETRAMVKVTFTN 694

Query: 239 AI-----VQQASSKLNSGTSSTVLIILGVVLIVLGFVIILLILYIHKNKHTKNNGPPGSS 293
           ++     + Q SS L   ++S V +I   VL+ +  +I++LI+ I +     N     + 
Sbjct: 695 SLDHLKNLAQESSPL---STSVVTVICLAVLLAIFLLILVLIVSICRTDRKDNRA--YNC 749

Query: 294 HSKNDSFLSNVILPEKHVNVVAIPKIQENPVFNGSQEEL 332
                ++      P+K +    I  +   PV  G  EEL
Sbjct: 750 REAESTYRHQPKRPQKQIQKTDIHLV---PVLRGQVEEL 785


>gi|41223268|emb|CAD92433.1| protocadherin [Homo sapiens]
          Length = 762

 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 76/274 (27%), Positives = 119/274 (43%), Gaps = 40/274 (14%)

Query: 45  FSKNEYSVSALENLPVNYV--LLTVTTNKPRDLRVKYWLSNDYGERFSISRQ-GDISLMQ 101
           F+ NEY     ENLP +    L+TVT     D         D  + F+I  Q G I    
Sbjct: 390 FTHNEYKFYVPENLPRHGTVGLITVTDPDYGDNSAVTLSILDENDDFTIDSQTGVIRPNI 449

Query: 102 CLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYP----QYELFLPHI 154
             D E ++SY F V A D      ++SA V I+VV+VND  P F  P     YEL LP  
Sbjct: 450 SFDREKQESYTFYVKAEDGGRVSRSSSAKVTINVVDVNDNKPVFIVPPYNYSYELVLPST 509

Query: 155 PLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-DSGHISIVDLSALNTS 210
                 PG+V+ +V A D D G    +    + G    +F+I+ ++G+I++++   +   
Sbjct: 510 -----NPGTVVFQVIAVDNDTGMNAEVRYSIVGGNTRDLFAIDQETGNITLMEKCDVTDL 564

Query: 211 TIQLVVV-ATDTGNPPRQASVPAIMHFPEAIVQQAS--------------------SKLN 249
            +  V+V A D G P    SV  +  F    V  A+                    + ++
Sbjct: 565 GLHRVLVKANDLGQPDSLFSVVIVNLFVNESVTNATLINELVRKSIEAPVTPNTEIADVS 624

Query: 250 SGTSSTVLIILGVVLIVLGFVIILLILYIHKNKH 283
           S TS  V I++  V   +  V+++ I  + + + 
Sbjct: 625 SPTSDYVKILVAAVAGTITVVVVIFITAVVRCRQ 658



 Score = 58.2 bits (139), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 37/114 (32%), Positives = 62/114 (54%), Gaps = 10/114 (8%)

Query: 76  RVKYWLSNDYGERFSISRQ-GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNIS 131
            + Y L  D    FS+ R+ G +++++ LD E ED Y FT+ A D     +T++ TV +S
Sbjct: 320 EINYLLGPDAPPEFSLDRRTGMLTVVKKLDREKEDKYLFTILAKDNGVPPLTSNVTVFVS 379

Query: 132 VVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDR--VTLSL 183
           +++ ND  P F + +Y+ ++P     +L     +G +   D D GD   VTLS+
Sbjct: 380 IIDQNDNSPVFTHNEYKFYVPE----NLPRHGTVGLITVTDPDYGDNSAVTLSI 429



 Score = 37.7 bits (86), Expect = 9.8,   Method: Compositional matrix adjust.
 Identities = 36/139 (25%), Positives = 67/139 (48%), Gaps = 15/139 (10%)

Query: 103 LDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADL 159
           LD E +D+Y   V   D      +++A + +SV + ND  P F+  + E+ +P     + 
Sbjct: 27  LDREEKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVFKETEIEVSIPE----NA 82

Query: 160 TPGSVIGKVEAADGDKGDRVTLS------LRGPYEKMFSIN-DSGHISIVD-LSALNTST 211
             G+ + ++ A D D G+   +       +     ++F +N  +G I+I + L    T  
Sbjct: 83  PVGTSVTQLHATDADIGENAKIHFSFSNLVSNIARRLFHLNATTGLITIKEPLDREETPN 142

Query: 212 IQLVVVATDTGNPPRQASV 230
            +L+V+A+D G  P +A V
Sbjct: 143 HKLLVLASDGGLMPARAMV 161


>gi|410948357|ref|XP_003980907.1| PREDICTED: protocadherin gamma-A3 [Felis catus]
          Length = 827

 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 59/204 (28%), Positives = 93/204 (45%), Gaps = 17/204 (8%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWLSNDYGERFSI----SRQGDI 97
           F+++EY +S  ENLPV   LLTV    P +    +V Y L    G+   I    S  GDI
Sbjct: 242 FTQSEYQLSIQENLPVGTTLLTVNATDPDEGFNAQVSYILDKMPGKVAEIFYLNSVTGDI 301

Query: 98  SLMQCLDYETEDSYRFTVYATDT-LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
           S+++ LDYE    Y   + A D   + + A + ++V++VND  P          +P    
Sbjct: 302 SILKSLDYEDAMFYEIKIEAQDGPGLLSRAKILVTVLDVNDNAPEVTITSLTESVPE--- 358

Query: 157 ADLTPGSVIGKVEAADGDKGD--RVTLSLRG--PYEKMFSINDSGH-ISIVDLSALNTST 211
            + T G  I  +   D D G   +VT+ + G  P+    SI+     ++   L     S 
Sbjct: 359 -EATAGREIALINVHDRDSGQNGQVTVFVLGNVPFNLEKSIDQYYRLVTARSLDREQVSE 417

Query: 212 IQLVVVATDTGNPPRQASVPAIMH 235
             + + ATD G+PP   ++   +H
Sbjct: 418 YNITLRATDGGSPPLSTNIHITLH 441



 Score = 54.7 bits (130), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 73/274 (26%), Positives = 117/274 (42%), Gaps = 45/274 (16%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKP---RDLRVKYWLSND--YGERFSI-----SRQ 94
           FS+  YS    EN P    +  VT   P   ++  + + L+ D   G   S      S  
Sbjct: 452 FSQASYSAYIPENNPRGASIFCVTAQDPDSIQNAHITFALTEDTIQGAPLSTYVSINSDT 511

Query: 95  GDISLMQCLDYETEDSYRFTVYATDTL---MTTSATVNISVVNVNDWDPRFRYPQYELFL 151
           G +  ++  DYE     +  V A+D+    ++++ +++I V++ ND  P   YP     L
Sbjct: 512 GVLYALRSFDYEQVRDLQLLVTASDSGNPPLSSNVSLSIFVLDQNDNAPEILYPA----L 567

Query: 152 P-----HIPLA--DLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-DSGHI- 199
           P      + LA     PG ++ KV A D D G    LS   L+     +F++   +G + 
Sbjct: 568 PTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKASEPGLFTVGLHTGEVR 627

Query: 200 ---SIVDLSALNTSTIQLVVVATDTGNPPRQASV----------PAIMHFPEAIVQQASS 246
              +++D  AL  S   LVV   D G PP  A+V          P ++    +I   A  
Sbjct: 628 TARALLDRDALKQS---LVVAVQDHGQPPLSATVTLTVAVADNIPDVLADLGSIRTAADP 684

Query: 247 KLNSGTSSTVLIILGVVLIVLGFVIILLILYIHK 280
             +  T   V+ +  V  I L FVI+LL L + +
Sbjct: 685 DDSDLTLYLVVAVAAVSCIFLAFVIVLLGLRLRR 718



 Score = 42.0 bits (97), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 40/143 (27%), Positives = 66/143 (46%), Gaps = 17/143 (11%)

Query: 101 QCLDYETEDSYRFTVYATDTL---MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLA 157
           + LD E    Y  T+ ATD     ++T+  + + V ++ND  P F    Y  ++P     
Sbjct: 408 RSLDREQVSEYNITLRATDGGSPPLSTNIHITLHVADINDNPPAFSQASYSAYIPE---- 463

Query: 158 DLTPGSVIGKVEAADGD--KGDRVTLSLR------GPYEKMFSIN-DSGHI-SIVDLSAL 207
           +   G+ I  V A D D  +   +T +L        P     SIN D+G + ++      
Sbjct: 464 NNPRGASIFCVTAQDPDSIQNAHITFALTEDTIQGAPLSTYVSINSDTGVLYALRSFDYE 523

Query: 208 NTSTIQLVVVATDTGNPPRQASV 230
               +QL+V A+D+GNPP  ++V
Sbjct: 524 QVRDLQLLVTASDSGNPPLSSNV 546


>gi|48976115|ref|NP_001001759.1| cadherin-related family member 1 precursor [Gallus gallus]
 gi|82244739|sp|Q8UVJ7.1|CDHR1_CHICK RecName: Full=Cadherin-related family member 1; AltName:
           Full=Photoreceptor cadherin; Short=prCAD; AltName:
           Full=Protocadherin-21; Flags: Precursor
 gi|18182379|gb|AAL65141.1|AF426394_1 photoreceptor cadherin [Gallus gallus]
          Length = 865

 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 60/184 (32%), Positives = 87/184 (47%), Gaps = 13/184 (7%)

Query: 52  VSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGER--FSISRQ-GDISLMQCLDYETE 108
           +S  E+ PV   + T+    P    V Y L+ + G R  FS+    G+++L++ LD E E
Sbjct: 44  LSLSEDTPVGSHVYTLNGTDPEGDPVTYGLTYEAGSRRYFSVDGNLGNVTLIEELDREKE 103

Query: 109 DSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKV 168
           D     V  +D L T S  V I V++ ND  P F    Y + +P     +   GS I K+
Sbjct: 104 DEIEVIVSISDGLSTVSEKVRILVMDANDESPEFINTPYIVQVPE----NSPSGSSIFKI 159

Query: 169 EAADGD--KGDRVTLSLRGPYEKMFSIN-DSGHISI---VDLSALNTSTIQLVVVATDTG 222
           EA D D   G  +T  L+  +   F+I+  SG + I   V L    + T  +VVVA D G
Sbjct: 160 EAVDRDTGSGGSITYFLQNIHANKFTIDRHSGVLRIKSGVTLDYEKSRTHFVVVVAKDGG 219

Query: 223 NPPR 226
              R
Sbjct: 220 GKLR 223



 Score = 43.1 bits (100), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 45/177 (25%), Positives = 75/177 (42%), Gaps = 22/177 (12%)

Query: 44  QFSKNEYSVSALENLPVN---YVLLTVTTNKPRDLRVKYWLSNDYGERFSISRQGDISLM 100
           +F    Y V   EN P     + +  V  +      + Y+L N +  +F+I R   +  +
Sbjct: 136 EFINTPYIVQVPENSPSGSSIFKIEAVDRDTGSGGSITYFLQNIHANKFTIDRHSGVLRI 195

Query: 101 QC---LDYETEDSYRFTVYATD---------TLMTTSATVNISVVNVNDWDPRFRYPQYE 148
           +    LDYE   ++   V A D          + + + TV ++V +V D  P F    Y 
Sbjct: 196 KSGVTLDYEKSRTHFVVVVAKDGGGKLRGDNKVFSATTTVTVNVEDVQDTPPMFIGTPYY 255

Query: 149 LFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSI-NDSGHISIV 202
            ++      D  PGS +  V A DGD+G  + +   +    E  F I N +G IS++
Sbjct: 256 GYV----YEDTLPGSEVLTVVALDGDRGKPNNIHYCIVNGSEGSFEISNTTGAISVI 308


>gi|18027280|gb|AAL55729.1|AF277053_1 protocadherin-PC [Homo sapiens]
          Length = 1037

 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 76/274 (27%), Positives = 119/274 (43%), Gaps = 40/274 (14%)

Query: 45  FSKNEYSVSALENLPVNYV--LLTVTTNKPRDLRVKYWLSNDYGERFSISRQ-GDISLMQ 101
           F+ NEY     ENLP +    L+TVT     D         D  + F+I  Q G I    
Sbjct: 591 FTHNEYKFYVPENLPRHGTVGLITVTDPDYGDNSAVTLSILDENDDFTIDSQTGVIRPNI 650

Query: 102 CLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYP----QYELFLPHI 154
             D E ++SY F V A D      ++SA V I+VV+VND  P F  P     YEL LP  
Sbjct: 651 SFDREKQESYTFYVKAEDGGRVSRSSSAKVTINVVDVNDNKPVFIVPPYNYSYELVLPST 710

Query: 155 PLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-DSGHISIVDLSALNTS 210
                 PG+V+ +V A D D G    +    + G    +F+I+ ++G+I++++   +   
Sbjct: 711 -----NPGTVVFQVIAVDNDTGMNAEVRYSIVGGNTRDLFAIDQETGNITLMEKCDVTDL 765

Query: 211 TIQLVVV-ATDTGNPPRQASVPAIMHFPEAIVQQAS--------------------SKLN 249
            +  V+V A D G P    SV  +  F    V  A+                    + ++
Sbjct: 766 GLHRVLVKANDLGQPDSLFSVVIVNLFVNESVTNATLINELVRKSIEAPVTPNTEIADVS 825

Query: 250 SGTSSTVLIILGVVLIVLGFVIILLILYIHKNKH 283
           S TS  V I++  V   +  V+++ I  + + + 
Sbjct: 826 SPTSDYVKILVAAVAGTITVVVVIFITAVVRCRQ 859



 Score = 58.2 bits (139), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 37/114 (32%), Positives = 62/114 (54%), Gaps = 10/114 (8%)

Query: 76  RVKYWLSNDYGERFSISRQ-GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNIS 131
            + Y L  D    FS+ R+ G +++++ LD E ED Y FT+ A D     +T++ TV +S
Sbjct: 521 EINYLLGPDAPPEFSLDRRTGMLTVVKKLDREKEDKYLFTILAKDNGVPPLTSNVTVFVS 580

Query: 132 VVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDR--VTLSL 183
           +++ ND  P F + +Y+ ++P     +L     +G +   D D GD   VTLS+
Sbjct: 581 IIDQNDNSPVFTHNEYKFYVPE----NLPRHGTVGLITVTDPDYGDNSAVTLSI 630



 Score = 38.1 bits (87), Expect = 7.4,   Method: Compositional matrix adjust.
 Identities = 36/139 (25%), Positives = 67/139 (48%), Gaps = 15/139 (10%)

Query: 103 LDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADL 159
           LD E +D+Y   V   D      +++A + +SV + ND  P F+  + E+ +P     + 
Sbjct: 228 LDREEKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVFKETEIEVSIPE----NA 283

Query: 160 TPGSVIGKVEAADGDKGDRVTLS------LRGPYEKMFSIN-DSGHISIVD-LSALNTST 211
             G+ + ++ A D D G+   +       +     ++F +N  +G I+I + L    T  
Sbjct: 284 PVGTSVTQLHATDADIGENAKIHFSFSNLVSNIARRLFHLNATTGLITIKEPLDREETPN 343

Query: 212 IQLVVVATDTGNPPRQASV 230
            +L+V+A+D G  P +A V
Sbjct: 344 HKLLVLASDGGLMPARAMV 362


>gi|41223266|emb|CAD92432.1| protocadherin [Homo sapiens]
          Length = 841

 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 76/274 (27%), Positives = 119/274 (43%), Gaps = 40/274 (14%)

Query: 45  FSKNEYSVSALENLPVNYV--LLTVTTNKPRDLRVKYWLSNDYGERFSISRQ-GDISLMQ 101
           F+ NEY     ENLP +    L+TVT     D         D  + F+I  Q G I    
Sbjct: 390 FTHNEYKFYVPENLPRHGTVGLITVTDPDYGDNSAVTLSILDENDDFTIDSQTGVIRPNI 449

Query: 102 CLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYP----QYELFLPHI 154
             D E ++SY F V A D      ++SA V I+VV+VND  P F  P     YEL LP  
Sbjct: 450 SFDREKQESYTFYVKAEDGGRVSRSSSAKVTINVVDVNDNKPVFIVPPYNYSYELVLPST 509

Query: 155 PLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-DSGHISIVDLSALNTS 210
                 PG+V+ +V A D D G    +    + G    +F+I+ ++G+I++++   +   
Sbjct: 510 -----NPGTVVFQVIAVDNDTGMNAEVRYSIVGGNTRDLFAIDQETGNITLMEKCDVTDL 564

Query: 211 TIQLVVV-ATDTGNPPRQASVPAIMHFPEAIVQQAS--------------------SKLN 249
            +  V+V A D G P    SV  +  F    V  A+                    + ++
Sbjct: 565 GLHRVLVKANDLGQPDSLFSVVIVNLFVNESVTNATLINELVRKSIEAPVTPNTEIADVS 624

Query: 250 SGTSSTVLIILGVVLIVLGFVIILLILYIHKNKH 283
           S TS  V I++  V   +  V+++ I  + + + 
Sbjct: 625 SPTSDYVKILVAAVAGTITVVVVIFITAVVRCRQ 658



 Score = 58.2 bits (139), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 37/114 (32%), Positives = 62/114 (54%), Gaps = 10/114 (8%)

Query: 76  RVKYWLSNDYGERFSISRQ-GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNIS 131
            + Y L  D    FS+ R+ G +++++ LD E ED Y FT+ A D     +T++ TV +S
Sbjct: 320 EINYLLGPDAPPEFSLDRRTGMLTVVKKLDREKEDKYLFTILAKDNGVPPLTSNVTVFVS 379

Query: 132 VVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDR--VTLSL 183
           +++ ND  P F + +Y+ ++P     +L     +G +   D D GD   VTLS+
Sbjct: 380 IIDQNDNSPVFTHNEYKFYVPE----NLPRHGTVGLITVTDPDYGDNSAVTLSI 429



 Score = 37.7 bits (86), Expect = 9.6,   Method: Compositional matrix adjust.
 Identities = 36/139 (25%), Positives = 67/139 (48%), Gaps = 15/139 (10%)

Query: 103 LDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADL 159
           LD E +D+Y   V   D      +++A + +SV + ND  P F+  + E+ +P     + 
Sbjct: 27  LDREEKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVFKETEIEVSIPE----NA 82

Query: 160 TPGSVIGKVEAADGDKGDRVTLS------LRGPYEKMFSIN-DSGHISIVD-LSALNTST 211
             G+ + ++ A D D G+   +       +     ++F +N  +G I+I + L    T  
Sbjct: 83  PVGTSVTQLHATDADIGENAKIHFSFSNLVSNIARRLFHLNATTGLITIKEPLDREETPN 142

Query: 212 IQLVVVATDTGNPPRQASV 230
            +L+V+A+D G  P +A V
Sbjct: 143 HKLLVLASDGGLMPARAMV 161


>gi|26335563|dbj|BAC31482.1| unnamed protein product [Mus musculus]
          Length = 796

 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 61/197 (30%), Positives = 88/197 (44%), Gaps = 23/197 (11%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVT-TNKPRDLRVKYWLS-----NDYGERFSI-SRQGDI 97
           F+++EY VS  EN PV   LLT+T T+    +  K   S     +   E F + S  G+I
Sbjct: 242 FTQSEYRVSVPENTPVGTRLLTLTATDADEGINAKLTFSFRNEEDKISETFQLDSNLGEI 301

Query: 98  SLMQCLDYETEDSYRFTVYATD-TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
           S +Q LDYE    Y   V A D   +  SA V ++V +VND  P       E+ L  +  
Sbjct: 302 STIQSLDYEESRFYLMEVVAQDGGALLASAKVLVTVQDVNDNAP-------EVILTSLTS 354

Query: 157 A---DLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDS--GHISIVDLSALN--- 208
           +   D  PG++I      D D G+   +S   P    F +  S   +  ++   AL+   
Sbjct: 355 SVSEDCLPGTIIALFSVHDADSGENGEISCSIPKNLPFKLEKSVDNYYHLLTTRALDREE 414

Query: 209 TSTIQLVVVATDTGNPP 225
           TS   + V   D G PP
Sbjct: 415 TSDYNITVTVVDRGTPP 431



 Score = 42.7 bits (99), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 57/214 (26%), Positives = 93/214 (43%), Gaps = 35/214 (16%)

Query: 45  FSKNEYSVSALENLPVNYVLLTV---TTNKPRDLRVKYWLSNDYGERFSISR-------Q 94
           FS+  YS S  EN P    + +V     +   + +V Y L+ +  +   +S         
Sbjct: 452 FSRPFYSTSISENNPRGVSIFSVYAYDADSGDNAQVTYSLAENTFQEVPVSSYVSINSDT 511

Query: 95  GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFL 151
           G +  +Q  DYE     +  V A D+    ++++ ++++ V++ ND  P   YP     +
Sbjct: 512 GVLYALQSFDYEHLRDLQLLVTAKDSGTPPLSSNVSMSLFVLDQNDNIPEILYPT----I 567

Query: 152 P-----HIPLA--DLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-DSGHI- 199
           P      + LA     PG ++ KV A D D G    LS   L+     +FSI   +G + 
Sbjct: 568 PTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYRLLKASEPGLFSIGLHTGEVC 627

Query: 200 ---SIVDLSALNTSTIQLVVVATDTGNPPRQASV 230
              +++D   L  S   LVV   D G PP  A+V
Sbjct: 628 TARALLDRDVLKQS---LVVAVQDHGQPPLSATV 658



 Score = 39.7 bits (91), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 43/144 (29%), Positives = 65/144 (45%), Gaps = 19/144 (13%)

Query: 101 QCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLA 157
           + LD E    Y  TV   D     ++T   +++ V ++ND  P F  P Y        ++
Sbjct: 408 RALDREETSDYNITVTVVDRGTPPLSTENHISLKVADINDNPPTFSRPFYS-----TSIS 462

Query: 158 DLTP-GSVIGKVEAADGDKGD--RVTLSLRG------PYEKMFSIN-DSGHI-SIVDLSA 206
           +  P G  I  V A D D GD  +VT SL        P     SIN D+G + ++     
Sbjct: 463 ENNPRGVSIFSVYAYDADSGDNAQVTYSLAENTFQEVPVSSYVSINSDTGVLYALQSFDY 522

Query: 207 LNTSTIQLVVVATDTGNPPRQASV 230
            +   +QL+V A D+G PP  ++V
Sbjct: 523 EHLRDLQLLVTAKDSGTPPLSSNV 546


>gi|347543897|gb|AEP02521.1| PCDH15, partial [Chaerephon plicatus]
          Length = 1918

 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 64/241 (26%), Positives = 108/241 (44%), Gaps = 27/241 (11%)

Query: 6   DFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVN---- 61
           DF Q   LV++A Q +     A A+L +     + +   F+   Y    LE+ PV     
Sbjct: 349 DFHQKFDLVIKAEQDNGHPLPAFASLHIEILDENNQSPYFTMPSYQGYILESAPVGATIS 408

Query: 62  ----------YVLLTVTTNKPRDLRVKYWLSNDYGERFSISRQG---DISLMQCLDYETE 108
                      V L       +D  +  +L NDY   F+++  G    ++L+Q +D E +
Sbjct: 409 DSVNLTSPLRIVALDKDIEDTKDPELHLFL-NDYTSVFTVTPTGITRFLTLLQPVDREEQ 467

Query: 109 DSYRFTVYATDTLMTTS-ATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGK 167
           D+Y F++ A D +  +   TVNI V++ ND  P F    Y +++      D++PG  + +
Sbjct: 468 DTYTFSITAFDGVQESKPVTVNIRVMDANDNTPTFPEISYNVYV----YTDMSPGDSVIQ 523

Query: 168 VEAADGDKGD--RVTLSLRGPYEKMFSIN-DSGHISIV-DLSALNTSTIQLVVVATDTGN 223
           + A D D+G    +T  +    +  F IN ++G I+I   +  +   T  L V A D   
Sbjct: 524 LTAVDADEGSNGEITYEILVGAQGDFIINKETGLITIAPGVELIVGRTYALTVQAADNAP 583

Query: 224 P 224
           P
Sbjct: 584 P 584



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 65/201 (32%), Positives = 94/201 (46%), Gaps = 26/201 (12%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDL--RVKYWL-SNDYGERFSISR-QGDISLM 100
            F+ + Y+V   ENLP     L +   K  DL   V Y + S +    F++    G +SL+
Sbjct: 812  FTNSTYTVVVEENLPAGTSFLQIEA-KDVDLGANVSYRIRSPEVKHLFALHPFTGVLSLL 870

Query: 101  QCLDYET----EDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
            + LDYE+    E S  F V A D   T+    ATV + V ++ND+ P F    Y+     
Sbjct: 871  RSLDYESFPDQEASITFLVEAFDIYGTMPPGIATVTVIVKDMNDYPPVFSKRIYK----G 926

Query: 154  IPLADLTPGSVIGKVEAADGDK----GDRVTL---SLRGPY-EKMFSIN-DSGH-ISIVD 203
            I   D   G+ I  V A D D       RV      ++ PY   +F +  DSG  I+ V+
Sbjct: 927  IVAPDAEKGTPITNVYAEDADPPGLPASRVRYRVDDVQSPYPASIFDVEEDSGRVITRVN 986

Query: 204  LSALNTSTIQLVVVATDTGNP 224
            L+   T+  +LVV+A D G P
Sbjct: 987  LNEEPTTIFKLVVIAFDDGEP 1007



 Score = 42.7 bits (99), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 52/193 (26%), Positives = 93/193 (48%), Gaps = 10/193 (5%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGER-FSISRQ-GDISLMQ 101
           +F +  YS+   E + +  VLL +         + Y + N   +R F++S   G ++L +
Sbjct: 608 RFPQLMYSLEISEAMRIGAVLLNLQATDREGDPITYAIENGDPQRVFNLSETTGILTLGK 667

Query: 102 CLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLP-HIPLADLT 160
            LD E+ D Y   V A+D     ++T  ++VV  +        P ++ +LP ++ + +  
Sbjct: 668 ALDRESTDRYILIVTASDGRPDGTSTATVNVVVTDVN---DNDPVFDPYLPRNLSVVEEE 724

Query: 161 PGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDSGHI-SIVDLSALNTSTIQLVVV 217
             + +G+V A D D G   +V  SL G +  +F I  +G I + V L        +L+VV
Sbjct: 725 ANAFVGQVRATDPDAGINGQVYYSL-GNFNHLFHITSNGSIYTTVKLDREVRDYYELLVV 783

Query: 218 ATDTGNPPRQASV 230
           ATD    PR +++
Sbjct: 784 ATDGAVHPRHSTL 796


>gi|332234442|ref|XP_003266417.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 2 [Nomascus
            leucogenys]
          Length = 4007

 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 53/193 (27%), Positives = 89/193 (46%), Gaps = 21/193 (10%)

Query: 43   LQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGER---FSISRQ-GDIS 98
            L F +  YS + +E  PVN+++  ++      L   +W +   G++   F I +  G I 
Sbjct: 1347 LAFDETYYSFTVMETDPVNHMVGVISVEGRPGL---FWFNISGGDKDMDFDIEKTTGSIV 1403

Query: 99   LMQCLDYETEDSYRFTVYATDTLMTTSATVNISVV-NVNDWDPRFRYPQYELFLPHIPLA 157
            + + LD     SY  TV  TD   T +  V+I ++ N+N   P+F    YE+ +P     
Sbjct: 1404 IARPLDTRRRLSYNLTVEVTDGSHTIATQVHIFMIANINHHRPQFLETHYEVRVPQ---- 1459

Query: 158  DLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSGHISIVDLSALNTSTIQLVVV 217
            D  PG  + +V+A D DKG  +  ++ G         D G  S+  L    +S + + V 
Sbjct: 1460 DTVPGVELLRVQAIDQDKGKSLIYTIHGS-------QDPGSASLFQLDP--SSGVLVTVG 1510

Query: 218  ATDTGNPPRQASV 230
              D G+ P Q ++
Sbjct: 1511 KLDLGSGPSQHTL 1523



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/142 (31%), Positives = 69/142 (48%), Gaps = 16/142 (11%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYG----ERFSI-SRQGD 96
            F  + Y     EN+PV   ++ VT    +  RD +V Y LS D G    E F+I S  G 
Sbjct: 2456 FEADPYKAVLTENMPVGTSVIQVTAIDKDTGRDGQVSYRLSADPGSNVHELFAIDSESGW 2515

Query: 97   ISLMQCLDYETEDSYRFTVYATD----TLMTTSATVNISVVNVNDWDPRFRYPQYELFLP 152
            I+ +Q LD ET  +Y F V A D      +++ A V +S+ + ND  PRF   +Y   + 
Sbjct: 2516 ITTLQELDCETCQTYHFHVVAYDHGQTIQLSSQALVQVSITDENDNAPRFASEEYRGSV- 2574

Query: 153  HIPLADLTPGSVIGKVEAADGD 174
               + +  PG ++  ++  D D
Sbjct: 2575 ---VENSEPGELVATLKTLDAD 2593



 Score = 55.5 bits (132), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 63/201 (31%), Positives = 86/201 (42%), Gaps = 20/201 (9%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTT------NKPRDLRVKYWLSNDYGERFSISRQGD- 96
            +F+  EY  S +EN     ++ T+ T       + R +   Y    D   +F IS+ GD 
Sbjct: 2564 RFASEEYRGSVVENSEPGELVATLKTLDADISEQNRQVTC-YITEGDPLGQFGISQVGDE 2622

Query: 97   --ISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHI 154
              IS  + LD E    Y   V A+D     S TV I V++VND  P+      +L     
Sbjct: 2623 WRISSRKTLDREHTAKYLLRVTASDGKFQASVTVEIFVLDVNDNSPQCS----QLLYTGK 2678

Query: 155  PLADLTPGSVIGKVEAA--DGDKGDRVTLSLRGPYEKMFSINDSGHISIVDLSALNTS-- 210
               D+ PG  I KV A   D D   ++T SL GP    F + D     +  L+AL+    
Sbjct: 2679 VHEDVFPGHFILKVSATDLDTDTNAQITYSLHGPGAHEFKL-DPHTGELTTLTALDRERK 2737

Query: 211  -TIQLVVVATDTGNPPRQASV 230
                LV  ATD G    QA V
Sbjct: 2738 DVFNLVAKATDGGGRSCQADV 2758



 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 49/143 (34%), Positives = 75/143 (52%), Gaps = 11/143 (7%)

Query: 95   GDISLMQCLDYETEDSYRFTVYATD----TLMTTSATVNISVVNVNDWDPRFRYPQYELF 150
            G +S  Q LD E +D +   V   D    +L +TS  V + +++VND  P F +  + + 
Sbjct: 1192 GLLSTAQQLDRENKDEHILEVTVLDNGEPSLKSTSRVV-VGILDVNDNPPVFSHKLFNVR 1250

Query: 151  LPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIND-SGHISIVDLSAL 207
            LP   L+ ++PG V  ++ A+D D+G   RVT S+    E+ FSI+  +G +S       
Sbjct: 1251 LPER-LSPVSPGPVY-RLVASDLDEGLNGRVTYSIEDSDEEAFSIDPVTGVVSSSSTFTA 1308

Query: 208  NTSTIQLVVVATDTGNPPRQASV 230
                I L + ATD+G PP  ASV
Sbjct: 1309 GEYNI-LTIKATDSGQPPLSASV 1330



 Score = 48.9 bits (115), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 58/228 (25%), Positives = 100/228 (43%), Gaps = 25/228 (10%)

Query: 28   LATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWL--S 82
            + T++V+    +    QF ++ YS   LEN  V  V+LTV+    + P +  + Y L   
Sbjct: 2963 VTTVMVNITDVNEHRPQFPQDPYSTRVLENALVGDVILTVSATDEDGPLNSDITYSLVGG 3022

Query: 83   NDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWD 139
            N  G      ++G++ + + LD E   SY   + ATD+    +     + I V +VND  
Sbjct: 3023 NQLGHFTIHPKKGELQVAKALDREQASSYSLKLRATDSGQPPLHEDTDIAIQVADVNDNP 3082

Query: 140  PRFRYPQYELFLPHIPLADLTP-GSVIGKVEAADGDKGD-------RVTLSLRGPYEKMF 191
            PRF    Y        + + +P GS + ++  +D D  +       R+T   +G     F
Sbjct: 3083 PRFFQLNYS-----TTVQENSPIGSKVLQLILSDPDSPENGPPYSFRIT---KGNNGSAF 3134

Query: 192  SINDSGHISIVD-LSALNTSTIQLVVVATDTGNPPRQASVPAIMHFPE 238
             +   G +   + L+       QL + A+D+G PP  +S    +H  E
Sbjct: 3135 RVTPDGWLVTAEGLNRRAQEWYQLQIQASDSGIPPLSSSTSVRVHVTE 3182



 Score = 46.6 bits (109), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 65/242 (26%), Positives = 103/242 (42%), Gaps = 21/242 (8%)

Query: 10   PITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTT 69
            P TL V+A    +   + LAT+I+    +      FSK+EY V   E++PV   +L V+ 
Sbjct: 1625 PHTLTVKAEDQGSPQWHDLATVIIHVYPSDRSAPLFSKSEYFVEIPESIPVGSPILLVSA 1684

Query: 70   NKPRDLRVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDTLMT-TSATV 128
                ++  +    N  G     S  G IS  + LD+E   SY+  +  ++     T   V
Sbjct: 1685 MSSSEVTYELREGNKDGVFSMNSYSGLISTQKNLDHEKISSYQLKIRGSNMAGAFTDVMV 1744

Query: 129  NISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGK------VEAADGDKGDRVTLS 182
             + +++ ND  P F       F+  I  A      ++ K      + A+D DK     L 
Sbjct: 1745 VVDIIDENDNAPMFL---KSTFVGQISEAAPLYSMIMDKNNNPFVIHASDSDKEANSLLV 1801

Query: 183  ---LRGPYEKMFSINDS-GHISIV-DLSALNTSTIQLVVVATDTGNP----PRQASVPAI 233
               L     K F I+ S G ++IV ++   +  + Q  V   D G+P    PR A V  I
Sbjct: 1802 YKILEPEALKFFKIDPSMGTLTIVSEMDYESMPSFQFCVYVHDQGSPILFSPRPAQV--I 1859

Query: 234  MH 235
            +H
Sbjct: 1860 IH 1861



 Score = 42.0 bits (97), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 63/229 (27%), Positives = 99/229 (43%), Gaps = 18/229 (7%)

Query: 10   PITLVVRAIQYDNQDRYA-LATLIVSKAGTSLRELQFSKNEYSVSALENLPVN-YVLLTV 67
            P+ L VRA         + L T+ VS  G       F   E+SV   E+ P    VL   
Sbjct: 2841 PLELTVRASDLGTPIPLSTLGTVTVSVVGLEDYLPVFLNTEHSVQVPEDAPPGTEVLQLA 2900

Query: 68   TTNKPRDLRVKYWL--SNDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDTLMTT 124
            T  +P   +  Y +   N+ G RF + +R G + +   LD+ET   Y  ++  +    ++
Sbjct: 2901 TLTRPGAEKTGYRVVSGNEQG-RFRLDARTGILYVNASLDFETSPKYFLSIECSRKSSSS 2959

Query: 125  S---ATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDK--GDRV 179
                 TV +++ +VN+  P+F    Y   +    L +   G VI  V A D D      +
Sbjct: 2960 LSDVTTVMVNITDVNEHRPQFPQDPYSTRV----LENALVGDVILTVSATDEDGPLNSDI 3015

Query: 180  TLSLRGPYE-KMFSIN-DSGHISIVD-LSALNTSTIQLVVVATDTGNPP 225
            T SL G  +   F+I+   G + +   L     S+  L + ATD+G PP
Sbjct: 3016 TYSLVGGNQLGHFTIHPKKGELQVAKALDREQASSYSLKLRATDSGQPP 3064



 Score = 41.6 bits (96), Expect = 0.71,   Method: Compositional matrix adjust.
 Identities = 42/154 (27%), Positives = 71/154 (46%), Gaps = 15/154 (9%)

Query: 51  SVSALENLPVNYVLLTVTTNKPR---DLRVKYWLSNDYGER-FSISRQ-GDISLMQCLDY 105
           S+  LE++P+N  L  +    P    + ++ Y +++   E  F I  + G +++   LDY
Sbjct: 721 SIDVLESVPINTPLARLAATDPDAGFNGKLVYVIADGNEEGCFDIELETGLLTVAAPLDY 780

Query: 106 ETEDSYRFTVYATDTLMTTSATVNISVVNVNDWD---PRFRYPQYELFLPHIPLADLTPG 162
           E  + Y   V   D      ++  +  VNV DW+   PRF    Y+L +      D   G
Sbjct: 781 EATNFYILNVTVYDLGTPQKSSWKLLTVNVKDWNDNAPRFPPGGYQLTISE----DTEVG 836

Query: 163 SVIGKVEAADGDKGD--RVTLSLRGPYEKMFSIN 194
           + + ++   D D  D  RV  +L  P EK FS++
Sbjct: 837 TTVAELTTKDADSEDNGRVRYTLLSPTEK-FSLH 869



 Score = 40.8 bits (94), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 39/133 (29%), Positives = 68/133 (51%), Gaps = 14/133 (10%)

Query: 95   GDISLMQCLDYETEDSYRFTVYATDT-----LMTTSATVNISVVNVNDWDPRFRYPQYEL 149
            G ++++  +DYE+  S++F VY  D           A V I V +VND  PRF    YE+
Sbjct: 1820 GTLTIVSEMDYESMPSFQFCVYVHDQGSPILFSPRPAQVIIHVRDVNDSPPRFSEQIYEV 1879

Query: 150  FLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSIND-SGHISIVDLSAL 207
             +    +  + PG  +  V A+D D    V  S++ G  ++  +I+  +G IS+++ + L
Sbjct: 1880 AI----VGPIHPGMELLMVRASDEDS--EVNYSIKTGNADEAVTIHPVTGSISVLNPAFL 1933

Query: 208  NTSTIQLVVVATD 220
              S  +L + A+D
Sbjct: 1934 GLSR-KLTIRASD 1945


>gi|119623184|gb|EAX02779.1| hCG1797565, isoform CRA_c [Homo sapiens]
          Length = 1045

 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 76/274 (27%), Positives = 119/274 (43%), Gaps = 40/274 (14%)

Query: 45  FSKNEYSVSALENLPVNYV--LLTVTTNKPRDLRVKYWLSNDYGERFSISRQ-GDISLMQ 101
           F+ NEY     ENLP +    L+TVT     D         D  + F+I  Q G I    
Sbjct: 599 FTHNEYKFYVPENLPRHGTVGLITVTDPDYGDNSAVTLSILDENDDFTIDSQTGVIRPNI 658

Query: 102 CLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYP----QYELFLPHI 154
             D E ++SY F V A D      ++SA V I+VV+VND  P F  P     YEL LP  
Sbjct: 659 SFDREKQESYTFYVKAEDGGRVSRSSSAKVTINVVDVNDNKPVFIVPPSNCSYELVLPST 718

Query: 155 PLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-DSGHISIVDLSALNTS 210
                 PG+V+ +V A D D G    +    + G    +F+I+ ++G+I++++   +   
Sbjct: 719 -----NPGTVVFQVIAVDNDTGMNAEVRYSIVGGNTRDLFAIDQETGNITLMEKCDVTDL 773

Query: 211 TIQLVVV-ATDTGNPPRQASVPAIMHFPEAIVQQAS--------------------SKLN 249
            +  V+V A D G P    SV  +  F    V  A+                    + ++
Sbjct: 774 GLHRVLVKANDLGQPDSLFSVVIVNLFVNESVTNATLINELVRKSTEAPVTPNTEIADVS 833

Query: 250 SGTSSTVLIILGVVLIVLGFVIILLILYIHKNKH 283
           S TS  V I++  V   +  V+++ I  + + + 
Sbjct: 834 SPTSDYVKILVAAVAGTITVVVVIFITAVVRCRQ 867



 Score = 58.5 bits (140), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 37/114 (32%), Positives = 62/114 (54%), Gaps = 10/114 (8%)

Query: 76  RVKYWLSNDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNIS 131
           ++ Y L  D    FS+  R G +++++ LD E ED Y FT+ A D     +T++ TV +S
Sbjct: 529 KINYLLGPDAPPEFSLDCRTGMLTVVKKLDREKEDKYLFTILAKDNGVPPLTSNVTVFVS 588

Query: 132 VVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDR--VTLSL 183
           +++ ND  P F + +Y+ ++P     +L     +G +   D D GD   VTLS+
Sbjct: 589 IIDQNDNSPVFTHNEYKFYVPE----NLPRHGTVGLITVTDPDYGDNSAVTLSI 638



 Score = 38.1 bits (87), Expect = 6.9,   Method: Compositional matrix adjust.
 Identities = 36/139 (25%), Positives = 67/139 (48%), Gaps = 15/139 (10%)

Query: 103 LDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADL 159
           LD E +D+Y   V   D      +++A + +SV + ND  P F+  + E+ +P     + 
Sbjct: 236 LDREEKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVFKETEIEVSIPE----NA 291

Query: 160 TPGSVIGKVEAADGDKGDRVTLS------LRGPYEKMFSIN-DSGHISIVD-LSALNTST 211
             G+ + ++ A D D G+   +       +     ++F +N  +G I+I + L    T  
Sbjct: 292 PVGTSVTQLHATDADIGENAKIHFSFSNLVSNIARRLFHLNATTGLITIKEPLDREETPN 351

Query: 212 IQLVVVATDTGNPPRQASV 230
            +L+V+A+D G  P +A V
Sbjct: 352 HKLLVLASDGGLMPARAMV 370


>gi|119623185|gb|EAX02780.1| hCG1797565, isoform CRA_d [Homo sapiens]
          Length = 1115

 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 76/274 (27%), Positives = 119/274 (43%), Gaps = 40/274 (14%)

Query: 45  FSKNEYSVSALENLPVNYV--LLTVTTNKPRDLRVKYWLSNDYGERFSISRQ-GDISLMQ 101
           F+ NEY     ENLP +    L+TVT     D         D  + F+I  Q G I    
Sbjct: 570 FTHNEYKFYVPENLPRHGTVGLITVTDPDYGDNSAVTLSILDENDDFTIDSQTGVIRPNI 629

Query: 102 CLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYP----QYELFLPHI 154
             D E ++SY F V A D      ++SA V I+VV+VND  P F  P     YEL LP  
Sbjct: 630 SFDREKQESYTFYVKAEDGGRVSRSSSAKVTINVVDVNDNKPVFIVPPSNCSYELVLPST 689

Query: 155 PLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-DSGHISIVDLSALNTS 210
                 PG+V+ +V A D D G    +    + G    +F+I+ ++G+I++++   +   
Sbjct: 690 -----NPGTVVFQVIAVDNDTGMNAEVRYSIVGGNTRDLFAIDQETGNITLMEKCDVTDL 744

Query: 211 TIQLVVV-ATDTGNPPRQASVPAIMHFPEAIVQQAS--------------------SKLN 249
            +  V+V A D G P    SV  +  F    V  A+                    + ++
Sbjct: 745 GLHRVLVKANDLGQPDSLFSVVIVNLFVNESVTNATLINELVRKSTEAPVTPNTEIADVS 804

Query: 250 SGTSSTVLIILGVVLIVLGFVIILLILYIHKNKH 283
           S TS  V I++  V   +  V+++ I  + + + 
Sbjct: 805 SPTSDYVKILVAAVAGTITVVVVIFITAVVRCRQ 838



 Score = 58.2 bits (139), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 37/114 (32%), Positives = 62/114 (54%), Gaps = 10/114 (8%)

Query: 76  RVKYWLSNDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNIS 131
           ++ Y L  D    FS+  R G +++++ LD E ED Y FT+ A D     +T++ TV +S
Sbjct: 500 KINYLLGPDAPPEFSLDCRTGMLTVVKKLDREKEDKYLFTILAKDNGVPPLTSNVTVFVS 559

Query: 132 VVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDR--VTLSL 183
           +++ ND  P F + +Y+ ++P     +L     +G +   D D GD   VTLS+
Sbjct: 560 IIDQNDNSPVFTHNEYKFYVPE----NLPRHGTVGLITVTDPDYGDNSAVTLSI 609



 Score = 38.1 bits (87), Expect = 7.8,   Method: Compositional matrix adjust.
 Identities = 36/139 (25%), Positives = 67/139 (48%), Gaps = 15/139 (10%)

Query: 103 LDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADL 159
           LD E +D+Y   V   D      +++A + +SV + ND  P F+  + E+ +P     + 
Sbjct: 207 LDREEKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVFKETEIEVSIPE----NA 262

Query: 160 TPGSVIGKVEAADGDKGDRVTLS------LRGPYEKMFSIN-DSGHISIVD-LSALNTST 211
             G+ + ++ A D D G+   +       +     ++F +N  +G I+I + L    T  
Sbjct: 263 PVGTSVTQLHATDADIGENAKIHFSFSNLVSNIARRLFHLNATTGLITIKEPLDREETPN 322

Query: 212 IQLVVVATDTGNPPRQASV 230
            +L+V+A+D G  P +A V
Sbjct: 323 HKLLVLASDGGLMPARAMV 341


>gi|354494436|ref|XP_003509343.1| PREDICTED: cadherin-23 [Cricetulus griseus]
          Length = 3233

 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 58/195 (29%), Positives = 90/195 (46%), Gaps = 20/195 (10%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWLSNDYGERFSIS-RQGDISLM 100
            F +  Y  +  E++ V  V+L VT           ++Y L +  G +F+I+   GDI ++
Sbjct: 2281 FDQPSYQEAVFEDVAVGTVILRVTATDADSGNFALIEYSLGDGEG-KFAINPNTGDIYVL 2339

Query: 101  QCLDYETEDSYRFTVYATDT-------LMTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
              LD E +D Y  T  A D            S  V I V++VND  P+F  PQ+   +  
Sbjct: 2340 SSLDREKKDHYILTALAKDNPGDVASNRRENSVQVVIQVLDVNDCRPQFSKPQFSTSV-- 2397

Query: 154  IPLADLTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSIN-DSGHISIVDLSALNTS 210
                +   G+ +  + A D D+G   ++T SL GP  + F ++ DSG ++       +  
Sbjct: 2398 --YENEPAGTSVITMLATDQDEGSNGQLTYSLEGPGMEAFFVDMDSGLVT-TQRPLQSYE 2454

Query: 211  TIQLVVVATDTGNPP 225
               L VVATD G PP
Sbjct: 2455 RFNLTVVATDGGEPP 2469



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 65/210 (30%), Positives = 98/210 (46%), Gaps = 28/210 (13%)

Query: 45  FSKNEYSVSALENLPVNYVLLTV--TTNKPRDL-RVKYWLSNDYGERFSISRQ-GDISLM 100
           FS+  Y+VS  EN+ V   +LTV  T N       V Y+ S+D  +RFS+ +  G I L+
Sbjct: 339 FSQPLYNVSLYENITVGTSVLTVLATDNDVGTFGEVNYFFSDD-PDRFSLDKDTGLIVLI 397

Query: 101 QCLDYETEDSYRFTVYATDTL-MTTSATVNISVVNVNDWDPRFRYPQYELFL----PHIP 155
             LDYE    +  TV A D     T+  V I+V++VND  P F+   Y   L    P + 
Sbjct: 398 ARLDYELIQRFTLTVIARDGGGEETTGRVRINVLDVNDNVPTFQKDAYVGALRENEPSV- 456

Query: 156 LADLTPGSVIGKVEAADGDK--GDRVTLSL-----RGPYEKMFSINDSGHISI---VDLS 205
                  + + ++ A D D    +++T S+      G Y  +      G IS+   +D  
Sbjct: 457 -------TQLVRLRATDEDSPPNNQITYSIVNASAFGSYFDISVYEGYGVISVSRPLDYE 509

Query: 206 ALNTSTIQLVVVATDTGNPPRQASVPAIMH 235
            +    I L V+A D GNPP  ++VP  + 
Sbjct: 510 QIPNGLIYLTVMAKDAGNPPLYSTVPVTIE 539



 Score = 51.6 bits (122), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 66/218 (30%), Positives = 101/218 (46%), Gaps = 44/218 (20%)

Query: 45  FSKNEYSVSALENLPVNY-VLLTVTTNKPRDLRVKYWLSNDYGE-----------RFSI- 91
           FSK  Y VS +EN+     VL    T+  R        S +YG+           +F I 
Sbjct: 550 FSKPAYFVSVVENIMAGATVLFLNATDLDR--------SREYGQESIIYSLEGSSQFRIN 601

Query: 92  SRQGDISLMQCLDYETEDSYRFTVYATD-----TLMTTSATVNISVVNVNDWDPRFRYPQ 146
           +R G+I+    LD ET+  Y   V A D        T  ATVN++++++ND  P ++   
Sbjct: 602 ARSGEITTTSLLDRETKSEYILIVRAVDGGVGHNQKTGIATVNVTLLDINDNHPTWKDAP 661

Query: 147 YELFLPHIPLADLT-PGSVIGKVEAADGDKGDRVTL--SLRGPYEKMFSIND-SGHIS-- 200
           Y     +I L ++T P S +  V A D D G+  TL  S++ P  K +S+N  +G I   
Sbjct: 662 Y-----YINLVEMTPPDSDVTTVVAVDPDLGENGTLVYSIQPP-NKFYSLNSTTGKIRTT 715

Query: 201 --IVDLSALNTSTIQL----VVVATDTGNPPRQASVPA 232
             ++D    +    +L    +V  TD G PP +A+  A
Sbjct: 716 HVMLDRENPDPEEAELMRKIIVSVTDCGRPPLKATSSA 753



 Score = 47.8 bits (112), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 57/211 (27%), Positives = 94/211 (44%), Gaps = 28/211 (13%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVT-TNKPRDL--RVKYWLSNDYGERFSISRQGDISLM- 100
            FS   Y+V  LEN P  + +L VT T++   L   + Y +     +RF I     +  + 
Sbjct: 1948 FSPAAYTVHLLENCPPGFSVLQVTATDEDSGLNGELVYRIEAGAQDRFLIHPATGVIYVG 2007

Query: 101  -QCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
               +D E ++SYR TV ATD     ++ +A + I + ++ND  P F  P   + +    L
Sbjct: 2008 NATIDREEQESYRLTVVATDRGTVPLSGTAIITILIDDINDSRPEFLNPIQTVSV----L 2063

Query: 157  ADLTPGSVIGKVEAADGDKGDRV------------TLSLRGPYEKMFSIN-DSGHISI-- 201
                PG+VI  V A D D   ++            T  L    E  F++N ++G + +  
Sbjct: 2064 ESAEPGTVIANVTAIDLDLDPKLEYHIISIVAKDDTDCLVPDQEDAFAVNINTGSVMVKS 2123

Query: 202  -VDLSALNTSTIQLVVVATDTGNPPRQASVP 231
             ++   + T  + L V+   +  P R  SVP
Sbjct: 2124 PLNRELVATYEVTLSVIDNASDLPERSVSVP 2154



 Score = 46.2 bits (108), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 57/203 (28%), Positives = 87/203 (42%), Gaps = 23/203 (11%)

Query: 43   LQFSKNEYSVSALENLPVNYVLLTVTTNKPRDL-----RVKYWLSNDYGERFSISR-QGD 96
            +QFS   Y    +ENL +   ++ V      +L     R   + S      F I    G 
Sbjct: 1190 VQFSNASYEAVIMENLALGTEIVRVQAYSIDNLNQITYRFDAYTSAQAKALFKIDAITGV 1249

Query: 97   ISLMQCLDYETEDSYRFTVYATDTLMTTSATVN--ISVVNVNDWDPRFRYPQYELFLPHI 154
            I++   +D E  D Y  TV A D      +TV   I+V++ ND  PRF +         +
Sbjct: 1250 ITVKGLVDREKGDFYTLTVVADDGGPKVDSTVKVYITVLDENDNSPRFDFTSDSAI--SV 1307

Query: 155  PLADLTPGSVIGKVEAADGDKGD--RVTLSLR-----GPYEKMFSINDSGHISI---VDL 204
            P  D   G  +  V+A D D G   +V  SL      G +E + S +  G + +   +D 
Sbjct: 1308 P-EDCPVGQRVATVKARDPDAGSNGQVVFSLASGNIAGAFEIVTSNDSIGEVFVAKPLDR 1366

Query: 205  SALNTSTIQLVVVATDTGNPPRQ 227
              L+   ++  VVA+D G PPR+
Sbjct: 1367 EELDHYILK--VVASDCGTPPRK 1387



 Score = 43.1 bits (100), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 54/199 (27%), Positives = 89/199 (44%), Gaps = 26/199 (13%)

Query: 44  QFSKNEYSVSALENLPVNYVL--LTVTTNKPRDLRV----KYWLSNDYGERF-----SIS 92
           +F+ +EYSV+  E   V + L       +K  +L +    + +L  +    F     S+ 
Sbjct: 226 EFNSSEYSVAITELAQVGFALPLFIQVVDKDENLGLNSMFEVYLVGNNSHHFIISPTSVQ 285

Query: 93  RQGDISLMQC--LDYETEDSYRFTVYATDTL--MTTSATVNISVVNVNDWDPRFRYPQYE 148
            + DI +     LDYET D Y F ++A +++      A V I+++N ND  P F  P Y 
Sbjct: 286 GKADIRIRVAIPLDYETVDRYDFDLFANESVPDHVGYAKVKITLINENDNRPIFSQPLYN 345

Query: 149 LFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDSGHISIVDLSA 206
           + L      ++T G+ +  V A D D G    V        ++     D+G I ++  + 
Sbjct: 346 VSL----YENITVGTSVLTVLATDNDVGTFGEVNYFFSDDPDRFSLDKDTGLIVLI--AR 399

Query: 207 LNTSTIQ---LVVVATDTG 222
           L+   IQ   L V+A D G
Sbjct: 400 LDYELIQRFTLTVIARDGG 418



 Score = 43.1 bits (100), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 40/137 (29%), Positives = 64/137 (46%), Gaps = 29/137 (21%)

Query: 65   LTVTTNKPRDLRVKYWLS---NDYG---------------ERFSIS-RQGDISLMQCLDY 105
            ++V+ + PR+ RV  WL+   ND G                +FS+  R   +  +  LD 
Sbjct: 881  VSVSEDVPREFRV-VWLNCTDNDVGLNAELSYFITGGNVDGKFSVGYRDAVVRTVVGLDR 939

Query: 106  ETEDSYRFTVYATDT-----LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLT 160
            ET  +Y   + A D        T +ATV ++V++VND  P F    YE  +P     D+ 
Sbjct: 940  ETTAAYTLVLEAIDNGPVGKRRTGTATVFVTVLDVNDNRPIFLQSSYEASVPE----DIP 995

Query: 161  PGSVIGKVEAADGDKGD 177
             G  I +++A D D+G+
Sbjct: 996  EGHSIVQLKATDADEGE 1012



 Score = 42.7 bits (99), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 32/94 (34%), Positives = 49/94 (52%), Gaps = 11/94 (11%)

Query: 89  FSI-SRQGDISLMQCLDYETEDSYRFTVYATDT----LMTTSATVNISVVNVNDWDPRF- 142
           F+I S +G +++++ LDYE   +Y+ TV ATD      ++T A + I + +V D DP F 
Sbjct: 57  FAIDSARGIVTVIRELDYEVTQAYQLTVNATDQDKTRPLSTLANLAIIITDVQDMDPIFI 116

Query: 143 RYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG 176
             P       H P     PG+ +  + A D DKG
Sbjct: 117 NLPYSTNIYEHSP-----PGTTVRVITAVDQDKG 145



 Score = 42.4 bits (98), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 38/122 (31%), Positives = 60/122 (49%), Gaps = 11/122 (9%)

Query: 92   SRQGDISLMQCLDYETEDSYRFTVYATDTLMTTSAT---VNISVVNVNDWDPRFRYPQYE 148
            S  G +   + +DYE      FTV A+D      A    V + +V++ND +P F  P Y+
Sbjct: 2228 SSAGKVIANRTVDYEEVHWLNFTVRASDNGSPPRAAEIPVYLEIVDINDNNPIFDQPSYQ 2287

Query: 149  LFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSIN-DSGHISIVDLSA 206
              +      D+  G+VI +V A D D G+   +    G  E  F+IN ++G I +  LS+
Sbjct: 2288 EAV----FEDVAVGTVILRVTATDADSGNFALIEYSLGDGEGKFAINPNTGDIYV--LSS 2341

Query: 207  LN 208
            L+
Sbjct: 2342 LD 2343


>gi|348583147|ref|XP_003477335.1| PREDICTED: protocadherin-1-like [Cavia porcellus]
          Length = 1237

 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 52/149 (34%), Positives = 71/149 (47%), Gaps = 11/149 (7%)

Query: 89  FSISRQ-GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRY 144
           FSIS + G+I +   LD E  DSY   V A D     +  +ATV I+V++ ND DP+F  
Sbjct: 555 FSISPENGEIRVKTSLDREQRDSYELKVVAADRGSPSLKGTATVLINVLDCNDNDPKFML 614

Query: 145 PQYELFLPHIPLADLTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSINDSGHI-SI 201
             Y   +    + ++   S +G V   DGDKG+  RV LS+          N +G I S 
Sbjct: 615 SGYNFSV----MENMPALSPVGMVTVIDGDKGENARVQLSVEQDNGDFVIQNGTGTILSS 670

Query: 202 VDLSALNTSTIQLVVVATDTGNPPRQASV 230
           +       ST    + A D G PPR A V
Sbjct: 671 LSFDREQQSTYTFQLKAVDGGVPPRSAYV 699



 Score = 46.6 bits (109), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 63/253 (24%), Positives = 106/253 (41%), Gaps = 38/253 (15%)

Query: 14  VVRAIQYDNQDRYALATLIVSKAGTSLR---------------ELQFSKNEYSVSALENL 58
           V  ++  + +D Y L  +   +   SL+               + +F  + Y+ S +EN+
Sbjct: 566 VKTSLDREQRDSYELKVVAADRGSPSLKGTATVLINVLDCNDNDPKFMLSGYNFSVMENM 625

Query: 59  PVNYVLLTVTT---NKPRDLRVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTV 115
           P    +  VT    +K  + RV+  +  D G+    +  G I      D E + +Y F +
Sbjct: 626 PALSPVGMVTVIDGDKGENARVQLSVEQDNGDFVIQNGTGTILSSLSFDREQQSTYTFQL 685

Query: 116 YATDTLMTTSAT---VNISVVNVNDWDPRFRYPQ---YELFLPHIPLADLTPGSVIGKVE 169
            A D  +   +    V I+V++ ND  P    P    + L  P   L     G  + +V 
Sbjct: 686 KAVDGGVPPRSAYVGVTINVLDENDNAPFITAPSNTSHRLLTPQTRL-----GETVSQVT 740

Query: 170 AADGDKGDRVTL--SLRG--PYEKMFSIN-DSGHISI-VDLSALNTSTIQLVVVATDTGN 223
           A D D G    L  S+ G  PY  +F I   SG I++  ++   +    +LVV  +D G 
Sbjct: 741 AEDIDSGVNAELIYSIAGGNPY-GLFQIGPHSGAITLEKEIERRHHGLHRLVVKVSDRGK 799

Query: 224 PPRQASVPAIMHF 236
           PPR  +  A++H 
Sbjct: 800 PPRYGT--ALVHL 810



 Score = 46.2 bits (108), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 37/131 (28%), Positives = 63/131 (48%), Gaps = 13/131 (9%)

Query: 103 LDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADL 159
           LDYE    Y   + A D+    ++++ ++ + VV++ND  P F     E+  P     + 
Sbjct: 464 LDYEKVKDYTIEIVAVDSGNPPLSSTNSLKVQVVDINDNAPVFTQSVTEVAFPE----NN 519

Query: 160 TPGSVIGKVEAADGDKGDRV----TLSLRGPYEKMFSIN-DSGHISI-VDLSALNTSTIQ 213
            PG V+ +V A+D D G       +L      + +FSI+ ++G I +   L      + +
Sbjct: 520 KPGEVVAEVTASDADSGSNAELVYSLEPEPAAQGLFSISPENGEIRVKTSLDREQRDSYE 579

Query: 214 LVVVATDTGNP 224
           L VVA D G+P
Sbjct: 580 LKVVAADRGSP 590



 Score = 43.9 bits (102), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 43/152 (28%), Positives = 73/152 (48%), Gaps = 26/152 (17%)

Query: 93  RQGDISLMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYEL 149
           +Q  + +M  LD E  DSY   +   D       +SA + ++V++ ND  P+F  P YE 
Sbjct: 228 KQPQLIVMGNLDRERRDSYDLNIRVQDGGSPPRASSALLRVTVLDTNDNAPKFERPSYE- 286

Query: 150 FLPHIPLADLTPGSVIG----KVEAADGDKGDRVTLSL---RGP--YEKMFSIN-DSGHI 199
                  A+L+  S IG    +V+A D D+G    +     + P    ++  ++ ++G I
Sbjct: 287 -------AELSENSPIGHSVIQVKANDSDQGANAEIDYTFHQAPEVVRRLLRLDRNTGLI 339

Query: 200 SI---VDLSALNTSTIQLVVVATDTGNPPRQA 228
           ++   VD   L  ST++  V+A D G  P+ A
Sbjct: 340 TVQGPVDREDL--STLRFSVLAKDRGANPKSA 369


>gi|344275029|ref|XP_003409316.1| PREDICTED: protocadherin-15 isoform 10 [Loxodonta africana]
          Length = 1676

 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 67/242 (27%), Positives = 112/242 (46%), Gaps = 29/242 (11%)

Query: 6   DFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVL- 64
           DF Q   LV++A Q +     A A+L +     + +   F+   Y    LE+ PV   + 
Sbjct: 356 DFHQKFDLVIKAEQDNGHPLPAFASLHIEILDENNQSPYFTMPAYQGYILESAPVGSTIS 415

Query: 65  --LTVTT-----------NKPRDLRVKYWLSNDYGERFSISRQG---DISLMQCLDYETE 108
             L +TT              +D  V  +L NDY   F++++ G    ++L+Q +D E +
Sbjct: 416 DSLNLTTPLRIIVLDKDVEDTKDPEVHLFL-NDYTSVFTVTQTGITRYLTLLQPVDREEQ 474

Query: 109 DSYRFTVYATDTLMTTSAT-VNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGK 167
            +Y F++ A D +  +    VNI V++ ND  P F    YE+++      D++PG  + +
Sbjct: 475 QTYTFSITAFDGVQESEPVIVNIQVMDANDNTPTFPEISYEVYV----YTDMSPGDSVIQ 530

Query: 168 VEAADGDKGD--RVTLSLRGPYEKMFSIND-SGHISIV-DLSALNTSTIQLVVVATDTGN 223
           + A D D+G    +T  +    +  F IN  +G I+I   +  +   T  L V A D  N
Sbjct: 531 LTAVDADEGSNGEITYEILVGDQGDFIINKTTGLITIAPGVELIVGRTYALTVQAAD--N 588

Query: 224 PP 225
           PP
Sbjct: 589 PP 590



 Score = 48.9 bits (115), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 70/233 (30%), Positives = 102/233 (43%), Gaps = 26/233 (11%)

Query: 13   LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKP 72
            LVV A       R++  TL +           F+ + Y+V   ENLP     L +   K 
Sbjct: 787  LVVVATDGAVHPRHSTLTLAIKVLDIDDNSPVFTNSTYTVVVEENLPAGTTFLKIEA-KD 845

Query: 73   RDL--RVKYWLSNDYGERFSISR--QGDISLMQCLDYET----EDSYRFTVYATD---TL 121
             DL   V Y + +   + F       G++SL++ LDYE     E +  F V A D   T+
Sbjct: 846  VDLGANVSYRIRSPEVKHFFALHPFTGELSLLRSLDYEAFPEQEATITFLVEAFDIYGTM 905

Query: 122  MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDK----GD 177
                ATV + V ++ND+ P F    Y+  +      D   G+ I  V A D D       
Sbjct: 906  PPGIATVTVIVKDMNDYPPVFNKRIYKGMV----APDAVKGTPITTVYAEDADPPGLPAS 961

Query: 178  RVTL---SLRGPY-EKMFSI-NDSGH-ISIVDLSALNTSTIQLVVVATDTGNP 224
            RV      ++ PY   +F +  DSG  I+ V+L+   T+  +LVVVA D G P
Sbjct: 962  RVRYRVDDVQFPYPASIFDVVEDSGLVITRVNLNEEPTTIFKLVVVAFDDGEP 1014



 Score = 46.6 bits (109), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 53/193 (27%), Positives = 94/193 (48%), Gaps = 10/193 (5%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGER-FSISRQ-GDISLMQ 101
           +F +  YS+   E + +  VLL +         + Y + N   +R F++S   G ++L +
Sbjct: 615 RFPQLMYSLEISEAMRIGAVLLNLQATDREGDPITYAIENGDPQRVFNLSENTGILTLGK 674

Query: 102 CLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLP-HIPLADLT 160
            LD E+ D Y   V A+D     ++T  ++VV  +        P ++ +LP ++ + +  
Sbjct: 675 ALDRESTDRYILIVTASDGRPDGTSTATVNVVVTDV---NDNAPVFDPYLPRNLSVVEEE 731

Query: 161 PGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDSGHI-SIVDLSALNTSTIQLVVV 217
             + +G+V A D D G   +V  SL G +  +F I  +G I + V L+       +LVVV
Sbjct: 732 ANAFVGQVRATDPDAGINGQVHYSL-GNFNNLFRITSNGSIYTAVKLNREVRDYYELVVV 790

Query: 218 ATDTGNPPRQASV 230
           ATD    PR +++
Sbjct: 791 ATDGAVHPRHSTL 803



 Score = 45.8 bits (107), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 50/171 (29%), Positives = 80/171 (46%), Gaps = 17/171 (9%)

Query: 76  RVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDTLMT---TSATVNISV 132
           +V Y L N +   F I+  G I     L+ E  D Y   V ATD  +    ++ T+ I V
Sbjct: 751 QVHYSLGN-FNNLFRITSNGSIYTAVKLNREVRDYYELVVVATDGAVHPRHSTLTLAIKV 809

Query: 133 VNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEK-MF 191
           ++++D  P F    Y + +      +L  G+   K+EA D D G  V+  +R P  K  F
Sbjct: 810 LDIDDNSPVFTNSTYTVVVEE----NLPAGTTFLKIEAKDVDLGANVSYRIRSPEVKHFF 865

Query: 192 SIND-SGHISI---VDLSAL--NTSTIQLVVVATDTGN--PPRQASVPAIM 234
           +++  +G +S+   +D  A     +TI  +V A D     PP  A+V  I+
Sbjct: 866 ALHPFTGELSLLRSLDYEAFPEQEATITFLVEAFDIYGTMPPGIATVTVIV 916


>gi|363745768|ref|XP_426993.3| PREDICTED: protocadherin beta-15-like, partial [Gallus gallus]
          Length = 461

 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 51/199 (25%), Positives = 87/199 (43%), Gaps = 27/199 (13%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRDL---RVKYWLSNDYGERFSI----SRQGDI 97
           F++  Y    LEN P   V+L V  N   +     + Y  S   G R S+    S+ G+I
Sbjct: 112 FTQKVYIGHVLENAPEGSVVLRVVANDADEGVNGDISYQFSQSVGHRHSLFTINSKTGEI 171

Query: 98  SLMQCLDYETEDSYRFTVYATD-TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
            + + LD+ETE  +  TV A D   +++   V + V++VND  P      +   +    L
Sbjct: 172 GIAKPLDFETEKKHELTVQAIDGGGLSSMCNVIVEVLDVNDNAPEIMVSSFNSPI----L 227

Query: 157 ADLTPGSVIGKVEAADGDKG----------DRVTLSLRGPYEKMFSINDSGHISIVDLSA 206
            ++ PG+V+      D D G          +R+  +LR  ++  + +      ++  L  
Sbjct: 228 ENVEPGTVVALFAVRDQDSGVNGEITCALDERLYFALRPAFKNYYEL-----ATVSTLDR 282

Query: 207 LNTSTIQLVVVATDTGNPP 225
              +   +VV A D G+PP
Sbjct: 283 EERAQHMVVVTAADAGSPP 301



 Score = 40.0 bits (92), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 35/140 (25%), Positives = 64/140 (45%), Gaps = 17/140 (12%)

Query: 96  DISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLP 152
           +++ +  LD E    +   V A D     +T++ T ++ + +VND  P F    Y +++ 
Sbjct: 273 ELATVSTLDREERAQHMVVVTAADAGSPPLTSTHTFSVDISDVNDNAPAFNQTSYTMYVH 332

Query: 153 HIPLADLTPGSVIGKVEAADGDKGDRVTLS-----LRGPYEKMFSI----NDSGHISIVD 203
                +  P  ++G V+A D D G    +S      RGP E+  S     ++SG + ++ 
Sbjct: 333 E----NNAPALLVGAVKATDADAGPNAKVSYSVVPARGPEEEPCSCVSVNSESGGVFVLR 388

Query: 204 -LSALNTSTIQLVVVATDTG 222
            L       +++VV A D G
Sbjct: 389 PLDYEQLRQLEVVVSAADAG 408


>gi|345793787|ref|XP_849474.2| PREDICTED: protocadherin gamma-B5 [Canis lupus familiaris]
          Length = 807

 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 58/221 (26%), Positives = 103/221 (46%), Gaps = 22/221 (9%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDY---GERFSI-SRQGDISLM 100
           F+++ Y VS  EN+P    +L V+    +D  +   ++  +   G+ FS+ S+ G+I+ +
Sbjct: 242 FNQDIYRVSLPENVPPGTAVLQVSATD-QDEGINSEITYSFYRTGQVFSLNSKTGEITTL 300

Query: 101 QCLDYETEDSYRFTVYATDTL-MTTSATVNISVVNVNDWDPRFRYPQY-ELFLPHIPLAD 158
           + LD+E    Y   V   D   +    TV I++ + ND  P   +    E+ L + P   
Sbjct: 301 RTLDFEETKEYSIVVEGRDGGGLAAQCTVEINIQDENDNSPEVTFHSLAEMILENGP--- 357

Query: 159 LTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSGHIS---IVD--LSALNTSTIQ 213
             PG++I  ++  D D G+   ++ R   E  F I  S   S   ++D  L    T    
Sbjct: 358 --PGTLIALIKIHDQDSGENGEVNCRLEGEVPFQITSSSKNSYKLVIDGTLDREQTPEYN 415

Query: 214 LVVVATDTGNPPRQASVPAIMHFPEA-----IVQQASSKLN 249
           + + ATD G PP  +S+   +H  +      + QQAS +++
Sbjct: 416 VTITATDRGKPPLSSSISITLHIADVNDNAPVFQQASYEVH 456



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 62/262 (23%), Positives = 110/262 (41%), Gaps = 33/262 (12%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRDL----RVKYWL-SNDYGER-----FSISRQ 94
           F +  Y V   EN P    +  V+ + P DL    RV Y + ++D   R      S+S Q
Sbjct: 448 FQQASYEVHEAENNPPGASIAQVSASDP-DLGPNGRVSYSIVASDLEPRALASYVSVSAQ 506

Query: 95  GDISLMQ-CLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQY--- 147
             +   Q   D+E   ++  T+ A D     ++ + ++ + V + ND  PR  YP     
Sbjct: 507 SGVVFAQRAFDHEQLRAFELTLQARDQGSPALSANVSLRVLVGDRNDNAPRVLYPALGPD 566

Query: 148 -ELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-DSGHISIV 202
                  +P A   PG ++ KV A D D G    LS   L+     +FS+   +G +   
Sbjct: 567 GSALFDTVPRA-AQPGYLVTKVVAVDADSGHNAWLSYHVLQASEPGLFSLGLRTGEVRTA 625

Query: 203 D-LSALNTSTIQLVVVATDTGNPPRQASVPAIMHF--------PEAIVQQASSKLNSGTS 253
             L   + +  +L+V   D G PP  A+   ++ F        P+   +QA +   +   
Sbjct: 626 RALGDRDAARQRLLVAVRDGGQPPLSATATLLLVFADSLQEALPDVSERQAPADPQAELQ 685

Query: 254 STVLIILGVVLIVLGFVIILLI 275
             +++ L ++ ++    +IL +
Sbjct: 686 FYLVVALALISVLFLLAVILAV 707


>gi|339247983|ref|XP_003375625.1| putative cadherin domain protein [Trichinella spiralis]
 gi|316971032|gb|EFV54875.1| putative cadherin domain protein [Trichinella spiralis]
          Length = 2247

 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 55/206 (26%), Positives = 96/206 (46%), Gaps = 9/206 (4%)

Query: 30   TLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTV-TTNKPRD--LRVKYWLSNDYG 86
            T+ + K    ++   F     ++S  EN P+++V+ T+  + K  D  L   + +++ + 
Sbjct: 1454 TVNIEKLQQGVQPFHFENRSITLSVDENGPLDFVIYTMPNSCKSADYPLYAFHSINSTFE 1513

Query: 87   ERFSISRQGDISLMQCLDYETE-DSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYP 145
            + F I+ +G + + +  DYET+   Y F V  +         VN+++ ++ND  P F   
Sbjct: 1514 DIFHITEKGSLVVKKSFDYETDLRDYFFIVRGSCGDAFDYLLVNLTISDINDNMPTFSQS 1573

Query: 146  QYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKM-FSINDSGHISIVDL 204
             Y L    +P         IG + A D D G    L      + + F I+D+G + IV  
Sbjct: 1574 LYVL---EVPEGTYERRVSIGHIAATDKDSGLNAALHYSILEKNVPFEIDDTGTVYIVGT 1630

Query: 205  SALNTS-TIQLVVVATDTGNPPRQAS 229
            +    + +  L V ATD+GNPP  AS
Sbjct: 1631 ADREVNPSYNLTVQATDSGNPPLSAS 1656



 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 63/205 (30%), Positives = 89/205 (43%), Gaps = 32/205 (15%)

Query: 53   SALENLPVNYVLLTVTTNKPR--DLRVKYWL--SNDYGERFSISRQGDI--SLMQCLDYE 106
            S ++N P    LL VT   P   D  +KY +  S++Y +  +I  +G I  S +   D E
Sbjct: 853  SLIKNCPAGTFLLQVTAFDPDVLDSTLKYAVVNSSEYSDMINIDSEGKIFKSNIGNFDRE 912

Query: 107  TEDSYRFTVYATDTL-MTTSATVNISVVNVNDWDPRFRYPQYE----------LFLPHIP 155
               S +FT+   D    T +  V   +++VND  P+F    Y           LFL  + 
Sbjct: 913  LFPSIQFTIIVYDQANKTDTCVVQFVILDVNDNYPKFSRSIYFWKVVEGEIQFLFLDFVL 972

Query: 156  --LADLTPGS--------VIGKVEAADGDKGDRVTLSLRGPYEKMFSINDS--GHISIVD 203
              L  L P S         I  V+  DGD G    L L   Y K FS+     G ++IV 
Sbjct: 973  AFLKLLFPESEGIGQSFTAIDCVDPDDGDNGTVQFLLLPHEYSKHFSLEKEADGKMTIVL 1032

Query: 204  LSALN---TSTIQLVVVATDTGNPP 225
            + A +    S I +V+ A D GNPP
Sbjct: 1033 VKAFDREMKSQIPVVIQAQDGGNPP 1057



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 47/192 (24%), Positives = 91/192 (47%), Gaps = 14/192 (7%)

Query: 45  FSKNEYSVSALENLPVNYVLLTV---TTNKPRDLRVKYWLSNDYGERFSI-SRQGDISLM 100
           F  N YSV   E+ PV + ++ +    T+   + RV Y         FS+ +  G + + 
Sbjct: 468 FGSNVYSVDVREDAPVGFAVIQLKANVTDMKSNERVFYRWHGHVSNAFSLDALTGIVKIA 527

Query: 101 QCLDYETEDSYRFTVYAT-----DTLMTTSATVNISVVNVNDWDPRFR-YPQYELFLPHI 154
           + LDYE  + ++F + A      +  ++    + ++++++ND  P F   P+  + L  +
Sbjct: 528 KPLDYEERNYFQFLIEAVREGAEEARISNQVLLKVNILDINDNAPIFMILPERLVILESL 587

Query: 155 PL-ADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSGHISIVDLSALNTSTIQ 213
           PL + L   +   K  +A+G+  + +   L G   +MF I+      IV+   L++   +
Sbjct: 588 PLQSHLLNITAQDKDSSANGN--NVINYKLEGENCEMFRIHPKSGELIVN-EHLSSGLYE 644

Query: 214 LVVVATDTGNPP 225
           L ++ATD G  P
Sbjct: 645 LYIIATDGGETP 656


>gi|297676223|ref|XP_002816042.1| PREDICTED: protocadherin beta-8 [Pongo abelii]
          Length = 801

 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 57/211 (27%), Positives = 97/211 (45%), Gaps = 23/211 (10%)

Query: 95  GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFL 151
           G +  ++ LDYE   ++ F V ATD     +++ A V + V++ ND  P   YP      
Sbjct: 512 GHLFALRSLDYEALQAFEFRVGATDRGSPALSSEALVRVLVLDANDNSPFVLYPLQNGSA 571

Query: 152 PH---IPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSI-NDSGHISIVD- 203
           P    +P A   PG ++ KV A DGD G    LS   L+     +FS+   +G +     
Sbjct: 572 PCTELVPRA-AEPGYLVTKVVAVDGDSGQNAWLSYQLLKATEPGLFSVWAHNGEVRTARL 630

Query: 204 LSALNTSTIQLVVVATDTGNPPRQASVPAIMHF--------PEAIVQQASSKLNSGTSST 255
           LS  + +  +LVV+  D G PPR A+  A +H         P   + +A+       S T
Sbjct: 631 LSERDAAKHRLVVLVKDNGEPPRSAT--ATLHVLLVDGFSQPYLPLPEAAPAQGQADSLT 688

Query: 256 VLIILGVVLIVLGFVI-ILLILYIHKNKHTK 285
           V +++ +  +   F+  +LL + +   + ++
Sbjct: 689 VYLVVALASVSSLFLFSVLLFVAVRLCRRSR 719



 Score = 45.1 bits (105), Expect = 0.056,   Method: Compositional matrix adjust.
 Identities = 46/137 (33%), Positives = 63/137 (45%), Gaps = 21/137 (15%)

Query: 103 LDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADL 159
           LD E+   Y  T+  TD     +TT   + + V +VND  P F    Y LF+      + 
Sbjct: 410 LDRESRAEYNVTITVTDLGTPRLTTHLNMTVLVSDVNDNAPTFTQTSYTLFVRE----NN 465

Query: 160 TPGSVIGKVEAADGDKGD--RVTLSLRGPYE------KMFSIN-DSGH---ISIVDLSAL 207
           +P   IG V A D D G   +VT SL  P +       + SIN D+GH   +  +D  AL
Sbjct: 466 SPALHIGSVSATDRDSGTNAQVTYSLLPPQDPHLPLASLVSINADNGHLFALRSLDYEAL 525

Query: 208 NTSTIQLVVVATDTGNP 224
                +  V ATD G+P
Sbjct: 526 Q--AFEFRVGATDRGSP 540


>gi|327270435|ref|XP_003219995.1| PREDICTED: protocadherin beta-16-like [Anolis carolinensis]
          Length = 806

 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 55/162 (33%), Positives = 80/162 (49%), Gaps = 19/162 (11%)

Query: 83  NDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDW 138
           N     FSI S  G++  ++ LDYE    ++ TV ATD     +++ A V + V++ ND 
Sbjct: 495 NHAASYFSINSETGNMYALRSLDYEQIKDFKITVRATDGGIPSLSSDAFVRVMVIDENDN 554

Query: 139 DPRFRYP-QYELFLPHIPLADLTP-----GSVIGKVEAADGDKGDRVTLS---LRGPYEK 189
            P F YP Q   F    P  +L P     G +I KV A DGD G    LS   L+     
Sbjct: 555 PPFFLYPLQNSTF----PCNELLPKMAEGGYLITKVVAVDGDSGQNSWLSYEILKATDPG 610

Query: 190 MFSIN-DSGHISIVD-LSALNTSTIQLVVVATDTGNPPRQAS 229
           +FSI   +G +     L+  + S  +LV+VA D G PP+ ++
Sbjct: 611 LFSIGAQNGEVKTRRPLTERDASKQRLVIVAKDNGVPPQTST 652



 Score = 44.3 bits (103), Expect = 0.099,   Method: Compositional matrix adjust.
 Identities = 53/207 (25%), Positives = 99/207 (47%), Gaps = 27/207 (13%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVK----YWLSNDYGERFSISRQGDISLM 100
           FSK ++ +   EN+P N +   + + +  DL       Y LS++   +  +    D S+ 
Sbjct: 129 FSKQKFDLEVPENVPRN-MRFPLESAQDEDLGQNSIQNYTLSSNEHFKLGVENNTDGSIY 187

Query: 101 ------QCLDYETEDSYRFTVYATDTLM---TTSATVNISVVNVNDWDPRFRYPQYELFL 151
                 + LD E E  +  T+ A D  +   T +  +NI V+++ND  P F   +Y+   
Sbjct: 188 VDLIVEKALDREKEPFFGLTLMAVDGGIPQRTGTVQINIKVLDINDNSPHFTQSEYK--- 244

Query: 152 PHIPLADLTP-GSVIGKVEAADGDKGD--RVTLSL-RGPYE--KMFSIND-SGHISIV-D 203
             + L + +P  +++ KVEA D D G   ++T S  R P +   +F++N+ +G I ++ +
Sbjct: 245 --VRLKENSPRNTLVTKVEARDLDFGSNAQITYSFHRVPKKILNLFNLNEMTGEIIVLGE 302

Query: 204 LSALNTSTIQLVVVATDTGNPPRQASV 230
           +     ++  + + ATD G    Q  V
Sbjct: 303 IDYEKETSYDMSIKATDDGGLSGQCKV 329



 Score = 37.7 bits (86), Expect = 9.4,   Method: Compositional matrix adjust.
 Identities = 40/153 (26%), Positives = 62/153 (40%), Gaps = 34/153 (22%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGERFSISRQ--------- 94
            F+++EY V   EN P N +   VT  + RDL        D+G    I+           
Sbjct: 237 HFTQSEYKVRLKENSPRNTL---VTKVEARDL--------DFGSNAQITYSFHRVPKKIL 285

Query: 95  ---------GDISLMQCLDYETEDSYRFTVYATDT-LMTTSATVNISVVNVNDWDPRFRY 144
                    G+I ++  +DYE E SY  ++ ATD   ++    V++ V +VND  P    
Sbjct: 286 NLFNLNEMTGEIIVLGEIDYEKETSYDMSIKATDDGGLSGQCKVSVEVEDVNDNAPEVSI 345

Query: 145 PQYELFLPHIPLADLTPGSVIGKVEAADGDKGD 177
              +  +P     D    +V+      D D GD
Sbjct: 346 ISLKNIIPE----DSPLEAVVALFSVRDKDSGD 374


>gi|308470294|ref|XP_003097381.1| CRE-CDH-5 protein [Caenorhabditis remanei]
 gi|308240230|gb|EFO84182.1| CRE-CDH-5 protein [Caenorhabditis remanei]
          Length = 1547

 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 54/178 (30%), Positives = 82/178 (46%), Gaps = 11/178 (6%)

Query: 56  ENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTV 115
           EN P N V++++     +DL     +  +   +F+I   G I     LD E    Y   V
Sbjct: 370 ENTPANTVVVSLGDESSKDLTYFNIVGGNEEGKFAIDDAGTIVTADELDREKTAMYSLQV 429

Query: 116 YATDT-----LMTTSATVNISVVNVNDWDPRFRYPQ-YELFLPHIPLADLTPGSVIGK-- 167
                     L  T   V ++V++VND  P F  PQ   L L    +  LT   +IGK  
Sbjct: 430 ETRSRNPDQHLYWT--LVQVTVMDVNDNSPIFTDPQPIRLRLSIDDIEQLTANMIIGKIG 487

Query: 168 VEAADGDKGDRVTLSLRGPYEKMFSINDSGHISI-VDLSALNTSTIQLVVVATDTGNP 224
           VE AD D   R+ L +  P+ K+F+I++ G +S+  D +A +     + +VA D G P
Sbjct: 488 VEDADADDNGRLELRIMPPHNKLFAISNEGILSVNGDFTAAHFGEHDVTIVARDHGEP 545



 Score = 55.8 bits (133), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 46/164 (28%), Positives = 73/164 (44%), Gaps = 19/164 (11%)

Query: 77  VKYWLSNDYGERFSISR-QGDISLMQCLDYETEDSYRFTVYAT-------DTLMTTSATV 128
           + Y L       FS+S   G I+L++ LD E   +    V  +       D  +    ++
Sbjct: 827 ITYVLHKGDPSLFSVSSYSGSINLLRALDAEANSTVTIQVSTSEAQTMEVDPKLAHFVSI 886

Query: 129 NISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGD-----RVTLSL 183
            I++ + NDW P F    YE  +      D  PG+++G+V A D D+ D     R  L  
Sbjct: 887 TINIADKNDWIPNFESGSYEFDVKE----DTLPGTIVGQVNAFDQDRDDPNNRIRYRLLS 942

Query: 184 RGPYEKMFSIN-DSGHISIVD-LSALNTSTIQLVVVATDTGNPP 225
            G  E  F++N +SG I++   + A     I L +   D+G PP
Sbjct: 943 AGGLEAHFNVNAESGLITLARPIDAFAGEKITLRIEGADSGMPP 986



 Score = 47.0 bits (110), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 38/110 (34%), Positives = 53/110 (48%), Gaps = 7/110 (6%)

Query: 42   ELQFSKNEYSVSALENL-PVNYVLLTVTTNKPRDLR--VKYWLSNDYGERFSISRQGD-- 96
            ELQFS   Y+ S  E + P + V +    NKP D R  +   +S +Y   F ++   D  
Sbjct: 1019 ELQFSLRNYTASVSEAVRPPHLVQVLSVMNKPTDTRFIICNIVSGNYRGAFGVTAGNDGN 1078

Query: 97   --ISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRY 144
              +     LD ET + Y   V  T    T  A V+I+V++VND  PRF Y
Sbjct: 1079 CELRTQMELDRETVERYLLNVTVTAGTQTDYALVSITVLDVNDNVPRFVY 1128


>gi|332834583|ref|XP_001154192.2| PREDICTED: cadherin-related family member 1 isoform 1 [Pan
           troglodytes]
          Length = 859

 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 64/211 (30%), Positives = 96/211 (45%), Gaps = 29/211 (13%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTTNKPRDL----RVKYWLSNDYGERFSISRQGDISL 99
           +F +  Y     E++P   ++  V     RD      V Y+L N +   F++ R   +  
Sbjct: 134 RFIQEPYVALVPEDIPAGSIIFKVHAVD-RDTGSGGSVTYFLQNLHSP-FAVDRHSGVLR 191

Query: 100 MQC---LDYETEDSYRFTVYA---------TDTLMTTSATVNISVVNVNDWDPRFRYPQY 147
           +Q    LDYE   ++  TV A          D + + + TV ++V +V D  P F    Y
Sbjct: 192 LQAGATLDYERSRTHYITVVAKDGGGRLHGADVVFSATTTVTVNVEDVQDMAPVFVGTPY 251

Query: 148 ELFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIND-SGHISIVDL 204
             ++      D  PGS + KV A DGD+G  +R+  SL    +  F IN+ SG ISI   
Sbjct: 252 YGYV----YEDTLPGSEVLKVVAMDGDRGKPNRILYSLVNGSDGAFEINETSGAISITQS 307

Query: 205 SA-LNTSTIQLVVVATD---TGNPPRQASVP 231
            A L     +L V  T+   TG+P  QA+VP
Sbjct: 308 PAQLQREVYELHVQVTEMSPTGSPAAQATVP 338



 Score = 40.4 bits (93), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 53/175 (30%), Positives = 78/175 (44%), Gaps = 12/175 (6%)

Query: 56  ENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGER--FSISRQ-GDISLMQCLDYETEDSYR 112
           E+ PV   + T+    P    + Y +S D   R  FS+    G+I+L++ LD E ED   
Sbjct: 46  EDTPVGSHVYTLNGTDPEGDPISYHISFDPSARSVFSVDPTFGNITLVEELDREREDEIE 105

Query: 113 FTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAAD 172
             +  +D L   +  V I V + ND  PRF    Y   +P     D+  GS+I KV A D
Sbjct: 106 AIISISDGLNLVAEKVVILVTDANDEAPRFIQEPYVALVPE----DIPAGSIIFKVHAVD 161

Query: 173 GD--KGDRVTLSLRGPYEKMFSINDSGHISIVDLSALN---TSTIQLVVVATDTG 222
            D   G  VT  L+  +        SG + +   + L+   + T  + VVA D G
Sbjct: 162 RDTGSGGSVTYFLQNLHSPFAVDRHSGVLRLQAGATLDYERSRTHYITVVAKDGG 216


>gi|291409467|ref|XP_002721024.1| PREDICTED: protocadherin 21 [Oryctolagus cuniculus]
          Length = 857

 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 63/210 (30%), Positives = 93/210 (44%), Gaps = 26/210 (12%)

Query: 44  QFSKNEYSVSALENLPVN---YVLLTVTTNKPRDLRVKYWLSNDYGERFSISRQGDISLM 100
           QF +  Y V   E+ P     + +  V  +      V Y+L N +  +F++ R   +  +
Sbjct: 129 QFIQEPYVVLVPEDTPAGSSIFKVRAVDKDTGSGGSVTYFLQNLHPSKFAVDRHSGVLRL 188

Query: 101 QC---LDYETEDSYRFTVYA---------TDTLMTTSATVNISVVNVNDWDPRFRYPQYE 148
           Q    LDYE   ++  TV A          D + + +ATV ++V +V D  P F    Y 
Sbjct: 189 QAGATLDYEKSRTHFITVVAKDGGGRLRGADVVFSATATVTVNVEDVQDTAPVFVGTPYY 248

Query: 149 LFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIND-SGHISIVDLS 205
            ++      D  PGS +  V A DGD+G  +RV  SL    E  F IN+ SG I +    
Sbjct: 249 GYV----YEDTLPGSEVLTVVAMDGDRGNPNRVLYSLVNGSEGAFEINETSGAIFLTQSP 304

Query: 206 A-LNTSTIQLVVVATD---TGNPPRQASVP 231
           A L     +L V  T+    G+P  QA VP
Sbjct: 305 AQLQREMYELHVQVTEISSAGSPAAQAMVP 334


>gi|297482956|ref|XP_002693195.1| PREDICTED: protocadherin-16 [Bos taurus]
 gi|296480033|tpg|DAA22148.1| TPA: dachsous 1 [Bos taurus]
          Length = 3296

 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 62/192 (32%), Positives = 95/192 (49%), Gaps = 23/192 (11%)

Query: 56  ENLPVNYVLLTVTTNKPRDLRVKYW-LSNDYGE-RFSISRQGDISLMQC----LDYETED 109
           E  P   ++  ++ + P D    +  +S + GE  F++S Q  +  + C    LD E  D
Sbjct: 375 EAAPPGQLVARISVSDPDDGDFAHVNVSLEGGEGHFALSTQDSVIYLVCVARRLDREERD 434

Query: 110 SYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLT-PGSVI 165
           +Y   V ATD+    +   A   + V +VND  P F     +L+ P  PL ++  PGS +
Sbjct: 435 AYNLRVTATDSGSPPLRAEAAFVLHVTDVNDNAPAF---DRQLYRPE-PLPEVALPGSFV 490

Query: 166 GKVEAADGDKG--DRVTLSLR-GPYEKMFSINDSGHISIVDLSALNTSTI----QLVVVA 218
            +V A D D+G   +VT SL  G + + FSI+ +    IV  +AL    +    QL+VVA
Sbjct: 491 ARVTARDPDQGTNGQVTYSLAPGAHTRWFSIDPTS--GIVTTAALLDYELEPQPQLIVVA 548

Query: 219 TDTGNPPRQASV 230
           TD G PP  +S 
Sbjct: 549 TDGGLPPLSSSA 560



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 63/211 (29%), Positives = 91/211 (43%), Gaps = 20/211 (9%)

Query: 31   LIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDY-GERF 89
            ++V   GT      F    Y V           +L V    P    V Y L+ D  G  F
Sbjct: 984  VVVQDLGTRGLAPHFDSPTYRVDLPSGTTPGTQVLQVQARAPDGSPVTYHLAADGPGSPF 1043

Query: 90   SISRQ-GDISLMQCLDYETEDSYRFTVYATDT------LMTTSATVNISVVNVNDWDPRF 142
             +  Q G + +   LD+E ++ Y   V A           T +ATV IS++N ND  PR 
Sbjct: 1044 GLEPQSGWLWVRAALDHEAQELYTLKVMAVSGSKAELGQQTATATVRISILNQNDHSPRL 1103

Query: 143  -RYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYE--KMFSIN-DS 196
               P +     + P     PG+ +G+V A D D G   R+T SLR   E  K F I+  +
Sbjct: 1104 SEEPTFLAVAENQP-----PGTSVGRVFATDRDSGINGRLTYSLRQLSEDSKAFRIHPQT 1158

Query: 197  GHISIVD-LSALNTSTIQLVVVATDTGNPPR 226
            G ++ +  L     ++ QL+V   D G+PPR
Sbjct: 1159 GEVTTLQTLDRERQNSYQLLVQVQDAGSPPR 1189



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 64/199 (32%), Positives = 94/199 (47%), Gaps = 28/199 (14%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNK----PRDLRVKYWLSNDYGERFSI----SRQGD 96
            F++  Y V+  E+ PV   LL V  +     P  L V++ LS+  G+   +       GD
Sbjct: 2600 FTRAAYRVAVPEDTPVGAELLHVEASDADPGPHGL-VRFTLSS--GDPLGLFELDESSGD 2656

Query: 97   ISLMQCLDYETEDSYRFTVYATDTLMT--TSATVNISVVNVNDWDPRFRYPQYELFLPHI 154
            + L + LD ET+  ++  V A D        A V I V +VND  P F      L L   
Sbjct: 2657 LRLARPLDCETQARHQLVVQAADPAGAHFALAPVTIEVQDVNDHGPAF-----PLSLLST 2711

Query: 155  PLAD-LTPGSVIGKVEAADGDKG--DRVTLSL--RGPY---EKMFSINDS-GHI-SIVDL 204
             LA+   PG+++  + A DGD G   R+  SL   GP     + F++N S G + + V  
Sbjct: 2712 SLAENQPPGTLVTTLHAIDGDAGAFGRLHYSLLEAGPGPEGREAFALNSSTGELRARVAF 2771

Query: 205  SALNTSTIQLVVVATDTGN 223
               +T + QL+V ATD GN
Sbjct: 2772 DYEHTGSFQLLVGATDAGN 2790



 Score = 55.1 bits (131), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 58/198 (29%), Positives = 83/198 (41%), Gaps = 14/198 (7%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKP---RDLRVKYWLSNDYGERFSIS-RQGDISLM 100
            F    YSV   E+ P   +LL +  + P    + RV Y+L       F +    G++   
Sbjct: 1853 FPVPSYSVEVPEDAPAGTLLLQLQAHDPDAGANGRVTYYLGTGAAGAFLLEPSSGELRTA 1912

Query: 101  QCLDYETEDSYRFTVYATDTL----MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
              LD E   SY FTV A D+     ++T+  V I+V +VND  P F      L LP    
Sbjct: 1913 TTLDREQCPSYAFTVNAVDSAAAGPLSTTVPVTITVRDVNDHAPTFPTSPLRLRLPRPGP 1972

Query: 157  ADLTPGSVIGKVEAADGDKGDRVTLSLR-----GPYEKMFSINDSGHISIVDLSALNTST 211
               TP   +  + A D D G   ++  R      P   + S      +S   +S L+   
Sbjct: 1973 VFSTPVLPLATLRAEDRDAGANASILYRLAGTPPPGTTVDSYTGEIRVSRSPVS-LSPRD 2031

Query: 212  IQLVVVATDTGNPPRQAS 229
              L +VATD G P R A+
Sbjct: 2032 RVLFIVATDLGRPARSAT 2049



 Score = 55.1 bits (131), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 72/261 (27%), Positives = 113/261 (43%), Gaps = 46/261 (17%)

Query: 11   ITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLT---- 66
            + +V+ A  +    R A AT+ V     +     F+   Y V+  E+LP    LLT    
Sbjct: 2446 VDVVLEARDHGVPVRAARATVHVQLQDQNDHAPSFTLPHYRVAVTEDLPPGSTLLTLEAT 2505

Query: 67   ---------------VTTNKPRDLRVKYWLSNDYGERFSISRQ--GDISLMQCLDYETED 109
                           V+ N+ R  +++  L+ + GE   +  +  G + L++ LD+E+  
Sbjct: 2506 DADGSRSHAAVDYSIVSGNRGRVFQLEPRLA-EAGESDGLGPRALGCLVLLEPLDFESLT 2564

Query: 110  SYRFTVYATDTLM---TTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIG 166
             Y  TV ATD      +++  V +SV++VND  P F    Y + +P     D   G+ + 
Sbjct: 2565 QYNLTVAATDRGQPPRSSAVPVTVSVLDVNDNPPVFTRAAYRVAVPE----DTPVGAELL 2620

Query: 167  KVEAADGDKGD----RVTLSLRGPYEKMFSIND-SGHISIV-DLSALNTSTIQLVVVATD 220
             VEA+D D G     R TLS   P   +F +++ SG + +   L     +  QLVV A D
Sbjct: 2621 HVEASDADPGPHGLVRFTLSSGDPL-GLFELDESSGDLRLARPLDCETQARHQLVVQAAD 2679

Query: 221  TGNPPRQASVPAIMHFPEAIV 241
                      PA  HF  A V
Sbjct: 2680 ----------PAGAHFALAPV 2690



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 69/252 (27%), Positives = 117/252 (46%), Gaps = 37/252 (14%)

Query: 14   VVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALEN------LPVNYVLLTV 67
            V  A+ ++ Q+ Y L  + VS +   L + Q +     +S L        L      L V
Sbjct: 1054 VRAALDHEAQELYTLKVMAVSGSKAELGQ-QTATATVRISILNQNDHSPRLSEEPTFLAV 1112

Query: 68   TTNKP------------RDL----RVKYWLS--NDYGERFSISRQ-GDISLMQCLDYETE 108
              N+P            RD     R+ Y L   ++  + F I  Q G+++ +Q LD E +
Sbjct: 1113 AENQPPGTSVGRVFATDRDSGINGRLTYSLRQLSEDSKAFRIHPQTGEVTTLQTLDRERQ 1172

Query: 109  DSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYEL--FLPHIPLAD-LTPG 162
            +SY+  V   D      +T+ TV+I+V+++ND  P F          LP I + D + PG
Sbjct: 1173 NSYQLLVQVQDAGSPPRSTTGTVHIAVLDLNDNSPTFLQASGAAGGGLP-IQVPDGVPPG 1231

Query: 163  SVIGKVEAADGDKGDRVTL--SLRGPYEKMFSIN-DSGH-ISIVDLSALNTSTIQLVVVA 218
            +++  ++A D D+G+  T+   L GP  ++FS++  SG  ++   L         L + A
Sbjct: 1232 TLVTTLQAKDPDEGENGTILYMLTGPGSELFSLHPHSGELLTAAPLIRAERPHYVLTLSA 1291

Query: 219  TDTGNPPRQASV 230
             D G+PPR +S+
Sbjct: 1292 HDQGSPPRSSSL 1303



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 46/146 (31%), Positives = 65/146 (44%), Gaps = 7/146 (4%)

Query: 13   LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKP 72
            L V A  + +  R A   L VS A  +     F + EYSV   EN P    LLT+    P
Sbjct: 1615 LTVVASDHGSPPRSATQLLTVSVADVNDEAPAFQQQEYSVLLRENSPPGTSLLTLQATDP 1674

Query: 73   RDLRVKYWLSND--YGERFSISRQ-GDISLMQCLDYETEDSYRFTVYATD---TLMTTSA 126
             DL     ++     GE FS+    G ++ ++ LD E ++    TVYA D     + T  
Sbjct: 1675 -DLGANGQVTYGGISGENFSLDPDTGVLTTLRALDREEQEEINLTVYARDGGSPPLLTHV 1733

Query: 127  TVNISVVNVNDWDPRFRYPQYELFLP 152
            TV ++V + ND  P F      L +P
Sbjct: 1734 TVRVAVEDENDHAPTFGSAHLSLEVP 1759



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 48/149 (32%), Positives = 64/149 (42%), Gaps = 15/149 (10%)

Query: 89   FSISRQGD-ISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQY 147
            FS+ R G  +SL   LD+E  D Y   + A D      A + + V +VND  P F    Y
Sbjct: 2320 FSVGRYGGRLSLTGPLDFEQRDRYHLQLLAHDGPHEGRANLTVFVEDVNDNSPAFSQTLY 2379

Query: 148  E-LFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDSGH-----I 199
            + + L H P     PGS I  V A D D G    V+  L    E  FSI+ +       +
Sbjct: 2380 QVMLLEHTP-----PGSAILSVSATDRDSGANGHVSYHLASSAEG-FSIDPNNGTLFTTV 2433

Query: 200  SIVDLSALNTSTIQLVVVATDTGNPPRQA 228
              V L       + +V+ A D G P R A
Sbjct: 2434 GTVALGHEGPGMVDVVLEARDHGVPVRAA 2462



 Score = 45.8 bits (107), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 58/219 (26%), Positives = 87/219 (39%), Gaps = 39/219 (17%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDL----RVKYWLSNDYGERFSISRQGDISLM 100
            FS+  Y V  LE+ P    +L+V+    RD      V Y L++   E FSI         
Sbjct: 2374 FSQTLYQVMLLEHTPPGSAILSVSATD-RDSGANGHVSYHLASS-AEGFSIDPNNGTLFT 2431

Query: 101  Q----CLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
                  L +E        + A D    +    ATV++ + + ND  P F  P Y + +  
Sbjct: 2432 TVGTVALGHEGPGMVDVVLEARDHGVPVRAARATVHVQLQDQNDHAPSFTLPHYRVAV-- 2489

Query: 154  IPLADLTPGSVIGKVEAADGDKGDRVTLS-----LRGPYEKMFSIN----DSGHISIVDL 204
                DL PGS +  +EA D D G R   +     + G   ++F +     ++G    +  
Sbjct: 2490 --TEDLPPGSTLLTLEATDAD-GSRSHAAVDYSIVSGNRGRVFQLEPRLAEAGESDGLGP 2546

Query: 205  SALNT------------STIQLVVVATDTGNPPRQASVP 231
             AL              +   L V ATD G PPR ++VP
Sbjct: 2547 RALGCLVLLEPLDFESLTQYNLTVAATDRGQPPRSSAVP 2585



 Score = 43.9 bits (102), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 57/198 (28%), Positives = 86/198 (43%), Gaps = 21/198 (10%)

Query: 42  ELQFSKNEYSVSALENLPVNYVLLTVTT----NKPRDLRVKYWLSNDYGER----FSI-S 92
           E QF +  Y+ S  E        L VT     + P  L + Y L    G      F I +
Sbjct: 573 EPQFQRTFYNASLPEGTQPGTCFLQVTATDADSGPFGL-LSYSLGAGLGTSGSPPFRIDA 631

Query: 93  RQGDISLMQCLDY-ETEDSYRFTVYATDTLMTTSAT-VNISVVNVNDWDPRFRYPQYELF 150
             GD+   + LD  +   S+ FTV A D     S   V + V + ND  P+F   +Y   
Sbjct: 632 HSGDVCTTRTLDRDQGPSSFDFTVTAVDGGGLKSMVYVKVFVSDENDNPPQFYPREYAAS 691

Query: 151 LPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIND-SGHISIV-DLS 205
           L     A   PG+ + +V A D D+G    LS   L G    +F++++ SG +++   L+
Sbjct: 692 L----SAQSAPGTAVLRVRAHDPDQGPHGRLSYHILAGNSPPLFALDEHSGLLTVAWPLA 747

Query: 206 ALNTSTIQLVVVATDTGN 223
              +S +QL + A D G 
Sbjct: 748 RRASSMVQLEIGARDGGG 765



 Score = 43.9 bits (102), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 36/106 (33%), Positives = 53/106 (50%), Gaps = 9/106 (8%)

Query: 76  RVKYWLSNDYGER-FSIS-RQGDISLMQCLDYETEDSYRFTVYATD---TLMTTSATVNI 130
           +V Y L+     R FSI    G ++    LDYE E   +  V ATD     +++SATV++
Sbjct: 505 QVTYSLAPGAHTRWFSIDPTSGIVTTAALLDYELEPQPQLIVVATDGGLPPLSSSATVSV 564

Query: 131 SVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG 176
            + +VND +P+F+   Y   LP        PG+   +V A D D G
Sbjct: 565 VLQDVNDNEPQFQRTFYNASLPE----GTQPGTCFLQVTATDADSG 606



 Score = 41.2 bits (95), Expect = 0.75,   Method: Compositional matrix adjust.
 Identities = 27/94 (28%), Positives = 48/94 (51%), Gaps = 9/94 (9%)

Query: 95   GDISLMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFL 151
            G+   M+ LD E E +++  + A D     ++ +  V ++V++ ND  P F  P Y + +
Sbjct: 1803 GEFGTMRPLDREVEPAFQLQIEARDGGQPALSATLLVTVTVLDANDHAPAFPVPSYSVEV 1862

Query: 152  PHIPLADLTPGSVIGKVEAADGDKG--DRVTLSL 183
            P     D   G+++ +++A D D G   RVT  L
Sbjct: 1863 PE----DAPAGTLLLQLQAHDPDAGANGRVTYYL 1892



 Score = 39.7 bits (91), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 32/105 (30%), Positives = 51/105 (48%), Gaps = 8/105 (7%)

Query: 126 ATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSL 183
           A V + + +VND  P F  P+  + LP    +   PG++I  + A D D G   RVT +L
Sbjct: 876 ARVRVLLDDVNDNSPAFPAPEDTVLLP----SSTAPGTLIYTLRALDPDSGVNSRVTFTL 931

Query: 184 RGPYEKMFSIND-SGHISIVDLSALNTSTI-QLVVVATDTGNPPR 226
                  F+++  +GHI ++           +L + A D G+PPR
Sbjct: 932 LAGGGGTFTVDPTTGHIRLMGPLGPPGGPAHELELEARDGGSPPR 976



 Score = 38.9 bits (89), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 45/163 (27%), Positives = 70/163 (42%), Gaps = 22/163 (13%)

Query: 89  FSI-SRQGDISLMQCLDYETEDSYRFTVYATDTLMTT---SATVNISVVNVNDWDPRFRY 144
           FSI +  G + L + LD+E    +   V A D        SA V + V + ND  P    
Sbjct: 303 FSIDAHTGLLRLERPLDFEQRRVHELVVQARDGGAHPELGSAFVTVHVRDANDNQPSMTV 362

Query: 145 PQYELFL-----PHIPLADLTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSINDSG 197
               +FL     P +  A   PG ++ ++  +D D GD   V +SL G  E  F+++   
Sbjct: 363 ----IFLSADGSPRVSEA-APPGQLVARISVSDPDDGDFAHVNVSLEG-GEGHFALSTQD 416

Query: 198 HISIV-----DLSALNTSTIQLVVVATDTGNPPRQASVPAIMH 235
            +  +      L         L V ATD+G+PP +A    ++H
Sbjct: 417 SVIYLVCVARRLDREERDAYNLRVTATDSGSPPLRAEAAFVLH 459


>gi|190336742|gb|AAI62537.1| Pcdh2g12 protein [Danio rerio]
          Length = 946

 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 64/230 (27%), Positives = 110/230 (47%), Gaps = 21/230 (9%)

Query: 11  ITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTN 70
           +TL++ A+      R     + V+    +     FS+  Y VS  EN PV+ V++TV+ N
Sbjct: 208 VTLILTAVDGGTPPRSGTVAIHVTVLDANDNAPVFSQAVYKVSLPENSPVDTVVVTVSAN 267

Query: 71  ---KPRDLRVKY---WLSNDYGERFSISRQ-GDISLMQCLDYETEDSYRFTVYATDTL-M 122
              + ++  V Y    +S +    FS+ +  G I+L+  LDYE E S+   + ATD L +
Sbjct: 268 DADEGQNGEVTYEFGHISENDITIFSLDQNSGKITLIGSLDYEDEASFELPIQATDGLGL 327

Query: 123 TTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGD----R 178
            + +TV I V ++ND  P        + +P   L    PG+ +G +   D D  +    R
Sbjct: 328 VSYSTVVIDVSDINDNSPIIIVKSLNIPIPESAL----PGTEVGIINVQDRDSENNGQVR 383

Query: 179 VTLSLRGPYEKMFSINDSGHISIVDLSALNT---STIQLVVVATDTGNPP 225
            ++    P++ + SI +  + S+V    L+    S   + + ATD G+PP
Sbjct: 384 CSIQQNVPFKLVPSIKN--YYSLVTTGELDRELLSEYNITITATDEGSPP 431



 Score = 46.6 bits (109), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 50/211 (23%), Positives = 93/211 (44%), Gaps = 23/211 (10%)

Query: 95  GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYP--QYEL 149
           G I  ++  DYE   S++  V A D     ++++ TV++ + + ND  P+  YP  +   
Sbjct: 512 GVIHAVRSFDYEQMKSFKVLVLARDNGSPPLSSNVTVSVFISDENDNSPQILYPFPEGNS 571

Query: 150 FLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-DSGHISIV-DL 204
           F+  +        S++ KV A D D G    LS   ++     +F+I   SG I    D+
Sbjct: 572 FMTEMVPKAAQARSLVSKVIAVDADSGQNAWLSYHIIKATDPGLFTIGVHSGEIRTQRDI 631

Query: 205 SALNTSTIQLVVVATDTGNPPRQASVPAIMHFPEAIVQ----------QASSKLNSGTSS 254
           S  ++    L+V   D G P   A+    +   + + +          ++SSKL   T  
Sbjct: 632 SESDSMKQNLIVSVRDNGQPSLSATCALYLLVSDNLAEVPELKDMSHDESSSKL---TFY 688

Query: 255 TVLIILGVVLIVLGFVIILLILYIHKNKHTK 285
            ++ ++ V    L F+II+L +   + +  +
Sbjct: 689 LIIALVSVSTFFLTFIIIILAVRFCRRRKPR 719


>gi|14589944|ref|NP_116754.1| protocadherin-11 Y-linked isoform b [Homo sapiens]
 gi|13161057|gb|AAK13468.1|AF332216_1 protocadherin 11 [Homo sapiens]
          Length = 1048

 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 76/274 (27%), Positives = 119/274 (43%), Gaps = 40/274 (14%)

Query: 45  FSKNEYSVSALENLPVNYV--LLTVTTNKPRDLRVKYWLSNDYGERFSISRQ-GDISLMQ 101
           F+ NEY     ENLP +    L+TVT     D         D  + F+I  Q G I    
Sbjct: 602 FTHNEYKFYVPENLPRHGTVGLITVTDPDYGDNSAVTLSILDENDDFTIDSQTGVIRPNI 661

Query: 102 CLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYP----QYELFLPHI 154
             D E ++SY F V A D      ++SA V I+VV+VND  P F  P     YEL LP  
Sbjct: 662 SFDREKQESYTFYVKAEDGGRVSRSSSAKVTINVVDVNDNKPVFIVPPYNYSYELVLPST 721

Query: 155 PLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-DSGHISIVDLSALNTS 210
                 PG+V+ +V A D D G    +    + G    +F+I+ ++G+I++++   +   
Sbjct: 722 -----NPGTVVFQVIAVDNDTGMNAEVRYSIVGGNTRDLFAIDQETGNITLMEKCDVTDL 776

Query: 211 TIQLVVV-ATDTGNPPRQASVPAIMHFPEAIVQQAS--------------------SKLN 249
            +  V+V A D G P    SV  +  F    V  A+                    + ++
Sbjct: 777 GLHRVLVKANDLGQPDSLFSVVIVNLFVNESVTNATLINELVRKSIEAPVTPNTEIADVS 836

Query: 250 SGTSSTVLIILGVVLIVLGFVIILLILYIHKNKH 283
           S TS  V I++  V   +  V+++ I  + + + 
Sbjct: 837 SPTSDYVKILVAAVAGTITVVVVIFITAVVRCRQ 870



 Score = 58.2 bits (139), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 37/114 (32%), Positives = 62/114 (54%), Gaps = 10/114 (8%)

Query: 76  RVKYWLSNDYGERFSISRQ-GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNIS 131
            + Y L  D    FS+ R+ G +++++ LD E ED Y FT+ A D     +T++ TV +S
Sbjct: 532 EINYLLGPDAPPEFSLDRRTGMLTVVKKLDREKEDKYLFTILAKDNGVPPLTSNVTVFVS 591

Query: 132 VVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDR--VTLSL 183
           +++ ND  P F + +Y+ ++P     +L     +G +   D D GD   VTLS+
Sbjct: 592 IIDQNDNSPVFTHNEYKFYVPE----NLPRHGTVGLITVTDPDYGDNSAVTLSI 641



 Score = 38.1 bits (87), Expect = 7.9,   Method: Compositional matrix adjust.
 Identities = 36/139 (25%), Positives = 67/139 (48%), Gaps = 15/139 (10%)

Query: 103 LDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADL 159
           LD E +D+Y   V   D      +++A + +SV + ND  P F+  + E+ +P     + 
Sbjct: 239 LDREEKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVFKETEIEVSIPE----NA 294

Query: 160 TPGSVIGKVEAADGDKGDRVTLS------LRGPYEKMFSIN-DSGHISIVD-LSALNTST 211
             G+ + ++ A D D G+   +       +     ++F +N  +G I+I + L    T  
Sbjct: 295 PVGTSVTQLHATDADIGENAKIHFSFSNLVSNIARRLFHLNATTGLITIKEPLDREETPN 354

Query: 212 IQLVVVATDTGNPPRQASV 230
            +L+V+A+D G  P +A V
Sbjct: 355 HKLLVLASDGGLMPARAMV 373


>gi|14589942|ref|NP_116753.1| protocadherin-11 Y-linked isoform a [Homo sapiens]
 gi|10803411|emb|CAC13122.1| protocadherin [Homo sapiens]
          Length = 1037

 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 76/274 (27%), Positives = 119/274 (43%), Gaps = 40/274 (14%)

Query: 45  FSKNEYSVSALENLPVNYV--LLTVTTNKPRDLRVKYWLSNDYGERFSISRQ-GDISLMQ 101
           F+ NEY     ENLP +    L+TVT     D         D  + F+I  Q G I    
Sbjct: 591 FTHNEYKFYVPENLPRHGTVGLITVTDPDYGDNSAVTLSILDENDDFTIDSQTGVIRPNI 650

Query: 102 CLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYP----QYELFLPHI 154
             D E ++SY F V A D      ++SA V I+VV+VND  P F  P     YEL LP  
Sbjct: 651 SFDREKQESYTFYVKAEDGGRVSRSSSAKVTINVVDVNDNKPVFIVPPYNYSYELVLPST 710

Query: 155 PLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-DSGHISIVDLSALNTS 210
                 PG+V+ +V A D D G    +    + G    +F+I+ ++G+I++++   +   
Sbjct: 711 -----NPGTVVFQVIAVDNDTGMNAEVRYSIVGGNTRDLFAIDQETGNITLMEKCDVTDL 765

Query: 211 TIQLVVV-ATDTGNPPRQASVPAIMHFPEAIVQQAS--------------------SKLN 249
            +  V+V A D G P    SV  +  F    V  A+                    + ++
Sbjct: 766 GLHRVLVKANDLGQPDSLFSVVIVNLFVNESVTNATLINELVRKSIEAPVTPNTEIADVS 825

Query: 250 SGTSSTVLIILGVVLIVLGFVIILLILYIHKNKH 283
           S TS  V I++  V   +  V+++ I  + + + 
Sbjct: 826 SPTSDYVKILVAAVAGTITVVVVIFITAVVRCRQ 859



 Score = 58.2 bits (139), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 37/114 (32%), Positives = 62/114 (54%), Gaps = 10/114 (8%)

Query: 76  RVKYWLSNDYGERFSISRQ-GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNIS 131
            + Y L  D    FS+ R+ G +++++ LD E ED Y FT+ A D     +T++ TV +S
Sbjct: 521 EINYLLGPDAPPEFSLDRRTGMLTVVKKLDREKEDKYLFTILAKDNGVPPLTSNVTVFVS 580

Query: 132 VVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDR--VTLSL 183
           +++ ND  P F + +Y+ ++P     +L     +G +   D D GD   VTLS+
Sbjct: 581 IIDQNDNSPVFTHNEYKFYVPE----NLPRHGTVGLITVTDPDYGDNSAVTLSI 630



 Score = 38.1 bits (87), Expect = 7.6,   Method: Compositional matrix adjust.
 Identities = 36/139 (25%), Positives = 67/139 (48%), Gaps = 15/139 (10%)

Query: 103 LDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADL 159
           LD E +D+Y   V   D      +++A + +SV + ND  P F+  + E+ +P     + 
Sbjct: 228 LDREEKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVFKETEIEVSIPE----NA 283

Query: 160 TPGSVIGKVEAADGDKGDRVTLS------LRGPYEKMFSIN-DSGHISIVD-LSALNTST 211
             G+ + ++ A D D G+   +       +     ++F +N  +G I+I + L    T  
Sbjct: 284 PVGTSVTQLHATDADIGENAKIHFSFSNLVSNIARRLFHLNATTGLITIKEPLDREETPN 343

Query: 212 IQLVVVATDTGNPPRQASV 230
            +L+V+A+D G  P +A V
Sbjct: 344 HKLLVLASDGGLMPARAMV 362


>gi|426396600|ref|XP_004064524.1| PREDICTED: protocadherin-11 X-linked-like isoform 3 [Gorilla
           gorilla gorilla]
          Length = 1050

 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 68/216 (31%), Positives = 100/216 (46%), Gaps = 20/216 (9%)

Query: 45  FSKNEYSVSALENLPVNYV--LLTVTTNKPRDLRVKYWLSNDYGERFSISRQ-GDISLMQ 101
           F+ NEY+    ENLP +    L+TVT     D         D  + F+I  Q G I    
Sbjct: 599 FTHNEYNFYVPENLPRHGTVGLITVTDPDYGDNSAVTLSILDENDDFTIDSQTGVIRPNI 658

Query: 102 CLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYP----QYELFLPHI 154
             D E ++SY F V A D      ++SA V I+VV+VND  P F  P     YEL LP  
Sbjct: 659 SFDREKQESYTFYVKAEDGGRVSRSSSAKVTINVVDVNDNKPVFIVPPSNYSYELVLPST 718

Query: 155 PLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-DSGHISIVDLSALNTS 210
                 PG+V+ +V A D D G    +    + G    +F+I+ ++G+I++++   +   
Sbjct: 719 -----NPGTVVFQVIAVDNDTGMNAEVRYSIVGGNTRDLFAIDQETGNITLMEKCDVTDL 773

Query: 211 TIQLVVV-ATDTGNPPRQASVPAIMHFPEAIVQQAS 245
            +  V+V A D G P    SV  +  F    V  A+
Sbjct: 774 GLHRVLVKANDLGQPDSLFSVVIVNLFVNESVTNAT 809



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/114 (32%), Positives = 61/114 (53%), Gaps = 10/114 (8%)

Query: 76  RVKYWLSNDYGERFSISRQ-GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNIS 131
            + Y L  D    FS+ R+ G +++++ LD E ED Y FT+ A D     +T++ TV +S
Sbjct: 529 EINYLLGPDAPPEFSLDRRTGMLTVVKKLDREKEDKYLFTILAKDNGVPPLTSNVTVFVS 588

Query: 132 VVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDR--VTLSL 183
           +++ ND  P F + +Y  ++P     +L     +G +   D D GD   VTLS+
Sbjct: 589 IIDQNDNSPVFTHNEYNFYVPE----NLPRHGTVGLITVTDPDYGDNSAVTLSI 638



 Score = 38.1 bits (87), Expect = 7.9,   Method: Compositional matrix adjust.
 Identities = 36/139 (25%), Positives = 67/139 (48%), Gaps = 15/139 (10%)

Query: 103 LDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADL 159
           LD E +D+Y   V   D      +++A + +SV + ND  P F+  + E+ +P     + 
Sbjct: 236 LDREEKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVFKETEIEVSIPE----NA 291

Query: 160 TPGSVIGKVEAADGDKGDRVTLS------LRGPYEKMFSIN-DSGHISIVD-LSALNTST 211
             G+ + ++ A D D G+   +       +     ++F +N  +G I+I + L    T  
Sbjct: 292 PVGTSVTQLHATDADIGENAKIHFSFSNLVSNIARRLFHLNATTGLITIKEPLDREETPN 351

Query: 212 IQLVVVATDTGNPPRQASV 230
            +L+V+A+D G  P +A V
Sbjct: 352 HKLLVLASDGGLMPARAMV 370


>gi|397516069|ref|XP_003828261.1| PREDICTED: cadherin-related family member 1 [Pan paniscus]
          Length = 859

 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 64/211 (30%), Positives = 96/211 (45%), Gaps = 29/211 (13%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTTNKPRDL----RVKYWLSNDYGERFSISRQGDISL 99
           +F +  Y     E++P   ++  V     RD      V Y+L N +   F++ R   +  
Sbjct: 134 RFIQEPYVALVPEDIPAGSIIFKVHAVD-RDTGSGGSVTYFLQNLHSP-FAVDRHSGVLR 191

Query: 100 MQC---LDYETEDSYRFTVYA---------TDTLMTTSATVNISVVNVNDWDPRFRYPQY 147
           +Q    LDYE   ++  TV A          D + + + TV ++V +V D  P F    Y
Sbjct: 192 LQAGATLDYERSRTHYITVVAKDGGGRLHGADVVFSATTTVTVNVEDVQDMAPVFVGTPY 251

Query: 148 ELFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIND-SGHISIVDL 204
             ++      D  PGS + KV A DGD+G  +R+  SL    +  F IN+ SG ISI   
Sbjct: 252 YGYV----YEDTLPGSEVLKVVAMDGDRGKPNRILYSLVNGSDGAFEINETSGAISITQS 307

Query: 205 SA-LNTSTIQLVVVATD---TGNPPRQASVP 231
            A L     +L V  T+   TG+P  QA+VP
Sbjct: 308 PAQLQREVYELHVQVTEMSPTGSPAAQATVP 338



 Score = 40.4 bits (93), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 53/175 (30%), Positives = 78/175 (44%), Gaps = 12/175 (6%)

Query: 56  ENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGER--FSISRQ-GDISLMQCLDYETEDSYR 112
           E+ PV   + T+    P    + Y +S D   R  FS+    G+I+L++ LD E ED   
Sbjct: 46  EDTPVGSHVYTLNGTDPEGDPISYHISFDPSARSVFSVDPTFGNITLVEELDREREDEIE 105

Query: 113 FTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAAD 172
             +  +D L   +  V I V + ND  PRF    Y   +P     D+  GS+I KV A D
Sbjct: 106 AIISISDGLNLVAEKVVILVTDANDEAPRFIQEPYVALVPE----DIPAGSIIFKVHAVD 161

Query: 173 GD--KGDRVTLSLRGPYEKMFSINDSGHISIVDLSALN---TSTIQLVVVATDTG 222
            D   G  VT  L+  +        SG + +   + L+   + T  + VVA D G
Sbjct: 162 RDTGSGGSVTYFLQNLHSPFAVDRHSGVLRLQAGATLDYERSRTHYITVVAKDGG 216


>gi|380811826|gb|AFE77788.1| protocadherin-11 X-linked isoform e precursor [Macaca mulatta]
          Length = 1339

 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 75/277 (27%), Positives = 119/277 (42%), Gaps = 59/277 (21%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGERFSI------------- 91
           F+ NEY+    ENLP +  +  +T   P           DYGE  ++             
Sbjct: 570 FTHNEYNFYVPENLPKHGTVGLITVTDP-----------DYGENSAVTLSILDENDGFTI 618

Query: 92  -SRQGDISLMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYP-- 145
            S+ G I      D E ++SY F V A D      ++SA V I+VV+VND  P F  P  
Sbjct: 619 DSKTGVIRPNISFDREKQESYTFYVKAEDGGRVSRSSSAKVTINVVDVNDNKPVFIVPPS 678

Query: 146 --QYELFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEK-MFSIND-SGHI 199
              YEL LP        PG+V+ +V A D D G    V  S+ G   + +F IN+ +G+I
Sbjct: 679 NYSYELVLP-----STDPGTVVFQVIAVDNDTGMNAEVRYSIVGENTRDLFEINETTGNI 733

Query: 200 SIVDLSALNTSTIQLVVV-ATDTGNPPRQASVPAIMHFPEAIVQQAS------------- 245
            + +   +    +  V+V A D G P    SV  +  F    V  A+             
Sbjct: 734 IMKEKCDVTDLGLHRVLVKANDLGQPDSLFSVVTVNLFVNESVTNATLINELLHKSTEAP 793

Query: 246 ----SKLNSGTSSTVLIILGVVLIVLGFVIILLILYI 278
               +++   +S T+  +  +V +V G + +++++ I
Sbjct: 794 VTPNTEIADASSPTIDYVKILVAVVAGTITVVVVISI 830



 Score = 55.5 bits (132), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 36/114 (31%), Positives = 61/114 (53%), Gaps = 10/114 (8%)

Query: 76  RVKYWLSNDYGERFSISRQ-GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNIS 131
            + + L  D    FS+ R+ G +++++ LD E E+ Y FTV A D     +T++ TV +S
Sbjct: 500 EINFLLGPDAPPEFSLDRRTGMLTVLKKLDREKEEKYFFTVLAKDNGVPPLTSNVTVFVS 559

Query: 132 VVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDR--VTLSL 183
           V++ ND  P F + +Y  ++P     +L     +G +   D D G+   VTLS+
Sbjct: 560 VIDQNDNSPAFTHNEYNFYVPE----NLPKHGTVGLITVTDPDYGENSAVTLSI 609



 Score = 39.3 bits (90), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 38/139 (27%), Positives = 69/139 (49%), Gaps = 15/139 (10%)

Query: 103 LDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADL 159
           LD E +D+Y   V   D      +++A + +SV + ND  P F+  + E+ +P     + 
Sbjct: 207 LDREEKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVFKETEIEVSIPE----NA 262

Query: 160 TPGSVIGKVEAADGDKGD--RVTLSLRGPY----EKMFSIND-SGHISIVD-LSALNTST 211
             G+ + ++ A D D G+  R+  S         +++F +N  +G I+I + L    T  
Sbjct: 263 PVGTSVTQLHATDADIGENARIHFSFSNLVSNIAKRLFHLNSTTGLITIKEPLDREETPN 322

Query: 212 IQLVVVATDTGNPPRQASV 230
            +L+V+A+D G  P +A V
Sbjct: 323 HKLLVLASDGGLVPARAMV 341


>gi|326663971|ref|XP_001343759.4| PREDICTED: protocadherin-23-like [Danio rerio]
          Length = 3222

 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 58/186 (31%), Positives = 89/186 (47%), Gaps = 19/186 (10%)

Query: 51   SVSALENLPVNYVLLTVTTNKPRDLR--VKYWL--SNDYGERFSIS-RQGDISLMQCLDY 105
            +V+  ENLP+ Y++  V  N   DL     Y L   +D    F+I    G I+  + LDY
Sbjct: 2204 AVTIAENLPLGYIVTRVIAND-VDLSPSATYRLIEKDDTSRSFAIDLYTGIITTTKILDY 2262

Query: 106  ETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVI 165
            E +  Y   V A+D++  T A ++I V++VND  P F    Y++ L    LAD    + +
Sbjct: 2263 EEQSVYTLKVQASDSVHQTEAELSIQVLDVNDNSPVFSQESYQVLLSERTLAD----TFV 2318

Query: 166  GKVEAADGDKGDRVTLSLR---GPYEKMFSINDSGHISIVDLSAL----NTSTIQLVVVA 218
              V A D D G    +S R    P    +   D+G  S+     L    N + ++L+V A
Sbjct: 2319 VSVLATDKDSGKNGRVSYRLLSSPVGGFYIDPDNG--SVFTNKPLNYVANGNVLRLLVEA 2376

Query: 219  TDTGNP 224
             D+G+P
Sbjct: 2377 RDSGDP 2382



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 49/138 (35%), Positives = 68/138 (49%), Gaps = 15/138 (10%)

Query: 95   GDISLMQCLDYETEDSYRFTVYAT--DTLMTTSATVNISVVNVNDWDPRFRYPQYELFLP 152
            G + + Q LDYETE SYRF V A   ++ M  +ATV + V + ND  P F    Y   + 
Sbjct: 1040 GWMFVSQSLDYETEPSYRFCVCAKAQNSKMEATATVVVMVQDENDNAPVFSRDVYFFSVQ 1099

Query: 153  HIPLADLTPGSVIGKVEAADGDKGDRVTLSL----RGPYEKMFSIND-SGH-ISIVDLSA 206
              P    +P  +IG V+A+D D  +   LS      G Y   FS+N  +G  I++V L  
Sbjct: 1100 EGP----SPHGLIGTVKASDRDSLNNGVLSFILLTDGKY---FSVNSRTGEIINLVALDR 1152

Query: 207  LNTSTIQLVVVATDTGNP 224
               +   L V+ TD G P
Sbjct: 1153 EEQAQHVLRVMVTDQGRP 1170



 Score = 48.5 bits (114), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 75/299 (25%), Positives = 122/299 (40%), Gaps = 34/299 (11%)

Query: 50   YSVSALENLPV---------------NYVLLTVTTNKPRDLRVKYWLSN-DYGERFSIS- 92
            Y+ S  ENLP                 + LL+ +   P    V Y  SN D  E F I  
Sbjct: 2632 YNCSVSENLPAFTPVCTVHAVDEDAGTFGLLSYSIVTP--CFVDYDSSNPDKKEAFGIDP 2689

Query: 93   RQGDISLMQCLDYETEDSYRFTVYATDTL-MTTSATVNISVVNVNDWDPRFRYPQYELFL 151
              GDI   Q  DYE + ++ F V A D      +  V I +  ++++ P F    Y   L
Sbjct: 2690 LTGDIHTKQTFDYEGDRNFCFVVEARDKGDQVATLRVRIEIEGIDEFSPIFTQNVYHFSL 2749

Query: 152  PHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDSGHISIVDLSAL-- 207
            P  P      G  IG + A D D G    V  SL  P    F++N +     V  S    
Sbjct: 2750 PANPKV----GQSIGYLMAMDHDGGLDGLVEYSLVSP-SSFFNVNKTNGCLFVSNSVYQR 2804

Query: 208  -----NTSTIQLVVVATDTGNPPRQASVPAIMHFPEAIVQQASSKLNSGTSSTVLIILGV 262
                 N +T  L+V+A+      R ++   I++        AS+  +  T++  ++++  
Sbjct: 2805 QSPISNETTEDLIVLASSPKLDSRSSTCHVIVNISSTTKALASADFSVHTATLSVLLMMF 2864

Query: 263  VLIVLGFVIILLILYIHKNKHTKNNGPPGSSHSKNDSFLSNVILPEKHVNVVAIPKIQE 321
            ++++L F+ ++L     KN   K      + +S+ DSF +        VN + +  +QE
Sbjct: 2865 LILLLSFIALVLRCRSKKNATKKTPSLSANLNSETDSFETTAGNLHNTVNGINLQDLQE 2923



 Score = 48.1 bits (113), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 53/203 (26%), Positives = 96/203 (47%), Gaps = 30/203 (14%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKP----RDLRVKYWL-SNDYGERFSI-------- 91
            F++N Y ++  E++ V   L+T+          +  ++Y + S +   RF +        
Sbjct: 2404 FTQNSYQINIPEDVSVGSTLITLLAEDKDYSDENTHLEYLIISGNDERRFCLEVVSIQAE 2463

Query: 92   --SRQ-GDISLMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYP 145
              SR  G + L   LD ET D+Y  TV  TD     + +S  V++ V+++ND  P F  P
Sbjct: 2464 PHSRTVGQLVLCDTLDRETTDAYSLTVTVTDRGINPLNSSTVVSVKVLDINDNAPAFSSP 2523

Query: 146  QYELFLPHIPLADLTP-GSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSINDSGHISI 201
            +Y     H  +++ +P G V+ +V A D D G   T++   + G  + + +++ S  +  
Sbjct: 2524 EY-----HAQVSENSPVGLVLVQVSAYDPDLGANGTITYNIISGNSKGLITVDSSTGVIK 2578

Query: 202  VD--LSALNTSTIQLVVVATDTG 222
            V+  L     + + L V A+D G
Sbjct: 2579 VNGTLDYEEDTKLTLTVQASDWG 2601



 Score = 44.7 bits (104), Expect = 0.079,   Method: Compositional matrix adjust.
 Identities = 57/191 (29%), Positives = 94/191 (49%), Gaps = 17/191 (8%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRDLR--VKYWLSN-DYGERFSISRQ-GDISLM 100
           F K +Y+ S  E+ PV   +  V    P +    V Y +S+ D    FSI  Q G I+  
Sbjct: 770 FQKAQYTFSISEDAPVGSSVGLVQAITPANSVEVVSYVISSGDPQGFFSIDSQTGIINTA 829

Query: 101 QCLDYETEDSYRFTV-YATDTL-MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLAD 158
           Q LD+E+       + + T TL + +SA VN+S+ ++ND  P F+         HI ++ 
Sbjct: 830 QPLDHESISYVILNIQFHTGTLPIHSSAQVNVSITDINDNPPVFQKTS-----EHITISR 884

Query: 159 LT-PGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDSGHISIV--DLSALNTSTIQ 213
            T PG+ +    A D D G   R+   L  P   +F+I+ +    ++  D+S  ++S  +
Sbjct: 885 TTPPGTPLFIAHAHDTDSGFNGRIHYMLH-PKSHLFTIHPNLGTLMLNGDVSRDSSSRYE 943

Query: 214 LVVVATDTGNP 224
           L ++A D G+P
Sbjct: 944 LSIIAEDEGHP 954



 Score = 42.7 bits (99), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 45/160 (28%), Positives = 76/160 (47%), Gaps = 18/160 (11%)

Query: 89  FSISRQGDISLMQC----LDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPR 141
           FS+    D   + C    LD E +D Y  TV A+D     +++  T  I V +VND  P 
Sbjct: 392 FSLRSMDDFLYVLCVDGPLDREIKDLYELTVTASDYGCPPLSSVITFQIQVTDVNDNPPV 451

Query: 142 FRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKM-FSINDSGH 198
           F    YE  +      D+  G+ + +V+A D D G    +  S+    +K  F+I+ +  
Sbjct: 452 FHQTIYEESIDE----DVRVGTAVFRVKATDKDLGGDSEIIYSIVQSEQKCPFNIDPTLG 507

Query: 199 ISIVDLSALN---TSTIQLVVVATDTGNPPRQASVPAIMH 235
           + I   +AL+      ++ +VVA+D G+P   ++   I+H
Sbjct: 508 V-ITTAAALDHERERELRFLVVASDGGSPSLSSTATVIIH 546



 Score = 40.8 bits (94), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 44/143 (30%), Positives = 58/143 (40%), Gaps = 16/143 (11%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLS------NDYGERFSISRQGDIS 98
            FS  EY     EN PV  VL+ V+   P DL     ++      N  G     S  G I 
Sbjct: 2520 FSSPEYHAQVSENSPVGLVLVQVSAYDP-DLGANGTITYNIISGNSKGLITVDSSTGVIK 2578

Query: 99   LMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNV-----NDWDPRFRYPQYELFLPH 153
            +   LDYE +     TV A+D   +    V+ +VV +     ND  P F +P Y   +  
Sbjct: 2579 VNGTLDYEEDTKLTLTVQASDWGTSDDKKVSFAVVYILVLDENDNSPFFMFPTYNCSVSE 2638

Query: 154  IPLADLTPGSVIGKVEAADGDKG 176
              L   TP   +  V A D D G
Sbjct: 2639 -NLPAFTP---VCTVHAVDEDAG 2657


>gi|194213731|ref|XP_001918122.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin-16 [Equus caballus]
          Length = 3293

 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 61/186 (32%), Positives = 94/186 (50%), Gaps = 21/186 (11%)

Query: 56  ENLPVNYVLLTVTTNKPRDLRVKYW-LSNDYGE-RFSISRQGDISLMQC----LDYETED 109
           E  P   ++  ++ + P D    +  +S + GE  F++S Q  +  + C    LD E  D
Sbjct: 372 EAAPPGQLVARISVSDPDDGDFAHVNVSLEGGEGHFALSTQDSVIYLVCVARRLDREERD 431

Query: 110 SYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLT-PGSVI 165
           +Y   V ATD+    +   AT  + V +VND  P F     +L+ P  PL ++  PGS +
Sbjct: 432 AYNLRVTATDSGSPPLRAEATFVLHVTDVNDNAPAF---DRQLYRPE-PLPEVALPGSFV 487

Query: 166 GKVEAADGDKG--DRVTLSLR-GPYEKMFSINDSGHISIVDLSALN---TSTIQLVVVAT 219
            +V A D D+G   +VT SL  G + + FSI+ +  I I   ++L+       QL+VVAT
Sbjct: 488 VRVMAQDPDQGTNGQVTYSLAPGAHNRWFSIDPTSGI-ITTAASLDYELEPQPQLIVVAT 546

Query: 220 DTGNPP 225
           D G PP
Sbjct: 547 DGGLPP 552



 Score = 55.5 bits (132), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 65/215 (30%), Positives = 93/215 (43%), Gaps = 28/215 (13%)

Query: 31   LIVSKAGTSLRELQFSKNEYSVSALENLPVNYV----LLTVTTNKPRDLRVKYWLSNDY- 85
            ++V   GT      F    Y V    +LP   +    +L V    P    V Y L+ D  
Sbjct: 981  VVVQDLGTRGLAPHFDSPTYRV----DLPSGTIPGTQVLQVQARAPDGGPVTYHLAADGP 1036

Query: 86   GERFSISRQ-GDISLMQCLDYETEDSYRFTVYATDT------LMTTSATVNISVVNVNDW 138
               F +  Q G + +   LD E ++ Y   V A           T +ATV IS++N ND 
Sbjct: 1037 SSPFGLEPQSGWLWVRAALDREAQELYTLKVMAVSGSKAELGQQTGTATVRISILNQNDH 1096

Query: 139  DPRF-RYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYE--KMFSI 193
             PR    P +     + P     PG+ +G+V A D D G   R+T SLR   E  K F I
Sbjct: 1097 SPRLSEEPTFLAVAENQP-----PGTSVGRVFATDRDSGPNGRLTYSLRQLSEDSKAFRI 1151

Query: 194  N-DSGHISIVD-LSALNTSTIQLVVVATDTGNPPR 226
            +  +G ++ +  L     S+ QL+V   D G+PPR
Sbjct: 1152 HPQTGEVTTLQTLDRERQSSYQLLVQVQDAGSPPR 1186



 Score = 54.7 bits (130), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 68/252 (26%), Positives = 119/252 (47%), Gaps = 37/252 (14%)

Query: 14   VVRAIQYDNQDRYALATLIVSKAGTSLRELQ---------FSKNEYS---------VSAL 55
            V  A+  + Q+ Y L  + VS +   L +            ++N++S         ++  
Sbjct: 1051 VRAALDREAQELYTLKVMAVSGSKAELGQQTGTATVRISILNQNDHSPRLSEEPTFLAVA 1110

Query: 56   ENLP----VNYVLLTVTTNKPRDLRVKYWLS--NDYGERFSISRQ-GDISLMQCLDYETE 108
            EN P    V  V  T   + P   R+ Y L   ++  + F I  Q G+++ +Q LD E +
Sbjct: 1111 ENQPPGTSVGRVFATDRDSGPNG-RLTYSLRQLSEDSKAFRIHPQTGEVTTLQTLDRERQ 1169

Query: 109  DSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYEL--FLPHIPLAD-LTPG 162
             SY+  V   D      +T+ TV+I+V+++ND  P F          LP I + D + PG
Sbjct: 1170 SSYQLLVQVQDAGSPPRSTTGTVHIAVLDLNDNSPTFLQASGAAGGGLP-IQVPDRVPPG 1228

Query: 163  SVIGKVEAADGDKGDRVTL--SLRGPYEKMFSIN-DSGH-ISIVDLSALNTSTIQLVVVA 218
            +++  ++A D D+G+  T+  +L GP  ++FS++  SG  ++   L         L + A
Sbjct: 1229 TLVTTLQAKDPDEGENGTILYTLTGPGSELFSLHPHSGELLTAAPLIRAERPHYVLTLSA 1288

Query: 219  TDTGNPPRQASV 230
             D G+PPR +S+
Sbjct: 1289 HDQGSPPRSSSL 1300



 Score = 54.7 bits (130), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 68/256 (26%), Positives = 110/256 (42%), Gaps = 46/256 (17%)

Query: 11   ITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLT---- 66
            + +V+ A  +    R A AT+ V     +     F+   Y V+  E+LP    LLT    
Sbjct: 2443 VDVVLEARDHGMPGRAARATVHVQLQDQNDHAPSFTLPHYRVAVAEDLPPGSTLLTLEAT 2502

Query: 67   ---------------VTTNKPRDLRVKYWLSNDYGERFSISRQ--GDISLMQCLDYETED 109
                           V+ N+ R  +++  L+ + GE   +  +  G + L++ LD+E+  
Sbjct: 2503 DADGSRTHATVDYSIVSGNRGRVFQLEPRLA-ETGEGGGLGPRALGCLVLLEPLDFESLT 2561

Query: 110  SYRFTVYATDTLM---TTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIG 166
             Y  TV A D      +++  V ++V++VND  P F    Y + +P     D   G+ + 
Sbjct: 2562 QYNLTVAAADRGQPPRSSAVPVTVTVLDVNDNPPVFTRASYRMAVPE----DTPVGAELL 2617

Query: 167  KVEAADGDKGD----RVTLSLRGPYEKMFSIND-SGHISIV-DLSALNTSTIQLVVVATD 220
             VEA+D D G     R TLS   P   +F +++ SG + +   L     +  QLVV A D
Sbjct: 2618 HVEASDADPGPHGLVRFTLSSGDPL-GLFELDESSGALRLTRPLDCETQAQHQLVVQAAD 2676

Query: 221  TGNPPRQASVPAIMHF 236
                      PA  HF
Sbjct: 2677 ----------PAGAHF 2682



 Score = 54.3 bits (129), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 56/197 (28%), Positives = 83/197 (42%), Gaps = 12/197 (6%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKP---RDLRVKYWLSNDYGERFSIS-RQGDISLM 100
            F    YSV   E+ P   +LL +  + P    +  V Y+L       F +    G++   
Sbjct: 1850 FPVPAYSVEVPEDAPAGTLLLQLQAHDPDAGANGHVTYYLGAGAAGAFLLEPSSGELRTA 1909

Query: 101  QCLDYETEDSYRFTVYATDTL----MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
              LD E   SY F+V A D      ++T+  V I+V +VND  P F      L LP    
Sbjct: 1910 AALDREQCASYAFSVSAVDGAAAGPLSTTVPVTITVRDVNDHAPTFPTSPLRLRLPRPGP 1969

Query: 157  ADLTPGSVIGKVEAADGDKGDRVTL--SLRGPYEKMFSIND-SGHISIVDLS-ALNTSTI 212
            +  TP   +  + A D D G   ++   L G      +++  +G I +     AL     
Sbjct: 1970 SLSTPTLPLATLRAEDRDAGANASILYRLAGTPPPGTTVDSYTGEIRVARSPVALGPRDR 2029

Query: 213  QLVVVATDTGNPPRQAS 229
             L +VATD G P R A+
Sbjct: 2030 VLFIVATDLGRPARSAT 2046



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 46/146 (31%), Positives = 64/146 (43%), Gaps = 5/146 (3%)

Query: 13   LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTV-TTNK 71
            L V A  + +  R A   L +S A  +     F + EYSV   EN P    LLT+  T+ 
Sbjct: 1612 LTVVASDHGSPPRSATQLLTISVADINDEAPAFQQQEYSVLLRENSPPGTSLLTLRATDS 1671

Query: 72   PRDLRVKYWLSNDYGERFSISRQ-GDISLMQCLDYETEDSYRFTVYATD---TLMTTSAT 127
                  +       GERFS+    G ++ +Q LD E E+    TVYA D     + T  T
Sbjct: 1672 DLGANGQVTYGGISGERFSLDPDTGVLTTLQALDREEEEEINLTVYARDGGSPPLLTHVT 1731

Query: 128  VNISVVNVNDWDPRFRYPQYELFLPH 153
            V ++V + ND  P F      L +P 
Sbjct: 1732 VRVAVEDENDHAPTFGSAHLSLEVPE 1757



 Score = 51.6 bits (122), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 60/199 (30%), Positives = 91/199 (45%), Gaps = 28/199 (14%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTN----KPRDLRVKYWLSNDYGERFSI----SRQGD 96
            F++  Y ++  E+ PV   LL V  +     P  L V++ LS+  G+   +       G 
Sbjct: 2597 FTRASYRMAVPEDTPVGAELLHVEASDADPGPHGL-VRFTLSS--GDPLGLFELDESSGA 2653

Query: 97   ISLMQCLDYETEDSYRFTVYATDTLMT--TSATVNISVVNVNDWDPRFRYPQYELFLPHI 154
            + L + LD ET+  ++  V A D        A V I V +VND  P F      L L   
Sbjct: 2654 LRLTRPLDCETQAQHQLVVQAADPAGAHFALAPVTIEVQDVNDHSPAF-----PLSLLST 2708

Query: 155  PLAD-LTPGSVIGKVEAADGDKGD----RVTLSLRGP---YEKMFSINDS-GHI-SIVDL 204
             LA+   PG+++  + A DGD G     R +L   GP     + F++N S G + + V  
Sbjct: 2709 SLAENQPPGTLVTTLHAIDGDAGAFGRLRYSLLEAGPGPEGREAFALNSSTGELRARVAF 2768

Query: 205  SALNTSTIQLVVVATDTGN 223
               +T + QL+V A D GN
Sbjct: 2769 DYEHTGSFQLLVGAADAGN 2787



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 46/148 (31%), Positives = 63/148 (42%), Gaps = 13/148 (8%)

Query: 89   FSISRQGD-ISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQY 147
            FSI R G  +SL   LD+E  D Y   + A D      A + + V +VND  P F    Y
Sbjct: 2317 FSIGRYGGRLSLTGPLDFEQRDRYHLQLLAHDGPHEGRANLTVLVEDVNDNAPAFSQSLY 2376

Query: 148  E-LFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSINDSGH-----IS 200
            + + L H P     PGS I  V A D D G    +S       + FS++ +       + 
Sbjct: 2377 QVMLLEHTP-----PGSAILSVSATDRDSGANGHISYHLASSAEGFSVDPNNGTLFTTLG 2431

Query: 201  IVDLSALNTSTIQLVVVATDTGNPPRQA 228
             V L       + +V+ A D G P R A
Sbjct: 2432 TVALGREGPGVVDVVLEARDHGMPGRAA 2459



 Score = 45.8 bits (107), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 37/106 (34%), Positives = 53/106 (50%), Gaps = 9/106 (8%)

Query: 76  RVKYWLSNDYGER-FSIS-RQGDISLMQCLDYETEDSYRFTVYATD---TLMTTSATVNI 130
           +V Y L+     R FSI    G I+    LDYE E   +  V ATD     + +SATV++
Sbjct: 502 QVTYSLAPGAHNRWFSIDPTSGIITTAASLDYELEPQPQLIVVATDGGLPPLVSSATVSV 561

Query: 131 SVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG 176
           ++ +VND +P+F+   Y   LP        PG+   +V A D D G
Sbjct: 562 ALQDVNDNEPQFQRTFYNASLPE----GTQPGTCFLQVTATDADSG 603



 Score = 44.3 bits (103), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 56/219 (25%), Positives = 86/219 (39%), Gaps = 39/219 (17%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDL----RVKYWLSNDYGERFSISRQGDISLM 100
            FS++ Y V  LE+ P    +L+V+    RD      + Y L++   E FS+         
Sbjct: 2371 FSQSLYQVMLLEHTPPGSAILSVSATD-RDSGANGHISYHLASS-AEGFSVDPNNGTLFT 2428

Query: 101  Q----CLDYETEDSYRFTVYATDTLM---TTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
                  L  E        + A D  M      ATV++ + + ND  P F  P Y + +  
Sbjct: 2429 TLGTVALGREGPGVVDVVLEARDHGMPGRAARATVHVQLQDQNDHAPSFTLPHYRVAV-- 2486

Query: 154  IPLADLTPGSVIGKVEAADGDKGDRVTLSL-----RGPYEKMFSI-------NDSGHISI 201
                DL PGS +  +EA D D G R   ++      G   ++F +        + G +  
Sbjct: 2487 --AEDLPPGSTLLTLEATDAD-GSRTHATVDYSIVSGNRGRVFQLEPRLAETGEGGGLGP 2543

Query: 202  VDLSAL---------NTSTIQLVVVATDTGNPPRQASVP 231
              L  L         + +   L V A D G PPR ++VP
Sbjct: 2544 RALGCLVLLEPLDFESLTQYNLTVAAADRGQPPRSSAVP 2582



 Score = 43.9 bits (102), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 57/198 (28%), Positives = 85/198 (42%), Gaps = 21/198 (10%)

Query: 42  ELQFSKNEYSVSALENLPVNYVLLTVTT----NKPRDLRVKYWLSNDYGER----FSI-S 92
           E QF +  Y+ S  E        L VT     + P  L + Y L    G      F I +
Sbjct: 570 EPQFQRTFYNASLPEGTQPGTCFLQVTATDADSGPFGL-LSYSLGAGLGASGSPPFRIDA 628

Query: 93  RQGDISLMQCLDY-ETEDSYRFTVYATDTLMTTSAT-VNISVVNVNDWDPRFRYPQYELF 150
             GD+   + LD  +   S+ FTV A D     S   V + V + ND  P+F   +Y   
Sbjct: 629 HSGDVCTTRTLDRDQGPSSFDFTVTAVDGGGLKSMVYVKVFVSDENDNRPQFYPREYAAS 688

Query: 151 LPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIND-SGHISIV-DLS 205
           L     A   PG+ + +V A D D+G    LS   L G    +F++++ SG +++   L+
Sbjct: 689 L----SAQSAPGTAVLRVRAHDPDQGPHGRLSYHILAGNSPPLFALDEHSGLLTVAWPLA 744

Query: 206 ALNTSTIQLVVVATDTGN 223
               S +QL + A D G 
Sbjct: 745 RRANSVVQLEIGAQDGGG 762



 Score = 40.8 bits (94), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 23/85 (27%), Positives = 44/85 (51%), Gaps = 7/85 (8%)

Query: 95   GDISLMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFL 151
            G+   M+ LD E E +++  + A D     ++ +  V ++V++ ND  P F  P Y + +
Sbjct: 1800 GEFGTMRPLDREVEPAFQMKIEARDGGQPALSATLLVTVTVLDANDHAPAFPVPAYSVEV 1859

Query: 152  PHIPLADLTPGSVIGKVEAADGDKG 176
            P     D   G+++ +++A D D G
Sbjct: 1860 PE----DAPAGTLLLQLQAHDPDAG 1880



 Score = 40.4 bits (93), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 32/105 (30%), Positives = 51/105 (48%), Gaps = 8/105 (7%)

Query: 126 ATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSL 183
           A V + + +VND  P F  P+  + LP        PG++I  + A D D G   RVT +L
Sbjct: 873 ARVRVLLDDVNDNSPAFPAPEDTVLLP----PSTAPGTLIYTLRALDPDSGVNSRVTFTL 928

Query: 184 RGPYEKMFSINDS-GHISIV-DLSALNTSTIQLVVVATDTGNPPR 226
                  F+++ + GH+ ++  L        +L + A D G+PPR
Sbjct: 929 LAGGGGAFTVDPTMGHVRLMGSLGPPGGPAHELELEARDGGSPPR 973



 Score = 38.5 bits (88), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 45/163 (27%), Positives = 70/163 (42%), Gaps = 22/163 (13%)

Query: 89  FSI-SRQGDISLMQCLDYETEDSYRFTVYATDTLMTT---SATVNISVVNVNDWDPRFRY 144
           FSI +  G + L + LD+E    +   V A D        SA V + V + ND  P    
Sbjct: 300 FSIDAHTGLLRLERPLDFEQRRVHELVVQARDGGAHPELGSAFVTVHVRDANDNQPSMTV 359

Query: 145 PQYELFL-----PHIPLADLTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSINDSG 197
               +FL     P +  A   PG ++ ++  +D D GD   V +SL G  E  F+++   
Sbjct: 360 ----IFLSADGSPRVSEA-APPGQLVARISVSDPDDGDFAHVNVSLEG-GEGHFALSTQD 413

Query: 198 HISIV-----DLSALNTSTIQLVVVATDTGNPPRQASVPAIMH 235
            +  +      L         L V ATD+G+PP +A    ++H
Sbjct: 414 SVIYLVCVARRLDREERDAYNLRVTATDSGSPPLRAEATFVLH 456


>gi|32966125|gb|AAP92137.1| protocadherin X short isoform [Pongo pygmaeus]
          Length = 1025

 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 68/216 (31%), Positives = 100/216 (46%), Gaps = 20/216 (9%)

Query: 45  FSKNEYSVSALENLPVNYV--LLTVTTNKPRDLRVKYWLSNDYGERFSISRQ-GDISLMQ 101
           F+ NEY+    ENLP +    L+TVT     D         D  + F+I  Q G I    
Sbjct: 570 FTHNEYNFYVPENLPRHGTVGLITVTDPDYGDNSAVTLSILDENDDFTIDSQTGVIRPNI 629

Query: 102 CLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYP----QYELFLPHI 154
             D E ++SY F V A D      ++SA V I+VV+VND  P F  P     YEL LP  
Sbjct: 630 SFDREKQESYTFYVKAEDGGRVSRSSSAKVTINVVDVNDNKPVFIVPPSNYSYELVLPST 689

Query: 155 PLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-DSGHISIVDLSALNTS 210
                 PG+V+ +V A D D G    +    + G    +F+I+ ++G+I++++   +   
Sbjct: 690 -----NPGTVVFQVIAVDNDTGMNAEVRYSIVGGNTRDLFAIDQETGNITLMEKCDVTDL 744

Query: 211 TIQLVVV-ATDTGNPPRQASVPAIMHFPEAIVQQAS 245
            +  V+V A D G P    SV  +  F    V  A+
Sbjct: 745 GLHRVLVKANDLGQPDSLFSVVIVNLFVNESVTNAT 780



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/114 (32%), Positives = 61/114 (53%), Gaps = 10/114 (8%)

Query: 76  RVKYWLSNDYGERFSISRQ-GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNIS 131
            + Y L  D    FS+ R+ G +++++ LD E ED Y FT+ A D     +T++ TV +S
Sbjct: 500 EINYLLGPDAPPEFSLDRRTGMLTVVKKLDREKEDKYLFTILAKDNGVPPLTSNVTVFVS 559

Query: 132 VVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDR--VTLSL 183
           +++ ND  P F + +Y  ++P     +L     +G +   D D GD   VTLS+
Sbjct: 560 IIDQNDNSPVFTHNEYNFYVPE----NLPRHGTVGLITVTDPDYGDNSAVTLSI 609



 Score = 38.1 bits (87), Expect = 7.7,   Method: Compositional matrix adjust.
 Identities = 36/139 (25%), Positives = 67/139 (48%), Gaps = 15/139 (10%)

Query: 103 LDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADL 159
           LD E +D+Y   V   D      +++A + +SV + ND  P F+  + E+ +P     + 
Sbjct: 207 LDREEKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVFKETEIEVSIPE----NA 262

Query: 160 TPGSVIGKVEAADGDKGDRVTLS------LRGPYEKMFSIN-DSGHISIVD-LSALNTST 211
             G+ + ++ A D D G+   +       +     ++F +N  +G I+I + L    T  
Sbjct: 263 PVGTSVTQLHATDADIGENAKIHFSFSNLVSNIARRLFHLNATTGLITIKEPLDREETPN 322

Query: 212 IQLVVVATDTGNPPRQASV 230
            +L+V+A+D G  P +A V
Sbjct: 323 HKLLVLASDGGLMPARAMV 341


>gi|336244967|gb|AEI28401.1| FAT tumor suppressor-like protein 4, partial [Dibamus bourreti]
          Length = 254

 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 56/192 (29%), Positives = 97/192 (50%), Gaps = 12/192 (6%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRDLR--VKYWLS-NDYGERFSISRQ-GDISLM 100
           FS+  YS    EN+ + Y +  V+ +   DL   + Y ++  D    F I++  G I+  
Sbjct: 4   FSQGIYSFVVFENVALGYHVGRVSAST-MDLNTNITYLITTGDQKGVFEINKMTGLITTA 62

Query: 101 QCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLT 160
             +D E +  Y+  V A+   +T  A VNI+V ++ND  P F +    + +    + + +
Sbjct: 63  SIIDREEQAFYQLKVVASGGAITGDALVNITVRDLNDNSPHFLHAVESVNV----VENWS 118

Query: 161 PGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIND-SGHISIVDLSALNTSTIQLVVV 217
            G  I + +A D D+G    V  SL+   + +FSI++ SG IS+     +N  T Q+ ++
Sbjct: 119 TGHTIFQAKAMDPDQGVNGMVLYSLKQNPKNLFSIDEQSGAISLTAPLDINAGTYQVEIL 178

Query: 218 ATDTGNPPRQAS 229
           A+D G P R +S
Sbjct: 179 ASDLGVPQRSSS 190


>gi|32330109|gb|AAP79575.1| protocadherinX precursor [Gorilla gorilla]
          Length = 1025

 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 68/216 (31%), Positives = 100/216 (46%), Gaps = 20/216 (9%)

Query: 45  FSKNEYSVSALENLPVNYV--LLTVTTNKPRDLRVKYWLSNDYGERFSISRQ-GDISLMQ 101
           F+ NEY+    ENLP +    L+TVT     D         D  + F+I  Q G I    
Sbjct: 570 FTHNEYNFYVPENLPRHGTVGLITVTDPDYGDNSAVTLSILDENDDFTIDSQTGVIRPNI 629

Query: 102 CLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYP----QYELFLPHI 154
             D E ++SY F V A D      ++SA V I+VV+VND  P F  P     YEL LP  
Sbjct: 630 SFDREKQESYTFYVKAEDGGRVSRSSSAKVTINVVDVNDNKPVFIVPPSNYSYELVLPST 689

Query: 155 PLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-DSGHISIVDLSALNTS 210
                 PG+V+ +V A D D G    +    + G    +F+I+ ++G+I++++   +   
Sbjct: 690 -----NPGTVVFQVIAVDNDTGMNAEVRYSIVGGNTRDLFAIDQETGNITLMEKCDVTDL 744

Query: 211 TIQLVVV-ATDTGNPPRQASVPAIMHFPEAIVQQAS 245
            +  V+V A D G P    SV  +  F    V  A+
Sbjct: 745 GLHRVLVKANDLGQPDSLFSVVIVNLFVNESVTNAT 780



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/114 (32%), Positives = 61/114 (53%), Gaps = 10/114 (8%)

Query: 76  RVKYWLSNDYGERFSISRQ-GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNIS 131
            + Y L  D    FS+ R+ G +++++ LD E ED Y FT+ A D     +T++ TV +S
Sbjct: 500 EINYLLGPDAPPEFSLDRRTGMLTVVKKLDREKEDKYLFTILAKDNGVPPLTSNVTVFVS 559

Query: 132 VVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDR--VTLSL 183
           +++ ND  P F + +Y  ++P     +L     +G +   D D GD   VTLS+
Sbjct: 560 IIDQNDNSPVFTHNEYNFYVPE----NLPRHGTVGLITVTDPDYGDNSAVTLSI 609



 Score = 38.1 bits (87), Expect = 7.6,   Method: Compositional matrix adjust.
 Identities = 36/139 (25%), Positives = 67/139 (48%), Gaps = 15/139 (10%)

Query: 103 LDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADL 159
           LD E +D+Y   V   D      +++A + +SV + ND  P F+  + E+ +P     + 
Sbjct: 207 LDREKKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVFKETEIEVSIPE----NA 262

Query: 160 TPGSVIGKVEAADGDKGDRVTLS------LRGPYEKMFSIN-DSGHISIVD-LSALNTST 211
             G+ + ++ A D D G+   +       +     ++F +N  +G I+I + L    T  
Sbjct: 263 PVGTSVTQLHATDADIGENAKIHFSFSNLVSNIARRLFHLNATTGLITIKEPLDREETPN 322

Query: 212 IQLVVVATDTGNPPRQASV 230
            +L+V+A+D G  P +A V
Sbjct: 323 HKLLVLASDGGLMPARAMV 341


>gi|14589946|ref|NP_116755.1| protocadherin-11 Y-linked isoform c [Homo sapiens]
 gi|74762719|sp|Q9BZA8.1|PC11Y_HUMAN RecName: Full=Protocadherin-11 Y-linked; Short=Protocadherin-11;
           AltName: Full=Protocadherin on the Y chromosome;
           Short=PCDH-Y; AltName: Full=Protocadherin prostate
           cancer; Short=Protocadherin-PC; AltName:
           Full=Protocadherin-22; Flags: Precursor
 gi|13161060|gb|AAK13469.1|AF332217_1 protocadherin 11 [Homo sapiens]
 gi|157169592|gb|AAI52898.1| Protocadherin 11 Y-linked [synthetic construct]
 gi|261857964|dbj|BAI45504.1| protocadherin 11 Y-linked [synthetic construct]
          Length = 1340

 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 63/195 (32%), Positives = 92/195 (47%), Gaps = 20/195 (10%)

Query: 45  FSKNEYSVSALENLPVNYV--LLTVTTNKPRDLRVKYWLSNDYGERFSISRQ-GDISLMQ 101
           F+ NEY     ENLP +    L+TVT     D         D  + F+I  Q G I    
Sbjct: 602 FTHNEYKFYVPENLPRHGTVGLITVTDPDYGDNSAVTLSILDENDDFTIDSQTGVIRPNI 661

Query: 102 CLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYP----QYELFLPHI 154
             D E ++SY F V A D      ++SA V I+VV+VND  P F  P     YEL LP  
Sbjct: 662 SFDREKQESYTFYVKAEDGGRVSRSSSAKVTINVVDVNDNKPVFIVPPYNYSYELVLP-- 719

Query: 155 PLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-DSGHISIVDLSALNTS 210
                 PG+V+ +V A D D G    +    + G    +F+I+ ++G+I++++   +   
Sbjct: 720 ---STNPGTVVFQVIAVDNDTGMNAEVRYSIVGGNTRDLFAIDQETGNITLMEKCDVTDL 776

Query: 211 TIQLVVV-ATDTGNP 224
            +  V+V A D G P
Sbjct: 777 GLHRVLVKANDLGQP 791



 Score = 58.2 bits (139), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 44/148 (29%), Positives = 77/148 (52%), Gaps = 13/148 (8%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGERFSISRQ-GDISLM 100
           F+++  +VS  EN      L+ V+    +   +  + Y L  D    FS+ R+ G ++++
Sbjct: 498 FTQSFVTVSIPENNSPGIQLMKVSATDADSGPNAEINYLLGPDAPPEFSLDRRTGMLTVV 557

Query: 101 QCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLA 157
           + LD E ED Y FT+ A D     +T++ TV +S+++ ND  P F + +Y+ ++P     
Sbjct: 558 KKLDREKEDKYLFTILAKDNGVPPLTSNVTVFVSIIDQNDNSPVFTHNEYKFYVPE---- 613

Query: 158 DLTPGSVIGKVEAADGDKGDR--VTLSL 183
           +L     +G +   D D GD   VTLS+
Sbjct: 614 NLPRHGTVGLITVTDPDYGDNSAVTLSI 641



 Score = 38.1 bits (87), Expect = 6.9,   Method: Compositional matrix adjust.
 Identities = 36/139 (25%), Positives = 67/139 (48%), Gaps = 15/139 (10%)

Query: 103 LDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADL 159
           LD E +D+Y   V   D      +++A + +SV + ND  P F+  + E+ +P     + 
Sbjct: 239 LDREEKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVFKETEIEVSIPE----NA 294

Query: 160 TPGSVIGKVEAADGDKGDRVTLS------LRGPYEKMFSIN-DSGHISIVD-LSALNTST 211
             G+ + ++ A D D G+   +       +     ++F +N  +G I+I + L    T  
Sbjct: 295 PVGTSVTQLHATDADIGENAKIHFSFSNLVSNIARRLFHLNATTGLITIKEPLDREETPN 354

Query: 212 IQLVVVATDTGNPPRQASV 230
            +L+V+A+D G  P +A V
Sbjct: 355 HKLLVLASDGGLMPARAMV 373


>gi|15054519|gb|AAK82655.1|AF206516_1 protocadherin-S [Homo sapiens]
          Length = 1347

 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 63/195 (32%), Positives = 93/195 (47%), Gaps = 20/195 (10%)

Query: 45  FSKNEYSVSALENLPVNYV--LLTVTTNKPRDLRVKYWLSNDYGERFSISRQ-GDISLMQ 101
           F+ NEY+    ENLP +    L+TVT     D         D  + F+I  Q G I    
Sbjct: 570 FTHNEYNFYVPENLPRHGTVGLITVTDPDYGDNSAVTLSILDENDDFTIDSQTGVIRPNI 629

Query: 102 CLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYP----QYELFLPHI 154
             D E ++SY F V A D      ++SA V I+VV+VND  P F  P     YEL LP  
Sbjct: 630 SFDREKQESYTFYVKAEDGGRVSRSSSAKVTINVVDVNDNKPVFIVPPSNCSYELVLP-- 687

Query: 155 PLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-DSGHISIVDLSALNTS 210
                 PG+V+ +V A D D G    +    + G    +F+I+ ++G+I++++   +   
Sbjct: 688 ---STNPGTVVFQVIAVDNDTGMNAEVRYSIVGGNTRDLFAIDQETGNITLMEKCDVTDL 744

Query: 211 TIQLVVV-ATDTGNP 224
            +  V+V A D G P
Sbjct: 745 GLHRVLVKANDLGQP 759



 Score = 57.8 bits (138), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 37/114 (32%), Positives = 61/114 (53%), Gaps = 10/114 (8%)

Query: 76  RVKYWLSNDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNIS 131
           ++ Y L  D    FS+  R G +++++ LD E ED Y FT+ A D     +T++ TV +S
Sbjct: 500 KINYLLGPDAPPEFSLDCRTGMLTVVKKLDREKEDKYLFTILAKDNGVPPLTSNVTVFVS 559

Query: 132 VVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDR--VTLSL 183
           +++ ND  P F + +Y  ++P     +L     +G +   D D GD   VTLS+
Sbjct: 560 IIDQNDNSPVFTHNEYNFYVPE----NLPRHGTVGLITVTDPDYGDNSAVTLSI 609


>gi|270288729|ref|NP_001161834.1| protocadherin-11 X-linked isoform g precursor [Homo sapiens]
 gi|61814235|gb|AAX56123.1| protocadherin 11X isoform 7 [Homo sapiens]
          Length = 1310

 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 63/195 (32%), Positives = 93/195 (47%), Gaps = 20/195 (10%)

Query: 45  FSKNEYSVSALENLPVNYV--LLTVTTNKPRDLRVKYWLSNDYGERFSISRQ-GDISLMQ 101
           F+ NEY+    ENLP +    L+TVT     D         D  + F+I  Q G I    
Sbjct: 570 FTHNEYNFYVPENLPRHGTVGLITVTDPDYGDNSAVTLSILDENDDFTIDSQTGVIRPNI 629

Query: 102 CLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYP----QYELFLPHI 154
             D E ++SY F V A D      ++SA V I+VV+VND  P F  P     YEL LP  
Sbjct: 630 SFDREKQESYTFYVKAEDGGRVSRSSSAKVTINVVDVNDNKPVFIVPPSNCSYELVLP-- 687

Query: 155 PLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-DSGHISIVDLSALNTS 210
                 PG+V+ +V A D D G    +    + G    +F+I+ ++G+I++++   +   
Sbjct: 688 ---STNPGTVVFQVIAVDNDTGMNAEVRYSIVGGNTRDLFAIDQETGNITLMEKCDVTDL 744

Query: 211 TIQLVVV-ATDTGNP 224
            +  V+V A D G P
Sbjct: 745 GLHRVLVKANDLGQP 759



 Score = 57.8 bits (138), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 37/114 (32%), Positives = 61/114 (53%), Gaps = 10/114 (8%)

Query: 76  RVKYWLSNDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNIS 131
           ++ Y L  D    FS+  R G +++++ LD E ED Y FT+ A D     +T++ TV +S
Sbjct: 500 KINYLLGPDAPPEFSLDCRTGMLTVVKKLDREKEDKYLFTILAKDNGVPPLTSNVTVFVS 559

Query: 132 VVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDR--VTLSL 183
           +++ ND  P F + +Y  ++P     +L     +G +   D D GD   VTLS+
Sbjct: 560 IIDQNDNSPVFTHNEYNFYVPE----NLPRHGTVGLITVTDPDYGDNSAVTLSI 609



 Score = 37.7 bits (86), Expect = 8.3,   Method: Compositional matrix adjust.
 Identities = 36/139 (25%), Positives = 67/139 (48%), Gaps = 15/139 (10%)

Query: 103 LDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADL 159
           LD E +D+Y   V   D      +++A + +SV + ND  P F+  + E+ +P     + 
Sbjct: 207 LDREEKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVFKETEIEVSIPE----NA 262

Query: 160 TPGSVIGKVEAADGDKGDRVTLS------LRGPYEKMFSIN-DSGHISIVD-LSALNTST 211
             G+ + ++ A D D G+   +       +     ++F +N  +G I+I + L    T  
Sbjct: 263 PVGTSVTQLHATDADIGENAKIHFSFSNLVSNIARRLFHLNATTGLITIKEPLDREETPN 322

Query: 212 IQLVVVATDTGNPPRQASV 230
            +L+V+A+D G  P +A V
Sbjct: 323 HKLLVLASDGGLMPARAMV 341


>gi|380811824|gb|AFE77787.1| protocadherin-11 X-linked isoform c precursor [Macaca mulatta]
          Length = 1347

 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 75/277 (27%), Positives = 119/277 (42%), Gaps = 59/277 (21%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGERFSI------------- 91
           F+ NEY+    ENLP +  +  +T   P           DYGE  ++             
Sbjct: 570 FTHNEYNFYVPENLPKHGTVGLITVTDP-----------DYGENSAVTLSILDENDGFTI 618

Query: 92  -SRQGDISLMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYP-- 145
            S+ G I      D E ++SY F V A D      ++SA V I+VV+VND  P F  P  
Sbjct: 619 DSKTGVIRPNISFDREKQESYTFYVKAEDGGRVSRSSSAKVTINVVDVNDNKPVFIVPPS 678

Query: 146 --QYELFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEK-MFSIND-SGHI 199
              YEL LP        PG+V+ +V A D D G    V  S+ G   + +F IN+ +G+I
Sbjct: 679 NYSYELVLP-----STDPGTVVFQVIAVDNDTGMNAEVRYSIVGENTRDLFEINETTGNI 733

Query: 200 SIVDLSALNTSTIQLVVV-ATDTGNPPRQASVPAIMHFPEAIVQQAS------------- 245
            + +   +    +  V+V A D G P    SV  +  F    V  A+             
Sbjct: 734 IMKEKCDVTDLGLHRVLVKANDLGQPDSLFSVVTVNLFVNESVTNATLINELLHKSTEAP 793

Query: 246 ----SKLNSGTSSTVLIILGVVLIVLGFVIILLILYI 278
               +++   +S T+  +  +V +V G + +++++ I
Sbjct: 794 VTPNTEIADASSPTIDYVKILVAVVAGTITVVVVISI 830



 Score = 55.5 bits (132), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 36/114 (31%), Positives = 61/114 (53%), Gaps = 10/114 (8%)

Query: 76  RVKYWLSNDYGERFSISRQ-GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNIS 131
            + + L  D    FS+ R+ G +++++ LD E E+ Y FTV A D     +T++ TV +S
Sbjct: 500 EINFLLGPDAPPEFSLDRRTGMLTVLKKLDREKEEKYFFTVLAKDNGVPPLTSNVTVFVS 559

Query: 132 VVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDR--VTLSL 183
           V++ ND  P F + +Y  ++P     +L     +G +   D D G+   VTLS+
Sbjct: 560 VIDQNDNSPAFTHNEYNFYVPE----NLPKHGTVGLITVTDPDYGENSAVTLSI 609



 Score = 39.3 bits (90), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 38/139 (27%), Positives = 69/139 (49%), Gaps = 15/139 (10%)

Query: 103 LDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADL 159
           LD E +D+Y   V   D      +++A + +SV + ND  P F+  + E+ +P     + 
Sbjct: 207 LDREEKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVFKETEIEVSIPE----NA 262

Query: 160 TPGSVIGKVEAADGDKGD--RVTLSLRGPY----EKMFSIND-SGHISIVD-LSALNTST 211
             G+ + ++ A D D G+  R+  S         +++F +N  +G I+I + L    T  
Sbjct: 263 PVGTSVTQLHATDADIGENARIHFSFSNLVSNIAKRLFHLNSTTGLITIKEPLDREETPN 322

Query: 212 IQLVVVATDTGNPPRQASV 230
            +L+V+A+D G  P +A V
Sbjct: 323 HKLLVLASDGGLVPARAMV 341


>gi|345328662|ref|XP_003431292.1| PREDICTED: protocadherin gamma-B6-like [Ornithorhynchus anatinus]
          Length = 838

 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 67/290 (23%), Positives = 123/290 (42%), Gaps = 28/290 (9%)

Query: 95  GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQY---- 147
           GDI   +  DYE   ++   V A D+    +  + TV + +V+ ND  PR  YP      
Sbjct: 449 GDIYAQRSFDYEQFRAFELHVQAQDSGSPPLRANVTVRMFIVDQNDNAPRILYPALGPDG 508

Query: 148 ELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-DSGHISIVD 203
                 +P +   PG ++ KV A D D G    L+   L+     +FS+   +G I    
Sbjct: 509 SALFDMVPRS-AEPGYLVSKVVAVDADSGPNAWLAYHVLQASDPGLFSLGLRTGEIRTAR 567

Query: 204 -LSALNTSTIQLVVVATDTGNPPRQASVPAIMHFPEAI---VQQASSKLNSGTSSTVL-- 257
            L+  + S  +L+V   D G PP  ++V   + F +++   + + S + + G S T L  
Sbjct: 568 ALADGDPSRHRLLVAVRDGGQPPLSSTVALHLVFADSLQDALPELSDRSSPGPSQTDLQF 627

Query: 258 -IILGVVLIVLGFVIILLILYIHKNKHTKNNGPPGSSHSKNDSFLSNVILPEKHVNVVAI 316
            ++L + LI + F++ +++  + +  H+     PG       +  S    P      +  
Sbjct: 628 YLVLALALISVLFLVTVILAIVMRCHHSSK---PGFFSCLQPALYSQAAGP------IFP 678

Query: 317 PKIQENPVFNGSQEELQTQRGGTNSSIYTATVKKTLSGKPELDPEVGVTP 366
           P  +E  +    Q    ++RG    +  +   +K+L G+   D    + P
Sbjct: 679 PNYEEGTLPYSYQLCFTSERGKGEFTFLSPNCQKSLDGEIRSDYHSALMP 728


>gi|260828414|ref|XP_002609158.1| hypothetical protein BRAFLDRAFT_131370 [Branchiostoma floridae]
 gi|229294513|gb|EEN65168.1| hypothetical protein BRAFLDRAFT_131370 [Branchiostoma floridae]
          Length = 2847

 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 45/136 (33%), Positives = 72/136 (52%), Gaps = 8/136 (5%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSN-DYGERFSIS-RQGDISLMQC 102
            F K  Y+VS  EN+ ++  ++ +    P  L++ Y +++ D   +F+I    G I+++  
Sbjct: 918  FEKPFYAVSIPENIQLHTPVINIKAASPDGLKLIYSITDGDPFNQFNIDFDTGVINVVGS 977

Query: 103  LDYETEDSYRFTVYATDTLMTTSA--TVNISVVNVNDWDPRFRYPQYELFLPHIPLADLT 160
            LDYET+ ++R TV ATD+     A   V+I+V ++ND  P F  P YE  L         
Sbjct: 978  LDYETKQNFRLTVRATDSRSGVDAEVVVDITVQDINDVAPVFEKPSYEATLSEAAAI--- 1034

Query: 161  PGSVIGKVEAADGDKG 176
             G+ + KV A D D G
Sbjct: 1035 -GTTVIKVSATDLDSG 1049



 Score = 55.8 bits (133), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 57/194 (29%), Positives = 90/194 (46%), Gaps = 18/194 (9%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTTNKPR---DLRVKYWLSNDYGERFSISRQ-GDISL 99
            +F K +Y V   EN  VN +L  V    P    + +V Y   +    +F +    G +SL
Sbjct: 1862 KFEKQQYLVPVYENTAVNTLLTRVQATDPDMGLNRKVMYSFVDSANGQFQVDENSGIVSL 1921

Query: 100  MQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
             + LD E + S+  T+ ATD      ++++ + ISV+++ND  P F + +Y        +
Sbjct: 1922 AKALDREAQASFNLTIRATDEGAPRRSSTSYLIISVLDINDNPPEFEFAEYAK-----NV 1976

Query: 157  ADLTP-GSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIND-SGHISIVD-LSALNTS 210
            ++ TP GS I  V A   D G    ++   + G     F I   SG I+IV+ L    + 
Sbjct: 1977 SESTPIGSQIINVYAVSKDVGPNAEITYEIISGNEHGKFEIGSYSGKITIVNTLDYEASQ 2036

Query: 211  TIQLVVVATDTGNP 224
               L V A+D G P
Sbjct: 2037 GYYLTVKASDGGMP 2050



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 50/142 (35%), Positives = 71/142 (50%), Gaps = 16/142 (11%)

Query: 95   GDISLMQCLDYETEDSYRFTVYATDTLMTTSA---TVNISVVNVNDWDPRFRYPQYELFL 151
            G I+++  LDYE    Y  TV A+D  M T +   TV+I+V +VND  P F  P Y   +
Sbjct: 2110 GKITIVNTLDYEASQGYYLTVKASDGGMPTLSDITTVSINVTDVNDNAPEFSMPMYSASI 2169

Query: 152  PHIPLADLTPGSVIGKVEAADGDK--GDRVTLSL-RGPYEKMFSINDSGHISIVDLS-AL 207
                  D   G  + +V A D D     +VT ++ RG  +  F+I  +  + IV +S AL
Sbjct: 2170 SE----DAHTGDSVIQVMATDRDSPPNAQVTYTIVRGDSKGQFNI--APKLGIVTVSGAL 2223

Query: 208  NTSTIQ---LVVVATDTGNPPR 226
            +   IQ   L V A D+G  PR
Sbjct: 2224 DREEIQAYSLTVRAKDSGASPR 2245



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 64/267 (23%), Positives = 110/267 (41%), Gaps = 25/267 (9%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGERFSISRQGDISLMQCL 103
           +F   EY++   EN  +  +++ +       +  +    N  G        G I+  + L
Sbjct: 125 KFDAKEYAIEVSENARLGSLIVMLGATSRSSVTYEIIGGNTDGSFDVNPNSGVITCKKQL 184

Query: 104 DYETEDSYRFTVYATDTL-MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPG 162
           DYE + SY  TV AT+ + ++++ATV + + + ND  P F   +Y        +  ++  
Sbjct: 185 DYERQTSYNLTVQATNMVSLSSTATVLVHIADENDNPPVFSQSEY--------IGSISEA 236

Query: 163 SVIGKV-----------EAADGDKGDRVTLS---LRGPYEKMFSIN-DSGHI-SIVDLSA 206
           + IG V            A D D      L    +    +K FSI+ ++G + +I  L  
Sbjct: 237 ATIGSVVLDVNNIPLVIAATDADNELNSLLVYEIIESAAQKYFSIDSNTGALRTIRTLDH 296

Query: 207 LNTSTIQLVVVATDTGNPPRQASVPAIMHFPEAIVQQASSKLNSGTSSTVLIILGVVLIV 266
            + +  +  V  +DTGNPP +A  PA +      V  +    N G   ++   LG++ + 
Sbjct: 297 EDIAEFRFTVQVSDTGNPPLKAENPANVTIKVLDVNDSPPTWNVGNVFSIDETLGIITVS 356

Query: 267 LGFVIILLILYIHKNKHTKNNGPPGSS 293
                  L  Y    K   N  PP SS
Sbjct: 357 KQLDRSALSQYHLTVKVRDNGNPPLSS 383



 Score = 51.2 bits (121), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 43/144 (29%), Positives = 71/144 (49%), Gaps = 10/144 (6%)

Query: 13   LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLL---TVTT 69
            L +RA       R + + LI+S    +    +F   EY+ +  E+ P+   ++    V+ 
Sbjct: 1935 LTIRATDEGAPRRSSTSYLIISVLDINDNPPEFEFAEYAKNVSESTPIGSQIINVYAVSK 1994

Query: 70   NKPRDLRVKYWL--SNDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDTLMTTSA 126
            +   +  + Y +   N++G +F I S  G I+++  LDYE    Y  TV A+D  M T +
Sbjct: 1995 DVGPNAEITYEIISGNEHG-KFEIGSYSGKITIVNTLDYEASQGYYLTVKASDGGMPTLS 2053

Query: 127  ---TVNISVVNVNDWDPRFRYPQY 147
               TV+I+V +VND  P F  P Y
Sbjct: 2054 DITTVSINVTDVNDNAPEFSMPMY 2077



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 46/151 (30%), Positives = 70/151 (46%), Gaps = 17/151 (11%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVK-------YWLSNDYGERFSISRQ-GD 96
            F  + Y     E+     +++TV+T   RD  +        Y    D   +F+I R+ G 
Sbjct: 1659 FRSSTYQGQVREDALPGTIVITVST---RDADIGDNTIPTYYITGGDPQGQFNIERKTGK 1715

Query: 97   ISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
            + +   LD ET+  Y   + ATD   T  ATVNI V +VND  P     +Y   +     
Sbjct: 1716 VYVNGPLDRETKQLYVLNITATDGAFTAMATVNIDVQDVNDNSPICEQSRYTASISE--- 1772

Query: 157  ADLTPGSVIGKVEAADGDKG--DRVTLSLRG 185
             D+TP + + +V A D D+G   ++T SL G
Sbjct: 1773 -DITPQTFVMEVLARDPDQGIHSQITYSLDG 1802



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 51/206 (24%), Positives = 90/206 (43%), Gaps = 25/206 (12%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGERFSISRQGDISLMQCL 103
           +F   EY++   EN  +  +++ +       +  +    N  G        G I+  + L
Sbjct: 400 KFDAKEYAIEVSENARLGSLIVMLGATSRSSVTYEIIGGNTDGSFDVNPNSGVITCKKQL 459

Query: 104 DYETEDSYRFTVYATDTL-MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPG 162
           DYE + SY  TV AT+ + ++++ATV + + + ND  P F   +Y        +  ++  
Sbjct: 460 DYERQTSYNLTVQATNMVSLSSTATVLVHIADENDNPPVFSQSEY--------IGSISEA 511

Query: 163 SVIGKV-----------EAADGDKGDRVTLS---LRGPYEKMFSIN-DSGHI-SIVDLSA 206
           + IG V            A D D      L    +    +K FSI+ ++G + +I  L  
Sbjct: 512 ATIGSVVLDVNNIPLVIAATDADNELNSLLVYEIIESAAQKYFSIDSNTGALRTIRTLDH 571

Query: 207 LNTSTIQLVVVATDTGNPPRQASVPA 232
            + +  +  V  +DTGNPP +A  PA
Sbjct: 572 EDIAEFRFTVQVSDTGNPPLKAENPA 597



 Score = 48.1 bits (113), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 62/200 (31%), Positives = 87/200 (43%), Gaps = 25/200 (12%)

Query: 29  ATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTT-----------NKPRDLRV 77
           AT++V  A  +     FS++EY  S  E   +  V+L V             N+   L V
Sbjct: 483 ATVLVHIADENDNPPVFSQSEYIGSISEAATIGSVVLDVNNIPLVIAATDADNELNSLLV 542

Query: 78  KYWLSNDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDT-----LMTTSATVNIS 131
              + +   + FSI S  G +  ++ LD+E    +RFTV  +DT          A V I 
Sbjct: 543 YEIIESAAQKYFSIDSNTGALRTIRTLDHEDIAEFRFTVQVSDTGNPPLKAENPANVTIK 602

Query: 132 VVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSL---RGPYE 188
           V++VND  P      YE  L      D+     I  VEA D D      LS     G  +
Sbjct: 603 VLDVNDSPPTCTQDIYEATLLLPTYKDV----AIVTVEAEDADTEANTQLSYVLTMGNED 658

Query: 189 KMFSIN-DSGHISIVDLSAL 207
           K FSIN D+G I+IV+ + L
Sbjct: 659 KKFSINKDTGVITIVNTTGL 678



 Score = 44.3 bits (103), Expect = 0.096,   Method: Compositional matrix adjust.
 Identities = 57/205 (27%), Positives = 92/205 (44%), Gaps = 22/205 (10%)

Query: 45   FSKNEYSVSALENLPVN-YVLLTVTTNKPRDL--RVKYWLSND-YGERFSI-SRQGDISL 99
            FS+  Y+VS  EN P   YV++   T++       + Y ++++   + F I +  G I  
Sbjct: 1228 FSQLNYAVSFDENNPRGTYVVMVTATDEDAGAYGEISYSIASEKINQLFEIDADTGQIYS 1287

Query: 100  MQCLDYETEDSYRFTV--YATDTLMTTS-ATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
               LD E E+     V   A+D     S   V +++ + ND  P+F    Y+  +P    
Sbjct: 1288 KMALDREDENQRMIIVPVVASDQGGRVSFCNVTVTLTDKNDNTPQFELASYQANIP---- 1343

Query: 157  ADLTPGSVIGKVEAADGDKGDR--VTLSLRGPYE------KMFSIN-DSGHISIVD-LSA 206
             D   G+ + +V A D D G    +  SL    +      K+FS++ ++G I+    L+ 
Sbjct: 1344 TDAEEGAEVIQVNAIDQDIGTNSDIAYSLYDDSDTTAAVVKLFSVHSETGMITTRQKLTG 1403

Query: 207  LNTSTIQLVVVATDTGNPPRQASVP 231
                  Q  V ATD GNP R +S P
Sbjct: 1404 KEGKAFQFFVQATDGGNPTRTSSAP 1428



 Score = 42.4 bits (98), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 40/147 (27%), Positives = 65/147 (44%), Gaps = 17/147 (11%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTTNKP---RDLRVKYWLSND-----YGERFSI-SRQ 94
            +F    Y ++  EN  V   ++ V    P    +  + Y  ++D       + F+I S  
Sbjct: 1548 KFDSKPYKITLPENASVGTSVIQVHAFDPDQGANGEIVYGFASDSNADEMSDFFTIDSES 1607

Query: 95   GDISLMQCLDYETEDSYRFTVYATDT----LMTTSATVNISVVNVNDWDPRFRYPQYELF 150
            G ++ +  LD E   SY F V ATD      +  +  V+++V +VND  P FR   Y+  
Sbjct: 1608 GWVTTLVPLDREMMSSYAFGVTATDKGEPKQLKDTTLVHVTVADVNDSPPTFRSSTYQGQ 1667

Query: 151  LPHIPLADLTPGSVIGKVEAADGDKGD 177
            +      D  PG+++  V   D D GD
Sbjct: 1668 VRE----DALPGTIVITVSTRDADIGD 1690



 Score = 39.7 bits (91), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 32/110 (29%), Positives = 59/110 (53%), Gaps = 13/110 (11%)

Query: 103  LDYETEDSYRFTVYATDTLM---TTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADL 159
            LD+E  + + FTV  +D  M   ++   V ++V+++ND  P+F  P Y+       +++L
Sbjct: 1084 LDHEKIEKHDFTVRVSDGGMPSLSSEVHVIVTVLDLNDNAPQFDQPSYDCM-----ISEL 1138

Query: 160  TP-GSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSIND--SGHISIVDL 204
             P G  + KV A+D D  D  R+  ++    E+M  + D  +G +S+ +L
Sbjct: 1139 APRGHFVTKVSASDADSTDNNRLVYAIVSGNEQMNFVIDPKTGIVSMSNL 1188



 Score = 39.7 bits (91), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 39/137 (28%), Positives = 58/137 (42%), Gaps = 14/137 (10%)

Query: 103 LDYETEDSYRFTVYATDTLMT---TSATVNISVVNVNDWDPRF-RYPQYELFLPHIPLAD 158
            D E ++ Y   +   D   T       V +++ ++ND  P F   P Y +        D
Sbjct: 773 FDREEKEKYEIVIEVRDKRSTPRVAHVVVFVTIADINDNAPVFVNLPYYSVVQ-----VD 827

Query: 159 LTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIN-DSGHISIVD-LSALNTST-IQ 213
             PG+ +  V A D D G    +  SL     K F IN  +G I +   L   +T+    
Sbjct: 828 AEPGTPVRTVTAVDKDAGKNSEIRYSLDSGAHKRFRINRKTGQIMVKQPLEKDDTNKEYH 887

Query: 214 LVVVATDTGNPPRQASV 230
           LV++A D GNPP  A +
Sbjct: 888 LVIIAEDKGNPPLSARI 904


>gi|119623183|gb|EAX02778.1| hCG1797565, isoform CRA_b [Homo sapiens]
          Length = 1125

 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 76/274 (27%), Positives = 119/274 (43%), Gaps = 40/274 (14%)

Query: 45  FSKNEYSVSALENLPVNYV--LLTVTTNKPRDLRVKYWLSNDYGERFSISRQ-GDISLMQ 101
           F+ NEY     ENLP +    L+TVT     D         D  + F+I  Q G I    
Sbjct: 570 FTHNEYKFYVPENLPRHGTVGLITVTDPDYGDNSAVTLSILDENDDFTIDSQTGVIRPNI 629

Query: 102 CLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYP----QYELFLPHI 154
             D E ++SY F V A D      ++SA V I+VV+VND  P F  P     YEL LP  
Sbjct: 630 SFDREKQESYTFYVKAEDGGRVSRSSSAKVTINVVDVNDNKPVFIVPPSNCSYELVLPST 689

Query: 155 PLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-DSGHISIVDLSALNTS 210
                 PG+V+ +V A D D G    +    + G    +F+I+ ++G+I++++   +   
Sbjct: 690 -----NPGTVVFQVIAVDNDTGMNAEVRYSIVGGNTRDLFAIDQETGNITLMEKCDVTDL 744

Query: 211 TIQLVVV-ATDTGNPPRQASVPAIMHFPEAIVQQAS--------------------SKLN 249
            +  V+V A D G P    SV  +  F    V  A+                    + ++
Sbjct: 745 GLHRVLVKANDLGQPDSLFSVVIVNLFVNESVTNATLINELVRKSTEAPVTPNTEIADVS 804

Query: 250 SGTSSTVLIILGVVLIVLGFVIILLILYIHKNKH 283
           S TS  V I++  V   +  V+++ I  + + + 
Sbjct: 805 SPTSDYVKILVAAVAGTITVVVVIFITAVVRCRQ 838



 Score = 58.2 bits (139), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 37/114 (32%), Positives = 62/114 (54%), Gaps = 10/114 (8%)

Query: 76  RVKYWLSNDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNIS 131
           ++ Y L  D    FS+  R G +++++ LD E ED Y FT+ A D     +T++ TV +S
Sbjct: 500 KINYLLGPDAPPEFSLDCRTGMLTVVKKLDREKEDKYLFTILAKDNGVPPLTSNVTVFVS 559

Query: 132 VVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDR--VTLSL 183
           +++ ND  P F + +Y+ ++P     +L     +G +   D D GD   VTLS+
Sbjct: 560 IIDQNDNSPVFTHNEYKFYVPE----NLPRHGTVGLITVTDPDYGDNSAVTLSI 609



 Score = 38.1 bits (87), Expect = 7.8,   Method: Compositional matrix adjust.
 Identities = 36/139 (25%), Positives = 67/139 (48%), Gaps = 15/139 (10%)

Query: 103 LDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADL 159
           LD E +D+Y   V   D      +++A + +SV + ND  P F+  + E+ +P     + 
Sbjct: 207 LDREEKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVFKETEIEVSIPE----NA 262

Query: 160 TPGSVIGKVEAADGDKGDRVTLS------LRGPYEKMFSIN-DSGHISIVD-LSALNTST 211
             G+ + ++ A D D G+   +       +     ++F +N  +G I+I + L    T  
Sbjct: 263 PVGTSVTQLHATDADIGENAKIHFSFSNLVSNIARRLFHLNATTGLITIKEPLDREETPN 322

Query: 212 IQLVVVATDTGNPPRQASV 230
            +L+V+A+D G  P +A V
Sbjct: 323 HKLLVLASDGGLMPARAMV 341


>gi|41223270|emb|CAD92434.1| protocadherin [Homo sapiens]
          Length = 787

 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 76/266 (28%), Positives = 116/266 (43%), Gaps = 40/266 (15%)

Query: 45  FSKNEYSVSALENLPVNYV--LLTVTTNKPRDLRVKYWLSNDYGERFSISRQ-GDISLMQ 101
           F+ NEY     ENLP +    L+TVT     D         D  + F+I  Q G I    
Sbjct: 390 FTHNEYKFYVPENLPRHGTVGLITVTDPDYGDNSAVTLSILDENDDFTIDSQTGVIRPNI 449

Query: 102 CLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYP----QYELFLPHI 154
             D E ++SY F V A D      ++SA V I+VV+VND  P F  P     YEL LP  
Sbjct: 450 SFDREKQESYTFYVKAEDGGRVSRSSSAKVTINVVDVNDNKPVFIVPPYNYSYELVLPST 509

Query: 155 PLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-DSGHISIVDLSALNTS 210
                 PG+V+ +V A D D G    +    + G    +F+I+ ++G+I++++   +   
Sbjct: 510 -----NPGTVVFQVIAVDNDTGMNAEVRYSIVGGNTRDLFAIDQETGNITLMEKCDVTDL 564

Query: 211 TIQLVVV-ATDTGNPPRQASVPAIMHFPEAIVQQAS--------------------SKLN 249
            +  V+V A D G P    SV  +  F    V  A+                    + ++
Sbjct: 565 GLHRVLVKANDLGQPDSLFSVVIVNLFVNESVTNATLINELVRKSIEAPVTPNTEIADVS 624

Query: 250 SGTSSTVLIILGVVLIVLGFVIILLI 275
           S TS  V I++  V   +  V+++ I
Sbjct: 625 SPTSDYVKILVAAVAGTITVVVVIFI 650



 Score = 58.2 bits (139), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 37/114 (32%), Positives = 62/114 (54%), Gaps = 10/114 (8%)

Query: 76  RVKYWLSNDYGERFSISRQ-GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNIS 131
            + Y L  D    FS+ R+ G +++++ LD E ED Y FT+ A D     +T++ TV +S
Sbjct: 320 EINYLLGPDAPPEFSLDRRTGMLTVVKKLDREKEDKYLFTILAKDNGVPPLTSNVTVFVS 379

Query: 132 VVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDR--VTLSL 183
           +++ ND  P F + +Y+ ++P     +L     +G +   D D GD   VTLS+
Sbjct: 380 IIDQNDNSPVFTHNEYKFYVPE----NLPRHGTVGLITVTDPDYGDNSAVTLSI 429



 Score = 37.7 bits (86), Expect = 9.3,   Method: Compositional matrix adjust.
 Identities = 36/139 (25%), Positives = 67/139 (48%), Gaps = 15/139 (10%)

Query: 103 LDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADL 159
           LD E +D+Y   V   D      +++A + +SV + ND  P F+  + E+ +P     + 
Sbjct: 27  LDREEKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVFKETEIEVSIPE----NA 82

Query: 160 TPGSVIGKVEAADGDKGDRVTLS------LRGPYEKMFSIN-DSGHISIVD-LSALNTST 211
             G+ + ++ A D D G+   +       +     ++F +N  +G I+I + L    T  
Sbjct: 83  PVGTSVTQLHATDADIGENAKIHFSFSNLVSNIARRLFHLNATTGLITIKEPLDREETPN 142

Query: 212 IQLVVVATDTGNPPRQASV 230
            +L+V+A+D G  P +A V
Sbjct: 143 HKLLVLASDGGLMPARAMV 161


>gi|16758872|ref|NP_446429.1| cadherin-17 precursor [Rattus norvegicus]
 gi|1705555|sp|P55281.1|CAD17_RAT RecName: Full=Cadherin-17; AltName: Full=Liver-intestine cadherin;
           Short=LI-cadherin; Flags: Precursor
 gi|505563|emb|CAA55631.1| cadherin [Rattus norvegicus]
 gi|149045443|gb|EDL98443.1| cadherin 17 [Rattus norvegicus]
          Length = 827

 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 75/292 (25%), Positives = 131/292 (44%), Gaps = 39/292 (13%)

Query: 14  VVRAIQYDNQDRYALATLIVSKAGTSLRELQ-FSKNEYSVSALENLPVNYVLLTVTTNKP 72
           +V  I+Y N   +A   L V    T + E+  F +  +  +  E+  +   + TVT   P
Sbjct: 538 LVNGIEY-NASSFASFELTV----TDVNEVPVFPQQIFQANVSEDTAIGTKVGTVTARDP 592

Query: 73  RDLRVKYWLSNDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATD---TLMTTSATV 128
             L V Y L ++      I S  GDI     LD ETE  YR  V AT+   + ++++A  
Sbjct: 593 EGLTVSYSLKDNKRGWLKIDSVTGDIFSTAPLDRETESVYRVQVVATEVGGSSLSSTAYF 652

Query: 129 NISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYE 188
           ++ +++VND  PR       LF  H PL+   PGS+I   EA D D+      S+R P +
Sbjct: 653 HLVLMDVNDNPPRLAKDYTGLFFCH-PLS--APGSLI--FEATDDDQQ-----SVRRP-K 701

Query: 189 KMFSINDSGHISIVDLSALNTSTIQLV--------------VVATDTGNPPRQASVPAIM 234
             F++      S  ++S +N +  +L               ++  D G PP +  V   +
Sbjct: 702 FTFALGRESLQSDWEVSKINGTHARLSTKHTRFEEQVYDIPILINDGGQPPMEGIVSLSV 761

Query: 235 HFPEAI----VQQASSKLNSGTSSTVLIILGVVLIVLGFVIILLILYIHKNK 282
            F + +     + A +++   T    + IL    +V+G ++ ++ + + K+K
Sbjct: 762 TFCQCVDGSCFRPAGNQVGIPTVGMAVGILLTTFLVIGIILAVVFIRMRKDK 813


>gi|297674526|ref|XP_002815275.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin-23-like [Pongo abelii]
          Length = 2916

 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 76/301 (25%), Positives = 131/301 (43%), Gaps = 33/301 (10%)

Query: 11   ITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVN--------- 61
             TL V+A   + +  ++ A + VS    +    QF  + +S     NLP++         
Sbjct: 2281 FTLTVQASDAEKK-HFSFAVVFVSVLDDNDHAPQFMFSSFSCIVPXNLPISSTICSINAL 2339

Query: 62   ------YVLLTVTTNKPRDLRVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTV 115
                  Y  LT +   P    + + +S D+         GDI   Q LDYE  + Y  TV
Sbjct: 2340 DFDAGPYGELTYSIVSP--CFLTHGMSYDHDLFLIDPLTGDIHAKQILDYENGNKYCLTV 2397

Query: 116  YATDTL-MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGD 174
             A D    T S  V + +  +++++P F   QY   LP           +IG+VEA+D D
Sbjct: 2398 QAKDKGDATASLVVWVDIEGIDEFEPIFTQDQYFFTLPE----KNKDRQLIGRVEASDAD 2453

Query: 175  KG-DRVTLSLRGPYEKMFSINDS-GHISIVDL-----SALNTS-TIQLVVVATDTGNPPR 226
             G D V L   G     FS+N + G+I ++       S LN   T+++ ++A    +  +
Sbjct: 2454 AGIDGVILYSLGTSSPFFSVNKTNGNIYLIRALPLIKSQLNKEDTMEMKIIAHSPKSDSK 2513

Query: 227  QASVPAIMHFPEAIVQQASSKLNSGTSSTVLIILGVVLIVLGFVIILLILYIHKNKHTKN 286
             +S    ++   +      +   S  S ++++   V LI++  +I++++   HK K T N
Sbjct: 2514 FSSCTVFVNVSFSYEGTPLAVFASSFSISLVVSFLVFLILICILIVMILR--HKQKDTIN 2571

Query: 287  N 287
            N
Sbjct: 2572 N 2572



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 55/201 (27%), Positives = 91/201 (45%), Gaps = 14/201 (6%)

Query: 38  TSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLR--VKYWLSN-DYGERFSISRQ 94
           T+L   +F + +Y+    E++P +  + TV   +P +    + Y +S+ D G  FSI   
Sbjct: 370 TTLAPAEFERPKYTFLVYEDVPEDSPIGTVKAREPLNSSEPIFYRISSGDLGGMFSIHPW 429

Query: 95  -GDISLMQCLDYETEDSYRFTVYAT--DTLMTTSATVNISVVNVNDWDPRFRYPQYELFL 151
            G I   + LD+ET+     TV A        +S  VNI+VV+VND  P F     E+ +
Sbjct: 430 LGTIRTRKPLDHETQPVVVLTVQAQLGSAPACSSTEVNITVVDVNDNHPAFLRTSDEIRI 489

Query: 152 PHIPLADLTPGSVIGKVEAADGDKGDR--VTLSLRGPYEKMFSINDSGHISIVD--LSAL 207
                    PG+ +    A D D G    +  S+  P   +F+I+ +  +  ++  L   
Sbjct: 490 SQT----TAPGTALYLARAEDRDSGRNGLIRYSIASPQPGVFAIDRALGVLFLNGSLGVS 545

Query: 208 NTSTIQLVVVATDTGNPPRQA 228
               + L + A D G PP+ A
Sbjct: 546 KHRELALTLRAEDQGVPPQAA 566



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 58/209 (27%), Positives = 94/209 (44%), Gaps = 30/209 (14%)

Query: 56   ENLPVNYVLLTVTTNKP---RDLRVKY-WLSNDYGERFSISRQGDISLMQC-LDYETEDS 110
            E++ V  ++  +T + P   R+ +V Y  LS +    F +     +    C LDYE +  
Sbjct: 1175 EDVTVGSLVHHITAHDPDEGRNGKVTYSILSGNENMAFMLDESSGLLTTTCPLDYEMKTQ 1234

Query: 111  YRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGK 167
            +  TV A D     +++S T+ I+V++VND  P F+   YE  +      +  PG  + +
Sbjct: 1235 HILTVLALDDGTPALSSSQTLTITVLDVNDEAPVFKQHLYEASVKE----NQKPGEFVTR 1290

Query: 168  VEAADGDKGDRVTLSLR---GPYEKMFSIN-DSGHI---SIVDLSALNTSTIQLVVVATD 220
            VEA D D G    L      G   + F IN D+G +   +I+D       T++++V    
Sbjct: 1291 VEALDRDSGVNSKLQFEIMPGASFESFEINSDTGEVVTTTILDREIQEVFTLRVLV---R 1347

Query: 221  TGNPPRQASVPAIM--------HFPEAIV 241
             G  P  +S   I+        H PE IV
Sbjct: 1348 DGGFPSLSSTTTILCTVEDENDHAPEFIV 1376



 Score = 46.6 bits (109), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 43/148 (29%), Positives = 78/148 (52%), Gaps = 11/148 (7%)

Query: 86   GERFSISRQ-GDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRY 144
            G +F+I +  G + L++ LD+E    Y+  +  +D++  T   + + V++VND  P F  
Sbjct: 1935 GTKFAIDQNTGVVVLVKTLDFEEMSEYKLLIQISDSVHHTEGALVVRVLDVNDNPPVFSQ 1994

Query: 145  PQYELFLPH-IPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSIN-DSGHI-SI 201
              Y++ +P  IP+     G  +  + A D +  + ++  +     K FSI+  +G I +I
Sbjct: 1995 DFYQVTVPESIPV-----GYSVLTLSATDLESNENISYRILSS-SKEFSIDPKNGTIFTI 2048

Query: 202  VDLSALNT-STIQLVVVATDTGNPPRQA 228
              +  L+T ST Q +V A+D GNP  +A
Sbjct: 2049 SPVLLLDTISTTQFLVEASDGGNPDLRA 2076



 Score = 43.1 bits (100), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 41/148 (27%), Positives = 67/148 (45%), Gaps = 19/148 (12%)

Query: 56   ENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTV 115
            EN  V Y +  ++ N   D  V+   +N +   +   + G + L+  LD E   S+   +
Sbjct: 2126 ENTYVEYSI--ISGNSQNDFHVE---TNFFHSEYPHKQVGYLVLLHSLDREASASHELVI 2180

Query: 116  YATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTP-GSVIGKVEAA 171
             A+D+    ++++A ++I VV+VND  P F    Y     H  + + TP GS I  V A 
Sbjct: 2181 LASDSGRPPLSSTAVISIQVVDVNDNPPNFSSLSY-----HTHVKESTPLGSHITVVSAN 2235

Query: 172  DGDKGDRVTLSLRGPYEKMFSINDSGHI 199
            D D G    +        + S N+ GH 
Sbjct: 2236 DRDTGSHAEIIY-----NIISGNEKGHF 2258



 Score = 42.4 bits (98), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 51/197 (25%), Positives = 86/197 (43%), Gaps = 14/197 (7%)

Query: 50   YSVSALENLPVNYVLLTVTT-NKPRDL--RVKYWLSNDYGERFSIS-RQGDISLMQCLDY 105
            Y  S  E+  V  V+L ++  +K   L  + +Y+L+++    F+I    G +     LD 
Sbjct: 1483 YQSSVREDAEVGTVVLVLSAVDKDEGLNGQTEYFLTDEASGAFTIDPMSGTLKTSSALDR 1542

Query: 106  ETEDSYRFTVYATDTLM----TTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTP 161
            E    + F+  A D  +    +T+  + + V +VND DP      +++FL   P +    
Sbjct: 1543 EARSQHTFSAVARDCSIQGSRSTTVIIKVYVTDVNDNDPVLEQNPFDVFLS--PQSRTNQ 1600

Query: 162  GSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSIND-SGHISIVDLSALNTSTIQLVVVAT 219
             +VI  V A D D G   T+       + MFSI+  +G I      +     I L +  T
Sbjct: 1601 TTVI--VRADDLDLGPNGTVVFSFAETQSMFSIDKYTGEIQFQQNPSSEYFPIWLQLKVT 1658

Query: 220  DTGNPPRQASVPAIMHF 236
            D G P R  +   ++H 
Sbjct: 1659 DQGIPARTTTGLLVIHM 1675



 Score = 40.0 bits (92), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 41/153 (26%), Positives = 72/153 (47%), Gaps = 14/153 (9%)

Query: 87   ERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRF 142
            E F I S  G++     LD E ++ +   V   D     ++++ T+  +V + ND  P F
Sbjct: 1315 ESFEINSDTGEVVTTTILDREIQEVFTLRVLVRDGGFPSLSSTTTILCTVEDENDHAPEF 1374

Query: 143  RYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIND-SGH 198
                Y++ +    L +  P  V+  V A+D D G+   +    + G  ++ F+IN+ SG 
Sbjct: 1375 IVSSYDIEV----LENQEP-EVVYTVLASDMDAGNNRAVEYHIIDGNTDEYFAINEMSGE 1429

Query: 199  ISIVD-LSALNTSTIQLVVVATDTGNPPRQASV 230
            +S    L     S   L V+ +D G+PPR + +
Sbjct: 1430 LSTTRALDREQVSNFTLAVLCSDLGDPPRSSVI 1462



 Score = 39.3 bits (90), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 30/86 (34%), Positives = 40/86 (46%), Gaps = 8/86 (9%)

Query: 95  GDISLMQCLDYETEDSYRFTVYA----TDTLMTTSATVNISVVNVNDWDPRFRYPQYELF 150
           G I L +  DYE+  +Y F V+A       L   S TV + V + ND  P F +    L 
Sbjct: 641 GWIYLRRQFDYESTQTYNFRVFAWIPEDGLLQNVSTTVIVRVRDENDNSPTFLHDVLFLK 700

Query: 151 LPHIPLADLTPGSVIGKVEAADGDKG 176
           +   P+    P  VIGK+ A D D G
Sbjct: 701 VEESPV----PQGVIGKITAIDMDSG 722



 Score = 39.3 bits (90), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 38/140 (27%), Positives = 61/140 (43%), Gaps = 13/140 (9%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRD----LRVKYWL--SNDYGERFSISRQGDIS 98
            FS   Y     E+ P+   +  V+ N  RD      + Y +   N+ G  +     G + 
Sbjct: 2210 FSSLSYHTHVKESTPLGSHITVVSAND-RDTGSHAEIIYNIISGNEKGHFYLEENTGVLY 2268

Query: 99   LMQCLDYETEDSYRFTVYATDTLMT--TSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
            L++ LDYE    +  TV A+D      + A V +SV++ ND  P+F +  +   +P    
Sbjct: 2269 LIKPLDYEEMTKFTLTVQASDAEKKHFSFAVVFVSVLDDNDHAPQFMFSSFSCIVP---- 2324

Query: 157  ADLTPGSVIGKVEAADGDKG 176
             +L   S I  + A D D G
Sbjct: 2325 XNLPISSTICSINALDFDAG 2344



 Score = 38.1 bits (87), Expect = 8.2,   Method: Compositional matrix adjust.
 Identities = 32/93 (34%), Positives = 45/93 (48%), Gaps = 8/93 (8%)

Query: 49  EYSVSALENLPVNYVLLTVTTNKP---RDLRVKYWLSN-DYGERFSI-SRQGDISLMQCL 103
           E  +  LE  PVN ++ TV    P    +  V Y +S+ D  + F I +  G+I     L
Sbjct: 847 ELHLKVLEGQPVNMLVTTVFAKDPDEGNNAEVIYSVSSEDSSDHFKIDANSGEIRTTTIL 906

Query: 104 DYETEDSYRFTVYATDT---LMTTSATVNISVV 133
            Y+ + SYR TV ATD     +   A VNI V+
Sbjct: 907 SYDYKPSYRMTVIATDQGVPPLQGQAIVNIQVI 939


>gi|444732649|gb|ELW72931.1| Protocadherin-11 X-linked [Tupaia chinensis]
          Length = 907

 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 89/329 (27%), Positives = 137/329 (41%), Gaps = 80/329 (24%)

Query: 11  ITLVVRAIQYDNQDRYALATL--------IVSKAGTSLRELQ-------FSKNEYSVSAL 55
           I   V+ +  + Q++Y+   L        +++ A   L  L        F+ NEY+    
Sbjct: 521 ILTAVKKLDREKQEKYSFTVLAKDNGIPPLITNATVFLTVLDQNDNSPVFTHNEYNFYVP 580

Query: 56  ENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGER-------------FSISRQ-GDISLMQ 101
           ENLP +  +  +T   P           DYGE              F+I  Q G I    
Sbjct: 581 ENLPRHGTVGLITVTDP-----------DYGENSAVTLSILDVNDDFTIDPQTGVIRPNI 629

Query: 102 CLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYP----QYELFLPHI 154
             D E ++SY F V A D      +++A V I+VV+VND  P F  P     +EL LP  
Sbjct: 630 SFDREKQESYTFYVKAEDGGRVSRSSTAKVTINVVDVNDNKPVFVVPPSNYSFELVLPST 689

Query: 155 PLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIND-SGHISIVDLS-ALNT 209
                 PG+V+ +V A D D G    L    + G    +F+I+  +G+I++ +   + + 
Sbjct: 690 -----NPGTVVFQVVAVDNDTGINAELRYSIVGGNTNGLFTIDQTTGNITLKEKCISADL 744

Query: 210 STIQLVVVATDTGNPPRQASVPAIMHFP------------------EAIVQQ--ASSKLN 249
              +LVV A D G P    SV  +  F                   EA V Q   ++  +
Sbjct: 745 GLHRLVVKAKDLGQPDSLFSVIVVNLFVNESVTNATLIYELVRKSIEAPVTQNVETTDAS 804

Query: 250 SGTSSTVLIILGVVLIVLGFVIILLILYI 278
           S  S  V I   VV IV G + ++L+++I
Sbjct: 805 SPISDYVKI---VVAIVAGAITVILVIFI 830



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 37/117 (31%), Positives = 62/117 (52%), Gaps = 10/117 (8%)

Query: 73  RDLRVKYWLSNDYGERFSISRQ-GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATV 128
           R+  V Y L  D    F++ R+ G ++ ++ LD E ++ Y FTV A D     + T+ATV
Sbjct: 497 RNAEVSYLLGIDAPSEFNLDRRTGILTAVKKLDREKQEKYSFTVLAKDNGIPPLITNATV 556

Query: 129 NISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDR--VTLSL 183
            ++V++ ND  P F + +Y  ++P     +L     +G +   D D G+   VTLS+
Sbjct: 557 FLTVLDQNDNSPVFTHNEYNFYVPE----NLPRHGTVGLITVTDPDYGENSAVTLSI 609



 Score = 42.4 bits (98), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 49/184 (26%), Positives = 74/184 (40%), Gaps = 20/184 (10%)

Query: 56  ENLPVN-YVLLTVTTNKPRDLRVKYWLSNDYGERFSI----SRQGDISLMQCLDYETEDS 110
           EN P+N  V L   T+K  D   +     D+   F +    S Q  +     LDYE+   
Sbjct: 372 ENAPLNTKVALITVTDKDADHNGRVTCFTDHEVPFRLRPVFSNQFLLETAAFLDYESTKE 431

Query: 111 YRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGK 167
           Y   + A D     +  SA + + V + ND  P F  P   L +P     +  PG+ + K
Sbjct: 432 YAIKLLAADAGKPPLNQSAMLLVKVKDENDNAPVFTQPSISLSVPE----NNFPGAQLTK 487

Query: 168 VEAADGDKGDRVTLS----LRGPYEKMFSINDSGHI--SIVDLSALNTSTIQLVVVATDT 221
           + A D D G    +S    +  P E  F+++    I  ++  L           V+A D 
Sbjct: 488 ISATDADSGRNAEVSYLLGIDAPSE--FNLDRRTGILTAVKKLDREKQEKYSFTVLAKDN 545

Query: 222 GNPP 225
           G PP
Sbjct: 546 GIPP 549



 Score = 38.9 bits (89), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 35/139 (25%), Positives = 69/139 (49%), Gaps = 15/139 (10%)

Query: 103 LDYETEDSYRFTVYATDTLM---TTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADL 159
           LD E +D+Y   V   D      +++A + +SV + ND  P F   + E+ +P     + 
Sbjct: 207 LDREEKDTYVMKVKVEDGGFPQRSSTAILQVSVADTNDNHPVFTEKEIEVSIPE----NA 262

Query: 160 TPGSVIGKVEAADGDKGDRVTLS------LRGPYEKMFSIN-DSGHISIVD-LSALNTST 211
             G+ + ++ A D D G+   +       +    +++F +N  +G I+I + L    + +
Sbjct: 263 PVGTSVTQLHATDADIGENAKIHFYFSNLVSNIAKRLFHLNTTTGLITIKEPLDREESPS 322

Query: 212 IQLVVVATDTGNPPRQASV 230
            +L+V+A+D G+ P +A V
Sbjct: 323 HKLLVLASDGGSTPARAMV 341


>gi|426396596|ref|XP_004064522.1| PREDICTED: protocadherin-11 X-linked-like isoform 1 [Gorilla
           gorilla gorilla]
          Length = 1347

 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 63/195 (32%), Positives = 93/195 (47%), Gaps = 20/195 (10%)

Query: 45  FSKNEYSVSALENLPVNYV--LLTVTTNKPRDLRVKYWLSNDYGERFSISRQ-GDISLMQ 101
           F+ NEY+    ENLP +    L+TVT     D         D  + F+I  Q G I    
Sbjct: 570 FTHNEYNFYVPENLPRHGTVGLITVTDPDYGDNSAVTLSILDENDDFTIDSQTGVIRPNI 629

Query: 102 CLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYP----QYELFLPHI 154
             D E ++SY F V A D      ++SA V I+VV+VND  P F  P     YEL LP  
Sbjct: 630 SFDREKQESYTFYVKAEDGGRVSRSSSAKVTINVVDVNDNKPVFIVPPSNYSYELVLP-- 687

Query: 155 PLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-DSGHISIVDLSALNTS 210
                 PG+V+ +V A D D G    +    + G    +F+I+ ++G+I++++   +   
Sbjct: 688 ---STNPGTVVFQVIAVDNDTGMNAEVRYSIVGGNTRDLFAIDQETGNITLMEKCDVTDL 744

Query: 211 TIQLVVV-ATDTGNP 224
            +  V+V A D G P
Sbjct: 745 GLHRVLVKANDLGQP 759



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/114 (32%), Positives = 61/114 (53%), Gaps = 10/114 (8%)

Query: 76  RVKYWLSNDYGERFSISRQ-GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNIS 131
            + Y L  D    FS+ R+ G +++++ LD E ED Y FT+ A D     +T++ TV +S
Sbjct: 500 EINYLLGPDAPPEFSLDRRTGMLTVVKKLDREKEDKYLFTILAKDNGVPPLTSNVTVFVS 559

Query: 132 VVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDR--VTLSL 183
           +++ ND  P F + +Y  ++P     +L     +G +   D D GD   VTLS+
Sbjct: 560 IIDQNDNSPVFTHNEYNFYVPE----NLPRHGTVGLITVTDPDYGDNSAVTLSI 609



 Score = 38.1 bits (87), Expect = 7.9,   Method: Compositional matrix adjust.
 Identities = 36/139 (25%), Positives = 67/139 (48%), Gaps = 15/139 (10%)

Query: 103 LDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADL 159
           LD E +D+Y   V   D      +++A + +SV + ND  P F+  + E+ +P     + 
Sbjct: 207 LDREEKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVFKETEIEVSIPE----NA 262

Query: 160 TPGSVIGKVEAADGDKGDRVTLS------LRGPYEKMFSIN-DSGHISIVD-LSALNTST 211
             G+ + ++ A D D G+   +       +     ++F +N  +G I+I + L    T  
Sbjct: 263 PVGTSVTQLHATDADIGENAKIHFSFSNLVSNIARRLFHLNATTGLITIKEPLDREETPN 322

Query: 212 IQLVVVATDTGNPPRQASV 230
            +L+V+A+D G  P +A V
Sbjct: 323 HKLLVLASDGGLMPARAMV 341


>gi|410948493|ref|XP_003980973.1| PREDICTED: protocadherin gamma-A2 [Felis catus]
          Length = 819

 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 56/193 (29%), Positives = 88/193 (45%), Gaps = 17/193 (8%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVT---TNKPRDLRVKYWLSNDYGERFSI----SRQGDI 97
           F++ EY VS  E++PV   +LTVT   T++  + +V Y+   + GE   I    S  GDI
Sbjct: 242 FTQPEYRVSVPESMPVGTRILTVTATDTDEGYNAQVAYFQEKNPGETSEIFELESTSGDI 301

Query: 98  SLMQCLDYETEDSYRFTVYATDTL-MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
           +++Q LDYE    +   + A D   + T   V ++V++VND  P F        +P    
Sbjct: 302 TIIQSLDYEDAKVHEIDIEAQDGPGLLTRTKVIVTVLDVNDNAPEFYMTSSTSSIPE--- 358

Query: 157 ADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDS--GHISIVDLSALNT---ST 211
               PG++I      D D G    ++   P    F +  S   +  +V   AL+    S+
Sbjct: 359 -GSPPGTIIALFNVHDRDSGQNAFITCSLPENLPFKLERSVDNYHRLVTTRALDREQFSS 417

Query: 212 IQLVVVATDTGNP 224
             + V A D G P
Sbjct: 418 YNVTVTAKDGGKP 430



 Score = 45.8 bits (107), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 68/274 (24%), Positives = 116/274 (42%), Gaps = 45/274 (16%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPR---DLRVKYWLSNDYGERFSISR-------Q 94
           F    YS    EN P    +++V  + P    +  V Y L+ D  +   +S         
Sbjct: 452 FPHMSYSAYIPENNPRGASIISVVAHDPDSDDNAHVTYSLTEDTLQDAPLSSYISINSDT 511

Query: 95  GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFL 151
           G +  ++  DYE        + A D     ++++ +++I V++ ND  P   YP     L
Sbjct: 512 GVLYALRSFDYEQFQDLHLRLTAWDNGNPPLSSNVSLSIFVLDQNDNAPEILYPA----L 567

Query: 152 P-----HIPLA--DLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-DSGHI- 199
           P      + LA     PG ++ KV A D D G    LS   L+     +F++   +G + 
Sbjct: 568 PTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKASEPGLFTVGLHTGEVR 627

Query: 200 ---SIVDLSALNTSTIQLVVVATDTGNPPRQASVPAIM----HFPEAIVQQASSKLNSGT 252
              +++D  AL  S   LVVV  D G PP  A+V   +    + P+ +    S++  +  
Sbjct: 628 TARALLDRDALKQS---LVVVVQDHGQPPLSATVTLTVAVADNIPDVLADLGSTRTPADP 684

Query: 253 SSTVLII------LGVVLIVLGFVIILLILYIHK 280
           + + L +        V  + L FVI+LL L + +
Sbjct: 685 NDSDLTLYLVVAVAAVSCVFLAFVIVLLGLRLRR 718



 Score = 42.7 bits (99), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 51/177 (28%), Positives = 74/177 (41%), Gaps = 25/177 (14%)

Query: 67  VTTNKPRDLRVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDT---LMT 123
           +T + P +L  K   S D   R   +R         LD E   SY  TV A D     ++
Sbjct: 382 ITCSLPENLPFKLERSVDNYHRLVTTR--------ALDREQFSSYNVTVTAKDGGKPSLS 433

Query: 124 TSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGD--RVTL 181
           T A + + V ++ND  P F +  Y  ++P     +   G+ I  V A D D  D   VT 
Sbjct: 434 TDAYITLQVADINDNPPTFPHMSYSAYIPE----NNPRGASIISVVAHDPDSDDNAHVTY 489

Query: 182 SLR------GPYEKMFSIN-DSGHI-SIVDLSALNTSTIQLVVVATDTGNPPRQASV 230
           SL        P     SIN D+G + ++          + L + A D GNPP  ++V
Sbjct: 490 SLTEDTLQDAPLSSYISINSDTGVLYALRSFDYEQFQDLHLRLTAWDNGNPPLSSNV 546


>gi|351710657|gb|EHB13576.1| Protocadherin-11 X-linked [Heterocephalus glaber]
          Length = 985

 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 73/251 (29%), Positives = 111/251 (44%), Gaps = 37/251 (14%)

Query: 11  ITLVVRAIQYDNQDRYAL---------------ATLIVSKAGTSLRELQFSKNEYSVSAL 55
           I  VV+ +  + Q++Y                 AT+ V+    +     F+ NEY+    
Sbjct: 488 ILTVVKKLDREKQEKYYFTVLAKDNGMPPLMTNATVFVTVLDQNDNSPIFTHNEYNFYVP 547

Query: 56  ENLPVNYVLLTVTTNKP---RDLRVKYWLSNDYGERFSISRQ-GDISLMQCLDYETEDSY 111
           ENLP +  +  +T   P    +  V   +S D  + F+I  Q G I      D E ++SY
Sbjct: 548 ENLPRHGTVGLITVTDPDYGENSAVTLSIS-DVSDEFTIDPQTGVIRPNISFDREKQESY 606

Query: 112 RFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYP----QYELFLPHIPLADLTPGSV 164
            F V A D      +++A V I+VV+VND  P F  P     YEL LP        PG+V
Sbjct: 607 TFYVKAEDGGRVSHSSTAKVTINVVDVNDNKPGFVVPPSNHSYELVLPST-----NPGTV 661

Query: 165 IGKVEAADGDKGDRVTLS---LRGPYEKMFSIND-SGHISIVDLSAL-NTSTIQLVVVAT 219
           + KV A D D G    L    + G  + +F I+  +G+I++ +   + +    +LVV   
Sbjct: 662 VFKVVAIDNDTGMNSELRYSIVGGNTKGLFVIDQTTGNITLKERCVVADLGLHRLVVKVK 721

Query: 220 DTGNPPRQASV 230
           D G P    SV
Sbjct: 722 DLGQPDSLFSV 732



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 37/121 (30%), Positives = 64/121 (52%), Gaps = 10/121 (8%)

Query: 69  TNKPRDLRVKYWLSNDYGERFSISRQ-GDISLMQCLDYETEDSYRFTVYATDTLM---TT 124
           T+   +  + Y L  D    F++ R+ G +++++ LD E ++ Y FTV A D  M    T
Sbjct: 460 TDSGHNAEISYLLGMDAPSEFNLDRRTGILTVVKKLDREKQEKYYFTVLAKDNGMPPLMT 519

Query: 125 SATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDR--VTLS 182
           +ATV ++V++ ND  P F + +Y  ++P     +L     +G +   D D G+   VTLS
Sbjct: 520 NATVFVTVLDQNDNSPIFTHNEYNFYVPE----NLPRHGTVGLITVTDPDYGENSAVTLS 575

Query: 183 L 183
           +
Sbjct: 576 I 576



 Score = 42.4 bits (98), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 39/163 (23%), Positives = 81/163 (49%), Gaps = 19/163 (11%)

Query: 83  NDYGERFSISRQGD----ISLMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNV 135
           N +G   + + +GD    + + + LD E +D+Y   V   D      +++A + +SV + 
Sbjct: 150 NSFGLDVTETSEGDKMPQLIVQKELDREEKDTYVMKVKVEDGGFPQRSSTAILQVSVSDT 209

Query: 136 NDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS------LRGPYEK 189
           ND  P F+  + E+ +P     +   G+ + ++ A D D G+   +       +    ++
Sbjct: 210 NDNHPVFKEQEIEVSIPE----NAPVGTSVTQLHATDADIGENAKIHFYFSNLISNMAKR 265

Query: 190 MFSIN-DSGHISIVD-LSALNTSTIQLVVVATDTGNPPRQASV 230
           +F +N  +G I+I + L      + +L+V+A+D G+ P +A+V
Sbjct: 266 LFHLNTTTGLITIKEPLDREEAPSHKLLVLASDGGSMPAKATV 308


>gi|196012451|ref|XP_002116088.1| hypothetical protein TRIADDRAFT_10055 [Trichoplax adhaerens]
 gi|190581411|gb|EDV21488.1| hypothetical protein TRIADDRAFT_10055 [Trichoplax adhaerens]
          Length = 1027

 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 48/160 (30%), Positives = 83/160 (51%), Gaps = 18/160 (11%)

Query: 79  YWLSNDYGERFSISRQGDISLMQCLDYE--TEDSYRFTVYATDTLM----TTSATVN--I 130
           Y L ND   RF+I+  G+++L + L     T ++Y  T+ A D  +    T S+ +N  I
Sbjct: 793 YQLLNDAQGRFTITSDGNVTLAKSLTTRPITTNTYWITILAEDANINWPITPSSKLNLTI 852

Query: 131 SVVNVNDWDPRF-RYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGD----RVTLSLRG 185
            ++ VN + P+F  YP+  +++      + T  +V+  V A D D G     R  ++ + 
Sbjct: 853 HIIRVNHYQPQFITYPKTPIYIAE----NATVTTVLTSVSAQDNDTGPDSQIRYRIASQS 908

Query: 186 PYEKMFSINDSGHISIV-DLSALNTSTIQLVVVATDTGNP 224
             + +F I+ +GHISI  +L    TS   L ++A D+G+P
Sbjct: 909 NSQGVFKIDQNGHISIAKELDREKTSHYNLTILAMDSGSP 948



 Score = 47.0 bits (110), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 53/202 (26%), Positives = 89/202 (44%), Gaps = 18/202 (8%)

Query: 12  TLVVRAIQYDNQDRYALAT-LIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTV--- 67
           TL V A   +NQ      T +I++   ++     F    YS    EN P +  L  V   
Sbjct: 510 TLAVYAENRNNQPTITSTTQVIITVTDSNDHRPIFQPQHYSTKIEENQPSDTYLTRVYAY 569

Query: 68  --TTNKPRDLRVKYWLSNDYGERFSI-SRQGDISLMQCLDYETED---SYRFTVYATDTL 121
               N     +++Y + N+Y  RF I +  G +   + LD E      SY   + A D L
Sbjct: 570 DQDANNTIHSQIRYQIRNNYQNRFKINTTSGAVMTGKVLDREDSQGSTSYTLIIDAMDGL 629

Query: 122 ---MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDR 178
               TT ATV +++++V+D    F++ QY   +    + + T G+V+G+++ +  D    
Sbjct: 630 GLKSTTPATVLVTILDVSDSPVYFQHNQYNYRV----IENATIGTVVGQIQGSTADINAT 685

Query: 179 VTLSL-RGPYEKMFSINDSGHI 199
           +T  +  G     F IN +  I
Sbjct: 686 LTYQIAAGNINSSFQINSTTGI 707



 Score = 38.5 bits (88), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 33/123 (26%), Positives = 55/123 (44%), Gaps = 13/123 (10%)

Query: 86  GERFSISRQGDISLM---QCLDYETEDSYRFTVYATDTL---MTTSATVNISVVNVNDWD 139
           G+ F +  + + +L+   + LD E    Y+ T+ ATD+    + +S  + I V + ND  
Sbjct: 270 GQVFQLDARENPALVINVKPLDRENISQYQLTINATDSKHPNIMSSGILTIQVTDDNDHQ 329

Query: 140 PRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSINDS 196
           P F+  +Y   LP     +   G  + +  A D D G    L    L G  +  F I+  
Sbjct: 330 PHFQRSEYSALLPQ----NSRGGVFVLRTLAYDNDTGSNSQLQYQILTGNNDFAFQIDQQ 385

Query: 197 GHI 199
           G+I
Sbjct: 386 GNI 388


>gi|426396598|ref|XP_004064523.1| PREDICTED: protocadherin-11 X-linked-like isoform 2 [Gorilla
           gorilla gorilla]
          Length = 1337

 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 63/195 (32%), Positives = 93/195 (47%), Gaps = 20/195 (10%)

Query: 45  FSKNEYSVSALENLPVNYV--LLTVTTNKPRDLRVKYWLSNDYGERFSISRQ-GDISLMQ 101
           F+ NEY+    ENLP +    L+TVT     D         D  + F+I  Q G I    
Sbjct: 570 FTHNEYNFYVPENLPRHGTVGLITVTDPDYGDNSAVTLSILDENDDFTIDSQTGVIRPNI 629

Query: 102 CLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYP----QYELFLPHI 154
             D E ++SY F V A D      ++SA V I+VV+VND  P F  P     YEL LP  
Sbjct: 630 SFDREKQESYTFYVKAEDGGRVSRSSSAKVTINVVDVNDNKPVFIVPPSNYSYELVLP-- 687

Query: 155 PLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-DSGHISIVDLSALNTS 210
                 PG+V+ +V A D D G    +    + G    +F+I+ ++G+I++++   +   
Sbjct: 688 ---STNPGTVVFQVIAVDNDTGMNAEVRYSIVGGNTRDLFAIDQETGNITLMEKCDVTDL 744

Query: 211 TIQLVVV-ATDTGNP 224
            +  V+V A D G P
Sbjct: 745 GLHRVLVKANDLGQP 759



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/114 (32%), Positives = 61/114 (53%), Gaps = 10/114 (8%)

Query: 76  RVKYWLSNDYGERFSISRQ-GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNIS 131
            + Y L  D    FS+ R+ G +++++ LD E ED Y FT+ A D     +T++ TV +S
Sbjct: 500 EINYLLGPDAPPEFSLDRRTGMLTVVKKLDREKEDKYLFTILAKDNGVPPLTSNVTVFVS 559

Query: 132 VVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDR--VTLSL 183
           +++ ND  P F + +Y  ++P     +L     +G +   D D GD   VTLS+
Sbjct: 560 IIDQNDNSPVFTHNEYNFYVPE----NLPRHGTVGLITVTDPDYGDNSAVTLSI 609



 Score = 37.7 bits (86), Expect = 8.4,   Method: Compositional matrix adjust.
 Identities = 36/139 (25%), Positives = 67/139 (48%), Gaps = 15/139 (10%)

Query: 103 LDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADL 159
           LD E +D+Y   V   D      +++A + +SV + ND  P F+  + E+ +P     + 
Sbjct: 207 LDREEKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVFKETEIEVSIPE----NA 262

Query: 160 TPGSVIGKVEAADGDKGDRVTLS------LRGPYEKMFSIN-DSGHISIVD-LSALNTST 211
             G+ + ++ A D D G+   +       +     ++F +N  +G I+I + L    T  
Sbjct: 263 PVGTSVTQLHATDADIGENAKIHFSFSNLVSNIARRLFHLNATTGLITIKEPLDREETPN 322

Query: 212 IQLVVVATDTGNPPRQASV 230
            +L+V+A+D G  P +A V
Sbjct: 323 HKLLVLASDGGLMPARAMV 341


>gi|326916835|ref|XP_003204710.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin-16-like [Meleagris
            gallopavo]
          Length = 3001

 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 74/269 (27%), Positives = 118/269 (43%), Gaps = 37/269 (13%)

Query: 1    DINEDDFLQPITLVV---RAIQYDNQDRYALATLIVSKAGTSLRELQ------------- 44
            D  +D  L P++ V+   RA+  +    Y+L T++V   GT  R                
Sbjct: 1486 DPEQDFILDPVSGVLSTARALDREQVAFYSL-TVVVQDHGTPPRSATMSVNVQVLDLNDN 1544

Query: 45   ---FSKNEYSVSALENLPVNYVLLTVTTNKPRDL---RVKYWLSNDYGERFSISRQ-GDI 97
               F++  Y V   E+LPV  ++L +    P +    +V Y+L N+    F +  Q G I
Sbjct: 1545 APGFAQASYVVEVPEDLPVGSLVLQLEAKDPDEGTNGQVTYYLGNESLGMFQVEPQSGRI 1604

Query: 98   SLMQCLDYETEDSYRFTVYATDTL----MTTSATVNISVVNVNDWDPRFRYPQYELFLP- 152
               Q LD E + SY F   A D+      + +  V ++V +VND  P F +    + L  
Sbjct: 1605 RSAQELDRERQPSYSFLAKAVDSAPWEPKSAAVRVTVTVRDVNDHAPAFLHSPLTVSLSR 1664

Query: 153  HIPLADLTPGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSIND-SGHISIVD-LSALNT 209
            H P     P  V+  + A D D G   ++  R       FSIN  +G I ++  LS+L+ 
Sbjct: 1665 HTP-----PKQVVATMRAEDRDAGANASILYRLATPNSAFSINSYTGDIQLLQPLSSLSQ 1719

Query: 210  STIQLVVVATDTGNPPRQASVPAIMHFPE 238
                L ++ATD G P   ++   ++H  E
Sbjct: 1720 RQRTLFILATDLGQPALSSTGVVVIHLQE 1748



 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 61/200 (30%), Positives = 89/200 (44%), Gaps = 19/200 (9%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTT--NKPRDLRVKYWLSNDY-GERFSI-SRQGDISLM 100
            F    Y V   E +PV+   L V         + + Y L  D     F I S  G + + 
Sbjct: 974  FDTLTYRVEVREGVPVSTRFLQVRALARDAEAVTLTYHLRADGDAASFGITSESGWLYVK 1033

Query: 101  QCLDYETEDSYRFTVYAT--------DTLMTTSATVNISVVNVNDWDPRFRYPQYELFLP 152
              LD ET D Y  TV A+        +   T ++TV IS+ + ND  PR    +Y   +P
Sbjct: 1034 SALDRETRDLYVLTVLASAGGGGSGGEARKTGTSTVRISITDENDNSPRLSEERYFFTVP 1093

Query: 153  HIPLADLTPGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSIN-DSGHISIV-DLSALNT 209
                 +  PGS +G+V A+D D G    L+ R   ++  F I+  +G +S    L     
Sbjct: 1094 E----NQAPGSSVGRVMASDRDAGQNSRLTYRLLQHDSNFLIHTQTGELSTKHSLDREQQ 1149

Query: 210  STIQLVVVATDTGNPPRQAS 229
            S+ QL+V+  D G PPR A+
Sbjct: 1150 SSYQLLVIVQDGGAPPRSAT 1169



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 51/151 (33%), Positives = 71/151 (47%), Gaps = 13/151 (8%)

Query: 81   LSNDYGERFSISRQGD-ISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWD 139
            L  D    FS+ R G  I+L   LDYE    Y  T+ A+D+   T A + + V +VND  
Sbjct: 2016 LDGDAVGTFSVLRYGGRIALTGPLDYEQRSHYSLTLRASDSRHETEANLTVIVEDVNDNA 2075

Query: 140  PRFRYPQYELFLP-HIPLADLTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSINDS 196
            P F    Y++ LP H P      GS++  + A D D G    +T  L  P   +     +
Sbjct: 2076 PAFSQAFYQVTLPEHTPA-----GSILLTMSATDMDSGSNGEITFHLAVPSLDVAIDPSN 2130

Query: 197  G---HISIVDLSALNTSTIQLVVVATDTGNP 224
            G    I  V+  A N  T++LVV A D G+P
Sbjct: 2131 GTLFTIRPVEFDA-NQPTLELVVEARDHGSP 2160



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 62/210 (29%), Positives = 97/210 (46%), Gaps = 19/210 (9%)

Query: 29  ATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVT-TNKPRDL--RVKYWLSNDY 85
           A ++V+    +  E  F  N Y+VS  EN PV    L VT T+    L   + Y L +  
Sbjct: 539 AVVLVALQDVNDNEPVFRSNFYNVSLKENTPVGTCFLQVTATDADSGLFGTLSYSLGSGI 598

Query: 86  GE----RFSISRQ-GDISLMQCLDY-ETEDSYRFTVYATD-TLMTTSATVNISVVNVNDW 138
           G     +F I +  G +   Q LD  E   +Y FT+ A D   + +   V + + ++ND 
Sbjct: 599 GSVVPTQFGIDKHTGHLCTAQPLDRDEGTSAYDFTITAVDGGGLNSMVYVKVFLEDINDN 658

Query: 139 DPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR---GPYEKMFSIN- 194
            P F   +Y   +    +    PG+ + +V A D D+G    ++ R   G    +FS+N 
Sbjct: 659 RPVFYPLEYAASISTQSM----PGTAVLRVTAHDKDEGMHGKVTYRIVLGNSPPLFSLNK 714

Query: 195 DSGHISIV-DLSALNTSTIQLVVVATDTGN 223
           D+G IS+   LS    + +QLV+ A D G 
Sbjct: 715 DTGVISLSWSLSGKANTLVQLVISAEDGGG 744



 Score = 48.9 bits (115), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 47/168 (27%), Positives = 77/168 (45%), Gaps = 31/168 (18%)

Query: 84  DYGE-------------RFSISRQGDISLMQC----LDYETEDSYRFTVYATDT---LMT 123
           DYGE             +F+++ + +I  + C    LD E  DSY   V ATD+    + 
Sbjct: 370 DYGEYSNVNVTLEGGDGKFALTTKDNIIYLICVDQLLDREERDSYDLRVTATDSGTPPLR 429

Query: 124 TSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTL 181
             +T  + V+++ND  P F   +Y+  +P +    + PGS + +V A D D+G    V  
Sbjct: 430 AESTFVLQVIDINDNPPLFDQQEYKQSIPEV----VYPGSFVLQVTARDKDQGPNGEVQY 485

Query: 182 SLRGP---YEKMFSINDSGHI--SIVDLSALNTSTIQLVVVATDTGNP 224
           S++     +   F+I+ +  I  +   L        QL V+ATD G P
Sbjct: 486 SIKHSQDTHSSWFAIDPATGIITTAAPLDYEKDPQPQLTVLATDRGTP 533



 Score = 45.1 bits (105), Expect = 0.063,   Method: Compositional matrix adjust.
 Identities = 58/199 (29%), Positives = 83/199 (41%), Gaps = 21/199 (10%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSND--YGERFSISRQ-GDISLMQ 101
            F K EY     ENLP    +L V     RDL     ++     G  FSI  Q G I    
Sbjct: 1342 FEKPEYEAHITENLPAGSPVLQVLATD-RDLGANGQVTYGGLSGGPFSIHPQTGLIVTTH 1400

Query: 102  CLDYETEDSYRFTVYATDTLMT---TSATVNISVVNVNDWDPRFRYPQYELFLPH----I 154
             LD E ++ +   VYA D  +    + ATV I+V + ND  P+       + +P     +
Sbjct: 1401 PLDREEQEQHVLMVYARDGGLPPNLSKATVRITVGDENDHTPQLESESCSVEVPENQSRV 1460

Query: 155  PLADLTPGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSIND-SGHISIVD-LSALNTST 211
             L  L       +    DGD+  R+   +  G  E+ F ++  SG +S    L     + 
Sbjct: 1461 ALYTL-------RATDPDGDENGRLEYRVADGDPEQDFILDPVSGVLSTARALDREQVAF 1513

Query: 212  IQLVVVATDTGNPPRQASV 230
              L VV  D G PPR A++
Sbjct: 1514 YSLTVVVQDHGTPPRSATM 1532



 Score = 42.7 bits (99), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 50/193 (25%), Positives = 78/193 (40%), Gaps = 23/193 (11%)

Query: 89   FSI-SRQGDISLMQCLDYETEDSYRFTVYATDTL-MTTSATVNISVVNVNDWDPRFRYPQ 146
            F+I S  G++      DYE   +++  V ATD    + + TV + V   +++DP F  P 
Sbjct: 2458 FAINSSSGELRSRLTFDYERAKAFQLLVRATDAGNASATVTVRVLVTGEDEYDPIFLSPS 2517

Query: 147  YELFLPHIPLADLTPGSVIGKVEAADGDKG-DRVTLSLRGPYEKMFSINDSGHISIVDLS 205
            +   +P         G  IG+V A D D+G D V L         F+IN +         
Sbjct: 2518 FSFEVPE----GAHKGQSIGRVLATDEDEGADGVVLYNLAKPSPYFAINQT--------- 2564

Query: 206  ALNTSTIQLVVVATDTGNPPRQASVPAIMHFPEAIVQQASSKLNSGTSSTVLIILGVVLI 265
               T TI L V +       R    P  M    ++  QA S L +  S++  + + V   
Sbjct: 2565 ---TGTIYLRVDSQPQAGAGRTKREPREM----SLEVQARSPLPASRSASAQVTIDVTHT 2617

Query: 266  VLGFVIILLILYI 278
              G    L +L +
Sbjct: 2618 SFGLAPDLNLLLV 2630



 Score = 40.8 bits (94), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 7/85 (8%)

Query: 96  DISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLP 152
           D+ +   LD E   SY   + A D      ++  T+++SV ++ND  P F   +Y   + 
Sbjct: 182 DLVVSNVLDRENRSSYSLVLEAYDGGSPPRSSQMTLDVSVQDINDNAPTFNQSRYHTLIS 241

Query: 153 HIPLADLTPGSVIGKVEAADGDKGD 177
                +L PGS I +V A+D D+GD
Sbjct: 242 E----NLKPGSSILQVFASDADEGD 262



 Score = 39.3 bits (90), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 45/137 (32%), Positives = 66/137 (48%), Gaps = 11/137 (8%)

Query: 95   GDISLMQCLDYETEDSYRFTVYATD-TLMTTSAT--VNISVVNVNDWDPRFRYPQYELFL 151
            G +S+++ L+ E    +  TV A D      SAT  ++I V++VND  P F  P+YE   
Sbjct: 1292 GALSVVRALNREEVVQHNLTVVAADHGFPRRSATQLLSILVLDVNDEAPTFEKPEYEA-- 1349

Query: 152  PHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSGHISIVDLSALNTST 211
             HI   +L  GS + +V A D D G    ++  G     FSI+    + IV    L+   
Sbjct: 1350 -HI-TENLPAGSPVLQVLATDRDLGANGQVTYGGLSGGPFSIHPQTGL-IVTTHPLDREE 1406

Query: 212  IQ---LVVVATDTGNPP 225
             +   L+V A D G PP
Sbjct: 1407 QEQHVLMVYARDGGLPP 1423



 Score = 39.3 bits (90), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 44/152 (28%), Positives = 63/152 (41%), Gaps = 25/152 (16%)

Query: 94  QGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLP- 152
           +G I   + LD ET D Y F     + +   +  VNI V ++ND  P F        +P 
Sbjct: 74  RGIIKTARVLDRETRDHYSFIAVTPEGI---TVEVNIQVNDINDHAPAFPKQHSTFQIPE 130

Query: 153 HIPLADLTPGSVIGKVEAADGD-----------KGDRVTLSLRGPYEKMFSINDSGHISI 201
           H P+     GS      A D D           KGD V  + R   E     N   ++ +
Sbjct: 131 HTPV-----GSRFPLDPAFDADSGLLNTQGYVIKGDNVGQAFR--LETRRGPNGVLYLDL 183

Query: 202 VDLSAL---NTSTIQLVVVATDTGNPPRQASV 230
           V  + L   N S+  LV+ A D G+PPR + +
Sbjct: 184 VVSNVLDRENRSSYSLVLEAYDGGSPPRSSQM 215



 Score = 38.1 bits (87), Expect = 7.7,   Method: Compositional matrix adjust.
 Identities = 50/214 (23%), Positives = 94/214 (43%), Gaps = 29/214 (13%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGERFSISRQGDISLMQ 101
            FS+  Y V+  E+ P   +LLT++    +   +  + + L+    +       G +  ++
Sbjct: 2078 FSQAFYQVTLPEHTPAGSILLTMSATDMDSGSNGEITFHLAVPSLDVAIDPSNGTLFTIR 2137

Query: 102  CLDYET-EDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLA 157
             ++++  + +    V A D     +++ ATV + V++VND  P F+ P Y   +P     
Sbjct: 2138 PVEFDANQPTLELVVEARDHGSPSLSSWATVQLQVLDVNDHSPIFQVPHYNASVPE---- 2193

Query: 158  DLTPGSVIGKVEAADGD-----KGDRVTLSLRGPYEKMFSIND-----SGHI----SIVD 203
            DL PG+ +  ++A D D      G   T+ + G     F +        G +    ++V 
Sbjct: 2194 DLRPGTTVLTLDAGDADLSRENAGFDYTI-VSGNGGNAFQVESRVAWAGGQLRTQGALVL 2252

Query: 204  LSALNTSTI---QLVVVATDTGNPPRQASVPAIM 234
            +  L+   I    L V A D G P R  +VP ++
Sbjct: 2253 VEPLDFEAIPVYNLTVAALDRGLPQRSTTVPVLI 2286


>gi|149589942|ref|XP_001516095.1| PREDICTED: protocadherin gamma-B5-like, partial [Ornithorhynchus
           anatinus]
          Length = 696

 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 55/213 (25%), Positives = 99/213 (46%), Gaps = 21/213 (9%)

Query: 95  GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYE--- 148
           GDI   +  DYE   ++   V A D+    +  + TV + +V+ ND  PR  YP  E   
Sbjct: 398 GDIYAQRSFDYEQFRAFELHVQAQDSGSPPLRANVTVCVFIVDQNDNAPRILYPALEPDG 457

Query: 149 -LFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-DSGHISIVD 203
                 +P +   PG ++ KV A D D G    L+   L+     +FS+   +G I    
Sbjct: 458 SALFDMVPRS-AEPGYLVSKVVAVDADSGPNAWLAYHVLQASDPGLFSLGLRTGEIRTAR 516

Query: 204 -LSALNTSTIQLVVVATDTGNPPRQASVPAIMHFPEAIVQQASSKLNSGTSST------- 255
            L+  + S  +L+V   D G PP  ++V   + F +++ Q+A  +LN  +S +       
Sbjct: 517 ALAVGDPSRHRLLVAVRDGGQPPLSSTVALHLVFADSL-QEALPELNDRSSPSPNQTDLQ 575

Query: 256 VLIILGVVLIVLGFVIILLILYIHKNKHTKNNG 288
             ++L + LI + F++ +++    + +H+   G
Sbjct: 576 FYLVLALALISVLFLVTVILAIGMRCRHSSKPG 608



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 57/195 (29%), Positives = 85/195 (43%), Gaps = 19/195 (9%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGERFSISRQ--------GD 96
           F ++ Y+VS  E+LP    +L V     RD  V   +S  +      +R         G 
Sbjct: 128 FKQDVYTVSLRESLPPGSPVLRVEATD-RDDGVNAQVSYGFKAIQDNARNVFNLDPFSGQ 186

Query: 97  ISLMQCLDYETEDSYRFTVYATDTL-MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIP 155
           I     LD+E  +SY  TV A D   +T    + I +++ ND  P   +      +P   
Sbjct: 187 IKASGILDFEETNSYTITVEAKDGGGLTAECKIIIEILDDNDNAPDVTFTSASSTVPE-- 244

Query: 156 LADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSI--NDSGHISIVDLSALN---TS 210
             D  PG+VI  ++  D D GD   ++ R   E  F I  + S +  +V  S L+   T+
Sbjct: 245 --DSEPGTVIALIKIRDRDSGDNGVVTCRIEGEVPFKIVSSSSNYYKLVTDSFLDREQTA 302

Query: 211 TIQLVVVATDTGNPP 225
              + V ATD GNPP
Sbjct: 303 EYNITVTATDRGNPP 317



 Score = 38.9 bits (89), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 31/86 (36%), Positives = 44/86 (51%), Gaps = 9/86 (10%)

Query: 103 LDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADL 159
           LD E    Y  TV ATD     +TTS T+++ V +VND  P F    Y  ++P     + 
Sbjct: 296 LDREQTAEYNITVTATDRGNPPLTTSKTISLLVADVNDNPPVFPQAVYMAYIPE----NN 351

Query: 160 TPGSVIGKVEAADG--DKGDRVTLSL 183
            PG+ I +V A+D   D   R++ SL
Sbjct: 352 RPGASIYRVTASDRDLDSNARISYSL 377


>gi|109079047|ref|XP_001091889.1| PREDICTED: protocadherin beta-14 isoform 2 [Macaca mulatta]
          Length = 798

 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 53/175 (30%), Positives = 77/175 (44%), Gaps = 25/175 (14%)

Query: 95  GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFL 151
           G +  ++ LDYE    + F V ATD     +++ A V + V++ ND  P   YP      
Sbjct: 511 GHLFALRSLDYEALQEFEFRVGATDRGSPALSSEALVRVLVLDANDNSPFVLYPLQNGSA 570

Query: 152 PHIPLADLT--PGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSI-NDSGHISIVD-L 204
           P   L   T  PG ++ KV A DGD G    LS   L+     +F +   +G +     L
Sbjct: 571 PCTELVPRTAEPGYLVTKVVAVDGDSGQNAWLSYQLLKATEPGLFGVWAHNGEVRTARLL 630

Query: 205 SALNTSTIQLVVVATDTGNPPRQASVPAIMH-------------FPEAIVQQASS 246
           S    +  +LVV+  D G PPR A+  A +H              PEA+  QA +
Sbjct: 631 SEREAARHRLVVLVKDNGEPPRSAT--ATLHVLLVDGFSQPYLPLPEAVPAQAQA 683



 Score = 44.3 bits (103), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 45/139 (32%), Positives = 63/139 (45%), Gaps = 21/139 (15%)

Query: 101 QCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLA 157
           + LD E++  Y  T+  TD     + T   + + V +VND  P F    Y LF+      
Sbjct: 407 KALDRESQAEYNITITVTDLGTPRLKTEYNITVLVSDVNDNAPAFTRTSYTLFVRE---- 462

Query: 158 DLTPGSVIGKVEAADGDKGDR--VTLSL------RGPYEKMFSIN-DSGHISIVDLSALN 208
           + +P   IG V A D D G    VT SL        P   + SIN D+GH  +  L +L+
Sbjct: 463 NNSPALHIGSVSATDRDSGTNALVTYSLLPSQDPHLPLASLVSINTDNGH--LFALRSLD 520

Query: 209 TSTIQ---LVVVATDTGNP 224
              +Q     V ATD G+P
Sbjct: 521 YEALQEFEFRVGATDRGSP 539


>gi|426350409|ref|XP_004042767.1| PREDICTED: protocadherin beta-8, partial [Gorilla gorilla gorilla]
          Length = 543

 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 54/208 (25%), Positives = 93/208 (44%), Gaps = 17/208 (8%)

Query: 95  GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFL 151
           G +  ++ LDYE   ++ F V A+D     +++ A V + V++ ND  P   YP      
Sbjct: 254 GHLFALRSLDYEALQAFEFRVGASDRGSPALSSEALVRVLVLDANDNSPFVLYPLQNGSA 313

Query: 152 PHIPLADLT--PGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSI-NDSGHISIVD-L 204
           P   L      PG ++ KV A DGD G    LS   L+     +F +   +G +     L
Sbjct: 314 PCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKATEPGLFGVWAHNGEVRTARLL 373

Query: 205 SALNTSTIQLVVVATDTGNPPRQASVPAIMHFPEAIVQ------QASSKLNSGTSSTVLI 258
           S  + +  +LVV+  D G PPR A+    M   +   Q      +A+     G S TV +
Sbjct: 374 SERDAAKHRLVVLVKDNGEPPRSATATLHMLLVDGFSQPFLPLPEAAPAQGQGDSLTVYL 433

Query: 259 ILGVVLIVLGFVI-ILLILYIHKNKHTK 285
           ++ +  +   F+  +LL + +   + ++
Sbjct: 434 VVALASVSSLFLFSVLLFVAVRLCRRSR 461



 Score = 42.4 bits (98), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 44/137 (32%), Positives = 62/137 (45%), Gaps = 21/137 (15%)

Query: 103 LDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADL 159
           LD E+   Y  ++  TD     +TT   + + V +VND  P F    Y LF+      + 
Sbjct: 152 LDRESRAEYNVSITVTDLGTPRLTTHLNMTVLVSDVNDNAPAFTQTSYTLFVRE----NN 207

Query: 160 TPGSVIGKVEAADGDKGD--RVTLSL------RGPYEKMFSIN-DSGH---ISIVDLSAL 207
           +P   IG V A D D G   +VT SL        P   + SIN D+GH   +  +D  AL
Sbjct: 208 SPAMHIGSVSATDRDSGTNAQVTYSLLPPQNPHLPLTSLVSINADNGHLFALRSLDYEAL 267

Query: 208 NTSTIQLVVVATDTGNP 224
                +  V A+D G+P
Sbjct: 268 Q--AFEFRVGASDRGSP 282


>gi|348525992|ref|XP_003450505.1| PREDICTED: protocadherin-1-like [Oreochromis niloticus]
          Length = 1218

 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 90/343 (26%), Positives = 145/343 (42%), Gaps = 40/343 (11%)

Query: 29  ATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDY 85
           AT+++     +  + +F  + YS S LEN+P    +  VT    +K  + RV   +  D 
Sbjct: 588 ATVVIKVIDRNDNDPKFMLSGYSFSVLENMPPLSPVGMVTVLDMDKGENARVHLSVEPDE 647

Query: 86  GERFSISRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRF 142
           G+    +  G I      D E E SY F + A D      ++   V I+V++ ND DP  
Sbjct: 648 GKFVVQNGTGTILSSISFDREKESSYNFRLKAVDGGEPPRSSYVGVTINVLDENDNDPVI 707

Query: 143 RYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTL--SLRG--PYEKMFSIN-DSG 197
             P    F    PLA  +P S +  VEA D D G    L  S+ G  PY+ +F I+  SG
Sbjct: 708 TKPSNSSFRRLSPLA--SPDSHVEVVEAEDLDNGPNAELVFSIAGGNPYQ-LFRISPSSG 764

Query: 198 HISIV-DLSALNTSTIQLVVVATDTGNPPRQASVPAIMH-----------FPEAIVQQ-- 243
            I++  +++  +    +LVV  +D G P R A+  A++H             EA+V    
Sbjct: 765 EITLAKEMTRKHGGLHRLVVRVSDKGKPARHAT--ALVHIYVNETISNVSLVEALVGHSL 822

Query: 244 --------ASSKLNSGTSSTVLIILGVVLIVLGFV-IILLILYI-HKNKHTKNNGPPGSS 293
                   A    N   +    I+ G +  V G V +IL++++I H+ +    +G     
Sbjct: 823 YTPLDRDIAGDPDNGFAAQRSNILFGSLAGVAGVVMLILVVVFIRHRIQRETKSGYQAGK 882

Query: 294 HSKNDSFLSNVILPEKHVNVVAIPKIQENPVFNGSQEELQTQR 336
               D +                 K Q++P   G +EE+  Q+
Sbjct: 883 KETKDLYAPKQAPKNTKGKRGRKGKPQKSPKPLGEEEEVSLQK 925



 Score = 58.5 bits (140), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 46/142 (32%), Positives = 66/142 (46%), Gaps = 10/142 (7%)

Query: 95  GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFL 151
           G++     LD E ++ Y F V A D    +   +ATV I V++ ND DP+F    Y   +
Sbjct: 554 GEVRAKSSLDREHKEQYEFRVTAADKGSPVHKGTATVVIKVIDRNDNDPKFMLSGYSFSV 613

Query: 152 PHIPLADLTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSINDSGHI-SIVDLSALN 208
               L ++ P S +G V   D DKG+  RV LS+     K    N +G I S +      
Sbjct: 614 ----LENMPPLSPVGMVTVLDMDKGENARVHLSVEPDEGKFVVQNGTGTILSSISFDREK 669

Query: 209 TSTIQLVVVATDTGNPPRQASV 230
            S+    + A D G PPR + V
Sbjct: 670 ESSYNFRLKAVDGGEPPRSSYV 691


>gi|344275027|ref|XP_003409315.1| PREDICTED: protocadherin-15 isoform 9 [Loxodonta africana]
          Length = 1681

 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 67/242 (27%), Positives = 112/242 (46%), Gaps = 29/242 (11%)

Query: 6   DFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVL- 64
           DF Q   LV++A Q +     A A+L +     + +   F+   Y    LE+ PV   + 
Sbjct: 361 DFHQKFDLVIKAEQDNGHPLPAFASLHIEILDENNQSPYFTMPAYQGYILESAPVGSTIS 420

Query: 65  --LTVTT-----------NKPRDLRVKYWLSNDYGERFSISRQG---DISLMQCLDYETE 108
             L +TT              +D  V  +L NDY   F++++ G    ++L+Q +D E +
Sbjct: 421 DSLNLTTPLRIIVLDKDVEDTKDPEVHLFL-NDYTSVFTVTQTGITRYLTLLQPVDREEQ 479

Query: 109 DSYRFTVYATDTLMTTSAT-VNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGK 167
            +Y F++ A D +  +    VNI V++ ND  P F    YE+++      D++PG  + +
Sbjct: 480 QTYTFSITAFDGVQESEPVIVNIQVMDANDNTPTFPEISYEVYV----YTDMSPGDSVIQ 535

Query: 168 VEAADGDKGD--RVTLSLRGPYEKMFSIND-SGHISIV-DLSALNTSTIQLVVVATDTGN 223
           + A D D+G    +T  +    +  F IN  +G I+I   +  +   T  L V A D  N
Sbjct: 536 LTAVDADEGSNGEITYEILVGDQGDFIINKTTGLITIAPGVELIVGRTYALTVQAAD--N 593

Query: 224 PP 225
           PP
Sbjct: 594 PP 595



 Score = 48.5 bits (114), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 70/233 (30%), Positives = 102/233 (43%), Gaps = 26/233 (11%)

Query: 13   LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKP 72
            LVV A       R++  TL +           F+ + Y+V   ENLP     L +   K 
Sbjct: 792  LVVVATDGAVHPRHSTLTLAIKVLDIDDNSPVFTNSTYTVVVEENLPAGTTFLKIEA-KD 850

Query: 73   RDL--RVKYWLSNDYGERFSISR--QGDISLMQCLDYET----EDSYRFTVYATD---TL 121
             DL   V Y + +   + F       G++SL++ LDYE     E +  F V A D   T+
Sbjct: 851  VDLGANVSYRIRSPEVKHFFALHPFTGELSLLRSLDYEAFPEQEATITFLVEAFDIYGTM 910

Query: 122  MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDK----GD 177
                ATV + V ++ND+ P F    Y+  +      D   G+ I  V A D D       
Sbjct: 911  PPGIATVTVIVKDMNDYPPVFNKRIYKGMV----APDAVKGTPITTVYAEDADPPGLPAS 966

Query: 178  RVTL---SLRGPY-EKMFSI-NDSGH-ISIVDLSALNTSTIQLVVVATDTGNP 224
            RV      ++ PY   +F +  DSG  I+ V+L+   T+  +LVVVA D G P
Sbjct: 967  RVRYRVDDVQFPYPASIFDVVEDSGLVITRVNLNEEPTTIFKLVVVAFDDGEP 1019



 Score = 46.2 bits (108), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 53/193 (27%), Positives = 94/193 (48%), Gaps = 10/193 (5%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGER-FSISRQ-GDISLMQ 101
           +F +  YS+   E + +  VLL +         + Y + N   +R F++S   G ++L +
Sbjct: 620 RFPQLMYSLEISEAMRIGAVLLNLQATDREGDPITYAIENGDPQRVFNLSENTGILTLGK 679

Query: 102 CLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLP-HIPLADLT 160
            LD E+ D Y   V A+D     ++T  ++VV  +        P ++ +LP ++ + +  
Sbjct: 680 ALDRESTDRYILIVTASDGRPDGTSTATVNVVVTDV---NDNAPVFDPYLPRNLSVVEEE 736

Query: 161 PGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDSGHI-SIVDLSALNTSTIQLVVV 217
             + +G+V A D D G   +V  SL G +  +F I  +G I + V L+       +LVVV
Sbjct: 737 ANAFVGQVRATDPDAGINGQVHYSL-GNFNNLFRITSNGSIYTAVKLNREVRDYYELVVV 795

Query: 218 ATDTGNPPRQASV 230
           ATD    PR +++
Sbjct: 796 ATDGAVHPRHSTL 808



 Score = 45.8 bits (107), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 50/171 (29%), Positives = 80/171 (46%), Gaps = 17/171 (9%)

Query: 76  RVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDTLMT---TSATVNISV 132
           +V Y L N +   F I+  G I     L+ E  D Y   V ATD  +    ++ T+ I V
Sbjct: 756 QVHYSLGN-FNNLFRITSNGSIYTAVKLNREVRDYYELVVVATDGAVHPRHSTLTLAIKV 814

Query: 133 VNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEK-MF 191
           ++++D  P F    Y + +      +L  G+   K+EA D D G  V+  +R P  K  F
Sbjct: 815 LDIDDNSPVFTNSTYTVVVEE----NLPAGTTFLKIEAKDVDLGANVSYRIRSPEVKHFF 870

Query: 192 SIND-SGHISI---VDLSAL--NTSTIQLVVVATDTGN--PPRQASVPAIM 234
           +++  +G +S+   +D  A     +TI  +V A D     PP  A+V  I+
Sbjct: 871 ALHPFTGELSLLRSLDYEAFPEQEATITFLVEAFDIYGTMPPGIATVTVIV 921


>gi|14589920|ref|NP_116750.1| protocadherin-11 X-linked isoform c precursor [Homo sapiens]
 gi|74761344|sp|Q9BZA7.1|PC11X_HUMAN RecName: Full=Protocadherin-11 X-linked; Short=Protocadherin-11;
           AltName: Full=Protocadherin on the X chromosome;
           Short=PCDH-X; AltName: Full=Protocadherin-S; Flags:
           Precursor
 gi|13161063|gb|AAK13470.1|AF332218_1 protocadherin 11 [Homo sapiens]
          Length = 1347

 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 63/195 (32%), Positives = 93/195 (47%), Gaps = 20/195 (10%)

Query: 45  FSKNEYSVSALENLPVNYV--LLTVTTNKPRDLRVKYWLSNDYGERFSISRQ-GDISLMQ 101
           F+ NEY+    ENLP +    L+TVT     D         D  + F+I  Q G I    
Sbjct: 570 FTHNEYNFYVPENLPRHGTVGLITVTDPDYGDNSAVTLSILDENDDFTIDSQTGVIRPNI 629

Query: 102 CLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYP----QYELFLPHI 154
             D E ++SY F V A D      ++SA V I+VV+VND  P F  P     YEL LP  
Sbjct: 630 SFDREKQESYTFYVKAEDGGRVSRSSSAKVTINVVDVNDNKPVFIVPPSNCSYELVLP-- 687

Query: 155 PLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-DSGHISIVDLSALNTS 210
                 PG+V+ +V A D D G    +    + G    +F+I+ ++G+I++++   +   
Sbjct: 688 ---STNPGTVVFQVIAVDNDTGMNAEVRYSIVGGNTRDLFAIDQETGNITLMEKCDVTDL 744

Query: 211 TIQLVVV-ATDTGNP 224
            +  V+V A D G P
Sbjct: 745 GLHRVLVKANDLGQP 759



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/114 (32%), Positives = 61/114 (53%), Gaps = 10/114 (8%)

Query: 76  RVKYWLSNDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNIS 131
           ++ Y L  D    FS+  R G +++++ LD E ED Y FT+ A D     +T++ TV +S
Sbjct: 500 KINYLLGPDAPPEFSLDCRTGMLTVVKKLDREKEDKYLFTILAKDNGVPPLTSNVTVFVS 559

Query: 132 VVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDR--VTLSL 183
           +++ ND  P F + +Y  ++P     +L     +G +   D D GD   VTLS+
Sbjct: 560 IIDQNDNSPVFTHNEYNFYVPE----NLPRHGTVGLITVTDPDYGDNSAVTLSI 609



 Score = 38.1 bits (87), Expect = 8.0,   Method: Compositional matrix adjust.
 Identities = 36/139 (25%), Positives = 67/139 (48%), Gaps = 15/139 (10%)

Query: 103 LDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADL 159
           LD E +D+Y   V   D      +++A + +SV + ND  P F+  + E+ +P     + 
Sbjct: 207 LDREEKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVFKETEIEVSIPE----NA 262

Query: 160 TPGSVIGKVEAADGDKGDRVTLS------LRGPYEKMFSIN-DSGHISIVD-LSALNTST 211
             G+ + ++ A D D G+   +       +     ++F +N  +G I+I + L    T  
Sbjct: 263 PVGTSVTQLHATDADIGENAKIHFSFSNLVSNIARRLFHLNATTGLITIKEPLDREETPN 322

Query: 212 IQLVVVATDTGNPPRQASV 230
            +L+V+A+D G  P +A V
Sbjct: 323 HKLLVLASDGGLMPARAMV 341


>gi|345486640|ref|XP_003425515.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin-15-like [Nasonia
           vitripennis]
          Length = 1618

 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 58/217 (26%), Positives = 101/217 (46%), Gaps = 13/217 (5%)

Query: 21  DNQDRYALATLIVSK-AGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKY 79
           DN  +Y+   + V+   G + R   F +  Y V   E   +N  + T+    P +  V Y
Sbjct: 618 DNGGKYSQTIVEVNVIPGPNTRSPVFQQQVYEVQVSEGASINSTVATIIAVDPENDPVSY 677

Query: 80  WL--SNDYGERFSIS-RQGDISLMQCLDYETEDSYRFTVYATDTL-MTTSATVNISVVNV 135
            +   ND   +F+I  + G I++++ LD E    Y+  + A DT  ++++ TVNI V ++
Sbjct: 678 SIVSGNDL-RQFAIGDKSGVITVIRKLDREDLTRYQLIIKAEDTGGLSSTCTVNIKVTDI 736

Query: 136 NDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSIN- 194
           ND +P F    YE  +       L     IG+V A D D+G    ++   P +  F+++ 
Sbjct: 737 NDKNPEFEGLPYEFSVKEGEARKL-----IGRVHAEDADEGINAEITYFAPDDIPFTVDP 791

Query: 195 DSGHI-SIVDLSALNTSTIQLVVVATDTGNPPRQASV 230
           ++G + + + L        + VV A D    PR A+ 
Sbjct: 792 ETGDVLTKLALDYEQNHEYKFVVTARDGAPDPRLATA 828



 Score = 47.0 bits (110), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 64/214 (29%), Positives = 98/214 (45%), Gaps = 21/214 (9%)

Query: 25   RYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLR-VKYWLSN 83
            R A AT+ V           F ++ Y  S  EN+P +Y++  V  + P   + V Y +  
Sbjct: 824  RLATATVTVRVIDVEDEVPIFHQSSYEASVKENVP-DYMVTHVMADDPDSKKQVTYVIKQ 882

Query: 84   DYGERFSIS-RQGDISLMQCLDYETEDSYRFTVYA---TDTLMTTSATVNISVVNVNDWD 139
               + FSI  + G I  ++ LDYETE  +   V     T +L   +  V I+V +VND  
Sbjct: 883  GDTDLFSIDPKTGIIKTIRGLDYETETQHILIVGTEENTSSLPGATTRVVINVQDVNDIP 942

Query: 140  PRFRYPQYELFLPH-IPLADLTP-GSVIGKVEAADGDK---GDRVTLSL--RGPYEKMFS 192
            P F        +P  + L D  P G+ +  + A D D    G++V   +  RG   K F 
Sbjct: 943  PVF------TMVPRPVTLDDNVPIGASVVNLIATDSDGTAPGNQVRYDVIGRGIAGKYFV 996

Query: 193  IN-DSGHISIV-DLSALNTSTIQLVVVATDTGNP 224
            I+ DSG + +  DL  +  +  Q+ V A D G+P
Sbjct: 997  IDPDSGVLRVRDDLRKVTDTEFQVDVRAYDMGDP 1030



 Score = 42.4 bits (98), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 43/152 (28%), Positives = 75/152 (49%), Gaps = 19/152 (12%)

Query: 43   LQFSKNEYSVSALENLPVNYVL--LTVTTNKPRD---LRVKYWLSNDYGE-RFSISRQGD 96
            L F+++ Y+V   E+ P   ++  L+V     RD   L  + +  N+    R +I+ + +
Sbjct: 1054 LGFAEDSYNVDVPEDAPAGTLIKVLSVINASSRDASLLDCEIYEGNEERLFRANITEEKN 1113

Query: 97   ISLM---QCLDYETEDSYRFTVY--ATDTLMTTS---ATVNISVVNVNDWDPRFRYPQYE 148
             +L      LD+E+ +SY+  +   A   L+ +      V I VV+VND  P F +PQ  
Sbjct: 1114 CALWLEKPELDFESTESYQIKIRLQAAAGLIKSGRNITMVKIQVVDVNDNKPEFMFPQAN 1173

Query: 149  L----FLPHIPLADLTPGSVIGKVEAADGDKG 176
            L    +  ++PLA     +V+ +V+A D D G
Sbjct: 1174 LTKDRYFANVPLAAHFDSTVL-EVKAHDKDNG 1204


>gi|195342415|ref|XP_002037796.1| GM18102 [Drosophila sechellia]
 gi|194132646|gb|EDW54214.1| GM18102 [Drosophila sechellia]
          Length = 3033

 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 63/212 (29%), Positives = 98/212 (46%), Gaps = 22/212 (10%)

Query: 45   FSKNEYSVSALENLPVN-YVLLTVTTNKPRDL--RVKYWLSNDYGERFSI-SRQGDISLM 100
            F    Y  +  ENLP   +VL    T+K   L  ++++ L  ++  RF I S  G+IS  
Sbjct: 2488 FELQSYHATVRENLPAGTHVLTPRATDKDEGLNAKLRFNLLGEHMHRFHIDSESGEISTA 2547

Query: 101  QCLDYETEDSYRFTVYATDTLMT----TSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
              LD E    Y FT+ A D+ +T    +S  + ISV +VND  P+F    Y + +P    
Sbjct: 2548 TTLDREETPVYHFTLMAQDSSITEPRASSVNLTISVSDVNDNIPKFDSTTYNVAVPE--- 2604

Query: 157  ADLTPGSVIGKVEAADGDKGDR--VTLSLRGPYEKMFSIN-DSGHISI-VDLSALNTS-- 210
              ++ G  +    A D D G+   V  ++ G  +  F IN  +G +S  ++L     S  
Sbjct: 2605 -RISKGEFVFGARALDLDDGENAVVHYTISGRDQHYFDINTKTGVVSTKLELKTKTKSSD 2663

Query: 211  --TIQLVVVATDTGNPP--RQASVPAIMHFPE 238
              T  +V+ A D G  P   +A +  I+  PE
Sbjct: 2664 DLTYTIVISAMDQGEQPLSSKAELTVILRPPE 2695



 Score = 51.6 bits (122), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 57/196 (29%), Positives = 88/196 (44%), Gaps = 18/196 (9%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDL---RVKYWLS-NDYGERFSISRQ-GDISL 99
            F   +YS S  EN  +  ++L V+     D    R++Y +   D    FSIS   G + +
Sbjct: 2275 FDPKQYSASVAENASIGAMVLQVSATDVDDGANGRIRYSIVLGDQNHDFSISEDTGVVRV 2334

Query: 100  MQCLDYETEDSYRFTVYATDTLMTT----SATVNISVVNVNDWDPRFRYPQYELFLPHIP 155
             + L+YE    Y  TV A D  +      +A + I+++++ND  P F    Y   L  + 
Sbjct: 2335 AKNLNYERLSRYSLTVRAEDCALENPAGDTAELTINILDINDNRPTFLDSPY---LARVM 2391

Query: 156  LADLTP-GSVIGKVEAADGDK---GDRVTLSLRGPYEKMFSIN-DSGHISIVD-LSALNT 209
               + P G  +  V A D D      +V   L+     +F IN  SG I+++  L     
Sbjct: 2392 ENTVPPNGGYVLTVNAYDADTPPLNSQVRYFLKEGDSDLFRINASSGDIALLKPLDREQQ 2451

Query: 210  STIQLVVVATDTGNPP 225
            S   L +VA DTG+PP
Sbjct: 2452 SEYTLTLVAMDTGSPP 2467



 Score = 47.8 bits (112), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 48/190 (25%), Positives = 83/190 (43%), Gaps = 15/190 (7%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTTNKPRDL-RVKYWLSNDYGERFSIS-RQGDISLMQ 101
            QF    +  +  E+L + + + T+  + P  L  V + L + +  +F +    G + L  
Sbjct: 1819 QFLDTPFVYNVSEDLQIGHTISTLRAHDPDTLGSVTFLLMDGHDGKFLLKPSTGKLILND 1878

Query: 102  CLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTP 161
             LD ET+  Y   +  +D +  T A   I V + ND  P F    Y   +P     +   
Sbjct: 1879 TLDRETKSKYELRIRVSDGVQYTEAYATIQVSDTNDNPPLFEDTVYSFDIPE----NAQR 1934

Query: 162  GSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-DSGHISIVDLSALNTSTIQ---L 214
            G  +G++ A D D G    LS   +      +FS+N  +G +++   + L+   +Q   L
Sbjct: 1935 GYQVGQIVAKDADLGQNAQLSYGVVSDWANDVFSLNPQTGMLTLT--ARLDYEEVQHYIL 1992

Query: 215  VVVATDTGNP 224
            +V A D G P
Sbjct: 1993 IVQAQDNGQP 2002



 Score = 46.6 bits (109), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 29/109 (26%), Positives = 51/109 (46%), Gaps = 4/109 (3%)

Query: 50   YSVSALENLPVNYVLLTVTTNK---PRDLRVKYWLSNDYGERFSISRQ-GDISLMQCLDY 105
            +S++  EN  +   ++ VT++      +    Y  S + GE+F I  Q G+I++   LD 
Sbjct: 2914 FSLNVTENAEIGSFVIRVTSSDLDLGANANASYSFSENPGEKFRIEPQSGNITVAGHLDR 2973

Query: 106  ETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHI 154
            E +D Y   V A+D        + I++ + ND  P F +  Y    P +
Sbjct: 2974 EQQDEYILKVVASDGAWRAETPITITIQDQNDDAPEFEHSFYSFSFPEL 3022



 Score = 40.0 bits (92), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 45/151 (29%), Positives = 67/151 (44%), Gaps = 12/151 (7%)

Query: 77   VKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVV 133
            V Y L ND+   F I+  G+I     LD E    Y F V A D     +T +A+V + ++
Sbjct: 2842 VIYRLQNDFDGTFEITESGEIYTRMRLDREEIGDYAFVVEAVDQGVPHLTGTASVLLHLL 2901

Query: 134  NVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSL---RGPYEKM 190
            + ND  P+F      LF  ++   +   GS + +V ++D D G     S      P EK 
Sbjct: 2902 DKNDNPPKFT----RLFSLNV-TENAEIGSFVIRVTSSDLDLGANANASYSFSENPGEKF 2956

Query: 191  FSINDSGHISIV-DLSALNTSTIQLVVVATD 220
                 SG+I++   L         L VVA+D
Sbjct: 2957 RIEPQSGNITVAGHLDREQQDEYILKVVASD 2987



 Score = 39.7 bits (91), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 73/165 (44%), Gaps = 20/165 (12%)

Query: 77  VKYWLSNDYGERFSISRQGDISLMQC---LDYETEDSYRFTVYATDT---LMTTSATVNI 130
           V+    N+ G  F +    D+ +++    LD E    Y  TV A D      TT+A + I
Sbjct: 424 VRIVSGNELG-HFRLEEAADLHIVRVNGVLDREEIGKYNLTVVAMDQGTPARTTTAHLII 482

Query: 131 SVVNVNDWDPRFRYPQYELFLPHIPLADLTP-GSVIGKVEAADGDKGDRVTLS---LRGP 186
            V +VND +P F   +Y        L++L P GS +  + A D D G    +    L G 
Sbjct: 483 DVNDVNDHEPVFEKSEYSAV-----LSELAPTGSFVASITATDEDTGVNAQVHYDILSGN 537

Query: 187 YEKMFSINDSGHISIVDLSALNTS---TIQLVVVATDTGNPPRQA 228
             K FS++    + IV    L+     T++L + A D G  P+ A
Sbjct: 538 ELKWFSMDPLTGL-IVTTGPLDREIRDTVELSISARDGGPNPKFA 581



 Score = 38.9 bits (89), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 41/168 (24%), Positives = 73/168 (43%), Gaps = 12/168 (7%)

Query: 76   RVKYWLSNDYGERFSISR-QGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNIS 131
            R+ Y L+N+  ++F I    G + L + +  E        + ATD     +++  ++++ 
Sbjct: 976  RISYSLTNNPNQQFRIGPVTGVLYLQRPIRAEPGTLIHVELMATDAGSPPLSSKLSLSVL 1035

Query: 132  VVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYE 188
            + +VND  P F +  YE  LP     +    +    + A D D G+   +S   + G  E
Sbjct: 1036 IADVNDHTPVFDHTSYETSLPETTKVN----TRFFALAATDIDLGENGRISYEIIEGNTE 1091

Query: 189  KMFSINDSGHISI-VDLSALNTSTIQLVVVATDTGNPPRQASVPAIMH 235
            +MF +   G + +   L         L V   D G P R + VP ++H
Sbjct: 1092 RMFGVFPDGFLFVRAPLDREERDYYALTVSCRDAGQPSRSSVVPVVIH 1139



 Score = 38.1 bits (87), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 61/233 (26%), Positives = 107/233 (45%), Gaps = 29/233 (12%)

Query: 44  QFSKNEYSVSALENLPVNYV--LLTVT-----TNKPRDLRVKYWLSNDYGERFSI-SRQG 95
           QFS+ E +V+  E+ P   +  L+T T     TN      +   +   Y  +F++ +  G
Sbjct: 598 QFSQREQNVTLGEDAPPQTIVALMTATDHDQGTNGSVTFALAPSVERLYPLQFALDALTG 657

Query: 96  DISLMQCLDYETEDSYRFTVYATD----TLMTTSATVNISVVNVNDWDPRFRYPQYELFL 151
            ++  + LD E    Y   V A D    T  + +ATV ++V +VND  P+F YP++ ++ 
Sbjct: 658 QLTTRRPLDREKMSRYEIPVIARDQGAPTPQSATATVWLNVADVNDNYPQF-YPRHYIYS 716

Query: 152 ----PHIPLA-DLTPGSVIGKVEAADGDKGDRVTLSLR--GPYEKMFSIN-DSGHISI-- 201
                 I L  ++    ++  V A+D D GD   +  R     E +F ++  SG IS+  
Sbjct: 717 LTDDDDIKLKEEVEKERILLHVTASDKDDGDNALIEYRLESGGEGLFQLDARSGAISLRG 776

Query: 202 -VDLSALNTSTIQLVVVATDTGNPPRQASVPAIMHFPEAIVQQASSKLNSGTS 253
              +S       +L++ A D G   R++   AI+   E +++  S  L  G +
Sbjct: 777 DAPVSMHWKPHYKLLISARDAGQ--RRSQHDAIV---EIVLKSKSEMLECGQA 824



 Score = 37.7 bits (86), Expect = 8.6,   Method: Compositional matrix adjust.
 Identities = 35/137 (25%), Positives = 59/137 (43%), Gaps = 4/137 (2%)

Query: 103  LDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPG 162
            LDYE    Y   + A D    +  +V +  +NV D +      +  ++   + L + +P 
Sbjct: 2765 LDYELTHLYEIWIEAVDGDTPSLRSVTLITLNVTDANDNAPVMEQLIYNAEV-LEEESPP 2823

Query: 163  SVIGKVEAADGDKGD--RVTLSLRGPYEKMFSINDSGHI-SIVDLSALNTSTIQLVVVAT 219
             +I  V+A+D D GD   V   L+  ++  F I +SG I + + L          VV A 
Sbjct: 2824 QLIAVVKASDRDSGDNGNVIYRLQNDFDGTFEITESGEIYTRMRLDREEIGDYAFVVEAV 2883

Query: 220  DTGNPPRQASVPAIMHF 236
            D G P    +   ++H 
Sbjct: 2884 DQGVPHLTGTASVLLHL 2900



 Score = 37.7 bits (86), Expect = 8.9,   Method: Compositional matrix adjust.
 Identities = 42/151 (27%), Positives = 67/151 (44%), Gaps = 26/151 (17%)

Query: 95  GDISLMQC-----LDYETEDSYRFTVYATDTLMTTS---ATVNISVVNVNDWDPRFRYPQ 146
           GD S +       LD E+  SY+  + A D           VN+++++VND  P F +  
Sbjct: 215 GDTSYLHLETTGNLDRESRGSYQLNISARDGGSPPRFGYLQVNVTILDVNDNPPIFDHSD 274

Query: 147 YELFLPHIPLADLTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSIN-DSGHISIVD 203
           Y + L    L    PG+ +  V A+D D GD  ++T  L    E  F++N ++G IS  +
Sbjct: 275 YNVSLNETAL----PGTPVVTVMASDNDLGDNSKITYYL-AETEHQFTVNPETGVISTTE 329

Query: 204 L----------SALNTSTIQLVVVATDTGNP 224
                      S+ +  +    V A D G+P
Sbjct: 330 RVNCPQQTNVKSSASQKSCVFTVFARDHGSP 360


>gi|15054521|gb|AAK82656.1|AF217288_1 protocadherin-S [Homo sapiens]
          Length = 1310

 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 63/195 (32%), Positives = 93/195 (47%), Gaps = 20/195 (10%)

Query: 45  FSKNEYSVSALENLPVNYV--LLTVTTNKPRDLRVKYWLSNDYGERFSISRQ-GDISLMQ 101
           F+ NEY+    ENLP +    L+TVT     D         D  + F+I  Q G I    
Sbjct: 570 FTHNEYNFYVPENLPRHGTVGLITVTDPDYGDNSAVTLSILDENDDFTIDSQTGVIRPNI 629

Query: 102 CLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYP----QYELFLPHI 154
             D E ++SY F V A D      ++SA V I+VV+VND  P F  P     YEL LP  
Sbjct: 630 SFDREKQESYTFYVKAEDGGRVSRSSSAKVTINVVDVNDNKPVFIVPPSNCSYELVLP-- 687

Query: 155 PLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-DSGHISIVDLSALNTS 210
                 PG+V+ +V A D D G    +    + G    +F+I+ ++G+I++++   +   
Sbjct: 688 ---STNPGTVVFQVIAVDNDTGMNAEVRYSIVGGNTRDLFAIDQETGNITLMEKCDVTDL 744

Query: 211 TIQLVVV-ATDTGNP 224
            +  V+V A D G P
Sbjct: 745 GLHRVLVKANDLGQP 759



 Score = 57.8 bits (138), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 37/114 (32%), Positives = 61/114 (53%), Gaps = 10/114 (8%)

Query: 76  RVKYWLSNDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNIS 131
           ++ Y L  D    FS+  R G +++++ LD E ED Y FT+ A D     +T++ TV +S
Sbjct: 500 KINYLLGPDAPPEFSLDCRTGMLTVVKKLDREKEDKYLFTILAKDNGVPPLTSNVTVFVS 559

Query: 132 VVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDR--VTLSL 183
           +++ ND  P F + +Y  ++P     +L     +G +   D D GD   VTLS+
Sbjct: 560 IIDQNDNSPVFTHNEYNFYVPE----NLPRHGTVGLITVTDPDYGDNSAVTLSI 609


>gi|297460978|ref|XP_002701391.1| PREDICTED: protocadherin-16 [Bos taurus]
          Length = 3296

 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 62/192 (32%), Positives = 95/192 (49%), Gaps = 23/192 (11%)

Query: 56  ENLPVNYVLLTVTTNKPRDLRVKYW-LSNDYGE-RFSISRQGDISLMQC----LDYETED 109
           E  P   ++  ++ + P D    +  +S + GE  F++S Q  +  + C    LD E  D
Sbjct: 375 EAAPPGQLVARISVSDPDDGDFAHVNVSLEGGEGHFALSTQDSVIYLVCVARRLDREERD 434

Query: 110 SYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLT-PGSVI 165
           +Y   V ATD+    +   A   + V +VND  P F     +L+ P  PL ++  PGS +
Sbjct: 435 AYNLRVTATDSGSPPLRAEAAFVLHVTDVNDNAPAF---DRQLYRPE-PLPEVALPGSFV 490

Query: 166 GKVEAADGDKG--DRVTLSLR-GPYEKMFSINDSGHISIVDLSALNTSTI----QLVVVA 218
            +V A D D+G   +VT SL  G + + FSI+ +    IV  +AL    +    QL+VVA
Sbjct: 491 ARVTARDPDQGTNGQVTYSLAPGAHTRWFSIDPTS--GIVTTAALLDYELEPQPQLIVVA 548

Query: 219 TDTGNPPRQASV 230
           TD G PP  +S 
Sbjct: 549 TDGGLPPLSSSA 560



 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 63/211 (29%), Positives = 91/211 (43%), Gaps = 20/211 (9%)

Query: 31   LIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDY-GERF 89
            ++V   GT      F    Y V           +L V    P    V Y L+ D  G  F
Sbjct: 984  VVVQDLGTRGLAPHFDSPTYRVDLPSGTTPGTQVLQVQARAPDGSPVTYHLAADGPGSPF 1043

Query: 90   SISRQ-GDISLMQCLDYETEDSYRFTVYATDT------LMTTSATVNISVVNVNDWDPRF 142
             +  Q G + +   LD+E ++ Y   V A           T +ATV IS++N ND  PR 
Sbjct: 1044 GLEPQSGWLWVRAALDHEAQELYTLKVMAVSGSKAELGQQTATATVRISILNQNDHSPRL 1103

Query: 143  -RYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYE--KMFSIN-DS 196
               P +     + P     PG+ +G+V A D D G   R+T SLR   E  K F I+  +
Sbjct: 1104 SEEPTFLAVAENQP-----PGTSVGRVFATDRDSGINGRLTYSLRQLSEDSKAFRIHPQT 1158

Query: 197  GHISIVD-LSALNTSTIQLVVVATDTGNPPR 226
            G ++ +  L     ++ QL+V   D G+PPR
Sbjct: 1159 GEVTTLQTLDRERQNSYQLLVQVQDAGSPPR 1189



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 64/199 (32%), Positives = 96/199 (48%), Gaps = 28/199 (14%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNK----PRDLRVKYWLSNDYGERFSI----SRQGD 96
            F++  Y V+  E+ PV   LL V  +     P  L V++ LS+  G+   +       GD
Sbjct: 2600 FTRAAYRVAVPEDTPVGAELLHVEASDADPGPHGL-VRFTLSS--GDPLGLFELDESSGD 2656

Query: 97   ISLMQCLDYETEDSYRFTVYATDT--LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHI 154
            + L + LD ET+  ++  V A+D   +    A V I V +VND  P F      L L   
Sbjct: 2657 LRLARPLDCETQARHQLVVQASDPAGVHFALAPVTIEVQDVNDHGPAF-----PLSLLST 2711

Query: 155  PLAD-LTPGSVIGKVEAADGDKG--DRVTLSL--RGPY---EKMFSINDS-GHI-SIVDL 204
             LA+   PG+++  + A DGD G   R+  SL   GP     + F++N S G + + V  
Sbjct: 2712 SLAENQPPGTLVTTLHAIDGDAGAFGRLHYSLLEAGPGPEGREAFALNSSTGELRARVAF 2771

Query: 205  SALNTSTIQLVVVATDTGN 223
               +T + QL+V ATD GN
Sbjct: 2772 DYEHTGSFQLLVGATDAGN 2790



 Score = 55.8 bits (133), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 73/261 (27%), Positives = 115/261 (44%), Gaps = 46/261 (17%)

Query: 11   ITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLT---- 66
            + +V+ A  +    R A AT+ V     +     F+   Y V+  E+LP    LLT    
Sbjct: 2446 VDVVLEARDHGVPVRAARATVHVQLQDQNDHAPSFTLPHYRVAVTEDLPPGSTLLTLEAT 2505

Query: 67   ---------------VTTNKPRDLRVKYWLSNDYGERFSISRQ--GDISLMQCLDYETED 109
                           V+ N+ R  +++  L+ + GE   +  +  G + L++ LD+E+  
Sbjct: 2506 DADGSRSHAAVDYSIVSGNRGRVFQLEPRLA-EAGESDGLGPRALGCLVLLEPLDFESLT 2564

Query: 110  SYRFTVYATDTLM---TTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIG 166
             Y  TV ATD      +++  V +SV++VND  P F    Y + +P     D   G+ + 
Sbjct: 2565 QYNLTVAATDRGQPPRSSAVPVTVSVLDVNDNPPVFTRAAYRVAVPE----DTPVGAELL 2620

Query: 167  KVEAADGDKGD----RVTLSLRGPYEKMFSIND-SGHISIV-DLSALNTSTIQLVVVATD 220
             VEA+D D G     R TLS   P   +F +++ SG + +   L     +  QLVV    
Sbjct: 2621 HVEASDADPGPHGLVRFTLSSGDPL-GLFELDESSGDLRLARPLDCETQARHQLVV---- 2675

Query: 221  TGNPPRQASVPAIMHFPEAIV 241
                  QAS PA +HF  A V
Sbjct: 2676 ------QASDPAGVHFALAPV 2690



 Score = 54.7 bits (130), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 58/198 (29%), Positives = 83/198 (41%), Gaps = 14/198 (7%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKP---RDLRVKYWLSNDYGERFSIS-RQGDISLM 100
            F    YSV   E+ P   +LL +  + P    + RV Y+L       F +    G++   
Sbjct: 1853 FPVPSYSVEVPEDAPAGTLLLQLQAHDPDAGANGRVTYYLGTGAAGAFLLEPSSGELRTA 1912

Query: 101  QCLDYETEDSYRFTVYATDTL----MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
              LD E   SY FTV A D+     ++T+  V I+V +VND  P F      L LP    
Sbjct: 1913 TTLDREQCPSYAFTVNAVDSAAAGPLSTTVPVTITVRDVNDHAPTFPTSPLRLRLPRPGP 1972

Query: 157  ADLTPGSVIGKVEAADGDKGDRVTLSLR-----GPYEKMFSINDSGHISIVDLSALNTST 211
               TP   +  + A D D G   ++  R      P   + S      +S   +S L+   
Sbjct: 1973 VFSTPILPLATLRAEDRDTGANASILYRLAGTPPPGTTVDSYTGEIRVSRSPVS-LSPRD 2031

Query: 212  IQLVVVATDTGNPPRQAS 229
              L +VATD G P R A+
Sbjct: 2032 RVLFIVATDLGRPARSAT 2049



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 69/252 (27%), Positives = 117/252 (46%), Gaps = 37/252 (14%)

Query: 14   VVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALEN------LPVNYVLLTV 67
            V  A+ ++ Q+ Y L  + VS +   L + Q +     +S L        L      L V
Sbjct: 1054 VRAALDHEAQELYTLKVMAVSGSKAELGQ-QTATATVRISILNQNDHSPRLSEEPTFLAV 1112

Query: 68   TTNKP------------RDL----RVKYWLS--NDYGERFSISRQ-GDISLMQCLDYETE 108
              N+P            RD     R+ Y L   ++  + F I  Q G+++ +Q LD E +
Sbjct: 1113 AENQPPGTSVGRVFATDRDSGINGRLTYSLRQLSEDSKAFRIHPQTGEVTTLQTLDRERQ 1172

Query: 109  DSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYEL--FLPHIPLAD-LTPG 162
            +SY+  V   D      +T+ TV+I+V+++ND  P F          LP I + D + PG
Sbjct: 1173 NSYQLLVQVQDAGSPPRSTTGTVHIAVLDLNDNSPTFLQASGAAGGGLP-IQVPDGVPPG 1231

Query: 163  SVIGKVEAADGDKGDRVTL--SLRGPYEKMFSIN-DSGH-ISIVDLSALNTSTIQLVVVA 218
            +++  ++A D D+G+  T+   L GP  ++FS++  SG  ++   L         L + A
Sbjct: 1232 TLVTTLQAKDPDEGENGTILYMLTGPGSELFSLHPHSGELLTAAPLIRAERPHYVLTLSA 1291

Query: 219  TDTGNPPRQASV 230
             D G+PPR +S+
Sbjct: 1292 HDQGSPPRSSSL 1303



 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 46/146 (31%), Positives = 65/146 (44%), Gaps = 7/146 (4%)

Query: 13   LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKP 72
            L V A  + +  R A   L VS A  +     F + EYSV   EN P    LLT+    P
Sbjct: 1615 LTVVASDHGSPPRSATQLLTVSVADVNDEAPAFQQQEYSVLLRENSPPGTSLLTLQATDP 1674

Query: 73   RDLRVKYWLSND--YGERFSISRQ-GDISLMQCLDYETEDSYRFTVYATD---TLMTTSA 126
             DL     ++     GE FS+    G ++ ++ LD E ++    TVYA D     + T  
Sbjct: 1675 -DLGANGQVTYGGISGENFSLDPDTGVLTTLRALDREEQEEINLTVYARDGGSPPLLTHV 1733

Query: 127  TVNISVVNVNDWDPRFRYPQYELFLP 152
            TV ++V + ND  P F      L +P
Sbjct: 1734 TVRVAVEDENDHAPTFGSAHLSLEVP 1759



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 48/149 (32%), Positives = 64/149 (42%), Gaps = 15/149 (10%)

Query: 89   FSISRQGD-ISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQY 147
            FS+ R G  +SL   LD+E  D Y   + A D      A + + V +VND  P F    Y
Sbjct: 2320 FSVGRYGGRLSLTGPLDFEQRDRYHLQLLAHDGPHEGQANLTVFVEDVNDNSPAFSQTLY 2379

Query: 148  E-LFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDSGH-----I 199
            + + L H P     PGS I  V A D D G    V+  L    E  FSI+ +       +
Sbjct: 2380 QVMLLEHTP-----PGSAILSVSATDRDSGANGHVSYHLASSAEG-FSIDPNNGTLFTTV 2433

Query: 200  SIVDLSALNTSTIQLVVVATDTGNPPRQA 228
              V L       + +V+ A D G P R A
Sbjct: 2434 GTVALGHEGPGMVDVVLEARDHGVPVRAA 2462



 Score = 45.8 bits (107), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 58/219 (26%), Positives = 87/219 (39%), Gaps = 39/219 (17%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDL----RVKYWLSNDYGERFSISRQGDISLM 100
            FS+  Y V  LE+ P    +L+V+    RD      V Y L++   E FSI         
Sbjct: 2374 FSQTLYQVMLLEHTPPGSAILSVSATD-RDSGANGHVSYHLASS-AEGFSIDPNNGTLFT 2431

Query: 101  Q----CLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
                  L +E        + A D    +    ATV++ + + ND  P F  P Y + +  
Sbjct: 2432 TVGTVALGHEGPGMVDVVLEARDHGVPVRAARATVHVQLQDQNDHAPSFTLPHYRVAV-- 2489

Query: 154  IPLADLTPGSVIGKVEAADGDKGDRVTLS-----LRGPYEKMFSIN----DSGHISIVDL 204
                DL PGS +  +EA D D G R   +     + G   ++F +     ++G    +  
Sbjct: 2490 --TEDLPPGSTLLTLEATDAD-GSRSHAAVDYSIVSGNRGRVFQLEPRLAEAGESDGLGP 2546

Query: 205  SALNT------------STIQLVVVATDTGNPPRQASVP 231
             AL              +   L V ATD G PPR ++VP
Sbjct: 2547 RALGCLVLLEPLDFESLTQYNLTVAATDRGQPPRSSAVP 2585



 Score = 43.9 bits (102), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 57/198 (28%), Positives = 86/198 (43%), Gaps = 21/198 (10%)

Query: 42  ELQFSKNEYSVSALENLPVNYVLLTVTT----NKPRDLRVKYWLSNDYGER----FSI-S 92
           E QF +  Y+ S  E        L VT     + P  L + Y L    G      F I +
Sbjct: 573 EPQFQRTFYNASLPEGTQPGTCFLQVTATDADSGPFGL-LSYSLGAGLGTSGSPPFRIDA 631

Query: 93  RQGDISLMQCLDY-ETEDSYRFTVYATDTLMTTSAT-VNISVVNVNDWDPRFRYPQYELF 150
             GD+   + LD  +   S+ FTV A D     S   V + V + ND  P+F   +Y   
Sbjct: 632 HSGDVCTTRTLDRDQGPSSFDFTVTAVDGGGLKSMVYVKVFVSDENDNPPQFYPREYAAS 691

Query: 151 LPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIND-SGHISIV-DLS 205
           L     A   PG+ + +V A D D+G    LS   L G    +F++++ SG +++   L+
Sbjct: 692 L----SAQSAPGTAVLRVRAHDPDQGPHGRLSYHILAGNSPPLFALDEHSGLLTVAWPLA 747

Query: 206 ALNTSTIQLVVVATDTGN 223
              +S +QL + A D G 
Sbjct: 748 RRASSMVQLEIGARDGGG 765



 Score = 43.9 bits (102), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 36/106 (33%), Positives = 53/106 (50%), Gaps = 9/106 (8%)

Query: 76  RVKYWLSNDYGER-FSIS-RQGDISLMQCLDYETEDSYRFTVYATD---TLMTTSATVNI 130
           +V Y L+     R FSI    G ++    LDYE E   +  V ATD     +++SATV++
Sbjct: 505 QVTYSLAPGAHTRWFSIDPTSGIVTTAALLDYELEPQPQLIVVATDGGLPPLSSSATVSV 564

Query: 131 SVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG 176
            + +VND +P+F+   Y   LP        PG+   +V A D D G
Sbjct: 565 VLQDVNDNEPQFQRTFYNASLPE----GTQPGTCFLQVTATDADSG 606



 Score = 41.2 bits (95), Expect = 0.78,   Method: Compositional matrix adjust.
 Identities = 27/94 (28%), Positives = 48/94 (51%), Gaps = 9/94 (9%)

Query: 95   GDISLMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFL 151
            G+   M+ LD E E +++  + A D     ++ +  V ++V++ ND  P F  P Y + +
Sbjct: 1803 GEFGTMRPLDREVEPAFQLQIEARDGGQPALSATLLVTVTVLDANDHAPAFPVPSYSVEV 1862

Query: 152  PHIPLADLTPGSVIGKVEAADGDKG--DRVTLSL 183
            P     D   G+++ +++A D D G   RVT  L
Sbjct: 1863 PE----DAPAGTLLLQLQAHDPDAGANGRVTYYL 1892



 Score = 39.7 bits (91), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 32/105 (30%), Positives = 51/105 (48%), Gaps = 8/105 (7%)

Query: 126 ATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSL 183
           A V + + +VND  P F  P+  + LP    +   PG++I  + A D D G   RVT +L
Sbjct: 876 ARVRVLLDDVNDNSPAFPAPEDTVLLP----SSTAPGTLIYTLRALDPDSGVNSRVTFTL 931

Query: 184 RGPYEKMFSIND-SGHISIVDLSALNTSTI-QLVVVATDTGNPPR 226
                  F+++  +GHI ++           +L + A D G+PPR
Sbjct: 932 LAGGGGTFTVDPTTGHIRLMGPLGPPGGPAHELELEARDGGSPPR 976



 Score = 38.9 bits (89), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 45/163 (27%), Positives = 70/163 (42%), Gaps = 22/163 (13%)

Query: 89  FSI-SRQGDISLMQCLDYETEDSYRFTVYATDTLMTT---SATVNISVVNVNDWDPRFRY 144
           FSI +  G + L + LD+E    +   V A D        SA V + V + ND  P    
Sbjct: 303 FSIDAHTGLLRLERPLDFEQRRVHELVVQARDGGAHPELGSAFVTVHVRDANDNQPSMTV 362

Query: 145 PQYELFL-----PHIPLADLTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSINDSG 197
               +FL     P +  A   PG ++ ++  +D D GD   V +SL G  E  F+++   
Sbjct: 363 ----IFLSADGSPRVSEA-APPGQLVARISVSDPDDGDFAHVNVSLEG-GEGHFALSTQD 416

Query: 198 HISIV-----DLSALNTSTIQLVVVATDTGNPPRQASVPAIMH 235
            +  +      L         L V ATD+G+PP +A    ++H
Sbjct: 417 SVIYLVCVARRLDREERDAYNLRVTATDSGSPPLRAEAAFVLH 459


>gi|148728175|ref|NP_444371.3| protocadherin beta 16 precursor [Mus musculus]
 gi|13876292|gb|AAK26066.1| protocadherin beta 16 [Mus musculus]
 gi|109733261|gb|AAI16626.1| Protocadherin beta 16 [Mus musculus]
 gi|148678208|gb|EDL10155.1| mCG141291 [Mus musculus]
          Length = 802

 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 48/148 (32%), Positives = 74/148 (50%), Gaps = 14/148 (9%)

Query: 95  GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFL 151
           G + +++ LDYE   ++ F V ATD     +++ A V + V++ ND  P   YP      
Sbjct: 512 GQLFVLRALDYEALQAFEFHVGATDGGSPALSSQALVRMVVLDDNDNAPFVLYPMQNASA 571

Query: 152 PH---IPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSI---NDSGHISIV 202
           P+   +P A   PG ++ KV A D D G    LS   L+     +FS+   N   H S +
Sbjct: 572 PYTELLPRA-AEPGYLVTKVVAVDRDSGQNAWLSFQLLKATEPGLFSVWAHNGEVHTSRL 630

Query: 203 DLSALNTSTIQLVVVATDTGNPPRQASV 230
            LS  +    +L+++  D G+PPR ASV
Sbjct: 631 -LSERDVHKHRLILLVKDNGDPPRSASV 657



 Score = 40.8 bits (94), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 29/107 (27%), Positives = 52/107 (48%), Gaps = 10/107 (9%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVK-------YWLSNDYGERFSIS-RQG 95
           QF +  Y     E+ P+ ++++TV+    +D+ V        + +S+D  + FSI    G
Sbjct: 242 QFEQLFYKAQIPEDSPIGFLIITVSATD-KDIGVNGQISYSLFQVSDDISKTFSIHPLTG 300

Query: 96  DISLMQCLDYETEDSYRFTVYATDT-LMTTSATVNISVVNVNDWDPR 141
           ++ L + LD+E   SY   + A D    +   T+   V++VND  P 
Sbjct: 301 EVRLKEHLDFEKTQSYEINIEARDAGTFSGKCTILAQVLDVNDHAPE 347


>gi|332265748|ref|XP_003281878.1| PREDICTED: protocadherin-11 X-linked-like [Nomascus leucogenys]
          Length = 1053

 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 76/274 (27%), Positives = 120/274 (43%), Gaps = 40/274 (14%)

Query: 45  FSKNEYSVSALENLPVNYV--LLTVTTNKPRDLRVKYWLSNDYGERFSISRQ-GDISLMQ 101
           F+ NEY+    ENLP +    L+TVT     D         D  + F+I  Q G I    
Sbjct: 599 FTHNEYNFYVPENLPRHGTVGLITVTDPDYGDNSAVTLSILDENDDFTIDSQTGVIRPNI 658

Query: 102 CLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYP----QYELFLPHI 154
             D E ++SY F V A D      ++SA V I+VV+VND  P F  P     YEL LP  
Sbjct: 659 SFDREKQESYTFYVKAEDGGRVSRSSSAKVTINVVDVNDNKPVFIVPPSNYSYELVLPST 718

Query: 155 PLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-DSGHISIVDLSALNTS 210
                 PG+V+ +V A D D G    +    + G    +F+I+ ++G+I++ +   +   
Sbjct: 719 -----NPGTVVFQVIAVDNDTGMNAEVRYSIVGGNTRDLFAIDQETGNITVTEKCDVTDL 773

Query: 211 TIQLVVV-ATDTGNPPRQASVPAIMHFPEAIVQQAS--------------------SKLN 249
            +  V+V A D G P    SV  +  F    +  A+                    + ++
Sbjct: 774 GLHRVLVKAHDLGQPDSLFSVVIVNLFVNESLTNATLINELVRKSTEAPVTPNTEIADVS 833

Query: 250 SGTSSTVLIILGVVLIVLGFVIILLILYIHKNKH 283
           S TS  V I++ VV   +  V+++ I  + + + 
Sbjct: 834 SPTSDYVKILVAVVAGTITVVVVIFITAVVRCRQ 867



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/114 (32%), Positives = 61/114 (53%), Gaps = 10/114 (8%)

Query: 76  RVKYWLSNDYGERFSISRQ-GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNIS 131
            + Y L  D    FS+ R+ G +++++ LD E ED Y FT+ A D     +T++ TV +S
Sbjct: 529 EINYLLGPDAPPEFSLDRRTGMLTVVKKLDREKEDKYLFTILAKDNGVPPLTSNVTVFVS 588

Query: 132 VVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDR--VTLSL 183
           +++ ND  P F + +Y  ++P     +L     +G +   D D GD   VTLS+
Sbjct: 589 IIDQNDNSPVFTHNEYNFYVPE----NLPRHGTVGLITVTDPDYGDNSAVTLSI 638



 Score = 38.1 bits (87), Expect = 7.6,   Method: Compositional matrix adjust.
 Identities = 36/139 (25%), Positives = 67/139 (48%), Gaps = 15/139 (10%)

Query: 103 LDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADL 159
           LD E +D+Y   V   D      +++A + +SV + ND  P F+  + E+ +P     + 
Sbjct: 236 LDREEKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVFKETEIEVSIPE----NA 291

Query: 160 TPGSVIGKVEAADGDKGDRVTLS------LRGPYEKMFSIN-DSGHISIVD-LSALNTST 211
             G+ + ++ A D D G+   +       +     ++F +N  +G I+I + L    T  
Sbjct: 292 PVGTSVTQLHATDADIGENAKIHFSFSNLVSNIARRLFHLNATTGLITIKEPLDREETPN 351

Query: 212 IQLVVVATDTGNPPRQASV 230
            +L+V+A+D G  P +A V
Sbjct: 352 HKLLVLASDGGLMPARAMV 370


>gi|269914099|ref|NP_001013028.2| protocadherin beta 16 precursor [Pan troglodytes]
          Length = 776

 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 56/210 (26%), Positives = 95/210 (45%), Gaps = 21/210 (10%)

Query: 95  GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFL 151
           G +  ++ LDYE   ++ F V ATD     +++ A V++ V++ ND  P   YP      
Sbjct: 511 GHLFALRSLDYEALQAFEFRVGATDRGSPALSSEAVVHVLVLDANDNSPFVLYPLQNGSA 570

Query: 152 PHIPLADLT--PGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSI-NDSGHISIVD-L 204
           P   L      PG ++ KV A DGD G    LS   L+     +F +   +G +     L
Sbjct: 571 PCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKATEPGLFGVWAHNGEVRTARLL 630

Query: 205 SALNTSTIQLVVVATDTGNPPRQASVPAIMHF--------PEAIVQQASSKLNSGTSSTV 256
           S  + +  +LVV+  D G PPR A+  A +H         P   + +A+       S TV
Sbjct: 631 SERDAAKHRLVVLVKDNGEPPRSAT--ATLHVLLVDGFSQPFLPLPEAAPGQTQANSLTV 688

Query: 257 LIILGVVLIVLGFVI-ILLILYIHKNKHTK 285
            +++ +  +   F+  +LL + +   + +K
Sbjct: 689 YLVVALASVSSLFLFSVLLFVAVQLCRRSK 718



 Score = 45.4 bits (106), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 47/150 (31%), Positives = 67/150 (44%), Gaps = 23/150 (15%)

Query: 101 QCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLA 157
           + LD E    Y  T+  TD     + T   + + + +VND  P F    Y LF+      
Sbjct: 407 RALDREARAEYNITLTVTDMGTPRLKTEHNITVQISDVNDNAPAFTQTSYTLFVRE---- 462

Query: 158 DLTPGSVIGKVEAADGDKGD--RVTLSLRGPYE------KMFSIN-DSGH---ISIVDLS 205
           + +P   IG V A D D G   +VT SL  P +       + SIN D+GH   +  +D  
Sbjct: 463 NNSPALHIGSVSATDRDSGTNAQVTYSLLPPQDPHLPLASLVSINADNGHLFALRSLDYE 522

Query: 206 ALNTSTIQLVVVATDTGNPPRQASVPAIMH 235
           AL     +  V ATD G+P    S  A++H
Sbjct: 523 ALQ--AFEFRVGATDRGSP--ALSSEAVVH 548



 Score = 42.0 bits (97), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 42/140 (30%), Positives = 69/140 (49%), Gaps = 20/140 (14%)

Query: 96  DISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLP 152
           ++ L + LD E E   R T+ A D      + +A V I VV++ND  P F  P Y++ +P
Sbjct: 193 ELMLDKELDREEEPQLRLTLTALDGGSPPRSGTAQVRIEVVDINDNAPEFEQPIYKVQIP 252

Query: 153 -HIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYE---KMFSIND-SGHISI---V 202
            + PL     GS++  V A D D G   +++ +L  P E   K   +N  +G + +   V
Sbjct: 253 ENSPL-----GSLVATVSARDLDGGANGKISYTLFQPSEDISKTLEVNPMTGEVRLRKQV 307

Query: 203 DLSALNTSTIQLVVVATDTG 222
           D   + +  ++  + ATD G
Sbjct: 308 DFEMVTSYEVR--IKATDGG 325



 Score = 38.1 bits (87), Expect = 7.1,   Method: Compositional matrix adjust.
 Identities = 39/145 (26%), Positives = 69/145 (47%), Gaps = 19/145 (13%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTTNKPRDL------RVKYWL---SNDYGERFSIS-R 93
           +F +  Y V   EN P+  ++ TV+    RDL      ++ Y L   S D  +   ++  
Sbjct: 241 EFEQPIYKVQIPENSPLGSLVATVSA---RDLDGGANGKISYTLFQPSEDISKTLEVNPM 297

Query: 94  QGDISLMQCLDYETEDSYRFTVYATD-TLMTTSATVNISVVNVNDWDPRFRYPQYELFLP 152
            G++ L + +D+E   SY   + ATD   ++   T+ + VV+VND +P    PQ  +   
Sbjct: 298 TGEVRLRKQVDFEMVTSYEVRIKATDGGGLSGKCTLLLQVVDVND-NP----PQLTMSAL 352

Query: 153 HIPLADLTPGSVIGKVEAADGDKGD 177
             P+ + +P  V+     +D D G+
Sbjct: 353 TSPIPENSPEIVVAVFSVSDPDSGN 377


>gi|75072044|sp|Q6X862.1|PC11X_GORGO RecName: Full=Protocadherin-11 X-linked; Short=Protocadherin-11;
           AltName: Full=Protocadherin on the X chromosome; Flags:
           Precursor
 gi|32330110|gb|AAP79576.1| protocadherinX precursor [Gorilla gorilla]
          Length = 1347

 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 63/195 (32%), Positives = 93/195 (47%), Gaps = 20/195 (10%)

Query: 45  FSKNEYSVSALENLPVNYV--LLTVTTNKPRDLRVKYWLSNDYGERFSISRQ-GDISLMQ 101
           F+ NEY+    ENLP +    L+TVT     D         D  + F+I  Q G I    
Sbjct: 570 FTHNEYNFYVPENLPRHGTVGLITVTDPDYGDNSAVTLSILDENDDFTIDSQTGVIRPNI 629

Query: 102 CLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYP----QYELFLPHI 154
             D E ++SY F V A D      ++SA V I+VV+VND  P F  P     YEL LP  
Sbjct: 630 SFDREKQESYTFYVKAEDGGRVSRSSSAKVTINVVDVNDNKPVFIVPPSNYSYELVLP-- 687

Query: 155 PLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-DSGHISIVDLSALNTS 210
                 PG+V+ +V A D D G    +    + G    +F+I+ ++G+I++++   +   
Sbjct: 688 ---STNPGTVVFQVIAVDNDTGMNAEVRYSIVGGNTRDLFAIDQETGNITLMEKCDVTDL 744

Query: 211 TIQLVVV-ATDTGNP 224
            +  V+V A D G P
Sbjct: 745 GLHRVLVKANDLGQP 759



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/114 (32%), Positives = 61/114 (53%), Gaps = 10/114 (8%)

Query: 76  RVKYWLSNDYGERFSISRQ-GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNIS 131
            + Y L  D    FS+ R+ G +++++ LD E ED Y FT+ A D     +T++ TV +S
Sbjct: 500 EINYLLGPDAPPEFSLDRRTGMLTVVKKLDREKEDKYLFTILAKDNGVPPLTSNVTVFVS 559

Query: 132 VVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDR--VTLSL 183
           +++ ND  P F + +Y  ++P     +L     +G +   D D GD   VTLS+
Sbjct: 560 IIDQNDNSPVFTHNEYNFYVPE----NLPRHGTVGLITVTDPDYGDNSAVTLSI 609



 Score = 38.1 bits (87), Expect = 7.9,   Method: Compositional matrix adjust.
 Identities = 36/139 (25%), Positives = 67/139 (48%), Gaps = 15/139 (10%)

Query: 103 LDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADL 159
           LD E +D+Y   V   D      +++A + +SV + ND  P F+  + E+ +P     + 
Sbjct: 207 LDREKKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVFKETEIEVSIPE----NA 262

Query: 160 TPGSVIGKVEAADGDKGDRVTLS------LRGPYEKMFSIN-DSGHISIVD-LSALNTST 211
             G+ + ++ A D D G+   +       +     ++F +N  +G I+I + L    T  
Sbjct: 263 PVGTSVTQLHATDADIGENAKIHFSFSNLVSNIARRLFHLNATTGLITIKEPLDREETPN 322

Query: 212 IQLVVVATDTGNPPRQASV 230
            +L+V+A+D G  P +A V
Sbjct: 323 HKLLVLASDGGLMPARAMV 341


>gi|270288725|ref|NP_001161832.1| protocadherin-11 X-linked isoform e precursor [Homo sapiens]
 gi|61814231|gb|AAX56122.1| protocadherin 11X isoform 8 [Homo sapiens]
          Length = 1339

 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 63/195 (32%), Positives = 93/195 (47%), Gaps = 20/195 (10%)

Query: 45  FSKNEYSVSALENLPVNYV--LLTVTTNKPRDLRVKYWLSNDYGERFSISRQ-GDISLMQ 101
           F+ NEY+    ENLP +    L+TVT     D         D  + F+I  Q G I    
Sbjct: 570 FTHNEYNFYVPENLPRHGTVGLITVTDPDYGDNSAVTLSILDENDDFTIDSQTGVIRPNI 629

Query: 102 CLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYP----QYELFLPHI 154
             D E ++SY F V A D      ++SA V I+VV+VND  P F  P     YEL LP  
Sbjct: 630 SFDREKQESYTFYVKAEDGGRVSRSSSAKVTINVVDVNDNKPVFIVPPSNCSYELVLP-- 687

Query: 155 PLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-DSGHISIVDLSALNTS 210
                 PG+V+ +V A D D G    +    + G    +F+I+ ++G+I++++   +   
Sbjct: 688 ---STNPGTVVFQVIAVDNDTGMNAEVRYSIVGGNTRDLFAIDQETGNITLMEKCDVTDL 744

Query: 211 TIQLVVV-ATDTGNP 224
            +  V+V A D G P
Sbjct: 745 GLHRVLVKANDLGQP 759



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/114 (32%), Positives = 61/114 (53%), Gaps = 10/114 (8%)

Query: 76  RVKYWLSNDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNIS 131
           ++ Y L  D    FS+  R G +++++ LD E ED Y FT+ A D     +T++ TV +S
Sbjct: 500 KINYLLGPDAPPEFSLDCRTGMLTVVKKLDREKEDKYLFTILAKDNGVPPLTSNVTVFVS 559

Query: 132 VVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDR--VTLSL 183
           +++ ND  P F + +Y  ++P     +L     +G +   D D GD   VTLS+
Sbjct: 560 IIDQNDNSPVFTHNEYNFYVPE----NLPRHGTVGLITVTDPDYGDNSAVTLSI 609



 Score = 38.1 bits (87), Expect = 7.7,   Method: Compositional matrix adjust.
 Identities = 36/139 (25%), Positives = 67/139 (48%), Gaps = 15/139 (10%)

Query: 103 LDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADL 159
           LD E +D+Y   V   D      +++A + +SV + ND  P F+  + E+ +P     + 
Sbjct: 207 LDREEKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVFKETEIEVSIPE----NA 262

Query: 160 TPGSVIGKVEAADGDKGDRVTLS------LRGPYEKMFSIN-DSGHISIVD-LSALNTST 211
             G+ + ++ A D D G+   +       +     ++F +N  +G I+I + L    T  
Sbjct: 263 PVGTSVTQLHATDADIGENAKIHFSFSNLVSNIARRLFHLNATTGLITIKEPLDREETPN 322

Query: 212 IQLVVVATDTGNPPRQASV 230
            +L+V+A+D G  P +A V
Sbjct: 323 HKLLVLASDGGLMPARAMV 341


>gi|47229646|emb|CAG06842.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 2982

 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 65/229 (28%), Positives = 105/229 (45%), Gaps = 24/229 (10%)

Query: 15  VRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTT---NK 71
           V A+ +    R A+ATL ++ + T+     F + +Y  +  ENL + Y +LTV     + 
Sbjct: 239 VTAVDHGAPRRTAMATLTITVSDTNDHNPVFEQQDYKENIRENLEIGYEVLTVRATDGDA 298

Query: 72  PRDLRVKYWLSNDYGER--FSI-SRQGDISLMQCLDYETEDSYRFTVYATDTL-----MT 123
           P +  + Y + N  G    F I SR G I     +D E  ++Y   V A D        +
Sbjct: 299 PVNGNILYRIINGNGSNDVFEIDSRSGVIRTRGLVDREQVEAYMLLVEANDQGRDPGPRS 358

Query: 124 TSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS- 182
            +ATV+I V + ND  P+F   +Y + +P     D+ P + I +V A D D+G    +  
Sbjct: 359 ATATVHIVVEDDNDNAPQFSEKRYVVQVPE----DMAPNTEILQVTATDEDRGSNAVVHF 414

Query: 183 --LRGPYEKMFSIN-DSGHISIV---DLSALNTSTIQLVVVATDTGNPP 225
             + G     F I+  +G + +V   D  A    T++  + A D G PP
Sbjct: 415 SIMSGNTRGQFYIDAQTGKMDLVSHLDYEANKEYTLR--IRAQDGGRPP 461



 Score = 46.6 bits (109), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 47/170 (27%), Positives = 81/170 (47%), Gaps = 13/170 (7%)

Query: 45  FSKNEYSVSALENLPVNYVLL---TVTTNKPRDLRVKYWLSNDYGE-RFSISRQ-GDISL 99
           F    +  + LEN+P+ Y ++    V  +   + R++Y L++      F+I+   G I +
Sbjct: 483 FVSTPFQATVLENVPLGYSIIHIQAVDADSGDNSRLEYRLTSTTPNFPFAINNSTGWIVV 542

Query: 100 MQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
              LD E+ D Y F V A D    +M++SA+++++V++VND +P F    Y + L     
Sbjct: 543 AAELDRESVDFYNFGVEARDQGYPVMSSSASISMTVLDVNDNNPEFTQKAYYMRLNE--- 599

Query: 157 ADLTPGSVIGKVEAADGDKGDRVTLSL-RGPYEKMFSINDSGHISIVDLS 205
            D   G+ +  V A D D    VT  +  G     FSI       ++ L+
Sbjct: 600 -DAAVGTSVLTVSAVDQDINSVVTYQISSGNTRNRFSITSQSGGGLITLA 648



 Score = 45.4 bits (106), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 49/193 (25%), Positives = 89/193 (46%), Gaps = 22/193 (11%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKP---RDLRVKYWL-SNDYGERFSIS-RQGDISL 99
            F K+E  +   EN P+  V+  V+   P    + ++ Y +   +  E F +    G+++ 
Sbjct: 899  FEKDELDIMVEENSPIGLVVGHVSATDPDEGSNAQIMYQIVEGNIPEVFQLDIFSGELTS 958

Query: 100  MQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADL 159
            +  LDYET + Y   V AT   + + ATV+I +V+ ND  P  +   +++   +      
Sbjct: 959  LIDLDYETRNEYVIVVQATSAPLVSRATVHIKLVDKNDNVPVLK--NFQIIFNNYVTNKY 1016

Query: 160  T--PGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSGHISIVDLSALNTSTIQLVVV 217
            +  P  VIG++ A D D  D++  S        F + +      ++L  LN ST ++ + 
Sbjct: 1017 SSFPSGVIGRIPAHDPDVSDQLHYS--------FEVGNE-----LNLVLLNQSTGEIQLS 1063

Query: 218  ATDTGNPPRQASV 230
                 N P +AS+
Sbjct: 1064 QALDNNRPLEASM 1076



 Score = 45.1 bits (105), Expect = 0.065,   Method: Compositional matrix adjust.
 Identities = 50/191 (26%), Positives = 91/191 (47%), Gaps = 12/191 (6%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTT-NKPRDLRVKYWLSN-DYGERFSISRQ---GDIS 98
           +F++  Y +   E+  V   +LTV+  ++  +  V Y +S+ +   RFSI+ Q   G I+
Sbjct: 587 EFTQKAYYMRLNEDAAVGTSVLTVSAVDQDINSVVTYQISSGNTRNRFSITSQSGGGLIT 646

Query: 99  LMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLAD 158
           L   LDY+ E  Y  T+ A+D  +  +A V ++V + N   P F+   Y + +      D
Sbjct: 647 LALPLDYKLERQYVLTITASDGTLFDTAKVFVNVTDANTHRPVFQSSHYTVNINE----D 702

Query: 159 LTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSINDSGHISI-VDLSALNTSTIQLV 215
              G+ +  + A D D G+  R+T  +     +     DSG ++  ++L   +  +  L 
Sbjct: 703 RPMGTTVVLISATDEDTGENARITYFMDDSIPQFDIDPDSGAVTTQMELDYEDQVSYTLA 762

Query: 216 VVATDTGNPPR 226
           + A D G P +
Sbjct: 763 ITARDNGIPQK 773



 Score = 39.3 bits (90), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 53/189 (28%), Positives = 85/189 (44%), Gaps = 22/189 (11%)

Query: 63  VLLTVTTNKPRDLRVKYWLSNDYGER----FSIS-RQGDISLMQCLDYETEDSYRFTVYA 117
           VL  V  ++    R++Y++   +  R    F++    G +S ++ LD ET+D++ F V A
Sbjct: 182 VLKAVDADEGEAGRLEYFIEALFDSRSNSLFAVDPANGAVSTVEVLDRETKDTHVFRVTA 241

Query: 118 TD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGD 174
            D      T  AT+ I+V + ND +P F    Y+  +      +L  G  +  V A DGD
Sbjct: 242 VDHGAPRRTAMATLTITVSDTNDHNPVFEQQDYKENI----RENLEIGYEVLTVRATDGD 297

Query: 175 ---KGDRVTLSLRG-PYEKMFSIND-SGHI---SIVDLSALNTSTIQLVVVATDTGNPPR 226
               G+ +   + G     +F I+  SG I    +VD   +      L+V A D G  P 
Sbjct: 298 APVNGNILYRIINGNGSNDVFEIDSRSGVIRTRGLVDREQV--EAYMLLVEANDQGRDPG 355

Query: 227 QASVPAIMH 235
             S  A +H
Sbjct: 356 PRSATATVH 364


>gi|332234714|ref|XP_003266550.1| PREDICTED: protocadherin beta-2 isoform 1 [Nomascus leucogenys]
          Length = 797

 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 48/151 (31%), Positives = 71/151 (47%), Gaps = 12/151 (7%)

Query: 95  GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFL 151
           G +  +Q LDYE   ++ F V ATD     +++ A V + V++ ND  P   YP      
Sbjct: 512 GHLFALQSLDYEALQAFEFLVGATDRGSPALSSEALVRVLVLDANDNSPFVLYPLQNSSA 571

Query: 152 PHIPLAD--LTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSI-NDSGHISIVD-L 204
           P   L      PG ++ KV A DGD G    LS   L+     +F +   +G +     L
Sbjct: 572 PCTELVPRVAEPGYLVTKVVAVDGDSGQNAWLSYQLLKATEPGLFGVWAHNGEVRTARLL 631

Query: 205 SALNTSTIQLVVVATDTGNPPRQASVPAIMH 235
           S  + +  +LVV+  D G PPR A+  A +H
Sbjct: 632 SERDVAKHRLVVLVKDNGEPPRSAT--ATLH 660



 Score = 46.2 bits (108), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 45/138 (32%), Positives = 63/138 (45%), Gaps = 21/138 (15%)

Query: 102 CLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLAD 158
            LD ET   Y  T+  TD     +     + + V +VND  P F    Y LF+      +
Sbjct: 409 ALDRETRSEYNITITVTDLGTPRLKIEHNITVLVSDVNDNAPAFTQTSYTLFVRE----N 464

Query: 159 LTPGSVIGKVEAADGDKGD--RVTLSLRGPYE------KMFSIN-DSGH---ISIVDLSA 206
            +P   IG V+A D D G   +VT SL  P +       + SIN D+GH   +  +D  A
Sbjct: 465 NSPALHIGSVKATDRDSGTNAQVTYSLLPPQDLHLPLASLVSINADNGHLFALQSLDYEA 524

Query: 207 LNTSTIQLVVVATDTGNP 224
           L     + +V ATD G+P
Sbjct: 525 LQ--AFEFLVGATDRGSP 540


>gi|26331732|dbj|BAC29596.1| unnamed protein product [Mus musculus]
          Length = 802

 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 48/148 (32%), Positives = 74/148 (50%), Gaps = 14/148 (9%)

Query: 95  GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFL 151
           G + +++ LDYE   ++ F V ATD     +++ A V + V++ ND  P   YP      
Sbjct: 512 GQLFVLRALDYEALQAFEFHVGATDGGSPALSSQALVRMVVLDDNDNAPFVLYPMQNASA 571

Query: 152 PH---IPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSI---NDSGHISIV 202
           P+   +P A   PG ++ KV A D D G    LS   L+     +FS+   N   H S +
Sbjct: 572 PYTELLPRA-AEPGYLVTKVVAVDRDSGQNAWLSFQLLKATEPGLFSVWAHNGEVHTSRL 630

Query: 203 DLSALNTSTIQLVVVATDTGNPPRQASV 230
            LS  +    +L+++  D G+PPR ASV
Sbjct: 631 -LSERDVHKHRLILLVKDNGDPPRSASV 657



 Score = 38.1 bits (87), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 28/107 (26%), Positives = 51/107 (47%), Gaps = 10/107 (9%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVK-------YWLSNDYGERFSIS-RQG 95
           QF +  Y     E+ P+ ++++TV+    +D+ V        + +S+   + FSI    G
Sbjct: 242 QFEQLFYKAQIPEDSPIGFLIITVSATD-KDIGVNGQISYSLFQVSDGISKTFSIHPLTG 300

Query: 96  DISLMQCLDYETEDSYRFTVYATDT-LMTTSATVNISVVNVNDWDPR 141
           ++ L + LD+E   SY   + A D    +   T+   V++VND  P 
Sbjct: 301 EVRLKEHLDFEKTQSYEINIEARDAGTFSGKCTILAQVLDVNDHAPE 347


>gi|18087761|ref|NP_291066.1| protocadherin gamma-A5 precursor [Mus musculus]
 gi|13876336|gb|AAK26088.1| protocadherin gamma A5 [Mus musculus]
 gi|34785777|gb|AAH57404.1| Protocadherin gamma subfamily A, 5 [Mus musculus]
 gi|148678193|gb|EDL10140.1| mCG133388, isoform CRA_w [Mus musculus]
          Length = 932

 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 61/197 (30%), Positives = 88/197 (44%), Gaps = 23/197 (11%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVT-TNKPRDLRVKYWLS-----NDYGERFSI-SRQGDI 97
           F+++EY VS  EN PV   LLT+T T+    +  K   S     +   E F + S  G+I
Sbjct: 242 FTQSEYRVSVPENTPVGTRLLTLTATDADEGINAKLTFSFRNEEDKISETFQLDSNLGEI 301

Query: 98  SLMQCLDYETEDSYRFTVYATD-TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
           S +Q LDYE    Y   V A D   +  SA V ++V +VND  P       E+ L  +  
Sbjct: 302 STIQSLDYEESRFYLMEVVAQDGGALLASAKVLVTVQDVNDNAP-------EVILTSLTS 354

Query: 157 A---DLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDS--GHISIVDLSALN--- 208
           +   D  PG++I      D D G+   +S   P    F +  S   +  ++   AL+   
Sbjct: 355 SVSEDCLPGTIIALFSVHDADSGENGEISCSIPKNLPFKLEKSVDNYYHLLTTRALDREE 414

Query: 209 TSTIQLVVVATDTGNPP 225
           TS   + V   D G PP
Sbjct: 415 TSDYNITVTVVDRGTPP 431



 Score = 42.4 bits (98), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 57/214 (26%), Positives = 94/214 (43%), Gaps = 35/214 (16%)

Query: 45  FSKNEYSVSALENLPVNYVLLTV---TTNKPRDLRVKYWLSNDYGERFSISR-------Q 94
           FS+  YS S  EN P    + +V     +   + +V Y L+ +  +   +S         
Sbjct: 452 FSRPFYSTSISENNPRGVSIFSVYAYDADSGDNAQVTYSLAENTFQEVPVSSYVSINSDT 511

Query: 95  GDISLMQCLDYETEDSYRFTVYATDTL---MTTSATVNISVVNVNDWDPRFRYPQYELFL 151
           G +  +Q  DYE     +  V A D+    ++++ ++++ V++ ND  P   YP     +
Sbjct: 512 GVLYALQSFDYEHLRDLQLLVTAKDSGTPPLSSNVSMSLFVLDQNDNIPEILYPT----I 567

Query: 152 P-----HIPLADLT--PGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-DSGHI- 199
           P      + LA  +  PG ++ KV A D D G    LS   L+     +FSI   +G + 
Sbjct: 568 PTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYRLLKASEPGLFSIGLHTGEVC 627

Query: 200 ---SIVDLSALNTSTIQLVVVATDTGNPPRQASV 230
              +++D   L  S   LVV   D G PP  A+V
Sbjct: 628 TARALLDRDVLKQS---LVVAVQDHGQPPLSATV 658



 Score = 39.3 bits (90), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 43/144 (29%), Positives = 65/144 (45%), Gaps = 19/144 (13%)

Query: 101 QCLDYETEDSYRFTVYATDTL---MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLA 157
           + LD E    Y  TV   D     ++T   +++ V ++ND  P F  P Y        ++
Sbjct: 408 RALDREETSDYNITVTVVDRGTPPLSTENHISLKVADINDNPPTFSRPFYS-----TSIS 462

Query: 158 DLTP-GSVIGKVEAADGDKGD--RVTLSLRG------PYEKMFSIN-DSGHI-SIVDLSA 206
           +  P G  I  V A D D GD  +VT SL        P     SIN D+G + ++     
Sbjct: 463 ENNPRGVSIFSVYAYDADSGDNAQVTYSLAENTFQEVPVSSYVSINSDTGVLYALQSFDY 522

Query: 207 LNTSTIQLVVVATDTGNPPRQASV 230
            +   +QL+V A D+G PP  ++V
Sbjct: 523 EHLRDLQLLVTAKDSGTPPLSSNV 546


>gi|324499643|gb|ADY39852.1| Protein dachsous [Ascaris suum]
          Length = 2824

 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 66/210 (31%), Positives = 103/210 (49%), Gaps = 18/210 (8%)

Query: 32   IVSKAGTSLRELQFSKNEYSVSAL------ENLPVNYVLLTVT-TNKPRDLRVKYWLSND 84
            +V +    +R L  + N  S+ +L      E+ P+  ++ +VT T+   D  ++Y L N 
Sbjct: 1937 VVPETAVRIRVLNVNDNVPSLPSLRPRKISESAPIGTLVASVTATDVDIDTHLEYSL-NP 1995

Query: 85   YGERFSISR-QGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFR 143
              + FSI+R  G I L+  LDYET   +R  +   D    + +T+ ISV++ ND  PRF 
Sbjct: 1996 ASQLFSINRFSGAIHLIGNLDYETAREHRLNIEVMDGENISKSTLIISVIDENDNKPRFD 2055

Query: 144  YPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSIN-DSGHISI 201
               Y++    I   D+T GSV+ K+ A D D G    L        ++F I+ ++G + +
Sbjct: 2056 KHFYDV----IVTKDITIGSVVMKMTARDADSGLAGKLHYNFSTSNQLFKIDSENGFVKV 2111

Query: 202  VDLSALNTSTIQ-LVVVATDTGNPPRQASV 230
               S L   TI  L V A D G P   A+V
Sbjct: 2112 --KSQLPAGTIHYLKVQAFDHGVPQLSAAV 2139



 Score = 55.8 bits (133), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 62/226 (27%), Positives = 105/226 (46%), Gaps = 16/226 (7%)

Query: 13   LVVRAIQYDNQDRYALATLIVSKA-GTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNK 71
            L V+A  +      A  TL VS A  T   +  FSK  YS S  E+     V+ TV  + 
Sbjct: 2123 LKVQAFDHGVPQLSAAVTLRVSVAIATDNIQPHFSKKSYSFSIPEDTLPYVVIGTVHASN 2182

Query: 72   PRDLRVKYWL-SNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYAT--DTLMTTSATV 128
              + +  Y +   D      I++ GD+ L + LD+E   S +F V A+  ++    +  V
Sbjct: 2183 DDEGKFDYRIIGADDMFWAGINQNGDVFLKRQLDHERNHSLKFAVEASSPNSFANATTVV 2242

Query: 129  NISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRG 185
            ++ +++VND  P+F     ++ +       +  G++I K+ A+D D GD   L+   L G
Sbjct: 2243 HVQILDVNDNSPQFYINTNKVVIDE----HMKRGTLISKISASDRDSGDNGRLTYKILSG 2298

Query: 186  PYEKMFSIND-SGHISIVDLSA----LNTSTIQLVVVATDTGNPPR 226
               +MF ++  SG + +   +     L+     L++ A D GNP R
Sbjct: 2299 NDHQMFRLDPFSGALFLDQWNERGLLLSEPINDLLIAAIDAGNPIR 2344



 Score = 48.1 bits (113), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 50/194 (25%), Positives = 92/194 (47%), Gaps = 16/194 (8%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGERFSISRQGDISLMQ 101
            F    Y V   E++     +L V     +  R+ ++ +  + +  E     R G + +  
Sbjct: 948  FEMQLYGVEVAEDIAPMTEILAVKAKDIDSERNAKITFRFAEEIPEFGIHPRSGSVFVKM 1007

Query: 102  CLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLAD 158
             LD E +  Y  T+ ATD+    ++++AT++I+++++ND       P     LP + L+D
Sbjct: 1008 ALDREIQADYHLTLIATDSGKPSLSSNATLHINILDIND-----NSPNCSSVLP-LTLSD 1061

Query: 159  LTP-GSVIGKVEAADGDKGDRVTLSLRGPYEK-MFSINDSGHISIV-DLSALNTST-IQL 214
             TP     G + A D D+G   T++ R   E   F++  +G +S+   +S L  +   +L
Sbjct: 1062 DTPLNESFGTISAIDLDEGTNGTVTYRLQNEDPNFALKSNGEVSLKRKISQLALAKEYRL 1121

Query: 215  VVVATDTGNPPRQA 228
             V+A+D G   R A
Sbjct: 1122 AVIASDGGVDARSA 1135



 Score = 47.4 bits (111), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 57/225 (25%), Positives = 99/225 (44%), Gaps = 18/225 (8%)

Query: 9    QPIT-LVVRAIQYDNQDRYALA--TLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLL 65
            +PI  L++ AI   N  R+     ++I+++   S     F    Y  S  EN+ +  V+L
Sbjct: 2327 EPINDLLIAAIDAGNPIRWNWTRISVIINRELWSGTAPFFPLQSYQKSVQENIAIGSVIL 2386

Query: 66   TVTTNKPRDLRVKYW--LSNDYGERFSISRQ-GDISLMQCLDYETEDSYRFTVYATDTLM 122
                     +    W     D  E F+ +R  GDI L+  LD+ET ++Y F++   D   
Sbjct: 2387 KSRAVNRVGIDETGWEYTMKDNDEVFTCNRSTGDILLVDALDFETRNTYEFSLIVKDRNE 2446

Query: 123  TTSAT-VNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG--DRV 179
             ++   ++I+V+ V+++ P F    Y   +P         G  +G V A D D G    V
Sbjct: 2447 RSAIVPISINVLGVDEYPPVFMKSSYTFQIP----TSAQVGQRVGVVIATDRDSGVDGVV 2502

Query: 180  TLSLRGPYEKMFSIN-DSGHI----SIVDLSALNTSTIQLVVVAT 219
               + G   +  +I+ DSG I     + +    N +  + VV+A+
Sbjct: 2503 RYEIEGDALRYLAIDPDSGQIVLTKELTETMKTNVTFDEFVVIAS 2547



 Score = 43.9 bits (102), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 44/139 (31%), Positives = 67/139 (48%), Gaps = 12/139 (8%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTT--NKPRDLRVKYWLSND--YGERFSISRQ-GDISL 99
           FSK  Y VS  E+      LL V+   N   + ++ Y + +     + F+I  Q G I +
Sbjct: 541 FSKPLYEVSVKEDAEPGTCLLKVSASNNCGANAKIHYSIRDQPIIRKLFNIDDQWGTICV 600

Query: 100 MQCLDYETEDSYRFTVYATDTLMTTS-ATVNISVVNVNDWDPRFRYPQYELFLPHIPLAD 158
            + LDYE    Y+ TV A D+   +  A VN+ V +VND  P F    Y     ++ + +
Sbjct: 601 EEALDYEKTTKYQLTVLAHDSSGHSGIALVNVHVEDVNDNSPIFYPANY-----NVSVKE 655

Query: 159 LTP-GSVIGKVEAADGDKG 176
            TP GS +  + A D D+G
Sbjct: 656 DTPIGSPVLVLSANDADQG 674



 Score = 39.7 bits (91), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 37/136 (27%), Positives = 64/136 (47%), Gaps = 10/136 (7%)

Query: 95   GDISLMQCLDYETEDSYRFTVYATDTLM---TTSATVNISVVNVNDWDPRFRYPQYELFL 151
            G+++L   LDYE    +   + A D  +   + + TV ++V++VND  P F    Y + +
Sbjct: 898  GELALSAALDYEVTRRFNLVIKARDQGIPPRSNNITVTLNVIDVNDNAPIFEMQLYGVEV 957

Query: 152  PHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYE-KMFSIN-DSGHISI-VDLSALN 208
                  D+ P + I  V+A D D      ++ R   E   F I+  SG + + + L    
Sbjct: 958  AE----DIAPMTEILAVKAKDIDSERNAKITFRFAEEIPEFGIHPRSGSVFVKMALDREI 1013

Query: 209  TSTIQLVVVATDTGNP 224
             +   L ++ATD+G P
Sbjct: 1014 QADYHLTLIATDSGKP 1029



 Score = 38.1 bits (87), Expect = 7.7,   Method: Compositional matrix adjust.
 Identities = 52/196 (26%), Positives = 88/196 (44%), Gaps = 16/196 (8%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGERFSIS-RQGDISLMQC 102
           QF+ N Y+ +A E++     +  V  + P  +    + S D    F+I    G I + + 
Sbjct: 744 QFTSNLYTFAAAEDVLPGIAVGQVEASGPFPISYTIY-SGDPDHLFTIEPTTGKIIVSRY 802

Query: 103 LDYETEDSYRFTVYATDTLMTTSAT-VNISVVNVNDWDPRFRYPQYELFLPHIPLADLTP 161
           LD +   S    + A     +T+ T V I + + ND +PRF   + E ++P     D  P
Sbjct: 803 LDADKWGSILLNIQAWMEGGSTNHTQVVIELTDANDNEPRFEMERVEAYVPE----DQPP 858

Query: 162 GSVIGKVEAADGDKGD--RVTLSL--RGPYEKMFSINDSGHISIVDLSALN---TSTIQL 214
                 V+A+D D+G    +T SL    P   +     +G +++   +AL+   T    L
Sbjct: 859 HVPFFAVQASDKDRGQNGEITYSLVHSEPPCPITVRPLTGELALS--AALDYEVTRRFNL 916

Query: 215 VVVATDTGNPPRQASV 230
           V+ A D G PPR  ++
Sbjct: 917 VIKARDQGIPPRSNNI 932


>gi|297710482|ref|XP_002831909.1| PREDICTED: protocadherin-11 X-linked-like, partial [Pongo abelii]
          Length = 845

 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 63/195 (32%), Positives = 93/195 (47%), Gaps = 20/195 (10%)

Query: 45  FSKNEYSVSALENLPVNYV--LLTVTTNKPRDLRVKYWLSNDYGERFSISRQ-GDISLMQ 101
           F+ NEY+    ENLP +    L+TVT     D         D  + F+I  Q G I    
Sbjct: 390 FTHNEYNFYVPENLPRHGTVGLITVTDPDYGDNSAVTLSILDENDDFTIDSQTGVIRPNI 449

Query: 102 CLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYP----QYELFLPHI 154
             D E ++SY F V A D      ++SA V I+VV+VND  P F  P     YEL LP  
Sbjct: 450 SFDREKQESYTFYVKAEDGGRVSRSSSAKVTINVVDVNDNKPVFIVPPSNYSYELVLPST 509

Query: 155 PLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-DSGHISIVDLSALNTS 210
                 PG+V+ +V A D D G    +    + G    +F+I+ ++G+I++++   +   
Sbjct: 510 -----NPGTVVFQVIAVDNDTGMNAEVRYSIVGGNTRDLFAIDQETGNITLMEKCDVTDL 564

Query: 211 TIQLVVV-ATDTGNP 224
            +  V+V A D G P
Sbjct: 565 GLHRVLVKANDLGQP 579



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/114 (32%), Positives = 61/114 (53%), Gaps = 10/114 (8%)

Query: 76  RVKYWLSNDYGERFSISRQ-GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNIS 131
            + Y L  D    FS+ R+ G +++++ LD E ED Y FT+ A D     +T++ TV +S
Sbjct: 320 EINYLLGPDAPPEFSLDRRTGMLTVVKKLDREKEDKYLFTILAKDNGVPPLTSNVTVFVS 379

Query: 132 VVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDR--VTLSL 183
           +++ ND  P F + +Y  ++P     +L     +G +   D D GD   VTLS+
Sbjct: 380 IIDQNDNSPVFTHNEYNFYVPE----NLPRHGTVGLITVTDPDYGDNSAVTLSI 429



 Score = 37.7 bits (86), Expect = 9.8,   Method: Compositional matrix adjust.
 Identities = 37/140 (26%), Positives = 69/140 (49%), Gaps = 17/140 (12%)

Query: 103 LDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLP-HIPLAD 158
           LD E +D+Y   V   D      +++A + +SV + ND  P F+  + E+ +P + P+  
Sbjct: 27  LDREEKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVFKETEIEVSIPENAPV-- 84

Query: 159 LTPGSVIGKVEAADGDKGDRVTLS------LRGPYEKMFSIN-DSGHISIVD-LSALNTS 210
              G+ + ++ A D D G+   +       +     ++F +N  +G I+I + L    T 
Sbjct: 85  ---GTSVTQLHATDADIGENAKIHFSFSNLVSNIARRLFHLNATTGLITIKEPLDREETP 141

Query: 211 TIQLVVVATDTGNPPRQASV 230
             +L+V+A+D G  P +A V
Sbjct: 142 NHKLLVLASDGGLMPARAMV 161


>gi|296193016|ref|XP_002744324.1| PREDICTED: protocadherin gamma-A5 [Callithrix jacchus]
          Length = 813

 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 62/209 (29%), Positives = 95/209 (45%), Gaps = 27/209 (12%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWLSND---YGERFSI-SRQGDI 97
           F+++EYSVS  EN+PV   LLT+T   P +    ++ +   N+     E F + S  G+I
Sbjct: 242 FTQSEYSVSVPENIPVGTRLLTLTATDPDEGINGKLTFSFRNEEDKISETFQLDSNLGEI 301

Query: 98  SLMQCLDYETEDSYRFTVYATD-TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
           S +Q LDYE    Y   V A D   +  SA V ++V +VND  P       E+ L  +  
Sbjct: 302 STIQSLDYEESRFYFMEVVAQDGGALLASAKVLVTVQDVNDNAP-------EVILTSLTS 354

Query: 157 A---DLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMF----SINDSGH-ISIVDLSALN 208
           +   D  PG+VI      D D G+   ++   P    F    S+++  H ++   L    
Sbjct: 355 SLSEDCPPGTVIALFSVHDDDYGENGEIACSIPRNLPFKLEKSVDNYYHLLTTRHLDREE 414

Query: 209 TSTIQLVVVATDTGNPPRQASVPAIMHFP 237
           TS   + +   D G PP    +  + H P
Sbjct: 415 TSDYNITLTVIDHGTPP----LSTVNHIP 439



 Score = 48.9 bits (115), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 71/285 (24%), Positives = 121/285 (42%), Gaps = 48/285 (16%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPR---DLRVKYWLSNDYGERFSISR-------Q 94
           F +  YS S  EN P    + +V  + P    + R+ Y L+ D  +   +S         
Sbjct: 452 FLQTSYSTSLPENNPRGVSIFSVMAHDPDSGDNARITYSLAEDTFQGVPLSSYVSINSDT 511

Query: 95  GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFL 151
           G +  ++  DYE     +  V A+D     ++++ ++ + V++ ND  P   YP     L
Sbjct: 512 GVLYALRSFDYEQLRELQLWVTASDNGNPPLSSNVSLILFVLDQNDNTPEILYPA----L 567

Query: 152 P-----HIPLADLT--PGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-DSGHI- 199
           P      + LA  +  PG ++ KV A D D G    LS   L+     +F++   +G + 
Sbjct: 568 PTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYRLLKASEPGLFTVGLHTGEVR 627

Query: 200 ---SIVDLSALNTSTIQLVVVATDTGNPPRQASVPAIM----HFPEAIVQQASSKLNSGT 252
              +++D  +L  S   LVV   D G PP  ++V   M      P+ +    S K ++  
Sbjct: 628 TARALLDRDSLKQS---LVVAVEDHGQPPLSSTVTLTMAVADRIPDILDDLGSIKTSTDP 684

Query: 253 SSTVLII------LGVVLIVLGFVIILLILYI---HKNKHTKNNG 288
               L          V  + L FVI+LL+L +   HK++  +  G
Sbjct: 685 EDLDLTFYLVVAVAAVSCVFLAFVIVLLVLRLRRWHKSRLLQAEG 729



 Score = 42.4 bits (98), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 47/145 (32%), Positives = 62/145 (42%), Gaps = 17/145 (11%)

Query: 103 LDYETEDSYRFTVYATDTLMTTSATVN---ISVVNVNDWDPRFRYPQYELFLPHIPLADL 159
           LD E    Y  T+   D      +TVN   + V +VND  P F    Y   LP     + 
Sbjct: 410 LDREETSDYNITLTVIDHGTPPLSTVNHIPLKVADVNDNPPNFLQTSYSTSLPE----NN 465

Query: 160 TPGSVIGKVEAADGDKGD--RVTLSLRG------PYEKMFSIN-DSGHI-SIVDLSALNT 209
             G  I  V A D D GD  R+T SL        P     SIN D+G + ++        
Sbjct: 466 PRGVSIFSVMAHDPDSGDNARITYSLAEDTFQGVPLSSYVSINSDTGVLYALRSFDYEQL 525

Query: 210 STIQLVVVATDTGNPPRQASVPAIM 234
             +QL V A+D GNPP  ++V  I+
Sbjct: 526 RELQLWVTASDNGNPPLSSNVSLIL 550


>gi|14589922|ref|NP_116751.1| protocadherin-11 X-linked isoform d precursor [Homo sapiens]
 gi|13161066|gb|AAK13471.1|AF332219_1 protocadherin 11 [Homo sapiens]
 gi|189442394|gb|AAI67817.1| Protocadherin 11 X-linked [synthetic construct]
          Length = 1337

 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 63/195 (32%), Positives = 93/195 (47%), Gaps = 20/195 (10%)

Query: 45  FSKNEYSVSALENLPVNYV--LLTVTTNKPRDLRVKYWLSNDYGERFSISRQ-GDISLMQ 101
           F+ NEY+    ENLP +    L+TVT     D         D  + F+I  Q G I    
Sbjct: 570 FTHNEYNFYVPENLPRHGTVGLITVTDPDYGDNSAVTLSILDENDDFTIDSQTGVIRPNI 629

Query: 102 CLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYP----QYELFLPHI 154
             D E ++SY F V A D      ++SA V I+VV+VND  P F  P     YEL LP  
Sbjct: 630 SFDREKQESYTFYVKAEDGGRVSRSSSAKVTINVVDVNDNKPVFIVPPSNCSYELVLP-- 687

Query: 155 PLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-DSGHISIVDLSALNTS 210
                 PG+V+ +V A D D G    +    + G    +F+I+ ++G+I++++   +   
Sbjct: 688 ---STNPGTVVFQVIAVDNDTGMNAEVRYSIVGGNTRDLFAIDQETGNITLMEKCDVTDL 744

Query: 211 TIQLVVV-ATDTGNP 224
            +  V+V A D G P
Sbjct: 745 GLHRVLVKANDLGQP 759



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/114 (32%), Positives = 61/114 (53%), Gaps = 10/114 (8%)

Query: 76  RVKYWLSNDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNIS 131
           ++ Y L  D    FS+  R G +++++ LD E ED Y FT+ A D     +T++ TV +S
Sbjct: 500 KINYLLGPDAPPEFSLDCRTGMLTVVKKLDREKEDKYLFTILAKDNGVPPLTSNVTVFVS 559

Query: 132 VVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDR--VTLSL 183
           +++ ND  P F + +Y  ++P     +L     +G +   D D GD   VTLS+
Sbjct: 560 IIDQNDNSPVFTHNEYNFYVPE----NLPRHGTVGLITVTDPDYGDNSAVTLSI 609



 Score = 38.1 bits (87), Expect = 8.1,   Method: Compositional matrix adjust.
 Identities = 36/139 (25%), Positives = 67/139 (48%), Gaps = 15/139 (10%)

Query: 103 LDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADL 159
           LD E +D+Y   V   D      +++A + +SV + ND  P F+  + E+ +P     + 
Sbjct: 207 LDREEKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVFKETEIEVSIPE----NA 262

Query: 160 TPGSVIGKVEAADGDKGDRVTLS------LRGPYEKMFSIN-DSGHISIVD-LSALNTST 211
             G+ + ++ A D D G+   +       +     ++F +N  +G I+I + L    T  
Sbjct: 263 PVGTSVTQLHATDADIGENAKIHFSFSNLVSNIARRLFHLNATTGLITIKEPLDREETPN 322

Query: 212 IQLVVVATDTGNPPRQASV 230
            +L+V+A+D G  P +A V
Sbjct: 323 HKLLVLASDGGLMPARAMV 341


>gi|327270371|ref|XP_003219963.1| PREDICTED: protocadherin gamma-B1-like [Anolis carolinensis]
          Length = 804

 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 66/259 (25%), Positives = 112/259 (43%), Gaps = 29/259 (11%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKP---RDLRVKYWLSNDYGERFSIS-------RQ 94
           F K+ YS+   EN P    + T+    P    + R+ Y + N   ++  IS         
Sbjct: 441 FEKSSYSIYVTENNPSGTSIFTIKAFDPDVGSNARITYSILNSNIQKLPISSYISINSET 500

Query: 95  GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFL 151
           G I   +  DYE    ++  V A D     ++++AT+ + +++ ND  PR  YP  E   
Sbjct: 501 GTIYAQRSFDYEEFREFQLQVKAQDGGSPPLSSNATLRVFILDQNDNTPRILYPSPEA-- 558

Query: 152 PHIPLADLTPGS-----VIGKVEAADGDKGDRVTLS---LRGPYEKMFSI-NDSGHISIV 202
               L ++ P S     ++ KV A D D G    LS   ++     +F+I + +G I   
Sbjct: 559 KSSVLFEMVPRSAEEDYLVTKVVAVDADSGHNAWLSYHLIQATEPGLFTIGSHTGEIRTS 618

Query: 203 DLSALNTSTIQ-LVVVATDTGNPPRQASVPAIM----HFPEAIVQQASSKLNSGTSSTVL 257
                  S  Q LVVV  D G PP  A+V   +    +F EA+ +  +   +  T   + 
Sbjct: 619 RAFVERDSVKQRLVVVVKDNGQPPLSATVTLNLVFAENFQEALPEMKNQTRDLETQDDLQ 678

Query: 258 IILGVVLIVLGFVIILLIL 276
             L + L ++ F+ +L ++
Sbjct: 679 FYLVLALALISFLFLLAVI 697



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 57/227 (25%), Positives = 96/227 (42%), Gaps = 12/227 (5%)

Query: 9   QPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVT 68
           Q I L++ AI      +     + ++    +     FS+  Y VS  EN+PV  ++L V 
Sbjct: 196 QTIHLILEAIDGGEPRKTGTVQIWINVTDANDNPPTFSQEVYKVSLRENVPVGTLVLQVA 255

Query: 69  T---NKPRDLRVKYWLSNDYGE--RFSIS-RQGDISLMQCLDYETEDSYRFTVYATD-TL 121
               ++  + R+ Y  +N + +  +F +    G I+LM  LD+E +  Y  TV A D   
Sbjct: 256 ASDNDEGTNARITYHFTNMHQQQKKFEVDPSNGKITLMDTLDFEEDKEYIMTVAAKDGGG 315

Query: 122 MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTL 181
           + T   V I +V+ ND  P          +P    +D+    +  KV   D D   +VT 
Sbjct: 316 LATHCKVQIQIVDENDNPPEVTLVSLFSPVPENSESDILIALI--KVNDKDQDDNGKVTC 373

Query: 182 SLRGPYEKMFSINDSGHISIVDLSALNTSTI---QLVVVATDTGNPP 225
            L          + + +  ++    L+  T     + + ATD GNPP
Sbjct: 374 YLGNDLPFKIRPSSNNYYKLLADHPLDRETAPKYNITITATDKGNPP 420


>gi|301621394|ref|XP_002940040.1| PREDICTED: hypothetical protein LOC100489805 [Xenopus (Silurana)
            tropicalis]
          Length = 5636

 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 64/242 (26%), Positives = 111/242 (45%), Gaps = 30/242 (12%)

Query: 76   RVKYWLSNDYGERFSIS-------RQGDISLMQCLDYETEDSYRFTVYATD---TLMTTS 125
            ++ Y + N   E +S+S         G +   +  DYE    ++  VYA D     ++ +
Sbjct: 2150 KIIYSIYNTDTEDYSMSSFFSINIETGVLYAQRSFDYEQHKEFQIKVYAKDYGSPSLSCN 2209

Query: 126  ATVNISVVNVNDWDPRFRYPQYELF---LPHIPLADLTPGSVIGKVEAADGDKGDRVTLS 182
            A++ I + + ND  P+  YP  E        +P+A    G++I KV A D D G    LS
Sbjct: 2210 ASLTIRITDQNDNVPKILYPSSESVDSSFEMVPVAS-EQGALITKVVAVDADSGHNAWLS 2268

Query: 183  ---LRGPYEKMFSIN-DSGHIS----IVDLSALNTSTIQLVVVATDTGNPPRQASVPAIM 234
               ++G    +FSI+ ++G I       D   L     +LVV+  D G P   A+V   +
Sbjct: 2269 YHVVQGSEPSLFSISQNTGEIRTSRVFQDKDILKH---KLVVMVKDNGAPSLSATVTLSL 2325

Query: 235  ----HFPEAIVQQASSKLNSGTSSTVLIILGVVLIVLGFVIILLILYIHKNKHTKNNGPP 290
                HF + + +  +   ++ TSS + I L V L ++  + IL ++ +  +K  K + PP
Sbjct: 2326 IVADHFLQVVPKLNNQLSDADTSSNLQIYLVVALALISLLFILTVMLVVISK-CKESSPP 2384

Query: 291  GS 292
             +
Sbjct: 2385 SA 2386



 Score = 58.5 bits (140), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 67/249 (26%), Positives = 111/249 (44%), Gaps = 44/249 (17%)

Query: 76   RVKYWLSNDYGERFSIS-------RQGDISLMQCLDYETEDSYRFTVYATD---TLMTTS 125
            +V Y + N   E +S+S         G +   +  DYE    ++  VYA D     ++ +
Sbjct: 1339 KVIYSIYNTDTEDYSMSSFFSINIETGVLYAQRSFDYEQHKEFQIKVYAKDYGSPSLSCN 1398

Query: 126  ATVNISVVNVNDWDPRFRYPQYELF---LPHIPLADLTPGSVIGKVEAADGDKGDRVTLS 182
            A++ I + + ND  P+  YP  E        +P+A    G++I KV A D D G    LS
Sbjct: 1399 ASLTIRITDQNDNVPKILYPSSESVDSSFEMVPVAS-EQGALITKVVAVDADSGHNAWLS 1457

Query: 183  ---LRGPYEKMFSIN-DSGHIS----IVDLSALNTSTIQLVVVATDTGNPPRQASVPAIM 234
               ++G    +FSI+ ++G I       D   L     +LVV+  D G P   A+V   +
Sbjct: 1458 YHVVQGSEPSLFSISQNTGEIRTSRVFQDKDILKH---KLVVMVKDNGVPSLSATVTLSL 1514

Query: 235  ----HFPEAIVQQASSKLNSGTSST-------VLIILGVVLIVLGFVIILLILYIHKNKH 283
                HF     QQ   KLN+  S         + +++ + LI L F++ ++++ I K   
Sbjct: 1515 IVADHF-----QQVVPKLNNQLSDADSPSNLQIYLVVALALISLLFILTVMLVVISK--- 1566

Query: 284  TKNNGPPGS 292
             K + PP +
Sbjct: 1567 CKESSPPSA 1575



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 62/238 (26%), Positives = 111/238 (46%), Gaps = 32/238 (13%)

Query: 76   RVKYWLSNDYGERFSIS-------RQGDISLMQCLDYETEDSYRFTVYATDT---LMTTS 125
            ++ Y +SN   E F++S         G +   +  DYE    ++  V A D     ++++
Sbjct: 2965 KIIYSISNINTEDFAVSPYFSINIETGVLYAQRSFDYEQHKEFQMQVSAKDNGSPTLSSN 3024

Query: 126  ATVNISVVNVNDWDPRFRYPQYEL----FLPHIPLADLTPGSVIGKVEAADGDKGDRVTL 181
            AT+ I +++ ND  P+  YP  E     F   +P      GS+I KV A D D G    L
Sbjct: 3025 ATLIIHIIDQNDNAPKILYPSTESGGSPFFEMVPFVS-EQGSLITKVIAVDADSGHNSWL 3083

Query: 182  S---LRGPYEKMFSINDSGHISIVDLSAL----NTSTIQLVVVATDTGNPPRQASVPAIM 234
            S   ++      FSI  S H   +  S +    +    ++V++  D G+P   A+V   +
Sbjct: 3084 SYHFIQMSEPSPFSI--SQHTGEIRSSRIFQEKDILKHKVVIMVKDNGDPSLSATVTLSI 3141

Query: 235  ----HFPEAIVQQASSKLNSGTSST---VLIILGVVLIVLGFVIILLILYIHKNKHTK 285
                HF + +V Q +++LN    ++   + +++ + LI L F+I + ++ I K K +K
Sbjct: 3142 YVGDHF-QQVVPQLNNQLNDTEPTSNMQIYLVIALGLICLLFIITVGLVIISKWKESK 3198



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 59/213 (27%), Positives = 96/213 (45%), Gaps = 21/213 (9%)

Query: 27   ALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWL-- 81
            A+  +IV+ A  +L    F+K  Y VS  EN+P+N  +L V     ++  + ++ Y    
Sbjct: 3478 AIIRIIVTDANDNLP--VFTKAVYKVSISENIPINSSVLHVNATDRDEGTNAQITYSFIK 3535

Query: 82   --SND-YGERFSISR-QGDISLMQCLDYETEDSYRFTVYATD-TLMTTSATVNISVVNVN 136
               ND +   FSI++  G+I  +Q LD+E   +Y  +V ATD       + V + ++N N
Sbjct: 3536 TSENDIHSPMFSINQINGEIKTLQKLDFELTRNYEMSVQATDGGGFVAHSKVLLEIINEN 3595

Query: 137  DWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSIN 194
            D  P          +P     D  PG+VI  ++  D D G+       L G         
Sbjct: 3596 DNAPEITMTSVSTPIPE----DSEPGTVIALIKVHDHDSGENGEAECHLLGSPPFQLVST 3651

Query: 195  DSGHISIVDLSALNTSTIQL---VVVATDTGNP 224
             S +  I+  S L+   +QL    ++A D G+P
Sbjct: 3652 SSSYYRIITTSVLDREKVQLYNITILANDKGSP 3684



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 57/213 (26%), Positives = 102/213 (47%), Gaps = 21/213 (9%)

Query: 27   ALATLIVSKAGTSLRELQFSKNEYSVSALENLPVN--YVLLTVT-TNKPRDLRVKYWLS- 82
            AL  +IV+ +  +L    F++  Y VS  EN P+N   ++LT T  ++  + ++ Y +S 
Sbjct: 2703 ALIRIIVTDSNDNLP--VFTQEVYKVSISENAPINSSVIILTATDKDEGTNAQITYSISK 2760

Query: 83   ----NDYGERFSISR-QGDISLMQCLDYETEDSYRFTVYATD-TLMTTSATVNISVVNVN 136
                N Y   F+I+   G+I++   L++E  + Y  +V A D   +   + V I +++ N
Sbjct: 2761 TSENNFYTSVFNINPVMGEITIKGSLNFEATEHYEMSVQAEDGGGLVAQSKVLIEIIDEN 2820

Query: 137  DWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSIN 194
            D  P          +P     D  PG++I  +E  D D G+  +V   + GP       +
Sbjct: 2821 DNAPEISISSLSTPIPE----DSAPGTLIALIEVHDQDSGENGQVDCQIIGPSPFQLLSS 2876

Query: 195  DSGHISIVDLSALNTSTI---QLVVVATDTGNP 224
             S +  IV+  AL+   +    + ++ATD G+P
Sbjct: 2877 SSRYYKIVNTGALDRELVPWYNITILATDRGSP 2909



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 65/241 (26%), Positives = 115/241 (47%), Gaps = 38/241 (15%)

Query: 76   RVKYWLSNDYGERFSISRQGDISL-------MQCLDYETEDSYRFTVYATDT---LMTTS 125
            +V Y +SN   E F +S    I++        +  DYE +  +   + A D     ++++
Sbjct: 5271 KVIYSISNTNTEDFPVSSYFSINIETGVLYAQRSFDYEQDKEFHMHIAAKDNGSPSLSSN 5330

Query: 126  ATVNISVVNVNDWDPRFRYPQYEL----FLPHIPLADLTPGSVIGKVEAADGDKGDRVTL 181
             TV I +++ ND  P+  YP  E         +P A +  GS+I KV A D D G    L
Sbjct: 5331 TTVIIRIMDQNDNAPKMLYPSIESGDSSLFEMVPFASVE-GSLITKVVAVDADSGHNSWL 5389

Query: 182  S---LRGPYEKMFSIND-SGHIS----IVDLSALNTSTIQLVVVATDTGNPPRQASVPAI 233
            S   ++      FSIN  +G I     + +  ALN    +++V+  D G+P    SV A 
Sbjct: 5390 SYHFIQITESSPFSINQHTGEIRTSRVLQEKDALNH---KVIVMIKDNGHP--TLSVTAT 5444

Query: 234  M------HFPEAIVQQASSKL---NSGTSSTVLIILGVVLIVLGFVIILLILYIHKNKHT 284
            +      HF + +V Q +++    +S ++  + +++ + LI L F++ +L++ I K K +
Sbjct: 5445 INLVVADHF-QQLVPQLNNEFTPDDSPSNLQMYLVIALALISLLFILTVLLVAISKCKES 5503

Query: 285  K 285
            K
Sbjct: 5504 K 5504



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 56/197 (28%), Positives = 89/197 (45%), Gaps = 23/197 (11%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSND-----YGERFSIS-RQG 95
            F++  Y VS  EN P+N  +L V     ++  + ++ Y  S       +   FSI+   G
Sbjct: 4669 FTQEVYKVSISENTPINSTVLRVNASDMDEGTNAQITYSFSRTSENSLHASMFSINPTSG 4728

Query: 96   DISLMQCLDYETEDSYRFTVYATD-TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHI 154
            +I     L+YE +  Y  +V A D       + V I + + ND  P        LF P I
Sbjct: 4729 EIKTNNLLNYEAKKDYEISVQAKDGGGFVAHSKVLIEITDENDNAPEISITS--LFTP-I 4785

Query: 155  PLADLTPGSVIGKVEAADGDKGDRVTLSLR----GPYEKMFSINDSGHISIVDLSALN-- 208
            P  D TPG+VI  +E  D D      +  +     P++ + S +D  +  I+  SAL+  
Sbjct: 4786 P-EDTTPGTVIALIEVHDQDSEQNAEVDCQILGSAPFQ-LVSSSDRFY-RIITSSALDRE 4842

Query: 209  -TSTIQLVVVATDTGNP 224
              S   + ++ATD G+P
Sbjct: 4843 KASWYNITILATDRGSP 4859



 Score = 48.5 bits (114), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 55/197 (27%), Positives = 90/197 (45%), Gaps = 23/197 (11%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSND-----YGERFSIS-RQG 95
            F++  Y VS  EN P+N  +L V     ++  + ++ Y  S       +   FSI+   G
Sbjct: 5025 FTQEVYKVSISENTPINSTVLRVNASDMDEGTNAQITYSFSRTSVNSLHASMFSINPTSG 5084

Query: 96   DISLMQCLDYETEDSYRFTVYATD-TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHI 154
            +I+    L++E +  Y  +V A D       + V I + + ND  P        LF P I
Sbjct: 5085 EITTNNLLNFEAKKDYEISVQAKDGGGFVAHSKVLIEITDENDNAPEISITS--LFTP-I 5141

Query: 155  PLADLTPGSVIGKVEAADGDKGDRVTLSLR----GPYEKMFSINDSGHISIVDLSALN-- 208
            P  D TPG+VI  +E  D D      +  +     P++ + S +D  +  I+  SAL+  
Sbjct: 5142 P-EDTTPGTVIALIEVHDQDSEQNAEVDCQILGSAPFQ-LVSSSDRFY-RIITSSALDRE 5198

Query: 209  -TSTIQLVVVATDTGNP 224
              S   + ++ATD G+P
Sbjct: 5199 KASWYNITILATDRGSP 5215



 Score = 48.1 bits (113), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 56/205 (27%), Positives = 94/205 (45%), Gaps = 29/205 (14%)

Query: 45   FSKNEYSVSALEN-LP--VNYVLLTVTTNKPRDLRVKYWLSNDYGERFSISRQGDISL-- 99
            F K+ Y++   EN LP    Y +  +  +   + +V Y +SN   E F +S    I++  
Sbjct: 4161 FIKSAYTIYLPENNLPGATIYRIHALDLDMGDNAKVIYSISNTNTEDFPVSSYFSINIET 4220

Query: 100  -----MQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYE--- 148
                  +  DYE +  +   + A D     ++++ T+ I +++ ND  P+  YP  E   
Sbjct: 4221 GVLYAQRSFDYEQDKEFHMHIAAKDNGSPSLSSNTTLIIRIMDQNDNAPKILYPSTESGD 4280

Query: 149  -LFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIND-SGHIS--- 200
             L    +P A +  GS+I KV A D D G    LS   ++      FSIN  +G I    
Sbjct: 4281 SLLFEMVPFASIE-GSLITKVVAVDADSGHNSWLSYHFIQITESSPFSINQHTGEIRTSR 4339

Query: 201  -IVDLSALNTSTIQLVVVATDTGNP 224
             + +  ALN    +++V+  D G+P
Sbjct: 4340 VLQEKDALNH---KVIVMIKDNGHP 4361



 Score = 47.0 bits (110), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 53/215 (24%), Positives = 96/215 (44%), Gaps = 25/215 (11%)

Query: 27   ALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSN 83
            AL  + V+ A  +L    F++  Y VS  EN+P+N  +LTV     ++  + ++ Y  S 
Sbjct: 1888 ALIRIAVTDANDNLP--VFTQEVYKVSISENIPINSTVLTVNATDRDEGTNAQIMYSFSK 1945

Query: 84   DYGER-----FSIS-RQGDISLMQCLDYETEDSYRFTVYATD-TLMTTSATVNISVVNVN 136
              G       FSI+   G+I   Q  ++E +  Y  +V A D       + + I V++ N
Sbjct: 1946 TSGNNLHTSMFSINYTSGEIKTKQNFNFEAKKFYEISVQAKDGGGFVAHSKILIEVLDEN 2005

Query: 137  DWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR----GPYEKMFS 192
            D  P      +   +P     D   G++I  +E  D D G+   +  +    GP++ + S
Sbjct: 2006 DNAPDISIISFSSIIPE----DSPSGTLIALIEVHDQDSGENGEIDCQLLGTGPFQLLLS 2061

Query: 193  INDSGHISIVDLSALNTSTI---QLVVVATDTGNP 224
               + +  I+   +L+   +    + + ATD G+P
Sbjct: 2062 --STKYYRIITTGSLDREKVPWYNITIQATDRGSP 2094



 Score = 47.0 bits (110), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 48/197 (24%), Positives = 87/197 (44%), Gaps = 23/197 (11%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGER-----FSIS-RQG 95
            F++  Y VS  EN+P+N  +LTV     ++  + ++ Y  S   G       FSI+   G
Sbjct: 1093 FTQEVYKVSISENIPINSTVLTVNATDRDEGTNAQIMYSFSKTSGNNLHTSMFSINYTSG 1152

Query: 96   DISLMQCLDYETEDSYRFTVYATD-TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHI 154
            +I   Q  ++E +  Y  +V A D       + + I V++ ND  P          +P  
Sbjct: 1153 EIKTKQNFNFEAKKFYEISVQAKDGGGFVAHSKILIEVLDENDNAPDISIISVSSIIPE- 1211

Query: 155  PLADLTPGSVIGKVEAADGDKGDRVTLSLR----GPYEKMFSINDSGHISIVDLSALNTS 210
               D   G++I  +E  D D G+   +  +    GP++ + S   + +  I+   +L+  
Sbjct: 1212 ---DSPSGTLIALIEVHDQDSGENGEIDCQLLGTGPFQLLLS--STKYYRIITTGSLDRE 1266

Query: 211  TI---QLVVVATDTGNP 224
             +    + + ATD G+P
Sbjct: 1267 KVPWYNITIQATDRGSP 1283



 Score = 44.3 bits (103), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 51/198 (25%), Positives = 87/198 (43%), Gaps = 25/198 (12%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSND-----YGERFSIS-RQG 95
            F++  Y VS  EN P+N  +L V     ++  + ++ Y  S       +   FSI+   G
Sbjct: 3949 FTQEVYKVSISENTPINSTVLRVNASDMDEGTNAQITYSFSRTSVNSLHASMFSINPTSG 4008

Query: 96   DISLMQCLDYETEDSYRFTVYATD-TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHI 154
            +I     L+YE    Y  +V A D       + + + + + ND  P        LF P I
Sbjct: 4009 EIKTNNLLNYEAIRDYEISVQAKDGGGFVAHSKILVEITDENDNAPEISITS--LFTP-I 4065

Query: 155  PLADLTPGSVIGKVEAADGDKGDRVTLSLR----GPYEKMFSINDSGHI-SIVDLSALNT 209
            P  D  PG+VI  ++  D D G+   +  +     P++ + S   SG    I+   AL+ 
Sbjct: 4066 P-EDTNPGTVIALIKVHDQDSGENGDIDCQILGSAPFQLVSS---SGRFYQIITADALDR 4121

Query: 210  STI---QLVVVATDTGNP 224
              +    + +++TD G+P
Sbjct: 4122 EKVSWYNITILSTDRGSP 4139



 Score = 42.7 bits (99), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 59/235 (25%), Positives = 106/235 (45%), Gaps = 26/235 (11%)

Query: 76  RVKYWLSNDYGERFSISRQGDISL-------MQCLDYETEDSYRFTVYATDT---LMTTS 125
           +V Y +S+   E F IS    I++        +  DYE    ++  + A D     ++++
Sbjct: 493 KVIYSISSMDNEDFPISSYFSINIETGVLYAQRSFDYEQVKEFQIQITAKDNGTPSLSSN 552

Query: 126 ATVNISVVNVNDWDPRFRYPQYE----LFLPHIPLADLTPGSVIGKVEAADGDKGDRVTL 181
            T+ I V++ ND  P   YP  E    +    +P +    GS+I KV A D D G    L
Sbjct: 553 TTLIIHVIDQNDNTPMILYPSMEHSGLVLFEMVPFSS-EQGSLITKVVAVDADSGHNSWL 611

Query: 182 S---LRGPYEKMFSIND-SGHISIVD-LSALNTSTIQLVVVATDTGNPPRQASVPAIM-- 234
           S   ++      F+I+  +G I         +    ++VVV  D G+P   A+V   +  
Sbjct: 612 SYHFMQVSESPPFTISKHNGEIRTSRVFQEKDVLKHKVVVVVKDNGDPSLSATVTISLIV 671

Query: 235 --HFPEAI--VQQASSKLNSGTSSTVLIILGVVLIVLGFVIILLILYIHKNKHTK 285
             HF + +  ++  S+  ++ ++  V +I+ + +I L F+I + +  I K K  K
Sbjct: 672 ADHFQQVVPKLKNQSTGEDTASNLPVYLIIALAVISLLFIITVTLAIISKCKVEK 726



 Score = 41.2 bits (95), Expect = 0.97,   Method: Compositional matrix adjust.
 Identities = 40/147 (27%), Positives = 62/147 (42%), Gaps = 17/147 (11%)

Query: 102 CLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLAD 158
            LD E    Y  T+ ATD     +++   + + + +VND  P F   +   +LP   L  
Sbjct: 416 ALDREKTALYNITIVATDKGSPQLSSRKFIRLDISDVNDNPPVFMKSKDVAYLPENNL-- 473

Query: 159 LTPGSVIGKVEAADGDKGD--RVTLSLRG------PYEKMFSINDSGHISIVDLS--ALN 208
             PGS I +++A+D D GD  +V  S+        P    FSIN    +     S     
Sbjct: 474 --PGSSIYRIQASDLDTGDNAKVIYSISSMDNEDFPISSYFSINIETGVLYAQRSFDYEQ 531

Query: 209 TSTIQLVVVATDTGNPPRQASVPAIMH 235
               Q+ + A D G P   ++   I+H
Sbjct: 532 VKEFQIQITAKDNGTPSLSSNTTLIIH 558



 Score = 40.8 bits (94), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 55/195 (28%), Positives = 79/195 (40%), Gaps = 19/195 (9%)

Query: 45  FSKNEYSVSALENLPVNYVLLTV-TTNKPRDL--RVKYWLSND-----YGERFSISR-QG 95
           F++  Y  S  EN PVN  +L V  T+K   +  ++ Y  S       +   FSI+   G
Sbjct: 247 FTQAVYKASISENSPVNTTVLYVNATDKDEGINAQIVYSFSKTSENSFHASMFSINPING 306

Query: 96  DISLMQCLDYETEDSYRFTVYATDTL-MTTSATVNISVVNVNDWDPRFRYPQYELFLPHI 154
           +I     L++E    Y   V A D       + V I + + ND  P          L   
Sbjct: 307 EIKTKGNLNFEEARHYEMLVQAKDGGGYIAHSKVLIEITDENDNAPEIAIAS----LSSP 362

Query: 155 PLADLTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSINDSGHISIVDLSALN---T 209
            L D  PG+VI  +E  D D G    V   + G        +      IV  SAL+   T
Sbjct: 363 VLEDSAPGTVIALIEVHDQDSGKNGEVDCQIVGTVPFQLDSSTGRFYRIVTKSALDREKT 422

Query: 210 STIQLVVVATDTGNP 224
           +   + +VATD G+P
Sbjct: 423 ALYNITIVATDKGSP 437



 Score = 39.7 bits (91), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 32/104 (30%), Positives = 48/104 (46%), Gaps = 15/104 (14%)

Query: 102  CLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLAD 158
             LD E    Y  T+ ATD     +++   + + +++VND  P F    Y ++LP   L  
Sbjct: 4838 ALDREKASWYNITILATDRGSPELSSRKFIRLDILDVNDNPPIFIKSVYNVYLPENNL-- 4895

Query: 159  LTPGSVIGKVEAADGDKGD--RVTLSLRG------PYEKMFSIN 194
              PG+ I ++ A D D GD  +V  S+        P    FSIN
Sbjct: 4896 --PGASIYRIHALDLDMGDNAKVIYSISNTNTEDFPVSSYFSIN 4937



 Score = 39.7 bits (91), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 32/104 (30%), Positives = 48/104 (46%), Gaps = 15/104 (14%)

Query: 102  CLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLAD 158
             LD E    Y  T+ ATD     +++   + + +++VND  P F    Y ++LP   L  
Sbjct: 5194 ALDREKASWYNITILATDRGSPELSSRKFIRLDILDVNDNPPIFIKSVYNVYLPENNL-- 5251

Query: 159  LTPGSVIGKVEAADGDKGD--RVTLSLRG------PYEKMFSIN 194
              PG+ I ++ A D D GD  +V  S+        P    FSIN
Sbjct: 5252 --PGASIYRIHALDLDMGDNAKVIYSISNTNTEDFPVSSYFSIN 5293



 Score = 38.1 bits (87), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 31/104 (29%), Positives = 47/104 (45%), Gaps = 15/104 (14%)

Query: 102  CLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLAD 158
             LD E    Y  T+ +TD     +++   + + + +VND  P F    Y ++LP   L  
Sbjct: 4118 ALDREKVSWYNITILSTDRGSPQLSSKKFIRLDISDVNDNPPVFIKSAYTIYLPENNL-- 4175

Query: 159  LTPGSVIGKVEAADGDKGD--RVTLSLRG------PYEKMFSIN 194
              PG+ I ++ A D D GD  +V  S+        P    FSIN
Sbjct: 4176 --PGATIYRIHALDLDMGDNAKVIYSISNTNTEDFPVSSYFSIN 4217


>gi|270288731|ref|NP_001161835.1| protocadherin-11 X-linked isoform h precursor [Homo sapiens]
 gi|61814237|gb|AAX56124.1| protocadherin 11X isoform 6 [Homo sapiens]
          Length = 1329

 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 63/195 (32%), Positives = 93/195 (47%), Gaps = 20/195 (10%)

Query: 45  FSKNEYSVSALENLPVNYV--LLTVTTNKPRDLRVKYWLSNDYGERFSISRQ-GDISLMQ 101
           F+ NEY+    ENLP +    L+TVT     D         D  + F+I  Q G I    
Sbjct: 570 FTHNEYNFYVPENLPRHGTVGLITVTDPDYGDNSAVTLSILDENDDFTIDSQTGVIRPNI 629

Query: 102 CLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYP----QYELFLPHI 154
             D E ++SY F V A D      ++SA V I+VV+VND  P F  P     YEL LP  
Sbjct: 630 SFDREKQESYTFYVKAEDGGRVSRSSSAKVTINVVDVNDNKPVFIVPPSNCSYELVLP-- 687

Query: 155 PLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-DSGHISIVDLSALNTS 210
                 PG+V+ +V A D D G    +    + G    +F+I+ ++G+I++++   +   
Sbjct: 688 ---STNPGTVVFQVIAVDNDTGMNAEVRYSIVGGNTRDLFAIDQETGNITLMEKCDVTDL 744

Query: 211 TIQLVVV-ATDTGNP 224
            +  V+V A D G P
Sbjct: 745 GLHRVLVKANDLGQP 759



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/114 (32%), Positives = 61/114 (53%), Gaps = 10/114 (8%)

Query: 76  RVKYWLSNDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNIS 131
           ++ Y L  D    FS+  R G +++++ LD E ED Y FT+ A D     +T++ TV +S
Sbjct: 500 KINYLLGPDAPPEFSLDCRTGMLTVVKKLDREKEDKYLFTILAKDNGVPPLTSNVTVFVS 559

Query: 132 VVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDR--VTLSL 183
           +++ ND  P F + +Y  ++P     +L     +G +   D D GD   VTLS+
Sbjct: 560 IIDQNDNSPVFTHNEYNFYVPE----NLPRHGTVGLITVTDPDYGDNSAVTLSI 609



 Score = 38.1 bits (87), Expect = 7.9,   Method: Compositional matrix adjust.
 Identities = 36/139 (25%), Positives = 67/139 (48%), Gaps = 15/139 (10%)

Query: 103 LDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADL 159
           LD E +D+Y   V   D      +++A + +SV + ND  P F+  + E+ +P     + 
Sbjct: 207 LDREEKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVFKETEIEVSIPE----NA 262

Query: 160 TPGSVIGKVEAADGDKGDRVTLS------LRGPYEKMFSIN-DSGHISIVD-LSALNTST 211
             G+ + ++ A D D G+   +       +     ++F +N  +G I+I + L    T  
Sbjct: 263 PVGTSVTQLHATDADIGENAKIHFSFSNLVSNIARRLFHLNATTGLITIKEPLDREETPN 322

Query: 212 IQLVVVATDTGNPPRQASV 230
            +L+V+A+D G  P +A V
Sbjct: 323 HKLLVLASDGGLMPARAMV 341


>gi|332234716|ref|XP_003266551.1| PREDICTED: protocadherin beta-2 isoform 2 [Nomascus leucogenys]
          Length = 795

 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 48/151 (31%), Positives = 71/151 (47%), Gaps = 12/151 (7%)

Query: 95  GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFL 151
           G +  +Q LDYE   ++ F V ATD     +++ A V + V++ ND  P   YP      
Sbjct: 510 GHLFALQSLDYEALQAFEFLVGATDRGSPALSSEALVRVLVLDANDNSPFVLYPLQNSSA 569

Query: 152 PHIPLAD--LTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSI-NDSGHISIVD-L 204
           P   L      PG ++ KV A DGD G    LS   L+     +F +   +G +     L
Sbjct: 570 PCTELVPRVAEPGYLVTKVVAVDGDSGQNAWLSYQLLKATEPGLFGVWAHNGEVRTARLL 629

Query: 205 SALNTSTIQLVVVATDTGNPPRQASVPAIMH 235
           S  + +  +LVV+  D G PPR A+  A +H
Sbjct: 630 SERDVAKHRLVVLVKDNGEPPRSAT--ATLH 658



 Score = 46.2 bits (108), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 45/138 (32%), Positives = 63/138 (45%), Gaps = 21/138 (15%)

Query: 102 CLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLAD 158
            LD ET   Y  T+  TD     +     + + V +VND  P F    Y LF+      +
Sbjct: 407 ALDRETRSEYNITITVTDLGTPRLKIEHNITVLVSDVNDNAPAFTQTSYTLFVRE----N 462

Query: 159 LTPGSVIGKVEAADGDKGD--RVTLSLRGPYE------KMFSIN-DSGH---ISIVDLSA 206
            +P   IG V+A D D G   +VT SL  P +       + SIN D+GH   +  +D  A
Sbjct: 463 NSPALHIGSVKATDRDSGTNAQVTYSLLPPQDLHLPLASLVSINADNGHLFALQSLDYEA 522

Query: 207 LNTSTIQLVVVATDTGNP 224
           L     + +V ATD G+P
Sbjct: 523 LQ--AFEFLVGATDRGSP 538


>gi|348582924|ref|XP_003477226.1| PREDICTED: protocadherin gamma-A7-like [Cavia porcellus]
          Length = 877

 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 72/274 (26%), Positives = 122/274 (44%), Gaps = 45/274 (16%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKP---RDLRVKYWLSNDYGERFSISR-------Q 94
           FS++ YSV   EN P    + +VT + P   ++ +V Y L ND  +   +S         
Sbjct: 452 FSQSSYSVYIPENNPRGASIFSVTAHDPDSEKNAQVTYSLGNDIIQGAPVSSYVSINSDT 511

Query: 95  GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFL 151
           G +  +Q  DYE     +  V A D+    ++++ ++N+ V++ ND  P   YP     +
Sbjct: 512 GVLYAIQSFDYEQFQKLQLRVSARDSGDPPLSSNVSLNLFVLDQNDNAPEILYPT----I 567

Query: 152 P-----HIPLADLT--PGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-DSGHI- 199
           P      + LA  +  PG ++ KV A D D G    LS   L+     +FS+   +G + 
Sbjct: 568 PTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGKNAWLSYRLLKASEPGLFSVGLHTGEVC 627

Query: 200 ---SIVDLSALNTSTIQLVVVATDTGNPPRQASVPAIM----HFPEAIVQQASSKLNSGT 252
              +++D   L  S   LVV   D G PP  A+V   +      P+ +    S ++ +  
Sbjct: 628 TARALLDRDTLKQS---LVVAVQDHGQPPLSATVTLTVAVADSIPDVLADLGSIRIPTDP 684

Query: 253 SST------VLIILGVVLIVLGFVIILLILYIHK 280
             +      V+ +  V  + L FVI+LL L + +
Sbjct: 685 EDSDLTLYLVVAVATVSCVFLVFVIVLLALKLRR 718



 Score = 47.4 bits (111), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 56/194 (28%), Positives = 86/194 (44%), Gaps = 17/194 (8%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGERFSI----SRQGDI 97
           FS  +Y V+  EN+P+   LLTV     ++  + +V Y       +   I    S  G++
Sbjct: 242 FSLPQYQVTVPENIPIGTRLLTVNAVDLDEGINGQVTYSFRQITPKLLRIFHLNSLTGEL 301

Query: 98  SLMQCLDYETEDSYRFTVYATDTLMT-TSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
           S ++ LDYE    Y   V A D   + T A V I +++VND  P          +P    
Sbjct: 302 STLEGLDYEESSFYEMEVQAQDGPGSLTKAKVLIMILDVNDNAPEVTVTSVSNSIPE--- 358

Query: 157 ADLTPGSVIG--KVEAADGDKGDRVTLSLRG--PYEKMFSINDSGH-ISIVDLSALNTST 211
            D  PG+VI    ++  D +K   VT +L    P++   SI++    I+   L     S 
Sbjct: 359 -DTPPGTVIALFYLQDRDSEKNGEVTCTLPENLPFKLERSIDNYYRLITAKHLDREKCSV 417

Query: 212 IQLVVVATDTGNPP 225
             + + ATD G PP
Sbjct: 418 YNVTLKATDGGTPP 431



 Score = 44.3 bits (103), Expect = 0.099,   Method: Compositional matrix adjust.
 Identities = 37/118 (31%), Positives = 61/118 (51%), Gaps = 16/118 (13%)

Query: 82  SNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYA---TDTLMTTSATVNISVVNVNDW 138
           S +YG++       ++ L Q LD E E  +   + A    D  ++ +A + ++VV+VND 
Sbjct: 184 SGNYGKK-----NPELVLEQVLDREEEVIHHLVLTAYDGGDPPLSGTARIQVTVVDVNDH 238

Query: 139 DPRFRYPQYELFLP-HIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSI 193
            P F  PQY++ +P +IP+     G+ +  V A D D+G   +VT S R    K+  I
Sbjct: 239 TPVFSLPQYQVTVPENIPI-----GTRLLTVNAVDLDEGINGQVTYSFRQITPKLLRI 291



 Score = 40.4 bits (93), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 52/177 (29%), Positives = 75/177 (42%), Gaps = 25/177 (14%)

Query: 67  VTTNKPRDLRVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDT---LMT 123
           VT   P +L  K   S D   R   ++         LD E    Y  T+ ATD     ++
Sbjct: 382 VTCTLPENLPFKLERSIDNYYRLITAKH--------LDREKCSVYNVTLKATDGGTPPLS 433

Query: 124 TSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGD--KGDRVTL 181
           T   ++I V + ND  P F    Y +++P     +   G+ I  V A D D  K  +VT 
Sbjct: 434 TETHISIHVADTNDNPPIFSQSSYSVYIPE----NNPRGASIFSVTAHDPDSEKNAQVTY 489

Query: 182 SL------RGPYEKMFSIN-DSGHI-SIVDLSALNTSTIQLVVVATDTGNPPRQASV 230
           SL        P     SIN D+G + +I          +QL V A D+G+PP  ++V
Sbjct: 490 SLGNDIIQGAPVSSYVSINSDTGVLYAIQSFDYEQFQKLQLRVSARDSGDPPLSSNV 546


>gi|26335715|dbj|BAC31558.1| unnamed protein product [Mus musculus]
          Length = 932

 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 61/197 (30%), Positives = 88/197 (44%), Gaps = 23/197 (11%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVT-TNKPRDLRVKYWLS-----NDYGERFSI-SRQGDI 97
           F+++EY VS  EN PV   LLT+T T+    +  K   S     +   E F + S  G+I
Sbjct: 242 FTQSEYRVSVPENTPVGTRLLTLTATDADEGINAKLTFSFRNEEDKISETFQLDSNLGEI 301

Query: 98  SLMQCLDYETEDSYRFTVYATD-TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
           S +Q LDYE    Y   V A D   +  SA V ++V +VND  P       E+ L  +  
Sbjct: 302 STIQSLDYEESRFYLMEVVAQDGGALLASAKVLVTVQDVNDNAP-------EVILTSLTS 354

Query: 157 A---DLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDS--GHISIVDLSALN--- 208
           +   D  PG++I      D D G+   +S   P    F +  S   +  ++   AL+   
Sbjct: 355 SVSEDCLPGTIIALFSVHDADSGENGEISCSIPKNLPFKLEKSVDNYYHLLTTRALDREE 414

Query: 209 TSTIQLVVVATDTGNPP 225
           TS   + V   D G PP
Sbjct: 415 TSDYNITVTVVDRGTPP 431



 Score = 42.4 bits (98), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 57/214 (26%), Positives = 94/214 (43%), Gaps = 35/214 (16%)

Query: 45  FSKNEYSVSALENLPVNYVLLTV---TTNKPRDLRVKYWLSNDYGERFSISR-------Q 94
           FS+  YS S  EN P    + +V     +   + +V Y L+ +  +   +S         
Sbjct: 452 FSRPFYSTSISENNPRGVSIFSVYAYDADSGDNAQVTYSLAENTFQEVPVSSYVSINSDT 511

Query: 95  GDISLMQCLDYETEDSYRFTVYATDTL---MTTSATVNISVVNVNDWDPRFRYPQYELFL 151
           G +  +Q  DYE     +  V A D+    ++++ ++++ V++ ND  P   YP     +
Sbjct: 512 GVLYALQSFDYEHLRDLQLLVTAKDSGTPPLSSNVSMSLFVLDQNDNIPEILYPT----I 567

Query: 152 P-----HIPLADLT--PGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-DSGHI- 199
           P      + LA  +  PG ++ KV A D D G    LS   L+     +FSI   +G + 
Sbjct: 568 PTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYRLLKASEPGLFSIGLHTGEVC 627

Query: 200 ---SIVDLSALNTSTIQLVVVATDTGNPPRQASV 230
              +++D   L  S   LVV   D G PP  A+V
Sbjct: 628 TARALLDRDVLKQS---LVVAVQDHGQPPLSATV 658



 Score = 39.3 bits (90), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 43/144 (29%), Positives = 65/144 (45%), Gaps = 19/144 (13%)

Query: 101 QCLDYETEDSYRFTVYATDTL---MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLA 157
           + LD E    Y  TV   D     ++T   +++ V ++ND  P F  P Y        ++
Sbjct: 408 RALDREETSDYNITVTVVDRGTPPLSTENHISLKVADINDNPPTFSRPFYS-----TSIS 462

Query: 158 DLTP-GSVIGKVEAADGDKGD--RVTLSLRG------PYEKMFSIN-DSGHI-SIVDLSA 206
           +  P G  I  V A D D GD  +VT SL        P     SIN D+G + ++     
Sbjct: 463 ENNPRGVSIFSVYAYDADSGDNAQVTYSLAENTFQEVPVSSYVSINSDTGVLYALQSFDY 522

Query: 207 LNTSTIQLVVVATDTGNPPRQASV 230
            +   +QL+V A D+G PP  ++V
Sbjct: 523 EHLRDLQLLVTAKDSGTPPLSSNV 546


>gi|189053559|dbj|BAG35725.1| unnamed protein product [Homo sapiens]
          Length = 832

 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 74/295 (25%), Positives = 126/295 (42%), Gaps = 37/295 (12%)

Query: 14  VVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPR 73
           +V  ++Y N   +A  TLIV+    +    QFS++ +     E++ +   L  VT   P 
Sbjct: 539 LVFGVKY-NASSFAKFTLIVTDVNEAP---QFSQHVFQAKVSEDVAIGTKLGNVTAKDPE 594

Query: 74  DLRVKYWLSNDYGERFSISR-QGDISLMQCLDYETEDSYRFTVYATDTLMTTSAT---VN 129
            L + Y L  D      I    G+I  +  LD E    YR  V AT+   ++ ++    +
Sbjct: 595 GLDISYSLRGDTRGWLKIDHVTGEIFSVAPLDREAGSPYRVQVVATEVGGSSLSSVSEFH 654

Query: 130 ISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEK 189
           + +++VND  PR       LF  H PL+   PGS+I   EA D D+        RGP+  
Sbjct: 655 LILMDVNDNPPRLAKDYTGLFFCH-PLS--APGSLI--FEATDDDQH-----LFRGPH-F 703

Query: 190 MFSINDSGHISIVDLSALNTSTIQL--------------VVVATDTGNPPRQASVPAIMH 235
            FS+      +  ++S +N +  +L              ++   D G PP +  V   + 
Sbjct: 704 TFSLGSGSLQNDWEVSKINGTHARLSTRHTDFEEREYVVLIRINDGGRPPLEGIVSLPVT 763

Query: 236 FPEAI----VQQASSKLNSGTSSTVLIILGVVLIVLGFVIILLILYIHKNKHTKN 286
           F   +     + A  +    T    + IL   L+V+G ++ ++ + I K+K   N
Sbjct: 764 FCSCVEGSCFRPAGHQTGIPTVGMAVGILLTTLLVIGIILAVVFIRIKKDKGKDN 818


>gi|262263242|tpg|DAA06619.1| TPA_inf: protocadherin gamma b17 isoform [Anolis carolinensis]
          Length = 939

 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 66/259 (25%), Positives = 111/259 (42%), Gaps = 29/259 (11%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKP---RDLRVKYWLSNDYGERFSIS-------RQ 94
           F K+ YS+   EN P    + T+    P    + R+ Y + N   ++  IS         
Sbjct: 453 FEKSSYSIYVTENNPSGTSIFTIKAFDPDVGSNARITYSILNSNIQKLPISSYISINSET 512

Query: 95  GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFL 151
           G I   +  DYE    ++  V A D     ++++AT+ + +++ ND  PR  YP  E   
Sbjct: 513 GTIYAQRSFDYEEFREFQLQVKAQDGGSPPLSSNATLRVFILDQNDNTPRILYPSPEA-- 570

Query: 152 PHIPLADLTPGS-----VIGKVEAADGDKGDRVTLS---LRGPYEKMFSIND-SGHISIV 202
               L ++ P S     ++ KV A D D G    LS   ++     +F+I   +G I   
Sbjct: 571 KSSVLFEMVPRSAEEDYLVTKVVAVDADSGHNAWLSYHLIQATEPGLFTIGSHTGEIRTS 630

Query: 203 DLSALNTSTIQ-LVVVATDTGNPPRQASVPAIM----HFPEAIVQQASSKLNSGTSSTVL 257
                  S  Q LVVV  D G PP  A+V   +    +F EA+ +  +   +  T   + 
Sbjct: 631 RAFVERDSVKQRLVVVVKDNGQPPLSATVTLNLVFAENFQEALPEMKNQTRDLETQDDLQ 690

Query: 258 IILGVVLIVLGFVIILLIL 276
             L + L ++ F+ +L ++
Sbjct: 691 FYLVLALALISFLFLLAVI 709



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 57/227 (25%), Positives = 96/227 (42%), Gaps = 12/227 (5%)

Query: 9   QPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVT 68
           Q I L++ AI      +     + ++    +     FS+  Y VS  EN+PV  ++L V 
Sbjct: 208 QTIHLILEAIDGGEPRKTGTVQIWINVTDANDNPPTFSQEVYKVSLRENVPVGTLVLQVA 267

Query: 69  T---NKPRDLRVKYWLSNDYGE--RFSIS-RQGDISLMQCLDYETEDSYRFTVYATD-TL 121
               ++  + R+ Y  +N + +  +F +    G I+LM  LD+E +  Y  TV A D   
Sbjct: 268 ASDNDEGTNARITYHFTNMHQQQKKFEVDPSNGKITLMDTLDFEEDKEYIMTVAAKDGGG 327

Query: 122 MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTL 181
           + T   V I +V+ ND  P          +P    +D+    +  KV   D D   +VT 
Sbjct: 328 LATHCKVQIQIVDENDNPPEVTLVSLFSPVPENSESDILIALI--KVNDKDQDDNGKVTC 385

Query: 182 SLRGPYEKMFSINDSGHISIVDLSALNTSTI---QLVVVATDTGNPP 225
            L          + + +  ++    L+  T     + + ATD GNPP
Sbjct: 386 YLGNDLPFKIRPSSNNYYKLLADHPLDRETAPKYNITITATDKGNPP 432


>gi|355757522|gb|EHH61047.1| Protocadherin-11 X-linked [Macaca fascicularis]
          Length = 1327

 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 75/277 (27%), Positives = 119/277 (42%), Gaps = 59/277 (21%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGERFSI------------- 91
           F+ NEY+    ENLP +  +  +T   P           DYGE  ++             
Sbjct: 569 FTHNEYNFYVPENLPKHGTVGLITVTDP-----------DYGENSAVTLSILDENDGFTI 617

Query: 92  -SRQGDISLMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYP-- 145
            S+ G I      D E ++SY F V A D      ++SA V I+VV+VND  P F  P  
Sbjct: 618 DSKTGVIRPNISFDREKQESYTFYVKAEDGGRVSRSSSAKVTINVVDVNDNKPVFIVPPS 677

Query: 146 --QYELFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEK-MFSIND-SGHI 199
              YEL LP        PG+V+ +V A D D G    V  S+ G   + +F IN+ +G+I
Sbjct: 678 NYSYELVLP-----STDPGTVVFQVIAVDNDTGMNAEVRYSIVGENTRDLFEINETTGNI 732

Query: 200 SIVDLSALNTSTIQLVVV-ATDTGNPPRQASVPAIMHFPEAIVQQAS------------- 245
            + +   +    +  V+V A D G P    SV  +  F    V  A+             
Sbjct: 733 IMKEKCDVTDLGLHRVLVKANDLGQPDSLFSVITVNLFVNESVTNATLINELLHKSTEAP 792

Query: 246 ----SKLNSGTSSTVLIILGVVLIVLGFVIILLILYI 278
               +++   +S T+  +  +V +V G + +++++ I
Sbjct: 793 VTPNTEIADASSPTIDYVKILVAVVAGTITVVVVISI 829



 Score = 55.5 bits (132), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 36/114 (31%), Positives = 61/114 (53%), Gaps = 10/114 (8%)

Query: 76  RVKYWLSNDYGERFSISRQ-GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNIS 131
            + + L  D    FS+ R+ G +++++ LD E E+ Y FTV A D     +T++ TV +S
Sbjct: 499 EINFLLGPDAPPEFSLDRRTGMLTVLKKLDREKEEKYFFTVLAKDNGVPPLTSNVTVFVS 558

Query: 132 VVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDR--VTLSL 183
           V++ ND  P F + +Y  ++P     +L     +G +   D D G+   VTLS+
Sbjct: 559 VIDQNDNSPAFTHNEYNFYVPE----NLPKHGTVGLITVTDPDYGENSAVTLSI 608



 Score = 39.3 bits (90), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 38/139 (27%), Positives = 69/139 (49%), Gaps = 15/139 (10%)

Query: 103 LDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADL 159
           LD E +D+Y   V   D      +++A + +SV + ND  P F+  + E+ +P     + 
Sbjct: 206 LDREEKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVFKETEIEVSIPE----NA 261

Query: 160 TPGSVIGKVEAADGDKGD--RVTLSLRGPY----EKMFSIND-SGHISIVD-LSALNTST 211
             G+ + ++ A D D G+  R+  S         +++F +N  +G I+I + L    T  
Sbjct: 262 PVGTSVTQLHATDADIGENARIHFSFSNLVSNIAKRLFHLNSTTGLITIKEPLDREETPN 321

Query: 212 IQLVVVATDTGNPPRQASV 230
            +L+V+A+D G  P +A V
Sbjct: 322 HKLLVLASDGGLVPARAMV 340


>gi|395526460|ref|XP_003765381.1| PREDICTED: protocadherin-16 [Sarcophilus harrisii]
          Length = 3095

 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 79/152 (51%), Gaps = 10/152 (6%)

Query: 89   FSISRQ-GDISLMQCLDYETEDSYRFTVYATDTLM---TTSATVNISVVNVNDWDPRFRY 144
            F I  Q G+++  + LD E + SY+  V   D      +T+ TV++ V+++ND  P F +
Sbjct: 945  FHIHPQTGEVTTRRSLDREQQSSYQLLVQVQDGGAPPRSTTGTVHVMVLDLNDNSPTFLH 1004

Query: 145  --PQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTL--SLRGPYEKMFSIN-DSGHI 199
                     P   L  + PGS++ +++A D D+G+  T+  S+ GP  ++F ++  SG +
Sbjct: 1005 TLGAAGGGFPVQVLEGIPPGSLVTRLQAKDPDEGENGTILYSMTGPGSELFLLHPHSGEL 1064

Query: 200  SIVD-LSALNTSTIQLVVVATDTGNPPRQASV 230
            S    LS L      L V A D GNPPR  S+
Sbjct: 1065 STAGPLSRLERPHYVLTVNAQDQGNPPRSTSL 1096



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 59/201 (29%), Positives = 88/201 (43%), Gaps = 17/201 (8%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKP---RDLRVKYWLSNDYGERFSIS-RQGDISLM 100
            F+   Y+V   E+ P   +LL +  + P    + RV Y+L    G  F +    G++   
Sbjct: 1645 FTAPSYTVEVPEDAPPGTLLLQLEAHDPDAGANGRVAYYLGEGAGGAFLLEPGSGELRTA 1704

Query: 101  QCLDYETEDSYRFTVYATDTL----MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
              LD E +  Y F V+A D      ++ S +V I+V +VND  P F      L L     
Sbjct: 1705 VPLDRERQARYGFVVHAVDGAAAGPLSASVSVTITVRDVNDHAPAFPASPLRLRLRPTRT 1764

Query: 157  ADLTPGS----VIGKVEAADGDKGDRVTL--SLRGPYEKMFSIND-SGHISIV-DLSALN 208
            A L  GS     +  + A D D G   ++   L GP     S++  +G I +    +AL 
Sbjct: 1765 A-LGQGSSGPHFLATLRAEDRDAGANASILYRLAGPAPPGASVDSYTGEIRLPRPPAALG 1823

Query: 209  TSTIQLVVVATDTGNPPRQAS 229
                 L +VATD G P R A+
Sbjct: 1824 PRDRVLFIVATDLGRPARSAT 1844



 Score = 55.5 bits (132), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 52/147 (35%), Positives = 67/147 (45%), Gaps = 12/147 (8%)

Query: 89   FSISRQGD-ISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQY 147
            FS+ R G  ISL + LD+E  D Y+  + A D     SA + I V +VND  P F    Y
Sbjct: 2115 FSVGRYGGRISLTEPLDFEHMDCYQLHLLARDGQHEGSANLTIQVEDVNDNVPTFSQSLY 2174

Query: 148  ELFLPHIPLADLTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSINDSGH----ISI 201
            ++ L        TPGS I  + A D D GD  RV+  L    E  F I+ S      I  
Sbjct: 2175 QVTL----AEHTTPGSAILTISATDLDSGDNGRVSYHLVSSAEG-FDIDPSNGTLFMIQA 2229

Query: 202  VDLSALNTSTIQLVVVATDTGNPPRQA 228
               S     T+ +V+ A D G P R A
Sbjct: 2230 ASQSLGGLGTVDMVLEARDHGVPRRTA 2256



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 64/227 (28%), Positives = 101/227 (44%), Gaps = 20/227 (8%)

Query: 13   LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLT--VTTN 70
            L + A       R A   +IV   G + R  +F +     +  E+ P   ++++   T  
Sbjct: 1829 LFIVATDLGRPARSATGVVIVGLQGEAERGPRFPRPSSEAAIPEDAPPGTLIMSPQATHA 1888

Query: 71   KPRDLRVKYW-LSNDYGERFSISRQ-GDISLMQC--LDYETEDSYRFTVYATDTLMTTSA 126
                  + Y  LS +  + FSI    G +S+     LD+ET    R  + A         
Sbjct: 1889 GGSTGAITYSILSGNEHDLFSIEPSTGALSVKAAGGLDFETSPRLRLVLQAESGGSFGFT 1948

Query: 127  TVNISVVNVNDWDPRFRYPQYELFLPHI-PLADLTPGSVIGKVEAADGDK--GDRVTLSL 183
             + +S+ + ND  PRF  P Y  F+P   PL+    G ++ KVEA D D+  G +VT SL
Sbjct: 1949 VLTLSLQDANDNAPRFLKPHYAAFVPESRPLS----GPLL-KVEADDLDQGPGGQVTYSL 2003

Query: 184  RGPY--EKMFSINDSGHISIVDLSALNT---STIQLVVVATDTGNPP 225
               +    +F I D    +I   + L+    +  +LVV+ATD G+PP
Sbjct: 2004 APSHATRGLFHI-DPAMGTITTTAILDREIWAETRLVVMATDRGSPP 2049



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 60/235 (25%), Positives = 101/235 (42%), Gaps = 30/235 (12%)

Query: 11   ITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTT- 69
            + +V+ A  +    R A AT+ +     +     F +  Y ++  E+LP    +L +   
Sbjct: 2240 VDMVLEARDHGVPRRTAQATVHIQLQDENDYTPSFVQPYYHITVAEDLPPGSTVLILEAT 2299

Query: 70   ----NKPRDLRVKYWLSNDYGERFSISRQ-----------GDISLMQCLDYETEDSYRFT 114
                ++P        +S + G+ F + R            G + L++ LD+E+   Y  T
Sbjct: 2300 DADQSRPHATLDYAIISGNRGQAFQLERHLSEGGSGPQASGCLVLLEPLDFESVTEYNLT 2359

Query: 115  VYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAA 171
            V A D      +TS  V I+V +VND  P F  P Y + +P     D   G+ + +V A+
Sbjct: 2360 VCAADRGKPPRSTSVLVVITVQDVNDNPPVFAQPHYRVAVPE----DTPVGTELLRVAAS 2415

Query: 172  DGDKGDR----VTLSLRGPYEKMFSIND-SGHISIV-DLSALNTSTIQLVVVATD 220
            D D G       T+S   P   +F +++ SG + +   L     +  QLVV A D
Sbjct: 2416 DADPGPHGLVYFTISSGDP-AHLFELDESSGALRLARQLDREAQAQHQLVVEAAD 2469



 Score = 48.5 bits (114), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 56/197 (28%), Positives = 85/197 (43%), Gaps = 19/197 (9%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTTNKPRD-LRVKYWLSND-YGERFSI-SRQGDISLM 100
           +F  + Y+V   E+       L V    P+    + Y L +D  G  F + SR G + + 
Sbjct: 791 KFDHSTYNVELSESTAPGTKFLQVRAQGPKGGPPISYHLQSDGVGTTFGVDSRSGWLWVR 850

Query: 101 QCLDYETEDSYRFTVYAT----DTLMTTSATVNISVVNVNDWDPRF-RYPQYELFLPHIP 155
             LD E  + Y   V A        +T +ATV +S+ + ND  PR    P +     + P
Sbjct: 851 TALDREAWEVYTLPVLAVAGDGQGSLTGTATVRVSIQDRNDHGPRLTEEPTFLAVAENQP 910

Query: 156 LADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEK-MFSIN-DSGHISI-VDLSALNT 209
                PG+  G++ A D D G    L+   L+ P E   F I+  +G ++    L     
Sbjct: 911 -----PGTTAGRITATDRDSGPNGHLTYHLLQPPDESGAFHIHPQTGEVTTRRSLDREQQ 965

Query: 210 STIQLVVVATDTGNPPR 226
           S+ QL+V   D G PPR
Sbjct: 966 SSYQLLVQVQDGGAPPR 982



 Score = 46.2 bits (108), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 45/151 (29%), Positives = 73/151 (48%), Gaps = 19/151 (12%)

Query: 88  RFSISRQGDISLMQC----LDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDP 140
           +F+++ Q  +  + C    LD E +D+Y   V ATD     +   A + + V +VND  P
Sbjct: 197 QFALTTQDSVIYLVCVARRLDREEQDAYELRVTATDAGTPPLRAEAALVLLVTDVNDNAP 256

Query: 141 RFRYPQYELFLPHIPLADLT-PGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSINDS 196
            F      L+ P  PL ++  PGS + +V A D D+G    ++   + G +   F+I+ S
Sbjct: 257 AF---DRLLYQPE-PLPEVVLPGSFVARVTARDPDQGPNGNVAYSIVPGTHAHWFAIDAS 312

Query: 197 GHISIVDLSALN---TSTIQLVVVATDTGNP 224
             + I   + L+       QL V+ATD G P
Sbjct: 313 TGV-ITTAAPLDYELEPRPQLTVLATDGGQP 342



 Score = 45.4 bits (106), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 51/181 (28%), Positives = 78/181 (43%), Gaps = 16/181 (8%)

Query: 56   ENLPVNYVLLTVTTNKPRDL----RVKYWLS--NDYGERFSISRQGDISLMQCLDYETED 109
            E+ P   V L V    P DL    R+ Y L+  N  G        G +S+ + LD E   
Sbjct: 1345 EDQPAGSVALYVVARDP-DLGEAARLSYQLAGGNSDGHFHLHPSTGALSITRPLDREQRA 1403

Query: 110  SYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIG 166
             +  TV A D      + +  + +SVV+VND  P F    Y + +P     +  PG+ + 
Sbjct: 1404 EHLLTVVAADHGSPPRSATQLLTVSVVDVNDEAPTFPQAAYHVHVPE----NRPPGTTVL 1459

Query: 167  KVEAADGDKGDRVTLSLRGPYEKMFSIN-DSGHISIVD-LSALNTSTIQLVVVATDTGNP 224
             + A D D G    ++  G     FS++ ++G ++    L       I L V A D G+P
Sbjct: 1460 TLHATDPDLGVNGQVTYGGVSGDTFSLDPNTGVLTTRQVLDREEQQEINLTVYAQDGGSP 1519

Query: 225  P 225
            P
Sbjct: 1520 P 1520



 Score = 44.7 bits (104), Expect = 0.069,   Method: Compositional matrix adjust.
 Identities = 26/85 (30%), Positives = 44/85 (51%), Gaps = 7/85 (8%)

Query: 95   GDISLMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFL 151
            G +   + LD E E S++  V A D     ++ +  V ++V++ ND  P F  P Y + +
Sbjct: 1595 GTLGTARSLDREAEPSFQLLVAARDGGQPALSATMLVTVAVLDANDHAPTFTAPSYTVEV 1654

Query: 152  PHIPLADLTPGSVIGKVEAADGDKG 176
            P     D  PG+++ ++EA D D G
Sbjct: 1655 PE----DAPPGTLLLQLEAHDPDAG 1675



 Score = 42.7 bits (99), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 44/126 (34%), Positives = 59/126 (46%), Gaps = 24/126 (19%)

Query: 123  TTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLA-DLTPGSVIGKVEAADGDKGDRVTL 181
            T  ATV+I + + ND+ P F  P Y     HI +A DL PGS +  +EA D D+  R   
Sbjct: 2255 TAQATVHIQLQDENDYTPSFVQPYY-----HITVAEDLPPGSTVLILEATDADQ-SRPHA 2308

Query: 182  SL--------RGP---YEKMFSINDSGHIS---IVDLSALNTSTI---QLVVVATDTGNP 224
            +L        RG     E+  S   SG  +   +V L  L+  ++    L V A D G P
Sbjct: 2309 TLDYAIISGNRGQAFQLERHLSEGGSGPQASGCLVLLEPLDFESVTEYNLTVCAADRGKP 2368

Query: 225  PRQASV 230
            PR  SV
Sbjct: 2369 PRSTSV 2374



 Score = 42.4 bits (98), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 31/101 (30%), Positives = 48/101 (47%), Gaps = 14/101 (13%)

Query: 79  YWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNV 135
           +W + D       +  G I+    LDYE E   + TV ATD     ++++A V++ + +V
Sbjct: 305 HWFAID-------ASTGVITTAAPLDYELEPRPQLTVLATDGGQPALSSTAVVHVVLQDV 357

Query: 136 NDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG 176
           ND +P F+   Y   LP        PG+   +V A D D G
Sbjct: 358 NDNEPVFKRTFYNASLPE----GTAPGTCFLQVTATDADSG 394



 Score = 38.5 bits (88), Expect = 5.7,   Method: Compositional matrix adjust.
 Identities = 31/103 (30%), Positives = 51/103 (49%), Gaps = 9/103 (8%)

Query: 126 ATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGD--RVTLSL 183
           A V + + +VND  P F  P   ++LP     D  PG+ +  + A D D G    VT +L
Sbjct: 664 ARVRVLLEDVNDNAPAFPSPTDTVWLP----PDAGPGTPVYTLRATDPDSGSNGHVTFTL 719

Query: 184 RGPYEKMFSINDS-GHISIVDLSALNTSTIQLVVVATDTGNPP 225
               +  F+++ + GH+ +V    L     +L + A D+G+PP
Sbjct: 720 VAGGKGAFAVDPATGHVQLV--RPLGGLAQELELEARDSGSPP 760


>gi|195054108|ref|XP_001993968.1| GH18138 [Drosophila grimshawi]
 gi|193895838|gb|EDV94704.1| GH18138 [Drosophila grimshawi]
          Length = 1728

 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 63/222 (28%), Positives = 107/222 (48%), Gaps = 13/222 (5%)

Query: 37  GTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKY-WLSNDYGERFSISRQ- 94
           G + +  +F+   Y V   E   +N  +  V  + P +  V Y  +S +   +FS+ +Q 
Sbjct: 604 GPNTKPPRFTNVLYEVQVSEGAEINSTVTVVHADDPENDPVIYSIMSGNDLRQFSVGQQS 663

Query: 95  GDISLMQCLDYETEDSYRFTVYATDTL-MTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
           G I +++ LD E+   Y+  V A D   ++++ATVNI V ++ND +P F     EL  P+
Sbjct: 664 GVIMVIRKLDRESLTRYQLIVKAEDNGGLSSTATVNIKVTDINDKNPEFD----ELNQPY 719

Query: 154 IPLADL-TPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSIN-DSGHISIV-DLSALNTS 210
           +   D     + +G V A D D+G    ++   P +  F+IN  SG I    +L     +
Sbjct: 720 VFHVDEGKDDAFVGIVHATDADEGVNAEITYSIPTDIPFAINGKSGEIRTSNELDYERVN 779

Query: 211 TIQLVVVATDTGNPPR--QASVPAIMH-FPEAIVQQASSKLN 249
             + VV A D     R   ASV  I+H  P+ + +   +++N
Sbjct: 780 EYKFVVTAKDGAPDARLGTASVTVIVHDLPDEVPKFNDARIN 821



 Score = 47.8 bits (112), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 57/225 (25%), Positives = 100/225 (44%), Gaps = 51/225 (22%)

Query: 38  TSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGERFSIS--RQG 95
           T  R +Q    +  V+ L    V Y ++   TN   D   K   ++ YG  F+IS   QG
Sbjct: 167 TVFRNIQAVDKDAGVNGL----VEYFIVKGNTNTTED--EKLTSADGYGS-FAISFPHQG 219

Query: 96  DISLMQCLDYETEDSYRFTVYATDTL------MTTSATVNISVVNVNDWDPRFRY----- 144
            +++ + LDYE    Y  T+ A+D        ++++AT+ +++ + +D DP F Y     
Sbjct: 220 QVTVAKTLDYEKIQRYYLTIVASDRARSVSERLSSTATLTVNIADSDDMDPSFIYRGCAL 279

Query: 145 -------PQYELFLPHIPLADLTPGSVIG-------KVEAADGDK-GDRVTLS----LRG 185
                  P+Y   +P         GSV G       +++A D D    R+  S    + G
Sbjct: 280 LDGACINPEYTASVP--------AGSVQGVLNVLPERIQAVDLDTISSRIRYSFASGMPG 331

Query: 186 PYEKMFSINDSGHISIVDLSALNTSTIQ---LVVVATDTGNPPRQ 227
            Y   F I++   + +  + A++TST +   ++V A +    PR+
Sbjct: 332 NYADYFEIDEETGV-LKQIKAVDTSTAKRYDIIVRAEEISPAPRR 375


>gi|355704970|gb|EHH30895.1| Protocadherin-11 X-linked [Macaca mulatta]
          Length = 1327

 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 75/277 (27%), Positives = 119/277 (42%), Gaps = 59/277 (21%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGERFSI------------- 91
           F+ NEY+    ENLP +  +  +T   P           DYGE  ++             
Sbjct: 569 FTHNEYNFYVPENLPKHGTVGLITVTDP-----------DYGENSAVTLSILDENDGFTI 617

Query: 92  -SRQGDISLMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYP-- 145
            S+ G I      D E ++SY F V A D      ++SA V I+VV+VND  P F  P  
Sbjct: 618 DSKTGVIRPNISFDREKQESYTFYVKAEDGGRVSRSSSAKVTINVVDVNDNKPVFIVPPS 677

Query: 146 --QYELFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEK-MFSIND-SGHI 199
              YEL LP        PG+V+ +V A D D G    V  S+ G   + +F IN+ +G+I
Sbjct: 678 NYSYELVLP-----STDPGTVVFQVIAVDNDTGMNAEVRYSIVGENTRDLFEINETTGNI 732

Query: 200 SIVDLSALNTSTIQLVVV-ATDTGNPPRQASVPAIMHFPEAIVQQAS------------- 245
            + +   +    +  V+V A D G P    SV  +  F    V  A+             
Sbjct: 733 IMKEKCDVTDLGLHRVLVKANDLGQPDSLFSVVTVNLFVNESVTNATLINELLHKSTEAP 792

Query: 246 ----SKLNSGTSSTVLIILGVVLIVLGFVIILLILYI 278
               +++   +S T+  +  +V +V G + +++++ I
Sbjct: 793 VTPNTEIADASSPTIDYVKILVAVVAGTITVVVVISI 829



 Score = 55.1 bits (131), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 36/114 (31%), Positives = 61/114 (53%), Gaps = 10/114 (8%)

Query: 76  RVKYWLSNDYGERFSISRQ-GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNIS 131
            + + L  D    FS+ R+ G +++++ LD E E+ Y FTV A D     +T++ TV +S
Sbjct: 499 EINFLLGPDAPPEFSLDRRTGMLTVLKKLDREKEEKYFFTVLAKDNGVPPLTSNVTVFVS 558

Query: 132 VVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDR--VTLSL 183
           V++ ND  P F + +Y  ++P     +L     +G +   D D G+   VTLS+
Sbjct: 559 VIDQNDNSPAFTHNEYNFYVPE----NLPKHGTVGLITVTDPDYGENSAVTLSI 608



 Score = 39.3 bits (90), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 38/139 (27%), Positives = 69/139 (49%), Gaps = 15/139 (10%)

Query: 103 LDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADL 159
           LD E +D+Y   V   D      +++A + +SV + ND  P F+  + E+ +P     + 
Sbjct: 206 LDREEKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVFKETEIEVSIPE----NA 261

Query: 160 TPGSVIGKVEAADGDKGD--RVTLSLRGPY----EKMFSIND-SGHISIVD-LSALNTST 211
             G+ + ++ A D D G+  R+  S         +++F +N  +G I+I + L    T  
Sbjct: 262 PVGTSVTQLHATDADIGENARIHFSFSNLVSNIAKRLFHLNSTTGLITIKEPLDREETPN 321

Query: 212 IQLVVVATDTGNPPRQASV 230
            +L+V+A+D G  P +A V
Sbjct: 322 HKLLVLASDGGLVPARAMV 340


>gi|154147662|ref|NP_001093700.1| protocadherin 20 precursor [Xenopus (Silurana) tropicalis]
 gi|134026222|gb|AAI36069.1| pcdh20 protein [Xenopus (Silurana) tropicalis]
          Length = 894

 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 62/232 (26%), Positives = 106/232 (45%), Gaps = 29/232 (12%)

Query: 17  AIQYDNQDRYALATLIVSKAGTSLRELQ-------------FSKNEYSVSALENLPVNYV 63
           A+ Y+ +  Y +A + +S+ G  +++L              F+++   ++  EN   N  
Sbjct: 437 ALDYELKQSYNIAVVALSRDGHQVKKLLKVQILDENDNSPVFTESTVEITIEENNEPNAF 496

Query: 64  LLTV---TTNKPRDLRVKYWLSNDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATD 119
           L  +     +     +V Y+L  D    F++ S  G +S+   LD E ++ YRFTV A D
Sbjct: 497 LAKLYATDADSNESGQVSYFLGPDAPSYFTLDSVTGILSVSTILDREEKEKYRFTVKARD 556

Query: 120 TLMTTS---ATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPG-SVIGKVEAADGDK 175
               +    ATV+I+V++ ND +PRF    +  F+P     +  PG   IG +   D D 
Sbjct: 557 AGFPSRESVATVHITVLDKNDNNPRFISKDFSFFVP-----ENFPGFGEIGVISVTDADS 611

Query: 176 GDRVTLSLR-GPYEKMFSINDSGHI--SIVDLSALNTSTIQLVVVATDTGNP 224
           G    ++L  G    +F I++   +  + V L     S+  L V A D G+P
Sbjct: 612 GQNGWIALSIGNGSDIFVIDNGKGLLRAKVSLDREQQSSYTLWVEAVDGGDP 663



 Score = 47.4 bits (111), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 68/311 (21%), Positives = 128/311 (41%), Gaps = 55/311 (17%)

Query: 25  RYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSND 84
           R ++AT+ ++    +    +F   ++S    EN P  +  + V +    D     W++  
Sbjct: 562 RESVATVHITVLDKNDNNPRFISKDFSFFVPENFP-GFGEIGVISVTDADSGQNGWIALS 620

Query: 85  YGERFSI----SRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVND 137
            G    I    + +G +     LD E + SY   V A D     ++++A + I +++VND
Sbjct: 621 IGNGSDIFVIDNGKGLLRAKVSLDREQQSSYTLWVEAVDGGDPTLSSTAKITILLLDVND 680

Query: 138 WDPRFRYPQ----YELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSL-----RGPYE 188
             P   +PQ    Y L LP        PGS + +V A D D G    ++      RGP  
Sbjct: 681 NPPMVLFPQSNMSYLLVLPST-----LPGSPVTEVYAVDKDTGMNAVIAYSIIGRRGPKP 735

Query: 189 KMFSIND-SGHISIVDLSALNTSTI-QLVVVATDTGNPPRQASVPAIMHF---------- 236
           + F I+  +G+I++ +   +N   + +L+V  +D G P    S   +  F          
Sbjct: 736 ESFRIDPITGNITLEEALMINDCGLYRLLVKVSDHGYPEPLFSTVMVNLFVNDTVTNESY 795

Query: 237 -----------------PEAIVQQASSKLNSGTSSTVLIILGVVLIVLGFVIILLILYI- 278
                            P+  ++ +  ++ S + +  L+ L ++ +    ++ L+ +YI 
Sbjct: 796 IETLLKKEPDINIEEKEPQIAMEPSQKEMESDSCTPTLVTLSIICLGSVILVTLMGMYIC 855

Query: 279 ---HKNKHTKN 286
               KN H  N
Sbjct: 856 LRKGKNDHRIN 866


>gi|75072038|sp|Q6WXV7.1|PC11X_PONPY RecName: Full=Protocadherin-11 X-linked; Short=Protocadherin-11;
           AltName: Full=Protocadherin on the X chromosome;
           Short=PCDH-X; Flags: Precursor
 gi|32966126|gb|AAP92138.1| protocadherin X long isoform [Pongo pygmaeus]
          Length = 1347

 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 63/195 (32%), Positives = 93/195 (47%), Gaps = 20/195 (10%)

Query: 45  FSKNEYSVSALENLPVNYV--LLTVTTNKPRDLRVKYWLSNDYGERFSISRQ-GDISLMQ 101
           F+ NEY+    ENLP +    L+TVT     D         D  + F+I  Q G I    
Sbjct: 570 FTHNEYNFYVPENLPRHGTVGLITVTDPDYGDNSAVTLSILDENDDFTIDSQTGVIRPNI 629

Query: 102 CLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYP----QYELFLPHI 154
             D E ++SY F V A D      ++SA V I+VV+VND  P F  P     YEL LP  
Sbjct: 630 SFDREKQESYTFYVKAEDGGRVSRSSSAKVTINVVDVNDNKPVFIVPPSNYSYELVLP-- 687

Query: 155 PLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-DSGHISIVDLSALNTS 210
                 PG+V+ +V A D D G    +    + G    +F+I+ ++G+I++++   +   
Sbjct: 688 ---STNPGTVVFQVIAVDNDTGMNAEVRYSIVGGNTRDLFAIDQETGNITLMEKCDVTDL 744

Query: 211 TIQLVVV-ATDTGNP 224
            +  V+V A D G P
Sbjct: 745 GLHRVLVKANDLGQP 759



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/114 (32%), Positives = 61/114 (53%), Gaps = 10/114 (8%)

Query: 76  RVKYWLSNDYGERFSISRQ-GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNIS 131
            + Y L  D    FS+ R+ G +++++ LD E ED Y FT+ A D     +T++ TV +S
Sbjct: 500 EINYLLGPDAPPEFSLDRRTGMLTVVKKLDREKEDKYLFTILAKDNGVPPLTSNVTVFVS 559

Query: 132 VVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDR--VTLSL 183
           +++ ND  P F + +Y  ++P     +L     +G +   D D GD   VTLS+
Sbjct: 560 IIDQNDNSPVFTHNEYNFYVPE----NLPRHGTVGLITVTDPDYGDNSAVTLSI 609



 Score = 37.7 bits (86), Expect = 8.3,   Method: Compositional matrix adjust.
 Identities = 36/139 (25%), Positives = 67/139 (48%), Gaps = 15/139 (10%)

Query: 103 LDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADL 159
           LD E +D+Y   V   D      +++A + +SV + ND  P F+  + E+ +P     + 
Sbjct: 207 LDREEKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVFKETEIEVSIPE----NA 262

Query: 160 TPGSVIGKVEAADGDKGDRVTLS------LRGPYEKMFSIN-DSGHISIVD-LSALNTST 211
             G+ + ++ A D D G+   +       +     ++F +N  +G I+I + L    T  
Sbjct: 263 PVGTSVTQLHATDADIGENAKIHFSFSNLVSNIARRLFHLNATTGLITIKEPLDREETPN 322

Query: 212 IQLVVVATDTGNPPRQASV 230
            +L+V+A+D G  P +A V
Sbjct: 323 HKLLVLASDGGLMPARAMV 341


>gi|432847530|ref|XP_004066068.1| PREDICTED: protocadherin-23-like [Oryzias latipes]
          Length = 3252

 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/144 (31%), Positives = 76/144 (52%), Gaps = 10/144 (6%)

Query: 89   FSISR-QGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQY 147
            F+I R  G I+L Q LD+E +  Y   V+A+D++  TS  V + V++VND  P F    Y
Sbjct: 2282 FTIDRYTGLITLTQALDHEAQKEYTLKVWASDSIHHTSGEVKVQVLDVNDNAPVFTQVSY 2341

Query: 148  ELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR---GPYEKMFSINDSGHI-SIVD 203
            ++ +  +  A+    +++  V A D D G    ++ R    P +  +   D+G + +   
Sbjct: 2342 KVEMSELASAE----TLVLTVSATDRDSGLNGKITYRLLSSPLQGFYIQPDTGSVFTSKP 2397

Query: 204  LSAL-NTSTIQLVVVATDTGNPPR 226
            L A+ NT+ I L+V A D G+P R
Sbjct: 2398 LKAITNTNPIHLLVEARDGGDPVR 2421



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 58/203 (28%), Positives = 93/203 (45%), Gaps = 15/203 (7%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDL---RVKYWLSNDYGE-RFSI-SRQGDISL 99
            FS   Y  S +E L     +L V+   P +     V Y L+ D  +  FSI +  G I  
Sbjct: 1821 FSFRSYRASVVEGLSAGSEVLRVSAFDPDEGPNGDVTYSLTEDGNQGAFSIDAFTGVIRT 1880

Query: 100  MQCLDYETEDSYRFTVYATDTL----MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIP 155
             + LD E+   Y   V A+D+     +++  +V+I V +VND  P      ++ ++    
Sbjct: 1881 TKSLDRESRAQYTLRVVASDSCSQGPLSSVVSVSIQVEDVNDNIPICDQNPFDAWVS--- 1937

Query: 156  LADLTPGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSIN-DSGHISIVDLSALNTSTIQ 213
                 P  ++  V A DGD+G+  T+  R    E +F IN +SG IS+        S  +
Sbjct: 1938 -TRTPPNQILTTVTATDGDEGENGTVEFRLYDEENLFDINSESGEISLRRRVRAGFSGRR 1996

Query: 214  LVVVATDTGNPPRQASVPAIMHF 236
            L VV +D GNP   ++   ++H 
Sbjct: 1997 LQVVVSDRGNPALTSNCLVLIHL 2019



 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 55/180 (30%), Positives = 89/180 (49%), Gaps = 15/180 (8%)

Query: 67   VTTNKPRDLRVKYWLSNDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDT---LM 122
            V  +  ++ ++ Y L +D G+ F I +R G+I     LD E    +   V  TD     +
Sbjct: 1105 VDKDSGKNSQLSYILLSD-GKFFRINARTGEIINWVALDRERHGQHTLKVMVTDQGHPRL 1163

Query: 123  TTSATVNISVVNVNDWDPRFRY-PQYELFLPHIPLADLTPGSVIGKVEAADGDKGDR--V 179
              +ATV+I + ++ND  P+FR+ P  +    H+  AD   GSV+  + A D D G+   V
Sbjct: 1164 NATATVHILITDINDNSPQFRHIPASKELSIHMQ-ADAPAGSVVTNMFATDLDAGENGTV 1222

Query: 180  TLSL--RGPYEKMFSIN-DSGHISIVDLSALNTSTIQLV-VVATDTGNPPRQASVPAIMH 235
            T SL   G     F ++ +SG I +  L   NT    ++ V A D G  P++ +  A++H
Sbjct: 1223 TYSLMTEGDAVGHFEVDSESGEIRMTQLFTQNTKQHYILKVTAKDGGVSPQENT--AVLH 1280



 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 65/233 (27%), Positives = 96/233 (41%), Gaps = 30/233 (12%)

Query: 11   ITLVVRAIQYDNQDRYALATLIVS-KAGTSLRE----LQFSKNEYSVSALENLPVNYVLL 65
            +TL+V   Q   +D  A  TL+   + G + R+    +Q   ++   +   N  + Y L 
Sbjct: 952  LTLLVDVDQKAAEDNLAFETLVYQVEIGEAYRKDSRVIQVRAHQTWGARTSNTDLTYSLE 1011

Query: 66   TVTTNKPRDLRVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDTLM--- 122
            T     P   RV               + G + L   LD+E E  +RF V AT T     
Sbjct: 1012 TEPGFPPAPFRVH-------------PKTGWLYLSNSLDFEAESRFRFQVLATSTDASLE 1058

Query: 123  --TTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVT 180
              T +ATV + V+++ND  P F    Y   +        +P  ++G VEA D D G    
Sbjct: 1059 NTTATATVIVHVLDINDNAPVFGREVYYFTVSE----GSSPQGLVGTVEAVDKDSGKNSQ 1114

Query: 181  LS-LRGPYEKMFSIN-DSGH-ISIVDLSALNTSTIQLVVVATDTGNPPRQASV 230
            LS +     K F IN  +G  I+ V L         L V+ TD G+P   A+ 
Sbjct: 1115 LSYILLSDGKFFRINARTGEIINWVALDRERHGQHTLKVMVTDQGHPRLNATA 1167



 Score = 48.5 bits (114), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 57/197 (28%), Positives = 94/197 (47%), Gaps = 21/197 (10%)

Query: 43   LQFSKNEYSVSALENLPVNYVLLTVTTNKPRDL-----RVKYWL-SNDYGERFSISRQ-G 95
            LQF+   Y+VS  EN      +  V   + RD      R+ Y + S +    FSI+R  G
Sbjct: 2026 LQFTNMVYNVSVKENSRAGTWIAKV---EARDQTINSQRITYSIFSGNENHIFSINRHTG 2082

Query: 96   DISLMQ--CLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
            DI + +   LD+E +   +  V     L T    V+I+++++ND  P+F +  Y+  +  
Sbjct: 2083 DIRVQKDNYLDFEVDPHMQLVVLGDSGLQTAYCRVSITLLDINDNAPQFEHSSYKTSVWE 2142

Query: 154  IPLADLTPGSVIGKVEAADGDKG--DRVTLS-LRGPYEKMFSINDSGHI--SIVDLSALN 208
              + +    + I +V A+D D G   ++  S L G     F ++  G I  + V L    
Sbjct: 2143 GQVLN----TYIMQVFASDADSGVNGQIEYSILSGNNNGAFILDSLGGILATNVALDREI 2198

Query: 209  TSTIQLVVVATDTGNPP 225
            TS+ +LV+ A+D G PP
Sbjct: 2199 TSSYKLVLQASDKGTPP 2215



 Score = 46.6 bits (109), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 32/92 (34%), Positives = 43/92 (46%), Gaps = 6/92 (6%)

Query: 87   ERFSIS-RQGDISLMQCLDYETEDSYRFTVYATDTLMTTSAT-VNISVVNVNDWDPRFRY 144
            E F+I    GDI   Q  DYE E  Y F V A D    T+ T V + +  V+++ P F  
Sbjct: 2721 EAFAIDPLTGDIHTRQTFDYERESVYCFVVEARDKGDKTATTRVQVLIKGVDEFSPVFAQ 2780

Query: 145  PQYELFLPHIPLADLTPGSVIGKVEAADGDKG 176
             +Y   LP      +  G ++G V A D D G
Sbjct: 2781 NKYHFLLPE----HIKTGEIVGFVMAVDQDGG 2808



 Score = 44.7 bits (104), Expect = 0.079,   Method: Compositional matrix adjust.
 Identities = 37/138 (26%), Positives = 68/138 (49%), Gaps = 12/138 (8%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKP-----RDLRVKYWLSNDYGERFSISRQGDISL 99
           F K  Y++S  E+LP+   ++ +T          D+R     +N  G      + G ++ 
Sbjct: 444 FEKEVYTISVAEDLPLGSSVIQMTARDADEGPNADVRFSILKTNQDGLIRIDPQSGLVTT 503

Query: 100 MQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
              LD E+++   F V A D     ++++ATV++++ +VND +P F+   Y + +P    
Sbjct: 504 AAALDRESQEELWFLVVAADGGEPTLSSTATVSVTLEDVNDNEPVFQQQLYSVSIPE--H 561

Query: 157 ADLTPGSVIGKVEAADGD 174
           +D+  GS   +V A D D
Sbjct: 562 SDV--GSCFLQVVATDAD 577



 Score = 43.5 bits (101), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 53/202 (26%), Positives = 92/202 (45%), Gaps = 27/202 (13%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRDL----RVKYWLS---NDYGERFSISRQ-GD 96
           F++ EY  S  E+ PV   +  +    P DL    RV Y ++   +D    FSI+   G 
Sbjct: 228 FNQTEYHTSIHEDAPVGSFVCQIHATDP-DLGDNGRVTYEINRRQSDLNHVFSINETTGV 286

Query: 97  ISLMQCLDYETEDSYRFTVYATDTLMT---TSATVNISVVNVNDWDPRFRYPQYELFLPH 153
           + L Q LD+ET+  +   + A D       +S  V + V+N+ND  P        LFL  
Sbjct: 287 VYLNQKLDFETQPFHELIIRARDNGAQPEYSSTFVGVKVLNINDNSPTITV----LFLSE 342

Query: 154 IPLADLTPGSVIG----KVEAADGD-KGDRVTLSLRGPYEKMFSINDSGHISIV-----D 203
              A ++  + +G    ++  +D D + ++++++L G   K F++  +           +
Sbjct: 343 TGEALVSEAASVGDYVARISLSDPDLEEEKISVTLEGGDGK-FTLKQTDDFLYALCVHSE 401

Query: 204 LSALNTSTIQLVVVATDTGNPP 225
           L        +L V ATD+G+PP
Sbjct: 402 LDREEEDLYELRVKATDSGSPP 423



 Score = 43.5 bits (101), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 66/226 (29%), Positives = 101/226 (44%), Gaps = 18/226 (7%)

Query: 13   LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVT-TNK 71
            + VRA+ +      +  TL V     + +   FS+  Y  S  EN      ++ V+ T+ 
Sbjct: 1580 ITVRAVDHGAPQLSSTQTLTVKVGDVNDQAPVFSEIIYEASVAENRDAGEPVVRVSATDI 1639

Query: 72   PRDLRVKYWLSNDYG---ERFSIS-RQGDISLMQCLDYETEDSYRFTVYATDTLM---TT 124
              +     W S   G   E FSI+   G I+    LD E +  +   V A D+ +   + 
Sbjct: 1640 DSEENAVVWYSLLPGPGYELFSINPYSGVITTNSRLDREQQSHFMLRVQARDSGLRPLSG 1699

Query: 125  SATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTL--S 182
            +ATV  SV++ ND  P F    + + LP     +L PG VI   +A D D+ +  T+  S
Sbjct: 1700 TATVLCSVLDDNDNPPVFMQSSFTIRLPE----NLLPG-VIHTAQAFDPDQEENSTIYYS 1754

Query: 183  LRGP-YEKMFSIN-DSGHISIVD-LSALNTSTIQLVVVATDTGNPP 225
            L G  YE +F++N  +G IS    L    T    L + A D+G  P
Sbjct: 1755 LLGEDYEGLFTVNSQTGAISSTRVLDREETENYTLTIKALDSGPIP 1800



 Score = 41.2 bits (95), Expect = 0.79,   Method: Compositional matrix adjust.
 Identities = 47/146 (32%), Positives = 68/146 (46%), Gaps = 13/146 (8%)

Query: 89   FSIS-RQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRY 144
            FS+  R G + L   LDYET+  +R TV A D     ++++ T+ + V +VND  P F  
Sbjct: 1555 FSLEERTGLLFLSSPLDYETQQVHRITVRAVDHGAPQLSSTQTLTVKVGDVNDQAPVFSE 1614

Query: 145  PQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIND-SGHIS 200
              YE  +      +   G  + +V A D D  +   +    L GP  ++FSIN  SG I+
Sbjct: 1615 IIYEASVAE----NRDAGEPVVRVSATDIDSEENAVVWYSLLPGPGYELFSINPYSGVIT 1670

Query: 201  I-VDLSALNTSTIQLVVVATDTGNPP 225
                L     S   L V A D+G  P
Sbjct: 1671 TNSRLDREQQSHFMLRVQARDSGLRP 1696



 Score = 38.9 bits (89), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 41/154 (26%), Positives = 63/154 (40%), Gaps = 26/154 (16%)

Query: 88  RFSISRQGDISLMQC----LDYETEDSYRFTVYATDTL---MTTSATVNISVVNVNDWDP 140
           +F++ +  D     C    LD E ED Y   V ATD+    +++   + + V++ ND  P
Sbjct: 383 KFTLKQTDDFLYALCVHSELDREEEDLYELRVKATDSGSPPLSSEMVLLLKVLDANDCLP 442

Query: 141 RFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSGHIS 200
            F    Y + +      DL  GS + ++ A D D+G    +        +   N  G I 
Sbjct: 443 VFEKEVYTISVAE----DLPLGSSVIQMTARDADEGPNADVRF-----SILKTNQDGLIR 493

Query: 201 IVDLSALNTSTIQL----------VVVATDTGNP 224
           I   S L T+   L          +VVA D G P
Sbjct: 494 IDPQSGLVTTAAALDRESQEELWFLVVAADGGEP 527


>gi|336244957|gb|AEI28396.1| FAT tumor suppressor-like protein 4, partial [Struthio camelus]
          Length = 254

 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 53/186 (28%), Positives = 90/186 (48%), Gaps = 10/186 (5%)

Query: 45  FSKNEYSVSALENLPVNYVLLTV-TTNKPRDLRVKYWLS-NDYGERFSISR-QGDISLMQ 101
           FS+  YS    EN+   Y + TV  +    +  + Y ++  D    F+ISR  G I+   
Sbjct: 4   FSQGMYSFVVFENVATGYHVGTVFASTMDLNTNISYLITRGDQRGMFAISRVTGQITTAS 63

Query: 102 CLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTP 161
            +D E +  Y+  V A+   +T    VNI+V ++ND  P F +    + +    + +   
Sbjct: 64  VIDREEQAFYQLKVVASGGAITGDTVVNITVKDLNDNSPHFIHTVESVNV----VENWKA 119

Query: 162 GSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIND-SGHISIVDLSALNTSTIQLVVVA 218
           G  I +  A D D+G    V  SL+   + +FSIN+ +G IS+     +N  + Q+ ++A
Sbjct: 120 GHTIFQARALDPDEGVNGMVLYSLKQNPKGLFSINEKTGAISLTGPLDINAGSYQVEILA 179

Query: 219 TDTGNP 224
           +D G P
Sbjct: 180 SDMGVP 185


>gi|79158861|gb|AAI07999.1| Pcdh1g18 protein [Danio rerio]
          Length = 868

 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 51/193 (26%), Positives = 90/193 (46%), Gaps = 16/193 (8%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRDLR--VKYWLSN---DYGERFSI-SRQGDIS 98
           FS++ Y  S +EN P + V++ V+     +    ++Y+  +        FSI +  GD+ 
Sbjct: 223 FSQSSYKTSIVENAPKSTVVIRVSATDADESSHGIQYYFEHATPTVKALFSIDADSGDVK 282

Query: 99  LMQCLDYETEDSYRFTVYATD-TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLA 157
           +   +DYE    ++  V A D   +T S+ + I V++VND  P+     +   +      
Sbjct: 283 VTGQIDYEKHKQFKIKVKAKDHGGLTDSSEIIIDVIDVNDNKPKITIMSFSSAVSE---- 338

Query: 158 DLTPGSVIGKVEAADGDKGDRVTLS----LRGPYEKMFSI-NDSGHISIVDLSALNTSTI 212
           D  PG+VI  +   D D GD   +S    L  P++ + S+ N    ++  +L    T+  
Sbjct: 339 DAAPGTVIAMINVQDLDSGDNSKISCSIDLNSPFKIISSLTNYYNLVTDSELDREQTAEY 398

Query: 213 QLVVVATDTGNPP 225
            + + A D GNPP
Sbjct: 399 NITITAVDGGNPP 411



 Score = 42.4 bits (98), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 60/229 (26%), Positives = 97/229 (42%), Gaps = 36/229 (15%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTTNKPRDL------RVKYWLSND------YGERFSI 91
           QF +  Y+    EN P +  +LTV   K  D+      +V Y+L +            SI
Sbjct: 431 QFVQESYNAFIAENNPPSTTILTV---KAEDMDWGPNAKVSYFLIDADLNGAPLASYISI 487

Query: 92  -SRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQY 147
            S  G +   +  DYE   S++  V A D     ++++ T+NI + + ND  P+  YP  
Sbjct: 488 NSESGVVYAEKSFDYEQLKSFKMQVKAQDGGSPPLSSNVTLNIIIQDQNDNAPQVLYP-- 545

Query: 148 ELFLPHIPLADLTP-----GSVIGKVEAADGDKGDRVTLSL---RGPYEKMFSIN-DSGH 198
            +      +A++ P     G ++ KV A D D G    LS    +     +F +   +G 
Sbjct: 546 -VQTGASVVAEIVPRAADVGYLVTKVVAVDVDSGQNAWLSYKLQKAADRALFEVGLQNGE 604

Query: 199 ISIV-DLSALNTSTIQLVVVATDTGNPPRQA----SVPAIMHFPEAIVQ 242
           I  V  ++  +    +L VV  D G P R A    +V     FPE + +
Sbjct: 605 IRTVRQVTDKDAVKQKLTVVVEDNGQPSRSAVVSINVAVADSFPEVLSE 653


>gi|395814683|ref|XP_003780874.1| PREDICTED: protocadherin Fat 3 isoform 1 [Otolemur garnettii]
          Length = 4557

 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 64/197 (32%), Positives = 92/197 (46%), Gaps = 17/197 (8%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPR---DLRVKYWLSNDYGERFSI-SRQGDISLM 100
            FS + Y+    EN     +L  V    P    + +V Y L++  G  FSI S  G + L 
Sbjct: 3131 FSSDHYNACVYENTATKALLTRVQAVDPDVGINRKVVYSLADSAGGVFSIDSWSGIVILE 3190

Query: 101  QCLDYETEDSYRFTVYATD----TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
            Q LD E + SY  +V ATD      +++ A V I+V+++ND  P F    Y + +P    
Sbjct: 3191 QPLDREQQPSYNISVQATDQSPGQSLSSLAIVTITVLDINDNPPVFERRDYLVTVPE--- 3247

Query: 157  ADLTPGSVIGKVEAADGDKGD--RVTLSLR-GPYEKMFSIN-DSGHISIVD-LSALNTST 211
             D +PG+ +  V A   D G    +T  +R G  +  FSIN  +G IS+ + L       
Sbjct: 3248 -DTSPGTQVLAVFATSKDIGTNAEITYLIRSGNEQGKFSINPKTGGISVSEVLDYELCKR 3306

Query: 212  IQLVVVATDTGNPPRQA 228
              LVV A D G P   A
Sbjct: 3307 FYLVVEAKDGGTPALSA 3323



 Score = 58.9 bits (141), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 68/204 (33%), Positives = 95/204 (46%), Gaps = 25/204 (12%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDL----RVKYWLSNDYGERFSISR-QGDISL 99
            F    YSV  LE+LP+  V+  + T+ P DL    +V+Y L NDY  RF I +  G I L
Sbjct: 936  FIPTSYSVKVLEDLPIGTVIAWLETHDP-DLGLGGQVRYSLVNDYNGRFEIDKASGAIRL 994

Query: 100  MQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIP---- 155
             + LDYE +  Y  TV A D          +S+ +V+  +         L  P+ P    
Sbjct: 995  SKELDYEKQQFYNLTVRAKDKGRP------VSLSSVSFVEVEVVDVNENLHTPYFPDFAV 1048

Query: 156  LADLTPGSVIG----KVEAADGDKG--DRVTLSLR-GPYEKMFSIND-SGHISIVD-LSA 206
            +  +   S IG    +V A D D G    +  S+R G     FSI+D SG I+  D L  
Sbjct: 1049 VGSVKENSRIGTSVLQVTARDEDPGRDGEIQYSIRDGSGLGRFSIDDESGVITAADILDR 1108

Query: 207  LNTSTIQLVVVATDTGNPPRQASV 230
              TS+  L V ATD G  P  +++
Sbjct: 1109 ETTSSYWLTVYATDRGVVPLYSTI 1132



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 42/137 (30%), Positives = 60/137 (43%), Gaps = 8/137 (5%)

Query: 103  LDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPG 162
            LD E +D Y   + ATD L  T A V ++V +VND  P      Y    P     D+   
Sbjct: 2990 LDREEQDMYFLNITATDGLFVTQAMVEVTVSDVNDNSPVCDQVAYTALFPE----DIPSN 3045

Query: 163  SVIGKVEAADGDKGDR--VTLSLRGPYEKMFSIN-DSGHI-SIVDLSALNTSTIQLVVVA 218
             +I KV A D D G    +  SL GP    F ++ +SG + ++  L         L+  A
Sbjct: 3046 KIILKVSAKDADIGSNGDIRYSLYGPGNNEFFLDPESGELKTLALLDRERVPVYNLIARA 3105

Query: 219  TDTGNPPRQASVPAIMH 235
            TD G    Q+ +  I+ 
Sbjct: 3106 TDGGGRFCQSDIRLILE 3122



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 59/193 (30%), Positives = 92/193 (47%), Gaps = 16/193 (8%)

Query: 43  LQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLS-NDYGERFSIS-RQGDISLM 100
           ++F K  Y V   E  P   V++ V  + P  L V+Y LS  +  E F I+ R G I   
Sbjct: 374 VRFEKEMYDVRVSEFSPPGVVVVIVKLS-PEPLDVEYKLSPGEDAEYFKINPRSGLIVTA 432

Query: 101 QCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFL-PHIPLADL 159
           Q L+   ++ Y+  V  T+      A V I + + ND  P F+  QY+ ++   +P+   
Sbjct: 433 QPLNTVKKEVYKLEV--TNKEGDLRAQVVIGIEDANDHTPEFQQAQYDTYVNESVPV--- 487

Query: 160 TPGSVIGKVEAADGDKGDR--VTLSLRGPYEKMFSIND-SGHISIVDLSALNTS--TIQL 214
             G+ I  V A D DKG+   +T S+       F+IN  +G IS  +     +S  T + 
Sbjct: 488 --GTSILTVSAFDKDKGENGYITYSIASLNLLPFAINQFTGVISTTEELDFESSPETYRF 545

Query: 215 VVVATDTGNPPRQ 227
           +V A+D G+P R 
Sbjct: 546 IVRASDWGSPYRH 558



 Score = 48.5 bits (114), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 63/214 (29%), Positives = 95/214 (44%), Gaps = 28/214 (13%)

Query: 53   SALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYG-ERFSISRQ-GDISLMQCLDYET 107
            S  EN  +   +L VT    +  RD  ++Y + +  G  RFSI  + G I+    LD ET
Sbjct: 1051 SVKENSRIGTSVLQVTARDEDPGRDGEIQYSIRDGSGLGRFSIDDESGVITAADILDRET 1110

Query: 108  EDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSV 164
              SY  TVYATD     + ++  V I V +VND  P    P   ++ P +        SV
Sbjct: 1111 TSSYWLTVYATDRGVVPLYSTIEVYIEVEDVNDNAPLTSEP---IYYPAVMENSPKDVSV 1167

Query: 165  IGKVEAADGDKGDRVTLSLR---GPYEKMFSIN-DSGHISIVD--LSALNTSTIQLVVVA 218
            I +++A D D      L+ R   G  +  F+IN  +G I+     L     +   L V  
Sbjct: 1168 I-QIQAEDPDSSSSEKLTYRITSGNPQNFFAINIKTGLITTTSRKLDREQQAEHFLEVTV 1226

Query: 219  TDTGNPPRQASVPAIM----------HFPEAIVQ 242
            TD G  P+Q+++  ++           FPE + Q
Sbjct: 1227 TDGGPSPKQSTIWVVVQVQDENDNKPQFPEKVYQ 1260



 Score = 45.1 bits (105), Expect = 0.064,   Method: Compositional matrix adjust.
 Identities = 40/146 (27%), Positives = 66/146 (45%), Gaps = 9/146 (6%)

Query: 95   GDISLMQCLDYETEDSYRFTVYATDTL-MTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
            G ++  + LDYE   SY+  + AT+   M ++ATVNI +V+ ND  P F + QY   L  
Sbjct: 1721 GVVTTRKALDYERTSSYQLIIQATNMAGMASNATVNIQIVDENDNAPVFLFSQYSGSLSE 1780

Query: 154  IP-----LADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSGHISIVDLSALN 208
                   + +L    ++ +   AD ++   +   +     K F   DS   +I  ++ L+
Sbjct: 1781 AAPVNSIVRNLDNSPLVIRATDADSNRNALLVYQIVESMAKKFFTVDSSTGAIRTIANLD 1840

Query: 209  TSTI---QLVVVATDTGNPPRQASVP 231
              TI      V   D+G+P   A  P
Sbjct: 1841 HETIAHFHFHVHVRDSGSPQLTAESP 1866



 Score = 42.0 bits (97), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 41/146 (28%), Positives = 72/146 (49%), Gaps = 23/146 (15%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDL------RVKYWLSNDYG-----ERFSI-S 92
            F  + Y    +E +PV   L  V   + +D+      +V Y L +D       E FSI S
Sbjct: 2814 FETSSYETIIMEGMPVGTKLTQV---RAQDVDWGANGQVTYSLHSDSQPEKVMEAFSIDS 2870

Query: 93   RQGDISLMQCLDYETEDSYRFTVYATDT----LMTTSATVNISVVNVNDWDPRFRYPQYE 148
              G IS ++ LD+ET+  + F+V A+D      ++++  V++ V ++ND  P F    +E
Sbjct: 2871 NTGWISTLKDLDHETDPEFTFSVLASDLGEAFSLSSTTVVSVKVTDINDNAPVF---AHE 2927

Query: 149  LFLPHIPLADLTPGSVIGKVEAADGD 174
            ++  ++  +D  PG V+  +   D D
Sbjct: 2928 VYRGNVKESD-PPGEVVAVLSTWDRD 2952



 Score = 41.6 bits (96), Expect = 0.62,   Method: Compositional matrix adjust.
 Identities = 53/203 (26%), Positives = 94/203 (46%), Gaps = 17/203 (8%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSN-DYGERFSIS-RQGDISLMQC 102
            F K  Y+ S  E++ V+  +L++    P    + Y + + D  ++F+I    G + ++  
Sbjct: 2186 FDKPFYTASIDEDIRVDTPILSINATSPEGQGIIYIIIDGDPFKQFNIDFDTGVLKVVSP 2245

Query: 103  LDYETEDSYRFTVYATDTLMTTSA--TVNISVVNVNDWDPRFRYPQYELFLPHIPLADLT 160
            LDYE    Y+ T+ A+D+L    A  TV++ V +VND  P F  P Y   L    L    
Sbjct: 2246 LDYEATSVYKLTIRASDSLTGARAEVTVDLLVNDVNDNPPIFDQPTYNTTLSEASLI--- 2302

Query: 161  PGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSGHIS-----IVDLSALNTSTIQ-- 213
             G+ + +V + D D  +   +  +   +  ++  D  HI      I+    L+  ++Q  
Sbjct: 2303 -GTPVLQVVSTDADSENNKMVHYQ-IVQDTYNSTDYFHIDSTSGLILTARMLDHESVQHC 2360

Query: 214  -LVVVATDTGNPPRQASVPAIMH 235
             L V +TD+G P   + V   +H
Sbjct: 2361 TLKVRSTDSGFPSLSSEVLVHIH 2383



 Score = 40.8 bits (94), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 63/215 (29%), Positives = 96/215 (44%), Gaps = 25/215 (11%)

Query: 43   LQFSKNEYSVSALEN-LPVNYVLLTVTTNKPRDLRVKYWLSNDYGERFSI-SRQGDISLM 100
            L F+++ YS S  EN   +  V +        +  +KY + N  G +F I S  G I   
Sbjct: 1980 LHFTQSFYSTSISENNTNITKVAIVNAVGNRLNEPLKYSILNP-GNKFKIKSTSGVIQTT 2038

Query: 101  QC-LDYETEDSYRFTVYAT---DTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
                D E ++ Y   V A+   D L      V +S+ ++ND  P F      + LP+   
Sbjct: 2039 GVPFDREEQEIYELVVEASRELDLLRVARVVVRVSIEDINDNSPVF------VGLPYYAA 2092

Query: 157  A--DLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIN-DSGHISIVDLSALNTST 211
               D  PG++I +V A D DKG    VT  L+  Y   F IN +SG++ + +    + S 
Sbjct: 2093 VQVDAEPGTLIYQVTAIDKDKGANGEVTYVLQDDY-GHFEINPNSGNVILKEAFNSDLSN 2151

Query: 212  IQ--LVVVATDTGNPPRQASVPAIMHFPEAIVQQA 244
            I+  + ++A D G P    SV      P  IV +A
Sbjct: 2152 IEYGVTILAKDGGKPSLSTSV----ELPITIVNKA 2182



 Score = 40.8 bits (94), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 53/196 (27%), Positives = 92/196 (46%), Gaps = 22/196 (11%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKY----WLSNDYGERFSISRQ-GDISL 99
            F++++YS +  E+  +   + T+     +++R          N+ G  F I ++ G I L
Sbjct: 2708 FTQSQYSFAIAEDTAIGTTVDTLRVLPSQNVRFSTVNGDRPENNRGGVFIIEQETGTIKL 2767

Query: 100  MQCLDYETEDSYRFTVYATDTL----MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIP 155
             + LD+E   ++ F   AT  L    +  +  V+I V+++ND  P F    YE  +    
Sbjct: 2768 DKRLDHEATPAFHFKAAATVPLDKIDIVFTVDVDIKVLDLNDNKPVFETSSYETII---- 2823

Query: 156  LADLTPGSVIGKVEAADGDKG--DRVTLSLRG---PYEKM--FSIN-DSGHISIV-DLSA 206
            +  +  G+ + +V A D D G   +VT SL     P + M  FSI+ ++G IS + DL  
Sbjct: 2824 MEGMPVGTKLTQVRAQDVDWGANGQVTYSLHSDSQPEKVMEAFSIDSNTGWISTLKDLDH 2883

Query: 207  LNTSTIQLVVVATDTG 222
                     V+A+D G
Sbjct: 2884 ETDPEFTFSVLASDLG 2899



 Score = 39.3 bits (90), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 53/220 (24%), Positives = 90/220 (40%), Gaps = 19/220 (8%)

Query: 12   TLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVN-YVLLTVTTN 70
            +L+V+A+        + ATL +  +  +     F+   Y+    EN PV   +L  V T+
Sbjct: 3413 SLLVQAVDSGIPAMSSTATLNIDISDVNDNSPVFTPANYTAVIQENKPVGTSILQLVVTD 3472

Query: 71   K-------PRDLRVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDTLMT 123
            +       P    +   LS +  E F +   G +       +     Y   V A D+   
Sbjct: 3473 RDSFHNGPPFSFSI---LSGNEEEEFMLDPHGILRSAVVFQHTESPEYVLCVQAKDSGKP 3529

Query: 124  TSATVNISVVNVNDWDPRFRYPQ---YELFLPHIPLADLTPGSVIGKVEAADGDKGDRVT 180
              A+   S + V   +     P     E+F+  + + D  PG VIGK+ A D D  D +T
Sbjct: 3530 QQASR--SFIRVRVIEESIHKPTAIPLEIFI--VTMEDDFPGGVIGKIHATDQDMYDVLT 3585

Query: 181  LSLRGPYEKMFSINDSGHISIVDLSALNTSTIQLVVVATD 220
             +L+   + +F +N S    I+ L  L++    L V  +D
Sbjct: 3586 FALKSEQKSLFKVN-SHDGKIIALGGLDSGKYVLNVSVSD 3624



 Score = 38.9 bits (89), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 26/94 (27%), Positives = 44/94 (46%), Gaps = 4/94 (4%)

Query: 95   GDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHI 154
            G I + + LD E    Y  +V  TD        V I V++ ND  P F  P Y++ +   
Sbjct: 1413 GTIVIAKPLDAEQRSIYNMSVEVTDGTNVAVTQVFIKVLDNNDNGPEFSQPNYDVTISE- 1471

Query: 155  PLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYE 188
               D+ P + I ++EA D D+  +++ ++    E
Sbjct: 1472 ---DVLPDTEILQIEATDRDEKHKLSYTIHSSIE 1502



 Score = 38.5 bits (88), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 53/201 (26%), Positives = 80/201 (39%), Gaps = 18/201 (8%)

Query: 44   QFSKNEYSVSALEN-LPVNYVLLTVTTNKPRDLRVKYWLSNDYG----ERFSIS-RQGDI 97
            +FS+  Y V+  E+ LP   +L    T++    ++ Y + +        +F I    G +
Sbjct: 1459 EFSQPNYDVTISEDVLPDTEILQIEATDRDEKHKLSYTIHSSIESSSMRKFRIDPSTGVL 1518

Query: 98   SLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHI 154
               + LD+E +D +   V   D         A V ++V + ND  P F  P YE  +   
Sbjct: 1519 YTAERLDHEAQDKHILNVMVRDQEFPYRRNLARVIVNVEDANDHSPYFTNPLYEASV--- 1575

Query: 155  PLADLTPGSVIGKVEAADGDKGDRVTLSL---RGPYEKMFSINDSGHISIVDLSALNTST 211
                   GS + +V A D DKG+   L      G     F I     I  V      T+ 
Sbjct: 1576 -FESAALGSAVLQVTALDKDKGENAELIYTIEAGNTGNTFKIEPVLGIITVSKEPDMTTM 1634

Query: 212  IQLV--VVATDTGNPPRQASV 230
             Q V  V  TD G+PP  A+ 
Sbjct: 1635 GQFVLSVRVTDQGSPPMSATA 1655



 Score = 37.7 bits (86), Expect = 8.9,   Method: Compositional matrix adjust.
 Identities = 33/107 (30%), Positives = 56/107 (52%), Gaps = 10/107 (9%)

Query: 45   FSKNEYSVSALENL-PVNYVLLTVTTNKP--RDLRVKYWL--SNDYGERFSIS-RQGDIS 98
            F + +Y V+  E+  P   VL    T+K    +  + Y +   N+ G +FSI+ + G IS
Sbjct: 3236 FERRDYLVTVPEDTSPGTQVLAVFATSKDIGTNAEITYLIRSGNEQG-KFSINPKTGGIS 3294

Query: 99   LMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRF 142
            + + LDYE    +   V A D     ++  ATV++++ +VND  P+F
Sbjct: 3295 VSEVLDYELCKRFYLVVEAKDGGTPALSAVATVSVTLTDVNDNPPKF 3341



 Score = 37.7 bits (86), Expect = 9.8,   Method: Compositional matrix adjust.
 Identities = 58/232 (25%), Positives = 101/232 (43%), Gaps = 21/232 (9%)

Query: 9   QPITLV---VRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLL 65
           QP+  V   V  ++  N++    A +++     +    +F + +Y     E++PV   +L
Sbjct: 433 QPLNTVKKEVYKLEVTNKEGDLRAQVVIGIEDANDHTPEFQQAQYDTYVNESVPVGTSIL 492

Query: 66  TVTT---NKPRDLRVKYWLSNDYGERFSISR-QGDISLMQCLDYETE-DSYRFTVYATD- 119
           TV+    +K  +  + Y +++     F+I++  G IS  + LD+E+  ++YRF V A+D 
Sbjct: 493 TVSAFDKDKGENGYITYSIASLNLLPFAINQFTGVISTTEELDFESSPETYRFIVRASDW 552

Query: 120 ---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG 176
                      V I + NVND  P F     +  + +    D   G  I  V A D D+ 
Sbjct: 553 GSPYRHEREVNVTIRIGNVNDNSPLFEKVACQGVISY----DFPVGGHITAVSAIDIDEL 608

Query: 177 DRVTLS-LRGPYEKMFSIN-DSGHISIVDL---SALNTSTIQLVVVATDTGN 223
           + V    + G     F +N DSG + +      S +      L + ATD  N
Sbjct: 609 ELVKYKIISGNELGFFYLNPDSGVLQLKKSLLNSGVKNGNFALRITATDGEN 660


>gi|326671264|ref|XP_003199405.1| PREDICTED: protocadherin Fat 3-like, partial [Danio rerio]
          Length = 3394

 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 68/222 (30%), Positives = 104/222 (46%), Gaps = 21/222 (9%)

Query: 37   GTSLRELQFSKNEYSVSALENLPVNYVLLTV-TTNKPRDL--RVKYWLSNDYGE-RFSIS 92
            G +L    FS+  Y     EN P    ++ V  T++   +  ++ Y   ND G+ +F+I 
Sbjct: 2483 GANLYSPVFSQRFYLAEVRENAPAGSRVIQVRATDEDSGIFGQIMYSFINDLGKSQFNIG 2542

Query: 93   RQGDISLMQCLDYET--EDSYRFTVYATDTLMTTS-ATVNISVVNVNDWDPRFRYPQYEL 149
              G I+  Q LD E         TV A D     S  TV + + + ND  PRFR  +Y +
Sbjct: 2543 ADGLITTAQKLDRENPINRDIVLTVMALDGGGRASFCTVRVILADENDNAPRFRAMEYRV 2602

Query: 150  FLPHIPLADLTPGSVIGKVEAADGDKGD--RVTLSL----RGPYEKMFSIN-DSG-HISI 201
             +     A++  GS++ +++A D D GD  RV  SL    R P   +  I  DSG  ++ 
Sbjct: 2603 SIK----ANVPMGSLVTQIQAQDPDSGDNGRVAYSLYSEARLPLVDVLEIEPDSGWMVTK 2658

Query: 202  VDLSALNTSTIQLVVVATDTGNPPRQASVPAIMHF--PEAIV 241
              L+ L  + +   V ATD G P + + V A +H   P+A V
Sbjct: 2659 GSLAHLRGTVLSFFVKATDGGVPAKHSLVSAFIHVLPPDASV 2700



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 95/207 (45%), Gaps = 21/207 (10%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDLR----VKYWLSNDYGERFSI-SRQGDISL 99
            F    YS   LE+LP+  V+  + T  P D+     V+Y L ND+   F I S  G I +
Sbjct: 933  FIPKSYSCRVLEDLPIGAVIAWLQTQDP-DIGSGGWVRYSLPNDFNGTFKINSESGAIKV 991

Query: 100  MQCLDYETEDSYRFTVYATD----TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIP 155
             + LDYE +  Y  ++ A D      + + + + + +++VN+       P +  F     
Sbjct: 992  AKDLDYEKQQFYNLSLVAEDLGFPVKLRSESYLEVEIIDVNE---NLNEPYFSEFAVRGS 1048

Query: 156  LADLTP-GSVIGKVEAADGDKGD----RVTLSLRGPYEKMFSIN-DSGHISIVD-LSALN 208
            + + +  G+ + +V A D DKG     R +++ R    + FSI+ ++G I   D L    
Sbjct: 1049 VKENSRHGTSVLQVTAQDDDKGRDGVIRYSINARSGLGR-FSIDEETGMIYTADSLDCEA 1107

Query: 209  TSTIQLVVVATDTGNPPRQASVPAIMH 235
              +  L V ATD G  P  AS+   + 
Sbjct: 1108 QDSYWLTVYATDRGVVPLSASIEVFIQ 1134



 Score = 48.9 bits (115), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 66/212 (31%), Positives = 97/212 (45%), Gaps = 19/212 (8%)

Query: 39   SLRELQFSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYG-ERFSISRQ 94
            +L E  FS+     S  EN      +L VT    +K RD  ++Y ++   G  RFSI  +
Sbjct: 1034 NLNEPYFSEFAVRGSVKENSRHGTSVLQVTAQDDDKGRDGVIRYSINARSGLGRFSIDEE 1093

Query: 95   -GDISLMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELF 150
             G I     LD E +DSY  TVYATD     ++ S  V I V +VND  P    P Y  +
Sbjct: 1094 TGMIYTADSLDCEAQDSYWLTVYATDRGVVPLSASIEVFIQVEDVNDNAPLTSEPIYHSY 1153

Query: 151  LPHIPLADLTPGSVIGKVEAADGD---KGDRVTLSL-RGPYEKMFSIN-DSGHISIVD-- 203
            +      D++    + +V+A D D      R+T  +  G  +  FSI+ ++G I+     
Sbjct: 1154 VMENSPKDVS----VVRVQAQDPDVTASESRLTYRITAGNPQNFFSIDYNTGLITTTSRK 1209

Query: 204  LSALNTSTIQLVVVATDTGNPPRQASVPAIMH 235
            L     +   L V   D G   RQ++V  I+H
Sbjct: 1210 LDREQQAEHFLEVTVMDGGGIFRQSTVWVIVH 1241



 Score = 48.1 bits (113), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 62/231 (26%), Positives = 94/231 (40%), Gaps = 11/231 (4%)

Query: 12   TLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNK 71
            TL VRA         +  T  ++ + +     +F++ EY     EN+ V   ++ V    
Sbjct: 1635 TLTVRATDGGTPPLSSTTTCRIAISLSDFSSPKFAQQEYQAEITENVAVGTFVIIVCAIS 1694

Query: 72   PRDLRVKYWLSNDYGERFSISR-QGDISLMQCLDYETEDSYRFTVYATDTL-MTTSATVN 129
               L  +    ND   RF I+R  G I+  +  D+E   SY   + A +   + +S TV 
Sbjct: 1695 RSMLIYEIKEGNDE-RRFKINRYTGVITTQKDFDFEMTSSYILVIQAVNMAGIASSVTVC 1753

Query: 130  ISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGK---VEAADGDKGDRVTLSLRGP 186
            I VV+ ND  P F+   Y   +      +    +  GK   +EA D DK     L  +  
Sbjct: 1754 IQVVDENDNPPVFQDLTYTGTISEAAHVNSVVMTEDGKPLVIEATDADKNHNALLVFQIV 1813

Query: 187  YE--KMFSINDSGHISIVDLSALNTSTIQ---LVVVATDTGNPPRQASVPA 232
             E  K+F   DSG  S+  ++ L+  T       V   D G P   A  PA
Sbjct: 1814 EETAKLFFTVDSGTGSVRTIAKLDYETFSSFYFSVNVRDCGRPQLTAEKPA 1864



 Score = 47.8 bits (112), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 69/216 (31%), Positives = 99/216 (45%), Gaps = 33/216 (15%)

Query: 27   ALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTT------NKPRDLRVKYW 80
            AL T++V +A  S   L FS+  YS S LEN  VN   +++        N+P    +KY 
Sbjct: 1961 ALVTVLVREAMDS--GLLFSQTSYSSSVLEN-SVNITTVSIVNAVGNRLNEP----LKYT 2013

Query: 81   LSNDYGERFSIS-RQGDISLMQC-LDYETEDSYRFTVYAT---DTLMTTSATVNISVVNV 135
            L N  G  F+I    G I       D E ++ Y   V A+   D L     TV + V +V
Sbjct: 2014 LLN-AGTSFTIRPTSGVIQTTGVPFDREQQELYELVVEASREYDQLRVARVTVRVEVEDV 2072

Query: 136  NDWDPRFRYPQYELFLPHIPLA--DLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMF 191
            ND  P F      + LP+      D  PGS I +V A D DKG    V   L+  +   F
Sbjct: 2073 NDNAPEF------VGLPYYAAVQVDAQPGSSIFQVSATDLDKGINGAVYYELKENHPH-F 2125

Query: 192  SIND-SGHISIVDLSALNTSTIQ--LVVVATDTGNP 224
             +N  +G +++  +   + S ++  LVV+A D G P
Sbjct: 2126 EVNKLTGDLTLKKIFDADLSNVEYPLVVLARDAGYP 2161



 Score = 47.0 bits (110), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 62/201 (30%), Positives = 91/201 (45%), Gaps = 23/201 (11%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWL-SNDYGERFSIS-RQGDISLMQC 102
            F K+ Y +S  E++ V+  +L +    P    + Y +   D   +F I    G IS++  
Sbjct: 2181 FDKSFYGISVREDIGVSTPILCINATSPEGQNIIYTIVEGDPYFQFDIGFDSGVISVIYP 2240

Query: 103  LDYETEDSYRFTVYATDTL--MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLT 160
            LDYET  +YR T+ +TDTL    +   V+I VV+VND  P FR   Y   LP   +    
Sbjct: 2241 LDYETTSNYRLTIRSTDTLTGARSEVDVDIVVVDVNDNAPVFRNTSYSTTLPENTMI--- 2297

Query: 161  PGSVIGKVEAADGDKGDRVTLSLRGPYEKM---FSINDSGHISIVDLSALN--------T 209
             GS + ++ A D D      +S    YE +   F+  D  HI       L         T
Sbjct: 2298 -GSSVIRLLATDKDSEKNNVIS----YEILSDGFNSTDYFHIDSTSGLLLTARLLDYELT 2352

Query: 210  STIQLVVVATDTGNPPRQASV 230
            S+   +V ATD G+P +   V
Sbjct: 2353 SSFSFIVRATDNGSPSQNCEV 2373



 Score = 45.8 bits (107), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 51/190 (26%), Positives = 86/190 (45%), Gaps = 13/190 (6%)

Query: 13   LVVRAIQYDNQDRYALATLIVS---KAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTT 69
            L ++AI      +++ A L V    K   S   L+F+   Y+ + +EN  V Y  + V +
Sbjct: 1325 LTIKAIDNGTPQKWSTARLHVEWIRKPVPSPLALRFTAAVYNFTVVENAKV-YESVGVVS 1383

Query: 70   NKPRDLRVKYWLSNDYGERFSISRQ-GDISLMQCLDYETEDSYRFTVYATDTLMTTSATV 128
                +  + + +  +Y   F I R  G I + + LD ET+  Y  TV  TD   T +  +
Sbjct: 1384 VWQTETPLWFDIIGNYDGPFDIQRGIGTIVIARPLDAETQSLYNMTVQVTDGTNTATTQI 1443

Query: 129  NISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYE 188
             I V + ND  P F    YE+ +     AD    + + +V A D D+  +++ S+    +
Sbjct: 1444 YIKVSDSNDNTPIFSEHTYEVLVSEDTPAD----TEVLRVRARDRDERAKLSYSIHSSVD 1499

Query: 189  ----KMFSIN 194
                +MF IN
Sbjct: 1500 PASMRMFRIN 1509



 Score = 44.3 bits (103), Expect = 0.088,   Method: Compositional matrix adjust.
 Identities = 44/132 (33%), Positives = 64/132 (48%), Gaps = 16/132 (12%)

Query: 82   SNDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVND 137
            S DY   F I S  G +   + LDYE   S+ F V ATD          TV + + +VND
Sbjct: 2328 STDY---FHIDSTSGLLLTARLLDYELTSSFSFIVRATDNGSPSQNCEVTVTVFLSDVND 2384

Query: 138  WDPRFRYPQYELFLPHIPLADLTP-GSVIGKVEAADGDKGDRVTL--SLRGPYEKMFSIN 194
              P F  P YE F     +++L P G ++  ++A+D D  D  +L  S+    EKM  + 
Sbjct: 2385 NPPSFNQPLYEAF-----VSELAPRGHIVTCIQASDLDSSDAESLRYSILSGDEKMNFVI 2439

Query: 195  DSGHISIVDLSA 206
            DS    ++ LS+
Sbjct: 2440 DS-QTGVISLSS 2450



 Score = 42.7 bits (99), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 39/136 (28%), Positives = 59/136 (43%), Gaps = 8/136 (5%)

Query: 91   ISRQGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELF 150
            I  +  + + + LD E +D Y   + A+D L  T   V ++V++ ND  P     +Y+  
Sbjct: 2980 IQGEWKVYVKRPLDREEQDQYLLNITASDGLFVTRIGVEVTVMDANDNSPICNQAEYKAS 3039

Query: 151  LPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRG-PYEKMFSINDSGHISIVD-LSA 206
             P     D+   + I KV A D D G    +  SL G   E  F   +SG +     L  
Sbjct: 3040 FPE----DVAVNTAILKVGATDLDTGANAEIQYSLFGIGVEDFFMDANSGELKTAALLDR 3095

Query: 207  LNTSTIQLVVVATDTG 222
              T+   L+  ATD G
Sbjct: 3096 ERTAGYMLIAQATDGG 3111



 Score = 39.7 bits (91), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 41/156 (26%), Positives = 67/156 (42%), Gaps = 30/156 (19%)

Query: 43  LQFSKNEYSVSALENLPVNYVLLT-------VTTNKPRDLRVKYWLSNDYG----ERFSI 91
           +QF+ + Y+ +  EN      + T       ++   P D+       +D G    E F +
Sbjct: 40  IQFTSSIYNATIYENCAARTYIRTDVKMGIVLSKLGPLDIEYSIESGDDEGLFQAEEFML 99

Query: 92  SRQGDISLMQC---------LDYETEDSYRFTVYAT-DTLMTTSATVNISVVNVNDWDPR 141
              GD   ++          L+ E +D+Y  TV AT    +  S TVN+ ++++ND  P 
Sbjct: 100 ---GDFCFLRIRTSGGSAAILNREVQDNYTLTVRATAGGGLEASVTVNVQIMDMNDLRPL 156

Query: 142 FRYPQYELFLPH-IPLADLTPGSVIGKVEAADGDKG 176
           F    Y + +P   PL     GS + +V A D D G
Sbjct: 157 FSPTSYAINIPESTPL-----GSNVAQVTATDADIG 187


>gi|326673644|ref|XP_002664482.2| PREDICTED: protocadherin-11 X-linked [Danio rerio]
          Length = 1098

 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 82/312 (26%), Positives = 134/312 (42%), Gaps = 52/312 (16%)

Query: 14  VVRAIQYDNQDRYALATLIVSKAGTSLRE---------------LQFSKNEYSVSALENL 58
           VV+ +  + Q++Y+   +      T L+                  F+  EY+    ENL
Sbjct: 524 VVKRLDREKQEKYSFTVIARDNGTTPLQSNVTVKLIVQDQNDNSPAFTHPEYNFYVPENL 583

Query: 59  PV--NYVLLTVTTNKPRDLRVKYWLSNDYGERFSIS-RQGDISLMQCLDYETEDSYRFTV 115
           P+     L+TVT     D  V      +  + F I  + G I      D E + SY F V
Sbjct: 584 PLYGTVGLITVTDADAGDNAVVTLSIINGKDNFIIDPKTGVIKPNITFDREQQSSYTFVV 643

Query: 116 YATDT-LMTTS--ATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAAD 172
            A D  LM T+  A V I+VV+VND  P F  P        +P ++ +PGSV+ +V A D
Sbjct: 644 KAVDAGLMQTTSYAKVTINVVDVNDNRPVFVIPSSNYSYDLVP-SNTSPGSVVTRVFAID 702

Query: 173 GDKGDRVTL-------SLRGPYEKMFSIND-SGHISIVD-LSALNTSTIQLVVVATDTGN 223
            D G    L       SLRG    +F+I+  +G+I++ + + A +    +LVV   D G 
Sbjct: 703 NDTGMNAELQYSIIGGSLRG----LFTIDKTTGNITLQEKIVAADQGLHRLVVKVKDLGQ 758

Query: 224 PPRQASVPAIMHFPEAIVQQAS---SKL--------------NSGTSSTVLIILGVVLIV 266
           P    ++  +  F    V  A+    +L              N  T  T   ++ V+ I+
Sbjct: 759 PESLHAIALVHLFVNDTVSNATFIQEQLRKSLETPLERNIGDNDVTPQTNGYVIVVIAII 818

Query: 267 LGFVIILLILYI 278
            G + ++L++++
Sbjct: 819 AGTMTVILVIFV 830



 Score = 58.5 bits (140), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 37/110 (33%), Positives = 60/110 (54%), Gaps = 10/110 (9%)

Query: 79  YWLSNDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVN 134
           Y L  D  + F+I SR G +S+++ LD E ++ Y FTV A D   T + ++ TV + V +
Sbjct: 503 YSLGPDAPDGFNIDSRSGILSVVKRLDREKQEKYSFTVIARDNGTTPLQSNVTVKLIVQD 562

Query: 135 VNDWDPRFRYPQYELFLP-HIPLADLTPGSVIGKVEAADGDKGDRVTLSL 183
            ND  P F +P+Y  ++P ++PL        +G +   D D GD   ++L
Sbjct: 563 QNDNSPAFTHPEYNFYVPENLPLY-----GTVGLITVTDADAGDNAVVTL 607



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 55/187 (29%), Positives = 84/187 (44%), Gaps = 16/187 (8%)

Query: 56  ENLPVN-YVLLTVTTNKPRDLRVKYWLSNDYGERFSI----SRQGDISLMQCLDYETEDS 110
           EN P+N  + L   T++  DL  K     D+   F +    + Q  +     LDYET   
Sbjct: 372 ENAPLNTKIALITVTDRDSDLNGKVTCYTDHDVPFRLKPVFNDQFLLETAAPLDYETTRE 431

Query: 111 YRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGK 167
           Y   + A+D+    + TSA V I + + ND  P F  P+ +L +P     +  PG+ + K
Sbjct: 432 YAIRIVASDSGKPPLNTSAMVLIKIKDENDNVPVFPQPEIQLSIPE----NNDPGTQLIK 487

Query: 168 VEAADGDKGDR--VTLSLRGPYEKMFSIND-SGHISIVD-LSALNTSTIQLVVVATDTGN 223
           + A D D G    +  SL       F+I+  SG +S+V  L           V+A D G 
Sbjct: 488 ISATDADSGSNALIIYSLGPDAPDGFNIDSRSGILSVVKRLDREKQEKYSFTVIARDNGT 547

Query: 224 PPRQASV 230
            P Q++V
Sbjct: 548 TPLQSNV 554


>gi|50417959|gb|AAH77259.1| Unknown (protein for IMAGE:4958923), partial [Xenopus laevis]
          Length = 908

 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 58/195 (29%), Positives = 90/195 (46%), Gaps = 19/195 (9%)

Query: 50  YSVSALE-NLPVNYVL-------LTVTTNKPRDLRVKYWLSNDYGERFSIS-RQGDISLM 100
           +S +A+E   P N VL       L    +  ++  + Y L       FSI    GDI++ 
Sbjct: 507 FSQAAVEVAFPENNVLGERVATVLATDADSGKNAEIAYSLEPPMDGIFSIHPDTGDITVN 566

Query: 101 QCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLA 157
             LD E  D Y F V A D    ++  + +V + V + ND +P+F    +  ++      
Sbjct: 567 IILDREQTDRYEFRVVAKDKGIPVLQGATSVVVQVADRNDNEPKFMQDVFTFYVKE---- 622

Query: 158 DLTPGSVIGKVEAADGDKGDRVTLSLRGPYEK-MFSI-NDSGHI-SIVDLSALNTSTIQL 214
           +L P S +G V   D DKG    +SL    +  +FSI N++G I S V     + ++   
Sbjct: 623 NLQPNSPVGMVTVMDSDKGRNAEMSLFIEEDSDIFSIENETGTIYSTVSFDREHQTSYTF 682

Query: 215 VVVATDTGNPPRQAS 229
            V A D G+PPR A+
Sbjct: 683 RVKAVDGGDPPRSAT 697



 Score = 41.6 bits (96), Expect = 0.66,   Method: Compositional matrix adjust.
 Identities = 39/154 (25%), Positives = 66/154 (42%), Gaps = 30/154 (19%)

Query: 103 LDYETEDSYRFTVYATDTL---MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADL 159
           LD E  DSY  T+   D      ++ + + + + +VND  PRF    YE  L      + 
Sbjct: 238 LDREQRDSYELTLRVRDGGEPPRSSQSILRVLITDVNDNSPRFEKSVYEADLAE----NS 293

Query: 160 TPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSI------------NDSGHISI---VDL 204
            PG+ I ++ AAD D G      + G  E +F               +SG +S+   +D 
Sbjct: 294 APGTPILQLRAADYDVG------VNGQIEYVFGAATESVRRLLRLDENSGWLSVLHRIDR 347

Query: 205 SALNTSTIQLVVVATDTGNPPRQASVPAIMHFPE 238
             +N   ++  V+A D G PP+      +++  +
Sbjct: 348 EEVN--QLRFTVMARDRGQPPKTDKATVVLNIKD 379


>gi|288557274|ref|NP_001165662.1| protocadherin 7 precursor [Xenopus laevis]
 gi|2852363|gb|AAC41270.1| NF-protocadherin [Xenopus laevis]
          Length = 1035

 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 58/196 (29%), Positives = 90/196 (45%), Gaps = 19/196 (9%)

Query: 50  YSVSALE-NLPVNYVL-------LTVTTNKPRDLRVKYWLSNDYGERFSISRQ-GDISLM 100
           +S +A+E   P N VL       L    +  ++  + Y L       FSI    GDI++ 
Sbjct: 507 FSQAAVEVAFPENNVLGERVATVLATDADSGKNAEIAYSLEPPMDGIFSIHPDTGDITVN 566

Query: 101 QCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLA 157
             LD E  D Y F V A D    ++  + +V + V + ND +P+F    +  ++      
Sbjct: 567 IILDREQTDRYEFRVVAKDKGIPVLQGATSVVVQVADRNDNEPKFMQDVFTFYVKE---- 622

Query: 158 DLTPGSVIGKVEAADGDKGDRVTLSLRGPYEK-MFSI-NDSGHI-SIVDLSALNTSTIQL 214
           +L P S +G V   D DKG    +SL    +  +FSI N++G I S V     + ++   
Sbjct: 623 NLQPNSPVGMVTVMDSDKGRNAEMSLFIEEDSDIFSIENETGTIYSTVSFDREHQTSYTF 682

Query: 215 VVVATDTGNPPRQASV 230
            V A D G+PPR A+ 
Sbjct: 683 RVKAVDGGDPPRSATA 698


>gi|345788489|ref|XP_853733.2| PREDICTED: LOW QUALITY PROTEIN: protocadherin-16 [Canis lupus
           familiaris]
          Length = 3295

 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 62/191 (32%), Positives = 96/191 (50%), Gaps = 21/191 (10%)

Query: 56  ENLPVNYVLLTVTTNKPRDLRVKYW-LSNDYGE-RFSISRQGDISLMQC----LDYETED 109
           E  P   ++  ++ + P D    +  +S + GE  F++S Q  +  + C    LD E  D
Sbjct: 374 EAAPPGQLVARISVSDPDDGDFAHVNVSLEGGEGHFALSTQDSVIYLVCVARQLDREERD 433

Query: 110 SYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLT-PGSVI 165
           +Y   V ATD+    +   AT  + V +VND  P F     +L+ P  PL ++  PGS +
Sbjct: 434 AYNLRVTATDSGSPPLRAEATFVLHVTDVNDNAPTF---DRQLYRPE-PLPEVALPGSFV 489

Query: 166 GKVEAADGDKGD--RVTLSLR-GPYEKMFSINDSGHISIVDLSALN---TSTIQLVVVAT 219
            +V A D D+G   +VT SL  G + + FSI+ +  I I   ++L+       QL+VVAT
Sbjct: 490 VRVMARDPDQGSNGQVTYSLAPGAHTRWFSIDPTSGI-ITTAASLDYELEPQPQLIVVAT 548

Query: 220 DTGNPPRQASV 230
           D G PP  +S 
Sbjct: 549 DGGLPPLASSA 559



 Score = 57.8 bits (138), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 58/197 (29%), Positives = 84/197 (42%), Gaps = 12/197 (6%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKP---RDLRVKYWLSNDYGERFSIS-RQGDISLM 100
            F    YSV   E+ P   +LL +  + P    + RV Y+L       F +    G++   
Sbjct: 1852 FPVPAYSVEVPEDAPAGTLLLQLQAHDPDAGANGRVTYYLGTGAAGAFLLEPSSGELRTA 1911

Query: 101  QCLDYETEDSYRFTVYATDTL----MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
              LD E   SY F+V A D      ++T+  V I+V +VND  P F      L LP    
Sbjct: 1912 IALDREQCSSYAFSVSAVDGAAAGPLSTTVPVTITVRDVNDHAPTFPTSPLRLRLPRPGP 1971

Query: 157  ADLTPGSVIGKVEAADGDKGDRVTL--SLRGPYEKMFSIND-SGHISIVDLS-ALNTSTI 212
            +  TP   +  + A D D G   ++   L G      +++  +G I +     AL     
Sbjct: 1972 SLSTPTLALATLRAEDRDAGANASILYRLAGTPPPGTTVDSYTGEIRVARSPVALGPRDR 2031

Query: 213  QLVVVATDTGNPPRQAS 229
             L VVATD G P R A+
Sbjct: 2032 VLFVVATDLGRPARSAT 2048



 Score = 54.7 bits (130), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 68/256 (26%), Positives = 110/256 (42%), Gaps = 46/256 (17%)

Query: 11   ITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLT---- 66
            + +V+ A  +    R A AT+ V     +     F+   Y V+  E+LP    LLT    
Sbjct: 2445 VDVVLEARDHGMPGRAARATVHVQLQDQNDHTPSFTLPHYRVAVTEDLPPGSTLLTLEAT 2504

Query: 67   ---------------VTTNKPRDLRVKYWLSNDYGERFSISRQ--GDISLMQCLDYETED 109
                           V+ N+ R  +++  L+ + GE   +  +  G + L++ LD+E+  
Sbjct: 2505 DADGSRTHATVDYSIVSGNRGRVFQLEPRLA-ETGEGGGLGPRALGCLVLLESLDFESLT 2563

Query: 110  SYRFTVYATDTLM---TTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIG 166
             Y  TV A D      +++  V ++V++VND  P F    Y + +P     D   G+ + 
Sbjct: 2564 QYNLTVAAADRGQPPRSSAVPVTVTVLDVNDNPPVFTRASYRMAVPE----DTPVGAELL 2619

Query: 167  KVEAADGDKGD----RVTLSLRGPYEKMFSIND-SGHISIV-DLSALNTSTIQLVVVATD 220
             VEA+D D G     R TLS   P   +F +++ SG + +   L     +  QLVV A D
Sbjct: 2620 HVEASDADPGPHGLVRFTLSSGDP-SGLFELDENSGALRLARPLDCETQARHQLVVQAAD 2678

Query: 221  TGNPPRQASVPAIMHF 236
                      PA  HF
Sbjct: 2679 ----------PAGAHF 2684



 Score = 54.3 bits (129), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 73/260 (28%), Positives = 125/260 (48%), Gaps = 38/260 (14%)

Query: 8    LQPIT--LVVRA-IQYDNQDRYALATLIVS--------KAGTS-LRELQFSKNEYS---- 51
            L+P T  L VRA +  + Q+ Y L  + VS        + GT+ +R    ++N++S    
Sbjct: 1044 LEPQTGWLWVRAALDREAQELYTLKVMAVSGSKAELGQQTGTATVRVSILNQNDHSPRLS 1103

Query: 52   -----VSALENLP----VNYVLLTVTTNKPRDLRVKYWLS--NDYGERFSISRQ-GDISL 99
                 ++  EN P    V  V  T   + P   R+ Y L   ++  + F I  Q G+++ 
Sbjct: 1104 EEPTFLAVAENQPPGTSVGRVFATDRDSGPNG-RLTYSLRPLSEDSKAFRIHPQTGEMTT 1162

Query: 100  MQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYEL--FLPHI 154
            +Q LD E + SY+  V   D      +T+ TV+I+V+++ND  P F          LP  
Sbjct: 1163 LQTLDRERQSSYQLLVQVQDGGSPPRSTTGTVHIAVLDLNDNSPSFLQASGAAGGGLPVQ 1222

Query: 155  PLADLTPGSVIGKVEAADGDKGDRVTL--SLRGPYEKMFSIN-DSGH-ISIVDLSALNTS 210
                + PG+++  ++A D D+G+  T+  +L GP  ++FS++  SG  ++   L      
Sbjct: 1223 VPDRVPPGTLVTTLQAKDPDEGENGTILYTLTGPGSELFSLHPHSGELLTAAPLIRAERP 1282

Query: 211  TIQLVVVATDTGNPPRQASV 230
               L + A D G+PPR +S+
Sbjct: 1283 HYVLTLSAHDQGSPPRSSSL 1302



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 62/215 (28%), Positives = 88/215 (40%), Gaps = 28/215 (13%)

Query: 31   LIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDY-GERF 89
            ++V   GT      F    Y V           +L V    P    + Y L+ D     F
Sbjct: 983  VVVQDLGTRGLAPHFDSPTYRVDLPSGTTPGTQVLQVRAQAPDGGPITYHLAADGPSSPF 1042

Query: 90   SISRQ-GDISLMQCLDYETEDSYRFTVYATDT------LMTTSATVNISVVNVNDWDPRF 142
             +  Q G + +   LD E ++ Y   V A           T +ATV +S++N ND  PR 
Sbjct: 1043 GLEPQTGWLWVRAALDREAQELYTLKVMAVSGSKAELGQQTGTATVRVSILNQNDHSPRL 1102

Query: 143  -RYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYE--KMFSINDSG 197
               P +     + P     PG+ +G+V A D D G   R+T SLR   E  K F I    
Sbjct: 1103 SEEPTFLAVAENQP-----PGTSVGRVFATDRDSGPNGRLTYSLRPLSEDSKAFRI---- 1153

Query: 198  HISIVDLSALNT------STIQLVVVATDTGNPPR 226
            H    +++ L T      S+ QL+V   D G+PPR
Sbjct: 1154 HPQTGEMTTLQTLDRERQSSYQLLVQVQDGGSPPR 1188



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 62/197 (31%), Positives = 91/197 (46%), Gaps = 24/197 (12%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTN----KPRDLRVKYWLSN-DYGERFSISR-QGDIS 98
            F++  Y ++  E+ PV   LL V  +     P  L V++ LS+ D    F +    G + 
Sbjct: 2599 FTRASYRMAVPEDTPVGAELLHVEASDADPGPHGL-VRFTLSSGDPSGLFELDENSGALR 2657

Query: 99   LMQCLDYETEDSYRFTVYATDTLMT--TSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
            L + LD ET+  ++  V A D        A V I V +VND  P F      L L    L
Sbjct: 2658 LARPLDCETQARHQLVVQAADPAGAHFALAPVTIEVQDVNDHGPVF-----PLSLLSTSL 2712

Query: 157  AD-LTPGSVIGKVEAADGDKGD----RVTLSLRGP---YEKMFSINDS-GHI-SIVDLSA 206
            A+   PG+++  + A DGD G     R TL   GP     + F++N S G + + V    
Sbjct: 2713 AENQPPGTLVTTLHAIDGDAGAFGRLRYTLLEAGPGPEGREAFALNSSTGELRARVAFDY 2772

Query: 207  LNTSTIQLVVVATDTGN 223
             +T + QL+V A D GN
Sbjct: 2773 EHTGSFQLLVGAADAGN 2789



 Score = 52.4 bits (124), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 48/149 (32%), Positives = 65/149 (43%), Gaps = 15/149 (10%)

Query: 89   FSISRQGD-ISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQY 147
            FSI R G  +SL   LD+E  D Y   + A D      A + + V +VND  P F    Y
Sbjct: 2319 FSIGRYGGRLSLTGPLDFEQRDRYHLQLLAHDGPHEGHANLTVFVEDVNDNAPAFSQSLY 2378

Query: 148  EL-FLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDSGH-----I 199
            ++  L H P     PGS I  V A D D G    ++  L  P E  FS++ +       +
Sbjct: 2379 QVTLLEHTP-----PGSAILSVSATDQDSGANGHISYHLASPAEG-FSVDPNNGTLFTTV 2432

Query: 200  SIVDLSALNTSTIQLVVVATDTGNPPRQA 228
              V L       + +V+ A D G P R A
Sbjct: 2433 GTVALGHEGPGVVDVVLEARDHGMPGRAA 2461



 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 46/147 (31%), Positives = 65/147 (44%), Gaps = 7/147 (4%)

Query: 13   LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKP 72
            L V A  + +  R A   L VS A  +     F + EYSV   EN P    LLT+    P
Sbjct: 1614 LTVVASDHGSPPRSATQLLTVSVADVNDEAPAFQQQEYSVLLRENSPPGTSLLTLRATDP 1673

Query: 73   RDLRVKYWLSND--YGERFSISRQ-GDISLMQCLDYETEDSYRFTVYATD---TLMTTSA 126
             DL     ++     GE FS+    G ++ ++ LD E ++    TVYA D     + T  
Sbjct: 1674 -DLGANGQVTYGGISGESFSLDPDTGVLTTLRALDREEQEEINLTVYARDRGSPPLLTHV 1732

Query: 127  TVNISVVNVNDWDPRFRYPQYELFLPH 153
            TV ++V + ND  P F      L +P 
Sbjct: 1733 TVRVAVEDENDHAPTFGSAHLSLEVPE 1759



 Score = 45.4 bits (106), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 55/218 (25%), Positives = 92/218 (42%), Gaps = 37/218 (16%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGERFSISRQGDISLMQ 101
            FS++ Y V+ LE+ P    +L+V+    +   +  + Y L++   E FS+          
Sbjct: 2373 FSQSLYQVTLLEHTPPGSAILSVSATDQDSGANGHISYHLASP-AEGFSVDPNNGTLFTT 2431

Query: 102  ----CLDYETEDSYRFTVYATDTLM---TTSATVNISVVNVNDWDPRFRYPQYELFLPHI 154
                 L +E        + A D  M      ATV++ + + ND  P F  P Y + +   
Sbjct: 2432 VGTVALGHEGPGVVDVVLEARDHGMPGRAARATVHVQLQDQNDHTPSFTLPHYRVAV--- 2488

Query: 155  PLADLTPGSVIGKVEAADGDKGDRVTLSL-----RGPYEKMFSI-------NDSGHIS-- 200
               DL PGS +  +EA D D G R   ++      G   ++F +        + G +   
Sbjct: 2489 -TEDLPPGSTLLTLEATDAD-GSRTHATVDYSIVSGNRGRVFQLEPRLAETGEGGGLGPR 2546

Query: 201  ----IVDLSALNTSTI---QLVVVATDTGNPPRQASVP 231
                +V L +L+  ++    L V A D G PPR ++VP
Sbjct: 2547 ALGCLVLLESLDFESLTQYNLTVAAADRGQPPRSSAVP 2584



 Score = 45.4 bits (106), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 37/106 (34%), Positives = 53/106 (50%), Gaps = 9/106 (8%)

Query: 76  RVKYWLSNDYGER-FSIS-RQGDISLMQCLDYETEDSYRFTVYATD---TLMTTSATVNI 130
           +V Y L+     R FSI    G I+    LDYE E   +  V ATD     + +SATV++
Sbjct: 504 QVTYSLAPGAHTRWFSIDPTSGIITTAASLDYELEPQPQLIVVATDGGLPPLASSATVSV 563

Query: 131 SVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG 176
           ++ +VND +P+F+   Y   LP        PG+   +V A D D G
Sbjct: 564 ALQDVNDNEPQFQRTFYNASLPE----GTQPGTCFLQVTATDADSG 605



 Score = 42.7 bits (99), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 59/199 (29%), Positives = 88/199 (44%), Gaps = 23/199 (11%)

Query: 42  ELQFSKNEYSVSALENLPVNYVLLTVTT----NKPRDLRVKYWLSNDYGER----FSI-S 92
           E QF +  Y+ S  E        L VT     + P  L + Y L    G      F I +
Sbjct: 572 EPQFQRTFYNASLPEGTQPGTCFLQVTATDADSGPFGL-LSYSLGAGLGAPGSPPFRIDA 630

Query: 93  RQGDISLMQCLDY-ETEDSYRFTVYATDTLMTTSAT-VNISVVNVNDWDPRFRYP-QYEL 149
             GD+   + LD  +   S+ FTV A D     S   V + V + ND  P+F YP +Y  
Sbjct: 631 HTGDVCTTRTLDRDQGPSSFDFTVTAVDGGGLKSMVYVKVFVSDENDNPPQF-YPWEYAA 689

Query: 150 FLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIND-SGHISIV-DL 204
            L     A  TPG+ + +V A D D+G    L+   L G    +F++++ SG +++   L
Sbjct: 690 SL----SAQSTPGTAVLRVRAHDPDQGPHGRLTYHILAGNNPPLFALDEHSGLLTVAWPL 745

Query: 205 SALNTSTIQLVVVATDTGN 223
           +    S +QL + A D G 
Sbjct: 746 ARRANSVVQLEIGAQDGGG 764



 Score = 41.2 bits (95), Expect = 0.88,   Method: Compositional matrix adjust.
 Identities = 27/94 (28%), Positives = 48/94 (51%), Gaps = 9/94 (9%)

Query: 95   GDISLMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFL 151
            G+   M+ LD E E +++  + A D     ++ +  V ++V++ ND  P F  P Y + +
Sbjct: 1802 GEFGTMRPLDREVEPAFQLRIEARDGGQPALSATLLVTVTVLDANDHAPAFPVPAYSVEV 1861

Query: 152  PHIPLADLTPGSVIGKVEAADGDKG--DRVTLSL 183
            P     D   G+++ +++A D D G   RVT  L
Sbjct: 1862 PE----DAPAGTLLLQLQAHDPDAGANGRVTYYL 1891



 Score = 38.9 bits (89), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 45/163 (27%), Positives = 71/163 (43%), Gaps = 22/163 (13%)

Query: 89  FSI-SRQGDISLMQCLDYETEDSYRFTVYATDTLMTT---SATVNISVVNVNDWDPRFRY 144
           FSI +  G + L + LD+E    +   V A D        SA V ++V + ND  P    
Sbjct: 302 FSIDAHTGLLRLERPLDFEQRRVHELVVQARDGGAHPELGSAFVTVNVRDANDNQPSMTV 361

Query: 145 PQYELFL-----PHIPLADLTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSINDSG 197
               +FL     P +  A   PG ++ ++  +D D GD   V +SL G  E  F+++   
Sbjct: 362 ----IFLSADGSPRVSEA-APPGQLVARISVSDPDDGDFAHVNVSLEG-GEGHFALSTQD 415

Query: 198 HISIV-----DLSALNTSTIQLVVVATDTGNPPRQASVPAIMH 235
            +  +      L         L V ATD+G+PP +A    ++H
Sbjct: 416 SVIYLVCVARQLDREERDAYNLRVTATDSGSPPLRAEATFVLH 458



 Score = 38.1 bits (87), Expect = 8.1,   Method: Compositional matrix adjust.
 Identities = 31/105 (29%), Positives = 50/105 (47%), Gaps = 8/105 (7%)

Query: 126 ATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSL 183
           A V + + +VND  P F  P+  + LP     +  PG+ I  + A D D G   RVT +L
Sbjct: 875 ARVRVLLDDVNDNSPAFPAPEDTVLLP----PNTAPGTPIYTLRALDPDAGINSRVTFTL 930

Query: 184 RGPYEKMFSIND-SGHISIVDLSALNTSTI-QLVVVATDTGNPPR 226
                  F+++  +GH+ ++           +L + A D G+PPR
Sbjct: 931 LAGGGGAFTVDPTTGHVRLMGPLGPPGGPAHELELEARDGGSPPR 975


>gi|196016717|ref|XP_002118209.1| hypothetical protein TRIADDRAFT_62266 [Trichoplax adhaerens]
 gi|190579184|gb|EDV19285.1| hypothetical protein TRIADDRAFT_62266 [Trichoplax adhaerens]
          Length = 3089

 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 57/186 (30%), Positives = 84/186 (45%), Gaps = 11/186 (5%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWL-SNDYGERFSISRQGDISLMQC 102
           +F K+ Y+    E+  V   ++ VT        + Y + S +   RF I  QG I L   
Sbjct: 715 KFPKSIYNADVREDEKVGRQIVQVTATDVDSKTIYYSIVSGNVRSRFGIDPQGYIYLAAP 774

Query: 103 LDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRF-RYPQYELFLPHIPLADLTP 161
           +DY  E  Y   V A+D L+ ++ATV + V++ N+  P F R    +++       D   
Sbjct: 775 IDYLREKEYTLVVQASDLLLNSTATVKMRVIDTNNHAPTFDRAYTADIY------EDTAI 828

Query: 162 GSVIGKVEAADGDKGDRVTLSLR--GPYEKMFSINDSGHISI-VDLSALNTSTIQLVVVA 218
           G+VI  V A D D  +   L+ R   P  +    + SG ISI   L     ST  L V A
Sbjct: 829 GTVILTVTAKDADANENARLTYRIVTPVREFKIDSKSGAISIAAALDRETRSTFSLEVRA 888

Query: 219 TDTGNP 224
           +D G P
Sbjct: 889 SDNGVP 894



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 59/199 (29%), Positives = 88/199 (44%), Gaps = 19/199 (9%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGER----FSI-SRQGDISL 99
           F+++ YS S  EN P    +LTV+        + Y ++     R    F I S  G I  
Sbjct: 297 FTQSSYSSSIFENEPSGTTVLTVSVRDKSAPGLTYSMAAVGDLRSNSLFGINSVSGAIYT 356

Query: 100 MQCLDYETEDSYRFTVYAT----DTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIP 155
           +  LD E    ++FTV AT     T + +  +V I V++ ND  PRF  P Y++ +P   
Sbjct: 357 VNYLDREEIAKHQFTVTATVNDGTTTLFSRVSVTIDVLDRNDNAPRFESPSYQVSIPE-- 414

Query: 156 LADLTPGSVIGKVEAADGDKGD--RVTLSL--RGPYEKMFSINDSGHISIVDLSALN--T 209
             D+  G+   +V A D D     RVT S+         F +  +    I+D S     T
Sbjct: 415 --DIPIGTTALQVRAQDNDASSNARVTYSIVNSAGINSAFRVGVTSGAIIIDRSLDREIT 472

Query: 210 STIQLVVVATDTGNPPRQA 228
               L + ATD+G  P+ A
Sbjct: 473 DRYHLEIQATDSGTTPKFA 491



 Score = 52.4 bits (124), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 49/195 (25%), Positives = 92/195 (47%), Gaps = 11/195 (5%)

Query: 12   TLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTV---T 68
            T+VV AI      +++ AT+ ++         +F   EY     EN P    ++ +   +
Sbjct: 989  TIVVTAIDKGRPPKHSFATVKITITDVKDSPPEFYPKEYDAYLPENSPAGTTVVQLNATS 1048

Query: 69   TNKPRDLRVKYWLSNDYGER-FSI-SRQGDISLMQCLDYETEDSYRFTVYATDTLMTTSA 126
             ++  +  + Y  ++ +  R F + S  G ++ ++ LD+E   +Y+  V A      T  
Sbjct: 1049 KDEGTNAFITYEATSGFEPRIFHVNSSNGVVTTLRPLDFEIRRTYQIRVRAQSPPFFTET 1108

Query: 127  TVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS-LRG 185
            TV I +++VND  P  +   Y   L + P  D  P + +GK+ A D D  D +T + ++G
Sbjct: 1109 TVTIHIIDVNDNPPTIQ--NYTFLLNYFP--DYYPTASVGKLNATDPDISDTLTFAIIQG 1164

Query: 186  PYEKMFSIND-SGHI 199
              +++  +N  SG I
Sbjct: 1165 NNDRLLQLNRTSGEI 1179



 Score = 51.6 bits (122), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 63/199 (31%), Positives = 100/199 (50%), Gaps = 18/199 (9%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWLSNDYGERFSIS-RQGDISL 99
           QF++  Y V+  E+  +N ++ TV    P +     ++Y L+     +F+I+   G I+L
Sbjct: 508 QFTQKNYKVTIAEDAKINTLVTTVRATDPDNDDNADIRYSLAGQ--NKFTINPTNGRITL 565

Query: 100 MQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
           +  LDYE + SY   V A D     ++ + TV +SV +VND  PRF    Y+  +     
Sbjct: 566 IASLDYEQQQSYTLDVTAKDRGRPSLSNTTTVVVSVTDVNDNQPRFSSNVYQASVKE--- 622

Query: 157 ADLTPGSVIGKVEA--ADGDKGDRVTLSL-RGPYEKMFSIND-SGHISIVD-LSALNTST 211
            D+  GS +  V A  AD D+  +V  S+ RG  E  F+++  SG IS    L+  + S 
Sbjct: 623 -DIPVGSSVLPVHAFDADSDQNKQVRYSIQRGSEEIPFNVDSVSGVISTARPLNYESKSQ 681

Query: 212 IQLVVVATDTGNPPRQASV 230
               ++ATD G PP  +S 
Sbjct: 682 YSFFIIATDGGTPPLSSSA 700



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 52/192 (27%), Positives = 84/192 (43%), Gaps = 18/192 (9%)

Query: 50   YSVSALENLPVNYVLLTVTTNKP---RDLRVKYWLSNDYGERFSISRQGDISLMQCLDYE 106
            Y+    E+  +  V+LTVT        + R+ Y +     E    S+ G IS+   LD E
Sbjct: 818  YTADIYEDTAIGTVILTVTAKDADANENARLTYRIVTPVREFKIDSKSGAISIAAALDRE 877

Query: 107  TEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGS 163
            T  ++   V A+D     ++    V IS+++ ND  P F  P Y   +      D+  G+
Sbjct: 878  TRSTFSLEVRASDNGVPSLSGRTDVVISILDSNDNAPVFSQPSYNASIAE----DVEIGT 933

Query: 164  VIGKVEAADGDKG----DRVTLSLRGPYEKMFSINDSGHISIVDLSALNTSTI---QLVV 216
             + +V A D D+G        L+        F+I+ S  + I    AL+  T+    +VV
Sbjct: 934  RVLQVAATDKDEGVNQQIHFELAENENGNGTFAIDGSTGV-IRTAKALDRETVPEYTIVV 992

Query: 217  VATDTGNPPRQA 228
             A D G PP+ +
Sbjct: 993  TAIDKGRPPKHS 1004


>gi|170032323|ref|XP_001844031.1| cadherin EGF LAG seven-pass G-type receptor 1 [Culex
           quinquefasciatus]
 gi|167872317|gb|EDS35700.1| cadherin EGF LAG seven-pass G-type receptor 1 [Culex
           quinquefasciatus]
          Length = 2812

 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 49/173 (28%), Positives = 86/173 (49%), Gaps = 18/173 (10%)

Query: 44  QFSKNEYSVSALENLPVN-YVLLTVTTNKPR--DLRVKYWLSNDYGERFSISRQ-GDISL 99
           +F +  Y  +  ENLP    VL  + T+K    + +++Y L  ++ +RF++ ++ G+I+ 
Sbjct: 146 EFERQSYQATVSENLPAGTKVLQPLATDKDSGPNAKIRYTLLGEHSDRFNVDQESGEITT 205

Query: 100 MQCLDYETEDSYRFTVYATDTLMT----TSATVNISVVNVNDWDPRFRYPQYELFLP-HI 154
              LD E    Y F++ A D+  T    T   + I+V +VND +P F  P + + +P  I
Sbjct: 206 AVLLDREDIPQYAFSLMAQDSSTTEPRATVVNLTIAVSDVNDNNPAFSSPNFHVNIPDRI 265

Query: 155 PLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDSGHISIVDLS 205
                  GS     +A D D+G   ++  S+ GP    F IN+  H  +++ S
Sbjct: 266 KRNQFVFGS-----KAIDLDEGLNSKILYSISGPDANKFHINE--HTGVIEAS 311



 Score = 55.1 bits (131), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 48/192 (25%), Positives = 84/192 (43%), Gaps = 21/192 (10%)

Query: 50  YSVSALENLPVNYVLLTVTTNKPR---DLRVKYWLSNDYGERFSI-SRQGDISLMQCLDY 105
           +SV+  EN  +   ++ +T++      +    Y  + + G +F I S  G++++   LD 
Sbjct: 572 FSVNVTENAEIGIFVIKITSSDSDIGINANATYIFTENIGNKFLIDSTTGNVTVAGHLDR 631

Query: 106 ETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVI 165
           E +D Y   V A D        + I++ + ND  P F +  Y    P +        + +
Sbjct: 632 EQQDEYILKVAAVDGAWRAETPLTITIQDQNDNAPEFEHSYYSFNFPEL----QKQVTFV 687

Query: 166 GKVEAADGDK---GDRVTLSLRGPYEKMFSINDSG---------HISIVDLSALNTSTIQ 213
           G+V A D DK      ++ SL+ P + MFSI+ +          H     + +   +   
Sbjct: 688 GQVIATDRDKHGPNSVISYSLQQPSD-MFSIDPATGEIFSKRTIHYKHTQMESSPENMFS 746

Query: 214 LVVVATDTGNPP 225
           L V+ATD G PP
Sbjct: 747 LTVLATDNGKPP 758



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 60/230 (26%), Positives = 101/230 (43%), Gaps = 18/230 (7%)

Query: 6    DFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVN---Y 62
            D +Q   L + A     + + ++A + V+    +     F++ EY     EN P N   Y
Sbjct: 951  DMIQTYQLNITAEDLGFKPKKSMAMITVTLTDINDNAPTFNQTEYDAFIPENSPPNTFVY 1010

Query: 63   VLLTVTTNKPRDLRVKYWLSNDYG-ERFSI-SRQGDISLMQCLDYETEDSYRFTVYAT-- 118
                   + P++  + Y +    G + FSI S  G I      DYE ++ Y   V A   
Sbjct: 1011 KAYAKDRDSPKNAIIHYSIIGGTGRDLFSIESTTGIIKSKATFDYEEQNKYTLDVVAMNP 1070

Query: 119  DTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTP-GSVIGKVEAADGDKGD 177
            D+ M     V + V  VN++ P+F  P +     H  +++    GS +G ++A D D G+
Sbjct: 1071 DSPMKNKTKVIVHVTGVNEFYPKFIQPVF-----HFDVSESAEVGSSVGSIQATDKDAGE 1125

Query: 178  --RVTLSLRGPY-EKMFSINDSGHISIV--DLSALNTSTIQLVVVATDTG 222
              +V   L G   +K FSI+    + +V  +L     S + L V+A + G
Sbjct: 1126 DGKVYYLLVGSSNDKGFSIHPESGVMVVSRNLDRETQSRVVLTVLAKNFG 1175



 Score = 48.1 bits (113), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 48/206 (23%), Positives = 88/206 (42%), Gaps = 22/206 (10%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTT----NKPRDLRVKYWLSNDYGERFSI-SRQGDISL 99
            F    Y V   EN P+   +LTV+     + P  +     L  +  + F++ S  G I++
Sbjct: 885  FQSPSYQVIVPENEPIGSTILTVSAPDNDDGPNGMVRYSILGGNERKEFAVDSVTGAITI 944

Query: 100  MQCLDYETEDSYRFTVYATDTLMT---TSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
            +Q LDY+   +Y+  + A D       + A + +++ ++ND  P F   +Y+ F+P    
Sbjct: 945  LQPLDYDMIQTYQLNITAEDLGFKPKKSMAMITVTLTDINDNAPTFNQTEYDAFIPE--- 1001

Query: 157  ADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSINDSGHI----SIVDLSALNT 209
             +  P + + K  A D D      +    + G    +FSI  +  I    +  D    N 
Sbjct: 1002 -NSPPNTFVYKAYAKDRDSPKNAIIHYSIIGGTGRDLFSIESTTGIIKSKATFDYEEQNK 1060

Query: 210  STIQLVVVATDTGNPPRQASVPAIMH 235
             T+ +V +  D+   P +     I+H
Sbjct: 1061 YTLDVVAMNPDS---PMKNKTKVIVH 1083



 Score = 39.3 bits (90), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 33/126 (26%), Positives = 63/126 (50%), Gaps = 6/126 (4%)

Query: 103 LDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPG 162
           LDYE+   Y   + A D+   +  +V   ++NV D +      + ++++  + + + +PG
Sbjct: 423 LDYESNQQYEVWIEAADSDRPSLRSVMQLIINVTDANDNAPVMEKQVYMAEV-MEEESPG 481

Query: 163 SVIGKVEAADGD--KGDRVTLSLRGPYEKMFSIN-DSGHI-SIVDLSALNTSTIQLVVVA 218
             + K++A D D  +  ++T SL+  ++  F IN D+G I +   L   +     L+V A
Sbjct: 482 LFVTKIQATDVDSEENGQITYSLKDDFDS-FEINSDTGEIYTTTRLDREDIPKYALIVEA 540

Query: 219 TDTGNP 224
            D G P
Sbjct: 541 VDQGVP 546


>gi|444723716|gb|ELW64355.1| Protocadherin Fat 2 [Tupaia chinensis]
          Length = 4521

 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/148 (29%), Positives = 72/148 (48%), Gaps = 12/148 (8%)

Query: 43   LQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGER---FSISRQ-GDIS 98
            L F +  YS + +E  PVN+++  ++      L   +W +   G++   F I +  G I 
Sbjct: 1526 LAFDETHYSFTVMETDPVNHMVGVISVEGRPGL---FWFNISGGDKDMDFDIEKTTGSIV 1582

Query: 99   LMQCLDYETEDSYRFTVYATDTLMTTSATVNISVV-NVNDWDPRFRYPQYELFLPHIPLA 157
            + + LD     SY  TV  TD   T +  V I ++ N+N   P+F   QYE+ +P     
Sbjct: 1583 IARPLDTRRRSSYNLTVEVTDGSHTIATQVYIFMIANINHHRPQFLEAQYEVRVPQ---- 1638

Query: 158  DLTPGSVIGKVEAADGDKGDRVTLSLRG 185
            D  PG  + +V+A D DKG  +  ++ G
Sbjct: 1639 DTLPGVELLQVQAMDQDKGKGLIYTIHG 1666



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 57/200 (28%), Positives = 88/200 (44%), Gaps = 24/200 (12%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTT------NKPRDLRVKYWLSNDYGERFSISRQGD- 96
            +F+  +Y  S +EN     ++ T+ T       + R +   Y    D   +F IS+ GD 
Sbjct: 3086 RFASEDYRGSVIENSEPGELVATLKTLDADISEQNRQVTC-YITEGDPLGQFGISQAGDE 3144

Query: 97   --ISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHI 154
              IS  + LD E    Y   + A+D     S TV I V+++ND  P+    +        
Sbjct: 3145 WRISSRKTLDREHIAKYLLRITASDGKFQASVTVEIFVLDINDNSPQCSQVR-------- 3196

Query: 155  PLADLTPGSVIGKVEAA--DGDKGDRVTLSLRGPYEKMFSIN-DSGHI-SIVDLSALNTS 210
               D++PG ++ KV A   D D   ++T SL GP    F ++  +G + ++  L      
Sbjct: 3197 --EDVSPGHLVLKVSATDLDTDTNAQITYSLHGPGVNEFKLHPHTGELTTLTALDRERKD 3254

Query: 211  TIQLVVVATDTGNPPRQASV 230
            T  LV  ATD G    QA V
Sbjct: 3255 TYSLVAKATDGGGRSCQADV 3274



 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 60/210 (28%), Positives = 102/210 (48%), Gaps = 17/210 (8%)

Query: 28   LATLIVSKAGTSLRELQFSKNEYSVSALENL-PVNYVLLTVTTNKPRDLRVKYWL--SND 84
            L T+ VS  G       F   E+SV   E+  P + VL   T  +P   +  Y +   N+
Sbjct: 3376 LGTVTVSVVGLEDYLPVFLNTEHSVQVPEDARPGSEVLHLATLTRPGAEKTSYRMVSGNE 3435

Query: 85   YGERFSI-SRQGDISLMQCLDYETEDSYRFTVYAT---DTLMTTSATVNISVVNVNDWDP 140
             G RF + +R G + + + LD+ET   Y  ++  +    + ++   T+ +++ +VN++ P
Sbjct: 3436 QG-RFRLDARTGILYVNRSLDFETSPKYFLSIECSRKGSSSLSDMTTIVVNITDVNEYRP 3494

Query: 141  RFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDK--GDRVTLSLRGPYE-KMFSIN-DS 196
            RF  PQ EL+   + L +   G +I  V A D D      +T SL G  +   F+++  +
Sbjct: 3495 RF--PQ-ELYDTRV-LENAIVGDIILTVSATDEDGPLNSAITYSLVGGNQLGHFTVHPKT 3550

Query: 197  GHISIVD-LSALNTSTIQLVVVATDTGNPP 225
            G + +   L    TS+  L + ATD+G PP
Sbjct: 3551 GELQVAKALDWEQTSSYSLRLRATDSGQPP 3580



 Score = 47.4 bits (111), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 39/155 (25%), Positives = 68/155 (43%), Gaps = 23/155 (14%)

Query: 11   ITLVVRAIQYDNQDRYALATLIVSKAGTSLREL---------------QFSKNEYSVSAL 55
            I  V R++ ++   +Y L+     K  +SL ++               +F +  Y    L
Sbjct: 3447 ILYVNRSLDFETSPKYFLSIECSRKGSSSLSDMTTIVVNITDVNEYRPRFPQELYDTRVL 3506

Query: 56   ENLPVNYVLLTVTT---NKPRDLRVKYWL--SNDYGERFSISRQGDISLMQCLDYETEDS 110
            EN  V  ++LTV+    + P +  + Y L   N  G      + G++ + + LD+E   S
Sbjct: 3507 ENAIVGDIILTVSATDEDGPLNSAITYSLVGGNQLGHFTVHPKTGELQVAKALDWEQTSS 3566

Query: 111  YRFTVYATDT---LMTTSATVNISVVNVNDWDPRF 142
            Y   + ATD+    +     + + VV+VND  PRF
Sbjct: 3567 YSLRLRATDSGQPPLHEDTNITVQVVDVNDNPPRF 3601



 Score = 45.4 bits (106), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 54/192 (28%), Positives = 85/192 (44%), Gaps = 15/192 (7%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGERFSIS--RQGDISLMQC 102
            F    Y V   EN+ +   +L      P  LR+ Y +  +       +  + G +++   
Sbjct: 2350 FQSPYYKVKVPENITLYTPILHTQARSPEGLRLIYNIVEEEPLMLFTTDFKTGVLTVTGP 2409

Query: 103  LDYETEDSYRFTVYATDTLMT--TSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLT 160
            LDYE++  + FTV ATDT +   + ATV + V ++ND  P F    Y   +    L   T
Sbjct: 2410 LDYESKTKHVFTVRATDTALGSFSEATVEVLVEDINDNPPTFSQLVYTTSVSE-GLPAQT 2468

Query: 161  PGSVIGKVEAADGDKGDRVTLSLR-----GPYEKMFSINDS-GHISIV-DLSALNTSTIQ 213
            P   + ++ A+D D G    +S +         K F IN S G +S V +L   +     
Sbjct: 2469 P---VIQLLASDQDSGKNRDVSYQIVEDGSNVSKFFQINGSTGEMSTVQELDYESQQHFH 2525

Query: 214  LVVVATDTGNPP 225
            + V A D G+PP
Sbjct: 2526 VKVRAMDRGDPP 2537



 Score = 44.7 bits (104), Expect = 0.074,   Method: Compositional matrix adjust.
 Identities = 56/190 (29%), Positives = 88/190 (46%), Gaps = 19/190 (10%)

Query: 51   SVSALENLPVNYVLLTVTTNKPRDL----RVKYWLSNDYGERFSIS-RQGDISLMQCLDY 105
            S+   E+LP   +L  +  + P DL     V+Y L ND    F +    G +SL + LD+
Sbjct: 1071 SLKVPEDLPPGTILTFLDASDP-DLGPAGEVRYVLLNDAHGTFRVDLMTGALSLERELDF 1129

Query: 106  ETEDSYRFTVYATDT----LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTP 161
            E +  Y  +++A+D        T   V + V++VN+       P +  F+    + + +P
Sbjct: 1130 EKQAGYNLSLWASDGGRPLARRTLCHVEVIVLDVNE---NLHPPHFASFVHQGQVQENSP 1186

Query: 162  -GSVIGKVEAADGDKG--DRVTLSLR-GPYEKMFSIN-DSGHI-SIVDLSALNTSTIQLV 215
             G+ +  V A D D G    +  SLR G     FSIN D+G I ++  L     S   L 
Sbjct: 1187 SGTQVMIVAARDDDSGLDGELQYSLRAGTSLAAFSINQDTGMIQTMAPLDREFASYYWLT 1246

Query: 216  VVATDTGNPP 225
            V+A D G+ P
Sbjct: 1247 VLAVDKGSVP 1256



 Score = 44.3 bits (103), Expect = 0.088,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 62/112 (55%), Gaps = 6/112 (5%)

Query: 122  MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG--DRV 179
            + +++ V + +++VND  P F +  + + LP   L+ ++PG V  ++ A+D D+G   ++
Sbjct: 1401 LKSTSRVVVRILDVNDNPPTFSHKLFNVRLPER-LSPMSPGPVY-RLVASDPDEGFNGKI 1458

Query: 180  TLSLRGPYEKMFSIND-SGHISIVDLSALNTSTIQLVVVATDTGNPPRQASV 230
            T S+    E+ FSI+  +G +S     A     I L + ATD G PP  ASV
Sbjct: 1459 TYSIEESDEEGFSIDPVTGMVSSSSTFAAGEYNI-LTIKATDNGQPPLSASV 1509



 Score = 43.5 bits (101), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 44/154 (28%), Positives = 71/154 (46%), Gaps = 15/154 (9%)

Query: 51   SVSALENLPVNYVLLTVTTNKPR---DLRVKYWLSNDYGER-FSISRQ-GDISLMQCLDY 105
            S+  LE +PVN  L  +    P    + ++ Y +++   E  F I  + G +++   LDY
Sbjct: 861  SIDVLERVPVNTPLARLAATDPDAGFNGKLVYVVADGNEEGCFDIELETGLLTVAAPLDY 920

Query: 106  ETEDSYRFTVYATDTLMTTSATVNISVVNVNDWD---PRFRYPQYELFLPHIPLADLTPG 162
            ET   Y   +   D      ++  +  VNV DW+   PRF    Y+L +      D   G
Sbjct: 921  ETTSFYVLNITVYDLGTPQKSSWKLLTVNVKDWNDNAPRFPPGGYQLTISE----DTEVG 976

Query: 163  SVIGKVEAADGDKGD--RVTLSLRGPYEKMFSIN 194
            + I +++  D D  D  RV  +L  P EK FS++
Sbjct: 977  TTIAELKTKDADSEDNGRVRYTLLSPTEK-FSLH 1009



 Score = 42.0 bits (97), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 39/133 (29%), Positives = 70/133 (52%), Gaps = 14/133 (10%)

Query: 95   GDISLMQCLDYETEDSYRFTVYATDT-----LMTTSATVNISVVNVNDWDPRFRYPQYEL 149
            G ++++  +DYE+  S++F+VY  D           A V I++ +VND  PRF    YE+
Sbjct: 1999 GTLTIVSEMDYESMPSFQFSVYVHDQGNAILFAPRPAQVIINIGDVNDSPPRFSDQIYEV 2058

Query: 150  FLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSIND-SGHISIVDLSAL 207
             +    +    PG  +  V+A+D D    VT S++ G  +   +I+  +G IS+++ + L
Sbjct: 2059 AV----MGPTHPGMELLVVQASDDDS--EVTYSIKTGNADDAVAIHPITGRISVLNPALL 2112

Query: 208  NTSTIQLVVVATD 220
              S  +L + A+D
Sbjct: 2113 GLSR-KLTIRASD 2124



 Score = 41.6 bits (96), Expect = 0.69,   Method: Compositional matrix adjust.
 Identities = 57/201 (28%), Positives = 88/201 (43%), Gaps = 24/201 (11%)

Query: 41   RELQFSKNEYSVSALENLPVN--YVLLTVTTNKPRDLRVKYWLSNDYGERFSISRQGDIS 98
            + LQF ++ Y  S  ENL      V+  V  N   D  + Y+L N   + F + +   + 
Sbjct: 2143 KSLQFHQDVYRASVEENLQDRKALVIFDVLGNHLNDT-LSYFLLNGT-DAFQMVKSAGVL 2200

Query: 99   LMQ--CLDYETEDSYRFTVYATDTLM---TTSATVNISVVNVNDWDPRFRY-PQYELFLP 152
              +    D E +D++   V   D         A V ISV +VND  P+F++ P Y +   
Sbjct: 2201 QTKGVAFDRERQDTHTVAVEVRDNRAPQRVAQAMVRISVKDVNDNPPKFKHLPYYTI--- 2257

Query: 153  HIPLADLT-PGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDS--GHISI---VDLSA 206
               + D T PG V+ +V A D D G    ++     + ++   D   G I++    D  A
Sbjct: 2258 ---IQDGTEPGDVLFQVSATDEDLGANGVITYAFAEDYIYFRIDPYLGDITLKKPFDYQA 2314

Query: 207  LNTSTIQLVVVATDTGNPPRQ 227
            LN    +L V+A D G P  Q
Sbjct: 2315 LN--KYRLKVIAQDGGTPSLQ 2333



 Score = 40.8 bits (94), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 36/132 (27%), Positives = 59/132 (44%), Gaps = 1/132 (0%)

Query: 12   TLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNK 71
            TL V+A    +  R+ LAT+I+    +      FSK EY V   E++PV   +L V+   
Sbjct: 1806 TLTVKAEDQGSPKRHDLATVIIHVYPSDSSAPIFSKAEYFVEIPESIPVGSPILLVSATS 1865

Query: 72   PRDLRVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDTLMT-TSATVNI 130
              ++  +    N  G     S  G IS  + LD+E   SY+  +  ++         V +
Sbjct: 1866 SSEVTYELREGNKDGVFSMNSYSGLISTQKNLDHEKISSYQLKIRGSNMAGAFADVMVLV 1925

Query: 131  SVVNVNDWDPRF 142
             +++ ND  P F
Sbjct: 1926 YIIDENDNAPTF 1937



 Score = 40.4 bits (93), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 64/239 (26%), Positives = 98/239 (41%), Gaps = 43/239 (17%)

Query: 89   FSISRQ-GDISLMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRY 144
            FSI++  G I  M  LD E    Y  TV A D     +++   V I V++VND  PR   
Sbjct: 1220 FSINQDTGMIQTMAPLDREFASYYWLTVLAVDKGSVPLSSVTEVYIEVMDVNDNPPRMSR 1279

Query: 145  PQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSGHISIVDL 204
            P   +F P I L D   G+ + ++EA D D      L+       + S N  G  +I   
Sbjct: 1280 P---VFYPSI-LEDAPSGTSVLQLEAWDPDSISEGKLTF-----NITSGNHMGFFAIHPF 1330

Query: 205  SALNTSTIQL-------VVVATDTGNPPRQASVPAIMHFPEAIVQQASSKLNSGTSSTVL 257
            + L ++  QL        ++    G+      +  I   PE  +  A + L +   S  L
Sbjct: 1331 TGLLSTAQQLDREKKDEHILEVSNGH----KLITGIQKPPEGGIYGAKAGLGATGKSLAL 1386

Query: 258  IILGVVLIVLG-------FVIILLILYIHKNKHTKNNGPPGSSHSKNDSFLSNVILPEK 309
             ++ V +   G         +++ IL +       N+ PP  SH      L NV LPE+
Sbjct: 1387 WLMKVTVQDNGEPSLKSTSRVVVRILDV-------NDNPPTFSHK-----LFNVRLPER 1433


>gi|341901157|gb|EGT57092.1| CBN-CDH-12 protein [Caenorhabditis brenneri]
          Length = 2789

 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 60/216 (27%), Positives = 99/216 (45%), Gaps = 14/216 (6%)

Query: 13   LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVT-TNK 71
            +VVRA+       Y+   + ++   T+   L+F +  Y+    E+L     + T++ T  
Sbjct: 1292 VVVRAVNMQANKFYSDVGVAITPVSTTNPTLRFQQPTYNFEVYESLAEGEAIGTISVTGA 1351

Query: 72   PRDLRVKYWLSNDYGERFSISRQGDISLMQCLDYET-EDSY--RFTVYATDTLMTTSATV 128
            P +   K+ +S D      I + G + L + +D E  EDS    FTV AT    T  + V
Sbjct: 1352 PSN--CKFSISPD-DSFLGIHQNGTLFLARSVDAEELEDSLVQEFTVTATAGSETARSRV 1408

Query: 129  NISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR---G 185
             +++ +VN++ P F     E+    I   D TPG+ IG+V A D D  ++  L  R   G
Sbjct: 1409 QVAIRDVNEFQPEFDEDDVEM---SIERTDATPGTKIGRVMAHDKDVSEKNKLIYRIVGG 1465

Query: 186  PYEKMFSINDSGHISIVDLS-ALNTSTIQLVVVATD 220
               K+  I + G I + D     +T    L++ A D
Sbjct: 1466 SGRKLVFIQEDGTIIVGDEKIPSDTEEFDLIIEAVD 1501



 Score = 48.1 bits (113), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 46/147 (31%), Positives = 73/147 (49%), Gaps = 12/147 (8%)

Query: 89   FSISRQ-GDISLMQCLDYETEDSYRFTVYA--TDTLMTTSATVNISVVNVNDWDPRFRYP 145
            F I +Q G++S  + LD E +  YRF V A  T T+ +TS  + + VV+VND  P F   
Sbjct: 870  FEIHQQSGEVSTSRPLDTEQKKFYRFQVRACLTQTICSTSDVI-VEVVDVNDNAPVFMNR 928

Query: 146  QYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSIN-DSGHISIVD 203
            + E  +     +D+ PG+ I K+ A D D G+   L+      +  FSI+  +G ++   
Sbjct: 929  KLEATVE----SDVPPGTKIVKLLAKDADSGNNSMLTFALDSNQDTFSIDPTTGQLTTA- 983

Query: 204  LSALNTSTIQLVVVATDTGNPPRQASV 230
              +L      ++V  +D G P R  S 
Sbjct: 984  -QSLTHPLYNILVTVSDNGVPRRSDSA 1009



 Score = 47.0 bits (110), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 47/191 (24%), Positives = 87/191 (45%), Gaps = 20/191 (10%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGE-RFSISRQGDISLMQC 102
            QF+K+EYS +   ++PV + ++T+         +++ L  D  + +F I  +G +S    
Sbjct: 1626 QFTKDEYSGTIPVDIPVGFPIVTIEAVDMDHDSIEFSLQGDPCDNQFQIDNKGKVSYKVA 1685

Query: 103  LDYETEDSYRFTVYATDTLMTTSATVNISVV--------NVNDWDPRFRYPQYELFLPHI 154
             +  T+ +    V A+D   +T  T+ ++V            +  P F  P+Y LF    
Sbjct: 1686 KEQRTDGNVVCVVVASDGEHSTDTTLRLTVQPGATITQPPTPNHAPTFSAPEY-LFTVSQ 1744

Query: 155  PLADLTPGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSINDSGHISIVDLSALNTSTIQ 213
               +L      G+V+A+D D  D +  S+    Y  +F ++ +G I++     +      
Sbjct: 1745 NATEL------GEVQASDPD-NDPIDYSIEPTEYRNLFHVDSNGRITV--QGGVEQPRYS 1795

Query: 214  LVVVATDTGNP 224
             +VVA D GNP
Sbjct: 1796 FLVVAEDRGNP 1806


>gi|301627834|ref|XP_002943073.1| PREDICTED: retrotransposable element Tf2 155 kDa protein type 1-like
            [Xenopus (Silurana) tropicalis]
          Length = 1474

 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 53/186 (28%), Positives = 93/186 (50%), Gaps = 10/186 (5%)

Query: 45   FSKNEYSVSALENLPVNY-VLLTVTTNKPRDLRVKYWLS-NDYGERFSISRQ-GDISLMQ 101
            FS+  YS    EN+ V Y V   V T    +  + Y ++  D    F+I R  G I    
Sbjct: 1083 FSQGSYSFVMFENVAVGYNVGTVVATTIDLNTNITYLVTTGDQKGVFTIDRSTGLIMTAS 1142

Query: 102  CLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTP 161
             +D E +D Y+  V A+   +T  A VNI+V ++ND  P F      + +    + +   
Sbjct: 1143 VVDREEQDFYQLKVVASGGAVTGEAIVNITVKDLNDNSPHFVNAVENVNV----VENWKT 1198

Query: 162  GSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIND-SGHISIVDLSALNTSTIQLVVVA 218
            G +I + +A D D+G   RV+ SL+   + +F +++ +G +S+     ++T + Q+ ++A
Sbjct: 1199 GHIIFQAKAVDPDEGVNGRVSYSLKQNPQSLFYVDEVTGAVSLTGPLDVDTGSYQVEIIA 1258

Query: 219  TDTGNP 224
            +D G P
Sbjct: 1259 SDMGVP 1264



 Score = 48.5 bits (114), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 43/139 (30%), Positives = 66/139 (47%), Gaps = 11/139 (7%)

Query: 45   FSKNEYSVSALENLPVNYVLLTV-TTNKPRDL--RVKY-WLSNDYGERFSISRQGDISLM 100
            F +  Y V+ LE+ PVN     V  T+K   L   + Y  +  + GE F I   G + + 
Sbjct: 1286 FDQLSYEVTLLESEPVNSRFFKVYATDKDSGLNGEITYSIIHGNVGEAFGIFPDGQLYVK 1345

Query: 101  QCLDYETEDSYRFTVYATD-TLMTTSATVNISVV--NVNDWDPRFRYPQYELFLPHIPLA 157
              LD E +D Y   V A+D  +   S TVN++++  +VND  P F    Y  +       
Sbjct: 1346 SELDREVKDLYILQVSASDRAVEPLSTTVNVTIILEDVNDNRPLFNSTNYVFYFEE---- 1401

Query: 158  DLTPGSVIGKVEAADGDKG 176
            + + GS +G++ A D D G
Sbjct: 1402 ENSGGSFVGRIYAVDKDSG 1420


>gi|395542254|ref|XP_003773048.1| PREDICTED: protocadherin Fat 1 [Sarcophilus harrisii]
          Length = 4589

 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/201 (23%), Positives = 90/201 (44%), Gaps = 30/201 (14%)

Query: 7    FLQPITLVVRAIQYDNQDRYALATL-------------------IVSKAGTSLRELQFSK 47
            F++P T VV + ++     Y + ++                    +SK   S   + F +
Sbjct: 1302 FIEPKTGVVSSKKFSGAREYDILSIKAVDNGRPQKSSTARLHIEWISKPKPSPEPISFEE 1361

Query: 48   NEYSVSALENLPVNYVLLTVTTNKPRDLRVKYW---LSNDYGERFSISR-QGDISLMQCL 103
              +S + +E+ PV +++  ++      L    W   +  +Y  RF + +  G I + + L
Sbjct: 1362 PYFSFTVMESDPVAHMIGVISVEP---LGTSLWFDIIGGNYDSRFDVDKGTGTIIVARPL 1418

Query: 104  DYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGS 163
            D E + +Y  TV ATD        V I V++ ND  P+F   +YE+ +P     D  P +
Sbjct: 1419 DAEQKSNYNLTVEATDGTTAIITQVLIKVIDTNDHRPQFSKSKYEVLIPE----DTVPDT 1474

Query: 164  VIGKVEAADGDKGDRVTLSLR 184
             I ++ A D D+ +++  +L+
Sbjct: 1475 EILQISATDKDEKNKLIYTLQ 1495



 Score = 58.5 bits (140), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 44/145 (30%), Positives = 69/145 (47%), Gaps = 8/145 (5%)

Query: 90   SISRQGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYEL 149
            +I  +  + + + LD E +D+Y  T+ ATD   ++ A V + V++ ND  P      Y  
Sbjct: 2972 NIQNEWKVYVKKPLDREKKDNYLLTITATDGTFSSKAIVEVKVLDANDNSPICEKSAYSD 3031

Query: 150  FLPHIPLADLTPGSVIGKVEAADGD--KGDRVTLSLRGPYEKMFSIN-DSGHI-SIVDLS 205
             +P     D  PG +I +V A D D      +T +L GP  + F +N D+G + +   L 
Sbjct: 3032 TIPE----DTVPGKLIMQVSATDADIRSNAEITYTLSGPGAEKFKLNADTGELKTFAPLD 3087

Query: 206  ALNTSTIQLVVVATDTGNPPRQASV 230
                +   L+V ATD G    Q SV
Sbjct: 3088 REQQAVYNLLVKATDGGGRFCQMSV 3112



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 56/205 (27%), Positives = 95/205 (46%), Gaps = 26/205 (12%)

Query: 45   FSKNEYSVSALENLPVNYVLLTV-TTNKPRDL--RVKYWLSNDYG-ERFSISRQGDISLM 100
            F +NEY V   EN P+  ++  V  T++   +  ++ Y + ND+  +RF I+ +G I   
Sbjct: 2493 FMQNEYEVELAENAPLQTLVFEVKATDEDSGIYGQITYHIVNDFAKDRFYINERGQIFTS 2552

Query: 101  QCLDYET--EDSYRFTVYATDTLMTTS-ATVNISVVNVNDWDPRFRYPQYELFLPHIPLA 157
            + LD ET  E      + A DT    +  T+N+ + + ND  P+FR  +Y++ +     +
Sbjct: 2553 EKLDRETAGEKVIAIRLMAKDTGGKVAFCTINVILTDDNDNAPQFRATKYKVTIG----S 2608

Query: 158  DLTPGSVIGKVEAADGDKGDR--VTLSLRGPYE---------KMFSINDSGHISIVDLSA 206
            D   G+ + KV A+D D+G    +  S+    E         K+F I  +       L  
Sbjct: 2609 DAPKGTSVIKVLASDADEGSNADIMYSIEADSESVQENLEINKLFGIITTKE----SLVG 2664

Query: 207  LNTSTIQLVVVATDTGNPPRQASVP 231
            L        V A D G+P +++ VP
Sbjct: 2665 LENEIFTFFVRAVDGGSPSKESVVP 2689



 Score = 54.3 bits (129), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 62/226 (27%), Positives = 104/226 (46%), Gaps = 21/226 (9%)

Query: 13   LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENL----PVNYVLLTVT 68
            L+V+A   D   R+   +++ +    +    +FS + Y+++  EN     P+  V  T  
Sbjct: 3096 LLVKAT--DGGGRFCQMSVVFTLEDVNDNAPEFSADPYAITVFENTEPKTPLTRVQAT-D 3152

Query: 69   TNKPRDLRVKYWLSNDYGERFSISRQ-GDISLMQCLDYETEDSYRFTVYATD----TLMT 123
             +   + ++ Y L N    +FSI    G I L + LD E +  Y   + A D      +T
Sbjct: 3153 ADAGLNHKIAYSLVNSADGQFSIDESSGIIRLEKPLDRELQAVYNLILKAVDHGVPRRLT 3212

Query: 124  TSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS- 182
             + TV +SV+++ND  P F Y +Y   +P     D+  G+ + +V AA  D      ++ 
Sbjct: 3213 ATGTVIVSVLDINDNPPVFEYREYGATVPE----DILVGTEVLQVYAASRDIEVNAEITY 3268

Query: 183  --LRGPYEKMFSIND-SGHISIVD-LSALNTSTIQLVVVATDTGNP 224
              + G     FSI+  +G I I+D L   ++    L V ATD G P
Sbjct: 3269 AIISGNEHGKFSIDSTTGAIFIIDNLDYESSHEYYLTVEATDGGTP 3314



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 60/200 (30%), Positives = 96/200 (48%), Gaps = 31/200 (15%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLS-NDYGERFSIS-RQGDISLMQC 102
            F K  YS    EN+ ++  ++ V  N P  L+V Y ++  D   +F+I+   G I+++  
Sbjct: 2183 FEKAFYSAEIPENIQLHSPVVHVQANSPEGLKVFYSITEGDPFSQFTINFNTGVINVIAP 2242

Query: 103  LDYETEDSYRFTVYATDTLMTTSATVNISVV--NVNDWDPRFRYPQYELFLPHIPLADLT 160
            LD+E+  +Y+ ++ ATD+L    A V + ++  +VND  P F    Y           L+
Sbjct: 2243 LDFESHPAYKLSIRATDSLTGVHAEVFVDIIVEDVNDNPPVFAQQSY--------TTTLS 2294

Query: 161  PGSVIG----KVEAADGDKGDRVTLSL-------RGPYEKMFSIN-DSGHISIVDLSALN 208
              +VIG    +V A D D      +S        + P    F I+  SG IS+V   +L+
Sbjct: 2295 EATVIGMSVVQVHATDSDSVPNRGISYHLFENQTKSP--DHFHIDGSSGLISLV--RSLD 2350

Query: 209  TSTIQ---LVVVATDTGNPP 225
               IQ   L+V A D+G PP
Sbjct: 2351 YEEIQEHKLLVRAVDSGMPP 2370



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 70/239 (29%), Positives = 110/239 (46%), Gaps = 23/239 (9%)

Query: 5    DDFLQPI-TLVVRAIQYDNQDRY-ALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNY 62
            D  LQ +  L+++A+ +    R  A  T+IVS    +     F   EY  +  E++ V  
Sbjct: 3189 DRELQAVYNLILKAVDHGVPRRLTATGTVIVSVLDINDNPPVFEYREYGATVPEDILVGT 3248

Query: 63   VLLTVTTNKPRDLRVKYWLS------NDYGERFSI-SRQGDISLMQCLDYETEDSYRFTV 115
             +L V     RD+ V   ++      N++G +FSI S  G I ++  LDYE+   Y  TV
Sbjct: 3249 EVLQVYA-ASRDIEVNAEITYAIISGNEHG-KFSIDSTTGAIFIIDNLDYESSHEYYLTV 3306

Query: 116  YATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAAD 172
             ATD     +   A VNI+V ++ND  P F    Y   +    + + +  +V+   + AD
Sbjct: 3307 EATDGGTPSLNDVAAVNINVTDINDNTPVFSQDTYTAVISEDAVLEQSVVTVMA--DDAD 3364

Query: 173  GDKGDRVTLS-LRGPYEKMFSIND-SGHISIVDLSALNTSTIQ---LVVVATDTGNPPR 226
            G   + +  S + G     F+I+   G I +  L  L+   I    L V A D G+PPR
Sbjct: 3365 GPSNNYIHYSIIDGNQGNPFTIDPVKGEIKVTQL--LDREMISGYTLTVQAADNGSPPR 3421



 Score = 48.1 bits (113), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 47/142 (33%), Positives = 67/142 (47%), Gaps = 22/142 (15%)

Query: 48   NEYSVSALENLPVNYVLLTVTTNKPRDL------RVKYWL----SNDYGERFSISRQ-GD 96
            N Y    +ENLP    ++ V   K  DL      ++ Y L    S D  E F+I  + G 
Sbjct: 2813 NPYEAFIVENLPGGSKVIQV---KATDLDSGTNGQILYSLDQSQSLDVIESFAIDMETGW 2869

Query: 97   ISLMQCLDYETEDSYRFTVYATD----TLMTTSATVNISVVNVNDWDPRFRYPQYELFLP 152
            I+ ++ LD+E  D Y  TV A+D      ++++A V ISV +VND  PRF    Y+  + 
Sbjct: 2870 ITTLKELDHEKRDKYHITVIASDYGEKVQLSSTAVVEISVTDVNDNPPRFTAEIYKGTVS 2929

Query: 153  HIPLADLTPGSVIGKVEAADGD 174
                 D  PG VI  +   D D
Sbjct: 2930 E----DDPPGGVIAILSTTDAD 2947



 Score = 45.4 bits (106), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 47/181 (25%), Positives = 89/181 (49%), Gaps = 29/181 (16%)

Query: 44   QFSKNEYSVSALENLPVNYVL--LTVTTNKPRDLRVKYWLS------NDYGERFSISRQ- 94
            +FS+  Y+ +  E+LP+   +  + V  ++P    V Y L+      ++ GE F I +  
Sbjct: 2703 KFSEPFYTYTVSEDLPIGTEIDVIRVDYSEP----VLYSLTKGNTPESNGGEVFVIDKHS 2758

Query: 95   GDISLMQCLDYETEDSYRFTVYA----TDTLMTTSATVNISVVNVNDWDPRFRYPQYELF 150
            G + L + LD+ET   Y+F+V A     D+ + +S  ++I V + ND  P      YE F
Sbjct: 2759 GKLKLEKNLDHETMKWYQFSVVAQSTHEDSEVVSSVDISIQVKDANDNSPILESNPYEAF 2818

Query: 151  LPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSGHISIVDLSALNTS 210
            +    + +L  GS + +V+A D D G    +        ++S++ S  + +++  A++  
Sbjct: 2819 I----VENLPGGSKVIQVKATDLDSGTNGQI--------LYSLDQSQSLDVIESFAIDME 2866

Query: 211  T 211
            T
Sbjct: 2867 T 2867



 Score = 45.1 bits (105), Expect = 0.057,   Method: Compositional matrix adjust.
 Identities = 56/205 (27%), Positives = 90/205 (43%), Gaps = 36/205 (17%)

Query: 44   QFSKNEYSVSALEN-LPVNYVLLTVTTNKPRDLRVKYWLSNDYG----ERFSIS-RQGDI 97
            QFSK++Y V   E+ +P   +L    T+K    ++ Y L +       ++F +    G +
Sbjct: 1456 QFSKSKYEVLIPEDTVPDTEILQISATDKDEKNKLIYTLQSSTDPLSLKKFRLDPATGSL 1515

Query: 98   SLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHI 154
               + LD+ET   +  TV   D    +  + A V ++V ++ND  P F    Y+  +   
Sbjct: 1516 YTTEKLDHETAHQHILTVMVRDQDVPVKRSFARVIVNVSDMNDHAPWFTSSSYQGRV--- 1572

Query: 155  PLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSGHI--------------S 200
                   GSV+ +V A D DKG+          E ++SI +SG+I              +
Sbjct: 1573 -YESAAVGSVVLQVTALDKDKGENA--------EVLYSI-ESGNIGNSFTIDPILGSIKT 1622

Query: 201  IVDLSALNTSTIQLVVVATDTGNPP 225
              +L   N     L+V ATD GNPP
Sbjct: 1623 AKELDHSNQEEYDLMVKATDRGNPP 1647



 Score = 42.0 bits (97), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 41/161 (25%), Positives = 75/161 (46%), Gaps = 12/161 (7%)

Query: 45   FSKNEYSVSALENLPVNY-VLLTVTTNKPRDLRVKYW----LSNDYGERFSISRQGDISL 99
            FSK  YS+   EN PV   VL  V T+K        +    +S +  + F ++++G +  
Sbjct: 3441 FSKGNYSIIIQENKPVGVSVLQLVVTDKDSSHNGPPFFFSIMSGNEEKAFEVNQEGVLIT 3500

Query: 100  MQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
               +  + +D Y   V   D+    +++ A ++I V+  + + P       E+F+     
Sbjct: 3501 SMAIKRKVKDHYFLHVKVADSGKPQLSSLAYIDIRVIEESIYPPAIL--PLEIFI--TTF 3556

Query: 157  ADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSG 197
             +   G VIGK+ A D D  D +T +L      +FS++++G
Sbjct: 3557 GEEYSGGVIGKIHATDQDVYDTLTYNLDPKMNNLFSVSNTG 3597



 Score = 41.2 bits (95), Expect = 0.92,   Method: Compositional matrix adjust.
 Identities = 52/189 (27%), Positives = 86/189 (45%), Gaps = 15/189 (7%)

Query: 24  DRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVT---TNKPRDLRVKYW 80
           D  A   ++V    T+    +F++  Y  S  EN+PV   +++V+   +++  +  V Y 
Sbjct: 443 DSKAYTKVLVKVMSTNSNPPEFTQTSYKTSFDENIPVGTSVMSVSAIDSDEGENGYVTYS 502

Query: 81  LSNDYGERFSISR-QGDISLMQCLDYE-TEDSYRFTVYATDTLM----TTSATVNISVVN 134
           ++N     F I+   G +S  + LDYE     Y   V A+D  +       A V +++ N
Sbjct: 503 IANLNQVPFVINHFTGAVSTSEELDYELMPRVYTLRVRASDWGLPYRREVEALVTLTLNN 562

Query: 135 VNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYE-KMFSI 193
           +ND  P F     E  +P     DL  G  I  V A D D+   V   +    E  +FS+
Sbjct: 563 LNDNTPLFEKINCEGTIPR----DLGVGEQITTVSAIDADELQLVRYQIEAGNEFDLFSL 618

Query: 194 N-DSGHISI 201
           N +SG +S+
Sbjct: 619 NPNSGVLSL 627



 Score = 39.3 bits (90), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 52/191 (27%), Positives = 85/191 (44%), Gaps = 30/191 (15%)

Query: 56   ENLPVNYVLLTVTTNKP---RDLRVKYWLSNDYG-ERFSISRQ-GDISLMQCLDYETEDS 110
            E++P+   ++TV+ +     RD  + + +    G   F I  + G I   + LD ET   
Sbjct: 1046 EDVPIGTSVMTVSAHDEDTGRDGEIHFSIRGGSGIGIFKIDEEKGVIETAEKLDRETVSH 1105

Query: 111  YRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSV-IG 166
            Y  TV+ATD     +++   + I V +VND  P+   P   ++ P +   + +P  V + 
Sbjct: 1106 YWLTVFATDQGVVPLSSFTEIYIEVEDVNDNAPQTSEP---VYYPEV--MENSPKDVSVV 1160

Query: 167  KVEAADGDKGDRVTLSLRGPYEKMFSINDSGHISIVDLSALNTSTIQ-----------LV 215
            ++EA D D      L+      K+ S N  G  SI   + L T+T +           L 
Sbjct: 1161 QIEAFDPDSSSNDKLTY-----KITSGNPQGFFSIHPKTGLITTTSRKLDREQQNEHILE 1215

Query: 216  VVATDTGNPPR 226
            V  TD G PP+
Sbjct: 1216 VTVTDDGIPPK 1226



 Score = 38.5 bits (88), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 39/129 (30%), Positives = 57/129 (44%), Gaps = 20/129 (15%)

Query: 95   GDISLMQCLDYETEDSYRFTVYATDTLM---TTSATVNISVVNVNDWDPRFRYPQYELFL 151
            G ISL++ LDYE    ++  V A D+ M   ++   V + V ++ND  P F    YE  +
Sbjct: 2341 GLISLVRSLDYEEIQEHKLLVRAVDSGMPPLSSDMIVTVDVTDLNDNPPLFDQLLYEAKI 2400

Query: 152  ----PHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSINDSGHISIVDL 204
                PH        G  +  V+A D D  D   L    L G   K F+I+      I+ L
Sbjct: 2401 SEQAPH--------GHFVTCVKAYDADSSDIDKLEYSILSGNEHKNFAID--SKTGIITL 2450

Query: 205  SALNTSTIQ 213
            S L   T++
Sbjct: 2451 SNLRRQTLK 2459


>gi|170031843|ref|XP_001843793.1| cadherin [Culex quinquefasciatus]
 gi|167871192|gb|EDS34575.1| cadherin [Culex quinquefasciatus]
          Length = 2888

 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 64/211 (30%), Positives = 92/211 (43%), Gaps = 29/211 (13%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYW-LSNDYGERFSISRQGD---- 96
           F K EYS+  +E+ P N  ++ VT    +   + R+ Y  L +D  +R   S   D    
Sbjct: 447 FEKTEYSIKVIESTPSNSQIVQVTAVDADTGNNARLTYRILGDDQRQRSGKSTSSDEHVP 506

Query: 97  -----------ISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRF 142
                      I L   LD E ++ Y  TV  +D     +T +  V ++V++ ND  P F
Sbjct: 507 DIFGIFPNSGWIYLRTKLDRELQERYNITVIVSDNGVPTLTATTHVIVTVLDANDNSPIF 566

Query: 143 RYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG-DRVTLSLRGPYEKMFSIND-SGHIS 200
               YE  +      ++  GSVIG+V A+D D G + V      P    F IN  SG I+
Sbjct: 567 PKQLYEFEIEE----NMRRGSVIGQVTASDADTGINAVVRYSLIPSNSSFQINPVSGEIT 622

Query: 201 IVD-LSALNTSTIQLVVVATDTGNPPRQASV 230
             D L     S   LVV A D G P R + +
Sbjct: 623 TRDSLDRETKSDYDLVVEARDQGTPYRSSRI 653



 Score = 54.7 bits (130), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 58/187 (31%), Positives = 85/187 (45%), Gaps = 20/187 (10%)

Query: 51   SVSALENLPVNYVLLTVT-----TNKPRDLRVKYWLSNDYGERFSISR-QGDISLMQCLD 104
            SVS   NL    VL T+T     TN P        L +D    F+I R  G + L++ LD
Sbjct: 1780 SVSEATNLGT--VLTTITANDVDTNPPLTYSFGDSLDDDAAAYFAIDRYSGKVILIKPLD 1837

Query: 105  YETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGS- 163
            YE    Y+  + A+D+      T+ + V +VND  P F+   Y     H  L D +  + 
Sbjct: 1838 YEERHEYQLRILASDSAHVARTTLTVRVTDVNDNPPVFQQITY-----HAMLNDDSESNT 1892

Query: 164  --VIGKVEAADGD-KGDRVTLSLRGPYEKMFSINDSGHISIVDLSALN---TSTIQLVVV 217
               I  V A D D +G+        P    F+I++      V++S +N   + T+ L VV
Sbjct: 1893 NIAIIAVNATDVDSEGNAAIRYAISPPSPGFAIDELTGQLFVNMSQVNRARSGTLYLTVV 1952

Query: 218  ATDTGNP 224
            ATD+G P
Sbjct: 1953 ATDSGRP 1959



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 60/200 (30%), Positives = 89/200 (44%), Gaps = 19/200 (9%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTTNKPR---DLRVKYWLSNDYGERFSI-SRQGDISL 99
            +F   +Y  +  E+  +   +LTV         + R+ Y L+N     F I S+ G I+ 
Sbjct: 1343 KFELQKYIATVDEDAQLGTTVLTVKAVDADIGINARIVYSLANVTEWLFDIDSKSGVITT 1402

Query: 100  MQCLDYETEDSYRFTVYATD----TLMTTSATVNISVVNVNDWDPRF-RYPQYELFLPHI 154
                D E +  Y F V ATD       + S  V + + +VND  P F +YP    F   I
Sbjct: 1403 AGNFDRERQSIYHFMVVATDGGRYNARSQSVAVQVIIADVNDNKPVFDKYP----FKEQI 1458

Query: 155  PLADLTPGSVIGKVEAADGDKGD--RVTLSLR-GPYEKMFSINDS-GHISIVD-LSALNT 209
              A + PG  +  + A D D+G    +  SL   P    F IN S G +S    L++ N 
Sbjct: 1459 G-ALVQPGQTLLHISATDADQGSNGEIVYSLNDNPNNSKFRINPSTGALSATQSLASENG 1517

Query: 210  STIQLVVVATDTGNPPRQAS 229
              + + V A D GNPP+ A+
Sbjct: 1518 RLLHIEVTARDKGNPPQVAT 1537



 Score = 51.2 bits (121), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 87/330 (26%), Positives = 137/330 (41%), Gaps = 51/330 (15%)

Query: 13   LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTV-TTNK 71
            LV+RA       + ++   I++    +  E QF   EY     EN PV   + T   T+ 
Sbjct: 2170 LVIRACDSYVVPKCSIHPFIINLTDENDNEPQFPVPEYLEFVGENEPVGISIFTARATDM 2229

Query: 72   PRDL--RVKYWLSNDYGERFSI-----------SRQGDISLMQCLDYETEDSYRFTVYAT 118
             R +   V Y + N     +S            S  G I+     DYE ++ Y FT+ AT
Sbjct: 2230 DRGMYGNVNYSIENALASGYSAIDDGWKLFKVDSISGVINSNAVFDYEEKNRYSFTLKAT 2289

Query: 119  DTL-MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG- 176
            D+   + +  V I + + +++ P+F    Y   L       L  G V+G V A D D+G 
Sbjct: 2290 DSGGKSKTVKVKILIESRDEFSPQFTERTYRFVLKTPDTGHLPVGYVVGHVTATDRDRGP 2349

Query: 177  -DRVT--LSLRGPYEKMFSINDSGHISIV----DLSALNTS--TIQLVVVATDTGNPPRQ 227
              R+   L+ + PY KM     +G I I     +L+A   S   I LVV A+      RQ
Sbjct: 2350 DGRIVYQLTTQHPYFKMNRT--TGAILIKKKLDNLAATLESGRDISLVVTASSG----RQ 2403

Query: 228  ASVPAIMHFPEAIVQQASSKLNS-----GTSSTVLIILGVVLIVLGFVIILLI------- 275
             S+  +     +I     +K++      G+S +V    G+    LG +I +L+       
Sbjct: 2404 GSLTNMTVVEISIDALGHNKIDGAGGDYGSSESVSASNGLANWALGLLISILLVVITAAS 2463

Query: 276  --LYIH----KNKHTKNNGPPGSS--HSKN 297
              L++H    + KH   +G    S  HS N
Sbjct: 2464 IFLFLHMRNRQQKHVNKSGLSSESVGHSNN 2493



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 59/196 (30%), Positives = 88/196 (44%), Gaps = 28/196 (14%)

Query: 56   ENLPVNYVLLTVT---TNKPRDLRVKYWLSND---YGERFSI-SRQGDISLMQCLDYETE 108
            E+ PV  ++   T   ++   +  +KY LS       E FSI S  G ++L+  LDYE  
Sbjct: 906  EDSPVGAIVFNFTATDSDSGTNAELKYNLSKPATPQKEYFSIDSLTGSLTLLAPLDYEET 965

Query: 109  DSYRFTVYATDT------LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPG 162
              +   V ATD        MTTSAT  I V +VND  P F  PQ +  + +I  + L   
Sbjct: 966  KEFLLIVQATDQSSNATERMTTSATARIMVTDVNDNSPSFVVPQAQDTVVYISDS-LEVN 1024

Query: 163  SVIGKVEAADGDKGD--RVTLSL-RGPYEKMFSIN-DSGHISIVDLSALN---------- 208
             ++    A D D G+  R+   +  G  ++ F I+ DSG + +    + N          
Sbjct: 1025 QIVAHTVAIDRDSGENGRIVYKIVSGNDDERFVIDPDSGFVKLAKPFSSNFIADSTKNSV 1084

Query: 209  TSTIQLVVVATDTGNP 224
            T    LV+ A+D G P
Sbjct: 1085 TGRYNLVISASDQGVP 1100



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 40/113 (35%), Positives = 58/113 (51%), Gaps = 6/113 (5%)

Query: 77  VKYWLSNDYGE--RFSI-SRQGDISLMQCLDYETEDSYRFTVYATDT-LMTTSATVNISV 132
           V Y L   Y +   F + S  G++ +   LDYET +SY F + ATD   ++T+A V I +
Sbjct: 56  VNYTLGEGYKKITEFEVRSSTGEVCIAAELDYETRNSYEFPIIATDRGGLSTTAMVKIQL 115

Query: 133 VNVNDWDPRFRYPQYELFLPH-IPLADLTPGSVIGKVEAADGDKGDRVTLSLR 184
            +VND  P F   +Y + L   +P   L    V+  V A D D G+  T+S R
Sbjct: 116 TDVNDNRPTFYPREYNVSLRESMPTNSLLSTPVV-VVVATDSDSGNFGTISYR 167



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 40/116 (34%), Positives = 60/116 (51%), Gaps = 13/116 (11%)

Query: 77  VKYWLSNDYGERFSI----SRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVN 129
           + Y LSN+     S+    SR G +SL + LDYET   +   V A+D+   L++T+ T+ 
Sbjct: 375 ITYRLSNNGPSTSSLFAVDSRSGHLSLARPLDYETTQRHMLIVTASDSGIPLLSTNLTIM 434

Query: 130 ISVVNVNDWDPRFRYPQYELFLPHIPLADLTPG-SVIGKVEAADGDKGDRVTLSLR 184
           + V +VND  P F   +Y      I + + TP  S I +V A D D G+   L+ R
Sbjct: 435 VEVQDVNDNPPIFEKTEYS-----IKVIESTPSNSQIVQVTAVDADTGNNARLTYR 485



 Score = 46.2 bits (108), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 41/145 (28%), Positives = 69/145 (47%), Gaps = 16/145 (11%)

Query: 95  GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFL 151
           G+I+    LD ET+  Y   V A D      ++  ++ + +++VND  P    PQ ++  
Sbjct: 619 GEITTRDSLDRETKSDYDLVVEARDQGTPYRSSRISIKVKILDVNDNAPDIVDPQEDV-- 676

Query: 152 PHIPLADLTP-GSVIGKVEAADGDKGDRVTLS---LRGPYEK---MFSINDSGHI--SIV 202
             + + +  P G+ + +V A D D G   +++   L+G       MFSI+    +  + V
Sbjct: 677 --VSVREEQPIGTEVVRVRAIDRDNGANASITYSILKGRDSDGYGMFSIDPISGVLRTKV 734

Query: 203 DLSALNTSTIQLVVVATDTGNPPRQ 227
            L     +  +L V ATD G PPRQ
Sbjct: 735 SLDHEEKTIYRLAVAATDNGKPPRQ 759



 Score = 43.5 bits (101), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 56/210 (26%), Positives = 93/210 (44%), Gaps = 18/210 (8%)

Query: 29  ATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLR---VKYWL-SND 84
           A + +S    + R   F K  Y+    E++  N V+ TV+ +         ++Y++ S D
Sbjct: 220 AEVFISVIDATQRPPIFDKPRYTYYVKEDVKKNTVVGTVSASSSNSGSRSSIRYFIYSGD 279

Query: 85  YGERFSISR-QGDISLMQCLDYETEDSYRFTVYAT--DTLMTTSATVNISVVNVNDWDPR 141
               F+I    G+I +   LD+ET+      + AT  D        VNI + +VND  P 
Sbjct: 280 PDGYFAIDPVSGNIRVASTLDHETKPQVLLNIQATSGDPPAYGHTQVNIDIEDVNDNPPE 339

Query: 142 FRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR----GPY-EKMFSIND- 195
           F      + +P     ++  GS +    A D D G    ++ R    GP    +F+++  
Sbjct: 340 FESSTVRISVPE----NVEIGSPLYAANAHDKDSGMSGVITYRLSNNGPSTSSLFAVDSR 395

Query: 196 SGHISIVD-LSALNTSTIQLVVVATDTGNP 224
           SGH+S+   L    T    L+V A+D+G P
Sbjct: 396 SGHLSLARPLDYETTQRHMLIVTASDSGIP 425



 Score = 40.0 bits (92), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 60/219 (27%), Positives = 88/219 (40%), Gaps = 26/219 (11%)

Query: 27   ALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYG 86
             L  L V      L  L+F  N Y V+ +EN P+   +L +   +    R K   S   G
Sbjct: 1538 GLIELRVGDLQQELPALRFQNNSYKVNLVENTPIGQTVLHLNAVRSDGRRQKIIYSFGSG 1597

Query: 87   ER---FSISR-QGDISLM--QCLDYE-----TEDSYRFTVYA-TDT--LMTTSATVNISV 132
                 FSI    G+I +   Q LDYE       D     V A TD   L+    ++ + +
Sbjct: 1598 NEDGTFSIDAVTGEIKIRNSQNLDYERFSRLKSDGIELVVVARTDGSPLLYGYCSIKVEL 1657

Query: 133  VNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTL---SLRGPYEK 189
             + ND  PRF   QY   +          G+ + KV A D D+G    +    + G ++ 
Sbjct: 1658 QDENDNSPRFTQQQYSASV----WEGNNKGAFVIKVGAFDADQGSNAHILYHIVDGNHDN 1713

Query: 190  MFSINDSGHISIVDLSALNTSTI----QLVVVATDTGNP 224
             F I +     IV  + +    I    +L V+ATD G P
Sbjct: 1714 AFII-EPAFSGIVKTNIVLDREIRDKYKLKVIATDEGVP 1751



 Score = 39.3 bits (90), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 20/44 (45%), Positives = 27/44 (61%), Gaps = 3/44 (6%)

Query: 102  CLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRF 142
             LD E  D Y+  V ATD     MT +AT+N+++V+VND  P F
Sbjct: 1730 VLDREIRDKYKLKVIATDEGVPQMTGTATINVNIVDVNDNQPTF 1773



 Score = 38.5 bits (88), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 56/209 (26%), Positives = 91/209 (43%), Gaps = 31/209 (14%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWLSNDYGERFSI--SRQGDIS 98
            +F ++ Y V+  E++P    ++ V+     D     + Y +    GE   +  S +G ++
Sbjct: 1122 RFLESVYHVNISESVPTGSFVVRVSAKSSNDNGNANLTYEIPKGVGEDHFVVDSVRGIVT 1181

Query: 99   LMQCLDYETEDSYRFTVYATDTLMTTS--------------ATVNISVVNVNDWDPRFRY 144
                 D E++D Y   +Y T+     S              AT+ + V +VND  P F  
Sbjct: 1182 TRGTFDRESKDMYTIPIYVTEQNRFKSAGSGTSKDISQFDIATLVVRVTDVNDHAPEF-L 1240

Query: 145  PQ--YELFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGP-YEKMFSIN-DSGH 198
            P   Y L +P    +DL   SVI  V A+D D+G    +T S+ G      FSI+ ++G 
Sbjct: 1241 PGSCYPLAVPE--NSDL---SVIHTVAASDADEGLNGEITYSISGGNIGNKFSIDINTGA 1295

Query: 199  ISIVDLSALNTSTIQLVVVATDTGNPPRQ 227
            I+   L     +   L + A D G+P  Q
Sbjct: 1296 ITARPLDREVHARYVLQITAQDRGSPTSQ 1324


>gi|432843796|ref|XP_004065669.1| PREDICTED: protocadherin Fat 4-like [Oryzias latipes]
          Length = 1575

 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 57/182 (31%), Positives = 89/182 (48%), Gaps = 11/182 (6%)

Query: 43   LQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGERFSISRQGDISLMQC 102
            + F K+ Y+ S  EN P    +  V+ +   +L    ++   +GE FSIS  G I     
Sbjct: 1183 VAFLKSSYNFSLSENQPEGTAVGQVSASSGSNLYNVSYVLKTHGELFSISSDGSILTSAE 1242

Query: 103  LDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWD--PRFRYPQYELFLPHI-PLADL 159
            LD E ++ Y   V A DT    ++ V +  V V D +  P+F    YE  + +I P    
Sbjct: 1243 LDKEEQEWYILEVEAVDTRTPPTSAVTMVRVRVEDVNEPPKFTEEVYEAAVINIAPYK-- 1300

Query: 160  TPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSIN-DSGHISIVDLSALNTSTIQLVVVA 218
            TP   + +V+A+D D G++   SL       F I+ DSG + +V  + L+  +I+L V A
Sbjct: 1301 TP---VTQVKASDPDVGEQPKYSLSD--SSAFGIDEDSGQVYVVSAAGLDGESIELEVKA 1355

Query: 219  TD 220
            TD
Sbjct: 1356 TD 1357



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 56/194 (28%), Positives = 93/194 (47%), Gaps = 13/194 (6%)

Query: 44   QFSKNEYSVSALENLP--VNYVLLTVTTNKPRDLRVKYWLSNDYGERFSISRQGDISLMQ 101
            +F++  Y VS  ENL    + +LL VT          ++L +   + F I++QG +SL +
Sbjct: 869  EFNQELYEVSISENLASGASILLLEVTDRDEGGFSNGHFLVSP-SDTFEINKQGVVSLKK 927

Query: 102  --CLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
               LD ET+D Y   V A D     ++ +A + ++V++ ND  P+F      L +     
Sbjct: 928  NVTLDRETKDKYNLEVVAVDQPTEGLSATAQLEVTVLDYNDNTPQFPSIPDPLEIREGSY 987

Query: 157  ADLTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSINDSGHI-SIVDLSALNTSTIQ 213
                PG ++  V   D D G    VTLS   P+  +F   + G + ++  L    T T +
Sbjct: 988  TPEAPGEILAIV-PTDADLGSNGEVTLSFVTPH-PLFRFREDGMLLAVAPLDRETTDTYE 1045

Query: 214  LVVVATDTGNPPRQ 227
            L + A+D G+P R+
Sbjct: 1046 LFIKASDNGSPQRE 1059



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 48/149 (32%), Positives = 72/149 (48%), Gaps = 10/149 (6%)

Query: 86  GERFSISRQGDISLMQCLDY-ETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRY 144
           G++FSIS  G+++    LD+ E    Y   +  TD   T +A V +SV ++ND  P F  
Sbjct: 602 GDKFSISNNGELTTSVKLDFDEAPHDYSVGISITDGTTTDNAVVEVSVTDINDNSPVFAS 661

Query: 145 PQYELFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIND-SGHISI 201
                 +P     D    S I  V A D D G    +  SLRG  E  FSI+  SG +S+
Sbjct: 662 ESVTEVVPE----DAEVPSNITVVAATDKDSGFNKEIRYSLRGG-EGRFSIDPLSGMVSL 716

Query: 202 V-DLSALNTSTIQLVVVATDTGNPPRQAS 229
           + +L     +   ++V+A D G P + A+
Sbjct: 717 IGELDRETKAEYTVLVLAEDQGRPVKSAT 745



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 43/156 (27%), Positives = 74/156 (47%), Gaps = 11/156 (7%)

Query: 89   FSISRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYP 145
            F     G +  +  LD ET D+Y   + A+D          ++ + +++VND  P F   
Sbjct: 1022 FRFREDGMLLAVAPLDRETTDTYELFIKASDNGSPQRENITSITVRLLDVNDNKPEFSLS 1081

Query: 146  QYELFLPHIPLADLTPGSVIGKVEAADGDKGDR--VTLSLRGPYEKMFSIN-DSGHISIV 202
             Y      + L D   G+V+ K+ A D D G+   +T S      K  ++N +SG +++ 
Sbjct: 1082 SYVS---SLLLKDAEEGTVVLKLSATDPDSGNNSMITYSFSKGSSKYLALNGESGEVTLT 1138

Query: 203  -DLSALNTSTI-QLVVVATDTGNPPRQASVPAIMHF 236
             ++SAL   T+ +L  +ATD G PP  ++    +H 
Sbjct: 1139 SEVSALTEDTVVELTAMATDHGEPPLNSTAAVEIHL 1174



 Score = 47.8 bits (112), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 61/235 (25%), Positives = 106/235 (45%), Gaps = 17/235 (7%)

Query: 16  RAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLL-TVTTNKPRD 74
           +A Q D++ + A A + V+    +     F  N Y ++ LEN PV+ V+   + T+    
Sbjct: 323 KAAQTDDRLKTADAVVSVTVQDINDNAPTFDTNNYDITFLENSPVDAVVFKAIVTDLDEG 382

Query: 75  LRVKYWLSNDYGERFSISRQGDISLMQC--LDYETEDSYRFTVYATDTLM---TTSATVN 129
             V           FS+   G + +     LD ET ++  F + AT+T +    T+A V 
Sbjct: 383 GFVGTLRILPDSAPFSVDPDGTVRVKDSAVLDRETIEAIVFQIEATETDVPNHVTTAQVT 442

Query: 130 ISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEA--ADGDKGDRVTLSLR-GP 186
           +++ + ND  P F    YE  +    + D+     + +VEA   D D   ++  S+  G 
Sbjct: 443 VTLTDENDNSPTFSSSMYEGEVTADQVVDME----LVQVEANDPDADINGQIKYSIEFGN 498

Query: 187 YEKMFSIN-DSGHISIVDLSALNTSTI---QLVVVATDTGNPPRQASVPAIMHFP 237
            E  FS++ D+G I++     L  + I    L + ATD G  PR ++   ++  P
Sbjct: 499 SEGYFSMDEDTGAITLAKTIPLQENKILEFPLYITATDRGIVPRTSAAQVLIRAP 553


>gi|358331936|dbj|GAA36964.2| protocadherin-1 [Clonorchis sinensis]
          Length = 1214

 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 48/168 (28%), Positives = 80/168 (47%), Gaps = 33/168 (19%)

Query: 46  SKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYG---------------- 86
           ++ +++V+  E  PVN ++LTVT    +   + R+ Y L    G                
Sbjct: 505 TEGQFNVTISEAEPVNSIILTVTAEDEDSGENARIAYSLYELRGKATHSSTQANSTPATF 564

Query: 87  -ERFSISRQ-GDISLMQCLDYETEDSYRFTVYATDT-------LMTTSATVNISVVNVND 137
            E F IS+  G + L++ LDYE  +   F V A D          T SA ++++++NVND
Sbjct: 565 KEYFKISKDTGSLFLIKRLDYELINQMDFGVRAMDNPRGSDNERKTASAQIHVTILNVND 624

Query: 138 WDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRG 185
             P    P +   + H+P+     G+ +G V+  D D G+ VT+ +RG
Sbjct: 625 NPPVLISPSHFTVVEHLPI-----GTKVGFVQFVDADNGNDVTVEVRG 667


>gi|66773396|ref|NP_001019288.1| protocadherin 1 gamma 18 precursor [Danio rerio]
 gi|50881518|gb|AAT85339.1| protocadherin cluster 1 gamma 18 [Danio rerio]
          Length = 934

 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 51/193 (26%), Positives = 90/193 (46%), Gaps = 16/193 (8%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRDLR--VKYWLSN---DYGERFSI-SRQGDIS 98
           FS++ Y  S +EN P + V++ V+     +    ++Y+  +        FSI +  GD+ 
Sbjct: 243 FSQSSYKTSIVENAPKSTVVIRVSATDADESSHGIQYYFEHATPTVKALFSIDADSGDVK 302

Query: 99  LMQCLDYETEDSYRFTVYATD-TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLA 157
           +   +DYE    ++  V A D   +T S+ + I V++VND  P+     +   +      
Sbjct: 303 VTGQIDYEKHKQFKIKVKAKDHGGLTDSSEIIIDVIDVNDNKPKITIMSFSSAVSE---- 358

Query: 158 DLTPGSVIGKVEAADGDKGDRVTLS----LRGPYEKMFSI-NDSGHISIVDLSALNTSTI 212
           D  PG+VI  +   D D GD   +S    L  P++ + S+ N    ++  +L    T+  
Sbjct: 359 DAAPGTVIAMINVQDLDSGDNSKISCSIDLNSPFKIISSLTNYYNLVTDSELDREQTAEY 418

Query: 213 QLVVVATDTGNPP 225
            + + A D GNPP
Sbjct: 419 NITITAVDGGNPP 431



 Score = 45.4 bits (106), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 61/227 (26%), Positives = 97/227 (42%), Gaps = 36/227 (15%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTTNKPRDL------RVKYWLSND------YGERFSI 91
           QF +  Y+    EN P +  +LTV   K  D+      +V Y+L +            SI
Sbjct: 451 QFVQESYNAFIAENNPPSTTILTV---KAEDMDWGPNAKVSYFLIDADLNGAPLASYISI 507

Query: 92  -SRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQY 147
            S  G +   +  DYE   S++  V A D     ++++ T+NI + + ND  P+  YP  
Sbjct: 508 NSESGVVYAEKSFDYEQLKSFKMQVKAQDGGSPPLSSNVTLNIIIQDQNDNAPQVLYP-- 565

Query: 148 ELFLPHIPLADLTP-----GSVIGKVEAADGDKGDRVTLSL---RGPYEKMFSIN-DSGH 198
            +      +A++ P     G ++ KV A D D G    LS    + P   +F +   +G 
Sbjct: 566 -VQTGASVVAEIVPRAADVGYLVTKVVAVDVDSGQNAWLSYKLQKAPDRALFEVGLQNGE 624

Query: 199 ISIV-DLSALNTSTIQLVVVATDTGNPPRQA----SVPAIMHFPEAI 240
           I  V  ++  +    +L VV  D G P R A    +V     FPE +
Sbjct: 625 IRTVRQVTDKDAVKQKLTVVVEDNGQPSRSAVVSINVAVADSFPEVL 671


>gi|395814685|ref|XP_003780875.1| PREDICTED: protocadherin Fat 3 isoform 2 [Otolemur garnettii]
          Length = 4589

 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 64/197 (32%), Positives = 92/197 (46%), Gaps = 17/197 (8%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPR---DLRVKYWLSNDYGERFSI-SRQGDISLM 100
            FS + Y+    EN     +L  V    P    + +V Y L++  G  FSI S  G + L 
Sbjct: 3131 FSSDHYNACVYENTATKALLTRVQAVDPDVGINRKVVYSLADSAGGVFSIDSWSGIVILE 3190

Query: 101  QCLDYETEDSYRFTVYATD----TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
            Q LD E + SY  +V ATD      +++ A V I+V+++ND  P F    Y + +P    
Sbjct: 3191 QPLDREQQPSYNISVQATDQSPGQSLSSLAIVTITVLDINDNPPVFERRDYLVTVPE--- 3247

Query: 157  ADLTPGSVIGKVEAADGDKGD--RVTLSLR-GPYEKMFSIN-DSGHISIVD-LSALNTST 211
             D +PG+ +  V A   D G    +T  +R G  +  FSIN  +G IS+ + L       
Sbjct: 3248 -DTSPGTQVLAVFATSKDIGTNAEITYLIRSGNEQGKFSINPKTGGISVSEVLDYELCKR 3306

Query: 212  IQLVVVATDTGNPPRQA 228
              LVV A D G P   A
Sbjct: 3307 FYLVVEAKDGGTPALSA 3323



 Score = 58.9 bits (141), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 68/204 (33%), Positives = 95/204 (46%), Gaps = 25/204 (12%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDL----RVKYWLSNDYGERFSISR-QGDISL 99
            F    YSV  LE+LP+  V+  + T+ P DL    +V+Y L NDY  RF I +  G I L
Sbjct: 936  FIPTSYSVKVLEDLPIGTVIAWLETHDP-DLGLGGQVRYSLVNDYNGRFEIDKASGAIRL 994

Query: 100  MQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIP---- 155
             + LDYE +  Y  TV A D          +S+ +V+  +         L  P+ P    
Sbjct: 995  SKELDYEKQQFYNLTVRAKDKGRP------VSLSSVSFVEVEVVDVNENLHTPYFPDFAV 1048

Query: 156  LADLTPGSVIG----KVEAADGDKG--DRVTLSLR-GPYEKMFSIND-SGHISIVD-LSA 206
            +  +   S IG    +V A D D G    +  S+R G     FSI+D SG I+  D L  
Sbjct: 1049 VGSVKENSRIGTSVLQVTARDEDPGRDGEIQYSIRDGSGLGRFSIDDESGVITAADILDR 1108

Query: 207  LNTSTIQLVVVATDTGNPPRQASV 230
              TS+  L V ATD G  P  +++
Sbjct: 1109 ETTSSYWLTVYATDRGVVPLYSTI 1132



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 42/137 (30%), Positives = 60/137 (43%), Gaps = 8/137 (5%)

Query: 103  LDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPG 162
            LD E +D Y   + ATD L  T A V ++V +VND  P      Y    P     D+   
Sbjct: 2990 LDREEQDMYFLNITATDGLFVTQAMVEVTVSDVNDNSPVCDQVAYTALFPE----DIPSN 3045

Query: 163  SVIGKVEAADGDKGDR--VTLSLRGPYEKMFSIN-DSGHI-SIVDLSALNTSTIQLVVVA 218
             +I KV A D D G    +  SL GP    F ++ +SG + ++  L         L+  A
Sbjct: 3046 KIILKVSAKDADIGSNGDIRYSLYGPGNNEFFLDPESGELKTLALLDRERVPVYNLIARA 3105

Query: 219  TDTGNPPRQASVPAIMH 235
            TD G    Q+ +  I+ 
Sbjct: 3106 TDGGGRFCQSDIRLILE 3122



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 59/193 (30%), Positives = 92/193 (47%), Gaps = 16/193 (8%)

Query: 43  LQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLS-NDYGERFSIS-RQGDISLM 100
           ++F K  Y V   E  P   V++ V  + P  L V+Y LS  +  E F I+ R G I   
Sbjct: 374 VRFEKEMYDVRVSEFSPPGVVVVIVKLS-PEPLDVEYKLSPGEDAEYFKINPRSGLIVTA 432

Query: 101 QCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFL-PHIPLADL 159
           Q L+   ++ Y+  V  T+      A V I + + ND  P F+  QY+ ++   +P+   
Sbjct: 433 QPLNTVKKEVYKLEV--TNKEGDLRAQVVIGIEDANDHTPEFQQAQYDTYVNESVPV--- 487

Query: 160 TPGSVIGKVEAADGDKGDR--VTLSLRGPYEKMFSIND-SGHISIVDLSALNTS--TIQL 214
             G+ I  V A D DKG+   +T S+       F+IN  +G IS  +     +S  T + 
Sbjct: 488 --GTSILTVSAFDKDKGENGYITYSIASLNLLPFAINQFTGVISTTEELDFESSPETYRF 545

Query: 215 VVVATDTGNPPRQ 227
           +V A+D G+P R 
Sbjct: 546 IVRASDWGSPYRH 558



 Score = 48.1 bits (113), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 63/214 (29%), Positives = 95/214 (44%), Gaps = 28/214 (13%)

Query: 53   SALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYG-ERFSISRQ-GDISLMQCLDYET 107
            S  EN  +   +L VT    +  RD  ++Y + +  G  RFSI  + G I+    LD ET
Sbjct: 1051 SVKENSRIGTSVLQVTARDEDPGRDGEIQYSIRDGSGLGRFSIDDESGVITAADILDRET 1110

Query: 108  EDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSV 164
              SY  TVYATD     + ++  V I V +VND  P    P   ++ P +        SV
Sbjct: 1111 TSSYWLTVYATDRGVVPLYSTIEVYIEVEDVNDNAPLTSEP---IYYPAVMENSPKDVSV 1167

Query: 165  IGKVEAADGDKGDRVTLSLR---GPYEKMFSIN-DSGHISIVD--LSALNTSTIQLVVVA 218
            I +++A D D      L+ R   G  +  F+IN  +G I+     L     +   L V  
Sbjct: 1168 I-QIQAEDPDSSSSEKLTYRITSGNPQNFFAINIKTGLITTTSRKLDREQQAEHFLEVTV 1226

Query: 219  TDTGNPPRQASVPAIM----------HFPEAIVQ 242
            TD G  P+Q+++  ++           FPE + Q
Sbjct: 1227 TDGGPSPKQSTIWVVVQVQDENDNKPQFPEKVYQ 1260



 Score = 45.1 bits (105), Expect = 0.065,   Method: Compositional matrix adjust.
 Identities = 40/146 (27%), Positives = 66/146 (45%), Gaps = 9/146 (6%)

Query: 95   GDISLMQCLDYETEDSYRFTVYATDTL-MTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
            G ++  + LDYE   SY+  + AT+   M ++ATVNI +V+ ND  P F + QY   L  
Sbjct: 1721 GVVTTRKALDYERTSSYQLIIQATNMAGMASNATVNIQIVDENDNAPVFLFSQYSGSLSE 1780

Query: 154  IP-----LADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSGHISIVDLSALN 208
                   + +L    ++ +   AD ++   +   +     K F   DS   +I  ++ L+
Sbjct: 1781 AAPVNSIVRNLDNSPLVIRATDADSNRNALLVYQIVESMAKKFFTVDSSTGAIRTIANLD 1840

Query: 209  TSTI---QLVVVATDTGNPPRQASVP 231
              TI      V   D+G+P   A  P
Sbjct: 1841 HETIAHFHFHVHVRDSGSPQLTAESP 1866



 Score = 42.0 bits (97), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 41/146 (28%), Positives = 72/146 (49%), Gaps = 23/146 (15%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDL------RVKYWLSNDYG-----ERFSI-S 92
            F  + Y    +E +PV   L  V   + +D+      +V Y L +D       E FSI S
Sbjct: 2814 FETSSYETIIMEGMPVGTKLTQV---RAQDVDWGANGQVTYSLHSDSQPEKVMEAFSIDS 2870

Query: 93   RQGDISLMQCLDYETEDSYRFTVYATDT----LMTTSATVNISVVNVNDWDPRFRYPQYE 148
              G IS ++ LD+ET+  + F+V A+D      ++++  V++ V ++ND  P F    +E
Sbjct: 2871 NTGWISTLKDLDHETDPEFTFSVLASDLGEAFSLSSTTVVSVKVTDINDNAPVF---AHE 2927

Query: 149  LFLPHIPLADLTPGSVIGKVEAADGD 174
            ++  ++  +D  PG V+  +   D D
Sbjct: 2928 VYRGNVKESD-PPGEVVAVLSTWDRD 2952



 Score = 41.6 bits (96), Expect = 0.66,   Method: Compositional matrix adjust.
 Identities = 53/203 (26%), Positives = 94/203 (46%), Gaps = 17/203 (8%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSN-DYGERFSIS-RQGDISLMQC 102
            F K  Y+ S  E++ V+  +L++    P    + Y + + D  ++F+I    G + ++  
Sbjct: 2186 FDKPFYTASIDEDIRVDTPILSINATSPEGQGIIYIIIDGDPFKQFNIDFDTGVLKVVSP 2245

Query: 103  LDYETEDSYRFTVYATDTLMTTSA--TVNISVVNVNDWDPRFRYPQYELFLPHIPLADLT 160
            LDYE    Y+ T+ A+D+L    A  TV++ V +VND  P F  P Y   L    L    
Sbjct: 2246 LDYEATSVYKLTIRASDSLTGARAEVTVDLLVNDVNDNPPIFDQPTYNTTLSEASLI--- 2302

Query: 161  PGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSGHIS-----IVDLSALNTSTIQ-- 213
             G+ + +V + D D  +   +  +   +  ++  D  HI      I+    L+  ++Q  
Sbjct: 2303 -GTPVLQVVSTDADSENNKMVHYQ-IVQDTYNSTDYFHIDSTSGLILTARMLDHESVQHC 2360

Query: 214  -LVVVATDTGNPPRQASVPAIMH 235
             L V +TD+G P   + V   +H
Sbjct: 2361 TLKVRSTDSGFPSLSSEVLVHIH 2383



 Score = 40.8 bits (94), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 63/215 (29%), Positives = 96/215 (44%), Gaps = 25/215 (11%)

Query: 43   LQFSKNEYSVSALEN-LPVNYVLLTVTTNKPRDLRVKYWLSNDYGERFSI-SRQGDISLM 100
            L F+++ YS S  EN   +  V +        +  +KY + N  G +F I S  G I   
Sbjct: 1980 LHFTQSFYSTSISENNTNITKVAIVNAVGNRLNEPLKYSILNP-GNKFKIKSTSGVIQTT 2038

Query: 101  QC-LDYETEDSYRFTVYAT---DTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
                D E ++ Y   V A+   D L      V +S+ ++ND  P F      + LP+   
Sbjct: 2039 GVPFDREEQEIYELVVEASRELDLLRVARVVVRVSIEDINDNSPVF------VGLPYYAA 2092

Query: 157  A--DLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIN-DSGHISIVDLSALNTST 211
               D  PG++I +V A D DKG    VT  L+  Y   F IN +SG++ + +    + S 
Sbjct: 2093 VQVDAEPGTLIYQVTAIDKDKGANGEVTYVLQDDY-GHFEINPNSGNVILKEAFNSDLSN 2151

Query: 212  IQ--LVVVATDTGNPPRQASVPAIMHFPEAIVQQA 244
            I+  + ++A D G P    SV      P  IV +A
Sbjct: 2152 IEYGVTILAKDGGKPSLSTSV----ELPITIVNKA 2182



 Score = 40.8 bits (94), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 53/196 (27%), Positives = 92/196 (46%), Gaps = 22/196 (11%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKY----WLSNDYGERFSISRQ-GDISL 99
            F++++YS +  E+  +   + T+     +++R          N+ G  F I ++ G I L
Sbjct: 2708 FTQSQYSFAIAEDTAIGTTVDTLRVLPSQNVRFSTVNGDRPENNRGGVFIIEQETGTIKL 2767

Query: 100  MQCLDYETEDSYRFTVYATDTL----MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIP 155
             + LD+E   ++ F   AT  L    +  +  V+I V+++ND  P F    YE  +    
Sbjct: 2768 DKRLDHEATPAFHFKAAATVPLDKIDIVFTVDVDIKVLDLNDNKPVFETSSYETII---- 2823

Query: 156  LADLTPGSVIGKVEAADGDKG--DRVTLSLRG---PYEKM--FSIN-DSGHISIV-DLSA 206
            +  +  G+ + +V A D D G   +VT SL     P + M  FSI+ ++G IS + DL  
Sbjct: 2824 MEGMPVGTKLTQVRAQDVDWGANGQVTYSLHSDSQPEKVMEAFSIDSNTGWISTLKDLDH 2883

Query: 207  LNTSTIQLVVVATDTG 222
                     V+A+D G
Sbjct: 2884 ETDPEFTFSVLASDLG 2899



 Score = 39.3 bits (90), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 53/220 (24%), Positives = 90/220 (40%), Gaps = 19/220 (8%)

Query: 12   TLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVN-YVLLTVTTN 70
            +L+V+A+        + ATL +  +  +     F+   Y+    EN PV   +L  V T+
Sbjct: 3413 SLLVQAVDSGIPAMSSTATLNIDISDVNDNSPVFTPANYTAVIQENKPVGTSILQLVVTD 3472

Query: 71   K-------PRDLRVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDTLMT 123
            +       P    +   LS +  E F +   G +       +     Y   V A D+   
Sbjct: 3473 RDSFHNGPPFSFSI---LSGNEEEEFMLDPHGILRSAVVFQHTESPEYVLCVQAKDSGKP 3529

Query: 124  TSATVNISVVNVNDWDPRFRYPQ---YELFLPHIPLADLTPGSVIGKVEAADGDKGDRVT 180
              A+   S + V   +     P     E+F+  + + D  PG VIGK+ A D D  D +T
Sbjct: 3530 QQASR--SFIRVRVIEESIHKPTAIPLEIFI--VTMEDDFPGGVIGKIHATDQDMYDVLT 3585

Query: 181  LSLRGPYEKMFSINDSGHISIVDLSALNTSTIQLVVVATD 220
             +L+   + +F +N S    I+ L  L++    L V  +D
Sbjct: 3586 FALKSEQKSLFKVN-SHDGKIIALGGLDSGKYVLNVSVSD 3624



 Score = 38.9 bits (89), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 26/94 (27%), Positives = 44/94 (46%), Gaps = 4/94 (4%)

Query: 95   GDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHI 154
            G I + + LD E    Y  +V  TD        V I V++ ND  P F  P Y++ +   
Sbjct: 1413 GTIVIAKPLDAEQRSIYNMSVEVTDGTNVAVTQVFIKVLDNNDNGPEFSQPNYDVTISE- 1471

Query: 155  PLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYE 188
               D+ P + I ++EA D D+  +++ ++    E
Sbjct: 1472 ---DVLPDTEILQIEATDRDEKHKLSYTIHSSIE 1502



 Score = 38.5 bits (88), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 53/201 (26%), Positives = 80/201 (39%), Gaps = 18/201 (8%)

Query: 44   QFSKNEYSVSALEN-LPVNYVLLTVTTNKPRDLRVKYWLSNDYG----ERFSIS-RQGDI 97
            +FS+  Y V+  E+ LP   +L    T++    ++ Y + +        +F I    G +
Sbjct: 1459 EFSQPNYDVTISEDVLPDTEILQIEATDRDEKHKLSYTIHSSIESSSMRKFRIDPSTGVL 1518

Query: 98   SLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHI 154
               + LD+E +D +   V   D         A V ++V + ND  P F  P YE  +   
Sbjct: 1519 YTAERLDHEAQDKHILNVMVRDQEFPYRRNLARVIVNVEDANDHSPYFTNPLYEASV--- 1575

Query: 155  PLADLTPGSVIGKVEAADGDKGDRVTLSL---RGPYEKMFSINDSGHISIVDLSALNTST 211
                   GS + +V A D DKG+   L      G     F I     I  V      T+ 
Sbjct: 1576 -FESAALGSAVLQVTALDKDKGENAELIYTIEAGNTGNTFKIEPVLGIITVSKEPDMTTM 1634

Query: 212  IQLV--VVATDTGNPPRQASV 230
             Q V  V  TD G+PP  A+ 
Sbjct: 1635 GQFVLSVRVTDQGSPPMSATA 1655



 Score = 37.7 bits (86), Expect = 8.8,   Method: Compositional matrix adjust.
 Identities = 33/107 (30%), Positives = 56/107 (52%), Gaps = 10/107 (9%)

Query: 45   FSKNEYSVSALENL-PVNYVLLTVTTNKP--RDLRVKYWL--SNDYGERFSIS-RQGDIS 98
            F + +Y V+  E+  P   VL    T+K    +  + Y +   N+ G +FSI+ + G IS
Sbjct: 3236 FERRDYLVTVPEDTSPGTQVLAVFATSKDIGTNAEITYLIRSGNEQG-KFSINPKTGGIS 3294

Query: 99   LMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRF 142
            + + LDYE    +   V A D     ++  ATV++++ +VND  P+F
Sbjct: 3295 VSEVLDYELCKRFYLVVEAKDGGTPALSAVATVSVTLTDVNDNPPKF 3341


>gi|68533589|gb|AAH98574.1| Protocadherin beta 7 [Homo sapiens]
          Length = 793

 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 54/176 (30%), Positives = 80/176 (45%), Gaps = 27/176 (15%)

Query: 95  GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFL 151
           G +  ++ LDYE   ++ F V ATD     +++ A V + V++ ND  P   YP      
Sbjct: 511 GHLFALRSLDYEALQAFEFRVGATDRGSPALSSEALVRVLVLDANDNSPFVLYPLQNSSA 570

Query: 152 PH---IPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSI-NDSGHISIVD- 203
           P    +P A   PG ++ KV A DGD G    LS   L+     +F +   +G +     
Sbjct: 571 PCTEPLPRA-AEPGYLVTKVVAVDGDSGQNAWLSYQLLKATEPGLFGVWAHNGEVRTARL 629

Query: 204 LSALNTSTIQLVVVATDTGNPPRQASVPAIMH-------------FPEAIVQQASS 246
           LS  + +  +LVV+  D G PPR A+  A +H              PEA   QA+S
Sbjct: 630 LSERDAAKQRLVVLVKDNGEPPRSAT--ATLHVLLVDGFSQPYLRLPEAAPDQANS 683



 Score = 40.8 bits (94), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 44/137 (32%), Positives = 59/137 (43%), Gaps = 21/137 (15%)

Query: 103 LDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADL 159
           LD E    Y  T+  TD     + T   + + V +VND  P F    Y LF+      + 
Sbjct: 409 LDRERNTEYNITITVTDLGTPRLKTEHNITVLVSDVNDNAPAFTQTSYTLFVRE----NN 464

Query: 160 TPGSVIGKVEAADGDKGD--RVTLSL------RGPYEKMFSIN-DSGH---ISIVDLSAL 207
           +P   IG V A D D G   +V  SL        P   + SIN D+GH   +  +D  AL
Sbjct: 465 SPALPIGSVSATDRDSGTNAQVIYSLLPSQDPHLPLTSLVSINADNGHLFALRSLDYEAL 524

Query: 208 NTSTIQLVVVATDTGNP 224
                +  V ATD G+P
Sbjct: 525 Q--AFEFRVGATDRGSP 539


>gi|11036656|ref|NP_061763.1| protocadherin beta-7 precursor [Homo sapiens]
 gi|13431373|sp|Q9Y5E2.1|PCDB7_HUMAN RecName: Full=Protocadherin beta-7; Short=PCDH-beta-7; Flags:
           Precursor
 gi|5457049|gb|AAD43761.1|AF152500_1 protocadherin beta 7 [Homo sapiens]
 gi|14009463|gb|AAK51617.1|AF217750_1 protocadherin-beta7 [Homo sapiens]
 gi|119582381|gb|EAW61977.1| protocadherin beta 7 [Homo sapiens]
 gi|120660168|gb|AAI30332.1| Protocadherin beta 7 [Homo sapiens]
 gi|189054680|dbj|BAG37530.1| unnamed protein product [Homo sapiens]
          Length = 793

 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 54/176 (30%), Positives = 80/176 (45%), Gaps = 27/176 (15%)

Query: 95  GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFL 151
           G +  ++ LDYE   ++ F V ATD     +++ A V + V++ ND  P   YP      
Sbjct: 511 GHLFALRSLDYEALQAFEFRVGATDRGSPALSSEALVRVLVLDANDNSPFVLYPLQNSSA 570

Query: 152 PH---IPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSI-NDSGHISIVD- 203
           P    +P A   PG ++ KV A DGD G    LS   L+     +F +   +G +     
Sbjct: 571 PCTEPLPRA-AEPGYLVTKVVAVDGDSGQNAWLSYQLLKATEPGLFGVWAHNGEVRTARL 629

Query: 204 LSALNTSTIQLVVVATDTGNPPRQASVPAIMH-------------FPEAIVQQASS 246
           LS  + +  +LVV+  D G PPR A+  A +H              PEA   QA+S
Sbjct: 630 LSERDAAKQRLVVLVKDNGEPPRSAT--ATLHVLLVDGFSQPYLRLPEAAPDQANS 683



 Score = 40.8 bits (94), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 44/137 (32%), Positives = 59/137 (43%), Gaps = 21/137 (15%)

Query: 103 LDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADL 159
           LD E    Y  T+  TD     + T   + + V +VND  P F    Y LF+      + 
Sbjct: 409 LDRERNTEYNITITVTDLGTPRLKTEHNITVLVSDVNDNAPAFTQTSYTLFVRE----NN 464

Query: 160 TPGSVIGKVEAADGDKGD--RVTLSL------RGPYEKMFSIN-DSGH---ISIVDLSAL 207
           +P   IG V A D D G   +V  SL        P   + SIN D+GH   +  +D  AL
Sbjct: 465 SPALPIGSVSATDRDSGTNAQVIYSLLPSQDPHLPLASLVSINADNGHLFALRSLDYEAL 524

Query: 208 NTSTIQLVVVATDTGNP 224
                +  V ATD G+P
Sbjct: 525 Q--AFEFRVGATDRGSP 539


>gi|417407147|gb|JAA50198.1| Putative cadherin egf lag seven-pass g-type receptor [Desmodus
            rotundus]
          Length = 4593

 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 45/145 (31%), Positives = 70/145 (48%), Gaps = 8/145 (5%)

Query: 90   SISRQGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYEL 149
            ++  +  + + + LD E +DSY  TV ATD    + A V + V++ ND  P      Y  
Sbjct: 2969 NVQSEWKVYVKEPLDRERQDSYLLTVTATDGTFASKAIVEVKVLDANDNSPVCEKTLYSD 3028

Query: 150  FLPHIPLADLTPGSVIGKVEAADGD--KGDRVTLSLRGPYEKMFSIN-DSGHI-SIVDLS 205
             +P     D  PG +I +V A D D      +T +L GP  + F +N D+G + ++  L 
Sbjct: 3029 TIPE----DAFPGKLIMQVSATDADIRSNAEITYTLFGPGAEKFKLNPDTGELKTLAPLD 3084

Query: 206  ALNTSTIQLVVVATDTGNPPRQASV 230
                +   LVV ATD G    QA++
Sbjct: 3085 REEQAVYHLVVKATDGGGRFCQANI 3109



 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 84/179 (46%), Gaps = 14/179 (7%)

Query: 13   LVVRAIQYDNQDRYALATL---IVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTT 69
            L ++A+      +++   L    +SK       + F ++ ++ + +E+ PV +++  ++ 
Sbjct: 1321 LSIKAVDNGRPQKWSTTRLHIEWISKPKPPPEPISFEESFFTFTVMESDPVAHMIGVISV 1380

Query: 70   NKPRDLRVKYWL---SNDYGERFSISR-QGDISLMQCLDYETEDSYRFTVYATDTLMTTS 125
              P       W      +Y  RF + +  G I + + LD E   +Y  TV ATD   T  
Sbjct: 1381 EPPS---TPLWFDITGGNYDSRFDVDKGTGTIIVAKPLDAEQRSNYNLTVEATDGTNTIH 1437

Query: 126  ATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR 184
              V I V++ ND  P+F   +YE+ +P     D  P + I ++ A D D+ +++  +L+
Sbjct: 1438 TQVFIKVIDTNDHRPQFSTSKYEVVIPE----DTAPETEILQISAVDKDEKNKLIYTLQ 1492



 Score = 58.9 bits (141), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 65/225 (28%), Positives = 108/225 (48%), Gaps = 19/225 (8%)

Query: 13   LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKP 72
            LVV+A   D   R+  A ++++    +    +FS + Y+++  EN     +L  V    P
Sbjct: 3093 LVVKAT--DGGGRFCQANIVLTLDDVNDNAPEFSADPYTMTVFENTEPGTLLTRVQATDP 3150

Query: 73   R---DLRVKYWLSNDYGERFSISRQ-GDISLMQCLDYETEDSYRFTVYATDT----LMTT 124
                + ++ Y L +    +FSIS   G I L + LD E +  Y  T+ ATD      +T 
Sbjct: 3151 DAGLNRKIVYSLPDSADGQFSISESSGIIQLEKPLDRELQAVYTLTLKATDQGLPRRLTA 3210

Query: 125  SATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAA--DGDKGDRVTLS 182
            ++TV +SV+++ND  P F Y +Y   +      D   G+ + +V AA  D +    +T S
Sbjct: 3211 TSTVVVSVLDINDNPPVFEYREYSASVSE----DTLIGTEVLQVYAASRDIEANAEITYS 3266

Query: 183  -LRGPYEKMFSIN-DSGHISIVD-LSALNTSTIQLVVVATDTGNP 224
             + G     FSI+  +G I +++ L   ++    L V ATD G P
Sbjct: 3267 IISGNEHGKFSIDPRTGAIFLIESLDYESSHEYYLTVEATDGGTP 3311



 Score = 57.8 bits (138), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 62/201 (30%), Positives = 97/201 (48%), Gaps = 23/201 (11%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSN-DYGERFSIS-RQGDISLMQC 102
            F K  YS    EN+ V+  ++ +  N P  L+V Y +++ D   +F+I+   G I+++  
Sbjct: 2180 FEKPFYSAEIPENIQVHSPVVHIQANSPEGLKVFYSITDGDPFSQFTINFNTGVINVIAP 2239

Query: 103  LDYETEDSYRFTVYATDTLMTTSATVNISVV--NVNDWDPRFRYPQYELFLPHIPLADLT 160
            LD+E+  +Y+ +V ATD+L    A V + +V  +VND  P F    Y         A L+
Sbjct: 2240 LDFESHPAYKLSVRATDSLTGAHAEVFVDIVVEDVNDNPPVFVQQSY--------AATLS 2291

Query: 161  PGSVIG----KVEAADGDK--GDRVTLSLRGPYEK---MFSINDS-GHISIVD-LSALNT 209
              SVIG    +V A D D      V+  + G + K    F ++ S G IS+V  L     
Sbjct: 2292 EASVIGTSVVQVRATDSDSEPNRGVSYHMFGNHSKSYDHFHVDSSTGLISLVRTLDYEQV 2351

Query: 210  STIQLVVVATDTGNPPRQASV 230
               ++ V A D G PP  + V
Sbjct: 2352 HQHKIFVRAIDGGMPPLSSDV 2372



 Score = 57.8 bits (138), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 61/217 (28%), Positives = 104/217 (47%), Gaps = 18/217 (8%)

Query: 29   ATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTV-TTNKPRDL--RVKYWLSNDY 85
            A + V+  G +L    F +NEY V   EN P++ +++ V  T+    +   + Y + ND+
Sbjct: 2474 AQVHVTVIGGNLHSPVFPQNEYEVELAENAPLHTLVVEVPATDGDSGVYGDITYHIVNDF 2533

Query: 86   G-ERFSISRQGDISLMQCLDYE--TEDSYRFTVYATDTLMTTS-ATVNISVVNVNDWDPR 141
              +RF  + +G I  ++ LD E   E      + A D     +  T+N+ + + ND  P+
Sbjct: 2534 AKDRFYTNERGQIFTLEKLDREIPAEKVIAVRLMAKDAGGKVAFCTINVILTDDNDNAPQ 2593

Query: 142  FRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDR--VTLSLRGPYEKM---FSIND- 195
            FR  +YE+ +     ++   G+ + KV A+D D+G    VT ++    E +     IN  
Sbjct: 2594 FRATKYEVNIG----SNAPKGTSVIKVLASDADEGSNADVTYAIEADSESVKENLEINKL 2649

Query: 196  SGHISIVD-LSALNTSTIQLVVVATDTGNPPRQASVP 231
            SG I+  + L  L        V A D G+PP+ + VP
Sbjct: 2650 SGIITTKESLIGLEDEVFTFFVRAVDHGSPPKASVVP 2686



 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 64/215 (29%), Positives = 102/215 (47%), Gaps = 21/215 (9%)

Query: 27   ALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLS---- 82
            A +T++VS    +     F   EYS S  E+  +   +L V     RD+     ++    
Sbjct: 3210 ATSTVVVSVLDINDNPPVFEYREYSASVSEDTLIGTEVLQVYAAS-RDIEANAEITYSII 3268

Query: 83   --NDYGERFSIS-RQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVN 136
              N++G +FSI  R G I L++ LDYE+   Y  TV ATD     ++  ATVN++V ++N
Sbjct: 3269 SGNEHG-KFSIDPRTGAIFLIESLDYESSHEYYLTVEATDGGTPSLSDVATVNVNVTDIN 3327

Query: 137  DWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS-LRGPYEKMFSIND 195
            D  P F    Y   +    + +    +V+   + ADG     +  S + G     F+I+ 
Sbjct: 3328 DNTPVFSQDPYTAVISEDAVLEQPVITVMA--DDADGPLNSHIHYSIIDGNQGSPFTIDP 3385

Query: 196  S-GHISIVDLSALNTSTIQ---LVVVATDTGNPPR 226
            + G + +  L  L+  TI    L V A+D G+PPR
Sbjct: 3386 ARGEVKVTKL--LDRETISGYTLTVQASDNGSPPR 3418



 Score = 51.2 bits (121), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 61/195 (31%), Positives = 90/195 (46%), Gaps = 20/195 (10%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTTNKPRDL----RVKYWLSNDYGERFSI-SRQGDIS 98
            +F +  Y V   E+  VN  ++ V     RDL    +V Y L  D  + FSI S  G ++
Sbjct: 819  EFFQESYFVEVSEDKEVNSEIIQVEATD-RDLGPNGQVTYSLLTD-TDTFSIDSVTGVVT 876

Query: 99   LMQCLDYETEDSYRFTVYATDTL-----MTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
            +++ LD E +  +   V A D       + ++  + +SV +VND  PRF  P Y + +  
Sbjct: 877  VVRPLDPEVQHVHYLKVEARDQATEEPQLFSTVLLKVSVEDVNDNPPRFIPPNYRVKV-- 934

Query: 154  IPLADLTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSIND-SGHISIV-DLSALNT 209
                DL  G++I  +EA D D G   +V  SL  P E  F ++  SG + IV  L     
Sbjct: 935  --REDLPEGTIIMWLEAYDPDLGQSSQVRYSLLDPGEGNFDVDKLSGAVRIVQQLDFEKK 992

Query: 210  STIQLVVVATDTGNP 224
                L V A D G P
Sbjct: 993  QVYNLTVRAKDKGKP 1007



 Score = 48.1 bits (113), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 56/237 (23%), Positives = 99/237 (41%), Gaps = 37/237 (15%)

Query: 11   ITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTN 70
             T  VRA+ + +  + ++  + V       +  +FS+  Y+ +  E++P+   +  +   
Sbjct: 2667 FTFFVRAVDHGSPPKASVVPVYVKILPPETQLPKFSEPFYTYTVSEDMPIGTEIDVIRAE 2726

Query: 71   KPRDLRVKYWLSN----DYGERFSISRQ-GDISLMQCLDYETEDSYRFTVYA----TDTL 121
                +       N    +  E F I RQ G + L + LD+ET   Y+F++ A     D  
Sbjct: 2727 HGGPVLYSLVRGNTPESNRDEFFVIDRQSGKLKLEKALDHETTKWYQFSILARCTPEDDE 2786

Query: 122  MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTL 181
            +  S  V+I V + ND  P      YE F+    + +   GS + +V A+D D G    +
Sbjct: 2787 VVASVDVSIQVKDANDNSPVLESNPYEAFI----VENQPGGSRVIQVRASDLDSGTNGQV 2842

Query: 182  SLRGPYEKMFSINDSGHISIVDLSALNTST----------------IQLVVVATDTG 222
                    M+S++ S  + I +  A+N  T                 Q+ VVA+D G
Sbjct: 2843 --------MYSLDPSQSVDITESFAINMETGWITTLKELDHEKRDNYQIKVVASDHG 2891



 Score = 45.1 bits (105), Expect = 0.060,   Method: Compositional matrix adjust.
 Identities = 53/191 (27%), Positives = 87/191 (45%), Gaps = 30/191 (15%)

Query: 56   ENLPVNYVLLTVTTNKP---RDLRVKYWLSNDYG-ERFSISRQ-GDISLMQCLDYETEDS 110
            E++P+   ++TV+ +     RD  ++Y + +  G   F I  + G I     LD E+   
Sbjct: 1043 EDVPIGSSVMTVSAHDEDTGRDGEIRYSIRDGSGVGVFKIDEETGVIETSDRLDRESAPH 1102

Query: 111  YRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSV-IG 166
            Y  TVYATD     +++   + + V +VND  PR   P   ++ P +   + +P  V + 
Sbjct: 1103 YWLTVYATDQGVVPLSSFVEIYVEVEDVNDNAPRTSEP---VYYPEV--MENSPKDVSVV 1157

Query: 167  KVEAADGDKGDRVTLSLRGPYEKMFSINDSGHISIVDLSALNTSTIQ-----------LV 215
            +++A D D      L+      K+ S N  G  SI   + L T+T +           L 
Sbjct: 1158 QIDALDPDSSSSDKLTY-----KITSGNPQGFFSIHPRTGLITTTSRRLDREQQDEHILE 1212

Query: 216  VVATDTGNPPR 226
            V  TD G+PPR
Sbjct: 1213 VTVTDNGSPPR 1223



 Score = 43.1 bits (100), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 41/161 (25%), Positives = 72/161 (44%), Gaps = 12/161 (7%)

Query: 45   FSKNEYSVSALENLPVNYVLLT--VTTNKPRDLRVKYWLSNDYG---ERFSISRQGDISL 99
            FS+  YSV   EN PV + +L   VT          ++ + + G     F ++++G +  
Sbjct: 3438 FSRENYSVIIQENKPVGFSVLQLLVTDRDSSHNGPPFFFTIESGNDDSAFEVNQRGVLLT 3497

Query: 100  MQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
               +D   +D Y   V   D     +++   V+I V+  + + P       E+F+     
Sbjct: 3498 SAAMDRRVKDHYLLRVKVADNGKPQLSSLTYVDIRVIEESIYPPAIL--PLEIFI--TAF 3553

Query: 157  ADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSG 197
             +   G VIGK+ A D D  D +T SL    + +FS++ +G
Sbjct: 3554 GEEYSGGVIGKIHATDQDVYDTLTYSLDPQMDSLFSVSSTG 3594



 Score = 38.5 bits (88), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 54/215 (25%), Positives = 87/215 (40%), Gaps = 19/215 (8%)

Query: 24  DRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLR---VKYW 80
           DR A   ++V     +    +F++  Y  S  EN+P+   +++V+   P +     V Y 
Sbjct: 440 DRKASTRVLVKVLSANSNAPEFTQTAYKASFDENVPIGTTVMSVSAADPDEGENGYVTYS 499

Query: 81  LSNDYGERFSISR-QGDISLMQCLDYE-TEDSYRFTVYATDTLMTTSATVNI----SVVN 134
           ++N     F I    G +     LDYE     Y   + A+D  +     V +    ++ N
Sbjct: 500 IANLNPVPFVIDHFTGAVRTSAVLDYELMPRVYTLRIRASDWGLPYRREVEVLATLTLNN 559

Query: 135 VNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYE-KMFSI 193
           +ND  P F     E  +P     DL  G  I  V A D D+   V   +    E  +FS+
Sbjct: 560 LNDNRPLFEKINCEGTIPR----DLGVGEQITTVSAIDADELQLVRYQIEAGNELDLFSL 615

Query: 194 NDSGHI-----SIVDLSALNTSTIQLVVVATDTGN 223
           + S  +     S++D      S   L + ATD  N
Sbjct: 616 HPSSGVLSLKQSLMDGLGAKVSFHSLRITATDGEN 650



 Score = 38.5 bits (88), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 57/127 (44%), Gaps = 19/127 (14%)

Query: 45   FSKNEYSVSALENLPVNYVLLT--------VTTNKPRD---LRVKYWLSNDYGERFSI-S 92
            F++ EY+    E+  +N V+LT          T+  R+   L V + +     + F+I S
Sbjct: 1763 FTQAEYTGRISESASINSVVLTDKNVPLVIRATDADRESNALLVYHIVEPSVHKYFAIDS 1822

Query: 93   RQGDISLMQCLDYETEDSYRFTVYATDT-----LMTTSATVNISVVNVNDWDPRFRYPQY 147
              G I  +  LDYE   ++ FTV   D          +A V I V+++ND  P F    Y
Sbjct: 1823 STGAIHTVLSLDYEETSTFHFTVQVHDMGTPRLFAKYAANVTIHVIDINDCPPVFSKSLY 1882

Query: 148  E--LFLP 152
            E  L LP
Sbjct: 1883 EASLLLP 1889



 Score = 38.5 bits (88), Expect = 6.3,   Method: Compositional matrix adjust.
 Identities = 32/115 (27%), Positives = 55/115 (47%), Gaps = 8/115 (6%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNK---PRDLRVKY-WLSNDYGERFSIS-RQGDISL 99
            FS++ Y+    E+  +   ++TV  +    P +  + Y  +  + G  F+I   +G++ +
Sbjct: 3333 FSQDPYTAVISEDAVLEQPVITVMADDADGPLNSHIHYSIIDGNQGSPFTIDPARGEVKV 3392

Query: 100  MQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFL 151
             + LD ET   Y  TV A+D        + TVNI V +VND  P F    Y + +
Sbjct: 3393 TKLLDRETISGYTLTVQASDNGSPPRANTTTVNIDVSDVNDNAPVFSRENYSVII 3447


>gi|403285668|ref|XP_003934135.1| PREDICTED: protocadherin Fat 2 [Saimiri boliviensis boliviensis]
          Length = 4369

 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 53/193 (27%), Positives = 87/193 (45%), Gaps = 21/193 (10%)

Query: 43   LQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGER---FSISRQ-GDIS 98
            L F +  YS + +E  PVN+++  ++      L   +W +   G++   F I +  G I 
Sbjct: 1367 LAFDETHYSFTVMETDPVNHMVGVISVEGRPGL---FWFNISGGDKDTDFDIEKTTGSII 1423

Query: 99   LMQCLDYETEDSYRFTVYATDTLMTTSATVNISVV-NVNDWDPRFRYPQYELFLPHIPLA 157
            + + LD     SY  TV  TD   T +  V I ++ N+N   P+F    YE+ +P     
Sbjct: 1424 IARPLDTRRRSSYNLTVEVTDGSHTIATQVRIFMIANINHHRPQFLETHYEVRVPQ---- 1479

Query: 158  DLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSGHISIVDLSALNTSTIQLVVV 217
            D  PG  + +V+A D DKG  +  ++ G         D G  S+  L    +S + + V 
Sbjct: 1480 DTLPGVELLRVQATDQDKGKGLIYTIHGS-------QDPGSASLFQLDP--SSGVLVTVG 1530

Query: 218  ATDTGNPPRQASV 230
              D G  P Q ++
Sbjct: 1531 KLDLGLGPSQHTL 1543



 Score = 55.8 bits (133), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 45/142 (31%), Positives = 69/142 (48%), Gaps = 16/142 (11%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYG----ERFSI-SRQGD 96
            F  + Y     EN+PV   ++ VT    +  RD +V Y LS D G    E F+I S  G 
Sbjct: 2817 FEADPYKAVLTENMPVGTSVIQVTAIDKDTGRDGQVSYRLSADPGSNIHELFAIDSESGW 2876

Query: 97   ISLMQCLDYETEDSYRFTVYATDT----LMTTSATVNISVVNVNDWDPRFRYPQYELFLP 152
            I+ +Q LD ET  +Y F V A D      +++ A V +S+ + ND  PRF   +Y   + 
Sbjct: 2877 ITTLQELDCETCQTYNFHVVAYDQGQTIQLSSQALVQVSITDENDNAPRFASEEYRGSV- 2935

Query: 153  HIPLADLTPGSVIGKVEAADGD 174
               + +  PG ++  ++  D D
Sbjct: 2936 ---IENSEPGELVATLKILDAD 2954



 Score = 55.1 bits (131), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 60/199 (30%), Positives = 83/199 (41%), Gaps = 16/199 (8%)

Query: 44   QFSKNEYSVSALEN-----LPVNYVLLTVTTNKPRDLRVKYWLSNDYGERFSISRQGD-- 96
            +F+  EY  S +EN     L     +L    ++       Y    D   +F IS+ GD  
Sbjct: 2925 RFASEEYRGSVIENSEPGELVATLKILDADISEQNRQVTCYITEGDPLGQFGISQVGDEW 2984

Query: 97   -ISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIP 155
             IS  + LD E    Y   V A+D     S TV I V++VND  P+      +L      
Sbjct: 2985 RISSRKTLDREHMAKYLLRVTASDGKFQASVTVEIFVLDVNDNSPQCS----QLLYTGKV 3040

Query: 156  LADLTPGSVIGKVEAA--DGDKGDRVTLSLRGPYEKMFSIN-DSGHI-SIVDLSALNTST 211
              D+ PG  I KV A   D D   ++T SL GP    F ++  +G + ++  L       
Sbjct: 3041 HEDVFPGHFILKVSATDLDADTNAQITYSLHGPGAHEFKLDPHTGELTTLTPLDRERKDV 3100

Query: 212  IQLVVVATDTGNPPRQASV 230
              LV  ATD G    QA V
Sbjct: 3101 FNLVAKATDGGGRSCQADV 3119



 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 64/260 (24%), Positives = 111/260 (42%), Gaps = 40/260 (15%)

Query: 11   ITLVVRAIQYDNQDRYALATLIVSKAGTSLREL---------------QFSKNEYSVSAL 55
            I  V  ++ ++   +Y L+     K+ +SL ++               +F ++ YS   L
Sbjct: 3292 ILYVNASLDFETSPKYFLSIECTRKSSSSLSDITTVVVNITDVNEHRPRFPQDPYSTRVL 3351

Query: 56   ENLPVNYVLLTVTT---NKPRDLRVKYWL--SNDYGERFSISRQGDISLMQCLDYETEDS 110
            EN  V  V+LTV+    + P +  + Y L   N  G      ++G++ + + LD+E   S
Sbjct: 3352 ENALVGDVILTVSAADEDGPLNSDITYSLVEGNQLGHFTIHPKKGELQVAKALDWEQASS 3411

Query: 111  YRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTP-GSVIG 166
            Y   + ATD+    +     V I V +VND  PRF    Y        + + +P GS + 
Sbjct: 3412 YSLKLRATDSGQPPLHEDTDVAIQVADVNDNPPRFFQLNYS-----TTVQENSPIGSKVL 3466

Query: 167  KVEAADGDKGD-------RVTLSLRGPYEKMFSINDSGHISIVD-LSALNTSTIQLVVVA 218
            ++  +D D  +       R+T   +G     F +   G +   + LS       QL + A
Sbjct: 3467 QLILSDPDSPENGPPYSFRIT---KGNDGSAFRVTPDGWLVTAESLSRRAQEWYQLQIQA 3523

Query: 219  TDTGNPPRQASVPAIMHFPE 238
            +D+G PP  +S    +H  E
Sbjct: 3524 SDSGIPPLSSSTSVRVHVTE 3543



 Score = 47.0 bits (110), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 66/229 (28%), Positives = 100/229 (43%), Gaps = 18/229 (7%)

Query: 10   PITLVVRAIQYDNQDRYA-LATLIVSKAGTSLRELQFSKNEYSVSALENLPVN-YVLLTV 67
            P+ L VRA         + L T+ VS  G       F   E+SV   E+ P    VL   
Sbjct: 3202 PLELTVRASDLGTPIPLSTLGTVTVSVVGLEDYLPVFLNTEHSVQVPEDAPPGTEVLQLA 3261

Query: 68   TTNKPRDLRVKYWL--SNDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYAT---DTL 121
            T  +P   +  Y +   N+ G RF + +R G + +   LD+ET   Y  ++  T    + 
Sbjct: 3262 TLTRPGAEKTGYRVVSGNEQG-RFRLDARTGILYVNASLDFETSPKYFLSIECTRKSSSS 3320

Query: 122  MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDK--GDRV 179
            ++   TV +++ +VN+  PRF    Y   +    L +   G VI  V AAD D      +
Sbjct: 3321 LSDITTVVVNITDVNEHRPRFPQDPYSTRV----LENALVGDVILTVSAADEDGPLNSDI 3376

Query: 180  TLSL-RGPYEKMFSIN-DSGHISIVD-LSALNTSTIQLVVVATDTGNPP 225
            T SL  G     F+I+   G + +   L     S+  L + ATD+G PP
Sbjct: 3377 TYSLVEGNQLGHFTIHPKKGELQVAKALDWEQASSYSLKLRATDSGQPP 3425



 Score = 45.8 bits (107), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 55/192 (28%), Positives = 84/192 (43%), Gaps = 15/192 (7%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGERFSIS--RQGDISLMQC 102
            F    Y V   EN+ +   +L      P  LR+ Y +  +       +  + G +++   
Sbjct: 2191 FQSPYYKVRVPENITLYTPILHTQARSPEGLRLIYNIVEEEPLMLFTTDFKTGVLTVTGP 2250

Query: 103  LDYETEDSYRFTVYATDTLMT--TSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLT 160
            LDYE++  + FTV ATDT +   + ATV + V +VND  P F    Y   +    L   T
Sbjct: 2251 LDYESKTKHVFTVRATDTALGSFSEATVEVLVEDVNDNPPTFSQLVYTTSISE-GLPAQT 2309

Query: 161  PGSVIGKVEAADGDKGDRVTLSLR-----GPYEKMFSINDS-GHISIV-DLSALNTSTIQ 213
            P   + ++ A+D D G    +S +         K F IN S G +S V +L         
Sbjct: 2310 P---VIQLLASDQDSGRNRDVSYQIVEDGSDVSKFFQINGSTGEMSTVQELDYEAQQRFH 2366

Query: 214  LVVVATDTGNPP 225
            + V A D G+PP
Sbjct: 2367 VKVRAMDKGDPP 2378



 Score = 45.1 bits (105), Expect = 0.054,   Method: Compositional matrix adjust.
 Identities = 45/154 (29%), Positives = 71/154 (46%), Gaps = 15/154 (9%)

Query: 51  SVSALENLPVNYVLLTVTTNKPR---DLRVKYWLSNDYGER-FSISRQ-GDISLMQCLDY 105
           S+  LEN PVN  L  +    P    + ++ Y +++   E  F I  + G +++   LDY
Sbjct: 721 SIDVLENAPVNTSLARLAATDPDAGFNGKLVYVIADGNEEGCFDIELETGLLTIAAPLDY 780

Query: 106 ETEDSYRFTVYATDTLMTTSATVNISVVNVNDWD---PRFRYPQYELFLPHIPLADLTPG 162
           ET + Y   V   D      ++  +  VNV DW+   PRF    Y+L +      D   G
Sbjct: 781 ETTNFYILNVTVYDLGTPQKSSWKLLTVNVKDWNDHAPRFPPGGYQLTISE----DTEVG 836

Query: 163 SVIGKVEAADGDKGD--RVTLSLRGPYEKMFSIN 194
           + + ++   D D  D  RV  +L  P EK FS++
Sbjct: 837 TTVAELTTKDADSEDNGRVRYTLLSPTEK-FSLH 869



 Score = 43.1 bits (100), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 37/112 (33%), Positives = 62/112 (55%), Gaps = 6/112 (5%)

Query: 122  MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG--DRV 179
            + +++ V + +++VND  P F +  + + LP   L+ ++PG V  ++ A+D D+G   RV
Sbjct: 1242 LKSTSRVVVGILDVNDNPPVFSHKLFNVRLPER-LSPVSPGPVY-RLVASDLDEGLNGRV 1299

Query: 180  TLSLRGPYEKMFSIND-SGHISIVDLSALNTSTIQLVVVATDTGNPPRQASV 230
            T S+    E+ FSI+  +G +S   +       I L + ATD G PP  ASV
Sbjct: 1300 TYSIEESDEEGFSIDPVTGVVSSSSIFTAGEYNI-LTIKATDNGQPPLSASV 1350



 Score = 42.7 bits (99), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 60/203 (29%), Positives = 92/203 (45%), Gaps = 26/203 (12%)

Query: 41   RELQFSKNEYSVSALENLPVNYVLLTVTT--NKPRDLRVKYWLSNDYGERFSISRQGDIS 98
            + LQF ++ YS +  ENL     L+ + T  N   D  + Y+L N   + F + +   + 
Sbjct: 1984 KSLQFDQDVYSATVKENLQDRKALVILGTQGNYLNDT-LSYFLLNGT-DMFQMVQSAGVL 2041

Query: 99   LMQ--CLDYETEDSYRFTVYATDTLM---TTSATVNISVVNVNDWDPRFRY-PQYELFLP 152
              +    D E +D++   V   D         A V +S+ +VND  P+F++ P Y +   
Sbjct: 2042 ETRGVVFDREQQDTHELAVEVRDNRTPQRVAQALVRVSIEDVNDNPPKFKHLPYYTI--- 2098

Query: 153  HIPLADLT-PGSVIGKVEAADGDKGDR--VTLSLRGPYEKMFSINDS-GHISI---VDLS 205
               + D T PG V+ +V A D D G    VT +    Y   F I+   G IS+    D  
Sbjct: 2099 ---IQDGTEPGDVLFQVSATDEDLGTNGVVTYTFAEDY-TYFRIDPYLGDISLRKPFDYQ 2154

Query: 206  ALNTSTIQLVVVATDTGNPPRQA 228
            ALN    +L V+A D G P  Q+
Sbjct: 2155 ALN--KYRLKVIARDGGTPSLQS 2175



 Score = 42.7 bits (99), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 38/133 (28%), Positives = 69/133 (51%), Gaps = 14/133 (10%)

Query: 95   GDISLMQCLDYETEDSYRFTVYATDT-----LMTTSATVNISVVNVNDWDPRFRYPQYEL 149
            G ++++  +DYE+  S++F VY  D           A V I+V +VND  PRF    YE+
Sbjct: 1840 GTLTIVSEMDYESRPSFKFCVYVHDQGSPILFAPRPAQVIINVRDVNDSPPRFSEQIYEV 1899

Query: 150  FLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSIND-SGHISIVDLSAL 207
             +    +  + PG  +  V A+D D    V  S++ G  ++  +I+  +G IS+++ + +
Sbjct: 1900 AI----VGPIHPGMELLMVRASDDDS--EVNYSIKTGNADEAVTIHPITGRISVLNPAFM 1953

Query: 208  NTSTIQLVVVATD 220
              S  +L + A+D
Sbjct: 1954 GLSR-KLTIRASD 1965



 Score = 40.0 bits (92), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 44/154 (28%), Positives = 71/154 (46%), Gaps = 13/154 (8%)

Query: 87   ERFSISRQGDISLMQCLDYE--TEDSYRFTVYATDTLMTTS-ATVNISVVNVNDWDPRFR 143
            E+FSI+  G I+ +Q LD E  TE      V A D     +  TV I + + ND  P+F+
Sbjct: 2547 EKFSINPNGQIATLQKLDRENSTERVIAIKVMARDGGGRVAFCTVKIILTDENDNPPQFK 2606

Query: 144  YPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKM----FSIND-SGH 198
               Y + +     ++++  S + +V A D D+G    ++     E +      IN  +G 
Sbjct: 2607 ASAYTVSI----QSNVSKDSPVIQVLAYDADEGQNADVTYSVNPEDLVKDVIEINPVTGV 2662

Query: 199  ISIVD-LSALNTSTIQLVVVATDTGNPPRQASVP 231
            + + D L  L   TI  ++ A D G P   + VP
Sbjct: 2663 VKVKDSLVGLENRTIDFIIKAQDGGPPHWNSQVP 2696



 Score = 38.5 bits (88), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 54/197 (27%), Positives = 88/197 (44%), Gaps = 23/197 (11%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTTNKPRD------LRVKYWLSNDYGERFSISRQ-GD 96
            +FS+  Y+  A E+LP    +  V      D      +R     SN  G  FS+    G 
Sbjct: 2710 KFSEPLYTFPASEDLPEGSEIGVVKAVAAHDPVIYSLVRGTTPESNKDG-VFSLDPDTGV 2768

Query: 97   ISLMQCLDYETEDSYRFTVYA---TDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
            I + + +D+E+   Y+  V A    +T + +  +VNI V++VND  P F    Y+  L  
Sbjct: 2769 IKVRKTMDHESTKLYQIDVMAHCLQNTDVVSLVSVNIQVIDVNDNRPVFEADPYKAVL-- 2826

Query: 154  IPLADLTPGSVIGKVEAADGDKGDRVTLSLR------GPYEKMFSIN-DSGHISIV-DLS 205
                ++  G+ + +V A D D G    +S R          ++F+I+ +SG I+ + +L 
Sbjct: 2827 --TENMPVGTSVIQVTAIDKDTGRDGQVSYRLSADPGSNIHELFAIDSESGWITTLQELD 2884

Query: 206  ALNTSTIQLVVVATDTG 222
                 T    VVA D G
Sbjct: 2885 CETCQTYNFHVVAYDQG 2901



 Score = 38.1 bits (87), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 52/185 (28%), Positives = 84/185 (45%), Gaps = 19/185 (10%)

Query: 56   ENLPVNYVLLTVTTNKPRDL----RVKYWLSNDYGERFSIS-RQGDISLMQCLDYETEDS 110
            E+LP   +L  +  + P DL     V+Y L +D    F +    G +SL + LD+E    
Sbjct: 936  EDLPPGTILTFLDASDP-DLGPAGEVRYVLVDDAHGTFRVDLMTGALSLERELDFERRAG 994

Query: 111  YRFTVYATDT----LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTP-GSVI 165
            Y  +++A+D        T   + + V++VN+       P +  F+    + + +P G+ +
Sbjct: 995  YNLSLWASDNGRPLARRTLCHLEVIVLDVNE---NLHPPHFASFVHQGQVQENSPSGTQV 1051

Query: 166  GKVEAADGDKG--DRVTLSLR-GPYEKMFSIN-DSGHI-SIVDLSALNTSTIQLVVVATD 220
              V A D D G    +   LR G     FSIN D+G I ++  L     S   L V+A D
Sbjct: 1052 MVVAAHDDDSGLDGELQYFLRAGTGLAAFSINQDTGMIQTLAPLDREFASYYWLTVLAVD 1111

Query: 221  TGNPP 225
             G+ P
Sbjct: 1112 RGSVP 1116



 Score = 37.7 bits (86), Expect = 9.0,   Method: Compositional matrix adjust.
 Identities = 36/113 (31%), Positives = 50/113 (44%), Gaps = 9/113 (7%)

Query: 128  VNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LR 184
            V I V N N   PRF   +YE  +P        PG+ + +V A D D+G    +    L+
Sbjct: 1561 VTIHVENGNLHPPRFTQLRYEASIPDT----TAPGTELLQVRAMDADRGANAEVRYSLLK 1616

Query: 185  GPYEKMFSIND-SGHISIVD-LSALNTSTIQLVVVATDTGNPPRQASVPAIMH 235
            G  E  F+IN   G I++   L   N +   L V A D G+P        I+H
Sbjct: 1617 GNGEGFFNINALLGIITLTQKLDWANHAPHTLTVKAEDQGSPQWHDLATVIIH 1669


>gi|395820727|ref|XP_003783712.1| PREDICTED: protocadherin-15 isoform 15 [Otolemur garnettii]
          Length = 1860

 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 65/264 (24%), Positives = 123/264 (46%), Gaps = 29/264 (10%)

Query: 6   DFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVL- 64
           DF Q   LV++A Q +     A A+L +     + +   F+K+ Y    LE+ PV   + 
Sbjct: 356 DFHQKFDLVIKAEQDNGHPLPAFASLHIEILDENNQSPYFTKSSYQGYILESAPVGATIS 415

Query: 65  --LTVTT-----------NKPRDLRVKYWLSNDYGERFSISRQG---DISLMQCLDYETE 108
             L +TT              +D  +  +L NDY   F++++ G    ++L+Q +D E +
Sbjct: 416 DSLNLTTPLRIVALDKDIEDTKDPELHLFL-NDYTSVFTVTQTGITRYLTLLQPVDREEQ 474

Query: 109 DSYRFTVYATDTLMTTSAT-VNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGK 167
            +Y F++ A D +  +    VNI V++ ND  P F    Y +++      D+ PG  + +
Sbjct: 475 QTYTFSITAFDGVQESEPVIVNIRVMDANDNTPTFPEISYNVYV----YTDMNPGDSVIQ 530

Query: 168 VEAADGDKGD--RVTLSLRGPYEKMFSIND-SGHISIV-DLSALNTSTIQLVVVATDTGN 223
           + A D D+G    +T  +    +  F IN  +G I++   +  +   T  L V A D   
Sbjct: 531 LTAVDADEGSNGEITYDILVGAQGDFIINRTTGLITVAPGVELIVGRTYALTVQAADNAP 590

Query: 224 PPRQASVPAIMHFPEAIVQQASSK 247
           P  +++   I+   +A+ ++++ +
Sbjct: 591 PAERST--GILTLGKALDRESTDR 612



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 70/233 (30%), Positives = 101/233 (43%), Gaps = 26/233 (11%)

Query: 13  LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKP 72
           LVV A       R++  TL +           F+ + Y+V   ENLP     L +   K 
Sbjct: 716 LVVVATDGAVHPRHSTLTLAIKVLDIDDNSPVFTNSTYTVVVEENLPAGTTFLRIEA-KD 774

Query: 73  RDL--RVKYWLSNDYGERFSISR--QGDISLMQCLDYET----EDSYRFTVYATD---TL 121
            DL   V Y + +   + F       G++SL++ LDYE     E +  F V A D   T+
Sbjct: 775 VDLGANVSYRIRSPEVKHFFALHPFTGELSLLRSLDYEAFPDQEATITFLVEAFDIYGTM 834

Query: 122 MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDK----GD 177
               ATV + V ++ND+ P F    Y+  +      D   G+ I  V A D D       
Sbjct: 835 PPGIATVTVIVKDMNDYPPVFSKRLYKGMV----APDAVKGTPITTVYAEDADPPGLPAS 890

Query: 178 RVTLSLRG---PY-EKMFSIN-DSGH-ISIVDLSALNTSTIQLVVVATDTGNP 224
           RV   +     PY   +F +  DSG  I+ V+L+   T+  +LVVVA D G P
Sbjct: 891 RVRYRVDDVLYPYPASIFDVEEDSGRVITRVNLNEEPTTIFKLVVVAFDDGEP 943



 Score = 43.9 bits (102), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 49/171 (28%), Positives = 80/171 (46%), Gaps = 17/171 (9%)

Query: 76  RVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDTLM---TTSATVNISV 132
           +V Y L N +   F I+  G I     L+ E  D Y   V ATD  +    ++ T+ I V
Sbjct: 680 QVYYSLGN-FNNLFRITSNGSIYTAVKLNREVRDYYELVVVATDGAVHPRHSTLTLAIKV 738

Query: 133 VNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEK-MF 191
           ++++D  P F    Y + +      +L  G+   ++EA D D G  V+  +R P  K  F
Sbjct: 739 LDIDDNSPVFTNSTYTVVVEE----NLPAGTTFLRIEAKDVDLGANVSYRIRSPEVKHFF 794

Query: 192 SIND-SGHISI---VDLSAL--NTSTIQLVVVATDTGN--PPRQASVPAIM 234
           +++  +G +S+   +D  A     +TI  +V A D     PP  A+V  I+
Sbjct: 795 ALHPFTGELSLLRSLDYEAFPDQEATITFLVEAFDIYGTMPPGIATVTVIV 845



 Score = 38.9 bits (89), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 40/140 (28%), Positives = 71/140 (50%), Gaps = 8/140 (5%)

Query: 95  GDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLP-H 153
           G ++L + LD E+ D Y   + A+D     ++T  ++VV  +        P ++ +LP +
Sbjct: 597 GILTLGKALDRESTDRYILIITASDGRPDGTSTATVNVVVTDVN---DNAPVFDPYLPRN 653

Query: 154 IPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDSGHI-SIVDLSALNTS 210
           + + +    + +G+V A D D G   +V  SL G +  +F I  +G I + V L+     
Sbjct: 654 LSVVEEEANAFVGQVRATDPDAGINGQVYYSL-GNFNNLFRITSNGSIYTAVKLNREVRD 712

Query: 211 TIQLVVVATDTGNPPRQASV 230
             +LVVVATD    PR +++
Sbjct: 713 YYELVVVATDGAVHPRHSTL 732


>gi|351696447|gb|EHA99365.1| Protocadherin gamma-A7 [Heterocephalus glaber]
          Length = 895

 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 72/274 (26%), Positives = 121/274 (44%), Gaps = 45/274 (16%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKP---RDLRVKYWLSNDYGERFSISR-------Q 94
           F ++ YSV   EN P    + +VT + P   ++ +V Y L  D  +   +S         
Sbjct: 522 FPQSSYSVYVPENNPRGASIFSVTAHDPDSEKNAQVTYSLGKDIIQEAPVSSYVSINSDS 581

Query: 95  GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFL 151
           G +  +Q  DYE   + +  V A D+    ++++ ++N+ V++ ND  P   YP     L
Sbjct: 582 GVLYAIQSFDYEQFQNLQLRVIARDSGDPPLSSNMSLNLFVLDQNDNAPEILYPT----L 637

Query: 152 P-----HIPLADLT--PGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-DSGHI- 199
           P      + LA  +  PG ++ KV A D D G    L+   LR     +FS+   +G + 
Sbjct: 638 PTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLTYRLLRASEPGLFSVGLHTGEVR 697

Query: 200 ---SIVDLSALNTSTIQLVVVATDTGNPPRQASVPAIM----HFPEAIVQQASSKLNSGT 252
              +++D   L  S   LVV   D G PP  A+V   +      P+ +    S ++ +  
Sbjct: 698 TARALLDRDTLKQS---LVVAVQDHGQPPLSATVTLTVAVADSIPDVLADLGSIRIPTDP 754

Query: 253 SST------VLIILGVVLIVLGFVIILLILYIHK 280
             +      V+ +  V  I L FVI+LL L + +
Sbjct: 755 EDSDLTLYLVVAVATVSCIFLVFVIVLLALRLRR 788



 Score = 41.2 bits (95), Expect = 0.81,   Method: Compositional matrix adjust.
 Identities = 75/327 (22%), Positives = 129/327 (39%), Gaps = 72/327 (22%)

Query: 1   DINEDDFLQPITLVVRAIQYDNQDRYALATL------IVSKAGTSLRELQFSKNEYSVS- 53
           +I++D  L+P+ L    ++  ++ R  L  L      +V+       EL        VS 
Sbjct: 117 NISKDLGLEPLELAEHGVRIVSKGRTQLFALNPGSGSLVTAGRIDREELCAQSARCLVSF 176

Query: 54  ------ALENLPVNYVLLTVTTNKPR----DLRVKYWLSNDYGERFSISRQGD------- 96
                  +   PV   ++ V  N PR    ++ VK   +   G RF ++  GD       
Sbjct: 177 NILMEDKMNLFPVEVEIMDVNDNAPRFLTEEITVKIMENTAPGMRFPLNEAGDSDVGTNS 236

Query: 97  ---------------------------ISLMQCLDYETEDSYRFTVYA---TDTLMTTSA 126
                                      + L Q LD E E  +   + A    D  ++ + 
Sbjct: 237 LQGYQLSPNRHFSLVVHSGNDRKKYPELVLEQVLDREEEMIHHLVLTAYDGGDPPLSGTT 296

Query: 127 TVNISVVNVNDWDPRFRYPQYELFLPH-IPLADLTPGSVIGKVEAADGDKG--DRVTLSL 183
            + ++VV+VND  P F  PQY++ +P  +P+     G+ +  + A D D+G    VT S 
Sbjct: 297 RIQVTVVDVNDHTPVFSLPQYQVTVPESVPI-----GTRLLTINAVDLDEGVNGEVTYSF 351

Query: 184 RGPYEKM---FSIND-SGHISIVD-LSALNTSTIQLVVVATDTGNPPRQASVPAIM---- 234
           R    K+   F +N  +G +S ++ L   ++S  ++ V A D      +A V  I+    
Sbjct: 352 RQITPKLLQIFHLNSLTGELSTLEGLDYEDSSFYEMEVQAQDGPGSLAKAKVLIIILDVN 411

Query: 235 -HFPEAIVQQASSKLNSGTSSTVLIIL 260
            + PE  V   S+ +   T    +I L
Sbjct: 412 DNAPEVTVTSVSNSIPEDTPPGTVIAL 438



 Score = 41.2 bits (95), Expect = 0.91,   Method: Compositional matrix adjust.
 Identities = 51/172 (29%), Positives = 73/172 (42%), Gaps = 25/172 (14%)

Query: 67  VTTNKPRDLRVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATD---TLMT 123
           VT   P +L  K   S D   R   ++         LD E    Y  T+ ATD     ++
Sbjct: 452 VTCTIPENLPFKLERSIDNYYRLITAKH--------LDREKCSVYNITLKATDWGTPSLS 503

Query: 124 TSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGD--KGDRVTL 181
           T   +++ V + ND  P F    Y +++P     +   G+ I  V A D D  K  +VT 
Sbjct: 504 TETYISMYVADTNDNPPIFPQSSYSVYVPE----NNPRGASIFSVTAHDPDSEKNAQVTY 559

Query: 182 SL------RGPYEKMFSIN-DSGHI-SIVDLSALNTSTIQLVVVATDTGNPP 225
           SL        P     SIN DSG + +I          +QL V+A D+G+PP
Sbjct: 560 SLGKDIIQEAPVSSYVSINSDSGVLYAIQSFDYEQFQNLQLRVIARDSGDPP 611



 Score = 40.0 bits (92), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 50/193 (25%), Positives = 78/193 (40%), Gaps = 17/193 (8%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGERFSI----SRQGDI 97
           FS  +Y V+  E++P+   LLT+     ++  +  V Y       +   I    S  G++
Sbjct: 312 FSLPQYQVTVPESVPIGTRLLTINAVDLDEGVNGEVTYSFRQITPKLLQIFHLNSLTGEL 371

Query: 98  SLMQCLDYETEDSYRFTVYATDTLMTTS-ATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
           S ++ LDYE    Y   V A D   + + A V I +++VND  P          +P    
Sbjct: 372 STLEGLDYEDSSFYEMEVQAQDGPGSLAKAKVLIIILDVNDNAPEVTVTSVSNSIPE--- 428

Query: 157 ADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDS-----GHISIVDLSALNTST 211
            D  PG+VI  +   D D G    ++   P    F +  S       I+   L     S 
Sbjct: 429 -DTPPGTVIALLYLQDKDSGKNGEVTCTIPENLPFKLERSIDNYYRLITAKHLDREKCSV 487

Query: 212 IQLVVVATDTGNP 224
             + + ATD G P
Sbjct: 488 YNITLKATDWGTP 500


>gi|326924388|ref|XP_003208410.1| PREDICTED: protocadherin-11 X-linked-like [Meleagris gallopavo]
          Length = 1010

 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 36/115 (31%), Positives = 61/115 (53%), Gaps = 8/115 (6%)

Query: 73  RDLRVKYWLSNDYGERFSISRQ-GDISLMQCLDYETEDSYRFTVYATDTLM---TTSATV 128
           R+  + Y L +D    F++ R+ G ++ ++ LD E +D Y FTV A D  M    T+ATV
Sbjct: 497 RNAEISYILGSDAPPIFNLDRRTGILTAVRKLDREKQDRYSFTVLAKDNGMPPLQTNATV 556

Query: 129 NISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSL 183
            +SV++ ND  P F + +Y  ++P     +L     +G +   D D G+   ++L
Sbjct: 557 TVSVLDQNDNSPAFTHNEYNFYVPE----NLPMYGTVGLITVTDADSGENAAVTL 607



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 70/252 (27%), Positives = 109/252 (43%), Gaps = 28/252 (11%)

Query: 11  ITLVVRAIQYDNQDRYAL---------------ATLIVSKAGTSLRELQFSKNEYSVSAL 55
           I   VR +  + QDRY+                AT+ VS    +     F+ NEY+    
Sbjct: 521 ILTAVRKLDREKQDRYSFTVLAKDNGMPPLQTNATVTVSVLDQNDNSPAFTHNEYNFYVP 580

Query: 56  ENLPV--NYVLLTVT-TNKPRDLRVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYR 112
           ENLP+     L+TVT  +   +  V   + N           G I      D E + SY 
Sbjct: 581 ENLPMYGTVGLITVTDADSGENAAVTLSILNGRDNFIIDPLTGVIRPNITFDREQQGSYT 640

Query: 113 FTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVE 169
           F V A D      +++A V I+VV+VND  P F  P        +P +  +PGSV+ KV 
Sbjct: 641 FQVKAVDGGRLQRSSTAKVTINVVDVNDNRPVFVIPSSNYSYELVPTSS-SPGSVVTKVF 699

Query: 170 AADGDKGDRVTLS---LRGPYEKMFSIND-SGHISIVDLSALNTSTI-QLVVVATDTGNP 224
           A D D G    L    + G    +F+I+  +G+I++ +    +   + +LV+   D G P
Sbjct: 700 AVDNDTGMNAELRYSIIGGNSRGLFAIDQLTGNITLKEKVITSDHGLHRLVIKVNDLGQP 759

Query: 225 PRQASVPAIMHF 236
               ++ A++H 
Sbjct: 760 ESLYTI-ALVHL 770



 Score = 42.4 bits (98), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 47/186 (25%), Positives = 76/186 (40%), Gaps = 16/186 (8%)

Query: 56  ENLPVNYVLLTVTT-NKPRDLRVKYWLSNDYGERFSISRQGD----ISLMQCLDYETEDS 110
           E  P+N  +  +T  +K  DL  K     D+   F +    D    +     LDYE+   
Sbjct: 372 EKAPLNTKIALITVMDKDADLNGKVTCFTDHDVPFRLKPVFDNQFLLETATFLDYESTRE 431

Query: 111 YRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGK 167
           Y   + A+D+    +  SA + I + + ND  P F  P   L +P     +  PG+ + K
Sbjct: 432 YAIKIVASDSGKPPLNQSAMLLIKIKDENDNAPVFTQPIIGLSIPE----NNAPGTQLTK 487

Query: 168 VEAADGDKGDRVTLS--LRGPYEKMFSINDSGHI--SIVDLSALNTSTIQLVVVATDTGN 223
           + A D D G    +S  L      +F+++    I  ++  L           V+A D G 
Sbjct: 488 ISATDADSGRNAEISYILGSDAPPIFNLDRRTGILTAVRKLDREKQDRYSFTVLAKDNGM 547

Query: 224 PPRQAS 229
           PP Q +
Sbjct: 548 PPLQTN 553


>gi|260837445|ref|XP_002613714.1| hypothetical protein BRAFLDRAFT_130689 [Branchiostoma floridae]
 gi|229299103|gb|EEN69723.1| hypothetical protein BRAFLDRAFT_130689 [Branchiostoma floridae]
          Length = 1875

 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 68/239 (28%), Positives = 114/239 (47%), Gaps = 27/239 (11%)

Query: 2   INEDDFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVN 61
           +N +D+ Q  ++VV+A Q  N  + A A L+++    +    +F + EY     EN    
Sbjct: 456 VNREDY-QTFSIVVKAEQDRNDPKPAYANLLITVLDLNDHTPEFDEREYVGFVGENSVAG 514

Query: 62  YVLLTVTTN-KPRDLR--------VKYWLSNDYGERFSISRQGDISLM---QCLDYETED 109
             ++T     +P ++R        V Y L N Y ++F +   GD+  +   Q LD E +D
Sbjct: 515 TTVVTREDGAEPLEIRAMDLDGTEVMYSLLN-YTDKFRLRPVGDVQYLIITQSLDREEQD 573

Query: 110 SYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL--ADLTPGSVIGK 167
           +Y  +V A+D  +T   TV ++VV+ ND+ P+F  P      P+I     D   G V+ +
Sbjct: 574 TYELSVMASDGELTNMTTVVVTVVDRNDFTPQFHPPG-----PYITRLKDDALAGHVVYE 628

Query: 168 VEAADGDKG--DRVTLSL---RGPYEKMFSIND-SGHISIVDLSALNTSTIQLVVVATD 220
           +   DGD G    VT S+       E  F++ + +G +++ D S L      L V+A D
Sbjct: 629 LNVTDGDGGAYGEVTFSILHVTNNGENKFAVQERNGTVTLEDESLLTGEVYTLTVMAAD 687



 Score = 43.9 bits (102), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 63/225 (28%), Positives = 98/225 (43%), Gaps = 20/225 (8%)

Query: 13   LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKP 72
            LVV A       R +  TL V+    +    QF ++ Y V   EN     +L    T+  
Sbjct: 1072 LVVTANDKAPDGRSSSVTLTVNVTDINDNSPQFPEDLYEVVLDENENATVLLTLQATDAD 1131

Query: 73   RDLRVKYWLSNDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNIS 131
             D  + Y +++     F+I S  G +S +Q LD+E +  Y   V A D     + TV ++
Sbjct: 1132 LDPSLTYSIADGDTSMFTIDSTTGQLSNLQPLDFEMDPEYTLVVQADDGQNQGNTTVIVA 1191

Query: 132  VVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGD-KGDRVTLSLRGPYE-- 188
            V ++N++ P F    Y   +    L +   G+++  V A D D KG   T S +  Y   
Sbjct: 1192 VNDMNEFAPVFSQNVYTAEV----LDNAVVGTIVTTVNATDNDVKG---TPSAQVLYRLA 1244

Query: 189  -------KMFSIND-SGHI-SIVDLSALNTSTIQLVVVATDTGNP 224
                    +F ++  SG + S V+L      T QL V A D G+P
Sbjct: 1245 DEDSMAAGLFRVDRVSGVVTSRVNLRESPGDTYQLAVEAYDGGDP 1289



 Score = 42.4 bits (98), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 36/116 (31%), Positives = 56/116 (48%), Gaps = 9/116 (7%)

Query: 89   FSISRQGDISLMQCLDYETEDSYRFTVYATDTL---MTTSATVNISVVNVNDWDPRFRYP 145
            F IS  G I   Q LD E +D Y   V A D      ++S T+ ++V ++ND  P+F   
Sbjct: 1048 FEISPVGAIYATQRLDREEQDQYVLVVTANDKAPDGRSSSVTLTVNVTDINDNSPQFPED 1107

Query: 146  QYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSIND-SGHIS 200
             YE+ L     A     +V+  ++A D D    +T S+      MF+I+  +G +S
Sbjct: 1108 LYEVVLDENENA-----TVLLTLQATDADLDPSLTYSIADGDTSMFTIDSTTGQLS 1158


>gi|62896915|dbj|BAD96398.1| protocadherin beta 7 precursor variant [Homo sapiens]
 gi|120660170|gb|AAI30334.1| Protocadherin beta 7 [Homo sapiens]
 gi|313883256|gb|ADR83114.1| protocadherin beta 7 [synthetic construct]
          Length = 793

 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 54/176 (30%), Positives = 80/176 (45%), Gaps = 27/176 (15%)

Query: 95  GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFL 151
           G +  ++ LDYE   ++ F V ATD     +++ A V + V++ ND  P   YP      
Sbjct: 511 GHLFALRSLDYEALQAFEFRVGATDRGSPALSSEALVRVLVLDANDNSPFVLYPLQNSSA 570

Query: 152 PH---IPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSI-NDSGHISIVD- 203
           P    +P A   PG ++ KV A DGD G    LS   L+     +F +   +G +     
Sbjct: 571 PCTEPLPRA-AEPGYLVTKVVAVDGDSGQNAWLSYQLLKATEPGLFGVWAHNGEVRTARL 629

Query: 204 LSALNTSTIQLVVVATDTGNPPRQASVPAIMH-------------FPEAIVQQASS 246
           LS  + +  +LVV+  D G PPR A+  A +H              PEA   QA+S
Sbjct: 630 LSERDAAKQRLVVLVKDNGEPPRSAT--ATLHVLLVDGFSQPYLRLPEAAPDQANS 683



 Score = 40.8 bits (94), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 44/137 (32%), Positives = 59/137 (43%), Gaps = 21/137 (15%)

Query: 103 LDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADL 159
           LD E    Y  T+  TD     + T   + + V +VND  P F    Y LF+      + 
Sbjct: 409 LDRERNTEYNITITVTDLGTPRLKTEHNITVLVSDVNDNAPAFTQTSYTLFVRE----NN 464

Query: 160 TPGSVIGKVEAADGDKGD--RVTLSL------RGPYEKMFSIN-DSGH---ISIVDLSAL 207
           +P   IG V A D D G   +V  SL        P   + SIN D+GH   +  +D  AL
Sbjct: 465 SPALPIGSVSATDRDSGTNAQVIYSLLPSQDPHLPLASLVSINADNGHLFALRSLDYEAL 524

Query: 208 NTSTIQLVVVATDTGNP 224
                +  V ATD G+P
Sbjct: 525 Q--AFEFRVGATDRGSP 539


>gi|340715254|ref|XP_003396132.1| PREDICTED: fat-like cadherin-related tumor suppressor homolog [Bombus
            terrestris]
          Length = 3597

 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 60/240 (25%), Positives = 114/240 (47%), Gaps = 31/240 (12%)

Query: 6    DFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLREL--------------QFSKNEYS 51
            DF   +  VV  + Y+ + +Y L             E+              +F+++ Y+
Sbjct: 1145 DFNTGVIYVVDELDYEQKKQYELTVRATDSVSGVYAEVLVSILVLDVNDCPPEFTQDSYN 1204

Query: 52   VSALENLPVNYVLLTVTT-NKPRDL--RVKYWLSND---YGERFSIS-RQGDISLMQCLD 104
            +S  E  P    +L V++ +   D+  +V+Y + ND     + F I   +G I L + LD
Sbjct: 1205 ISVSEAAPFGTSVLRVSSRDNDTDINQQVRYAIQNDTENSTDLFHIDPEEGVIFLKRSLD 1264

Query: 105  YETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTP 161
            +ET +S+ FTV A D     ++++A V ++V+++ND  P+F  P Y   L          
Sbjct: 1265 HETHESHHFTVIAIDRGVPSLSSTAHVWVTVIDMNDNPPKFEQPSYTCSLSE----HAER 1320

Query: 162  GSVIGKVEAADGDK-GDRVTLSLRGPYEKM-FSINDS-GHISIVDLSALNTSTIQLVVVA 218
            G  +  V A+D D   D++T ++ G  E+  ++I+ S G IS++++       + ++ V+
Sbjct: 1321 GQFVTVVSASDPDYVDDKLTYTIVGGNEQQTYNIDQSTGIISLINMQNFGEKKLSMLNVS 1380



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 64/263 (24%), Positives = 119/263 (45%), Gaps = 32/263 (12%)

Query: 9   QPITLVVRAI-----QYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNY- 62
           Q   +++RA      Q  +Q R ++  + V K   S     F  N  +V   E+  V + 
Sbjct: 229 QEYEMMIRAADSGEPQRSHQTRVSVQVVEVPKE--SENPPVFKTNNQTVEVTESDEVGFL 286

Query: 63  VLLTVTTNKPRDLRVKYWLSNDYGERFSISR-QGDISLMQCLDYETEDSYRFTVYATDTL 121
           V L    +K  D      +  D  + F I R  G++ L + LD+ET++ Y  T+  TD++
Sbjct: 287 VALVQAADKDGDSLWYDIVDGDKRDEFFIGRDNGNVLLAKKLDWETQNFYNLTIRVTDSV 346

Query: 122 MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLAD-LTPGSVIGKVEAADGDKGDRVT 180
            T    + ++V+++ND  P F    Y     H+ +++ +  G  I ++ A D D+  +V 
Sbjct: 347 HTAETQLLVTVIDINDHRPEFTENIY-----HVDISENVEKGEKILQLHATDEDEDKKVF 401

Query: 181 LSLRGPYEK----MFSIND-SGHISIVDLSALNTSTIQ---LVVVATDTGNPPRQASVPA 232
            SL     +    +F ++  +G +++ ++  L+  TI+   L V+  D G P ++     
Sbjct: 402 YSLHAAQNQASLEIFHVDSVTGAVTLNEV--LDRETIEEHVLTVMVKDQGTPAKRNYARV 459

Query: 233 IM-------HFPEAIVQQASSKL 248
           I+       H PE I +    K+
Sbjct: 460 IITVHDHNDHAPEFISEIIQGKV 482



 Score = 48.9 bits (115), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 36/125 (28%), Positives = 64/125 (51%), Gaps = 12/125 (9%)

Query: 59   PVNYVLLTVTTN---KPRDLRVKYWLSNDYGERFSISRQ-GDISLMQCLDYETEDSYRFT 114
            P  YVL  + T+   +P + +++++L+ D  ++FS+ ++ G +  +  LD ET+  Y  T
Sbjct: 1941 PGTYVLTVLATDYDDEP-NAKLRFYLTGDNNDKFSLDKETGVLKTVGQLDRETQAKYSLT 1999

Query: 115  VYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAA 171
             +  D        S+ + I V ++ND  P+F    Y   LP     D+  G+++ KV A 
Sbjct: 2000 AHVQDRDKPSWECSSQLEILVSDLNDNAPKFTMQTYSATLPE----DVEVGTLVTKVHAT 2055

Query: 172  DGDKG 176
            D D G
Sbjct: 2056 DNDIG 2060



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 52/194 (26%), Positives = 83/194 (42%), Gaps = 24/194 (12%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTTNKPRDL----RVKYWLSNDYGERFSI----SRQG 95
            +F  N Y +S  EN+     +L +  +   DL     V+Y   +D GE  ++    +  G
Sbjct: 1717 KFESNPYGISLAENIEEGTSILKIIAHD-EDLGSNGEVRYSFGSDIGELANVFTVDTYTG 1775

Query: 96   DISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLP 152
             IS +  LD E +  Y+F V ATD          +V++ + + ND  P F   +YE  + 
Sbjct: 1776 WISTLVLLDKEKQPEYKFQVVATDNGNPKHFARTSVHVKLKDYNDNPPAFVDDRYEAAVN 1835

Query: 153  HIPLADLTPGSVIGKVEAADGDKGDRVTLSL---RGPYEKMFSINDSGHISIVDLSALNT 209
                 D  PG+V+ K+   D D      +      G     F I  +G + +    AL+ 
Sbjct: 1836 E----DALPGTVVVKLITMDKDSDVNTPIEFYITSGDSRSQFQIRSTGEVYVA--KALDR 1889

Query: 210  STI---QLVVVATD 220
             TI   +L +V TD
Sbjct: 1890 ETIDRYELEIVGTD 1903



 Score = 47.8 bits (112), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 42/137 (30%), Positives = 73/137 (53%), Gaps = 13/137 (9%)

Query: 45   FSKNEYSVSALENLPVNYVL-LTVTTNKPRDLRVKYWLS--NDYGERFSIS-RQGDISLM 100
            F K  Y+ S LE++ ++  L L++    P + ++ Y ++  ND+ E F++    G I ++
Sbjct: 1096 FDKQFYTDSVLESIEIHSPLSLSIQAESPLNRKLIYSITKGNDF-EEFALDFNTGVIYVV 1154

Query: 101  QCLDYETEDSYRFTVYATDTLMTTSATVNIS--VVNVNDWDPRFRYPQYELFLPHIPLAD 158
              LDYE +  Y  TV ATD++    A V +S  V++VND  P F    Y     +I +++
Sbjct: 1155 DELDYEQKKQYELTVRATDSVSGVYAEVLVSILVLDVNDCPPEFTQDSY-----NISVSE 1209

Query: 159  LTP-GSVIGKVEAADGD 174
              P G+ + +V + D D
Sbjct: 1210 AAPFGTSVLRVSSRDND 1226



 Score = 47.4 bits (111), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 66/245 (26%), Positives = 113/245 (46%), Gaps = 30/245 (12%)

Query: 13  LVVRAIQYDNQDRYALATLIVSKAGTSLREL------------QFSKNEYSVSALENLPV 60
           L+ + + ++ Q+ Y L   +     T+  +L            +F++N Y V   EN+  
Sbjct: 323 LLAKKLDWETQNFYNLTIRVTDSVHTAETQLLVTVIDINDHRPEFTENIYHVDISENVEK 382

Query: 61  NYVLLTV-TTNKPRDLRVKYWLSNDYG----ERFSI-SRQGDISLMQCLDYETEDSYRFT 114
              +L +  T++  D +V Y L         E F + S  G ++L + LD ET + +  T
Sbjct: 383 GEKILQLHATDEDEDKKVFYSLHAAQNQASLEIFHVDSVTGAVTLNEVLDRETIEEHVLT 442

Query: 115 VYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTP-GSVIGKVEAADG 173
           V   D    T A  N + V +   D     P++   +    + + +P G+ + +V A D 
Sbjct: 443 VMVKD--QGTPAKRNYARVIITVHDHNDHAPEFISEIIQGKVYETSPIGAAVVQVYAIDR 500

Query: 174 DKGD--RVTLSL-RGPYEKMFSIN-DSGHISI---VDLSALNTSTIQLVVVATDTGNPPR 226
           D+GD  ++T S+  G    MF+I+ D G I +   +DLS   +S   L+V ATD G+P  
Sbjct: 501 DRGDNAKITYSITSGNVGNMFAIDPDLGVIRVARELDLSV--SSEYILLVKATDHGSPAL 558

Query: 227 QASVP 231
             +VP
Sbjct: 559 SNTVP 563



 Score = 45.4 bits (106), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 45/147 (30%), Positives = 70/147 (47%), Gaps = 13/147 (8%)

Query: 87   ERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDTL---MTTSATVNISVVNVNDWDPRF 142
            ++F I +R G I++ + LD+E    Y  T+ A D     ++  ATVNI+V++ ND  P F
Sbjct: 2180 KKFQIDARSGVITIAEQLDFERARDYFLTIQAIDGGIPPLSNHATVNITVIDSNDNAPIF 2239

Query: 143  RYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSL---RGPYEKMFSIND-SGH 198
                Y   +      D   G  + +V A D D  +   +S    RG  +K FSI++ +G 
Sbjct: 2240 SEVSYRASI----REDAKIGEKVTQVFANDLDSEENGNVSYYIERGDRQKQFSIDEKTGQ 2295

Query: 199  ISIVD-LSALNTSTIQLVVVATDTGNP 224
            I++   L         L V A D+G P
Sbjct: 2296 ITVAAPLDREEIGNYVLEVHARDSGIP 2322



 Score = 45.1 bits (105), Expect = 0.064,   Method: Compositional matrix adjust.
 Identities = 31/107 (28%), Positives = 49/107 (45%), Gaps = 7/107 (6%)

Query: 45   FSKNEYSVSALEN-LPVNYVLLTVTTNKPRDLRVK---YWLSNDYGERFSISRQGDISLM 100
            F  + Y  +  E+ LP   V+  +T +K  D+      Y  S D   +F I   G++ + 
Sbjct: 1825 FVDDRYEAAVNEDALPGTVVVKLITMDKDSDVNTPIEFYITSGDSRSQFQIRSTGEVYVA 1884

Query: 101  QCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDP---RFRY 144
            + LD ET D Y   +  TD        V + +++VND  P   R+RY
Sbjct: 1885 KALDRETIDRYELEIVGTDGKYVFKTRVTVQILDVNDNPPYCLRYRY 1931



 Score = 43.9 bits (102), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 45/150 (30%), Positives = 72/150 (48%), Gaps = 14/150 (9%)

Query: 89   FSISRQGDISLMQCLDYETEDSYRFTVYA-TDTL--MTTSATVNISVVNVNDWDPRFRYP 145
            F I   G I+L++ LD E +D++   V A TD+   +T  A +++ V++ ND  P+F   
Sbjct: 1662 FMIDAHGQITLVKPLDRELKDNHLIGVLAETDSSPPLTALAEISLQVLDENDHAPKFESN 1721

Query: 146  QYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR-----GPYEKMFSIND-SGHI 199
             Y + L      ++  G+ I K+ A D D G    +        G    +F+++  +G I
Sbjct: 1722 PYGISLAE----NIEEGTSILKIIAHDEDLGSNGEVRYSFGSDIGELANVFTVDTYTGWI 1777

Query: 200  S-IVDLSALNTSTIQLVVVATDTGNPPRQA 228
            S +V L        +  VVATD GNP   A
Sbjct: 1778 STLVLLDKEKQPEYKFQVVATDNGNPKHFA 1807


>gi|431899687|gb|ELK07641.1| Protocadherin Fat 4 [Pteropus alecto]
          Length = 1782

 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 50/169 (29%), Positives = 87/169 (51%), Gaps = 14/169 (8%)

Query: 77   VKYWLSNDYGER-FSI-SRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNIS 131
            ++Y +     ER F+I S  G ++L+  LDYE   +Y   + A D+    + ++ T+NI 
Sbjct: 1245 IRYSVMKGNEERQFAIDSTSGQVTLIGKLDYEATAAYSLVIQAVDSGAISLNSTCTLNID 1304

Query: 132  VVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTL--SLRGPY-E 188
            +++ ND  P F  P+  LF+    L ++  G ++  V A D D GD   L  S+ G    
Sbjct: 1305 ILDENDNTPSF--PKSTLFVD--VLENMRIGELVSSVTATDSDSGDNADLHYSITGTNNH 1360

Query: 189  KMFSIN-DSGHISIVDLSALNTSTI-QLVVVATDTGNPPRQASVPAIMH 235
              FSI+ ++G I +       T ++ +L + A D G PPR +++  ++H
Sbjct: 1361 GTFSISPNTGSIFLAKKLDFETQSLYKLNITAKDQGRPPRSSTMSVVIH 1409



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 53/198 (26%), Positives = 99/198 (50%), Gaps = 12/198 (6%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRDLR--VKYWLS-NDYGERFSISR-QGDISLM 100
           FS+  YS    EN+ + Y + +V+ +   DL   + Y ++  D    F+ISR  G ++  
Sbjct: 793 FSQAAYSFVVFENVALGYHVGSVSAST-MDLNSNISYLITTGDQKGMFAISRVTGQLTTA 851

Query: 101 QCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLT 160
             +D E +  Y+  V A+   +T    VNI+V ++ND  P F      + +    + +  
Sbjct: 852 SMIDREEQSFYQLKVVASGGTVTGDTMVNITVKDLNDNSPHFLQAVESVNV----VENWQ 907

Query: 161 PGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIND-SGHISIVDLSALNTSTIQLVVV 217
            G  I + +A D D+G    V  SL+   + +F+IN+ +G IS++    ++  + Q+ ++
Sbjct: 908 AGHSIFQAKAVDPDEGVNGMVFYSLKQNPKNLFTINEKNGSISLLGPLDVHAGSYQMEIL 967

Query: 218 ATDTGNPPRQASVPAIMH 235
           A+D G P   +S+   +H
Sbjct: 968 ASDMGVPQLSSSLILTVH 985



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 56/198 (28%), Positives = 89/198 (44%), Gaps = 24/198 (12%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLS-NDYGERFSISRQGDISLM 100
            F +  Y V+  E+ PVN     V     +   +  + Y ++  + G+ F I   G + + 
Sbjct: 996  FDQLSYEVTLSESEPVNSRFFKVQAFDKDSGANGEIAYSIAEGNTGDAFGIFPDGQLYIK 1055

Query: 101  QCLDYETEDSYRFTVYATDTLMT-TSATVNISVV--NVNDWDPRFRYPQYELFLPHIPLA 157
              LD E +D Y   V A+D  +   SATVN++V+  +VND  P F    Y  +       
Sbjct: 1056 SELDRELQDRYVLLVVASDRAVEPLSATVNVTVILEDVNDNRPLFNSTNYTFYFEE---- 1111

Query: 158  DLTPGSVIGKVEAADGDKGD----RVTLSLRGPYEKMFSINDSGHIS---IVDLSAL--- 207
            +   GS +GKV A D D G     R +  +  P  ++ ++  SG I+    +D  +L   
Sbjct: 1112 EQKSGSFVGKVSAVDKDFGPNGEVRYSFEMVQPDFELHAV--SGEITNTHHLDRESLMRR 1169

Query: 208  -NTSTIQLVVVATDTGNP 224
              T+     V+ATD G P
Sbjct: 1170 RGTAVFSFTVIATDRGLP 1187



 Score = 42.4 bits (98), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 62/220 (28%), Positives = 91/220 (41%), Gaps = 32/220 (14%)

Query: 25  RYALATLIVSKAGTSLRELQFSKNE-YSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSN 83
           + + A L+V+    +  +  FS+ E Y VS +EN P    LL V             L +
Sbjct: 562 KVSYAQLVVTLLDVNDEKPVFSQPEGYHVSVVENAPAGTELLVVGATDGD-------LGD 614

Query: 84  DYGERFSISR-------------QGDISLMQCLDYETEDSYRFTVYATDTL---MTTSAT 127
           +   RFS+                G +S +  LD E +  Y   V A D      ++ A 
Sbjct: 615 NGTVRFSLQEAEIDQRSFRLDPVSGRLSTVSSLDREEQAFYSLLVLAADLGSPPQSSVAR 674

Query: 128 VNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRG 185
           VN+S++++ND  P F   QY   +      +   GS I  V A D D G    V  S+  
Sbjct: 675 VNVSLLDLNDNSPVFYPVQYFARIQE----NEPGGSYITTVSATDPDLGLNGTVKYSISA 730

Query: 186 PYEKMFSIN-DSGHISI-VDLSALNTSTIQLVVVATDTGN 223
                F ++  SG IS  + L     +  QL +VATD GN
Sbjct: 731 GDRSRFQVSAQSGVISTRMALDREEKTAYQLQIVATDGGN 770


>gi|327270421|ref|XP_003219988.1| PREDICTED: protocadherin gamma-B5-like [Anolis carolinensis]
          Length = 808

 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 66/276 (23%), Positives = 122/276 (44%), Gaps = 41/276 (14%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKP---RDLRVKYWLSNDYGERFSIS-------RQ 94
           F K  ++   LEN P    +  V  + P   R+ ++ Y   +   E   +S         
Sbjct: 454 FEKPSFTTYILENNPAGVSVFHVKASDPDLDRNAQITYSFLSTSIEDLPLSSYISINSET 513

Query: 95  GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFL 151
           G I   +  DYE    ++  V A D     +++SATV + +++ ND  P+  YP      
Sbjct: 514 GTIYSQRSFDYEQLREFQIEVRAQDGGSPPLSSSATVTVCILDRNDNSPQILYPS----- 568

Query: 152 PHIP----LADLTP-----GSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSI-NDSGH 198
             +P    + ++ P     G ++ KV A D D G    LS   L+     +F+I + +G 
Sbjct: 569 -QVPEGSSVFEMVPRSAESGYLVTKVVAVDADSGHNSWLSFHLLQATEPSLFTIGSHTGE 627

Query: 199 ISIVD-LSALNTSTIQLVVVATDTGNPPRQASVPAIMHFPEAIVQQASSKLNSGTSST-- 255
           I     L   +    +LVV+  D G+PP  A+V   + F E+  Q+A  ++NS  + +  
Sbjct: 628 IQTARTLLERDAVKQKLVVMVKDNGHPPLSATVTVNLVFAESF-QEALPEINSQPNDSES 686

Query: 256 -----VLIILGVVLIVLGFVIILLILYIHKNKHTKN 286
                  ++L + L+   F++ +++  + K + ++N
Sbjct: 687 PSDIQFYLVLALALVSFLFLVTVILTIMMKLRRSRN 722



 Score = 42.4 bits (98), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 53/232 (22%), Positives = 102/232 (43%), Gaps = 21/232 (9%)

Query: 9   QPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVT 68
           Q   +++ A+      +   AT++V+    +     FS+  Y  S  EN P+   +L V 
Sbjct: 208 QTYHMILTAMDGGESKKTGTATILVTVTDINDNTPVFSQASYKGSLKENSPIGMSILQVK 267

Query: 69  ---TNKPRDLRVKY---WLSNDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATD-T 120
              +++  +  + Y    + +   + F++ SR G I LM+ +D+E   +Y   + A+D  
Sbjct: 268 ASDSDEGSNADITYTIIKIQDSIQKIFNVDSRDGTIILMENIDFEDRQNYVMIMQASDGG 327

Query: 121 LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGD--R 178
            +     V I V++ ND  P          +P     D+ PG+VI  ++  D D G+   
Sbjct: 328 GLVAHCNVEIEVLDENDNPPDVILTSISSPVPE----DIEPGAVIALIKVHDKDSGENGE 383

Query: 179 VTLSLRG--PYEKMFSINDSGHISIVDLSALNTSTI---QLVVVATDTGNPP 225
           V   L+   P++ + S +D  +  ++  S+L+        + + A D G  P
Sbjct: 384 VNCHLQEFVPFQIVSSSDD--YFKLLTDSSLDRERFPGYNITITAMDKGTSP 433


>gi|156351338|ref|XP_001622466.1| predicted protein [Nematostella vectensis]
 gi|156209014|gb|EDO30366.1| predicted protein [Nematostella vectensis]
          Length = 341

 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 57/213 (26%), Positives = 97/213 (45%), Gaps = 24/213 (11%)

Query: 30  TLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGERF 89
           T+I+     S    +F ++ Y     EN P+           P   RV Y L      +F
Sbjct: 46  TVIIEVTDISDMPPRFLQSSYLKEIEENTPI-----------PVFRRVLYHLVGADSVKF 94

Query: 90  SIS-RQGDISLMQCLDYETEDSYRFTVYATDT----LMTTSATVNISVVNVNDWDPRFRY 144
           +I    G + + + LDYE + ++ F V AT+T      + +A+V ++++N+ND  P F  
Sbjct: 95  AIDPTSGTLYINKTLDYEKQINFTFDVVATETDTSEKFSANASVTLTLININDNKPMFAK 154

Query: 145 PQYELFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIN-DSGHISI 201
             Y   +      ++TPG+ I  + A D D G    +T  LRG     FS+N D+G IS 
Sbjct: 155 SSYNYTMDE----EITPGTHIADITATDADLGTFGALTYELRGGQAAYFSVNADNGTISA 210

Query: 202 VDLSALNT-STIQLVVVATDTGNPPRQASVPAI 233
             +   +T    Q  ++A D G   ++ ++  +
Sbjct: 211 AQILDYDTLPQYQFSLMAKDGGGFYQEIAIATV 243



 Score = 43.1 bits (100), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 47/178 (26%), Positives = 83/178 (46%), Gaps = 17/178 (9%)

Query: 11  ITLVVRAIQYDNQDRY-ALATLIVSKAGTSLRELQFSKNEYSVSALENL-PVNYVLLTVT 68
            T  V A + D  +++ A A++ ++    +  +  F+K+ Y+ +  E + P  ++     
Sbjct: 117 FTFDVVATETDTSEKFSANASVTLTLININDNKPMFAKSSYNYTMDEEITPGTHIADITA 176

Query: 69  TNKPRDL----RVKYWLSNDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDT--- 120
           T+   DL     + Y L       FS+ +  G IS  Q LDY+T   Y+F++ A D    
Sbjct: 177 TDA--DLGTFGALTYELRGGQAAYFSVNADNGTISAAQILDYDTLPQYQFSLMAKDGGGF 234

Query: 121 -LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGD 177
                 ATV +++ +VND DP F    Y   +      +L  G+++ +V A D D G+
Sbjct: 235 YQEIAIATVTVTLQDVNDNDPEFTGMPYTSDIAE----NLPAGTIVFQVTATDKDSGE 288


>gi|62896679|dbj|BAD96280.1| protocadherin beta 7 precursor variant [Homo sapiens]
          Length = 793

 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 54/176 (30%), Positives = 80/176 (45%), Gaps = 27/176 (15%)

Query: 95  GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFL 151
           G +  ++ LDYE   ++ F V ATD     +++ A V + V++ ND  P   YP      
Sbjct: 511 GHLFALRSLDYEALQAFEFRVGATDRGSPALSSEALVRVLVLDANDNSPFVLYPLQNSSA 570

Query: 152 PH---IPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSI-NDSGHISIVD- 203
           P    +P A   PG ++ KV A DGD G    LS   L+     +F +   +G +     
Sbjct: 571 PCTEPLPRA-AEPGYLVTKVVAVDGDSGQNAWLSYQLLKATEPGLFGVWAHNGEVRTARL 629

Query: 204 LSALNTSTIQLVVVATDTGNPPRQASVPAIMH-------------FPEAIVQQASS 246
           LS  + +  +LVV+  D G PPR A+  A +H              PEA   QA+S
Sbjct: 630 LSERDAAKQRLVVLVKDNGEPPRSAT--ATLHVLLVDGFSQPYLRLPEAAPDQANS 683



 Score = 40.4 bits (93), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 44/137 (32%), Positives = 59/137 (43%), Gaps = 21/137 (15%)

Query: 103 LDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADL 159
           LD E    Y  T+  TD     + T   + + V +VND  P F    Y LF+      + 
Sbjct: 409 LDRERNTEYNITITVTDLGTPRLKTEHNITVLVSDVNDNAPAFTQTSYTLFVRE----NN 464

Query: 160 TPGSVIGKVEAADGDKGD--RVTLSL------RGPYEKMFSIN-DSGH---ISIVDLSAL 207
           +P   IG V A D D G   +V  SL        P   + SIN D+GH   +  +D  AL
Sbjct: 465 SPALPIGSVSATDRDSGTNAQVIYSLLPSQDPHLPLTSLVSINADNGHLFALRSLDYEAL 524

Query: 208 NTSTIQLVVVATDTGNP 224
                +  V ATD G+P
Sbjct: 525 Q--AFEFRVGATDRGSP 539


>gi|336244965|gb|AEI28400.1| FAT tumor suppressor-like protein 4, partial [Scincella reevesii]
          Length = 254

 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 54/192 (28%), Positives = 99/192 (51%), Gaps = 12/192 (6%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRDLR--VKYWLS-NDYGERFSISRQ-GDISLM 100
           FS++ YS    EN+ + Y + +V+ +   DL   + Y ++  D    F+I++  G I+  
Sbjct: 4   FSQDIYSFVVFENVALGYHVGSVSAST-MDLNTNITYLITTGDQRGMFAINKMTGLITTA 62

Query: 101 QCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLT 160
             +D E +D Y+  V A+   +T  A VNI+V ++ND  P F +    + +    + + +
Sbjct: 63  SIIDREEQDFYQLKVVASGGAITGDALVNITVRDLNDNSPHFLHAVESVNV----VENWS 118

Query: 161 PGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIND-SGHISIVDLSALNTSTIQLVVV 217
            G  I + +A D D+G    V  +L+   + +FS++  SG IS+     +N  + Q+ + 
Sbjct: 119 TGHTIFQAKAVDPDEGVNGMVFYNLKQNPKDLFSVDQHSGAISLTGPLDVNAGSYQVEIS 178

Query: 218 ATDTGNPPRQAS 229
           A+D G P R +S
Sbjct: 179 ASDLGVPQRSSS 190


>gi|449269882|gb|EMC80622.1| Protocadherin Fat 1 [Columba livia]
          Length = 4590

 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 40/147 (27%), Positives = 73/147 (49%), Gaps = 11/147 (7%)

Query: 43   LQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWL---SNDYGERFSISR-QGDIS 98
            + F +  +S + +E+ PV +++  +       L    W      +Y  RF + +  G I 
Sbjct: 1357 IYFEEAFFSFTVMESDPVAHMIGVIAVEP---LGTPVWFDITGGNYDSRFDVDKGTGTII 1413

Query: 99   LMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLAD 158
            + + LD E + +Y  TV ATD   T S  V I V++ N+  P+F   +YE+ +P     D
Sbjct: 1414 VARPLDAEQKSNYNLTVEATDGTRTISTQVYIKVIDTNNHRPQFSASKYEVVIPE----D 1469

Query: 159  LTPGSVIGKVEAADGDKGDRVTLSLRG 185
              P + I +V A D D+ +++  +++G
Sbjct: 1470 TMPETEILQVSATDRDEKNKLIYTMQG 1496



 Score = 58.5 bits (140), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 64/238 (26%), Positives = 111/238 (46%), Gaps = 20/238 (8%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWLSNDYG-ERFSISRQGDISLM 100
            FS+NEY V   EN P+  ++  V            + Y + ND+  +RF  + +G I   
Sbjct: 2493 FSQNEYEVELAENAPMRTLVTQVKATDEDSGTYGHITYHIVNDFAKDRFYTNERGQIFTS 2552

Query: 101  QCLDYET--EDSYRFTVYATDTLMTTS-ATVNISVVNVNDWDPRFRYPQYELFLPHIPLA 157
            + LD ET  E     ++ A D+    +  T+N+ + + ND  P+FR  +YE+ +     +
Sbjct: 2553 EKLDRETQAEKVIAISLMAKDSGGKVAFCTINVILTDDNDNAPQFRATEYEVNIG----S 2608

Query: 158  DLTPGSVIGKVEAADGDKGDR--VTLSLRGPYEKM---FSIND-SGHISIVD-LSALNTS 210
            D+  G+ + KV A+D D+G    +T ++    E +     I+  SG I+  + L  L   
Sbjct: 2609 DVPRGTSVIKVWASDADEGTNADITYAIEAESENVKENLEIDSLSGIITTKESLIGLENE 2668

Query: 211  TIQLVVVATDTGNPPRQASVPAIMHF--PEAIVQQASSKLNSGTSSTVLIILGVVLIV 266
             +   V A D G+P +++ VP       PE  + + S    S T S  + +  V+ I+
Sbjct: 2669 FLTFFVRAVDGGSPQKESVVPVYARILPPEVPLPKFSEPFYSYTVSEDIPVGTVIDII 2726



 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 62/211 (29%), Positives = 100/211 (47%), Gaps = 17/211 (8%)

Query: 29   ATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLS------ 82
            ++LIVS    +     F   EYS S  E++ V   +L +     RD+     ++      
Sbjct: 3215 SSLIVSVLDINDNPPVFEHREYSASVSEDVLVGTEVLQIYA-ASRDIEANAEITYSIVSG 3273

Query: 83   NDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDW 138
            N++G +FSI S  G I +++ LDYE+   Y  TV ATD     ++   TVNI+V ++ND 
Sbjct: 3274 NEHG-KFSIDSTTGAIFIIESLDYESSHEYYLTVEATDGGTPSLSDVVTVNINVTDINDN 3332

Query: 139  DPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS-LRGPYEKMFSINDS- 196
             P F    Y   +    + + +  +V+   + ADG   + +  + + G     F+I+ + 
Sbjct: 3333 TPVFSQDTYTAVISEDAILEQSVITVMA--DDADGPSNNCIHYTIIDGNQGNPFTIDPTR 3390

Query: 197  GHISIVD-LSALNTSTIQLVVVATDTGNPPR 226
            G I +   L     S   L V A+D GNPPR
Sbjct: 3391 GEIKVTKLLDREKISGYTLTVQASDNGNPPR 3421



 Score = 54.7 bits (130), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 55/194 (28%), Positives = 88/194 (45%), Gaps = 12/194 (6%)

Query: 12   TLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNY-VLLTVTTN 70
            TL V+A    N  R    T+ +  +  +     FSK  YSV   EN P+ + VL  V T+
Sbjct: 3408 TLTVQASDNGNPPRLNTTTVNIDVSDVNDNPPVFSKGNYSVIIQENKPIGFSVLQLVVTD 3467

Query: 71   KPRDLRVKYWL----SNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDT---LMT 123
            K        +L    S +    F I++QG ++    L+ +  D Y   V ATD     ++
Sbjct: 3468 KDSSHNGPPFLFTILSGNEENTFQINQQGVLTTTAALNRKVRDHYLLHVKATDNGKPPLS 3527

Query: 124  TSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSL 183
            +   ++I V+  + + P       E+F+      +   G VIGK+ A D D  D +T SL
Sbjct: 3528 SLTYIDIRVIEESIYSPAIL--PLEIFI--TAFGEEYSGGVIGKIHATDQDVYDTLTYSL 3583

Query: 184  RGPYEKMFSINDSG 197
                E +FS++ +G
Sbjct: 3584 DPKMESLFSVSSTG 3597



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 60/225 (26%), Positives = 109/225 (48%), Gaps = 19/225 (8%)

Query: 13   LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTT--- 69
            L+V+A   D   R+  A +I++    +    +F+ + YS++  EN     +L  V     
Sbjct: 3096 LLVKAT--DGGGRFCQANIILTLEDVNDNAPEFTADPYSITVFENTEPKTLLTRVQATDA 3153

Query: 70   NKPRDLRVKYWLSNDYGERFSISR-QGDISLMQCLDYETEDSYRFTVYATDT----LMTT 124
            +   + ++ Y L N    +FSI    G I L + LD E +  Y  T+ ATD      +++
Sbjct: 3154 DAGMNRKIHYSLVNSAEGQFSIDEFSGIIRLEKPLDRELQAVYTLTLKATDEGLPRRLSS 3213

Query: 125  SATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAA--DGDKGDRVTLS 182
            ++++ +SV+++ND  P F + +Y   +      D+  G+ + ++ AA  D +    +T S
Sbjct: 3214 TSSLIVSVLDINDNPPVFEHREYSASVSE----DVLVGTEVLQIYAASRDIEANAEITYS 3269

Query: 183  L-RGPYEKMFSIND-SGHISIVD-LSALNTSTIQLVVVATDTGNP 224
            +  G     FSI+  +G I I++ L   ++    L V ATD G P
Sbjct: 3270 IVSGNEHGKFSIDSTTGAIFIIESLDYESSHEYYLTVEATDGGTP 3314



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/140 (30%), Positives = 72/140 (51%), Gaps = 16/140 (11%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSN-DYGERFSIS-RQGDISLMQC 102
            F K  YS    EN+ ++  ++ V  N P  L+V Y +++ D   +F+I+   G ++++  
Sbjct: 2183 FEKPFYSAEIPENIQLHSPVVHVQANSPEGLKVFYSITDGDPFSQFTINFNTGVVNVVAP 2242

Query: 103  LDYETEDSYRFTVYATDTLMTTSATVNISVV--NVNDWDPRFRYPQYELFLPHIPLADLT 160
            LD+E+  +Y+ ++ ATD+L    A V + ++  ++ND  P F    Y         A L+
Sbjct: 2243 LDFESHPAYKLSIRATDSLTGAHADVFVDIIVEDINDNPPVFTEQSY--------TATLS 2294

Query: 161  PGSVIG----KVEAADGDKG 176
              SVIG    +V A D D G
Sbjct: 2295 EASVIGTSVVQVSATDADSG 2314



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 64/247 (25%), Positives = 116/247 (46%), Gaps = 24/247 (9%)

Query: 4    EDDFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYV 63
            E++FL   T  VRA+   +  + ++  +        +   +FS+  YS +  E++PV  V
Sbjct: 2666 ENEFL---TFFVRAVDGGSPQKESVVPVYARILPPEVPLPKFSEPFYSYTVSEDIPVGTV 2722

Query: 64   LLTVTTNKPRDLRVKYWLSN----DYGERFSISRQ-GDISLMQCLDYETEDSYRFTVYAT 118
            +  +     + L       N    +  + F I RQ G + L + LD+ET   Y+F+V A 
Sbjct: 2723 IDIIKAEHNQTLVYSLIKGNTPESNRDDFFVIDRQTGALKLEKNLDHETTKWYQFSVQAQ 2782

Query: 119  ----DTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGD 174
                D  + +S  V+I V +VND  P      YE F+    + ++  G+ + +V+  D D
Sbjct: 2783 YASEDYNVVSSVEVSIQVKDVNDNQPVLESNPYEAFI----VENMPAGTRVIQVKGTDLD 2838

Query: 175  KG--DRVTLSLRGPYE----KMFSIN-DSGHISIV-DLSALNTSTIQLVVVATDTGNPPR 226
             G   +VT SL    E    + F+IN ++G I+ + +L        ++ V+A+D G   +
Sbjct: 2839 SGLNGQVTYSLDPSQELDTIESFTINMETGWITTLKELDHEKRDKYRITVIASDRGEKIQ 2898

Query: 227  QASVPAI 233
             +S+  +
Sbjct: 2899 LSSLAVV 2905



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 41/145 (28%), Positives = 66/145 (45%), Gaps = 8/145 (5%)

Query: 90   SISRQGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYEL 149
            +I  +  + + + LD E +D+Y   + ATD    T A V + V++ ND  P      Y  
Sbjct: 2972 NIQNEWKVYVKKPLDREEKDNYLLNITATDGTFATRAVVEVKVLDANDNSPVCEKALYTD 3031

Query: 150  FLPHIPLADLTPGSVIGKVEAADGD--KGDRVTLSLRGPYEKMFSIN-DSGHISI-VDLS 205
             +P     D  PG +I +V A D D      +T +L G   + F +  D+G +   + L 
Sbjct: 3032 SVPE----DALPGKLIMQVSATDADIRSNAEITYTLHGTGAEKFRLTPDTGELKTSMPLD 3087

Query: 206  ALNTSTIQLVVVATDTGNPPRQASV 230
                +   L+V ATD G    QA++
Sbjct: 3088 REQQAVYYLLVKATDGGGRFCQANI 3112



 Score = 48.9 bits (115), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 51/173 (29%), Positives = 81/173 (46%), Gaps = 24/173 (13%)

Query: 19   QYDNQDRYALATLIVSKAGTSLRELQ--FSKNEYSVSALENLPVNYVLLTVTTNKPRDL- 75
            QY ++D   ++++ VS     + + Q     N Y    +EN+P    ++ V   K  DL 
Sbjct: 2782 QYASEDYNVVSSVEVSIQVKDVNDNQPVLESNPYEAFIVENMPAGTRVIQV---KGTDLD 2838

Query: 76   -----RVKYWLSN----DYGERFSISRQ-GDISLMQCLDYETEDSYRFTVYATDT----L 121
                 +V Y L      D  E F+I+ + G I+ ++ LD+E  D YR TV A+D      
Sbjct: 2839 SGLNGQVTYSLDPSQELDTIESFTINMETGWITTLKELDHEKRDKYRITVIASDRGEKIQ 2898

Query: 122  MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGD 174
            +++ A V ++V +VND  PRF    Y+  +      D  PG VI  +   D D
Sbjct: 2899 LSSLAVVEVTVTDVNDNPPRFTAEIYKGTVSE----DDPPGGVIAILSTTDAD 2947



 Score = 45.8 bits (107), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 58/215 (26%), Positives = 90/215 (41%), Gaps = 19/215 (8%)

Query: 24  DRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLR---VKYW 80
           DR A A +++   G +    +F++  Y  S  EN+P+   ++ V+   P +     V Y 
Sbjct: 443 DRRASAKVLIKVLGMNSNPPEFTQTSYKASFDENVPIGTSVMRVSARDPDEGENGYVTYS 502

Query: 81  LSNDYGERFSISR-QGDISLMQCLDYE-TEDSYRFTVYATDTLMTTSATVNISVV----N 134
           ++N     F I+   G IS  + LDYE     Y   + A+D  +     V + V     N
Sbjct: 503 IANLNPLPFVINHFSGIISTSEDLDYELMPRVYNLRIRASDWGIPYRREVEVPVTIILNN 562

Query: 135 VNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYE-KMFSI 193
           +ND  P F     E  +P     DL  G  I  V A D D+   V   +    E  +FS+
Sbjct: 563 LNDNIPLFEKVNCEGTIPR----DLGVGEQITTVSAIDADELQLVRYQIESGNELDLFSL 618

Query: 194 NDSGHI-----SIVDLSALNTSTIQLVVVATDTGN 223
           N +  +     S++D      S   L + ATD  N
Sbjct: 619 NPNSGVLSLKQSLIDGPGAKISFHSLKITATDGEN 653



 Score = 43.9 bits (102), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 56/190 (29%), Positives = 85/190 (44%), Gaps = 28/190 (14%)

Query: 56   ENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYG-ERFSISRQ-GDISLMQCLDYETEDS 110
            E+ PV   ++TV+    ++ RD  ++Y + +  G   F I  + G I     LD ET   
Sbjct: 1046 EDAPVGSSVMTVSAYDEDEGRDGEIRYSIRDGSGIGVFRIDEEKGIIETADRLDRETTSH 1105

Query: 111  YRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGK 167
            Y  TVYATD     +++   + I V +VND  P+   P   ++ P +        SVI +
Sbjct: 1106 YWLTVYATDQGVVPLSSFIEIYIEVGDVNDNAPQTTEP---VYYPEVMENSPKDVSVI-Q 1161

Query: 168  VEAADGDKGDRVTLSLRGPYEKMFSINDSGHISIVDLSALNTSTIQ-----------LVV 216
            +EA D D      L+      K+ S N  G  SI   + L T+T +           L V
Sbjct: 1162 IEAFDPDSSSSEKLTY-----KITSGNPQGFFSINPKTGLITTTSRKLDREQQGEHILEV 1216

Query: 217  VATDTGNPPR 226
            + TD G PP+
Sbjct: 1217 MVTDNGIPPK 1226



 Score = 38.9 bits (89), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 43/142 (30%), Positives = 63/142 (44%), Gaps = 15/142 (10%)

Query: 89   FSI-SRQGDISLMQCLDYETEDSYRFTVYATDT-----LMTTSATVNISVVNVNDWDPRF 142
            F+I S  G I  +  LDYE  + +RF+V   D          +A V I V+++ND  P F
Sbjct: 1821 FAIDSSTGAIRTVTSLDYEETNIFRFSVQVHDMGIPRLYAEYAANVTIYVIDINDCPPVF 1880

Query: 143  RYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG---DRVTLSLRGPYEKMFSIN-DSGH 198
                YE  +    L     G  +  V A D D G     +   + G   + FSIN  +G 
Sbjct: 1881 SRELYETSI----LVPTYKGVKVISVNATDADSGIFSQLIYSIIEGNIGEKFSINPKTGD 1936

Query: 199  ISIVDLSALNTSTIQLVVVATD 220
            I + + + L  S  +L V A+D
Sbjct: 1937 IIVQNTTQLR-SRYELTVRASD 1957



 Score = 38.5 bits (88), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 52/196 (26%), Positives = 81/196 (41%), Gaps = 18/196 (9%)

Query: 44   QFSKNEYSVSALEN-LPVNYVLLTVTTNKPRDLRVKYWLSNDYG----ERFSIS-RQGDI 97
            QFS ++Y V   E+ +P   +L    T++    ++ Y +         ++F +    G +
Sbjct: 1456 QFSASKYEVVIPEDTMPETEILQVSATDRDEKNKLIYTMQGSTDPISLKKFRLDPGTGSL 1515

Query: 98   SLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHI 154
               + LD+ET + +  TV   D    +    A + ISV + ND  P F    YE  +   
Sbjct: 1516 YTSEKLDHETMNQHILTVMVRDQDVPVKRNYARIIISVSDTNDHAPWFTSSSYEGRV--- 1572

Query: 155  PLADLTPGSVIGKVEAADGDKGDRVTLSLR---GPYEKMFSINDS-GHISIV-DLSALNT 209
                   GS + +V A D DKG    +      G     F I+   G I I  +L     
Sbjct: 1573 -YESAAVGSAVLQVTALDKDKGKNAEIVYSIESGNIGNSFFIDPVLGMIKIAKELDRSKQ 1631

Query: 210  STIQLVVVATDTGNPP 225
                L+V ATD G+PP
Sbjct: 1632 EEYSLMVKATDKGDPP 1647


>gi|119514217|gb|ABL75880.1| protocadherin 2G5 [Takifugu rubripes]
          Length = 953

 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 53/199 (26%), Positives = 98/199 (49%), Gaps = 20/199 (10%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKP-----RDLRVKYWLSNDYGERFSIS-RQGDIS 98
           FS+  Y  S  EN P++ V++ V+         R++   + L ++  + FS++ R G++ 
Sbjct: 250 FSQAVYKASLPENSPLDTVVMQVSATDADEGVNREITYGFNLLSEERQPFSLNLRTGEVR 309

Query: 99  LMQCLDYETEDSYRFTVYATDTL-MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLA 157
           L   +DYE + +Y   + A D L + + AT+ I + +VND  P  +       +P     
Sbjct: 310 LASSIDYERKATYEMQISAKDGLGLGSYATLIIEITDVNDNAPVIQLKSLTNPVPE---- 365

Query: 158 DLTPGSVIGKVEAADGDKGD----RVTLSLRGPYEKMFSINDSGHISIVDLSALN---TS 210
           D++PGS +G +   D D  +    R ++    P++ + SI +  + S+V    L+    S
Sbjct: 366 DVSPGSEVGIINVQDRDSENNRQVRCSIQQNVPFKLVPSIKN--YYSLVTTGQLDRELVS 423

Query: 211 TIQLVVVATDTGNPPRQAS 229
              + + ATD G+PP  +S
Sbjct: 424 DYNITISATDEGSPPLSSS 442



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 72/272 (26%), Positives = 116/272 (42%), Gaps = 35/272 (12%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRDLR----VKYWL--SNDYGERFS--ISRQGD 96
           F K  YS    EN      L +V+   P D R    V Y L  +   G   S  +S  GD
Sbjct: 459 FEKESYSAYVSENNRAGSTLCSVSAGDP-DWRQNGTVIYSLLAAEVNGAPVSSYVSVNGD 517

Query: 97  ISLMQC---LDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYE-- 148
             L+      DYE   S++  V A D     ++++ TV++ + +VND  P+  YP  E  
Sbjct: 518 TGLIHAVRSFDYEQLRSFKVHVMARDNGSPPLSSNVTVSVFISDVNDNSPQILYPAPEGN 577

Query: 149 LFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-DSGHISIV-D 203
            F+  +       GS++ KV A D D G    LS   ++     +FSI   SG I    D
Sbjct: 578 SFMTELVPKAAHGGSLVSKVIAVDADSGQNAWLSYHIVKSSDPGLFSIGVHSGEIRTQRD 637

Query: 204 LSALNTSTIQLVVVATDTGNPPRQASVPAIMHFPEAIVQ----------QASSKLNSGTS 253
           +S  ++    L+V   D G P   A+    +   + + +          + +SKL   TS
Sbjct: 638 ISESDSMKQNLIVAVKDNGQPSLSATCSMYLLISDNLAEVPELKDISYDEKNSKL---TS 694

Query: 254 STVLIILGVVLIVLGFVIILLILYIHKNKHTK 285
             ++ ++ V    L F+II+L +   + +  +
Sbjct: 695 YLIIALVSVSTFFLTFIIIILGVRFCRRRKPR 726


>gi|449276280|gb|EMC84894.1| Protocadherin-11 X-linked, partial [Columba livia]
          Length = 1012

 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 36/115 (31%), Positives = 61/115 (53%), Gaps = 8/115 (6%)

Query: 73  RDLRVKYWLSNDYGERFSISRQ-GDISLMQCLDYETEDSYRFTVYATDTLM---TTSATV 128
           R+  + Y L +D    F++ R+ G ++ ++ LD E +D Y FTV A D  M    T+ATV
Sbjct: 497 RNAEISYILGSDAPPIFNLDRRTGILTAVRKLDREKQDRYSFTVLAKDNGMPPLQTNATV 556

Query: 129 NISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSL 183
            +SV++ ND  P F + +Y  ++P     +L     +G +   D D G+   ++L
Sbjct: 557 TVSVLDQNDNSPAFTHNEYNFYVPE----NLPMYGTVGLITVTDADSGENAAVTL 607



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 70/252 (27%), Positives = 109/252 (43%), Gaps = 28/252 (11%)

Query: 11  ITLVVRAIQYDNQDRYAL---------------ATLIVSKAGTSLRELQFSKNEYSVSAL 55
           I   VR +  + QDRY+                AT+ VS    +     F+ NEY+    
Sbjct: 521 ILTAVRKLDREKQDRYSFTVLAKDNGMPPLQTNATVTVSVLDQNDNSPAFTHNEYNFYVP 580

Query: 56  ENLPV--NYVLLTVT-TNKPRDLRVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYR 112
           ENLP+     L+TVT  +   +  V   + N           G I      D E + SY 
Sbjct: 581 ENLPMYGTVGLITVTDADSGENAAVTLSILNGRDNFIIDPLTGVIRPNITFDREHQGSYT 640

Query: 113 FTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVE 169
           F V A D      +++A V I+VV+VND  P F  P        +P +  +PGSV+ KV 
Sbjct: 641 FQVKAVDGGRLQRSSTAKVTINVVDVNDNRPVFVIPSSNYSYELVPTS-ASPGSVVTKVF 699

Query: 170 AADGDKGDRVTLS---LRGPYEKMFSIND-SGHISIVDLSALNTSTI-QLVVVATDTGNP 224
           A D D G    L    + G    +F+I+  +G+I++ +    +   + +LV+   D G P
Sbjct: 700 AVDNDTGMNAELRYSIIGGNSRGLFTIDQLTGNITLKEKVITSDHGLHRLVIKVNDLGQP 759

Query: 225 PRQASVPAIMHF 236
               ++ A++H 
Sbjct: 760 ESLYTI-ALVHL 770



 Score = 42.0 bits (97), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 47/186 (25%), Positives = 74/186 (39%), Gaps = 16/186 (8%)

Query: 56  ENLPVN-YVLLTVTTNKPRDLRVKYWLSNDYGERFSISRQGD----ISLMQCLDYETEDS 110
           E  P+N  + L    +K  DL  K     D+   F +    D    +     LDYE    
Sbjct: 372 EKAPLNTKIALITVMDKDADLNGKVTCFTDHDVPFRLKPVFDNQFLLETATFLDYEATRE 431

Query: 111 YRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGK 167
           Y   + A+D+    +  SA + I + + ND  P F  P   L +P     +  PG+ + K
Sbjct: 432 YAIKIVASDSGKPPLNQSAMLLIKIKDENDNAPVFTQPIIGLSIPE----NNAPGTQLTK 487

Query: 168 VEAADGDKGDRVTLS--LRGPYEKMFSINDSGHI--SIVDLSALNTSTIQLVVVATDTGN 223
           + A D D G    +S  L      +F+++    I  ++  L           V+A D G 
Sbjct: 488 ISATDADSGRNAEISYILGSDAPPIFNLDRRTGILTAVRKLDREKQDRYSFTVLAKDNGM 547

Query: 224 PPRQAS 229
           PP Q +
Sbjct: 548 PPLQTN 553


>gi|327270423|ref|XP_003219989.1| PREDICTED: protocadherin gamma-A6-like [Anolis carolinensis]
          Length = 813

 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 71/285 (24%), Positives = 120/285 (42%), Gaps = 48/285 (16%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTTNKP---RDLRVKYWLSNDYGERFSI-------SR 93
           QF+K+ Y+  ++EN P    + ++  N P    + R+ Y ++ +    F +       S 
Sbjct: 450 QFTKSVYATFSMENNPRGASIFSLRANDPDWEENARLTYSIAEENVYDFPLSSLLSINSE 509

Query: 94  QGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELF 150
            G I  +   DYE     RF V A D     ++++ +V + +++ ND  P   YP     
Sbjct: 510 TGVIYALNSFDYEKIQEMRFQVKAQDGGSPSLSSNVSVTLFILDENDNAPEILYPS---- 565

Query: 151 LP------HIPLADLT--PGSVIGKVEAADGDKGDRVTLSL---RGPYEKMFSIN-DSGH 198
            P       I LA  +  PG ++ KV A D D G    LS    +     +F++   +G 
Sbjct: 566 -PPTDGSTGIELAPRSSEPGYLVTKVVAVDADSGQNAWLSYQLTKATEPGLFTLGLHTGE 624

Query: 199 IS----IVDLSALNTSTIQLVVVATDTGNPPRQASVPAIMHFPEAI------VQQASSKL 248
           I     +++  A   S   LVV+  D G PP  ASV   +   + I      +   S  +
Sbjct: 625 IRTARFLLEKDAFKQS---LVVLVKDNGQPPLSASVTVTVVLADNIPDMLTDLSNISVPV 681

Query: 249 NSGTSSTVLIILGVVLIVLGFVIILLIL-----YIHKNKHTKNNG 288
           +  +  T  +++ V  +   F+I LL+L     Y  +N     NG
Sbjct: 682 DHPSDLTFYLVVAVAFVSCMFLIFLLVLLAIKVYRWRNAQLCENG 726



 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 57/208 (27%), Positives = 90/208 (43%), Gaps = 25/208 (12%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRDL------RVKYWLSNDYGERFSI-----SR 93
           FS+  Y VS  EN+P   ++ T+   K  DL       VKY  +   G++ S      S 
Sbjct: 241 FSQTIYKVSIEENVPKGSIICTI---KATDLDEGINGEVKYSFTKT-GKKVSEIFLLNST 296

Query: 94  QGDISLMQCLDYETEDSYRFTVYATDTL-MTTSATVNISVVNVNDWDPRFRYPQYELFLP 152
            G I+L+   D+ET   Y F V A D   +   A + I+V ++ND  P         FL 
Sbjct: 297 TGKITLIGNFDFETSSFYEFEVQAEDYAGLFDRAEIEITVTDLNDNAPELTV----TFLT 352

Query: 153 HIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDS--GHISIVDLSALNTS 210
           +    +   G+VI  +   D D G+   ++   P    F +  +   + S+  LSAL+  
Sbjct: 353 NAIHENAPAGTVIAIINVEDKDSGNNGEVTCSVPRNLPFQLKKTMDNYYSLETLSALDRE 412

Query: 211 TI---QLVVVATDTGNPPRQASVPAIMH 235
            +    + ++ TD G PP   S    +H
Sbjct: 413 LVANYNITLMVTDHGTPPLSTSTIIPLH 440


>gi|449500756|ref|XP_004174871.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 1 [Taeniopygia
            guttata]
          Length = 4576

 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 66/238 (27%), Positives = 112/238 (47%), Gaps = 20/238 (8%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYG-ERFSISRQGDISLM 100
            FS+NEY V   EN P++ ++  V     +      + Y + ND+  +RF  + +G I   
Sbjct: 2489 FSQNEYEVELAENSPLHTLVTEVKATDEDSGTHGHITYHIVNDFAKDRFYTNERGQIFTA 2548

Query: 101  QCLDYET--EDSYRFTVYATDTLMTTS-ATVNISVVNVNDWDPRFRYPQYELFLPHIPLA 157
            + LD ET  E     ++ A D+    +  TVN+ + + ND  P+FR  +YE+ +      
Sbjct: 2549 EKLDRETQAEKVIAISLMAKDSGGKVAFCTVNVILTDDNDNAPQFRATEYEVNIG----T 2604

Query: 158  DLTPGSVIGKVEAADGDKGDR--VTLSLRGP---YEKMFSIND-SGHISIVD-LSALNTS 210
            D+  G+ + KV A+D D+G    +T S+       E+   I+  SG I+  + L  L   
Sbjct: 2605 DVPRGTSVIKVWASDADEGTNADITYSIEAESDNVEENLEIDSLSGIITTKESLIGLENE 2664

Query: 211  TIQLVVVATDTGNPPRQASVPAIMHF--PEAIVQQASSKLNSGTSSTVLIILGVVLIV 266
             +  +V A D G+P +++ VP       PE    + S    S T S  + I  V+ ++
Sbjct: 2665 FLTFLVRAIDGGSPQKESVVPVYARILPPEVPTPKFSEPFYSYTVSEDIPIGTVIDVI 2722



 Score = 58.5 bits (140), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 39/147 (26%), Positives = 74/147 (50%), Gaps = 11/147 (7%)

Query: 43   LQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWL---SNDYGERFSISR-QGDIS 98
            + F ++ +S + +E+ PV +++  +       L    W      +Y  RF + +  G I 
Sbjct: 1351 IYFEESFFSFTVMESDPVAHMIGVIAVEP---LGTPLWFDITGGNYDSRFDVDKGTGTII 1407

Query: 99   LMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLAD 158
            + + LD E + +Y  TV ATD   + S  V I V++ N+  P+F   +YE+ +P     D
Sbjct: 1408 VARPLDAEQKSNYNLTVEATDGTRSISTQVYIKVIDTNNHRPQFSASKYEVVIPE----D 1463

Query: 159  LTPGSVIGKVEAADGDKGDRVTLSLRG 185
              P + I +V A D D+ +++  +++G
Sbjct: 1464 TLPETEILQVSATDRDEKNKLIYTIQG 1490



 Score = 58.5 bits (140), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 84/330 (25%), Positives = 142/330 (43%), Gaps = 50/330 (15%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLS------NDYGERFSI-SRQGDI 97
            F + EYS S  E++ V   +L +     RD+     ++      N++G +FSI S  G I
Sbjct: 3218 FEQREYSASVSEDILVGTEVLQIHAAS-RDIEANAEITYSIVSGNEHG-KFSIDSTTGAI 3275

Query: 98   SLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHI 154
             +++ LDYE+   Y  TV ATD     ++   TVNI+V ++ND  P F    Y   +   
Sbjct: 3276 FIIESLDYESSHEYYLTVEATDGGTPSLSDVVTVNINVTDINDNSPVFSQDTYTAVISED 3335

Query: 155  PLADLTPGSVIGKVEAADGDKGDRVTLS-LRGPYEKMFSINDS-GHISIVD-LSALNTST 211
             + + +  +V+   + ADG   +RV  + + G     F+I+ + G I +   L     S 
Sbjct: 3336 AMLEQSVITVMA--DDADGPSNNRVHYTIIDGNQGNPFTIDPTRGEIKVTKLLDREKISG 3393

Query: 212  IQLVVVATDTGNPPRQASVPAIMHFPEAIVQQASSKLNSGTSSTVLIILGVVLIVLGFVI 271
              L V A+D G+PP+  +    +   +  V       + G  S ++     V    GF +
Sbjct: 3394 YTLTVQASDNGSPPKLNTTTVNIDVSD--VNDNPPVFSKGNYSVIIQENKPV----GFSV 3447

Query: 272  ILLILYIHKNKHTKNNGPPGSSHSKNDSFLSNVILPEKHVNVVAIPKIQENPVFNGSQEE 331
            + L++    ++ + +NGPP         FL N++               E   F  +Q+ 
Sbjct: 3448 LQLVV---TDRDSSHNGPP---------FLFNILTG------------NEEKAFQITQQG 3483

Query: 332  LQTQRGGTNSSI---YTATVKKTLSGKPEL 358
            + T     N  +   Y   VK   +GKP L
Sbjct: 3484 VLTTSAALNRKVRDHYLLHVKVADNGKPPL 3513



 Score = 54.7 bits (130), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 63/236 (26%), Positives = 113/236 (47%), Gaps = 24/236 (10%)

Query: 4    EDDFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYV 63
            E++FL   T +VRAI   +  + ++  +        +   +FS+  YS +  E++P+  V
Sbjct: 2662 ENEFL---TFLVRAIDGGSPQKESVVPVYARILPPEVPTPKFSEPFYSYTVSEDIPIGTV 2718

Query: 64   LLTVTTNKPRDLRVKYWLSN----DYGERFSISRQ-GDISLMQCLDYETEDSYRFTVYA- 117
            +  +  +  + L       N    +  + F I RQ G++ L + LD+ET   Y+F+V A 
Sbjct: 2719 IDVIKADHNQTLVYSLIKGNTPESNRDDFFVIDRQTGELKLEKNLDHETTKWYQFSVQAQ 2778

Query: 118  ---TDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGD 174
                D  + +S  V+I V + ND  P      YE F+    + +   G+ + +V+  D D
Sbjct: 2779 YANEDYNVVSSVEVSIQVKDANDNQPILESNPYEAFI----VENTPAGTRVIQVKGTDLD 2834

Query: 175  KG--DRVTLSLRGPYE----KMFSIN-DSGHISIV-DLSALNTSTIQLVVVATDTG 222
             G   +VT SL    E    + F+IN ++G I+ + +L        +++VVA+D G
Sbjct: 2835 SGLNGQVTYSLXSFSELDIIESFTINMETGWITTLKELDHEKRDKYKIIVVASDRG 2890



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 46/161 (28%), Positives = 75/161 (46%), Gaps = 12/161 (7%)

Query: 45   FSKNEYSVSALENLPVNY-VLLTVTTNKPRDLRVKYWLSN----DYGERFSISRQGDISL 99
            FSK  YSV   EN PV + VL  V T++        +L N    +  + F I++QG ++ 
Sbjct: 3428 FSKGNYSVIIQENKPVGFSVLQLVVTDRDSSHNGPPFLFNILTGNEEKAFQITQQGVLTT 3487

Query: 100  MQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
               L+ +  D Y   V   D     +++   ++I V+  + + P       E+F+     
Sbjct: 3488 SAALNRKVRDHYLLHVKVADNGKPPLSSLTYIDIRVIEESIYSPAIL--PLEIFI--TAF 3543

Query: 157  ADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSG 197
             +   G VIGK+ A D D  D +T SL    E +FS++ +G
Sbjct: 3544 GEEYSGGVIGKIHATDQDVYDTLTYSLDPKMESLFSVSSTG 3584



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 40/145 (27%), Positives = 67/145 (46%), Gaps = 8/145 (5%)

Query: 90   SISRQGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYEL 149
            +I  +  + + + LD E +D+Y   + ATD      A V + V++ ND  P      Y  
Sbjct: 2968 NIQNEWKVYVKKPLDREEKDNYLLNITATDGTFAAKAVVEVKVLDANDNSPVCEKTLYAD 3027

Query: 150  FLPHIPLADLTPGSVIGKVEAADGD--KGDRVTLSLRGPYEKMFSIN-DSGHI-SIVDLS 205
             +P     D  PG +I +V A D D      +T +L G   + F +  D+G + +++ L 
Sbjct: 3028 SVPE----DALPGKLIMQVSATDADIRSNAEITYTLHGTGAEKFRLTPDTGELKTLMALD 3083

Query: 206  ALNTSTIQLVVVATDTGNPPRQASV 230
                +   L+V ATD G    QA++
Sbjct: 3084 REQQAVYHLLVKATDGGGRFCQANI 3108



 Score = 47.8 bits (112), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 42/142 (29%), Positives = 70/142 (49%), Gaps = 18/142 (12%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGE---RFSIS-RQGDISLM 100
            F K  YS    EN+ ++  ++ V  N P    +K + S   G+   +F+I+   G  +++
Sbjct: 2177 FEKPFYSSEIPENIQLHSPVVHVQANSPEGQGLKVFYSITGGDPFNQFTINFNTGVXNVV 2236

Query: 101  QCLDYETEDSYRFTVYATDTLMTTSATVNISVV--NVNDWDPRFRYPQYELFLPHIPLAD 158
              LD+E+  +Y+ +V ATD+L    A V + ++  ++ND  P F    Y        +A 
Sbjct: 2237 APLDFESHPAYKLSVRATDSLNGAHADVFVDIIVEDINDNPPVFTEQSY--------IAT 2288

Query: 159  LTPGSVIG----KVEAADGDKG 176
            L+  SVIG    +V A D D G
Sbjct: 2289 LSEASVIGTSVAQVSATDADSG 2310



 Score = 47.4 bits (111), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 50/173 (28%), Positives = 79/173 (45%), Gaps = 24/173 (13%)

Query: 19   QYDNQDRYALATLIVSKAGTSLRELQ--FSKNEYSVSALENLPVNYVLLTVTTNKPRDL- 75
            QY N+D   ++++ VS       + Q     N Y    +EN P    ++ V   K  DL 
Sbjct: 2778 QYANEDYNVVSSVEVSIQVKDANDNQPILESNPYEAFIVENTPAGTRVIQV---KGTDLD 2834

Query: 76   -----RVKYWLSN----DYGERFSISRQ-GDISLMQCLDYETEDSYRFTVYATDT----L 121
                 +V Y L +    D  E F+I+ + G I+ ++ LD+E  D Y+  V A+D      
Sbjct: 2835 SGLNGQVTYSLXSFSELDIIESFTINMETGWITTLKELDHEKRDKYKIIVVASDRGEKIQ 2894

Query: 122  MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGD 174
            +++ A V ++V +VND  PRF    Y+  +      D  PG VI  +   D D
Sbjct: 2895 LSSMAVVEVTVTDVNDNPPRFTAEIYKGTVSE----DDPPGGVIAILSTTDAD 2943



 Score = 45.4 bits (106), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 57/215 (26%), Positives = 90/215 (41%), Gaps = 19/215 (8%)

Query: 24  DRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLR---VKYW 80
           DR A A +++   G +    +F++  Y  S  EN+P+   ++ V+   P +     V Y 
Sbjct: 437 DRRASAKVLIKVLGMNSNPPEFTQTSYKASFDENVPIGTSVMRVSAKDPDEGENGYVTYS 496

Query: 81  LSNDYGERFSISR-QGDISLMQCLDYE-TEDSYRFTVYATDTLMTTSATVNISVV----N 134
           ++N     F I+   G IS  + LDYE     Y   + A+D  +     V + V     N
Sbjct: 497 IANLNPLPFVINHFSGIISTSEDLDYELMPRVYNLRIRASDWGVPYRREVEVPVTIILNN 556

Query: 135 VNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYE-KMFSI 193
           +ND  P F     E  +P     DL  G  I  V A D D+   V   +    E  +F++
Sbjct: 557 LNDNIPLFEKINCEGIIPR----DLGVGEQITTVSAIDADELQLVRYQIESGNELDLFNL 612

Query: 194 NDSGHI-----SIVDLSALNTSTIQLVVVATDTGN 223
           N +  +     S++D      S   L + ATD  N
Sbjct: 613 NPNSGVLSLKQSLIDGLGAKMSFYSLKITATDGEN 647



 Score = 42.4 bits (98), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 56/190 (29%), Positives = 82/190 (43%), Gaps = 28/190 (14%)

Query: 56   ENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYG-ERFSISRQ-GDISLMQCLDYETEDS 110
            E+ PV   ++TV+    +  RD  ++Y + +  G   F I  + G I     LD ET   
Sbjct: 1040 EDAPVGSSVMTVSAYDEDAGRDGEIRYSIRDGSGIGVFRIDEEKGIIETADHLDRETTSH 1099

Query: 111  YRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGK 167
            Y  TVYATD     +++   + I V +VND  P+   P   ++ P +        SVI +
Sbjct: 1100 YWLTVYATDQGVVPLSSFIEIYIEVGDVNDNAPQTTEP---VYYPEVMENSPKDVSVI-Q 1155

Query: 168  VEAADGDKGDRVTLSLRGPYEKMFSINDSGHISIVDLSALNTSTIQ-----------LVV 216
            +EA D D      LS      K+ S N  G  SI   + L T+T +           L V
Sbjct: 1156 IEAFDPDSSSSEKLSY-----KITSGNPQGFFSINPKTGLITTTSRKLDREQQGEHILEV 1210

Query: 217  VATDTGNPPR 226
              TD G P +
Sbjct: 1211 TVTDNGTPAK 1220



 Score = 42.4 bits (98), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 53/196 (27%), Positives = 83/196 (42%), Gaps = 18/196 (9%)

Query: 44   QFSKNEYSVSALEN-LPVNYVLLTVTTNKPRDLRVKYWLSNDYG----ERFSIS-RQGDI 97
            QFS ++Y V   E+ LP   +L    T++    ++ Y +         ++F +    G +
Sbjct: 1450 QFSASKYEVVIPEDTLPETEILQVSATDRDEKNKLIYTIQGSTDPISLKKFRLDPATGSL 1509

Query: 98   SLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHI 154
               + LD+ET + +  T+   D    +    A V ++V + ND  P F  P YE  +   
Sbjct: 1510 YTSEKLDHETMNQHILTIMVRDQDVPVKRNYARVVVNVSDTNDHAPWFTSPAYEGRV--- 1566

Query: 155  PLADLTPGSVIGKVEAADGDKGDRVTLSLR---GPYEKMFSINDS-GHISIV-DLSALNT 209
                   GS + +V A D DKG    +      G     F I+   G I I  +L   N 
Sbjct: 1567 -YESAAVGSAVLQVTALDKDKGKNAEIVYSIESGNIGNSFLIDPILGMIKIAKELDRSNQ 1625

Query: 210  STIQLVVVATDTGNPP 225
                L+V ATD G+PP
Sbjct: 1626 EEYNLMVKATDKGHPP 1641



 Score = 40.8 bits (94), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 44/142 (30%), Positives = 64/142 (45%), Gaps = 15/142 (10%)

Query: 89   FSI-SRQGDISLMQCLDYETEDSYRFTVYATDT-----LMTTSATVNISVVNVNDWDPRF 142
            F+I S  G I  +  LDYE  + + F+V   DT         +A V I V+++ND  P F
Sbjct: 1815 FAIDSSTGAIRTVMSLDYEETNIFHFSVQVHDTGIPRLYAEYAANVTIYVIDINDCPPVF 1874

Query: 143  RYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG---DRVTLSLRGPYEKMFSIN-DSGH 198
                YE  L    L     G  +  V A D D G     +   + G   + FSIN  +G 
Sbjct: 1875 SRELYETSL----LVPTYKGVKVIGVNATDADSGIFSQLIYSIIEGNIGEKFSINPKTGD 1930

Query: 199  ISIVDLSALNTSTIQLVVVATD 220
            I++ + + L  S  +L V A+D
Sbjct: 1931 ITVQNTTQLR-SRYELTVRASD 1951


>gi|156399383|ref|XP_001638481.1| predicted protein [Nematostella vectensis]
 gi|156225602|gb|EDO46418.1| predicted protein [Nematostella vectensis]
          Length = 1888

 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 93/207 (44%), Gaps = 35/207 (16%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDL----RVKYWLS-NDYGERFSISRQ-GDIS 98
            F +  Y++S LE+      LL V+    RD     RV Y++S  +    F ++R+ G I 
Sbjct: 1471 FEEKVYNISVLESAASGMELLKVSAVD-RDFGVNARVSYYISEGNINGAFEVNREFGTIR 1529

Query: 99   LMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLAD 158
            L   LD E  D Y+ T+ A D   +  ATVN+ V+++ND +P+F    Y + +      +
Sbjct: 1530 LAGTLDRENVDHYKLTLTAKDGKYSGEATVNVYVLDINDNNPKFEKSHYRVNVSE----N 1585

Query: 159  LTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSGHISIVDLSALNTSTIQLVVVA 218
               G+++ K+ A+D D G+       G +  ++ I+  G                L++V 
Sbjct: 1586 RPAGTLVVKLRASDPDLGE------SGKF--LYDISGQG----------------LMIVG 1621

Query: 219  TDTGNPPRQASVPAIMHFPEAIVQQAS 245
                N PR    P I H  E +   AS
Sbjct: 1622 DVNDNKPRFPDEPYIGHVMENLKAGAS 1648



 Score = 51.6 bits (122), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 56/159 (35%), Positives = 75/159 (47%), Gaps = 16/159 (10%)

Query: 77  VKYWLSNDYGERFSISRQ-GDISLMQCLDYETEDSYRFTVYATD-TLMTTSATVNISVVN 134
           VKY L N     F+I+ Q G I     L +   D Y F V ATD T      T NI + +
Sbjct: 260 VKYGLENADSFPFTITPQTGVIKTTAELRHFERDFYAFVVTATDSTPPFHKVTANIQLGD 319

Query: 135 VNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSL----RGPYE 188
           VND  P F  P Y++F+      +L  G VIG+  A D DKG   RVT S+        +
Sbjct: 320 VNDNPPLFAQPVYKVFVRE----NLQGGHVIGQFAARDPDKGANARVTYSIINFEDSRSD 375

Query: 189 KMFSINDSGHISIVDLSALNTSTIQ---LVVVATDTGNP 224
            +FSI+    + +  LS L+   +    L + A DTG P
Sbjct: 376 NLFSIHPFTGV-LTALSTLDREDLSRHILTIQAKDTGVP 413



 Score = 48.1 bits (113), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 63/230 (27%), Positives = 93/230 (40%), Gaps = 20/230 (8%)

Query: 12  TLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNK 71
           +  V A       R ++AT+ VS    S     F K+ Y     EN  +   ++ V    
Sbjct: 81  SFTVTAFDQGKPSRSSVATVYVSIHSFSDSPPVFRKSTYEKRIPENFALKRGIVRVEALA 140

Query: 72  PRDLRV---KYWL-SNDYGERFSISR-QGDISLMQCLDYETEDSYRFTVYATDTL----- 121
                    +Y+L   D   +F++ R  G++SL + LDYE   SYR  + A         
Sbjct: 141 NGGGAGGELRYYLVGGDPQSQFNVDRLTGELSLKKPLDYEKVASYRLRIRAVQKTWRPNM 200

Query: 122 --MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTP-GSVIGKVEAADGDKGDR 178
             +   ATV I+V ++ND  PRF  P+  L      +    P G+ + KV A D D G  
Sbjct: 201 PELPAEATVLITVTDINDNAPRFAIPREPLV---TSIHQFRPAGTTVTKVTAYDQDSGSH 257

Query: 179 --VTLSLRGPYEKMFSIN-DSGHI-SIVDLSALNTSTIQLVVVATDTGNP 224
             V   L       F+I   +G I +  +L          VV ATD+  P
Sbjct: 258 ALVKYGLENADSFPFTITPQTGVIKTTAELRHFERDFYAFVVTATDSTPP 307



 Score = 45.4 bits (106), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 57/214 (26%), Positives = 95/214 (44%), Gaps = 30/214 (14%)

Query: 40  LRELQFSKNEYSVSALENLPVNYVLLTVTTNKP-RDLRVKYWLSNDYGERFSIS-RQGDI 97
           L + Q  +++   S  E+  +   + T+ T KP R+ R  Y + +    +F +    GD+
Sbjct: 728 LLKYQPQQDQQRTSIQESAALGTRVFTLLTAKPIRNAR--YSIVSPLETKFRVDPYSGDV 785

Query: 98  SLMQCLDYETEDSYRFTVYATDTL-------MTTSATVNISVVNVNDWDPRFRYPQYELF 150
            +   LDYET  ++RFT  A +T        + + A V I + ++ND  P F    Y   
Sbjct: 786 RVRSGLDYETVKTHRFTAEARNTRDNTDYANIDSEADVKIVLRDLNDNPPEFFELSYRDT 845

Query: 151 LPH-IPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYE-----KMFSIND-SGHISIVD 203
           LP   P+     G+ +  V A D D G      + G +      + FS++  +G I+   
Sbjct: 846 LPESAPV-----GTTVLSVTARDLDSG------VNGQFHYFVESQFFSVDPYTGWITTKR 894

Query: 204 LSALNTS-TIQLVVVATDTGNPPRQASVPAIMHF 236
                T+ T   +VVA D+GNP R  +   I+  
Sbjct: 895 PLDFETNPTHSFLVVAQDSGNPARNGTARVIVEL 928



 Score = 44.3 bits (103), Expect = 0.093,   Method: Compositional matrix adjust.
 Identities = 47/174 (27%), Positives = 81/174 (46%), Gaps = 11/174 (6%)

Query: 95  GDISLMQCLDYETEDSYRFTVYATDTLMTTSAT-VNISVVNVNDWDPRFRYPQYELFLPH 153
           G ++ ++ LD E +  Y+  V A D     S   V ++V+NVND  P+F   +  +   +
Sbjct: 586 GWLTTVRPLDNEKQSRYKIIVMAMDLKNRVSKVEVIVNVLNVNDNKPKFVNIRNGIIEGN 645

Query: 154 IPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKM---FSINDSGHISIVDLSALNTS 210
           + L D+  GS +  ++A D D+ D   LS R   EK    FS+N+ G ++   +     S
Sbjct: 646 V-LKDVAVGSRVMVIDAVDADRSD--ILSYRIEDEKARRYFSVNNEGVVTSTRVLRDLDS 702

Query: 211 TIQLVVVATDTGNPPRQASVPA----IMHFPEAIVQQASSKLNSGTSSTVLIIL 260
                V  +D G PP  A   A    + + P+   Q+ S + ++   + V  +L
Sbjct: 703 PYLFKVSVSDNGKPPMVAQAMARVVLLKYQPQQDQQRTSIQESAALGTRVFTLL 756



 Score = 44.3 bits (103), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 54/180 (30%), Positives = 85/180 (47%), Gaps = 28/180 (15%)

Query: 40  LREL-----QFSKNEYSVSALENLPVNYVLLTVTTNKPRDL------RVKYWLSNDYGER 88
           LR+L     +F +  Y  +  E+ PV   +L+VT    RDL      +  Y++ + +   
Sbjct: 827 LRDLNDNPPEFFELSYRDTLPESAPVGTTVLSVTA---RDLDSGVNGQFHYFVESQF--- 880

Query: 89  FSIS-RQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRY 144
           FS+    G I+  + LD+ET  ++ F V A D+       +A V + + NVND  PRF  
Sbjct: 881 FSVDPYTGWITTKRPLDFETNPTHSFLVVAQDSGNPARNGTARVIVELTNVNDNAPRFSQ 940

Query: 145 PQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSL-RGPYEKMFSIND-SGHISIV 202
             Y +F+      D     ++  V+A D D  D VT S+  G     F IN+ +G I +V
Sbjct: 941 SLYNVFVAE----DAGSDQLVATVQATDKDN-DPVTYSIASGDNTTNFVINNKTGVIKLV 995



 Score = 43.9 bits (102), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 43/169 (25%), Positives = 74/169 (43%), Gaps = 20/169 (11%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTTNKPRD----LRVKYWLSNDYGER--FSISRQ-GD 96
            QF+K  ++    E+  +   + TV+    RD     ++KY L  +  E   F I    G+
Sbjct: 1721 QFTKRVFAAKISESAALGSTVATVSATD-RDEGVNAKLKYSLEYEAKEERPFRIDETTGE 1779

Query: 97   ISLMQCLDYETEDSYRFTVYATDT----LMTTSATVNISVVNVNDWDPRFRYPQYELFLP 152
            I L   LDYET+ +YR  V   D+      + +A++ + V++ ND  PRF    Y   + 
Sbjct: 1780 IILALTLDYETKRNYRLKVKVRDSGVPLSFSDTASLTVEVLDANDRAPRFEPLSYSAVVR 1839

Query: 153  HIPLADLTPGSVIGKVEAADGD----KGDRVTLSLRGPYEKMFSINDSG 197
                 D+  G  + ++E  D D     G      + G  + +F + + G
Sbjct: 1840 E----DVDIGERLLRLEVTDPDSDSQNGGPFKFGISGNEKNLFELTEDG 1884



 Score = 40.4 bits (93), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 41/159 (25%), Positives = 68/159 (42%), Gaps = 25/159 (15%)

Query: 89   FSIS-RQGDISLMQCLDYETEDSYRFTVYATDTLMTTS---------ATVNISVVNVNDW 138
            F+I  + G ++ +Q  D E +  Y+  +   D  + +S           V+I + + ND 
Sbjct: 1088 FAIDDKTGIVTTLQSFDREEKPVYQIRIIGRDGGLGSSRGAERLMGVCQVDIRIGDKNDH 1147

Query: 139  DPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSINDS 196
            DP F+  QYE  +      D   G  +  V A D D G   ++T S++ P    F+I+ +
Sbjct: 1148 DPVFQNKQYEATIKE----DFEVGRSVLHVSATDADAGSNAKLTYSIQ-PQNDYFAIDRA 1202

Query: 197  GHISIVDLSAL--------NTSTIQLVVVATDTGNPPRQ 227
                   +S L        ++  I   VVA D GN  R+
Sbjct: 1203 TGTVTSKMSLLSEAKSEGQSSRVISFNVVANDNGNVSRK 1241



 Score = 39.7 bits (91), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 58/202 (28%), Positives = 85/202 (42%), Gaps = 23/202 (11%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKP---RDLRVKYWLSNDYGER----FSISR-QGD 96
           F++  Y V   ENL   +V+       P    + RV Y + N    R    FSI    G 
Sbjct: 327 FAQPVYKVFVRENLQGGHVIGQFAARDPDKGANARVTYSIINFEDSRSDNLFSIHPFTGV 386

Query: 97  ISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
           ++ +  LD E    +  T+ A DT    M+  A + I V +VND  PRF    + +    
Sbjct: 387 LTALSTLDREDLSRHILTIQAKDTGVPRMSGLAQIVIIVDDVNDHAPRFSSGSFHV---E 443

Query: 154 IPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSINDSGHI--SIVDLSALN 208
           IPL +  P S + +  A D D G    +    ++G  +  FSIN   HI  S+     L 
Sbjct: 444 IPL-NTPPDSRVFQARALDPDGGHNGLVRYSIIQGNKQGYFSIN---HIDGSLFLDEKLT 499

Query: 209 TSTIQLVVVATDTGNPPRQASV 230
           T     + V  D G P R ++ 
Sbjct: 500 TLEPIDIKVTRDMGQPERSSTA 521



 Score = 38.1 bits (87), Expect = 7.6,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 73/151 (48%), Gaps = 17/151 (11%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWL------SNDYGERFSIS-RQGDI 97
            FS+  Y V+  E++ +   L+ ++ +   +  + Y +      S++   RF I   +G +
Sbjct: 1260 FSQGVYVVTVREDIAIGSSLIQLSASTKTNKLIYYSIVPGNVPSSNNPPRFQIRISKGIV 1319

Query: 98   SLMQCLDYETEDSYRFTVYA--TDTLMTTSATVNISVVNVNDWDPRFRYPQYELFL-PHI 154
                 LD++   ++  T+ A  TD  M+  A + I + +VND  P F  P+Y+  +  + 
Sbjct: 1320 WNSHRLDHKETSNFSLTIRAETTDPPMSAFANLKIFLEDVNDNPPEFVMPRYQGHVSENA 1379

Query: 155  PLADLTPGSVIGKVEAADGDKGD--RVTLSL 183
            P+     GS + +V A D D G+  RVT S 
Sbjct: 1380 PI-----GSSVLQVSARDRDSGENGRVTYSF 1405


>gi|432093130|gb|ELK25388.1| Protocadherin-16 [Myotis davidii]
          Length = 3060

 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 58/181 (32%), Positives = 85/181 (46%), Gaps = 20/181 (11%)

Query: 64   LLTVTTNKPRDLRVKYWLSNDY-GERFSISRQ-GDISLMQCLDYETEDSYRFTVYATDT- 120
            +L V    P    V Y L+ D     F +  Q G + +   LD E+++ Y   V A    
Sbjct: 1016 ILQVKARAPDGGSVTYHLAGDGPSSPFGLEPQSGWLWVRAALDRESQELYTLKVMAVSGS 1075

Query: 121  -----LMTTSATVNISVVNVNDWDPRF-RYPQYELFLPHIPLADLTPGSVIGKVEAADGD 174
                   T +ATV +S++N ND  PR    P +     + P     PGS +G+V A+D D
Sbjct: 1076 KAESGQQTGTATVRVSILNQNDHSPRLSEEPTFLAVAENQP-----PGSSVGRVYASDRD 1130

Query: 175  KG--DRVTLSLRGPYE--KMFSIN-DSGHISIVD-LSALNTSTIQLVVVATDTGNPPRQA 228
             G   R+T SLR   E  K F I+  +G ++ +  L     S+ QL+V   D G+PPR A
Sbjct: 1131 SGPNGRLTYSLRQMSEDSKAFRIHPQTGEVTTLQTLDRERQSSYQLLVRVQDGGSPPRSA 1190

Query: 229  S 229
            +
Sbjct: 1191 T 1191



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 61/191 (31%), Positives = 95/191 (49%), Gaps = 21/191 (10%)

Query: 56  ENLPVNYVLLTVTTNKPRDLRVKYW-LSNDYGE-RFSISRQGDISLMQC----LDYETED 109
           E  P   ++  ++ + P D    +  +S + GE  F++S Q  +  + C    LD E  D
Sbjct: 374 EAAPPGQLVARISVSDPDDGDFAHVNVSLEGGEGHFALSTQDSVIYLVCVARQLDREERD 433

Query: 110 SYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLT-PGSVI 165
           +Y   V ATD+    +   A   + V +VND  P F     +L+ P  PL ++  PGS +
Sbjct: 434 AYNLRVTATDSGSPPLRAEAAFVLHVTDVNDNVPAF---DRQLYRPE-PLPEVALPGSFV 489

Query: 166 GKVEAADGDKG--DRVTLSLR-GPYEKMFSINDSGHISIVDLSALN---TSTIQLVVVAT 219
            +V A D D+G   +VT SL  G + + FSI+ +  I I   ++L+       QL+VVAT
Sbjct: 490 VRVTARDPDQGTNGQVTYSLAPGSHTRWFSIDPTSGI-ITTAASLDYELEPQPQLIVVAT 548

Query: 220 DTGNPPRQASV 230
           D G PP  +S 
Sbjct: 549 DGGLPPLTSSA 559



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 55/197 (27%), Positives = 82/197 (41%), Gaps = 12/197 (6%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKP---RDLRVKYWLSNDYGERFSIS-RQGDISLM 100
            F    YSV   E+ P   +LL +  + P    +  V Y+L       F +    G++   
Sbjct: 1632 FPVPAYSVEVPEDAPAGTLLLQLQAHDPDAGANGHVTYYLGAGAAGAFLLEPSSGELRTA 1691

Query: 101  QCLDYETEDSYRFTVYATDTL----MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
              LD E   SY F+V A D      ++T+  V I+V +VND  P F      L LP    
Sbjct: 1692 TALDREQCSSYSFSVSAVDGAAAGPLSTTVPVTITVRDVNDHAPTFPSSPLRLRLPRPGP 1751

Query: 157  ADLTPGSVIGKVEAADGDKGDRVTL--SLRGPYEKMFSIND-SGHISIVDLS-ALNTSTI 212
            +  TP   +  + A D D G   ++   L G      +++  +G I +      L     
Sbjct: 1752 SLSTPTLALATLRAEDRDAGANASILYRLAGTPPPGTTVDSYTGEIRVTRSPVGLGPRDR 1811

Query: 213  QLVVVATDTGNPPRQAS 229
             L +VATD G P R A+
Sbjct: 1812 VLFIVATDLGRPARSAT 1828



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 62/197 (31%), Positives = 91/197 (46%), Gaps = 24/197 (12%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTN----KPRDLRVKYWLSN-DYGERFSISRQ-GDIS 98
            F++  Y V+  E+ PV   LL V  +     P  L V++ LS+ D    F +    G + 
Sbjct: 2379 FTRASYRVAVSEDTPVGAELLHVEASDADPGPHGL-VRFTLSSGDPAGLFELDESSGALR 2437

Query: 99   LMQCLDYETEDSYRFTVYATDTLMT--TSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
            L + LD ET+  ++  V A D +      A V I V +VND  P F      L L    L
Sbjct: 2438 LARPLDCETQARHQLVVQAADPVGAHFALAPVTIEVQDVNDHGPAF-----PLSLLSTSL 2492

Query: 157  AD-LTPGSVIGKVEAADGDKGD----RVTLSLRGP---YEKMFSINDS-GHI-SIVDLSA 206
            A+   PG+++  + A DGD G       TL   GP     + F++N S G + + V    
Sbjct: 2493 AENQPPGTLVTTLHAIDGDAGAFGRLHYTLLEAGPGPEGREAFALNSSTGELRARVAFDY 2552

Query: 207  LNTSTIQLVVVATDTGN 223
             +T + QL+V A D GN
Sbjct: 2553 EHTGSFQLLVGAADAGN 2569



 Score = 52.0 bits (123), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 65/241 (26%), Positives = 108/241 (44%), Gaps = 38/241 (15%)

Query: 11   ITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLT---- 66
            + +V+ A  +    R A AT+ V     +     F+   Y V+  E+LP    LLT    
Sbjct: 2225 VDVVLEARDHGMPGRAARATVHVQLQDQNDHAPSFTLPHYRVAVTEDLPPGSTLLTLEAT 2284

Query: 67   ---------------VTTNKPRDLRVKYWLSNDYGERFSISRQ--GDISLMQCLDYETED 109
                           V+ N+ R  +++  L+ + GE   +  Q  G + L++ LD+E+  
Sbjct: 2285 DADGSRTHATVDYSIVSGNRGRVFQLEPRLA-EAGESGGLGPQALGCLVLLEPLDFESLT 2343

Query: 110  SYRFTVYATDTLM---TTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTP-GSVI 165
             Y  TV A D      +++  V ++V++VND  P F    Y      + +++ TP G+ +
Sbjct: 2344 QYNLTVAAADRGQPPRSSAVPVTVTVLDVNDNPPVFTRASYR-----VAVSEDTPVGAEL 2398

Query: 166  GKVEAADGDKGD----RVTLSLRGPYEKMFSIND-SGHISIV-DLSALNTSTIQLVVVAT 219
              VEA+D D G     R TLS   P   +F +++ SG + +   L     +  QLVV A 
Sbjct: 2399 LHVEASDADPGPHGLVRFTLSSGDP-AGLFELDESSGALRLARPLDCETQARHQLVVQAA 2457

Query: 220  D 220
            D
Sbjct: 2458 D 2458



 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 69/255 (27%), Positives = 120/255 (47%), Gaps = 43/255 (16%)

Query: 14   VVRAIQYDNQDRYALATLIVS--------KAGTS-LRELQFSKNEYSVSALENLPVNYVL 64
            V  A+  ++Q+ Y L  + VS        + GT+ +R    ++N++S      L      
Sbjct: 1053 VRAALDRESQELYTLKVMAVSGSKAESGQQTGTATVRVSILNQNDHS----PRLSEEPTF 1108

Query: 65   LTVTTNKP------------RDL----RVKYWLS--NDYGERFSISRQ-GDISLMQCLDY 105
            L V  N+P            RD     R+ Y L   ++  + F I  Q G+++ +Q LD 
Sbjct: 1109 LAVAENQPPGSSVGRVYASDRDSGPNGRLTYSLRQMSEDSKAFRIHPQTGEVTTLQTLDR 1168

Query: 106  ETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYEL--FLPHIPLAD-L 159
            E + SY+  V   D      + + TV+I+V+++ND  P F          LP I + D +
Sbjct: 1169 ERQSSYQLLVRVQDGGSPPRSATGTVHIAVLDLNDNSPTFLQASGAAGGGLP-IQVPDRV 1227

Query: 160  TPGSVIGKVEAADGDKGDRVTL--SLRGPYEKMFSIN-DSGH-ISIVDLSALNTSTIQLV 215
             PG+++  ++A D D+G+  T+  +L GP  ++FS++  SG  ++   L         L 
Sbjct: 1228 PPGTLVTTLQAKDPDEGENGTILYTLTGPGSELFSLHPHSGELLTAAPLIRAERPHYVLT 1287

Query: 216  VVATDTGNPPRQASV 230
            + A D G+PPR +S+
Sbjct: 1288 LSAHDQGSPPRSSSL 1302



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 46/146 (31%), Positives = 65/146 (44%), Gaps = 7/146 (4%)

Query: 13   LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKP 72
            L V A  + +  R A   L VS A  +     F + EYSV   EN P    LLT+    P
Sbjct: 1394 LTVVASDHGSPPRSATQLLTVSVADVNDEAPAFQQQEYSVLLRENSPPGTSLLTLRATDP 1453

Query: 73   RDLRVKYWLSND--YGERFSISRQ-GDISLMQCLDYETEDSYRFTVYATD---TLMTTSA 126
             DL     ++     GE FS+    G ++ ++ LD E ++    TVYA D     + T  
Sbjct: 1454 -DLGANGQVTYGGISGESFSLDPDTGVLTTLRALDREEQEEINLTVYARDRGSPPLLTHV 1512

Query: 127  TVNISVVNVNDWDPRFRYPQYELFLP 152
            TV ++V + ND  P F      L +P
Sbjct: 1513 TVRVAVEDENDHAPAFGSAHLSLEVP 1538



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 48/149 (32%), Positives = 67/149 (44%), Gaps = 15/149 (10%)

Query: 89   FSISRQGD-ISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQY 147
            FS+ R G  +SL   LD+E  D Y   + A D      A + + V +VND  P F    Y
Sbjct: 2099 FSVGRYGGRVSLTGPLDFEQCDRYHLQLLAHDGPHEGRANLTVLVEDVNDNAPVFSQSLY 2158

Query: 148  EL-FLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIN-DSGHI---- 199
            ++  L H P     PGS I  V A D D G    ++  L  P E  FS++ ++G +    
Sbjct: 2159 QVTLLEHTP-----PGSAILSVSATDRDSGANGHISYHLASPAEG-FSVDPNNGTLFTTA 2212

Query: 200  SIVDLSALNTSTIQLVVVATDTGNPPRQA 228
              V L       + +V+ A D G P R A
Sbjct: 2213 GTVALGHEGLGVVDVVLEARDHGMPGRAA 2241



 Score = 47.8 bits (112), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 44/127 (34%), Positives = 64/127 (50%), Gaps = 13/127 (10%)

Query: 58  LPVNYVLLTVTTNKP---RDLRVKYWLSNDYGER-FSIS-RQGDISLMQCLDYETEDSYR 112
           LP ++V+  VT   P    + +V Y L+     R FSI    G I+    LDYE E   +
Sbjct: 484 LPGSFVV-RVTARDPDQGTNGQVTYSLAPGSHTRWFSIDPTSGIITTAASLDYELEPQPQ 542

Query: 113 FTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVE 169
             V ATD     +T+SATV++++ +VND +P+F+   Y   LP        PG+   +V 
Sbjct: 543 LIVVATDGGLPPLTSSATVSVALQDVNDNEPQFQRTFYNASLPE----GTQPGTCFLQVT 598

Query: 170 AADGDKG 176
           A D D G
Sbjct: 599 ATDADSG 605



 Score = 46.6 bits (109), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 57/219 (26%), Positives = 89/219 (40%), Gaps = 39/219 (17%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDL----RVKYWLSNDYGERFSISRQGDISLM 100
            FS++ Y V+ LE+ P    +L+V+    RD      + Y L++   E FS+         
Sbjct: 2153 FSQSLYQVTLLEHTPPGSAILSVSATD-RDSGANGHISYHLASP-AEGFSVDPNNGTLFT 2210

Query: 101  QC----LDYETEDSYRFTVYATDTLM---TTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
                  L +E        + A D  M      ATV++ + + ND  P F  P Y + +  
Sbjct: 2211 TAGTVALGHEGLGVVDVVLEARDHGMPGRAARATVHVQLQDQNDHAPSFTLPHYRVAV-- 2268

Query: 154  IPLADLTPGSVIGKVEAADGDKGDRVTLSL-----RGPYEKMFSI-------NDSGHISI 201
                DL PGS +  +EA D D G R   ++      G   ++F +        +SG +  
Sbjct: 2269 --TEDLPPGSTLLTLEATDAD-GSRTHATVDYSIVSGNRGRVFQLEPRLAEAGESGGLGP 2325

Query: 202  VDLSAL---------NTSTIQLVVVATDTGNPPRQASVP 231
              L  L         + +   L V A D G PPR ++VP
Sbjct: 2326 QALGCLVLLEPLDFESLTQYNLTVAAADRGQPPRSSAVP 2364



 Score = 46.6 bits (109), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 65/231 (28%), Positives = 100/231 (43%), Gaps = 30/231 (12%)

Query: 13   LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVN------YVLLT 66
            L + A       R A   +IV   G S R  +F +        EN P          + T
Sbjct: 1813 LFIVATDLGRPARSATGVVIVGLQGESERGPRFPRASGEAVLRENAPPGTPIASPKAVHT 1872

Query: 67   VTTNKPRDLRVKYW-LSNDYGERFSIS-RQGDIS--LMQCLDYETEDSYRFTVYATDTLM 122
              +N P    + Y  LS +    FSI    G I+  L + LD+E     R  + A     
Sbjct: 1873 GGSNGP----ITYSILSGNEKGTFSIQPNTGAITVRLAEGLDFEANPRLRLVLQAESGGA 1928

Query: 123  TTSATVNISVVNVNDWDPRFRYPQYELFLPHI-PLADLTPGSVIGKVEAADGDKG--DRV 179
               + + +++ + ND  PRF  P Y  FLP   PL     G ++ +VEA D D+G   ++
Sbjct: 1929 FAFSVLTLTLQDANDNAPRFLQPHYVAFLPESRPLE----GPLL-QVEADDLDQGPSGQI 1983

Query: 180  TLSLRG--PYEKMFSIND-SGHI---SIVDLSALNTSTIQLVVVATDTGNP 224
            + SL    P   +F ++  SG I   +I+D      +  +LV++ATD G+P
Sbjct: 1984 SYSLAASQPARGLFHVDPASGTITTTAILDREIW--AETRLVLMATDRGSP 2032



 Score = 43.9 bits (102), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 58/198 (29%), Positives = 85/198 (42%), Gaps = 21/198 (10%)

Query: 42  ELQFSKNEYSVSALENLPVNYVLLTVTT----NKPRDLRVKYWLSNDYGER----FSI-S 92
           E QF +  Y+ S  E        L VT     + P  L + Y L    G      F I +
Sbjct: 572 EPQFQRTFYNASLPEGTQPGTCFLQVTATDADSGPFGL-LSYSLGAGLGASGSPPFRIDA 630

Query: 93  RQGDISLMQCLDY-ETEDSYRFTVYATDTLMTTSAT-VNISVVNVNDWDPRFRYPQYELF 150
             GD+   Q LD  +   S+ FTV A D     S   V + V + ND  P+F   +Y   
Sbjct: 631 HSGDVCTTQTLDRDQGPSSFDFTVTAVDGGGLKSIVYVKVFVSDENDNPPQFYPREYAAS 690

Query: 151 LPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIND-SGHISIV-DLS 205
           L     A   PG+ + +V A D D+G    LS   L G    +F++++ SG +++   L+
Sbjct: 691 L----SAQSPPGTAVLRVRAHDPDQGPHGRLSYHILAGNSPPLFALDEHSGLLTVAWPLA 746

Query: 206 ALNTSTIQLVVVATDTGN 223
               S +QL + A D G 
Sbjct: 747 RQVNSVVQLEIGAQDGGG 764



 Score = 42.4 bits (98), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 33/105 (31%), Positives = 53/105 (50%), Gaps = 8/105 (7%)

Query: 126 ATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSL 183
           A V + + +VND  P F  P+  + LP        PG++I  + A D D G   RVT +L
Sbjct: 875 ARVRVLLDDVNDNSPAFPAPEDTVLLP----PSTAPGTLIYTLRALDPDSGVNSRVTFNL 930

Query: 184 RGPYEKMFSIND-SGHISIVD-LSALNTSTIQLVVVATDTGNPPR 226
                 +F+++  +GH+ ++  L A      +L + A D G+PPR
Sbjct: 931 LDGGGGVFTVDPTTGHVRLIGPLGAPGGPAYELDLEARDGGSPPR 975



 Score = 40.8 bits (94), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 23/85 (27%), Positives = 44/85 (51%), Gaps = 7/85 (8%)

Query: 95   GDISLMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFL 151
            G+   M+ LD E E +++  + A D     ++ +  V ++V++ ND  P F  P Y + +
Sbjct: 1582 GEFGTMRPLDREVEPAFQLRIEARDGGQPALSATLLVTVTVLDANDHAPAFPVPAYSVEV 1641

Query: 152  PHIPLADLTPGSVIGKVEAADGDKG 176
            P     D   G+++ +++A D D G
Sbjct: 1642 PE----DAPAGTLLLQLQAHDPDAG 1662



 Score = 39.3 bits (90), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 56/213 (26%), Positives = 90/213 (42%), Gaps = 28/213 (13%)

Query: 45  FSKNEYSVSALENL-PVNYVLLTVTTNKPRDLR--VKYWLSNDYGER---FSI-SRQGDI 97
           F+++ Y     E+L P + VL    ++   D    V Y ++    E    FSI +  G +
Sbjct: 252 FNQSRYHAVVSESLAPGSPVLQVYASDADADANGAVTYEINRRQSEGDGPFSIDAHTGLL 311

Query: 98  SLMQCLDYETEDSYRFTVYATDTLMTT---SATVNISVVNVNDWDPRFRYPQYELFL--- 151
            L + LD+E    +   V A D        SA V + V + ND  P        +FL   
Sbjct: 312 RLERPLDFEQRRVHELVVQARDGGAHPELGSAFVTVHVRDANDNQPSMTV----IFLSAD 367

Query: 152 --PHIPLADLTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSINDSGHISIV----- 202
             P +  A   PG ++ ++  +D D GD   V +SL G  E  F+++    +  +     
Sbjct: 368 GSPRVSEA-APPGQLVARISVSDPDDGDFAHVNVSLEG-GEGHFALSTQDSVIYLVCVAR 425

Query: 203 DLSALNTSTIQLVVVATDTGNPPRQASVPAIMH 235
            L         L V ATD+G+PP +A    ++H
Sbjct: 426 QLDREERDAYNLRVTATDSGSPPLRAEAAFVLH 458


>gi|291384509|ref|XP_002708817.1| PREDICTED: dachsous 1 [Oryctolagus cuniculus]
          Length = 3295

 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 61/191 (31%), Positives = 96/191 (50%), Gaps = 21/191 (10%)

Query: 56  ENLPVNYVLLTVTTNKPRDLRVKYW-LSNDYGE-RFSISRQGDISLMQC----LDYETED 109
           E  P   ++  ++ + P D    +  +S + GE  F++S Q  +  + C    LD E  D
Sbjct: 374 EAAPPGQLVARISVSDPDDGDFAHVNVSLEGGEGHFALSTQDSVIYLVCVARRLDREERD 433

Query: 110 SYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLT-PGSVI 165
           +Y   V ATD+    +   A   + V +VND  P F    ++L+ P  PL ++  PGS +
Sbjct: 434 AYNLRVTATDSGSPPLRAEAAFVLHVTDVNDNAPVF---DHQLYRPE-PLPEVALPGSFV 489

Query: 166 GKVEAADGDKG--DRVTLSLR-GPYEKMFSINDSGHISIVDLSALN---TSTIQLVVVAT 219
            +V A D D+G   +VT SL  G + + FSI+ +  I I   ++L+       QL+VVAT
Sbjct: 490 VRVTAQDPDQGTNGQVTYSLAPGAHTRWFSIDPTSGI-ITTAASLDYELEPQPQLIVVAT 548

Query: 220 DTGNPPRQASV 230
           D G PP  +S 
Sbjct: 549 DGGLPPLASSA 559



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/149 (33%), Positives = 67/149 (44%), Gaps = 15/149 (10%)

Query: 89   FSISRQGD-ISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQY 147
            FS+ R G  ISLM  LD+E  DSY   + A D      A + + V +VND  P F    Y
Sbjct: 2319 FSVGRYGGRISLMGPLDFEQRDSYHLQLLAHDGPHEGHANLTVLVEDVNDNTPAFSQSLY 2378

Query: 148  EL-FLPHIPLADLTPGSVIGKVEAADGDKGDR--VTLSLRGPYEKMFSINDSGH-----I 199
            ++  L H P     PGS I  V A D D G    ++  L  P E  FS++ +       +
Sbjct: 2379 QVTLLEHTP-----PGSAILSVSATDRDSGANGLISYHLASPAEG-FSVDPNNGTLFTTV 2432

Query: 200  SIVDLSALNTSTIQLVVVATDTGNPPRQA 228
              V L       + +V+ A D G P R A
Sbjct: 2433 GAVALGYEGPGVVDVVLEARDHGAPGRAA 2461



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 71/252 (28%), Positives = 116/252 (46%), Gaps = 37/252 (14%)

Query: 14   VVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALEN------LPVNYVLLTV 67
            V  A+  + Q+ Y L  + VS +   L + Q       VS L        L      L V
Sbjct: 1053 VRAALDREAQELYTLKVIAVSGSKAELGQ-QTGTATVKVSILNQNDHSPRLSEEPTFLAV 1111

Query: 68   TTNKP------------RDL----RVKYWLS--NDYGERFSISRQ-GDISLMQCLDYETE 108
              N+P            RDL    R+ Y L   ++  + F I  Q G+++ +Q LD E +
Sbjct: 1112 AENQPPGTSVGRILATDRDLGPNGRLTYSLRQLSEDSKAFRIQPQTGEVTTLQTLDREQQ 1171

Query: 109  DSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYEL--FLPHIPLAD-LTPG 162
             SY+  V   D      +T+ TV+I+V+++ND  P F          LP I + D + PG
Sbjct: 1172 SSYQLLVQVQDGGSPPRSTTGTVHIAVLDLNDNSPTFLQASGAAGGGLP-IQIPDRVPPG 1230

Query: 163  SVIGKVEAADGDKGDRVTL--SLRGPYEKMFSIN-DSGH-ISIVDLSALNTSTIQLVVVA 218
            +++  ++A D D+G+  T+  +L GP  ++FS++  SG  ++   L         L + A
Sbjct: 1231 TLVTTLQAKDPDEGENGTILYTLTGPGSELFSLHPHSGELLTAASLIRAERPHYVLTLSA 1290

Query: 219  TDTGNPPRQASV 230
             D G+PPR A++
Sbjct: 1291 HDQGSPPRSATL 1302



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 57/197 (28%), Positives = 85/197 (43%), Gaps = 12/197 (6%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKP---RDLRVKYWLSNDYGERFSIS-RQGDISLM 100
            F    YSV   E+ P   +LL +  + P    + RV Y+L       F +    G++  +
Sbjct: 1852 FPVPAYSVEVPEDAPAGTLLLQLQAHDPDSGANGRVTYYLGAGTAGVFLLEPSSGELRTV 1911

Query: 101  QCLDYETEDSYRFTVYATDTL----MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
              LD E   SY F+V A D      ++T+  V I+V +VND  P F      L LP    
Sbjct: 1912 TTLDREQCPSYAFSVTAVDGAAAGPLSTTVPVTITVRDVNDHAPTFPTSPLRLRLPRPGP 1971

Query: 157  ADLTPGSVIGKVEAADGDKGDRVTL--SLRGPYEKMFSIND-SGHISIVDLS-ALNTSTI 212
            +  TP   +  + A D D G   ++   L G      +++  +G I +     AL     
Sbjct: 1972 SLSTPTLALATLRAEDRDAGANASILYRLAGTPPPGTTVDSYTGEIRVARSPVALGPRDR 2031

Query: 213  QLVVVATDTGNPPRQAS 229
             L +VATD G P R A+
Sbjct: 2032 VLFIVATDLGRPARSAT 2048



 Score = 55.5 bits (132), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 68/255 (26%), Positives = 108/255 (42%), Gaps = 44/255 (17%)

Query: 11   ITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTN 70
            + +V+ A  +    R A AT+ V     +     F+   Y V+  E+LP    LLT+   
Sbjct: 2445 VDVVLEARDHGAPGRAARATVHVQLQDQNDHSPSFTLPHYRVAVTEDLPPGSTLLTLEAT 2504

Query: 71   KPRDLR----VKYW-LSNDYGERFSISRQ---------------GDISLMQCLDYETEDS 110
                 R    V Y  +S + G+ F +  +               G + L++ LD+E+   
Sbjct: 2505 DADGSRTHAAVDYSIISGNRGQVFQLEPRLAEAGEGVGPGSRVLGCLVLLEPLDFESLTQ 2564

Query: 111  YRFTVYATDTLM---TTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGK 167
            Y  TV A D      +++  V +++++VND  P F    Y + +P     D   G+ +  
Sbjct: 2565 YNLTVAAADRGQPPRSSAVPVTVTILDVNDNPPVFTQASYRVAVPE----DTPVGAELLH 2620

Query: 168  VEAADGDKGD----RVTLSLRGPYEKMFSIND-SGHISIVD-LSALNTSTIQLVVVATDT 221
            VEA+D D G     R TLS   P   +F +++ SG + +   L     +  QLVV ATD 
Sbjct: 2621 VEASDADPGPHGLVRFTLSSGDPM-GLFELDESSGTLRLAHPLDCETQARHQLVVQATD- 2678

Query: 222  GNPPRQASVPAIMHF 236
                     PA  HF
Sbjct: 2679 ---------PAGAHF 2684



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 61/211 (28%), Positives = 89/211 (42%), Gaps = 20/211 (9%)

Query: 31   LIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGER-F 89
            ++V   GT     +F    Y V           +L V    P    V Y L+ D     F
Sbjct: 983  VVVQDQGTRGLAPRFDSPTYRVDLPWGTTPGTQVLQVQAQAPDGGPVTYHLAGDGASSPF 1042

Query: 90   SISRQ-GDISLMQCLDYETEDSYRFTVYATDT------LMTTSATVNISVVNVNDWDPRF 142
             +  Q G + +   LD E ++ Y   V A           T +ATV +S++N ND  PR 
Sbjct: 1043 GLEPQSGWLWVRAALDREAQELYTLKVIAVSGSKAELGQQTGTATVKVSILNQNDHSPRL 1102

Query: 143  -RYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYE--KMFSIN-DS 196
               P +     + P     PG+ +G++ A D D G   R+T SLR   E  K F I   +
Sbjct: 1103 SEEPTFLAVAENQP-----PGTSVGRILATDRDLGPNGRLTYSLRQLSEDSKAFRIQPQT 1157

Query: 197  GHISIVD-LSALNTSTIQLVVVATDTGNPPR 226
            G ++ +  L     S+ QL+V   D G+PPR
Sbjct: 1158 GEVTTLQTLDREQQSSYQLLVQVQDGGSPPR 1188



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 60/198 (30%), Positives = 89/198 (44%), Gaps = 21/198 (10%)

Query: 42  ELQFSKNEYSVSALENLPVNYVLLTVTT----NKPRDLRVKYWLSNDYGER----FSI-S 92
           E QF K  Y+ S  E        L VT     + P  L + Y L    G      F I +
Sbjct: 572 EPQFQKTFYNASLPEGTQPGTCFLQVTATDADSGPFGL-LSYSLGAGLGASGSPPFRIDA 630

Query: 93  RQGDISLMQCLDYETEDS-YRFTVYATDTLMTTSAT-VNISVVNVNDWDPRFRYPQYELF 150
           R GD+  ++ LD +   S + FTV A D     S   V + V + ND  P F   +Y + 
Sbjct: 631 RSGDVCTIRTLDRDQGPSTFDFTVTAVDGGGLKSMVYVKVFVSDENDNPPHFYPREYAVS 690

Query: 151 LPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIND-SGHISIV-DLS 205
           L     A  TPG+ + +V A D D+G    LS   L G   ++F++++ +G +++   L+
Sbjct: 691 L----SAQSTPGTAVMRVRAHDPDQGPHGRLSYHILAGNSPQLFALDEQTGLLTVAWPLT 746

Query: 206 ALNTSTIQLVVVATDTGN 223
               S +QL V A D G 
Sbjct: 747 RRANSVVQLEVGAQDGGG 764



 Score = 47.4 bits (111), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 45/149 (30%), Positives = 66/149 (44%), Gaps = 11/149 (7%)

Query: 13   LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKP 72
            L V A  + +  R A   L +S A  +     F + EY+V   EN P    LLT+    P
Sbjct: 1614 LTVVASDHGSPPRSATQLLTISVADVNDEAPAFPQQEYTVLLRENSPPGTSLLTLRATDP 1673

Query: 73   RDLRVKYWLSNDYG----ERFSISRQ-GDISLMQCLDYETEDSYRFTVYATD---TLMTT 124
             DL     ++  YG    E FS+    G ++ ++ LD E ++    TVYA D     + T
Sbjct: 1674 -DLGANGQVT--YGGVSCESFSLDPDTGVLTTLRALDREEQEEISLTVYARDMGSPPLLT 1730

Query: 125  SATVNISVVNVNDWDPRFRYPQYELFLPH 153
              TV ++V + ND  P F      L +P 
Sbjct: 1731 HVTVRVTVEDENDHAPTFGNSHLSLEVPE 1759



 Score = 46.2 bits (108), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 43/127 (33%), Positives = 63/127 (49%), Gaps = 13/127 (10%)

Query: 58  LPVNYVLLTVTTNKP---RDLRVKYWLSNDYGER-FSIS-RQGDISLMQCLDYETEDSYR 112
           LP ++V+  VT   P    + +V Y L+     R FSI    G I+    LDYE E   +
Sbjct: 484 LPGSFVV-RVTAQDPDQGTNGQVTYSLAPGAHTRWFSIDPTSGIITTAASLDYELEPQPQ 542

Query: 113 FTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVE 169
             V ATD     + +SATV++++ +VND +P+F+   Y   LP        PG+   +V 
Sbjct: 543 LIVVATDGGLPPLASSATVSVALQDVNDNEPQFQKTFYNASLPE----GTQPGTCFLQVT 598

Query: 170 AADGDKG 176
           A D D G
Sbjct: 599 ATDADSG 605



 Score = 43.9 bits (102), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 49/185 (26%), Positives = 77/185 (41%), Gaps = 21/185 (11%)

Query: 26   YALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLT---VTTNKPRDLRVKYWL- 81
            +ALA + V     +     F  N  S S  EN P   ++ T   +  +     ++ Y L 
Sbjct: 2684 FALAPVTVEVQDVNDHGPAFPLNLLSTSLAENQPAGTLVTTLHAIDGDAGAFGKLHYSLL 2743

Query: 82   ----SNDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDTL-MTTSATVNISVVNV 135
                  D  E F++ S  G++      DYE   S+R  V A D   ++ S TV++ V   
Sbjct: 2744 EAGPGPDGREAFALNSSTGELRARMPFDYEHTGSFRLLVGAADAGNLSASVTVSVLVTGE 2803

Query: 136  NDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDR----VTLSLRGPYEKMF 191
            +++DP F  P +   +P         G  +G V+A D D G       +L+   PY   F
Sbjct: 2804 DEYDPVFLAPAFHFQVPE----GARRGHSLGHVQATDEDGGADGLVLYSLATSSPY---F 2856

Query: 192  SINDS 196
             IN +
Sbjct: 2857 GINQT 2861



 Score = 43.9 bits (102), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 57/225 (25%), Positives = 87/225 (38%), Gaps = 51/225 (22%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDLR----VKYWLSNDYGERFSISRQGDISLM 100
            FS++ Y V+ LE+ P    +L+V+    RD      + Y L++   E FS+         
Sbjct: 2373 FSQSLYQVTLLEHTPPGSAILSVSATD-RDSGANGLISYHLASP-AEGFSVDPNNGTLFT 2430

Query: 101  Q----CLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
                  L YE        + A D         ATV++ + + ND  P F  P Y + +  
Sbjct: 2431 TVGAVALGYEGPGVVDVVLEARDHGAPGRAARATVHVQLQDQNDHSPSFTLPHYRVAV-- 2488

Query: 154  IPLADLTPGSVIGKVEAAD----------------GDKGDRVTLSLR--------GPYEK 189
                DL PGS +  +EA D                G++G    L  R        GP  +
Sbjct: 2489 --TEDLPPGSTLLTLEATDADGSRTHAAVDYSIISGNRGQVFQLEPRLAEAGEGVGPGSR 2546

Query: 190  MFSINDSGHISIVDLSALNTSTI---QLVVVATDTGNPPRQASVP 231
            +          +V L  L+  ++    L V A D G PPR ++VP
Sbjct: 2547 VLGC-------LVLLEPLDFESLTQYNLTVAAADRGQPPRSSAVP 2584



 Score = 43.5 bits (101), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 60/230 (26%), Positives = 97/230 (42%), Gaps = 28/230 (12%)

Query: 13   LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVT---- 68
            L + A       R A   +IV   G S R  +F +     +  EN P    + +      
Sbjct: 2033 LFIVATDLGRPARSATGVVIVGLQGESERGPRFPRTSSEATLRENAPPGTPVASPKAVHA 2092

Query: 69   --TNKPRDLRVKYW-LSNDYGERFSIS-RQGDISL--MQCLDYETEDSYRFTVYATDTLM 122
              +N P    + Y  LS +    FSI    G I++   + LD+E     R  + A     
Sbjct: 2093 GGSNGP----ITYSILSGNEKGTFSIQPSTGAITVRSAEGLDFEASPRLRLVLQAESGGA 2148

Query: 123  TTSATVNISVVNVNDWDPRFRYPQYELFLPHI-PLADLTPGSVIGKVEAADGDKGD---- 177
               + + +++ + ND  PRF  P Y  FLP   PL     G ++ +VEA D D+G     
Sbjct: 2149 FAFSVLTLTLQDANDNAPRFLRPHYVAFLPESRPLE----GPLL-QVEADDLDQGSGGQI 2203

Query: 178  RVTLSLRGPYEKMFSINDSGHISIVDLSALNT---STIQLVVVATDTGNP 224
              +L+   P   +F + D    +I   + L+    +  +LV++ATD G+P
Sbjct: 2204 SYSLAASQPARGLFQV-DPATGTITTTAILDREIWAETRLVLMATDRGSP 2252



 Score = 41.6 bits (96), Expect = 0.70,   Method: Compositional matrix adjust.
 Identities = 29/107 (27%), Positives = 52/107 (48%), Gaps = 9/107 (8%)

Query: 95   GDISLMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFL 151
            G+   M+ LD E E +++  + A D     ++ +  V ++V++ ND  P F  P Y + +
Sbjct: 1802 GEFGTMRPLDREVEPAFQLRIEARDGGQPALSATLLVTVTVLDANDHAPAFPVPAYSVEV 1861

Query: 152  PHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDS 196
            P     D   G+++ +++A D D G   RVT  L      +F +  S
Sbjct: 1862 PE----DAPAGTLLLQLQAHDPDSGANGRVTYYLGAGTAGVFLLEPS 1904



 Score = 40.0 bits (92), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 32/105 (30%), Positives = 52/105 (49%), Gaps = 8/105 (7%)

Query: 126 ATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSL 183
           A V + + +VND  P F  P+  + LP     +  PG+ I  + A D D G   RVT +L
Sbjct: 875 ARVRVLLDDVNDNSPAFPAPEDTVLLP----PNTAPGTPIYTLRALDPDSGVNSRVTFTL 930

Query: 184 RGPYEKMFSIND-SGHISIVD-LSALNTSTIQLVVVATDTGNPPR 226
                  F+++  +GH+ ++  L +      +L + A D G+PPR
Sbjct: 931 LAGGGGAFTVDPITGHVRLMGPLGSPGGPAHELELEARDGGSPPR 975



 Score = 40.0 bits (92), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 66/148 (44%), Gaps = 15/148 (10%)

Query: 92   SRQGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVN------ISVVNVNDWDPRFRYP 145
            +R G +S  + LD ET  +    V ATD     +          + V + ND  P F  P
Sbjct: 1487 ARTGALSAPRGLDRETTPALLLLVEATDRPANATRRRAARVSARVFVTDENDNAPVFTSP 1546

Query: 146  QYELFLPHIPLADLTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSIN-DSGHISIV 202
               + LP     D  PG     V A D D G+  RV+  L    +  F ++ ++G +S+V
Sbjct: 1547 S-RVRLPE----DQRPGPAALHVVARDPDLGEAARVSYRLAAGGDSHFRLHPNTGALSVV 1601

Query: 203  -DLSALNTSTIQLVVVATDTGNPPRQAS 229
              L     +   L VVA+D G+PPR A+
Sbjct: 1602 RPLDREQRAEHVLTVVASDHGSPPRSAT 1629



 Score = 38.5 bits (88), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 45/163 (27%), Positives = 70/163 (42%), Gaps = 22/163 (13%)

Query: 89  FSI-SRQGDISLMQCLDYETEDSYRFTVYATDTLMTT---SATVNISVVNVNDWDPRFRY 144
           FSI +  G + L + LD+E    +   V A D        SA V + V + ND  P    
Sbjct: 302 FSIDAHTGLLRLERPLDFEQRRVHELVVQARDGGAHPELGSAFVTVHVRDANDNQPSMTV 361

Query: 145 PQYELFL-----PHIPLADLTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSINDSG 197
               +FL     P +  A   PG ++ ++  +D D GD   V +SL G  E  F+++   
Sbjct: 362 ----IFLSADGSPRVSEA-APPGQLVARISVSDPDDGDFAHVNVSLEG-GEGHFALSTQD 415

Query: 198 HISIV-----DLSALNTSTIQLVVVATDTGNPPRQASVPAIMH 235
            +  +      L         L V ATD+G+PP +A    ++H
Sbjct: 416 SVIYLVCVARRLDREERDAYNLRVTATDSGSPPLRAEAAFVLH 458


>gi|109078984|ref|XP_001087882.1| PREDICTED: protocadherin gamma-A2-like [Macaca mulatta]
          Length = 823

 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 57/193 (29%), Positives = 88/193 (45%), Gaps = 17/193 (8%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVT---TNKPRDLRVKYWLSNDYGERFSI----SRQGDI 97
           F++ EY +S  EN PV+  +LTVT    ++  + +V Y+L    GE   +    S  GD+
Sbjct: 242 FTQPEYRISVPENTPVDTRILTVTATDADEGYNAQVAYFLEKSPGETSEVFELKSTSGDL 301

Query: 98  SLMQCLDYETEDSYRFTVYATDTL-MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
           ++++ LDYE    +   + A D   + T   V I+V++VND  P F    Y         
Sbjct: 302 TIIKDLDYEDATFHEIDIEAQDGPGLLTRTKVIITVLDVNDNAPEF----YITSATSSVS 357

Query: 157 ADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDS--GHISIVDLSALNT---ST 211
            D  PG+VIG     D D G    ++   P    F +  S   +  +V   AL+    S 
Sbjct: 358 EDSPPGTVIGLFNVHDRDSGQNAFITCSLPENLPFKLEKSVDNYYRLVTTRALDREQFSF 417

Query: 212 IQLVVVATDTGNP 224
             + + A D GNP
Sbjct: 418 YNITLTAKDGGNP 430



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 72/285 (25%), Positives = 122/285 (42%), Gaps = 48/285 (16%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPR---DLRVKYWLSNDYGERFSISR-------Q 94
           FS+  YS    EN P    + +VT + P    +  V Y  + D  +   +S         
Sbjct: 452 FSRTSYSAYIPENNPRGASVFSVTAHDPDSNDNAHVTYSFAEDTVQGAPLSSYISINSDT 511

Query: 95  GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFL 151
           G +  ++  DYE     +  V A D+    ++++ +V++ V++ ND  P   YP     +
Sbjct: 512 GVLYALRSFDYEQFRDLQLWVMARDSGNPPLSSNVSVSLFVLDQNDNAPEILYPA----I 567

Query: 152 P-----HIPLA--DLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-DSGHI- 199
           P      + LA     PG ++ KV A D D G    LS   L+     +F++   +G + 
Sbjct: 568 PTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYHLLKASEPGLFAVGLHTGEVR 627

Query: 200 ---SIVDLSALNTSTIQLVVVATDTGNPPRQASVPAIMHFPEAIVQ--------QASSKL 248
              +++D  AL  S   LVV   D G PP  A+V   +   + I          + S+K 
Sbjct: 628 TARALLDRDALKQS---LVVAVQDHGQPPLSATVTLTVAVADRIPDLLADLGSLEPSAKP 684

Query: 249 NSGTSSTVLIILGVV--LIVLGFVIILLILYI---HKNKHTKNNG 288
           N    +  L++       + L FVI+LL L +   HK++  + +G
Sbjct: 685 NDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLRRWHKSRLMQASG 729



 Score = 41.2 bits (95), Expect = 0.93,   Method: Compositional matrix adjust.
 Identities = 50/177 (28%), Positives = 74/177 (41%), Gaps = 25/177 (14%)

Query: 67  VTTNKPRDLRVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDT---LMT 123
           +T + P +L  K   S D   R   +R         LD E    Y  T+ A D     ++
Sbjct: 382 ITCSLPENLPFKLEKSVDNYYRLVTTR--------ALDREQFSFYNITLTAKDGGNPSLS 433

Query: 124 TSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGD--RVTL 181
           T A V + V ++ND  P F    Y  ++P     +   G+ +  V A D D  D   VT 
Sbjct: 434 TDAHVLLQVADINDNAPTFSRTSYSAYIPE----NNPRGASVFSVTAHDPDSNDNAHVTY 489

Query: 182 SLR------GPYEKMFSIN-DSGHI-SIVDLSALNTSTIQLVVVATDTGNPPRQASV 230
           S         P     SIN D+G + ++          +QL V+A D+GNPP  ++V
Sbjct: 490 SFAEDTVQGAPLSSYISINSDTGVLYALRSFDYEQFRDLQLWVMARDSGNPPLSSNV 546


>gi|354475386|ref|XP_003499910.1| PREDICTED: protocadherin Fat 3-like [Cricetulus griseus]
          Length = 4555

 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 71/233 (30%), Positives = 106/233 (45%), Gaps = 23/233 (9%)

Query: 13   LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKP 72
            L+ RA   D   R+  A +++     +     FS N Y+    EN     +L  V    P
Sbjct: 3100 LIARAT--DGGGRFCHANVLLLLEDVNDNPPVFSSNHYTACVYENTATKALLTRVQAMDP 3157

Query: 73   R---DLRVKYWLSNDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATD----TLMTT 124
                + +V Y L +     FSI S  G I L + LD E + SY  +V ATD      +++
Sbjct: 3158 DVGINRKVVYSLEDSASGVFSIDSSSGVIILERPLDREQQSSYNISVRATDQSPRQSLSS 3217

Query: 125  SATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGD--RVTLS 182
             A+V I+V+++ND  P F    Y + +P     D + G+ +  V A   D G    +T  
Sbjct: 3218 LASVTITVLDINDNPPVFERRDYLVTVPE----DTSLGTQVLSVFATSKDIGTNAEITYL 3273

Query: 183  LR-GPYEKMFSIN-DSGHISIVDLSALNTSTIQ---LVVVATDTGNPPRQASV 230
            +R G  +  F IN  +G IS+  L AL+  T +   LVV A D G P   A+ 
Sbjct: 3274 IRSGNEQGKFRINPKTGGISV--LEALDYETCKRFYLVVEAKDGGTPALSAAA 3324



 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 68/204 (33%), Positives = 94/204 (46%), Gaps = 25/204 (12%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDL----RVKYWLSNDYGERFSISR-QGDISL 99
            F    YSV  LE+LPV  V+  + T  P DL    +V+Y L NDY  RF I +  G I L
Sbjct: 935  FIPTSYSVKVLEDLPVGTVIAWLETQDP-DLGLGGQVRYSLINDYNGRFEIDKASGAIRL 993

Query: 100  MQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIP---- 155
             + LDYE +  Y  TV A D          +S+ +V+  +         L +P+ P    
Sbjct: 994  SKELDYEKQQFYNLTVRAKDKGRP------VSLSSVSFVEVEVVDVNENLHMPYFPDFAV 1047

Query: 156  LADLTPGSVIG----KVEAADGDKG--DRVTLSLR-GPYEKMFSIND-SGHISIVD-LSA 206
            +  +   S IG    +V A D D G    +  S+R G     FSI+D SG I+  D L  
Sbjct: 1048 VGSVKENSRIGTSVLQVTAHDEDSGRDGEIQYSIRDGSGLGRFSIDDESGVITAADILDR 1107

Query: 207  LNTSTIQLVVVATDTGNPPRQASV 230
              T +  L V ATD G  P  +++
Sbjct: 1108 ETTGSYWLTVYATDRGVVPLYSTI 1131



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 62/195 (31%), Positives = 93/195 (47%), Gaps = 16/195 (8%)

Query: 43  LQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLS-NDYGERFSIS-RQGDISLM 100
           ++F K+ Y VS  E  P   VL+ +    P  L V+Y LS     E F I+ R G I   
Sbjct: 373 VRFEKDVYEVSISEFSPPG-VLVAIVKVNPEPLDVEYKLSPGKDAEYFKINPRSGLIVTA 431

Query: 101 QCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFL-PHIPLADL 159
           Q L+   ++ Y+  V  T+      A V I + + ND  P F+   YE F+   IP+   
Sbjct: 432 QPLNIVKKEVYKLEV--TNKEGDVKAQVTIGIEDANDHTPEFQQTVYETFVNESIPV--- 486

Query: 160 TPGSVIGKVEAADGDKGDR--VTLSLRGPYEKMFSIND-SGHISIVDLSALNTS--TIQL 214
             G+ +  V A+D DKG+   +T S+       F+IN  +G IS  +     +S  T + 
Sbjct: 487 --GTNVLTVSASDKDKGENGYITYSIASLNLLPFAINQFTGVISTTEELDFESSPETYRF 544

Query: 215 VVVATDTGNPPRQAS 229
           +V A+D G+P R  S
Sbjct: 545 IVRASDWGSPYRHES 559



 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 65/214 (30%), Positives = 97/214 (45%), Gaps = 28/214 (13%)

Query: 53   SALENLPVNYVLLTVTTNKP---RDLRVKYWLSNDYG-ERFSISRQ-GDISLMQCLDYET 107
            S  EN  +   +L VT +     RD  ++Y + +  G  RFSI  + G I+    LD ET
Sbjct: 1050 SVKENSRIGTSVLQVTAHDEDSGRDGEIQYSIRDGSGLGRFSIDDESGVITAADILDRET 1109

Query: 108  EDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSV 164
              SY  TVYATD     + ++  V I V +VND  P    P Y   +      D+   SV
Sbjct: 1110 TGSYWLTVYATDRGVVPLYSTIEVYIEVEDVNDNAPLTSEPIYYPVVMENSPKDV---SV 1166

Query: 165  IGKVEAADGDKGDRVTLSLR---GPYEKMFSIN-DSGHISIVD--LSALNTSTIQLVVVA 218
            I +++A D D G    L+ R   G  +  F+IN  +G I+     L     +   L V  
Sbjct: 1167 I-QIQAEDPDSGSNEKLTYRITSGNPQNFFAINIKTGLITTTSRKLDREQQAEHFLEVTV 1225

Query: 219  TDTGNPPRQASVPAIM----------HFPEAIVQ 242
            TD G+ P+Q+++  ++           FPE + Q
Sbjct: 1226 TDGGSSPKQSTIWVVVQVLDENDNKPQFPEKVYQ 1259



 Score = 44.7 bits (104), Expect = 0.076,   Method: Compositional matrix adjust.
 Identities = 69/231 (29%), Positives = 105/231 (45%), Gaps = 27/231 (11%)

Query: 27   ALATLIVSKAGTSLRELQFSKNEYSVSALEN-LPVNYVLLTVTTNKPRDLRVKYWLSNDY 85
            A+ T++V +A  S   L F+++ YS S  EN   +  V +        +  +KY + N  
Sbjct: 1965 AMVTIMVKEAMDS--GLHFTQSFYSTSISENSTNITKVAIVNAVGNRLNEPLKYSILNP- 2021

Query: 86   GERFSI-SRQGDISLMQC-LDYETEDSYRFTVYAT---DTLMTTSATVNISVVNVNDWDP 140
            G +F I S  G I       D E ++ Y   V A+   D L      V +++ +VND  P
Sbjct: 2022 GNKFKIKSTSGVIQTTGVPFDREEQELYELVVEASRELDHLRVARVVVRVNIEDVNDNSP 2081

Query: 141  RFRYPQYELFLPHIPLA--DLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIN-D 195
             F      + LP+      D  PG++I +V A D DKG    VT  L+  Y   F IN +
Sbjct: 2082 VF------VGLPYYAAVQVDAEPGTLIYRVTAIDKDKGANGEVTYILQDDY-GHFEINPN 2134

Query: 196  SGHISIVDLSALNTSTIQ--LVVVATDTGNPPRQASVPAIMHFPEAIVQQA 244
            SG++ + +    + S I   + ++A D GNP    SV      P  IV +A
Sbjct: 2135 SGNVILKEAFNSDLSNIDYGVTILAKDGGNPSLSKSV----ELPITIVNKA 2181



 Score = 44.3 bits (103), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 41/132 (31%), Positives = 58/132 (43%), Gaps = 8/132 (6%)

Query: 103  LDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPG 162
            LD E +D Y   + A+D L  T A V ++V +VND  P      Y   LP     D+   
Sbjct: 2989 LDREEQDVYFLNITASDGLFVTQAMVEVTVSDVNDNSPICDQVAYSASLPE----DIPSN 3044

Query: 163  SVIGKVEAADGDKGDR--VTLSLRGPYEKMFSIN-DSGHI-SIVDLSALNTSTIQLVVVA 218
             +I KV A D D G    +  SL G     F ++ +SG + ++  L         L+  A
Sbjct: 3045 KIILKVSAKDADIGSNGDIRYSLYGSGNTEFFLDPESGELKTLALLDRERVPVYNLIARA 3104

Query: 219  TDTGNPPRQASV 230
            TD G     A+V
Sbjct: 3105 TDGGGRFCHANV 3116



 Score = 42.0 bits (97), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 40/143 (27%), Positives = 70/143 (48%), Gaps = 17/143 (11%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYG-----ERFSI-SRQG 95
            F  + Y    +E +PV   L  V     +   + +V Y L +D       E F I S  G
Sbjct: 2813 FETSSYETIIMEGMPVGTKLAQVRAIDMDWGANGQVTYSLHSDSHLEKVMEAFDIDSNTG 2872

Query: 96   DISLMQCLDYETEDSYRFTVYATDT----LMTTSATVNISVVNVNDWDPRFRYPQYELFL 151
             IS ++ LD+ET+ ++ F+V A+D      +++ A V++ V ++ND  P F    +E++ 
Sbjct: 2873 WISTLKDLDHETDPAFSFSVVASDLGEAFSLSSMALVSVKVTDINDNAPVF---AHEVYR 2929

Query: 152  PHIPLADLTPGSVIGKVEAADGD 174
             ++  +D  PG V+  +   D D
Sbjct: 2930 GNVKESD-PPGEVVAVLSTLDKD 2951



 Score = 41.6 bits (96), Expect = 0.69,   Method: Compositional matrix adjust.
 Identities = 54/203 (26%), Positives = 86/203 (42%), Gaps = 22/203 (10%)

Query: 44   QFSKNEYSVSALEN-LPVNYVLLTVTTNKPRDLRVKYWLSNDYG----ERFSIS-RQGDI 97
            +FS+  Y V+  E+ LP   +L    T++    ++ Y + +        +F +    G +
Sbjct: 1458 EFSQPHYDVTISEDVLPDTEILQIEATDRDEKHKLSYTIHSSIDTMSMRKFRMDPSTGVL 1517

Query: 98   SLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHI 154
               + LD+E +D +   +   D         A V ++V + ND  P F  P YE  +   
Sbjct: 1518 YTAERLDHEAQDKHILNIMVRDQEFPYRRNLARVIVNVEDANDHSPYFTSPLYEASV--- 1574

Query: 155  PLADLTPGSVIGKVEAADGDKGDRVTLSLR---GPYEKMFSINDS-GHISIV---DLSAL 207
                   GSV+ +V A D DKG+   L      G     F I    G I+I    D++A+
Sbjct: 1575 -FESAALGSVVLQVTALDKDKGENAELIYSIEAGNTGNTFKIEPVLGIITISKEPDMTAM 1633

Query: 208  NTSTIQLVVVATDTGNPPRQASV 230
                  L V ATD G+PP  A+ 
Sbjct: 1634 --GQFVLSVKATDQGSPPMSATA 1654



 Score = 41.2 bits (95), Expect = 0.86,   Method: Compositional matrix adjust.
 Identities = 34/112 (30%), Positives = 60/112 (53%), Gaps = 10/112 (8%)

Query: 45   FSKNEYSVSALENLPVNYVLLTV-TTNKP--RDLRVKYWL--SNDYGERFSIS-RQGDIS 98
            F + +Y V+  E+  +   +L+V  T+K    +  + Y +   N+ G +F I+ + G IS
Sbjct: 3235 FERRDYLVTVPEDTSLGTQVLSVFATSKDIGTNAEITYLIRSGNEQG-KFRINPKTGGIS 3293

Query: 99   LMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQY 147
            +++ LDYET   +   V A D     ++ +AT++I + NVND  P+F    Y
Sbjct: 3294 VLEALDYETCKRFYLVVEAKDGGTPALSAAATISIDLTNVNDNPPQFSQDVY 3345



 Score = 40.4 bits (93), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 56/202 (27%), Positives = 95/202 (47%), Gaps = 34/202 (16%)

Query: 45   FSKNEYSVSALENLPVNYVL--LTVTTNKPRDLRVKYWLSNDYGER--------FSISRQ 94
            F++++YS +  E+  +   +  L +  N+     V++ + N  GER        F I ++
Sbjct: 2707 FTQSQYSFTIAEDTAIGSTVDTLRILPNQ----SVRFSMVN--GERPENNKEGVFIIEQE 2760

Query: 95   -GDISLMQCLDYETEDSYRFTVYATDTL----MTTSATVNISVVNVNDWDPRFRYPQYEL 149
             G I L + LD+E   ++ F V AT  L    +  +  V++ V+++ND  P F    YE 
Sbjct: 2761 TGAIKLDKRLDHEVSPAFHFKVAATIPLDKVDIVFTVDVDVKVLDLNDNKPVFETSSYET 2820

Query: 150  FLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGP--YEKM---FSIN-DSGHISI 201
             +    +  +  G+ + +V A D D G   +VT SL      EK+   F I+ ++G IS 
Sbjct: 2821 II----MEGMPVGTKLAQVRAIDMDWGANGQVTYSLHSDSHLEKVMEAFDIDSNTGWIST 2876

Query: 202  V-DLSALNTSTIQLVVVATDTG 222
            + DL           VVA+D G
Sbjct: 2877 LKDLDHETDPAFSFSVVASDLG 2898



 Score = 40.4 bits (93), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 26/96 (27%), Positives = 45/96 (46%), Gaps = 4/96 (4%)

Query: 95   GDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHI 154
            G I + + LD E    Y  +V  TD        V I V++ ND  P F  P Y++ +   
Sbjct: 1412 GTIVIAKPLDAEQRSVYNMSVEVTDGTNVAVTQVFIKVLDNNDNGPEFSQPHYDVTISE- 1470

Query: 155  PLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKM 190
               D+ P + I ++EA D D+  +++ ++    + M
Sbjct: 1471 ---DVLPDTEILQIEATDRDEKHKLSYTIHSSIDTM 1503



 Score = 39.7 bits (91), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 54/229 (23%), Positives = 98/229 (42%), Gaps = 11/229 (4%)

Query: 13   LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKP 72
            L V+A    +    A A + VS + +     +F+  +Y     EN+ +   ++ ++    
Sbjct: 1638 LSVKATDQGSPPMSATAIVRVSISMSDNSHPKFTHKDYQAEVNENVDIGTSVILISAISQ 1697

Query: 73   RDLRVKYWLSNDYGERFSIS-RQGDISLMQCLDYETEDSYRFTVYATDTL-MTTSATVNI 130
              L  +    N  G  F+I+   G I+  + LDYE   +Y+  + AT+   M ++ATV+I
Sbjct: 1698 STLIYEVKDGNING-VFTINPYSGVITTRRALDYEQTSAYQLIIQATNMAGMASNATVSI 1756

Query: 131  SVVNVNDWDPRFRYPQYELFLPHIP-----LADLTPGSVIGKVEAADGDKGDRVTLSLRG 185
             +V+ ND  P F   QY   L         ++ L    ++ +   AD ++   +   +  
Sbjct: 1757 QIVDENDNPPVFLSSQYSGSLSEAAPINSIVSSLDNSPLVIRATDADSNQNALLVYQIVE 1816

Query: 186  PYEKMFSINDSGHISIVDLSALNTSTI---QLVVVATDTGNPPRQASVP 231
               K F   DS   +I  +++L+   I      V   D+G+P   A  P
Sbjct: 1817 STAKKFFTVDSSTGAIRTIASLDHEAIAHFHFHVHVRDSGSPQLTAESP 1865



 Score = 39.7 bits (91), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 51/189 (26%), Positives = 81/189 (42%), Gaps = 17/189 (8%)

Query: 50   YSVSALENLPVNYVLLTVTTNKPR-----DLRVKYWLSNDYGERFSISRQGDISLMQCLD 104
            YS S  E++P N ++L V+          D+R   + S +  E F     G++  +  LD
Sbjct: 3033 YSASLPEDIPSNKIILKVSAKDADIGSNGDIRYSLYGSGNT-EFFLDPESGELKTLALLD 3091

Query: 105  YETEDSYRFTVYATD-TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGS 163
             E    Y     ATD       A V + + +VND  P F    Y   +      +    +
Sbjct: 3092 RERVPVYNLIARATDGGGRFCHANVLLLLEDVNDNPPVFSSNHYTACV----YENTATKA 3147

Query: 164  VIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDSGHISIVD--LSALNTSTIQLVVVAT 219
            ++ +V+A D D G   +V  SL      +FSI+ S  + I++  L     S+  + V AT
Sbjct: 3148 LLTRVQAMDPDVGINRKVVYSLEDSASGVFSIDSSSGVIILERPLDREQQSSYNISVRAT 3207

Query: 220  DTGNPPRQA 228
            D    PRQ+
Sbjct: 3208 DQS--PRQS 3214



 Score = 38.5 bits (88), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 24/73 (32%), Positives = 39/73 (53%), Gaps = 3/73 (4%)

Query: 148  ELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSGHISIVDLSAL 207
            E+F+  + + D  PG VIGK+ A D D  D +T +L+   + +F +N S    I+ L  L
Sbjct: 3554 EIFI--VTMEDDFPGGVIGKIHATDQDMYDVLTFALKSEQKSLFKVN-SHDGKIIALGGL 3610

Query: 208  NTSTIQLVVVATD 220
            ++    L V  +D
Sbjct: 3611 DSGKYVLNVSVSD 3623


>gi|348543886|ref|XP_003459413.1| PREDICTED: protocadherin Fat 3-like [Oreochromis niloticus]
          Length = 4593

 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 48/124 (38%), Positives = 63/124 (50%), Gaps = 8/124 (6%)

Query: 103  LDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPG 162
            LD E  + Y   V A+D L  + ATV ++VV+ ND  P      Y  ++P     DL   
Sbjct: 3003 LDREECNLYNINVTASDGLFVSQATVEVTVVDTNDNSPICDKVMYTAYIPE----DLPAN 3058

Query: 163  SVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIN-DSGHI-SIVDLSALNTSTIQLVVVA 218
            SV+ +V A D D G    +  SL GP  + F+I+ DSG I S V L    T + QLV  A
Sbjct: 3059 SVLLRVGATDADMGISGWIQYSLHGPGSQDFNIDPDSGEIKSSVPLDREMTPSYQLVAQA 3118

Query: 219  TDTG 222
            TD G
Sbjct: 3119 TDGG 3122



 Score = 55.1 bits (131), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 69/214 (32%), Positives = 98/214 (45%), Gaps = 31/214 (14%)

Query: 56   ENLPVNYVLLTVTTNKP---RDLRVKYWLSNDYG-ERFSISRQ-GDISLMQCLDYETEDS 110
            EN  +   LL VT N     RD  V+Y + +  G  RF+I  + G I     LD E++DS
Sbjct: 1055 ENARIGTTLLQVTANDDDAGRDGEVQYSIRDGSGLGRFAIDEETGVIYTTDMLDRESKDS 1114

Query: 111  YRFTVYATDTLMT---TSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGK 167
            Y  TVYATD  +    TS  V I V +VND  P    P Y   +P     D+   SVI +
Sbjct: 1115 YWLTVYATDHGVVPQFTSIDVFIQVEDVNDNAPLTSEPLYRTSVPENSPRDV---SVI-Q 1170

Query: 168  VEAADGDK-----GDRVTLS-LRGPYEKMFSIN-DSGHISIVD--LSALNTSTIQLVVVA 218
            +EA D D       +R+    + G  +  F+IN  +G I+     L     +   L V+ 
Sbjct: 1171 IEAQDPDATLSTTAERLNYRIISGNPQNFFTINTRTGLITTTSRKLDREQQTEHILEVLV 1230

Query: 219  TDTGNPPRQASVPAIMH----------FPEAIVQ 242
            +D G  P+Q++V  I+           FPE + Q
Sbjct: 1231 SDGGPNPKQSTVWVIVQVLDENDNKPIFPEKVYQ 1264



 Score = 46.2 bits (108), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 60/199 (30%), Positives = 90/199 (45%), Gaps = 25/199 (12%)

Query: 50   YSVSALENLPVNYVLLTVTTNKPRDL----RVKYWLSNDYGERFSISR-QGDISLMQCLD 104
            Y    LE+LP+  V+  + T  P DL    +V+Y L++DY   F + R  G I L + LD
Sbjct: 942  YRTRVLEDLPIGTVVAWLETLDP-DLGLGGQVRYSLASDYNGWFEVDRANGVIRLTKELD 1000

Query: 105  YETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTP--- 161
            YET+  Y  TV A D          +S+++V   +         L+ P+     LT    
Sbjct: 1001 YETQQFYNLTVKAKDKGRP------VSLLSVTFVEVEVVDVNENLYAPYFSDFALTGLVK 1054

Query: 162  -----GSVIGKVEAADGDKG--DRVTLSLR-GPYEKMFSIN-DSGHISIVD-LSALNTST 211
                 G+ + +V A D D G    V  S+R G     F+I+ ++G I   D L   +  +
Sbjct: 1055 ENARIGTTLLQVTANDDDAGRDGEVQYSIRDGSGLGRFAIDEETGVIYTTDMLDRESKDS 1114

Query: 212  IQLVVVATDTGNPPRQASV 230
              L V ATD G  P+  S+
Sbjct: 1115 YWLTVYATDHGVVPQFTSI 1133



 Score = 46.2 bits (108), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 63/239 (26%), Positives = 104/239 (43%), Gaps = 31/239 (12%)

Query: 11   ITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTN 70
            ++  V+A+   N  R++L ++ +           FS+  Y  +  EN P+  V+ TV  N
Sbjct: 2678 LSFFVKAVDGGNPVRHSLVSVYIHVLSPETFIPSFSQYHYLFNTPENTPIGSVIGTVHLN 2737

Query: 71   KPRD---LRVKYWLSN-DYGER-----FSISRQ-GDISLMQCLDYETEDSYRFTVYATDT 120
             P +   L   + L N + GE      F + +  G I L + LDYE    Y F V AT  
Sbjct: 2738 TPLEFTSLSTTFALVNGEAGENNQDGVFVVEKHTGVIKLDKPLDYEVIKGYYFKVTATAQ 2797

Query: 121  LM----TTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG 176
                   +   V + V+++ND  P F    Y+  +    +  +  G+ I +V+A D D G
Sbjct: 2798 QAKLDSVSCVEVEVKVLDLNDNKPAFEANSYDTTI----MEGMPVGTRIIQVQARDPDSG 2853

Query: 177  --DRVTLSLRGPYE---------KMFSIN-DSGHISI-VDLSALNTSTIQLVVVATDTG 222
               +VT +L    +           FSI+ ++G I+   DL    + +    VVA+D G
Sbjct: 2854 ANGQVTYTLGSLIQLKEDSDTLVSTFSIDSNTGWITTRKDLDHETSPSYTFTVVASDLG 2912



 Score = 45.8 bits (107), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 48/90 (53%), Gaps = 4/90 (4%)

Query: 95   GDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHI 154
            G I + + LD E    Y  TV ATD   T    ++I+V++ ND  P F  P Y++ +   
Sbjct: 1417 GTIIIAKPLDAEQCSFYNMTVQATDGTSTAHTQIHITVMDNNDNAPIFFQPTYDVIVSE- 1475

Query: 155  PLADLTPGSVIGKVEAADGDKGDRVTLSLR 184
               D  P + + +V+A+D DK  ++T SL+
Sbjct: 1476 ---DTPPDTKVVQVQASDRDKHHQLTYSLQ 1502



 Score = 42.7 bits (99), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 45/163 (27%), Positives = 66/163 (40%), Gaps = 26/163 (15%)

Query: 83   NDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWD 139
            N++G+       G I + Q LDYET   Y  TV A D     ++   TVNI + +VND  
Sbjct: 3292 NEHGKFHIHPLTGAILVAQPLDYETCRDYFLTVEARDGGTPSLSAITTVNIDLTDVNDNP 3351

Query: 140  PRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGD------------KGDRVTLSLRGPY 187
            P F +  Y   +      D T G  + +++A D D             GDR    L  P 
Sbjct: 3352 PMFSHSVYTAVVSE----DATVGEPVIQLKADDVDSQLNGAVLYSIVSGDRHNQFLIDPL 3407

Query: 188  EKMFSINDSGHISIVDLSALNTSTIQLVVVATDTGNPPRQASV 230
              +  +N         L      +  L + A D+G PP  ++V
Sbjct: 3408 SGVIKVNKQ-------LDRETVPSYSLAIRALDSGTPPMSSTV 3443



 Score = 42.4 bits (98), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 52/185 (28%), Positives = 79/185 (42%), Gaps = 15/185 (8%)

Query: 50   YSVSALENLPVNYVLLTVTTNKPRDLRVKYW----LSNDYGERFSIS-RQGDISLMQCLD 104
            Y+    E+LP N VLL V      D+ +  W    L     + F+I    G+I     LD
Sbjct: 3047 YTAYIPEDLPANSVLLRVGATDA-DMGISGWIQYSLHGPGSQDFNIDPDSGEIKSSVPLD 3105

Query: 105  YETEDSYRFTVYATD-TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGS 163
             E   SY+    ATD       A V ++V +VND  P F   +Y   +      D    +
Sbjct: 3106 REMTPSYQLVAQATDGGGRWCRAVVYLTVTDVNDNPPIFTQSRYTTSV----YEDTVTKA 3161

Query: 164  VIGKVEAADGDK--GDRVTLSLRGPYEKMFSINDSGHISIVD--LSALNTSTIQLVVVAT 219
            ++ +++A D D+  G  V  SL       FSI+    I +++  L        Q+ V A+
Sbjct: 3162 LLTRIQAIDPDEGPGRMVIYSLADSAGGFFSIDKYSGIVVLEQVLDREIQPFYQITVCAS 3221

Query: 220  DTGNP 224
            D G+P
Sbjct: 3222 DQGSP 3226



 Score = 40.0 bits (92), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 66/231 (28%), Positives = 102/231 (44%), Gaps = 27/231 (11%)

Query: 27   ALATLIVSKAGTSLRELQFSKNEYSVSALEN-LPVNYVLLTVTTNKPRDLRVKYWLSNDY 85
            AL T++V +A  S     F+ + YS S  EN L +  V +        +  VKY L N  
Sbjct: 1970 ALVTILVREALDS--GFSFTHSIYSSSIKENVLNITKVAVVNAIGNRLNEPVKYNLLN-A 2026

Query: 86   GERFSISRQGDI--SLMQCLDYETEDSYRFTVYAT---DTLMTTSATVNISVVNVNDWDP 140
            G  F I     +  +     D E ++ Y   V A    D L      V + V ++ND  P
Sbjct: 2027 GTHFKIRPTSGVIETTGIAFDREEQEFYELVVEARKEHDPLHVARVVVRVQVEDINDNAP 2086

Query: 141  RFRYPQYELFLPHIPLA--DLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIN-D 195
             F      + LP+      +  PGS I +  A DGDKG   +V+  L+  +   F IN  
Sbjct: 2087 VF------VGLPYYAAVQVEAEPGSPIFRAMAVDGDKGINGQVSYYLKDDH-GHFEINRQ 2139

Query: 196  SGHISIVDL--SALNTSTIQLVVVATDTGNPPRQASVPAIMHFPEAIVQQA 244
            +G +S+     S L+    ++V+ A D+G PP  +++     FP  +V +A
Sbjct: 2140 TGSLSLKRSFESDLSNVEYRMVIYARDSGYPPLSSTI----EFPITVVNKA 2186



 Score = 39.3 bits (90), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 27/84 (32%), Positives = 43/84 (51%), Gaps = 2/84 (2%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWL-SNDYGERFSIS-RQGDISLMQC 102
            F+K+ Y+V+  E++ V+  +L +  + P    + Y +   D   +F I    G IS++  
Sbjct: 2190 FAKSFYTVAVNEDVAVHTPILGINASSPEGQSIIYTIVDGDPSLQFDIGFDTGVISVIHA 2249

Query: 103  LDYETEDSYRFTVYATDTLMTTSA 126
            LD+E   SY  TV ATD L    A
Sbjct: 2250 LDFEATSSYHLTVRATDYLTGAHA 2273



 Score = 38.9 bits (89), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 46/160 (28%), Positives = 68/160 (42%), Gaps = 21/160 (13%)

Query: 12   TLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVT--- 68
            TL+V+AI        + ATL++     +     F +  Y  S  E  P+N V+L +    
Sbjct: 1742 TLIVQAINMAGM--ASNATLLIQVVDDNDNPPVFQELHYHGSISEAAPINSVVLNLDGSP 1799

Query: 69   -------TNKPRDLRVKYWLSNDYGERFSI--SRQGDISLMQCLDYETEDSYRFTVYATD 119
                    ++ ++  + Y +  D  + F    S  G I  +  LDYET   + F V+  D
Sbjct: 1800 LVIKATDADRNQNALLVYQIIEDTAKMFFTVDSGTGSIRTIANLDYETCTIFHFHVHVRD 1859

Query: 120  T----LMTTSAT-VNISVVNVNDWDPRFRYPQYE--LFLP 152
                 L   S T V I V++ ND  PRF    YE  L LP
Sbjct: 1860 NGTPQLTAESPTEVTIQVIDTNDSPPRFTQSSYETVLLLP 1899


>gi|432107356|gb|ELK32760.1| Protocadherin-11 X-linked [Myotis davidii]
          Length = 821

 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 81/277 (29%), Positives = 116/277 (41%), Gaps = 59/277 (21%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGER-------------FSI 91
           F+ NEY+    ENL  +  +  +T   P           DYGE              F+I
Sbjct: 373 FTHNEYNFYVPENLSRHGTVGLITVTDP-----------DYGENSAVTLSILDVNDDFTI 421

Query: 92  SRQ-GDISLMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYP-- 145
             Q G I      D E ++SY F V A D      +++A V I+VV+VND  P F  P  
Sbjct: 422 DSQTGVIRPNISFDREKQESYTFYVQAEDGGRVSRSSTAKVTINVVDVNDNKPVFLVPSS 481

Query: 146 --QYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIND-SGHI 199
              YEL LP        PG+V+  V A D D G    L    + G    +F IN  +G+I
Sbjct: 482 NYSYELVLPST-----DPGTVVFTVVAIDNDTGMNAELQYSIVGGNARGLFIINQTTGNI 536

Query: 200 SIVDLSAL-NTSTIQLVVVATDTGNPPRQASVPAIMHFPEAIVQQAS-----SKLNSGTS 253
           ++ +   L +    +LVV A D G P    SV  +  F    V  A+        N+ TS
Sbjct: 537 TMKEKCVLADLGLHRLVVKANDLGQPDSLFSVVRVNLFVNESVTNATLIHELVHRNTETS 596

Query: 254 STVLI------------ILGVVLIVLGFVIILLILYI 278
            T  I            +  +V IV G + ++L+++I
Sbjct: 597 VTQNIETTDSSSPTTDYVKIMVAIVAGTITVILVIFI 633



 Score = 38.9 bits (89), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 36/139 (25%), Positives = 67/139 (48%), Gaps = 15/139 (10%)

Query: 103 LDYETEDSYRFTVYATDTLM---TTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADL 159
           LD E +D+Y   V   D      +++A + IS+ ++ND  P F   + E+ +P     + 
Sbjct: 10  LDREEKDTYVMKVKVEDGGFPQKSSTAILQISIADINDNHPVFTESEIEVSIPE----NA 65

Query: 160 TPGSVIGKVEAADGDKGDRVTLSL------RGPYEKMFSINDS-GHISIVD-LSALNTST 211
             G+ + ++ A D D G+   +            +++F +N S G I+I + L    +  
Sbjct: 66  PVGTSVTQLHATDADIGENAKIHFYFSNLVSNIAKRLFHLNSSTGLITIKEPLDREESPN 125

Query: 212 IQLVVVATDTGNPPRQASV 230
            +L+V+A+D G  P +A V
Sbjct: 126 HKLLVLASDGGLMPARAMV 144


>gi|402872824|ref|XP_003900299.1| PREDICTED: protocadherin gamma-A2 [Papio anubis]
          Length = 823

 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 57/193 (29%), Positives = 88/193 (45%), Gaps = 17/193 (8%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVT---TNKPRDLRVKYWLSNDYGERFSI----SRQGDI 97
           F++ EY +S  EN PV+  +LTVT    ++  + +V Y+L    GE   +    S  GD+
Sbjct: 242 FTQPEYRISVPENTPVDTRILTVTATDADEGYNAQVAYFLEKSPGETSEVFELKSTSGDL 301

Query: 98  SLMQCLDYETEDSYRFTVYATDTL-MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
           ++++ LDYE    +   + A D   + T   V I+V++VND  P F    Y         
Sbjct: 302 TIIKDLDYEDATFHEIDIEAQDGPGLLTRTKVIITVLDVNDNAPEF----YITSATSSVS 357

Query: 157 ADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDS--GHISIVDLSALNT---ST 211
            D  PG+VIG     D D G    ++   P    F +  S   +  +V   AL+    S 
Sbjct: 358 EDSPPGTVIGLFNVHDRDSGQNAFITCSLPENLPFKLEKSVDNYYRLVTTRALDREQFSF 417

Query: 212 IQLVVVATDTGNP 224
             + + A D GNP
Sbjct: 418 YNITLTAKDGGNP 430



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 71/285 (24%), Positives = 122/285 (42%), Gaps = 48/285 (16%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPR---DLRVKYWLSNDYGERFSISR-------Q 94
           FS+  YS    EN P    + +VT + P    +  + Y  + D  +   +S         
Sbjct: 452 FSRTSYSAYIPENNPRGASVFSVTAHDPDSNDNAHLTYSFAEDTVQGAPLSSYISINSDT 511

Query: 95  GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFL 151
           G +  ++  DYE     +  V A D+    ++++ ++N+ V++ ND  P   YP     +
Sbjct: 512 GVLYALRSFDYEQFRDLQLWVMARDSGNPPLSSNVSLNLFVLDQNDNAPEILYPA----I 567

Query: 152 P-----HIPLA--DLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-DSGHI- 199
           P      + LA     PG ++ KV A D D G    LS   L+     +F++   +G + 
Sbjct: 568 PTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYHLLKASEPGLFAVGLHTGEVR 627

Query: 200 ---SIVDLSALNTSTIQLVVVATDTGNPPRQASVPAIMHFPEAIVQ--------QASSKL 248
              +++D  AL  S   LVV   D G PP  A+V   +   + I          + S+K 
Sbjct: 628 TARALLDRDALKQS---LVVAVQDHGQPPLSATVTLTVAVADRIPDILADLGSLEPSAKP 684

Query: 249 NSGTSSTVLIILGVV--LIVLGFVIILLILYI---HKNKHTKNNG 288
           N    +  L++       + L FVI+LL L +   HK++  + +G
Sbjct: 685 NDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLRRWHKSRLMQASG 729



 Score = 41.6 bits (96), Expect = 0.61,   Method: Compositional matrix adjust.
 Identities = 48/177 (27%), Positives = 73/177 (41%), Gaps = 25/177 (14%)

Query: 67  VTTNKPRDLRVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDT---LMT 123
           +T + P +L  K   S D   R   +R         LD E    Y  T+ A D     ++
Sbjct: 382 ITCSLPENLPFKLEKSVDNYYRLVTTR--------ALDREQFSFYNITLTAKDGGNPSLS 433

Query: 124 TSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSL 183
           T A V + V ++ND  P F    Y  ++P     +   G+ +  V A D D  D   L+ 
Sbjct: 434 TDAHVLLQVADINDNAPAFSRTSYSAYIPE----NNPRGASVFSVTAHDPDSNDNAHLTY 489

Query: 184 R--------GPYEKMFSIN-DSGHI-SIVDLSALNTSTIQLVVVATDTGNPPRQASV 230
                     P     SIN D+G + ++          +QL V+A D+GNPP  ++V
Sbjct: 490 SFAEDTVQGAPLSSYISINSDTGVLYALRSFDYEQFRDLQLWVMARDSGNPPLSSNV 546


>gi|297676226|ref|XP_002816046.1| PREDICTED: protocadherin beta-9 [Pongo abelii]
          Length = 797

 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 61/202 (30%), Positives = 89/202 (44%), Gaps = 33/202 (16%)

Query: 95  GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFL 151
           G +  ++ LDYE    + F V A D     +++ A V + V++ ND  P   YP      
Sbjct: 511 GHLFALRSLDYEALQEFEFRVGARDRGSPALSSEALVRVLVLDANDNSPLVLYPLQNASA 570

Query: 152 PH---IPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSI-NDSGHISIVD- 203
           P    +P A   PG ++ KV A DGD G    LS   L+     +FS+   +G +     
Sbjct: 571 PCTELVPRA-AEPGYLVTKVVAVDGDSGQNAWLSYQLLKTTEPGLFSVWAHNGEVRTARL 629

Query: 204 LSALNTSTIQLVVVATDTGNPPRQASVPAIMH-------------FPEAIVQQASSKL-- 248
           LS  + +  +LVV+  D G PPR A+  A +H              PEA   QA + L  
Sbjct: 630 LSERDAAKHRLVVLVKDNGEPPRSAT--ATLHVLLVDGFSQPYLPLPEAAPTQAQADLLT 687

Query: 249 ----NSGTSSTVLIILGVVLIV 266
                +  S + L +L VVL V
Sbjct: 688 VYLVVALASVSSLFLLSVVLFV 709



 Score = 43.1 bits (100), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 44/138 (31%), Positives = 62/138 (44%), Gaps = 21/138 (15%)

Query: 102 CLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLAD 158
            LD E++  Y  T+  TD     + T   + + V +VND  P F    Y LF+      +
Sbjct: 408 ALDRESKAEYNITITVTDLGTPRLKTEYNITLQVCDVNDNAPAFTQTSYTLFVRE----N 463

Query: 159 LTPGSVIGKVEAADGDKGD--RVTLSL------RGPYEKMFSIN-DSGHISIVDLSALNT 209
            +P   IG V A D D G   +VT SL        P   + SIN D+GH  +  L +L+ 
Sbjct: 464 NSPALHIGSVSATDRDSGTNAQVTYSLLPSQDPHLPLASLVSINADNGH--LFALRSLDY 521

Query: 210 STIQ---LVVVATDTGNP 224
             +Q     V A D G+P
Sbjct: 522 EALQEFEFRVGARDRGSP 539



 Score = 40.0 bits (92), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 46/177 (25%), Positives = 80/177 (45%), Gaps = 17/177 (9%)

Query: 11  ITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTT- 69
           ++L + A+   +  R   +TL +     +    QF++  Y   A EN PV   ++ V+  
Sbjct: 208 LSLTLTALDGGSPSRSGTSTLRIVVLDVNDNAPQFAQALYETQAPENSPVGSPIVKVSAG 267

Query: 70  --NKPRDLRVKYWL---SNDYGERFSISR-QGDISLMQCLDYETEDSYRFTVYATD-TLM 122
             +   +  V Y     S D    F I+   G+I L + LDYE  +SY+  + A D   +
Sbjct: 268 DVDSGVNAEVSYSFFDASEDILTTFQINPFSGEIFLRELLDYELVNSYKINIQAMDGGGL 327

Query: 123 TTSATVNISVVNVNDWDPRFRYPQYELFLPHI--PLADLTPGSVIGKVEAADGDKGD 177
           +   TV + V++ ND  P       EL +  +   +A+ +PG V+   +  D D G+
Sbjct: 328 SARCTVLMKVLDTNDNPP-------ELIISSLSNSVAENSPGIVLAVFKIKDRDSGE 377


>gi|26331274|dbj|BAC29367.1| unnamed protein product [Mus musculus]
          Length = 428

 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 48/148 (32%), Positives = 74/148 (50%), Gaps = 14/148 (9%)

Query: 95  GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFL 151
           G + +++ LDYE   ++ F V ATD     +++ A V + V++ ND  P   YP      
Sbjct: 138 GQLFVLRALDYEALQAFEFHVGATDGGSPALSSQALVRMVVLDDNDNAPFVLYPMQNASA 197

Query: 152 PH---IPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSI---NDSGHISIV 202
           P+   +P A   PG ++ KV A D D G    LS   L+     +FS+   N   H S +
Sbjct: 198 PYTELLPRA-AEPGYLVTKVVAVDRDSGQNAWLSFQLLKATEPGLFSVWAHNGEVHTSRL 256

Query: 203 DLSALNTSTIQLVVVATDTGNPPRQASV 230
            LS  +    +L+++  D G+PPR ASV
Sbjct: 257 -LSERDVHKHRLILLVKDNGDPPRSASV 283


>gi|449482631|ref|XP_004176432.1| PREDICTED: protocadherin-16 [Taeniopygia guttata]
          Length = 2905

 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 70/244 (28%), Positives = 104/244 (42%), Gaps = 36/244 (14%)

Query: 17   AIQYDNQDRYALATLI-------VSKAGTSLRELQ--------FSKNEYSVSALENLPVN 61
            A+QY+    Y+LA +        +S   T L  +Q        F    Y V   E +PV+
Sbjct: 775  ALQYEAISAYSLAIVARDSGIPQLSSTFTLLVHVQAEDDNGPIFDTLTYRVEVQEGVPVS 834

Query: 62   YVLLTVTT--NKPRDLRVKYWLSNDYGERFS---ISRQGDISLMQCLDYETEDSYRFTVY 116
               L V    +      + Y L  D G+  S   +   G + +   LD ET D Y  TV 
Sbjct: 835  TRFLQVRALAHDVESTALTYHLRAD-GDAASFGIVPESGWLYVKSALDRETRDLYVLTVL 893

Query: 117  AT--------DTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKV 168
            A+        D   T ++TV IS+ + ND  PR    +Y   +      +  PGS +G+V
Sbjct: 894  ASVGGTGAAADARKTGTSTVRISITDENDNSPRLSEERYFFTVSE----NQAPGSTVGRV 949

Query: 169  EAADGDKGDRVTLSLR-GPYEKMFSIN-DSGHISIV-DLSALNTSTIQLVVVATDTGNPP 225
             A+D D G    L+ R   ++  F I+  +G +S    L     S  QL+V+  D G PP
Sbjct: 950  TASDRDAGQNSRLTYRLLQHDPNFLIHTQTGEVSTKHSLDREQQSNFQLLVIVQDGGAPP 1009

Query: 226  RQAS 229
            R A+
Sbjct: 1010 RSAT 1013



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 60/197 (30%), Positives = 88/197 (44%), Gaps = 17/197 (8%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSND--YGERFSISRQ-GDISLMQ 101
            F K EY    +ENLP    +L V     RDL     +S     G  FSI  Q G I   +
Sbjct: 1458 FEKPEYEAHVMENLPAGSPVLQVLATD-RDLGANGQVSYGGLSGGPFSIHPQTGLIVTTR 1516

Query: 102  CLDYETEDSYRFTVYATDTLMT---TSATVNISVVNVNDWDPRFRYPQYELFLPHIPLAD 158
             LD E ++ +  TVYA D  +    T ATV ++V + ND  P      + + +P     +
Sbjct: 1517 ALDREEQEQHVLTVYARDAGLPPSLTKATVWVTVGDENDHAPHLESESFSVEVP-----E 1571

Query: 159  LTPGSVIGKVEAADGDKGDRVTLSLR---GPYEKMFSIND-SGHISIVD-LSALNTSTIQ 213
                  +  + A D D G+   L  R   G   + FS++  SG +S    L     ++  
Sbjct: 1572 NQSRVALYTLRATDPDGGENGRLEYRVAGGDPGQDFSLDPVSGVLSTAHALDREQIASYS 1631

Query: 214  LVVVATDTGNPPRQASV 230
            L+VV  D G+PPR A++
Sbjct: 1632 LIVVVQDHGSPPRSATM 1648



 Score = 55.1 bits (131), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 50/150 (33%), Positives = 68/150 (45%), Gaps = 11/150 (7%)

Query: 81   LSNDYGERFSISR-QGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWD 139
            L  D  + F + R  G I+L   LD+E    Y  T+ A+DT   T A + + V +VND  
Sbjct: 2098 LEGDMADTFGVLRYGGHIALTGPLDHEQRSRYTLTLRASDTRHETEANLTVLVEDVNDNV 2157

Query: 140  PRFRYPQYELFLP-HIPLADLTPGSVIGKVEAADGDKGDR--VTLSLRGPYEKMFSINDS 196
            P F    Y++ LP H P      G+VI  V A D D G    +T  L  P   +     +
Sbjct: 2158 PTFTQVFYQVLLPEHTPA-----GTVILTVSATDPDSGSNGDITFHLAVPSPDVAIDPSN 2212

Query: 197  GHISIVDLSALNTS--TIQLVVVATDTGNP 224
            G +        N S  T+ LVV A D G+P
Sbjct: 2213 GTLFTTRQVEFNASQPTLDLVVEARDHGSP 2242



 Score = 51.2 bits (121), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 55/180 (30%), Positives = 84/180 (46%), Gaps = 35/180 (19%)

Query: 84  DYGE-------------RFSISRQGDISLMQC----LDYETEDSYRFTVYATDT----LM 122
           DYGE             +F+++ + +I  + C    LD E  DSY   V ATD+    L 
Sbjct: 214 DYGEYSNVNVTLEGGDGKFALTTKDNIIYLICVDQLLDREERDSYDLRVTATDSGTPPLR 273

Query: 123 TTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG--DRVT 180
             SA V + V++VND  P F   +Y+  +P +    + PGS + +V A D D+G    V 
Sbjct: 274 AESAFV-LQVMDVNDNPPLFDQQEYKQSIPEV----VYPGSFVLQVTARDKDQGPNGEVR 328

Query: 181 LSL---RGPYEKMFSINDSGHI--SIVDLSALNTSTIQLVVVATDTGNPPRQASVPAIMH 235
            S+   R  +   F+I+ +  I  +   L        QL V+ATD G P   +S  A++H
Sbjct: 329 YSILHGRDTHSSWFTIDPATGIITTAAPLDYEKDPQPQLTVLATDRGTPALSSS--AVVH 386



 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 58/210 (27%), Positives = 93/210 (44%), Gaps = 17/210 (8%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWLSNDYGERFSISRQ-GDISLM 100
            F++  Y+V   E+LPV  ++L +    P +    +V Y+L N+    F +  Q G I   
Sbjct: 1664 FAQASYTVEVPEDLPVGALVLQLVAEDPDEGTNGQVSYYLGNESLGMFQVEPQSGCIRSA 1723

Query: 101  QCLDYETEDSYRFTVYATDTL----MTTSATVNISVVNVNDWDPRFRYPQYELFLPH-IP 155
            Q LD E + +Y F   A D+      + +  V + V +VND  P F      + L    P
Sbjct: 1724 QALDRERQPTYSFLAKAVDSAPWEPKSAAVRVTVVVRDVNDHVPAFLQSPLTVNLSRDTP 1783

Query: 156  LADLTPGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSIND-SGHISIVD-LSALNTSTI 212
            L D     V+  ++A D D G   ++  R       F IN  +G I ++  L +L+    
Sbjct: 1784 LMD-----VVATMKAEDRDAGANASILYRFATPSSAFMINSYTGEIRLLQRLGSLSQRQR 1838

Query: 213  QLVVVATDTGNPPRQASVPAIMHFPEAIVQ 242
             L V+A D G P   ++   ++H  E   Q
Sbjct: 1839 TLFVLAMDLGQPALSSTGVVVIHVQEEPYQ 1868



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 62/200 (31%), Positives = 97/200 (48%), Gaps = 30/200 (15%)

Query: 35   KAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGERFSISRQ 94
            + GT++  L+    + S    EN   +Y +  V+ N     +V+  ++   G+   +  Q
Sbjct: 2278 RPGTTVLMLEAGDADLS---RENAGFDYTI--VSGNGGNAFQVESRVARAGGQ---LRTQ 2329

Query: 95   GDISLMQCLDYETEDSYRFTVYATDT-LMTTSATVN--ISVVNVNDWDPRFRYPQYELFL 151
            G + L++ LD+E    Y  TV A+D  L   SATV   I+V +VND  P F   +Y   +
Sbjct: 2330 GALVLVESLDFEAIPVYNLTVAASDRGLPQRSATVPVLITVQDVNDNPPVFSRAEYRAVV 2389

Query: 152  PHIPLADLTPGSVIGKVEAADGDKGDR----VTLSLRGPYEKMFSINDS-GHISIV---- 202
                L    PG+ + +V A D D G R     T+S  G    +F +++S G +S+V    
Sbjct: 2390 SEAAL----PGTELLRVAAHDADSGPRGRVHYTIS-SGDQHGLFQLHESTGALSLVRPLD 2444

Query: 203  -DLSALNTSTIQLVVVATDT 221
             +  AL+T    LVV ATDT
Sbjct: 2445 REAQALHT----LVVQATDT 2460



 Score = 47.8 bits (112), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 60/197 (30%), Positives = 88/197 (44%), Gaps = 25/197 (12%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGE----------RFSISRQ 94
           F  N Y+VS  EN PV    L VT     D     + S  Y            +FSI + 
Sbjct: 399 FKSNFYNVSLKENTPVGTCFLQVTAT---DSDSGAFGSLSYSIGSGIGSIIPTQFSIDKH 455

Query: 95  -GDISLMQCLDY-ETEDSYRFTVYATD-TLMTTSATVNISVVNVNDWDPRFRYPQYELFL 151
            G +  +Q LD  E   +Y FT+ A D   + +   V + + + ND  P F   +Y   +
Sbjct: 456 SGQLCTVQPLDRDEGTSAYDFTIIAVDGGGLNSMVYVKVFLEDTNDNRPVFYPLEYAASI 515

Query: 152 PHIPLADLTPGSVIGKVEAADGDKG--DRVTLSL-RGPYEKMFSIN-DSGHISIV-DLSA 206
               +    PG+ + +V A D D+G   RVT  +  G    +FS+N D+G IS+   LS 
Sbjct: 516 STQSM----PGTAVLRVTAHDKDEGLNGRVTYRIVLGNSPPLFSLNKDTGVISLSWSLSG 571

Query: 207 LNTSTIQLVVVATDTGN 223
              + +QLV+ A D G 
Sbjct: 572 KANTLVQLVISAQDGGG 588



 Score = 45.1 bits (105), Expect = 0.052,   Method: Compositional matrix adjust.
 Identities = 43/138 (31%), Positives = 68/138 (49%), Gaps = 11/138 (7%)

Query: 94   QGDISLMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELF 150
            +G +S++  L+ E    +  TV ATD     ++ +  +++ V++VND  P F  P+YE  
Sbjct: 1407 RGALSIVGALNREEVAQHNLTVVATDHGFPRLSATQLLSVLVLDVNDEAPVFEKPEYEA- 1465

Query: 151  LPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSGHISIVDLSALNTS 210
              H+ + +L  GS + +V A D D G    +S  G     FSI+    + IV   AL+  
Sbjct: 1466 --HV-MENLPAGSPVLQVLATDRDLGANGQVSYGGLSGGPFSIHPQTGL-IVTTRALDRE 1521

Query: 211  TIQ---LVVVATDTGNPP 225
              +   L V A D G PP
Sbjct: 1522 EQEQHVLTVYARDAGLPP 1539



 Score = 42.4 bits (98), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 55/203 (27%), Positives = 85/203 (41%), Gaps = 18/203 (8%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGE---RFSI-SRQGDISLM 100
           F + +Y  S  E++P    + +V    P       + S   G+    FSI S  G +   
Sbjct: 611 FEQAQYFFSVPEDMPQGASVGSVQAQNPPGHADDIFYSISSGDPHGYFSIDSASGQLRTS 670

Query: 101 QCLDYETEDSYRFTVYATDTL--MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLAD 158
             LD+E++      V A        ++  V ISV +VND  P F  P   + LP      
Sbjct: 671 LPLDHESQSVLILDVQARSGSPPAYSNTRVKISVSDVNDNMPAFPTPSDSILLPEA---- 726

Query: 159 LTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIND-SGHISIVDLSALNTSTI--- 212
             PG+ +  ++A D D G   +VT  L    E  F +   SG + +  L AL    I   
Sbjct: 727 TEPGTTVYTLQAEDRDSGANGQVTFELLSGGEGTFIVERASGAVRL--LGALQYEAISAY 784

Query: 213 QLVVVATDTGNPPRQASVPAIMH 235
            L +VA D+G P   ++   ++H
Sbjct: 785 SLAIVARDSGIPQLSSTFTLLVH 807



 Score = 42.0 bits (97), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 38/130 (29%), Positives = 62/130 (47%), Gaps = 22/130 (16%)

Query: 122  MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGD-----KG 176
            +++ ATV + V++VND  P F+ P Y   +P     DL PG+ +  +EA D D      G
Sbjct: 2244 LSSWATVQLQVLDVNDHSPLFQEPCYNASVPE----DLRPGTTVLMLEAGDADLSRENAG 2299

Query: 177  DRVTLSLRGPYEKMFSIND-----SGHI----SIVDLSALNTSTI---QLVVVATDTGNP 224
               T+ + G     F +        G +    ++V + +L+   I    L V A+D G P
Sbjct: 2300 FDYTI-VSGNGGNAFQVESRVARAGGQLRTQGALVLVESLDFEAIPVYNLTVAASDRGLP 2358

Query: 225  PRQASVPAIM 234
             R A+VP ++
Sbjct: 2359 QRSATVPVLI 2368



 Score = 41.2 bits (95), Expect = 0.79,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 7/85 (8%)

Query: 96  DISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLP 152
           D+ +   LD E   SY   + A D      +T  T+++S+ ++ND  P F   +Y   + 
Sbjct: 26  DLVVSNVLDRENRSSYSLLLEAYDGGSPPRSTQMTLDVSIQDINDNAPSFNQSRYHTLIS 85

Query: 153 HIPLADLTPGSVIGKVEAADGDKGD 177
                +L PGS I +V A+D D+GD
Sbjct: 86  E----NLKPGSSILQVFASDADEGD 106



 Score = 40.8 bits (94), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 59/200 (29%), Positives = 82/200 (41%), Gaps = 26/200 (13%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNK----PRDLRVKYWLSN-DYGERFSISRQ-GDIS 98
            FS+ EY     E       LL V  +     PR  RV Y +S+ D    F +    G +S
Sbjct: 2380 FSRAEYRAVVSEAALPGTELLRVAAHDADSGPRG-RVHYTISSGDQHGLFQLHESTGALS 2438

Query: 99   LMQCLDYETEDSYRFTVYATDTLMTTSA--TVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
            L++ LD E +  +   V ATDT     A   V I V ++ND  P F     E+    I  
Sbjct: 2439 LVRPLDREAQALHTLVVQATDTPGGHFALVPVAIEVKDINDNKPYF---PVEMLSASI-R 2494

Query: 157  ADLTPGSVIGKVEAADGDKGDRVTLSL-----------RGPYEKMFSIN-DSGHI-SIVD 203
             +L PG+++  + A D D G    L              G     F++N  SG + S + 
Sbjct: 2495 ENLPPGTLVTTLRAVDADTGAFGELRYVVLEQAVGDPSTGDGRDAFAVNGSSGELRSRLT 2554

Query: 204  LSALNTSTIQLVVVATDTGN 223
                     QL+V ATD GN
Sbjct: 2555 FDYERAKAFQLLVRATDAGN 2574


>gi|443732010|gb|ELU16902.1| hypothetical protein CAPTEDRAFT_195133 [Capitella teleta]
          Length = 952

 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 61/201 (30%), Positives = 102/201 (50%), Gaps = 24/201 (11%)

Query: 44  QFSKNEYSVSALEN----LPVNYVLLTVTTNKPRDLRVKYWL-SNDYGERFSISRQ-GDI 97
           QF+ + YS+  LEN      V ++        P +    Y L      + F ++R  G++
Sbjct: 567 QFTSSVYSLGVLENQEPGTQVGFLDAIDGDKSPYNKHYYYLLPRGSLSDAFEVNRDTGEV 626

Query: 98  SLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYE---LFL 151
           +  + LD E    Y     A DT   +++++AT++I V+++ND  P+F +P  +   +F+
Sbjct: 627 TTTRRLDREEHKIYELIAVARDTNGPVLSSTATLSIHVMDLNDNPPQFTFPSADNNTVFM 686

Query: 152 PH-IPLADLTPGSVIGKVEAADGDKGD--RVTLSL-RGPYEKMFSINDS-GHISI-VDLS 205
            H +PL     G ++ ++ A D D G   RV   L +G  + +FSI+ + G +SI VDLS
Sbjct: 687 SHKVPL-----GFIVAQIHADDADLGSNGRVKYQLIQGNNDAVFSIDPTLGVLSINVDLS 741

Query: 206 AL-NTSTIQLVVVATDTGNPP 225
              +  T  L V ATD G+ P
Sbjct: 742 DQPDNRTWHLHVRATDHGDEP 762


>gi|397518002|ref|XP_003829189.1| PREDICTED: protocadherin beta-5 [Pan paniscus]
          Length = 795

 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 48/151 (31%), Positives = 72/151 (47%), Gaps = 12/151 (7%)

Query: 95  GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFL 151
           G +  ++ LDYE   ++ F V ATD     +++ A V + V++ ND  P   YP      
Sbjct: 510 GHLFALRSLDYEALQAFEFRVGATDRGSPALSSEALVRVLVLDANDNSPFVLYPLQNGSA 569

Query: 152 PHIPLADLT--PGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSI-NDSGHISIVD-L 204
           P   L      PG ++ KV A DGD G    LS   L+     +FS+   +G +     L
Sbjct: 570 PCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKATEPGLFSMWAHNGEVRTARLL 629

Query: 205 SALNTSTIQLVVVATDTGNPPRQASVPAIMH 235
           S  + +  +LVV+  D G PPR A+  A +H
Sbjct: 630 SERDAAKHRLVVLVKDNGEPPRSAT--ATLH 658



 Score = 46.2 bits (108), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 45/139 (32%), Positives = 64/139 (46%), Gaps = 21/139 (15%)

Query: 101 QCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLA 157
           + LD E++  Y  T+  TD     + T   + + V +VND  P F    Y LF+      
Sbjct: 406 RTLDRESQAEYNITITVTDMGTPRLKTEHNITVLVSDVNDNAPAFTQTSYTLFVRE---- 461

Query: 158 DLTPGSVIGKVEAADGDKGD--RVTLSLRGP------YEKMFSIN-DSGH---ISIVDLS 205
           + +P   IG+V A D D G   +VT SL  P         + SIN D+GH   +  +D  
Sbjct: 462 NNSPALQIGRVSATDRDSGTNAQVTYSLLPPQNPHLRLASLVSINADNGHLFALRSLDYE 521

Query: 206 ALNTSTIQLVVVATDTGNP 224
           AL     +  V ATD G+P
Sbjct: 522 ALQ--AFEFRVGATDRGSP 538



 Score = 45.4 bits (106), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 40/144 (27%), Positives = 66/144 (45%), Gaps = 18/144 (12%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYG--------ERFSI-SRQ 94
           +F ++ Y V   EN P+N +++ V+    RDL    + S  Y         + F I  + 
Sbjct: 241 EFLQSLYEVQVPENSPLNSLVVVVSA---RDLDAGAYGSVAYALFQGDEVTQPFVIDEKT 297

Query: 95  GDISLMQCLDYETEDSYRFTVYATD-TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
           G+I L + LD+E    Y   + ATD   ++   TV + VV+VND       P+  +    
Sbjct: 298 GEIRLKRALDFEATPYYNVEIVATDGGGLSGKCTVAMEVVDVND-----NVPELTMSTLS 352

Query: 154 IPLADLTPGSVIGKVEAADGDKGD 177
            P+ +  P +V+     +D D GD
Sbjct: 353 SPIPENAPETVVAVFSVSDPDSGD 376


>gi|344243496|gb|EGV99599.1| Protocadherin Fat 3 [Cricetulus griseus]
          Length = 2774

 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 71/232 (30%), Positives = 106/232 (45%), Gaps = 23/232 (9%)

Query: 13   LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKP 72
            L+ RA   D   R+  A +++     +     FS N Y+    EN     +L  V    P
Sbjct: 1880 LIARAT--DGGGRFCHANVLLLLEDVNDNPPVFSSNHYTACVYENTATKALLTRVQAMDP 1937

Query: 73   R---DLRVKYWLSNDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATD----TLMTT 124
                + +V Y L +     FSI S  G I L + LD E + SY  +V ATD      +++
Sbjct: 1938 DVGINRKVVYSLEDSASGVFSIDSSSGVIILERPLDREQQSSYNISVRATDQSPRQSLSS 1997

Query: 125  SATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGD--RVTLS 182
             A+V I+V+++ND  P F    Y + +P     D + G+ +  V A   D G    +T  
Sbjct: 1998 LASVTITVLDINDNPPVFERRDYLVTVPE----DTSLGTQVLSVFATSKDIGTNAEITYL 2053

Query: 183  LR-GPYEKMFSIN-DSGHISIVDLSALNTSTIQ---LVVVATDTGNPPRQAS 229
            +R G  +  F IN  +G IS+  L AL+  T +   LVV A D G P   A+
Sbjct: 2054 IRSGNEQGKFRINPKTGGISV--LEALDYETCKRFYLVVEAKDGGTPALSAA 2103



 Score = 44.7 bits (104), Expect = 0.083,   Method: Compositional matrix adjust.
 Identities = 69/231 (29%), Positives = 105/231 (45%), Gaps = 27/231 (11%)

Query: 27  ALATLIVSKAGTSLRELQFSKNEYSVSALEN-LPVNYVLLTVTTNKPRDLRVKYWLSNDY 85
           A+ T++V +A  S   L F+++ YS S  EN   +  V +        +  +KY + N  
Sbjct: 745 AMVTIMVKEAMDS--GLHFTQSFYSTSISENSTNITKVAIVNAVGNRLNEPLKYSILNP- 801

Query: 86  GERFSI-SRQGDISLMQC-LDYETEDSYRFTVYAT---DTLMTTSATVNISVVNVNDWDP 140
           G +F I S  G I       D E ++ Y   V A+   D L      V +++ +VND  P
Sbjct: 802 GNKFKIKSTSGVIQTTGVPFDREEQELYELVVEASRELDHLRVARVVVRVNIEDVNDNSP 861

Query: 141 RFRYPQYELFLPHIPLA--DLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIN-D 195
            F      + LP+      D  PG++I +V A D DKG    VT  L+  Y   F IN +
Sbjct: 862 VF------VGLPYYAAVQVDAEPGTLIYRVTAIDKDKGANGEVTYILQDDY-GHFEINPN 914

Query: 196 SGHISIVDLSALNTSTIQ--LVVVATDTGNPPRQASVPAIMHFPEAIVQQA 244
           SG++ + +    + S I   + ++A D GNP    SV      P  IV +A
Sbjct: 915 SGNVILKEAFNSDLSNIDYGVTILAKDGGNPSLSKSV----ELPITIVNKA 961



 Score = 43.9 bits (102), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 43/150 (28%), Positives = 66/150 (44%), Gaps = 11/150 (7%)

Query: 88   RFS---ISRQGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRY 144
            RF+   +  +  + + + LD E +D Y   + A+D L  T A V ++V +VND  P    
Sbjct: 1751 RFALGMVQSEWKVYVKRPLDREEQDVYFLNITASDGLFVTQAMVEVTVSDVNDNSPICDQ 1810

Query: 145  PQYELFLPHIPLADLTPGSVIGKVEAADGDKGDR--VTLSLRGPYEKMFSIN-DSGHI-S 200
              Y   LP     D+    +I KV A D D G    +  SL G     F ++ +SG + +
Sbjct: 1811 VAYSASLPE----DIPSNKIILKVSAKDADIGSNGDIRYSLYGSGNTEFFLDPESGELKT 1866

Query: 201  IVDLSALNTSTIQLVVVATDTGNPPRQASV 230
            +  L         L+  ATD G     A+V
Sbjct: 1867 LALLDRERVPVYNLIARATDGGGRFCHANV 1896



 Score = 42.0 bits (97), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 40/143 (27%), Positives = 70/143 (48%), Gaps = 17/143 (11%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYG-----ERFSI-SRQG 95
            F  + Y    +E +PV   L  V     +   + +V Y L +D       E F I S  G
Sbjct: 1593 FETSSYETIIMEGMPVGTKLAQVRAIDMDWGANGQVTYSLHSDSHLEKVMEAFDIDSNTG 1652

Query: 96   DISLMQCLDYETEDSYRFTVYATDT----LMTTSATVNISVVNVNDWDPRFRYPQYELFL 151
             IS ++ LD+ET+ ++ F+V A+D      +++ A V++ V ++ND  P F    +E++ 
Sbjct: 1653 WISTLKDLDHETDPAFSFSVVASDLGEAFSLSSMALVSVKVTDINDNAPVF---AHEVYR 1709

Query: 152  PHIPLADLTPGSVIGKVEAADGD 174
             ++  +D  PG V+  +   D D
Sbjct: 1710 GNVKESD-PPGEVVAVLSTLDKD 1731



 Score = 42.0 bits (97), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 54/202 (26%), Positives = 86/202 (42%), Gaps = 22/202 (10%)

Query: 44  QFSKNEYSVSALEN-LPVNYVLLTVTTNKPRDLRVKYWLSNDYG----ERFSIS-RQGDI 97
           +FS+  Y V+  E+ LP   +L    T++    ++ Y + +        +F +    G +
Sbjct: 238 EFSQPHYDVTISEDVLPDTEILQIEATDRDEKHKLSYTIHSSIDTMSMRKFRMDPSTGVL 297

Query: 98  SLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHI 154
              + LD+E +D +   +   D         A V ++V + ND  P F  P YE  +   
Sbjct: 298 YTAERLDHEAQDKHILNIMVRDQEFPYRRNLARVIVNVEDANDHSPYFTSPLYEASV--- 354

Query: 155 PLADLTPGSVIGKVEAADGDKGDRVTLSLR---GPYEKMFSINDS-GHISIV---DLSAL 207
                  GSV+ +V A D DKG+   L      G     F I    G I+I    D++A+
Sbjct: 355 -FESAALGSVVLQVTALDKDKGENAELIYSIEAGNTGNTFKIEPVLGIITISKEPDMTAM 413

Query: 208 NTSTIQLVVVATDTGNPPRQAS 229
                 L V ATD G+PP  A+
Sbjct: 414 --GQFVLSVKATDQGSPPMSAT 433



 Score = 41.6 bits (96), Expect = 0.74,   Method: Compositional matrix adjust.
 Identities = 34/112 (30%), Positives = 60/112 (53%), Gaps = 10/112 (8%)

Query: 45   FSKNEYSVSALENLPVNYVLLTV-TTNKP--RDLRVKYWL--SNDYGERFSIS-RQGDIS 98
            F + +Y V+  E+  +   +L+V  T+K    +  + Y +   N+ G +F I+ + G IS
Sbjct: 2015 FERRDYLVTVPEDTSLGTQVLSVFATSKDIGTNAEITYLIRSGNEQG-KFRINPKTGGIS 2073

Query: 99   LMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQY 147
            +++ LDYET   +   V A D     ++ +AT++I + NVND  P+F    Y
Sbjct: 2074 VLEALDYETCKRFYLVVEAKDGGTPALSAAATISIDLTNVNDNPPQFSQDVY 2125



 Score = 41.2 bits (95), Expect = 0.95,   Method: Compositional matrix adjust.
 Identities = 56/202 (27%), Positives = 95/202 (47%), Gaps = 34/202 (16%)

Query: 45   FSKNEYSVSALENLPVNYVL--LTVTTNKPRDLRVKYWLSNDYGER--------FSISRQ 94
            F++++YS +  E+  +   +  L +  N+     V++ + N  GER        F I ++
Sbjct: 1487 FTQSQYSFTIAEDTAIGSTVDTLRILPNQ----SVRFSMVN--GERPENNKEGVFIIEQE 1540

Query: 95   -GDISLMQCLDYETEDSYRFTVYATDTL----MTTSATVNISVVNVNDWDPRFRYPQYEL 149
             G I L + LD+E   ++ F V AT  L    +  +  V++ V+++ND  P F    YE 
Sbjct: 1541 TGAIKLDKRLDHEVSPAFHFKVAATIPLDKVDIVFTVDVDVKVLDLNDNKPVFETSSYET 1600

Query: 150  FLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGP--YEKM---FSIN-DSGHISI 201
             +    +  +  G+ + +V A D D G   +VT SL      EK+   F I+ ++G IS 
Sbjct: 1601 II----MEGMPVGTKLAQVRAIDMDWGANGQVTYSLHSDSHLEKVMEAFDIDSNTGWIST 1656

Query: 202  V-DLSALNTSTIQLVVVATDTG 222
            + DL           VVA+D G
Sbjct: 1657 LKDLDHETDPAFSFSVVASDLG 1678



 Score = 40.8 bits (94), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 26/96 (27%), Positives = 45/96 (46%), Gaps = 4/96 (4%)

Query: 95  GDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHI 154
           G I + + LD E    Y  +V  TD        V I V++ ND  P F  P Y++ +   
Sbjct: 192 GTIVIAKPLDAEQRSVYNMSVEVTDGTNVAVTQVFIKVLDNNDNGPEFSQPHYDVTISE- 250

Query: 155 PLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKM 190
              D+ P + I ++EA D D+  +++ ++    + M
Sbjct: 251 ---DVLPDTEILQIEATDRDEKHKLSYTIHSSIDTM 283



 Score = 40.0 bits (92), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 54/229 (23%), Positives = 98/229 (42%), Gaps = 11/229 (4%)

Query: 13  LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKP 72
           L V+A    +    A A + VS + +     +F+  +Y     EN+ +   ++ ++    
Sbjct: 418 LSVKATDQGSPPMSATAIVRVSISMSDNSHPKFTHKDYQAEVNENVDIGTSVILISAISQ 477

Query: 73  RDLRVKYWLSNDYGERFSIS-RQGDISLMQCLDYETEDSYRFTVYATDTL-MTTSATVNI 130
             L  +    N  G  F+I+   G I+  + LDYE   +Y+  + AT+   M ++ATV+I
Sbjct: 478 STLIYEVKDGNING-VFTINPYSGVITTRRALDYEQTSAYQLIIQATNMAGMASNATVSI 536

Query: 131 SVVNVNDWDPRFRYPQYELFLPHIP-----LADLTPGSVIGKVEAADGDKGDRVTLSLRG 185
            +V+ ND  P F   QY   L         ++ L    ++ +   AD ++   +   +  
Sbjct: 537 QIVDENDNPPVFLSSQYSGSLSEAAPINSIVSSLDNSPLVIRATDADSNQNALLVYQIVE 596

Query: 186 PYEKMFSINDSGHISIVDLSALNTSTI---QLVVVATDTGNPPRQASVP 231
              K F   DS   +I  +++L+   I      V   D+G+P   A  P
Sbjct: 597 STAKKFFTVDSSTGAIRTIASLDHEAIAHFHFHVHVRDSGSPQLTAESP 645



 Score = 39.7 bits (91), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 51/189 (26%), Positives = 81/189 (42%), Gaps = 17/189 (8%)

Query: 50   YSVSALENLPVNYVLLTVTTNKPR-----DLRVKYWLSNDYGERFSISRQGDISLMQCLD 104
            YS S  E++P N ++L V+          D+R   + S +  E F     G++  +  LD
Sbjct: 1813 YSASLPEDIPSNKIILKVSAKDADIGSNGDIRYSLYGSGN-TEFFLDPESGELKTLALLD 1871

Query: 105  YETEDSYRFTVYATD-TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGS 163
             E    Y     ATD       A V + + +VND  P F    Y   +      +    +
Sbjct: 1872 RERVPVYNLIARATDGGGRFCHANVLLLLEDVNDNPPVFSSNHYTACV----YENTATKA 1927

Query: 164  VIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDSGHISIVD--LSALNTSTIQLVVVAT 219
            ++ +V+A D D G   +V  SL      +FSI+ S  + I++  L     S+  + V AT
Sbjct: 1928 LLTRVQAMDPDVGINRKVVYSLEDSASGVFSIDSSSGVIILERPLDREQQSSYNISVRAT 1987

Query: 220  DTGNPPRQA 228
            D    PRQ+
Sbjct: 1988 DQS--PRQS 1994



 Score = 38.5 bits (88), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 24/73 (32%), Positives = 39/73 (53%), Gaps = 3/73 (4%)

Query: 148  ELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSGHISIVDLSAL 207
            E+F+  + + D  PG VIGK+ A D D  D +T +L+   + +F +N S    I+ L  L
Sbjct: 2334 EIFI--VTMEDDFPGGVIGKIHATDQDMYDVLTFALKSEQKSLFKVN-SHDGKIIALGGL 2390

Query: 208  NTSTIQLVVVATD 220
            ++    L V  +D
Sbjct: 2391 DSGKYVLNVSVSD 2403


>gi|119625608|gb|EAX05203.1| FAT tumor suppressor homolog 4 (Drosophila) [Homo sapiens]
          Length = 4929

 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 57/183 (31%), Positives = 89/183 (48%), Gaps = 16/183 (8%)

Query: 56   ENLPVNYVLLTVTTNKPR---DLRVKYWLSNDYGERFSISR-QGDISLMQCLDYETEDSY 111
            EN P++ V+       P    +  ++Y L N  G +FSI    G++ L   LD E   +Y
Sbjct: 2008 ENTPIDTVVFKAQATDPDSGPNSYIEYTLLNPLGNKFSIGTIDGEVRLTGELDREEVSNY 2067

Query: 112  RFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKV 168
              TV ATD     +++S  V + V+++ND +P F    Y++ +    L     G+ I +V
Sbjct: 2068 TLTVVATDKGQPSLSSSTEVVVMVLDINDNNPIFAQALYKVEINENTLT----GTDIIQV 2123

Query: 169  EAADGDKGDRVTLS---LRGPYEKMFSIND-SGHISIVD-LSALNTSTIQLVVVATDTGN 223
             AADGD+G    +    + G   + F I+  +G I++   L    T T  L V ATD G+
Sbjct: 2124 FAADGDEGTNGQVRYGIVNGNTNQEFRIDSVTGAITVAKPLDREKTPTYHLTVQATDRGS 2183

Query: 224  PPR 226
             PR
Sbjct: 2184 TPR 2186



 Score = 57.8 bits (138), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 47/158 (29%), Positives = 82/158 (51%), Gaps = 13/158 (8%)

Query: 87   ERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDTL---MTTSATVNISVVNVNDWDPRF 142
             +F+I S  G ++L+  LDYE   +Y   + A D+    + ++ T+NI +++ ND  P F
Sbjct: 1256 RQFAIDSTSGQVTLIGKLDYEATPAYSLVIQAVDSGTIPLNSTCTLNIDILDENDNTPSF 1315

Query: 143  RYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTL--SLRGPY-EKMFSIN-DSGH 198
              P+  LF+    L ++  G ++  V A D D GD   L  S+ G      FSI+ ++G 
Sbjct: 1316 --PKSTLFVD--VLENMRIGELVSSVTATDSDSGDNADLYYSITGTNNHGTFSISPNTGS 1371

Query: 199  ISIVDLSALNTSTI-QLVVVATDTGNPPRQASVPAIMH 235
            I +       T ++ +L + A D G PPR +++  ++H
Sbjct: 1372 IFLAKKLDFETQSLYKLNITAKDQGRPPRSSTMSVVIH 1409



 Score = 54.7 bits (130), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 58/198 (29%), Positives = 88/198 (44%), Gaps = 24/198 (12%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLS-NDYGERFSISRQGDISLM 100
            F +  Y V+  E+ PVN     V     +   +  + Y ++  + G+ F I   G + + 
Sbjct: 996  FDQLSYEVTLSESEPVNSRFFKVQASDKDSGANGEIAYTIAEGNTGDAFGIFPDGQLYIK 1055

Query: 101  QCLDYETEDSYRFTVYATDTLMTT-SATVNISVV--NVNDWDPRFRYPQYELFLPHIPLA 157
              LD E +D Y   V A+D  +   SATVN++V+  +VND  P F    Y  +      A
Sbjct: 1056 SELDRELQDRYVLMVVASDRAVEPLSATVNVTVILEDVNDNRPLFNSTNYTFYFEEEQRA 1115

Query: 158  DLTPGSVIGKVEAADGDKGD----RVTLSLRGPYEKMFSINDSGHIS---IVDLSAL--- 207
                GS +GKV A D D G     R +  +  P  ++ +I  SG I+     D  +L   
Sbjct: 1116 ----GSFVGKVSAVDKDFGPNGEVRYSFEMVQPDFELHAI--SGEITNTHQFDRESLMRR 1169

Query: 208  -NTSTIQLVVVATDTGNP 224
              T+     V+ATD G P
Sbjct: 1170 RGTAVFSFTVIATDQGIP 1187



 Score = 54.3 bits (129), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 64/228 (28%), Positives = 99/228 (43%), Gaps = 43/228 (18%)

Query: 45   FSKNEYSVSALENLPV--NYVLLTVTTNKPR--DLRVKYWL-SNDYGERFSISRQGDISL 99
            F  + YSV+  ENL      +L  V  +  R  + ++ Y L   +    F++S  G++ +
Sbjct: 2206 FELSPYSVNVPENLGTLPRTILQVVARDDDRGSNSKLSYVLFGGNEDNAFTLSASGELGV 2265

Query: 100  MQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
             Q LD ET++ +   + ATD+    +T + T+N+ V +VND  P F    Y   +P    
Sbjct: 2266 TQSLDRETKERFVLMITATDSGSPALTGTGTINVIVDDVNDNVPTFASKAYFTTIPE--- 2322

Query: 157  ADLTPGSVIGKVEAADGDKGDRVTLSLR---GPYEKMFSINDS-GHI---SIVDLSALNT 209
             D   G+ +  V A+D D      +S R   G     F+IN S G I   +++D    + 
Sbjct: 2323 -DAPTGTDVLLVNASDADASKNAVISYRIIGG--NSQFTINPSTGQIITSALLDRETKDN 2379

Query: 210  STIQLVVVATDTG--------------------NPPRQASVPAIMHFP 237
             T  LVVV +D G                    NPPR    P + H P
Sbjct: 2380 YT--LVVVCSDAGSPEPLSSSTSVLVTVTDVNDNPPRFQHHPYVTHIP 2425



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 56/190 (29%), Positives = 95/190 (50%), Gaps = 15/190 (7%)

Query: 56   ENLPVNYVLLTVTTNKPRDLRVKYWL-SNDYGERFSISR-QGDISLMQCLDYETEDSYRF 113
            EN PV+ ++ T+T +  R   + Y++ S + G  F I +  G +S+ Q LD+E    Y  
Sbjct: 2527 ENQPVSSLVTTITGSSLRGEPMSYYIASGNLGNTFQIDQLTGQVSISQPLDFEKIQKYVV 2586

Query: 114  TVYATDTL---MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEA 170
             + A D      ++   ++I+V++VND  P F+    + F+  I L +L+P  ++  V A
Sbjct: 2587 WIEARDGGFPPFSSYEKLDITVLDVNDNAPIFK---EDPFISEI-LENLSPRKIL-TVSA 2641

Query: 171  ADGDKGDRVTLS---LRGPYEKMFSINDS-GHI-SIVDLSALNTSTIQLVVVATDTGNPP 225
             D D G    L    + G  E  FSIN + G I S+  L     S   L + ++D G+P 
Sbjct: 2642 MDKDSGPNGQLDYEIVNGNMENSFSINHATGEIRSVRPLDREKVSHYVLTIKSSDKGSPS 2701

Query: 226  RQASVPAIMH 235
            +  SV  +++
Sbjct: 2702 QSTSVKVMIN 2711



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/101 (32%), Positives = 48/101 (47%), Gaps = 5/101 (4%)

Query: 77   VKYWLSNDYGERFSIS-RQGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNV 135
            V Y + +   + F I    GD+   + LD E    Y   V A D L ++   +NI+V +V
Sbjct: 1775 VTYTIISGADDSFRIDPESGDLIATRRLDRERRSKYSLLVRADDGLQSSDMRINITVSDV 1834

Query: 136  NDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG 176
            ND  P+F  P Y   +P     D  PGS++  + A D D G
Sbjct: 1835 NDHTPKFSRPVYSFDIPE----DTIPGSLVAAILATDDDSG 1871



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 53/185 (28%), Positives = 89/185 (48%), Gaps = 18/185 (9%)

Query: 62   YVLLTVTTNKPRDLRVKYWL-SNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATD- 119
            Y +LTV      + ++ Y + S D   +F++ + G + +++ LD E++  Y   V   D 
Sbjct: 1911 YYILTVRAEDGINSQLTYSIASGDSLGQFTVDKNGVLKVLKALDRESQSFYNLVVQVHDL 1970

Query: 120  -----TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTP-GSVIGKVEAADG 173
                 +  T++A V+I +++VND  P F  P+    L +IP  + TP  +V+ K +A D 
Sbjct: 1971 PQIPASRFTSTAQVSIILLDVNDNPPTFLSPK----LTYIP--ENTPIDTVVFKAQATDP 2024

Query: 174  DKG--DRVTLSLRGPYEKMFSIND-SGHISIV-DLSALNTSTIQLVVVATDTGNPPRQAS 229
            D G    +  +L  P    FSI    G + +  +L     S   L VVATD G P   +S
Sbjct: 2025 DSGPNSYIEYTLLNPLGNKFSIGTIDGEVRLTGELDREEVSNYTLTVVATDKGQPSLSSS 2084

Query: 230  VPAIM 234
               ++
Sbjct: 2085 TEVVV 2089



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 58/192 (30%), Positives = 90/192 (46%), Gaps = 24/192 (12%)

Query: 50   YSVSALENLPVNYVLLTVTTNKPRDLRV----KYWLSNDYGERFSIS-RQGDISLMQCLD 104
            +S    EN P+ Y +  VTT+   D+ +    +Y +  D    F+I+   GDI + + L+
Sbjct: 2726 FSAHVPENSPLGYTVTRVTTSD-EDIGINAISRYSIM-DASLPFTINPSTGDIVISRPLN 2783

Query: 105  YETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSV 164
             E  D YR  V A D+  T S  V I V ++ND  PRF    Y L  P   L ++  GS 
Sbjct: 2784 REDTDRYRIRVSAHDSGWTVSTDVTIFVTDINDNAPRFSRTSYYLDCPE--LTEI--GSK 2839

Query: 165  IGKVEAADGDKGD--RVTLSLRGPYEKMFSIN-DSGHI---------SIVDLSALNTSTI 212
            + +V A D D+G   +V   ++   E  F IN  +G I         ++   S +N +  
Sbjct: 2840 VTQVFATDPDEGSNGQVFYFIKSQSE-YFRINATTGEIFNKQILKYQNVTGFSNVNINRH 2898

Query: 213  QLVVVATDTGNP 224
              +V ++D G P
Sbjct: 2899 SFIVTSSDRGKP 2910



 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 51/193 (26%), Positives = 97/193 (50%), Gaps = 12/193 (6%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRDLR--VKYWLS-NDYGERFSISR-QGDISLM 100
           FS+  YS    EN+ + Y + +V+ +   DL   + Y ++  D    F+I++  G ++  
Sbjct: 793 FSQVAYSFVVFENVALGYHVGSVSAST-MDLNSNISYLITTGDQKGMFAINQVTGQLTTA 851

Query: 101 QCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLT 160
             +D E +  Y+  V A+   +T    VNI+V ++ND  P F      + +    + +  
Sbjct: 852 NVIDREEQSFYQLKVVASGGTVTGDTMVNITVKDLNDNSPHFLQAIESVNV----VENWQ 907

Query: 161 PGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIND-SGHISIVDLSALNTSTIQLVVV 217
            G  I + +A D D+G    V  SL+   + +F+IN+ +G IS++    ++  + Q+ ++
Sbjct: 908 AGHSIFQAKAVDPDEGVNGMVLYSLKQNPKNLFAINEKNGTISLLGPLDVHAGSYQIEIL 967

Query: 218 ATDTGNPPRQASV 230
           A+D G P   +SV
Sbjct: 968 ASDMGVPQLSSSV 980



 Score = 51.6 bits (122), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 73/237 (30%), Positives = 104/237 (43%), Gaps = 22/237 (9%)

Query: 11  ITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNE-YSVSALENLPVNYVLLTVTT 69
           I L + A       + + A L+V+    +  +  FS+ E Y VS +EN P    LL +  
Sbjct: 548 IVLNISARDQGVHPKVSYAQLVVTLLDVNDEKPVFSQPEGYDVSVVENAPTGTELLMLRA 607

Query: 70  NKPRDL----RVKYWLSNDYGERFSISR---QGDISLMQCLDYETEDSYRFTVYATD--- 119
               DL     V++ L     +R S       G +S +  LD E +  Y   V ATD   
Sbjct: 608 TD-GDLGDNGTVRFSLQEAETDRRSFRLDPVSGRLSTISSLDREEQAFYSLLVLATDLGS 666

Query: 120 TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRV 179
              ++ A +N+S++++ND  P F   QY     HI   +   GS I  V A D D G   
Sbjct: 667 PPQSSMARINVSLLDINDNSPVFYPVQY---FAHIK-ENEPGGSYITTVSATDPDLGTNG 722

Query: 180 TL--SLRGPYEKMFSIN-DSGHISI-VDLSALNTSTIQLVVVATDTGN--PPRQASV 230
           T+  S+       F +N  SG IS  + L     +  QL +VATD GN   P QA V
Sbjct: 723 TVKYSISAGDRSRFQVNAQSGVISTRMALDREEKTAYQLQIVATDGGNLQSPNQAIV 779



 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 48/149 (32%), Positives = 69/149 (46%), Gaps = 12/149 (8%)

Query: 95   GDISLMQCLDYETEDSYRFTVYATDTL----MTTSATVNISVVNVNDWDPRFRYPQYELF 150
            G I     LD ET+D+Y   V  +D      +++S +V ++V +VND  PRF   Q+  +
Sbjct: 2364 GQIITSALLDRETKDNYTLVVVCSDAGSPEPLSSSTSVLVTVTDVNDNPPRF---QHHPY 2420

Query: 151  LPHIPLADLTPGSVIGKVEAADGDKGDRVTL--SLRGPYEKMFSINDSGHISIVDLSALN 208
            + HIP   L PGS +  V   D D G    L  SL G   + F I D    +I+    LN
Sbjct: 2421 VTHIPSPTL-PGSFVFAVTVTDADIGPNSELHYSLSGRNSEKFHI-DPLRGAIMAAGPLN 2478

Query: 209  -TSTIQLVVVATDTGNPPRQASVPAIMHF 236
              S +   V   D G+ P+  S    + F
Sbjct: 2479 GASEVTFSVHVKDGGSFPKTDSTTVTVRF 2507



 Score = 45.1 bits (105), Expect = 0.066,   Method: Compositional matrix adjust.
 Identities = 44/161 (27%), Positives = 74/161 (45%), Gaps = 16/161 (9%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGERFSIS-RQGDISLM 100
            F  ++Y  + LEN P    ++ +     +   +  + Y + +   + F I    G I+  
Sbjct: 3143 FLSDDYFPTVLENAPSGTTVIHLNATDADSGTNAVIAYTVQSSDSDLFVIDPNTGVITTQ 3202

Query: 101  QCLDYETEDSYRFTVYA---TDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLA 157
              LD+ET+ SY  TV A    D    + ATVNI +   N++ PRF    Y     +  ++
Sbjct: 3203 GFLDFETKQSYHLTVKAFNVPDEERCSFATVNIQLKGTNEYVPRFVSKLY-----YFEIS 3257

Query: 158  DLTP-GSVIGKVEAAD---GDKGDRVTLSLRGPYEKMFSIN 194
            +  P G+++G+V A+D   G  G+   L      +K F IN
Sbjct: 3258 EAAPKGTIVGEVFASDRDLGTDGEVHYLIFGNSRKKGFQIN 3298



 Score = 40.8 bits (94), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 55/108 (50%), Gaps = 7/108 (6%)

Query: 89   FSISRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYP 145
            FS+S  G +S  + +D E    +  +V   D+    M+++ TV+I+V++ ND   + R  
Sbjct: 3507 FSLSTAGVLSTTREIDREQIADFYLSVVTKDSGVPQMSSTGTVHITVIDQNDNPSQSR-- 3564

Query: 146  QYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSI 193
              E+F+ +    +L PG ++G V+  D D  D    SL      +FSI
Sbjct: 3565 TVEIFVNY--YGNLFPGGILGSVKPQDPDVLDSFHCSLTSGVTSLFSI 3610


>gi|403295797|ref|XP_003938812.1| PREDICTED: cadherin-17 [Saimiri boliviensis boliviensis]
          Length = 832

 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 73/295 (24%), Positives = 128/295 (43%), Gaps = 37/295 (12%)

Query: 14  VVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPR 73
           +V  + Y N+  +A  TLIV+    +    QF ++ +     E++ +   +  VT   P 
Sbjct: 539 LVFGVMY-NESSFAKFTLIVTDVNEAP---QFPQHVFQAKVSEDVAIGTKVGNVTAKDPE 594

Query: 74  DLRVKYWLSNDYGERFSISR-QGDISLMQCLDYETEDSYRFTVYATDTLMTTSAT---VN 129
            L ++Y L  D      I    G+I  +  LD E    YR  V AT+   ++ ++    +
Sbjct: 595 GLDIRYSLRGDTRGWLKIDHVTGEIFSVAPLDREAGSPYRVQVVATEVGGSSLSSVSEFH 654

Query: 130 ISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEK 189
           +++ +VND  PR       LF  H PL+   PGS+I   EA D D+      SLRGP+  
Sbjct: 655 LTLSDVNDNPPRLAKEYTGLFFCH-PLS--APGSLI--FEATDDDQP-----SLRGPH-F 703

Query: 190 MFSINDSGHISIVDLSALNTSTIQL--------------VVVATDTGNPPRQASVPAIMH 235
            FS+      +  ++S +N +  +L              ++   D G PP +  V   + 
Sbjct: 704 TFSLASGNLENDWEVSKINGTHARLSTRHTSFEEREYIVLIRINDGGRPPLEGIVSLPVT 763

Query: 236 FPEAI----VQQASSKLNSGTSSTVLIILGVVLIVLGFVIILLILYIHKNKHTKN 286
           F   +     + A  +    T    + IL   L+V+G ++ ++ + + K+K   N
Sbjct: 764 FCTCVEGSCFRPAGHQPGIPTVGMAVGILLTTLLVIGIILAVVFIRMKKDKGKDN 818


>gi|262263291|tpg|DAA06591.1| TPA_inf: protocadherin beta 14 [Anolis carolinensis]
          Length = 806

 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 51/152 (33%), Positives = 77/152 (50%), Gaps = 18/152 (11%)

Query: 92  SRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYP-QY 147
           S  G++  ++ LDYE    ++ TV ATD     +++ A V + V++ ND  P F YP Q 
Sbjct: 505 SETGNMYALRSLDYEQIKDFKITVRATDGGIPSLSSDAFVRVMVIDENDNPPFFLYPLQN 564

Query: 148 ELFLPHIPLADLTP-----GSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-DSGH 198
             F    P  +L P     G +I KV A DGD G    LS   L+     +FSI   +G 
Sbjct: 565 STF----PCNELLPKMAEGGYLITKVVAVDGDSGQNSWLSYEILKATDPGLFSIGAQNGE 620

Query: 199 ISIVD-LSALNTSTIQLVVVATDTGNPPRQAS 229
           +     L+  ++S  +LV+VA D G PP+ ++
Sbjct: 621 VKTRRPLTERDSSKQRLVIVAKDNGVPPQTST 652



 Score = 44.3 bits (103), Expect = 0.097,   Method: Compositional matrix adjust.
 Identities = 53/207 (25%), Positives = 99/207 (47%), Gaps = 27/207 (13%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVK----YWLSNDYGERFSISRQGDISLM 100
           FSK ++ +   EN+P N +   + + +  DL       Y LS++   +  +    D S+ 
Sbjct: 129 FSKQKFDLEVPENVPRN-MRFPLESAQDEDLGQNSIQNYTLSSNEHFKLGVENNTDGSIY 187

Query: 101 ------QCLDYETEDSYRFTVYATDTLM---TTSATVNISVVNVNDWDPRFRYPQYELFL 151
                 + LD E E  +  T+ A D  +   T +  +NI V+++ND  P F   +Y+   
Sbjct: 188 VDLIVEKALDREKEPFFGLTLMAVDGGIPQRTGTVQINIKVLDINDNSPHFTQSEYK--- 244

Query: 152 PHIPLADLTP-GSVIGKVEAADGDKGD--RVTLSL-RGPYE--KMFSIND-SGHISIV-D 203
             + L + +P  +++ KVEA D D G   ++T S  R P +   +F++N+ +G I ++ +
Sbjct: 245 --VRLKENSPRNTLVTKVEARDLDFGSNAQITYSFHRVPKKILNLFNLNEMTGEIIVLGE 302

Query: 204 LSALNTSTIQLVVVATDTGNPPRQASV 230
           +     ++  + + ATD G    Q  V
Sbjct: 303 IDYEKETSYDMSIKATDDGGLSGQCKV 329



 Score = 37.7 bits (86), Expect = 9.2,   Method: Compositional matrix adjust.
 Identities = 40/153 (26%), Positives = 62/153 (40%), Gaps = 34/153 (22%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGERFSISRQ--------- 94
            F+++EY V   EN P N +   VT  + RDL        D+G    I+           
Sbjct: 237 HFTQSEYKVRLKENSPRNTL---VTKVEARDL--------DFGSNAQITYSFHRVPKKIL 285

Query: 95  ---------GDISLMQCLDYETEDSYRFTVYATDT-LMTTSATVNISVVNVNDWDPRFRY 144
                    G+I ++  +DYE E SY  ++ ATD   ++    V++ V +VND  P    
Sbjct: 286 NLFNLNEMTGEIIVLGEIDYEKETSYDMSIKATDDGGLSGQCKVSVEVEDVNDNAPEVSI 345

Query: 145 PQYELFLPHIPLADLTPGSVIGKVEAADGDKGD 177
              +  +P     D    +V+      D D GD
Sbjct: 346 ISLKNIIPE----DSPLEAVVALFSVRDKDSGD 374


>gi|194389438|dbj|BAG61685.1| unnamed protein product [Homo sapiens]
          Length = 897

 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 68/216 (31%), Positives = 99/216 (45%), Gaps = 20/216 (9%)

Query: 45  FSKNEYSVSALENLPVNYV--LLTVTTNKPRDLRVKYWLSNDYGERFSISRQ-GDISLMQ 101
           F+ NEY+    ENLP +    L+TVT     D         D  + F+I  Q G I    
Sbjct: 599 FTHNEYNFYVPENLPRHGTVGLITVTDPDYGDNSAVTLSILDENDDFTIDSQTGVIRPNI 658

Query: 102 CLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYP----QYELFLPHI 154
             D E ++SY F V A D      ++SA V I+VV+VND  P F  P     YEL LP  
Sbjct: 659 SFDREKQESYTFYVKAEDGGRVSRSSSAKVTINVVDVNDNKPVFIVPPSNCSYELVLPST 718

Query: 155 PLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-DSGHISIVDLSALNTS 210
                 PG+V+ +V A D D G    +    + G    +F+I+ ++G+I+++    +   
Sbjct: 719 -----NPGTVVFQVIAVDNDTGMNAEVRYSIVGGNTRDLFAIDQETGNITLMGKCDVTDL 773

Query: 211 TIQLVVV-ATDTGNPPRQASVPAIMHFPEAIVQQAS 245
            +  V+V A D G P    SV  +  F    V  A+
Sbjct: 774 GLHRVLVKANDLGQPDSLFSVVIVNLFVNESVTNAT 809



 Score = 57.8 bits (138), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 37/114 (32%), Positives = 61/114 (53%), Gaps = 10/114 (8%)

Query: 76  RVKYWLSNDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNIS 131
           ++ Y L  D    FS+  R G +++++ LD E ED Y FT+ A D     +T++ TV +S
Sbjct: 529 KINYLLGPDAPPEFSLDCRTGMLTVVKKLDREKEDKYLFTILAKDNGVPPLTSNVTVFVS 588

Query: 132 VVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDR--VTLSL 183
           +++ ND  P F + +Y  ++P     +L     +G +   D D GD   VTLS+
Sbjct: 589 IIDQNDNSPVFTHNEYNFYVPE----NLPRHGTVGLITVTDPDYGDNSAVTLSI 638



 Score = 38.1 bits (87), Expect = 6.4,   Method: Compositional matrix adjust.
 Identities = 36/139 (25%), Positives = 67/139 (48%), Gaps = 15/139 (10%)

Query: 103 LDYETEDSYRFTVYATDTLM---TTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADL 159
           LD E +D+Y   V   D      +++A + +SV + ND  P F+  + E+ +P     + 
Sbjct: 236 LDREEKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVFKETEIEVSIPE----NA 291

Query: 160 TPGSVIGKVEAADGDKGDRVTLS------LRGPYEKMFSIN-DSGHISIVD-LSALNTST 211
             G+ + ++ A D D G+   +       +     ++F +N  +G I+I + L    T  
Sbjct: 292 PVGTSVTQLHATDADIGENAKIHFSFSNLVSNIARRLFHLNATTGLITIKEPLDREETPN 351

Query: 212 IQLVVVATDTGNPPRQASV 230
            +L+V+A+D G  P +A V
Sbjct: 352 HKLLVLASDGGLMPARAMV 370


>gi|432922377|ref|XP_004080322.1| PREDICTED: protocadherin-15-like [Oryzias latipes]
          Length = 2269

 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 51/165 (30%), Positives = 82/165 (49%), Gaps = 13/165 (7%)

Query: 73  RDLRVKYWLSNDYGERFSISRQG---DISLMQCLDYETEDSYRFTVYATDTLMTTS-ATV 128
           RD ++++ L + Y + FS+S  G    ++L+Q +D ET+DSY FT+ A+D +  ++  TV
Sbjct: 461 RDPQLQFSL-DSYSDVFSVSASGIRRYLTLVQPVDRETQDSYTFTLLASDGVQQSAPVTV 519

Query: 129 NISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR---G 185
            +SV++ ND  P F    Y + L      ++ PG  + ++ A D D G    +S R   G
Sbjct: 520 TVSVLDANDNTPTFSNVSYTINL----FTNMMPGETVLQLTAVDPDAGQNGEISYRILAG 575

Query: 186 PYEKMFSINDSGHISIVDLSALNTST-IQLVVVATDTGNPPRQAS 229
              K    + SG I++     L       L V A D G  P + S
Sbjct: 576 GLGKFHLDSSSGIITVAPGVQLTVGQRYALTVEAMDNGPAPHRRS 620



 Score = 48.9 bits (115), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 53/208 (25%), Positives = 94/208 (45%), Gaps = 30/208 (14%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYW-------LSNDYGERFSISR-QGD 96
            FS+  Y V+  EN P + V+L +    P DL            L  +  E F +    G+
Sbjct: 843  FSQQSYHVNLPENSPKDTVILQLKATDP-DLNSNLMYRIGTESLDPEITELFYVHPITGE 901

Query: 97   ISLMQCLDYE----TEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYEL 149
            + +++ LD+E    ++ ++  TV A D    +    A+V + ++++ND+ P F  P Y+ 
Sbjct: 902  LVVLRALDFEALNKSDATFTLTVEAVDMEGAMPPGVASVTVRIMDMNDFSPEFSQPLYQG 961

Query: 150  FLPHIPLADLTPGSVIGKVEAADGDKGD--------RVTLSLRGPYEKMFSI-NDSGH-I 199
             +      +   G+++  V A+D D           RV    R     +F +  ++GH I
Sbjct: 962  MV----APNAVKGTIVTTVLASDADPAGTPAGLVNYRVDQQTRSYSATIFDVEKETGHVI 1017

Query: 200  SIVDLSALNTSTIQLVVVATDTGNPPRQ 227
            + V+L+        LVVVA D G P ++
Sbjct: 1018 TRVNLNEEPNLKFSLVVVAYDHGEPVKE 1045



 Score = 48.9 bits (115), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 58/195 (29%), Positives = 92/195 (47%), Gaps = 14/195 (7%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWL-SNDYGERFSISRQ-GDISLMQ 101
           +F + +Y++   E +     LL +         + Y + S D    F + ++ G + L  
Sbjct: 639 RFPRQQYNLEISEAMRTEATLLNLQAVDREMDPITYQIQSGDVTGSFLLQQKSGSLVLSS 698

Query: 102 CLDYETEDSYRFTVYATDTL--MTTSATVNISVVNVNDWDPRFRYPQYELFLP-HIPLAD 158
            LD E+ D Y   V A+D     T++A VNI V +VND DP F        LP ++ + +
Sbjct: 699 PLDRESLDYYSLVVTASDGHPDGTSTAIVNIVVTDVNDNDPVFNSS-----LPVNLSVTE 753

Query: 159 LTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDSGHISI-VDLSALNTSTIQLV 215
               + +G+V+A D D G   +V   L   Y+ +FSIN SG I+  V L         LV
Sbjct: 754 EENHAFVGQVKATDPDLGANGQVHYQLIN-YQTLFSINASGFITTAVPLDREVKGHYGLV 812

Query: 216 VVATDTGNPPRQASV 230
           V A+D    PR++ +
Sbjct: 813 VEASDGAVDPRRSRL 827


>gi|345308451|ref|XP_003428695.1| PREDICTED: protocadherin Fat 4-like, partial [Ornithorhynchus
           anatinus]
          Length = 563

 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/153 (32%), Positives = 73/153 (47%), Gaps = 15/153 (9%)

Query: 88  RFSISRQGDISLMQCLDYETEDSYRFTVYATD------TLMTTSATVNISVVNVNDWDPR 141
           +FS+ R+G +   + LD E++  Y   V A D      T +T SA V++ +++VND  PR
Sbjct: 17  QFSVDREGVLRTRRALDRESQSFYNLVVQAHDLAPPPATRLTASAQVSVVLLDVNDNPPR 76

Query: 142 FRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIND-SGH 198
           F  P    ++P    AD    +V+ + EA D D G    V  SL G     F +    G 
Sbjct: 77  FVSPNL-TYVPENTPAD----TVVFRAEATDADSGPNSYVEYSLAGEGAPAFRVGTVDGE 131

Query: 199 ISIVD-LSALNTSTIQLVVVATDTGNPPRQASV 230
           + +V  L     + + + VVATD G P   AS 
Sbjct: 132 VRLVGPLDREEAAELAVTVVATDKGGPALSASA 164



 Score = 52.0 bits (123), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 49/163 (30%), Positives = 80/163 (49%), Gaps = 13/163 (7%)

Query: 77  VKYWLSNDYGERFSISR-QGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISV 132
           V+Y L+ +    F +    G++ L+  LD E       TV ATD     ++ SA V + V
Sbjct: 111 VEYSLAGEGAPAFRVGTVDGEVRLVGPLDREEAAELAVTVVATDKGGPALSASAEVRVVV 170

Query: 133 VNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSL-RGPYEK 189
           ++VND DP F    YE+ +    LA    G+ + +V A+D D+G    V  +L  G  ++
Sbjct: 171 LDVNDNDPVFSRGAYEVEVEEGALA----GTDLLRVSASDADEGPNGEVRYALVAGAADR 226

Query: 190 MFSIND-SGHISIVD-LSALNTSTIQLVVVATDTGNPPRQASV 230
            F ++  +G +S+   L     +  +L V A+D G  PR A+ 
Sbjct: 227 EFRLDSVTGVLSVGGPLDREEKAEYRLTVQASDRGGSPRTATA 269



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 59/190 (31%), Positives = 91/190 (47%), Gaps = 15/190 (7%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYGER-FSI-SRQGDISL 99
           FS+  Y V   E       LL V+    ++  +  V+Y L     +R F + S  G +S+
Sbjct: 180 FSRGAYEVEVEEGALAGTDLLRVSASDADEGPNGEVRYALVAGAADREFRLDSVTGVLSV 239

Query: 100 MQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
              LD E +  YR TV A+D   +  T +A V + + +VND+ P F    Y L +P    
Sbjct: 240 GGPLDREEKAEYRLTVQASDRGGSPRTATALVAVLLGDVNDFAPVFDPSPYSLDVPEN-- 297

Query: 157 ADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEK-MFSINDSGHISIV-DLSALNTSTI 212
              +P +V+ +V A D D+G   ++T SL G  E   F+++ SG + +V  L        
Sbjct: 298 GRDSPRTVL-QVVARDDDQGVNSQLTYSLAGGNEDTAFTLSSSGELRLVRSLDRETKDRF 356

Query: 213 QLVVVATDTG 222
            L+V ATD G
Sbjct: 357 VLIVTATDGG 366


>gi|334311077|ref|XP_003339577.1| PREDICTED: protocadherin beta-3-like [Monodelphis domestica]
          Length = 795

 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 56/200 (28%), Positives = 96/200 (48%), Gaps = 16/200 (8%)

Query: 92  SRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYE 148
           S  G + +++ LDYE   +++FTV ATD     +++ A V + V++ ND  P   YP   
Sbjct: 507 SDNGHLYILRSLDYEAIQAFQFTVTATDGGSPALSSQALVQVVVLDENDNTPFVLYPLQN 566

Query: 149 LFLPH---IPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSI-NDSGHISI 201
              P    +P A   PG ++ KV A DGD G    LS   L+     +F++   +G +  
Sbjct: 567 GTAPCNDLVPRA-AEPGYLVTKVVAVDGDSGQNSWLSYQLLKATDPGLFTVWAHNGEVCT 625

Query: 202 VD-LSALNTSTIQLVVVATDTGNPPRQA----SVPAIMHFPEAIVQQASSKLNSGTSSTV 256
              +S  + +  +L+V+  D G PP+ A    +V  +  F E  +Q   +        ++
Sbjct: 626 ARPISDRDATKQRLLVLVKDNGEPPQSAVATLNVLLVDGFSEPYLQLPDAPKEQVQVDSL 685

Query: 257 LIILGVVLIVLGFVIILLIL 276
            I L + L V+ F+ ++ IL
Sbjct: 686 TIYLIISLAVISFLFLISIL 705



 Score = 45.4 bits (106), Expect = 0.051,   Method: Compositional matrix adjust.
 Identities = 43/137 (31%), Positives = 60/137 (43%), Gaps = 21/137 (15%)

Query: 103 LDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADL 159
           LD E+   Y  T+  TD     +TT   + + + +VND  P F    Y  +L      + 
Sbjct: 408 LDRESRSQYNITITVTDLGTPRLTTERNITVLISDVNDNPPAFTQTAYAFYLQE----NN 463

Query: 160 TPGSVIGKVEAADGDKGD--RVTLSLRGPYE------KMFSIN-DSGHISIVDLSALNTS 210
            P    G V A D D G   ++T S + P           SIN D+GH+ I  L +L+  
Sbjct: 464 IPALHFGSVRANDRDSGTNAKITYSFQSPVTGDLPLFSYISINSDNGHLYI--LRSLDYE 521

Query: 211 TI---QLVVVATDTGNP 224
            I   Q  V ATD G+P
Sbjct: 522 AIQAFQFTVTATDGGSP 538



 Score = 40.4 bits (93), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 55/234 (23%), Positives = 99/234 (42%), Gaps = 19/234 (8%)

Query: 5   DDFLQP-ITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYV 63
           D  +QP +TL + A+   +  R   A + V     +     FS+ +Y V   EN  +  +
Sbjct: 200 DREMQPEVTLTLIALDGGSPPRSGAAQIRVLVVDVNDNAPVFSQAQYDVQIPENGAIGSL 259

Query: 64  LLTVTTNK---PRDLRVKYWL---SNDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVY 116
           + TVT        + ++ Y     S +    F + S  GDI   + LD+E   SY   + 
Sbjct: 260 VATVTATDLDIGNNGQISYSFFQGSEEIVSTFEVNSTSGDIRTRRKLDFEAIKSYEVDIE 319

Query: 117 ATD-TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDK 175
           ATD   ++   TV + V +VND  P      +       P+ + +P +++  ++  D D 
Sbjct: 320 ATDGGGLSGKCTVVVQVTDVNDNAPELAISSFT-----SPIPENSPETLVAVLKIRDQDS 374

Query: 176 GD--RVTLSLRGPYEKMFSINDSGHISIVDLSALN---TSTIQLVVVATDTGNP 224
           GD  ++  S+ G    +   +     +++  S L+    S   + +  TD G P
Sbjct: 375 GDNGKMVCSIEGNVPFILKPSVDNFYTLLTESPLDRESRSQYNITITVTDLGTP 428


>gi|195111232|ref|XP_002000183.1| GI22667 [Drosophila mojavensis]
 gi|193916777|gb|EDW15644.1| GI22667 [Drosophila mojavensis]
          Length = 1982

 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 58/194 (29%), Positives = 95/194 (48%), Gaps = 20/194 (10%)

Query: 55   LENLPVNYVLLTVTTNKPRDLRVKYWL-SNDYGERFSISRQ-GDISLMQCLDYETEDSYR 112
            +E  PV  VL T+  +       ++ + +NDY   F+I+   G I     LDYE     +
Sbjct: 1018 VEEQPVGTVLTTLQASDEDSSIGEFNITANDY---FAINHTTGTIYTTARLDYEAVKEVK 1074

Query: 113  FTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTP-GSVIGKV 168
             T   +DT    +T +A + I ++N+ND +P F   +Y     +  + + +P G+V GKV
Sbjct: 1075 LTATVSDTGVPPLTATADIVIDIINLNDNEPHFTQAEY-----YFNITENSPRGTVAGKV 1129

Query: 169  EAADGDKG--DRVTLSLRGPYEKMFSIND-SGHISIVDLSALNTSTIQ---LVVVATDTG 222
            EA D D G    +T +L G   K FS++  +G++ + + S L+   ++   L VVA D  
Sbjct: 1130 EAHDSDVGAFGELTYTLIGENNKYFSVDAYTGNVMVANASILDREQLKELTLSVVAQDKA 1189

Query: 223  NPPRQASVPAIMHF 236
                Q S  A +H 
Sbjct: 1190 PATVQKSATATIHI 1203



 Score = 47.0 bits (110), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 63/229 (27%), Positives = 103/229 (44%), Gaps = 42/229 (18%)

Query: 11  ITLVVRAIQYDNQ----DRYALATLIVSKAGTSLREL-----QFSKNEYSVSALENLPVN 61
           I+LVVRA +  N     D    AT   ++A  ++R++     +F++ EY VS LEN P  
Sbjct: 318 ISLVVRAREVVNDVPSDDPLTSAT---ARATVTIRDVNDSPPKFNEKEYDVSLLENTPEG 374

Query: 62  YVLLTVTTNKPRDLRV--KYWLS-NDYGERFSIS-------RQGDISLMQ-CLDYETEDS 110
             L    +    D+ +  K+ L   D    F +         Q +I +    LDYE  + 
Sbjct: 375 TPLALDMSVSDADVGINSKFALRLEDVSGVFDVEPKLVTGYSQVNIRVANGTLDYENPNQ 434

Query: 111 YRFTVYA------TDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSV 164
            +F V        T+  ++++AT+ +SV++ ND  P F    Y   +    L    PG  
Sbjct: 435 RKFIVLVIAEETETNPKLSSAATITVSVLDANDNKPSFEQESYSATVSEAAL----PGQY 490

Query: 165 IGKVEAAD------GDKGDRVTLSLRGPYEKMFSIND-SGHISIVDLSA 206
           I  + A D      GD G R +LS  G   ++F +N+ +G I++ D  +
Sbjct: 491 ITTITAKDVDSSSFGDAGIRYSLS--GTGAELFHVNEQTGVITLGDCQS 537



 Score = 42.4 bits (98), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 42/134 (31%), Positives = 62/134 (46%), Gaps = 23/134 (17%)

Query: 102 CLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLAD 158
           CLDYETE +Y  +  ATD      T+  ++ ISV + ND  P    P Y         A 
Sbjct: 630 CLDYETETTYFLSYKATDDNGQGQTSVVSLRISVSDANDSPPVCESPLYR--------AS 681

Query: 159 LTPGSVIGK----VEAADGDKGDRVTLSLRGP--YEKMFSIND-SGHISI-----VDLSA 206
           +  GS++      V+A D D    ++  + G    E +F I+  SG ISI     +D++ 
Sbjct: 682 VDEGSLVFDSPLVVKARDADTMSSISYRIIGSPQIESIFDIDKRSGQISIRPNASLDVTN 741

Query: 207 LNTSTIQLVVVATD 220
           L +  +  VV A D
Sbjct: 742 LKSEQLIFVVEAND 755



 Score = 40.8 bits (94), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 30/105 (28%), Positives = 49/105 (46%), Gaps = 7/105 (6%)

Query: 45  FSKNEYSVSALENLPVNYV---LLTVTTNKPRDLRVKYWLSNDYGERFSI-SRQGDISLM 100
           F +  YS    EN  +      LL    +  ++  ++Y +       F I  R G++ + 
Sbjct: 778 FQQQNYSAVVEENSEIGTSVEKLLATDLDTGKNAELRYRIQQGSFNDFDIDERTGEVFVS 837

Query: 101 QCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRF 142
           + LDY+  ++Y   V A D     +T +AT+ I+V N ND DP F
Sbjct: 838 RKLDYDRRNTYHLQVQAADLGTPSLTGTATLTINVQNSNDKDPYF 882



 Score = 39.7 bits (91), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 60/242 (24%), Positives = 90/242 (37%), Gaps = 44/242 (18%)

Query: 28   LATLIVSKAGTSLRELQFSKNEYSVSALEN----LPVNYVLLTVTTNKPRDLRVKYWLSN 83
            L T+ +  A  +  E   + N Y VS  EN    + + ++     +   RD+     L N
Sbjct: 1420 LLTVSIVDANENRPEFPDASNPYKVSINENSGRDVKIGHIQAASRSKHNRDIFYYMLLGN 1479

Query: 84   DYGERFSISRQGDISLMQCLDYETEDSYRFTVYAT-----------------DTLM--TT 124
            + G  +     GDI   + LD E  D+Y   + A+                  TL    T
Sbjct: 1480 EDGAFYVDKLSGDIYTNKSLDREETDAYTLYILASIKADLHISEEERASFSIKTLNRDNT 1539

Query: 125  SATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDR------ 178
             A V I+V++VND  P F  P Y   +     A+    S I  V A D D+G        
Sbjct: 1540 VAKVAITVLDVNDNAPVFEKPVYYAGVN----ANAKMKSAITMVNATDADQGKNAKIEYM 1595

Query: 179  ----------VTLSLRGPYEKMFSINDSGHISIVDLSA-LNTSTIQLVVVATDTGNPPRQ 227
                       T S        F+I+  G I+   + A  N    +L +VA +   P R 
Sbjct: 1596 IVASNLYKFGATKSTGSIVPSPFAISQDGRITANTIMAEYNQDRFELEIVARELEQPQRS 1655

Query: 228  AS 229
            A+
Sbjct: 1656 AN 1657


>gi|60279655|ref|NP_001012500.1| protocadherin 15a precursor [Danio rerio]
 gi|57471174|gb|AAW50923.1| protocadherin 15a [Danio rerio]
          Length = 1796

 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 59/194 (30%), Positives = 96/194 (49%), Gaps = 12/194 (6%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTV-TTNKPRDLRVKYWLSNDYGERFSISRQ-GDISLMQ 101
           +F    Y++   E + +  +LL +  T++  D       + D  E F++SR  G + L +
Sbjct: 620 RFPLQTYNLEISEAMRIGAILLNLQATDRELDPITYRIETGDPQEVFNLSRTIGLLLLAK 679

Query: 102 CLDYETEDSYRFTVYATDTL--MTTSATVNISVVNVNDWDPRFRYPQYELFLP-HIPLAD 158
            LD ET D YR  V A+D      ++ATV+I + +VND DP F     +L LP ++ + +
Sbjct: 680 PLDRETIDQYRLIVTASDGHPGGISTATVSIVITDVNDNDPTF-----DLTLPRNLTVRE 734

Query: 159 LTPGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSINDSGHI-SIVDLSALNTSTIQLVV 216
                 +G+V A D D G    +  R   +  +FSIN +G I + V L     S   L+V
Sbjct: 735 EEANVFVGQVRATDPDGGLNGQVRYRLLSFASLFSINSTGSIFTAVPLDRETRSRYDLIV 794

Query: 217 VATDTGNPPRQASV 230
            A+D    PR+ ++
Sbjct: 795 EASDGAVDPRRTTI 808



 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 63/202 (31%), Positives = 100/202 (49%), Gaps = 28/202 (13%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDL--RVKYWLSNDYG-ERFSISR-QGDISLM 100
            FS+  Y+V+  EN P   ++L +T     DL   V Y +  +   + F+++R  G IS++
Sbjct: 824  FSQPVYTVNVPENTPAGSIILRLTAVD-ADLVSNVTYRIKTEAALQLFAVNRLTGVISVL 882

Query: 101  QCLDYET----EDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYE-LFLP 152
            Q LD+E+      +Y F V A D    L   +ATV++ + ++ND+ P FR   Y+ L  P
Sbjct: 883  QALDFESLAAGNSTYTFEVEALDHGGVLPPGTATVSVRITDMNDFSPVFRQALYKGLVAP 942

Query: 153  HIPLADLTPGSVIGKVEAADGDKGDRVTLSLR-------GPYE-KMFSIN-DSGH-ISIV 202
            +        G+VI  V A D D        +R        PY   +F +  D+G  I+ V
Sbjct: 943  NA-----EKGTVITTVLAEDQDPPGTPASKVRYRVDQELSPYSGSIFDVETDTGLVITKV 997

Query: 203  DLSALNTSTIQLVVVATDTGNP 224
            +L+   T+  +LVV+A D G P
Sbjct: 998  NLNEQPTTVFKLVVMAYDDGEP 1019



 Score = 48.5 bits (114), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 51/167 (30%), Positives = 81/167 (48%), Gaps = 17/167 (10%)

Query: 76  RVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDTLM---TTSATVNISV 132
           +V+Y L + +   FSI+  G I     LD ET   Y   V A+D  +    T+ T+ + V
Sbjct: 756 QVRYRLLS-FASLFSINSTGSIFTAVPLDRETRSRYDLIVEASDGAVDPRRTTITLLVEV 814

Query: 133 VNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYE-KMF 191
           +++ND  P F  P Y + +P     +   GS+I ++ A D D    VT  ++     ++F
Sbjct: 815 LDINDNSPVFSQPVYTVNVPE----NTPAGSIILRLTAVDADLVSNVTYRIKTEAALQLF 870

Query: 192 SIND-SGHISI---VDLSAL--NTSTIQLVVVATDTGN--PPRQASV 230
           ++N  +G IS+   +D  +L    ST    V A D G   PP  A+V
Sbjct: 871 AVNRLTGVISVLQALDFESLAAGNSTYTFEVEALDHGGVLPPGTATV 917



 Score = 44.3 bits (103), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 68/132 (51%), Gaps = 11/132 (8%)

Query: 51  SVSALENL--PVNYVLLTVTTNKPRDLRVKYWLSNDYGERFSISRQGD---ISLMQCLDY 105
           ++SA  NL  P+  + L     + +D ++K  L N+Y   F+I+  G    ++L++ +D 
Sbjct: 418 TISASANLTAPLAIIALDNDIEETKDPQLKITL-NEYTSIFTITTSGITRFLTLLKPVDR 476

Query: 106 ETEDSYRFTVYATDTLMTTS-ATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSV 164
           E + +Y  T+ ATD +  +   TV+I V++ ND  P F    Y + +      ++ PG  
Sbjct: 477 EIQTNYTLTLVATDGVQQSRPVTVDILVIDANDNTPTFAQVSYSVEI----FTNMLPGET 532

Query: 165 IGKVEAADGDKG 176
           + ++ A D D G
Sbjct: 533 VLQLMAQDADAG 544


>gi|397518010|ref|XP_003829193.1| PREDICTED: protocadherin beta-9 [Pan paniscus]
          Length = 797

 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 73/152 (48%), Gaps = 14/152 (9%)

Query: 95  GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFL 151
           G +  ++ LDYE   ++ F V ATD     +++ A V + V++ ND  P   YP      
Sbjct: 511 GHLFALRSLDYEALQAFEFRVGATDRGSPALSSEALVRVLVLDANDNSPFVLYPLQNGSA 570

Query: 152 PH---IPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSI-NDSGHISIVD- 203
           P    +P A   PG V+ KV A DGD G    LS   L+     +F +   +G +     
Sbjct: 571 PCTELVPRA-AEPGYVVTKVVAVDGDSGQNAWLSYQLLKATEPGLFGVWAHNGEVRTARL 629

Query: 204 LSALNTSTIQLVVVATDTGNPPRQASVPAIMH 235
           LS  + +  +LVV+  D G PPR A+  A +H
Sbjct: 630 LSERDAAKHRLVVLVKDNGEPPRSAT--ATLH 659



 Score = 48.5 bits (114), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 45/138 (32%), Positives = 65/138 (47%), Gaps = 21/138 (15%)

Query: 102 CLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLAD 158
            LD E++  Y  T+  TD     + T  ++ + V +VND  P F    Y LF+      +
Sbjct: 408 ALDRESKAEYNITITVTDLGTPRLKTEHSITLQVSDVNDNAPAFTQTSYTLFVRE----N 463

Query: 159 LTPGSVIGKVEAADGDKGD--RVTLSLRGPYE------KMFSIN-DSGH---ISIVDLSA 206
            +P   +G V A DGD G   +VT SL  P +       + SIN D+GH   +  +D  A
Sbjct: 464 NSPALHVGSVSATDGDSGTNAQVTYSLLPPQDPHLPLTSLVSINADNGHLFALRSLDYEA 523

Query: 207 LNTSTIQLVVVATDTGNP 224
           L     +  V ATD G+P
Sbjct: 524 LQ--AFEFRVGATDRGSP 539



 Score = 42.0 bits (97), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 50/200 (25%), Positives = 90/200 (45%), Gaps = 32/200 (16%)

Query: 3   NEDDFLQPITLVVRAIQYDNQDRYALATLIV-----SKAGTSLREL----------QFSK 47
           +++  + P  ++ +A+  + Q+  +L    +     S++GTS   +          QF++
Sbjct: 185 SDEGMIYPELVLDKALDREEQEELSLTLTALDGGSPSRSGTSTIRIVVLDVNDNAPQFAQ 244

Query: 48  NEYSVSALENLPVNYVLLTVTTNKPR---DLRVKYWL---SNDYGERFSISR-QGDISLM 100
             Y   A EN PV  +++ V+        +  V Y     S D    F I+   G+I L 
Sbjct: 245 ALYETQAPENSPVGSLIVKVSAGDADSGVNAEVSYSFFDASEDILTTFQINPFSGEIFLR 304

Query: 101 QCLDYETEDSYRFTVYATD-TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHI--PLA 157
           + LDYE  +SY+  + A D   ++   TV I V++ ND  P       EL +  +   +A
Sbjct: 305 ELLDYELVNSYKINIQAMDGGGLSARCTVLIKVLDSNDNPP-------ELIISSLSNSVA 357

Query: 158 DLTPGSVIGKVEAADGDKGD 177
           + +PG V+   +  D D G+
Sbjct: 358 ENSPGIVLAVFKIKDRDSGE 377


>gi|322792776|gb|EFZ16609.1| hypothetical protein SINV_01844 [Solenopsis invicta]
          Length = 1463

 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 47/151 (31%), Positives = 81/151 (53%), Gaps = 15/151 (9%)

Query: 95  GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFL 151
           G +   Q +DYE      FTV   D+    ++ +A V ++V+NVND DP+F   + EL+ 
Sbjct: 576 GIVRTSQVIDYEETKQLEFTVVGYDSGVPQLSATAKVTVTVINVNDQDPKF---EKELYN 632

Query: 152 PHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSI-NDSGHISIVDLSALN 208
             +   +  PG+ +  V+A DGD+G    V+ SL G +   F+I +++G I++   + L+
Sbjct: 633 ASVK-ENSPPGTRVTVVKATDGDEGPFGDVSYSLIGEHAADFNIGHETGEITVGGATVLD 691

Query: 209 ---TSTIQLVVVATDTG--NPPRQASVPAIM 234
              T  I + V+A+D    N  R  +VP ++
Sbjct: 692 REVTPEITITVMASDGAHINSRRSTTVPVVV 722



 Score = 58.2 bits (139), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 63/223 (28%), Positives = 99/223 (44%), Gaps = 44/223 (19%)

Query: 29  ATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRD------LRVKYWLS 82
           AT+ +S    +     F    Y+ +  E       ++T+T  K RD        + Y L 
Sbjct: 63  ATVTISITDANDNAPSFGSPTYTATVSETAAPGSPIITITA-KDRDSGRFGTAGIVYQLL 121

Query: 83  NDYGERFSISRQ-GDISLMQC--------LDYETEDSYRFTVYATD---TLMTTSATVNI 130
               E F+I ++ G I++  C        LDYE +  Y  T  ATD      TTS ++ I
Sbjct: 122 GQGAEHFAIDKKTGTITVAPCPTPGTSPCLDYEQQTEYFLTYKATDDNGEGQTTSVSLRI 181

Query: 131 SVVNVNDWDPRFRYPQY--------ELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS 182
           S+V+ ND  PRF   +Y        E F P +            KV+A D DK  ++T +
Sbjct: 182 SLVDANDSPPRFLQDKYRAVVDEGAEKFEPEL------------KVQARDKDKTSKITYA 229

Query: 183 LRGPYE-KMFSIN-DSGHISI---VDLSALNTSTIQLVVVATD 220
           L G  E  +F+++ D+G I++   VD++      I L + A+D
Sbjct: 230 LVGGNELGLFAVDPDTGEITVKSPVDMTNATHDWIALTIQASD 272



 Score = 45.1 bits (105), Expect = 0.057,   Method: Compositional matrix adjust.
 Identities = 42/138 (30%), Positives = 69/138 (50%), Gaps = 14/138 (10%)

Query: 95  GDISLMQCLDY--ETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLP 152
           G+I++   +D    T D    T+ A+D +   SA VNI+V +VN+  P F +  Y     
Sbjct: 246 GEITVKSPVDMTNATHDWIALTIQASDGIFVDSALVNITVRDVNNNAPMFPHDIYTA--- 302

Query: 153 HIPLADLTP-GSVIGKVEAADGDKGDRVTLSLR---GPYEKMFSINDSGHISIVD--LSA 206
              +A+++P G+V+ +V A D D G    L  R   G ++  F+IN++  +  V   L  
Sbjct: 303 --SIAEISPIGTVVEEVTATDADSGVNSELVYRIQKGAFDD-FAINETTGVVTVSRKLDY 359

Query: 207 LNTSTIQLVVVATDTGNP 224
              +T  + V+A D G P
Sbjct: 360 DEKNTYHVEVIAFDKGTP 377



 Score = 44.7 bits (104), Expect = 0.074,   Method: Compositional matrix adjust.
 Identities = 57/199 (28%), Positives = 87/199 (43%), Gaps = 19/199 (9%)

Query: 45  FSKNEYSVSALENLPVNY---VLLTVTTNKPRDLRVKYW---LSNDYGERFSISRQGDIS 98
           FS++ Y  S  ENL VN    +L     ++      + W   ++ +  E FS++R+  I 
Sbjct: 734 FSQHSYRASVAENLSVNPPAPILQVRAVDQDEGTNGEVWYTIINGNENESFSLNRETGIL 793

Query: 99  LMQCLDYETEDSYRFTVYATDTL----MTTSATVNISVVNVNDWDPRFRYPQYELFLPHI 154
                      SYR  V A D       +    V+I V  VN   P+F  P+       +
Sbjct: 794 YPAAALLGRAGSYRIEVEARDGAGSGPHSDRCYVDIRVTPVNQHKPQFVMPELTNATVEV 853

Query: 155 PLADLTPGSVIGKVEAADGDKGD--RVTLSL----RGPYE-KMFSIN-DSGHI-SIVDLS 205
           P     P  +I  V+A D D G+  RV+  L    R   E + FSI+ ++G + S + L 
Sbjct: 854 PENAGVPNYLILTVKAIDRDPGENGRVSYHLKVGNRNVQETEEFSIDQETGELRSKIILD 913

Query: 206 ALNTSTIQLVVVATDTGNP 224
               S  +LV+VA D G+P
Sbjct: 914 REIKSKFELVLVAADHGSP 932


>gi|301620403|ref|XP_002939565.1| PREDICTED: cadherin-23-like [Xenopus (Silurana) tropicalis]
          Length = 2570

 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 59/195 (30%), Positives = 90/195 (46%), Gaps = 20/195 (10%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDLR---VKYWLSNDYGERFSIS-RQGDISLM 100
            FS++ Y     E++ +   +L +        R   ++Y L +  G +F I+   GDI ++
Sbjct: 1878 FSQSSYQKPVFEDIQLGATVLQIKATDADSGRFALIQYSLVDGEG-KFGINPTTGDIYIL 1936

Query: 101  QCLDYETEDSYRFTVYATD-------TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
              LD E +D Y  T  A D            S  V I+V++VND  P+F   Q+   +  
Sbjct: 1937 STLDREKKDHYTLTAIARDNPGDIASNRRENSVQVLITVLDVNDCRPQFSKSQFSTSV-- 1994

Query: 154  IPLADLTPGSVIGKVEAADGDKGDR--VTLSLRGPYEKMFSIN-DSGHISIVDLSALNTS 210
                +   G+ +  + A D D+GD   VT +L GP  + F I+ DSG I+   L   +  
Sbjct: 1995 --YENEPEGTSVITMSATDLDEGDNGVVTYNLEGPGSEAFLIDKDSGLITSRRL-LQSFE 2051

Query: 211  TIQLVVVATDTGNPP 225
               L VVATD G PP
Sbjct: 2052 RFNLTVVATDKGRPP 2066



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 54/168 (32%), Positives = 89/168 (52%), Gaps = 17/168 (10%)

Query: 76  RVKYWLSNDYGERFSISRQ-GDISLMQCLDYETEDSYRFTVYATDTL-MTTSATVNISVV 133
           +V Y+ S+D  +RFS+ +  G I+++  LDYET   Y  TV A D     T+  V I+V+
Sbjct: 13  KVSYFFSDD-PDRFSLDKDTGVITVITRLDYETTQRYTLTVIARDGGGEETTGRVRINVL 71

Query: 134 NVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSL--RGPYEK 189
           +VND  P F   Q E +L  I   + +  +V+ K+ A D D    +++T S+     ++ 
Sbjct: 72  DVNDNMPIF---QKESYLGAIRENEPSVVTVV-KLRATDEDSAPNNQITYSILNASAFQS 127

Query: 190 MFSINDS---GHISI---VDLSALNTSTIQLVVVATDTGNPPRQASVP 231
            F I+ S   G I++   +D   ++   I L V+A D+G P   ++VP
Sbjct: 128 YFEISISEGYGVITVTRPLDYEQISNGVISLTVMAKDSGVPSLNSTVP 175



 Score = 46.2 bits (108), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 57/197 (28%), Positives = 94/197 (47%), Gaps = 26/197 (13%)

Query: 88  RFSIS-RQGDISLMQCLDYETEDSYRFTVYATDT-----LMTTSATVNISVVNVNDWDPR 141
           +F++  R G +  +  LD ET  SY   + A D        T +ATV+++V+++ND  P 
Sbjct: 510 KFTVGFRDGILRTVVNLDRETVASYTLVLEAIDNGPAGNRKTGTATVSVTVLDINDNKPI 569

Query: 142 FRYPQYELFLP-HIPLADLTPGSVIGKVEAADGDKGDRVTLSLR---GPYEKMFSIN-DS 196
           F    YE  +P ++P +     S I ++EA D D+GD   +  R   G  +  F I+ ++
Sbjct: 570 FLKSSYEASVPENVPFS-----SSIVQLEATDADEGDNGLVWYRILSGNEKTNFRIDVNT 624

Query: 197 GHI--SIVDLSALNTSTIQLVVVATDTGNPPRQASVPAIMHFPE------AIVQQASSKL 248
           G I   +  L     S+  LVV A ++   P ++SV  I++  +         QQ  S+L
Sbjct: 625 GLIMRGVQPLDRETNSSHVLVVEAYNSDQGPMRSSVRVIIYVEDVNDEVPVFTQQQYSRL 684

Query: 249 NSGTSSTVLIILGVVLI 265
             G   TV I   V ++
Sbjct: 685 --GLRETVGIGTSVTVV 699



 Score = 45.4 bits (106), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 54/204 (26%), Positives = 95/204 (46%), Gaps = 16/204 (7%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWL-SNDYGERFSI-SRQGDISL 99
           FS++ Y ++ +EN+     +L +     ++ R+   +  + S D   +F I +R G+I+ 
Sbjct: 190 FSRSSYVITVMENIIAGATVLFLNATDLDRSREYGQESIIYSLDGSPQFRINARSGEITT 249

Query: 100 MQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADL 159
              LD E +  Y   + A D  +  +  + I+ VN+   D     PQ++     I LA++
Sbjct: 250 TTLLDREAKSEYILIIRAVDGGVGPNQKIGIATVNITLLDINDNAPQWKDEPYLINLAEM 309

Query: 160 T-PGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSIND-SGHISI--VDLSALNTSTIQ- 213
           T P S +  V A D D  +  TL     P  K +++N  +G I    V L   N + ++ 
Sbjct: 310 TPPDSDVTTVVAIDPDLAENGTLVYSISPLNKFYTLNSTTGKIRTTGVVLDRENPNPVEA 369

Query: 214 -----LVVVATDTGNPPRQASVPA 232
                +V+  TD G PP +A+  A
Sbjct: 370 EMMRKIVISVTDRGRPPLRATSSA 393



 Score = 43.1 bits (100), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 57/216 (26%), Positives = 95/216 (43%), Gaps = 33/216 (15%)

Query: 51   SVSALENLPVNYVLLTVTTNKPRDL--RVKYWL-------------SNDYGERFSIS-RQ 94
            +VS LE+  V  V+  VT    RDL  R++Y++              N  G  F I+ + 
Sbjct: 1656 TVSVLESAEVGTVVAEVTA-IDRDLNPRLEYYIIEILATDDTNSLIPNQQG-VFEINFKT 1713

Query: 95   GDISLMQCLDYETEDSYRFTVYATD--------TLMTTSATVNISVVNVNDWDPRFRYPQ 146
            G + +   L+ E   +Y  T+   D        ++   +A + +++++VND  PRFR   
Sbjct: 1714 GSVMVKSNLNRELVATYDITISVYDNASEVVDRSVSAPNAKLTVNILDVNDNTPRFRPFG 1773

Query: 147  YELFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMF-SINDSGHISIVD 203
               F   I +   TPG+ +  V A D DKG   ++T SL       +  + D+    I+ 
Sbjct: 1774 VTAFTERI-VEGATPGTTLISVSAVDPDKGPNGQITYSLHNLVPAGYLQLEDNMAGKIIA 1832

Query: 204  LSALNTSTIQ---LVVVATDTGNPPRQASVPAIMHF 236
               ++   +Q     V A+D G+P R A VP  +  
Sbjct: 1833 NRTVDYEQVQWLNFTVRASDNGSPRRSAEVPVYLQI 1868



 Score = 40.0 bits (92), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 52/189 (27%), Positives = 87/189 (46%), Gaps = 19/189 (10%)

Query: 2    INEDDFLQPI---TLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENL 58
            I+ + FL PI   TLV   I   N    + A L+++    +     FS +  +V   EN 
Sbjct: 1503 IDRESFLNPILDLTLVAEDIGKLN----STARLVLTVLDANDNRPIFSPSSVTVHLRENS 1558

Query: 59   PVNYVLLTVTTNKPR---DLRVKYWLSNDYGERFSI-SRQGDISLMQC-LDYETEDSYRF 113
            P  + ++ VT        + ++ Y + +   +RF I +  G I +    +D E +D+Y+ 
Sbjct: 1559 PPGFSVVKVTATDADSGINQQLSYRIESGAQDRFLIDAFTGVIRVANVTVDREEKDTYKL 1618

Query: 114  TVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEA 170
             V ATD     ++ S TV+I + +VND  P F  P   + +    L     G+V+ +V A
Sbjct: 1619 IVVATDQGAVPLSGSITVSILIDDVNDCPPEFVNPIQTVSV----LESAEVGTVVAEVTA 1674

Query: 171  ADGDKGDRV 179
             D D   R+
Sbjct: 1675 IDRDLNPRL 1683



 Score = 37.7 bits (86), Expect = 9.5,   Method: Compositional matrix adjust.
 Identities = 59/201 (29%), Positives = 92/201 (45%), Gaps = 24/201 (11%)

Query: 45   FSKNEYSVSALEN-LPVNYVLLTVTT---NKPRDLRVKYWLS-NDYGERFSISRQ-GDIS 98
            F    Y V+  E  L +N V+LT T    ++  +  V Y +S  +  E FSI+   G I 
Sbjct: 1110 FKSPVYEVTRDEGPLSLNSVILTTTAVDQDEGPNGTVTYSISAGNVQETFSINNATGLIR 1169

Query: 99   LMQCLDYE-TEDSYRFTVYATDTL------MTTSATVNISVVNVNDWDPRFRYPQYELFL 151
            +++ LDYE     Y   V ATD        +T++ATV ++V ++ND  P F  P    F 
Sbjct: 1170 VVKELDYEVCLGRYTLIVTATDRCPIVQRRLTSTATVLVNVNDINDNWPTFPKPYEGPF- 1228

Query: 152  PHIPLADLTPGSVIGKVEAADGDKG--DRVTLSL-RGPYEKMFSIND-SGHISI---VDL 204
                + +  PG  +   +A D D G   +V  S+  G     F I+   G + +    +L
Sbjct: 1229 ---EITEGQPGPRVATFKADDKDSGLNGQVEYSIVGGDLLGDFVISSVEGDLRVRKDYEL 1285

Query: 205  SALNTSTIQLVVVATDTGNPP 225
               N +   + ++A D GNPP
Sbjct: 1286 DRENIAFYNITIMAKDRGNPP 1306


>gi|262263220|tpg|DAA06597.1| TPA_inf: protocadherin gamma b1 isoform [Anolis carolinensis]
          Length = 940

 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 72/301 (23%), Positives = 129/301 (42%), Gaps = 43/301 (14%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKP---RDLRVKYWLSNDYGERFSIS-------RQ 94
           F K  ++   LEN P    +  V  + P   R+ ++ Y   +   E   +S         
Sbjct: 454 FEKPSFTTYILENNPAGVSVFHVKASDPDLDRNAQITYSFLSTSIEDLPLSSYISINSET 513

Query: 95  GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRY----PQY 147
           G I   +  DYE    ++  V A D     +++SATV + +++ ND  P+  Y    P+ 
Sbjct: 514 GTIYSQRSFDYEQLREFQIEVRAQDGGSPPLSSSATVTVCILDRNDNSPQILYPSQVPEG 573

Query: 148 ELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSI-NDSGHISIVD 203
                 +P +    G ++ KV A D D G    LS   L+     +F+I + +G I    
Sbjct: 574 SSVFEMVPRS-AESGYLVTKVVAVDADSGHNSWLSFHLLQATEPSLFTIGSHTGEIQTAR 632

Query: 204 -LSALNTSTIQLVVVATDTGNPPRQASVPAIMHFPEAIVQQASSKLNSGTSST------- 255
            L   +    +LVV+  D G+PP  A+V   + F E+  Q+A  ++NS  + +       
Sbjct: 633 TLLERDAVKQKLVVMVKDNGHPPLSATVTVNLVFAESF-QEALPEINSQPNDSESPSDIQ 691

Query: 256 VLIILGVVLIVLGFVIILLILYIHKNKHTKNNGPPGSSHSKNDSFLSNVILPEKHVNVVA 315
             ++L + L+   F++ +++  + K +            S+N +FL    +P+ H    A
Sbjct: 692 FYLVLALALVSFLFLVTVILTIMMKLR-----------RSRNPTFL-QCFIPDPHSKTGA 739

Query: 316 I 316
           I
Sbjct: 740 I 740



 Score = 42.0 bits (97), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 53/232 (22%), Positives = 102/232 (43%), Gaps = 21/232 (9%)

Query: 9   QPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVT 68
           Q   +++ A+      +   AT++V+    +     FS+  Y  S  EN P+   +L V 
Sbjct: 208 QTYHMILTAMDGGESKKTGTATILVTVTDINDNTPVFSQASYKGSLKENSPIGMSILQVK 267

Query: 69  ---TNKPRDLRVKY---WLSNDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYATD-T 120
              +++  +  + Y    + +   + F++ SR G I LM+ +D+E   +Y   + A+D  
Sbjct: 268 ASDSDEGSNADITYTIIKIQDSIQKIFNVDSRDGTIILMENIDFEDRQNYVMIMQASDGG 327

Query: 121 LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGD--R 178
            +     V I V++ ND  P          +P     D+ PG+VI  ++  D D G+   
Sbjct: 328 GLVAHCNVEIEVLDENDNPPDVILTSISSPVPE----DIEPGAVIALIKVHDKDSGENGE 383

Query: 179 VTLSLRG--PYEKMFSINDSGHISIVDLSALNTSTI---QLVVVATDTGNPP 225
           V   L+   P++ + S +D  +  ++  S+L+        + + A D G  P
Sbjct: 384 VNCHLQEFVPFQIVSSSDD--YFKLLTDSSLDRERFPGYNITITAMDKGTSP 433


>gi|119582382|gb|EAW61978.1| protocadherin beta 6 [Homo sapiens]
          Length = 794

 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 48/151 (31%), Positives = 71/151 (47%), Gaps = 12/151 (7%)

Query: 95  GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFL 151
           G +  ++ LDYE   S+ F V ATD     +++ A V + V++ ND  P   YP      
Sbjct: 509 GHLFALRSLDYEALQSFEFRVGATDRGSPALSSEALVRLLVLDANDNSPFVLYPLQNGSA 568

Query: 152 PHIPLADLT--PGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSI-NDSGHISIVD-L 204
           P   L      PG ++ KV A DGD G    LS   L+     +F +   +G +     L
Sbjct: 569 PCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKATEPGLFGVWAHNGEVRTARLL 628

Query: 205 SALNTSTIQLVVVATDTGNPPRQASVPAIMH 235
           S  + +  +LVV+  D G PPR A+  A +H
Sbjct: 629 SERDAAKQRLVVLVKDNGEPPRSAT--ATLH 657



 Score = 47.0 bits (110), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 45/138 (32%), Positives = 64/138 (46%), Gaps = 21/138 (15%)

Query: 102 CLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLAD 158
            LD E+   Y  T+  TD     + T  ++ + V +VND  P F    Y LF+      +
Sbjct: 406 ALDRESRAEYNITITVTDLGTPRLKTQQSITVQVSDVNDNAPAFTQTSYTLFVRE----N 461

Query: 159 LTPGSVIGKVEAADGDKG--DRVTLSLRGPYE------KMFSIN-DSGH---ISIVDLSA 206
            +P   IG V A D D G   +VT SL  P +       + SIN D+GH   +  +D  A
Sbjct: 462 NSPALHIGSVSATDRDSGINAQVTYSLLPPQDPHLPLSSLVSINADNGHLFALRSLDYEA 521

Query: 207 LNTSTIQLVVVATDTGNP 224
           L   + +  V ATD G+P
Sbjct: 522 LQ--SFEFRVGATDRGSP 537



 Score = 40.0 bits (92), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 40/143 (27%), Positives = 66/143 (46%), Gaps = 18/143 (12%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTTNKPRDL------RVKYWL--SNDYGERFSISR-Q 94
           +F++  Y     EN P+  +++TV+    RDL      +V Y L   +D  + F I+   
Sbjct: 240 EFAQELYEAQVPENNPLGSLVITVSA---RDLDAGSFGKVSYALFQVDDVNQPFEINAIT 296

Query: 95  GDISLMQCLDYETEDSYRFTVYATD-TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
           G+I L + LD+E   SY   V ATD   ++   ++ + V++VND  P         F+  
Sbjct: 297 GEIRLRKALDFEEIQSYDVDVEATDGGGLSGKCSLVVRVLDVNDNAPEL---TMSFFISL 353

Query: 154 IPLADLTPGSVIGKVEAADGDKG 176
           IP  +  P   +     +D D G
Sbjct: 354 IP--ENLPEITVAVFSVSDADSG 374


>gi|18700014|ref|NP_570948.1| cadherin-related family member 1 precursor [Mus musculus]
 gi|81879437|sp|Q8VHP6.1|CDHR1_MOUSE RecName: Full=Cadherin-related family member 1; AltName:
           Full=Photoreceptor cadherin; Short=prCAD; AltName:
           Full=Protocadherin-21; Flags: Precursor
 gi|18182377|gb|AAL65140.1|AF426393_1 photoreceptor cadherin [Mus musculus]
 gi|34849787|gb|AAH58270.1| Protocadherin 21 [Mus musculus]
 gi|37537227|gb|AAH42454.2| Protocadherin 21 [Mus musculus]
          Length = 859

 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 61/211 (28%), Positives = 94/211 (44%), Gaps = 28/211 (13%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTTNKPRDL----RVKYWLSNDYGERFSISRQGDISL 99
           +F +  Y +   EN+P    +  V     +D      V Y L N +  +FS+ R   +  
Sbjct: 134 RFIQEPYIIRVPENIPAGSSIFKVQAED-KDTGSGGSVTYSLQNLHSSKFSMDRHSGVLR 192

Query: 100 MQC---LDYETEDSYRFTVYA---------TDTLMTTSATVNISVVNVNDWDPRFRYPQY 147
           +Q    LDYE   ++  TV A          D + + + TV I+V +V D  P F    Y
Sbjct: 193 LQAGATLDYEKSRAHYITVIAKDGGGRLRGADMVFSATTTVTINVEDVQDTAPIFVGTPY 252

Query: 148 ELFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIND-SGHISIVDL 204
             ++      D  PGS +  V A DGD+G  + +   L    + +F IN+ SG IS++  
Sbjct: 253 YGYV----YEDTLPGSEVLTVVAIDGDRGKPNHILYRLLNESDGIFEINETSGAISVLQS 308

Query: 205 SA-LNTSTIQLVVVATDT---GNPPRQASVP 231
            A L     +L V  T+    G+P  QA+VP
Sbjct: 309 PALLRREVYELHVQVTEVNSPGSPAAQATVP 339



 Score = 43.5 bits (101), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 56/186 (30%), Positives = 85/186 (45%), Gaps = 17/186 (9%)

Query: 56  ENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGER--FSISRQ-GDISLMQCLDYETEDSYR 112
           E+ PV   + T+    P    + Y +S D   R  FS+    G+I+L++ LD E ED   
Sbjct: 46  EDTPVGSHVYTLNGTDPEGDPISYHISFDPSTRSVFSVDPNFGNITLVEELDREREDEIE 105

Query: 113 FTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAAD 172
             +  +D L   +  V I V + ND  PRF    Y + +P     ++  GS I KV+A D
Sbjct: 106 AIISISDGLNLVAEKVVILVTDANDEAPRFIQEPYIIRVPE----NIPAGSSIFKVQAED 161

Query: 173 GD--KGDRVTLSLRGPYEKMFSINDSGHISIVDLSALNTSTIQ------LVVVATDTGNP 224
            D   G  VT SL+  +   FS++   H  ++ L A  T   +      + V+A D G  
Sbjct: 162 KDTGSGGSVTYSLQNLHSSKFSMDR--HSGVLRLQAGATLDYEKSRAHYITVIAKDGGGR 219

Query: 225 PRQASV 230
            R A +
Sbjct: 220 LRGADM 225


>gi|449677345|ref|XP_002162352.2| PREDICTED: protocadherin Fat 1-like [Hydra magnipapillata]
          Length = 2676

 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 42/137 (30%), Positives = 67/137 (48%), Gaps = 11/137 (8%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGERFSISRQGDISLMQCL 103
            +F K+ Y  S  EN    Y +  V+      + ++Y +  +    F I+ QG I+L   L
Sbjct: 1752 EFQKDLYQFSVKENSHAGYTIGVVSARSLSGITIQYSIEGNVDNLFVINAQGAITLQGAL 1811

Query: 104  DYETED-SYRFTVYATDTL---MTTSATVNISVVNVNDWDPRFRYPQY--ELFLPHIPLA 157
            D+E+ D SY  TV A++     + +   V I V+NVND  P F   +Y  +  + ++P+ 
Sbjct: 1812 DFESGDSSYSLTVQASEISSKPLKSITNVIIQVINVNDNSPEFSMAEYRSKSIMENVPV- 1870

Query: 158  DLTPGSVIGKVEAADGD 174
                G  + KVEA D D
Sbjct: 1871 ----GHTVMKVEATDCD 1883



 Score = 54.3 bits (129), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 72/285 (25%), Positives = 122/285 (42%), Gaps = 47/285 (16%)

Query: 12   TLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEY-SVSALENLPVNYVLLTV--- 67
            +L V+A +  ++   ++  +I+     +    +FS  EY S S +EN+PV + ++ V   
Sbjct: 1821 SLTVQASEISSKPLKSITNVIIQVINVNDNSPEFSMAEYRSKSIMENVPVGHTVMKVEAT 1880

Query: 68   ------TTNKPRDLRVKYWLSNDYGERFSISR-QGDISLMQCLDYETEDSYRFTVYATDT 120
                  T      L V  +  + + + F I    G+I +++ LDYE    YRF V   DT
Sbjct: 1881 DCDCSQTCECAGGLLV--YSMDKFSDTFRIDHVTGEIKIIRSLDYEAISEYRFQVKVKDT 1938

Query: 121  LMTTS---ATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGD 177
             + T+   A V I+V NVND  P+F      + +      ++  G+++  V+A D D GD
Sbjct: 1939 GVNTNTGLADVVINVANVNDNSPKFTPDNGVVSIAE----NIQRGTIVITVQAQDLD-GD 1993

Query: 178  RVTLSLRGPYEKMFSI-NDSGHISIVDLS-----------------ALNTSTIQLVVVAT 219
             V   L       F I  D+G + I  ++                  +N     L V+  
Sbjct: 1994 VVKYDLSSQDNNNFEIGKDTGVVRITTVNNPSFLRDDYILNITATDGINIGYFALKVIIE 2053

Query: 220  DTG-NPP-------RQASVPAIMHFPEAIVQQASSKLNSGTSSTV 256
            D   N P        +A+VP  M     ++Q ++S L+ G +  V
Sbjct: 2054 DVNDNSPIFRKCSQYKATVPEQMPINTKVIQVSASDLDRGRNGEV 2098



 Score = 48.1 bits (113), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 32/103 (31%), Positives = 53/103 (51%), Gaps = 3/103 (2%)

Query: 43  LQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGERFSISRQ-GDISLMQ 101
           + FS+N+ SV+  E+LPV   +  V T+   + +++Y LS D    F IS++ G I+L +
Sbjct: 224 IHFSQNQLSVTIREDLPVKSFVYIVLTDADYNSKLEYSLSGDSDNLFYISKKSGVITLAK 283

Query: 102 CLDYETEDSYRFTVYATD--TLMTTSATVNISVVNVNDWDPRF 142
            L    +  Y   +   D   + + S TV I   N N + P+F
Sbjct: 284 SLKTAKQQEYMLVITVKDGFGIYSVSLTVKIQQYNFNMYSPQF 326



 Score = 47.8 bits (112), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 39/107 (36%), Positives = 53/107 (49%), Gaps = 7/107 (6%)

Query: 92   SRQGDISLMQCLDYETEDSYRFTVYATDTL-MTTSATVNISVVNVNDWDPRFRYPQYELF 150
            S  G+I + + LDYE  +SY  TV A D   M T+A V I +++VND  P F    YE  
Sbjct: 2339 SASGEIKIAKILDYEALNSYVLTVSAADKRGMKTNAKVFIQIIDVNDNTPLFVLSTYEF- 2397

Query: 151  LPHIPLADLTPGSVIGKVEA--ADGDKGDRVTLSLRGPYEK-MFSIN 194
                     + G ++ +V A  AD D   +V  SL    E  MFSI+
Sbjct: 2398 --GKVAEGKSAGVIVEQVNATDADSDINGKVLYSLEPSAEADMFSID 2442



 Score = 47.8 bits (112), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 44/177 (24%), Positives = 85/177 (48%), Gaps = 8/177 (4%)

Query: 92   SRQGDISLMQCLDYETEDSYRFTVYATD-TLMTTSATVNISVVNVNDWDPRFRYPQYELF 150
            +R G++     LD E +  Y   + A D +     A+V I+V+NVND  P FR     + 
Sbjct: 1404 TRNGNLRSTSSLDAEKQVQYIIYIRAADLSERFAEASVEINVINVNDNSPFFRAAINNV- 1462

Query: 151  LPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSINDSGHI---SIVDLSA 206
            +  I L  L  G  I  V+  D D GD ++  +  GP   +F I+++G I   + + + +
Sbjct: 1463 IEVIVLRSLAVGIPIVDVQGVDNDVGDSLSYKINSGPARGIFHIDNNGVIRSLTSLKMLS 1522

Query: 207  LNTSTIQLVVVATDTGNPPRQASVPAIM--HFPEAIVQQASSKLNSGTSSTVLIILG 261
            L+T+  +  + A D+      A +  ++  + P  I+ ++  +++  +   ++  LG
Sbjct: 1523 LDTNVNEFEISAKDSQGLESSAQIRVVLVNYRPGGIIVRSVGEMHLPSHGEIIKDLG 1579



 Score = 44.7 bits (104), Expect = 0.086,   Method: Compositional matrix adjust.
 Identities = 52/211 (24%), Positives = 94/211 (44%), Gaps = 29/211 (13%)

Query: 49   EYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLS-------NDYGERFSISRQ-GDI 97
            +Y  +  E +P+N  ++ V+    ++ R+  V+Y +        N +   F I    G I
Sbjct: 2067 QYKATVPEQMPINTKVIQVSASDLDRGRNGEVEYDIQETQKDNPNKFSADFKIDNTTGVI 2126

Query: 98   SLMQCLDYETEDSYRFTVYATD--------TLMTTSATVNISVVNVNDWDPRFRYPQYEL 149
            +  +  D E + SY   V A D           + S  + I + ++ND  P F   +Y+ 
Sbjct: 2127 TTNKVFDREIKSSYIVLVIALDGGHGRDPAERNSGSCQLEIQIEDINDHSPIFSVQKYD- 2185

Query: 150  FLPHIPLADLTP-GSVIGKVEAADGDKGDR--VTLSLR-GPYEKMFSINDSGHISIVDLS 205
                I +A+ TP  SV+ +V A D D+G    +T S++       F I+ S  + +V  S
Sbjct: 2186 ----ISIAENTPIDSVVLEVSAQDQDEGKNALITYSIKPNVITSNFKIDSSSGVILVAES 2241

Query: 206  ALNTST-IQLVVVATDTGNPPRQASVPAIMH 235
             +         V+ATD+G P   ++V  +++
Sbjct: 2242 LIGKQERYSFQVLATDSGTPSASSNVEVVIY 2272



 Score = 42.4 bits (98), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 51/222 (22%), Positives = 102/222 (45%), Gaps = 15/222 (6%)

Query: 25   RYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYW--LS 82
            R +    I+++    +R   F+++ Y  S ++N+PV   ++T++TN+        +  +S
Sbjct: 1023 RRSTKISIIAQVKDGIRPPIFTQSFYRGSLVDNVPVGESIVTISTNEVDSSSTTSFRIIS 1082

Query: 83   NDYGERFSISRQGDISLMQCLDYETEDSYRF--TVYATDTLMTTSATVNISVVNVNDWDP 140
            ++    F I     +   + +DY+   + +F  T+   +   T+  TV ++  + ND  P
Sbjct: 1083 SNLSNNFCIDFSKTLFTQKAMDYDLARNNKFPVTIEMINGYQTSKTTVLLTWSDENDNIP 1142

Query: 141  RFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGD--RVTLSL-----RGPYEKMFSI 193
             F      +        ++  G VI + EA D D GD  R+T S+      G  E +F I
Sbjct: 1143 FFTNGVGPIVREVSETQNV--GYVIFRAEAKDQDAGDNGRITYSISQVISSGRSENLFKI 1200

Query: 194  ND-SGHISIVDLSAL-NTSTIQLVVVATDTGNPPRQASVPAI 233
            +  +G +SI  L     TS   +++ A D G+  ++ ++  +
Sbjct: 1201 DPVTGDLSIAKLLNFEETSEHTIIIKAEDNGDTIKRFTLQEV 1242


>gi|62510881|sp|Q5DRC9.1|PCDB5_PANTR RecName: Full=Protocadherin beta-5; Short=PCDH-beta-5; Flags:
           Precursor
          Length = 795

 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 48/151 (31%), Positives = 72/151 (47%), Gaps = 12/151 (7%)

Query: 95  GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFL 151
           G +  ++ LDYE   ++ F V ATD     +++ A V + V++ ND  P   YP      
Sbjct: 510 GHLFALRSLDYEALQAFEFRVGATDRGSPALSSEALVRVLVLDANDNSPFVLYPLQNGSA 569

Query: 152 PHIPLADLT--PGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSI-NDSGHISIVD-L 204
           P   L      PG ++ KV A DGD G    LS   L+     +FS+   +G +     L
Sbjct: 570 PCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKATEPGLFSMWAHNGEVRTARLL 629

Query: 205 SALNTSTIQLVVVATDTGNPPRQASVPAIMH 235
           S  + +  +LVV+  D G PPR A+  A +H
Sbjct: 630 SERDAAKHRLVVLVKDNGEPPRSAT--ATLH 658



 Score = 45.4 bits (106), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 40/144 (27%), Positives = 66/144 (45%), Gaps = 18/144 (12%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYG--------ERFSI-SRQ 94
           +F ++ Y V   EN P+N +++ V+    RDL    + S  Y         + F I  + 
Sbjct: 241 EFLQSLYEVQVPENSPLNSLVVVVSA---RDLDAGAYGSVAYALFQGDEVTQPFVIDEKT 297

Query: 95  GDISLMQCLDYETEDSYRFTVYATD-TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
           G+I L + LD+E    Y   + ATD   ++   TV + VV+VND       P+  +    
Sbjct: 298 GEIRLKRALDFEATPYYNVEIVATDGGGLSGKCTVAMEVVDVND-----NAPELTMSTLS 352

Query: 154 IPLADLTPGSVIGKVEAADGDKGD 177
            P+ +  P +V+     +D D GD
Sbjct: 353 SPIPENAPETVVAVFSVSDPDSGD 376



 Score = 45.1 bits (105), Expect = 0.060,   Method: Compositional matrix adjust.
 Identities = 45/139 (32%), Positives = 63/139 (45%), Gaps = 21/139 (15%)

Query: 101 QCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLA 157
           + LD E++  Y  T+  TD     + T   + + V +VND  P F    Y LF+      
Sbjct: 406 RTLDRESQAEYNITITVTDMGTPRLKTEHNITVLVSDVNDNAPAFTQTSYTLFVRE---- 461

Query: 158 DLTPGSVIGKVEAADGDKGD--RVTLSLRGP------YEKMFSIN-DSGH---ISIVDLS 205
           + +P   IG V A D D G   +VT SL  P         + SIN D+GH   +  +D  
Sbjct: 462 NNSPALQIGSVSATDRDSGTNAQVTYSLLPPQNPHLRLASLVSINADNGHLFALRSLDYE 521

Query: 206 ALNTSTIQLVVVATDTGNP 224
           AL     +  V ATD G+P
Sbjct: 522 ALQ--AFEFRVGATDRGSP 538


>gi|269914102|ref|NP_001013032.2| protocadherin beta-5 precursor [Pan troglodytes]
          Length = 795

 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 48/151 (31%), Positives = 72/151 (47%), Gaps = 12/151 (7%)

Query: 95  GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFL 151
           G +  ++ LDYE   ++ F V ATD     +++ A V + V++ ND  P   YP      
Sbjct: 510 GHLFALRSLDYEALQAFEFRVGATDRGSPALSSEALVRVLVLDANDNSPFVLYPLQNGSA 569

Query: 152 PHIPLADLT--PGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSI-NDSGHISIVD-L 204
           P   L      PG ++ KV A DGD G    LS   L+     +FS+   +G +     L
Sbjct: 570 PCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKATEPGLFSMWAHNGEVRTARLL 629

Query: 205 SALNTSTIQLVVVATDTGNPPRQASVPAIMH 235
           S  + +  +LVV+  D G PPR A+  A +H
Sbjct: 630 SERDAAKHRLVVLVKDNGEPPRSAT--ATLH 658



 Score = 46.2 bits (108), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 40/144 (27%), Positives = 66/144 (45%), Gaps = 18/144 (12%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYG--------ERFSI-SRQ 94
           +F ++ Y V   EN P+N +++ V+    RDL    + S  Y         + F I  + 
Sbjct: 241 EFLQSLYEVQVPENSPINSLVVVVSA---RDLDAGAYGSVAYALFQGDEVTQPFVIDEKT 297

Query: 95  GDISLMQCLDYETEDSYRFTVYATD-TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
           G+I L + LD+E    Y   + ATD   ++   TV + VV+VND       P+  +    
Sbjct: 298 GEIRLKRALDFEATPYYNVEIVATDGGGLSGKCTVAMEVVDVND-----NAPELTMSTLS 352

Query: 154 IPLADLTPGSVIGKVEAADGDKGD 177
            P+ +  P +V+     +D D GD
Sbjct: 353 SPIPENAPETVVAVFSVSDPDSGD 376



 Score = 45.1 bits (105), Expect = 0.059,   Method: Compositional matrix adjust.
 Identities = 45/139 (32%), Positives = 63/139 (45%), Gaps = 21/139 (15%)

Query: 101 QCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLA 157
           + LD E++  Y  T+  TD     + T   + + V +VND  P F    Y LF+      
Sbjct: 406 RTLDRESQAEYNITITVTDMGTPRLKTEHNITVLVSDVNDNAPAFTQTSYTLFVRE---- 461

Query: 158 DLTPGSVIGKVEAADGDKGD--RVTLSLRGP------YEKMFSIN-DSGH---ISIVDLS 205
           + +P   IG V A D D G   +VT SL  P         + SIN D+GH   +  +D  
Sbjct: 462 NNSPALQIGSVSATDRDSGTNAQVTYSLLPPQNPHLRLASLVSINADNGHLFALRSLDYE 521

Query: 206 ALNTSTIQLVVVATDTGNP 224
           AL     +  V ATD G+P
Sbjct: 522 ALQ--AFEFRVGATDRGSP 538


>gi|395820711|ref|XP_003783704.1| PREDICTED: protocadherin-15 isoform 7 [Otolemur garnettii]
          Length = 1909

 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 51/189 (26%), Positives = 90/189 (47%), Gaps = 23/189 (12%)

Query: 6   DFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVL- 64
           DF Q   LV++A Q +     A A+L +     + +   F+K+ Y    LE+ PV   + 
Sbjct: 334 DFHQKFDLVIKAEQDNGHPLPAFASLHIEILDENNQSPYFTKSSYQGYILESAPVGATIS 393

Query: 65  --LTVTT-----------NKPRDLRVKYWLSNDYGERFSISRQG---DISLMQCLDYETE 108
             L +TT              +D  +  +L NDY   F++++ G    ++L+Q +D E +
Sbjct: 394 DSLNLTTPLRIVALDKDIEDTKDPELHLFL-NDYTSVFTVTQTGITRYLTLLQPVDREEQ 452

Query: 109 DSYRFTVYATDTLMTTSAT-VNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGK 167
            +Y F++ A D +  +    VNI V++ ND  P F    Y +++      D+ PG  + +
Sbjct: 453 QTYTFSITAFDGVQESEPVIVNIRVMDANDNTPTFPEISYNVYV----YTDMNPGDSVIQ 508

Query: 168 VEAADGDKG 176
           + A D D+G
Sbjct: 509 LTAVDADEG 517



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 70/233 (30%), Positives = 101/233 (43%), Gaps = 26/233 (11%)

Query: 13  LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKP 72
           LVV A       R++  TL +           F+ + Y+V   ENLP     L +   K 
Sbjct: 765 LVVVATDGAVHPRHSTLTLAIKVLDIDDNSPVFTNSTYTVVVEENLPAGTTFLRIEA-KD 823

Query: 73  RDL--RVKYWLSNDYGERFSISR--QGDISLMQCLDYET----EDSYRFTVYATD---TL 121
            DL   V Y + +   + F       G++SL++ LDYE     E +  F V A D   T+
Sbjct: 824 VDLGANVSYRIRSPEVKHFFALHPFTGELSLLRSLDYEAFPDQEATITFLVEAFDIYGTM 883

Query: 122 MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDK----GD 177
               ATV + V ++ND+ P F    Y+  +      D   G+ I  V A D D       
Sbjct: 884 PPGIATVTVIVKDMNDYPPVFSKRLYKGMV----APDAVKGTPITTVYAEDADPPGLPAS 939

Query: 178 RVTLSLRG---PY-EKMFSIN-DSGH-ISIVDLSALNTSTIQLVVVATDTGNP 224
           RV   +     PY   +F +  DSG  I+ V+L+   T+  +LVVVA D G P
Sbjct: 940 RVRYRVDDVLYPYPASIFDVEEDSGRVITRVNLNEEPTTIFKLVVVAFDDGEP 992



 Score = 45.1 bits (105), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 53/193 (27%), Positives = 95/193 (49%), Gaps = 10/193 (5%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSN-DYGERFSISRQ-GDISLMQ 101
           +F +  YS+   E + +  VLL +         ++Y + N D    F++S   G ++L +
Sbjct: 593 RFPQLMYSLEISEAMRIGAVLLNLQATDREGDPIRYAIENGDPQGVFNLSETTGILTLGK 652

Query: 102 CLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLP-HIPLADLT 160
            LD E+ D Y   + A+D     ++T  ++VV  +  D     P ++ +LP ++ + +  
Sbjct: 653 ALDRESTDRYILIITASDGRPDGTSTATVNVVVTDVND---NAPVFDPYLPRNLSVVEEE 709

Query: 161 PGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDSGHI-SIVDLSALNTSTIQLVVV 217
             + +G+V A D D G   +V  SL G +  +F I  +G I + V L+       +LVVV
Sbjct: 710 ANAFVGQVRATDPDAGINGQVYYSL-GNFNNLFRITSNGSIYTAVKLNREVRDYYELVVV 768

Query: 218 ATDTGNPPRQASV 230
           ATD    PR +++
Sbjct: 769 ATDGAVHPRHSTL 781



 Score = 44.3 bits (103), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 49/171 (28%), Positives = 80/171 (46%), Gaps = 17/171 (9%)

Query: 76  RVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDTLM---TTSATVNISV 132
           +V Y L N +   F I+  G I     L+ E  D Y   V ATD  +    ++ T+ I V
Sbjct: 729 QVYYSLGN-FNNLFRITSNGSIYTAVKLNREVRDYYELVVVATDGAVHPRHSTLTLAIKV 787

Query: 133 VNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEK-MF 191
           ++++D  P F    Y + +      +L  G+   ++EA D D G  V+  +R P  K  F
Sbjct: 788 LDIDDNSPVFTNSTYTVVVEE----NLPAGTTFLRIEAKDVDLGANVSYRIRSPEVKHFF 843

Query: 192 SIND-SGHISI---VDLSAL--NTSTIQLVVVATDTGN--PPRQASVPAIM 234
           +++  +G +S+   +D  A     +TI  +V A D     PP  A+V  I+
Sbjct: 844 ALHPFTGELSLLRSLDYEAFPDQEATITFLVEAFDIYGTMPPGIATVTVIV 894


>gi|395820709|ref|XP_003783703.1| PREDICTED: protocadherin-15 isoform 6 [Otolemur garnettii]
          Length = 1906

 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 51/189 (26%), Positives = 90/189 (47%), Gaps = 23/189 (12%)

Query: 6   DFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVL- 64
           DF Q   LV++A Q +     A A+L +     + +   F+K+ Y    LE+ PV   + 
Sbjct: 334 DFHQKFDLVIKAEQDNGHPLPAFASLHIEILDENNQSPYFTKSSYQGYILESAPVGATIS 393

Query: 65  --LTVTT-----------NKPRDLRVKYWLSNDYGERFSISRQG---DISLMQCLDYETE 108
             L +TT              +D  +  +L NDY   F++++ G    ++L+Q +D E +
Sbjct: 394 DSLNLTTPLRIVALDKDIEDTKDPELHLFL-NDYTSVFTVTQTGITRYLTLLQPVDREEQ 452

Query: 109 DSYRFTVYATDTLMTTSAT-VNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGK 167
            +Y F++ A D +  +    VNI V++ ND  P F    Y +++      D+ PG  + +
Sbjct: 453 QTYTFSITAFDGVQESEPVIVNIRVMDANDNTPTFPEISYNVYV----YTDMNPGDSVIQ 508

Query: 168 VEAADGDKG 176
           + A D D+G
Sbjct: 509 LTAVDADEG 517



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 70/233 (30%), Positives = 101/233 (43%), Gaps = 26/233 (11%)

Query: 13  LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKP 72
           LVV A       R++  TL +           F+ + Y+V   ENLP     L +   K 
Sbjct: 765 LVVVATDGAVHPRHSTLTLAIKVLDIDDNSPVFTNSTYTVVVEENLPAGTTFLRIEA-KD 823

Query: 73  RDL--RVKYWLSNDYGERFSISR--QGDISLMQCLDYET----EDSYRFTVYATD---TL 121
            DL   V Y + +   + F       G++SL++ LDYE     E +  F V A D   T+
Sbjct: 824 VDLGANVSYRIRSPEVKHFFALHPFTGELSLLRSLDYEAFPDQEATITFLVEAFDIYGTM 883

Query: 122 MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDK----GD 177
               ATV + V ++ND+ P F    Y+  +      D   G+ I  V A D D       
Sbjct: 884 PPGIATVTVIVKDMNDYPPVFSKRLYKGMV----APDAVKGTPITTVYAEDADPPGLPAS 939

Query: 178 RVTLSLRG---PY-EKMFSIN-DSGH-ISIVDLSALNTSTIQLVVVATDTGNP 224
           RV   +     PY   +F +  DSG  I+ V+L+   T+  +LVVVA D G P
Sbjct: 940 RVRYRVDDVLYPYPASIFDVEEDSGRVITRVNLNEEPTTIFKLVVVAFDDGEP 992



 Score = 45.1 bits (105), Expect = 0.056,   Method: Compositional matrix adjust.
 Identities = 53/193 (27%), Positives = 95/193 (49%), Gaps = 10/193 (5%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSN-DYGERFSISRQ-GDISLMQ 101
           +F +  YS+   E + +  VLL +         ++Y + N D    F++S   G ++L +
Sbjct: 593 RFPQLMYSLEISEAMRIGAVLLNLQATDREGDPIRYAIENGDPQGVFNLSETTGILTLGK 652

Query: 102 CLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLP-HIPLADLT 160
            LD E+ D Y   + A+D     ++T  ++VV  +  D     P ++ +LP ++ + +  
Sbjct: 653 ALDRESTDRYILIITASDGRPDGTSTATVNVVVTDVND---NAPVFDPYLPRNLSVVEEE 709

Query: 161 PGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDSGHI-SIVDLSALNTSTIQLVVV 217
             + +G+V A D D G   +V  SL G +  +F I  +G I + V L+       +LVVV
Sbjct: 710 ANAFVGQVRATDPDAGINGQVYYSL-GNFNNLFRITSNGSIYTAVKLNREVRDYYELVVV 768

Query: 218 ATDTGNPPRQASV 230
           ATD    PR +++
Sbjct: 769 ATDGAVHPRHSTL 781



 Score = 44.3 bits (103), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 49/171 (28%), Positives = 80/171 (46%), Gaps = 17/171 (9%)

Query: 76  RVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDTLM---TTSATVNISV 132
           +V Y L N +   F I+  G I     L+ E  D Y   V ATD  +    ++ T+ I V
Sbjct: 729 QVYYSLGN-FNNLFRITSNGSIYTAVKLNREVRDYYELVVVATDGAVHPRHSTLTLAIKV 787

Query: 133 VNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEK-MF 191
           ++++D  P F    Y + +      +L  G+   ++EA D D G  V+  +R P  K  F
Sbjct: 788 LDIDDNSPVFTNSTYTVVVEE----NLPAGTTFLRIEAKDVDLGANVSYRIRSPEVKHFF 843

Query: 192 SIND-SGHISI---VDLSAL--NTSTIQLVVVATDTGN--PPRQASVPAIM 234
           +++  +G +S+   +D  A     +TI  +V A D     PP  A+V  I+
Sbjct: 844 ALHPFTGELSLLRSLDYEAFPDQEATITFLVEAFDIYGTMPPGIATVTVIV 894


>gi|256082496|ref|XP_002577491.1| cadherin [Schistosoma mansoni]
          Length = 877

 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 53/180 (29%), Positives = 89/180 (49%), Gaps = 22/180 (12%)

Query: 89  FSISRQGDISLMQCLDYETEDSYRFTVYATDT------LMTTSATVNISVVNVNDWDPRF 142
           F ++  G +   + +D ET  ++   V ATD        +T +A V+I+++++ND +P F
Sbjct: 588 FQVTEDGYVKATKSIDRETHPAFLLQVLATDNPQTPEKQLTATAQVHITILDINDNEPVF 647

Query: 143 RYPQYELFLPHIPLA-DLTPGSVIGKVEAADGDKG--DRVTLSL--RGPYEKMFSIND-S 196
           + P ++     + ++ +  PG +I KVEA D D G   ++  S   +     MF I + +
Sbjct: 648 QRPPFDNGTNEVEISYNDVPGHLITKVEAIDKDIGANGKILFSFNHKQSINPMFVIRENT 707

Query: 197 GHISI-VDLSALNTSTIQLVVVATDTGNPPRQ---------ASVPAIMHFPEAIVQQASS 246
           G I +  +LS  +  TI LV++ATD G  PR          +  P  M    A+ QQ SS
Sbjct: 708 GEIFLQKELSIKDIGTIPLVILATDMGLVPRTTTTTIFIKISDRPTNMFRFNALNQQDSS 767


>gi|47227865|emb|CAG09028.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 1753

 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 68/205 (33%), Positives = 90/205 (43%), Gaps = 19/205 (9%)

Query: 45  FSKNEYSVSALENLPVNYVLLTV------TTNKPRDLRVKYWLSNDY-GERFSI-SRQGD 96
           F    Y V   E  P+N   L V      T        + Y L  D     F I S  G 
Sbjct: 246 FDTLSYRVELKEGTPINKRFLQVRALNRETPGSGYSSPLSYHLRPDGDSAAFGIASDSGW 305

Query: 97  ISLMQCLDYETEDSYRFTVYATDT----LMTTSATVNISVVNVNDWDPRFRYPQYELFLP 152
           + +   LD E +D Y  TV AT        T SATV +S+ + ND  PRF   Q  +F+ 
Sbjct: 306 LFVKSTLDREVKDMYLLTVLATQGHGQLKKTGSATVRVSLTDENDNSPRFT--QDRVFM- 362

Query: 153 HIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPY-EKMFSIN-DSGHISIVD-LSALNT 209
                +L  G+  G V AAD D G    LS R  + ++ F IN  +G +S    L     
Sbjct: 363 -AVKENLPAGTGFGHVSAADRDAGPNGRLSYRLLHPDRHFQINPHTGEMSTKTVLDREQQ 421

Query: 210 STIQLVVVATDTGNPPRQASVPAIM 234
           S+ QLVV+  D G+PPR A+  A +
Sbjct: 422 SSYQLVVLVQDGGSPPRSATGTAFI 446



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 56/193 (29%), Positives = 96/193 (49%), Gaps = 16/193 (8%)

Query: 47  KNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWL-SNDYGERFSIS-RQGDISLMQ 101
           ++  SVS +E+ PV +V L V     ++  + RV Y + S + G +FS++   G +S+++
Sbjct: 782 RSPASVSVMEDQPVGFVALYVKATDADEGENGRVTYRIQSGNTGGKFSLNPNTGSLSILK 841

Query: 102 CLDYETEDSYRFTVYATDTLM---TTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLAD 158
            LD E +D +  T+ A D  M   +++  + + V++VND  P F   QYE  +      +
Sbjct: 842 PLDREEQDIFNLTITAEDHGMPQQSSAQLLCVHVIDVNDEVPWFEETQYEAQVSE----N 897

Query: 159 LTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSGHISIVDLSALNTSTIQ---LV 215
              G+ +  V A+D D G    ++  G  E+ F+IN    + I    AL+    +   + 
Sbjct: 898 QPSGTSVLTVSASDLDLGPNGQVTYSGISEEDFNINPVTGV-ITTTKALDRELREYYTVT 956

Query: 216 VVATDTGNPPRQA 228
           V A D G PP  A
Sbjct: 957 VYAKDGGLPPNYA 969



 Score = 55.5 bits (132), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 66/232 (28%), Positives = 107/232 (46%), Gaps = 17/232 (7%)

Query: 13  LVVRAIQYDNQ-DRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNK 71
           L V A Q   Q  +   AT+ VS    +    +F+++   ++  ENLP       V+   
Sbjct: 322 LTVLATQGHGQLKKTGSATVRVSLTDENDNSPRFTQDRVFMAVKENLPAGTGFGHVSAAD 381

Query: 72  PRDL----RVKYWLSNDYGERFSIS-RQGDISLMQCLDYETEDSYRFTVYATDTL---MT 123
            RD     R+ Y L +     F I+   G++S    LD E + SY+  V   D      +
Sbjct: 382 -RDAGPNGRLSYRLLHP-DRHFQINPHTGEMSTKTVLDREQQSSYQLVVLVQDGGSPPRS 439

Query: 124 TSATVNISVVNVNDWDPRFRY-PQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTL- 181
            + T  I+V++ ND DP F + P  +  +  +  +  + G ++G ++A D D+G+  T+ 
Sbjct: 440 ATGTAFITVLDDNDNDPAFTHSPSGKKLILQVTESQ-SSGVLVGTLQAKDPDEGENGTVF 498

Query: 182 -SLRGPYEKMFSIN-DSGHISIVDLSAL-NTSTIQLVVVATDTGNPPRQASV 230
            SL GP    FS+N +SG +      +    +   L+V ATD G PPR  S 
Sbjct: 499 YSLIGPRADRFSLNPNSGELHSSSALSHSERAEYSLMVTATDRGQPPRSTSC 550



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 69/227 (30%), Positives = 105/227 (46%), Gaps = 22/227 (9%)

Query: 29   ATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDL------RVKYWLS 82
            AT+ VS    +    QF  + Y+    E++P+   +L V   K  DL      RV Y+LS
Sbjct: 1075 ATVEVSVLDINDHSPQFESSAYTADIPEDIPIGSHVLDV---KATDLDQGPNSRVLYFLS 1131

Query: 83   NDYGERFSISRQ-GDISLMQCLDYETEDSYRFTVYATDTL----MTTSATVNISVVNVND 137
            +     F I +  G I     LD E   SY F V ATD+       ++A V ISV +VND
Sbjct: 1132 SSSHSSFIIDQDTGSIITAAPLDREKIASYTFKVCATDSSPLNPRNSTAEVTISVQDVND 1191

Query: 138  WDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR--GPYEKMFSIND 195
              P F     +  + ++ +  ++   V+  + A D D G   ++  R   P  K F+IN 
Sbjct: 1192 NAPFFIQ---DPLIVNVSIGSVSSRRVLATMRAEDKDFGANGSVFYRFANPV-KGFTINS 1247

Query: 196  -SGHISIVD-LSALNTSTIQLVVVATDTGNPPRQASVPAIMHFPEAI 240
             +G I   + L +L+ S   L+V A D GNP + +    I++  E I
Sbjct: 1248 LTGDIQATEKLQSLSQSQRTLIVQAMDQGNPAQSSLGVVIIYLREQI 1294



 Score = 46.6 bits (109), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 69/253 (27%), Positives = 111/253 (43%), Gaps = 40/253 (15%)

Query: 2    INEDDF-LQPITLVV---RAIQYDNQDRYALATLI--------VSKAGTSLRELQ----- 44
            I+E+DF + P+T V+   +A+  + ++ Y +             +KA   +R L      
Sbjct: 925  ISEEDFNINPVTGVITTTKALDRELREYYTVTVYAKDGGLPPNYAKATVRIRVLDENDNT 984

Query: 45   --FSKNEYSVSALENLPVNYVLLTVTTN-----KPRDLRVKYWLSNDYGERFSISRQGDI 97
              F +  YS+   ENL     L T+  N     K   +  K  + +  G+       G +
Sbjct: 985  PYFGRLYYSIEVPENLEA-MPLFTLRANDQDSGKSGIINYKITVGDSSGDFHLDKLSGVL 1043

Query: 98   SLMQCLDYETEDSYRFTVYATDTL---MTTSATVNISVVNVNDWDPRFRYPQYELFLPHI 154
            S  + LD E    Y  TV A D     ++++ATV +SV+++ND  P+F    Y   +P  
Sbjct: 1044 STSRPLDREVRARYMLTVTAQDQGHPPLSSTATVEVSVLDINDHSPQFESSAYTADIPE- 1102

Query: 155  PLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIN-DSGHISIVDLSALNTST 211
               D+  GS +  V+A D D+G   RV   L       F I+ D+G  SI+  + L+   
Sbjct: 1103 ---DIPIGSHVLDVKATDLDQGPNSRVLYFLSSSSHSSFIIDQDTG--SIITAAPLDREK 1157

Query: 212  IQ---LVVVATDT 221
            I      V ATD+
Sbjct: 1158 IASYTFKVCATDS 1170



 Score = 43.9 bits (102), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 56/221 (25%), Positives = 91/221 (41%), Gaps = 9/221 (4%)

Query: 12   TLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNK 71
            TL+V+A+   N  + +L  +I+       R ++FS+    V+  EN     V+       
Sbjct: 1267 TLIVQAMDQGNPAQSSLGVVIIYLREQIYRGIRFSRTTRDVTLQENALKGTVITQTQARY 1326

Query: 72   PRDLRVKYWLSNDYGER---FSISR-QGDISLMQC--LDYETEDSYRFTVYATDTLMTTS 125
            P   ++    S   G R   F I+   G+I + +   LD+E     R  V A     ++ 
Sbjct: 1327 PDGSQIGITYSIFNGNRMQSFGINTITGEIWVQKSEGLDFEETPKLRLVVKAESASSSSY 1386

Query: 126  ATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRG 185
              VNI + +VND  PRF+   Y  ++      D  P   +  V+   G  G  +      
Sbjct: 1387 MAVNIILQDVNDNLPRFQLQNYVAYIREAQGYDF-PIIQVAAVDLDQGQNGQVIYSLRSS 1445

Query: 186  PYEKMFSIND-SGHISIVDLSALNTST-IQLVVVATDTGNP 224
                +F I+  +G I+   +      T  +LVV ATD G P
Sbjct: 1446 SRSGLFKIDPLTGSITTAAIMDREIWTETKLVVTATDRGTP 1486



 Score = 43.9 bits (102), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 36/107 (33%), Positives = 50/107 (46%), Gaps = 13/107 (12%)

Query: 87   ERFSISR-QGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYP 145
            + F I R  G +SL   LDYE    Y  TV  +D+   + A + + V +VND  P F   
Sbjct: 1552 DMFGIHRYGGGVSLTGPLDYEERTWYTVTVSTSDSKHHSEANLTVLVDDVNDNAPTFTQD 1611

Query: 146  QYELFLP-HIPLADLTPGSVIGKVEAADGDKGD------RVTLSLRG 185
             Y++ +  H+P      GS +  V A D D GD      RV  S +G
Sbjct: 1612 MYQVTVAEHLPA-----GSAVVTVTATDRDSGDNGKIIYRVMSSTKG 1653



 Score = 41.6 bits (96), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 45/155 (29%), Positives = 70/155 (45%), Gaps = 16/155 (10%)

Query: 92  SRQGDISLMQCLDYETEDSYRFTVYATDTLMT------TSATVNISVVNVNDWDPRFRYP 145
           S  G +S+ Q LD+E   S    V ATD+         +S T  + + + ND  P FR P
Sbjct: 725 SSTGVLSIAQKLDHEVTPSLILVVKATDSAHDASLRRWSSVTARVYITDENDNPPVFRSP 784

Query: 146 QYELFLPHIPLADLTPGSVIGKVEAADGDKGD--RVTLSLR-GPYEKMFSIN-DSGHISI 201
                +   P+     G V   V+A D D+G+  RVT  ++ G     FS+N ++G +SI
Sbjct: 785 ASVSVMEDQPV-----GFVALYVKATDADEGENGRVTYRIQSGNTGGKFSLNPNTGSLSI 839

Query: 202 VD-LSALNTSTIQLVVVATDTGNPPRQASVPAIMH 235
           +  L         L + A D G P + ++    +H
Sbjct: 840 LKPLDREEQDIFNLTITAEDHGMPQQSSAQLLCVH 874



 Score = 41.2 bits (95), Expect = 0.86,   Method: Compositional matrix adjust.
 Identities = 56/204 (27%), Positives = 88/204 (43%), Gaps = 17/204 (8%)

Query: 45  FSKNEYSVSALENL----PVNYVLLTVTTNKPRDLRVKYWLSNDYGERFSISRQGDISLM 100
           F   +Y  S  E++     V  V  +V T+  RD+       +  G        G +   
Sbjct: 36  FEHTQYYFSVPEDVLRGTVVGIVRASVKTDSSRDISYTISSGDPVGYITVDPDSGALRTS 95

Query: 101 QCLDYETEDSYRFTVYAT--DTLMTTSATVNISVVNVNDWDPRFRYPQYE-LFLPHIPLA 157
             LD+E + S    V A   +        V+IS+ ++ND  P F    YE L LP     
Sbjct: 96  LPLDHEAQPSLDLEVQARSGNPPAFGQTRVHISITDINDNPPVFSPSSYESLLLPE---- 151

Query: 158 DLTPGSVIGKVEAADGDKG--DRVTLSLRGPY--EKMFSIN-DSGHISIV-DLSALNTST 211
               G+V+ +V+A D D G   +++  L  P   ++ FSI+  SG I +V  L   +T  
Sbjct: 152 PTEMGTVVYRVQAEDQDSGANGQLSFDLYSPSGTQRSFSIDRSSGEIRLVGSLRYESTPR 211

Query: 212 IQLVVVATDTGNPPRQASVPAIMH 235
             L V+A D+G P   A+   ++H
Sbjct: 212 YDLQVIAKDSGVPQLSATFVLVVH 235


>gi|301770721|ref|XP_002920779.1| PREDICTED: protocadherin Fat 3-like [Ailuropoda melanoleuca]
          Length = 4557

 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 68/204 (33%), Positives = 95/204 (46%), Gaps = 25/204 (12%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDL----RVKYWLSNDYGERFSISR-QGDISL 99
            F  + YSV  LE+LPV  V+  + T+ P DL    +V+Y L NDY  RF I +  G I L
Sbjct: 936  FIPSSYSVKVLEDLPVGTVIAWLETHDP-DLGLGGQVRYSLVNDYNGRFEIDKASGAIRL 994

Query: 100  MQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIP---- 155
             + LDYE +  Y  TV A D          +S+ +V+  +         L  P+ P    
Sbjct: 995  SKELDYEKQQFYNLTVRAKDKGRP------VSLSSVSFVEVEVVDVNENLHTPYFPDFAV 1048

Query: 156  LADLTPGSVIG----KVEAADGDKG--DRVTLSLR-GPYEKMFSIND-SGHISIVD-LSA 206
            +  +   S IG    +V A D D G    +  S+R G     F+I+D SG IS  D L  
Sbjct: 1049 VGSVKENSRIGTSVLQVAAQDDDSGRDGEIQYSIRDGSGLGRFNIDDESGVISTADILDR 1108

Query: 207  LNTSTIQLVVVATDTGNPPRQASV 230
              T +  L V ATD G  P  +++
Sbjct: 1109 ETTGSYWLTVYATDRGVVPLYSTI 1132



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 59/195 (30%), Positives = 94/195 (48%), Gaps = 16/195 (8%)

Query: 43  LQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLS-NDYGERFSIS-RQGDISLM 100
           ++F K  Y VS  E  P   V+  V  + P  L V+Y LS  +  + F I+ R G I   
Sbjct: 374 VKFEKEMYDVSISEFSPPGVVVAIVKLS-PEPLDVEYKLSPGEDAQYFKINPRSGLIVTA 432

Query: 101 QCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFL-PHIPLADL 159
           Q L+   ++ Y+  V  T+      A V + + + ND  P F+ P Y+ F+   +P+   
Sbjct: 433 QPLNTIKKEVYKLGV--TNKEGDLKAQVTVGIEDANDHTPEFQQPLYDAFVNESVPV--- 487

Query: 160 TPGSVIGKVEAADGDKGDR--VTLSLRGPYEKMFSIND-SGHISIVDLSALNTS--TIQL 214
             G+ +  V A+D DKG+   +T S+       F+IN  +G IS  +     +S  T + 
Sbjct: 488 --GTSVLMVSASDKDKGENGYITYSIASLNLLPFAINQFTGVISTTEELDFESSPETYRF 545

Query: 215 VVVATDTGNPPRQAS 229
           +V A+D G+P R  S
Sbjct: 546 IVRASDWGSPYRHES 560



 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 71/255 (27%), Positives = 109/255 (42%), Gaps = 33/255 (12%)

Query: 3    NEDDFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQ----------------FS 46
            N++ FL P +  ++ +   +++R  + +LI        R  Q                FS
Sbjct: 3073 NDEFFLDPESGELKTLALLDRERVPMYSLIARATDGGGRFCQSDIHLILEDVNDNPPVFS 3132

Query: 47   KNEYSVSALENLPVNYVLLTVTTNKPR---DLRVKYWLSNDYGERFSISRQGDIS-LMQC 102
             + Y+    EN     +L  V    P    + +V Y L++     FSI     I  L Q 
Sbjct: 3133 SDHYNACVYENTATKALLTRVQAVDPDVGINRKVVYSLADSANGFFSIDSSSGIIILEQP 3192

Query: 103  LDYETEDSYRFTVYATD----TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLAD 158
            LD E + SY  +V ATD      +++ ATV I+V+++ND  P F    Y + +P     D
Sbjct: 3193 LDREQQPSYNISVQATDQSPGQALSSLATVTITVLDINDNPPVFERRDYLVTVPE----D 3248

Query: 159  LTPGSVIGKVEAADGDKGD--RVTLSLR-GPYEKMFSIN-DSGHISIVD-LSALNTSTIQ 213
             +PG+ +  V A   D G    +T  +R G  +  F IN  +G IS+ + L         
Sbjct: 3249 TSPGTQVLAVFATSKDIGTNAEITYLIRSGNEQGRFRINPKTGGISVSEVLDYELCKKFF 3308

Query: 214  LVVVATDTGNPPRQA 228
            LVV A D G P   A
Sbjct: 3309 LVVEAKDGGTPALSA 3323



 Score = 47.8 bits (112), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 41/137 (29%), Positives = 60/137 (43%), Gaps = 8/137 (5%)

Query: 103  LDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPG 162
            LD E +D Y   + ATD L  T A V ++V +VND  P      Y    P     D++  
Sbjct: 2990 LDREEQDIYFLNITATDGLFVTQAMVEVTVSDVNDNSPVCEQVAYTALFPE----DISSN 3045

Query: 163  SVIGKVEAADGDKGDR--VTLSLRGPYEKMFSIN-DSGHI-SIVDLSALNTSTIQLVVVA 218
             +I KV A D D G    +  SL G     F ++ +SG + ++  L         L+  A
Sbjct: 3046 KIILKVSAKDADIGSNGDIRYSLYGSGNDEFFLDPESGELKTLALLDRERVPMYSLIARA 3105

Query: 219  TDTGNPPRQASVPAIMH 235
            TD G    Q+ +  I+ 
Sbjct: 3106 TDGGGRFCQSDIHLILE 3122



 Score = 47.4 bits (111), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 57/191 (29%), Positives = 87/191 (45%), Gaps = 25/191 (13%)

Query: 73   RDLRVKYWLSNDYG-ERFSISRQ-GDISLMQCLDYETEDSYRFTVYATD---TLMTTSAT 127
            RD  ++Y + +  G  RF+I  + G IS    LD ET  SY  TVYATD     + ++  
Sbjct: 1074 RDGEIQYSIRDGSGLGRFNIDDESGVISTADILDRETTGSYWLTVYATDRGVVPLYSTIE 1133

Query: 128  VNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR--- 184
            V I + +VND  P    P Y   +      D+   SVI +++A D D      L+ R   
Sbjct: 1134 VYIEIEDVNDNAPLTSEPIYYPVVMENSPKDV---SVI-QIQAEDPDSSSNEKLTYRITS 1189

Query: 185  GPYEKMFSIN-DSGHISIVD--LSALNTSTIQLVVVATDTGNPPRQASVPAIM------- 234
            G  +  F+IN  +G I+     L     +   L V  TD G+ P+Q+++  ++       
Sbjct: 1190 GNPQNFFAINTKTGLITTTSRKLDREQQAEHFLEVTVTDGGSSPKQSTIWVVVQVLDEND 1249

Query: 235  ---HFPEAIVQ 242
                FPE + Q
Sbjct: 1250 NKPQFPEKVYQ 1260



 Score = 46.2 bits (108), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 55/196 (28%), Positives = 92/196 (46%), Gaps = 22/196 (11%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVK----YWLSNDYGERFSISRQ-GDISL 99
            F++++YS +  E+  +   + T+     +++R          N+ G  F I ++ G I L
Sbjct: 2708 FTQSQYSFTVSEDTAIGSTVDTLRILPSQNVRFSTVNGERPENNKGGVFIIEQETGTIKL 2767

Query: 100  MQCLDYETEDSYRFTVYATDTL----MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIP 155
             + LD+E   S+ F V AT  L    +  +  V+I V+++ND  P F    YE  +    
Sbjct: 2768 DKRLDHEVSPSFHFKVAATIPLDKVDIVFTVDVDIKVMDLNDNKPVFETSSYETII---- 2823

Query: 156  LADLTPGSVIGKVEAADGDKG--DRVTLSLRG---PYEKMFSIN---DSGHISIV-DLSA 206
            +  +  G+ + +V A D D G   +VT SL     P + M + N   ++G IS + DL  
Sbjct: 2824 MEGMPVGTKLTQVRAIDMDWGANGQVTYSLHSDSQPEKVMEAFNIDSNTGWISTLKDLDH 2883

Query: 207  LNTSTIQLVVVATDTG 222
                T    VVA+D G
Sbjct: 2884 ETDPTFTFSVVASDLG 2899



 Score = 43.9 bits (102), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 41/146 (28%), Positives = 73/146 (50%), Gaps = 17/146 (11%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTT---NKPRDLRVKYWLSNDYG-----ERFSI-SRQG 95
            F  + Y    +E +PV   L  V     +   + +V Y L +D       E F+I S  G
Sbjct: 2814 FETSSYETIIMEGMPVGTKLTQVRAIDMDWGANGQVTYSLHSDSQPEKVMEAFNIDSNTG 2873

Query: 96   DISLMQCLDYETEDSYRFTVYATDT----LMTTSATVNISVVNVNDWDPRFRYPQYELFL 151
             IS ++ LD+ET+ ++ F+V A+D      ++++A V++ V ++ND  P F    +E++ 
Sbjct: 2874 WISTLKDLDHETDPTFTFSVVASDLGEAFSLSSTALVSVKVTDINDNAPVF---AHEVYR 2930

Query: 152  PHIPLADLTPGSVIGKVEAADGDKGD 177
             ++  +D  PG V+  +   D D  D
Sbjct: 2931 GNVKESD-PPGEVVAVLSTWDRDTSD 2955



 Score = 43.1 bits (100), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 41/146 (28%), Positives = 64/146 (43%), Gaps = 9/146 (6%)

Query: 95   GDISLMQCLDYETEDSYRFTVYATDTL-MTTSATVNISVVNVNDWDPRFRYPQYELFLPH 153
            G I+  + LDYE   SY+  V AT+   M ++ TVNI +V+ ND  P F + QY   L  
Sbjct: 1721 GVITTRKALDYERTSSYQLIVQATNMAGMASNVTVNIQIVDENDNAPVFLFSQYSGSLSE 1780

Query: 154  IP-----LADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSGHISIVDLSALN 208
                   +  L    ++ +   AD ++   +   +     K F   DS   +I  ++ L+
Sbjct: 1781 AAPVNSIVRSLDNSPLVIRATDADSNRNALLVYQIVESTAKKFFTVDSSTGAIRTIANLD 1840

Query: 209  TSTI---QLVVVATDTGNPPRQASVP 231
              TI      V   D+G+P   A  P
Sbjct: 1841 HETIAHFHFHVHVRDSGSPQLTAESP 1866



 Score = 41.6 bits (96), Expect = 0.71,   Method: Compositional matrix adjust.
 Identities = 67/231 (29%), Positives = 105/231 (45%), Gaps = 27/231 (11%)

Query: 27   ALATLIVSKAGTSLRELQFSKNEYSVSALEN-LPVNYVLLTVTTNKPRDLRVKYWLSNDY 85
            ++ T++V +A  S   L F+++ YS S  EN   +  V +        +  +KY + N  
Sbjct: 1966 SMVTILVKEAMDS--GLHFTQSFYSTSISENNTNITKVAIVNAIGNRLNEPLKYSILNP- 2022

Query: 86   GERFSI-SRQGDISLMQC-LDYETEDSYRFTVYAT---DTLMTTSATVNISVVNVNDWDP 140
            G +F I S  G I       D E ++ Y   V A+   D L      V +++ ++ND  P
Sbjct: 2023 GNKFKIKSTSGVIQTTGVPFDREEQELYELVVEASRELDHLRVARVVVRVNIEDINDNSP 2082

Query: 141  RFRYPQYELFLPHIPLA--DLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIN-D 195
             F      + LP+      D  PG++I +V A D DKG    VT  L+  Y   F IN +
Sbjct: 2083 VF------VGLPYYAAVQVDAEPGTLIYQVTAIDKDKGANGEVTYILQDDY-GHFEINPN 2135

Query: 196  SGHISIVDLSALNTSTIQ--LVVVATDTGNPPRQASVPAIMHFPEAIVQQA 244
            SG++ + +    + S I+  + V+A D G P    SV      P  IV +A
Sbjct: 2136 SGNVILKEAFNSDLSNIEYGVTVLAKDGGKPSLSTSV----ELPITIVNKA 2182



 Score = 40.4 bits (93), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 56/193 (29%), Positives = 87/193 (45%), Gaps = 17/193 (8%)

Query: 45   FSKNEYSVSALENL-PVNYVLLTVTTNKP--RDLRVKYWL--SNDYGERFSIS-RQGDIS 98
            F + +Y V+  E+  P   VL    T+K    +  + Y +   N+ G RF I+ + G IS
Sbjct: 3236 FERRDYLVTVPEDTSPGTQVLAVFATSKDIGTNAEITYLIRSGNEQG-RFRINPKTGGIS 3294

Query: 99   LMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIP 155
            + + LDYE    +   V A D     ++  AT++I+V +VND  PRF    Y   +    
Sbjct: 3295 VSEVLDYELCKKFFLVVEAKDGGTPALSAVATISINVTDVNDNPPRFSQDTYSAVISEDA 3354

Query: 156  LADLTPGSVIGKV-EAADGDKGDRVTLSL-RGPYEKMFSINDS-GHISI-VDLSALNTST 211
            L      SVI  V E AD     ++  S+  G  +  F++    G + +   L     S 
Sbjct: 3355 LVG---DSVILLVAEDADSQPNGQIRFSIVNGDRDNEFAVEPVLGLVKVKKKLDRERVSG 3411

Query: 212  IQLVVVATDTGNP 224
              L+V A D+G P
Sbjct: 3412 YSLLVQAVDSGIP 3424



 Score = 40.0 bits (92), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 54/201 (26%), Positives = 82/201 (40%), Gaps = 18/201 (8%)

Query: 44   QFSKNEYSVSALEN-LPVNYVLLTVTTNKPRDLRVKYWLSNDYG----ERFSIS-RQGDI 97
            +FS+  Y V+  E+ LP   +L    T++    ++ Y + +        +F I    G +
Sbjct: 1459 EFSQPNYDVTISEDVLPDTEILQIEATDRDEKHKLSYSVHSSIDSASMRKFRIDPGTGVL 1518

Query: 98   SLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHI 154
              ++ LD+E +D +   V   D         A V ++V + ND  P F  P YE  +   
Sbjct: 1519 YTVERLDHEAQDKHILNVMVRDQEFPYRRNLARVIVNVEDANDHSPYFTNPLYEASV--- 1575

Query: 155  PLADLTPGSVIGKVEAADGDKGDRVTLSL---RGPYEKMFSINDSGHISIVDLSALNTST 211
                   GS I +V A D DKG+   L      G     F I     I  +      T+T
Sbjct: 1576 -FESAALGSAILQVTALDKDKGENAELIYTIEAGNTGNTFKIEPVLGIITLSKEPDMTTT 1634

Query: 212  IQLV--VVATDTGNPPRQASV 230
             Q V  V  TD G+PP  A+ 
Sbjct: 1635 GQFVLSVRVTDQGSPPMSATA 1655



 Score = 39.7 bits (91), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 53/198 (26%), Positives = 89/198 (44%), Gaps = 17/198 (8%)

Query: 45   FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSN-DYGERFSIS-RQGDISLMQC 102
            F K  Y+ S  E++ ++  +L++    P    + Y + + D  ++F+I    G + ++  
Sbjct: 2186 FDKPFYTASVNEDIRMDTPILSINATSPEGQGIIYIIIDGDLYKQFNIDFDTGVLKVVSP 2245

Query: 103  LDYETEDSYRFTVYATDTLMTTSA--TVNISVVNVNDWDPRFRYPQYELFLPHIPLADLT 160
            LDYE    Y+ TV A+D L    A  TV++ V +VND  P F  P Y   L    L    
Sbjct: 2246 LDYEITSVYKLTVRASDALTGARAEVTVDMLVNDVNDNPPIFDQPTYNTTLSEASLI--- 2302

Query: 161  PGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDSGHIS-----IVDLSALNTSTIQ-- 213
             G+ + +V + D D  +   +  +   +  ++  D  HI      I+    L+   +Q  
Sbjct: 2303 -GTPVLQVVSTDADSENNKLVHYQ-IVQDTYNSTDYFHIDSASGLILTARMLDHELVQHC 2360

Query: 214  -LVVVATDTGNPPRQASV 230
             L V ATD G P   + V
Sbjct: 2361 ILKVRATDNGFPSLSSEV 2378



 Score = 39.3 bits (90), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 26/90 (28%), Positives = 43/90 (47%), Gaps = 4/90 (4%)

Query: 95   GDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHI 154
            G I + + LD E    Y  +V  TD        V I V++ ND  P F  P Y++ +   
Sbjct: 1413 GTIVIAKPLDAEQRSIYNMSVEVTDGTNVAVTQVFIKVLDNNDNGPEFSQPNYDVTISE- 1471

Query: 155  PLADLTPGSVIGKVEAADGDKGDRVTLSLR 184
               D+ P + I ++EA D D+  +++ S+ 
Sbjct: 1472 ---DVLPDTEILQIEATDRDEKHKLSYSVH 1498


>gi|395820725|ref|XP_003783711.1| PREDICTED: protocadherin-15 isoform 14 [Otolemur garnettii]
          Length = 1889

 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 51/189 (26%), Positives = 90/189 (47%), Gaps = 23/189 (12%)

Query: 6   DFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVL- 64
           DF Q   LV++A Q +     A A+L +     + +   F+K+ Y    LE+ PV   + 
Sbjct: 319 DFHQKFDLVIKAEQDNGHPLPAFASLHIEILDENNQSPYFTKSSYQGYILESAPVGATIS 378

Query: 65  --LTVTT-----------NKPRDLRVKYWLSNDYGERFSISRQG---DISLMQCLDYETE 108
             L +TT              +D  +  +L NDY   F++++ G    ++L+Q +D E +
Sbjct: 379 DSLNLTTPLRIVALDKDIEDTKDPELHLFL-NDYTSVFTVTQTGITRYLTLLQPVDREEQ 437

Query: 109 DSYRFTVYATDTLMTTSAT-VNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGK 167
            +Y F++ A D +  +    VNI V++ ND  P F    Y +++      D+ PG  + +
Sbjct: 438 QTYTFSITAFDGVQESEPVIVNIRVMDANDNTPTFPEISYNVYV----YTDMNPGDSVIQ 493

Query: 168 VEAADGDKG 176
           + A D D+G
Sbjct: 494 LTAVDADEG 502



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 70/233 (30%), Positives = 101/233 (43%), Gaps = 26/233 (11%)

Query: 13  LVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKP 72
           LVV A       R++  TL +           F+ + Y+V   ENLP     L +   K 
Sbjct: 750 LVVVATDGAVHPRHSTLTLAIKVLDIDDNSPVFTNSTYTVVVEENLPAGTTFLRIEA-KD 808

Query: 73  RDL--RVKYWLSNDYGERFSISR--QGDISLMQCLDYET----EDSYRFTVYATD---TL 121
            DL   V Y + +   + F       G++SL++ LDYE     E +  F V A D   T+
Sbjct: 809 VDLGANVSYRIRSPEVKHFFALHPFTGELSLLRSLDYEAFPDQEATITFLVEAFDIYGTM 868

Query: 122 MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDK----GD 177
               ATV + V ++ND+ P F    Y+  +      D   G+ I  V A D D       
Sbjct: 869 PPGIATVTVIVKDMNDYPPVFSKRLYKGMV----APDAVKGTPITTVYAEDADPPGLPAS 924

Query: 178 RVTLSLRG---PY-EKMFSIN-DSGH-ISIVDLSALNTSTIQLVVVATDTGNP 224
           RV   +     PY   +F +  DSG  I+ V+L+   T+  +LVVVA D G P
Sbjct: 925 RVRYRVDDVLYPYPASIFDVEEDSGRVITRVNLNEEPTTIFKLVVVAFDDGEP 977



 Score = 45.1 bits (105), Expect = 0.059,   Method: Compositional matrix adjust.
 Identities = 52/193 (26%), Positives = 94/193 (48%), Gaps = 10/193 (5%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSN-DYGERFSISRQ-GDISLMQ 101
           +F +  YS+   E + +  VLL +         ++Y + N D    F++S   G ++L +
Sbjct: 578 RFPQLMYSLEISEAMRIGAVLLNLQATDREGDPIRYAIENGDPQGVFNLSETTGILTLGK 637

Query: 102 CLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLP-HIPLADLT 160
            LD E+ D Y   + A+D     ++T  ++VV  +        P ++ +LP ++ + +  
Sbjct: 638 ALDRESTDRYILIITASDGRPDGTSTATVNVVVTDVN---DNAPVFDPYLPRNLSVVEEE 694

Query: 161 PGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSINDSGHI-SIVDLSALNTSTIQLVVV 217
             + +G+V A D D G   +V  SL G +  +F I  +G I + V L+       +LVVV
Sbjct: 695 ANAFVGQVRATDPDAGINGQVYYSL-GNFNNLFRITSNGSIYTAVKLNREVRDYYELVVV 753

Query: 218 ATDTGNPPRQASV 230
           ATD    PR +++
Sbjct: 754 ATDGAVHPRHSTL 766



 Score = 43.9 bits (102), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 49/171 (28%), Positives = 80/171 (46%), Gaps = 17/171 (9%)

Query: 76  RVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDTLM---TTSATVNISV 132
           +V Y L N +   F I+  G I     L+ E  D Y   V ATD  +    ++ T+ I V
Sbjct: 714 QVYYSLGN-FNNLFRITSNGSIYTAVKLNREVRDYYELVVVATDGAVHPRHSTLTLAIKV 772

Query: 133 VNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEK-MF 191
           ++++D  P F    Y + +      +L  G+   ++EA D D G  V+  +R P  K  F
Sbjct: 773 LDIDDNSPVFTNSTYTVVVEE----NLPAGTTFLRIEAKDVDLGANVSYRIRSPEVKHFF 828

Query: 192 SIND-SGHISI---VDLSAL--NTSTIQLVVVATDTGN--PPRQASVPAIM 234
           +++  +G +S+   +D  A     +TI  +V A D     PP  A+V  I+
Sbjct: 829 ALHPFTGELSLLRSLDYEAFPDQEATITFLVEAFDIYGTMPPGIATVTVIV 879


>gi|26006279|dbj|BAC41482.1| mKIAA1775 protein [Mus musculus]
          Length = 856

 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 61/211 (28%), Positives = 94/211 (44%), Gaps = 28/211 (13%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTTNKPRDL----RVKYWLSNDYGERFSISRQGDISL 99
           +F +  Y +   EN+P    +  V     +D      V Y L N +  +FS+ R   +  
Sbjct: 133 RFIQEPYIIRVPENIPAGSSIFKVQAED-KDTGSGGSVTYSLQNLHSSKFSMDRHSGVLR 191

Query: 100 MQC---LDYETEDSYRFTVYA---------TDTLMTTSATVNISVVNVNDWDPRFRYPQY 147
           +Q    LDYE   ++  TV A          D + + + TV I+V +V D  P F    Y
Sbjct: 192 LQAGATLDYEKSRAHYITVIAKDGGGRLRGADMVFSATTTVTINVEDVQDTAPIFVGTPY 251

Query: 148 ELFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYEKMFSIND-SGHISIVDL 204
             ++      D  PGS +  V A DGD+G  + +   L    + +F IN+ SG IS++  
Sbjct: 252 YGYV----YEDTLPGSEVLTVVAIDGDRGKPNHILYRLLNESDGIFEINETSGAISVLQS 307

Query: 205 SA-LNTSTIQLVVVATDT---GNPPRQASVP 231
            A L     +L V  T+    G+P  QA+VP
Sbjct: 308 PALLRREVYELHVQVTEVNSPGSPAAQATVP 338



 Score = 43.5 bits (101), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 56/186 (30%), Positives = 85/186 (45%), Gaps = 17/186 (9%)

Query: 56  ENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGER--FSISRQ-GDISLMQCLDYETEDSYR 112
           E+ PV   + T+    P    + Y +S D   R  FS+    G+I+L++ LD E ED   
Sbjct: 45  EDTPVGSHVYTLNGTDPEGDPISYHISFDPSTRSVFSVDPNFGNITLVEELDREREDEIE 104

Query: 113 FTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAAD 172
             +  +D L   +  V I V + ND  PRF    Y + +P     ++  GS I KV+A D
Sbjct: 105 AIISISDGLNLVAEKVVILVTDANDEAPRFIQEPYIIRVPE----NIPAGSSIFKVQAED 160

Query: 173 GD--KGDRVTLSLRGPYEKMFSINDSGHISIVDLSALNTSTIQ------LVVVATDTGNP 224
            D   G  VT SL+  +   FS++   H  ++ L A  T   +      + V+A D G  
Sbjct: 161 KDTGSGGSVTYSLQNLHSSKFSMDR--HSGVLRLQAGATLDYEKSRAHYITVIAKDGGGR 218

Query: 225 PRQASV 230
            R A +
Sbjct: 219 LRGADM 224


>gi|410913711|ref|XP_003970332.1| PREDICTED: protocadherin alpha-11-like [Takifugu rubripes]
          Length = 823

 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 60/202 (29%), Positives = 94/202 (46%), Gaps = 29/202 (14%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRDLR------VKYWLSNDYGER----FSISRQ 94
           FSK  YSV   EN  ++ V++ V   K  DL       V+Y +  D        FS+ + 
Sbjct: 233 FSKEVYSVILQENAALDTVVMKV---KATDLDEGSNGDVEYVIGGDINTNAQGLFSLDKN 289

Query: 95  -GDISLMQCLDYETEDSYRFTVYATDTL---MTTSATVNISVVNVNDWDPRFRYPQYELF 150
            G+I L   +DYET D ++  V A+D     MTT   V I + +VND +P          
Sbjct: 290 TGEIRLKGKIDYETTDVFKLDVQASDKGQPPMTTDCRVIIKIQDVNDNEPHIEVTSITSM 349

Query: 151 LPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRG--PYEKMFSINDSGHISIVDLSA 206
           +P     D   G+V+  +   D D G   +VT SL G  P+E   S  ++ + S+V   +
Sbjct: 350 VPE----DSKHGTVVALISVTDSDSGLNGKVTCSLSGNVPFELKPSFKENMY-SLVTKES 404

Query: 207 LNTSTI---QLVVVATDTGNPP 225
           L+  ++    +++   D G+PP
Sbjct: 405 LDRESVSHYDILITVRDYGDPP 426



 Score = 41.2 bits (95), Expect = 0.79,   Method: Compositional matrix adjust.
 Identities = 53/216 (24%), Positives = 98/216 (45%), Gaps = 22/216 (10%)

Query: 81  LSNDYGERFSI-SRQGDISLMQCLDYETEDSYRFTVYA---TDTLMTTSATVNISVVNVN 136
           + ND     +I S  G IS ++  D+ET  +++F V A       ++++ TV + +++ N
Sbjct: 492 VQNDMAAFLNINSENGQISALKSFDFETLKTFQFQVVASDSGSPSLSSNVTVKVFILDQN 551

Query: 137 DWDPRFRYP----QYELFLPHIPLADLTPGSVIGKVEAADGDKG--DRVTLSLRGPYE-K 189
           D  P   YP         +  IP  ++  G ++ KV A D D G    +  SL+   +  
Sbjct: 552 DNAPVILYPVSSNGSAEGVEEIP-RNVNAGHLVTKVRAYDADIGYNGWLLFSLQQVSDHS 610

Query: 190 MFSIND-SGHI-SIVDLSALNTSTIQLVVVATDTGNPPRQASVPAIMHFPEAIVQQASSK 247
           +F ++  +G I ++   +  + +  +LV++  D GN    A+   ++   E     A+S 
Sbjct: 611 LFGLDRYTGQIRTLRSFTETDEAEHKLVILVKDNGNVSLSATATVMVKLVEPKEAFAASD 670

Query: 248 LNSGTSST--------VLIILGVVLIVLGFVIILLI 275
           L S             ++I LG V ++    II+LI
Sbjct: 671 LQSSAKDDEDSHVTFYLMITLGSVSVLFIISIIVLI 706


>gi|345319784|ref|XP_003430203.1| PREDICTED: protocadherin gamma-A4-like, partial [Ornithorhynchus
           anatinus]
          Length = 621

 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 61/221 (27%), Positives = 98/221 (44%), Gaps = 23/221 (10%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKY---WLSNDYGERFSISR-QGDI 97
           F+++ Y V   EN PV   ++TV    P +     V Y    +++     F +++  G+I
Sbjct: 51  FTQSVYQVMVRENAPVGTQVVTVNATDPDEGVNSEVTYSFRKITDKTSRIFQLNKVTGEI 110

Query: 98  SLMQCLDYETEDSYRFTVYATDTL-MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPL 156
           S ++ LDY+  + Y   V A D   +   A V +++++VND  P          +P    
Sbjct: 111 STLRNLDYQDSEYYEMEVQAQDGPGLLARAKVQVTIIDVNDNAPEVTITSLTSSVPE--- 167

Query: 157 ADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEKMFSINDS--GHISIVDLSALNTSTI-- 212
            D  PG+VI  +   D D GD   ++   P    F +  S   + S+V  +AL+   I  
Sbjct: 168 -DSPPGTVIALLNVHDRDSGDDGLVTCSIPDNLPFKLKKSYGNYYSLVTENALDRELIPY 226

Query: 213 -QLVVVATDTGNPPRQASVPAIMHF------PEAIVQQASS 246
             + V+ATD G+PP  A     +H       P A  Q A S
Sbjct: 227 YNVTVIATDRGSPPLSAHTYITLHVTDTNDNPPAFEQTAYS 267



 Score = 58.2 bits (139), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 75/279 (26%), Positives = 119/279 (42%), Gaps = 46/279 (16%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKP---RDLRVKYWLSNDYGERFSIS-------RQ 94
           F +  YS+   EN P    +  VT   P    + RV Y +S   G+   +S         
Sbjct: 261 FEQTAYSLYIPENNPRGASVFRVTARDPDSEENARVTYSISEKPGQEPPLSSYISVNSET 320

Query: 95  GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFL 151
           G +  ++  DYE     +  V A D     ++++ +V + V++ ND  P   YP     L
Sbjct: 321 GVLYALRSFDYEQFRELQLLVTAQDGGTPALSSNVSVTLLVLDKNDNAPEILYPS----L 376

Query: 152 P-----HIPLADLT--PGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIN-DSGHI- 199
           P      + LA  +  PG ++ KV A DGD G    LS   L+     +FS+   +G I 
Sbjct: 377 PTDGSTGVELAPRSAEPGYLVTKVVAVDGDSGQNAWLSYRLLKATEPGLFSVGLHTGEIR 436

Query: 200 ---SIVDLSALNTSTIQLVVVATDTGNPPRQA----------SVPAIMHFPEAIVQQASS 246
              + +D  AL  S   LVV   D G PP  A          S+P I+    ++   A  
Sbjct: 437 TTRNFLDKDALKQS---LVVAVRDNGEPPLSATVTVTVAVADSIPEILSDLSSLSTPADP 493

Query: 247 KLNSGTSSTVLIILGVVLIVLGFVIILLILYIHKNKHTK 285
           + +S T   V+ +  V  + L F+I+LL L + + +  +
Sbjct: 494 E-SSLTLYLVVAVATVSCLFLAFIIVLLALKLRRWRAAR 531


>gi|350417212|ref|XP_003491311.1| PREDICTED: fat-like cadherin-related tumor suppressor homolog,
            partial [Bombus impatiens]
          Length = 4739

 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 60/240 (25%), Positives = 114/240 (47%), Gaps = 31/240 (12%)

Query: 6    DFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLREL--------------QFSKNEYS 51
            DF   +  VV  + Y+ + +Y L             E+              +F+++ Y+
Sbjct: 2287 DFNTGVIYVVDELDYEQKKQYELTVRATDSVSGVYAEVLVSILVLDVNDCPPEFTQDSYN 2346

Query: 52   VSALENLPVNYVLLTVTT-NKPRDL--RVKYWLSND---YGERFSIS-RQGDISLMQCLD 104
            +S  E  P    +L V++ +   D+  +V+Y + ND     + F I   +G I L + LD
Sbjct: 2347 ISVSEAAPFGTSVLRVSSRDNDTDINQQVRYAIQNDTENSTDLFHIDPEEGVIFLKRSLD 2406

Query: 105  YETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTP 161
            +ET +S+ FTV A D     ++++A V ++V+++ND  P+F  P Y   L          
Sbjct: 2407 HETHESHHFTVIAIDRGVPSLSSTAHVWVTVIDMNDNPPKFEQPSYTCSLSE----HAER 2462

Query: 162  GSVIGKVEAADGDK-GDRVTLSLRGPYEKM-FSINDS-GHISIVDLSALNTSTIQLVVVA 218
            G  +  V A+D D   D++T ++ G  E+  ++I+ S G IS++++       + ++ V+
Sbjct: 2463 GQFVTVVSASDPDYVDDKLTYTIVGGNEQQTYNIDQSTGIISLINMQNFGEKKLSMLNVS 2522



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 55/222 (24%), Positives = 103/222 (46%), Gaps = 25/222 (11%)

Query: 45   FSKNEYSVSALENLPVNY-VLLTVTTNKPRDLRVKYWLSNDYGERFSISR-QGDISLMQC 102
            F  N  +V   E+  V + V L    +K  D      +  D  + F I R  G++ L + 
Sbjct: 1410 FKTNNQTVEVTESDEVGFLVALVQAADKDGDSLWYDIVDGDKRDEFFIGRDNGNVLLAKK 1469

Query: 103  LDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLAD-LTP 161
            LD+ET++ Y  T+  TD++ T    + ++V+++ND  P F    Y     H+ +++ +  
Sbjct: 1470 LDWETQNFYNLTIRVTDSVHTAETQLLVTVIDINDHRPEFTENIY-----HVDISENVEK 1524

Query: 162  GSVIGKVEAADGDKGDRVTLSLRGPYEK----MFSIND-SGHISIVDLSALNTSTIQ--- 213
            G  I ++ A D D+  +V  SL     +    +F ++  +G +++ ++  L+  TI+   
Sbjct: 1525 GEKILQLHATDEDEDKKVFYSLHAAQNQASLEIFHVDSVTGAVTLNEV--LDRETIEEHV 1582

Query: 214  LVVVATDTGNPPRQASVPAIM-------HFPEAIVQQASSKL 248
            L V+  D G P ++     I+       H PE I +    K+
Sbjct: 1583 LTVMVKDQGTPAKRNYARVIITVHDHNDHAPEFISEIIQGKV 1624



 Score = 48.9 bits (115), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 36/125 (28%), Positives = 64/125 (51%), Gaps = 12/125 (9%)

Query: 59   PVNYVLLTVTTN---KPRDLRVKYWLSNDYGERFSISRQ-GDISLMQCLDYETEDSYRFT 114
            P  YVL  + T+   +P + +++++L+ D  ++FS+ ++ G +  +  LD ET+  Y  T
Sbjct: 3083 PGTYVLTVLATDYDDEP-NAKLRFYLTGDNNDKFSLDKETGVLKTVGQLDRETQAKYSLT 3141

Query: 115  VYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAA 171
             +  D        S+ + I V ++ND  P+F    Y   LP     D+  G+++ KV A 
Sbjct: 3142 AHVQDRDKPSWECSSQLEILVSDLNDNAPKFTMQTYSATLPE----DVEVGTLVTKVHAT 3197

Query: 172  DGDKG 176
            D D G
Sbjct: 3198 DNDIG 3202



 Score = 48.5 bits (114), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 52/194 (26%), Positives = 83/194 (42%), Gaps = 24/194 (12%)

Query: 44   QFSKNEYSVSALENLPVNYVLLTVTTNKPRDL----RVKYWLSNDYGERFSI----SRQG 95
            +F  N Y +S  EN+     +L +  +   DL     V+Y   +D GE  ++    +  G
Sbjct: 2859 KFESNPYGISLAENIEEGTSILKIIAHD-EDLGSNGEVRYSFGSDIGELANVFTVDTYTG 2917

Query: 96   DISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLP 152
             IS +  LD E +  Y+F V ATD          +V++ + + ND  P F   +YE  + 
Sbjct: 2918 WISTLVLLDKEKQPEYKFQVVATDNGNPKHFARTSVHVKLKDYNDNPPAFVDDRYEAAVN 2977

Query: 153  HIPLADLTPGSVIGKVEAADGDKGDRVTLSL---RGPYEKMFSINDSGHISIVDLSALNT 209
                 D  PG+V+ K+   D D      +      G     F I  +G + +    AL+ 
Sbjct: 2978 E----DALPGTVVVKLITMDKDSDVNTPIEFYITSGDSRSQFQIRSTGEVYVA--KALDR 3031

Query: 210  STI---QLVVVATD 220
             TI   +L +V TD
Sbjct: 3032 ETIDRYELEIVGTD 3045



 Score = 47.8 bits (112), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 42/137 (30%), Positives = 73/137 (53%), Gaps = 13/137 (9%)

Query: 45   FSKNEYSVSALENLPVNYVL-LTVTTNKPRDLRVKYWLS--NDYGERFSIS-RQGDISLM 100
            F K  Y+ S LE++ ++  L L++    P + ++ Y ++  ND+ E F++    G I ++
Sbjct: 2238 FDKQFYTDSVLESIEIHSPLSLSIQAESPLNRKLIYSITKGNDF-EEFALDFNTGVIYVV 2296

Query: 101  QCLDYETEDSYRFTVYATDTLMTTSATVNIS--VVNVNDWDPRFRYPQYELFLPHIPLAD 158
              LDYE +  Y  TV ATD++    A V +S  V++VND  P F    Y     +I +++
Sbjct: 2297 DELDYEQKKQYELTVRATDSVSGVYAEVLVSILVLDVNDCPPEFTQDSY-----NISVSE 2351

Query: 159  LTP-GSVIGKVEAADGD 174
              P G+ + +V + D D
Sbjct: 2352 AAPFGTSVLRVSSRDND 2368



 Score = 47.8 bits (112), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 52/185 (28%), Positives = 80/185 (43%), Gaps = 14/185 (7%)

Query: 8   LQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVN--YVLL 65
           +Q   L +RA       RY+   + V  A  +     FS+  Y V   E  P+N   + L
Sbjct: 365 VQGYNLTLRATDRGVPQRYSYKFVPVHLADLNDNAPVFSREIYEVKVPETAPINTPVIRL 424

Query: 66  TVT---TNKPRDLRVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATD--- 119
            VT     K   + ++    N+ GE +  +  G +     LD E +  Y  TV A D   
Sbjct: 425 KVTDADEGKNALVFLEIVGGNEGGEFYVNAETGMLYTAVNLDAEKKAFYTLTVSAVDQGN 484

Query: 120 --TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGD 177
             T   +SA V I+VV+ ND DP F   + E+++     A    G+ + K+ A D D G+
Sbjct: 485 AGTRKQSSAKVKINVVDTNDNDPTFEQSEMEVWIDENEPA----GTSVVKITAKDRDSGE 540

Query: 178 RVTLS 182
              +S
Sbjct: 541 NAYIS 545



 Score = 47.0 bits (110), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 66/245 (26%), Positives = 113/245 (46%), Gaps = 30/245 (12%)

Query: 13   LVVRAIQYDNQDRYALATLIVSKAGTSLREL------------QFSKNEYSVSALENLPV 60
            L+ + + ++ Q+ Y L   +     T+  +L            +F++N Y V   EN+  
Sbjct: 1465 LLAKKLDWETQNFYNLTIRVTDSVHTAETQLLVTVIDINDHRPEFTENIYHVDISENVEK 1524

Query: 61   NYVLLTV-TTNKPRDLRVKYWLSNDYG----ERFSI-SRQGDISLMQCLDYETEDSYRFT 114
               +L +  T++  D +V Y L         E F + S  G ++L + LD ET + +  T
Sbjct: 1525 GEKILQLHATDEDEDKKVFYSLHAAQNQASLEIFHVDSVTGAVTLNEVLDRETIEEHVLT 1584

Query: 115  VYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTP-GSVIGKVEAADG 173
            V   D    T A  N + V +   D     P++   +    + + +P G+ + +V A D 
Sbjct: 1585 VMVKD--QGTPAKRNYARVIITVHDHNDHAPEFISEIIQGKVYETSPIGAAVVQVYAIDR 1642

Query: 174  DKGD--RVTLSL-RGPYEKMFSIN-DSGHISI---VDLSALNTSTIQLVVVATDTGNPPR 226
            D+GD  ++T S+  G    MF+I+ D G I +   +DLS   +S   L+V ATD G+P  
Sbjct: 1643 DRGDNAKITYSITSGNVGNMFAIDPDLGVIRVARELDLSV--SSEYILLVKATDHGSPAL 1700

Query: 227  QASVP 231
              +VP
Sbjct: 1701 SNTVP 1705



 Score = 45.8 bits (107), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 46/149 (30%), Positives = 74/149 (49%), Gaps = 17/149 (11%)

Query: 87   ERFSI-SRQGDISLMQCLDYETEDSYRFTVYATDTL---MTTSATVNISVVNVNDWDPRF 142
            ++F I +R G I++ + LD+E    Y  T+ A D     ++  ATVNI+V++ ND  P F
Sbjct: 3322 KKFQIDARSGVITIAEQLDFERARDYFLTIQAIDGGIPPLSNHATVNITVIDSNDNAPIF 3381

Query: 143  RYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSL---RGPYEKMFSIND-SGH 198
                Y   +      D   G  + +V A D D  +   +S    RG  +K FSI++ +G 
Sbjct: 3382 SEVSYRASI----REDAKIGEKVTQVFANDLDSEENGNVSYYIERGDRQKQFSIDEKTGQ 3437

Query: 199  ISIVDLSALNTSTIQ---LVVVATDTGNP 224
            I++   ++L+   I    L V A D+G P
Sbjct: 3438 ITVA--ASLDREEIGNYVLEVHARDSGIP 3464



 Score = 45.1 bits (105), Expect = 0.064,   Method: Compositional matrix adjust.
 Identities = 31/107 (28%), Positives = 49/107 (45%), Gaps = 7/107 (6%)

Query: 45   FSKNEYSVSALEN-LPVNYVLLTVTTNKPRDLRVK---YWLSNDYGERFSISRQGDISLM 100
            F  + Y  +  E+ LP   V+  +T +K  D+      Y  S D   +F I   G++ + 
Sbjct: 2967 FVDDRYEAAVNEDALPGTVVVKLITMDKDSDVNTPIEFYITSGDSRSQFQIRSTGEVYVA 3026

Query: 101  QCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDP---RFRY 144
            + LD ET D Y   +  TD        V + +++VND  P   R+RY
Sbjct: 3027 KALDRETIDRYELEIVGTDGKYVFKTRVTVQILDVNDNPPYCLRYRY 3073



 Score = 43.1 bits (100), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 45/150 (30%), Positives = 72/150 (48%), Gaps = 14/150 (9%)

Query: 89   FSISRQGDISLMQCLDYETEDSYRFTVYA-TDTL--MTTSATVNISVVNVNDWDPRFRYP 145
            F I   G I+L++ LD E +D++   V A TD+   +T  A +++ V++ ND  P+F   
Sbjct: 2804 FMIDANGQITLVKPLDRELKDNHLIGVLAETDSSPPLTALAEISLQVLDENDHAPKFESN 2863

Query: 146  QYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR-----GPYEKMFSIND-SGHI 199
             Y + L      ++  G+ I K+ A D D G    +        G    +F+++  +G I
Sbjct: 2864 PYGISLAE----NIEEGTSILKIIAHDEDLGSNGEVRYSFGSDIGELANVFTVDTYTGWI 2919

Query: 200  S-IVDLSALNTSTIQLVVVATDTGNPPRQA 228
            S +V L        +  VVATD GNP   A
Sbjct: 2920 STLVLLDKEKQPEYKFQVVATDNGNPKHFA 2949



 Score = 41.6 bits (96), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 53/187 (28%), Positives = 81/187 (43%), Gaps = 17/187 (9%)

Query: 51   SVSALENLPVNYVLLTVTTNKPR----DLRVKYWLSNDYG-ERFSISRQGDISLMQCLDY 105
            S S  EN P+  ++ TV          D R+ Y +    G   FSI  +G+I     LD 
Sbjct: 1100 SASVFENQPIGTLVTTVRAKDADPLGGDSRIGYTIRGGDGIGIFSIDNEGNIKTKVMLDV 1159

Query: 106  ETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPG 162
            E++  Y  TVYA D     +++S  V + V++ ND  P    P   ++ P + L +   G
Sbjct: 1160 ESKRGYWLTVYAQDHGVVPLSSSLQVYVEVLDRNDNTPLTEVP---VYYPSV-LENSPAG 1215

Query: 163  SVIGKVEAADGD-KGDRVTLSL-RGPYEKMFSINDSGHI---SIVDLSALNTSTIQLVVV 217
              + +++A D D    + T S+  G  E  F IN +  +   S   L   N +   L V 
Sbjct: 1216 VSVLQIQAFDRDVSPQQFTFSITSGNPEGYFLINSTTGLITTSGRKLDRENQAEHVLEVT 1275

Query: 218  ATDTGNP 224
              D G P
Sbjct: 1276 VRDDGRP 1282


>gi|332234718|ref|XP_003266552.1| PREDICTED: protocadherin beta-3 [Nomascus leucogenys]
          Length = 796

 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 47/151 (31%), Positives = 71/151 (47%), Gaps = 12/151 (7%)

Query: 95  GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFL 151
           G +  ++ LDYE   ++ F V ATD     +++ A V + V++ ND  P   YP      
Sbjct: 511 GHLFALRSLDYEALQAFEFRVGATDRGSPALSSEALVRVRVLDANDNSPFVLYPLQNGSA 570

Query: 152 PHIPLADLT--PGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSI-NDSGHISIVD-L 204
           P   L      PG ++ KV A DGD G    LS   L+     +F +   +G +     L
Sbjct: 571 PCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKATEPGLFGVWAHNGEVRTARLL 630

Query: 205 SALNTSTIQLVVVATDTGNPPRQASVPAIMH 235
           S  + +  +LVV+  D G PPR A+  A +H
Sbjct: 631 SERDVAKHRLVVLVKDNGEPPRSAT--ATLH 659



 Score = 46.2 bits (108), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 53/200 (26%), Positives = 91/200 (45%), Gaps = 30/200 (15%)

Query: 44  QFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGERFSISRQ--------- 94
           +F++  Y  + LEN PVN V++TV+ +   DL    + +  Y   F  S +         
Sbjct: 241 EFAQPLYEAAVLENTPVNSVIVTVSAS---DLDTGSFGTISYA-FFHASEEIRKTFQLNP 296

Query: 95  --GDISLMQCLDYETEDSYRFTVYATD-TLMTTSATVNISVVNVNDWDPRFRYPQYELFL 151
             GD+ L++ L++E  +SY   + A D   ++  +TV + VV+VND  P       EL L
Sbjct: 297 ITGDMQLVKYLNFEAINSYEVDIEAKDGGGLSGKSTVIVQVVDVNDNPP-------ELTL 349

Query: 152 PHI--PLADLTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSINDSGHISIVDLSAL 207
             +  P+ + +  +V+     +D D GD  RV  S+      +   +     ++V   AL
Sbjct: 350 SSVNSPIPENSGETVLAVFSVSDLDSGDNGRVMCSIENNLPFVLKPSVENFYTLVSEGAL 409

Query: 208 NTST---IQLVVVATDTGNP 224
           +  T     + +  TD G P
Sbjct: 410 DRETRSEYNITITVTDLGTP 429



 Score = 46.2 bits (108), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 46/138 (33%), Positives = 62/138 (44%), Gaps = 21/138 (15%)

Query: 102 CLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLAD 158
            LD ET   Y  T+  TD     + T   + + V +VND  P F    Y LF+      +
Sbjct: 408 ALDRETRSEYNITITVTDLGTPRLKTEYNITVLVSDVNDNAPAFTQTSYTLFVRE----N 463

Query: 159 LTPGSVIGKVEAADGDKGD--RVTLSLRGPYE------KMFSIN-DSGH---ISIVDLSA 206
            +P   IG V A D D G   +VT SL  P +       + SIN D+GH   +  +D  A
Sbjct: 464 NSPALHIGSVRATDRDSGTNAQVTYSLLPPQDPHLPLASLVSINADNGHLFALRSLDYEA 523

Query: 207 LNTSTIQLVVVATDTGNP 224
           L     +  V ATD G+P
Sbjct: 524 LQ--AFEFRVGATDRGSP 539


>gi|190339880|gb|AAI63753.1| Protocadherin 1 gamma 32 [Danio rerio]
          Length = 961

 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 67/262 (25%), Positives = 117/262 (44%), Gaps = 35/262 (13%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKP---RDLRVKYWLSNDYGERFSIS-------RQ 94
           FS+  YSV   EN   N  LL+V+ + P    +  + + +        S+S         
Sbjct: 472 FSQPSYSVDIAENNAPNAPLLSVSASDPDVGENSTISFSILESEALGLSVSSYVYINPNS 531

Query: 95  GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQ----- 146
           G I  ++  DYE  ++++F V   D      +++ATV++ + + ND  P   YP      
Sbjct: 532 GQIYAIRKFDYEHLNAFQFVVQVQDRGTPSQSSNATVHVFIKDQNDHPPILIYPAPTSDG 591

Query: 147 -YELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTL--SLRGPYEKMFSIN-DSGHISIV 202
               F+P       + G ++ ++   DGD G    L  S+ GP  +MF I+  +G +   
Sbjct: 592 TLHFFIPRT----ASIGHLVNRITFVDGDSGHNAWLFYSILGPDAEMFHIDAHTGELRTA 647

Query: 203 D-LSALNTSTI-QLVVVATDTGNPPRQASVPAIMHFPEAIVQQAS------SKLNSGTSS 254
             LS  ++ ++  L V+  D G P R ASV   +   E     +S      SK  +G++ 
Sbjct: 648 QKLSEEDSKSVFSLNVIVKDNGRPSRSASVAVNITLAEKSSDVSSERRSLTSKTPTGSNL 707

Query: 255 TVLIILGVVLIV-LGFVIILLI 275
           T+ +I+ +  I+   F+ I+ I
Sbjct: 708 TLYLIITLSFIIAFSFLAIIAI 729



 Score = 47.4 bits (111), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 43/154 (27%), Positives = 70/154 (45%), Gaps = 23/154 (14%)

Query: 89  FSI-SRQGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRY 144
           FS+ S  G+I +   +D+E    +  TV A D     M  S  + I +++VND  P    
Sbjct: 310 FSVDSVTGEIRVTGLIDHELAKVHDVTVLARDKGMPPMEGSCNIKIEIIDVNDNTPEISI 369

Query: 145 PQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR----------GPYEKMFSIN 194
                 +      D+T G+VI  ++  D D G    ++L            PY+ +F++ 
Sbjct: 370 NMVSSVISE----DVTLGTVIALIKVKDEDTGKNGEVNLHIPYGLPFKISSPYKGLFTLM 425

Query: 195 DSGHISIVDLSALNTSTIQLVVVATDTGNPPRQA 228
             G   ++D  A+   TI   V ATD+G+PPR +
Sbjct: 426 ADG---LLDREAVAEYTI--TVTATDSGSPPRSS 454


>gi|338729309|ref|XP_003365866.1| PREDICTED: protocadherin-11 X-linked-like isoform 2 [Equus
           caballus]
          Length = 1026

 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 79/280 (28%), Positives = 118/280 (42%), Gaps = 65/280 (23%)

Query: 45  FSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGER-------------FSI 91
           F+ NEY+    ENLP +  +  +T   P           DYGE              F+I
Sbjct: 570 FTHNEYNFYVPENLPRHGTVGLITVTDP-----------DYGENSAVTLSILDVNDDFTI 618

Query: 92  SRQ-GDISLMQCLDYETEDSYRFTVYATD---TLMTTSATVNISVVNVNDWDPRFRYP-- 145
             Q G I      D E ++SY F V A D      +++A V I+VV+VND  P F  P  
Sbjct: 619 DPQTGVIQPNISFDREKQESYTFYVKAEDGGRVSRSSTAKVTINVVDVNDNKPVFVVPSS 678

Query: 146 --QYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLS---LRGPYEKMFSIND-SGHI 199
              YEL LP        PG+V+  V A D D G    L    + G  + +F I+  +G+I
Sbjct: 679 NYSYELVLPST-----NPGTVVFTVVAVDNDTGMNAELRYSIVGGNTKGLFIIDQTTGNI 733

Query: 200 SIVDLSALNTSTI-QLVVVATDTGNPPRQASVPAIMHFPEAIVQQA-------------- 244
           ++ +   ++   + +LVV A D G P    S   +  F    V  A              
Sbjct: 734 TLKEKCVVSDLGLHRLVVKAKDLGQPDSLFSAVIVNLFVNESVTNATLIHELVRKNIETP 793

Query: 245 ------SSKLNSGTSSTVLIILGVVLIVLGFVIILLILYI 278
                 ++  +S TS  V I+   V IV G + ++L+++I
Sbjct: 794 VTQNIETADASSPTSDYVKIM---VAIVAGTITVILVIFI 830



 Score = 55.1 bits (131), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 37/117 (31%), Positives = 63/117 (53%), Gaps = 10/117 (8%)

Query: 73  RDLRVKYWLSNDYGERFSISRQ-GDISLMQCLDYETEDSYRFTVYATDT---LMTTSATV 128
           R+  + Y L  D    F++ R+ G ++ ++ LD E ++ Y FTV A D     +TT+ATV
Sbjct: 497 RNAEISYLLGIDAPSEFNLDRRTGILTAVKKLDREKQEKYSFTVLAKDNGIPPLTTNATV 556

Query: 129 NISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDR--VTLSL 183
            ++V++ ND  P F + +Y  ++P     +L     +G +   D D G+   VTLS+
Sbjct: 557 LVTVLDQNDNSPIFTHNEYNFYVPE----NLPRHGTVGLITVTDPDYGENSAVTLSI 609



 Score = 40.4 bits (93), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 47/184 (25%), Positives = 75/184 (40%), Gaps = 20/184 (10%)

Query: 56  ENLPVN-YVLLTVTTNKPRDLRVKYWLSNDYGERFSI----SRQGDISLMQCLDYETEDS 110
           EN P+N  + L   T+K  D   +     D+   F +    S Q  +     LDYE+   
Sbjct: 372 ENAPLNTKIALITVTDKDADHNGRVTCFTDHEVPFRLRPVFSNQFLLETAAYLDYESTRE 431

Query: 111 YRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGK 167
           Y   + A D     +  S+ + + V + ND  P F  P   L +P     + +PG+ + K
Sbjct: 432 YAIKLLAADAGKPPLNQSSMLLVKVKDENDNAPVFTQPFISLSVPE----NNSPGTQLTK 487

Query: 168 VEAADGDKGDRVTLS----LRGPYEKMFSINDSGHI--SIVDLSALNTSTIQLVVVATDT 221
           + A D D G    +S    +  P E  F+++    I  ++  L           V+A D 
Sbjct: 488 ISATDADSGRNAEISYLLGIDAPSE--FNLDRRTGILTAVKKLDREKQEKYSFTVLAKDN 545

Query: 222 GNPP 225
           G PP
Sbjct: 546 GIPP 549



 Score = 38.5 bits (88), Expect = 6.3,   Method: Compositional matrix adjust.
 Identities = 60/230 (26%), Positives = 99/230 (43%), Gaps = 34/230 (14%)

Query: 25  RYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYV---LLTVTTNKPRDLRVKYWL 81
           R + A L VS A T+     F +NE  VS  EN PV      L     +   + +++++ 
Sbjct: 229 RSSTAILQVSVADTNDNRPVFKENEIEVSIPENAPVGTSVTQLHATDADIGENAKIQFYF 288

Query: 82  SN---DYGER-FSI-SRQGDISLMQCLDYETEDSYRFTVYATD-TLMTTSATVNISVVNV 135
           SN   +  +R F + +  G I++ + LD E   +++  V A+D  LM   A V ++V ++
Sbjct: 289 SNLVSNIAKRLFHLNTTTGLITIKEPLDREESPNHKLLVLASDGGLMPARAMVLVNVTDI 348

Query: 136 NDWDPR--FRYPQYELFLP---HIPLADLTPGS---VIGKVEAADGDKGDRVT------- 180
           ND  P    RY    +  P    + L++  P +    +  V   D D   RVT       
Sbjct: 349 NDNVPSIDIRY----IINPINGTVVLSENAPLNTKIALITVTDKDADHNGRVTCFTDHEV 404

Query: 181 -LSLRGPYEKMFSINDSGHISIVDLSALNTSTIQLVVVATDTGNPPRQAS 229
              LR  +   F +  + ++   D  +     I+L  +A D G PP   S
Sbjct: 405 PFRLRPVFSNQFLLETAAYL---DYESTREYAIKL--LAADAGKPPLNQS 449


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.316    0.133    0.377 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,929,821,075
Number of Sequences: 23463169
Number of extensions: 245949623
Number of successful extensions: 752088
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 437
Number of HSP's successfully gapped in prelim test: 6018
Number of HSP's that attempted gapping in prelim test: 708135
Number of HSP's gapped (non-prelim): 32470
length of query: 383
length of database: 8,064,228,071
effective HSP length: 144
effective length of query: 239
effective length of database: 8,980,499,031
effective search space: 2146339268409
effective search space used: 2146339268409
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 78 (34.7 bits)