Query psy4702
Match_columns 138
No_of_seqs 104 out of 120
Neff 4.6
Searched_HMMs 29240
Date Fri Aug 16 23:42:16 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy4702.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/4702hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3now_A UNC-45 protein, SD10334 99.8 3.3E-19 1.1E-23 164.4 8.5 127 10-136 663-793 (810)
2 3opb_A SWI5-dependent HO expre 99.5 5.1E-15 1.7E-19 136.5 4.5 97 13-109 655-760 (778)
3 4db6_A Armadillo repeat protei 98.9 1.3E-08 4.3E-13 74.7 11.0 111 14-124 98-208 (210)
4 4hxt_A De novo protein OR329; 98.9 3.1E-08 1.1E-12 73.3 12.0 118 14-131 130-247 (252)
5 4hxt_A De novo protein OR329; 98.8 9.6E-08 3.3E-12 70.6 11.2 111 14-124 88-198 (252)
6 4db6_A Armadillo repeat protei 98.7 1.7E-07 5.7E-12 68.7 11.3 113 14-126 56-168 (210)
7 4db8_A Armadillo-repeat protei 98.7 8.4E-08 2.9E-12 72.0 8.3 111 14-124 140-250 (252)
8 4db8_A Armadillo-repeat protei 98.6 7.9E-07 2.7E-11 66.6 11.0 111 14-124 98-208 (252)
9 2jdq_A Importin alpha-1 subuni 98.4 1.8E-06 6.1E-11 69.2 9.0 113 14-126 278-391 (450)
10 2jdq_A Importin alpha-1 subuni 98.3 8.1E-06 2.8E-10 65.4 11.0 112 14-125 236-347 (450)
11 3tpo_A Importin subunit alpha- 98.3 4.9E-06 1.7E-10 70.6 10.1 112 14-125 337-449 (529)
12 2z6g_A B-catenin; FULL-length, 98.2 4.7E-06 1.6E-10 74.9 9.2 102 24-127 564-665 (780)
13 1xqr_A HSPBP1 protein; armadil 98.2 5.6E-06 1.9E-10 67.5 8.7 111 16-126 129-239 (296)
14 1jdh_A Beta-catenin; beta-cate 98.2 3.2E-06 1.1E-10 69.3 6.9 95 27-123 434-528 (529)
15 3ul1_B Importin subunit alpha- 98.2 8.2E-06 2.8E-10 69.3 9.5 112 15-126 319-431 (510)
16 1jdh_A Beta-catenin; beta-cate 98.1 1.3E-05 4.4E-10 65.7 9.4 104 19-123 67-170 (529)
17 2z6h_A Catenin beta-1, beta-ca 98.1 9.2E-06 3.1E-10 70.3 8.9 103 23-127 427-529 (644)
18 4b8j_A Importin subunit alpha- 98.1 7.6E-06 2.6E-10 68.2 7.7 113 14-126 330-444 (528)
19 1wa5_B Importin alpha subunit; 98.0 3.7E-05 1.3E-09 64.4 10.8 111 14-124 259-369 (530)
20 1wa5_B Importin alpha subunit; 98.0 3.6E-05 1.2E-09 64.5 10.5 112 15-126 302-413 (530)
21 4b8j_A Importin subunit alpha- 98.0 3.8E-05 1.3E-09 64.0 10.5 112 15-126 289-401 (528)
22 3ul1_B Importin subunit alpha- 98.0 5.2E-05 1.8E-09 64.3 11.4 110 16-125 105-219 (510)
23 3tpo_A Importin subunit alpha- 98.0 2.8E-05 9.6E-10 66.0 9.5 109 15-123 296-404 (529)
24 1xm9_A Plakophilin 1; armadill 98.0 2.4E-05 8.3E-10 65.7 8.4 109 17-125 7-116 (457)
25 2z6h_A Catenin beta-1, beta-ca 98.0 3.9E-05 1.3E-09 66.4 9.9 106 18-124 63-168 (644)
26 3tt9_A Plakophilin-2; cell adh 97.9 6.4E-05 2.2E-09 59.9 9.2 107 17-123 13-122 (233)
27 1xqr_A HSPBP1 protein; armadil 97.8 0.00019 6.4E-09 58.4 11.0 111 14-124 83-195 (296)
28 2z6g_A B-catenin; FULL-length, 97.8 8.1E-05 2.8E-09 66.9 9.2 104 19-123 200-303 (780)
29 3nmw_A APC variant protein; AR 97.8 0.00015 5E-09 60.3 10.1 100 27-126 233-335 (354)
30 3nmz_A APC variant protein; pr 97.7 0.00025 8.5E-09 61.3 10.1 101 27-127 349-452 (458)
31 3now_A UNC-45 protein, SD10334 97.7 0.00018 6.2E-09 66.6 9.8 105 19-124 385-523 (810)
32 3l6x_A Catenin delta-1; cateni 97.6 0.00034 1.1E-08 62.6 10.4 109 14-122 50-160 (584)
33 1xm9_A Plakophilin 1; armadill 97.4 0.00063 2.2E-08 57.1 9.1 91 14-106 46-137 (457)
34 3nmw_A APC variant protein; AR 97.4 0.0014 4.9E-08 54.3 10.9 105 20-124 179-291 (354)
35 3opb_A SWI5-dependent HO expre 97.4 0.00089 3E-08 62.1 10.1 112 15-127 609-730 (778)
36 3l6x_A Catenin delta-1; cateni 97.2 0.0014 4.7E-08 58.6 9.0 110 14-125 357-476 (584)
37 3nmz_A APC variant protein; pr 97.1 0.0032 1.1E-07 54.3 10.7 105 20-124 295-407 (458)
38 3tt9_A Plakophilin-2; cell adh 96.8 0.0026 8.9E-08 50.5 6.5 103 19-123 102-227 (233)
39 3ltj_A Alpharep-4; protein eng 96.1 0.021 7.1E-07 41.3 7.2 98 14-124 78-197 (201)
40 3ltm_A Alpha-REP4; protein eng 96.1 0.026 8.8E-07 41.1 7.6 99 14-125 83-203 (211)
41 1te4_A Conserved protein MTH18 95.5 0.031 1.1E-06 38.6 5.8 86 14-121 44-129 (131)
42 3ltj_A Alpharep-4; protein eng 94.9 0.16 5.6E-06 36.5 8.4 101 12-123 45-165 (201)
43 3ltm_A Alpha-REP4; protein eng 94.7 0.18 6.2E-06 36.5 8.3 99 12-123 50-170 (211)
44 1b3u_A Protein (protein phosph 94.7 0.21 7.1E-06 40.9 9.3 102 16-124 91-192 (588)
45 4gmo_A Putative uncharacterize 94.5 0.053 1.8E-06 48.1 5.9 83 22-106 44-129 (684)
46 1b3u_A Protein (protein phosph 94.3 0.19 6.4E-06 41.1 8.4 98 21-124 489-586 (588)
47 1oyz_A Hypothetical protein YI 93.7 0.28 9.7E-06 37.0 7.8 60 55-123 160-219 (280)
48 1oyz_A Hypothetical protein YI 93.0 0.37 1.3E-05 36.4 7.4 58 14-82 25-82 (280)
49 1te4_A Conserved protein MTH18 92.8 0.11 3.8E-06 35.7 3.9 85 16-123 16-100 (131)
50 3grl_A General vesicular trans 92.6 0.65 2.2E-05 42.4 9.6 114 12-125 122-241 (651)
51 3b2a_A TON_1937, putative unch 92.1 0.28 9.7E-06 40.5 6.0 78 53-131 32-110 (265)
52 3dad_A FH1/FH2 domain-containi 91.0 0.2 7E-06 42.4 4.2 66 65-130 129-199 (339)
53 4fdd_A Transportin-1; heat rep 90.6 1 3.4E-05 39.8 8.4 102 20-125 182-285 (852)
54 4fdd_A Transportin-1; heat rep 90.4 0.6 2E-05 41.2 6.8 105 20-125 367-471 (852)
55 2qk2_A LP04448P; mini spindles 90.3 0.66 2.3E-05 34.7 6.2 101 20-125 23-127 (242)
56 2qk2_A LP04448P; mini spindles 90.2 1.3 4.5E-05 33.0 7.7 99 17-124 103-204 (242)
57 3ebb_A Phospholipase A2-activa 89.7 0.82 2.8E-05 37.5 6.7 96 23-121 202-302 (304)
58 2vgl_B AP-2 complex subunit be 89.2 1.4 4.6E-05 37.9 8.0 94 22-125 96-189 (591)
59 1ibr_B P95, importin beta-1 su 89.2 0.3 1E-05 38.6 3.6 96 25-126 341-438 (462)
60 1qgr_A Protein (importin beta 86.8 1.9 6.6E-05 37.1 7.4 98 24-126 340-438 (876)
61 1ibr_B P95, importin beta-1 su 85.5 3 0.0001 32.7 7.5 108 18-125 179-288 (462)
62 2bpt_A Importin beta-1 subunit 85.4 3.6 0.00012 35.4 8.4 106 20-125 188-295 (861)
63 2vgl_B AP-2 complex subunit be 85.2 1.1 3.8E-05 38.4 5.1 64 19-85 128-191 (591)
64 3grl_A General vesicular trans 84.9 0.64 2.2E-05 42.5 3.6 88 18-106 172-264 (651)
65 1qgr_A Protein (importin beta 83.9 5.5 0.00019 34.3 8.9 106 19-124 180-287 (876)
66 4ady_A RPN2, 26S proteasome re 83.6 0.92 3.1E-05 43.1 4.2 98 12-124 577-675 (963)
67 2bpt_A Importin beta-1 subunit 81.5 5.7 0.0002 34.1 8.1 96 25-125 344-440 (861)
68 4gmo_A Putative uncharacterize 79.2 4.3 0.00015 35.8 6.8 70 53-124 34-104 (684)
69 2qk1_A Protein STU2; STU2P, XM 74.9 11 0.00038 28.9 7.3 97 26-124 118-219 (249)
70 3tjz_B Coatomer subunit gamma; 74.0 6.6 0.00023 32.8 6.2 67 22-93 149-215 (355)
71 1u6g_C TIP120 protein, CAND1; 69.2 8.4 0.00029 35.4 6.1 69 58-127 1010-1096(1230)
72 1u6g_C TIP120 protein, CAND1; 68.6 20 0.00068 32.9 8.5 98 22-125 58-163 (1230)
73 3b2a_A TON_1937, putative unch 64.1 16 0.00056 30.0 6.3 110 8-123 29-142 (265)
74 2qk1_A Protein STU2; STU2P, XM 60.0 13 0.00044 28.6 4.8 100 22-126 26-134 (249)
75 4ady_A RPN2, 26S proteasome re 58.6 16 0.00054 34.8 6.0 28 23-50 519-546 (963)
76 1w63_A Adapter-related protein 55.9 60 0.002 27.9 8.8 33 55-87 314-346 (618)
77 2vgl_A Adaptor protein complex 54.6 10 0.00035 33.1 3.8 62 22-87 158-220 (621)
78 1w63_A Adapter-related protein 47.9 90 0.0031 26.8 8.7 43 21-63 188-232 (618)
79 2vgl_A Adaptor protein complex 45.3 35 0.0012 29.7 5.7 89 24-122 123-213 (621)
80 1x5b_A Signal transducing adap 45.1 85 0.0029 23.0 7.1 63 45-107 38-106 (163)
81 1lrv_A LRV, leucine-rich repea 41.6 16 0.00053 28.7 2.6 20 16-35 126-145 (244)
82 3ldz_A STAM-1, signal transduc 36.8 1.1E+02 0.0038 21.7 7.2 74 45-118 28-107 (140)
83 2ysr_A DEP domain-containing p 33.7 25 0.00085 24.3 2.4 44 91-134 40-87 (105)
84 3zyq_A Hepatocyte growth facto 32.8 1.3E+02 0.0043 23.1 6.6 63 45-107 31-99 (226)
85 1dvp_A HRS, hepatocyte growth 32.8 1.3E+02 0.0043 22.7 6.5 62 46-107 29-96 (220)
86 2iw3_A Elongation factor 3A; a 29.8 2.7E+02 0.0093 26.4 9.4 105 15-125 98-204 (986)
87 1lrv_A LRV, leucine-rich repea 26.6 29 0.00099 27.1 1.9 59 16-74 54-118 (244)
88 2xvc_A ESCRT-III, SSO0910; cel 26.6 20 0.00069 23.2 0.8 45 84-130 11-56 (59)
89 4ffb_C Protein STU2; tubulin f 26.6 1E+02 0.0035 23.2 5.0 97 22-125 113-212 (278)
90 3l9t_A Putative uncharacterize 24.6 80 0.0027 25.3 4.2 57 10-70 136-194 (240)
91 3lys_A Prophage PI2 protein 01 23.3 1.5E+02 0.0051 18.8 4.8 44 92-135 51-98 (112)
92 3u0r_A Apoptosis inhibitor 5; 23.2 61 0.0021 28.8 3.5 46 16-68 69-114 (507)
93 3u5c_Z RP45, S31, YS23, 40S ri 21.6 32 0.0011 24.6 1.2 20 113-132 73-92 (108)
94 2i9c_A Hypothetical protein RP 21.2 88 0.003 22.7 3.5 65 55-131 58-122 (123)
95 2iw3_A Elongation factor 3A; a 20.9 2.5E+02 0.0086 26.6 7.3 66 58-124 255-323 (986)
96 3u0r_A Apoptosis inhibitor 5; 20.8 2.1E+02 0.0073 25.4 6.5 63 53-123 64-127 (507)
97 1juq_A ADP-ribosylation factor 20.8 2.5E+02 0.0087 20.6 6.9 62 45-106 36-103 (171)
98 2khv_A Phage integrase; soluti 20.7 1.6E+02 0.0055 18.4 4.4 42 93-134 48-93 (106)
No 1
>3now_A UNC-45 protein, SD10334P; armadillo repeat, HSP90, myosin, tetra-tricopeptide repeat, binding protein required for myosin function; 2.99A {Drosophila melanogaster}
Probab=99.77 E-value=3.3e-19 Score=164.39 Aligned_cols=127 Identities=43% Similarity=0.714 Sum_probs=114.8
Q ss_pred CCChhhhhhhhcCCCCHHHHHhhhhhhhhhccCCHHHHhhhhh-ccHHHHHHHHhcCCCcccchhhhhhhhhhhhcChHH
Q psy4702 10 YCSQVRFLFLLTCEEDTETACAAAGALAMLTSVSTPVCSMLLE-KNWVDIFKQILAHPDVGVQHRALVIVGNILSAGKEL 88 (138)
Q Consensus 10 ~n~RlklLvll~~eED~~tr~AA~GALAmLT~~~~~~c~~I~~-~~wleil~~L~~~~~~~lqHRG~viv~Nmi~a~~e~ 88 (138)
+++++++|+.|.+.+|..++++|+|||++||+.++..++.|++ .+|++.|..|+.++++++|||++.++.|+..++++.
T Consensus 663 ~~g~l~~Lv~LL~s~d~~vq~~Aa~ALanLt~~s~~~~~~ii~~~g~I~~Lv~LL~s~d~~vq~~A~~aL~NL~~~s~e~ 742 (810)
T 3now_A 663 NNDRVKFLALLCEDEDEETATACAGALAIITSVSVKCCEKILAIASWLDILHTLIANPSPAVQHRGIVIILNMINAGEEI 742 (810)
T ss_dssp SSSHHHHHHHGGGCSSHHHHHHHHHHHHHHHHHCHHHHHHHHTSTTHHHHHHHHHTCSSHHHHHHHHHHHHHHHTTCHHH
T ss_pred ccCcHHHHHHHhcCCCHHHHHHHHHHHHHHhCCCHHHHHHHHHHcCCHHHHHHHHCCCCHHHHHHHHHHHHHHHhCCHHH
Confidence 4689999999999999999999999999999866999999999 999999999999999999999999999999999999
Q ss_pred HHHHhhhhHHHHHHHhhccc--cH-HHHHHHHHHHHHHHhCCCccCCCCCC
Q psy4702 89 AERVLSTELMEILMALTLLE--GE-EVRKLALQALAKGEEYGIIRRPGEGE 136 (138)
Q Consensus 89 a~kl~es~~leiL~~~~k~~--~~-~v~~~a~eaLk~~~~~glIk~~~~~~ 136 (138)
++++++.|++++|..+.+.+ ++ ++++.|.+||+.+++||+|+|+++.+
T Consensus 743 ~~~l~e~G~i~~L~~LL~~~d~~~~~i~e~Al~aL~~ll~~g~~~~~~~~~ 793 (810)
T 3now_A 743 AKKLFETDIMELLSGLGQLPDDTRAKAREVATQCLAAAERYRIIERSDNAE 793 (810)
T ss_dssp HHHHHTSTHHHHHTTSCCCTTSTTHHHHHHHHHHHHHHHHHHTC-------
T ss_pred HHHHHHCCCHHHHHHHHhCcccCcHHHHHHHHHHHHHHHhCCCccCCCccc
Confidence 99999999999999999876 34 99999999999999999999998644
No 2
>3opb_A SWI5-dependent HO expression protein 4; heat and arm fold, myosin folding and function, myosin bindi protein, protein binding; 2.90A {Saccharomyces cerevisiae}
Probab=99.51 E-value=5.1e-15 Score=136.51 Aligned_cols=97 Identities=19% Similarity=0.211 Sum_probs=82.0
Q ss_pred hhhhhhhhcCCCCHHHHHhhhhhhhhhccCCHHHHhhhhh-ccHHHHHHHHhcC--CCcccchhhhhhhhhhhh-c----
Q psy4702 13 QVRFLFLLTCEEDTETACAAAGALAMLTSVSTPVCSMLLE-KNWVDIFKQILAH--PDVGVQHRALVIVGNILS-A---- 84 (138)
Q Consensus 13 RlklLvll~~eED~~tr~AA~GALAmLT~~~~~~c~~I~~-~~wleil~~L~~~--~~~~lqHRG~viv~Nmi~-a---- 84 (138)
|+|+|+.|++.+|+++|+||+||||+||+.+|.+|+.|++ ++|++.+.++|.+ +++++||||+++++||++ +
T Consensus 655 rL~lLV~Ll~s~D~~~r~AAagALAnLts~~~~ia~~ll~~~~gi~~Ll~lL~~~~~~~~l~~R~~~~l~NL~~~~~~~~ 734 (778)
T 3opb_A 655 NFNILVKLLQLSDVESQRAVAAIFANIATTIPLIAKELLTKKELIENAIQVFADQIDDIELRQRLLMLFFGLFEVIPDNG 734 (778)
T ss_dssp HHHHHHHGGGCSCHHHHHHHHHHHHHHHHHCHHHHHHHTTCHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTTCCSTT
T ss_pred cHHHHHHHHcCCCHHHHHHHHHHHHHhcCCChHHHHHHHHccccHHHHHHHHhccCCCHHHHHHHHHHHHHHHHhhccCC
Confidence 5999999999999999999999999997558999999999 8999999999999 999999999999999995 2
Q ss_pred ChHHHHHHh-hhhHHHHHHHhhcccc
Q psy4702 85 GKELAERVL-STELMEILMALTLLEG 109 (138)
Q Consensus 85 ~~e~a~kl~-es~~leiL~~~~k~~~ 109 (138)
+++.-.++. .+...+.|..+.|.++
T Consensus 735 ~~~~~~~~~~~~~l~~~l~~~lk~~~ 760 (778)
T 3opb_A 735 TNEVYPLLQENQKLKDALNMSLKRGD 760 (778)
T ss_dssp TTSCCHHHHSCHHHHHHHHHHHSSSS
T ss_pred ChHHHHHHhcChHHHHHHHHHHhCCC
Confidence 223334444 5667777777777643
No 3
>4db6_A Armadillo repeat protein; solenoid repeat, armadillo repeat motif, de novo protein; 1.80A {Synthetic construct} PDB: 4db9_A 4dba_A
Probab=98.92 E-value=1.3e-08 Score=74.75 Aligned_cols=111 Identities=24% Similarity=0.254 Sum_probs=99.0
Q ss_pred hhhhhhhcCCCCHHHHHhhhhhhhhhccCCHHHHhhhhhccHHHHHHHHhcCCCcccchhhhhhhhhhhhcChHHHHHHh
Q psy4702 14 VRFLFLLTCEEDTETACAAAGALAMLTSVSTPVCSMLLEKNWVDIFKQILAHPDVGVQHRALVIVGNILSAGKELAERVL 93 (138)
Q Consensus 14 lklLvll~~eED~~tr~AA~GALAmLT~~~~~~c~~I~~~~wleil~~L~~~~~~~lqHRG~viv~Nmi~a~~e~a~kl~ 93 (138)
+..++-+....|..++..|.++|..|+..++..+..+++..+++.|..++.++++++|..++.++.|+...+.+....+.
T Consensus 98 i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~ll~~~~~~v~~~a~~aL~~l~~~~~~~~~~~~ 177 (210)
T 4db6_A 98 LPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQKQAVK 177 (210)
T ss_dssp HHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHTSCHHHHHHHH
T ss_pred HHHHHHHHcCCcHHHHHHHHHHHHHHHcCCHHHHHHHHHcCcHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCcHHHHHHH
Confidence 45667777788999999999999999976788888888888999999999999999999999999999998888889999
Q ss_pred hhhHHHHHHHhhccccHHHHHHHHHHHHHHH
Q psy4702 94 STELMEILMALTLLEGEEVRKLALQALAKGE 124 (138)
Q Consensus 94 es~~leiL~~~~k~~~~~v~~~a~eaLk~~~ 124 (138)
+.|+++.|..+.+.+..++.+.|..+|..+.
T Consensus 178 ~~g~i~~L~~ll~~~~~~v~~~a~~aL~~l~ 208 (210)
T 4db6_A 178 EAGALEKLEQLQSHENEKIQKEAQEALEKLQ 208 (210)
T ss_dssp HTTHHHHHHHGGGCSCHHHHHHHHHHHHHHC
T ss_pred HCCCHHHHHHHHhCCCHHHHHHHHHHHHHHh
Confidence 9999999999988654589999999998764
No 4
>4hxt_A De novo protein OR329; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.95A {Artificial gene}
Probab=98.88 E-value=3.1e-08 Score=73.32 Aligned_cols=118 Identities=25% Similarity=0.273 Sum_probs=104.2
Q ss_pred hhhhhhhcCCCCHHHHHhhhhhhhhhccCCHHHHhhhhhccHHHHHHHHhcCCCcccchhhhhhhhhhhhcChHHHHHHh
Q psy4702 14 VRFLFLLTCEEDTETACAAAGALAMLTSVSTPVCSMLLEKNWVDIFKQILAHPDVGVQHRALVIVGNILSAGKELAERVL 93 (138)
Q Consensus 14 lklLvll~~eED~~tr~AA~GALAmLT~~~~~~c~~I~~~~wleil~~L~~~~~~~lqHRG~viv~Nmi~a~~e~a~kl~ 93 (138)
+..++-+...+|+.++..|.++|..|+..++.....+.+...++.|..++.++++++|..++.++.|+...+.+..+.++
T Consensus 130 i~~L~~~l~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~ll~~~~~~v~~~a~~~L~~l~~~~~~~~~~l~ 209 (252)
T 4hxt_A 130 VEVLVKLLTSTDSEVQKEAARALANIASGPDEAIKAIVDAGGVEVLVKLLTSTDSEVQKEAARALANIASGPTSAIKAIV 209 (252)
T ss_dssp HHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTTSBHHHHHHHH
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHCcCHHHHHHHHCCCCHHHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 56677777888999999999999999986677777777788999999999999999999999999999988888899999
Q ss_pred hhhHHHHHHHhhccccHHHHHHHHHHHHHHHhCCCccC
Q psy4702 94 STELMEILMALTLLEGEEVRKLALQALAKGEEYGIIRR 131 (138)
Q Consensus 94 es~~leiL~~~~k~~~~~v~~~a~eaLk~~~~~glIk~ 131 (138)
+.|+++.|..+.+.++.++++.|..+|..+.....-..
T Consensus 210 ~~~~i~~L~~ll~~~~~~v~~~a~~~L~~l~~~~~~~~ 247 (252)
T 4hxt_A 210 DAGGVEVLQKLLTSTDSEVQKEAQRALENIKSGGWLEH 247 (252)
T ss_dssp HTTHHHHHHHGGGCSCHHHHHHHHHHHHHHHHTCBCCC
T ss_pred HCCCHHHHHHHHCCCcHHHHHHHHHHHHHHHcCCCccc
Confidence 99999999999887655999999999999987665443
No 5
>4hxt_A De novo protein OR329; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.95A {Artificial gene}
Probab=98.76 E-value=9.6e-08 Score=70.65 Aligned_cols=111 Identities=28% Similarity=0.299 Sum_probs=97.7
Q ss_pred hhhhhhhcCCCCHHHHHhhhhhhhhhccCCHHHHhhhhhccHHHHHHHHhcCCCcccchhhhhhhhhhhhcChHHHHHHh
Q psy4702 14 VRFLFLLTCEEDTETACAAAGALAMLTSVSTPVCSMLLEKNWVDIFKQILAHPDVGVQHRALVIVGNILSAGKELAERVL 93 (138)
Q Consensus 14 lklLvll~~eED~~tr~AA~GALAmLT~~~~~~c~~I~~~~wleil~~L~~~~~~~lqHRG~viv~Nmi~a~~e~a~kl~ 93 (138)
+..++-+...+|..++..|.++|..|+..++..+..+.+...++.|..++.++++++|..++-++.|+...+.+..+.+.
T Consensus 88 i~~l~~ll~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~~l~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~ 167 (252)
T 4hxt_A 88 VEVLVKLLTSTDSEVQKEAARALANIASGPDEAIKAIVDAGGVEVLVKLLTSTDSEVQKEAARALANIASGPDEAIKAIV 167 (252)
T ss_dssp HHHHHHHTTCSSHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHHH
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHCCCHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 56667777788999999999999999954788888888888999999999999999999999999999988888889999
Q ss_pred hhhHHHHHHHhhccccHHHHHHHHHHHHHHH
Q psy4702 94 STELMEILMALTLLEGEEVRKLALQALAKGE 124 (138)
Q Consensus 94 es~~leiL~~~~k~~~~~v~~~a~eaLk~~~ 124 (138)
+.|++..|..+.+.++.+++..|..+|..+.
T Consensus 168 ~~~~i~~L~~ll~~~~~~v~~~a~~~L~~l~ 198 (252)
T 4hxt_A 168 DAGGVEVLVKLLTSTDSEVQKEAARALANIA 198 (252)
T ss_dssp HTTHHHHHHHHTTCSCHHHHHHHHHHHHHHT
T ss_pred HCcCHHHHHHHHCCCCHHHHHHHHHHHHHHH
Confidence 9999999999988655588888888887665
No 6
>4db6_A Armadillo repeat protein; solenoid repeat, armadillo repeat motif, de novo protein; 1.80A {Synthetic construct} PDB: 4db9_A 4dba_A
Probab=98.72 E-value=1.7e-07 Score=68.70 Aligned_cols=113 Identities=21% Similarity=0.218 Sum_probs=97.3
Q ss_pred hhhhhhhcCCCCHHHHHhhhhhhhhhccCCHHHHhhhhhccHHHHHHHHhcCCCcccchhhhhhhhhhhhcChHHHHHHh
Q psy4702 14 VRFLFLLTCEEDTETACAAAGALAMLTSVSTPVCSMLLEKNWVDIFKQILAHPDVGVQHRALVIVGNILSAGKELAERVL 93 (138)
Q Consensus 14 lklLvll~~eED~~tr~AA~GALAmLT~~~~~~c~~I~~~~wleil~~L~~~~~~~lqHRG~viv~Nmi~a~~e~a~kl~ 93 (138)
+..++-+-..+|...+..|..+|..|+..++.....+++...++.|..++.++++.+|..++.++.|+...+.+..+.++
T Consensus 56 i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~ 135 (210)
T 4db6_A 56 LPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAVI 135 (210)
T ss_dssp HHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTCHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHHH
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHhcCCcHHHHHHHHCCCHHHHHHHHcCCcHHHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 34455555667999999999999999964778888888888999999999999999999999999999998888888999
Q ss_pred hhhHHHHHHHhhccccHHHHHHHHHHHHHHHhC
Q psy4702 94 STELMEILMALTLLEGEEVRKLALQALAKGEEY 126 (138)
Q Consensus 94 es~~leiL~~~~k~~~~~v~~~a~eaLk~~~~~ 126 (138)
+.|++..|..+.+.++.++++.|..+|..+...
T Consensus 136 ~~~~i~~L~~ll~~~~~~v~~~a~~aL~~l~~~ 168 (210)
T 4db6_A 136 DAGALPALVQLLSSPNEQILQEALWALSNIASG 168 (210)
T ss_dssp HTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHTS
T ss_pred HcCcHHHHHHHHcCCCHHHHHHHHHHHHHHHcC
Confidence 999999999998876558888888888877654
No 7
>4db8_A Armadillo-repeat protein; solenoid repeat, de novo protein; 2.50A {Synthetic construct}
Probab=98.66 E-value=8.4e-08 Score=72.00 Aligned_cols=111 Identities=24% Similarity=0.254 Sum_probs=96.3
Q ss_pred hhhhhhhcCCCCHHHHHhhhhhhhhhccCCHHHHhhhhhccHHHHHHHHhcCCCcccchhhhhhhhhhhhcChHHHHHHh
Q psy4702 14 VRFLFLLTCEEDTETACAAAGALAMLTSVSTPVCSMLLEKNWVDIFKQILAHPDVGVQHRALVIVGNILSAGKELAERVL 93 (138)
Q Consensus 14 lklLvll~~eED~~tr~AA~GALAmLT~~~~~~c~~I~~~~wleil~~L~~~~~~~lqHRG~viv~Nmi~a~~e~a~kl~ 93 (138)
+..|+-+...+|..++..|.++|..|+..++.....+.+...++.|..++.++++.+|..++-++.|+...+.+..+.++
T Consensus 140 i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~ll~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~ 219 (252)
T 4db8_A 140 LPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQKQAVK 219 (252)
T ss_dssp HHHHHHGGGCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTCHHHHHHGGGCSSHHHHHHHHHHHHHHTTSCHHHHHHHH
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHcCChHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHhcCCHHHHHHHH
Confidence 45666666778999999999999999986667777777788999999999999999999999999999988888899999
Q ss_pred hhhHHHHHHHhhccccHHHHHHHHHHHHHHH
Q psy4702 94 STELMEILMALTLLEGEEVRKLALQALAKGE 124 (138)
Q Consensus 94 es~~leiL~~~~k~~~~~v~~~a~eaLk~~~ 124 (138)
+.|+++.|..+.+.++.++.+.|..+|..+.
T Consensus 220 ~~g~i~~L~~ll~~~~~~v~~~A~~~L~~l~ 250 (252)
T 4db8_A 220 EAGALEKLEQLQSHENEKIQKEAQEALEKLQ 250 (252)
T ss_dssp HTTHHHHHHTTTTCSSSHHHHTHHHHHHTTC
T ss_pred HCCcHHHHHHHhCCCCHHHHHHHHHHHHHHh
Confidence 9999999999987664488899988887553
No 8
>4db8_A Armadillo-repeat protein; solenoid repeat, de novo protein; 2.50A {Synthetic construct}
Probab=98.55 E-value=7.9e-07 Score=66.63 Aligned_cols=111 Identities=22% Similarity=0.234 Sum_probs=94.4
Q ss_pred hhhhhhhcCCCCHHHHHhhhhhhhhhccCCHHHHhhhhhccHHHHHHHHhcCCCcccchhhhhhhhhhhhcChHHHHHHh
Q psy4702 14 VRFLFLLTCEEDTETACAAAGALAMLTSVSTPVCSMLLEKNWVDIFKQILAHPDVGVQHRALVIVGNILSAGKELAERVL 93 (138)
Q Consensus 14 lklLvll~~eED~~tr~AA~GALAmLT~~~~~~c~~I~~~~wleil~~L~~~~~~~lqHRG~viv~Nmi~a~~e~a~kl~ 93 (138)
+..++-+-..+|..++..|.++|..|+..++..+..+.+...++.|..++.++++++|..++-++.|+...+.+..+.++
T Consensus 98 i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~ 177 (252)
T 4db8_A 98 LPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAVI 177 (252)
T ss_dssp HHHHHHGGGCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHGGGCSCHHHHHHHHHHHHHHTTSCHHHHHHHH
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHhhcCCchHHHHHHHCCCHHHHHHHHhCCCHHHHHHHHHHHHHHHcCChHHHHHHH
Confidence 45556666668999999999999999985444447777788999999999999999999999999999998888888999
Q ss_pred hhhHHHHHHHhhccccHHHHHHHHHHHHHHH
Q psy4702 94 STELMEILMALTLLEGEEVRKLALQALAKGE 124 (138)
Q Consensus 94 es~~leiL~~~~k~~~~~v~~~a~eaLk~~~ 124 (138)
+.|++..|..+.+.++.++++.|..+|..+.
T Consensus 178 ~~~~i~~L~~ll~~~~~~v~~~a~~~L~~l~ 208 (252)
T 4db8_A 178 DAGALPALVQLLSSPNEQILQEALWALSNIA 208 (252)
T ss_dssp HTTCHHHHHHGGGCSSHHHHHHHHHHHHHHT
T ss_pred HCCCHHHHHHHHCCCCHHHHHHHHHHHHHHh
Confidence 9999999999988765588888888887664
No 9
>2jdq_A Importin alpha-1 subunit; transport, PB2 subunit, nuclear protein, protein transport, armadillo repeats; 2.2A {Homo sapiens} PDB: 3tj3_A
Probab=98.35 E-value=1.8e-06 Score=69.19 Aligned_cols=113 Identities=14% Similarity=0.142 Sum_probs=95.5
Q ss_pred hhhhhhhcCCCCHHHHHhhhhhhhhhccCCHHHHhhhhhccHHHHHHHHhcCCCcccchhhhhhhhhhhhc-ChHHHHHH
Q psy4702 14 VRFLFLLTCEEDTETACAAAGALAMLTSVSTPVCSMLLEKNWVDIFKQILAHPDVGVQHRALVIVGNILSA-GKELAERV 92 (138)
Q Consensus 14 lklLvll~~eED~~tr~AA~GALAmLT~~~~~~c~~I~~~~wleil~~L~~~~~~~lqHRG~viv~Nmi~a-~~e~a~kl 92 (138)
+..++-+....|..+|.+|..+|..++..++..++.+++...++.|..++.++++++|..++.++.|+... +.+..+.+
T Consensus 278 l~~L~~ll~~~~~~vr~~a~~~L~~l~~~~~~~~~~~~~~~~l~~L~~~l~~~~~~v~~~a~~~L~~l~~~~~~~~~~~l 357 (450)
T 2jdq_A 278 LQSLLHLLSSPKESIKKEACWTISNITAGNRAQIQTVIDANIFPALISILQTAEFRTRKEAAWAITNATSGGSAEQIKYL 357 (450)
T ss_dssp HHHHHHHTTCSSHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHCCHHHHHHH
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHCCCHHHHHHHHhcCCHHHHHHHHHHHHHHHcCCCHHHHHHH
Confidence 34455556667899999999999999965688888888777999999999999999999999999999875 67778889
Q ss_pred hhhhHHHHHHHhhccccHHHHHHHHHHHHHHHhC
Q psy4702 93 LSTELMEILMALTLLEGEEVRKLALQALAKGEEY 126 (138)
Q Consensus 93 ~es~~leiL~~~~k~~~~~v~~~a~eaLk~~~~~ 126 (138)
++.+++..|..+.+.++.++++.|..+|..+...
T Consensus 358 ~~~~~i~~L~~ll~~~~~~v~~~a~~aL~~l~~~ 391 (450)
T 2jdq_A 358 VELGCIKPLCDLLTVMDSKIVQVALNGLENILRL 391 (450)
T ss_dssp HHHTCHHHHHHGGGSSCHHHHHHHHHHHHHHHHH
T ss_pred HHCCCHHHHHHHhcCCCHHHHHHHHHHHHHHHHh
Confidence 9999999999998876458888888888777653
No 10
>2jdq_A Importin alpha-1 subunit; transport, PB2 subunit, nuclear protein, protein transport, armadillo repeats; 2.2A {Homo sapiens} PDB: 3tj3_A
Probab=98.27 E-value=8.1e-06 Score=65.36 Aligned_cols=112 Identities=16% Similarity=0.214 Sum_probs=93.9
Q ss_pred hhhhhhhcCCCCHHHHHhhhhhhhhhccCCHHHHhhhhhccHHHHHHHHhcCCCcccchhhhhhhhhhhhcChHHHHHHh
Q psy4702 14 VRFLFLLTCEEDTETACAAAGALAMLTSVSTPVCSMLLEKNWVDIFKQILAHPDVGVQHRALVIVGNILSAGKELAERVL 93 (138)
Q Consensus 14 lklLvll~~eED~~tr~AA~GALAmLT~~~~~~c~~I~~~~wleil~~L~~~~~~~lqHRG~viv~Nmi~a~~e~a~kl~ 93 (138)
+..++-+...+|..++.+|..+|..|+..++..++.+++...++.|..++.++++.+|+.++-++.|+...+.+..+.++
T Consensus 236 i~~L~~ll~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~l~~L~~ll~~~~~~vr~~a~~~L~~l~~~~~~~~~~~~ 315 (450)
T 2jdq_A 236 CRRLVELLMHNDYKVVSPALRAVGNIVTGDDIQTQVILNCSALQSLLHLLSSPKESIKKEACWTISNITAGNRAQIQTVI 315 (450)
T ss_dssp HHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHTTTHHHHHHHHTTCSSHHHHHHHHHHHHHHTTSCHHHHHHHH
T ss_pred HHHHHHHHCCCchhHHHHHHHHHHHHhhCChHHHHHHHHCccHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 34455555678899999999999999986677777777777999999999999999999999999999988888888899
Q ss_pred hhhHHHHHHHhhccccHHHHHHHHHHHHHHHh
Q psy4702 94 STELMEILMALTLLEGEEVRKLALQALAKGEE 125 (138)
Q Consensus 94 es~~leiL~~~~k~~~~~v~~~a~eaLk~~~~ 125 (138)
+.+++..|..+.+.++.+++..|..+|..+..
T Consensus 316 ~~~~l~~L~~~l~~~~~~v~~~a~~~L~~l~~ 347 (450)
T 2jdq_A 316 DANIFPALISILQTAEFRTRKEAAWAITNATS 347 (450)
T ss_dssp HTTHHHHHHHHHHHSCHHHHHHHHHHHHHHHH
T ss_pred HCCCHHHHHHHHhcCCHHHHHHHHHHHHHHHc
Confidence 99999999999876544777777777766643
No 11
>3tpo_A Importin subunit alpha-2; nuclear import, protein transport; 2.10A {Mus musculus} PDB: 1qgk_B 1qgr_B
Probab=98.26 E-value=4.9e-06 Score=70.65 Aligned_cols=112 Identities=16% Similarity=0.149 Sum_probs=96.7
Q ss_pred hhhhhhhcCCCCHHHHHhhhhhhhhhccCCHHHHhhhhhccHHHHHHHHhcCCCcccchhhhhhhhhhhh-cChHHHHHH
Q psy4702 14 VRFLFLLTCEEDTETACAAAGALAMLTSVSTPVCSMLLEKNWVDIFKQILAHPDVGVQHRALVIVGNILS-AGKELAERV 92 (138)
Q Consensus 14 lklLvll~~eED~~tr~AA~GALAmLT~~~~~~c~~I~~~~wleil~~L~~~~~~~lqHRG~viv~Nmi~-a~~e~a~kl 92 (138)
+..|+-|....+...+..|+++|..||+.++..+..+.+...++.|..++.+++.++|+-++.++.|+.. ++.+....+
T Consensus 337 l~~L~~LL~~~~~~i~~~a~~aL~nl~~~~~~~~~~v~~~g~i~~Lv~lL~~~~~~v~~~A~~aL~nl~~~~~~~~~~~l 416 (529)
T 3tpo_A 337 LAVFPSLLTNPKTNIQKEATWTMSNITAGRQDQIQQVVNHGLVPFLVGVLSKADFKTQKAAAWAITNYTSGGTVEQIVYL 416 (529)
T ss_dssp GGGHHHHTTCSSHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHSCHHHHHHH
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHhcccHHHHHHHHhcCcHHHHHHHhcCCCHHHHHHHHHHHHHHHcCCCHHHHHHH
Confidence 4556666677888999999999999998778888888888899999999999999999999999999976 567888899
Q ss_pred hhhhHHHHHHHhhccccHHHHHHHHHHHHHHHh
Q psy4702 93 LSTELMEILMALTLLEGEEVRKLALQALAKGEE 125 (138)
Q Consensus 93 ~es~~leiL~~~~k~~~~~v~~~a~eaLk~~~~ 125 (138)
++.|++..|..+...++.+++..+.+||..+..
T Consensus 417 ~~~g~i~~L~~LL~~~d~~i~~~~L~aL~nil~ 449 (529)
T 3tpo_A 417 VHCGIIEPLMNLLSAKDTKIIQVILDAISNIFQ 449 (529)
T ss_dssp HHTTCHHHHHHGGGCSCHHHHHHHHHHHHHHHH
T ss_pred HHCcCHHHHHHHhcCCCHHHHHHHHHHHHHHHH
Confidence 999999999999887666888888888876654
No 12
>2z6g_A B-catenin; FULL-length, beta-catenin, cell adhesion; 3.40A {Danio rerio}
Probab=98.20 E-value=4.7e-06 Score=74.94 Aligned_cols=102 Identities=24% Similarity=0.189 Sum_probs=88.5
Q ss_pred CCHHHHHhhhhhhhhhccCCHHHHhhhhhccHHHHHHHHhcCCCcccchhhhhhhhhhhhcChHHHHHHhhhhHHHHHHH
Q psy4702 24 EDTETACAAAGALAMLTSVSTPVCSMLLEKNWVDIFKQILAHPDVGVQHRALVIVGNILSAGKELAERVLSTELMEILMA 103 (138)
Q Consensus 24 ED~~tr~AA~GALAmLT~~~~~~c~~I~~~~wleil~~L~~~~~~~lqHRG~viv~Nmi~a~~e~a~kl~es~~leiL~~ 103 (138)
.++.++.+|.|+|..|+. ++.....|.+..+++.|..|+.++++.+|+.++.++.|+. .+.+..+.|.+.|+++.|..
T Consensus 564 ~~~~v~~~a~~aL~~La~-~~~~~~~l~~~~~i~~Lv~lL~~~~~~v~~~a~~aL~~L~-~~~~~~~~i~~~g~i~~L~~ 641 (780)
T 2z6g_A 564 RMEEIVEACTGALHILAR-DIHNRIVIRGLNTIPLFVQLLYSPIENIQRVAAGVLCELA-QDKEAAEAIEAEGATAPLTE 641 (780)
T ss_dssp CHHHHHHHHHHHHHHHTT-SHHHHHHHHHTCCHHHHHHGGGCSCHHHHHHHHHHHHHHH-TSHHHHHHHHHTTCHHHHHH
T ss_pred ChHHHHHHHHHHHHHHhc-ChhhHHHHHHCCcHHHHHHHHcCCCHHHHHHHHHHHHHHh-cCHHHHHHHHHCCCHHHHHH
Confidence 456789999999999997 7776666656889999999999999999999999999997 56788899999999999999
Q ss_pred hhccccHHHHHHHHHHHHHHHhCC
Q psy4702 104 LTLLEGEEVRKLALQALAKGEEYG 127 (138)
Q Consensus 104 ~~k~~~~~v~~~a~eaLk~~~~~g 127 (138)
+.+.+..+|++.|..||..+.+..
T Consensus 642 Ll~~~~~~Vr~~A~~aL~~l~~~~ 665 (780)
T 2z6g_A 642 LLHSRNEGVATYAAAVLFRMSEDK 665 (780)
T ss_dssp GGGCSCHHHHHHHHHHHHHHHTTS
T ss_pred HHcCCCHHHHHHHHHHHHHHHcCC
Confidence 976554599999999999988744
No 13
>1xqr_A HSPBP1 protein; armadillo repeat, superhelical twist, chaperone; 2.10A {Homo sapiens} SCOP: a.118.1.21 PDB: 1xqs_A*
Probab=98.19 E-value=5.6e-06 Score=67.46 Aligned_cols=111 Identities=16% Similarity=0.125 Sum_probs=94.5
Q ss_pred hhhhhcCCCCHHHHHhhhhhhhhhccCCHHHHhhhhhccHHHHHHHHhcCCCcccchhhhhhhhhhhhcChHHHHHHhhh
Q psy4702 16 FLFLLTCEEDTETACAAAGALAMLTSVSTPVCSMLLEKNWVDIFKQILAHPDVGVQHRALVIVGNILSAGKELAERVLST 95 (138)
Q Consensus 16 lLvll~~eED~~tr~AA~GALAmLT~~~~~~c~~I~~~~wleil~~L~~~~~~~lqHRG~viv~Nmi~a~~e~a~kl~es 95 (138)
++-+|....|...++.|..||+.|+..++.....+.+..+++.|..++.++++.+|-+.+..+.|+...+.+..+.+++.
T Consensus 129 Ll~LL~~~~~~~v~~~A~~ALsnl~~~~~~~~~~~~~~ggi~~L~~lL~~~d~~v~~~A~~aLs~L~~~~~~~~~~vv~~ 208 (296)
T 1xqr_A 129 LLRLLDRDACDTVRVKALFAISCLVREQEAGLLQFLRLDGFSVLMRAMQQQVQKLKVKSAFLLQNLLVGHPEHKGTLCSM 208 (296)
T ss_dssp HHHHHHHCSCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGGGHHHHHHT
T ss_pred HHHHHccCCCHHHHHHHHHHHHHHHcCCcHHHHHHHHCCCHHHHHHHHcCCCHHHHHHHHHHHHHHHhCChHHHHHHHHc
Confidence 34455545578899999999999986467777777776799999999999999999999999999998888899999999
Q ss_pred hHHHHHHHhhccccHHHHHHHHHHHHHHHhC
Q psy4702 96 ELMEILMALTLLEGEEVRKLALQALAKGEEY 126 (138)
Q Consensus 96 ~~leiL~~~~k~~~~~v~~~a~eaLk~~~~~ 126 (138)
|++..|..+.+.++.++++.|..||..+...
T Consensus 209 g~i~~Lv~LL~~~d~~v~~~al~aL~~l~~~ 239 (296)
T 1xqr_A 209 GMVQQLVALVRTEHSPFHEHVLGALCSLVTD 239 (296)
T ss_dssp THHHHHHHHHTSCCSTHHHHHHHHHHHHHTT
T ss_pred CCHHHHHHHHcCCChhHHHHHHHHHHHHHhC
Confidence 9999999998776558888888888777654
No 14
>1jdh_A Beta-catenin; beta-catenin, protein-protein complex, transcription; 1.90A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qz7_A 1g3j_A 1th1_A* 1i7w_A* 1i7x_A 1jpp_A 1m1e_A 1v18_A* 3oux_A 3ouw_A 1jpw_A 3tx7_A* 2gl7_A 1t08_A 1luj_A 2bct_A 3bct_A* 3ifq_A* 3sla_A 3sl9_A
Probab=98.17 E-value=3.2e-06 Score=69.27 Aligned_cols=95 Identities=23% Similarity=0.208 Sum_probs=81.2
Q ss_pred HHHHhhhhhhhhhccCCHHHHhhhhhccHHHHHHHHhcCCCcccchhhhhhhhhhhhcChHHHHHHhhhhHHHHHHHhhc
Q psy4702 27 ETACAAAGALAMLTSVSTPVCSMLLEKNWVDIFKQILAHPDVGVQHRALVIVGNILSAGKELAERVLSTELMEILMALTL 106 (138)
Q Consensus 27 ~tr~AA~GALAmLT~~~~~~c~~I~~~~wleil~~L~~~~~~~lqHRG~viv~Nmi~a~~e~a~kl~es~~leiL~~~~k 106 (138)
..+.++.++|..|+. ++.....+.+..+++.|..++.++++++|+.+...+.|+. .+.+..+.+.+.|+++.|..+.+
T Consensus 434 ~i~~~~~~al~~L~~-~~~~~~~l~~~~~v~~l~~ll~~~~~~v~~~a~~~l~~l~-~~~~~~~~i~~~~~~~~L~~l~~ 511 (529)
T 1jdh_A 434 EIVEGCTGALHILAR-DVHNRIVIRGLNTIPLFVQLLYSPIENIQRVAAGVLCELA-QDKEAAEAIEAEGATAPLTELLH 511 (529)
T ss_dssp HHHHHHHHHHHHHTT-SHHHHHHHHHTTCHHHHHHGGGCSCHHHHHHHHHHHHHHT-TSHHHHHHHHHTTCHHHHHHGGG
T ss_pred HHHHHHHHHHHHHhc-CchHHHHHhccCCccHHHHHHcCCchHHHHHHHHHHHHHh-cCHHHHHHHHHcCChHHHHHHhc
Confidence 344577789999998 6877777777889999999999999999999999999987 45788899999999999999976
Q ss_pred cccHHHHHHHHHHHHHH
Q psy4702 107 LEGEEVRKLALQALAKG 123 (138)
Q Consensus 107 ~~~~~v~~~a~eaLk~~ 123 (138)
.++.+|.+.|..+|..+
T Consensus 512 ~~~~~v~~~a~~aL~~l 528 (529)
T 1jdh_A 512 SRNEGVATYAAAVLFRM 528 (529)
T ss_dssp CSSHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHhc
Confidence 65559999999998764
No 15
>3ul1_B Importin subunit alpha-2; arm repeat, armadillo repeat, nuclear transport, nuclear LOC signal binding, importin beta binding; 1.90A {Mus musculus} PDB: 3ukx_B 3uky_B 3ukz_B 3ukw_B 3ul0_B 3oqs_A 3rz9_A 3rzx_A 3uvu_A 1q1s_C 1q1t_C 3knd_A 1ejy_I 1iq1_C 1ejl_I 1pjn_B 1pjm_B 3q5u_A 3fey_C 3fex_C ...
Probab=98.17 E-value=8.2e-06 Score=69.28 Aligned_cols=112 Identities=16% Similarity=0.140 Sum_probs=95.0
Q ss_pred hhhhhhcCCCCHHHHHhhhhhhhhhccCCHHHHhhhhhccHHHHHHHHhcCCCcccchhhhhhhhhhhh-cChHHHHHHh
Q psy4702 15 RFLFLLTCEEDTETACAAAGALAMLTSVSTPVCSMLLEKNWVDIFKQILAHPDVGVQHRALVIVGNILS-AGKELAERVL 93 (138)
Q Consensus 15 klLvll~~eED~~tr~AA~GALAmLT~~~~~~c~~I~~~~wleil~~L~~~~~~~lqHRG~viv~Nmi~-a~~e~a~kl~ 93 (138)
..|+-|-...+...+..|+++|.-||..++.....+.+...++.|..++.+++.++|..++..+.|+.. ++.+....++
T Consensus 319 ~~L~~LL~~~~~~v~~~A~~aL~nl~a~~~~~~~~v~~~g~i~~Lv~lL~~~~~~v~~~Aa~aL~Nl~~~~~~~~~~~L~ 398 (510)
T 3ul1_B 319 AVFPSLLTNPKTNIQKEATWTMSNITAGRQDQIQQVVNHGLVPFLVGVLSKADFKTQKEAAWAITNYTSGGTVEQIVYLV 398 (510)
T ss_dssp GGCC-CTTCSSHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCCHHHHHHHH
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHHcCcHHHHHHHHhcCCHHHHHHHHcCCCHHHHHHHHHHHHHHHccCCHHHHHHHH
Confidence 345555567788899999999999998677777778778899999999999999999999999999986 5677788899
Q ss_pred hhhHHHHHHHhhccccHHHHHHHHHHHHHHHhC
Q psy4702 94 STELMEILMALTLLEGEEVRKLALQALAKGEEY 126 (138)
Q Consensus 94 es~~leiL~~~~k~~~~~v~~~a~eaLk~~~~~ 126 (138)
+.|+++.|..+.+.++.+++..+.++|..+..+
T Consensus 399 ~~g~i~~L~~LL~~~d~~i~~~~L~aL~nil~~ 431 (510)
T 3ul1_B 399 HCGIIEPLMNLLSAKDTKIIQVILDAISNIFQA 431 (510)
T ss_dssp HTTCHHHHHHGGGCSCHHHHHHHHHHHHHHHHH
T ss_pred HCCCHHHHHHHhcCCCHHHHHHHHHHHHHHHHH
Confidence 999999999998876668888888888776543
No 16
>1jdh_A Beta-catenin; beta-catenin, protein-protein complex, transcription; 1.90A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qz7_A 1g3j_A 1th1_A* 1i7w_A* 1i7x_A 1jpp_A 1m1e_A 1v18_A* 3oux_A 3ouw_A 1jpw_A 3tx7_A* 2gl7_A 1t08_A 1luj_A 2bct_A 3bct_A* 3ifq_A* 3sla_A 3sl9_A
Probab=98.12 E-value=1.3e-05 Score=65.70 Aligned_cols=104 Identities=17% Similarity=0.136 Sum_probs=86.7
Q ss_pred hhcCCCCHHHHHhhhhhhhhhccCCHHHHhhhhhccHHHHHHHHhcCCCcccchhhhhhhhhhhhcChHHHHHHhhhhHH
Q psy4702 19 LLTCEEDTETACAAAGALAMLTSVSTPVCSMLLEKNWVDIFKQILAHPDVGVQHRALVIVGNILSAGKELAERVLSTELM 98 (138)
Q Consensus 19 ll~~eED~~tr~AA~GALAmLT~~~~~~c~~I~~~~wleil~~L~~~~~~~lqHRG~viv~Nmi~a~~e~a~kl~es~~l 98 (138)
+|...+|..+++.|+++|..|+. ++.....|.+...++.|..++.++++++|+.++-+++|+...+.+..+.+++.|++
T Consensus 67 ~L~~~~~~~~~~~a~~~L~~ls~-~~~~~~~i~~~g~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~i~~~g~i 145 (529)
T 1jdh_A 67 TMQNTNDVETARCTAGTLHNLSH-HREGLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGAKMAVRLAGGL 145 (529)
T ss_dssp HHHHCCCHHHHHHHHHHHHHHTT-SHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHHHCTTHHHHHHHHTHH
T ss_pred HHhcCCCHHHHHHHHHHHHHHHc-CchhHHHHHHcCCHHHHHHHHcCCCHHHHHHHHHHHHHHhcCCcchHHHHHHcCCH
Confidence 35555799999999999999998 67777777778899999999999999999999999999988776677788899999
Q ss_pred HHHHHhhccccHHHHHHHHHHHHHH
Q psy4702 99 EILMALTLLEGEEVRKLALQALAKG 123 (138)
Q Consensus 99 eiL~~~~k~~~~~v~~~a~eaLk~~ 123 (138)
..|..+.+.+..++...+..+|..+
T Consensus 146 ~~L~~ll~~~~~~~~~~~~~~L~~l 170 (529)
T 1jdh_A 146 QKMVALLNKTNVKFLAITTDCLQIL 170 (529)
T ss_dssp HHHHHGGGCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCHHHHHHHHHHHHHH
Confidence 9999998865436666666666543
No 17
>2z6h_A Catenin beta-1, beta-catenin; C-terminal domain, activator, alternative splicing, cell adhesion, cytoplasm, cytoskeleton, disease mutation, nucleus; 2.20A {Homo sapiens}
Probab=98.12 E-value=9.2e-06 Score=70.32 Aligned_cols=103 Identities=22% Similarity=0.178 Sum_probs=88.2
Q ss_pred CCCHHHHHhhhhhhhhhccCCHHHHhhhhhccHHHHHHHHhcCCCcccchhhhhhhhhhhhcChHHHHHHhhhhHHHHHH
Q psy4702 23 EEDTETACAAAGALAMLTSVSTPVCSMLLEKNWVDIFKQILAHPDVGVQHRALVIVGNILSAGKELAERVLSTELMEILM 102 (138)
Q Consensus 23 eED~~tr~AA~GALAmLT~~~~~~c~~I~~~~wleil~~L~~~~~~~lqHRG~viv~Nmi~a~~e~a~kl~es~~leiL~ 102 (138)
..++.++.+|.+||..|+. ++.....+.+..+++.|..++.++++++|..++.++.|+.. +++..+.+.+.|+++.|.
T Consensus 427 ~~~~~v~~~a~~aL~~La~-~~~~~~~l~~~~~i~~Lv~lL~~~~~~v~~~a~~aL~~l~~-~~~~~~~i~~~g~l~~L~ 504 (644)
T 2z6h_A 427 VRMEEIVEGCTGALHILAR-DVHNRIVIRGLNTIPLFVQLLYSPIENIQRVAAGVLCELAQ-DKEAAEAIEAEGATAPLT 504 (644)
T ss_dssp SCHHHHHHHHHHHHHHHTT-SHHHHHHHHHTTCHHHHHHHTTCSCHHHHHHHHHHHHHHHT-SHHHHHHHHHTTCHHHHH
T ss_pred ccHHHHHHHHHHHHHHHhc-CHHHHHHHHhCCcHHHHHHHHcCCCHHHHHHHHHHHHHHHc-CHHHHHHHHHcCChhHHH
Confidence 3567889999999999998 67665555558899999999999999999999999999874 588899999999999999
Q ss_pred HhhccccHHHHHHHHHHHHHHHhCC
Q psy4702 103 ALTLLEGEEVRKLALQALAKGEEYG 127 (138)
Q Consensus 103 ~~~k~~~~~v~~~a~eaLk~~~~~g 127 (138)
.+.+.+..+|++.|..+|..+.+.+
T Consensus 505 ~ll~~~~~~vr~~A~~aL~~l~~~~ 529 (644)
T 2z6h_A 505 ELLHSRNEGVATYAAAVLFRMSEDK 529 (644)
T ss_dssp HHTTCSCHHHHHHHHHHHHHHTTTS
T ss_pred HHHcCCCHHHHHHHHHHHHHHhccC
Confidence 9977664599999999998887644
No 18
>4b8j_A Importin subunit alpha-1A; transport protein, nuclear localization signal; 2.00A {Oryza sativa japonica group} PDB: 4b8o_A 2yns_A 4b8p_A
Probab=98.09 E-value=7.6e-06 Score=68.24 Aligned_cols=113 Identities=12% Similarity=0.150 Sum_probs=94.9
Q ss_pred hhhhhhhcCCC-CHHHHHhhhhhhhhhccCCHHHHhhhhhccHHHHHHHHhcCCCcccchhhhhhhhhhhhc-ChHHHHH
Q psy4702 14 VRFLFLLTCEE-DTETACAAAGALAMLTSVSTPVCSMLLEKNWVDIFKQILAHPDVGVQHRALVIVGNILSA-GKELAER 91 (138)
Q Consensus 14 lklLvll~~eE-D~~tr~AA~GALAmLT~~~~~~c~~I~~~~wleil~~L~~~~~~~lqHRG~viv~Nmi~a-~~e~a~k 91 (138)
+..|+-+.... +..++..|.++|.-|+..++..+..+++...++.|..++.++++++|..++..+.|+... +.+....
T Consensus 330 l~~L~~lL~~~~~~~v~~~A~~~L~nl~~~~~~~~~~~~~~~~i~~L~~lL~~~~~~v~~~a~~aL~nl~~~~~~~~~~~ 409 (528)
T 4b8j_A 330 LPCLLSLLTQNLKKSIKKEACWTISNITAGNKDQIQAVINAGIIGPLVNLLQTAEFDIKKEAAWAISNATSGGSHDQIKY 409 (528)
T ss_dssp HHHHHHHHHSCCCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTCHHHHHHHHHHSCHHHHHHHHHHHHHHHHHSCHHHHHH
T ss_pred HHHHHHHHcCCCcHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHhcCCHHHHHHHHHHHHHHHcCCCHHHHHH
Confidence 34444444445 899999999999999976778888888877899999999999999999999999999876 6888899
Q ss_pred HhhhhHHHHHHHhhccccHHHHHHHHHHHHHHHhC
Q psy4702 92 VLSTELMEILMALTLLEGEEVRKLALQALAKGEEY 126 (138)
Q Consensus 92 l~es~~leiL~~~~k~~~~~v~~~a~eaLk~~~~~ 126 (138)
+++.++++.|..+....+.+++..+..+|..+...
T Consensus 410 l~~~~~i~~L~~lL~~~d~~v~~~al~~L~~l~~~ 444 (528)
T 4b8j_A 410 LVSEGCIKPLCDLLICPDIRIVTVCLEGLENILKV 444 (528)
T ss_dssp HHHTTCHHHHHHGGGCSCHHHHHHHHHHHHHHHHH
T ss_pred HHHCCCHHHHHHHHcCCCHHHHHHHHHHHHHHHHH
Confidence 99999999999998876558888888888777643
No 19
>1wa5_B Importin alpha subunit; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1un0_A 2c1t_A 1bk5_A 1ee5_A 1bk6_A 1ee4_A
Probab=98.03 E-value=3.7e-05 Score=64.40 Aligned_cols=111 Identities=23% Similarity=0.224 Sum_probs=95.5
Q ss_pred hhhhhhhcCCCCHHHHHhhhhhhhhhccCCHHHHhhhhhccHHHHHHHHhcCCCcccchhhhhhhhhhhhcChHHHHHHh
Q psy4702 14 VRFLFLLTCEEDTETACAAAGALAMLTSVSTPVCSMLLEKNWVDIFKQILAHPDVGVQHRALVIVGNILSAGKELAERVL 93 (138)
Q Consensus 14 lklLvll~~eED~~tr~AA~GALAmLT~~~~~~c~~I~~~~wleil~~L~~~~~~~lqHRG~viv~Nmi~a~~e~a~kl~ 93 (138)
+..|+-+...+|..++..|.++|..|+..++.....+++...++.|..++.++++.++..++-++.|+...+.+..+.++
T Consensus 259 l~~L~~lL~~~d~~v~~~a~~~L~~L~~~~~~~~~~~~~~~~v~~Lv~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~ 338 (530)
T 1wa5_B 259 LPTLAKLIYSMDTETLVDACWAISYLSDGPQEAIQAVIDVRIPKRLVELLSHESTLVQTPALRAVGNIVTGNDLQTQVVI 338 (530)
T ss_dssp HHHHHHHTTCCCHHHHHHHHHHHHHHHSSCHHHHHHHHHTTCHHHHHHGGGCSCHHHHHHHHHHHHHHTTSCHHHHHHHH
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHhCCCHHHHHHHHhcCcHHHHHHHHCCCChhhHHHHHHHHHHHHcCCHHHHHHHH
Confidence 45566666778899999999999999985677777777777899999999999999999999999999998888889999
Q ss_pred hhhHHHHHHHhhccccHHHHHHHHHHHHHHH
Q psy4702 94 STELMEILMALTLLEGEEVRKLALQALAKGE 124 (138)
Q Consensus 94 es~~leiL~~~~k~~~~~v~~~a~eaLk~~~ 124 (138)
+.|++..|..+.+.++..+++.|..+|..+.
T Consensus 339 ~~~~l~~L~~lL~~~~~~vr~~A~~aL~~l~ 369 (530)
T 1wa5_B 339 NAGVLPALRLLLSSPKENIKKEACWTISNIT 369 (530)
T ss_dssp HTTHHHHHHHHTTCSCHHHHHHHHHHHHHHT
T ss_pred HcchHHHHHHHHcCCCHHHHHHHHHHHHHHH
Confidence 9999999999988764478888888887665
No 20
>1wa5_B Importin alpha subunit; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1un0_A 2c1t_A 1bk5_A 1ee5_A 1bk6_A 1ee4_A
Probab=98.02 E-value=3.6e-05 Score=64.48 Aligned_cols=112 Identities=17% Similarity=0.208 Sum_probs=94.0
Q ss_pred hhhhhhcCCCCHHHHHhhhhhhhhhccCCHHHHhhhhhccHHHHHHHHhcCCCcccchhhhhhhhhhhhcChHHHHHHhh
Q psy4702 15 RFLFLLTCEEDTETACAAAGALAMLTSVSTPVCSMLLEKNWVDIFKQILAHPDVGVQHRALVIVGNILSAGKELAERVLS 94 (138)
Q Consensus 15 klLvll~~eED~~tr~AA~GALAmLT~~~~~~c~~I~~~~wleil~~L~~~~~~~lqHRG~viv~Nmi~a~~e~a~kl~e 94 (138)
..|+-+....|...+.+|..+|..|+..++.....+++..+++.|..++.++++.+|+.++.++.|+...+.+....+++
T Consensus 302 ~~Lv~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~l~~L~~lL~~~~~~vr~~A~~aL~~l~~~~~~~~~~~~~ 381 (530)
T 1wa5_B 302 KRLVELLSHESTLVQTPALRAVGNIVTGNDLQTQVVINAGVLPALRLLLSSPKENIKKEACWTISNITAGNTEQIQAVID 381 (530)
T ss_dssp HHHHHGGGCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHH
T ss_pred HHHHHHHCCCChhhHHHHHHHHHHHHcCCHHHHHHHHHcchHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 34455555678899999999999999756777777777789999999999999999999999999999888888888999
Q ss_pred hhHHHHHHHhhccccHHHHHHHHHHHHHHHhC
Q psy4702 95 TELMEILMALTLLEGEEVRKLALQALAKGEEY 126 (138)
Q Consensus 95 s~~leiL~~~~k~~~~~v~~~a~eaLk~~~~~ 126 (138)
.+++..|..+.+.+..+++..|..+|..+...
T Consensus 382 ~~~l~~L~~lL~~~~~~v~~~a~~aL~~l~~~ 413 (530)
T 1wa5_B 382 ANLIPPLVKLLEVAEYKTKKEACWAISNASSG 413 (530)
T ss_dssp TTCHHHHHHHHHHSCHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHhcCCHHHHHHHHHHHHHHHhc
Confidence 99999999998765448888888888776543
No 21
>4b8j_A Importin subunit alpha-1A; transport protein, nuclear localization signal; 2.00A {Oryza sativa japonica group} PDB: 4b8o_A 2yns_A 4b8p_A
Probab=98.01 E-value=3.8e-05 Score=63.99 Aligned_cols=112 Identities=13% Similarity=0.152 Sum_probs=94.9
Q ss_pred hhhhhhcCCCCHHHHHhhhhhhhhhccCCHHHHhhhhhccHHHHHHHHhcCC-CcccchhhhhhhhhhhhcChHHHHHHh
Q psy4702 15 RFLFLLTCEEDTETACAAAGALAMLTSVSTPVCSMLLEKNWVDIFKQILAHP-DVGVQHRALVIVGNILSAGKELAERVL 93 (138)
Q Consensus 15 klLvll~~eED~~tr~AA~GALAmLT~~~~~~c~~I~~~~wleil~~L~~~~-~~~lqHRG~viv~Nmi~a~~e~a~kl~ 93 (138)
..|+-+....+..++..|.++|+.|+..++.....+++...++.|..++.++ ++.+|..++.++.|+...+.+....++
T Consensus 289 ~~Lv~lL~~~~~~v~~~a~~~L~nl~~~~~~~~~~~~~~~~l~~L~~lL~~~~~~~v~~~A~~~L~nl~~~~~~~~~~~~ 368 (528)
T 4b8j_A 289 PRLVELLLHPSPSVLIPALRTVGNIVTGDDAQTQCIIDHQALPCLLSLLTQNLKKSIKKEACWTISNITAGNKDQIQAVI 368 (528)
T ss_dssp HHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHTTTHHHHHHHHHHSCCCHHHHHHHHHHHHHHHTSCHHHHHHHH
T ss_pred HHHHHHHcCCChhHHHHHHHHHHHHHcCCHHHHHHHHHhhhHHHHHHHHcCCCcHHHHHHHHHHHHHHHCCCHHHHHHHH
Confidence 4455556667889999999999999986677788888878999999999999 999999999999999988888888999
Q ss_pred hhhHHHHHHHhhccccHHHHHHHHHHHHHHHhC
Q psy4702 94 STELMEILMALTLLEGEEVRKLALQALAKGEEY 126 (138)
Q Consensus 94 es~~leiL~~~~k~~~~~v~~~a~eaLk~~~~~ 126 (138)
+.+++..|..+.+..+.++++.|..+|..+...
T Consensus 369 ~~~~i~~L~~lL~~~~~~v~~~a~~aL~nl~~~ 401 (528)
T 4b8j_A 369 NAGIIGPLVNLLQTAEFDIKKEAAWAISNATSG 401 (528)
T ss_dssp HTTCHHHHHHHHHHSCHHHHHHHHHHHHHHHHH
T ss_pred HCCCHHHHHHHHhcCCHHHHHHHHHHHHHHHcC
Confidence 999999999998776447788888887766544
No 22
>3ul1_B Importin subunit alpha-2; arm repeat, armadillo repeat, nuclear transport, nuclear LOC signal binding, importin beta binding; 1.90A {Mus musculus} PDB: 3ukx_B 3uky_B 3ukz_B 3ukw_B 3ul0_B 3oqs_A 3rz9_A 3rzx_A 3uvu_A 1q1s_C 1q1t_C 3knd_A 1ejy_I 1iq1_C 1ejl_I 1pjn_B 1pjm_B 3q5u_A 3fey_C 3fex_C ...
Probab=98.01 E-value=5.2e-05 Score=64.31 Aligned_cols=110 Identities=18% Similarity=0.224 Sum_probs=92.2
Q ss_pred hhhhhcCCCCHHHHHhhhhhhhhhccCCHHHHhhhhhccHHHHHHHHhcCCCcccchhhhhhhhhhhhcChHHHHHHhhh
Q psy4702 16 FLFLLTCEEDTETACAAAGALAMLTSVSTPVCSMLLEKNWVDIFKQILAHPDVGVQHRALVIVGNILSAGKELAERVLST 95 (138)
Q Consensus 16 lLvll~~eED~~tr~AA~GALAmLT~~~~~~c~~I~~~~wleil~~L~~~~~~~lqHRG~viv~Nmi~a~~e~a~kl~es 95 (138)
++-+|...++..++..|++||.-|.+.++..++.|++...++.|..++.++++++|..++-++.|+...+.+....+.+.
T Consensus 105 LV~lL~~~~~~~lq~~Aa~aL~nias~~~e~~~~vv~~GaIp~Lv~lL~s~~~~v~e~A~~aL~nLa~d~~~~r~~v~~~ 184 (510)
T 3ul1_B 105 FVSFLGKTDCSPIQFESAWALTNIASGTSEQTKAVVDGGAIPAFISLLASPHAHISEQAVWALGNIAGDGSAFRDLVIKH 184 (510)
T ss_dssp HHHHTTCTTCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHTTCHHHHHHHHHT
T ss_pred HHHHHCCCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHCCCHHHHHHHHcCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHc
Confidence 34456677889999999999999977678899999997799999999999999999999999999998888888999999
Q ss_pred hHHHHHHHhhccccH-----HHHHHHHHHHHHHHh
Q psy4702 96 ELMEILMALTLLEGE-----EVRKLALQALAKGEE 125 (138)
Q Consensus 96 ~~leiL~~~~k~~~~-----~v~~~a~eaLk~~~~ 125 (138)
|+++.|..+.+..+. .++..+..+|..+..
T Consensus 185 G~i~~Ll~lL~~~~~~~~~~~~~~~a~~~L~nl~~ 219 (510)
T 3ul1_B 185 GAIDPLLALLAVPDLSTLACGYLRNLTWTLSNLCR 219 (510)
T ss_dssp TCHHHHHHHTCSSCGGGSCHHHHHHHHHHHHHHHC
T ss_pred CChHHHHHHHHhccchhhhHHHHHHHHHHHHHHhh
Confidence 999999999876431 456666666665543
No 23
>3tpo_A Importin subunit alpha-2; nuclear import, protein transport; 2.10A {Mus musculus} PDB: 1qgk_B 1qgr_B
Probab=97.99 E-value=2.8e-05 Score=65.98 Aligned_cols=109 Identities=16% Similarity=0.210 Sum_probs=92.5
Q ss_pred hhhhhhcCCCCHHHHHhhhhhhhhhccCCHHHHhhhhhccHHHHHHHHhcCCCcccchhhhhhhhhhhhcChHHHHHHhh
Q psy4702 15 RFLFLLTCEEDTETACAAAGALAMLTSVSTPVCSMLLEKNWVDIFKQILAHPDVGVQHRALVIVGNILSAGKELAERVLS 94 (138)
Q Consensus 15 klLvll~~eED~~tr~AA~GALAmLT~~~~~~c~~I~~~~wleil~~L~~~~~~~lqHRG~viv~Nmi~a~~e~a~kl~e 94 (138)
..|+-|....|...+..|..+|.-+++.++.....+++...++.|..|+.++++++|..++.++.|+...+.+....+++
T Consensus 296 ~~Lv~lL~~~~~~v~~~a~~aL~nl~~~~~~~~~~i~~~g~l~~L~~LL~~~~~~i~~~a~~aL~nl~~~~~~~~~~v~~ 375 (529)
T 3tpo_A 296 PQLVKLLGATELPIVTPALRAIGNIVTGTDEQTQKVIDAGALAVFPSLLTNPKTNIQKEATWTMSNITAGRQDQIQQVVN 375 (529)
T ss_dssp HHHHHHHTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTGGGGHHHHTTCSSHHHHHHHHHHHHHHHTSCHHHHHHHHH
T ss_pred HHHHHHhcCCChhHHHHHHHHHHHHHccchHHHHHHhhcccHHHHHHHHcCCCHHHHHHHHHHHHHHhcccHHHHHHHHh
Confidence 34566667789999999999999887657888888888779999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHhhccccHHHHHHHHHHHHHH
Q psy4702 95 TELMEILMALTLLEGEEVRKLALQALAKG 123 (138)
Q Consensus 95 s~~leiL~~~~k~~~~~v~~~a~eaLk~~ 123 (138)
.|++..|..+.+.+..+++..|..||.-+
T Consensus 376 ~g~i~~Lv~lL~~~~~~v~~~A~~aL~nl 404 (529)
T 3tpo_A 376 HGLVPFLVGVLSKADFKTQKAAAWAITNY 404 (529)
T ss_dssp TTHHHHHHHHHHSSCHHHHHHHHHHHHHH
T ss_pred cCcHHHHHHHhcCCCHHHHHHHHHHHHHH
Confidence 99999999998876546666666666433
No 24
>1xm9_A Plakophilin 1; armadillo repeat, cell adhesion; 2.80A {Homo sapiens} SCOP: a.118.1.24
Probab=97.96 E-value=2.4e-05 Score=65.73 Aligned_cols=109 Identities=12% Similarity=0.033 Sum_probs=90.3
Q ss_pred hhhhcCCCCHHHHHhhhhhhhhhccCCHHHHhhhhhccHHHHHHHHhcCCCcccchhhhhhhhhhhhcChHHHHHHhhhh
Q psy4702 17 LFLLTCEEDTETACAAAGALAMLTSVSTPVCSMLLEKNWVDIFKQILAHPDVGVQHRALVIVGNILSAGKELAERVLSTE 96 (138)
Q Consensus 17 Lvll~~eED~~tr~AA~GALAmLT~~~~~~c~~I~~~~wleil~~L~~~~~~~lqHRG~viv~Nmi~a~~e~a~kl~es~ 96 (138)
++-+-..+|+..+..|+.+|.-|+..++..-..|.+..+++.|..++.++++++|..++-.++|+...+.+.-..+++.|
T Consensus 7 lv~~L~s~~~~~q~~A~~~L~~l~~~~~~~~~~i~~~g~i~~Lv~lL~s~~~~~~~~A~~aL~nLa~~~~~~k~~i~~~G 86 (457)
T 1xm9_A 7 AVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLETRRQN 86 (457)
T ss_dssp HHHHHHSSCTHHHHHHHHHHHHHTSSCSSHHHHHHHTTHHHHHHHHTTSSCHHHHHHHHHHHHHHHSSCHHHHHHHHHTT
T ss_pred HHHHHCCCCHHHHHHHHHHHHHHHcCChHHHHHHHHcCCHHHHHHHHcCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHcC
Confidence 44444456788999999999999874455555777788999999999999999999999999999987788889999999
Q ss_pred HHHHHHHhhccccH-HHHHHHHHHHHHHHh
Q psy4702 97 LMEILMALTLLEGE-EVRKLALQALAKGEE 125 (138)
Q Consensus 97 ~leiL~~~~k~~~~-~v~~~a~eaLk~~~~ 125 (138)
++..|..+.+.+.+ ++.+.|..||.-+-.
T Consensus 87 ~i~~Lv~lL~~~~~~~~~~~a~~aL~nLa~ 116 (457)
T 1xm9_A 87 GIREAVSLLRRTGNAEIQKQLTGLLWNLSS 116 (457)
T ss_dssp CHHHHHHHHTTCCCHHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHhhCCCHHHHHHHHHHHHHHhc
Confidence 99999999985444 888888888865543
No 25
>2z6h_A Catenin beta-1, beta-catenin; C-terminal domain, activator, alternative splicing, cell adhesion, cytoplasm, cytoskeleton, disease mutation, nucleus; 2.20A {Homo sapiens}
Probab=97.96 E-value=3.9e-05 Score=66.37 Aligned_cols=106 Identities=17% Similarity=0.124 Sum_probs=88.0
Q ss_pred hhhcCCCCHHHHHhhhhhhhhhccCCHHHHhhhhhccHHHHHHHHhcCCCcccchhhhhhhhhhhhcChHHHHHHhhhhH
Q psy4702 18 FLLTCEEDTETACAAAGALAMLTSVSTPVCSMLLEKNWVDIFKQILAHPDVGVQHRALVIVGNILSAGKELAERVLSTEL 97 (138)
Q Consensus 18 vll~~eED~~tr~AA~GALAmLT~~~~~~c~~I~~~~wleil~~L~~~~~~~lqHRG~viv~Nmi~a~~e~a~kl~es~~ 97 (138)
-+|...+|..+++.|+++|..|+. ++.....|.+...++.|..++.++++.+|..++-++.|+...+.+....+++.|+
T Consensus 63 ~~L~~~~~~~~~~~A~~~L~~Ls~-~~~~~~~i~~~g~i~~Lv~lL~~~~~~v~~~A~~aL~nL~~~~~~~~~~v~~~g~ 141 (644)
T 2z6h_A 63 RTMQNTNDVETARCTAGTLHNLSH-HREGLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGAKMAVRLAGG 141 (644)
T ss_dssp HHHHSCCCHHHHHHHHHHHHHHTT-SHHHHHHHHTTTHHHHHHHHTTCSSHHHHHHHHHHHHHHHHHSTTHHHHHHHTTH
T ss_pred HHHhcCCCHHHHHHHHHHHHHHhc-ChhhHHHHHHcCCHHHHHHHHhCCCHHHHHHHHHHHHHHHhCcchhHHHHHHCCC
Confidence 345556799999999999999998 6777777777889999999999999999999999999999877677788889999
Q ss_pred HHHHHHhhccccHHHHHHHHHHHHHHH
Q psy4702 98 MEILMALTLLEGEEVRKLALQALAKGE 124 (138)
Q Consensus 98 leiL~~~~k~~~~~v~~~a~eaLk~~~ 124 (138)
+..|..+.+.+..++...+..||..+.
T Consensus 142 i~~Lv~lL~~~~~~~~~~a~~~L~~La 168 (644)
T 2z6h_A 142 LQKMVALLNKTNVKFLAITTDCLQILA 168 (644)
T ss_dssp HHHHHHGGGCCCHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHCcCCHHHHHHHHHHHHHHH
Confidence 999999988754366666666665543
No 26
>3tt9_A Plakophilin-2; cell adhesion; 1.55A {Homo sapiens}
Probab=97.89 E-value=6.4e-05 Score=59.87 Aligned_cols=107 Identities=12% Similarity=-0.006 Sum_probs=84.5
Q ss_pred hhhhcCCCCH--HHHHhhhhhhhhhccCCHHHHhhhhhccHHHHHHHHhcCCCcccchhhhhhhhhhhhcChHHHHHHhh
Q psy4702 17 LFLLTCEEDT--ETACAAAGALAMLTSVSTPVCSMLLEKNWVDIFKQILAHPDVGVQHRALVIVGNILSAGKELAERVLS 94 (138)
Q Consensus 17 Lvll~~eED~--~tr~AA~GALAmLT~~~~~~c~~I~~~~wleil~~L~~~~~~~lqHRG~viv~Nmi~a~~e~a~kl~e 94 (138)
++-+-..+|+ ..+..|++++..|+.-++..-..|.+..+++.|..|+.++++++|..++-.++|+...+.+.-..+.+
T Consensus 13 lV~lL~s~~~~~~~q~~Aa~~l~~L~~~~~~~r~~I~~~G~Ip~LV~lL~s~~~~vq~~Aa~aL~nLa~~~~~nk~~I~~ 92 (233)
T 3tt9_A 13 AVSMLEADHMLPSRISAAATFIQHECFQKSEARKRVNQLRGILKLLQLLKVQNEDVQRAVCGALRNLVFEDNDNKLEVAE 92 (233)
T ss_dssp HHHTCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHTTHHHHHHHGGGCCCHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHhCCCCchHHHHHHHHHHHHHHHcCCcHHHHHHHHcCCHHHHHHHHcCCCHHHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 4433344444 78888888999998645667677777789999999999999999999999999998877788888999
Q ss_pred hhHHHHHHHhhccccH-HHHHHHHHHHHHH
Q psy4702 95 TELMEILMALTLLEGE-EVRKLALQALAKG 123 (138)
Q Consensus 95 s~~leiL~~~~k~~~~-~v~~~a~eaLk~~ 123 (138)
.|++..|..+.+.+.. ++.+.|..+|--+
T Consensus 93 ~GaI~~Lv~lL~~~~~~~~~e~a~~aL~nL 122 (233)
T 3tt9_A 93 LNGVPRLLQVLKQTRDLETKKQITGLLWNL 122 (233)
T ss_dssp TTHHHHHHHHHHHCCCHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHccCCCHHHHHHHHHHHHHH
Confidence 9999999999875433 6666666555443
No 27
>1xqr_A HSPBP1 protein; armadillo repeat, superhelical twist, chaperone; 2.10A {Homo sapiens} SCOP: a.118.1.21 PDB: 1xqs_A*
Probab=97.81 E-value=0.00019 Score=58.42 Aligned_cols=111 Identities=11% Similarity=0.042 Sum_probs=90.8
Q ss_pred hhhhhh-hcCCCCHHHHHhhhhhhhhhccCCHHHHhhhhhccHHHHHHHHhcC-CCcccchhhhhhhhhhhhcChHHHHH
Q psy4702 14 VRFLFL-LTCEEDTETACAAAGALAMLTSVSTPVCSMLLEKNWVDIFKQILAH-PDVGVQHRALVIVGNILSAGKELAER 91 (138)
Q Consensus 14 lklLvl-l~~eED~~tr~AA~GALAmLT~~~~~~c~~I~~~~wleil~~L~~~-~~~~lqHRG~viv~Nmi~a~~e~a~k 91 (138)
+..|+- |-...|...|..|+-+|+.++..+|.+-..+++..+++.|..|+.+ +++.++-..+..+.|++.......+.
T Consensus 83 l~~Lv~~lL~s~~~~vr~~Aa~~Lg~ia~~n~~~~~~vv~~g~l~~Ll~LL~~~~~~~v~~~A~~ALsnl~~~~~~~~~~ 162 (296)
T 1xqr_A 83 MHLLVGRYLEAGAAGLRWRAAQLIGTCSQNVAAIQEQVLGLGALRKLLRLLDRDACDTVRVKALFAISCLVREQEAGLLQ 162 (296)
T ss_dssp HHHHHHTTTTCSSHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHHHCSCHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHCCCHHHHHHHHccCCCHHHHHHHHHHHHHHHcCCcHHHHH
Confidence 345555 5567889999999999999987567666667778899999999985 58899999999999999888888889
Q ss_pred HhhhhHHHHHHHhhccccHHHHHHHHHHHHHHH
Q psy4702 92 VLSTELMEILMALTLLEGEEVRKLALQALAKGE 124 (138)
Q Consensus 92 l~es~~leiL~~~~k~~~~~v~~~a~eaLk~~~ 124 (138)
+.+.|++..|..+.+.++.+++..|.-+|.-+.
T Consensus 163 ~~~~ggi~~L~~lL~~~d~~v~~~A~~aLs~L~ 195 (296)
T 1xqr_A 163 FLRLDGFSVLMRAMQQQVQKLKVKSAFLLQNLL 195 (296)
T ss_dssp HHHTTHHHHHHHHHHSSCHHHHHHHHHHHHHHH
T ss_pred HHHCCCHHHHHHHHcCCCHHHHHHHHHHHHHHH
Confidence 999999999999988765477777777776543
No 28
>2z6g_A B-catenin; FULL-length, beta-catenin, cell adhesion; 3.40A {Danio rerio}
Probab=97.79 E-value=8.1e-05 Score=66.89 Aligned_cols=104 Identities=16% Similarity=0.137 Sum_probs=87.8
Q ss_pred hhcCCCCHHHHHhhhhhhhhhccCCHHHHhhhhhccHHHHHHHHhcCCCcccchhhhhhhhhhhhcChHHHHHHhhhhHH
Q psy4702 19 LLTCEEDTETACAAAGALAMLTSVSTPVCSMLLEKNWVDIFKQILAHPDVGVQHRALVIVGNILSAGKELAERVLSTELM 98 (138)
Q Consensus 19 ll~~eED~~tr~AA~GALAmLT~~~~~~c~~I~~~~wleil~~L~~~~~~~lqHRG~viv~Nmi~a~~e~a~kl~es~~l 98 (138)
+|...+|..+|+.|.++|..|+. ++.....|.+...++.|..++.++++.+|+-++-++.|+...+.+....+++.|++
T Consensus 200 ~L~~~~d~~vr~~Aa~aL~~Ls~-~~~~~~~i~~~g~I~~Lv~lL~~~~~~v~~~A~~aL~nLa~~~~~~~~~v~~~g~v 278 (780)
T 2z6g_A 200 TMQNTNDVETARCTSGTLHNLSH-HREGLLAIFKSGGIPALVNMLGSPVDSVLFHAITTLHNLLLHQEGAKMAVRLAGGL 278 (780)
T ss_dssp HHHHCCCHHHHHHHHHHHHHHHT-SHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHHHSTTHHHHHHHTTHH
T ss_pred HHcCCCCHHHHHHHHHHHHHHhC-CchhHHHHHHcCCHHHHHHHHcCCCHHHHHHHHHHHHHHhCCChhhHHHHHHcCCH
Confidence 45556799999999999999998 57666667667899999999999999999999999999998877777888899999
Q ss_pred HHHHHhhccccHHHHHHHHHHHHHH
Q psy4702 99 EILMALTLLEGEEVRKLALQALAKG 123 (138)
Q Consensus 99 eiL~~~~k~~~~~v~~~a~eaLk~~ 123 (138)
..|..+.+.+..++.+.+..||..+
T Consensus 279 ~~Lv~lL~~~~~~v~~~a~~aL~~L 303 (780)
T 2z6g_A 279 QKMVALLNKTNVKFLAITTDCLQIL 303 (780)
T ss_dssp HHHHHGGGCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCHHHHHHHHHHHHHH
Confidence 9999998875437777777777644
No 29
>3nmw_A APC variant protein; ARMADIILO repeats domain, cell adhesion-cell cycle complex; 1.60A {Homo sapiens} PDB: 3nmx_A 3t7u_A 3au3_A 3qhe_A
Probab=97.78 E-value=0.00015 Score=60.32 Aligned_cols=100 Identities=15% Similarity=0.083 Sum_probs=88.3
Q ss_pred HHHHhhhhhhhhhcc---CCHHHHhhhhhccHHHHHHHHhcCCCcccchhhhhhhhhhhhcChHHHHHHhhhhHHHHHHH
Q psy4702 27 ETACAAAGALAMLTS---VSTPVCSMLLEKNWVDIFKQILAHPDVGVQHRALVIVGNILSAGKELAERVLSTELMEILMA 103 (138)
Q Consensus 27 ~tr~AA~GALAmLT~---~~~~~c~~I~~~~wleil~~L~~~~~~~lqHRG~viv~Nmi~a~~e~a~kl~es~~leiL~~ 103 (138)
..+..|.|+|..|++ .++.....|.+...+..|..|+.+++.++|-.++-++.|+...+.+..+.+++.|++..|..
T Consensus 233 ~v~~~A~~aL~nLs~~~a~~~~~~~~i~~~g~i~~Lv~lL~~~~~~v~~~A~~aL~nLa~~~~~~~~~i~~~G~i~~Lv~ 312 (354)
T 3nmw_A 233 AIIESGGGILRNVSSLIATNEDHRQILRENNCLQTLLQHLKSHSLTIVSNACGTLWNLSARNPKDQEALWDMGAVSMLKN 312 (354)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHTTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTSSCHHHHHHHHHTTHHHHHHT
T ss_pred HHHHHHHHHHHHHHhhccCCHHHHHHHHHcCCHHHHHHHHcCCChHHHHHHHHHHHHHhCCCHHHHHHHHHCCCHHHHHH
Confidence 578889999999985 36777777777778999999999999999999999999998778888899999999999999
Q ss_pred hhccccHHHHHHHHHHHHHHHhC
Q psy4702 104 LTLLEGEEVRKLALQALAKGEEY 126 (138)
Q Consensus 104 ~~k~~~~~v~~~a~eaLk~~~~~ 126 (138)
+.+..+.++++.|..+|.-+...
T Consensus 313 LL~s~~~~i~~~A~~aL~nL~~~ 335 (354)
T 3nmw_A 313 LIHSKHKMIAMGSAAALRNLMAN 335 (354)
T ss_dssp TTTCSSHHHHHHHHHHHHHHHTT
T ss_pred HHhCCCHHHHHHHHHHHHHHHcC
Confidence 98776558899999999988865
No 30
>3nmz_A APC variant protein; protein-protein complex, armadillo repeats, cell adhesion-CE complex; 3.01A {Homo sapiens}
Probab=97.67 E-value=0.00025 Score=61.27 Aligned_cols=101 Identities=15% Similarity=0.079 Sum_probs=89.1
Q ss_pred HHHHhhhhhhhhhcc---CCHHHHhhhhhccHHHHHHHHhcCCCcccchhhhhhhhhhhhcChHHHHHHhhhhHHHHHHH
Q psy4702 27 ETACAAAGALAMLTS---VSTPVCSMLLEKNWVDIFKQILAHPDVGVQHRALVIVGNILSAGKELAERVLSTELMEILMA 103 (138)
Q Consensus 27 ~tr~AA~GALAmLT~---~~~~~c~~I~~~~wleil~~L~~~~~~~lqHRG~viv~Nmi~a~~e~a~kl~es~~leiL~~ 103 (138)
..+..|.|+|..|++ .++.....|.+...++.|..|+.+++.++|-.++-++.|+...+.+....+++.|++..|..
T Consensus 349 ~v~~~A~~aL~nLs~~~a~~~~~~~~i~~~G~i~~Lv~LL~~~~~~v~~~A~~aL~nLa~~~~~~~~~i~~~G~I~~Lv~ 428 (458)
T 3nmz_A 349 AIIESGGGILRNVSSLIATNEDHRQILRENNCLQTLLQHLKSHSLTIVSNACGTLWNLSARNPKDQEALWDMGAVSMLKN 428 (458)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHSSCSCHHHHHHHHHHHHHHHSSCHHHHHHHHHHTHHHHHHT
T ss_pred HHHHHHHHHHHHHHhcccCCHHHHHHHHHcccHHHHHHHHcCCChHHHHHHHHHHHHHHcCCHHHHHHHHHCCCHHHHHH
Confidence 578889999999984 36887777777778999999999999999999999999998888888899999999999999
Q ss_pred hhccccHHHHHHHHHHHHHHHhCC
Q psy4702 104 LTLLEGEEVRKLALQALAKGEEYG 127 (138)
Q Consensus 104 ~~k~~~~~v~~~a~eaLk~~~~~g 127 (138)
+.+..+.++++.|..+|.-+....
T Consensus 429 LL~s~~~~v~~~Aa~AL~nL~~~~ 452 (458)
T 3nmz_A 429 LIHSKHKMIAMGSAAALRNLMANR 452 (458)
T ss_dssp TTTCSSHHHHHHHHHHHHHHHTCC
T ss_pred HHhCCCHHHHHHHHHHHHHHHcCC
Confidence 987655588999999999988765
No 31
>3now_A UNC-45 protein, SD10334P; armadillo repeat, HSP90, myosin, tetra-tricopeptide repeat, binding protein required for myosin function; 2.99A {Drosophila melanogaster}
Probab=97.67 E-value=0.00018 Score=66.59 Aligned_cols=105 Identities=18% Similarity=0.132 Sum_probs=87.9
Q ss_pred hhcCC-CCHHHHHhhhhhhhhhccCCHHHHhhhhh-ccHHHHHHHHhcCCCcccchhhhhhhhhhhhcCh----------
Q psy4702 19 LLTCE-EDTETACAAAGALAMLTSVSTPVCSMLLE-KNWVDIFKQILAHPDVGVQHRALVIVGNILSAGK---------- 86 (138)
Q Consensus 19 ll~~e-ED~~tr~AA~GALAmLT~~~~~~c~~I~~-~~wleil~~L~~~~~~~lqHRG~viv~Nmi~a~~---------- 86 (138)
+|+.. .|.+.+.-|.++|+.||. ++.++..+.. ...+..|..|+.++++.+||-++.++.|+..++.
T Consensus 385 lL~~~~~d~~v~~~AveaLayLS~-~~~vk~~lv~d~g~Ip~LV~LL~s~d~~i~~~al~~L~NLt~~~d~q~~~~~l~~ 463 (810)
T 3now_A 385 FLIKPGKDKDIRRWAADGLAYLTL-DAECKEKLIEDKASIHALMDLARGGNQSCLYGVVTTFVNLCNAYEKQEMLPEMIE 463 (810)
T ss_dssp HHHCSSCCSSHHHHHHHHHHHHTT-SHHHHHHHHHCHHHHHHHHHHHHTTCGGGHHHHHHHHHHHTTCSCCCCCCCSCGG
T ss_pred HhcCCCCCHHHHHHHHHHHHHHhC-CcHHHHHHHHccchHHHHHHHhCCCChHHHHHHHHHHHHHcCCchhhhhhHHHHH
Confidence 33443 377899999999999998 8999999998 8899999999999999999999999999987431
Q ss_pred -------------------HH---HHHHhhhhHHHHHHHhhccccHHHHHHHHHHHHHHH
Q psy4702 87 -------------------EL---AERVLSTELMEILMALTLLEGEEVRKLALQALAKGE 124 (138)
Q Consensus 87 -------------------e~---a~kl~es~~leiL~~~~k~~~~~v~~~a~eaLk~~~ 124 (138)
.+ .+.++++|++..|..+.+.+...+++.|..+|--+.
T Consensus 464 la~~s~~~v~~~~~ld~~~~v~~r~~~VveaGaVp~LV~LL~s~s~~vqe~Aa~aL~NLA 523 (810)
T 3now_A 464 LAKFAKQHIPEEHELDDVDFINKRITVLANEGITTALCALAKTESHNSQELIARVLNAVC 523 (810)
T ss_dssp GTTTTCCSCCCSSCHHHHHHHHHHHHHHHHTTHHHHHHHHHTCCCHHHHHHHHHHHHHHH
T ss_pred HHHHhhccCccccccccHHHHHHHHHHHHHCcCHHHHHHHHcCCCHHHHHHHHHHHHHHc
Confidence 12 267899999999999998765588888888876654
No 32
>3l6x_A Catenin delta-1; catenin, armadillo, ARM, JMD, CE adhesion, complex, cell-CELL adhesion, ARVCF, delta-catenin DP120, JAC-1, cell membrane, membrane; 2.40A {Homo sapiens} PDB: 3l6y_A
Probab=97.62 E-value=0.00034 Score=62.56 Aligned_cols=109 Identities=14% Similarity=0.077 Sum_probs=88.8
Q ss_pred hhhhhhhcCCCCHHHHHhhhhhhhhhccCCHHHHhhhhhccHHHHHHHHhcCCCcccchhhhhhhhhhhhc-ChHHHHHH
Q psy4702 14 VRFLFLLTCEEDTETACAAAGALAMLTSVSTPVCSMLLEKNWVDIFKQILAHPDVGVQHRALVIVGNILSA-GKELAERV 92 (138)
Q Consensus 14 lklLvll~~eED~~tr~AA~GALAmLT~~~~~~c~~I~~~~wleil~~L~~~~~~~lqHRG~viv~Nmi~a-~~e~a~kl 92 (138)
+..+|-+-...|+..+..|+.+|..|+.-++..-..|.+..+++.|..|+.++++++|..++-.++|+... +.+.-..+
T Consensus 50 i~~LV~~L~s~~~~~q~~Aa~~L~~La~~~~~~k~~V~~~G~Ip~LV~LL~s~~~~vq~~Aa~AL~nLa~~~~~~nk~~I 129 (584)
T 3l6x_A 50 LPEVIAMLGFRLDAVKSNAAAYLQHLCYRNDKVKTDVRKLKGIPVLVGLLDHPKKEVHLGACGALKNISFGRDQDNKIAI 129 (584)
T ss_dssp HHHHHHHTTCSCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHGGGCSSHHHHHHHHHHHHHHTSSSCHHHHHHH
T ss_pred HHHHHHHHCCCCHHHHHHHHHHHHHHHcCChHHHHHHHHcCCcHHHHHHHCCCCHHHHHHHHHHHHHHHccCCHHHHHHH
Confidence 45566666778899999999999999964566666677788999999999999999999999999999875 57888889
Q ss_pred hhhhHHHHHHHhhccccH-HHHHHHHHHHHH
Q psy4702 93 LSTELMEILMALTLLEGE-EVRKLALQALAK 122 (138)
Q Consensus 93 ~es~~leiL~~~~k~~~~-~v~~~a~eaLk~ 122 (138)
++.|++..|..+.+.+.. ++.+.|..||--
T Consensus 130 ~~~GaIp~LV~LL~s~~~~~~~e~aa~aL~n 160 (584)
T 3l6x_A 130 KNCDGVPALVRLLRKARDMDLTEVITGTLWN 160 (584)
T ss_dssp HHTTHHHHHHHHHHHCCSHHHHHHHHHHHHH
T ss_pred HHcCCHHHHHHHHcCCCCHHHHHHHHHHHHH
Confidence 999999999999886433 556666655543
No 33
>1xm9_A Plakophilin 1; armadillo repeat, cell adhesion; 2.80A {Homo sapiens} SCOP: a.118.1.24
Probab=97.43 E-value=0.00063 Score=57.10 Aligned_cols=91 Identities=22% Similarity=0.181 Sum_probs=77.8
Q ss_pred hhhhhhhcCCCCHHHHHhhhhhhhhhccCCHHHHhhhhhccHHHHHHHHhc-CCCcccchhhhhhhhhhhhcChHHHHHH
Q psy4702 14 VRFLFLLTCEEDTETACAAAGALAMLTSVSTPVCSMLLEKNWVDIFKQILA-HPDVGVQHRALVIVGNILSAGKELAERV 92 (138)
Q Consensus 14 lklLvll~~eED~~tr~AA~GALAmLT~~~~~~c~~I~~~~wleil~~L~~-~~~~~lqHRG~viv~Nmi~a~~e~a~kl 92 (138)
+..|+-+-..+|+..+..|.+||..|+..++.....|.+..+++.|..|+. ++++++|..++-++.|+... .+....+
T Consensus 46 i~~Lv~lL~s~~~~~~~~A~~aL~nLa~~~~~~k~~i~~~G~i~~Lv~lL~~~~~~~~~~~a~~aL~nLa~~-~~~~~~i 124 (457)
T 1xm9_A 46 ICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLETRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSST-DELKEEL 124 (457)
T ss_dssp HHHHHHHTTSSCHHHHHHHHHHHHHHHSSCHHHHHHHHHTTCHHHHHHHHTTCCCHHHHHHHHHHHHHHHTS-SSTHHHH
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHcCCHHHHHHHHhhCCCHHHHHHHHHHHHHHhcC-HHhHHHH
Confidence 345666666789999999999999999844888888888889999999999 89999999999999999876 4566778
Q ss_pred hhhhHHHHHHHhhc
Q psy4702 93 LSTELMEILMALTL 106 (138)
Q Consensus 93 ~es~~leiL~~~~k 106 (138)
++ |++..|..+..
T Consensus 125 ~~-g~i~~Lv~ll~ 137 (457)
T 1xm9_A 125 IA-DALPVLADRVI 137 (457)
T ss_dssp HH-HHHHHHHHHTT
T ss_pred Hh-ccHHHHHHHHh
Confidence 88 99999999983
No 34
>3nmw_A APC variant protein; ARMADIILO repeats domain, cell adhesion-cell cycle complex; 1.60A {Homo sapiens} PDB: 3nmx_A 3t7u_A 3au3_A 3qhe_A
Probab=97.40 E-value=0.0014 Score=54.32 Aligned_cols=105 Identities=11% Similarity=-0.007 Sum_probs=84.5
Q ss_pred hcCCCCHHHHHhhhhhhhhhccCCHHHHhhhhh-ccHHHHHHHHhcCCCcc----cchhhhhhhhhhhh---cChHHHHH
Q psy4702 20 LTCEEDTETACAAAGALAMLTSVSTPVCSMLLE-KNWVDIFKQILAHPDVG----VQHRALVIVGNILS---AGKELAER 91 (138)
Q Consensus 20 l~~eED~~tr~AA~GALAmLT~~~~~~c~~I~~-~~wleil~~L~~~~~~~----lqHRG~viv~Nmi~---a~~e~a~k 91 (138)
|....|..++..|.+||.-|++..+.....|.. ...++.|..|+.++++. ++..++-+++|+-. .+.+.-+.
T Consensus 179 L~~~~~~~~~~~A~~aL~nLs~~~~~nk~~i~~~~Gai~~Lv~lL~~~~~~~~~~v~~~A~~aL~nLs~~~a~~~~~~~~ 258 (354)
T 3nmw_A 179 ALEVKKESTLKSVLSALWNLSAHCTENKADICAVDGALAFLVGTLTYRSQTNTLAIIESGGGILRNVSSLIATNEDHRQI 258 (354)
T ss_dssp HHHCCCHHHHHHHHHHHHHHHTTCHHHHHHHHHSTTHHHHHHHHTTCCCSSSCCHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HhcCCCHHHHHHHHHHHHHHHccChhhhHHHHHhcCcHHHHHHHhccCCCcccHHHHHHHHHHHHHHHhhccCCHHHHHH
Confidence 345568889999999999998745666778875 88999999999987764 88889999999976 56777788
Q ss_pred HhhhhHHHHHHHhhccccHHHHHHHHHHHHHHH
Q psy4702 92 VLSTELMEILMALTLLEGEEVRKLALQALAKGE 124 (138)
Q Consensus 92 l~es~~leiL~~~~k~~~~~v~~~a~eaLk~~~ 124 (138)
+++.|++..|..+.+....++++.|..+|--+.
T Consensus 259 i~~~g~i~~Lv~lL~~~~~~v~~~A~~aL~nLa 291 (354)
T 3nmw_A 259 LRENNCLQTLLQHLKSHSLTIVSNACGTLWNLS 291 (354)
T ss_dssp HHTTTHHHHHHHHTTCSCHHHHHHHHHHHHHHT
T ss_pred HHHcCCHHHHHHHHcCCChHHHHHHHHHHHHHh
Confidence 999999999999988654477777777765543
No 35
>3opb_A SWI5-dependent HO expression protein 4; heat and arm fold, myosin folding and function, myosin bindi protein, protein binding; 2.90A {Saccharomyces cerevisiae}
Probab=97.37 E-value=0.00089 Score=62.11 Aligned_cols=112 Identities=18% Similarity=0.143 Sum_probs=94.2
Q ss_pred hhhhhhcCCCCHHHHHhhhhhhhhhccCCHHHH-hhhhh---cc---HHHHHHHHhcCCCcccchhhhhhhhhhhhcChH
Q psy4702 15 RFLFLLTCEEDTETACAAAGALAMLTSVSTPVC-SMLLE---KN---WVDIFKQILAHPDVGVQHRALVIVGNILSAGKE 87 (138)
Q Consensus 15 klLvll~~eED~~tr~AA~GALAmLT~~~~~~c-~~I~~---~~---wleil~~L~~~~~~~lqHRG~viv~Nmi~a~~e 87 (138)
..+.-|...+....|+||.-+++-|++ ++... .++++ ++ .+++|..|+..+|+++|.-+.-.+.|+..++..
T Consensus 609 ~~L~~LL~s~n~~VrrAA~elI~NL~~-~~e~i~~k~~~~~~~~~~~rL~lLV~Ll~s~D~~~r~AAagALAnLts~~~~ 687 (778)
T 3opb_A 609 STIENLMLDENVPLQRSTLELISNMMS-HPLTIAAKFFNLENPQSLRNFNILVKLLQLSDVESQRAVAAIFANIATTIPL 687 (778)
T ss_dssp HHHHHGGGCSSHHHHHHHHHHHHHHHT-SGGGTGGGTSCCSSHHHHHHHHHHHHGGGCSCHHHHHHHHHHHHHHHHHCHH
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHhC-CcHHHHHHHHhhcCchhhccHHHHHHHHcCCCHHHHHHHHHHHHHhcCCChH
Confidence 345555566788999999999999998 68765 57775 22 589999999999999999999999999888999
Q ss_pred HHHHHhhh-hHHHHHHHhhcc--ccHHHHHHHHHHHHHHHhCC
Q psy4702 88 LAERVLST-ELMEILMALTLL--EGEEVRKLALQALAKGEEYG 127 (138)
Q Consensus 88 ~a~kl~es-~~leiL~~~~k~--~~~~v~~~a~eaLk~~~~~g 127 (138)
+++.+++. ++++.|..+.+. ++.+++..+.-++.-+.++.
T Consensus 688 ia~~ll~~~~gi~~Ll~lL~~~~~~~~l~~R~~~~l~NL~~~~ 730 (778)
T 3opb_A 688 IAKELLTKKELIENAIQVFADQIDDIELRQRLLMLFFGLFEVI 730 (778)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHccccHHHHHHHHhccCCCHHHHHHHHHHHHHHHHhh
Confidence 99999987 799999999888 44588899999998888754
No 36
>3l6x_A Catenin delta-1; catenin, armadillo, ARM, JMD, CE adhesion, complex, cell-CELL adhesion, ARVCF, delta-catenin DP120, JAC-1, cell membrane, membrane; 2.40A {Homo sapiens} PDB: 3l6y_A
Probab=97.19 E-value=0.0014 Score=58.60 Aligned_cols=110 Identities=18% Similarity=0.122 Sum_probs=89.8
Q ss_pred hhhhhhhcCCCCHHHHHhhhhhhhhhccCCHHHHhhhhhccHHHHHHHHhcCCC--------cccchhhhhhhhhhhhcC
Q psy4702 14 VRFLFLLTCEEDTETACAAAGALAMLTSVSTPVCSMLLEKNWVDIFKQILAHPD--------VGVQHRALVIVGNILSAG 85 (138)
Q Consensus 14 lklLvll~~eED~~tr~AA~GALAmLT~~~~~~c~~I~~~~wleil~~L~~~~~--------~~lqHRG~viv~Nmi~a~ 85 (138)
+..|+-|-...|.+.+.+|.+||..|+. ++.... ++....+.-|..|+.+++ ++++.-.+-.++|++..+
T Consensus 357 lp~Lv~LL~s~~~~v~~~A~~aL~nLs~-~~~~~~-~I~~g~ip~LV~LL~~~~~~~~~~~s~~v~~~a~~tL~NL~a~~ 434 (584)
T 3l6x_A 357 LSAIADLLTNEHERVVKAASGALRNLAV-DARNKE-LIGKHAIPNLVKNLPGGQQNSSWNFSEDTVISILNTINEVIAEN 434 (584)
T ss_dssp HHHHHHGGGCSCHHHHHHHHHHHHHHHT-TCSCHH-HHHHHHHHHHHHTSSSSSCSGGGTCCHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHhC-ChhHHH-HHHhCCHHHHHHHhcCCcccccccchHHHHHHHHHHHHHHhcCC
Confidence 6677777788899999999999999997 565544 447678888999998873 456666777899999999
Q ss_pred hHHHHHHhhhhHHHHHHHhhccc--cHHHHHHHHHHHHHHHh
Q psy4702 86 KELAERVLSTELMEILMALTLLE--GEEVRKLALQALAKGEE 125 (138)
Q Consensus 86 ~e~a~kl~es~~leiL~~~~k~~--~~~v~~~a~eaLk~~~~ 125 (138)
.+-++.+++.|++..|..+.+.. ...+.+.|-.+|.-+..
T Consensus 435 ~~~~~~I~~~g~I~~Lv~LL~s~~~~~~v~k~Aa~vL~nl~~ 476 (584)
T 3l6x_A 435 LEAAKKLRETQGIEKLVLINKSGNRSEKEVRAAALVLQTIWG 476 (584)
T ss_dssp HHHHHHHHHTTHHHHHHHHHTCSSSCHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHCCChHHHHHHHhCCCCChHHHHHHHHHHHHHHc
Confidence 99999999999999999999875 23888888888876654
No 37
>3nmz_A APC variant protein; protein-protein complex, armadillo repeats, cell adhesion-CE complex; 3.01A {Homo sapiens}
Probab=97.15 E-value=0.0032 Score=54.29 Aligned_cols=105 Identities=11% Similarity=-0.007 Sum_probs=84.3
Q ss_pred hcCCCCHHHHHhhhhhhhhhccCCHHHHhhhhh-ccHHHHHHHHhcCCCcc----cchhhhhhhhhhhh---cChHHHHH
Q psy4702 20 LTCEEDTETACAAAGALAMLTSVSTPVCSMLLE-KNWVDIFKQILAHPDVG----VQHRALVIVGNILS---AGKELAER 91 (138)
Q Consensus 20 l~~eED~~tr~AA~GALAmLT~~~~~~c~~I~~-~~wleil~~L~~~~~~~----lqHRG~viv~Nmi~---a~~e~a~k 91 (138)
|....|..++..|.+||.-|+...+.....|.. ...++.|..|+.++++. ++..++-+++|+-. .+.+.-+.
T Consensus 295 Ll~s~~~~v~~~A~~aL~nLs~~~~~nk~~I~~~~Gal~~Lv~LL~~~~~~~~~~v~~~A~~aL~nLs~~~a~~~~~~~~ 374 (458)
T 3nmz_A 295 ALEVKKESTLKSVLSALWNLSAHCTENKADICAVDGALAFLVGTLTYRSQTNTLAIIESGGGILRNVSSLIATNEDHRQI 374 (458)
T ss_dssp HTTCCSHHHHHHHHHHHHHHHHHCHHHHHHHHHSTTHHHHHHHHTTCCCSSSTTHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HhcCCCHHHHHHHHHHHHHHccCCHHHHHHHHHhcCcHHHHHHHhcCCCCcchHHHHHHHHHHHHHHHhcccCCHHHHHH
Confidence 455668889999999999998734566777875 88999999999987764 89999999999976 57777788
Q ss_pred HhhhhHHHHHHHhhccccHHHHHHHHHHHHHHH
Q psy4702 92 VLSTELMEILMALTLLEGEEVRKLALQALAKGE 124 (138)
Q Consensus 92 l~es~~leiL~~~~k~~~~~v~~~a~eaLk~~~ 124 (138)
+++.|++..|..+.+....++++.|..+|--+.
T Consensus 375 i~~~G~i~~Lv~LL~~~~~~v~~~A~~aL~nLa 407 (458)
T 3nmz_A 375 LRENNCLQTLLQHLKSHSLTIVSNACGTLWNLS 407 (458)
T ss_dssp HHHTTHHHHHHHHSSCSCHHHHHHHHHHHHHHH
T ss_pred HHHcccHHHHHHHHcCCChHHHHHHHHHHHHHH
Confidence 999999999999988654466677766665443
No 38
>3tt9_A Plakophilin-2; cell adhesion; 1.55A {Homo sapiens}
Probab=96.80 E-value=0.0026 Score=50.52 Aligned_cols=103 Identities=16% Similarity=0.126 Sum_probs=78.7
Q ss_pred hhcCCCCHHHHHhhhhhhhhhccCCHHHHhhhhhccHHHHHHHHhc----------------CCCcccchhhhhhhhhhh
Q psy4702 19 LLTCEEDTETACAAAGALAMLTSVSTPVCSMLLEKNWVDIFKQILA----------------HPDVGVQHRALVIVGNIL 82 (138)
Q Consensus 19 ll~~eED~~tr~AA~GALAmLT~~~~~~c~~I~~~~wleil~~L~~----------------~~~~~lqHRG~viv~Nmi 82 (138)
+|....|..++..|+|+|--|++ ++.....|.+. .+..|..+.. ..++++++-..-|++|+-
T Consensus 102 lL~~~~~~~~~e~a~~aL~nLS~-~~~~k~~i~~~-~i~~Lv~ll~~p~sG~~~~~~~~~~~~~~~~v~~na~~~L~nLs 179 (233)
T 3tt9_A 102 VLKQTRDLETKKQITGLLWNLSS-NDKLKNLMITE-ALLTLTENIIIPFSGWPEGDYPKANGLLDFDIFYNVTGCLRNMS 179 (233)
T ss_dssp HHHHCCCHHHHHHHHHHHHHHHT-SGGGHHHHHHH-HHHHHCCCCCHHHHCCCGGGCCCCCTTCCHHHHHHHHHHHHHHT
T ss_pred HHccCCCHHHHHHHHHHHHHHHc-ChhhHHHHHhc-cHHHHHHHHhccccCCcccccccccccchHHHHHHHHHHHHHHh
Confidence 44445788999999999999998 68888777763 5666655442 136689999999999999
Q ss_pred hcChHHHHHHhhh-hHHHHHHHhhccc----c-H-HHHHHHHHHHHHH
Q psy4702 83 SAGKELAERVLST-ELMEILMALTLLE----G-E-EVRKLALQALAKG 123 (138)
Q Consensus 83 ~a~~e~a~kl~es-~~leiL~~~~k~~----~-~-~v~~~a~eaLk~~ 123 (138)
.++.+.-+.+.+. |+++.|..+.+.. + . +.++-++-+|.-+
T Consensus 180 s~~~~~R~~~r~~~Gli~~Lv~~l~~~~~~~~~~~k~~En~v~~L~nL 227 (233)
T 3tt9_A 180 SAGADGRKAMRRCDGLIDSLVHYVRGTIADYQPDDKATENCVCILHNL 227 (233)
T ss_dssp TSCHHHHHHHHTSTTHHHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHCCCcHHHHHHHHHhhhhcccchhHHHHHHHHHHHHH
Confidence 8887877888876 5779999998763 1 2 7888888887643
No 39
>3ltj_A Alpharep-4; protein engineering, heat-like repeat, protein binding; 1.80A {Synthetic}
Probab=96.09 E-value=0.021 Score=41.32 Aligned_cols=98 Identities=21% Similarity=0.144 Sum_probs=51.3
Q ss_pred hhhhhhhcCCCCHHHHHhhhhhhhhhccCCHHHHhhhhh----------------------ccHHHHHHHHhcCCCcccc
Q psy4702 14 VRFLFLLTCEEDTETACAAAGALAMLTSVSTPVCSMLLE----------------------KNWVDIFKQILAHPDVGVQ 71 (138)
Q Consensus 14 lklLvll~~eED~~tr~AA~GALAmLT~~~~~~c~~I~~----------------------~~wleil~~L~~~~~~~lq 71 (138)
+..|+-+...+|+..|.+|..+|+.+.. +.+...+.. +..++.|..++.++++.+|
T Consensus 78 ~~~L~~~l~d~~~~vr~~a~~aL~~~~~--~~~~~~L~~~l~d~~~~vr~~a~~aL~~~~~~~~~~~L~~~l~d~~~~vr 155 (201)
T 3ltj_A 78 VEPLIKALKDEDGWVRQSAAVALGQIGD--ERAVEPLIKALKDEDWFVRIAAAFALGEIGDERAVEPLIKALKDEDGWVR 155 (201)
T ss_dssp HHHHHHHTTCSSHHHHHHHHHHHHHHCC--GGGHHHHHHHTTCSSHHHHHHHHHHHHHHTCGGGHHHHHHHTTCSSHHHH
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHhCc--HHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCHHHHHHHHHHHcCCCHHHH
Confidence 3444445556777788888877776543 211111111 1233344444444444454
Q ss_pred hhhhhhhhhhhhcChHHHHHHhhhhHHHHHHHhhccccHHHHHHHHHHHHHHH
Q psy4702 72 HRALVIVGNILSAGKELAERVLSTELMEILMALTLLEGEEVRKLALQALAKGE 124 (138)
Q Consensus 72 HRG~viv~Nmi~a~~e~a~kl~es~~leiL~~~~k~~~~~v~~~a~eaLk~~~ 124 (138)
...+-.+.++ -..+.++.|..+.+.++..|...|.++|..+.
T Consensus 156 ~~A~~aL~~~-----------~~~~~~~~L~~~l~d~~~~vr~~A~~aL~~l~ 197 (201)
T 3ltj_A 156 QSAADALGEI-----------GGERVRAAMEKLAETGTGFARKVAVNYLETHK 197 (201)
T ss_dssp HHHHHHHHHH-----------CSHHHHHHHHHHHHHCCHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHh-----------CchhHHHHHHHHHhCCCHHHHHHHHHHHHHHH
Confidence 4444444443 22345566666654443477788888877654
No 40
>3ltm_A Alpha-REP4; protein engineering, heat-like repeat, protein binding; HET: 1PE 12P; 2.15A {Synthetic}
Probab=96.05 E-value=0.026 Score=41.13 Aligned_cols=99 Identities=21% Similarity=0.143 Sum_probs=52.7
Q ss_pred hhhhhhhcCCCCHHHHHhhhhhhhhhccCCHHHHhhhhh----------------------ccHHHHHHHHhcCCCcccc
Q psy4702 14 VRFLFLLTCEEDTETACAAAGALAMLTSVSTPVCSMLLE----------------------KNWVDIFKQILAHPDVGVQ 71 (138)
Q Consensus 14 lklLvll~~eED~~tr~AA~GALAmLT~~~~~~c~~I~~----------------------~~wleil~~L~~~~~~~lq 71 (138)
+..|+-+...+|+..|.+|.-+|+.+.. +.....+.+ +..++.|..++.|+++.+|
T Consensus 83 ~~~L~~~l~~~~~~vr~~a~~aL~~~~~--~~~~~~L~~~l~d~~~~vr~~a~~aL~~~~~~~~~~~L~~~l~d~~~~vr 160 (211)
T 3ltm_A 83 VEPLIKALKDEDGWVRQSAAVALGQIGD--ERAVEPLIKALKDEDWFVRIAAAFALGEIGDERAVEPLIKALKDEDGWVR 160 (211)
T ss_dssp HHHHHHHTTCSSHHHHHHHHHHHHHHCC--GGGHHHHHHHTTCSSHHHHHHHHHHHHHHCCGGGHHHHHHHTTCSSHHHH
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHhCc--HHHHHHHHHHHhCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHcCCCHHHH
Confidence 3445555566777788888777776543 211111111 1233444444445555554
Q ss_pred hhhhhhhhhhhhcChHHHHHHhhhhHHHHHHHhhccccHHHHHHHHHHHHHHHh
Q psy4702 72 HRALVIVGNILSAGKELAERVLSTELMEILMALTLLEGEEVRKLALQALAKGEE 125 (138)
Q Consensus 72 HRG~viv~Nmi~a~~e~a~kl~es~~leiL~~~~k~~~~~v~~~a~eaLk~~~~ 125 (138)
...+-.+.++ -..+.++.|..+.+.++..|++.|.++|...-.
T Consensus 161 ~~a~~aL~~~-----------~~~~~~~~L~~~l~d~~~~vr~~A~~aL~~~~~ 203 (211)
T 3ltm_A 161 QSAADALGEI-----------GGERVRAAMEKLAETGTGFARKVAVNYLETHKS 203 (211)
T ss_dssp HHHHHHHHHH-----------CSHHHHHHHHHHHHHCCHHHHHHHHHHHHC---
T ss_pred HHHHHHHHHh-----------CchhHHHHHHHHHhCCCHHHHHHHHHHHHhcCC
Confidence 4444444443 234566677777665444888888888876654
No 41
>1te4_A Conserved protein MTH187; methanobacterium thermoautotrophicum, structural proteomics, heat-like repeat; NMR {Methanothermobacterthermautotrophicus} SCOP: a.118.1.16
Probab=95.49 E-value=0.031 Score=38.61 Aligned_cols=86 Identities=19% Similarity=0.075 Sum_probs=45.0
Q ss_pred hhhhhhhcCCCCHHHHHhhhhhhhhhccCCHHHHhhhhhccHHHHHHHHhcCCCcccchhhhhhhhhhhhcChHHHHHHh
Q psy4702 14 VRFLFLLTCEEDTETACAAAGALAMLTSVSTPVCSMLLEKNWVDIFKQILAHPDVGVQHRALVIVGNILSAGKELAERVL 93 (138)
Q Consensus 14 lklLvll~~eED~~tr~AA~GALAmLT~~~~~~c~~I~~~~wleil~~L~~~~~~~lqHRG~viv~Nmi~a~~e~a~kl~ 93 (138)
+..|+-+..++|...|.+|.-+|+.+.. + ..++.|..++.|+++.+|+..+-.+.++-
T Consensus 44 ~~~L~~~L~d~~~~vR~~A~~aL~~~~~--~---------~a~~~L~~~L~d~~~~VR~~A~~aL~~~~----------- 101 (131)
T 1te4_A 44 FEPLLESLSNEDWRIRGAAAWIIGNFQD--E---------RAVEPLIKLLEDDSGFVRSGAARSLEQIG----------- 101 (131)
T ss_dssp HHHHHHGGGCSCHHHHHHHHHHHGGGCS--H---------HHHHHHHHHHHHCCTHHHHHHHHHHHHHC-----------
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHhcCC--H---------HHHHHHHHHHcCCCHHHHHHHHHHHHHhC-----------
Confidence 3444444444555566666655555432 2 22344444455666666665555554432
Q ss_pred hhhHHHHHHHhhccccHHHHHHHHHHHH
Q psy4702 94 STELMEILMALTLLEGEEVRKLALQALA 121 (138)
Q Consensus 94 es~~leiL~~~~k~~~~~v~~~a~eaLk 121 (138)
..+.++.|..+.+.++..|+..|.++|.
T Consensus 102 ~~~a~~~L~~~l~d~~~~vr~~A~~aL~ 129 (131)
T 1te4_A 102 GERVRAAMEKLAETGTGFARKVAVNYLE 129 (131)
T ss_dssp SHHHHHHHHHHTTSCCTHHHHHHHHHGG
T ss_pred cHHHHHHHHHHHhCCCHHHHHHHHHHHH
Confidence 2344566666654333367777777664
No 42
>3ltj_A Alpharep-4; protein engineering, heat-like repeat, protein binding; 1.80A {Synthetic}
Probab=94.91 E-value=0.16 Score=36.46 Aligned_cols=101 Identities=26% Similarity=0.129 Sum_probs=57.8
Q ss_pred ChhhhhhhhcCCCCHHHHHhhhhhhhhhcc-------------CCHHH----Hhhhhh---ccHHHHHHHHhcCCCcccc
Q psy4702 12 SQVRFLFLLTCEEDTETACAAAGALAMLTS-------------VSTPV----CSMLLE---KNWVDIFKQILAHPDVGVQ 71 (138)
Q Consensus 12 ~RlklLvll~~eED~~tr~AA~GALAmLT~-------------~~~~~----c~~I~~---~~wleil~~L~~~~~~~lq 71 (138)
+-+..|+-+...+|...|.+|.-+|+.+-. .++.+ +..+-. +..++.|..++.++++.+|
T Consensus 45 ~~~~~L~~~l~~~~~~vr~~a~~~L~~~~~~~~~~~L~~~l~d~~~~vr~~a~~aL~~~~~~~~~~~L~~~l~d~~~~vr 124 (201)
T 3ltj_A 45 RAVEPLIKALKDEDAWVRRAAADALGQIGDERAVEPLIKALKDEDGWVRQSAAVALGQIGDERAVEPLIKALKDEDWFVR 124 (201)
T ss_dssp GGHHHHHHHTTCSSHHHHHHHHHHHHHHCCGGGHHHHHHHTTCSSHHHHHHHHHHHHHHCCGGGHHHHHHHTTCSSHHHH
T ss_pred hHHHHHHHHHcCCCHHHHHHHHHHHHhhCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHhCcHHHHHHHHHHHcCCCHHHH
Confidence 345556666677899999999999887642 01111 111111 2345555555555555555
Q ss_pred hhhhhhhhhhhhcChHHHHHHhhhhHHHHHHHhhccccHHHHHHHHHHHHHH
Q psy4702 72 HRALVIVGNILSAGKELAERVLSTELMEILMALTLLEGEEVRKLALQALAKG 123 (138)
Q Consensus 72 HRG~viv~Nmi~a~~e~a~kl~es~~leiL~~~~k~~~~~v~~~a~eaLk~~ 123 (138)
...+-.+.++ -..+.++.|..+.+.++..|+..|.++|..+
T Consensus 125 ~~a~~aL~~~-----------~~~~~~~~L~~~l~d~~~~vr~~A~~aL~~~ 165 (201)
T 3ltj_A 125 IAAAFALGEI-----------GDERAVEPLIKALKDEDGWVRQSAADALGEI 165 (201)
T ss_dssp HHHHHHHHHH-----------TCGGGHHHHHHHTTCSSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHh-----------CCHHHHHHHHHHHcCCCHHHHHHHHHHHHHh
Confidence 5555554443 2345666677766554337777777777654
No 43
>3ltm_A Alpha-REP4; protein engineering, heat-like repeat, protein binding; HET: 1PE 12P; 2.15A {Synthetic}
Probab=94.73 E-value=0.18 Score=36.51 Aligned_cols=99 Identities=25% Similarity=0.139 Sum_probs=57.3
Q ss_pred ChhhhhhhhcCCCCHHHHHhhhhhhhhhccCCHHHHhh-------------------hhh---ccHHHHHHHHhcCCCcc
Q psy4702 12 SQVRFLFLLTCEEDTETACAAAGALAMLTSVSTPVCSM-------------------LLE---KNWVDIFKQILAHPDVG 69 (138)
Q Consensus 12 ~RlklLvll~~eED~~tr~AA~GALAmLT~~~~~~c~~-------------------I~~---~~wleil~~L~~~~~~~ 69 (138)
+-+..|+-+...+|...|.+|.-+|+.+.. +..... +-. +..++.|..++.|+++.
T Consensus 50 ~~~~~L~~~l~~~~~~vr~~a~~aL~~~~~--~~~~~~L~~~l~~~~~~vr~~a~~aL~~~~~~~~~~~L~~~l~d~~~~ 127 (211)
T 3ltm_A 50 RAVEPLIKALKDEDAWVRRAAADALGQIGD--ERAVEPLIKALKDEDGWVRQSAAVALGQIGDERAVEPLIKALKDEDWF 127 (211)
T ss_dssp GGHHHHHHHTTCSCHHHHHHHHHHHHHHCC--GGGHHHHHHHTTCSSHHHHHHHHHHHHHHCCGGGHHHHHHHTTCSSHH
T ss_pred cHHHHHHHHHcCCCHHHHHHHHHHHHhhCC--HHHHHHHHHHHcCCCHHHHHHHHHHHHHhCcHHHHHHHHHHHhCCCHH
Confidence 344556666667899999999999987643 211111 111 23455555555566666
Q ss_pred cchhhhhhhhhhhhcChHHHHHHhhhhHHHHHHHhhccccHHHHHHHHHHHHHH
Q psy4702 70 VQHRALVIVGNILSAGKELAERVLSTELMEILMALTLLEGEEVRKLALQALAKG 123 (138)
Q Consensus 70 lqHRG~viv~Nmi~a~~e~a~kl~es~~leiL~~~~k~~~~~v~~~a~eaLk~~ 123 (138)
+|+..+-.+.++- ..+.+..|..+.+.++..|+..|.++|..+
T Consensus 128 vr~~a~~aL~~~~-----------~~~~~~~L~~~l~d~~~~vr~~a~~aL~~~ 170 (211)
T 3ltm_A 128 VRIAAAFALGEIG-----------DERAVEPLIKALKDEDGWVRQSAADALGEI 170 (211)
T ss_dssp HHHHHHHHHHHHC-----------CGGGHHHHHHHTTCSSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcC-----------CHHHHHHHHHHHcCCCHHHHHHHHHHHHHh
Confidence 6555555555541 234566666666444336777777777654
No 44
>1b3u_A Protein (protein phosphatase PP2A); scaffold protein, phosphorylation, heat repeat; 2.30A {Homo sapiens} SCOP: a.118.1.2 PDB: 2ie4_A* 2ie3_A* 2npp_A* 3k7v_A* 3k7w_A* 3fga_A* 2pf4_A 2iae_A 2nym_A* 2nyl_A* 3dw8_A* 2pkg_A 3c5w_A
Probab=94.65 E-value=0.21 Score=40.85 Aligned_cols=102 Identities=19% Similarity=0.124 Sum_probs=55.8
Q ss_pred hhhhhcCCCCHHHHHhhhhhhhhhccCCHHHHhhhhhccHHHHHHHHhcCCCcccchhhhhhhhhhhhcChHHHHHHhhh
Q psy4702 16 FLFLLTCEEDTETACAAAGALAMLTSVSTPVCSMLLEKNWVDIFKQILAHPDVGVQHRALVIVGNILSAGKELAERVLST 95 (138)
Q Consensus 16 lLvll~~eED~~tr~AA~GALAmLT~~~~~~c~~I~~~~wleil~~L~~~~~~~lqHRG~viv~Nmi~a~~e~a~kl~es 95 (138)
++.-+...+|...|.+|.-+|..+....+. .-+.+..+.++..++.+++...|+-++-++.++...-++ . ...
T Consensus 91 ~L~~l~~~~~~~vR~~a~~~L~~l~~~~~~---~~~~~~l~~~l~~l~~~~~~~~R~~a~~~l~~~~~~~~~---~-~~~ 163 (588)
T 1b3u_A 91 PLESLATVEETVVRDKAVESLRAISHEHSP---SDLEAHFVPLVKRLAGGDWFTSRTSACGLFSVCYPRVSS---A-VKA 163 (588)
T ss_dssp HHHHHTTSSCHHHHHHHHHHHHHHHTTSCH---HHHHHTHHHHHHHHHTCSSHHHHHHHGGGHHHHTTTSCH---H-HHH
T ss_pred HHHHHHhCchHHHHHHHHHHHHHHHHHCCH---HHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHhcCH---H-HHH
Confidence 333445678889999999999888763322 111134566666666666666666666555555433221 1 123
Q ss_pred hHHHHHHHhhccccHHHHHHHHHHHHHHH
Q psy4702 96 ELMEILMALTLLEGEEVRKLALQALAKGE 124 (138)
Q Consensus 96 ~~leiL~~~~k~~~~~v~~~a~eaLk~~~ 124 (138)
.++.+|..+.+.+...|+..|.++|..+.
T Consensus 164 ~l~~~l~~l~~d~~~~VR~~a~~~l~~l~ 192 (588)
T 1b3u_A 164 ELRQYFRNLCSDDTPMVRRAAASKLGEFA 192 (588)
T ss_dssp HHHHHHHHHHTCSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCHHHHHHHHHHHHHHH
Confidence 34555554443332255555555555443
No 45
>4gmo_A Putative uncharacterized protein; ARM, heat, solenoid, nuclear transport, chaperone, RPL5, RPL KAP104, nucleus; 2.10A {Chaetomium thermophilum var} PDB: 4gmn_A
Probab=94.51 E-value=0.053 Score=48.08 Aligned_cols=83 Identities=16% Similarity=0.266 Sum_probs=68.3
Q ss_pred CCCCHHHHHhhhhhhhhhccCCHHHHhhhhh-ccHHHHH-HHHhcCCCcccchhhhhhhhhhhh-cChHHHHHHhhhhHH
Q psy4702 22 CEEDTETACAAAGALAMLTSVSTPVCSMLLE-KNWVDIF-KQILAHPDVGVQHRALVIVGNILS-AGKELAERVLSTELM 98 (138)
Q Consensus 22 ~eED~~tr~AA~GALAmLT~~~~~~c~~I~~-~~wleil-~~L~~~~~~~lqHRG~viv~Nmi~-a~~e~a~kl~es~~l 98 (138)
...|...|..|.+||+-|.+ ++. +++.+. ++.+..+ ..++.|++.++|.-++-.++|+.. .+.+++..++..|++
T Consensus 44 ~S~~~~~r~~A~~al~~l~~-~~~-~~~l~~~~~~v~~ll~~lL~D~~~~Vr~~A~gaLrnL~~~~g~d~~~~l~~~~il 121 (684)
T 4gmo_A 44 KSPDAKSRTTAAGAIANIVQ-DAK-CRKLLLREQVVHIVLTETLTDNNIDSRAAGWEILKVLAQEEEADFCVHLYRLDVL 121 (684)
T ss_dssp SSSCCSHHHHHHHHHHHHTT-SHH-HHHHHHHTTHHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHSCHHHHHHHHHTTHH
T ss_pred CCCCHHHHHHHHHHHHHHHc-CcH-HHHHHHHcCCHHHHHHHHcCCCCHHHHHHHHHHHHHHHhhcCchHHHHHHHcChH
Confidence 35788899999999999987 555 555555 8888765 567899999999999999999975 467999999999998
Q ss_pred HHHHHhhc
Q psy4702 99 EILMALTL 106 (138)
Q Consensus 99 eiL~~~~k 106 (138)
--|..+.+
T Consensus 122 ~~L~~~l~ 129 (684)
T 4gmo_A 122 TAIEHAAK 129 (684)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 88877754
No 46
>1b3u_A Protein (protein phosphatase PP2A); scaffold protein, phosphorylation, heat repeat; 2.30A {Homo sapiens} SCOP: a.118.1.2 PDB: 2ie4_A* 2ie3_A* 2npp_A* 3k7v_A* 3k7w_A* 3fga_A* 2pf4_A 2iae_A 2nym_A* 2nyl_A* 3dw8_A* 2pkg_A 3c5w_A
Probab=94.33 E-value=0.19 Score=41.11 Aligned_cols=98 Identities=16% Similarity=0.136 Sum_probs=61.5
Q ss_pred cCCCCHHHHHhhhhhhhhhccCCHHHHhhhhhccHHHHHHHHhcCCCcccchhhhhhhhhhhhcChHHHHHHhhhhHHHH
Q psy4702 21 TCEEDTETACAAAGALAMLTSVSTPVCSMLLEKNWVDIFKQILAHPDVGVQHRALVIVGNILSAGKELAERVLSTELMEI 100 (138)
Q Consensus 21 ~~eED~~tr~AA~GALAmLT~~~~~~c~~I~~~~wleil~~L~~~~~~~lqHRG~viv~Nmi~a~~e~a~kl~es~~lei 100 (138)
...++..+|.+|..++..+... +-...+.+..++.|..++.|+++++|...+-++..+...-+ ..+....++..
T Consensus 489 ~~~~~~~~R~~a~~~l~~l~~~---~~~~~~~~~~~~~l~~~l~d~~~~Vr~~a~~~l~~l~~~~~---~~~~~~~~~p~ 562 (588)
T 1b3u_A 489 SGDPNYLHRMTTLFCINVLSEV---CGQDITTKHMLPTVLRMAGDPVANVRFNVAKSLQKIGPILD---NSTLQSEVKPI 562 (588)
T ss_dssp TTCSCHHHHHHHHHHHHHHHHH---HHHHHHHHHTHHHHHHGGGCSCHHHHHHHHHHHHHHGGGSC---HHHHHHHHHHH
T ss_pred hhCCCHHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHhhCCCCCchHHHHHHHHHHHHHHHhc---hhhhHHHHHHH
Confidence 3344555666655555554331 11111114567788888889999999888888888875432 23334556677
Q ss_pred HHHhhccccHHHHHHHHHHHHHHH
Q psy4702 101 LMALTLLEGEEVRKLALQALAKGE 124 (138)
Q Consensus 101 L~~~~k~~~~~v~~~a~eaLk~~~ 124 (138)
|..+...++..|++.|.+||..+.
T Consensus 563 l~~l~~d~d~~vr~~a~~al~~l~ 586 (588)
T 1b3u_A 563 LEKLTQDQDVDVKYFAQEALTVLS 586 (588)
T ss_dssp HHHHTTCSSHHHHHHHHHHHHHTT
T ss_pred HHHHcCCCchhHHHHHHHHHHHhh
Confidence 777644333499999999998764
No 47
>1oyz_A Hypothetical protein YIBA; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.10A {Escherichia coli} SCOP: a.118.1.16
Probab=93.70 E-value=0.28 Score=37.05 Aligned_cols=60 Identities=17% Similarity=0.218 Sum_probs=31.8
Q ss_pred HHHHHHHHhcCCCcccchhhhhhhhhhhhcChHHHHHHhhhhHHHHHHHhhccccHHHHHHHHHHHHHH
Q psy4702 55 WVDIFKQILAHPDVGVQHRALVIVGNILSAGKELAERVLSTELMEILMALTLLEGEEVRKLALQALAKG 123 (138)
Q Consensus 55 wleil~~L~~~~~~~lqHRG~viv~Nmi~a~~e~a~kl~es~~leiL~~~~k~~~~~v~~~a~eaLk~~ 123 (138)
.++.|..++.|+++.+|+..+..+.++-..+ .+.++.|..+.+.++..|...|..+|...
T Consensus 160 ~~~~L~~~l~d~~~~vr~~a~~aL~~~~~~~---------~~~~~~L~~~l~d~~~~vR~~A~~aL~~~ 219 (280)
T 1oyz_A 160 TIPLLINLLKDPNGDVRNWAAFAININKYDN---------SDIRDCFVEMLQDKNEEVRIEAIIGLSYR 219 (280)
T ss_dssp CHHHHHHHHTCSSHHHHHHHHHHHHHHTCCC---------HHHHHHHHHHTTCSCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHhhccCc---------HHHHHHHHHHhcCCCHHHHHHHHHHHHHh
Confidence 4556666666666666666666665542112 23344455554433335666666665543
No 48
>1oyz_A Hypothetical protein YIBA; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.10A {Escherichia coli} SCOP: a.118.1.16
Probab=92.99 E-value=0.37 Score=36.39 Aligned_cols=58 Identities=16% Similarity=0.110 Sum_probs=39.6
Q ss_pred hhhhhhhcCCCCHHHHHhhhhhhhhhccCCHHHHhhhhhccHHHHHHHHhcCCCcccchhhhhhhhhhh
Q psy4702 14 VRFLFLLTCEEDTETACAAAGALAMLTSVSTPVCSMLLEKNWVDIFKQILAHPDVGVQHRALVIVGNIL 82 (138)
Q Consensus 14 lklLvll~~eED~~tr~AA~GALAmLT~~~~~~c~~I~~~~wleil~~L~~~~~~~lqHRG~viv~Nmi 82 (138)
+..|+-+...+|+..|.+|.-+|.-+.+ +. -++.|..++.++++.+|..++..+.++-
T Consensus 25 i~~L~~~L~~~~~~vr~~A~~~L~~~~~--~~---------~~~~L~~~l~d~~~~vR~~A~~aL~~l~ 82 (280)
T 1oyz_A 25 DDELFRLLDDHNSLKRISSARVLQLRGG--QD---------AVRLAIEFCSDKNYIRRDIGAFILGQIK 82 (280)
T ss_dssp HHHHHHHTTCSSHHHHHHHHHHHHHHCC--HH---------HHHHHHHHHTCSSHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHccCC--ch---------HHHHHHHHHcCCCHHHHHHHHHHHHHhc
Confidence 3445555566888999999998887653 32 3455666777777777777777766654
No 49
>1te4_A Conserved protein MTH187; methanobacterium thermoautotrophicum, structural proteomics, heat-like repeat; NMR {Methanothermobacterthermautotrophicus} SCOP: a.118.1.16
Probab=92.81 E-value=0.11 Score=35.71 Aligned_cols=85 Identities=19% Similarity=0.119 Sum_probs=57.0
Q ss_pred hhhhhcCCCCHHHHHhhhhhhhhhccCCHHHHhhhhhccHHHHHHHHhcCCCcccchhhhhhhhhhhhcChHHHHHHhhh
Q psy4702 16 FLFLLTCEEDTETACAAAGALAMLTSVSTPVCSMLLEKNWVDIFKQILAHPDVGVQHRALVIVGNILSAGKELAERVLST 95 (138)
Q Consensus 16 lLvll~~eED~~tr~AA~GALAmLT~~~~~~c~~I~~~~wleil~~L~~~~~~~lqHRG~viv~Nmi~a~~e~a~kl~es 95 (138)
.++.+...+|...|.+|.-+|+.+-. + . ++.|..++.|+++.+|...+..+.++-. .
T Consensus 16 ~l~~~L~~~~~~vR~~A~~~L~~~~~--~---------~-~~~L~~~L~d~~~~vR~~A~~aL~~~~~-----------~ 72 (131)
T 1te4_A 16 PRGSHMADENKWVRRDVSTALSRMGD--E---------A-FEPLLESLSNEDWRIRGAAAWIIGNFQD-----------E 72 (131)
T ss_dssp -----CCSSCCCSSSSCCSSTTSCSS--T---------T-HHHHHHGGGCSCHHHHHHHHHHHGGGCS-----------H
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHhCc--h---------H-HHHHHHHHcCCCHHHHHHHHHHHHhcCC-----------H
Confidence 34555567888999999999987643 2 1 4677788889999999999988887642 2
Q ss_pred hHHHHHHHhhccccHHHHHHHHHHHHHH
Q psy4702 96 ELMEILMALTLLEGEEVRKLALQALAKG 123 (138)
Q Consensus 96 ~~leiL~~~~k~~~~~v~~~a~eaLk~~ 123 (138)
+.++.|..+.+.++..|+..|..+|..+
T Consensus 73 ~a~~~L~~~L~d~~~~VR~~A~~aL~~~ 100 (131)
T 1te4_A 73 RAVEPLIKLLEDDSGFVRSGAARSLEQI 100 (131)
T ss_dssp HHHHHHHHHHHHCCTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHh
Confidence 3455666655443337777777777654
No 50
>3grl_A General vesicular transport factor P115; vesicle transport, membrane trafficking, membrane tethering, fusion, snare, RAB GTPase, armadillo repeats; 2.00A {Bos taurus} PDB: 3gq2_A 2w3c_A
Probab=92.62 E-value=0.65 Score=42.42 Aligned_cols=114 Identities=18% Similarity=0.168 Sum_probs=91.7
Q ss_pred ChhhhhhhhcCCCCHHHHHhhhhhhhhhccCCHH-HHhhhhh-ccHHHHHHHHhcCCCcccchhhhhhhhhhhhcChHHH
Q psy4702 12 SQVRFLFLLTCEEDTETACAAAGALAMLTSVSTP-VCSMLLE-KNWVDIFKQILAHPDVGVQHRALVIVGNILSAGKELA 89 (138)
Q Consensus 12 ~RlklLvll~~eED~~tr~AA~GALAmLT~~~~~-~c~~I~~-~~wleil~~L~~~~~~~lqHRG~viv~Nmi~a~~e~a 89 (138)
+=+++|+-|-+++|+..|..|--.|..|....+. .=+.|+. +.++..|..++.++.+-+|.-++..+.++..++.++=
T Consensus 122 ~~i~~Ll~lL~~~df~vR~~alqlL~~L~~~r~~~~Q~~Il~~p~gi~~Lv~lL~d~rE~iRneallLL~~Lt~~n~~iQ 201 (651)
T 3grl_A 122 ENVTLLLSLLEEFDFHVRWPGVKLLTSLLKQLGPQVQQIILVSPMGVSRLMDLLADSREVIRNDGVLLLQALTRSNGAIQ 201 (651)
T ss_dssp HHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHSHHHHHHHHHHSTTHHHHHHGGGGCSSHHHHHHHHHHHHHHHTTCHHHH
T ss_pred ccHHHHHHHhcCccHHHHHHHHHHHHHHHhcCcHHHHHHHHhCcccHHHHHHHHhCchHHHHHHHHHHHHHHhcCCHHHH
Confidence 3467777777999999999999999888776777 5666776 9999999999999999999999999999999998887
Q ss_pred HHHhhhhHHHHHHHhhccccH----HHHHHHHHHHHHHHh
Q psy4702 90 ERVLSTELMEILMALTLLEGE----EVRKLALQALAKGEE 125 (138)
Q Consensus 90 ~kl~es~~leiL~~~~k~~~~----~v~~~a~eaLk~~~~ 125 (138)
+-+.-.|++|.|..+-+.+.. .|++-+-..|.-+..
T Consensus 202 klVAFEnaFe~Lf~Ii~~Eg~~~Ggivv~DCL~ll~nLLr 241 (651)
T 3grl_A 202 KIVAFENAFERLLDIITEEGNSDGGIVVEDCLILLQNLLK 241 (651)
T ss_dssp HHHHHTTHHHHHHHHHHHHTGGGSHHHHHHHHHHHHHHHT
T ss_pred HHHHHhccHHHHHHHHHhcCCCccchhHHHHHHHHHHHHh
Confidence 777777999999999887532 445544444544443
No 51
>3b2a_A TON_1937, putative uncharacterized protein; heat-repeats, hypothetical, unknown function; 2.20A {Thermococcus onnurineus}
Probab=92.05 E-value=0.28 Score=40.47 Aligned_cols=78 Identities=23% Similarity=0.238 Sum_probs=61.9
Q ss_pred ccHHHHHHHHhcCCCcccchhhhhhhhhhhhc-ChHHHHHHhhhhHHHHHHHhhccccHHHHHHHHHHHHHHHhCCCccC
Q psy4702 53 KNWVDIFKQILAHPDVGVQHRALVIVGNILSA-GKELAERVLSTELMEILMALTLLEGEEVRKLALQALAKGEEYGIIRR 131 (138)
Q Consensus 53 ~~wleil~~L~~~~~~~lqHRG~viv~Nmi~a-~~e~a~kl~es~~leiL~~~~k~~~~~v~~~a~eaLk~~~~~glIk~ 131 (138)
+.-+.+|..|+-++|+.++.|+++++-+|+.. ++..-...+ .++++-+..++|.++++|.=-|-+||+.+.+...+-|
T Consensus 32 e~~l~~L~~LL~dkD~~vk~raL~~LeellK~~~~~l~~~~~-e~~Ld~iI~llk~~dEkval~A~r~L~~LLe~vpL~~ 110 (265)
T 3b2a_A 32 KRALFLILELAGEDDETTRLRAFVALGEILKRADSDLRMMVL-ERHLDVFINALSQENEKVTIKALRALGYLVKDVPMGS 110 (265)
T ss_dssp HHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHSCHHHHHHHH-HHHHHHHHHTCCSTTHHHHHHHHHHHHHHHTTCCBCH
T ss_pred hhHHHHHHHHHhccchHHHHHHHHHHHHHHHhccccccHHHH-HHHHHHHHHHHhccchhHHHHHHHHHHHHHcCCCCCH
Confidence 67899999999999999999999999999974 454443333 3567777888877766877788899999988765543
No 52
>3dad_A FH1/FH2 domain-containing protein 1; formin, FHOD1, GTPase-binding domain, ubiquitin-superfold, armadillo repeats, actin-binding, coiled coil; 2.30A {Homo sapiens}
Probab=90.95 E-value=0.2 Score=42.42 Aligned_cols=66 Identities=17% Similarity=0.255 Sum_probs=57.8
Q ss_pred CCCcccchhhhhhhhhhhhcChHHHHHHhhhhHHHHHHHhhccccHHHHHHHHHHHHHHHhC-----CCcc
Q psy4702 65 HPDVGVQHRALVIVGNILSAGKELAERVLSTELMEILMALTLLEGEEVRKLALQALAKGEEY-----GIIR 130 (138)
Q Consensus 65 ~~~~~lqHRG~viv~Nmi~a~~e~a~kl~es~~leiL~~~~k~~~~~v~~~a~eaLk~~~~~-----glIk 130 (138)
+.+..-.-|.+.-+..++..|++.+.+|++.+++..|..+....+......+-.||..+|+| |+|+
T Consensus 129 ~~~~~~lr~aLfsLk~~~q~D~~Fa~EFI~~~GL~~Li~vi~~~~gN~q~Y~L~AL~~LM~~v~Gm~gvvs 199 (339)
T 3dad_A 129 SSSGPELRRSLFSLKQIFQEDKDLVPEFVHSEGLSCLIRVGAAADHNYQSYILRALGQLMLFVDGMLGVVA 199 (339)
T ss_dssp HCCHHHHHHHHHHHHHHHHTCTTHHHHHHHTTHHHHHHHHHTTSCHHHHHHHHHHHHHHTTSHHHHHHHHH
T ss_pred cCCcHHHHHHHHHHHHHhhcchHHHHHHHHhccHHHHHHHHHhcChHHHHHHHHHHHHHHhccccccchhC
Confidence 34444568999999999999999999999999999999998776557789999999999999 8886
No 53
>4fdd_A Transportin-1; heat repeats, karyopherin, nuclear import, protein transport importin, transportin, transport protein; 2.30A {Homo sapiens} PDB: 2ot8_A 2h4m_A 2z5k_A 2z5j_A 2qmr_A 2z5m_A 2z5n_A 2z5o_A 1qbk_B*
Probab=90.58 E-value=1 Score=39.77 Aligned_cols=102 Identities=11% Similarity=0.079 Sum_probs=70.6
Q ss_pred hcCCCCHHHHHhhhhhhhhhccCCHHHHhhhhh--ccHHHHHHHHhcCCCcccchhhhhhhhhhhhcChHHHHHHhhhhH
Q psy4702 20 LTCEEDTETACAAAGALAMLTSVSTPVCSMLLE--KNWVDIFKQILAHPDVGVQHRALVIVGNILSAGKELAERVLSTEL 97 (138)
Q Consensus 20 l~~eED~~tr~AA~GALAmLT~~~~~~c~~I~~--~~wleil~~L~~~~~~~lqHRG~viv~Nmi~a~~e~a~kl~es~~ 97 (138)
+...++...|.+|..+|..+....+ ..+.. +..++.+..++.++++++|...+-++.+++....+.-...++ ++
T Consensus 182 ~l~~~~~~vR~~A~~aL~~~~~~~~---~~~~~~~~~~l~~l~~~~~d~~~~vr~~a~~~L~~l~~~~~~~~~~~l~-~l 257 (852)
T 4fdd_A 182 FFKHSSPKIRSHAVACVNQFIISRT---QALMLHIDSFIENLFALAGDEEPEVRKNVCRALVMLLEVRMDRLLPHMH-NI 257 (852)
T ss_dssp TTTCSSHHHHHHHHHHHHTTTTTTC---HHHHTSHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHCHHHHGGGHH-HH
T ss_pred HhcCCCHHHHHHHHHHHHHHHhccc---HHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHH-HH
Confidence 3456788999999999986654222 22323 567777788888999999998999999998766544332222 46
Q ss_pred HHHHHHhhccccHHHHHHHHHHHHHHHh
Q psy4702 98 MEILMALTLLEGEEVRKLALQALAKGEE 125 (138)
Q Consensus 98 leiL~~~~k~~~~~v~~~a~eaLk~~~~ 125 (138)
++.+..+.+..+..|+..|.+++..+.+
T Consensus 258 ~~~l~~~~~~~~~~vr~~a~e~l~~l~~ 285 (852)
T 4fdd_A 258 VEYMLQRTQDQDENVALEACEFWLTLAE 285 (852)
T ss_dssp HHHHHHHHTCSSHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHccCCcHHHHHHHHHHHHHHhc
Confidence 7777777665444777888877776654
No 54
>4fdd_A Transportin-1; heat repeats, karyopherin, nuclear import, protein transport importin, transportin, transport protein; 2.30A {Homo sapiens} PDB: 2ot8_A 2h4m_A 2z5k_A 2z5j_A 2qmr_A 2z5m_A 2z5n_A 2z5o_A 1qbk_B*
Probab=90.36 E-value=0.6 Score=41.20 Aligned_cols=105 Identities=15% Similarity=0.025 Sum_probs=70.0
Q ss_pred hcCCCCHHHHHhhhhhhhhhccCCHHHHhhhhhccHHHHHHHHhcCCCcccchhhhhhhhhhhhcChHHHHHHhhhhHHH
Q psy4702 20 LTCEEDTETACAAAGALAMLTSVSTPVCSMLLEKNWVDIFKQILAHPDVGVQHRALVIVGNILSAGKELAERVLSTELME 99 (138)
Q Consensus 20 l~~eED~~tr~AA~GALAmLT~~~~~~c~~I~~~~wleil~~L~~~~~~~lqHRG~viv~Nmi~a~~e~a~kl~es~~le 99 (138)
+...+|...|.||.-+|..+.+..+......+ +..+..+..++.|+++.+|...+.++.++...-..-...-.-.+++.
T Consensus 367 ~l~~~~~~~R~aa~~alg~i~~~~~~~~~~~l-~~~l~~l~~~l~d~~~~Vr~~a~~~l~~l~~~~~~~~~~~~~~~ll~ 445 (852)
T 4fdd_A 367 LLFHHEWVVKESGILVLGAIAEGCMQGMIPYL-PELIPHLIQCLSDKKALVRSITCWTLSRYAHWVVSQPPDTYLKPLMT 445 (852)
T ss_dssp HHTCSSHHHHHHHHHHHHHTTTTTHHHHGGGH-HHHHHHHHHHTTCSSHHHHHHHHHHHHHTHHHHHHSCTTTTHHHHHH
T ss_pred HhcCCCHHHHHHHHHHHHHHHhcchHHHHHHH-HHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhccchHHHHHHHHHH
Confidence 33457899999999999999874333222111 67888999999999999999999999988643111000111234566
Q ss_pred HHHHhhccccHHHHHHHHHHHHHHHh
Q psy4702 100 ILMALTLLEGEEVRKLALQALAKGEE 125 (138)
Q Consensus 100 iL~~~~k~~~~~v~~~a~eaLk~~~~ 125 (138)
.|....+.+...|++.|..+|..+.+
T Consensus 446 ~L~~~L~d~~~~vr~~a~~aL~~l~~ 471 (852)
T 4fdd_A 446 ELLKRILDSNKRVQEAACSAFATLEE 471 (852)
T ss_dssp HHHHHHTCSSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHH
Confidence 66665544433788888888876653
No 55
>2qk2_A LP04448P; mini spindles, MSPS, XMAP215, DIS1, STU2, heat repeat, micro plus END, +TIP, protein binding; 2.10A {Drosophila melanogaster}
Probab=90.35 E-value=0.66 Score=34.68 Aligned_cols=101 Identities=11% Similarity=-0.027 Sum_probs=67.8
Q ss_pred hcCCCCHHHHHhhhhhhhhhccCCHHHHhhhhh---ccHHHHHHHHhc-CCCcccchhhhhhhhhhhhcChHHHHHHhhh
Q psy4702 20 LTCEEDTETACAAAGALAMLTSVSTPVCSMLLE---KNWVDIFKQILA-HPDVGVQHRALVIVGNILSAGKELAERVLST 95 (138)
Q Consensus 20 l~~eED~~tr~AA~GALAmLT~~~~~~c~~I~~---~~wleil~~L~~-~~~~~lqHRG~viv~Nmi~a~~e~a~kl~es 95 (138)
..+..|...|++|.-+|..+.+. |.++.. .+-+..|..++. +++..++.-++-++.-+...-+...+.. -.
T Consensus 23 ~l~s~~w~~R~~a~~~L~~l~~~----~~~~~~~~~~~i~~~L~~~l~kd~~~~V~~~a~~~l~~la~~l~~~~~~~-~~ 97 (242)
T 2qk2_A 23 KLEEKKWTLRKESLEVLEKLLTD----HPKLENGEYGALVSALKKVITKDSNVVLVAMAGKCLALLAKGLAKRFSNY-AS 97 (242)
T ss_dssp HHTCSSHHHHHHHHHHHHHHHHH----CSSBCCCCCHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHHHHHGGGGHHH-HH
T ss_pred hhccCCHHHHHHHHHHHHHHHcc----CCCCCCCCHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHhhhHHHH-HH
Confidence 34578999999999999888652 223322 566777788885 9999999999999988875322111111 12
Q ss_pred hHHHHHHHhhccccHHHHHHHHHHHHHHHh
Q psy4702 96 ELMEILMALTLLEGEEVRKLALQALAKGEE 125 (138)
Q Consensus 96 ~~leiL~~~~k~~~~~v~~~a~eaLk~~~~ 125 (138)
.++..|....+.++..|++.|.+||..+.+
T Consensus 98 ~ilp~ll~~l~d~~~~vr~~a~~aL~~~~~ 127 (242)
T 2qk2_A 98 ACVPSLLEKFKEKKPNVVTALREAIDAIYA 127 (242)
T ss_dssp HHHHHHHHGGGCCCHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHH
Confidence 244555555444433889999999998876
No 56
>2qk2_A LP04448P; mini spindles, MSPS, XMAP215, DIS1, STU2, heat repeat, micro plus END, +TIP, protein binding; 2.10A {Drosophila melanogaster}
Probab=90.18 E-value=1.3 Score=33.01 Aligned_cols=99 Identities=16% Similarity=0.145 Sum_probs=69.8
Q ss_pred hhhhcCCCCHHHHHhhhhhhhhhccCCHHHHhhhhh-ccHHHHHHHHhcCCCcccchhhhhhhhhhhhcC-hH-HHHHHh
Q psy4702 17 LFLLTCEEDTETACAAAGALAMLTSVSTPVCSMLLE-KNWVDIFKQILAHPDVGVQHRALVIVGNILSAG-KE-LAERVL 93 (138)
Q Consensus 17 Lvll~~eED~~tr~AA~GALAmLT~~~~~~c~~I~~-~~wleil~~L~~~~~~~lqHRG~viv~Nmi~a~-~e-~a~kl~ 93 (138)
++-..++.+..+|.+|..||..+... . . +..++.|...+.|+++.+|--.+-.+..++.+. .+ ......
T Consensus 103 ll~~l~d~~~~vr~~a~~aL~~~~~~-~-------~~~~ll~~l~~~l~~~~~~vr~~~l~~l~~~l~~~~~~~~~~~~l 174 (242)
T 2qk2_A 103 LLEKFKEKKPNVVTALREAIDAIYAS-T-------SLEAQQESIVESLSNKNPSVKSETALFIARALTRTQPTALNKKLL 174 (242)
T ss_dssp HHHGGGCCCHHHHHHHHHHHHHHHTT-S-------CHHHHHHHHHHHTTCSCHHHHHHHHHHHHHHHTTCCGGGCCHHHH
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHc-C-------CHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHcCCCCccHHHH
Confidence 33344556788999999999877552 1 2 457778888889999999888888888876542 22 222322
Q ss_pred hhhHHHHHHHhhccccHHHHHHHHHHHHHHH
Q psy4702 94 STELMEILMALTLLEGEEVRKLALQALAKGE 124 (138)
Q Consensus 94 es~~leiL~~~~k~~~~~v~~~a~eaLk~~~ 124 (138)
..++..|..+...+..+|++.|.+|+..+.
T Consensus 175 -~~l~p~l~~~l~D~~~~VR~~A~~~l~~l~ 204 (242)
T 2qk2_A 175 -KLLTTSLVKTLNEPDPTVRDSSAEALGTLI 204 (242)
T ss_dssp -HHHHHHHHHHHTSSCHHHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHhcCCChHHHHHHHHHHHHHH
Confidence 257778887775554489999999987765
No 57
>3ebb_A Phospholipase A2-activating protein; armadillo repeat, structural genomics consortium, SGC, WD repeat, acetylation, ATP-binding; 1.90A {Homo sapiens}
Probab=89.68 E-value=0.82 Score=37.46 Aligned_cols=96 Identities=15% Similarity=0.134 Sum_probs=60.7
Q ss_pred CCCHHHHHhhhhhhhhhccCCHHHHh-hhhh--ccHHHHHHHHhc-CCCcccchhhhhhhhhhhhcChHHHHHHhhhhHH
Q psy4702 23 EEDTETACAAAGALAMLTSVSTPVCS-MLLE--KNWVDIFKQILA-HPDVGVQHRALVIVGNILSAGKELAERVLSTELM 98 (138)
Q Consensus 23 eED~~tr~AA~GALAmLT~~~~~~c~-~I~~--~~wleil~~L~~-~~~~~lqHRG~viv~Nmi~a~~e~a~kl~es~~l 98 (138)
..+.-+|.|++..+--++.. - .+ +-++ .+-+..+..+.. ..|+|..||.+|.+.|++..++++.+-...-|+-
T Consensus 202 ~~nknl~iA~ATl~~NlAv~-~--~~~~~~~~~~~ll~~l~~il~~~~d~EalyR~LvALGtL~~~~~~~~~lak~l~~~ 278 (304)
T 3ebb_A 202 GSNKNIHIALATLALNYSVC-F--HKDHNIEGKAQCLSLISTILEVVQDLEATFRLLVALGTLISDDSNAVQLAKSLGVD 278 (304)
T ss_dssp SCCHHHHHHHHHHHHHHHHH-H--HHSCCHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHH
T ss_pred CCChhHHHHHHHHHHHHHHH-H--hhcCCchHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHhCChhHHHHHHHcCHH
Confidence 35667777777766555431 0 00 0011 333444444443 4688999999999999999888766555455666
Q ss_pred HHHHHhhccccH-HHHHHHHHHHH
Q psy4702 99 EILMALTLLEGE-EVRKLALQALA 121 (138)
Q Consensus 99 eiL~~~~k~~~~-~v~~~a~eaLk 121 (138)
.++..+.+.+.+ +|.++++.-|+
T Consensus 279 ~~v~~~~~~~~~~kv~~~~~~~~~ 302 (304)
T 3ebb_A 279 SQIKKYSSVSEPAKVSECCRFILN 302 (304)
T ss_dssp HHGGGGGGCCSSHHHHHHHHHHHT
T ss_pred HHHHHHHhCCCchhHHHHHHHHHH
Confidence 666666555445 89999887654
No 58
>2vgl_B AP-2 complex subunit beta-1; cytoplasmic vesicle, alternative splicing, endocytosis, lipid-binding, golgi apparatus, adaptor, membrane, transport; HET: IHP; 2.59A {Homo sapiens} SCOP: i.23.1.1 PDB: 2jkt_B 2jkr_B* 2xa7_B 1w63_B
Probab=89.20 E-value=1.4 Score=37.89 Aligned_cols=94 Identities=17% Similarity=0.188 Sum_probs=68.6
Q ss_pred CCCCHHHHHhhhhhhhhhccCCHHHHhhhhhccHHHHHHHHhcCCCcccchhhhhhhhhhhhcChHHHHHHhhhhHHHHH
Q psy4702 22 CEEDTETACAAAGALAMLTSVSTPVCSMLLEKNWVDIFKQILAHPDVGVQHRALVIVGNILSAGKELAERVLSTELMEIL 101 (138)
Q Consensus 22 ~eED~~tr~AA~GALAmLT~~~~~~c~~I~~~~wleil~~L~~~~~~~lqHRG~viv~Nmi~a~~e~a~kl~es~~leiL 101 (138)
...|+..|..|--+|+.+.. +.++..+ ++.+..++.|+++.+|..++.++.++...+.+... +.+.++.|
T Consensus 96 ~~~n~~ir~~AL~~L~~i~~--~~~~~~l-----~~~l~~~L~d~~~~VRk~A~~al~~i~~~~p~~~~---~~~~~~~l 165 (591)
T 2vgl_B 96 EDPNPLIRALAVRTMGCIRV--DKITEYL-----CEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQMVE---DQGFLDSL 165 (591)
T ss_dssp SSSSHHHHHHHHHHHHTCCS--GGGHHHH-----HHHHHHHSSCSCHHHHHHHHHHHHHHHHSSCCCHH---HHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHcCCh--HHHHHHH-----HHHHHHHcCCCChHHHHHHHHHHHHHHhhChhhcc---cccHHHHH
Confidence 34677788877777777653 4444443 34567788899999999999999999886655433 35778888
Q ss_pred HHhhccccHHHHHHHHHHHHHHHh
Q psy4702 102 MALTLLEGEEVRKLALQALAKGEE 125 (138)
Q Consensus 102 ~~~~k~~~~~v~~~a~eaLk~~~~ 125 (138)
..+...++..|+..|..+|..+..
T Consensus 166 ~~lL~d~d~~V~~~A~~aL~~i~~ 189 (591)
T 2vgl_B 166 RDLIADSNPMVVANAVAALSEISE 189 (591)
T ss_dssp HHTTSCSCHHHHHHHHHHHHHHTT
T ss_pred HHHhCCCChhHHHHHHHHHHHHHh
Confidence 888764433888888888877654
No 59
>1ibr_B P95, importin beta-1 subunit, nuclear factor; small GTPase, nuclear transport receptor, cell cycle, translation; HET: GNP; 2.30A {Homo sapiens} SCOP: a.118.1.1 PDB: 1m5n_S 1gcj_A 1f59_A 1o6o_A 1o6p_A
Probab=89.18 E-value=0.3 Score=38.62 Aligned_cols=96 Identities=21% Similarity=0.240 Sum_probs=68.6
Q ss_pred CHHHHHhhhhhhhhhccCCHHHHhhhhhccHHHHHHHHhcCCCcccchhhhhhhhhhhhcCh-H-HHHHHhhhhHHHHHH
Q psy4702 25 DTETACAAAGALAMLTSVSTPVCSMLLEKNWVDIFKQILAHPDVGVQHRALVIVGNILSAGK-E-LAERVLSTELMEILM 102 (138)
Q Consensus 25 D~~tr~AA~GALAmLT~~~~~~c~~I~~~~wleil~~L~~~~~~~lqHRG~viv~Nmi~a~~-e-~a~kl~es~~leiL~ 102 (138)
|...|++|+.+|..|+...+ ..++ +..++.+...+.+++..+++-++.++.++..... + +.. .+ ..++..|.
T Consensus 341 ~~~~r~~a~~~L~~l~~~~~---~~~~-~~~~~~l~~~l~~~~~~~r~aal~~l~~l~~~~~~~~~~~-~l-~~~~~~l~ 414 (462)
T 1ibr_B 341 DWNPCKAAGVCLMLLATCCE---DDIV-PHVLPFIKEHIKNPDWRYRDAAVMAFGCILEGPEPSQLKP-LV-IQAMPTLI 414 (462)
T ss_dssp CCSHHHHHHHHHHHHHHHTT---TTHH-HHHHHHHHHHTTCSSHHHHHHHHHHHHHTSSSSCTTTTCT-TT-TTHHHHHH
T ss_pred cchHHHHHHHHHHHHHHhcc---HHHH-HHHHHHHHHHhcCCChHHHHHHHHHHHHHhcCCcHHHHHH-HH-HHHHHHHH
Confidence 34689999999998876332 1222 4577788888889999999999999999986432 1 111 11 45777777
Q ss_pred HhhccccHHHHHHHHHHHHHHHhC
Q psy4702 103 ALTLLEGEEVRKLALQALAKGEEY 126 (138)
Q Consensus 103 ~~~k~~~~~v~~~a~eaLk~~~~~ 126 (138)
.+.+.+...|+..|..||..+.++
T Consensus 415 ~~l~d~~~~Vr~~a~~~l~~~~~~ 438 (462)
T 1ibr_B 415 ELMKDPSVVVRDTAAWTVGRICEL 438 (462)
T ss_dssp HGGGCSCHHHHHHHHHHHHHHHHH
T ss_pred HHhcCCCHHHHHHHHHHHHHHHHh
Confidence 776654448999999999888764
No 60
>1qgr_A Protein (importin beta subunit); transport receptor, nuclear import, heat motif, NLS-binding; 2.30A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qgk_A 2p8q_A 2q5d_A 3lww_A 1ukl_A 2qna_A
Probab=86.78 E-value=1.9 Score=37.10 Aligned_cols=98 Identities=19% Similarity=0.225 Sum_probs=67.3
Q ss_pred CCHHHHHhhhhhhhhhccCCHHHHhhhhhccHHHHHHHHhcCCCcccchhhhhhhhhhhhcCh-HHHHHHhhhhHHHHHH
Q psy4702 24 EDTETACAAAGALAMLTSVSTPVCSMLLEKNWVDIFKQILAHPDVGVQHRALVIVGNILSAGK-ELAERVLSTELMEILM 102 (138)
Q Consensus 24 ED~~tr~AA~GALAmLT~~~~~~c~~I~~~~wleil~~L~~~~~~~lqHRG~viv~Nmi~a~~-e~a~kl~es~~leiL~ 102 (138)
+|...|+||.-+|..|....+ ..++ +..++.+...+.+++..+|+.++.++.++..... +.-.... ..++..|.
T Consensus 340 ~~~~~r~~a~~~l~~l~~~~~---~~~~-~~~l~~l~~~l~~~~~~~r~~a~~~l~~i~~~~~~~~~~~~~-~~~l~~l~ 414 (876)
T 1qgr_A 340 DDWNPCKAAGVCLMLLATCCE---DDIV-PHVLPFIKEHIKNPDWRYRDAAVMAFGCILEGPEPSQLKPLV-IQAMPTLI 414 (876)
T ss_dssp TCCCHHHHHHHHHHHHHHHHG---GGGH-HHHHHHHHHHTTCSSHHHHHHHHHHHHHTSSSSCHHHHHHHH-HHHHHHHH
T ss_pred cccHHHHHHHHHHHHHHHHCc---HhhH-HHHHHHHHHHccCCChHHHHHHHHHHHHHHcCCCHHHHHHHH-HHHHHHHH
Confidence 455789999988888865211 2222 4567777888889999999999999999987543 3222222 34666666
Q ss_pred HhhccccHHHHHHHHHHHHHHHhC
Q psy4702 103 ALTLLEGEEVRKLALQALAKGEEY 126 (138)
Q Consensus 103 ~~~k~~~~~v~~~a~eaLk~~~~~ 126 (138)
...+.+...|+..|..+|..+.++
T Consensus 415 ~~l~d~~~~vr~~a~~~l~~~~~~ 438 (876)
T 1qgr_A 415 ELMKDPSVVVRDTAAWTVGRICEL 438 (876)
T ss_dssp HHHTCSSHHHHHHHHHHHHHHHHH
T ss_pred HHhCCCCHHHHHHHHHHHHHHHHh
Confidence 665544338888899998887764
No 61
>1ibr_B P95, importin beta-1 subunit, nuclear factor; small GTPase, nuclear transport receptor, cell cycle, translation; HET: GNP; 2.30A {Homo sapiens} SCOP: a.118.1.1 PDB: 1m5n_S 1gcj_A 1f59_A 1o6o_A 1o6p_A
Probab=85.53 E-value=3 Score=32.75 Aligned_cols=108 Identities=17% Similarity=0.087 Sum_probs=63.4
Q ss_pred hhhcCCC-CHHHHHhhhhhhhhhccCCHHHHh-hhhhccHHHHHHHHhcCCCcccchhhhhhhhhhhhcChHHHHHHhhh
Q psy4702 18 FLLTCEE-DTETACAAAGALAMLTSVSTPVCS-MLLEKNWVDIFKQILAHPDVGVQHRALVIVGNILSAGKELAERVLST 95 (138)
Q Consensus 18 vll~~eE-D~~tr~AA~GALAmLT~~~~~~c~-~I~~~~wleil~~L~~~~~~~lqHRG~viv~Nmi~a~~e~a~kl~es 95 (138)
-.|.+.+ +...|.+|.-++..+....+.... ..+.+--++++..+..+++++++.-.+-++.+++....+.-...+..
T Consensus 179 ~~l~~~~~~~~vr~~a~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~vr~~~~~~l~~l~~~~~~~~~~~~~~ 258 (462)
T 1ibr_B 179 QGMRKEEPSNNVKLAATNALLNSLEFTKANFDKESERHFIMQVVCEATQCPDTRVRVAALQNLVKIMSLYYQYMETYMGP 258 (462)
T ss_dssp HHHSTTCCCHHHHHHHHHHHHHHTTTTHHHHTSHHHHHHHHHHHHHHTTCSSHHHHHHHHHHHHHHHHHCGGGCTTTTTT
T ss_pred HHhCCCCCCHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444554 789999999988876542221110 00001126666777788888888777777777776543322222333
Q ss_pred hHHHHHHHhhccccHHHHHHHHHHHHHHHh
Q psy4702 96 ELMEILMALTLLEGEEVRKLALQALAKGEE 125 (138)
Q Consensus 96 ~~leiL~~~~k~~~~~v~~~a~eaLk~~~~ 125 (138)
++++.+..+.+.....++..|.+.+..+.+
T Consensus 259 ~l~~~~~~~~~~~~~~v~~~a~~~l~~~~~ 288 (462)
T 1ibr_B 259 ALFAITIEAMKSDIDEVALQGIEFWSNVCD 288 (462)
T ss_dssp THHHHHHHHHHCSSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCchHHHHHHHHHHHHHHH
Confidence 677777666554433666667666655544
No 62
>2bpt_A Importin beta-1 subunit; nuclear transport, nucleocytoplasmic transport, nuclear trafficking, importin- beta, complex; 1.99A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 2bku_B 3ea5_B* 3nd2_A
Probab=85.39 E-value=3.6 Score=35.35 Aligned_cols=106 Identities=15% Similarity=0.069 Sum_probs=61.1
Q ss_pred hcCCC-CHHHHHhhhhhhhhhccCCHHHHh-hhhhccHHHHHHHHhcCCCcccchhhhhhhhhhhhcChHHHHHHhhhhH
Q psy4702 20 LTCEE-DTETACAAAGALAMLTSVSTPVCS-MLLEKNWVDIFKQILAHPDVGVQHRALVIVGNILSAGKELAERVLSTEL 97 (138)
Q Consensus 20 l~~eE-D~~tr~AA~GALAmLT~~~~~~c~-~I~~~~wleil~~L~~~~~~~lqHRG~viv~Nmi~a~~e~a~kl~es~~ 97 (138)
+.+.+ +...|.+|.-+|..+..+.+.--. ....+..++.|..++.++++++++-++-++..++....+.-...+...+
T Consensus 188 l~~~~~~~~vr~~al~~l~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~~~~r~~a~~~l~~l~~~~~~~~~~~l~~~l 267 (861)
T 2bpt_A 188 AQSTETSKAVRLAALNALADSLIFIKNNMEREGERNYLMQVVCEATQAEDIEVQAAAFGCLCKIMSKYYTFMKPYMEQAL 267 (861)
T ss_dssp HSTTCCCHHHHHHHHHHHHHHGGGCHHHHTSHHHHHHHHHHHHHHHTCSCHHHHHHHHHHHHHHHHHHGGGCHHHHHHTH
T ss_pred hcCCCCCHHHHHHHHHHHHHHHHHHHHHccChhHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34443 788999999988766542221110 0000224555666777899999988888888887643322222222356
Q ss_pred HHHHHHhhccccHHHHHHHHHHHHHHHh
Q psy4702 98 MEILMALTLLEGEEVRKLALQALAKGEE 125 (138)
Q Consensus 98 leiL~~~~k~~~~~v~~~a~eaLk~~~~ 125 (138)
++.+....+..+..+...|.+.+..+.+
T Consensus 268 ~~~~~~~~~~~~~~vr~~a~~~l~~l~~ 295 (861)
T 2bpt_A 268 YALTIATMKSPNDKVASMTVEFWSTICE 295 (861)
T ss_dssp HHHHHHHTTCSSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCcHHHHHHHHHHHHHHHH
Confidence 6666655544333666666666655543
No 63
>2vgl_B AP-2 complex subunit beta-1; cytoplasmic vesicle, alternative splicing, endocytosis, lipid-binding, golgi apparatus, adaptor, membrane, transport; HET: IHP; 2.59A {Homo sapiens} SCOP: i.23.1.1 PDB: 2jkt_B 2jkr_B* 2xa7_B 1w63_B
Probab=85.18 E-value=1.1 Score=38.42 Aligned_cols=64 Identities=17% Similarity=0.247 Sum_probs=49.1
Q ss_pred hhcCCCCHHHHHhhhhhhhhhccCCHHHHhhhhhccHHHHHHHHhcCCCcccchhhhhhhhhhhhcC
Q psy4702 19 LLTCEEDTETACAAAGALAMLTSVSTPVCSMLLEKNWVDIFKQILAHPDVGVQHRALVIVGNILSAG 85 (138)
Q Consensus 19 ll~~eED~~tr~AA~GALAmLT~~~~~~c~~I~~~~wleil~~L~~~~~~~lqHRG~viv~Nmi~a~ 85 (138)
-+....|+..|++|+-|+.-+-..+|..+. +..|++.|..++.|+++.++.-++..+.++...+
T Consensus 128 ~~L~d~~~~VRk~A~~al~~i~~~~p~~~~---~~~~~~~l~~lL~d~d~~V~~~A~~aL~~i~~~~ 191 (591)
T 2vgl_B 128 KCLKDEDPYVRKTAAVCVAKLHDINAQMVE---DQGFLDSLRDLIADSNPMVVANAVAALSEISESH 191 (591)
T ss_dssp HHSSCSCHHHHHHHHHHHHHHHHSSCCCHH---HHHHHHHHHHTTSCSCHHHHHHHHHHHHHHTTSC
T ss_pred HHcCCCChHHHHHHHHHHHHHHhhChhhcc---cccHHHHHHHHhCCCChhHHHHHHHHHHHHHhhC
Confidence 344567899999999999877554444221 1579999999999999999888888888876654
No 64
>3grl_A General vesicular transport factor P115; vesicle transport, membrane trafficking, membrane tethering, fusion, snare, RAB GTPase, armadillo repeats; 2.00A {Bos taurus} PDB: 3gq2_A 2w3c_A
Probab=84.88 E-value=0.64 Score=42.47 Aligned_cols=88 Identities=13% Similarity=0.093 Sum_probs=68.7
Q ss_pred hhhcCCCCHHHHHhhhhhhhhhccCCHHHHhhhhh-ccHHHHHHHHhcCCCc----ccchhhhhhhhhhhhcChHHHHHH
Q psy4702 18 FLLTCEEDTETACAAAGALAMLTSVSTPVCSMLLE-KNWVDIFKQILAHPDV----GVQHRALVIVGNILSAGKELAERV 92 (138)
Q Consensus 18 vll~~eED~~tr~AA~GALAmLT~~~~~~c~~I~~-~~wleil~~L~~~~~~----~lqHRG~viv~Nmi~a~~e~a~kl 92 (138)
+.+-++.-+..|-.|.+.|.-||. +..-++||+. ++.+|.|..+...+.. .++.+-++++.|++..+...=.-|
T Consensus 172 v~lL~d~rE~iRneallLL~~Lt~-~n~~iQklVAFEnaFe~Lf~Ii~~Eg~~~Ggivv~DCL~ll~nLLr~N~sNQ~~F 250 (651)
T 3grl_A 172 MDLLADSREVIRNDGVLLLQALTR-SNGAIQKIVAFENAFERLLDIITEEGNSDGGIVVEDCLILLQNLLKNNNSNQNFF 250 (651)
T ss_dssp HGGGGCSSHHHHHHHHHHHHHHHT-TCHHHHHHHHHTTHHHHHHHHHHHHTGGGSHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHhCchHHHHHHHHHHHHHHhc-CCHHHHHHHHHhccHHHHHHHHHhcCCCccchhHHHHHHHHHHHHhcCHHHHHHH
Confidence 334455568899999999999999 7889999999 9999999999998776 455556666999998775555567
Q ss_pred hhhhHHHHHHHhhc
Q psy4702 93 LSTELMEILMALTL 106 (138)
Q Consensus 93 ~es~~leiL~~~~k 106 (138)
.|++.+.-|..+.+
T Consensus 251 rEt~~i~~L~~LL~ 264 (651)
T 3grl_A 251 KEGSYIQRMKPWFE 264 (651)
T ss_dssp HHTTCGGGGGGGGC
T ss_pred HHcCCHHHHHHHhC
Confidence 77777766665554
No 65
>1qgr_A Protein (importin beta subunit); transport receptor, nuclear import, heat motif, NLS-binding; 2.30A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qgk_A 2p8q_A 2q5d_A 3lww_A 1ukl_A 2qna_A
Probab=83.89 E-value=5.5 Score=34.25 Aligned_cols=106 Identities=17% Similarity=0.088 Sum_probs=65.2
Q ss_pred hhcCCC-CHHHHHhhhhhhhhhccCCHHHHh-hhhhccHHHHHHHHhcCCCcccchhhhhhhhhhhhcChHHHHHHhhhh
Q psy4702 19 LLTCEE-DTETACAAAGALAMLTSVSTPVCS-MLLEKNWVDIFKQILAHPDVGVQHRALVIVGNILSAGKELAERVLSTE 96 (138)
Q Consensus 19 ll~~eE-D~~tr~AA~GALAmLT~~~~~~c~-~I~~~~wleil~~L~~~~~~~lqHRG~viv~Nmi~a~~e~a~kl~es~ 96 (138)
.+.+.+ +...|.+|..+|.-+.+..+.-.. ....+..++.+..++.+++++++.-.+-++.+++....+.-...+...
T Consensus 180 ~l~~~~~~~~vr~~a~~~l~~~~~~~~~~~~~~~~~~~il~~l~~~~~~~~~~vr~~a~~~l~~l~~~~~~~~~~~~~~~ 259 (876)
T 1qgr_A 180 GMRKEEPSNNVKLAATNALLNSLEFTKANFDKESERHFIMQVVCEATQCPDTRVRVAALQNLVKIMSLYYQYMETYMGPA 259 (876)
T ss_dssp HHSTTCSCHHHHHHHHHHHHHHGGGCHHHHTSHHHHHHHHHHHHHHTTCSSHHHHHHHHHHHHHHHHHSGGGCHHHHTTT
T ss_pred hhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 344443 688999998888876542221111 000022466677777888888988888888888876544433444557
Q ss_pred HHHHHHHhhccccHHHHHHHHHHHHHHH
Q psy4702 97 LMEILMALTLLEGEEVRKLALQALAKGE 124 (138)
Q Consensus 97 ~leiL~~~~k~~~~~v~~~a~eaLk~~~ 124 (138)
+++.+....+.....++..|.+.+..+.
T Consensus 260 l~~~~~~~~~~~~~~v~~~al~~l~~l~ 287 (876)
T 1qgr_A 260 LFAITIEAMKSDIDEVALQGIEFWSNVC 287 (876)
T ss_dssp HHHHHHHHHTCSSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCchHHHHHHHHHHHHHH
Confidence 7888777665443366666666655544
No 66
>4ady_A RPN2, 26S proteasome regulatory subunit RPN2; protein binding, PC repeat; 2.70A {Saccharomyces cerevisiae} PDB: 4b4t_N
Probab=83.65 E-value=0.92 Score=43.10 Aligned_cols=98 Identities=17% Similarity=0.147 Sum_probs=59.1
Q ss_pred Chhh-hhhhhcCCCCHHHHHhhhhhhhhhccCCHHHHhhhhhccHHHHHHHHhcCCCcccchhhhhhhhhhhhcChHHHH
Q psy4702 12 SQVR-FLFLLTCEEDTETACAAAGALAMLTSVSTPVCSMLLEKNWVDIFKQILAHPDVGVQHRALVIVGNILSAGKELAE 90 (138)
Q Consensus 12 ~Rlk-lLvll~~eED~~tr~AA~GALAmLT~~~~~~c~~I~~~~wleil~~L~~~~~~~lqHRG~viv~Nmi~a~~e~a~ 90 (138)
..++ +|-.+....+...|++|.-||+++.--++..|.++++ .|..+.|+.+|+.....+..+-.+.+.
T Consensus 577 ~aIq~LL~~~~~d~~d~VRraAViaLGlI~~g~~e~v~rlv~--------~L~~~~d~~VR~gAalALGli~aGn~~--- 645 (963)
T 4ady_A 577 SAVKRLLHVAVSDSNDDVRRAAVIALGFVLLRDYTTVPRIVQ--------LLSKSHNAHVRCGTAFALGIACAGKGL--- 645 (963)
T ss_dssp HHHHHHHHHHHHCSCHHHHHHHHHHHHHHTSSSCSSHHHHTT--------TGGGCSCHHHHHHHHHHHHHHTSSSCC---
T ss_pred HHHHHHHHHhccCCcHHHHHHHHHHHHhhccCCHHHHHHHHH--------HHHhcCCHHHHHHHHHHHHHhccCCCc---
Confidence 3344 4444444456678999999999865434555555544 344577777765555544444333221
Q ss_pred HHhhhhHHHHHHHhhccccHHHHHHHHHHHHHHH
Q psy4702 91 RVLSTELMEILMALTLLEGEEVRKLALQALAKGE 124 (138)
Q Consensus 91 kl~es~~leiL~~~~k~~~~~v~~~a~eaLk~~~ 124 (138)
..++++|..+++.++..|.+.|..+|-...
T Consensus 646 ----~~aid~L~~L~~D~d~~Vrq~Ai~ALG~Ig 675 (963)
T 4ady_A 646 ----QSAIDVLDPLTKDPVDFVRQAAMIALSMIL 675 (963)
T ss_dssp ----HHHHHHHHHHHTCSSHHHHHHHHHHHHHHS
T ss_pred ----HHHHHHHHHHccCCCHHHHHHHHHHHHHHh
Confidence 234667777777665688888888876543
No 67
>2bpt_A Importin beta-1 subunit; nuclear transport, nucleocytoplasmic transport, nuclear trafficking, importin- beta, complex; 1.99A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 2bku_B 3ea5_B* 3nd2_A
Probab=81.52 E-value=5.7 Score=34.06 Aligned_cols=96 Identities=10% Similarity=0.171 Sum_probs=64.0
Q ss_pred CHHHHHhhhhhhhhhccCCHHHHhhhhhccHHHHHHHHhcCCCcccchhhhhhhhhhhhcCh-HHHHHHhhhhHHHHHHH
Q psy4702 25 DTETACAAAGALAMLTSVSTPVCSMLLEKNWVDIFKQILAHPDVGVQHRALVIVGNILSAGK-ELAERVLSTELMEILMA 103 (138)
Q Consensus 25 D~~tr~AA~GALAmLT~~~~~~c~~I~~~~wleil~~L~~~~~~~lqHRG~viv~Nmi~a~~-e~a~kl~es~~leiL~~ 103 (138)
+...|.+|.-+|..|+...+ ..++ +..++.+..++.+++...|+-++.++.++..... +.-...++ .++..|..
T Consensus 344 ~~~~r~~a~~~L~~l~~~~~---~~~~-~~l~~~l~~~l~~~~~~~r~~a~~~l~~i~~~~~~~~~~~~l~-~il~~l~~ 418 (861)
T 2bpt_A 344 DWNVSMSAGACLQLFAQNCG---NHIL-EPVLEFVEQNITADNWRNREAAVMAFGSIMDGPDKVQRTYYVH-QALPSILN 418 (861)
T ss_dssp CCHHHHHHHHHHHHHHHHHG---GGGH-HHHHHHHHHHTTCSSHHHHHHHHHHHHHTSSSSCHHHHHHHHH-HHHHHHHH
T ss_pred cCcHHHHHHHHHHHHHHHcc---HhHH-HHHHHHHHHHcCCCChhHHHHHHHHHHHHHcCCCHHHHHHHHH-HHHHHHHH
Confidence 34688888888887765211 1111 5577888888889999999999999999987532 32233333 46666666
Q ss_pred hhccccHHHHHHHHHHHHHHHh
Q psy4702 104 LTLLEGEEVRKLALQALAKGEE 125 (138)
Q Consensus 104 ~~k~~~~~v~~~a~eaLk~~~~ 125 (138)
..+.+...|+..+..+|..+.+
T Consensus 419 ~l~d~~~~vr~~a~~~l~~l~~ 440 (861)
T 2bpt_A 419 LMNDQSLQVKETTAWCIGRIAD 440 (861)
T ss_dssp GGGCSCHHHHHHHHHHHHHHHH
T ss_pred HcCCCcHHHHHHHHHHHHHHHH
Confidence 6554433777777777776654
No 68
>4gmo_A Putative uncharacterized protein; ARM, heat, solenoid, nuclear transport, chaperone, RPL5, RPL KAP104, nucleus; 2.10A {Chaetomium thermophilum var} PDB: 4gmn_A
Probab=79.24 E-value=4.3 Score=35.79 Aligned_cols=70 Identities=19% Similarity=0.299 Sum_probs=53.2
Q ss_pred ccHHHHHHHHhcCCCcccchhhhhhhhhhhhcChHHHHHHhhhhHHHHHHHhhccccH-HHHHHHHHHHHHHH
Q psy4702 53 KNWVDIFKQILAHPDVGVQHRALVIVGNILSAGKELAERVLSTELMEILMALTLLEGE-EVRKLALQALAKGE 124 (138)
Q Consensus 53 ~~wleil~~L~~~~~~~lqHRG~viv~Nmi~a~~e~a~kl~es~~leiL~~~~k~~~~-~v~~~a~eaLk~~~ 124 (138)
++-+.+|+. +.+++++.|.-++..+.|++. +.+.-+.+...+++..+..-+..+.+ +|+..|..||.-+-
T Consensus 34 ~~i~Pll~~-L~S~~~~~r~~A~~al~~l~~-~~~~~~l~~~~~~v~~ll~~lL~D~~~~Vr~~A~gaLrnL~ 104 (684)
T 4gmo_A 34 DKILPVLKD-LKSPDAKSRTTAAGAIANIVQ-DAKCRKLLLREQVVHIVLTETLTDNNIDSRAAGWEILKVLA 104 (684)
T ss_dssp HTTHHHHHH-HSSSCCSHHHHHHHHHHHHTT-SHHHHHHHHHTTHHHHHHHTTTTCSCHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHH-cCCCCHHHHHHHHHHHHHHHc-CcHHHHHHHHcCCHHHHHHHHcCCCCHHHHHHHHHHHHHHH
Confidence 455677765 689999999999999999996 66666777788888766554334334 99999999987664
No 69
>2qk1_A Protein STU2; STU2P, XMAP215, DIS1, TOG, CH-TOG, heat repeat, microtubule plus END, +TIP, protein binding; 1.70A {Saccharomyces cerevisiae}
Probab=74.85 E-value=11 Score=28.91 Aligned_cols=97 Identities=12% Similarity=0.142 Sum_probs=62.9
Q ss_pred HHHHHhhhhhhhhhcc-CCHHHHhhhhh-ccHHHHHHHHhcCCCcccchhhhhhhhhhhhcChH---HHHHHhhhhHHHH
Q psy4702 26 TETACAAAGALAMLTS-VSTPVCSMLLE-KNWVDIFKQILAHPDVGVQHRALVIVGNILSAGKE---LAERVLSTELMEI 100 (138)
Q Consensus 26 ~~tr~AA~GALAmLT~-~~~~~c~~I~~-~~wleil~~L~~~~~~~lqHRG~viv~Nmi~a~~e---~a~kl~es~~lei 100 (138)
...+.||..||-.+.. .+|..+. .. +..++.|...+.|+++.+|--.+-.+...+.+.+. .-.+.+...++..
T Consensus 118 ~~V~~aa~~al~~i~~~~~~~~~~--~~l~~ll~~l~~~l~~k~~~vk~~al~~l~~~~~~~~~~~~~l~~~l~~~iip~ 195 (249)
T 2qk1_A 118 PSVIEAIRKALLTICKYYDPLASS--GRNEDMLKDILEHMKHKTPQIRMECTQLFNASMKEEKDGYSTLQRYLKDEVVPI 195 (249)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTCTT--CTTHHHHHHHHHHTTCSSHHHHHHHHHHHHHHHHHCCSCSHHHHHHHTTTHHHH
T ss_pred HHHHHHHHHHHHHHHHHccccccC--CcHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHcCCcchhHHHHHHHHHHHH
Confidence 4566666665544332 1111100 11 35677777888999999988888788888765542 1223344678888
Q ss_pred HHHhhccccHHHHHHHHHHHHHHH
Q psy4702 101 LMALTLLEGEEVRKLALQALAKGE 124 (138)
Q Consensus 101 L~~~~k~~~~~v~~~a~eaLk~~~ 124 (138)
|+.+...++.+|++.|.+||-.+.
T Consensus 196 l~~~l~D~~~~VR~aA~~~l~~i~ 219 (249)
T 2qk1_A 196 VIQIVNDTQPAIRTIGFESFAILI 219 (249)
T ss_dssp HHHHHTCSSHHHHHHHHHHHHHHH
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHH
Confidence 888876665599999999988765
No 70
>3tjz_B Coatomer subunit gamma; protein trafficking, golgi membrane, protein transport-prote binding complex; HET: GNP; 2.90A {Bos taurus}
Probab=74.02 E-value=6.6 Score=32.79 Aligned_cols=67 Identities=16% Similarity=0.207 Sum_probs=51.1
Q ss_pred CCCCHHHHHhhhhhhhhhccCCHHHHhhhhhccHHHHHHHHhcCCCcccchhhhhhhhhhhhcChHHHHHHh
Q psy4702 22 CEEDTETACAAAGALAMLTSVSTPVCSMLLEKNWVDIFKQILAHPDVGVQHRALVIVGNILSAGKELAERVL 93 (138)
Q Consensus 22 ~eED~~tr~AA~GALAmLT~~~~~~c~~I~~~~wleil~~L~~~~~~~lqHRG~viv~Nmi~a~~e~a~kl~ 93 (138)
...++-.|++|.-+.+=|-...|.++ ++|++-++.+..+.|+.+|+.++..++.+-..++..-.|++
T Consensus 149 ~d~~pyVRk~A~l~~~kL~~~~pe~v-----~~~~~~l~~ll~d~n~~V~~~Al~lL~ei~~~d~~a~~kLv 215 (355)
T 3tjz_B 149 VDKVPSVSSSALVSSLHLLKCSFDVV-----KRWVNEAQEAASSDNIMVQYHALGLLYHVRKNDRLAVSKMI 215 (355)
T ss_dssp TCSSHHHHHHHHHHHHHHTTTCHHHH-----HTTHHHHHHHTTCSSHHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHhccCHHHH-----HHHHHHHHHHhcCCCccHHHHHHHHHHHHHhhchHHHHHHH
Confidence 34677788888877665544445544 47999999999999999999999999988877775445543
No 71
>1u6g_C TIP120 protein, CAND1; cullin repeat, heat repeat, ring finger, ligase; 3.10A {Homo sapiens} SCOP: a.118.1.2 PDB: 4a0c_A
Probab=69.17 E-value=8.4 Score=35.38 Aligned_cols=69 Identities=22% Similarity=0.283 Sum_probs=46.8
Q ss_pred HHHHHhcCCCcccchhhhhhhhhhhhcChHHHHHHhhhhHHHHHHHhhcc-----------------ccH-HHHHHHHHH
Q psy4702 58 IFKQILAHPDVGVQHRALVIVGNILSAGKELAERVLSTELMEILMALTLL-----------------EGE-EVRKLALQA 119 (138)
Q Consensus 58 il~~L~~~~~~~lqHRG~viv~Nmi~a~~e~a~kl~es~~leiL~~~~k~-----------------~~~-~v~~~a~ea 119 (138)
-|+..+.++++++|--++.++.-++...+++-.... ..++..|...++. +++ ++++.|.+|
T Consensus 1010 ~ll~~l~d~~~~vr~~a~~~l~~~~~~~~~~~~~~l-~~~lp~l~~~~~~~~~~~~~v~~gp~k~~vd~~l~~rk~a~~~ 1088 (1230)
T 1u6g_C 1010 DFLKTLEDPDLNVRRVALVTFNSAAHNKPSLIRDLL-DTVLPHLYNETKVRKELIREVEMGPFKHTVDDGLDIRKAAFEC 1088 (1230)
T ss_dssp TTHHHHSSSSTHHHHHHHHHHHHHHHHCGGGTGGGH-HHHHHHHHHTTSCCGGGEEEEEETTEEEEEETHHHHHHHHHHH
T ss_pred HHHHhcCCCcHHHHHHHHHHHHHHHhcChHhHHHHH-HHHHHHHHHHhcccHHhheeeccCCcccccCCcHHHHHHHHHH
Confidence 344456788888876666666556665555543344 3477777777632 334 899999999
Q ss_pred HHHHHhCC
Q psy4702 120 LAKGEEYG 127 (138)
Q Consensus 120 Lk~~~~~g 127 (138)
+-+++++.
T Consensus 1089 ~~~ll~~~ 1096 (1230)
T 1u6g_C 1089 MYTLLDSC 1096 (1230)
T ss_dssp HHHHHHSS
T ss_pred HHHHHHHH
Confidence 99999874
No 72
>1u6g_C TIP120 protein, CAND1; cullin repeat, heat repeat, ring finger, ligase; 3.10A {Homo sapiens} SCOP: a.118.1.2 PDB: 4a0c_A
Probab=68.61 E-value=20 Score=32.90 Aligned_cols=98 Identities=13% Similarity=0.095 Sum_probs=63.8
Q ss_pred CCCCHHHHHhhhhhhhhhccCCHHHHhhhhh-ccHHHHHHHHhcCCCcccchhhhhhhhhhhhcChHH------HHHHhh
Q psy4702 22 CEEDTETACAAAGALAMLTSVSTPVCSMLLE-KNWVDIFKQILAHPDVGVQHRALVIVGNILSAGKEL------AERVLS 94 (138)
Q Consensus 22 ~eED~~tr~AA~GALAmLT~~~~~~c~~I~~-~~wleil~~L~~~~~~~lqHRG~viv~Nmi~a~~e~------a~kl~e 94 (138)
...|...|.+|+-+|+.+....+. -. +.-++.|...+.++++.+|+-...++..++..-..- ... .-
T Consensus 58 ~d~~~~vR~~A~~~L~~l~~~~~~-----~~~~~i~~~Ll~~l~d~~~~vR~~a~~~L~~i~~~l~~~~~~~~~~~~-~~ 131 (1230)
T 1u6g_C 58 EDKNGEVQNLAVKCLGPLVSKVKE-----YQVETIVDTLCTNMLSDKEQLRDISSIGLKTVIGELPPASSGSALAAN-VC 131 (1230)
T ss_dssp TCSSHHHHHHHHHHHHHHHTTSCH-----HHHHHHHHHHHHHTTCSSSHHHHHHHHHHHHHHHHCC-----CCTHHH-HH
T ss_pred cCCCHHHHHHHHHHHHHHHHhCCH-----HHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHhCCCcccccchHHH-HH
Confidence 357889999999998877652111 11 445555666667899999888888888877543221 111 22
Q ss_pred hhHHHHHHHhhccccH-HHHHHHHHHHHHHHh
Q psy4702 95 TELMEILMALTLLEGE-EVRKLALQALAKGEE 125 (138)
Q Consensus 95 s~~leiL~~~~k~~~~-~v~~~a~eaLk~~~~ 125 (138)
.+++..|......+.+ .++..|.++|..+.+
T Consensus 132 ~~llp~L~~~l~~~~~~~~~~~al~~l~~~~~ 163 (1230)
T 1u6g_C 132 KKITGRLTSAIAKQEDVSVQLEALDIMADMLS 163 (1230)
T ss_dssp HHHHHHHHHHHSCCSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCchHHHHHHHHHHHHHHH
Confidence 4567777777664333 778888888877764
No 73
>3b2a_A TON_1937, putative uncharacterized protein; heat-repeats, hypothetical, unknown function; 2.20A {Thermococcus onnurineus}
Probab=64.13 E-value=16 Score=30.00 Aligned_cols=110 Identities=20% Similarity=0.223 Sum_probs=76.4
Q ss_pred ccCCChhhhhhhhcCCCCHHHHHhhhhhhhhhccCCHHHHhhhhhccHHHHHHHHhcCCCcccchhhhhhhhhhhhc---
Q psy4702 8 LFYCSQVRFLFLLTCEEDTETACAAAGALAMLTSVSTPVCSMLLEKNWVDIFKQILAHPDVGVQHRALVIVGNILSA--- 84 (138)
Q Consensus 8 ~~~n~RlklLvll~~eED~~tr~AA~GALAmLT~~~~~~c~~I~~~~wleil~~L~~~~~~~lqHRG~viv~Nmi~a--- 84 (138)
....+.+.++.=|-.++|..++..|--+|-=+...-|+.-+...=++.++-+.++..++|+.+--|++=|++=++..
T Consensus 29 ~~~e~~l~~L~~LL~dkD~~vk~raL~~LeellK~~~~~l~~~~~e~~Ld~iI~llk~~dEkval~A~r~L~~LLe~vpL 108 (265)
T 3b2a_A 29 LEDKRALFLILELAGEDDETTRLRAFVALGEILKRADSDLRMMVLERHLDVFINALSQENEKVTIKALRALGYLVKDVPM 108 (265)
T ss_dssp HHCHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTCCSTTHHHHHHHHHHHHHHHTTCCB
T ss_pred HhchhHHHHHHHHHhccchHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHcCCCC
Confidence 44556788888889999999998876666544441122222222278999999999999999999999999888865
Q ss_pred ChHHHHHHhhhhHHHHHHHhhccccH-HHHHHHHHHHHHH
Q psy4702 85 GKELAERVLSTELMEILMALTLLEGE-EVRKLALQALAKG 123 (138)
Q Consensus 85 ~~e~a~kl~es~~leiL~~~~k~~~~-~v~~~a~eaLk~~ 123 (138)
+++--.|+ .+.|+.+.| +++ -....|.+.|.++
T Consensus 109 ~~~~y~Kl-----~~aL~dlik-~~~~il~~eaae~Lgkl 142 (265)
T 3b2a_A 109 GSKTFLKA-----AKTLVSLLE-SPDDMMRIETIDVLSKL 142 (265)
T ss_dssp CHHHHHHH-----HHHHHHHTT-SCCHHHHHHHHHHHHHC
T ss_pred CHHHHHHH-----HHHHHHHhc-CCCchHHHHHHHHhCcC
Confidence 34444554 556777766 333 5566666666665
No 74
>2qk1_A Protein STU2; STU2P, XMAP215, DIS1, TOG, CH-TOG, heat repeat, microtubule plus END, +TIP, protein binding; 1.70A {Saccharomyces cerevisiae}
Probab=60.04 E-value=13 Score=28.57 Aligned_cols=100 Identities=15% Similarity=0.072 Sum_probs=63.8
Q ss_pred CCCCHHHHHhhhhhhhh-hccCCHHHHhhhh--h---ccHHHHHHHHh-cCCCcccchhhhhhhhhhhhcC--hHHHHHH
Q psy4702 22 CEEDTETACAAAGALAM-LTSVSTPVCSMLL--E---KNWVDIFKQIL-AHPDVGVQHRALVIVGNILSAG--KELAERV 92 (138)
Q Consensus 22 ~eED~~tr~AA~GALAm-LT~~~~~~c~~I~--~---~~wleil~~L~-~~~~~~lqHRG~viv~Nmi~a~--~e~a~kl 92 (138)
...|..-|++|.-+|+. +.+ + |.++. . ..-++.|.... .+.|..++..++-++..|...= ..+.+..
T Consensus 26 ~s~~w~eRk~al~~L~~~~~~---~-~~~i~~~~~~~~~~~~~L~~~l~~D~n~~v~~~A~~al~~la~~l~~~~f~~~y 101 (249)
T 2qk1_A 26 TSSKWKDRVEALEEFWDSVLS---Q-TKKLKSTSQNYSNLLGIYGHIIQKDANIQAVALAAQSVELICDKLKTPGFSKDY 101 (249)
T ss_dssp TCSSHHHHHHHHHHHHHHTGG---G-CCCBCCTTCCCHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHHHHHCTTTSCHHH
T ss_pred hcCCHHHHHHHHHHHHHHHHh---c-CCccccCcccHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHhcccccccHHH
Confidence 45788899999999988 754 1 45555 3 34555666666 6888889988988888887421 1111011
Q ss_pred hhhhHHHHHHHhhccccHHHHHHHHHHHHHHHhC
Q psy4702 93 LSTELMEILMALTLLEGEEVRKLALQALAKGEEY 126 (138)
Q Consensus 93 ~es~~leiL~~~~k~~~~~v~~~a~eaLk~~~~~ 126 (138)
-..++-.|....+..+..|++.+..||..+.+.
T Consensus 102 -~~~llp~ll~~l~dkk~~V~~aa~~al~~i~~~ 134 (249)
T 2qk1_A 102 -VSLVFTPLLDRTKEKKPSVIEAIRKALLTICKY 134 (249)
T ss_dssp -HHHHHHHHHHGGGCCCHHHHHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHH
Confidence 112344444444443338889999999988873
No 75
>4ady_A RPN2, 26S proteasome regulatory subunit RPN2; protein binding, PC repeat; 2.70A {Saccharomyces cerevisiae} PDB: 4b4t_N
Probab=58.65 E-value=16 Score=34.81 Aligned_cols=28 Identities=14% Similarity=0.108 Sum_probs=16.7
Q ss_pred CCCHHHHHhhhhhhhhhccCCHHHHhhh
Q psy4702 23 EEDTETACAAAGALAMLTSVSTPVCSML 50 (138)
Q Consensus 23 eED~~tr~AA~GALAmLT~~~~~~c~~I 50 (138)
.++++.||+|+.+|+.+.--.+..|..+
T Consensus 519 ~~~e~vrR~aalgLGll~~g~~e~~~~l 546 (963)
T 4ady_A 519 TQHGNITRGLAVGLALINYGRQELADDL 546 (963)
T ss_dssp CSCHHHHHHHHHHHHHHTTTCGGGGHHH
T ss_pred cCcHHHHHHHHHHHHhhhCCChHHHHHH
Confidence 3566777777777776543345444444
No 76
>1w63_A Adapter-related protein complex 1 gamma 1 subunit; endocytosis, clathrin adaptor, transport, coated PITS; 4.0A {Mus musculus} SCOP: i.23.1.1
Probab=55.93 E-value=60 Score=27.92 Aligned_cols=33 Identities=15% Similarity=0.228 Sum_probs=26.7
Q ss_pred HHHHHHHHhcCCCcccchhhhhhhhhhhhcChH
Q psy4702 55 WVDIFKQILAHPDVGVQHRALVIVGNILSAGKE 87 (138)
Q Consensus 55 wleil~~L~~~~~~~lqHRG~viv~Nmi~a~~e 87 (138)
-.+.|..++.++++++||=++-.+..+.....+
T Consensus 314 a~~~L~~~L~~~d~~vr~~aL~~L~~i~~~~p~ 346 (618)
T 1w63_A 314 AINILGRFLLNNDKNIRYVALTSLLKTVQTDHN 346 (618)
T ss_dssp HHHHHHHHHTCSSTTTHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCchHHHHHHHHHHHHhhCHH
Confidence 467888888999999999999888888765443
No 77
>2vgl_A Adaptor protein complex AP-2, alpha 2 subunit; cytoplasmic vesicle, alternative splicing, endocytosis, lipid-binding, golgi apparatus, adaptor, membrane, transport; HET: IHP; 2.59A {Rattus norvegicus} PDB: 2xa7_A 2jkr_A 2jkt_A
Probab=54.60 E-value=10 Score=33.13 Aligned_cols=62 Identities=19% Similarity=0.252 Sum_probs=45.5
Q ss_pred CCCCHHHHHhhhhhhhhhccCCHHHHhhhhh-ccHHHHHHHHhcCCCcccchhhhhhhhhhhhcChH
Q psy4702 22 CEEDTETACAAAGALAMLTSVSTPVCSMLLE-KNWVDIFKQILAHPDVGVQHRALVIVGNILSAGKE 87 (138)
Q Consensus 22 ~eED~~tr~AA~GALAmLT~~~~~~c~~I~~-~~wleil~~L~~~~~~~lqHRG~viv~Nmi~a~~e 87 (138)
...++-.|+.|+-|+.-+-..+|. ++. ++|++.+..++.|+|+.++.-++..+..+...+++
T Consensus 158 ~d~~~~VRK~A~~al~kl~~~~p~----~~~~~~~~~~l~~lL~d~d~~V~~~a~~~l~~i~~~~~~ 220 (621)
T 2vgl_A 158 GDTMDSVKQSAALCLLRLYRTSPD----LVPMGDWTSRVVHLLNDQHLGVVTAATSLITTLAQKNPE 220 (621)
T ss_dssp SSSCHHHHHHHHHHHHHHHHHCGG----GCCCCSCHHHHHHHTTCSCHHHHHHHHHHHHHHHHHCHH
T ss_pred CCCCHHHHHHHHHHHHHHHHhChh----hcCchhHHHHHHHHhCCCCccHHHHHHHHHHHHHHhChH
Confidence 567778888887777665543332 222 48999999999999999987777777777766654
No 78
>1w63_A Adapter-related protein complex 1 gamma 1 subunit; endocytosis, clathrin adaptor, transport, coated PITS; 4.0A {Mus musculus} SCOP: i.23.1.1
Probab=47.87 E-value=90 Score=26.78 Aligned_cols=43 Identities=14% Similarity=0.166 Sum_probs=26.1
Q ss_pred cCCCCHHHHHhhhhhhhhhccCCHHHHhhhhh--ccHHHHHHHHh
Q psy4702 21 TCEEDTETACAAAGALAMLTSVSTPVCSMLLE--KNWVDIFKQIL 63 (138)
Q Consensus 21 ~~eED~~tr~AA~GALAmLT~~~~~~c~~I~~--~~wleil~~L~ 63 (138)
-.+.|+..+.+|..+|.-+...++.....+.. +..+.+|..++
T Consensus 188 L~D~d~~V~~~Al~~L~~i~~~~~~~~~~~~~~v~~l~~~L~~~~ 232 (618)
T 1w63_A 188 LNEKNHGVLHTSVVLLTEMCERSPDMLAHFRKLVPQLVRILKNLI 232 (618)
T ss_dssp TTCCCHHHHHHHHHHHHHHCCSHHHHHHHHHTTHHHHHHHHHHHH
T ss_pred hCCCCHhHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHH
Confidence 34578889999999998887644443333322 44444444443
No 79
>2vgl_A Adaptor protein complex AP-2, alpha 2 subunit; cytoplasmic vesicle, alternative splicing, endocytosis, lipid-binding, golgi apparatus, adaptor, membrane, transport; HET: IHP; 2.59A {Rattus norvegicus} PDB: 2xa7_A 2jkr_A 2jkt_A
Probab=45.29 E-value=35 Score=29.67 Aligned_cols=89 Identities=12% Similarity=0.068 Sum_probs=57.7
Q ss_pred CCHHHHHhhhhhhhhhccCCHHHHhhhhhccHHHHHHHHh--cCCCcccchhhhhhhhhhhhcChHHHHHHhhhhHHHHH
Q psy4702 24 EDTETACAAAGALAMLTSVSTPVCSMLLEKNWVDIFKQIL--AHPDVGVQHRALVIVGNILSAGKELAERVLSTELMEIL 101 (138)
Q Consensus 24 ED~~tr~AA~GALAmLT~~~~~~c~~I~~~~wleil~~L~--~~~~~~lqHRG~viv~Nmi~a~~e~a~kl~es~~leiL 101 (138)
.++-.|..|--+|+.+.+ +..+..+. .-+..++ .|+++-+|-+++++++++..-+.++.. ..+.++.|
T Consensus 123 ~n~~ir~lALr~L~~i~~--~e~~~~l~-----~~v~~~l~~~d~~~~VRK~A~~al~kl~~~~p~~~~---~~~~~~~l 192 (621)
T 2vgl_A 123 RNPTFMGLALHCIANVGS--REMAEAFA-----GEIPKILVAGDTMDSVKQSAALCLLRLYRTSPDLVP---MGDWTSRV 192 (621)
T ss_dssp CCHHHHHHHHHHHHHHCC--HHHHHHHT-----THHHHHHHCSSSCHHHHHHHHHHHHHHHHHCGGGCC---CCSCHHHH
T ss_pred CCHHHHHHHHHHhhccCC--HHHHHHHH-----HHHHHHHhCCCCCHHHHHHHHHHHHHHHHhChhhcC---chhHHHHH
Confidence 455667788888888754 66666553 3344555 799999999999999999876654432 13566777
Q ss_pred HHhhccccHHHHHHHHHHHHH
Q psy4702 102 MALTLLEGEEVRKLALQALAK 122 (138)
Q Consensus 102 ~~~~k~~~~~v~~~a~eaLk~ 122 (138)
..+...++..|+..|..+|..
T Consensus 193 ~~lL~d~d~~V~~~a~~~l~~ 213 (621)
T 2vgl_A 193 VHLLNDQHLGVVTAATSLITT 213 (621)
T ss_dssp HHHTTCSCHHHHHHHHHHHHH
T ss_pred HHHhCCCCccHHHHHHHHHHH
Confidence 766643222444555444433
No 80
>1x5b_A Signal transducing adaptor molecule 2; VHS domain, ubiquitin binding, STAM2, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2l0t_B
Probab=45.05 E-value=85 Score=23.03 Aligned_cols=63 Identities=17% Similarity=0.231 Sum_probs=40.5
Q ss_pred HHHhhhhh-c----cHHHHHHHHhcCCCcccchhhhhhhhhhhhc-ChHHHHHHhhhhHHHHHHHhhcc
Q psy4702 45 PVCSMLLE-K----NWVDIFKQILAHPDVGVQHRALVIVGNILSA-GKELAERVLSTELMEILMALTLL 107 (138)
Q Consensus 45 ~~c~~I~~-~----~wleil~~L~~~~~~~lqHRG~viv~Nmi~a-~~e~a~kl~es~~leiL~~~~k~ 107 (138)
.+|..|-. + .-+..|..-+.+.|+.+|+|.+.++--++.. +......+-..+.++-|..+.+.
T Consensus 38 eicD~I~~~~~~~keA~ral~krl~~~n~~vql~AL~LLd~~vkNcG~~Fh~evas~~Fl~el~~l~~~ 106 (163)
T 1x5b_A 38 DICDKVGSTPNGAKDCLKAIMKRVNHKVPHVALQALTLLGACVANCGKIFHLEVCSRDFATEVRAVIKN 106 (163)
T ss_dssp HHHHHHHHSSSHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHTCHHHHHHHTSHHHHHHHHHHHHT
T ss_pred HHHHHHhCCCccHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhHHHHHHHhhHHHHHHHHHHHcc
Confidence 35666544 2 2333444446789999999999888887764 45455566666667666666553
No 81
>1lrv_A LRV, leucine-rich repeat variant; leucine-rich repeats, repetitive structure, iron sulfur proteins, nitrogen fixation; 2.60A {Azotobacter vinelandii} SCOP: a.118.1.5
Probab=41.57 E-value=16 Score=28.72 Aligned_cols=20 Identities=10% Similarity=-0.011 Sum_probs=11.0
Q ss_pred hhhhhcCCCCHHHHHhhhhh
Q psy4702 16 FLFLLTCEEDTETACAAAGA 35 (138)
Q Consensus 16 lLvll~~eED~~tr~AA~GA 35 (138)
++..|...+|...|.++++.
T Consensus 126 ~L~~L~~D~d~~VR~~aA~~ 145 (244)
T 1lrv_A 126 QLEQMAADRDYLVRAYVVQR 145 (244)
T ss_dssp GGGGGTTCSSHHHHHHHHHH
T ss_pred HHHHHHcCCCHHHHHHHHHh
Confidence 34445555666666665553
No 82
>3ldz_A STAM-1, signal transducing adapter molecule 1; ubiquitin-binding, cytoplasm, UBL conjugation, endosome, membrane, protein transport, SH3 domain; 2.60A {Homo sapiens} SCOP: a.118.9.0
Probab=36.75 E-value=1.1e+02 Score=21.68 Aligned_cols=74 Identities=18% Similarity=0.198 Sum_probs=44.8
Q ss_pred HHHhhhhh-ccH----HHHHHHHhcCCCcccchhhhhhhhhhhhc-ChHHHHHHhhhhHHHHHHHhhccccHHHHHHHHH
Q psy4702 45 PVCSMLLE-KNW----VDIFKQILAHPDVGVQHRALVIVGNILSA-GKELAERVLSTELMEILMALTLLEGEEVRKLALQ 118 (138)
Q Consensus 45 ~~c~~I~~-~~w----leil~~L~~~~~~~lqHRG~viv~Nmi~a-~~e~a~kl~es~~leiL~~~~k~~~~~v~~~a~e 118 (138)
.+|..|-. +.+ +..|..=+.+.|+.+|+|.+..+--++.. +......+-..+.++-|..+.+.+..+|.+...+
T Consensus 28 eicD~I~~~~~~~k~a~rai~Krl~~~n~~~ql~AL~LLe~~vkNcG~~f~~evas~~Fl~el~~l~~~~~~~Vk~kil~ 107 (140)
T 3ldz_A 28 DICDKVGQSRTGPKDCLRSIMRRVNHKDPHVAMQALTLLGACVSNCGKIFHLEVCSRDFASEVSNVLNKGHPKVCEKLKA 107 (140)
T ss_dssp HHHHHHTTSTTHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSCHHHHHHHSSHHHHHHHHHHHHHSCHHHHHHHHH
T ss_pred HHHHHHHCCCcCHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHhcCHHHHHHHhhHHHHHHHHHHhccCCHHHHHHHHH
Confidence 46666665 322 33333346789999999999988887764 4444455556666666666655433244444433
No 83
>2ysr_A DEP domain-containing protein 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=33.71 E-value=25 Score=24.35 Aligned_cols=44 Identities=18% Similarity=0.093 Sum_probs=31.4
Q ss_pred HHhhhhHHHHHHHhhccccH----HHHHHHHHHHHHHHhCCCccCCCC
Q psy4702 91 RVLSTELMEILMALTLLEGE----EVRKLALQALAKGEEYGIIRRPGE 134 (138)
Q Consensus 91 kl~es~~leiL~~~~k~~~~----~v~~~a~eaLk~~~~~glIk~~~~ 134 (138)
-+.-+++++.|+...+...+ .-.+.|++-..++++.|+|++-.+
T Consensus 40 CF~GsE~VdWL~~~l~~~~~fg~~~sR~eAv~lgq~Ll~~gvi~hV~~ 87 (105)
T 2ysr_A 40 CFTAGEAVDWLYDLLRNNSNFGPEVTRQQTIQLLRKFLKNHVIEDIKG 87 (105)
T ss_dssp CEEHHHHHHHHHHHHHHSSSSTTTCCHHHHHHHHHHHHHTTSSEESSC
T ss_pred cccchHHHHHHHHhcccccccCccCCHHHHHHHHHHHHHCCCeEeccC
Confidence 36677889999998554321 124667777788999999998654
No 84
>3zyq_A Hepatocyte growth factor-regulated tyrosine kinas substrate; signaling; 1.48A {Homo sapiens} PDB: 4avx_A*
Probab=32.83 E-value=1.3e+02 Score=23.06 Aligned_cols=63 Identities=21% Similarity=0.324 Sum_probs=39.4
Q ss_pred HHHhhhhh-----ccHHHHHHHHhcCCCcccchhhhhhhhhhhhc-ChHHHHHHhhhhHHHHHHHhhcc
Q psy4702 45 PVCSMLLE-----KNWVDIFKQILAHPDVGVQHRALVIVGNILSA-GKELAERVLSTELMEILMALTLL 107 (138)
Q Consensus 45 ~~c~~I~~-----~~wleil~~L~~~~~~~lqHRG~viv~Nmi~a-~~e~a~kl~es~~leiL~~~~k~ 107 (138)
.+|..|-. +.-+..|..=+.+.|+.+|.|.+.++--++.. +...-..+-..+.++-|..+.+.
T Consensus 31 eicD~I~~~~~~~k~a~ral~krl~~~n~~v~l~aL~LLe~~vkNcG~~f~~eias~~fl~~l~~l~~~ 99 (226)
T 3zyq_A 31 QICDLIRQGDTQAKYAVNSIKKKVNDKNPHVALYALEVMESVVKNCGQTVHDEVANKQTMEELKDLLKR 99 (226)
T ss_dssp HHHHHHHTTSSCHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHCHHHHHHHSSHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCccHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHhcchHHHHhhccHHHHHHHHHHhcc
Confidence 45555554 22334444446799999999999988887764 44444555555666666555443
No 85
>1dvp_A HRS, hepatocyte growth factor-regulated tyrosine kinase substrate; VHS, FYVE, zinc finger, superhelix, transferase; HET: CIT; 2.00A {Drosophila melanogaster} SCOP: a.118.9.2 g.50.1.1
Probab=32.80 E-value=1.3e+02 Score=22.72 Aligned_cols=62 Identities=18% Similarity=0.299 Sum_probs=42.0
Q ss_pred HHhhhhh-----ccHHHHHHHHhcCCCcccchhhhhhhhhhhhcChH-HHHHHhhhhHHHHHHHhhcc
Q psy4702 46 VCSMLLE-----KNWVDIFKQILAHPDVGVQHRALVIVGNILSAGKE-LAERVLSTELMEILMALTLL 107 (138)
Q Consensus 46 ~c~~I~~-----~~wleil~~L~~~~~~~lqHRG~viv~Nmi~a~~e-~a~kl~es~~leiL~~~~k~ 107 (138)
+|..|-. +.-+..|..=+.+.|+.+|.|.+.++-.++...+. .-..+-..+.++-|..+.+.
T Consensus 29 icd~i~~~~~~~k~a~r~l~krl~~~n~~~~l~aL~Lle~~vkNcG~~f~~eva~~~fl~~l~~l~~~ 96 (220)
T 1dvp_A 29 ICDEINQKDVTPKNAFAAIKKKMNSPNPHSSCYSLLVLESIVKNCGAPVHEEVFTKENCEMFSSFLES 96 (220)
T ss_dssp HHHHHHTTSSCHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSHHHHHHHHSSHHHHHHHHHHHHH
T ss_pred HHHhhcCCCcCHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhccCHHHHHHHHhHHHHHHHHHHhcC
Confidence 5666644 22233444445789999999999999998876544 44566666777777776654
No 86
>2iw3_A Elongation factor 3A; acetylation, ATP-binding, protein biosynthesis, nucleotide-binding, phosphorylation, RNA- binding, rRNA-binding; HET: ADP; 2.4A {Saccharomyces cerevisiae} PDB: 2iwh_A* 2ix3_A 2ix8_A
Probab=29.77 E-value=2.7e+02 Score=26.40 Aligned_cols=105 Identities=19% Similarity=0.237 Sum_probs=56.9
Q ss_pred hhhhhhcCCCCHHHHHhhhhh-hhhhccCCHHHHhhhhhccHHHHHHHHhcCCCcccchhhhhhhhhhhh-cChHHHHHH
Q psy4702 15 RFLFLLTCEEDTETACAAAGA-LAMLTSVSTPVCSMLLEKNWVDIFKQILAHPDVGVQHRALVIVGNILS-AGKELAERV 92 (138)
Q Consensus 15 klLvll~~eED~~tr~AA~GA-LAmLT~~~~~~c~~I~~~~wleil~~L~~~~~~~lqHRG~viv~Nmi~-a~~e~a~kl 92 (138)
-.++..+++-+...|.||.-| .|+.....|.+.+.++. .++..|-....=..+--++-++-.|+. +...++.++
T Consensus 98 ~~~~~~~~dk~~~v~~aa~~~~~~~~~~~~~~a~~~~~~----~~~~~~~~~~kw~~k~~~l~~~~~~~~~~~~~~~~~~ 173 (986)
T 2iw3_A 98 PAICTNAGNKDKEIQSVASETLISIVNAVNPVAIKALLP----HLTNAIVETNKWQEKIAILAAFSAMVDAAKDQVALRM 173 (986)
T ss_dssp HHHHHHTTCSSHHHHHHHHHHHHHHHHHSCGGGHHHHHH----HHHHHHHHCCCHHHHHHHHHHHHHHHHHSHHHHHHHH
T ss_pred HHHHHHhcCCchHHHHHHHHHHHHHHHhCCHHHHHHHHH----HHHHHhccccchHHHHHHHHHHHHHHHHhHHHHHHhc
Confidence 344555566667788888744 45555556666654432 222222111111112223344445553 334455444
Q ss_pred hhhhHHHHHHHhhccccHHHHHHHHHHHHHHHh
Q psy4702 93 LSTELMEILMALTLLEGEEVRKLALQALAKGEE 125 (138)
Q Consensus 93 ~es~~leiL~~~~k~~~~~v~~~a~eaLk~~~~ 125 (138)
.+++-+++.+.-.++.+|.+.|.+|+.++-.
T Consensus 174 --~~~~p~~~~~~~d~k~~v~~~~~~~~~~~~~ 204 (986)
T 2iw3_A 174 --PELIPVLSETMWDTKKEVKAAATAAMTKATE 204 (986)
T ss_dssp --HHHHHHHHHHTTCSSHHHHHHHHHHHHHHGG
T ss_pred --cchhcchHhhcccCcHHHHHHHHHHHHHHHh
Confidence 3456666666666666999999999988763
No 87
>1lrv_A LRV, leucine-rich repeat variant; leucine-rich repeats, repetitive structure, iron sulfur proteins, nitrogen fixation; 2.60A {Azotobacter vinelandii} SCOP: a.118.1.5
Probab=26.62 E-value=29 Score=27.15 Aligned_cols=59 Identities=12% Similarity=-0.010 Sum_probs=28.4
Q ss_pred hhhhhcCCCCHHHHHhhhhhh-----hhhccCCHHHHhhhhh-ccHHHHHHHHhcCCCcccchhh
Q psy4702 16 FLFLLTCEEDTETACAAAGAL-----AMLTSVSTPVCSMLLE-KNWVDIFKQILAHPDVGVQHRA 74 (138)
Q Consensus 16 lLvll~~eED~~tr~AA~GAL-----AmLT~~~~~~c~~I~~-~~wleil~~L~~~~~~~lqHRG 74 (138)
++..|++.+|+..|++|+..| ..|......-++.... .=..+.|..|+.|+++.+|+..
T Consensus 54 l~~~ll~d~~~~VR~~AA~~l~~~~l~~L~~D~~~~VR~~aA~~L~~~~L~~ll~D~d~~VR~~a 118 (244)
T 1lrv_A 54 LAVQYLADPFWERRAIAVRYSPVEALTPLIRDSDEVVRRAVAYRLPREQLSALMFDEDREVRITV 118 (244)
T ss_dssp GGGGGTTCSSHHHHHHHHTTSCGGGGGGGTTCSSHHHHHHHHTTSCSGGGGGTTTCSCHHHHHHH
T ss_pred HHHHHhcCCCHHHHHHHHHhCCHHHHHHHccCcCHHHHHHHHHHCCHHHHHHHHcCCCHHHHHHH
Confidence 344566777777777776543 1121111122222222 1112456666677777776553
No 88
>2xvc_A ESCRT-III, SSO0910; cell cycle, cell division, cytokinesis, winged-helix; 2.15A {Sulfolobus solfataricus}
Probab=26.61 E-value=20 Score=23.24 Aligned_cols=45 Identities=13% Similarity=0.181 Sum_probs=29.5
Q ss_pred cChHHHHHHhhhhHHHHHHHhhcc-ccHHHHHHHHHHHHHHHhCCCcc
Q psy4702 84 AGKELAERVLSTELMEILMALTLL-EGEEVRKLALQALAKGEEYGIIR 130 (138)
Q Consensus 84 a~~e~a~kl~es~~leiL~~~~k~-~~~~v~~~a~eaLk~~~~~glIk 130 (138)
.+.++=+.|+.+|++=-+..+++. .-+ .+....+|+.+.+.|||+
T Consensus 11 ~e~~lL~yIr~sGGildI~~~a~kygV~--kdeV~~~LrrLe~KGLI~ 56 (59)
T 2xvc_A 11 TERELLDYIVNNGGFLDIEHFSKVYGVE--KQEVVKLLEALKNKGLIA 56 (59)
T ss_dssp CHHHHHHHHHHTTSEEEHHHHHHHHCCC--HHHHHHHHHHHHHTTSEE
T ss_pred cHHHHHHHHHHcCCEEeHHHHHHHhCCC--HHHHHHHHHHHHHCCCee
Confidence 455666777777765444445443 111 356677899999999997
No 89
>4ffb_C Protein STU2; tubulin fold, heat repeats, cytoskeleton, microtubule, tubul domain, hydrolase; HET: GTP; 2.88A {Saccharomyces cerevisiae}
Probab=26.58 E-value=1e+02 Score=23.21 Aligned_cols=97 Identities=11% Similarity=0.080 Sum_probs=52.0
Q ss_pred CCCCHHHHHhhhhhhhhhccCCHHHHhhhhh-ccHHHHHHHHhcCCCcccchhhhhhhhhhhhcC--hHHHHHHhhhhHH
Q psy4702 22 CEEDTETACAAAGALAMLTSVSTPVCSMLLE-KNWVDIFKQILAHPDVGVQHRALVIVGNILSAG--KELAERVLSTELM 98 (138)
Q Consensus 22 ~eED~~tr~AA~GALAmLT~~~~~~c~~I~~-~~wleil~~L~~~~~~~lqHRG~viv~Nmi~a~--~e~a~kl~es~~l 98 (138)
+.....++.+|..++-.+-+ .... ...++.+...+.+.+|-++.-.+..+.+++..- +.+--+-.=..++
T Consensus 113 ~~~k~~~~~~a~~~l~~~~~-------~~~~~~~~~e~l~~~l~~Knpkv~~~~l~~l~~~l~~fg~~~~~~k~~l~~i~ 185 (278)
T 4ffb_C 113 TSSRATTKTQSMSCILSLCG-------LDTSITQSVELVIPFFEKKLPKLIAAAANCVYELMAAFGLTNVNVQTFLPELL 185 (278)
T ss_dssp SCCCHHHHHHHHHHHHHHHH-------TSSSSHHHHHHHGGGGGCSCHHHHHHHHHHHHHHHHHHTTTTCCHHHHHHHHG
T ss_pred cCccHHHHHHHHHHHHHHHH-------hcCcHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHhCCCcCCchhHHHHHH
Confidence 44455566555555433321 1111 334566666778888988888888888887531 1111111011223
Q ss_pred HHHHHhhccccHHHHHHHHHHHHHHHh
Q psy4702 99 EILMALTLLEGEEVRKLALQALAKGEE 125 (138)
Q Consensus 99 eiL~~~~k~~~~~v~~~a~eaLk~~~~ 125 (138)
+.|..+...++..|++.|.+++-.+..
T Consensus 186 ~~l~k~l~d~~~~VR~aA~~l~~~ly~ 212 (278)
T 4ffb_C 186 KHVPQLAGHGDRNVRSQTMNLIVEIYK 212 (278)
T ss_dssp GGHHHHHTCSSHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHhCCcHHHHHHHHHHHHHHHH
Confidence 333333333333899999998877764
No 90
>3l9t_A Putative uncharacterized protein SMU.31; hypothetical protein, unknown function; HET: EPE; 2.21A {Streptococcus mutans}
Probab=24.61 E-value=80 Score=25.29 Aligned_cols=57 Identities=11% Similarity=-0.010 Sum_probs=36.4
Q ss_pred CCCh-hhhhhhhcCCCCHHHHHhhhhhhhhhccCCHHHHhhhhh-ccHHHHHHHHhcCCCccc
Q psy4702 10 YCSQ-VRFLFLLTCEEDTETACAAAGALAMLTSVSTPVCSMLLE-KNWVDIFKQILAHPDVGV 70 (138)
Q Consensus 10 ~n~R-lklLvll~~eED~~tr~AA~GALAmLT~~~~~~c~~I~~-~~wleil~~L~~~~~~~l 70 (138)
+.++ +.++...+..+|+-+||+|+.++-.-+. .+. -..+ ..-+.+|..|..|++.=|
T Consensus 136 ~pe~~l~~~~~W~~d~n~~VRR~Ase~~rpW~~-~~~---~k~dp~~ll~iL~~L~~D~s~yV 194 (240)
T 3l9t_A 136 EYKKALPIIDEWLKSSNLHTRRAATEGLRIWTN-RPY---FKENPNEAIRRIADLKEDVSEYV 194 (240)
T ss_dssp CTTTTHHHHHHHHHCSSHHHHHHHHHHTCSGGG-STT---TTTCHHHHHHHHHTTTTCSCHHH
T ss_pred CHHHHHHHHHHHhcCCCHHHHHHHHHhhHHHhc-cch---hhcCHHHHHHHHHHhcCChHHHH
Confidence 3444 6788889999999999999988764333 110 1122 445666666666666555
No 91
>3lys_A Prophage PI2 protein 01, integrase; helical N-terminal domain, structural genomics, PSI-2, protein structure initiative; 2.80A {Lactococcus lactis}
Probab=23.32 E-value=1.5e+02 Score=18.77 Aligned_cols=44 Identities=7% Similarity=-0.016 Sum_probs=29.9
Q ss_pred HhhhhHHHHHHHhhcc-cc---HHHHHHHHHHHHHHHhCCCccCCCCC
Q psy4702 92 VLSTELMEILMALTLL-EG---EEVRKLALQALAKGEEYGIIRRPGEG 135 (138)
Q Consensus 92 l~es~~leiL~~~~k~-~~---~~v~~~a~eaLk~~~~~glIk~~~~~ 135 (138)
|-...+.+.+..+.+. +. +.+...-..+++.|+++|+|..|.-.
T Consensus 51 It~~~i~~~~~~l~~~~s~~t~~~~~~~l~~i~~~Av~~g~i~~NP~~ 98 (112)
T 3lys_A 51 ITASSYQRALNKFAETHAKASTKGFHTRVRASIQCLIEEGRLQKDFTT 98 (112)
T ss_dssp CCHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHTTSCSSCTTS
T ss_pred CCHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHCCCcccCccc
Confidence 3444455555555443 22 27788888999999999999976543
No 92
>3u0r_A Apoptosis inhibitor 5; heat repeat, armadillo repeat, lysine acetylation; 2.50A {Homo sapiens} PDB: 3v6a_A
Probab=23.22 E-value=61 Score=28.82 Aligned_cols=46 Identities=22% Similarity=0.192 Sum_probs=33.7
Q ss_pred hhhhhcCCCCHHHHHhhhhhhhhhccCCHHHHhhhhhccHHHHHHHHhcCCCc
Q psy4702 16 FLFLLTCEEDTETACAAAGALAMLTSVSTPVCSMLLEKNWVDIFKQILAHPDV 68 (138)
Q Consensus 16 lLvll~~eED~~tr~AA~GALAmLT~~~~~~c~~I~~~~wleil~~L~~~~~~ 68 (138)
=++=||++||...|..|--+|-.+.- + .-+ ++-.+||..|+..+++
T Consensus 69 a~lDLcEDed~~IR~qaik~Lp~~ck-~-~~i-----~kiaDvL~QlLqtdd~ 114 (507)
T 3u0r_A 69 AQLDLCEDEDVSIRRQAIKELPQFAT-G-ENL-----PRVADILTQLLQTDDS 114 (507)
T ss_dssp HHHHHHTCSSHHHHHHHHHHGGGGCC-T-TCH-----HHHHHHHHHHTTCCCH
T ss_pred HHHHHHhcccHHHHHHHHHhhHHHhh-h-hhh-----hhHHHHHHHHHhccch
Confidence 35668999999999999888876653 2 222 5667888888877664
No 93
>3u5c_Z RP45, S31, YS23, 40S ribosomal protein S25-A; translation, ribosome, ribosomal, ribosomal R ribosomal protein, eukaryotic ribosome, RNA-protein C; 3.00A {Saccharomyces cerevisiae} PDB: 3izb_V 3o30_Q 3o2z_Q 3u5g_Z
Probab=21.64 E-value=32 Score=24.60 Aligned_cols=20 Identities=40% Similarity=0.323 Sum_probs=18.0
Q ss_pred HHHHHHHHHHHHhCCCccCC
Q psy4702 113 RKLALQALAKGEEYGIIRRP 132 (138)
Q Consensus 113 ~~~a~eaLk~~~~~glIk~~ 132 (138)
..+|+.+|+.|+..|+|++-
T Consensus 73 gSLAR~aLreL~~kGlIk~V 92 (108)
T 3u5c_Z 73 GSLARIALRHLEKEGIIKPI 92 (108)
T ss_dssp TTHHHHHHHHHSSSSSCEEE
T ss_pred HHHHHHHHHHHHHCCCEEEE
Confidence 57899999999999999973
No 94
>2i9c_A Hypothetical protein RPA1889; structural genomics, SAD, PSI-2, protein structure initiativ midwest center for structural genomics; HET: MSE; 2.00A {Rhodopseudomonas palustris} SCOP: a.118.1.25
Probab=21.23 E-value=88 Score=22.65 Aligned_cols=65 Identities=14% Similarity=0.026 Sum_probs=39.2
Q ss_pred HHHHHHHHhcCCCcccchhhhhhhhhhhhcChHHHHHHhhhhHHHHHHHhhccccHHHHHHHHHHHHHHHhCCCccC
Q psy4702 55 WVDIFKQILAHPDVGVQHRALVIVGNILSAGKELAERVLSTELMEILMALTLLEGEEVRKLALQALAKGEEYGIIRR 131 (138)
Q Consensus 55 wleil~~L~~~~~~~lqHRG~viv~Nmi~a~~e~a~kl~es~~leiL~~~~k~~~~~v~~~a~eaLk~~~~~glIk~ 131 (138)
+-+.|..|+.|||+.++-..++-+.. -+.+-|.+ +|-.+++...-..-=-|..||+...+ |--+|
T Consensus 58 ~R~aLl~Ll~H~n~~VRl~AA~~~L~---~~p~~A~~--------vLe~ia~~~~~~~~f~A~m~L~~we~-G~~~p 122 (123)
T 2i9c_A 58 QRTALLSLFEYPNMQVRLQAAKLTLA---VAPVKARE--------QLEAIVSSKWFPQAGDAGMCLDLLDD-GTFKP 122 (123)
T ss_dssp GGGGGGGGGGSSCHHHHHHHHHTTTT---TCHHHHHH--------HHHHHHHHTCTTHHHHHHHHHHHHHH-SSCCC
T ss_pred HHHHHHHHHhCCCccHHHHHHHHHHh---hChHHHHH--------HHHHHHhCCCCCccccHHHHHHHHHc-CCCCC
Confidence 44567778889998887777755444 23333444 66677665422233446677877765 55554
No 95
>2iw3_A Elongation factor 3A; acetylation, ATP-binding, protein biosynthesis, nucleotide-binding, phosphorylation, RNA- binding, rRNA-binding; HET: ADP; 2.4A {Saccharomyces cerevisiae} PDB: 2iwh_A* 2ix3_A 2ix8_A
Probab=20.90 E-value=2.5e+02 Score=26.61 Aligned_cols=66 Identities=20% Similarity=0.308 Sum_probs=38.6
Q ss_pred HHHHHhcCCCcccchhhhhhhhhhhh--cChHHHHHHhhhhHHHHHHHhhcc-ccHHHHHHHHHHHHHHH
Q psy4702 58 IFKQILAHPDVGVQHRALVIVGNILS--AGKELAERVLSTELMEILMALTLL-EGEEVRKLALQALAKGE 124 (138)
Q Consensus 58 il~~L~~~~~~~lqHRG~viv~Nmi~--a~~e~a~kl~es~~leiL~~~~k~-~~~~v~~~a~eaLk~~~ 124 (138)
+|.+=+.+....++...+|||-||-. .+...+..+.-. ++--|...... ++.++++.|.+|++.+.
T Consensus 255 ~l~r~l~~~~~~~~r~~~~~~~n~~~lv~~~~~~~~f~~~-l~p~~~~~~~~~~~pe~r~~~~~a~~~l~ 323 (986)
T 2iw3_A 255 LLSRGLNERETGIKRKSAVIIDNMCKLVEDPQVIAPFLGK-LLPGLKSNFATIADPEAREVTLRALKTLR 323 (986)
T ss_dssp HHHHHHTSSSHHHHHHHHHHHHHHHTTCCCHHHHHHHHTT-THHHHHHHTTTCCSHHHHHHHHHHHHHHH
T ss_pred HHHhhhccCcchhheeeEEEEcchhhhcCCHHHHhhhhhh-hhhHHHHHhhccCCHHHHHHHHHHHHHHH
Confidence 33333456677788888999999954 666666554322 22222222222 33377777777776664
No 96
>3u0r_A Apoptosis inhibitor 5; heat repeat, armadillo repeat, lysine acetylation; 2.50A {Homo sapiens} PDB: 3v6a_A
Probab=20.84 E-value=2.1e+02 Score=25.36 Aligned_cols=63 Identities=17% Similarity=0.187 Sum_probs=39.2
Q ss_pred ccHHHHHHHHhcCCCcccchhhhhhhhhhhhcCh-HHHHHHhhhhHHHHHHHhhccccHHHHHHHHHHHHHH
Q psy4702 53 KNWVDIFKQILAHPDVGVQHRALVIVGNILSAGK-ELAERVLSTELMEILMALTLLEGEEVRKLALQALAKG 123 (138)
Q Consensus 53 ~~wleil~~L~~~~~~~lqHRG~viv~Nmi~a~~-e~a~kl~es~~leiL~~~~k~~~~~v~~~a~eaLk~~ 123 (138)
..-++-+..||.|++.++|--| ++++..=.+ +.-.| +.+||..+.+.++..-+.....+|-.+
T Consensus 64 ~~Ai~a~lDLcEDed~~IR~qa---ik~Lp~~ck~~~i~k-----iaDvL~QlLqtdd~~E~~~V~~sL~sl 127 (507)
T 3u0r_A 64 DSAINAQLDLCEDEDVSIRRQA---IKELPQFATGENLPR-----VADILTQLLQTDDSAEFNLVNNALLSI 127 (507)
T ss_dssp HHHHHHHHHHHTCSSHHHHHHH---HHHGGGGCCTTCHHH-----HHHHHHHHTTCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcccHHHHHHH---HHhhHHHhhhhhhhh-----HHHHHHHHHhccchHHHHHHHHHHHHH
Confidence 5667889999999999997644 455533111 44444 478888888765432234444444443
No 97
>1juq_A ADP-ribosylation factor binding protein GGA3; protein-peptide compelx, VHS domain, DXXLL sorting signal, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.9.2 PDB: 1jpl_A 1lf8_A*
Probab=20.83 E-value=2.5e+02 Score=20.56 Aligned_cols=62 Identities=11% Similarity=0.156 Sum_probs=41.5
Q ss_pred HHHhhhhh-c----cHHHHHHHHhcCCCcccchhhhhhhhhhhhcCh-HHHHHHhhhhHHHHHHHhhc
Q psy4702 45 PVCSMLLE-K----NWVDIFKQILAHPDVGVQHRALVIVGNILSAGK-ELAERVLSTELMEILMALTL 106 (138)
Q Consensus 45 ~~c~~I~~-~----~wleil~~L~~~~~~~lqHRG~viv~Nmi~a~~-e~a~kl~es~~leiL~~~~k 106 (138)
.+|..|-. + .-+..|..-+.+.|+-+|+|.+.++--++...+ .....+-..+.++-|..+.+
T Consensus 36 eicD~I~~~~~~~k~A~ral~krl~~~n~~vql~AL~LLd~~vkNCG~~Fh~evas~~Fl~eL~kl~~ 103 (171)
T 1juq_A 36 GFCDQINKELEGPQIAVRLLAHKIQSPQEWEALQALTVLEACMKNCGRRFHNEVGKFRFLNELIKVVS 103 (171)
T ss_dssp HHHHHHHHSTTHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSHHHHHHHHTSHHHHHHHHHHHC
T ss_pred HHHHHHHcCCccHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHcCHHHHHHHhhHHHHHHHHHHhc
Confidence 45555544 2 223344444578999999999999988887544 44556667777777777765
No 98
>2khv_A Phage integrase; solution structure, GFT, NESG, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Nitrosospira multiformis atcc 25196}
Probab=20.74 E-value=1.6e+02 Score=18.40 Aligned_cols=42 Identities=12% Similarity=-0.006 Sum_probs=27.3
Q ss_pred hhhhHHHHHHHhhcc-cc--HHHHHHHHHHHHHHHhCCCccC-CCC
Q psy4702 93 LSTELMEILMALTLL-EG--EEVRKLALQALAKGEEYGIIRR-PGE 134 (138)
Q Consensus 93 ~es~~leiL~~~~k~-~~--~~v~~~a~eaLk~~~~~glIk~-~~~ 134 (138)
-...+.+++..+.+. .. +.+...-..+++.|+++|+|.. |+-
T Consensus 48 t~~~i~~~~~~l~~~~~~t~~~~~~~l~~i~~~Av~~~~i~~~NP~ 93 (106)
T 2khv_A 48 DTKLIMKVLDPIWEQKPETASRLRGRIESVLDWATVRGYREGDNPA 93 (106)
T ss_dssp CHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTSSCSCCTT
T ss_pred CHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHcCCcCCCCch
Confidence 334444455444322 11 2778888899999999999987 653
Done!