Your job contains 1 sequence.
>psy4698
MAEQRGDNWEDPKNGPAENEAEQPAYNGPPGMAVDGLIETNWDHVAENFDDMELSEELLR
GIYAYGFEKPSAIQQRAIIPCVRGNDVIAQAQSGTGKTATFSISILQQVDQNIKECQALI
LAPTRELAQQIQKVVIALGDFMSVSCHACIGGTIVRDDIRKLEAGAQVVVGTPGRVFDMI
SRGALSTKQIRMFVLDEADEMLSRGFKDQIYDVFKHLNNDVQVILLSATMPADVLDVSMK
FMRDPIKILVKKEELTLE
The BLAST search returned 5 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy4698
(258 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|F8WFX2 - symbol:Eif4a2 "Eukaryotic initiation f... 902 1.9e-90 1
ZFIN|ZDB-GENE-040426-2802 - symbol:eif4a2 "eukaryotic tra... 902 1.9e-90 1
UNIPROTKB|Q3SZ65 - symbol:EIF4A2 "Eukaryotic initiation f... 901 2.5e-90 1
UNIPROTKB|E2R3J1 - symbol:EIF4A2 "Uncharacterized protein... 901 2.5e-90 1
UNIPROTKB|E7EQG2 - symbol:EIF4A2 "Eukaryotic initiation f... 901 2.5e-90 1
UNIPROTKB|Q14240 - symbol:EIF4A2 "Eukaryotic initiation f... 901 2.5e-90 1
UNIPROTKB|A6M930 - symbol:EIF4A2 "Eukaryotic translation ... 901 2.5e-90 1
MGI|MGI:106906 - symbol:Eif4a2 "eukaryotic translation in... 901 2.5e-90 1
RGD|1309225 - symbol:Eif4a2 "eukaryotic translation initi... 901 2.5e-90 1
UNIPROTKB|Q3SZ54 - symbol:EIF4A1 "Eukaryotic initiation f... 900 3.1e-90 1
UNIPROTKB|F1P895 - symbol:EIF4A1 "Uncharacterized protein... 900 3.1e-90 1
UNIPROTKB|J9NY67 - symbol:EIF4A1 "Uncharacterized protein... 900 3.1e-90 1
UNIPROTKB|J3KT12 - symbol:EIF4A1 "Eukaryotic initiation f... 900 3.1e-90 1
UNIPROTKB|P60842 - symbol:EIF4A1 "Eukaryotic initiation f... 900 3.1e-90 1
UNIPROTKB|A6M928 - symbol:EIF4A1 "Uncharacterized protein... 900 3.1e-90 1
MGI|MGI:95303 - symbol:Eif4a1 "eukaryotic translation ini... 900 3.1e-90 1
UNIPROTKB|Q6P3V8 - symbol:Eif4a1 "Protein Eif4a1" species... 900 3.1e-90 1
UNIPROTKB|Q8JFP1 - symbol:EIF4A2 "Eukaryotic initiation f... 896 8.3e-90 1
ZFIN|ZDB-GENE-031030-2 - symbol:eif4a1a "eukaryotic trans... 896 8.3e-90 1
FB|FBgn0001942 - symbol:eIF-4a "Eukaryotic initiation fac... 887 7.5e-89 1
ZFIN|ZDB-GENE-040120-6 - symbol:eif4a1b "eukaryotic trans... 883 2.0e-88 1
UNIPROTKB|J3QS69 - symbol:EIF4A1 "Eukaryotic initiation f... 880 4.1e-88 1
UNIPROTKB|J3KTB5 - symbol:EIF4A1 "Eukaryotic initiation f... 876 1.1e-87 1
ASPGD|ASPL0000037981 - symbol:AN2932 species:162425 "Emer... 855 1.8e-85 1
POMBASE|SPAC1006.07 - symbol:SPAC1006.07 "translation ini... 855 1.8e-85 1
UNIPROTKB|A4QVP2 - symbol:TIF1 "ATP-dependent RNA helicas... 853 3.0e-85 1
WB|WBGene00002083 - symbol:inf-1 species:6239 "Caenorhabd... 840 7.2e-84 1
UNIPROTKB|I3LLD5 - symbol:I3LLD5 "Uncharacterized protein... 836 1.9e-83 1
UNIPROTKB|J3QL43 - symbol:EIF4A1 "Eukaryotic initiation f... 749 3.1e-74 1
FB|FBgn0037573 - symbol:eIF4AIII "eIF4AIII" species:7227 ... 746 6.5e-74 1
DICTYBASE|DDB_G0269146 - symbol:ifdA "eukaryotic translat... 743 1.4e-73 1
GENEDB_PFALCIPARUM|PF14_0655 - symbol:PF14_0655 "RNA heli... 742 1.7e-73 1
UNIPROTKB|Q8IKF0 - symbol:H45 "Helicase 45" species:36329... 742 1.7e-73 1
UNIPROTKB|Q5ZM36 - symbol:EIF4A3 "Eukaryotic initiation f... 741 2.2e-73 1
UNIPROTKB|Q2NL22 - symbol:EIF4A3 "Eukaryotic initiation f... 741 2.2e-73 1
UNIPROTKB|E2RDZ4 - symbol:EIF4A3 "Uncharacterized protein... 741 2.2e-73 1
UNIPROTKB|P38919 - symbol:EIF4A3 "Eukaryotic initiation f... 741 2.2e-73 1
UNIPROTKB|A6M931 - symbol:EIF4A3 "Eukaryotic initiation f... 741 2.2e-73 1
RGD|1591139 - symbol:Eif4a3 "eukaryotic translation initi... 741 2.2e-73 1
TAIR|locus:2030285 - symbol:AT1G72730 species:3702 "Arabi... 739 3.6e-73 1
TAIR|locus:2088237 - symbol:EIF4A1 "eukaryotic translatio... 738 4.6e-73 1
ZFIN|ZDB-GENE-040426-915 - symbol:eif4a3 "eukaryotic tran... 738 4.6e-73 1
WB|WBGene00018007 - symbol:F33D11.10 species:6239 "Caenor... 737 5.9e-73 1
UNIPROTKB|J3QR64 - symbol:EIF4A1 "Eukaryotic initiation f... 736 7.5e-73 1
WB|WBGene00022029 - symbol:Y65B4A.6 species:6239 "Caenorh... 736 7.5e-73 1
TAIR|locus:2020078 - symbol:EIF4A-2 "eif4a-2" species:370... 734 1.2e-72 1
ASPGD|ASPL0000014018 - symbol:fal1 species:162425 "Emeric... 722 2.3e-71 1
CGD|CAL0004095 - symbol:TIF species:5476 "Candida albican... 720 3.7e-71 1
UNIPROTKB|P87206 - symbol:TIF1 "ATP-dependent RNA helicas... 720 3.7e-71 1
SGD|S000001767 - symbol:TIF1 "Translation initiation fact... 717 7.7e-71 1
SGD|S000003674 - symbol:TIF2 "Translation initiation fact... 717 7.7e-71 1
UNIPROTKB|J9NU36 - symbol:EIF4A1 "Uncharacterized protein... 709 5.5e-70 1
POMBASE|SPAC1F5.10 - symbol:SPAC1F5.10 "ATP-dependent RNA... 702 3.0e-69 1
UNIPROTKB|F1RZ83 - symbol:EIF4A3 "Eukaryotic initiation f... 689 7.2e-68 1
DICTYBASE|DDB_G0269192 - symbol:tifA "eukaryotic translat... 681 5.1e-67 1
UNIPROTKB|J3KS25 - symbol:EIF4A1 "Eukaryotic initiation f... 678 1.1e-66 1
TAIR|locus:2091191 - symbol:EIF4A-III "eukaryotic initiat... 675 2.2e-66 1
CGD|CAL0001638 - symbol:FAL1 species:5476 "Candida albica... 667 1.5e-65 1
TAIR|locus:2008296 - symbol:AT1G51380 species:3702 "Arabi... 650 9.7e-64 1
UNIPROTKB|J3QLN6 - symbol:EIF4A1 "Eukaryotic initiation f... 639 1.4e-62 1
SGD|S000002428 - symbol:FAL1 "Nucleolar protein required ... 628 2.1e-61 1
GENEDB_PFALCIPARUM|PFD1070w - symbol:PFD1070w "eukaryotic... 618 2.4e-60 1
UNIPROTKB|Q8IFN9 - symbol:PFD1070w "Eukaryotic initiation... 618 2.4e-60 1
UNIPROTKB|F1NTS2 - symbol:EIF4A3 "Eukaryotic initiation f... 562 2.1e-54 1
UNIPROTKB|E1BSE5 - symbol:EIF4A3 "Eukaryotic initiation f... 557 7.0e-54 1
WB|WBGene00018997 - symbol:F57B9.3 species:6239 "Caenorha... 522 3.6e-50 1
UNIPROTKB|J3QKZ9 - symbol:EIF4A1 "Eukaryotic initiation f... 515 2.0e-49 1
UNIPROTKB|F1LP27 - symbol:Eif4a2 "Eukaryotic initiation f... 488 1.4e-46 1
UNIPROTKB|Q9NZE6 - symbol:EIF4A2 "BM-010" species:9606 "H... 485 3.0e-46 1
UNIPROTKB|J3KSZ0 - symbol:EIF4A1 "Eukaryotic initiation f... 471 9.1e-45 1
SGD|S000002319 - symbol:DHH1 "Cytoplasmic DExD/H-box heli... 443 8.4e-42 1
UNIPROTKB|J3KSN7 - symbol:EIF4A2 "Eukaryotic initiation f... 440 1.7e-41 1
CGD|CAL0006152 - symbol:DHH1 species:5476 "Candida albica... 429 2.6e-40 1
UNIPROTKB|Q5AAW3 - symbol:DHH1 "ATP-dependent RNA helicas... 429 2.6e-40 1
TAIR|locus:2127043 - symbol:RH8 "RNAhelicase-like 8" spec... 412 1.6e-38 1
UNIPROTKB|A4R715 - symbol:DHH1 "ATP-dependent RNA helicas... 407 5.5e-38 1
TAIR|locus:2098886 - symbol:AT3G61240 species:3702 "Arabi... 405 8.9e-38 1
FB|FBgn0004419 - symbol:me31B "maternal expression at 31B... 404 1.1e-37 1
CGD|CAL0000067 - symbol:DBP5 species:5476 "Candida albica... 403 1.5e-37 1
TIGR_CMR|CPS_1726 - symbol:CPS_1726 "RNA helicase DeaD" s... 405 1.7e-37 1
UNIPROTKB|Q5L3G9 - symbol:cshA "DEAD-box ATP-dependent RN... 402 1.9e-37 1
TAIR|locus:2050715 - symbol:AT2G45810 species:3702 "Arabi... 401 2.4e-37 1
POMBASE|SPBC776.09 - symbol:ste13 "ATP-dependent RNA heli... 397 6.3e-37 1
ASPGD|ASPL0000036135 - symbol:AN10417 species:162425 "Eme... 396 8.0e-37 1
UNIPROTKB|B4E102 - symbol:EIF4A1 "cDNA FLJ57766, moderate... 395 1.0e-36 1
UNIPROTKB|P54824 - symbol:ddx6 "ATP-dependent RNA helicas... 395 1.0e-36 1
ZFIN|ZDB-GENE-070912-83 - symbol:ddx6 "DEAD (Asp-Glu-Ala-... 395 1.0e-36 1
DICTYBASE|DDB_G0291804 - symbol:ddx6 "DEAD/DEAH box helic... 394 1.3e-36 1
ASPGD|ASPL0000065093 - symbol:AN7659 species:162425 "Emer... 393 1.7e-36 1
UNIPROTKB|Q5ZKB9 - symbol:DDX6 "Probable ATP-dependent RN... 392 2.1e-36 1
POMBASE|SPBC12C2.06 - symbol:SPBC12C2.06 "cytoplasmic ATP... 391 2.7e-36 1
ZFIN|ZDB-GENE-030131-6611 - symbol:wu:fk48d07 "wu:fk48d07... 391 2.7e-36 1
UNIPROTKB|E1BDM8 - symbol:DDX6 "Uncharacterized protein" ... 390 3.5e-36 1
UNIPROTKB|E2RR01 - symbol:DDX6 "Uncharacterized protein" ... 390 3.5e-36 1
UNIPROTKB|P26196 - symbol:DDX6 "Probable ATP-dependent RN... 390 3.5e-36 1
UNIPROTKB|F1SAJ5 - symbol:DDX6 "Uncharacterized protein" ... 390 3.5e-36 1
MGI|MGI:104976 - symbol:Ddx6 "DEAD (Asp-Glu-Ala-Asp) box ... 390 3.5e-36 1
RGD|1564560 - symbol:Ddx6 "DEAD (Asp-Glu-Ala-Asp) box hel... 390 3.5e-36 1
UNIPROTKB|Q11039 - symbol:deaD "Cold-shock DEAD box prote... 389 4.6e-36 1
UNIPROTKB|E1C8R1 - symbol:DDX6 "Probable ATP-dependent RN... 387 7.2e-36 1
WARNING: Descriptions of 752 database sequences were not reported due to the
limiting value of parameter V = 100.
>UNIPROTKB|F8WFX2 [details] [associations]
symbol:Eif4a2 "Eukaryotic initiation factor 4A-II"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 RGD:1309225 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00530000062880
OMA:TENDARQ IPI:IPI00193595 ProteinModelPortal:F8WFX2 PRIDE:F8WFX2
Ensembl:ENSRNOT00000002484 Uniprot:F8WFX2
Length = 408
Score = 902 (322.6 bits), Expect = 1.9e-90, P = 1.9e-90
Identities = 174/245 (71%), Positives = 210/245 (85%)
Query: 15 GPAENEAEQPAYNGPPGMAVDGLIETNWDHVAENFDDMELSEELLRGIYAYGFEKPSAIQ 74
G A+ + + + GP GM DG+IE+NW+ + +NFDDM L E LLRGIYAYGFEKPSAIQ
Sbjct: 4 GSADYNSRE--HGGPEGMDPDGVIESNWNEIVDNFDDMNLKESLLRGIYAYGFEKPSAIQ 61
Query: 75 QRAIIPCVRGNDVIAQAQSGTGKTATFSISILQQVDQNIKECQALILAPTRELAQQIQKV 134
QRAIIPC++G DVIAQAQSGTGKTATF+ISILQQ++ KE QAL+LAPTRELAQQIQKV
Sbjct: 62 QRAIIPCIKGYDVIAQAQSGTGKTATFAISILQQLEIEFKETQALVLAPTRELAQQIQKV 121
Query: 135 VIALGDFMSVSCHACIGGTIVRDDIRKLEAGA-QVVVGTPGRVFDMISRGALSTKQIRMF 193
++ALGD+M +CHACIGGT VR++++KL+A A +VVGTPGRVFDM++R LS K I+MF
Sbjct: 122 ILALGDYMGATCHACIGGTNVRNEMQKLQAEAPHIVVGTPGRVFDMLNRRYLSPKWIKMF 181
Query: 194 VLDEADEMLSRGFKDQIYDVFKHLNNDVQVILLSATMPADVLDVSMKFMRDPIKILVKKE 253
VLDEADEMLSRGFKDQIY++F+ LN +QV+LLSATMP DVL+V+ KFMRDPI+ILVKKE
Sbjct: 182 VLDEADEMLSRGFKDQIYEIFQKLNTSIQVVLLSATMPTDVLEVTKKFMRDPIRILVKKE 241
Query: 254 ELTLE 258
ELTLE
Sbjct: 242 ELTLE 246
>ZFIN|ZDB-GENE-040426-2802 [details] [associations]
symbol:eif4a2 "eukaryotic translation initiation
factor 4A, isoform 2" species:7955 "Danio rerio" [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003743 "translation
initiation factor activity" evidence=IEA] [GO:0006413
"translational initiation" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-040426-2802 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00530000062880
EMBL:CT027646 EMBL:CU929049 IPI:IPI00507769
ProteinModelPortal:F1R166 Ensembl:ENSDART00000130781
ArrayExpress:F1R166 Bgee:F1R166 Uniprot:F1R166
Length = 411
Score = 902 (322.6 bits), Expect = 1.9e-90, P = 1.9e-90
Identities = 174/247 (70%), Positives = 213/247 (86%)
Query: 14 NGPAE-NEAEQPAYNGPPGMAVDGLIETNWDHVAENFDDMELSEELLRGIYAYGFEKPSA 72
+G A+ N + + GP GM DG+IE+NW+ + +NFDDM L E LLRGIYAYGFEKPSA
Sbjct: 3 SGSADYNSSRDRDHGGPEGMEPDGVIESNWNEITDNFDDMNLKETLLRGIYAYGFEKPSA 62
Query: 73 IQQRAIIPCVRGNDVIAQAQSGTGKTATFSISILQQVDQNIKECQALILAPTRELAQQIQ 132
IQQRAIIPC++G DVIAQAQSGTGKTATF+ISILQQ++ KE QAL+LAPTRELAQQIQ
Sbjct: 63 IQQRAIIPCIKGYDVIAQAQSGTGKTATFAISILQQLEIEQKETQALVLAPTRELAQQIQ 122
Query: 133 KVVIALGDFMSVSCHACIGGTIVRDDIRKLEAGA-QVVVGTPGRVFDMISRGALSTKQIR 191
KV++ALGD+M SCHACIGGT VR++++KL+A A +VVGTPGRVFDM++R LS K I+
Sbjct: 123 KVILALGDYMGASCHACIGGTNVRNEMQKLQAEAPHIVVGTPGRVFDMLNRRYLSPKWIK 182
Query: 192 MFVLDEADEMLSRGFKDQIYDVFKHLNNDVQVILLSATMPADVLDVSMKFMRDPIKILVK 251
MFVLDEADEMLSRGFKDQIY++F+ L+ ++QV+LLSATMPADVL+V+ KFMR+P++ILVK
Sbjct: 183 MFVLDEADEMLSRGFKDQIYEIFQKLSTNIQVVLLSATMPADVLEVTTKFMREPVRILVK 242
Query: 252 KEELTLE 258
KEELTLE
Sbjct: 243 KEELTLE 249
>UNIPROTKB|Q3SZ65 [details] [associations]
symbol:EIF4A2 "Eukaryotic initiation factor 4A-II"
species:9913 "Bos taurus" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003743 "translation initiation factor activity" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003743 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG107989 GeneTree:ENSGT00530000062880 KO:K03257
OrthoDB:EOG4640C1 EMBL:BC103106 IPI:IPI00711238
RefSeq:NP_001029216.1 UniGene:Bt.13925 ProteinModelPortal:Q3SZ65
SMR:Q3SZ65 STRING:Q3SZ65 PRIDE:Q3SZ65 Ensembl:ENSBTAT00000019596
GeneID:286819 KEGG:bta:286819 CTD:1974 InParanoid:Q3SZ65
OMA:TENDARQ NextBio:20806473 ArrayExpress:Q3SZ65 Uniprot:Q3SZ65
Length = 407
Score = 901 (322.2 bits), Expect = 2.5e-90, P = 2.5e-90
Identities = 172/234 (73%), Positives = 205/234 (87%)
Query: 26 YNGPPGMAVDGLIETNWDHVAENFDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGN 85
+ GP GM DG+IE+NW+ + +NFDDM L E LLRGIYAYGFEKPSAIQQRAIIPC++G
Sbjct: 12 HGGPEGMDPDGVIESNWNEIVDNFDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGY 71
Query: 86 DVIAQAQSGTGKTATFSISILQQVDQNIKECQALILAPTRELAQQIQKVVIALGDFMSVS 145
DVIAQAQSGTGKTATF+ISILQQ++ KE QAL+LAPTRELAQQIQKV++ALGD+M +
Sbjct: 72 DVIAQAQSGTGKTATFAISILQQLEIEFKETQALVLAPTRELAQQIQKVILALGDYMGAT 131
Query: 146 CHACIGGTIVRDDIRKLEAGA-QVVVGTPGRVFDMISRGALSTKQIRMFVLDEADEMLSR 204
CHACIGGT VR++++KL+A A +VVGTPGRVFDM++R LS K I+MFVLDEADEMLSR
Sbjct: 132 CHACIGGTNVRNEMQKLQAEAPHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADEMLSR 191
Query: 205 GFKDQIYDVFKHLNNDVQVILLSATMPADVLDVSMKFMRDPIKILVKKEELTLE 258
GFKDQIY++F+ LN +QV+LLSATMP DVL+V+ KFMRDPI+ILVKKEELTLE
Sbjct: 192 GFKDQIYEIFQKLNTSIQVVLLSATMPTDVLEVTKKFMRDPIRILVKKEELTLE 245
>UNIPROTKB|E2R3J1 [details] [associations]
symbol:EIF4A2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00530000062880 KO:K03257 CTD:1974 OMA:TENDARQ
EMBL:AAEX03017297 RefSeq:XP_860499.2 ProteinModelPortal:E2R3J1
SMR:E2R3J1 PRIDE:E2R3J1 Ensembl:ENSCAFT00000021683 GeneID:488118
KEGG:cfa:488118 NextBio:20861546 Uniprot:E2R3J1
Length = 407
Score = 901 (322.2 bits), Expect = 2.5e-90, P = 2.5e-90
Identities = 172/234 (73%), Positives = 205/234 (87%)
Query: 26 YNGPPGMAVDGLIETNWDHVAENFDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGN 85
+ GP GM DG+IE+NW+ + +NFDDM L E LLRGIYAYGFEKPSAIQQRAIIPC++G
Sbjct: 12 HGGPEGMDPDGVIESNWNEIVDNFDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGY 71
Query: 86 DVIAQAQSGTGKTATFSISILQQVDQNIKECQALILAPTRELAQQIQKVVIALGDFMSVS 145
DVIAQAQSGTGKTATF+ISILQQ++ KE QAL+LAPTRELAQQIQKV++ALGD+M +
Sbjct: 72 DVIAQAQSGTGKTATFAISILQQLEIEFKETQALVLAPTRELAQQIQKVILALGDYMGAT 131
Query: 146 CHACIGGTIVRDDIRKLEAGA-QVVVGTPGRVFDMISRGALSTKQIRMFVLDEADEMLSR 204
CHACIGGT VR++++KL+A A +VVGTPGRVFDM++R LS K I+MFVLDEADEMLSR
Sbjct: 132 CHACIGGTNVRNEMQKLQAEAPHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADEMLSR 191
Query: 205 GFKDQIYDVFKHLNNDVQVILLSATMPADVLDVSMKFMRDPIKILVKKEELTLE 258
GFKDQIY++F+ LN +QV+LLSATMP DVL+V+ KFMRDPI+ILVKKEELTLE
Sbjct: 192 GFKDQIYEIFQKLNTSIQVVLLSATMPTDVLEVTKKFMRDPIRILVKKEELTLE 245
>UNIPROTKB|E7EQG2 [details] [associations]
symbol:EIF4A2 "Eukaryotic initiation factor 4A-II"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 EMBL:AC112907 HGNC:HGNC:3284 ChiTaRS:EIF4A2
IPI:IPI00924536 ProteinModelPortal:E7EQG2 SMR:E7EQG2 PRIDE:E7EQG2
Ensembl:ENST00000425053 ArrayExpress:E7EQG2 Bgee:E7EQG2
Uniprot:E7EQG2
Length = 362
Score = 901 (322.2 bits), Expect = 2.5e-90, P = 2.5e-90
Identities = 172/234 (73%), Positives = 205/234 (87%)
Query: 26 YNGPPGMAVDGLIETNWDHVAENFDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGN 85
+ GP GM DG+IE+NW+ + +NFDDM L E LLRGIYAYGFEKPSAIQQRAIIPC++G
Sbjct: 12 HGGPEGMDPDGVIESNWNEIVDNFDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGY 71
Query: 86 DVIAQAQSGTGKTATFSISILQQVDQNIKECQALILAPTRELAQQIQKVVIALGDFMSVS 145
DVIAQAQSGTGKTATF+ISILQQ++ KE QAL+LAPTRELAQQIQKV++ALGD+M +
Sbjct: 72 DVIAQAQSGTGKTATFAISILQQLEIEFKETQALVLAPTRELAQQIQKVILALGDYMGAT 131
Query: 146 CHACIGGTIVRDDIRKLEAGA-QVVVGTPGRVFDMISRGALSTKQIRMFVLDEADEMLSR 204
CHACIGGT VR++++KL+A A +VVGTPGRVFDM++R LS K I+MFVLDEADEMLSR
Sbjct: 132 CHACIGGTNVRNEMQKLQAEAPHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADEMLSR 191
Query: 205 GFKDQIYDVFKHLNNDVQVILLSATMPADVLDVSMKFMRDPIKILVKKEELTLE 258
GFKDQIY++F+ LN +QV+LLSATMP DVL+V+ KFMRDPI+ILVKKEELTLE
Sbjct: 192 GFKDQIYEIFQKLNTSIQVVLLSATMPTDVLEVTKKFMRDPIRILVKKEELTLE 245
>UNIPROTKB|Q14240 [details] [associations]
symbol:EIF4A2 "Eukaryotic initiation factor 4A-II"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003743 "translation initiation factor
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0004386
"helicase activity" evidence=TAS] [GO:0006446 "regulation of
translational initiation" evidence=TAS] [GO:0016281 "eukaryotic
translation initiation factor 4F complex" evidence=TAS] [GO:0000288
"nuclear-transcribed mRNA catabolic process,
deadenylation-dependent decay" evidence=TAS] [GO:0000289
"nuclear-transcribed mRNA poly(A) tail shortening" evidence=TAS]
[GO:0005829 "cytosol" evidence=TAS] [GO:0006412 "translation"
evidence=TAS] [GO:0006413 "translational initiation" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016070 "RNA
metabolic process" evidence=TAS] [GO:0016071 "mRNA metabolic
process" evidence=TAS] [GO:0019221 "cytokine-mediated signaling
pathway" evidence=TAS] [GO:0044267 "cellular protein metabolic
process" evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
Reactome:REACT_71 Reactome:REACT_21257 Reactome:REACT_17015
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005829 GO:GO:0005524 Reactome:REACT_6900
GO:GO:0019048 GO:GO:0006446 GO:GO:0016281 EMBL:CH471052
GO:GO:0019221 GO:GO:0004386 GO:GO:0003743 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 GO:GO:0000289
eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 HOVERGEN:HBG107989 Reactome:REACT_1762 KO:K03257
CTD:1974 OMA:TENDARQ EMBL:D30655 EMBL:BT009860 EMBL:AC112907
EMBL:BC012547 EMBL:BC013708 EMBL:BC015842 EMBL:BC048105
IPI:IPI00328328 IPI:IPI00409717 RefSeq:NP_001958.2
UniGene:Hs.518475 UniGene:Hs.599481 PDB:3BOR PDBsum:3BOR
ProteinModelPortal:Q14240 SMR:Q14240 IntAct:Q14240 MINT:MINT-202114
STRING:Q14240 PhosphoSite:Q14240 DMDM:45645183 PaxDb:Q14240
PRIDE:Q14240 DNASU:1974 Ensembl:ENST00000323963
Ensembl:ENST00000440191 GeneID:1974 KEGG:hsa:1974 UCSC:uc003fqs.3
UCSC:uc003fqu.3 GeneCards:GC03P186539 H-InvDB:HIX0003899
HGNC:HGNC:3284 HPA:CAB011690 MIM:601102 neXtProt:NX_Q14240
PharmGKB:PA27712 InParanoid:Q14240 PhylomeDB:Q14240 ChiTaRS:EIF4A2
EvolutionaryTrace:Q14240 GenomeRNAi:1974 NextBio:7991
PMAP-CutDB:Q14240 ArrayExpress:Q14240 Bgee:Q14240 CleanEx:HS_EIF4A2
Genevestigator:Q14240 GermOnline:ENSG00000156976 Uniprot:Q14240
Length = 407
Score = 901 (322.2 bits), Expect = 2.5e-90, P = 2.5e-90
Identities = 172/234 (73%), Positives = 205/234 (87%)
Query: 26 YNGPPGMAVDGLIETNWDHVAENFDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGN 85
+ GP GM DG+IE+NW+ + +NFDDM L E LLRGIYAYGFEKPSAIQQRAIIPC++G
Sbjct: 12 HGGPEGMDPDGVIESNWNEIVDNFDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGY 71
Query: 86 DVIAQAQSGTGKTATFSISILQQVDQNIKECQALILAPTRELAQQIQKVVIALGDFMSVS 145
DVIAQAQSGTGKTATF+ISILQQ++ KE QAL+LAPTRELAQQIQKV++ALGD+M +
Sbjct: 72 DVIAQAQSGTGKTATFAISILQQLEIEFKETQALVLAPTRELAQQIQKVILALGDYMGAT 131
Query: 146 CHACIGGTIVRDDIRKLEAGA-QVVVGTPGRVFDMISRGALSTKQIRMFVLDEADEMLSR 204
CHACIGGT VR++++KL+A A +VVGTPGRVFDM++R LS K I+MFVLDEADEMLSR
Sbjct: 132 CHACIGGTNVRNEMQKLQAEAPHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADEMLSR 191
Query: 205 GFKDQIYDVFKHLNNDVQVILLSATMPADVLDVSMKFMRDPIKILVKKEELTLE 258
GFKDQIY++F+ LN +QV+LLSATMP DVL+V+ KFMRDPI+ILVKKEELTLE
Sbjct: 192 GFKDQIYEIFQKLNTSIQVVLLSATMPTDVLEVTKKFMRDPIRILVKKEELTLE 245
>UNIPROTKB|A6M930 [details] [associations]
symbol:EIF4A2 "Eukaryotic translation initiation factor 4A
isoform 2" species:9823 "Sus scrofa" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003743 "translation initiation factor activity"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003743
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107989
GeneTree:ENSGT00530000062880 KO:K03257 CTD:1974 OMA:TENDARQ
EMBL:CU633961 EMBL:DQ351285 RefSeq:NP_001093665.1 UniGene:Ssc.10843
ProteinModelPortal:A6M930 SMR:A6M930 PRIDE:A6M930
Ensembl:ENSSSCT00000012915 GeneID:100101928 KEGG:ssc:100101928
Uniprot:A6M930
Length = 407
Score = 901 (322.2 bits), Expect = 2.5e-90, P = 2.5e-90
Identities = 172/234 (73%), Positives = 205/234 (87%)
Query: 26 YNGPPGMAVDGLIETNWDHVAENFDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGN 85
+ GP GM DG+IE+NW+ + +NFDDM L E LLRGIYAYGFEKPSAIQQRAIIPC++G
Sbjct: 12 HGGPEGMDPDGVIESNWNEIVDNFDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGY 71
Query: 86 DVIAQAQSGTGKTATFSISILQQVDQNIKECQALILAPTRELAQQIQKVVIALGDFMSVS 145
DVIAQAQSGTGKTATF+ISILQQ++ KE QAL+LAPTRELAQQIQKV++ALGD+M +
Sbjct: 72 DVIAQAQSGTGKTATFAISILQQLEIEFKETQALVLAPTRELAQQIQKVILALGDYMGAT 131
Query: 146 CHACIGGTIVRDDIRKLEAGA-QVVVGTPGRVFDMISRGALSTKQIRMFVLDEADEMLSR 204
CHACIGGT VR++++KL+A A +VVGTPGRVFDM++R LS K I+MFVLDEADEMLSR
Sbjct: 132 CHACIGGTNVRNEMQKLQAEAPHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADEMLSR 191
Query: 205 GFKDQIYDVFKHLNNDVQVILLSATMPADVLDVSMKFMRDPIKILVKKEELTLE 258
GFKDQIY++F+ LN +QV+LLSATMP DVL+V+ KFMRDPI+ILVKKEELTLE
Sbjct: 192 GFKDQIYEIFQKLNTSIQVVLLSATMPTDVLEVTKKFMRDPIRILVKKEELTLE 245
>MGI|MGI:106906 [details] [associations]
symbol:Eif4a2 "eukaryotic translation initiation factor 4A2"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003743 "translation
initiation factor activity" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0006413 "translational
initiation" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 MGI:MGI:106906 GO:GO:0005524
GO:GO:0003743 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107989
GeneTree:ENSGT00530000062880 KO:K03257 OrthoDB:EOG4640C1 CTD:1974
OMA:TENDARQ EMBL:X12507 EMBL:X14422 EMBL:X56953 EMBL:AK076509
EMBL:U64706 IPI:IPI00400432 IPI:IPI00409918 PIR:S00985
RefSeq:NP_038534.2 UniGene:Mm.260084 ProteinModelPortal:P10630
SMR:P10630 IntAct:P10630 STRING:P10630 PhosphoSite:P10630
PaxDb:P10630 PRIDE:P10630 Ensembl:ENSMUST00000023599
Ensembl:ENSMUST00000115341 GeneID:13682 KEGG:mmu:13682
NextBio:284442 Bgee:P10630 CleanEx:MM_EIF4A2 Genevestigator:P10630
GermOnline:ENSMUSG00000022884 Uniprot:P10630
Length = 407
Score = 901 (322.2 bits), Expect = 2.5e-90, P = 2.5e-90
Identities = 172/234 (73%), Positives = 205/234 (87%)
Query: 26 YNGPPGMAVDGLIETNWDHVAENFDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGN 85
+ GP GM DG+IE+NW+ + +NFDDM L E LLRGIYAYGFEKPSAIQQRAIIPC++G
Sbjct: 12 HGGPEGMDPDGVIESNWNEIVDNFDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGY 71
Query: 86 DVIAQAQSGTGKTATFSISILQQVDQNIKECQALILAPTRELAQQIQKVVIALGDFMSVS 145
DVIAQAQSGTGKTATF+ISILQQ++ KE QAL+LAPTRELAQQIQKV++ALGD+M +
Sbjct: 72 DVIAQAQSGTGKTATFAISILQQLEIEFKETQALVLAPTRELAQQIQKVILALGDYMGAT 131
Query: 146 CHACIGGTIVRDDIRKLEAGA-QVVVGTPGRVFDMISRGALSTKQIRMFVLDEADEMLSR 204
CHACIGGT VR++++KL+A A +VVGTPGRVFDM++R LS K I+MFVLDEADEMLSR
Sbjct: 132 CHACIGGTNVRNEMQKLQAEAPHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADEMLSR 191
Query: 205 GFKDQIYDVFKHLNNDVQVILLSATMPADVLDVSMKFMRDPIKILVKKEELTLE 258
GFKDQIY++F+ LN +QV+LLSATMP DVL+V+ KFMRDPI+ILVKKEELTLE
Sbjct: 192 GFKDQIYEIFQKLNTSIQVVLLSATMPTDVLEVTKKFMRDPIRILVKKEELTLE 245
>RGD|1309225 [details] [associations]
symbol:Eif4a2 "eukaryotic translation initiation factor 4A2"
species:10116 "Rattus norvegicus" [GO:0003743 "translation
initiation factor activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 RGD:1309225 GO:GO:0005524
GO:GO:0003743 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107989 HSSP:P60842
KO:K03257 OrthoDB:EOG4640C1 CTD:1974 EMBL:BC085859 IPI:IPI00193595
RefSeq:NP_001008336.1 UniGene:Rn.143972 ProteinModelPortal:Q5RKI1
SMR:Q5RKI1 STRING:Q5RKI1 PhosphoSite:Q5RKI1
World-2DPAGE:0004:Q5RKI1 PRIDE:Q5RKI1 GeneID:303831 KEGG:rno:303831
UCSC:RGD:1309225 InParanoid:Q5RKI1 NextBio:652169
ArrayExpress:Q5RKI1 Genevestigator:Q5RKI1
GermOnline:ENSRNOG00000001815 Uniprot:Q5RKI1
Length = 407
Score = 901 (322.2 bits), Expect = 2.5e-90, P = 2.5e-90
Identities = 172/234 (73%), Positives = 205/234 (87%)
Query: 26 YNGPPGMAVDGLIETNWDHVAENFDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGN 85
+ GP GM DG+IE+NW+ + +NFDDM L E LLRGIYAYGFEKPSAIQQRAIIPC++G
Sbjct: 12 HGGPEGMDPDGVIESNWNEIVDNFDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGY 71
Query: 86 DVIAQAQSGTGKTATFSISILQQVDQNIKECQALILAPTRELAQQIQKVVIALGDFMSVS 145
DVIAQAQSGTGKTATF+ISILQQ++ KE QAL+LAPTRELAQQIQKV++ALGD+M +
Sbjct: 72 DVIAQAQSGTGKTATFAISILQQLEIEFKETQALVLAPTRELAQQIQKVILALGDYMGAT 131
Query: 146 CHACIGGTIVRDDIRKLEAGA-QVVVGTPGRVFDMISRGALSTKQIRMFVLDEADEMLSR 204
CHACIGGT VR++++KL+A A +VVGTPGRVFDM++R LS K I+MFVLDEADEMLSR
Sbjct: 132 CHACIGGTNVRNEMQKLQAEAPHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADEMLSR 191
Query: 205 GFKDQIYDVFKHLNNDVQVILLSATMPADVLDVSMKFMRDPIKILVKKEELTLE 258
GFKDQIY++F+ LN +QV+LLSATMP DVL+V+ KFMRDPI+ILVKKEELTLE
Sbjct: 192 GFKDQIYEIFQKLNTSIQVVLLSATMPTDVLEVTKKFMRDPIRILVKKEELTLE 245
>UNIPROTKB|Q3SZ54 [details] [associations]
symbol:EIF4A1 "Eukaryotic initiation factor 4A-I"
species:9913 "Bos taurus" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003743 "translation initiation factor activity" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003743 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG107989 GeneTree:ENSGT00530000062880 EMBL:BC103130
IPI:IPI00698793 RefSeq:NP_001029400.1 UniGene:Bt.14169
ProteinModelPortal:Q3SZ54 SMR:Q3SZ54 STRING:Q3SZ54 PRIDE:Q3SZ54
Ensembl:ENSBTAT00000000144 GeneID:504958 KEGG:bta:504958 CTD:1973
InParanoid:Q3SZ54 KO:K03257 OMA:IKMFILD OrthoDB:EOG4640C1
NextBio:20866906 Uniprot:Q3SZ54
Length = 406
Score = 900 (321.9 bits), Expect = 3.1e-90, P = 3.1e-90
Identities = 171/233 (73%), Positives = 207/233 (88%)
Query: 27 NGPPGMAVDGLIETNWDHVAENFDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGND 86
NGP GM +G+IE+NW+ + ++FDDM LSE LLRGIYAYGFEKPSAIQQRAI+PC++G D
Sbjct: 12 NGPDGMEPEGVIESNWNEIVDSFDDMNLSESLLRGIYAYGFEKPSAIQQRAILPCIKGYD 71
Query: 87 VIAQAQSGTGKTATFSISILQQVDQNIKECQALILAPTRELAQQIQKVVIALGDFMSVSC 146
VIAQAQSGTGKTATF+ISILQQ++ ++K QAL+LAPTRELAQQIQKVV+ALGD+M SC
Sbjct: 72 VIAQAQSGTGKTATFAISILQQIELDLKATQALVLAPTRELAQQIQKVVMALGDYMGASC 131
Query: 147 HACIGGTIVRDDIRKLEAGA-QVVVGTPGRVFDMISRGALSTKQIRMFVLDEADEMLSRG 205
HACIGGT VR +++KL+ A ++VGTPGRVFDM++R LS K I+MFVLDEADEMLSRG
Sbjct: 132 HACIGGTNVRAEVQKLQMEAPHIIVGTPGRVFDMLNRRYLSPKYIKMFVLDEADEMLSRG 191
Query: 206 FKDQIYDVFKHLNNDVQVILLSATMPADVLDVSMKFMRDPIKILVKKEELTLE 258
FKDQIYD+F+ LN++ QV+LLSATMP+DVL+V+ KFMRDPI+ILVKKEELTLE
Sbjct: 192 FKDQIYDIFQKLNSNTQVVLLSATMPSDVLEVTKKFMRDPIRILVKKEELTLE 244
>UNIPROTKB|F1P895 [details] [associations]
symbol:EIF4A1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00530000062880 OMA:PILEMED EMBL:AAEX03003619
EMBL:AAEX03003621 EMBL:AAEX03003620 Ensembl:ENSCAFT00000026357
Uniprot:F1P895
Length = 406
Score = 900 (321.9 bits), Expect = 3.1e-90, P = 3.1e-90
Identities = 171/233 (73%), Positives = 207/233 (88%)
Query: 27 NGPPGMAVDGLIETNWDHVAENFDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGND 86
NGP GM +G+IE+NW+ + ++FDDM LSE LLRGIYAYGFEKPSAIQQRAI+PC++G D
Sbjct: 12 NGPDGMEPEGVIESNWNEIVDSFDDMNLSESLLRGIYAYGFEKPSAIQQRAILPCIKGYD 71
Query: 87 VIAQAQSGTGKTATFSISILQQVDQNIKECQALILAPTRELAQQIQKVVIALGDFMSVSC 146
VIAQAQSGTGKTATF+ISILQQ++ ++K QAL+LAPTRELAQQIQKVV+ALGD+M SC
Sbjct: 72 VIAQAQSGTGKTATFAISILQQIELDLKATQALVLAPTRELAQQIQKVVMALGDYMGASC 131
Query: 147 HACIGGTIVRDDIRKLEAGA-QVVVGTPGRVFDMISRGALSTKQIRMFVLDEADEMLSRG 205
HACIGGT VR +++KL+ A ++VGTPGRVFDM++R LS K I+MFVLDEADEMLSRG
Sbjct: 132 HACIGGTNVRAEVQKLQMEAPHIIVGTPGRVFDMLNRRYLSPKYIKMFVLDEADEMLSRG 191
Query: 206 FKDQIYDVFKHLNNDVQVILLSATMPADVLDVSMKFMRDPIKILVKKEELTLE 258
FKDQIYD+F+ LN++ QV+LLSATMP+DVL+V+ KFMRDPI+ILVKKEELTLE
Sbjct: 192 FKDQIYDIFQKLNSNTQVVLLSATMPSDVLEVTKKFMRDPIRILVKKEELTLE 244
>UNIPROTKB|J9NY67 [details] [associations]
symbol:EIF4A1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00530000062880 CTD:1973 KO:K03257 OMA:IKMFILD
EMBL:AAEX03006506 EMBL:AAEX03006505 RefSeq:NP_001238871.1
ProteinModelPortal:J9NY67 Ensembl:ENSCAFT00000014379
GeneID:100688577 KEGG:cfa:100688577 Uniprot:J9NY67
Length = 406
Score = 900 (321.9 bits), Expect = 3.1e-90, P = 3.1e-90
Identities = 171/233 (73%), Positives = 207/233 (88%)
Query: 27 NGPPGMAVDGLIETNWDHVAENFDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGND 86
NGP GM +G+IE+NW+ + ++FDDM LSE LLRGIYAYGFEKPSAIQQRAI+PC++G D
Sbjct: 12 NGPDGMEPEGVIESNWNEIVDSFDDMNLSESLLRGIYAYGFEKPSAIQQRAILPCIKGYD 71
Query: 87 VIAQAQSGTGKTATFSISILQQVDQNIKECQALILAPTRELAQQIQKVVIALGDFMSVSC 146
VIAQAQSGTGKTATF+ISILQQ++ ++K QAL+LAPTRELAQQIQKVV+ALGD+M SC
Sbjct: 72 VIAQAQSGTGKTATFAISILQQIELDLKATQALVLAPTRELAQQIQKVVMALGDYMGASC 131
Query: 147 HACIGGTIVRDDIRKLEAGA-QVVVGTPGRVFDMISRGALSTKQIRMFVLDEADEMLSRG 205
HACIGGT VR +++KL+ A ++VGTPGRVFDM++R LS K I+MFVLDEADEMLSRG
Sbjct: 132 HACIGGTNVRAEVQKLQMEAPHIIVGTPGRVFDMLNRRYLSPKYIKMFVLDEADEMLSRG 191
Query: 206 FKDQIYDVFKHLNNDVQVILLSATMPADVLDVSMKFMRDPIKILVKKEELTLE 258
FKDQIYD+F+ LN++ QV+LLSATMP+DVL+V+ KFMRDPI+ILVKKEELTLE
Sbjct: 192 FKDQIYDIFQKLNSNTQVVLLSATMPSDVLEVTKKFMRDPIRILVKKEELTLE 244
>UNIPROTKB|J3KT12 [details] [associations]
symbol:EIF4A1 "Eukaryotic initiation factor 4A-I"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
EMBL:AC016876 HGNC:HGNC:3282 ChiTaRS:EIF4A1
ProteinModelPortal:J3KT12 Ensembl:ENST00000582746 Uniprot:J3KT12
Length = 341
Score = 900 (321.9 bits), Expect = 3.1e-90, P = 3.1e-90
Identities = 171/233 (73%), Positives = 207/233 (88%)
Query: 27 NGPPGMAVDGLIETNWDHVAENFDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGND 86
NGP GM +G+IE+NW+ + ++FDDM LSE LLRGIYAYGFEKPSAIQQRAI+PC++G D
Sbjct: 12 NGPDGMEPEGVIESNWNEIVDSFDDMNLSESLLRGIYAYGFEKPSAIQQRAILPCIKGYD 71
Query: 87 VIAQAQSGTGKTATFSISILQQVDQNIKECQALILAPTRELAQQIQKVVIALGDFMSVSC 146
VIAQAQSGTGKTATF+ISILQQ++ ++K QAL+LAPTRELAQQIQKVV+ALGD+M SC
Sbjct: 72 VIAQAQSGTGKTATFAISILQQIELDLKATQALVLAPTRELAQQIQKVVMALGDYMGASC 131
Query: 147 HACIGGTIVRDDIRKLEAGA-QVVVGTPGRVFDMISRGALSTKQIRMFVLDEADEMLSRG 205
HACIGGT VR +++KL+ A ++VGTPGRVFDM++R LS K I+MFVLDEADEMLSRG
Sbjct: 132 HACIGGTNVRAEVQKLQMEAPHIIVGTPGRVFDMLNRRYLSPKYIKMFVLDEADEMLSRG 191
Query: 206 FKDQIYDVFKHLNNDVQVILLSATMPADVLDVSMKFMRDPIKILVKKEELTLE 258
FKDQIYD+F+ LN++ QV+LLSATMP+DVL+V+ KFMRDPI+ILVKKEELTLE
Sbjct: 192 FKDQIYDIFQKLNSNTQVVLLSATMPSDVLEVTKKFMRDPIRILVKKEELTLE 244
>UNIPROTKB|P60842 [details] [associations]
symbol:EIF4A1 "Eukaryotic initiation factor 4A-I"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003743 "translation initiation factor
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0003729
"mRNA binding" evidence=TAS] [GO:0004386 "helicase activity"
evidence=TAS] [GO:0000339 "RNA cap binding" evidence=TAS]
[GO:0008135 "translation factor activity, nucleic acid binding"
evidence=TAS] [GO:0016281 "eukaryotic translation initiation factor
4F complex" evidence=TAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000288 "nuclear-transcribed mRNA catabolic
process, deadenylation-dependent decay" evidence=TAS] [GO:0000289
"nuclear-transcribed mRNA poly(A) tail shortening" evidence=TAS]
[GO:0005829 "cytosol" evidence=TAS] [GO:0006412 "translation"
evidence=TAS] [GO:0006413 "translational initiation" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016070 "RNA
metabolic process" evidence=TAS] [GO:0016071 "mRNA metabolic
process" evidence=TAS] [GO:0019221 "cytokine-mediated signaling
pathway" evidence=TAS] [GO:0044267 "cellular protein metabolic
process" evidence=TAS] Reactome:REACT_71 Reactome:REACT_21257
Reactome:REACT_17015 InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005829 GO:GO:0005524
Reactome:REACT_6900 EMBL:CH471108 GO:GO:0019048
Pathway_Interaction_DB:mtor_4pathway GO:GO:0006413 GO:GO:0016281
GO:GO:0031100 GO:GO:0003729 GO:GO:0019221 GO:GO:0008135
GO:GO:0004386 GO:GO:0003743 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0000289 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG107989 Reactome:REACT_1762 CTD:1973 KO:K03257
OMA:IKMFILD OrthoDB:EOG4640C1 EMBL:D13748 EMBL:BT019880
EMBL:BT019881 EMBL:AK312630 EMBL:AC016876 EMBL:BC006210
EMBL:BC009585 EMBL:BC073752 IPI:IPI00025491 PIR:S33681
RefSeq:NP_001191439.1 RefSeq:NP_001407.1 UniGene:Hs.129673 PDB:2G9N
PDB:2ZU6 PDB:3EIQ PDBsum:2G9N PDBsum:2ZU6 PDBsum:3EIQ
ProteinModelPortal:P60842 SMR:P60842 DIP:DIP-29755N IntAct:P60842
MINT:MINT-5001111 STRING:P60842 PhosphoSite:P60842 DMDM:46397463
PaxDb:P60842 PRIDE:P60842 DNASU:1973 Ensembl:ENST00000293831
Ensembl:ENST00000577269 GeneID:1973 KEGG:hsa:1973 UCSC:uc002gho.2
GeneCards:GC17P007476 HGNC:HGNC:3282 HPA:CAB011689 MIM:602641
neXtProt:NX_P60842 PharmGKB:PA27710 PhylomeDB:P60842 ChiTaRS:EIF4A1
EvolutionaryTrace:P60842 GenomeRNAi:1973 NextBio:7987
ArrayExpress:P60842 Bgee:P60842 CleanEx:HS_EIF4A1
Genevestigator:P60842 GermOnline:ENSG00000161960 GO:GO:0000339
Uniprot:P60842
Length = 406
Score = 900 (321.9 bits), Expect = 3.1e-90, P = 3.1e-90
Identities = 171/233 (73%), Positives = 207/233 (88%)
Query: 27 NGPPGMAVDGLIETNWDHVAENFDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGND 86
NGP GM +G+IE+NW+ + ++FDDM LSE LLRGIYAYGFEKPSAIQQRAI+PC++G D
Sbjct: 12 NGPDGMEPEGVIESNWNEIVDSFDDMNLSESLLRGIYAYGFEKPSAIQQRAILPCIKGYD 71
Query: 87 VIAQAQSGTGKTATFSISILQQVDQNIKECQALILAPTRELAQQIQKVVIALGDFMSVSC 146
VIAQAQSGTGKTATF+ISILQQ++ ++K QAL+LAPTRELAQQIQKVV+ALGD+M SC
Sbjct: 72 VIAQAQSGTGKTATFAISILQQIELDLKATQALVLAPTRELAQQIQKVVMALGDYMGASC 131
Query: 147 HACIGGTIVRDDIRKLEAGA-QVVVGTPGRVFDMISRGALSTKQIRMFVLDEADEMLSRG 205
HACIGGT VR +++KL+ A ++VGTPGRVFDM++R LS K I+MFVLDEADEMLSRG
Sbjct: 132 HACIGGTNVRAEVQKLQMEAPHIIVGTPGRVFDMLNRRYLSPKYIKMFVLDEADEMLSRG 191
Query: 206 FKDQIYDVFKHLNNDVQVILLSATMPADVLDVSMKFMRDPIKILVKKEELTLE 258
FKDQIYD+F+ LN++ QV+LLSATMP+DVL+V+ KFMRDPI+ILVKKEELTLE
Sbjct: 192 FKDQIYDIFQKLNSNTQVVLLSATMPSDVLEVTKKFMRDPIRILVKKEELTLE 244
>UNIPROTKB|A6M928 [details] [associations]
symbol:EIF4A1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0003743
"translation initiation factor activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003743 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107989
GeneTree:ENSGT00530000062880 CTD:1973 KO:K03257 OMA:IKMFILD
OrthoDB:EOG4640C1 EMBL:CU914279 EMBL:DQ351283 RefSeq:NP_001093666.1
UniGene:Ssc.22034 ProteinModelPortal:A6M928 SMR:A6M928 PRIDE:A6M928
Ensembl:ENSSSCT00000019541 GeneID:100101929 KEGG:ssc:100101929
Uniprot:A6M928
Length = 406
Score = 900 (321.9 bits), Expect = 3.1e-90, P = 3.1e-90
Identities = 171/233 (73%), Positives = 207/233 (88%)
Query: 27 NGPPGMAVDGLIETNWDHVAENFDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGND 86
NGP GM +G+IE+NW+ + ++FDDM LSE LLRGIYAYGFEKPSAIQQRAI+PC++G D
Sbjct: 12 NGPDGMEPEGVIESNWNEIVDSFDDMNLSESLLRGIYAYGFEKPSAIQQRAILPCIKGYD 71
Query: 87 VIAQAQSGTGKTATFSISILQQVDQNIKECQALILAPTRELAQQIQKVVIALGDFMSVSC 146
VIAQAQSGTGKTATF+ISILQQ++ ++K QAL+LAPTRELAQQIQKVV+ALGD+M SC
Sbjct: 72 VIAQAQSGTGKTATFAISILQQIELDLKATQALVLAPTRELAQQIQKVVMALGDYMGASC 131
Query: 147 HACIGGTIVRDDIRKLEAGA-QVVVGTPGRVFDMISRGALSTKQIRMFVLDEADEMLSRG 205
HACIGGT VR +++KL+ A ++VGTPGRVFDM++R LS K I+MFVLDEADEMLSRG
Sbjct: 132 HACIGGTNVRAEVQKLQMEAPHIIVGTPGRVFDMLNRRYLSPKYIKMFVLDEADEMLSRG 191
Query: 206 FKDQIYDVFKHLNNDVQVILLSATMPADVLDVSMKFMRDPIKILVKKEELTLE 258
FKDQIYD+F+ LN++ QV+LLSATMP+DVL+V+ KFMRDPI+ILVKKEELTLE
Sbjct: 192 FKDQIYDIFQKLNSNTQVVLLSATMPSDVLEVTKKFMRDPIRILVKKEELTLE 244
>MGI|MGI:95303 [details] [associations]
symbol:Eif4a1 "eukaryotic translation initiation factor 4A1"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003743 "translation
initiation factor activity" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0006413 "translational
initiation" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 MGI:MGI:95303 GO:GO:0005524
GO:GO:0003743 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107989 CTD:1973
KO:K03257 OMA:IKMFILD OrthoDB:EOG4640C1 EMBL:X03039 EMBL:X03040
EMBL:L36611 EMBL:M22873 EMBL:L36608 EMBL:L36609 EMBL:L36610
EMBL:AB011595 EMBL:AK077429 EMBL:BC049915 IPI:IPI00118676
PIR:JS0039 RefSeq:NP_659207.1 UniGene:Mm.279821 UniGene:Mm.371557
UniGene:Mm.473799 ProteinModelPortal:P60843 SMR:P60843
MINT:MINT-202155 STRING:P60843 PhosphoSite:P60843
REPRODUCTION-2DPAGE:P60843 PaxDb:P60843 PRIDE:P60843
Ensembl:ENSMUST00000163666 GeneID:13681 KEGG:mmu:13681
InParanoid:P60843 NextBio:284438 Bgee:P60843 CleanEx:MM_EIF4A1
Genevestigator:P60843 GermOnline:ENSMUSG00000064241 Uniprot:P60843
Length = 406
Score = 900 (321.9 bits), Expect = 3.1e-90, P = 3.1e-90
Identities = 171/233 (73%), Positives = 207/233 (88%)
Query: 27 NGPPGMAVDGLIETNWDHVAENFDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGND 86
NGP GM +G+IE+NW+ + ++FDDM LSE LLRGIYAYGFEKPSAIQQRAI+PC++G D
Sbjct: 12 NGPDGMEPEGVIESNWNEIVDSFDDMNLSESLLRGIYAYGFEKPSAIQQRAILPCIKGYD 71
Query: 87 VIAQAQSGTGKTATFSISILQQVDQNIKECQALILAPTRELAQQIQKVVIALGDFMSVSC 146
VIAQAQSGTGKTATF+ISILQQ++ ++K QAL+LAPTRELAQQIQKVV+ALGD+M SC
Sbjct: 72 VIAQAQSGTGKTATFAISILQQIELDLKATQALVLAPTRELAQQIQKVVMALGDYMGASC 131
Query: 147 HACIGGTIVRDDIRKLEAGA-QVVVGTPGRVFDMISRGALSTKQIRMFVLDEADEMLSRG 205
HACIGGT VR +++KL+ A ++VGTPGRVFDM++R LS K I+MFVLDEADEMLSRG
Sbjct: 132 HACIGGTNVRAEVQKLQMEAPHIIVGTPGRVFDMLNRRYLSPKYIKMFVLDEADEMLSRG 191
Query: 206 FKDQIYDVFKHLNNDVQVILLSATMPADVLDVSMKFMRDPIKILVKKEELTLE 258
FKDQIYD+F+ LN++ QV+LLSATMP+DVL+V+ KFMRDPI+ILVKKEELTLE
Sbjct: 192 FKDQIYDIFQKLNSNTQVVLLSATMPSDVLEVTKKFMRDPIRILVKKEELTLE 244
>UNIPROTKB|Q6P3V8 [details] [associations]
symbol:Eif4a1 "Protein Eif4a1" species:10116 "Rattus
norvegicus" [GO:0003743 "translation initiation factor activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 RGD:735141
GO:GO:0005524 GO:GO:0003743 EMBL:CH473948 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107989
GeneTree:ENSGT00530000062880 CTD:1973 KO:K03257 OMA:IKMFILD
OrthoDB:EOG4640C1 EMBL:BC063812 IPI:IPI00369618 RefSeq:NP_955404.1
UniGene:Rn.91523 SMR:Q6P3V8 STRING:Q6P3V8
Ensembl:ENSRNOT00000049048 GeneID:287436 KEGG:rno:287436
InParanoid:Q6P3V8 NextBio:626135 Genevestigator:Q6P3V8
Uniprot:Q6P3V8
Length = 406
Score = 900 (321.9 bits), Expect = 3.1e-90, P = 3.1e-90
Identities = 171/233 (73%), Positives = 207/233 (88%)
Query: 27 NGPPGMAVDGLIETNWDHVAENFDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGND 86
NGP GM +G+IE+NW+ + ++FDDM LSE LLRGIYAYGFEKPSAIQQRAI+PC++G D
Sbjct: 12 NGPDGMEPEGVIESNWNEIVDSFDDMNLSESLLRGIYAYGFEKPSAIQQRAILPCIKGYD 71
Query: 87 VIAQAQSGTGKTATFSISILQQVDQNIKECQALILAPTRELAQQIQKVVIALGDFMSVSC 146
VIAQAQSGTGKTATF+ISILQQ++ ++K QAL+LAPTRELAQQIQKVV+ALGD+M SC
Sbjct: 72 VIAQAQSGTGKTATFAISILQQIELDLKATQALVLAPTRELAQQIQKVVMALGDYMGASC 131
Query: 147 HACIGGTIVRDDIRKLEAGA-QVVVGTPGRVFDMISRGALSTKQIRMFVLDEADEMLSRG 205
HACIGGT VR +++KL+ A ++VGTPGRVFDM++R LS K I+MFVLDEADEMLSRG
Sbjct: 132 HACIGGTNVRAEVQKLQMEAPHIIVGTPGRVFDMLNRRYLSPKYIKMFVLDEADEMLSRG 191
Query: 206 FKDQIYDVFKHLNNDVQVILLSATMPADVLDVSMKFMRDPIKILVKKEELTLE 258
FKDQIYD+F+ LN++ QV+LLSATMP+DVL+V+ KFMRDPI+ILVKKEELTLE
Sbjct: 192 FKDQIYDIFQKLNSNTQVVLLSATMPSDVLEVTKKFMRDPIRILVKKEELTLE 244
>UNIPROTKB|Q8JFP1 [details] [associations]
symbol:EIF4A2 "Eukaryotic initiation factor 4A-II"
species:9031 "Gallus gallus" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003743 "translation initiation factor
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003743 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG107989 GeneTree:ENSGT00530000062880 HSSP:P60842
KO:K03257 OrthoDB:EOG4640C1 CTD:1974 OMA:TENDARQ EMBL:AF515726
EMBL:AJ720280 IPI:IPI00588868 RefSeq:NP_989880.1 UniGene:Gga.4580
ProteinModelPortal:Q8JFP1 SMR:Q8JFP1 STRING:Q8JFP1 PRIDE:Q8JFP1
Ensembl:ENSGALT00000014135 Ensembl:ENSGALT00000039726 GeneID:395232
KEGG:gga:395232 InParanoid:Q8JFP1 NextBio:20815321
ArrayExpress:Q8JFP1 Uniprot:Q8JFP1
Length = 407
Score = 896 (320.5 bits), Expect = 8.3e-90, P = 8.3e-90
Identities = 170/234 (72%), Positives = 208/234 (88%)
Query: 26 YNGPPGMAVDGLIETNWDHVAENFDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGN 85
+ GP GM DG+IE+NW+ + +NFDDM L E LLRGIYAYGFEKPSAIQQRAIIPC++G
Sbjct: 12 HGGPEGMEPDGVIESNWNEIVDNFDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGY 71
Query: 86 DVIAQAQSGTGKTATFSISILQQVDQNIKECQALILAPTRELAQQIQKVVIALGDFMSVS 145
DVIAQAQSGTGKTATF+ISILQQ++ ++KE QAL+LAPTRELAQQIQKV++ALGD+M +
Sbjct: 72 DVIAQAQSGTGKTATFAISILQQLEIDLKETQALVLAPTRELAQQIQKVILALGDYMGAT 131
Query: 146 CHACIGGTIVRDDIRKLEAGA-QVVVGTPGRVFDMISRGALSTKQIRMFVLDEADEMLSR 204
CHACIGGT VR++++KL+A A +VVGTPGRVFDM++R LS K I+MFVLDEADEMLSR
Sbjct: 132 CHACIGGTNVRNEMQKLQAEAPHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADEMLSR 191
Query: 205 GFKDQIYDVFKHLNNDVQVILLSATMPADVLDVSMKFMRDPIKILVKKEELTLE 258
GFKDQIY++F+ L+ ++QV+LLSATMP DVL+V+ KFMR+PI+ILVKKEELTLE
Sbjct: 192 GFKDQIYEIFQKLSTNIQVVLLSATMPMDVLEVTKKFMREPIRILVKKEELTLE 245
>ZFIN|ZDB-GENE-031030-2 [details] [associations]
symbol:eif4a1a "eukaryotic translation initiation
factor 4A, isoform 1A" species:7955 "Danio rerio" [GO:0004386
"helicase activity" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0003743 "translation
initiation factor activity" evidence=IEA] [GO:0006413
"translational initiation" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-031030-2 GO:GO:0005524 GO:GO:0003743
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG107989 HSSP:P10081 GeneTree:ENSGT00530000062880
KO:K03257 OMA:IKMFILD OrthoDB:EOG4640C1 EMBL:CR848032 EMBL:BC048899
IPI:IPI00502344 RefSeq:NP_938180.1 UniGene:Dr.75120 SMR:Q802C9
STRING:Q802C9 Ensembl:ENSDART00000058913 GeneID:386634
KEGG:dre:386634 CTD:386634 InParanoid:Q802C9 NextBio:20813962
Uniprot:Q802C9
Length = 406
Score = 896 (320.5 bits), Expect = 8.3e-90, P = 8.3e-90
Identities = 172/243 (70%), Positives = 208/243 (85%)
Query: 17 AENEAEQPAYNGPPGMAVDGLIETNWDHVAENFDDMELSEELLRGIYAYGFEKPSAIQQR 76
+E+E ++P NGP GM DG+IE+NW + ++FDDM L E LLRGIYAYGFEKPSAIQQR
Sbjct: 3 SEHE-DRPRDNGPEGMEPDGVIESNWKEIVDSFDDMNLREALLRGIYAYGFEKPSAIQQR 61
Query: 77 AIIPCVRGNDVIAQAQSGTGKTATFSISILQQVDQNIKECQALILAPTRELAQQIQKVVI 136
AI+PC++G DVIAQAQSGTGKTATF+ISILQQ+D +K QA++LAPTRELAQQIQKVV+
Sbjct: 62 AILPCIKGYDVIAQAQSGTGKTATFAISILQQIDVELKATQAMVLAPTRELAQQIQKVVL 121
Query: 137 ALGDFMSVSCHACIGGTIVRDDIRKLEAGA-QVVVGTPGRVFDMISRGALSTKQIRMFVL 195
ALGD+M +CHACIGGT VR+D++KL+A +VVGTPGRVFDM++R LS K I+MF L
Sbjct: 122 ALGDYMGATCHACIGGTNVRNDVQKLQADVPHIVVGTPGRVFDMLNRRYLSPKYIKMFAL 181
Query: 196 DEADEMLSRGFKDQIYDVFKHLNNDVQVILLSATMPADVLDVSMKFMRDPIKILVKKEEL 255
DEADEMLSRGFKDQIY++F+ L D QVILLSATMP +VL+V+ KFMRDP++ILVKKEEL
Sbjct: 182 DEADEMLSRGFKDQIYEIFQKLATDTQVILLSATMPQEVLEVTTKFMRDPVRILVKKEEL 241
Query: 256 TLE 258
TLE
Sbjct: 242 TLE 244
>FB|FBgn0001942 [details] [associations]
symbol:eIF-4a "Eukaryotic initiation factor 4a" species:7227
"Drosophila melanogaster" [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0006413 "translational initiation"
evidence=ISS;NAS] [GO:0016281 "eukaryotic translation initiation
factor 4F complex" evidence=ISS] [GO:0003743 "translation
initiation factor activity" evidence=ISS;NAS] [GO:0005829 "cytosol"
evidence=ISS;NAS] [GO:0017116 "single-stranded DNA-dependent
ATP-dependent DNA helicase activity" evidence=NAS] [GO:0006268 "DNA
unwinding involved in replication" evidence=NAS] [GO:0000339 "RNA
cap binding" evidence=NAS] [GO:0003729 "mRNA binding" evidence=NAS]
[GO:0007446 "imaginal disc growth" evidence=TAS] [GO:0002168
"instar larval development" evidence=TAS] [GO:0009950
"dorsal/ventral axis specification" evidence=IMP] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000381 "regulation of alternative mRNA
splicing, via spliceosome" evidence=IMP] [GO:0005634 "nucleus"
evidence=IC] [GO:0000022 "mitotic spindle elongation" evidence=IMP]
[GO:0007052 "mitotic spindle organization" evidence=IMP]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0007067 "mitosis" evidence=IMP] [GO:0006974 "response to DNA
damage stimulus" evidence=IMP] [GO:0048132 "female germ-line stem
cell division" evidence=IGI;IMP] [GO:0030718 "germ-line stem cell
maintenance" evidence=IMP] [GO:0048477 "oogenesis" evidence=IGI]
[GO:0072686 "mitotic spindle" evidence=IDA] [GO:0051297 "centrosome
organization" evidence=IMP] [GO:0005813 "centrosome" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0005813 GO:GO:0005875 GO:GO:0007067 EMBL:AE014134
GO:GO:0051297 GO:GO:0016281 GO:GO:0006974 GO:GO:0003743
GO:GO:0030718 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0000022 GO:GO:0072686 GO:GO:0048132 GO:GO:0002168
GO:GO:0008026 GO:GO:0000381 eggNOG:COG0513 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0007446
GeneTree:ENSGT00530000062880 KO:K03257 OMA:TENDARQ EMBL:X69045
EMBL:AF145621 EMBL:AY069283 EMBL:AY121623 PIR:S30278
RefSeq:NP_001245907.1 RefSeq:NP_476595.1 RefSeq:NP_723137.1
RefSeq:NP_723138.1 RefSeq:NP_723139.1 UniGene:Dm.7226
ProteinModelPortal:Q02748 SMR:Q02748 DIP:DIP-18113N IntAct:Q02748
MINT:MINT-892982 STRING:Q02748 PaxDb:Q02748 PRIDE:Q02748
EnsemblMetazoa:FBtr0079175 EnsemblMetazoa:FBtr0079176
EnsemblMetazoa:FBtr0079177 EnsemblMetazoa:FBtr0079178
EnsemblMetazoa:FBtr0307068 EnsemblMetazoa:FBtr0331201 GeneID:33835
KEGG:dme:Dmel_CG9075 CTD:33835 FlyBase:FBgn0001942
InParanoid:Q02748 OrthoDB:EOG4B8GVF PhylomeDB:Q02748 ChiTaRS:eIF-4a
GenomeRNAi:33835 NextBio:785508 Bgee:Q02748 GermOnline:CG9075
Uniprot:Q02748
Length = 403
Score = 887 (317.3 bits), Expect = 7.5e-89, P = 7.5e-89
Identities = 179/240 (74%), Positives = 201/240 (83%)
Query: 19 NEAEQPAYNGPPGMAVDGLIETNWDHVAENFDDMELSEELLRGIYAYGFEKPSAIQQRAI 78
NE Q +GP M +G+IE+ W V +NFDDM L EELLRGIY YGFEKPSAIQQRAI
Sbjct: 5 NEIPQ---DGPASMEPEGVIESTWHEVYDNFDDMNLREELLRGIYGYGFEKPSAIQQRAI 61
Query: 79 IPCVRGNDVIAQAQSGTGKTATFSISILQQVDQNIKECQALILAPTRELAQQIQKVVIAL 138
IPCVRG DVIAQAQSGTGKTATFSI+ILQQ+D +I+ECQALILAPTRELA QIQ+VV+AL
Sbjct: 62 IPCVRGRDVIAQAQSGTGKTATFSIAILQQIDTSIRECQALILAPTRELATQIQRVVMAL 121
Query: 139 GDFMSVSCHACIGGTIVRDDIRKLEAGAQVVVGTPGRVFDMISRGALSTKQIRMFVLDEA 198
G++M V HACIGGT VR+D R LE+G VVVGTPGRV+DMI+R L T+ I++FVLDEA
Sbjct: 122 GEYMKVHSHACIGGTNVREDARILESGCHVVVGTPGRVYDMINRKVLRTQYIKLFVLDEA 181
Query: 199 DEMLSRGFKDQIYDVFKHLNNDVQVILLSATMPADVLDVSMKFMRDPIKILVKKEELTLE 258
DEMLSRGFKDQI DVFK L DVQVILLSATMP DVL+VS FMRDP+ ILVKKEELTLE
Sbjct: 182 DEMLSRGFKDQIQDVFKMLPPDVQVILLSATMPPDVLEVSRCFMRDPVSILVKKEELTLE 241
>ZFIN|ZDB-GENE-040120-6 [details] [associations]
symbol:eif4a1b "eukaryotic translation initiation
factor 4A, isoform 1B" species:7955 "Danio rerio" [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003743 "translation initiation factor activity" evidence=IEA]
[GO:0006413 "translational initiation" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 ZFIN:ZDB-GENE-040120-6 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 HOVERGEN:HBG107989 OrthoDB:EOG4640C1 EMBL:BC153507
IPI:IPI00509685 UniGene:Dr.104803 ProteinModelPortal:A8E590
SMR:A8E590 STRING:A8E590 ArrayExpress:A8E590 Uniprot:A8E590
Length = 429
Score = 883 (315.9 bits), Expect = 2.0e-88, P = 2.0e-88
Identities = 169/252 (67%), Positives = 212/252 (84%)
Query: 8 NWEDPKNGPAENEAEQPAYNGPPGMAVDGLIETNWDHVAENFDDMELSEELLRGIYAYGF 67
N + K+ P ++E P + DG+IE+NWD + ++FDDM L E LLRGIYAYGF
Sbjct: 17 NGQTSKS-PPKDEKRGKHLRKSPRLQADGVIESNWDEIVDSFDDMNLRETLLRGIYAYGF 75
Query: 68 EKPSAIQQRAIIPCVRGNDVIAQAQSGTGKTATFSISILQQVDQNIKECQALILAPTREL 127
EKPSAIQQRAI+PC++G DVIAQAQSGTGKTATF+ISILQQ+D +K QAL+LAPTREL
Sbjct: 76 EKPSAIQQRAILPCIKGYDVIAQAQSGTGKTATFAISILQQIDIELKGTQALVLAPTREL 135
Query: 128 AQQIQKVVIALGDFMSVSCHACIGGTIVRDDIRKLEAGA-QVVVGTPGRVFDMISRGALS 186
AQQIQKV++ALGD+M +CHACIGGT VR++++KL+A A +VVGTPGRV+DM++R LS
Sbjct: 136 AQQIQKVILALGDYMGATCHACIGGTNVRNEVQKLQAEAPHIVVGTPGRVYDMLNRKFLS 195
Query: 187 TKQIRMFVLDEADEMLSRGFKDQIYDVFKHLNNDVQVILLSATMPADVLDVSMKFMRDPI 246
+K I+MFVLDEADEMLSRGFKDQIY++F+ L+ +QV+LLSATMPA+VLDV+ KFMR+P+
Sbjct: 196 SKYIKMFVLDEADEMLSRGFKDQIYEIFQKLSTSIQVVLLSATMPAEVLDVTTKFMREPV 255
Query: 247 KILVKKEELTLE 258
+ILVKKEELTLE
Sbjct: 256 RILVKKEELTLE 267
>UNIPROTKB|J3QS69 [details] [associations]
symbol:EIF4A1 "Eukaryotic initiation factor 4A-I"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR011545 Pfam:PF00270 PROSITE:PS00039
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
EMBL:AC016876 HGNC:HGNC:3282 ChiTaRS:EIF4A1 Ensembl:ENST00000578495
Uniprot:J3QS69
Length = 300
Score = 880 (314.8 bits), Expect = 4.1e-88, P = 4.1e-88
Identities = 169/233 (72%), Positives = 205/233 (87%)
Query: 27 NGPPGMAVDGLIETNWDHVAENFDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGND 86
NGP GM +G+IE+NW+ + ++FDDM LSE LLRGIYAYGFEKPSAIQQRAI+PC++G D
Sbjct: 12 NGPDGMEPEGVIESNWNEIVDSFDDMNLSESLLRGIYAYGFEKPSAIQQRAILPCIKGYD 71
Query: 87 VIAQAQSGTGKTATFSISILQQVDQNIKECQALILAPTRELAQQIQKVVIALGDFMSVSC 146
VIAQAQSGTGKTATF+ISILQQ++ ++K QAL+LAPTRELAQQ KVV+ALGD+M SC
Sbjct: 72 VIAQAQSGTGKTATFAISILQQIELDLKATQALVLAPTRELAQQ--KVVMALGDYMGASC 129
Query: 147 HACIGGTIVRDDIRKLEAGA-QVVVGTPGRVFDMISRGALSTKQIRMFVLDEADEMLSRG 205
HACIGGT VR +++KL+ A ++VGTPGRVFDM++R LS K I+MFVLDEADEMLSRG
Sbjct: 130 HACIGGTNVRAEVQKLQMEAPHIIVGTPGRVFDMLNRRYLSPKYIKMFVLDEADEMLSRG 189
Query: 206 FKDQIYDVFKHLNNDVQVILLSATMPADVLDVSMKFMRDPIKILVKKEELTLE 258
FKDQIYD+F+ LN++ QV+LLSATMP+DVL+V+ KFMRDPI+ILVKKEELTLE
Sbjct: 190 FKDQIYDIFQKLNSNTQVVLLSATMPSDVLEVTKKFMRDPIRILVKKEELTLE 242
>UNIPROTKB|J3KTB5 [details] [associations]
symbol:EIF4A1 "Eukaryotic initiation factor 4A-I"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR011545 Pfam:PF00270 PROSITE:PS00039
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
EMBL:AC016876 HGNC:HGNC:3282 ChiTaRS:EIF4A1 Ensembl:ENST00000584860
Uniprot:J3KTB5
Length = 257
Score = 876 (313.4 bits), Expect = 1.1e-87, P = 1.1e-87
Identities = 167/228 (73%), Positives = 203/228 (89%)
Query: 32 MAVDGLIETNWDHVAENFDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGNDVIAQA 91
M +G+IE+NW+ + ++FDDM LSE LLRGIYAYGFEKPSAIQQRAI+PC++G DVIAQA
Sbjct: 1 MEPEGVIESNWNEIVDSFDDMNLSESLLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQA 60
Query: 92 QSGTGKTATFSISILQQVDQNIKECQALILAPTRELAQQIQKVVIALGDFMSVSCHACIG 151
QSGTGKTATF+ISILQQ++ ++K QAL+LAPTRELAQQIQKVV+ALGD+M SCHACIG
Sbjct: 61 QSGTGKTATFAISILQQIELDLKATQALVLAPTRELAQQIQKVVMALGDYMGASCHACIG 120
Query: 152 GTIVRDDIRKLEAGA-QVVVGTPGRVFDMISRGALSTKQIRMFVLDEADEMLSRGFKDQI 210
GT VR +++KL+ A ++VGTPGRVFDM++R LS K I+MFVLDEADEMLSRGFKDQI
Sbjct: 121 GTNVRAEVQKLQMEAPHIIVGTPGRVFDMLNRRYLSPKYIKMFVLDEADEMLSRGFKDQI 180
Query: 211 YDVFKHLNNDVQVILLSATMPADVLDVSMKFMRDPIKILVKKEELTLE 258
YD+F+ LN++ QV+LLSATMP+DVL+V+ KFMRDPI+ILVKKEELTLE
Sbjct: 181 YDIFQKLNSNTQVVLLSATMPSDVLEVTKKFMRDPIRILVKKEELTLE 228
>ASPGD|ASPL0000037981 [details] [associations]
symbol:AN2932 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005829 "cytosol"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 EMBL:BN001306 EMBL:AACD01000051 GO:GO:0003743
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 KO:K03257 OMA:TENDARQ RefSeq:XP_660536.1
PRIDE:Q5B948 GeneID:2874390 KEGG:ani:AN2932.2 OrthoDB:EOG4PG98F
Uniprot:Q5B948
Length = 398
Score = 855 (306.0 bits), Expect = 1.8e-85, P = 1.8e-85
Identities = 161/224 (71%), Positives = 192/224 (85%)
Query: 35 DGLIETNWDHVAENFDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGNDVIAQAQSG 94
D IE+N+D + ++FD MEL ELLRG+YAYGFE+PSAIQQRAI+P V+GNDVIAQAQSG
Sbjct: 13 DSQIESNYDEITDSFDSMELKPELLRGVYAYGFERPSAIQQRAILPIVKGNDVIAQAQSG 72
Query: 95 TGKTATFSISILQQVDQNIKECQALILAPTRELAQQIQKVVIALGDFMSVSCHACIGGTI 154
TGKTATFSIS LQ++D N+K CQALI+APTRELAQQIQKVVIA+GDFM++ CHACIGGT
Sbjct: 73 TGKTATFSISALQKLDPNVKACQALIVAPTRELAQQIQKVVIAIGDFMNIQCHACIGGTA 132
Query: 155 VRDDIRKLEAGAQVVVGTPGRVFDMISRGALSTKQIRMFVLDEADEMLSRGFKDQIYDVF 214
VRDD+ L G Q+VVGTPGR+ DMI R L T Q++MF+LDEADEMLSRGF +QIYD+F
Sbjct: 133 VRDDMNALREGPQIVVGTPGRIHDMIQRRVLKTDQMKMFILDEADEMLSRGFTEQIYDIF 192
Query: 215 KHLNNDVQVILLSATMPADVLDVSMKFMRDPIKILVKKEELTLE 258
+ L QV+LLSATMP DVL+V+ KFMRDP++ILVKK+ELTLE
Sbjct: 193 QLLPQSTQVVLLSATMPQDVLEVTTKFMRDPVRILVKKQELTLE 236
>POMBASE|SPAC1006.07 [details] [associations]
symbol:SPAC1006.07 "translation initiation factor eIF4A
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0002183
"cytoplasmic translational initiation" evidence=NAS] [GO:0003743
"translation initiation factor activity" evidence=ISO] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISO] [GO:0005524
"ATP binding" evidence=IC] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006413 "translational initiation" evidence=ISO] [GO:0016281
"eukaryotic translation initiation factor 4F complex" evidence=ISO]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 PomBase:SPAC1006.07 GO:GO:0005829 GO:GO:0005524
EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0016281 GO:GO:0003743
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0002183 KO:K03257 OrthoDB:EOG4PG98F
EMBL:X80796 EMBL:L40627 PIR:S71745 RefSeq:NP_594854.1
ProteinModelPortal:P47943 SMR:P47943 STRING:P47943 PRIDE:P47943
EnsemblFungi:SPAC1006.07.1 GeneID:2542948 KEGG:spo:SPAC1006.07
OMA:PILEMED NextBio:20803983 Uniprot:P47943
Length = 392
Score = 855 (306.0 bits), Expect = 1.8e-85, P = 1.8e-85
Identities = 166/224 (74%), Positives = 193/224 (86%)
Query: 35 DGLIETNWDHVAENFDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGNDVIAQAQSG 94
D +IETN+D V + FDDM L ELLRGIYAYGFE+PSAIQQRAI+P + DV+AQAQSG
Sbjct: 7 DSVIETNYDEVIDTFDDMNLKPELLRGIYAYGFERPSAIQQRAIMPILGERDVLAQAQSG 66
Query: 95 TGKTATFSISILQQVDQNIKECQALILAPTRELAQQIQKVVIALGDFMSVSCHACIGGTI 154
TGKTATFSIS+LQ++D ++K+CQALILAPTRELAQQIQKVV+ALGD M+V CHACIGGT+
Sbjct: 67 TGKTATFSISVLQKIDTSLKQCQALILAPTRELAQQIQKVVVALGDLMNVECHACIGGTL 126
Query: 155 VRDDIRKLEAGAQVVVGTPGRVFDMISRGALSTKQIRMFVLDEADEMLSRGFKDQIYDVF 214
VRDD+ L+AG VVVGTPGRV DMI R AL T ++MFVLDEADEMLSRGFKDQIYD+F
Sbjct: 127 VRDDMAALQAGVHVVVGTPGRVHDMIQRRALPTDAVQMFVLDEADEMLSRGFKDQIYDIF 186
Query: 215 KHLNNDVQVILLSATMPADVLDVSMKFMRDPIKILVKKEELTLE 258
+ L QV+LLSATMP DVL+V+ KFMRDPI+ILVKK+ELTLE
Sbjct: 187 QLLPPTAQVVLLSATMPQDVLEVTTKFMRDPIRILVKKDELTLE 230
>UNIPROTKB|A4QVP2 [details] [associations]
symbol:TIF1 "ATP-dependent RNA helicase eIF4A"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0043581 "mycelium
development" evidence=IEP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0003743 EMBL:CM001231 GO:GO:0043581 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 KO:K03257 OrthoDB:EOG4PG98F
RefSeq:XP_003711015.1 ProteinModelPortal:A4QVP2 SMR:A4QVP2
EnsemblFungi:MGG_04400T0 GeneID:2677872 KEGG:mgr:MGG_04400
Uniprot:A4QVP2
Length = 396
Score = 853 (305.3 bits), Expect = 3.0e-85, P = 3.0e-85
Identities = 161/224 (71%), Positives = 195/224 (87%)
Query: 35 DGLIETNWDHVAENFDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGNDVIAQAQSG 94
+G IE+N+D ++FD+M L ELLRGIYAYGFE+PSAIQQRAI+P ++G+DVIAQAQSG
Sbjct: 11 EGQIESNYDETVDSFDEMNLKSELLRGIYAYGFERPSAIQQRAIMPVIKGHDVIAQAQSG 70
Query: 95 TGKTATFSISILQQVDQNIKECQALILAPTRELAQQIQKVVIALGDFMSVSCHACIGGTI 154
TGKTATFSIS+LQ++D N+K+CQALILAPTRELAQQIQKVV+A+GDFM++ CHACIGGT
Sbjct: 71 TGKTATFSISVLQKIDTNVKQCQALILAPTRELAQQIQKVVVAIGDFMNIECHACIGGTS 130
Query: 155 VRDDIRKLEAGAQVVVGTPGRVFDMISRGALSTKQIRMFVLDEADEMLSRGFKDQIYDVF 214
VRDD++ L+ G QVVVGTPGRV DMI R L T ++MFVLDEADEMLSRGF +QIYD+F
Sbjct: 131 VRDDMKALQDGPQVVVGTPGRVHDMIQRRFLKTDGMKMFVLDEADEMLSRGFTEQIYDIF 190
Query: 215 KHLNNDVQVILLSATMPADVLDVSMKFMRDPIKILVKKEELTLE 258
+ L QV+LLSATMP DVL+V+ KFMRDP++ILVKK+ELTLE
Sbjct: 191 QLLPQSTQVVLLSATMPQDVLEVTTKFMRDPVRILVKKDELTLE 234
>WB|WBGene00002083 [details] [associations]
symbol:inf-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0019915 "lipid storage" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0008340 GO:GO:0009792
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0040011
GO:GO:0000003 GO:GO:0019915 GO:GO:0003743 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:FO081266 GO:GO:0008026
eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00530000062880 KO:K03257 OMA:TENDARQ
EMBL:Z12116 PIR:S26281 RefSeq:NP_001022623.1 RefSeq:NP_001022624.1
UniGene:Cel.6803 ProteinModelPortal:P27639 SMR:P27639
DIP:DIP-27102N IntAct:P27639 MINT:MINT-1112147 STRING:P27639
PaxDb:P27639 PRIDE:P27639 EnsemblMetazoa:F57B9.6a.1
EnsemblMetazoa:F57B9.6a.2 GeneID:175966 KEGG:cel:CELE_F57B9.6
UCSC:F57B9.6a.1 CTD:175966 WormBase:F57B9.6a WormBase:F57B9.6b
InParanoid:P27639 NextBio:890522 Uniprot:P27639
Length = 402
Score = 840 (300.8 bits), Expect = 7.2e-84, P = 7.2e-84
Identities = 164/224 (73%), Positives = 194/224 (86%)
Query: 35 DGLIETNWDHVAENFDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGNDVIAQAQSG 94
DGLIE N+D V E+FDDMEL EELLRGIY +GFEKPSAIQ+RAI+PC G DVIAQAQSG
Sbjct: 17 DGLIEGNYDQVVESFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSG 76
Query: 95 TGKTATFSISILQQVDQNIKECQALILAPTRELAQQIQKVVIALGDFMSVSCHACIGGTI 154
TGKTATFS+SILQ++D QAL++APTRELAQQIQKV+ ALG++++V+ CIGGT
Sbjct: 77 TGKTATFSVSILQRIDHEDPHVQALVMAPTRELAQQIQKVMSALGEYLNVNILPCIGGTS 136
Query: 155 VRDDIRKLEAGAQVVVGTPGRVFDMISRGALSTKQIRMFVLDEADEMLSRGFKDQIYDVF 214
VRDD RKLEAG VVVGTPGRV DMI+R AL T +I+MFVLDEADEMLSRGFKDQIY+VF
Sbjct: 137 VRDDQRKLEAGIHVVVGTPGRVGDMINRNALDTSRIKMFVLDEADEMLSRGFKDQIYEVF 196
Query: 215 KHLNNDVQVILLSATMPADVLDVSMKFMRDPIKILVKKEELTLE 258
+ + DVQV+LLSATMP++VLDV+ +FMR+PI+ILVKK+ELTLE
Sbjct: 197 RSMPQDVQVVLLSATMPSEVLDVTNRFMRNPIRILVKKDELTLE 240
>UNIPROTKB|I3LLD5 [details] [associations]
symbol:I3LLD5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00530000062880 Ensembl:ENSSSCT00000032168 OMA:SKRERIM
Uniprot:I3LLD5
Length = 401
Score = 836 (299.3 bits), Expect = 1.9e-83, P = 1.9e-83
Identities = 159/226 (70%), Positives = 196/226 (86%)
Query: 29 PPGMAVDGLIETNWDHVAENFDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGNDVI 88
P G +G+IE+NW+ + ++FDDM LSE LLRGIYAYGFEKPSAIQQRAI+PC++G DVI
Sbjct: 14 PGGERPEGVIESNWNEIVDSFDDMNLSESLLRGIYAYGFEKPSAIQQRAILPCIKGYDVI 73
Query: 89 AQAQSGTGKTATFSISILQQVDQNIKECQALILAPTRELAQQIQKVVIALGDFMSVSCHA 148
AQAQSGTGKTATF+ISILQQ++ ++K QAL+LAPTRELAQQIQKVV+ALGD+M SCHA
Sbjct: 74 AQAQSGTGKTATFAISILQQIELDLKATQALVLAPTRELAQQIQKVVMALGDYMGASCHA 133
Query: 149 CIGGTIVRDDIRKLEAGA-QVVVGTPGRVFDMISRGALSTKQIRMFVLDEADEMLSRGFK 207
CIGGT VR +++KL+ A ++VGTPGRVFDM++R LS K I+MFVLDEADEMLSRGFK
Sbjct: 134 CIGGTNVRAEVQKLQMEAPHIIVGTPGRVFDMLNRRYLSPKYIKMFVLDEADEMLSRGFK 193
Query: 208 DQIYDVFKHLNNDVQVILLSATMPADVLDVSMKFMRDPIKILVKKE 253
DQIYD+F+ LN++ QV+LLSATMP+DVL+V+ KFMRDPI+I + E
Sbjct: 194 DQIYDIFQKLNSNTQVVLLSATMPSDVLEVTKKFMRDPIRIXLTLE 239
>UNIPROTKB|J3QL43 [details] [associations]
symbol:EIF4A1 "Eukaryotic initiation factor 4A-I"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR011545 Pfam:PF00270 PROSITE:PS00039
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
EMBL:AC016876 HGNC:HGNC:3282 ChiTaRS:EIF4A1 Ensembl:ENST00000584784
Uniprot:J3QL43
Length = 271
Score = 749 (268.7 bits), Expect = 3.1e-74, P = 3.1e-74
Identities = 141/197 (71%), Positives = 172/197 (87%)
Query: 27 NGPPGMAVDGLIETNWDHVAENFDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGND 86
NGP GM +G+IE+NW+ + ++FDDM LSE LLRGIYAYGFEKPSAIQQRAI+PC++G D
Sbjct: 12 NGPDGMEPEGVIESNWNEIVDSFDDMNLSESLLRGIYAYGFEKPSAIQQRAILPCIKGYD 71
Query: 87 VIAQAQSGTGKTATFSISILQQVDQNIKECQALILAPTRELAQQIQKVVIALGDFMSVSC 146
VIAQAQSGTGKTATF+ISILQQ++ ++K QAL+LAPTRELAQQIQKVV+ALGD+M SC
Sbjct: 72 VIAQAQSGTGKTATFAISILQQIELDLKATQALVLAPTRELAQQIQKVVMALGDYMGASC 131
Query: 147 HACIGGTIVRDDIRKLEAGA-QVVVGTPGRVFDMISRGALSTKQIRMFVLDEADEMLSRG 205
HACIGGT VR +++KL+ A ++VGTPGRVFDM++R LS K I+MFVLDEADEMLSRG
Sbjct: 132 HACIGGTNVRAEVQKLQMEAPHIIVGTPGRVFDMLNRRYLSPKYIKMFVLDEADEMLSRG 191
Query: 206 FKDQIYDVFKHLNNDVQ 222
FKDQIYD+F+ LN++ Q
Sbjct: 192 FKDQIYDIFQKLNSNTQ 208
>FB|FBgn0037573 [details] [associations]
symbol:eIF4AIII "eIF4AIII" species:7227 "Drosophila
melanogaster" [GO:0016281 "eukaryotic translation initiation factor
4F complex" evidence=ISS] [GO:0003743 "translation initiation
factor activity" evidence=ISS] [GO:0006413 "translational
initiation" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0045495 "pole plasm" evidence=IDA] [GO:0045451 "pole plasm
oskar mRNA localization" evidence=IGI] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0071011 "precatalytic spliceosome" evidence=IDA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC] [GO:0006974 "response to
DNA damage stimulus" evidence=IMP] [GO:0008380 "RNA splicing"
evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0016281
GO:GO:0006974 GO:GO:0003743 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 GO:GO:0045451 GO:GO:0045495 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 ChiTaRS:EIF4A3
EMBL:AY089635 ProteinModelPortal:Q8SXH3 SMR:Q8SXH3 IntAct:Q8SXH3
STRING:Q8SXH3 PaxDb:Q8SXH3 PRIDE:Q8SXH3 FlyBase:FBgn0037573
InParanoid:Q8SXH3 OrthoDB:EOG4XWDD6 Bgee:Q8SXH3 Uniprot:Q8SXH3
Length = 399
Score = 746 (267.7 bits), Expect = 6.5e-74, P = 6.5e-74
Identities = 146/221 (66%), Positives = 180/221 (81%)
Query: 39 ETNWD-HVAENFDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGNDVIAQAQSGTGK 97
ET+ D V F+ M L EELLRGIYAYGFEKPSAIQQR+I P V+G DVIAQAQSGTGK
Sbjct: 17 ETSEDVEVIPTFNAMNLKEELLRGIYAYGFEKPSAIQQRSITPIVKGRDVIAQAQSGTGK 76
Query: 98 TATFSISILQQVDQNIKECQALILAPTRELAQQIQKVVIALGDFMSVSCHACIGGTIVRD 157
TATFSISILQ +D ++E Q L L+PTRELA QIQKV++ALGD M+V CH CIGGT + +
Sbjct: 77 TATFSISILQSLDTTLRETQVLCLSPTRELAVQIQKVILALGDMMNVQCHVCIGGTNLGE 136
Query: 158 DIRKLEAGAQVVVGTPGRVFDMISRGALSTKQIRMFVLDEADEMLSRGFKDQIYDVFKHL 217
DIRKL+ G +V GTPGRVFDMI R L T+ I+M VLDEADEML++GFK+QIYDV+++L
Sbjct: 137 DIRKLDYGQHIVSGTPGRVFDMIKRRVLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYL 196
Query: 218 NNDVQVILLSATMPADVLDVSMKFMRDPIKILVKKEELTLE 258
QV+L+SAT+P ++L+++ KFM DPI+ILVK++ELTLE
Sbjct: 197 PPATQVVLISATLPHEILEMTSKFMTDPIRILVKRDELTLE 237
>DICTYBASE|DDB_G0269146 [details] [associations]
symbol:ifdA "eukaryotic translation initiation factor
4A" species:44689 "Dictyostelium discoideum" [GO:0045335
"phagocytic vesicle" evidence=IDA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 dictyBase:DDB_G0269146
GO:GO:0005524 EMBL:AAFI02000005 GenomeReviews:CM000150_GR
GO:GO:0045335 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HSSP:P10081 KO:K03257 OMA:AVINYHI EMBL:U78759
RefSeq:XP_645917.1 ProteinModelPortal:P90529 STRING:P90529
PRIDE:P90529 EnsemblProtists:DDB0191262 GeneID:8616858
KEGG:ddi:DDB_G0269146 InParanoid:P90529 Uniprot:P90529
Length = 395
Score = 743 (266.6 bits), Expect = 1.4e-73, P = 1.4e-73
Identities = 139/220 (63%), Positives = 184/220 (83%)
Query: 39 ETNWDHVAENFDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGNDVIAQAQSGTGKT 98
E+ +D + ++FD+MEL ++LLRGIY+YGFEKPSAIQQRAIIP +G D+IAQAQSGTGKT
Sbjct: 16 ESTYDKIVDSFDNMELPKDLLRGIYSYGFEKPSAIQQRAIIPLSKGFDIIAQAQSGTGKT 75
Query: 99 ATFSISILQQVDQNIKECQALILAPTRELAQQIQKVVIALGDFMSVSCHACIGGTIVRDD 158
ATF++ IL ++D ++ +CQALI+APTRELAQQIQKVV+ALG+++ + +ACIGGT + DD
Sbjct: 76 ATFTVGILSRIDISVLKCQALIIAPTRELAQQIQKVVLALGEYLHIKSYACIGGTKITDD 135
Query: 159 IRKLEAGAQVVVGTPGRVFDMISRGALSTKQIRMFVLDEADEMLSRGFKDQIYDVFKHLN 218
I+ L++G VVVGTPGRVF+M+SRG ++ IR+F LDEADEMLSRGFKDQIY++F+ L
Sbjct: 136 IQALQSGVHVVVGTPGRVFEMLSRGIINRDTIRIFCLDEADEMLSRGFKDQIYEIFRFLP 195
Query: 219 NDVQVILLSATMPADVLDVSMKFMRDPIKILVKKEELTLE 258
+QV L SATM + L ++ KFM++P+ ILVKK+ELTLE
Sbjct: 196 KTIQVGLFSATMTDETLGITSKFMQNPVSILVKKDELTLE 235
>GENEDB_PFALCIPARUM|PF14_0655 [details] [associations]
symbol:PF14_0655 "RNA helicase-1, putative"
species:5833 "Plasmodium falciparum" [GO:0003729 "mRNA binding"
evidence=ISS] [GO:0003743 "translation initiation factor activity"
evidence=ISS] [GO:0000339 "RNA cap binding" evidence=ISS]
[GO:0006446 "regulation of translational initiation" evidence=ISS]
[GO:0016281 "eukaryotic translation initiation factor 4F complex"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0006446
GO:GO:0003676 EMBL:AE014187 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
GenomeReviews:AE014187_GR KO:K03257 OMA:TENDARQ
RefSeq:XP_001348829.1 ProteinModelPortal:Q8IKF0 SMR:Q8IKF0
IntAct:Q8IKF0 MINT:MINT-1575859 EnsemblProtists:PF14_0655:mRNA
GeneID:812237 KEGG:pfa:PF14_0655 EuPathDB:PlasmoDB:PF3D7_1468700
ProtClustDB:PTZ00424 Uniprot:Q8IKF0
Length = 398
Score = 742 (266.3 bits), Expect = 1.7e-73, P = 1.7e-73
Identities = 143/221 (64%), Positives = 178/221 (80%)
Query: 38 IETNWDHVAENFDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGNDVIAQAQSGTGK 97
IE N + + + FD + L+E+LLRGIY+YGFEKPSAIQQR I P + G D I QAQSGTGK
Sbjct: 14 IEGNTEEIVDTFDALGLNEKLLRGIYSYGFEKPSAIQQRGIKPILNGYDTIGQAQSGTGK 73
Query: 98 TATFSISILQQVDQNIKECQALILAPTRELAQQIQKVVIALGDFMSVSCHACIGGTIVRD 157
TATF IS LQ ++ + CQALILAPTRELAQQIQKVV+ALGD++ V CHAC+GGT+VR+
Sbjct: 74 TATFVISSLQLINYDYVACQALILAPTRELAQQIQKVVLALGDYLKVKCHACVGGTVVRE 133
Query: 158 DIRKLEAGAQVVVGTPGRVFDMISRGALSTKQIRMFVLDEADEMLSRGFKDQIYDVFKHL 217
DI KL+ G +VVGTPGRV+DMI + L ++++F+LDEADEMLSRGFK QIY+VFK L
Sbjct: 134 DIDKLKQGVHMVVGTPGRVYDMIDKRHLGVDRLKLFILDEADEMLSRGFKAQIYEVFKKL 193
Query: 218 NNDVQVILLSATMPADVLDVSMKFMRDPIKILVKKEELTLE 258
D+QV L SATMP ++L+++ +FMRDP ILVKK+ELTLE
Sbjct: 194 VPDIQVALFSATMPQEILELTTRFMRDPKTILVKKDELTLE 234
>UNIPROTKB|Q8IKF0 [details] [associations]
symbol:H45 "Helicase 45" species:36329 "Plasmodium
falciparum 3D7" [GO:0006446 "regulation of translational
initiation" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0006446
GO:GO:0003676 EMBL:AE014187 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
GenomeReviews:AE014187_GR KO:K03257 OMA:TENDARQ
RefSeq:XP_001348829.1 ProteinModelPortal:Q8IKF0 SMR:Q8IKF0
IntAct:Q8IKF0 MINT:MINT-1575859 EnsemblProtists:PF14_0655:mRNA
GeneID:812237 KEGG:pfa:PF14_0655 EuPathDB:PlasmoDB:PF3D7_1468700
ProtClustDB:PTZ00424 Uniprot:Q8IKF0
Length = 398
Score = 742 (266.3 bits), Expect = 1.7e-73, P = 1.7e-73
Identities = 143/221 (64%), Positives = 178/221 (80%)
Query: 38 IETNWDHVAENFDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGNDVIAQAQSGTGK 97
IE N + + + FD + L+E+LLRGIY+YGFEKPSAIQQR I P + G D I QAQSGTGK
Sbjct: 14 IEGNTEEIVDTFDALGLNEKLLRGIYSYGFEKPSAIQQRGIKPILNGYDTIGQAQSGTGK 73
Query: 98 TATFSISILQQVDQNIKECQALILAPTRELAQQIQKVVIALGDFMSVSCHACIGGTIVRD 157
TATF IS LQ ++ + CQALILAPTRELAQQIQKVV+ALGD++ V CHAC+GGT+VR+
Sbjct: 74 TATFVISSLQLINYDYVACQALILAPTRELAQQIQKVVLALGDYLKVKCHACVGGTVVRE 133
Query: 158 DIRKLEAGAQVVVGTPGRVFDMISRGALSTKQIRMFVLDEADEMLSRGFKDQIYDVFKHL 217
DI KL+ G +VVGTPGRV+DMI + L ++++F+LDEADEMLSRGFK QIY+VFK L
Sbjct: 134 DIDKLKQGVHMVVGTPGRVYDMIDKRHLGVDRLKLFILDEADEMLSRGFKAQIYEVFKKL 193
Query: 218 NNDVQVILLSATMPADVLDVSMKFMRDPIKILVKKEELTLE 258
D+QV L SATMP ++L+++ +FMRDP ILVKK+ELTLE
Sbjct: 194 VPDIQVALFSATMPQEILELTTRFMRDPKTILVKKDELTLE 234
>UNIPROTKB|Q5ZM36 [details] [associations]
symbol:EIF4A3 "Eukaryotic initiation factor 4A-III"
species:9031 "Gallus gallus" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0000184 "nuclear-transcribed mRNA
catabolic process, nonsense-mediated decay" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0006417 "regulation of translation" evidence=IEA] [GO:0008380
"RNA splicing" evidence=IEA] [GO:0051028 "mRNA transport"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0016607
"nuclear speck" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0006417 GO:GO:0000184 GO:GO:0008380 GO:GO:0016607
GO:GO:0006397 GO:GO:0003723 GO:GO:0051028 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 KO:K13025 CTD:9775
OrthoDB:EOG4229JV EMBL:AJ719548 IPI:IPI00588271
RefSeq:NP_001025820.1 UniGene:Gga.7844 ProteinModelPortal:Q5ZM36
SMR:Q5ZM36 PRIDE:Q5ZM36 GeneID:416704 KEGG:gga:416704
InParanoid:Q5ZM36 NextBio:20820126 Uniprot:Q5ZM36
Length = 412
Score = 741 (265.9 bits), Expect = 2.2e-73, P = 2.2e-73
Identities = 145/214 (67%), Positives = 179/214 (83%)
Query: 45 VAENFDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGNDVIAQAQSGTGKTATFSIS 104
V FD M L E+LLRGIYAYGFEKPSAIQQRAI ++G DVIAQ+QSGTGKTATFSIS
Sbjct: 37 VTPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSIS 96
Query: 105 ILQQVDQNIKECQALILAPTRELAQQIQKVVIALGDFMSVSCHACIGGTIVRDDIRKLEA 164
+LQ +D ++E QALILAPTRELA QIQK ++ALGD+M+V CHACIGGT V +DIRKL+
Sbjct: 97 VLQCLDIQVRETQALILAPTRELAVQIQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDY 156
Query: 165 GAQVVVGTPGRVFDMISRGALSTKQIRMFVLDEADEMLSRGFKDQIYDVFKHLNNDVQVI 224
G VV GTPGRVFDMI R +L T+ I+M VLDEADEML++GFK+QIYDV+++L QV+
Sbjct: 157 GQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVV 216
Query: 225 LLSATMPADVLDVSMKFMRDPIKILVKKEELTLE 258
L+SAT+P ++L+++ KFM DPI+ILVK++ELTLE
Sbjct: 217 LISATLPHEILEMTNKFMTDPIRILVKRDELTLE 250
>UNIPROTKB|Q2NL22 [details] [associations]
symbol:EIF4A3 "Eukaryotic initiation factor 4A-III"
species:9913 "Bos taurus" [GO:0016607 "nuclear speck" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0048026 "positive regulation of mRNA
splicing, via spliceosome" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0045727 "positive regulation of translation"
evidence=IEA] [GO:0035145 "exon-exon junction complex"
evidence=IEA] [GO:0017148 "negative regulation of translation"
evidence=IEA] [GO:0008143 "poly(A) RNA binding" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IEA]
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IEA] [GO:0051028 "mRNA transport"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0006397
"mRNA processing" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005737 GO:GO:0000184
GO:GO:0008380 GO:GO:0017148 GO:GO:0016607 GO:GO:0006397
GO:GO:0045727 GO:GO:0051028 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0004004
GO:GO:0035145 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0008143 HOVERGEN:HBG107989
GeneTree:ENSGT00530000062880 KO:K13025 EMBL:BC111184
IPI:IPI00708766 RefSeq:NP_001039653.1 UniGene:Bt.3377
ProteinModelPortal:Q2NL22 SMR:Q2NL22 PRIDE:Q2NL22
Ensembl:ENSBTAT00000021327 GeneID:515145 KEGG:bta:515145 CTD:9775
InParanoid:Q2NL22 OMA:LALGDFM OrthoDB:EOG4229JV NextBio:20871682
Uniprot:Q2NL22
Length = 411
Score = 741 (265.9 bits), Expect = 2.2e-73, P = 2.2e-73
Identities = 145/214 (67%), Positives = 179/214 (83%)
Query: 45 VAENFDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGNDVIAQAQSGTGKTATFSIS 104
V FD M L E+LLRGIYAYGFEKPSAIQQRAI ++G DVIAQ+QSGTGKTATFSIS
Sbjct: 36 VTPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSIS 95
Query: 105 ILQQVDQNIKECQALILAPTRELAQQIQKVVIALGDFMSVSCHACIGGTIVRDDIRKLEA 164
+LQ +D ++E QALILAPTRELA QIQK ++ALGD+M+V CHACIGGT V +DIRKL+
Sbjct: 96 VLQCLDIQVRETQALILAPTRELAVQIQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDY 155
Query: 165 GAQVVVGTPGRVFDMISRGALSTKQIRMFVLDEADEMLSRGFKDQIYDVFKHLNNDVQVI 224
G VV GTPGRVFDMI R +L T+ I+M VLDEADEML++GFK+QIYDV+++L QV+
Sbjct: 156 GQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVV 215
Query: 225 LLSATMPADVLDVSMKFMRDPIKILVKKEELTLE 258
L+SAT+P ++L+++ KFM DPI+ILVK++ELTLE
Sbjct: 216 LISATLPHEILEMTNKFMTDPIRILVKRDELTLE 249
>UNIPROTKB|E2RDZ4 [details] [associations]
symbol:EIF4A3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0048026 "positive regulation of mRNA splicing,
via spliceosome" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045727 "positive regulation of translation" evidence=IEA]
[GO:0035145 "exon-exon junction complex" evidence=IEA] [GO:0017148
"negative regulation of translation" evidence=IEA] [GO:0008143
"poly(A) RNA binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IEA] [GO:0000184 "nuclear-transcribed mRNA catabolic
process, nonsense-mediated decay" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0000184 GO:GO:0017148 GO:GO:0045727 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
GO:GO:0035145 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0008143
GeneTree:ENSGT00530000062880 KO:K13025 OMA:EDWKFDT CTD:9775
EMBL:AAEX03006203 RefSeq:XP_533130.2 Ensembl:ENSCAFT00000009055
GeneID:475922 KEGG:cfa:475922 NextBio:20851666 Uniprot:E2RDZ4
Length = 411
Score = 741 (265.9 bits), Expect = 2.2e-73, P = 2.2e-73
Identities = 145/214 (67%), Positives = 179/214 (83%)
Query: 45 VAENFDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGNDVIAQAQSGTGKTATFSIS 104
V FD M L E+LLRGIYAYGFEKPSAIQQRAI ++G DVIAQ+QSGTGKTATFSIS
Sbjct: 36 VTPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSIS 95
Query: 105 ILQQVDQNIKECQALILAPTRELAQQIQKVVIALGDFMSVSCHACIGGTIVRDDIRKLEA 164
+LQ +D ++E QALILAPTRELA QIQK ++ALGD+M+V CHACIGGT V +DIRKL+
Sbjct: 96 VLQCLDIQVRETQALILAPTRELAVQIQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDY 155
Query: 165 GAQVVVGTPGRVFDMISRGALSTKQIRMFVLDEADEMLSRGFKDQIYDVFKHLNNDVQVI 224
G VV GTPGRVFDMI R +L T+ I+M VLDEADEML++GFK+QIYDV+++L QV+
Sbjct: 156 GQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVV 215
Query: 225 LLSATMPADVLDVSMKFMRDPIKILVKKEELTLE 258
L+SAT+P ++L+++ KFM DPI+ILVK++ELTLE
Sbjct: 216 LISATLPHEILEMTNKFMTDPIRILVKRDELTLE 249
>UNIPROTKB|P38919 [details] [associations]
symbol:EIF4A3 "Eukaryotic initiation factor 4A-III"
species:9606 "Homo sapiens" [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0051028 "mRNA transport" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0048026 "positive
regulation of mRNA splicing, via spliceosome" evidence=IEA]
[GO:0016607 "nuclear speck" evidence=IEA] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0045727 "positive regulation
of translation" evidence=IMP] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IC] [GO:0035145 "exon-exon junction complex"
evidence=IDA] [GO:0000184 "nuclear-transcribed mRNA catabolic
process, nonsense-mediated decay" evidence=IMP;TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=IDA] [GO:0005524 "ATP binding"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0008143
"poly(A) RNA binding" evidence=IDA] [GO:0017148 "negative
regulation of translation" evidence=IDA] [GO:0000288
"nuclear-transcribed mRNA catabolic process,
deadenylation-dependent decay" evidence=TAS] [GO:0000289
"nuclear-transcribed mRNA poly(A) tail shortening" evidence=TAS]
[GO:0005829 "cytosol" evidence=TAS] [GO:0010467 "gene expression"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0019221
"cytokine-mediated signaling pathway" evidence=TAS]
Reactome:REACT_71 Reactome:REACT_21257 InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005829
GO:GO:0005524 Reactome:REACT_6900 GO:GO:0000184 GO:GO:0017148
GO:GO:0016607 GO:GO:0019221 TCDB:3.A.18.1.1 EMBL:CH471099
GO:GO:0045727 GO:GO:0051028 GO:GO:0000398 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0004004 GO:GO:0000289 EMBL:AC087741 GO:GO:0035145 PDB:2HYI
PDB:2J0Q PDB:2J0S PDB:2J0U PDB:2XB2 PDB:3EX7 PDBsum:2HYI
PDBsum:2J0Q PDBsum:2J0S PDBsum:2J0U PDBsum:2XB2 PDBsum:3EX7
eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0008143 HOVERGEN:HBG107989 KO:K13025
OMA:EDWKFDT CTD:9775 OrthoDB:EOG4229JV EMBL:X79538 EMBL:D21853
EMBL:AK290608 EMBL:CR456750 EMBL:BC003662 EMBL:BC004386
EMBL:BC011151 IPI:IPI00009328 PIR:S45142 RefSeq:NP_055555.1
UniGene:Hs.389649 PDB:2HXY PDBsum:2HXY ProteinModelPortal:P38919
SMR:P38919 DIP:DIP-33218N IntAct:P38919 MINT:MINT-1460615
STRING:P38919 PhosphoSite:P38919 DMDM:20532400
REPRODUCTION-2DPAGE:IPI00009328 PaxDb:P38919 PeptideAtlas:P38919
PRIDE:P38919 DNASU:9775 Ensembl:ENST00000269349 GeneID:9775
KEGG:hsa:9775 UCSC:uc002jxs.3 GeneCards:GC17M078109 HGNC:HGNC:18683
HPA:HPA021878 MIM:608546 neXtProt:NX_P38919 PharmGKB:PA162384945
InParanoid:P38919 PhylomeDB:P38919 ChiTaRS:EIF4A3
EvolutionaryTrace:P38919 GenomeRNAi:9775 NextBio:36802 Bgee:P38919
CleanEx:HS_EIF4A3 Genevestigator:P38919 GermOnline:ENSG00000141543
Uniprot:P38919
Length = 411
Score = 741 (265.9 bits), Expect = 2.2e-73, P = 2.2e-73
Identities = 145/214 (67%), Positives = 179/214 (83%)
Query: 45 VAENFDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGNDVIAQAQSGTGKTATFSIS 104
V FD M L E+LLRGIYAYGFEKPSAIQQRAI ++G DVIAQ+QSGTGKTATFSIS
Sbjct: 36 VTPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSIS 95
Query: 105 ILQQVDQNIKECQALILAPTRELAQQIQKVVIALGDFMSVSCHACIGGTIVRDDIRKLEA 164
+LQ +D ++E QALILAPTRELA QIQK ++ALGD+M+V CHACIGGT V +DIRKL+
Sbjct: 96 VLQCLDIQVRETQALILAPTRELAVQIQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDY 155
Query: 165 GAQVVVGTPGRVFDMISRGALSTKQIRMFVLDEADEMLSRGFKDQIYDVFKHLNNDVQVI 224
G VV GTPGRVFDMI R +L T+ I+M VLDEADEML++GFK+QIYDV+++L QV+
Sbjct: 156 GQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVV 215
Query: 225 LLSATMPADVLDVSMKFMRDPIKILVKKEELTLE 258
L+SAT+P ++L+++ KFM DPI+ILVK++ELTLE
Sbjct: 216 LISATLPHEILEMTNKFMTDPIRILVKRDELTLE 249
>UNIPROTKB|A6M931 [details] [associations]
symbol:EIF4A3 "Eukaryotic initiation factor 4A-III"
species:9823 "Sus scrofa" [GO:0016607 "nuclear speck" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0051028 "mRNA transport"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0006417
"regulation of translation" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0000184 "nuclear-transcribed mRNA catabolic
process, nonsense-mediated decay" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0006417 GO:GO:0000184 GO:GO:0008380
GO:GO:0016607 GO:GO:0006397 GO:GO:0005681 GO:GO:0003723
GO:GO:0051028 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 KO:K13025 CTD:9775
OrthoDB:EOG4229JV EMBL:DQ351286 RefSeq:NP_001093663.1
UniGene:Ssc.869 ProteinModelPortal:A6M931 SMR:A6M931 PRIDE:A6M931
GeneID:100101926 KEGG:ssc:100101926 Uniprot:A6M931
Length = 411
Score = 741 (265.9 bits), Expect = 2.2e-73, P = 2.2e-73
Identities = 145/214 (67%), Positives = 179/214 (83%)
Query: 45 VAENFDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGNDVIAQAQSGTGKTATFSIS 104
V FD M L E+LLRGIYAYGFEKPSAIQQRAI ++G DVIAQ+QSGTGKTATFSIS
Sbjct: 36 VTPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSIS 95
Query: 105 ILQQVDQNIKECQALILAPTRELAQQIQKVVIALGDFMSVSCHACIGGTIVRDDIRKLEA 164
+LQ +D ++E QALILAPTRELA QIQK ++ALGD+M+V CHACIGGT V +DIRKL+
Sbjct: 96 VLQCLDIQVRETQALILAPTRELAVQIQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDY 155
Query: 165 GAQVVVGTPGRVFDMISRGALSTKQIRMFVLDEADEMLSRGFKDQIYDVFKHLNNDVQVI 224
G VV GTPGRVFDMI R +L T+ I+M VLDEADEML++GFK+QIYDV+++L QV+
Sbjct: 156 GQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVV 215
Query: 225 LLSATMPADVLDVSMKFMRDPIKILVKKEELTLE 258
L+SAT+P ++L+++ KFM DPI+ILVK++ELTLE
Sbjct: 216 LISATLPHEILEMTNKFMTDPIRILVKRDELTLE 249
>RGD|1591139 [details] [associations]
symbol:Eif4a3 "eukaryotic translation initiation factor 4A,
isoform 3" species:10116 "Rattus norvegicus" [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008143 "poly(A) RNA binding" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0016607 "nuclear speck" evidence=IEA]
[GO:0017148 "negative regulation of translation" evidence=IEA]
[GO:0035145 "exon-exon junction complex" evidence=IEA] [GO:0045727
"positive regulation of translation" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0048026 "positive regulation of mRNA
splicing, via spliceosome" evidence=IEA] [GO:0051028 "mRNA
transport" evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 RGD:1591139 GO:GO:0005524
GO:GO:0005737 GO:GO:0006417 GO:GO:0000184 GO:GO:0008380
GO:GO:0016607 GO:GO:0006397 GO:GO:0005681 GO:GO:0003723
EMBL:CH473948 GO:GO:0051028 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HSSP:P60842 KO:K13025 CTD:9775 EMBL:BC105875
IPI:IPI00656385 RefSeq:NP_001093628.1 UniGene:Rn.202617
ProteinModelPortal:Q3B8Q2 SMR:Q3B8Q2 PRIDE:Q3B8Q2 GeneID:688288
KEGG:rno:688288 NextBio:736113 Genevestigator:Q3B8Q2 Uniprot:Q3B8Q2
Length = 411
Score = 741 (265.9 bits), Expect = 2.2e-73, P = 2.2e-73
Identities = 145/214 (67%), Positives = 179/214 (83%)
Query: 45 VAENFDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGNDVIAQAQSGTGKTATFSIS 104
V FD M L E+LLRGIYAYGFEKPSAIQQRAI ++G DVIAQ+QSGTGKTATFSIS
Sbjct: 36 VTPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSIS 95
Query: 105 ILQQVDQNIKECQALILAPTRELAQQIQKVVIALGDFMSVSCHACIGGTIVRDDIRKLEA 164
+LQ +D ++E QALILAPTRELA QIQK ++ALGD+M+V CHACIGGT V +DIRKL+
Sbjct: 96 VLQCLDIQVRETQALILAPTRELAVQIQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDY 155
Query: 165 GAQVVVGTPGRVFDMISRGALSTKQIRMFVLDEADEMLSRGFKDQIYDVFKHLNNDVQVI 224
G VV GTPGRVFDMI R +L T+ I+M VLDEADEML++GFK+QIYDV+++L QV+
Sbjct: 156 GQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVV 215
Query: 225 LLSATMPADVLDVSMKFMRDPIKILVKKEELTLE 258
L+SAT+P ++L+++ KFM DPI+ILVK++ELTLE
Sbjct: 216 LISATLPHEILEMTNKFMTDPIRILVKRDELTLE 249
>TAIR|locus:2030285 [details] [associations]
symbol:AT1G72730 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0009505
"plant-type cell wall" evidence=IDA] [GO:0005774 "vacuolar
membrane" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=RCA] [GO:0009744 "response
to sucrose stimulus" evidence=RCA] [GO:0009749 "response to glucose
stimulus" evidence=RCA] [GO:0009750 "response to fructose stimulus"
evidence=RCA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005524 GO:GO:0005774
GO:GO:0009505 GO:GO:0003743 EMBL:AC010926 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195 KO:K03257
ProtClustDB:CLSN2679594 EMBL:AJ010472 EMBL:AY060592 EMBL:AY142066
EMBL:AY088176 IPI:IPI00526542 PIR:B96752 PIR:T51347
RefSeq:NP_177417.1 UniGene:At.22983 ProteinModelPortal:Q9CAI7
SMR:Q9CAI7 IntAct:Q9CAI7 STRING:Q9CAI7 PaxDb:Q9CAI7 PRIDE:Q9CAI7
EnsemblPlants:AT1G72730.1 GeneID:843605 KEGG:ath:AT1G72730
GeneFarm:940 TAIR:At1g72730 InParanoid:Q9CAI7 OMA:AVINYHI
PhylomeDB:Q9CAI7 Genevestigator:Q9CAI7 GermOnline:AT1G72730
Uniprot:Q9CAI7
Length = 414
Score = 739 (265.2 bits), Expect = 3.6e-73, P = 3.6e-73
Identities = 143/219 (65%), Positives = 178/219 (81%)
Query: 40 TNWDHVAENFDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGNDVIAQAQSGTGKTA 99
TN+D V ++FD MEL +LLRGIYAYGFEKPSAIQQR IIP +G DVI QAQSGTGKTA
Sbjct: 34 TNYDEVCDSFDAMELQPDLLRGIYAYGFEKPSAIQQRGIIPFCKGLDVIQQAQSGTGKTA 93
Query: 100 TFSISILQQVDQNIKECQALILAPTRELAQQIQKVVIALGDFMSVSCHACIGGTIVRDDI 159
TF +LQQ+D ++ +CQAL+LAPTRELAQQI+KV+ ALGD++ V AC+GGT VR+D
Sbjct: 94 TFCSGVLQQLDISLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKAQACVGGTSVREDQ 153
Query: 160 RKLEAGAQVVVGTPGRVFDMISRGALSTKQIRMFVLDEADEMLSRGFKDQIYDVFKHLNN 219
R L++G VVVGTPGRVFD++ R +L I+MFVLDEADEMLSRGFKDQIYD+F+ L +
Sbjct: 154 RVLQSGVHVVVGTPGRVFDLLRRQSLRADAIKMFVLDEADEMLSRGFKDQIYDIFQLLPS 213
Query: 220 DVQVILLSATMPADVLDVSMKFMRDPIKILVKKEELTLE 258
VQV + SATMP + L+++ KFM P++ILVK++ELTLE
Sbjct: 214 KVQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLE 252
>TAIR|locus:2088237 [details] [associations]
symbol:EIF4A1 "eukaryotic translation initiation factor
4A1" species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003743 "translation initiation factor
activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA;ISS]
[GO:0006413 "translational initiation" evidence=ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005618 "cell wall" evidence=IDA] [GO:0046686
"response to cadmium ion" evidence=IEP;RCA] [GO:0016020 "membrane"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0048046 "apoplast" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=RCA] [GO:0006094
"gluconeogenesis" evidence=RCA] [GO:0006096 "glycolysis"
evidence=RCA] [GO:0009651 "response to salt stress" evidence=RCA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005829 GO:GO:0009506 GO:GO:0005524
GO:GO:0005618 GO:GO:0046686 EMBL:CP002686 GO:GO:0005730
GO:GO:0016020 GO:GO:0048046 GO:GO:0006413 GO:GO:0003743
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 KO:K03257 OMA:SKRERIM
IPI:IPI00657454 RefSeq:NP_001030693.1 UniGene:At.23558
UniGene:At.28184 ProteinModelPortal:F4JEL4 SMR:F4JEL4 PRIDE:F4JEL4
EnsemblPlants:AT3G13920.2 GeneID:820605 KEGG:ath:AT3G13920
Uniprot:F4JEL4
Length = 415
Score = 738 (264.8 bits), Expect = 4.6e-73, P = 4.6e-73
Identities = 144/219 (65%), Positives = 177/219 (80%)
Query: 40 TNWDHVAENFDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGNDVIAQAQSGTGKTA 99
T++D V E+FD M L E LLRGIYAYGFEKPSAIQQR I+P +G DVI QAQSGTGKTA
Sbjct: 32 TSYDDVHESFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTA 91
Query: 100 TFSISILQQVDQNIKECQALILAPTRELAQQIQKVVIALGDFMSVSCHACIGGTIVRDDI 159
TF +LQQ+D ++ +CQAL+LAPTRELAQQI+KV+ ALGD++ V HAC+GGT VR+D
Sbjct: 92 TFCSGVLQQLDFSLIQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQ 151
Query: 160 RKLEAGAQVVVGTPGRVFDMISRGALSTKQIRMFVLDEADEMLSRGFKDQIYDVFKHLNN 219
R L+AG VVVGTPGRVFDM+ R +L I+MFVLDEADEMLSRGFKDQIYD+F+ L
Sbjct: 152 RILQAGVHVVVGTPGRVFDMLKRQSLRADNIKMFVLDEADEMLSRGFKDQIYDIFQLLPP 211
Query: 220 DVQVILLSATMPADVLDVSMKFMRDPIKILVKKEELTLE 258
+QV + SATMP + L+++ KFM P++ILVK++ELTLE
Sbjct: 212 KIQVGVFSATMPPEALEITRKFMSKPVRILVKRDELTLE 250
>ZFIN|ZDB-GENE-040426-915 [details] [associations]
symbol:eif4a3 "eukaryotic translation initiation
factor 4A, isoform 3" species:7955 "Danio rerio" [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0051028 "mRNA transport" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006417 "regulation of
translation" evidence=IEA] [GO:0016607 "nuclear speck"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 ZFIN:ZDB-GENE-040426-915
GO:GO:0005524 GO:GO:0005737 GO:GO:0006417 GO:GO:0000184
GO:GO:0008380 GO:GO:0016607 GO:GO:0006397 GO:GO:0003723
GO:GO:0051028 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 KO:K13025 CTD:9775
OrthoDB:EOG4229JV EMBL:BC045939 IPI:IPI00481285 RefSeq:NP_957372.1
UniGene:Dr.78203 ProteinModelPortal:Q7ZVA6 SMR:Q7ZVA6 STRING:Q7ZVA6
PRIDE:Q7ZVA6 GeneID:394053 KEGG:dre:394053 InParanoid:Q7ZVA6
NextBio:20815014 ArrayExpress:Q7ZVA6 Uniprot:Q7ZVA6
Length = 406
Score = 738 (264.8 bits), Expect = 4.6e-73, P = 4.6e-73
Identities = 144/214 (67%), Positives = 178/214 (83%)
Query: 45 VAENFDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGNDVIAQAQSGTGKTATFSIS 104
V FD M L E+LLRGIYAYGFEKPSAIQQRAI ++G DVIAQ+QSGTGKTATF +S
Sbjct: 31 VTPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFCVS 90
Query: 105 ILQQVDQNIKECQALILAPTRELAQQIQKVVIALGDFMSVSCHACIGGTIVRDDIRKLEA 164
+LQ +D ++E QALILAPTRELA QIQKV++ALGD+M+V CHACIGGT V +DIRKL+
Sbjct: 91 VLQCLDIQVRETQALILAPTRELAGQIQKVLLALGDYMNVQCHACIGGTNVGEDIRKLDY 150
Query: 165 GAQVVVGTPGRVFDMISRGALSTKQIRMFVLDEADEMLSRGFKDQIYDVFKHLNNDVQVI 224
G VV GTPGRVFDMI R +L T+ I+M VLDEADEML++GFK+QIYDV+++L QV
Sbjct: 151 GQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVC 210
Query: 225 LLSATMPADVLDVSMKFMRDPIKILVKKEELTLE 258
L+SAT+P ++L+++ KFM DPI+ILVK++ELTLE
Sbjct: 211 LISATLPHEILEMTNKFMTDPIRILVKRDELTLE 244
>WB|WBGene00018007 [details] [associations]
symbol:F33D11.10 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0009790 "embryo development"
evidence=IMP] [GO:0001703 "gastrulation with mouth forming first"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0051301
"cell division" evidence=IMP] [GO:0000910 "cytokinesis"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0018996 "molting
cycle, collagen and cuticulin-based cuticle" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0009792 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 GO:GO:0018996 GO:GO:0003676
GO:GO:0000910 GO:GO:0040035 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
GeneTree:ENSGT00530000062880 GO:GO:0001703 KO:K13025 OMA:IFGKQPF
EMBL:FO080753 PIR:T32773 RefSeq:NP_491703.1
ProteinModelPortal:O44781 SMR:O44781 DIP:DIP-27243N IntAct:O44781
MINT:MINT-1047941 STRING:O44781 PaxDb:O44781
EnsemblMetazoa:F33D11.10.1 EnsemblMetazoa:F33D11.10.2 GeneID:172258
KEGG:cel:CELE_F33D11.10 UCSC:F33D11.10.1 CTD:172258
WormBase:F33D11.10 InParanoid:O44781 NextBio:874709 Uniprot:O44781
Length = 399
Score = 737 (264.5 bits), Expect = 5.9e-73, P = 5.9e-73
Identities = 142/215 (66%), Positives = 179/215 (83%)
Query: 44 HVAENFDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGNDVIAQAQSGTGKTATFSI 103
+V FD M L E+LLRGIYAYGFEKPSAIQQRA+ ++ DVIAQAQSGTGKTATFSI
Sbjct: 23 NVIPTFDKMGLREDLLRGIYAYGFEKPSAIQQRAVPAILKARDVIAQAQSGTGKTATFSI 82
Query: 104 SILQQVDQNIKECQALILAPTRELAQQIQKVVIALGDFMSVSCHACIGGTIVRDDIRKLE 163
S+LQ +D ++E QALIL+PTRELA QIQKVV+ALGD+M+V CHACIGGT + +DIRKL+
Sbjct: 83 SVLQSLDTQVRETQALILSPTRELAVQIQKVVLALGDYMNVQCHACIGGTNLGEDIRKLD 142
Query: 164 AGAQVVVGTPGRVFDMISRGALSTKQIRMFVLDEADEMLSRGFKDQIYDVFKHLNNDVQV 223
G VV GTPGRVFDMI R L T+ I++ VLDEADEML++GFK+Q+YD++++L QV
Sbjct: 143 YGQHVVSGTPGRVFDMIRRRNLRTRAIKLLVLDEADEMLNKGFKEQLYDIYRYLPPGAQV 202
Query: 224 ILLSATMPADVLDVSMKFMRDPIKILVKKEELTLE 258
+LLSAT+P ++L+++ KFM DPI+ILVK++ELTLE
Sbjct: 203 VLLSATLPHEILEMTSKFMTDPIRILVKRDELTLE 237
>UNIPROTKB|J3QR64 [details] [associations]
symbol:EIF4A1 "Eukaryotic initiation factor 4A-I"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR011545 Pfam:PF00270 PROSITE:PS00039
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
EMBL:AC016876 HGNC:HGNC:3282 ChiTaRS:EIF4A1 Ensembl:ENST00000581384
Uniprot:J3QR64
Length = 214
Score = 736 (264.1 bits), Expect = 7.5e-73, P = 7.5e-73
Identities = 139/192 (72%), Positives = 168/192 (87%)
Query: 27 NGPPGMAVDGLIETNWDHVAENFDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGND 86
NGP GM +G+IE+NW+ + ++FDDM LSE LLRGIYAYGFEKPSAIQQRAI+PC++G D
Sbjct: 23 NGPDGMEPEGVIESNWNEIVDSFDDMNLSESLLRGIYAYGFEKPSAIQQRAILPCIKGYD 82
Query: 87 VIAQAQSGTGKTATFSISILQQVDQNIKECQALILAPTRELAQQIQKVVIALGDFMSVSC 146
VIAQAQSGTGKTATF+ISILQQ++ ++K QAL+LAPTRELAQQIQKVV+ALGD+M SC
Sbjct: 83 VIAQAQSGTGKTATFAISILQQIELDLKATQALVLAPTRELAQQIQKVVMALGDYMGASC 142
Query: 147 HACIGGTIVRDDIRKLEAGA-QVVVGTPGRVFDMISRGALSTKQIRMFVLDEADEMLSRG 205
HACIGGT VR +++KL+ A ++VGTPGRVFDM++R LS K I+MFVLDEADEMLSRG
Sbjct: 143 HACIGGTNVRAEVQKLQMEAPHIIVGTPGRVFDMLNRRYLSPKYIKMFVLDEADEMLSRG 202
Query: 206 FKDQIYDVFKHL 217
FKDQIYD+F+ L
Sbjct: 203 FKDQIYDIFQKL 214
>WB|WBGene00022029 [details] [associations]
symbol:Y65B4A.6 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0018991 "oviposition" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0018996 "molting cycle, collagen and
cuticulin-based cuticle" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0042127 "regulation of cell proliferation" evidence=IMP]
[GO:0040020 "regulation of meiosis" evidence=IMP] [GO:0007281 "germ
cell development" evidence=IMP] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0009792 GO:GO:0040007 GO:GO:0018991 GO:GO:0002119
GO:GO:0018996 GO:GO:0040011 GO:GO:0003676 GO:GO:0042127
GO:GO:0040035 GO:GO:0007281 GO:GO:0040020 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
GeneTree:ENSGT00530000062880 KO:K13025 OMA:EDWKFDT EMBL:FO081482
RefSeq:NP_490761.2 ProteinModelPortal:Q9BL61 SMR:Q9BL61
STRING:Q9BL61 PaxDb:Q9BL61 EnsemblMetazoa:Y65B4A.6 GeneID:190485
KEGG:cel:CELE_Y65B4A.6 UCSC:Y65B4A.6 CTD:190485 WormBase:Y65B4A.6
InParanoid:Q9BL61 NextBio:945920 Uniprot:Q9BL61
Length = 399
Score = 736 (264.1 bits), Expect = 7.5e-73, P = 7.5e-73
Identities = 142/214 (66%), Positives = 178/214 (83%)
Query: 45 VAENFDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGNDVIAQAQSGTGKTATFSIS 104
+ FD M L E+LLRGIYAYGFEKPSAIQQRAI ++ DVIAQAQSGTGKTATFSIS
Sbjct: 24 IIPTFDKMGLREDLLRGIYAYGFEKPSAIQQRAIPAILKARDVIAQAQSGTGKTATFSIS 83
Query: 105 ILQQVDQNIKECQALILAPTRELAQQIQKVVIALGDFMSVSCHACIGGTIVRDDIRKLEA 164
+LQ +D ++E QALIL+PTRELA QIQKVV+ALGD+M+V CHACIGGT + +DIRKL+
Sbjct: 84 VLQSLDTQVRETQALILSPTRELAVQIQKVVLALGDYMNVQCHACIGGTNLGEDIRKLDY 143
Query: 165 GAQVVVGTPGRVFDMISRGALSTKQIRMFVLDEADEMLSRGFKDQIYDVFKHLNNDVQVI 224
G VV GTPGRVFDMI R L T+ I++ VLDEADEML++GFK+Q+YD++++L QV+
Sbjct: 144 GQHVVSGTPGRVFDMIRRRNLRTRAIKLLVLDEADEMLNKGFKEQLYDIYRYLPPGAQVV 203
Query: 225 LLSATMPADVLDVSMKFMRDPIKILVKKEELTLE 258
LLSAT+P ++L+++ KFM DPI+ILVK++ELTLE
Sbjct: 204 LLSATLPHEILEMTSKFMTDPIRILVKRDELTLE 237
>TAIR|locus:2020078 [details] [associations]
symbol:EIF4A-2 "eif4a-2" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003743 "translation initiation factor activity" evidence=ISS]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA;ISS]
[GO:0046686 "response to cadmium ion" evidence=IEP;RCA] [GO:0005774
"vacuolar membrane" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=RCA] [GO:0006094 "gluconeogenesis" evidence=RCA]
[GO:0006096 "glycolysis" evidence=RCA] [GO:0009651 "response to
salt stress" evidence=RCA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005886 GO:GO:0009506
GO:GO:0005524 GO:GO:0005774 GO:GO:0046686 EMBL:AC005287
GO:GO:0003743 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 KO:K03257 EMBL:X65053
EMBL:AF386923 EMBL:AF428462 EMBL:BT008504 EMBL:AK226344
EMBL:AY087965 IPI:IPI00522023 PIR:JC1453 RefSeq:NP_175829.1
UniGene:At.195 ProteinModelPortal:P41377 SMR:P41377 STRING:P41377
PaxDb:P41377 PRIDE:P41377 ProMEX:P41377 EnsemblPlants:AT1G54270.1
GeneID:841868 KEGG:ath:AT1G54270 GeneFarm:936 TAIR:At1g54270
InParanoid:P41377 OMA:QVVWEEN PhylomeDB:P41377
ProtClustDB:CLSN2679594 Genevestigator:P41377 GermOnline:AT1G54270
Uniprot:P41377
Length = 412
Score = 734 (263.4 bits), Expect = 1.2e-72, P = 1.2e-72
Identities = 147/227 (64%), Positives = 179/227 (78%)
Query: 34 VDGLIE--TNWDHVAENFDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGNDVIAQA 91
+DG E T++D V E+FD M L E LLRGIYAYGFEKPSAIQQR I+P +G DVI QA
Sbjct: 24 LDGQDEFFTSYDEVHESFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQA 83
Query: 92 QSGTGKTATFSISILQQVDQNIKECQALILAPTRELAQQIQKVVIALGDFMSVSCHACIG 151
QSGTGKTATF +LQQ+D + +CQAL+LAPTRELAQQI+KV+ ALGD+ V HAC+G
Sbjct: 84 QSGTGKTATFCSGVLQQLDYALLQCQALVLAPTRELAQQIEKVMRALGDYQGVKVHACVG 143
Query: 152 GTIVRDDIRKLEAGAQVVVGTPGRVFDMISRGALSTKQIRMFVLDEADEMLSRGFKDQIY 211
GT VR+D R L+AG VVVGTPGRVFDM+ R +L I+MFVLDEADEMLSRGFKDQIY
Sbjct: 144 GTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDCIKMFVLDEADEMLSRGFKDQIY 203
Query: 212 DVFKHLNNDVQVILLSATMPADVLDVSMKFMRDPIKILVKKEELTLE 258
D+F+ L +QV + SATMP + L+++ KFM P++ILVK++ELTLE
Sbjct: 204 DIFQLLPPKIQVGVFSATMPPEALEITRKFMSKPVRILVKRDELTLE 250
>ASPGD|ASPL0000014018 [details] [associations]
symbol:fal1 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0003723 EMBL:BN001302 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195
EMBL:AACD01000139 KO:K13025 RefSeq:XP_681285.1
ProteinModelPortal:Q5AUL4 SMR:Q5AUL4 PRIDE:Q5AUL4
EnsemblFungi:CADANIAT00004036 GeneID:2869287 KEGG:ani:AN8016.2
OMA:EDWKFDT OrthoDB:EOG4HTD1W Uniprot:Q5AUL4
Length = 399
Score = 722 (259.2 bits), Expect = 2.3e-71, P = 2.3e-71
Identities = 137/214 (64%), Positives = 174/214 (81%)
Query: 45 VAENFDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGNDVIAQAQSGTGKTATFSIS 104
VA F+DM L E LLRGIYAYG+E PSA+Q RAI+ +G D IAQAQSGTGKTATFSIS
Sbjct: 23 VAPTFEDMHLKESLLRGIYAYGYESPSAVQSRAIVQICKGRDTIAQAQSGTGKTATFSIS 82
Query: 105 ILQQVDQNIKECQALILAPTRELAQQIQKVVIALGDFMSVSCHACIGGTIVRDDIRKLEA 164
LQ +D ++E QAL+L+PTRELA QIQ V++ALGD+M+V CHACIGGT + +DIRKL+
Sbjct: 83 ALQVIDTVVRETQALVLSPTRELATQIQSVIMALGDYMNVQCHACIGGTNIGEDIRKLDY 142
Query: 165 GAQVVVGTPGRVFDMISRGALSTKQIRMFVLDEADEMLSRGFKDQIYDVFKHLNNDVQVI 224
G VV GTPGRV DMI R L T+ I+M VLDEADE+L+RGF++QIYDV+++L QV+
Sbjct: 143 GQHVVSGTPGRVADMIRRRHLRTRHIKMLVLDEADELLNRGFREQIYDVYRYLPPATQVV 202
Query: 225 LLSATMPADVLDVSMKFMRDPIKILVKKEELTLE 258
++SAT+P DVLD++ KFM DP+++LVK++ELTLE
Sbjct: 203 VVSATLPYDVLDMTTKFMTDPVRVLVKRDELTLE 236
>CGD|CAL0004095 [details] [associations]
symbol:TIF species:5476 "Candida albicans" [GO:0003743
"translation initiation factor activity" evidence=ISS] [GO:0006413
"translational initiation" evidence=ISS] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016281 "eukaryotic translation initiation factor 4F complex"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 CGD:CAL0004095 GO:GO:0005524
GO:GO:0005737 GO:GO:0003743 EMBL:AACQ01000045 EMBL:AACQ01000042
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K03257
EMBL:D84472 RefSeq:XP_718147.1 RefSeq:XP_718416.1
ProteinModelPortal:P87206 STRING:P87206 PRIDE:P87206 GeneID:3639917
GeneID:3640190 KEGG:cal:CaO19.10834 KEGG:cal:CaO19.3324
Uniprot:P87206
Length = 397
Score = 720 (258.5 bits), Expect = 3.7e-71, P = 3.7e-71
Identities = 137/223 (61%), Positives = 176/223 (78%)
Query: 36 GLIETNWDHVAENFDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGNDVIAQAQSGT 95
GLIETN+D+V FDD+ L ++RGI+ YG+E PSAIQQRAI+P G DV+AQAQSGT
Sbjct: 12 GLIETNYDNVVYKFDDLNLKPNIVRGIFGYGYETPSAIQQRAILPITEGRDVLAQAQSGT 71
Query: 96 GKTATFSISILQQVDQNIKECQALILAPTRELAQQIQKVVIALGDFMSVSCHACIGGTIV 155
GKTATF+IS LQ++++N K QALILAPTRELA QI+ V+ A+G ++ V+ HA IGGT +
Sbjct: 72 GKTATFTISALQRINENEKATQALILAPTRELALQIKNVITAIGLYLKVTVHASIGGTSM 131
Query: 156 RDDIRKLEAGAQVVVGTPGRVFDMISRGALSTKQIRMFVLDEADEMLSRGFKDQIYDVFK 215
DDI +G Q+VVGTPGRV DMI R T +++MF+LDEADEMLS GFK+QIY++F+
Sbjct: 132 SDDIEAFRSGVQIVVGTPGRVLDMIERRYFKTDKVKMFILDEADEMLSSGFKEQIYNIFR 191
Query: 216 HLNNDVQVILLSATMPADVLDVSMKFMRDPIKILVKKEELTLE 258
L Q++LLSATMP DVL+V+ KFM +P++ILVKK+ELTLE
Sbjct: 192 LLPETTQIVLLSATMPQDVLEVTTKFMNNPVRILVKKDELTLE 234
>UNIPROTKB|P87206 [details] [associations]
symbol:TIF1 "ATP-dependent RNA helicase eIF4A"
species:237561 "Candida albicans SC5314" [GO:0003743 "translation
initiation factor activity" evidence=ISS] [GO:0006413
"translational initiation" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 CGD:CAL0004095
GO:GO:0005524 GO:GO:0005737 GO:GO:0003743 EMBL:AACQ01000045
EMBL:AACQ01000042 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K03257 EMBL:D84472 RefSeq:XP_718147.1 RefSeq:XP_718416.1
ProteinModelPortal:P87206 STRING:P87206 PRIDE:P87206 GeneID:3639917
GeneID:3640190 KEGG:cal:CaO19.10834 KEGG:cal:CaO19.3324
Uniprot:P87206
Length = 397
Score = 720 (258.5 bits), Expect = 3.7e-71, P = 3.7e-71
Identities = 137/223 (61%), Positives = 176/223 (78%)
Query: 36 GLIETNWDHVAENFDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGNDVIAQAQSGT 95
GLIETN+D+V FDD+ L ++RGI+ YG+E PSAIQQRAI+P G DV+AQAQSGT
Sbjct: 12 GLIETNYDNVVYKFDDLNLKPNIVRGIFGYGYETPSAIQQRAILPITEGRDVLAQAQSGT 71
Query: 96 GKTATFSISILQQVDQNIKECQALILAPTRELAQQIQKVVIALGDFMSVSCHACIGGTIV 155
GKTATF+IS LQ++++N K QALILAPTRELA QI+ V+ A+G ++ V+ HA IGGT +
Sbjct: 72 GKTATFTISALQRINENEKATQALILAPTRELALQIKNVITAIGLYLKVTVHASIGGTSM 131
Query: 156 RDDIRKLEAGAQVVVGTPGRVFDMISRGALSTKQIRMFVLDEADEMLSRGFKDQIYDVFK 215
DDI +G Q+VVGTPGRV DMI R T +++MF+LDEADEMLS GFK+QIY++F+
Sbjct: 132 SDDIEAFRSGVQIVVGTPGRVLDMIERRYFKTDKVKMFILDEADEMLSSGFKEQIYNIFR 191
Query: 216 HLNNDVQVILLSATMPADVLDVSMKFMRDPIKILVKKEELTLE 258
L Q++LLSATMP DVL+V+ KFM +P++ILVKK+ELTLE
Sbjct: 192 LLPETTQIVLLSATMPQDVLEVTTKFMNNPVRILVKKDELTLE 234
>SGD|S000001767 [details] [associations]
symbol:TIF1 "Translation initiation factor eIF4A"
species:4932 "Saccharomyces cerevisiae" [GO:0003743 "translation
initiation factor activity" evidence=IEA;IMP;IDA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0006413 "translational
initiation" evidence=IEA;IMP;IDA] [GO:0006412 "translation"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IMP;IDA] [GO:0005840 "ribosome" evidence=TAS] [GO:0016281
"eukaryotic translation initiation factor 4F complex"
evidence=IGI;ISS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 SGD:S000001767
SGD:S000003674 GO:GO:0005524 GO:GO:0005737 EMBL:BK006943
EMBL:BK006944 GO:GO:0003743 EMBL:X87371 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 KO:K03854
eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00530000062880 EMBL:U25436 KO:K03257
OMA:IKMFILD OrthoDB:EOG4PG98F EMBL:X12813 EMBL:X12814 EMBL:X58099
EMBL:Z49413 EMBL:Z28284 PIR:S05835 RefSeq:NP_012397.1
RefSeq:NP_012985.3 RefSeq:NP_012987.3 PDB:1FUK PDB:1FUU PDB:1QDE
PDB:1QVA PDB:2VSO PDB:2VSX PDBsum:1FUK PDBsum:1FUU PDBsum:1QDE
PDBsum:1QVA PDBsum:2VSO PDBsum:2VSX ProteinModelPortal:P10081
SMR:P10081 DIP:DIP-4571N IntAct:P10081 MINT:MINT-546056
STRING:P10081 SWISS-2DPAGE:P10081 PaxDb:P10081 EnsemblFungi:YJL138C
EnsemblFungi:YKR059W GeneID:853303 GeneID:853933 GeneID:853935
KEGG:sce:YJL138C KEGG:sce:YKR059W KEGG:sce:YKR061W SABIO-RK:P10081
EvolutionaryTrace:P10081 NextBio:973627 Genevestigator:P10081
GermOnline:YJL138C GermOnline:YKR059W Uniprot:P10081
Length = 395
Score = 717 (257.5 bits), Expect = 7.7e-71, P = 7.7e-71
Identities = 143/221 (64%), Positives = 174/221 (78%)
Query: 38 IETNWDHVAENFDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGNDVIAQAQSGTGK 97
I+TN+D V FDDMEL E LLRG++ YGFE+PSAIQQRAI+P + G+DV+AQAQSGTGK
Sbjct: 13 IQTNYDKVVYKFDDMELDENLLRGVFGYGFEEPSAIQQRAIMPIIEGHDVLAQAQSGTGK 72
Query: 98 TATFSISILQQVDQNIKECQALILAPTRELAQQIQKVVIALGDFMSVSCHACIGGTIVRD 157
T TFSI+ LQ++D ++K QAL+LAPTRELA QIQKVV+AL M + HACIGGT +
Sbjct: 73 TGTFSIAALQRIDTSVKAPQALMLAPTRELALQIQKVVMALAFHMDIKVHACIGGTSFVE 132
Query: 158 DIRKLEAGAQVVVGTPGRVFDMISRGALSTKQIRMFVLDEADEMLSRGFKDQIYDVFKHL 217
D L AQ+VVGTPGRVFD I R T +I+MF+LDEADEMLS GFK+QIY +F L
Sbjct: 133 DAEGLR-DAQIVVGTPGRVFDNIQRRRFRTDKIKMFILDEADEMLSSGFKEQIYQIFTLL 191
Query: 218 NNDVQVILLSATMPADVLDVSMKFMRDPIKILVKKEELTLE 258
QV+LLSATMP DVL+V+ KFMR+P++ILVKK+ELTLE
Sbjct: 192 PPTTQVVLLSATMPNDVLEVTTKFMRNPVRILVKKDELTLE 232
>SGD|S000003674 [details] [associations]
symbol:TIF2 "Translation initiation factor eIF4A"
species:4932 "Saccharomyces cerevisiae" [GO:0003743 "translation
initiation factor activity" evidence=IEA;ISS;IDA;TAS] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IEA;ISS;IDA] [GO:0006446 "regulation of translational
initiation" evidence=ISS] [GO:0005840 "ribosome" evidence=TAS]
[GO:0016281 "eukaryotic translation initiation factor 4F complex"
evidence=IGI;ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IMP] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0006413 "translational initiation"
evidence=IEA;TAS] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 SGD:S000001767 SGD:S000003674 GO:GO:0005524
GO:GO:0005737 EMBL:BK006943 EMBL:BK006944 GO:GO:0003743 EMBL:X87371
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
KO:K03854 eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00530000062880 EMBL:U25436 KO:K03257
OMA:IKMFILD OrthoDB:EOG4PG98F EMBL:X12813 EMBL:X12814 EMBL:X58099
EMBL:Z49413 EMBL:Z28284 PIR:S05835 RefSeq:NP_012397.1
RefSeq:NP_012985.3 RefSeq:NP_012987.3 PDB:1FUK PDB:1FUU PDB:1QDE
PDB:1QVA PDB:2VSO PDB:2VSX PDBsum:1FUK PDBsum:1FUU PDBsum:1QDE
PDBsum:1QVA PDBsum:2VSO PDBsum:2VSX ProteinModelPortal:P10081
SMR:P10081 DIP:DIP-4571N IntAct:P10081 MINT:MINT-546056
STRING:P10081 SWISS-2DPAGE:P10081 PaxDb:P10081 EnsemblFungi:YJL138C
EnsemblFungi:YKR059W GeneID:853303 GeneID:853933 GeneID:853935
KEGG:sce:YJL138C KEGG:sce:YKR059W KEGG:sce:YKR061W SABIO-RK:P10081
EvolutionaryTrace:P10081 NextBio:973627 Genevestigator:P10081
GermOnline:YJL138C GermOnline:YKR059W Uniprot:P10081
Length = 395
Score = 717 (257.5 bits), Expect = 7.7e-71, P = 7.7e-71
Identities = 143/221 (64%), Positives = 174/221 (78%)
Query: 38 IETNWDHVAENFDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGNDVIAQAQSGTGK 97
I+TN+D V FDDMEL E LLRG++ YGFE+PSAIQQRAI+P + G+DV+AQAQSGTGK
Sbjct: 13 IQTNYDKVVYKFDDMELDENLLRGVFGYGFEEPSAIQQRAIMPIIEGHDVLAQAQSGTGK 72
Query: 98 TATFSISILQQVDQNIKECQALILAPTRELAQQIQKVVIALGDFMSVSCHACIGGTIVRD 157
T TFSI+ LQ++D ++K QAL+LAPTRELA QIQKVV+AL M + HACIGGT +
Sbjct: 73 TGTFSIAALQRIDTSVKAPQALMLAPTRELALQIQKVVMALAFHMDIKVHACIGGTSFVE 132
Query: 158 DIRKLEAGAQVVVGTPGRVFDMISRGALSTKQIRMFVLDEADEMLSRGFKDQIYDVFKHL 217
D L AQ+VVGTPGRVFD I R T +I+MF+LDEADEMLS GFK+QIY +F L
Sbjct: 133 DAEGLR-DAQIVVGTPGRVFDNIQRRRFRTDKIKMFILDEADEMLSSGFKEQIYQIFTLL 191
Query: 218 NNDVQVILLSATMPADVLDVSMKFMRDPIKILVKKEELTLE 258
QV+LLSATMP DVL+V+ KFMR+P++ILVKK+ELTLE
Sbjct: 192 PPTTQVVLLSATMPNDVLEVTTKFMRNPVRILVKKDELTLE 232
>UNIPROTKB|J9NU36 [details] [associations]
symbol:EIF4A1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 GeneTree:ENSGT00530000062880 EMBL:AAEX03006506
EMBL:AAEX03006505 Ensembl:ENSCAFT00000049437 Uniprot:J9NU36
Length = 423
Score = 709 (254.6 bits), Expect = 5.5e-70, P = 5.5e-70
Identities = 137/186 (73%), Positives = 167/186 (89%)
Query: 74 QQRAIIPCVRGNDVIAQAQSGTGKTATFSISILQQVDQNIKECQALILAPTRELAQQIQK 133
+QRAI+PC++G DVIAQAQSGTGKTATF+ISILQQ++ ++K QAL+LAPTRELAQQIQK
Sbjct: 76 RQRAILPCIKGYDVIAQAQSGTGKTATFAISILQQIELDLKATQALVLAPTRELAQQIQK 135
Query: 134 VVIALGDFMSVSCHACIGGTIVRDDIRKLEAGA-QVVVGTPGRVFDMISRGALSTKQIRM 192
VV+ALGD+M SCHACIGGT VR +++KL+ A ++VGTPGRVFDM++R LS K I+M
Sbjct: 136 VVMALGDYMGASCHACIGGTNVRAEVQKLQMEAPHIIVGTPGRVFDMLNRRYLSPKYIKM 195
Query: 193 FVLDEADEMLSRGFKDQIYDVFKHLNNDVQVILLSATMPADVLDVSMKFMRDPIKILVKK 252
FVLDEADEMLSRGFKDQIYD+F+ LN++ QV+LLSATMP+DVL+V+ KFMRDPI+ILVKK
Sbjct: 196 FVLDEADEMLSRGFKDQIYDIFQKLNSNTQVVLLSATMPSDVLEVTKKFMRDPIRILVKK 255
Query: 253 EELTLE 258
EELTLE
Sbjct: 256 EELTLE 261
>POMBASE|SPAC1F5.10 [details] [associations]
symbol:SPAC1F5.10 "ATP-dependent RNA helicase
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=IC]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=ISO] [GO:0005829 "cytosol" evidence=IDA] [GO:0006364 "rRNA
processing" evidence=ISO] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 PomBase:SPAC1F5.10 GO:GO:0005829
GO:GO:0005524 EMBL:CU329670 GO:GO:0005730 GenomeReviews:CU329670_GR
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0004004 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 KO:K13025 OMA:EDWKFDT
OrthoDB:EOG4HTD1W PIR:T38085 RefSeq:NP_592863.1
ProteinModelPortal:Q10055 SMR:Q10055 PRIDE:Q10055
EnsemblFungi:SPAC1F5.10.1 GeneID:2541602 KEGG:spo:SPAC1F5.10
NextBio:20802696 Uniprot:Q10055
Length = 394
Score = 702 (252.2 bits), Expect = 3.0e-69, P = 3.0e-69
Identities = 134/222 (60%), Positives = 179/222 (80%)
Query: 38 IETNWD-HVAENFDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGNDVIAQAQSGTG 96
+ T+ D + +F++M L E+LLRGIYAYG+E PSA+Q RAII +G DVIAQAQSGTG
Sbjct: 11 LTTSEDVNAVSSFEEMNLKEDLLRGIYAYGYETPSAVQSRAIIQICKGRDVIAQAQSGTG 70
Query: 97 KTATFSISILQQVDQNIKECQALILAPTRELAQQIQKVVIALGDFMSVSCHACIGGTIVR 156
KTATFSI ILQ +D ++++ QALIL+PTRELA QIQ VV+ALGD M+V CHACIGGT V
Sbjct: 71 KTATFSIGILQSIDLSVRDTQALILSPTRELAVQIQNVVLALGDHMNVQCHACIGGTSVG 130
Query: 157 DDIRKLEAGAQVVVGTPGRVFDMISRGALSTKQIRMFVLDEADEMLSRGFKDQIYDVFKH 216
+DI+KL+ G VV GTPGRV DMI R L T+ ++M +LDEADE+L++GFK+QIYD++++
Sbjct: 131 NDIKKLDYGQHVVSGTPGRVTDMIRRRNLRTRNVKMLILDEADELLNQGFKEQIYDIYRY 190
Query: 217 LNNDVQVILLSATMPADVLDVSMKFMRDPIKILVKKEELTLE 258
L QV+++SAT+P DVL+++ KF +P++ILVK++ELTLE
Sbjct: 191 LPPGTQVVVVSATLPQDVLEMTNKFTTNPVRILVKRDELTLE 232
>UNIPROTKB|F1RZ83 [details] [associations]
symbol:EIF4A3 "Eukaryotic initiation factor 4A-III"
species:9823 "Sus scrofa" [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0045727 "positive regulation of
translation" evidence=IEA] [GO:0035145 "exon-exon junction complex"
evidence=IEA] [GO:0017148 "negative regulation of translation"
evidence=IEA] [GO:0008143 "poly(A) RNA binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=IEA] [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00530000062880 OMA:EDWKFDT
EMBL:CU655945 Ensembl:ENSSSCT00000018679 ArrayExpress:F1RZ83
Uniprot:F1RZ83
Length = 411
Score = 689 (247.6 bits), Expect = 7.2e-68, P = 7.2e-68
Identities = 134/214 (62%), Positives = 172/214 (80%)
Query: 45 VAENFDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGNDVIAQAQSGTGKTATFSIS 104
V FD M L E+LLRGIYAYG +P A QQR I+ ++ N+ + +QSGTGKTATFSIS
Sbjct: 36 VTPTFDTMGLREDLLRGIYAYGRPEPGAFQQRKILVVMKSNNAVVISQSGTGKTATFSIS 95
Query: 105 ILQQVDQNIKECQALILAPTRELAQQIQKVVIALGDFMSVSCHACIGGTIVRDDIRKLEA 164
+LQ +D ++E QALILAPTRELA QIQK ++ALGD+M+V CHACIGGT V +DIRKL+
Sbjct: 96 VLQCLDIQVRETQALILAPTRELAVQIQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDY 155
Query: 165 GAQVVVGTPGRVFDMISRGALSTKQIRMFVLDEADEMLSRGFKDQIYDVFKHLNNDVQVI 224
G VV GTPGRVFDMI R +L T+ I+M VLDEADEML++GFK+QIYDV+++L QV+
Sbjct: 156 GQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVV 215
Query: 225 LLSATMPADVLDVSMKFMRDPIKILVKKEELTLE 258
L+SAT+P ++L+++ KFM DPI+ILVK++ELTLE
Sbjct: 216 LISATLPHEILEMTNKFMTDPIRILVKRDELTLE 249
>DICTYBASE|DDB_G0269192 [details] [associations]
symbol:tifA "eukaryotic translation initiation factor
4A" species:44689 "Dictyostelium discoideum" [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0006413
"translational initiation" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0003743
"translation initiation factor activity" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 dictyBase:DDB_G0269192 GO:GO:0005524 GO:GO:0005737
EMBL:AAFI02000005 GenomeReviews:CM000150_GR GO:GO:0003743
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
KO:K13025 OMA:LALGDFM RefSeq:XP_646270.1 ProteinModelPortal:Q55D61
SMR:Q55D61 PRIDE:Q55D61 EnsemblProtists:DDB0191511 GeneID:8617226
KEGG:ddi:DDB_G0269192 Uniprot:Q55D61
Length = 405
Score = 681 (244.8 bits), Expect = 5.1e-67, P = 5.1e-67
Identities = 129/214 (60%), Positives = 169/214 (78%)
Query: 45 VAENFDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGNDVIAQAQSGTGKTATFSIS 104
V F+ M L EELLRGI+ YGFEKPSAIQQRAI+P ++G D IAQAQSGTGKTATFSI
Sbjct: 30 VKPTFESMGLREELLRGIFNYGFEKPSAIQQRAILPIIKGRDTIAQAQSGTGKTATFSIG 89
Query: 105 ILQQVDQNIKECQALILAPTRELAQQIQKVVIALGDFMSVSCHACIGGTIVRDDIRKLEA 164
LQ V+ N++ Q LIL+PTRELAQQIQKV +AL +FM++ HAC+GG + DD++KLE
Sbjct: 90 ALQCVEVNVRSPQVLILSPTRELAQQIQKVALALSEFMNIQVHACVGGKNLSDDVKKLET 149
Query: 165 GAQVVVGTPGRVFDMISRGALSTKQIRMFVLDEADEMLSRGFKDQIYDVFKHLNNDVQVI 224
G +V GTPGRV DMI+R +L T+ I+M +LDEADEMLS GF+ QI DV+++L N Q++
Sbjct: 150 GVHIVSGTPGRVLDMITRKSLPTRHIKMMILDEADEMLSLGFQQQINDVYRYLPNGTQIV 209
Query: 225 LLSATMPADVLDVSMKFMRDPIKILVKKEELTLE 258
L+SAT+ DV+ ++ KFM P++IL+K++ELTL+
Sbjct: 210 LVSATLTQDVVSMTEKFMTKPVRILLKRDELTLD 243
>UNIPROTKB|J3KS25 [details] [associations]
symbol:EIF4A1 "Eukaryotic initiation factor 4A-I"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR011545 Pfam:PF00270 PROSITE:PS00039
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
EMBL:AC016876 HGNC:HGNC:3282 ChiTaRS:EIF4A1 Ensembl:ENST00000585024
Uniprot:J3KS25
Length = 188
Score = 678 (243.7 bits), Expect = 1.1e-66, P = 1.1e-66
Identities = 129/179 (72%), Positives = 156/179 (87%)
Query: 27 NGPPGMAVDGLIETNWDHVAENFDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGND 86
NGP GM +G+IE+NW+ + ++FDDM LSE LLRGIYAYGFEKPSAIQQRAI+PC++G D
Sbjct: 10 NGPDGMEPEGVIESNWNEIVDSFDDMNLSESLLRGIYAYGFEKPSAIQQRAILPCIKGYD 69
Query: 87 VIAQAQSGTGKTATFSISILQQVDQNIKECQALILAPTRELAQQIQKVVIALGDFMSVSC 146
VIAQAQSGTGKTATF+ISILQQ++ ++K QAL+LAPTRELAQQIQKVV+ALGD+M SC
Sbjct: 70 VIAQAQSGTGKTATFAISILQQIELDLKATQALVLAPTRELAQQIQKVVMALGDYMGASC 129
Query: 147 HACIGGTIVRDDIRKLEAGA-QVVVGTPGRVFDMISRGALSTKQIRMFVLDEADEMLSR 204
HACIGGT VR +++KL+ A ++VGTPGRVFDM++R LS K I+MFVLDEADEMLSR
Sbjct: 130 HACIGGTNVRAEVQKLQMEAPHIIVGTPGRVFDMLNRRYLSPKYIKMFVLDEADEMLSR 188
>TAIR|locus:2091191 [details] [associations]
symbol:EIF4A-III "eukaryotic initiation factor 4A-III"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA;ISS] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0016020 "membrane" evidence=IDA] [GO:0001666 "response to
hypoxia" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005654 "nucleoplasm" evidence=IDA] [GO:0006397 "mRNA
processing" evidence=IPI] [GO:0016607 "nuclear speck" evidence=IDA]
[GO:0035145 "exon-exon junction complex" evidence=IDA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0005730 GO:GO:0016020
GO:GO:0016607 GO:GO:0001666 GO:GO:0006397 GO:GO:0003723
EMBL:AP000417 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 GO:GO:0035145 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195 KO:K13025
OMA:EDWKFDT EMBL:AJ010456 EMBL:AY050367 EMBL:BT002207
IPI:IPI00522986 PIR:T51737 RefSeq:NP_188610.1 UniGene:At.22577
ProteinModelPortal:Q94A52 SMR:Q94A52 STRING:Q94A52 PaxDb:Q94A52
PRIDE:Q94A52 EnsemblPlants:AT3G19760.1 GeneID:821513
KEGG:ath:AT3G19760 GeneFarm:908 TAIR:At3g19760 InParanoid:Q94A52
PhylomeDB:Q94A52 ProtClustDB:CLSN2915442 Genevestigator:Q94A52
GermOnline:AT3G19760 Uniprot:Q94A52
Length = 408
Score = 675 (242.7 bits), Expect = 2.2e-66, P = 2.2e-66
Identities = 132/233 (56%), Positives = 178/233 (76%)
Query: 28 GPPGMAVDGLIETNWDHVAE--NFDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGN 85
G M D L+ D + +F+DM + E++LRG+Y YGFEKPSAIQQRA++P ++G
Sbjct: 14 GGGAMDDDKLVFETTDGIEPITSFNDMGIKEDVLRGVYEYGFEKPSAIQQRAVMPILQGR 73
Query: 86 DVIAQAQSGTGKTATFSISILQQVDQNIKECQALILAPTRELAQQIQKVVIALGDFMSVS 145
DVIAQAQSGTGKT+ ++S+ Q VD + +E QALIL+PTRELA Q +K + A+G ++
Sbjct: 74 DVIAQAQSGTGKTSMIALSVCQVVDTSSREVQALILSPTRELATQTEKTIQAIGLHANIQ 133
Query: 146 CHACIGGTIVRDDIRKLEAGAQVVVGTPGRVFDMISRGALSTKQIRMFVLDEADEMLSRG 205
HACIGG V +DIRKLE G VV GTPGRV DMI R +L T+ I++ +LDE+DEMLSRG
Sbjct: 134 AHACIGGNSVGEDIRKLEHGVHVVSGTPGRVCDMIKRRSLRTRAIKLLILDESDEMLSRG 193
Query: 206 FKDQIYDVFKHLNNDVQVILLSATMPADVLDVSMKFMRDPIKILVKKEELTLE 258
FKDQIYDV+++L D+QV L+SAT+P ++L+++ KFM +P+KILVK++ELTLE
Sbjct: 194 FKDQIYDVYRYLPPDLQVCLVSATLPHEILEMTSKFMTEPVKILVKRDELTLE 246
>CGD|CAL0001638 [details] [associations]
symbol:FAL1 species:5476 "Candida albicans" [GO:0005730
"nucleolus" evidence=IEA] [GO:0097078 "FAl1-SGD1 complex"
evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 CGD:CAL0001638 GO:GO:0005524 GO:GO:0005730
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:AACQ01000041 EMBL:AACQ01000040 GO:GO:0006364 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 EMBL:AJ250879
RefSeq:XP_718509.1 RefSeq:XP_718592.1 ProteinModelPortal:Q5A9Z6
SMR:Q5A9Z6 GeneID:3639739 GeneID:3639839 KEGG:cal:CaO19.10024
KEGG:cal:CaO19.2488 KO:K13025 Uniprot:Q5A9Z6
Length = 399
Score = 667 (239.9 bits), Expect = 1.5e-65, P = 1.5e-65
Identities = 125/213 (58%), Positives = 167/213 (78%)
Query: 45 VAENFDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGNDVIAQAQSGTGKTATFSIS 104
V F+ M L +LL+GIYAYGFE PSAIQ RAI+ + G D IAQAQSGTGKTATFSI
Sbjct: 24 VHRTFESMNLKPDLLKGIYAYGFETPSAIQSRAIMQIISGRDTIAQAQSGTGKTATFSIG 83
Query: 105 ILQQVDQNIKECQALILAPTRELAQQIQKVVIALGDFMSVSCHACIGGTIVRDDIRKLEA 164
+L+ +D KECQALIL+PTRELA QIQ VV LGD+M++ HACIGG V +D++KL+
Sbjct: 84 MLEVIDTKSKECQALILSPTRELAIQIQNVVKHLGDYMNIHTHACIGGKNVGEDVKKLQQ 143
Query: 165 GAQVVVGTPGRVFDMISRGALSTKQIRMFVLDEADEMLSRGFKDQIYDVFKHLNNDVQVI 224
G Q+V GTPGRV D+I R L T+ I++ +LDEADE+ ++GFK+QIY+++KHL VQV+
Sbjct: 144 GQQIVSGTPGRVIDVIKRRNLQTRNIKVLILDEADELFTKGFKEQIYEIYKHLPPSVQVV 203
Query: 225 LLSATMPADVLDVSMKFMRDPIKILVKKEELTL 257
++SAT+P +VL+++ KF DP+KILVK++E++L
Sbjct: 204 VVSATLPREVLEMTSKFTTDPVKILVKRDEISL 236
>TAIR|locus:2008296 [details] [associations]
symbol:AT1G51380 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0009560
"embryo sac egg cell differentiation" evidence=RCA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0005730 EMBL:AC024261
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 EMBL:AC006085 KO:K13025
EMBL:AY058890 EMBL:AY079046 IPI:IPI00529522 PIR:H96551
RefSeq:NP_175549.1 UniGene:At.11244 ProteinModelPortal:Q9C8J1
SMR:Q9C8J1 PaxDb:Q9C8J1 PRIDE:Q9C8J1 EnsemblPlants:AT1G51380.1
GeneID:841562 KEGG:ath:AT1G51380 GeneFarm:1010 TAIR:At1g51380
InParanoid:Q9C8J1 OMA:DITNITH PhylomeDB:Q9C8J1
ProtClustDB:CLSN2912843 Genevestigator:Q9C8J1 GermOnline:AT1G51380
Uniprot:Q9C8J1
Length = 392
Score = 650 (233.9 bits), Expect = 9.7e-64, P = 9.7e-64
Identities = 117/212 (55%), Positives = 170/212 (80%)
Query: 47 ENFDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGNDVIAQAQSGTGKTATFSISIL 106
++FDDM +++++LRG+Y YG++KPS IQQRA++P ++G DVIAQAQSGTGKT+ +IS+
Sbjct: 22 KSFDDMGMNDKVLRGVYDYGYKKPSEIQQRALVPILKGRDVIAQAQSGTGKTSMIAISVC 81
Query: 107 QQVDQNIKECQALILAPTRELAQQIQKVVIALGDFMSVSCHACIGGTIVRDDIRKLEAGA 166
Q V+ + ++ Q L+L+P+RELA Q +K + A+G ++ HACIGG + +DI+KLE G
Sbjct: 82 QIVNISSRKVQVLVLSPSRELASQTEKTIQAIGAHTNIQAHACIGGKSIGEDIKKLERGV 141
Query: 167 QVVVGTPGRVFDMISRGALSTKQIRMFVLDEADEMLSRGFKDQIYDVFKHLNNDVQVILL 226
V GTPGRV+DMI RG+L TK +++ VLDE+DEMLS+G KDQIYDV++ L +D+QV L+
Sbjct: 142 HAVSGTPGRVYDMIKRGSLQTKAVKLLVLDESDEMLSKGLKDQIYDVYRALPHDIQVCLI 201
Query: 227 SATMPADVLDVSMKFMRDPIKILVKKEELTLE 258
SAT+P ++L+++ KFM DP++ILVK +ELTLE
Sbjct: 202 SATLPQEILEMTEKFMTDPVRILVKPDELTLE 233
>UNIPROTKB|J3QLN6 [details] [associations]
symbol:EIF4A1 "Eukaryotic initiation factor 4A-I"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR011545 Pfam:PF00270 PROSITE:PS00039
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
EMBL:AC016876 HGNC:HGNC:3282 ChiTaRS:EIF4A1 Ensembl:ENST00000583802
Uniprot:J3QLN6
Length = 163
Score = 639 (230.0 bits), Expect = 1.4e-62, P = 1.4e-62
Identities = 124/163 (76%), Positives = 145/163 (88%)
Query: 52 MELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGNDVIAQAQSGTGKTATFSISILQQVDQ 111
M LSE LLRGIYAYGFEKPSAIQQRAI+PC++G DVIAQAQSGTGKTATF+ISILQQ++
Sbjct: 1 MNLSESLLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSGTGKTATFAISILQQIEL 60
Query: 112 NIKECQALILAPTRELAQQIQKVVIALGDFMSVSCHACIGGTIVRDDIRKLEAGA-QVVV 170
++K QAL+LAPTRELAQQIQKVV+ALGD+M SCHACIGGT VR +++KL+ A ++V
Sbjct: 61 DLKATQALVLAPTRELAQQIQKVVMALGDYMGASCHACIGGTNVRAEVQKLQMEAPHIIV 120
Query: 171 GTPGRVFDMISRGALSTKQIRMFVLDEADEMLSRGFKDQIYDV 213
GTPGRVFDM++R LS K I+MFVLDEADEMLSRGFKDQIYD+
Sbjct: 121 GTPGRVFDMLNRRYLSPKYIKMFVLDEADEMLSRGFKDQIYDI 163
>SGD|S000002428 [details] [associations]
symbol:FAL1 "Nucleolar protein required for maturation of 18S
rRNA" species:4932 "Saccharomyces cerevisiae" [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0097078 "FAl1-SGD1 complex" evidence=IPI] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 SGD:S000002428 GO:GO:0005524
GO:GO:0005730 EMBL:BK006938 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195 EMBL:X95966
EMBL:Z49770 GeneTree:ENSGT00680000100003 GO:GO:0000462 KO:K13025
OrthoDB:EOG4HTD1W EMBL:Z74317 EMBL:AY723767 PIR:S54644
RefSeq:NP_010304.3 RefSeq:NP_010309.3 ProteinModelPortal:Q12099
SMR:Q12099 DIP:DIP-4516N IntAct:Q12099 MINT:MINT-503789
STRING:Q12099 PaxDb:Q12099 PeptideAtlas:Q12099 EnsemblFungi:YDR021W
GeneID:851584 GeneID:851590 KEGG:sce:YDR021W KEGG:sce:YDR026C
CYGD:YDR021w KO:K09424 OMA:IFGKQPF NextBio:969055
Genevestigator:Q12099 GermOnline:YDR021W GO:GO:0097078
Uniprot:Q12099
Length = 399
Score = 628 (226.1 bits), Expect = 2.1e-61, P = 2.1e-61
Identities = 124/217 (57%), Positives = 164/217 (75%)
Query: 45 VAENFDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGNDVIAQAQSGTGKTATFSIS 104
V+ F+ M L ++LLRGIY+YGFE PS+IQ RAI + G DVIAQAQSGTGKTATF+I
Sbjct: 21 VSSTFESMNLKDDLLRGIYSYGFEAPSSIQSRAITQIISGKDVIAQAQSGTGKTATFTIG 80
Query: 105 ILQQVDQNIKECQALILAPTRELAQQIQKVVIALGDFMSVSCHACIGGTIVRDDIRKLEA 164
+LQ +D K+ QALIL+PTRELA QI +VV LGD+M+V+ A GG ++DD++K++
Sbjct: 81 LLQAIDLRKKDLQALILSPTRELASQIGQVVKNLGDYMNVNAFAITGGKTLKDDLKKMQK 140
Query: 165 -GAQVVVGTPGRVFDMISRGALSTKQIRMFVLDEADEMLSR--GFKDQIYDVFKHLNNDV 221
G Q V GTPGRV DMI + L T+ ++M VLDEADE+LS GFK QIYD+F L +
Sbjct: 141 HGCQAVSGTPGRVLDMIKKQMLQTRNVQMLVLDEADELLSETLGFKQQIYDIFAKLPKNC 200
Query: 222 QVILLSATMPADVLDVSMKFMRDPIKILVKKEELTLE 258
QV+++SATM D+L+V+ KFM DP+KILVK++E++LE
Sbjct: 201 QVVVVSATMNKDILEVTRKFMNDPVKILVKRDEISLE 237
>GENEDB_PFALCIPARUM|PFD1070w [details] [associations]
symbol:PFD1070w "eukaryotic initiation factor,
putative" species:5833 "Plasmodium falciparum" [GO:0016281
"eukaryotic translation initiation factor 4F complex" evidence=ISS]
[GO:0003743 "translation initiation factor activity" evidence=ISS]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0006446 "regulation of translational initiation" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0006446 GO:GO:0016281
GO:GO:0003743 EMBL:AL844503 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 KO:K13025
OMA:EDWKFDT RefSeq:XP_001351530.1 ProteinModelPortal:Q8IFN9
SMR:Q8IFN9 EnsemblProtists:PFD1070w:mRNA GeneID:812458
KEGG:pfa:PFD1070w EuPathDB:PlasmoDB:PF3D7_0422700
ProtClustDB:CLSZ2436055 Uniprot:Q8IFN9
Length = 390
Score = 618 (222.6 bits), Expect = 2.4e-60, P = 2.4e-60
Identities = 114/214 (53%), Positives = 162/214 (75%)
Query: 45 VAENFDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGNDVIAQAQSGTGKTATFSIS 104
+ +F+++ + E LLRGIYAYGFEKPSAIQQR I P + G DVI Q+QSGTGKT F++
Sbjct: 15 ICTSFENIGIDEGLLRGIYAYGFEKPSAIQQRGIKPILNGRDVILQSQSGTGKTCVFAVG 74
Query: 105 ILQQVDQNIKECQALILAPTRELAQQIQKVVIALGDFMSVSCHACIGGTIVRDDIRKLEA 164
L V++N+ E Q +IL+PTRELA+Q QKV +AL D++ V+ + CIGG + DDI+ L
Sbjct: 75 ALNCVNRNLNETQVIILSPTRELAEQTQKVCLALADYIHVTIYCCIGGKKMSDDIKALNN 134
Query: 165 GAQVVVGTPGRVFDMISRGALSTKQIRMFVLDEADEMLSRGFKDQIYDVFKHLNNDVQVI 224
G V+ GTPGR++ M++ L K I+ V+DEADEML++GFK+Q+YD+++ L+ + Q+I
Sbjct: 135 GVHVISGTPGRIYHMLNLRHLKCKYIKQLVIDEADEMLNKGFKEQVYDIYRFLSPNTQII 194
Query: 225 LLSATMPADVLDVSMKFMRDPIKILVKKEELTLE 258
L SAT+P +VL+++ KFM P+KILVK++ELTLE
Sbjct: 195 LSSATLPQEVLEITNKFMHKPVKILVKRDELTLE 228
>UNIPROTKB|Q8IFN9 [details] [associations]
symbol:PFD1070w "Eukaryotic initiation factor, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0003743 "translation
initiation factor activity" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0006446
"regulation of translational initiation" evidence=ISS] [GO:0016281
"eukaryotic translation initiation factor 4F complex" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0006446 GO:GO:0016281
GO:GO:0003743 EMBL:AL844503 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 KO:K13025
OMA:EDWKFDT RefSeq:XP_001351530.1 ProteinModelPortal:Q8IFN9
SMR:Q8IFN9 EnsemblProtists:PFD1070w:mRNA GeneID:812458
KEGG:pfa:PFD1070w EuPathDB:PlasmoDB:PF3D7_0422700
ProtClustDB:CLSZ2436055 Uniprot:Q8IFN9
Length = 390
Score = 618 (222.6 bits), Expect = 2.4e-60, P = 2.4e-60
Identities = 114/214 (53%), Positives = 162/214 (75%)
Query: 45 VAENFDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGNDVIAQAQSGTGKTATFSIS 104
+ +F+++ + E LLRGIYAYGFEKPSAIQQR I P + G DVI Q+QSGTGKT F++
Sbjct: 15 ICTSFENIGIDEGLLRGIYAYGFEKPSAIQQRGIKPILNGRDVILQSQSGTGKTCVFAVG 74
Query: 105 ILQQVDQNIKECQALILAPTRELAQQIQKVVIALGDFMSVSCHACIGGTIVRDDIRKLEA 164
L V++N+ E Q +IL+PTRELA+Q QKV +AL D++ V+ + CIGG + DDI+ L
Sbjct: 75 ALNCVNRNLNETQVIILSPTRELAEQTQKVCLALADYIHVTIYCCIGGKKMSDDIKALNN 134
Query: 165 GAQVVVGTPGRVFDMISRGALSTKQIRMFVLDEADEMLSRGFKDQIYDVFKHLNNDVQVI 224
G V+ GTPGR++ M++ L K I+ V+DEADEML++GFK+Q+YD+++ L+ + Q+I
Sbjct: 135 GVHVISGTPGRIYHMLNLRHLKCKYIKQLVIDEADEMLNKGFKEQVYDIYRFLSPNTQII 194
Query: 225 LLSATMPADVLDVSMKFMRDPIKILVKKEELTLE 258
L SAT+P +VL+++ KFM P+KILVK++ELTLE
Sbjct: 195 LSSATLPQEVLEITNKFMHKPVKILVKRDELTLE 228
>UNIPROTKB|F1NTS2 [details] [associations]
symbol:EIF4A3 "Eukaryotic initiation factor 4A-III"
species:9031 "Gallus gallus" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000184 "nuclear-transcribed mRNA catabolic
process, nonsense-mediated decay" evidence=IEA] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0008143 "poly(A) RNA binding"
evidence=IEA] [GO:0017148 "negative regulation of translation"
evidence=IEA] [GO:0035145 "exon-exon junction complex"
evidence=IEA] [GO:0045727 "positive regulation of translation"
evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0000184 GO:GO:0017148 GO:GO:0045727 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
GO:GO:0035145 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0008143
GeneTree:ENSGT00530000062880 IPI:IPI00588271 EMBL:AADN02041229
EMBL:AADN02041230 ProteinModelPortal:F1NTS2
Ensembl:ENSGALT00000038969 OMA:KTRNGVD ArrayExpress:F1NTS2
Uniprot:F1NTS2
Length = 414
Score = 562 (202.9 bits), Expect = 2.1e-54, P = 2.1e-54
Identities = 120/215 (55%), Positives = 157/215 (73%)
Query: 45 VAENFDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGNDVIAQAQSGTGKTATFSIS 104
V FD M L E+LLRGIYAYGFEKPSAIQQRAI ++G DVIAQ+QSGTGKTATFSIS
Sbjct: 38 VTPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSIS 97
Query: 105 ILQQVDQNIKECQALILAPTRELAQQIQKVVIALGDFMSVS-CHACIGGTIVRDDIRKLE 163
+LQ +D ++E QALILAPTRELA QIQKV + + + H +G D+
Sbjct: 98 VLQCLDIQVRETQALILAPTRELAVQIQKVGTSKSLPVKMKELHKAMGSFKQEVDLPAGH 157
Query: 164 AGAQVVVGTPGRVFDMISRGALSTKQIRMFVLDEADEMLSRGFKDQIYDVFKHLNNDVQV 223
A+ + G ++ MI R +L T+ I+M VLDEADEML++GFK+QIYDV+++L QV
Sbjct: 158 EVARCISGIQLQLLYMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQV 217
Query: 224 ILLSATMPADVLDVSMKFMRDPIKILVKKEELTLE 258
+L+SAT+P ++L+++ KFM DPI+ILVK++ELTLE
Sbjct: 218 VLISATLPHEILEMTNKFMTDPIRILVKRDELTLE 252
>UNIPROTKB|E1BSE5 [details] [associations]
symbol:EIF4A3 "Eukaryotic initiation factor 4A-III"
species:9031 "Gallus gallus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00530000062880 EMBL:AADN02041229
EMBL:AADN02041230 IPI:IPI00819993 Ensembl:ENSGALT00000013903
ArrayExpress:E1BSE5 Uniprot:E1BSE5
Length = 402
Score = 557 (201.1 bits), Expect = 7.0e-54, P = 7.0e-54
Identities = 120/214 (56%), Positives = 157/214 (73%)
Query: 45 VAENFDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGNDVIAQAQSGTGKTATFSIS 104
V FD M L E+LLRGIYAYGFEKPSAIQQRAI ++G DVIAQ+QSGTGKTATFSIS
Sbjct: 37 VTPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSIS 96
Query: 105 ILQQVDQNIKECQALILAPTRELAQQIQKVVIALGDFMSVSCHACIGGTIVRDDIRKLEA 164
+LQ +D ++E QALILAPTRELA QIQK ++A G+ C T+ + +L
Sbjct: 97 VLQCLDIQVRETQALILAPTRELAVQIQKSLLATGEVPVPPPVKC---TVSSWEQCRLAC 153
Query: 165 GAQVVVGTPGRVFDMISRGALSTKQIRMFVLDEADEMLSRGFKDQIYDVFKHLNNDVQVI 224
+ + + DMI R +L T+ I+M VLDEADEML++GFK+QIYDV+++L QV+
Sbjct: 154 FLSLFI-LQSEI-DMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVV 211
Query: 225 LLSATMPADVLDVSMKFMRDPIKILVKKEELTLE 258
L+SAT+P ++L+++ KFM DPI+ILVK++ELTLE
Sbjct: 212 LISATLPHEILEMTNKFMTDPIRILVKRDELTLE 245
>WB|WBGene00018997 [details] [associations]
symbol:F57B9.3 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0019915 "lipid storage" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0008340 GO:GO:0009792
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0040011
GO:GO:0000003 GO:GO:0003676 GO:GO:0019915 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:FO081266 GO:GO:0008026
eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 HSSP:P10081 GeneTree:ENSGT00530000062880 KO:K03257
PIR:E88493 RefSeq:NP_498514.1 UniGene:Cel.32055
ProteinModelPortal:Q20935 SMR:Q20935 STRING:Q20935 PaxDb:Q20935
EnsemblMetazoa:F57B9.3 GeneID:186440 KEGG:cel:CELE_F57B9.3
UCSC:F57B9.3 CTD:186440 WormBase:F57B9.3 InParanoid:Q20935
NextBio:931850 Uniprot:Q20935
Length = 363
Score = 522 (188.8 bits), Expect = 3.6e-50, P = 3.6e-50
Identities = 112/208 (53%), Positives = 149/208 (71%)
Query: 52 MELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGNDVIAQAQSGTGKTATFSISILQQVDQ 111
MEL EELLRGIY +GFEKPSAIQ+ A+ PC G DV Q+Q+G+GKT I ILQ +D
Sbjct: 1 MELKEELLRGIYGFGFEKPSAIQKSAVAPCTTGKDVTIQSQAGSGKTVISLIDILQGIDC 60
Query: 112 NIKECQALILAPTRELAQQIQKVVIALGDFMSVSCHACIG-GTIVRDDIRKLEAGAQVVV 170
Q ++LAP R +AQ+ + + +LG ++V+ C+G T +D K+ + V++
Sbjct: 61 EDAHLQVILLAPQRGMAQRAHEQLKSLGRNLNVNA-TCLGFDTTAEND--KI---SHVLM 114
Query: 171 GTPGRVFDMISRGALSTKQIRMFVLDEADEMLSRGFKDQIYDVFKHLNNDVQVILLSATM 230
GTP D +S T +I+MFVLDEADEMLS+GFKDQIY+VF+ + DVQV+LLSATM
Sbjct: 115 GTPK---DFLSNIPSDTSRIKMFVLDEADEMLSKGFKDQIYEVFRSMPQDVQVVLLSATM 171
Query: 231 PADVLDVSMKFMRDPIKILVKKEELTLE 258
P++VLDV+ +FMRDPI+ILVKK+ELTLE
Sbjct: 172 PSEVLDVTNRFMRDPIRILVKKDELTLE 199
>UNIPROTKB|J3QKZ9 [details] [associations]
symbol:EIF4A1 "Eukaryotic initiation factor 4A-I"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR011545
Pfam:PF00270 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 EMBL:AC016876 HGNC:HGNC:3282 ChiTaRS:EIF4A1
Ensembl:ENST00000582169 Uniprot:J3QKZ9
Length = 135
Score = 515 (186.3 bits), Expect = 2.0e-49, P = 2.0e-49
Identities = 99/132 (75%), Positives = 118/132 (89%)
Query: 52 MELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGNDVIAQAQSGTGKTATFSISILQQVDQ 111
M LSE LLRGIYAYGFEKPSAIQQRAI+PC++G DVIAQAQSGTGKTATF+ISILQQ++
Sbjct: 1 MNLSESLLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSGTGKTATFAISILQQIEL 60
Query: 112 NIKECQALILAPTRELAQQIQKVVIALGDFMSVSCHACIGGTIVRDDIRKLEAGA-QVVV 170
++K QAL+LAPTRELAQQIQKVV+ALGD+M SCHACIGGT VR +++KL+ A ++V
Sbjct: 61 DLKATQALVLAPTRELAQQIQKVVMALGDYMGASCHACIGGTNVRAEVQKLQMEAPHIIV 120
Query: 171 GTPGRVFDMISR 182
GTPGRVFDM++R
Sbjct: 121 GTPGRVFDMLNR 132
>UNIPROTKB|F1LP27 [details] [associations]
symbol:Eif4a2 "Eukaryotic initiation factor 4A-II"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 RGD:1309225 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
IPI:IPI00949972 Ensembl:ENSRNOT00000066369 ArrayExpress:F1LP27
Uniprot:F1LP27
Length = 312
Score = 488 (176.8 bits), Expect = 1.4e-46, P = 1.4e-46
Identities = 97/139 (69%), Positives = 120/139 (86%)
Query: 124 TREL---AQQIQKVVIALGDFMSVSCHACIGGTIVRDDIRKLEAGA-QVVVGTPGRVFDM 179
+REL A +IQKV++ALGD+M +CHACIGGT VR++++KL+A A +VVGTPGRVFDM
Sbjct: 12 SRELYNYAFKIQKVILALGDYMGATCHACIGGTNVRNEMQKLQAEAPHIVVGTPGRVFDM 71
Query: 180 ISRGALSTKQIRMFVLDEADEMLSRGFKDQIYDVFKHLNNDVQVILLSATMPADVLDVSM 239
++R LS K I+MFVLDEADEMLSRGFKDQIY++F+ LN +QV+LLSATMP DVL+V+
Sbjct: 72 LNRRYLSPKWIKMFVLDEADEMLSRGFKDQIYEIFQKLNTSIQVVLLSATMPTDVLEVTK 131
Query: 240 KFMRDPIKILVKKEELTLE 258
KFMRDPI+ILVKKEELTLE
Sbjct: 132 KFMRDPIRILVKKEELTLE 150
>UNIPROTKB|Q9NZE6 [details] [associations]
symbol:EIF4A2 "BM-010" species:9606 "Homo sapiens"
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003743 "translation initiation factor activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:CH471052 GO:GO:0003743 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 HOGENOM:HOG000268797
HOVERGEN:HBG107989 HSSP:P10081 EMBL:AC112907 UniGene:Hs.518475
UniGene:Hs.599481 HGNC:HGNC:3284 ChiTaRS:EIF4A2 EMBL:AF208852
IPI:IPI00030296 SMR:Q9NZE6 STRING:Q9NZE6 Ensembl:ENST00000356531
UCSC:uc003fqv.3 Uniprot:Q9NZE6
Length = 312
Score = 485 (175.8 bits), Expect = 3.0e-46, P = 3.0e-46
Identities = 93/130 (71%), Positives = 115/130 (88%)
Query: 130 QIQKVVIALGDFMSVSCHACIGGTIVRDDIRKLEAGA-QVVVGTPGRVFDMISRGALSTK 188
+IQKV++ALGD+M +CHACIGGT VR++++KL+A A +VVGTPGRVFDM++R LS K
Sbjct: 21 KIQKVILALGDYMGATCHACIGGTNVRNEMQKLQAEAPHIVVGTPGRVFDMLNRRYLSPK 80
Query: 189 QIRMFVLDEADEMLSRGFKDQIYDVFKHLNNDVQVILLSATMPADVLDVSMKFMRDPIKI 248
I+MFVLDEADEMLSRGFKDQIY++F+ LN +QV+LLSATMP DVL+V+ KFMRDPI+I
Sbjct: 81 WIKMFVLDEADEMLSRGFKDQIYEIFQKLNTSIQVVLLSATMPTDVLEVTKKFMRDPIRI 140
Query: 249 LVKKEELTLE 258
LVKKEELTLE
Sbjct: 141 LVKKEELTLE 150
>UNIPROTKB|J3KSZ0 [details] [associations]
symbol:EIF4A1 "Eukaryotic initiation factor 4A-I"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 EMBL:AC016876 HGNC:HGNC:3282
ChiTaRS:EIF4A1 Ensembl:ENST00000583389 Uniprot:J3KSZ0
Length = 230
Score = 471 (170.9 bits), Expect = 9.1e-45, P = 9.1e-45
Identities = 91/126 (72%), Positives = 111/126 (88%)
Query: 134 VVIALGDFMSVSCHACIGGTIVRDDIRKLEAGA-QVVVGTPGRVFDMISRGALSTKQIRM 192
VV+ALGD+M SCHACIGGT VR +++KL+ A ++VGTPGRVFDM++R LS K I+M
Sbjct: 2 VVMALGDYMGASCHACIGGTNVRAEVQKLQMEAPHIIVGTPGRVFDMLNRRYLSPKYIKM 61
Query: 193 FVLDEADEMLSRGFKDQIYDVFKHLNNDVQVILLSATMPADVLDVSMKFMRDPIKILVKK 252
FVLDEADEMLSRGFKDQIYD+F+ LN++ QV+LLSATMP+DVL+V+ KFMRDPI+ILVKK
Sbjct: 62 FVLDEADEMLSRGFKDQIYDIFQKLNSNTQVVLLSATMPSDVLEVTKKFMRDPIRILVKK 121
Query: 253 EELTLE 258
EELTLE
Sbjct: 122 EELTLE 127
>SGD|S000002319 [details] [associations]
symbol:DHH1 "Cytoplasmic DExD/H-box helicase, stimulates mRNA
decapping" species:4932 "Saccharomyces cerevisiae" [GO:0000932
"cytoplasmic mRNA processing body" evidence=IEA;IDA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0006417 "regulation of
translation" evidence=IEA] [GO:0034063 "stress granule assembly"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0000290
"deadenylation-dependent decapping of nuclear-transcribed mRNA"
evidence=IMP] [GO:0003724 "RNA helicase activity" evidence=IGI;ISS]
[GO:0033962 "cytoplasmic mRNA processing body assembly"
evidence=IGI;IMP] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0010494 "cytoplasmic stress
granule" evidence=IDA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0051028 "mRNA transport" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0003676 "nucleic
acid binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 SGD:S000002319 GO:GO:0005524
GO:GO:0006417 GO:GO:0006397 EMBL:BK006938 GO:GO:0003723
GO:GO:0000753 GO:GO:0000932 EMBL:Z67750 GO:GO:0051028
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0010494
GO:GO:0033962 GO:GO:0034063 GO:GO:0008026 eggNOG:COG0513
GeneTree:ENSGT00530000063986 HOGENOM:HOG000268797 KO:K12614
OMA:YSHARMK GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
GO:GO:0000290 OrthoDB:EOG4QJVWF EMBL:X66057 EMBL:Z74208 PIR:S31229
RefSeq:NP_010121.1 PDB:1S2M PDBsum:1S2M ProteinModelPortal:P39517
SMR:P39517 DIP:DIP-1243N IntAct:P39517 MINT:MINT-385061
STRING:P39517 PaxDb:P39517 PeptideAtlas:P39517 EnsemblFungi:YDL160C
GeneID:851394 KEGG:sce:YDL160C CYGD:YDL160c
EvolutionaryTrace:P39517 NextBio:968552 Genevestigator:P39517
GermOnline:YDL160C Uniprot:P39517
Length = 506
Score = 443 (161.0 bits), Expect = 8.4e-42, P = 8.4e-42
Identities = 95/210 (45%), Positives = 128/210 (60%)
Query: 49 FDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGNDVIAQAQSGTGKTATFSISILQQ 108
F+D L ELL GI+ GFEKPS IQ+ AI + G D++A+A++GTGKTA F I L++
Sbjct: 48 FEDFYLKRELLMGIFEAGFEKPSPIQEEAIPVAITGRDILARAKNGTGKTAAFVIPTLEK 107
Query: 109 VDQNIKECQALILAPTRELAQQIQKVVIALGDFMSVSCHACIGGTIVRDDIRKLEAGAQV 168
V + + QALI+ PTRELA Q +VV LG +SC GGT +RDDI +L +
Sbjct: 108 VKPKLNKIQALIMVPTRELALQTSQVVRTLGKHCGISCMVTTGGTNLRDDILRLNETVHI 167
Query: 169 VVGTPGRVFDMISRGALSTKQIRMFVLDEADEMLSRGFKDQIYDVFKHLNNDVQVILLSA 228
+VGTPGRV D+ SR +F++DEAD+MLSR FK I + L Q +L SA
Sbjct: 168 LVGTPGRVLDLASRKVADLSDCSLFIMDEADKMLSRDFKTIIEQILSFLPPTHQSLLFSA 227
Query: 229 TMPADVLDVSMKFMRDPIKILVKKEELTLE 258
T P V + +K + P +I + EELTL+
Sbjct: 228 TFPLTVKEFMVKHLHKPYEINLM-EELTLK 256
>UNIPROTKB|J3KSN7 [details] [associations]
symbol:EIF4A2 "Eukaryotic initiation factor 4A-II"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR011545
Pfam:PF00270 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
EMBL:AC112907 HGNC:HGNC:3284 ChiTaRS:EIF4A2 Ensembl:ENST00000498746
Uniprot:J3KSN7
Length = 109
Score = 440 (159.9 bits), Expect = 1.7e-41, P = 1.7e-41
Identities = 84/109 (77%), Positives = 97/109 (88%)
Query: 32 MAVDGLIETNWDHVAENFDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGNDVIAQA 91
M DG+IE+NW+ + +NFDDM L E LLRGIYAYGFEKPSAIQQRAIIPC++G DVIAQA
Sbjct: 1 MDPDGVIESNWNEIVDNFDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQA 60
Query: 92 QSGTGKTATFSISILQQVDQNIKECQALILAPTRELAQQIQKVVIALGD 140
QSGTGKTATF+ISILQQ++ KE QAL+LAPTRELAQQIQKV++ALGD
Sbjct: 61 QSGTGKTATFAISILQQLEIEFKETQALVLAPTRELAQQIQKVILALGD 109
>CGD|CAL0006152 [details] [associations]
symbol:DHH1 species:5476 "Candida albicans" [GO:0010494
"cytoplasmic stress granule" evidence=IDA] [GO:0000932 "cytoplasmic
mRNA processing body" evidence=IEA] [GO:0030996 "cell cycle arrest
in response to nitrogen starvation" evidence=IEA] [GO:0034063
"stress granule assembly" evidence=IEA] [GO:0000753 "cell
morphogenesis involved in conjugation with cellular fusion"
evidence=IEA] [GO:0033962 "cytoplasmic mRNA processing body
assembly" evidence=IEA] [GO:0000290 "deadenylation-dependent
decapping of nuclear-transcribed mRNA" evidence=IEA] [GO:0031142
"induction of conjugation upon nitrogen starvation" evidence=IEA]
[GO:0003724 "RNA helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 CGD:CAL0006152 GO:GO:0005524 GO:GO:0006417
GO:GO:0006397 GO:GO:0003723 GO:GO:0000932 GO:GO:0051028
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0010494
GO:GO:0008026 EMBL:AACQ01000038 EMBL:AACQ01000037 eggNOG:COG0513
KO:K12614 InterPro:IPR014014 PROSITE:PS51195 RefSeq:XP_718704.1
RefSeq:XP_718788.1 ProteinModelPortal:Q5AAW3 SMR:Q5AAW3
GeneID:3639490 GeneID:3639628 KEGG:cal:CaO19.13577
KEGG:cal:CaO19.6197 Uniprot:Q5AAW3
Length = 549
Score = 429 (156.1 bits), Expect = 2.6e-40, P = 2.6e-40
Identities = 93/212 (43%), Positives = 130/212 (61%)
Query: 47 ENFDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGNDVIAQAQSGTGKTATFSISIL 106
++F+D L ELL GI+ GFEKPS IQ+ +I + G D++A+A++GTGKTA+F I L
Sbjct: 30 KSFEDFNLKRELLMGIFEAGFEKPSPIQEESIPMALAGRDILARAKNGTGKTASFIIPCL 89
Query: 107 QQVDQNIKECQALILAPTRELAQQIQKVVIALGDFMSVSCHACIGGTIVRDDIRKLEAGA 166
Q V + + QALIL PTRELA Q +VV LG + C GGT +RDDI +L
Sbjct: 90 QLVKPKLNKVQALILVPTRELALQTSQVVRTLGKHVGTQCMVTTGGTSLRDDIVRLHDPV 149
Query: 167 QVVVGTPGRVFDMISRGALSTKQIRMFVLDEADEMLSRGFKDQIYDVFKHLNNDVQVILL 226
++VGTPGRV D+ +R + + +FV+DEAD+MLSR FK I + + + Q +L
Sbjct: 150 HILVGTPGRVLDLAARKVVDLSECPLFVMDEADKMLSREFKGIIEQILEFFPPNRQALLF 209
Query: 227 SATMPADVLDVSMKFMRDPIKILVKKEELTLE 258
SAT P V K + P +I + +ELTL+
Sbjct: 210 SATFPLAVKSFMDKHLTKPYEINLM-DELTLK 240
>UNIPROTKB|Q5AAW3 [details] [associations]
symbol:DHH1 "ATP-dependent RNA helicase DHH1"
species:237561 "Candida albicans SC5314" [GO:0010494 "cytoplasmic
stress granule" evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 CGD:CAL0006152 GO:GO:0005524
GO:GO:0006417 GO:GO:0006397 GO:GO:0003723 GO:GO:0000932
GO:GO:0051028 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0010494 GO:GO:0008026 EMBL:AACQ01000038 EMBL:AACQ01000037
eggNOG:COG0513 KO:K12614 InterPro:IPR014014 PROSITE:PS51195
RefSeq:XP_718704.1 RefSeq:XP_718788.1 ProteinModelPortal:Q5AAW3
SMR:Q5AAW3 GeneID:3639490 GeneID:3639628 KEGG:cal:CaO19.13577
KEGG:cal:CaO19.6197 Uniprot:Q5AAW3
Length = 549
Score = 429 (156.1 bits), Expect = 2.6e-40, P = 2.6e-40
Identities = 93/212 (43%), Positives = 130/212 (61%)
Query: 47 ENFDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGNDVIAQAQSGTGKTATFSISIL 106
++F+D L ELL GI+ GFEKPS IQ+ +I + G D++A+A++GTGKTA+F I L
Sbjct: 30 KSFEDFNLKRELLMGIFEAGFEKPSPIQEESIPMALAGRDILARAKNGTGKTASFIIPCL 89
Query: 107 QQVDQNIKECQALILAPTRELAQQIQKVVIALGDFMSVSCHACIGGTIVRDDIRKLEAGA 166
Q V + + QALIL PTRELA Q +VV LG + C GGT +RDDI +L
Sbjct: 90 QLVKPKLNKVQALILVPTRELALQTSQVVRTLGKHVGTQCMVTTGGTSLRDDIVRLHDPV 149
Query: 167 QVVVGTPGRVFDMISRGALSTKQIRMFVLDEADEMLSRGFKDQIYDVFKHLNNDVQVILL 226
++VGTPGRV D+ +R + + +FV+DEAD+MLSR FK I + + + Q +L
Sbjct: 150 HILVGTPGRVLDLAARKVVDLSECPLFVMDEADKMLSREFKGIIEQILEFFPPNRQALLF 209
Query: 227 SATMPADVLDVSMKFMRDPIKILVKKEELTLE 258
SAT P V K + P +I + +ELTL+
Sbjct: 210 SATFPLAVKSFMDKHLTKPYEINLM-DELTLK 240
>TAIR|locus:2127043 [details] [associations]
symbol:RH8 "RNAhelicase-like 8" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA;ISS]
[GO:0016032 "viral reproduction" evidence=IMP] [GO:0019048
"virus-host interaction" evidence=IPI] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0019048 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006417
GO:GO:0006397 GO:GO:0003723 EMBL:AF058919 EMBL:AL161472
GO:GO:0000932 GO:GO:0051028 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
KO:K12614 InterPro:IPR014014 PROSITE:PS51195 OMA:QFMEKHL
ProtClustDB:CLSN2683443 EMBL:AJ010460 EMBL:AY080837 EMBL:AY113985
IPI:IPI00531108 PIR:T01230 PIR:T51741 RefSeq:NP_191975.2
RefSeq:NP_849535.1 UniGene:At.25593 UniGene:At.67100
UniGene:At.71300 ProteinModelPortal:Q8RXK6 SMR:Q8RXK6 STRING:Q8RXK6
PaxDb:Q8RXK6 PRIDE:Q8RXK6 EnsemblPlants:AT4G00660.1
EnsemblPlants:AT4G00660.2 GeneID:828042 KEGG:ath:AT4G00660
GeneFarm:919 TAIR:At4g00660 InParanoid:Q8RXK6 PhylomeDB:Q8RXK6
Genevestigator:Q8RXK6 GermOnline:AT4G00660 Uniprot:Q8RXK6
Length = 505
Score = 412 (150.1 bits), Expect = 1.6e-38, P = 1.6e-38
Identities = 84/210 (40%), Positives = 129/210 (61%)
Query: 49 FDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGNDVIAQAQSGTGKTATFSISILQQ 108
F+D L ELL GIY GFE+PS IQ+ +I + G D++A+A++GTGKTA F I +L++
Sbjct: 133 FEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGRDILARAKNGTGKTAAFCIPVLEK 192
Query: 109 VDQNIKECQALILAPTRELAQQIQKVVIALGDFMSVSCHACIGGTIVRDDIRKLEAGAQV 168
+DQ+ QA+I+ PTRELA Q +V LG + + GGT ++DDI +L +
Sbjct: 193 IDQDNNVIQAVIIVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQPVHL 252
Query: 169 VVGTPGRVFDMISRGALSTKQIRMFVLDEADEMLSRGFKDQIYDVFKHLNNDVQVILLSA 228
+VGTPGR+ D+ +G K + V+DEAD++LS+ F+ + + L Q+++ SA
Sbjct: 253 LVGTPGRILDLTKKGVCVLKDCSVLVMDEADKLLSQEFQPSVEHLISFLPESRQILMFSA 312
Query: 229 TMPADVLDVSMKFMRDPIKILVKKEELTLE 258
T P V D +F+ +P I + +ELTL+
Sbjct: 313 TFPVTVKDFKDRFLTNPYVINLM-DELTLK 341
>UNIPROTKB|A4R715 [details] [associations]
symbol:DHH1 "ATP-dependent RNA helicase DHH1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0006417 GO:GO:0006397 GO:GO:0003723 GO:GO:0000932
GO:GO:0051028 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:CM001234 GO:GO:0008026 eggNOG:COG0513 KO:K12614
InterPro:IPR014014 PROSITE:PS51195 RefSeq:XP_003716556.1
GeneID:2676879 KEGG:mgr:MGG_03388 OrthoDB:EOG4QJVWF Uniprot:A4R715
Length = 535
Score = 407 (148.3 bits), Expect = 5.5e-38, P = 5.5e-38
Identities = 85/209 (40%), Positives = 127/209 (60%)
Query: 49 FDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGNDVIAQAQSGTGKTATFSISILQQ 108
F++ L +LL GI+ GFEKPS IQ+ +I + G D++A+A++GTGKTA F + L+
Sbjct: 49 FENFGLKRDLLMGIFEAGFEKPSPIQEESIPVALTGRDILARAKNGTGKTAAFVVPALET 108
Query: 109 VDQNIKECQALILAPTRELAQQIQKVVIALGDFMSVSCHACIGGTIVRDDIRKLEAGAQV 168
++ + + Q LIL PTRELA Q +V LG + ++ GGT +RDDI +L+ +
Sbjct: 109 INPKVSKIQCLILVPTRELAMQTSQVCKTLGKHLGINVMVTTGGTTLRDDILRLQDPVHI 168
Query: 169 VVGTPGRVFDMISRGALSTKQIRMFVLDEADEMLSRGFKDQIYDVFKHLNNDVQVILLSA 228
VVGTPGR+ D+ + + MF++DEAD++LS F I + + D QV+L SA
Sbjct: 169 VVGTPGRILDLAGKNVADLSECPMFIMDEADKLLSIEFTPVIEQLLQFHPKDRQVMLFSA 228
Query: 229 TMPADVLDVSMKFMRDPIKILVKKEELTL 257
T P V + S K M +P +I + +ELTL
Sbjct: 229 TFPISVKEFSDKNMTNPYEINLM-DELTL 256
>TAIR|locus:2098886 [details] [associations]
symbol:AT3G61240 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0005829
"cytosol" evidence=RCA] [GO:0009165 "nucleotide biosynthetic
process" evidence=RCA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0006417 GO:GO:0006397 GO:GO:0003723
EMBL:AL137898 GO:GO:0000932 GO:GO:0051028 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
HOGENOM:HOG000268797 KO:K12614 InterPro:IPR014014 PROSITE:PS51195
EMBL:AJ010464 EMBL:AY120712 EMBL:BT000038 IPI:IPI00548726
PIR:T47916 PIR:T51743 RefSeq:NP_191683.1 RefSeq:NP_974472.1
UniGene:At.20236 ProteinModelPortal:Q9M2E0 SMR:Q9M2E0 STRING:Q9M2E0
PaxDb:Q9M2E0 PRIDE:Q9M2E0 EnsemblPlants:AT3G61240.1
EnsemblPlants:AT3G61240.2 GeneID:825296 KEGG:ath:AT3G61240
GeneFarm:928 TAIR:At3g61240 InParanoid:Q9M2E0 OMA:PLAMDQR
PhylomeDB:Q9M2E0 ProtClustDB:CLSN2683443 Genevestigator:Q9M2E0
GermOnline:AT3G61240 Uniprot:Q9M2E0
Length = 498
Score = 405 (147.6 bits), Expect = 8.9e-38, P = 8.9e-38
Identities = 83/209 (39%), Positives = 128/209 (61%)
Query: 49 FDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGNDVIAQAQSGTGKTATFSISILQQ 108
F+D L +LL+GIY GFEKPS IQ+ +I + G+D++A+A++GTGKT F I +L++
Sbjct: 126 FEDYFLKRDLLKGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTGAFCIPVLEK 185
Query: 109 VDQNIKECQALILAPTRELAQQIQKVVIALGDFMSVSCHACIGGTIVRDDIRKLEAGAQV 168
+D N QA+IL PTRELA Q +V L ++++ GGT +RDDI +L +
Sbjct: 186 IDPNNNVIQAMILVPTRELALQTSQVCKELSKYLNIQVMVTTGGTSLRDDIMRLHQPVHL 245
Query: 169 VVGTPGRVFDMISRGALSTKQIRMFVLDEADEMLSRGFKDQIYDVFKHLNNDVQVILLSA 228
+VGTPGR+ D+ +G K M V+DEAD++LS F+ + ++ + L + Q ++ SA
Sbjct: 246 LVGTPGRILDLTKKGVCVLKDCAMLVMDEADKLLSAEFQPSLEELIQFLPQNRQFLMFSA 305
Query: 229 TMPADVLDVSMKFMRDPIKILVKKEELTL 257
T P V + +R P I + ++LTL
Sbjct: 306 TFPVTVKAFKDRHLRKPYVINLM-DQLTL 333
>FB|FBgn0004419 [details] [associations]
symbol:me31B "maternal expression at 31B" species:7227
"Drosophila melanogaster" [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS;NAS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IDA] [GO:0000932 "cytoplasmic
mRNA processing body" evidence=IDA] [GO:0033962 "cytoplasmic mRNA
processing body assembly" evidence=IMP] [GO:0005875 "microtubule
associated complex" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0007095 "mitotic G2 DNA damage checkpoint"
evidence=IGI] [GO:0043186 "P granule" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005875 GO:GO:0007095 EMBL:AE014134 GO:GO:0003723
GO:GO:0000932 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0033962 GO:GO:0004004 eggNOG:COG0513
GeneTree:ENSGT00530000063986 KO:K12614 OMA:YSHARMK
InterPro:IPR014014 PROSITE:PS51195 EMBL:M59926 EMBL:AY051663
PIR:A39157 RefSeq:NP_523533.2 RefSeq:NP_723539.1 UniGene:Dm.2770
ProteinModelPortal:P23128 SMR:P23128 IntAct:P23128 MINT:MINT-769276
STRING:P23128 PaxDb:P23128 PRIDE:P23128 EnsemblMetazoa:FBtr0079975
GeneID:34364 KEGG:dme:Dmel_CG4916 CTD:34364 FlyBase:FBgn0004419
InParanoid:P23128 OrthoDB:EOG45QFVG PhylomeDB:P23128 ChiTaRS:me31B
GenomeRNAi:34364 NextBio:788139 Bgee:P23128 GermOnline:CG4916
Uniprot:P23128
Length = 459
Score = 404 (147.3 bits), Expect = 1.1e-37, P = 1.1e-37
Identities = 84/216 (38%), Positives = 129/216 (59%)
Query: 43 DHVAENFDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGNDVIAQAQSGTGKTATFS 102
D F++ L ELL GI+ G+E+PS IQ+ AI + G DV+A+A++GTGKT +
Sbjct: 54 DTRGNEFEEFCLKRELLMGIFEKGWERPSPIQEAAIPIALSGKDVLARAKNGTGKTGAYC 113
Query: 103 ISILQQVDQNIKECQALILAPTRELAQQIQKVVIALGDFMSVSCHACIGGTIVRDDIRKL 162
I +L+Q+D QAL++ PTRELA Q ++ I L + + GGTI++DDI ++
Sbjct: 114 IPVLEQIDPTKDYIQALVMVPTRELALQTSQICIELAKHLDIRVMVTTGGTILKDDILRI 173
Query: 163 EAGAQVVVGTPGRVFDMISRGALSTKQIRMFVLDEADEMLSRGFKDQIYDVFKHLNNDVQ 222
Q+++ TPGR+ D++ + R+ VLDEAD++LS F+ + V L D Q
Sbjct: 174 YQKVQLIIATPGRILDLMDKKVADMSHCRILVLDEADKLLSLDFQGMLDHVILKLPKDPQ 233
Query: 223 VILLSATMPADVLDVSMKFMRDPIKILVKKEELTLE 258
++L SAT P V + K +R+P +I + EELTL+
Sbjct: 234 ILLFSATFPLTVKNFMEKHLREPYEINLM-EELTLK 268
>CGD|CAL0000067 [details] [associations]
symbol:DBP5 species:5476 "Candida albicans" [GO:0003724 "RNA
helicase activity" evidence=IEA] [GO:0000822 "inositol
hexakisphosphate binding" evidence=IEA] [GO:0008186 "RNA-dependent
ATPase activity" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0005934 "cellular bud tip" evidence=IEA] [GO:0044614 "nuclear
pore cytoplasmic filaments" evidence=IEA] [GO:0005844 "polysome"
evidence=IEA] [GO:0006406 "mRNA export from nucleus" evidence=IEA]
[GO:0006415 "translational termination" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 CGD:CAL0000067 GO:GO:0005524 GO:GO:0005737
GO:GO:0015031 GO:GO:0031965 GO:GO:0005643 GO:GO:0003723
EMBL:AACQ01000014 EMBL:AACQ01000013 GO:GO:0051028
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
RefSeq:XP_721619.1 RefSeq:XP_721738.1 ProteinModelPortal:Q5AJD0
PRIDE:Q5AJD0 GeneID:3636564 GeneID:3636693 KEGG:cal:CaO19.1661
KEGG:cal:CaO19.9230 Uniprot:Q5AJD0
Length = 540
Score = 403 (146.9 bits), Expect = 1.5e-37, P = 1.5e-37
Identities = 90/216 (41%), Positives = 138/216 (63%)
Query: 47 ENFDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGN---DVIAQAQSGTGKTATFSI 103
++F+++ LS ELL+G+YA F KPS IQ++A+ P + N ++I Q+QSGTGKTA FS+
Sbjct: 150 KSFEELGLSPELLKGLYAMKFNKPSKIQEKAL-PLLLSNPPRNMIGQSQSGTGKTAAFSL 208
Query: 104 SILQQVDQNIKECQALILAPTRELAQQIQKVVIALGDFMSVSCHACIGGTIVRDDIRKLE 163
++L +VD IK Q L L+PTRELA+Q +V+ +G F +++ + I R
Sbjct: 209 TMLSRVDPTIKMPQCLCLSPTRELARQTLEVITTMGKFTNITTQLVVPNAIPRGS----S 264
Query: 164 AGAQVVVGTPGRVFDMISRGALSTKQIRMFVLDEADEML-SRGFKDQIYDVFKHLNNDVQ 222
AQV+VGTPG D+I R L+ ++++FVLDEAD ML ++G DQ V K L VQ
Sbjct: 265 VNAQVLVGTPGIAIDLIRRRQLNLSKMKVFVLDEADNMLEAQGLGDQAIRVKKALPRGVQ 324
Query: 223 VILLSATMPADVLDVSMKFMRDPIKILVKKEELTLE 258
++L SAT P +V + + + + D + +K+EEL ++
Sbjct: 325 LVLFSATFPTEVREYAERLVPDANSLELKQEELNVD 360
>TIGR_CMR|CPS_1726 [details] [associations]
symbol:CPS_1726 "RNA helicase DeaD" species:167879
"Colwellia psychrerythraea 34H" [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0009409 "response to cold" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:CP000083
GenomeReviews:CP000083_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268810 KO:K05592 InterPro:IPR005580
Pfam:PF03880 RefSeq:YP_268464.1 ProteinModelPortal:Q484Q1
STRING:Q484Q1 GeneID:3523325 KEGG:cps:CPS_1726 PATRIC:21466621
OMA:WIVKGVE ProtClustDB:CLSK741103
BioCyc:CPSY167879:GI48-1803-MONOMER Uniprot:Q484Q1
Length = 611
Score = 405 (147.6 bits), Expect = 1.7e-37, P = 1.7e-37
Identities = 90/227 (39%), Positives = 133/227 (58%)
Query: 35 DGLIETNWDHVAENFDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGNDVIAQAQSG 94
D ET + A F + L E LL + + GF + IQ I P + G DV+ +AQ+G
Sbjct: 3 DQKTETVTEPEAVAFASLGLPENLLSAVLSIGFTSATDIQALTIPPLLAGKDVLGEAQTG 62
Query: 95 TGKTATFSISILQQVDQNIKECQALILAPTRELAQQIQKVVIALG-DFMSVSCHACIGGT 153
TGKTA F + L ++D +IK+ Q ++LAPTRELA Q+ + + + G D + GG
Sbjct: 63 TGKTAAFGLPALAKIDTSIKKPQLMVLAPTRELAMQVAEAIESFGKDMKGLRVATLYGGQ 122
Query: 154 IVRDDIRKLEAGAQVVVGTPGRVFDMISRGALSTKQIRMFVLDEADEMLSRGFKDQIYDV 213
++LE GAQVVVGTPGR+ D + R +L ++R+ VLDEADEML+ GF + I +
Sbjct: 123 SYGPQFQQLERGAQVVVGTPGRLMDHLRRKSLKLDELRVCVLDEADEMLNMGFLEDIQWI 182
Query: 214 FKHLNNDVQVILLSATMPADVLDVSMKFMRDP--IKIL-VKKEELTL 257
H+ Q+ L SATMP + ++ +F++DP IK+ VKK + +
Sbjct: 183 LDHIPKTAQMCLFSATMPPAIRKIANRFLKDPEHIKVAAVKKAKANI 229
>UNIPROTKB|Q5L3G9 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:235909 "Geobacillus kaustophilus HTA426" [GO:0003723 "RNA
binding" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
[GO:0043590 "bacterial nucleoid" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043590 HOGENOM:HOG000268810 KO:K05592
OMA:IIDHINR HSSP:Q58083 EMBL:BA000043 RefSeq:YP_146079.1
ProteinModelPortal:Q5L3G9 GeneID:3184893 GenomeReviews:BA000043_GR
KEGG:gka:GK0226 PATRIC:21961545 ProtClustDB:CLSK712472
BioCyc:GKAU235909:GJO7-260-MONOMER Uniprot:Q5L3G9
Length = 467
Score = 402 (146.6 bits), Expect = 1.9e-37, P = 1.9e-37
Identities = 84/209 (40%), Positives = 128/209 (61%)
Query: 49 FDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGNDVIAQAQSGTGKTATFSISILQQ 108
F ++ LS+E+++ I GFE+ + IQ + I ++ DVI QAQ+GTGKTA F I I+++
Sbjct: 4 FQELGLSQEVMKAIERMGFEETTPIQAKTIPLSLQNKDVIGQAQTGTGKTAAFGIPIVEK 63
Query: 109 VDQNIKECQALILAPTRELAQQIQKVVIALGDFMSVSCHACIGGTIVRDDIRKLEAGAQV 168
V+ QAL++APTRELA Q+ + + +G V GG + IR L+ V
Sbjct: 64 VNVKNSAVQALVVAPTRELAIQVSEELYKIGAVKRVRVLPIYGGQDIERQIRALKKHPHV 123
Query: 169 VVGTPGRVFDMISRGALSTKQIRMFVLDEADEMLSRGFKDQIYDVFKHLNNDVQVILLSA 228
+VGTPGR+ D I+RG L + + VLDEADEML+ GF + I + H+ + Q +L SA
Sbjct: 124 IVGTPGRIIDHINRGTLRLEHVHTVVLDEADEMLNMGFIEDIEAILSHVPAERQTLLFSA 183
Query: 229 TMPADVLDVSMKFMRDPIKILVKKEELTL 257
TMP + ++ +FM +P + VK +E+T+
Sbjct: 184 TMPDPIRRIAERFMNEPELVKVKAKEMTV 212
>TAIR|locus:2050715 [details] [associations]
symbol:AT2G45810 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0005829
"cytosol" evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005829 GO:GO:0005524
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0006417 GO:GO:0006397
GO:GO:0003723 GO:GO:0000932 GO:GO:0051028 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AC004665 GO:GO:0008026
eggNOG:COG0513 HOGENOM:HOG000268797 KO:K12614 InterPro:IPR014014
PROSITE:PS51195 OMA:HIDPARF ProtClustDB:CLSN2683443 EMBL:AY039862
EMBL:BT002709 EMBL:AJ010459 IPI:IPI00528597 PIR:T02466 PIR:T51740
RefSeq:NP_182105.1 UniGene:At.46 ProteinModelPortal:Q94BV4
SMR:Q94BV4 IntAct:Q94BV4 STRING:Q94BV4 PaxDb:Q94BV4 PRIDE:Q94BV4
EnsemblPlants:AT2G45810.1 GeneID:819189 KEGG:ath:AT2G45810
GeneFarm:917 TAIR:At2g45810 InParanoid:Q94BV4 PhylomeDB:Q94BV4
Genevestigator:Q94BV4 GermOnline:AT2G45810 Uniprot:Q94BV4
Length = 528
Score = 401 (146.2 bits), Expect = 2.4e-37, P = 2.4e-37
Identities = 83/209 (39%), Positives = 126/209 (60%)
Query: 49 FDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGNDVIAQAQSGTGKTATFSISILQQ 108
F+D L +LLRGIY GFEKPS IQ+ +I + G+D++A+A++GTGKT F I L++
Sbjct: 156 FEDYFLKRDLLRGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTGAFCIPTLEK 215
Query: 109 VDQNIKECQALILAPTRELAQQIQKVVIALGDFMSVSCHACIGGTIVRDDIRKLEAGAQV 168
+D QA+IL PTRELA Q +V L ++ + GGT +RDDI +L +
Sbjct: 216 IDPENNVIQAVILVPTRELALQTSQVCKELSKYLKIEVMVTTGGTSLRDDIMRLYQPVHL 275
Query: 169 VVGTPGRVFDMISRGALSTKQIRMFVLDEADEMLSRGFKDQIYDVFKHLNNDVQVILLSA 228
+VGTPGR+ D+ +G K M V+DEAD++LS F+ I ++ + L Q+++ SA
Sbjct: 276 LVGTPGRILDLAKKGVCVLKDCAMLVMDEADKLLSVEFQPSIEELIQFLPESRQILMFSA 335
Query: 229 TMPADVLDVSMKFMRDPIKILVKKEELTL 257
T P V ++++ P I+ ++LTL
Sbjct: 336 TFPVTVKSFKDRYLKKPY-IINLMDQLTL 363
>POMBASE|SPBC776.09 [details] [associations]
symbol:ste13 "ATP-dependent RNA helicase Ste13"
species:4896 "Schizosaccharomyces pombe" [GO:0000290
"deadenylation-dependent decapping of nuclear-transcribed mRNA"
evidence=ISO] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=ISO] [GO:0003723 "RNA binding" evidence=IEA] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=TAS] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISO;IDA] [GO:0006417 "regulation of translation"
evidence=IEA] [GO:0030996 "cell cycle arrest in response to
nitrogen starvation" evidence=IMP] [GO:0031142 "induction of
conjugation upon nitrogen starvation" evidence=IMP] [GO:0051028
"mRNA transport" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 PomBase:SPBC776.09
GO:GO:0005524 GO:GO:0006417 EMBL:CU329671 GO:GO:0006397
GenomeReviews:CU329671_GR GO:GO:0003723 GO:GO:0000932 GO:GO:0051028
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
GO:GO:0031142 eggNOG:COG0513 HOGENOM:HOG000268797 KO:K12614
OMA:YSHARMK InterPro:IPR014014 PROSITE:PS51195 GO:GO:0000290
OrthoDB:EOG4QJVWF EMBL:D29795 PIR:S46654 RefSeq:NP_596324.1
ProteinModelPortal:Q09181 SMR:Q09181 STRING:Q09181 PRIDE:Q09181
EnsemblFungi:SPBC776.09.1 GeneID:2541216 KEGG:spo:SPBC776.09
NextBio:20802328 GO:GO:0030996 Uniprot:Q09181
Length = 485
Score = 397 (144.8 bits), Expect = 6.3e-37, P = 6.3e-37
Identities = 89/209 (42%), Positives = 123/209 (58%)
Query: 49 FDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGNDVIAQAQSGTGKTATFSISILQQ 108
F+D L ELL GI+ GFE+PS IQ+ +I + G D++A+A++GTGKTA F I L++
Sbjct: 46 FEDYYLKRELLMGIFEAGFERPSPIQEESIPIALSGRDILARAKNGTGKTAAFVIPSLEK 105
Query: 109 VDQNIKECQALILAPTRELAQQIQKVVIALGDFMSVSCHACIGGTIVRDDIRKLEAGAQV 168
VD + Q LIL PTRELA Q +V LG M+V GGT +RDDI +L +
Sbjct: 106 VDTKKSKIQTLILVPTRELALQTSQVCKTLGKHMNVKVMVTTGGTTLRDDIIRLNDTVHI 165
Query: 169 VVGTPGRVFDMISRGALSTKQIRMFVLDEADEMLSRGFKDQIYDVFKHLNNDVQVILLSA 228
VVGTPGRV D+ +G + FV+DEAD++LS F I + + + Q+ L SA
Sbjct: 166 VVGTPGRVLDLAGKGVADFSECTTFVMDEADKLLSPEFTPIIEQLLSYFPKNRQISLYSA 225
Query: 229 TMPADVLDVSMKFMRDPIKILVKKEELTL 257
T P V + K + P +I + +ELTL
Sbjct: 226 TFPLIVKNFMDKHLNKPYEINLM-DELTL 253
>ASPGD|ASPL0000036135 [details] [associations]
symbol:AN10417 species:162425 "Emericella nidulans"
[GO:0010494 "cytoplasmic stress granule" evidence=IEA] [GO:0000932
"cytoplasmic mRNA processing body" evidence=IEA] [GO:0003724 "RNA
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0030996 "cell
cycle arrest in response to nitrogen starvation" evidence=IEA]
[GO:0034063 "stress granule assembly" evidence=IEA] [GO:0033962
"cytoplasmic mRNA processing body assembly" evidence=IEA]
[GO:0000290 "deadenylation-dependent decapping of
nuclear-transcribed mRNA" evidence=IEA] [GO:0031142 "induction of
conjugation upon nitrogen starvation" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:BN001306 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195 OMA:HIDPARF
EnsemblFungi:CADANIAT00009573 Uniprot:C8VHA5
Length = 498
Score = 396 (144.5 bits), Expect = 8.0e-37, P = 8.0e-37
Identities = 87/209 (41%), Positives = 123/209 (58%)
Query: 49 FDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGNDVIAQAQSGTGKTATFSISILQQ 108
F+D + EL+ GI+ GFEKPS IQ+ I + G D++A+A++GTGKTA F I L++
Sbjct: 41 FEDFYIKRELMMGIFEAGFEKPSPIQEETIPVALTGRDILARAKNGTGKTAAFVIPTLER 100
Query: 109 VDQNIKECQALILAPTRELAQQIQKVVIALGDFMSVSCHACIGGTIVRDDIRKLEAGAQV 168
++ + QALIL PTRELA Q V LG + ++ GGT + DDI +L +
Sbjct: 101 INPKSTKTQALILVPTRELALQTSHVCKTLGKHLGINVMVTTGGTGLMDDIIRLNDAVHI 160
Query: 169 VVGTPGRVFDMISRGALSTKQIRMFVLDEADEMLSRGFKDQIYDVFKHLNNDVQVILLSA 228
+VGTPGRV D+ S+G + FV+DEAD++LS F I + D QV+L SA
Sbjct: 161 LVGTPGRVLDLASKGVADLSECPTFVMDEADKLLSPEFTPVIEQLLSFHPKDRQVMLFSA 220
Query: 229 TMPADVLDVSMKFMRDPIKILVKKEELTL 257
T P V + MR+P +I + +ELTL
Sbjct: 221 TFPMIVKSFKDRHMRNPYEINLM-DELTL 248
>UNIPROTKB|B4E102 [details] [associations]
symbol:EIF4A1 "cDNA FLJ57766, moderately similar to
Eukaryotic initiation factor 4A-I (EC 3.6.1.-)" species:9606 "Homo
sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003743
"translation initiation factor activity" evidence=IEA]
InterPro:IPR011545 Pfam:PF00270 GO:GO:0005524 GO:GO:0003743
InterPro:IPR014001 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 EMBL:AC016876 UniGene:Hs.129673 HGNC:HGNC:3282
ChiTaRS:EIF4A1 EMBL:AK303599 IPI:IPI00910691 SMR:B4E102
STRING:B4E102 Ensembl:ENST00000380512 HOVERGEN:HBG104017
Uniprot:B4E102
Length = 146
Score = 395 (144.1 bits), Expect = 1.0e-36, P = 1.0e-36
Identities = 73/101 (72%), Positives = 91/101 (90%)
Query: 32 MAVDGLIETNWDHVAENFDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGNDVIAQA 91
M +G+IE+NW+ + ++FDDM LSE LLRGIYAYGFEKPSAIQQRAI+PC++G DVIAQA
Sbjct: 1 MEPEGVIESNWNEIVDSFDDMNLSESLLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQA 60
Query: 92 QSGTGKTATFSISILQQVDQNIKECQALILAPTRELAQQIQ 132
QSGTGKTATF+ISILQQ++ ++K QAL+LAPTRELAQQ++
Sbjct: 61 QSGTGKTATFAISILQQIELDLKATQALVLAPTRELAQQVR 101
>UNIPROTKB|P54824 [details] [associations]
symbol:ddx6 "ATP-dependent RNA helicase ddx6" species:8355
"Xenopus laevis" [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0030529 "ribonucleoprotein complex" evidence=IPI]
[GO:0005654 "nucleoplasm" evidence=IDA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0007275
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0003723
GO:GO:0030529 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 KO:K12614 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG106685 CTD:1656 EMBL:X92421 EMBL:BC170228 EMBL:BC170230
RefSeq:NP_001083721.1 UniGene:Xl.157 IntAct:P54824 PRIDE:P54824
GeneID:399080 KEGG:xla:399080 Xenbase:XB-GENE-922237 Uniprot:P54824
Length = 481
Score = 395 (144.1 bits), Expect = 1.0e-36, P = 1.0e-36
Identities = 85/212 (40%), Positives = 131/212 (61%)
Query: 49 FDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGNDVIAQAQSGTGKTATFSISILQQ 108
F+D L ELL GI+ G+EKPS IQ+ +I + G D++A+A++GTGK+ + I +L++
Sbjct: 97 FEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLER 156
Query: 109 VDQNIKEC-QALILAPTRELAQQIQKVVIALGDFMS-VSCHACIGGTIVRDDIRKLEAGA 166
+D K+C QA+++ PTRELA Q+ ++ I + M A GGT +RDDI +L+
Sbjct: 157 LDLK-KDCIQAMVIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNLRDDIMRLDDTV 215
Query: 167 QVVVGTPGRVFDMISRGALSTKQIRMFVLDEADEMLSRGFKDQIYDVFKHLNNDVQVILL 226
VV+ TPGR+ D+I +G I+M VLDEAD++LS+ F + D+ L + Q++L
Sbjct: 216 HVVIATPGRILDLIKKGVAKVDHIQMIVLDEADKLLSQDFMQIMEDIIMTLPKNRQILLY 275
Query: 227 SATMPADVLDVSMKFMRDPIKILVKKEELTLE 258
SAT P V ++ P +I + EELTL+
Sbjct: 276 SATFPLSVQKFMTLHLQKPYEINLM-EELTLK 306
>ZFIN|ZDB-GENE-070912-83 [details] [associations]
symbol:ddx6 "DEAD (Asp-Glu-Ala-Asp) box polypeptide
6" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-070912-83 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GeneTree:ENSGT00530000063986 InterPro:IPR014014 PROSITE:PS51195
EMBL:CR759774 IPI:IPI00505165 ProteinModelPortal:E7FD91
Ensembl:ENSDART00000087382 Bgee:E7FD91 Uniprot:E7FD91
Length = 485
Score = 395 (144.1 bits), Expect = 1.0e-36, P = 1.0e-36
Identities = 83/212 (39%), Positives = 130/212 (61%)
Query: 49 FDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGNDVIAQAQSGTGKTATFSISILQQ 108
F+D L ELL GI+ G+EKPS IQ+ +I + G D++A+A++GTGK+ + I +L++
Sbjct: 99 FEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLER 158
Query: 109 VDQNIKECQA-LILAPTRELAQQIQKVVIALGDFMS-VSCHACIGGTIVRDDIRKLEAGA 166
+D QA +++ PTRELA Q+ ++ I + M V A GGT +RDDI +L+
Sbjct: 159 IDLKKDSIQAAVVIVPTRELALQVSQICIQVSKHMGGVKVMATTGGTNLRDDIMRLDETV 218
Query: 167 QVVVGTPGRVFDMISRGALSTKQIRMFVLDEADEMLSRGFKDQIYDVFKHLNNDVQVILL 226
VV+ TPGR+ D+I +G Q++M VLDEAD++LS+ F + ++ L+ Q++L
Sbjct: 219 HVVIATPGRILDLIKKGVAKVGQVQMIVLDEADKLLSQDFVQMMEEILSSLSKQRQILLY 278
Query: 227 SATMPADVLDVSMKFMRDPIKILVKKEELTLE 258
SAT P V ++ P +I + EELTL+
Sbjct: 279 SATFPLSVQKFMNSHLQKPYEINLM-EELTLK 309
>DICTYBASE|DDB_G0291804 [details] [associations]
symbol:ddx6 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
dictyBase:DDB_G0291804 GO:GO:0005524 GO:GO:0005737
GenomeReviews:CM000155_GR GO:GO:0006397 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 KO:K12614 InterPro:IPR014014 PROSITE:PS51195
EMBL:AAFI02000185 RefSeq:XP_629938.1 HSSP:P39517
ProteinModelPortal:Q54E49 SMR:Q54E49 PRIDE:Q54E49
EnsemblProtists:DDB0234196 GeneID:8628344 KEGG:ddi:DDB_G0291804
OMA:QFMEKHL ProtClustDB:CLSZ2429504 Uniprot:Q54E49
Length = 423
Score = 394 (143.8 bits), Expect = 1.3e-36, P = 1.3e-36
Identities = 83/211 (39%), Positives = 126/211 (59%)
Query: 48 NFDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGNDVIAQAQSGTGKTATFSISILQ 107
+FDD+ L +LLRGI+ G+ KPS IQ++AI + G D++A+A++GTGKTA+F I L+
Sbjct: 50 DFDDLHLKRDLLRGIFEKGYVKPSPIQEKAIPIALAGRDIMARAKNGTGKTASFLIPALE 109
Query: 108 QVDQNIKECQALILAPTRELAQQIQKVVIALGDFMSVSCHACIGGTIVRDDIRKLEAGAQ 167
+ D Q LIL PTRELA Q +V LG +M+V A GGT ++DDI +L
Sbjct: 110 KTDPTKDVIQVLILVPTRELALQTSQVCKELGKYMNVQVMASTGGTSLKDDIMRLYNPVH 169
Query: 168 VVVGTPGRVFDMISRGALSTKQIRMFVLDEADEMLSRGFKDQIYDVFKHLNNDVQVILLS 227
++V TPGRV D+ + + ++DEAD++LS+ F+ + + L Q++L S
Sbjct: 170 ILVATPGRVLDLAQKNVANLSNCHTMIMDEADKLLSQEFQPLVEQLINFLPQQRQILLFS 229
Query: 228 ATMPADVLDVSMKFMRDPIKILVKKEELTLE 258
AT P V +++ +I + EELTL+
Sbjct: 230 ATFPVTVKSFKEHYLQQAFEINLM-EELTLK 259
>ASPGD|ASPL0000065093 [details] [associations]
symbol:AN7659 species:162425 "Emericella nidulans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0005934 "cellular bud tip" evidence=IEA] [GO:0044614 "nuclear
pore cytoplasmic filaments" evidence=IEA] [GO:0005844 "polysome"
evidence=IEA] [GO:0003724 "RNA helicase activity" evidence=IEA]
[GO:0000822 "inositol hexakisphosphate binding" evidence=IEA]
[GO:0008186 "RNA-dependent ATPase activity" evidence=IEA]
[GO:0006406 "mRNA export from nucleus" evidence=IEA] [GO:0006415
"translational termination" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0015031 GO:GO:0031965 GO:GO:0005643
GO:GO:0003723 EMBL:BN001304 EMBL:AACD01000130 GO:GO:0051028
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 RefSeq:XP_680928.1 ProteinModelPortal:Q5AVM1
EnsemblFungi:CADANIAT00000783 GeneID:2869488 KEGG:ani:AN7659.2
OMA:PQAICLA OrthoDB:EOG4B2X5R Uniprot:Q5AVM1
Length = 477
Score = 393 (143.4 bits), Expect = 1.7e-36, P = 1.7e-36
Identities = 104/258 (40%), Positives = 148/258 (57%)
Query: 14 NGPAENEA----EQPAYNGPPGMAVDGLIETNWDHVAENFDDMELSEELLRGIYAYGFEK 69
+G A N+ +P YN ++ N + +NF+D+ L +L+G+ A F K
Sbjct: 32 DGAASNQGGSDLAEPEYNVEVKLSDLQADPNNPLYSVKNFEDLGLDPRILQGLSAMNFRK 91
Query: 70 PSAIQQRAIIPCVRGN---DVIAQAQSGTGKTATFSISILQQVD----QNIKECQALILA 122
PS IQ+RA+ P + GN +++ Q+QSGTGKTA F ++IL ++D Q K QALILA
Sbjct: 92 PSKIQERAL-PLLMGNPPKNLVGQSQSGTGKTAAFVLNILSRLDLSSEQAQKTPQALILA 150
Query: 123 PTRELAQQIQKVVIALGDFMSVSCHACIGGTIVRD-DIRKLEAGAQVVVGTPGRVFDMIS 181
PTRELA+QI V+ +G F+ H IG + D + R A VVVGTPG V DMI
Sbjct: 151 PTRELARQIVGVIQVMGKFLD-GLH--IGTAVPADTNARPTRMEASVVVGTPGTVMDMIK 207
Query: 182 RGALSTKQIRMFVLDEADEMLSR-GFKDQIYDVFKHLNNDVQVILLSATMPADVLDVSMK 240
+ + ++++ VLDEAD ML + G DQ V L D+QV+L SAT PA V + K
Sbjct: 208 KRIMVAAKLKVIVLDEADNMLDQQGLGDQCIRVKALLPRDIQVVLFSATFPAHVHQYASK 267
Query: 241 FMRDPIKILVKKEELTLE 258
F ++ ++ EELT+E
Sbjct: 268 FAPAANELTLQHEELTVE 285
>UNIPROTKB|Q5ZKB9 [details] [associations]
symbol:DDX6 "Probable ATP-dependent RNA helicase DDX6"
species:9031 "Gallus gallus" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000932 "cytoplasmic
mRNA processing body" evidence=IEA] [GO:0010494 "cytoplasmic stress
granule" evidence=IEA] [GO:0016442 "RNA-induced silencing complex"
evidence=IEA] [GO:0033962 "cytoplasmic mRNA processing body
assembly" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003723
GO:GO:0000932 GO:GO:0016442 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0010494 GO:GO:0033962 GO:GO:0008026
eggNOG:COG0513 GeneTree:ENSGT00530000063986 HOGENOM:HOG000268797
OMA:YSHARMK InterPro:IPR014014 PROSITE:PS51195 HSSP:P26196
EMBL:AJ720165 IPI:IPI00595692 UniGene:Gga.2331
ProteinModelPortal:Q5ZKB9 SMR:Q5ZKB9 Ensembl:ENSGALT00000012405
HOVERGEN:HBG106685 InParanoid:Q5ZKB9 OrthoDB:EOG4J1182
ArrayExpress:Q5ZKB9 Uniprot:Q5ZKB9
Length = 483
Score = 392 (143.0 bits), Expect = 2.1e-36, P = 2.1e-36
Identities = 82/211 (38%), Positives = 129/211 (61%)
Query: 49 FDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGNDVIAQAQSGTGKTATFSISILQQ 108
F+D L ELL GI+ G+EKPS IQ+ +I + G D++A+A++GTGK+ + I +L++
Sbjct: 98 FEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLER 157
Query: 109 VDQNIKECQALILAPTRELAQQIQKVVIALGDFMS-VSCHACIGGTIVRDDIRKLEAGAQ 167
+D QA+++ PTRELA Q+ ++ I + M A GGT +RDDI +L+
Sbjct: 158 LDLKKDNIQAMVIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNLRDDIMRLDDTVH 217
Query: 168 VVVGTPGRVFDMISRGALSTKQIRMFVLDEADEMLSRGFKDQIYDVFKHLNNDVQVILLS 227
VV+ TPGR+ D+I +G + ++M VLDEAD++LS+ F + D+ L + Q++L S
Sbjct: 218 VVIATPGRILDLIKKGVAKVEHVQMIVLDEADKLLSQDFVQIMEDIILTLPKNRQILLYS 277
Query: 228 ATMPADVLDVSMKFMRDPIKILVKKEELTLE 258
AT P V ++ P +I + EELTL+
Sbjct: 278 ATFPLSVQKFMNSHLQKPYEINLM-EELTLK 307
>POMBASE|SPBC12C2.06 [details] [associations]
symbol:SPBC12C2.06 "cytoplasmic ATP-dependent RNA
helicase Dbp5 (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0002184 "cytoplasmic translational termination" evidence=NAS]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=IC] [GO:0005635 "nuclear envelope" evidence=IDA]
[GO:0005643 "nuclear pore" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005829 "cytosol" evidence=IDA] [GO:0006406 "mRNA
export from nucleus" evidence=ISO] [GO:0006415 "translational
termination" evidence=ISO] [GO:0015031 "protein transport"
evidence=IEA] [GO:0031965 "nuclear membrane" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 PomBase:SPBC12C2.06 GO:GO:0005829 GO:GO:0005524
GO:GO:0005635 GO:GO:0015031 EMBL:CU329671 GO:GO:0031965
GO:GO:0005643 GenomeReviews:CU329671_GR GO:GO:0003723 GO:GO:0006406
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 KO:K01529
GO:GO:0004004 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 OMA:PQAICLA OrthoDB:EOG4B2X5R
PIR:T39375 RefSeq:NP_596016.1 PDB:3FHO PDBsum:3FHO
ProteinModelPortal:Q09747 STRING:Q09747 PRIDE:Q09747
EnsemblFungi:SPBC12C2.06.1 GeneID:2539975 KEGG:spo:SPBC12C2.06
EvolutionaryTrace:Q09747 NextBio:20801118 GO:GO:0002184
Uniprot:Q09747
Length = 503
Score = 391 (142.7 bits), Expect = 2.7e-36, P = 2.7e-36
Identities = 90/218 (41%), Positives = 141/218 (64%)
Query: 47 ENFDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGN---DVIAQAQSGTGKTATFSI 103
++F+++EL ELL+GIY+ F+KPS IQ++A+ P + N ++I Q+QSGTGKTA F++
Sbjct: 114 KSFEELELKPELLKGIYSMKFQKPSKIQEKAL-PLLLSNPPRNMIGQSQSGTGKTAAFAL 172
Query: 104 SILQQVDQNIKECQALILAPTRELAQQIQKVVIALGDFMSVSCHACIGGTIVRDDIRK-L 162
++L +VD ++ + QA+ LAP+RELA+QI VV +G + V G ++D + K
Sbjct: 173 TMLSRVDASVPKPQAICLAPSRELARQIMDVVTEMGKYTEVK--TAFG---IKDSVPKGA 227
Query: 163 EAGAQVVVGTPGRVFDMISRGALSTKQIRMFVLDEADEMLSR-GFKDQIYDVFKHL-NND 220
+ AQ+V+GTPG V D++ R L + I++FVLDEAD ML + G DQ + KHL +
Sbjct: 228 KIDAQIVIGTPGTVMDLMKRRQLDARDIKVFVLDEADNMLDQQGLGDQSMRI-KHLLPRN 286
Query: 221 VQVILLSATMPADVLDVSMKFMRDPIKILVKKEELTLE 258
Q++L SAT V + +F + +I +K EEL++E
Sbjct: 287 TQIVLFSATFSERVEKYAERFAPNANEIRLKTEELSVE 324
>ZFIN|ZDB-GENE-030131-6611 [details] [associations]
symbol:wu:fk48d07 "wu:fk48d07" species:7955 "Danio
rerio" [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-030131-6611 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GeneTree:ENSGT00530000063986 KO:K12614 InterPro:IPR014014
PROSITE:PS51195 OMA:HIDPARF EMBL:CR391937 IPI:IPI00901625
RefSeq:XP_001340860.1 UniGene:Dr.104819 UniGene:Dr.127773
Ensembl:ENSDART00000114495 GeneID:100007313 KEGG:dre:100007313
NextBio:20787456 Uniprot:E7F1G8
Length = 483
Score = 391 (142.7 bits), Expect = 2.7e-36, P = 2.7e-36
Identities = 81/211 (38%), Positives = 130/211 (61%)
Query: 49 FDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGNDVIAQAQSGTGKTATFSISILQQ 108
F+D L ELL GI+ G+EKPS IQ+ +I + G D++A+A++GTGK+ + I +L++
Sbjct: 90 FEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLER 149
Query: 109 VDQNIKECQALILAPTRELAQQIQKVVIALGDFMS-VSCHACIGGTIVRDDIRKLEAGAQ 167
+D QA++L PTRELA Q+ ++ I + + + A GGT +RDDI +L+
Sbjct: 150 IDLKKDYIQAIVLVPTRELALQVSQISINMSKHLGGIKVMATTGGTNLRDDIMRLDEIVH 209
Query: 168 VVVGTPGRVFDMISRGALSTKQIRMFVLDEADEMLSRGFKDQIYDVFKHLNNDVQVILLS 227
V++ TPGR+ D+I +G +++M V+DEAD++LS+ F I D+ L Q++L S
Sbjct: 210 VIIATPGRILDLIKKGVAKVDKVQMAVMDEADKLLSQDFVVLIEDIISFLPKKRQILLYS 269
Query: 228 ATMPADVLDVSMKFMRDPIKILVKKEELTLE 258
AT P V K ++ P +I + +ELTL+
Sbjct: 270 ATFPISVQKFMTKHLQKPYEINLM-DELTLK 299
>UNIPROTKB|E1BDM8 [details] [associations]
symbol:DDX6 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0033962 "cytoplasmic mRNA processing body assembly"
evidence=IEA] [GO:0016442 "RNA-induced silencing complex"
evidence=IEA] [GO:0010494 "cytoplasmic stress granule"
evidence=IEA] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0000932 GO:GO:0016442 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0010494 GO:GO:0033962
GO:GO:0008026 GeneTree:ENSGT00530000063986 KO:K12614 OMA:YSHARMK
InterPro:IPR014014 PROSITE:PS51195 CTD:1656 EMBL:DAAA02040478
EMBL:DAAA02040479 IPI:IPI00697295 RefSeq:NP_001137339.1
UniGene:Bt.12357 PRIDE:E1BDM8 Ensembl:ENSBTAT00000011952
GeneID:513906 KEGG:bta:513906 NextBio:20871085 Uniprot:E1BDM8
Length = 483
Score = 390 (142.3 bits), Expect = 3.5e-36, P = 3.5e-36
Identities = 82/211 (38%), Positives = 128/211 (60%)
Query: 49 FDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGNDVIAQAQSGTGKTATFSISILQQ 108
F+D L ELL GI+ G+EKPS IQ+ +I + G D++A+A++GTGK+ + I +L++
Sbjct: 98 FEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLER 157
Query: 109 VDQNIKECQALILAPTRELAQQIQKVVIALGDFMS-VSCHACIGGTIVRDDIRKLEAGAQ 167
+D QA+++ PTRELA Q+ ++ I + M A GGT +RDDI +L+
Sbjct: 158 LDLKKDNIQAMVIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNLRDDIMRLDDTVH 217
Query: 168 VVVGTPGRVFDMISRGALSTKQIRMFVLDEADEMLSRGFKDQIYDVFKHLNNDVQVILLS 227
VV+ TPGR+ D+I +G ++M VLDEAD++LS+ F + D+ L + Q++L S
Sbjct: 218 VVIATPGRILDLIKKGVAKVDHVQMIVLDEADKLLSQDFVQIMEDIILTLPKNRQILLYS 277
Query: 228 ATMPADVLDVSMKFMRDPIKILVKKEELTLE 258
AT P V ++ P +I + EELTL+
Sbjct: 278 ATFPLSVQKFMNSHLQKPYEINLM-EELTLK 307
>UNIPROTKB|E2RR01 [details] [associations]
symbol:DDX6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0033962 "cytoplasmic mRNA processing body
assembly" evidence=IEA] [GO:0016442 "RNA-induced silencing complex"
evidence=IEA] [GO:0010494 "cytoplasmic stress granule"
evidence=IEA] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0000932 GO:GO:0016442 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0010494 GO:GO:0033962
GO:GO:0008026 GeneTree:ENSGT00530000063986 KO:K12614 OMA:YSHARMK
InterPro:IPR014014 PROSITE:PS51195 CTD:1656 EMBL:AAEX03003444
RefSeq:XP_849975.1 Ensembl:ENSCAFT00000019743 GeneID:479414
KEGG:cfa:479414 NextBio:20854600 Uniprot:E2RR01
Length = 483
Score = 390 (142.3 bits), Expect = 3.5e-36, P = 3.5e-36
Identities = 82/211 (38%), Positives = 128/211 (60%)
Query: 49 FDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGNDVIAQAQSGTGKTATFSISILQQ 108
F+D L ELL GI+ G+EKPS IQ+ +I + G D++A+A++GTGK+ + I +L++
Sbjct: 98 FEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLER 157
Query: 109 VDQNIKECQALILAPTRELAQQIQKVVIALGDFMS-VSCHACIGGTIVRDDIRKLEAGAQ 167
+D QA+++ PTRELA Q+ ++ I + M A GGT +RDDI +L+
Sbjct: 158 LDLKKDNIQAMVIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNLRDDIMRLDDTVH 217
Query: 168 VVVGTPGRVFDMISRGALSTKQIRMFVLDEADEMLSRGFKDQIYDVFKHLNNDVQVILLS 227
VV+ TPGR+ D+I +G ++M VLDEAD++LS+ F + D+ L + Q++L S
Sbjct: 218 VVIATPGRILDLIKKGVAKVDHVQMIVLDEADKLLSQDFVQIMEDIILTLPKNRQILLYS 277
Query: 228 ATMPADVLDVSMKFMRDPIKILVKKEELTLE 258
AT P V ++ P +I + EELTL+
Sbjct: 278 ATFPLSVQKFMNSHLQKPYEINLM-EELTLK 307
>UNIPROTKB|P26196 [details] [associations]
symbol:DDX6 "Probable ATP-dependent RNA helicase DDX6"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0010494 "cytoplasmic stress granule"
evidence=IDA] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IDA] [GO:0004386 "helicase activity" evidence=TAS]
[GO:0003724 "RNA helicase activity" evidence=TAS] [GO:0016442
"RNA-induced silencing complex" evidence=IDA] [GO:0033962
"cytoplasmic mRNA processing body assembly" evidence=IDA]
[GO:0000288 "nuclear-transcribed mRNA catabolic process,
deadenylation-dependent decay" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0016070 "RNA metabolic process" evidence=TAS] [GO:0016071 "mRNA
metabolic process" evidence=TAS] [GO:0043928 "exonucleolytic
nuclear-transcribed mRNA catabolic process involved in
deadenylation-dependent decay" evidence=TAS] Reactome:REACT_71
Reactome:REACT_21257 InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005829 GO:GO:0005524
GO:GO:0010467 GO:GO:0003723 GO:GO:0000932 GO:GO:0016442
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0010494
GO:GO:0033962 GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
KO:K12614 OMA:YSHARMK GO:GO:0003724 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043928 HOVERGEN:HBG106685 OrthoDB:EOG4J1182
EMBL:Z11685 EMBL:BC065007 EMBL:D17532 IPI:IPI00030320 PIR:S22651
RefSeq:NP_001244120.1 RefSeq:NP_004388.2 UniGene:Hs.408461 PDB:1VEC
PDB:2WAX PDB:2WAY PDBsum:1VEC PDBsum:2WAX PDBsum:2WAY
ProteinModelPortal:P26196 SMR:P26196 DIP:DIP-29195N IntAct:P26196
STRING:P26196 PhosphoSite:P26196 DMDM:116241327
DOSAC-COBS-2DPAGE:P26196 PaxDb:P26196 PeptideAtlas:P26196
PRIDE:P26196 DNASU:1656 Ensembl:ENST00000264018
Ensembl:ENST00000526070 Ensembl:ENST00000534980 GeneID:1656
KEGG:hsa:1656 UCSC:uc001pub.2 CTD:1656 GeneCards:GC11M118654
HGNC:HGNC:2747 HPA:CAB004668 HPA:HPA024201 HPA:HPA026644 MIM:600326
neXtProt:NX_P26196 PharmGKB:PA27229 InParanoid:P26196
PhylomeDB:P26196 ChiTaRS:DDX6 EvolutionaryTrace:P26196
GenomeRNAi:1656 NextBio:6820 ArrayExpress:P26196 Bgee:P26196
CleanEx:HS_DDX6 Genevestigator:P26196 GermOnline:ENSG00000110367
Uniprot:P26196
Length = 483
Score = 390 (142.3 bits), Expect = 3.5e-36, P = 3.5e-36
Identities = 82/211 (38%), Positives = 128/211 (60%)
Query: 49 FDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGNDVIAQAQSGTGKTATFSISILQQ 108
F+D L ELL GI+ G+EKPS IQ+ +I + G D++A+A++GTGK+ + I +L++
Sbjct: 98 FEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLER 157
Query: 109 VDQNIKECQALILAPTRELAQQIQKVVIALGDFMS-VSCHACIGGTIVRDDIRKLEAGAQ 167
+D QA+++ PTRELA Q+ ++ I + M A GGT +RDDI +L+
Sbjct: 158 LDLKKDNIQAMVIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNLRDDIMRLDDTVH 217
Query: 168 VVVGTPGRVFDMISRGALSTKQIRMFVLDEADEMLSRGFKDQIYDVFKHLNNDVQVILLS 227
VV+ TPGR+ D+I +G ++M VLDEAD++LS+ F + D+ L + Q++L S
Sbjct: 218 VVIATPGRILDLIKKGVAKVDHVQMIVLDEADKLLSQDFVQIMEDIILTLPKNRQILLYS 277
Query: 228 ATMPADVLDVSMKFMRDPIKILVKKEELTLE 258
AT P V ++ P +I + EELTL+
Sbjct: 278 ATFPLSVQKFMNSHLQKPYEINLM-EELTLK 307
>UNIPROTKB|F1SAJ5 [details] [associations]
symbol:DDX6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0033962 "cytoplasmic mRNA processing body assembly"
evidence=IEA] [GO:0016442 "RNA-induced silencing complex"
evidence=IEA] [GO:0010494 "cytoplasmic stress granule"
evidence=IEA] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0000932 GO:GO:0016442 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0010494 GO:GO:0033962
GO:GO:0008026 GeneTree:ENSGT00530000063986 KO:K12614 OMA:YSHARMK
InterPro:IPR014014 PROSITE:PS51195 CTD:1656 EMBL:FP089499
RefSeq:XP_003129962.1 RefSeq:XP_003357372.1 UniGene:Ssc.97711
Ensembl:ENSSSCT00000016463 GeneID:100515499 KEGG:ssc:100515499
Uniprot:F1SAJ5
Length = 483
Score = 390 (142.3 bits), Expect = 3.5e-36, P = 3.5e-36
Identities = 82/211 (38%), Positives = 128/211 (60%)
Query: 49 FDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGNDVIAQAQSGTGKTATFSISILQQ 108
F+D L ELL GI+ G+EKPS IQ+ +I + G D++A+A++GTGK+ + I +L++
Sbjct: 98 FEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLER 157
Query: 109 VDQNIKECQALILAPTRELAQQIQKVVIALGDFMS-VSCHACIGGTIVRDDIRKLEAGAQ 167
+D QA+++ PTRELA Q+ ++ I + M A GGT +RDDI +L+
Sbjct: 158 LDLKKDNIQAMVIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNLRDDIMRLDDTVH 217
Query: 168 VVVGTPGRVFDMISRGALSTKQIRMFVLDEADEMLSRGFKDQIYDVFKHLNNDVQVILLS 227
VV+ TPGR+ D+I +G ++M VLDEAD++LS+ F + D+ L + Q++L S
Sbjct: 218 VVIATPGRILDLIKKGVAKVDHVQMIVLDEADKLLSQDFVQIMEDIILTLPKNRQILLYS 277
Query: 228 ATMPADVLDVSMKFMRDPIKILVKKEELTLE 258
AT P V ++ P +I + EELTL+
Sbjct: 278 ATFPLSVQKFMNSHLQKPYEINLM-EELTLK 307
>MGI|MGI:104976 [details] [associations]
symbol:Ddx6 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 6"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=ISO] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0010494 "cytoplasmic stress
granule" evidence=ISO] [GO:0016442 "RNA-induced silencing complex"
evidence=ISO] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0033962 "cytoplasmic mRNA processing body assembly"
evidence=ISO] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 MGI:MGI:104976 GO:GO:0005524
GO:GO:0003723 GO:GO:0000932 GO:GO:0016442 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0010494 GO:GO:0033962
GO:GO:0008026 eggNOG:COG0513 GeneTree:ENSGT00530000063986
HOGENOM:HOG000268797 KO:K12614 OMA:YSHARMK InterPro:IPR014014
PROSITE:PS51195 HOVERGEN:HBG106685 OrthoDB:EOG4J1182 CTD:1656
EMBL:D50494 EMBL:AK054144 EMBL:AK148483 EMBL:BC021452 EMBL:AF038995
IPI:IPI00109932 RefSeq:NP_001104296.1 RefSeq:NP_031867.1
RefSeq:NP_851841.2 UniGene:Mm.267061 ProteinModelPortal:P54823
SMR:P54823 IntAct:P54823 STRING:P54823 PhosphoSite:P54823
PaxDb:P54823 PRIDE:P54823 Ensembl:ENSMUST00000170489 GeneID:13209
KEGG:mmu:13209 UCSC:uc009pdy.2 InParanoid:P54823 NextBio:283376
Bgee:P54823 CleanEx:MM_DDX6 Genevestigator:P54823
GermOnline:ENSMUSG00000032097 Uniprot:P54823
Length = 483
Score = 390 (142.3 bits), Expect = 3.5e-36, P = 3.5e-36
Identities = 82/211 (38%), Positives = 128/211 (60%)
Query: 49 FDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGNDVIAQAQSGTGKTATFSISILQQ 108
F+D L ELL GI+ G+EKPS IQ+ +I + G D++A+A++GTGK+ + I +L++
Sbjct: 98 FEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLER 157
Query: 109 VDQNIKECQALILAPTRELAQQIQKVVIALGDFMS-VSCHACIGGTIVRDDIRKLEAGAQ 167
+D QA+++ PTRELA Q+ ++ I + M A GGT +RDDI +L+
Sbjct: 158 LDLKKDNIQAMVIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNLRDDIMRLDDTVH 217
Query: 168 VVVGTPGRVFDMISRGALSTKQIRMFVLDEADEMLSRGFKDQIYDVFKHLNNDVQVILLS 227
VV+ TPGR+ D+I +G ++M VLDEAD++LS+ F + D+ L + Q++L S
Sbjct: 218 VVIATPGRILDLIKKGVAKVDHVQMIVLDEADKLLSQDFVQIMEDIILTLPKNRQILLYS 277
Query: 228 ATMPADVLDVSMKFMRDPIKILVKKEELTLE 258
AT P V ++ P +I + EELTL+
Sbjct: 278 ATFPLSVQKFMNSHLQKPYEINLM-EELTLK 307
>RGD|1564560 [details] [associations]
symbol:Ddx6 "DEAD (Asp-Glu-Ala-Asp) box helicase 6"
species:10116 "Rattus norvegicus" [GO:0000932 "cytoplasmic mRNA
processing body" evidence=IEA;ISO] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0010494 "cytoplasmic stress
granule" evidence=IEA;ISO] [GO:0016442 "RNA-induced silencing
complex" evidence=IEA;ISO] [GO:0033962 "cytoplasmic mRNA processing
body assembly" evidence=IEA;ISO] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 RGD:1564560
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:CH473975 GO:GO:0008026
GeneTree:ENSGT00530000063986 KO:K12614 OMA:YSHARMK
InterPro:IPR014014 PROSITE:PS51195 OrthoDB:EOG4J1182 CTD:1656
IPI:IPI00558056 RefSeq:NP_001102762.1 UniGene:Rn.231713
Ensembl:ENSRNOT00000017391 GeneID:500988 KEGG:rno:500988
UCSC:RGD:1564560 NextBio:707903 Uniprot:D3ZD73
Length = 483
Score = 390 (142.3 bits), Expect = 3.5e-36, P = 3.5e-36
Identities = 82/211 (38%), Positives = 128/211 (60%)
Query: 49 FDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGNDVIAQAQSGTGKTATFSISILQQ 108
F+D L ELL GI+ G+EKPS IQ+ +I + G D++A+A++GTGK+ + I +L++
Sbjct: 98 FEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLER 157
Query: 109 VDQNIKECQALILAPTRELAQQIQKVVIALGDFMS-VSCHACIGGTIVRDDIRKLEAGAQ 167
+D QA+++ PTRELA Q+ ++ I + M A GGT +RDDI +L+
Sbjct: 158 LDLKKDNIQAMVIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNLRDDIMRLDDTVH 217
Query: 168 VVVGTPGRVFDMISRGALSTKQIRMFVLDEADEMLSRGFKDQIYDVFKHLNNDVQVILLS 227
VV+ TPGR+ D+I +G ++M VLDEAD++LS+ F + D+ L + Q++L S
Sbjct: 218 VVIATPGRILDLIKKGVAKVDHVQMIVLDEADKLLSQDFVQIMEDIILTLPKNRQILLYS 277
Query: 228 ATMPADVLDVSMKFMRDPIKILVKKEELTLE 258
AT P V ++ P +I + EELTL+
Sbjct: 278 ATFPLSVQKFMNSHLQKPYEINLM-EELTLK 307
>UNIPROTKB|Q11039 [details] [associations]
symbol:deaD "Cold-shock DEAD box protein A homolog"
species:1773 "Mycobacterium tuberculosis" [GO:0005618 "cell wall"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005829 GO:GO:0005524 GO:GO:0005618
GO:GO:0006355 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR EMBL:BX842576 GO:GO:0006351 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268810 KO:K05592 InterPro:IPR005580 Pfam:PF03880
PIR:E70752 RefSeq:NP_215769.1 RefSeq:NP_335736.1
RefSeq:YP_006514628.1 ProteinModelPortal:Q11039 SMR:Q11039
PRIDE:Q11039 EnsemblBacteria:EBMYCT00000002426
EnsemblBacteria:EBMYCT00000070115 GeneID:13319832 GeneID:887069
GeneID:924778 KEGG:mtc:MT1292 KEGG:mtu:Rv1253 KEGG:mtv:RVBD_1253
PATRIC:18124606 TubercuList:Rv1253 OMA:LPQGMPK
ProtClustDB:CLSK791051 Uniprot:Q11039
Length = 563
Score = 389 (142.0 bits), Expect = 4.6e-36, P = 4.6e-36
Identities = 85/214 (39%), Positives = 122/214 (57%)
Query: 46 AENFDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGNDVIAQAQSGTGKTATFSISI 105
A F D+++ +LR I G+E P+AIQ I + G+DV+ AQ+GTGKTA F+I +
Sbjct: 12 AATFADLQIHPRVLRAIGDVGYESPTAIQAATIPALMAGSDVVGLAQTGTGKTAAFAIPM 71
Query: 106 LQQVDQNIKECQALILAPTRELAQQIQKVVIALGDFMS-VSCHACIGGTIVRDDIRKLEA 164
L ++D K QAL+L PTRELA Q+ + G ++S ++ GG+ + L
Sbjct: 72 LSKIDITSKVPQALVLVPTRELALQVAEAFGRYGAYLSQLNVLPIYGGSSYAVQLAGLRR 131
Query: 165 GAQVVVGTPGRVFDMISRGALSTKQIRMFVLDEADEMLSRGFKDQIYDVFKHLNNDVQVI 224
GAQVVVGTPGR+ D + R L ++ VLDEADEML+ GF D + + QV
Sbjct: 132 GAQVVVGTPGRMIDHLERATLDLSRVDFLVLDEADEMLTMGFADDVERILSETPEYKQVA 191
Query: 225 LLSATMPADVLDVSMKFMRDPIKILVKKEELTLE 258
L SATMP + +S K++ DP ++ K + E
Sbjct: 192 LFSATMPPAIRKLSAKYLHDPFEVTCKAKTAVAE 225
>UNIPROTKB|E1C8R1 [details] [associations]
symbol:DDX6 "Probable ATP-dependent RNA helicase DDX6"
species:9031 "Gallus gallus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GeneTree:ENSGT00530000063986 KO:K12614 InterPro:IPR014014
PROSITE:PS51195 UniGene:Gga.2331 CTD:1656 EMBL:AADN02058042
EMBL:AADN02058043 IPI:IPI00818395 RefSeq:NP_001006319.2
PRIDE:E1C8R1 Ensembl:ENSGALT00000040594 GeneID:419783
KEGG:gga:419783 NextBio:20822787 ArrayExpress:E1C8R1 Uniprot:E1C8R1
Length = 483
Score = 387 (141.3 bits), Expect = 7.2e-36, P = 7.2e-36
Identities = 81/211 (38%), Positives = 129/211 (61%)
Query: 49 FDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGNDVIAQAQSGTGKTATFSISILQQ 108
F+D L ELL GI+ G+EKPS IQ+ +I + G D++A+A++GTGK+ + I +L++
Sbjct: 98 FEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLER 157
Query: 109 VDQNIKECQALILAPTRELAQQIQKVVIALGDFMS-VSCHACIGGTIVRDDIRKLEAGAQ 167
+D QA+++ PTRELA Q+ ++ I + M A GGT +RDDI +L+
Sbjct: 158 LDLKKDNIQAMVIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNLRDDIMRLDDTVH 217
Query: 168 VVVGTPGRVFDMISRGALSTKQIRMFVLDEADEMLSRGFKDQIYDVFKHLNNDVQVILLS 227
VV+ TPGR+ D+I +G + ++M VLDEA+++LS+ F + D+ L + Q++L S
Sbjct: 218 VVIATPGRILDLIKKGVAKVEHVQMIVLDEANKLLSQDFVQIMEDIILTLPKNRQILLYS 277
Query: 228 ATMPADVLDVSMKFMRDPIKILVKKEELTLE 258
AT P V ++ P +I + EELTL+
Sbjct: 278 ATFPLSVQKFMNSHLQKPYEINLM-EELTLK 307
>UNIPROTKB|A0R8U6 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:412694 "Bacillus thuringiensis str. Al Hakam" [GO:0003723
"RNA binding" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
[GO:0043590 "bacterial nucleoid" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043590 EMBL:CP000485 RefSeq:YP_893146.1
ProteinModelPortal:A0R8U6 STRING:A0R8U6
EnsemblBacteria:EBBACT00000069056 GeneID:4546566
GenomeReviews:CP000485_GR KEGG:btl:BALH_0232 PATRIC:18992499
HOGENOM:HOG000268810 KO:K05592 OMA:IIDHINR ProtClustDB:CLSK915749
BioCyc:BTHU412694:GH1W-393-MONOMER Uniprot:A0R8U6
Length = 528
Score = 386 (140.9 bits), Expect = 9.2e-36, P = 9.2e-36
Identities = 80/209 (38%), Positives = 125/209 (59%)
Query: 49 FDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGNDVIAQAQSGTGKTATFSISILQQ 108
F ++ LS+ LL+ + + GFE+ + IQ I ++G D+I QAQ+GTGKTA F + +L +
Sbjct: 4 FRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLDK 63
Query: 109 VDQNIKECQALILAPTRELAQQIQKVVIALGDFMSVSCHACIGGTIVRDDIRKLEAGAQV 168
VD + + Q +++APTRELA Q+ + + +G V GG + IR L+ +
Sbjct: 64 VDTHKESVQGIVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRALKKHPHI 123
Query: 169 VVGTPGRVFDMISRGALSTKQIRMFVLDEADEMLSRGFKDQIYDVFKHLNNDVQVILLSA 228
+VGTPGR+ D I+R L + + VLDEADEML+ GF + I + + Q +L SA
Sbjct: 124 IVGTPGRILDHINRKTLRLQNVETVVLDEADEMLNMGFIEDIEAILTDVPETHQTLLFSA 183
Query: 229 TMPADVLDVSMKFMRDPIKILVKKEELTL 257
TMP + ++ +FM +P I VK +E+T+
Sbjct: 184 TMPDPIRRIAERFMTEPQHIKVKAKEVTM 212
>UNIPROTKB|P96614 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:224308 "Bacillus subtilis subsp. subtilis str. 168"
[GO:0003723 "RNA binding" evidence=IDA] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IDA] [GO:0009409
"response to cold" evidence=IGI] [GO:0010501 "RNA secondary
structure unwinding" evidence=IDA] [GO:0043590 "bacterial nucleoid"
evidence=IDA] [GO:0005840 "ribosome" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005737 GO:GO:0009409
GO:GO:0003723 EMBL:AL009126 GenomeReviews:AL009126_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043590
HOGENOM:HOG000268810 HSSP:Q58083 ProtClustDB:CLSK886742
EMBL:AB001488 PIR:D69772 RefSeq:NP_388339.1
ProteinModelPortal:P96614 SMR:P96614 IntAct:P96614 DNASU:938170
EnsemblBacteria:EBBACT00000000739 GeneID:938170 KEGG:bsu:BSU04580
PATRIC:18972500 GenoList:BSU04580 BioCyc:BSUB:BSU04580-MONOMER
GO:GO:0010501 Uniprot:P96614
Length = 494
Score = 386 (140.9 bits), Expect = 9.2e-36, P = 9.2e-36
Identities = 78/209 (37%), Positives = 124/209 (59%)
Query: 49 FDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGNDVIAQAQSGTGKTATFSISILQQ 108
F D LS +L++ I GFE+ + IQ + I + DVI QAQ+GTGKTA F I ++++
Sbjct: 5 FQDFNLSSDLMKAINRMGFEEATPIQAQTIPLGLSNKDVIGQAQTGTGKTAAFGIPLVEK 64
Query: 109 VDQNIKECQALILAPTRELAQQIQKVVIALGDFMSVSCHACIGGTIVRDDIRKLEAGAQV 168
++ QA+++APTRELA Q+ + + +G GG + IR L+ +
Sbjct: 65 INPESPNIQAIVIAPTRELAIQVSEELYKIGQDKRAKVLPIYGGQDIGRQIRALKKNPNI 124
Query: 169 VVGTPGRVFDMISRGALSTKQIRMFVLDEADEMLSRGFKDQIYDVFKHLNNDVQVILLSA 228
+VGTPGR+ D I+R + + V+DEADEML+ GF D I + ++ ++ Q +L SA
Sbjct: 125 IVGTPGRLLDHINRRTIRLNNVNTVVMDEADEMLNMGFIDDIESILSNVPSEHQTLLFSA 184
Query: 229 TMPADVLDVSMKFMRDPIKILVKKEELTL 257
TMPA + ++ +FM +P + VK +E+T+
Sbjct: 185 TMPAPIKRIAERFMTEPEHVKVKAKEMTV 213
>UNIPROTKB|Q63GX5 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:288681 "Bacillus cereus E33L" [GO:0003723 "RNA binding"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS] [GO:0043590
"bacterial nucleoid" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043590 KO:K05592 OMA:IIDHINR
ProtClustDB:CLSK915749 HSSP:Q58083 EMBL:CP000001 RefSeq:YP_081836.1
ProteinModelPortal:Q63GX5 STRING:Q63GX5
EnsemblBacteria:EBBACT00000041470 GeneID:3022962
GenomeReviews:CP000001_GR KEGG:bcz:BCZK0221 PATRIC:18883656
BioCyc:BCER288681:GHG7-745-MONOMER Uniprot:Q63GX5
Length = 528
Score = 386 (140.9 bits), Expect = 9.2e-36, P = 9.2e-36
Identities = 80/209 (38%), Positives = 125/209 (59%)
Query: 49 FDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGNDVIAQAQSGTGKTATFSISILQQ 108
F ++ LS+ LL+ + + GFE+ + IQ I ++G D+I QAQ+GTGKTA F + +L +
Sbjct: 4 FRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLDK 63
Query: 109 VDQNIKECQALILAPTRELAQQIQKVVIALGDFMSVSCHACIGGTIVRDDIRKLEAGAQV 168
VD + + Q +++APTRELA Q+ + + +G V GG + IR L+ +
Sbjct: 64 VDTHKESVQGIVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRALKKHPHI 123
Query: 169 VVGTPGRVFDMISRGALSTKQIRMFVLDEADEMLSRGFKDQIYDVFKHLNNDVQVILLSA 228
+VGTPGR+ D I+R L + + VLDEADEML+ GF + I + + Q +L SA
Sbjct: 124 IVGTPGRILDHINRKTLRLQNVETVVLDEADEMLNMGFIEDIEAILTDVPETHQTLLFSA 183
Query: 229 TMPADVLDVSMKFMRDPIKILVKKEELTL 257
TMP + ++ +FM +P I VK +E+T+
Sbjct: 184 TMPDPIRRIAERFMTEPQHIKVKAKEVTM 212
>UNIPROTKB|Q6HPE6 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:281309 "Bacillus thuringiensis serovar konkukian str.
97-27" [GO:0003723 "RNA binding" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005524
"ATP binding" evidence=ISS] [GO:0043590 "bacterial nucleoid"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GO:GO:0043590 HOGENOM:HOG000268810 KO:K05592 OMA:IIDHINR
ProtClustDB:CLSK915749 HSSP:Q58083 EMBL:AE017355 RefSeq:YP_034574.1
ProteinModelPortal:Q6HPE6 EnsemblBacteria:EBBACT00000074889
GeneID:2854643 GenomeReviews:AE017355_GR KEGG:btk:BT9727_0219
PATRIC:18980863 BioCyc:BTHU281309:GJID-254-MONOMER Uniprot:Q6HPE6
Length = 528
Score = 386 (140.9 bits), Expect = 9.2e-36, P = 9.2e-36
Identities = 80/209 (38%), Positives = 125/209 (59%)
Query: 49 FDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGNDVIAQAQSGTGKTATFSISILQQ 108
F ++ LS+ LL+ + + GFE+ + IQ I ++G D+I QAQ+GTGKTA F + +L +
Sbjct: 4 FRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLDK 63
Query: 109 VDQNIKECQALILAPTRELAQQIQKVVIALGDFMSVSCHACIGGTIVRDDIRKLEAGAQV 168
VD + + Q +++APTRELA Q+ + + +G V GG + IR L+ +
Sbjct: 64 VDTHKESVQGIVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRALKKHPHI 123
Query: 169 VVGTPGRVFDMISRGALSTKQIRMFVLDEADEMLSRGFKDQIYDVFKHLNNDVQVILLSA 228
+VGTPGR+ D I+R L + + VLDEADEML+ GF + I + + Q +L SA
Sbjct: 124 IVGTPGRILDHINRKTLRLQNVETVVLDEADEMLNMGFIEDIEAILTDVPETHQTLLFSA 183
Query: 229 TMPADVLDVSMKFMRDPIKILVKKEELTL 257
TMP + ++ +FM +P I VK +E+T+
Sbjct: 184 TMPDPIRRIAERFMTEPQHIKVKAKEVTM 212
>UNIPROTKB|Q73EU1 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:222523 "Bacillus cereus ATCC 10987" [GO:0003723 "RNA
binding" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
[GO:0043590 "bacterial nucleoid" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043590 HOGENOM:HOG000268810 KO:K05592
OMA:IIDHINR ProtClustDB:CLSK915749 HSSP:Q58083 EMBL:AE017194
RefSeq:NP_976595.1 ProteinModelPortal:Q73EU1 STRING:Q73EU1
DNASU:2752637 EnsemblBacteria:EBBACT00000029857 GeneID:2752637
GenomeReviews:AE017194_GR KEGG:bca:BCE_0267 PATRIC:18849372
Uniprot:Q73EU1
Length = 525
Score = 386 (140.9 bits), Expect = 9.2e-36, P = 9.2e-36
Identities = 80/209 (38%), Positives = 125/209 (59%)
Query: 49 FDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGNDVIAQAQSGTGKTATFSISILQQ 108
F ++ LS+ LL+ + + GFE+ + IQ I ++G D+I QAQ+GTGKTA F + +L +
Sbjct: 4 FRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLDK 63
Query: 109 VDQNIKECQALILAPTRELAQQIQKVVIALGDFMSVSCHACIGGTIVRDDIRKLEAGAQV 168
VD + + Q +++APTRELA Q+ + + +G V GG + IR L+ +
Sbjct: 64 VDTHKESVQGIVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRALKKHPHI 123
Query: 169 VVGTPGRVFDMISRGALSTKQIRMFVLDEADEMLSRGFKDQIYDVFKHLNNDVQVILLSA 228
+VGTPGR+ D I+R L + + VLDEADEML+ GF + I + + Q +L SA
Sbjct: 124 IVGTPGRILDHINRKTLRLQNVETVVLDEADEMLNMGFIEDIEAILTDVPETHQTLLFSA 183
Query: 229 TMPADVLDVSMKFMRDPIKILVKKEELTL 257
TMP + ++ +FM +P I VK +E+T+
Sbjct: 184 TMPDPIRRIAERFMTEPQHIKVKAKEVTM 212
>UNIPROTKB|Q81IT9 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:226900 "Bacillus cereus ATCC 14579" [GO:0003723 "RNA
binding" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
[GO:0043590 "bacterial nucleoid" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043590 KO:K05592 OMA:IIDHINR
ProtClustDB:CLSK915749 HSSP:Q58083 EMBL:AE016877 RefSeq:NP_830127.1
STRING:Q81IT9 DNASU:1202612 EnsemblBacteria:EBBACT00000032730
GeneID:1202612 GenomeReviews:AE016877_GR KEGG:bce:BC0259
PATRIC:32596146 BioCyc:BCER226900:GJEU-261-MONOMER Uniprot:Q81IT9
Length = 533
Score = 386 (140.9 bits), Expect = 9.2e-36, P = 9.2e-36
Identities = 80/209 (38%), Positives = 125/209 (59%)
Query: 49 FDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGNDVIAQAQSGTGKTATFSISILQQ 108
F ++ LS+ LL+ + + GFE+ + IQ I ++G D+I QAQ+GTGKTA F + +L +
Sbjct: 4 FRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLDK 63
Query: 109 VDQNIKECQALILAPTRELAQQIQKVVIALGDFMSVSCHACIGGTIVRDDIRKLEAGAQV 168
VD + + Q +++APTRELA Q+ + + +G V GG + IR L+ +
Sbjct: 64 VDTHKESVQGIVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRALKKHPHI 123
Query: 169 VVGTPGRVFDMISRGALSTKQIRMFVLDEADEMLSRGFKDQIYDVFKHLNNDVQVILLSA 228
+VGTPGR+ D I+R L + + VLDEADEML+ GF + I + + Q +L SA
Sbjct: 124 IVGTPGRILDHINRKTLRLQNVETVVLDEADEMLNMGFIEDIEAILTDVPETHQTLLFSA 183
Query: 229 TMPADVLDVSMKFMRDPIKILVKKEELTL 257
TMP + ++ +FM +P I VK +E+T+
Sbjct: 184 TMPDPIRRIAERFMTEPQHIKVKAKEVTM 212
>UNIPROTKB|Q81VG0 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:1392 "Bacillus anthracis" [GO:0003723 "RNA binding"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] [GO:0043590 "bacterial nucleoid"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043590
HOGENOM:HOG000268810 KO:K05592 OMA:IIDHINR ProtClustDB:CLSK915749
RefSeq:NP_842800.1 RefSeq:YP_016853.1 RefSeq:YP_026518.1
HSSP:Q58083 ProteinModelPortal:Q81VG0 DNASU:1087008
EnsemblBacteria:EBBACT00000010496 EnsemblBacteria:EBBACT00000018111
EnsemblBacteria:EBBACT00000022275 GeneID:1087008 GeneID:2818435
GeneID:2849489 KEGG:ban:BA_0247 KEGG:bar:GBAA_0247 KEGG:bat:BAS0233
BioCyc:BANT260799:GJAJ-255-MONOMER
BioCyc:BANT261594:GJ7F-263-MONOMER Uniprot:Q81VG0
Length = 528
Score = 386 (140.9 bits), Expect = 9.2e-36, P = 9.2e-36
Identities = 80/209 (38%), Positives = 125/209 (59%)
Query: 49 FDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGNDVIAQAQSGTGKTATFSISILQQ 108
F ++ LS+ LL+ + + GFE+ + IQ I ++G D+I QAQ+GTGKTA F + +L +
Sbjct: 4 FRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLDK 63
Query: 109 VDQNIKECQALILAPTRELAQQIQKVVIALGDFMSVSCHACIGGTIVRDDIRKLEAGAQV 168
VD + + Q +++APTRELA Q+ + + +G V GG + IR L+ +
Sbjct: 64 VDTHKESVQGIVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRALKKHPHI 123
Query: 169 VVGTPGRVFDMISRGALSTKQIRMFVLDEADEMLSRGFKDQIYDVFKHLNNDVQVILLSA 228
+VGTPGR+ D I+R L + + VLDEADEML+ GF + I + + Q +L SA
Sbjct: 124 IVGTPGRILDHINRKTLRLQNVETVVLDEADEMLNMGFIEDIEAILTDVPETHQTLLFSA 183
Query: 229 TMPADVLDVSMKFMRDPIKILVKKEELTL 257
TMP + ++ +FM +P I VK +E+T+
Sbjct: 184 TMPDPIRRIAERFMTEPQHIKVKAKEVTM 212
>TIGR_CMR|BA_0247 [details] [associations]
symbol:BA_0247 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:198094 "Bacillus anthracis str. Ames" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043590
HOGENOM:HOG000268810 KO:K05592 OMA:IIDHINR ProtClustDB:CLSK915749
RefSeq:NP_842800.1 RefSeq:YP_016853.1 RefSeq:YP_026518.1
HSSP:Q58083 ProteinModelPortal:Q81VG0 DNASU:1087008
EnsemblBacteria:EBBACT00000010496 EnsemblBacteria:EBBACT00000018111
EnsemblBacteria:EBBACT00000022275 GeneID:1087008 GeneID:2818435
GeneID:2849489 KEGG:ban:BA_0247 KEGG:bar:GBAA_0247 KEGG:bat:BAS0233
BioCyc:BANT260799:GJAJ-255-MONOMER
BioCyc:BANT261594:GJ7F-263-MONOMER Uniprot:Q81VG0
Length = 528
Score = 386 (140.9 bits), Expect = 9.2e-36, P = 9.2e-36
Identities = 80/209 (38%), Positives = 125/209 (59%)
Query: 49 FDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGNDVIAQAQSGTGKTATFSISILQQ 108
F ++ LS+ LL+ + + GFE+ + IQ I ++G D+I QAQ+GTGKTA F + +L +
Sbjct: 4 FRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLDK 63
Query: 109 VDQNIKECQALILAPTRELAQQIQKVVIALGDFMSVSCHACIGGTIVRDDIRKLEAGAQV 168
VD + + Q +++APTRELA Q+ + + +G V GG + IR L+ +
Sbjct: 64 VDTHKESVQGIVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRALKKHPHI 123
Query: 169 VVGTPGRVFDMISRGALSTKQIRMFVLDEADEMLSRGFKDQIYDVFKHLNNDVQVILLSA 228
+VGTPGR+ D I+R L + + VLDEADEML+ GF + I + + Q +L SA
Sbjct: 124 IVGTPGRILDHINRKTLRLQNVETVVLDEADEMLNMGFIEDIEAILTDVPETHQTLLFSA 183
Query: 229 TMPADVLDVSMKFMRDPIKILVKKEELTL 257
TMP + ++ +FM +P I VK +E+T+
Sbjct: 184 TMPDPIRRIAERFMTEPQHIKVKAKEVTM 212
>UNIPROTKB|Q3AFI3 [details] [associations]
symbol:CHY_0229 "ATP-dependent RNA helicase, DEAD box
family" species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268810 KO:K05592 RefSeq:YP_359101.1
ProteinModelPortal:Q3AFI3 STRING:Q3AFI3 GeneID:3727044
KEGG:chy:CHY_0229 PATRIC:21273641 OMA:YAAKGLH
BioCyc:CHYD246194:GJCN-230-MONOMER Uniprot:Q3AFI3
Length = 430
Score = 385 (140.6 bits), Expect = 1.2e-35, P = 1.2e-35
Identities = 80/196 (40%), Positives = 116/196 (59%)
Query: 47 ENFDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGNDVIAQAQSGTGKTATFSISIL 106
E F + L LL+ + GFE P+ IQ+ AI + G++++ QA +GTGKTA + + +L
Sbjct: 2 EEFKKLGLITPLLKAVNDLGFEMPTPIQKEAIPLILEGHNLVGQAPTGTGKTAAYLLPVL 61
Query: 107 QQVDQNIKECQALILAPTRELAQQIQKVVIALGDFMSVSCHACIGGTIVRDDIRKLEAGA 166
Q++ + K+ Q LI+ PTRELA Q+ V LG ++ V A GG + IR L G
Sbjct: 62 QRIQRG-KKAQVLIVTPTRELALQVADEVAKLGKYLKVRALAVYGGQAIERQIRGLRQGV 120
Query: 167 QVVVGTPGRVFDMISRGALSTKQIRMFVLDEADEMLSRGFKDQIYDVFKHLNNDVQVILL 226
+V+VGTPGR+ D I R +I++ +LDEADEML GF D I + L N Q +L
Sbjct: 121 EVIVGTPGRILDHIGRKTFPAAEIKIVILDEADEMLDMGFIDDIEAILNTLTNRQQTLLF 180
Query: 227 SATMPADVLDVSMKFM 242
SAT+PA + + KF+
Sbjct: 181 SATLPAPIKTIIKKFL 196
>TIGR_CMR|CHY_0229 [details] [associations]
symbol:CHY_0229 "ATP-dependent RNA helicase, DEAD box
family" species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268810 KO:K05592 RefSeq:YP_359101.1
ProteinModelPortal:Q3AFI3 STRING:Q3AFI3 GeneID:3727044
KEGG:chy:CHY_0229 PATRIC:21273641 OMA:YAAKGLH
BioCyc:CHYD246194:GJCN-230-MONOMER Uniprot:Q3AFI3
Length = 430
Score = 385 (140.6 bits), Expect = 1.2e-35, P = 1.2e-35
Identities = 80/196 (40%), Positives = 116/196 (59%)
Query: 47 ENFDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGNDVIAQAQSGTGKTATFSISIL 106
E F + L LL+ + GFE P+ IQ+ AI + G++++ QA +GTGKTA + + +L
Sbjct: 2 EEFKKLGLITPLLKAVNDLGFEMPTPIQKEAIPLILEGHNLVGQAPTGTGKTAAYLLPVL 61
Query: 107 QQVDQNIKECQALILAPTRELAQQIQKVVIALGDFMSVSCHACIGGTIVRDDIRKLEAGA 166
Q++ + K+ Q LI+ PTRELA Q+ V LG ++ V A GG + IR L G
Sbjct: 62 QRIQRG-KKAQVLIVTPTRELALQVADEVAKLGKYLKVRALAVYGGQAIERQIRGLRQGV 120
Query: 167 QVVVGTPGRVFDMISRGALSTKQIRMFVLDEADEMLSRGFKDQIYDVFKHLNNDVQVILL 226
+V+VGTPGR+ D I R +I++ +LDEADEML GF D I + L N Q +L
Sbjct: 121 EVIVGTPGRILDHIGRKTFPAAEIKIVILDEADEMLDMGFIDDIEAILNTLTNRQQTLLF 180
Query: 227 SATMPADVLDVSMKFM 242
SAT+PA + + KF+
Sbjct: 181 SATLPAPIKTIIKKFL 196
>WB|WBGene00000479 [details] [associations]
symbol:cgh-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0002009 "morphogenesis of an
epithelium" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
development" evidence=IMP] [GO:0006915 "apoptotic process"
evidence=IMP] [GO:0051729 "germline cell cycle switching, mitotic
to meiotic cell cycle" evidence=IMP] [GO:0008219 "cell death"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0010467 "gene expression" evidence=IMP]
[GO:0007052 "mitotic spindle organization" evidence=IMP]
[GO:0007276 "gamete generation" evidence=IMP] [GO:0043066 "negative
regulation of apoptotic process" evidence=IMP] [GO:0016071 "mRNA
metabolic process" evidence=TAS] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0043186 "P granule" evidence=IDA] [GO:0000932
"cytoplasmic mRNA processing body" evidence=IDA] [GO:0003724 "RNA
helicase activity" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0017148 "negative regulation of translation"
evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0008340
GO:GO:0009792 GO:GO:0002009 GO:GO:0006898 GO:GO:0040007
GO:GO:0006915 GO:GO:0010467 GO:GO:0016071 GO:GO:0043066
GO:GO:0030154 GO:GO:0007052 GO:GO:0002119 GO:GO:0017148
GO:GO:0048477 GO:GO:0007283 GO:GO:0051729 GO:GO:0003723
GO:GO:0040035 GO:GO:0000932 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0007276 GO:GO:0008026 EMBL:FO080423
RefSeq:NP_498646.1 ProteinModelPortal:Q95YF3 SMR:Q95YF3
DIP:DIP-25457N IntAct:Q95YF3 MINT:MINT-250782 STRING:Q95YF3
PaxDb:Q95YF3 EnsemblMetazoa:C07H6.5.1 EnsemblMetazoa:C07H6.5.2
GeneID:176061 KEGG:cel:CELE_C07H6.5 UCSC:C07H6.5.1 CTD:176061
WormBase:C07H6.5 eggNOG:COG0513 GeneTree:ENSGT00530000063986
HOGENOM:HOG000268797 InParanoid:Q95YF3 KO:K12614 OMA:YSHARMK
NextBio:890944 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
Uniprot:Q95YF3
Length = 430
Score = 385 (140.6 bits), Expect = 1.2e-35, P = 1.2e-35
Identities = 78/209 (37%), Positives = 125/209 (59%)
Query: 49 FDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGNDVIAQAQSGTGKTATFSISILQQ 108
F+D L +LL GI+ G+EKPS IQ+ +I + G D++A+A++GTGKT + I ++++
Sbjct: 45 FEDFCLGRDLLMGIFEKGWEKPSPIQEASIGVALTGQDILARAKNGTGKTGAYCIPVIEK 104
Query: 109 VDQNIKECQALILAPTRELAQQIQKVVIALGDFMSVSCHACIGGTIVRDDIRKLEAGAQV 168
+ +K QA+++ PTRELA Q ++ + L + + GGT +RDDI +L +
Sbjct: 105 IQPALKAIQAMVIVPTRELALQTSQICVELSKHIQLKVMVTTGGTDLRDDIMRLNGTVHL 164
Query: 169 VVGTPGRVFDMISRGALSTKQIRMFVLDEADEMLSRGFKDQIYDVFKHLNNDVQVILLSA 228
V+ TPGR+ D++ +G + + VLDEAD++LS+ F+ + + L + QV+L SA
Sbjct: 165 VIATPGRILDLMEKGVAKMEHCKTLVLDEADKLLSQDFQGILDRLINFLPKERQVMLYSA 224
Query: 229 TMPADVLDVSMKFMRDPIKILVKKEELTL 257
T P V K M P +I + EELTL
Sbjct: 225 TFPNTVTSFMQKHMHKPYEINLM-EELTL 252
>UNIPROTKB|Q95YF3 [details] [associations]
symbol:cgh-1 "ATP-dependent RNA helicase cgh-1"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0008340
GO:GO:0009792 GO:GO:0002009 GO:GO:0006898 GO:GO:0040007
GO:GO:0006915 GO:GO:0010467 GO:GO:0016071 GO:GO:0043066
GO:GO:0030154 GO:GO:0007052 GO:GO:0002119 GO:GO:0017148
GO:GO:0048477 GO:GO:0007283 GO:GO:0051729 GO:GO:0003723
GO:GO:0040035 GO:GO:0000932 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0007276 GO:GO:0008026 EMBL:FO080423
RefSeq:NP_498646.1 ProteinModelPortal:Q95YF3 SMR:Q95YF3
DIP:DIP-25457N IntAct:Q95YF3 MINT:MINT-250782 STRING:Q95YF3
PaxDb:Q95YF3 EnsemblMetazoa:C07H6.5.1 EnsemblMetazoa:C07H6.5.2
GeneID:176061 KEGG:cel:CELE_C07H6.5 UCSC:C07H6.5.1 CTD:176061
WormBase:C07H6.5 eggNOG:COG0513 GeneTree:ENSGT00530000063986
HOGENOM:HOG000268797 InParanoid:Q95YF3 KO:K12614 OMA:YSHARMK
NextBio:890944 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
Uniprot:Q95YF3
Length = 430
Score = 385 (140.6 bits), Expect = 1.2e-35, P = 1.2e-35
Identities = 78/209 (37%), Positives = 125/209 (59%)
Query: 49 FDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGNDVIAQAQSGTGKTATFSISILQQ 108
F+D L +LL GI+ G+EKPS IQ+ +I + G D++A+A++GTGKT + I ++++
Sbjct: 45 FEDFCLGRDLLMGIFEKGWEKPSPIQEASIGVALTGQDILARAKNGTGKTGAYCIPVIEK 104
Query: 109 VDQNIKECQALILAPTRELAQQIQKVVIALGDFMSVSCHACIGGTIVRDDIRKLEAGAQV 168
+ +K QA+++ PTRELA Q ++ + L + + GGT +RDDI +L +
Sbjct: 105 IQPALKAIQAMVIVPTRELALQTSQICVELSKHIQLKVMVTTGGTDLRDDIMRLNGTVHL 164
Query: 169 VVGTPGRVFDMISRGALSTKQIRMFVLDEADEMLSRGFKDQIYDVFKHLNNDVQVILLSA 228
V+ TPGR+ D++ +G + + VLDEAD++LS+ F+ + + L + QV+L SA
Sbjct: 165 VIATPGRILDLMEKGVAKMEHCKTLVLDEADKLLSQDFQGILDRLINFLPKERQVMLYSA 224
Query: 229 TMPADVLDVSMKFMRDPIKILVKKEELTL 257
T P V K M P +I + EELTL
Sbjct: 225 TFPNTVTSFMQKHMHKPYEINLM-EELTL 252
>UNIPROTKB|Q4K8U0 [details] [associations]
symbol:deaD "Cold-shock DEAD box protein A" species:220664
"Pseudomonas protegens Pf-5" [GO:0003723 "RNA binding"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0006950 "response to stress"
evidence=ISS] [GO:0008026 "ATP-dependent helicase activity"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0006950
GO:GO:0006355 GO:GO:0003723 EMBL:CP000076 GenomeReviews:CP000076_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268810 KO:K05592 InterPro:IPR005580 Pfam:PF03880
OMA:LPQGMPK RefSeq:YP_261343.1 ProteinModelPortal:Q4K8U0
GeneID:3477377 KEGG:pfl:PFL_4251 PATRIC:19877913
ProtClustDB:CLSK867560 BioCyc:PFLU220664:GIX8-4286-MONOMER
Uniprot:Q4K8U0
Length = 557
Score = 383 (139.9 bits), Expect = 2.1e-35, P = 2.1e-35
Identities = 85/211 (40%), Positives = 127/211 (60%)
Query: 49 FDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGNDVIAQAQSGTGKTATFSISILQQ 108
F +EL ++ + A G+E+PSAIQQ++I + G+D+I QAQ+GTGKTA F++ IL +
Sbjct: 8 FAALELHPNIVAAVVATGYEEPSAIQQQSIPIILAGHDMIGQAQTGTGKTAAFALPILHR 67
Query: 109 VDQNIKECQALILAPTRELAQQIQKVVIALGDFM-SVSCHACIGGTIVRDDIRKLEAGAQ 167
+D + +E QALILAPTRELA Q+ M V+ A GG + ++ + GAQ
Sbjct: 68 IDPSKREPQALILAPTRELALQVATAFETYAKQMPGVTVVAVYGGAPMGPQLKAIRNGAQ 127
Query: 168 VVVGTPGRVFDMISRGALSTKQIRMFVLDEADEMLSRGFKDQIYDVFKHLNNDVQVILLS 227
+VV TPGR+ D + R + VLDEADEML GF D + +FK + Q +L S
Sbjct: 128 IVVATPGRLCDHLRRDEKVLATVNHLVLDEADEMLKLGFMDDLEVIFKAMPETRQTVLFS 187
Query: 228 ATMPADVLDVSMKFMRDP--IKILVKKEELT 256
AT+P + ++ + ++DP +KI K + +T
Sbjct: 188 ATLPQSIRAIAERHLKDPKHVKIQSKTQTVT 218
>TIGR_CMR|SO_4034 [details] [associations]
symbol:SO_4034 "ATP-dependent RNA helicase DeaD"
species:211586 "Shewanella oneidensis MR-1" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0009631 "cold
acclimation" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:AE014299 GenomeReviews:AE014299_GR InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268810 KO:K05592 InterPro:IPR005580
Pfam:PF03880 HSSP:P10081 OMA:LPQGMPK RefSeq:NP_719564.1
ProteinModelPortal:Q8EA75 GeneID:1171660 KEGG:son:SO_4034
PATRIC:23527732 ProtClustDB:CLSK907463 Uniprot:Q8EA75
Length = 623
Score = 384 (140.2 bits), Expect = 4.6e-35, P = 4.6e-35
Identities = 84/212 (39%), Positives = 123/212 (58%)
Query: 49 FDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGNDVIAQAQSGTGKTATFSISILQQ 108
F ++ LSE LLR + G+EKP+ IQ +I P + G D++ QAQ+GTGKT F++ +L +
Sbjct: 8 FRELGLSENLLRALDELGYEKPTPIQSASIDPLMAGKDILGQAQTGTGKTGAFALPLLNK 67
Query: 109 VDQNIKECQALILAPTRELAQQIQKVVIALGDFMSVSCHAC--IGGTIVRDDIRKLEAGA 166
V Q L+LAPTRELA Q+ + + FM + H GG ++ + L+ G
Sbjct: 68 VTSQTTP-QILVLAPTRELAVQVAEAFSSYAKFMK-NFHVLPIYGGQSMQQQLNALKRGP 125
Query: 167 QVVVGTPGRVFDMISRGALSTKQIRMFVLDEADEMLSRGFKDQIYDVFKHLNNDVQVILL 226
QV+VGTPGRV D + RG L + ++ VLDEADEML GF D I + +H Q+ L
Sbjct: 126 QVIVGTPGRVMDHMRRGTLKLETLQALVLDEADEMLKMGFIDDIEWILEHTPPQRQLALF 185
Query: 227 SATMPADVLDVSMKFMRDPIKILVKKEELTLE 258
SATMP + V+ K +++ I + T++
Sbjct: 186 SATMPEQIKRVANKHLKNATNISIAASHTTVD 217
>GENEDB_PFALCIPARUM|PFC0915w [details] [associations]
symbol:PFC0915w "ATP-dependent RNA helicase,
putative" species:5833 "Plasmodium falciparum" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0006200 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
EMBL:AL844502 HOGENOM:HOG000268797 KO:K12614 OMA:YSHARMK
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
ProtClustDB:CLSZ2429504 RefSeq:XP_001351278.1
ProteinModelPortal:O97285 SMR:O97285 EnsemblProtists:PFC0915w:mRNA
GeneID:814522 KEGG:pfa:PFC0915w EuPathDB:PlasmoDB:PF3D7_0320800
Uniprot:O97285
Length = 433
Score = 379 (138.5 bits), Expect = 5.1e-35, P = 5.1e-35
Identities = 79/210 (37%), Positives = 128/210 (60%)
Query: 49 FDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGNDVIAQAQSGTGKTATFSISILQQ 108
F+D L ELL GI+ G+EKPS IQ+ +I + G +++A+A++GTGKTA F+I +L++
Sbjct: 62 FEDYFLKRELLMGIFEKGYEKPSPIQEESIPVALAGKNILARAKNGTGKTAAFAIPLLEK 121
Query: 109 VDQNIKECQALILAPTRELAQQIQKVVIALGDFMSVSCHACIGGTIVRDDIRKLEAGAQV 168
+ + Q LIL PTRELA Q ++ LG M V C GGT +R+DI +L +
Sbjct: 122 CNTHKNFIQGLILVPTRELALQTSAMIKELGKHMKVQCMVTTGGTSLREDIMRLYNVVHI 181
Query: 169 VVGTPGRVFDMISRGALSTKQIRMFVLDEADEMLSRGFKDQIYDVFKHLNNDVQVILLSA 228
+ GTPGR+ D+ ++ + + V+DEAD++LS F+ + ++ K L + Q+++ SA
Sbjct: 182 LCGTPGRILDLANKDVANLSGCHIMVMDEADKLLSPEFQPIVEELMKFLPKEKQILMYSA 241
Query: 229 TMPADVLDVSMKFMRDPIKILVKKEELTLE 258
T P V + ++ D +I + +ELTL+
Sbjct: 242 TFPVTVKEFRAIYLSDAHEINLM-DELTLK 270
>UNIPROTKB|Q65N62 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:279010 "Bacillus licheniformis DSM 13 = ATCC 14580"
[GO:0003723 "RNA binding" evidence=ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] [GO:0005524 "ATP binding"
evidence=ISS] [GO:0043590 "bacterial nucleoid" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005737 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043590
HOGENOM:HOG000268810 OMA:IIDHINR HSSP:Q58083 EMBL:AE017333
EMBL:CP000002 RefSeq:YP_006711973.1 RefSeq:YP_077785.1
ProteinModelPortal:Q65N62 STRING:Q65N62 DNASU:3098967
EnsemblBacteria:EBBACT00000055567 EnsemblBacteria:EBBACT00000059427
GeneID:3030407 GeneID:3098967 GenomeReviews:AE017333_GR
GenomeReviews:CP000002_GR KEGG:bld:BLi00546 KEGG:bli:BL02197
PATRIC:18946609 ProtClustDB:CLSK886742
BioCyc:BLIC279010:GJ2P-538-MONOMER Uniprot:Q65N62
Length = 487
Score = 378 (138.1 bits), Expect = 6.5e-35, P = 6.5e-35
Identities = 78/209 (37%), Positives = 124/209 (59%)
Query: 49 FDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGNDVIAQAQSGTGKTATFSISILQQ 108
F D +LS +L + I GFE+ + IQ + I + DVI QAQ+GTGKTA F I ++++
Sbjct: 5 FQDFQLSSDLTKAIKRMGFEEATPIQAQTIPLGLANKDVIGQAQTGTGKTAAFGIPLVEK 64
Query: 109 VDQNIKECQALILAPTRELAQQIQKVVIALGDFMSVSCHACIGGTIVRDDIRKLEAGAQV 168
++ QA+++APTRELA Q+ + + +G GG + IR L+ +
Sbjct: 65 INPESPNIQAIVIAPTRELAIQVSEELYKIGQDKRARVLPIYGGQDIGRQIRALKKNPHI 124
Query: 169 VVGTPGRVFDMISRGALSTKQIRMFVLDEADEMLSRGFKDQIYDVFKHLNNDVQVILLSA 228
+VGTPGR+ D I+R + + + VLDEADEML+ GF + I + ++ + Q +L SA
Sbjct: 125 IVGTPGRLLDHINRRTMRLQTVNTVVLDEADEMLNMGFIEDIESILSNVPAEHQTLLFSA 184
Query: 229 TMPADVLDVSMKFMRDPIKILVKKEELTL 257
TMPA + ++ +FM +P + VK +E+T+
Sbjct: 185 TMPAPIKRIAERFMTNPEHVKVKAKEMTV 213
>TIGR_CMR|GSU_0914 [details] [associations]
symbol:GSU_0914 "ATP-dependent RNA helicase RhlE"
species:243231 "Geobacter sulfurreducens PCA" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:AE017180
GenomeReviews:AE017180_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 KO:K11927 OMA:KHRAKRV RefSeq:NP_951968.1
ProteinModelPortal:Q74EP8 GeneID:2687174 KEGG:gsu:GSU0914
PATRIC:22024603 ProtClustDB:CLSK924451
BioCyc:GSUL243231:GH27-925-MONOMER Uniprot:Q74EP8
Length = 447
Score = 374 (136.7 bits), Expect = 1.7e-34, P = 1.7e-34
Identities = 80/191 (41%), Positives = 116/191 (60%)
Query: 61 GIYAYGFEKPSAIQQRAIIPCVRGNDVIAQAQSGTGKTATFSISILQQVDQNIK-ECQAL 119
GI A G+E P+ IQ +AI + G DV+ AQ+GTGKTA F++ IL ++ Q + +AL
Sbjct: 15 GIAAAGYETPTPIQAQAIPAVMAGRDVMGLAQTGTGKTAAFALPILHRLQQGERGRVRAL 74
Query: 120 ILAPTRELAQQIQKVVIALGDFMSVSCHACIGGTIVRDDIRKLEAGAQVVVGTPGRVFDM 179
++APTRELA+QI + LG + GG V ++KL+AGA+VVV PGR+ D
Sbjct: 75 VIAPTRELAEQINDSFVTLGRQTRLRSVTVYGGVGVNPQVQKLKAGAEVVVACPGRLLDH 134
Query: 180 ISRGALSTKQIRMFVLDEADEMLSRGFKDQIYDVFKHLNNDVQVILLSATMPADVLDVSM 239
I++G + ++ + VLDEAD+M GF I V KHL Q +L SATMP D+ ++
Sbjct: 135 IAQGTIDLSRLEVLVLDEADQMFDMGFLPDIRRVLKHLPPRRQTLLFSATMPIDIRTLAQ 194
Query: 240 KFMRDPIKILV 250
+ DP+ + V
Sbjct: 195 DILVDPVTVQV 205
>UNIPROTKB|P0A9P6 [details] [associations]
symbol:deaD "DeaD, DEAD-box RNA helicase" species:83333
"Escherichia coli K-12" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0030684 "preribosome" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0000027 "ribosomal large
subunit assembly" evidence=IMP] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=IDA] [GO:0006401 "RNA catabolic
process" evidence=IGI] [GO:0003724 "RNA helicase activity"
evidence=IDA] [GO:0070417 "cellular response to cold"
evidence=IEP;IMP] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR021046 Pfam:PF00270 Pfam:PF00271 Pfam:PF12343
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR EMBL:U18997 GO:GO:0003723 GO:GO:0006401
GO:GO:0070417 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 GO:GO:0000027 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268810 KO:K05592 InterPro:IPR005580
Pfam:PF03880 EMBL:M63288 EMBL:U03750 PIR:F65106 RefSeq:NP_417631.2
RefSeq:YP_491349.1 ProteinModelPortal:P0A9P6 SMR:P0A9P6
DIP:DIP-35752N IntAct:P0A9P6 MINT:MINT-1219396 SWISS-2DPAGE:P0A9P6
PaxDb:P0A9P6 PRIDE:P0A9P6 EnsemblBacteria:EBESCT00000000679
EnsemblBacteria:EBESCT00000014242 GeneID:12933435 GeneID:947674
KEGG:ecj:Y75_p3084 KEGG:eco:b3162 PATRIC:32121742 EchoBASE:EB0211
EcoGene:EG10215 OMA:ILFMTPR ProtClustDB:PRK11634
BioCyc:EcoCyc:EG10215-MONOMER BioCyc:ECOL316407:JW5531-MONOMER
Genevestigator:P0A9P6 GO:GO:0030684 Uniprot:P0A9P6
Length = 629
Score = 379 (138.5 bits), Expect = 1.8e-34, P = 1.8e-34
Identities = 81/209 (38%), Positives = 118/209 (56%)
Query: 49 FDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGNDVIAQAQSGTGKTATFSISILQQ 108
F D+ L +L + G+EKPS IQ I + G DV+ AQ+G+GKTA FS+ +LQ
Sbjct: 8 FADLGLKAPILEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAFSLPLLQN 67
Query: 109 VDQNIKECQALILAPTRELAQQIQKVVIALGDFM-SVSCHACIGGTIVRDDIRKLEAGAQ 167
+D +K Q L+LAPTRELA Q+ + + M V+ A GG +R L G Q
Sbjct: 68 LDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLRALRQGPQ 127
Query: 168 VVVGTPGRVFDMISRGALSTKQIRMFVLDEADEMLSRGFKDQIYDVFKHLNNDVQVILLS 227
+VVGTPGR+ D + RG L ++ VLDEADEML GF + + + + Q L S
Sbjct: 128 IVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLRMGFIEDVETIMAQIPEGHQTALFS 187
Query: 228 ATMPADVLDVSMKFMRDPIKILVKKEELT 256
ATMP + ++ +FM++P ++ ++ T
Sbjct: 188 ATMPEAIRRITRRFMKEPQEVRIQSSVTT 216
>SGD|S000005572 [details] [associations]
symbol:DBP5 "Cytoplasmic ATP-dependent RNA helicase of the
DEAD-box family" species:4932 "Saccharomyces cerevisiae"
[GO:0044614 "nuclear pore cytoplasmic filaments" evidence=IDA]
[GO:0005934 "cellular bud tip" evidence=IDA] [GO:0005643 "nuclear
pore" evidence=IEA;IPI] [GO:0005737 "cytoplasm" evidence=IEA;IDA]
[GO:0031965 "nuclear membrane" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008186
"RNA-dependent ATPase activity" evidence=IDA] [GO:0006406 "mRNA
export from nucleus" evidence=IGI;IMP] [GO:0003724 "RNA helicase
activity" evidence=ISS;IDA] [GO:0005844 "polysome" evidence=IDA]
[GO:0006415 "translational termination" evidence=IGI;IPI]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;IDA]
[GO:0006810 "transport" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0051028 "mRNA
transport" evidence=IEA] [GO:0000822 "inositol hexakisphosphate
binding" evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 SGD:S000005572 GO:GO:0005524
GO:GO:0005737 EMBL:BK006948 GO:GO:0005934 GO:GO:0015031
GO:GO:0031965 GO:GO:0003723 GO:GO:0006406 GO:GO:0005844
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 KO:K01529
GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 OMA:PQAICLA OrthoDB:EOG4B2X5R
EMBL:U28135 EMBL:Z74954 EMBL:Z74955 PIR:S66920 RefSeq:NP_014689.1
PDB:2KBE PDB:2KBF PDB:3GFP PDB:3PEU PDB:3PEV PDB:3PEW PDB:3PEY
PDB:3RRM PDB:3RRN PDBsum:2KBE PDBsum:2KBF PDBsum:3GFP PDBsum:3PEU
PDBsum:3PEV PDBsum:3PEW PDBsum:3PEY PDBsum:3RRM PDBsum:3RRN
ProteinModelPortal:P20449 SMR:P20449 DIP:DIP-2352N IntAct:P20449
MINT:MINT-488024 STRING:P20449 PaxDb:P20449 PeptideAtlas:P20449
EnsemblFungi:YOR046C GeneID:854211 KEGG:sce:YOR046C CYGD:YOR046c
GeneTree:ENSGT00530000063236 EvolutionaryTrace:P20449
NextBio:976065 Genevestigator:P20449 GermOnline:YOR046C
GO:GO:0044614 GO:GO:0008186 GO:GO:0006415 Uniprot:P20449
Length = 482
Score = 371 (135.7 bits), Expect = 3.6e-34, P = 3.6e-34
Identities = 89/218 (40%), Positives = 136/218 (62%)
Query: 46 AENFDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGN---DVIAQAQSGTGKTATFS 102
A++FD++ L+ ELL+GIYA F+KPS IQ+RA+ P + N ++IAQ+QSGTGKTA FS
Sbjct: 91 AKSFDELGLAPELLKGIYAMKFQKPSKIQERAL-PLLLHNPPRNMIAQSQSGTGKTAAFS 149
Query: 103 ISILQQVDQNIKECQALILAPTRELAQQIQKVVIALGDFMSVSCHACIGGTIVRDDIRK- 161
+++L +V+ QA+ LAP+RELA+Q +VV +G F ++ IV D K
Sbjct: 150 LTMLTRVNPEDASPQAICLAPSRELARQTLEVVQEMGKFTKITSQL-----IVPDSFEKN 204
Query: 162 LEAGAQVVVGTPGRVFDMISRGALSTKQIRMFVLDEADEMLSR-GFKDQIYDVFKHLNND 220
+ AQV+VGTPG V D++ R + ++I++FVLDEAD ML + G DQ V + L D
Sbjct: 205 KQINAQVIVGTPGTVLDLMRRKLMQLQKIKIFVLDEADNMLDQQGLGDQCIRVKRFLPKD 264
Query: 221 VQVILLSATMPADVLDVSMKFMRDPIKILVKKEELTLE 258
Q++L SAT V + K + + + ++ E+ ++
Sbjct: 265 TQLVLFSATFADAVRQYAKKIVPNANTLELQTNEVNVD 302
>UNIPROTKB|Q5ZHZ0 [details] [associations]
symbol:DDX39B "Spliceosome RNA helicase DDX39B"
species:9031 "Gallus gallus" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005681 "spliceosomal
complex" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0051028 "mRNA
transport" evidence=IEA] [GO:0016607 "nuclear speck" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0008380
GO:GO:0016607 GO:GO:0006397 GO:GO:0005681 GO:GO:0003723
GO:GO:0051028 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107334
EMBL:AJ720994 IPI:IPI00585240 ProteinModelPortal:Q5ZHZ0 SMR:Q5ZHZ0
Uniprot:Q5ZHZ0
Length = 428
Score = 368 (134.6 bits), Expect = 7.4e-34, P = 7.4e-34
Identities = 96/262 (36%), Positives = 138/262 (52%)
Query: 1 MAEQRGDN-WEDPKNGPAENEAEQPAYNGPPGMAVDGLIETNWDHVAENFDDMELSEELL 59
MAE DN D + EN A PP V G + H + F D L ELL
Sbjct: 1 MAENDVDNELLDYEEDEVENAAGGDGSEAPPKKDVKGSYVSI--H-SSGFRDFLLKPELL 57
Query: 60 RGIYAYGFEKPSAIQQRAIIPCVRGNDVIAQAQSGTGKTATFSISILQQVDQNIKECQAL 119
R I GFE PS +Q I + G DV+ QA+SG GKTA F ++ LQQ++ + L
Sbjct: 58 RAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQVSVL 117
Query: 120 ILAPTRELAQQIQKVVIALGDFM-SVSCHACIGGTIVRDDIRKLEAGA-QVVVGTPGRVF 177
++ TRELA QI K +M SV GG V+ D L+ +VVGTPGR+
Sbjct: 118 VMCHTRELAFQISKEYERFSKYMPSVKVAVFFGGLAVKKDEEVLKKNCPHIVVGTPGRIL 177
Query: 178 DMISRGALSTKQIRMFVLDEADEMLSR-GFKDQIYDVFKHLNNDVQVILLSATMPADVLD 236
+ +L+ K I+ F+LDE D+ML + + + ++F+ ++ QV++ SAT+ ++
Sbjct: 178 ALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIRP 237
Query: 237 VSMKFMRDPIKILVKKE-ELTL 257
V KFM+DP++I V E +LTL
Sbjct: 238 VCRKFMQDPMEIFVDDETKLTL 259
>UNIPROTKB|Q9KLE2 [details] [associations]
symbol:VC_A0804 "ATP-dependent RNA helicase DeaD"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0000910 "cytokinesis" evidence=ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] [GO:0016070 "RNA metabolic
process" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
GO:GO:0000910 EMBL:AE003853 GenomeReviews:AE003853_GR GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
InterPro:IPR014014 PROSITE:PS51195 KO:K05592 InterPro:IPR005580
Pfam:PF03880 HSSP:P10081 OMA:ILFMTPR PIR:C82415 RefSeq:NP_233190.1
ProteinModelPortal:Q9KLE2 DNASU:2612819 GeneID:2612819
KEGG:vch:VCA0804 PATRIC:20086156 ProtClustDB:CLSK789062
Uniprot:Q9KLE2
Length = 663
Score = 373 (136.4 bits), Expect = 1.0e-33, P = 1.0e-33
Identities = 79/201 (39%), Positives = 120/201 (59%)
Query: 46 AENFDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGNDVIAQAQSGTGKTATFSISI 105
A F D+ L+ +L + GF P+ IQ AI + G D + +AQ+GTGKTA FS+ +
Sbjct: 25 AIQFSDLALNSAILSALTEMGFVSPTPIQAAAIPVLLEGRDALGKAQTGTGKTAAFSLPL 84
Query: 106 LQQVDQNIKECQALILAPTRELAQQIQKVVIALG-DFMSVSCHACIGGTIVRDDIRKLEA 164
L +++ + + QA+++APTRELA Q+ + LG + + GG + D +R L++
Sbjct: 85 LNKLNLSQYKPQAIVMAPTRELAIQVAAEIKNLGQNIKGLKVLEIYGGASILDQMRALKS 144
Query: 165 GAQVVVGTPGRVFDMISRGALSTKQIRMFVLDEADEMLSRGFKDQIYDVFKHLNNDVQVI 224
GA +VVGTPGRV D+I+R L + F+LDEADEML GF D + + + Q +
Sbjct: 145 GAHIVVGTPGRVKDLITRDRLHLDECHTFILDEADEMLKMGFVDDVTWIMEQAPESAQRV 204
Query: 225 LLSATMPADVLDVSMKFMRDP 245
L SATMP V ++ +F+R+P
Sbjct: 205 LFSATMPPMVKEIVERFLRNP 225
>TIGR_CMR|VC_A0804 [details] [associations]
symbol:VC_A0804 "ATP-dependent RNA helicase DeaD"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0016070 "RNA metabolic process"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
GO:GO:0000910 EMBL:AE003853 GenomeReviews:AE003853_GR GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
InterPro:IPR014014 PROSITE:PS51195 KO:K05592 InterPro:IPR005580
Pfam:PF03880 HSSP:P10081 OMA:ILFMTPR PIR:C82415 RefSeq:NP_233190.1
ProteinModelPortal:Q9KLE2 DNASU:2612819 GeneID:2612819
KEGG:vch:VCA0804 PATRIC:20086156 ProtClustDB:CLSK789062
Uniprot:Q9KLE2
Length = 663
Score = 373 (136.4 bits), Expect = 1.0e-33, P = 1.0e-33
Identities = 79/201 (39%), Positives = 120/201 (59%)
Query: 46 AENFDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGNDVIAQAQSGTGKTATFSISI 105
A F D+ L+ +L + GF P+ IQ AI + G D + +AQ+GTGKTA FS+ +
Sbjct: 25 AIQFSDLALNSAILSALTEMGFVSPTPIQAAAIPVLLEGRDALGKAQTGTGKTAAFSLPL 84
Query: 106 LQQVDQNIKECQALILAPTRELAQQIQKVVIALG-DFMSVSCHACIGGTIVRDDIRKLEA 164
L +++ + + QA+++APTRELA Q+ + LG + + GG + D +R L++
Sbjct: 85 LNKLNLSQYKPQAIVMAPTRELAIQVAAEIKNLGQNIKGLKVLEIYGGASILDQMRALKS 144
Query: 165 GAQVVVGTPGRVFDMISRGALSTKQIRMFVLDEADEMLSRGFKDQIYDVFKHLNNDVQVI 224
GA +VVGTPGRV D+I+R L + F+LDEADEML GF D + + + Q +
Sbjct: 145 GAHIVVGTPGRVKDLITRDRLHLDECHTFILDEADEMLKMGFVDDVTWIMEQAPESAQRV 204
Query: 225 LLSATMPADVLDVSMKFMRDP 245
L SATMP V ++ +F+R+P
Sbjct: 205 LFSATMPPMVKEIVERFLRNP 225
>UNIPROTKB|O00148 [details] [associations]
symbol:DDX39A "ATP-dependent RNA helicase DDX39A"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0006406 "mRNA export from
nucleus" evidence=IGI] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IGI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0003676
GO:GO:0006406 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 EMBL:U90426 EMBL:AK026614 EMBL:BC001009
IPI:IPI00940237 RefSeq:NP_005795.2 UniGene:Hs.311609
ProteinModelPortal:O00148 SMR:O00148 IntAct:O00148
MINT:MINT-1035991 STRING:O00148 PhosphoSite:O00148 PaxDb:O00148
PeptideAtlas:O00148 PRIDE:O00148 DNASU:10212
Ensembl:ENST00000242776 GeneID:10212 KEGG:hsa:10212 UCSC:uc002myo.3
CTD:10212 GeneCards:GC19M014521 HGNC:HGNC:17821 neXtProt:NX_O00148
PharmGKB:PA27226 HOVERGEN:HBG107334 InParanoid:O00148 KO:K13182
OrthoDB:EOG4XSKPX PhylomeDB:O00148 ChiTaRS:DDX39A GenomeRNAi:10212
NextBio:38664 ArrayExpress:O00148 Bgee:O00148 CleanEx:HS_DDX39
Genevestigator:O00148 GermOnline:ENSG00000123136 Uniprot:O00148
Length = 427
Score = 364 (133.2 bits), Expect = 2.0e-33, P = 2.0e-33
Identities = 93/261 (35%), Positives = 139/261 (53%)
Query: 1 MAEQRGDNWEDPKNGPAENEAEQPAYNGPPGMAVDGLIETNWDHVAENFDDMELSEELLR 60
MAEQ +N + E +A Q + PP + G + H + F D L ELLR
Sbjct: 1 MAEQDVENDLLDYDEEEEPQAPQESTPAPPKKDIKGSYVSI--H-SSGFRDFLLKPELLR 57
Query: 61 GIYAYGFEKPSAIQQRAIIPCVRGNDVIAQAQSGTGKTATFSISILQQVDQNIKECQALI 120
I GFE PS +Q I + G DV+ QA+SG GKTA F ++ LQQ++ + L+
Sbjct: 58 AIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQIEPVNGQVTVLV 117
Query: 121 LAPTRELAQQIQKVVIALGDFM-SVSCHACIGGTIVRDDIRKLEAGA-QVVVGTPGRVFD 178
+ TRELA QI K +M SV GG ++ D L+ VVVGTPGR+
Sbjct: 118 MCHTRELAFQISKEYERFSKYMPSVKVSVFFGGLSIKKDEEVLKKNCPHVVVGTPGRILA 177
Query: 179 MISRGALSTKQIRMFVLDEADEMLSR-GFKDQIYDVFKHLNNDVQVILLSATMPADVLDV 237
++ + S K ++ FVLDE D+ML + + + ++F+ ++ Q ++ SAT+ D+ V
Sbjct: 178 LVRNRSFSLKNVKHFVLDECDKMLEQLDMRRDVQEIFRLTPHEKQCMMFSATLSKDIRPV 237
Query: 238 SMKFMRDPIKILVKKE-ELTL 257
KFM+DP+++ V E +LTL
Sbjct: 238 CRKFMQDPMEVFVDDETKLTL 258
>UNIPROTKB|Q8N5M0 [details] [associations]
symbol:DDX39A "ATP-dependent RNA helicase DDX39A"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR011545
Pfam:PF00270 GO:GO:0005524 GO:GO:0003676 EMBL:CH471106
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
UniGene:Hs.311609 HGNC:HGNC:17821 ChiTaRS:DDX39A EMBL:AC008569
HOVERGEN:HBG072062 EMBL:BC032128 IPI:IPI00166874 SMR:Q8N5M0
IntAct:Q8N5M0 STRING:Q8N5M0 Ensembl:ENST00000324340 Uniprot:Q8N5M0
Length = 322
Score = 364 (133.2 bits), Expect = 2.0e-33, P = 2.0e-33
Identities = 93/261 (35%), Positives = 139/261 (53%)
Query: 1 MAEQRGDNWEDPKNGPAENEAEQPAYNGPPGMAVDGLIETNWDHVAENFDDMELSEELLR 60
MAEQ +N + E +A Q + PP + G + H + F D L ELLR
Sbjct: 1 MAEQDVENDLLDYDEEEEPQAPQESTPAPPKKDIKGSYVSI--H-SSGFRDFLLKPELLR 57
Query: 61 GIYAYGFEKPSAIQQRAIIPCVRGNDVIAQAQSGTGKTATFSISILQQVDQNIKECQALI 120
I GFE PS +Q I + G DV+ QA+SG GKTA F ++ LQQ++ + L+
Sbjct: 58 AIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQIEPVNGQVTVLV 117
Query: 121 LAPTRELAQQIQKVVIALGDFM-SVSCHACIGGTIVRDDIRKLEAGA-QVVVGTPGRVFD 178
+ TRELA QI K +M SV GG ++ D L+ VVVGTPGR+
Sbjct: 118 MCHTRELAFQISKEYERFSKYMPSVKVSVFFGGLSIKKDEEVLKKNCPHVVVGTPGRILA 177
Query: 179 MISRGALSTKQIRMFVLDEADEMLSR-GFKDQIYDVFKHLNNDVQVILLSATMPADVLDV 237
++ + S K ++ FVLDE D+ML + + + ++F+ ++ Q ++ SAT+ D+ V
Sbjct: 178 LVRNRSFSLKNVKHFVLDECDKMLEQLDMRRDVQEIFRLTPHEKQCMMFSATLSKDIRPV 237
Query: 238 SMKFMRDPIKILVKKE-ELTL 257
KFM+DP+++ V E +LTL
Sbjct: 238 CRKFMQDPMEVFVDDETKLTL 258
>ZFIN|ZDB-GENE-030131-4275 [details] [associations]
symbol:ddx39aa "DEAD (Asp-Glu-Ala-Asp) box
polypeptide 39Aa" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-030131-4275 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107334 EMBL:BC071505
IPI:IPI00510085 UniGene:Dr.1111 ProteinModelPortal:Q6IQA5
SMR:Q6IQA5 STRING:Q6IQA5 PRIDE:Q6IQA5 InParanoid:Q6IQA5
ArrayExpress:Q6IQA5 Bgee:Q6IQA5 Uniprot:Q6IQA5
Length = 427
Score = 364 (133.2 bits), Expect = 2.0e-33, P = 2.0e-33
Identities = 90/247 (36%), Positives = 134/247 (54%)
Query: 18 ENEAEQPAYNGPPGMAVDGLIETNWDHVA---ENFDDMELSEELLRGIYAYGFEKPSAIQ 74
E+E QP + G A G E +V+ F D L ELLR I GFE PS +Q
Sbjct: 15 EDEEPQPTVDS--G-ATTGKKEVKGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQ 71
Query: 75 QRAIIPCVRGNDVIAQAQSGTGKTATFSISILQQVDQNIKECQALILAPTRELAQQIQKV 134
I + G D++ QA+SG GKTA F ++ LQQ++ + L++ TRELA QI K
Sbjct: 72 HECIPQAILGMDILCQAKSGMGKTAVFVLATLQQIEPVDGQVSVLVMCHTRELAFQISKE 131
Query: 135 VIALGDFMS-VSCHACIGGTIVRDDIRKLEAGA-QVVVGTPGRVFDMISRGALSTKQIRM 192
+MS V C A GG ++ D L+ +VVGTPGR+ + L+ K ++
Sbjct: 132 YERFSKYMSSVKCAAFFGGMSIKKDEDVLKKNCPHIVVGTPGRILALSRNKTLTLKNVKH 191
Query: 193 FVLDEADEMLSR-GFKDQIYDVFKHLNNDVQVILLSATMPADVLDVSMKFMRDPIKILVK 251
FVLDE D+ML + + + D+F+ ++ Q ++ SAT+ ++ V KFM+DP+++ V
Sbjct: 192 FVLDECDKMLEQLDMRRDVQDIFRLTPHEKQCMMFSATLSKEIRPVCRKFMQDPMEVFVD 251
Query: 252 KE-ELTL 257
E +LTL
Sbjct: 252 DETKLTL 258
>UNIPROTKB|F1PXG6 [details] [associations]
symbol:DDX20 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00530000062880 EMBL:AAEX03011088 EMBL:AAEX03011089
Ensembl:ENSCAFT00000021679 Uniprot:F1PXG6
Length = 825
Score = 373 (136.4 bits), Expect = 2.1e-33, P = 2.1e-33
Identities = 94/246 (38%), Positives = 138/246 (56%)
Query: 15 GPAENEAEQPAYNGPPGMAVDGLIETNWDHVAENFDDMELSEELLRGIYAYGFEKPSAIQ 74
GPA + +GP D L+ D F+ + LS +L G+ A GFE+PS +Q
Sbjct: 37 GPARSLRTAHDVSGPRARTGDVLLAEPAD-----FESLLLSRPVLDGLRAAGFERPSPVQ 91
Query: 75 QRAIIPCVR-GNDVIAQAQSGTGKTATFSISILQQVDQNIKECQALILAPTRELAQQIQK 133
+AI P R G D+I QA+SGTGKT FS L + + Q LILAPTRE+A QI
Sbjct: 92 LKAI-PLGRCGLDLIVQAKSGTGKTCVFSTIALDSLVLENQSTQILILAPTREIAVQIHS 150
Query: 134 VVIALGDFMS-VSCHACIGGTIVRDDIRKLEAGAQVVVGTPGRVFDMISRGALSTKQIRM 192
V+ A+G M + CH IGGT + D +L+ + VG+PGR+ +I L+ IR+
Sbjct: 151 VITAIGIKMEGLECHVFIGGTPLSQDKTRLKK-CHIAVGSPGRIKQLIELDYLNPGSIRL 209
Query: 193 FVLDEADEMLSRG-FKDQIYDVFKHLNNDVQVILLSATMPADVLDVSMKFMRDPIKILVK 251
F+LDEAD++L G F++QI ++ L Q++ +SAT P + + K+MRDP + +
Sbjct: 210 FILDEADKLLEEGSFQEQINWIYSSLPASKQMLAVSATYPEFLANALTKYMRDPTFVRLN 269
Query: 252 KEELTL 257
+ +L
Sbjct: 270 SSDPSL 275
>UNIPROTKB|J9P828 [details] [associations]
symbol:DDX20 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 OMA:VEDYEHY
GeneTree:ENSGT00530000062880 EMBL:AAEX03011088 EMBL:AAEX03011089
Ensembl:ENSCAFT00000050085 Uniprot:J9P828
Length = 825
Score = 373 (136.4 bits), Expect = 2.1e-33, P = 2.1e-33
Identities = 94/246 (38%), Positives = 138/246 (56%)
Query: 15 GPAENEAEQPAYNGPPGMAVDGLIETNWDHVAENFDDMELSEELLRGIYAYGFEKPSAIQ 74
GPA + +GP D L+ D F+ + LS +L G+ A GFE+PS +Q
Sbjct: 37 GPARSLRTAHDVSGPRARTGDVLLAEPAD-----FESLLLSRPVLDGLRAAGFERPSPVQ 91
Query: 75 QRAIIPCVR-GNDVIAQAQSGTGKTATFSISILQQVDQNIKECQALILAPTRELAQQIQK 133
+AI P R G D+I QA+SGTGKT FS L + + Q LILAPTRE+A QI
Sbjct: 92 LKAI-PLGRCGLDLIVQAKSGTGKTCVFSTIALDSLVLENQSTQILILAPTREIAVQIHS 150
Query: 134 VVIALGDFMS-VSCHACIGGTIVRDDIRKLEAGAQVVVGTPGRVFDMISRGALSTKQIRM 192
V+ A+G M + CH IGGT + D +L+ + VG+PGR+ +I L+ IR+
Sbjct: 151 VITAIGIKMEGLECHVFIGGTPLSQDKTRLKK-CHIAVGSPGRIKQLIELDYLNPGSIRL 209
Query: 193 FVLDEADEMLSRG-FKDQIYDVFKHLNNDVQVILLSATMPADVLDVSMKFMRDPIKILVK 251
F+LDEAD++L G F++QI ++ L Q++ +SAT P + + K+MRDP + +
Sbjct: 210 FILDEADKLLEEGSFQEQINWIYSSLPASKQMLAVSATYPEFLANALTKYMRDPTFVRLN 269
Query: 252 KEELTL 257
+ +L
Sbjct: 270 SSDPSL 275
>TIGR_CMR|CPS_1125 [details] [associations]
symbol:CPS_1125 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 KO:K11927 RefSeq:YP_267868.1
ProteinModelPortal:Q486Z7 STRING:Q486Z7 GeneID:3520292
KEGG:cps:CPS_1125 PATRIC:21465509 OMA:AYSKYLR
BioCyc:CPSY167879:GI48-1206-MONOMER Uniprot:Q486Z7
Length = 466
Score = 362 (132.5 bits), Expect = 3.2e-33, P = 3.2e-33
Identities = 81/216 (37%), Positives = 123/216 (56%)
Query: 49 FDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGNDVIAQAQSGTGKTATFSISILQQ 108
F D+ LSE LL+ + G+E PS IQ +AI + G DV+A AQ+GTGKTA F++ +LQ+
Sbjct: 8 FTDLGLSEALLKAVRDKGYETPSPIQAQAIPAVISGRDVMAAAQTGTGKTAGFTLPLLQR 67
Query: 109 VDQN------IKECQALILAPTRELAQQIQKVVIALGDFMSVSCHACIGGTIVRDDIRKL 162
+ + +ALIL PTRELA QI + + G ++++ GG + I +L
Sbjct: 68 LSSSKGNKVSSNNVRALILTPTRELAAQISESIEVYGKYLNLHSMVVFGGVKINPQIARL 127
Query: 163 EAGAQVVVGTPGRVFDMISRGALSTKQIRMFVLDEADEMLSRGFKDQIYDVFKHLNNDVQ 222
G V+V TPGR+ D+ ++ A+ Q+ +F+LDEAD ML GF I + L D Q
Sbjct: 128 RQGVDVLVATPGRLLDLYNQRAVKFSQLEVFILDEADRMLDMGFIRDIKKLMTALPKDRQ 187
Query: 223 VILLSATMPADVLDVSMKFMRDPIKILVKKEELTLE 258
+L SAT ++ ++ + +P++I V E T E
Sbjct: 188 NLLFSATFSPEIRALAKGMVNNPLEISVDAENSTAE 223
>TAIR|locus:2147987 [details] [associations]
symbol:UAP56a "homolog of human UAP56 a" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA;ISS] [GO:0005730 "nucleolus" evidence=IDA] [GO:0046686
"response to cadmium ion" evidence=IEP] [GO:0005829 "cytosol"
evidence=RCA] [GO:0009506 "plasmodesma" evidence=IDA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0009506
GO:GO:0005524 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046686
GO:GO:0005730 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 EMBL:AL360314 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 EMBL:AJ010466 EMBL:AY052303
EMBL:BT001052 EMBL:AK221273 EMBL:AK221708 EMBL:AK226428
IPI:IPI00760330 IPI:IPI00760336 IPI:IPI00760344 PIR:T51343
RefSeq:NP_568244.2 RefSeq:NP_568245.1 UniGene:At.49007
UniGene:At.73904 ProteinModelPortal:Q56XG6 SMR:Q56XG6 IntAct:Q56XG6
STRING:Q56XG6 PRIDE:Q56XG6 EnsemblPlants:AT5G11170.1
EnsemblPlants:AT5G11200.1 GeneID:830986 GeneID:830990
KEGG:ath:AT5G11170 KEGG:ath:AT5G11200 GeneFarm:932 TAIR:At5g11170
InParanoid:Q56XG6 PhylomeDB:Q56XG6 ProtClustDB:CLSN2689601
Genevestigator:Q56XG6 Uniprot:Q56XG6
Length = 427
Score = 361 (132.1 bits), Expect = 4.1e-33, P = 4.1e-33
Identities = 87/217 (40%), Positives = 122/217 (56%)
Query: 46 AENFDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGNDVIAQAQSGTGKTATFSISI 105
+ F D L ELLR I GFE PS +Q I + G DVI QA+SG GKTA F +S
Sbjct: 45 SSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLST 104
Query: 106 LQQVDQNIKECQALILAPTRELAQQIQKVVIALGDFM-SVSCHACIGGTIVR--DDIRKL 162
LQQ++ + + AL+L TRELA QI + ++ GG ++ D+ K
Sbjct: 105 LQQIEPSPGQVSALVLCHTRELAYQICNEFVRFSTYLPDTKVSVFYGGVNIKIHKDLLKN 164
Query: 163 EAGAQVVVGTPGRVFDMISRGALSTKQIRMFVLDEADEML-SRGFKDQIYDVFKHLNNDV 221
E +VVGTPGRV + LS K +R F+LDE D+ML S + + ++FK +D
Sbjct: 165 EC-PHIVVGTPGRVLALAREKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDK 223
Query: 222 QVILLSATMPADVLDVSMKFMRDPIKILVKKE-ELTL 257
QV++ SAT+ ++ V KFM+DP++I V E +LTL
Sbjct: 224 QVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTL 260
>UNIPROTKB|Q81JK1 [details] [associations]
symbol:BAS5307 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:1392 "Bacillus anthracis" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 HOGENOM:HOG000268809
InterPro:IPR005580 Pfam:PF03880 OMA:ENRFLEE RefSeq:NP_847849.1
RefSeq:YP_022388.1 RefSeq:YP_031544.1 ProteinModelPortal:Q81JK1
SMR:Q81JK1 IntAct:Q81JK1 DNASU:1085452
EnsemblBacteria:EBBACT00000008202 EnsemblBacteria:EBBACT00000014623
EnsemblBacteria:EBBACT00000021322 GeneID:1085452 GeneID:2819774
GeneID:2852974 KEGG:ban:BA_5703 KEGG:bar:GBAA_5703 KEGG:bat:BAS5307
ProtClustDB:CLSK883265 BioCyc:BANT260799:GJAJ-5380-MONOMER
BioCyc:BANT261594:GJ7F-5556-MONOMER Uniprot:Q81JK1
Length = 481
Score = 360 (131.8 bits), Expect = 5.2e-33, P = 5.2e-33
Identities = 75/212 (35%), Positives = 124/212 (58%)
Query: 47 ENFDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGNDVIAQAQSGTGKTATFSISIL 106
++F + LS+E+ R + G+E P+ +Q I ++ D++ ++Q+G+GKTA+F I +
Sbjct: 4 KSFSNYALSKEVRRALTGLGYEHPTEVQGEVIPVALQKKDLVVKSQTGSGKTASFGIPLC 63
Query: 107 QQVDQNIKECQALILAPTRELAQQIQKVVIALGDFMSVSCHACIGGTIVRDDIRKLEAGA 166
+ V+ + QAL+L PTRELA Q+++ + +G F + A G + +L+
Sbjct: 64 EMVEWEENKPQALVLTPTRELAVQVKEDITNIGRFKRIKAAAIYGKSPFARQKLELKQKT 123
Query: 167 QVVVGTPGRVFDMISRGALSTKQIRMFVLDEADEMLSRGFKDQIYDVFKHLNNDVQVILL 226
+VVGTPGRV D I +G LS ++++ V+DEADEML+ GF DQ+ + L +L
Sbjct: 124 HIVVGTPGRVLDHIEKGTLSLERLKYLVIDEADEMLNMGFIDQVEAIIDELPTKRMTMLF 183
Query: 227 SATMPADVLDVSMKFMRDPIKILVKKEELTLE 258
SAT+P DV +S +M P I +K +T +
Sbjct: 184 SATLPEDVERLSRTYMNAPTHIEIKAAGITTD 215
>TIGR_CMR|BA_5703 [details] [associations]
symbol:BA_5703 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:198094 "Bacillus anthracis str. Ames" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 HOGENOM:HOG000268809
InterPro:IPR005580 Pfam:PF03880 OMA:ENRFLEE RefSeq:NP_847849.1
RefSeq:YP_022388.1 RefSeq:YP_031544.1 ProteinModelPortal:Q81JK1
SMR:Q81JK1 IntAct:Q81JK1 DNASU:1085452
EnsemblBacteria:EBBACT00000008202 EnsemblBacteria:EBBACT00000014623
EnsemblBacteria:EBBACT00000021322 GeneID:1085452 GeneID:2819774
GeneID:2852974 KEGG:ban:BA_5703 KEGG:bar:GBAA_5703 KEGG:bat:BAS5307
ProtClustDB:CLSK883265 BioCyc:BANT260799:GJAJ-5380-MONOMER
BioCyc:BANT261594:GJ7F-5556-MONOMER Uniprot:Q81JK1
Length = 481
Score = 360 (131.8 bits), Expect = 5.2e-33, P = 5.2e-33
Identities = 75/212 (35%), Positives = 124/212 (58%)
Query: 47 ENFDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGNDVIAQAQSGTGKTATFSISIL 106
++F + LS+E+ R + G+E P+ +Q I ++ D++ ++Q+G+GKTA+F I +
Sbjct: 4 KSFSNYALSKEVRRALTGLGYEHPTEVQGEVIPVALQKKDLVVKSQTGSGKTASFGIPLC 63
Query: 107 QQVDQNIKECQALILAPTRELAQQIQKVVIALGDFMSVSCHACIGGTIVRDDIRKLEAGA 166
+ V+ + QAL+L PTRELA Q+++ + +G F + A G + +L+
Sbjct: 64 EMVEWEENKPQALVLTPTRELAVQVKEDITNIGRFKRIKAAAIYGKSPFARQKLELKQKT 123
Query: 167 QVVVGTPGRVFDMISRGALSTKQIRMFVLDEADEMLSRGFKDQIYDVFKHLNNDVQVILL 226
+VVGTPGRV D I +G LS ++++ V+DEADEML+ GF DQ+ + L +L
Sbjct: 124 HIVVGTPGRVLDHIEKGTLSLERLKYLVIDEADEMLNMGFIDQVEAIIDELPTKRMTMLF 183
Query: 227 SATMPADVLDVSMKFMRDPIKILVKKEELTLE 258
SAT+P DV +S +M P I +K +T +
Sbjct: 184 SATLPEDVERLSRTYMNAPTHIEIKAAGITTD 215
>UNIPROTKB|Q9UHI6 [details] [associations]
symbol:DDX20 "Probable ATP-dependent RNA helicase DDX20"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005681 "spliceosomal
complex" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0006917 "induction of apoptosis" evidence=IEA] [GO:0017053
"transcriptional repressor complex" evidence=IEA] [GO:0015030
"Cajal body" evidence=IEA] [GO:0043065 "positive regulation of
apoptotic process" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0000244 "assembly of spliceosomal tri-snRNP" evidence=TAS]
[GO:0005856 "cytoskeleton" evidence=TAS] [GO:0000387 "spliceosomal
snRNP assembly" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016070 "RNA metabolic process"
evidence=TAS] [GO:0034660 "ncRNA metabolic process" evidence=TAS]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] Reactome:REACT_71 Reactome:REACT_21257
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005829 GO:GO:0005524 GO:GO:0017053
GO:GO:0005654 GO:GO:0006917 GO:GO:0005856 GO:GO:0003677
GO:GO:0005681 GO:GO:0000244 GO:GO:0000122 GO:GO:0043065
GO:GO:0015030 GO:GO:0034660 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 EMBL:AF171063 EMBL:AF106019 EMBL:AK001506
EMBL:AL049557 EMBL:BC011556 EMBL:AL133598 IPI:IPI00005904
PIR:T43476 RefSeq:NP_009135.4 UniGene:Hs.591405 PDB:2OXC PDB:3B7G
PDBsum:2OXC PDBsum:3B7G ProteinModelPortal:Q9UHI6 SMR:Q9UHI6
DIP:DIP-32606N IntAct:Q9UHI6 MINT:MINT-96973 STRING:Q9UHI6
PhosphoSite:Q9UHI6 DMDM:12643886 PaxDb:Q9UHI6 PeptideAtlas:Q9UHI6
PRIDE:Q9UHI6 DNASU:11218 Ensembl:ENST00000369702 GeneID:11218
KEGG:hsa:11218 UCSC:uc001ebs.3 CTD:11218 GeneCards:GC01P112298
HGNC:HGNC:2743 HPA:CAB015427 HPA:HPA005516 HPA:HPA023541 MIM:606168
neXtProt:NX_Q9UHI6 PharmGKB:PA27209 HOGENOM:HOG000112184
HOVERGEN:HBG051330 InParanoid:Q9UHI6 KO:K13131 OMA:VEDYEHY
OrthoDB:EOG4SF95N PhylomeDB:Q9UHI6 EvolutionaryTrace:Q9UHI6
GenomeRNAi:11218 NextBio:42699 ArrayExpress:Q9UHI6 Bgee:Q9UHI6
CleanEx:HS_DDX20 Genevestigator:Q9UHI6 GermOnline:ENSG00000064703
Uniprot:Q9UHI6
Length = 824
Score = 369 (135.0 bits), Expect = 5.6e-33, P = 5.6e-33
Identities = 88/214 (41%), Positives = 132/214 (61%)
Query: 48 NFDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVR-GNDVIAQAQSGTGKTATFS-ISI 105
+F+ + LS +L G+ A GFE+PS +Q +AI P R G D+I QA+SGTGKT FS I++
Sbjct: 63 DFESLLLSRPVLEGLRAAGFERPSPVQLKAI-PLGRCGLDLIVQAKSGTGKTCVFSTIAL 121
Query: 106 LQQVDQNIKECQALILAPTRELAQQIQKVVIALGDFMS-VSCHACIGGTIVRDDIRKLEA 164
V +N+ Q LILAPTRE+A QI V+ A+G M + CH IGGT + D +L+
Sbjct: 122 DSLVLENLST-QILILAPTREIAVQIHSVITAIGIKMEGLECHVFIGGTPLSQDKTRLKK 180
Query: 165 GAQVVVGTPGRVFDMISRGALSTKQIRMFVLDEADEMLSRG-FKDQIYDVFKHLNNDVQV 223
+ VG+PGR+ +I L+ IR+F+LDEAD++L G F++QI ++ L Q+
Sbjct: 181 -CHIAVGSPGRIKQLIELDYLNPGSIRLFILDEADKLLEEGSFQEQINWIYSSLPASKQM 239
Query: 224 ILLSATMPADVLDVSMKFMRDPIKILVKKEELTL 257
+ +SAT P + + K+MRDP + + + +L
Sbjct: 240 LAVSATYPEFLANALTKYMRDPTFVRLNSSDPSL 273
>UNIPROTKB|F1SCH3 [details] [associations]
symbol:DDX39A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006406 "mRNA export from nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 GO:GO:0006406
GO:GO:0000398 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095549 OMA:WANCVIS EMBL:FP103015
Ensembl:ENSSSCT00000015052 Uniprot:F1SCH3
Length = 475
Score = 359 (131.4 bits), Expect = 6.7e-33, P = 6.7e-33
Identities = 90/262 (34%), Positives = 142/262 (54%)
Query: 1 MAEQRGDNWEDPKNGPAENEAEQPAYNGPPGMAVDGLIETNWDHV-AENFDDMELSEELL 59
MAEQ +N + + + E + P N P D ++ ++ + + F D L ELL
Sbjct: 49 MAEQDVEN--ELLDYEEDEEPQAPPENAPAPPKKD--VKGSYVSIHSSGFRDFLLKPELL 104
Query: 60 RGIYAYGFEKPSAIQQRAIIPCVRGNDVIAQAQSGTGKTATFSISILQQVDQNIKECQAL 119
R I GFE PS +Q I + G DV+ QA+SG GKTA F ++ LQQ++ + L
Sbjct: 105 RAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQIEPVNGQVTVL 164
Query: 120 ILAPTRELAQQIQKVVIALGDFM-SVSCHACIGGTIVRDDIRKLEAGA-QVVVGTPGRVF 177
++ TRELA QI K +M SV GG ++ D L+ VVVGTPGR+
Sbjct: 165 VMCHTRELAFQISKEYERFSKYMPSVKVSVFFGGLSIKKDEEVLKKNCPHVVVGTPGRIL 224
Query: 178 DMISRGALSTKQIRMFVLDEADEMLSR-GFKDQIYDVFKHLNNDVQVILLSATMPADVLD 236
++ +L+ K ++ FVLDE D+ML + + + ++F+ ++ Q ++ SAT+ ++
Sbjct: 225 ALVRNRSLNLKNVKHFVLDECDKMLEQLDMRRDVQEIFRLTPHEKQCMMFSATLSKEIRP 284
Query: 237 VSMKFMRDPIKILVKKE-ELTL 257
V KFM+DP+++ V E +LTL
Sbjct: 285 VCRKFMQDPMEVFVDDETKLTL 306
>FB|FBgn0014189 [details] [associations]
symbol:Hel25E "Helicase at 25E" species:7227 "Drosophila
melanogaster" [GO:0005634 "nucleus" evidence=IC;NAS;IDA]
[GO:0006338 "chromatin remodeling" evidence=IMP] [GO:0005700
"polytene chromosome" evidence=IDA] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS;NAS] [GO:0003724 "RNA helicase
activity" evidence=ISS] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0006406 "mRNA export from nucleus" evidence=IMP]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000381 "regulation of alternative mRNA
splicing, via spliceosome" evidence=IMP] [GO:0007052 "mitotic
spindle organization" evidence=IMP] [GO:0005875 "microtubule
associated complex" evidence=IDA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005875 GO:GO:0007052
EMBL:AE014134 GO:GO:0016607 GO:GO:0005681 GO:GO:0003723
GO:GO:0006406 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 GO:GO:0000381 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00660000095549
KO:K12812 EMBL:X79802 EMBL:L06018 EMBL:AY118921 PIR:S51601
RefSeq:NP_723089.1 RefSeq:NP_723090.1 RefSeq:NP_723091.1
UniGene:Dm.3332 ProteinModelPortal:Q27268 SMR:Q27268 DIP:DIP-20199N
IntAct:Q27268 MINT:MINT-304772 STRING:Q27268 PaxDb:Q27268
PRIDE:Q27268 EnsemblMetazoa:FBtr0079123 EnsemblMetazoa:FBtr0079124
EnsemblMetazoa:FBtr0079125 GeneID:33781 KEGG:dme:Dmel_CG7269
CTD:33781 FlyBase:FBgn0014189 InParanoid:Q27268 OMA:ENRFLEE
OrthoDB:EOG47WM45 PhylomeDB:Q27268 GenomeRNAi:33781 NextBio:785218
Bgee:Q27268 GermOnline:CG7269 Uniprot:Q27268
Length = 424
Score = 358 (131.1 bits), Expect = 8.5e-33, P = 8.5e-33
Identities = 82/217 (37%), Positives = 124/217 (57%)
Query: 46 AENFDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGNDVIAQAQSGTGKTATFSISI 105
+ F D L E+LR I GFE PS +Q I V G D++ QA+SG GKTA F ++
Sbjct: 40 SSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLAT 99
Query: 106 LQQVDQNIKE-CQALILAPTRELAQQIQKVVIALGDFM-SVSCHACIGGTIVRDDIRKLE 163
LQQ++ + C L++ TRELA QI K +M +V GG ++ D L+
Sbjct: 100 LQQLEPSDNNTCHVLVMCHTRELAFQISKEYERFSKYMPTVKVAVFFGGMAIQKDEETLK 159
Query: 164 AGA-QVVVGTPGRVFDMISRGALSTKQIRMFVLDEADEMLSR-GFKDQIYDVFKHLNNDV 221
+G +VVGTPGR+ +I L+ K ++ FVLDE D+ML + + + ++F+ +
Sbjct: 160 SGTPHIVVGTPGRILALIRNKKLNLKLLKHFVLDECDKMLEQLDMRRDVQEIFRSTPHGK 219
Query: 222 QVILLSATMPADVLDVSMKFMRDPIKILVKKE-ELTL 257
QV++ SAT+ D+ V KFM+DP+++ V E +LTL
Sbjct: 220 QVMMFSATLSKDIRPVCKKFMQDPMEVYVDDEAKLTL 256
>UNIPROTKB|Q5E970 [details] [associations]
symbol:DDX39 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 39
isoform 1" species:9913 "Bos taurus" [GO:0006406 "mRNA export from
nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 GO:GO:0006406
GO:GO:0000398 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 CTD:10212 HOVERGEN:HBG107334
KO:K13182 OrthoDB:EOG4XSKPX GeneTree:ENSGT00660000095549
OMA:WANCVIS EMBL:DAAA02019335 EMBL:BT021050 IPI:IPI00700228
RefSeq:NP_001029924.1 UniGene:Bt.29896 SMR:Q5E970 STRING:Q5E970
Ensembl:ENSBTAT00000029088 GeneID:614215 KEGG:bta:614215
InParanoid:Q5E970 NextBio:20899000 Uniprot:Q5E970
Length = 427
Score = 358 (131.1 bits), Expect = 8.5e-33, P = 8.5e-33
Identities = 88/262 (33%), Positives = 143/262 (54%)
Query: 1 MAEQRGDNWEDPKNGPAENEAEQPAYNGPPGMAVDGLIETNWDHV-AENFDDMELSEELL 59
MAEQ +N + + + E + P + PP D ++ ++ + + F D L ELL
Sbjct: 1 MAEQDVEN--ELLDYEEDEEPQAPPESAPPPPKKD--VKGSYVSIHSSGFRDFLLKPELL 56
Query: 60 RGIYAYGFEKPSAIQQRAIIPCVRGNDVIAQAQSGTGKTATFSISILQQVDQNIKECQAL 119
R I GFE PS +Q I + G D++ QA+SG GKTA F ++ LQQ++ + L
Sbjct: 57 RAIVDCGFEHPSEVQHECIPQAILGMDILCQAKSGMGKTAVFVLATLQQIEPVNGQVTVL 116
Query: 120 ILAPTRELAQQIQKVVIALGDFM-SVSCHACIGGTIVRDDIRKLEAGA-QVVVGTPGRVF 177
++ TRELA QI K +M SV GG ++ D L+ VVVGTPGR+
Sbjct: 117 VMCHTRELAFQISKEYERFSKYMPSVKVSVFFGGLSIKKDEEVLKRNCPHVVVGTPGRIL 176
Query: 178 DMISRGALSTKQIRMFVLDEADEMLSR-GFKDQIYDVFKHLNNDVQVILLSATMPADVLD 236
++ +L+ + ++ FVLDE D+ML + + + ++F+ ++ Q ++ SAT+ ++
Sbjct: 177 ALVRNRSLNLRNVKHFVLDECDKMLEQLDMRRDVQEIFRLTPHEKQCMMFSATLSKEIRP 236
Query: 237 VSMKFMRDPIKILVKKE-ELTL 257
V KFM+DP+++ V E +LTL
Sbjct: 237 VCRKFMQDPMEVFVDDETKLTL 258
>MGI|MGI:1915528 [details] [associations]
symbol:Ddx39 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 39"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISO] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0006406 "mRNA export from nucleus" evidence=ISO]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
MGI:MGI:1915528 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0003676 GO:GO:0006406 GO:GO:0000398 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107334 KO:K13182
OrthoDB:EOG4XSKPX EMBL:AK088894 EMBL:AK145927 EMBL:AK146294
EMBL:AK150997 EMBL:AK162752 EMBL:AK168079 EMBL:BC020134
IPI:IPI00123878 IPI:IPI00553461 RefSeq:NP_932099.2 UniGene:Mm.28222
ProteinModelPortal:Q8VDW0 SMR:Q8VDW0 STRING:Q8VDW0
PhosphoSite:Q8VDW0 PaxDb:Q8VDW0 PRIDE:Q8VDW0
Ensembl:ENSMUST00000019576 Ensembl:ENSMUST00000109810
Ensembl:ENSMUST00000172396 GeneID:68278 KEGG:mmu:68278
UCSC:uc008chc.2 CTD:68278 GeneTree:ENSGT00660000095549
InParanoid:Q8VDW0 OMA:WANCVIS NextBio:326910 Bgee:Q8VDW0
CleanEx:MM_DDX39 Genevestigator:Q8VDW0
GermOnline:ENSMUSG00000005481 Uniprot:Q8VDW0
Length = 427
Score = 358 (131.1 bits), Expect = 8.5e-33, P = 8.5e-33
Identities = 92/261 (35%), Positives = 140/261 (53%)
Query: 1 MAEQRGDNWEDPKNGPAENEAEQPAYNGPPGMAVDGLIETNWDHVAENFDDMELSEELLR 60
MAEQ +N + E +A Q + PP V G + H + F D L ELLR
Sbjct: 1 MAEQDVENELLDYDEDEEPQAPQESTPAPPKKDVKGSYVSI--H-SSGFRDFLLKPELLR 57
Query: 61 GIYAYGFEKPSAIQQRAIIPCVRGNDVIAQAQSGTGKTATFSISILQQVDQNIKECQALI 120
I GFE PS +Q I + G DV+ QA+SG GKTA F ++ LQQ++ + L+
Sbjct: 58 AIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQIEPVNGQVSVLV 117
Query: 121 LAPTRELAQQIQKVVIALGDFM-SVSCHACIGGTIVRDDIRKLEAGA-QVVVGTPGRVFD 178
+ TRELA QI K +M SV GG ++ D L+ VVVGTPGR+
Sbjct: 118 MCHTRELAFQISKEYERFSKYMPSVKVSVFFGGLSIKKDEDVLKKNCPHVVVGTPGRILA 177
Query: 179 MISRGALSTKQIRMFVLDEADEMLSR-GFKDQIYDVFKHLNNDVQVILLSATMPADVLDV 237
++ +L+ + ++ FVLDE D+ML + + + ++F+ ++ Q ++ SAT+ ++ V
Sbjct: 178 LVRSRSLNLRNVKHFVLDECDKMLEQLDMRRDVQEIFRLTPHEKQCMMFSATLSKEIRPV 237
Query: 238 SMKFMRDPIKILVKKE-ELTL 257
KFM+DP+++ V E +LTL
Sbjct: 238 CRKFMQDPMEVFVDDETKLTL 258
>UNIPROTKB|F1MRW7 [details] [associations]
symbol:DDX20 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0017053 "transcriptional repressor complex"
evidence=IEA] [GO:0006917 "induction of apoptosis" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0017053 GO:GO:0006917 GO:GO:0003676
GO:GO:0000122 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 OMA:VEDYEHY
GeneTree:ENSGT00530000062880 EMBL:DAAA02007520 IPI:IPI00867090
UniGene:Bt.13425 Ensembl:ENSBTAT00000024914 Uniprot:F1MRW7
Length = 825
Score = 366 (133.9 bits), Expect = 1.2e-32, P = 1.2e-32
Identities = 87/214 (40%), Positives = 132/214 (61%)
Query: 48 NFDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVR-GNDVIAQAQSGTGKTATFS-ISI 105
+F+ + LS +L G+ A GFE+PS +Q +AI P R G D+I QA+SGTGKT FS I++
Sbjct: 63 DFESLLLSRPVLEGLRAVGFERPSPVQLKAI-PLGRCGLDLIVQAKSGTGKTCVFSTIAL 121
Query: 106 LQQVDQNIKECQALILAPTRELAQQIQKVVIALGDFMS-VSCHACIGGTIVRDDIRKLEA 164
V +N+ Q LILAPTRE+A QI V+ A+G M + CH IGGT + D +L+
Sbjct: 122 DSLVLENLST-QILILAPTREIAVQIHSVITAIGIKMEGLECHVFIGGTPLSQDKTRLKK 180
Query: 165 GAQVVVGTPGRVFDMISRGALSTKQIRMFVLDEADEMLSRG-FKDQIYDVFKHLNNDVQV 223
+ VG+PGR+ +I L+ IR+F+LDEAD++L G F++QI ++ L Q+
Sbjct: 181 -CHIAVGSPGRIKQLIELDYLNPGSIRLFILDEADKLLEEGSFQEQINWIYSSLPASKQM 239
Query: 224 ILLSATMPADVLDVSMKFMRDPIKILVKKEELTL 257
+ +SAT P + + K+MR+P + + + +L
Sbjct: 240 LAVSATYPEFLANALTKYMREPTFVRLNSSDPSL 273
>UNIPROTKB|E2QY95 [details] [associations]
symbol:DDX39A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006406 "mRNA export from nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 GO:GO:0006406
GO:GO:0000398 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 CTD:10212
KO:K13182 GeneTree:ENSGT00660000095549 OMA:WANCVIS
EMBL:AAEX03012368 RefSeq:XP_533895.2 Ensembl:ENSCAFT00000025943
GeneID:476689 KEGG:cfa:476689 NextBio:20852303 Uniprot:E2QY95
Length = 427
Score = 356 (130.4 bits), Expect = 1.4e-32, P = 1.4e-32
Identities = 92/261 (35%), Positives = 138/261 (52%)
Query: 1 MAEQRGDNWEDPKNGPAENEAEQPAYNGPPGMAVDGLIETNWDHVAENFDDMELSEELLR 60
MAEQ +N E +A + PP V G + H + F D L ELLR
Sbjct: 1 MAEQDVENELLDYEEDEEPQAPPESTPAPPKKDVKGSYVSI--H-SSGFRDFLLKPELLR 57
Query: 61 GIYAYGFEKPSAIQQRAIIPCVRGNDVIAQAQSGTGKTATFSISILQQVDQNIKECQALI 120
I GFE PS +Q I + G DV+ QA+SG GKTA F ++ LQQ++ + L+
Sbjct: 58 AIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQIEPVNGQVTVLV 117
Query: 121 LAPTRELAQQIQKVVIALGDFM-SVSCHACIGGTIVRDDIRKLEAGA-QVVVGTPGRVFD 178
+ TRELA QI K +M SV GG ++ D L+ VVVGTPGR+
Sbjct: 118 MCHTRELAFQISKEYERFSKYMPSVKVSVFFGGLSIKKDEEVLKKNCPHVVVGTPGRILA 177
Query: 179 MISRGALSTKQIRMFVLDEADEMLSR-GFKDQIYDVFKHLNNDVQVILLSATMPADVLDV 237
++ +L+ K ++ FVLDE D+ML + + + ++F+ ++ Q ++ SAT+ ++ V
Sbjct: 178 LVRNRSLNLKNVKHFVLDECDKMLEQLDMRRDVQEIFRLTPHEKQCMMFSATLSKEIRPV 237
Query: 238 SMKFMRDPIKILVKKE-ELTL 257
KFM+DP+++ V E +LTL
Sbjct: 238 CRKFMQDPMEVFVDDETKLTL 258
>ZFIN|ZDB-GENE-040426-2902 [details] [associations]
symbol:ddx39ab "DEAD (Asp-Glu-Ala-Asp) box
polypeptide 39Ab" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-040426-2902 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
HOVERGEN:HBG107334 KO:K13182 OrthoDB:EOG4XSKPX
GeneTree:ENSGT00660000095549 OMA:WANCVIS CTD:7919 EMBL:FP101915
EMBL:BC044169 EMBL:BC067555 EMBL:BC128804 EMBL:BX248081
IPI:IPI00631848 RefSeq:NP_998142.1 UniGene:Dr.75872 SMR:Q803W0
STRING:Q803W0 Ensembl:ENSDART00000019957 GeneID:406249
KEGG:dre:406249 InParanoid:Q803W0 NextBio:20817884 Uniprot:Q803W0
Length = 427
Score = 356 (130.4 bits), Expect = 1.4e-32, P = 1.4e-32
Identities = 86/254 (33%), Positives = 134/254 (52%)
Query: 11 DPKNGPAENEAEQPAYNGPPGMAVDGLIETNWDHVA---ENFDDMELSEELLRGIYAYGF 67
D +N + E ++ P A G E +V+ F D L ELLR I GF
Sbjct: 5 DVENELLDYEEDEEPQGAPESAAPVGKKEVKGSYVSIHSSGFRDFLLKPELLRAIVDCGF 64
Query: 68 EKPSAIQQRAIIPCVRGNDVIAQAQSGTGKTATFSISILQQVDQNIKECQALILAPTREL 127
E PS +Q I + G D++ QA+SG GKTA F ++ LQQ++ + L++ TREL
Sbjct: 65 EHPSEVQHECIPQAILGMDILCQAKSGMGKTAVFVLATLQQIEPVDGQVSVLVMCHTREL 124
Query: 128 AQQIQKVVIALGDFM-SVSCHACIGGTIVRDDIRKLEAGA-QVVVGTPGRVFDMISRGAL 185
A QI K +M +V GG ++ D L+ +VVGTPGR+ ++ L
Sbjct: 125 AFQISKEYERFSKYMPTVKVAVFFGGMSIKKDEDVLKKSCPHIVVGTPGRILALVRNKTL 184
Query: 186 STKQIRMFVLDEADEMLSR-GFKDQIYDVFKHLNNDVQVILLSATMPADVLDVSMKFMRD 244
+ K ++ FVLDE D+ML + + + D+F+ ++ Q ++ SAT+ ++ V KFM+D
Sbjct: 185 NLKNVKHFVLDECDKMLEQLDMRRDVQDIFRLTPHEKQCMMFSATLSKEIRPVCRKFMQD 244
Query: 245 PIKILVKKE-ELTL 257
P+++ V E +LTL
Sbjct: 245 PMEVFVDDETKLTL 258
>UNIPROTKB|F1SBP3 [details] [associations]
symbol:DDX20 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0017053 "transcriptional repressor complex"
evidence=IEA] [GO:0006917 "induction of apoptosis" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0017053 GO:GO:0006917 GO:GO:0003676
GO:GO:0000122 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 CTD:11218
KO:K13131 OMA:VEDYEHY GeneTree:ENSGT00530000062880 EMBL:CU466482
RefSeq:XP_001928579.1 UniGene:Ssc.6364 Ensembl:ENSSSCT00000007430
GeneID:100152786 KEGG:ssc:100152786 Uniprot:F1SBP3
Length = 832
Score = 365 (133.5 bits), Expect = 1.6e-32, P = 1.6e-32
Identities = 87/214 (40%), Positives = 132/214 (61%)
Query: 48 NFDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVR-GNDVIAQAQSGTGKTATFS-ISI 105
+F+ + LS +L G+ A GFE+PS +Q +AI P R G D+I QA+SGTGKT FS I++
Sbjct: 70 DFESLLLSRPVLEGLRAAGFERPSPVQLKAI-PLGRCGLDLIVQAKSGTGKTCVFSTIAL 128
Query: 106 LQQVDQNIKECQALILAPTRELAQQIQKVVIALGDFMS-VSCHACIGGTIVRDDIRKLEA 164
V +N+ Q LILAPTRE+A QI V+ A+G M + CH IGGT + D +L+
Sbjct: 129 DSLVLENLST-QILILAPTREIAVQIHSVITAIGVKMEGLECHVFIGGTPLSQDKTRLKK 187
Query: 165 GAQVVVGTPGRVFDMISRGALSTKQIRMFVLDEADEMLSRG-FKDQIYDVFKHLNNDVQV 223
+ VG+PGR+ +I L+ IR+F+LDEAD++L G F++QI ++ L Q+
Sbjct: 188 -CHIAVGSPGRIKQLIELDYLNPGSIRLFILDEADKLLEEGSFQEQINWIYSSLPASKQM 246
Query: 224 ILLSATMPADVLDVSMKFMRDPIKILVKKEELTL 257
+ +SAT P + + K+MR+P + + + +L
Sbjct: 247 LAVSATYPEFLANALTKYMREPTFVRLNSSDPSL 280
>UNIPROTKB|Q2TBP1 [details] [associations]
symbol:DDX25 "ATP-dependent RNA helicase DDX25"
species:9913 "Bos taurus" [GO:0006417 "regulation of translation"
evidence=ISS] [GO:0006406 "mRNA export from nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS] [GO:0033391
"chromatoid body" evidence=ISS] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0007286 "spermatid
development" evidence=ISS] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0007275
GO:GO:0005524 GO:GO:0005634 GO:GO:0006417 GO:GO:0007286
GO:GO:0003723 GO:GO:0006406 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0033391 GO:GO:0004004 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195 HSSP:Q9UHL0
HOVERGEN:HBG107989 EMBL:BC109867 IPI:IPI00724449
RefSeq:NP_001033606.1 UniGene:Bt.14611 ProteinModelPortal:Q2TBP1
SMR:Q2TBP1 PRIDE:Q2TBP1 GeneID:508962 KEGG:bta:508962 CTD:29118
InParanoid:Q2TBP1 OrthoDB:EOG4NS3BD NextBio:20868762 Uniprot:Q2TBP1
Length = 483
Score = 355 (130.0 bits), Expect = 1.8e-32, P = 1.8e-32
Identities = 92/219 (42%), Positives = 135/219 (61%)
Query: 47 ENFDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGN---DVIAQAQSGTGKTATFSI 103
+ F+++ L EELL+GIYA GF +PS IQ+ A+ P + + ++IAQ+QSGTGKTA F +
Sbjct: 97 KTFEELRLKEELLKGIYAMGFNRPSKIQEMAL-PMMLAHPPQNLIAQSQSGTGKTAAFVL 155
Query: 104 SILQQVDQNIKECQALILAPTRELAQQIQKVVIALGDF-MSVSC-HACIGGTIVRD-DIR 160
++L +V+ Q L LAPT ELA Q +VV +G F + V +A G I R D+
Sbjct: 156 AMLSRVNALKLFPQCLCLAPTYELALQTGRVVERMGKFCVDVQVMYAIRGNRIPRGTDVT 215
Query: 161 KLEAGAQVVVGTPGRVFDM-ISRGALSTKQIRMFVLDEADEML-SRGFKDQIYDVFKHLN 218
K Q+V+GTPG V D R + +IR+FVLDEAD M+ ++GF+DQ + + L
Sbjct: 216 K-----QIVIGTPGTVLDWCFKRKLIDLTKIRVFVLDEADVMIDTQGFEDQSIRIQRALP 270
Query: 219 NDVQVILLSATMPADVLDVSMKFMRDPIKILVKKEELTL 257
++ Q++L SAT V + + + DP I ++KEELTL
Sbjct: 271 SECQMLLFSATFEDSVWQFAERIIPDPNVIKLRKEELTL 309
>MGI|MGI:1353582 [details] [associations]
symbol:Ddx25 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 25"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=ISO] [GO:0003724 "RNA helicase
activity" evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IDA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IDA] [GO:0005634
"nucleus" evidence=ISO;IDA] [GO:0005737 "cytoplasm"
evidence=ISO;IDA] [GO:0006200 "ATP catabolic process"
evidence=ISO;IDA] [GO:0006406 "mRNA export from nucleus"
evidence=IDA] [GO:0006417 "regulation of translation" evidence=IDA]
[GO:0006810 "transport" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0007283 "spermatogenesis"
evidence=IEA] [GO:0007286 "spermatid development" evidence=IDA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=ISO] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0033391 "chromatoid body" evidence=IDA]
[GO:0051028 "mRNA transport" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 MGI:MGI:1353582 GO:GO:0007275
GO:GO:0005524 GO:GO:0005634 GO:GO:0006417 GO:GO:0007286
GO:GO:0003723 GO:GO:0006406 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0033391 GO:GO:0004004 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00530000063236 HOVERGEN:HBG107989 CTD:29118
OrthoDB:EOG4NS3BD OMA:WHFAERI ChiTaRS:DDX25 EMBL:AF142630
EMBL:AY380091 EMBL:AY380080 EMBL:AY380081 EMBL:AY380082
EMBL:AY380083 EMBL:AY380084 EMBL:AY380085 EMBL:AY380086
EMBL:AY380087 EMBL:AY380088 EMBL:AY380089 EMBL:AY380090
EMBL:AK050693 EMBL:AK078340 EMBL:BC024852 EMBL:BC061130
IPI:IPI00135420 IPI:IPI00759935 RefSeq:NP_038960.2
UniGene:Mm.291723 ProteinModelPortal:Q9QY15 SMR:Q9QY15
STRING:Q9QY15 PhosphoSite:Q9QY15 PaxDb:Q9QY15 PRIDE:Q9QY15
Ensembl:ENSMUST00000034612 GeneID:30959 KEGG:mmu:30959
UCSC:uc012gqi.1 InParanoid:Q9QY15 NextBio:307448 Bgee:Q9QY15
CleanEx:MM_DDX25 Genevestigator:Q9QY15
GermOnline:ENSMUSG00000032101 Uniprot:Q9QY15
Length = 484
Score = 355 (130.0 bits), Expect = 1.8e-32, P = 1.8e-32
Identities = 89/217 (41%), Positives = 131/217 (60%)
Query: 47 ENFDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGN---DVIAQAQSGTGKTATFSI 103
+ F+++ L EELL+GIYA GF +PS IQ+ A+ P + + ++IAQ+QSGTGKTA F +
Sbjct: 98 KTFEELRLKEELLKGIYAMGFNRPSKIQEMAL-PMMLAHPPQNLIAQSQSGTGKTAAFVL 156
Query: 104 SILQQVDQNIKECQALILAPTRELAQQIQKVVIALGDF-MSVSCHACIGGTIVRDDIRKL 162
++L +V+ Q L LAPT ELA Q +VV +G F + V I G + R
Sbjct: 157 AMLSRVNALELFPQCLCLAPTYELALQTGRVVERMGKFCVDVEVMYAIRGNRIP---RGT 213
Query: 163 EAGAQVVVGTPGRVFDM-ISRGALSTKQIRMFVLDEADEML-SRGFKDQIYDVFKHLNND 220
E Q+++GTPG V D R + +IR+FVLDEAD M+ ++GF DQ + + L ++
Sbjct: 214 EVTKQIIIGTPGTVLDWCFKRKLIDLTKIRVFVLDEADVMIDTQGFSDQSIRIQRALPSE 273
Query: 221 VQVILLSATMPADVLDVSMKFMRDPIKILVKKEELTL 257
Q++L SAT V + + + DP I ++KEELTL
Sbjct: 274 CQMLLFSATFEDSVWQFAERIIPDPNVIKLRKEELTL 310
>UNIPROTKB|Q81QF0 [details] [associations]
symbol:BAS2301 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:1392 "Bacillus anthracis" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HSSP:Q58083 HOGENOM:HOG000268807 RefSeq:NP_844851.1
RefSeq:YP_019115.1 RefSeq:YP_028562.1 ProteinModelPortal:Q81QF0
DNASU:1085525 EnsemblBacteria:EBBACT00000011128
EnsemblBacteria:EBBACT00000014583 EnsemblBacteria:EBBACT00000019769
GeneID:1085525 GeneID:2816610 GeneID:2853183 KEGG:ban:BA_2475
KEGG:bar:GBAA_2475 KEGG:bat:BAS2301 OMA:DNKGRPG
ProtClustDB:CLSK916648 BioCyc:BANT260799:GJAJ-2367-MONOMER
BioCyc:BANT261594:GJ7F-2455-MONOMER Uniprot:Q81QF0
Length = 450
Score = 354 (129.7 bits), Expect = 2.3e-32, P = 2.3e-32
Identities = 79/213 (37%), Positives = 122/213 (57%)
Query: 47 ENFDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGNDVIAQAQSGTGKTATFSISIL 106
+NF ++ +SE + G + + IQ++AI + G D+I QA++GTGKT F + IL
Sbjct: 5 KNFLELGISETFNHTLRENGITEATPIQEKAIPVILSGKDIIGQAKTGTGKTLAFVLPIL 64
Query: 107 QQVDQNIKECQALILAPTRELAQQIQ-KVVIALGDFMSVSCHACIGGTIVRDDIRKLEAG 165
+++D + QALI+APTRELA QI ++ L ++ A GG V +RKL+
Sbjct: 65 EKIDPESSDVQALIVAPTRELALQITTEIKKMLVQREDINVLAIYGGQDVAQQLRKLKGN 124
Query: 166 AQVVVGTPGRVFDMISRGALSTKQIRMFVLDEADEMLSRGFKDQIYDVFKHLNNDVQVIL 225
+VV TPGR+ D I R + + VLDEAD+ML GF I D+ Q +L
Sbjct: 125 THIVVATPGRLLDHIRRETIDLSNLSTIVLDEADQMLYFGFLYDIEDILDETPGSKQTML 184
Query: 226 LSATMPADVLDVSMKFMRDPIKILVKKEELTLE 258
SAT+P D+ ++ ++M +P I V+ EE+T++
Sbjct: 185 FSATIPKDIKKLAKRYMDEPQMIQVQSEEVTVD 217
>TIGR_CMR|BA_2475 [details] [associations]
symbol:BA_2475 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:198094 "Bacillus anthracis str. Ames" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HSSP:Q58083 HOGENOM:HOG000268807 RefSeq:NP_844851.1
RefSeq:YP_019115.1 RefSeq:YP_028562.1 ProteinModelPortal:Q81QF0
DNASU:1085525 EnsemblBacteria:EBBACT00000011128
EnsemblBacteria:EBBACT00000014583 EnsemblBacteria:EBBACT00000019769
GeneID:1085525 GeneID:2816610 GeneID:2853183 KEGG:ban:BA_2475
KEGG:bar:GBAA_2475 KEGG:bat:BAS2301 OMA:DNKGRPG
ProtClustDB:CLSK916648 BioCyc:BANT260799:GJAJ-2367-MONOMER
BioCyc:BANT261594:GJ7F-2455-MONOMER Uniprot:Q81QF0
Length = 450
Score = 354 (129.7 bits), Expect = 2.3e-32, P = 2.3e-32
Identities = 79/213 (37%), Positives = 122/213 (57%)
Query: 47 ENFDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGNDVIAQAQSGTGKTATFSISIL 106
+NF ++ +SE + G + + IQ++AI + G D+I QA++GTGKT F + IL
Sbjct: 5 KNFLELGISETFNHTLRENGITEATPIQEKAIPVILSGKDIIGQAKTGTGKTLAFVLPIL 64
Query: 107 QQVDQNIKECQALILAPTRELAQQIQ-KVVIALGDFMSVSCHACIGGTIVRDDIRKLEAG 165
+++D + QALI+APTRELA QI ++ L ++ A GG V +RKL+
Sbjct: 65 EKIDPESSDVQALIVAPTRELALQITTEIKKMLVQREDINVLAIYGGQDVAQQLRKLKGN 124
Query: 166 AQVVVGTPGRVFDMISRGALSTKQIRMFVLDEADEMLSRGFKDQIYDVFKHLNNDVQVIL 225
+VV TPGR+ D I R + + VLDEAD+ML GF I D+ Q +L
Sbjct: 125 THIVVATPGRLLDHIRRETIDLSNLSTIVLDEADQMLYFGFLYDIEDILDETPGSKQTML 184
Query: 226 LSATMPADVLDVSMKFMRDPIKILVKKEELTLE 258
SAT+P D+ ++ ++M +P I V+ EE+T++
Sbjct: 185 FSATIPKDIKKLAKRYMDEPQMIQVQSEEVTVD 217
>TIGR_CMR|CPS_2658 [details] [associations]
symbol:CPS_2658 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:CP000083
GenomeReviews:CP000083_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268807 RefSeq:YP_269372.1
ProteinModelPortal:Q480Z7 GeneID:3520428 KEGG:cps:CPS_2658
PATRIC:21468367 OMA:ERNFDSS BioCyc:CPSY167879:GI48-2720-MONOMER
Uniprot:Q480Z7
Length = 399
Score = 354 (129.7 bits), Expect = 2.3e-32, P = 2.3e-32
Identities = 75/215 (34%), Positives = 120/215 (55%)
Query: 49 FDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGNDVIAQAQSGTGKTATFSISILQQ 108
F L E ++ + G+++P+ IQ+ I + GND++ AQ+GTGKTA FS+ I+ +
Sbjct: 4 FKAFSLLESIIDRVNLKGYKQPTPIQKECIPALINGNDLLGIAQTGTGKTAAFSLPIINK 63
Query: 109 -----VDQNIKECQALILAPTRELAQQIQKVVIALGDFMSVSCHACIGGTIVRDDIRKLE 163
+D K ++LIL PTRELA QI + + D + + GG + + +E
Sbjct: 64 FGRNKIDIKAKSTRSLILTPTRELASQIMQNIDDYSDGLGLKTKVVYGGVGRQAQVDSIE 123
Query: 164 AGAQVVVGTPGRVFDMISRGALSTKQIRMFVLDEADEMLSRGFKDQIYDVFKHLNNDVQV 223
G ++V TPGR+ D+I G ++ K + +FVLDEAD ML GF + + L Q
Sbjct: 124 LGLDILVATPGRLLDLIETGDINFKALEVFVLDEADTMLDMGFFKDVQSIISKLPKSRQT 183
Query: 224 ILLSATMPADVLDVSMKFMRDPIKILVKKEELTLE 258
+L SATMPA++ ++ + DP KI + E +T++
Sbjct: 184 LLFSATMPAEIEILAEAILTDPTKIQITAETVTID 218
>RGD|619920 [details] [associations]
symbol:Ddx39a "DEAD (Asp-Glu-Ala-Asp) box polypeptide 39A"
species:10116 "Rattus norvegicus" [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IEA;ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0006406 "mRNA export from nucleus"
evidence=IEA;ISO] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 EMBL:AF063447 RGD:619920
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0003676
GO:GO:0006406 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 CTD:10212 HOVERGEN:HBG107334 KO:K13182
OrthoDB:EOG4XSKPX GeneTree:ENSGT00660000095549 OMA:WANCVIS
EMBL:BC086328 IPI:IPI00325144 RefSeq:NP_446015.2 UniGene:Rn.161716
ProteinModelPortal:Q5U216 SMR:Q5U216 STRING:Q5U216 PRIDE:Q5U216
Ensembl:ENSRNOT00000045974 GeneID:89827 KEGG:rno:89827
InParanoid:Q5U216 NextBio:617744 Genevestigator:Q5U216
GermOnline:ENSRNOG00000004373 Uniprot:Q5U216
Length = 427
Score = 354 (129.7 bits), Expect = 2.3e-32, P = 2.3e-32
Identities = 91/261 (34%), Positives = 139/261 (53%)
Query: 1 MAEQRGDNWEDPKNGPAENEAEQPAYNGPPGMAVDGLIETNWDHVAENFDDMELSEELLR 60
MAEQ +N + E + Q + PP V G + H + F D L ELLR
Sbjct: 1 MAEQDVENELLDYDEDEEPQVPQESTPAPPKKDVKGSYVSI--H-SSGFRDFLLKPELLR 57
Query: 61 GIYAYGFEKPSAIQQRAIIPCVRGNDVIAQAQSGTGKTATFSISILQQVDQNIKECQALI 120
I GFE PS +Q I + G DV+ QA+SG GKTA F ++ LQQ++ + L+
Sbjct: 58 AIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQIEPINGQVSVLV 117
Query: 121 LAPTRELAQQIQKVVIALGDFM-SVSCHACIGGTIVRDDIRKLEAGA-QVVVGTPGRVFD 178
+ TRELA QI K +M SV GG ++ D L+ VVVGTPGR+
Sbjct: 118 MCHTRELAFQISKEYERFSKYMPSVKVSVFFGGLSIKKDEDVLKKNCPHVVVGTPGRILA 177
Query: 179 MISRGALSTKQIRMFVLDEADEMLSR-GFKDQIYDVFKHLNNDVQVILLSATMPADVLDV 237
++ +L+ + ++ FVLDE D+ML + + + ++F+ ++ Q ++ SAT+ ++ V
Sbjct: 178 LVRSRSLNLRNVKHFVLDECDKMLEQLDMRRDVQEIFRLTPHEKQCMMFSATLSKEIRPV 237
Query: 238 SMKFMRDPIKILVKKE-ELTL 257
KFM+DP+++ V E +LTL
Sbjct: 238 CRKFMQDPMEVFVDDETKLTL 258
>RGD|68381 [details] [associations]
symbol:Ddx25 "DEAD (Asp-Glu-Ala-Asp) box helicase 25"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IDA] [GO:0003724
"RNA helicase activity" evidence=IDA] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=IEA;ISO;ISS] [GO:0005524 "ATP binding"
evidence=IEA;ISO;ISS] [GO:0005634 "nucleus" evidence=IEA;ISO;IDA]
[GO:0005737 "cytoplasm" evidence=ISO;IDA] [GO:0006200 "ATP catabolic
process" evidence=ISO;IDA] [GO:0006406 "mRNA export from nucleus"
evidence=IEA;ISO;ISS] [GO:0006417 "regulation of translation"
evidence=IEA;ISO;ISS] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0007286 "spermatid development"
evidence=IEA;ISO;ISS] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0033391 "chromatoid body" evidence=IEA;ISO;ISS]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 RGD:68381
GO:GO:0007275 GO:GO:0005524 GO:GO:0005634 GO:GO:0006417
GO:GO:0007286 GO:GO:0003723 GO:GO:0006406 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0033391 GO:GO:0004004
eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 HOVERGEN:HBG107989 CTD:29118 OrthoDB:EOG4NS3BD
EMBL:AF142629 IPI:IPI00213497 IPI:IPI00760145 IPI:IPI00760150
RefSeq:NP_113818.2 UniGene:Rn.224821 ProteinModelPortal:Q9QY16
SMR:Q9QY16 STRING:Q9QY16 PRIDE:Q9QY16 GeneID:58856 KEGG:rno:58856
UCSC:RGD:68381 InParanoid:Q9QY16 NextBio:611449 ArrayExpress:Q9QY16
Genevestigator:Q9QY16 GermOnline:ENSRNOG00000012260 Uniprot:Q9QY16
Length = 483
Score = 354 (129.7 bits), Expect = 2.3e-32, P = 2.3e-32
Identities = 92/219 (42%), Positives = 134/219 (61%)
Query: 47 ENFDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGN---DVIAQAQSGTGKTATFSI 103
+ F+++ L EELL+GIYA GF +PS IQ+ A+ P + + ++IAQ+QSGTGKTA F +
Sbjct: 97 KTFEELRLKEELLKGIYAMGFNRPSKIQEMAL-PMMLAHPPQNLIAQSQSGTGKTAAFVL 155
Query: 104 SILQQVDQNIKECQALILAPTRELAQQIQKVVIALGDF-MSVSC-HACIGGTIVRD-DIR 160
++L +V+ Q L LAPT ELA Q +VV +G F + V +A G I R D+
Sbjct: 156 AMLNRVNALELFPQCLCLAPTYELALQTGRVVERMGKFCVDVEVMYAIRGNRIPRGTDVT 215
Query: 161 KLEAGAQVVVGTPGRVFDM-ISRGALSTKQIRMFVLDEADEML-SRGFKDQIYDVFKHLN 218
K Q+V+GTPG V D R + +IR+FVLDEAD M+ ++GF DQ + + L
Sbjct: 216 K-----QIVIGTPGTVLDWCFKRKLIDLTKIRVFVLDEADVMIDTQGFSDQSIRIQRALP 270
Query: 219 NDVQVILLSATMPADVLDVSMKFMRDPIKILVKKEELTL 257
++ Q++L SAT V + + + DP I ++KEELTL
Sbjct: 271 SECQMLLFSATFEDSVWQFAERIIPDPNVIKLRKEELTL 309
>UNIPROTKB|F1MAM8 [details] [associations]
symbol:Ddx20 "Protein Ddx20" species:10116 "Rattus
norvegicus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006917 "induction of
apoptosis" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 RGD:621744 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 CTD:11218
KO:K13131 GeneTree:ENSGT00530000062880 IPI:IPI00947925
RefSeq:NP_001178640.1 UniGene:Rn.137424 Ensembl:ENSRNOT00000068152
GeneID:84473 KEGG:rno:84473 NextBio:616964 ArrayExpress:F1MAM8
Uniprot:F1MAM8
Length = 824
Score = 363 (132.8 bits), Expect = 2.5e-32, P = 2.5e-32
Identities = 85/213 (39%), Positives = 127/213 (59%)
Query: 48 NFDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVR-GNDVIAQAQSGTGKTATFSISIL 106
+F+ + LS +L G+ A GFE+PS +Q +AI P R G D+I QA+SGTGKT FS L
Sbjct: 63 DFESLLLSRPVLEGLRAAGFERPSPVQLKAI-PLGRCGLDLIVQAKSGTGKTCVFSTIAL 121
Query: 107 QQVDQNIKECQALILAPTRELAQQIQKVVIALGDFMS-VSCHACIGGTIVRDDIRKLEAG 165
+ Q LILAPTRE+A QI V+ A+G M + CH IGGT + D +L+
Sbjct: 122 DSLILENYSTQILILAPTREIAVQIHSVITAIGIKMEGLECHVFIGGTPLSQDKTRLKK- 180
Query: 166 AQVVVGTPGRVFDMISRGALSTKQIRMFVLDEADEMLSRG-FKDQIYDVFKHLNNDVQVI 224
+ VG+PGR+ +I L+ IR+F+LDEAD++L G F++QI ++ L Q++
Sbjct: 181 CHIAVGSPGRIKQLIELDYLNPGSIRLFILDEADKLLEEGSFQEQINWIYSSLPASKQML 240
Query: 225 LLSATMPADVLDVSMKFMRDPIKILVKKEELTL 257
+SAT P + + ++MRDP + + + +L
Sbjct: 241 AVSATYPEILANALTRYMRDPTFVRLNPSDPSL 273
>MGI|MGI:1858415 [details] [associations]
symbol:Ddx20 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 20"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005681 "spliceosomal
complex" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0006917 "induction
of apoptosis" evidence=IPI] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017053
"transcriptional repressor complex" evidence=IDA] [GO:0019904
"protein domain specific binding" evidence=ISO] [GO:0043065
"positive regulation of apoptotic process" evidence=IMP]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISO] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 MGI:MGI:1858415 GO:GO:0005524
GO:GO:0005737 GO:GO:0017053 GO:GO:0006917 GO:GO:0008380
GO:GO:0003677 GO:GO:0006397 GO:GO:0005681 GO:GO:0000122
GO:GO:0015030 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 EMBL:CH466608 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 CTD:11218 HOGENOM:HOG000112184 HOVERGEN:HBG051330
KO:K13131 OMA:VEDYEHY OrthoDB:EOG4SF95N EMBL:AJ250027 EMBL:AF220454
EMBL:BC125471 EMBL:BC137721 IPI:IPI00122400 RefSeq:NP_059093.3
UniGene:Mm.272826 ProteinModelPortal:Q9JJY4 SMR:Q9JJY4
IntAct:Q9JJY4 STRING:Q9JJY4 PhosphoSite:Q9JJY4 PaxDb:Q9JJY4
PRIDE:Q9JJY4 Ensembl:ENSMUST00000090680 GeneID:53975 KEGG:mmu:53975
GeneTree:ENSGT00530000062880 InParanoid:Q059Z6 NextBio:310865
Bgee:Q9JJY4 CleanEx:MM_DDX20 Genevestigator:Q9JJY4
GermOnline:ENSMUSG00000027905 Uniprot:Q9JJY4
Length = 825
Score = 363 (132.8 bits), Expect = 2.5e-32, P = 2.5e-32
Identities = 85/213 (39%), Positives = 127/213 (59%)
Query: 48 NFDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVR-GNDVIAQAQSGTGKTATFSISIL 106
+F+ + LS +L G+ A GFE+PS +Q +AI P R G D+I QA+SGTGKT FS L
Sbjct: 64 DFESLLLSRPVLEGLRAAGFERPSPVQLKAI-PLGRCGLDLIVQAKSGTGKTCVFSTIAL 122
Query: 107 QQVDQNIKECQALILAPTRELAQQIQKVVIALGDFMS-VSCHACIGGTIVRDDIRKLEAG 165
+ Q LILAPTRE+A QI V+ A+G M + CH IGGT + D +L+
Sbjct: 123 DSLILENYSTQILILAPTREIAVQIHSVITAIGIKMEGLECHVFIGGTPLSQDKTRLKK- 181
Query: 166 AQVVVGTPGRVFDMISRGALSTKQIRMFVLDEADEMLSRG-FKDQIYDVFKHLNNDVQVI 224
+ VG+PGR+ +I L+ IR+F+LDEAD++L G F++QI ++ L Q++
Sbjct: 182 CHIAVGSPGRIKQLIELDYLNPGSIRLFILDEADKLLEEGSFQEQINWIYSSLPASKQML 241
Query: 225 LLSATMPADVLDVSMKFMRDPIKILVKKEELTL 257
+SAT P + + ++MRDP + + + +L
Sbjct: 242 AVSATYPEVLANALTRYMRDPTFVRLNPSDPSL 274
>UNIPROTKB|E9PSX0 [details] [associations]
symbol:Ddx20 "Protein Ddx20" species:10116 "Rattus
norvegicus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006917 "induction of
apoptosis" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 RGD:621744 GO:GO:0005524
GO:GO:0005737 GO:GO:0017053 GO:GO:0006917 GO:GO:0003676
GO:GO:0000122 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 IPI:IPI00554119
Ensembl:ENSRNOT00000020984 ArrayExpress:E9PSX0 Uniprot:E9PSX0
Length = 826
Score = 363 (132.8 bits), Expect = 2.5e-32, P = 2.5e-32
Identities = 85/213 (39%), Positives = 127/213 (59%)
Query: 48 NFDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVR-GNDVIAQAQSGTGKTATFSISIL 106
+F+ + LS +L G+ A GFE+PS +Q +AI P R G D+I QA+SGTGKT FS L
Sbjct: 63 DFESLLLSRPVLEGLRAAGFERPSPVQLKAI-PLGRCGLDLIVQAKSGTGKTCVFSTIAL 121
Query: 107 QQVDQNIKECQALILAPTRELAQQIQKVVIALGDFMS-VSCHACIGGTIVRDDIRKLEAG 165
+ Q LILAPTRE+A QI V+ A+G M + CH IGGT + D +L+
Sbjct: 122 DSLILENYSTQILILAPTREIAVQIHSVITAIGIKMEGLECHVFIGGTPLSQDKTRLKK- 180
Query: 166 AQVVVGTPGRVFDMISRGALSTKQIRMFVLDEADEMLSRG-FKDQIYDVFKHLNNDVQVI 224
+ VG+PGR+ +I L+ IR+F+LDEAD++L G F++QI ++ L Q++
Sbjct: 181 CHIAVGSPGRIKQLIELDYLNPGSIRLFILDEADKLLEEGSFQEQINWIYSSLPASKQML 240
Query: 225 LLSATMPADVLDVSMKFMRDPIKILVKKEELTL 257
+SAT P + + ++MRDP + + + +L
Sbjct: 241 AVSATYPEILANALTRYMRDPTFVRLNPSDPSL 273
>ZFIN|ZDB-GENE-030131-202 [details] [associations]
symbol:ddx20 "DEAD (Asp-Glu-Ala-Asp) box
polypeptide 20" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0005681 "spliceosomal complex"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 ZFIN:ZDB-GENE-030131-202
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00530000062880 EMBL:BX664742 IPI:IPI00890438
Ensembl:ENSDART00000087037 Ensembl:ENSDART00000134226
Uniprot:F1R1C1
Length = 789
Score = 362 (132.5 bits), Expect = 2.9e-32, P = 2.9e-32
Identities = 84/203 (41%), Positives = 122/203 (60%)
Query: 49 FDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVR-GNDVIAQAQSGTGKTATFSISILQ 107
F + LS+ +L G+ A GF++PS IQ +AI P R G D+I QA+SGTGKT F+ L
Sbjct: 56 FSSLLLSKPVLEGLSASGFQRPSPIQLKAI-PLGRCGLDLIVQAKSGTGKTCVFTTIALD 114
Query: 108 QVDQNIKECQALILAPTRELAQQIQKVVIALGDFMS-VSCHACIGGTIVRDDIRKLEAGA 166
+ Q L+LAPTRE+A QI VV+A+G M + CH IGG + D + L+
Sbjct: 115 SLILENATTQVLVLAPTREIAVQIHAVVMAIGSAMEGLECHVFIGGRPISQDKQHLKK-C 173
Query: 167 QVVVGTPGRVFDMISRGALSTKQIRMFVLDEADEML----SRGFKDQIYDVFKHLNNDVQ 222
+ +G+PGR+ +I GAL IR+FVLDEAD++L S F++QI ++ L + Q
Sbjct: 174 HIAIGSPGRIKQLIEMGALMVSSIRLFVLDEADKLLEDDSSSSFQEQINWIYSSLPANKQ 233
Query: 223 VILLSATMPADVLDVSMKFMRDP 245
++ LSAT P + ++MR+P
Sbjct: 234 MLALSATYPESLAQQLSRYMREP 256
>UNIPROTKB|F1MSI6 [details] [associations]
symbol:DDX25 "ATP-dependent RNA helicase DDX25"
species:9913 "Bos taurus" [GO:0033391 "chromatoid body"
evidence=IEA] [GO:0007286 "spermatid development" evidence=IEA]
[GO:0006417 "regulation of translation" evidence=IEA] [GO:0006406
"mRNA export from nucleus" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0006417
GO:GO:0007286 GO:GO:0003676 GO:GO:0006406 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0033391 GO:GO:0004004
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00530000063236
IPI:IPI00724449 OMA:WHFAERI EMBL:DAAA02063102
Ensembl:ENSBTAT00000005587 Uniprot:F1MSI6
Length = 483
Score = 353 (129.3 bits), Expect = 2.9e-32, P = 2.9e-32
Identities = 92/219 (42%), Positives = 134/219 (61%)
Query: 47 ENFDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGN---DVIAQAQSGTGKTATFSI 103
+ F+++ L EELL+GIYA GF +PS IQ+ A+ P + + ++IAQ+QSGTGKTA F +
Sbjct: 97 KTFEELRLKEELLKGIYAMGFNRPSKIQEMAL-PMMLAHPPQNLIAQSQSGTGKTAAFVL 155
Query: 104 SILQQVDQNIKECQALILAPTRELAQQIQKVVIALGDF-MSVSC-HACIGGTIVRD-DIR 160
++L +V+ Q L LAPT ELA Q +VV +G F + V +A G I R D+
Sbjct: 156 AMLSRVNALKLFPQCLCLAPTYELALQTGRVVERMGKFCVDVQVMYAIRGNRIPRGTDVT 215
Query: 161 KLEAGAQVVVGTPGRVFDM-ISRGALSTKQIRMFVLDEADEML-SRGFKDQIYDVFKHLN 218
K Q+V+GTPG V D R + +IR+FVLDEAD M+ ++GF DQ + + L
Sbjct: 216 K-----QIVIGTPGTVLDWCFKRKLIDLTKIRVFVLDEADVMIDTQGFADQSIRIQRALP 270
Query: 219 NDVQVILLSATMPADVLDVSMKFMRDPIKILVKKEELTL 257
++ Q++L SAT V + + + DP I ++KEELTL
Sbjct: 271 SECQMLLFSATFEDSVWQFAERIIPDPNVIKLRKEELTL 309
>UNIPROTKB|Q3T147 [details] [associations]
symbol:DDX39B "Spliceosome RNA helicase DDX39B"
species:9913 "Bos taurus" [GO:0006406 "mRNA export from nucleus"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISS] [GO:0016607 "nuclear speck" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0046784 "intronless viral mRNA export
from host nucleus" evidence=IEA] [GO:0043008 "ATP-dependent protein
binding" evidence=IEA] [GO:0030621 "U4 snRNA binding" evidence=IEA]
[GO:0017070 "U6 snRNA binding" evidence=IEA] [GO:0010501 "RNA
secondary structure unwinding" evidence=IEA] [GO:0005688 "U6 snRNP"
evidence=IEA] [GO:0005687 "U4 snRNP" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=IEA] [GO:0000346 "transcription export
complex" evidence=IEA] [GO:0000245 "spliceosomal complex assembly"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0016607 GO:GO:0005681 GO:GO:0006406 GO:GO:0000398
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0000245
GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GO:GO:0010501 GO:GO:0017070 HSSP:Q5STU4 HOVERGEN:HBG107334
OrthoDB:EOG4XSKPX GeneTree:ENSGT00660000095549 EMBL:BC102131
IPI:IPI00690141 RefSeq:NP_001028801.1 UniGene:Bt.4945
ProteinModelPortal:Q3T147 SMR:Q3T147 STRING:Q3T147 PRIDE:Q3T147
Ensembl:ENSBTAT00000029090 GeneID:540191 KEGG:bta:540191 CTD:7919
InParanoid:Q3T147 KO:K12812 OMA:NAENPAI NextBio:20878478
ArrayExpress:Q3T147 GO:GO:0000346 GO:GO:0005687 GO:GO:0005688
GO:GO:0030621 GO:GO:0046784 Uniprot:Q3T147
Length = 428
Score = 353 (129.3 bits), Expect = 2.9e-32, P = 2.9e-32
Identities = 93/262 (35%), Positives = 137/262 (52%)
Query: 1 MAEQRGDN-WEDPKNGPAENEAEQPAYNGPPGMAVDGLIETNWDHVAENFDDMELSEELL 59
MAE DN D ++ E A P V G + H + F D L ELL
Sbjct: 1 MAENDVDNELLDYEDDEVETAAGGDGAEAPAKKDVKGSYVSI--H-SSGFRDFLLKPELL 57
Query: 60 RGIYAYGFEKPSAIQQRAIIPCVRGNDVIAQAQSGTGKTATFSISILQQVDQNIKECQAL 119
R I GFE PS +Q I + G DV+ QA+SG GKTA F ++ LQQ++ + L
Sbjct: 58 RAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQVSVL 117
Query: 120 ILAPTRELAQQIQKVVIALGDFM-SVSCHACIGGTIVRDDIRKLEAGA-QVVVGTPGRVF 177
++ TRELA QI K +M SV GG ++ D L+ +VVGTPGR+
Sbjct: 118 VMCHTRELAFQISKEYERFSKYMPSVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRIL 177
Query: 178 DMISRGALSTKQIRMFVLDEADEMLSR-GFKDQIYDVFKHLNNDVQVILLSATMPADVLD 236
+ +L+ K I+ F+LDE D+ML + + + ++F+ ++ QV++ SAT+ ++
Sbjct: 178 ALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIRP 237
Query: 237 VSMKFMRDPIKILVKKE-ELTL 257
V KFM+DP++I V E +LTL
Sbjct: 238 VCRKFMQDPMEIFVDDETKLTL 259
>UNIPROTKB|A4RBS3 [details] [associations]
symbol:SUB2 "ATP-dependent RNA helicase SUB2"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0008380 GO:GO:0006397 GO:GO:0005681
GO:GO:0003723 GO:GO:0051028 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:CM000230 EMBL:CM001237 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K12812
RefSeq:XP_003720935.1 ProteinModelPortal:A4RBS3 SMR:A4RBS3
STRING:A4RBS3 PRIDE:A4RBS3 EnsemblFungi:MGG_02806T0 GeneID:2682359
KEGG:mgr:MGG_02806 OrthoDB:EOG4H49C6 Uniprot:A4RBS3
Length = 436
Score = 353 (129.3 bits), Expect = 2.9e-32, P = 2.9e-32
Identities = 88/251 (35%), Positives = 135/251 (53%)
Query: 19 NEAEQPAY--NGPPG-MAVDGLIETNWDHV---AENFDDMELSEELLRGIYAYGFEKPSA 72
NE PA NG G +A G ++ +V + F D L ELLR I GFE PS
Sbjct: 18 NETAAPAADSNGKKGELAAGGNVDKKGSYVGIHSTGFRDFLLKPELLRAIGDCGFEHPSE 77
Query: 73 IQQRAIIPCVRGNDVIAQAQSGTGKTATFSISILQQVDQNIKECQALILAPTRELAQQIQ 132
+QQ I + G D+I QA+SG GKTA F ++ LQQV+ EC L++ TRELA QI+
Sbjct: 78 VQQTCIPQAMLGGDIICQAKSGLGKTAVFVLTTLQQVEPVAGECSVLVMCHTRELAFQIR 137
Query: 133 KVVIALGDFM-SVSCHACIGGTIVRDD---IRKLEAGAQVVVGTPGRVFDMISRGALSTK 188
+M + GGT ++ D ++ E ++VGTPGR+ ++ L
Sbjct: 138 NEYNRFSKYMPDIKTGVFFGGTPIQKDAELLKNKETHPHIIVGTPGRLNALVRDKFLRLS 197
Query: 189 QIRMFVLDEADEMLSR-GFKDQIYDVFKHLNNDVQVILLSATMPADVLDVSMKFMRDPIK 247
+R+FVLDE D+ML + + + ++F+ QV++ SAT+ ++ + KFM++P +
Sbjct: 198 SVRIFVLDECDKMLDQIDMRRDVQEIFRATPQQKQVMMFSATLSDEIKPICKKFMQNPTE 257
Query: 248 ILVKKE-ELTL 257
V ++ +LTL
Sbjct: 258 HYVDEDTKLTL 268
>UNIPROTKB|Q4K4K3 [details] [associations]
symbol:dbpA "ATP-independent RNA helicase DbpA"
species:220664 "Pseudomonas protegens Pf-5" [GO:0003724 "RNA
helicase activity" evidence=ISS] [GO:0042254 "ribosome biogenesis"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
GO:GO:0042254 EMBL:CP000076 GenomeReviews:CP000076_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268809 KO:K05591 ProtClustDB:PRK11776
InterPro:IPR005580 Pfam:PF03880 OMA:THEKSTI RefSeq:YP_262830.1
ProteinModelPortal:Q4K4K3 STRING:Q4K4K3 GeneID:3480144
KEGG:pfl:PFL_5772 PATRIC:19881049
BioCyc:PFLU220664:GIX8-5812-MONOMER Uniprot:Q4K4K3
Length = 461
Score = 353 (129.3 bits), Expect = 2.9e-32, P = 2.9e-32
Identities = 76/202 (37%), Positives = 116/202 (57%)
Query: 45 VAENFDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGNDVIAQAQSGTGKTATFSIS 104
+A F+ + LS +L + + G+ + + IQ +++ ++G D+IAQA++G+GKTA F I
Sbjct: 4 IATAFNTLPLSPAMLANLDSLGYAQMTPIQAQSLPVILKGMDLIAQAKTGSGKTAAFGIG 63
Query: 105 ILQQVDQNIKECQALILAPTRELAQQIQKVVIALGDFM-SVSCHACIGGTIVRDDIRKLE 163
+L ++ CQAL++ PTRELA Q+ K V L ++ GG I LE
Sbjct: 64 LLNPINPRYFGCQALVICPTRELADQVAKEVRRLARAEDNIKVLTLCGGVSFGPQIASLE 123
Query: 164 AGAQVVVGTPGRVFDMISRGALSTKQIRMFVLDEADEMLSRGFKDQIYDVFKHLNNDVQV 223
GA ++VGTPGR+ + +G+L + VLDEAD ML GF D I D+ + + Q
Sbjct: 124 HGAHIIVGTPGRIQQHLRKGSLVLDGLNTLVLDEADRMLDMGFYDAIEDIIEKTPSRRQT 183
Query: 224 ILLSATMPADVLDVSMKFMRDP 245
+L SAT P + ++ KFMRDP
Sbjct: 184 LLFSATYPVGIKQLASKFMRDP 205
>TIGR_CMR|CPS_1418 [details] [associations]
symbol:CPS_1418 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 OMA:FRNLCAI
HOGENOM:HOG000268807 RefSeq:YP_268161.1 ProteinModelPortal:Q485V4
GeneID:3523021 KEGG:cps:CPS_1418 PATRIC:21466051
BioCyc:CPSY167879:GI48-1499-MONOMER Uniprot:Q485V4
Length = 401
Score = 353 (129.3 bits), Expect = 2.9e-32, P = 2.9e-32
Identities = 79/212 (37%), Positives = 123/212 (58%)
Query: 48 NFDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGNDVIAQAQSGTGKTATFSISILQ 107
+F ++LS +L I G+ KP+AIQQ+AI + G D+IA AQ+GTGKTA+F + +L+
Sbjct: 2 SFSTLKLSTPILNAIADLGYTKPTAIQQKAIPVVLAGKDIIAAAQTGTGKTASFVLPLLE 61
Query: 108 QVDQNIKEC---------QALILAPTRELAQQIQKVVIALGDFMSVSCHACIGGTIVRDD 158
Q++ KE +ALIL PTRELA Q++ + ++ +S A GG ++
Sbjct: 62 QLNSQYKETGKKLRAKRIRALILVPTRELAVQVEASISQYAKYLDISSMAMYGGVDAQEQ 121
Query: 159 IRKLEAGAQVVVGTPGRVFDMISRGALSTKQIRMFVLDEADEMLSRGFKDQIYDVFKHLN 218
++L G ++V TPGR+ DM + L ++ M VLDEAD ML GF D I + + L
Sbjct: 122 KQRLIWGVDILVATPGRLLDMTHQRVLHFDELDMLVLDEADRMLDMGFIDDINKIIERLP 181
Query: 219 NDVQVILLSATMPADVLDVSMKFMRDPIKILV 250
Q +L SATM +V ++ + + P++I +
Sbjct: 182 EHRQNLLFSATMSEEVRGLAKRTIHKPVEISI 213
>UNIPROTKB|F1PIZ6 [details] [associations]
symbol:DDX25 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00530000063236 OMA:WHFAERI
EMBL:AAEX03003382 Ensembl:ENSCAFT00000016722 Uniprot:F1PIZ6
Length = 462
Score = 352 (129.0 bits), Expect = 3.7e-32, P = 3.7e-32
Identities = 88/217 (40%), Positives = 131/217 (60%)
Query: 47 ENFDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGN---DVIAQAQSGTGKTATFSI 103
+ F+++ L EELL+GIYA GF +PS IQ+ A+ P + + ++IAQ+QSGTGKTA F +
Sbjct: 76 KTFEELRLKEELLKGIYAMGFNRPSKIQEMAL-PMMLAHPPQNLIAQSQSGTGKTAAFVL 134
Query: 104 SILQQVDQNIKECQALILAPTRELAQQIQKVVIALGDF-MSVSCHACIGGTIVRDDIRKL 162
++L +V+ Q L LAPT ELA Q +VV +G F + V I G + R
Sbjct: 135 AMLSRVNTLELFPQCLCLAPTYELALQTGRVVERMGKFCVDVQVMYAIRGNHIP---RGT 191
Query: 163 EAGAQVVVGTPGRVFDM-ISRGALSTKQIRMFVLDEADEML-SRGFKDQIYDVFKHLNND 220
+ Q+++GTPG V D R + +IR+FVLDEAD M+ ++GF DQ + + L ++
Sbjct: 192 DVTKQIIIGTPGTVLDWCFKRKLIDLTKIRVFVLDEADVMIDTQGFSDQSIRIQRALPSE 251
Query: 221 VQVILLSATMPADVLDVSMKFMRDPIKILVKKEELTL 257
Q++L SAT V + + + DP I ++KEELTL
Sbjct: 252 CQMLLFSATFEDSVWQFAERIIPDPNVIKLRKEELTL 288
>MGI|MGI:99240 [details] [associations]
symbol:Ddx39b "DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000245 "spliceosomal complex assembly"
evidence=ISO] [GO:0000346 "transcription export complex"
evidence=ISO] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISO] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISO] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005681 "spliceosomal
complex" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0006406 "mRNA
export from nucleus" evidence=ISO] [GO:0006810 "transport"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008186 "RNA-dependent ATPase activity"
evidence=ISO] [GO:0008380 "RNA splicing" evidence=ISO] [GO:0010501
"RNA secondary structure unwinding" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0017070 "U6 snRNA binding"
evidence=ISO] [GO:0030621 "U4 snRNA binding" evidence=ISO]
[GO:0043008 "ATP-dependent protein binding" evidence=ISO]
[GO:0046784 "intronless viral mRNA export from host nucleus"
evidence=ISO] [GO:0051028 "mRNA transport" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 MGI:MGI:99240 GO:GO:0005524
GO:GO:0005737 GO:GO:0016607 GO:GO:0005681 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0000245 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0010501
GO:GO:0017070 HOVERGEN:HBG107334 OrthoDB:EOG4XSKPX
GeneTree:ENSGT00660000095549 CTD:7919 KO:K12812 OMA:NAENPAI
GO:GO:0000346 GO:GO:0005687 GO:GO:0005688 GO:GO:0030621
GO:GO:0046784 EMBL:AF118128 EMBL:AY255786 EMBL:AY255787
EMBL:AC007080 EMBL:AK088867 EMBL:AK051034 EMBL:BC011067
EMBL:BC024859 IPI:IPI00409462 RefSeq:NP_001239386.1
RefSeq:NP_062667.1 UniGene:Mm.439827 ProteinModelPortal:Q9Z1N5
SMR:Q9Z1N5 IntAct:Q9Z1N5 STRING:Q9Z1N5 PhosphoSite:Q9Z1N5
PaxDb:Q9Z1N5 PRIDE:Q9Z1N5 Ensembl:ENSMUST00000068056
Ensembl:ENSMUST00000172549 Ensembl:ENSMUST00000173731 GeneID:53817
KEGG:mmu:53817 InParanoid:Q9Z1N5 NextBio:310679 Bgee:Q9Z1N5
CleanEx:MM_BAT1A Genevestigator:Q9Z1N5 Uniprot:Q9Z1N5
Length = 428
Score = 351 (128.6 bits), Expect = 4.7e-32, P = 4.7e-32
Identities = 92/262 (35%), Positives = 137/262 (52%)
Query: 1 MAEQRGDN-WEDPKNGPAENEAEQPAYNGPPGMAVDGLIETNWDHVAENFDDMELSEELL 59
MAE DN D ++ E A P V G + H + F D L ELL
Sbjct: 1 MAENDVDNELLDYEDDEVETAAGADGTEAPAKKDVKGSYVSI--H-SSGFRDFLLKPELL 57
Query: 60 RGIYAYGFEKPSAIQQRAIIPCVRGNDVIAQAQSGTGKTATFSISILQQVDQNIKECQAL 119
R I GFE PS +Q I + G DV+ QA+SG GKTA F ++ LQQ++ + L
Sbjct: 58 RAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQVSVL 117
Query: 120 ILAPTRELAQQIQKVVIALGDFM-SVSCHACIGGTIVRDDIRKLEAGA-QVVVGTPGRVF 177
++ TRELA QI K +M +V GG ++ D L+ +VVGTPGR+
Sbjct: 118 VMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRIL 177
Query: 178 DMISRGALSTKQIRMFVLDEADEMLSR-GFKDQIYDVFKHLNNDVQVILLSATMPADVLD 236
+ +L+ K I+ F+LDE D+ML + + + ++F+ ++ QV++ SAT+ ++
Sbjct: 178 ALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIRP 237
Query: 237 VSMKFMRDPIKILVKKE-ELTL 257
V KFM+DP++I V E +LTL
Sbjct: 238 VCRKFMQDPMEIFVDDETKLTL 259
>RGD|70923 [details] [associations]
symbol:Ddx39b "DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B"
species:10116 "Rattus norvegicus" [GO:0000245 "spliceosomal complex
assembly" evidence=IEA;ISO] [GO:0000346 "transcription export
complex" evidence=IEA;ISO] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IEA;ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005681 "spliceosomal
complex" evidence=IEA;ISO] [GO:0005687 "U4 snRNP" evidence=IEA;ISO]
[GO:0005688 "U6 snRNP" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0006406 "mRNA export from nucleus"
evidence=ISO] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008186 "RNA-dependent ATPase activity"
evidence=ISO] [GO:0008380 "RNA splicing" evidence=ISO] [GO:0010501
"RNA secondary structure unwinding" evidence=IEA;ISO] [GO:0016607
"nuclear speck" evidence=IEA] [GO:0017070 "U6 snRNA binding"
evidence=IEA;ISO] [GO:0030621 "U4 snRNA binding" evidence=IEA;ISO]
[GO:0043008 "ATP-dependent protein binding" evidence=IEA;ISO]
[GO:0046784 "intronless viral mRNA export from host nucleus"
evidence=IEA;ISO] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 RGD:70923 GO:GO:0005524
GO:GO:0005737 GO:GO:0016607 GO:GO:0005681 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0000245 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0010501
GO:GO:0017070 HOVERGEN:HBG107334 OrthoDB:EOG4XSKPX
GeneTree:ENSGT00660000095549 CTD:7919 KO:K12812 OMA:NAENPAI
GO:GO:0000346 GO:GO:0005687 GO:GO:0005688 GO:GO:0030621
GO:GO:0046784 EMBL:M75168 EMBL:AF387339 EMBL:AJ314857 EMBL:BC080243
IPI:IPI00215291 PIR:A42811 RefSeq:NP_579834.2 UniGene:Rn.202950
ProteinModelPortal:Q63413 SMR:Q63413 STRING:Q63413
World-2DPAGE:0004:Q63413 PRIDE:Q63413 Ensembl:ENSRNOT00000001115
GeneID:114612 KEGG:rno:114612 UCSC:RGD:70923 InParanoid:Q63413
NextBio:618775 ArrayExpress:Q63413 Genevestigator:Q63413
GermOnline:ENSRNOG00000000841 Uniprot:Q63413
Length = 428
Score = 351 (128.6 bits), Expect = 4.7e-32, P = 4.7e-32
Identities = 92/262 (35%), Positives = 137/262 (52%)
Query: 1 MAEQRGDN-WEDPKNGPAENEAEQPAYNGPPGMAVDGLIETNWDHVAENFDDMELSEELL 59
MAE DN D ++ E A P V G + H + F D L ELL
Sbjct: 1 MAENDVDNELLDYEDDEVETAAGADGTEAPAKKDVKGSYVSI--H-SSGFRDFLLKPELL 57
Query: 60 RGIYAYGFEKPSAIQQRAIIPCVRGNDVIAQAQSGTGKTATFSISILQQVDQNIKECQAL 119
R I GFE PS +Q I + G DV+ QA+SG GKTA F ++ LQQ++ + L
Sbjct: 58 RAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQVSVL 117
Query: 120 ILAPTRELAQQIQKVVIALGDFM-SVSCHACIGGTIVRDDIRKLEAGA-QVVVGTPGRVF 177
++ TRELA QI K +M +V GG ++ D L+ +VVGTPGR+
Sbjct: 118 VMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRIL 177
Query: 178 DMISRGALSTKQIRMFVLDEADEMLSR-GFKDQIYDVFKHLNNDVQVILLSATMPADVLD 236
+ +L+ K I+ F+LDE D+ML + + + ++F+ ++ QV++ SAT+ ++
Sbjct: 178 ALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIRP 237
Query: 237 VSMKFMRDPIKILVKKE-ELTL 257
V KFM+DP++I V E +LTL
Sbjct: 238 VCRKFMQDPMEIFVDDETKLTL 259
>UNIPROTKB|F6WLT2 [details] [associations]
symbol:DDX39B "Spliceosome RNA helicase DDX39B"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR011545
Pfam:PF00270 GO:GO:0005524 GO:GO:0003676 EMBL:AL662847
EMBL:AL662801 EMBL:CR753892 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
EMBL:BX001040 EMBL:BX248516 EMBL:BX927320 EMBL:CR753820
EMBL:CR753864 HGNC:HGNC:13917 ChiTaRS:DDX39B EMBL:CR942185
IPI:IPI00643815 SMR:F6WLT2 Ensembl:ENST00000414088
Ensembl:ENST00000417558 Ensembl:ENST00000427214
Ensembl:ENST00000435182 Ensembl:ENST00000438449
Ensembl:ENST00000439927 Ensembl:ENST00000455916 Uniprot:F6WLT2
Length = 289
Score = 350 (128.3 bits), Expect = 6.0e-32, P = 6.0e-32
Identities = 92/262 (35%), Positives = 137/262 (52%)
Query: 1 MAEQRGDN-WEDPKNGPAENEAEQPAYNGPPGMAVDGLIETNWDHVAENFDDMELSEELL 59
MAE DN D ++ E A P V G + H + F D L ELL
Sbjct: 1 MAENDVDNELLDYEDDEVETAAGGDGAEAPAKKDVKGSYVSI--H-SSGFRDFLLKPELL 57
Query: 60 RGIYAYGFEKPSAIQQRAIIPCVRGNDVIAQAQSGTGKTATFSISILQQVDQNIKECQAL 119
R I GFE PS +Q I + G DV+ QA+SG GKTA F ++ LQQ++ + L
Sbjct: 58 RAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQVSVL 117
Query: 120 ILAPTRELAQQIQKVVIALGDFM-SVSCHACIGGTIVRDDIRKLEAGA-QVVVGTPGRVF 177
++ TRELA QI K +M +V GG ++ D L+ +VVGTPGR+
Sbjct: 118 VMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRIL 177
Query: 178 DMISRGALSTKQIRMFVLDEADEMLSR-GFKDQIYDVFKHLNNDVQVILLSATMPADVLD 236
+ +L+ K I+ F+LDE D+ML + + + ++F+ ++ QV++ SAT+ ++
Sbjct: 178 ALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIRP 237
Query: 237 VSMKFMRDPIKILVKKE-ELTL 257
V KFM+DP++I V E +LTL
Sbjct: 238 VCRKFMQDPMEIFVDDETKLTL 259
>UNIPROTKB|F8VZL8 [details] [associations]
symbol:DDX39B "Spliceosome RNA helicase DDX39B"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR011545
Pfam:PF00270 GO:GO:0005524 GO:GO:0003676 EMBL:AL662847
EMBL:CR753892 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 EMBL:BX001040
EMBL:BX248516 EMBL:BX927320 EMBL:CR753820 EMBL:CR753864
HGNC:HGNC:13917 ChiTaRS:DDX39B EMBL:CR942185 IPI:IPI00643815
SMR:F8VZL8 Ensembl:ENST00000546633 Ensembl:ENST00000546637
Ensembl:ENST00000548331 Ensembl:ENST00000549374
Ensembl:ENST00000550435 Ensembl:ENST00000551031 Uniprot:F8VZL8
Length = 323
Score = 350 (128.3 bits), Expect = 6.0e-32, P = 6.0e-32
Identities = 92/262 (35%), Positives = 137/262 (52%)
Query: 1 MAEQRGDN-WEDPKNGPAENEAEQPAYNGPPGMAVDGLIETNWDHVAENFDDMELSEELL 59
MAE DN D ++ E A P V G + H + F D L ELL
Sbjct: 1 MAENDVDNELLDYEDDEVETAAGGDGAEAPAKKDVKGSYVSI--H-SSGFRDFLLKPELL 57
Query: 60 RGIYAYGFEKPSAIQQRAIIPCVRGNDVIAQAQSGTGKTATFSISILQQVDQNIKECQAL 119
R I GFE PS +Q I + G DV+ QA+SG GKTA F ++ LQQ++ + L
Sbjct: 58 RAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQVSVL 117
Query: 120 ILAPTRELAQQIQKVVIALGDFM-SVSCHACIGGTIVRDDIRKLEAGA-QVVVGTPGRVF 177
++ TRELA QI K +M +V GG ++ D L+ +VVGTPGR+
Sbjct: 118 VMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRIL 177
Query: 178 DMISRGALSTKQIRMFVLDEADEMLSR-GFKDQIYDVFKHLNNDVQVILLSATMPADVLD 236
+ +L+ K I+ F+LDE D+ML + + + ++F+ ++ QV++ SAT+ ++
Sbjct: 178 ALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIRP 237
Query: 237 VSMKFMRDPIKILVKKE-ELTL 257
V KFM+DP++I V E +LTL
Sbjct: 238 VCRKFMQDPMEIFVDDETKLTL 259
>UNIPROTKB|Q13838 [details] [associations]
symbol:DDX39B "Spliceosome RNA helicase DDX39B"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0016607 "nuclear speck" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0006406 "mRNA export from nucleus"
evidence=IGI;IDA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IGI] [GO:0000346 "transcription export complex"
evidence=IDA] [GO:0046784 "intronless viral mRNA export from host
nucleus" evidence=IDA] [GO:0008186 "RNA-dependent ATPase activity"
evidence=IDA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0008380 "RNA splicing" evidence=IDA]
[GO:0000245 "spliceosomal complex assembly" evidence=IDA]
[GO:0005681 "spliceosomal complex" evidence=IDA] [GO:0043008
"ATP-dependent protein binding" evidence=IDA] [GO:0005687 "U4
snRNP" evidence=IDA] [GO:0005688 "U6 snRNP" evidence=IDA]
[GO:0030621 "U4 snRNA binding" evidence=IDA] [GO:0017070 "U6 snRNA
binding" evidence=IDA] [GO:0010501 "RNA secondary structure
unwinding" evidence=IDA] InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005737 EMBL:BA000025 EMBL:CH471081
GO:GO:0016607 GO:GO:0005681 TCDB:3.A.18.1.1 EMBL:AL662847
EMBL:AL662801 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
CleanEx:HS_BAT1 GO:GO:0000245 GO:GO:0004004 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0010501 GO:GO:0017070
HOVERGEN:HBG107334 OrthoDB:EOG4XSKPX CTD:7919 KO:K12812
GO:GO:0000346 GO:GO:0030621 GO:GO:0046784 EMBL:Z37166 EMBL:BT009909
EMBL:AK222912 EMBL:AB088115 EMBL:AB103621 EMBL:AB202112
EMBL:BX001040 EMBL:BX248516 EMBL:BX927320 EMBL:CR753820
EMBL:CR753864 EMBL:BC000361 EMBL:BC013006 EMBL:AF029061
EMBL:AF029062 IPI:IPI00641829 IPI:IPI00848161 PIR:I37201
RefSeq:NP_004631.1 RefSeq:NP_542165.1 UniGene:Hs.254042
UniGene:Hs.730849 PDB:1T5I PDB:1T6N PDB:1XTI PDB:1XTJ PDB:1XTK
PDBsum:1T5I PDBsum:1T6N PDBsum:1XTI PDBsum:1XTJ PDBsum:1XTK
ProteinModelPortal:Q13838 SMR:Q13838 IntAct:Q13838
MINT:MINT-1032422 STRING:Q13838 PhosphoSite:Q13838 DMDM:2500529
PaxDb:Q13838 PRIDE:Q13838 DNASU:7919 Ensembl:ENST00000383508
Ensembl:ENST00000396172 Ensembl:ENST00000400295
Ensembl:ENST00000400296 Ensembl:ENST00000412106
Ensembl:ENST00000412330 Ensembl:ENST00000413678
Ensembl:ENST00000414440 Ensembl:ENST00000415689
Ensembl:ENST00000416863 Ensembl:ENST00000430784
Ensembl:ENST00000431360 Ensembl:ENST00000441425
Ensembl:ENST00000445218 Ensembl:ENST00000448296
Ensembl:ENST00000453138 Ensembl:ENST00000456476
Ensembl:ENST00000456666 Ensembl:ENST00000458640 GeneID:7919
KEGG:hsa:7919 UCSC:uc003ntt.3 GeneCards:GC06M031500 HGNC:HGNC:13917
HPA:CAB034012 MIM:142560 neXtProt:NX_Q13838 PharmGKB:PA25262
InParanoid:Q13838 PhylomeDB:Q13838 ChiTaRS:DDX39B
EvolutionaryTrace:Q13838 GenomeRNAi:7919 NextBio:30405
ArrayExpress:Q13838 Bgee:Q13838 Genevestigator:Q13838
GermOnline:ENSG00000198563 GO:GO:0043008 Uniprot:Q13838
Length = 428
Score = 350 (128.3 bits), Expect = 6.0e-32, P = 6.0e-32
Identities = 92/262 (35%), Positives = 137/262 (52%)
Query: 1 MAEQRGDN-WEDPKNGPAENEAEQPAYNGPPGMAVDGLIETNWDHVAENFDDMELSEELL 59
MAE DN D ++ E A P V G + H + F D L ELL
Sbjct: 1 MAENDVDNELLDYEDDEVETAAGGDGAEAPAKKDVKGSYVSI--H-SSGFRDFLLKPELL 57
Query: 60 RGIYAYGFEKPSAIQQRAIIPCVRGNDVIAQAQSGTGKTATFSISILQQVDQNIKECQAL 119
R I GFE PS +Q I + G DV+ QA+SG GKTA F ++ LQQ++ + L
Sbjct: 58 RAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQVSVL 117
Query: 120 ILAPTRELAQQIQKVVIALGDFM-SVSCHACIGGTIVRDDIRKLEAGA-QVVVGTPGRVF 177
++ TRELA QI K +M +V GG ++ D L+ +VVGTPGR+
Sbjct: 118 VMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRIL 177
Query: 178 DMISRGALSTKQIRMFVLDEADEMLSR-GFKDQIYDVFKHLNNDVQVILLSATMPADVLD 236
+ +L+ K I+ F+LDE D+ML + + + ++F+ ++ QV++ SAT+ ++
Sbjct: 178 ALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIRP 237
Query: 237 VSMKFMRDPIKILVKKE-ELTL 257
V KFM+DP++I V E +LTL
Sbjct: 238 VCRKFMQDPMEIFVDDETKLTL 259
>UNIPROTKB|Q5STU3 [details] [associations]
symbol:DDX39B "Spliceosome RNA helicase DDX39B"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:AL662847 EMBL:AL662801 EMBL:CR753892 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HOVERGEN:HBG107334 EMBL:BX001040 EMBL:BX248516
EMBL:BX927320 EMBL:CR753820 EMBL:CR753864 UniGene:Hs.254042
UniGene:Hs.730849 HGNC:HGNC:13917 EMBL:CR942185 IPI:IPI00790636
SMR:Q5STU3 STRING:Q5STU3 Ensembl:ENST00000376177
Ensembl:ENST00000400293 Ensembl:ENST00000430703
Ensembl:ENST00000438578 Ensembl:ENST00000446341
Ensembl:ENST00000450987 Ensembl:ENST00000453488 Uniprot:Q5STU3
Length = 425
Score = 350 (128.3 bits), Expect = 6.0e-32, P = 6.0e-32
Identities = 92/262 (35%), Positives = 137/262 (52%)
Query: 1 MAEQRGDN-WEDPKNGPAENEAEQPAYNGPPGMAVDGLIETNWDHVAENFDDMELSEELL 59
MAE DN D ++ E A P V G + H + F D L ELL
Sbjct: 1 MAENDVDNELLDYEDDEVETAAGGDGAEAPAKKDVKGSYVSI--H-SSGFRDFLLKPELL 57
Query: 60 RGIYAYGFEKPSAIQQRAIIPCVRGNDVIAQAQSGTGKTATFSISILQQVDQNIKECQAL 119
R I GFE PS +Q I + G DV+ QA+SG GKTA F ++ LQQ++ + L
Sbjct: 58 RAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQVSVL 117
Query: 120 ILAPTRELAQQIQKVVIALGDFM-SVSCHACIGGTIVRDDIRKLEAGA-QVVVGTPGRVF 177
++ TRELA QI K +M +V GG ++ D L+ +VVGTPGR+
Sbjct: 118 VMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRIL 177
Query: 178 DMISRGALSTKQIRMFVLDEADEMLSR-GFKDQIYDVFKHLNNDVQVILLSATMPADVLD 236
+ +L+ K I+ F+LDE D+ML + + + ++F+ ++ QV++ SAT+ ++
Sbjct: 178 ALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIRP 237
Query: 237 VSMKFMRDPIKILVKKE-ELTL 257
V KFM+DP++I V E +LTL
Sbjct: 238 VCRKFMQDPMEIFVDDETKLTL 259
>UNIPROTKB|F1RVF0 [details] [associations]
symbol:LOC100512980 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00530000063236 OMA:ESATTFE
Ensembl:ENSSSCT00000012145 Uniprot:F1RVF0
Length = 462
Score = 350 (128.3 bits), Expect = 6.0e-32, P = 6.0e-32
Identities = 92/219 (42%), Positives = 133/219 (60%)
Query: 47 ENFDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGN---DVIAQAQSGTGKTATFSI 103
+ F+++ L EELL+GIYA GF +PS IQ+ A+ P + + ++IAQ+QSGTGKTA F +
Sbjct: 76 KTFEELRLKEELLKGIYAMGFNRPSKIQEMAL-PMMLAHPPQNLIAQSQSGTGKTAAFVL 134
Query: 104 SILQQVDQNIKECQALILAPTRELAQQIQKVVIALGDF-MSVSC-HACIGGTIVRD-DIR 160
++L +V+ Q L LAPT ELA Q +VV +G F + V +A G I R DI
Sbjct: 135 AMLSRVNALELFPQCLCLAPTYELALQTGRVVERMGRFCVDVQVMYAIRGNRIPRGTDIT 194
Query: 161 KLEAGAQVVVGTPGRVFDM-ISRGALSTKQIRMFVLDEADEML-SRGFKDQIYDVFKHLN 218
K Q+++GTPG V D R + +IR+FVLDEAD M+ ++GF DQ + + L
Sbjct: 195 K-----QIIIGTPGTVLDWCFKRKLIDLTKIRVFVLDEADVMIDTQGFSDQSIRIQRALP 249
Query: 219 NDVQVILLSATMPADVLDVSMKFMRDPIKILVKKEELTL 257
+ Q++L SAT V + + + DP I ++KEELTL
Sbjct: 250 SGCQMLLFSATFEDSVWQFAERIIPDPNVIKLRKEELTL 288
>UNIPROTKB|Q29024 [details] [associations]
symbol:DDX39B "Spliceosome RNA helicase DDX39B"
species:9823 "Sus scrofa" [GO:0016607 "nuclear speck" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0046784 "intronless viral
mRNA export from host nucleus" evidence=IEA] [GO:0043008
"ATP-dependent protein binding" evidence=IEA] [GO:0030621 "U4 snRNA
binding" evidence=IEA] [GO:0017070 "U6 snRNA binding" evidence=IEA]
[GO:0010501 "RNA secondary structure unwinding" evidence=IEA]
[GO:0005688 "U6 snRNP" evidence=IEA] [GO:0005687 "U4 snRNP"
evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IEA]
[GO:0000346 "transcription export complex" evidence=IEA]
[GO:0000245 "spliceosomal complex assembly" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005737 GO:GO:0016607
GO:GO:0005681 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0000245 GO:GO:0004004 EMBL:AJ251914 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0010501 GO:GO:0017070
HOVERGEN:HBG107334 OrthoDB:EOG4XSKPX GeneTree:ENSGT00660000095549
CTD:7919 KO:K12812 OMA:NAENPAI GO:GO:0000346 GO:GO:0005687
GO:GO:0005688 GO:GO:0030621 GO:GO:0046784 EMBL:Z34846 PIR:I47126
RefSeq:NP_001005157.1 UniGene:Ssc.11719 ProteinModelPortal:Q29024
SMR:Q29024 STRING:Q29024 PRIDE:Q29024 Ensembl:ENSSSCT00000001529
GeneID:448813 KEGG:ssc:448813 ArrayExpress:Q29024 Uniprot:Q29024
Length = 428
Score = 350 (128.3 bits), Expect = 6.0e-32, P = 6.0e-32
Identities = 92/262 (35%), Positives = 137/262 (52%)
Query: 1 MAEQRGDN-WEDPKNGPAENEAEQPAYNGPPGMAVDGLIETNWDHVAENFDDMELSEELL 59
MAE DN D ++ E A P V G + H + F D L ELL
Sbjct: 1 MAENDVDNELLDYEDDEVETAAGGDGAEAPAKKDVKGSYVSI--H-SSGFRDFLLKPELL 57
Query: 60 RGIYAYGFEKPSAIQQRAIIPCVRGNDVIAQAQSGTGKTATFSISILQQVDQNIKECQAL 119
R I GFE PS +Q I + G DV+ QA+SG GKTA F ++ LQQ++ + L
Sbjct: 58 RAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQVSVL 117
Query: 120 ILAPTRELAQQIQKVVIALGDFM-SVSCHACIGGTIVRDDIRKLEAGA-QVVVGTPGRVF 177
++ TRELA QI K +M +V GG ++ D L+ +VVGTPGR+
Sbjct: 118 VMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRIL 177
Query: 178 DMISRGALSTKQIRMFVLDEADEMLSR-GFKDQIYDVFKHLNNDVQVILLSATMPADVLD 236
+ +L+ K I+ F+LDE D+ML + + + ++F+ ++ QV++ SAT+ ++
Sbjct: 178 ALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIRP 237
Query: 237 VSMKFMRDPIKILVKKE-ELTL 257
V KFM+DP++I V E +LTL
Sbjct: 238 VCRKFMQDPMEIFVDDETKLTL 259
>UNIPROTKB|Q5WR10 [details] [associations]
symbol:DDX39B "Spliceosome RNA helicase DDX39B"
species:9615 "Canis lupus familiaris" [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0046784
"intronless viral mRNA export from host nucleus" evidence=IEA]
[GO:0043008 "ATP-dependent protein binding" evidence=IEA]
[GO:0030621 "U4 snRNA binding" evidence=IEA] [GO:0017070 "U6 snRNA
binding" evidence=IEA] [GO:0010501 "RNA secondary structure
unwinding" evidence=IEA] [GO:0005688 "U6 snRNP" evidence=IEA]
[GO:0005687 "U4 snRNP" evidence=IEA] [GO:0005681 "spliceosomal
complex" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IEA] [GO:0000346 "transcription export complex"
evidence=IEA] [GO:0000245 "spliceosomal complex assembly"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0016607 GO:GO:0005681 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0000245 GO:GO:0004004 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0010501 GO:GO:0017070
HOVERGEN:HBG107334 OrthoDB:EOG4XSKPX GeneTree:ENSGT00660000095549
CTD:7919 KO:K12812 OMA:NAENPAI GO:GO:0000346 GO:GO:0005687
GO:GO:0005688 GO:GO:0030621 GO:GO:0046784 EMBL:AY423389
RefSeq:NP_001014399.1 UniGene:Cfa.10131 ProteinModelPortal:Q5WR10
SMR:Q5WR10 Ensembl:ENSCAFT00000036511 GeneID:474839 KEGG:cfa:474839
InParanoid:Q5WR10 NextBio:20850784 Uniprot:Q5WR10
Length = 428
Score = 349 (127.9 bits), Expect = 7.7e-32, P = 7.7e-32
Identities = 87/247 (35%), Positives = 132/247 (53%)
Query: 18 ENEAEQPAYNGPPGMAVDGLIETNWDHVA---ENFDDMELSEELLRGIYAYGFEKPSAIQ 74
E+E E A G G + +V+ F D L ELLR I GFE PS +Q
Sbjct: 15 EDEVETAA--GGDGSEAPAKKDVKGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQ 72
Query: 75 QRAIIPCVRGNDVIAQAQSGTGKTATFSISILQQVDQNIKECQALILAPTRELAQQIQKV 134
I + G DV+ QA+SG GKTA F ++ LQQ++ + L++ TRELA QI K
Sbjct: 73 HECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQVSVLVMCHTRELAFQISKE 132
Query: 135 VIALGDFM-SVSCHACIGGTIVRDDIRKLEAGA-QVVVGTPGRVFDMISRGALSTKQIRM 192
+M +V GG ++ D L+ +VVGTPGR+ + +L+ K I+
Sbjct: 133 YERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRILALARNKSLNLKHIKH 192
Query: 193 FVLDEADEMLSR-GFKDQIYDVFKHLNNDVQVILLSATMPADVLDVSMKFMRDPIKILVK 251
F+LDE D+ML + + + ++F+ ++ QV++ SAT+ ++ V KFM+DP++I V
Sbjct: 193 FILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIRPVCRKFMQDPMEIFVD 252
Query: 252 KE-ELTL 257
E +LTL
Sbjct: 253 DETKLTL 259
>UNIPROTKB|Q48AV0 [details] [associations]
symbol:CPS_0042 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 RefSeq:YP_266818.1 ProteinModelPortal:Q48AV0
GeneID:3521124 KEGG:cps:CPS_0042 PATRIC:21463513 OMA:AITESAY
BioCyc:CPSY167879:GI48-153-MONOMER Uniprot:Q48AV0
Length = 420
Score = 348 (127.6 bits), Expect = 9.8e-32, P = 9.8e-32
Identities = 75/200 (37%), Positives = 116/200 (58%)
Query: 49 FDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGNDVIAQAQSGTGKTATFSISILQQ 108
F L LL+ I +++P+ IQ+++I + +DV+A+AQ+GTGKTA F++ ILQQ
Sbjct: 7 FSSFSLDSTLLKAITESAYDEPTEIQKQSIPLILAKHDVMARAQTGTGKTAAFALPILQQ 66
Query: 109 VD--QNIK-ECQALILAPTRELAQQIQKVVIALGDFMSVSCHACIGGTIVRDDIRKLEAG 165
+ Q K E +AL+L PTRELAQQ+ K G F V+ GG + I +L+ G
Sbjct: 67 LISVQPCKPELRALVLTPTRELAQQVHKSFCHYGQFTDVTIGIAYGGVSTKKQISELKVG 126
Query: 166 AQVVVGTPGRVFDMISRGALSTKQIRMFVLDEADEMLSRGFKDQIYDVFKHLNNDVQVIL 225
+++ TPGR+ D++ ++S I V DEAD ML GFK++I + ++L Q +L
Sbjct: 127 VDILIATPGRLLDLLRTESVSLSNIETLVFDEADRMLDMGFKEEIDQITQYLPKTKQTLL 186
Query: 226 LSATMPADVLDVSMKFMRDP 245
SAT D+ +S + +P
Sbjct: 187 FSATFADDIYKMSKNILVEP 206
>UNIPROTKB|Q9DGP9 [details] [associations]
symbol:deadsouth "ATP-dependent RNA helicase DDX25"
species:8355 "Xenopus laevis" [GO:0003723 "RNA binding"
evidence=ISS] [GO:0003724 "RNA helicase activity" evidence=ISS]
[GO:0006200 "ATP catabolic process" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0032019 "mitochondrial cloud" evidence=IDA]
[GO:0045495 "pole plasm" evidence=IDA] [GO:0043186 "P granule"
evidence=IDA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0016887 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0045495 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
GO:GO:0032019 HSSP:Q9UHL0 HOVERGEN:HBG107989 CTD:29118
EMBL:AF190623 RefSeq:NP_001082017.1 UniGene:Xl.670
ProteinModelPortal:Q9DGP9 SMR:Q9DGP9 PRIDE:Q9DGP9 GeneID:398180
KEGG:xla:398180 Xenbase:XB-GENE-958142 Uniprot:Q9DGP9
Length = 483
Score = 348 (127.6 bits), Expect = 9.8e-32, P = 9.8e-32
Identities = 102/268 (38%), Positives = 147/268 (54%)
Query: 6 GDNWEDPKNGPAENEAEQPAYN---------GPPGMAVDGLIETNWDHVAENFDDMELSE 56
GD+ ED + G E+ A N P + V T+ ++F+++ L
Sbjct: 47 GDDEEDVRRGHIEDLANHSLLNKLLRRTLVDSPHNVEVLQRDPTSPLFSVKSFEELHLKN 106
Query: 57 ELLRGIYAYGFEKPSAIQQRAIIPCVRGN---DVIAQAQSGTGKTATFSISILQQVDQNI 113
ELLRGIYA GF +PS IQ+ A+ P + + ++IAQ+QSGTGKTA F +++L +VD N
Sbjct: 107 ELLRGIYAMGFNRPSKIQENAL-PMMLADPPQNLIAQSQSGTGKTAAFVLAMLSRVDANK 165
Query: 114 KECQALILAPTRELAQQIQKVVIALGDFMS-VSCHACIGGTIVRDDIRKLEAGAQVVVGT 172
K Q + L+PT ELA Q KVV +G F + + + G R LEA Q+V+GT
Sbjct: 166 KYPQCICLSPTFELALQTGKVVEEMGKFCAGIEVIYALRGNRPGKGSR-LEA--QIVIGT 222
Query: 173 PGRVFDMISRGALST-KQIRMFVLDEADEMLS-RGFKDQIYDVFKHLNNDVQVILLSATM 230
PG V D + L T + I +FVLDEAD M++ +G D V + + Q++L SAT
Sbjct: 223 PGTVLDWCFKLRLITVENISVFVLDEADVMINVQGHSDHSVRVKRSMPKSCQMLLFSATF 282
Query: 231 PADVLDVSMKFMRDPIKILVKKEELTLE 258
V + + + DP I +KKEELTL+
Sbjct: 283 EDSVWAFAERIVPDPNIIKLKKEELTLK 310
>TIGR_CMR|CPS_0042 [details] [associations]
symbol:CPS_0042 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 RefSeq:YP_266818.1 ProteinModelPortal:Q48AV0
GeneID:3521124 KEGG:cps:CPS_0042 PATRIC:21463513 OMA:AITESAY
BioCyc:CPSY167879:GI48-153-MONOMER Uniprot:Q48AV0
Length = 420
Score = 348 (127.6 bits), Expect = 9.8e-32, P = 9.8e-32
Identities = 75/200 (37%), Positives = 116/200 (58%)
Query: 49 FDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGNDVIAQAQSGTGKTATFSISILQQ 108
F L LL+ I +++P+ IQ+++I + +DV+A+AQ+GTGKTA F++ ILQQ
Sbjct: 7 FSSFSLDSTLLKAITESAYDEPTEIQKQSIPLILAKHDVMARAQTGTGKTAAFALPILQQ 66
Query: 109 VD--QNIK-ECQALILAPTRELAQQIQKVVIALGDFMSVSCHACIGGTIVRDDIRKLEAG 165
+ Q K E +AL+L PTRELAQQ+ K G F V+ GG + I +L+ G
Sbjct: 67 LISVQPCKPELRALVLTPTRELAQQVHKSFCHYGQFTDVTIGIAYGGVSTKKQISELKVG 126
Query: 166 AQVVVGTPGRVFDMISRGALSTKQIRMFVLDEADEMLSRGFKDQIYDVFKHLNNDVQVIL 225
+++ TPGR+ D++ ++S I V DEAD ML GFK++I + ++L Q +L
Sbjct: 127 VDILIATPGRLLDLLRTESVSLSNIETLVFDEADRMLDMGFKEEIDQITQYLPKTKQTLL 186
Query: 226 LSATMPADVLDVSMKFMRDP 245
SAT D+ +S + +P
Sbjct: 187 FSATFADDIYKMSKNILVEP 206
>UNIPROTKB|E7EMV8 [details] [associations]
symbol:EIF4A2 "Eukaryotic initiation factor 4A-II"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR011545
Pfam:PF00270 GO:GO:0005524 GO:GO:0003676 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 EMBL:AC112907 HGNC:HGNC:3284
ChiTaRS:EIF4A2 IPI:IPI00927069 ProteinModelPortal:E7EMV8 SMR:E7EMV8
Ensembl:ENST00000445596 ArrayExpress:E7EMV8 Bgee:E7EMV8
Uniprot:E7EMV8
Length = 98
Score = 347 (127.2 bits), Expect = 1.3e-31, P = 1.3e-31
Identities = 64/85 (75%), Positives = 75/85 (88%)
Query: 26 YNGPPGMAVDGLIETNWDHVAENFDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGN 85
+ GP GM DG+IE+NW+ + +NFDDM L E LLRGIYAYGFEKPSAIQQRAIIPC++G
Sbjct: 12 HGGPEGMDPDGVIESNWNEIVDNFDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGY 71
Query: 86 DVIAQAQSGTGKTATFSISILQQVD 110
DVIAQAQSGTGKTATF+ISILQQ++
Sbjct: 72 DVIAQAQSGTGKTATFAISILQQLE 96
>UNIPROTKB|I3L3F6 [details] [associations]
symbol:EIF4A3 "Eukaryotic initiation factor 4A-III"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0048026 "positive regulation of mRNA splicing, via spliceosome"
evidence=IEA] InterPro:IPR011545 Pfam:PF00270 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 PROSITE:PS51192 GO:GO:0008026
EMBL:AC087741 InterPro:IPR014014 PROSITE:PS51195 HGNC:HGNC:18683
ChiTaRS:EIF4A3 Ensembl:ENST00000571793 Bgee:I3L3F6 Uniprot:I3L3F6
Length = 133
Score = 347 (127.2 bits), Expect = 1.3e-31, P = 1.3e-31
Identities = 71/98 (72%), Positives = 82/98 (83%)
Query: 45 VAENFDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGNDVIAQAQSGTGKTATFSIS 104
V FD M L E+LLRGIYAYGFEKPSAIQQRAI ++G DVIAQ+QSGTGKTATFSIS
Sbjct: 36 VTPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSIS 95
Query: 105 ILQQVDQNIKECQALILAPTRELAQQIQKVVIALGDFM 142
+LQ +D ++E QALILAPTRELA QIQK ++ALGD+M
Sbjct: 96 VLQCLDIQVRETQALILAPTRELAVQIQKGLLALGDYM 133
>ZFIN|ZDB-GENE-040426-1259 [details] [associations]
symbol:ddx39b "DEAD (Asp-Glu-Ala-Asp) box
polypeptide 39B" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-040426-1259 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:BX511233
GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOVERGEN:HBG107334
OrthoDB:EOG4XSKPX GeneTree:ENSGT00660000095549 KO:K12812
OMA:NNPLINC EMBL:FP085397 EMBL:BC055240 IPI:IPI00502330
RefSeq:NP_957237.1 UniGene:Dr.5423 SMR:Q7SXU7 STRING:Q7SXU7
Ensembl:ENSDART00000052355 GeneID:393917 KEGG:dre:393917 CTD:393917
InParanoid:Q7SXU7 NextBio:20814893 Uniprot:Q7SXU7
Length = 435
Score = 347 (127.2 bits), Expect = 1.3e-31, P = 1.3e-31
Identities = 81/216 (37%), Positives = 123/216 (56%)
Query: 46 AENFDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGNDVIAQAQSGTGKTATFSISI 105
+ F D L ELLR I GFE PS +Q I + G DV+ QA+SG GKTA F ++
Sbjct: 51 SSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLAT 110
Query: 106 LQQVDQNIKECQALILAPTRELAQQIQKVVIALGDFM-SVSCHACIGGTIVRDDIRKLEA 164
LQQ++ + L++ TRELA QI K +M SV GG ++ D L+
Sbjct: 111 LQQLEPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPSVKVAVFFGGLSIKKDEEVLKK 170
Query: 165 GA-QVVVGTPGRVFDMISRGALSTKQIRMFVLDEADEMLSR-GFKDQIYDVFKHLNNDVQ 222
+ VVVGTPGR+ + +L+ + I+ F+LDE D+ML + + + ++F+ ++ Q
Sbjct: 171 ESPHVVVGTPGRILALSRNKSLNLRHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQ 230
Query: 223 VILLSATMPADVLDVSMKFMRDPIKILVKKE-ELTL 257
V++ SAT+ ++ V KFM+DP++I V E +LTL
Sbjct: 231 VMMFSATLSKEIRPVCRKFMQDPMEIFVDDETKLTL 266
>DICTYBASE|DDB_G0281553 [details] [associations]
symbol:helC "DEAD-box RNA helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 dictyBase:DDB_G0281553 GO:GO:0007275
GO:GO:0005524 GenomeReviews:CM000152_GR GO:GO:0003723
EMBL:AAFI02000042 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
OMA:PQAICLA HSSP:Q9UHL0 EMBL:AF002677 RefSeq:XP_640633.1
ProteinModelPortal:Q54TF8 EnsemblProtists:DDB0215338 GeneID:8623244
KEGG:ddi:DDB_G0281553 Uniprot:Q54TF8
Length = 465
Score = 346 (126.9 bits), Expect = 1.6e-31, P = 1.6e-31
Identities = 79/215 (36%), Positives = 135/215 (62%)
Query: 47 ENFDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRG-NDVIAQAQSGTGKTATFSISI 105
+ F+++ L ELL+G+YA G+ KPS IQ+ A+ ++ N++IAQ+QSGTGKTA F++ +
Sbjct: 70 KTFEELGLKPELLKGVYAMGYNKPSKIQEAALPIIIQSPNNLIAQSQSGTGKTAAFTLGM 129
Query: 106 LQQVDQNIKECQALILAPTRELAQQIQKVVIALGDFMSVSCHACIGGTIVRDDIRKLEAG 165
L VD +I QA+ ++PT+ELA Q +V+ +G F ++ I V ++
Sbjct: 130 LNCVDPSINAPQAICISPTKELALQTFEVISKIGQFSNIKPLLYISEIEVPKNVTN---- 185
Query: 166 AQVVVGTPGRVFDMISRGALSTKQIRMFVLDEADEMLS-RGFKDQIYDVFKHLNNDVQVI 224
QV++GTPG++ + + + LS K ++M VLDEAD ++ + +QI + + L ++V+V
Sbjct: 186 -QVIIGTPGKILENVIKKQLSVKFLKMVVLDEADFIVKMKNVPNQIAMINRLLPSNVKVC 244
Query: 225 LLSATMPADVLDVSMKFMRDPI-KILVKKEELTLE 258
L SAT V ++ K ++DP I +K++EL++E
Sbjct: 245 LFSATFSMGVEELIKKIVQDPYTSIRLKRQELSVE 279
>UNIPROTKB|Q5ZMC1 [details] [associations]
symbol:DDX19B "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 KO:K01529 GO:GO:0008026
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195 OMA:PQAICLA
GeneTree:ENSGT00530000063236 HOVERGEN:HBG107989 CTD:11269
EMBL:AADN02040672 UniGene:Gga.7753 EMBL:AJ719463 IPI:IPI00571485
RefSeq:NP_001006568.1 SMR:Q5ZMC1 Ensembl:ENSGALT00000039619
GeneID:426504 KEGG:gga:426504 InParanoid:Q5ZMC1 NextBio:20828056
Uniprot:Q5ZMC1
Length = 479
Score = 344 (126.2 bits), Expect = 2.6e-31, P = 2.6e-31
Identities = 86/219 (39%), Positives = 133/219 (60%)
Query: 47 ENFDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGN---DVIAQAQSGTGKTATFSI 103
++F+++ L +LL+G+YA GF +PS IQ+ A+ P + ++IAQ+QSGTGKTA F +
Sbjct: 92 KSFEELHLKPQLLQGVYAMGFNRPSKIQENAL-PMMLAEPPQNLIAQSQSGTGKTAAFVL 150
Query: 104 SILQQVDQNIKECQALILAPTRELAQQIQKVVIALGDFMSVS--CHACIGGTIVRDDIRK 161
++L +V+ K Q L L+PT ELA Q KV+ +G F +A G + R +K
Sbjct: 151 AMLSRVEPGNKYPQCLCLSPTYELALQTGKVIEQMGKFYPELKLAYAVRGNKLERG--QK 208
Query: 162 LEAGAQVVVGTPGRVFDMISR-GALSTKQIRMFVLDEADEMLS-RGFKDQIYDVFKHLNN 219
+ Q+V+GTPG V D S+ + K+I++FVLDEAD M++ +G +DQ + + L
Sbjct: 209 ISE--QIVIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPR 266
Query: 220 DVQVILLSATMPADVLDVSMKFMRDPIKILVKKEELTLE 258
D Q++L SAT V + K + DP I +K+EE TL+
Sbjct: 267 DCQMLLFSATFEDSVWKFAQKVVPDPNIIKLKREEETLD 305
>UNIPROTKB|Q8EIE5 [details] [associations]
symbol:dbpA "ATP-dependent RNA helicase DbpA"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268809 KO:K05591
OMA:HIDPARF ProtClustDB:PRK11776 InterPro:IPR005580 Pfam:PF03880
HSSP:P10081 RefSeq:NP_716527.1 ProteinModelPortal:Q8EIE5
GeneID:1168744 KEGG:son:SO_0897 PATRIC:23521451 Uniprot:Q8EIE5
Length = 458
Score = 344 (126.2 bits), Expect = 2.6e-31, P = 2.6e-31
Identities = 74/213 (34%), Positives = 117/213 (54%)
Query: 49 FDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGNDVIAQAQSGTGKTATFSISILQQ 108
F ++L ELL + + G+ + + IQ +++ + G DVI Q ++G+GKTA F + +L +
Sbjct: 3 FSTLKLKTELLENLSSMGYNEMTPIQAQSLPAILAGEDVIGQGKTGSGKTAAFGLGLLNK 62
Query: 109 VDQNIKECQALILAPTRELAQQIQKVVIALG-DFMSVSCHACIGGTIVRDDIRKLEAGAQ 167
+D Q L+L PTRELA Q+ + + L +V GG + I LE GA
Sbjct: 63 LDVKRFRIQTLVLCPTRELADQVAQEIRTLARGIHNVKVLTLCGGVPMGPQIGSLEHGAH 122
Query: 168 VVVGTPGRVFDMISRGALSTKQIRMFVLDEADEMLSRGFKDQIYDVFKHLNNDVQVILLS 227
++VGTPGR+ D + R L + M VLDEAD ML GF+ Q+ + + + Q +L S
Sbjct: 123 IIVGTPGRIVDHLDRNRLDLSNLNMLVLDEADRMLEMGFQPQLDAIIEQSPRERQTLLFS 182
Query: 228 ATMPADVLDVSMKFMRDPI--KILVKKEELTLE 258
AT P + ++ + M +P+ K V E+ T+E
Sbjct: 183 ATFPEQIQSIAKQIMYNPVMVKAAVTHEKNTIE 215
>TIGR_CMR|SO_0897 [details] [associations]
symbol:SO_0897 "ATP-dependent RNA helicase DbpA"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268809 KO:K05591
OMA:HIDPARF ProtClustDB:PRK11776 InterPro:IPR005580 Pfam:PF03880
HSSP:P10081 RefSeq:NP_716527.1 ProteinModelPortal:Q8EIE5
GeneID:1168744 KEGG:son:SO_0897 PATRIC:23521451 Uniprot:Q8EIE5
Length = 458
Score = 344 (126.2 bits), Expect = 2.6e-31, P = 2.6e-31
Identities = 74/213 (34%), Positives = 117/213 (54%)
Query: 49 FDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGNDVIAQAQSGTGKTATFSISILQQ 108
F ++L ELL + + G+ + + IQ +++ + G DVI Q ++G+GKTA F + +L +
Sbjct: 3 FSTLKLKTELLENLSSMGYNEMTPIQAQSLPAILAGEDVIGQGKTGSGKTAAFGLGLLNK 62
Query: 109 VDQNIKECQALILAPTRELAQQIQKVVIALG-DFMSVSCHACIGGTIVRDDIRKLEAGAQ 167
+D Q L+L PTRELA Q+ + + L +V GG + I LE GA
Sbjct: 63 LDVKRFRIQTLVLCPTRELADQVAQEIRTLARGIHNVKVLTLCGGVPMGPQIGSLEHGAH 122
Query: 168 VVVGTPGRVFDMISRGALSTKQIRMFVLDEADEMLSRGFKDQIYDVFKHLNNDVQVILLS 227
++VGTPGR+ D + R L + M VLDEAD ML GF+ Q+ + + + Q +L S
Sbjct: 123 IIVGTPGRIVDHLDRNRLDLSNLNMLVLDEADRMLEMGFQPQLDAIIEQSPRERQTLLFS 182
Query: 228 ATMPADVLDVSMKFMRDPI--KILVKKEELTLE 258
AT P + ++ + M +P+ K V E+ T+E
Sbjct: 183 ATFPEQIQSIAKQIMYNPVMVKAAVTHEKNTIE 215
>UNIPROTKB|Q83DM8 [details] [associations]
symbol:rhlE "ATP-dependent RNA helicase" species:227377
"Coxiella burnetii RSA 493" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:AE016828 GenomeReviews:AE016828_GR InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927 OMA:HLIKQHN
RefSeq:NP_819700.2 ProteinModelPortal:Q83DM8 GeneID:1208557
KEGG:cbu:CBU_0670 PATRIC:17930019 ProtClustDB:CLSK914228
BioCyc:CBUR227377:GJ7S-666-MONOMER Uniprot:Q83DM8
Length = 420
Score = 343 (125.8 bits), Expect = 3.3e-31, P = 3.3e-31
Identities = 77/213 (36%), Positives = 124/213 (58%)
Query: 48 NFDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGNDVIAQAQSGTGKTATFSISILQ 107
+F+ + LS ELLR I G+ +P+ +Q++AI ++ DV+ AQ+GTGKTA F++ +LQ
Sbjct: 11 SFEVLGLSAELLRAIREQGYVEPTPVQRQAIPVILQARDVMVTAQTGTGKTAGFTLPLLQ 70
Query: 108 QV-------DQNIKEC-QALILAPTRELAQQIQKVVIALGDFMSVSCHACIGGTIVRDDI 159
++ ++ K +ALIL PTRELA Q+ + V A G ++ + GG ++ I
Sbjct: 71 RLFVSRPPLQRSAKPVIRALILTPTRELAVQVFECVRAYGKYLPLKATVVHGGVSIKPQI 130
Query: 160 RKLEAGAQVVVGTPGRVFDMISRGALSTKQIRMFVLDEADEMLSRGFKDQIYDVFKHLNN 219
L G ++V TPGR+ D++++G L+ ++ FVLDEAD ML GF I + K L
Sbjct: 131 NHLRRGVDILVATPGRLLDLVNQGVLNLSRVEFFVLDEADRMLDMGFLPDIRRILKLLPE 190
Query: 220 DVQVILLSATMPADVLDVSMKFMRDPIKILVKK 252
Q +L SAT ++ +++ K + P I V +
Sbjct: 191 SRQNLLFSATFSKEIKELTDKLLHSPALIEVAR 223
>TIGR_CMR|CBU_0670 [details] [associations]
symbol:CBU_0670 "ATP-dependent RNA helicase RhlE,
putative" species:227377 "Coxiella burnetii RSA 493" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE016828 GenomeReviews:AE016828_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927
OMA:HLIKQHN RefSeq:NP_819700.2 ProteinModelPortal:Q83DM8
GeneID:1208557 KEGG:cbu:CBU_0670 PATRIC:17930019
ProtClustDB:CLSK914228 BioCyc:CBUR227377:GJ7S-666-MONOMER
Uniprot:Q83DM8
Length = 420
Score = 343 (125.8 bits), Expect = 3.3e-31, P = 3.3e-31
Identities = 77/213 (36%), Positives = 124/213 (58%)
Query: 48 NFDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGNDVIAQAQSGTGKTATFSISILQ 107
+F+ + LS ELLR I G+ +P+ +Q++AI ++ DV+ AQ+GTGKTA F++ +LQ
Sbjct: 11 SFEVLGLSAELLRAIREQGYVEPTPVQRQAIPVILQARDVMVTAQTGTGKTAGFTLPLLQ 70
Query: 108 QV-------DQNIKEC-QALILAPTRELAQQIQKVVIALGDFMSVSCHACIGGTIVRDDI 159
++ ++ K +ALIL PTRELA Q+ + V A G ++ + GG ++ I
Sbjct: 71 RLFVSRPPLQRSAKPVIRALILTPTRELAVQVFECVRAYGKYLPLKATVVHGGVSIKPQI 130
Query: 160 RKLEAGAQVVVGTPGRVFDMISRGALSTKQIRMFVLDEADEMLSRGFKDQIYDVFKHLNN 219
L G ++V TPGR+ D++++G L+ ++ FVLDEAD ML GF I + K L
Sbjct: 131 NHLRRGVDILVATPGRLLDLVNQGVLNLSRVEFFVLDEADRMLDMGFLPDIRRILKLLPE 190
Query: 220 DVQVILLSATMPADVLDVSMKFMRDPIKILVKK 252
Q +L SAT ++ +++ K + P I V +
Sbjct: 191 SRQNLLFSATFSKEIKELTDKLLHSPALIEVAR 223
>TIGR_CMR|SO_1383 [details] [associations]
symbol:SO_1383 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:AE014299
GenomeReviews:AE014299_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
HSSP:Q58083 HOGENOM:HOG000268807 RefSeq:NP_717003.1
ProteinModelPortal:Q8EH47 GeneID:1169204 KEGG:son:SO_1383
PATRIC:23522420 OMA:SEVVHGE ProtClustDB:CLSK906234 Uniprot:Q8EH47
Length = 433
Score = 343 (125.8 bits), Expect = 3.3e-31, P = 3.3e-31
Identities = 81/215 (37%), Positives = 119/215 (55%)
Query: 49 FDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGNDVIAQAQSGTGKTATFSISILQQ 108
F+ E+LR I G++K + IQQ+AI RG DV+A AQ+GTGKTA F++ ILQ+
Sbjct: 3 FESFSFCPEILRAISDCGYQKMTPIQQQAIPAIRRGQDVLASAQTGTGKTAAFALPILQK 62
Query: 109 VDQNIKEC-----QALILAPTRELAQQIQKVVIALGDFMSVSCHACIGGTIVRDDIRKLE 163
+ +N E + LIL PTRELA Q+ + V A +++ S GG V +KL+
Sbjct: 63 MVENPSETLKSNTRVLILTPTRELAAQVAENVEAYSKYLNFSVLTIYGGVKVETQAQKLK 122
Query: 164 AGAQVVVGTPGRVFDMISRGALSTKQIRMFVLDEADEMLSRGFKDQIYDVFKHLNNDVQV 223
GA ++V TPGR+ + ++ LS + VLDEAD ML GF I + + +N Q
Sbjct: 123 RGADIIVATPGRLLEHLTACNLSLSSVDFLVLDEADRMLDMGFSADIQKILQAVNKKRQN 182
Query: 224 ILLSATMPADVLDVSMKFMRDPIKILVKKEELTLE 258
+L SAT + V ++ + M P I K+ T +
Sbjct: 183 LLFSATFSSAVKKLANEMMIKPQVISADKQNTTAD 217
>UNIPROTKB|F1NRN3 [details] [associations]
symbol:DDX20 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00530000062880 EMBL:AADN02044991 IPI:IPI00820769
ProteinModelPortal:F1NRN3 Ensembl:ENSGALT00000002285 Uniprot:F1NRN3
Length = 676
Score = 350 (128.3 bits), Expect = 3.6e-31, P = 3.6e-31
Identities = 82/201 (40%), Positives = 121/201 (60%)
Query: 48 NFDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVR-GNDVIAQAQSGTGKTATFSISIL 106
+F + LS +L G+ A GF +PS +Q +AI P R G D+I QA+SGTGKT FS L
Sbjct: 22 DFGSLLLSPPVLAGLEAAGFHRPSPVQLKAI-PLGRCGLDLIVQAKSGTGKTCVFSTIAL 80
Query: 107 QQVDQNIKECQALILAPTRELAQQIQKVVIALGDFMS-VSCHACIGGTIVRDDIRKLEAG 165
+ + Q LILAPTRE+A QI V+ +G M + CH IGGT + D +L+
Sbjct: 81 DALLLDSPATQVLILAPTREIAVQIHAVITTIGIKMEGLECHVFIGGTPLSQDKVRLKK- 139
Query: 166 AQVVVGTPGRVFDMISRGALSTKQIRMFVLDEADEMLSRG-FKDQIYDVFKHLNNDVQVI 224
+ VG+PGR+ +I L+T IR+F+LDEAD++L G F++QI ++ L + Q++
Sbjct: 140 CHIAVGSPGRIKQLIELDYLNTASIRLFILDEADKLLEEGSFQEQINWIYSSLPANKQML 199
Query: 225 LLSATMPADVLDVSMKFMRDP 245
+SAT P + + +MR+P
Sbjct: 200 AVSATYPESLANALTMYMREP 220
>UNIPROTKB|H3BQK0 [details] [associations]
symbol:DDX19B "HCG1998531, isoform CRA_g" species:9606
"Homo sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 EMBL:CH471241 EMBL:AC012184 HGNC:HGNC:2742
ChiTaRS:DDX19B SMR:H3BQK0 Ensembl:ENST00000563206 Uniprot:H3BQK0
Length = 484
Score = 342 (125.4 bits), Expect = 4.2e-31, P = 4.2e-31
Identities = 86/219 (39%), Positives = 133/219 (60%)
Query: 47 ENFDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGN---DVIAQAQSGTGKTATFSI 103
++F+++ L +LL+G+YA GF +PS IQ+ A+ P + ++IAQ+QSGTGKTA F +
Sbjct: 97 KSFEELRLKPQLLQGVYAMGFNRPSKIQENAL-PLMLAEPPQNLIAQSQSGTGKTAAFVL 155
Query: 104 SILQQVDQNIKECQALILAPTRELAQQIQKVVIALGDFMSVS--CHACIGGTIVRDDIRK 161
++L QV+ K Q L L+PT ELA Q KV+ +G F +A G + R +K
Sbjct: 156 AMLSQVEPANKYPQCLCLSPTYELALQTGKVIEQMGKFYPELKLAYAVRGNKLERG--QK 213
Query: 162 LEAGAQVVVGTPGRVFDMISR-GALSTKQIRMFVLDEADEMLS-RGFKDQIYDVFKHLNN 219
+ Q+V+GTPG V D S+ + K+I++FVLDEAD M++ +G +DQ + + L
Sbjct: 214 ISE--QIVIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPR 271
Query: 220 DVQVILLSATMPADVLDVSMKFMRDPIKILVKKEELTLE 258
+ Q++L SAT V + K + DP I +K+EE TL+
Sbjct: 272 NCQMLLFSATFEDSVWKFAQKVVPDPNVIKLKREEETLD 310
>UNIPROTKB|J3QL17 [details] [associations]
symbol:DDX25 "ATP-dependent RNA helicase DDX25"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
EMBL:AP000842 InterPro:IPR014014 PROSITE:PS51195 HGNC:HGNC:18698
ChiTaRS:DDX25 Ensembl:ENST00000530414 Uniprot:J3QL17
Length = 468
Score = 342 (125.4 bits), Expect = 4.2e-31, P = 4.2e-31
Identities = 91/219 (41%), Positives = 133/219 (60%)
Query: 47 ENFDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGN---DVIAQAQSGTGKTATFSI 103
+ F+++ L EELL+GIYA GF +PS IQ+ A+ P + + ++IAQ+QSGTGKTA F +
Sbjct: 100 KTFEELRLKEELLKGIYAMGFNRPSKIQEMAL-PMMLAHPPQNLIAQSQSGTGKTAAFVL 158
Query: 104 SILQQVDQNIKECQALILAPTRELAQQIQKVVIALGDF-MSVSC-HACIGGTIVRD-DIR 160
++L +V+ Q L LAPT ELA Q +VV +G F + V +A G I R DI
Sbjct: 159 AMLSRVNALELFPQCLCLAPTYELALQTGRVVEQMGKFCVDVQVMYAIRGNRIPRGTDIT 218
Query: 161 KLEAGAQVVVGTPGRVFDMISRGAL-STKQIRMFVLDEADEML-SRGFKDQIYDVFKHLN 218
K Q+++GTPG V D + L +IR+FVLDEAD M+ ++GF D + + L
Sbjct: 219 K-----QIIIGTPGTVLDWCFKLKLIDLTKIRVFVLDEADVMIDTQGFSDHSIRIQRALP 273
Query: 219 NDVQVILLSATMPADVLDVSMKFMRDPIKILVKKEELTL 257
++ Q++L SAT V + + + DP I ++KEELTL
Sbjct: 274 SECQMLLFSATFEDSVWHFAERIIPDPNVIKLRKEELTL 312
>UNIPROTKB|Q9UHL0 [details] [associations]
symbol:DDX25 "ATP-dependent RNA helicase DDX25"
species:9606 "Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007286 "spermatid development" evidence=ISS] [GO:0005524 "ATP
binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0006406 "mRNA export from
nucleus" evidence=ISS] [GO:0006417 "regulation of translation"
evidence=ISS] [GO:0033391 "chromatoid body" evidence=ISS]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0007275
GO:GO:0005524 GO:GO:0005634 GO:GO:0006417 EMBL:CH471065
GO:GO:0007286 GO:GO:0003723 GO:GO:0006406 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0033391 GO:GO:0004004
eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 HOVERGEN:HBG107989 CTD:29118 OrthoDB:EOG4NS3BD
EMBL:AF155140 EMBL:AY735312 EMBL:AY735301 EMBL:AY735302
EMBL:AY735303 EMBL:AY735304 EMBL:AY735305 EMBL:AY735306
EMBL:AY735307 EMBL:AY735308 EMBL:AY735309 EMBL:AY735310
EMBL:AY735311 EMBL:AK312772 EMBL:BC035388 EMBL:BC050360
IPI:IPI00296139 IPI:IPI00759454 RefSeq:NP_037396.3
UniGene:Hs.420263 PDB:2RB4 PDBsum:2RB4 ProteinModelPortal:Q9UHL0
SMR:Q9UHL0 STRING:Q9UHL0 PhosphoSite:Q9UHL0 DMDM:61222937
PaxDb:Q9UHL0 PRIDE:Q9UHL0 Ensembl:ENST00000263576 GeneID:29118
KEGG:hsa:29118 UCSC:uc001qcz.4 GeneCards:GC11P125773
HGNC:HGNC:18698 HPA:HPA020090 HPA:HPA020137 MIM:607663
neXtProt:NX_Q9UHL0 PharmGKB:PA38644 InParanoid:Q9UHL0 OMA:WHFAERI
PhylomeDB:Q9UHL0 ChiTaRS:DDX25 EvolutionaryTrace:Q9UHL0
GenomeRNAi:29118 NextBio:52207 ArrayExpress:Q9UHL0 Bgee:Q9UHL0
CleanEx:HS_DDX25 Genevestigator:Q9UHL0 GermOnline:ENSG00000109832
Uniprot:Q9UHL0
Length = 483
Score = 342 (125.4 bits), Expect = 4.2e-31, P = 4.2e-31
Identities = 91/219 (41%), Positives = 133/219 (60%)
Query: 47 ENFDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGN---DVIAQAQSGTGKTATFSI 103
+ F+++ L EELL+GIYA GF +PS IQ+ A+ P + + ++IAQ+QSGTGKTA F +
Sbjct: 97 KTFEELRLKEELLKGIYAMGFNRPSKIQEMAL-PMMLAHPPQNLIAQSQSGTGKTAAFVL 155
Query: 104 SILQQVDQNIKECQALILAPTRELAQQIQKVVIALGDF-MSVSC-HACIGGTIVRD-DIR 160
++L +V+ Q L LAPT ELA Q +VV +G F + V +A G I R DI
Sbjct: 156 AMLSRVNALELFPQCLCLAPTYELALQTGRVVEQMGKFCVDVQVMYAIRGNRIPRGTDIT 215
Query: 161 KLEAGAQVVVGTPGRVFDMISRGAL-STKQIRMFVLDEADEML-SRGFKDQIYDVFKHLN 218
K Q+++GTPG V D + L +IR+FVLDEAD M+ ++GF D + + L
Sbjct: 216 K-----QIIIGTPGTVLDWCFKLKLIDLTKIRVFVLDEADVMIDTQGFSDHSIRIQRALP 270
Query: 219 NDVQVILLSATMPADVLDVSMKFMRDPIKILVKKEELTL 257
++ Q++L SAT V + + + DP I ++KEELTL
Sbjct: 271 SECQMLLFSATFEDSVWHFAERIIPDPNVIKLRKEELTL 309
>UNIPROTKB|Q9UMR2 [details] [associations]
symbol:DDX19B "ATP-dependent RNA helicase DDX19B"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0005643 "nuclear pore" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0031965 "nuclear
membrane" evidence=IEA] [GO:0004386 "helicase activity"
evidence=TAS] [GO:0006406 "mRNA export from nucleus" evidence=TAS]
[GO:0005635 "nuclear envelope" evidence=IDA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005737 GO:GO:0015031
GO:GO:0031965 GO:GO:0005643 GO:GO:0003723 GO:GO:0004386
GO:GO:0006406 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107989
OrthoDB:EOG46MBJK EMBL:CH471241 EMBL:AJ237946 EMBL:AF353720
EMBL:AL136639 EMBL:CR457215 EMBL:CR533509 EMBL:AK027378
EMBL:AK301938 EMBL:AK302107 EMBL:AK316346 EMBL:AC012184
EMBL:BC003626 EMBL:BC010008 IPI:IPI00008943 IPI:IPI00027599
IPI:IPI00556368 IPI:IPI00939593 RefSeq:NP_001014449.1
RefSeq:NP_001014451.1 RefSeq:NP_001244101.1 RefSeq:NP_001244102.1
RefSeq:NP_001244103.1 RefSeq:NP_009173.1 UniGene:Hs.221761 PDB:3EWS
PDB:3FHC PDB:3FHT PDB:3FMO PDB:3FMP PDB:3G0H PDBsum:3EWS
PDBsum:3FHC PDBsum:3FHT PDBsum:3FMO PDBsum:3FMP PDBsum:3G0H
ProteinModelPortal:Q9UMR2 SMR:Q9UMR2 DIP:DIP-48486N IntAct:Q9UMR2
MINT:MINT-1387516 STRING:Q9UMR2 PhosphoSite:Q9UMR2 DMDM:10719979
PaxDb:Q9UMR2 PRIDE:Q9UMR2 DNASU:11269 Ensembl:ENST00000288071
Ensembl:ENST00000355992 Ensembl:ENST00000393657
Ensembl:ENST00000451014 Ensembl:ENST00000563392
Ensembl:ENST00000568625 GeneID:11269 KEGG:hsa:11269 UCSC:uc002eyo.3
UCSC:uc002eyp.3 CTD:11269 GeneCards:GC16P070328 HGNC:HGNC:2742
HPA:CAB037284 MIM:605812 neXtProt:NX_Q9UMR2 PharmGKB:PA27208
InParanoid:Q9UMR2 OMA:HETIFEV PhylomeDB:Q9UMR2 ChiTaRS:DDX19B
EvolutionaryTrace:Q9UMR2 GenomeRNAi:11269 NextBio:42879
ArrayExpress:Q9UMR2 Bgee:Q9UMR2 CleanEx:HS_DDX19B
Genevestigator:Q9UMR2 GermOnline:ENSG00000157349 Uniprot:Q9UMR2
Length = 479
Score = 342 (125.4 bits), Expect = 4.2e-31, P = 4.2e-31
Identities = 86/219 (39%), Positives = 133/219 (60%)
Query: 47 ENFDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGN---DVIAQAQSGTGKTATFSI 103
++F+++ L +LL+G+YA GF +PS IQ+ A+ P + ++IAQ+QSGTGKTA F +
Sbjct: 92 KSFEELRLKPQLLQGVYAMGFNRPSKIQENAL-PLMLAEPPQNLIAQSQSGTGKTAAFVL 150
Query: 104 SILQQVDQNIKECQALILAPTRELAQQIQKVVIALGDFMSVS--CHACIGGTIVRDDIRK 161
++L QV+ K Q L L+PT ELA Q KV+ +G F +A G + R +K
Sbjct: 151 AMLSQVEPANKYPQCLCLSPTYELALQTGKVIEQMGKFYPELKLAYAVRGNKLERG--QK 208
Query: 162 LEAGAQVVVGTPGRVFDMISR-GALSTKQIRMFVLDEADEMLS-RGFKDQIYDVFKHLNN 219
+ Q+V+GTPG V D S+ + K+I++FVLDEAD M++ +G +DQ + + L
Sbjct: 209 ISE--QIVIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPR 266
Query: 220 DVQVILLSATMPADVLDVSMKFMRDPIKILVKKEELTLE 258
+ Q++L SAT V + K + DP I +K+EE TL+
Sbjct: 267 NCQMLLFSATFEDSVWKFAQKVVPDPNVIKLKREEETLD 305
>DICTYBASE|DDB_G0269932 [details] [associations]
symbol:uap56 "ATP-dependent RNA helicase"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0003723 "RNA binding" evidence=ISS] [GO:0000398
"mRNA splicing, via spliceosome" evidence=ISS] [GO:0000348 "mRNA
branch site recognition" evidence=ISS] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 dictyBase:DDB_G0269932
GO:GO:0005524 EMBL:AAFI02000005 GenomeReviews:CM000150_GR
GO:GO:0005681 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K12812 GO:GO:0000348 RefSeq:XP_646415.1
ProteinModelPortal:Q55CR6 SMR:Q55CR6 PRIDE:Q55CR6
EnsemblProtists:DDB0233387 GeneID:8617372 KEGG:ddi:DDB_G0269932
InParanoid:Q55CR6 OMA:GGANMNP ProtClustDB:CLSZ2429041
Uniprot:Q55CR6
Length = 428
Score = 341 (125.1 bits), Expect = 5.4e-31, P = 5.4e-31
Identities = 86/222 (38%), Positives = 121/222 (54%)
Query: 44 HVA---ENFDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGNDVIAQAQSGTGKTAT 100
HVA F + L EL R I GFE PS +Q I + G DVI QA+SG GKTA
Sbjct: 42 HVAMHSSGFREFLLKPELERVIGDCGFEHPSEVQNECIPQAILGTDVICQAKSGMGKTAV 101
Query: 101 FSISILQQVDQNIKECQALILAPTRELAQQIQKVVIALGDFM-SVSCHACIGGTIVRD-- 157
F +S LQQ+D N L+L TRELA QI ++ +V GG V+
Sbjct: 102 FVLSTLQQIDNNPNGITTLVLCNTRELAYQICDEFDRFTKYLPNVKTAVIYGGIPVQTHK 161
Query: 158 DIRKLEAGAQVVVGTPGRVFDMISRGALSTKQIRMFVLDEADEML-SRGFKDQIYDVFKH 216
D+ K E +++GTPGR+ + S GALS K+I+ F+LDE D ML S + + +FK
Sbjct: 162 DLIK-EKKPNIIIGTPGRILQLASEGALSLKEIKQFILDECDTMLESLDMRKDVQKIFKL 220
Query: 217 LNNDVQVILLSATMPADVLDVSMKFMRDPIKILVKK-EELTL 257
+ + QV++ SAT+ + + KFM +P++I + +LTL
Sbjct: 221 IPANKQVMMFSATLSDTIRPICKKFMNNPLEIYINDGSKLTL 262
>TIGR_CMR|GSU_0189 [details] [associations]
symbol:GSU_0189 "ATP-dependent RNA helicase DbpA"
species:243231 "Geobacter sulfurreducens PCA" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] [GO:0042254 "ribosome
biogenesis" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:AE017180 GenomeReviews:AE017180_GR InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268809 KO:K05591 ProtClustDB:PRK11776
InterPro:IPR005580 Pfam:PF03880 RefSeq:NP_951250.1
ProteinModelPortal:Q74GQ7 GeneID:2687824 KEGG:gsu:GSU0189
PATRIC:22023124 OMA:VAIASHC BioCyc:GSUL243231:GH27-128-MONOMER
Uniprot:Q74GQ7
Length = 460
Score = 341 (125.1 bits), Expect = 5.4e-31, P = 5.4e-31
Identities = 76/203 (37%), Positives = 113/203 (55%)
Query: 49 FDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGNDVIAQAQSGTGKTATFSISILQQ 108
F + L +LR + + G+ + + IQ ++ + G DVIA+A++G+GKTA F I +L +
Sbjct: 6 FSSLRLKAPMLRNLASLGYAEMTPIQAHSLPLILAGKDVIARAKTGSGKTAAFGIGLLSR 65
Query: 109 VDQNIKECQALILAPTRELAQQIQKVVIALGDFM-SVSCHACIGGTIVRDDIRKLEAGAQ 167
+D QAL+L PTRELA Q+ K + L F ++ GG + LE GA
Sbjct: 66 LDALSFRVQALVLCPTRELADQVGKELRRLARFTDNIKILTICGGVPFGPQLGSLEHGAH 125
Query: 168 VVVGTPGRVFDMISRGALSTKQIRMFVLDEADEMLSRGFKDQIYDVFKHLNNDVQVILLS 227
VV+GTPGR+ D + RG+L +R VLDEAD ML GF+D I + Q +L S
Sbjct: 126 VVIGTPGRLLDHLRRGSLDLSALRTLVLDEADRMLDMGFQDDISALIAAAPPKRQTLLFS 185
Query: 228 ATMPADVLDVSMKFMRDPIKILV 250
AT P + +S R+P+++ V
Sbjct: 186 ATYPDSIAAMSAGVQREPVEVSV 208
>RGD|1303136 [details] [associations]
symbol:Ddx19a "DEAD (Asp-Glu-Ala-Asp) box polypeptide 19A"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006917 "induction of apoptosis" evidence=IMP] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0010043
"response to zinc ion" evidence=IEP] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 RGD:1303136 RGD:1593382 GO:GO:0005524 GO:GO:0006917
GO:GO:0010043 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00530000063236
CTD:55308 HOVERGEN:HBG107989 OrthoDB:EOG46MBJK EMBL:BC079094
IPI:IPI00476885 RefSeq:NP_001005381.2 UniGene:Rn.228949 SMR:Q68FX3
Ensembl:ENSRNOT00000024793 GeneID:292022 KEGG:rno:292022
UCSC:RGD:1303136 NextBio:633623 Genevestigator:Q68FX3
Uniprot:Q68FX3
Length = 478
Score = 341 (125.1 bits), Expect = 5.4e-31, P = 5.4e-31
Identities = 84/219 (38%), Positives = 132/219 (60%)
Query: 47 ENFDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGN---DVIAQAQSGTGKTATFSI 103
++F+++ L +LL+G+YA GF +PS IQ+ A+ P + ++IAQ+QSGTGKTA F +
Sbjct: 91 KSFEELRLKPQLLQGVYAMGFNRPSKIQENAL-PMMLAEPPQNLIAQSQSGTGKTAAFVL 149
Query: 104 SILQQVDQNIKECQALILAPTRELAQQIQKVVIALGDFMSVS--CHACIGGTIVRDDIRK 161
++L +V+ + Q L L+PT ELA Q KV+ +G F +A G + R
Sbjct: 150 AMLSRVEPADRHPQCLCLSPTYELALQTGKVIEQMGKFHPELKLAYAVRGNKLERGQ--- 206
Query: 162 LEAGAQVVVGTPGRVFDMISR-GALSTKQIRMFVLDEADEMLS-RGFKDQIYDVFKHLNN 219
+ G Q+V+GTPG V D S+ + K+I++FVLDEAD M++ +G +DQ + + L
Sbjct: 207 -KVGEQIVIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPR 265
Query: 220 DVQVILLSATMPADVLDVSMKFMRDPIKILVKKEELTLE 258
+ Q++L SAT V + K + DP I +K+EE TL+
Sbjct: 266 NCQMLLFSATFEDSVWKFAQKVVPDPNIIKLKREEETLD 304
>RGD|1593382 [details] [associations]
symbol:Ddx19b "DEAD (Asp-Glu-Ala-As) box polypeptide 19B"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 RGD:1303136 RGD:1593382 GO:GO:0005524
GO:GO:0006917 GO:GO:0010043 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00530000063236
CTD:55308 HOVERGEN:HBG107989 OrthoDB:EOG46MBJK EMBL:BC079094
IPI:IPI00476885 RefSeq:NP_001005381.2 UniGene:Rn.228949 SMR:Q68FX3
Ensembl:ENSRNOT00000024793 GeneID:292022 KEGG:rno:292022
UCSC:RGD:1303136 NextBio:633623 Genevestigator:Q68FX3
Uniprot:Q68FX3
Length = 478
Score = 341 (125.1 bits), Expect = 5.4e-31, P = 5.4e-31
Identities = 84/219 (38%), Positives = 132/219 (60%)
Query: 47 ENFDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGN---DVIAQAQSGTGKTATFSI 103
++F+++ L +LL+G+YA GF +PS IQ+ A+ P + ++IAQ+QSGTGKTA F +
Sbjct: 91 KSFEELRLKPQLLQGVYAMGFNRPSKIQENAL-PMMLAEPPQNLIAQSQSGTGKTAAFVL 149
Query: 104 SILQQVDQNIKECQALILAPTRELAQQIQKVVIALGDFMSVS--CHACIGGTIVRDDIRK 161
++L +V+ + Q L L+PT ELA Q KV+ +G F +A G + R
Sbjct: 150 AMLSRVEPADRHPQCLCLSPTYELALQTGKVIEQMGKFHPELKLAYAVRGNKLERGQ--- 206
Query: 162 LEAGAQVVVGTPGRVFDMISR-GALSTKQIRMFVLDEADEMLS-RGFKDQIYDVFKHLNN 219
+ G Q+V+GTPG V D S+ + K+I++FVLDEAD M++ +G +DQ + + L
Sbjct: 207 -KVGEQIVIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPR 265
Query: 220 DVQVILLSATMPADVLDVSMKFMRDPIKILVKKEELTLE 258
+ Q++L SAT V + K + DP I +K+EE TL+
Sbjct: 266 NCQMLLFSATFEDSVWKFAQKVVPDPNIIKLKREEETLD 304
>UNIPROTKB|E9PTL9 [details] [associations]
symbol:Ddx19b "Protein Ddx19b" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 RGD:1593382 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 IPI:IPI00959699
Ensembl:ENSRNOT00000059034 ArrayExpress:E9PTL9 Uniprot:E9PTL9
Length = 482
Score = 341 (125.1 bits), Expect = 5.4e-31, P = 5.4e-31
Identities = 84/219 (38%), Positives = 132/219 (60%)
Query: 47 ENFDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGN---DVIAQAQSGTGKTATFSI 103
++F+++ L +LL+G+YA GF +PS IQ+ A+ P + ++IAQ+QSGTGKTA F +
Sbjct: 95 KSFEELRLKPQLLQGVYAMGFNRPSKIQENAL-PLMLAEPPQNLIAQSQSGTGKTAAFVL 153
Query: 104 SILQQVDQNIKECQALILAPTRELAQQIQKVVIALGDFMSVS--CHACIGGTIVRDDIRK 161
++L +V+ + Q L L+PT ELA Q KV+ +G F +A G + R
Sbjct: 154 AMLSRVEPADRHPQCLCLSPTYELALQTGKVIEQMGKFHPELKLAYAVRGNKLERGQ--- 210
Query: 162 LEAGAQVVVGTPGRVFDMISR-GALSTKQIRMFVLDEADEMLS-RGFKDQIYDVFKHLNN 219
+ G Q+V+GTPG V D S+ + K+I++FVLDEAD M++ +G +DQ + + L
Sbjct: 211 -KVGEQIVIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPR 269
Query: 220 DVQVILLSATMPADVLDVSMKFMRDPIKILVKKEELTLE 258
+ Q++L SAT V + K + DP I +K+EE TL+
Sbjct: 270 NCQMLLFSATFEDSVWKFAQKVVPDPNIIKLKREEETLD 308
>UNIPROTKB|P25888 [details] [associations]
symbol:rhlE "ATP-dependent RNA helicase" species:83333
"Escherichia coli K-12" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0042255 "ribosome assembly" evidence=IGI]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IDA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0003723
GO:GO:0005840 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0042255 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 EMBL:L02123 HOGENOM:HOG000268807 EMBL:X56307
PIR:E64816 RefSeq:NP_415318.1 RefSeq:YP_489070.1
ProteinModelPortal:P25888 SMR:P25888 DIP:DIP-10697N IntAct:P25888
MINT:MINT-1313387 PRIDE:P25888 EnsemblBacteria:EBESCT00000003075
EnsemblBacteria:EBESCT00000017437 GeneID:12930968 GeneID:945425
KEGG:ecj:Y75_p0770 KEGG:eco:b0797 PATRIC:32116795 EchoBASE:EB1217
EcoGene:EG11235 KO:K11927 OMA:HLIKQHN ProtClustDB:PRK10590
BioCyc:EcoCyc:EG11235-MONOMER BioCyc:ECOL316407:JW0781-MONOMER
Genevestigator:P25888 Uniprot:P25888
Length = 454
Score = 340 (124.7 bits), Expect = 6.9e-31, P = 6.9e-31
Identities = 77/211 (36%), Positives = 120/211 (56%)
Query: 48 NFDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGNDVIAQAQSGTGKTATFSISILQ 107
+FD + LS ++LR + G+ +P+ IQQ+AI + G D++A AQ+GTGKTA F++ +LQ
Sbjct: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61
Query: 108 QV------DQNIKECQALILAPTRELAQQIQKVVIALGDFMSVSCHACIGGTIVRDDIRK 161
+ + + +ALIL PTRELA QI + V ++++ GG + + K
Sbjct: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMK 121
Query: 162 LEAGAQVVVGTPGRVFDMISRGALSTKQIRMFVLDEADEMLSRGFKDQIYDVFKHLNNDV 221
L G V+V TPGR+ D+ + A+ Q+ + VLDEAD ML GF I V L
Sbjct: 122 LRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181
Query: 222 QVILLSATMPADVLDVSMKFMRDPIKILVKK 252
Q +L SAT D+ ++ K + +P++I V +
Sbjct: 182 QNLLFSATFSDDIKALAEKLLHNPLEIEVAR 212
>UNIPROTKB|B1Q2N1 [details] [associations]
symbol:DDX39 "ATP-dependent RNA helicase DDX39A"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR011545
Pfam:PF00270 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 UniGene:Hs.311609
HGNC:HGNC:17821 EMBL:AC008569 EMBL:AB254849 IPI:IPI00062206
SMR:B1Q2N1 STRING:B1Q2N1 Ensembl:ENST00000454233
Ensembl:ENST00000588692 UCSC:uc010dzm.1 HOVERGEN:HBG072062
Uniprot:B1Q2N1
Length = 267
Score = 340 (124.7 bits), Expect = 6.9e-31, P = 6.9e-31
Identities = 87/247 (35%), Positives = 129/247 (52%)
Query: 1 MAEQRGDNWEDPKNGPAENEAEQPAYNGPPGMAVDGLIETNWDHVAENFDDMELSEELLR 60
MAEQ +N + E +A Q + PP + G + H + F D L ELLR
Sbjct: 1 MAEQDVENDLLDYDEEEEPQAPQESTPAPPKKDIKGSYVSI--H-SSGFRDFLLKPELLR 57
Query: 61 GIYAYGFEKPSAIQQRAIIPCVRGNDVIAQAQSGTGKTATFSISILQQVDQNIKECQALI 120
I GFE PS +Q I + G DV+ QA+SG GKTA F ++ LQQ++ + L+
Sbjct: 58 AIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQIEPVNGQVTVLV 117
Query: 121 LAPTRELAQQIQKVVIALGDFM-SVSCHACIGGTIVRDDIRKLEAGA-QVVVGTPGRVFD 178
+ TRELA QI K +M SV GG ++ D L+ VVVGTPGR+
Sbjct: 118 MCHTRELAFQISKEYERFSKYMPSVKVSVFFGGLSIKKDEEVLKKNCPHVVVGTPGRILA 177
Query: 179 MISRGALSTKQIRMFVLDEADEMLSR-GFKDQIYDVFKHLNNDVQVILLSATMPADVLDV 237
++ + S K ++ FVLDE D+ML + + + ++F+ ++ Q ++ SAT+ D+ V
Sbjct: 178 LVRNRSFSLKNVKHFVLDECDKMLEQLDMRRDVQEIFRLTPHEKQCMMFSATLSKDIRPV 237
Query: 238 SMKFMRD 244
KFM+D
Sbjct: 238 CRKFMQD 244
>UNIPROTKB|Q485I3 [details] [associations]
symbol:dbpA "ATP-dependent RNA helicase DbpA"
species:167879 "Colwellia psychrerythraea 34H" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268809 KO:K05591 ProtClustDB:PRK11776
InterPro:IPR005580 Pfam:PF03880 RefSeq:YP_268282.1
ProteinModelPortal:Q485I3 STRING:Q485I3 GeneID:3521612
KEGG:cps:CPS_1540 PATRIC:21466289 OMA:THEKSTI
BioCyc:CPSY167879:GI48-1621-MONOMER Uniprot:Q485I3
Length = 468
Score = 340 (124.7 bits), Expect = 6.9e-31, P = 6.9e-31
Identities = 70/218 (32%), Positives = 121/218 (55%)
Query: 38 IETNWDHVAENFDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGNDVIAQAQSGTGK 97
+ TN + F + L ++L++ + + G+E+ + IQ + + ++G DVI +A++G+GK
Sbjct: 1 MSTNTTTSSLAFSSLSLKQDLVKNLSSLGYEQMTPIQAKTLPELLKGKDVIGEAKTGSGK 60
Query: 98 TATFSISILQQVDQNIKECQALILAPTRELAQQIQKVVIALG-DFMSVSCHACIGGTIVR 156
TA F +++L +++ Q++++ PTRELA Q+ K + L ++ GGT
Sbjct: 61 TAAFGLALLNKLEVKKFRIQSMVICPTRELADQVAKELRKLARGIHNIKILTLCGGTPFG 120
Query: 157 DDIRKLEAGAQVVVGTPGRVFDMISRGALSTKQIRMFVLDEADEMLSRGFKDQIYDVFKH 216
I LE GA V+VGTPGR+ + + +G L + + VLDEAD ML GF+ + ++
Sbjct: 121 PQIGSLEHGAHVIVGTPGRLEEHVIKGTLQLDNLNLLVLDEADRMLEMGFQAALDNIVGR 180
Query: 217 LNNDVQVILLSATMPADVLDVSMKFMRDPIKILVKKEE 254
D Q +L SAT P + +S M DP+ + + E
Sbjct: 181 TPLDRQTLLFSATFPDQIKSISESIMTDPVMVKIASSE 218
>UNIPROTKB|Q9KS53 [details] [associations]
symbol:VC1407 "ATP-dependent RNA helicase RhlE"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0008152 "metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GenomeReviews:AE003852_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 OMA:FRNLCAI HSSP:P10081 EMBL:AE004219 PIR:D82203
RefSeq:NP_231050.1 ProteinModelPortal:Q9KS53 DNASU:2614039
GeneID:2614039 KEGG:vch:VC1407 PATRIC:20081876
ProtClustDB:CLSK874358 Uniprot:Q9KS53
Length = 397
Score = 340 (124.7 bits), Expect = 6.9e-31, P = 6.9e-31
Identities = 79/207 (38%), Positives = 124/207 (59%)
Query: 48 NFDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGNDVIAQAQSGTGKTATFSISILQ 107
+F + LS+ L++ + G++KP+ IQ +AI ++G D+IA AQ+GTGKTA+F + IL+
Sbjct: 2 SFSQLGLSDVLVQTVAQLGYQKPTHIQTQAIPVILQGRDLIAAAQTGTGKTASFVLPILE 61
Query: 108 QV----DQNIKECQALILAPTRELAQQIQKVVIALGDFMSVSCHACIGGTIVRDDIRKLE 163
++ Q K +ALIL PTRELA Q+ + V G + A GG + ++L
Sbjct: 62 KLRQGQTQRKKRVRALILVPTRELAMQVAEKVEQYGKDTGLKSLAVFGGVDEQAQKQRLI 121
Query: 164 AGAQVVVGTPGRVFDMISRGALSTKQIRMFVLDEADEMLSRGFKDQIYDVFKHLNNDVQV 223
G V+V TPGR+ D+ + A+ ++I M VLDEAD ML GF + I + L ++VQ
Sbjct: 122 DGVDVLVATPGRLMDLYGQRAVYFEEIEMVVLDEADRMLDMGFIESINKIIDCLPSEVQF 181
Query: 224 ILLSATMPADVLDVSMKFMRDPIKILV 250
+L SAT+ V +++ +RDP +I +
Sbjct: 182 LLFSATLSRKVRELAKTAVRDPHEISI 208
>TIGR_CMR|CPS_1540 [details] [associations]
symbol:CPS_1540 "ATP-dependent RNA helicase DbpA"
species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] [GO:0008186 "RNA-dependent ATPase
activity" evidence=ISS] [GO:0019843 "rRNA binding" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:CP000083
GenomeReviews:CP000083_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268809 KO:K05591 ProtClustDB:PRK11776
InterPro:IPR005580 Pfam:PF03880 RefSeq:YP_268282.1
ProteinModelPortal:Q485I3 STRING:Q485I3 GeneID:3521612
KEGG:cps:CPS_1540 PATRIC:21466289 OMA:THEKSTI
BioCyc:CPSY167879:GI48-1621-MONOMER Uniprot:Q485I3
Length = 468
Score = 340 (124.7 bits), Expect = 6.9e-31, P = 6.9e-31
Identities = 70/218 (32%), Positives = 121/218 (55%)
Query: 38 IETNWDHVAENFDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGNDVIAQAQSGTGK 97
+ TN + F + L ++L++ + + G+E+ + IQ + + ++G DVI +A++G+GK
Sbjct: 1 MSTNTTTSSLAFSSLSLKQDLVKNLSSLGYEQMTPIQAKTLPELLKGKDVIGEAKTGSGK 60
Query: 98 TATFSISILQQVDQNIKECQALILAPTRELAQQIQKVVIALG-DFMSVSCHACIGGTIVR 156
TA F +++L +++ Q++++ PTRELA Q+ K + L ++ GGT
Sbjct: 61 TAAFGLALLNKLEVKKFRIQSMVICPTRELADQVAKELRKLARGIHNIKILTLCGGTPFG 120
Query: 157 DDIRKLEAGAQVVVGTPGRVFDMISRGALSTKQIRMFVLDEADEMLSRGFKDQIYDVFKH 216
I LE GA V+VGTPGR+ + + +G L + + VLDEAD ML GF+ + ++
Sbjct: 121 PQIGSLEHGAHVIVGTPGRLEEHVIKGTLQLDNLNLLVLDEADRMLEMGFQAALDNIVGR 180
Query: 217 LNNDVQVILLSATMPADVLDVSMKFMRDPIKILVKKEE 254
D Q +L SAT P + +S M DP+ + + E
Sbjct: 181 TPLDRQTLLFSATFPDQIKSISESIMTDPVMVKIASSE 218
>TIGR_CMR|VC_1407 [details] [associations]
symbol:VC_1407 "ATP-dependent RNA helicase RhlE"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GenomeReviews:AE003852_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 OMA:FRNLCAI HSSP:P10081 EMBL:AE004219 PIR:D82203
RefSeq:NP_231050.1 ProteinModelPortal:Q9KS53 DNASU:2614039
GeneID:2614039 KEGG:vch:VC1407 PATRIC:20081876
ProtClustDB:CLSK874358 Uniprot:Q9KS53
Length = 397
Score = 340 (124.7 bits), Expect = 6.9e-31, P = 6.9e-31
Identities = 79/207 (38%), Positives = 124/207 (59%)
Query: 48 NFDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGNDVIAQAQSGTGKTATFSISILQ 107
+F + LS+ L++ + G++KP+ IQ +AI ++G D+IA AQ+GTGKTA+F + IL+
Sbjct: 2 SFSQLGLSDVLVQTVAQLGYQKPTHIQTQAIPVILQGRDLIAAAQTGTGKTASFVLPILE 61
Query: 108 QV----DQNIKECQALILAPTRELAQQIQKVVIALGDFMSVSCHACIGGTIVRDDIRKLE 163
++ Q K +ALIL PTRELA Q+ + V G + A GG + ++L
Sbjct: 62 KLRQGQTQRKKRVRALILVPTRELAMQVAEKVEQYGKDTGLKSLAVFGGVDEQAQKQRLI 121
Query: 164 AGAQVVVGTPGRVFDMISRGALSTKQIRMFVLDEADEMLSRGFKDQIYDVFKHLNNDVQV 223
G V+V TPGR+ D+ + A+ ++I M VLDEAD ML GF + I + L ++VQ
Sbjct: 122 DGVDVLVATPGRLMDLYGQRAVYFEEIEMVVLDEADRMLDMGFIESINKIIDCLPSEVQF 181
Query: 224 ILLSATMPADVLDVSMKFMRDPIKILV 250
+L SAT+ V +++ +RDP +I +
Sbjct: 182 LLFSATLSRKVRELAKTAVRDPHEISI 208
>TAIR|locus:2087832 [details] [associations]
symbol:PMH1 "putative mitochondrial RNA helicase 1"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA;ISS] [GO:0003677 "DNA binding" evidence=IDA]
[GO:0003723 "RNA binding" evidence=IDA] [GO:0009409 "response to
cold" evidence=IEP] [GO:0009414 "response to water deprivation"
evidence=IMP] [GO:0009651 "response to salt stress" evidence=IMP]
[GO:0043234 "protein complex" evidence=IDA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0043234 GO:GO:0003677 GO:GO:0009651
GO:GO:0009409 GO:GO:0009414 GO:GO:0003723 EMBL:AB022215
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268800 ProtClustDB:CLSN2684125 EMBL:AY091091
EMBL:AJ010461 IPI:IPI00517476 PIR:T51341 RefSeq:NP_188870.1
UniGene:At.25190 ProteinModelPortal:Q9LUW6 SMR:Q9LUW6 IntAct:Q9LUW6
STRING:Q9LUW6 PaxDb:Q9LUW6 PRIDE:Q9LUW6 EnsemblPlants:AT3G22310.1
GeneID:821800 KEGG:ath:AT3G22310 GeneFarm:922 TAIR:At3g22310
InParanoid:Q9LUW6 OMA:VSQGRQV PhylomeDB:Q9LUW6
Genevestigator:Q9LUW6 GermOnline:AT3G22310 Uniprot:Q9LUW6
Length = 610
Score = 345 (126.5 bits), Expect = 8.7e-31, P = 8.7e-31
Identities = 74/204 (36%), Positives = 121/204 (59%)
Query: 51 DMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGNDVIAQAQSGTGKTATFSISILQQVD 110
D+ +S E+++ + G EK IQ+ + P + G D+I +A++GTGKT F I I+ ++
Sbjct: 120 DLGISPEIVKALKGRGIEKLFPIQKAVLEPAMEGRDMIGRARTGTGKTLAFGIPIIDKII 179
Query: 111 Q-NIKEC-----QALILAPTRELAQQIQKVVIALGDFMSVSCHACIGGTIVRDDIRKLEA 164
+ N K Q L+LAPTRELA+Q++K + C GGT + +R+L
Sbjct: 180 KFNAKHGRGKNPQCLVLAPTRELARQVEKEFRESAPSLDTIC--LYGGTPIGQQMRELNY 237
Query: 165 GAQVVVGTPGRVFDMISRGALSTKQIRMFVLDEADEMLSRGFKDQIYDVFKHLNNDVQVI 224
G V VGTPGR+ D++ RGAL+ +++ VLDEAD+ML GF + + + + L Q +
Sbjct: 238 GIDVAVGTPGRIIDLMKRGALNLSEVQFVVLDEADQMLQVGFAEDVEIILQKLPAKRQSM 297
Query: 225 LLSATMPADVLDVSMKFMRDPIKI 248
+ SATMP+ + ++ K++ +P+ I
Sbjct: 298 MFSATMPSWIRSLTKKYLNNPLTI 321
>UNIPROTKB|Q8EBV7 [details] [associations]
symbol:SO_3388 "ATP-dependent RNA helicase DEAD box family"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
RefSeq:NP_718942.1 ProteinModelPortal:Q8EBV7 GeneID:1171066
KEGG:son:SO_3388 PATRIC:23526456 OMA:SHLVRSK ProtClustDB:CLSK907144
Uniprot:Q8EBV7
Length = 409
Score = 339 (124.4 bits), Expect = 8.8e-31, P = 8.8e-31
Identities = 78/215 (36%), Positives = 114/215 (53%)
Query: 48 NFDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGNDVIAQAQSGTGKTATFSISILQ 107
+F + L+ +L+ + G+++P+ IQ AI + DV+A AQ+GTGKTA F++ ILQ
Sbjct: 2 SFSALSLNTQLVDTLAELGYQQPTPIQVEAIPAILTKQDVMAGAQTGTGKTAAFALPILQ 61
Query: 108 ------QVDQNIKECQALILAPTRELAQQIQKVVIALGDFMSVSCHACIGGTIVRDDIRK 161
Q D K +AL+L PTRELA Q+Q+ + + GG +
Sbjct: 62 LLMADNQSDHAAKAIRALVLVPTRELALQVQQSFVKYAKGTDIRVGIAYGGVSIEAQQAV 121
Query: 162 LEAGAQVVVGTPGRVFDMISRGALSTKQIRMFVLDEADEMLSRGFKDQIYDVFKHLNNDV 221
AG V++ TPGR+ D + +GAL+ Q+ V DEAD ML GF D+I V K +
Sbjct: 122 FNAGIDVLIATPGRLLDHLRQGALNLNQLNTLVFDEADRMLDMGFMDEIQAVLKQVPAQR 181
Query: 222 QVILLSATMPADVLDVSMKFMRDPIKILVKKEELT 256
Q +L SAT+ + S +RDP +I V K T
Sbjct: 182 QTLLFSATLDDSIFSFSKNLLRDPKRIEVAKPNTT 216
>UNIPROTKB|Q9KMW4 [details] [associations]
symbol:VC_A0204 "ATP-dependent RNA helicase RhlE"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0008152 "metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE003853 GenomeReviews:AE003853_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 KO:K11927 PIR:E82488
RefSeq:NP_232603.1 ProteinModelPortal:Q9KMW4 DNASU:2612352
GeneID:2612352 KEGG:vch:VCA0204 PATRIC:20084977 OMA:AISFCDA
ProtClustDB:CLSK869561 Uniprot:Q9KMW4
Length = 451
Score = 339 (124.4 bits), Expect = 8.8e-31, P = 8.8e-31
Identities = 77/212 (36%), Positives = 121/212 (57%)
Query: 49 FDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGNDVIAQAQSGTGKTATFSISILQQ 108
F + LS +L+ I G+ PS IQ +AI + G DV+A AQ+GTGKTA F++ IL+
Sbjct: 3 FTSLGLSAPILKAIEEKGYNTPSPIQLQAIPAVLAGKDVMAAAQTGTGKTAGFTLPILEL 62
Query: 109 VDQNIK----ECQALILAPTRELAQQIQKVVIALGDFMSVSCHACIGGTIVRDDIRKLEA 164
+ + K + +ALIL PTRELA QIQ V+ G + + GG + ++++
Sbjct: 63 LAKGPKVRANQVRALILTPTRELAAQIQDNVMLYGRHLPLKSAVVFGGVKINPQMQRMCK 122
Query: 165 GAQVVVGTPGRVFDMISRGALSTKQIRMFVLDEADEMLSRGFKDQIYDVFKHLNNDVQVI 224
GA ++V TPGR+ D+ ++ A+ Q+ + VLDEAD ML GF I+ + K L Q +
Sbjct: 123 GADILVATPGRLMDLYNQNAVKFDQLEILVLDEADRMLDMGFIRDIHKILKLLPEKRQNL 182
Query: 225 LLSATMPADVLDVSMKFMRDPIKILVKKEELT 256
L SAT ++ +++ + +P++I V T
Sbjct: 183 LFSATFSTEIRELAKGLVNNPVEISVSPANST 214
>TIGR_CMR|SO_3388 [details] [associations]
symbol:SO_3388 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
RefSeq:NP_718942.1 ProteinModelPortal:Q8EBV7 GeneID:1171066
KEGG:son:SO_3388 PATRIC:23526456 OMA:SHLVRSK ProtClustDB:CLSK907144
Uniprot:Q8EBV7
Length = 409
Score = 339 (124.4 bits), Expect = 8.8e-31, P = 8.8e-31
Identities = 78/215 (36%), Positives = 114/215 (53%)
Query: 48 NFDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGNDVIAQAQSGTGKTATFSISILQ 107
+F + L+ +L+ + G+++P+ IQ AI + DV+A AQ+GTGKTA F++ ILQ
Sbjct: 2 SFSALSLNTQLVDTLAELGYQQPTPIQVEAIPAILTKQDVMAGAQTGTGKTAAFALPILQ 61
Query: 108 ------QVDQNIKECQALILAPTRELAQQIQKVVIALGDFMSVSCHACIGGTIVRDDIRK 161
Q D K +AL+L PTRELA Q+Q+ + + GG +
Sbjct: 62 LLMADNQSDHAAKAIRALVLVPTRELALQVQQSFVKYAKGTDIRVGIAYGGVSIEAQQAV 121
Query: 162 LEAGAQVVVGTPGRVFDMISRGALSTKQIRMFVLDEADEMLSRGFKDQIYDVFKHLNNDV 221
AG V++ TPGR+ D + +GAL+ Q+ V DEAD ML GF D+I V K +
Sbjct: 122 FNAGIDVLIATPGRLLDHLRQGALNLNQLNTLVFDEADRMLDMGFMDEIQAVLKQVPAQR 181
Query: 222 QVILLSATMPADVLDVSMKFMRDPIKILVKKEELT 256
Q +L SAT+ + S +RDP +I V K T
Sbjct: 182 QTLLFSATLDDSIFSFSKNLLRDPKRIEVAKPNTT 216
>TIGR_CMR|VC_A0204 [details] [associations]
symbol:VC_A0204 "ATP-dependent RNA helicase RhlE"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE003853 GenomeReviews:AE003853_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 KO:K11927 PIR:E82488
RefSeq:NP_232603.1 ProteinModelPortal:Q9KMW4 DNASU:2612352
GeneID:2612352 KEGG:vch:VCA0204 PATRIC:20084977 OMA:AISFCDA
ProtClustDB:CLSK869561 Uniprot:Q9KMW4
Length = 451
Score = 339 (124.4 bits), Expect = 8.8e-31, P = 8.8e-31
Identities = 77/212 (36%), Positives = 121/212 (57%)
Query: 49 FDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGNDVIAQAQSGTGKTATFSISILQQ 108
F + LS +L+ I G+ PS IQ +AI + G DV+A AQ+GTGKTA F++ IL+
Sbjct: 3 FTSLGLSAPILKAIEEKGYNTPSPIQLQAIPAVLAGKDVMAAAQTGTGKTAGFTLPILEL 62
Query: 109 VDQNIK----ECQALILAPTRELAQQIQKVVIALGDFMSVSCHACIGGTIVRDDIRKLEA 164
+ + K + +ALIL PTRELA QIQ V+ G + + GG + ++++
Sbjct: 63 LAKGPKVRANQVRALILTPTRELAAQIQDNVMLYGRHLPLKSAVVFGGVKINPQMQRMCK 122
Query: 165 GAQVVVGTPGRVFDMISRGALSTKQIRMFVLDEADEMLSRGFKDQIYDVFKHLNNDVQVI 224
GA ++V TPGR+ D+ ++ A+ Q+ + VLDEAD ML GF I+ + K L Q +
Sbjct: 123 GADILVATPGRLMDLYNQNAVKFDQLEILVLDEADRMLDMGFIRDIHKILKLLPEKRQNL 182
Query: 225 LLSATMPADVLDVSMKFMRDPIKILVKKEELT 256
L SAT ++ +++ + +P++I V T
Sbjct: 183 LFSATFSTEIRELAKGLVNNPVEISVSPANST 214
>TIGR_CMR|DET_0183 [details] [associations]
symbol:DET_0183 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:243164 "Dehalococcoides ethenogenes 195"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0008152 "metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000027 GenomeReviews:CP000027_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 RefSeq:YP_180931.1 ProteinModelPortal:Q3ZA18
STRING:Q3ZA18 GeneID:3230538 KEGG:det:DET0183 PATRIC:21607443
OMA:NFAPAVM ProtClustDB:CLSK837629
BioCyc:DETH243164:GJNF-183-MONOMER Uniprot:Q3ZA18
Length = 560
Score = 343 (125.8 bits), Expect = 9.5e-31, P = 9.5e-31
Identities = 72/204 (35%), Positives = 119/204 (58%)
Query: 48 NFDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGNDVIAQAQSGTGKTATFSISILQ 107
+F+ + ++ G+ A G+++P+ IQ +AI P + G+DVI AQ+GTGKTA +++ ++Q
Sbjct: 2 SFESFNFAPAVMAGVRACGYQEPTPIQAQAIPPILEGHDVIGLAQTGTGKTAAYALPVIQ 61
Query: 108 QVDQNIK-ECQALILAPTRELAQQIQKVVIALGDFMSVSCHACIGGTIVRDDIRKLEAGA 166
++ + + L+LAPTRELA QI + +LG + + GG + IR+L +G
Sbjct: 62 KMLSTPRGRVRTLVLAPTRELACQIAESFRSLGQRARIRECSIYGGVNMDQQIRRLRSGV 121
Query: 167 QVVVGTPGRVFDMISRGALSTKQIRMFVLDEADEMLSRGFKDQIYDVFKHLNNDVQVILL 226
VVV PGR+ D I RG + + ++DEAD M GF+ I + K L Q +L
Sbjct: 122 DVVVACPGRLLDHIWRGTIDICGVETLIIDEADRMFDMGFQPDIQSILKCLVQPHQTLLF 181
Query: 227 SATMPADVLDVSMKFMRDPIKILV 250
SATMP +V ++++ +P+ I +
Sbjct: 182 SATMPPEVRKLTLETQTNPVTIQI 205
>UNIPROTKB|Q9NUU7 [details] [associations]
symbol:DDX19A "ATP-dependent RNA helicase DDX19A"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0051028 "mRNA transport" evidence=IEA]
[GO:0006917 "induction of apoptosis" evidence=IEA] [GO:0010043
"response to zinc ion" evidence=IEA] [GO:0005643 "nuclear pore"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0031965
"nuclear membrane" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005737 GO:GO:0015031
GO:GO:0031965 GO:GO:0005643 GO:GO:0003723 GO:GO:0051028
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 KO:K01529
GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 OMA:PQAICLA CTD:55308
HOVERGEN:HBG107989 OrthoDB:EOG46MBJK EMBL:AK001988 EMBL:AK223262
EMBL:AL832970 EMBL:CH471241 EMBL:BC005162 EMBL:BC006544
EMBL:BC137496 EMBL:BC137497 IPI:IPI00019918 RefSeq:NP_060802.1
UniGene:Hs.656037 ProteinModelPortal:Q9NUU7 SMR:Q9NUU7
IntAct:Q9NUU7 MINT:MINT-1450935 STRING:Q9NUU7 PhosphoSite:Q9NUU7
DMDM:73919226 PaxDb:Q9NUU7 PeptideAtlas:Q9NUU7 PRIDE:Q9NUU7
DNASU:55308 Ensembl:ENST00000302243 GeneID:55308 KEGG:hsa:55308
UCSC:uc002eyv.3 GeneCards:GC16P070380 H-InvDB:HIX0038837
HGNC:HGNC:25628 HPA:HPA045252 neXtProt:NX_Q9NUU7
PharmGKB:PA134894996 InParanoid:Q9NUU7 PhylomeDB:Q9NUU7
GenomeRNAi:55308 NextBio:59538 ArrayExpress:Q9NUU7 Bgee:Q9NUU7
CleanEx:HS_DDX19A Genevestigator:Q9NUU7 GermOnline:ENSG00000168872
Uniprot:Q9NUU7
Length = 478
Score = 338 (124.0 bits), Expect = 1.1e-30, P = 1.1e-30
Identities = 84/219 (38%), Positives = 134/219 (61%)
Query: 47 ENFDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGN---DVIAQAQSGTGKTATFSI 103
++F+++ L +LL+G+YA GF +PS IQ+ A+ P + ++IAQ+QSGTGKTA F +
Sbjct: 91 KSFEELRLKPQLLQGVYAMGFNRPSKIQENAL-PMMLAEPPQNLIAQSQSGTGKTAAFVL 149
Query: 104 SILQQVDQNIKECQALILAPTRELAQQIQKVVIALGDFMSVS--CHACIGGTIVRDDIRK 161
++L +V+ + + Q L L+PT ELA Q KV+ +G F +A G + R +K
Sbjct: 150 AMLSRVEPSDRYPQCLCLSPTYELALQTGKVIEQMGKFYPELKLAYAVRGNKLERG--QK 207
Query: 162 LEAGAQVVVGTPGRVFDMISR-GALSTKQIRMFVLDEADEMLS-RGFKDQIYDVFKHLNN 219
+ Q+V+GTPG V D S+ + K+I++FVLDEAD M++ +G +DQ + + L
Sbjct: 208 ISE--QIVIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPR 265
Query: 220 DVQVILLSATMPADVLDVSMKFMRDPIKILVKKEELTLE 258
+ Q++L SAT V + K + DP I +K+EE TL+
Sbjct: 266 NCQMLLFSATFEDSVWKFAQKVVPDPNVIKLKREEETLD 304
>TAIR|locus:2148027 [details] [associations]
symbol:UAP56b "homolog of human UAP56 b" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0005618
"cell wall" evidence=IDA] [GO:0005829 "cytosol" evidence=RCA]
[GO:0009506 "plasmodesma" evidence=IDA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0009506 GO:GO:0005524 EMBL:CP002688
GO:GO:0005618 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
UniGene:At.49007 UniGene:At.73904 GeneID:830990 KEGG:ath:AT5G11200
OMA:LECVINY IPI:IPI00938969 RefSeq:NP_001154706.1
ProteinModelPortal:F4JWF6 SMR:F4JWF6 PRIDE:F4JWF6
EnsemblPlants:AT5G11200.2 Uniprot:F4JWF6
Length = 486
Score = 337 (123.7 bits), Expect = 1.4e-30, P = 1.4e-30
Identities = 80/203 (39%), Positives = 112/203 (55%)
Query: 46 AENFDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGNDVIAQAQSGTGKTATFSISI 105
+ F D L ELLR I GFE PS +Q I + G DVI QA+SG GKTA F +S
Sbjct: 45 SSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLST 104
Query: 106 LQQVDQNIKECQALILAPTRELAQQIQKVVIALGDFM-SVSCHACIGGTIVR--DDIRKL 162
LQQ++ + + AL+L TRELA QI + ++ GG ++ D+ K
Sbjct: 105 LQQIEPSPGQVSALVLCHTRELAYQICNEFVRFSTYLPDTKVSVFYGGVNIKIHKDLLKN 164
Query: 163 EAGAQVVVGTPGRVFDMISRGALSTKQIRMFVLDEADEML-SRGFKDQIYDVFKHLNNDV 221
E +VVGTPGRV + LS K +R F+LDE D+ML S + + ++FK +D
Sbjct: 165 EC-PHIVVGTPGRVLALAREKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDK 223
Query: 222 QVILLSATMPADVLDVSMKFMRD 244
QV++ SAT+ ++ V KFM+D
Sbjct: 224 QVMMFSATLSKEIRPVCKKFMQD 246
>TAIR|locus:2087852 [details] [associations]
symbol:PMH2 "putative mitochondrial RNA helicase 2"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA;ISS] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005618
"cell wall" evidence=IDA] [GO:0000373 "Group II intron splicing"
evidence=IMP] [GO:0009409 "response to cold" evidence=IEP]
[GO:0043234 "protein complex" evidence=IDA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005739 GO:GO:0005524
GO:GO:0005618 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0043234
GO:GO:0005730 GO:GO:0009409 GO:GO:0003723 EMBL:AB022215
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0000373 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
EMBL:AY062502 EMBL:AY093256 IPI:IPI00524382 RefSeq:NP_188872.2
UniGene:At.27322 ProteinModelPortal:Q9LUW5 SMR:Q9LUW5 STRING:Q9LUW5
PaxDb:Q9LUW5 PRIDE:Q9LUW5 EnsemblPlants:AT3G22330.1 GeneID:821802
KEGG:ath:AT3G22330 GeneFarm:1033 TAIR:At3g22330
HOGENOM:HOG000268800 InParanoid:Q9LUW5 OMA:HGRGRNP PhylomeDB:Q9LUW5
ProtClustDB:CLSN2684125 Genevestigator:Q9LUW5 GermOnline:AT3G22330
Uniprot:Q9LUW5
Length = 616
Score = 343 (125.8 bits), Expect = 1.5e-30, P = 1.5e-30
Identities = 72/204 (35%), Positives = 123/204 (60%)
Query: 51 DMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGNDVIAQAQSGTGKTATFSISILQQVD 110
++ +S E+++ + + G EK IQ+ + P + G D+I +A++GTGKT F I I+ ++
Sbjct: 108 ELGISPEIVKALSSKGIEKLFPIQKAVLEPAMEGRDMIGRARTGTGKTLAFGIPIIDKII 167
Query: 111 Q-NIKECQA-----LILAPTRELAQQIQKVVIALGDFMSVSCHACIGGTIVRDDIRKLEA 164
+ N K + L+LAPTRELA+Q++K + C GGT + +R+L+
Sbjct: 168 KYNAKHGRGRNPLCLVLAPTRELARQVEKEFRESAPSLDTIC--LYGGTPIGQQMRQLDY 225
Query: 165 GAQVVVGTPGRVFDMISRGALSTKQIRMFVLDEADEMLSRGFKDQIYDVFKHLNNDVQVI 224
G V VGTPGRV D++ RGAL+ +++ VLDEAD+ML GF + + + + L Q +
Sbjct: 226 GVDVAVGTPGRVIDLMKRGALNLSEVQFVVLDEADQMLQVGFAEDVEIILEKLPEKRQSM 285
Query: 225 LLSATMPADVLDVSMKFMRDPIKI 248
+ SATMP+ + ++ K++ +P+ +
Sbjct: 286 MFSATMPSWIRSLTKKYLNNPLTV 309
>UNIPROTKB|Q9KLH6 [details] [associations]
symbol:VC_A0768 "ATP-dependent RNA helicase, DEAD box
family" species:243277 "Vibrio cholerae O1 biovar El Tor str.
N16961" [GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0008152 "metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE003853 GenomeReviews:AE003853_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 KO:K11927
OMA:LECVINY PIR:H82418 RefSeq:NP_233154.1 ProteinModelPortal:Q9KLH6
DNASU:2612338 GeneID:2612338 KEGG:vch:VCA0768 PATRIC:20086092
ProtClustDB:CLSK869757 Uniprot:Q9KLH6
Length = 422
Score = 336 (123.3 bits), Expect = 1.8e-30, P = 1.8e-30
Identities = 78/217 (35%), Positives = 118/217 (54%)
Query: 49 FDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGNDVIAQAQSGTGKTATFSISILQQ 108
F + L LL + G P+ IQQ+AI ++G DV+A AQ+GTGKTA F + ++Q+
Sbjct: 8 FSQLGLDSRLLNTLSELGIANPTPIQQQAIPHVLQGKDVLAGAQTGTGKTAAFGLPLIQR 67
Query: 109 -VDQ------NIKECQALILAPTRELAQQIQKVVIALGDFMSVSCHACIGGTIVRDDIRK 161
++Q N KE +AL+L PTRELAQQ+ + A + A GGT ++ +
Sbjct: 68 FIEQPWQREANSKEIRALVLVPTRELAQQVLDSLQAYAKGTELKIVAVYGGTSMKVQLNH 127
Query: 162 LEAGAQVVVGTPGRVFDMISRGALSTKQIRMFVLDEADEMLSRGFKDQIYDVFKHLNNDV 221
L G +++ TPGR+ D +L ++ + VLDEAD ML GF + V + L+
Sbjct: 128 LRGGVDILIATPGRLLDHAHVKSLFLGKVEVLVLDEADRMLDMGFMPDLQRVLRRLSPLR 187
Query: 222 QVILLSATMPADVLDVSMKFMRDPIKILVKKEELTLE 258
Q + SAT + + V+ + MRDPI++ V T E
Sbjct: 188 QTLFFSATFDSKIKAVAYRIMRDPIEVQVTPSNSTAE 224
>TIGR_CMR|VC_A0768 [details] [associations]
symbol:VC_A0768 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE003853 GenomeReviews:AE003853_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 KO:K11927
OMA:LECVINY PIR:H82418 RefSeq:NP_233154.1 ProteinModelPortal:Q9KLH6
DNASU:2612338 GeneID:2612338 KEGG:vch:VCA0768 PATRIC:20086092
ProtClustDB:CLSK869757 Uniprot:Q9KLH6
Length = 422
Score = 336 (123.3 bits), Expect = 1.8e-30, P = 1.8e-30
Identities = 78/217 (35%), Positives = 118/217 (54%)
Query: 49 FDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGNDVIAQAQSGTGKTATFSISILQQ 108
F + L LL + G P+ IQQ+AI ++G DV+A AQ+GTGKTA F + ++Q+
Sbjct: 8 FSQLGLDSRLLNTLSELGIANPTPIQQQAIPHVLQGKDVLAGAQTGTGKTAAFGLPLIQR 67
Query: 109 -VDQ------NIKECQALILAPTRELAQQIQKVVIALGDFMSVSCHACIGGTIVRDDIRK 161
++Q N KE +AL+L PTRELAQQ+ + A + A GGT ++ +
Sbjct: 68 FIEQPWQREANSKEIRALVLVPTRELAQQVLDSLQAYAKGTELKIVAVYGGTSMKVQLNH 127
Query: 162 LEAGAQVVVGTPGRVFDMISRGALSTKQIRMFVLDEADEMLSRGFKDQIYDVFKHLNNDV 221
L G +++ TPGR+ D +L ++ + VLDEAD ML GF + V + L+
Sbjct: 128 LRGGVDILIATPGRLLDHAHVKSLFLGKVEVLVLDEADRMLDMGFMPDLQRVLRRLSPLR 187
Query: 222 QVILLSATMPADVLDVSMKFMRDPIKILVKKEELTLE 258
Q + SAT + + V+ + MRDPI++ V T E
Sbjct: 188 QTLFFSATFDSKIKAVAYRIMRDPIEVQVTPSNSTAE 224
>UNIPROTKB|F1MUT6 [details] [associations]
symbol:DDX19B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00530000063236 EMBL:DAAA02045970
IPI:IPI00704706 UniGene:Bt.37736 Ensembl:ENSBTAT00000004644
OMA:KMSMNIL Uniprot:F1MUT6
Length = 484
Score = 335 (123.0 bits), Expect = 2.3e-30, P = 2.3e-30
Identities = 84/219 (38%), Positives = 132/219 (60%)
Query: 47 ENFDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGN---DVIAQAQSGTGKTATFSI 103
++F+++ L +LL+G+YA GF +PS IQ+ A+ P + ++IAQ+QSGTGKTA F +
Sbjct: 97 KSFEELRLKPQLLQGVYAMGFNRPSKIQENAL-PLMLAEPPQNLIAQSQSGTGKTAAFVL 155
Query: 104 SILQQVDQNIKECQALILAPTRELAQQIQKVVIALGDFMSVS--CHACIGGTIVRDDIRK 161
++L QV+ + Q L L+PT ELA Q KV+ +G F +A G + R +K
Sbjct: 156 AMLSQVEPANRHPQCLCLSPTYELALQTGKVIEQMGKFYPELKLAYAVRGNKLERG--QK 213
Query: 162 LEAGAQVVVGTPGRVFDMISR-GALSTKQIRMFVLDEADEMLS-RGFKDQIYDVFKHLNN 219
+ +V+GTPG V D S+ + K+I++FVLDEAD M++ +G +DQ + + L
Sbjct: 214 ISE--HIVIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPR 271
Query: 220 DVQVILLSATMPADVLDVSMKFMRDPIKILVKKEELTLE 258
+ Q++L SAT V + K + DP I +K+EE TL+
Sbjct: 272 NCQMLLFSATFEDSVWKFAQKVVPDPNIIKLKREEETLD 310
>UNIPROTKB|F1S432 [details] [associations]
symbol:DDX19B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00530000063236 OMA:HETIFEV
EMBL:CU929739 Ensembl:ENSSSCT00000003016 Uniprot:F1S432
Length = 481
Score = 333 (122.3 bits), Expect = 3.8e-30, P = 3.8e-30
Identities = 84/219 (38%), Positives = 132/219 (60%)
Query: 47 ENFDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGN---DVIAQAQSGTGKTATFSI 103
++F+++ L +LL+G+YA GF +PS IQ+ A+ P + ++IAQ+QSGTGKTA F +
Sbjct: 94 KSFEELRLKPQLLQGVYAMGFNRPSKIQENAL-PLMLAEPPQNLIAQSQSGTGKTAAFVL 152
Query: 104 SILQQVDQNIKECQALILAPTRELAQQIQKVVIALGDFMSVS--CHACIGGTIVRDDIRK 161
++L QV+ + Q L L+PT ELA Q KV+ +G F +A G + R +K
Sbjct: 153 AMLSQVEPANRYPQCLCLSPTYELALQTGKVIEQMGKFYPELKLAYAVRGNKLERG--QK 210
Query: 162 LEAGAQVVVGTPGRVFDMISR-GALSTKQIRMFVLDEADEMLS-RGFKDQIYDVFKHLNN 219
+ +V+GTPG V D S+ + K+I++FVLDEAD M++ +G +DQ + + L
Sbjct: 211 ISE--HIVIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPR 268
Query: 220 DVQVILLSATMPADVLDVSMKFMRDPIKILVKKEELTLE 258
+ Q++L SAT V + K + DP I +K+EE TL+
Sbjct: 269 NCQMLLFSATFEDSVWKFAQKVVPDPNIIKLKREEETLD 307
>UNIPROTKB|F1S758 [details] [associations]
symbol:LOC100523329 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00530000063236 OMA:WHFAERI
EMBL:CU928873 Ensembl:ENSSSCT00000016589 Uniprot:F1S758
Length = 379
Score = 333 (122.3 bits), Expect = 3.8e-30, P = 3.8e-30
Identities = 90/210 (42%), Positives = 127/210 (60%)
Query: 56 EELLRGIYAYGFEKPSAIQQRAIIPCVRGN---DVIAQAQSGTGKTATFSISILQQVDQN 112
EELL+GIYA GF +PS IQ+ A+ P + + ++IAQ+QSGTGKTA F +++L +V+
Sbjct: 2 EELLKGIYAMGFNRPSKIQEMAL-PMMLAHPPQNLIAQSQSGTGKTAAFVLAMLSRVNAL 60
Query: 113 IKECQALILAPTRELAQQIQKVVIALGDF-MSVSC-HACIGGTIVRD-DIRKLEAGAQVV 169
Q L LAPT ELA Q +VV +G F + V +A G I R DI K Q++
Sbjct: 61 ELFPQCLCLAPTYELALQTGRVVERMGRFCVDVQVMYAIRGNRIPRGTDITK-----QII 115
Query: 170 VGTPGRVFDM-ISRGALSTKQIRMFVLDEADEML-SRGFKDQIYDVFKHLNNDVQVILLS 227
+GTPG V D R + +IR+FVLDEAD M+ ++GF DQ + + L + Q++L S
Sbjct: 116 IGTPGTVLDWCFKRKLIDLTKIRVFVLDEADVMIDTQGFSDQSIRIQRALPSGCQMLLFS 175
Query: 228 ATMPADVLDVSMKFMRDPIKILVKKEELTL 257
AT V + + + DP I ++KEELTL
Sbjct: 176 ATFEDSVWQFAERIIPDPNVIKLRKEELTL 205
>MGI|MGI:99526 [details] [associations]
symbol:Ddx19a "DEAD (Asp-Glu-Ala-Asp) box polypeptide 19a"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005643 "nuclear pore"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0006917 "induction of apoptosis"
evidence=ISO] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0051028 "mRNA transport" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:99526
GO:GO:0005524 GO:GO:0005737 GO:GO:0015031 GO:GO:0031965
GO:GO:0005643 GO:GO:0003723 EMBL:CH466525 GO:GO:0051028
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 OMA:PQAICLA GeneTree:ENSGT00530000063236 CTD:55308
HOVERGEN:HBG107989 OrthoDB:EOG46MBJK EMBL:L25125 EMBL:AK049467
EMBL:AK146548 EMBL:BC011270 IPI:IPI00123651 PIR:I49731
RefSeq:NP_031942.2 UniGene:Mm.287901 ProteinModelPortal:Q61655
SMR:Q61655 IntAct:Q61655 PhosphoSite:Q61655
REPRODUCTION-2DPAGE:Q61655 PaxDb:Q61655 PRIDE:Q61655
Ensembl:ENSMUST00000040416 GeneID:13680 KEGG:mmu:13680
InParanoid:Q543M2 ChiTaRS:DDX19A NextBio:284434 Bgee:Q61655
CleanEx:MM_DDX19A Genevestigator:Q61655
GermOnline:ENSMUSG00000015023 Uniprot:Q61655
Length = 478
Score = 333 (122.3 bits), Expect = 3.8e-30, P = 3.8e-30
Identities = 83/219 (37%), Positives = 131/219 (59%)
Query: 47 ENFDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGN---DVIAQAQSGTGKTATFSI 103
++F+++ L +LL+G+YA GF +PS IQ+ A+ P + ++IAQ+QSGTGKTA F +
Sbjct: 91 KSFEELRLKPQLLQGVYAMGFNRPSKIQENAL-PMMLAEPPQNLIAQSQSGTGKTAAFVL 149
Query: 104 SILQQVDQNIKECQALILAPTRELAQQIQKVVIALGDFMSVS--CHACIGGTIVRDDIRK 161
++L +V+ + Q L L+PT ELA Q KV+ +G F +A G + R
Sbjct: 150 AMLSRVEPADRYPQCLCLSPTYELALQTGKVIEQMGKFHPELKLAYAVRGNKLERGQ--- 206
Query: 162 LEAGAQVVVGTPGRVFDMISR-GALSTKQIRMFVLDEADEMLS-RGFKDQIYDVFKHLNN 219
+ Q+V+GTPG V D S+ + K+I++FVLDEAD M++ +G +DQ + + L
Sbjct: 207 -KVSEQIVIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPR 265
Query: 220 DVQVILLSATMPADVLDVSMKFMRDPIKILVKKEELTLE 258
+ Q++L SAT V + K + DP I +K+EE TL+
Sbjct: 266 NCQMLLFSATFEDSVWKFAQKVVPDPNIIKLKREEETLD 304
>POMBASE|SPAC30D11.03 [details] [associations]
symbol:ddx27 "ATP-dependent RNA helicase Ddx27/Drs1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=ISM]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=ISO;IDA] [GO:0006364 "rRNA processing" evidence=ISO]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 PomBase:SPAC30D11.03 GO:GO:0005524 EMBL:CU329670
GO:GO:0005730 GenomeReviews:CU329670_GR GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000265456 KO:K13181 OrthoDB:EOG4B01XM PIR:S62561
RefSeq:NP_593214.1 ProteinModelPortal:Q09903 STRING:Q09903
EnsemblFungi:SPAC30D11.03.1 GeneID:2543155 KEGG:spo:SPAC30D11.03
NextBio:20804181 Uniprot:Q09903
Length = 754
Score = 320 (117.7 bits), Expect = 4.8e-30, Sum P(2) = 4.8e-30
Identities = 70/213 (32%), Positives = 114/213 (53%)
Query: 48 NFDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGNDVIAQAQSGTGKTATFSISILQ 107
+F M LS +L+G+ GFE P+ IQ + I + G D++ A +G+GKTA F + IL+
Sbjct: 260 SFQSMNLSRPILKGLSNLGFEVPTQIQDKTIPLALLGKDIVGAAVTGSGKTAAFIVPILE 319
Query: 108 QV---DQNIKECQALILAPTRELAQQIQKVVIALGDFMSVSCHACIGGTIVRDDIRKLEA 164
++ + + + LIL PTRELA Q V + F + CIGG ++ ++L
Sbjct: 320 RLLYRPKKVPTTRVLILCPTRELAMQCHSVATKIASFTDIMVCLCIGGLSLKLQEQELRK 379
Query: 165 GAQVVVGTPGRVFD-MISRGALSTKQIRMFVLDEADEMLSRGFKDQIYDVFKHLNNDVQV 223
+V+ TPGR D M + + + I + V+DEAD ML GF D++ ++ + Q
Sbjct: 380 RPDIVIATPGRFIDHMRNSQGFTVENIEIMVMDEADRMLEDGFADELNEIIQACPKSRQT 439
Query: 224 ILLSATMPADVLDVSMKFMRDPIKILVKKEELT 256
+L SATM V D+ + P+++ V ++ T
Sbjct: 440 MLFSATMTDKVDDLIRLSLNRPVRVFVDNKKTT 472
Score = 46 (21.3 bits), Expect = 4.8e-30, Sum P(2) = 4.8e-30
Identities = 15/57 (26%), Positives = 26/57 (45%)
Query: 4 QRGDNWEDPKNGPAENEAEQPAYNG----PPGMAVDGLIETNWDHVAENFDDMELSE 56
++ D+ E P + P+E E ++P +A+DG +AEN D+ E
Sbjct: 142 RKPDDDEFPSSFPSEEELQEPEQENIDSDDEDLAIDGF---GAGAIAENEDESSQDE 195
Score = 44 (20.5 bits), Expect = 7.7e-30, Sum P(2) = 7.7e-30
Identities = 16/67 (23%), Positives = 28/67 (41%)
Query: 7 DNWEDPKNGPAENEAEQPAYNGPPGMAVDGLIETNWDHVAENFDDMELSEELLR--GIYA 64
+N ++ +E+E E P A + N D A + D E EE+ + +A
Sbjct: 186 ENEDESSQDESESEEEDDITEPVPSFANISTQDFNSDSAAGSSDSEEDEEEIAKKNAFFA 245
Query: 65 YGFEKPS 71
G ++ S
Sbjct: 246 EGDKEKS 252
>UNIPROTKB|Q0C354 [details] [associations]
symbol:rhlE "ATP-dependent RNA helicase RhlE"
species:228405 "Hyphomonas neptunium ATCC 15444" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:CP000158
GenomeReviews:CP000158_GR GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927
RefSeq:YP_759839.1 ProteinModelPortal:Q0C354 STRING:Q0C354
GeneID:4290097 KEGG:hne:HNE_1118 PATRIC:32215041 OMA:KHGSEKL
BioCyc:HNEP228405:GI69-1155-MONOMER Uniprot:Q0C354
Length = 464
Score = 332 (121.9 bits), Expect = 4.9e-30, P = 4.9e-30
Identities = 71/211 (33%), Positives = 122/211 (57%)
Query: 45 VAENFDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGNDVIAQAQSGTGKTATFSIS 104
+ +F + L+ +L + G+ P+ IQ++AI ++G D++ AQ+GTGKT F+
Sbjct: 5 IMSDFQSLGLTGRILTSLTKAGYTAPTPIQEQAIPLVIQGRDIVGLAQTGTGKTLAFAAP 64
Query: 105 ILQQVDQN-----IKECQALILAPTRELAQQIQKVVIALGDFMSVSCHACIGGTIVRDDI 159
IL ++ +N ++ + L+LAPTRELA QI G +++ GG + I
Sbjct: 65 ILDRLSRNASPAPVRGTRVLVLAPTRELAGQIATSFGTYGAGLNLRVVMVCGGAKIGGQI 124
Query: 160 RKLEAGAQVVVGTPGRVFDMISRGALSTKQIRMFVLDEADEMLSRGFKDQIYDVFKHLNN 219
R+LE GA ++V TPGR+ D++ + A+S ++ +LDEAD+ML GF + + K++ +
Sbjct: 125 RQLERGAHILVATPGRLIDLMEQRAVSLDKVETLILDEADQMLDLGFIHALRAIAKNVPS 184
Query: 220 DVQVILLSATMPADVLDVSMKFMRDPIKILV 250
Q + SATMP V ++ F+R+P ++ V
Sbjct: 185 KRQTLFFSATMPKAVESLAATFLRNPAEVSV 215
>TIGR_CMR|GSU_0522 [details] [associations]
symbol:GSU_0522 "ATP-dependent RNA helicase RhlB"
species:243231 "Geobacter sulfurreducens PCA" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0006401
"RNA catabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE017180 GenomeReviews:AE017180_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K03732
RefSeq:NP_951580.1 ProteinModelPortal:Q74FT4 GeneID:2685920
KEGG:gsu:GSU0522 PATRIC:22023799 OMA:LAYEFMN ProtClustDB:CLSK827899
BioCyc:GSUL243231:GH27-482-MONOMER Uniprot:Q74FT4
Length = 443
Score = 332 (121.9 bits), Expect = 4.9e-30, P = 4.9e-30
Identities = 79/217 (36%), Positives = 122/217 (56%)
Query: 49 FDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGNDVIAQAQSGTGKTATFSISILQQ 108
F D+ L E++++G+ GF + IQ++ + + G DV QAQ+GTGKTA F IS+ +
Sbjct: 3 FADLNLPEQVMQGVADAGFSDCTPIQEKTLPLSLGGKDVAGQAQTGTGKTAAFLISLFTK 62
Query: 109 VDQN-----IKECQALILAPTRELAQQIQKVVIALGDFMSVSCHACIGGTIVRDDIRKLE 163
+ ++ + +A+ILAPTREL QI+K LG + A GG L+
Sbjct: 63 LLRSGRGGERRHPRAIILAPTRELVVQIEKDAQVLGAHCGFTIQAIYGGVDYMKQKNALK 122
Query: 164 AGAQVVVGTPGRVFDMISRGALSTKQIRMFVLDEADEMLSRGFKDQIYDVFKHLN--NDV 221
GA VVVGTPGR+ D + + S K+I M V+DEAD M GF + + + L +
Sbjct: 123 EGADVVVGTPGRLIDYLKQKVYSLKEIEMLVIDEADRMFDMGFIADLRFILRRLPPYDKR 182
Query: 222 QVILLSATMPADVLDVSMKFMRDPIKILVKKEELTLE 258
Q ++ SAT+ V++++ +FM P K+ V E++T E
Sbjct: 183 QNLMFSATLNQRVMELAYEFMNVPEKVAVTPEQMTAE 219
>ZFIN|ZDB-GENE-031001-8 [details] [associations]
symbol:ddx27 "DEAD (Asp-Glu-Ala-Asp) box polypeptide
27" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-031001-8 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 CTD:55661 HOGENOM:HOG000265456
HOVERGEN:HBG106162 KO:K13181 EMBL:AY648729 IPI:IPI00501087
RefSeq:NP_001002869.1 UniGene:Dr.76523 ProteinModelPortal:Q6DRN0
PRIDE:Q6DRN0 GeneID:378844 KEGG:dre:378844 InParanoid:Q6DRN0
NextBio:20813841 ArrayExpress:Q6DRN0 Bgee:Q6DRN0 Uniprot:Q6DRN0
Length = 776
Score = 330 (121.2 bits), Expect = 5.0e-30, Sum P(2) = 5.0e-30
Identities = 74/207 (35%), Positives = 118/207 (57%)
Query: 49 FDDMELSEELLRGIYAYGFEKPSAIQQRAIIPC-VRGNDVIAQAQSGTGKTATFSISILQ 107
F DM LS LL+ I GF++P+ IQ +A +P + G D+ A A +GTGKTA F + +L+
Sbjct: 203 FHDMNLSRPLLKAISTMGFKQPTPIQ-KACVPVGLLGKDICACAATGTGKTAAFMLPVLE 261
Query: 108 QVDQNIKECQA---LILAPTRELAQQIQKVVIALGDFMSVSCHACIGGTIVRDDIRKLEA 164
++ +E Q L+L PTREL Q+ V L F ++S +GG ++ L A
Sbjct: 262 RLIYKPRETQVTRVLVLVPTRELGIQVHTVARQLAQFTTISTCLAVGGLDLKSQEAALRA 321
Query: 165 GAQVVVGTPGRVFDMI-SRGALSTKQIRMFVLDEADEMLSRGFKDQIYDVFKHLNNDVQV 223
G V++ TPGR+ D + + + QI + +LDEAD ML F++Q+ ++ + Q
Sbjct: 322 GPDVLIATPGRLIDHLHNTPSFELSQIEILILDEADRMLDEYFEEQMKEIIRMCAYQRQT 381
Query: 224 ILLSATMPADVLDVSMKFMRDPIKILV 250
+L SATM +V D++ ++ P++I V
Sbjct: 382 MLFSATMSEEVKDLASVSLKQPVRIFV 408
Score = 36 (17.7 bits), Expect = 5.0e-30, Sum P(2) = 5.0e-30
Identities = 7/26 (26%), Positives = 14/26 (53%)
Query: 3 EQRGDNWEDPKNGPAENEAEQPAYNG 28
E+ D E+ N +N+A++ + G
Sbjct: 123 EEEDDEEEEEDNDADDNDADEVSGGG 148
>UNIPROTKB|F1NQV5 [details] [associations]
symbol:DDX27 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00550000074997 EMBL:AADN02019007 IPI:IPI00579774
Ensembl:ENSGALT00000039062 ArrayExpress:F1NQV5 Uniprot:F1NQV5
Length = 758
Score = 322 (118.4 bits), Expect = 6.1e-30, Sum P(2) = 6.1e-30
Identities = 72/208 (34%), Positives = 119/208 (57%)
Query: 48 NFDDMELSEELLRGIYAYGFEKPSAIQQRAIIPC-VRGNDVIAQAQSGTGKTATFSISIL 106
+F DM LS LL+ I A GF++P+ IQ +A IP + G D+ A A +GTGKTA F + +L
Sbjct: 181 SFQDMNLSRPLLKAITALGFKQPTPIQ-KACIPVGLLGKDICACAATGTGKTAAFILPVL 239
Query: 107 QQVDQNIKEC---QALILAPTRELAQQIQKVVIALGDFMSVSCHACIGGTIVRDDIRKLE 163
+++ ++ + L+L PTREL Q+ V L F SV+ +GG V+ L
Sbjct: 240 ERLIYKPRQAPITRVLVLVPTRELGIQVHSVTKQLAQFSSVTTCLAVGGLDVKTQEAALR 299
Query: 164 AGAQVVVGTPGRVFDMISR-GALSTKQIRMFVLDEADEMLSRGFKDQIYDVFKHLNNDVQ 222
+G +++ TPGR+ D + + + + +LDEAD ML F++Q+ ++ + + Q
Sbjct: 300 SGPDILIATPGRLIDHLHNCPSFHLSSVEVLILDEADRMLDEYFEEQMKEIIRLCSRHRQ 359
Query: 223 VILLSATMPADVLDVSMKFMRDPIKILV 250
+L SATM +V D++ +++P +I V
Sbjct: 360 TMLFSATMTEEVKDLASVSLKNPTRIFV 387
Score = 43 (20.2 bits), Expect = 6.1e-30, Sum P(2) = 6.1e-30
Identities = 12/26 (46%), Positives = 18/26 (69%)
Query: 6 GDNW-EDPKNGPAENEAE-QPAYNGP 29
GD E+P++G +E+E E +PA GP
Sbjct: 14 GDEGPEEPESGDSEDEEEVRPA-PGP 38
>FB|FBgn0024804 [details] [associations]
symbol:Dbp80 "Dead box protein 80" species:7227 "Drosophila
melanogaster" [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=NAS] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0044614 "nuclear pore
cytoplasmic filaments" evidence=ISS] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0015031 GO:GO:0031965 GO:GO:0005643 GO:GO:0003723
GO:GO:0051028 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
EMBL:AF005239 ProteinModelPortal:O61305 SMR:O61305 PaxDb:O61305
PRIDE:O61305 FlyBase:FBgn0024804 InParanoid:O61305
OrthoDB:EOG4BCC38 Bgee:O61305 GermOnline:CG17023 Uniprot:O61305
Length = 460
Score = 331 (121.6 bits), Expect = 6.2e-30, P = 6.2e-30
Identities = 83/221 (37%), Positives = 127/221 (57%)
Query: 44 HVAENFDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGN---DVIAQAQSGTGKTAT 100
H + F+ + L LL+GIYA GF PS IQ+ A+ P + + ++IAQ+QSGTGKTA
Sbjct: 70 HSVKTFEALHLKASLLKGIYAMGFNTPSKIQETAL-PTLLADPPQNMIAQSQSGTGKTAA 128
Query: 101 FSISILQQVDQNIKECQALILAPTRELAQQIQKVVIALGDFM-SVSCHACIGGTIVRDDI 159
F +++L +V+ + Q L L+PT ELA Q +V +G F + + G V D
Sbjct: 129 FVLAMLSRVNVCLNHPQVLCLSPTYELAIQTGEVAARMGQFCREIKLRFAVRGEEV-DRS 187
Query: 160 RKLEAGAQVVVGTPGRVFDM-ISRGALSTKQIRMFVLDEADEMLS-RGFKDQIYDVFKHL 217
+K+E +++GTPG++ D I K+I +FVLDEAD M++ +G DQ + K L
Sbjct: 188 KKIEE--HILIGTPGKLLDWGIKFRLFDMKKISVFVLDEADVMIATQGHHDQCIRIHKML 245
Query: 218 NNDVQVILLSATMPADVLDVSMKFMRDPIKILVKKEELTLE 258
N Q++ SAT +V+D + + DP I + +EE +LE
Sbjct: 246 NPHCQMLFFSATYGKEVMDFARLIVADPTIIRLMREEESLE 286
>UNIPROTKB|F1P5C0 [details] [associations]
symbol:DDX20 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006917
"induction of apoptosis" evidence=IEA] [GO:0017053 "transcriptional
repressor complex" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0017053 GO:GO:0006917 GO:GO:0003676
GO:GO:0000122 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 OMA:VEDYEHY
GeneTree:ENSGT00530000062880 EMBL:AADN02044991 IPI:IPI00582962
Ensembl:ENSGALT00000040229 Uniprot:F1P5C0
Length = 753
Score = 339 (124.4 bits), Expect = 7.7e-30, P = 7.7e-30
Identities = 82/203 (40%), Positives = 121/203 (59%)
Query: 48 NFDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVR-GNDVIAQAQSGTGKTATFSISIL 106
+F + LS +L G+ A GF +PS +Q +AI P R G D+I QA+SGTGKT FS L
Sbjct: 6 DFGSLLLSPPVLAGLEAAGFHRPSPVQLKAI-PLGRCGLDLIVQAKSGTGKTCVFSTIAL 64
Query: 107 QQVDQNIKECQALILAPTRELAQQIQKVVIALGDFMS-VSCHACIGGTIVRDDIRKLEAG 165
+ + Q LILAPTRE+A QI V+ +G M + CH IGGT + D +L+
Sbjct: 65 DALLLDSPATQVLILAPTREIAVQIHAVITTIGIKMEGLECHVFIGGTPLSQDKVRLKK- 123
Query: 166 AQVVVGTP--GRVFDMISRGALSTKQIRMFVLDEADEMLSRG-FKDQIYDVFKHLNNDVQ 222
+ VG+P GR+ +I L+T IR+F+LDEAD++L G F++QI ++ L + Q
Sbjct: 124 CHIAVGSPDVGRIKQLIELDYLNTASIRLFILDEADKLLEEGSFQEQINWIYSSLPANKQ 183
Query: 223 VILLSATMPADVLDVSMKFMRDP 245
++ +SAT P + + +MR+P
Sbjct: 184 MLAVSATYPESLANALTMYMREP 206
>UNIPROTKB|J3KS93 [details] [associations]
symbol:EIF4A1 "Eukaryotic initiation factor 4A-I"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR011545
Pfam:PF00270 GO:GO:0005524 GO:GO:0003676 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 EMBL:AC016876 HGNC:HGNC:3282
ChiTaRS:EIF4A1 Ensembl:ENST00000577929 Uniprot:J3KS93
Length = 85
Score = 329 (120.9 bits), Expect = 1.0e-29, P = 1.0e-29
Identities = 60/83 (72%), Positives = 75/83 (90%)
Query: 32 MAVDGLIETNWDHVAENFDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGNDVIAQA 91
M +G+IE+NW+ + ++FDDM LSE LLRGIYAYGFEKPSAIQQRAI+PC++G DVIAQA
Sbjct: 1 MEPEGVIESNWNEIVDSFDDMNLSESLLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQA 60
Query: 92 QSGTGKTATFSISILQQVDQNIK 114
QSGTGKTATF+ISILQQ++ ++K
Sbjct: 61 QSGTGKTATFAISILQQIELDLK 83
>WB|WBGene00001840 [details] [associations]
symbol:hel-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0008340
"determination of adult lifespan" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0009790 "embryo
development" evidence=IMP] [GO:0001703 "gastrulation with mouth
forming first" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0006915 "apoptotic process" evidence=IMP] [GO:0005634 "nucleus"
evidence=IDA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0008340 GO:GO:0009792 GO:GO:0040007
GO:GO:0040010 GO:GO:0006915 GO:GO:0002119 GO:GO:0008380
GO:GO:0006397 GO:GO:0010171 GO:GO:0005681 GO:GO:0003723
GO:GO:0040035 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095549 OMA:NAENPAI EMBL:Z54327 EMBL:U08102
PIR:T19484 RefSeq:NP_001021985.1 ProteinModelPortal:Q18212
SMR:Q18212 STRING:Q18212 PaxDb:Q18212 PRIDE:Q18212
EnsemblMetazoa:C26D10.2a.1 EnsemblMetazoa:C26D10.2a.2 GeneID:174333
KEGG:cel:CELE_C26D10.2 UCSC:C26D10.2a CTD:174333 WormBase:C26D10.2a
InParanoid:Q18212 NextBio:883586 ArrayExpress:Q18212 GO:GO:0001703
Uniprot:Q18212
Length = 425
Score = 329 (120.9 bits), Expect = 1.0e-29, P = 1.0e-29
Identities = 86/261 (32%), Positives = 134/261 (51%)
Query: 1 MAEQRGDNWEDPKNGPAENEAEQPAYNGPPGMAVDGLIETNWDHVAENFDDMELSEELLR 60
M E++ ++E+ + E + +QP G G + H + F D L E+LR
Sbjct: 1 MEEEQLLDYEEEQE---EIQDKQPEVGGGDARKTKGTYASI--H-SSGFRDFLLKPEILR 54
Query: 61 GIYAYGFEKPSAIQQRAIIPCVRGNDVIAQAQSGTGKTATFSISILQQVDQNIKECQALI 120
I GFE PS +Q I + G DV+ QA+SG GKTA F I+ LQQ++ E +
Sbjct: 55 AIGDCGFEHPSEVQHECIPQAILGMDVVCQAKSGMGKTAVFVITTLQQLEPVDGEVSVVC 114
Query: 121 LAPTRELAQQIQKVVIALGDFM-SVSCHACIGGTIVRDDIRKLEAGA-QVVVGTPGRVFD 178
+ TRELA QI K ++ V GG ++ D +L +VVGTPGR+
Sbjct: 115 MCHTRELAFQISKEYERFSKYLPGVKVAVFFGGMAIKKDEERLANDCPHIVVGTPGRMLA 174
Query: 179 MISRGALSTKQIRMFVLDEADEMLSRG-FKDQIYDVFKHLNNDVQVILLSATMPADVLDV 237
+ G L +++ FVLDE D+M+ + + ++ K QV++ SAT+P ++ V
Sbjct: 175 LARSGKLKLDKVKYFVLDECDKMIGDADMRRDVQEIVKMTPQQKQVMMFSATLPKELRTV 234
Query: 238 SMKFMRDPIKILVKKE-ELTL 257
+FM+DP+++ V E +LTL
Sbjct: 235 CKRFMQDPMEVYVDDEAKLTL 255
>ZFIN|ZDB-GENE-080721-12 [details] [associations]
symbol:zgc:193690 "zgc:193690" species:7955 "Danio
rerio" [GO:0004386 "helicase activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-080721-12 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00530000063236
EMBL:CR846089 IPI:IPI00928637 ProteinModelPortal:F1Q5T4
Ensembl:ENSDART00000134461 ArrayExpress:F1Q5T4 Bgee:F1Q5T4
Uniprot:F1Q5T4
Length = 492
Score = 330 (121.2 bits), Expect = 1.0e-29, P = 1.0e-29
Identities = 82/218 (37%), Positives = 128/218 (58%)
Query: 47 ENFDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGN---DVIAQAQSGTGKTATFSI 103
+ F+++ L +LL+G+Y GF +PS IQ+ A+ P + ++IAQ+QSGTGKTA F +
Sbjct: 84 KTFEELRLKPQLLKGVYEMGFNRPSKIQENAL-PMMLAEPPQNLIAQSQSGTGKTAAFVL 142
Query: 104 SILQQVDQNIKECQALILAPTRELAQQIQKVVIALGDFM-SVSCHACIGGTIVRDDIRKL 162
++L VD K Q L ++PT ELA Q KV+ +G F V+ + G + +R
Sbjct: 143 AMLSHVDPACKWSQCLCISPTYELALQTGKVIEQMGKFYPEVTLAYAVRGHRMERGVRIK 202
Query: 163 EAGAQVVVGTPGRVFDM-ISRGALSTKQIRMFVLDEADEMLS-RGFKDQIYDVFKHLNND 220
+ Q+V+GTPG V D I + K+I++FVLDEAD M++ +G +DQ + + L
Sbjct: 203 D---QIVIGTPGTVLDWCIKLKLIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPKG 259
Query: 221 VQVILLSATMPADVLDVSMKFMRDPIKILVKKEELTLE 258
Q++L SAT V + + + DP I +K+EE TL+
Sbjct: 260 CQMLLFSATFEDSVWKFAERVVPDPNIIKLKREEETLD 297
>CGD|CAL0005725 [details] [associations]
symbol:PRP5 species:5476 "Candida albicans" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0008186 "RNA-dependent ATPase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 CGD:CAL0005725 GO:GO:0005524
GO:GO:0005634 GO:GO:0008380 GO:GO:0006397 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 EMBL:AACQ01000029
EMBL:AACQ01000028 KO:K12811 RefSeq:XP_719806.1 RefSeq:XP_719923.1
ProteinModelPortal:Q5ADL0 GeneID:3638447 GeneID:3638635
KEGG:cal:CaO19.14123 KEGG:cal:CaO19.6831 Uniprot:Q5ADL0
Length = 884
Score = 329 (120.9 bits), Expect = 1.1e-29, Sum P(2) = 1.1e-29
Identities = 74/195 (37%), Positives = 119/195 (61%)
Query: 67 FEKPSAIQQRAIIPCVRGNDVIAQAQSGTGKTATFSISILQQV-DQNI-KECQA---LIL 121
FEKPSAIQ +A+ + G DVI A++G+GKT ++ + +L+ + DQ K+ Q LIL
Sbjct: 314 FEKPSAIQSQALPTILSGRDVIGIAKTGSGKTLSYVLPMLRHIQDQQFSKDNQGPIGLIL 373
Query: 122 APTRELAQQIQKVVIAL---GDFMSVSCHACIGGTIVRDDIRKLEAGAQVVVGTPGRVFD 178
+PTRELA QI+K ++ + + V C C GG+ + + I +L+ G +++VGTPGRV D
Sbjct: 374 SPTRELALQIEKEILNFTKRNNNLRVCC--CYGGSSIENQINELKKGVEIIVGTPGRVID 431
Query: 179 MISRGA---LSTKQIRMFVLDEADEMLSRGFKDQIYDVFKHLNNDVQVILLSATMPADVL 235
+++ + L+ K+ VLDEAD M GF+ Q+ + + D Q +L SAT P +
Sbjct: 432 LLAANSGRVLNLKRCTFVVLDEADRMFDLGFEPQVNKILTQIRPDRQTVLFSATFPRKME 491
Query: 236 DVSMKFMRDPIKILV 250
++ + + DP+ I+V
Sbjct: 492 TLAKQILTDPVVIIV 506
Score = 36 (17.7 bits), Expect = 1.1e-29, Sum P(2) = 1.1e-29
Identities = 8/19 (42%), Positives = 8/19 (42%)
Query: 10 EDPKNGPAENEAEQPAYNG 28
E G ENE E Y G
Sbjct: 189 ESIPEGDVENEKENDDYGG 207
>UNIPROTKB|Q5ADL0 [details] [associations]
symbol:PRP5 "Pre-mRNA-processing ATP-dependent RNA helicase
PRP5" species:237561 "Candida albicans SC5314" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 CGD:CAL0005725 GO:GO:0005524
GO:GO:0005634 GO:GO:0008380 GO:GO:0006397 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 EMBL:AACQ01000029
EMBL:AACQ01000028 KO:K12811 RefSeq:XP_719806.1 RefSeq:XP_719923.1
ProteinModelPortal:Q5ADL0 GeneID:3638447 GeneID:3638635
KEGG:cal:CaO19.14123 KEGG:cal:CaO19.6831 Uniprot:Q5ADL0
Length = 884
Score = 329 (120.9 bits), Expect = 1.1e-29, Sum P(2) = 1.1e-29
Identities = 74/195 (37%), Positives = 119/195 (61%)
Query: 67 FEKPSAIQQRAIIPCVRGNDVIAQAQSGTGKTATFSISILQQV-DQNI-KECQA---LIL 121
FEKPSAIQ +A+ + G DVI A++G+GKT ++ + +L+ + DQ K+ Q LIL
Sbjct: 314 FEKPSAIQSQALPTILSGRDVIGIAKTGSGKTLSYVLPMLRHIQDQQFSKDNQGPIGLIL 373
Query: 122 APTRELAQQIQKVVIAL---GDFMSVSCHACIGGTIVRDDIRKLEAGAQVVVGTPGRVFD 178
+PTRELA QI+K ++ + + V C C GG+ + + I +L+ G +++VGTPGRV D
Sbjct: 374 SPTRELALQIEKEILNFTKRNNNLRVCC--CYGGSSIENQINELKKGVEIIVGTPGRVID 431
Query: 179 MISRGA---LSTKQIRMFVLDEADEMLSRGFKDQIYDVFKHLNNDVQVILLSATMPADVL 235
+++ + L+ K+ VLDEAD M GF+ Q+ + + D Q +L SAT P +
Sbjct: 432 LLAANSGRVLNLKRCTFVVLDEADRMFDLGFEPQVNKILTQIRPDRQTVLFSATFPRKME 491
Query: 236 DVSMKFMRDPIKILV 250
++ + + DP+ I+V
Sbjct: 492 TLAKQILTDPVVIIV 506
Score = 36 (17.7 bits), Expect = 1.1e-29, Sum P(2) = 1.1e-29
Identities = 8/19 (42%), Positives = 8/19 (42%)
Query: 10 EDPKNGPAENEAEQPAYNG 28
E G ENE E Y G
Sbjct: 189 ESIPEGDVENEKENDDYGG 207
>UNIPROTKB|Q3ZBV2 [details] [associations]
symbol:DDX19A "ATP-dependent RNA helicase DDX19A"
species:9913 "Bos taurus" [GO:0031965 "nuclear membrane"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005643
"nuclear pore" evidence=IEA] [GO:0051028 "mRNA transport"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0015031 GO:GO:0031965 GO:GO:0005643
GO:GO:0003723 GO:GO:0051028 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 KO:K01529 GO:GO:0008026 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00530000063236 EMBL:BC103093 IPI:IPI00788586
RefSeq:NP_001029743.1 UniGene:Bt.49612 HSSP:Q9UHL0
ProteinModelPortal:Q3ZBV2 SMR:Q3ZBV2 PRIDE:Q3ZBV2
Ensembl:ENSBTAT00000004645 GeneID:529929 KEGG:bta:529929 CTD:55308
HOVERGEN:HBG107989 InParanoid:Q3ZBV2 OMA:MMAINTI OrthoDB:EOG46MBJK
NextBio:20875139 ArrayExpress:Q3ZBV2 Uniprot:Q3ZBV2
Length = 478
Score = 328 (120.5 bits), Expect = 1.3e-29, P = 1.3e-29
Identities = 83/219 (37%), Positives = 132/219 (60%)
Query: 47 ENFDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGN---DVIAQAQSGTGKTATFSI 103
++F+++ L +LL+G+YA GF +PS IQ+ A+ P + ++IAQ+QSGTGKTA F +
Sbjct: 91 KSFEELRLKPQLLQGVYAMGFNRPSKIQENAL-PMMLAEPPQNLIAQSQSGTGKTAAFVL 149
Query: 104 SILQQVDQNIKECQALILAPTRELAQQIQKVVIALGDFMSVS--CHACIGGTIVRDDIRK 161
++L +V+ + Q L L+PT ELA Q KV+ +G F +A G + R +K
Sbjct: 150 AMLSRVEPAERYPQCLCLSPTYELALQTGKVIEQMGKFHPELKLAYAVRGNKLERG--QK 207
Query: 162 LEAGAQVVVGTPGRVFDMISR-GALSTKQIRMFVLDEADEMLS-RGFKDQIYDVFKHLNN 219
+ +V+GTPG V D S+ + K+I++FVLDEAD M++ +G +DQ + + L
Sbjct: 208 ISE--HIVIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPR 265
Query: 220 DVQVILLSATMPADVLDVSMKFMRDPIKILVKKEELTLE 258
+ Q++L SAT V + K + DP I +K+EE TL+
Sbjct: 266 NCQMLLFSATFEDSVWKFAQKVVPDPNIIKLKREEETLD 304
>UNIPROTKB|Q58DE5 [details] [associations]
symbol:DDX19L "ATP-dependent RNA helicase DDX19A"
species:9913 "Bos taurus" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR011545
Pfam:PF00270 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00530000063236
UniGene:Bt.49612 HOVERGEN:HBG107989 EMBL:DAAA02045970 EMBL:BT021652
IPI:IPI00694012 SMR:Q58DE5 Ensembl:ENSBTAT00000027604
Uniprot:Q58DE5
Length = 394
Score = 328 (120.5 bits), Expect = 1.3e-29, P = 1.3e-29
Identities = 83/219 (37%), Positives = 132/219 (60%)
Query: 47 ENFDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGN---DVIAQAQSGTGKTATFSI 103
++F+++ L +LL+G+YA GF +PS IQ+ A+ P + ++IAQ+QSGTGKTA F +
Sbjct: 91 KSFEELRLKPQLLQGVYAMGFNRPSKIQENAL-PMMLAEPPQNLIAQSQSGTGKTAAFVL 149
Query: 104 SILQQVDQNIKECQALILAPTRELAQQIQKVVIALGDFMSVS--CHACIGGTIVRDDIRK 161
++L +V+ + Q L L+PT ELA Q KV+ +G F +A G + R +K
Sbjct: 150 AMLSRVEPAERYPQCLCLSPTYELALQTGKVIEQMGKFHPELKLAYAVRGNKLERG--QK 207
Query: 162 LEAGAQVVVGTPGRVFDMISR-GALSTKQIRMFVLDEADEMLS-RGFKDQIYDVFKHLNN 219
+ +V+GTPG V D S+ + K+I++FVLDEAD M++ +G +DQ + + L
Sbjct: 208 ISE--HIVIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPR 265
Query: 220 DVQVILLSATMPADVLDVSMKFMRDPIKILVKKEELTLE 258
+ Q++L SAT V + K + DP I +K+EE TL+
Sbjct: 266 NCQMLLFSATFEDSVWKFAQKVVPDPNIIKLKREEETLD 304
>UNIPROTKB|E2RR50 [details] [associations]
symbol:DDX19A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 OMA:PQAICLA GeneTree:ENSGT00530000063236 CTD:55308
EMBL:AAEX03004077 RefSeq:XP_536790.2 ProteinModelPortal:E2RR50
Ensembl:ENSCAFT00000032061 GeneID:479658 KEGG:cfa:479658
NextBio:20854805 Uniprot:E2RR50
Length = 478
Score = 328 (120.5 bits), Expect = 1.3e-29, P = 1.3e-29
Identities = 83/219 (37%), Positives = 132/219 (60%)
Query: 47 ENFDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGN---DVIAQAQSGTGKTATFSI 103
++F+++ L +LL+G+YA GF +PS IQ+ A+ P + ++IAQ+QSGTGKTA F +
Sbjct: 91 KSFEELRLKPQLLQGVYAMGFNRPSKIQENAL-PMMLAEPPQNLIAQSQSGTGKTAAFVL 149
Query: 104 SILQQVDQNIKECQALILAPTRELAQQIQKVVIALGDFMSVS--CHACIGGTIVRDDIRK 161
++L +V+ + Q L L+PT ELA Q KV+ +G F +A G + R +K
Sbjct: 150 AMLSRVEPAERYPQCLCLSPTYELALQTGKVIEQMGKFHPELKLAYAVRGNKLERG--QK 207
Query: 162 LEAGAQVVVGTPGRVFDMISR-GALSTKQIRMFVLDEADEMLS-RGFKDQIYDVFKHLNN 219
+ +V+GTPG V D S+ + K+I++FVLDEAD M++ +G +DQ + + L
Sbjct: 208 ISE--HIVIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPK 265
Query: 220 DVQVILLSATMPADVLDVSMKFMRDPIKILVKKEELTLE 258
+ Q++L SAT V + K + DP I +K+EE TL+
Sbjct: 266 NCQMLLFSATFEDSVWKFAQKVVPDPNIIKLKREEETLD 304
>UNIPROTKB|I3LC00 [details] [associations]
symbol:DDX19A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 OMA:PQAICLA GeneTree:ENSGT00530000063236
EMBL:CU929739 RefSeq:XP_003126917.1 Ensembl:ENSSSCT00000029799
GeneID:100524144 KEGG:ssc:100524144 Uniprot:I3LC00
Length = 478
Score = 328 (120.5 bits), Expect = 1.3e-29, P = 1.3e-29
Identities = 83/219 (37%), Positives = 132/219 (60%)
Query: 47 ENFDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGN---DVIAQAQSGTGKTATFSI 103
++F+++ L +LL+G+YA GF +PS IQ+ A+ P + ++IAQ+QSGTGKTA F +
Sbjct: 91 KSFEELRLKPQLLQGVYAMGFNRPSKIQENAL-PMMLAEPPQNLIAQSQSGTGKTAAFVL 149
Query: 104 SILQQVDQNIKECQALILAPTRELAQQIQKVVIALGDFMSVS--CHACIGGTIVRDDIRK 161
++L +V+ + Q L L+PT ELA Q KV+ +G F +A G + R +K
Sbjct: 150 AMLSRVEPAERYPQCLCLSPTYELALQTGKVIEQMGKFHPELKLAYAVRGNKLERG--QK 207
Query: 162 LEAGAQVVVGTPGRVFDMISR-GALSTKQIRMFVLDEADEMLS-RGFKDQIYDVFKHLNN 219
+ +V+GTPG V D S+ + K+I++FVLDEAD M++ +G +DQ + + L
Sbjct: 208 ISE--HIVIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPR 265
Query: 220 DVQVILLSATMPADVLDVSMKFMRDPIKILVKKEELTLE 258
+ Q++L SAT V + K + DP I +K+EE TL+
Sbjct: 266 NCQMLLFSATFEDSVWKFAQKVVPDPNIIKLKREEETLD 304
>SGD|S000001107 [details] [associations]
symbol:RRP3 "Protein involved in rRNA processing"
species:4932 "Saccharomyces cerevisiae" [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IDA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0000462 "maturation of
SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=IMP] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0008186 "RNA-dependent ATPase activity"
evidence=IDA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IC] [GO:0006364 "rRNA processing"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 SGD:S000001107 GO:GO:0005524
GO:GO:0005730 EMBL:BK006934 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 EMBL:U00061 HOGENOM:HOG000268802
GO:GO:0000462 GeneTree:ENSGT00670000098028 KO:K14777 OMA:IFIPSKF
OrthoDB:EOG4ZPJ3P EMBL:AY389302 EMBL:AY389303 PIR:S46713
RefSeq:NP_011932.2 ProteinModelPortal:P38712 SMR:P38712
DIP:DIP-6533N IntAct:P38712 MINT:MINT-518716 STRING:P38712
PaxDb:P38712 PeptideAtlas:P38712 EnsemblFungi:YHR065C GeneID:856462
KEGG:sce:YHR065C CYGD:YHR065c NextBio:982111 Genevestigator:P38712
GermOnline:YHR065C Uniprot:P38712
Length = 501
Score = 329 (120.9 bits), Expect = 1.7e-29, P = 1.7e-29
Identities = 74/221 (33%), Positives = 121/221 (54%)
Query: 40 TNWDHVAENFDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGNDVIAQAQSGTGKTA 99
TN D E+F ++ L EL++ + KP+ IQ +AI P + G+D+I AQ+G+GKTA
Sbjct: 74 TNEDESFESFSELNLVPELIQACKNLNYSKPTPIQSKAIPPALEGHDIIGLAQTGSGKTA 133
Query: 100 TFSISILQQVDQNIKECQALILAPTRELAQQIQKVVIALGDFMSVSCHACIGGTIVRDDI 159
F+I IL ++ + + A ILAPTRELAQQI++ +LG M V +GG + D
Sbjct: 134 AFAIPILNRLWHDQEPYYACILAPTRELAQQIKETFDSLGSLMGVRSTCIVGGMNMMDQA 193
Query: 160 RKLEAGAQVVVGTPGRVFDMISRG-ALSTKQIRMFVLDEADEMLSRGFKDQIYDVFKHL- 217
R L +++ TPGR+ D + S ++++ V+DEAD +L F + + K +
Sbjct: 194 RDLMRKPHIIIATPGRLMDHLENTKGFSLRKLKFLVMDEADRLLDMEFGPVLDRILKIIP 253
Query: 218 NNDVQVILLSATMPADVLDVSMKFMRDPIKILVKKEELTLE 258
+ L SATM + + + + +P+K V + T++
Sbjct: 254 TQERTTYLFSATMTSKIDKLQRASLTNPVKCAVSNKYQTVD 294
>UNIPROTKB|Q8ECL2 [details] [associations]
symbol:SO_3125 "ATP-dependent RNA helicase DEAD box family"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
ProtClustDB:CLSK907013 RefSeq:NP_718686.1 ProteinModelPortal:Q8ECL2
GeneID:1170814 KEGG:son:SO_3125 PATRIC:23525896 OMA:AHLIKQH
Uniprot:Q8ECL2
Length = 427
Score = 326 (119.8 bits), Expect = 2.1e-29, P = 2.1e-29
Identities = 78/221 (35%), Positives = 124/221 (56%)
Query: 48 NFDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCV-RGNDVIAQAQSGTGKTATFSISIL 106
+F ++ + L + G+ P+ +Q A IP V G DV+A A +G+GKTA F++ +L
Sbjct: 10 SFAELGIIAPLGNRLTELGYVSPTPVQA-ATIPAVLSGRDVLAGANTGSGKTAAFALPLL 68
Query: 107 QQV------DQNIKECQALILAPTRELAQQIQKVVIALGDFMS--VSCHACIGGTIVRDD 158
Q++ D++ + L+L PTRELAQQ+ ++ + + A GG V
Sbjct: 69 QRLSEAKSADKSAGVVRCLVLVPTRELAQQVADSFLSYASHFNGQLKIVAAFGGVSVNLQ 128
Query: 159 IRKLEAGAQVVVGTPGRVFDMISRGALSTKQIRMFVLDEADEMLSRGFKDQIYDVFKHLN 218
++ L AGA V+V TPGR+ D+++ AL Q+ FVLDEAD MLS GF +++ V L
Sbjct: 129 MQSLRAGADVLVATPGRLLDLLASNALKLTQVSAFVLDEADRMLSLGFTEELEQVLAALP 188
Query: 219 NDVQVILLSATMPADVLDVSMKFMRDPIKI-LVKKEELTLE 258
Q +L SAT P +V ++ K + P++ L ++E T+E
Sbjct: 189 RQKQTLLFSATFPEEVRALTTKLLHQPLEYHLQSEQESTIE 229
>TIGR_CMR|SO_3125 [details] [associations]
symbol:SO_3125 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
ProtClustDB:CLSK907013 RefSeq:NP_718686.1 ProteinModelPortal:Q8ECL2
GeneID:1170814 KEGG:son:SO_3125 PATRIC:23525896 OMA:AHLIKQH
Uniprot:Q8ECL2
Length = 427
Score = 326 (119.8 bits), Expect = 2.1e-29, P = 2.1e-29
Identities = 78/221 (35%), Positives = 124/221 (56%)
Query: 48 NFDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCV-RGNDVIAQAQSGTGKTATFSISIL 106
+F ++ + L + G+ P+ +Q A IP V G DV+A A +G+GKTA F++ +L
Sbjct: 10 SFAELGIIAPLGNRLTELGYVSPTPVQA-ATIPAVLSGRDVLAGANTGSGKTAAFALPLL 68
Query: 107 QQV------DQNIKECQALILAPTRELAQQIQKVVIALGDFMS--VSCHACIGGTIVRDD 158
Q++ D++ + L+L PTRELAQQ+ ++ + + A GG V
Sbjct: 69 QRLSEAKSADKSAGVVRCLVLVPTRELAQQVADSFLSYASHFNGQLKIVAAFGGVSVNLQ 128
Query: 159 IRKLEAGAQVVVGTPGRVFDMISRGALSTKQIRMFVLDEADEMLSRGFKDQIYDVFKHLN 218
++ L AGA V+V TPGR+ D+++ AL Q+ FVLDEAD MLS GF +++ V L
Sbjct: 129 MQSLRAGADVLVATPGRLLDLLASNALKLTQVSAFVLDEADRMLSLGFTEELEQVLAALP 188
Query: 219 NDVQVILLSATMPADVLDVSMKFMRDPIKI-LVKKEELTLE 258
Q +L SAT P +V ++ K + P++ L ++E T+E
Sbjct: 189 RQKQTLLFSATFPEEVRALTTKLLHQPLEYHLQSEQESTIE 229
>MGI|MGI:2385884 [details] [associations]
symbol:Ddx27 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 27"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 MGI:MGI:2385884 GO:GO:0005524
GO:GO:0005634 EMBL:CH466551 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 CTD:55661
GeneTree:ENSGT00550000074997 HOGENOM:HOG000265456
HOVERGEN:HBG106162 KO:K13181 OMA:TRTFTDH OrthoDB:EOG4NVZJV
EMBL:AK134274 EMBL:AK138442 EMBL:AL591711 EMBL:BC011321
EMBL:BC024730 EMBL:BC026381 IPI:IPI00122038 IPI:IPI00230236
RefSeq:NP_694705.2 UniGene:Mm.295031 ProteinModelPortal:Q921N6
SMR:Q921N6 PhosphoSite:Q921N6 PaxDb:Q921N6 PRIDE:Q921N6
Ensembl:ENSMUST00000018143 Ensembl:ENSMUST00000150571 GeneID:228889
KEGG:mmu:228889 UCSC:uc008nza.1 InParanoid:Q3UUG2 NextBio:379240
Bgee:Q921N6 CleanEx:MM_DDX27 Genevestigator:Q921N6
GermOnline:ENSMUSG00000017999 Uniprot:Q921N6
Length = 760
Score = 334 (122.6 bits), Expect = 2.7e-29, P = 2.7e-29
Identities = 77/227 (33%), Positives = 129/227 (56%)
Query: 31 GMAVDGLIE--TNWDHVAENFDDMELSEELLRGIYAYGFEKPSAIQQRAIIPC-VRGNDV 87
G A G E + +D + +F DM LS LL+ I A GF++P+ IQ +A IP + G D+
Sbjct: 167 GQAAGGFFEDASEYDK-SLSFQDMNLSRPLLKAITAMGFKQPTPIQ-KACIPVGLLGKDI 224
Query: 88 IAQAQSGTGKTATFSISILQQVDQNIKEC---QALILAPTRELAQQIQKVVIALGDFMSV 144
A A +GTGKTA F++ +L+++ ++ + L+L PTREL Q+ V L F S+
Sbjct: 225 CACAATGTGKTAAFALPVLERLIYKPRQAAVTRVLVLVPTRELGIQVHSVTKQLAQFCSI 284
Query: 145 SCHACIGGTIVRDDIRKLEAGAQVVVGTPGRVFDMISR-GALSTKQIRMFVLDEADEMLS 203
+ +GG V+ L A +++ TPGR+ D + + I + +LDEAD ML
Sbjct: 285 TTCLAVGGLDVKSQEAALRAAPDILIATPGRLIDHLHNCPSFHLSSIEVLILDEADRMLD 344
Query: 204 RGFKDQIYDVFKHLNNDVQVILLSATMPADVLDVSMKFMRDPIKILV 250
F++Q+ ++ + ++ Q +L SATM +V D++ +++P++I V
Sbjct: 345 EYFEEQMKEIIRMCSHHRQTMLFSATMTDEVKDLASVSLKNPVRIFV 391
>CGD|CAL0005460 [details] [associations]
symbol:DBP3 species:5476 "Candida albicans" [GO:0005730
"nucleolus" evidence=IEA] [GO:0030687 "preribosome, large subunit
precursor" evidence=IEA] [GO:0000464 "endonucleolytic cleavage in
ITS1 upstream of 5.8S rRNA from tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA] [GO:0008186
"RNA-dependent ATPase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 CGD:CAL0005460
GO:GO:0005524 GO:GO:0005730 GO:GO:0003723 EMBL:AACQ01000001
EMBL:AACQ01000002 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 RefSeq:XP_723365.1 RefSeq:XP_723554.1
ProteinModelPortal:Q5APT8 STRING:Q5APT8 GeneID:3634868
GeneID:3635070 KEGG:cal:CaO19.12334 KEGG:cal:CaO19.4870 KO:K14811
Uniprot:Q5APT8
Length = 564
Score = 330 (121.2 bits), Expect = 2.8e-29, P = 2.8e-29
Identities = 76/213 (35%), Positives = 124/213 (58%)
Query: 48 NFDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGNDVIAQAQSGTGKTATFSISILQ 107
+FD ++L+ + + F+KP+ IQ + + G DVI A++G+GKT F + +
Sbjct: 156 SFDQVQLTSAITSKLSK--FDKPTPIQSVSWPFLLSGKDVIGVAETGSGKTFAFGVPAIN 213
Query: 108 QV--DQNIKECQALILAPTRELAQQIQKVVIALGDFMSVSCHACIGGTIVRDDIRKLEAG 165
+ N K L ++PTRELA QI +I L V+C A GG D IRK++
Sbjct: 214 NIITTGNTKTLSVLCISPTRELALQIYDNLIELTADSGVNCVAVYGGVSKDDQIRKIKT- 272
Query: 166 AQVVVGTPGRVFDMISRGALSTKQIRMFVLDEADEMLSRGFKDQIYDVFKHLNN-DVQVI 224
A VVV TPGR+ D+I+ GA++ ++ VLDEAD ML +GF++ I + + +N + Q +
Sbjct: 273 ANVVVATPGRLVDLINDGAINLGKVNYLVLDEADRMLEKGFEEDIKTIISNTSNSERQTL 332
Query: 225 LLSATMPADVLDVSMKFMRDPIKILV-KKEELT 256
+ +AT P +V +++ FM P+K+ V ++EL+
Sbjct: 333 MFTATWPKEVRELANNFMNSPVKVTVGDRDELS 365
>SGD|S000003046 [details] [associations]
symbol:DBP3 "RNA-Dependent ATPase, member of DExD/H-box
family" species:4932 "Saccharomyces cerevisiae" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=IDA] [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0030687 "preribosome, large
subunit precursor" evidence=IDA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0042254 "ribosome biogenesis" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008186 "RNA-dependent ATPase activity" evidence=IDA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0000464
"endonucleolytic cleavage in ITS1 upstream of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 SGD:S000003046 GO:GO:0005524
GO:GO:0005730 EMBL:BK006941 GO:GO:0003723 GO:GO:0030687
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 KO:K14811 OrthoDB:EOG42JS0S EMBL:M80437
EMBL:Z72600 PIR:S30805 RefSeq:NP_011437.3 RefSeq:NP_011442.3
ProteinModelPortal:P20447 SMR:P20447 DIP:DIP-2668N IntAct:P20447
MINT:MINT-1164200 STRING:P20447 PaxDb:P20447 PeptideAtlas:P20447
EnsemblFungi:YGL078C GeneID:852802 GeneID:852806 KEGG:sce:YGL073W
KEGG:sce:YGL078C CYGD:YGL078c GeneTree:ENSGT00680000100003
KO:K09419 OMA:EEEWPEK NextBio:972321 Genevestigator:P20447
GermOnline:YGL078C GO:GO:0000464 Uniprot:P20447
Length = 523
Score = 328 (120.5 bits), Expect = 3.0e-29, P = 3.0e-29
Identities = 73/213 (34%), Positives = 123/213 (57%)
Query: 48 NFDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGNDVIAQAQSGTGKTATFSISILQ 107
+FD + L + I F KP+ IQ A + G DV+ A++G+GKT F + +
Sbjct: 115 SFDYLSLDSSIQAEISK--FPKPTPIQAVAWPYLLSGKDVVGVAETGSGKTFAFGVPAIS 172
Query: 108 QV--DQNIKECQALILAPTRELAQQIQKVVIALGDFMSVSCHACIGGTIVRDDIRKLEAG 165
+ DQ + Q L+++PTRELA QI +I L D + + C C+ G + +D+ R
Sbjct: 173 HLMNDQKKRGIQVLVISPTRELASQIYDNLIVLTDKVGMQC-CCVYGGVPKDEQRIQLKK 231
Query: 166 AQVVVGTPGRVFDMISRGALSTKQIRMFVLDEADEMLSRGFKDQIYDVFKHLN-NDVQVI 224
+QVVV TPGR+ D++ G++ Q+ VLDEAD ML +GF++ I ++ + + + Q +
Sbjct: 232 SQVVVATPGRLLDLLQEGSVDLSQVNYLVLDEADRMLEKGFEEDIKNIIRETDASKRQTL 291
Query: 225 LLSATMPADVLDVSMKFMRDPIKILV-KKEELT 256
+ +AT P +V +++ FM +PIK+ + ++LT
Sbjct: 292 MFTATWPKEVRELASTFMNNPIKVSIGNTDQLT 324
>UNIPROTKB|H9KYU4 [details] [associations]
symbol:DDX25 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006406 "mRNA export from nucleus" evidence=IEA]
[GO:0006417 "regulation of translation" evidence=IEA] [GO:0007286
"spermatid development" evidence=IEA] [GO:0033391 "chromatoid body"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00530000063236 OMA:WHFAERI EMBL:AADN02053079
Ensembl:ENSGALT00000000632 Uniprot:H9KYU4
Length = 416
Score = 324 (119.1 bits), Expect = 3.4e-29, P = 3.4e-29
Identities = 84/215 (39%), Positives = 127/215 (59%)
Query: 49 FDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGN---DVIAQAQSGTGKTATFSISI 105
F+++ L +ELL+G+Y GF +PS IQ A+ P + + ++IAQ+QSGTGKTA F +++
Sbjct: 32 FEELHLKKELLQGVYTMGFNRPSKIQANAL-PILMAHPPQNLIAQSQSGTGKTAAFVLAM 90
Query: 106 LQQVDQNIKECQALILAPTRELAQQIQKVVIALGDFMS-VSCHACIGGTIVRDDIRKLEA 164
L +V + Q L LAPT ELA QI V +G F + + + G V LE
Sbjct: 91 LSRVKGAERYPQCLCLAPTYELALQIGHVAEKMGRFCNDIRVTYAVQGNRVSPGT-VLEE 149
Query: 165 GAQVVVGTPGRVFDM-ISRGALSTKQIRMFVLDEADEML-SRGFKDQIYDVFKHLNNDVQ 222
Q+V+GTPG + D R L+ ++I MFVLDEAD M+ ++GF Q + + L D Q
Sbjct: 150 --QIVIGTPGTMLDWCFKRRLLNMRRICMFVLDEADVMIDTQGFSSQSIRIQRALPKDCQ 207
Query: 223 VILLSATMPADVLDVSMKFMRDPIKILVKKEELTL 257
++L SAT + +++ + PI I +++EELTL
Sbjct: 208 MLLFSATFKETLWKFALQIVSRPIIIKLRQEELTL 242
>TIGR_CMR|VC_2564 [details] [associations]
symbol:VC_2564 "ATP-dependent RNA helicase DbpA"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083
KO:K05591 ProtClustDB:PRK11776 InterPro:IPR005580 Pfam:PF03880
OMA:THEKSTI PIR:B82060 RefSeq:NP_232192.1 ProteinModelPortal:Q9KP15
DNASU:2615581 GeneID:2615581 KEGG:vch:VC2564 PATRIC:20084152
Uniprot:Q9KP15
Length = 460
Score = 323 (118.8 bits), Expect = 4.4e-29, P = 4.4e-29
Identities = 70/207 (33%), Positives = 113/207 (54%)
Query: 46 AENFDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGNDVIAQAQSGTGKTATFSISI 105
A +F + L ELL + GF + IQ +++ ++G DVI Q ++G+GKTA F + +
Sbjct: 3 ANSFAALNLKPELLANLETMGFATMTPIQAQSLPAILKGQDVIGQGKTGSGKTAAFGLGV 62
Query: 106 LQQVDQNIKECQALILAPTRELAQQIQKVVIALGDFM-SVSCHACIGGTIVRDDIRKLEA 164
L ++ QAL+L PTRELA Q+ + LG + ++ GG + I LE
Sbjct: 63 LSNLNVKRFRVQALVLCPTRELADQVATDIRTLGRAIHNIKVLTLCGGMPMGPQIGSLEH 122
Query: 165 GAQVVVGTPGRVFDMISRGALSTKQIRMFVLDEADEMLSRGFKDQIYDVFKHLNNDVQVI 224
GA ++VGTPGR+ D +S+ + ++ VLDEAD ML GF++ + + + Q +
Sbjct: 123 GAHILVGTPGRILDHLSKDRIDLSELNTLVLDEADRMLEMGFQEALEAIIAAAPAERQTL 182
Query: 225 LLSATMPADVLDVSMKFMRDPIKILVK 251
L SAT PA + ++ R+ + I V+
Sbjct: 183 LFSATYPASIEQIAQSVTRNALMIKVE 209
>TAIR|locus:2101993 [details] [associations]
symbol:LOS4 "LOW EXPRESSION OF OSMOTICALLY RESPONSIVE
GENES 4" species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA;ISS] [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0009409 "response to cold" evidence=IMP]
[GO:0005635 "nuclear envelope" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0008186 "RNA-dependent ATPase
activity" evidence=IDA] [GO:0009408 "response to heat"
evidence=IMP] [GO:0009737 "response to abscisic acid stimulus"
evidence=IMP] [GO:0016973 "poly(A)+ mRNA export from nucleus"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0005829 "cytosol" evidence=RCA] [GO:0006457 "protein folding"
evidence=RCA] [GO:0009644 "response to high light intensity"
evidence=RCA] [GO:0010286 "heat acclimation" evidence=RCA]
[GO:0042542 "response to hydrogen peroxide" evidence=RCA]
[GO:0051604 "protein maturation" evidence=RCA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005886 GO:GO:0005524
GO:GO:0009737 GO:GO:0005737 GO:GO:0005635 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0009409 GO:GO:0009408 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 KO:K01529
GO:GO:0008026 EMBL:AL132958 eggNOG:COG0513 HOGENOM:HOG000268797
GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0008186
GO:GO:0016973 EMBL:AY057548 EMBL:BT002444 EMBL:BT008867
IPI:IPI00533725 PIR:T46157 RefSeq:NP_190879.1 UniGene:At.35224
UniGene:At.675 ProteinModelPortal:Q93ZG7 SMR:Q93ZG7 PaxDb:Q93ZG7
PRIDE:Q93ZG7 EnsemblPlants:AT3G53110.1 GeneID:824477
KEGG:ath:AT3G53110 GeneFarm:1014 TAIR:At3g53110 InParanoid:Q93ZG7
OMA:ESATTFE PhylomeDB:Q93ZG7 ProtClustDB:CLSN2684906
Genevestigator:Q93ZG7 GermOnline:AT3G53110 Uniprot:Q93ZG7
Length = 496
Score = 325 (119.5 bits), Expect = 4.4e-29, P = 4.4e-29
Identities = 79/223 (35%), Positives = 124/223 (55%)
Query: 46 AENFDDMELSEELLRGIYA-YGFEKPSAIQQRAIIPCVRG---NDVIAQAQSGTGKTATF 101
A F+D+ LS EL++G+Y FEKPS IQ ++ P + +IAQA +G+GKT F
Sbjct: 90 ASRFEDLNLSPELMKGLYVEMKFEKPSKIQAISL-PMIMTPPHKHLIAQAHNGSGKTTCF 148
Query: 102 SISILQQVDQNIKECQALILAPTRELAQQIQKVVIALGDFMSVSCHACIGGTI--VRDDI 159
+ +L +VD ++E QAL + PTRELA Q +V+ +G F ++ + +
Sbjct: 149 VLGMLSRVDPTLREPQALCICPTRELANQNMEVLQKMGKFTGITAELAVPDSTRGAPAAT 208
Query: 160 RKLEAGAQVVVGTPGRVFDMISRGALSTKQIRMFVLDEADEMLSR-GFKDQIYDVFKHL- 217
R A VV+GTPG + ++ L +++ V DEAD ML+ GF+D + K +
Sbjct: 209 RGAPVSAHVVIGTPGTLKKWMAFKRLGLNHLKILVFDEADHMLATDGFRDDSLKIMKDIG 268
Query: 218 --NNDVQVILLSATMPADVLDVSMKFMRDPIKILVKKEELTLE 258
N + QV+L SAT V D + ++DP ++ VK+E+L L+
Sbjct: 269 RVNPNFQVLLFSATFNETVKDFVARTVKDPNQLFVKREDLALD 311
>UNIPROTKB|Q0C4B9 [details] [associations]
symbol:HNE_0695 "Putative ATP-dependent RNA helicase RhlE"
species:228405 "Hyphomonas neptunium ATCC 15444" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:CP000158
GenomeReviews:CP000158_GR GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807
RefSeq:YP_759424.1 ProteinModelPortal:Q0C4B9 STRING:Q0C4B9
GeneID:4287361 KEGG:hne:HNE_0695 PATRIC:32214196 OMA:LPMITIL
BioCyc:HNEP228405:GI69-738-MONOMER Uniprot:Q0C4B9
Length = 536
Score = 327 (120.2 bits), Expect = 4.5e-29, P = 4.5e-29
Identities = 74/213 (34%), Positives = 112/213 (52%)
Query: 49 FDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGNDVIAQAQSGTGKTATFSISILQQ 108
F D L+E +L+ + G+ P+ IQ+ AI + G DV AQ+GTGKTA F + ++Q+
Sbjct: 6 FADFGLAENILKAVTESGYTIPTPIQREAIPHILMGGDVTGVAQTGTGKTAAFVLPMIQR 65
Query: 109 VDQNIKECQ---ALILAPTRELAQQIQKVVIALGDFMSVSCHACIGGTIVRDDIRKLEAG 165
+ + LIL PTRELA Q+ + G ++ ++ IGG ++ L+ G
Sbjct: 66 LSTGRARARMPRCLILCPTRELAAQVAENFEKYGKYLKLTMALLIGGVSFKEQETLLQRG 125
Query: 166 AQVVVGTPGRVFDMISRGALSTKQIRMFVLDEADEMLSRGFKDQIYDVFKHLNNDVQVIL 225
V++ TPGR+ D RG L + ++DEAD ML GF I + L + Q +L
Sbjct: 126 VDVLIATPGRLMDQFDRGKLLMMGVETLIIDEADRMLDMGFIPDIEKICAKLPANRQTLL 185
Query: 226 LSATMPADVLDVSMKFMRDPIKILVKKEELTLE 258
SAT P D+ ++ F +DP KI V + T E
Sbjct: 186 FSATFPTDIQRLAKTFQKDPKKIEVTRPAQTAE 218
>UNIPROTKB|G3X7G8 [details] [associations]
symbol:DDX59 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005622 "intracellular" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0005622 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR007529 Pfam:PF04438 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00610000086076
CTD:83479 OMA:VTRPIID EMBL:DAAA02043967 EMBL:DAAA02043968
RefSeq:NP_001179318.1 UniGene:Bt.41740 Ensembl:ENSBTAT00000027398
GeneID:514901 KEGG:bta:514901 NextBio:20871562 Uniprot:G3X7G8
Length = 620
Score = 329 (120.9 bits), Expect = 5.3e-29, P = 5.3e-29
Identities = 73/209 (34%), Positives = 115/209 (55%)
Query: 48 NFDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGNDVIAQAQSGTGKTATFSISILQ 107
+F+ E L R + A G+E P+ IQ + I + G DV+A A +G+GKTA F + ++
Sbjct: 205 DFEHCGFPEALNRNLKASGYEVPTPIQMQMIPVGLLGRDVLASADTGSGKTAAFLLPVIL 264
Query: 108 QVDQNIKECQALILAPTRELAQQIQKVVIAL-GDFMSVSCHACIGGTIVRDDIRKLEAGA 166
+ K L+L PTRELA QI++ L + +GG +L
Sbjct: 265 RALSQSKSPSGLVLTPTRELAIQIERQAKELMSGLPCLRTALLVGGLPAPPQRHRLRQRI 324
Query: 167 QVVVGTPGRVFDMISRGALSTKQIRMFVLDEADEMLSRGFKDQIYDVFKHLNNDVQVILL 226
QV++ TPGR+ D+I + ++ I++ V+DEAD ML GF+ Q+ DV + L +D Q +L
Sbjct: 325 QVIIATPGRLLDIIKQRSVELGSIKIVVVDEADTMLKMGFQQQVLDVLEQLPHDCQTVLA 384
Query: 227 SATMPADVLDVSMKFMRDPIKILVKKEEL 255
SAT+PA V ++ + +RDP+ I + L
Sbjct: 385 SATIPASVEQLACQLLRDPVAITAGERNL 413
>UNIPROTKB|E1C187 [details] [associations]
symbol:DDX27 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00550000074997 OMA:TRTFTDH EMBL:AADN02019007
IPI:IPI00822640 Ensembl:ENSGALT00000011297 ArrayExpress:E1C187
Uniprot:E1C187
Length = 759
Score = 313 (115.2 bits), Expect = 5.8e-29, Sum P(2) = 5.8e-29
Identities = 72/209 (34%), Positives = 119/209 (56%)
Query: 48 NFDDMELSEELLRGIYAYGFEKPSAIQQRAIIPC-VRGNDVIAQAQSGT-GKTATFSISI 105
+F DM LS LL+ I A GF++P+ IQ +A IP + G D+ A A +GT GKTA F + +
Sbjct: 181 SFQDMNLSRPLLKAITALGFKQPTPIQ-KACIPVGLLGKDICACAATGTVGKTAAFILPV 239
Query: 106 LQQVDQNIKEC---QALILAPTRELAQQIQKVVIALGDFMSVSCHACIGGTIVRDDIRKL 162
L+++ ++ + L+L PTREL Q+ V L F SV+ +GG V+ L
Sbjct: 240 LERLIYKPRQAPITRVLVLVPTRELGIQVHSVTKQLAQFSSVTTCLAVGGLDVKTQEAAL 299
Query: 163 EAGAQVVVGTPGRVFDMISR-GALSTKQIRMFVLDEADEMLSRGFKDQIYDVFKHLNNDV 221
+G +++ TPGR+ D + + + + +LDEAD ML F++Q+ ++ + +
Sbjct: 300 RSGPDILIATPGRLIDHLHNCPSFHLSSVEVLILDEADRMLDEYFEEQMKEIIRLCSRHR 359
Query: 222 QVILLSATMPADVLDVSMKFMRDPIKILV 250
Q +L SATM +V D++ +++P +I V
Sbjct: 360 QTMLFSATMTEEVKDLASVSLKNPTRIFV 388
Score = 43 (20.2 bits), Expect = 5.8e-29, Sum P(2) = 5.8e-29
Identities = 12/26 (46%), Positives = 18/26 (69%)
Query: 6 GDNW-EDPKNGPAENEAE-QPAYNGP 29
GD E+P++G +E+E E +PA GP
Sbjct: 14 GDEGPEEPESGDSEDEEEVRPA-PGP 38
>UNIPROTKB|B4DRZ7 [details] [associations]
symbol:DDX19A "ATP-dependent RNA helicase DDX19A"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107989
UniGene:Hs.656037 HGNC:HGNC:25628 EMBL:AC012184 EMBL:AK299504
IPI:IPI01009735 SMR:B4DRZ7 STRING:B4DRZ7 Ensembl:ENST00000443119
UCSC:uc002eys.3 Uniprot:B4DRZ7
Length = 388
Score = 321 (118.1 bits), Expect = 7.1e-29, P = 7.1e-29
Identities = 82/209 (39%), Positives = 127/209 (60%)
Query: 57 ELLRGIYAYGFEKPSAIQQRAIIPCVRGN---DVIAQAQSGTGKTATFSISILQQVDQNI 113
+LL+G+YA GF +PS IQ+ A+ P + ++IAQ+QSGTGKTA F +++L +V+ +
Sbjct: 11 QLLQGVYAMGFNRPSKIQENAL-PMMLAEPPQNLIAQSQSGTGKTAAFVLAMLSRVEPSD 69
Query: 114 KECQALILAPTRELAQQIQKVVIALGDFMSVS--CHACIGGTIVRDDIRKLEAGAQVVVG 171
+ Q L L+PT ELA Q KV+ +G F +A G + R +K+ Q+V+G
Sbjct: 70 RYPQCLCLSPTYELALQTGKVIEQMGKFYPELKLAYAVRGNKLERG--QKISE--QIVIG 125
Query: 172 TPGRVFDMISR-GALSTKQIRMFVLDEADEMLS-RGFKDQIYDVFKHLNNDVQVILLSAT 229
TPG V D S+ + K+I++FVLDEAD M++ +G +DQ + + L + Q++L SAT
Sbjct: 126 TPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPRNCQMLLFSAT 185
Query: 230 MPADVLDVSMKFMRDPIKILVKKEELTLE 258
V + K + DP I +K+EE TL+
Sbjct: 186 FEDSVWKFAQKVVPDPNVIKLKREEETLD 214
>UNIPROTKB|I3L352 [details] [associations]
symbol:DDX19A "ATP-dependent RNA helicase DDX19A"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HGNC:HGNC:25628 EMBL:AC012184
Ensembl:ENST00000575878 Uniprot:I3L352
Length = 396
Score = 321 (118.1 bits), Expect = 7.1e-29, P = 7.1e-29
Identities = 82/209 (39%), Positives = 127/209 (60%)
Query: 57 ELLRGIYAYGFEKPSAIQQRAIIPCVRGN---DVIAQAQSGTGKTATFSISILQQVDQNI 113
+LL+G+YA GF +PS IQ+ A+ P + ++IAQ+QSGTGKTA F +++L +V+ +
Sbjct: 19 QLLQGVYAMGFNRPSKIQENAL-PMMLAEPPQNLIAQSQSGTGKTAAFVLAMLSRVEPSD 77
Query: 114 KECQALILAPTRELAQQIQKVVIALGDFMSVS--CHACIGGTIVRDDIRKLEAGAQVVVG 171
+ Q L L+PT ELA Q KV+ +G F +A G + R +K+ Q+V+G
Sbjct: 78 RYPQCLCLSPTYELALQTGKVIEQMGKFYPELKLAYAVRGNKLERG--QKISE--QIVIG 133
Query: 172 TPGRVFDMISR-GALSTKQIRMFVLDEADEMLS-RGFKDQIYDVFKHLNNDVQVILLSAT 229
TPG V D S+ + K+I++FVLDEAD M++ +G +DQ + + L + Q++L SAT
Sbjct: 134 TPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPRNCQMLLFSAT 193
Query: 230 MPADVLDVSMKFMRDPIKILVKKEELTLE 258
V + K + DP I +K+EE TL+
Sbjct: 194 FEDSVWKFAQKVVPDPNVIKLKREEETLD 222
>UNIPROTKB|B7Z5N6 [details] [associations]
symbol:DDX59 "cDNA FLJ56549, highly similar to Homo sapiens
DEAD (Asp-Glu-Ala-Asp) box polypeptide 59 (DDX59), transcript
variant 2, mRNA" species:9606 "Homo sapiens" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR007529
Pfam:PF04438 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
EMBL:AL445483 UniGene:Hs.497332 HGNC:HGNC:25360
HOGENOM:HOG000006599 HOVERGEN:HBG106120 OrthoDB:EOG4K9BBZ
EMBL:AK299219 IPI:IPI00514037 SMR:B7Z5N6 Ensembl:ENST00000367348
UCSC:uc010ppl.1 Uniprot:B7Z5N6
Length = 567
Score = 325 (119.5 bits), Expect = 1.0e-28, P = 1.0e-28
Identities = 67/209 (32%), Positives = 121/209 (57%)
Query: 48 NFDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGNDVIAQAQSGTGKTATFSISILQ 107
+F+ L E L + G+E P+ IQ + I + G D++A A +G+GKTA F + ++
Sbjct: 204 DFEHCSLPEVLNHNLKKSGYEVPTPIQMQMIPVGLLGRDILASADTGSGKTAAFLLPVIM 263
Query: 108 QVDQNIKECQALILAPTRELAQQIQKVVIAL-GDFMSVSCHACIGGTIVRDDIRKLEAGA 166
+ K ALIL PTRELA QI++ L + +GG + + +L+
Sbjct: 264 RALFESKTPSALILTPTRELAIQIERQAKELMSGLPRMKTVLLVGGLPLPPQLYRLQQHV 323
Query: 167 QVVVGTPGRVFDMISRGALSTKQIRMFVLDEADEMLSRGFKDQIYDVFKHLNNDVQVILL 226
+V++ TPGR+ D+I + ++ +++ V+DEAD ML GF+ Q+ D+ +++ ND Q IL+
Sbjct: 324 KVIIATPGRLLDIIKQSSVELCGVKIVVVDEADTMLKMGFQQQVLDILENIPNDCQTILV 383
Query: 227 SATMPADVLDVSMKFMRDPIKILVKKEEL 255
SAT+P + ++ + + +P++I+ ++ L
Sbjct: 384 SATIPTSIEQLASQLLHNPVRIITGEKNL 412
>SGD|S000002242 [details] [associations]
symbol:SUB2 "Component of the TREX complex required for
nuclear mRNA export" species:4932 "Saccharomyces cerevisiae"
[GO:0006406 "mRNA export from nucleus" evidence=IMP;IDA;IPI]
[GO:0000346 "transcription export complex" evidence=IPI]
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0005681 "spliceosomal
complex" evidence=IEA;TAS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IGI;ISA] [GO:0006283 "transcription-coupled
nucleotide-excision repair" evidence=IMP] [GO:0006368
"transcription elongation from RNA polymerase II promoter"
evidence=IMP] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IMP] [GO:0006348 "chromatin silencing at telomere"
evidence=IMP] [GO:0000781 "chromosome, telomeric region"
evidence=IPI] [GO:0051028 "mRNA transport" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0031124 "mRNA 3'-end processing" evidence=IMP]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 SGD:S000002242 GO:GO:0005524
EMBL:BK006938 GO:GO:0005681 GO:GO:0003723 GO:GO:0006348
GO:GO:0006368 GO:GO:0006406 GO:GO:0000398 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0000781 GO:GO:0004004
GO:GO:0006283 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0031124
GeneTree:ENSGT00660000095549 KO:K12812 GO:GO:0000346
OrthoDB:EOG4H49C6 EMBL:Z74132 EMBL:AY692907 PIR:S67620
RefSeq:NP_010199.1 ProteinModelPortal:Q07478 SMR:Q07478
DIP:DIP-5343N IntAct:Q07478 MINT:MINT-526164 STRING:Q07478
PaxDb:Q07478 PeptideAtlas:Q07478 EnsemblFungi:YDL084W GeneID:851475
KEGG:sce:YDL084W CYGD:YDL084w OMA:NNPLINC NextBio:968777
Genevestigator:Q07478 GermOnline:YDL084W Uniprot:Q07478
Length = 446
Score = 319 (117.4 bits), Expect = 1.2e-28, P = 1.2e-28
Identities = 72/215 (33%), Positives = 116/215 (53%)
Query: 49 FDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGNDVIAQAQSGTGKTATFSISILQQ 108
F D L EL R I GFE PS +QQ I + G DV+ QA+SG GKTA F +S LQQ
Sbjct: 64 FKDFLLKPELSRAIIDCGFEHPSEVQQHTIPQSIHGTDVLCQAKSGLGKTAVFVLSTLQQ 123
Query: 109 VDQNIKECQALILAPTRELAQQIQKVVIALGDFM-SVSCHACIGGTIVRDD---IRKLEA 164
+D E +++ RELA QI+ + +M V GGT + D ++ +
Sbjct: 124 LDPVPGEVAVVVICNARELAYQIRNEYLRFSKYMPDVKTAVFYGGTPISKDAELLKNKDT 183
Query: 165 GAQVVVGTPGRVFDMISRGALSTKQIRMFVLDEADEMLSR-GFKDQIYDVFKHLNNDVQV 223
+VV TPGR+ ++ + ++ FV+DE D++L + + ++F+ D QV
Sbjct: 184 APHIVVATPGRLKALVREKYIDLSHVKNFVIDECDKVLEELDMRRDVQEIFRATPRDKQV 243
Query: 224 ILLSATMPADVLDVSMKFMRDPIKILVKKE-ELTL 257
++ SAT+ ++ + +F+++P++I V E +LTL
Sbjct: 244 MMFSATLSQEIRPICRRFLQNPLEIFVDDEAKLTL 278
>FB|FBgn0036104 [details] [associations]
symbol:CG6418 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:AE014296 GO:GO:0006200
GO:GO:0003676 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HSSP:Q58083 KO:K12835 OMA:QGVNNTA
GeneTree:ENSGT00610000086076 EMBL:AY061400 RefSeq:NP_648413.1
UniGene:Dm.922 SMR:Q9VTC1 IntAct:Q9VTC1 MINT:MINT-311970
STRING:Q9VTC1 EnsemblMetazoa:FBtr0076274 GeneID:39218
KEGG:dme:Dmel_CG6418 UCSC:CG6418-RB FlyBase:FBgn0036104
InParanoid:Q9VTC1 OrthoDB:EOG4KKWJ0 ChiTaRS:CG6418 GenomeRNAi:39218
NextBio:812543 Uniprot:Q9VTC1
Length = 791
Score = 306 (112.8 bits), Expect = 1.2e-28, Sum P(2) = 1.2e-28
Identities = 68/207 (32%), Positives = 113/207 (54%)
Query: 48 NFDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGNDVIAQAQSGTGKTATFSISILQ 107
+F E+L++ + + +P+ IQ +A+ + G D+I A++G+GKTA F +L
Sbjct: 270 SFGHFGFDEQLIKAVRKAEYTQPTPIQAQAVPTALSGRDIIGIAKTGSGKTAAFIWPMLM 329
Query: 108 QV-DQN-IKECQA---LILAPTRELAQQIQKVVIALGDFMSVSCHACIGGTIVRDDIRKL 162
V DQ +K LILAPTREL+ QI G +++ C GG + + L
Sbjct: 330 HVMDQKQLKPGDGPIGLILAPTRELSLQIYNEAKKFGKVYNLNVVCCYGGGSKWEQSKAL 389
Query: 163 EAGAQVVVGTPGRVFDMISRGALSTKQIRMFVLDEADEMLSRGFKDQIYDVFKHLNNDVQ 222
E GA+++V TPGR+ DM+ A + +++ VLDEAD M GF+ Q+ + H+ D Q
Sbjct: 390 EQGAEIIVATPGRMIDMVKMKATNLRRVTFLVLDEADRMFHMGFEPQVRSICNHVRPDRQ 449
Query: 223 VILLSATMPADVLDVSMKFMRDPIKIL 249
++ SAT + ++ + DP++I+
Sbjct: 450 CLMFSATFKKRIERLARDVLSDPVRIV 476
Score = 48 (22.0 bits), Expect = 1.2e-28, Sum P(2) = 1.2e-28
Identities = 17/56 (30%), Positives = 26/56 (46%)
Query: 7 DNWEDPKNGPAENEAEQPAYNGPPGMAVDGLIETNWDHVAENFDDMELSEELLRGI 62
D++ D + P E E EQ AY PG G T+ ++ D + E+ + GI
Sbjct: 90 DDYFDDDDEPREKEIEQ-AYIPAPGSP--GAPPTSAKKQEDSDSDEDPLEQFMAGI 142
>UNIPROTKB|A1A4H6 [details] [associations]
symbol:DDX27 "Probable ATP-dependent RNA helicase DDX27"
species:9913 "Bos taurus" [GO:0005634 "nucleus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
EMBL:BC126497 IPI:IPI00734460 RefSeq:NP_001073740.1 UniGene:Bt.2644
ProteinModelPortal:A1A4H6 PRIDE:A1A4H6 Ensembl:ENSBTAT00000057089
GeneID:514567 KEGG:bta:514567 CTD:55661
GeneTree:ENSGT00550000074997 HOGENOM:HOG000265456
HOVERGEN:HBG106162 KO:K13181 OMA:TRTFTDH NextBio:20871404
Uniprot:A1A4H6
Length = 765
Score = 328 (120.5 bits), Expect = 1.2e-28, P = 1.2e-28
Identities = 72/208 (34%), Positives = 121/208 (58%)
Query: 48 NFDDMELSEELLRGIYAYGFEKPSAIQQRAIIPC-VRGNDVIAQAQSGTGKTATFSISIL 106
+F DM LS LL+ I A GF++P+ IQ +A IP + G D+ A A +GTGKTA F++ +L
Sbjct: 188 SFQDMNLSRPLLKAITAMGFKQPTPIQ-KACIPVGLLGKDICACAATGTGKTAAFALPVL 246
Query: 107 QQVDQNIKEC---QALILAPTRELAQQIQKVVIALGDFMSVSCHACIGGTIVRDDIRKLE 163
+++ ++ + L+L PTREL Q+ V L F S++ +GG V+ L
Sbjct: 247 ERLIYKPRQAPVTRVLVLVPTRELGIQVHSVTKQLAQFCSITTCLAVGGLDVKSQEAALR 306
Query: 164 AGAQVVVGTPGRVFDMISR-GALSTKQIRMFVLDEADEMLSRGFKDQIYDVFKHLNNDVQ 222
A +++ TPGR+ D + + I + +LDEAD ML F++Q+ ++ + ++ Q
Sbjct: 307 AAPDILIATPGRLIDHLHNCPSFHLSSIEVLILDEADRMLDEYFEEQMKEIIRMCSHHRQ 366
Query: 223 VILLSATMPADVLDVSMKFMRDPIKILV 250
+L SATM +V D++ +++P++I V
Sbjct: 367 TMLFSATMTDEVKDLASVSLKNPVRIFV 394
>TIGR_CMR|SO_3783 [details] [associations]
symbol:SO_3783 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:AE014299
GenomeReviews:AE014299_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
HSSP:Q58083 HOGENOM:HOG000268807 KO:K11927 OMA:HLIKQHN
RefSeq:NP_719320.1 ProteinModelPortal:Q8EAV8 GeneID:1171430
KEGG:son:SO_3783 PATRIC:23527244 ProtClustDB:CLSK2393932
Uniprot:Q8EAV8
Length = 535
Score = 323 (118.8 bits), Expect = 1.3e-28, P = 1.3e-28
Identities = 72/207 (34%), Positives = 116/207 (56%)
Query: 48 NFDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGNDVIAQAQSGTGKTATFSISILQ 107
+F + LS L + + G++ PS IQ +AI + G DV+A AQ+GTGKTA F++ +L+
Sbjct: 2 SFSALGLSAPLQKAVSEQGYDTPSPIQAQAIPAVLTGKDVMAAAQTGTGKTAGFTLPLLE 61
Query: 108 QVDQNIK----ECQALILAPTRELAQQIQKVVIALGDFMSVSCHACIGGTIVRDDIRKLE 163
+ + K + +AL+L PTRELA Q+ + V G ++ + GG + I KL
Sbjct: 62 LLAKGHKAKSGQTRALVLTPTRELAAQVGESVETYGKYLPLRSAVVFGGVPINPQINKLR 121
Query: 164 AGAQVVVGTPGRVFDMISRGALSTKQIRMFVLDEADEMLSRGFKDQIYDVFKHLNNDVQV 223
G V+V TPGR+ D++ + A+ Q+ + VLDEAD ML GF I + L Q
Sbjct: 122 HGVDVLVATPGRLLDLVQQNAVKFNQLEILVLDEADRMLDMGFIRDIKKILALLPAKRQN 181
Query: 224 ILLSATMPADVLDVSMKFMRDPIKILV 250
++ SAT ++ +++ + P++I V
Sbjct: 182 LMFSATFSDEIRELAKGLVNHPVEISV 208
>UNIPROTKB|Q5T1V6 [details] [associations]
symbol:DDX59 "Probable ATP-dependent RNA helicase DDX59"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0005622 "intracellular" evidence=IDA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0046872
GO:GO:0003723 GO:GO:0005622 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR007529 Pfam:PF04438 PROSITE:PS51083
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
EMBL:AL136611 EMBL:AL445483 EMBL:BC014183 EMBL:BC041801
IPI:IPI00010449 IPI:IPI00217157 RefSeq:NP_001026895.2
UniGene:Hs.497332 PDB:2YQP PDBsum:2YQP ProteinModelPortal:Q5T1V6
SMR:Q5T1V6 PhosphoSite:Q5T1V6 DMDM:74762230 PaxDb:Q5T1V6
PRIDE:Q5T1V6 DNASU:83479 Ensembl:ENST00000331314
Ensembl:ENST00000447706 GeneID:83479 KEGG:hsa:83479 UCSC:uc009wzk.3
CTD:83479 GeneCards:GC01M200594 HGNC:HGNC:25360 HPA:HPA047166
neXtProt:NX_Q5T1V6 PharmGKB:PA142672000 HOGENOM:HOG000006599
HOVERGEN:HBG106120 InParanoid:Q5T1V6 OMA:VTRPIID PhylomeDB:Q5T1V6
EvolutionaryTrace:Q5T1V6 GenomeRNAi:83479 NextBio:72419
ArrayExpress:Q5T1V6 Bgee:Q5T1V6 CleanEx:HS_DDX59
Genevestigator:Q5T1V6 Uniprot:Q5T1V6
Length = 619
Score = 325 (119.5 bits), Expect = 1.4e-28, P = 1.4e-28
Identities = 67/209 (32%), Positives = 121/209 (57%)
Query: 48 NFDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGNDVIAQAQSGTGKTATFSISILQ 107
+F+ L E L + G+E P+ IQ + I + G D++A A +G+GKTA F + ++
Sbjct: 204 DFEHCSLPEVLNHNLKKSGYEVPTPIQMQMIPVGLLGRDILASADTGSGKTAAFLLPVIM 263
Query: 108 QVDQNIKECQALILAPTRELAQQIQKVVIAL-GDFMSVSCHACIGGTIVRDDIRKLEAGA 166
+ K ALIL PTRELA QI++ L + +GG + + +L+
Sbjct: 264 RALFESKTPSALILTPTRELAIQIERQAKELMSGLPRMKTVLLVGGLPLPPQLYRLQQHV 323
Query: 167 QVVVGTPGRVFDMISRGALSTKQIRMFVLDEADEMLSRGFKDQIYDVFKHLNNDVQVILL 226
+V++ TPGR+ D+I + ++ +++ V+DEAD ML GF+ Q+ D+ +++ ND Q IL+
Sbjct: 324 KVIIATPGRLLDIIKQSSVELCGVKIVVVDEADTMLKMGFQQQVLDILENIPNDCQTILV 383
Query: 227 SATMPADVLDVSMKFMRDPIKILVKKEEL 255
SAT+P + ++ + + +P++I+ ++ L
Sbjct: 384 SATIPTSIEQLASQLLHNPVRIITGEKNL 412
>WB|WBGene00022148 [details] [associations]
symbol:Y71G12B.8 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00550000074997 EMBL:FO080942 RefSeq:NP_490891.2
ProteinModelPortal:Q95XM9 SMR:Q95XM9 PaxDb:Q95XM9
EnsemblMetazoa:Y71G12B.8 GeneID:171743 KEGG:cel:CELE_Y71G12B.8
UCSC:Y71G12B.8 CTD:171743 WormBase:Y71G12B.8 InParanoid:Q95XM9
OMA:ETDREAM NextBio:872509 Uniprot:Q95XM9
Length = 739
Score = 327 (120.2 bits), Expect = 1.5e-28, P = 1.5e-28
Identities = 82/255 (32%), Positives = 135/255 (52%)
Query: 3 EQRGDNWEDPKNGPAENEAEQPAYNGPPGMAVDGL-IETNWDHVAENFDDMELSEELLRG 61
E R E K+G ++ E + +DG ++T+ V +F+ M LS ++L+
Sbjct: 109 ETRDTVREKRKSGKSKKSQENEDFFSA---LIDGKSLDTS---VNVSFEQMNLSRQILKA 162
Query: 62 IYAYGFEKPSAIQQRAIIPCVRGNDVIAQAQSGTGKTATFSISILQQVDQNIK--EC-QA 118
G+ P+ IQQ I + G D+ A A +GTGKTA F + IL+++ K C +
Sbjct: 163 CSGAGYSDPTPIQQACIPVALTGKDICACAATGTGKTAAFVLPILERMIYRPKGASCTRV 222
Query: 119 LILAPTRELAQQIQKVVIALGDFMSVSCHACIGGTIVRDDIRKLEAGAQVVVGTPGRVFD 178
L+L PTRELA Q+ +V L F+ + C GG ++ L +G VVV TPGR+ D
Sbjct: 223 LVLVPTRELAIQVFQVFRKLSTFIQLEVCLCAGGLDLKAQEAALRSGPDVVVATPGRLID 282
Query: 179 MISRG-ALSTKQIRMFVLDEADEMLSRGFKDQIYDVFKHLNNDVQVILLSATMPADVLDV 237
+ + + I + VLDEAD ML F+DQ+ ++ + + Q +L SATM ++ ++
Sbjct: 283 HLHNSPSFNLSNIEVLVLDEADRMLEEAFRDQMNELIRLCAQNRQTLLFSATMTEEIDEL 342
Query: 238 SMKFMRDPIKILVKK 252
+ ++ P+KI + +
Sbjct: 343 ASMSLQKPVKIFINE 357
>POMBASE|SPAC17G6.14c [details] [associations]
symbol:uap56 "ATP-dependent RNA helicase Uap56"
species:4896 "Schizosaccharomyces pombe" [GO:0000346 "transcription
export complex" evidence=ISO] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IGI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005681 "spliceosomal complex" evidence=ISO]
[GO:0006406 "mRNA export from nucleus" evidence=ISO] [GO:0008380
"RNA splicing" evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 PomBase:SPAC17G6.14c GO:GO:0005524 EMBL:CU329670
GO:GO:0008380 GenomeReviews:CU329670_GR GO:GO:0006397 GO:GO:0005681
GO:GO:0003723 GO:GO:0006406 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 KO:K12812 GO:GO:0000346
OrthoDB:EOG4H49C6 EMBL:D89270 PIR:T37846 PIR:T43199
RefSeq:NP_594261.1 ProteinModelPortal:O13792 SMR:O13792
STRING:O13792 EnsemblFungi:SPAC17G6.14c.1 GeneID:2542433
KEGG:spo:SPAC17G6.14c OMA:DAVEFNQ NextBio:20803490 Uniprot:O13792
Length = 434
Score = 318 (117.0 bits), Expect = 1.5e-28, P = 1.5e-28
Identities = 79/215 (36%), Positives = 118/215 (54%)
Query: 49 FDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGNDVIAQAQSGTGKTATFSISILQQ 108
F D L ELLR I GFE PS +QQ I + G DV+ QA+SG GKTA F +S LQQ
Sbjct: 53 FRDFLLKPELLRAITDSGFEHPSEVQQVCIPQSILGTDVLCQAKSGMGKTAVFVLSTLQQ 112
Query: 109 VDQNIKECQALILAPTRELAQQIQKVVIALGDFM-SVSCHACIGGTIVRDDIRKLEAGAQ 167
++ E L+L TRELA QI+ ++ V GG ++ D+ + ++
Sbjct: 113 IEPVDGEVSVLVLCHTRELAFQIKNEYARFSKYLPDVRTAVFYGGINIKQDMEAFKDKSK 172
Query: 168 ---VVVGTPGRVFDMISRGALSTKQIRMFVLDEADEML-SRGFKDQIYDVFKHLNNDVQV 223
+VV TPGR+ ++ L ++ FVLDE D++L S + I +VF+ QV
Sbjct: 173 SPHIVVATPGRLNALVREKILKVNSVKHFVLDECDKLLESVDMRRDIQEVFRATPPQKQV 232
Query: 224 ILLSATMPADVLDVSMKFMRDPIKILVKKE-ELTL 257
++ SAT+ ++ + KFM++P++I V E +LTL
Sbjct: 233 MMFSATLSNEIRPICKKFMQNPLEIYVDDETKLTL 267
>UNIPROTKB|E2R4Z9 [details] [associations]
symbol:DDX59 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR007529 Pfam:PF04438
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 EMBL:AAEX03005031
Ensembl:ENSCAFT00000017691 Uniprot:E2R4Z9
Length = 569
Score = 323 (118.8 bits), Expect = 1.7e-28, P = 1.7e-28
Identities = 69/209 (33%), Positives = 118/209 (56%)
Query: 48 NFDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGNDVIAQAQSGTGKTATFSISILQ 107
+F+ E L + G+E P+ IQ + I + G DV+A A +G+GKTA F + ++
Sbjct: 205 DFEHCGFPEALNHNLKTSGYEVPTPIQMQMIPVGLLGRDVLASADTGSGKTAAFLLPVIT 264
Query: 108 QVDQNIKECQALILAPTRELAQQIQKVVIAL-GDFMSVSCHACIGGTIVRDDIRKLEAGA 166
+ K ALIL PTRELA QI+ L + +GG + + +L
Sbjct: 265 RALCESKTPSALILTPTRELAIQIENQAKELMSGLPRMKTVLLVGGLPLPPQLYRLRQHV 324
Query: 167 QVVVGTPGRVFDMISRGALSTKQIRMFVLDEADEMLSRGFKDQIYDVFKHLNNDVQVILL 226
+V++ TPGR+ D+I + ++ I++ V+DEAD ML GF+ Q+ D+ +H+ ND Q IL+
Sbjct: 325 KVIIATPGRLLDIIKQSSVELCGIKIVVVDEADTMLKMGFQQQVLDILEHVPNDSQTILV 384
Query: 227 SATMPADVLDVSMKFMRDPIKILVKKEEL 255
SAT+P + ++ + + +P++I+ ++ L
Sbjct: 385 SATIPTSIEQLASQLLHNPVRIITGEKNL 413
>FB|FBgn0035720 [details] [associations]
symbol:CG10077 species:7227 "Drosophila melanogaster"
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005875 "microtubule associated complex"
evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005875
EMBL:AE014296 GO:GO:0006200 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0016779 KO:K12823
GeneTree:ENSGT00660000095174 HSSP:P10081 UniGene:Dm.7301
GeneID:38756 KEGG:dme:Dmel_CG10077 FlyBase:FBgn0035720
ChiTaRS:CG10077 GenomeRNAi:38756 NextBio:810234 EMBL:AY102660
RefSeq:NP_648062.2 SMR:Q8MZI3 IntAct:Q8MZI3 MINT:MINT-863686
STRING:Q8MZI3 EnsemblMetazoa:FBtr0076940 EnsemblMetazoa:FBtr0333083
UCSC:CG10077-RA InParanoid:Q8MZI3 OMA:WRACAIH Uniprot:Q8MZI3
Length = 818
Score = 327 (120.2 bits), Expect = 1.8e-28, P = 1.8e-28
Identities = 75/206 (36%), Positives = 117/206 (56%)
Query: 49 FDDMELSEELLRGIYAYGFEKPSAIQQRAIIPCVRGNDVIAQAQSGTGKTATFSISILQQ 108
F++ + ++ I GF KP+AIQ + + G D++ AQ+G+GKT + + +
Sbjct: 159 FEEGGFPDYVMNEIRKQGFAKPTAIQAQGWPIAMSGRDLVGVAQTGSGKTLAYVLPAVVH 218
Query: 109 VDQNIKECQ-----ALILAPTRELAQQIQKVVIALGDFMSVSCHACI-GGTIVRDDIRKL 162
++ + + AL+LAPTRELAQQIQ+V I G V + CI GG R L
Sbjct: 219 INNQPRLERGDGPIALVLAPTRELAQQIQQVAIEFGSNTHVR-NTCIFGGAPKGQQARDL 277
Query: 163 EAGAQVVVGTPGRVFDMISRGALSTKQIRMFVLDEADEMLSRGFKDQIYDVFKHLNNDVQ 222
E G ++V+ TPGR+ D + RG S K+ VLDEAD ML GF+ QI + + + D Q
Sbjct: 278 ERGVEIVIATPGRLIDFLERGTTSLKRCTYLVLDEADRMLDMGFEPQIRKIMQQIRPDRQ 337
Query: 223 VILLSATMPADVLDVSMKFMRDPIKI 248
V++ SAT P +V ++ +F+ + I++
Sbjct: 338 VLMWSATWPKEVRQLAEEFLNNYIQV 363
WARNING: HSPs involving 602 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.135 0.388 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 258 258 0.00087 114 3 11 22 0.46 33
32 0.48 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 852
No. of states in DFA: 598 (64 KB)
Total size of DFA: 183 KB (2105 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:06
No. of threads or processors used: 24
Search cpu time: 23.20u 0.07s 23.27t Elapsed: 00:00:23
Total cpu time: 23.24u 0.08s 23.32t Elapsed: 00:00:31
Start: Thu Aug 15 14:36:25 2013 End: Thu Aug 15 14:36:56 2013
WARNINGS ISSUED: 2