Query psy4697
Match_columns 383
No_of_seqs 305 out of 2376
Neff 7.9
Searched_HMMs 29240
Date Fri Aug 16 23:32:41 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy4697.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/4697hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2a62_A Cadherin-8; extracellul 100.0 2.8E-42 9.6E-47 333.5 20.9 229 3-236 63-321 (322)
2 1q55_A EP-cadherin, C-cadherin 100.0 1.6E-42 5.4E-47 374.6 20.5 233 3-242 334-590 (880)
3 3q2v_A Cadherin-1; cell adhesi 100.0 6.3E-41 2.1E-45 346.2 30.5 240 3-249 179-443 (550)
4 3ubh_A Neural-cadherin; cell a 100.0 1.4E-40 4.6E-45 332.9 29.6 227 3-237 174-417 (419)
5 3ubf_A Neural-cadherin; cell a 100.0 2.7E-40 9.1E-45 319.0 28.6 233 3-243 58-315 (316)
6 1l3w_A EP-cadherin, C-cadherin 100.0 4.4E-41 1.5E-45 347.0 20.5 240 3-249 185-448 (546)
7 3q2w_A Cadherin-2; cell adhesi 100.0 1.3E-39 4.5E-44 336.9 30.1 240 3-249 178-448 (559)
8 3q2w_A Cadherin-2; cell adhesi 100.0 1.4E-39 4.8E-44 336.7 28.0 240 3-249 66-340 (559)
9 1l3w_A EP-cadherin, C-cadherin 100.0 8.8E-40 3E-44 337.2 25.1 240 3-249 72-340 (546)
10 3q2v_A Cadherin-1; cell adhesi 100.0 4.6E-39 1.6E-43 332.2 30.1 244 3-253 66-338 (550)
11 1q55_A EP-cadherin, C-cadherin 100.0 2E-38 6.8E-43 342.6 25.1 240 3-249 221-489 (880)
12 3ubh_A Neural-cadherin; cell a 100.0 2.3E-37 7.8E-42 309.5 29.5 240 3-250 63-327 (419)
13 3mvs_A Cadherin-23, otocadheri 100.0 2.3E-37 7.8E-42 281.6 22.4 198 40-243 3-209 (210)
14 2x2u_A Proto-oncogene tyrosine 100.0 3.2E-36 1.1E-40 280.5 12.5 200 44-248 2-245 (246)
15 2a4e_A Cadherin-11; dimer, cal 100.0 2.7E-33 9.2E-38 255.6 24.1 190 49-245 5-214 (215)
16 3qrb_A Cadherin-1; cell adhesi 100.0 1.5E-32 5.2E-37 250.2 22.0 183 50-237 5-212 (213)
17 3k5r_A Cadherin 13; mouse, str 100.0 1.9E-32 6.5E-37 250.5 22.1 182 51-237 7-217 (218)
18 2qvi_A Cadherin-2; beta barrel 100.0 4.8E-32 1.6E-36 247.3 21.7 182 51-237 6-214 (215)
19 3ppe_A Vascular endothelial ca 100.0 1.6E-31 5.3E-36 241.8 23.7 182 50-237 5-202 (203)
20 3lnd_A CDH6 protein, cadherin 100.0 6E-32 2.1E-36 245.2 15.9 181 51-237 6-206 (207)
21 2a62_A Cadherin-8; extracellul 100.0 1.5E-30 5.2E-35 251.3 15.7 195 50-251 5-219 (322)
22 2a4e_A Cadherin-11; dimer, cal 100.0 5.2E-29 1.8E-33 227.1 19.5 138 3-141 64-215 (215)
23 4apx_B Protocadherin-15, otoca 100.0 1.3E-27 4.4E-32 221.5 20.0 186 48-237 20-236 (242)
24 2x2u_A Proto-oncogene tyrosine 100.0 1.5E-29 5E-34 235.5 4.8 141 3-143 73-245 (246)
25 3ubf_A Neural-cadherin; cell a 100.0 1.8E-27 6.3E-32 229.2 19.4 198 48-255 7-222 (316)
26 3mvs_A Cadherin-23, otocadheri 99.9 1.2E-26 4.1E-31 210.8 19.2 133 3-139 70-210 (210)
27 3ppe_A Vascular endothelial ca 99.9 6.2E-26 2.1E-30 205.0 17.7 131 3-134 61-203 (203)
28 3qrb_A Cadherin-1; cell adhesi 99.9 7.5E-26 2.6E-30 205.9 17.3 132 3-134 66-213 (213)
29 3k5r_A Cadherin 13; mouse, str 99.9 8.3E-26 2.8E-30 206.4 16.9 132 3-134 66-218 (218)
30 2qvi_A Cadherin-2; beta barrel 99.9 9.1E-26 3.1E-30 205.7 16.5 132 3-134 66-215 (215)
31 2yst_A Protocadherin-7; BH-PCD 99.9 1.1E-26 3.8E-31 192.2 9.1 108 33-140 2-119 (119)
32 3lnd_A CDH6 protein, cadherin 99.9 3.5E-25 1.2E-29 200.6 12.7 131 3-134 63-207 (207)
33 2ee0_A Protocadherin-9; Ca dom 99.9 1.8E-24 6.2E-29 177.6 8.6 104 33-136 2-114 (114)
34 4apx_B Protocadherin-15, otoca 99.9 7.1E-22 2.4E-26 183.0 16.2 132 3-134 83-237 (242)
35 2yst_A Protocadherin-7; BH-PCD 99.8 3.2E-21 1.1E-25 159.3 7.9 111 130-245 2-119 (119)
36 2yqg_A Desmoglein-2, HDGC; cad 99.8 3.3E-21 1.1E-25 160.1 6.4 107 38-145 5-123 (123)
37 2ee0_A Protocadherin-9; Ca dom 99.8 7.7E-20 2.6E-24 149.8 7.7 102 130-237 2-111 (114)
38 1ncg_A N-cadherin; cell adhesi 99.8 2.2E-19 7.5E-24 146.2 9.2 93 49-142 6-110 (110)
39 1wyj_A Protocadherin beta 14; 99.8 3.4E-20 1.2E-24 154.4 2.2 103 47-150 10-123 (125)
40 3k6d_A T-cadherin; cell adhesi 99.7 2.4E-16 8.4E-21 125.6 10.6 84 50-134 5-99 (99)
41 3k6f_A T-cadherin; cell adhesi 99.7 6.9E-16 2.3E-20 123.2 11.7 83 51-134 7-100 (100)
42 3k6i_A T-cadherin; cell adhesi 99.7 8.6E-16 2.9E-20 122.5 11.7 83 51-134 6-99 (99)
43 2omz_B Epithelial-cadherin; le 99.6 1.2E-15 4E-20 123.0 8.9 85 51-135 10-105 (105)
44 1zvn_A Mn-cadherin; strand dim 99.6 2.5E-15 8.5E-20 119.7 10.0 84 50-134 6-99 (99)
45 1zxk_A Cadherin-8; strand dime 99.6 4.1E-15 1.4E-19 118.2 9.5 84 50-134 5-98 (98)
46 2yqg_A Desmoglein-2, HDGC; cad 99.6 2.2E-15 7.6E-20 124.8 5.3 108 135-248 5-121 (123)
47 1wuz_A Pcdha4 protein, CNR-EC1 99.5 8.6E-15 2.9E-19 117.5 3.6 88 48-138 3-103 (103)
48 3k6d_A T-cadherin; cell adhesi 99.4 8.4E-13 2.9E-17 105.0 10.4 84 148-237 6-98 (99)
49 1ncg_A N-cadherin; cell adhesi 99.4 6.1E-13 2.1E-17 107.9 9.7 94 146-247 6-110 (110)
50 3k6f_A T-cadherin; cell adhesi 99.4 1.8E-12 6.2E-17 103.2 11.0 84 148-237 7-99 (100)
51 3k6i_A T-cadherin; cell adhesi 99.4 3.1E-12 1.1E-16 101.7 11.8 84 148-237 6-98 (99)
52 1zvn_A Mn-cadherin; strand dim 99.4 2.2E-12 7.5E-17 102.6 10.3 86 147-237 6-98 (99)
53 1zxk_A Cadherin-8; strand dime 99.4 2.8E-12 9.7E-17 101.7 10.5 86 147-237 5-97 (98)
54 2omz_B Epithelial-cadherin; le 99.3 1.5E-11 5E-16 98.8 8.7 86 148-238 10-104 (105)
55 1wyj_A Protocadherin beta 14; 99.1 4.4E-11 1.5E-15 99.1 4.9 100 145-253 11-121 (125)
56 1wuz_A Pcdha4 protein, CNR-EC1 98.4 8.2E-08 2.8E-12 76.5 1.9 87 146-243 4-103 (103)
57 1op4_A Neural-cadherin; beta s 95.5 0.047 1.6E-06 46.2 8.1 80 39-121 30-110 (159)
58 2yhg_A SDE_182CT, cellulose-bi 95.1 0.22 7.5E-06 48.9 12.7 74 161-236 353-436 (437)
59 1op4_A Neural-cadherin; beta s 94.5 0.18 6E-06 42.7 8.8 80 137-223 31-111 (159)
60 3pdd_A Glycoside hydrolase, fa 93.1 3.7 0.00013 35.4 15.2 113 8-134 60-180 (190)
61 3rb5_A Na/Ca exchange protein; 91.3 8.4 0.00029 35.7 16.2 135 39-184 6-162 (298)
62 2klu_A T-cell surface glycopro 91.1 0.16 5.5E-06 35.9 3.1 33 252-285 7-40 (70)
63 2ks1_B Epidermal growth factor 91.1 0.17 5.9E-06 33.1 3.0 8 260-267 18-25 (44)
64 2jwa_A Receptor tyrosine-prote 90.3 0.17 5.8E-06 33.0 2.4 8 275-282 32-39 (44)
65 2iep_A Muscle-specific kinase 85.0 14 0.00049 30.0 15.9 176 42-236 7-190 (192)
66 3pdd_A Glycoside hydrolase, fa 83.5 20 0.00069 30.6 20.0 115 107-239 59-181 (190)
67 2k9y_A Ephrin type-A receptor 82.8 0.98 3.4E-05 28.7 2.9 8 275-282 33-40 (41)
68 2yhg_A SDE_182CT, cellulose-bi 72.9 18 0.00061 35.4 9.9 62 70-132 365-436 (437)
69 2l8s_A Integrin alpha-1; trans 72.6 3 0.0001 28.3 3.0 24 257-280 11-34 (54)
70 2ks1_B Epidermal growth factor 72.2 2.7 9.2E-05 27.3 2.6 19 257-275 12-30 (44)
71 2knc_A Integrin alpha-IIB; tra 72.1 4.7 0.00016 27.4 3.9 24 257-280 14-37 (54)
72 3pe9_A Fibronectin(III)-like m 69.3 17 0.00058 27.7 7.2 63 61-134 17-88 (98)
73 2k1a_A Integrin alpha-IIB; sin 67.4 4.7 0.00016 25.9 2.9 24 257-280 12-35 (42)
74 3knb_A Titin; IG-like, titin, 66.7 36 0.0012 25.1 9.9 87 42-134 5-99 (100)
75 2jwa_A Receptor tyrosine-prote 65.1 3.5 0.00012 26.7 2.0 17 268-284 28-44 (44)
76 3knb_B Obscurin-like protein 1 64.5 42 0.0014 25.1 10.0 86 42-134 13-105 (107)
77 2l6w_A Beta-type platelet-deri 67.4 1.5 5.1E-05 27.5 0.0 6 262-267 13-18 (39)
78 3pe9_A Fibronectin(III)-like m 61.5 50 0.0017 25.0 8.9 69 163-238 18-88 (98)
79 2k1k_A Ephrin type-A receptor 61.0 7.3 0.00025 24.4 2.9 9 260-268 18-26 (38)
80 2yrl_A KIAA1837 protein; PKD d 60.6 15 0.00052 28.0 5.4 32 106-137 66-98 (102)
81 2l8s_A Integrin alpha-1; trans 55.5 7.1 0.00024 26.5 2.3 25 251-275 8-32 (54)
82 2jp3_A FXYD domain-containing 52.0 9.2 0.00031 27.0 2.5 12 260-271 24-35 (67)
83 3laf_A Deleted in colorectal c 50.8 1.5E+02 0.005 27.0 18.7 187 12-217 191-385 (403)
84 2jo1_A Phospholemman; FXYD1, N 49.9 14 0.00047 26.3 3.1 26 260-285 23-48 (72)
85 2yrl_A KIAA1837 protein; PKD d 48.8 33 0.0011 26.1 5.6 31 8-40 68-98 (102)
86 3ead_A Na/Ca exchange protein; 48.6 1E+02 0.0034 24.6 8.8 42 40-83 2-45 (137)
87 3rb5_A Na/Ca exchange protein; 48.3 95 0.0033 28.5 9.7 48 31-81 112-161 (298)
88 2kpn_A Bacillolysin; solution 47.9 50 0.0017 25.3 6.5 44 97-140 47-91 (103)
89 2qsq_A Carcinoembryonic antige 45.4 54 0.0018 25.0 6.5 47 187-235 62-108 (111)
90 2zxe_G FXYD10, phospholemman-l 44.3 11 0.00039 27.0 2.0 7 262-268 28-34 (74)
91 2knc_A Integrin alpha-IIB; tra 39.9 10 0.00034 25.8 1.1 25 251-275 11-35 (54)
92 2v5t_A NCAM2, N-CAM 2, neural 39.3 1.4E+02 0.0048 23.5 18.7 161 42-217 2-172 (189)
93 3lb6_C IL-13, interleukin-13 r 37.7 43 0.0015 31.6 5.7 13 108-120 207-219 (380)
94 4a2l_A BT_4663, two-component 37.6 2.2E+02 0.0074 29.3 11.6 68 166-236 709-780 (795)
95 3gin_A Sodium/calcium exchange 37.6 1.6E+02 0.0055 24.2 8.6 53 28-83 9-64 (160)
96 2y72_A Collagenase, collagenas 36.0 55 0.0019 23.7 4.9 30 104-133 54-84 (85)
97 3ead_A Na/Ca exchange protein; 34.0 29 0.001 27.9 3.3 10 28-37 69-78 (137)
98 3ott_A Two-component system se 27.9 2.3E+02 0.0079 28.9 9.8 57 178-237 690-747 (758)
99 2y72_A Collagenase, collagenas 27.6 87 0.003 22.6 4.7 52 176-236 31-83 (85)
100 1afo_A Glycophorin A; integral 26.4 33 0.0011 21.4 1.7 29 254-283 11-39 (40)
101 2c4x_A Endoglucanase, ctcel9D- 24.8 3.3E+02 0.011 24.3 8.9 60 171-238 35-95 (260)
102 2ptt_B Natural killer cell rec 23.3 1.5E+02 0.0051 23.1 5.4 45 188-236 65-110 (112)
103 4dkd_C Macrophage colony-stimu 22.8 2.9E+02 0.0099 23.5 8.3 173 42-235 4-180 (292)
104 3v9f_A Two-component system se 22.5 1.8E+02 0.0061 29.8 7.7 56 178-236 719-774 (781)
105 1cd1_A CD1, MCD1D.1; immunolog 21.8 19 0.00066 33.3 0.0 7 178-184 202-208 (315)
106 2yd1_A Tyrosine-protein phosph 21.1 3.3E+02 0.011 22.0 20.9 180 41-236 5-200 (212)
107 2o26_X MAST/stem cell growth f 20.1 4.1E+02 0.014 22.6 17.6 119 88-216 138-271 (290)
No 1
>2a62_A Cadherin-8; extracellular domain, homodimer, calcium binding, adhesion; 4.50A {Mus musculus}
Probab=100.00 E-value=2.8e-42 Score=333.47 Aligned_cols=229 Identities=21% Similarity=0.319 Sum_probs=207.2
Q ss_pred CCcCCCCeEEEEEEEEECCC-CCceEEEEEEEEEeeCCCCCCeeecCcEEEEEECCCCCCcEEEEEEeEeCCC------C
Q psy4697 3 NEDDFLQPITLVVRAIQYDN-QDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRD------L 75 (383)
Q Consensus 3 ~DrE~~~~y~l~V~a~D~g~-~~~~s~~~v~V~V~DvNdn~P~F~~~~y~~~V~En~~~gt~v~~v~A~D~D~------~ 75 (383)
.|||..+.|.|+|+|+|.+. +++++.++|.|.|.|+|||+|.|.+..|.++|+||.++|+.|+++.|+|+|. +
T Consensus 63 LDrE~~~~y~l~v~a~D~~~~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~~~gt~v~~v~A~D~D~~~~G~n~ 142 (322)
T 2a62_A 63 LDREEKAEYTLTAQAVDFETNKPLEPPSEFIIKVQDINDNAPEFLNGPYHATVPEMSILGTSVTNVTATDADDPVYGNSA 142 (322)
T ss_dssp CCTTTCSBCCEEEEEECTTTCSEEEEEEEECEECCCCSCSCBCCSSSEEEEEECSSCCTTCBCCCCCCCBCSCSSSTTSS
T ss_pred CCcccccEEEEEEEEEECCCCCcccceEEEEEEEEecCCCCCccCCCceEEEEeCCCCCCCEEEEEEEEeCCCCCCCccE
Confidence 48999999999999999875 4678889999999999999999999999999999999999999999999992 6
Q ss_pred eeEEEEecCCCCCEEEcC-cccEEEc-ccCCcccCcEEEEEEEEecCC-----ceeEEEEEEEEeecCCCCCcccCCcee
Q psy4697 76 RVKYWLSNDYGERFSISR-QGDISLM-QCLDYETEDSYRFTVYATDTL-----MTTSATVNISVVNVNDWDPRFRYPQYE 148 (383)
Q Consensus 76 ~v~Ysi~~~~~~~F~Id~-tG~I~~~-~~LD~E~~~~y~~~V~A~D~~-----~~s~~tV~I~V~DvNDn~P~f~~~~~~ 148 (383)
.++|+|.+.. .+|.|++ +|.|++. +.||||....|.|.|.|+|+| ++++++|+|+|.|+|||+|+|..+.|.
T Consensus 143 ~i~Y~i~~~~-~~F~Id~~tG~i~~~~~~LD~E~~~~y~l~V~a~D~g~p~~~~s~~~~v~I~V~DvNDn~P~F~~~~y~ 221 (322)
T 2a62_A 143 KLVYSILEGQ-PYFSIEPETAIIKTALPNMDREAKEEYLVVIQAKDMGGHSGGLSGTTTLTVTLTDVNDNPPKFAQSLYH 221 (322)
T ss_dssp CEEEEEEECT-TTEEECTTTCCEEECSSCCCGGGCSEEEEEEEEEESCSSSSCCBCCEEEEEEECCCCCCCCCCSCSEEE
T ss_pred EEEEEEccCC-CCEEEecCCCEEEecccCCCcccCCeEEEEEEEEECCCCCCCceeEEEEEEEEEecCCCCCeecCCCce
Confidence 8999998653 5899996 9999998 999999999999999999965 678999999999999999999999999
Q ss_pred EEEeccCCCCCCCCceEEEEEeeeCCCCC--eEEEEEe-CCCCCCEEEc----C-CCcEEEec-cCCCCcceEEEEEEEe
Q psy4697 149 LFLPHIPLADLTPGSVIGKVEAADGDKGD--RVTLSLR-GPYEKMFSIN----D-SGHISIVD-LSALNTSTIQLVVVAT 219 (383)
Q Consensus 149 ~~v~~~~~e~~~~g~~v~~v~A~D~D~g~--~i~ysi~-~~~~~~F~i~----~-tG~i~l~~-~~~~~~~~y~L~V~a~ 219 (383)
+.++ |+.++|+.|++|.|+|+|.|. .++|+|. ++..+.|.|+ . +|.|++.+ ++++....|.|.|.|+
T Consensus 222 ~~v~----En~~~gt~v~~v~A~D~D~g~n~~i~Y~i~~g~~~~~F~I~~d~~~~tG~i~~~~~LD~E~~~~y~l~V~A~ 297 (322)
T 2a62_A 222 FSVP----EDVVLGTAIGRVKANDQDIGENAQSSYDIIDGDGTALFEITSDAQAQDGVIRLRKPLDFETKKSYTLKVEAA 297 (322)
T ss_dssp EEEC----SCCSSCCEEEEEECCCSSCGGGTCCEEEEC---CCSSBCCBCCTTTSEEEEEBCSCCCCSSCCEEEEEEEEE
T ss_pred eEeE----CCCCCCcEEEEEEEEeCCCCCCceEEEEEECCCCCCcEEEeccCCCceEEEEECCcCCcccCCeEEEEEEEE
Confidence 9999 999999999999999999985 6999996 5667899998 3 79998866 4778889999999999
Q ss_pred eCCCCC-------ceeEEEEEEEE
Q psy4697 220 DTGNPP-------RQASVPAIMHF 236 (383)
Q Consensus 220 D~g~p~-------~sst~tv~I~v 236 (383)
|+|.|+ ++++++|+|.|
T Consensus 298 D~g~pp~~~~~~~~s~~~~V~I~V 321 (322)
T 2a62_A 298 NIHIDPRFSSRGPFKDTATVKIVV 321 (322)
T ss_dssp CCCSSCTTSSCCCCCCCCEEEEEE
T ss_pred ECCCCCccccCCCcccEEEEEEEE
Confidence 999886 46788898887
No 2
>1q55_A EP-cadherin, C-cadherin; trans interaction, desmosome, junction, adhesion, structural protein; HET: NAG NDG; 30.00A {Mus musculus} SCOP: i.20.1.1 PDB: 1q5a_A* 1q5b_A* 1q5c_A*
Probab=100.00 E-value=1.6e-42 Score=374.62 Aligned_cols=233 Identities=19% Similarity=0.276 Sum_probs=214.1
Q ss_pred CCcCCCCeEEEEEEEEECCCCCceEEEEEEEEEeeCCCCCCeeecCcEEEEEECCCCCCcEEEEEEeEeCC--C---Cee
Q psy4697 3 NEDDFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPR--D---LRV 77 (383)
Q Consensus 3 ~DrE~~~~y~l~V~a~D~g~~~~~s~~~v~V~V~DvNdn~P~F~~~~y~~~V~En~~~gt~v~~v~A~D~D--~---~~v 77 (383)
.|||..+.|.|+|+|+|.|.|+++++++|+|.|.|+|||+|+|.+..|.++|+|| ++|+.|++|.|+|+| . +.+
T Consensus 334 LDrE~~~~y~l~V~A~D~g~~~~s~~~~v~I~V~DvNDn~P~F~~~~y~~~V~En-~~gt~V~~v~A~D~D~~~g~n~~v 412 (880)
T 1q55_A 334 LDREKFPEYTLTVQATDLEGAGLSVEGKAIIQITDANDNAPIFDPKTYTALVPEN-EIGFEVQRLSVTDLDMPGTPAWQA 412 (880)
T ss_dssp CCTTTCCEEEEEEEEEHHHHTSCEEECCEEEEEECCCCCCCCBSCSEEEEEEESS-SCCCEEEEECBCCCSCTTSTTSCE
T ss_pred CCHHHcceeEEEEEEEECCCCCccceeEEEEEEEeccCCCCCccccceEEEeecC-CCCcEEEEEEEECCCCCCCCCceE
Confidence 4899999999999999999999999999999999999999999999999999999 999999999999999 2 789
Q ss_pred EEEEecCCCCCEEEc-----CcccEEEcccCCcccCcEEEEEEEEecCC------ceeEEEEEEEEeecCCCCCcccCCc
Q psy4697 78 KYWLSNDYGERFSIS-----RQGDISLMQCLDYETEDSYRFTVYATDTL------MTTSATVNISVVNVNDWDPRFRYPQ 146 (383)
Q Consensus 78 ~Ysi~~~~~~~F~Id-----~tG~I~~~~~LD~E~~~~y~~~V~A~D~~------~~s~~tV~I~V~DvNDn~P~f~~~~ 146 (383)
+|+|.++..++|.|+ .+|.|++.++||||....|.|+|.|+|++ ++++++|+|+|.|+|| +|+|..+.
T Consensus 413 ~Ysi~~~~~~~F~I~~d~~~~~G~i~~~~~LD~E~~~~y~l~V~A~D~~~~~~~~~sst~tV~I~V~DvND-~P~f~~~~ 491 (880)
T 1q55_A 413 VYKIRVNEGGFFNITTDPESNQGILTTAKGLDFELRKQYVLQITVENAEPFSVPLPTSTATVTVTVEDVNE-APFFVPAV 491 (880)
T ss_dssp ECCBSCCTTSCEEEEECTTTCCEEEEESSCCCCSSCCCEEEEECCEESSCCSSCCCCCCEEEEEEEECCCC-CCEESSCE
T ss_pred EEEEecCCCceEEEEecCCCceEEEecccCCCcccCCcEEEEEEEEECCCCCCCCcceeEEEEEEEEeCCC-CCEEecCc
Confidence 999988667799994 37999999999999999999999999964 6789999999999999 99999999
Q ss_pred eeEEEeccCCCCCCCCceEEEEEeeeCCCCC--eEEEEEeCCCCCCEEEcC-CCcEEEecc-CCCCc----ceEEEEEEE
Q psy4697 147 YELFLPHIPLADLTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSIND-SGHISIVDL-SALNT----STIQLVVVA 218 (383)
Q Consensus 147 ~~~~v~~~~~e~~~~g~~v~~v~A~D~D~g~--~i~ysi~~~~~~~F~i~~-tG~i~l~~~-~~~~~----~~y~L~V~a 218 (383)
|.+.|+ |+.++|+.|++|.|+|+|.|. .++|+|.++..++|.|++ +|.|++.+. +++.. ..|.|.|.|
T Consensus 492 y~~~V~----En~~~Gt~V~~v~A~D~D~g~n~~v~Ysi~~~~~~~F~Id~~tG~I~~~~~LDrE~~~~~~~~y~l~V~A 567 (880)
T 1q55_A 492 SRVDVS----EDLSRGEKIISLVAQDPDKQQIQKLSYFIGNDPARWLTVNKDNGIVTGNGNLDRESEYVKNNTYTVIMLV 567 (880)
T ss_dssp ECCCBC----TTCCSSEEEEECCEECCCTTCCCCEEEEECCCSSCCCEEETTTTEEEECSCCCTTSSSCCSSCCEEEEEE
T ss_pred eEEEEe----CCCCCCCEEEEEEEEeCCCCCCCcEEEEECCCCCCCEEEeCCccEEEECCccCcccccCCCCEEEEEEEE
Confidence 999999 999999999999999999874 799999877778999997 999998764 66655 799999999
Q ss_pred eeCCCCCceeEEEEEEEEeCCccc
Q psy4697 219 TDTGNPPRQASVPAIMHFPEAIVQ 242 (383)
Q Consensus 219 ~D~g~p~~sst~tv~I~v~~~~~~ 242 (383)
+|+|.|+++++++|.|.| .++|+
T Consensus 568 ~D~g~p~~sst~tv~I~V-~DvND 590 (880)
T 1q55_A 568 TDDGVSVGTGTGTLILHV-LDVND 590 (880)
T ss_dssp EECSSSCCCCCEEEECCB-CCCCC
T ss_pred EECCCCCcEeEEEEEEEE-EeCCC
Confidence 999999999999999999 44444
No 3
>3q2v_A Cadherin-1; cell adhesion, calcium binding; HET: MAN; 3.40A {Mus musculus}
Probab=100.00 E-value=6.3e-41 Score=346.19 Aligned_cols=240 Identities=21% Similarity=0.282 Sum_probs=222.9
Q ss_pred CCcCCCCeEEEEEEEEECCCCCceEEEEEEEEEeeCCCCCCeeecCcEEEEEECCCCCCcEEEEEEeEeCCC---C--ee
Q psy4697 3 NEDDFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRD---L--RV 77 (383)
Q Consensus 3 ~DrE~~~~y~l~V~a~D~g~~~~~s~~~v~V~V~DvNdn~P~F~~~~y~~~V~En~~~gt~v~~v~A~D~D~---~--~v 77 (383)
.|||..+.|.|+|+|+|.|.++++++++|+|.|.|+|||+|+|.+..|.++|+|| ++|+.|+++.|+|+|. + .+
T Consensus 179 LDrE~~~~y~l~V~A~D~g~~~~s~t~~v~I~V~DvNDn~P~F~~~~y~~~V~En-~~g~~v~~v~a~D~D~~~n~~~~~ 257 (550)
T 3q2v_A 179 LDRESYPTYTLVVQAADLQGEGLSTTAKAVITVKDINDNAPVFNPSTYQGQVPEN-EVNARIATLKVTDDDAPNTPAWKA 257 (550)
T ss_dssp CCTTTCSEEEEEEEEESGGGTSCCCEEEEEEEEECCSCSCCEESSSEEEEEEESS-CSSCCCEEECEECCSCTTSTTTCE
T ss_pred CCcccCcEEEEEEEEEcCCCCCeeEEEEEEEEecccCCCCCEEecceeEEEEecC-CCCCEEEEEEEEECCCCCCCcEEE
Confidence 4899999999999999999999999999999999999999999999999999999 9999999999999996 2 47
Q ss_pred EEEEecCCCCCEEEc----C-cccEEEcccCCcccCcEEEEEEEEecCC------ceeEEEEEEEEeecCCCCCcccCCc
Q psy4697 78 KYWLSNDYGERFSIS----R-QGDISLMQCLDYETEDSYRFTVYATDTL------MTTSATVNISVVNVNDWDPRFRYPQ 146 (383)
Q Consensus 78 ~Ysi~~~~~~~F~Id----~-tG~I~~~~~LD~E~~~~y~~~V~A~D~~------~~s~~tV~I~V~DvNDn~P~f~~~~ 146 (383)
+|+|.++..++|.|+ . +|.|++.++||||....|.|.|+|+|++ ++++++|.|+|+|+|| +|.|..+.
T Consensus 258 ~ysi~~~~~~~F~i~~d~~~~tG~i~~~~~LD~E~~~~y~l~V~a~D~~~~~~~~~~~~~~v~I~V~DvND-~P~f~~~~ 336 (550)
T 3q2v_A 258 VYTVVNDPDQQFVVVTDPTTNDGILKTAKGLDFEAKQQYILHVRVENEEPFEGSLVPSTATVTVDVVDVNE-APIFMPAE 336 (550)
T ss_dssp EEEESSCSSCCEEEEECTTTCCEEEEESSCCCTTTCSEEEEEEEEEESSCCCSSCCCEEEEEEEEEECCCC-CCEESSSS
T ss_pred EEEEEeCCCCcEEEEecCCCccEEEEecccCCccccceEEEEEEEEeCCCCCCCccceEEEEEEEEEecCC-CCeEcCcc
Confidence 799998778899996 4 9999999999999999999999999975 6889999999999999 99999999
Q ss_pred eeEEEeccCCCCCCCCceEEEEEeeeCCCCC--eEEEEEeCCCCCCEEEcC-CCcEEEecc-CCCCc-----ceEEEEEE
Q psy4697 147 YELFLPHIPLADLTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSIND-SGHISIVDL-SALNT-----STIQLVVV 217 (383)
Q Consensus 147 ~~~~v~~~~~e~~~~g~~v~~v~A~D~D~g~--~i~ysi~~~~~~~F~i~~-tG~i~l~~~-~~~~~-----~~y~L~V~ 217 (383)
|.+.++ |+.++|+.|+++.|+|+|.|. .++|+|.++..++|.|++ +|.|++.+. +++.. ..|.|+|.
T Consensus 337 ~~~~v~----E~~~~gt~v~~v~A~D~D~g~n~~i~y~i~~~~~~~f~id~~tG~i~~~~~lDrE~~~~~~~~~y~l~V~ 412 (550)
T 3q2v_A 337 RRVEVP----EDFGVGQEITSYTAREPDTFMDQKITYRIWRDTANWLEINPETGAIFTRAEMDREDAEHVKNSTYVALII 412 (550)
T ss_dssp CEEEEE----TTCCSSCEEEECCEECCCCSTTCCCEEEEEECTTCCEEECTTTCEEEECSCCCTTCTTTCCSSEEEEEEE
T ss_pred eEEEEe----cCCCCCCEEEEEeCCCCCCCCCCCEEEEEecCCCCcEEEeCCCcEEEECCccCcccccccCCCEEEEEEE
Confidence 999999 999999999999999999975 799999877778999997 999998764 66666 89999999
Q ss_pred EeeCCCCCceeEEEEEEEEeCCcccCcccccC
Q psy4697 218 ATDTGNPPRQASVPAIMHFPEAIVQQASSKLN 249 (383)
Q Consensus 218 a~D~g~p~~sst~tv~I~v~~~~~~~~p~~~~ 249 (383)
|+|+|.|+++++++|.|.| .++|+++|.+..
T Consensus 413 A~D~g~p~~s~~~~v~I~V-~DvNDn~P~~~~ 443 (550)
T 3q2v_A 413 ATDDGSPIATGTGTLLLVL-LDVNDNAPIPEP 443 (550)
T ss_dssp EECCSSSCCCEEEEEEEEE-ECCCCCCCEESC
T ss_pred EEeCCCCcceeEEEEEEEE-EeCCCCCCcCcC
Confidence 9999999999999999999 789999998753
No 4
>3ubh_A Neural-cadherin; cell adhesion; 2.70A {Drosophila melanogaster}
Probab=100.00 E-value=1.4e-40 Score=332.91 Aligned_cols=227 Identities=24% Similarity=0.351 Sum_probs=206.6
Q ss_pred CCcCCCCeEEEEEEEEECCCC----CceEEEEEEEEEeeCCCCCCeeecCcEEEEEECCCCCCcEEEEEEeEeCCCCeeE
Q psy4697 3 NEDDFLQPITLVVRAIQYDNQ----DRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVK 78 (383)
Q Consensus 3 ~DrE~~~~y~l~V~a~D~g~~----~~~s~~~v~V~V~DvNdn~P~F~~~~y~~~V~En~~~gt~v~~v~A~D~D~~~v~ 78 (383)
.|+|...+|.|+|+|+|.|.+ .++++++++|.|.| |||+|.|.+..|.++|+||.++|+.|++|.|+|+|++.++
T Consensus 174 ld~e~~~~y~l~V~A~D~g~~~~~~~~~~t~~v~I~V~d-ndn~P~F~~~~y~~~v~En~~~gt~v~~v~A~D~dn~~i~ 252 (419)
T 3ubh_A 174 DLFQLDMEYVLYVKAEDQNGKVDDRRFQSTPEERLSIVG-GKRAPQFYMPSYEAEIPENQKKDSDIISIKAKSFADREIR 252 (419)
T ss_dssp SCCCBTCEEEEEEEEEEEEEEC--CCEEECCCEEEEEEE-SCCCCEESSSCEEEEEETTCCTTCEEEECCEECSSCCCCE
T ss_pred cccccccEEEEEEEEEECCCCccCcccccceEEEEEEEC-CCCCCceecCeeEEEecCCCCCCcEEEEEEEecCCCCceE
Confidence 578889999999999998764 56888899999999 9999999999999999999999999999999999999999
Q ss_pred EEEec--CCCCCEEEcC-cccEEEcccCCcccCc---EEEEEEEEec-C-CceeEEEEEEEEeecCCCCCcccCCceeE-
Q psy4697 79 YWLSN--DYGERFSISR-QGDISLMQCLDYETED---SYRFTVYATD-T-LMTTSATVNISVVNVNDWDPRFRYPQYEL- 149 (383)
Q Consensus 79 Ysi~~--~~~~~F~Id~-tG~I~~~~~LD~E~~~---~y~~~V~A~D-~-~~~s~~tV~I~V~DvNDn~P~f~~~~~~~- 149 (383)
|+|.. +..++|.|++ +|.|++.++||||... .|.|+|.|+| + +++++++|.|+|+|+|||+|+|..+.|..
T Consensus 253 Ysi~~~~~~~~~F~I~~~tG~i~~~~~LD~E~~~~~~~y~l~V~a~dd~~~~s~~~~v~I~V~DvNDn~P~f~~~~~~~~ 332 (419)
T 3ubh_A 253 YTLKAQGQGAGTFNIGPTSGIVKLAKELDFEDLRQPHVYSLIVTATEDSGGFSTSVDLTIRVTDVNDNAPKFELPDYQAH 332 (419)
T ss_dssp EEEEESSSCCSSEEECTTTCEEEECSCCCTTCTTSCSEEEEEEEEECTTTSCEEEEEEEEEEECCCCCCCEESSSEEEEE
T ss_pred EEEecCCCCCCcEEEECCCCEEEECcccCccccccccEEEEEEEEEeCCCCcEEEEEEEEEEEccCCCCCcccCCcceeE
Confidence 99963 5678999996 9999999999999865 7999999995 3 48899999999999999999999998886
Q ss_pred EEeccCCCCCCCCceEEEEEeeeCCCCC--eEEEEEeCCCCCCEEEcCCCcEEEecc-CCCC-cceEEEEEEEeeCCCCC
Q psy4697 150 FLPHIPLADLTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSINDSGHISIVDL-SALN-TSTIQLVVVATDTGNPP 225 (383)
Q Consensus 150 ~v~~~~~e~~~~g~~v~~v~A~D~D~g~--~i~ysi~~~~~~~F~i~~tG~i~l~~~-~~~~-~~~y~L~V~a~D~g~p~ 225 (383)
.++ |+.++|+.|++|.|+|+|.|. .++|+|.+ ++|.|+++|.|++.+. +++. ...|.|.|.|+|+|.|+
T Consensus 333 ~v~----E~~~~gt~v~~v~A~D~D~g~n~~v~Y~i~~---~~F~Id~~G~i~~~~~ld~E~~~~~y~l~V~a~D~G~p~ 405 (419)
T 3ubh_A 333 NVD----EDIPLGTSILRVKAMDSDSGSNAEIEYLVSD---DHFAVDSNGIIVNNKQLDADNNNAYYEFIVTAKDKGEPP 405 (419)
T ss_dssp EEE----TTCCTTCEEEECCEECSSCGGGGCEEEEESC---TTEEECTTCEEEECSCSSSSCTTCEEEEEEEEEECCSSC
T ss_pred Eec----CCCCCCCEEEEEEEEeCCCCCCCEEEEEEcC---CcEEECCCeEEEECcccCcccCCceEEEEEEEEECCcCC
Confidence 799 999999999999999999986 69999963 4899999999998765 5665 57899999999999999
Q ss_pred ceeEEEEEEEEe
Q psy4697 226 RQASVPAIMHFP 237 (383)
Q Consensus 226 ~sst~tv~I~v~ 237 (383)
++++++|.|.|.
T Consensus 406 ~sst~~v~I~v~ 417 (419)
T 3ubh_A 406 KSGVATVRVYTK 417 (419)
T ss_dssp CEEEEEEEEEEE
T ss_pred ceeEEEEEEEEe
Confidence 999999999984
No 5
>3ubf_A Neural-cadherin; cell adhesion; 2.50A {Drosophila melanogaster} PDB: 3ubg_A
Probab=100.00 E-value=2.7e-40 Score=319.03 Aligned_cols=233 Identities=17% Similarity=0.238 Sum_probs=199.9
Q ss_pred CCcCC-----CCeEEEEEEEEECCCC-CceEEEEEEEEEeeCCCCCCeeecCc--EEEEEECCCCCCcEEEEEEeEeCCC
Q psy4697 3 NEDDF-----LQPITLVVRAIQYDNQ-DRYALATLIVSKAGTSLRELQFSKNE--YSVSALENLPVNYVLLTVTTNKPRD 74 (383)
Q Consensus 3 ~DrE~-----~~~y~l~V~a~D~g~~-~~~s~~~v~V~V~DvNdn~P~F~~~~--y~~~V~En~~~gt~v~~v~A~D~D~ 74 (383)
.|||. ...|.|+|+|.|.|.| +++++++|+|.|.|+|||+|.|.+.. |.+.|+||.++|+.|+++.|+|+|.
T Consensus 58 LD~E~~~~~~~~~~~l~v~a~d~~~~~~~s~~~~v~I~V~DvNDn~P~F~~~~~~y~~~v~En~~~gt~v~~v~A~D~D~ 137 (316)
T 3ubf_A 58 WDYEELGPEKTIDFWVIITNMGHNAGIKYTDNQRVIILVKDVNDEPPYFINRPLPMQAVVQLNAPPNTPVFTLQARDPDT 137 (316)
T ss_dssp CCGGGSCTTCEEEEEEEEEC-------CCCEEEEEEEEEECTTCCCCEECCSSSSEEEEECTTCCTTCEEEECCEECSST
T ss_pred cChhhcccccceEEEEEEEEcCCCCCCcccceEEEEEEEEECCCCCCccCCCCCCEEEEEeCCCCCCCEEEEEEEECCCC
Confidence 36776 4579999999998876 67999999999999999999999987 8999999999999999999999997
Q ss_pred -CeeEEEEec-CCCCCEEEcC-cccEEEcccCCcccCcEEEEEEEEecCC-------ceeEEEEEEEEeecCCCCCcccC
Q psy4697 75 -LRVKYWLSN-DYGERFSISR-QGDISLMQCLDYETEDSYRFTVYATDTL-------MTTSATVNISVVNVNDWDPRFRY 144 (383)
Q Consensus 75 -~~v~Ysi~~-~~~~~F~Id~-tG~I~~~~~LD~E~~~~y~~~V~A~D~~-------~~s~~tV~I~V~DvNDn~P~f~~ 144 (383)
..++|+|.. +..++|.|++ +|.|++.++||||....|.|+|.|+|++ ++++++|+|.|.| |||+|+|..
T Consensus 138 g~ni~Y~i~~~~~~~~F~Id~~tG~i~~~~~lD~e~~~~y~l~V~A~D~g~~~~~~~~~~~~~v~I~V~d-nDn~P~F~~ 216 (316)
T 3ubf_A 138 DHNIHYFIVRDRTGGRFEVDERSGVVRTRGTDLFQLDMEYVLYVKAEDQNGKVDDRRFQSTPEERLSIVG-GKRAPQFYM 216 (316)
T ss_dssp TCCEEEEEEEEESSSCEEECTTTCEEEECSSCCCCTTCEEEEEEEEEESCC-------CBCCCEEEEEEE-SCCCCEESS
T ss_pred CCceEEEEEeCCCCCEEEEECCccEEEECCcCCcccCcEEEEEEEEEeCCCCCCCccccceEEEEEEEEc-CCCCCEEcC
Confidence 559999985 5667999996 9999999999999999999999999975 5678899999999 999999999
Q ss_pred CceeEEEeccCCCCCCCCceEEEEEeeeCCCCCeEEEEEe--CCCCCCEEEcC-CCcEEEecc-CCCCc---ceEEEEEE
Q psy4697 145 PQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR--GPYEKMFSIND-SGHISIVDL-SALNT---STIQLVVV 217 (383)
Q Consensus 145 ~~~~~~v~~~~~e~~~~g~~v~~v~A~D~D~g~~i~ysi~--~~~~~~F~i~~-tG~i~l~~~-~~~~~---~~y~L~V~ 217 (383)
+.|.+.++ |+.++|+.|+++.|+|+| +..++|+|. ++..++|.|++ +|.|++.+. +++.. ..|.|.|.
T Consensus 217 ~~y~~~v~----En~~~gt~v~~v~A~D~D-n~~i~Y~i~~~~~~~~~F~Id~~tG~i~~~~~LD~E~~~~~~~y~l~V~ 291 (316)
T 3ubf_A 217 PSYEAEIP----ENQKKDSDIISIKAKSFA-DREIRYTLKAQGQGAGTFNIGPTSGIVKLAKELDFEDLRQPHVYSLIVT 291 (316)
T ss_dssp SSEEEEEE----TTCCTTCEEEECCEECTT-CCCEEEEEEEESSCTTTEEECTTTCEEEECSCCCSSCTTSCSEEEEEEE
T ss_pred CCceEEEe----CCCCCCCEEEEEEEEeCC-CCEEEEEEEcCCCCCCeEEEECCeEEEEECCcCCccccCCCceEEEEEE
Confidence 99999999 999999999999999999 567999995 66778999997 999998765 66655 68999999
Q ss_pred EeeCCCCCceeEEEEEEEEeCCcccC
Q psy4697 218 ATDTGNPPRQASVPAIMHFPEAIVQQ 243 (383)
Q Consensus 218 a~D~g~p~~sst~tv~I~v~~~~~~~ 243 (383)
|+|.+. +++++++|+|.| .+.|++
T Consensus 292 A~dd~g-~~~~~~~v~I~V-~DvNDn 315 (316)
T 3ubf_A 292 ATEDSG-GFSTSVDLTIRV-TDVNDN 315 (316)
T ss_dssp EEESSS-SCEEEEEEEEEE-ECC---
T ss_pred EEECCC-CCEEEEEEEEEE-EecCCC
Confidence 995333 589999999999 666664
No 6
>1l3w_A EP-cadherin, C-cadherin; cell adhesion, calcium binding, extracellular, ECT metal binding protein; HET: NAG NDG; 3.08A {Xenopus laevis} SCOP: b.1.6.1 b.1.6.1 b.1.6.1 b.1.6.1 b.1.6.1
Probab=100.00 E-value=4.4e-41 Score=346.99 Aligned_cols=240 Identities=18% Similarity=0.264 Sum_probs=221.8
Q ss_pred CCcCCCCeEEEEEEEEECCCCCceEEEEEEEEEeeCCCCCCeeecCcEEEEEECCCCCCcEEEEEEeEeCC--C---Cee
Q psy4697 3 NEDDFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPR--D---LRV 77 (383)
Q Consensus 3 ~DrE~~~~y~l~V~a~D~g~~~~~s~~~v~V~V~DvNdn~P~F~~~~y~~~V~En~~~gt~v~~v~A~D~D--~---~~v 77 (383)
.|||..+.|.|+|+|+|.|.|+++++++|+|.|.|+|||+|+|.+..|.++|+|| ++|+.|++|.|+|+| . +.+
T Consensus 185 LD~E~~~~y~l~V~A~D~g~~~~s~~~~v~I~V~DvNDn~P~F~~~~y~~~V~En-~~gt~v~~v~A~D~D~~~g~n~~v 263 (546)
T 1l3w_A 185 LDREKFPEYTLTVQATDLEGAGLSVEGKAIIQITDANDNAPIFDPKTYTALVPEN-EIGFEVQRLSVTDLDMPGTPAWQA 263 (546)
T ss_dssp CCTTTCCEEEEEEEEEHHHHTSCEEECCEEEEEECCCCCCCCBSCSEEEEEEESS-SCCCEEEEECBCCCSCTTSTTSCE
T ss_pred CCcccCceEEEEEEEEECCCCCcceEEEEEEEEeecCCCCCccccccceEEEEeC-CCCCEEEEEEEEeCCCCCCCCcEE
Confidence 4899999999999999999999999999999999999999999999999999999 999999999999999 3 789
Q ss_pred EEEEecCCCCCEEEc-----CcccEEEcccCCcccCcEEEEEEEEecCC------ceeEEEEEEEEeecCCCCCcccCCc
Q psy4697 78 KYWLSNDYGERFSIS-----RQGDISLMQCLDYETEDSYRFTVYATDTL------MTTSATVNISVVNVNDWDPRFRYPQ 146 (383)
Q Consensus 78 ~Ysi~~~~~~~F~Id-----~tG~I~~~~~LD~E~~~~y~~~V~A~D~~------~~s~~tV~I~V~DvNDn~P~f~~~~ 146 (383)
+|+|.++..++|.|+ .+|.|++.++||||....|.|+|+|+|++ ++++++|.|+|.|+|| +|+|..+.
T Consensus 264 ~y~i~~~~~~~F~I~~d~~~~~G~i~~~~~LD~E~~~~y~l~V~a~D~~~~~~~~~s~~~~v~I~V~DvND-~P~f~~~~ 342 (546)
T 1l3w_A 264 VYKIRVNEGGFFNITTDPESNQGILTTAKGLDFELRKQYVLQITVENAEPFSVPLPTSTATVTVTVEDVNE-APFFVPAV 342 (546)
T ss_dssp ECCBSCCTTSCEEEEECTTTCCEEEEESSCCCCSSCCCEEEEECCEESSCCSSCCCCCCEEEEEEEECCCC-CCEESSCE
T ss_pred EEEEEeCCCceEEEEecCCCCeEEEEECccCCcccccEEEEEEEEEECCCCCCCCcceeEEEEEEEEcCCC-CCcEecce
Confidence 999987667799995 37999999999999999999999999964 6789999999999999 99999999
Q ss_pred eeEEEeccCCCCCCCCceEEEEEeeeCCCCC--eEEEEEeCCCCCCEEEcC-CCcEEEecc-CCCCc----ceEEEEEEE
Q psy4697 147 YELFLPHIPLADLTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSIND-SGHISIVDL-SALNT----STIQLVVVA 218 (383)
Q Consensus 147 ~~~~v~~~~~e~~~~g~~v~~v~A~D~D~g~--~i~ysi~~~~~~~F~i~~-tG~i~l~~~-~~~~~----~~y~L~V~a 218 (383)
|.+.|+ |+.++|+.|++|.|+|+|.|. .++|+|.++..++|.|++ +|.|++.+. +++.. ..|.|.|.|
T Consensus 343 y~~~V~----En~~~g~~v~~v~A~D~D~g~n~~i~ysi~~~~~~~F~Id~~tG~i~~~~~lD~E~~~~~~~~y~l~V~a 418 (546)
T 1l3w_A 343 SRVDVS----EDLSRGEKIISLVAQDPDKQQIQKLSYFIGNDPARWLTVNKDNGIVTGNGNLDRESEYVKNNTYTVIMLV 418 (546)
T ss_dssp ECCCBC----TTCCSSEEEEECCEECCCTTCCCCEEEEECCCSSCCCEEETTTTEEEECSCCCTTSSSCCSSCCEEEEEE
T ss_pred EEEEEe----CCCCCCCEEEEEEEECCCCCCCceEEEEECCCCCCcEEEeCCcEEEEECCccCCccccCCCCEEEEEEEE
Confidence 999999 999999999999999999875 799999877778999997 999998764 66665 899999999
Q ss_pred eeCCCCCceeEEEEEEEEeCCcccCcccccC
Q psy4697 219 TDTGNPPRQASVPAIMHFPEAIVQQASSKLN 249 (383)
Q Consensus 219 ~D~g~p~~sst~tv~I~v~~~~~~~~p~~~~ 249 (383)
+|+|.|+++++++|.|.| .++|+++|.|..
T Consensus 419 ~D~g~p~~s~~~~v~I~V-~DvNDn~P~f~~ 448 (546)
T 1l3w_A 419 TDDGVSVGTGTGTLILHV-LDVNDNGPVPSP 448 (546)
T ss_dssp EECSSSCCCCCEEEECCB-CCCCCSCCCBSC
T ss_pred EECCCCCcEeEEEEEEEE-EECCCCcCCccC
Confidence 999999999999999999 889999998863
No 7
>3q2w_A Cadherin-2; cell adhesion, calcium binding; HET: MAN NAG; 3.20A {Mus musculus}
Probab=100.00 E-value=1.3e-39 Score=336.89 Aligned_cols=240 Identities=20% Similarity=0.315 Sum_probs=218.5
Q ss_pred CCcCCCCeEEEEEEEEECCC---CCceEEEEEEEEEeeCCCCCCeeecCcEEEEEECCCCCCcEEEEEEeEeCCC-----
Q psy4697 3 NEDDFLQPITLVVRAIQYDN---QDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRD----- 74 (383)
Q Consensus 3 ~DrE~~~~y~l~V~a~D~g~---~~~~s~~~v~V~V~DvNdn~P~F~~~~y~~~V~En~~~gt~v~~v~A~D~D~----- 74 (383)
.|||..+.|.|+|+|+|.|+ ++++++++|+|.|.|+|||+|+|.+..|.+.|+||. +|+.|+++.|+|+|.
T Consensus 178 LD~E~~~~y~l~V~A~D~~g~p~~~~s~t~~v~I~V~DvNDn~P~f~~~~y~~~V~En~-~g~~v~~v~a~D~D~~~~~n 256 (559)
T 3q2w_A 178 LDREKVQQYTLIIQATDMEGNPTYGLSNTATAVITVTDVNDNPPEFTAMTFYGEVPENR-VDVIVANLTVTDKDQPHTPA 256 (559)
T ss_dssp CCTTTCCEEEEEEEEEHHHHCTTTCCEEEEEEEEEEECCSCSCCEESSSEEEEEEESSC-SSEEEEEEEEECCSCTTSTT
T ss_pred CCcccCCEEEEEEEEEECCCCCCCCccceEEEEEEEEeCCCCCCccccccceeEecCCC-CCcEEEEEEEEcCCCCCCCc
Confidence 48999999999999999754 468999999999999999999999999999999997 899999999999996
Q ss_pred CeeEEEEec-CCCCCEEE----c-CcccEEEcccCCcccCcEEEEEEEEecCC---------ceeEEEEEEEEeecCCCC
Q psy4697 75 LRVKYWLSN-DYGERFSI----S-RQGDISLMQCLDYETEDSYRFTVYATDTL---------MTTSATVNISVVNVNDWD 139 (383)
Q Consensus 75 ~~v~Ysi~~-~~~~~F~I----d-~tG~I~~~~~LD~E~~~~y~~~V~A~D~~---------~~s~~tV~I~V~DvNDn~ 139 (383)
+.++|+|.. +..++|.| + .+|.|++.++||||....|.|+|.|+|++ ++++++|.|.|.|+|| +
T Consensus 257 ~~~~y~i~~g~~~~~F~I~~~~~~~~G~i~~~~~LD~E~~~~y~l~V~A~D~~~~~~g~~~~~~s~~~v~I~V~DvND-~ 335 (559)
T 3q2w_A 257 WNAAYRISGGDPTGRFAILTDPNSNDGLVTVVKPIDFETNRMFVLTVAAENQVPLAKGIQHPPQSTATVSVTVIDVNE-N 335 (559)
T ss_dssp TSBCCEEEESCTTCCEEEEECTTTCEEEEEECSCCCTTTCSEEEEEEECCBSSCCCTTCCCCGGGEEEEEEEEECCCC-C
T ss_pred eeEEEEEecCCCCCceEEEecCCCCcEEEEeCCCCCCccCceEEEEEEEEcCCccccCCCCCCceEEEEEEEEEeCCC-C
Confidence 369999976 55779999 4 49999999999999999999999999952 5789999999999999 6
Q ss_pred CcccCCceeEEEeccCCCCCCCCceEEEEEeeeCCCCC--eEEEEEeCCCCCCEEEcC-CCcEEEecc-CCCCc----ce
Q psy4697 140 PRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSIND-SGHISIVDL-SALNT----ST 211 (383)
Q Consensus 140 P~f~~~~~~~~v~~~~~e~~~~g~~v~~v~A~D~D~g~--~i~ysi~~~~~~~F~i~~-tG~i~l~~~-~~~~~----~~ 211 (383)
|.|....|.+.++ |+.++|+.|++|.|+|+|.|. .++|+|.++..++|.|++ +|.|++.+. +++.. ..
T Consensus 336 P~f~~~~~~~~v~----En~~~g~~v~~v~A~D~D~g~n~~i~Ysi~~~~~~~f~Id~~tG~i~~~~~lDrE~~~~~~~~ 411 (559)
T 3q2w_A 336 PYFAPNPKIIRQE----EGLHAGTMLTTLTAQDPDRYMQQNIRYTKLSDPANWLKIDPVNGQITTIAVLDRESPNVKNNI 411 (559)
T ss_dssp CEESSSEEEEEEE----SCCCTTCEEEECCEECSCSSSCCCEEEEEEECTTCCEEECTTTCEEEESSCCCSSSTTSCSSE
T ss_pred CcccccceEEEEe----CCCCCCCEEEEEEEECCCCCCCCceEEEEccCCccceEecCCceEEEEccccCcccccccCCE
Confidence 9999999999999 999999999999999999974 699999877778999997 999998764 55543 89
Q ss_pred EEEEEEEeeCCCCCceeEEEEEEEEeCCcccCcccccC
Q psy4697 212 IQLVVVATDTGNPPRQASVPAIMHFPEAIVQQASSKLN 249 (383)
Q Consensus 212 y~L~V~a~D~g~p~~sst~tv~I~v~~~~~~~~p~~~~ 249 (383)
|.|+|.|+|+|.|+++++++|.|.| .+.|+++|.+..
T Consensus 412 y~l~V~A~D~g~p~~ss~~~v~I~V-~DvNDn~P~f~~ 448 (559)
T 3q2w_A 412 YNATFLASDNGIPPMSGTGTLQIYL-LDINDNAPQVLP 448 (559)
T ss_dssp EEEEEEEEECSSSCCEEEEEEEEEE-ECCSCCCCEESC
T ss_pred EEEEEEEEcCCCCcceEEEEEEEEE-EEccCCCCcccC
Confidence 9999999999999999999999999 889999998864
No 8
>3q2w_A Cadherin-2; cell adhesion, calcium binding; HET: MAN NAG; 3.20A {Mus musculus}
Probab=100.00 E-value=1.4e-39 Score=336.73 Aligned_cols=240 Identities=19% Similarity=0.267 Sum_probs=216.0
Q ss_pred CCcCCCCeEEEEEEEEECCCCCceEEEEEEEEEeeCCCCCCeeecCcEEEEEECCCCCCcEEEEEEeEeCCC-----Cee
Q psy4697 3 NEDDFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRD-----LRV 77 (383)
Q Consensus 3 ~DrE~~~~y~l~V~a~D~g~~~~~s~~~v~V~V~DvNdn~P~F~~~~y~~~V~En~~~gt~v~~v~A~D~D~-----~~v 77 (383)
.|||....|.|+|+|.|.|++.+++.+.|.|.|.|+|||+|+|.+..|.++|+||.++|+.|+++.|+|+|. +.+
T Consensus 66 LDrE~~~~y~l~v~a~D~g~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~V~En~~~Gt~v~~v~A~D~D~g~~~n~~v 145 (559)
T 3q2w_A 66 LDRELIARFHLRAHAVDINGNQVENPIDIVINVIDMNDNRPEFLHQVWNGSVPEGSKPGTYVMTVTAIDADDPNALNGML 145 (559)
T ss_dssp CCTTTCSEEEEEEEEEETTSCEEEEEEEEEEEEECCCCCCCEESCSEEEEEEETTCCTTCEEEECCEECSSCTTSGGGCC
T ss_pred cCCCCCceEEEEEEEEECCCCccceeEEEEEEEEeCCCCCCccCCCeeEEEEeCCCCCCcEEEEEEEEcCCCCCCCceEE
Confidence 489999999999999999999999999999999999999999999999999999999999999999999994 679
Q ss_pred EEEEecCC-----CCCEEEcC-cccEEEcc-cCCcccCcEEEEEEEEecC------CceeEEEEEEEEeecCCCCCcccC
Q psy4697 78 KYWLSNDY-----GERFSISR-QGDISLMQ-CLDYETEDSYRFTVYATDT------LMTTSATVNISVVNVNDWDPRFRY 144 (383)
Q Consensus 78 ~Ysi~~~~-----~~~F~Id~-tG~I~~~~-~LD~E~~~~y~~~V~A~D~------~~~s~~tV~I~V~DvNDn~P~f~~ 144 (383)
+|+|.+.. .++|.|++ +|.|++.+ .||||....|.|.|+|+|+ +++++++|.|+|.|+|||+|+|..
T Consensus 146 ~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~~LD~E~~~~y~l~V~A~D~~g~p~~~~s~t~~v~I~V~DvNDn~P~f~~ 225 (559)
T 3q2w_A 146 RYRILSQAPSTPSPNMFTINNETGDIITVAAGLDREKVQQYTLIIQATDMEGNPTYGLSNTATAVITVTDVNDNPPEFTA 225 (559)
T ss_dssp EEEEEEEESCCSCTTCEEECTTTCEEEECCSCCCTTTCCEEEEEEEEEHHHHCTTTCCEEEEEEEEEEECCSCSCCEESS
T ss_pred EEEEecCCCCCCCcceEEEeCCceEEEEEeccCCcccCCEEEEEEEEEECCCCCCCCccceEEEEEEEEeCCCCCCcccc
Confidence 99997622 26899996 99999987 9999999999999999995 278999999999999999999999
Q ss_pred CceeEEEeccCCCCCCCCceEEEEEeeeCCCCC----eEEEEEe-CCCCCCEEE----cC-CCcEEEec-cCCCCcceEE
Q psy4697 145 PQYELFLPHIPLADLTPGSVIGKVEAADGDKGD----RVTLSLR-GPYEKMFSI----ND-SGHISIVD-LSALNTSTIQ 213 (383)
Q Consensus 145 ~~~~~~v~~~~~e~~~~g~~v~~v~A~D~D~g~----~i~ysi~-~~~~~~F~i----~~-tG~i~l~~-~~~~~~~~y~ 213 (383)
..|.+.|+ |+. +|+.++++.|+|+|.|. .++|+|. ++..+.|.| +. +|.|++.+ ++++....|.
T Consensus 226 ~~y~~~V~----En~-~g~~v~~v~a~D~D~~~~~n~~~~y~i~~g~~~~~F~I~~~~~~~~G~i~~~~~LD~E~~~~y~ 300 (559)
T 3q2w_A 226 MTFYGEVP----ENR-VDVIVANLTVTDKDQPHTPAWNAAYRISGGDPTGRFAILTDPNSNDGLVTVVKPIDFETNRMFV 300 (559)
T ss_dssp SEEEEEEE----SSC-SSEEEEEEEEECCSCTTSTTTSBCCEEEESCTTCCEEEEECTTTCEEEEEECSCCCTTTCSEEE
T ss_pred ccceeEec----CCC-CCcEEEEEEEEcCCCCCCCceeEEEEEecCCCCCceEEEecCCCCcEEEEeCCCCCCccCceEE
Confidence 99999999 997 89999999999999874 5999997 666789999 44 89998876 4788899999
Q ss_pred EEEEEeeCC------CCCceeEEEEEEEEeCCcccCcccccC
Q psy4697 214 LVVVATDTG------NPPRQASVPAIMHFPEAIVQQASSKLN 249 (383)
Q Consensus 214 L~V~a~D~g------~p~~sst~tv~I~v~~~~~~~~p~~~~ 249 (383)
|.|.|+|.+ .|+++++++|.|.| .++|+ +|.|..
T Consensus 301 l~V~A~D~~~~~~g~~~~~~s~~~v~I~V-~DvND-~P~f~~ 340 (559)
T 3q2w_A 301 LTVAAENQVPLAKGIQHPPQSTATVSVTV-IDVNE-NPYFAP 340 (559)
T ss_dssp EEEECCBSSCCCTTCCCCGGGEEEEEEEE-ECCCC-CCEESS
T ss_pred EEEEEEcCCccccCCCCCCceEEEEEEEE-EeCCC-CCcccc
Confidence 999999974 37899999999999 67777 466643
No 9
>1l3w_A EP-cadherin, C-cadherin; cell adhesion, calcium binding, extracellular, ECT metal binding protein; HET: NAG NDG; 3.08A {Xenopus laevis} SCOP: b.1.6.1 b.1.6.1 b.1.6.1 b.1.6.1 b.1.6.1
Probab=100.00 E-value=8.8e-40 Score=337.25 Aligned_cols=240 Identities=18% Similarity=0.231 Sum_probs=216.1
Q ss_pred CCcCCCCeEEEEEEEEECCCCCceEEEEEEEEEeeCCCCCCeeecCcEEEEEECCCCCCcEEEEEEeEeCCC------Ce
Q psy4697 3 NEDDFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRD------LR 76 (383)
Q Consensus 3 ~DrE~~~~y~l~V~a~D~g~~~~~s~~~v~V~V~DvNdn~P~F~~~~y~~~V~En~~~gt~v~~v~A~D~D~------~~ 76 (383)
.|||....|.|+|+|.|.|.+++++.+.|+|.|.|+|||+|+|.+..|.++|+||.++|+.|+++.|+|+|. +.
T Consensus 72 LDrE~~~~y~l~v~A~D~~~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~V~En~~~gt~v~~v~A~D~D~g~~~~n~~ 151 (546)
T 1l3w_A 72 LDREEYDKYVLSSHAVSENGSPVEEPMEITINVIDQNDNRPKFTQDVFRGSVREGVQPGTQVMAVSATDEDDNIDSLNGV 151 (546)
T ss_dssp CCTTTCCEEEEEEEEEESSSCBCSCCEEEEEEEECCSCCCCEESSSCEEEEEETTCCSSEEEEECCEECCSCCSSSSTTC
T ss_pred CCcccCceEEEEEEEEeCCCCcccceEEEEEEEEecccCcCEecCceeEEEEECCCCCCCEEEEEEEEcCCCCCCCCCCE
Confidence 489999999999999999988888889999999999999999999999999999999999999999999995 58
Q ss_pred eEEEEecC-----CCCCEEEcC-cccEEEc-ccCCcccCcEEEEEEEEecCC---ceeEEEEEEEEeecCCCCCcccCCc
Q psy4697 77 VKYWLSND-----YGERFSISR-QGDISLM-QCLDYETEDSYRFTVYATDTL---MTTSATVNISVVNVNDWDPRFRYPQ 146 (383)
Q Consensus 77 v~Ysi~~~-----~~~~F~Id~-tG~I~~~-~~LD~E~~~~y~~~V~A~D~~---~~s~~tV~I~V~DvNDn~P~f~~~~ 146 (383)
++|+|.+. ..++|.|++ +|.|++. +.||||....|.|.|+|+|++ ++++++|.|+|.|+|||+|+|....
T Consensus 152 v~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~~LD~E~~~~y~l~V~A~D~g~~~~s~~~~v~I~V~DvNDn~P~F~~~~ 231 (546)
T 1l3w_A 152 LSYSILKQDPEEPIPNLFTINRETGVISLIGTGLDREKFPEYTLTVQATDLEGAGLSVEGKAIIQITDANDNAPIFDPKT 231 (546)
T ss_dssp CEEEEEEESSCCSCSCSEEECTTTCEEEECSCCCCTTTCCEEEEEEEEEHHHHTSCEEECCEEEEEECCCCCCCCBSCSE
T ss_pred EEEEEeCCCCCcccCCcEEEeCCCceEEEeccCCCcccCceEEEEEEEEECCCCCcceEEEEEEEEeecCCCCCcccccc
Confidence 99999873 347999996 9999985 799999999999999999964 7899999999999999999999999
Q ss_pred eeEEEeccCCCCCCCCceEEEEEeeeCC--CCC--eEEEEEeCCCCCCEEEc-----CCCcEEEecc-CCCCcceEEEEE
Q psy4697 147 YELFLPHIPLADLTPGSVIGKVEAADGD--KGD--RVTLSLRGPYEKMFSIN-----DSGHISIVDL-SALNTSTIQLVV 216 (383)
Q Consensus 147 ~~~~v~~~~~e~~~~g~~v~~v~A~D~D--~g~--~i~ysi~~~~~~~F~i~-----~tG~i~l~~~-~~~~~~~y~L~V 216 (383)
|.+.|+ |+ ++|+.|+++.|+|+| .|. .++|+|.++..+.|.|+ .+|.|++.+. +++....|.|.|
T Consensus 232 y~~~V~----En-~~gt~v~~v~A~D~D~~~g~n~~v~y~i~~~~~~~F~I~~d~~~~~G~i~~~~~LD~E~~~~y~l~V 306 (546)
T 1l3w_A 232 YTALVP----EN-EIGFEVQRLSVTDLDMPGTPAWQAVYKIRVNEGGFFNITTDPESNQGILTTAKGLDFELRKQYVLQI 306 (546)
T ss_dssp EEEEEE----SS-SCCCEEEEECBCCCSCTTSTTSCEECCBSCCTTSCEEEEECTTTCCEEEEESSCCCCSSCCCEEEEE
T ss_pred ceEEEE----eC-CCCCEEEEEEEEeCCCCCCCCcEEEEEEEeCCCceEEEEecCCCCeEEEEECccCCcccccEEEEEE
Confidence 999999 99 999999999999999 554 69999987666799995 3799988764 777889999999
Q ss_pred EEeeCC---CCCceeEEEEEEEEeCCcccCcccccC
Q psy4697 217 VATDTG---NPPRQASVPAIMHFPEAIVQQASSKLN 249 (383)
Q Consensus 217 ~a~D~g---~p~~sst~tv~I~v~~~~~~~~p~~~~ 249 (383)
.|+|+| .|+++++++|.|.| .+.|+ +|.|..
T Consensus 307 ~a~D~~~~~~~~~s~~~~v~I~V-~DvND-~P~f~~ 340 (546)
T 1l3w_A 307 TVENAEPFSVPLPTSTATVTVTV-EDVNE-APFFVP 340 (546)
T ss_dssp CCEESSCCSSCCCCCCEEEEEEE-ECCCC-CCEESS
T ss_pred EEEECCCCCCCCcceeEEEEEEE-EcCCC-CCcEec
Confidence 999987 46789999999999 66777 776643
No 10
>3q2v_A Cadherin-1; cell adhesion, calcium binding; HET: MAN; 3.40A {Mus musculus}
Probab=100.00 E-value=4.6e-39 Score=332.21 Aligned_cols=244 Identities=16% Similarity=0.241 Sum_probs=218.9
Q ss_pred CCcCCCCeEEEEEEEEECCCCCceEEEEEEEEEeeCCCCCCeeecCcEEEEEECCCCCCcEEEEEEeEeCCC------Ce
Q psy4697 3 NEDDFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRD------LR 76 (383)
Q Consensus 3 ~DrE~~~~y~l~V~a~D~g~~~~~s~~~v~V~V~DvNdn~P~F~~~~y~~~V~En~~~gt~v~~v~A~D~D~------~~ 76 (383)
.|||....|.|+|.|.|.+++..++.+.|.|.|.|+|||+|.|.+..|.++|+||.++|+.++++.|+|+|. +.
T Consensus 66 LDrE~~~~y~l~v~a~d~~~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~V~E~~~~Gt~v~~v~A~D~D~g~~~~N~~ 145 (550)
T 3q2v_A 66 LDREAIAKYILYSHAVSSNGEAVEDPMEIVITVTDQNDNRPEFTQEVFEGSVAEGAVPGTSVMKVSATDADDDVNTYNAA 145 (550)
T ss_dssp CCTTTCSEEEEEEEEEETTSCBCSCCEEEEEEEECCSCCCCCBSCSEEEEEEETTCCTTCEEEECCBCCCSCTTTCGGGC
T ss_pred cCcccCCeeEEEEEEEeCCCCcccceEEEEEEEEecCCCCCccCCCceEEEEeCCCCCCCEEEEEEEEeCCCCCCCcceE
Confidence 489999999999999999988888889999999999999999999999999999999999999999999995 48
Q ss_pred eEEEEecC-----CCCCEEEcC-cccEEE-cccCCcccCcEEEEEEEEecC---CceeEEEEEEEEeecCCCCCcccCCc
Q psy4697 77 VKYWLSND-----YGERFSISR-QGDISL-MQCLDYETEDSYRFTVYATDT---LMTTSATVNISVVNVNDWDPRFRYPQ 146 (383)
Q Consensus 77 v~Ysi~~~-----~~~~F~Id~-tG~I~~-~~~LD~E~~~~y~~~V~A~D~---~~~s~~tV~I~V~DvNDn~P~f~~~~ 146 (383)
++|+|.+. ..++|.|++ +|.|++ .+.||||....|.|+|+|+|+ +++++++|.|+|.|+|||+|+|....
T Consensus 146 i~Ysi~~~~~~~~~~~~F~id~~tG~i~~~~~~LDrE~~~~y~l~V~A~D~g~~~~s~t~~v~I~V~DvNDn~P~F~~~~ 225 (550)
T 3q2v_A 146 IAYTIVSQDPELPHKNMFTVNRDTGVISVLTSGLDRESYPTYTLVVQAADLQGEGLSTTAKAVITVKDINDNAPVFNPST 225 (550)
T ss_dssp CEEEEEEEESCCSSSCSEEECTTTCEEEECSSCCCTTTCSEEEEEEEEESGGGTSCCCEEEEEEEEECCSCSCCEESSSE
T ss_pred EEEEEecCCCCCCcCCceEEcCCCeEEEEccCCCCcccCcEEEEEEEEEcCCCCCeeEEEEEEEEecccCCCCCEEecce
Confidence 99999762 356899996 999988 489999999999999999995 38899999999999999999999999
Q ss_pred eeEEEeccCCCCCCCCceEEEEEeeeCCCCC----eEEEEEeCCCCCCEEEc----C-CCcEEEec-cCCCCcceEEEEE
Q psy4697 147 YELFLPHIPLADLTPGSVIGKVEAADGDKGD----RVTLSLRGPYEKMFSIN----D-SGHISIVD-LSALNTSTIQLVV 216 (383)
Q Consensus 147 ~~~~v~~~~~e~~~~g~~v~~v~A~D~D~g~----~i~ysi~~~~~~~F~i~----~-tG~i~l~~-~~~~~~~~y~L~V 216 (383)
|.+.++ |+ ++|+.|+++.|+|+|.|. .+.|+|.++..+.|.|+ . +|.|++.+ ++++....|.|.|
T Consensus 226 y~~~V~----En-~~g~~v~~v~a~D~D~~~n~~~~~~ysi~~~~~~~F~i~~d~~~~tG~i~~~~~LD~E~~~~y~l~V 300 (550)
T 3q2v_A 226 YQGQVP----EN-EVNARIATLKVTDDDAPNTPAWKAVYTVVNDPDQQFVVVTDPTTNDGILKTAKGLDFEAKQQYILHV 300 (550)
T ss_dssp EEEEEE----SS-CSSCCCEEECEECCSCTTSTTTCEEEEESSCSSCCEEEEECTTTCCEEEEESSCCCTTTCSEEEEEE
T ss_pred eEEEEe----cC-CCCCEEEEEEEEECCCCCCCcEEEEEEEEeCCCCcEEEEecCCCccEEEEecccCCccccceEEEEE
Confidence 999999 99 899999999999999885 47899987777899997 4 89999876 4788899999999
Q ss_pred EEeeCC---CCCceeEEEEEEEEeCCcccCcccccCCCCc
Q psy4697 217 VATDTG---NPPRQASVPAIMHFPEAIVQQASSKLNSGTS 253 (383)
Q Consensus 217 ~a~D~g---~p~~sst~tv~I~v~~~~~~~~p~~~~~~~~ 253 (383)
.|+|+| .|+++++++|.|.| .+.|+ +|.|....+.
T Consensus 301 ~a~D~~~~~~~~~~~~~~v~I~V-~DvND-~P~f~~~~~~ 338 (550)
T 3q2v_A 301 RVENEEPFEGSLVPSTATVTVDV-VDVNE-APIFMPAERR 338 (550)
T ss_dssp EEEESSCCCSSCCCEEEEEEEEE-ECCCC-CCEESSSSCE
T ss_pred EEEeCCCCCCCccceEEEEEEEE-EecCC-CCeEcCcceE
Confidence 999987 46689999999999 67777 7777544333
No 11
>1q55_A EP-cadherin, C-cadherin; trans interaction, desmosome, junction, adhesion, structural protein; HET: NAG NDG; 30.00A {Mus musculus} SCOP: i.20.1.1 PDB: 1q5a_A* 1q5b_A* 1q5c_A*
Probab=100.00 E-value=2e-38 Score=342.65 Aligned_cols=240 Identities=18% Similarity=0.231 Sum_probs=216.1
Q ss_pred CCcCCCCeEEEEEEEEECCCCCceEEEEEEEEEeeCCCCCCeeecCcEEEEEECCCCCCcEEEEEEeEeCCC------Ce
Q psy4697 3 NEDDFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRD------LR 76 (383)
Q Consensus 3 ~DrE~~~~y~l~V~a~D~g~~~~~s~~~v~V~V~DvNdn~P~F~~~~y~~~V~En~~~gt~v~~v~A~D~D~------~~ 76 (383)
.|||....|.|+|+|+|.|.+++++.++|+|.|.|+|||+|+|.+..|.++|+||.++|+.|++|.|+|+|. +.
T Consensus 221 LDrE~~~~y~l~v~A~D~g~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~V~En~~~Gt~V~~v~AtD~D~g~~~~N~~ 300 (880)
T 1q55_A 221 LDREEYDKYVLSSHAVSENGSPVEEPMEITINVIDQNDNRPKFTQDVFRGSVREGVQPGTQVMAVSATDEDDNIDSLNGV 300 (880)
T ss_dssp CCTTTCCEEEEEEEEEESSSCBCSCCEEEEEEEECCSCCCCEESSSCEEEEEETTCCSSEEEEECCEECCSCCSSSSTTC
T ss_pred cCccccCccEEEEEEEECCCCceeeeEEEEEEEEecCCCCCCccCCcEEEEEeCCCCCCceeEEEEEEcCCCCCCCcCcE
Confidence 489999999999999999988888999999999999999999999999999999999999999999999995 58
Q ss_pred eEEEEecC-----CCCCEEEcC-cccEEEc-ccCCcccCcEEEEEEEEecCC---ceeEEEEEEEEeecCCCCCcccCCc
Q psy4697 77 VKYWLSND-----YGERFSISR-QGDISLM-QCLDYETEDSYRFTVYATDTL---MTTSATVNISVVNVNDWDPRFRYPQ 146 (383)
Q Consensus 77 v~Ysi~~~-----~~~~F~Id~-tG~I~~~-~~LD~E~~~~y~~~V~A~D~~---~~s~~tV~I~V~DvNDn~P~f~~~~ 146 (383)
++|+|.+. ..++|.|++ +|.|++. +.||||....|.|+|+|+|++ ++++++|.|+|.|+|||+|+|....
T Consensus 301 v~Ysi~~~~~~~~~~~~F~Id~~tG~I~~~~~~LDrE~~~~y~l~V~A~D~g~~~~s~~~~v~I~V~DvNDn~P~F~~~~ 380 (880)
T 1q55_A 301 LSYSILKQDPEEPIPNLFTINRETGVISLIGTGLDREKFPEYTLTVQATDLEGAGLSVEGKAIIQITDANDNAPIFDPKT 380 (880)
T ss_dssp CEEEEEEESSCCSCSCSEEECTTTCEEEECSCCCCTTTCCEEEEEEEEEHHHHTSCEEECCEEEEEECCCCCCCCBSCSE
T ss_pred EEEEEcCCCCCcccCCeEEEccCCccEEEecccCCHHHcceeEEEEEEEECCCCCccceeEEEEEEEeccCCCCCccccc
Confidence 99999873 346999996 9999986 799999999999999999964 7899999999999999999999999
Q ss_pred eeEEEeccCCCCCCCCceEEEEEeeeCC--CCC--eEEEEEeCCCCCCEEEc-----CCCcEEEecc-CCCCcceEEEEE
Q psy4697 147 YELFLPHIPLADLTPGSVIGKVEAADGD--KGD--RVTLSLRGPYEKMFSIN-----DSGHISIVDL-SALNTSTIQLVV 216 (383)
Q Consensus 147 ~~~~v~~~~~e~~~~g~~v~~v~A~D~D--~g~--~i~ysi~~~~~~~F~i~-----~tG~i~l~~~-~~~~~~~y~L~V 216 (383)
|.+.|+ |+ ++|+.|+++.|+|+| .|. .++|+|.++..++|.|+ .+|.|.+.+. +++....|.|.|
T Consensus 381 y~~~V~----En-~~gt~V~~v~A~D~D~~~g~n~~v~Ysi~~~~~~~F~I~~d~~~~~G~i~~~~~LD~E~~~~y~l~V 455 (880)
T 1q55_A 381 YTALVP----EN-EIGFEVQRLSVTDLDMPGTPAWQAVYKIRVNEGGFFNITTDPESNQGILTTAKGLDFELRKQYVLQI 455 (880)
T ss_dssp EEEEEE----SS-SCCCEEEEECBCCCSCTTSTTSCEECCBSCCTTSCEEEEECTTTCCEEEEESSCCCCSSCCCEEEEE
T ss_pred eEEEee----cC-CCCcEEEEEEEECCCCCCCCCceEEEEEecCCCceEEEEecCCCceEEEecccCCCcccCCcEEEEE
Confidence 999999 99 999999999999999 554 69999987667799995 2699988764 778889999999
Q ss_pred EEeeCC---CCCceeEEEEEEEEeCCcccCcccccC
Q psy4697 217 VATDTG---NPPRQASVPAIMHFPEAIVQQASSKLN 249 (383)
Q Consensus 217 ~a~D~g---~p~~sst~tv~I~v~~~~~~~~p~~~~ 249 (383)
.|+|++ .|+++++++|+|.| .++|+ +|.|..
T Consensus 456 ~A~D~~~~~~~~~sst~tV~I~V-~DvND-~P~f~~ 489 (880)
T 1q55_A 456 TVENAEPFSVPLPTSTATVTVTV-EDVNE-APFFVP 489 (880)
T ss_dssp CCEESSCCSSCCCCCCEEEEEEE-ECCCC-CCEESS
T ss_pred EEEECCCCCCCCcceeEEEEEEE-EeCCC-CCEEec
Confidence 999987 46789999999999 66777 776653
No 12
>3ubh_A Neural-cadherin; cell adhesion; 2.70A {Drosophila melanogaster}
Probab=100.00 E-value=2.3e-37 Score=309.55 Aligned_cols=240 Identities=18% Similarity=0.234 Sum_probs=211.6
Q ss_pred CCcCCC---CeEEEEEEEEECCCC---CceEEEEEEEEEeeCCCCCCeeecCc--EEEEEECCCCCCcEEEEEEeEeCCC
Q psy4697 3 NEDDFL---QPITLVVRAIQYDNQ---DRYALATLIVSKAGTSLRELQFSKNE--YSVSALENLPVNYVLLTVTTNKPRD 74 (383)
Q Consensus 3 ~DrE~~---~~y~l~V~a~D~g~~---~~~s~~~v~V~V~DvNdn~P~F~~~~--y~~~V~En~~~gt~v~~v~A~D~D~ 74 (383)
.|||.. ..|.+.|.|+|.|.+ ++++.++|+|.|.|+|||+|.|.+.. |.+.|+||.++|+.|+++.|+|+|.
T Consensus 63 LD~E~~~~~~~~~~~V~a~d~g~~~~~~~~~~~~v~I~V~DvNDn~P~F~~~~~~~~~~v~E~~~~gt~v~~v~A~D~D~ 142 (419)
T 3ubh_A 63 WDYEELGPEKTIDFWVIITNMGHNAGIKYTDNQRVIILVKDVNDEPPYFINRPLPMQAVVQLNAPPNTPVFTLQARDPDT 142 (419)
T ss_dssp CCGGGSCTTCEEEEEEEEEC--CCSSSCCEEEEEEEEEEECCCCSCCEECCSSSSCEEEECTTCCTTCEEEECCEECSST
T ss_pred cCccccCccceEEEEEEEEeCCCCCCCCCcceEEEEEEEEECCCCCCcccCCCCcEEEEEeCCCCCCCEEEEEEEECCCC
Confidence 478887 689999999998865 67888999999999999999999887 8999999999999999999999997
Q ss_pred -CeeEEEEec-CCCCCEEEcC-cccEEEcccCCcccCcEEEEEEEEecCC-------ceeEEEEEEEEeecCCCCCcccC
Q psy4697 75 -LRVKYWLSN-DYGERFSISR-QGDISLMQCLDYETEDSYRFTVYATDTL-------MTTSATVNISVVNVNDWDPRFRY 144 (383)
Q Consensus 75 -~~v~Ysi~~-~~~~~F~Id~-tG~I~~~~~LD~E~~~~y~~~V~A~D~~-------~~s~~tV~I~V~DvNDn~P~f~~ 144 (383)
..++|+|.. +..++|.|++ +|.|++.+.||||....|.|+|+|+|++ ++++++++|.|.| |||+|.|..
T Consensus 143 g~n~~y~i~~~~~~~~F~I~~~tG~i~~~~~ld~e~~~~y~l~V~A~D~g~~~~~~~~~~t~~v~I~V~d-ndn~P~F~~ 221 (419)
T 3ubh_A 143 DHNIHYFIVRDRTGGRFEVDERSGVVRTRGTDLFQLDMEYVLYVKAEDQNGKVDDRRFQSTPEERLSIVG-GKRAPQFYM 221 (419)
T ss_dssp TCCEEEEEEEESSSSCEEECTTTCEEEECSSSCCCBTCEEEEEEEEEEEEEEC--CCEEECCCEEEEEEE-SCCCCEESS
T ss_pred CceeEEEEEeCCCCCeEEEeCCceEEEEecccccccccEEEEEEEEEECCCCccCcccccceEEEEEEEC-CCCCCceec
Confidence 569999986 5567999996 9999999999999999999999999964 4678889999999 999999999
Q ss_pred CceeEEEeccCCCCCCCCceEEEEEeeeCCCCCeEEEEEe--CCCCCCEEEcC-CCcEEEecc-CCCCcc---eEEEEEE
Q psy4697 145 PQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR--GPYEKMFSIND-SGHISIVDL-SALNTS---TIQLVVV 217 (383)
Q Consensus 145 ~~~~~~v~~~~~e~~~~g~~v~~v~A~D~D~g~~i~ysi~--~~~~~~F~i~~-tG~i~l~~~-~~~~~~---~y~L~V~ 217 (383)
+.|.+.|+ |+.++|+.|++|.|+|+| +..++|+|. ++..++|.|++ +|.|++.+. +++... .|.|.|.
T Consensus 222 ~~y~~~v~----En~~~gt~v~~v~A~D~d-n~~i~Ysi~~~~~~~~~F~I~~~tG~i~~~~~LD~E~~~~~~~y~l~V~ 296 (419)
T 3ubh_A 222 PSYEAEIP----ENQKKDSDIISIKAKSFA-DREIRYTLKAQGQGAGTFNIGPTSGIVKLAKELDFEDLRQPHVYSLIVT 296 (419)
T ss_dssp SCEEEEEE----TTCCTTCEEEECCEECSS-CCCCEEEEEESSSCCSSEEECTTTCEEEECSCCCTTCTTSCSEEEEEEE
T ss_pred CeeEEEec----CCCCCCcEEEEEEEecCC-CCceEEEEecCCCCCCcEEEECCCCEEEECcccCccccccccEEEEEEE
Confidence 99999999 999999999999999998 567999995 56678999997 999998764 555543 7999999
Q ss_pred EeeCCCCCceeEEEEEEEEeCCcccCcccccCC
Q psy4697 218 ATDTGNPPRQASVPAIMHFPEAIVQQASSKLNS 250 (383)
Q Consensus 218 a~D~g~p~~sst~tv~I~v~~~~~~~~p~~~~~ 250 (383)
|+|.+ ++++++++|+|.| .+.|+++|.|...
T Consensus 297 a~dd~-~~~s~~~~v~I~V-~DvNDn~P~f~~~ 327 (419)
T 3ubh_A 297 ATEDS-GGFSTSVDLTIRV-TDVNDNAPKFELP 327 (419)
T ss_dssp EECTT-TSCEEEEEEEEEE-ECCCCCCCEESSS
T ss_pred EEeCC-CCcEEEEEEEEEE-EccCCCCCcccCC
Confidence 99754 5689999999999 8899999998643
No 13
>3mvs_A Cadherin-23, otocadherin; adhesion, extracellular domain, cell adhesion; 1.10A {Mus musculus} PDB: 4apx_A* 2whv_A 2wcp_A* 4aq8_A 4axw_A* 4aqe_A* 4aqa_A* 2wd0_A* 2wbx_A
Probab=100.00 E-value=2.3e-37 Score=281.62 Aligned_cols=198 Identities=24% Similarity=0.305 Sum_probs=181.1
Q ss_pred CCCCeeecCcEE--EEEECCCCCCcEEEEEEeEeCCCCeeEEEEec-CCCCCEEEcC-cccEEEcccCCcccCcEEEEEE
Q psy4697 40 LRELQFSKNEYS--VSALENLPVNYVLLTVTTNKPRDLRVKYWLSN-DYGERFSISR-QGDISLMQCLDYETEDSYRFTV 115 (383)
Q Consensus 40 dn~P~F~~~~y~--~~V~En~~~gt~v~~v~A~D~D~~~v~Ysi~~-~~~~~F~Id~-tG~I~~~~~LD~E~~~~y~~~V 115 (383)
|+||+|.+..|. ++|+||.++|+.|+++.|+|+|++.++|+|.+ +..++|.|++ +|.|++.++||||....|.|.|
T Consensus 3 n~~P~F~~~~y~~~~~V~E~~~~Gt~v~~v~A~D~D~~~~~y~i~~~~~~~~F~Id~~tG~i~~~~~LD~E~~~~y~l~v 82 (210)
T 3mvs_A 3 NRLPFFTNHFFDTYLLISEDTPVGSSVTQLLARDMDNDPLVFGVSGEEASRFFAVEPDTGVVWLRQPLDRETKSEFTVEF 82 (210)
T ss_dssp CCCCEECCGGGTSCEEEETTCCTTCEEEECCEECTTCCCCEEEEESHHHHHHEEECTTTCEEEESSCCCTTTCCEEEEEE
T ss_pred CCCCccCCCccceEEEEeCCCCCCCEEEEEEEEeCCCCcEEEEEeCCCCCCcEEEeCCCCEEEECCccCCcccceEEEEE
Confidence 459999999997 79999999999999999999999999999987 3446899996 9999999999999999999999
Q ss_pred EEecCCceeEEEEEEEEeecCCCCCcccCCceeEEEeccCCCCCCCCceEEEEEeeeCCCCC--eEEEEEeCCCCCCEEE
Q psy4697 116 YATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGD--RVTLSLRGPYEKMFSI 193 (383)
Q Consensus 116 ~A~D~~~~s~~tV~I~V~DvNDn~P~f~~~~~~~~v~~~~~e~~~~g~~v~~v~A~D~D~g~--~i~ysi~~~~~~~F~i 193 (383)
.|+|++..++++|.|+|.|+|||+|.|....|.+.++ |+.++|+.|+++.|+|+|.|. .++|+|.+ ..++|.|
T Consensus 83 ~a~D~~~~~~~~v~I~V~DvNDn~P~f~~~~y~~~v~----E~~~~gt~v~~v~A~D~D~g~n~~v~Y~i~~-~~~~F~I 157 (210)
T 3mvs_A 83 SVSDHQGVITRKVNIQVGDVNDNAPTFHNQPYSVRIP----ENTPVGTPIFIVNATDPDLGAGGSVLYSFQP-PSPFFAI 157 (210)
T ss_dssp EEECSSCEEEEEEEEEEECCCCCCCEECSCSEEEEEE----TTCCTTCEEEECCEECCSSGGGGCEEEEESS-CCSSEEE
T ss_pred EEEeCCCCEEEEEEEEEEeCCCCCCcCCCceEEEEEE----CCCCCCCEEEEEEEEeCCCCCCceEEEEEeC-CCCCEEE
Confidence 9999987888999999999999999999999999999 999999999999999999986 79999974 4569999
Q ss_pred cC-CCcEEEec-cCCCCcceEEEEEEEeeCC-CCCceeEEEEEEEEeCCcccC
Q psy4697 194 ND-SGHISIVD-LSALNTSTIQLVVVATDTG-NPPRQASVPAIMHFPEAIVQQ 243 (383)
Q Consensus 194 ~~-tG~i~l~~-~~~~~~~~y~L~V~a~D~g-~p~~sst~tv~I~v~~~~~~~ 243 (383)
++ +|.|++.+ ++++....|.|.|.|+|+| .|+++++++|.|.| .+.|++
T Consensus 158 d~~tG~i~~~~~LD~E~~~~y~l~V~a~D~g~~~~~s~~~~v~I~V-~DvND~ 209 (210)
T 3mvs_A 158 DSARGIVTVIQELDYEVTQAYQLTVNATDQDKTRPLSTLANLAIII-TDMQDM 209 (210)
T ss_dssp CTTTCEEEECSCCCTTTCSEEEEEEEEEECCSSSCCEEEEEEEEEE-ECCCCC
T ss_pred eCCcEEEEECCcCCCcccceEEEEEEEEECCCCCCCEEEEEEEEEE-EccCCC
Confidence 97 99999866 4788899999999999998 57899999999999 666654
No 14
>2x2u_A Proto-oncogene tyrosine-protein kinase receptor RET; hirschsprung disease, extracellular domain, disease mutation, transferase, glycoprotein; HET: NAG SO4; 2.00A {Homo sapiens}
Probab=100.00 E-value=3.2e-36 Score=280.48 Aligned_cols=200 Identities=17% Similarity=0.070 Sum_probs=175.9
Q ss_pred eeecCcEEEEEECCCCCCcEEEEEEeEeCCCC-eeEEEEe----------cCCCCCEEEcC-cccEEEcccCCcccCcEE
Q psy4697 44 QFSKNEYSVSALENLPVNYVLLTVTTNKPRDL-RVKYWLS----------NDYGERFSISR-QGDISLMQCLDYETEDSY 111 (383)
Q Consensus 44 ~F~~~~y~~~V~En~~~gt~v~~v~A~D~D~~-~v~Ysi~----------~~~~~~F~Id~-tG~I~~~~~LD~E~~~~y 111 (383)
+|.+..|.++|+||.++|+.|++|.|+|+|.+ .+.|+|. .....+|.|++ +|.|++.++||||....|
T Consensus 2 ~F~~~~Y~~~V~E~~~~Gt~v~~v~A~D~D~g~~~~~~i~~~~~~~y~i~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y 81 (246)
T 2x2u_A 2 YFSRDAYWEKLYVDQAAGTPLLYVHALRDAPEEVPSFRLGQHLYGTYRTRLHENNWIRIQEDTGLLYLQRSLDHSSWEKL 81 (246)
T ss_dssp EESCSEEEEEEETTBCTTCEEEECCEECSSTTCCCCCEECSEEECGGGCEEEECCSEEECTTTCEEEESSCBCHHHHHHH
T ss_pred CccCCceEEEeeCCCCCCCEEEEEEEEcCCCCCcceEEEeeccccceeccCCCCCEEEECCCcEEEEECCcCChhHhhhh
Confidence 69999999999999999999999999999973 4555554 23457899996 999999999999999999
Q ss_pred ------------EEEEEEecCC-----ceeEEEEEEEEeecCCCCCc----------ccCCceeEEEeccCCCCCCCCce
Q psy4697 112 ------------RFTVYATDTL-----MTTSATVNISVVNVNDWDPR----------FRYPQYELFLPHIPLADLTPGSV 164 (383)
Q Consensus 112 ------------~~~V~A~D~~-----~~s~~tV~I~V~DvNDn~P~----------f~~~~~~~~v~~~~~e~~~~g~~ 164 (383)
.|+|.|+|++ ++++++|.|+|.|+|||+|+ |..+.|.+.|+ |+.++|+.
T Consensus 82 ~~~~~G~p~~~~~l~V~a~D~g~~~~~~~~~~~v~I~V~DvNDn~P~~~~~~~~~~~F~~~~y~~~v~----En~~~Gt~ 157 (246)
T 2x2u_A 82 SVRNRGFPLLTVYLKVFLSPTSLREGECQWPGCARVYFSFFNTSFPACSSLKPRELCFPETRPSFRIR----ENRPPGTF 157 (246)
T ss_dssp HHTSTTSCCCEEEEEEECC-------CCCTTTEEEEEEEEESSCCCCGGGCCHHHHHSCSSCCCEEEE----BTSCCCEE
T ss_pred ccccCCCcccceEEEEEEEcCCCCCCcccceEEEEEEEEECCCCCCccccccccccccCCCcEEEEEE----CCCCCCcE
Confidence 9999999975 46789999999999999999 99999999999 99999999
Q ss_pred EEEEEeeeCCCCC--eEEEEEeCCCCCCEEEcC-CCcEEEec-cCCCCcceEEEEEEEee-CCCCCceeEEEEEEEEeCC
Q psy4697 165 IGKVEAADGDKGD--RVTLSLRGPYEKMFSIND-SGHISIVD-LSALNTSTIQLVVVATD-TGNPPRQASVPAIMHFPEA 239 (383)
Q Consensus 165 v~~v~A~D~D~g~--~i~ysi~~~~~~~F~i~~-tG~i~l~~-~~~~~~~~y~L~V~a~D-~g~p~~sst~tv~I~v~~~ 239 (383)
|+++.|+|+|.|. .++|+|.+....+|.|++ +|.|++.+ ++++....|.|.|.|+| .|.|+++++++|.|.| .+
T Consensus 158 v~~v~A~D~D~g~n~~i~Y~i~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~V~A~d~dg~p~~ss~~~v~I~V-~D 236 (246)
T 2x2u_A 158 HQFRLLPVQFLCPQISVAYRLLEGEGLPFRSAPDSLEVSTRWALDREQREKYELVAVCTVHAGAREEVVMVPFPVTV-YD 236 (246)
T ss_dssp EECSCHHHHHHCTTSCEEEEEESCTTSSEECCTTCCEEEESSCBCTTTCSEEEEEEEEEEC---CCEEEEEEEEEEE-EC
T ss_pred EEEEEEEcCCCCCCcEEEEEEccCCCCCEEEECCcCEEEeCCccCccccceEEEEEEEEecCCCCcceEEEEEEEEE-EE
Confidence 9999999999986 699999865578999998 99999876 48888999999999998 6779999999999999 88
Q ss_pred cccCccccc
Q psy4697 240 IVQQASSKL 248 (383)
Q Consensus 240 ~~~~~p~~~ 248 (383)
.|+++|.|.
T Consensus 237 vNDn~P~F~ 245 (246)
T 2x2u_A 237 EDDSAPEFE 245 (246)
T ss_dssp SSCCSCCCC
T ss_pred eCCCCCccC
Confidence 999999874
No 15
>2a4e_A Cadherin-11; dimer, calcium binding, cell adhesion; 3.20A {Mus musculus}
Probab=100.00 E-value=2.7e-33 Score=255.57 Aligned_cols=190 Identities=21% Similarity=0.308 Sum_probs=165.0
Q ss_pred cEEEEEECCC--CCCcEEEEEEeEeCCC--CeeEEEEecCC-CCCEEEcC-cccEEEcccCCcccCcEEEEEEEEecCC-
Q psy4697 49 EYSVSALENL--PVNYVLLTVTTNKPRD--LRVKYWLSNDY-GERFSISR-QGDISLMQCLDYETEDSYRFTVYATDTL- 121 (383)
Q Consensus 49 ~y~~~V~En~--~~gt~v~~v~A~D~D~--~~v~Ysi~~~~-~~~F~Id~-tG~I~~~~~LD~E~~~~y~~~V~A~D~~- 121 (383)
.|.++|.||. |.|+.|+++ |+|+|. +.++|+|.+.. ..+|.|++ +|.|++.++||||....|.|+|.|+|++
T Consensus 5 ~~~~~v~En~~~p~~~~v~~v-a~D~D~gn~~i~Y~l~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~a~D~~~ 83 (215)
T 2a4e_A 5 WNQFFVIEEYTGPDPVLVGRL-HSDIDSGDGNIKYILSGEGAGTIFVIDDKSGNIHATKTLDREERAQYTLMAQAVDRDT 83 (215)
T ss_dssp CCEEEEETTCCSSSCEEEEEC-CCTTCCSSSCEEEEEEETTBTTTEEECTTTCEEEECSCCCTTTCSEEEEEEEEEETTT
T ss_pred EeeEEEeccCCCCCCEEEEEE-EECCCCCCCeEEEEEECCCCCCeEEEECCceEEEECCccCCccCCEEEEEEEEEECCC
Confidence 4688999994 679999988 899996 78999998753 46899997 9999999999999999999999999975
Q ss_pred ---ceeEEEEEEEEeecCCCCCcccCCceeEEEeccCCCCCCCCceEEEEEeeeCCC---CC--eEEEEEeCCCCCCEEE
Q psy4697 122 ---MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDK---GD--RVTLSLRGPYEKMFSI 193 (383)
Q Consensus 122 ---~~s~~tV~I~V~DvNDn~P~f~~~~~~~~v~~~~~e~~~~g~~v~~v~A~D~D~---g~--~i~ysi~~~~~~~F~i 193 (383)
+++.++|.|+|.|+|||+|.|..+.|.+.++ |+.++|+.|+++.|+|+|. |. .++|+|.+. +..|.|
T Consensus 84 ~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~----E~~~~Gt~v~~v~A~D~D~~~~G~n~~i~Y~i~~~-~~~F~I 158 (215)
T 2a4e_A 84 NRPLEPPSEFIVKVQDINDNPPEFLHEIYHANVP----ERSNVGTSVIQVTASDADDPTYGNSAKLVYSILEG-QPYFSV 158 (215)
T ss_dssp CCEEEEEEEEEEEEECCCCCCCEESSSSEEEEEE----TTCCTTCEEEECCEECSSCTTTCSSSCCEEEEEES-TTTEEE
T ss_pred CCcccccEEEEEEEeeCCCCCCCccCCceEEEEE----CCCCCCCEEEEEEEEECCCCCCCCceEEEEEEeCC-CCcEEE
Confidence 5778999999999999999999999999999 9999999999999999997 65 699999743 368999
Q ss_pred cC-CCcEEEe-c-cCCCCcceEEEEEEEeeCCCC--CceeEEEEEEEEeCCcccCcc
Q psy4697 194 ND-SGHISIV-D-LSALNTSTIQLVVVATDTGNP--PRQASVPAIMHFPEAIVQQAS 245 (383)
Q Consensus 194 ~~-tG~i~l~-~-~~~~~~~~y~L~V~a~D~g~p--~~sst~tv~I~v~~~~~~~~p 245 (383)
++ +|.|++. + ++++....|.|.|.|+|+|.| +++++++|+|.| .+.|+++|
T Consensus 159 d~~tG~I~~~~~~LD~E~~~~y~l~V~A~D~g~~~~~~s~~~~v~I~V-~DvNDn~P 214 (215)
T 2a4e_A 159 EAQTGIIRTALPNMDREAKEEYHVVIQAKDMGGHMGGLSGTTKVTITL-TDDYKDDD 214 (215)
T ss_dssp CTTTCEEEECSSCCCSSSCSEEEEEEEEETTTTCTTCCEEEEEEEEEE-EC------
T ss_pred eCCccEEEEcccCCCcccCCEEEEEEEEEECCCCCCCceeEEEEEEEE-EECCCCCC
Confidence 98 9999987 4 578888999999999999987 689999999999 77888776
No 16
>3qrb_A Cadherin-1; cell adhesion; HET: PGE; 1.80A {Mus musculus} PDB: 1ff5_A 3lng_A 2qvf_B 1edh_A 3lne_A 1q1p_A 3lni_A 3q2l_A* 3q2n_A* 3lnh_A 3lnf_A 2o72_A 1suh_A
Probab=100.00 E-value=1.5e-32 Score=250.22 Aligned_cols=183 Identities=24% Similarity=0.310 Sum_probs=164.6
Q ss_pred EEEEEECCCC--CCcEEEEEEeEeCCC-CeeEEEEec-----CCCCCEEEcC-cccEEEcccCCcccCcEEEEEEEEecC
Q psy4697 50 YSVSALENLP--VNYVLLTVTTNKPRD-LRVKYWLSN-----DYGERFSISR-QGDISLMQCLDYETEDSYRFTVYATDT 120 (383)
Q Consensus 50 y~~~V~En~~--~gt~v~~v~A~D~D~-~~v~Ysi~~-----~~~~~F~Id~-tG~I~~~~~LD~E~~~~y~~~V~A~D~ 120 (383)
..++|+||.+ .|+.|+++.| |+|. +.++|+|.+ ++.++|.|++ +|.|++.++||||....|.|.|.|+|+
T Consensus 5 ~~~~V~En~~~~~~~~v~~v~a-D~d~n~~v~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~a~D~ 83 (213)
T 3qrb_A 5 AAISCPENEKGEFPKNLVQIKS-NRDKETKVFYSITGQGADKPPVGVFIIERETGWLKVTQPLDREAIAKYILYSHAVSS 83 (213)
T ss_dssp EEEEEETTCCSSSSEEEEECCC-GGGGTSCEEEEEESBTTTBSSTTSEEECTTTCEEEECSCCCTTTCSEEEEEEEEEET
T ss_pred CCEEEeCCCCCCCCcEEEEEEE-CCCCCceEEEEEEcCCCCCCCCCeEEEECCCCEEEECCccCcccCceEEEEEEEEeC
Confidence 3689999998 6788999999 8775 899999987 2345899997 999999999999999999999999996
Q ss_pred C---ceeEEEEEEEEeecCCCCCcccCCceeEEEeccCCCCCCCCceEEEEEeeeCCCC---C--eEEEEEeC-C----C
Q psy4697 121 L---MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKG---D--RVTLSLRG-P----Y 187 (383)
Q Consensus 121 ~---~~s~~tV~I~V~DvNDn~P~f~~~~~~~~v~~~~~e~~~~g~~v~~v~A~D~D~g---~--~i~ysi~~-~----~ 187 (383)
+ ++++++|.|+|.|+|||+|.|..+.|.+.|+ |+.++|+.|+++.|+|+|.| . .++|+|.+ + .
T Consensus 84 ~~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~----En~~~gt~v~~v~A~D~D~~~~~~n~~i~Y~i~~~~~~~~~ 159 (213)
T 3qrb_A 84 NGEAVEDPMEIVITVTDQNDNRPEFTQEVFEGSVA----EGAVPGTSVMKVSATDADDDVNTYNAAIAYTIVSQDPELPH 159 (213)
T ss_dssp TSCBCSCCEEEEEEEECCSCCCCEESCSEEEEEEE----TTCCTTCEEEECCEECCSCTTTSSTTCCEEEEEEEESCCSC
T ss_pred CCCcccceEEEEEEEEEccCCCCccCCCceEEEEE----CCCCCCcEEEEEEEEeCCCCCCCcCcEEEEEEccCCCCCCc
Confidence 5 6788999999999999999999999999999 99999999999999999998 3 69999963 2 4
Q ss_pred CCCEEEcC-CCcEEEe-c-cCCCCcceEEEEEEEeeCCCCCceeEEEEEEEEe
Q psy4697 188 EKMFSIND-SGHISIV-D-LSALNTSTIQLVVVATDTGNPPRQASVPAIMHFP 237 (383)
Q Consensus 188 ~~~F~i~~-tG~i~l~-~-~~~~~~~~y~L~V~a~D~g~p~~sst~tv~I~v~ 237 (383)
...|.|++ +|.|++. . ++++....|.|.|.|+|+|.|+++++++|+|.|.
T Consensus 160 ~~~F~Id~~tG~i~~~~~~LD~E~~~~y~l~V~A~D~g~~~~s~t~~v~I~V~ 212 (213)
T 3qrb_A 160 KNMFTVNRDTGVISVLTSGLDRESYPTYTLVVQAADLQGEGLSTTAKAVITVK 212 (213)
T ss_dssp SCSEEECTTTCEEEECSSCCCTTTCCEEEEEEEEETGGGTSCEEEEEEEEEEE
T ss_pred CCeEEEECCCcEEEEccCCCCCccCceEEEEEEEEeCCCCCceEEEEEEEEEE
Confidence 56899997 9999885 3 5888899999999999999999999999999984
No 17
>3k5r_A Cadherin 13; mouse, structural protein; 2.00A {Mus musculus} PDB: 3k5s_A
Probab=100.00 E-value=1.9e-32 Score=250.49 Aligned_cols=182 Identities=23% Similarity=0.306 Sum_probs=163.2
Q ss_pred EEEEECCCCCC--cEEEEEEeEeCCCCeeEEEEec-----CCCCCEEEcC-cccEEEcccCCcccCcEEEEEEEEecCC-
Q psy4697 51 SVSALENLPVN--YVLLTVTTNKPRDLRVKYWLSN-----DYGERFSISR-QGDISLMQCLDYETEDSYRFTVYATDTL- 121 (383)
Q Consensus 51 ~~~V~En~~~g--t~v~~v~A~D~D~~~v~Ysi~~-----~~~~~F~Id~-tG~I~~~~~LD~E~~~~y~~~V~A~D~~- 121 (383)
.++|+||.++| ..++++.|.|+|. .++|+|.+ +..++|.|++ +|.|++.++||||....|.|+|.|+|++
T Consensus 7 ~~~V~En~~~g~~~~v~~v~a~D~d~-~i~Y~i~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~a~D~g~ 85 (218)
T 3k5r_A 7 PILIPENQRQPFPRDVGKVVDSDRPE-GSKFRLTGKGVDQDPKGTFRINENTGSVSVTRTLDRETIATYQLYVETTDASG 85 (218)
T ss_dssp CEEEETTCCSSCCEEEEECBCTTCCT-TCEEEEEEBTTTBSSTTSEEECTTTCEEEECSCCCTTTCSEEEEEEEEECSSS
T ss_pred cEEEecCCCCCCCEEEEEEEecCCCc-eEEEEEEcCCCCCCCCCeEEEeCCceEEEECCcCCcccCCEEEEEEEEEECCC
Confidence 58999999998 8899999999886 89999975 3457999997 9999999999999999999999999976
Q ss_pred --ceeEEEEEEEEeecCCCCCcccCCceeEEEeccCCCCCCCCceEEEEEeeeCCC--CC--eEEEEEeCC-C----CCC
Q psy4697 122 --MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDK--GD--RVTLSLRGP-Y----EKM 190 (383)
Q Consensus 122 --~~s~~tV~I~V~DvNDn~P~f~~~~~~~~v~~~~~e~~~~g~~v~~v~A~D~D~--g~--~i~ysi~~~-~----~~~ 190 (383)
++++++|.|+|.|+|||+|.|..+.|.+.|+ |+.++|+.|++|.|+|+|. |. .++|+|.+. . .++
T Consensus 86 ~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~----E~~~~gt~v~~v~A~D~D~~~g~n~~i~Y~i~~~~~~~~~~~~ 161 (218)
T 3k5r_A 86 KTLEGPVPLEVIVIDQNDNRPIFREGPYIGHVM----EGSPTGTTVMRMTAFDADDPATDNALLRYNIRQQTPDKPSPNM 161 (218)
T ss_dssp CEEEEEEEEEEEEECTTCCCCCCCSCSEEEEEE----TTCCTTCEEEECCCSCSSSSCGGGGCEEEEEEEEESCCSCSCS
T ss_pred CceeeeEEEEEEEEeCCCCCCcccCCceEEEEE----CCCCCCCEEEEEEEEeCCCCCCCCcEEEEEEecCCCCCCcCCE
Confidence 6788999999999999999999999999999 9999999999999999998 43 699999732 2 267
Q ss_pred EEEcC-CCcEEEe----ccCCCC--cceEEEEEEEeeCC--CCCceeEEEEEEEEe
Q psy4697 191 FSIND-SGHISIV----DLSALN--TSTIQLVVVATDTG--NPPRQASVPAIMHFP 237 (383)
Q Consensus 191 F~i~~-tG~i~l~----~~~~~~--~~~y~L~V~a~D~g--~p~~sst~tv~I~v~ 237 (383)
|.|++ +|.|++. .++++. ...|.|.|.|+|+| .|+++++++|+|+|.
T Consensus 162 F~Id~~tG~i~~~~~~~~LD~E~~~~~~y~l~V~a~D~gg~~p~~sst~~v~I~V~ 217 (218)
T 3k5r_A 162 FYIDPEKGDIVTVVSPALLDRETLENPKYELIIEAQDMAGLDVGLTGTATATIVID 217 (218)
T ss_dssp EEECTTTCEEEECSCGGGCCGGGCSCSEEEEEEEEEECSSTTTTCEEEEEEEEEEE
T ss_pred EEEECCccEEEEeccCCCCCccccCCCeEEEEEEEEECCCCCCCeeEEEEEEEEEE
Confidence 99997 9999875 357777 66999999999999 899999999999984
No 18
>2qvi_A Cadherin-2; beta barrel, strand SWAP, domain SWAP, calcium, cell adhesion, cleavage on PAIR of basic residues, glycoprotein, membrane; 3.01A {Mus musculus} SCOP: b.1.6.1 b.1.6.1 PDB: 1ncj_A
Probab=100.00 E-value=4.8e-32 Score=247.30 Aligned_cols=182 Identities=21% Similarity=0.307 Sum_probs=162.8
Q ss_pred EEEEECCCCCCcEEEEEEeEeCCC---CeeEEEEecC-----CCCCEEEcC-cccEEEcccCCcccCcEEEEEEEEecCC
Q psy4697 51 SVSALENLPVNYVLLTVTTNKPRD---LRVKYWLSND-----YGERFSISR-QGDISLMQCLDYETEDSYRFTVYATDTL 121 (383)
Q Consensus 51 ~~~V~En~~~gt~v~~v~A~D~D~---~~v~Ysi~~~-----~~~~F~Id~-tG~I~~~~~LD~E~~~~y~~~V~A~D~~ 121 (383)
.++|+||.+ |+.++++.|.|.|. +.++|+|.+. ..++|.|++ +|.|++.++||||....|.|+|.|+|++
T Consensus 6 ~~~V~En~~-g~~~~~v~~~~~D~~~n~~v~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~a~D~g 84 (215)
T 2qvi_A 6 PINLPENSR-GPFPQELVRIRSDRDKNLSLRYSVTGPGADQPPTGIFIINPISGQLSVTKPLDRELIARFHLRAHAVDIN 84 (215)
T ss_dssp CEEEESSCC-CCSSEEEEECCCGGGGTSCEEEEEESTTSSSTTCSSEEECTTTCEEEECSCCCTTTCSEEEEEEEEEETT
T ss_pred cEEEcCCCC-CCCCEEEEEEeCCCCCCceEEEEEECCCCCCCCCCcEEEeCCccEEEECcccCcccCCeEEEEEEEEECC
Confidence 579999998 88888888877764 8999999873 357899996 9999999999999999999999999976
Q ss_pred ---ceeEEEEEEEEeecCCCCCcccCCceeEEEeccCCCCCCCCceEEEEEeeeCCC--CC--eEEEEEeC-C----CCC
Q psy4697 122 ---MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDK--GD--RVTLSLRG-P----YEK 189 (383)
Q Consensus 122 ---~~s~~tV~I~V~DvNDn~P~f~~~~~~~~v~~~~~e~~~~g~~v~~v~A~D~D~--g~--~i~ysi~~-~----~~~ 189 (383)
++++++|.|+|.|+|||+|.|..+.|.+.++ |+.++|+.|+++.|+|+|. |. .++|+|.+ + ...
T Consensus 85 ~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~----En~~~gt~v~~v~A~D~D~~~g~n~~i~Y~i~~~~~~~~~~~ 160 (215)
T 2qvi_A 85 GNQVENPIDIVINVIDMNDNRPEFLHQVWNGSVP----EGSKPGTYVMTVTAIDADDPNALNGMLRYRILSQAPSTPSPN 160 (215)
T ss_dssp TCCCEEEEEEEEEEECCCCCCCBCSSSEEEEEEC----SSCCTTCEEEECCCBCSSCTTSTTTCCCCEEEECSSCCSSTT
T ss_pred CCceeeeEEEEEEEeECCCCCCcccCceeEEEEe----CCCCCCCEEEEEEEEeCCCCCCCCcEEEEEEecCCCCCCcCC
Confidence 6789999999999999999999999999999 9999999999999999998 43 69999973 3 357
Q ss_pred CEEEcC-CCcEEEe--ccCCCCcceEEEEEEEeeCCCC---CceeEEEEEEEEe
Q psy4697 190 MFSIND-SGHISIV--DLSALNTSTIQLVVVATDTGNP---PRQASVPAIMHFP 237 (383)
Q Consensus 190 ~F~i~~-tG~i~l~--~~~~~~~~~y~L~V~a~D~g~p---~~sst~tv~I~v~ 237 (383)
.|.|++ +|.|++. .++++....|.|.|.|+|+|.| +++++++|+|.|.
T Consensus 161 ~F~Id~~tG~i~~~~~~LD~E~~~~y~l~V~a~D~g~~p~~~ls~t~~v~I~V~ 214 (215)
T 2qvi_A 161 MFTINNETGDIITVAAGLDREKVQQYTLIIQATDMEGNPTYGLSNTATAVITVT 214 (215)
T ss_dssp CEEECTTTCEEEECSCCCCTTTCSEEEEEEECCTTTTCTTTSCCCEEEEEEEEC
T ss_pred eEEEcCCCcEEEEecCCCCcccCCeEEEEEEEEECCCCCCCCcceEEEEEEEEE
Confidence 999998 9999984 3578888999999999999888 7999999999984
No 19
>3ppe_A Vascular endothelial cadherin; extracellular cadherin (EC) domain, beta barrel, IG-domain L domain swapped dimer interface; 2.10A {Gallus gallus}
Probab=100.00 E-value=1.6e-31 Score=241.82 Aligned_cols=182 Identities=22% Similarity=0.316 Sum_probs=163.4
Q ss_pred EEEEEECCCCCC--cEEEEEEeEeCCCCeeEEEEecC-CCCCEEEcC-cccEEEcccCCcccCcEEEEEEEEecCC----
Q psy4697 50 YSVSALENLPVN--YVLLTVTTNKPRDLRVKYWLSND-YGERFSISR-QGDISLMQCLDYETEDSYRFTVYATDTL---- 121 (383)
Q Consensus 50 y~~~V~En~~~g--t~v~~v~A~D~D~~~v~Ysi~~~-~~~~F~Id~-tG~I~~~~~LD~E~~~~y~~~V~A~D~~---- 121 (383)
..++|+||.+.| ..++++. +|+|.+.-+|+|.+. ..++|.|++ +|.|++.++||||....|.|+|.|+|++
T Consensus 5 ~~~~V~En~~~~~~~~v~~v~-~D~D~g~~~Y~i~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~a~D~g~~~~ 83 (203)
T 3ppe_A 5 NRMHIREEIDSPLPHHVGKLT-SSVGNKNAMYIIEGESANTIFKVQGYDGDIYAFERLDREKKAEYELTAHIIDRRNNRS 83 (203)
T ss_dssp SEEEEETTCCSSSCEEEEECC-BCCCCTTEEEEEEETTBTTTEEEETTTTEEEESSCCCTTTCCEEEEEEEEEETTTTEE
T ss_pred ccEEEEccCCCCCCEEEEEEE-ecCCCCCcEEEEecCCCCCeEEEECCcCEEEECccccccccceEEEEEEEEECCCCCc
Confidence 468999999988 8899998 899985459999874 456999997 8999999999999999999999999975
Q ss_pred ceeEEEEEEEEeecCCCCCcccCCceeEEEeccCCCCCCCCceEEEEEeeeCCC---CC--eEEEEEeCCCCCCEEEcCC
Q psy4697 122 MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDK---GD--RVTLSLRGPYEKMFSINDS 196 (383)
Q Consensus 122 ~~s~~tV~I~V~DvNDn~P~f~~~~~~~~v~~~~~e~~~~g~~v~~v~A~D~D~---g~--~i~ysi~~~~~~~F~i~~t 196 (383)
+++.++|.|+|.|+|||+|.|..+.|.+.|+ |+.++|+.|+++.|+|+|. |. .++|+|.+. +..|.|+.+
T Consensus 84 ~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~----E~~~~gt~v~~v~A~D~D~~~~g~n~~i~Y~i~~~-~~~F~I~~t 158 (203)
T 3ppe_A 84 LEPPSKFIIKVSDINDNAPIFVQKIFNGSVP----EMSRLGTSVTKVTAEDADDPTVAGHATVTYQIIKG-NEYFTVDDS 158 (203)
T ss_dssp CSCCEEEEEEEECCCCCCCEESCSEEEEEEE----TTCCTTCEEEECCEECCSCTTSSSTTCEEEEEEES-TTTEEECTT
T ss_pred ccceEEEEEEEcCCCCCCCCccCCccEEEEe----ccCCCCcEEEEEEEEcCCCcCCCCceEEEEEEeCC-CCcEEEeCC
Confidence 5788999999999999999999999999999 9999999999999999994 54 699999843 359999999
Q ss_pred CcEEEe-c-cCCCCcceEEEEEEEeeC-CCCCceeEEEEEEEEe
Q psy4697 197 GHISIV-D-LSALNTSTIQLVVVATDT-GNPPRQASVPAIMHFP 237 (383)
Q Consensus 197 G~i~l~-~-~~~~~~~~y~L~V~a~D~-g~p~~sst~tv~I~v~ 237 (383)
|.|++. . ++++....|.|.|.|+|+ |.|+++++++|.|+|.
T Consensus 159 G~i~~~~~~LD~E~~~~y~l~V~A~D~~G~p~~s~t~~v~I~V~ 202 (203)
T 3ppe_A 159 GVIFTARADLDRESQSAYEIIVKAKDALGLTGESSTATVIIRLT 202 (203)
T ss_dssp SEEEESCSCCCTTTCSEEEEEEEEEETTCCCCSSSEEEEEEEEE
T ss_pred eEEEECCcCCCcccCCEEEEEEEEEeCCCCCCCeEEEEEEEEEE
Confidence 999986 4 478889999999999998 8899999999999984
No 20
>3lnd_A CDH6 protein, cadherin 6; cell adhesion, cell membrane, membrane, transmembr; 2.82A {Mus musculus}
Probab=99.98 E-value=6e-32 Score=245.24 Aligned_cols=181 Identities=24% Similarity=0.335 Sum_probs=156.0
Q ss_pred EEEEECCCCCCc--EEEEEEeEeCCC--CeeEEEEecCC-CCCEEEcC-cccEEEcccCCcccCcEEEEEEEEecCC---
Q psy4697 51 SVSALENLPVNY--VLLTVTTNKPRD--LRVKYWLSNDY-GERFSISR-QGDISLMQCLDYETEDSYRFTVYATDTL--- 121 (383)
Q Consensus 51 ~~~V~En~~~gt--~v~~v~A~D~D~--~~v~Ysi~~~~-~~~F~Id~-tG~I~~~~~LD~E~~~~y~~~V~A~D~~--- 121 (383)
.++|+||.+++. .++.+ |+|+|. +.++|+|.+.. ..+|.|++ +|.|++.++||||....|.|+|.|+|++
T Consensus 6 ~~~v~En~~~~~~~~v~~~-a~D~D~g~~~i~Y~l~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~a~D~~~~~ 84 (207)
T 3lnd_A 6 QFFLLEEYTGSDYQYVGKL-HSDQDRGDGSLKYILSGDGAGDLFIINENTGDIQATKRLDREEKPVYILRAQAVNRRTGR 84 (207)
T ss_dssp CEEEESCBCSSSCEEEEEC-CCTTCCSSTTBCCCCCSSSBTTTEEECTTTCEEEECSCCCGGGCCEEEC----CBSSSCC
T ss_pred ccEEEeecCCCCCEEEEEE-EeCCCCCCceEEEEEECCCCCCeEEEECCceEEEECCCcCcccCCEEEEEEEEEECCCCC
Confidence 478999988664 88888 999995 78999998743 45899997 9999999999999999999999999964
Q ss_pred -ceeEEEEEEEEeecCCCCCcccCCceeEEEeccCCCCCCCCceEEEEEeeeCCC---CC--eEEEEEeCCCCCCEEEcC
Q psy4697 122 -MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDK---GD--RVTLSLRGPYEKMFSIND 195 (383)
Q Consensus 122 -~~s~~tV~I~V~DvNDn~P~f~~~~~~~~v~~~~~e~~~~g~~v~~v~A~D~D~---g~--~i~ysi~~~~~~~F~i~~ 195 (383)
++++++|.|+|.|+|||+|.|..+.|.+.|+ |+.++|+.|+++.|+|+|. |. .++|+|.+. +..|.|++
T Consensus 85 ~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~----E~~~~gt~v~~v~A~D~D~~~~g~n~~i~Y~i~~~-~~~F~Id~ 159 (207)
T 3lnd_A 85 PVEPESEFIIKIHDINDNEPIFTKDVYTATVP----EMADVGTFVVQVTATDADDPTYGNSAKVVYSILQG-QPYFSVES 159 (207)
T ss_dssp CCSCCCCCEEEEECCSCCCCEESCSEEEEEEE----SSCCTTCEEEECCEECSSCTTSSSTTCCEEEEEES-GGGEEECT
T ss_pred ccccEEEEEEEECccCCCCCccCCCceEEEEe----CCCCCCCEEEEEEEEeCCCCCCCCCcEEEEEEcCC-CCCEEEcC
Confidence 6788999999999999999999999999999 9999999999999999997 65 699999843 45899997
Q ss_pred -CCcEEEe-c-cCCCCcceEEEEEEEeeCCCC--CceeEEEEEEEEe
Q psy4697 196 -SGHISIV-D-LSALNTSTIQLVVVATDTGNP--PRQASVPAIMHFP 237 (383)
Q Consensus 196 -tG~i~l~-~-~~~~~~~~y~L~V~a~D~g~p--~~sst~tv~I~v~ 237 (383)
+|.|++. . ++++....|.|.|.|+|+|.| +++++++|+|+|.
T Consensus 160 ~tG~i~~~~~~lD~E~~~~y~l~V~A~D~g~~~~~~s~t~~v~I~V~ 206 (207)
T 3lnd_A 160 ETGIIKTALLNMDRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLT 206 (207)
T ss_dssp TTCEEEECCSSCCC--CCEEEEEEEEESGGGCTTCBEEEEEEEEEEE
T ss_pred CCcEEEECcccCCcccCCEEEEEEEEEECCCCCCCcEeEEEEEEEEe
Confidence 9999987 4 477888999999999999987 8999999999984
No 21
>2a62_A Cadherin-8; extracellular domain, homodimer, calcium binding, adhesion; 4.50A {Mus musculus}
Probab=99.97 E-value=1.5e-30 Score=251.28 Aligned_cols=195 Identities=23% Similarity=0.323 Sum_probs=173.1
Q ss_pred EEEEEECC--CCCCcEEEEEEeEeCCC--CeeEEEEecC-CCCCEEEcC-cccEEEcccCCcccCcEEEEEEEEecCC--
Q psy4697 50 YSVSALEN--LPVNYVLLTVTTNKPRD--LRVKYWLSND-YGERFSISR-QGDISLMQCLDYETEDSYRFTVYATDTL-- 121 (383)
Q Consensus 50 y~~~V~En--~~~gt~v~~v~A~D~D~--~~v~Ysi~~~-~~~~F~Id~-tG~I~~~~~LD~E~~~~y~~~V~A~D~~-- 121 (383)
+.++|.|| .+.|+.|+++. +|+|. +.++|+|.+. ...+|.|++ +|.|++.++||||....|.|+|+|+|++
T Consensus 5 ~~~~v~E~~~~~~~~~v~~va-~D~D~g~~~i~Y~l~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~a~D~~~~ 83 (322)
T 2a62_A 5 NQMFVLEEFSGPEPILVGRLH-TDLDPGSKKIKYILSGDGAGTIFQINDITGDIHAIKRLDREEKAEYTLTAQAVDFETN 83 (322)
T ss_dssp CCEECCCSCCCSSCEECCCCC-CCCCCSSCCCEEEEEETTBTTTEEEETTTTEEEECSCCCTTTCSBCCEEEEEECTTTC
T ss_pred ceeeeccccCCCCCEEEEEEE-EcCCCCCCEEEEEEECCCCCCcEEEeCCcCEEEEeccCCcccccEEEEEEEEEECCCC
Confidence 46788999 88999999985 89985 7899999874 346899996 9999999999999999999999999964
Q ss_pred --ceeEEEEEEEEeecCCCCCcccCCceeEEEeccCCCCCCCCceEEEEEeeeCCC---CC--eEEEEEeCCCCCCEEEc
Q psy4697 122 --MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDK---GD--RVTLSLRGPYEKMFSIN 194 (383)
Q Consensus 122 --~~s~~tV~I~V~DvNDn~P~f~~~~~~~~v~~~~~e~~~~g~~v~~v~A~D~D~---g~--~i~ysi~~~~~~~F~i~ 194 (383)
+++.++|.|+|.|+|||+|.|..+.|.+.|+ |+.++|+.|+++.|+|+|. |. .++|+|.++ ..+|.|+
T Consensus 84 ~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~----E~~~~gt~v~~v~A~D~D~~~~G~n~~i~Y~i~~~-~~~F~Id 158 (322)
T 2a62_A 84 KPLEPPSEFIIKVQDINDNAPEFLNGPYHATVP----EMSILGTSVTNVTATDADDPVYGNSAKLVYSILEG-QPYFSIE 158 (322)
T ss_dssp SEEEEEEEECEECCCCSCSCBCCSSSEEEEEEC----SSCCTTCBCCCCCCCBCSCSSSTTSSCEEEEEEEC-TTTEEEC
T ss_pred CcccceEEEEEEEEecCCCCCccCCCceEEEEe----CCCCCCCEEEEEEEEeCCCCCCCccEEEEEEEccC-CCCEEEe
Confidence 5678899999999999999999999999999 9999999999999999996 64 699999743 4689999
Q ss_pred C-CCcEEEe-c-cCCCCcceEEEEEEEeeCCCCC--ceeEEEEEEEEeCCcccCcccccCCC
Q psy4697 195 D-SGHISIV-D-LSALNTSTIQLVVVATDTGNPP--RQASVPAIMHFPEAIVQQASSKLNSG 251 (383)
Q Consensus 195 ~-tG~i~l~-~-~~~~~~~~y~L~V~a~D~g~p~--~sst~tv~I~v~~~~~~~~p~~~~~~ 251 (383)
+ +|.|++. . ++++....|.|.|.|+|+|.|+ ++++++|+|.| .+.|+++|.|....
T Consensus 159 ~~tG~i~~~~~~LD~E~~~~y~l~V~a~D~g~p~~~~s~~~~v~I~V-~DvNDn~P~F~~~~ 219 (322)
T 2a62_A 159 PETAIIKTALPNMDREAKEEYLVVIQAKDMGGHSGGLSGTTTLTVTL-TDVNDNPPKFAQSL 219 (322)
T ss_dssp TTTCCEEECSSCCCGGGCSEEEEEEEEEESCSSSSCCBCCEEEEEEE-CCCCCCCCCCSCSE
T ss_pred cCCCEEEecccCCCcccCCeEEEEEEEEECCCCCCCceeEEEEEEEE-EecCCCCCeecCCC
Confidence 7 9999876 4 5778889999999999999885 89999999999 88999999886543
No 22
>2a4e_A Cadherin-11; dimer, calcium binding, cell adhesion; 3.20A {Mus musculus}
Probab=99.96 E-value=5.2e-29 Score=227.13 Aligned_cols=138 Identities=19% Similarity=0.249 Sum_probs=122.0
Q ss_pred CCcCCCCeEEEEEEEEECCC-CCceEEEEEEEEEeeCCCCCCeeecCcEEEEEECCCCCCcEEEEEEeEeCCC------C
Q psy4697 3 NEDDFLQPITLVVRAIQYDN-QDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRD------L 75 (383)
Q Consensus 3 ~DrE~~~~y~l~V~a~D~g~-~~~~s~~~v~V~V~DvNdn~P~F~~~~y~~~V~En~~~gt~v~~v~A~D~D~------~ 75 (383)
.|||..+.|.|+|.|+|.|. +++++.+.|.|.|.|+|||+|.|.+..|.++|+||.++|+.|++|.|+|+|. +
T Consensus 64 LDrE~~~~y~l~v~a~D~~~~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~~~Gt~v~~v~A~D~D~~~~G~n~ 143 (215)
T 2a4e_A 64 LDREERAQYTLMAQAVDRDTNRPLEPPSEFIVKVQDINDNPPEFLHEIYHANVPERSNVGTSVIQVTASDADDPTYGNSA 143 (215)
T ss_dssp CCTTTCSEEEEEEEEEETTTCCEEEEEEEEEEEEECCCCCCCEESSSSEEEEEETTCCTTCEEEECCEECSSCTTTCSSS
T ss_pred cCCccCCEEEEEEEEEECCCCCcccccEEEEEEEeeCCCCCCCccCCceEEEEECCCCCCCEEEEEEEEECCCCCCCCce
Confidence 48999999999999999886 5788999999999999999999999999999999999999999999999993 6
Q ss_pred eeEEEEecCCCCCEEEcC-cccEEEc-ccCCcccCcEEEEEEEEecCC-----ceeEEEEEEEEeecCCCCCc
Q psy4697 76 RVKYWLSNDYGERFSISR-QGDISLM-QCLDYETEDSYRFTVYATDTL-----MTTSATVNISVVNVNDWDPR 141 (383)
Q Consensus 76 ~v~Ysi~~~~~~~F~Id~-tG~I~~~-~~LD~E~~~~y~~~V~A~D~~-----~~s~~tV~I~V~DvNDn~P~ 141 (383)
.++|+|.+.. .+|.|++ +|.|++. +.||||....|.|.|+|+|+| ++++++|+|+|.|+|||+|+
T Consensus 144 ~i~Y~i~~~~-~~F~Id~~tG~I~~~~~~LD~E~~~~y~l~V~A~D~g~~~~~~s~~~~v~I~V~DvNDn~P~ 215 (215)
T 2a4e_A 144 KLVYSILEGQ-PYFSVEAQTGIIRTALPNMDREAKEEYHVVIQAKDMGGHMGGLSGTTKVTITLTDDYKDDDK 215 (215)
T ss_dssp CCEEEEEEST-TTEEECTTTCEEEECSSCCCSSSCSEEEEEEEEETTTTCTTCCEEEEEEEEEEEC-------
T ss_pred EEEEEEeCCC-CcEEEeCCccEEEEcccCCCcccCCEEEEEEEEEECCCCCCCceeEEEEEEEEEECCCCCCC
Confidence 8999998753 5899996 9999999 999999999999999999965 68899999999999999995
No 23
>4apx_B Protocadherin-15, otocadherin; cell adhesion, hearing, deafness, CDH23, PCDH15; HET: MES; 1.65A {Mus musculus} PDB: 4aq8_C 4aqa_B* 4aqe_B* 4axw_B*
Probab=99.95 E-value=1.3e-27 Score=221.54 Aligned_cols=186 Identities=16% Similarity=0.154 Sum_probs=155.0
Q ss_pred CcEEEEEECCCCCCcEEEEEEeEeCC-C---CeeEEEEecCCCCCEEEcC-cccEEEc---ccCCcccCcEEE---EEEE
Q psy4697 48 NEYSVSALENLPVNYVLLTVTTNKPR-D---LRVKYWLSNDYGERFSISR-QGDISLM---QCLDYETEDSYR---FTVY 116 (383)
Q Consensus 48 ~~y~~~V~En~~~gt~v~~v~A~D~D-~---~~v~Ysi~~~~~~~F~Id~-tG~I~~~---~~LD~E~~~~y~---~~V~ 116 (383)
+.|.+.|+|+.++|+.|..+.+.|.+ . +.++|+|.++...+|.|++ +|.+++. +.||||....|. +.+.
T Consensus 20 P~~~vsV~E~sp~GTvv~~~~~~~~~d~~~n~~i~ysl~~~~~~~f~id~~tg~~~l~~t~~~LDrE~~~~~~~~~~~v~ 99 (242)
T 4apx_B 20 PATIVAIDEESRNGTILVDNMLIKGTAGGPDPTIELSLKDNVDYWVLLDPVKQMLFLNSTGRVLDRDPPMNIHSIVVQVQ 99 (242)
T ss_dssp SSEEEEEETTCCTTCEEESCCCBSSCBSSSSCSEEEEEESCGGGCEEEETTTTEEEECCTTSCCCCSTTTCCCEEEEEEE
T ss_pred CeEEEEeeCCCCCCCEEEEEEEecCCCCCCCCEEEEEEecCCCceEEECCCCCEEEEEecCCceeccCCCceEEEEEEEE
Confidence 46789999999999999876554443 2 7899999987777999997 9999874 789999976554 4455
Q ss_pred EecCC--ceeEEEEEEEEeecCCCCCcccCCceeEEEeccCCCCCCCCceEEE-----EEeeeCCCCC--eEEEEEeCCC
Q psy4697 117 ATDTL--MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGK-----VEAADGDKGD--RVTLSLRGPY 187 (383)
Q Consensus 117 A~D~~--~~s~~tV~I~V~DvNDn~P~f~~~~~~~~v~~~~~e~~~~g~~v~~-----v~A~D~D~g~--~i~ysi~~~~ 187 (383)
|.+++ ..+.+.|.|.|.|+|||+|+|..+.|.+.|+ |+.++|+.|.+ +.|+|+|.|. .++|+|.++.
T Consensus 100 ~~~~~~~~~~~~~V~I~V~DvNDn~P~F~~~~y~~~v~----En~~~Gt~v~~~~~~~v~A~D~D~g~N~~v~Ysi~~~~ 175 (242)
T 4apx_B 100 CVNKKVGTVIYHEVRIVVRDRNDNSPTFKHESYYATVN----ELTPVGTTIFTGFSGDNGATDIDDGPNGQIEYVIQYNP 175 (242)
T ss_dssp EEETTTCCEEEEEEEEEEECCCCCCCEESSSCEEEEEE----TTCCTTCEEECTTTTTTSEECCSSGGGGCEEEEEECCT
T ss_pred eECCCCCeEEEEEEEEEEEeCCCCCCcccceeeeeEee----eccCCCCEEEEeeecccccccCCCCcCCceEEEEecCC
Confidence 55543 5667889999999999999999999999999 99999999976 7899999986 6999998432
Q ss_pred -C----CCEEEc-C-CCcEEEecc-CCCCcceEEEEEEEeeCCCCC---ceeEEEEEEEEe
Q psy4697 188 -E----KMFSIN-D-SGHISIVDL-SALNTSTIQLVVVATDTGNPP---RQASVPAIMHFP 237 (383)
Q Consensus 188 -~----~~F~i~-~-tG~i~l~~~-~~~~~~~y~L~V~a~D~g~p~---~sst~tv~I~v~ 237 (383)
. ..|.|+ + +|.|++.+. +++....|.|.|.|+|+|.|+ ++++++|+|+|.
T Consensus 176 ~~~~~~~~F~Id~~~tG~i~~~~~LD~E~~~~y~l~V~A~D~G~~~~~~~~~~~~vtVnVe 236 (242)
T 4apx_B 176 EDPTSNDTFEIPLMLTGNVVLRKRLNYEDKTRYYVIIQANDRAQNLNERRTTTTTLTVDLE 236 (242)
T ss_dssp TSTTHHHHEECSSTTTCCEEECSCCCTTTCCEEEEEEEEEECCSSGGGCCEEEEEEEEEEE
T ss_pred CCcccccceEEcCCCceEEEECCcCChhhCCEEEEEEEEEECCcCchhcccCCceEEEEEe
Confidence 2 359998 5 899998764 788899999999999999985 788999999983
No 24
>2x2u_A Proto-oncogene tyrosine-protein kinase receptor RET; hirschsprung disease, extracellular domain, disease mutation, transferase, glycoprotein; HET: NAG SO4; 2.00A {Homo sapiens}
Probab=99.95 E-value=1.5e-29 Score=235.46 Aligned_cols=141 Identities=16% Similarity=0.063 Sum_probs=126.1
Q ss_pred CCcCCCCeE------------EEEEEEEECCCC--CceEEEEEEEEEeeCCCCCCe----------eecCcEEEEEECCC
Q psy4697 3 NEDDFLQPI------------TLVVRAIQYDNQ--DRYALATLIVSKAGTSLRELQ----------FSKNEYSVSALENL 58 (383)
Q Consensus 3 ~DrE~~~~y------------~l~V~a~D~g~~--~~~s~~~v~V~V~DvNdn~P~----------F~~~~y~~~V~En~ 58 (383)
.|||..+.| .|+|.|+|.|.| +++++++|.|.|.|+|||+|+ |.+..|.+.|+||.
T Consensus 73 LDrE~~~~y~~~~~G~p~~~~~l~V~a~D~g~~~~~~~~~~~v~I~V~DvNDn~P~~~~~~~~~~~F~~~~y~~~v~En~ 152 (246)
T 2x2u_A 73 LDHSSWEKLSVRNRGFPLLTVYLKVFLSPTSLREGECQWPGCARVYFSFFNTSFPACSSLKPRELCFPETRPSFRIRENR 152 (246)
T ss_dssp BCHHHHHHHHHTSTTSCCCEEEEEEECC-------CCCTTTEEEEEEEEESSCCCCGGGCCHHHHHSCSSCCCEEEEBTS
T ss_pred CChhHhhhhccccCCCcccceEEEEEEEcCCCCCCcccceEEEEEEEEECCCCCCccccccccccccCCCcEEEEEECCC
Confidence 488888889 999999999988 688899999999999999999 99999999999999
Q ss_pred CCCcEEEEEEeEeCCC---CeeEEEEecCCCCCEEEcC-cccEEEcccCCcccCcEEEEEEEEec--CC--ceeEEEEEE
Q psy4697 59 PVNYVLLTVTTNKPRD---LRVKYWLSNDYGERFSISR-QGDISLMQCLDYETEDSYRFTVYATD--TL--MTTSATVNI 130 (383)
Q Consensus 59 ~~gt~v~~v~A~D~D~---~~v~Ysi~~~~~~~F~Id~-tG~I~~~~~LD~E~~~~y~~~V~A~D--~~--~~s~~tV~I 130 (383)
++|+.|++|.|+|+|. +.++|+|.+....+|.|++ +|.|++.++||||....|.|+|.|+| ++ ++++++|.|
T Consensus 153 ~~Gt~v~~v~A~D~D~g~n~~i~Y~i~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~V~A~d~dg~p~~ss~~~v~I 232 (246)
T 2x2u_A 153 PPGTFHQFRLLPVQFLCPQISVAYRLLEGEGLPFRSAPDSLEVSTRWALDREQREKYELVAVCTVHAGAREEVVMVPFPV 232 (246)
T ss_dssp CCCEEEECSCHHHHHHCTTSCEEEEEESCTTSSEECCTTCCEEEESSCBCTTTCSEEEEEEEEEEC---CCEEEEEEEEE
T ss_pred CCCcEEEEEEEEcCCCCCCcEEEEEEccCCCCCEEEECCcCEEEeCCccCccccceEEEEEEEEecCCCCcceEEEEEEE
Confidence 9999999999999984 8999999986677999996 99999999999999999999999887 33 789999999
Q ss_pred EEeecCCCCCccc
Q psy4697 131 SVVNVNDWDPRFR 143 (383)
Q Consensus 131 ~V~DvNDn~P~f~ 143 (383)
+|+|+|||+|+|.
T Consensus 233 ~V~DvNDn~P~F~ 245 (246)
T 2x2u_A 233 TVYDEDDSAPEFE 245 (246)
T ss_dssp EEECSSCCSCCCC
T ss_pred EEEEeCCCCCccC
Confidence 9999999999985
No 25
>3ubf_A Neural-cadherin; cell adhesion; 2.50A {Drosophila melanogaster} PDB: 3ubg_A
Probab=99.95 E-value=1.8e-27 Score=229.19 Aligned_cols=198 Identities=14% Similarity=0.157 Sum_probs=164.3
Q ss_pred CcEEEEEECCCCCCcEEEEEEeEeCCCCeeEEEEecCCCCCEEEcCcccEEEcccCCccc-----CcEEEEEEEEecCC-
Q psy4697 48 NEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGERFSISRQGDISLMQCLDYET-----EDSYRFTVYATDTL- 121 (383)
Q Consensus 48 ~~y~~~V~En~~~gt~v~~v~A~D~D~~~v~Ysi~~~~~~~F~Id~tG~I~~~~~LD~E~-----~~~y~~~V~A~D~~- 121 (383)
..|.++.+|+.+.|+.++++.+.|+ .++|+|.... .+|.|+++|.|++.++||||. ...|.++|.|.|++
T Consensus 7 ~~~~atd~D~g~ng~v~y~l~~~~~---~~~f~i~~~~-~~F~i~~tG~l~~~~~LD~E~~~~~~~~~~~l~v~a~d~~~ 82 (316)
T 3ubf_A 7 KRIEFTEADGDTEGKSVFQLEKETD---KETFKIRDDN-PWVTVETNGAVRVKKKWDYEELGPEKTIDFWVIITNMGHNA 82 (316)
T ss_dssp EEEEEESGGGCSTTCEEEECCCSST---TCEEEESSCC-SSEEECTTSEEEESSCCCGGGSCTTCEEEEEEEEEC-----
T ss_pred EEEEEEecCCCCCceEEEEEEcCCC---cceEEEeCCC-CeEEECCCeEEEECCccChhhcccccceEEEEEEEEcCCCC
Confidence 3577888888889999988877553 6789987543 589999999999999999998 35788999999975
Q ss_pred ---ceeEEEEEEEEeecCCCCCcccCCc--eeEEEeccCCCCCCCCceEEEEEeeeCCCCCeEEEEEe-CCCCCCEEEcC
Q psy4697 122 ---MTTSATVNISVVNVNDWDPRFRYPQ--YELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR-GPYEKMFSIND 195 (383)
Q Consensus 122 ---~~s~~tV~I~V~DvNDn~P~f~~~~--~~~~v~~~~~e~~~~g~~v~~v~A~D~D~g~~i~ysi~-~~~~~~F~i~~ 195 (383)
++++++|.|.|.|+|||+|.|.... |.+.|+ |+.++|+.|+++.|+|+|.|.+++|+|. ++..++|.|++
T Consensus 83 ~~~~s~~~~v~I~V~DvNDn~P~F~~~~~~y~~~v~----En~~~gt~v~~v~A~D~D~g~ni~Y~i~~~~~~~~F~Id~ 158 (316)
T 3ubf_A 83 GIKYTDNQRVIILVKDVNDEPPYFINRPLPMQAVVQ----LNAPPNTPVFTLQARDPDTDHNIHYFIVRDRTGGRFEVDE 158 (316)
T ss_dssp --CCCEEEEEEEEEECTTCCCCEECCSSSSEEEEEC----TTCCTTCEEEECCEECSSTTCCEEEEEEEEESSSCEEECT
T ss_pred CCcccceEEEEEEEEECCCCCCccCCCCCCEEEEEe----CCCCCCCEEEEEEEECCCCCCceEEEEEeCCCCCEEEEEC
Confidence 5889999999999999999999876 789999 9999999999999999999989999997 55678999997
Q ss_pred -CCcEEEecc-CCCCcceEEEEEEEeeCCC----CCceeEEEEEEEEeCCcccCcccccCCCCcee
Q psy4697 196 -SGHISIVDL-SALNTSTIQLVVVATDTGN----PPRQASVPAIMHFPEAIVQQASSKLNSGTSST 255 (383)
Q Consensus 196 -tG~i~l~~~-~~~~~~~y~L~V~a~D~g~----p~~sst~tv~I~v~~~~~~~~p~~~~~~~~~~ 255 (383)
+|.|++.+. +++....|.|.|.|+|+|. |+++++++|+|.|. + |+++|.|....+...
T Consensus 159 ~tG~i~~~~~lD~e~~~~y~l~V~A~D~g~~~~~~~~~~~~~v~I~V~-d-nDn~P~F~~~~y~~~ 222 (316)
T 3ubf_A 159 RSGVVRTRGTDLFQLDMEYVLYVKAEDQNGKVDDRRFQSTPEERLSIV-G-GKRAPQFYMPSYEAE 222 (316)
T ss_dssp TTCEEEECSSCCCCTTCEEEEEEEEEESCC-------CBCCCEEEEEE-E-SCCCCEESSSSEEEE
T ss_pred CccEEEECCcCCcccCcEEEEEEEEEeCCCCCCCccccceEEEEEEEE-c-CCCCCEEcCCCceEE
Confidence 999998764 6777889999999999985 57889999999995 4 888998875544433
No 26
>3mvs_A Cadherin-23, otocadherin; adhesion, extracellular domain, cell adhesion; 1.10A {Mus musculus} PDB: 4apx_A* 2whv_A 2wcp_A* 4aq8_A 4axw_A* 4aqe_A* 4aqa_A* 2wd0_A* 2wbx_A
Probab=99.95 E-value=1.2e-26 Score=210.80 Aligned_cols=133 Identities=24% Similarity=0.329 Sum_probs=123.4
Q ss_pred CCcCCCCeEEEEEEEEECCCCCceEEEEEEEEEeeCCCCCCeeecCcEEEEEECCCCCCcEEEEEEeEeCCC---CeeEE
Q psy4697 3 NEDDFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKY 79 (383)
Q Consensus 3 ~DrE~~~~y~l~V~a~D~g~~~~~s~~~v~V~V~DvNdn~P~F~~~~y~~~V~En~~~gt~v~~v~A~D~D~---~~v~Y 79 (383)
.|||..+.|.|+|.|+|.+. .++++|.|.|.|+|||+|.|.+..|.+.|+||.++|+.|+++.|+|+|. +.++|
T Consensus 70 LD~E~~~~y~l~v~a~D~~~---~~~~~v~I~V~DvNDn~P~f~~~~y~~~v~E~~~~gt~v~~v~A~D~D~g~n~~v~Y 146 (210)
T 3mvs_A 70 LDRETKSEFTVEFSVSDHQG---VITRKVNIQVGDVNDNAPTFHNQPYSVRIPENTPVGTPIFIVNATDPDLGAGGSVLY 146 (210)
T ss_dssp CCTTTCCEEEEEEEEECSSC---EEEEEEEEEEECCCCCCCEECSCSEEEEEETTCCTTCEEEECCEECCSSGGGGCEEE
T ss_pred cCCcccceEEEEEEEEeCCC---CEEEEEEEEEEeCCCCCCcCCCceEEEEEECCCCCCCEEEEEEEEeCCCCCCceEEE
Confidence 48999999999999999764 3678899999999999999999999999999999999999999999994 78999
Q ss_pred EEecCCCCCEEEcC-cccEEEcccCCcccCcEEEEEEEEecCC----ceeEEEEEEEEeecCCCC
Q psy4697 80 WLSNDYGERFSISR-QGDISLMQCLDYETEDSYRFTVYATDTL----MTTSATVNISVVNVNDWD 139 (383)
Q Consensus 80 si~~~~~~~F~Id~-tG~I~~~~~LD~E~~~~y~~~V~A~D~~----~~s~~tV~I~V~DvNDn~ 139 (383)
+|... ..+|.|++ +|.|++.++||||....|.|+|.|+|+| ++++++|.|+|.|+|||+
T Consensus 147 ~i~~~-~~~F~Id~~tG~i~~~~~LD~E~~~~y~l~V~a~D~g~~~~~s~~~~v~I~V~DvND~~ 210 (210)
T 3mvs_A 147 SFQPP-SPFFAIDSARGIVTVIQELDYEVTQAYQLTVNATDQDKTRPLSTLANLAIIITDMQDMD 210 (210)
T ss_dssp EESSC-CSSEEECTTTCEEEECSCCCTTTCSEEEEEEEEEECCSSSCCEEEEEEEEEEECCCCCC
T ss_pred EEeCC-CCCEEEeCCcEEEEECCcCCCcccceEEEEEEEEECCCCCCCEEEEEEEEEEEccCCCC
Confidence 99764 46899996 9999999999999999999999999976 689999999999999985
No 27
>3ppe_A Vascular endothelial cadherin; extracellular cadherin (EC) domain, beta barrel, IG-domain L domain swapped dimer interface; 2.10A {Gallus gallus}
Probab=99.94 E-value=6.2e-26 Score=205.02 Aligned_cols=131 Identities=20% Similarity=0.212 Sum_probs=122.4
Q ss_pred CCcCCCCeEEEEEEEEECCCC-CceEEEEEEEEEeeCCCCCCeeecCcEEEEEECCCCCCcEEEEEEeEeCC------CC
Q psy4697 3 NEDDFLQPITLVVRAIQYDNQ-DRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPR------DL 75 (383)
Q Consensus 3 ~DrE~~~~y~l~V~a~D~g~~-~~~s~~~v~V~V~DvNdn~P~F~~~~y~~~V~En~~~gt~v~~v~A~D~D------~~ 75 (383)
.|||..+.|.|+|.|+|.|.| ++++.+.|.|.|.|+|||+|.|.+..|.++|+||.++|+.|++|.|+|+| ++
T Consensus 61 LDrE~~~~y~l~v~a~D~g~~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~~~gt~v~~v~A~D~D~~~~g~n~ 140 (203)
T 3ppe_A 61 LDREKKAEYELTAHIIDRRNNRSLEPPSKFIIKVSDINDNAPIFVQKIFNGSVPEMSRLGTSVTKVTAEDADDPTVAGHA 140 (203)
T ss_dssp CCTTTCCEEEEEEEEEETTTTEECSCCEEEEEEEECCCCCCCEESCSEEEEEEETTCCTTCEEEECCEECCSCTTSSSTT
T ss_pred ccccccceEEEEEEEEECCCCCcccceEEEEEEEcCCCCCCCCccCCccEEEEeccCCCCcEEEEEEEEcCCCcCCCCce
Confidence 489999999999999999887 67888999999999999999999999999999999999999999999999 37
Q ss_pred eeEEEEecCCCCCEEEcCcccEEEc-ccCCcccCcEEEEEEEEecC-C---ceeEEEEEEEEee
Q psy4697 76 RVKYWLSNDYGERFSISRQGDISLM-QCLDYETEDSYRFTVYATDT-L---MTTSATVNISVVN 134 (383)
Q Consensus 76 ~v~Ysi~~~~~~~F~Id~tG~I~~~-~~LD~E~~~~y~~~V~A~D~-~---~~s~~tV~I~V~D 134 (383)
.++|+|.+.. .+|.|+.+|.|++. ++||||....|.|.|.|+|+ | ++++++|.|+|.|
T Consensus 141 ~i~Y~i~~~~-~~F~I~~tG~i~~~~~~LD~E~~~~y~l~V~A~D~~G~p~~s~t~~v~I~V~D 203 (203)
T 3ppe_A 141 TVTYQIIKGN-EYFTVDDSGVIFTARADLDRESQSAYEIIVKAKDALGLTGESSTATVIIRLTD 203 (203)
T ss_dssp CEEEEEEEST-TTEEECTTSEEEESCSCCCTTTCSEEEEEEEEEETTCCCCSSSEEEEEEEEEC
T ss_pred EEEEEEeCCC-CcEEEeCCeEEEECCcCCCcccCCEEEEEEEEEeCCCCCCCeEEEEEEEEEEC
Confidence 8999998754 48999999999999 99999999999999999997 5 7899999999987
No 28
>3qrb_A Cadherin-1; cell adhesion; HET: PGE; 1.80A {Mus musculus} PDB: 1ff5_A 3lng_A 2qvf_B 1edh_A 3lne_A 1q1p_A 3lni_A 3q2l_A* 3q2n_A* 3lnh_A 3lnf_A 2o72_A 1suh_A
Probab=99.94 E-value=7.5e-26 Score=205.94 Aligned_cols=132 Identities=18% Similarity=0.286 Sum_probs=122.8
Q ss_pred CCcCCCCeEEEEEEEEECCCCCceEEEEEEEEEeeCCCCCCeeecCcEEEEEECCCCCCcEEEEEEeEeCCC------Ce
Q psy4697 3 NEDDFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRD------LR 76 (383)
Q Consensus 3 ~DrE~~~~y~l~V~a~D~g~~~~~s~~~v~V~V~DvNdn~P~F~~~~y~~~V~En~~~gt~v~~v~A~D~D~------~~ 76 (383)
.|||..+.|.|+|.|+|.|.++++++++|.|.|.|+|||+|.|.+..|.+.|+||.++|+.|++|.|+|+|. +.
T Consensus 66 LDrE~~~~y~l~v~a~D~~~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~En~~~gt~v~~v~A~D~D~~~~~~n~~ 145 (213)
T 3qrb_A 66 LDREAIAKYILYSHAVSSNGEAVEDPMEIVITVTDQNDNRPEFTQEVFEGSVAEGAVPGTSVMKVSATDADDDVNTYNAA 145 (213)
T ss_dssp CCTTTCSEEEEEEEEEETTSCBCSCCEEEEEEEECCSCCCCEESCSEEEEEEETTCCTTCEEEECCEECCSCTTTSSTTC
T ss_pred cCcccCceEEEEEEEEeCCCCcccceEEEEEEEEEccCCCCccCCCceEEEEECCCCCCcEEEEEEEEeCCCCCCCcCcE
Confidence 489999999999999999999999999999999999999999999999999999999999999999999984 58
Q ss_pred eEEEEecC-----CCCCEEEcC-cccEEEc-ccCCcccCcEEEEEEEEecCC---ceeEEEEEEEEee
Q psy4697 77 VKYWLSND-----YGERFSISR-QGDISLM-QCLDYETEDSYRFTVYATDTL---MTTSATVNISVVN 134 (383)
Q Consensus 77 v~Ysi~~~-----~~~~F~Id~-tG~I~~~-~~LD~E~~~~y~~~V~A~D~~---~~s~~tV~I~V~D 134 (383)
++|+|... ...+|.|++ +|.|++. +.||||....|.|.|.|+|+| ++++++|.|+|.|
T Consensus 146 i~Y~i~~~~~~~~~~~~F~Id~~tG~i~~~~~~LD~E~~~~y~l~V~A~D~g~~~~s~t~~v~I~V~D 213 (213)
T 3qrb_A 146 IAYTIVSQDPELPHKNMFTVNRDTGVISVLTSGLDRESYPTYTLVVQAADLQGEGLSTTAKAVITVKD 213 (213)
T ss_dssp CEEEEEEEESCCSCSCSEEECTTTCEEEECSSCCCTTTCCEEEEEEEEETGGGTSCEEEEEEEEEEEC
T ss_pred EEEEEccCCCCCCcCCeEEEECCCcEEEEccCCCCCccCceEEEEEEEEeCCCCCceEEEEEEEEEEC
Confidence 99999762 456899996 9999997 899999999999999999954 8999999999987
No 29
>3k5r_A Cadherin 13; mouse, structural protein; 2.00A {Mus musculus} PDB: 3k5s_A
Probab=99.94 E-value=8.3e-26 Score=206.37 Aligned_cols=132 Identities=20% Similarity=0.262 Sum_probs=122.5
Q ss_pred CCcCCCCeEEEEEEEEECCCCCceEEEEEEEEEeeCCCCCCeeecCcEEEEEECCCCCCcEEEEEEeEeCCC-----Cee
Q psy4697 3 NEDDFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRD-----LRV 77 (383)
Q Consensus 3 ~DrE~~~~y~l~V~a~D~g~~~~~s~~~v~V~V~DvNdn~P~F~~~~y~~~V~En~~~gt~v~~v~A~D~D~-----~~v 77 (383)
.|||..+.|.|+|.|+|.|.|+++++++|.|.|.|+|||+|.|.+..|.+.|+||.++|+.|++|.|+|+|. +.+
T Consensus 66 LDrE~~~~y~l~v~a~D~g~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~~~gt~v~~v~A~D~D~~~g~n~~i 145 (218)
T 3k5r_A 66 LDRETIATYQLYVETTDASGKTLEGPVPLEVIVIDQNDNRPIFREGPYIGHVMEGSPTGTTVMRMTAFDADDPATDNALL 145 (218)
T ss_dssp CCTTTCSEEEEEEEEECSSSCEEEEEEEEEEEEECTTCCCCCCCSCSEEEEEETTCCTTCEEEECCCSCSSSSCGGGGCE
T ss_pred CCcccCCEEEEEEEEEECCCCceeeeEEEEEEEEeCCCCCCcccCCceEEEEECCCCCCCEEEEEEEEeCCCCCCCCcEE
Confidence 489999999999999999999999999999999999999999999999999999999999999999999995 789
Q ss_pred EEEEecCC-----CCCEEEcC-cccEEEc---ccCCccc--CcEEEEEEEEecCC-----ceeEEEEEEEEee
Q psy4697 78 KYWLSNDY-----GERFSISR-QGDISLM---QCLDYET--EDSYRFTVYATDTL-----MTTSATVNISVVN 134 (383)
Q Consensus 78 ~Ysi~~~~-----~~~F~Id~-tG~I~~~---~~LD~E~--~~~y~~~V~A~D~~-----~~s~~tV~I~V~D 134 (383)
+|+|.+.. .++|.|++ +|.|++. +.||||. ...|.|.|.|+|+| ++++++|+|+|.|
T Consensus 146 ~Y~i~~~~~~~~~~~~F~Id~~tG~i~~~~~~~~LD~E~~~~~~y~l~V~a~D~gg~~p~~sst~~v~I~V~D 218 (218)
T 3k5r_A 146 RYNIRQQTPDKPSPNMFYIDPEKGDIVTVVSPALLDRETLENPKYELIIEAQDMAGLDVGLTGTATATIVIDD 218 (218)
T ss_dssp EEEEEEEESCCSCSCSEEECTTTCEEEECSCGGGCCGGGCSCSEEEEEEEEEECSSTTTTCEEEEEEEEEEEC
T ss_pred EEEEecCCCCCCcCCEEEEECCccEEEEeccCCCCCccccCCCeEEEEEEEEECCCCCCCeeEEEEEEEEEEC
Confidence 99998732 26899996 9999987 7999999 77999999999965 7899999999987
No 30
>2qvi_A Cadherin-2; beta barrel, strand SWAP, domain SWAP, calcium, cell adhesion, cleavage on PAIR of basic residues, glycoprotein, membrane; 3.01A {Mus musculus} SCOP: b.1.6.1 b.1.6.1 PDB: 1ncj_A
Probab=99.93 E-value=9.1e-26 Score=205.70 Aligned_cols=132 Identities=20% Similarity=0.276 Sum_probs=122.9
Q ss_pred CCcCCCCeEEEEEEEEECCCCCceEEEEEEEEEeeCCCCCCeeecCcEEEEEECCCCCCcEEEEEEeEeCCC-----Cee
Q psy4697 3 NEDDFLQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRD-----LRV 77 (383)
Q Consensus 3 ~DrE~~~~y~l~V~a~D~g~~~~~s~~~v~V~V~DvNdn~P~F~~~~y~~~V~En~~~gt~v~~v~A~D~D~-----~~v 77 (383)
.|||..+.|.|+|.|+|.|.|++++++.|.|.|.|+|||+|.|.+..|.++|+||.++|+.|++|.|+|+|. +.+
T Consensus 66 LDrE~~~~y~l~v~a~D~g~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~En~~~gt~v~~v~A~D~D~~~g~n~~i 145 (215)
T 2qvi_A 66 LDRELIARFHLRAHAVDINGNQVENPIDIVINVIDMNDNRPEFLHQVWNGSVPEGSKPGTYVMTVTAIDADDPNALNGML 145 (215)
T ss_dssp CCTTTCSEEEEEEEEEETTTCCCEEEEEEEEEEECCCCCCCBCSSSEEEEEECSSCCTTCEEEECCCBCSSCTTSTTTCC
T ss_pred cCcccCCeEEEEEEEEECCCCceeeeEEEEEEEeECCCCCCcccCceeEEEEeCCCCCCCEEEEEEEEeCCCCCCCCcEE
Confidence 489999999999999999999999999999999999999999999999999999999999999999999994 789
Q ss_pred EEEEecC-----CCCCEEEcC-cccEEEc-ccCCcccCcEEEEEEEEecCC------ceeEEEEEEEEee
Q psy4697 78 KYWLSND-----YGERFSISR-QGDISLM-QCLDYETEDSYRFTVYATDTL------MTTSATVNISVVN 134 (383)
Q Consensus 78 ~Ysi~~~-----~~~~F~Id~-tG~I~~~-~~LD~E~~~~y~~~V~A~D~~------~~s~~tV~I~V~D 134 (383)
+|+|.+. ...+|.|++ +|.|++. ++||||....|.|.|.|+|+| ++++++|.|+|+|
T Consensus 146 ~Y~i~~~~~~~~~~~~F~Id~~tG~i~~~~~~LD~E~~~~y~l~V~a~D~g~~p~~~ls~t~~v~I~V~D 215 (215)
T 2qvi_A 146 RYRILSQAPSTPSPNMFTINNETGDIITVAAGLDREKVQQYTLIIQATDMEGNPTYGLSNTATAVITVTD 215 (215)
T ss_dssp CCEEEECSSCCSSTTCEEECTTTCEEEECSCCCCTTTCSEEEEEEECCTTTTCTTTSCCCEEEEEEEECC
T ss_pred EEEEecCCCCCCcCCeEEEcCCCcEEEEecCCCCcccCCeEEEEEEEEECCCCCCCCcceEEEEEEEEEC
Confidence 9999874 357899997 9999995 899999999999999999963 6889999999987
No 31
>2yst_A Protocadherin-7; BH-PCDH, beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.93 E-value=1.1e-26 Score=192.22 Aligned_cols=108 Identities=23% Similarity=0.273 Sum_probs=100.8
Q ss_pred EEEeeCCCCCCeeecCcEEEEEECCCCCCcEEEEEEeEeCCC---CeeEEEEecCC---CCCEEEcC-cccEEEcccCCc
Q psy4697 33 VSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWLSNDY---GERFSISR-QGDISLMQCLDY 105 (383)
Q Consensus 33 V~V~DvNdn~P~F~~~~y~~~V~En~~~gt~v~~v~A~D~D~---~~v~Ysi~~~~---~~~F~Id~-tG~I~~~~~LD~ 105 (383)
++|.|+|||+|+|.+..|.++|+||.++|+.|++|.|+|+|. +.++|+|.+.. ..+|.|++ +|.|++.++|||
T Consensus 2 ~~V~DvNDn~P~F~~~~y~~~v~En~~~Gt~v~~v~A~D~D~g~n~~i~Y~i~~~~~~~~~~F~Id~~tG~I~~~~~LD~ 81 (119)
T 2yst_A 2 SSGSSGNDNSPRFEKSVYEADLAENSAPGTPILQLRAADLDVGVNGQIEYVFGAATESVRRLLRLDETSGWLSVLHRIDR 81 (119)
T ss_dssp CCCCCSCCCCCCCSSSEEEEEEETTCCTTCEEEECCCCCSSSSCCSCCCCEECSCCTTHHHHEEECTTTCEEEECSCCCT
T ss_pred CeEecCCCCCCCcCCCcEEEEEECCCCCCCEEEEEEEEeCCCCCCCeEEEEEecCCCccccEEEEeCCceEEEECccCCc
Confidence 468999999999999999999999999999999999999995 78999998753 35899996 999999999999
Q ss_pred ccCcEEEEEEEEecCC---ceeEEEEEEEEeecCCCCC
Q psy4697 106 ETEDSYRFTVYATDTL---MTTSATVNISVVNVNDWDP 140 (383)
Q Consensus 106 E~~~~y~~~V~A~D~~---~~s~~tV~I~V~DvNDn~P 140 (383)
|....|.|.|.|+|+| ++++++|.|+|.|+|||+|
T Consensus 82 E~~~~y~l~V~A~D~g~p~~s~~~~v~I~V~DvNDn~P 119 (119)
T 2yst_A 82 EEVNQLRFTVMARDRGQPPKTDKATVVLNIKDENDNVP 119 (119)
T ss_dssp TTCSEEEEEEEECCSBTTBCCEEEEEEEEEECSTTCCC
T ss_pred ccCCEEEEEEEEEECCCCCcEEEEEEEEEEEeccCCCC
Confidence 9999999999999976 6789999999999999998
No 32
>3lnd_A CDH6 protein, cadherin 6; cell adhesion, cell membrane, membrane, transmembr; 2.82A {Mus musculus}
Probab=99.92 E-value=3.5e-25 Score=200.61 Aligned_cols=131 Identities=21% Similarity=0.270 Sum_probs=115.2
Q ss_pred CCcCCCCeEEEEEEEEECC-CCCceEEEEEEEEEeeCCCCCCeeecCcEEEEEECCCCCCcEEEEEEeEeCCC------C
Q psy4697 3 NEDDFLQPITLVVRAIQYD-NQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRD------L 75 (383)
Q Consensus 3 ~DrE~~~~y~l~V~a~D~g-~~~~~s~~~v~V~V~DvNdn~P~F~~~~y~~~V~En~~~gt~v~~v~A~D~D~------~ 75 (383)
.|||..+.|.|+|.|+|.| .+++++.+.|.|.|.|+|||+|.|.+..|.+.|+||.++|+.|++|.|+|+|. +
T Consensus 63 LDrE~~~~y~l~v~a~D~~~~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~~~gt~v~~v~A~D~D~~~~g~n~ 142 (207)
T 3lnd_A 63 LDREEKPVYILRAQAVNRRTGRPVEPESEFIIKIHDINDNEPIFTKDVYTATVPEMADVGTFVVQVTATDADDPTYGNSA 142 (207)
T ss_dssp CCGGGCCEEEC----CBSSSCCCCSCCCCCEEEEECCSCCCCEESCSEEEEEEESSCCTTCEEEECCEECSSCTTSSSTT
T ss_pred cCcccCCEEEEEEEEEECCCCCccccEEEEEEEECccCCCCCccCCCceEEEEeCCCCCCCEEEEEEEEeCCCCCCCCCc
Confidence 4899999999999999988 47788999999999999999999999999999999999999999999999993 5
Q ss_pred eeEEEEecCCCCCEEEcC-cccEEEc-ccCCcccCcEEEEEEEEecC-----CceeEEEEEEEEee
Q psy4697 76 RVKYWLSNDYGERFSISR-QGDISLM-QCLDYETEDSYRFTVYATDT-----LMTTSATVNISVVN 134 (383)
Q Consensus 76 ~v~Ysi~~~~~~~F~Id~-tG~I~~~-~~LD~E~~~~y~~~V~A~D~-----~~~s~~tV~I~V~D 134 (383)
.++|+|.+.. .+|.|++ +|.|++. +.||||....|.|.|.|+|+ +++++++|.|+|.|
T Consensus 143 ~i~Y~i~~~~-~~F~Id~~tG~i~~~~~~lD~E~~~~y~l~V~A~D~g~~~~~~s~t~~v~I~V~D 207 (207)
T 3lnd_A 143 KVVYSILQGQ-PYFSVESETGIIKTALLNMDRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTD 207 (207)
T ss_dssp CCEEEEEESG-GGEEECTTTCEEEECCSSCCC--CCEEEEEEEEESGGGCTTCBEEEEEEEEEEEC
T ss_pred EEEEEEcCCC-CCEEEcCCCcEEEECcccCCcccCCEEEEEEEEEECCCCCCCcEeEEEEEEEEeC
Confidence 8999998743 4899996 9999999 99999999999999999996 37899999999987
No 33
>2ee0_A Protocadherin-9; Ca domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.90 E-value=1.8e-24 Score=177.56 Aligned_cols=104 Identities=24% Similarity=0.321 Sum_probs=96.2
Q ss_pred EEEeeCCCCCCeeecCcEEEEEECCCCCCcEEEEEEeEeCCC---CeeEEEEec----CCCCCEEEcC-cccEEEcccCC
Q psy4697 33 VSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWLSN----DYGERFSISR-QGDISLMQCLD 104 (383)
Q Consensus 33 V~V~DvNdn~P~F~~~~y~~~V~En~~~gt~v~~v~A~D~D~---~~v~Ysi~~----~~~~~F~Id~-tG~I~~~~~LD 104 (383)
|.|.|+|||+|+|.+..|.++|+||.++|+.|++|.|+|+|. +.++|+|.+ +...+|.|++ +|.|++.++||
T Consensus 2 ~~V~DvNDn~P~F~~~~y~~~v~En~~~Gt~v~~v~A~D~D~g~n~~i~Y~i~~~~~~~~~~~F~Id~~tG~I~~~~~LD 81 (114)
T 2ee0_A 2 SSGSSGNDNRPVFKEGQVEVHIPENAPVGTSVIQLHATDADIGSNAEIRYIFGAQVAPATKRLFALNNTTGLITVQRSLD 81 (114)
T ss_dssp CCCCCCCCCCCCCSCSEEEEEEETTCCTTCEEEECCCCSCSSCCCSCCEEEECSSCCHHHHHHEEECTTTCEEEECSCCC
T ss_pred CeEeeCCCCCCCcCCCcEEEEEECCCCCCCEEEEEEEEeCCCCCCcEEEEEEccCCCCCccceEEEeCCeeEEEECccCC
Confidence 468999999999999999999999999999999999999995 789999976 2456899997 99999999999
Q ss_pred cccCcEEEEEEEEecCC-ceeEEEEEEEEeecC
Q psy4697 105 YETEDSYRFTVYATDTL-MTTSATVNISVVNVN 136 (383)
Q Consensus 105 ~E~~~~y~~~V~A~D~~-~~s~~tV~I~V~DvN 136 (383)
||..+.|.|.|+|+|+| ..++++|.|+|+|+|
T Consensus 82 ~E~~~~y~l~V~A~D~g~~~~~~~v~I~V~DvN 114 (114)
T 2ee0_A 82 REETAIHKVTVLASDGSSTPARATVTINVTDVN 114 (114)
T ss_dssp TTTCSEEEEEEEEESSSSSCEEEEEEEEEECCC
T ss_pred cccCcEEEEEEEEEECCCCceEEEEEEEEEECC
Confidence 99999999999999976 568899999999998
No 34
>4apx_B Protocadherin-15, otocadherin; cell adhesion, hearing, deafness, CDH23, PCDH15; HET: MES; 1.65A {Mus musculus} PDB: 4aq8_C 4aqa_B* 4aqe_B* 4axw_B*
Probab=99.88 E-value=7.1e-22 Score=182.96 Aligned_cols=132 Identities=20% Similarity=0.268 Sum_probs=111.5
Q ss_pred CCcCCCCeEEEEEEEEECCC--CCceEEEEEEEEEeeCCCCCCeeecCcEEEEEECCCCCCcEEEE-----EEeEeCCC-
Q psy4697 3 NEDDFLQPITLVVRAIQYDN--QDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLT-----VTTNKPRD- 74 (383)
Q Consensus 3 ~DrE~~~~y~l~V~a~D~g~--~~~~s~~~v~V~V~DvNdn~P~F~~~~y~~~V~En~~~gt~v~~-----v~A~D~D~- 74 (383)
.|||....|.+.+.+.+.+. .+..+.+.|+|.|.|+|||+|+|.+..|.++|+||.++|+.|++ |.|+|+|.
T Consensus 83 LDrE~~~~~~~~~~~v~~~~~~~~~~~~~~V~I~V~DvNDn~P~F~~~~y~~~v~En~~~Gt~v~~~~~~~v~A~D~D~g 162 (242)
T 4apx_B 83 LDRDPPMNIHSIVVQVQCVNKKVGTVIYHEVRIVVRDRNDNSPTFKHESYYATVNELTPVGTTIFTGFSGDNGATDIDDG 162 (242)
T ss_dssp CCCSTTTCCCEEEEEEEEEETTTCCEEEEEEEEEEECCCCCCCEESSSCEEEEEETTCCTTCEEECTTTTTTSEECCSSG
T ss_pred eeccCCCceEEEEEEEEeECCCCCeEEEEEEEEEEEeCCCCCCcccceeeeeEeeeccCCCCEEEEeeecccccccCCCC
Confidence 58998877766655555332 35567788999999999999999999999999999999999976 77999996
Q ss_pred --CeeEEEEecCCC-----CCEEEc-C-cccEEEcccCCcccCcEEEEEEEEecCC------ceeEEEEEEEEee
Q psy4697 75 --LRVKYWLSNDYG-----ERFSIS-R-QGDISLMQCLDYETEDSYRFTVYATDTL------MTTSATVNISVVN 134 (383)
Q Consensus 75 --~~v~Ysi~~~~~-----~~F~Id-~-tG~I~~~~~LD~E~~~~y~~~V~A~D~~------~~s~~tV~I~V~D 134 (383)
+.|+|+|..... ..|.|+ + +|.|++.+.||||....|.|.|+|+|+| +++.++|+|+|+-
T Consensus 163 ~N~~v~Ysi~~~~~~~~~~~~F~Id~~~tG~i~~~~~LD~E~~~~y~l~V~A~D~G~~~~~~~~~~~~vtVnVe~ 237 (242)
T 4apx_B 163 PNGQIEYVIQYNPEDPTSNDTFEIPLMLTGNVVLRKRLNYEDKTRYYVIIQANDRAQNLNERRTTTTTLTVDLEH 237 (242)
T ss_dssp GGGCEEEEEECCTTSTTHHHHEECSSTTTCCEEECSCCCTTTCCEEEEEEEEEECCSSGGGCCEEEEEEEEEEEC
T ss_pred cCCceEEEEecCCCCcccccceEEcCCCceEEEECCcCChhhCCEEEEEEEEEECCcCchhcccCCceEEEEEee
Confidence 789999986432 369998 5 8999999999999999999999999976 5677888888764
No 35
>2yst_A Protocadherin-7; BH-PCDH, beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.84 E-value=3.2e-21 Score=159.27 Aligned_cols=111 Identities=23% Similarity=0.432 Sum_probs=99.3
Q ss_pred EEEeecCCCCCcccCCceeEEEeccCCCCCCCCceEEEEEeeeCCCCC--eEEEEEeCCC---CCCEEEcC-CCcEEEec
Q psy4697 130 ISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGD--RVTLSLRGPY---EKMFSIND-SGHISIVD 203 (383)
Q Consensus 130 I~V~DvNDn~P~f~~~~~~~~v~~~~~e~~~~g~~v~~v~A~D~D~g~--~i~ysi~~~~---~~~F~i~~-tG~i~l~~ 203 (383)
++|.|+|||+|+|..+.|.+.|+ |+.++|+.|+++.|+|+|.|. .++|+|.+.. ..+|.|++ +|.|++.+
T Consensus 2 ~~V~DvNDn~P~F~~~~y~~~v~----En~~~Gt~v~~v~A~D~D~g~n~~i~Y~i~~~~~~~~~~F~Id~~tG~I~~~~ 77 (119)
T 2yst_A 2 SSGSSGNDNSPRFEKSVYEADLA----ENSAPGTPILQLRAADLDVGVNGQIEYVFGAATESVRRLLRLDETSGWLSVLH 77 (119)
T ss_dssp CCCCCSCCCCCCCSSSEEEEEEE----TTCCTTCEEEECCCCCSSSSCCSCCCCEECSCCTTHHHHEEECTTTCEEEECS
T ss_pred CeEecCCCCCCCcCCCcEEEEEE----CCCCCCCEEEEEEEEeCCCCCCCeEEEEEecCCCccccEEEEeCCceEEEECc
Confidence 46899999999999999999999 999999999999999999985 6999998543 35899997 99999876
Q ss_pred -cCCCCcceEEEEEEEeeCCCCCceeEEEEEEEEeCCcccCcc
Q psy4697 204 -LSALNTSTIQLVVVATDTGNPPRQASVPAIMHFPEAIVQQAS 245 (383)
Q Consensus 204 -~~~~~~~~y~L~V~a~D~g~p~~sst~tv~I~v~~~~~~~~p 245 (383)
++++....|.|.|.|+|+|.|+++++++|+|.| .+.|+++|
T Consensus 78 ~LD~E~~~~y~l~V~A~D~g~p~~s~~~~v~I~V-~DvNDn~P 119 (119)
T 2yst_A 78 RIDREEVNQLRFTVMARDRGQPPKTDKATVVLNI-KDENDNVP 119 (119)
T ss_dssp CCCTTTCSEEEEEEEECCSBTTBCCEEEEEEEEE-ECSTTCCC
T ss_pred cCCcccCCEEEEEEEEEECCCCCcEEEEEEEEEE-EeccCCCC
Confidence 478888999999999999999999999999999 67777665
No 36
>2yqg_A Desmoglein-2, HDGC; cadherin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.83 E-value=3.3e-21 Score=160.15 Aligned_cols=107 Identities=19% Similarity=0.302 Sum_probs=97.2
Q ss_pred CCCCCCeeecCcEEEEEECCCCCCcEEEEEEeEeCCC---CeeEEEEecC-----CCCCEEEcC-cccEEEcccCCcccC
Q psy4697 38 TSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRD---LRVKYWLSND-----YGERFSISR-QGDISLMQCLDYETE 108 (383)
Q Consensus 38 vNdn~P~F~~~~y~~~V~En~~~gt~v~~v~A~D~D~---~~v~Ysi~~~-----~~~~F~Id~-tG~I~~~~~LD~E~~ 108 (383)
.+.+.|.|..+.|.+.+.||.++|+.|++|. +|+|. +.++|+|.+. ...+|.|++ +|.|++.++||||..
T Consensus 5 ~~r~~p~f~~~~~~v~e~e~~~~gt~v~~v~-~D~D~g~n~~i~Y~i~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~ 83 (123)
T 2yqg_A 5 SSGQKRAWITAPVALREGEDLSKKNPIAKIH-SDLAEERGLKITYKYTGKGITEPPFGIFVFNKDTGELNVTSILDREET 83 (123)
T ss_dssp SSCSCCSSCCCCEEEESSSCCCSSCCCBCCC-CHHHHHHTCCCEEEEEEBTTTBSSCSSEEEETTTTEEEECSCCBTTTB
T ss_pred ccccCCccCCCCEEEEecCCCCCCCEEEEEE-ECCCCCCCceEEEEEecCCCCCCcCCCEEEeCCcCEEEECcccCcccC
Confidence 4678999999999999999999999999999 58884 7999999863 457899997 999999999999999
Q ss_pred cEEEEEEEEecCC---ceeEEEEEEEEeecCCCCCcccCC
Q psy4697 109 DSYRFTVYATDTL---MTTSATVNISVVNVNDWDPRFRYP 145 (383)
Q Consensus 109 ~~y~~~V~A~D~~---~~s~~tV~I~V~DvNDn~P~f~~~ 145 (383)
..|.|+|.|+|+| ++++++|.|+|+|+|||+|+|.++
T Consensus 84 ~~y~l~V~A~D~g~p~~~~~~~v~I~V~DvNDn~P~F~~~ 123 (123)
T 2yqg_A 84 PFFLLTGYALDARGNNVEKPLELRIKVLDINDNEPVFTQD 123 (123)
T ss_dssp SEEEEEEEEECTTCCEEEEEECCEEEEECTTCCCCCCCCC
T ss_pred ceEEEEEEEEECCCCceEEEEEEEEEEEEcCCCCCEeCCC
Confidence 9999999999976 688899999999999999999753
No 37
>2ee0_A Protocadherin-9; Ca domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.80 E-value=7.7e-20 Score=149.85 Aligned_cols=102 Identities=24% Similarity=0.409 Sum_probs=90.6
Q ss_pred EEEeecCCCCCcccCCceeEEEeccCCCCCCCCceEEEEEeeeCCCCC--eEEEEEeC----CCCCCEEEcC-CCcEEEe
Q psy4697 130 ISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGD--RVTLSLRG----PYEKMFSIND-SGHISIV 202 (383)
Q Consensus 130 I~V~DvNDn~P~f~~~~~~~~v~~~~~e~~~~g~~v~~v~A~D~D~g~--~i~ysi~~----~~~~~F~i~~-tG~i~l~ 202 (383)
|.|.|+|||+|.|..+.|.+.|+ |+.++|+.|+++.|+|+|.|. .++|+|.+ +...+|.|++ +|.|++.
T Consensus 2 ~~V~DvNDn~P~F~~~~y~~~v~----En~~~Gt~v~~v~A~D~D~g~n~~i~Y~i~~~~~~~~~~~F~Id~~tG~I~~~ 77 (114)
T 2ee0_A 2 SSGSSGNDNRPVFKEGQVEVHIP----ENAPVGTSVIQLHATDADIGSNAEIRYIFGAQVAPATKRLFALNNTTGLITVQ 77 (114)
T ss_dssp CCCCCCCCCCCCCSCSEEEEEEE----TTCCTTCEEEECCCCSCSSCCCSCCEEEECSSCCHHHHHHEEECTTTCEEEEC
T ss_pred CeEeeCCCCCCCcCCCcEEEEEE----CCCCCCCEEEEEEEEeCCCCCCcEEEEEEccCCCCCccceEEEeCCeeEEEEC
Confidence 46899999999999999999999 999999999999999999985 69999974 2346899997 9999987
Q ss_pred c-cCCCCcceEEEEEEEeeCCCCCceeEEEEEEEEe
Q psy4697 203 D-LSALNTSTIQLVVVATDTGNPPRQASVPAIMHFP 237 (383)
Q Consensus 203 ~-~~~~~~~~y~L~V~a~D~g~p~~sst~tv~I~v~ 237 (383)
+ ++++....|.|.|.|+|+|.|+ ++++|+|.|.
T Consensus 78 ~~LD~E~~~~y~l~V~A~D~g~~~--~~~~v~I~V~ 111 (114)
T 2ee0_A 78 RSLDREETAIHKVTVLASDGSSTP--ARATVTINVT 111 (114)
T ss_dssp SCCCTTTCSEEEEEEEEESSSSSC--EEEEEEEEEE
T ss_pred ccCCcccCcEEEEEEEEEECCCCc--eEEEEEEEEE
Confidence 6 4788889999999999999987 7788888883
No 38
>1ncg_A N-cadherin; cell adhesion protein; 2.10A {Mus musculus} SCOP: b.1.6.1 PDB: 1nch_A 1nci_A
Probab=99.79 E-value=2.2e-19 Score=146.20 Aligned_cols=93 Identities=22% Similarity=0.324 Sum_probs=72.8
Q ss_pred cEEEEEECCCCCCc--EEEEEEeEeCC-CCeeEEEEec-----CCCCCEEEcC-cccEEEcccCCcccCcEEEEEEEEec
Q psy4697 49 EYSVSALENLPVNY--VLLTVTTNKPR-DLRVKYWLSN-----DYGERFSISR-QGDISLMQCLDYETEDSYRFTVYATD 119 (383)
Q Consensus 49 ~y~~~V~En~~~gt--~v~~v~A~D~D-~~~v~Ysi~~-----~~~~~F~Id~-tG~I~~~~~LD~E~~~~y~~~V~A~D 119 (383)
.|.++|+||.++|+ .|+++ +.|.+ ++.++|+|.+ +..++|.|++ +|.|++.++||||....|.|+|.|+|
T Consensus 6 ~~~~~v~En~~~gt~~~v~~v-d~D~g~n~~i~Y~i~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~V~A~D 84 (110)
T 1ncg_A 6 IPPINLPENSRGPFPQELVRI-RSGRDKNLSLRYSVTGPGADQPPTGIFIINPISGQLSVTKPLDRELIARFHLRAHAVD 84 (110)
T ss_dssp CCCEEECSSCCCCSSEEEEEC-CCGGGGGSCCEEEEESBTTTBSSTTSEEECTTTCEEEECSCCCTTTCCEEEEEEEEEC
T ss_pred eeeEEEeCCCCCCCcEEEEEE-eCCCCCCCEEEEEEeCCCCCCCcCCEEEEECCCCEEEECCcCCcccCCeEEEEEEEEE
Confidence 46899999999999 46666 34444 3899999986 3467899996 99999999999999999999999999
Q ss_pred CC---ceeEEEEEEEEeecCCCCCcc
Q psy4697 120 TL---MTTSATVNISVVNVNDWDPRF 142 (383)
Q Consensus 120 ~~---~~s~~tV~I~V~DvNDn~P~f 142 (383)
+| ++++++|.|+|+|+|||+|+|
T Consensus 85 ~g~p~~~~~~~v~I~V~DvNDn~P~F 110 (110)
T 1ncg_A 85 INGNQVENPIDIVINVIDMNDNRPEF 110 (110)
T ss_dssp TTSCBCSCCEEEEEEEC---------
T ss_pred CCCCceeeEEEEEEEEEECCCCCCCC
Confidence 76 688999999999999999987
No 39
>1wyj_A Protocadherin beta 14; SS bond, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Mus musculus}
Probab=99.78 E-value=3.4e-20 Score=154.38 Aligned_cols=103 Identities=14% Similarity=0.082 Sum_probs=90.1
Q ss_pred cCcEEEEEECCCCCCcEEEEEEeEeCCC--Cee---EEEEec-CCCCCEEEcC-cccEEEcccCCcccC----cEEEEEE
Q psy4697 47 KNEYSVSALENLPVNYVLLTVTTNKPRD--LRV---KYWLSN-DYGERFSISR-QGDISLMQCLDYETE----DSYRFTV 115 (383)
Q Consensus 47 ~~~y~~~V~En~~~gt~v~~v~A~D~D~--~~v---~Ysi~~-~~~~~F~Id~-tG~I~~~~~LD~E~~----~~y~~~V 115 (383)
...|.++|+||.++|+.|++| |+|+|. +.+ +|+|.+ +...+|.||+ +|.|++.++||||.. ..|.+.|
T Consensus 10 ~~~~~~~V~E~~~~Gt~V~~v-a~D~d~~~~~i~~~~Y~i~~~~~~~~F~Id~~tG~i~~~~~LDRE~~c~~~~~y~l~v 88 (125)
T 1wyj_A 10 SATITYSVLEETDRGSLVGNL-AKDLGLSLRELITRGAQILSKGNKQLLQLEQKSGNLLLKEKLDREELCGSTNPCILHF 88 (125)
T ss_dssp CCCCCEEECSSCCTTCEEEES-TTTTTCCHHHHHHTTCEEECSSSSCSEEECSSSSEEEESSCCCSTTTCTTCSSCCBCC
T ss_pred CceEEEEEECCCCCCCEEEEE-EecCCCCCCceeeEEEEEecCCCCCeEEEECCccEEEECccccchhhcccCCcEEEEE
Confidence 356778999999999999999 999986 345 899976 5567999997 999999999999998 9999999
Q ss_pred EEecCCceeEEEEEEEEeecCCCCCcccCCceeEE
Q psy4697 116 YATDTLMTTSATVNISVVNVNDWDPRFRYPQYELF 150 (383)
Q Consensus 116 ~A~D~~~~s~~tV~I~V~DvNDn~P~f~~~~~~~~ 150 (383)
+|.++.....++|.|.|+|+|||+|+|..+.|.++
T Consensus 89 ~a~~~~p~~~~~V~I~V~DvNDN~P~F~~~~y~vs 123 (125)
T 1wyj_A 89 QVLLKSPVQFIQGEIQLQDVNDHAPEFMEDESGPS 123 (125)
T ss_dssp EEEETTTTEEECCCEEECCCCCCCCCCCCCCCCCC
T ss_pred EEEECCCCeEEEEEEEEEEccCCCCcCCCcEEEEe
Confidence 99986655688999999999999999999887653
No 40
>3k6d_A T-cadherin; cell adhesion; 1.80A {Xenopus laevis} PDB: 2v37_A
Probab=99.67 E-value=2.4e-16 Score=125.62 Aligned_cols=84 Identities=25% Similarity=0.296 Sum_probs=76.3
Q ss_pred EEEEEECCCCC--CcEEEEEEeEeCCCCeeEEEEec-----CCCCCEEEcC-cccEEEcccCCcccCcEEEEEEEEecCC
Q psy4697 50 YSVSALENLPV--NYVLLTVTTNKPRDLRVKYWLSN-----DYGERFSISR-QGDISLMQCLDYETEDSYRFTVYATDTL 121 (383)
Q Consensus 50 y~~~V~En~~~--gt~v~~v~A~D~D~~~v~Ysi~~-----~~~~~F~Id~-tG~I~~~~~LD~E~~~~y~~~V~A~D~~ 121 (383)
+.++|+||.++ |+.|++|+|+|+|. .++|+|.+ +..++|.||+ +|.|++.++||||....|.|+|.|+|+|
T Consensus 5 ~~~~V~En~~~~~g~~v~~v~A~D~D~-~i~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~V~A~D~g 83 (99)
T 3k6d_A 5 PSISIPENQRIPFPKIVGRVVVSDRIP-GSKIKLYGKGVDQEPKGIFKINENSGEVSVTKALDREAIPSYQLQVETTDEN 83 (99)
T ss_dssp CCEEEETTCCSCSSEEEEECBCSSCCT-TCEEEEESBTTTBSSTTSEEECTTTCEEEECSCCCTTTCCEEEEEEEEECTT
T ss_pred CcEEEeCCCCCCCCcEEEEEEEECCCC-cEEEEEecCcCCCCCCCEEEEECCceEEEECcCCCcccCceEEEEEEEEECC
Confidence 36899999999 99999999999997 99999975 3357899997 9999999999999999999999999986
Q ss_pred ---ceeEEEEEEEEee
Q psy4697 122 ---MTTSATVNISVVN 134 (383)
Q Consensus 122 ---~~s~~tV~I~V~D 134 (383)
+++.++|.|+|+|
T Consensus 84 ~~~l~~~~~v~I~V~D 99 (99)
T 3k6d_A 84 GKTIEGPVDLEILVID 99 (99)
T ss_dssp CCEEEEEEEEEEEEEC
T ss_pred CCceeeEEEEEEEEEC
Confidence 6778999999987
No 41
>3k6f_A T-cadherin; cell adhesion, calcium, cell membrane, cleavage on PAIR of basic residues, glycoprotein, GPI-anchor, lipoprotein, membrane; 1.81A {Mus musculus}
Probab=99.66 E-value=6.9e-16 Score=123.24 Aligned_cols=83 Identities=23% Similarity=0.318 Sum_probs=75.6
Q ss_pred EEEEECCCCC--CcEEEEEEeEeCCCCeeEEEEec-----CCCCCEEEcC-cccEEEcccCCcccCcEEEEEEEEecCC-
Q psy4697 51 SVSALENLPV--NYVLLTVTTNKPRDLRVKYWLSN-----DYGERFSISR-QGDISLMQCLDYETEDSYRFTVYATDTL- 121 (383)
Q Consensus 51 ~~~V~En~~~--gt~v~~v~A~D~D~~~v~Ysi~~-----~~~~~F~Id~-tG~I~~~~~LD~E~~~~y~~~V~A~D~~- 121 (383)
.++|+||.++ |+.|++|.|+|+|. .++|+|.+ +..++|.||+ +|.|++.++||||....|.|+|+|+|+|
T Consensus 7 ~~~V~EN~~~~~g~~v~~V~A~D~D~-~i~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~V~A~D~g~ 85 (100)
T 3k6f_A 7 PILIPENQRQPFPRDVGKVVDSDRPE-GSKFRLTGKGVDQDPKGTFRINENTGSVSVTRTLDRETIATYQLYVETTDASG 85 (100)
T ss_dssp CEEEETTCCSSSCEEEEECEETTCCT-TCEEEEEEBTTTBSSTTSEEECTTTCEEEECSCCCTTTCSEEEEEEEEECTTC
T ss_pred cEEEeCCCCCCCCcEEEEEEEEcCCC-CEEEEEeCCCCCCCcCCEEEEECCCCEEEECcccCCcCCCEEEEEEEEEECCC
Confidence 5799999998 89999999999998 89999975 2357899996 9999999999999999999999999987
Q ss_pred --ceeEEEEEEEEee
Q psy4697 122 --MTTSATVNISVVN 134 (383)
Q Consensus 122 --~~s~~tV~I~V~D 134 (383)
+++.++|.|+|+|
T Consensus 86 p~l~~~~~v~I~V~D 100 (100)
T 3k6f_A 86 KTLEGPVPLEVIVID 100 (100)
T ss_dssp CEEEEEEEEEEEEEC
T ss_pred CcccceEEEEEEEEC
Confidence 6788999999987
No 42
>3k6i_A T-cadherin; cell adhesion, alternative splicing, calcium, cell membrane, cleavage on PAIR of basic residues, glycoprotein, GPI-anchor, lipoprotein; 1.13A {Gallus gallus}
Probab=99.65 E-value=8.6e-16 Score=122.45 Aligned_cols=83 Identities=25% Similarity=0.319 Sum_probs=75.4
Q ss_pred EEEEECCCCCC--cEEEEEEeEeCCCCeeEEEEecC-----CCCCEEEcC-cccEEEcccCCcccCcEEEEEEEEecCC-
Q psy4697 51 SVSALENLPVN--YVLLTVTTNKPRDLRVKYWLSND-----YGERFSISR-QGDISLMQCLDYETEDSYRFTVYATDTL- 121 (383)
Q Consensus 51 ~~~V~En~~~g--t~v~~v~A~D~D~~~v~Ysi~~~-----~~~~F~Id~-tG~I~~~~~LD~E~~~~y~~~V~A~D~~- 121 (383)
.++|+||.++| +.|++|.|+|+|. .++|+|.+. ..+.|.||+ +|.|++.++||||....|.|+|+|+|+|
T Consensus 6 ~~~v~EN~~~g~~~~v~~V~A~D~D~-~i~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~A~D~g~ 84 (99)
T 3k6i_A 6 PILIPENQRPPFPRSVGKVIRSEGTE-GAKFRLSGKGVDQDPKGIFRINEISGDVSVTRPLDREAIANYELEVEVTDLSG 84 (99)
T ss_dssp CEEEETTCCSSSCEEEEECEETTCCS-SEEEEEESBTTTBSSTTSEEECTTTCEEEECSCCCTTTCCEEEEEEEEEETTS
T ss_pred cEEEeCCCCCCCCeEEEEEEEEcCCC-eEEEEEeCCCCCCCcCCEEEEECCCcEEEECcccCCccCCEEEEEEEEEECCC
Confidence 47899999997 8999999999998 999999852 346899997 9999999999999999999999999987
Q ss_pred --ceeEEEEEEEEee
Q psy4697 122 --MTTSATVNISVVN 134 (383)
Q Consensus 122 --~~s~~tV~I~V~D 134 (383)
+++.++|.|.|+|
T Consensus 85 ~~l~~~~~v~I~V~D 99 (99)
T 3k6i_A 85 KIIDGPVRLDISVID 99 (99)
T ss_dssp CEEEEEEEEEEEEEC
T ss_pred CceeeeEEEEEEEEC
Confidence 6788999999987
No 43
>2omz_B Epithelial-cadherin; leucine-rich-repeat, nvasion protein, IG-like domain, adhesi protein, cell invasion-cell adhesion complex; 1.60A {Homo sapiens} SCOP: b.1.6.1 PDB: 2omt_B 2omu_B 2omv_B 1o6s_B 2omy_B 2omx_B 3ff8_A 3ff7_A 2omw_B
Probab=99.62 E-value=1.2e-15 Score=123.00 Aligned_cols=85 Identities=22% Similarity=0.264 Sum_probs=74.7
Q ss_pred EEEEECCCC--CCcEEEEEEeEeCCCCeeEEEEecCC-----CCCEEEcC-cccEEEcccCCcccCcEEEEEEEEecCC-
Q psy4697 51 SVSALENLP--VNYVLLTVTTNKPRDLRVKYWLSNDY-----GERFSISR-QGDISLMQCLDYETEDSYRFTVYATDTL- 121 (383)
Q Consensus 51 ~~~V~En~~--~gt~v~~v~A~D~D~~~v~Ysi~~~~-----~~~F~Id~-tG~I~~~~~LD~E~~~~y~~~V~A~D~~- 121 (383)
.++|+||.+ .|..|++|.|.|..++.++|+|.+.. .++|.||+ +|.|++.++||||....|.|+|+|+|+|
T Consensus 10 ~~~V~En~~~~~~~~v~~v~Ad~g~N~~i~Ysi~~~~~~~~~~~~F~Id~~tG~I~~~~~LDrE~~~~y~l~V~A~D~g~ 89 (105)
T 2omz_B 10 PISCPENEKGPFPKNLVQIKSNKDKEGKVFYSITGQGADTPPVGVFIIERETGWLKVTEPLDRERIATYTLFSHAVSSNG 89 (105)
T ss_dssp CCCEESSCCSSSSEEEEECEEGGGGSSCCEEEEEEBTTTBSSTTSEEECTTTCEEEECSCCCTTTCCEEEEEEEEECTTS
T ss_pred CEEEeCCCCCCCCcEEEEEECCCCCCCeEEEEEeCCCCCCCccCEEEEeCCCCEEEECccCCcCCCCeEEEEEEEEECCC
Confidence 478999998 57899999996655699999998732 45899997 9999999999999999999999999976
Q ss_pred --ceeEEEEEEEEeec
Q psy4697 122 --MTTSATVNISVVNV 135 (383)
Q Consensus 122 --~~s~~tV~I~V~Dv 135 (383)
++++++|.|.|+|+
T Consensus 90 p~~~~~~~v~I~V~Dv 105 (105)
T 2omz_B 90 NAVEDPMEILITVTDQ 105 (105)
T ss_dssp CBSSCCEEEEEEEEC-
T ss_pred CceeeEEEEEEEEEeC
Confidence 67889999999996
No 44
>1zvn_A Mn-cadherin; strand dimer, ----; 2.16A {Gallus gallus}
Probab=99.61 E-value=2.5e-15 Score=119.70 Aligned_cols=84 Identities=26% Similarity=0.320 Sum_probs=75.1
Q ss_pred EEEEEECCCC--CCcEEEEEEeEeCC--CCeeEEEEecCC-CCCEEEcC-cccEEEcccCCcccCcEEEEEEEEecCC--
Q psy4697 50 YSVSALENLP--VNYVLLTVTTNKPR--DLRVKYWLSNDY-GERFSISR-QGDISLMQCLDYETEDSYRFTVYATDTL-- 121 (383)
Q Consensus 50 y~~~V~En~~--~gt~v~~v~A~D~D--~~~v~Ysi~~~~-~~~F~Id~-tG~I~~~~~LD~E~~~~y~~~V~A~D~~-- 121 (383)
+.++|+||.+ +|+.|++|+ +|+| +++++|+|.+.. .++|.||+ +|.|++.++||||+...|.|+|+|+|+|
T Consensus 6 ~~~~v~En~~~~~g~~v~~v~-~D~D~gNg~v~Ysi~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~V~A~D~G~~ 84 (99)
T 1zvn_A 6 NQFFVLEEYTGTDPLYVGKLH-SDMDRGDGSIKYILSGEGAGIVFTIDDTTGDIHAIQRLDREERSQYTLRAQALDRRTG 84 (99)
T ss_dssp CEEEEEGGGCSSSCEEEEECC-BTTCCSSSCEEEEEEETTBTTTEEECTTTCEEEECSCCCTTTCSEEEEEEEEEETTTC
T ss_pred cEEEEECCCCCCCCcEEEEEE-ECCCCCCCEEEEEEeCCCCCceEEEeCCCCCEEECeecCCccCCeEEEEEEEEECCCC
Confidence 5789999976 689999999 9999 489999998743 36899997 9999999999999999999999999975
Q ss_pred --ceeEEEEEEEEee
Q psy4697 122 --MTTSATVNISVVN 134 (383)
Q Consensus 122 --~~s~~tV~I~V~D 134 (383)
++++++|.|+|+|
T Consensus 85 p~l~~~~~v~I~V~D 99 (99)
T 1zvn_A 85 RPMEPESEFIIKIQD 99 (99)
T ss_dssp CBSSCCEEEEEEEEC
T ss_pred CCcceeEEEEEEEeC
Confidence 5788999999987
No 45
>1zxk_A Cadherin-8; strand dimer, cell adhesion; 2.00A {Mus musculus} PDB: 2a4c_A
Probab=99.59 E-value=4.1e-15 Score=118.25 Aligned_cols=84 Identities=26% Similarity=0.361 Sum_probs=74.5
Q ss_pred EEEEEECCCC--CCcEEEEEEeEeCCC--CeeEEEEecC-CCCCEEEcC-cccEEEcccCCcccCcEEEEEEEEecCC--
Q psy4697 50 YSVSALENLP--VNYVLLTVTTNKPRD--LRVKYWLSND-YGERFSISR-QGDISLMQCLDYETEDSYRFTVYATDTL-- 121 (383)
Q Consensus 50 y~~~V~En~~--~gt~v~~v~A~D~D~--~~v~Ysi~~~-~~~~F~Id~-tG~I~~~~~LD~E~~~~y~~~V~A~D~~-- 121 (383)
+.++|+||.+ +|+.|+++. +|+|. ++++|+|.++ ...+|.||+ +|.|++.++||||..+.|.|+|+|+|+|
T Consensus 5 ~~~~v~En~~~p~~~~v~~v~-~D~D~gN~~v~Ysi~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~A~D~g~~ 83 (98)
T 1zxk_A 5 NQMFVLEEFSGPEPILVGRLH-TDLDPGSKKIKYILSGDGAGTIFQINDITGDIHAIKRLDREEKAEYTLTAQAVDFETN 83 (98)
T ss_dssp CEEEECGGGCSSSCEEEEECC-BCCCCC--CEEEEEEETTBTTTEEECTTTCEEEECSCCCTTTCSEEEEEEEEEETTTC
T ss_pred ceEEEECCCCCCCCeEEEEEE-ECCCCCCCEEEEEEeCCCCCCEEEEECCccEEEECccCCCcCCCeEEEEEEEEECCCC
Confidence 5789999995 899999997 99995 7999999875 345899997 9999999999999999999999999975
Q ss_pred --ceeEEEEEEEEee
Q psy4697 122 --MTTSATVNISVVN 134 (383)
Q Consensus 122 --~~s~~tV~I~V~D 134 (383)
++++++|.|.|+|
T Consensus 84 ~~l~~~~~v~I~V~D 98 (98)
T 1zxk_A 84 KPLEPPSEFIIKVQD 98 (98)
T ss_dssp CBSSCCEEEEEEECC
T ss_pred CCcceeEEEEEEEEC
Confidence 5788999999987
No 46
>2yqg_A Desmoglein-2, HDGC; cadherin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.56 E-value=2.2e-15 Score=124.85 Aligned_cols=108 Identities=16% Similarity=0.150 Sum_probs=96.1
Q ss_pred cCCCCCcccCCceeEEEeccCCCCCCCCceEEEEEeeeCCCCC--eEEEEEeCC-----CCCCEEEcC-CCcEEEec-cC
Q psy4697 135 VNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGD--RVTLSLRGP-----YEKMFSIND-SGHISIVD-LS 205 (383)
Q Consensus 135 vNDn~P~f~~~~~~~~v~~~~~e~~~~g~~v~~v~A~D~D~g~--~i~ysi~~~-----~~~~F~i~~-tG~i~l~~-~~ 205 (383)
.+.++|.|..+.|.+.+. |++++|+.|++|. +|+|.|. .++|+|.+. ....|.|++ +|.|++.+ ++
T Consensus 5 ~~r~~p~f~~~~~~v~e~----e~~~~gt~v~~v~-~D~D~g~n~~i~Y~i~~~~~~~~~~~~F~Id~~tG~i~~~~~LD 79 (123)
T 2yqg_A 5 SSGQKRAWITAPVALREG----EDLSKKNPIAKIH-SDLAEERGLKITYKYTGKGITEPPFGIFVFNKDTGELNVTSILD 79 (123)
T ss_dssp SSCSCCSSCCCCEEEESS----SCCCSSCCCBCCC-CHHHHHHTCCCEEEEEEBTTTBSSCSSEEEETTTTEEEECSCCB
T ss_pred ccccCCccCCCCEEEEec----CCCCCCCEEEEEE-ECCCCCCCceEEEEEecCCCCCCcCCCEEEeCCcCEEEECcccC
Confidence 468999999999988888 8899999999999 6999875 799999842 457899998 99999876 47
Q ss_pred CCCcceEEEEEEEeeCCCCCceeEEEEEEEEeCCcccCccccc
Q psy4697 206 ALNTSTIQLVVVATDTGNPPRQASVPAIMHFPEAIVQQASSKL 248 (383)
Q Consensus 206 ~~~~~~y~L~V~a~D~g~p~~sst~tv~I~v~~~~~~~~p~~~ 248 (383)
++....|.|.|.|+|+|.|+++++++|.|.| .+.|+++|.|.
T Consensus 80 rE~~~~y~l~V~A~D~g~p~~~~~~~v~I~V-~DvNDn~P~F~ 121 (123)
T 2yqg_A 80 REETPFFLLTGYALDARGNNVEKPLELRIKV-LDINDNEPVFT 121 (123)
T ss_dssp TTTBSEEEEEEEEECTTCCEEEEEECCEEEE-ECTTCCCCCCC
T ss_pred cccCceEEEEEEEEECCCCceEEEEEEEEEE-EEcCCCCCEeC
Confidence 8889999999999999999999999999999 88999999885
No 47
>1wuz_A Pcdha4 protein, CNR-EC1; cadherin, heteronuclear protocadherin, cell adhesion; NMR {Mus musculus}
Probab=99.49 E-value=8.6e-15 Score=117.46 Aligned_cols=88 Identities=15% Similarity=0.158 Sum_probs=74.4
Q ss_pred CcEEEEEECCCCCCcEEEEEEeEeCCC-----CeeEEEEec-CCCCCEEEcC-cccEEEcccCCcccCc------EEEEE
Q psy4697 48 NEYSVSALENLPVNYVLLTVTTNKPRD-----LRVKYWLSN-DYGERFSISR-QGDISLMQCLDYETED------SYRFT 114 (383)
Q Consensus 48 ~~y~~~V~En~~~gt~v~~v~A~D~D~-----~~v~Ysi~~-~~~~~F~Id~-tG~I~~~~~LD~E~~~------~y~~~ 114 (383)
..|.++|+|+.++|+.|++| |.|+|. +.++|+|.+ +...+|.||+ +|.|++.++||||... .|.+.
T Consensus 3 ~~~~~~V~E~~~~Gt~Vg~v-a~D~~~~~~~~~~~~y~i~~~~~~~~F~Id~~tG~i~~~~~LDRE~~~~~~~~~~~~~~ 81 (103)
T 1wuz_A 3 SQIHYSIPEEAKHGTFVGRI-AQDLGLELTELVPRLFRVASKDRGDLLEVNLQNGILFVNSRIDREELCGRSAECSIHLE 81 (103)
T ss_dssp CEEEEEEESSCCTTCBCCCH-HHHHTCCHHHHTTTTBCCBCSSCSCSEEEETTTTEEEECSCCSHHHHCSSSSSCEEEEE
T ss_pred eeEEEEEECCCCCCCEEEEE-EeccCCCCcccccEEEEEEeCCCccEEEEECCeEEEEECCcCccccccCCCCcEEEEEE
Confidence 45788999999999999999 999885 368999976 4567999996 9999999999999852 67777
Q ss_pred EEEecCCceeEEEEEEEEeecCCC
Q psy4697 115 VYATDTLMTTSATVNISVVNVNDW 138 (383)
Q Consensus 115 V~A~D~~~~s~~tV~I~V~DvNDn 138 (383)
|.|.+. + ..++|.|.|+|+|||
T Consensus 82 v~~~~p-~-~~~~v~I~V~DiNDN 103 (103)
T 1wuz_A 82 VIVDRP-L-QVFHVEVEVRDINDN 103 (103)
T ss_dssp EEETTT-T-EEEEEEEEEECCSCC
T ss_pred EEECCC-C-EEEEEEEEEEEcCCC
Confidence 777543 3 488999999999998
No 48
>3k6d_A T-cadherin; cell adhesion; 1.80A {Xenopus laevis} PDB: 2v37_A
Probab=99.42 E-value=8.4e-13 Score=104.99 Aligned_cols=84 Identities=23% Similarity=0.327 Sum_probs=75.3
Q ss_pred eEEEeccCCCCCCC--CceEEEEEeeeCCCCCeEEEEEeC-----CCCCCEEEcC-CCcEEEec-cCCCCcceEEEEEEE
Q psy4697 148 ELFLPHIPLADLTP--GSVIGKVEAADGDKGDRVTLSLRG-----PYEKMFSIND-SGHISIVD-LSALNTSTIQLVVVA 218 (383)
Q Consensus 148 ~~~v~~~~~e~~~~--g~~v~~v~A~D~D~g~~i~ysi~~-----~~~~~F~i~~-tG~i~l~~-~~~~~~~~y~L~V~a 218 (383)
.+.|+ |+.++ |+.|++|.|+|+|. .++|+|.+ +..+.|.|++ +|.|++.+ ++++....|.|.|.|
T Consensus 6 ~~~V~----En~~~~~g~~v~~v~A~D~D~--~i~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~V~A 79 (99)
T 3k6d_A 6 SISIP----ENQRIPFPKIVGRVVVSDRIP--GSKIKLYGKGVDQEPKGIFKINENSGEVSVTKALDREAIPSYQLQVET 79 (99)
T ss_dssp CEEEE----TTCCSCSSEEEEECBCSSCCT--TCEEEEESBTTTBSSTTSEEECTTTCEEEECSCCCTTTCCEEEEEEEE
T ss_pred cEEEe----CCCCCCCCcEEEEEEEECCCC--cEEEEEecCcCCCCCCCEEEEECCceEEEECcCCCcccCceEEEEEEE
Confidence 57888 99999 99999999999997 89999974 2357899998 99999876 488889999999999
Q ss_pred eeCCCCCceeEEEEEEEEe
Q psy4697 219 TDTGNPPRQASVPAIMHFP 237 (383)
Q Consensus 219 ~D~g~p~~sst~tv~I~v~ 237 (383)
+|+|.|+++++++|.|.|.
T Consensus 80 ~D~g~~~l~~~~~v~I~V~ 98 (99)
T 3k6d_A 80 TDENGKTIEGPVDLEILVI 98 (99)
T ss_dssp ECTTCCEEEEEEEEEEEEE
T ss_pred EECCCCceeeEEEEEEEEE
Confidence 9999999999999999984
No 49
>1ncg_A N-cadherin; cell adhesion protein; 2.10A {Mus musculus} SCOP: b.1.6.1 PDB: 1nch_A 1nci_A
Probab=99.42 E-value=6.1e-13 Score=107.89 Aligned_cols=94 Identities=16% Similarity=0.220 Sum_probs=71.5
Q ss_pred ceeEEEeccCCCCCCCCce--EEEEEeeeCCCC--CeEEEEEeC-----CCCCCEEEcC-CCcEEEec-cCCCCcceEEE
Q psy4697 146 QYELFLPHIPLADLTPGSV--IGKVEAADGDKG--DRVTLSLRG-----PYEKMFSIND-SGHISIVD-LSALNTSTIQL 214 (383)
Q Consensus 146 ~~~~~v~~~~~e~~~~g~~--v~~v~A~D~D~g--~~i~ysi~~-----~~~~~F~i~~-tG~i~l~~-~~~~~~~~y~L 214 (383)
.|.++|+ |+.++|+. |+++ |.|.| ..++|+|.+ +..+.|.|++ +|.|++.+ ++++....|.|
T Consensus 6 ~~~~~v~----En~~~gt~~~v~~v---d~D~g~n~~i~Y~i~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l 78 (110)
T 1ncg_A 6 IPPINLP----ENSRGPFPQELVRI---RSGRDKNLSLRYSVTGPGADQPPTGIFIINPISGQLSVTKPLDRELIARFHL 78 (110)
T ss_dssp CCCEEEC----SSCCCCSSEEEEEC---CCGGGGGSCCEEEEESBTTTBSSTTSEEECTTTCEEEECSCCCTTTCCEEEE
T ss_pred eeeEEEe----CCCCCCCcEEEEEE---eCCCCCCCEEEEEEeCCCCCCCcCCEEEEECCCCEEEECCcCCcccCCeEEE
Confidence 3578899 99999995 5555 55554 479999984 3457999997 99999876 47888899999
Q ss_pred EEEEeeCCCCCceeEEEEEEEEeCCcccCcccc
Q psy4697 215 VVVATDTGNPPRQASVPAIMHFPEAIVQQASSK 247 (383)
Q Consensus 215 ~V~a~D~g~p~~sst~tv~I~v~~~~~~~~p~~ 247 (383)
.|.|+|+|.|+++++++|.|.| .+.|+++|.|
T Consensus 79 ~V~A~D~g~p~~~~~~~v~I~V-~DvNDn~P~F 110 (110)
T 1ncg_A 79 RAHAVDINGNQVENPIDIVINV-IDMNDNRPEF 110 (110)
T ss_dssp EEEEECTTSCBCSCCEEEEEEE-C---------
T ss_pred EEEEEECCCCceeeEEEEEEEE-EECCCCCCCC
Confidence 9999999999999999999999 8899998865
No 50
>3k6f_A T-cadherin; cell adhesion, calcium, cell membrane, cleavage on PAIR of basic residues, glycoprotein, GPI-anchor, lipoprotein, membrane; 1.81A {Mus musculus}
Probab=99.40 E-value=1.8e-12 Score=103.24 Aligned_cols=84 Identities=25% Similarity=0.370 Sum_probs=74.4
Q ss_pred eEEEeccCCCCCCC--CceEEEEEeeeCCCCCeEEEEEeC-----CCCCCEEEcC-CCcEEEec-cCCCCcceEEEEEEE
Q psy4697 148 ELFLPHIPLADLTP--GSVIGKVEAADGDKGDRVTLSLRG-----PYEKMFSIND-SGHISIVD-LSALNTSTIQLVVVA 218 (383)
Q Consensus 148 ~~~v~~~~~e~~~~--g~~v~~v~A~D~D~g~~i~ysi~~-----~~~~~F~i~~-tG~i~l~~-~~~~~~~~y~L~V~a 218 (383)
.+.|+ |+.+. |+.|++|.|+|+|. .++|+|.+ +..+.|.|++ +|.|++.+ ++++....|.|.|.|
T Consensus 7 ~~~V~----EN~~~~~g~~v~~V~A~D~D~--~i~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~V~A 80 (100)
T 3k6f_A 7 PILIP----ENQRQPFPRDVGKVVDSDRPE--GSKFRLTGKGVDQDPKGTFRINENTGSVSVTRTLDRETIATYQLYVET 80 (100)
T ss_dssp CEEEE----TTCCSSSCEEEEECEETTCCT--TCEEEEEEBTTTBSSTTSEEECTTTCEEEECSCCCTTTCSEEEEEEEE
T ss_pred cEEEe----CCCCCCCCcEEEEEEEEcCCC--CEEEEEeCCCCCCCcCCEEEEECCCCEEEECcccCCcCCCEEEEEEEE
Confidence 46788 89988 89999999999998 79999973 2347899998 99999876 488889999999999
Q ss_pred eeCCCCCceeEEEEEEEEe
Q psy4697 219 TDTGNPPRQASVPAIMHFP 237 (383)
Q Consensus 219 ~D~g~p~~sst~tv~I~v~ 237 (383)
+|+|.|+++++++|.|.|.
T Consensus 81 ~D~g~p~l~~~~~v~I~V~ 99 (100)
T 3k6f_A 81 TDASGKTLEGPVPLEVIVI 99 (100)
T ss_dssp ECTTCCEEEEEEEEEEEEE
T ss_pred EECCCCcccceEEEEEEEE
Confidence 9999999999999999984
No 51
>3k6i_A T-cadherin; cell adhesion, alternative splicing, calcium, cell membrane, cleavage on PAIR of basic residues, glycoprotein, GPI-anchor, lipoprotein; 1.13A {Gallus gallus}
Probab=99.39 E-value=3.1e-12 Score=101.71 Aligned_cols=84 Identities=24% Similarity=0.383 Sum_probs=74.2
Q ss_pred eEEEeccCCCCCCCC--ceEEEEEeeeCCCCCeEEEEEeCC-----CCCCEEEcC-CCcEEEec-cCCCCcceEEEEEEE
Q psy4697 148 ELFLPHIPLADLTPG--SVIGKVEAADGDKGDRVTLSLRGP-----YEKMFSIND-SGHISIVD-LSALNTSTIQLVVVA 218 (383)
Q Consensus 148 ~~~v~~~~~e~~~~g--~~v~~v~A~D~D~g~~i~ysi~~~-----~~~~F~i~~-tG~i~l~~-~~~~~~~~y~L~V~a 218 (383)
.+.|+ |+.+.| ..|++|.|+|+|. .++|+|.+. ..+.|.|++ +|.|++.+ ++++....|.|.|.|
T Consensus 6 ~~~v~----EN~~~g~~~~v~~V~A~D~D~--~i~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~A 79 (99)
T 3k6i_A 6 PILIP----ENQRPPFPRSVGKVIRSEGTE--GAKFRLSGKGVDQDPKGIFRINEISGDVSVTRPLDREAIANYELEVEV 79 (99)
T ss_dssp CEEEE----TTCCSSSCEEEEECEETTCCS--SEEEEEESBTTTBSSTTSEEECTTTCEEEECSCCCTTTCCEEEEEEEE
T ss_pred cEEEe----CCCCCCCCeEEEEEEEEcCCC--eEEEEEeCCCCCCCcCCEEEEECCCcEEEECcccCCccCCEEEEEEEE
Confidence 36788 899886 8899999999998 899999742 346899998 99999876 488889999999999
Q ss_pred eeCCCCCceeEEEEEEEEe
Q psy4697 219 TDTGNPPRQASVPAIMHFP 237 (383)
Q Consensus 219 ~D~g~p~~sst~tv~I~v~ 237 (383)
+|+|.|+++++++|.|.|.
T Consensus 80 ~D~g~~~l~~~~~v~I~V~ 98 (99)
T 3k6i_A 80 TDLSGKIIDGPVRLDISVI 98 (99)
T ss_dssp EETTSCEEEEEEEEEEEEE
T ss_pred EECCCCceeeeEEEEEEEE
Confidence 9999999999999999984
No 52
>1zvn_A Mn-cadherin; strand dimer, ----; 2.16A {Gallus gallus}
Probab=99.38 E-value=2.2e-12 Score=102.55 Aligned_cols=86 Identities=26% Similarity=0.417 Sum_probs=74.0
Q ss_pred eeEEEeccCCCCCC--CCceEEEEEeeeCCCCC-eEEEEEeCC-CCCCEEEcC-CCcEEEec-cCCCCcceEEEEEEEee
Q psy4697 147 YELFLPHIPLADLT--PGSVIGKVEAADGDKGD-RVTLSLRGP-YEKMFSIND-SGHISIVD-LSALNTSTIQLVVVATD 220 (383)
Q Consensus 147 ~~~~v~~~~~e~~~--~g~~v~~v~A~D~D~g~-~i~ysi~~~-~~~~F~i~~-tG~i~l~~-~~~~~~~~y~L~V~a~D 220 (383)
+.+.|+ |+.+ .|+.|++|. +|+|.|. .++|+|.+. ..+.|.|++ +|.|++.+ ++++....|.|.|.|+|
T Consensus 6 ~~~~v~----En~~~~~g~~v~~v~-~D~D~gNg~v~Ysi~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~V~A~D 80 (99)
T 1zvn_A 6 NQFFVL----EEYTGTDPLYVGKLH-SDMDRGDGSIKYILSGEGAGIVFTIDDTTGDIHAIQRLDREERSQYTLRAQALD 80 (99)
T ss_dssp CEEEEE----GGGCSSSCEEEEECC-BTTCCSSSCEEEEEEETTBTTTEEECTTTCEEEECSCCCTTTCSEEEEEEEEEE
T ss_pred cEEEEE----CCCCCCCCcEEEEEE-ECCCCCCCEEEEEEeCCCCCceEEEeCCCCCEEECeecCCccCCeEEEEEEEEE
Confidence 367788 8865 688999999 9999983 699999854 336899998 99999876 48888999999999999
Q ss_pred CC-CCCceeEEEEEEEEe
Q psy4697 221 TG-NPPRQASVPAIMHFP 237 (383)
Q Consensus 221 ~g-~p~~sst~tv~I~v~ 237 (383)
+| .|+++++++|.|.|.
T Consensus 81 ~G~~p~l~~~~~v~I~V~ 98 (99)
T 1zvn_A 81 RRTGRPMEPESEFIIKIQ 98 (99)
T ss_dssp TTTCCBSSCCEEEEEEEE
T ss_pred CCCCCCcceeEEEEEEEe
Confidence 99 599999999999984
No 53
>1zxk_A Cadherin-8; strand dimer, cell adhesion; 2.00A {Mus musculus} PDB: 2a4c_A
Probab=99.37 E-value=2.8e-12 Score=101.72 Aligned_cols=86 Identities=22% Similarity=0.422 Sum_probs=73.6
Q ss_pred eeEEEeccCCCCCC--CCceEEEEEeeeCCCCC-eEEEEEeCC-CCCCEEEcC-CCcEEEec-cCCCCcceEEEEEEEee
Q psy4697 147 YELFLPHIPLADLT--PGSVIGKVEAADGDKGD-RVTLSLRGP-YEKMFSIND-SGHISIVD-LSALNTSTIQLVVVATD 220 (383)
Q Consensus 147 ~~~~v~~~~~e~~~--~g~~v~~v~A~D~D~g~-~i~ysi~~~-~~~~F~i~~-tG~i~l~~-~~~~~~~~y~L~V~a~D 220 (383)
+.++|+ |+.+ .|+.|+++. +|+|.|. .++|+|.++ ..+.|.|++ +|.|++.+ ++++....|.|.|.|+|
T Consensus 5 ~~~~v~----En~~~p~~~~v~~v~-~D~D~gN~~v~Ysi~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~A~D 79 (98)
T 1zxk_A 5 NQMFVL----EEFSGPEPILVGRLH-TDLDPGSKKIKYILSGDGAGTIFQINDITGDIHAIKRLDREEKAEYTLTAQAVD 79 (98)
T ss_dssp CEEEEC----GGGCSSSCEEEEECC-BCCCCC--CEEEEEEETTBTTTEEECTTTCEEEECSCCCTTTCSEEEEEEEEEE
T ss_pred ceEEEE----CCCCCCCCeEEEEEE-ECCCCCCCEEEEEEeCCCCCCEEEEECCccEEEECccCCCcCCCeEEEEEEEEE
Confidence 457788 8884 899999997 9999983 699999854 345899998 99999876 48888999999999999
Q ss_pred CCC-CCceeEEEEEEEEe
Q psy4697 221 TGN-PPRQASVPAIMHFP 237 (383)
Q Consensus 221 ~g~-p~~sst~tv~I~v~ 237 (383)
+|. |+++++++|.|.|.
T Consensus 80 ~g~~~~l~~~~~v~I~V~ 97 (98)
T 1zxk_A 80 FETNKPLEPPSEFIIKVQ 97 (98)
T ss_dssp TTTCCBSSCCEEEEEEEC
T ss_pred CCCCCCcceeEEEEEEEE
Confidence 997 88999999999983
No 54
>2omz_B Epithelial-cadherin; leucine-rich-repeat, nvasion protein, IG-like domain, adhesi protein, cell invasion-cell adhesion complex; 1.60A {Homo sapiens} SCOP: b.1.6.1 PDB: 2omt_B 2omu_B 2omv_B 1o6s_B 2omy_B 2omx_B 3ff8_A 3ff7_A 2omw_B
Probab=99.26 E-value=1.5e-11 Score=98.83 Aligned_cols=86 Identities=15% Similarity=0.254 Sum_probs=71.6
Q ss_pred eEEEeccCCCCCC--CCceEEEEEeeeCCCCCeEEEEEeCCC-----CCCEEEcC-CCcEEEec-cCCCCcceEEEEEEE
Q psy4697 148 ELFLPHIPLADLT--PGSVIGKVEAADGDKGDRVTLSLRGPY-----EKMFSIND-SGHISIVD-LSALNTSTIQLVVVA 218 (383)
Q Consensus 148 ~~~v~~~~~e~~~--~g~~v~~v~A~D~D~g~~i~ysi~~~~-----~~~F~i~~-tG~i~l~~-~~~~~~~~y~L~V~a 218 (383)
.+.|+ |+.+ .|..|+++.| |.+....++|+|.+.. .+.|.|++ +|.|++.+ ++++....|+|.|.|
T Consensus 10 ~~~V~----En~~~~~~~~v~~v~A-d~g~N~~i~Ysi~~~~~~~~~~~~F~Id~~tG~I~~~~~LDrE~~~~y~l~V~A 84 (105)
T 2omz_B 10 PISCP----ENEKGPFPKNLVQIKS-NKDKEGKVFYSITGQGADTPPVGVFIIERETGWLKVTEPLDRERIATYTLFSHA 84 (105)
T ss_dssp CCCEE----SSCCSSSSEEEEECEE-GGGGSSCCEEEEEEBTTTBSSTTSEEECTTTCEEEECSCCCTTTCCEEEEEEEE
T ss_pred CEEEe----CCCCCCCCcEEEEEEC-CCCCCCeEEEEEeCCCCCCCccCEEEEeCCCCEEEECccCCcCCCCeEEEEEEE
Confidence 45678 8988 5789999999 4444457999998432 35899998 99999876 488889999999999
Q ss_pred eeCCCCCceeEEEEEEEEeC
Q psy4697 219 TDTGNPPRQASVPAIMHFPE 238 (383)
Q Consensus 219 ~D~g~p~~sst~tv~I~v~~ 238 (383)
+|+|.|+++++++|.|.|.+
T Consensus 85 ~D~g~p~~~~~~~v~I~V~D 104 (105)
T 2omz_B 85 VSSNGNAVEDPMEILITVTD 104 (105)
T ss_dssp ECTTSCBSSCCEEEEEEEEC
T ss_pred EECCCCceeeEEEEEEEEEe
Confidence 99999999999999999843
No 55
>1wyj_A Protocadherin beta 14; SS bond, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Mus musculus}
Probab=99.11 E-value=4.4e-11 Score=99.12 Aligned_cols=100 Identities=11% Similarity=0.179 Sum_probs=81.9
Q ss_pred CceeEEEeccCCCCCCCCceEEEEEeeeCCCCC-eE---EEEEe-CCCCCCEEEcC-CCcEEEec-cCCCCc----ceEE
Q psy4697 145 PQYELFLPHIPLADLTPGSVIGKVEAADGDKGD-RV---TLSLR-GPYEKMFSIND-SGHISIVD-LSALNT----STIQ 213 (383)
Q Consensus 145 ~~~~~~v~~~~~e~~~~g~~v~~v~A~D~D~g~-~i---~ysi~-~~~~~~F~i~~-tG~i~l~~-~~~~~~----~~y~ 213 (383)
..+.+.|+ |+.++|+.|++| |+|.|.+. .+ +|+|. ++..++|.|++ +|.|++.+ ++++.. ..|.
T Consensus 11 ~~~~~~V~----E~~~~Gt~V~~v-a~D~d~~~~~i~~~~Y~i~~~~~~~~F~Id~~tG~i~~~~~LDRE~~c~~~~~y~ 85 (125)
T 1wyj_A 11 ATITYSVL----EETDRGSLVGNL-AKDLGLSLRELITRGAQILSKGNKQLLQLEQKSGNLLLKEKLDREELCGSTNPCI 85 (125)
T ss_dssp CCCCEEEC----SSCCTTCEEEES-TTTTTCCHHHHHHTTCEEECSSSSCSEEECSSSSEEEESSCCCSTTTCTTCSSCC
T ss_pred ceEEEEEE----CCCCCCCEEEEE-EecCCCCCCceeeEEEEEecCCCCCeEEEECCccEEEECccccchhhcccCCcEE
Confidence 45677899 999999999999 99999875 35 89997 45667999998 99999876 477777 8899
Q ss_pred EEEEEeeCCCCCceeEEEEEEEEeCCcccCcccccCCCCc
Q psy4697 214 LVVVATDTGNPPRQASVPAIMHFPEAIVQQASSKLNSGTS 253 (383)
Q Consensus 214 L~V~a~D~g~p~~sst~tv~I~v~~~~~~~~p~~~~~~~~ 253 (383)
|.|.|.+. .| . ++++|.|.| .|.|+++|.|....+.
T Consensus 86 l~v~a~~~-~p-~-~~~~V~I~V-~DvNDN~P~F~~~~y~ 121 (125)
T 1wyj_A 86 LHFQVLLK-SP-V-QFIQGEIQL-QDVNDHAPEFMEDESG 121 (125)
T ss_dssp BCCEEEET-TT-T-EEECCCEEE-CCCCCCCCCCCCCCCC
T ss_pred EEEEEEEC-CC-C-eEEEEEEEE-EEccCCCCcCCCcEEE
Confidence 99999973 33 3 478889999 8999999999765543
No 56
>1wuz_A Pcdha4 protein, CNR-EC1; cadherin, heteronuclear protocadherin, cell adhesion; NMR {Mus musculus}
Probab=98.38 E-value=8.2e-08 Score=76.50 Aligned_cols=87 Identities=15% Similarity=0.219 Sum_probs=63.8
Q ss_pred ceeEEEeccCCCCCCCCceEEEEEeeeCCCCC----eEEEEEe-CCCCCCEEEcC-CCcEEEecc-CCCCc----c--eE
Q psy4697 146 QYELFLPHIPLADLTPGSVIGKVEAADGDKGD----RVTLSLR-GPYEKMFSIND-SGHISIVDL-SALNT----S--TI 212 (383)
Q Consensus 146 ~~~~~v~~~~~e~~~~g~~v~~v~A~D~D~g~----~i~ysi~-~~~~~~F~i~~-tG~i~l~~~-~~~~~----~--~y 212 (383)
.+.++|+ |+.++|+.|++| |.|+|.+. .++|+|. ++..++|.|++ +|.|++.+. +++.. . .|
T Consensus 4 ~~~~~V~----E~~~~Gt~Vg~v-a~D~~~~~~~~~~~~y~i~~~~~~~~F~Id~~tG~i~~~~~LDRE~~~~~~~~~~~ 78 (103)
T 1wuz_A 4 QIHYSIP----EEAKHGTFVGRI-AQDLGLELTELVPRLFRVASKDRGDLLEVNLQNGILFVNSRIDREELCGRSAECSI 78 (103)
T ss_dssp EEEEEEE----SSCCTTCBCCCH-HHHHTCCHHHHTTTTBCCBCSSCSCSEEEETTTTEEEECSCCSHHHHCSSSSSCEE
T ss_pred eEEEEEE----CCCCCCCEEEEE-EeccCCCCcccccEEEEEEeCCCccEEEEECCeEEEEECCcCccccccCCCCcEEE
Confidence 4677899 999999999999 99998753 5789986 45667999997 999998764 44432 1 45
Q ss_pred EEEEEEeeCCCCCceeEEEEEEEEeCCcccC
Q psy4697 213 QLVVVATDTGNPPRQASVPAIMHFPEAIVQQ 243 (383)
Q Consensus 213 ~L~V~a~D~g~p~~sst~tv~I~v~~~~~~~ 243 (383)
.+.|.+. .|. ..++|.|.| .|.|++
T Consensus 79 ~~~v~~~---~p~--~~~~v~I~V-~DiNDN 103 (103)
T 1wuz_A 79 HLEVIVD---RPL--QVFHVEVEV-RDINDN 103 (103)
T ss_dssp EEEEEET---TTT--EEEEEEEEE-ECCSCC
T ss_pred EEEEEEC---CCC--EEEEEEEEE-EEcCCC
Confidence 5666552 343 377888888 566653
No 57
>1op4_A Neural-cadherin; beta sandwich, cadherin-like domain, cell adhesion; NMR {Mus musculus} SCOP: b.1.6.1
Probab=95.53 E-value=0.047 Score=46.23 Aligned_cols=80 Identities=21% Similarity=0.342 Sum_probs=61.9
Q ss_pred CCCCCeeecCcEEEEEECCCCCCcEEEEEEeEeCCC-CeeEEEEecCCCCCEEEcCcccEEEcccCCcccCcEEEEEEEE
Q psy4697 39 SLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRD-LRVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYA 117 (383)
Q Consensus 39 Ndn~P~F~~~~y~~~V~En~~~gt~v~~v~A~D~D~-~~v~Ysi~~~~~~~F~Id~tG~I~~~~~LD~E~~~~y~~~V~A 117 (383)
-.+-|-|.+..|...++-+...|..++.|.-.|-.. ..+.|.-. ++ ..|.|+.+|.|++.+.+-.-... -.|.|.|
T Consensus 30 ~~C~pGF~~~~~~~~vp~~l~~g~~lgkV~F~dC~g~~~~~~~ss-Dp-~dFkV~~DGtVya~r~v~L~~~~-~~F~V~a 106 (159)
T 1op4_A 30 ALCKTGFPEDVYSAVLPKDVHEGQPLLNVKFSNCNRKRKVQYESS-EP-ADFKVDEDGTVYAVRSFPLTAEQ-AKFLIYA 106 (159)
T ss_dssp CCCCCBCCSCEEEECCCCSSCSSCCEEECCCBCCSSCCCEEEECC-CS-SEEEEETTTEEEEESCCSCSSSC-EEEEEEE
T ss_pred ccccCCcCcceeEEeccccccCCceeceeecccCCCCCceeEEcC-CC-CCeEEeCCCcEEEecceeecCCC-cEEEEEE
Confidence 457899999999778888889999999999888765 55767532 22 25999999999999987543322 3788999
Q ss_pred ecCC
Q psy4697 118 TDTL 121 (383)
Q Consensus 118 ~D~~ 121 (383)
.|..
T Consensus 107 ~D~~ 110 (159)
T 1op4_A 107 QDKE 110 (159)
T ss_dssp EETT
T ss_pred EcCC
Confidence 9853
No 58
>2yhg_A SDE_182CT, cellulose-binding protein; hydrolase, glycoside hydrolase; HET: BTB; 1.08A {Saccharophagus degradans}
Probab=95.13 E-value=0.22 Score=48.89 Aligned_cols=74 Identities=24% Similarity=0.380 Sum_probs=51.7
Q ss_pred CCceEEEEEe---eeCCCCCeEEEEEe---CC--CCCCEEEc-CC-CcEEEeccCCCCcceEEEEEEEeeCCCCCceeEE
Q psy4697 161 PGSVIGKVEA---ADGDKGDRVTLSLR---GP--YEKMFSIN-DS-GHISIVDLSALNTSTIQLVVVATDTGNPPRQASV 230 (383)
Q Consensus 161 ~g~~v~~v~A---~D~D~g~~i~ysi~---~~--~~~~F~i~-~t-G~i~l~~~~~~~~~~y~L~V~a~D~g~p~~sst~ 230 (383)
.|..| ++.| +|+| |+.++|+.. +. ......|. .+ ..+....+.......|.|.+.|+|.+.|.++++.
T Consensus 353 aG~tV-tLdAs~SsDPD-GD~LtY~W~q~~g~g~~~~~vtls~~~~~~~sft~P~~~~~~tl~f~LtVTD~~~p~lTs~~ 430 (437)
T 2yhg_A 353 AGSTV-SLDASGSSDPD-GDSLNYSWSHYGEADSYSGSVSISNSSSASANVQIPSNAGGKDIHILLTLRDNGSPNLYAYR 430 (437)
T ss_dssp TTCEE-EEECTTCBCTT-CCCEEEEEEECTTTSSCCSCCCEETTTSSEEEEECCTTCTTCEEEEEEEEEECSSSCCEEEE
T ss_pred CCCEE-EEEeeeeeCCC-CCeEEEEEEEeCCCCccccceEeecCCCceEEEEeCCCCCCcEEEEEEEEEeCCCCCccEEe
Confidence 45554 4555 4888 888999975 21 12245664 33 3454554444456889999999999999999999
Q ss_pred EEEEEE
Q psy4697 231 PAIMHF 236 (383)
Q Consensus 231 tv~I~v 236 (383)
.+.|+|
T Consensus 431 rViVtV 436 (437)
T 2yhg_A 431 RVVINV 436 (437)
T ss_dssp EEEEEE
T ss_pred EEEEEe
Confidence 999987
No 59
>1op4_A Neural-cadherin; beta sandwich, cadherin-like domain, cell adhesion; NMR {Mus musculus} SCOP: b.1.6.1
Probab=94.50 E-value=0.18 Score=42.67 Aligned_cols=80 Identities=19% Similarity=0.311 Sum_probs=63.1
Q ss_pred CCCCcccCCceeEEEeccCCCCCCCCceEEEEEeeeCCCCCeEEEEEeCCCCC-CEEEcCCCcEEEeccCCCCcceEEEE
Q psy4697 137 DWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRGPYEK-MFSINDSGHISIVDLSALNTSTIQLV 215 (383)
Q Consensus 137 Dn~P~f~~~~~~~~v~~~~~e~~~~g~~v~~v~A~D~D~g~~i~ysi~~~~~~-~F~i~~tG~i~l~~~~~~~~~~y~L~ 215 (383)
...|-|....|...++ .....|..+++|...|......+.|.-. +. .|.|+++|.+++.+...+....-.+.
T Consensus 31 ~C~pGF~~~~~~~~vp----~~l~~g~~lgkV~F~dC~g~~~~~~~ss---Dp~dFkV~~DGtVya~r~v~L~~~~~~F~ 103 (159)
T 1op4_A 31 LCKTGFPEDVYSAVLP----KDVHEGQPLLNVKFSNCNRKRKVQYESS---EPADFKVDEDGTVYAVRSFPLTAEQAKFL 103 (159)
T ss_dssp CCCCBCCSCEEEECCC----CSSCSSCCEEECCCBCCSSCCCEEEECC---CSSEEEEETTTEEEEESCCSCSSSCEEEE
T ss_pred cccCCcCcceeEEecc----ccccCCceeceeecccCCCCCceeEEcC---CCCCeEEeCCCcEEEecceeecCCCcEEE
Confidence 3568898888866677 7888999999999999975567888743 34 79999999999887655555566899
Q ss_pred EEEeeCCC
Q psy4697 216 VVATDTGN 223 (383)
Q Consensus 216 V~a~D~g~ 223 (383)
|.|.|...
T Consensus 104 V~a~D~~t 111 (159)
T 1op4_A 104 IYAQDKET 111 (159)
T ss_dssp EEEEETTT
T ss_pred EEEEcCCC
Confidence 99999543
No 60
>3pdd_A Glycoside hydrolase, family 9; CBHA, beta-sandwich, cellulosome, unknown function; 1.72A {Clostridium thermocellum} PDB: 3pdg_A
Probab=93.10 E-value=3.7 Score=35.41 Aligned_cols=113 Identities=18% Similarity=0.149 Sum_probs=61.6
Q ss_pred CCeEEEEEEEEECCCCCceEEEEEEEEEeeCCCCCCeeecCcEEEEEECCCC---CC-cEEEEEEeEeCCC--CeeEEEE
Q psy4697 8 LQPITLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLP---VN-YVLLTVTTNKPRD--LRVKYWL 81 (383)
Q Consensus 8 ~~~y~l~V~a~D~g~~~~~s~~~v~V~V~DvNdn~P~F~~~~y~~~V~En~~---~g-t~v~~v~A~D~D~--~~v~Ysi 81 (383)
.-.|+|+++|.|..+. .+....+.|.|.+ ..||.- .+.-+.+.. .| ..-.+..|.|.|. ..+.|.+
T Consensus 60 ~G~htlta~A~D~aGn-~s~s~~v~vtV~~--~~~Ptv-----~itsP~~g~~~~~~~~vtl~~~AsD~~g~V~~Ve~~~ 131 (190)
T 3pdd_A 60 VGAYNLKAVAVLSDGR-RIESPVTPVLVKV--IVKPTV-----KLTAPKSNVVAYGNEFLKITATASDSDGKISRVDFLV 131 (190)
T ss_dssp SEEEEEEEEEEETTSC-EEECCCEEEEEEC--CCCCEE-----EEEECCTTCCCBTTSEEEEEEEEECSSSCEEEEEEEE
T ss_pred CccEEEEEEEEECCCC-EeeecceeEEecc--CCCCce-----eecCCCCCcEEecCCeEEEEEEEECCCCcEEEEEEEE
Confidence 3579999999996532 2233346666665 346643 244444432 23 4556778888775 4455544
Q ss_pred ecCCCCCEEEcCcccEEEcccCCcccCcEEEEEEEEecC-C-ceeEEEEEEEEee
Q psy4697 82 SNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDT-L-MTTSATVNISVVN 134 (383)
Q Consensus 82 ~~~~~~~F~Id~tG~I~~~~~LD~E~~~~y~~~V~A~D~-~-~~s~~tV~I~V~D 134 (383)
.+ . ...-+..+.....-.. ....|.|++.|+|. | .+....|.|.|.+
T Consensus 132 dg--~-~v~t~t~~~y~~~~~~---~~G~~tl~a~A~D~aGn~s~s~~vtvtv~~ 180 (190)
T 3pdd_A 132 DG--E-VIGSDREAPYEYEWKA---VEGNHEISVIAYDDDDAASTPDSVKIFVKQ 180 (190)
T ss_dssp TT--E-EEEEECSSSEEEEEEC---CSEEEEEEEEEEETTCCBCCCEEEEEEEBC
T ss_pred CC--E-EEecccCCCEEEEEec---CCeeEEEEEEEEECCCCEEecceEEEEECC
Confidence 32 1 1111111111111111 46789999999995 3 3445667777654
No 61
>3rb5_A Na/Ca exchange protein; CBD12, calcium binding and regulation, metal binding protein; 2.35A {Drosophila melanogaster} PDB: 3rb7_A 3e9u_A
Probab=91.34 E-value=8.4 Score=35.73 Aligned_cols=135 Identities=12% Similarity=0.180 Sum_probs=70.9
Q ss_pred CCCCCeeecCcEEEEEECCCCCCcEEEEEEeEeCCC--CeeEEEEecC---C-CCCEEEcCcccEEEc----------cc
Q psy4697 39 SLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRD--LRVKYWLSND---Y-GERFSISRQGDISLM----------QC 102 (383)
Q Consensus 39 Ndn~P~F~~~~y~~~V~En~~~gt~v~~v~A~D~D~--~~v~Ysi~~~---~-~~~F~Id~tG~I~~~----------~~ 102 (383)
+|++..|....-...|.|+. |+.-.+|.-+.+-. ..|.|...+. . .+|-.. +|.|... ..
T Consensus 6 dd~~g~i~F~~~~y~V~E~~--g~v~vtV~R~g~~~~~vtV~y~T~~GTA~ag~Dy~~~--~gtl~F~~Get~kti~V~I 81 (298)
T 3rb5_A 6 ADDPIRMYFEPGHYTVMENC--GEFEVRVVRRGDISTYASVEYETQDGTASAGTDFVGR--KGLLSFPPGVDEQRFRIEV 81 (298)
T ss_dssp -----CEEESSSEEEEETTS--CCEECCEEECSCCSSCEEEEEEEEESSSCBTTTBCCC--EEEEEECTTCCEECCEECB
T ss_pred CCCceEEEEeCCEEEEecCc--eEEEEEEEEECCCCccEEEEEEeeCCccCCCCCcccc--ceEEEECCCceEEEEEEEE
Confidence 56777777777677899986 55555554433222 5678876541 1 111111 2222221 12
Q ss_pred C---CcccCcEEEEEEEEecCC--ceeEEEEEEEEeecCCCCCcccCCceeEEEeccCCCCCCCCceEEEEEeeeCCCCC
Q psy4697 103 L---DYETEDSYRFTVYATDTL--MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGD 177 (383)
Q Consensus 103 L---D~E~~~~y~~~V~A~D~~--~~s~~tV~I~V~DvNDn~P~f~~~~~~~~v~~~~~e~~~~g~~v~~v~A~D~D~g~ 177 (383)
+ -+|....|.+.+..-.++ +....+.+|.|.| ||++|.|....-...+. |+. |....+|.-.-.-.|.
T Consensus 82 ~dD~~~E~dEtF~v~Ls~p~~~a~lg~~~~atvtI~d-dD~~g~~~f~~~~~~V~----E~~--g~~~~~V~Rs~~~~g~ 154 (298)
T 3rb5_A 82 IDDDVFEEDECFYIRLFNPSEGVKLAVPMIATVMILD-DDHAGIFAFTDSVFEIT----ESV--GRFELKVMRYSGARGT 154 (298)
T ss_dssp CCCSSCCCCEEEEEEEECCCTTCCBCSCSEEEEEEEC-CCCCCEEECSCSEEEEC----TTC--CCEEEEEEEESCCCSC
T ss_pred eCCCCccCcEEEEEEEeCCCCCcEECCCceEEEEEec-cccccccccccccEEee----cCC--ceEEEEEEEEecCCCC
Confidence 2 234455566555443222 3344456667777 56689876655566777 664 6666666666554454
Q ss_pred -eEEEEEe
Q psy4697 178 -RVTLSLR 184 (383)
Q Consensus 178 -~i~ysi~ 184 (383)
.+.|...
T Consensus 155 vtV~~~T~ 162 (298)
T 3rb5_A 155 VIVPYWTE 162 (298)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEec
Confidence 6777754
No 62
>2klu_A T-cell surface glycoprotein CD4; cell membrane, disulfide bond, HOST- virus interaction, immune response, immunoglobulin domain, lipoprotein; NMR {Homo sapiens}
Probab=91.12 E-value=0.16 Score=35.85 Aligned_cols=33 Identities=21% Similarity=0.265 Sum_probs=19.9
Q ss_pred CceeeehhhHHHHHHHHHHHHHHh-hheeecCCCC
Q psy4697 252 TSSTVLIILGVVLIVLGFVIILLI-LYIHKNKHTK 285 (383)
Q Consensus 252 ~~~~li~~l~~i~~lL~l~~~~l~-~~~~r~~~~~ 285 (383)
+..++ ++||+++++|+++.+.++ ..+|||++++
T Consensus 7 ~p~~L-ivlGg~~~lll~~glcI~ccvkcrhRrrq 40 (70)
T 2klu_A 7 GSMAL-IVLGGVAGLLLFIGLGIFFSVRSRHRRRQ 40 (70)
T ss_dssp CSSHH-HHHHHHHHHHHHHHHHHHHHHHSSCCSSS
T ss_pred hHHHH-HHHhHHHHHHHHHHHHHHHhhHHHHHHHH
Confidence 34444 788988887777655544 4445544443
No 63
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=91.09 E-value=0.17 Score=33.08 Aligned_cols=8 Identities=38% Similarity=0.953 Sum_probs=3.0
Q ss_pred hHHHHHHH
Q psy4697 260 LGVVLIVL 267 (383)
Q Consensus 260 l~~i~~lL 267 (383)
++++++++
T Consensus 18 VgGv~~~~ 25 (44)
T 2ks1_B 18 VGALLLLL 25 (44)
T ss_dssp HHHHHHHH
T ss_pred hHHHHHHH
Confidence 33333333
No 64
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=90.26 E-value=0.17 Score=33.02 Aligned_cols=8 Identities=13% Similarity=0.310 Sum_probs=3.1
Q ss_pred hhheeecC
Q psy4697 275 ILYIHKNK 282 (383)
Q Consensus 275 ~~~~~r~~ 282 (383)
+++++||+
T Consensus 32 ~~~~RRR~ 39 (44)
T 2jwa_A 32 GILIKRRQ 39 (44)
T ss_dssp HHHHHHHC
T ss_pred Hhheehhh
Confidence 33334443
No 65
>2iep_A Muscle-specific kinase receptor; beta-sandwich, signaling protein,transferase; 2.21A {Rattus norvegicus}
Probab=84.98 E-value=14 Score=30.02 Aligned_cols=176 Identities=11% Similarity=0.144 Sum_probs=87.3
Q ss_pred CCeeecCcEEEEEECCCCCCcEEEEEEeEeCCCCeeEEEEec----CCCCCEEEcCcccEEEcccCCcccCcEEEEEEEE
Q psy4697 42 ELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSN----DYGERFSISRQGDISLMQCLDYETEDSYRFTVYA 117 (383)
Q Consensus 42 ~P~F~~~~y~~~V~En~~~gt~v~~v~A~D~D~~~v~Ysi~~----~~~~~F~Id~tG~I~~~~~LD~E~~~~y~~~V~A 117 (383)
+|.|....-...+.|+.. ..+.-.+.......+.+...+ .....+.+..+|.......+..+....|...+.-
T Consensus 7 ~P~i~~~~~~~~~~~G~~---v~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~ 83 (192)
T 2iep_A 7 APVITTPLETVDALVEEV---ATFMCAVESYPQPEISWTRNKILIKLFDTRYSIRENGQLLTILSVEDSDDGIYCCTANN 83 (192)
T ss_dssp EEEESSCCCEEEEETTSC---EEEECCEEEESCCEEEEEETTEECCTTCTTEEEEGGGTEEEESSCCGGGCEEEEEEEEC
T ss_pred CceeecCccceeeeCCCc---EEEEeeCCCCCCCeEEEEECCEEccccCccEEEcCCccEEEEcCCCcccCeEEEEEEEc
Confidence 678887777777777642 222222321111344443322 2244567766555444566777878888887764
Q ss_pred ecCC-ceeEEEEEEEEeecCCCCCcccCCceeEEEeccCCCCCCCCceEEEEEeeeCCCCCeEEEEEeC---CCCCCEEE
Q psy4697 118 TDTL-MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLRG---PYEKMFSI 193 (383)
Q Consensus 118 ~D~~-~~s~~tV~I~V~DvNDn~P~f~~~~~~~~v~~~~~e~~~~g~~v~~v~A~D~D~g~~i~ysi~~---~~~~~F~i 193 (383)
..+. ......+.|.. +|.+..+.....+. +.. .......+. ......+.+...+ .....+.+
T Consensus 84 ~~~~~~~~~~~l~v~~------~p~~~~~~~~~~~~----~g~---~~~l~C~~~-g~p~~~v~W~~~~~~~~~~~~~~~ 149 (192)
T 2iep_A 84 GVGGAVESCGALQVKM------KPKITRPPINVKII----EGL---KAVLPCTTM-GNPKPSVSWIKGDSALRENSRIAV 149 (192)
T ss_dssp SSSCCEEEEEEEEEEE------EEEEEECCCCEEEE----TTS---CEEECCEEE-EESCCEEEEEETTEECCCCSSEEE
T ss_pred CCCceeEeEEEEEEEe------CCccccCCcceEEe----CCC---cEEEEEEEe-ccCCceEEEEeCCEEccCCCcEEE
Confidence 3333 23334444432 45555443333344 221 111112221 1111234443322 23345666
Q ss_pred cCCCcEEEeccCCCCcceEEEEEEEeeCCCCCceeEEEEEEEE
Q psy4697 194 NDSGHISIVDLSALNTSTIQLVVVATDTGNPPRQASVPAIMHF 236 (383)
Q Consensus 194 ~~tG~i~l~~~~~~~~~~y~L~V~a~D~g~p~~sst~tv~I~v 236 (383)
..+|.+.+......+.+.|...+. ...+...+.++.|.|.+
T Consensus 150 ~~~~~L~i~~~~~~d~G~Y~C~a~--n~~g~~~s~~~~l~V~~ 190 (192)
T 2iep_A 150 LESGSLRIHNVQKEDAGQYRCVAK--NSLGTAYSKLVKLEVEV 190 (192)
T ss_dssp CTTSCEEESSCCGGGCEEEEEEEE--ETTEEEECCCEEEEEEC
T ss_pred ecCCcEEEecCChhhCEEEEEEEE--cCCCcEEEEEEEEEEEe
Confidence 667788777766677888877654 33322233445555544
No 66
>3pdd_A Glycoside hydrolase, family 9; CBHA, beta-sandwich, cellulosome, unknown function; 1.72A {Clostridium thermocellum} PDB: 3pdg_A
Probab=83.54 E-value=20 Score=30.62 Aligned_cols=115 Identities=14% Similarity=0.127 Sum_probs=63.5
Q ss_pred cCcEEEEEEEEecC-CceeE-EEEEEEEeecCCCCCcccCCceeEEEeccCCCCC-C--CCc-eEEEEEeeeCCCC-CeE
Q psy4697 107 TEDSYRFTVYATDT-LMTTS-ATVNISVVNVNDWDPRFRYPQYELFLPHIPLADL-T--PGS-VIGKVEAADGDKG-DRV 179 (383)
Q Consensus 107 ~~~~y~~~V~A~D~-~~~s~-~tV~I~V~DvNDn~P~f~~~~~~~~v~~~~~e~~-~--~g~-~v~~v~A~D~D~g-~~i 179 (383)
....|.|++.|+|. |..+. ..+.|.|.+ ..+|.. .+..| .+. . .|. +-.+..|.|.|.+ ..+
T Consensus 59 ~~G~htlta~A~D~aGn~s~s~~v~vtV~~--~~~Ptv-----~itsP----~~g~~~~~~~~vtl~~~AsD~~g~V~~V 127 (190)
T 3pdd_A 59 AVGAYNLKAVAVLSDGRRIESPVTPVLVKV--IVKPTV-----KLTAP----KSNVVAYGNEFLKITATASDSDGKISRV 127 (190)
T ss_dssp CSEEEEEEEEEEETTSCEEECCCEEEEEEC--CCCCEE-----EEEEC----CTTCCCBTTSEEEEEEEEECSSSCEEEE
T ss_pred CCccEEEEEEEEECCCCEeeecceeEEecc--CCCCce-----eecCC----CCCcEEecCCeEEEEEEEECCCCcEEEE
Confidence 35689999999995 44433 457777776 346653 23333 222 1 243 4456777877632 256
Q ss_pred EEEEeCCCCCCEEEcCCCcE-EEeccCCCCcceEEEEEEEeeCCCCCceeEEEEEEEEeCC
Q psy4697 180 TLSLRGPYEKMFSINDSGHI-SIVDLSALNTSTIQLVVVATDTGNPPRQASVPAIMHFPEA 239 (383)
Q Consensus 180 ~ysi~~~~~~~F~i~~tG~i-~l~~~~~~~~~~y~L~V~a~D~g~p~~sst~tv~I~v~~~ 239 (383)
.|.+.|. ...-+.++.. +.... ..+.|.|.++|+|..+-. +....|.|.|.++
T Consensus 128 e~~~dg~---~v~t~t~~~y~~~~~~---~~G~~tl~a~A~D~aGn~-s~s~~vtvtv~~~ 181 (190)
T 3pdd_A 128 DFLVDGE---VIGSDREAPYEYEWKA---VEGNHEISVIAYDDDDAA-STPDSVKIFVKQA 181 (190)
T ss_dssp EEEETTE---EEEEECSSSEEEEEEC---CSEEEEEEEEEEETTCCB-CCCEEEEEEEBCG
T ss_pred EEEECCE---EEecccCCCEEEEEec---CCeeEEEEEEEEECCCCE-EecceEEEEECCc
Confidence 6666431 1111111111 11111 568999999999985432 3455677777443
No 67
>2k9y_A Ephrin type-A receptor 2; receptor tyrosine kinase, membrane protein, dimeric transmembrane domain, ephrin receptor, ATP-binding, glycoprotein; NMR {Homo sapiens}
Probab=82.83 E-value=0.98 Score=28.74 Aligned_cols=8 Identities=25% Similarity=0.762 Sum_probs=3.5
Q ss_pred hhheeecC
Q psy4697 275 ILYIHKNK 282 (383)
Q Consensus 275 ~~~~~r~~ 282 (383)
++++|||+
T Consensus 33 ~~~~~rRr 40 (41)
T 2k9y_A 33 GFFIHRRR 40 (41)
T ss_dssp HHSSSSSC
T ss_pred heeEeeec
Confidence 34445543
No 68
>2yhg_A SDE_182CT, cellulose-binding protein; hydrolase, glycoside hydrolase; HET: BTB; 1.08A {Saccharophagus degradans}
Probab=72.90 E-value=18 Score=35.36 Aligned_cols=62 Identities=16% Similarity=0.150 Sum_probs=41.9
Q ss_pred EeCCCCeeEEEEec--CC---CCCEEEc-C-cccEEEcccCCcccCcEEEEEEEEecC---CceeEEEEEEEE
Q psy4697 70 NKPRDLRVKYWLSN--DY---GERFSIS-R-QGDISLMQCLDYETEDSYRFTVYATDT---LMTTSATVNISV 132 (383)
Q Consensus 70 ~D~D~~~v~Ysi~~--~~---~~~F~Id-~-tG~I~~~~~LD~E~~~~y~~~V~A~D~---~~~s~~tV~I~V 132 (383)
+|||+..++|+=.- .+ ...+.|. . ...+...-+-+ +....|.|++.++|+ ++++..+|.|+|
T Consensus 365 sDPDGD~LtY~W~q~~g~g~~~~~vtls~~~~~~~sft~P~~-~~~~tl~f~LtVTD~~~p~lTs~~rViVtV 436 (437)
T 2yhg_A 365 SDPDGDSLNYSWSHYGEADSYSGSVSISNSSSASANVQIPSN-AGGKDIHILLTLRDNGSPNLYAYRRVVINV 436 (437)
T ss_dssp BCTTCCCEEEEEEECTTTSSCCSCCCEETTTSSEEEEECCTT-CTTCEEEEEEEEEECSSSCCEEEEEEEEEE
T ss_pred eCCCCCeEEEEEEEeCCCCccccceEeecCCCceEEEEeCCC-CCCcEEEEEEEEEeCCCCCccEEeEEEEEe
Confidence 59999889997543 22 1245664 3 33444444433 456899999999997 478888888877
No 69
>2l8s_A Integrin alpha-1; transmembrane region, detergent micelle, CE adhesion; NMR {Homo sapiens}
Probab=72.63 E-value=3 Score=28.31 Aligned_cols=24 Identities=21% Similarity=0.373 Sum_probs=11.8
Q ss_pred ehhhHHHHHHHHHHHHHHhhheee
Q psy4697 257 LIILGVVLIVLGFVIILLILYIHK 280 (383)
Q Consensus 257 i~~l~~i~~lL~l~~~~l~~~~~r 280 (383)
+++++++.++|++.++++++++|-
T Consensus 11 iIi~svl~GLLLL~Lii~~LwK~G 34 (54)
T 2l8s_A 11 VILLSAFAGLLLLMLLILALWKIG 34 (54)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcC
Confidence 344444555555555545554443
No 70
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=72.21 E-value=2.7 Score=27.34 Aligned_cols=19 Identities=26% Similarity=0.280 Sum_probs=11.2
Q ss_pred ehhhHHHHHHHHHHHHHHh
Q psy4697 257 LIILGVVLIVLGFVIILLI 275 (383)
Q Consensus 257 i~~l~~i~~lL~l~~~~l~ 275 (383)
.|+.+.+-+++++++++++
T Consensus 12 ~IA~gVVgGv~~~~ii~~~ 30 (44)
T 2ks1_B 12 SIATGMVGALLLLLVVALG 30 (44)
T ss_dssp SSTHHHHHHHHHHHHHHHH
T ss_pred eEEeehhHHHHHHHHHHHH
Confidence 3455555556766666554
No 71
>2knc_A Integrin alpha-IIB; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}
Probab=72.09 E-value=4.7 Score=27.41 Aligned_cols=24 Identities=21% Similarity=0.373 Sum_probs=12.2
Q ss_pred ehhhHHHHHHHHHHHHHHhhheee
Q psy4697 257 LIILGVVLIVLGFVIILLILYIHK 280 (383)
Q Consensus 257 i~~l~~i~~lL~l~~~~l~~~~~r 280 (383)
+++++++.++|++.++++++++|-
T Consensus 14 iIi~svl~GLllL~li~~~LwK~G 37 (54)
T 2knc_A 14 WVLVGVLGGLLLLTILVLAMWKVG 37 (54)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcC
Confidence 344555555555555555555443
No 72
>3pe9_A Fibronectin(III)-like module; CBHA, beta-sandwich, cellulosome, unknown function; 1.69A {Clostridium thermocellum}
Probab=69.29 E-value=17 Score=27.72 Aligned_cols=63 Identities=21% Similarity=0.282 Sum_probs=37.6
Q ss_pred CcEEEEEEeEeCCC--CeeEEEEec-----CCCCCEEEcCcccEEEcccCCcccCcEEEEEEEEecC-C-ceeEEEEEEE
Q psy4697 61 NYVLLTVTTNKPRD--LRVKYWLSN-----DYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDT-L-MTTSATVNIS 131 (383)
Q Consensus 61 gt~v~~v~A~D~D~--~~v~Ysi~~-----~~~~~F~Id~tG~I~~~~~LD~E~~~~y~~~V~A~D~-~-~~s~~tV~I~ 131 (383)
+.+.....|.|.|. .+|.|.+.+ +....|+.. ++-. ...|.|++.|+|. | ......|.|.
T Consensus 17 ~~v~i~a~A~D~dg~V~kVef~vdg~~vg~dt~apy~~~----------w~~~-~G~htl~a~AtD~~G~~~tS~~v~vt 85 (98)
T 3pe9_A 17 EFLKITATASDSDGKISRVDFLVDGEVIGSDREAPYEYE----------WKAV-EGNHEISVIAYDDDDAASTPDSVKIF 85 (98)
T ss_dssp SEEEEEEEECCSSSCEEEEEEEETTEEEEEECSSSEEEE----------EECC-SEEEEEEEEEEETTCCBCCCEEEEEE
T ss_pred CEEEEEEEEEeCCCCEEEEEEEECCEEecccccCCEEEE----------EEcC-CccEEEEEEEEECCCCEEeeeEEEEE
Confidence 44567778888775 567777643 111122211 1111 5789999999995 3 3446677777
Q ss_pred Eee
Q psy4697 132 VVN 134 (383)
Q Consensus 132 V~D 134 (383)
|.+
T Consensus 86 V~~ 88 (98)
T 3pe9_A 86 VKQ 88 (98)
T ss_dssp EEC
T ss_pred ECc
Confidence 764
No 73
>2k1a_A Integrin alpha-IIB; single-PASS transmembrane segment, alternative splicing, calcium, cell adhesion, cleavage on PAIR of basic residues; NMR {Homo sapiens} PDB: 2k9j_A
Probab=67.41 E-value=4.7 Score=25.91 Aligned_cols=24 Identities=21% Similarity=0.373 Sum_probs=12.8
Q ss_pred ehhhHHHHHHHHHHHHHHhhheee
Q psy4697 257 LIILGVVLIVLGFVIILLILYIHK 280 (383)
Q Consensus 257 i~~l~~i~~lL~l~~~~l~~~~~r 280 (383)
++.++++.++|++.++.+++++|-
T Consensus 12 iIi~s~l~GLllL~li~~~LwK~G 35 (42)
T 2k1a_A 12 WVLVGVLGGLLLLTILVLAMWKVG 35 (42)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcC
Confidence 445555555665555555555443
No 74
>3knb_A Titin; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=66.65 E-value=36 Score=25.07 Aligned_cols=87 Identities=17% Similarity=0.231 Sum_probs=46.8
Q ss_pred CCeeecCcEEEEEECCCCCCcEEEEEEeE-eCCCCeeEEEEec-----CCCCCEEEcCcccE--EEcccCCcccCcEEEE
Q psy4697 42 ELQFSKNEYSVSALENLPVNYVLLTVTTN-KPRDLRVKYWLSN-----DYGERFSISRQGDI--SLMQCLDYETEDSYRF 113 (383)
Q Consensus 42 ~P~F~~~~y~~~V~En~~~gt~v~~v~A~-D~D~~~v~Ysi~~-----~~~~~F~Id~tG~I--~~~~~LD~E~~~~y~~ 113 (383)
||.|....-...+.|... ..+...+. +|. ..++....+ .....|.+...+.. ...+....+....|..
T Consensus 5 PP~i~~~p~~~~v~~G~~---~~l~C~~~g~P~-p~v~W~k~g~~i~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C 80 (100)
T 3knb_A 5 PPKIEALPSDISIDEGKV---LTVACAFTGEPT-PEVTWSCGGRKIHSQEQGRFHIENTDDLTTLIIMDVQKQDGGLYTL 80 (100)
T ss_dssp EEEECCCCSEEEEETTSE---EEEEEEEEEESC-CEEEEEETTEECCTTGGGTEEEEECSSEEEEEESSCCGGGCEEEEE
T ss_pred CCEEEeCCCcEEEeCCCe---EEEEEEEEEecC-CEEEEEECceEeeeeccceeeeecccceEEEEEcCCCccCCEEEEE
Confidence 688887777888888643 33333333 232 345544322 22334666543322 1234556676777776
Q ss_pred EEEEecCCceeEEEEEEEEee
Q psy4697 114 TVYATDTLMTTSATVNISVVN 134 (383)
Q Consensus 114 ~V~A~D~~~~s~~tV~I~V~D 134 (383)
.+ .+..-...+++.|.|..
T Consensus 81 ~a--~N~~G~~~~~~~l~V~~ 99 (100)
T 3knb_A 81 SL--GNEFGSDSATVNIHIRS 99 (100)
T ss_dssp EE--EETTEEEEEEEEEEEEC
T ss_pred EE--EECCCEEEEEEEEEEEE
Confidence 64 44433455666666654
No 75
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=65.10 E-value=3.5 Score=26.74 Aligned_cols=17 Identities=24% Similarity=0.260 Sum_probs=10.3
Q ss_pred HHHHHHHhhheeecCCC
Q psy4697 268 GFVIILLILYIHKNKHT 284 (383)
Q Consensus 268 ~l~~~~l~~~~~r~~~~ 284 (383)
++++.++.-+++..+||
T Consensus 28 ~l~~~~~~RRR~~~~kK 44 (44)
T 2jwa_A 28 GVVFGILIKRRQQKIRK 44 (44)
T ss_dssp HHHHHHHHHHHCSCCCC
T ss_pred HHHHHhheehhhhhccC
Confidence 34455666777766654
No 76
>3knb_B Obscurin-like protein 1; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 2wp3_O* 2wwm_C 2wwk_O
Probab=64.52 E-value=42 Score=25.11 Aligned_cols=86 Identities=14% Similarity=0.126 Sum_probs=47.0
Q ss_pred CCeeecCcEEEEEECCCCCCcEEEEEEeE-eCCCCeeEEEEec---CCCCCEEEcCcc---cEEEcccCCcccCcEEEEE
Q psy4697 42 ELQFSKNEYSVSALENLPVNYVLLTVTTN-KPRDLRVKYWLSN---DYGERFSISRQG---DISLMQCLDYETEDSYRFT 114 (383)
Q Consensus 42 ~P~F~~~~y~~~V~En~~~gt~v~~v~A~-D~D~~~v~Ysi~~---~~~~~F~Id~tG---~I~~~~~LD~E~~~~y~~~ 114 (383)
||.|.+..-.+.+.|+.. ..+...+. +|. ..++....+ .....+.+..+| .|. ......+....|...
T Consensus 13 pP~f~~~p~~~~v~~G~~---~~l~C~~~G~P~-p~v~W~k~g~~l~~~~~~~~~~~~~~~~L~-I~~v~~~D~G~Y~C~ 87 (107)
T 3knb_B 13 PPCFLRFPRPVRVVSGAE---AELKCVVLGEPP-PVVVWEKGGQQLAASERLSFPADGAEHGLL-LTAALPTDAGVYVCR 87 (107)
T ss_dssp EEEEEECCCCEEEETTSC---EEEEEEEEEESC-CEEEEEETTEECCCCSSEECCEETTEEEEE-ESSCCGGGCEEEEEE
T ss_pred CCEEEeCCCcEEEeCCCc---EEEEEEEEEecC-CEEEEEECcccccceeeEEEeecCceEEEE-EecCChhhCEEEEEE
Confidence 789988777788888753 33333333 232 345544322 233456665333 233 345566667777665
Q ss_pred EEEecCCceeEEEEEEEEee
Q psy4697 115 VYATDTLMTTSATVNISVVN 134 (383)
Q Consensus 115 V~A~D~~~~s~~tV~I~V~D 134 (383)
+ .+..-...+++.|.|.+
T Consensus 88 a--~N~~G~~~~~~~l~V~~ 105 (107)
T 3knb_B 88 A--RNAAGEAYAAAAVTVLE 105 (107)
T ss_dssp E--EETTEEEEEEEEEEEEC
T ss_pred E--EECCCEEEEEEEEEEEc
Confidence 4 44433445556666654
No 77
>2l6w_A Beta-type platelet-derived growth factor receptor; transmembrane helix, receptor tyrosine kinase, heptad repeat membrane protein; NMR {Homo sapiens}
Probab=67.35 E-value=1.5 Score=27.55 Aligned_cols=6 Identities=17% Similarity=0.556 Sum_probs=2.2
Q ss_pred HHHHHH
Q psy4697 262 VVLIVL 267 (383)
Q Consensus 262 ~i~~lL 267 (383)
++++++
T Consensus 13 avlal~ 18 (39)
T 2l6w_A 13 AILALV 18 (39)
Confidence 333333
No 78
>3pe9_A Fibronectin(III)-like module; CBHA, beta-sandwich, cellulosome, unknown function; 1.69A {Clostridium thermocellum}
Probab=61.54 E-value=50 Score=25.00 Aligned_cols=69 Identities=13% Similarity=0.116 Sum_probs=38.6
Q ss_pred ceEEEEEeeeCCCCC-eEEEEEeCCCCCCEEEcC-CCcEEEeccCCCCcceEEEEEEEeeCCCCCceeEEEEEEEEeC
Q psy4697 163 SVIGKVEAADGDKGD-RVTLSLRGPYEKMFSIND-SGHISIVDLSALNTSTIQLVVVATDTGNPPRQASVPAIMHFPE 238 (383)
Q Consensus 163 ~~v~~v~A~D~D~g~-~i~ysi~~~~~~~F~i~~-tG~i~l~~~~~~~~~~y~L~V~a~D~g~p~~sst~tv~I~v~~ 238 (383)
.+.....|.|.|.+- ++.|.+.+. ...-+. ...-+.+.. . .+.|.|.++|+|..+-.. .+..|.|+|.+
T Consensus 18 ~v~i~a~A~D~dg~V~kVef~vdg~---~vg~dt~apy~~~w~~--~-~G~htl~a~AtD~~G~~~-tS~~v~vtV~~ 88 (98)
T 3pe9_A 18 FLKITATASDSDGKISRVDFLVDGE---VIGSDREAPYEYEWKA--V-EGNHEISVIAYDDDDAAS-TPDSVKIFVKQ 88 (98)
T ss_dssp EEEEEEEECCSSSCEEEEEEEETTE---EEEEECSSSEEEEEEC--C-SEEEEEEEEEEETTCCBC-CCEEEEEEEEC
T ss_pred EEEEEEEEEeCCCCEEEEEEEECCE---EecccccCCEEEEEEc--C-CccEEEEEEEEECCCCEE-eeeEEEEEECc
Confidence 345677888887433 788887532 111121 111111222 1 589999999999865432 24456666643
No 79
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=60.98 E-value=7.3 Score=24.40 Aligned_cols=9 Identities=22% Similarity=0.231 Sum_probs=3.5
Q ss_pred hHHHHHHHH
Q psy4697 260 LGVVLIVLG 268 (383)
Q Consensus 260 l~~i~~lL~ 268 (383)
+++++.+++
T Consensus 18 vG~v~gv~l 26 (38)
T 2k1k_A 18 FGLLLGAAL 26 (38)
T ss_dssp HHHHHHHHH
T ss_pred hHHHHHHHH
Confidence 333433333
No 80
>2yrl_A KIAA1837 protein; PKD domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=60.61 E-value=15 Score=28.02 Aligned_cols=32 Identities=22% Similarity=0.326 Sum_probs=27.1
Q ss_pred ccCcEEEEEEEEecC-CceeEEEEEEEEeecCC
Q psy4697 106 ETEDSYRFTVYATDT-LMTTSATVNISVVNVND 137 (383)
Q Consensus 106 E~~~~y~~~V~A~D~-~~~s~~tV~I~V~DvND 137 (383)
.....|.|++.++|+ |.+++.++.|.|...+.
T Consensus 66 ~~~G~y~f~LTVtD~~G~s~s~~v~VtV~~~~~ 98 (102)
T 2yrl_A 66 LQVGTYVFTLTVKDERNLQSQSSVNVIVKEESG 98 (102)
T ss_dssp CCSSEEEEEEEEEBTTCCEEEEEEEEEEECCSS
T ss_pred CCCeEEEEEEEEEeCCCCEEEeEEEEEEcCCCC
Confidence 346799999999996 58899999999988765
No 81
>2l8s_A Integrin alpha-1; transmembrane region, detergent micelle, CE adhesion; NMR {Homo sapiens}
Probab=55.50 E-value=7.1 Score=26.45 Aligned_cols=25 Identities=12% Similarity=0.158 Sum_probs=18.2
Q ss_pred CCceeeehhhHHHHHHHHHHHHHHh
Q psy4697 251 GTSSTVLIILGVVLIVLGFVIILLI 275 (383)
Q Consensus 251 ~~~~~li~~l~~i~~lL~l~~~~l~ 275 (383)
.+..++++++++++++.+++.++.=
T Consensus 8 p~WiIi~svl~GLLLL~Lii~~LwK 32 (54)
T 2l8s_A 8 PLWVILLSAFAGLLLLMLLILALWK 32 (54)
T ss_dssp CTHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4567888899999887766665543
No 82
>2jp3_A FXYD domain-containing ION transport regulator 4; protein, transcription; NMR {Rattus norvegicus}
Probab=52.01 E-value=9.2 Score=26.98 Aligned_cols=12 Identities=25% Similarity=0.623 Sum_probs=4.9
Q ss_pred hHHHHHHHHHHH
Q psy4697 260 LGVVLIVLGFVI 271 (383)
Q Consensus 260 l~~i~~lL~l~~ 271 (383)
+|++++++.+++
T Consensus 24 fA~vLfi~GI~i 35 (67)
T 2jp3_A 24 FGGLLCIAGIAL 35 (67)
T ss_dssp HHHHHHHHHHHH
T ss_pred hHHHHHHHHHHH
Confidence 344444444433
No 83
>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus}
Probab=50.84 E-value=1.5e+02 Score=27.04 Aligned_cols=187 Identities=15% Similarity=0.130 Sum_probs=84.8
Q ss_pred EEEEEEEECCCCCceEEEEEEEEEeeCCCCCCeeecCcEEEEEECCCCCCcEEEEEEeEeCCCCeeEEEEec----CCCC
Q psy4697 12 TLVVRAIQYDNQDRYALATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSN----DYGE 87 (383)
Q Consensus 12 ~l~V~a~D~g~~~~~s~~~v~V~V~DvNdn~P~F~~~~y~~~V~En~~~gt~v~~v~A~D~D~~~v~Ysi~~----~~~~ 87 (383)
...+.|.+......+....+.|.....-..+|.|....-...+.|.... +.-+.+.+..+ ..+++...+ ....
T Consensus 191 ~Y~C~~~n~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~~~~~g~~~-~l~C~~~~~p~--~~~~W~~~~~~~~~~~~ 267 (403)
T 3laf_A 191 VYRCSARNPASTRTGNEAEVRILSDPGLHRQLYFLQRPSNVIAIEGKDA-VLECCVSGYPP--PSFTWLRGEEVIQLRSK 267 (403)
T ss_dssp EEEEEEECSSCCCBCCCEEEEEECCCCCCEEEEEEECCCCEEEETTSCE-EECCEEEEESC--CEEEEEETTEECCCSSS
T ss_pred EEEEEEEcCCCceeccceeEEEecCCCcccCceEecCCCceEecCCCcE-EEEEEcCCCCC--CeEEEEECCeeccCCCc
Confidence 3455666644333334444444433222223344444444555554321 22223333211 234433222 1223
Q ss_pred CEEEcCcccEEEcccCCcccCcEEEEEEEEecCCceeEEEEEEEEeecCCCCCcccCCceeEEEeccCCCCCCCCceE-E
Q psy4697 88 RFSISRQGDISLMQCLDYETEDSYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVI-G 166 (383)
Q Consensus 88 ~F~Id~tG~I~~~~~LD~E~~~~y~~~V~A~D~~~~s~~tV~I~V~DvNDn~P~f~~~~~~~~v~~~~~e~~~~g~~v-~ 166 (383)
.+.+...+.|.+ ..+..+....|...+.-. .......+.+.|.. +|.|........+. .|..+ .
T Consensus 268 ~~~~~~~~~L~i-~~~~~~d~G~Y~C~a~n~--~g~~~~~~~l~V~~----~p~~~~~~~~~~~~--------~g~~v~l 332 (403)
T 3laf_A 268 KYSLLGGSNLLI-SNVTDDDSGTYTCVVTYK--NENISASAELTVLV----PPWFLNHPSNLYAY--------ESMDIEF 332 (403)
T ss_dssp SEEEETTTEEEE-CSCCGGGCEEEEEEEEET--TEEEEEEEEEEEEE----EEEEEECCCCEECC--------TTCCEEE
T ss_pred eEEECCccEEEE-eCCCHHHCEEEEEEEEcC--CCceEEEEEEEEEC----CCcEeecCcceEEe--------cCCeEEE
Confidence 344444444443 445667777787776433 32334444555543 56665443333333 23222 2
Q ss_pred EEEeeeCCCCCeEEEEEeC---CCCCCEEEcCCCcEEEeccCCCCcceEEEEEE
Q psy4697 167 KVEAADGDKGDRVTLSLRG---PYEKMFSINDSGHISIVDLSALNTSTIQLVVV 217 (383)
Q Consensus 167 ~v~A~D~D~g~~i~ysi~~---~~~~~F~i~~tG~i~l~~~~~~~~~~y~L~V~ 217 (383)
...+. .+....+.+...+ .....+.+...+.+.+......+.+.|...+.
T Consensus 333 ~C~~~-g~p~p~v~W~~~g~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~ 385 (403)
T 3laf_A 333 ECAVS-GKPVPTVNWMKNGDVVIPSDYFQIVGGSNLRILGVVKSDEGFYQCVAE 385 (403)
T ss_dssp CCEEE-EESCCEEEEEETTEECCCSSSEEEETTTEEEESSCCGGGCEEEEEEEE
T ss_pred EEEEe-eccCCEEEEEECCEECCCCCcEEEecCccEEEeccccccCEEEEEEEE
Confidence 22222 1112244444332 23345666666777777666677888877553
No 84
>2jo1_A Phospholemman; FXYD1, Na,K-ATPase, micelle, hydrolase regulator; NMR {Homo sapiens}
Probab=49.88 E-value=14 Score=26.32 Aligned_cols=26 Identities=23% Similarity=0.365 Sum_probs=11.8
Q ss_pred hHHHHHHHHHHHHHHhhheeecCCCC
Q psy4697 260 LGVVLIVLGFVIILLILYIHKNKHTK 285 (383)
Q Consensus 260 l~~i~~lL~l~~~~l~~~~~r~~~~~ 285 (383)
+|++++++.+++++--.++|+.++|.
T Consensus 23 fA~vLfi~GI~iilS~KckCk~~qk~ 48 (72)
T 2jo1_A 23 IAGILFILGILIVLSRRCRCKFNQQQ 48 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCTTT
T ss_pred HHHHHHHHHHHHHHcCccccCCCCCC
Confidence 34444444444443334455555543
No 85
>2yrl_A KIAA1837 protein; PKD domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=48.77 E-value=33 Score=26.06 Aligned_cols=31 Identities=6% Similarity=-0.046 Sum_probs=25.1
Q ss_pred CCeEEEEEEEEECCCCCceEEEEEEEEEeeCCC
Q psy4697 8 LQPITLVVRAIQYDNQDRYALATLIVSKAGTSL 40 (383)
Q Consensus 8 ~~~y~l~V~a~D~g~~~~~s~~~v~V~V~DvNd 40 (383)
...|.+++.++|.. +.+++.++.|.|.+.++
T Consensus 68 ~G~y~f~LTVtD~~--G~s~s~~v~VtV~~~~~ 98 (102)
T 2yrl_A 68 VGTYVFTLTVKDER--NLQSQSSVNVIVKEESG 98 (102)
T ss_dssp SSEEEEEEEEEBTT--CCEEEEEEEEEEECCSS
T ss_pred CeEEEEEEEEEeCC--CCEEEeEEEEEEcCCCC
Confidence 45799999999954 67888888998887655
No 86
>3ead_A Na/Ca exchange protein; CBD1, calcium regulation, membrane, transmembrane, membrane; 2.25A {Drosophila melanogaster} SCOP: b.1.27.0
Probab=48.56 E-value=1e+02 Score=24.59 Aligned_cols=42 Identities=12% Similarity=0.044 Sum_probs=22.3
Q ss_pred CCCCeeecCcEEEEEECCCCCCcEEEEEEeEe-CCC-CeeEEEEec
Q psy4697 40 LRELQFSKNEYSVSALENLPVNYVLLTVTTNK-PRD-LRVKYWLSN 83 (383)
Q Consensus 40 dn~P~F~~~~y~~~V~En~~~gt~v~~v~A~D-~D~-~~v~Ysi~~ 83 (383)
|+++.+....-...|.|+. |..-.+|.-.- .+. ..|.|...+
T Consensus 2 d~~~~i~F~~~~y~V~E~~--g~~~v~V~R~g~~~~~v~V~y~t~~ 45 (137)
T 3ead_A 2 DDPIRMYFEPGHYTVMENC--GEFEVRVVRRGDISTYASVEYETQD 45 (137)
T ss_dssp ---CEEEESSCEEEEEGGG--CEEEEEEEEESCCSSCEEEEEEEEC
T ss_pred CCCEEEEEcCCEEEEECCC--eEEEEEEEEECCCCceEEEEEEeEC
Confidence 3455555455556778975 56555554432 222 567787654
No 87
>3rb5_A Na/Ca exchange protein; CBD12, calcium binding and regulation, metal binding protein; 2.35A {Drosophila melanogaster} PDB: 3rb7_A 3e9u_A
Probab=48.30 E-value=95 Score=28.48 Aligned_cols=48 Identities=17% Similarity=0.135 Sum_probs=28.2
Q ss_pred EEEEEeeCCCCCCeeecCcEEEEEECCCCCCcEEEEEEeEeCCC--CeeEEEE
Q psy4697 31 LIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPRD--LRVKYWL 81 (383)
Q Consensus 31 v~V~V~DvNdn~P~F~~~~y~~~V~En~~~gt~v~~v~A~D~D~--~~v~Ysi 81 (383)
.+|.|.| ||++|.|....-...|.|+. |.....|.-+.+-. -.+.|+.
T Consensus 112 atvtI~d-dD~~g~~~f~~~~~~V~E~~--g~~~~~V~Rs~~~~g~vtV~~~T 161 (298)
T 3rb5_A 112 ATVMILD-DDHAGIFAFTDSVFEITESV--GRFELKVMRYSGARGTVIVPYWT 161 (298)
T ss_dssp EEEEEEC-CCCCCEEECSCSEEEECTTC--CCEEEEEEEESCCCSCEEEEEEE
T ss_pred EEEEEec-cccccccccccccEEeecCC--ceEEEEEEEEecCCCCEEEEEEe
Confidence 3455555 57788877666667888885 56555555443322 2344543
No 88
>2kpn_A Bacillolysin; solution structure, BIG_3 domain, PF07523, PSI BIG-open NESG, cell WALL, hydrolase, peptidoglycan-anchor; NMR {Bacillus cereus atcc 14579}
Probab=47.92 E-value=50 Score=25.32 Aligned_cols=44 Identities=18% Similarity=0.162 Sum_probs=33.7
Q ss_pred EEEcccCCcccCcEEEEEEEEecC-CceeEEEEEEEEeecCCCCC
Q psy4697 97 ISLMQCLDYETEDSYRFTVYATDT-LMTTSATVNISVVNVNDWDP 140 (383)
Q Consensus 97 I~~~~~LD~E~~~~y~~~V~A~D~-~~~s~~tV~I~V~DvNDn~P 140 (383)
|......|......|.++..++|. |..++++.+|.|.+..+..|
T Consensus 47 I~V~g~Vdt~k~G~Y~VtY~VtDs~Gn~~t~trtVtV~~~~e~~~ 91 (103)
T 2kpn_A 47 IKVDGEVDTTKAGTYVLTYTVTDSKGHEVTAKQTVTVKVREEVKN 91 (103)
T ss_dssp CEEESCCCSSSCEEEEEEEEEECTTSCEEEEEEEEEEECSSCCCC
T ss_pred EEEeCcccCCCceEEEEEEEEEcCCCCEEEEEEEEEEeCCCcccC
Confidence 334456777788899999999995 67888888999988665444
No 89
>2qsq_A Carcinoembryonic antigen-related cell adhesion MO; glycoprotein, GPI-anchor, immunoglobulin DOMA lipoprotein, membrane; 1.95A {Homo sapiens} PDB: 2qst_A 2ver_N* 2gk2_A
Probab=45.44 E-value=54 Score=24.98 Aligned_cols=47 Identities=15% Similarity=0.088 Sum_probs=34.2
Q ss_pred CCCCEEEcCCCcEEEeccCCCCcceEEEEEEEeeCCCCCceeEEEEEEE
Q psy4697 187 YEKMFSINDSGHISIVDLSALNTSTIQLVVVATDTGNPPRQASVPAIMH 235 (383)
Q Consensus 187 ~~~~F~i~~tG~i~l~~~~~~~~~~y~L~V~a~D~g~p~~sst~tv~I~ 235 (383)
..+...+-++|.|.+......|.+.|.+.+.-.+.+ ...+++.|.|.
T Consensus 62 ~~gR~~~~~ngSL~I~nvt~~D~G~Ytc~v~~~~~~--~~~~~~~L~V~ 108 (111)
T 2qsq_A 62 YSGREIIYPNASLLIQNIIQNDAGFYTLHVIKSDLV--NEEATGQFRVY 108 (111)
T ss_dssp CCSCEEECTTSCEEECSCCGGGCEEEEEEEEETTSC--CEEEEEEEEEE
T ss_pred cCCcEEEecCCcEEEccCcccCCeEEEEEEEeCCCc--EEEEEEEEEEe
Confidence 456778888999999888888999999988755432 34556666553
No 90
>2zxe_G FXYD10, phospholemman-like protein; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_G*
Probab=44.35 E-value=11 Score=27.00 Aligned_cols=7 Identities=57% Similarity=0.914 Sum_probs=2.6
Q ss_pred HHHHHHH
Q psy4697 262 VVLIVLG 268 (383)
Q Consensus 262 ~i~~lL~ 268 (383)
++++++.
T Consensus 28 ~vLfi~G 34 (74)
T 2zxe_G 28 AVLCVIG 34 (74)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 3333333
No 91
>2knc_A Integrin alpha-IIB; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}
Probab=39.94 E-value=10 Score=25.75 Aligned_cols=25 Identities=16% Similarity=0.171 Sum_probs=17.8
Q ss_pred CCceeeehhhHHHHHHHHHHHHHHh
Q psy4697 251 GTSSTVLIILGVVLIVLGFVIILLI 275 (383)
Q Consensus 251 ~~~~~li~~l~~i~~lL~l~~~~l~ 275 (383)
.+..++++++++++++.++++++.=
T Consensus 11 p~wiIi~svl~GLllL~li~~~LwK 35 (54)
T 2knc_A 11 PIWWVLVGVLGGLLLLTILVLAMWK 35 (54)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4567888888888887666655543
No 92
>2v5t_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, membrane, glycoprote adhesion, transmembrane; HET: NAG; 2.00A {Homo sapiens}
Probab=39.27 E-value=1.4e+02 Score=23.53 Aligned_cols=161 Identities=10% Similarity=0.099 Sum_probs=78.5
Q ss_pred CCeeecCcEEEEEECCCCCCcEEEEEEeEeCCCCeeEEEEec-----CCCCCEEEcCcccEEEcccCCcccCcEEEEEEE
Q psy4697 42 ELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSN-----DYGERFSISRQGDISLMQCLDYETEDSYRFTVY 116 (383)
Q Consensus 42 ~P~F~~~~y~~~V~En~~~gt~v~~v~A~D~D~~~v~Ysi~~-----~~~~~F~Id~tG~I~~~~~LD~E~~~~y~~~V~ 116 (383)
+|.|........+.|+.. ..+.-.+.......+.+...+ .....+.+..+|.|.+ ..+..+....|...+.
T Consensus 2 ~~~~~~~~~~~~v~~G~~---v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~L~i-~~~~~~d~G~Y~C~~~ 77 (189)
T 2v5t_A 2 MLTFREVVSPQEFKQGED---AEVVCRVSSSPAPAVSWLYHNEEVTTISDNRFAMLANNNLQI-LNINKSDEGIYRCEGR 77 (189)
T ss_dssp CCEEEECCSSEEEETTSC---EEECCEEECSSCCEEEEEC-----CBCCCTTEEECTTSCEEE-TTCCGGGCEEEEEEEE
T ss_pred CceeeccCCCEEEeCCCc---EEEEEEEcCCCCCEEEEEECCccceeccCCeEEEecCCCEEE-eeCCHhHCcEEEEEEE
Confidence 567766666667777643 222223322112333332221 2234566666666654 3456677788988876
Q ss_pred EecCCceeEEEEEEEEeecCCCCCcccCCceeEEEeccCCCCCCCCceE-EEEEeeeCCCCCeEEEEEeC---CCCCCEE
Q psy4697 117 ATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVI-GKVEAADGDKGDRVTLSLRG---PYEKMFS 192 (383)
Q Consensus 117 A~D~~~~s~~tV~I~V~DvNDn~P~f~~~~~~~~v~~~~~e~~~~g~~v-~~v~A~D~D~g~~i~ysi~~---~~~~~F~ 192 (383)
...++......+.+.+.. +|.+.......... ...|..+ ....+.. .....+.+...+ .....+.
T Consensus 78 ~~~~~~~~~~~~~l~v~~----~p~~~~~~~~~~~~------~~~g~~v~l~C~~~g-~p~~~v~W~~~g~~~~~~~~~~ 146 (189)
T 2v5t_A 78 VEARGEIDFRDIIVIVNV----PPAISMPQKSFNAT------AERGEEMTFSCRASG-SPEPAISWFRNGKLIEENEKYI 146 (189)
T ss_dssp ETTTTEEEEEEEEEEEEE----EEEEECSCCEEEEE------TTSCCCEEEECEEEE-ESCCEEEEEETTEECCCSSSEE
T ss_pred EcCCCceEEEEEEEEecC----CCCccccccccccc------ccCCCcEEEEEEEcc-CCCCeEEEEECCEECcCCCcEE
Confidence 655554444455555543 45444332221111 1223322 2222321 111244443322 2334566
Q ss_pred EcC-CCcEEEeccCCCCcceEEEEEE
Q psy4697 193 IND-SGHISIVDLSALNTSTIQLVVV 217 (383)
Q Consensus 193 i~~-tG~i~l~~~~~~~~~~y~L~V~ 217 (383)
+.. .+.+.+......+.+.|...+.
T Consensus 147 ~~~~~~~L~i~~~~~~d~G~Y~C~a~ 172 (189)
T 2v5t_A 147 LKGSNTELTVRNIINSDGGPYVCRAT 172 (189)
T ss_dssp EETTTTEEEECSCCGGGCEEEEEEEE
T ss_pred EecCCCEEEEcCCChhhCeeEEEEEE
Confidence 665 6677777666677888877553
No 93
>3lb6_C IL-13, interleukin-13 receptor subunit alpha-2; cytokine, decoy, decoy receptor, glycoprotein; HET: MLY NAG; 3.05A {Homo sapiens} PDB: 3lb6_D*
Probab=37.68 E-value=43 Score=31.58 Aligned_cols=13 Identities=8% Similarity=0.169 Sum_probs=8.9
Q ss_pred CcEEEEEEEEecC
Q psy4697 108 EDSYRFTVYATDT 120 (383)
Q Consensus 108 ~~~y~~~V~A~D~ 120 (383)
...|.|.|.|...
T Consensus 207 ~~~Y~i~V~a~n~ 219 (380)
T 3lb6_C 207 YKDFYICVNGSSE 219 (380)
T ss_dssp SSCEEEEEEEC--
T ss_pred eeEEEEEEEEEcC
Confidence 4578999998863
No 94
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=37.58 E-value=2.2e+02 Score=29.29 Aligned_cols=68 Identities=18% Similarity=0.202 Sum_probs=41.7
Q ss_pred EEEEeeeCC--CCC--eEEEEEeCCCCCCEEEcCCCcEEEeccCCCCcceEEEEEEEeeCCCCCceeEEEEEEEE
Q psy4697 166 GKVEAADGD--KGD--RVTLSLRGPYEKMFSINDSGHISIVDLSALNTSTIQLVVVATDTGNPPRQASVPAIMHF 236 (383)
Q Consensus 166 ~~v~A~D~D--~g~--~i~ysi~~~~~~~F~i~~tG~i~l~~~~~~~~~~y~L~V~a~D~g~p~~sst~tv~I~v 236 (383)
.++...-.+ ..+ .+.|.|.|-...+-.......+... .+..+.|.|.|.|.+....-....+++.|.|
T Consensus 709 ~~i~fs~l~y~~~~~~~y~YrL~G~d~~W~~~~~~~~~~yt---nL~pG~Y~f~V~a~n~~g~w~~~~~~l~i~I 780 (795)
T 4a2l_A 709 FSIEFVVSNYISGQHNTFAYKLEGYDKEWYYLTDSRTVSYS---NLPQGTYQFLVKAANSDGKWNPIPTALEIIV 780 (795)
T ss_dssp EEEEEEECCTTTTTCCEEEEEEETTCSSCEEESSCCEEEEE---CCCSEEEEEEEEEECTTSCBCSSCEEEEEEE
T ss_pred EEEEEEEccCCCccccEEEEEEeCCCCCccCCCCcCeEEec---ccCCCeEEEEEEEECCCCccCCCceEEEEEE
Confidence 344444444 333 5777787655555445434444333 3678999999999997654333456688888
No 95
>3gin_A Sodium/calcium exchanger 1; CBD1, CBD2, NCX, calcium binding domain 1, antiport, calcium transport, calmodulin-binding, cell membrane; 2.40A {Canis lupus familiaris} PDB: 2dpk_A* 2fws_A
Probab=37.55 E-value=1.6e+02 Score=24.21 Aligned_cols=53 Identities=21% Similarity=0.127 Sum_probs=25.9
Q ss_pred EEEEEEEEeeCCCCCCeeecCcEEEEEECCCCCCcEEEEEEeEeCC--C-CeeEEEEec
Q psy4697 28 LATLIVSKAGTSLRELQFSKNEYSVSALENLPVNYVLLTVTTNKPR--D-LRVKYWLSN 83 (383)
Q Consensus 28 ~~~v~V~V~DvNdn~P~F~~~~y~~~V~En~~~gt~v~~v~A~D~D--~-~~v~Ysi~~ 83 (383)
.+.+.|.|.| ||..+.|....-...|.|+. |..-.+|.=...+ . ..|.|...+
T Consensus 9 ~~~~~~~i~d-dd~~g~i~F~~~~y~V~E~~--G~v~vtV~R~~G~~~~~v~V~y~T~d 64 (160)
T 3gin_A 9 SAALEVLFQG-PGPVSKIFFEQGTYQCLENC--GTVALTIIRRGGDLTNTVFVDFRTED 64 (160)
T ss_dssp -------------CEEEEEESCSEEEEETTS--SEEEEEEEEESSCTTSCEEEEEEEEE
T ss_pred cceEEEEEec-CCCccEEEEeCCEEEEEcCc--EEEEEEEEEccCCCCcEEEEEEEEEC
Confidence 3445677777 55577776666667888985 6665565444333 2 457787654
No 96
>2y72_A Collagenase, collagenase G; polycystic kidney disease domain, beta barrel, collagen RECO domain, hydrolase; 1.18A {Clostridium histolyticum} PDB: 3jqu_A 3js7_A
Probab=36.03 E-value=55 Score=23.67 Aligned_cols=30 Identities=23% Similarity=0.393 Sum_probs=23.9
Q ss_pred CcccCcEEEEEEEEecC-CceeEEEEEEEEe
Q psy4697 104 DYETEDSYRFTVYATDT-LMTTSATVNISVV 133 (383)
Q Consensus 104 D~E~~~~y~~~V~A~D~-~~~s~~tV~I~V~ 133 (383)
-|.....|.+++.++|. |..++.++.|.|.
T Consensus 54 ty~~~G~Y~v~LtVtd~~G~~~t~~~~V~V~ 84 (85)
T 2y72_A 54 AYKKAGTYNVTLKVTDDKGATATESFTIEIK 84 (85)
T ss_dssp ECSSCEEEEEEEEEEETTSCEEEEEEEEEEE
T ss_pred EcCCCeEEEEEEEEEECCCCEEEEEEEEEEc
Confidence 45667899999999995 5777788888775
No 97
>3ead_A Na/Ca exchange protein; CBD1, calcium regulation, membrane, transmembrane, membrane; 2.25A {Drosophila melanogaster} SCOP: b.1.27.0
Probab=33.95 E-value=29 Score=27.87 Aligned_cols=10 Identities=0% Similarity=-0.087 Sum_probs=5.7
Q ss_pred EEEEEEEEee
Q psy4697 28 LATLIVSKAG 37 (383)
Q Consensus 28 ~~~v~V~V~D 37 (383)
.+++.|.|.|
T Consensus 69 ~k~i~V~I~d 78 (137)
T 3ead_A 69 EQRFRIEVID 78 (137)
T ss_dssp EEEEEEEBCC
T ss_pred EEEEEEEEec
Confidence 4556666554
No 98
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=27.90 E-value=2.3e+02 Score=28.86 Aligned_cols=57 Identities=14% Similarity=0.188 Sum_probs=36.2
Q ss_pred eEEEEEeCCCCCCEEEcC-CCcEEEeccCCCCcceEEEEEEEeeCCCCCceeEEEEEEEEe
Q psy4697 178 RVTLSLRGPYEKMFSIND-SGHISIVDLSALNTSTIQLVVVATDTGNPPRQASVPAIMHFP 237 (383)
Q Consensus 178 ~i~ysi~~~~~~~F~i~~-tG~i~l~~~~~~~~~~y~L~V~a~D~g~p~~sst~tv~I~v~ 237 (383)
.+.|.|.|-...+-.+.. ...+. ...+..+.|.|.|.|.+....-....++|.|.|.
T Consensus 690 ~y~Y~L~G~d~~W~~~~~~~~~~~---ytnL~pG~Y~f~V~a~~~~g~w~~~~~~l~I~I~ 747 (758)
T 3ott_A 690 KFVYRLEGMDKEWNFLKSNINRIT---YSNLSYGNYQLIISKLERDGQPSNRPHILNIRIL 747 (758)
T ss_dssp CEEEEEETTCSSCEECCTTCCEEE---ECSCCSEEEEEEEEEBCTTSCBCSSCEEEEEEEC
T ss_pred eEEEEecCCCCCccCCCCCcceEE---ecCCCCccEEEEEEEeCCCCCccCccEEEEEEEC
Confidence 477777764444444432 33343 2346789999999999976543344567888883
No 99
>2y72_A Collagenase, collagenase G; polycystic kidney disease domain, beta barrel, collagen RECO domain, hydrolase; 1.18A {Clostridium histolyticum} PDB: 3jqu_A 3js7_A
Probab=27.57 E-value=87 Score=22.56 Aligned_cols=52 Identities=19% Similarity=0.201 Sum_probs=31.2
Q ss_pred CCeEEEEEe-CCCCCCEEEcCCCcEEEeccCCCCcceEEEEEEEeeCCCCCceeEEEEEEEE
Q psy4697 176 GDRVTLSLR-GPYEKMFSINDSGHISIVDLSALNTSTIQLVVVATDTGNPPRQASVPAIMHF 236 (383)
Q Consensus 176 g~~i~ysi~-~~~~~~F~i~~tG~i~l~~~~~~~~~~y~L~V~a~D~g~p~~sst~tv~I~v 236 (383)
|..+.|.+. |+.. .. ++.-.. ..+...+.|.+.+.|+|... .+++.++.|.|
T Consensus 31 g~~~~y~W~fgdG~--~s---~~~~~~--hty~~~G~Y~v~LtVtd~~G--~~~t~~~~V~V 83 (85)
T 2y72_A 31 GKIVSYDWDFGDGA--TS---RGKNSV--HAYKKAGTYNVTLKVTDDKG--ATATESFTIEI 83 (85)
T ss_dssp SCEEEEEEECSSSC--EE---ESSEEE--EECSSCEEEEEEEEEEETTS--CEEEEEEEEEE
T ss_pred CCEEEEEEEECCCC--cc---cccceE--EEcCCCeEEEEEEEEEECCC--CEEEEEEEEEE
Confidence 556788886 3322 11 121111 23456789999999999876 45556666665
No 100
>1afo_A Glycophorin A; integral membrane protein, transmembrane helix interactions, membrane protein folding; NMR {Homo sapiens} SCOP: j.35.1.1 PDB: 2kpf_A
Probab=26.40 E-value=33 Score=21.43 Aligned_cols=29 Identities=28% Similarity=0.445 Sum_probs=15.6
Q ss_pred eeeehhhHHHHHHHHHHHHHHhhheeecCC
Q psy4697 254 STVLIILGVVLIVLGFVIILLILYIHKNKH 283 (383)
Q Consensus 254 ~~li~~l~~i~~lL~l~~~~l~~~~~r~~~ 283 (383)
....++++.++++...+++ ++..++|-.|
T Consensus 11 ~i~lII~~vmaGiIG~Ill-I~y~I~rl~K 39 (40)
T 1afo_A 11 EITLIIFGVMAGVIGTILL-ISYGIRRLIK 39 (40)
T ss_dssp HHHHHHHHHHHHHHHHHHH-HHHHHHHHSC
T ss_pred hhHHHHHHHHHHHHHHHHH-HHHHHHHHhh
Confidence 4456667766666655433 3444455444
No 101
>2c4x_A Endoglucanase, ctcel9D-CEL44A; cellulase ctcel9D-CEL44A, PKD domain, CBM44, carbohydrate BI module, beta-sandwich proteins, cellulosome; 2.0A {Clostridium thermocellum} PDB: 2c26_A
Probab=24.75 E-value=3.3e+02 Score=24.30 Aligned_cols=60 Identities=18% Similarity=0.179 Sum_probs=35.8
Q ss_pred eeCCCCCeEEEEEe-CCCCCCEEEcCCCcEEEeccCCCCcceEEEEEEEeeCCCCCceeEEEEEEEEeC
Q psy4697 171 ADGDKGDRVTLSLR-GPYEKMFSINDSGHISIVDLSALNTSTIQLVVVATDTGNPPRQASVPAIMHFPE 238 (383)
Q Consensus 171 ~D~D~g~~i~ysi~-~~~~~~F~i~~tG~i~l~~~~~~~~~~y~L~V~a~D~g~p~~sst~tv~I~v~~ 238 (383)
.|+| |..+.|.+. |+.. ..-..+-.+ ...+...+.|.+.+.|+|..+ .+++.+..|.|..
T Consensus 35 tD~d-G~i~sy~WdFGDG~--tst~~nP~~---thtY~~~GtYtVtLTVtD~~G--~s~t~t~~ItV~~ 95 (260)
T 2c4x_A 35 IDED-GTIAYYVWDFGDGY--EGTSTTPTI---TYKYKNPGTYKVKLIVTDNQG--ASSSFTATIKVTS 95 (260)
T ss_dssp BCSS-SCEEEEEEECSSSC--EEEESSSEE---EECCSSCEEEEEEEEEEETTS--CEEEEEEEEEEBC
T ss_pred cCCC-CCEEEEEEEeCCCC--cccccCcee---EEEeCCCEEEEEEEEEEeCCC--CeEEEEEEEEECC
Confidence 3444 567888886 4322 111111111 123456789999999999876 4556777787744
No 102
>2ptt_B Natural killer cell receptor 2B4; CD244, CD48, NK cell receptor, X-RAY, immune system; 1.63A {Mus musculus} PDB: 2ptu_A 1z2k_A
Probab=23.28 E-value=1.5e+02 Score=23.06 Aligned_cols=45 Identities=9% Similarity=0.125 Sum_probs=31.4
Q ss_pred CCCEEEcC-CCcEEEeccCCCCcceEEEEEEEeeCCCCCceeEEEEEEEE
Q psy4697 188 EKMFSIND-SGHISIVDLSALNTSTIQLVVVATDTGNPPRQASVPAIMHF 236 (383)
Q Consensus 188 ~~~F~i~~-tG~i~l~~~~~~~~~~y~L~V~a~D~g~p~~sst~tv~I~v 236 (383)
++.|.++. +|.+.+.....++.+.|-|.| ..+.|. .-+..+.+.|
T Consensus 65 k~r~~fd~~n~AL~I~~vQ~eDSg~Y~LeV-t~~tG~---v~~~~fql~V 110 (112)
T 2ptt_B 65 SDIYGFDYGDFALSIKSAKLQDSGHYLLEI-TNTGGK---VCNKNFQLLI 110 (112)
T ss_dssp GGTEEECTTTCCEEESSCCGGGCEEEEEEE-ECTTCB---EEEEEEEEEE
T ss_pred CCEEEEecCCcEEEEEecCcccCceEEEEE-ecCCCc---EEEEEEEEEe
Confidence 34688886 999999888888999999988 333343 4444455444
No 103
>4dkd_C Macrophage colony-stimulating factor 1 receptor; dimeric four-helix bundle cytokine, receptor tyrosine kinase glycosylation; HET: NAG BMA; 3.00A {Homo sapiens}
Probab=22.84 E-value=2.9e+02 Score=23.51 Aligned_cols=173 Identities=11% Similarity=-0.008 Sum_probs=0.0
Q ss_pred CCeeecCcEEEEEECCCCCCcEEEEEEeEeCCCCeeEEEEecCCCCCEEEcCcccEEEcccCCcccCcEEEEEEEEecCC
Q psy4697 42 ELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSNDYGERFSISRQGDISLMQCLDYETEDSYRFTVYATDTL 121 (383)
Q Consensus 42 ~P~F~~~~y~~~V~En~~~gt~v~~v~A~D~D~~~v~Ysi~~~~~~~F~Id~tG~I~~~~~LD~E~~~~y~~~V~A~D~~ 121 (383)
+|.|....-...+.|+ ....+.-.+... ++..........+..+..+.......+..+....|...+.-..+.
T Consensus 4 ~P~i~~~~~~~~v~~G---~~v~L~C~~~~~----v~W~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~ 76 (292)
T 4dkd_C 4 IPVIEPSVPELVVKPG---ATVTLRCVGNGS----VEWDGPPSPHWTLYSDGSSSILSTNNATFQNTGTYRCTEPGDPLG 76 (292)
T ss_dssp CCEEESCCSSCEECTT---CCEEEEEECSSC----CCBCCCCCSSCEECCBTTEEEEEESSCCGGGCSCEEECCCC----
T ss_pred CceecCCCCeEEEcCC---CcEEEEEcCCCc----eEEccCCCCceEEeccCceEEEEEcccccccCEEEEEEEccCCCC
Q ss_pred ceeEEEEEEEEeecCCCCCcccCCceeEEEeccCCCCCCCCceEEEEEeeeCCCCCeEEEEEe----CCCCCCEEEcCCC
Q psy4697 122 MTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVIGKVEAADGDKGDRVTLSLR----GPYEKMFSINDSG 197 (383)
Q Consensus 122 ~~s~~tV~I~V~DvNDn~P~f~~~~~~~~v~~~~~e~~~~g~~v~~v~A~D~D~g~~i~ysi~----~~~~~~F~i~~tG 197 (383)
.+..+.|.|. +-++.+........+. +. ......-.+.++.....+.+... -.....+.+...+
T Consensus 77 ~~~~~~l~V~-----~~~~~~~~~~~~~~v~----~g---~~v~l~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~ 144 (292)
T 4dkd_C 77 GSAAIHLYVK-----DPARPWNVLAQEVVVF----ED---QDALLPCLLTDPVLEAGVSLVRVRGRPLMRHTNYSFSPWH 144 (292)
T ss_dssp CCEEECCEEC-----CSSCCEEESCSEEEEE----TT---SCEECCEEESSGGGGSSEEEEEGGGCCCCSSCCEECCSSS
T ss_pred cceEEEEEEc-----CccccccccCCeEEEc----CC---CcEEEeeeCCCCCcceeEEEEecCCCccccCCcccccCCc
Q ss_pred cEEEeccCCCCcceEEEEEEEeeCCCCCceeEEEEEEE
Q psy4697 198 HISIVDLSALNTSTIQLVVVATDTGNPPRQASVPAIMH 235 (383)
Q Consensus 198 ~i~l~~~~~~~~~~y~L~V~a~D~g~p~~sst~tv~I~ 235 (383)
.+.+......+.+.|...+. ..+....+..+.|.|.
T Consensus 145 ~L~i~~~~~~d~G~Y~C~a~--n~~~~~~s~~~~l~V~ 180 (292)
T 4dkd_C 145 GFTIHRAKFIQSQDYQCSAL--MGGRKVMSISIRLKVQ 180 (292)
T ss_dssp CCEETTCCGGGCSEEEEEEC--STTSCEECCCEEEEEE
T ss_pred eEEECCCCHHHCeEEEEEEE--eCCCceeEEEEEEEEe
No 104
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=22.51 E-value=1.8e+02 Score=29.83 Aligned_cols=56 Identities=13% Similarity=0.250 Sum_probs=33.9
Q ss_pred eEEEEEeCCCCCCEEEcCCCcEEEeccCCCCcceEEEEEEEeeCCCCCceeEEEEEEEE
Q psy4697 178 RVTLSLRGPYEKMFSINDSGHISIVDLSALNTSTIQLVVVATDTGNPPRQASVPAIMHF 236 (383)
Q Consensus 178 ~i~ysi~~~~~~~F~i~~tG~i~l~~~~~~~~~~y~L~V~a~D~g~p~~sst~tv~I~v 236 (383)
.+.|.|.|-...+-.......+. ...+..+.|.|.|.|++....-....+++.|.|
T Consensus 719 ~y~YrL~G~d~~W~~~~~~~~~~---ytnL~pG~Y~f~V~a~~~~g~w~~~~~~l~i~I 774 (781)
T 3v9f_A 719 EYAYMLKGLENSWYTINEQNSVT---FRNIPPGKYEFLVKARLHNQDWSEDTTSLRIHI 774 (781)
T ss_dssp EEEEEEETTEEEEEEESSCSEEE---ECSCCSEEEEEEEEEEETTSCCCSCCEEEEEEE
T ss_pred EEEEEecCCCCCccCcCCcceEE---EcCCCCceEEEEEEEECCCCccCCCceEEEEEE
Confidence 35566665333333333333433 244678999999999998654233455677777
No 105
>1cd1_A CD1, MCD1D.1; immunology, MHC, TCR, glycoprotein, signal, immunoglobulin fold, T-cell; 2.67A {Mus musculus} SCOP: b.1.1.2 d.19.1.1
Probab=21.76 E-value=19 Score=33.32 Aligned_cols=7 Identities=0% Similarity=0.154 Sum_probs=3.2
Q ss_pred eEEEEEe
Q psy4697 178 RVTLSLR 184 (383)
Q Consensus 178 ~i~ysi~ 184 (383)
.+.+...
T Consensus 202 ~L~C~a~ 208 (315)
T 1cd1_A 202 QLVCHVS 208 (315)
T ss_dssp EEEEEEE
T ss_pred EEEEEEe
Confidence 3445443
No 106
>2yd1_A Tyrosine-protein phosphatase LAR; hydrolase; 1.80A {Drosophila melanogaster} PDB: 3pxj_A
Probab=21.14 E-value=3.3e+02 Score=21.97 Aligned_cols=180 Identities=8% Similarity=0.064 Sum_probs=85.8
Q ss_pred CCCeeecCcEEEEEECCCCCCcEEEEEEeEeCCCCeeEEEEec----CCCCCEEEc--Ccc-cEEEcccCCc-ccCcEEE
Q psy4697 41 RELQFSKNEYSVSALENLPVNYVLLTVTTNKPRDLRVKYWLSN----DYGERFSIS--RQG-DISLMQCLDY-ETEDSYR 112 (383)
Q Consensus 41 n~P~F~~~~y~~~V~En~~~gt~v~~v~A~D~D~~~v~Ysi~~----~~~~~F~Id--~tG-~I~~~~~LD~-E~~~~y~ 112 (383)
.||.|....-...+.|+.. ..+.-.+.......+++...+ .....|.+. ..| .......+.. +....|.
T Consensus 5 ~pP~~~~~p~~~~v~~G~~---v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~ 81 (212)
T 2yd1_A 5 HPPEIIRKPQNQGVRVGGV---ASFYCAARGDPPPSIVWRKNGKKVSGTQSRYTVLEQPGGISILRIEPVRAGRDDAPYE 81 (212)
T ss_dssp CCCEEEECCCCEEEETTSC---EEEEEEEECSSCCEEEEEETTEECCTTSTTEEEEEETTTEEEEEESSCCTTTTCSEEE
T ss_pred CCCEEEcCCCceEEecCCE---EEEEEEEccCCCCeEEEEECCEECCCCcceeEEEEcCCCeEEEEEEecCCCCcCceEE
Confidence 4888988777778887643 333333332111344444322 133445553 244 2223355666 7778888
Q ss_pred EEEEEecCCceeEEEEEEEEeecCCCC---CcccCCceeEEEeccCCCCCCCCceE-EEEEeeeCCCCCeEEEEEeC---
Q psy4697 113 FTVYATDTLMTTSATVNISVVNVNDWD---PRFRYPQYELFLPHIPLADLTPGSVI-GKVEAADGDKGDRVTLSLRG--- 185 (383)
Q Consensus 113 ~~V~A~D~~~~s~~tV~I~V~DvNDn~---P~f~~~~~~~~v~~~~~e~~~~g~~v-~~v~A~D~D~g~~i~ysi~~--- 185 (383)
..+.-.. +......+.+.|......+ |.|........+. .|..+ ....+ +......+.+...+
T Consensus 82 C~~~n~~-g~~~~~~~~l~V~~~~~~~~~~p~~~~~~~~~~~~--------~g~~v~l~C~~-~g~p~p~i~W~~~~~~~ 151 (212)
T 2yd1_A 82 CVAENGV-GDAVSADATLTIYEGDKTPAGFPVITQGPGTRVIE--------VGHTVLMTCKA-IGNPTPNIYWIKNQTKV 151 (212)
T ss_dssp EEEECSS-SCEEEEEEEEEEECTTCSCTTCCEEEECCCCEEEE--------TTCCEEECCEE-ECSSCCEEEEEETTEEC
T ss_pred EEEEeCC-CCeEEeeEEEEEecccCCCCCCCeeEeCCCceEee--------cCCeEEEEEEe-ccCCCCeEEEEECCeEc
Confidence 8774322 3335566666676554333 5554433223333 23222 22222 11112234443322
Q ss_pred -CCCCCEEEcCCCcEEEeccCCCCcceEEEEEEEeeCCCCCceeEEEEEEEE
Q psy4697 186 -PYEKMFSINDSGHISIVDLSALNTSTIQLVVVATDTGNPPRQASVPAIMHF 236 (383)
Q Consensus 186 -~~~~~F~i~~tG~i~l~~~~~~~~~~y~L~V~a~D~g~p~~sst~tv~I~v 236 (383)
.....+.+. +|.+.+......+.+.|...+ ....+...+..+.|.|.-
T Consensus 152 ~~~~~~~~~~-~~~L~i~~v~~~d~G~Y~C~a--~N~~G~~~s~~~~l~V~~ 200 (212)
T 2yd1_A 152 DMSNPRYSLK-DGFLQIENSREEDQGKYECVA--ENSMGTEHSKATNLYVKV 200 (212)
T ss_dssp CTTSTTEEEE-TTEEEECSCCGGGCEEEEEEE--EETTEEEECCCEEEEEEC
T ss_pred ccCCCeEEcc-CCeEEEccCChhhCEEEEEEe--ecCCCceeEEEEEEEEEe
Confidence 123344433 467777666667778887655 443322222234555543
No 107
>2o26_X MAST/stem cell growth factor receptor; stem cell factor, receptor tyrosine kinase, class III, recep ligand complex, cytokine, 4-helix bundle; HET: NAG FUL MAN NDG; 2.50A {Mus musculus}
Probab=20.09 E-value=4.1e+02 Score=22.61 Aligned_cols=119 Identities=10% Similarity=0.048 Sum_probs=60.3
Q ss_pred CEEEcCcccEEEcccCCcccCc-EEEEEEEEecCCceeEEEEEEEEeecCCCCCcccCCceeEEEeccCCCCCCCCceE-
Q psy4697 88 RFSISRQGDISLMQCLDYETED-SYRFTVYATDTLMTTSATVNISVVNVNDWDPRFRYPQYELFLPHIPLADLTPGSVI- 165 (383)
Q Consensus 88 ~F~Id~tG~I~~~~~LD~E~~~-~y~~~V~A~D~~~~s~~tV~I~V~DvNDn~P~f~~~~~~~~v~~~~~e~~~~g~~v- 165 (383)
.+.++..+.|. ...+..+... .|...+.-. ++......+.+.|...-..+|.|....... ....|..+
T Consensus 138 ~~~~~~~~~L~-i~~v~~~d~G~~Y~C~a~n~-~~~~~s~~~~l~V~~~~~~~P~i~~~~~~~--------~v~~G~~v~ 207 (290)
T 2o26_X 138 TFVPNPKAGIT-IKNVKRAYHRLCVRCAAQRD-GTWLHSDKFTLKVREAIKAIPVVSVPETSH--------LLKKGDTFT 207 (290)
T ss_dssp EEEEETTTEEE-EESCCGGGTTCEEEEEEEET-TEEEECCCEEEEEECCCCSCCEEECSCSBC--------CCCTTCCEE
T ss_pred ceeeCCCCCEE-EecccHHHCCCEEEEEEEEC-CceEEeEEEEEEEEeCCCCCCccccCCCcc--------eEecCCcEE
Confidence 45555555553 3456677777 888877643 333334456777776555678775432221 22234333
Q ss_pred EEEEeeeCCCCCeEEEEEeCCCC-------CC--EE----EcCCCcEEEeccCCCCcceEEEEE
Q psy4697 166 GKVEAADGDKGDRVTLSLRGPYE-------KM--FS----INDSGHISIVDLSALNTSTIQLVV 216 (383)
Q Consensus 166 ~~v~A~D~D~g~~i~ysi~~~~~-------~~--F~----i~~tG~i~l~~~~~~~~~~y~L~V 216 (383)
..-.+........+++...+... .. +. ....+.|.+......+.+.|...+
T Consensus 208 l~C~~~g~p~p~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a 271 (290)
T 2o26_X 208 VVCTIKDVSTSVNSMWLKMNPQPQHIAQVKHNSWHRGDFNYERQETLTISSARVDDSGVFMCYA 271 (290)
T ss_dssp EEEEEEESSTTCEEEEEEESSSEEECCCEECCEEEEETTEEEEEEEEEESSCCSSSCEEEEEEE
T ss_pred EEEEEecCCcceeEEEecCCCCCccceeecccccccCceeeEEEEEEEEcCCCcccCeEEEEEE
Confidence 33444322212235555543220 01 11 112445556565667788887765
Done!