Query psy47
Match_columns 1001
No_of_seqs 476 out of 1622
Neff 4.7
Searched_HMMs 46136
Date Fri Aug 16 23:36:13 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy47.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/47hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PTZ00310 AMP deaminase; Provis 100.0 2E-182 5E-187 1650.9 52.1 765 111-951 61-1253(1453)
2 KOG1096|consensus 100.0 9E-161 2E-165 1365.4 38.1 459 482-952 249-731 (768)
3 TIGR01429 AMP_deaminase AMP de 100.0 5E-135 1E-139 1176.4 40.9 458 482-951 101-582 (611)
4 PLN02768 AMP deaminase 100.0 4E-134 8E-139 1180.1 37.7 455 484-951 315-793 (835)
5 PLN03055 AMP deaminase; Provis 100.0 7E-128 1E-132 1114.2 35.8 455 484-951 82-560 (602)
6 cd01319 AMPD AMP deaminase (AM 100.0 1E-126 3E-131 1092.3 32.4 446 493-951 1-470 (496)
7 PTZ00310 AMP deaminase; Provis 100.0 2E-110 4E-115 1021.4 33.5 440 488-947 143-620 (1453)
8 KOG1096|consensus 100.0 2.2E-82 4.8E-87 723.7 11.0 434 45-497 44-547 (768)
9 PLN03055 AMP deaminase; Provis 100.0 5E-75 1.1E-79 673.9 18.6 307 128-472 3-359 (602)
10 PLN02768 AMP deaminase 100.0 4E-73 8.7E-78 666.2 16.2 321 112-472 222-592 (835)
11 TIGR01429 AMP_deaminase AMP de 100.0 2E-73 4.3E-78 662.4 13.0 331 131-478 1-384 (611)
12 cd01319 AMPD AMP deaminase (AM 100.0 1E-70 2.2E-75 631.3 11.5 231 229-472 3-269 (496)
13 PF00962 A_deaminase: Adenosin 100.0 1.9E-45 4.2E-50 403.6 18.7 297 554-944 1-331 (331)
14 cd00443 ADA_AMPD Adenosine/AMP 100.0 3.3E-44 7.1E-49 393.1 24.4 265 555-944 1-304 (305)
15 PTZ00124 adenosine deaminase; 100.0 1.8E-43 3.8E-48 396.0 22.5 294 550-944 29-360 (362)
16 COG1816 Add Adenosine deaminas 100.0 1.4E-42 3.1E-47 384.3 20.0 297 554-947 10-339 (345)
17 cd01321 ADGF Adenosine deamina 100.0 3.9E-42 8.5E-47 383.3 23.6 274 550-944 18-340 (345)
18 KOG1097|consensus 100.0 8.5E-40 1.8E-44 363.5 22.4 295 556-944 48-382 (399)
19 TIGR01431 adm_rel adenosine de 100.0 9.9E-36 2.1E-40 343.9 25.0 244 645-944 177-466 (479)
20 PRK09358 adenosine deaminase; 100.0 2E-34 4.3E-39 318.9 24.5 296 551-944 5-333 (340)
21 TIGR01430 aden_deam adenosine 100.0 3.2E-32 6.9E-37 299.5 24.1 288 555-943 1-322 (324)
22 cd01320 ADA Adenosine deaminas 100.0 2.7E-30 5.7E-35 283.7 26.1 292 554-943 1-323 (325)
23 TIGR01224 hutI imidazoloneprop 98.9 5.5E-08 1.2E-12 109.3 19.8 223 657-936 88-335 (377)
24 COG1816 Add Adenosine deaminas 98.8 8.5E-10 1.8E-14 124.1 0.8 138 314-453 2-139 (345)
25 cd01296 Imidazolone-5PH Imidaz 98.8 4E-07 8.6E-12 102.1 19.3 220 659-936 87-331 (371)
26 PRK09230 cytosine deaminase; P 98.6 1.5E-06 3.1E-11 100.8 18.1 222 655-935 93-364 (426)
27 cd01292 metallo-dependent_hydr 98.5 6.7E-06 1.5E-10 85.3 19.4 219 655-929 26-273 (275)
28 cd01305 archeal_chlorohydrolas 98.2 2.3E-06 5E-11 92.2 8.2 105 802-925 127-256 (263)
29 PRK07213 chlorohydrolase; Prov 98.2 3.8E-06 8.2E-11 95.5 9.2 119 798-935 177-326 (375)
30 cd01293 Bact_CD Bacterial cyto 97.8 0.00079 1.7E-08 75.7 17.5 221 656-934 88-357 (398)
31 PRK06886 hypothetical protein; 97.5 0.0008 1.7E-08 76.2 11.6 124 797-934 159-327 (329)
32 PRK09356 imidazolonepropionase 97.4 0.00041 8.9E-09 79.2 9.3 124 797-936 219-361 (406)
33 PRK06687 chlorohydrolase; Vali 97.4 0.00054 1.2E-08 79.0 9.4 120 799-936 195-355 (419)
34 cd01312 Met_dep_hydrolase_D Me 97.3 0.00058 1.3E-08 78.3 8.9 85 844-934 245-335 (381)
35 cd01298 ATZ_TRZ_like TRZ/ATZ f 97.3 0.00092 2E-08 75.6 9.5 120 798-935 192-352 (411)
36 cd01303 GDEase Guanine deamina 97.1 0.002 4.3E-08 74.9 10.4 119 799-936 207-372 (429)
37 TIGR02967 guan_deamin guanine 97.1 0.002 4.3E-08 73.8 9.4 120 798-936 184-344 (401)
38 PRK09228 guanine deaminase; Pr 97.0 0.0038 8.2E-08 72.8 10.9 120 798-936 209-369 (433)
39 PRK09045 N-ethylammeline chlor 97.0 0.0026 5.7E-08 74.0 9.6 120 799-936 201-361 (443)
40 PRK12393 amidohydrolase; Provi 97.0 0.0033 7.1E-08 73.8 10.2 121 797-935 215-375 (457)
41 PRK15493 5-methylthioadenosine 97.0 0.0027 5.9E-08 74.0 9.4 119 799-935 196-355 (435)
42 PRK14085 imidazolonepropionase 96.9 0.0026 5.7E-08 72.6 8.9 120 799-935 206-344 (382)
43 TIGR03314 Se_ssnA putative sel 96.9 0.0014 3E-08 76.5 6.2 95 799-915 203-329 (441)
44 cd01313 Met_dep_hydrolase_E Me 96.9 0.0051 1.1E-07 71.3 10.5 116 798-935 205-367 (418)
45 PRK08204 hypothetical protein; 96.8 0.0043 9.4E-08 72.0 9.8 119 799-936 200-363 (449)
46 PRK08393 N-ethylammeline chlor 96.8 0.0044 9.6E-08 71.8 9.7 119 799-935 188-347 (424)
47 PRK07203 putative chlorohydrol 96.7 0.0041 8.9E-08 72.4 8.5 114 798-933 203-356 (442)
48 PRK07583 cytosine deaminase-li 96.5 0.013 2.7E-07 68.5 10.9 124 799-936 211-381 (438)
49 PRK06380 metal-dependent hydro 96.5 0.0064 1.4E-07 70.1 8.1 119 799-934 185-344 (418)
50 TIGR02022 hutF formiminoglutam 96.5 0.0077 1.7E-07 70.7 8.9 115 798-934 214-376 (455)
51 PRK06038 N-ethylammeline chlor 96.5 0.012 2.5E-07 68.6 9.9 120 798-935 188-348 (430)
52 cd01299 Met_dep_hydrolase_A Me 96.4 0.0046 1E-07 68.8 6.1 121 797-935 157-314 (342)
53 PRK08418 chlorohydrolase; Prov 96.4 0.0094 2E-07 69.1 8.4 85 844-934 268-358 (408)
54 COG0402 SsnA Cytosine deaminas 96.2 0.1 2.3E-06 60.6 15.5 85 844-934 262-355 (421)
55 PRK09229 N-formimino-L-glutama 96.1 0.016 3.4E-07 68.0 8.7 82 844-934 279-376 (456)
56 PRK08203 hydroxydechloroatrazi 96.1 0.025 5.4E-07 66.0 10.2 119 799-935 213-371 (451)
57 PRK07228 N-ethylammeline chlor 95.9 0.029 6.3E-07 65.3 9.6 121 798-936 197-358 (445)
58 PRK07572 cytosine deaminase; V 95.8 0.029 6.3E-07 65.2 8.9 122 800-935 191-360 (426)
59 cd00443 ADA_AMPD Adenosine/AMP 95.7 0.002 4.3E-08 71.9 -1.0 87 345-431 26-116 (305)
60 PRK06151 N-ethylammeline chlor 95.0 0.098 2.1E-06 62.1 9.9 117 797-935 218-384 (488)
61 cd01300 YtcJ_like YtcJ_like me 92.4 0.39 8.5E-06 56.5 8.4 122 797-936 292-464 (479)
62 cd01309 Met_dep_hydrolase_C Me 89.5 1.3 2.7E-05 50.8 8.7 86 845-936 231-321 (359)
63 KOG3968|consensus 86.8 1.7 3.8E-05 51.0 7.5 87 842-938 284-381 (439)
64 cd01306 PhnM PhnM is believed 86.6 4.4 9.5E-05 46.4 10.6 106 819-935 173-293 (325)
65 PRK05985 cytosine deaminase; P 86.0 3.4 7.3E-05 47.6 9.4 117 798-934 189-346 (391)
66 COG1228 HutI Imidazolonepropio 84.1 2.7 5.8E-05 49.5 7.6 116 803-937 223-358 (406)
67 PRK06846 putative deaminase; V 83.5 3.6 7.7E-05 47.9 8.2 103 798-920 204-342 (410)
68 PRK15446 phosphonate metabolis 75.0 18 0.0004 42.0 10.4 106 819-935 224-344 (383)
69 TIGR02318 phosphono_phnM phosp 57.0 37 0.0008 39.5 8.2 111 814-935 214-340 (376)
70 PRK12394 putative metallo-depe 52.6 85 0.0019 36.2 10.2 116 799-935 172-321 (379)
71 COG1574 Predicted metal-depend 52.3 52 0.0011 40.5 8.7 108 819-934 331-486 (535)
72 PF13147 Amidohydro_4: Amidohy 43.2 39 0.00085 35.4 5.2 80 854-935 209-289 (304)
73 PF05871 ESCRT-II: ESCRT-II co 38.1 51 0.0011 33.7 4.8 49 357-407 57-112 (139)
74 cd08538 SAM_PNT-ESE-2-like Ste 31.7 30 0.00065 32.3 1.8 47 112-158 32-78 (78)
75 PF05871 ESCRT-II: ESCRT-II co 31.7 87 0.0019 32.1 5.3 45 662-708 62-113 (139)
76 PF10516 SHNi-TPR: SHNi-TPR; 29.6 52 0.0011 26.6 2.6 22 130-151 14-35 (38)
77 TIGR00010 hydrolase, TatD fami 28.7 2.1E+02 0.0046 30.3 7.9 111 801-931 109-249 (252)
78 cd01310 TatD_DNAse TatD like p 22.8 4.3E+02 0.0094 27.8 8.9 111 801-930 109-248 (251)
No 1
>PTZ00310 AMP deaminase; Provisional
Probab=100.00 E-value=2.4e-182 Score=1650.92 Aligned_cols=765 Identities=32% Similarity=0.503 Sum_probs=680.7
Q ss_pred ccCCceeeeeccccCCCCChhhHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHhccCCCCCCCCccccccccccccc
Q psy47 111 FVPHFQRVAISGEDNTGVPAEDLEQASRLLVEALHIRDRYMDISSQTFPQVTARFLREMDNVASLPHSTKIVHEDKKTIA 190 (1001)
Q Consensus 111 ~~~~fQRV~IsGe~~~GVpleDL~~Aak~L~~AL~iRekYM~~s~q~Fp~TT~~fL~~~~~~~~~~~~~~~~~~~~~~~~ 190 (1001)
...+++||.|-||+ .|| |+..++..|..|+..|++|-.. ..+.. ++....+
T Consensus 61 ~~~~~~~v~idgdd-g~~---~~~~~~~~l~~ai~~r~~yk~~----------------d~g~~--------~g~~~~~- 111 (1453)
T PTZ00310 61 VASTMFRVVIDGDD-GGV---DMRKVHGRIAAAIRVRQLYKPT----------------DTKVP--------EGEREQP- 111 (1453)
T ss_pred cccceEEEEecCCC-cch---HHHHHHHHHHHHHHHHHhhhcc----------------CCCcC--------cCCccCc-
Confidence 36799999999998 776 8899999999999999999621 11111 0000000
Q ss_pred ccCCCCCCCCCCCC-----CCccccccccccccccccCCCCChhhHHHHHHHH--HHHHh----------hhhccccccc
Q psy47 191 DTDKHFKPSDNDSS-----TGQVAPLWRYKTISNLSNEKSVPAEDLEQASRLL--VEALH----------IRDRYMDISS 253 (1001)
Q Consensus 191 ~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~lP~~dle~~~~~~--~~al~----------ir~~y~~lss 253 (1001)
...++ +++. .+||.+++ +...+.-+| |++++|..|+ +.+++ .|++|+ .+
T Consensus 112 ----~~~~~-~~~~~~~~~~~GV~~v~------~~~~~~~~~-p~~~~F~~D~~~l~~~v~~g~~ks~c~~RL~~L--e~ 177 (1453)
T PTZ00310 112 ----SDSTP-MPSLVTIVQRDGVYRFS------GMDTSVVLP-PPWEQYVRDVQAVYLTVGNGPCLSACRHRLTII--QE 177 (1453)
T ss_pred ----cccCC-CCCceEEEEeCCEEEee------cCCcccccC-CCHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHH--HH
Confidence 00000 1111 23666663 334455567 9999999984 44432 245555 44
Q ss_pred ccchhhHHHHHhhhhccccCCCCccccCCCcccccccCCccCCCCC----------------------------CCCccc
Q psy47 254 QTFPQVTARFLREMDNVASLPHSTKIVHEDKKTIADTDKHFKPSDN----------------------------DSSTGQ 305 (1001)
Q Consensus 254 ~~f~~~~~~lLnem~El~~q~~~~~~~~~~~~~~rk~d~~~~~~~~----------------------------~~~~~~ 305 (1001)
||+ ||.+||+..|..++++ ..|+||||+||||||||.|.| .+||+|
T Consensus 178 -Kf~--L~~llN~~~E~~~~~~---~~~~dFyn~rKVDthvh~sacMnqk~LLrFIk~kl~~epd~vV~~~~Gk~~TL~e 251 (1453)
T PTZ00310 178 -RSR--MFFLLNAEIEERADLY---KAGGVFSPCTKVDNAVLLSTSVDAQELLEFVVTTYREQPRAPLRLRDGSNSTLRE 251 (1453)
T ss_pred -HHH--HHHHHchhhhhhcCcC---CCCCceeecceeecccchhccCCHHHHHHHHHHHHhcCCCcEEEcCCCccccHHH
Confidence 787 9999999999999988 899999999999999999998 359999
Q ss_pred ccc---CC-CcCCCCccccccc--CCccccccccccccCCCCCc--hhhhhhhhccCCCCCcchHHHHHHHHHHhhhhhc
Q psy47 306 VAP---LW-RYKTISNLSNEKS--DRNTFHRFDKFNAKYNPIGE--SRLREVFLKTDNYLGGTYFARIIKEVAADLEESK 377 (1001)
Q Consensus 306 ~~~---~~-~~~~~~d~l~~~a--~~~~f~rfd~fn~kynp~g~--~~lr~iflk~dn~i~G~y~Ae~~k~v~~~le~sk 377 (1001)
||+ ++ +|+||||+||||| |+|||||||+||+| ||+|+ ++||+||||| +|+|||+|||+||+++|+||
T Consensus 252 vFesl~lt~~~dLTVd~Ldvha~~drntfhrFDkFn~K-NP~G~~~s~LReiFLkT----~G~y~a~liK~vi~~lE~sK 326 (1453)
T PTZ00310 252 YLEAHGVRDPRELTVEGLGWQPTKYRNKYGQYDLFDAK-NPMGALGAELRQSFLSL----HGNLCGKLLRRELERREYQK 326 (1453)
T ss_pred HHHhcCCCCccccchhhcCCcccccccccccccccccc-CCCccchhHHHHHHHhc----CcHHHHHHHHHHHHHHHhcc
Confidence 995 54 7999999999999 99999999999999 99999 9999999999 69999999999999999999
Q ss_pred cc--cceeeeeeecCChhHHHHHhhhHhhCcccC-CCceeeeccCceeeeccc------cchhhhHHHHHHhhccccccc
Q psy47 378 YQ--NAELRLSIYGKSEDEWDKLATWAIESNVYS-NNIRWLIQIPRLYDIFKS------NKLINNFQEILQNIFKPLFEV 448 (1001)
Q Consensus 378 yq--~~e~r~siyg~~~~eW~~la~W~~~~~~~s-~n~rW~iqiprly~~~~~------~~~v~~F~~~l~niF~Plfe~ 448 (1001)
|| ++||||||||++++||++||+|+++|+|+| +||||+||| +|++ +|.|+|||+||+|||.|||||
T Consensus 327 yQ~q~~E~rlSIYGr~~~EW~kLA~Wvv~~~l~s~~nvRWlIQI-----vyk~~~~~~~~~~v~nFqd~LdNIF~PLFea 401 (1453)
T PTZ00310 327 QQPQATEYSLPLYGHHPEELTDLAEWVRRQGFGPFSRNRWILAI-----SFKELGPFQVPSSCTTVQDQLDNIFLPLFKA 401 (1453)
T ss_pred ccceeeEEEEEEeCCChhHHHHHHHHHHHCCCCccCCceEEEEE-----EEeccccccccccccCHHHHHHHHHHHHHHH
Confidence 97 699999999999999999999999999997 699999999 5555 447999999999999999999
Q ss_pred cccCCcccccchhHHHHHHHHhh---------------------------------------------------------
Q psy47 449 DTHIHAASCMNQKHLLRFIKKTL--------------------------------------------------------- 471 (1001)
Q Consensus 449 ~~~~h~~~~m~~~~l~~f~~~~~--------------------------------------------------------- 471 (1001)
|++|+.. +||+|+.||+++.
T Consensus 402 Tl~P~~~---~~p~L~~FLq~V~GfDvvdde~~~~~~f~~~~p~P~~w~~~~NPPyaYY~YYmyANl~~LN~lR~~RGlN 478 (1453)
T PTZ00310 402 TLCPSDP---QWSDVAWLLCQVGGLQILTHAVVRSEDFDETAPDPDQVPYTAKCSDLYYFYYVYANLAVLNSLRKRKGLN 478 (1453)
T ss_pred hcCcCcC---CCHHHHHHHHhcCceeecCCCcccccccCCCCCCcccccCCCCCChhhhHHHHHHHHHHHHHHHHhCCCC
Confidence 9998832 4799999999987
Q ss_pred --------------------------------------------------------------------------------
Q psy47 472 -------------------------------------------------------------------------------- 471 (1001)
Q Consensus 472 -------------------------------------------------------------------------------- 471 (1001)
T Consensus 479 Tf~LRPhcgeag~~dhLv~~fLladRI~HGi~l~d~p~LqyL~~e~qI~LeVCPlSN~~l~v~sy~~HPi~~fl~~GL~V 558 (1453)
T PTZ00310 479 TLQLRPSGEKAPAYDQLISSYLLGDVITRATSIADYPVLQYLCGLHRVGLTVSPLRDHALSITAYFDHPLPKFLHRCLRV 558 (1453)
T ss_pred eEEecCCCCCCCCHHHHHHHHHhhccccchhccCchHHHHHHHHHcCCeEEECCCcccccCCCchhhCcHHHHHHCCCEE
Confidence
Q ss_pred --------------------------------------------------------------------------------
Q psy47 472 -------------------------------------------------------------------------------- 471 (1001)
Q Consensus 472 -------------------------------------------------------------------------------- 471 (1001)
T Consensus 559 SLNTDDPl~F~tt~EpL~EEY~iaaq~~gLS~~DL~eLarNSV~aSf~~~e~K~~lLg~l~~~g~~gNd~~ktnVp~iR~ 638 (1453)
T PTZ00310 559 SISTSDPLYFHHHSQPLIEEYATAMKLFSLSPLDTTELARNSVLNSSFPPEVKQQWLGERFQLGVEGNDFERSGVTNYRL 638 (1453)
T ss_pred EECCCCccccCCCCccHHHHHHHHHHHhCcCHHHHHHHHHHHHHHhCCCHHHHHHHHHHhcccCCCCCcccccCCChHHH
Confidence
Q ss_pred ------------------cc-C---------------------Cccccc-------------------------------
Q psy47 472 ------------------KN-H---------------------TDEVVT------------------------------- 480 (1001)
Q Consensus 472 ------------------~~-~---------------------~de~v~------------------------------- 480 (1001)
.+ . .+.+++
T Consensus 639 ~fR~etL~~El~ll~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~lD~~~~fPR~I~~gp~~~~~~~~~~~~l~~~~~ 718 (1453)
T PTZ00310 639 AFREEAWALEEALLNDLLLNVPSGDSGAGPSRWHYISNVQEVEYDTVLDQRVRFPRTVLYGPHKSGKAVTAAPALARALD 718 (1453)
T ss_pred HHHHHHHHHHHHHHHHhhhccccccccCCccccccccccccccccccccccccCceEEecCCcccchHHHHHHHHHHHHH
Confidence 11 0 000000
Q ss_pred ----------------------c--------------------------------CCCCCCCCHHHHhhhccccccchhh
Q psy47 481 ----------------------K--------------------------------DRTGQTMTLRQVFQSMNLTSYDLTV 506 (1001)
Q Consensus 481 ----------------------~--------------------------------~~~~~~pt~~ef~~D~~~~~~dl~v 506 (1001)
. .++..+||+++|+.|++.
T Consensus 719 lr~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dgv~~~~~~~~~~~~~~~~p~~~~f~~D~~~------- 791 (1453)
T PTZ00310 719 LRHKYIWNPPPPWETTQRNVVEEDFQRTTRQFNEDQWTYAAYDGVFILSPKGAVHAWPRFLPTLTEFIRDLSE------- 791 (1453)
T ss_pred HHHHhhcCCCCccccccccccccccccccCCCCCCceeEeccCcEEEEeeCCcccccccCCCCHHHHHHHHHH-------
Confidence 0 011347999999999999
Q ss_pred hhHHhhcCcc----hHHHHHHHHhhcCc-cccChhhhhccccccccCcccccccccccccccccCCCCHHHHHHHHHHHh
Q psy47 507 DMLDVHADRN----TFHRFDKFNAKYNP-IGESRLREVFLKTDNYLGGTYFARIIKVDTHIHAASCMNQKHLLRFIKKTL 581 (1001)
Q Consensus 507 dll~~~~~gp----~~kRL~~L~~Kf~L-~~lN~~~E~~~~~~k~~~~rDFyn~pKVDlHiHlsg~msqk~LlefI~~k~ 581 (1001)
|++++++|| |+|||+||++||+| ++||+.+|+.++++|.+|||||||++|||||+|+||||||||||+|||+|+
T Consensus 792 -l~~~~~~~~~ksf~~~RL~~Le~kf~Lh~~lN~~~E~~~~~~k~~~~rDFYn~rKVDthih~sacm~qk~LL~FIk~kl 870 (1453)
T PTZ00310 792 -LRDICSSVEVKRLATKRLENLEHKFRLHLALNHSNEAGTTEERESSNRDFYQAYKVDTHIHMAAGMTARQLLEFVVDKL 870 (1453)
T ss_pred -HHHHHhCchHHHHHHHHHHHHHHHHHHHHHhcchhhhhhHHhhcCCCCCceeeeeeccccchhccCCHHHHHHHHHHHH
Confidence 999999999 99999999999999 999999997545999999999999999999999999999999999999999
Q ss_pred ccCCCcEEEECCCCcccCHHHHHHhcCCCcccccccccccccCcccccccchhhcccCCcchhHHHHHhhhhccCCCHHH
Q psy47 582 KNHTDEVVTKDRTGQTMTLRQVFQSMNLTSYDLTVDMLDVHADRNTFHRFDKFNAKYNPIGESRLREVFLKTDNYLGGTY 661 (1001)
Q Consensus 582 ~~~~~~iV~~~~~g~~~TL~evF~~~~l~~~dltvd~Ldv~ad~~~f~rFd~Fn~kY~p~g~~~Lr~iFlktdn~i~geY 661 (1001)
+++||+||+.+ +|+++||+|+|+++|++++ +|||+|+||||+++|||||+||.||||+|+++||++||||||+|+|+|
T Consensus 871 ~~~~d~vV~~~-~g~~~TL~evF~~l~~t~~-lsvd~L~v~ad~~~f~rfD~fn~kynP~g~s~LreiFLktDN~i~G~Y 948 (1453)
T PTZ00310 871 LESGDDIAFKR-GDHIVTLGQLFSKYGITPN-LTVDQLNVQADHTLFERFDNFNSKYNPMENPDLRSLLLKTDNFMKGRY 948 (1453)
T ss_pred hcCCCcEEEcC-CCccccHHHHHHHcCCCcc-cchhhhccccCcchhhhhhcccccCCCcccHHHHHHHccCCCCcccHh
Confidence 99999999976 5999999999999999999 999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHcccceEEEEEeccCCChhHHHHHHHHHHHhCccccceeeEEEeccchhHHHhhHHHHHHHHHHHhh
Q psy47 662 FARIIKEVAADLEESKYQNAELRLSIYGKSEDEWDKLATWAIESNVYSNNIRWLIQIPRLYDIFKSNKLINNFQEILQNI 741 (1001)
Q Consensus 662 fa~iikEvi~dle~~k~qYaElR~siyG~s~~ew~~la~w~~~~~l~s~~vRwlIqIpR~y~~~~a~~~v~~f~e~L~nI 741 (1001)
||+|||+|++++++++||++|+|+||||++.+||++||+|+++|+++|.++||+|||||+|+++++.|.+.+|++||+||
T Consensus 949 fAel~K~v~~~le~skyq~aE~RlSIYG~~~~EW~kLA~W~~~~~l~S~nvrW~IQiPRlY~~~k~~g~v~~F~~~L~nI 1028 (1453)
T PTZ00310 949 FAELIKDVFEQYSRDRFTYAENRLSIYGINVKEWDDLAHWFDTHGMASKHNKWMIQVPRVYKVFRAQNVIGSFGQYLDNI 1028 (1453)
T ss_pred HHHHHHHHHHHHHhccceeeeeeEeeeCCCHHHHHHHHHHHHHcCCCCCCceEEEecchhhHHHHhcCCcCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccccccCCCCchhhhhhcccceeEEeecCCCCCCCCCCccCCCCCCCCCCCCCCchhHHHHHHHHHhhhchhhhhhc
Q psy47 742 FKPLFEVTNDSSSHPHLHKFLQYVIGFDSVDDESKPENPLFDADVLTPPQWNLEENPCYAYYQYYTYANLTVLNQSTGRR 821 (1001)
Q Consensus 742 F~PLf~at~~p~~~~eL~~fl~~VvGfDLvgdEs~~~~~~f~~~~~~P~~w~~~~nPp~~y~~~y~~ANi~~LN~~Rr~~ 821 (1001)
|.|||+||.+|++||+|+.||++|+|||+|+||++.+.. |.. +.|.+|++.+||||+||+||+||||++||++|+++
T Consensus 1029 F~PLFeat~~P~~hp~L~~FL~~v~gfDsVddEsk~e~~-~~~--~~P~~W~~~~NPpy~Yy~YY~yaNi~~LN~~R~~r 1105 (1453)
T PTZ00310 1029 FQPLWEASLHPSKHPKFHYFLNHVSGFDSVDNEATIDLP-FTD--VSPWAWTSVENPPYNYYLYYLYANIRTLNEFRASR 1105 (1453)
T ss_pred HHHhHhhhcCcccChHHHHHHHHhCcceEEcCCcccccc-cCC--CChhhccCCCCCchhHhHHHHHHHHHHHHHHHHHC
Confidence 999999999999999999999999999999999997754 432 46999999999999999999999999999999999
Q ss_pred CCCCccccCCCChhh------------------hhccCCcchhhhHhccCceEEEEecCccccccccccCCChHHHHHCC
Q psy47 822 SRRETNLQPGAYKAD------------------ALTSKFPNAQDIYDHEITIRIAMSPLSNNSLFLNYHRNPLPEYLARG 883 (1001)
Q Consensus 822 GL~t~~lt~HaGEaG------------------~lLr~~P~LqyLyy~e~qIpLEvCPlSN~~l~~~y~~HPf~~~~~~G 883 (1001)
|+|||.|||||||+| +.+.++|.|+|+||. +||||||||+||+.+..+|.+|||++|+++|
T Consensus 1106 glnTf~~rpHAGEag~~~hI~~AlL~a~RIgHGi~l~~dp~L~yl~~l-~qI~LevCPlSN~~l~~sy~~hP~~~f~~~G 1184 (1453)
T PTZ00310 1106 GFSTFALRPHCGESGSMDHLYGAFLCANSICHGINLRNDPPMQYLYYL-AQIGLHVSPLSNNALFLAFLENPFPVFFHRG 1184 (1453)
T ss_pred CCCCcCccccCCCCCCHHHHHHHHhCCccccchhhhCcCHHHHHHHHH-cCCeEEECCCchHhhhhchhhCcHHHHHHCC
Confidence 999999999999995 223579999999888 9999999999999877799999999999999
Q ss_pred CcEEEcCCCccccCCCCCChHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCChhhhc-cccCcCcCCCc
Q psy47 884 LVVSLSTDDPLQFHFTKEPLMEEYSIAAQVWKLSSCDMCELARNSVLMSGFPHGVAG-WDLPDVPNAGH 951 (1001)
Q Consensus 884 l~VsLsTDDPl~F~~T~t~L~eEY~iAa~~~~Ls~~DL~eLArNSV~~Sf~~~~~K~-~Lg~~~~~~g~ 951 (1001)
++||||||||++||+|++||++||++|++.|+||.+|||+||||||.+|||+...|+ |||..|...|.
T Consensus 1185 l~VSLnTDDPl~f~tT~EpL~eEYsiaa~~~~LS~~Dl~elarNSV~~SGf~~~~K~~wlG~~~~~~~~ 1253 (1453)
T PTZ00310 1185 LNVSLSTDDPLMFHQTQEPLIEEYSIAARVWGLSLNDLCEIARNSVLQSGFDAAFKRNAIGDRWYLSSS 1253 (1453)
T ss_pred CEEEECCCCccccCCCcccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHcCCCHHHHHHhhcchhhcCCC
Confidence 999999999999999999999999999999999999999999999999999999999 99988876543
No 2
>KOG1096|consensus
Probab=100.00 E-value=8.7e-161 Score=1365.35 Aligned_cols=459 Identities=57% Similarity=0.920 Sum_probs=452.0
Q ss_pred CCCCCCCCHHHHhhhccccccchhhhhHHhhcCcc----hHHHHHHHHhhcCc-cccChhhhhccccccccCcccccccc
Q psy47 482 DRTGQTMTLRQVFQSMNLTSYDLTVDMLDVHADRN----TFHRFDKFNAKYNP-IGESRLREVFLKTDNYLGGTYFARII 556 (1001)
Q Consensus 482 ~~~~~~pt~~ef~~D~~~~~~dl~vdll~~~~~gp----~~kRL~~L~~Kf~L-~~lN~~~E~~~~~~k~~~~rDFyn~p 556 (1001)
+...++||++||..|++. ++++|++|| |+|||+||++||+| ++||+++|+. ++|+||||||||||
T Consensus 249 ~~~~~iPt~~ef~~D~~~--------ll~lI~dgp~ksf~~RRLqyLe~KF~l~~~LNe~~El~--~~K~vPHRDFYNvR 318 (768)
T KOG1096|consen 249 EVLLPIPTLQEFRDDFEK--------LLALIADGPLKSFCHRRLQYLESKFQLHQLLNEKKELL--AQKKVPHRDFYNVR 318 (768)
T ss_pred CcCCCCCcHHHHHHHHHH--------HHHHHhcCChhHHHHHHHHHHHHHhHHHHHHHHHHHHH--HhcCCCcccccccc
Confidence 457899999999999999 999999999 99999999999999 9999999999 99999999999999
Q ss_pred cccccccccCCCCHHHHHHHHHHHhccCCCcEEEECCCCcccCHHHHHHhcCCCcccccccccccccCcccccccchhhc
Q psy47 557 KVDTHIHAASCMNQKHLLRFIKKTLKNHTDEVVTKDRTGQTMTLRQVFQSMNLTSYDLTVDMLDVHADRNTFHRFDKFNA 636 (1001)
Q Consensus 557 KVDlHiHlsg~msqk~LlefI~~k~~~~~~~iV~~~~~g~~~TL~evF~~~~l~~~dltvd~Ldv~ad~~~f~rFd~Fn~ 636 (1001)
|||||+|+|||||||||+||||+|++++||++|+.++ |+.+||+|||+.+|+++||+++|+|||||+++||||||+||.
T Consensus 319 KVDthih~SaCmnQkhLlrFIk~klr~epdrvV~~~~-g~~lTLrevF~~l~L~~yDlsvd~ldvha~~~tfHrfdkfn~ 397 (768)
T KOG1096|consen 319 KVDTHIHASACMNQKHLLRFIKKKLRKEPDRVVIQRD-GRKLTLREVFKSLGLTAYDLSVDTLDVHADRNTFHRFDKFNA 397 (768)
T ss_pred hhcchhhHhhhcCHHHHHHHHHHHhhcCCceEEEecC-CceeeHHHHHHHcCCceeccchhHHHhhhchhhhhccchhhh
Confidence 9999999999999999999999999999999999887 999999999999999999999999999999999999999999
Q ss_pred ccCCcchhHHHHHhhhhccCCCHHHHHHHHHHHHHHHHHcccceEEEEEeccCCChhHHHHHHHHHHHhCccccceeeEE
Q psy47 637 KYNPIGESRLREVFLKTDNYLGGTYFARIIKEVAADLEESKYQNAELRLSIYGKSEDEWDKLATWAIESNVYSNNIRWLI 716 (1001)
Q Consensus 637 kY~p~g~~~Lr~iFlktdn~i~geYfa~iikEvi~dle~~k~qYaElR~siyG~s~~ew~~la~w~~~~~l~s~~vRwlI 716 (1001)
||||.|+++||+||+||||+|+|+|||+|+|+|+.|++++|||+||+|+||||++.+||++||.|+++|+++|+|+||+|
T Consensus 398 Kynp~g~s~LR~iFLktDNyI~GeYlAei~Kev~~dleeSKYQ~ae~rlsiygrs~~EW~klA~W~v~~~v~S~NvRWlI 477 (768)
T KOG1096|consen 398 KYNPVGESRLREIFLKTDNYINGEYLAEILKEVLSDLEESKYQLAEPRLSIYGRSRDEWDKLASWLVDNKVFSPNVRWLI 477 (768)
T ss_pred hcCCccHHHHHHHHHhhccccchhhHHHHHHHHHhhHHHhhhhhcceeEEEeeeCHHHHHHHHHHHHHccccCCCeeEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeccchhHHHhhHHHHHHHHHHHhhcccccccccCCCCchhhhhhcccceeEEeecCCCCCCCCCCccCCCCCCCCCCCC
Q psy47 717 QIPRLYDIFKSNKLINNFQEILQNIFKPLFEVTNDSSSHPHLHKFLQYVIGFDSVDDESKPENPLFDADVLTPPQWNLEE 796 (1001)
Q Consensus 717 qIpR~y~~~~a~~~v~~f~e~L~nIF~PLf~at~~p~~~~eL~~fl~~VvGfDLvgdEs~~~~~~f~~~~~~P~~w~~~~ 796 (1001)
||||+|++++.+|+|.|||+||+|||.|||+||.+|+.||+|+.||++|+|||+|+||++++|+.|.++.|.|.+||..+
T Consensus 478 QipRiydvy~~~g~v~nFqe~L~nIF~PLFeat~~p~~hp~Lh~FL~~V~gfDsVdDesk~~~~~Ft~~sp~P~~Wt~~~ 557 (768)
T KOG1096|consen 478 QIPRLYDVYRKKGIVKNFQEMLDNIFLPLFEATKDPSSHPELHVFLQQVSGFDSVDDESKYEWKNFTRKSPKPKEWTAED 557 (768)
T ss_pred ecchHhHHHHhcCchhhHHHHHHHHhhhhhhcccCCCcchHHHHHHHHhcCcccccccccccccccccCCCCchhccccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCchhHHHHHHHHHhhhchhhhhhcCCCCccccCCCChhh------------------hhccCCcchhhhHhccCceEEE
Q psy47 797 NPCYAYYQYYTYANLTVLNQSTGRRSRRETNLQPGAYKAD------------------ALTSKFPNAQDIYDHEITIRIA 858 (1001)
Q Consensus 797 nPp~~y~~~y~~ANi~~LN~~Rr~~GL~t~~lt~HaGEaG------------------~lLr~~P~LqyLyy~e~qIpLE 858 (1001)
||||+||+||+||||++||.+|+++|+|||+|||||||+| ++||+.|.||||||+ .||||+
T Consensus 558 NPpysyYlYY~YaNl~~LN~lR~~rg~nTf~LRphCgeag~~~hLvsafLla~gIshg~Llrk~PvLQYLyYL-~QIpIa 636 (768)
T KOG1096|consen 558 NPPYSYYLYYMYANLAKLNHLRRARGQNTFTLRPHCGEAGDIEHLVSAFLLAHGISHGILLRKVPVLQYLYYL-AQIPIA 636 (768)
T ss_pred CCchhhhHHHHHHHHHHHHHHHHHcCCceEEecCCCCCcCCHHHHHHHHHHhccccchhhhccchHHHHHHHH-Hhcchh
Confidence 9999999999999999999999999999999999999996 457999999999999 999999
Q ss_pred EecCccccccccccCCChHHHHHCCCcEEEcCCCccccCCCCCChHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCChhh
Q psy47 859 MSPLSNNSLFLNYHRNPLPEYLARGLVVSLSTDDPLQFHFTKEPLMEEYSIAAQVWKLSSCDMCELARNSVLMSGFPHGV 938 (1001)
Q Consensus 859 vCPlSN~~l~~~y~~HPf~~~~~~Gl~VsLsTDDPl~F~~T~t~L~eEY~iAa~~~~Ls~~DL~eLArNSV~~Sf~~~~~ 938 (1001)
|+|+||++++++|.+|||++||++|++||||||||++||||++||+|||++|||+|+||.+||||||||||.+||+++++
T Consensus 637 mSPLSnnslfl~Y~kNPf~~~f~~GL~VSLSTddpLqf~yTkEPLiEEYSIAAqiykLss~DmCELaRNSVlqSGfs~~~ 716 (768)
T KOG1096|consen 637 MSPLSNNSLFLSYHKNPFPEYFKRGLNVSLSTDDPLQFHYTKEPLIEEYSIAAQVYKLSSCDMCELARNSVLQSGFSHQL 716 (768)
T ss_pred hccccccccccccccCchHHHHHhhceeeeccCCchhhhcccchHHHHHHHHHHHHhcccccHHHHHhhhhhhhcchHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hc-cccCcCcCCCcc
Q psy47 939 AG-WDLPDVPNAGHV 952 (1001)
Q Consensus 939 K~-~Lg~~~~~~g~~ 952 (1001)
|. |||..|.+.|..
T Consensus 717 K~hWlG~~y~k~g~~ 731 (768)
T KOG1096|consen 717 KSHWLGVNYKKEGPE 731 (768)
T ss_pred hhhhccCchhhcCCC
Confidence 99 999999997654
No 3
>TIGR01429 AMP_deaminase AMP deaminase. This model describes AMP deaminase, a large, well-conserved eukaryotic protein involved in energy metabolism. Most members of the family have an additional, poorly alignable region of 150 amino acids or more N-terminal to the region included in the model.
Probab=100.00 E-value=5.3e-135 Score=1176.40 Aligned_cols=458 Identities=57% Similarity=0.930 Sum_probs=442.9
Q ss_pred CCCCCCCCHHHHhhhccccccchhhhhHHhhcCcc----hHHHHHHHHhhcCc-cccChhhhhccccccccCcccccccc
Q psy47 482 DRTGQTMTLRQVFQSMNLTSYDLTVDMLDVHADRN----TFHRFDKFNAKYNP-IGESRLREVFLKTDNYLGGTYFARII 556 (1001)
Q Consensus 482 ~~~~~~pt~~ef~~D~~~~~~dl~vdll~~~~~gp----~~kRL~~L~~Kf~L-~~lN~~~E~~~~~~k~~~~rDFyn~p 556 (1001)
+...++||+++|+.|++. |++++++|| |++||+||++||+| ++||+.+|+. ++|.+|||||||+|
T Consensus 101 ~~~~~~~~~~~f~~D~~~--------l~~~~~~g~~~s~~~~RL~~Le~kf~L~~llN~~~E~~--~~k~~p~rDFyn~r 170 (611)
T TIGR01429 101 PHFLVPPTLKTYYVDMEH--------LLALISDGPTKSFCFRRLQYLESKFNLHELLNEMSELK--EQKSVPHRDFYNVR 170 (611)
T ss_pred ccccCCCCHHHHHHHHHH--------HHHHHhCchHHHHHHHHHHHHHHHHHHHHHhhhhhhHH--HhccCCCCCceeeE
Confidence 444567999999999999 999999999 99999999999999 9999999998 99999999999999
Q ss_pred cccccccccCCCCHHHHHHHHHHHhccCCCcEEEECCCCcccCHHHHHHhcCCCcccccccccccccCcccccccchhhc
Q psy47 557 KVDTHIHAASCMNQKHLLRFIKKTLKNHTDEVVTKDRTGQTMTLRQVFQSMNLTSYDLTVDMLDVHADRNTFHRFDKFNA 636 (1001)
Q Consensus 557 KVDlHiHlsg~msqk~LlefI~~k~~~~~~~iV~~~~~g~~~TL~evF~~~~l~~~dltvd~Ldv~ad~~~f~rFd~Fn~ 636 (1001)
|||||||||||||||||++|||+|++++||+||+..+ |+++||+|+|+++|++++++|+|+||||+++++|||||+||.
T Consensus 171 KVDthvh~s~cm~qk~LL~FIk~k~~~~pd~vV~~~~-gk~~TL~evf~~l~l~~~dltvd~Ldv~a~~~~fhrfd~fn~ 249 (611)
T TIGR01429 171 KVDTHIHAAASMNQKHLLRFIKHKLKTEPDETVIERD-GKKLTLREVFDSLHLDPYDLSVDTLDVHADRNTFHRFDKFNL 249 (611)
T ss_pred EeeccccccccCCHHHHHHHHHHHHHcCCCcEEecCC-CccccHHHHHHHcCCChhhCcHhhhCCcCCCCcccccccccc
Confidence 9999999999999999999999999999999999654 999999999999999999999999999999999999999999
Q ss_pred ccCCcchhHHHHHhhhhccCCCHHHHHHHHHHHHHHHHHcccceEEEEEeccCCChhHHHHHHHHHHHhCccccceeeEE
Q psy47 637 KYNPIGESRLREVFLKTDNYLGGTYFARIIKEVAADLEESKYQNAELRLSIYGKSEDEWDKLATWAIESNVYSNNIRWLI 716 (1001)
Q Consensus 637 kY~p~g~~~Lr~iFlktdn~i~geYfa~iikEvi~dle~~k~qYaElR~siyG~s~~ew~~la~w~~~~~l~s~~vRwlI 716 (1001)
||||+|+++||++||+|||+|+|+|||+|||+|+++++++|||++|+|+||||++.+||++||+|+++++++|.++||+|
T Consensus 250 kynp~G~s~Lr~iFLktdN~i~G~YfAelik~v~~~le~skyQ~~E~rlsiyG~~~~EW~kLA~W~~~~~l~s~n~rW~I 329 (611)
T TIGR01429 250 KYNPVGESRLREIFLKTDNYIGGKYFAELVKEVFTDLEDSKYQYAEPRLSIYGRSPKEWDSLARWIIDHDVFSPNVRWLI 329 (611)
T ss_pred ccCccchHHHHHHHhccCCCcchhhHHHHHHHHHHHHHhcCceeEEEEEEEeCCCHHHHHHHHHHHHHcCCCCCCccEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeccchhHHHhhHHHHHHHHHHHhhcccccccccCCCCchhhhhhcccceeEEeecCCCCCCCCCCccCCCCCCCCCCCC
Q psy47 717 QIPRLYDIFKSNKLINNFQEILQNIFKPLFEVTNDSSSHPHLHKFLQYVIGFDSVDDESKPENPLFDADVLTPPQWNLEE 796 (1001)
Q Consensus 717 qIpR~y~~~~a~~~v~~f~e~L~nIF~PLf~at~~p~~~~eL~~fl~~VvGfDLvgdEs~~~~~~f~~~~~~P~~w~~~~ 796 (1001)
||||+|+++++.|.+.+||++|+|||.|||+||++|++||+|+.||++|+|||+|+||++.++..|..+.++|.+|+.++
T Consensus 330 qiPRly~v~k~~g~v~~Fq~~L~NIF~PLFeat~~P~~~p~L~~fL~~v~GfD~VddEs~~e~~~f~~~~~~P~~w~~~~ 409 (611)
T TIGR01429 330 QVPRLYDVYRSKKLVPNFGDMLENVFLPLFEVTKDPSSHPELHLFLQQVTGFDSVDDESKHEDHMFSRKFPSPDEWTSEQ 409 (611)
T ss_pred EcchhHHHHhcCCCcCCHHHHHHHHHHHHHHHhcCCccCHHHHHHHHhccceEEEcCCcccccccccCCCCCcccccCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999899999999999999999
Q ss_pred CCchhHHHHHHHHHhhhchhhhhhcCCCCccccCCCChhh------------------hhccCCcchhhhHhccCceEEE
Q psy47 797 NPCYAYYQYYTYANLTVLNQSTGRRSRRETNLQPGAYKAD------------------ALTSKFPNAQDIYDHEITIRIA 858 (1001)
Q Consensus 797 nPp~~y~~~y~~ANi~~LN~~Rr~~GL~t~~lt~HaGEaG------------------~lLr~~P~LqyLyy~e~qIpLE 858 (1001)
||||+||+||+||||++||++|+++|++||.+||||||+| +.+.++|.|+|+||. +|||||
T Consensus 410 NPpy~Yy~YY~yaNl~~LN~~R~~rGLnt~~LrpHaGEag~~e~l~~A~L~adRIgHGi~l~~dp~L~yl~~~-~qI~Le 488 (611)
T TIGR01429 410 NPPYSYYLYYMYANIMVLNNFRRERGLNTFLLRPHCGEAGSVDHLVSAFLTSHGINHGILLRKVPVLQYLYYL-TQIPIA 488 (611)
T ss_pred CCCceeeHHHHHHHHHHHHHHHHHcCCCccceeecCCCCCCHHHHHHHhhcCcccccceecCCCHHHHHHHHH-cCCeEE
Confidence 9999999999999999999999999999999999999996 123569999999877 999999
Q ss_pred EecCccccccccccCCChHHHHHCCCcEEEcCCCccccCCCCCChHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCChhh
Q psy47 859 MSPLSNNSLFLNYHRNPLPEYLARGLVVSLSTDDPLQFHFTKEPLMEEYSIAAQVWKLSSCDMCELARNSVLMSGFPHGV 938 (1001)
Q Consensus 859 vCPlSN~~l~~~y~~HPf~~~~~~Gl~VsLsTDDPl~F~~T~t~L~eEY~iAa~~~~Ls~~DL~eLArNSV~~Sf~~~~~ 938 (1001)
|||+||+.+..+|.+|||+.|+++|++||||||||++||+|++||++||++|++.||||.+|||+||+|||.+||+++++
T Consensus 489 vCPtSN~~l~~~y~~HP~~~~~~~Gl~VSLsTDDPl~f~~T~epL~EEY~~aa~~~~Ls~~Dl~eLarNSV~~S~~~~~~ 568 (611)
T TIGR01429 489 MSPLSNNSLFLEYSKNPLPEYLHKGLNVSLSTDDPLQFHYTKEALMEEYAIAAQVWKLSTCDMCELARNSVLQSGFEHQV 568 (611)
T ss_pred EcCCcchhhccChhhChHHHHHHCCCeEEEcCCCchhhCCCCCcHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhCCCHHH
Confidence 99999998777999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hc-cccCcCcCCCc
Q psy47 939 AG-WDLPDVPNAGH 951 (1001)
Q Consensus 939 K~-~Lg~~~~~~g~ 951 (1001)
|+ |+|..|...|.
T Consensus 569 K~~~lg~~~~~~g~ 582 (611)
T TIGR01429 569 KQHWLGPNYYKEGP 582 (611)
T ss_pred HHHHhcCcchhcCC
Confidence 99 99998877554
No 4
>PLN02768 AMP deaminase
Probab=100.00 E-value=3.6e-134 Score=1180.12 Aligned_cols=455 Identities=51% Similarity=0.858 Sum_probs=440.1
Q ss_pred CCCCCCHHHHhhhccccccchhhhhHHhhcCcc----hHHHHHHHHhhcCc-cccChhhhhccccccccCcccccccccc
Q psy47 484 TGQTMTLRQVFQSMNLTSYDLTVDMLDVHADRN----TFHRFDKFNAKYNP-IGESRLREVFLKTDNYLGGTYFARIIKV 558 (1001)
Q Consensus 484 ~~~~pt~~ef~~D~~~~~~dl~vdll~~~~~gp----~~kRL~~L~~Kf~L-~~lN~~~E~~~~~~k~~~~rDFyn~pKV 558 (1001)
..++||+++|+.|++. |++++++|| |++||+||++||+| ++||+.+|+. ++|.+|||||||||||
T Consensus 315 ~~p~~~~~~F~~D~~~--------l~~~i~dg~~ksfc~~RL~~Le~Kf~Lh~lLN~~~E~~--~~K~~phrDFYnvrKV 384 (835)
T PLN02768 315 LFPVADATTFFTDLHH--------ILRVIAAGNIRTLCHHRLNLLEQKFNLHLMLNADREFL--AQKSAPHRDFYNVRKV 384 (835)
T ss_pred cCCCCCHHHHHHHHHH--------HHHHHhCchHHHHHHHHHHHHHHHHHHHHHhcchhhhH--hhccCCCCCceeeeEe
Confidence 5789999999999999 999999999 99999999999999 9999999999 9999999999999999
Q ss_pred cccccccCCCCHHHHHHHHHHHhccCCCcEEEECCCCcccCHHHHHHhcCCCcccccccccccccCcccccccchhhccc
Q psy47 559 DTHIHAASCMNQKHLLRFIKKTLKNHTDEVVTKDRTGQTMTLRQVFQSMNLTSYDLTVDMLDVHADRNTFHRFDKFNAKY 638 (1001)
Q Consensus 559 DlHiHlsg~msqk~LlefI~~k~~~~~~~iV~~~~~g~~~TL~evF~~~~l~~~dltvd~Ldv~ad~~~f~rFd~Fn~kY 638 (1001)
||||||||||||||||+|||+|++++||+||+.++ |+.+||+|+|++++++.+++++|.||||+++++|||||+||.||
T Consensus 385 Dthvh~sacMnqk~LLrFIk~kl~~epd~vV~~~d-Gk~~TL~evFe~l~lt~ydLsVD~Ldvha~~~tfhRfDkFn~ky 463 (835)
T PLN02768 385 DTHVHHSACMNQKHLLRFIKSKLRKEPDEVVIFRD-GTYLTLKEVFESLDLTGYDLNVDLLDVHADKSTFHRFDKFNLKY 463 (835)
T ss_pred eccchhhccCCHHHHHHHHHHHHhcCCCceeeccC-CccccHHHHHHHcCCcccCCcccccccCCCcccccccccccccc
Confidence 99999999999999999999999999999999755 99999999999999999999999999999999999999999999
Q ss_pred CCcchhHHHHHhhhhccCCCHHHHHHHHHHHHHHHHHcccceEEEEEeccCCChhHHHHHHHHHHHhCccccceeeEEEe
Q psy47 639 NPIGESRLREVFLKTDNYLGGTYFARIIKEVAADLEESKYQNAELRLSIYGKSEDEWDKLATWAIESNVYSNNIRWLIQI 718 (1001)
Q Consensus 639 ~p~g~~~Lr~iFlktdn~i~geYfa~iikEvi~dle~~k~qYaElR~siyG~s~~ew~~la~w~~~~~l~s~~vRwlIqI 718 (1001)
||+|+++||++||||||+|+|+|||+|||+|+++++++|||++|+|++|||++.+||++||+|+++++++|.++||+|||
T Consensus 464 nP~G~s~LReiFLktDN~i~GrYfAELiK~V~~dlE~sKyQ~aE~RlsIYGr~~~EW~kLA~W~v~~~l~S~nvRWlIQI 543 (835)
T PLN02768 464 NPCGQSRLREIFLKQDNLIQGRFLAELTKQVFSDLEASKYQMAEYRISIYGRKQSEWDQLASWIVNNELYSENVVWLIQL 543 (835)
T ss_pred CccchHHHHHHHcCcCCCCChhhHHHHHHHHHHHHHhccceeeEEEEEecCCCHHHHHHHHHHHHHcCCCCCCceEEEEc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccchhHHHhhHHHHHHHHHHHhhcccccccccCCCCchhhhhhcccceeEEeecCCCCCCCCCCccCCCCCCCCCCCCCC
Q psy47 719 PRLYDIFKSNKLINNFQEILQNIFKPLFEVTNDSSSHPHLHKFLQYVIGFDSVDDESKPENPLFDADVLTPPQWNLEENP 798 (1001)
Q Consensus 719 pR~y~~~~a~~~v~~f~e~L~nIF~PLf~at~~p~~~~eL~~fl~~VvGfDLvgdEs~~~~~~f~~~~~~P~~w~~~~nP 798 (1001)
||+|+++++.+.+.+||++|+|||.|||+||++|++||+|+.||++|+|||+|+||++.+.. +....++|.+|+.++||
T Consensus 544 PRlY~i~k~~g~v~nFqd~L~NIF~PLFeATl~P~~hp~L~~FL~~V~GFDsVdDESk~e~~-~~~~~p~P~~W~~~~NP 622 (835)
T PLN02768 544 PRLYNVYKEMGIVTSFQNILDNIFIPLFEVTVDPDSHPQLHVFLKQVVGLDLVDDESKPERR-PTKHMPTPAQWTNVFNP 622 (835)
T ss_pred ccchhhhhcCCccCCHHHHHHHHHHHHHHHhcCCccCHHHHHHHHhcCCceeecCCCccccc-cCcCCCChhhCcCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999998764 46678899999999999
Q ss_pred chhHHHHHHHHHhhhchhhhhhcCCCCccccCCCChhh------------------hhccCCcchhhhHhccCceEEEEe
Q psy47 799 CYAYYQYYTYANLTVLNQSTGRRSRRETNLQPGAYKAD------------------ALTSKFPNAQDIYDHEITIRIAMS 860 (1001)
Q Consensus 799 p~~y~~~y~~ANi~~LN~~Rr~~GL~t~~lt~HaGEaG------------------~lLr~~P~LqyLyy~e~qIpLEvC 860 (1001)
||+||+||+||||++||+||+++|+|||.|||||||+| +.+.++|.|+|+||. +|||||||
T Consensus 623 PyaYYlYYmyANi~~LN~lR~~rGlNTf~fRPHAGEag~~e~I~~AlL~AdRIgHGv~l~kdP~LqyL~~l-~qIgLevC 701 (835)
T PLN02768 623 AFSYYVYYCYANLYTLNKLRESKGMTTIKFRPHSGEAGDIDHLAATFLTCHNIAHGINLRKSPVLQYLYYL-AQIGLAMS 701 (835)
T ss_pred ChhhhHHHHHHHHHHHHHHHHHCCCCccccccccCCCCCHHHHHHHHhcCCccCCccccCcCHHHHHHHHH-cCCeEEEC
Confidence 99999999999999999999999999999999999986 123569999999988 99999999
Q ss_pred cCccccccccccCCChHHHHHCCCcEEEcCCCccccCCCCCChHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCChhhhc
Q psy47 861 PLSNNSLFLNYHRNPLPEYLARGLVVSLSTDDPLQFHFTKEPLMEEYSIAAQVWKLSSCDMCELARNSVLMSGFPHGVAG 940 (1001)
Q Consensus 861 PlSN~~l~~~y~~HPf~~~~~~Gl~VsLsTDDPl~F~~T~t~L~eEY~iAa~~~~Ls~~DL~eLArNSV~~Sf~~~~~K~ 940 (1001)
|+||+.+..+|.+|||+.|+++|++||||||||++||+|++||++||++|++.|+||.+|||+||||||++||+++++|+
T Consensus 702 PlSN~~l~~~y~~HPf~~f~~~GL~VSLNTDDPL~fhtT~epL~EEYsvAak~~~LS~~DL~ELarNSV~aSff~~~~K~ 781 (835)
T PLN02768 702 PLSNNSLFLDYHRNPFPMFFLRGLNVSLSTDDPLQIHLTKEPLVEEYSIAASVWKLSSCDLCEIARNSVYQSGFSHALKS 781 (835)
T ss_pred CCcchhhhcchhhChHHHHHHCCCEEEEcCCCccccCCCCCCHHHHHHHHHHHhCcCHHHHHHHHHHHHHHhcCCHHHHH
Confidence 99999877799999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred -cccCcCcCCCc
Q psy47 941 -WDLPDVPNAGH 951 (1001)
Q Consensus 941 -~Lg~~~~~~g~ 951 (1001)
|+|..|...|.
T Consensus 782 ~wLg~~y~~~g~ 793 (835)
T PLN02768 782 HWIGKEYYKRGP 793 (835)
T ss_pred HHHhccccccCC
Confidence 99998876554
No 5
>PLN03055 AMP deaminase; Provisional
Probab=100.00 E-value=6.6e-128 Score=1114.16 Aligned_cols=455 Identities=54% Similarity=0.886 Sum_probs=439.6
Q ss_pred CCCCCCHHHHhhhccccccchhhhhHHhhcCcc----hHHHHHHHHhhcCc-cccChhhhhccccccccCcccccccccc
Q psy47 484 TGQTMTLRQVFQSMNLTSYDLTVDMLDVHADRN----TFHRFDKFNAKYNP-IGESRLREVFLKTDNYLGGTYFARIIKV 558 (1001)
Q Consensus 484 ~~~~pt~~ef~~D~~~~~~dl~vdll~~~~~gp----~~kRL~~L~~Kf~L-~~lN~~~E~~~~~~k~~~~rDFyn~pKV 558 (1001)
..++||+++|+.|++. |++++++|| |++||+||++||+| ++||+.+|.. ++|.+|||||||+|||
T Consensus 82 ~~~~p~~~~f~~D~~~--------l~~~~~~g~~~s~~~~RL~~Le~kf~L~~~lN~~~E~~--~~k~~p~rDFyn~rKV 151 (602)
T PLN03055 82 LFPVPDATTFFTDMHR--------ILRIVSLGNVRTFCHHRLKLLEQKFSLHLMLNADREFL--AQKSAPHRDFYNVRKV 151 (602)
T ss_pred CCCCCCHHHHHHHHHH--------HHHHHhCcchHHHHHHHHHHHHHHHHHHHHHhhhhHHH--HhccCCCCCceeeeEe
Confidence 5789999999999999 999999999 99999999999999 9999999998 9999999999999999
Q ss_pred cccccccCCCCHHHHHHHHHHHhccCCCcEEEECCCCcccCHHHHHHhcCCCcccccccccccccCcccccccchhhccc
Q psy47 559 DTHIHAASCMNQKHLLRFIKKTLKNHTDEVVTKDRTGQTMTLRQVFQSMNLTSYDLTVDMLDVHADRNTFHRFDKFNAKY 638 (1001)
Q Consensus 559 DlHiHlsg~msqk~LlefI~~k~~~~~~~iV~~~~~g~~~TL~evF~~~~l~~~dltvd~Ldv~ad~~~f~rFd~Fn~kY 638 (1001)
||||||||||||||||+|||+|++++||+||..+ +|+++||+|+|+++|++.++||||+||||+++++|||||+||.||
T Consensus 152 Dthvh~s~cm~qk~LL~FIk~k~~~~pd~vV~~~-~gk~~TL~evfe~l~~~~~dLtVd~Ldvha~~~~fhrfD~fn~ky 230 (602)
T PLN03055 152 DTHVHHSSCMNQKHLLRFIKSKLRKEPDEVVIFR-DGKYLTLREVFESLDLTGYDLNVDLLDVHADKNTFHRFDKFNLKY 230 (602)
T ss_pred eccccccccCCHHHHHHHHHHHHHcCCCcEeecC-CCcchhHHHHHHHcCCCcccCcccccCccCCCCcccccccccccC
Confidence 9999999999999999999999999999999765 499999999999999999999999999999999999999999999
Q ss_pred CCcchhHHHHHhhhhccCCCHHHHHHHHHHHHHHHHHcccceEEEEEeccCCChhHHHHHHHHHHHhCccccceeeEEEe
Q psy47 639 NPIGESRLREVFLKTDNYLGGTYFARIIKEVAADLEESKYQNAELRLSIYGKSEDEWDKLATWAIESNVYSNNIRWLIQI 718 (1001)
Q Consensus 639 ~p~g~~~Lr~iFlktdn~i~geYfa~iikEvi~dle~~k~qYaElR~siyG~s~~ew~~la~w~~~~~l~s~~vRwlIqI 718 (1001)
||+|+++||++||+|||+|+|+|||+|||+|+++++++|||++|+|++|||++.+||++||+|+++++++|.++||+|||
T Consensus 231 np~g~s~Lr~iFLktdN~i~G~YlAel~k~v~~~le~skyQ~~E~rlsiYG~~~~EW~kLA~W~~~~~l~s~n~rW~Iqi 310 (602)
T PLN03055 231 NPCGQSRLREIFLKQDNLIQGRFLAELTKEVFSDLEASKYQMAEYRISIYGRKQSEWDQLASWIVNNRLYSENVVWLIQL 310 (602)
T ss_pred CccchHHHHHHHcCcCCCcchhhHHHHHHHHHHHHHhccceeEEEEEEEeCCCHHHHHHHHHHHHHcCcCCCCceEEEec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccchhHHHhhHHHHHHHHHHHhhcccccccccCCCCchhhhhhcccceeEEeecCCCCCCCCCCccCCCCCCCCCCCCCC
Q psy47 719 PRLYDIFKSNKLINNFQEILQNIFKPLFEVTNDSSSHPHLHKFLQYVIGFDSVDDESKPENPLFDADVLTPPQWNLEENP 798 (1001)
Q Consensus 719 pR~y~~~~a~~~v~~f~e~L~nIF~PLf~at~~p~~~~eL~~fl~~VvGfDLvgdEs~~~~~~f~~~~~~P~~w~~~~nP 798 (1001)
||+|+++++.|.+.+||++|+|||.|||+||++|++||+|+.||++|+|||+|+||++.+.. +..++++|.+|+.++||
T Consensus 311 PRly~~~~~~g~v~~Fqd~L~NIF~PLFeatl~P~~hp~L~~fL~~v~gfD~VddEs~~e~~-~~~~~~~P~~W~~~~NP 389 (602)
T PLN03055 311 PRLYNVYKEMGIVQSFQQILDNIFKPLFEVTVDPSSHPQLHVFLKMVVGFDMVDDESKPERR-PTKHMQTPEQWDIPFNP 389 (602)
T ss_pred CcchhhhhcCCCcCCHHHHHHHHHHHHHHHHcCcccCHHHHHHHHhcCCceeecCCCccccc-cccCCCChhhCcCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999998754 57788999999999999
Q ss_pred chhHHHHHHHHHhhhchhhhhhcCCCCccccCCCChhh-------h-----------hccCCcchhhhHhccCceEEEEe
Q psy47 799 CYAYYQYYTYANLTVLNQSTGRRSRRETNLQPGAYKAD-------A-----------LTSKFPNAQDIYDHEITIRIAMS 860 (1001)
Q Consensus 799 p~~y~~~y~~ANi~~LN~~Rr~~GL~t~~lt~HaGEaG-------~-----------lLr~~P~LqyLyy~e~qIpLEvC 860 (1001)
||+||+||+||||++||+||+++|+|||.+||||||+| + .+.++|.|+|+||. +|||||||
T Consensus 390 py~Yy~YY~yaNl~~LN~lR~~rglnT~~~rpHAGEag~~~~v~~alL~a~RIgHGi~l~~dP~L~yl~~~-~qI~LevC 468 (602)
T PLN03055 390 AYSYWAYYVYANLYTLNKLRESKGLNTIKFRPHAGEAGDIDHLAAAFLLAHNIAHGNNLRKSPGLQYLYYL-AQIGLAMS 468 (602)
T ss_pred CcchhHHHHHHHHHHHHHHHHHcCCCCCCccccCCCCCCHHHHHHHhhCCceecCccccCCCHHHHHHHHH-cCCeEEEc
Confidence 99999999999999999999999999999999999996 1 23579999998877 99999999
Q ss_pred cCccccccccccCCChHHHHHCCCcEEEcCCCccccCCCCCChHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCChhhhc
Q psy47 861 PLSNNSLFLNYHRNPLPEYLARGLVVSLSTDDPLQFHFTKEPLMEEYSIAAQVWKLSSCDMCELARNSVLMSGFPHGVAG 940 (1001)
Q Consensus 861 PlSN~~l~~~y~~HPf~~~~~~Gl~VsLsTDDPl~F~~T~t~L~eEY~iAa~~~~Ls~~DL~eLArNSV~~Sf~~~~~K~ 940 (1001)
|+||+.+..+|.+|||+.|+++|++||||||||++||+|++||++||++|++.|+||.+|||+||+|||.+||+++++|+
T Consensus 469 PlSN~~l~~~y~~HP~~~~~~~Gl~VSInTDDPl~f~tT~epL~eEY~~aa~~~~LS~~DL~eLarNSV~~Sf~~~~~K~ 548 (602)
T PLN03055 469 PLSNNSLFLDYHRNPFPMFFARGLNVSLSTDDPLQIHLTKEPLVEEYSIAAQVWKLSSCDLCEIARNSVLQSGFPHASKK 548 (602)
T ss_pred cCcchhhccchhhChHHHHHHCCCEEEEcCCCcchhcCCCCcHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcCCHHHHH
Confidence 99999887799999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred -cccCcCcCCCc
Q psy47 941 -WDLPDVPNAGH 951 (1001)
Q Consensus 941 -~Lg~~~~~~g~ 951 (1001)
|+|..|...|.
T Consensus 549 ~~lg~~y~~~~~ 560 (602)
T PLN03055 549 HWVGDNYWLRGP 560 (602)
T ss_pred HHhccchhhcCC
Confidence 99998876554
No 6
>cd01319 AMPD AMP deaminase (AMPD) catalyzes the hydrolytic deamination of adensosine monophosphate (AMP) at position 6 of the adenine nucleotide ring. AMPD is a diverse and highly regulated eukaryotic key enzyme of the adenylate catabolic pathway.
Probab=100.00 E-value=1.2e-126 Score=1092.26 Aligned_cols=446 Identities=59% Similarity=0.966 Sum_probs=431.8
Q ss_pred HhhhccccccchhhhhHHhhcCcc----hHHHHHHHHhhcCc-cccChhhhhccccccccCcccccccccccccccccCC
Q psy47 493 VFQSMNLTSYDLTVDMLDVHADRN----TFHRFDKFNAKYNP-IGESRLREVFLKTDNYLGGTYFARIIKVDTHIHAASC 567 (1001)
Q Consensus 493 f~~D~~~~~~dl~vdll~~~~~gp----~~kRL~~L~~Kf~L-~~lN~~~E~~~~~~k~~~~rDFyn~pKVDlHiHlsg~ 567 (1001)
|++|++. +++++++|| |++||+||++||+| ++||+.+|.. ++|.+|||||||+||||+|+|+|||
T Consensus 1 ~~~D~~~--------l~~~~~~~~~~s~~~~RL~~L~~kf~l~~~lN~~~E~~--~~k~~~~rdfyn~~KVD~~vh~s~c 70 (496)
T cd01319 1 FYLDLEF--------LLALISDGPAKSFCYRRLQYLESKFQLHVLLNEDRELK--EQKTVPHRDFYNVRKVDTHVHHSAC 70 (496)
T ss_pred ChhHHHH--------HHHHHhCccHHHHHHHHHHHHHHHHHHHHHhhhhhhhh--hcccCCCCCceeCceeccccccccc
Confidence 6789999 999999999 99999999999999 9999999999 9999999999999999999999999
Q ss_pred CCHHHHHHHHHHHhccCCCcEEEECCCCcccCHHHHHHhcCCCcccccccccccccCcccccccchhhcccCCcchhHHH
Q psy47 568 MNQKHLLRFIKKTLKNHTDEVVTKDRTGQTMTLRQVFQSMNLTSYDLTVDMLDVHADRNTFHRFDKFNAKYNPIGESRLR 647 (1001)
Q Consensus 568 msqk~LlefI~~k~~~~~~~iV~~~~~g~~~TL~evF~~~~l~~~dltvd~Ldv~ad~~~f~rFd~Fn~kY~p~g~~~Lr 647 (1001)
||||||++|||+|++++||+||+.. +|+++||+|+|+.+|++++++|||+||||+++++|||||+||.||||+|+++||
T Consensus 71 m~~k~Ll~FI~~k~~~~pd~vv~~~-~g~~~TL~e~f~~l~~~~~~ltvd~L~~~a~~~~~~rfd~fn~kynp~g~~~Lr 149 (496)
T cd01319 71 MNQKHLLRFIKKKLRTEPDEVVIFR-DGKKLTLKEVFDSLKLTAYDLSVDTLDVHADRNTFHRFDKFNLKYNPIGESRLR 149 (496)
T ss_pred CCHHHHHHHHHHHHHcCCCcEEECC-CCccccHHHHHHHcCCChhhCchhhcCcCCCCCccccccccccccCccchHHHH
Confidence 9999999999999999999999965 499999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhhccCCCHHHHHHHHHHHHHHHHHcccceEEEEEeccCCChhHHHHHHHHHHHhCccccceeeEEEeccchhHHHh
Q psy47 648 EVFLKTDNYLGGTYFARIIKEVAADLEESKYQNAELRLSIYGKSEDEWDKLATWAIESNVYSNNIRWLIQIPRLYDIFKS 727 (1001)
Q Consensus 648 ~iFlktdn~i~geYfa~iikEvi~dle~~k~qYaElR~siyG~s~~ew~~la~w~~~~~l~s~~vRwlIqIpR~y~~~~a 727 (1001)
++||+|||+|+|+|||+|||+|++++|++|||++|+|++|||++.+||++||+|+++++++|.++||+|||||+|+++++
T Consensus 150 ~iFLktdn~~~G~y~Ael~k~v~~~le~~kyq~~E~rlsiyG~~~~Ew~~lA~W~~~~~l~s~n~rW~iqipR~y~~~~~ 229 (496)
T cd01319 150 EIFLKTDNYINGRYLAEITKEVFSDLEESKYQHAEYRLSIYGRSKDEWDKLASWVVDNDLFSPNVRWLIQIPRLYDVYKK 229 (496)
T ss_pred HHHhccCCCcchHhHHHHHHHHHHHHHhccceeEEEEEEEeCCCHHHHHHHHHHHHHcCCCCCCceEEEecchhHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHhhcccccccccCCCCchhhhhhcccceeEEeecCCCCCCCCCCccCCCCCCCCCCCCCCchhHHHHHH
Q psy47 728 NKLINNFQEILQNIFKPLFEVTNDSSSHPHLHKFLQYVIGFDSVDDESKPENPLFDADVLTPPQWNLEENPCYAYYQYYT 807 (1001)
Q Consensus 728 ~~~v~~f~e~L~nIF~PLf~at~~p~~~~eL~~fl~~VvGfDLvgdEs~~~~~~f~~~~~~P~~w~~~~nPp~~y~~~y~ 807 (1001)
+|.+.+||++|+|||.|||+||++|++||+|+.||++|+|||+|+||++ .++.|..++|+|.+|+.++||||+||+||+
T Consensus 230 ~g~~~~Fq~~L~nIF~PLfeat~~P~~~p~l~~fL~~v~gfd~VddEs~-~~~~~~~~~p~P~~w~~~~nPpy~Yy~YY~ 308 (496)
T cd01319 230 SGIVNSFQEMLENIFEPLFEATKDPSSHPELHVFLQQVIGFDSVDDESK-SERRFTRKFPKPEEWTSEENPPYSYYLYYM 308 (496)
T ss_pred cCCcCCHHHHHHHHHHHHHHHhcCcccCHHHHHHHHhCCceEEEcCCCc-cccCCCcCCCChhcCCCCCCCCceeeHHHH
Confidence 9999999999999999999999999999999999999999999999999 668899999999999999999999999999
Q ss_pred HHHhhhchhhhhhcCCCCccccCCCChhh-------h-----------hccCCcchhhhHhccCceEEEEecCccccccc
Q psy47 808 YANLTVLNQSTGRRSRRETNLQPGAYKAD-------A-----------LTSKFPNAQDIYDHEITIRIAMSPLSNNSLFL 869 (1001)
Q Consensus 808 ~ANi~~LN~~Rr~~GL~t~~lt~HaGEaG-------~-----------lLr~~P~LqyLyy~e~qIpLEvCPlSN~~l~~ 869 (1001)
||||++||++|+++|+|||.|||||||+| + .+.++|.|+++||. +||||||||+||+.+..
T Consensus 309 yaNi~~LN~~R~~rglntf~~r~HaGE~g~~~~l~~alL~adRIGHGv~l~~dp~L~~l~~~-~qI~levCPlSN~~l~~ 387 (496)
T cd01319 309 YANITTLNSFRKARGFNTFVLRPHCGEAGDIDHLASAFLLAHGISHGINLRKVPVLQYLYYL-TQIGIAMSPLSNNSLFL 387 (496)
T ss_pred HHHHHHHHHHHHHcCCCCcceeeecCCCCChHHHHHHhhcCcccccccccCCCHHHHHHHHH-cCCeEEEecCccHhhhc
Confidence 99999999999999999999999999996 1 12468999998776 89999999999998877
Q ss_pred cccCCChHHHHHCCCcEEEcCCCccccCCCCCChHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCChhhhc-cccCcCcC
Q psy47 870 NYHRNPLPEYLARGLVVSLSTDDPLQFHFTKEPLMEEYSIAAQVWKLSSCDMCELARNSVLMSGFPHGVAG-WDLPDVPN 948 (1001)
Q Consensus 870 ~y~~HPf~~~~~~Gl~VsLsTDDPl~F~~T~t~L~eEY~iAa~~~~Ls~~DL~eLArNSV~~Sf~~~~~K~-~Lg~~~~~ 948 (1001)
+|.+|||+.|+++|++||||||||++||+|++||++||++|++.|+||.+|||+||+|||.+||+++++|+ |+|..|..
T Consensus 388 ~~~~HP~~~~l~~Gl~VsInTDDPl~f~~t~~~L~eEY~~a~~~~~Ls~~Dl~eLarNSV~~Sf~~~~~K~~~l~~~~~~ 467 (496)
T cd01319 388 SYEKNPFPEFFKRGLNVSLSTDDPLQFHFTKEPLMEEYSIAAQVWKLSTCDMCELARNSVLQSGFEHSIKRHWLGPNYLK 467 (496)
T ss_pred CcccChHHHHHHCCCeEEEeCCCchhhCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHhCCCHHHHHHHHHHHhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999 99998877
Q ss_pred CCc
Q psy47 949 AGH 951 (1001)
Q Consensus 949 ~g~ 951 (1001)
.|.
T Consensus 468 ~~~ 470 (496)
T cd01319 468 RGV 470 (496)
T ss_pred cCC
Confidence 554
No 7
>PTZ00310 AMP deaminase; Provisional
Probab=100.00 E-value=1.7e-110 Score=1021.44 Aligned_cols=440 Identities=29% Similarity=0.455 Sum_probs=416.1
Q ss_pred CCHHHHhhhccccccchhhhhHHhhcCcc----hHHHHHHHHhhcCc-cccChhhhhccccccccCcccccccccccccc
Q psy47 488 MTLRQVFQSMNLTSYDLTVDMLDVHADRN----TFHRFDKFNAKYNP-IGESRLREVFLKTDNYLGGTYFARIIKVDTHI 562 (1001)
Q Consensus 488 pt~~ef~~D~~~~~~dl~vdll~~~~~gp----~~kRL~~L~~Kf~L-~~lN~~~E~~~~~~k~~~~rDFyn~pKVDlHi 562 (1001)
|||++|++|++. |++++++|| |++||+||++||+| ++||+.+|.. +++..+|||||||||||+|+
T Consensus 143 p~~~~F~~D~~~--------l~~~v~~g~~ks~c~~RL~~Le~Kf~L~~llN~~~E~~--~~~~~~~~dFyn~rKVDthv 212 (1453)
T PTZ00310 143 PPWEQYVRDVQA--------VYLTVGNGPCLSACRHRLTIIQERSRMFFLLNAEIEER--ADLYKAGGVFSPCTKVDNAV 212 (1453)
T ss_pred CCHHHHHHHHHH--------HHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHchhhhhh--cCcCCCCCceeecceeeccc
Confidence 999999999999 999999999 99999999999999 9999999998 88999999999999999999
Q ss_pred cccCCCCHHHHHHHHHHHhccCCCcEEEECCCCcccCHHHHHHhcCCC-ccccccccccccc--CcccccccchhhcccC
Q psy47 563 HAASCMNQKHLLRFIKKTLKNHTDEVVTKDRTGQTMTLRQVFQSMNLT-SYDLTVDMLDVHA--DRNTFHRFDKFNAKYN 639 (1001)
Q Consensus 563 Hlsg~msqk~LlefI~~k~~~~~~~iV~~~~~g~~~TL~evF~~~~l~-~~dltvd~Ldv~a--d~~~f~rFd~Fn~kY~ 639 (1001)
|||||||||||++|||+|++++||++|+.+ +|+++||+|+|+++|++ +++||+|+|+||+ ++++|||||+||.| |
T Consensus 213 h~sacMnqk~LLrFIk~kl~~epd~vV~~~-~Gk~~TL~evFesl~lt~~~dLTVd~Ldvha~~drntfhrFDkFn~K-N 290 (1453)
T PTZ00310 213 LLSTSVDAQELLEFVVTTYREQPRAPLRLR-DGSNSTLREYLEAHGVRDPRELTVEGLGWQPTKYRNKYGQYDLFDAK-N 290 (1453)
T ss_pred chhccCCHHHHHHHHHHHHhcCCCcEEEcC-CCccccHHHHHHhcCCCCccccchhhcCCcccccccccccccccccc-C
Confidence 999999999999999999999999999988 59999999999999996 9999999999999 78999999999999 9
Q ss_pred Ccch--hHHHHHhhhhccCCCHHHHHHHHHHHHHHHHHcccc--eEEEEEeccCCChhHHHHHHHHHHHhCccc-cceee
Q psy47 640 PIGE--SRLREVFLKTDNYLGGTYFARIIKEVAADLEESKYQ--NAELRLSIYGKSEDEWDKLATWAIESNVYS-NNIRW 714 (1001)
Q Consensus 640 p~g~--~~Lr~iFlktdn~i~geYfa~iikEvi~dle~~k~q--YaElR~siyG~s~~ew~~la~w~~~~~l~s-~~vRw 714 (1001)
|+|+ ++||++||+| +|.|||+++|+|+.++|++||| ++|+|+||||++.+||++||+|+++|++.| .+|||
T Consensus 291 P~G~~~s~LReiFLkT----~G~y~a~liK~vi~~lE~sKyQ~q~~E~rlSIYGr~~~EW~kLA~Wvv~~~l~s~~nvRW 366 (1453)
T PTZ00310 291 PMGALGAELRQSFLSL----HGNLCGKLLRRELERREYQKQQPQATEYSLPLYGHHPEELTDLAEWVRRQGFGPFSRNRW 366 (1453)
T ss_pred CCccchhHHHHHHHhc----CcHHHHHHHHHHHHHHHhccccceeeEEEEEEeCCChhHHHHHHHHHHHCCCCccCCceE
Confidence 9999 9999999999 5899999999999999999997 699999999999999999999999999986 69999
Q ss_pred EEEeccchhH---HHhhHHHHHHHHHHHhhcccccccccCCCC--chhhhhhcccceeEEeecCCCCCCCCCCccCCCCC
Q psy47 715 LIQIPRLYDI---FKSNKLINNFQEILQNIFKPLFEVTNDSSS--HPHLHKFLQYVIGFDSVDDESKPENPLFDADVLTP 789 (1001)
Q Consensus 715 lIqIpR~y~~---~~a~~~v~~f~e~L~nIF~PLf~at~~p~~--~~eL~~fl~~VvGfDLvgdEs~~~~~~f~~~~~~P 789 (1001)
+||| .|.. +...+.+.+||++|+|||.|||+||++|++ ||+|+.||++|+|||+++||+. .++.|..+.++|
T Consensus 367 lIQI--vyk~~~~~~~~~~v~nFqd~LdNIF~PLFeaTl~P~~~~~p~L~~FLq~V~GfDvvdde~~-~~~~f~~~~p~P 443 (1453)
T PTZ00310 367 ILAI--SFKELGPFQVPSSCTTVQDQLDNIFLPLFKATLCPSDPQWSDVAWLLCQVGGLQILTHAVV-RSEDFDETAPDP 443 (1453)
T ss_pred EEEE--EEeccccccccccccCHHHHHHHHHHHHHHHhcCcCcCCCHHHHHHHHhcCceeecCCCcc-cccccCCCCCCc
Confidence 9999 4432 222457999999999999999999999986 7999999999999998888865 456788888999
Q ss_pred CCCCCCCCCchhHHHHHHHHHhhhchhhhhhcCCCCccccCCCChhh------------------hhccCCcchhhhHhc
Q psy47 790 PQWNLEENPCYAYYQYYTYANLTVLNQSTGRRSRRETNLQPGAYKAD------------------ALTSKFPNAQDIYDH 851 (1001)
Q Consensus 790 ~~w~~~~nPp~~y~~~y~~ANi~~LN~~Rr~~GL~t~~lt~HaGEaG------------------~lLr~~P~LqyLyy~ 851 (1001)
++|+.++||||+||+||+||||++||+||+++|+|||.|||||||+| +.++++|.|+|+||.
T Consensus 444 ~~w~~~~NPPyaYY~YYmyANl~~LN~lR~~RGlNTf~LRPhcgeag~~dhLv~~fLladRI~HGi~l~d~p~LqyL~~e 523 (1453)
T PTZ00310 444 DQVPYTAKCSDLYYFYYVYANLAVLNSLRKRKGLNTLQLRPSGEKAPAYDQLISSYLLGDVITRATSIADYPVLQYLCGL 523 (1453)
T ss_pred ccccCCCCCChhhhHHHHHHHHHHHHHHHHhCCCCeEEecCCCCCCCCHHHHHHHHHhhccccchhccCchHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999996 123568999999776
Q ss_pred cCceEEEEecCcccccc-ccccCCChHHHHHCCCcEEEcCCCccccCCCCCChHHHHHHHHHHcCCCHHHHHHHHHHHHH
Q psy47 852 EITIRIAMSPLSNNSLF-LNYHRNPLPEYLARGLVVSLSTDDPLQFHFTKEPLMEEYSIAAQVWKLSSCDMCELARNSVL 930 (1001)
Q Consensus 852 e~qIpLEvCPlSN~~l~-~~y~~HPf~~~~~~Gl~VsLsTDDPl~F~~T~t~L~eEY~iAa~~~~Ls~~DL~eLArNSV~ 930 (1001)
+||||||||+||+.|+ .+|.+|||+.|+++|++||||||||++||.|++||++||++|++.||||.+|||+||+|||.
T Consensus 524 -~qI~LeVCPlSN~~l~v~sy~~HPi~~fl~~GL~VSLNTDDPl~F~tt~EpL~EEY~iaaq~~gLS~~DL~eLarNSV~ 602 (1453)
T PTZ00310 524 -HRVGLTVSPLRDHALSITAYFDHPLPKFLHRCLRVSISTSDPLYFHHHSQPLIEEYATAMKLFSLSPLDTTELARNSVL 602 (1453)
T ss_pred -cCCeEEECCCcccccCCCchhhCcHHHHHHCCCEEEECCCCccccCCCCccHHHHHHHHHHHhCcCHHHHHHHHHHHHH
Confidence 9999999999999999 59999999999999999999999999999889999999999999999999999999999999
Q ss_pred HcCCChhhhc-cccCcCc
Q psy47 931 MSGFPHGVAG-WDLPDVP 947 (1001)
Q Consensus 931 ~Sf~~~~~K~-~Lg~~~~ 947 (1001)
+||+++++|+ |++..|.
T Consensus 603 aSf~~~e~K~~lLg~l~~ 620 (1453)
T PTZ00310 603 NSSFPPEVKQQWLGERFQ 620 (1453)
T ss_pred HhCCCHHHHHHHHHHhcc
Confidence 9999999999 9999887
No 8
>KOG1096|consensus
Probab=100.00 E-value=2.2e-82 Score=723.65 Aligned_cols=434 Identities=37% Similarity=0.540 Sum_probs=350.6
Q ss_pred CCCCCccCCCcCCC-CchhhHHHHHH-HHHHHHHHH---HhhhhhhcccCCCCCCC------CC-Cccccc--ccccccc
Q psy47 45 ELPNEISAPYEVPQ-FPIEQIEKKLA-IQQRMSQLL---AKDLEDRKSQYEPSLVP------GV-EDIETT--AVIDEHD 110 (1001)
Q Consensus 45 ~~~~~~saPfevpe-~PIeq~E~k~~-iqrq~s~~~---~~~~~~~~~~~~~~~~~------~~-~~~~~~--~~~~~~~ 110 (1001)
+.+.+.|+++.+++ |||++.|++.+ ..+++...- +++....++++.+...+ .. .+.... ...+...
T Consensus 44 ~~~~~~~~~~~~~~~~p~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~d~~~~~~~~s~~~~~~~~~~~~~~ 123 (768)
T KOG1096|consen 44 DDSKSESASSMDIESFPIEQNEQRAHQGPKFLALEGARLEKDSLGPRSQSFSKSESDSEVQSYTLSDSKQGITLFTPRDQ 123 (768)
T ss_pred cccccccCCccCcccCCchhHHHHHhcchhhhhhhhhhhcCCCCCccccccccccCcccccccCccccccccccCCchhh
Confidence 44677889999999 99999999986 666665442 22333444443221111 00 000000 1123334
Q ss_pred ccCCceeeeeccccCCCCChhhHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHhccCCCCCCCCccccccccccc-c
Q psy47 111 FVPHFQRVAISGEDNTGVPAEDLEQASRLLVEALHIRDRYMDISSQTFPQVTARFLREMDNVASLPHSTKIVHEDKKT-I 189 (1001)
Q Consensus 111 ~~~~fQRV~IsGe~~~GVpleDL~~Aak~L~~AL~iRekYM~~s~q~Fp~TT~~fL~~~~~~~~~~~~~~~~~~~~~~-~ 189 (1001)
..++||||+|+|++++|||.|||.+|+++|.+||+||+|||+.|.|+||.||++++++.... ....+ ..+..+.++ +
T Consensus 124 ~~~~~~~~~~~g~~~~~~~tedl~~~~k~l~~~l~~r~ky~~~s~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~p 201 (768)
T KOG1096|consen 124 MGVRFQRVAITGEELEGVPTEDLADASKSLAKALFLREKYMRISLQRFPDTTRNYLSGLAYP-LPKYY-YNESYDTKSHP 201 (768)
T ss_pred hccchheeeccCcccCCCCHHHHHHHHhhhHHHHHHHHHHhhhhhhcCCcccccccCCCCCC-CcccC-cccccccccCC
Confidence 68999999999999999999999999999999999999999999999999999999998764 22211 111111111 0
Q ss_pred c-----ccC--CCCCCCCCCCCCC-------ccccccccccccccccCCCCChhhHHHHHHH--HHHHHhh-----hh--
Q psy47 190 A-----DTD--KHFKPSDNDSSTG-------QVAPLWRYKTISNLSNEKSVPAEDLEQASRL--LVEALHI-----RD-- 246 (1001)
Q Consensus 190 ~-----~~~--~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~lP~~dle~~~~~--~~~al~i-----r~-- 246 (1001)
. +++ .++.+.+++...+ +|+.++...+......|..+|+|+|++|..| .+.|+|. +.
T Consensus 202 p~~~~~~~~~~~~~~~~~~~~~~~~~l~m~~~v~~v~~~~~~~~~~~~~~~~iPt~~ef~~D~~~ll~lI~dgp~ksf~~ 281 (768)
T KOG1096|consen 202 PGKGNPPGEYFEPFDPEDPGEKLDYHLRMQDGVVHVYYDGKEDSHAEEVLLPIPTLQEFRDDFEKLLALIADGPLKSFCH 281 (768)
T ss_pred cccCCCCccccccccccccCcccceEEEecCCeeEeecCCchhhhccCcCCCCCcHHHHHHHHHHHHHHHhcCChhHHHH
Confidence 0 001 1233444443332 7788888889999999999999999999999 4777765 11
Q ss_pred -cccccccccchhhHHHHHhhhhccccCCCCccccCCCcccccccCCccCCCCC--------------------------
Q psy47 247 -RYMDISSQTFPQVTARFLREMDNVASLPHSTKIVHEDKKTIADTDKHFKPSDN-------------------------- 299 (1001)
Q Consensus 247 -~y~~lss~~f~~~~~~lLnem~El~~q~~~~~~~~~~~~~~rk~d~~~~~~~~-------------------------- 299 (1001)
|+.+|.+ ||+ +|++||||+|+++||. +|||||||+||||||||+|.|
T Consensus 282 RRLqyLe~-KF~--l~~~LNe~~El~~~K~---vPHRDFYNvRKVDthih~SaCmnQkhLlrFIk~klr~epdrvV~~~~ 355 (768)
T KOG1096|consen 282 RRLQYLES-KFQ--LHQLLNEKKELLAQKK---VPHRDFYNVRKVDTHIHASACMNQKHLLRFIKKKLRKEPDRVVIQRD 355 (768)
T ss_pred HHHHHHHH-HhH--HHHHHHHHHHHHHhcC---CCcccccccchhcchhhHhhhcCHHHHHHHHHHHhhcCCceEEEecC
Confidence 4444455 898 9999999999999998 999999999999999999999
Q ss_pred --CCCccccc---cCCCcCCCCcccccccCCccccccccccccCCCCCchhhhhhhhccCCCCCcchHHHHHHHHHHhhh
Q psy47 300 --DSSTGQVA---PLWRYKTISNLSNEKSDRNTFHRFDKFNAKYNPIGESRLREVFLKTDNYLGGTYFARIIKEVAADLE 374 (1001)
Q Consensus 300 --~~~~~~~~---~~~~~~~~~d~l~~~a~~~~f~rfd~fn~kynp~g~~~lr~iflk~dn~i~G~y~Ae~~k~v~~~le 374 (1001)
.+||.||| .+++|||+||+|||||+++|||||||||+||||+|+|+||+|||||||||+|+|||||+|+|+.|||
T Consensus 356 g~~lTLrevF~~l~L~~yDlsvd~ldvha~~~tfHrfdkfn~Kynp~g~s~LR~iFLktDNyI~GeYlAei~Kev~~dle 435 (768)
T KOG1096|consen 356 GRKLTLREVFKSLGLTAYDLSVDTLDVHADRNTFHRFDKFNAKYNPVGESRLREIFLKTDNYINGEYLAEILKEVLSDLE 435 (768)
T ss_pred CceeeHHHHHHHcCCceeccchhHHHhhhchhhhhccchhhhhcCCccHHHHHHHHHhhccccchhhHHHHHHHHHhhHH
Confidence 36999999 5788999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhccccceeeeeeecCChhHHHHHhhhHhhCcccCCCceeeeccCceeeeccccchhhhHHHHHHhhccccccccccCCc
Q psy47 375 ESKYQNAELRLSIYGKSEDEWDKLATWAIESNVYSNNIRWLIQIPRLYDIFKSNKLINNFQEILQNIFKPLFEVDTHIHA 454 (1001)
Q Consensus 375 ~skyq~~e~r~siyg~~~~eW~~la~W~~~~~~~s~n~rW~iqiprly~~~~~~~~v~~F~~~l~niF~Plfe~~~~~h~ 454 (1001)
+||||+||+||||||||++||++||.|+++|+|+|+||||+|||||+|++||++|+|+|||+||+|||.||||||.||.
T Consensus 436 eSKYQ~ae~rlsiygrs~~EW~klA~W~v~~~v~S~NvRWlIQipRiydvy~~~g~v~nFqe~L~nIF~PLFeat~~p~- 514 (768)
T KOG1096|consen 436 ESKYQLAEPRLSIYGRSRDEWDKLASWLVDNKVFSPNVRWLIQIPRLYDVYRKKGIVKNFQEMLDNIFLPLFEATKDPS- 514 (768)
T ss_pred HhhhhhcceeEEEeeeCHHHHHHHHHHHHHccccCCCeeEEEecchHhHHHHhcCchhhHHHHHHHHhhhhhhcccCCC-
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999877
Q ss_pred ccccchhHHHHHHHHhhccCCccccccCCCCCCCCHHHHhhhc
Q psy47 455 ASCMNQKHLLRFIKKTLKNHTDEVVTKDRTGQTMTLRQVFQSM 497 (1001)
Q Consensus 455 ~~~m~~~~l~~f~~~~~~~~~de~v~~~~~~~~pt~~ef~~D~ 497 (1001)
.||+|+-||+++.. .|- |.++ .-+.|+.|.+-.
T Consensus 515 ----~hp~Lh~FL~~V~g--fDs-VdDe---sk~~~~~Ft~~s 547 (768)
T KOG1096|consen 515 ----SHPELHVFLQQVSG--FDS-VDDE---SKYEWKNFTRKS 547 (768)
T ss_pred ----cchHHHHHHHHhcC--ccc-cccc---ccccccccccCC
Confidence 68999999999986 444 3433 225555555433
No 9
>PLN03055 AMP deaminase; Provisional
Probab=100.00 E-value=5e-75 Score=673.90 Aligned_cols=307 Identities=34% Similarity=0.581 Sum_probs=257.4
Q ss_pred CChhhHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHhccCCCCCCCCcccccccccccccccCCCCCCCCCCCCCC-
Q psy47 128 VPAEDLEQASRLLVEALHIRDRYMDISSQTFPQVTARFLREMDNVASLPHSTKIVHEDKKTIADTDKHFKPSDNDSSTG- 206 (1001)
Q Consensus 128 VpleDL~~Aak~L~~AL~iRekYM~~s~q~Fp~TT~~fL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 206 (1001)
+|-.+-+++++.|.++|.+|+||+-. .-+.-+ +...++ +.++.....||.-.+ ++..+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~-~~~~~~-------------~~~~~~~~~~~~~~~-~~~~~~ 61 (602)
T PLN03055 3 APSDEEEEVCAMMQECLELRDKYLFR------EKLPPW-RKGIFE-------------SSTSKPNPDPFRYEP-EPPSQH 61 (602)
T ss_pred CCChHHHHHHHHHHHHHHhhhhhccc------CCCCcc-ccCCCC-------------CCCCCCCCCCCCCCC-CCCCCe
Confidence 56677889999999999999999721 111111 111111 111122233443222 22233
Q ss_pred ------ccccccccccccccccCCCCChhhHHHHHHHH--HHHHhh----------hhcccccccccchhhHHHHHhhhh
Q psy47 207 ------QVAPLWRYKTISNLSNEKSVPAEDLEQASRLL--VEALHI----------RDRYMDISSQTFPQVTARFLREMD 268 (1001)
Q Consensus 207 ------~~~~~~~~~~~~~~~~~~~lP~~dle~~~~~~--~~al~i----------r~~y~~lss~~f~~~~~~lLnem~ 268 (1001)
||+.||..+.. .+..+|.|++++|..|+ +.+++. |++|+ .+ ||+ ||.+||+..
T Consensus 62 ~~~~~~gv~~v~~~~~~----~~~~~~~p~~~~f~~D~~~l~~~~~~g~~~s~~~~RL~~L--e~-kf~--L~~~lN~~~ 132 (602)
T PLN03055 62 VFRMVDGVMHVYAPDDA----KEELFPVPDATTFFTDMHRILRIVSLGNVRTFCHHRLKLL--EQ-KFS--LHLMLNADR 132 (602)
T ss_pred eEEEeCCEEEEecCCcC----CCcCCCCCCHHHHHHHHHHHHHHHhCcchHHHHHHHHHHH--HH-HHH--HHHHHhhhh
Confidence 78888776432 33478999999999984 444422 44444 34 787 999999999
Q ss_pred ccccCCCCccccCCCcccccccCCccCCCCC----------------------------CCCcccccc---CCCcCCCCc
Q psy47 269 NVASLPHSTKIVHEDKKTIADTDKHFKPSDN----------------------------DSSTGQVAP---LWRYKTISN 317 (1001)
Q Consensus 269 El~~q~~~~~~~~~~~~~~rk~d~~~~~~~~----------------------------~~~~~~~~~---~~~~~~~~d 317 (1001)
|.+++|. +|||||||+||||||||++.| .+||+|||+ .++|||+||
T Consensus 133 E~~~~k~---~p~rDFyn~rKVDthvh~s~cm~qk~LL~FIk~k~~~~pd~vV~~~~gk~~TL~evfe~l~~~~~dLtVd 209 (602)
T PLN03055 133 EFLAQKS---APHRDFYNVRKVDTHVHHSSCMNQKHLLRFIKSKLRKEPDEVVIFRDGKYLTLREVFESLDLTGYDLNVD 209 (602)
T ss_pred HHHHhcc---CCCCCceeeeEeeccccccccCCHHHHHHHHHHHHHcCCCcEeecCCCcchhHHHHHHHcCCCcccCccc
Confidence 9999988 999999999999999999998 359999994 788999999
Q ss_pred ccccccCCccccccccccccCCCCCchhhhhhhhccCCCCCcchHHHHHHHHHHhhhhhccccceeeeeeecCChhHHHH
Q psy47 318 LSNEKSDRNTFHRFDKFNAKYNPIGESRLREVFLKTDNYLGGTYFARIIKEVAADLEESKYQNAELRLSIYGKSEDEWDK 397 (1001)
Q Consensus 318 ~l~~~a~~~~f~rfd~fn~kynp~g~~~lr~iflk~dn~i~G~y~Ae~~k~v~~~le~skyq~~e~r~siyg~~~~eW~~ 397 (1001)
+||||||++||||||+||+||||+|+++||+|||||||+|+|||||||||+||++||+||||+||+||||||++++||++
T Consensus 210 ~Ldvha~~~~fhrfD~fn~kynp~g~s~Lr~iFLktdN~i~G~YlAel~k~v~~~le~skyQ~~E~rlsiYG~~~~EW~k 289 (602)
T PLN03055 210 LLDVHADKNTFHRFDKFNLKYNPCGQSRLREIFLKQDNLIQGRFLAELTKEVFSDLEASKYQMAEYRISIYGRKQSEWDQ 289 (602)
T ss_pred ccCccCCCCcccccccccccCCccchHHHHHHHcCcCCCcchhhHHHHHHHHHHHHHhccceeEEEEEEEeCCCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhHhhCcccCCCceeeeccCceeeeccccchhhhHHHHHHhhccccccccccCCcccccchhHHHHHHHHhhc
Q psy47 398 LATWAIESNVYSNNIRWLIQIPRLYDIFKSNKLINNFQEILQNIFKPLFEVDTHIHAASCMNQKHLLRFIKKTLK 472 (1001)
Q Consensus 398 la~W~~~~~~~s~n~rW~iqiprly~~~~~~~~v~~F~~~l~niF~Plfe~~~~~h~~~~m~~~~l~~f~~~~~~ 472 (1001)
||+|+++|||+|+||||+|||||+|++||+.|.|+|||+||+|||.||||||++|. .||+|+.||+++.+
T Consensus 290 LA~W~~~~~l~s~n~rW~IqiPRly~~~~~~g~v~~Fqd~L~NIF~PLFeatl~P~-----~hp~L~~fL~~v~g 359 (602)
T PLN03055 290 LASWIVNNRLYSENVVWLIQLPRLYNVYKEMGIVQSFQQILDNIFKPLFEVTVDPS-----SHPQLHVFLKMVVG 359 (602)
T ss_pred HHHHHHHcCcCCCCceEEEecCcchhhhhcCCCcCCHHHHHHHHHHHHHHHHcCcc-----cCHHHHHHHHhcCC
Confidence 99999999999999999999999999999999999999999999999999999988 48999999999986
No 10
>PLN02768 AMP deaminase
Probab=100.00 E-value=4e-73 Score=666.18 Aligned_cols=321 Identities=36% Similarity=0.591 Sum_probs=272.2
Q ss_pred cCCceeeeeccccCCCCChhhHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHhccCCCCCCCCcccccccccccccc
Q psy47 112 VPHFQRVAISGEDNTGVPAEDLEQASRLLVEALHIRDRYMDISSQTFPQVTARFLREMDNVASLPHSTKIVHEDKKTIAD 191 (1001)
Q Consensus 112 ~~~fQRV~IsGe~~~GVpleDL~~Aak~L~~AL~iRekYM~~s~q~Fp~TT~~fL~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (1001)
..+||||.|+| .|||++|+++|++.|.+||.||+||| |..++..+.... ..++.++..
T Consensus 222 ~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~r~ky~------~~~~~~~~~~~~-------------~~~~~~~~~ 279 (835)
T PLN02768 222 QETFVRLNITP---LEVPSPDEVEAYKVLQECLELRKRYV------FREEVAPWEKEI-------------ISDPSTPKP 279 (835)
T ss_pred hhhhhcccccc---CCCccHHHHHHHHHHHHHHHHHHHHc------cCCCCCCccccc-------------cCCCCCCCC
Confidence 44899999999 56999999999999999999999999 422222221110 011112222
Q ss_pred cCCCCCCCCCCCCC-------CccccccccccccccccCCCCChhhHHHHHHHH--HHHHhh----------hhcccccc
Q psy47 192 TDKHFKPSDNDSST-------GQVAPLWRYKTISNLSNEKSVPAEDLEQASRLL--VEALHI----------RDRYMDIS 252 (1001)
Q Consensus 192 ~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~lP~~dle~~~~~~--~~al~i----------r~~y~~ls 252 (1001)
...+|+- .++... +||++||..+. ..+..+|+|++++|..|+ +.+++. |++|+ .
T Consensus 280 ~~~~~~~-~~~~~~~~~~~~~~gv~~v~~~~~----~~~~~~p~~~~~~F~~D~~~l~~~i~dg~~ksfc~~RL~~L--e 352 (835)
T PLN02768 280 NPNPFSY-TPEGKSDHYFEMQDGVVHVYANKD----SKEELFPVADATTFFTDLHHILRVIAAGNIRTLCHHRLNLL--E 352 (835)
T ss_pred CCCCccc-CCCCCCCeEEEecCCEEEEeeCCC----CCcccCCCCCHHHHHHHHHHHHHHHhCchHHHHHHHHHHHH--H
Confidence 2333432 122222 27888886654 344568999999999984 333322 44444 4
Q ss_pred cccchhhHHHHHhhhhccccCCCCccccCCCcccccccCCccCCCCC----------------------------CCCcc
Q psy47 253 SQTFPQVTARFLREMDNVASLPHSTKIVHEDKKTIADTDKHFKPSDN----------------------------DSSTG 304 (1001)
Q Consensus 253 s~~f~~~~~~lLnem~El~~q~~~~~~~~~~~~~~rk~d~~~~~~~~----------------------------~~~~~ 304 (1001)
+ ||+ ||.+||+..|.+++|. +|||||||+||||||||.+.| .+||+
T Consensus 353 ~-Kf~--Lh~lLN~~~E~~~~K~---~phrDFYnvrKVDthvh~sacMnqk~LLrFIk~kl~~epd~vV~~~dGk~~TL~ 426 (835)
T PLN02768 353 Q-KFN--LHLMLNADREFLAQKS---APHRDFYNVRKVDTHVHHSACMNQKHLLRFIKSKLRKEPDEVVIFRDGTYLTLK 426 (835)
T ss_pred H-HHH--HHHHhcchhhhHhhcc---CCCCCceeeeEeeccchhhccCCHHHHHHHHHHHHhcCCCceeeccCCccccHH
Confidence 4 787 9999999999999988 999999999999999999998 35999
Q ss_pred ccc---cCCCcCCCCcccccccCCccccccccccccCCCCCchhhhhhhhccCCCCCcchHHHHHHHHHHhhhhhccccc
Q psy47 305 QVA---PLWRYKTISNLSNEKSDRNTFHRFDKFNAKYNPIGESRLREVFLKTDNYLGGTYFARIIKEVAADLEESKYQNA 381 (1001)
Q Consensus 305 ~~~---~~~~~~~~~d~l~~~a~~~~f~rfd~fn~kynp~g~~~lr~iflk~dn~i~G~y~Ae~~k~v~~~le~skyq~~ 381 (1001)
||| ++++|+|+||+|||||+++||||||+||+||||+|+++||+|||||||+|+|||||||||+||++||+||||+|
T Consensus 427 evFe~l~lt~ydLsVD~Ldvha~~~tfhRfDkFn~kynP~G~s~LReiFLktDN~i~GrYfAELiK~V~~dlE~sKyQ~a 506 (835)
T PLN02768 427 EVFESLDLTGYDLNVDLLDVHADKSTFHRFDKFNLKYNPCGQSRLREIFLKQDNLIQGRFLAELTKQVFSDLEASKYQMA 506 (835)
T ss_pred HHHHHcCCcccCCcccccccCCCccccccccccccccCccchHHHHHHHcCcCCCCChhhHHHHHHHHHHHHHhccceee
Confidence 998 57889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeeeeecCChhHHHHHhhhHhhCcccCCCceeeeccCceeeeccccchhhhHHHHHHhhccccccccccCCcccccchh
Q psy47 382 ELRLSIYGKSEDEWDKLATWAIESNVYSNNIRWLIQIPRLYDIFKSNKLINNFQEILQNIFKPLFEVDTHIHAASCMNQK 461 (1001)
Q Consensus 382 e~r~siyg~~~~eW~~la~W~~~~~~~s~n~rW~iqiprly~~~~~~~~v~~F~~~l~niF~Plfe~~~~~h~~~~m~~~ 461 (1001)
|+||||||++++||++||+|+++|+|+|+||||+|||||+|++||++|.|+|||+||+|||.||||||++|. .||
T Consensus 507 E~RlsIYGr~~~EW~kLA~W~v~~~l~S~nvRWlIQIPRlY~i~k~~g~v~nFqd~L~NIF~PLFeATl~P~-----~hp 581 (835)
T PLN02768 507 EYRISIYGRKQSEWDQLASWIVNNELYSENVVWLIQLPRLYNVYKEMGIVTSFQNILDNIFIPLFEVTVDPD-----SHP 581 (835)
T ss_pred EEEEEecCCCHHHHHHHHHHHHHcCCCCCCceEEEEcccchhhhhcCCccCCHHHHHHHHHHHHHHHhcCCc-----cCH
Confidence 999999999999999999999999999999999999999999999999999999999999999999999998 689
Q ss_pred HHHHHHHHhhc
Q psy47 462 HLLRFIKKTLK 472 (1001)
Q Consensus 462 ~l~~f~~~~~~ 472 (1001)
+|+.||+++..
T Consensus 582 ~L~~FL~~V~G 592 (835)
T PLN02768 582 QLHVFLKQVVG 592 (835)
T ss_pred HHHHHHHhcCC
Confidence 99999999985
No 11
>TIGR01429 AMP_deaminase AMP deaminase. This model describes AMP deaminase, a large, well-conserved eukaryotic protein involved in energy metabolism. Most members of the family have an additional, poorly alignable region of 150 amino acids or more N-terminal to the region included in the model.
Probab=100.00 E-value=2e-73 Score=662.37 Aligned_cols=331 Identities=38% Similarity=0.637 Sum_probs=280.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHhccC-CCCCCCCcccccccccccccccCCCCCC-CCCCC-CC--
Q psy47 131 EDLEQASRLLVEALHIRDRYMDISSQTFPQVTARFLREMD-NVASLPHSTKIVHEDKKTIADTDKHFKP-SDNDS-ST-- 205 (1001)
Q Consensus 131 eDL~~Aak~L~~AL~iRekYM~~s~q~Fp~TT~~fL~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~-- 205 (1001)
|||++||+.|.+||.||+|||++|.|+||.||++|++... +.+..+.. ........+..+..++.. .++|. ..
T Consensus 1 ~~~~~~~~~~~~~~~~r~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (611)
T TIGR01429 1 EDLAEAAKSLAKALMLREKYARLAYHRFPDTTAQYLSHQGYPESVPLEE--GLPDFHPPPDPQEDPYCLDDDAPPIELGY 78 (611)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHhhCCCCCCCchhccCCCCCCCCCCccc--cccCcCCCCCCcCCCCcccCCCCCCCCCc
Confidence 6999999999999999999999999999999999999644 44332210 000000111111112110 11122 22
Q ss_pred -----CccccccccccccccccCCCCChhhHHHHHHHH--HHHHhh----------hhcccccccccchhhHHHHHhhhh
Q psy47 206 -----GQVAPLWRYKTISNLSNEKSVPAEDLEQASRLL--VEALHI----------RDRYMDISSQTFPQVTARFLREMD 268 (1001)
Q Consensus 206 -----~~~~~~~~~~~~~~~~~~~~lP~~dle~~~~~~--~~al~i----------r~~y~~lss~~f~~~~~~lLnem~ 268 (1001)
+||+.||..+.......+..+|+|++++|..|+ +.+++. |++|+ .+ ||+ ||.+||+..
T Consensus 79 ~~~~~~gv~~v~~~~~~~~~~~~~~~~~~~~~~f~~D~~~l~~~~~~g~~~s~~~~RL~~L--e~-kf~--L~~llN~~~ 153 (611)
T TIGR01429 79 LVRMHGGVLFVYDNDTMLERQEPHFLVPPTLKTYYVDMEHLLALISDGPTKSFCFRRLQYL--ES-KFN--LHELLNEMS 153 (611)
T ss_pred eEEecCCEEEEEcCcchhhcCCccccCCCCHHHHHHHHHHHHHHHhCchHHHHHHHHHHHH--HH-HHH--HHHHhhhhh
Confidence 288899988887777778888999999999984 444322 44444 44 787 999999999
Q ss_pred ccccCCCCccccCCCcccccccCCccCCCCC----------------------------CCCcccccc---CCCcCCCCc
Q psy47 269 NVASLPHSTKIVHEDKKTIADTDKHFKPSDN----------------------------DSSTGQVAP---LWRYKTISN 317 (1001)
Q Consensus 269 El~~q~~~~~~~~~~~~~~rk~d~~~~~~~~----------------------------~~~~~~~~~---~~~~~~~~d 317 (1001)
|.+++|. +|||||||+||||||||+|.| .+||+|||+ +++|+||||
T Consensus 154 E~~~~k~---~p~rDFyn~rKVDthvh~s~cm~qk~LL~FIk~k~~~~pd~vV~~~~gk~~TL~evf~~l~l~~~dltvd 230 (611)
T TIGR01429 154 ELKEQKS---VPHRDFYNVRKVDTHIHAAASMNQKHLLRFIKHKLKTEPDETVIERDGKKLTLREVFDSLHLDPYDLSVD 230 (611)
T ss_pred hHHHhcc---CCCCCceeeEEeeccccccccCCHHHHHHHHHHHHHcCCCcEEecCCCccccHHHHHHHcCCChhhCcHh
Confidence 9999987 999999999999999999998 369999995 778999999
Q ss_pred ccccccCCccccccccccccCCCCCchhhhhhhhccCCCCCcchHHHHHHHHHHhhhhhccccceeeeeeecCChhHHHH
Q psy47 318 LSNEKSDRNTFHRFDKFNAKYNPIGESRLREVFLKTDNYLGGTYFARIIKEVAADLEESKYQNAELRLSIYGKSEDEWDK 397 (1001)
Q Consensus 318 ~l~~~a~~~~f~rfd~fn~kynp~g~~~lr~iflk~dn~i~G~y~Ae~~k~v~~~le~skyq~~e~r~siyg~~~~eW~~ 397 (1001)
+|||||+++||||||+||+||||+|+++||+|||||||+|+|||||||||+||++||+||||+||+||||||++++||++
T Consensus 231 ~Ldv~a~~~~fhrfd~fn~kynp~G~s~Lr~iFLktdN~i~G~YfAelik~v~~~le~skyQ~~E~rlsiyG~~~~EW~k 310 (611)
T TIGR01429 231 TLDVHADRNTFHRFDKFNLKYNPVGESRLREIFLKTDNYIGGKYFAELVKEVFTDLEDSKYQYAEPRLSIYGRSPKEWDS 310 (611)
T ss_pred hhCCcCCCCccccccccccccCccchHHHHHHHhccCCCcchhhHHHHHHHHHHHHHhcCceeEEEEEEEeCCCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhHhhCcccCCCceeeeccCceeeeccccchhhhHHHHHHhhccccccccccCCcccccchhHHHHHHHHhhccCCcc
Q psy47 398 LATWAIESNVYSNNIRWLIQIPRLYDIFKSNKLINNFQEILQNIFKPLFEVDTHIHAASCMNQKHLLRFIKKTLKNHTDE 477 (1001)
Q Consensus 398 la~W~~~~~~~s~n~rW~iqiprly~~~~~~~~v~~F~~~l~niF~Plfe~~~~~h~~~~m~~~~l~~f~~~~~~~~~de 477 (1001)
||+|+++|+|+|+||||+|||||+|++||++|.|+|||+||+|||.||||||++|. .||+|+.||+++.+ .|-
T Consensus 311 LA~W~~~~~l~s~n~rW~IqiPRly~v~k~~g~v~~Fq~~L~NIF~PLFeat~~P~-----~~p~L~~fL~~v~G--fD~ 383 (611)
T TIGR01429 311 LARWIIDHDVFSPNVRWLIQVPRLYDVYRSKKLVPNFGDMLENVFLPLFEVTKDPS-----SHPELHLFLQQVTG--FDS 383 (611)
T ss_pred HHHHHHHcCCCCCCccEEEEcchhHHHHhcCCCcCCHHHHHHHHHHHHHHHhcCCc-----cCHHHHHHHHhccc--eEE
Confidence 99999999999999999999999999999999999999999999999999999988 47999999999885 554
Q ss_pred c
Q psy47 478 V 478 (1001)
Q Consensus 478 ~ 478 (1001)
|
T Consensus 384 V 384 (611)
T TIGR01429 384 V 384 (611)
T ss_pred E
Confidence 3
No 12
>cd01319 AMPD AMP deaminase (AMPD) catalyzes the hydrolytic deamination of adensosine monophosphate (AMP) at position 6 of the adenine nucleotide ring. AMPD is a diverse and highly regulated eukaryotic key enzyme of the adenylate catabolic pathway.
Probab=100.00 E-value=1e-70 Score=631.26 Aligned_cols=231 Identities=47% Similarity=0.789 Sum_probs=213.6
Q ss_pred hhHHHHHHHHHHHH-----hhhhcccccccccchhhHHHHHhhhhccccCCCCccccCCCcccccccCCccCCCCC----
Q psy47 229 EDLEQASRLLVEAL-----HIRDRYMDISSQTFPQVTARFLREMDNVASLPHSTKIVHEDKKTIADTDKHFKPSDN---- 299 (1001)
Q Consensus 229 ~dle~~~~~~~~al-----~ir~~y~~lss~~f~~~~~~lLnem~El~~q~~~~~~~~~~~~~~rk~d~~~~~~~~---- 299 (1001)
.|++..+..+..+. ..|++|+ . +||+ ||.+||+..|.+++|. ++||||||+||||||||.+.|
T Consensus 3 ~D~~~l~~~~~~~~~~s~~~~RL~~L--~-~kf~--l~~~lN~~~E~~~~k~---~~~rdfyn~~KVD~~vh~s~cm~~k 74 (496)
T cd01319 3 LDLEFLLALISDGPAKSFCYRRLQYL--E-SKFQ--LHVLLNEDRELKEQKT---VPHRDFYNVRKVDTHVHHSACMNQK 74 (496)
T ss_pred hHHHHHHHHHhCccHHHHHHHHHHHH--H-HHHH--HHHHhhhhhhhhhccc---CCCCCceeCceecccccccccCCHH
Confidence 45666665544444 4455555 3 3787 9999999999999998 999999999999999999998
Q ss_pred ------------------------CCCcccccc---CCCcCCCCcccccccCCccccccccccccCCCCCchhhhhhhhc
Q psy47 300 ------------------------DSSTGQVAP---LWRYKTISNLSNEKSDRNTFHRFDKFNAKYNPIGESRLREVFLK 352 (1001)
Q Consensus 300 ------------------------~~~~~~~~~---~~~~~~~~d~l~~~a~~~~f~rfd~fn~kynp~g~~~lr~iflk 352 (1001)
.+||+|||+ .++|+||||+|||||+++||||||+||+||||+|+++||+||||
T Consensus 75 ~Ll~FI~~k~~~~pd~vv~~~~g~~~TL~e~f~~l~~~~~~ltvd~L~~~a~~~~~~rfd~fn~kynp~g~~~Lr~iFLk 154 (496)
T cd01319 75 HLLRFIKKKLRTEPDEVVIFRDGKKLTLKEVFDSLKLTAYDLSVDTLDVHADRNTFHRFDKFNLKYNPIGESRLREIFLK 154 (496)
T ss_pred HHHHHHHHHHHcCCCcEEECCCCccccHHHHHHHcCCChhhCchhhcCcCCCCCccccccccccccCccchHHHHHHHhc
Confidence 369999995 77899999999999999999999999999999999999999999
Q ss_pred cCCCCCcchHHHHHHHHHHhhhhhccccceeeeeeecCChhHHHHHhhhHhhCcccCCCceeeeccCceeeeccccchhh
Q psy47 353 TDNYLGGTYFARIIKEVAADLEESKYQNAELRLSIYGKSEDEWDKLATWAIESNVYSNNIRWLIQIPRLYDIFKSNKLIN 432 (1001)
Q Consensus 353 ~dn~i~G~y~Ae~~k~v~~~le~skyq~~e~r~siyg~~~~eW~~la~W~~~~~~~s~n~rW~iqiprly~~~~~~~~v~ 432 (1001)
|||+|+|||||||||+||++||+||||+||+||||||++++||++||+|+++|||+|+||||+|||||+|++|+++|.|+
T Consensus 155 tdn~~~G~y~Ael~k~v~~~le~~kyq~~E~rlsiyG~~~~Ew~~lA~W~~~~~l~s~n~rW~iqipR~y~~~~~~g~~~ 234 (496)
T cd01319 155 TDNYINGRYLAEITKEVFSDLEESKYQHAEYRLSIYGRSKDEWDKLASWVVDNDLFSPNVRWLIQIPRLYDVYKKSGIVN 234 (496)
T ss_pred cCCCcchHhHHHHHHHHHHHHHhccceeEEEEEEEeCCCHHHHHHHHHHHHHcCCCCCCceEEEecchhHHHHhhcCCcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHhhccccccccccCCcccccchhHHHHHHHHhhc
Q psy47 433 NFQEILQNIFKPLFEVDTHIHAASCMNQKHLLRFIKKTLK 472 (1001)
Q Consensus 433 ~F~~~l~niF~Plfe~~~~~h~~~~m~~~~l~~f~~~~~~ 472 (1001)
|||+||+|||.||||||++|. +||+|+.||+++.+
T Consensus 235 ~Fq~~L~nIF~PLfeat~~P~-----~~p~l~~fL~~v~g 269 (496)
T cd01319 235 SFQEMLENIFEPLFEATKDPS-----SHPELHVFLQQVIG 269 (496)
T ss_pred CHHHHHHHHHHHHHHHhcCcc-----cCHHHHHHHHhCCc
Confidence 999999999999999999988 68999999999964
No 13
>PF00962 A_deaminase: Adenosine/AMP deaminase immunodeficiency disease (SCID); InterPro: IPR001365 Adenosine deaminase (3.5.4.4 from EC) catalyzes the hydrolytic deamination of adenosine into inosine and AMP deaminase (3.5.4.6 from EC) catalyzes the hydrolytic deamination of AMP into IMP. It has been shown [] that these two enzymes share three regions of sequence similarities; these regions are centred on residues which are proposed to play an important role in the catalytic mechanism of these two enzymes.; GO: 0019239 deaminase activity, 0009168 purine ribonucleoside monophosphate biosynthetic process; PDB: 3LGG_B 3LGD_B 2AMX_B 3EWD_A 2QVN_A 2PGF_A 2PGR_A 3EWC_A 1W1I_G 1O5R_A ....
Probab=100.00 E-value=1.9e-45 Score=403.56 Aligned_cols=297 Identities=26% Similarity=0.315 Sum_probs=209.1
Q ss_pred ccccccccccccCCCCHHHHHHHHHHHhccCCCcEEEECCCCcccCHHHHHHhcCCCcccccccccccccCcccccccch
Q psy47 554 RIIKVDTHIHAASCMNQKHLLRFIKKTLKNHTDEVVTKDRTGQTMTLRQVFQSMNLTSYDLTVDMLDVHADRNTFHRFDK 633 (1001)
Q Consensus 554 n~pKVDlHiHlsg~msqk~LlefI~~k~~~~~~~iV~~~~~g~~~TL~evF~~~~l~~~dltvd~Ldv~ad~~~f~rFd~ 633 (1001)
|+||||||+||+|||++.+|++++++....++... ........+. ....+..+..
T Consensus 1 m~pK~eLH~HL~Gsi~~~~l~ela~~~~~~~~~~~-------~~~~~~~~~~------------------~~~~~~~l~~ 55 (331)
T PF00962_consen 1 MLPKAELHIHLDGSISPETLLELAKKNNICELPAD-------TDEELEKHLT------------------RPENFRSLNE 55 (331)
T ss_dssp TS-EEEEEEEGGGSS-HHHHHHHHHHCTCC-TTSC-------SSHHHHHHHH------------------CTSSCSSHHH
T ss_pred CCCEEEeeeCCccCCCHHHHHHHHHhCCCCccccc-------cchhhhhHHh------------------hhhhcccHHH
Confidence 58999999999999999999999876543322110 0000100000 0112333333
Q ss_pred hhcccCCcchhHHHHHhhhhccCCCHHHHHHHHHHHHHHHHHcccceEEEEEecc-----C--CChhH-HHHHHHHHHHh
Q psy47 634 FNAKYNPIGESRLREVFLKTDNYLGGTYFARIIKEVAADLEESKYQNAELRLSIY-----G--KSEDE-WDKLATWAIES 705 (1001)
Q Consensus 634 Fn~kY~p~g~~~Lr~iFlktdn~i~geYfa~iikEvi~dle~~k~qYaElR~siy-----G--~s~~e-w~~la~w~~~~ 705 (1001)
|...|.. ...+ +..+ ...+.++++++++++++.++||+|+|+|++|. | .+.++ .+.+.+++.+.
T Consensus 56 ~~~~~~~-----~~~~-~~~~--~~~e~~~~~~~~~l~~~~~dnV~YlElr~~P~~~~~~~~~~~~~~~~~~i~~~~~~a 127 (331)
T PF00962_consen 56 FLELFDI-----ISSV-LQAD--RTPEDLRRYAYEVLEDFAEDNVVYLELRFSPQFHAQLGGNLSFDEVVEAIIEGIDRA 127 (331)
T ss_dssp HHHHHHH-----HHHH-HTCS--TSHHHHHHHHHHHHHHHHHTTEEEEEEEESHHHHHTTTCSSTHHHHHHHHHHHHHHH
T ss_pred HHHHHHH-----hhhh-hhhc--ccHHHHHHHHHHHHHHHHHcCCeEEEEEeccccccccCCCCCHHHHHHHHHhhhhhc
Confidence 3322221 1111 1100 15679999999999999999999999999874 2 33444 45566655442
Q ss_pred -CccccceeeEEEeccchhHHHhhHHHHHHHHHHHhhcccccccccCCCCchhhhhhcc-cceeEEeecCCCCCCCCCCc
Q psy47 706 -NVYSNNIRWLIQIPRLYDIFKSNKLINNFQEILQNIFKPLFEVTNDSSSHPHLHKFLQ-YVIGFDSVDDESKPENPLFD 783 (1001)
Q Consensus 706 -~l~s~~vRwlIqIpR~y~~~~a~~~v~~f~e~L~nIF~PLf~at~~p~~~~eL~~fl~-~VvGfDLvgdEs~~~~~~f~ 783 (1001)
.-+.+.++|++++.|..+...+...++... .+.. .|||||++|+|.
T Consensus 128 ~~~~~i~~~li~~~~R~~~~~~~~~~~~~~~------------------------~~~~~~vvG~dl~g~E~-------- 175 (331)
T PF00962_consen 128 EKEFGIKVRLIISVLRHFPDEWAEEIVELAS------------------------KYPDKGVVGFDLAGDED-------- 175 (331)
T ss_dssp HHHHTTEEEEEEEEETTSTHHHHHHHHHHHH------------------------HTTTTTEEEEEEESSTT--------
T ss_pred cccccccccccccccccchHHHHHHHHHHHh------------------------hcccceEEEEEecCCcc--------
Confidence 223368999999999975544443332111 2333 799999999996
Q ss_pred cCCCCCCCCCCCCCCchhHHHHHHHHHhhhchhhhhhcCCCCccccCCCChhh--------------------hhccCCc
Q psy47 784 ADVLTPPQWNLEENPCYAYYQYYTYANLTVLNQSTGRRSRRETNLQPGAYKAD--------------------ALTSKFP 843 (1001)
Q Consensus 784 ~~~~~P~~w~~~~nPp~~y~~~y~~ANi~~LN~~Rr~~GL~t~~lt~HaGEaG--------------------~lLr~~P 843 (1001)
+.||..|...|..| ++.|++ +|+||||++ +.+.++|
T Consensus 176 ------------~~~~~~~~~~~~~a---------~~~gl~---~t~HaGE~~~~~~~~~ai~~l~~~RIgHG~~~~~~p 231 (331)
T PF00962_consen 176 ------------GGPPLKFAPAFRKA---------REAGLK---LTVHAGETGGPEHIRDAILLLGADRIGHGVRLIKDP 231 (331)
T ss_dssp ------------STTGGGHHHHHHHH---------HHTT-E---EEEEESSSSTHHHHHHHHHTST-SEEEE-GGGGGSH
T ss_pred ------------cCchHHHHHHHhhh---------ccccee---ecceecccCCcccccchhhhccceeecchhhhhhhh
Confidence 35677799999999 999999 999999994 1124589
Q ss_pred ch-hhhHhccCceEEEEecCccccccc--cccCCChHHHHHCCCcEEEcCCCccccCCCCCChHHHHHHHHHHcCCCHHH
Q psy47 844 NA-QDIYDHEITIRIAMSPLSNNSLFL--NYHRNPLPEYLARGLVVSLSTDDPLQFHFTKEPLMEEYSIAAQVWKLSSCD 920 (1001)
Q Consensus 844 ~L-qyLyy~e~qIpLEvCPlSN~~l~~--~y~~HPf~~~~~~Gl~VsLsTDDPl~F~~T~t~L~eEY~iAa~~~~Ls~~D 920 (1001)
.| +++ ++++|||||||+||+.|+. +|.+|||+.|+++|++||||||||++|+ ++|++||..|++.||||.+|
T Consensus 232 ~l~~~~--~~~~I~iEvcptSN~~~~~~~~~~~hP~~~~~~~gv~v~i~TDd~~~~~---~~l~~ey~~~~~~~~l~~~~ 306 (331)
T PF00962_consen 232 ELLELL--AERQIPIEVCPTSNVQLGAVPSYEEHPLRKLLDAGVPVSINTDDPGVFG---TTLSDEYYLAAEAFGLSLAD 306 (331)
T ss_dssp HHHHHH--HHTT-EEEE-HHHHHHTTSSSTGGG-CHHHHHHTT-EEEE--BSHHHHT----SHHHHHHHHHHHHT--HHH
T ss_pred HHHHHH--HHhCCCeeeCCCcCcccceeeecchhHHHHHHHcCCceeccCCCccccC---CCcHHHHHHHHHHcCCCHHH
Confidence 88 677 7899999999999999987 8999999999999999999999999999 88999999999999999999
Q ss_pred HHHHHHHHHHHcCCChhhhc-cccC
Q psy47 921 MCELARNSVLMSGFPHGVAG-WDLP 944 (1001)
Q Consensus 921 L~eLArNSV~~Sf~~~~~K~-~Lg~ 944 (1001)
|++|++|||++||+++++|+ |+++
T Consensus 307 l~~l~~nsi~~sf~~~~~K~~ll~~ 331 (331)
T PF00962_consen 307 LKQLARNSIEASFLSEEEKAELLAK 331 (331)
T ss_dssp HHHHHHHHHHCSSS-HHHHHHHHHC
T ss_pred HHHHHHHHHHHHcCCHHHHHHHhcC
Confidence 99999999999999999999 9863
No 14
>cd00443 ADA_AMPD Adenosine/AMP deaminase. Adenosine deaminases (ADAs) are present in pro- and eukaryotic organisms and catalyze the zinc dependent irreversible deamination of adenosine nucleosides to inosine nucleosides and ammonia. The eukaryotic AMP deaminase catalyzes a similar reaction leading to the hydrolytic removal of an amino group at the 6 position of the adenine nucleotide ring, a branch point in the adenylate catabolic pathway.
Probab=100.00 E-value=3.3e-44 Score=393.10 Aligned_cols=265 Identities=34% Similarity=0.456 Sum_probs=217.1
Q ss_pred cccccccccccCCCCHHHHHHHHHHHhccCCCcEEEECCCCcccCHHHHHHhcCCCcccccccccccccCcccccccchh
Q psy47 555 IIKVDTHIHAASCMNQKHLLRFIKKTLKNHTDEVVTKDRTGQTMTLRQVFQSMNLTSYDLTVDMLDVHADRNTFHRFDKF 634 (1001)
Q Consensus 555 ~pKVDlHiHlsg~msqk~LlefI~~k~~~~~~~iV~~~~~g~~~TL~evF~~~~l~~~dltvd~Ldv~ad~~~f~rFd~F 634 (1001)
+||||||+||+|||++.+|++++++ +
T Consensus 1 lPK~eLH~Hl~Gsi~~~~l~~l~~~----------------------~-------------------------------- 26 (305)
T cd00443 1 LPKVELHAHLSGSISPETLLELIKK----------------------E-------------------------------- 26 (305)
T ss_pred CCceeEEecCcCCCCHHHHHHHHHH----------------------H--------------------------------
Confidence 5999999999999999999999755 1
Q ss_pred hcccCCcchhHHHHHhhhhccC-CCHHHHHHHHHHHHHHHHHcccceEEEEEeccCC------ChhH-HHHHHHHHHHh-
Q psy47 635 NAKYNPIGESRLREVFLKTDNY-LGGTYFARIIKEVAADLEESKYQNAELRLSIYGK------SEDE-WDKLATWAIES- 705 (1001)
Q Consensus 635 n~kY~p~g~~~Lr~iFlktdn~-i~geYfa~iikEvi~dle~~k~qYaElR~siyG~------s~~e-w~~la~w~~~~- 705 (1001)
+.++|..+.++ .++++|++++++++++++++||+|+|+|++|++. +.++ |+.+.+.+.+.
T Consensus 27 -----------f~~~f~~~~~~l~~~~~l~~~~~~~~~~~~~d~V~Y~E~r~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (305)
T cd00443 27 -----------FFEKFLLVHNLLQKGEALARALKEVIEEFAEDNVQYLELRTTPRLLETEKGLTKEQYWLLVIEGISEAK 95 (305)
T ss_pred -----------HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCCEEEEEEcchhhcCcccCCCHHHHHHHHHHHHHHHH
Confidence 23333333333 5689999999999999999999999999999742 3333 55555554442
Q ss_pred Cccc-cceeeEEEeccchhHH----HhhHHHHHHHHHHHhhcccccccccCCCCchhhhh-hcccceeEEeecCCCCCCC
Q psy47 706 NVYS-NNIRWLIQIPRLYDIF----KSNKLINNFQEILQNIFKPLFEVTNDSSSHPHLHK-FLQYVIGFDSVDDESKPEN 779 (1001)
Q Consensus 706 ~l~s-~~vRwlIqIpR~y~~~----~a~~~v~~f~e~L~nIF~PLf~at~~p~~~~eL~~-fl~~VvGfDLvgdEs~~~~ 779 (1001)
.-++ +.+++++++.|..+.. .+... .+++. +.+.|||||++|+|..+
T Consensus 96 ~~~~~I~~~lI~~~~R~~~~~~~~~~~~~~-------------------------~~l~~~~~~~vvG~Dl~g~E~~~-- 148 (305)
T cd00443 96 QWFPPIKVRLILSVDRRGPYVQNYLVASEI-------------------------LELAKFLSNYVVGIDLVGDESKG-- 148 (305)
T ss_pred HHcCCeeEeEEEEEeCCCChhhhhhhHHHH-------------------------HHHHHHhcCCEEEEEcCCCCCCC--
Confidence 2223 7899999999999875 32222 23332 23359999999999641
Q ss_pred CCCccCCCCCCCCCCCCCCchhHHHHHHHHHhhhchhhhhhcC-CCCccccCCCChhh-------hh------------c
Q psy47 780 PLFDADVLTPPQWNLEENPCYAYYQYYTYANLTVLNQSTGRRS-RRETNLQPGAYKAD-------AL------------T 839 (1001)
Q Consensus 780 ~~f~~~~~~P~~w~~~~nPp~~y~~~y~~ANi~~LN~~Rr~~G-L~t~~lt~HaGEaG-------~l------------L 839 (1001)
.+|+..|+.+|.+| ++.| ++ +|+||||.+ ++ +
T Consensus 149 ----------------~~~~~~f~~~~~~a---------r~~g~l~---~t~HaGE~~~~~~v~~~~~~~~~RIgHg~~~ 200 (305)
T cd00443 149 ----------------ENPLRDFYSYYEYA---------RRLGLLG---LTLHCGETGNREELLQALLLLPDRIGHGIFL 200 (305)
T ss_pred ----------------CCCHHHHHHHHHHH---------HHcCCcc---eEEeecCCCChHHHHHHHHhccceeeceEec
Confidence 26899999999999 8899 88 999999984 11 1
Q ss_pred cCCcch-hhhHhccCceEEEEecCccccccc--cccCCChHHHHHCCCcEEEcCCCccccCCCCCChHHHHHHHHHHcCC
Q psy47 840 SKFPNA-QDIYDHEITIRIAMSPLSNNSLFL--NYHRNPLPEYLARGLVVSLSTDDPLQFHFTKEPLMEEYSIAAQVWKL 916 (1001)
Q Consensus 840 r~~P~L-qyLyy~e~qIpLEvCPlSN~~l~~--~y~~HPf~~~~~~Gl~VsLsTDDPl~F~~T~t~L~eEY~iAa~~~~L 916 (1001)
..+|.+ +++ +++||+||+||+||..++. ++..||++.|+++|++|+||||||++|+ ++|++||..|++.++|
T Consensus 201 ~~~p~~~~~l--~~~~i~ie~CP~SN~~~~~~~~~~~hP~~~~~~~G~~v~i~TDd~~~~~---~~l~~E~~~~~~~~~l 275 (305)
T cd00443 201 LKHPELIYLV--KLRNIPIEVCPTSNVVLGTVQSYEKHPFMRFFKAGLPVSLSTDDPGIFG---TSLSEEYSLAAKTFGL 275 (305)
T ss_pred CCCHHHHHHH--HHcCCEEEECcchhhhhcCCCChhhChHHHHHHCCCeEEEeCCCCcccC---CChHHHHHHHHHHcCc
Confidence 357888 777 8899999999999999987 7999999999999999999999999999 8999999999999999
Q ss_pred CHHHHHHHHHHHHHHcCCChhhhc-cccC
Q psy47 917 SSCDMCELARNSVLMSGFPHGVAG-WDLP 944 (1001)
Q Consensus 917 s~~DL~eLArNSV~~Sf~~~~~K~-~Lg~ 944 (1001)
|.+||++|++|||.+||+++++|+ |++.
T Consensus 276 ~~~~l~~l~~nsi~~sf~~~~~K~~l~~~ 304 (305)
T cd00443 276 TFEDLCELNRNSVLSSFAKDEEKKSLLEV 304 (305)
T ss_pred CHHHHHHHHHHHHHHhcCCHHHHHHHHhc
Confidence 999999999999999999999999 8754
No 15
>PTZ00124 adenosine deaminase; Provisional
Probab=100.00 E-value=1.8e-43 Score=396.03 Aligned_cols=294 Identities=15% Similarity=0.151 Sum_probs=223.7
Q ss_pred cccc-ccccccccccccCCCCHHHHHHHHHHHhccCCCcEEEECCCCcccCHHHHHHhcCCCcccccccccccccCcccc
Q psy47 550 TYFA-RIIKVDTHIHAASCMNQKHLLRFIKKTLKNHTDEVVTKDRTGQTMTLRQVFQSMNLTSYDLTVDMLDVHADRNTF 628 (1001)
Q Consensus 550 rDFy-n~pKVDlHiHlsg~msqk~LlefI~~k~~~~~~~iV~~~~~g~~~TL~evF~~~~l~~~dltvd~Ldv~ad~~~f 628 (1001)
-+|. ++||||||+||+||+++.+|.++.++. +..+ +.|..++.+..... ..+
T Consensus 29 ~~~~~~lPKvELH~HLdGsi~~~tl~~La~~~-~~~~-----------~~~~~~l~~~~~~~---------------~~~ 81 (362)
T PTZ00124 29 YKIWKRIPKCELHCHLDLCFSVDFFLSCIRKY-NLQP-----------NLSDEEILDYYLFA---------------KGG 81 (362)
T ss_pred HHHHhcCCceeEeecccCCCCHHHHHHHHHHc-CCCC-----------CCCHHHHHHHHhcc---------------cCC
Confidence 3676 489999999999999999999996432 1110 12444444332110 112
Q ss_pred cccchhhcccCCcchhHHHHHhhhhccCCCHHHHHHHHHHHHHHHHHcccceEEEEEecc------CCChhH-HHHHHHH
Q psy47 629 HRFDKFNAKYNPIGESRLREVFLKTDNYLGGTYFARIIKEVAADLEESKYQNAELRLSIY------GKSEDE-WDKLATW 701 (1001)
Q Consensus 629 ~rFd~Fn~kY~p~g~~~Lr~iFlktdn~i~geYfa~iikEvi~dle~~k~qYaElR~siy------G~s~~e-w~~la~w 701 (1001)
+.|+.|...|. ....+ +.+.+.|++++++++++++++||.|+|+|++|+ |.+.++ .+.+.+.
T Consensus 82 ~~L~~fl~~f~-----~~~~v------l~t~~dl~r~a~e~~~d~~~dgV~Y~Eir~~P~~~~~~~gl~~~~vv~av~~g 150 (362)
T PTZ00124 82 KSLGEFVEKAI-----RVADI------FNDYEVIEDLAKHAVFNKYKEGVVLMEFRYSPTFVAFKHNLDIDLIHQAIVKG 150 (362)
T ss_pred CCHHHHHHHHH-----HHHHH------hCCHHHHHHHHHHHHHHHHHcCCEEEEEEcCchhhhcCCCCCHHHHHHHHHHH
Confidence 23333333332 12222 234579999999999999999999999999994 234444 4556555
Q ss_pred HHHh-C--ccccceeeEEEeccchhHHHhhHHHHHHHHHHHhhcccccccccCCCCchhhhhhcccceeEEeecCCCCCC
Q psy47 702 AIES-N--VYSNNIRWLIQIPRLYDIFKSNKLINNFQEILQNIFKPLFEVTNDSSSHPHLHKFLQYVIGFDSVDDESKPE 778 (1001)
Q Consensus 702 ~~~~-~--l~s~~vRwlIqIpR~y~~~~a~~~v~~f~e~L~nIF~PLf~at~~p~~~~eL~~fl~~VvGfDLvgdEs~~~ 778 (1001)
+.+. . -+++.++||+++.|..+...+.+.++.... +...||||||+|+|..
T Consensus 151 ~~~a~~~~~~gI~~~lI~~~~R~~~~e~a~e~~~~a~~------------------------~~~~vvGiDLaG~E~~-- 204 (362)
T PTZ00124 151 IKEAVELLDHKIEVGLLCIGDTGHDAAPIKESADFCLK------------------------HKADFVGFDHAGHEVD-- 204 (362)
T ss_pred HHHHHhccCCCceEeEEEEecCCCCHHHHHHHHHHHHh------------------------ccCCeEEEeccCCCCC--
Confidence 5442 2 256789999999999888766654442221 2235999999999952
Q ss_pred CCCCccCCCCCCCCCCCCCCchhHHHHHHHHHhhhchhhhhhcCCCCccccCCCChhh----------hh--c-------
Q psy47 779 NPLFDADVLTPPQWNLEENPCYAYYQYYTYANLTVLNQSTGRRSRRETNLQPGAYKAD----------AL--T------- 839 (1001)
Q Consensus 779 ~~~f~~~~~~P~~w~~~~nPp~~y~~~y~~ANi~~LN~~Rr~~GL~t~~lt~HaGEaG----------~l--L------- 839 (1001)
+ ..|..+|.+| |+.|++ +|+||||+| ++ +
T Consensus 205 ------------------~--~~f~~~f~~A---------r~~Gl~---~t~HaGE~~~~~~~~~v~~ai~~l~~~RIGH 252 (362)
T PTZ00124 205 ------------------L--KPFKDIFDYV---------REAGVN---LTVHAGEDVTLPNLNTLYSAIQVLKVKRIGH 252 (362)
T ss_pred ------------------c--HHHHHHHHHH---------HHCCCC---EEEEeCCCCCCCcchhHHHHHHHhCCCcccc
Confidence 1 2478899999 999999 999999962 11 1
Q ss_pred ----cCCcch-hhhHhccCceEEEEecCccccccc--cccCCChHHHHHCCCcEEEcCCCccccCCCCCChHHHHHHHHH
Q psy47 840 ----SKFPNA-QDIYDHEITIRIAMSPLSNNSLFL--NYHRNPLPEYLARGLVVSLSTDDPLQFHFTKEPLMEEYSIAAQ 912 (1001)
Q Consensus 840 ----r~~P~L-qyLyy~e~qIpLEvCPlSN~~l~~--~y~~HPf~~~~~~Gl~VsLsTDDPl~F~~T~t~L~eEY~iAa~ 912 (1001)
..+|.| +++ ++++|||||||+||+.++. ++..||++.|+++|++|+||||||++|+ ++|++||..+++
T Consensus 253 G~~~~~d~~l~~~l--~~~~I~lEvCPtSN~~~~~v~~~~~HPi~~l~~~Gv~v~InTDDp~~~~---t~l~~Ey~~~~~ 327 (362)
T PTZ00124 253 GIRVAESQELIDMV--KEKDILLEVCPISNVLLNNAKSMDTHPIRKLYDAGVKVSVNSDDPGMFL---TNINDDYEELYT 327 (362)
T ss_pred ccccCCCHHHHHHH--HHcCCeEEECCcchhhhhcCCchhhHHHHHHHHCCCcEEEeCCCccccC---CChhHHHHHHHH
Confidence 247888 888 8999999999999999987 8999999999999999999999999999 999999999999
Q ss_pred HcCCCHHHHHHHHHHHHHHcCCChhhhc-cccC
Q psy47 913 VWKLSSCDMCELARNSVLMSGFPHGVAG-WDLP 944 (1001)
Q Consensus 913 ~~~Ls~~DL~eLArNSV~~Sf~~~~~K~-~Lg~ 944 (1001)
.||||.+||.+|++||+.+||+++++|+ ++..
T Consensus 328 ~~gls~~~l~~l~~nai~asF~~~~~K~~l~~~ 360 (362)
T PTZ00124 328 HLNFTLADFMKMNEWALEKSFLDKDIKLKIKKL 360 (362)
T ss_pred HcCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHh
Confidence 9999999999999999999999999999 7754
No 16
>COG1816 Add Adenosine deaminase [Nucleotide transport and metabolism]
Probab=100.00 E-value=1.4e-42 Score=384.29 Aligned_cols=297 Identities=23% Similarity=0.273 Sum_probs=233.4
Q ss_pred ccccccccccccCCCCHHHHHHHHHHHhccCCCcEEEECCCCcccCHHHHHHhcCCCcc-ccccccc--ccccCcccccc
Q psy47 554 RIIKVDTHIHAASCMNQKHLLRFIKKTLKNHTDEVVTKDRTGQTMTLRQVFQSMNLTSY-DLTVDML--DVHADRNTFHR 630 (1001)
Q Consensus 554 n~pKVDlHiHlsg~msqk~LlefI~~k~~~~~~~iV~~~~~g~~~TL~evF~~~~l~~~-dltvd~L--dv~ad~~~f~r 630 (1001)
..||+|+|.||.|++.+++++++- ++.|+... .-...++ ++.+....+.+
T Consensus 10 ~~pkaelH~HL~g~l~p~~v~~la---------------------------~r~gi~~~~~~~~~~~~~~~~~~~~~~~~ 62 (345)
T COG1816 10 HLPKAELHRHLEGSLRPELVLELA---------------------------RRYGIALPPAEFDETILEELRAEYNKFND 62 (345)
T ss_pred hchhhHhhhcccCCcCHHHHHHHH---------------------------HHhCccCCcccccchhHHHHHHHHhcccc
Confidence 479999999999999999999983 33333211 0000000 01111234666
Q ss_pred cchhhcccCCcchhHHHHHhhhhccCCCHHHHHHHHHHHHHHHHHcccceEEEEEeccC-----CChhH-HHHHHHHHHH
Q psy47 631 FDKFNAKYNPIGESRLREVFLKTDNYLGGTYFARIIKEVAADLEESKYQNAELRLSIYG-----KSEDE-WDKLATWAIE 704 (1001)
Q Consensus 631 Fd~Fn~kY~p~g~~~Lr~iFlktdn~i~geYfa~iikEvi~dle~~k~qYaElR~siyG-----~s~~e-w~~la~w~~~ 704 (1001)
+..|..+|.. ...++. ..+.+.+++.++++++..+|+.|+|+||+||- .+.+. .+.+.+.+..
T Consensus 63 l~~fl~~~y~-----~~~v~~------~~~~~~~la~~~~~~~~~~~~vy~Ei~f~p~~~t~~~l~~~~~~e~~~~~~~~ 131 (345)
T COG1816 63 LQEFLEKYYR-----GASVLR------TEEDFYRLAYEYLEDAAADNVVYAEIRFDPYLHTKRGLSVDTVVEGLIAGFRP 131 (345)
T ss_pred HHHHHHHHHH-----HHHhhc------cHHHHHHHHHHHHHHHHhcCCeEEEEEeCcchhhhccCCHHHHHHHHHHHHHH
Confidence 7777777763 333333 34699999999999999999999999999964 34555 4556665544
Q ss_pred -hCccccceeeEEEeccchhHHHhhHHHHHHHHHHHhhcccccccccCCCCchhhhhhcccceeEEeecCCCCCCCCCCc
Q psy47 705 -SNVYSNNIRWLIQIPRLYDIFKSNKLINNFQEILQNIFKPLFEVTNDSSSHPHLHKFLQYVIGFDSVDDESKPENPLFD 783 (1001)
Q Consensus 705 -~~l~s~~vRwlIqIpR~y~~~~a~~~v~~f~e~L~nIF~PLf~at~~p~~~~eL~~fl~~VvGfDLvgdEs~~~~~~f~ 783 (1001)
.+-++++.+.+++.-|..+.......++-+.. ++-..++|||+.|+|+
T Consensus 132 ~~~~~gi~s~li~~~~r~~~~e~~~~~~~~a~~-----------------------~~~~~~~~~~l~~~e~-------- 180 (345)
T COG1816 132 AERDFGIHSKLIVCLLRHLGFESADEELELALR-----------------------YRDKLVTGVGLAGSES-------- 180 (345)
T ss_pred HhhccCCccceEEEEEeecCHHHHHHHHHHHhh-----------------------cccccCccCCCCcccc--------
Confidence 34556889999999999988776654431111 1223566999999996
Q ss_pred cCCCCCCCCCCCCCCchhHHHHHHHHHhhhchhhhhhcCCCCccccCCCChhh--------------------hhccCCc
Q psy47 784 ADVLTPPQWNLEENPCYAYYQYYTYANLTVLNQSTGRRSRRETNLQPGAYKAD--------------------ALTSKFP 843 (1001)
Q Consensus 784 ~~~~~P~~w~~~~nPp~~y~~~y~~ANi~~LN~~Rr~~GL~t~~lt~HaGEaG--------------------~lLr~~P 843 (1001)
++||+.|...|.+| |+.|++ +|+||||+| +.+..+|
T Consensus 181 ------------~~p~~~f~~~f~~~---------r~~gl~---lt~HaGE~~~~~~i~~al~~~~~~rI~HGi~~~~d~ 236 (345)
T COG1816 181 ------------GYPPELFVSLFKLA---------RDNGLK---LTIHAGEAGGPESIRDALDLLGAERIGHGIRAIEDP 236 (345)
T ss_pred ------------cCCHHHHHHHHHHH---------HHcCce---EEEeccccCCcHHHHHHHHHhchhhhccccccccCH
Confidence 58999999999999 899999 999999985 2235689
Q ss_pred chhhhHhccCceEEEEecCccccccc--cccCCChHHHHHCCCcEEEcCCCccccCCCCCChHHHHHHHHHHcCCCHHHH
Q psy47 844 NAQDIYDHEITIRIAMSPLSNNSLFL--NYHRNPLPEYLARGLVVSLSTDDPLQFHFTKEPLMEEYSIAAQVWKLSSCDM 921 (1001)
Q Consensus 844 ~LqyLyy~e~qIpLEvCPlSN~~l~~--~y~~HPf~~~~~~Gl~VsLsTDDPl~F~~T~t~L~eEY~iAa~~~~Ls~~DL 921 (1001)
.|++++|. +||||||||+||++|++ +|++|||++|+++|++||||||||++|+ +++++||.+||+.++|+..|+
T Consensus 237 ~L~~~l~~-~qI~levCP~SNi~~~~v~~~~~hPf~~~~d~Gv~VsLnTDdp~~f~---~~l~~Ey~~aa~~~~l~~~dl 312 (345)
T COG1816 237 ELLYRLAE-RQIPLEVCPLSNIQLGVVPSLAKHPFKKLFDAGVKVSLNTDDPLYFG---TPLIEEYLVAAQIYGLSREDL 312 (345)
T ss_pred HHHHHHHH-hCCeeEECCcchhhcccccchhhCcHHHHHHcCCceEEcCCChhhcC---CchHHHHHHHHHHhCCCHHHH
Confidence 99666555 99999999999999887 9999999999999999999999999999 899999999999999999999
Q ss_pred HHHHHHHHHHcCCChhhhc-cccCcCc
Q psy47 922 CELARNSVLMSGFPHGVAG-WDLPDVP 947 (1001)
Q Consensus 922 ~eLArNSV~~Sf~~~~~K~-~Lg~~~~ 947 (1001)
|++|||||++||+++++|+ ||+...+
T Consensus 313 ~~~arnav~~af~~~~~K~~ll~~~~~ 339 (345)
T COG1816 313 CELARNAVEAAFISEEEKAALLGKVLK 339 (345)
T ss_pred HHHHHHHHHHccCChHHHHHHHHHHHh
Confidence 9999999999999999999 9987544
No 17
>cd01321 ADGF Adenosine deaminase-related growth factors (ADGF), a novel family of secreted growth-factors with sequence similarty to adenosine deaminase.
Probab=100.00 E-value=3.9e-42 Score=383.27 Aligned_cols=274 Identities=19% Similarity=0.220 Sum_probs=219.0
Q ss_pred cccc-cccc-ccccccccCCCCHHHHHHHHHHHhccCCCcEEEECCCCcccCHHHHHHhcCCCcccccccccccccCccc
Q psy47 550 TYFA-RIIK-VDTHIHAASCMNQKHLLRFIKKTLKNHTDEVVTKDRTGQTMTLRQVFQSMNLTSYDLTVDMLDVHADRNT 627 (1001)
Q Consensus 550 rDFy-n~pK-VDlHiHlsg~msqk~LlefI~~k~~~~~~~iV~~~~~g~~~TL~evF~~~~l~~~dltvd~Ldv~ad~~~ 627 (1001)
.+|. ++|| ||||+||.|||++.+|.++..+ ++++.+
T Consensus 18 ~~~~~~lPK~~eLH~Hl~Gsi~~~tl~~la~~----------------------~fl~~f-------------------- 55 (345)
T cd01321 18 FKIIQKMPKGALLHVHDTAMVSSDWLIKNATY----------------------RFEQIF-------------------- 55 (345)
T ss_pred HHHHHhCCChHhhccCccccCCHHHHHHHHHH----------------------HHHHHH--------------------
Confidence 4675 5899 7999999999999999998533 111111
Q ss_pred ccccchhhcccCCcchhHHHHHhhhhccCCCHHHHHHHHHHHHHHHHHcccceEEEEEecc--------CCChhH-HHHH
Q psy47 628 FHRFDKFNAKYNPIGESRLREVFLKTDNYLGGTYFARIIKEVAADLEESKYQNAELRLSIY--------GKSEDE-WDKL 698 (1001)
Q Consensus 628 f~rFd~Fn~kY~p~g~~~Lr~iFlktdn~i~geYfa~iikEvi~dle~~k~qYaElR~siy--------G~s~~e-w~~l 698 (1001)
. ....+.. +.+.|++++++++++++++||+|+|+|++|. |.+.++ .+.+
T Consensus 56 -----------~-----~~~~~l~------~~~~~~~~~~~~~~d~~~dgV~Y~Eir~~P~~~~~~~~~g~~~~~v~~av 113 (345)
T cd01321 56 -----------D-----IIDGLLT------YLPIFRDYYRRLLEELYEDNVQYVELRSSFSPLYDLDGREYDYEETVQLL 113 (345)
T ss_pred -----------H-----HHHHHhc------CHHHHHHHHHHHHHHHHHcCCEEEEEeecchHHHHccCCCCCHHHHHHHH
Confidence 1 1222222 2468999999999999999999999999983 245655 4555
Q ss_pred HHHHHH----hCccccceeeEEEeccchhHHHhhHHHHHHHHHHHhhcccccccccCCCCchhhhhhcccceeEEeecCC
Q psy47 699 ATWAIE----SNVYSNNIRWLIQIPRLYDIFKSNKLINNFQEILQNIFKPLFEVTNDSSSHPHLHKFLQYVIGFDSVDDE 774 (1001)
Q Consensus 699 a~w~~~----~~l~s~~vRwlIqIpR~y~~~~a~~~v~~f~e~L~nIF~PLf~at~~p~~~~eL~~fl~~VvGfDLvgdE 774 (1001)
.+.+.. +.- .+.+|||+++.|.++...+.+.++....+-. .+...||||||+|+|
T Consensus 114 ~~~~~~~~~~~~~-~i~v~lI~~~~R~~~~e~~~e~~~~a~~~~~--------------------~~~~~VvGidL~G~E 172 (345)
T cd01321 114 EEVVEKFKKTHPD-FIGLKIIYATLRNFNDSEIKESMEQCLNLKK--------------------KFPDFIAGFDLVGQE 172 (345)
T ss_pred HHHHHHHHHhCCC-CceEEEEEEecCCCCHHHHHHHHHHHHHHHH--------------------hCCCeEEEEecCCCc
Confidence 533322 211 4689999999999988777766554333100 123359999999999
Q ss_pred CCCCCCCCccCCCCCCCCCCCCCCchhHHHHHHHHHhhhchhhhhhcC--CCCccccCCCChhh------------hh-c
Q psy47 775 SKPENPLFDADVLTPPQWNLEENPCYAYYQYYTYANLTVLNQSTGRRS--RRETNLQPGAYKAD------------AL-T 839 (1001)
Q Consensus 775 s~~~~~~f~~~~~~P~~w~~~~nPp~~y~~~y~~ANi~~LN~~Rr~~G--L~t~~lt~HaGEaG------------~l-L 839 (1001)
.. ++||..|..+|.+| |+.| ++ +|+||||.+ ++ +
T Consensus 173 ~~-------------------~~~~~~f~~~f~~a---------r~~g~~l~---~t~HAGE~~~~~~~~~~~v~~al~l 221 (345)
T cd01321 173 DA-------------------GRPLLDFLPQLLWF---------PKQCAEIP---FFFHAGETNGDGTETDENLVDALLL 221 (345)
T ss_pred cC-------------------CCCHHHHHHHHHHH---------HHhCCCCc---eEeecCCCcCCCCCChhHHHHHHHh
Confidence 42 47889999999999 8889 99 999999984 12 1
Q ss_pred -----------cCCcch-hhhHhccCceEEEEecCccccccc--cccCCChHHHHHCCCcEEEcCCCccccCCCCC-ChH
Q psy47 840 -----------SKFPNA-QDIYDHEITIRIAMSPLSNNSLFL--NYHRNPLPEYLARGLVVSLSTDDPLQFHFTKE-PLM 904 (1001)
Q Consensus 840 -----------r~~P~L-qyLyy~e~qIpLEvCPlSN~~l~~--~y~~HPf~~~~~~Gl~VsLsTDDPl~F~~T~t-~L~ 904 (1001)
..+|.| ++| ++++|+|||||+||+.|+. ++..||++.|+++|++||||||||++|+ + +|+
T Consensus 222 g~~RIGHG~~~~~dp~ll~~l--~~~~I~lEvCPtSN~~~~~v~~~~~HPl~~ll~~Gv~vtinTDDp~~f~---t~~l~ 296 (345)
T cd01321 222 NTKRIGHGFALPKHPLLMDLV--KKKNIAIEVCPISNQVLGLVSDLRNHPAAALLARGVPVVISSDDPGFWG---AKGLS 296 (345)
T ss_pred CCCcCccccccCcCHHHHHHH--HHcCCeEEECcchhhhhccccchhhChHHHHHHCCCeEEEeCCCcchhC---CCCch
Confidence 247888 888 8999999999999999987 8999999999999999999999999999 8 999
Q ss_pred HHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCChhhhc-cccC
Q psy47 905 EEYSIAAQVWK---LSSCDMCELARNSVLMSGFPHGVAG-WDLP 944 (1001)
Q Consensus 905 eEY~iAa~~~~---Ls~~DL~eLArNSV~~Sf~~~~~K~-~Lg~ 944 (1001)
+||..|++.|| ||.+||++|++|||.+||+++++|+ ++..
T Consensus 297 ~Ey~~~~~~~g~~~l~~~~l~~l~~nsi~~sF~~~~~K~~l~~~ 340 (345)
T cd01321 297 HDFYQAFMGLAPADAGLRGLKQLAENSIRYSALSDQEKDEAVAK 340 (345)
T ss_pred HHHHHHHHHhccCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHH
Confidence 99999999999 9999999999999999999999999 7654
No 18
>KOG1097|consensus
Probab=100.00 E-value=8.5e-40 Score=363.49 Aligned_cols=295 Identities=19% Similarity=0.244 Sum_probs=226.2
Q ss_pred ccccccccccCCCCHHHHHHHHHHHhccCCCcEEEECCCCcccCHHHHHHhcCCCcccccccccccccCcccccccchhh
Q psy47 556 IKVDTHIHAASCMNQKHLLRFIKKTLKNHTDEVVTKDRTGQTMTLRQVFQSMNLTSYDLTVDMLDVHADRNTFHRFDKFN 635 (1001)
Q Consensus 556 pKVDlHiHlsg~msqk~LlefI~~k~~~~~~~iV~~~~~g~~~TL~evF~~~~l~~~dltvd~Ldv~ad~~~f~rFd~Fn 635 (1001)
|||++|+||+||++.+.|+++=. ++|+..+. ..++..+++..
T Consensus 48 pk~eLHaHl~Gsls~~~l~~L~~---------------------------r~~~~~p~-----------~~~~~~~~~~l 89 (399)
T KOG1097|consen 48 PKVELHAHLTGSLSPDLLLDLTY---------------------------RFGIPLPK-----------ARTAEELEKVL 89 (399)
T ss_pred CCeEEEeeccccccHHHHHHHHH---------------------------hcCCCCcc-----------cccHHHHHHHH
Confidence 99999999999999999988822 22222110 00111222233
Q ss_pred cccCCcc-hhHHHH-Hhhhhcc-CCCHHHHHHHHHHHHHHHHHcccceEEEEE-ec-----cC-CChhHH-HHHHHHHHH
Q psy47 636 AKYNPIG-ESRLRE-VFLKTDN-YLGGTYFARIIKEVAADLEESKYQNAELRL-SI-----YG-KSEDEW-DKLATWAIE 704 (1001)
Q Consensus 636 ~kY~p~g-~~~Lr~-iFlktdn-~i~geYfa~iikEvi~dle~~k~qYaElR~-si-----yG-~s~~ew-~~la~w~~~ 704 (1001)
.+|.|.. .....+ +|--.++ .+..+.|++++++++++++++||+|+|+|. .+ -| .+.++. ..+.+...+
T Consensus 90 ~~~~~~~~l~~f~~~~f~~l~~ll~~~~~~~~~~y~~~eef~~dgVvY~E~Rt~~p~l~~~~G~~t~e~~v~~~~~~~e~ 169 (399)
T KOG1097|consen 90 ERYKPLYPLADFLDNIFYLLHGLLIYAPAFRDYAYEALEEFAEDGVVYLEVRTYPPQLYTADGDITPEDVVAIVIAALEK 169 (399)
T ss_pred HhhcccccHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHcCceEEEEEccCchhhhcCCCCCHHHHHHHHHHHHHH
Confidence 3333332 222222 4443333 445789999999999999999999999994 33 25 455552 333333332
Q ss_pred -hCccccceeeEEEeccchhHHHhhHHHHHHHHHHHhhcccccccccCCCCchhhh-hhcccceeEEeecCCCCCCCCCC
Q psy47 705 -SNVYSNNIRWLIQIPRLYDIFKSNKLINNFQEILQNIFKPLFEVTNDSSSHPHLH-KFLQYVIGFDSVDDESKPENPLF 782 (1001)
Q Consensus 705 -~~l~s~~vRwlIqIpR~y~~~~a~~~v~~f~e~L~nIF~PLf~at~~p~~~~eL~-~fl~~VvGfDLvgdEs~~~~~~f 782 (1001)
..-+.+.+|.|+|+.|..+.+.+.+++..+.+ ++ .+...||||||+|+|..
T Consensus 170 ~~~~fpI~sklI~~~~R~~~~e~~~e~v~~~~~---------------------~~~~~~~~VvGidL~G~e~~------ 222 (399)
T KOG1097|consen 170 AKRDFPIKSKLIMCCIRHMPPEVAEETVSEAKE---------------------LNKLFPNFVVGIDLVGQEDL------ 222 (399)
T ss_pred HHHhCCCcceEEEeeccCCChHHHHHHHHHHHH---------------------HHHhCCCeEEEEecCCCCCC------
Confidence 23334889999999999999988877664333 22 24567999999999963
Q ss_pred ccCCCCCCCCCCCCCCchhHHHHHHHHHhhhchhhhhhcCCCCccccCCCChh-h-------hh-------------ccC
Q psy47 783 DADVLTPPQWNLEENPCYAYYQYYTYANLTVLNQSTGRRSRRETNLQPGAYKA-D-------AL-------------TSK 841 (1001)
Q Consensus 783 ~~~~~~P~~w~~~~nPp~~y~~~y~~ANi~~LN~~Rr~~GL~t~~lt~HaGEa-G-------~l-------------Lr~ 841 (1001)
++|++.|...+.+| ++.|++ +|+||||. | ++ +.+
T Consensus 223 -------------~~p~~~f~~vl~~~---------~~~gi~---~t~HaGE~~~~~~~v~~~LD~l~~~RIGHG~~l~~ 277 (399)
T KOG1097|consen 223 -------------GGPLSLFLEVLAKA---------PAKGIH---LTFHAGETNGGASVVKNALDLLGTERIGHGYFLTK 277 (399)
T ss_pred -------------CCChhhhHHHHHhh---------hhcCCc---EEEEccccCCChHHHHHHHHhhCCccccCceeccC
Confidence 68999999999999 779999 99999999 3 11 135
Q ss_pred Ccch-hhhHhccCceEEEEecCccccccc--cccCCChHHHHHCCCcEEEcCCCccccCCCCCChHHHHHHHHHHcC--C
Q psy47 842 FPNA-QDIYDHEITIRIAMSPLSNNSLFL--NYHRNPLPEYLARGLVVSLSTDDPLQFHFTKEPLMEEYSIAAQVWK--L 916 (1001)
Q Consensus 842 ~P~L-qyLyy~e~qIpLEvCPlSN~~l~~--~y~~HPf~~~~~~Gl~VsLsTDDPl~F~~T~t~L~eEY~iAa~~~~--L 916 (1001)
+|.| .++ +.++|+|||||+||+.+++ ++++||+.+|+++|+||+||||||++|+ ..||+.||+.|+...+ +
T Consensus 278 dp~L~~~~--k~~nI~lEiCP~SN~vl~~v~d~rnhp~~~~~~~~vP~vI~sDDP~~f~--~~~Lt~dfy~A~~~~~~~~ 353 (399)
T KOG1097|consen 278 DPELINLL--KSRNIALEICPISNQVLGLVSDLRNHPVARLLAAGVPVVINSDDPGFFG--AAPLTLDFYLAFLGIAPNL 353 (399)
T ss_pred CHHHHHHH--HhcCceEEEccchhhheeccccccccHHHHHHhCCCCEEEeCCCccccc--CccccHHHHHHHHhccccC
Confidence 8988 888 8899999999999999998 8999999999999999999999999999 4579999999999888 9
Q ss_pred CHHHHHHHHHHHHHHcCCChhhhc-cccC
Q psy47 917 SSCDMCELARNSVLMSGFPHGVAG-WDLP 944 (1001)
Q Consensus 917 s~~DL~eLArNSV~~Sf~~~~~K~-~Lg~ 944 (1001)
+...+++||+|||.+||+++++|. .+..
T Consensus 354 ~~~~l~~la~nai~~S~l~eeek~~~l~~ 382 (399)
T KOG1097|consen 354 DLRELKRLALNAIKYSFLSEEEKNELLER 382 (399)
T ss_pred CHHHHHHHHHHHhhhccCCHHHHHHHHHH
Confidence 999999999999999999999999 7655
No 19
>TIGR01431 adm_rel adenosine deaminase-related growth factor. Members of this family have been described as secreted proteins with growth factor activity and regions of adenosine deaminase homology in insects, mollusks, and vertebrates.
Probab=100.00 E-value=9.9e-36 Score=343.86 Aligned_cols=244 Identities=21% Similarity=0.235 Sum_probs=195.6
Q ss_pred HHHHHhhhhccCCC-HHHHHHHHHHHHHHHHHcccceEEEEEec---c---CC--ChhH-HHHHHHHHHH----hCcccc
Q psy47 645 RLREVFLKTDNYLG-GTYFARIIKEVAADLEESKYQNAELRLSI---Y---GK--SEDE-WDKLATWAIE----SNVYSN 710 (1001)
Q Consensus 645 ~Lr~iFlktdn~i~-geYfa~iikEvi~dle~~k~qYaElR~si---y---G~--s~~e-w~~la~w~~~----~~l~s~ 710 (1001)
.+.++|....+++. .+.|++++++++++++++||+|+|+|+++ | |. +.++ ++.+.+.+.+ +.- .+
T Consensus 177 ~F~~~f~~~~~ll~y~p~~~~~~~~~l~d~~~DgV~Y~ElR~~p~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~-fi 255 (479)
T TIGR01431 177 RFGSIFALLDGLLFYAPSWRDYYYRALEEFYADNVQYLELRSTLFILYELEGTSHDEEDSVRIYKEVTEKFMAEHPD-FI 255 (479)
T ss_pred HHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHcCCEEEEEEecCchHhhcCCCCCCHHHHHHHHHHHHHHHHHhCCC-Ce
Confidence 45566666665554 78999999999999999999999999996 2 43 3333 3444433332 211 25
Q ss_pred ceeeEEEeccchhHHHhhHHHHHHHHHHHhhcccccccccCCCCchhhh-hhcccceeEEeecCCCCCCCCCCccCCCCC
Q psy47 711 NIRWLIQIPRLYDIFKSNKLINNFQEILQNIFKPLFEVTNDSSSHPHLH-KFLQYVIGFDSVDDESKPENPLFDADVLTP 789 (1001)
Q Consensus 711 ~vRwlIqIpR~y~~~~a~~~v~~f~e~L~nIF~PLf~at~~p~~~~eL~-~fl~~VvGfDLvgdEs~~~~~~f~~~~~~P 789 (1001)
.+++|.++.|..++..+.+.++...+ ++ .|+..||||||+|+|..
T Consensus 256 ~~rlI~~~~R~~~~~~~~~~~~~a~~---------------------~k~~~p~~vvGfDL~G~E~~------------- 301 (479)
T TIGR01431 256 GSKLIYSPLRNKDKEELDNYIKVAME---------------------LKEKYPDFVAGFDLVGQEDK------------- 301 (479)
T ss_pred EEEEEEEccCCCCHHHHHHHHHHHHH---------------------HHhhCCCeEEEEeccCCCCC-------------
Confidence 78999999999988777665553332 11 24557999999999953
Q ss_pred CCCCCCCCCchhHHHHHHHHHhhhchhhhhhcCCCCccccCCCChhh------------h-hc-----------cCCcch
Q psy47 790 PQWNLEENPCYAYYQYYTYANLTVLNQSTGRRSRRETNLQPGAYKAD------------A-LT-----------SKFPNA 845 (1001)
Q Consensus 790 ~~w~~~~nPp~~y~~~y~~ANi~~LN~~Rr~~GL~t~~lt~HaGEaG------------~-lL-----------r~~P~L 845 (1001)
++|+..|...|.++ ++..|++ +|+||||++ + +| .+||.|
T Consensus 302 ------g~pl~~f~~~~~~~--------~~~~gl~---~t~HAGE~~~~g~~~d~nl~dAIlLg~~RIGHG~~l~~~P~l 364 (479)
T TIGR01431 302 ------GRSLLDFIDALLGP--------SDKEKLP---YFFHAGETNWQGTTVDENLIDALLLNTTRIGHGFALVKHPLV 364 (479)
T ss_pred ------CCCHHHHHHHHHHH--------HHhCCCC---EEEecCCcCCCCCCchhHHHHHHHcCCccccCcccccCCHHH
Confidence 56888999988865 2458888 999999983 1 22 358988
Q ss_pred -hhhHhccCceEEEEecCccccccc--cccCCChHHHHHCCCcEEEcCCCccccCCCCCChHHHHHHHHHHcC---CCHH
Q psy47 846 -QDIYDHEITIRIAMSPLSNNSLFL--NYHRNPLPEYLARGLVVSLSTDDPLQFHFTKEPLMEEYSIAAQVWK---LSSC 919 (1001)
Q Consensus 846 -qyLyy~e~qIpLEvCPlSN~~l~~--~y~~HPf~~~~~~Gl~VsLsTDDPl~F~~T~t~L~eEY~iAa~~~~---Ls~~ 919 (1001)
+++ ++++|+|||||+||..|++ ++..||++.|+++|+||+||||||++|+ .++|++||..|++.|+ ++..
T Consensus 365 ~~~v--ke~~I~lEvCP~SN~~l~~v~~~~~HPl~~lla~Gvpv~InSDDP~~~~--~t~Ls~ef~~a~~~~~~~~~~l~ 440 (479)
T TIGR01431 365 LQML--KERNIAVEVNPISNQVLQLVADLRNHPCAYLFADNYPMVISSDDPAFWG--ATPLSHDFYIAFMGLASAKADLR 440 (479)
T ss_pred HHHH--HHhCCeEEECccchhhhcccCCcccChHHHHHHCCCcEEEeCCCccccC--CCCchHHHHHHHHHhcccCCCHH
Confidence 888 9999999999999999998 8999999999999999999999999999 2489999999999998 7999
Q ss_pred HHHHHHHHHHHHcCCChhhhc-cccC
Q psy47 920 DMCELARNSVLMSGFPHGVAG-WDLP 944 (1001)
Q Consensus 920 DL~eLArNSV~~Sf~~~~~K~-~Lg~ 944 (1001)
+|++||+|||++||+++++|+ ++..
T Consensus 441 ~L~~la~NSi~~Sfl~~~eK~~~~~~ 466 (479)
T TIGR01431 441 TLKQLALNSIKYSALSEEEKRTALAK 466 (479)
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHH
Confidence 999999999999999999998 6654
No 20
>PRK09358 adenosine deaminase; Provisional
Probab=100.00 E-value=2e-34 Score=318.91 Aligned_cols=296 Identities=20% Similarity=0.251 Sum_probs=212.6
Q ss_pred ccc-ccccccccccccCCCCHHHHHHHHHHHhccC-CCcEEEECCCCcccCHHHHHHhcCCCcccccccccccccCcccc
Q psy47 551 YFA-RIIKVDTHIHAASCMNQKHLLRFIKKTLKNH-TDEVVTKDRTGQTMTLRQVFQSMNLTSYDLTVDMLDVHADRNTF 628 (1001)
Q Consensus 551 DFy-n~pKVDlHiHlsg~msqk~LlefI~~k~~~~-~~~iV~~~~~g~~~TL~evF~~~~l~~~dltvd~Ldv~ad~~~f 628 (1001)
+|+ ++||||||+||+||+++.+|.++.++. +.. |. .|..++-+..+.. .+
T Consensus 5 ~~~~~lpK~eLH~Hl~Gs~~~~~l~~l~~~~-~~~~p~-----------~~~~~~~~~r~~~----------------~~ 56 (340)
T PRK09358 5 MIIRSLPKAELHLHLDGSLRPETILELARRN-GIALPA-----------TDVEELPWVRAAY----------------DF 56 (340)
T ss_pred HHHhcCCceeEEecccCCCCHHHHHHHHHHc-CCCCCC-----------CCHHHHhhhcccc----------------cC
Confidence 565 589999999999999999999985432 111 10 0122211100000 01
Q ss_pred cccchhhcccCCcchhHHHHHhhhhccCCCHHHHHHHHHHHHHHHHHcccceEEEEEecc-----CCChhH-HHHHHHHH
Q psy47 629 HRFDKFNAKYNPIGESRLREVFLKTDNYLGGTYFARIIKEVAADLEESKYQNAELRLSIY-----GKSEDE-WDKLATWA 702 (1001)
Q Consensus 629 ~rFd~Fn~kY~p~g~~~Lr~iFlktdn~i~geYfa~iikEvi~dle~~k~qYaElR~siy-----G~s~~e-w~~la~w~ 702 (1001)
..|..|..+|. .-..-..+.+.+.+++++++.++.++|+.|+|+|++++ |.+.++ .+.+.+.+
T Consensus 57 ~~l~~~l~~~~-----------~~~~~~~t~ed~~~~~~~~~~e~~~~Gvty~E~~~~p~~~~~~gl~~~~~~~a~~~~~ 125 (340)
T PRK09358 57 RDLQSFLDKYD-----------AGVAVLQTEEDLRRLAFEYLEDAAADGVVYAEIRFDPQLHTERGLPLEEVVEAVLDGL 125 (340)
T ss_pred CCHHHHHHHHH-----------HHHHHhCCHHHHHHHHHHHHHHHHHcCCEEEEEEeChhhhhhcCCCHHHHHHHHHHHH
Confidence 11222222211 11122345679999999999999999999999999986 334444 33333333
Q ss_pred HH-hCccccceeeEEEeccchhHHHhhHHHHHHHHHHHhhcccccccccCCCCchhhhhhcccceeEEeecCCCCCCCCC
Q psy47 703 IE-SNVYSNNIRWLIQIPRLYDIFKSNKLINNFQEILQNIFKPLFEVTNDSSSHPHLHKFLQYVIGFDSVDDESKPENPL 781 (1001)
Q Consensus 703 ~~-~~l~s~~vRwlIqIpR~y~~~~a~~~v~~f~e~L~nIF~PLf~at~~p~~~~eL~~fl~~VvGfDLvgdEs~~~~~~ 781 (1001)
.+ ..-.++.++++.++.|..+...+...+. ++++. ++...|||||++|+|..
T Consensus 126 ~~a~~~~gi~~~li~~~~r~~~~~~~~~~~~---~~~~~-------------------~~~~~vvg~~l~g~e~~----- 178 (340)
T PRK09358 126 RAAEAEFGISVRLILCFMRHFGEEAAARELE---ALAAR-------------------YRDDGVVGFDLAGDELG----- 178 (340)
T ss_pred HHHHHhcCceEEEEEEecCCCCHHHHHHHHH---HHHHH-------------------hcCCcEEEEeCCCcCCC-----
Confidence 22 1223568899999999765433322221 21110 12235999999998852
Q ss_pred CccCCCCCCCCCCCCCCchhHHHHHHHHHhhhchhhhhhcCCCCccccCCCChhh-------hh--c-----------cC
Q psy47 782 FDADVLTPPQWNLEENPCYAYYQYYTYANLTVLNQSTGRRSRRETNLQPGAYKAD-------AL--T-----------SK 841 (1001)
Q Consensus 782 f~~~~~~P~~w~~~~nPp~~y~~~y~~ANi~~LN~~Rr~~GL~t~~lt~HaGEaG-------~l--L-----------r~ 841 (1001)
.|+..+...|..| ++.|++ +++||||.+ ++ + ..
T Consensus 179 ---------------~~~~~~~~~~~~A---------~~~g~~---~~~H~~E~~~~~~~~~al~~lg~~ri~Hg~~l~~ 231 (340)
T PRK09358 179 ---------------FPPSKFARAFDRA---------RDAGLR---LTAHAGEAGGPESIWEALDELGAERIGHGVRAIE 231 (340)
T ss_pred ---------------CCHHHHHHHHHHH---------HHCCCC---eEEcCCCCCchhHHHHHHHHcCCcccchhhhhcc
Confidence 4567889999999 999999 999999973 11 1 12
Q ss_pred Ccch-hhhHhccCceEEEEecCccccccc--cccCCChHHHHHCCCcEEEcCCCccccCCCCCChHHHHHHHHHHcCCCH
Q psy47 842 FPNA-QDIYDHEITIRIAMSPLSNNSLFL--NYHRNPLPEYLARGLVVSLSTDDPLQFHFTKEPLMEEYSIAAQVWKLSS 918 (1001)
Q Consensus 842 ~P~L-qyLyy~e~qIpLEvCPlSN~~l~~--~y~~HPf~~~~~~Gl~VsLsTDDPl~F~~T~t~L~eEY~iAa~~~~Ls~ 918 (1001)
+|.+ +.+ +++||+|++||+||..++. ++..||+++|+++|++|+||||||++++ ++|.+||..+++.|||+.
T Consensus 232 ~~~~~~~l--~~~gi~v~~cP~Sn~~l~~~~~~~~~pi~~l~~~Gv~v~lgTD~~~~~~---~~l~~e~~~~~~~~~l~~ 306 (340)
T PRK09358 232 DPALMARL--ADRRIPLEVCPTSNVQTGAVPSLAEHPLKTLLDAGVRVTINTDDPLVFG---TTLTEEYEALAEAFGLSD 306 (340)
T ss_pred CHHHHHHH--HHcCCeEEECCCccccccccCCcccChHHHHHHCCCEEEECCCCCcccC---CCHHHHHHHHHHHhCCCH
Confidence 5655 888 8999999999999999886 6788999999999999999999999998 899999999999999999
Q ss_pred HHHHHHHHHHHHHcCCChhhhc-cccC
Q psy47 919 CDMCELARNSVLMSGFPHGVAG-WDLP 944 (1001)
Q Consensus 919 ~DL~eLArNSV~~Sf~~~~~K~-~Lg~ 944 (1001)
.++.+|++|||.+||+++++|+ |+..
T Consensus 307 ~el~~l~~nai~~sf~~~~~k~~l~~~ 333 (340)
T PRK09358 307 EDLAQLARNALEAAFLSEEEKAALLAE 333 (340)
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHH
Confidence 9999999999999999999999 8754
No 21
>TIGR01430 aden_deam adenosine deaminase. This family includes the experimentally verified adenosine deaminases of mammals and E. coli. Other members of this family are predicted also to be adenosine deaminase, an enzyme of nucleotide degradation. This family is distantly related to AMP deaminase.
Probab=100.00 E-value=3.2e-32 Score=299.51 Aligned_cols=288 Identities=20% Similarity=0.240 Sum_probs=208.4
Q ss_pred cccccccccccCCCCHHHHHHHHHHHhccC-CCcEEEECCCCcccCHHHHHHhcCCCcccccccccccccCcccccccch
Q psy47 555 IIKVDTHIHAASCMNQKHLLRFIKKTLKNH-TDEVVTKDRTGQTMTLRQVFQSMNLTSYDLTVDMLDVHADRNTFHRFDK 633 (1001)
Q Consensus 555 ~pKVDlHiHlsg~msqk~LlefI~~k~~~~-~~~iV~~~~~g~~~TL~evF~~~~l~~~dltvd~Ldv~ad~~~f~rFd~ 633 (1001)
+||||||+||+||++..+|.++.++. +.+ |. ...++.++++... .+..|..
T Consensus 1 lpK~eLH~Hl~Gsi~~~~l~~l~~~~-~~~~~~---------~~~~~~~~~~~~~------------------~~~~l~~ 52 (324)
T TIGR01430 1 LPKAELHLHLEGSIRPETLLELAQKN-GIPLPA---------DLQSGEELKEAYD------------------KFRDLQD 52 (324)
T ss_pred CCceeeEecccCCCCHHHHHHHHHHc-CCCCCC---------CcccHHHHHhhhc------------------cCCCHHH
Confidence 59999999999999999999985432 211 10 1123444432211 0112222
Q ss_pred hhcccCCcchhHHHHHhhhh-ccCCCHHHHHHHHHHHHHHHHHcccceEEEEEecc-----CCChhH-HHHHHHHHHH-h
Q psy47 634 FNAKYNPIGESRLREVFLKT-DNYLGGTYFARIIKEVAADLEESKYQNAELRLSIY-----GKSEDE-WDKLATWAIE-S 705 (1001)
Q Consensus 634 Fn~kY~p~g~~~Lr~iFlkt-dn~i~geYfa~iikEvi~dle~~k~qYaElR~siy-----G~s~~e-w~~la~w~~~-~ 705 (1001)
|. +.|.-. .-..+.+.+.+.+++++.++.++|+.|+|+|++++ |.+.++ .+.+.+.+.+ .
T Consensus 53 ~l------------~~~~~~~~~~~t~e~l~~~~~~~~~e~~~~Gv~y~E~r~~p~~~~~~g~~~~~~~~~~~~~i~~a~ 120 (324)
T TIGR01430 53 FL------------AKYDFGVEVLRTEDDFKRLAYEYVEKAAKDGVVYAEVFFDPQLHTNRGISPDTVVEAVLDGLDEAE 120 (324)
T ss_pred HH------------HHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCCEEEEEEeCccccccCCCCHHHHHHHHHHHHHHHH
Confidence 21 111111 12345678999999999999999999999999875 344444 3323333322 1
Q ss_pred CccccceeeEEEeccchhHHHhhHHHHHHHHHHHhhcccccccccCCCCchhhhhhc-ccceeEEeecCCCCCCCCCCcc
Q psy47 706 NVYSNNIRWLIQIPRLYDIFKSNKLINNFQEILQNIFKPLFEVTNDSSSHPHLHKFL-QYVIGFDSVDDESKPENPLFDA 784 (1001)
Q Consensus 706 ~l~s~~vRwlIqIpR~y~~~~a~~~v~~f~e~L~nIF~PLf~at~~p~~~~eL~~fl-~~VvGfDLvgdEs~~~~~~f~~ 784 (1001)
.-++..+++++++.|..+.......++... .+- ..|||||+.|+|.
T Consensus 121 ~~~gi~~~li~~~~r~~~~~~~~~~~~~~~------------------------~~~~~~vvg~~l~~~e~--------- 167 (324)
T TIGR01430 121 RDFGIKSRLILCGMRHKQPEAAEETLELAK------------------------PYKEQTIVGFGLAGDER--------- 167 (324)
T ss_pred HhcCCeEEEEEEEeCCCCHHHHHHHHHHHH------------------------hhccCcEEEecCCCCCC---------
Confidence 223467899999999765433332222100 011 2489999999874
Q ss_pred CCCCCCCCCCCCCCchhHHHHHHHHHhhhchhhhhhcCCCCccccCCCChhh-------hh-------------ccCCcc
Q psy47 785 DVLTPPQWNLEENPCYAYYQYYTYANLTVLNQSTGRRSRRETNLQPGAYKAD-------AL-------------TSKFPN 844 (1001)
Q Consensus 785 ~~~~P~~w~~~~nPp~~y~~~y~~ANi~~LN~~Rr~~GL~t~~lt~HaGEaG-------~l-------------Lr~~P~ 844 (1001)
..|+..|...+..| ++.|++ +++||||.+ ++ +..+|.
T Consensus 168 -----------~~~~~~~~~~~~~A---------~~~g~~---i~~Ha~E~~~~~~~~~~~~~~g~~ri~Hg~~l~~~~~ 224 (324)
T TIGR01430 168 -----------GGPPPDFVRAFAIA---------RELGLH---LTVHAGELGGPESVREALDDLGATRIGHGVRALEDPE 224 (324)
T ss_pred -----------CCCHHHHHHHHHHH---------HHCCCC---eEEecCCCCChHHHHHHHHHcCchhcchhhhhccCHH
Confidence 24567788999999 899999 999999972 11 122554
Q ss_pred h-hhhHhccCceEEEEecCccccccc--cccCCChHHHHHCCCcEEEcCCCccccCCCCCChHHHHHHHHHHcCCCHHHH
Q psy47 845 A-QDIYDHEITIRIAMSPLSNNSLFL--NYHRNPLPEYLARGLVVSLSTDDPLQFHFTKEPLMEEYSIAAQVWKLSSCDM 921 (1001)
Q Consensus 845 L-qyLyy~e~qIpLEvCPlSN~~l~~--~y~~HPf~~~~~~Gl~VsLsTDDPl~F~~T~t~L~eEY~iAa~~~~Ls~~DL 921 (1001)
+ +.+ +++||++++||+||..++. ++..||++.|+++|++|+||||||++|+ ++|++||..|.+.+|+|..||
T Consensus 225 ~i~~l--~~~gi~v~~cP~Sn~~l~~~~~~~~~pi~~l~~~Gv~v~igTD~~~~~~---~~l~~e~~~a~~~~~l~~~el 299 (324)
T TIGR01430 225 LLKRL--AQENITLEVCPTSNVALGVVKSLAEHPLRRFLEAGVKVTLNSDDPAYFG---SYLTEEYEIAAKHAGLTEEEL 299 (324)
T ss_pred HHHHH--HHcCceEEECCcccccccccCCcccChHHHHHHCCCEEEECCCCCcccC---CCHHHHHHHHHHHcCCCHHHH
Confidence 5 778 8899999999999999884 6789999999999999999999999998 799999999999999999999
Q ss_pred HHHHHHHHHHcCCChhhhc-ccc
Q psy47 922 CELARNSVLMSGFPHGVAG-WDL 943 (1001)
Q Consensus 922 ~eLArNSV~~Sf~~~~~K~-~Lg 943 (1001)
..+++||+.+||.++++|+ ++.
T Consensus 300 ~~~~~na~~~~f~~~~~k~~l~~ 322 (324)
T TIGR01430 300 KQLARNALEGSFLSDDEKKELLA 322 (324)
T ss_pred HHHHHHHHHHhCCCHHHHHHHHh
Confidence 9999999999999999999 764
No 22
>cd01320 ADA Adenosine deaminase (ADA) is a monomeric zinc dependent enzyme which catalyzes the irreversible hydrolytic deamination of both adenosine, as well as desoxyadenosine, to ammonia and inosine or desoxyinosine, respectively. ADA plays an important role in the purine pathway. Low, as well as high levels of ADA activity have been linked to several diseases.
Probab=99.97 E-value=2.7e-30 Score=283.66 Aligned_cols=292 Identities=23% Similarity=0.241 Sum_probs=205.6
Q ss_pred ccccccccccccCCCCHHHHHHHHHHHhccCCCcEEEECCCCcccCHHHHHHhcCCCcccccccccccccCcccccccch
Q psy47 554 RIIKVDTHIHAASCMNQKHLLRFIKKTLKNHTDEVVTKDRTGQTMTLRQVFQSMNLTSYDLTVDMLDVHADRNTFHRFDK 633 (1001)
Q Consensus 554 n~pKVDlHiHlsg~msqk~LlefI~~k~~~~~~~iV~~~~~g~~~TL~evF~~~~l~~~dltvd~Ldv~ad~~~f~rFd~ 633 (1001)
|+||||||+||+||+++.+|.++.++.-...|.. ...+.+.+.. .. .+ ..|..
T Consensus 1 ~lpK~elH~Hl~Gs~~~~~l~~~~~~~~~~~~~~---------~~~~~~~~~~--~~-~~---------------~~l~~ 53 (325)
T cd01320 1 NLPKAELHLHLDGSLRPETILELAKKNGITLPAS---------DVELLELVVA--AY-NF---------------SDLQD 53 (325)
T ss_pred CCCceEEeecccCCCCHHHHHHHHHHhCCCCCCC---------CHHHHHHHhc--cc-cC---------------CCHHH
Confidence 6899999999999999999999865431111100 0001111111 10 01 01111
Q ss_pred hhcccCCcchhHHHHHhhhhccCCCHHHHHHHHHHHHHHHHHcccceEEEEEecc-----CCChhH-HHHHHHHHHH-hC
Q psy47 634 FNAKYNPIGESRLREVFLKTDNYLGGTYFARIIKEVAADLEESKYQNAELRLSIY-----GKSEDE-WDKLATWAIE-SN 706 (1001)
Q Consensus 634 Fn~kY~p~g~~~Lr~iFlktdn~i~geYfa~iikEvi~dle~~k~qYaElR~siy-----G~s~~e-w~~la~w~~~-~~ 706 (1001)
|...| .....-....+.+.+.++.++.++.++|+.|+|+|++++ |.+.++ .+.+.+.+.+ ..
T Consensus 54 ~l~~~-----------~~~~~~~~~~ed~~~~~~~~~~e~~~~Gvt~~E~~~~p~~~~~~~~~~~~~~~~~~~ai~~~~~ 122 (325)
T cd01320 54 FLAKY-----------DFGLSVLQTEEDFERLAYEYLEDAAADGVVYAEIRFSPQLHTRRGLSFDEVVEAVLRGLDEAEA 122 (325)
T ss_pred HHHHH-----------HHHHHHhCCHHHHHHHHHHHHHHHHHcCCEEEEEEeCchhhccCCCCHHHHHHHHHHHHHHHHH
Confidence 11111 111222345679999999999999999999999999875 234444 2333333322 12
Q ss_pred ccccceeeEEEeccchhHHHhhHHHHHHHHHHHhhcccccccccCCCCchhhhhhcccceeEEeecCCCCCCCCCCccCC
Q psy47 707 VYSNNIRWLIQIPRLYDIFKSNKLINNFQEILQNIFKPLFEVTNDSSSHPHLHKFLQYVIGFDSVDDESKPENPLFDADV 786 (1001)
Q Consensus 707 l~s~~vRwlIqIpR~y~~~~a~~~v~~f~e~L~nIF~PLf~at~~p~~~~eL~~fl~~VvGfDLvgdEs~~~~~~f~~~~ 786 (1001)
-.+..+++++++.|..+.......++.+.. +.-..|+|+|++|+|..
T Consensus 123 ~~gi~~~l~~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~vvg~~l~~~~~~---------- 169 (325)
T cd01320 123 EFGIKARLILCGLRHLSPESAQETLELALK-----------------------YRDKGVVGFDLAGDEVG---------- 169 (325)
T ss_pred hcCCeEEEEEEecCCCCHHHHHHHHHHHHh-----------------------ccCCCEEEeecCCCCCC----------
Confidence 235678899998887665433332221110 01125899999998853
Q ss_pred CCCCCCCCCCCCchhHHHHHHHHHhhhchhhhhhcCCCCccccCCCChhh-------hh--c-----------cCCcch-
Q psy47 787 LTPPQWNLEENPCYAYYQYYTYANLTVLNQSTGRRSRRETNLQPGAYKAD-------AL--T-----------SKFPNA- 845 (1001)
Q Consensus 787 ~~P~~w~~~~nPp~~y~~~y~~ANi~~LN~~Rr~~GL~t~~lt~HaGEaG-------~l--L-----------r~~P~L- 845 (1001)
.++..+...+..| ++.|++ +++||||.+ ++ + ..+|.+
T Consensus 170 ----------~~~~~~~~~~~~A---------~~~g~~---v~~H~~E~~~~~~~~~a~~~~g~~~i~H~~~l~~~~~~~ 227 (325)
T cd01320 170 ----------FPPEKFVRAFQRA---------REAGLR---LTAHAGEAGGPESVRDALDLLGAERIGHGIRAIEDPELV 227 (325)
T ss_pred ----------CCHHHHHHHHHHH---------HHCCCc---eEEeCCCCCCHHHHHHHHHHcCCcccchhhccCccHHHH
Confidence 2456788889999 899999 999999973 11 1 124544
Q ss_pred hhhHhccCceEEEEecCccccccc--cccCCChHHHHHCCCcEEEcCCCccccCCCCCChHHHHHHHHHHcCCCHHHHHH
Q psy47 846 QDIYDHEITIRIAMSPLSNNSLFL--NYHRNPLPEYLARGLVVSLSTDDPLQFHFTKEPLMEEYSIAAQVWKLSSCDMCE 923 (1001)
Q Consensus 846 qyLyy~e~qIpLEvCPlSN~~l~~--~y~~HPf~~~~~~Gl~VsLsTDDPl~F~~T~t~L~eEY~iAa~~~~Ls~~DL~e 923 (1001)
+.+ +++||++++||+||..++. .+..||++.|+++|++|+||||||+.++ +++.+||..+++.++|+..+|.+
T Consensus 228 ~~l--~~~gi~v~~~P~sn~~l~~~~~~~~~p~~~l~~~Gv~v~lgTD~~~~~~---~~~~~e~~~~~~~~~l~~~el~~ 302 (325)
T cd01320 228 KRL--AERNIPLEVCPTSNVQTGAVKSLAEHPLRELLDAGVKVTINTDDPTVFG---TYLTDEYELLAEAFGLTEEELKK 302 (325)
T ss_pred HHH--HHcCCeEEECCCccccccccCCcccChHHHHHHCCCEEEECCCCCcccC---CCHHHHHHHHHHHcCCCHHHHHH
Confidence 778 8899999999999998875 5678999999999999999999999888 89999999999999999999999
Q ss_pred HHHHHHHHcCCChhhhc-ccc
Q psy47 924 LARNSVLMSGFPHGVAG-WDL 943 (1001)
Q Consensus 924 LArNSV~~Sf~~~~~K~-~Lg 943 (1001)
+++||+.+||.++++|+ ++.
T Consensus 303 ~~~na~~~~f~~~~~k~~~~~ 323 (325)
T cd01320 303 LARNAVEASFLSEEEKAELLK 323 (325)
T ss_pred HHHHHHHHhCCCHHHHHHHHh
Confidence 99999999999999999 654
No 23
>TIGR01224 hutI imidazolonepropionase. This enzyme catalyzes the third step in histidine degradation.
Probab=98.92 E-value=5.5e-08 Score=109.30 Aligned_cols=223 Identities=12% Similarity=0.017 Sum_probs=144.4
Q ss_pred CCHHHHHHHHHHHHHHHHHcccceEEEEEeccCCChhHHHHHHHHHHHhCc-cccceeeEEEeccchhHHH-h--hHHHH
Q psy47 657 LGGTYFARIIKEVAADLEESKYQNAELRLSIYGKSEDEWDKLATWAIESNV-YSNNIRWLIQIPRLYDIFK-S--NKLIN 732 (1001)
Q Consensus 657 i~geYfa~iikEvi~dle~~k~qYaElR~siyG~s~~ew~~la~w~~~~~l-~s~~vRwlIqIpR~y~~~~-a--~~~v~ 732 (1001)
++.+.+...++..+.++.++|+.|+|++. -+|...++-..+.+.+.+.+. ....+.++....+.++... . ...+.
T Consensus 88 ~~~ed~~~~a~~~~~e~l~~Gvt~ve~~~-~~g~~~~~~~~~~~a~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (377)
T TIGR01224 88 ASEEELLKLALFRLKSMLRSGTTTAEVKS-GYGLDLETELKMLRAAKALHEEQPVDVVTTFLGAHAVPPEFQGRPDDYVD 166 (377)
T ss_pred CCHHHHHHHHHHHHHHHHHCCceEEEecc-cCCCCHHHHHHHHHHHHHHHhhCCCceEeeeeecccCCccccCCHHHHHH
Confidence 45678999999999999999999998873 355544432233333333111 2234444433222222110 0 00011
Q ss_pred H-HHHHHHhhcccccccccCCCCchhhhhhcccceeEEeecCCCCCCCCCCccCCCCCCCCCCCCCCchhHHHHHHHHHh
Q psy47 733 N-FQEILQNIFKPLFEVTNDSSSHPHLHKFLQYVIGFDSVDDESKPENPLFDADVLTPPQWNLEENPCYAYYQYYTYANL 811 (1001)
Q Consensus 733 ~-f~e~L~nIF~PLf~at~~p~~~~eL~~fl~~VvGfDLvgdEs~~~~~~f~~~~~~P~~w~~~~nPp~~y~~~y~~ANi 811 (1001)
. ..+.++ .. .....|.|+|+.|.+.. .++..+...+..|
T Consensus 167 ~~~~~~~~-----------------~~-~~~~~v~~~~~~~~~~~--------------------~~~~~~~~~~~~A-- 206 (377)
T TIGR01224 167 GICEELIP-----------------QV-AEEGLASFADVFCEAGV--------------------FSVEQSRRILQAA-- 206 (377)
T ss_pred HHHHHHHH-----------------HH-HHhCCCCeeEEEecCCC--------------------cCHHHHHHHHHHH--
Confidence 0 001110 00 00124899999987742 3456677888888
Q ss_pred hhchhhhhhcCCCCccccCCCChhh----h--hc-----------cCCcch-hhhHhccCceEEEEecCccccccccccC
Q psy47 812 TVLNQSTGRRSRRETNLQPGAYKAD----A--LT-----------SKFPNA-QDIYDHEITIRIAMSPLSNNSLFLNYHR 873 (1001)
Q Consensus 812 ~~LN~~Rr~~GL~t~~lt~HaGEaG----~--lL-----------r~~P~L-qyLyy~e~qIpLEvCPlSN~~l~~~y~~ 873 (1001)
+++|++ ++.||+|.+ + +. ..++.. +.+ ++.+|.+++||+||..++. ..
T Consensus 207 -------~~~g~~---v~~H~~e~~~~~~~~~~~~~g~~~~~H~~~~~~~~l~~l--a~~g~~~~~~P~~~~~l~~--~~ 272 (377)
T TIGR01224 207 -------QEAGLP---VKLHAEELSNLGGAELAAKLGAVSADHLEHASDAGIKAL--AEAGTVAVLLPGTTFYLRE--TY 272 (377)
T ss_pred -------HHCCCC---EEEEecCCCCCCHHHHHHHcCCCccHHHhcCCHHHHHHH--HhcCCEEEECchHHHhcCC--cC
Confidence 899999 999998862 1 10 124444 777 8899999999999988763 56
Q ss_pred CChHHHHHCCCcEEEcCCC-ccccCCCCCChHHHHHHHHHHcCCCHHHHHH-HHHHHHHHcCCCh
Q psy47 874 NPLPEYLARGLVVSLSTDD-PLQFHFTKEPLMEEYSIAAQVWKLSSCDMCE-LARNSVLMSGFPH 936 (1001)
Q Consensus 874 HPf~~~~~~Gl~VsLsTDD-Pl~F~~T~t~L~eEY~iAa~~~~Ls~~DL~e-LArNSV~~Sf~~~ 936 (1001)
+|++.++++|++|+++||. |+... ...+..++..++...+++..++.+ ...|+....++++
T Consensus 273 ~p~~~l~~~Gv~v~lgTD~~~~~~~--~~~~~~~~~~~~~~~~ls~~eal~~~T~~~A~~lg~~~ 335 (377)
T TIGR01224 273 PPARQLIDYGVPVALATDLNPGSSP--TLSMQLIMSLACRLMKMTPEEALHAATVNAAYALGLGE 335 (377)
T ss_pred ccHHHHHHCCCCEEEECCCCCCCCh--hHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhCCCC
Confidence 8999999999999999995 42222 135777777777888999999988 5579999988764
No 24
>COG1816 Add Adenosine deaminase [Nucleotide transport and metabolism]
Probab=98.82 E-value=8.5e-10 Score=124.05 Aligned_cols=138 Identities=17% Similarity=0.056 Sum_probs=120.5
Q ss_pred CCCcccccccCCccccccccccccCCCCCchhhhhhhhccCCCCCcchHHHHHHHHHHhhhhhccccceeeeeeecCChh
Q psy47 314 TISNLSNEKSDRNTFHRFDKFNAKYNPIGESRLREVFLKTDNYLGGTYFARIIKEVAADLEESKYQNAELRLSIYGKSED 393 (1001)
Q Consensus 314 ~~~d~l~~~a~~~~f~rfd~fn~kynp~g~~~lr~iflk~dn~i~G~y~Ae~~k~v~~~le~skyq~~e~r~siyg~~~~ 393 (1001)
+..+.++.|+.+..+||+..+|.++++++....|..+.++.+...+.+++++.++......-.+|+.+..++.-++++.+
T Consensus 2 ~~~~~~~~~~pkaelH~HL~g~l~p~~v~~la~r~gi~~~~~~~~~~~~~~~~~~~~~~~~l~~fl~~~y~~~~v~~~~~ 81 (345)
T COG1816 2 MDILELIRHLPKAELHRHLEGSLRPELVLELARRYGIALPPAEFDETILEELRAEYNKFNDLQEFLEKYYRGASVLRTEE 81 (345)
T ss_pred cchHHHHhhchhhHhhhcccCCcCHHHHHHHHHHhCccCCcccccchhHHHHHHHHhccccHHHHHHHHHHHHHhhccHH
Confidence 35578899999999999999999999999999999999999988899999887766634444556677777777888999
Q ss_pred HHHHHhhhHhhCcccCCCceeeeccCceeeeccccchhhhHHHHHHhhccccccccccCC
Q psy47 394 EWDKLATWAIESNVYSNNIRWLIQIPRLYDIFKSNKLINNFQEILQNIFKPLFEVDTHIH 453 (1001)
Q Consensus 394 eW~~la~W~~~~~~~s~n~rW~iqiprly~~~~~~~~v~~F~~~l~niF~Plfe~~~~~h 453 (1001)
+|.+||.|.+++...+.+++|.||++| |...+..+.+++|++.+.++|.|+ +.+...|
T Consensus 82 ~~~~la~~~~~~~~~~~~vy~Ei~f~p-~~~t~~~l~~~~~~e~~~~~~~~~-~~~~gi~ 139 (345)
T COG1816 82 DFYRLAYEYLEDAAADNVVYAEIRFDP-YLHTKRGLSVDTVVEGLIAGFRPA-ERDFGIH 139 (345)
T ss_pred HHHHHHHHHHHHHHhcCCeEEEEEeCc-chhhhccCCHHHHHHHHHHHHHHH-hhccCCc
Confidence 999999999999999999999999999 999999999999999999999999 4444333
No 25
>cd01296 Imidazolone-5PH Imidazolonepropionase/imidazolone-5-propionate hydrolase (Imidazolone-5PH) catalyzes the third step in the histidine degradation pathway, the hydrolysis of (S)-3-(5-oxo-4,5-dihydro-3H-imidazol-4-yl)propanoate to N-formimidoyl-L-glutamate. In bacteria, the enzyme is part of histidine utilization (hut) operon.
Probab=98.75 E-value=4e-07 Score=102.06 Aligned_cols=220 Identities=12% Similarity=0.019 Sum_probs=141.8
Q ss_pred HHHHHHHHHHHHHHHHHcccceEEEEEeccCCChhHHHHHHHHHHHhCccccceeeEEEec-cchhHHHh---hHHHHH-
Q psy47 659 GTYFARIIKEVAADLEESKYQNAELRLSIYGKSEDEWDKLATWAIESNVYSNNIRWLIQIP-RLYDIFKS---NKLINN- 733 (1001)
Q Consensus 659 geYfa~iikEvi~dle~~k~qYaElR~siyG~s~~ew~~la~w~~~~~l~s~~vRwlIqIp-R~y~~~~a---~~~v~~- 733 (1001)
.+.+.+.+++.+.++.++|+.|+|.+.. ++.+.+.-..+.+.+.+-+.. ..+.+.+++. |...+... ...+..
T Consensus 87 ~~d~~~~a~~~~~~~~~~Gvt~~~~~~~-~~~~~~~~~~~~~a~~~~~~~-~~~~l~~~~~~~~~~p~~~~~~~~~~~~~ 164 (371)
T cd01296 87 EDELFASALRRLARMLRHGTTTVEVKSG-YGLDLETELKMLRVIRRLKEE-GPVDLVSTFLGAHAVPPEYKGREEYIDLV 164 (371)
T ss_pred HHHHHHHHHHHHHHHHHCCceEEEeccc-CCCCHHHHHHHHHHHHHHHhh-CCCceEeeeeecccCCcccCChHHHHHHH
Confidence 4678888999999999999999988632 344433322223333321211 1233444444 33222100 000000
Q ss_pred HHHHHHhhcccccccccCCCCchhhhhhcccceeEEeecCCCCCCCCCCccCCCCCCCCCCCCCCchhHHHHHHHHHhhh
Q psy47 734 FQEILQNIFKPLFEVTNDSSSHPHLHKFLQYVIGFDSVDDESKPENPLFDADVLTPPQWNLEENPCYAYYQYYTYANLTV 813 (1001)
Q Consensus 734 f~e~L~nIF~PLf~at~~p~~~~eL~~fl~~VvGfDLvgdEs~~~~~~f~~~~~~P~~w~~~~nPp~~y~~~y~~ANi~~ 813 (1001)
-.+.++ ..+ ....+.|+|+.+.+.. .++......+..|
T Consensus 165 ~~~~~~-----------------~~~-~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~A---- 202 (371)
T cd01296 165 IEEVLP-----------------AVA-EENLADFCDVFCEKGA--------------------FSLEQSRRILEAA---- 202 (371)
T ss_pred HHHHHH-----------------HHH-HhCCCCEEEEeecCCc--------------------cCHHHHHHHHHHH----
Confidence 011110 000 0135889999887642 2355677888888
Q ss_pred chhhhhhcCCCCccccCCCChhh----h--hc-----------cCCcch-hhhHhccCceEEEEecCccccccccccCCC
Q psy47 814 LNQSTGRRSRRETNLQPGAYKAD----A--LT-----------SKFPNA-QDIYDHEITIRIAMSPLSNNSLFLNYHRNP 875 (1001)
Q Consensus 814 LN~~Rr~~GL~t~~lt~HaGEaG----~--lL-----------r~~P~L-qyLyy~e~qIpLEvCPlSN~~l~~~y~~HP 875 (1001)
+++|+. ++.||+|.+ + .. ..++.. +.+ ++.+|.+++||+||..++.. .+|
T Consensus 203 -----~~~g~~---v~~H~~e~~~~~~~~~~~~~g~~~i~H~~~~~~~~i~~l--a~~g~~v~~~P~~~~~l~~~--~~~ 270 (371)
T cd01296 203 -----KEAGLP---VKIHADELSNIGGAELAAELGALSADHLEHTSDEGIAAL--AEAGTVAVLLPGTAFSLRET--YPP 270 (371)
T ss_pred -----HHCCCe---EEEEEcCcCCCCHHHHHHHcCCCeeHHhcCCCHHHHHHH--HHcCCeEEEChHHHHHhCCC--CCC
Confidence 899999 999999862 1 00 124544 777 88999999999999876643 689
Q ss_pred hHHHHHCCCcEEEcCCC-ccccCCCCCChHHHHHHHHHHcCCCHHHHHHH-HHHHHHHcCCCh
Q psy47 876 LPEYLARGLVVSLSTDD-PLQFHFTKEPLMEEYSIAAQVWKLSSCDMCEL-ARNSVLMSGFPH 936 (1001)
Q Consensus 876 f~~~~~~Gl~VsLsTDD-Pl~F~~T~t~L~eEY~iAa~~~~Ls~~DL~eL-ArNSV~~Sf~~~ 936 (1001)
++.++++|++|+++||. |..+. ...+..++..+....+++..++.++ +.|+.+..+.++
T Consensus 271 ~~~l~~~Gv~v~lgsD~~p~~~~--~~~l~~~~~~~~~~~~l~~~~al~~aT~~~A~~lg~~~ 331 (371)
T cd01296 271 ARKLIDAGVPVALGTDFNPGSSP--TSSMPLVMHLACRLMRMTPEEALTAATINAAAALGLGE 331 (371)
T ss_pred HHHHHHCCCcEEEecCCCCCCCh--HHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhCCCC
Confidence 99999999999999995 65443 1348889999888899999998755 579999988753
No 26
>PRK09230 cytosine deaminase; Provisional
Probab=98.59 E-value=1.5e-06 Score=100.77 Aligned_cols=222 Identities=12% Similarity=0.095 Sum_probs=135.1
Q ss_pred cCCCHHHHHHHHHHHHHHHHHcccceEEEEEeccCCChhHHHHHHHHHHHhCccccceeeEEEeccc--hhHHHhhHHHH
Q psy47 655 NYLGGTYFARIIKEVAADLEESKYQNAELRLSIYGKSEDEWDKLATWAIESNVYSNNIRWLIQIPRL--YDIFKSNKLIN 732 (1001)
Q Consensus 655 n~i~geYfa~iikEvi~dle~~k~qYaElR~siyG~s~~ew~~la~w~~~~~l~s~~vRwlIqIpR~--y~~~~a~~~v~ 732 (1001)
...+.+.++..+...+.++..+|+.++|.++.++.....-|+.+.+...+++- ...+. +..+++. ++..... .
T Consensus 93 ~~~t~ed~~~~a~~~~~e~l~~GvTtvr~~~d~~~~~~~~~~a~~~~~~~~~~-~~~~~-i~a~~~~~~~~~~~~~---~ 167 (426)
T PRK09230 93 ALLTHEDVKQRAWQTLKWQIANGIQHVRTHVDVSDPTLTALKAMLEVKEEVAP-WVDLQ-IVAFPQEGILSYPNGE---A 167 (426)
T ss_pred hcCCHHHHHHHHHHHHHHHHHcCcccEEeccccCCcchhHHHHHHHHHHHhhC-cceEE-EEeccCccccCCccHH---H
Confidence 34567899999999999999999999999998754333446666555433221 01222 4445544 2111111 1
Q ss_pred HHHHHHHhhcccccccccCCCCchhhhhhcccceeEEeecCCCCCCCCCCccCCCCCCCCCCCCCCchhHHHHHHHHHhh
Q psy47 733 NFQEILQNIFKPLFEVTNDSSSHPHLHKFLQYVIGFDSVDDESKPENPLFDADVLTPPQWNLEENPCYAYYQYYTYANLT 812 (1001)
Q Consensus 733 ~f~e~L~nIF~PLf~at~~p~~~~eL~~fl~~VvGfDLvgdEs~~~~~~f~~~~~~P~~w~~~~nPp~~y~~~y~~ANi~ 812 (1001)
.+.+.++ .....++|++.+.. +.+.++..+...|..|
T Consensus 168 ~l~~a~~--------------------~~~~~vg~~p~~~~--------------------~~~~~~e~l~~~~~~A--- 204 (426)
T PRK09230 168 LLEEALR--------------------LGADVVGAIPHFEF--------------------TREYGVESLHKAFALA--- 204 (426)
T ss_pred HHHHHHH--------------------cCCCEEeCCCCccc--------------------cchhHHHHHHHHHHHH---
Confidence 1111111 00011222221111 1234677889999999
Q ss_pred hchhhhhhcCCCCccccCCCChhh---------hh-------cc----------C-------Ccch-hhhHhccCceEEE
Q psy47 813 VLNQSTGRRSRRETNLQPGAYKAD---------AL-------TS----------K-------FPNA-QDIYDHEITIRIA 858 (1001)
Q Consensus 813 ~LN~~Rr~~GL~t~~lt~HaGEaG---------~l-------Lr----------~-------~P~L-qyLyy~e~qIpLE 858 (1001)
+++|++ ++.|++|.+ +. +. . ++.. +.| +++||++.
T Consensus 205 ------~~~g~~---~~~H~~E~~~~~~~~~~~~~~~~~~~gl~~~v~~~H~~~l~~~~~~~~~~~~~~L--a~~gv~vv 273 (426)
T PRK09230 205 ------QKYDRL---IDVHCDEIDDEQSRFVETVAALAHREGMGARVTASHTTAMHSYNGAYTSRLFRLL--KMSGINFV 273 (426)
T ss_pred ------HHhCCC---cEEEECCCCCcchHHHHHHHHHHHHhCCCCCEEEEecCchhcCCHHHHHHHHHHH--HHcCCeEE
Confidence 999999 999999962 00 00 0 2334 778 88999999
Q ss_pred EecCccccccccccCCC-------hHHHHHCCCcEEEcCCCcc-ccC-CCCCChHHHHHHHHHHc---CCC-HHHHHHHH
Q psy47 859 MSPLSNNSLFLNYHRNP-------LPEYLARGLVVSLSTDDPL-QFH-FTKEPLMEEYSIAAQVW---KLS-SCDMCELA 925 (1001)
Q Consensus 859 vCPlSN~~l~~~y~~HP-------f~~~~~~Gl~VsLsTDDPl-~F~-~T~t~L~eEY~iAa~~~---~Ls-~~DL~eLA 925 (1001)
.||+||..|+.....|| +++|.++|++|+|+|||+. .|. +....+.++...++... +.+ ..++.+++
T Consensus 274 ~cP~sn~~l~~~~~~~p~~~g~~pi~~l~~aGv~V~lGTD~~~d~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~l~ma 353 (426)
T PRK09230 274 ANPLVNIHLQGRFDTYPKRRGITRVKEMLEAGINVCFGHDDVFDPWYPLGTANMLQVLHMGLHVCQLMGYGQINDGLNLI 353 (426)
T ss_pred ECcchhhhhcCCCCCCCCCCCCcCHHHHHHCCCeEEEecCCCCCCCcCCCCCCHHHHHHHHHHHHhhCChhhHHHHHHHH
Confidence 99999998875444454 9999999999999999976 332 11246777766654322 221 34555544
Q ss_pred -HHHHHHcCCC
Q psy47 926 -RNSVLMSGFP 935 (1001)
Q Consensus 926 -rNSV~~Sf~~ 935 (1001)
.|+.++-+++
T Consensus 354 T~~gA~alg~~ 364 (426)
T PRK09230 354 TTHSARTLNLQ 364 (426)
T ss_pred hcchhHHhCCC
Confidence 4777776654
No 27
>cd01292 metallo-dependent_hydrolases Superfamily of metallo-dependent hydrolases (also called amidohydrolase superfamily) is a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site. The vast majority of the members have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. The family includes urease alpha, adenosine deaminase, phosphotriesterase dihydroorotases, allantoinases, hydantoinases, AMP-, adenine and cytosine deaminases, imidazolonepropionase, aryldialkylphosphatase, chlorohydrolases, formylmethanofuran dehydrogenases and others.
Probab=98.53 E-value=6.7e-06 Score=85.31 Aligned_cols=219 Identities=16% Similarity=0.063 Sum_probs=143.4
Q ss_pred cCCCHHHHHHHHHHHHHHHHHcccceEEEEEeccCC--ChhHHHHHHHHHHHhCccccceeeEEEeccchhHHHhhHHHH
Q psy47 655 NYLGGTYFARIIKEVAADLEESKYQNAELRLSIYGK--SEDEWDKLATWAIESNVYSNNIRWLIQIPRLYDIFKSNKLIN 732 (1001)
Q Consensus 655 n~i~geYfa~iikEvi~dle~~k~qYaElR~siyG~--s~~ew~~la~w~~~~~l~s~~vRwlIqIpR~y~~~~a~~~v~ 732 (1001)
.....+++....+..+.++.+.|+..+.......+. ..+.++.+.++..... +..+.+...+.+..... ......
T Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~Gvttv~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~-~~~~~~ 102 (275)
T cd01292 26 EELSPEDLYEDTLRALEALLAGGVTTVVDMGSTPPPTTTKAAIEAVAEAARASA--GIRVVLGLGIPGVPAAV-DEDAEA 102 (275)
T ss_pred cccCHHHHHHHHHHHHHHHHhcCceEEEeeEeecCccccchHHHHHHHHHHHhc--CeeeEEeccCCCCcccc-chhHHH
Confidence 345567888888999999999999999887765432 2233566666665531 23455555555443221 011111
Q ss_pred HHHHHHHhhcccccccccCCCCchhhhhhcccceeEEeecCCCCCCCCCCccCCCCCCCCCCCCCCchhHHHHHHHHHhh
Q psy47 733 NFQEILQNIFKPLFEVTNDSSSHPHLHKFLQYVIGFDSVDDESKPENPLFDADVLTPPQWNLEENPCYAYYQYYTYANLT 812 (1001)
Q Consensus 733 ~f~e~L~nIF~PLf~at~~p~~~~eL~~fl~~VvGfDLvgdEs~~~~~~f~~~~~~P~~w~~~~nPp~~y~~~y~~ANi~ 812 (1001)
...+.+.. + .-.+++|+++.+.+... ..++..+...+..|
T Consensus 103 ~~~~~i~~-----------------~--~~~~~~gi~~~~~~~~~------------------~~~~~~~~~~~~~a--- 142 (275)
T cd01292 103 LLLELLRR-----------------G--LELGAVGLKLAGPYTAT------------------GLSDESLRRVLEEA--- 142 (275)
T ss_pred HHHHHHHH-----------------H--HhcCCeeEeeCCCCCCC------------------CCCcHHHHHHHHHH---
Confidence 11111110 0 00268999988876421 13456788888888
Q ss_pred hchhhhhhcCCCCccccCCCChhhh----h---c---c------------CCcch-hhhHhccCceEEEEecCccccccc
Q psy47 813 VLNQSTGRRSRRETNLQPGAYKADA----L---T---S------------KFPNA-QDIYDHEITIRIAMSPLSNNSLFL 869 (1001)
Q Consensus 813 ~LN~~Rr~~GL~t~~lt~HaGEaG~----l---L---r------------~~P~L-qyLyy~e~qIpLEvCPlSN~~l~~ 869 (1001)
++.|+. +++||++... + + + .++.. +.+ ++.++.+++||.+|..++.
T Consensus 143 ------~~~~~~---i~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~--~~~g~~~~~~~~~~~~~~~ 211 (275)
T cd01292 143 ------RKLGLP---VVIHAGELPDPTRALEDLVALLRLGGRVVIGHVSHLDPELLELL--KEAGVSLEVCPLSNYLLGR 211 (275)
T ss_pred ------HHcCCe---EEEeeCCcccCccCHHHHHHHHhcCCCEEEECCccCCHHHHHHH--HHcCCeEEECCcccccccC
Confidence 888998 9999987531 1 0 0 12333 566 7789999999999976521
Q ss_pred -cccCCChHHHHHCCCcEEEcCCCccccCCCCCChHHHHHHHHHHcC--CCHHHHHHH-HHHHH
Q psy47 870 -NYHRNPLPEYLARGLVVSLSTDDPLQFHFTKEPLMEEYSIAAQVWK--LSSCDMCEL-ARNSV 929 (1001)
Q Consensus 870 -~y~~HPf~~~~~~Gl~VsLsTDDPl~F~~T~t~L~eEY~iAa~~~~--Ls~~DL~eL-ArNSV 929 (1001)
.....|+..+++.|.+++|+||.|.... ...+..++..++...+ ++..++.++ +.|+.
T Consensus 212 ~~~~~~~~~~~~~~g~~~~lgTD~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~n~a 273 (275)
T cd01292 212 DGEGAEALRRLLELGIRVTLGTDGPPHPL--GTDLLALLRLLLKVLRLGLSLEEALRLATINPA 273 (275)
T ss_pred CcCCcccHHHHHHCCCcEEEecCCCCCCC--CCCHHHHHHHHHHHHhcCCCHHHHHHHHhcccc
Confidence 2346799999999999999999998731 2688999999887766 599998887 55653
No 28
>cd01305 archeal_chlorohydrolases Predicted chlorohydrolases. These metallo-dependent hydrolases from archea are part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site. They have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. Some members of this subgroup are predicted to be chlorohyrolases.
Probab=98.25 E-value=2.3e-06 Score=92.16 Aligned_cols=105 Identities=19% Similarity=0.215 Sum_probs=84.6
Q ss_pred HHHHHHHHHhhhchhhhhhcCCCCccccCCCChhhh------h---c-----------cCCc-chhhhHhccCceEEEEe
Q psy47 802 YYQYYTYANLTVLNQSTGRRSRRETNLQPGAYKADA------L---T-----------SKFP-NAQDIYDHEITIRIAMS 860 (1001)
Q Consensus 802 y~~~y~~ANi~~LN~~Rr~~GL~t~~lt~HaGEaG~------l---L-----------r~~P-~LqyLyy~e~qIpLEvC 860 (1001)
+...+..| +++|+. ++.||+|.+. + + ..++ .++.+ ++.|+.+.+|
T Consensus 127 l~~~~~~A---------~~~g~~---v~~H~~e~~~~~g~~~i~~~~~~~~~~i~H~~~l~~~~~~~l--a~~g~~v~~~ 192 (263)
T cd01305 127 LEDILELL---------RRRGKL---FAIHASETRESVGMTDIERALDLEPDLLVHGTHLTDEDLELV--RENGVPVVLC 192 (263)
T ss_pred HHHHHHHH---------HHCCCe---eEEecCCCCCCCCchhHHHHHhCCCCEEEEcCCCCHHHHHHH--HHcCCcEEEC
Confidence 67788888 999999 9999998631 1 0 1133 34778 8999999999
Q ss_pred cCccccccccccCCChHHHHHCCCcEEEcCCCccccCCCCCChHHHHHHHHHHcCC----CHHHHHHHH
Q psy47 861 PLSNNSLFLNYHRNPLPEYLARGLVVSLSTDDPLQFHFTKEPLMEEYSIAAQVWKL----SSCDMCELA 925 (1001)
Q Consensus 861 PlSN~~l~~~y~~HPf~~~~~~Gl~VsLsTDDPl~F~~T~t~L~eEY~iAa~~~~L----s~~DL~eLA 925 (1001)
|+||..++. ...|+++|+++|++|+|+||++.... .++.+|+..++...++ +..++.+++
T Consensus 193 P~sn~~l~~--g~~p~~~l~~~Gv~v~lGtD~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~~a 256 (263)
T cd01305 193 PRSNLYFGV--GIPPVAELLKLGIKVLLGTDNVMVNE---PDMWAEMEFLAKYSRLQGYLSPLEILRMA 256 (263)
T ss_pred hhhHHHhCC--CCCCHHHHHHCCCcEEEECCCCccCC---CCHHHHHHHHHHHhcccccCCHHHHHHHH
Confidence 999987765 45799999999999999999987555 7899999999988877 777766654
No 29
>PRK07213 chlorohydrolase; Provisional
Probab=98.21 E-value=3.8e-06 Score=95.48 Aligned_cols=119 Identities=15% Similarity=0.215 Sum_probs=95.1
Q ss_pred CchhHHHHHHHHHhhhchhhhhhcCCCCccccCCCChhh----------------------hh---c----cCC-cchhh
Q psy47 798 PCYAYYQYYTYANLTVLNQSTGRRSRRETNLQPGAYKAD----------------------AL---T----SKF-PNAQD 847 (1001)
Q Consensus 798 Pp~~y~~~y~~ANi~~LN~~Rr~~GL~t~~lt~HaGEaG----------------------~l---L----r~~-P~Lqy 847 (1001)
++..+...+..| +++|+. ++.||+|.. +. + ..+ ..++.
T Consensus 177 s~~~l~~~~~~A---------~~~g~~---v~~H~~e~~~e~~~~~~~~G~~~v~~~~~~G~~~~~i~H~~~~~~~~i~~ 244 (375)
T PRK07213 177 SDEELKFICKEC---------KREKKI---FSIHAAEHKGSVEYSLEKYGMTEIERLINLGFKPDFIVHATHPSNDDLEL 244 (375)
T ss_pred CHHHHHHHHHHH---------HHcCCE---EEEeeCCchhHHHHHHHHcCCChHHHHHhcCCCCCEEEECCCCCHHHHHH
Confidence 456777888888 889999 999998852 11 0 012 24577
Q ss_pred hHhccCceEEEEecCccccccccccCCChHHHHHCCCcEEEcCCCccccCCCCCChHHHHHHHHHHcCCCHHHHHHHH-H
Q psy47 848 IYDHEITIRIAMSPLSNNSLFLNYHRNPLPEYLARGLVVSLSTDDPLQFHFTKEPLMEEYSIAAQVWKLSSCDMCELA-R 926 (1001)
Q Consensus 848 Lyy~e~qIpLEvCPlSN~~l~~~y~~HPf~~~~~~Gl~VsLsTDDPl~F~~T~t~L~eEY~iAa~~~~Ls~~DL~eLA-r 926 (1001)
+ +++++.+..||+||..++.. -.|+++++++|++|+|+||++...+ ..+.+|+..++..++++..++.++| .
T Consensus 245 l--a~~g~~v~~~P~sn~~l~~g--~~~v~~l~~~Gv~v~lGTD~~~~~~---~~~~~e~~~~~~~~~~~~~~~l~~aT~ 317 (375)
T PRK07213 245 L--KENNIPVVVCPRANASFNVG--LPPLNEMLEKGILLGIGTDNFMANS---PSIFREMEFIYKLYHIEPKEILKMATI 317 (375)
T ss_pred H--HHcCCcEEECCcchhhhccC--CccHHHHHHCCCEEEEeeCCCCCch---HhHHHHHHHHHHHhCcCHHHHHHHHHH
Confidence 7 88999999999999987753 4799999999999999999976444 5789999999988899999988876 6
Q ss_pred HHHHHcCCC
Q psy47 927 NSVLMSGFP 935 (1001)
Q Consensus 927 NSV~~Sf~~ 935 (1001)
|+.+.-+.+
T Consensus 318 ~gA~~lg~~ 326 (375)
T PRK07213 318 NGAKILGLI 326 (375)
T ss_pred HHHHHhCCC
Confidence 888887764
No 30
>cd01293 Bact_CD Bacterial cytosine deaminase and related metal-dependent hydrolases. Cytosine deaminases (CDs) catalyze the deamination of cytosine, producing uracil and ammonia. They play an important role in pyrimidine salvage. CDs are present in prokaryotes and fungi, but not mammalian cells. The bacterial enzymes, but not the fungal enzymes, are related to the adenosine deaminases (ADA). The bacterial enzymes are iron dependent and hexameric.
Probab=97.78 E-value=0.00079 Score=75.66 Aligned_cols=221 Identities=14% Similarity=0.065 Sum_probs=127.2
Q ss_pred CCCHHHHHHHHHHHHHHHHHcccceEEEEEeccCC-ChhHHHHHHHHHHHhCccccceeeEEEeccchhHHHhhHHHHHH
Q psy47 656 YLGGTYFARIIKEVAADLEESKYQNAELRLSIYGK-SEDEWDKLATWAIESNVYSNNIRWLIQIPRLYDIFKSNKLINNF 734 (1001)
Q Consensus 656 ~i~geYfa~iikEvi~dle~~k~qYaElR~siyG~-s~~ew~~la~w~~~~~l~s~~vRwlIqIpR~y~~~~a~~~v~~f 734 (1001)
.+..+++...+...+.++.++|+.+++....++.. ....|+.+.++....+. ........+++... +......+.+
T Consensus 88 ~~t~~~~~~~~~~~~~~~l~~GvTtv~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~-~~~~~~~~~v 164 (398)
T cd01293 88 LLTAEDVKERAERALELAIAHGTTAIRTHVDVDPAAGLKALEALLELREEWAD--LIDLQIVAFPQHGL-LSTPGGEELM 164 (398)
T ss_pred ccChHHHHHHHHHHHHHHHHcChhheeeeecccccccchHHHHHHHHHHHhhc--cceEEEEeccCccc-cCCCCHHHHH
Confidence 45667888888888999999999998766654422 22235565555443221 11122334444210 0001111111
Q ss_pred HHHHHhhcccccccccCCCCchhhhhhcccceeEEeecCCCCCCCCCCccCCCCCCCCCCCCCCchhHHHHHHHHHhhhc
Q psy47 735 QEILQNIFKPLFEVTNDSSSHPHLHKFLQYVIGFDSVDDESKPENPLFDADVLTPPQWNLEENPCYAYYQYYTYANLTVL 814 (1001)
Q Consensus 735 ~e~L~nIF~PLf~at~~p~~~~eL~~fl~~VvGfDLvgdEs~~~~~~f~~~~~~P~~w~~~~nPp~~y~~~y~~ANi~~L 814 (1001)
.+.++ .-...+.|++..+. ...++..+...+..|
T Consensus 165 ~~~~~--------------------~g~~~~~~~~~~~~---------------------~~~s~e~l~~~~~~A----- 198 (398)
T cd01293 165 REALK--------------------MGADVVGGIPPAEI---------------------DEDGEESLDTLFELA----- 198 (398)
T ss_pred HHHHH--------------------hCCCEEeCCCCCcC---------------------CccHHHHHHHHHHHH-----
Confidence 11110 00001112221110 123456777888888
Q ss_pred hhhhhhcCCCCccccCCCChhh---------hh--------c-c---C-----C---c----c-hhhhHhccCceEEEEe
Q psy47 815 NQSTGRRSRRETNLQPGAYKAD---------AL--------T-S---K-----F---P----N-AQDIYDHEITIRIAMS 860 (1001)
Q Consensus 815 N~~Rr~~GL~t~~lt~HaGEaG---------~l--------L-r---~-----~---P----~-LqyLyy~e~qIpLEvC 860 (1001)
+++|+. ++.|++|.+ .+ + + . + + . ++.+ +++++++..|
T Consensus 199 ----~~~g~~---v~~H~~e~~~~~~~~~~~~~~~~~~~g~~~~~~i~H~~~~~~~~~~~~~~~~~~l--~~~g~~v~~~ 269 (398)
T cd01293 199 ----QEHGLD---IDLHLDETDDPGSRTLEELAEEAERRGMQGRVTCSHATALGSLPEAEVSRLADLL--AEAGISVVSL 269 (398)
T ss_pred ----HHhCCC---CEEEeCCCCCcchhHHHHHHHHHHHhCCCCCEEeeecchhhcCCHHHHHHHHHHH--HHcCCeEEeC
Confidence 899999 999998862 01 0 0 0 1 1 2 4677 8899999999
Q ss_pred cCccccccc-------cccCCChHHHHHCCCcEEEcCCCcc--ccCCCCCChHHHHHHHHHHcCCCH----HHHHHHH-H
Q psy47 861 PLSNNSLFL-------NYHRNPLPEYLARGLVVSLSTDDPL--QFHFTKEPLMEEYSIAAQVWKLSS----CDMCELA-R 926 (1001)
Q Consensus 861 PlSN~~l~~-------~y~~HPf~~~~~~Gl~VsLsTDDPl--~F~~T~t~L~eEY~iAa~~~~Ls~----~DL~eLA-r 926 (1001)
|.||..+.. .-...|++.+.++|++|+++||.+. ...+....+.++...++...+++. .+..++| .
T Consensus 270 p~s~~~l~~~~~~~~~~~~~~~~~~~~~~Gv~v~lGTD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~aT~ 349 (398)
T cd01293 270 PPINLYLQGREDTTPKRRGVTPVKELRAAGVNVALGSDNVRDPWYPFGSGDMLEVANLAAHIAQLGTPEDLALALDLITG 349 (398)
T ss_pred CCcchhhcccccCCCCCCCCCcHHHHHHCCCeEEECCCCCCCCCcCCCCCCHHHHHHHHHHHHcCCChhhHHHHHHhcCh
Confidence 999987621 1235799999999999999999742 111222478899988888788844 2333333 4
Q ss_pred HHHHHcCC
Q psy47 927 NSVLMSGF 934 (1001)
Q Consensus 927 NSV~~Sf~ 934 (1001)
|+..+.+.
T Consensus 350 ~~A~~lg~ 357 (398)
T cd01293 350 NAARALGL 357 (398)
T ss_pred hhhhhcCC
Confidence 55555554
No 31
>PRK06886 hypothetical protein; Validated
Probab=97.45 E-value=0.0008 Score=76.24 Aligned_cols=124 Identities=16% Similarity=0.149 Sum_probs=90.0
Q ss_pred CCchhHHHHHHHHHhhhchhhhhhcCCCCccccCCCChhh------h--h--------------------ccC-C-----
Q psy47 797 NPCYAYYQYYTYANLTVLNQSTGRRSRRETNLQPGAYKAD------A--L--------------------TSK-F----- 842 (1001)
Q Consensus 797 nPp~~y~~~y~~ANi~~LN~~Rr~~GL~t~~lt~HaGEaG------~--l--------------------Lr~-~----- 842 (1001)
+|....-..|..| +++|+. +-.|+.|.+ + + +.. +
T Consensus 159 ~~~e~l~~~~~lA---------~~~g~~---Id~Hlde~~~~~~~~le~l~~~~~~~Gl~grV~~sH~~~L~~~~~~~~~ 226 (329)
T PRK06886 159 RGLEAMDILLDTA---------KSLGKM---VHVHVDQFNTPKEKETEQLCDKTIEHGMQGRVVAIHGISIGAHSKEYRY 226 (329)
T ss_pred CCHHHHHHHHHHH---------HHcCCC---eEEeECCCCchhHHHHHHHHHHHHHcCCCCCEEEEEeccccCcChhhHH
Confidence 5666788899999 999999 999999862 0 0 001 1
Q ss_pred cchhhhHhccCceEEEEecCcccccccc---c----cCCChHHHHHCCCcEEEcCCCcc--ccCCCCCChHHHHHHHHHH
Q psy47 843 PNAQDIYDHEITIRIAMSPLSNNSLFLN---Y----HRNPLPEYLARGLVVSLSTDDPL--QFHFTKEPLMEEYSIAAQV 913 (1001)
Q Consensus 843 P~LqyLyy~e~qIpLEvCPlSN~~l~~~---y----~~HPf~~~~~~Gl~VsLsTDDPl--~F~~T~t~L~eEY~iAa~~ 913 (1001)
..++.| +++||.|..||+||..+... + .--|+++|.++|++|+|+||+.. .+-+...++.++...++..
T Consensus 227 ~~i~~L--a~agi~Vv~~P~snl~l~~~~~~~p~~rGv~pv~eL~~aGV~V~lGtDnv~D~~~p~g~~Dmle~~~l~~~~ 304 (329)
T PRK06886 227 RLYQKM--READMMVIACPMAWIDSNRKEDLMPFHNALTPADEMIPEGITVALGTDNICDYMVPLCEGDMWQELSLLAAG 304 (329)
T ss_pred HHHHHH--HHcCCeEEECchhhhhhccccccCcCCCCCCCHHHHHHCCCeEEEecCCCcccCCCCCCCCHHHHHHHHHHH
Confidence 124777 89999999999999754431 1 22489999999999999999975 1223457999999999988
Q ss_pred cCCC-HHHHHHHHH-HHHHHcCC
Q psy47 914 WKLS-SCDMCELAR-NSVLMSGF 934 (1001)
Q Consensus 914 ~~Ls-~~DL~eLAr-NSV~~Sf~ 934 (1001)
.++. ..++.+++- |+.+.-++
T Consensus 305 ~~~~~~~~~l~maT~~gAraLgl 327 (329)
T PRK06886 305 CRFYDLDEMVNIASINGRKVLGL 327 (329)
T ss_pred cCCCCHHHHHHHHhhhHHHHhCC
Confidence 8765 455666554 77666554
No 32
>PRK09356 imidazolonepropionase; Validated
Probab=97.45 E-value=0.00041 Score=79.19 Aligned_cols=124 Identities=15% Similarity=0.005 Sum_probs=89.3
Q ss_pred CCchhHHHHHHHHHhhhchhhhhhcCCCCccccCCCChhh----h--hc-----------cCCc-chhhhHhccCceEEE
Q psy47 797 NPCYAYYQYYTYANLTVLNQSTGRRSRRETNLQPGAYKAD----A--LT-----------SKFP-NAQDIYDHEITIRIA 858 (1001)
Q Consensus 797 nPp~~y~~~y~~ANi~~LN~~Rr~~GL~t~~lt~HaGEaG----~--lL-----------r~~P-~LqyLyy~e~qIpLE 858 (1001)
.++......+..| +++|+. +..||+|.+ + .. ..++ .++.+ ++.++.+.
T Consensus 219 ~~~~~l~~~~~~A---------~~~g~~---v~~H~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~l--a~~g~~~~ 284 (406)
T PRK09356 219 FSVEQSERVLEAA---------KALGLP---VKIHAEQLSNLGGAELAAEYGALSADHLEYLDEAGIAAM--AEAGTVAV 284 (406)
T ss_pred CCHHHHHHHHHHH---------HHCCCC---EEEEEecccCCCHHHHHHHcCCcEehHhhcCCHHHHHHH--HHhCCEEE
Confidence 3456777888888 899999 999998641 1 00 1244 44777 88999999
Q ss_pred EecCccccccccccCCChHHHHHCCCcEEEcCCCccccCCCCCChHHHHHHHHHHcCCCHHHHHHHH-HHHHHHcCCCh
Q psy47 859 MSPLSNNSLFLNYHRNPLPEYLARGLVVSLSTDDPLQFHFTKEPLMEEYSIAAQVWKLSSCDMCELA-RNSVLMSGFPH 936 (1001)
Q Consensus 859 vCPlSN~~l~~~y~~HPf~~~~~~Gl~VsLsTDDPl~F~~T~t~L~eEY~iAa~~~~Ls~~DL~eLA-rNSV~~Sf~~~ 936 (1001)
+||.||..++. ....|++.++++|++|+|+||.+..+.. ...+..++..+....+++..++.+++ .|+.+..+.++
T Consensus 285 ~~P~~~~~l~~-~~~~~~~~l~~~Gi~v~lgtD~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~l~~~T~~~A~~~g~~~ 361 (406)
T PRK09356 285 LLPGAFYFLRE-TQYPPARLLRDAGVPVALATDFNPGSSP-TESLLLAMNMACTLFRLTPEEALAAVTINAARALGRQD 361 (406)
T ss_pred ECccchhhcCc-ccCchHHHHHHCCCeEEEeCCCCCCCCh-hHHHHHHHHHHhhhcCCCHHHHHHHHHHHHHHHhCCCC
Confidence 99999987653 3457999999999999999997431110 13455665555566899999975555 79999888753
No 33
>PRK06687 chlorohydrolase; Validated
Probab=97.39 E-value=0.00054 Score=78.95 Aligned_cols=120 Identities=17% Similarity=0.117 Sum_probs=88.3
Q ss_pred chhHHHHHHHHHhhhchhhhhhcCCCCccccCCCChhh-----h-----------h-----c----------cCCc-chh
Q psy47 799 CYAYYQYYTYANLTVLNQSTGRRSRRETNLQPGAYKAD-----A-----------L-----T----------SKFP-NAQ 846 (1001)
Q Consensus 799 p~~y~~~y~~ANi~~LN~~Rr~~GL~t~~lt~HaGEaG-----~-----------l-----L----------r~~P-~Lq 846 (1001)
+......+..| +++|++ ++.|++|.. + + + ..++ .++
T Consensus 195 ~e~l~~~~~~A---------~~~g~~---i~~H~~e~~~e~~~~~~~~g~~~~~~l~~~g~l~~~~~~~H~~~~~~~~~~ 262 (419)
T PRK06687 195 RDLLEASLEMA---------KELNIP---LHVHVAETKEESGIILKRYGKRPLAFLEELGYLDHPSVFAHGVELNEREIE 262 (419)
T ss_pred HHHHHHHHHHH---------HHcCCc---EEEEeCCCHHHHHHHHHHHCcCHHHHHHHcCCCCCCeEEEEEecCCHHHHH
Confidence 34567788888 899999 999999862 0 0 0 0123 447
Q ss_pred hhHhccCceEEEEecCccccccccccCCChHHHHHCCCcEEEcCCCccccCCCCCChHHHHHHHHHHcC--------CCH
Q psy47 847 DIYDHEITIRIAMSPLSNNSLFLNYHRNPLPEYLARGLVVSLSTDDPLQFHFTKEPLMEEYSIAAQVWK--------LSS 918 (1001)
Q Consensus 847 yLyy~e~qIpLEvCPlSN~~l~~~y~~HPf~~~~~~Gl~VsLsTDDPl~F~~T~t~L~eEY~iAa~~~~--------Ls~ 918 (1001)
.+ ++.++.+..||.||..++.. -.|+++|+++|++|+|+||.+.-.. .-++.+|...++.... ++.
T Consensus 263 ~l--a~~g~~v~~~P~sn~~l~~g--~~p~~~~~~~Gv~v~lGtD~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (419)
T PRK06687 263 RL--ASSQVAIAHNPISNLKLASG--IAPIIQLQKAGVAVGIATDSVASNN--NLDMFEEGRTAALLQKMKSGDASQFPI 336 (419)
T ss_pred HH--HHcCCeEEECcHHhhhhccC--CCcHHHHHHCCCeEEEeCCCCCCCC--ChhHHHHHHHHHHHhccccCCCccCCH
Confidence 77 88999999999999987653 3699999999999999999864222 2467788777655432 788
Q ss_pred HHHHHHH-HHHHHHcCCCh
Q psy47 919 CDMCELA-RNSVLMSGFPH 936 (1001)
Q Consensus 919 ~DL~eLA-rNSV~~Sf~~~ 936 (1001)
.++.++| .|+..+.++++
T Consensus 337 ~~~l~~aT~~gA~~lg~~~ 355 (419)
T PRK06687 337 ETALKVLTIEGAKALGMEN 355 (419)
T ss_pred HHHHHHHhHHHHHHcCCCC
Confidence 8887777 48888777653
No 34
>cd01312 Met_dep_hydrolase_D Metallo-dependent hydrolases, subgroup D is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site. The vast majority of the members have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. The function of this subgroup is unknown.
Probab=97.34 E-value=0.00058 Score=78.34 Aligned_cols=85 Identities=21% Similarity=0.180 Sum_probs=66.5
Q ss_pred chhhhHhccCceEEEEecCccccccccccCCChHHHHHCCCcEEEcCCCccccCCCCCChHHHHHHHHHHcC-----CCH
Q psy47 844 NAQDIYDHEITIRIAMSPLSNNSLFLNYHRNPLPEYLARGLVVSLSTDDPLQFHFTKEPLMEEYSIAAQVWK-----LSS 918 (1001)
Q Consensus 844 ~LqyLyy~e~qIpLEvCPlSN~~l~~~y~~HPf~~~~~~Gl~VsLsTDDPl~F~~T~t~L~eEY~iAa~~~~-----Ls~ 918 (1001)
.++.+ +++++.+..||.||..++.. ..|+++|+++|++|+|+||.+.-++ ...+.+|+..++.... ++.
T Consensus 245 ~~~~l--~~~g~~v~~~P~sn~~lg~g--~~p~~~~~~~Gv~v~lGtD~~~~~~--~~d~~~~~~~~~~~~~~~~~~~~~ 318 (381)
T cd01312 245 EAEIL--ASRGASIALCPRSNRLLNGG--KLDVSELKKAGIPVSLGTDGLSSNI--SLSLLDELRALLDLHPEEDLLELA 318 (381)
T ss_pred HHHHH--HHcCCeEEECcchhhhhcCC--CcCHHHHHHCCCcEEEeCCCCccCC--CCCHHHHHHHHHHhcccccccCCH
Confidence 45788 88999999999999877653 3799999999999999999876443 2488999999887654 455
Q ss_pred HHHHHHH-HHHHHHcCC
Q psy47 919 CDMCELA-RNSVLMSGF 934 (1001)
Q Consensus 919 ~DL~eLA-rNSV~~Sf~ 934 (1001)
.++.+++ .|+.++-+.
T Consensus 319 ~~~l~~aT~~gA~alg~ 335 (381)
T cd01312 319 SELLLMATLGGARALGL 335 (381)
T ss_pred HHHHHHHHHHHHHHhCC
Confidence 5665544 577777664
No 35
>cd01298 ATZ_TRZ_like TRZ/ATZ family contains enzymes from the atrazine degradation pathway and related hydrolases. Atrazine, a chlorinated herbizide, can be catabolized by a variety of different bacteria. The first three steps of the atrazine dehalogenation pathway are catalyzed by atrazine chlorohydrolase (AtzA), hydroxyatrazine ethylaminohydrolase (AtzB), and N-isopropylammelide N-isopropylaminohydrolase (AtzC). All three enzymes belong to the superfamily of metal dependent hydrolases. AtzA and AtzB, beside other related enzymes are represented in this CD.
Probab=97.28 E-value=0.00092 Score=75.58 Aligned_cols=120 Identities=22% Similarity=0.189 Sum_probs=89.6
Q ss_pred CchhHHHHHHHHHhhhchhhhhhcCCCCccccCCCChhh-h---------------h-----c--c--------CCcc-h
Q psy47 798 PCYAYYQYYTYANLTVLNQSTGRRSRRETNLQPGAYKAD-A---------------L-----T--S--------KFPN-A 845 (1001)
Q Consensus 798 Pp~~y~~~y~~ANi~~LN~~Rr~~GL~t~~lt~HaGEaG-~---------------l-----L--r--------~~P~-L 845 (1001)
++..+...+..| +++|+. ++.||+|.+ . + + + .++. +
T Consensus 192 ~~~~l~~~~~~A---------~~~g~~---v~~H~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~H~~~l~~~~~ 259 (411)
T cd01298 192 SDELLREVAELA---------REYGVP---LHIHLAETEDEVEESLEKYGKRPVEYLEELGLLGPDVVLAHCVWLTDEEI 259 (411)
T ss_pred CHHHHHHHHHHH---------HHcCCc---EEEEecCCHHHHHHHHHHhCCCHHHHHHHcCCCCCCeEEEEecCCCHHHH
Confidence 456788888888 899999 999997752 0 0 0 0 1333 3
Q ss_pred hhhHhccCceEEEEecCccccccccccCCChHHHHHCCCcEEEcCCCccccCCCCCChHHHHHHHHHH--------cCCC
Q psy47 846 QDIYDHEITIRIAMSPLSNNSLFLNYHRNPLPEYLARGLVVSLSTDDPLQFHFTKEPLMEEYSIAAQV--------WKLS 917 (1001)
Q Consensus 846 qyLyy~e~qIpLEvCPlSN~~l~~~y~~HPf~~~~~~Gl~VsLsTDDPl~F~~T~t~L~eEY~iAa~~--------~~Ls 917 (1001)
+.+ ++.+|.+++||.+|..++. ...|++.+++.|++++++||.|...+ ..++.+|+..+... .+++
T Consensus 260 ~~l--~~~gi~~~~~p~~~~~~~~--~~~~~~~~~~~Gv~~~~GsD~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (411)
T cd01298 260 ELL--AETGTGVAHNPASNMKLAS--GIAPVPEMLEAGVNVGLGTDGAASNN--NLDMFEEMRLAALLQKLAHGDPTALP 333 (411)
T ss_pred HHH--HHcCCeEEEChHHhhhhhh--CCCCHHHHHHCCCcEEEeCCCCccCC--CcCHHHHHHHHHHHhccccCCCCcCC
Confidence 667 8899999999999986653 34699999999999999999986432 24677787766543 2588
Q ss_pred HHHHHHHH-HHHHHHcCCC
Q psy47 918 SCDMCELA-RNSVLMSGFP 935 (1001)
Q Consensus 918 ~~DL~eLA-rNSV~~Sf~~ 935 (1001)
..++.+++ .|+....+.+
T Consensus 334 ~~~al~~~T~~~A~~lg~~ 352 (411)
T cd01298 334 AEEALEMATIGGAKALGLD 352 (411)
T ss_pred HHHHHHHHHhhHHHHhCCc
Confidence 88887777 4888887765
No 36
>cd01303 GDEase Guanine deaminase (GDEase). Guanine deaminase is an aminohydrolase responsible for the conversion of guanine to xanthine and ammonia, the first step to utilize guanine as a nitrogen source. This reaction also removes the guanine base from the pool and therefore can play a role in the regulation of cellular GTP and the guanylate nucleotide pool.
Probab=97.13 E-value=0.002 Score=74.91 Aligned_cols=119 Identities=19% Similarity=0.055 Sum_probs=88.0
Q ss_pred chhHHHHHHHHHhhhchhhhhhcC-CCCccccCCCChhh------------------------hh-----c----cCCc-
Q psy47 799 CYAYYQYYTYANLTVLNQSTGRRS-RRETNLQPGAYKAD------------------------AL-----T----SKFP- 843 (1001)
Q Consensus 799 p~~y~~~y~~ANi~~LN~~Rr~~G-L~t~~lt~HaGEaG------------------------~l-----L----r~~P- 843 (1001)
+.........| +++| +. +..|+.|.. ++ + ..++
T Consensus 207 ~e~l~~~~~~A---------~~~g~~~---v~~H~~e~~~e~~~~~~~~g~~~~p~~~l~~~G~l~~~~~l~H~~~l~~~ 274 (429)
T cd01303 207 EELLAALGKLA---------KEHPDLH---IQTHISENLDEIAWVKELFPGARDYLDVYDKYGLLTEKTVLAHCVHLSEE 274 (429)
T ss_pred HHHHHHHHHHH---------HHCCCCe---EEEeeCCCHHHHHHHHHHcCCCCCHHHHHHHCCCCCCCcEEEeCCCCCHH
Confidence 45566677777 8888 98 999998741 00 0 0133
Q ss_pred chhhhHhccCceEEEEecCccccccccccCCChHHHHHCCCcEEEcCCCccccCCCCCChHHHHHHHHHHc---------
Q psy47 844 NAQDIYDHEITIRIAMSPLSNNSLFLNYHRNPLPEYLARGLVVSLSTDDPLQFHFTKEPLMEEYSIAAQVW--------- 914 (1001)
Q Consensus 844 ~LqyLyy~e~qIpLEvCPlSN~~l~~~y~~HPf~~~~~~Gl~VsLsTDDPl~F~~T~t~L~eEY~iAa~~~--------- 914 (1001)
.++.+ ++.++.+..||+||..++.. --|++++.++|++|+|+||.+.... .++.+|...++...
T Consensus 275 ~~~~l--~~~g~~v~~~P~sn~~l~~g--~~~~~~~~~~Gv~v~lGtD~~~~~~---~d~~~~~~~~~~~~~~~~~~~~~ 347 (429)
T cd01303 275 EFNLL--KERGASVAHCPTSNLFLGSG--LFDVRKLLDAGIKVGLGTDVGGGTS---FSMLDTLRQAYKVSRLLGYELGG 347 (429)
T ss_pred HHHHH--HHcCCEEEECccchhhhccC--CCCHHHHHHCCCeEEEeccCCCCCC---ccHHHHHHHHHHHHHhhccccCC
Confidence 44677 88999999999999877653 3599999999999999999875444 57888887766532
Q ss_pred --CCCHHHHHHHH-HHHHHHcCCCh
Q psy47 915 --KLSSCDMCELA-RNSVLMSGFPH 936 (1001)
Q Consensus 915 --~Ls~~DL~eLA-rNSV~~Sf~~~ 936 (1001)
+++..++.+++ .|+.++.++++
T Consensus 348 ~~~~~~~~al~~aT~~gA~~lg~~~ 372 (429)
T cd01303 348 HAKLSPAEAFYLATLGGAEALGLDD 372 (429)
T ss_pred cCCCCHHHHHHHHhhHHHHHcCCCC
Confidence 35777877765 68988888754
No 37
>TIGR02967 guan_deamin guanine deaminase. This model describes guanine deaminase, which hydrolyzes guanine to xanthine and ammonia. Xanthine can then be converted to urate by xanthine dehydrogenase, and urate subsequently degraded. In some bacteria, the guanine deaminase gene is found near the xdhABC genes for xanthine dehydrogenase. Non-homologous forms of guanine deaminase also exist, as well as distantly related forms outside the scope of this model.
Probab=97.07 E-value=0.002 Score=73.76 Aligned_cols=120 Identities=20% Similarity=0.047 Sum_probs=87.8
Q ss_pred CchhHHHHHHHHHhhhchhhhhhc-CCCCccccCCCChhh-----h-------------------h-----cc----CCc
Q psy47 798 PCYAYYQYYTYANLTVLNQSTGRR-SRRETNLQPGAYKAD-----A-------------------L-----TS----KFP 843 (1001)
Q Consensus 798 Pp~~y~~~y~~ANi~~LN~~Rr~~-GL~t~~lt~HaGEaG-----~-------------------l-----Lr----~~P 843 (1001)
++.........| +++ |+. +..|++|.. + + +. .++
T Consensus 184 s~e~l~~~~~~A---------~~~~g~~---v~~H~~e~~~~~~~~~~~~~~~~~~~~~l~~~g~lg~~~~~~H~~~~~~ 251 (401)
T TIGR02967 184 SPEQLAAAGELA---------KEYPDVY---VQTHLSENKDEIAWVKELFPEAKDYLDVYDHYGLLGRRSVFAHCIHLSD 251 (401)
T ss_pred cHHHHHHHHHHH---------HhCCCCe---eEEEECCCchHHHHHHHHcCCCCcHHHHHHHCCCCCCCeEEEecccCCH
Confidence 345566666777 887 999 999998752 0 0 00 122
Q ss_pred -chhhhHhccCceEEEEecCccccccccccCCChHHHHHCCCcEEEcCCCccccCCCCCChHHHHHHHHHH-----cCCC
Q psy47 844 -NAQDIYDHEITIRIAMSPLSNNSLFLNYHRNPLPEYLARGLVVSLSTDDPLQFHFTKEPLMEEYSIAAQV-----WKLS 917 (1001)
Q Consensus 844 -~LqyLyy~e~qIpLEvCPlSN~~l~~~y~~HPf~~~~~~Gl~VsLsTDDPl~F~~T~t~L~eEY~iAa~~-----~~Ls 917 (1001)
.++.+ +++|+.+..||+||..++. ..-|++.++++|++|+|+||.+.... -++.++...+... .+++
T Consensus 252 ~~~~~l--~~~g~~v~~~P~~~~~~~~--g~~~~~~~~~~Gv~v~lGtD~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 324 (401)
T TIGR02967 252 EECQRL--AETGAAIAHCPTSNLFLGS--GLFNLKKALEHGVRVGLGTDVGGGTS---FSMLQTLREAYKVSQLQGARLS 324 (401)
T ss_pred HHHHHH--HHcCCeEEEChHHHHHhcc--CCCCHHHHHHCCCeEEEecCCCCCCC---cCHHHHHHHHHHHhhhcCCCCC
Confidence 45677 8899999999999987664 34699999999999999999864322 4688888776654 4688
Q ss_pred HHHHHHHH-HHHHHHcCCCh
Q psy47 918 SCDMCELA-RNSVLMSGFPH 936 (1001)
Q Consensus 918 ~~DL~eLA-rNSV~~Sf~~~ 936 (1001)
..++.+++ .|+.++-+.++
T Consensus 325 ~~~~l~~aT~~~A~~lg~~~ 344 (401)
T TIGR02967 325 PFEAFYLATLGGARALDLDD 344 (401)
T ss_pred HHHHHHHHHHHHHHHhCCcC
Confidence 88888876 58888777653
No 38
>PRK09228 guanine deaminase; Provisional
Probab=96.98 E-value=0.0038 Score=72.81 Aligned_cols=120 Identities=20% Similarity=0.063 Sum_probs=88.4
Q ss_pred CchhHHHHHHHHHhhhchhhhhhc-CCCCccccCCCChhh-----h----------h--------c----------cCCc
Q psy47 798 PCYAYYQYYTYANLTVLNQSTGRR-SRRETNLQPGAYKAD-----A----------L--------T----------SKFP 843 (1001)
Q Consensus 798 Pp~~y~~~y~~ANi~~LN~~Rr~~-GL~t~~lt~HaGEaG-----~----------l--------L----------r~~P 843 (1001)
++..+......| +++ |+. +..|++|.. + + + ..++
T Consensus 209 s~~~l~~~~~lA---------~~~~~~~---i~~Hl~E~~~e~~~~~~~~g~~~~~~~~l~~~G~l~~~~~~~H~~~l~~ 276 (433)
T PRK09228 209 TPEQLEAAGALA---------REHPDVW---IQTHLSENLDEIAWVKELFPEARDYLDVYERYGLLGPRAVFAHCIHLED 276 (433)
T ss_pred CHHHHHHHHHHH---------HHCCCCc---eEEeecCChhHHHHHHHHcCCCCCHHHHHHHcCCCCCCeEEEeccCCCH
Confidence 345666677777 786 998 999999861 0 0 1 0133
Q ss_pred -chhhhHhccCceEEEEecCccccccccccCCChHHHHHCCCcEEEcCCCccccCCCCCChHHHHHHHHHH-----cCCC
Q psy47 844 -NAQDIYDHEITIRIAMSPLSNNSLFLNYHRNPLPEYLARGLVVSLSTDDPLQFHFTKEPLMEEYSIAAQV-----WKLS 917 (1001)
Q Consensus 844 -~LqyLyy~e~qIpLEvCPlSN~~l~~~y~~HPf~~~~~~Gl~VsLsTDDPl~F~~T~t~L~eEY~iAa~~-----~~Ls 917 (1001)
.++.| ++.++.+.+||.||..++.. -.|+..+.++|++|+|+||-+.... -++.++...++.. .+++
T Consensus 277 ~~~~~l--a~~g~~v~~~P~sn~~lg~g--~~~~~~~~~~Gv~v~lGtD~~~~~~---~d~~~~~~~~~~~~~~~~~~~~ 349 (433)
T PRK09228 277 RERRRL--AETGAAIAFCPTSNLFLGSG--LFDLKRADAAGVRVGLGTDVGGGTS---FSMLQTMNEAYKVQQLQGYRLS 349 (433)
T ss_pred HHHHHH--HHcCCeEEECCccHHhhcCC--CcCHHHHHHCCCeEEEecCCCCCCC---CCHHHHHHHHHHHhhcccCCCC
Confidence 34677 88999999999999877653 4699999999999999999764223 4678887777654 4678
Q ss_pred HHHHHHHH-HHHHHHcCCCh
Q psy47 918 SCDMCELA-RNSVLMSGFPH 936 (1001)
Q Consensus 918 ~~DL~eLA-rNSV~~Sf~~~ 936 (1001)
..++.+++ .|+.+.-++++
T Consensus 350 ~~~~l~~aT~~~A~~lg~~~ 369 (433)
T PRK09228 350 PFQAFYLATLGGARALGLDD 369 (433)
T ss_pred HHHHHHHHhHHHHHHhCCCC
Confidence 88887776 58888877653
No 39
>PRK09045 N-ethylammeline chlorohydrolase; Provisional
Probab=96.98 E-value=0.0026 Score=73.99 Aligned_cols=120 Identities=19% Similarity=0.118 Sum_probs=88.1
Q ss_pred chhHHHHHHHHHhhhchhhhhhcCCCCccccCCCChhh-----hh----------------c--c--------CCc-chh
Q psy47 799 CYAYYQYYTYANLTVLNQSTGRRSRRETNLQPGAYKAD-----AL----------------T--S--------KFP-NAQ 846 (1001)
Q Consensus 799 p~~y~~~y~~ANi~~LN~~Rr~~GL~t~~lt~HaGEaG-----~l----------------L--r--------~~P-~Lq 846 (1001)
+.....++..| +++|+. +..|++|.. ++ + + .++ .++
T Consensus 201 ~~~l~~~~~~A---------~~~g~~---v~~H~~e~~~~~~~~~~~~g~~~~~~l~~~g~l~~r~~~~H~~~l~~~~~~ 268 (443)
T PRK09045 201 DENLERIRTLA---------EQLDLP---IHIHLHETAQEIADSLKQHGQRPLARLARLGLLGPRLIAVHMTQLTDAEIA 268 (443)
T ss_pred HHHHHHHHHHH---------HHcCCC---EEEeecCcHHHHHHHHHHhCCCHHHHHHHcCCCCCCeEEEEecCCCHHHHH
Confidence 46778888888 899999 999998752 00 0 0 123 346
Q ss_pred hhHhccCceEEEEecCccccccccccCCChHHHHHCCCcEEEcCCCccccCCCCCChHHHHHHHHHH--------cCCCH
Q psy47 847 DIYDHEITIRIAMSPLSNNSLFLNYHRNPLPEYLARGLVVSLSTDDPLQFHFTKEPLMEEYSIAAQV--------WKLSS 918 (1001)
Q Consensus 847 yLyy~e~qIpLEvCPlSN~~l~~~y~~HPf~~~~~~Gl~VsLsTDDPl~F~~T~t~L~eEY~iAa~~--------~~Ls~ 918 (1001)
.+ ++.++.+.+||.||..++. .-.|++.+++.|++|+|+||.+..++ ...+.+|...++.. .+++.
T Consensus 269 ~l--a~~g~~i~~~P~~~~~~~~--~~~~~~~l~~~Gv~v~lGtD~~~~~~--~~~~~~~~~~a~~~~~~~~~~~~~~~~ 342 (443)
T PRK09045 269 LL--AETGCSVVHCPESNLKLAS--GFCPVAKLLQAGVNVALGTDGAASNN--DLDLFGEMRTAALLAKAVAGDATALPA 342 (443)
T ss_pred HH--HHcCCeEEECHHHHhhhcc--CCCcHHHHHHCCCeEEEecCCCCCCC--CccHHHHHHHHHHHHhhccCCCCcCCH
Confidence 77 8899999999999975543 34799999999999999999886433 24567777766432 24788
Q ss_pred HHHHHHH-HHHHHHcCCCh
Q psy47 919 CDMCELA-RNSVLMSGFPH 936 (1001)
Q Consensus 919 ~DL~eLA-rNSV~~Sf~~~ 936 (1001)
.++.+++ .|+....+.++
T Consensus 343 ~~al~~~T~~~A~~lg~~~ 361 (443)
T PRK09045 343 HTALRMATLNGARALGLDD 361 (443)
T ss_pred HHHHHHHhHHHHHHcCCCC
Confidence 8887777 58888877653
No 40
>PRK12393 amidohydrolase; Provisional
Probab=96.96 E-value=0.0033 Score=73.78 Aligned_cols=121 Identities=18% Similarity=0.091 Sum_probs=88.3
Q ss_pred CCchhHHHHHHHHHhhhchhhhhhcCCCCccccCCCChh-----------h-----------hh-----c----cCCc-c
Q psy47 797 NPCYAYYQYYTYANLTVLNQSTGRRSRRETNLQPGAYKA-----------D-----------AL-----T----SKFP-N 844 (1001)
Q Consensus 797 nPp~~y~~~y~~ANi~~LN~~Rr~~GL~t~~lt~HaGEa-----------G-----------~l-----L----r~~P-~ 844 (1001)
.++..+...+..| +++|+. +..|++|. | ++ + ..++ .
T Consensus 215 ~~~e~l~~~~~~a---------~~~g~~---~~~H~~e~~~~~~~~~~~~g~~~~~~l~~~g~l~~~~~~~H~~~l~~~d 282 (457)
T PRK12393 215 LPPELLREVARAA---------RGMGLR---LHSHLSETVDYVDFCREKYGMTPVQFVAEHDWLGPDVWFAHLVKLDAEE 282 (457)
T ss_pred cCHHHHHHHHHHH---------HHcCCe---EEEEeCCCHHHHHHHHHHhCCCHHHHHHHcCCCCCCeEEEEEecCCHHH
Confidence 3456777888888 889999 99999986 1 01 0 1134 4
Q ss_pred hhhhHhccCceEEEEecCccccccccccCCChHHHHHCCCcEEEcCCCccccCCCCCChHHHHHHHHHHcC-------CC
Q psy47 845 AQDIYDHEITIRIAMSPLSNNSLFLNYHRNPLPEYLARGLVVSLSTDDPLQFHFTKEPLMEEYSIAAQVWK-------LS 917 (1001)
Q Consensus 845 LqyLyy~e~qIpLEvCPlSN~~l~~~y~~HPf~~~~~~Gl~VsLsTDDPl~F~~T~t~L~eEY~iAa~~~~-------Ls 917 (1001)
++.+ ++.++.+..||.||..++.. -.|+++|+++|++|+|+||.+.-.+ ..++.+|...+..... ++
T Consensus 283 ~~~l--a~~g~~v~~~P~sn~~lg~g--~~~~~~~~~~Gv~v~lGtD~~~~~~--~~d~~~~~~~a~~~~~~~~~~~~~~ 356 (457)
T PRK12393 283 IALL--AQTGTGIAHCPQSNGRLGSG--IAPALAMEAAGVPVSLGVDGAASNE--SADMLSEAHAAWLLHRAEGGADATT 356 (457)
T ss_pred HHHH--HHcCCeEEECchhhhhhccc--CCCHHHHHHCCCeEEEecCCcccCC--CccHHHHHHHHHHHhhhcCCCCCCC
Confidence 4777 88999999999999887753 4799999999999999999876322 2467788776654332 67
Q ss_pred HHHHHHHH-HHHHHHcCCC
Q psy47 918 SCDMCELA-RNSVLMSGFP 935 (1001)
Q Consensus 918 ~~DL~eLA-rNSV~~Sf~~ 935 (1001)
..++.+++ .|+....+.+
T Consensus 357 ~~~~l~~~T~~~A~~l~~~ 375 (457)
T PRK12393 357 VEDVVHWGTAGGARVLGLD 375 (457)
T ss_pred HHHHHHHHhHHHHHHhCCC
Confidence 77766555 4677777664
No 41
>PRK15493 5-methylthioadenosine/S-adenosylhomocysteine deaminase; Provisional
Probab=96.95 E-value=0.0027 Score=73.99 Aligned_cols=119 Identities=18% Similarity=0.121 Sum_probs=86.6
Q ss_pred chhHHHHHHHHHhhhchhhhhhcCCCCccccCCCChh-----------h-----------hh-----c----cCCc-chh
Q psy47 799 CYAYYQYYTYANLTVLNQSTGRRSRRETNLQPGAYKA-----------D-----------AL-----T----SKFP-NAQ 846 (1001)
Q Consensus 799 p~~y~~~y~~ANi~~LN~~Rr~~GL~t~~lt~HaGEa-----------G-----------~l-----L----r~~P-~Lq 846 (1001)
+.........| +++|+. +..|++|. | ++ + ..++ .++
T Consensus 196 ~e~l~~~~~~A---------~~~g~~---v~~H~~e~~~e~~~~~~~~g~~~~~~l~~~Gll~~~~~~~H~~~l~~~d~~ 263 (435)
T PRK15493 196 TELLEECARIA---------VENQTM---VHIHLSETEREVRDIEAQYGKRPVEYAASCGLFKRPTVIAHGVVLNDNERA 263 (435)
T ss_pred HHHHHHHHHHH---------HHcCCc---EEEEeCCCHHHHHHHHHHhCCCHHHHHHHcCCCCCCcEEEEeecCCHHHHH
Confidence 44566677777 888998 99999885 1 11 0 0123 456
Q ss_pred hhHhccCceEEEEecCccccccccccCCChHHHHHCCCcEEEcCCCccccCCCCCChHHHHHHHHHH--------cCCCH
Q psy47 847 DIYDHEITIRIAMSPLSNNSLFLNYHRNPLPEYLARGLVVSLSTDDPLQFHFTKEPLMEEYSIAAQV--------WKLSS 918 (1001)
Q Consensus 847 yLyy~e~qIpLEvCPlSN~~l~~~y~~HPf~~~~~~Gl~VsLsTDDPl~F~~T~t~L~eEY~iAa~~--------~~Ls~ 918 (1001)
.| .+.++.+..||.||..++..+ -|++.|+++|++|+|+||.+.-. ...++.+|...+... ..++.
T Consensus 264 ~l--a~~g~~v~~~P~sn~~l~~g~--~p~~~~~~~Gv~v~lGtD~~~~~--~~~d~~~~~~~a~~~~~~~~~~~~~~~~ 337 (435)
T PRK15493 264 FL--AEHDVRVAHNPNSNLKLGSGI--ANVKAMLEAGIKVGIATDSVASN--NNLDMFEEMRIATLLQKGIHQDATALPV 337 (435)
T ss_pred HH--HHcCCeEEEChHHHHHHhcCc--ccHHHHHHCCCeEEEccCccccC--CCcCHHHHHHHHHHHHhhccCCCCcCCH
Confidence 77 889999999999998776543 59999999999999999985421 124678888765543 25788
Q ss_pred HHHHHHH-HHHHHHcCCC
Q psy47 919 CDMCELA-RNSVLMSGFP 935 (1001)
Q Consensus 919 ~DL~eLA-rNSV~~Sf~~ 935 (1001)
.++.+++ .|+....+++
T Consensus 338 ~~~l~~aT~~gA~~lg~~ 355 (435)
T PRK15493 338 ETALTLATKGAAEVIGMK 355 (435)
T ss_pred HHHHHHHhHHHHHHcCCC
Confidence 8887775 6777777764
No 42
>PRK14085 imidazolonepropionase; Provisional
Probab=96.93 E-value=0.0026 Score=72.59 Aligned_cols=120 Identities=10% Similarity=-0.011 Sum_probs=84.2
Q ss_pred chhHHHHHHHHHhhhchhhhhhcCCCCccccCCCChhh----h--hc-----------cCCc-chhhhHhccCceEEEEe
Q psy47 799 CYAYYQYYTYANLTVLNQSTGRRSRRETNLQPGAYKAD----A--LT-----------SKFP-NAQDIYDHEITIRIAMS 860 (1001)
Q Consensus 799 p~~y~~~y~~ANi~~LN~~Rr~~GL~t~~lt~HaGEaG----~--lL-----------r~~P-~LqyLyy~e~qIpLEvC 860 (1001)
+......+..| +++|+. ++.||++.| + ++ ..++ .++.+ ++.++.+.+|
T Consensus 206 ~~~l~~~~~~a---------~~~g~~---v~~H~~~~~~~~~v~~~~~~g~~~i~H~~~l~~~~~~~l--a~~gv~~~~~ 271 (382)
T PRK14085 206 EDQSRRVLTAG---------RAAGLG---LRVHGNQLGPGPGVRLAVELGAASVDHCTYLTDADVDAL--AGSGTVATLL 271 (382)
T ss_pred HHHHHHHHHHH---------HHcCCC---eEEEeCcccCChHHHHHHHcCCCcHHHhCCCCHHHHHHH--HHcCCEEEEC
Confidence 45666777888 899999 999998743 1 00 1133 34777 8899999999
Q ss_pred cCccccccccccCCChHHHHHCCCcEEEcCCCccccCCCCCChHHHHHHHHHHcCCCHHHHHHHH-HHHHHHcCCC
Q psy47 861 PLSNNSLFLNYHRNPLPEYLARGLVVSLSTDDPLQFHFTKEPLMEEYSIAAQVWKLSSCDMCELA-RNSVLMSGFP 935 (1001)
Q Consensus 861 PlSN~~l~~~y~~HPf~~~~~~Gl~VsLsTDDPl~F~~T~t~L~eEY~iAa~~~~Ls~~DL~eLA-rNSV~~Sf~~ 935 (1001)
|.+|..++..+ -|++.++++|++|+|+||.+....+ ...+..+...+....+++..+..+++ .|+....+.+
T Consensus 272 P~~~~~~~~~~--~~~~~l~~aGv~v~lgsD~~~~~~~-~~~~~~~~~~~~~~~~l~~~~al~~aT~~~A~~lg~~ 344 (382)
T PRK14085 272 PGAEFSTRQPY--PDARRLLDAGVTVALASDCNPGSSY-TSSMPFCVALAVRQMGMTPAEAVWAATAGGARALRRD 344 (382)
T ss_pred cHHHHhcCCCC--chHHHHHHCCCcEEEEeCCCCCCCh-HHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHcCCC
Confidence 99998665433 5899999999999999998521110 02344444455556789999987655 5777777764
No 43
>TIGR03314 Se_ssnA putative selenium metabolism protein SsnA. Members of this protein family are found exclusively in genomes that contain putative set of labile selenium-dependent enzyme accessory proteins as well as homologs of a labile selenium-dependent purine hydroxylase. A mutant in this gene in Escherichia coli had improved stationary phase viability. The function is unknown.
Probab=96.88 E-value=0.0014 Score=76.47 Aligned_cols=95 Identities=16% Similarity=0.110 Sum_probs=72.6
Q ss_pred chhHHHHHHHHHhhhchhhhhhcCCCCccccCCCChhh----------------------hh-----c----cCC-cchh
Q psy47 799 CYAYYQYYTYANLTVLNQSTGRRSRRETNLQPGAYKAD----------------------AL-----T----SKF-PNAQ 846 (1001)
Q Consensus 799 p~~y~~~y~~ANi~~LN~~Rr~~GL~t~~lt~HaGEaG----------------------~l-----L----r~~-P~Lq 846 (1001)
+.........| +++|+. +..|++|.. ++ + ..+ .+++
T Consensus 203 ~~~l~~~~~lA---------~~~~~~---i~~H~~E~~~e~~~~~~~~g~~~~~~l~~~G~l~~~~~~~H~~~~~~~d~~ 270 (441)
T TIGR03314 203 DAGLEMCREAV---------QATGRG---FHIHVAEDIYDVEDSHHKYGKDIVERLADFGLLGSKTLAAHCIYLSDREIE 270 (441)
T ss_pred HHHHHHHHHHH---------HHcCCC---EEEEcCCCHHHHHHHHHHcCCCHHHHHHHCCCCCCCeEEEEEecCCHHHHH
Confidence 34555566666 888998 999999961 11 0 113 3557
Q ss_pred hhHhccCceEEEEecCccccccccccCCChHHHHHCCCcEEEcCCCccccCCCCCChHHHHHHHHHHcC
Q psy47 847 DIYDHEITIRIAMSPLSNNSLFLNYHRNPLPEYLARGLVVSLSTDDPLQFHFTKEPLMEEYSIAAQVWK 915 (1001)
Q Consensus 847 yLyy~e~qIpLEvCPlSN~~l~~~y~~HPf~~~~~~Gl~VsLsTDDPl~F~~T~t~L~eEY~iAa~~~~ 915 (1001)
.| .++|+.+..||.||..++.. --|+++|+++|++|+|+||.. . .++.+|...|+...+
T Consensus 271 ~l--a~~g~~v~~cP~sn~~l~~G--~~p~~~~~~~Gv~v~LGtD~~---~---~d~~~em~~a~~~~~ 329 (441)
T TIGR03314 271 LL--NETDTFVVHNPESNMGNAVG--YNPVLRMFKNGILLGLGTDGY---T---SDMFESLKFANFKHK 329 (441)
T ss_pred HH--HHcCCcEEECHHHHhhhccC--CCCHHHHHHCCCEEEEcCCCC---C---cCHHHHHHHHHHHhc
Confidence 78 88999999999999987754 369999999999999999963 2 589999998876543
No 44
>cd01313 Met_dep_hydrolase_E Metallo-dependent hydrolases, subgroup D is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site. The vast majority of the members have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. The function of this subgroup is unknown.
Probab=96.85 E-value=0.0051 Score=71.30 Aligned_cols=116 Identities=13% Similarity=0.060 Sum_probs=84.2
Q ss_pred CchhHHHHHHHHHhhhchhhhhhcCCCCccccCCCChhh-----------h----------hc----------cCCc-ch
Q psy47 798 PCYAYYQYYTYANLTVLNQSTGRRSRRETNLQPGAYKAD-----------A----------LT----------SKFP-NA 845 (1001)
Q Consensus 798 Pp~~y~~~y~~ANi~~LN~~Rr~~GL~t~~lt~HaGEaG-----------~----------lL----------r~~P-~L 845 (1001)
++......+..| ++ |+. +..|++|.. . ++ ..++ .+
T Consensus 205 s~e~l~~~~~~a---------~~-g~~---i~~H~~e~~~e~~~~~~~~g~~~i~~l~~~g~l~~~~~~~H~~~l~~~~~ 271 (418)
T cd01313 205 PAEQLAALAALA---------SE-KAP---VHIHLAEQPKEVDDCLAAHGRRPVELLLDHGHLDARWCLVHATHLTDNET 271 (418)
T ss_pred CHHHHHHHHHHH---------hc-CCc---eEEEeCCCHHHHHHHHHHcCCCHHHHHHHcCCCCCCEEEEeCCCCCHHHH
Confidence 455667777777 77 999 999998841 0 01 0133 45
Q ss_pred hhhHhccCceEEEEecCccccccccccCCChHHHHHCCCcEEEcCCCccccCCCCCChHHHHHHHHHH------------
Q psy47 846 QDIYDHEITIRIAMSPLSNNSLFLNYHRNPLPEYLARGLVVSLSTDDPLQFHFTKEPLMEEYSIAAQV------------ 913 (1001)
Q Consensus 846 qyLyy~e~qIpLEvCPlSN~~l~~~y~~HPf~~~~~~Gl~VsLsTDDPl~F~~T~t~L~eEY~iAa~~------------ 913 (1001)
+.+ ++.++.+.+||.||..++.. --|+++|+++|++|+|+||.+. . .++.++...++..
T Consensus 272 ~~l--a~~g~~v~~~P~sn~~lg~g--~~p~~~l~~~Gv~v~lGtD~~~--~---~d~~~~~~~~~~~~~~~~~~~~~~~ 342 (418)
T cd01313 272 LLL--GRSGAVVGLCPTTEANLGDG--IFPAAALLAAGGRIGIGSDSNA--R---IDLLEELRQLEYSQRLRDRARNVLA 342 (418)
T ss_pred HHH--HHcCCEEEECCCchhhccCC--CCCHHHHHHCCCcEEEecCCCC--C---cCHHHHHHHHHHHHHHHhccccccc
Confidence 777 88999999999999887753 3599999999999999999643 1 3677777766532
Q ss_pred --cCCCHHHHHHHH-HHHHHHcCCC
Q psy47 914 --WKLSSCDMCELA-RNSVLMSGFP 935 (1001)
Q Consensus 914 --~~Ls~~DL~eLA-rNSV~~Sf~~ 935 (1001)
..++..++.+++ .|+-.+-+++
T Consensus 343 ~~~~~~~~~~l~~~T~~gA~alg~~ 367 (418)
T cd01313 343 TAGGSSARALLDAALAGGAQALGLA 367 (418)
T ss_pred ccCCCCHHHHHHHHHHHHHHHhCCC
Confidence 267877776655 5787777754
No 45
>PRK08204 hypothetical protein; Provisional
Probab=96.84 E-value=0.0043 Score=72.04 Aligned_cols=119 Identities=13% Similarity=0.008 Sum_probs=87.2
Q ss_pred chhHHHHHHHHHhhhchhhhhhcCCCCccccCCCChh----h-----------hh-----c----cCCc-chhhhHhccC
Q psy47 799 CYAYYQYYTYANLTVLNQSTGRRSRRETNLQPGAYKA----D-----------AL-----T----SKFP-NAQDIYDHEI 853 (1001)
Q Consensus 799 p~~y~~~y~~ANi~~LN~~Rr~~GL~t~~lt~HaGEa----G-----------~l-----L----r~~P-~LqyLyy~e~ 853 (1001)
+......+..| ++.|+. +..||.|. + ++ + ..++ .++.| ++.
T Consensus 200 ~e~l~~~~~~A---------~~~g~~---v~~H~~e~~~~~~~~~~~~l~~~g~~~~~~~i~H~~~~~~~~~~~l--a~~ 265 (449)
T PRK08204 200 WEVARADFRLA---------RELGLP---ISMHQGFGPWGATPRGVEQLHDAGLLGPDLNLVHGNDLSDDELKLL--ADS 265 (449)
T ss_pred HHHHHHHHHHH---------HHcCCc---EEEEEcCCCcccCCCHHHHHHHCCCCCCCeEEEecCCCCHHHHHHH--HHc
Confidence 34556667777 888998 99999653 1 11 0 1144 44788 889
Q ss_pred ceEEEEecCccccccccccCCChHHHHHCCCcEEEcCCCccccCCCCCChHHHHHHHHHH-------------------c
Q psy47 854 TIRIAMSPLSNNSLFLNYHRNPLPEYLARGLVVSLSTDDPLQFHFTKEPLMEEYSIAAQV-------------------W 914 (1001)
Q Consensus 854 qIpLEvCPlSN~~l~~~y~~HPf~~~~~~Gl~VsLsTDDPl~F~~T~t~L~eEY~iAa~~-------------------~ 914 (1001)
++.+..||.||..++. ...|++.++++|++|+|+||.+.... ..+.++...+... .
T Consensus 266 g~~v~~~P~~~~~~g~--~~~~~~~~~~~Gv~v~lGtD~~~~~~---~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~ 340 (449)
T PRK08204 266 GGSFSVTPEIEMMMGH--GYPVTGRLLAHGVRPSLGVDVVTSTG---GDMFTQMRFALQAERARDNAVHLREGGMPPPRL 340 (449)
T ss_pred CCCEEEChHHHhhhcC--CCCcHHHHHhcCCceeeccccCCCCC---cCHHHHHHHHHHHHHhhcccccccccccCCCcC
Confidence 9999999999977654 34699999999999999999875434 5777887766532 4
Q ss_pred CCCHHHHHHHH-HHHHHHcCCCh
Q psy47 915 KLSSCDMCELA-RNSVLMSGFPH 936 (1001)
Q Consensus 915 ~Ls~~DL~eLA-rNSV~~Sf~~~ 936 (1001)
+++..+...++ .|+....+.++
T Consensus 341 ~~~~~~al~~~T~~gA~~lg~~~ 363 (449)
T PRK08204 341 TLTARQVLEWATIEGARALGLED 363 (449)
T ss_pred CCCHHHHHHHHhHHHHHHcCCCC
Confidence 67877776666 68888888754
No 46
>PRK08393 N-ethylammeline chlorohydrolase; Provisional
Probab=96.83 E-value=0.0044 Score=71.82 Aligned_cols=119 Identities=17% Similarity=0.122 Sum_probs=85.1
Q ss_pred chhHHHHHHHHHhhhchhhhhhcCCCCccccCCCChhh----------------------hh-----c----cCCc-chh
Q psy47 799 CYAYYQYYTYANLTVLNQSTGRRSRRETNLQPGAYKAD----------------------AL-----T----SKFP-NAQ 846 (1001)
Q Consensus 799 p~~y~~~y~~ANi~~LN~~Rr~~GL~t~~lt~HaGEaG----------------------~l-----L----r~~P-~Lq 846 (1001)
+......+..| +++|+. ++.|++|.. ++ + ..++ .++
T Consensus 188 ~~~l~~~~~~A---------~~~g~~---v~~H~~e~~~~~~~~~~~~g~~~~~~l~~~G~l~~~~~~~H~~~l~~~~l~ 255 (424)
T PRK08393 188 LALLKWVREKA---------REWNKL---ITIHLSETMDEIKQIREKYGKSPVVLLDEIGFLNEDVIAAHGVWLSSRDIR 255 (424)
T ss_pred HHHHHHHHHHH---------HHcCCc---EEEEeCCCHHHHHHHHHHhCcCHHHHHHHcCCCCCCcEEEEeecCCHHHHH
Confidence 45666777777 899998 999999862 11 0 1134 347
Q ss_pred hhHhccCceEEEEecCccccccccccCCChHHHHHCCCcEEEcCCCccccCCCCCChHHHHHHHHHH---cC-----CCH
Q psy47 847 DIYDHEITIRIAMSPLSNNSLFLNYHRNPLPEYLARGLVVSLSTDDPLQFHFTKEPLMEEYSIAAQV---WK-----LSS 918 (1001)
Q Consensus 847 yLyy~e~qIpLEvCPlSN~~l~~~y~~HPf~~~~~~Gl~VsLsTDDPl~F~~T~t~L~eEY~iAa~~---~~-----Ls~ 918 (1001)
.+ .++|+.+..||.||..++.. ..|+++++++|++|+|+||++.-.. .-.+.+|...++.. .+ ++.
T Consensus 256 ~l--a~~g~~v~~~P~sn~~lg~g--~~~~~~~~~~Gv~v~lGtD~~~~~~--~~d~~~~~~~a~~~~~~~~~~~~~~~~ 329 (424)
T PRK08393 256 IL--ASAGVTVAHNPASNMKLGSG--VMPLRKLLNAGVNVALGTDGAASNN--NLDMLREMKLAALLHKVHNLDPTIADA 329 (424)
T ss_pred HH--HhcCCEEEECHHHHHhhccC--CCCHHHHHHCCCcEEEecCCCccCC--chhHHHHHHHHHHHHhhccCCCCcCCH
Confidence 77 88999999999999887753 4699999999999999999986332 13788888876522 22 244
Q ss_pred HHHHH-HHHHHHHHcCCC
Q psy47 919 CDMCE-LARNSVLMSGFP 935 (1001)
Q Consensus 919 ~DL~e-LArNSV~~Sf~~ 935 (1001)
.++.+ ...|+-+..+.+
T Consensus 330 ~~al~~aT~~~A~~lg~~ 347 (424)
T PRK08393 330 ETVFRMATQNGAKALGLK 347 (424)
T ss_pred HHHHHHHHHHHHHHhCCC
Confidence 45444 556888877764
No 47
>PRK07203 putative chlorohydrolase/aminohydrolase; Validated
Probab=96.72 E-value=0.0041 Score=72.39 Aligned_cols=114 Identities=17% Similarity=0.165 Sum_probs=81.4
Q ss_pred CchhHHHHHHHHHhhhchhhhhhcCCCCccccCCCChhh----------------h-----hcc----------CCc-ch
Q psy47 798 PCYAYYQYYTYANLTVLNQSTGRRSRRETNLQPGAYKAD----------------A-----LTS----------KFP-NA 845 (1001)
Q Consensus 798 Pp~~y~~~y~~ANi~~LN~~Rr~~GL~t~~lt~HaGEaG----------------~-----lLr----------~~P-~L 845 (1001)
++..+......| ++.|++ +..|++|.. . ++. .++ ++
T Consensus 203 s~~~l~~~~~lA---------~~~g~~---i~~H~~E~~~e~~~~~~~~g~~~v~~l~~~Gll~~~~~~~H~~~~~~~d~ 270 (442)
T PRK07203 203 SDATLEKCREAV---------KETGRG---YHIHVAEGIYDVSDSHKKYGKDIVERLADFGLLGEKTLAAHCIYLSDEEI 270 (442)
T ss_pred CHHHHHHHHHHH---------HHcCCc---EEEEecCChHHHHHHHHHcCCCHHHHHHhCCCCCCCcEEEEeecCCHHHH
Confidence 345666677777 889998 999999972 0 111 123 45
Q ss_pred hhhHhccCceEEEEecCccccccccccCCChHHHHHCCCcEEEcCCCccccCCCCCChHHHHHHHHHHcC-------CCH
Q psy47 846 QDIYDHEITIRIAMSPLSNNSLFLNYHRNPLPEYLARGLVVSLSTDDPLQFHFTKEPLMEEYSIAAQVWK-------LSS 918 (1001)
Q Consensus 846 qyLyy~e~qIpLEvCPlSN~~l~~~y~~HPf~~~~~~Gl~VsLsTDDPl~F~~T~t~L~eEY~iAa~~~~-------Ls~ 918 (1001)
+.| .++|+.+..||.||..++..+ -|+++|+++|++|+|+||.. . .++.+|+..+....+ .+.
T Consensus 271 ~~l--a~~g~~v~~~P~sn~~l~~g~--~p~~~~~~~Gv~v~lGtD~~---~---~d~~~~~~~a~~~~~~~~~~~~~~~ 340 (442)
T PRK07203 271 DLL--KETDTFVVHNPESNMGNAVGY--NPVLEMIKNGILLGLGTDGY---T---SDMFESYKVANFKHKHAGGDPNVGW 340 (442)
T ss_pred HHH--HhcCCeEEECchhhhhcccCC--CCHHHHHHCCCeEEEcCCCC---C---ccHHHHHHHHHHHhccccCCCCCCH
Confidence 777 889999999999998876543 69999999999999999963 2 488889888754332 123
Q ss_pred HHHHHHH-HHHHHHcC
Q psy47 919 CDMCELA-RNSVLMSG 933 (1001)
Q Consensus 919 ~DL~eLA-rNSV~~Sf 933 (1001)
.++.+++ .|+.++.+
T Consensus 341 ~~~~~~aT~~gA~~lg 356 (442)
T PRK07203 341 PESPAMLFENNNKIAE 356 (442)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 4555544 56666654
No 48
>PRK07583 cytosine deaminase-like protein; Validated
Probab=96.55 E-value=0.013 Score=68.50 Aligned_cols=124 Identities=16% Similarity=0.173 Sum_probs=84.3
Q ss_pred chhHHHHHHHHHhhhchhhhhhcCCCCccccCCCChhhh-----h------c-c-----------------CC-----cc
Q psy47 799 CYAYYQYYTYANLTVLNQSTGRRSRRETNLQPGAYKADA-----L------T-S-----------------KF-----PN 844 (1001)
Q Consensus 799 p~~y~~~y~~ANi~~LN~~Rr~~GL~t~~lt~HaGEaG~-----l------L-r-----------------~~-----P~ 844 (1001)
...++..|..| ++.|+. +..||+|.+- + . + .+ ..
T Consensus 211 d~~l~~i~~lA---------~~~G~~---v~vH~~E~~~~~~~~l~~~~~~~~~~G~~~~v~i~H~~~l~~~~~~~~~~~ 278 (438)
T PRK07583 211 DAQLDRLFRLA---------RERGLD---LDLHVDETGDPASRTLKAVAEAALRNGFEGKVTCGHCCSLAVQPEEQAQAT 278 (438)
T ss_pred HHHHHHHHHHH---------HHhCCC---cEEeECCCCCchHHHHHHHHHHHHHhCCCCCEEEEeccchhcCCHHHHHHH
Confidence 35678888888 999999 9999988630 0 0 0 01 12
Q ss_pred hhhhHhccCceEEEEecCcccccccc--------ccCCChHHHHHCCCcEEEcCCCcc--ccCCCCCChHHHHHHHHHHc
Q psy47 845 AQDIYDHEITIRIAMSPLSNNSLFLN--------YHRNPLPEYLARGLVVSLSTDDPL--QFHFTKEPLMEEYSIAAQVW 914 (1001)
Q Consensus 845 LqyLyy~e~qIpLEvCPlSN~~l~~~--------y~~HPf~~~~~~Gl~VsLsTDDPl--~F~~T~t~L~eEY~iAa~~~ 914 (1001)
++.+ ++.||.+.+||++|..+... -...|++.++++|++|+|+||... ++-+...++.+....+....
T Consensus 279 i~~l--a~~gv~vv~~P~~~~~l~~~~~~~~p~~~~~~~v~~l~~aGV~valGtD~~~d~~~p~g~~~~~~~~~~a~~~~ 356 (438)
T PRK07583 279 IALV--AEAGIAIVSLPMCNLYLQDRQPGRTPRWRGVTLVHELKAAGIPVAVASDNCRDPFYAYGDHDMLEVFREAVRIL 356 (438)
T ss_pred HHHH--HHcCCeEEECcchhhhhcCCCcCCCCCCCCcchHHHHHHCCCeEEEEeCCCCCCCCCCCCcCHHHHHHHHHHHH
Confidence 3677 88999999999999766421 123689999999999999999742 11222346677777666543
Q ss_pred --CCCHHHHHH-HHHHHHHHcCCCh
Q psy47 915 --KLSSCDMCE-LARNSVLMSGFPH 936 (1001)
Q Consensus 915 --~Ls~~DL~e-LArNSV~~Sf~~~ 936 (1001)
+.+..+... ...|+...-+.+.
T Consensus 357 ~~~~~~~~al~~~T~~~A~~lg~~~ 381 (438)
T PRK07583 357 HLDHPYDDWPAAVTTTPADIMGLPD 381 (438)
T ss_pred hcCCcHHHHHHHHhHHHHHHcCCCC
Confidence 455655544 4457777777653
No 49
>PRK06380 metal-dependent hydrolase; Provisional
Probab=96.51 E-value=0.0064 Score=70.08 Aligned_cols=119 Identities=14% Similarity=0.151 Sum_probs=84.4
Q ss_pred chhHHHHHHHHHhhhchhhhhhcCCCCccccCCCChhh--h-----------h--------c--c--------CCc-chh
Q psy47 799 CYAYYQYYTYANLTVLNQSTGRRSRRETNLQPGAYKAD--A-----------L--------T--S--------KFP-NAQ 846 (1001)
Q Consensus 799 p~~y~~~y~~ANi~~LN~~Rr~~GL~t~~lt~HaGEaG--~-----------l--------L--r--------~~P-~Lq 846 (1001)
+......+..| +++|+. +..|++|.. + + + + .++ .++
T Consensus 185 ~e~l~~~~~~A---------~~~g~~---v~~H~~e~~~~~~~~~~~~g~~~ie~~~~~g~l~~~~~~~H~~~l~~~d~~ 252 (418)
T PRK06380 185 DETYLKAKEIA---------EKYDTI---MHMHLSETRKEVYDHVKRTGERPVEHLEKIGFLNSKLIAAHCVWATYHEIK 252 (418)
T ss_pred HHHHHHHHHHH---------HHcCCC---EEEEeCCcHHHHHHHHHHhCCCHHHHHHHCCCCCCCeEEEEeecCCHHHHH
Confidence 34566777777 889998 999999861 0 0 0 0 122 346
Q ss_pred hhHhccCceEEEEecCccccccccccCCChHHHHHCCCcEEEcCCCccccCCCCCChHHHHHHHHHHc--------CCCH
Q psy47 847 DIYDHEITIRIAMSPLSNNSLFLNYHRNPLPEYLARGLVVSLSTDDPLQFHFTKEPLMEEYSIAAQVW--------KLSS 918 (1001)
Q Consensus 847 yLyy~e~qIpLEvCPlSN~~l~~~y~~HPf~~~~~~Gl~VsLsTDDPl~F~~T~t~L~eEY~iAa~~~--------~Ls~ 918 (1001)
.+ ++.++.+.+||.||..++. -...|+++++++|++|+|+||.+.... ...+.++...++... .++.
T Consensus 253 ~l--a~~g~~v~~~P~sn~~l~~-~g~~p~~~~~~~Gv~v~lGTD~~~~~~--~~d~~~~~~~~~~~~~~~~~~~~~~~~ 327 (418)
T PRK06380 253 LL--SKNGVKVSWNSVSNFKLGT-GGSPPIPEMLDNGINVTIGTDSNGSNN--SLDMFEAMKFSALSVKNERWDASIIKA 327 (418)
T ss_pred HH--HHcCCEEEECHHHHHhhcc-CCCCcHHHHHHCCCeEEEcCCCCcCCC--CcCHHHHHHHHHHHhhhccCCCCcCCH
Confidence 77 8899999999999987663 134699999999999999999875322 246677777665422 2677
Q ss_pred HHHHHHHH-HHHHHcCC
Q psy47 919 CDMCELAR-NSVLMSGF 934 (1001)
Q Consensus 919 ~DL~eLAr-NSV~~Sf~ 934 (1001)
.++.+++- |+.++.+.
T Consensus 328 ~~~l~~aT~~gA~~lg~ 344 (418)
T PRK06380 328 QEILDFATINAAKALEL 344 (418)
T ss_pred HHHHHHHHHHHHHHhCC
Confidence 77776664 88777665
No 50
>TIGR02022 hutF formiminoglutamate deiminase. In some species, histidine utilization goes via urocanate to glutamate in four step, the last being removal of formamide. This model describes an alternate fourth step, formiminoglutamate hydrolase, which leads to N-formyl-L-glutamate. This product may be acted on by formylglutamate amidohydrolase (TIGR02017) and bypass glutamate as a product during its degradation. Alternatively, removal of formate (by EC 3.5.1.68) would yield glutamate.
Probab=96.51 E-value=0.0077 Score=70.75 Aligned_cols=115 Identities=10% Similarity=0.010 Sum_probs=81.3
Q ss_pred CchhHHHHHHHHHhhhchhhhhhcCCCCccccCCCChh-----------h-----------hh-----c----cCCc-ch
Q psy47 798 PCYAYYQYYTYANLTVLNQSTGRRSRRETNLQPGAYKA-----------D-----------AL-----T----SKFP-NA 845 (1001)
Q Consensus 798 Pp~~y~~~y~~ANi~~LN~~Rr~~GL~t~~lt~HaGEa-----------G-----------~l-----L----r~~P-~L 845 (1001)
++......+. | +++|+. +..|++|. | ++ + ..++ .+
T Consensus 214 s~e~l~~~~~-a---------~~~g~~---v~~H~~e~~~e~~~~~~~~G~~~v~~l~~~g~l~~~~~~~H~~~l~~~d~ 280 (455)
T TIGR02022 214 TPEQLAAVLQ-A---------SDRQAP---VHIHVAEQQKEVDDCLAWSGRRPVEWLLDHGPVDARWCLVHATHLTDEET 280 (455)
T ss_pred CHHHHHHHHH-H---------HhCCCc---eEEEECCChHHHHHHHHHhCCCHHHHHHHcCCCCCCEEEEEeecCCHHHH
Confidence 3445556666 6 678888 99999975 2 01 0 1133 55
Q ss_pred hhhHhccCceEEEEecCccccccccccCCChHHHHHCCCcEEEcCCCccccCCCCCChHHHHHHHHHHcC----------
Q psy47 846 QDIYDHEITIRIAMSPLSNNSLFLNYHRNPLPEYLARGLVVSLSTDDPLQFHFTKEPLMEEYSIAAQVWK---------- 915 (1001)
Q Consensus 846 qyLyy~e~qIpLEvCPlSN~~l~~~y~~HPf~~~~~~Gl~VsLsTDDPl~F~~T~t~L~eEY~iAa~~~~---------- 915 (1001)
+.| ++.++.+..||.||..++.. --|+++|+++|++|+|+||..- . .++.+|...++....
T Consensus 281 ~~l--a~~g~~v~~~P~sn~~lg~g--~~pi~~l~~~Gv~v~lGTD~~~--~---~d~~~~m~~a~~~~~~~~~~~~~~~ 351 (455)
T TIGR02022 281 ALL--ARSGAVAGLCPTTEANLGDG--IFPAVDFVAAGGRFGIGSDSHV--V---IDVAEELRQLEYGQRLRDRARNVLA 351 (455)
T ss_pred HHH--HHcCCeEEEChhhhccccCC--CCCHHHHHHCCCeEEEECCCCC--C---CCHHHHHHHHHHHHHHHhccccccc
Confidence 777 88999999999999887754 4699999999999999999532 2 478888887765422
Q ss_pred -----CCHHHH-HHHHHHHHHHcCC
Q psy47 916 -----LSSCDM-CELARNSVLMSGF 934 (1001)
Q Consensus 916 -----Ls~~DL-~eLArNSV~~Sf~ 934 (1001)
++..++ .-...|+.++-++
T Consensus 352 ~~~~~~~~~~~l~~aT~~gAralg~ 376 (455)
T TIGR02022 352 AGPGPSVGRALYDAALLGGAQALGL 376 (455)
T ss_pred CCcccchHHHHHHHHHHHHHHHhCC
Confidence 234454 4455688877775
No 51
>PRK06038 N-ethylammeline chlorohydrolase; Provisional
Probab=96.47 E-value=0.012 Score=68.60 Aligned_cols=120 Identities=22% Similarity=0.228 Sum_probs=87.0
Q ss_pred CchhHHHHHHHHHhhhchhhhhhcCCCCccccCCCChh-----------hh-----h-----c----------cCCc-ch
Q psy47 798 PCYAYYQYYTYANLTVLNQSTGRRSRRETNLQPGAYKA-----------DA-----L-----T----------SKFP-NA 845 (1001)
Q Consensus 798 Pp~~y~~~y~~ANi~~LN~~Rr~~GL~t~~lt~HaGEa-----------G~-----l-----L----------r~~P-~L 845 (1001)
++......+..| +++|+. +..||+|. |. + + ..++ .+
T Consensus 188 s~e~l~~~~~~A---------~~~g~~---v~~H~~e~~~~~~~~~~~~G~~~i~~l~~~g~l~~r~~~~H~~~l~~~~~ 255 (430)
T PRK06038 188 SEEFLSKVKKLA---------NKDGVG---IHIHVLETEAELNQMKEQYGMCSVNYLDDIGFLGPDVLAAHCVWLSDGDI 255 (430)
T ss_pred CHHHHHHHHHHH---------HHcCCc---EEEEcCCCHHHHHHHHHHhCCCHHHHHHHcCCCCCCeEEEEEecCCHHHH
Confidence 345666777778 889998 99999987 20 0 0 0122 44
Q ss_pred hhhHhccCceEEEEecCccccccccccCCChHHHHHCCCcEEEcCCCccccCCCCCChHHHHHHHHHH--------cCCC
Q psy47 846 QDIYDHEITIRIAMSPLSNNSLFLNYHRNPLPEYLARGLVVSLSTDDPLQFHFTKEPLMEEYSIAAQV--------WKLS 917 (1001)
Q Consensus 846 qyLyy~e~qIpLEvCPlSN~~l~~~y~~HPf~~~~~~Gl~VsLsTDDPl~F~~T~t~L~eEY~iAa~~--------~~Ls 917 (1001)
+.+ ++.|+.+..||.||..++..+ .|+++++++|++|+++||.+.-.+ .-.+.+|...+... .+++
T Consensus 256 ~~l--a~~g~~v~~~P~~n~~~~~~~--~p~~~~~~~Gv~v~lGtD~~~~~~--~~d~~~~~~~a~~~~~~~~~~~~~~~ 329 (430)
T PRK06038 256 EIL--RERGVNVSHNPVSNMKLASGI--APVPKLLERGVNVSLGTDGCASNN--NLDMFEEMKTAALLHKVNTMDPTALP 329 (430)
T ss_pred HHH--HhcCCEEEEChHHhhhhccCC--CCHHHHHHCCCeEEEeCCCCccCC--CcCHHHHHHHHHHHhhhccCCCCcCC
Confidence 777 889999999999998766433 599999999999999999764221 24678888776533 2467
Q ss_pred HHHHHHHHH-HHHHHcCCC
Q psy47 918 SCDMCELAR-NSVLMSGFP 935 (1001)
Q Consensus 918 ~~DL~eLAr-NSV~~Sf~~ 935 (1001)
..+..+++- |+....+.+
T Consensus 330 ~~~al~~aT~~gA~~lg~~ 348 (430)
T PRK06038 330 ARQVLEMATVNGAKALGIN 348 (430)
T ss_pred HHHHHHHHhHHHHHHhCCC
Confidence 777777665 888887764
No 52
>cd01299 Met_dep_hydrolase_A Metallo-dependent hydrolases, subgroup A is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site. The vast majority of the members have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. The function of this subgroup is unknown.
Probab=96.43 E-value=0.0046 Score=68.79 Aligned_cols=121 Identities=16% Similarity=0.098 Sum_probs=87.5
Q ss_pred CCchhHHHHHHHHHhhhchhhhhhcCCCCccccCCCChhh----hhc----------cCCcch-hhhHhccCceEEEEec
Q psy47 797 NPCYAYYQYYTYANLTVLNQSTGRRSRRETNLQPGAYKAD----ALT----------SKFPNA-QDIYDHEITIRIAMSP 861 (1001)
Q Consensus 797 nPp~~y~~~y~~ANi~~LN~~Rr~~GL~t~~lt~HaGEaG----~lL----------r~~P~L-qyLyy~e~qIpLEvCP 861 (1001)
-++..+...+..| ++.|+. ++.||++.. ++. ..++.+ +.+ ++++|.+..||
T Consensus 157 ~~~e~l~~~~~~A---------~~~g~~---v~~H~~~~~~i~~~l~~G~~~i~H~~~~~~~~~~~l--~~~g~~~~~t~ 222 (342)
T cd01299 157 FSEEELRAIVDEA---------HKAGLY---VAAHAYGAEAIRRAIRAGVDTIEHGFLIDDETIELM--KEKGIFLVPTL 222 (342)
T ss_pred cCHHHHHHHHHHH---------HHcCCE---EEEEeCCHHHHHHHHHcCCCEEeecCCCCHHHHHHH--HHCCcEEeCcH
Confidence 3456777788888 889999 999998753 110 124444 777 88999999999
Q ss_pred Ccccccc-------c------------cccCCChHHHHHCCCcEEEcCCCcc--ccCCCCCChHHHHHHHHHHcCCCHHH
Q psy47 862 LSNNSLF-------L------------NYHRNPLPEYLARGLVVSLSTDDPL--QFHFTKEPLMEEYSIAAQVWKLSSCD 920 (1001)
Q Consensus 862 lSN~~l~-------~------------~y~~HPf~~~~~~Gl~VsLsTDDPl--~F~~T~t~L~eEY~iAa~~~~Ls~~D 920 (1001)
.++..+. . .-...|++.+.++|++|+++||.+. ..+ ..+..|...+.. .+++..+
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~GTD~~~~~~~~---~~~~~e~~~~~~-~~~~~~~ 298 (342)
T cd01299 223 ATYEALAAEGAAPGLPADSAEKVALVLEAGRDALRRAHKAGVKIAFGTDAGFPVPPH---GWNARELELLVK-AGGTPAE 298 (342)
T ss_pred HHHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHHHHcCCeEEEecCCCCCCCch---hHHHHHHHHHHH-hCCCHHH
Confidence 9876431 0 0123688999999999999999985 333 467788876554 6889988
Q ss_pred HHHHH-HHHHHHcCCC
Q psy47 921 MCELA-RNSVLMSGFP 935 (1001)
Q Consensus 921 L~eLA-rNSV~~Sf~~ 935 (1001)
..+++ .|+....+.+
T Consensus 299 al~~~T~~~a~~~g~~ 314 (342)
T cd01299 299 ALRAATANAAELLGLS 314 (342)
T ss_pred HHHHHHHHHHHHhCcc
Confidence 87766 5887776654
No 53
>PRK08418 chlorohydrolase; Provisional
Probab=96.38 E-value=0.0094 Score=69.14 Aligned_cols=85 Identities=19% Similarity=0.141 Sum_probs=63.1
Q ss_pred chhhhHhccCceEEEEecCccccccccccCCChHHHHHCCCcEEEcCCCccccCCCCCChHHHHHHHHHHc-CCC----H
Q psy47 844 NAQDIYDHEITIRIAMSPLSNNSLFLNYHRNPLPEYLARGLVVSLSTDDPLQFHFTKEPLMEEYSIAAQVW-KLS----S 918 (1001)
Q Consensus 844 ~LqyLyy~e~qIpLEvCPlSN~~l~~~y~~HPf~~~~~~Gl~VsLsTDDPl~F~~T~t~L~eEY~iAa~~~-~Ls----~ 918 (1001)
+++.| ++.++.+..||.||..++..+ -|+++|+++|++|+|+||.+.-.+ .-.+.+|...++... +.+ .
T Consensus 268 di~~l--a~~g~~v~~cP~sn~~lg~g~--~p~~~~~~~Gi~v~lGtD~~~~~~--~~~~~~em~~~~~~~~~~~~~~~~ 341 (408)
T PRK08418 268 ELEKI--KSKNASITHCPFSNRLLSNKA--LDLEKAKKAGINYSIATDGLSSNI--SLSLLDELRAALLTHANMPLLELA 341 (408)
T ss_pred HHHHH--HHcCCcEEECHhHHHHhcCCC--ccHHHHHhCCCeEEEeCCCCCCCC--CcCHHHHHHHHHHHhccCCccccH
Confidence 56777 889999999999998887653 699999999999999999754211 257889998777543 222 3
Q ss_pred HHHHHH-HHHHHHHcCC
Q psy47 919 CDMCEL-ARNSVLMSGF 934 (1001)
Q Consensus 919 ~DL~eL-ArNSV~~Sf~ 934 (1001)
.++.++ .+|+.++-+.
T Consensus 342 ~~~l~~aT~~gA~alg~ 358 (408)
T PRK08418 342 KILLLSATRYGAKALGL 358 (408)
T ss_pred HHHHHHHHHHHHHHhCC
Confidence 455444 4677777665
No 54
>COG0402 SsnA Cytosine deaminase and related metal-dependent hydrolases [Nucleotide transport and metabolism / General function prediction only]
Probab=96.17 E-value=0.1 Score=60.62 Aligned_cols=85 Identities=21% Similarity=0.213 Sum_probs=61.0
Q ss_pred chhhhHhccCceEEEEecCccccccccccCCChHHHHHCCCcEEEcCCCccccCCCCCChHHHHHHHHHHcCCCH----H
Q psy47 844 NAQDIYDHEITIRIAMSPLSNNSLFLNYHRNPLPEYLARGLVVSLSTDDPLQFHFTKEPLMEEYSIAAQVWKLSS----C 919 (1001)
Q Consensus 844 ~LqyLyy~e~qIpLEvCPlSN~~l~~~y~~HPf~~~~~~Gl~VsLsTDDPl~F~~T~t~L~eEY~iAa~~~~Ls~----~ 919 (1001)
++..+ +++++.+..||+||..|+.. -.|+++++++|++|.+.||.-+.-+ .-.+.+|+..|+....+.. .
T Consensus 262 e~~~l--~~~g~~v~~cP~sN~~L~sG--~~p~~~~~~~gv~v~~gTD~~~~~~--~~d~l~~~~~a~~l~~~~~~~~~~ 335 (421)
T COG0402 262 ELELL--AESGASVVHCPRSNLKLGSG--IAPVRRLLERGVNVALGTDGAASNN--VLDMLREMRTADLLQKLAGGLLAA 335 (421)
T ss_pred HHHHH--hhCCCeEEECcchhccccCC--CCCHHHHHHcCCCEEEecCCccccC--hHHHHHHHHHHHHHHHhhcCCCcc
Confidence 34555 78999999999999999875 5799999999999999999866432 1367788877765543332 2
Q ss_pred H-----HHHHHHHHHHHcCC
Q psy47 920 D-----MCELARNSVLMSGF 934 (1001)
Q Consensus 920 D-----L~eLArNSV~~Sf~ 934 (1001)
. +.-...|+.++-+.
T Consensus 336 ~~~~~~l~~aT~~gA~alg~ 355 (421)
T COG0402 336 QLPGEALDMATLGGAKALGL 355 (421)
T ss_pred cchHHHHHHHHhhHHHHcCC
Confidence 2 33344566666653
No 55
>PRK09229 N-formimino-L-glutamate deiminase; Validated
Probab=96.13 E-value=0.016 Score=67.99 Aligned_cols=82 Identities=16% Similarity=0.139 Sum_probs=61.6
Q ss_pred chhhhHhccCceEEEEecCccccccccccCCChHHHHHCCCcEEEcCCCccccCCCCCChHHHHHHHHHH----------
Q psy47 844 NAQDIYDHEITIRIAMSPLSNNSLFLNYHRNPLPEYLARGLVVSLSTDDPLQFHFTKEPLMEEYSIAAQV---------- 913 (1001)
Q Consensus 844 ~LqyLyy~e~qIpLEvCPlSN~~l~~~y~~HPf~~~~~~Gl~VsLsTDDPl~F~~T~t~L~eEY~iAa~~---------- 913 (1001)
.++.+ ++.++.+.+||.||..++.. --|+++++++|++|+|+||.+. . ..+.++...+...
T Consensus 279 d~~~l--a~~g~~v~~~P~sn~~lg~g--~~p~~~l~~~Gv~v~lGtD~~~--~---~d~~~~~~~~~~~~~~~~~~~~~ 349 (456)
T PRK09229 279 ETARL--ARSGAVAGLCPTTEANLGDG--IFPAVDYLAAGGRFGIGSDSHV--S---IDLVEELRLLEYGQRLRDRRRNV 349 (456)
T ss_pred HHHHH--HHcCCeEEECchhhhhhcCC--CCCHHHHHHCCCeEEEecCCCC--C---CCHHHHHHHHHHHHHHhhcCCcc
Confidence 45777 88999999999999877753 3699999999999999999643 2 3577777766532
Q ss_pred -----cCCCHHHHHHHH-HHHHHHcCC
Q psy47 914 -----WKLSSCDMCELA-RNSVLMSGF 934 (1001)
Q Consensus 914 -----~~Ls~~DL~eLA-rNSV~~Sf~ 934 (1001)
..++..++.+++ .|+..+.+.
T Consensus 350 ~~~~~~~~~~~~~l~~aT~~gA~alg~ 376 (456)
T PRK09229 350 LAAAAQPSVGRRLFDAALAGGAQALGR 376 (456)
T ss_pred cccccccchHHHHHHHHHHHHHHHhCC
Confidence 133566676554 688887775
No 56
>PRK08203 hydroxydechloroatrazine ethylaminohydrolase; Reviewed
Probab=96.11 E-value=0.025 Score=66.05 Aligned_cols=119 Identities=19% Similarity=0.106 Sum_probs=85.3
Q ss_pred chhHHHHHHHHHhhhchhhhhhcCCCCccccCCCChhh-----hh----------------c--c--------CCc-chh
Q psy47 799 CYAYYQYYTYANLTVLNQSTGRRSRRETNLQPGAYKAD-----AL----------------T--S--------KFP-NAQ 846 (1001)
Q Consensus 799 p~~y~~~y~~ANi~~LN~~Rr~~GL~t~~lt~HaGEaG-----~l----------------L--r--------~~P-~Lq 846 (1001)
+..+...+..| +++|+. +..|++|.. ++ + + .++ .++
T Consensus 213 ~e~l~~~~~~A---------~~~g~~---v~~H~~e~~~~~~~~~~~~g~~~~~~l~~~g~l~~~~~~~H~~~l~~~~~~ 280 (451)
T PRK08203 213 RELMRESAALA---------RRLGVR---LHTHLAETLDEEAFCLERFGMRPVDYLEDLGWLGPDVWLAHCVHLDDAEIA 280 (451)
T ss_pred HHHHHHHHHHH---------HHcCCc---EEEEeCCCHHHHHHHHHHhCCCHHHHHHHcCCCCCCeEEEEEeCCCHHHHH
Confidence 45566677777 888988 999999862 00 0 0 133 457
Q ss_pred hhHhccCceEEEEecCccccccccccCCChHHHHHCCCcEEEcCCCccccCCCCCChHHHHHHHHHHc-------CCCHH
Q psy47 847 DIYDHEITIRIAMSPLSNNSLFLNYHRNPLPEYLARGLVVSLSTDDPLQFHFTKEPLMEEYSIAAQVW-------KLSSC 919 (1001)
Q Consensus 847 yLyy~e~qIpLEvCPlSN~~l~~~y~~HPf~~~~~~Gl~VsLsTDDPl~F~~T~t~L~eEY~iAa~~~-------~Ls~~ 919 (1001)
.+ ++.++.+..||.||..++. ...|++.++++|++|+++||.+.-.. ...+.+|...+.... .++..
T Consensus 281 ~l--a~~g~~v~~~P~~~~~l~~--~~~~~~~~~~~Gv~v~lGtD~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~i~~~ 354 (451)
T PRK08203 281 RL--ARTGTGVAHCPCSNMRLAS--GIAPVRELRAAGVPVGLGVDGSASND--GSNLIGEARQALLLQRLRYGPDAMTAR 354 (451)
T ss_pred HH--HhcCCeEEECcHHhhhhcc--CCCCHHHHHHCCCeEEEecCCCccCC--CcCHHHHHHHHHHHhhcccCCCCCCHH
Confidence 77 8899999999999987764 34699999999999999999875321 145667776554322 26788
Q ss_pred HHHHHH-HHHHHHcCCC
Q psy47 920 DMCELA-RNSVLMSGFP 935 (1001)
Q Consensus 920 DL~eLA-rNSV~~Sf~~ 935 (1001)
++.+++ .|+....+.+
T Consensus 355 ~~l~~~T~~~A~~lg~~ 371 (451)
T PRK08203 355 EALEWATLGGARVLGRD 371 (451)
T ss_pred HHHHHHHHHHHHHhCCC
Confidence 876665 5888887765
No 57
>PRK07228 N-ethylammeline chlorohydrolase; Provisional
Probab=95.93 E-value=0.029 Score=65.25 Aligned_cols=121 Identities=21% Similarity=0.196 Sum_probs=85.8
Q ss_pred CchhHHHHHHHHHhhhchhhhhhcCCCCccccCCCChhh-----------h----------hc--c--------CCc-ch
Q psy47 798 PCYAYYQYYTYANLTVLNQSTGRRSRRETNLQPGAYKAD-----------A----------LT--S--------KFP-NA 845 (1001)
Q Consensus 798 Pp~~y~~~y~~ANi~~LN~~Rr~~GL~t~~lt~HaGEaG-----------~----------lL--r--------~~P-~L 845 (1001)
++......+..| +++|+. +..||.|.. . ++ + .++ .+
T Consensus 197 ~~~~l~~~~~~a---------~~~g~~---v~~H~~e~~~~~~~~~~~~g~~~~~~l~~~g~~~~~~~l~H~~~~~~~~~ 264 (445)
T PRK07228 197 TEELLRGVRDLA---------DEYGVR---IHTHASENRGEIETVEEETGMRNIHYLDEVGLTGEDLILAHCVWLDEEER 264 (445)
T ss_pred CHHHHHHHHHHH---------HHcCCc---EEEEeCCCHHHHHHHHHHhCCCHHHHHHHCCCCCCCcEEEEEecCCHHHH
Confidence 455667777777 888998 999997742 0 00 0 133 34
Q ss_pred hhhHhccCceEEEEecCccccccccccCCChHHHHHCCCcEEEcCCCccccCCCCCChHHHHHHHHHH--------cCCC
Q psy47 846 QDIYDHEITIRIAMSPLSNNSLFLNYHRNPLPEYLARGLVVSLSTDDPLQFHFTKEPLMEEYSIAAQV--------WKLS 917 (1001)
Q Consensus 846 qyLyy~e~qIpLEvCPlSN~~l~~~y~~HPf~~~~~~Gl~VsLsTDDPl~F~~T~t~L~eEY~iAa~~--------~~Ls 917 (1001)
+.+ ++.|+.+..||.||..++.. ..|++.++++|++|+|+||.+.... ..++.+++..+... -.++
T Consensus 265 ~~~--~~~g~~v~~~P~~~~~~~~~--~~p~~~~~~~Gv~v~lGtD~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~s 338 (445)
T PRK07228 265 EIL--AETGTHVTHCPSSNLKLASG--IAPVPDLLERGINVALGADGAPCNN--TLDPFTEMRQAALIQKVDRLGPTAMP 338 (445)
T ss_pred HHH--HHcCCeEEEChHHhhhcccc--cCcHHHHHHCCCeEEEcCCCCccCC--CccHHHHHHHHHHHhhhccCCCcccC
Confidence 677 88999999999999876543 4699999999999999999876432 13566777655432 2478
Q ss_pred HHHHHHHH-HHHHHHcCCCh
Q psy47 918 SCDMCELA-RNSVLMSGFPH 936 (1001)
Q Consensus 918 ~~DL~eLA-rNSV~~Sf~~~ 936 (1001)
..++.+++ .|+....+.++
T Consensus 339 ~~~al~~~T~~~A~~lg~~~ 358 (445)
T PRK07228 339 ARTVFEMATLGGAKAAGFED 358 (445)
T ss_pred HHHHHHHHHHHHHHHhCCCC
Confidence 88877766 58888877643
No 58
>PRK07572 cytosine deaminase; Validated
Probab=95.82 E-value=0.029 Score=65.23 Aligned_cols=122 Identities=16% Similarity=0.185 Sum_probs=80.7
Q ss_pred hhHHHHHHHHHhhhchhhhhhcCCCCccccCCCChhh------------------hhcc---CC-------------cch
Q psy47 800 YAYYQYYTYANLTVLNQSTGRRSRRETNLQPGAYKAD------------------ALTS---KF-------------PNA 845 (1001)
Q Consensus 800 ~~y~~~y~~ANi~~LN~~Rr~~GL~t~~lt~HaGEaG------------------~lLr---~~-------------P~L 845 (1001)
......+..| +++|+. +..||.|.. +.-+ .| ..+
T Consensus 191 e~l~~~~~~A---------~~~g~~---v~~H~~e~~~~~~~~~~~~~~~~~~~G~~~~v~~~H~~~l~~~~~~~~~~~~ 258 (426)
T PRK07572 191 ESVRLLCEIA---------AERGLR---VDMHCDESDDPLSRHIETLAAETQRLGLQGRVAGSHLTSMHSMDNYYVSKLI 258 (426)
T ss_pred HHHHHHHHHH---------HHcCCC---eEEEECCCCChhHHHHHHHHHHHHHhCCCCCEEEEccchhhcCCHHHHHHHH
Confidence 4555677777 899999 999998751 1101 01 235
Q ss_pred hhhHhccCceEEEEecCccccccc---c----ccCCChHHHHHCCCcEEEcCCCcc-cc-CCCCCChHHHHHHHHHHcCC
Q psy47 846 QDIYDHEITIRIAMSPLSNNSLFL---N----YHRNPLPEYLARGLVVSLSTDDPL-QF-HFTKEPLMEEYSIAAQVWKL 916 (1001)
Q Consensus 846 qyLyy~e~qIpLEvCPlSN~~l~~---~----y~~HPf~~~~~~Gl~VsLsTDDPl-~F-~~T~t~L~eEY~iAa~~~~L 916 (1001)
+.| +++|+.+..||+||..+.. . -.--|++++.++|++|+|+||.+. -| .+....+.++...++...++
T Consensus 259 ~~l--a~~g~~vv~~P~~n~~l~~~~~~~~~~~g~~~v~~l~~~GV~v~lGtD~~~~~~~~~~~~~~~e~~~~~~~~~~~ 336 (426)
T PRK07572 259 PLM--AEAGVNAIANPLINITLQGRHDTYPKRRGMTRVPELMAAGINVAFGHDCVMDPWYSLGSGDMLEVAHMGLHVAQM 336 (426)
T ss_pred HHH--HHcCCeEEECchhhhhhcCCCCCCCCCCCCcCHHHHHHCCCcEEEecCCCCCCCCCCCCCCHHHHHHHHHHHHcC
Confidence 777 8999999999999987642 1 123479999999999999999853 11 11135777777776777667
Q ss_pred CHHHHH-----HHHHHHHHHcCCC
Q psy47 917 SSCDMC-----ELARNSVLMSGFP 935 (1001)
Q Consensus 917 s~~DL~-----eLArNSV~~Sf~~ 935 (1001)
+..+-. -...|+.++-+.+
T Consensus 337 ~~~~~l~~~l~~aT~~~A~~lgl~ 360 (426)
T PRK07572 337 TGQDAMRACFDAVTVNPARIMGLE 360 (426)
T ss_pred CCHHHHHHHHHHhhcchHHhhCCC
Confidence 654422 2344665555543
No 59
>cd00443 ADA_AMPD Adenosine/AMP deaminase. Adenosine deaminases (ADAs) are present in pro- and eukaryotic organisms and catalyze the zinc dependent irreversible deamination of adenosine nucleosides to inosine nucleosides and ammonia. The eukaryotic AMP deaminase catalyzes a similar reaction leading to the hydrolytic removal of an amino group at the 6 position of the adenine nucleotide ring, a branch point in the adenylate catabolic pathway.
Probab=95.74 E-value=0.002 Score=71.88 Aligned_cols=87 Identities=23% Similarity=0.332 Sum_probs=72.4
Q ss_pred hhhhhhhccCCC-CCcchHHHHHHHHHHhhhhhccccceeeeeeecCChh-HHHHHhhhHhhCcccCCCceee--eccCc
Q psy47 345 RLREVFLKTDNY-LGGTYFARIIKEVAADLEESKYQNAELRLSIYGKSED-EWDKLATWAIESNVYSNNIRWL--IQIPR 420 (1001)
Q Consensus 345 ~lr~iflk~dn~-i~G~y~Ae~~k~v~~~le~skyq~~e~r~siyg~~~~-eW~~la~W~~~~~~~s~n~rW~--iqipr 420 (1001)
...++|..+.+. ..+++|++++++++.++.++..+++|+|++.++.... .|+...-|-.-+..++..-+|. |++..
T Consensus 26 ~f~~~f~~~~~~l~~~~~l~~~~~~~~~~~~~d~V~Y~E~r~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~~l 105 (305)
T cd00443 26 EFFEKFLLVHNLLQKGEALARALKEVIEEFAEDNVQYLELRTTPRLLETEKGLTKEQYWLLVIEGISEAKQWFPPIKVRL 105 (305)
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCCEEEEEEcchhhcCcccCCCHHHHHHHHHHHHHHHHHHcCCeeEeE
Confidence 577888888888 7789999999999999999999999999999875554 6777666766666666667777 99999
Q ss_pred eeeeccccchh
Q psy47 421 LYDIFKSNKLI 431 (1001)
Q Consensus 421 ly~~~~~~~~v 431 (1001)
+|.+.|..+..
T Consensus 106 I~~~~R~~~~~ 116 (305)
T cd00443 106 ILSVDRRGPYV 116 (305)
T ss_pred EEEEeCCCChh
Confidence 99999987664
No 60
>PRK06151 N-ethylammeline chlorohydrolase; Provisional
Probab=95.03 E-value=0.098 Score=62.09 Aligned_cols=117 Identities=14% Similarity=0.055 Sum_probs=82.7
Q ss_pred CCchhHHHHHHHHHhhhchhhhhhcCCCCccccCCCChh-----------h-----------hh-----c----cCCc--
Q psy47 797 NPCYAYYQYYTYANLTVLNQSTGRRSRRETNLQPGAYKA-----------D-----------AL-----T----SKFP-- 843 (1001)
Q Consensus 797 nPp~~y~~~y~~ANi~~LN~~Rr~~GL~t~~lt~HaGEa-----------G-----------~l-----L----r~~P-- 843 (1001)
.++.........| +++|+. +..||.|. | ++ + ..++
T Consensus 218 ~s~e~l~~~~~~A---------~~~g~~---v~~H~~e~~~~~~~~~~~~g~~~~~~~~~~g~l~~r~~l~H~~~l~~~~ 285 (488)
T PRK06151 218 CTVDLLRRTAAAA---------RELGCP---VRLHCAQGVLEVETVRRLHGTTPLEWLADVGLLGPRLLIPHATYISGSP 285 (488)
T ss_pred CCHHHHHHHHHHH---------HHCCCc---EEEEECCchHHHHHHHHHcCCCHHHHHHHcCCCCCCcEEEEEEEcCCcc
Confidence 4566777888888 899999 99999653 1 00 0 0133
Q ss_pred --------chhhhHhccCceEEEEecCccccccccccCCChHHHHHCCCcEEEcCCCccccCCCCCChHHHHHHHHHH--
Q psy47 844 --------NAQDIYDHEITIRIAMSPLSNNSLFLNYHRNPLPEYLARGLVVSLSTDDPLQFHFTKEPLMEEYSIAAQV-- 913 (1001)
Q Consensus 844 --------~LqyLyy~e~qIpLEvCPlSN~~l~~~y~~HPf~~~~~~Gl~VsLsTDDPl~F~~T~t~L~eEY~iAa~~-- 913 (1001)
.++.+ ++.++.+..||+||..++. .-.|++.++++|++|+|+||.. . ..+.++...+...
T Consensus 286 ~~~~~~~~~~~~l--a~~g~~v~~~P~~~~~~g~--~~~p~~~l~~~Gv~v~lGtD~~---~---~~~~~~~~~~~~~~~ 355 (488)
T PRK06151 286 RLNYSGGDDLALL--AEHGVSIVHCPLVSARHGS--ALNSFDRYREAGINLALGTDTF---P---PDMVMNMRVGLILGR 355 (488)
T ss_pred ccccCCHHHHHHH--HhcCCEEEECchhhhhhcc--ccccHHHHHHCCCcEEEECCCC---C---ccHHHHHHHHHHHHH
Confidence 34777 8899999999999976654 3479999999999999999962 2 3555665555422
Q ss_pred ------cCCCHHHHHHHH-HHHHHHcCCC
Q psy47 914 ------WKLSSCDMCELA-RNSVLMSGFP 935 (1001)
Q Consensus 914 ------~~Ls~~DL~eLA-rNSV~~Sf~~ 935 (1001)
..++..++.+++ .|+.+..+.+
T Consensus 356 ~~~~~~~~~~~~~al~~aT~~~A~~lg~~ 384 (488)
T PRK06151 356 VVEGDLDAASAADLFDAATLGGARALGRD 384 (488)
T ss_pred HhcCCCCCCCHHHHHHHHHHHHHHHhCCC
Confidence 126777776665 6787777764
No 61
>cd01300 YtcJ_like YtcJ_like metal dependent amidohydrolases. YtcJ is a Bacillus subtilis ORF of unknown function. The Arabidopsis homolog LAF3 has been identified as a factor required for photochrome A signalling.
Probab=92.39 E-value=0.39 Score=56.55 Aligned_cols=122 Identities=16% Similarity=0.090 Sum_probs=80.8
Q ss_pred CCchhHHHHHHHHHhhhchhhhhhcCCCCccccCCCChh-hh---h--------------cc--------CCcc-hhhhH
Q psy47 797 NPCYAYYQYYTYANLTVLNQSTGRRSRRETNLQPGAYKA-DA---L--------------TS--------KFPN-AQDIY 849 (1001)
Q Consensus 797 nPp~~y~~~y~~ANi~~LN~~Rr~~GL~t~~lt~HaGEa-G~---l--------------Lr--------~~P~-LqyLy 849 (1001)
.++......+..| +++|+. +..||... ++ + .+ .++. ++.+
T Consensus 292 ~~~e~l~~~~~~a---------~~~g~~---v~~Ha~gd~~i~~~l~~~~~~~~~~g~~~~r~~i~H~~~~~~~~~~~l- 358 (479)
T cd01300 292 ISPEELEELVRAA---------DEAGLQ---VAIHAIGDRAVDTVLDALEAALKDNPRADHRHRIEHAQLVSPDDIPRF- 358 (479)
T ss_pred CCHHHHHHHHHHH---------HHCCCC---EEEEEecHHHHHHHHHHHHHHHHhcCCCCCCceeeecccCCHHHHHHH-
Confidence 3566777777777 889999 99999533 10 0 01 1343 3777
Q ss_pred hccCceEEEEecCccccccc-----------cccCCChHHHHHCCCcEEEcCCCccccCCCCCChHHHHHHHHH------
Q psy47 850 DHEITIRIAMSPLSNNSLFL-----------NYHRNPLPEYLARGLVVSLSTDDPLQFHFTKEPLMEEYSIAAQ------ 912 (1001)
Q Consensus 850 y~e~qIpLEvCPlSN~~l~~-----------~y~~HPf~~~~~~Gl~VsLsTDDPl~F~~T~t~L~eEY~iAa~------ 912 (1001)
++.+|.+++||.++...+. .-.-.|++.+++.|++|+++||.|..-. .|+. +...+..
T Consensus 359 -~~~gv~~~~~P~~~~~~~~~~~~~~lg~~~~~~~~p~~~~~~~Gv~v~lGSD~~~~~~---~p~~-~~~~av~~~~~~~ 433 (479)
T cd01300 359 -AKLGVIASVQPNHLYSDGDAAEDRRLGEERAKRSYPFRSLLDAGVPVALGSDAPVAPP---DPLL-GIWAAVTRKTPGG 433 (479)
T ss_pred -HHcCCceEeCcccccCchHHHHHhcccHHHHhcCchHHHHHHCCCeeeccCCCCCCCC---CHHH-HHHHHheeeCCCC
Confidence 8899999999998754221 1123689999999999999999986432 3443 3333332
Q ss_pred ------HcCCCHHHHHHHH-HHHHHHcCCCh
Q psy47 913 ------VWKLSSCDMCELA-RNSVLMSGFPH 936 (1001)
Q Consensus 913 ------~~~Ls~~DL~eLA-rNSV~~Sf~~~ 936 (1001)
..++|..+..+++ .|+....+.++
T Consensus 434 ~~~~~~~~~ls~~~al~~~T~~~A~~lg~e~ 464 (479)
T cd01300 434 GVLGNPEERLSLEEALRAYTIGAAYAIGEED 464 (479)
T ss_pred CCCCCccccCCHHHHHHHHHHHHHHHhcccc
Confidence 2356778776655 68877776543
No 62
>cd01309 Met_dep_hydrolase_C Metallo-dependent hydrolases, subgroup C is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site. The vast majority of the members have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. The function of this subgroup is unknown.
Probab=89.52 E-value=1.3 Score=50.79 Aligned_cols=86 Identities=19% Similarity=0.180 Sum_probs=61.5
Q ss_pred hhhhHhccCceEEEEecCccccccc---cccCCChHHHHHCC-CcEEEcCCCccccCCCCCChHHHHHHHHHHcCCCHHH
Q psy47 845 AQDIYDHEITIRIAMSPLSNNSLFL---NYHRNPLPEYLARG-LVVSLSTDDPLQFHFTKEPLMEEYSIAAQVWKLSSCD 920 (1001)
Q Consensus 845 LqyLyy~e~qIpLEvCPlSN~~l~~---~y~~HPf~~~~~~G-l~VsLsTDDPl~F~~T~t~L~eEY~iAa~~~~Ls~~D 920 (1001)
++.| ++.++++.+||++|..... .-.-.|...+.++| ++|+++||.|.... ..+..+...+ ..++++..+
T Consensus 231 ~~~l--a~~gv~v~~~P~~~~~~~~~~~~~~~~~~~~l~~aGGv~valgsD~~~~~~---~~l~~~~~~a-~~~gl~~~~ 304 (359)
T cd01309 231 ADEL--AKHGIPVIYGPTLTLPKKVEEVNDAIDTNAYLLKKGGVAFAISSDHPVLNI---RNLNLEAAKA-VKYGLSYEE 304 (359)
T ss_pred HHHH--HHcCCCEEECccccccccHHHhhcchhhHHHHHHcCCceEEEECCCCCccc---hhHHHHHHHH-HHcCCCHHH
Confidence 3677 8899999999998754331 11235778999998 99999999986433 4566555544 457899888
Q ss_pred HHHH-HHHHHHHcCCCh
Q psy47 921 MCEL-ARNSVLMSGFPH 936 (1001)
Q Consensus 921 L~eL-ArNSV~~Sf~~~ 936 (1001)
..++ ..|+-..-+.++
T Consensus 305 al~~~T~n~A~~lg~~~ 321 (359)
T cd01309 305 ALKAITINPAKILGIED 321 (359)
T ss_pred HHHHHHHHHHHHhCCCC
Confidence 7664 468877777654
No 63
>KOG3968|consensus
Probab=86.81 E-value=1.7 Score=50.97 Aligned_cols=87 Identities=22% Similarity=0.143 Sum_probs=67.9
Q ss_pred CcchhhhHhccCceEEEEecCccccccccccCCChHHHHHCCCcEEEcCCCccccCCCCCChHHHHHHHHH---------
Q psy47 842 FPNAQDIYDHEITIRIAMSPLSNNSLFLNYHRNPLPEYLARGLVVSLSTDDPLQFHFTKEPLMEEYSIAAQ--------- 912 (1001)
Q Consensus 842 ~P~LqyLyy~e~qIpLEvCPlSN~~l~~~y~~HPf~~~~~~Gl~VsLsTDDPl~F~~T~t~L~eEY~iAa~--------- 912 (1001)
+..+.-+ .+++-.+..||+||..|+... -|.+++++.|+.|-|+||=-+ .++.++|..|+.
T Consensus 284 d~ei~~l--~k~g~svshCP~Sn~~L~sG~--~~vr~lL~~~v~VgLGtDv~~------~s~l~a~r~A~~~s~hL~~~~ 353 (439)
T KOG3968|consen 284 DEEIELL--AKRGCSVSHCPTSNSILGSGI--PRVRELLDIGVIVGLGTDVSG------CSILNALRQAMPMSMHLACVL 353 (439)
T ss_pred chhHHHH--HhcCCceEECCcchhhhccCC--ccHHHHHhcCceEeecCCccc------cccHHHHHHHHHHHHHHHhcc
Confidence 4455555 778999999999999998754 589999999999999999554 466777766653
Q ss_pred -HcCCCHHHHHHHHH-HHHHHcCCChhh
Q psy47 913 -VWKLSSCDMCELAR-NSVLMSGFPHGV 938 (1001)
Q Consensus 913 -~~~Ls~~DL~eLAr-NSV~~Sf~~~~~ 938 (1001)
..+||..++..+|- |+..+-+.++..
T Consensus 354 ~~~~Ls~~e~L~lATi~GA~aLg~d~~~ 381 (439)
T KOG3968|consen 354 DVMKLSMEEALYLATIGGAKALGRDDTH 381 (439)
T ss_pred CcccCCHHHHHHHHhccchhhccCCCcc
Confidence 26788888888885 788777766653
No 64
>cd01306 PhnM PhnM is believed to be a subunit of the membrane associated C-P lyase complex. C-P lyase is thought to catalyze the direct cleavage of inactivated C-P bonds to yield inorganic phosphate and the corresponding hydrocarbons. It is responsible for cleavage of alkylphosphonates, which are utilized as sole phosphorus sources by many bacteria.
Probab=86.63 E-value=4.4 Score=46.45 Aligned_cols=106 Identities=20% Similarity=0.140 Sum_probs=71.7
Q ss_pred hhcCCCCccccCCCChh--h--------hhccCCc----chhhhHhccCceEEEEecCccccccccccCCChHHHHHCCC
Q psy47 819 GRRSRRETNLQPGAYKA--D--------ALTSKFP----NAQDIYDHEITIRIAMSPLSNNSLFLNYHRNPLPEYLARGL 884 (1001)
Q Consensus 819 r~~GL~t~~lt~HaGEa--G--------~lLr~~P----~LqyLyy~e~qIpLEvCPlSN~~l~~~y~~HPf~~~~~~Gl 884 (1001)
+++|+. +..|+.+. + +.....| .++.+ +++|+.+.+|+.+.+.-+.....-|+..+++.|+
T Consensus 173 ~~~gl~---vasH~d~~~~~v~~a~~~Gv~~~E~p~t~e~a~~a--~~~G~~vv~gapn~lrg~s~~g~~~~~~ll~~Gv 247 (325)
T cd01306 173 RARGIP---LASHDDDTPEHVAEAHELGVVISEFPTTLEAAKAA--RELGLQTLMGAPNVVRGGSHSGNVSARELAAHGL 247 (325)
T ss_pred HHCCCc---EEEecCCChHHHHHHHHCCCeeccCCCCHHHHHHH--HHCCCEEEecCcccccCccccccHhHHHHHHCCC
Confidence 899999 99999764 2 2111222 23666 7899999998753332222223347899999999
Q ss_pred cEEEcCCCccccCCCCCChHHHHHHHHHHcCCCHHHHHHHH-HHHHHHcCCC
Q psy47 885 VVSLSTDDPLQFHFTKEPLMEEYSIAAQVWKLSSCDMCELA-RNSVLMSGFP 935 (1001)
Q Consensus 885 ~VsLsTDDPl~F~~T~t~L~eEY~iAa~~~~Ls~~DL~eLA-rNSV~~Sf~~ 935 (1001)
+++|+||... . ..+...+ .++...+++..+..+++ .|+...-+++
T Consensus 248 ~~al~SD~~p--~---sll~~~~-~la~~~gl~l~eAl~~aT~nPA~~lGl~ 293 (325)
T cd01306 248 LDILSSDYVP--A---SLLHAAF-RLADLGGWSLPEAVALVSANPARAVGLT 293 (325)
T ss_pred eEEEEcCCCc--H---hHHHHHH-HHHHHcCCCHHHHHHHHhHHHHHHcCCC
Confidence 9999999942 1 2333444 34455789999987766 4888888875
No 65
>PRK05985 cytosine deaminase; Provisional
Probab=85.99 E-value=3.4 Score=47.57 Aligned_cols=117 Identities=11% Similarity=0.075 Sum_probs=72.6
Q ss_pred CchhHHHHHHHHHhhhchhhhhhcCCCCccccCCCChhhh---------hc---------c-----------CCc----c
Q psy47 798 PCYAYYQYYTYANLTVLNQSTGRRSRRETNLQPGAYKADA---------LT---------S-----------KFP----N 844 (1001)
Q Consensus 798 Pp~~y~~~y~~ANi~~LN~~Rr~~GL~t~~lt~HaGEaG~---------lL---------r-----------~~P----~ 844 (1001)
++......+..| +++|+. +.+|+.|.+- +. + .++ .
T Consensus 189 ~~~~l~~~~~~A---------~~~g~~---i~~Hv~e~~d~~~~~~~~~~e~~~~~g~~~~~~i~H~~~l~~~~~~~~~~ 256 (391)
T PRK05985 189 PEGQLDIVFGLA---------ERHGVG---IDIHLHEPGELGAFQLERIAARTRALGMQGRVAVSHAFCLGDLPEREVDR 256 (391)
T ss_pred HHHHHHHHHHHH---------HHhCCC---cEEeeCCCCCccHHHHHHHHHHHHHhCCCCCEehhhhhhhhcCCHHHHHH
Confidence 345667778888 899998 9999987640 00 0 011 2
Q ss_pred -hhhhHhccCceEEEEecCccccccccccCCChHHHHHCCCcEEEcCCCcc-cc-CCCCCChHHHHHHHHHHcCCCHH--
Q psy47 845 -AQDIYDHEITIRIAMSPLSNNSLFLNYHRNPLPEYLARGLVVSLSTDDPL-QF-HFTKEPLMEEYSIAAQVWKLSSC-- 919 (1001)
Q Consensus 845 -LqyLyy~e~qIpLEvCPlSN~~l~~~y~~HPf~~~~~~Gl~VsLsTDDPl-~F-~~T~t~L~eEY~iAa~~~~Ls~~-- 919 (1001)
++.+ ++++|.+..||.+.. .--|++.+++.|++|+|+||++. -| -+..-.+.++...++...++...
T Consensus 257 ~i~~l--ae~g~~v~~~~~~~~------~~~~~~~l~~~Gv~v~lGtD~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 328 (391)
T PRK05985 257 LAERL--AEAGVAIMTNAPGSV------PVPPVAALRAAGVTVFGGNDGIRDTWWPYGNGDMLERAMLIGYRSGFRTDDE 328 (391)
T ss_pred HHHHH--HHcCCeEEEeCCCCC------CCCCHHHHHHCCCeEEEecCCCCCCCcCCCCCcHHHHHHHHHHHHccCChHH
Confidence 3666 789999999864421 22599999999999999999753 11 11123566666655555555432
Q ss_pred --HHHHHH-HHHHHHcCC
Q psy47 920 --DMCELA-RNSVLMSGF 934 (1001)
Q Consensus 920 --DL~eLA-rNSV~~Sf~ 934 (1001)
++.+++ .|+..+.+.
T Consensus 329 ~~~al~~~T~~~A~~lg~ 346 (391)
T PRK05985 329 LAAALDCVTHGGARALGL 346 (391)
T ss_pred HHHHHHHHcchhHHHhCC
Confidence 233333 355555554
No 66
>COG1228 HutI Imidazolonepropionase and related amidohydrolases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=84.09 E-value=2.7 Score=49.49 Aligned_cols=116 Identities=16% Similarity=0.101 Sum_probs=80.4
Q ss_pred HHHHHHHHhhhchhhhhhcCCCCccccCCCChh-hhhc-------------cCC-cchhhhHhcc--CceEEEEecCccc
Q psy47 803 YQYYTYANLTVLNQSTGRRSRRETNLQPGAYKA-DALT-------------SKF-PNAQDIYDHE--ITIRIAMSPLSNN 865 (1001)
Q Consensus 803 ~~~y~~ANi~~LN~~Rr~~GL~t~~lt~HaGEa-G~lL-------------r~~-P~LqyLyy~e--~qIpLEvCPlSN~ 865 (1001)
..++..| ++.|++ ++.||-+. |+.+ -.+ ...+.+ ++ .++++ -..+...
T Consensus 223 ~~~l~~a---------~~~g~~---v~~HA~~~~g~~~A~~~g~~s~~H~~~ld~~~~~~~--a~~~~g~~~-~~l~p~~ 287 (406)
T COG1228 223 RAVLAAA---------LKAGIP---VKAHAHGADGIKLAIRLGAKSAEHGTLLDHETAALL--AEKGAGTPV-PVLLPRT 287 (406)
T ss_pred HHHHHHH---------HHCCCc---eEEEecccchHHHHHHhCcceehhhhhcCHhHHHHH--hhccCCCcc-ccccchh
Confidence 4566667 889999 99999665 4211 112 233666 76 56551 1111222
Q ss_pred cccc-cccCCChHHHHHCCCcEEEcCCCcccc-CCCCCChHHHHHHHHHHcCCCHHHH-HHHHHHHHHHcCCChh
Q psy47 866 SLFL-NYHRNPLPEYLARGLVVSLSTDDPLQF-HFTKEPLMEEYSIAAQVWKLSSCDM-CELARNSVLMSGFPHG 937 (1001)
Q Consensus 866 ~l~~-~y~~HPf~~~~~~Gl~VsLsTDDPl~F-~~T~t~L~eEY~iAa~~~~Ls~~DL-~eLArNSV~~Sf~~~~ 937 (1001)
...+ .-...|++.+.+.|++|+|+||.+... + ..|.-+..+++..+ +|..+. .....|+.++-+..+.
T Consensus 288 ~~~l~e~~~~~~~~l~~~GV~vai~TD~~~~~~~---~~l~~~m~l~~~~g-mtp~EaL~a~T~naA~alG~~~~ 358 (406)
T COG1228 288 KFELRELDYKPARKLIDAGVKVAIGTDHNPGTSH---GSLALEMALAVRLG-MTPEEALKAATINAAKALGLADK 358 (406)
T ss_pred hhhhhcccchhHHHHHHCCCEEEEEcCCCCCchh---hHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHcCCccc
Confidence 2222 233567999999999999999999877 5 78999999999988 999996 5666799999887743
No 67
>PRK06846 putative deaminase; Validated
Probab=83.46 E-value=3.6 Score=47.88 Aligned_cols=103 Identities=15% Similarity=0.139 Sum_probs=70.1
Q ss_pred CchhHHHHHHHHHhhhchhhhhhcCCCCccccCCCChhh---h--------------hc-c-----------CC-cch--
Q psy47 798 PCYAYYQYYTYANLTVLNQSTGRRSRRETNLQPGAYKAD---A--------------LT-S-----------KF-PNA-- 845 (1001)
Q Consensus 798 Pp~~y~~~y~~ANi~~LN~~Rr~~GL~t~~lt~HaGEaG---~--------------lL-r-----------~~-P~L-- 845 (1001)
++..+...+..| +++|+. +..|..|.+ . ++ + .+ ..+
T Consensus 204 ~~~~l~~~~~lA---------~~~g~~---v~~Hv~e~~~~~~~~~~~~~~~~~~~gl~~~v~~~H~~~l~~~~~~e~~~ 271 (410)
T PRK06846 204 IEKSLDTMFQIA---------VDFNKG---VDIHLHDTGPLGVATIKYLVETTEEAQWKGKVTISHAFALGDLNEEEVEE 271 (410)
T ss_pred HHHHHHHHHHHH---------HHhCCC---cEEEECCCCChhHHHHHHHHHHHHHhCCCCCEEEEecchhhcCCHHHHHH
Confidence 345677888888 999999 999988752 0 00 0 01 122
Q ss_pred --hhhHhccCceEEEEecCccccccccccCCChHHHHHCCCcEEEcCCCcc--ccCCCCCChHHHHHHHHHHcCCCHHH
Q psy47 846 --QDIYDHEITIRIAMSPLSNNSLFLNYHRNPLPEYLARGLVVSLSTDDPL--QFHFTKEPLMEEYSIAAQVWKLSSCD 920 (1001)
Q Consensus 846 --qyLyy~e~qIpLEvCPlSN~~l~~~y~~HPf~~~~~~Gl~VsLsTDDPl--~F~~T~t~L~eEY~iAa~~~~Ls~~D 920 (1001)
+.+ ++.++.+..|+. ++. .--|++.|.++|++|+++||.|. ...+...+|.+|...++...+++..+
T Consensus 272 li~~l--a~~g~~v~~~~~----~~~--g~~p~~~l~~~Gv~v~lGtD~~~~~~~p~~~~d~~~~~~~~~~~~~~~~~~ 342 (410)
T PRK06846 272 LAERL--AAQGISITSTVP----IGR--LHMPIPLLHDKGVKVSLGTDSVIDHWSPFGTGDMLEKANLLAELYRWSDER 342 (410)
T ss_pred HHHHH--HHcCCeEEEeCC----CCC--CCCCHHHHHhCCCeEEEecCCCCCCCcCCCCCCHHHHHHHHHHHhcCCCHH
Confidence 346 788888876432 222 23699999999999999999763 11111247999999999887877664
No 68
>PRK15446 phosphonate metabolism protein PhnM; Provisional
Probab=74.98 E-value=18 Score=42.04 Aligned_cols=106 Identities=15% Similarity=0.044 Sum_probs=68.3
Q ss_pred hhcCCCCccccCCCChh--hh--------hccC---Ccch-hhhHhccCceEEEEecCccccccccccCCChHHHHHCCC
Q psy47 819 GRRSRRETNLQPGAYKA--DA--------LTSK---FPNA-QDIYDHEITIRIAMSPLSNNSLFLNYHRNPLPEYLARGL 884 (1001)
Q Consensus 819 r~~GL~t~~lt~HaGEa--G~--------lLr~---~P~L-qyLyy~e~qIpLEvCPlSN~~l~~~y~~HPf~~~~~~Gl 884 (1001)
++.|++ +..||.+. ++ .... +... +.+ +++++.+.+|+.++..-+.....-++.++++.|+
T Consensus 224 ~~~g~~---v~sH~~~~~~~i~~a~~~Gv~~~e~~~~~e~~~~~--~~~g~~v~~~~p~~~r~~~~~~~~~~~~~~~~Gv 298 (383)
T PRK15446 224 RARGIP---LASHDDDTPEHVAEAHALGVAIAEFPTTLEAARAA--RALGMSVLMGAPNVVRGGSHSGNVSALDLAAAGL 298 (383)
T ss_pred HHCCCc---eeecCCCCHHHHHHHHHcCCceeeCCCcHHHHHHH--HHCCCEEEeCCcccccCCcccchHhHHHHHHCCC
Confidence 899999 89999644 21 1111 1222 445 5688999888654333222223357889999999
Q ss_pred cEEEcCCCccccCCCCCChHHHHHHHHHHcCCCHHHHHHHH-HHHHHHcCCC
Q psy47 885 VVSLSTDDPLQFHFTKEPLMEEYSIAAQVWKLSSCDMCELA-RNSVLMSGFP 935 (1001)
Q Consensus 885 ~VsLsTDDPl~F~~T~t~L~eEY~iAa~~~~Ls~~DL~eLA-rNSV~~Sf~~ 935 (1001)
+++|+||... ..+...-..++...+++..++.+++ .|+.+.-+.+
T Consensus 299 ~~~lgSD~~p------~~~~~~~~~~~~~~gls~~~al~~~T~npA~~lgl~ 344 (383)
T PRK15446 299 LDILSSDYYP------ASLLDAAFRLADDGGLDLPQAVALVTANPARAAGLD 344 (383)
T ss_pred cEEEEcCCCh------hhHHHHHHHHHHhcCCCHHHHHHHHhHHHHHHcCCC
Confidence 9999999721 1233333344556789999986555 5888887774
No 69
>TIGR02318 phosphono_phnM phosphonate metabolism protein PhnM. This family consists of proteins from in the PhnM family. PhnM is a a protein associated with phosphonate utilization in a number of bacterial species. In Pseudomonas stutzeri WM88, a protein that is part of a system for the oxidation of phosphites (another form of reduced phosphorous compound) scores between trusted and noise cutoffs.
Probab=57.03 E-value=37 Score=39.49 Aligned_cols=111 Identities=15% Similarity=0.132 Sum_probs=70.5
Q ss_pred chhhhhhcCCCCccccCCCChhh----------hhccC---Ccc-hhhhHhccCceEEEEecCcccccc-ccccCCChHH
Q psy47 814 LNQSTGRRSRRETNLQPGAYKAD----------ALTSK---FPN-AQDIYDHEITIRIAMSPLSNNSLF-LNYHRNPLPE 878 (1001)
Q Consensus 814 LN~~Rr~~GL~t~~lt~HaGEaG----------~lLr~---~P~-LqyLyy~e~qIpLEvCPlSN~~l~-~~y~~HPf~~ 878 (1001)
+-.+-++.|++ +..|+.|.. +.... +.+ .+.+ .++|+.+.+|.- |...+ .....-++..
T Consensus 214 ~v~~A~~~G~~---v~sH~~~~~e~i~~a~~~Gv~~~E~~~t~e~a~~~--~~~G~~v~~~~p-~~~r~~~~~~~~~l~~ 287 (376)
T TIGR02318 214 IAALARARGIP---LASHDDDTPEHVAEAHDLGVTISEFPTTLEAAKEA--RSLGMQILMGAP-NIVRGGSHSGNLSARE 287 (376)
T ss_pred HHHHHHHCCCe---EEEecCCCHHHHHHHHHCCCChhccCCCHHHHHHH--HHcCCeEEECCc-cccccccccchHHHHH
Confidence 33344999999 899996541 11111 222 2566 678999888832 22211 1222347889
Q ss_pred HHHCCCcEEEcCCCccccCCCCCChHHHHHHHHHHcCCCHHHHHHHH-HHHHHHcCCC
Q psy47 879 YLARGLVVSLSTDDPLQFHFTKEPLMEEYSIAAQVWKLSSCDMCELA-RNSVLMSGFP 935 (1001)
Q Consensus 879 ~~~~Gl~VsLsTDDPl~F~~T~t~L~eEY~iAa~~~~Ls~~DL~eLA-rNSV~~Sf~~ 935 (1001)
+++.|+.++|+||+.. + ..+...+..+...-+++..++.+++ .|+.+..+++
T Consensus 288 ~~~~G~~~~l~SD~~p--~---~~l~~~~~~~~~~~gl~~~~al~~~T~npA~~lgl~ 340 (376)
T TIGR02318 288 LAHEGLLDVLASDYVP--A---SLLLAAFQLADDVEGIPLPQAVKMVTKNPARAVGLS 340 (376)
T ss_pred HHHCCCcEEEEcCCCc--H---HHHHHHHHHHHhhcCCCHHHHHHHHhHHHHHHcCCC
Confidence 9999999999999932 2 3444445544444478988887655 5888888875
No 70
>PRK12394 putative metallo-dependent hydrolase; Provisional
Probab=52.58 E-value=85 Score=36.24 Aligned_cols=116 Identities=11% Similarity=0.011 Sum_probs=71.6
Q ss_pred chhHHHHHHHHHhhhchhhhhhcCCCCccccCCCChhh--------hh------c-----------cCCcc----hhhhH
Q psy47 799 CYAYYQYYTYANLTVLNQSTGRRSRRETNLQPGAYKAD--------AL------T-----------SKFPN----AQDIY 849 (1001)
Q Consensus 799 p~~y~~~y~~ANi~~LN~~Rr~~GL~t~~lt~HaGEaG--------~l------L-----------r~~P~----LqyLy 849 (1001)
+..+......| ++.|+. +..|++|.+ .+ . ..++. +..+
T Consensus 172 ~~~l~~~~~~A---------~~~g~~---v~iH~~e~~~~~~~~~~~l~~g~~~~H~~~~~~~~~~~~~~~~~~~~~~~- 238 (379)
T PRK12394 172 LKPLTETLRIA---------NDLRCP---VAVHSTHPVLPMKELVSLLRRGDIIAHAFHGKGSTILTEEGAVLAEVRQA- 238 (379)
T ss_pred hHHHHHHHHHH---------HHcCCC---EEEEeCCCCccHHHHHHhcCCCCEEEecCCCCCCCcCCCCCCChHHHHHH-
Confidence 44566666777 788988 999998863 10 0 01111 1234
Q ss_pred hccCceEE-EEecCccccccccccCCChHHHHHCCC-cEEEcCCCccccCCCC--CChHHHHHHHHHHcCCCHHHHHHHH
Q psy47 850 DHEITIRI-AMSPLSNNSLFLNYHRNPLPEYLARGL-VVSLSTDDPLQFHFTK--EPLMEEYSIAAQVWKLSSCDMCELA 925 (1001)
Q Consensus 850 y~e~qIpL-EvCPlSN~~l~~~y~~HPf~~~~~~Gl-~VsLsTDDPl~F~~T~--t~L~eEY~iAa~~~~Ls~~DL~eLA 925 (1001)
+++++.+ .-||.||..+.+ ..+++++|+ +++|+||++.-..... ..|......+. ..+++..++.++|
T Consensus 239 -~~~G~~~~~~~g~s~~~~~~------~~~~l~~G~~~~~lgTD~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~a 310 (379)
T PRK12394 239 -RERGVIFDAANGRSHFDMNV------ARRAIANGFLPDIISSDLSTITKLAWPVYSLPWVLSKYL-ALGMALEDVINAC 310 (379)
T ss_pred -HhCCeEEEecCCccccchHH------HHHHHHCCCCceEEECCCCCCCcccCccchHHHHHHHHH-HcCCCHHHHHHHH
Confidence 5677766 667777653222 238899996 9999999987321000 12333333333 4689999988775
Q ss_pred -HHHHHHcCCC
Q psy47 926 -RNSVLMSGFP 935 (1001)
Q Consensus 926 -rNSV~~Sf~~ 935 (1001)
.|+...-+++
T Consensus 311 t~~~a~~~g~~ 321 (379)
T PRK12394 311 THTPAVLMGMA 321 (379)
T ss_pred HHHHHHHhCCC
Confidence 5888887765
No 71
>COG1574 Predicted metal-dependent hydrolase with the TIM-barrel fold [General function prediction only]
Probab=52.33 E-value=52 Score=40.51 Aligned_cols=108 Identities=17% Similarity=0.196 Sum_probs=72.2
Q ss_pred hhcCCCCccccCCC-Chhh---hh----------------cc------CCcch-hhhHhccCceEEEEecCcccc-----
Q psy47 819 GRRSRRETNLQPGA-YKAD---AL----------------TS------KFPNA-QDIYDHEITIRIAMSPLSNNS----- 866 (1001)
Q Consensus 819 r~~GL~t~~lt~Ha-GEaG---~l----------------Lr------~~P~L-qyLyy~e~qIpLEvCPlSN~~----- 866 (1001)
.++|+. +.+|| |+.+ +| +| .+|.. +++ ++.+|.+.|.|.==..
T Consensus 331 ~~~gl~---v~vHAiGD~Av~~~LdafE~~~~~~~~~~~r~rieH~~~v~~~~i~R~--~~Lgv~~svQP~f~~~~~~~~ 405 (535)
T COG1574 331 DERGLP---VAVHAIGDGAVDAALDAFEKARKKNGLKGLRHRIEHAELVSPDQIERF--AKLGVIASVQPNFLFSDGEWY 405 (535)
T ss_pred HHCCCc---EEEEEechHHHHHHHHHHHHHhhhcCCccCCceeeeeeecCHhHHHHH--HhcCceEeeccccccccchHH
Confidence 889999 99999 7753 11 11 13443 677 7778888888732111
Q ss_pred ---ccc--cccCCChHHHHHCCCcEEEcCCCccccCCCCCChHHHHHHHH-H---------HcCCCHHHH-HHHHHHHHH
Q psy47 867 ---LFL--NYHRNPLPEYLARGLVVSLSTDDPLQFHFTKEPLMEEYSIAA-Q---------VWKLSSCDM-CELARNSVL 930 (1001)
Q Consensus 867 ---l~~--~y~~HPf~~~~~~Gl~VsLsTDDPl~F~~T~t~L~eEY~iAa-~---------~~~Ls~~DL-~eLArNSV~ 930 (1001)
++- .....||+.|+++|++|+.+||.|..-- .|+..=|+.+. + ...||..+. +-..+||-.
T Consensus 406 ~~rlG~~r~~~~~p~~~ll~~G~~la~gSD~Pv~~~---dP~~~i~~AVtr~~~~g~~~~~~~~L~~~eAL~~yT~~~A~ 482 (535)
T COG1574 406 VDRLGEERASRSYPFRSLLKAGVPLAGGSDAPVEPY---DPWLGIYAAVTRKTPGGRVLGPEERLTREEALRAYTEGGAY 482 (535)
T ss_pred HHhhhhhhhhccCcHHHHHHCCCeEeccCCCCCCCC---ChHHHHHHHHcCCCCCCCCCccccccCHHHHHHHHhhhhHH
Confidence 111 3456799999999999999999999433 67766554444 1 125777775 455678888
Q ss_pred HcCC
Q psy47 931 MSGF 934 (1001)
Q Consensus 931 ~Sf~ 934 (1001)
++|.
T Consensus 483 a~~~ 486 (535)
T COG1574 483 ASGA 486 (535)
T ss_pred hhhc
Confidence 7776
No 72
>PF13147 Amidohydro_4: Amidohydrolase; PDB: 3SFW_B 2FTW_A 2PUZ_B 2GOK_B 3HM7_E 3D6N_A 1XRT_A 1XRF_A 1YNY_B 1K1D_F ....
Probab=43.21 E-value=39 Score=35.42 Aligned_cols=80 Identities=25% Similarity=0.210 Sum_probs=51.8
Q ss_pred ceEEEEecCccccccccccCCChHHHHHCCCcEEEcCCCccccCCCCCChHHHHHHHHHHcCCCHHHHHHHH-HHHHHHc
Q psy47 854 TIRIAMSPLSNNSLFLNYHRNPLPEYLARGLVVSLSTDDPLQFHFTKEPLMEEYSIAAQVWKLSSCDMCELA-RNSVLMS 932 (1001)
Q Consensus 854 qIpLEvCPlSN~~l~~~y~~HPf~~~~~~Gl~VsLsTDDPl~F~~T~t~L~eEY~iAa~~~~Ls~~DL~eLA-rNSV~~S 932 (1001)
++.+.++|-.+.. ..-...+...+++.|++|+|+||.+.........+..+...++..+|++..+..+++ .|..+.-
T Consensus 209 ~~~~~~~p~~~~~--~~~~~~~~~~l~~~Gv~~~l~sD~~~~~~~~~~~~~~~~~~~~~~~gl~~~~al~~~T~~pA~~l 286 (304)
T PF13147_consen 209 GIRFKVLPPLRLD--LREDRAALRELLEAGVPVALGSDHAPSSTEGSGDLLHEAMRLAVRAGLSPEEALRAATSNPARIL 286 (304)
T ss_dssp GGGGEESSCHHHH--THHHHHHHHHHHHTTSSEEEEE-BBTTTTTCTTTHHHHHHHHHHHTSSTHHHHHHHHTHHHHHHT
T ss_pred CceeeeCCCcccc--chhhhHHHHHHHhCCCeEEEEcCCcccccccccccchhhhhHHhhcCCCHHHHHHHHHHHHHHHh
Confidence 4556666655432 222234677999999999999999985220114555555555556999999886665 4777766
Q ss_pred CCC
Q psy47 933 GFP 935 (1001)
Q Consensus 933 f~~ 935 (1001)
+++
T Consensus 287 gl~ 289 (304)
T PF13147_consen 287 GLD 289 (304)
T ss_dssp TBT
T ss_pred CCC
Confidence 654
No 73
>PF05871 ESCRT-II: ESCRT-II complex subunit; InterPro: IPR008570 This entry represents the vps25 subunit (vacuolar protein sorting-associated protein 25) of the endosome-associated complex ESCRT-II (Endosomal Sorting Complexes Required for Transport protein II). ESCRT (ESCRT-I, -II, -III) complexes orchestrate efficient sorting of ubiquitinated transmembrane receptors to lysosomes via multivesicular bodies (MVBs) []. ESCRT-II recruits the transport machinery for protein sorting at MVB []. In addition, the human ESCRT-II has been shown to form a complex with RNA polymerase II elongation factor ELL in order to exert transcriptional control activity. ESCRT-II transiently associates with the endosomal membrane and thereby initiates the formation of ESCRT-III, a membrane-associated protein complex that functions immediately downstream of ESCRT-II during sorting of MVB cargo. ESCRT-II in turn functions downstream of ESCRT-I, a protein complex that binds to ubiquitinated endosomal cargo []. ESCRT-II is a trilobal complex composed of two copies of vps25, one copy of vps22 and the C-terminal region of vps36. The crystal structure of vps25 revealed two winged-helix domains, the N-terminal domain of vps25 interacting with vps22 and vps35 [].; PDB: 1W7P_B 1U5T_D 1XB4_D 3HTU_E 3CUQ_C 2ZME_D.
Probab=38.06 E-value=51 Score=33.71 Aligned_cols=49 Identities=24% Similarity=0.501 Sum_probs=36.2
Q ss_pred CCcchHHHHHHHHHHhhhhhcccccee------eeeeecCChhHHHH-HhhhHhhCcc
Q psy47 357 LGGTYFARIIKEVAADLEESKYQNAEL------RLSIYGKSEDEWDK-LATWAIESNV 407 (1001)
Q Consensus 357 i~G~y~Ae~~k~v~~~le~skyq~~e~------r~siyg~~~~eW~~-la~W~~~~~~ 407 (1001)
|+-+==.|.+++|++.|.+.. .||| |..||=|+++||.. +-+|+.++|+
T Consensus 57 I~R~L~~e~~~~Il~~Lv~~g--~aew~~~~~~~~~I~Wrt~~eWa~~I~~Wv~~~G~ 112 (139)
T PF05871_consen 57 INRRLSPEFIREILDELVQKG--NAEWIDKSKTRCLIYWRTPEEWADLIYDWVESTGQ 112 (139)
T ss_dssp TTEE--HHHHHHHHHHHHCTT--SEEECSTTSCEEEE-SS-HHHHHHHHHHHHHCCTT
T ss_pred ccCCCCHHHHHHHHHHHHhcC--CeEEeeCCCCEEEEEeCCHHHHHHHHHHHHHhCCC
Confidence 555555667899999998885 6666 67899999999964 6899999984
No 74
>cd08538 SAM_PNT-ESE-2-like Sterile alpha motif (SAM)/Pointed domain of ESE-2 like ETS transcriptional regulators. SAM Pointed domain of ESE-2-like (Epithelium-Specific ETS) subfamily of ETS transcriptional regulators is a putative protein-protein interaction domain. It can act as a major transactivator by providing a potential docking site for co-activators. ESE-2 factors are involved in regulation of gene expression in a variety of epithelial (glandular and secretory) cells. ESE-2 mRNA was found in skin keratinocytes, salivary gland, mammary gland, stomach, prostate, and kidneys. The DNA binding consensus motif for ESE-2 consists of a GGA core and AT-rich flanks. The expression profiles of these factors are altered in epithelial cancers. Members of this subfamily are potential targets for cancer therapy.
Probab=31.71 E-value=30 Score=32.25 Aligned_cols=47 Identities=19% Similarity=0.188 Sum_probs=40.1
Q ss_pred cCCceeeeeccccCCCCChhhHHHHHHHHHHHHHHHHHHHHHhcCCC
Q psy47 112 VPHFQRVAISGEDNTGVPAEDLEQASRLLVEALHIRDRYMDISSQTF 158 (1001)
Q Consensus 112 ~~~fQRV~IsGe~~~GVpleDL~~Aak~L~~AL~iRekYM~~s~q~F 158 (1001)
..+|++-.|+|.+.|.++-||+.++|-..=+-|.-.=.+.+.++|+|
T Consensus 32 ~i~~~~f~m~Gk~LC~ms~eeF~~~~p~~GdvLy~~lq~~~~~~~~~ 78 (78)
T cd08538 32 CISFCHFNISGLQLCSMTQEEFIEAAGICGEYLYFILQNIRTQGYSF 78 (78)
T ss_pred ccchhhcCCCHHHHHcCCHHHHHHHcccchHHHHHHHHHHHhcCccC
Confidence 36899999999999999999999999876666666667888888877
No 75
>PF05871 ESCRT-II: ESCRT-II complex subunit; InterPro: IPR008570 This entry represents the vps25 subunit (vacuolar protein sorting-associated protein 25) of the endosome-associated complex ESCRT-II (Endosomal Sorting Complexes Required for Transport protein II). ESCRT (ESCRT-I, -II, -III) complexes orchestrate efficient sorting of ubiquitinated transmembrane receptors to lysosomes via multivesicular bodies (MVBs) []. ESCRT-II recruits the transport machinery for protein sorting at MVB []. In addition, the human ESCRT-II has been shown to form a complex with RNA polymerase II elongation factor ELL in order to exert transcriptional control activity. ESCRT-II transiently associates with the endosomal membrane and thereby initiates the formation of ESCRT-III, a membrane-associated protein complex that functions immediately downstream of ESCRT-II during sorting of MVB cargo. ESCRT-II in turn functions downstream of ESCRT-I, a protein complex that binds to ubiquitinated endosomal cargo []. ESCRT-II is a trilobal complex composed of two copies of vps25, one copy of vps22 and the C-terminal region of vps36. The crystal structure of vps25 revealed two winged-helix domains, the N-terminal domain of vps25 interacting with vps22 and vps35 [].; PDB: 1W7P_B 1U5T_D 1XB4_D 3HTU_E 3CUQ_C 2ZME_D.
Probab=31.67 E-value=87 Score=32.10 Aligned_cols=45 Identities=27% Similarity=0.511 Sum_probs=31.5
Q ss_pred HHHHHHHHHHHHHHcccceEEE------EEeccCCChhHHH-HHHHHHHHhCcc
Q psy47 662 FARIIKEVAADLEESKYQNAEL------RLSIYGKSEDEWD-KLATWAIESNVY 708 (1001)
Q Consensus 662 fa~iikEvi~dle~~k~qYaEl------R~siyG~s~~ew~-~la~w~~~~~l~ 708 (1001)
=.+.+++|++.|.+.| .||+ ++-+|-++++||. .|.+|+...|+.
T Consensus 62 ~~e~~~~Il~~Lv~~g--~aew~~~~~~~~~I~Wrt~~eWa~~I~~Wv~~~G~~ 113 (139)
T PF05871_consen 62 SPEFIREILDELVQKG--NAEWIDKSKTRCLIYWRTPEEWADLIYDWVESTGQL 113 (139)
T ss_dssp -HHHHHHHHHHHHCTT--SEEECSTTSCEEEE-SS-HHHHHHHHHHHHHCCTTT
T ss_pred CHHHHHHHHHHHHhcC--CeEEeeCCCCEEEEEeCCHHHHHHHHHHHHHhCCCC
Confidence 3445666777788887 5666 4567889999995 588999988764
No 76
>PF10516 SHNi-TPR: SHNi-TPR; InterPro: IPR019544 The tetratrico peptide repeat region (TPR) is a structural motif present in a wide range of proteins [, , ]. It mediates protein-protein interactions and the assembly of multiprotein complexes []. The TPR motif consists of 3-16 tandem-repeats of 34 amino acids residues, although individual TPR motifs can be dispersed in the protein sequence. Sequence alignment of the TPR domains reveals a consensus sequence defined by a pattern of small and large amino acids. TPR motifs have been identified in various different organisms, ranging from bacteria to humans. Proteins containing TPRs are involved in a variety of biological processes, such as cell cycle regulation, transcriptional control, mitochondrial and peroxisomal protein transport, neurogenesis and protein folding. The X-ray structure of a domain containing three TPRs from protein phosphatase 5 revealed that TPR adopts a helix-turn-helix arrangement, with adjacent TPR motifs packing in a parallel fashion, resulting in a spiral of repeating anti-parallel alpha-helices []. The two helices are denoted helix A and helix B. The packing angle between helix A and helix B is ~24 degrees within a single TPR and generates a right-handed superhelical shape. Helix A interacts with helix B and with helix A' of the next TPR. Two protein surfaces are generated: the inner concave surface is contributed to mainly by residue on helices A, and the other surface presents residues from both helices A and B. This entry represents SHNi-TPR (Sim3-Hif1-NASP interrupted TPR), a sequence that is an interrupted form of TPR repeat [].
Probab=29.56 E-value=52 Score=26.57 Aligned_cols=22 Identities=32% Similarity=0.430 Sum_probs=20.0
Q ss_pred hhhHHHHHHHHHHHHHHHHHHH
Q psy47 130 AEDLEQASRLLVEALHIRDRYM 151 (1001)
Q Consensus 130 leDL~~Aak~L~~AL~iRekYM 151 (1001)
-|.+.+|..-+.+||.||++++
T Consensus 14 ~e~f~qA~~D~~~aL~i~~~l~ 35 (38)
T PF10516_consen 14 NENFEQAIEDYEKALEIQEELL 35 (38)
T ss_pred hccHHHHHHHHHHHHHHHHHhc
Confidence 4689999999999999999986
No 77
>TIGR00010 hydrolase, TatD family. Several genomes have multiple paralogs related to this family. However, a set of 17 proteins can be found, one each from 17 of the first 20 genomes, such that each member forms a bidirectional best hit across genomes with all other members of the set. This core set (and one other near-perfect member), but not the other paralogs, form the seed for this model. Additionally, members of the seed alignment and all trusted hits, but not all paralogs, have a conserved motif DxHxH near the amino end. The member from E. coli was recently shown to have DNase activity.
Probab=28.71 E-value=2.1e+02 Score=30.28 Aligned_cols=111 Identities=12% Similarity=0.120 Sum_probs=65.3
Q ss_pred hHHHHHHHHHhhhchhhhhhcCCCCccccCCCChhh-----hh----------cc---CCcch-hhhHhccCceEEEEec
Q psy47 801 AYYQYYTYANLTVLNQSTGRRSRRETNLQPGAYKAD-----AL----------TS---KFPNA-QDIYDHEITIRIAMSP 861 (1001)
Q Consensus 801 ~y~~~y~~ANi~~LN~~Rr~~GL~t~~lt~HaGEaG-----~l----------Lr---~~P~L-qyLyy~e~qIpLEvCP 861 (1001)
.+...+..| ++.|+. +..||+.++ ++ .. .++.. +.+ ++.|+-+.++.
T Consensus 109 ~~~~~~~~a---------~~~~~p---v~iH~~~~~~~~~~~l~~~~~~~~~i~H~~~~~~~~~~~~--~~~g~~~~~~~ 174 (252)
T TIGR00010 109 VFRAQLQLA---------EELNLP---VIIHARDAEEDVLDILREEKPKVGGVLHCFTGDAELAKKL--LDLGFYISISG 174 (252)
T ss_pred HHHHHHHHH---------HHhCCC---eEEEecCccHHHHHHHHhcCCCCCEEEEccCCCHHHHHHH--HHCCCeEeece
Confidence 455556666 788888 999998663 11 00 12233 334 45788888886
Q ss_pred CccccccccccCC-ChHHHHHCC--CcEEEcCCCcccc--CC-----CCCChHHHHHHHHHHcCCCHHHHHHHH-HHHHH
Q psy47 862 LSNNSLFLNYHRN-PLPEYLARG--LVVSLSTDDPLQF--HF-----TKEPLMEEYSIAAQVWKLSSCDMCELA-RNSVL 930 (1001)
Q Consensus 862 lSN~~l~~~y~~H-Pf~~~~~~G--l~VsLsTDDPl~F--~~-----T~t~L~eEY~iAa~~~~Ls~~DL~eLA-rNSV~ 930 (1001)
.++. ..- -+.++++.+ =++.++||.|.+- .+ .-..+..-+..++...|++.+++.++. +|+.+
T Consensus 175 ~~~~------~~~~~~~~~i~~~~~dril~~TD~p~~~~~~~~~~~~~p~~i~~~~~~~a~~~g~~~~~~~~~~~~N~~~ 248 (252)
T TIGR00010 175 IVTF------KNAKSLREVVRKIPLERLLVETDSPYLAPVPYRGKRNEPAFVRYTVEAIAEIKGMDVEELAQITTKNAKR 248 (252)
T ss_pred eEec------CCcHHHHHHHHhCCHHHeEecccCCCCCCCCCCCCCCCChhHHHHHHHHHHHhCcCHHHHHHHHHHHHHH
Confidence 3321 111 244566654 3799999998532 11 011233335556777799999998876 47655
Q ss_pred H
Q psy47 931 M 931 (1001)
Q Consensus 931 ~ 931 (1001)
.
T Consensus 249 ~ 249 (252)
T TIGR00010 249 L 249 (252)
T ss_pred H
Confidence 3
No 78
>cd01310 TatD_DNAse TatD like proteins; E.coli TatD is a cytoplasmic protein, shown to have magnesium dependent DNase activity.
Probab=22.77 E-value=4.3e+02 Score=27.83 Aligned_cols=111 Identities=18% Similarity=0.162 Sum_probs=65.3
Q ss_pred hHHHHHHHHHhhhchhhhhhcCCCCccccCCCChhh--h---h----------c---cCCc-chhhhHhccCceEEEEec
Q psy47 801 AYYQYYTYANLTVLNQSTGRRSRRETNLQPGAYKAD--A---L----------T---SKFP-NAQDIYDHEITIRIAMSP 861 (1001)
Q Consensus 801 ~y~~~y~~ANi~~LN~~Rr~~GL~t~~lt~HaGEaG--~---l----------L---r~~P-~LqyLyy~e~qIpLEvCP 861 (1001)
.|...+..| ++.|++ +.+|||... + + . ..++ .++.+ ++.|+.+.+++
T Consensus 109 ~~~~~~~~a---------~e~~~p---v~iH~~~~~~~~~~l~~~~~~~~~~i~H~~~~~~~~~~~~--~~~g~~~~~~~ 174 (251)
T cd01310 109 VFRAQLELA---------KELNLP---VVIHSRDAHEDVLEILKEYGPPKRGVFHCFSGSAEEAKEL--LDLGFYISISG 174 (251)
T ss_pred HHHHHHHHH---------HHhCCC---eEEEeeCchHHHHHHHHhcCCCCCEEEEccCCCHHHHHHH--HHcCCEEEeee
Confidence 355666777 888888 999998652 1 1 1 0133 33444 55788888887
Q ss_pred CccccccccccCCChHHHHHCC--CcEEEcCCCccccCC---C--CCC--hHHHHHHHHHHcCCCHHHHHHHH-HHHHH
Q psy47 862 LSNNSLFLNYHRNPLPEYLARG--LVVSLSTDDPLQFHF---T--KEP--LMEEYSIAAQVWKLSSCDMCELA-RNSVL 930 (1001)
Q Consensus 862 lSN~~l~~~y~~HPf~~~~~~G--l~VsLsTDDPl~F~~---T--~t~--L~eEY~iAa~~~~Ls~~DL~eLA-rNSV~ 930 (1001)
..+.. ...-+..+.+.+ -++.++||-|..-.. + ..| +..=+..++...|++.+++.++. .|+.+
T Consensus 175 ~~~~~-----~~~~~~~~~~~~~~dril~~TD~p~~~~~~~~~~~~~~~~~~~~~~~la~~~gl~~e~~~~~~~~N~~~ 248 (251)
T cd01310 175 IVTFK-----NANELREVVKEIPLERLLLETDSPYLAPVPFRGKRNEPAYVKHVAEKIAELKGISVEEVAEVTTENAKR 248 (251)
T ss_pred eeccC-----CCHHHHHHHHhCChHHEEEcccCCCCCCCCCCCCCCCChhHHHHHHHHHHHHCcCHHHHHHHHHHHHHH
Confidence 53211 111255565555 369999998864210 0 012 23334555667899999997754 46654
Done!