Query psy4703
Match_columns 401
No_of_seqs 402 out of 2953
Neff 7.6
Searched_HMMs 29240
Date Fri Aug 16 23:43:19 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy4703.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/4703hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3now_A UNC-45 protein, SD10334 100.0 8.2E-34 2.8E-38 305.5 19.4 170 209-385 325-500 (810)
2 3opb_A SWI5-dependent HO expre 100.0 2.4E-28 8.4E-33 259.2 23.0 233 137-386 204-463 (778)
3 4gco_A Protein STI-1; structur 99.9 6E-22 2.1E-26 166.5 17.4 120 2-125 6-125 (126)
4 3rkv_A Putative peptidylprolyl 99.8 1.4E-19 4.8E-24 156.9 13.4 129 5-133 7-150 (162)
5 2hr2_A Hypothetical protein; a 99.8 4.6E-19 1.6E-23 155.2 13.5 125 6-131 8-152 (159)
6 3gyz_A Chaperone protein IPGC; 99.8 3.4E-18 1.2E-22 148.7 16.6 111 1-115 28-138 (151)
7 3upv_A Heat shock protein STI1 99.8 3.6E-18 1.2E-22 141.3 15.5 118 6-127 1-124 (126)
8 4gyw_A UDP-N-acetylglucosamine 99.8 1E-17 3.6E-22 180.0 21.6 164 4-179 4-168 (723)
9 2xcb_A PCRH, regulatory protei 99.8 1.6E-17 5.6E-22 141.0 17.8 127 1-131 10-136 (142)
10 2pl2_A Hypothetical conserved 99.8 1.4E-17 4.8E-22 151.9 17.8 161 6-178 2-173 (217)
11 4gcn_A Protein STI-1; structur 99.8 6.9E-18 2.4E-22 141.5 14.4 112 5-121 4-122 (127)
12 2vgx_A Chaperone SYCD; alterna 99.8 1.5E-17 5.2E-22 143.2 16.9 125 2-130 14-138 (148)
13 2pl2_A Hypothetical conserved 99.8 2.6E-17 8.9E-22 150.2 18.2 162 2-176 32-205 (217)
14 4ga2_A E3 SUMO-protein ligase 99.8 5E-18 1.7E-22 146.4 12.1 122 2-127 24-146 (150)
15 1p5q_A FKBP52, FK506-binding p 99.8 3.2E-17 1.1E-21 160.2 19.4 144 3-150 141-296 (336)
16 3sz7_A HSC70 cochaperone (SGT) 99.7 6E-17 2.1E-21 140.4 18.4 113 3-119 5-117 (164)
17 1kt0_A FKBP51, 51 kDa FK506-bi 99.7 2E-17 6.9E-22 168.4 17.6 145 3-151 262-418 (457)
18 3urz_A Uncharacterized protein 99.7 1.5E-16 5E-21 144.2 19.8 121 7-131 2-138 (208)
19 3vtx_A MAMA; tetratricopeptide 99.7 3.6E-16 1.2E-20 137.2 20.6 158 7-176 3-161 (184)
20 4i17_A Hypothetical protein; T 99.7 7E-16 2.4E-20 140.2 23.1 160 6-170 4-167 (228)
21 2h6f_A Protein farnesyltransfe 99.7 1.5E-16 5E-21 158.8 17.2 155 2-168 90-246 (382)
22 4ga2_A E3 SUMO-protein ligase 99.7 2.5E-17 8.6E-22 141.9 9.7 139 15-164 3-142 (150)
23 3q49_B STIP1 homology and U bo 99.7 3.8E-16 1.3E-20 129.9 16.1 123 3-129 3-130 (137)
24 2fbn_A 70 kDa peptidylprolyl i 99.7 4.3E-16 1.5E-20 139.2 17.1 130 5-135 34-176 (198)
25 2h6f_A Protein farnesyltransfe 99.7 1.3E-16 4.4E-21 159.2 14.7 162 2-170 124-288 (382)
26 3vtx_A MAMA; tetratricopeptide 99.7 1.2E-15 4.1E-20 133.8 16.2 139 2-152 32-170 (184)
27 2dba_A Smooth muscle cell asso 99.7 1.7E-15 5.8E-20 126.8 16.1 122 3-125 22-143 (148)
28 4gyw_A UDP-N-acetylglucosamine 99.7 3.7E-16 1.2E-20 168.0 15.0 133 2-138 36-168 (723)
29 2vyi_A SGTA protein; chaperone 99.7 3.1E-15 1.1E-19 121.6 16.8 123 3-129 6-128 (131)
30 4i17_A Hypothetical protein; T 99.7 2.2E-15 7.6E-20 136.8 17.6 126 2-131 34-169 (228)
31 1ihg_A Cyclophilin 40; ppiase 99.7 6.7E-16 2.3E-20 153.2 14.6 127 6-136 220-362 (370)
32 1elw_A TPR1-domain of HOP; HOP 99.7 6.3E-15 2.2E-19 117.8 17.0 115 7-125 2-116 (118)
33 2lni_A Stress-induced-phosphop 99.7 2.3E-15 7.7E-20 123.5 14.7 121 4-128 11-131 (133)
34 1a17_A Serine/threonine protei 99.6 2.6E-14 9E-19 121.8 21.0 126 7-136 11-138 (166)
35 2if4_A ATFKBP42; FKBP-like, al 99.6 1.8E-16 6.2E-21 155.1 8.2 139 4-153 174-329 (338)
36 2y4t_A DNAJ homolog subfamily 99.6 4E-13 1.4E-17 133.2 32.1 173 2-178 19-199 (450)
37 3qky_A Outer membrane assembly 99.6 1.1E-14 3.7E-19 135.4 18.8 118 3-121 9-137 (261)
38 2q7f_A YRRB protein; TPR, prot 99.6 2.9E-14 9.8E-19 129.1 20.3 124 4-131 52-175 (243)
39 3qky_A Outer membrane assembly 99.6 1.3E-14 4.4E-19 134.8 18.3 153 2-156 42-228 (261)
40 2xev_A YBGF; tetratricopeptide 99.6 1E-14 3.5E-19 119.9 15.4 117 10-127 3-122 (129)
41 4gco_A Protein STI-1; structur 99.6 5E-15 1.7E-19 123.9 13.5 116 34-161 4-120 (126)
42 1w3b_A UDP-N-acetylglucosamine 99.6 3.2E-14 1.1E-18 139.2 21.2 161 2-174 128-289 (388)
43 1elr_A TPR2A-domain of HOP; HO 99.6 1.1E-14 3.8E-19 118.5 15.0 120 6-130 1-127 (131)
44 1hxi_A PEX5, peroxisome target 99.6 4.5E-15 1.5E-19 123.3 12.6 104 9-116 17-120 (121)
45 2c2l_A CHIP, carboxy terminus 99.6 2.1E-14 7.2E-19 136.4 18.3 106 6-115 1-106 (281)
46 3ieg_A DNAJ homolog subfamily 99.6 7.8E-13 2.7E-17 125.8 29.3 209 8-229 2-221 (359)
47 3hym_B Cell division cycle pro 99.6 5.1E-14 1.7E-18 132.9 20.8 217 2-239 83-313 (330)
48 3u4t_A TPR repeat-containing p 99.6 3.6E-14 1.2E-18 131.1 19.0 160 2-171 30-191 (272)
49 2vq2_A PILW, putative fimbrial 99.6 6.6E-14 2.3E-18 124.7 20.0 161 3-175 2-166 (225)
50 4eqf_A PEX5-related protein; a 99.6 2.7E-14 9.3E-19 138.3 18.1 157 8-176 64-267 (365)
51 3gyz_A Chaperone protein IPGC; 99.6 3.2E-15 1.1E-19 129.8 10.4 116 30-157 23-138 (151)
52 1w3b_A UDP-N-acetylglucosamine 99.6 2.2E-14 7.4E-19 140.4 17.5 163 2-176 162-325 (388)
53 2yhc_A BAMD, UPF0169 lipoprote 99.6 5.3E-14 1.8E-18 128.5 19.0 164 8-173 3-201 (225)
54 3as5_A MAMA; tetratricopeptide 99.6 6.2E-14 2.1E-18 120.6 18.4 159 5-175 4-163 (186)
55 4abn_A Tetratricopeptide repea 99.6 9.8E-15 3.4E-19 149.1 15.5 162 3-177 96-279 (474)
56 1na0_A Designed protein CTPR3; 99.6 6E-14 2.1E-18 112.9 16.7 119 5-127 4-123 (125)
57 4abn_A Tetratricopeptide repea 99.6 2.1E-14 7.2E-19 146.6 17.3 114 22-140 81-204 (474)
58 2ho1_A Type 4 fimbrial biogene 99.6 2.1E-13 7.3E-18 124.6 22.4 160 4-175 31-194 (252)
59 3urz_A Uncharacterized protein 99.6 1.9E-14 6.6E-19 130.2 15.1 118 2-124 31-199 (208)
60 3uq3_A Heat shock protein STI1 99.6 1.2E-13 4.1E-18 125.7 20.1 103 6-113 2-111 (258)
61 2ho1_A Type 4 fimbrial biogene 99.6 7.1E-14 2.4E-18 127.8 18.3 159 2-172 64-225 (252)
62 4eqf_A PEX5-related protein; a 99.6 9.6E-14 3.3E-18 134.4 19.8 111 27-138 45-156 (365)
63 3as5_A MAMA; tetratricopeptide 99.6 1.1E-13 3.8E-18 119.0 18.0 131 2-136 35-165 (186)
64 3hym_B Cell division cycle pro 99.6 4.4E-13 1.5E-17 126.4 23.4 122 6-131 19-141 (330)
65 2e2e_A Formate-dependent nitri 99.6 6.3E-14 2.2E-18 122.3 16.2 120 2-125 37-159 (177)
66 2pzi_A Probable serine/threoni 99.6 6.2E-15 2.1E-19 157.3 11.6 153 3-168 427-580 (681)
67 2vq2_A PILW, putative fimbrial 99.6 1E-13 3.5E-18 123.4 17.6 138 2-151 35-175 (225)
68 2kck_A TPR repeat; tetratricop 99.6 1.6E-14 5.4E-19 114.5 10.7 107 5-115 2-111 (112)
69 1hh8_A P67PHOX, NCF-2, neutrop 99.6 1.7E-13 5.8E-18 122.4 18.8 133 6-153 3-151 (213)
70 2q7f_A YRRB protein; TPR, prot 99.6 9.6E-14 3.3E-18 125.6 17.1 204 8-232 22-229 (243)
71 3uq3_A Heat shock protein STI1 99.6 5.6E-14 1.9E-18 127.9 15.1 161 7-176 36-227 (258)
72 3ieg_A DNAJ homolog subfamily 99.6 4.4E-13 1.5E-17 127.5 21.8 162 2-175 30-207 (359)
73 1fch_A Peroxisomal targeting s 99.5 5.4E-13 1.8E-17 128.5 22.4 154 9-175 64-236 (368)
74 2y4t_A DNAJ homolog subfamily 99.5 9.1E-14 3.1E-18 137.8 17.0 152 13-174 261-414 (450)
75 1fch_A Peroxisomal targeting s 99.5 3.4E-13 1.2E-17 129.8 20.0 160 2-173 91-302 (368)
76 2vsy_A XCC0866; transferase, g 99.5 9.8E-14 3.3E-18 144.0 17.3 131 2-136 16-149 (568)
77 1xnf_A Lipoprotein NLPI; TPR, 99.5 3.8E-13 1.3E-17 123.9 19.3 114 5-122 39-152 (275)
78 3k9i_A BH0479 protein; putativ 99.5 4.1E-14 1.4E-18 115.8 9.9 98 21-119 2-99 (117)
79 2fo7_A Synthetic consensus TPR 99.5 5.5E-13 1.9E-17 108.1 16.1 123 10-136 2-124 (136)
80 2pzi_A Probable serine/threoni 99.5 9.5E-14 3.2E-18 148.2 14.3 155 3-173 388-551 (681)
81 3u4t_A TPR repeat-containing p 99.5 2.4E-13 8.1E-18 125.5 15.1 142 9-163 3-149 (272)
82 3cv0_A Peroxisome targeting si 99.5 2.1E-12 7.3E-17 121.5 21.6 157 7-175 19-191 (327)
83 2vgx_A Chaperone SYCD; alterna 99.5 1.8E-13 6.2E-18 117.5 12.4 111 29-151 7-117 (148)
84 1zu2_A Mitochondrial import re 99.5 7.2E-14 2.5E-18 122.0 9.9 100 20-123 13-133 (158)
85 3qou_A Protein YBBN; thioredox 99.5 5.2E-13 1.8E-17 127.0 16.7 163 5-179 113-278 (287)
86 1wao_1 Serine/threonine protei 99.5 4.1E-14 1.4E-18 144.9 9.2 117 5-125 2-118 (477)
87 2r5s_A Uncharacterized protein 99.5 2.3E-13 7.8E-18 119.4 12.6 162 5-179 2-167 (176)
88 4gcn_A Protein STI-1; structur 99.5 3.7E-13 1.3E-17 112.4 13.0 111 45-156 6-116 (127)
89 3fp2_A TPR repeat-containing p 99.5 4.5E-12 1.6E-16 128.3 23.2 212 9-239 243-471 (537)
90 2xpi_A Anaphase-promoting comp 99.5 3E-12 1E-16 131.8 21.9 208 3-231 367-585 (597)
91 2yhc_A BAMD, UPF0169 lipoprote 99.5 1.1E-12 3.7E-17 119.8 16.3 135 8-151 40-212 (225)
92 4g1t_A Interferon-induced prot 99.5 3.2E-12 1.1E-16 127.8 20.2 158 7-169 49-222 (472)
93 2e2e_A Formate-dependent nitri 99.5 3.2E-13 1.1E-17 117.8 11.0 128 15-154 16-146 (177)
94 2gw1_A Mitochondrial precursor 99.4 7.9E-12 2.7E-16 125.4 22.1 213 5-239 233-458 (514)
95 2xcb_A PCRH, regulatory protei 99.4 6.3E-13 2.1E-17 112.5 11.8 110 30-151 5-114 (142)
96 3fp2_A TPR repeat-containing p 99.4 1E-12 3.5E-17 133.1 15.2 128 4-136 272-399 (537)
97 1xnf_A Lipoprotein NLPI; TPR, 99.4 2.6E-12 9E-17 118.3 16.6 124 19-151 15-139 (275)
98 3cv0_A Peroxisome targeting si 99.4 1.4E-12 4.7E-17 122.9 14.3 130 3-136 166-307 (327)
99 2xpi_A Anaphase-promoting comp 99.4 1.1E-11 3.6E-16 127.6 21.8 159 6-173 302-492 (597)
100 1hh8_A P67PHOX, NCF-2, neutrop 99.4 2.8E-12 9.7E-17 114.4 15.2 104 8-115 36-155 (213)
101 2gw1_A Mitochondrial precursor 99.4 1.6E-12 5.3E-17 130.6 14.7 158 3-172 298-465 (514)
102 3qou_A Protein YBBN; thioredox 99.4 9.4E-13 3.2E-17 125.3 12.3 133 2-138 144-278 (287)
103 2l6j_A TPR repeat-containing p 99.4 1.5E-13 5.2E-18 109.5 5.3 96 7-106 2-103 (111)
104 2r5s_A Uncharacterized protein 99.4 1.2E-12 4.2E-17 114.6 11.4 131 1-136 32-165 (176)
105 3upv_A Heat shock protein STI1 99.4 5.2E-12 1.8E-16 103.8 14.3 92 45-136 2-93 (126)
106 2fo7_A Synthetic consensus TPR 99.4 3.4E-12 1.2E-16 103.4 12.8 108 3-114 29-136 (136)
107 3edt_B KLC 2, kinesin light ch 99.4 3.1E-12 1.1E-16 117.4 14.1 135 4-138 38-192 (283)
108 3mkr_A Coatomer subunit epsilo 99.4 1E-11 3.5E-16 118.6 18.1 99 7-114 63-163 (291)
109 2vsy_A XCC0866; transferase, g 99.4 3.5E-12 1.2E-16 132.2 15.7 136 22-169 2-138 (568)
110 3mkr_A Coatomer subunit epsilo 99.4 8.5E-12 2.9E-16 119.1 16.8 133 6-151 127-263 (291)
111 1p5q_A FKBP52, FK506-binding p 99.4 6E-13 2.1E-17 129.7 8.8 147 21-179 125-287 (336)
112 1qqe_A Vesicular transport pro 99.4 5.9E-12 2E-16 119.7 14.5 136 7-151 75-227 (292)
113 4a1s_A PINS, partner of inscut 99.3 4.7E-11 1.6E-15 116.9 20.1 124 6-130 45-181 (411)
114 1qqe_A Vesicular transport pro 99.3 1.1E-11 3.7E-16 117.9 14.9 134 9-151 37-186 (292)
115 2ond_A Cleavage stimulation fa 99.3 1.3E-11 4.4E-16 118.0 14.9 159 2-172 43-219 (308)
116 2ond_A Cleavage stimulation fa 99.3 2.1E-11 7.3E-16 116.4 16.1 139 2-152 91-232 (308)
117 2kat_A Uncharacterized protein 99.3 2.2E-11 7.5E-16 98.6 13.6 85 27-115 3-87 (115)
118 4g1t_A Interferon-induced prot 99.3 2.1E-11 7.2E-16 121.8 16.4 169 4-176 89-267 (472)
119 3ro2_A PINS homolog, G-protein 99.3 1.8E-10 6.3E-15 107.6 21.6 123 7-130 3-138 (338)
120 3sz7_A HSC70 cochaperone (SGT) 99.3 2.6E-11 8.9E-16 104.5 14.6 100 44-151 8-107 (164)
121 3sf4_A G-protein-signaling mod 99.3 2.4E-11 8.2E-16 117.8 15.7 131 5-136 83-248 (406)
122 1hxi_A PEX5, peroxisome target 99.3 4E-11 1.4E-15 99.1 14.3 96 48-151 18-113 (121)
123 3ulq_A Response regulator aspa 99.3 2E-11 6.8E-16 119.6 14.6 161 14-175 108-283 (383)
124 1ouv_A Conserved hypothetical 99.3 1.3E-10 4.4E-15 108.1 19.2 130 5-152 2-143 (273)
125 3sf4_A G-protein-signaling mod 99.3 1.2E-10 4E-15 112.9 19.5 124 6-130 6-142 (406)
126 2fbn_A 70 kDa peptidylprolyl i 99.3 7.6E-12 2.6E-16 111.4 10.1 148 14-173 9-173 (198)
127 3edt_B KLC 2, kinesin light ch 99.3 2.3E-11 7.9E-16 111.5 13.5 107 4-110 80-198 (283)
128 3nf1_A KLC 1, kinesin light ch 99.3 2.5E-11 8.4E-16 113.3 13.6 133 4-136 22-174 (311)
129 1kt0_A FKBP51, 51 kDa FK506-bi 99.3 2.9E-12 1E-16 130.2 7.7 140 22-173 247-402 (457)
130 3nf1_A KLC 1, kinesin light ch 99.3 5.2E-11 1.8E-15 111.1 14.8 135 4-138 64-218 (311)
131 1na3_A Designed protein CTPR2; 99.3 6.8E-11 2.3E-15 90.6 12.7 80 46-125 8-87 (91)
132 1dce_A Protein (RAB geranylger 99.3 6.1E-11 2.1E-15 124.0 16.4 123 2-128 56-191 (567)
133 3dra_A Protein farnesyltransfe 99.3 1.3E-10 4.3E-15 112.5 17.3 165 1-171 59-235 (306)
134 1a17_A Serine/threonine protei 99.3 4E-11 1.4E-15 101.8 12.0 105 2-110 40-146 (166)
135 2lni_A Stress-induced-phosphop 99.3 8.5E-11 2.9E-15 95.8 13.2 101 43-151 12-112 (133)
136 3q49_B STIP1 homology and U bo 99.2 1.1E-10 3.8E-15 96.4 13.4 93 44-136 6-98 (137)
137 1na3_A Designed protein CTPR2; 99.2 1E-10 3.5E-15 89.6 12.1 86 6-95 6-91 (91)
138 1ouv_A Conserved hypothetical 99.2 5.6E-10 1.9E-14 103.7 19.4 129 6-152 35-179 (273)
139 2hr2_A Hypothetical protein; a 99.2 6.1E-11 2.1E-15 103.6 11.7 98 46-151 10-130 (159)
140 2vyi_A SGTA protein; chaperone 99.2 3.6E-10 1.2E-14 91.2 15.6 119 44-170 9-128 (131)
141 3ulq_A Response regulator aspa 99.2 5.8E-11 2E-15 116.2 12.9 108 5-112 180-295 (383)
142 3rkv_A Putative peptidylprolyl 99.2 6E-11 2.1E-15 102.0 11.4 100 45-152 9-126 (162)
143 3dss_A Geranylgeranyl transfer 99.2 3.6E-09 1.2E-13 103.2 25.3 124 1-128 56-192 (331)
144 2kc7_A BFR218_protein; tetratr 99.2 2.1E-11 7E-16 95.8 7.4 91 13-115 4-95 (99)
145 3ro3_A PINS homolog, G-protein 99.2 1.6E-10 5.3E-15 96.5 13.3 130 6-136 6-150 (164)
146 2l6j_A TPR repeat-containing p 99.2 1.3E-10 4.3E-15 92.3 12.1 69 46-114 3-71 (111)
147 1elw_A TPR1-domain of HOP; HOP 99.2 5.7E-10 2E-14 88.4 15.1 101 46-154 3-103 (118)
148 2qfc_A PLCR protein; TPR, HTH, 99.2 5.6E-09 1.9E-13 98.7 24.0 172 5-178 71-258 (293)
149 3dss_A Geranylgeranyl transfer 99.2 1.2E-09 4.2E-14 106.5 19.1 122 2-127 101-239 (331)
150 2kck_A TPR repeat; tetratricop 99.2 6.7E-11 2.3E-15 93.2 8.2 98 46-151 5-105 (112)
151 3q15_A PSP28, response regulat 99.2 3.5E-10 1.2E-14 110.8 14.9 108 6-113 179-293 (378)
152 2xev_A YBGF; tetratricopeptide 99.2 5.2E-10 1.8E-14 91.3 13.6 99 49-155 4-108 (129)
153 3dra_A Protein farnesyltransfe 99.2 1.9E-10 6.4E-15 111.2 12.2 125 2-130 96-235 (306)
154 3gw4_A Uncharacterized protein 99.2 2.3E-10 7.7E-15 100.6 11.8 130 7-136 24-168 (203)
155 3ma5_A Tetratricopeptide repea 99.1 2.3E-10 7.8E-15 91.1 10.7 72 45-116 5-76 (100)
156 3rjv_A Putative SEL1 repeat pr 99.1 4.4E-10 1.5E-14 101.7 13.5 135 6-157 15-163 (212)
157 2ifu_A Gamma-SNAP; membrane fu 99.1 1.5E-10 5E-15 110.8 10.6 107 7-115 74-189 (307)
158 2qfc_A PLCR protein; TPR, HTH, 99.1 1.2E-09 4E-14 103.4 16.6 124 10-134 116-255 (293)
159 1dce_A Protein (RAB geranylger 99.1 1.9E-10 6.4E-15 120.3 12.0 124 2-129 100-240 (567)
160 2dba_A Smooth muscle cell asso 99.1 7.5E-10 2.6E-14 91.9 13.4 101 44-152 25-128 (148)
161 3q15_A PSP28, response regulat 99.1 5.1E-10 1.7E-14 109.6 14.3 131 5-136 137-282 (378)
162 1elr_A TPR2A-domain of HOP; HO 99.1 7E-10 2.4E-14 89.6 12.8 104 46-157 3-113 (131)
163 1na0_A Designed protein CTPR3; 99.1 2.2E-09 7.6E-14 85.7 15.6 104 46-157 8-112 (125)
164 3u3w_A Transcriptional activat 99.1 4.4E-10 1.5E-14 106.3 13.1 125 11-136 117-258 (293)
165 1wao_1 Serine/threonine protei 99.1 3.2E-11 1.1E-15 123.3 5.5 111 2-116 33-156 (477)
166 1zu2_A Mitochondrial import re 99.1 5.5E-11 1.9E-15 103.7 6.0 76 2-81 29-125 (158)
167 4a1s_A PINS, partner of inscut 99.1 2.6E-10 8.9E-15 111.6 11.0 132 5-136 122-284 (411)
168 2ifu_A Gamma-SNAP; membrane fu 99.1 5.1E-10 1.7E-14 107.0 12.2 125 10-136 37-176 (307)
169 3ro2_A PINS homolog, G-protein 99.1 2.5E-09 8.4E-14 99.9 16.7 104 8-112 82-214 (338)
170 3k9i_A BH0479 protein; putativ 99.1 3.9E-10 1.3E-14 91.8 9.7 83 5-91 23-105 (117)
171 3q7a_A Farnesyltransferase alp 99.1 8.8E-10 3E-14 108.2 13.1 122 2-127 81-213 (349)
172 3n71_A Histone lysine methyltr 99.1 4.2E-09 1.4E-13 108.2 17.9 113 9-121 309-438 (490)
173 2c2l_A CHIP, carboxy terminus 99.1 3.8E-09 1.3E-13 100.0 16.3 91 46-136 3-93 (281)
174 2kc7_A BFR218_protein; tetratr 99.0 1.9E-09 6.7E-14 84.3 11.6 69 50-118 3-72 (99)
175 2if4_A ATFKBP42; FKBP-like, al 99.0 1.4E-10 4.8E-15 113.1 5.6 103 10-116 231-334 (338)
176 3ma5_A Tetratricopeptide repea 99.0 1E-09 3.5E-14 87.2 9.5 87 4-94 2-90 (100)
177 3rjv_A Putative SEL1 repeat pr 99.0 1.5E-09 5.1E-14 98.2 11.8 114 6-127 47-174 (212)
178 4f3v_A ESX-1 secretion system 99.0 2.5E-09 8.5E-14 102.0 13.1 114 3-121 130-247 (282)
179 3u3w_A Transcriptional activat 99.0 8.3E-09 2.8E-13 97.5 16.6 165 6-172 72-252 (293)
180 2ooe_A Cleavage stimulation fa 99.0 3.7E-09 1.3E-13 108.4 14.4 158 2-171 265-440 (530)
181 2ooe_A Cleavage stimulation fa 99.0 7.6E-09 2.6E-13 106.0 16.5 137 4-152 316-454 (530)
182 1ihg_A Cyclophilin 40; ppiase 99.0 2.3E-09 7.9E-14 106.0 12.2 119 46-172 222-357 (370)
183 3ro3_A PINS homolog, G-protein 99.0 4.6E-09 1.6E-13 87.4 11.6 105 9-113 49-161 (164)
184 2kat_A Uncharacterized protein 99.0 2.5E-09 8.6E-14 86.3 9.3 90 2-95 12-103 (115)
185 3q7a_A Farnesyltransferase alp 99.0 5.5E-08 1.9E-12 95.4 20.4 165 2-170 47-215 (349)
186 3gw4_A Uncharacterized protein 98.9 1.4E-08 4.9E-13 88.9 12.5 114 19-136 2-128 (203)
187 3qww_A SET and MYND domain-con 98.9 1.9E-08 6.4E-13 101.7 14.1 110 13-122 302-428 (433)
188 3qwp_A SET and MYND domain-con 98.9 4.2E-08 1.4E-12 99.0 16.2 119 9-127 287-422 (429)
189 4f3v_A ESX-1 secretion system 98.8 1.2E-08 4.2E-13 97.2 11.1 133 10-155 103-240 (282)
190 1pc2_A Mitochondria fission pr 98.8 3.4E-08 1.2E-12 85.3 12.0 100 25-128 14-118 (152)
191 3bee_A Putative YFRE protein; 98.8 8.3E-08 2.9E-12 76.0 12.1 77 44-120 3-82 (93)
192 2xm6_A Protein corresponding t 98.7 3.9E-07 1.4E-11 92.2 19.0 112 6-127 36-159 (490)
193 1hz4_A MALT regulatory protein 98.7 1.5E-07 5E-12 91.2 14.7 127 9-136 53-195 (373)
194 1hz4_A MALT regulatory protein 98.7 1.9E-07 6.7E-12 90.3 15.1 127 9-136 14-156 (373)
195 2v5f_A Prolyl 4-hydroxylase su 98.7 1.5E-07 5.2E-12 75.5 11.2 80 9-88 5-87 (104)
196 1klx_A Cysteine rich protein B 98.7 1.9E-07 6.4E-12 78.8 12.2 97 15-121 31-135 (138)
197 2xm6_A Protein corresponding t 98.7 3.8E-07 1.3E-11 92.3 16.8 110 8-127 254-375 (490)
198 2v5f_A Prolyl 4-hydroxylase su 98.7 2.3E-07 8E-12 74.4 12.1 79 46-124 4-89 (104)
199 3n71_A Histone lysine methyltr 98.7 5.5E-08 1.9E-12 99.8 10.3 108 4-111 346-465 (490)
200 3e4b_A ALGK; tetratricopeptide 98.5 7.5E-07 2.6E-11 89.9 14.4 108 10-126 177-294 (452)
201 1xi4_A Clathrin heavy chain; a 98.5 9.1E-06 3.1E-10 91.4 23.7 108 10-129 1196-1328(1630)
202 1klx_A Cysteine rich protein B 98.5 8.7E-07 3E-11 74.7 10.3 109 23-151 9-125 (138)
203 3e4b_A ALGK; tetratricopeptide 98.5 1.2E-06 4E-11 88.5 13.1 111 4-127 208-330 (452)
204 4b4t_Q 26S proteasome regulato 98.4 1.1E-06 3.9E-11 86.2 11.8 130 8-138 54-198 (434)
205 3ly7_A Transcriptional activat 98.4 3.9E-06 1.3E-10 82.5 14.2 125 9-138 196-333 (372)
206 3mv2_B Coatomer subunit epsilo 98.4 1.3E-05 4.5E-10 77.1 17.4 128 6-136 97-232 (310)
207 4b4t_Q 26S proteasome regulato 98.4 1.4E-06 4.7E-11 85.7 10.8 126 10-136 5-156 (434)
208 3u64_A Protein TP_0956; tetrat 98.4 5.3E-06 1.8E-10 78.8 14.1 110 3-114 146-273 (301)
209 3bee_A Putative YFRE protein; 98.4 1.5E-06 5.2E-11 68.6 8.8 73 5-81 2-77 (93)
210 1xi4_A Clathrin heavy chain; a 98.4 1.1E-05 3.7E-10 90.7 18.4 93 15-113 1055-1166(1630)
211 1nzn_A CGI-135 protein, fissio 98.3 9.1E-06 3.1E-10 67.7 11.4 101 24-128 16-121 (126)
212 1pc2_A Mitochondria fission pr 98.2 6.4E-06 2.2E-10 71.0 9.7 84 4-89 27-113 (152)
213 3mv2_B Coatomer subunit epsilo 98.2 2.1E-05 7.1E-10 75.7 13.4 120 7-130 134-270 (310)
214 3qwp_A SET and MYND domain-con 98.0 1E-05 3.5E-10 81.5 9.1 90 4-93 324-425 (429)
215 3qww_A SET and MYND domain-con 98.0 1.3E-05 4.5E-10 80.8 9.6 79 4-82 335-422 (433)
216 3ffl_A Anaphase-promoting comp 97.9 8.3E-05 2.8E-09 64.6 11.0 115 10-125 21-165 (167)
217 1b89_A Protein (clathrin heavy 97.9 0.00032 1.1E-08 70.6 16.6 106 10-129 123-255 (449)
218 1b89_A Protein (clathrin heavy 97.8 8.1E-05 2.8E-09 75.0 11.1 100 9-131 94-193 (449)
219 3o48_A Mitochondria fission 1 97.7 0.00034 1.1E-08 58.5 11.3 84 46-129 39-126 (134)
220 1y8m_A FIS1; mitochondria, unk 97.7 0.00049 1.7E-08 58.3 11.8 82 46-127 38-123 (144)
221 3u64_A Protein TP_0956; tetrat 97.5 0.00085 2.9E-08 63.7 12.2 103 44-154 149-271 (301)
222 4e6h_A MRNA 3'-END-processing 97.4 0.0022 7.5E-08 68.1 15.2 140 5-152 374-533 (679)
223 4e6h_A MRNA 3'-END-processing 97.4 0.00091 3.1E-08 71.1 12.2 80 27-110 327-407 (679)
224 1nzn_A CGI-135 protein, fissio 97.4 0.0011 3.9E-08 55.0 10.1 82 6-89 32-116 (126)
225 3ly7_A Transcriptional activat 97.4 0.00085 2.9E-08 65.9 10.5 71 45-116 275-345 (372)
226 4h7y_A Dual specificity protei 97.4 0.0028 9.7E-08 54.1 12.3 116 3-119 7-132 (161)
227 4db8_A Armadillo-repeat protei 97.2 0.0062 2.1E-07 55.1 14.1 174 155-339 25-212 (252)
228 4hxt_A De novo protein OR329; 97.1 0.0032 1.1E-07 56.6 11.5 173 155-339 15-202 (252)
229 3o48_A Mitochondria fission 1 97.1 0.007 2.4E-07 50.5 11.6 80 8-90 39-121 (134)
230 1y8m_A FIS1; mitochondria, unk 97.0 0.0082 2.8E-07 50.8 11.5 80 6-88 36-118 (144)
231 4db6_A Armadillo repeat protei 96.9 0.0041 1.4E-07 54.8 9.8 172 153-336 23-209 (210)
232 2ff4_A Probable regulatory pro 96.8 0.014 4.9E-07 57.5 14.0 100 8-107 114-231 (388)
233 1xqr_A HSPBP1 protein; armadil 96.8 0.0062 2.1E-07 58.0 11.0 171 157-339 55-241 (296)
234 4db8_A Armadillo-repeat protei 96.8 0.059 2E-06 48.5 16.5 171 154-336 66-251 (252)
235 4hxt_A De novo protein OR329; 96.7 0.0069 2.3E-07 54.4 9.4 174 154-339 56-244 (252)
236 3ffl_A Anaphase-promoting comp 96.2 0.015 5.2E-07 50.4 8.3 83 8-91 62-165 (167)
237 2z6h_A Catenin beta-1, beta-ca 96.2 0.043 1.5E-06 57.3 13.4 176 152-338 67-255 (644)
238 1jdh_A Beta-catenin; beta-cate 96.2 0.087 3E-06 52.8 15.2 174 153-338 71-258 (529)
239 2uy1_A Cleavage stimulation fa 95.9 0.12 4E-06 52.5 14.6 116 5-122 209-361 (493)
240 3ltm_A Alpha-REP4; protein eng 95.7 0.3 1E-05 42.7 14.7 144 154-339 62-206 (211)
241 2jdq_A Importin alpha-1 subuni 95.5 0.23 8E-06 48.4 14.8 174 155-339 78-266 (450)
242 4db6_A Armadillo repeat protei 95.3 0.022 7.7E-07 49.9 5.9 117 212-339 52-170 (210)
243 3kae_A CDC27, possible protein 95.1 0.3 1E-05 42.6 11.7 96 14-118 38-151 (242)
244 4b4t_R RPN7, 26S proteasome re 94.9 0.22 7.4E-06 49.6 12.3 101 11-112 133-239 (429)
245 3ltj_A Alpharep-4; protein eng 94.8 0.49 1.7E-05 40.9 13.1 141 153-335 25-166 (201)
246 4g26_A Pentatricopeptide repea 94.8 1.5 5.2E-05 44.3 18.5 148 12-172 29-191 (501)
247 2uy1_A Cleavage stimulation fa 94.7 0.55 1.9E-05 47.5 15.0 113 9-130 286-399 (493)
248 4b8j_A Importin subunit alpha- 94.7 0.27 9.3E-06 49.5 12.7 180 149-339 125-318 (528)
249 2jdq_A Importin alpha-1 subuni 94.6 0.058 2E-06 52.8 7.3 175 154-339 32-224 (450)
250 1xm9_A Plakophilin 1; armadill 94.6 0.32 1.1E-05 48.5 12.8 175 155-335 15-219 (457)
251 2z6g_A B-catenin; FULL-length, 94.6 0.038 1.3E-06 59.4 6.3 118 211-339 147-266 (780)
252 3l6x_A Catenin delta-1; cateni 94.3 0.084 2.9E-06 54.9 7.9 154 177-339 42-224 (584)
253 3ltj_A Alpharep-4; protein eng 94.3 0.87 3E-05 39.3 13.5 141 153-335 56-197 (201)
254 4g26_A Pentatricopeptide repea 94.3 0.71 2.4E-05 46.8 14.6 91 13-107 109-201 (501)
255 4gns_B Protein CSD3, chitin bi 94.2 0.12 4.2E-06 55.2 9.0 59 49-107 339-397 (754)
256 3ltm_A Alpha-REP4; protein eng 94.1 0.64 2.2E-05 40.5 12.3 141 153-335 30-171 (211)
257 3txn_A 26S proteasome regulato 94.0 0.44 1.5E-05 47.0 12.0 97 14-110 104-210 (394)
258 4gns_B Protein CSD3, chitin bi 94.0 0.15 5.2E-06 54.5 9.3 62 8-73 336-397 (754)
259 1ya0_A SMG-7 transcript varian 93.8 0.29 1E-05 49.8 10.7 79 49-127 154-232 (497)
260 1jdh_A Beta-catenin; beta-cate 93.8 0.59 2E-05 46.6 12.9 175 153-337 28-216 (529)
261 3ul1_B Importin subunit alpha- 93.8 1.3 4.5E-05 44.6 15.6 181 149-339 108-306 (510)
262 4b8j_A Importin subunit alpha- 93.7 0.095 3.3E-06 53.0 6.9 175 154-339 86-276 (528)
263 1zbp_A Hypothetical protein VP 93.7 0.36 1.2E-05 45.0 10.0 70 55-124 5-74 (273)
264 2z6g_A B-catenin; FULL-length, 93.7 1.2 4.2E-05 47.6 15.7 153 153-314 204-369 (780)
265 1wa5_B Importin alpha subunit; 93.6 0.34 1.2E-05 48.9 10.8 180 149-339 138-331 (530)
266 1wa5_B Importin alpha subunit; 93.5 0.067 2.3E-06 54.2 5.3 174 154-339 99-289 (530)
267 3tt9_A Plakophilin-2; cell adh 93.3 4.6 0.00016 36.6 16.8 165 157-335 25-228 (233)
268 4h7y_A Dual specificity protei 93.3 0.57 2E-05 39.9 9.7 114 46-168 12-140 (161)
269 4fhn_B Nucleoporin NUP120; pro 93.2 0.87 3E-05 51.0 14.0 115 11-129 844-982 (1139)
270 2z6h_A Catenin beta-1, beta-ca 93.2 0.45 1.5E-05 49.5 11.1 175 154-338 26-214 (644)
271 2ff4_A Probable regulatory pro 93.1 1.4 4.9E-05 43.0 13.9 98 54-151 122-241 (388)
272 3nmw_A APC variant protein; AR 93.0 0.29 9.9E-06 47.5 8.8 117 213-336 125-247 (354)
273 1ya0_A SMG-7 transcript varian 92.8 0.52 1.8E-05 48.0 10.6 80 11-94 154-233 (497)
274 3now_A UNC-45 protein, SD10334 92.5 0.45 1.5E-05 51.3 10.1 184 145-339 499-697 (810)
275 3tpo_A Importin subunit alpha- 92.0 2.8 9.6E-05 42.3 15.0 181 149-339 127-325 (529)
276 3tpo_A Importin subunit alpha- 91.9 0.45 1.5E-05 48.3 8.9 175 153-339 262-452 (529)
277 1te4_A Conserved protein MTH18 91.4 0.61 2.1E-05 37.7 7.5 87 216-333 44-130 (131)
278 1oyz_A Hypothetical protein YI 91.2 8.3 0.00029 34.8 16.3 27 216-242 130-156 (280)
279 1xm9_A Plakophilin 1; armadill 91.0 0.34 1.2E-05 48.4 6.8 118 211-339 41-174 (457)
280 3mkq_A Coatomer beta'-subunit; 90.8 2.5 8.5E-05 44.2 13.5 46 57-107 662-707 (814)
281 3ul1_B Importin subunit alpha- 90.0 0.55 1.9E-05 47.5 7.4 175 153-339 243-433 (510)
282 1zbp_A Hypothetical protein VP 89.8 4.1 0.00014 37.8 12.4 63 17-83 5-67 (273)
283 1xqr_A HSPBP1 protein; armadil 89.6 1.8 6E-05 40.8 10.0 143 153-303 93-250 (296)
284 4b4t_P 26S proteasome regulato 89.4 6 0.0002 39.3 14.3 103 8-110 136-247 (445)
285 3opb_A SWI5-dependent HO expre 89.3 1.1 3.9E-05 47.7 9.2 122 214-339 606-731 (778)
286 3nmz_A APC variant protein; pr 89.1 8.8 0.0003 38.3 15.4 169 161-336 167-363 (458)
287 2vgl_B AP-2 complex subunit be 88.3 2.4 8.2E-05 43.6 10.8 133 185-338 51-191 (591)
288 3txn_A 26S proteasome regulato 88.3 8.2 0.00028 37.8 14.1 101 10-110 20-168 (394)
289 3mkq_B Coatomer subunit alpha; 87.5 12 0.00043 32.3 13.3 53 47-107 8-60 (177)
290 3tt9_A Plakophilin-2; cell adh 87.4 0.45 1.5E-05 43.4 4.1 118 212-339 50-183 (233)
291 4ady_A RPN2, 26S proteasome re 87.0 14 0.00046 40.5 16.0 246 9-292 413-676 (963)
292 3nmw_A APC variant protein; AR 86.6 5.9 0.0002 38.1 11.8 173 157-339 99-295 (354)
293 1oyz_A Hypothetical protein YI 86.4 18 0.00062 32.4 22.0 177 47-242 37-220 (280)
294 3mkq_A Coatomer beta'-subunit; 86.3 4.5 0.00015 42.2 11.7 81 16-105 659-747 (814)
295 4b4t_S RPN3, 26S proteasome re 85.8 1.7 5.9E-05 44.2 7.7 72 44-117 228-306 (523)
296 3spa_A Mtrpol, DNA-directed RN 82.1 17 0.00059 40.2 14.0 94 11-109 129-229 (1134)
297 3nmz_A APC variant protein; pr 81.5 6.5 0.00022 39.3 9.9 178 153-339 254-453 (458)
298 2vkj_A TM1634; membrane protei 80.2 6.1 0.00021 30.2 6.9 52 7-59 51-102 (106)
299 3mkq_B Coatomer subunit alpha; 79.4 13 0.00043 32.3 9.8 50 15-73 11-60 (177)
300 3kae_A CDC27, possible protein 78.5 16 0.00054 31.8 9.8 76 7-82 60-149 (242)
301 3l6x_A Catenin delta-1; cateni 76.4 14 0.00047 38.2 10.7 178 155-337 61-271 (584)
302 2v6y_A AAA family ATPase, P60 76.3 22 0.00074 26.6 9.3 15 93-107 23-37 (83)
303 2w2u_A Hypothetical P60 katani 75.3 23 0.0008 26.5 9.6 15 93-107 31-45 (83)
304 4b4t_P 26S proteasome regulato 75.3 25 0.00087 34.7 12.1 63 46-108 136-204 (445)
305 2cpt_A SKD1 protein, vacuolar 74.9 25 0.00086 28.1 9.8 17 93-109 30-46 (117)
306 4b4t_R RPN7, 26S proteasome re 74.8 11 0.00036 37.2 9.1 65 46-110 130-197 (429)
307 2vgl_A Adaptor protein complex 74.5 18 0.0006 37.5 11.1 160 153-339 49-219 (621)
308 2w2u_A Hypothetical P60 katani 74.0 4.8 0.00017 30.3 4.9 30 9-38 19-48 (83)
309 1te4_A Conserved protein MTH18 73.9 1.9 6.4E-05 34.7 2.8 90 214-335 12-101 (131)
310 3ax2_A Mitochondrial import re 72.0 6.4 0.00022 29.0 5.0 29 13-42 21-49 (73)
311 2v6y_A AAA family ATPase, P60 71.9 5.8 0.0002 29.8 4.9 31 8-38 10-40 (83)
312 2crb_A Nuclear receptor bindin 70.4 6.5 0.00022 30.3 4.8 28 81-108 15-42 (97)
313 4ady_A RPN2, 26S proteasome re 69.7 68 0.0023 35.1 14.4 51 59-111 386-441 (963)
314 1qsa_A Protein (soluble lytic 68.6 15 0.00053 38.1 9.0 54 56-109 294-347 (618)
315 1wfd_A Hypothetical protein 15 68.2 37 0.0013 25.8 9.3 16 93-108 27-42 (93)
316 4a5x_A MITD1, MIT domain-conta 68.1 7.1 0.00024 29.6 4.7 30 9-38 16-45 (86)
317 4fhn_B Nucleoporin NUP120; pro 68.0 16 0.00054 40.8 9.5 91 16-114 819-932 (1139)
318 3b2a_A TON_1937, putative unch 67.7 74 0.0025 29.0 19.0 204 162-377 11-240 (265)
319 2cug_A Mkiaa0962 protein; DNAJ 66.8 15 0.00052 27.5 6.4 57 144-205 18-79 (88)
320 2v6x_A Vacuolar protein sortin 66.4 8.7 0.0003 28.8 4.9 31 8-38 12-42 (85)
321 3mkr_B Coatomer subunit alpha; 66.0 33 0.0011 32.5 9.8 107 6-113 99-230 (320)
322 1wfd_A Hypothetical protein 15 65.7 8.9 0.00031 29.4 4.9 29 9-37 15-43 (93)
323 3lpz_A GET4 (YOR164C homolog); 64.0 49 0.0017 31.5 10.8 96 9-104 35-159 (336)
324 3mv2_A Coatomer subunit alpha; 63.8 30 0.001 32.8 9.1 106 8-114 113-240 (325)
325 4gq2_M Nucleoporin NUP120; bet 63.4 32 0.0011 37.5 10.7 94 15-116 816-933 (950)
326 2ctp_A DNAJ homolog subfamily 63.4 16 0.00053 26.6 5.8 56 144-204 8-68 (78)
327 1w63_A Adapter-related protein 63.1 47 0.0016 34.1 11.4 119 156-297 48-177 (618)
328 3ax2_A Mitochondrial import re 62.1 18 0.0006 26.6 5.6 37 85-121 21-57 (73)
329 3t5v_B Nuclear mRNA export pro 61.0 18 0.0006 36.2 7.4 92 24-115 141-255 (455)
330 2cpt_A SKD1 protein, vacuolar 60.7 10 0.00035 30.5 4.6 14 26-39 16-29 (117)
331 1qsa_A Protein (soluble lytic 60.3 32 0.0011 35.7 9.4 121 15-136 220-340 (618)
332 2crb_A Nuclear receptor bindin 60.1 15 0.00051 28.3 5.0 28 47-74 15-42 (97)
333 2yua_A Williams-beuren syndrom 59.7 19 0.00064 27.7 5.9 56 144-204 18-79 (99)
334 1wy6_A Hypothetical protein ST 58.7 78 0.0027 26.5 9.5 61 50-110 93-154 (172)
335 2ctr_A DNAJ homolog subfamily 58.6 23 0.00078 26.5 6.1 52 144-200 8-64 (88)
336 2dn9_A DNAJ homolog subfamily 57.9 22 0.00077 25.8 5.8 52 144-200 8-65 (79)
337 2dl1_A Spartin; SPG20, MIT, st 57.1 31 0.001 27.7 6.7 62 62-131 18-83 (116)
338 4a5x_A MITD1, MIT domain-conta 56.9 57 0.0019 24.4 8.0 24 86-109 21-44 (86)
339 1hdj_A Human HSP40, HDJ-1; mol 56.2 19 0.00066 26.0 5.2 55 145-204 5-64 (77)
340 1wjz_A 1700030A21RIK protein; 54.8 13 0.00043 28.2 4.0 31 144-174 17-48 (94)
341 1om2_A Protein (mitochondrial 54.1 12 0.0004 29.0 3.7 29 13-42 24-52 (95)
342 2ctq_A DNAJ homolog subfamily 54.1 27 0.00094 27.4 6.1 60 144-208 21-86 (112)
343 4gq2_M Nucleoporin NUP120; bet 54.0 48 0.0016 36.1 10.0 85 10-94 841-949 (950)
344 2dmx_A DNAJ homolog subfamily 53.1 36 0.0012 25.5 6.5 32 144-175 10-42 (92)
345 4b4t_S RPN3, 26S proteasome re 53.1 18 0.00062 36.7 5.9 74 8-81 230-304 (523)
346 2ej7_A HCG3 gene; HCG3 protein 52.4 26 0.0009 25.6 5.4 56 144-204 10-72 (82)
347 3t5x_A PCI domain-containing p 51.9 29 0.001 30.4 6.5 35 46-80 13-47 (203)
348 2o37_A Protein SIS1; HSP40, J- 51.2 38 0.0013 25.4 6.3 57 144-205 9-68 (92)
349 2wpv_A GET4, UPF0363 protein Y 50.1 1.7E+02 0.0057 27.5 12.7 27 79-105 132-158 (312)
350 2qsa_A DNAJ homolog DNJ-2; J-d 49.4 35 0.0012 26.5 6.0 60 144-208 16-85 (109)
351 2lgw_A DNAJ homolog subfamily 49.1 36 0.0012 26.1 5.9 52 144-200 3-61 (99)
352 2cfu_A SDSA1; SDS-hydrolase, l 48.5 29 0.001 36.2 6.9 53 80-132 448-500 (658)
353 2och_A Hypothetical protein DN 48.1 32 0.0011 24.6 5.1 56 144-204 9-67 (73)
354 3t5x_A PCI domain-containing p 47.2 25 0.00086 30.8 5.3 34 81-114 14-47 (203)
355 2br9_A 14-3-3E, 14-3-3 protein 46.5 37 0.0012 30.7 6.3 48 27-74 148-200 (234)
356 2ctw_A DNAJ homolog subfamily 45.9 38 0.0013 26.4 5.7 58 144-206 18-81 (109)
357 1w63_A Adapter-related protein 43.5 1.2E+02 0.0041 30.9 10.7 134 183-339 313-454 (618)
358 3apq_A DNAJ homolog subfamily 43.0 51 0.0017 28.3 6.7 52 144-200 3-60 (210)
359 1om2_A Protein (mitochondrial 42.9 26 0.00089 27.1 4.0 34 85-118 24-57 (95)
360 4fdd_A Transportin-1; heat rep 42.5 3.2E+02 0.011 28.6 17.6 117 216-339 130-247 (852)
361 2o8p_A 14-3-3 domain containin 41.8 89 0.003 28.0 8.0 56 20-75 136-196 (227)
362 2rpa_A Katanin P60 ATPase-cont 41.7 31 0.0011 25.6 4.2 27 12-38 15-41 (78)
363 2cfu_A SDSA1; SDS-hydrolase, l 40.4 61 0.0021 33.8 7.8 51 48-98 450-500 (658)
364 3uzd_A 14-3-3 protein gamma; s 40.1 52 0.0018 29.9 6.3 48 26-73 148-200 (248)
365 1o9d_A 14-3-3-like protein C; 40.1 51 0.0018 30.2 6.3 48 27-74 153-205 (260)
366 3myv_A SUSD superfamily protei 38.5 70 0.0024 31.4 7.6 26 83-108 192-217 (454)
367 3ubw_A 14-3-3E, 14-3-3 protein 38.3 58 0.002 29.9 6.3 47 27-73 174-225 (261)
368 2npm_A 14-3-3 domain containin 38.2 71 0.0024 29.3 6.9 48 27-74 174-225 (260)
369 1wy6_A Hypothetical protein ST 37.2 1.3E+02 0.0045 25.2 7.6 56 18-77 100-155 (172)
370 3lew_A SUSD-like carbohydrate 36.1 78 0.0027 31.5 7.6 29 82-110 204-232 (495)
371 3kez_A Putative sugar binding 36.0 77 0.0026 31.2 7.5 27 83-109 198-224 (461)
372 2ijq_A Hypothetical protein; s 35.8 1.7E+02 0.0057 24.7 8.4 59 51-109 36-103 (161)
373 3mcx_A SUSD superfamily protei 35.7 79 0.0027 31.2 7.5 28 82-109 203-230 (477)
374 2guz_A Mitochondrial import in 35.2 97 0.0033 21.9 6.0 34 143-176 14-49 (71)
375 2ca5_A MXIH; transport protein 35.1 1.4E+02 0.0048 22.3 7.2 28 96-123 25-52 (85)
376 1faf_A Large T antigen; J doma 34.6 1.2E+02 0.004 22.1 6.5 34 143-176 11-47 (79)
377 3iqu_A 14-3-3 protein sigma; s 33.1 80 0.0028 28.5 6.3 49 26-74 150-203 (236)
378 3efz_A 14-3-3 protein; 14-3-3, 33.0 64 0.0022 29.7 5.7 16 94-109 210-225 (268)
379 3ub0_A Non-structural protein 32.8 2.4E+02 0.0082 24.3 10.1 15 97-111 19-33 (199)
380 3b2a_A TON_1937, putative unch 32.8 2.9E+02 0.0098 25.2 13.2 105 141-251 72-187 (265)
381 2ys8_A RAB-related GTP-binding 32.6 74 0.0025 23.7 5.2 49 143-193 27-80 (90)
382 3spa_A Mtrpol, DNA-directed RN 32.2 1.7E+02 0.0058 32.5 9.6 70 45-114 125-200 (1134)
383 1iur_A KIAA0730 protein; DNAJ 32.0 1E+02 0.0034 23.1 5.9 33 143-175 16-49 (88)
384 3t5v_B Nuclear mRNA export pro 31.1 80 0.0028 31.3 6.6 66 15-80 182-254 (455)
385 4fdd_A Transportin-1; heat rep 30.9 3.4E+02 0.012 28.4 12.0 176 153-339 185-391 (852)
386 2ijq_A Hypothetical protein; s 30.8 2.4E+02 0.0082 23.7 9.5 66 10-76 33-104 (161)
387 3myv_A SUSD superfamily protei 30.5 1.1E+02 0.0038 29.9 7.6 21 116-136 191-211 (454)
388 3lew_A SUSD-like carbohydrate 29.8 1.1E+02 0.0039 30.3 7.5 21 116-136 204-224 (495)
389 2dl1_A Spartin; SPG20, MIT, st 29.7 64 0.0022 25.8 4.4 45 23-79 17-61 (116)
390 3kez_A Putative sugar binding 28.5 1.2E+02 0.004 29.8 7.3 21 116-136 197-217 (461)
391 2rpa_A Katanin P60 ATPase-cont 27.3 52 0.0018 24.4 3.3 25 51-75 16-40 (78)
392 2l6l_A DNAJ homolog subfamily 25.8 1.6E+02 0.0055 24.1 6.7 32 144-175 11-43 (155)
393 3qnk_A Putative lipoprotein; a 25.8 1.4E+02 0.0047 29.8 7.3 30 81-110 182-211 (517)
394 3hdx_A SUSD homolog, SUSD supe 25.6 1.5E+02 0.0052 29.1 7.6 31 46-76 196-226 (478)
395 3mcx_A SUSD superfamily protei 25.4 1.3E+02 0.0045 29.5 7.0 21 116-136 203-223 (477)
396 3snx_A SUSD homolog, putative 24.0 1.4E+02 0.0047 29.4 6.8 28 82-109 192-219 (460)
397 2vgl_A Adaptor protein complex 23.4 4.6E+02 0.016 26.6 11.0 85 213-317 367-453 (621)
398 3txs_A Terminase DNA packaging 22.8 37 0.0013 25.9 1.7 33 306-339 43-75 (94)
399 2pf4_E Small T antigen; PP2A, 21.9 39 0.0013 29.0 2.0 49 143-193 11-63 (174)
400 2yhe_A SEC-alkyl sulfatase; hy 26.3 21 0.00071 37.5 0.0 49 83-131 463-511 (668)
401 2p6v_A Transcription initiatio 20.4 1.2E+02 0.0041 24.0 4.3 60 258-327 14-83 (114)
402 3jq1_A SUSD superfamily protei 20.0 1.3E+02 0.0045 29.7 5.8 27 82-108 181-207 (481)
No 1
>3now_A UNC-45 protein, SD10334P; armadillo repeat, HSP90, myosin, tetra-tricopeptide repeat, binding protein required for myosin function; 2.99A {Drosophila melanogaster}
Probab=100.00 E-value=8.2e-34 Score=305.47 Aligned_cols=170 Identities=52% Similarity=0.834 Sum_probs=159.0
Q ss_pred HHHHHhcHHHHHHHHcCCChhHHHHHHHhhhhccccCCCCCCCCCCCCCchHHHHHHHHhhhcCCCCCchhHHhHHhhhh
Q psy4703 209 TSIIKQGVDILKRLYMSKNENIRVRALVGLCKLGSMGGSDASIRPFADGSTRKLAEACRRFLVNPARDPDIRRWAAEGLA 288 (401)
Q Consensus 209 ~~i~~~gv~~Lk~l~~s~~d~i~~ralvgLckl~~~gg~d~~~~~~~~~s~~~l~~~~~~~l~~~~~~~~~~~~~~egla 288 (401)
..+.+.|+++|..+++++++.++.+|+++|||+++++++|.+.++|.+|++..|++.|++||.+++.|++.++||+|||+
T Consensus 325 ~~I~~~gv~~L~~Ll~s~~~~vr~~Al~~L~kl~s~~~~d~~~~~~~~g~i~~Lv~~l~~lL~~~~~d~~v~~~AveaLa 404 (810)
T 3now_A 325 KALCEQGVDILKRLYHSKNDGIRVRALVGLCKLGSYGGQDAAIRPFGDGAALKLAEACRRFLIKPGKDKDIRRWAADGLA 404 (810)
T ss_dssp HTTHHHHHHHHHHHTTCSCHHHHHHHHHHHHHHHTTTTTTTSCCSSTTTHHHHHHHHHHHHHHCSSCCSSHHHHHHHHHH
T ss_pred HHHHHcCcHHHHHHHcCCCHHHHHHHHHHHHHhccccccCccccchhhccHHHHHHHHHHHhcCCCCCHHHHHHHHHHHH
Confidence 44677899999999999999999999999999998888889899999999999999999999998888999999999999
Q ss_pred hccCCHHHHHhhcCCHHHHHHHHHHHhcCCCCcchhhhhhhHHhhcccCCc-----HHHHHHHhhHhhhhhhhhccCCCc
Q psy4703 289 YLTLDAEVKEALIEDKPALAALVDVASSVKYKNVWNGTQSDALKDVDKAFD-----EFMEEVAKLEKEEAEMLETLYQDE 363 (401)
Q Consensus 289 y~~~~~~vke~~~~d~~~l~~l~~~~~~~~~~~~~~~~~~~~~~n~~~~~~-----~~~~~l~~~~~~~~~~~~~~~~~~ 363 (401)
|+|++++||++++.|..++..||+++++. ++++.||++ +||.|||+.+| ++|.+|++|+++|+ | ++||
T Consensus 405 yLS~~~~vk~~lv~d~g~Ip~LV~LL~s~-d~~i~~~al-~~L~NLt~~~d~q~~~~~l~~la~~s~~~v--~---~~~~ 477 (810)
T 3now_A 405 YLTLDAECKEKLIEDKASIHALMDLARGG-NQSCLYGVV-TTFVNLCNAYEKQEMLPEMIELAKFAKQHI--P---EEHE 477 (810)
T ss_dssp HHTTSHHHHHHHHHCHHHHHHHHHHHHTT-CGGGHHHHH-HHHHHHTTCSCCCCCCCSCGGGTTTTCCSC--C---CSSC
T ss_pred HHhCCcHHHHHHHHccchHHHHHHHhCCC-ChHHHHHHH-HHHHHHcCCchhhhhhHHHHHHHHHhhccC--c---cccc
Confidence 99999999999999999999999999987 899999999 99999999886 67899999999998 8 8899
Q ss_pred cchHHHHHH-HHHHHhcccccee
Q psy4703 364 KELADFYSL-LSTLVNGSSSVGM 385 (401)
Q Consensus 364 ~~~~~~v~~-~~~~~~~~~~~~~ 385 (401)
+|+++||.+ |+.++++|++-.+
T Consensus 478 ld~~~~v~~r~~~VveaGaVp~L 500 (810)
T 3now_A 478 LDDVDFINKRITVLANEGITTAL 500 (810)
T ss_dssp HHHHHHHHHHHHHHHHTTHHHHH
T ss_pred cccHHHHHHHHHHHHHCcCHHHH
Confidence 999999999 9999999987544
No 2
>3opb_A SWI5-dependent HO expression protein 4; heat and arm fold, myosin folding and function, myosin bindi protein, protein binding; 2.90A {Saccharomyces cerevisiae}
Probab=99.96 E-value=2.4e-28 Score=259.23 Aligned_cols=233 Identities=15% Similarity=0.138 Sum_probs=161.0
Q ss_pred HHHHHHHHHHH-Hhhc--CCCChhHHHHHHHHHHHhhhc--chhhHHHhhhhHHHHHHHHhhccCchhHHhhHHHHH---
Q psy4703 137 QLQNKVHNMFK-YVFD--TSAPMDKRVTAVNNLVVLARE--MSGAEMLLKSGVAKQINTLLKCETNEEIYLGEEDFI--- 208 (401)
Q Consensus 137 ~~~~~~~~~~~-~~~~--~~~~~~~~~~a~~~L~~l~~~--~~gae~~~~e~~v~~L~~ll~~~~~~e~~lA~e~fi--- 208 (401)
.+..++.++++ .+.+ .....+.......-+..+-.- +..++.+..++-+..+.+.+...+++++..+.=+.+
T Consensus 204 ~~~~~~~~~~~~l~~e~~~~~~~~~~~~~~~~l~~lfPi~p~~~s~lfl~e~~~~~l~~~~~~~~~~~~~~a~L~lLsaA 283 (778)
T 3opb_A 204 DFDKAVVDFMSSLIVEAEIDVGNDPLSIIVKTLSELYPSLTTLCSEIFLTKGLSKLFKKRVFEEQDLQFTKELLRLLSSA 283 (778)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCSSCHHHHHHHHHHHHTTTTHHHHHHHHSTTTHHHHHHHHHHSSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhccCCCCccHHHHHHHHHHHhcCCHHHHHHHHccccHHHHHHHHHhcccchHHHHHHHHHHHHH
Confidence 45566777777 3333 222334444444444433332 333344434455666666665234555655543333
Q ss_pred -------HHHHHhcHHHHHHHHcCCChhHHHHHHHhhhhccccCCCCCCCCCCCCCchHHHHHHHHhhhcCCCCCchhHH
Q psy4703 209 -------TSIIKQGVDILKRLYMSKNENIRVRALVGLCKLGSMGGSDASIRPFADGSTRKLAEACRRFLVNPARDPDIRR 281 (401)
Q Consensus 209 -------~~i~~~gv~~Lk~l~~s~~d~i~~ralvgLckl~~~gg~d~~~~~~~~~s~~~l~~~~~~~l~~~~~~~~~~~ 281 (401)
..|.+++++||.+++++ +.++++|+|+|||+++.++. ..+++.+|++.|++||.++.. +.++
T Consensus 284 Ci~~~cR~~I~~~~~~~L~~~l~~--~~ir~lAavvL~KL~~~~~~-------~~~si~~La~~~~~~L~~~~~--~~~~ 352 (778)
T 3opb_A 284 CIDETMRTYITENYLQLLERSLNV--EDVQIYSALVLVKTWSFTKL-------TCINLKQLSEIFINAISRRIV--PKVE 352 (778)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHTTS--GGGHHHHHHHHHHHTGGGTC-------TTCCHHHHHHHHHHHTTTCCH--HHHH
T ss_pred hCCcHHHHHHHHhHHHHHHHHhcc--HHHHHHHHHHHHHHhcCCCC-------CcCcHHHHHHHHHHHHhcCCc--cHHH
Confidence 56789999999999965 68999999999999986542 357889999999999997643 4599
Q ss_pred hHHhhhhhccCCHHHHHhhcCCHHHHHHHHHHHhcCCCCcchhhhhhhHHhhcccCCc------HHHHHHHhhHhhhhhh
Q psy4703 282 WAAEGLAYLTLDAEVKEALIEDKPALAALVDVASSVKYKNVWNGTQSDALKDVDKAFD------EFMEEVAKLEKEEAEM 355 (401)
Q Consensus 282 ~~~eglay~~~~~~vke~~~~d~~~l~~l~~~~~~~~~~~~~~~~~~~~~~n~~~~~~------~~~~~l~~~~~~~~~~ 355 (401)
||||||||+|++|+|||.|++|+.+|++||+++++..++++.||++ +||+|||+|+| ++|.+||+||++|+
T Consensus 353 ~AvEgLaYLSl~~~VKe~L~~d~~~L~~Lv~llk~~~d~s~~Ygal-~IL~NLt~~~~~~~~e~~~l~~Lk~~A~~~~-- 429 (778)
T 3opb_A 353 MSVEALAYLSLKASVKIMIRSNESFTEILLTMIKSQKMTHCLYGLL-VIMANLSTLPEEXXXXXXXXXXXXXXXXXXX-- 429 (778)
T ss_dssp HHHHHHHHHTTSSHHHHHHHHCHHHHHHHHHHHTTTCCTTHHHHHH-HHHHHTTCCCCCCCCCCC---------------
T ss_pred HHHHHHHHHhCCHHHHHHHHhCHHHHHHHHHHHhCCCCchHHHHHH-HHHHHhcCCCcccchhhhhhhhhhhhccccC--
Confidence 9999999999999999999999999999999999744899999999 99999999999 69999999999998
Q ss_pred hhccCCCc----cchHHHHHH--HHHHHhccccceeh
Q psy4703 356 LETLYQDE----KELADFYSL--LSTLVNGSSSVGMR 386 (401)
Q Consensus 356 ~~~~~~~~----~~~~~~v~~--~~~~~~~~~~~~~~ 386 (401)
| +.|| ++++++|.. |+.|+++|++-.+.
T Consensus 430 p---~~~~~d~~~~~~~~v~~~~~~~l~eaGvIp~Lv 463 (778)
T 3opb_A 430 P---AADKVGAEKAAKEDILLFNEKYILRTELISFLK 463 (778)
T ss_dssp --------CCTHHHHHHHHHHHHHHHTTTTTHHHHHH
T ss_pred c---ccCcccccccchHHHHHHHHHHHHHCcCHHHHH
Confidence 7 5555 666777766 99999999987664
No 3
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=99.89 E-value=6e-22 Score=166.51 Aligned_cols=120 Identities=25% Similarity=0.362 Sum_probs=115.1
Q ss_pred ccCChhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcCCCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH
Q psy4703 2 IDNNMNDYNKLKESGNSAFKQGDYETALDFYTKALKVTAEESHERATCLKNRAAVYLKQNQNDKVIEDCSKSLEIVPDDP 81 (401)
Q Consensus 2 i~~~p~~a~~l~~~Gn~~~~~g~y~eAi~~y~~Al~l~~p~~~~~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~ldP~~~ 81 (401)
...+|+.++.++++|+.+++.|+|++|+.+|+++++++ |+ ++.+|+++|.||+++|++++|+.+|+++|+++|+++
T Consensus 6 a~inP~~a~~~~~~G~~~~~~g~~~~A~~~~~~al~~~-p~---~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~ 81 (126)
T 4gco_A 6 AYINPELAQEEKNKGNEYFKKGDYPTAMRHYNEAVKRD-PE---NAILYSNRAACLTKLMEFQRALDDCDTCIRLDSKFI 81 (126)
T ss_dssp -CCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TT---CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-CC---CHHHHHHHhhHHHhhccHHHHHHHHHHHHHhhhhhh
Confidence 46799999999999999999999999999999999999 76 899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCccHHHHHHHHH
Q psy4703 82 KALFRRCQAYEAIGKFEEAYTDAKHIHRVEPTNKAIQPVLSRLF 125 (401)
Q Consensus 82 kA~~~~a~a~~~lg~~eeA~~~~~kal~l~P~~~~~~~~L~~l~ 125 (401)
.+|+++|.+|..+|+|++|+.+|+++++++|+++.++..++++.
T Consensus 82 ~a~~~lg~~~~~~~~~~~A~~~~~~al~l~P~~~~a~~~l~~~l 125 (126)
T 4gco_A 82 KGYIRKAACLVAMREWSKAQRAYEDALQVDPSNEEAREGVRNCL 125 (126)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHCcCCHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999887763
No 4
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=99.81 E-value=1.4e-19 Score=156.86 Aligned_cols=129 Identities=26% Similarity=0.334 Sum_probs=115.1
Q ss_pred ChhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcC-------CC-------CcchHHHHHHHHHHHHHcCCHHHHHHHH
Q psy4703 5 NMNDYNKLKESGNSAFKQGDYETALDFYTKALKVTA-------EE-------SHERATCLKNRAAVYLKQNQNDKVIEDC 70 (401)
Q Consensus 5 ~p~~a~~l~~~Gn~~~~~g~y~eAi~~y~~Al~l~~-------p~-------~~~~~~~~~n~a~~y~klg~y~~Ai~~~ 70 (401)
..+.+..++..|+.+++.|+|++|+.+|++++.+.+ |. .+....+|+|+|.||+++|+|++|+.+|
T Consensus 7 ~~~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~ 86 (162)
T 3rkv_A 7 KLKSVEALRQKGNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLNIGDLHEAEETS 86 (162)
T ss_dssp -CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHHHTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHH
Confidence 346788999999999999999999999999999910 11 2448899999999999999999999999
Q ss_pred HHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCc-cHHHHHHHHHHHHHHHHH
Q psy4703 71 SKSLEIVPDDPKALFRRCQAYEAIGKFEEAYTDAKHIHRVEPTNK-AIQPVLSRLFAIVTKRMQ 133 (401)
Q Consensus 71 ~kAL~ldP~~~kA~~~~a~a~~~lg~~eeA~~~~~kal~l~P~~~-~~~~~L~~l~~~~~~~~~ 133 (401)
+++|+++|+++++|+++|.+|..+|+|++|+.+|+++++++|+++ .+...+..+...+++..+
T Consensus 87 ~~al~~~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~~l~~~~~~~~~~~~ 150 (162)
T 3rkv_A 87 SEVLKREETNEKALFRRAKARIAAWKLDEAEEDLKLLLRNHPAAASVVAREMKIVTERRAEKKA 150 (162)
T ss_dssp HHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHhcCCcchHHHHHHHHHHHHHhcHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999998 778888888777666543
No 5
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=99.80 E-value=4.6e-19 Score=155.20 Aligned_cols=125 Identities=18% Similarity=0.253 Sum_probs=114.4
Q ss_pred hhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcCCCC---------cchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q psy4703 6 MNDYNKLKESGNSAFKQGDYETALDFYTKALKVTAEES---------HERATCLKNRAAVYLKQNQNDKVIEDCSKSLEI 76 (401)
Q Consensus 6 p~~a~~l~~~Gn~~~~~g~y~eAi~~y~~Al~l~~p~~---------~~~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~l 76 (401)
...+..+++.|+.+++.|+|++|+.+|++||+++ |+. +.++.+|.|+|.|+.++|+|++|+.+|++||++
T Consensus 8 ~~~a~~~~~~G~~l~~~g~~eeAi~~Y~kAL~l~-p~~~~~~a~~~~~~~a~a~~n~g~al~~Lgr~~eAl~~~~kAL~l 86 (159)
T 2hr2_A 8 VVGAYLALSDAQRQLVAGEYDEAAANCRRAMEIS-HTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHY 86 (159)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH-TTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhC-CCCcchhhhhhccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHHh
Confidence 3467889999999999999999999999999999 762 124559999999999999999999999999999
Q ss_pred -------CCCCHHHH----HHHHHHHHHcCCHHHHHHHHHHHHhhCCCCccHHHHHHHHHHHHHHH
Q psy4703 77 -------VPDDPKAL----FRRCQAYEAIGKFEEAYTDAKHIHRVEPTNKAIQPVLSRLFAIVTKR 131 (401)
Q Consensus 77 -------dP~~~kA~----~~~a~a~~~lg~~eeA~~~~~kal~l~P~~~~~~~~L~~l~~~~~~~ 131 (401)
+|+++++| +++|.++..+|+|++|+.+|+++++++|++..+...+..+...+.+.
T Consensus 87 ~n~~~e~~pd~~~A~~~~~~~rG~aL~~lgr~eEAl~~y~kAlel~p~d~~~~~~~~~~~~~~~~~ 152 (159)
T 2hr2_A 87 FNRRGELNQDEGKLWISAVYSRALALDGLGRGAEAMPEFKKVVEMIEERKGETPGKERMMEVAIDR 152 (159)
T ss_dssp HHHHCCTTSTHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCCSCCTTHHHHHHHHHHH
T ss_pred hhccccCCCchHHHHHHHHHhHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHH
Confidence 99999999 99999999999999999999999999999999988888887776654
No 6
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=99.78 E-value=3.4e-18 Score=148.72 Aligned_cols=111 Identities=12% Similarity=0.056 Sum_probs=107.4
Q ss_pred CccCChhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcCCCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Q psy4703 1 MIDNNMNDYNKLKESGNSAFKQGDYETALDFYTKALKVTAEESHERATCLKNRAAVYLKQNQNDKVIEDCSKSLEIVPDD 80 (401)
Q Consensus 1 ~i~~~p~~a~~l~~~Gn~~~~~g~y~eAi~~y~~Al~l~~p~~~~~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~ldP~~ 80 (401)
++..+|+++..++..|..++..|+|++|+.+|++++.++ |+ ++.+|+++|.+|..+|+|++|+.+|+++++++|++
T Consensus 28 al~l~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~-P~---~~~~~~~lg~~~~~~g~~~~Ai~~~~~al~l~P~~ 103 (151)
T 3gyz_A 28 INAIPDDMMDDIYSYAYDFYNKGRIEEAEVFFRFLCIYD-FY---NVDYIMGLAAIYQIKEQFQQAADLYAVAFALGKND 103 (151)
T ss_dssp GCCSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TT---CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSSSC
T ss_pred HhCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-CC---CHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCCCC
Confidence 467899999999999999999999999999999999999 77 89999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCc
Q psy4703 81 PKALFRRCQAYEAIGKFEEAYTDAKHIHRVEPTNK 115 (401)
Q Consensus 81 ~kA~~~~a~a~~~lg~~eeA~~~~~kal~l~P~~~ 115 (401)
+.+|+++|.+|..+|++++|+.+|+++++++|+++
T Consensus 104 ~~~~~~lg~~~~~lg~~~eA~~~~~~al~l~~~~~ 138 (151)
T 3gyz_A 104 YTPVFHTGQCQLRLKAPLKAKECFELVIQHSNDEK 138 (151)
T ss_dssp CHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHH
T ss_pred cHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCHH
Confidence 99999999999999999999999999999999864
No 7
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=99.78 E-value=3.6e-18 Score=141.31 Aligned_cols=118 Identities=22% Similarity=0.310 Sum_probs=112.0
Q ss_pred hhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcCCCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHH
Q psy4703 6 MNDYNKLKESGNSAFKQGDYETALDFYTKALKVTAEESHERATCLKNRAAVYLKQNQNDKVIEDCSKSLEIVPDDPKALF 85 (401)
Q Consensus 6 p~~a~~l~~~Gn~~~~~g~y~eAi~~y~~Al~l~~p~~~~~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~ldP~~~kA~~ 85 (401)
|..++.++..|+.++..|+|++|+.+|+++++++ |+ ++.+|+++|.+|+++|+|++|+.+|+++++++|+++.+++
T Consensus 1 p~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~-p~---~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~ 76 (126)
T 3upv_A 1 SMKAEEARLEGKEYFTKSDWPNAVKAYTEMIKRA-PE---DARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRAYI 76 (126)
T ss_dssp CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TT---CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred CchHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhC-CC---ChHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHHHHH
Confidence 5688999999999999999999999999999999 76 8899999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHhhC------CCCccHHHHHHHHHHH
Q psy4703 86 RRCQAYEAIGKFEEAYTDAKHIHRVE------PTNKAIQPVLSRLFAI 127 (401)
Q Consensus 86 ~~a~a~~~lg~~eeA~~~~~kal~l~------P~~~~~~~~L~~l~~~ 127 (401)
++|.++..+|++++|+.+|+++++++ |+++.+...+.++...
T Consensus 77 ~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~p~~~~~~~~l~~~~~~ 124 (126)
T 3upv_A 77 RKATAQIAVKEYASALETLDAARTKDAEVNNGSSAREIDQLYYKASQQ 124 (126)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHHHHHTTTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCHHHHHHHHHHHHHhCcccCCchhHHHHHHHHHHHHHh
Confidence 99999999999999999999999999 9998888888776543
No 8
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=99.77 E-value=1e-17 Score=179.96 Aligned_cols=164 Identities=16% Similarity=0.155 Sum_probs=148.9
Q ss_pred CChhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcCCCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHH
Q psy4703 4 NNMNDYNKLKESGNSAFKQGDYETALDFYTKALKVTAEESHERATCLKNRAAVYLKQNQNDKVIEDCSKSLEIVPDDPKA 83 (401)
Q Consensus 4 ~~p~~a~~l~~~Gn~~~~~g~y~eAi~~y~~Al~l~~p~~~~~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~ldP~~~kA 83 (401)
-.|++++++.++|+.+...|+|++|+.+|++|++++ |+ ++.+|+|+|.+|.++|++++|+.+|++||+++|+++.+
T Consensus 4 s~P~~a~al~nLG~~~~~~G~~~eAi~~~~kAl~l~-P~---~~~a~~nLg~~l~~~g~~~eA~~~~~~Al~l~P~~~~a 79 (723)
T 4gyw_A 4 SCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVF-PE---FAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADA 79 (723)
T ss_dssp --CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-SC---CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH
T ss_pred CCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-CC---CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHH
Confidence 469999999999999999999999999999999999 77 89999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CCCChhHHHHH
Q psy4703 84 LFRRCQAYEAIGKFEEAYTDAKHIHRVEPTNKAIQPVLSRLFAIVTKRMQENEQLQNKVHNMFKYVFD-TSAPMDKRVTA 162 (401)
Q Consensus 84 ~~~~a~a~~~lg~~eeA~~~~~kal~l~P~~~~~~~~L~~l~~~~~~~~~a~~~~~~~~~~~~~~~~~-~~~~~~~~~~a 162 (401)
|+++|.+|..+|++++|+.+|+++++++|++..++..++.++...++..++.. +|++++. .|...+.....
T Consensus 80 ~~nLg~~l~~~g~~~~A~~~~~kAl~l~P~~~~a~~~Lg~~~~~~g~~~eAi~--------~~~~Al~l~P~~~~a~~~L 151 (723)
T 4gyw_A 80 YSNMGNTLKEMQDVQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIA--------SYRTALKLKPDFPDAYCNL 151 (723)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHH--------HHHHHHHHCSCCHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHH--------HHHHHHHhCCCChHHHhhh
Confidence 99999999999999999999999999999999999999999999988765544 7788877 67777888888
Q ss_pred HHHHHHhhhcchhhHHH
Q psy4703 163 VNNLVVLAREMSGAEML 179 (401)
Q Consensus 163 ~~~L~~l~~~~~gae~~ 179 (401)
+..+..+++.+.+.+.+
T Consensus 152 ~~~l~~~g~~~~A~~~~ 168 (723)
T 4gyw_A 152 AHCLQIVCDWTDYDERM 168 (723)
T ss_dssp HHHHHHTTCCTTHHHHH
T ss_pred hhHHHhcccHHHHHHHH
Confidence 88888888876655444
No 9
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=99.77 E-value=1.6e-17 Score=141.05 Aligned_cols=127 Identities=11% Similarity=0.157 Sum_probs=118.8
Q ss_pred CccCChhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcCCCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Q psy4703 1 MIDNNMNDYNKLKESGNSAFKQGDYETALDFYTKALKVTAEESHERATCLKNRAAVYLKQNQNDKVIEDCSKSLEIVPDD 80 (401)
Q Consensus 1 ~i~~~p~~a~~l~~~Gn~~~~~g~y~eAi~~y~~Al~l~~p~~~~~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~ldP~~ 80 (401)
++..+|++...++..|..++..|+|++|+..|++++..+ |+ ++.+|+++|.+|..+|+|++|+.+|++++.++|++
T Consensus 10 al~~~p~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~-p~---~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~ 85 (142)
T 2xcb_A 10 LRGLSEDTLEQLYALGFNQYQAGKWDDAQKIFQALCMLD-HY---DARYFLGLGACRQSLGLYEQALQSYSYGALMDINE 85 (142)
T ss_dssp CTTCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TT---CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred HHcCCHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhC-Cc---cHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCC
Confidence 467899999999999999999999999999999999999 76 89999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCccHHHHHHHHHHHHHHH
Q psy4703 81 PKALFRRCQAYEAIGKFEEAYTDAKHIHRVEPTNKAIQPVLSRLFAIVTKR 131 (401)
Q Consensus 81 ~kA~~~~a~a~~~lg~~eeA~~~~~kal~l~P~~~~~~~~L~~l~~~~~~~ 131 (401)
+.+++.+|.+|..+|++++|+..|+++++++|+++.......++...+...
T Consensus 86 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~l~~l 136 (142)
T 2xcb_A 86 PRFPFHAAECHLQLGDLDGAESGFYSARALAAAQPAHEALAARAGAMLEAV 136 (142)
T ss_dssp THHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCGGGHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999998887777766655543
No 10
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=99.76 E-value=1.4e-17 Score=151.94 Aligned_cols=161 Identities=18% Similarity=0.225 Sum_probs=132.8
Q ss_pred hhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcCCCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHH
Q psy4703 6 MNDYNKLKESGNSAFKQGDYETALDFYTKALKVTAEESHERATCLKNRAAVYLKQNQNDKVIEDCSKSLEIVPDDPKALF 85 (401)
Q Consensus 6 p~~a~~l~~~Gn~~~~~g~y~eAi~~y~~Al~l~~p~~~~~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~ldP~~~kA~~ 85 (401)
|.++..+...|..++..|++++|+..|+++++++ |+ ++.+++++|.++..+|++++|+..|+++++++|+++.+++
T Consensus 2 p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~-p~---~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~ 77 (217)
T 2pl2_A 2 QTAEQNPLRLGVQLYALGRYDAALTLFERALKEN-PQ---DPEALYWLARTQLKLGLVNPALENGKTLVARTPRYLGGYM 77 (217)
T ss_dssp --CCHHHHHHHHHHHHTTCHHHHHHHHHHHHTTS-SS---CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred CCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-CC---CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHH
Confidence 6677888899999999999999999999999999 76 8889999999999999999999999999999999999999
Q ss_pred HHHHHHHHc-----------CCHHHHHHHHHHHHhhCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCC
Q psy4703 86 RRCQAYEAI-----------GKFEEAYTDAKHIHRVEPTNKAIQPVLSRLFAIVTKRMQENEQLQNKVHNMFKYVFDTSA 154 (401)
Q Consensus 86 ~~a~a~~~l-----------g~~eeA~~~~~kal~l~P~~~~~~~~L~~l~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~ 154 (401)
.+|.++..+ |++++|+..|+++++++|++..++..++.++...++..++.. .|+.++....
T Consensus 78 ~lg~~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~P~~~~~~~~lg~~~~~~g~~~~A~~--------~~~~al~~~~ 149 (217)
T 2pl2_A 78 VLSEAYVALYRQAEDRERGKGYLEQALSVLKDAERVNPRYAPLHLQRGLVYALLGERDKAEA--------SLKQALALED 149 (217)
T ss_dssp HHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHH--------HHHHHHHHCC
T ss_pred HHHHHHHHhhhhhhhhcccccCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHcCChHHHHH--------HHHHHHhccc
Confidence 999999999 999999999999999999999999999988888888755544 5666665235
Q ss_pred ChhHHHHHHHHHHHhhhcchhhHH
Q psy4703 155 PMDKRVTAVNNLVVLAREMSGAEM 178 (401)
Q Consensus 155 ~~~~~~~a~~~L~~l~~~~~gae~ 178 (401)
+..........+...++.+++...
T Consensus 150 ~~~~~~~la~~~~~~g~~~~A~~~ 173 (217)
T 2pl2_A 150 TPEIRSALAELYLSMGRLDEALAQ 173 (217)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHH
T ss_pred chHHHHHHHHHHHHcCCHHHHHHH
Confidence 566667777777777777655433
No 11
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=99.76 E-value=6.9e-18 Score=141.48 Aligned_cols=112 Identities=23% Similarity=0.304 Sum_probs=101.8
Q ss_pred ChhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcCCCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC----
Q psy4703 5 NMNDYNKLKESGNSAFKQGDYETALDFYTKALKVTAEESHERATCLKNRAAVYLKQNQNDKVIEDCSKSLEIVPDD---- 80 (401)
Q Consensus 5 ~p~~a~~l~~~Gn~~~~~g~y~eAi~~y~~Al~l~~p~~~~~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~ldP~~---- 80 (401)
.++.+.++++.|+.+++.|+|++|+.+|++||+++ |+ ++.+|.|+|.+|+++|+|++|+.+|+++|+++|++
T Consensus 4 ~~d~A~a~~~lG~~~~~~~~~~~A~~~y~~Al~~~-p~---~~~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~ 79 (127)
T 4gcn_A 4 MTDAAIAEKDLGNAAYKQKDFEKAHVHYDKAIELD-PS---NITFYNNKAAVYFEEKKFAECVQFCEKAVEVGRETRADY 79 (127)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TT---CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCH
T ss_pred cHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-CC---CHHHHHhHHHHHHHhhhHHHHHHHHHHHHHhCcccchhh
Confidence 35678899999999999999999999999999999 77 89999999999999999999999999999999866
Q ss_pred ---HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCccHHHHH
Q psy4703 81 ---PKALFRRCQAYEAIGKFEEAYTDAKHIHRVEPTNKAIQPVL 121 (401)
Q Consensus 81 ---~kA~~~~a~a~~~lg~~eeA~~~~~kal~l~P~~~~~~~~L 121 (401)
.++|+++|.++..+|+|++|+.+|+++++++|+ ++....+
T Consensus 80 ~~~a~~~~~lg~~~~~~~~~~~A~~~~~kal~~~~~-~~~~~~l 122 (127)
T 4gcn_A 80 KLIAKAMSRAGNAFQKQNDLSLAVQWFHRSLSEFRD-PELVKKV 122 (127)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCC-HHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcC-HHHHHHH
Confidence 468999999999999999999999999999885 4443333
No 12
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=99.76 E-value=1.5e-17 Score=143.23 Aligned_cols=125 Identities=13% Similarity=0.155 Sum_probs=116.7
Q ss_pred ccCChhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcCCCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH
Q psy4703 2 IDNNMNDYNKLKESGNSAFKQGDYETALDFYTKALKVTAEESHERATCLKNRAAVYLKQNQNDKVIEDCSKSLEIVPDDP 81 (401)
Q Consensus 2 i~~~p~~a~~l~~~Gn~~~~~g~y~eAi~~y~~Al~l~~p~~~~~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~ldP~~~ 81 (401)
+..+|+++..+...|..++..|+|++|+..|++++.++ |+ ++.+|+++|.+|..+|+|++|+.+|++++.++|+++
T Consensus 14 l~~~p~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~-p~---~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~ 89 (148)
T 2vgx_A 14 NEISSDTLEQLYSLAFNQYQSGXYEDAHXVFQALCVLD-HY---DSRFFLGLGACRQAMGQYDLAIHSYSYGAVMDIXEP 89 (148)
T ss_dssp TTCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TT---CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCT
T ss_pred HcCCHhhHHHHHHHHHHHHHcCChHHHHHHHHHHHHcC-cc---cHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCc
Confidence 67899999999999999999999999999999999999 76 899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCccHHHHHHHHHHHHHH
Q psy4703 82 KALFRRCQAYEAIGKFEEAYTDAKHIHRVEPTNKAIQPVLSRLFAIVTK 130 (401)
Q Consensus 82 kA~~~~a~a~~~lg~~eeA~~~~~kal~l~P~~~~~~~~L~~l~~~~~~ 130 (401)
.+++++|.+|..+|++++|+.+|+++++++|+++.......++...+..
T Consensus 90 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~l~~ 138 (148)
T 2vgx_A 90 RFPFHAAECLLQXGELAEAESGLFLAQELIANXPEFXELSTRVSSMLEA 138 (148)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCGGGHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCCCcchHHHHHHHHHHHH
Confidence 9999999999999999999999999999999998887766666555443
No 13
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=99.76 E-value=2.6e-17 Score=150.17 Aligned_cols=162 Identities=15% Similarity=0.172 Sum_probs=140.9
Q ss_pred ccCChhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcCCCCcchHHHHHHHHHHHHHc-----------CCHHHHHHHH
Q psy4703 2 IDNNMNDYNKLKESGNSAFKQGDYETALDFYTKALKVTAEESHERATCLKNRAAVYLKQ-----------NQNDKVIEDC 70 (401)
Q Consensus 2 i~~~p~~a~~l~~~Gn~~~~~g~y~eAi~~y~~Al~l~~p~~~~~~~~~~n~a~~y~kl-----------g~y~~Ai~~~ 70 (401)
|+.+|+++..+...|..+...|++++|+..|+++++++ |+ +..+++++|.+|..+ |++++|+..|
T Consensus 32 l~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~-P~---~~~a~~~lg~~~~~~~~~~~~~~~~~g~~~~A~~~~ 107 (217)
T 2pl2_A 32 LKENPQDPEALYWLARTQLKLGLVNPALENGKTLVART-PR---YLGGYMVLSEAYVALYRQAEDRERGKGYLEQALSVL 107 (217)
T ss_dssp HTTSSSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TT---CHHHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHH
T ss_pred HHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-CC---cHHHHHHHHHHHHHhhhhhhhhcccccCHHHHHHHH
Confidence 57899999999999999999999999999999999999 77 899999999999999 9999999999
Q ss_pred HHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy4703 71 SKSLEIVPDDPKALFRRCQAYEAIGKFEEAYTDAKHIHRVEPTNKAIQPVLSRLFAIVTKRMQENEQLQNKVHNMFKYVF 150 (401)
Q Consensus 71 ~kAL~ldP~~~kA~~~~a~a~~~lg~~eeA~~~~~kal~l~P~~~~~~~~L~~l~~~~~~~~~a~~~~~~~~~~~~~~~~ 150 (401)
+++++++|+++.+++.+|.++..+|++++|+..|+++++++ +++.++..++.++...++..++.. .|+.++
T Consensus 108 ~~al~~~P~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~-~~~~~~~~la~~~~~~g~~~~A~~--------~~~~al 178 (217)
T 2pl2_A 108 KDAERVNPRYAPLHLQRGLVYALLGERDKAEASLKQALALE-DTPEIRSALAELYLSMGRLDEALA--------QYAKAL 178 (217)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-CCHHHHHHHHHHHHHHTCHHHHHH--------HHHHHH
T ss_pred HHHHHhCcccHHHHHHHHHHHHHcCChHHHHHHHHHHHhcc-cchHHHHHHHHHHHHcCCHHHHHH--------HHHHHH
Confidence 99999999999999999999999999999999999999999 999999999999999988755544 778887
Q ss_pred c-CCCChhHHHHHHHHHHHhhhcchhh
Q psy4703 151 D-TSAPMDKRVTAVNNLVVLAREMSGA 176 (401)
Q Consensus 151 ~-~~~~~~~~~~a~~~L~~l~~~~~ga 176 (401)
. .|.+..........+...++.+++.
T Consensus 179 ~~~P~~~~~~~~la~~~~~~g~~~~A~ 205 (217)
T 2pl2_A 179 EQAPKDLDLRVRYASALLLKGKAEEAA 205 (217)
T ss_dssp HHSTTCHHHHHHHHHHHTC--------
T ss_pred HhCCCChHHHHHHHHHHHHccCHHHHH
Confidence 7 6666666666666666777765443
No 14
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=99.75 E-value=5e-18 Score=146.37 Aligned_cols=122 Identities=12% Similarity=0.145 Sum_probs=112.4
Q ss_pred ccCChhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcCCCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH
Q psy4703 2 IDNNMNDYNKLKESGNSAFKQGDYETALDFYTKALKVTAEESHERATCLKNRAAVYLKQNQNDKVIEDCSKSLEIVPDDP 81 (401)
Q Consensus 2 i~~~p~~a~~l~~~Gn~~~~~g~y~eAi~~y~~Al~l~~p~~~~~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~ldP~~~ 81 (401)
+..+|+.+..++..|..|+..|+|++|+.+|+++++++ |+ ++.+|+++|.+|..+|++++|+.+|+++++++|+++
T Consensus 24 ~~~~p~~~~~~~~la~~y~~~~~~~~A~~~~~~al~~~-p~---~~~a~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~ 99 (150)
T 4ga2_A 24 TPSPRQKSIKGFYFAKLYYEAKEYDLAKKYICTYINVQ-ER---DPKAHRFLGLLYELEENTDKAVECYRRSVELNPTQK 99 (150)
T ss_dssp SCSHHHHHTTHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TT---CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred cccCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-CC---CHHHHHHHHHHHHHcCchHHHHHHHHHHHHhCCCCH
Confidence 45678889999999999999999999999999999999 77 899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCHHHHHHH-HHHHHhhCCCCccHHHHHHHHHHH
Q psy4703 82 KALFRRCQAYEAIGKFEEAYTD-AKHIHRVEPTNKAIQPVLSRLFAI 127 (401)
Q Consensus 82 kA~~~~a~a~~~lg~~eeA~~~-~~kal~l~P~~~~~~~~L~~l~~~ 127 (401)
.+++++|.+|..+|++++|... ++++++++|+++.+....+++...
T Consensus 100 ~~~~~la~~~~~~~~~~~aa~~~~~~al~l~P~~~~~~~l~~~ll~~ 146 (150)
T 4ga2_A 100 DLVLKIAELLCKNDVTDGRAKYWVERAAKLFPGSPAVYKLKEQLLDC 146 (150)
T ss_dssp HHHHHHHHHHHHHCSSSSHHHHHHHHHHHHSTTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHcCChHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHH
Confidence 9999999999999999988776 599999999999998887776553
No 15
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=99.75 E-value=3.2e-17 Score=160.18 Aligned_cols=144 Identities=28% Similarity=0.376 Sum_probs=128.3
Q ss_pred cCChhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcCCCC------------cchHHHHHHHHHHHHHcCCHHHHHHHH
Q psy4703 3 DNNMNDYNKLKESGNSAFKQGDYETALDFYTKALKVTAEES------------HERATCLKNRAAVYLKQNQNDKVIEDC 70 (401)
Q Consensus 3 ~~~p~~a~~l~~~Gn~~~~~g~y~eAi~~y~~Al~l~~p~~------------~~~~~~~~n~a~~y~klg~y~~Ai~~~ 70 (401)
+.+|..+..++..|+.++..|+|++|+.+|+++++++ |+. +....+|.++|.||+++|+|++|+.+|
T Consensus 141 ~~~p~~a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~-p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~ 219 (336)
T 1p5q_A 141 EEKLEQSTIVKERGTVYFKEGKYKQALLQYKKIVSWL-EYESSFSNEEAQKAQALRLASHLNLAMCHLKLQAFSAAIESC 219 (336)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHT-TTCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHh-hccccCChHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 4578889999999999999999999999999999999 762 112689999999999999999999999
Q ss_pred HHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy4703 71 SKSLEIVPDDPKALFRRCQAYEAIGKFEEAYTDAKHIHRVEPTNKAIQPVLSRLFAIVTKRMQENEQLQNKVHNMFKYVF 150 (401)
Q Consensus 71 ~kAL~ldP~~~kA~~~~a~a~~~lg~~eeA~~~~~kal~l~P~~~~~~~~L~~l~~~~~~~~~a~~~~~~~~~~~~~~~~ 150 (401)
+++|+++|+++.+++++|.+|..+|+|++|+.+|+++++++|++..++..++.++..+++..++.. .....||..+.
T Consensus 220 ~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~a~~~l~~~~~~~~~~~~a~~---~~~~~~~~~~~ 296 (336)
T 1p5q_A 220 NKALELDSNNEKGLSRRGEAHLAVNDFELARADFQKVLQLYPNNKAAKTQLAVCQQRIRRQLAREK---KLYANMFERLA 296 (336)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHH
T ss_pred HHHHHhCCCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHhh
Confidence 999999999999999999999999999999999999999999999999999999999988876655 23344555443
No 16
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=99.75 E-value=6e-17 Score=140.43 Aligned_cols=113 Identities=27% Similarity=0.316 Sum_probs=108.0
Q ss_pred cCChhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcCCCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH
Q psy4703 3 DNNMNDYNKLKESGNSAFKQGDYETALDFYTKALKVTAEESHERATCLKNRAAVYLKQNQNDKVIEDCSKSLEIVPDDPK 82 (401)
Q Consensus 3 ~~~p~~a~~l~~~Gn~~~~~g~y~eAi~~y~~Al~l~~p~~~~~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~ldP~~~k 82 (401)
..++.++..++..|+.++..|+|++|+.+|+++++++ |+ +..+|+++|.+|+.+|+|++|+.+|+++++++|+++.
T Consensus 5 ~~~~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~-p~---~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~ 80 (164)
T 3sz7_A 5 MAPTPESDKLKSEGNAAMARKEYSKAIDLYTQALSIA-PA---NPIYLSNRAAAYSASGQHEKAAEDAELATVVDPKYSK 80 (164)
T ss_dssp SSCCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS-TT---CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH
T ss_pred chhhhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-Cc---CHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHH
Confidence 4577899999999999999999999999999999999 76 8999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCccHHH
Q psy4703 83 ALFRRCQAYEAIGKFEEAYTDAKHIHRVEPTNKAIQP 119 (401)
Q Consensus 83 A~~~~a~a~~~lg~~eeA~~~~~kal~l~P~~~~~~~ 119 (401)
+|+++|.+|..+|++++|+.+|+++++++|++..++.
T Consensus 81 ~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~ 117 (164)
T 3sz7_A 81 AWSRLGLARFDMADYKGAKEAYEKGIEAEGNGGSDAM 117 (164)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHSSSCCHHH
T ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHHhCCCchHHHH
Confidence 9999999999999999999999999999999988543
No 17
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=99.75 E-value=2e-17 Score=168.43 Aligned_cols=145 Identities=28% Similarity=0.349 Sum_probs=122.0
Q ss_pred cCChhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcCCCCc------------chHHHHHHHHHHHHHcCCHHHHHHHH
Q psy4703 3 DNNMNDYNKLKESGNSAFKQGDYETALDFYTKALKVTAEESH------------ERATCLKNRAAVYLKQNQNDKVIEDC 70 (401)
Q Consensus 3 ~~~p~~a~~l~~~Gn~~~~~g~y~eAi~~y~~Al~l~~p~~~------------~~~~~~~n~a~~y~klg~y~~Ai~~~ 70 (401)
+.+|..+..++.+|+.+++.|+|++|+.+|++|++++ |..+ ....+|+|+|.||+++|+|++|+.+|
T Consensus 262 ~~~~~~a~~~~~~G~~~~~~g~~~~A~~~y~~Al~~~-p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~ 340 (457)
T 1kt0_A 262 KEKLEQAAIVKEKGTVYFKGGKYMQAVIQYGKIVSWL-EMEYGLSEKESKASESFLLAAFLNLAMCYLKLREYTKAVECC 340 (457)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH-TTCCSCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHh-cccccCChHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHH
Confidence 4567889999999999999999999999999999999 7621 12789999999999999999999999
Q ss_pred HHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy4703 71 SKSLEIVPDDPKALFRRCQAYEAIGKFEEAYTDAKHIHRVEPTNKAIQPVLSRLFAIVTKRMQENEQLQNKVHNMFKYVF 150 (401)
Q Consensus 71 ~kAL~ldP~~~kA~~~~a~a~~~lg~~eeA~~~~~kal~l~P~~~~~~~~L~~l~~~~~~~~~a~~~~~~~~~~~~~~~~ 150 (401)
+++|+++|+++++|+++|.+|..+|+|++|+.+|+++++++|++..++..++.++..+++..++.+ .....||..+.
T Consensus 341 ~~al~~~p~~~~a~~~~g~a~~~~g~~~~A~~~~~~al~l~P~~~~a~~~l~~~~~~~~~~~~a~~---~~~~~~f~k~~ 417 (457)
T 1kt0_A 341 DKALGLDSANEKGLYRRGEAQLLMNEFESAKGDFEKVLEVNPQNKAARLQISMCQKKAKEHNERDR---RIYANMFKKFA 417 (457)
T ss_dssp HHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC----CHHHHHHHHHHHHHHHHHHHH---HHHHHC-----
T ss_pred HHHHhcCCccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHhhhh
Confidence 999999999999999999999999999999999999999999999999999999999988776655 33445555554
Q ss_pred c
Q psy4703 151 D 151 (401)
Q Consensus 151 ~ 151 (401)
.
T Consensus 418 ~ 418 (457)
T 1kt0_A 418 E 418 (457)
T ss_dssp -
T ss_pred h
Confidence 4
No 18
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=99.74 E-value=1.5e-16 Score=144.17 Aligned_cols=121 Identities=16% Similarity=0.225 Sum_probs=113.6
Q ss_pred hHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcCCCCcchHHHHHH----------------HHHHHHHcCCHHHHHHHH
Q psy4703 7 NDYNKLKESGNSAFKQGDYETALDFYTKALKVTAEESHERATCLKN----------------RAAVYLKQNQNDKVIEDC 70 (401)
Q Consensus 7 ~~a~~l~~~Gn~~~~~g~y~eAi~~y~~Al~l~~p~~~~~~~~~~n----------------~a~~y~klg~y~~Ai~~~ 70 (401)
++++.+..+|..++..|+|++|+.+|+++++++ |+ ++.++++ +|.+|.++|+|++|+..|
T Consensus 2 ~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~-p~---~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~ 77 (208)
T 3urz_A 2 QSVDEMLQKVSAAIEAGQNGQAVSYFRQTIALN-ID---RTEMYYWTNVDKNSEISSKLATELALAYKKNRNYDKAYLFY 77 (208)
T ss_dssp -CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-HH---HHHHHHHHHSCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhC-CC---ChHHHHHhhhcchhhhhHHHHHHHHHHHHHCCCHHHHHHHH
Confidence 357788999999999999999999999999999 65 8888998 999999999999999999
Q ss_pred HHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCccHHHHHHHHHHHHHHH
Q psy4703 71 SKSLEIVPDDPKALFRRCQAYEAIGKFEEAYTDAKHIHRVEPTNKAIQPVLSRLFAIVTKR 131 (401)
Q Consensus 71 ~kAL~ldP~~~kA~~~~a~a~~~lg~~eeA~~~~~kal~l~P~~~~~~~~L~~l~~~~~~~ 131 (401)
+++++++|+++.+++.+|.+|..+|++++|+.+|+++++++|++..++..++.++...++.
T Consensus 78 ~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~~~~ 138 (208)
T 3urz_A 78 KELLQKAPNNVDCLEACAEMQVCRGQEKDALRMYEKILQLEADNLAANIFLGNYYYLTAEQ 138 (208)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHhHH
Confidence 9999999999999999999999999999999999999999999999999999988766543
No 19
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=99.73 E-value=3.6e-16 Score=137.17 Aligned_cols=158 Identities=12% Similarity=0.105 Sum_probs=142.1
Q ss_pred hHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcCCCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHH
Q psy4703 7 NDYNKLKESGNSAFKQGDYETALDFYTKALKVTAEESHERATCLKNRAAVYLKQNQNDKVIEDCSKSLEIVPDDPKALFR 86 (401)
Q Consensus 7 ~~a~~l~~~Gn~~~~~g~y~eAi~~y~~Al~l~~p~~~~~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~ldP~~~kA~~~ 86 (401)
+++..|.+.|+.++..|+|++|+.+|+++++++ |+ +..++.++|.+|.++|++++|+..+.+++..+|.++.++..
T Consensus 3 e~~~iy~~lG~~~~~~g~~~~A~~~~~~al~~~-p~---~~~~~~~la~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~ 78 (184)
T 3vtx_A 3 ETTTIYMDIGDKKRTKGDFDGAIRAYKKVLKAD-PN---NVETLLKLGKTYMDIGLPNDAIESLKKFVVLDTTSAEAYYI 78 (184)
T ss_dssp -CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC-TT---CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCCHHHHHH
T ss_pred cHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-CC---CHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCchhHHHHHH
Confidence 467889999999999999999999999999999 77 89999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHhhCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CCCChhHHHHHHHH
Q psy4703 87 RCQAYEAIGKFEEAYTDAKHIHRVEPTNKAIQPVLSRLFAIVTKRMQENEQLQNKVHNMFKYVFD-TSAPMDKRVTAVNN 165 (401)
Q Consensus 87 ~a~a~~~lg~~eeA~~~~~kal~l~P~~~~~~~~L~~l~~~~~~~~~a~~~~~~~~~~~~~~~~~-~~~~~~~~~~a~~~ 165 (401)
+|.++...++++.|...+++++.++|++..++..++.++...++..++.. +|+.++. .|.+.......+..
T Consensus 79 ~~~~~~~~~~~~~a~~~~~~a~~~~~~~~~~~~~lg~~~~~~g~~~~A~~--------~~~~~l~~~p~~~~~~~~lg~~ 150 (184)
T 3vtx_A 79 LGSANFMIDEKQAAIDALQRAIALNTVYADAYYKLGLVYDSMGEHDKAIE--------AYEKTISIKPGFIRAYQSIGLA 150 (184)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHH--------HHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHHHhCCchhHHH--------HHHHHHHhcchhhhHHHHHHHH
Confidence 99999999999999999999999999999999999999999888755544 6777777 67777777778888
Q ss_pred HHHhhhcchhh
Q psy4703 166 LVVLAREMSGA 176 (401)
Q Consensus 166 L~~l~~~~~ga 176 (401)
+..+++.+++.
T Consensus 151 ~~~~g~~~~A~ 161 (184)
T 3vtx_A 151 YEGKGLRDEAV 161 (184)
T ss_dssp HHHTTCHHHHH
T ss_pred HHHCCCHHHHH
Confidence 88888865443
No 20
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=99.73 E-value=7e-16 Score=140.19 Aligned_cols=160 Identities=16% Similarity=0.200 Sum_probs=125.8
Q ss_pred hhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcCC-CCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHH
Q psy4703 6 MNDYNKLKESGNSAFKQGDYETALDFYTKALKVTAE-ESHERATCLKNRAAVYLKQNQNDKVIEDCSKSLEIVPDDPKAL 84 (401)
Q Consensus 6 p~~a~~l~~~Gn~~~~~g~y~eAi~~y~~Al~l~~p-~~~~~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~ldP~~~kA~ 84 (401)
+.++..++..|..++..|+|++|+.+|+++++++ | . +..+++++|.+|..+|+|++|+.+|+++++++|+++.++
T Consensus 4 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~-~~~---~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~ 79 (228)
T 4i17_A 4 TTDPNQLKNEGNDALNAKNYAVAFEKYSEYLKLT-NNQ---DSVTAYNCGVCADNIKKYKEAADYFDIAIKKNYNLANAY 79 (228)
T ss_dssp CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHT-TTC---CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCSHHHHH
T ss_pred ccCHHHHHHHHHHHHHccCHHHHHHHHHHHHhcc-CCC---CcHHHHHHHHHHHHhhcHHHHHHHHHHHHHhCcchHHHH
Confidence 4456899999999999999999999999999999 6 4 678889999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHhhCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCC---hhHHHH
Q psy4703 85 FRRCQAYEAIGKFEEAYTDAKHIHRVEPTNKAIQPVLSRLFAIVTKRMQENEQLQNKVHNMFKYVFDTSAP---MDKRVT 161 (401)
Q Consensus 85 ~~~a~a~~~lg~~eeA~~~~~kal~l~P~~~~~~~~L~~l~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 161 (401)
+.+|.+|..+|++++|+..|+++++++|+++.....+..++..++........+ ..+..+|+.++...++ ......
T Consensus 80 ~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~-~~A~~~~~~al~~~p~~~~~~~~~~ 158 (228)
T 4i17_A 80 IGKSAAYRDMKNNQEYIATLTEGIKAVPGNATIEKLYAIYYLKEGQKFQQAGNI-EKAEENYKHATDVTSKKWKTDALYS 158 (228)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHTTCH-HHHHHHHHHHTTSSCHHHHHHHHHH
T ss_pred HHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHhHHHHHhccH-HHHHHHHHHHHhcCCCcccHHHHHH
Confidence 999999999999999999999999999999955444444444333332222222 3455578888884433 344444
Q ss_pred HHHHHHHhh
Q psy4703 162 AVNNLVVLA 170 (401)
Q Consensus 162 a~~~L~~l~ 170 (401)
....+...+
T Consensus 159 l~~~~~~~~ 167 (228)
T 4i17_A 159 LGVLFYNNG 167 (228)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 444444433
No 21
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=99.71 E-value=1.5e-16 Score=158.83 Aligned_cols=155 Identities=8% Similarity=-0.043 Sum_probs=140.3
Q ss_pred ccCChhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcCCCCcchHHHHHHHHHHHHHcCC-HHHHHHHHHHHHHhCCCC
Q psy4703 2 IDNNMNDYNKLKESGNSAFKQGDYETALDFYTKALKVTAEESHERATCLKNRAAVYLKQNQ-NDKVIEDCSKSLEIVPDD 80 (401)
Q Consensus 2 i~~~p~~a~~l~~~Gn~~~~~g~y~eAi~~y~~Al~l~~p~~~~~~~~~~n~a~~y~klg~-y~~Ai~~~~kAL~ldP~~ 80 (401)
|..+|+.+.++...|..+...|++++|+..|+++|+++ |+ +..+|+++|.++..+|+ +++|+.+|+++|+++|++
T Consensus 90 i~~~p~~~~a~~~lg~~~~~~g~~~~Al~~~~~al~l~-P~---~~~a~~~~g~~l~~~g~d~~eAl~~~~~al~l~P~~ 165 (382)
T 2h6f_A 90 IIYSDKFRDVYDYFRAVLQRDERSERAFKLTRDAIELN-AA---NYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPKN 165 (382)
T ss_dssp ECCCHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHC-TT---CHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTC
T ss_pred hhCChhhHHHHHHHHHHHHHCCChHHHHHHHHHHHHhC-cc---CHHHHHHHHHHHHHcccCHHHHHHHHHHHHHHCCCC
Confidence 67889999999999999999999999999999999999 77 89999999999999997 999999999999999999
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CCCChhHH
Q psy4703 81 PKALFRRCQAYEAIGKFEEAYTDAKHIHRVEPTNKAIQPVLSRLFAIVTKRMQENEQLQNKVHNMFKYVFD-TSAPMDKR 159 (401)
Q Consensus 81 ~kA~~~~a~a~~~lg~~eeA~~~~~kal~l~P~~~~~~~~L~~l~~~~~~~~~a~~~~~~~~~~~~~~~~~-~~~~~~~~ 159 (401)
+.+|+++|.++..+|++++|+.+|+++++++|++..++..++.++..+++..++ ..+|++++. .|.+....
T Consensus 166 ~~a~~~~g~~~~~~g~~~eAl~~~~kal~ldP~~~~a~~~lg~~~~~~g~~~eA--------l~~~~~al~l~P~~~~a~ 237 (382)
T 2h6f_A 166 YQVWHHRRVLVEWLRDPSQELEFIADILNQDAKNYHAWQHRQWVIQEFKLWDNE--------LQYVDQLLKEDVRNNSVW 237 (382)
T ss_dssp HHHHHHHHHHHHHHTCCTTHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCCTTH--------HHHHHHHHHHCTTCHHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCccCHHHHHHHHHHHHHcCChHHH--------HHHHHHHHHhCCCCHHHH
Confidence 999999999999999999999999999999999999999999999998877544 347888887 56666666
Q ss_pred HHHHHHHHH
Q psy4703 160 VTAVNNLVV 168 (401)
Q Consensus 160 ~~a~~~L~~ 168 (401)
......+..
T Consensus 238 ~~lg~~l~~ 246 (382)
T 2h6f_A 238 NQRYFVISN 246 (382)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 666555555
No 22
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=99.71 E-value=2.5e-17 Score=141.94 Aligned_cols=139 Identities=12% Similarity=0.036 Sum_probs=116.8
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHhhcCCCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc
Q psy4703 15 SGNSAFKQGDYETALDFYTKALKVTAEESHERATCLKNRAAVYLKQNQNDKVIEDCSKSLEIVPDDPKALFRRCQAYEAI 94 (401)
Q Consensus 15 ~Gn~~~~~g~y~eAi~~y~~Al~l~~p~~~~~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~ldP~~~kA~~~~a~a~~~l 94 (401)
.|..+..+|++++|+..|.+++..+ |+ ++..++++|.+|+++|+|++|+.+|+++|+++|+++.+|+.+|.+|..+
T Consensus 3 LG~~~~~~~~~e~ai~~~~~a~~~~-p~---~~~~~~~la~~y~~~~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~ 78 (150)
T 4ga2_A 3 LGSMRRSKADVERYIASVQGSTPSP-RQ---KSIKGFYFAKLYYEAKEYDLAKKYICTYINVQERDPKAHRFLGLLYELE 78 (150)
T ss_dssp ----CCCHHHHHHHHHHHHHHSCSH-HH---HHTTHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT
T ss_pred hHHHHHHcChHHHHHHHHHHhcccC-cc---cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc
Confidence 5788888999999999999999999 55 8889999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHhhCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CCCChhHHHHHHH
Q psy4703 95 GKFEEAYTDAKHIHRVEPTNKAIQPVLSRLFAIVTKRMQENEQLQNKVHNMFKYVFD-TSAPMDKRVTAVN 164 (401)
Q Consensus 95 g~~eeA~~~~~kal~l~P~~~~~~~~L~~l~~~~~~~~~a~~~~~~~~~~~~~~~~~-~~~~~~~~~~a~~ 164 (401)
|++++|+.+|+++++++|+++.++..++.++...++..++ +..+++++.. .|.+........+
T Consensus 79 ~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~a-------a~~~~~~al~l~P~~~~~~~l~~~ 142 (150)
T 4ga2_A 79 ENTDKAVECYRRSVELNPTQKDLVLKIAELLCKNDVTDGR-------AKYWVERAAKLFPGSPAVYKLKEQ 142 (150)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCSSSSH-------HHHHHHHHHHHSTTCHHHHHHHHH
T ss_pred CchHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCChHHH-------HHHHHHHHHHhCcCCHHHHHHHHH
Confidence 9999999999999999999999999999998877765322 3334577777 5555544443333
No 23
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=99.70 E-value=3.8e-16 Score=129.93 Aligned_cols=123 Identities=24% Similarity=0.296 Sum_probs=111.9
Q ss_pred cCChhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcCCCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH
Q psy4703 3 DNNMNDYNKLKESGNSAFKQGDYETALDFYTKALKVTAEESHERATCLKNRAAVYLKQNQNDKVIEDCSKSLEIVPDDPK 82 (401)
Q Consensus 3 ~~~p~~a~~l~~~Gn~~~~~g~y~eAi~~y~~Al~l~~p~~~~~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~ldP~~~k 82 (401)
..+|.++..+...|..++..|+|++|+.+|.+++.++ |+ +..+++++|.+|+.+|+|++|+.+|+++++++|+++.
T Consensus 3 ~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~-~~---~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~ 78 (137)
T 3q49_B 3 HMKSPSAQELKEQGNRLFVGRKYPEAAACYGRAITRN-PL---VAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVK 78 (137)
T ss_dssp ---CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TT---CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH
T ss_pred CCccccHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhC-cC---cHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCchhHH
Confidence 4577889999999999999999999999999999999 76 7899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC-----CccHHHHHHHHHHHHH
Q psy4703 83 ALFRRCQAYEAIGKFEEAYTDAKHIHRVEPT-----NKAIQPVLSRLFAIVT 129 (401)
Q Consensus 83 A~~~~a~a~~~lg~~eeA~~~~~kal~l~P~-----~~~~~~~L~~l~~~~~ 129 (401)
+++.+|.++..+|++++|+..|+++++++|+ +..+...+..+.....
T Consensus 79 ~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~~~~l~~~~~~~~ 130 (137)
T 3q49_B 79 AHFFLGQCQLEMESYDEAIANLQRAYSLAKEQRLNFGDDIPSALRIAKKKRW 130 (137)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCCTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHHChhHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999998 6777777766655443
No 24
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=99.70 E-value=4.3e-16 Score=139.21 Aligned_cols=130 Identities=25% Similarity=0.328 Sum_probs=117.6
Q ss_pred ChhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcCCCCcc-------------hHHHHHHHHHHHHHcCCHHHHHHHHH
Q psy4703 5 NMNDYNKLKESGNSAFKQGDYETALDFYTKALKVTAEESHE-------------RATCLKNRAAVYLKQNQNDKVIEDCS 71 (401)
Q Consensus 5 ~p~~a~~l~~~Gn~~~~~g~y~eAi~~y~~Al~l~~p~~~~-------------~~~~~~n~a~~y~klg~y~~Ai~~~~ 71 (401)
.+..+..++..|+.++..|+|++|+.+|.+++.+. |..+. ...++.++|.+|+.+|+|++|+.+|+
T Consensus 34 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~-~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~ 112 (198)
T 2fbn_A 34 KVQSAFDIKEEGNEFFKKNEINEAIVKYKEALDFF-IHTEEWDDQILLDKKKNIEISCNLNLATCYNKNKDYPKAIDHAS 112 (198)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTT-TTCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH-hcccccchhhHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHH
Confidence 45678899999999999999999999999999998 65220 13899999999999999999999999
Q ss_pred HHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCccHHHHHHHHHHHHHHHHHHH
Q psy4703 72 KSLEIVPDDPKALFRRCQAYEAIGKFEEAYTDAKHIHRVEPTNKAIQPVLSRLFAIVTKRMQEN 135 (401)
Q Consensus 72 kAL~ldP~~~kA~~~~a~a~~~lg~~eeA~~~~~kal~l~P~~~~~~~~L~~l~~~~~~~~~a~ 135 (401)
++++++|+++.+++++|.+|..+|+|++|+.+|+++++++|++..++..++.+...+++..+..
T Consensus 113 ~al~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~~~ 176 (198)
T 2fbn_A 113 KVLKIDKNNVKALYKLGVANMYFGFLEEAKENLYKAASLNPNNLDIRNSYELCVNKLKEARKKD 176 (198)
T ss_dssp HHHHHSTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHC--
T ss_pred HHHHhCcccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999998887765544
No 25
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=99.70 E-value=1.3e-16 Score=159.25 Aligned_cols=162 Identities=7% Similarity=-0.021 Sum_probs=136.7
Q ss_pred ccCChhHHHHHHHHHHHHHHcCC-HHHHHHHHHHHHhhcCCCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Q psy4703 2 IDNNMNDYNKLKESGNSAFKQGD-YETALDFYTKALKVTAEESHERATCLKNRAAVYLKQNQNDKVIEDCSKSLEIVPDD 80 (401)
Q Consensus 2 i~~~p~~a~~l~~~Gn~~~~~g~-y~eAi~~y~~Al~l~~p~~~~~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~ldP~~ 80 (401)
|..+|+++.+|..+|..+...|+ |++|+.+|+++++++ |+ +..+|+++|.++..+|+|++|+.+|+++|+++|++
T Consensus 124 l~l~P~~~~a~~~~g~~l~~~g~d~~eAl~~~~~al~l~-P~---~~~a~~~~g~~~~~~g~~~eAl~~~~kal~ldP~~ 199 (382)
T 2h6f_A 124 IELNAANYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQ-PK---NYQVWHHRRVLVEWLRDPSQELEFIADILNQDAKN 199 (382)
T ss_dssp HHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHC-TT---CHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHCTTC
T ss_pred HHhCccCHHHHHHHHHHHHHcccCHHHHHHHHHHHHHHC-CC---CHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCccC
Confidence 56799999999999999999997 999999999999999 77 89999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCccHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHhhc-CCCChhH
Q psy4703 81 PKALFRRCQAYEAIGKFEEAYTDAKHIHRVEPTNKAIQPVLSRLFAIVTKR-MQENEQLQNKVHNMFKYVFD-TSAPMDK 158 (401)
Q Consensus 81 ~kA~~~~a~a~~~lg~~eeA~~~~~kal~l~P~~~~~~~~L~~l~~~~~~~-~~a~~~~~~~~~~~~~~~~~-~~~~~~~ 158 (401)
+.+|+++|.++..+|++++|+.+|+++++++|++..++..++.++..+... .++.. .....+|+.++. .|.+...
T Consensus 200 ~~a~~~lg~~~~~~g~~~eAl~~~~~al~l~P~~~~a~~~lg~~l~~l~~~~~eA~~---~~el~~~~~Al~l~P~~~~a 276 (382)
T 2h6f_A 200 YHAWQHRQWVIQEFKLWDNELQYVDQLLKEDVRNNSVWNQRYFVISNTTGYNDRAVL---EREVQYTLEMIKLVPHNESA 276 (382)
T ss_dssp HHHHHHHHHHHHHHTCCTTHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCSCSHHHH---HHHHHHHHHHHHHSTTCHHH
T ss_pred HHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCcchHHHH---HHHHHHHHHHHHHCCCCHHH
Confidence 999999999999999999999999999999999999999999998873332 22211 122356778877 5555554
Q ss_pred HHHHHHHHHHhh
Q psy4703 159 RVTAVNNLVVLA 170 (401)
Q Consensus 159 ~~~a~~~L~~l~ 170 (401)
.......+...+
T Consensus 277 ~~~l~~ll~~~g 288 (382)
T 2h6f_A 277 WNYLKGILQDRG 288 (382)
T ss_dssp HHHHHHHHTTTC
T ss_pred HHHHHHHHHccC
Confidence 444444444433
No 26
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=99.67 E-value=1.2e-15 Score=133.78 Aligned_cols=139 Identities=12% Similarity=0.175 Sum_probs=130.3
Q ss_pred ccCChhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcCCCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH
Q psy4703 2 IDNNMNDYNKLKESGNSAFKQGDYETALDFYTKALKVTAEESHERATCLKNRAAVYLKQNQNDKVIEDCSKSLEIVPDDP 81 (401)
Q Consensus 2 i~~~p~~a~~l~~~Gn~~~~~g~y~eAi~~y~~Al~l~~p~~~~~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~ldP~~~ 81 (401)
|+.+|+++..+...|..++..|++++|+..+.+++... |+ ...++.++|.++...++++.|+..+.+++.++|.++
T Consensus 32 l~~~p~~~~~~~~la~~~~~~~~~~~a~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~~~a~~~~~~a~~~~~~~~ 107 (184)
T 3vtx_A 32 LKADPNNVETLLKLGKTYMDIGLPNDAIESLKKFVVLD-TT---SAEAYYILGSANFMIDEKQAAIDALQRAIALNTVYA 107 (184)
T ss_dssp HHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-CC---CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred HHhCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcC-ch---hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccch
Confidence 56789999999999999999999999999999999999 76 889999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q psy4703 82 KALFRRCQAYEAIGKFEEAYTDAKHIHRVEPTNKAIQPVLSRLFAIVTKRMQENEQLQNKVHNMFKYVFDT 152 (401)
Q Consensus 82 kA~~~~a~a~~~lg~~eeA~~~~~kal~l~P~~~~~~~~L~~l~~~~~~~~~a~~~~~~~~~~~~~~~~~~ 152 (401)
.+++.+|.+|..+|++++|+..|+++++++|++..++..++.++...++..++.. +|+++++.
T Consensus 108 ~~~~~lg~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~lg~~~~~~g~~~~A~~--------~~~~al~~ 170 (184)
T 3vtx_A 108 DAYYKLGLVYDSMGEHDKAIEAYEKTISIKPGFIRAYQSIGLAYEGKGLRDEAVK--------YFKKALEK 170 (184)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHH--------HHHHHHHT
T ss_pred HHHHHHHHHHHHhCCchhHHHHHHHHHHhcchhhhHHHHHHHHHHHCCCHHHHHH--------HHHHHHhC
Confidence 9999999999999999999999999999999999999999999999988765544 67777763
No 27
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.67 E-value=1.7e-15 Score=126.77 Aligned_cols=122 Identities=36% Similarity=0.519 Sum_probs=113.2
Q ss_pred cCChhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcCCCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH
Q psy4703 3 DNNMNDYNKLKESGNSAFKQGDYETALDFYTKALKVTAEESHERATCLKNRAAVYLKQNQNDKVIEDCSKSLEIVPDDPK 82 (401)
Q Consensus 3 ~~~p~~a~~l~~~Gn~~~~~g~y~eAi~~y~~Al~l~~p~~~~~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~ldP~~~k 82 (401)
..+|..+..++..|..++..|+|++|+.+|+++++++ |+.+....++.++|.+|+.+|+|++|+.+|+++++++|+++.
T Consensus 22 ~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~-~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~ 100 (148)
T 2dba_A 22 TPGASSVEQLRKEGNELFKCGDYGGALAAYTQALGLD-ATPQDQAVLHRNRAACHLKLEDYDKAETEASKAIEKDGGDVK 100 (148)
T ss_dssp CTTCCCHHHHHHHHHHHHTTTCHHHHHHHHHHHHTSC-CCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSCCHH
T ss_pred ccchHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHc-ccchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCccCHH
Confidence 4567889999999999999999999999999999999 763334899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCccHHHHHHHHH
Q psy4703 83 ALFRRCQAYEAIGKFEEAYTDAKHIHRVEPTNKAIQPVLSRLF 125 (401)
Q Consensus 83 A~~~~a~a~~~lg~~eeA~~~~~kal~l~P~~~~~~~~L~~l~ 125 (401)
+++.+|.++..+|++++|+..|+++++++|++..++..+.++.
T Consensus 101 ~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 143 (148)
T 2dba_A 101 ALYRRSQALEKLGRLDQAVLDLQRCVSLEPKNKVFQEALRNIS 143 (148)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHH
Confidence 9999999999999999999999999999999998888776654
No 28
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=99.67 E-value=3.7e-16 Score=167.96 Aligned_cols=133 Identities=14% Similarity=0.160 Sum_probs=126.9
Q ss_pred ccCChhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcCCCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH
Q psy4703 2 IDNNMNDYNKLKESGNSAFKQGDYETALDFYTKALKVTAEESHERATCLKNRAAVYLKQNQNDKVIEDCSKSLEIVPDDP 81 (401)
Q Consensus 2 i~~~p~~a~~l~~~Gn~~~~~g~y~eAi~~y~~Al~l~~p~~~~~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~ldP~~~ 81 (401)
|+.+|+.+.++.++|+.+.+.|++++|+.+|++|++++ |+ ++.+|+++|.+|..+|++++|+.+|+++++++|+++
T Consensus 36 l~l~P~~~~a~~nLg~~l~~~g~~~eA~~~~~~Al~l~-P~---~~~a~~nLg~~l~~~g~~~~A~~~~~kAl~l~P~~~ 111 (723)
T 4gyw_A 36 LEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRIS-PT---FADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFA 111 (723)
T ss_dssp HHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TT---CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred HHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-CC---CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH
Confidence 56789999999999999999999999999999999999 77 899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCccHHHHHHHHHHHHHHHHHHHHHH
Q psy4703 82 KALFRRCQAYEAIGKFEEAYTDAKHIHRVEPTNKAIQPVLSRLFAIVTKRMQENEQL 138 (401)
Q Consensus 82 kA~~~~a~a~~~lg~~eeA~~~~~kal~l~P~~~~~~~~L~~l~~~~~~~~~a~~~~ 138 (401)
.+|+++|.+|..+|++++|+..|+++++++|++..++..++.++..+++..++...+
T Consensus 112 ~a~~~Lg~~~~~~g~~~eAi~~~~~Al~l~P~~~~a~~~L~~~l~~~g~~~~A~~~~ 168 (723)
T 4gyw_A 112 DAHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLAHCLQIVCDWTDYDERM 168 (723)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCCTTHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHhhhhhHHHhcccHHHHHHHH
Confidence 999999999999999999999999999999999999999999999988877766644
No 29
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=99.67 E-value=3.1e-15 Score=121.61 Aligned_cols=123 Identities=27% Similarity=0.387 Sum_probs=115.5
Q ss_pred cCChhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcCCCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH
Q psy4703 3 DNNMNDYNKLKESGNSAFKQGDYETALDFYTKALKVTAEESHERATCLKNRAAVYLKQNQNDKVIEDCSKSLEIVPDDPK 82 (401)
Q Consensus 3 ~~~p~~a~~l~~~Gn~~~~~g~y~eAi~~y~~Al~l~~p~~~~~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~ldP~~~k 82 (401)
+.+|..+..+...|..++..|+|++|+.+|.+++... |+ ...++.++|.+|...|++++|+..+.++++.+|+++.
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~-~~---~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~ 81 (131)
T 2vyi_A 6 EEDSAEAERLKTEGNEQMKVENFEAAVHFYGKAIELN-PA---NAVYFCNRAAAYSKLGNYAGAVQDCERAICIDPAYSK 81 (131)
T ss_dssp -CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TT---CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH
T ss_pred hcchhhhHHHHHHHHHHHHccCHHHHHHHHHHHHHcC-CC---CHHHHHHHHHHHHHhhchHHHHHHHHHHHhcCccCHH
Confidence 4678899999999999999999999999999999999 76 7889999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCccHHHHHHHHHHHHH
Q psy4703 83 ALFRRCQAYEAIGKFEEAYTDAKHIHRVEPTNKAIQPVLSRLFAIVT 129 (401)
Q Consensus 83 A~~~~a~a~~~lg~~eeA~~~~~kal~l~P~~~~~~~~L~~l~~~~~ 129 (401)
+++.+|.++..+|++++|+..|+++++++|++..++..++.++..++
T Consensus 82 ~~~~~~~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~~~ 128 (131)
T 2vyi_A 82 AYGRMGLALSSLNKHVEAVAYYKKALELDPDNETYKSNLKIAELKLR 128 (131)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHhcCccchHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999998888888776554
No 30
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=99.66 E-value=2.2e-15 Score=136.81 Aligned_cols=126 Identities=20% Similarity=0.256 Sum_probs=117.5
Q ss_pred ccCCh-hHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcCCCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Q psy4703 2 IDNNM-NDYNKLKESGNSAFKQGDYETALDFYTKALKVTAEESHERATCLKNRAAVYLKQNQNDKVIEDCSKSLEIVPDD 80 (401)
Q Consensus 2 i~~~p-~~a~~l~~~Gn~~~~~g~y~eAi~~y~~Al~l~~p~~~~~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~ldP~~ 80 (401)
++.+| .+...+...|..++..|+|++|+.+|+++++++ |+ +..++.++|.+|..+|+|++|+..++++++++|++
T Consensus 34 l~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~-p~---~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~ 109 (228)
T 4i17_A 34 LKLTNNQDSVTAYNCGVCADNIKKYKEAADYFDIAIKKN-YN---LANAYIGKSAAYRDMKNNQEYIATLTEGIKAVPGN 109 (228)
T ss_dssp HHHTTTCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTT-CS---HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTC
T ss_pred HhccCCCCcHHHHHHHHHHHHhhcHHHHHHHHHHHHHhC-cc---hHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCc
Confidence 34456 677888899999999999999999999999999 76 89999999999999999999999999999999999
Q ss_pred H-------HHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC--CccHHHHHHHHHHHHHHH
Q psy4703 81 P-------KALFRRCQAYEAIGKFEEAYTDAKHIHRVEPT--NKAIQPVLSRLFAIVTKR 131 (401)
Q Consensus 81 ~-------kA~~~~a~a~~~lg~~eeA~~~~~kal~l~P~--~~~~~~~L~~l~~~~~~~ 131 (401)
+ .+|+.+|.++..+|++++|+..|+++++++|+ +..++..++.++...+..
T Consensus 110 ~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~l~~~~~~~~~~ 169 (228)
T 4i17_A 110 ATIEKLYAIYYLKEGQKFQQAGNIEKAEENYKHATDVTSKKWKTDALYSLGVLFYNNGAD 169 (228)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhHHHHHhccHHHHHHHHHHHHhcCCCcccHHHHHHHHHHHHHHHHH
Confidence 9 77999999999999999999999999999999 999999999998877765
No 31
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=99.66 E-value=6.7e-16 Score=153.22 Aligned_cols=127 Identities=29% Similarity=0.513 Sum_probs=117.4
Q ss_pred hhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHh----------------hcCCCCcchHHHHHHHHHHHHHcCCHHHHHHH
Q psy4703 6 MNDYNKLKESGNSAFKQGDYETALDFYTKALK----------------VTAEESHERATCLKNRAAVYLKQNQNDKVIED 69 (401)
Q Consensus 6 p~~a~~l~~~Gn~~~~~g~y~eAi~~y~~Al~----------------l~~p~~~~~~~~~~n~a~~y~klg~y~~Ai~~ 69 (401)
...+..++..|+.+++.|+|++|+.+|+++++ ++ +....+|.++|.||+++|+|++|+.+
T Consensus 220 ~~~a~~~~~~g~~~~~~g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~----~~~~~~~~nla~~~~~~g~~~~A~~~ 295 (370)
T 1ihg_A 220 LLISEDLKNIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQ----PVALSCVLNIGACKLKMSDWQGAVDS 295 (370)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGH----HHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhcCccccChHHHHHHH----HHHHHHHHHHHHHHHhccCHHHHHHH
Confidence 34577899999999999999999999999999 45 34889999999999999999999999
Q ss_pred HHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCccHHHHHHHHHHHHHHHHHHHH
Q psy4703 70 CSKSLEIVPDDPKALFRRCQAYEAIGKFEEAYTDAKHIHRVEPTNKAIQPVLSRLFAIVTKRMQENE 136 (401)
Q Consensus 70 ~~kAL~ldP~~~kA~~~~a~a~~~lg~~eeA~~~~~kal~l~P~~~~~~~~L~~l~~~~~~~~~a~~ 136 (401)
|+++|+++|+++++++++|.+|..+|+|++|+.+|+++++++|++..++..++.+...+++..++.+
T Consensus 296 ~~~al~~~p~~~~a~~~lg~~~~~~g~~~eA~~~l~~Al~l~P~~~~~~~~l~~~~~~~~~~~~a~k 362 (370)
T 1ihg_A 296 CLEALEIDPSNTKALYRRAQGWQGLKEYDQALADLKKAQEIAPEDKAIQAELLKVKQKIKAQKDKEK 362 (370)
T ss_dssp HHHHHTTCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCchhHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999888877665544
No 32
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=99.65 E-value=6.3e-15 Score=117.75 Aligned_cols=115 Identities=30% Similarity=0.443 Sum_probs=109.0
Q ss_pred hHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcCCCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHH
Q psy4703 7 NDYNKLKESGNSAFKQGDYETALDFYTKALKVTAEESHERATCLKNRAAVYLKQNQNDKVIEDCSKSLEIVPDDPKALFR 86 (401)
Q Consensus 7 ~~a~~l~~~Gn~~~~~g~y~eAi~~y~~Al~l~~p~~~~~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~ldP~~~kA~~~ 86 (401)
+.+..+...|..++..|+|++|+.+|++++..+ |+ +..++.++|.+|..+|+|++|+..++++++.+|.++.+++.
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~-~~---~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~ 77 (118)
T 1elw_A 2 EQVNELKEKGNKALSVGNIDDALQCYSEAIKLD-PH---NHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWGKGYSR 77 (118)
T ss_dssp CHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TT---CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred chHHHHHHHHHHHHHcccHHHHHHHHHHHHHHC-CC---cHHHHHHHHHHHHhhccHHHHHHHHHHHHHhCcccHHHHHH
Confidence 457889999999999999999999999999999 76 78899999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHhhCCCCccHHHHHHHHH
Q psy4703 87 RCQAYEAIGKFEEAYTDAKHIHRVEPTNKAIQPVLSRLF 125 (401)
Q Consensus 87 ~a~a~~~lg~~eeA~~~~~kal~l~P~~~~~~~~L~~l~ 125 (401)
+|.++..+|++++|+..|+++++++|+++.++..++.+.
T Consensus 78 ~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~ 116 (118)
T 1elw_A 78 KAAALEFLNRFEEAKRTYEEGLKHEANNPQLKEGLQNME 116 (118)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHcCCCCHHHHHHHHHhh
Confidence 999999999999999999999999999998888877664
No 33
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=99.65 E-value=2.3e-15 Score=123.47 Aligned_cols=121 Identities=26% Similarity=0.365 Sum_probs=114.2
Q ss_pred CChhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcCCCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHH
Q psy4703 4 NNMNDYNKLKESGNSAFKQGDYETALDFYTKALKVTAEESHERATCLKNRAAVYLKQNQNDKVIEDCSKSLEIVPDDPKA 83 (401)
Q Consensus 4 ~~p~~a~~l~~~Gn~~~~~g~y~eAi~~y~~Al~l~~p~~~~~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~ldP~~~kA 83 (401)
..|....+++..|..++..|+|++|+.+|+++++.+ |+ +..+++++|.+|+..|++++|+..++++++++|.++.+
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~-~~---~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~ 86 (133)
T 2lni_A 11 MNPDLALMVKNKGNECFQKGDYPQAMKHYTEAIKRN-PK---DAKLYSNRAACYTKLLEFQLALKDCEECIQLEPTFIKG 86 (133)
T ss_dssp SSSCHHHHHHHHHHHHHHTTCSHHHHHHHHHHHTTC-TT---CHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHCTTCHHH
T ss_pred cCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcC-CC---cHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCchHH
Confidence 467889999999999999999999999999999999 76 78999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCccHHHHHHHHHHHH
Q psy4703 84 LFRRCQAYEAIGKFEEAYTDAKHIHRVEPTNKAIQPVLSRLFAIV 128 (401)
Q Consensus 84 ~~~~a~a~~~lg~~eeA~~~~~kal~l~P~~~~~~~~L~~l~~~~ 128 (401)
++.+|.++..+|++++|+..|+++++++|++..++..++.++...
T Consensus 87 ~~~la~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~~ 131 (133)
T 2lni_A 87 YTRKAAALEAMKDYTKAMDVYQKALDLDSSCKEAADGYQRCMMAQ 131 (133)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCGGGTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999888888776543
No 34
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=99.64 E-value=2.6e-14 Score=121.81 Aligned_cols=126 Identities=25% Similarity=0.401 Sum_probs=113.0
Q ss_pred hHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcCCCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHH
Q psy4703 7 NDYNKLKESGNSAFKQGDYETALDFYTKALKVTAEESHERATCLKNRAAVYLKQNQNDKVIEDCSKSLEIVPDDPKALFR 86 (401)
Q Consensus 7 ~~a~~l~~~Gn~~~~~g~y~eAi~~y~~Al~l~~p~~~~~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~ldP~~~kA~~~ 86 (401)
..+..+...|..++..|+|++|+.+|.++++.+ |+ +..++.++|.++..+|+|++|+..+.++++++|.++.+++.
T Consensus 11 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~-~~---~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~ 86 (166)
T 1a17_A 11 KRAEELKTQANDYFKAKDYENAIKFYSQAIELN-PS---NAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYR 86 (166)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS-TT---CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred HHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhC-CC---ChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcccHHHHHH
Confidence 568889999999999999999999999999999 76 78999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHhhCCCCccHHHHHHHH--HHHHHHHHHHHH
Q psy4703 87 RCQAYEAIGKFEEAYTDAKHIHRVEPTNKAIQPVLSRL--FAIVTKRMQENE 136 (401)
Q Consensus 87 ~a~a~~~lg~~eeA~~~~~kal~l~P~~~~~~~~L~~l--~~~~~~~~~a~~ 136 (401)
+|.++..+|++++|+..|+++++++|++..+...++.+ ....++..++..
T Consensus 87 ~a~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~~~~~~~~~~~~~~A~~ 138 (166)
T 1a17_A 87 RAASNMALGKFRAALRDYETVVKVKPHDKDAKMKYQECNKIVKQKAFERAIA 138 (166)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999888666655 334444444333
No 35
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=99.64 E-value=1.8e-16 Score=155.07 Aligned_cols=139 Identities=29% Similarity=0.432 Sum_probs=96.6
Q ss_pred CChhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcCCCCcchH-----------------HHHHHHHHHHHHcCCHHHH
Q psy4703 4 NNMNDYNKLKESGNSAFKQGDYETALDFYTKALKVTAEESHERA-----------------TCLKNRAAVYLKQNQNDKV 66 (401)
Q Consensus 4 ~~p~~a~~l~~~Gn~~~~~g~y~eAi~~y~~Al~l~~p~~~~~~-----------------~~~~n~a~~y~klg~y~~A 66 (401)
..++.+..++..|+.+++.|+|++|+.+|.+++.+. |+ +. .+|+|+|.||+++|+|++|
T Consensus 174 ~~~~~a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~-p~---~~~~~~~~~~~~~~~~l~~~~~~nla~~~~~~g~~~~A 249 (338)
T 2if4_A 174 ERIGAADRRKMDGNSLFKEEKLEEAMQQYEMAIAYM-GD---DFMFQLYGKYQDMALAVKNPCHLNIAACLIKLKRYDEA 249 (338)
T ss_dssp HHHHHHHHHHHHHHHTCSSSCCHHHHHHHHHHHHHS-CH---HHHHTCCHHHHHHHHHHHTHHHHHHHHHHHTTTCCHHH
T ss_pred HHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHh-cc---chhhhhcccHHHHHHHHHHHHHHHHHHHHHHcCCHHHH
Confidence 346788999999999999999999999999999999 65 43 4899999999999999999
Q ss_pred HHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy4703 67 IEDCSKSLEIVPDDPKALFRRCQAYEAIGKFEEAYTDAKHIHRVEPTNKAIQPVLSRLFAIVTKRMQENEQLQNKVHNMF 146 (401)
Q Consensus 67 i~~~~kAL~ldP~~~kA~~~~a~a~~~lg~~eeA~~~~~kal~l~P~~~~~~~~L~~l~~~~~~~~~a~~~~~~~~~~~~ 146 (401)
+.+|+++|+++|+++++|+++|.+|..+|+|++|+.+|+++++++|+++.++..+..+........ .....+|
T Consensus 250 ~~~~~~al~~~p~~~~a~~~lg~a~~~~g~~~~A~~~l~~al~l~p~~~~a~~~L~~l~~~~~~~~-------~~a~~~~ 322 (338)
T 2if4_A 250 IGHCNIVLTEEEKNPKALFRRGKAKAELGQMDSARDDFRKAQKYAPDDKAIRRELRALAEQEKALY-------QKQKEMY 322 (338)
T ss_dssp HHHHHHHHHHCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHTTC-------------------------------------
T ss_pred HHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH-------HHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999888755443332 2334467
Q ss_pred HHhhcCC
Q psy4703 147 KYVFDTS 153 (401)
Q Consensus 147 ~~~~~~~ 153 (401)
+.++...
T Consensus 323 ~~~l~~~ 329 (338)
T 2if4_A 323 KGIFKGK 329 (338)
T ss_dssp -------
T ss_pred HHhhCCC
Confidence 7777633
No 36
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.64 E-value=4e-13 Score=133.19 Aligned_cols=173 Identities=17% Similarity=0.189 Sum_probs=139.5
Q ss_pred ccCChhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcCCCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH
Q psy4703 2 IDNNMNDYNKLKESGNSAFKQGDYETALDFYTKALKVTAEESHERATCLKNRAAVYLKQNQNDKVIEDCSKSLEIVPDDP 81 (401)
Q Consensus 2 i~~~p~~a~~l~~~Gn~~~~~g~y~eAi~~y~~Al~l~~p~~~~~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~ldP~~~ 81 (401)
+..+|.++..+...|..++..|+|++|+..|+++++.+ |+ +..+++++|.+|+.+|++++|+..|+++++++|+++
T Consensus 19 ~~~~p~~~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~~-p~---~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~ 94 (450)
T 2y4t_A 19 YFQSMADVEKHLELGKKLLAAGQLADALSQFHAAVDGD-PD---NYIAYYRRATVFLAMGKSKAALPDLTKVIQLKMDFT 94 (450)
T ss_dssp ----CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TT---CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred ccccHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhC-Cc---cHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcH
Confidence 56789999999999999999999999999999999999 76 799999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCc---cHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHhhc-CC
Q psy4703 82 KALFRRCQAYEAIGKFEEAYTDAKHIHRVEPTNK---AIQPVLSRLFAIVTKRMQENEQ----LQNKVHNMFKYVFD-TS 153 (401)
Q Consensus 82 kA~~~~a~a~~~lg~~eeA~~~~~kal~l~P~~~---~~~~~L~~l~~~~~~~~~a~~~----~~~~~~~~~~~~~~-~~ 153 (401)
.+++.+|.+|..+|++++|+..|+++++++|++. .++..+..+.........+... ....+..+|+.+.. .|
T Consensus 95 ~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~ 174 (450)
T 2y4t_A 95 AARLQRGHLLLKQGKLDEAEDDFKKVLKSNPSENEEKEAQSQLIKSDEMQRLRSQALNAFGSGDYTAAIAFLDKILEVCV 174 (450)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC
Confidence 9999999999999999999999999999999998 7777775553332222221110 01345557777776 56
Q ss_pred CChhHHHHHHHHHHHhhhcchhhHH
Q psy4703 154 APMDKRVTAVNNLVVLAREMSGAEM 178 (401)
Q Consensus 154 ~~~~~~~~a~~~L~~l~~~~~gae~ 178 (401)
.+.......+..+...++.+.+.+.
T Consensus 175 ~~~~~~~~l~~~~~~~g~~~~A~~~ 199 (450)
T 2y4t_A 175 WDAELRELRAECFIKEGEPRKAISD 199 (450)
T ss_dssp TCHHHHHHHHHHHHHTTCGGGGHHH
T ss_pred CChHHHHHHHHHHHHCCCHHHHHHH
Confidence 6677777777778888886554433
No 37
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=99.63 E-value=1.1e-14 Score=135.41 Aligned_cols=118 Identities=14% Similarity=0.188 Sum_probs=107.9
Q ss_pred cCChhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcCCCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC--
Q psy4703 3 DNNMNDYNKLKESGNSAFKQGDYETALDFYTKALKVTAEESHERATCLKNRAAVYLKQNQNDKVIEDCSKSLEIVPDD-- 80 (401)
Q Consensus 3 ~~~p~~a~~l~~~Gn~~~~~g~y~eAi~~y~~Al~l~~p~~~~~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~ldP~~-- 80 (401)
..+|.++..++..|..++..|+|++|+..|+++++.. |+.+....+++++|.+|+++|+|++|+..|+++++++|++
T Consensus 9 ~~~~~~~~~~~~~a~~~~~~g~~~~A~~~~~~~l~~~-p~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~p~~~~ 87 (261)
T 3qky_A 9 RLRHSSPQEAFERAMEFYNQGKYDRAIEYFKAVFTYG-RTHEWAADAQFYLARAYYQNKEYLLAASEYERFIQIYQIDPR 87 (261)
T ss_dssp --CCSSHHHHHHHHHHHHHTTCHHHHHHHHHHHGGGC-SCSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTT
T ss_pred CCCCCCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhC-CCCcchHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHCCCCch
Confidence 4567889999999999999999999999999999999 8756669999999999999999999999999999998854
Q ss_pred -HHHHHHHHHHHHH--------cCCHHHHHHHHHHHHhhCCCCccHHHHH
Q psy4703 81 -PKALFRRCQAYEA--------IGKFEEAYTDAKHIHRVEPTNKAIQPVL 121 (401)
Q Consensus 81 -~kA~~~~a~a~~~--------lg~~eeA~~~~~kal~l~P~~~~~~~~L 121 (401)
+.+++.+|.++.. +|++++|+..|+++++.+|+++.+...+
T Consensus 88 ~~~a~~~lg~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~ 137 (261)
T 3qky_A 88 VPQAEYERAMCYYKLSPPYELDQTDTRKAIEAFQLFIDRYPNHELVDDAT 137 (261)
T ss_dssp HHHHHHHHHHHHHHHCCCTTSCCHHHHHHHHHHHHHHHHCTTCTTHHHHH
T ss_pred hHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHCcCchhHHHHH
Confidence 7799999999999 9999999999999999999998877443
No 38
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=99.62 E-value=2.9e-14 Score=129.05 Aligned_cols=124 Identities=15% Similarity=0.120 Sum_probs=65.9
Q ss_pred CChhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcCCCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHH
Q psy4703 4 NNMNDYNKLKESGNSAFKQGDYETALDFYTKALKVTAEESHERATCLKNRAAVYLKQNQNDKVIEDCSKSLEIVPDDPKA 83 (401)
Q Consensus 4 ~~p~~a~~l~~~Gn~~~~~g~y~eAi~~y~~Al~l~~p~~~~~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~ldP~~~kA 83 (401)
.+|.+...+...|..++..|++++|+.+|.++++.+ |+ ...++.++|.+|..+|++++|+..++++++.+|.++.+
T Consensus 52 ~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~-~~---~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~ 127 (243)
T 2q7f_A 52 ENKEDAIPYINFANLLSSVNELERALAFYDKALELD-SS---AATAYYGAGNVYVVKEMYKEAKDMFEKALRAGMENGDL 127 (243)
T ss_dssp TCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TT---CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTCCSHHH
T ss_pred hCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcC-Cc---chHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCHHH
Confidence 344445555555555555555555555555555555 43 44555555555555555555555555555555555555
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCccHHHHHHHHHHHHHHH
Q psy4703 84 LFRRCQAYEAIGKFEEAYTDAKHIHRVEPTNKAIQPVLSRLFAIVTKR 131 (401)
Q Consensus 84 ~~~~a~a~~~lg~~eeA~~~~~kal~l~P~~~~~~~~L~~l~~~~~~~ 131 (401)
++.+|.++..+|++++|+..|+++++++|++..+...++.++...++.
T Consensus 128 ~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 175 (243)
T 2q7f_A 128 FYMLGTVLVKLEQPKLALPYLQRAVELNENDTEARFQFGMCLANEGML 175 (243)
T ss_dssp HHHHHHHHHHTSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHcCCH
Confidence 555555555555555555555555555555555555555554444443
No 39
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=99.62 E-value=1.3e-14 Score=134.84 Aligned_cols=153 Identities=12% Similarity=0.166 Sum_probs=125.9
Q ss_pred ccCChhH---HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcCCCCcchHHHHHHHHHHHHH--------cCCHHHHHHHH
Q psy4703 2 IDNNMND---YNKLKESGNSAFKQGDYETALDFYTKALKVTAEESHERATCLKNRAAVYLK--------QNQNDKVIEDC 70 (401)
Q Consensus 2 i~~~p~~---a~~l~~~Gn~~~~~g~y~eAi~~y~~Al~l~~p~~~~~~~~~~n~a~~y~k--------lg~y~~Ai~~~ 70 (401)
++.+|.+ +.+++..|..++..|+|++|+..|++++++. |+++....+++++|.+|+. +|++++|+..|
T Consensus 42 l~~~p~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~-p~~~~~~~a~~~lg~~~~~~~~~~~~~~~~~~~A~~~~ 120 (261)
T 3qky_A 42 FTYGRTHEWAADAQFYLARAYYQNKEYLLAASEYERFIQIY-QIDPRVPQAEYERAMCYYKLSPPYELDQTDTRKAIEAF 120 (261)
T ss_dssp GGGCSCSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCTTHHHHHHHHHHHHHHHCCCTTSCCHHHHHHHHHH
T ss_pred HHhCCCCcchHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHC-CCCchhHHHHHHHHHHHHHhcccccccchhHHHHHHHH
Confidence 4566777 8999999999999999999999999999999 8767789999999999999 99999999999
Q ss_pred HHHHHhCCCCHHHH-----------------HHHHHHHHHcCCHHHHHHHHHHHHhhCCCCc---cHHHHHHHHHHHHHH
Q psy4703 71 SKSLEIVPDDPKAL-----------------FRRCQAYEAIGKFEEAYTDAKHIHRVEPTNK---AIQPVLSRLFAIVTK 130 (401)
Q Consensus 71 ~kAL~ldP~~~kA~-----------------~~~a~a~~~lg~~eeA~~~~~kal~l~P~~~---~~~~~L~~l~~~~~~ 130 (401)
+++++.+|++..+. +.+|.+|..+|+|++|+..|+++++.+|+++ .++..++.++..++.
T Consensus 121 ~~~l~~~p~~~~~~~a~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~a~~~l~~~~~~~g~ 200 (261)
T 3qky_A 121 QLFIDRYPNHELVDDATQKIRELRAKLARKQYEAARLYERRELYEAAAVTYEAVFDAYPDTPWADDALVGAMRAYIAYAE 200 (261)
T ss_dssp HHHHHHCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHCcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCCchHHHHHHHHHHHHHHhcc
Confidence 99999999986665 8999999999999999999999999999854 567777777776632
Q ss_pred HHH---HHHHHHHHHHHHHHHhhcCCCCh
Q psy4703 131 RMQ---ENEQLQNKVHNMFKYVFDTSAPM 156 (401)
Q Consensus 131 ~~~---a~~~~~~~~~~~~~~~~~~~~~~ 156 (401)
... ....+ ..+..+|+.+....++.
T Consensus 201 ~~~~~~~~~~~-~~A~~~~~~~~~~~p~~ 228 (261)
T 3qky_A 201 QSVRARQPERY-RRAVELYERLLQIFPDS 228 (261)
T ss_dssp TSCGGGHHHHH-HHHHHHHHHHHHHCTTC
T ss_pred cchhhcccchH-HHHHHHHHHHHHHCCCC
Confidence 210 00011 33555788887733333
No 40
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=99.62 E-value=1e-14 Score=119.90 Aligned_cols=117 Identities=16% Similarity=0.162 Sum_probs=107.2
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhhcCCCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC---HHHHHH
Q psy4703 10 NKLKESGNSAFKQGDYETALDFYTKALKVTAEESHERATCLKNRAAVYLKQNQNDKVIEDCSKSLEIVPDD---PKALFR 86 (401)
Q Consensus 10 ~~l~~~Gn~~~~~g~y~eAi~~y~~Al~l~~p~~~~~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~ldP~~---~kA~~~ 86 (401)
+.++..|..++..|+|++|+..|.++++.. |+.+....+++++|.+|+.+|+|++|+..|++++..+|++ +.+++.
T Consensus 3 ~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~-p~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~ 81 (129)
T 2xev_A 3 RTAYNVAFDALKNGKYDDASQLFLSFLELY-PNGVYTPNALYWLGESYYATRNFQLAEAQFRDLVSRYPTHDKAAGGLLK 81 (129)
T ss_dssp CCHHHHHHHHHHTTCHHHHHHHHHHHHHHC-SSSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTSTTHHHHHHH
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHC-CCCcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHHCCCCcccHHHHHH
Confidence 457889999999999999999999999999 8755566899999999999999999999999999999999 999999
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHhhCCCCccHHHHHHHHHHH
Q psy4703 87 RCQAYEAIGKFEEAYTDAKHIHRVEPTNKAIQPVLSRLFAI 127 (401)
Q Consensus 87 ~a~a~~~lg~~eeA~~~~~kal~l~P~~~~~~~~L~~l~~~ 127 (401)
+|.++..+|++++|+..|+++++.+|+++.+.....++...
T Consensus 82 la~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~a~~~l~~l 122 (129)
T 2xev_A 82 LGLSQYGEGKNTEAQQTLQQVATQYPGSDAARVAQERLQSI 122 (129)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHSTTSHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHHCCCChHHHHHHHHHHHH
Confidence 99999999999999999999999999998877766665543
No 41
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=99.62 E-value=5e-15 Score=123.94 Aligned_cols=116 Identities=11% Similarity=0.155 Sum_probs=100.5
Q ss_pred HHHhhcCCCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC
Q psy4703 34 KALKVTAEESHERATCLKNRAAVYLKQNQNDKVIEDCSKSLEIVPDDPKALFRRCQAYEAIGKFEEAYTDAKHIHRVEPT 113 (401)
Q Consensus 34 ~Al~l~~p~~~~~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~ldP~~~kA~~~~a~a~~~lg~~eeA~~~~~kal~l~P~ 113 (401)
++..++ |+ .+..+.++|.+|++.|+|++|+..|+++|+++|.++.+|+++|.+|..+|++++|+.+|+++++++|+
T Consensus 4 r~a~in-P~---~a~~~~~~G~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~ 79 (126)
T 4gco_A 4 RLAYIN-PE---LAQEEKNKGNEYFKKGDYPTAMRHYNEAVKRDPENAILYSNRAACLTKLMEFQRALDDCDTCIRLDSK 79 (126)
T ss_dssp ---CCC-HH---HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHC-HH---HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHhhHHHhhccHHHHHHHHHHHHHhhhh
Confidence 445567 54 99999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CCCChhHHHH
Q psy4703 114 NKAIQPVLSRLFAIVTKRMQENEQLQNKVHNMFKYVFD-TSAPMDKRVT 161 (401)
Q Consensus 114 ~~~~~~~L~~l~~~~~~~~~a~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 161 (401)
+..++..++.++..+++..++.. .|+.++. .|.+.+.+..
T Consensus 80 ~~~a~~~lg~~~~~~~~~~~A~~--------~~~~al~l~P~~~~a~~~ 120 (126)
T 4gco_A 80 FIKGYIRKAACLVAMREWSKAQR--------AYEDALQVDPSNEEAREG 120 (126)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHH--------HHHHHHHHCTTCHHHHHH
T ss_pred hhHHHHHHHHHHHHCCCHHHHHH--------HHHHHHHHCcCCHHHHHH
Confidence 99999999999999988855544 7888887 5555544433
No 42
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=99.62 E-value=3.2e-14 Score=139.20 Aligned_cols=161 Identities=16% Similarity=0.124 Sum_probs=123.8
Q ss_pred ccCChhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcCCCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH
Q psy4703 2 IDNNMNDYNKLKESGNSAFKQGDYETALDFYTKALKVTAEESHERATCLKNRAAVYLKQNQNDKVIEDCSKSLEIVPDDP 81 (401)
Q Consensus 2 i~~~p~~a~~l~~~Gn~~~~~g~y~eAi~~y~~Al~l~~p~~~~~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~ldP~~~ 81 (401)
++.+|+....+...|..+...|++++|+..|.++++.+ |+ ...+|.++|.+|...|++++|+..|+++++++|+++
T Consensus 128 l~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~-p~---~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~ 203 (388)
T 1w3b_A 128 LQYNPDLYCVRSDLGNLLKALGRLEEAKACYLKAIETQ-PN---FAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFL 203 (388)
T ss_dssp HHHCTTCTHHHHHHHHHHHTTSCHHHHHHHHHHHHHHC-TT---CHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCH
T ss_pred HHhCCCcHHHHHHHHHHHHHccCHHHHHHHHHHHHHhC-CC---CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcH
Confidence 34577778888888888888888888888888888888 65 777888888888888888888888888888888888
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CCCChhHHH
Q psy4703 82 KALFRRCQAYEAIGKFEEAYTDAKHIHRVEPTNKAIQPVLSRLFAIVTKRMQENEQLQNKVHNMFKYVFD-TSAPMDKRV 160 (401)
Q Consensus 82 kA~~~~a~a~~~lg~~eeA~~~~~kal~l~P~~~~~~~~L~~l~~~~~~~~~a~~~~~~~~~~~~~~~~~-~~~~~~~~~ 160 (401)
.+++.+|.++...|++++|+..|++++.++|++..++..++.++...++..++.. +|+.+.. .|.......
T Consensus 204 ~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~--------~~~~al~~~p~~~~~~~ 275 (388)
T 1w3b_A 204 DAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVHGNLACVYYEQGLIDLAID--------TYRRAIELQPHFPDAYC 275 (388)
T ss_dssp HHHHHHHHHHHTTTCTTHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHH--------HHHHHHHTCSSCHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcCCHHHHHHHHHHHHHcCCHHHHHH--------HHHHHHhhCCCCHHHHH
Confidence 8888888888888888888888888888888888888888888877777654433 5666666 344455555
Q ss_pred HHHHHHHHhhhcch
Q psy4703 161 TAVNNLVVLAREMS 174 (401)
Q Consensus 161 ~a~~~L~~l~~~~~ 174 (401)
.....+...++.++
T Consensus 276 ~l~~~~~~~g~~~~ 289 (388)
T 1w3b_A 276 NLANALKEKGSVAE 289 (388)
T ss_dssp HHHHHHHHHSCHHH
T ss_pred HHHHHHHHcCCHHH
Confidence 55556666666543
No 43
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=99.62 E-value=1.1e-14 Score=118.54 Aligned_cols=120 Identities=27% Similarity=0.342 Sum_probs=110.9
Q ss_pred hhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcCCCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC-----
Q psy4703 6 MNDYNKLKESGNSAFKQGDYETALDFYTKALKVTAEESHERATCLKNRAAVYLKQNQNDKVIEDCSKSLEIVPDD----- 80 (401)
Q Consensus 6 p~~a~~l~~~Gn~~~~~g~y~eAi~~y~~Al~l~~p~~~~~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~ldP~~----- 80 (401)
|+.+..+...|..++..|+|++|+.+|.+++..+ |. +..++.++|.+|...|+|++|+.+|++++.++|.+
T Consensus 1 ~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~-~~---~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~ 76 (131)
T 1elr_A 1 GKQALKEKELGNDAYKKKDFDTALKHYDKAKELD-PT---NMTYITNQAAVYFEKGDYNKCRELCEKAIEVGRENREDYR 76 (131)
T ss_dssp CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TT---CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSTTCHH
T ss_pred ChHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcC-Cc---cHHHHHHHHHHHHHhccHHHHHHHHHHHHhhccccchhHH
Confidence 4678899999999999999999999999999999 76 78999999999999999999999999999999877
Q ss_pred --HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCccHHHHHHHHHHHHHH
Q psy4703 81 --PKALFRRCQAYEAIGKFEEAYTDAKHIHRVEPTNKAIQPVLSRLFAIVTK 130 (401)
Q Consensus 81 --~kA~~~~a~a~~~lg~~eeA~~~~~kal~l~P~~~~~~~~L~~l~~~~~~ 130 (401)
+.+++++|.++..+|++++|+..|+++++++| ++.+...++.+...+++
T Consensus 77 ~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~ 127 (131)
T 1elr_A 77 QIAKAYARIGNSYFKEEKYKDAIHFYNKSLAEHR-TPDVLKKCQQAEKILKE 127 (131)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999 67888888777766554
No 44
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=99.61 E-value=4.5e-15 Score=123.26 Aligned_cols=104 Identities=12% Similarity=0.061 Sum_probs=93.7
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcCCCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHH
Q psy4703 9 YNKLKESGNSAFKQGDYETALDFYTKALKVTAEESHERATCLKNRAAVYLKQNQNDKVIEDCSKSLEIVPDDPKALFRRC 88 (401)
Q Consensus 9 a~~l~~~Gn~~~~~g~y~eAi~~y~~Al~l~~p~~~~~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~ldP~~~kA~~~~a 88 (401)
...++..|..++..|++++|+..|+++++++ |+ +..+|+++|.++..+|++++|+..|+++++++|+++.+++.+|
T Consensus 17 ~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~-P~---~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~~la 92 (121)
T 1hxi_A 17 HENPMEEGLSMLKLANLAEAALAFEAVCQKE-PE---REEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVHAALA 92 (121)
T ss_dssp CSCHHHHHHHHHHTTCHHHHHHHHHHHHHHS-TT---CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred chhHHHHHHHHHHcCCHHHHHHHHHHHHHHC-CC---CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHH
Confidence 3467899999999999999999999999999 77 8999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCHHHHHHHHHHHHhhCCCCcc
Q psy4703 89 QAYEAIGKFEEAYTDAKHIHRVEPTNKA 116 (401)
Q Consensus 89 ~a~~~lg~~eeA~~~~~kal~l~P~~~~ 116 (401)
.+|..+|++++|+..|+++++++|++..
T Consensus 93 ~~~~~~g~~~~A~~~~~~al~~~P~~~~ 120 (121)
T 1hxi_A 93 VSHTNEHNANAALASLRAWLLSQPQYEQ 120 (121)
T ss_dssp HHHHHHHHHHHHHHHHHHHHC-------
T ss_pred HHHHHcCCHHHHHHHHHHHHHhCcCCCC
Confidence 9999999999999999999999998754
No 45
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=99.61 E-value=2.1e-14 Score=136.42 Aligned_cols=106 Identities=26% Similarity=0.377 Sum_probs=102.1
Q ss_pred hhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcCCCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHH
Q psy4703 6 MNDYNKLKESGNSAFKQGDYETALDFYTKALKVTAEESHERATCLKNRAAVYLKQNQNDKVIEDCSKSLEIVPDDPKALF 85 (401)
Q Consensus 6 p~~a~~l~~~Gn~~~~~g~y~eAi~~y~~Al~l~~p~~~~~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~ldP~~~kA~~ 85 (401)
|..+..++..|+.++..|+|++|+.+|++++.++ |+ +..+++++|.+|+++|+|++|+.+|+++++++|+++.+++
T Consensus 1 p~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~-p~---~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~ 76 (281)
T 2c2l_A 1 SPSAQELKEQGNRLFVGRKYPEAAACYGRAITRN-PL---VAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHF 76 (281)
T ss_dssp CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-SC---CHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSCTTCHHHHH
T ss_pred ChhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-Cc---cHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHHHHH
Confidence 5678899999999999999999999999999999 76 8999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHhhCCCCc
Q psy4703 86 RRCQAYEAIGKFEEAYTDAKHIHRVEPTNK 115 (401)
Q Consensus 86 ~~a~a~~~lg~~eeA~~~~~kal~l~P~~~ 115 (401)
++|.+|..+|++++|+..|+++++++|+++
T Consensus 77 ~lg~~~~~~g~~~~A~~~~~~al~l~p~~~ 106 (281)
T 2c2l_A 77 FLGQCQLEMESYDEAIANLQRAYSLAKEQR 106 (281)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCccch
Confidence 999999999999999999999999999774
No 46
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=99.61 E-value=7.8e-13 Score=125.76 Aligned_cols=209 Identities=15% Similarity=0.175 Sum_probs=154.3
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcCCCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHH
Q psy4703 8 DYNKLKESGNSAFKQGDYETALDFYTKALKVTAEESHERATCLKNRAAVYLKQNQNDKVIEDCSKSLEIVPDDPKALFRR 87 (401)
Q Consensus 8 ~a~~l~~~Gn~~~~~g~y~eAi~~y~~Al~l~~p~~~~~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~ldP~~~kA~~~~ 87 (401)
+++.+...|+.++..|+|++|+.+|+++++.+ |+ +..+++++|.+|+.+|++++|+..|+++++++|+++.+++.+
T Consensus 2 ~~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~~-p~---~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l 77 (359)
T 3ieg_A 2 DVEKHLELGKKLLAAGQLADALSQFHAAVDGD-PD---NYIAYYRRATVFLAMGKSKAALPDLTKVIALKMDFTAARLQR 77 (359)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TT---CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhC-cc---cHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcchHHHHH
Confidence 57889999999999999999999999999999 76 789999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCHHHHHHHHHHHHhhCC---CCccHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHhhc-CCCChhHH
Q psy4703 88 CQAYEAIGKFEEAYTDAKHIHRVEP---TNKAIQPVLSRLFAIVTKRMQENEQ----LQNKVHNMFKYVFD-TSAPMDKR 159 (401)
Q Consensus 88 a~a~~~lg~~eeA~~~~~kal~l~P---~~~~~~~~L~~l~~~~~~~~~a~~~----~~~~~~~~~~~~~~-~~~~~~~~ 159 (401)
|.++..+|++++|+..|+++++++| ++..+...++.+.........+... ....+..+|+.+.. .|.+....
T Consensus 78 ~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~ 157 (359)
T 3ieg_A 78 GHLLLKQGKLDEAEDDFKKVLKSNPSEQEEKEAESQLVKADEMQRLRSQALDAFDGADYTAAITFLDKILEVCVWDAELR 157 (359)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHHHcCChHHHHHHHHHHHhcCCcccChHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCchHHH
Confidence 9999999999999999999999999 8888888775443332222211110 01345557777777 56666777
Q ss_pred HHHHHHHHHhhhcchhhHHHhhhhHHHHHHHHhhc-cCchhHHhhH--HHHHHHHHHhcHHHHHHHHcCCChh
Q psy4703 160 VTAVNNLVVLAREMSGAEMLLKSGVAKQINTLLKC-ETNEEIYLGE--EDFITSIIKQGVDILKRLYMSKNEN 229 (401)
Q Consensus 160 ~~a~~~L~~l~~~~~gae~~~~e~~v~~L~~ll~~-~~~~e~~lA~--e~fi~~i~~~gv~~Lk~l~~s~~d~ 229 (401)
...+..+...++.+.+. ..+.+.+.. ..+++..... -.+-.+..+.++..+.+.+...++.
T Consensus 158 ~~~~~~~~~~~~~~~A~---------~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~ 221 (359)
T 3ieg_A 158 ELRAECFIKEGEPRKAI---------SDLKAASKLKSDNTEAFYKISTLYYQLGDHELSLSEVRECLKLDQDH 221 (359)
T ss_dssp HHHHHHHHHTTCHHHHH---------HHHHHHHTTCSCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHCCCHHHHH---------HHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCccc
Confidence 77777777777754433 333333332 1233332111 1111334566677777777744443
No 47
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=99.61 E-value=5.1e-14 Score=132.92 Aligned_cols=217 Identities=9% Similarity=0.045 Sum_probs=160.5
Q ss_pred ccCChhHHHHHHHHHHHHHHcC-CHHHHHHHHHHHHhhcCCCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Q psy4703 2 IDNNMNDYNKLKESGNSAFKQG-DYETALDFYTKALKVTAEESHERATCLKNRAAVYLKQNQNDKVIEDCSKSLEIVPDD 80 (401)
Q Consensus 2 i~~~p~~a~~l~~~Gn~~~~~g-~y~eAi~~y~~Al~l~~p~~~~~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~ldP~~ 80 (401)
++.+|.++..+...|..++..| ++++|+.+|.++++++ |+ ...++.++|.+|...|++++|+..++++++++|++
T Consensus 83 ~~~~~~~~~~~~~l~~~~~~~~~~~~~A~~~~~~a~~~~-~~---~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~ 158 (330)
T 3hym_B 83 VDLYPSNPVSWFAVGCYYLMVGHKNEHARRYLSKATTLE-KT---YGPAWIAYGHSFAVESEHDQAMAAYFTAAQLMKGC 158 (330)
T ss_dssp HHHCTTSTHHHHHHHHHHHHSCSCHHHHHHHHHHHHTTC-TT---CTHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTTC
T ss_pred HHhCcCCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhC-Cc---cHHHHHHHHHHHHHccCHHHHHHHHHHHHHhcccc
Confidence 3457888889999999999999 9999999999999999 76 77889999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC--------
Q psy4703 81 PKALFRRCQAYEAIGKFEEAYTDAKHIHRVEPTNKAIQPVLSRLFAIVTKRMQENEQLQNKVHNMFKYVFDT-------- 152 (401)
Q Consensus 81 ~kA~~~~a~a~~~lg~~eeA~~~~~kal~l~P~~~~~~~~L~~l~~~~~~~~~a~~~~~~~~~~~~~~~~~~-------- 152 (401)
..+++.+|.++..+|++++|+..|+++++++|++..++..++.++...++..++.. +|+.+...
T Consensus 159 ~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~~~~~A~~--------~~~~a~~~~~~~~~~~ 230 (330)
T 3hym_B 159 HLPMLYIGLEYGLTNNSKLAERFFSQALSIAPEDPFVMHEVGVVAFQNGEWKTAEK--------WFLDALEKIKAIGNEV 230 (330)
T ss_dssp SHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHTTCHHHHHH--------HHHHHHHHHTTTSCSC
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHcccHHHHHH--------HHHHHHHHhhhccccc
Confidence 99999999999999999999999999999999999999999999888887766555 34444331
Q ss_pred --CCChhHHHHHHHHHHHhhhcchhhHHHhhhhHHHHHHHHhhc-cCchhHHhh--HHHHHHHHHHhcHHHHHHHHcCCC
Q psy4703 153 --SAPMDKRVTAVNNLVVLAREMSGAEMLLKSGVAKQINTLLKC-ETNEEIYLG--EEDFITSIIKQGVDILKRLYMSKN 227 (401)
Q Consensus 153 --~~~~~~~~~a~~~L~~l~~~~~gae~~~~e~~v~~L~~ll~~-~~~~e~~lA--~e~fi~~i~~~gv~~Lk~l~~s~~ 227 (401)
+.........+..+...++.+.+.+. +.+.++. ..+++.... .-.+-.+..+.+...+.+.+...+
T Consensus 231 ~~~~~~~~~~~la~~~~~~g~~~~A~~~---------~~~a~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p 301 (330)
T 3hym_B 231 TVDKWEPLLNNLGHVCRKLKKYAEALDY---------HRQALVLIPQNASTYSAIGYIHSLMGNFENAVDYFHTALGLRR 301 (330)
T ss_dssp TTTTCCHHHHHHHHHHHHTTCHHHHHHH---------HHHHHHHSTTCSHHHHHHHHHHHHHTCHHHHHHHHHTTTTTCS
T ss_pred cccHHHHHHHHHHHHHHHhcCHHHHHHH---------HHHHHhhCccchHHHHHHHHHHHHhccHHHHHHHHHHHHccCC
Confidence 33345556666666676765433332 2333321 123333211 111124446677788888887655
Q ss_pred hhHHHHHHHhhh
Q psy4703 228 ENIRVRALVGLC 239 (401)
Q Consensus 228 d~i~~ralvgLc 239 (401)
+....+...+.|
T Consensus 302 ~~~~~~~~l~~~ 313 (330)
T 3hym_B 302 DDTFSVTMLGHC 313 (330)
T ss_dssp CCHHHHHHHHHH
T ss_pred CchHHHHHHHHH
Confidence 555554444444
No 48
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=99.60 E-value=3.6e-14 Score=131.06 Aligned_cols=160 Identities=9% Similarity=0.045 Sum_probs=122.2
Q ss_pred ccCChhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcCCCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH
Q psy4703 2 IDNNMNDYNKLKESGNSAFKQGDYETALDFYTKALKVTAEESHERATCLKNRAAVYLKQNQNDKVIEDCSKSLEIVPDDP 81 (401)
Q Consensus 2 i~~~p~~a~~l~~~Gn~~~~~g~y~eAi~~y~~Al~l~~p~~~~~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~ldP~~~ 81 (401)
++.+|+++..+...|..++..|+|++|+.+|.++++.. ++......+|.++|.+|..+|++++|+..|+++++++|.++
T Consensus 30 l~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~-~~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~a~~~~~~~~ 108 (272)
T 3u4t_A 30 EAKKYNSPYIYNRRAVCYYELAKYDLAQKDIETYFSKV-NATKAKSADFEYYGKILMKKGQDSLAIQQYQAAVDRDTTRL 108 (272)
T ss_dssp HHTTCCCSTTHHHHHHHHHHTTCHHHHHHHHHHHHTTS-CTTTCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCT
T ss_pred HHhCCCcHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcc-CchhHHHHHHHHHHHHHHHcccHHHHHHHHHHHHhcCcccH
Confidence 45677777788888888888888888888888888833 33333467788889999999999999999999999999888
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCccHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CCCChhHH
Q psy4703 82 KALFRRCQAYEAIGKFEEAYTDAKHIHRVEPTNKAIQPVLS-RLFAIVTKRMQENEQLQNKVHNMFKYVFD-TSAPMDKR 159 (401)
Q Consensus 82 kA~~~~a~a~~~lg~~eeA~~~~~kal~l~P~~~~~~~~L~-~l~~~~~~~~~a~~~~~~~~~~~~~~~~~-~~~~~~~~ 159 (401)
.+++.+|.+|..+|++++|+..|+++++++|++..++..++ .++... +. ..+..+|+.+.. .|......
T Consensus 109 ~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~-~~--------~~A~~~~~~a~~~~p~~~~~~ 179 (272)
T 3u4t_A 109 DMYGQIGSYFYNKGNFPLAIQYMEKQIRPTTTDPKVFYELGQAYYYNK-EY--------VKADSSFVKVLELKPNIYIGY 179 (272)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHGGGCCSSCCCHHHHHHHHHHHHHTT-CH--------HHHHHHHHHHHHHSTTCHHHH
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHhhcCCCcHHHHHHHHHHHHHHH-HH--------HHHHHHHHHHHHhCccchHHH
Confidence 88999999999999999999999999888888888888887 544433 33 334446777776 55555555
Q ss_pred HHHHHHHHHhhh
Q psy4703 160 VTAVNNLVVLAR 171 (401)
Q Consensus 160 ~~a~~~L~~l~~ 171 (401)
......+..+++
T Consensus 180 ~~~~~~~~~~~~ 191 (272)
T 3u4t_A 180 LWRARANAAQDP 191 (272)
T ss_dssp HHHHHHHHHHST
T ss_pred HHHHHHHHHcCc
Confidence 566666666655
No 49
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=99.60 E-value=6.6e-14 Score=124.67 Aligned_cols=161 Identities=14% Similarity=0.012 Sum_probs=136.4
Q ss_pred cCChhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcCCCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH
Q psy4703 3 DNNMNDYNKLKESGNSAFKQGDYETALDFYTKALKVTAEESHERATCLKNRAAVYLKQNQNDKVIEDCSKSLEIVPDDPK 82 (401)
Q Consensus 3 ~~~p~~a~~l~~~Gn~~~~~g~y~eAi~~y~~Al~l~~p~~~~~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~ldP~~~k 82 (401)
+.+|.++..+...|..++..|++++|+..|.++++.+ |+ ...++..+|.+|...|++++|+..++++++++|.+..
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~-~~---~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~ 77 (225)
T 2vq2_A 2 EKANQVSNIKTQLAMEYMRGQDYRQATASIEDALKSD-PK---NELAWLVRAEIYQYLKVNDKAQESFRQALSIKPDSAE 77 (225)
T ss_dssp --CCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TT---CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH
T ss_pred CCCcccHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhC-cc---chHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCChH
Confidence 4578999999999999999999999999999999999 76 7889999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHc-CCHHHHHHHHHHHHh--hCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CCCChhH
Q psy4703 83 ALFRRCQAYEAI-GKFEEAYTDAKHIHR--VEPTNKAIQPVLSRLFAIVTKRMQENEQLQNKVHNMFKYVFD-TSAPMDK 158 (401)
Q Consensus 83 A~~~~a~a~~~l-g~~eeA~~~~~kal~--l~P~~~~~~~~L~~l~~~~~~~~~a~~~~~~~~~~~~~~~~~-~~~~~~~ 158 (401)
+++.+|.++... |++++|+..|+++++ .+|.+..++..++.++...++..++. .+|+.+.. .|.+...
T Consensus 78 ~~~~l~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~--------~~~~~~~~~~~~~~~~ 149 (225)
T 2vq2_A 78 INNNYGWFLCGRLNRPAESMAYFDKALADPTYPTPYIANLNKGICSAKQGQFGLAE--------AYLKRSLAAQPQFPPA 149 (225)
T ss_dssp HHHHHHHHHHTTTCCHHHHHHHHHHHHTSTTCSCHHHHHHHHHHHHHHTTCHHHHH--------HHHHHHHHHSTTCHHH
T ss_pred HHHHHHHHHHHhcCcHHHHHHHHHHHHcCcCCcchHHHHHHHHHHHHHcCCHHHHH--------HHHHHHHHhCCCCchH
Confidence 999999999999 999999999999999 56666778888888888777765443 36666666 5555666
Q ss_pred HHHHHHHHHHhhhcchh
Q psy4703 159 RVTAVNNLVVLAREMSG 175 (401)
Q Consensus 159 ~~~a~~~L~~l~~~~~g 175 (401)
....+..+...++.+.+
T Consensus 150 ~~~la~~~~~~~~~~~A 166 (225)
T 2vq2_A 150 FKELARTKMLAGQLGDA 166 (225)
T ss_dssp HHHHHHHHHHHTCHHHH
T ss_pred HHHHHHHHHHcCCHHHH
Confidence 66666666666665443
No 50
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=99.60 E-value=2.7e-14 Score=138.30 Aligned_cols=157 Identities=17% Similarity=0.203 Sum_probs=106.8
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcCCCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHH
Q psy4703 8 DYNKLKESGNSAFKQGDYETALDFYTKALKVTAEESHERATCLKNRAAVYLKQNQNDKVIEDCSKSLEIVPDDPKALFRR 87 (401)
Q Consensus 8 ~a~~l~~~Gn~~~~~g~y~eAi~~y~~Al~l~~p~~~~~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~ldP~~~kA~~~~ 87 (401)
++..+...|..++..|+|++|+.+|+++++.+ |+ +..++.++|.+|..+|++++|+..|+++++++|+++.+++.+
T Consensus 64 ~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~-p~---~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l 139 (365)
T 4eqf_A 64 DWPGAFEEGLKRLKEGDLPVTILFMEAAILQD-PG---DAEAWQFLGITQAENENEQAAIVALQRCLELQPNNLKALMAL 139 (365)
T ss_dssp TCTTHHHHHHHHHHHTCHHHHHHHHHHHHHHC-TT---CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred chhHHHHHHHHHHHCCCHHHHHHHHHHHHHhC-cC---CHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCCHHHHHHH
Confidence 34456777777777777777777777777777 55 566777777777777777777777777777777777777777
Q ss_pred HHHHHHcCCHHHHHHHHHHHHhhCC--------------------------------------------C--CccHHHHH
Q psy4703 88 CQAYEAIGKFEEAYTDAKHIHRVEP--------------------------------------------T--NKAIQPVL 121 (401)
Q Consensus 88 a~a~~~lg~~eeA~~~~~kal~l~P--------------------------------------------~--~~~~~~~L 121 (401)
|.+|..+|++++|+..|+++++++| + ++.++..+
T Consensus 140 ~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~l 219 (365)
T 4eqf_A 140 AVSYTNTSHQQDACEALKNWIKQNPKYKYLVKNKKGSPGLTRRMSKSPVDSSVLEGVKELYLEAAHQNGDMIDPDLQTGL 219 (365)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCHHHHCC-------------------CCHHHHHHHHHHHHHHHHSCSSCCHHHHHHH
T ss_pred HHHHHccccHHHHHHHHHHHHHhCccchHHHhhhccchHHHHHHHHHHhhhhhHHHHHHHHHHHHHhCcCccCHHHHHHH
Confidence 7777777777776666666665544 3 56677778
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CCCChhHHHHHHHHHHHhhhcchhh
Q psy4703 122 SRLFAIVTKRMQENEQLQNKVHNMFKYVFD-TSAPMDKRVTAVNNLVVLAREMSGA 176 (401)
Q Consensus 122 ~~l~~~~~~~~~a~~~~~~~~~~~~~~~~~-~~~~~~~~~~a~~~L~~l~~~~~ga 176 (401)
+.++...++..++.. +|+.++. .|.+..........+...++.+.+.
T Consensus 220 ~~~~~~~g~~~~A~~--------~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~ 267 (365)
T 4eqf_A 220 GVLFHLSGEFNRAID--------AFNAALTVRPEDYSLWNRLGATLANGDRSEEAV 267 (365)
T ss_dssp HHHHHHHTCHHHHHH--------HHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHCCCHHHHHH--------HHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHH
Confidence 888777777654443 5666665 4555566666666666666665443
No 51
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=99.60 E-value=3.2e-15 Score=129.83 Aligned_cols=116 Identities=7% Similarity=-0.033 Sum_probs=104.7
Q ss_pred HHHHHHHhhcCCCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHh
Q psy4703 30 DFYTKALKVTAEESHERATCLKNRAAVYLKQNQNDKVIEDCSKSLEIVPDDPKALFRRCQAYEAIGKFEEAYTDAKHIHR 109 (401)
Q Consensus 30 ~~y~~Al~l~~p~~~~~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~ldP~~~kA~~~~a~a~~~lg~~eeA~~~~~kal~ 109 (401)
..|.+++.++ |+ +..+++++|.++++.|+|++|+..|++++.++|+++.+|+.+|.+|..+|+|++|+.+|+++++
T Consensus 23 ~~l~~al~l~-p~---~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~P~~~~~~~~lg~~~~~~g~~~~Ai~~~~~al~ 98 (151)
T 3gyz_A 23 ATLKDINAIP-DD---MMDDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFYNVDYIMGLAAIYQIKEQFQQAADLYAVAFA 98 (151)
T ss_dssp CCTGGGCCSC-HH---HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred CCHHHHhCCC-HH---HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHccHHHHHHHHHHHHh
Confidence 4577888888 65 9999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCChh
Q psy4703 110 VEPTNKAIQPVLSRLFAIVTKRMQENEQLQNKVHNMFKYVFDTSAPMD 157 (401)
Q Consensus 110 l~P~~~~~~~~L~~l~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~ 157 (401)
++|+++.++..++.++..+++..++.. +|++++...++.+
T Consensus 99 l~P~~~~~~~~lg~~~~~lg~~~eA~~--------~~~~al~l~~~~~ 138 (151)
T 3gyz_A 99 LGKNDYTPVFHTGQCQLRLKAPLKAKE--------CFELVIQHSNDEK 138 (151)
T ss_dssp HSSSCCHHHHHHHHHHHHTTCHHHHHH--------HHHHHHHHCCCHH
T ss_pred hCCCCcHHHHHHHHHHHHcCCHHHHHH--------HHHHHHHhCCCHH
Confidence 999999999999999999999865554 7777777444444
No 52
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=99.59 E-value=2.2e-14 Score=140.36 Aligned_cols=163 Identities=12% Similarity=0.075 Sum_probs=138.3
Q ss_pred ccCChhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcCCCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH
Q psy4703 2 IDNNMNDYNKLKESGNSAFKQGDYETALDFYTKALKVTAEESHERATCLKNRAAVYLKQNQNDKVIEDCSKSLEIVPDDP 81 (401)
Q Consensus 2 i~~~p~~a~~l~~~Gn~~~~~g~y~eAi~~y~~Al~l~~p~~~~~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~ldP~~~ 81 (401)
+..+|+.+..+...|..+...|++++|+..|+++++++ |+ ...++.++|.++...|++++|+..|.+++.++|+++
T Consensus 162 l~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~-p~---~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~ 237 (388)
T 1w3b_A 162 IETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLD-PN---FLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHA 237 (388)
T ss_dssp HHHCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHC-TT---CHHHHHHHHHHHHTTTCTTHHHHHHHHHHHHCTTCH
T ss_pred HHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcC-CC---cHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcCCH
Confidence 45678889999999999999999999999999999999 76 788999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CCCChhHHH
Q psy4703 82 KALFRRCQAYEAIGKFEEAYTDAKHIHRVEPTNKAIQPVLSRLFAIVTKRMQENEQLQNKVHNMFKYVFD-TSAPMDKRV 160 (401)
Q Consensus 82 kA~~~~a~a~~~lg~~eeA~~~~~kal~l~P~~~~~~~~L~~l~~~~~~~~~a~~~~~~~~~~~~~~~~~-~~~~~~~~~ 160 (401)
.+++.+|.++...|++++|+..|+++++++|+++.++..++.++...++..++.. +|+.+.. .|.+.....
T Consensus 238 ~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~--------~~~~al~~~p~~~~~~~ 309 (388)
T 1w3b_A 238 VVHGNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAED--------CYNTALRLCPTHADSLN 309 (388)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHTCSSCHHHHHHHHHHHHHHSCHHHHHH--------HHHHHHHHCTTCHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHH--------HHHHHHhhCcccHHHHH
Confidence 9999999999999999999999999999999999999999999888888755544 5666665 455556666
Q ss_pred HHHHHHHHhhhcchhh
Q psy4703 161 TAVNNLVVLAREMSGA 176 (401)
Q Consensus 161 ~a~~~L~~l~~~~~ga 176 (401)
.....+...++.+.+.
T Consensus 310 ~l~~~~~~~g~~~~A~ 325 (388)
T 1w3b_A 310 NLANIKREQGNIEEAV 325 (388)
T ss_dssp HHHHHHHTTTCHHHHH
T ss_pred HHHHHHHHcCCHHHHH
Confidence 6666666666665443
No 53
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=99.59 E-value=5.3e-14 Score=128.49 Aligned_cols=164 Identities=12% Similarity=0.097 Sum_probs=125.8
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcCCCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH---HH
Q psy4703 8 DYNKLKESGNSAFKQGDYETALDFYTKALKVTAEESHERATCLKNRAAVYLKQNQNDKVIEDCSKSLEIVPDDPK---AL 84 (401)
Q Consensus 8 ~a~~l~~~Gn~~~~~g~y~eAi~~y~~Al~l~~p~~~~~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~ldP~~~k---A~ 84 (401)
+++.++..|..++..|+|++|+..|++++... |+.+....+++++|.+|+++|+|++|+..|+++++.+|+++. ++
T Consensus 3 ~~~~~~~~a~~~~~~g~~~~A~~~~~~~~~~~-p~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~P~~~~~~~a~ 81 (225)
T 2yhc_A 3 PPNEIYATAQQKLQDGNWRQAITQLEALDNRY-PFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPNIDYVM 81 (225)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC-TTSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHH
T ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-CCChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHCcCCCcHHHHH
Confidence 46789999999999999999999999999999 876667889999999999999999999999999999999865 89
Q ss_pred HHHHHHHHH------------------cCCHHHHHHHHHHHHhhCCCCccHHHHHHHHHHHHHHHHHH----------HH
Q psy4703 85 FRRCQAYEA------------------IGKFEEAYTDAKHIHRVEPTNKAIQPVLSRLFAIVTKRMQE----------NE 136 (401)
Q Consensus 85 ~~~a~a~~~------------------lg~~eeA~~~~~kal~l~P~~~~~~~~L~~l~~~~~~~~~a----------~~ 136 (401)
+.+|.++.. +|++++|+..|+++++.+|+++.+...+.++.......... ..
T Consensus 82 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~P~~~~a~~a~~~l~~~~~~~~~~~~~~a~~~~~~~ 161 (225)
T 2yhc_A 82 YMRGLTNMALDDSALQGFFGVDRSDRDPQQARAAFSDFSKLVRGYPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTERG 161 (225)
T ss_dssp HHHHHHHHHHHC--------------CCHHHHHHHHHHHHHHTTCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHhhhhhhhhhhhccchhhcCcHHHHHHHHHHHHHHHHCcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 999999987 57999999999999999999987766544433332211110 01
Q ss_pred HHHHHHHHHHHHhhc-CCCCh---hHHHHHHHHHHHhhhcc
Q psy4703 137 QLQNKVHNMFKYVFD-TSAPM---DKRVTAVNNLVVLAREM 173 (401)
Q Consensus 137 ~~~~~~~~~~~~~~~-~~~~~---~~~~~a~~~L~~l~~~~ 173 (401)
.+ ..+...|+.++. .|.+. +.......++..+++.+
T Consensus 162 ~~-~~A~~~~~~~l~~~p~~~~~~~a~~~l~~~~~~~g~~~ 201 (225)
T 2yhc_A 162 AW-VAVVNRVEGMLRDYPDTQATRDALPLMENAYRQMQMNA 201 (225)
T ss_dssp CH-HHHHHHHHHHHHHSTTSHHHHHHHHHHHHHHHHTTCHH
T ss_pred cH-HHHHHHHHHHHHHCcCCCccHHHHHHHHHHHHHcCCcH
Confidence 11 234556777766 33332 34455555666666643
No 54
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=99.59 E-value=6.2e-14 Score=120.60 Aligned_cols=159 Identities=15% Similarity=0.128 Sum_probs=135.9
Q ss_pred ChhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcCCCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHH
Q psy4703 5 NMNDYNKLKESGNSAFKQGDYETALDFYTKALKVTAEESHERATCLKNRAAVYLKQNQNDKVIEDCSKSLEIVPDDPKAL 84 (401)
Q Consensus 5 ~p~~a~~l~~~Gn~~~~~g~y~eAi~~y~~Al~l~~p~~~~~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~ldP~~~kA~ 84 (401)
....+..+...|..++..|++++|+..|+++++.. |. ...++..+|.++...|++++|+..++++++.+|.++.++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~ 79 (186)
T 3as5_A 4 DDIRQVYYRDKGISHAKAGRYSQAVMLLEQVYDAD-AF---DVDVALHLGIAYVKTGAVDRGTELLERSLADAPDNVKVA 79 (186)
T ss_dssp CCHHHHHHHHHHHHHHHHTCHHHHHHHHTTTCCTT-SC---CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred cchhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHhC-cc---ChHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHH
Confidence 34567888999999999999999999999999999 76 788999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHhhCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CCCChhHHHHHH
Q psy4703 85 FRRCQAYEAIGKFEEAYTDAKHIHRVEPTNKAIQPVLSRLFAIVTKRMQENEQLQNKVHNMFKYVFD-TSAPMDKRVTAV 163 (401)
Q Consensus 85 ~~~a~a~~~lg~~eeA~~~~~kal~l~P~~~~~~~~L~~l~~~~~~~~~a~~~~~~~~~~~~~~~~~-~~~~~~~~~~a~ 163 (401)
+.+|.++...|++++|+..++++++.+|++..+...++.++...++..++.. +|+.+.. .+.+.......+
T Consensus 80 ~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~--------~~~~~~~~~~~~~~~~~~la 151 (186)
T 3as5_A 80 TVLGLTYVQVQKYDLAVPLLIKVAEANPINFNVRFRLGVALDNLGRFDEAID--------SFKIALGLRPNEGKVHRAIA 151 (186)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHH--------HHHHHHHHCTTCHHHHHHHH
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHhcCcHhHHHHHHHHHHHHHcCcHHHHHH--------HHHHHHhcCccchHHHHHHH
Confidence 9999999999999999999999999999999999999998888777654444 5666665 455555666666
Q ss_pred HHHHHhhhcchh
Q psy4703 164 NNLVVLAREMSG 175 (401)
Q Consensus 164 ~~L~~l~~~~~g 175 (401)
..+...++.+.+
T Consensus 152 ~~~~~~~~~~~A 163 (186)
T 3as5_A 152 FSYEQMGRHEEA 163 (186)
T ss_dssp HHHHHTTCHHHH
T ss_pred HHHHHcCCHHHH
Confidence 666666665433
No 55
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=99.59 E-value=9.8e-15 Score=149.06 Aligned_cols=162 Identities=13% Similarity=0.067 Sum_probs=137.3
Q ss_pred cCChhHHHHHHHHHHHHHHcCCH-HHHHHHHHHHHhhcCCCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH
Q psy4703 3 DNNMNDYNKLKESGNSAFKQGDY-ETALDFYTKALKVTAEESHERATCLKNRAAVYLKQNQNDKVIEDCSKSLEIVPDDP 81 (401)
Q Consensus 3 ~~~p~~a~~l~~~Gn~~~~~g~y-~eAi~~y~~Al~l~~p~~~~~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~ldP~~~ 81 (401)
...|..+..+...|..++..|+| ++|+.+|+++++++ |+ +..+|+++|.+|+.+|+|++|+.+|+++++++|+ .
T Consensus 96 ~~~~~~a~~~~~lg~~~~~~g~~~~~A~~~~~~al~~~-p~---~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~p~-~ 170 (474)
T 4abn_A 96 GSAQVEAQALMLKGKALNVTPDYSPEAEVLLSKAVKLE-PE---LVEAWNQLGEVYWKKGDVTSAHTCFSGALTHCKN-K 170 (474)
T ss_dssp TTCCCCHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHC-TT---CHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCCC-H
T ss_pred ccCchhHHHHHHHHHHHHhccccHHHHHHHHHHHHhhC-CC---CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC-H
Confidence 45677888999999999999999 99999999999999 76 7889999999999999999999999999999998 7
Q ss_pred HHHHHHHHHHHHc---------CCHHHHHHHHHHHHhhCCCCccHHHHHHHHHHHH--------HHHHHHHHHHHHHHHH
Q psy4703 82 KALFRRCQAYEAI---------GKFEEAYTDAKHIHRVEPTNKAIQPVLSRLFAIV--------TKRMQENEQLQNKVHN 144 (401)
Q Consensus 82 kA~~~~a~a~~~l---------g~~eeA~~~~~kal~l~P~~~~~~~~L~~l~~~~--------~~~~~a~~~~~~~~~~ 144 (401)
.+++++|.+|..+ |++++|+..|+++++++|++..++..++.++... ++..++..
T Consensus 171 ~~~~~lg~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~~~~g~~~~A~~-------- 242 (474)
T 4abn_A 171 VSLQNLSMVLRQLQTDSGDEHSRHVMDSVRQAKLAVQMDVLDGRSWYILGNAYLSLYFNTGQNPKISQQALS-------- 242 (474)
T ss_dssp HHHHHHHHHHTTCCCSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHH--------
T ss_pred HHHHHHHHHHHHhccCChhhhhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHhhccccchHHHHHH--------
Confidence 9999999999999 9999999999999999999999999999998888 77777766
Q ss_pred HHHHhhc-CC---CChhHHHHHHHHHHHhhhcchhhH
Q psy4703 145 MFKYVFD-TS---APMDKRVTAVNNLVVLAREMSGAE 177 (401)
Q Consensus 145 ~~~~~~~-~~---~~~~~~~~a~~~L~~l~~~~~gae 177 (401)
+|+.++. .| .........+..+..+++++++.+
T Consensus 243 ~~~~al~~~p~~~~~~~~~~~lg~~~~~~g~~~~A~~ 279 (474)
T 4abn_A 243 AYAQAEKVDRKASSNPDLHLNRATLHKYEESYGEALE 279 (474)
T ss_dssp HHHHHHHHCGGGGGCHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHhCCCcccCHHHHHHHHHHHHHcCCHHHHHH
Confidence 5666666 45 566777777777777777765543
No 56
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=99.59 E-value=6e-14 Score=112.90 Aligned_cols=119 Identities=28% Similarity=0.449 Sum_probs=109.3
Q ss_pred ChhH-HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcCCCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHH
Q psy4703 5 NMND-YNKLKESGNSAFKQGDYETALDFYTKALKVTAEESHERATCLKNRAAVYLKQNQNDKVIEDCSKSLEIVPDDPKA 83 (401)
Q Consensus 5 ~p~~-a~~l~~~Gn~~~~~g~y~eAi~~y~~Al~l~~p~~~~~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~ldP~~~kA 83 (401)
+|.. +..+...|..++..|++++|+..|.+++... |+ ...++.++|.++...|++++|+..++++++.+|.++.+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~-~~---~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~ 79 (125)
T 1na0_A 4 DPGNSAEAWYNLGNAYYKQGDYDEAIEYYQKALELD-PN---NAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEA 79 (125)
T ss_dssp ---CHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TT---CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH
T ss_pred CccccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHC-cC---cHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCccHHH
Confidence 4544 7889999999999999999999999999999 76 78899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCccHHHHHHHHHHH
Q psy4703 84 LFRRCQAYEAIGKFEEAYTDAKHIHRVEPTNKAIQPVLSRLFAI 127 (401)
Q Consensus 84 ~~~~a~a~~~lg~~eeA~~~~~kal~l~P~~~~~~~~L~~l~~~ 127 (401)
++.+|.++..+|++++|+..|+++++++|+++.+...++.++..
T Consensus 80 ~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~ 123 (125)
T 1na0_A 80 WYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAKQNLGNAKQK 123 (125)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999988888776543
No 57
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=99.59 E-value=2.1e-14 Score=146.60 Aligned_cols=114 Identities=17% Similarity=0.066 Sum_probs=103.6
Q ss_pred cCCHHHHHHHHHHHHhhcCCCCcchHHHHHHHHHHHHHcCCH-HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHH
Q psy4703 22 QGDYETALDFYTKALKVTAEESHERATCLKNRAAVYLKQNQN-DKVIEDCSKSLEIVPDDPKALFRRCQAYEAIGKFEEA 100 (401)
Q Consensus 22 ~g~y~eAi~~y~~Al~l~~p~~~~~~~~~~n~a~~y~klg~y-~~Ai~~~~kAL~ldP~~~kA~~~~a~a~~~lg~~eeA 100 (401)
.+.+++|+..+.++.... |. .+.+++++|.+|...|+| ++|+..|+++++++|+++.+|+.+|.+|..+|++++|
T Consensus 81 ~~~~~~al~~l~~~~~~~-~~---~a~~~~~lg~~~~~~g~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A 156 (474)
T 4abn_A 81 QEEMEKTLQQMEEVLGSA-QV---EAQALMLKGKALNVTPDYSPEAEVLLSKAVKLEPELVEAWNQLGEVYWKKGDVTSA 156 (474)
T ss_dssp HHHHHHHHHHHHHHHTTC-CC---CHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHH
T ss_pred HHHHHHHHHHHHHHhccC-ch---hHHHHHHHHHHHHhccccHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHH
Confidence 345788999999988888 65 899999999999999999 9999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhCCCCccHHHHHHHHHHHH---------HHHHHHHHHHHH
Q psy4703 101 YTDAKHIHRVEPTNKAIQPVLSRLFAIV---------TKRMQENEQLQN 140 (401)
Q Consensus 101 ~~~~~kal~l~P~~~~~~~~L~~l~~~~---------~~~~~a~~~~~~ 140 (401)
+..|+++++++|+ ..++..++.++... ++..++...+.+
T Consensus 157 ~~~~~~al~~~p~-~~~~~~lg~~~~~~~~~~~~~~~g~~~~A~~~~~~ 204 (474)
T 4abn_A 157 HTCFSGALTHCKN-KVSLQNLSMVLRQLQTDSGDEHSRHVMDSVRQAKL 204 (474)
T ss_dssp HHHHHHHHTTCCC-HHHHHHHHHHHTTCCCSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhCCC-HHHHHHHHHHHHHhccCChhhhhhhHHHHHHHHHH
Confidence 9999999999999 68899999999888 888877765543
No 58
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=99.59 E-value=2.1e-13 Score=124.59 Aligned_cols=160 Identities=16% Similarity=0.142 Sum_probs=137.1
Q ss_pred CChhH-HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcCCCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH
Q psy4703 4 NNMND-YNKLKESGNSAFKQGDYETALDFYTKALKVTAEESHERATCLKNRAAVYLKQNQNDKVIEDCSKSLEIVPDDPK 82 (401)
Q Consensus 4 ~~p~~-a~~l~~~Gn~~~~~g~y~eAi~~y~~Al~l~~p~~~~~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~ldP~~~k 82 (401)
.+|.. +..+...|..++..|++++|+.+|+++++.+ |+ ...++.++|.+|...|++++|+..++++++.+|.+..
T Consensus 31 ~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~-~~---~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~ 106 (252)
T 2ho1_A 31 KGRDEARDAYIQLGLGYLQRGNTEQAKVPLRKALEID-PS---SADAHAALAVVFQTEMEPKLADEEYRKALASDSRNAR 106 (252)
T ss_dssp CCHHHHHHHHHHHHHHHHHTTCTGGGHHHHHHHHHHC-TT---CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH
T ss_pred cchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHhcC-CC---hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCcHH
Confidence 46766 8999999999999999999999999999999 76 7899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHh--hCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CCCChhHH
Q psy4703 83 ALFRRCQAYEAIGKFEEAYTDAKHIHR--VEPTNKAIQPVLSRLFAIVTKRMQENEQLQNKVHNMFKYVFD-TSAPMDKR 159 (401)
Q Consensus 83 A~~~~a~a~~~lg~~eeA~~~~~kal~--l~P~~~~~~~~L~~l~~~~~~~~~a~~~~~~~~~~~~~~~~~-~~~~~~~~ 159 (401)
+++.+|.++..+|++++|+..|+++++ .+|.+..++..++.++...++..++.. +|+.+.. .+......
T Consensus 107 ~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~--------~~~~~~~~~~~~~~~~ 178 (252)
T 2ho1_A 107 VLNNYGGFLYEQKRYEEAYQRLLEASQDTLYPERSRVFENLGLVSLQMKKPAQAKE--------YFEKSLRLNRNQPSVA 178 (252)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHTTCTTCTTHHHHHHHHHHHHHHTTCHHHHHH--------HHHHHHHHCSCCHHHH
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHhCccCcccHHHHHHHHHHHHHcCCHHHHHH--------HHHHHHhcCcccHHHH
Confidence 999999999999999999999999999 888888888888888888777654443 6666666 45556666
Q ss_pred HHHHHHHHHhhhcchh
Q psy4703 160 VTAVNNLVVLAREMSG 175 (401)
Q Consensus 160 ~~a~~~L~~l~~~~~g 175 (401)
...+..+...++.+.+
T Consensus 179 ~~la~~~~~~g~~~~A 194 (252)
T 2ho1_A 179 LEMADLLYKEREYVPA 194 (252)
T ss_dssp HHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHcCCHHHH
Confidence 6666666666665433
No 59
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=99.59 E-value=1.9e-14 Score=130.15 Aligned_cols=118 Identities=19% Similarity=0.234 Sum_probs=101.4
Q ss_pred ccCChhHHHHHHH----------------HHHHHHHcCCHHHHHHHHHHHHhhcCCCCcchHHHHHHHHHHHHHcCCHHH
Q psy4703 2 IDNNMNDYNKLKE----------------SGNSAFKQGDYETALDFYTKALKVTAEESHERATCLKNRAAVYLKQNQNDK 65 (401)
Q Consensus 2 i~~~p~~a~~l~~----------------~Gn~~~~~g~y~eAi~~y~~Al~l~~p~~~~~~~~~~n~a~~y~klg~y~~ 65 (401)
++.+|+++..+.. .|..++..|+|++|+..|+++++++ |+ +..+++++|.+|+.+|++++
T Consensus 31 l~~~p~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~-p~---~~~~~~~lg~~~~~~g~~~~ 106 (208)
T 3urz_A 31 IALNIDRTEMYYWTNVDKNSEISSKLATELALAYKKNRNYDKAYLFYKELLQKA-PN---NVDCLEACAEMQVCRGQEKD 106 (208)
T ss_dssp HHHCHHHHHHHHHHHSCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TT---CHHHHHHHHHHHHHHTCHHH
T ss_pred HHhCCCChHHHHHhhhcchhhhhHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHC-CC---CHHHHHHHHHHHHHcCCHHH
Confidence 4568899999988 9999999999999999999999999 77 89999999999999999999
Q ss_pred HHHHHHHHHHhCCCCHHHHHHHHHHHHHc-----------------------------------CCHHHHHHHHHHHHhh
Q psy4703 66 VIEDCSKSLEIVPDDPKALFRRCQAYEAI-----------------------------------GKFEEAYTDAKHIHRV 110 (401)
Q Consensus 66 Ai~~~~kAL~ldP~~~kA~~~~a~a~~~l-----------------------------------g~~eeA~~~~~kal~l 110 (401)
|+.+|+++++++|+++.+++++|.+|... |+|++|+.+|++++++
T Consensus 107 A~~~~~~al~~~P~~~~a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l 186 (208)
T 3urz_A 107 ALRMYEKILQLEADNLAANIFLGNYYYLTAEQEKKKLETDYKKLSSPTKMQYARYRDGLSKLFTTRYEKARNSLQKVILR 186 (208)
T ss_dssp HHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHC---CCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHcCCCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCCCchhHHHHHHHHHHHHccCHHHHHHHHHHHHHh
Confidence 99999999999999999999988887543 4577788888888888
Q ss_pred CCCCccHHHHHHHH
Q psy4703 111 EPTNKAIQPVLSRL 124 (401)
Q Consensus 111 ~P~~~~~~~~L~~l 124 (401)
+|++ .+...+.++
T Consensus 187 ~P~~-~~~~~l~~i 199 (208)
T 3urz_A 187 FPST-EAQKTLDKI 199 (208)
T ss_dssp SCCH-HHHHHHHHH
T ss_pred CCCH-HHHHHHHHH
Confidence 8863 333444443
No 60
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=99.58 E-value=1.2e-13 Score=125.66 Aligned_cols=103 Identities=22% Similarity=0.315 Sum_probs=96.8
Q ss_pred hhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcCCCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC-----
Q psy4703 6 MNDYNKLKESGNSAFKQGDYETALDFYTKALKVTAEESHERATCLKNRAAVYLKQNQNDKVIEDCSKSLEIVPDD----- 80 (401)
Q Consensus 6 p~~a~~l~~~Gn~~~~~g~y~eAi~~y~~Al~l~~p~~~~~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~ldP~~----- 80 (401)
+..++.+...|..++..|+|++|+.+|+++++.+ + +..++.++|.+|..+|+|++|+..+.++++++|.+
T Consensus 2 ~~~a~~~~~~g~~~~~~~~~~~A~~~~~~a~~~~-~----~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~ 76 (258)
T 3uq3_A 2 GSMADKEKAEGNKFYKARQFDEAIEHYNKAWELH-K----DITYLNNRAAAEYEKGEYETAISTLNDAVEQGREMRADYK 76 (258)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS-C----CTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHH
T ss_pred chHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhh-c----cHHHHHHHHHHHHHcccHHHHHHHHHHHHHhCcccccchH
Confidence 5678999999999999999999999999999998 4 57899999999999999999999999999999977
Q ss_pred --HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC
Q psy4703 81 --PKALFRRCQAYEAIGKFEEAYTDAKHIHRVEPT 113 (401)
Q Consensus 81 --~kA~~~~a~a~~~lg~~eeA~~~~~kal~l~P~ 113 (401)
+.+++.+|.++..+|++++|+..|+++++++|+
T Consensus 77 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~ 111 (258)
T 3uq3_A 77 VISKSFARIGNAYHKLGDLKKTIEYYQKSLTEHRT 111 (258)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHHHHHHHHHcccHHHHHHHHHHHHhcCch
Confidence 799999999999999999999999999996654
No 61
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=99.58 E-value=7.1e-14 Score=127.81 Aligned_cols=159 Identities=9% Similarity=0.075 Sum_probs=136.8
Q ss_pred ccCChhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcCCCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHH--hCCC
Q psy4703 2 IDNNMNDYNKLKESGNSAFKQGDYETALDFYTKALKVTAEESHERATCLKNRAAVYLKQNQNDKVIEDCSKSLE--IVPD 79 (401)
Q Consensus 2 i~~~p~~a~~l~~~Gn~~~~~g~y~eAi~~y~~Al~l~~p~~~~~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~--ldP~ 79 (401)
++.+|..+..+...|..++..|++++|+.+|.++++.. |+ ...++.++|.+|...|++++|+..+++++. .+|.
T Consensus 64 l~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~-~~---~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~ 139 (252)
T 2ho1_A 64 LEIDPSSADAHAALAVVFQTEMEPKLADEEYRKALASD-SR---NARVLNNYGGFLYEQKRYEEAYQRLLEASQDTLYPE 139 (252)
T ss_dssp HHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TT---CHHHHHHHHHHHHHTTCHHHHHHHHHHHTTCTTCTT
T ss_pred HhcCCChHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHC-cC---cHHHHHHHHHHHHHHhHHHHHHHHHHHHHhCccCcc
Confidence 34578889999999999999999999999999999999 76 788999999999999999999999999999 8899
Q ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CCCChhH
Q psy4703 80 DPKALFRRCQAYEAIGKFEEAYTDAKHIHRVEPTNKAIQPVLSRLFAIVTKRMQENEQLQNKVHNMFKYVFD-TSAPMDK 158 (401)
Q Consensus 80 ~~kA~~~~a~a~~~lg~~eeA~~~~~kal~l~P~~~~~~~~L~~l~~~~~~~~~a~~~~~~~~~~~~~~~~~-~~~~~~~ 158 (401)
++.+++.+|.++..+|++++|+..|+++++++|.+..++..++.++...++..++. .+|+.+.. .+.....
T Consensus 140 ~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~--------~~~~~~~~~~~~~~~~ 211 (252)
T 2ho1_A 140 RSRVFENLGLVSLQMKKPAQAKEYFEKSLRLNRNQPSVALEMADLLYKEREYVPAR--------QYYDLFAQGGGQNARS 211 (252)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHH--------HHHHHHHTTSCCCHHH
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHcCCHHHHH--------HHHHHHHHhCcCcHHH
Confidence 99999999999999999999999999999999999999999999988887775443 46777776 4444444
Q ss_pred HHHHHHHHHHhhhc
Q psy4703 159 RVTAVNNLVVLARE 172 (401)
Q Consensus 159 ~~~a~~~L~~l~~~ 172 (401)
.......+...++.
T Consensus 212 ~~~~~~~~~~~g~~ 225 (252)
T 2ho1_A 212 LLLGIRLAKVFEDR 225 (252)
T ss_dssp HHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHccCH
Confidence 45555555555554
No 62
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=99.58 E-value=9.6e-14 Score=134.41 Aligned_cols=111 Identities=13% Similarity=0.025 Sum_probs=92.0
Q ss_pred HHHHHHHHHHhhcCCCC-cchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHH
Q psy4703 27 TALDFYTKALKVTAEES-HERATCLKNRAAVYLKQNQNDKVIEDCSKSLEIVPDDPKALFRRCQAYEAIGKFEEAYTDAK 105 (401)
Q Consensus 27 eAi~~y~~Al~l~~p~~-~~~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~ldP~~~kA~~~~a~a~~~lg~~eeA~~~~~ 105 (401)
.++..+..+.... +.+ ......++++|.++++.|+|++|+..|+++++.+|+++.+++.+|.+|..+|++++|+..|+
T Consensus 45 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~ 123 (365)
T 4eqf_A 45 VTVSASEKGYYFH-TENPFKDWPGAFEEGLKRLKEGDLPVTILFMEAAILQDPGDAEAWQFLGITQAENENEQAAIVALQ 123 (365)
T ss_dssp --------CCCCC-SSCTTTTCTTHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred hhhHHHHHhhhcc-cCCcccchhHHHHHHHHHHHCCCHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHCCCHHHHHHHHH
Confidence 4555667767666 432 23556799999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhCCCCccHHHHHHHHHHHHHHHHHHHHHH
Q psy4703 106 HIHRVEPTNKAIQPVLSRLFAIVTKRMQENEQL 138 (401)
Q Consensus 106 kal~l~P~~~~~~~~L~~l~~~~~~~~~a~~~~ 138 (401)
++++++|++..++..++.++...++..++...+
T Consensus 124 ~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~ 156 (365)
T 4eqf_A 124 RCLELQPNNLKALMALAVSYTNTSHQQDACEAL 156 (365)
T ss_dssp HHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHhcCCCCHHHHHHHHHHHHccccHHHHHHHH
Confidence 999999999999999999999888777766544
No 63
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=99.57 E-value=1.1e-13 Score=119.03 Aligned_cols=131 Identities=15% Similarity=0.204 Sum_probs=122.6
Q ss_pred ccCChhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcCCCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH
Q psy4703 2 IDNNMNDYNKLKESGNSAFKQGDYETALDFYTKALKVTAEESHERATCLKNRAAVYLKQNQNDKVIEDCSKSLEIVPDDP 81 (401)
Q Consensus 2 i~~~p~~a~~l~~~Gn~~~~~g~y~eAi~~y~~Al~l~~p~~~~~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~ldP~~~ 81 (401)
+..+|.++..+...|..++..|++++|+.+|.++++.. |+ ...++.++|.++...|++++|+..+++++..+|.++
T Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~-~~---~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~ 110 (186)
T 3as5_A 35 YDADAFDVDVALHLGIAYVKTGAVDRGTELLERSLADA-PD---NVKVATVLGLTYVQVQKYDLAVPLLIKVAEANPINF 110 (186)
T ss_dssp CCTTSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TT---CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCH
T ss_pred HHhCccChHHHHHHHHHHHHcCCHHHHHHHHHHHHhcC-CC---CHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCcHhH
Confidence 56778889999999999999999999999999999999 76 788999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCccHHHHHHHHHHHHHHHHHHHH
Q psy4703 82 KALFRRCQAYEAIGKFEEAYTDAKHIHRVEPTNKAIQPVLSRLFAIVTKRMQENE 136 (401)
Q Consensus 82 kA~~~~a~a~~~lg~~eeA~~~~~kal~l~P~~~~~~~~L~~l~~~~~~~~~a~~ 136 (401)
.+++.+|.++..+|++++|+..++++++.+|++..+...++.++...++..++..
T Consensus 111 ~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~ 165 (186)
T 3as5_A 111 NVRFRLGVALDNLGRFDEAIDSFKIALGLRPNEGKVHRAIAFSYEQMGRHEEALP 165 (186)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHHHcCcHHHHHHHHHHHHhcCccchHHHHHHHHHHHHcCCHHHHHH
Confidence 9999999999999999999999999999999999999999999988887755544
No 64
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=99.57 E-value=4.4e-13 Score=126.41 Aligned_cols=122 Identities=15% Similarity=0.229 Sum_probs=61.6
Q ss_pred hhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcCCCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHH
Q psy4703 6 MNDYNKLKESGNSAFKQGDYETALDFYTKALKVTAEESHERATCLKNRAAVYLKQNQNDKVIEDCSKSLEIVPDDPKALF 85 (401)
Q Consensus 6 p~~a~~l~~~Gn~~~~~g~y~eAi~~y~~Al~l~~p~~~~~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~ldP~~~kA~~ 85 (401)
+.+...+...|..++..|+|++|+..|+++++.+ |. +..++..++.++..+|++++|+..++++++.+|.++.+++
T Consensus 19 ~~~~~~~~~~a~~~~~~g~~~~A~~~~~~~l~~~-p~---~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~ 94 (330)
T 3hym_B 19 QENLDVVVSLAERHYYNCDFKMCYKLTSVVMEKD-PF---HASCLPVHIGTLVELNKANELFYLSHKLVDLYPSNPVSWF 94 (330)
T ss_dssp -CCCTTHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TT---CTTTHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTHHHH
T ss_pred hhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcC-CC---ChhhHHHHHHHHHHhhhHHHHHHHHHHHHHhCcCCHHHHH
Confidence 3344445555555555555555555555555555 43 3334444444455555555555555555555555555555
Q ss_pred HHHHHHHHcC-CHHHHHHHHHHHHhhCCCCccHHHHHHHHHHHHHHH
Q psy4703 86 RRCQAYEAIG-KFEEAYTDAKHIHRVEPTNKAIQPVLSRLFAIVTKR 131 (401)
Q Consensus 86 ~~a~a~~~lg-~~eeA~~~~~kal~l~P~~~~~~~~L~~l~~~~~~~ 131 (401)
.+|.++...| ++++|+..|+++++++|++..++..++.++...++.
T Consensus 95 ~l~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~ 141 (330)
T 3hym_B 95 AVGCYYLMVGHKNEHARRYLSKATTLEKTYGPAWIAYGHSFAVESEH 141 (330)
T ss_dssp HHHHHHHHSCSCHHHHHHHHHHHHTTCTTCTHHHHHHHHHHHHHTCH
T ss_pred HHHHHHHHhhhhHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHccCH
Confidence 5555555555 455555555555555555544444444444444444
No 65
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=99.57 E-value=6.3e-14 Score=122.25 Aligned_cols=120 Identities=18% Similarity=0.191 Sum_probs=110.6
Q ss_pred ccCChhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcCCCCcchHHHHHHHHHH-HHHcCCH--HHHHHHHHHHHHhCC
Q psy4703 2 IDNNMNDYNKLKESGNSAFKQGDYETALDFYTKALKVTAEESHERATCLKNRAAV-YLKQNQN--DKVIEDCSKSLEIVP 78 (401)
Q Consensus 2 i~~~p~~a~~l~~~Gn~~~~~g~y~eAi~~y~~Al~l~~p~~~~~~~~~~n~a~~-y~klg~y--~~Ai~~~~kAL~ldP 78 (401)
+..+|.++..+...|..++..|+|++|+.+|.++++++ |+ +..++.++|.+ |+..|++ ++|+..++++++++|
T Consensus 37 l~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~-p~---~~~~~~~la~~l~~~~~~~~~~~A~~~~~~al~~~p 112 (177)
T 2e2e_A 37 IRANPQNSEQWALLGEYYLWQNDYSNSLLAYRQALQLR-GE---NAELYAALATVLYYQASQHMTAQTRAMIDKALALDS 112 (177)
T ss_dssp HHHCCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH-CS---CHHHHHHHHHHHHHHTTTCCCHHHHHHHHHHHHHCT
T ss_pred HHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcC-CC---CHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHhCC
Confidence 45678899999999999999999999999999999999 76 78899999999 8899999 999999999999999
Q ss_pred CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCccHHHHHHHHH
Q psy4703 79 DDPKALFRRCQAYEAIGKFEEAYTDAKHIHRVEPTNKAIQPVLSRLF 125 (401)
Q Consensus 79 ~~~kA~~~~a~a~~~lg~~eeA~~~~~kal~l~P~~~~~~~~L~~l~ 125 (401)
+++.+++.+|.+|..+|++++|+..|+++++++|++......+..+.
T Consensus 113 ~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~i~ 159 (177)
T 2e2e_A 113 NEITALMLLASDAFMQANYAQAIELWQKVMDLNSPRINRTQLVESIN 159 (177)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCTTSCHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHcccHHHHHHHHHHHHhhCCCCccHHHHHHHHH
Confidence 99999999999999999999999999999999999987666554443
No 66
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.57 E-value=6.2e-15 Score=157.34 Aligned_cols=153 Identities=14% Similarity=0.036 Sum_probs=135.6
Q ss_pred cCChhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcCCCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH
Q psy4703 3 DNNMNDYNKLKESGNSAFKQGDYETALDFYTKALKVTAEESHERATCLKNRAAVYLKQNQNDKVIEDCSKSLEIVPDDPK 82 (401)
Q Consensus 3 ~~~p~~a~~l~~~Gn~~~~~g~y~eAi~~y~~Al~l~~p~~~~~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~ldP~~~k 82 (401)
+.+|+++..+...|..++..|+|++|+..|+++++++ |+ +..+|+++|.+|+.+|+|++|+.+|+++++++|+++.
T Consensus 427 ~~~p~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~-p~---~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~ 502 (681)
T 2pzi_A 427 VDFSESVELPLMEVRALLDLGDVAKATRKLDDLAERV-GW---RWRLVWYRAVAELLTGDYDSATKHFTEVLDTFPGELA 502 (681)
T ss_dssp -CCTTCSHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH-CC---CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCSH
T ss_pred cccccchhHHHHHHHHHHhcCCHHHHHHHHHHHhccC-cc---hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChH
Confidence 5679999999999999999999999999999999999 77 8999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC-CCChhHHHH
Q psy4703 83 ALFRRCQAYEAIGKFEEAYTDAKHIHRVEPTNKAIQPVLSRLFAIVTKRMQENEQLQNKVHNMFKYVFDT-SAPMDKRVT 161 (401)
Q Consensus 83 A~~~~a~a~~~lg~~eeA~~~~~kal~l~P~~~~~~~~L~~l~~~~~~~~~a~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 161 (401)
+++++|.+|..+|+|++ +.+|+++++++|++..++..++.++..+++..++.. .|+.+... |........
T Consensus 503 ~~~~lg~~~~~~g~~~~-~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~A~~--------~~~~al~l~P~~~~a~~~ 573 (681)
T 2pzi_A 503 PKLALAATAELAGNTDE-HKFYQTVWSTNDGVISAAFGLARARSAEGDRVGAVR--------TLDEVPPTSRHFTTARLT 573 (681)
T ss_dssp HHHHHHHHHHHHTCCCT-TCHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHH--------HHHTSCTTSTTHHHHHHH
T ss_pred HHHHHHHHHHHcCChHH-HHHHHHHHHhCCchHHHHHHHHHHHHHcCCHHHHHH--------HHHhhcccCcccHHHHHH
Confidence 99999999999999999 999999999999999999999999999888755444 78888884 444455555
Q ss_pred HHHHHHH
Q psy4703 162 AVNNLVV 168 (401)
Q Consensus 162 a~~~L~~ 168 (401)
....++.
T Consensus 574 ~~~~~~~ 580 (681)
T 2pzi_A 574 SAVTLLS 580 (681)
T ss_dssp HHHHTC-
T ss_pred HHHHHHc
Confidence 5444433
No 67
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=99.57 E-value=1e-13 Score=123.42 Aligned_cols=138 Identities=14% Similarity=0.059 Sum_probs=125.0
Q ss_pred ccCChhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcCCCCcchHHHHHHHHHHHHHc-CCHHHHHHHHHHHHH--hCC
Q psy4703 2 IDNNMNDYNKLKESGNSAFKQGDYETALDFYTKALKVTAEESHERATCLKNRAAVYLKQ-NQNDKVIEDCSKSLE--IVP 78 (401)
Q Consensus 2 i~~~p~~a~~l~~~Gn~~~~~g~y~eAi~~y~~Al~l~~p~~~~~~~~~~n~a~~y~kl-g~y~~Ai~~~~kAL~--ldP 78 (401)
++.+|.....+...|..+...|++++|+.+|.++++.+ |+ ...++.++|.+|... |++++|+..++++++ .+|
T Consensus 35 ~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~-~~---~~~~~~~l~~~~~~~~~~~~~A~~~~~~~~~~~~~~ 110 (225)
T 2vq2_A 35 LKSDPKNELAWLVRAEIYQYLKVNDKAQESFRQALSIK-PD---SAEINNNYGWFLCGRLNRPAESMAYFDKALADPTYP 110 (225)
T ss_dssp HHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TT---CHHHHHHHHHHHHTTTCCHHHHHHHHHHHHTSTTCS
T ss_pred HHhCccchHHHHHHHHHHHHcCChHHHHHHHHHHHHhC-CC---ChHHHHHHHHHHHHhcCcHHHHHHHHHHHHcCcCCc
Confidence 34578889999999999999999999999999999999 76 788999999999999 999999999999999 677
Q ss_pred CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q psy4703 79 DDPKALFRRCQAYEAIGKFEEAYTDAKHIHRVEPTNKAIQPVLSRLFAIVTKRMQENEQLQNKVHNMFKYVFD 151 (401)
Q Consensus 79 ~~~kA~~~~a~a~~~lg~~eeA~~~~~kal~l~P~~~~~~~~L~~l~~~~~~~~~a~~~~~~~~~~~~~~~~~ 151 (401)
.+..+++.+|.++..+|++++|+..|+++++.+|++..++..++.++...++..++.. +|+.+..
T Consensus 111 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~--------~~~~~~~ 175 (225)
T 2vq2_A 111 TPYIANLNKGICSAKQGQFGLAEAYLKRSLAAQPQFPPAFKELARTKMLAGQLGDADY--------YFKKYQS 175 (225)
T ss_dssp CHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHTCHHHHHH--------HHHHHHH
T ss_pred chHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHcCCHHHHHH--------HHHHHHH
Confidence 7799999999999999999999999999999999999999999999988887755544 5666665
No 68
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=99.56 E-value=1.6e-14 Score=114.53 Aligned_cols=107 Identities=13% Similarity=0.232 Sum_probs=102.5
Q ss_pred ChhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcCCCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC--CHH
Q psy4703 5 NMNDYNKLKESGNSAFKQGDYETALDFYTKALKVTAEESHERATCLKNRAAVYLKQNQNDKVIEDCSKSLEIVPD--DPK 82 (401)
Q Consensus 5 ~p~~a~~l~~~Gn~~~~~g~y~eAi~~y~~Al~l~~p~~~~~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~ldP~--~~k 82 (401)
+|+++..+...|..++..|+|++|+.+|+++++++ |+ ...++.++|.+|+.+|+|++|+..++++++++|. +..
T Consensus 2 ~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~-~~---~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~ 77 (112)
T 2kck_A 2 VDQNPEEYYLEGVLQYDAGNYTESIDLFEKAIQLD-PE---ESKYWLMKGKALYNLERYEEAVDCYNYVINVIEDEYNKD 77 (112)
T ss_dssp CCSSTTGGGGHHHHHHSSCCHHHHHHHHHHHHHHC-CC---CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSCCTTCHH
T ss_pred CCCcHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhC-cC---CHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcccchHH
Confidence 67788889999999999999999999999999999 76 7889999999999999999999999999999999 999
Q ss_pred HHHHHHHHHHHc-CCHHHHHHHHHHHHhhCCCCc
Q psy4703 83 ALFRRCQAYEAI-GKFEEAYTDAKHIHRVEPTNK 115 (401)
Q Consensus 83 A~~~~a~a~~~l-g~~eeA~~~~~kal~l~P~~~ 115 (401)
+++.+|.++..+ |++++|+.++++++..+|.++
T Consensus 78 ~~~~l~~~~~~~~~~~~~A~~~~~~~~~~~p~~~ 111 (112)
T 2kck_A 78 VWAAKADALRYIEGKEVEAEIAEARAKLEHHHHH 111 (112)
T ss_dssp HHHHHHHHHTTCSSCSHHHHHHHHHHGGGCCCCC
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHhhcccCCC
Confidence 999999999999 999999999999999999875
No 69
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=99.56 E-value=1.7e-13 Score=122.42 Aligned_cols=133 Identities=15% Similarity=0.137 Sum_probs=118.9
Q ss_pred hhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcCCCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHH
Q psy4703 6 MNDYNKLKESGNSAFKQGDYETALDFYTKALKVTAEESHERATCLKNRAAVYLKQNQNDKVIEDCSKSLEIVPDDPKALF 85 (401)
Q Consensus 6 p~~a~~l~~~Gn~~~~~g~y~eAi~~y~~Al~l~~p~~~~~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~ldP~~~kA~~ 85 (401)
...+..++..|+.++..|+|++|+.+|++++ + | .+.+++++|.+|..+|+|++|+..|+++++++|+++.+++
T Consensus 3 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~a~--~-~----~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~ 75 (213)
T 1hh8_A 3 LVEAISLWNEGVLAADKKDWKGALDAFSAVQ--D-P----HSRICFNIGCMYTILKNMTEAEKAFTRSINRDKHLAVAYF 75 (213)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHTSS--S-C----CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred hHHHHHHHHHHHHHHHhCCHHHHHHHHHHHc--C-C----ChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchHHHH
Confidence 3466788999999999999999999999985 4 4 4679999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHhhCCCCc----------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy4703 86 RRCQAYEAIGKFEEAYTDAKHIHRVEPTNK----------------AIQPVLSRLFAIVTKRMQENEQLQNKVHNMFKYV 149 (401)
Q Consensus 86 ~~a~a~~~lg~~eeA~~~~~kal~l~P~~~----------------~~~~~L~~l~~~~~~~~~a~~~~~~~~~~~~~~~ 149 (401)
++|.+|..+|+|++|+.+|++++++.|++. .++..++.++...++..++. .+|+.+
T Consensus 76 ~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~--------~~~~~a 147 (213)
T 1hh8_A 76 QRGMLYYQTEKYDLAIKDLKEALIQLRGNQLIDYKILGLQFKLFACEVLYNIAFMYAKKEEWKKAE--------EQLALA 147 (213)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHTTTTCSEEECGGGTBCCEEEHHHHHHHHHHHHHHTTCHHHHH--------HHHHHH
T ss_pred HHHHHHHHcccHHHHHHHHHHHHHhCCCccHHHHHHhccccCccchHHHHHHHHHHHHccCHHHHH--------HHHHHH
Confidence 999999999999999999999999999887 88889999988888775444 477888
Q ss_pred hcCC
Q psy4703 150 FDTS 153 (401)
Q Consensus 150 ~~~~ 153 (401)
....
T Consensus 148 l~~~ 151 (213)
T 1hh8_A 148 TSMK 151 (213)
T ss_dssp HTTC
T ss_pred HHcC
Confidence 7733
No 70
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=99.56 E-value=9.6e-14 Score=125.57 Aligned_cols=204 Identities=13% Similarity=0.111 Sum_probs=137.6
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcCCCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHH
Q psy4703 8 DYNKLKESGNSAFKQGDYETALDFYTKALKVTAEESHERATCLKNRAAVYLKQNQNDKVIEDCSKSLEIVPDDPKALFRR 87 (401)
Q Consensus 8 ~a~~l~~~Gn~~~~~g~y~eAi~~y~~Al~l~~p~~~~~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~ldP~~~kA~~~~ 87 (401)
.+..+...|..++..|+|++|+.+|+++++.+ |+ ...++.++|.+|...|++++|+..++++++.+|.+..+++.+
T Consensus 22 ~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~-~~---~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l 97 (243)
T 2q7f_A 22 ASMTGGQQMGRGSEFGDYEKAAEAFTKAIEEN-KE---DAIPYINFANLLSSVNELERALAFYDKALELDSSAATAYYGA 97 (243)
T ss_dssp --------------------CCTTHHHHHTTC-TT---CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhCHHHHHHHHHHHHHhC-cc---cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCcchHHHHHH
Confidence 46788999999999999999999999999999 76 789999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCHHHHHHHHHHHHhhCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CCCChhHHHHHHHHH
Q psy4703 88 CQAYEAIGKFEEAYTDAKHIHRVEPTNKAIQPVLSRLFAIVTKRMQENEQLQNKVHNMFKYVFD-TSAPMDKRVTAVNNL 166 (401)
Q Consensus 88 a~a~~~lg~~eeA~~~~~kal~l~P~~~~~~~~L~~l~~~~~~~~~a~~~~~~~~~~~~~~~~~-~~~~~~~~~~a~~~L 166 (401)
|.++..+|++++|+..|+++++++|.+..+...++.++...++..++.. +++.+.. .+.+.......+..+
T Consensus 98 a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~--------~~~~~~~~~~~~~~~~~~l~~~~ 169 (243)
T 2q7f_A 98 GNVYVVKEMYKEAKDMFEKALRAGMENGDLFYMLGTVLVKLEQPKLALP--------YLQRAVELNENDTEARFQFGMCL 169 (243)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHTCCSHHHHHHHHHHHHHTSCHHHHHH--------HHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhccHHHHHH--------HHHHHHHhCCccHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999888877754444 6666666 455666666666677
Q ss_pred HHhhhcchhhHHHhhhhHHHHHHHHhhc-cCchhHHhhH--HHHHHHHHHhcHHHHHHHHcCCChhHHH
Q psy4703 167 VVLAREMSGAEMLLKSGVAKQINTLLKC-ETNEEIYLGE--EDFITSIIKQGVDILKRLYMSKNENIRV 232 (401)
Q Consensus 167 ~~l~~~~~gae~~~~e~~v~~L~~ll~~-~~~~e~~lA~--e~fi~~i~~~gv~~Lk~l~~s~~d~i~~ 232 (401)
...++.+.+...+ .+.++. ..+++..... -.+-.+....+...+++.++..++...+
T Consensus 170 ~~~~~~~~A~~~~---------~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~p~~~~~ 229 (243)
T 2q7f_A 170 ANEGMLDEALSQF---------AAVTEQDPGHADAFYNAGVTYAYKENREKALEMLDKAIDIQPDHMLA 229 (243)
T ss_dssp HHHTCCHHHHHHH---------HHHHHHCTTCHHHHHHHHHHHHHTTCTTHHHHHHHHHHHHCTTCHHH
T ss_pred HHcCCHHHHHHHH---------HHHHHhCcccHHHHHHHHHHHHHccCHHHHHHHHHHHHccCcchHHH
Confidence 7777754433322 222221 1223321111 1111233455677788877754444433
No 71
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=99.55 E-value=5.6e-14 Score=127.86 Aligned_cols=161 Identities=14% Similarity=0.165 Sum_probs=135.1
Q ss_pred hHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcCCCC----cchHHHHHHHHHHHHHcCCHHHHHHHHHHHHH-------
Q psy4703 7 NDYNKLKESGNSAFKQGDYETALDFYTKALKVTAEES----HERATCLKNRAAVYLKQNQNDKVIEDCSKSLE------- 75 (401)
Q Consensus 7 ~~a~~l~~~Gn~~~~~g~y~eAi~~y~~Al~l~~p~~----~~~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~------- 75 (401)
.++..+...|..++..|+|++|+.+|.+++++. |+. +....++.++|.+|..+|++++|+..++++++
T Consensus 36 ~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~ 114 (258)
T 3uq3_A 36 KDITYLNNRAAAEYEKGEYETAISTLNDAVEQG-REMRADYKVISKSFARIGNAYHKLGDLKKTIEYYQKSLTEHRTADI 114 (258)
T ss_dssp CCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH-HHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHHH
T ss_pred ccHHHHHHHHHHHHHcccHHHHHHHHHHHHHhC-cccccchHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHhcCchhHH
Confidence 456788999999999999999999999999998 541 11278999999999999999999999999999
Q ss_pred -------------------hCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCccHHHHHHHHHHHHHHHHHHHH
Q psy4703 76 -------------------IVPDDPKALFRRCQAYEAIGKFEEAYTDAKHIHRVEPTNKAIQPVLSRLFAIVTKRMQENE 136 (401)
Q Consensus 76 -------------------ldP~~~kA~~~~a~a~~~lg~~eeA~~~~~kal~l~P~~~~~~~~L~~l~~~~~~~~~a~~ 136 (401)
.+|.++.+++.+|.++...|++++|+..|+++++++|++..++..++.++...++..++..
T Consensus 115 ~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~ 194 (258)
T 3uq3_A 115 LTKLRNAEKELKKAEAEAYVNPEKAEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPEDARGYSNRAAALAKLMSFPEAIA 194 (258)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHhHHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHhCCHHHHHH
Confidence 6777889999999999999999999999999999999999999999999988887755444
Q ss_pred HHHHHHHHHHHHhhc-CCCChhHHHHHHHHHHHhhhcchhh
Q psy4703 137 QLQNKVHNMFKYVFD-TSAPMDKRVTAVNNLVVLAREMSGA 176 (401)
Q Consensus 137 ~~~~~~~~~~~~~~~-~~~~~~~~~~a~~~L~~l~~~~~ga 176 (401)
+|+.++. .|.........+..+..+++.+.+.
T Consensus 195 --------~~~~al~~~~~~~~~~~~l~~~~~~~g~~~~A~ 227 (258)
T 3uq3_A 195 --------DCNKAIEKDPNFVRAYIRKATAQIAVKEYASAL 227 (258)
T ss_dssp --------HHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHH
T ss_pred --------HHHHHHHhCHHHHHHHHHHHHHHHHHhhHHHHH
Confidence 6677766 5555666666677777777654433
No 72
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=99.55 E-value=4.4e-13 Score=127.51 Aligned_cols=162 Identities=15% Similarity=0.108 Sum_probs=141.7
Q ss_pred ccCChhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcCCCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC---
Q psy4703 2 IDNNMNDYNKLKESGNSAFKQGDYETALDFYTKALKVTAEESHERATCLKNRAAVYLKQNQNDKVIEDCSKSLEIVP--- 78 (401)
Q Consensus 2 i~~~p~~a~~l~~~Gn~~~~~g~y~eAi~~y~~Al~l~~p~~~~~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~ldP--- 78 (401)
++.+|.++..+...|..++..|+|++|+..|+++++++ |+ ...++..+|.+|...|++++|+..|+++++++|
T Consensus 30 l~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~-~~---~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~ 105 (359)
T 3ieg_A 30 VDGDPDNYIAYYRRATVFLAMGKSKAALPDLTKVIALK-MD---FTAARLQRGHLLLKQGKLDEAEDDFKKVLKSNPSEQ 105 (359)
T ss_dssp HHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC-TT---CHHHHHHHHHHHHHHTCHHHHHHHHHHHHTSCCCHH
T ss_pred HhhCcccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhC-CC---cchHHHHHHHHHHHcCChHHHHHHHHHHHhcCCccc
Confidence 45678899999999999999999999999999999999 76 789999999999999999999999999999999
Q ss_pred CCHHHHHHH------------HHHHHHcCCHHHHHHHHHHHHhhCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy4703 79 DDPKALFRR------------CQAYEAIGKFEEAYTDAKHIHRVEPTNKAIQPVLSRLFAIVTKRMQENEQLQNKVHNMF 146 (401)
Q Consensus 79 ~~~kA~~~~------------a~a~~~lg~~eeA~~~~~kal~l~P~~~~~~~~L~~l~~~~~~~~~a~~~~~~~~~~~~ 146 (401)
+++.++..+ |.++...|++++|+..|+++++.+|++..++..++.++...++..++. .+|
T Consensus 106 ~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~--------~~~ 177 (359)
T 3ieg_A 106 EEKEAESQLVKADEMQRLRSQALDAFDGADYTAAITFLDKILEVCVWDAELRELRAECFIKEGEPRKAI--------SDL 177 (359)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHH--------HHH
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHCCCHHHHH--------HHH
Confidence 899998887 799999999999999999999999999999999999998888775544 367
Q ss_pred HHhhc-CCCChhHHHHHHHHHHHhhhcchh
Q psy4703 147 KYVFD-TSAPMDKRVTAVNNLVVLAREMSG 175 (401)
Q Consensus 147 ~~~~~-~~~~~~~~~~a~~~L~~l~~~~~g 175 (401)
+.+.. .|.+.......+..+...++.+.+
T Consensus 178 ~~~~~~~~~~~~~~~~la~~~~~~~~~~~A 207 (359)
T 3ieg_A 178 KAASKLKSDNTEAFYKISTLYYQLGDHELS 207 (359)
T ss_dssp HHHHTTCSCCHHHHHHHHHHHHHHTCHHHH
T ss_pred HHHHHhCCCCHHHHHHHHHHHHHcCCHHHH
Confidence 77777 556666667777777777775443
No 73
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=99.55 E-value=5.4e-13 Score=128.47 Aligned_cols=154 Identities=14% Similarity=0.153 Sum_probs=127.6
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcCCCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHH
Q psy4703 9 YNKLKESGNSAFKQGDYETALDFYTKALKVTAEESHERATCLKNRAAVYLKQNQNDKVIEDCSKSLEIVPDDPKALFRRC 88 (401)
Q Consensus 9 a~~l~~~Gn~~~~~g~y~eAi~~y~~Al~l~~p~~~~~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~ldP~~~kA~~~~a 88 (401)
+..+...|..++..|+|++|+.+|+++++.+ |+ +..++.++|.+|...|++++|+..|+++++++|+++.+++.+|
T Consensus 64 ~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~-p~---~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~l~ 139 (368)
T 1fch_A 64 HPQPFEEGLRRLQEGDLPNAVLLFEAAVQQD-PK---HMEAWQYLGTTQAENEQELLAISALRRCLELKPDNQTALMALA 139 (368)
T ss_dssp CSSHHHHHHHHHHTTCHHHHHHHHHHHHHSC-TT---CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred hHHHHHHHHHHHHCCCHHHHHHHHHHHHHhC-CC---CHHHHHHHHHHHHHCcCHHHHHHHHHHHHhcCCCCHHHHHHHH
Confidence 5678899999999999999999999999999 76 8899999999999999999999999999999999999999999
Q ss_pred HHHHHcCCHHHHHHHHHHHHhhCCCCccHHH----------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-
Q psy4703 89 QAYEAIGKFEEAYTDAKHIHRVEPTNKAIQP----------------VLSRLFAIVTKRMQENEQLQNKVHNMFKYVFD- 151 (401)
Q Consensus 89 ~a~~~lg~~eeA~~~~~kal~l~P~~~~~~~----------------~L~~l~~~~~~~~~a~~~~~~~~~~~~~~~~~- 151 (401)
.+|..+|++++|+..|++++.++|++..+.. .++.+. ..++.. .+..+|+.+..
T Consensus 140 ~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--------~A~~~~~~a~~~ 210 (368)
T 1fch_A 140 VSFTNESLQRQACEILRDWLRYTPAYAHLVTPAEEGAGGAGLGPSKRILGSLL-SDSLFL--------EVKELFLAAVRL 210 (368)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHTSTTTGGGCC---------------CTTHHHH-HHHHHH--------HHHHHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHHHHHhCcCcHHHHHHHHHHhhhhcccHHHHHHHHHh-hcccHH--------HHHHHHHHHHHh
Confidence 9999999999999999999999999877664 344444 444443 34446777776
Q ss_pred CCC--ChhHHHHHHHHHHHhhhcchh
Q psy4703 152 TSA--PMDKRVTAVNNLVVLAREMSG 175 (401)
Q Consensus 152 ~~~--~~~~~~~a~~~L~~l~~~~~g 175 (401)
.|. ........+..+...++.+.+
T Consensus 211 ~p~~~~~~~~~~l~~~~~~~g~~~~A 236 (368)
T 1fch_A 211 DPTSIDPDVQCGLGVLFNLSGEYDKA 236 (368)
T ss_dssp STTSCCHHHHHHHHHHHHHTTCHHHH
T ss_pred CcCcccHHHHHHHHHHHHHcCCHHHH
Confidence 444 455556666666666665443
No 74
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.54 E-value=9.1e-14 Score=137.84 Aligned_cols=152 Identities=19% Similarity=0.269 Sum_probs=127.2
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHhhcCCCCcc-hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q psy4703 13 KESGNSAFKQGDYETALDFYTKALKVTAEESHE-RATCLKNRAAVYLKQNQNDKVIEDCSKSLEIVPDDPKALFRRCQAY 91 (401)
Q Consensus 13 ~~~Gn~~~~~g~y~eAi~~y~~Al~l~~p~~~~-~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~ldP~~~kA~~~~a~a~ 91 (401)
...|..++..|++++|+.+|++++++. |+.+. ...++.++|.++.++|++++|+..|+++++++|+++.+++.+|.++
T Consensus 261 ~~~~~~~~~~g~~~~A~~~~~~~l~~~-p~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~ 339 (450)
T 2y4t_A 261 IESAEELIRDGRYTDATSKYESVMKTE-PSIAEYTVRSKERICHCFSKDEKPVEAIRVCSEVLQMEPDNVNALKDRAEAY 339 (450)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHC-CSSHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHhcC-CcchHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCcccHHHHHHHHHHH
Confidence 344999999999999999999999999 76222 2568999999999999999999999999999999999999999999
Q ss_pred HHcCCHHHHHHHHHHHHhhCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CCCChhHHHHHHHHHHHhh
Q psy4703 92 EAIGKFEEAYTDAKHIHRVEPTNKAIQPVLSRLFAIVTKRMQENEQLQNKVHNMFKYVFD-TSAPMDKRVTAVNNLVVLA 170 (401)
Q Consensus 92 ~~lg~~eeA~~~~~kal~l~P~~~~~~~~L~~l~~~~~~~~~a~~~~~~~~~~~~~~~~~-~~~~~~~~~~a~~~L~~l~ 170 (401)
..+|++++|+..|+++++++|+++.++..++.+....+... ..++|..+.. ...+.+.....++.+...+
T Consensus 340 ~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~---------~~~~y~~lg~~~~~~~~~~~~~y~~~~l~~ 410 (450)
T 2y4t_A 340 LIEEMYDEAIQDYETAQEHNENDQQIREGLEKAQRLLKQSQ---------KRDYYKILGVKRNAKKQEIIKAYRKLALQW 410 (450)
T ss_dssp HHTTCHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHHHHHH---------SCCSGGGSCSSTTCCTTHHHHHHHHHHHHS
T ss_pred HHhcCHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHhhccc---------chhHHHHhCCCccCCHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999988776655421 2234555554 3445567777888877777
Q ss_pred hcch
Q psy4703 171 REMS 174 (401)
Q Consensus 171 ~~~~ 174 (401)
+++.
T Consensus 411 ~pd~ 414 (450)
T 2y4t_A 411 HPDN 414 (450)
T ss_dssp CGGG
T ss_pred CCCC
Confidence 7753
No 75
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=99.54 E-value=3.4e-13 Score=129.82 Aligned_cols=160 Identities=12% Similarity=0.147 Sum_probs=116.7
Q ss_pred ccCChhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcCCCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC--
Q psy4703 2 IDNNMNDYNKLKESGNSAFKQGDYETALDFYTKALKVTAEESHERATCLKNRAAVYLKQNQNDKVIEDCSKSLEIVPD-- 79 (401)
Q Consensus 2 i~~~p~~a~~l~~~Gn~~~~~g~y~eAi~~y~~Al~l~~p~~~~~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~ldP~-- 79 (401)
++.+|.++..+...|..++..|++++|+.+|.++++++ |+ +..++.++|.+|..+|++++|+..+++++.++|.
T Consensus 91 l~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~-~~---~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~ 166 (368)
T 1fch_A 91 VQQDPKHMEAWQYLGTTQAENEQELLAISALRRCLELK-PD---NQTALMALAVSFTNESLQRQACEILRDWLRYTPAYA 166 (368)
T ss_dssp HHSCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TT---CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSTTTG
T ss_pred HHhCCCCHHHHHHHHHHHHHCcCHHHHHHHHHHHHhcC-CC---CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCcH
Confidence 45688899999999999999999999999999999999 76 7889999999999999998888888877776654
Q ss_pred -------------------------------------------------CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Q psy4703 80 -------------------------------------------------DPKALFRRCQAYEAIGKFEEAYTDAKHIHRV 110 (401)
Q Consensus 80 -------------------------------------------------~~kA~~~~a~a~~~lg~~eeA~~~~~kal~l 110 (401)
++.+++.+|.++...|++++|+..|++++++
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~ 246 (368)
T 1fch_A 167 HLVTPAEEGAGGAGLGPSKRILGSLLSDSLFLEVKELFLAAVRLDPTSIDPDVQCGLGVLFNLSGEYDKAVDCFTAALSV 246 (368)
T ss_dssp GGCC---------------CTTHHHHHHHHHHHHHHHHHHHHHHSTTSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhhhcccHHHHHHHHHhhcccHHHHHHHHHHHHHhCcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 4566666777777777777777777777777
Q ss_pred CCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CCCChhHHHHHHHHHHHhhhcc
Q psy4703 111 EPTNKAIQPVLSRLFAIVTKRMQENEQLQNKVHNMFKYVFD-TSAPMDKRVTAVNNLVVLAREM 173 (401)
Q Consensus 111 ~P~~~~~~~~L~~l~~~~~~~~~a~~~~~~~~~~~~~~~~~-~~~~~~~~~~a~~~L~~l~~~~ 173 (401)
+|++..++..++.++...++..++.. +|+.++. .|.........+..+...++.+
T Consensus 247 ~~~~~~~~~~l~~~~~~~g~~~~A~~--------~~~~al~~~~~~~~~~~~l~~~~~~~g~~~ 302 (368)
T 1fch_A 247 RPNDYLLWNKLGATLANGNQSEEAVA--------AYRRALELQPGYIRSRYNLGISCINLGAHR 302 (368)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHH--------HHHHHHHHCTTCHHHHHHHHHHHHHHTCHH
T ss_pred CcCCHHHHHHHHHHHHHcCCHHHHHH--------HHHHHHHhCCCcHHHHHHHHHHHHHCCCHH
Confidence 77766666666666666655543333 4455544 3444444455555555555543
No 76
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=99.54 E-value=9.8e-14 Score=144.01 Aligned_cols=131 Identities=13% Similarity=0.119 Sum_probs=120.1
Q ss_pred ccCChhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcCCCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH
Q psy4703 2 IDNNMNDYNKLKESGNSAFKQGDYETALDFYTKALKVTAEESHERATCLKNRAAVYLKQNQNDKVIEDCSKSLEIVPDDP 81 (401)
Q Consensus 2 i~~~p~~a~~l~~~Gn~~~~~g~y~eAi~~y~~Al~l~~p~~~~~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~ldP~~~ 81 (401)
++.+|+++..+...|..++..|+|++|+.+|+++++++ |+ +..++.++|.+|..+|++++|+..|+++++++|+++
T Consensus 16 l~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~-p~---~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~ 91 (568)
T 2vsy_A 16 VRHRPQDFVAWLMLADAELGMGDTTAGEMAVQRGLALH-PG---HPEAVARLGRVRWTQQRHAEAAVLLQQASDAAPEHP 91 (568)
T ss_dssp -----CCHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTS-TT---CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred HHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-CC---CHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCCH
Confidence 56789999999999999999999999999999999999 76 899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCccHHHHHHHHHHHH---HHHHHHHH
Q psy4703 82 KALFRRCQAYEAIGKFEEAYTDAKHIHRVEPTNKAIQPVLSRLFAIV---TKRMQENE 136 (401)
Q Consensus 82 kA~~~~a~a~~~lg~~eeA~~~~~kal~l~P~~~~~~~~L~~l~~~~---~~~~~a~~ 136 (401)
.+++++|.+|..+|++++|+..|+++++++|++..++..++.++... ++..++..
T Consensus 92 ~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~g~~~~A~~ 149 (568)
T 2vsy_A 92 GIALWLGHALEDAGQAEAAAAAYTRAHQLLPEEPYITAQLLNWRRRLCDWRALDVLSA 149 (568)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCTTHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhhccccHHHHHH
Confidence 99999999999999999999999999999999999999999999888 77655544
No 77
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=99.54 E-value=3.8e-13 Score=123.91 Aligned_cols=114 Identities=18% Similarity=0.076 Sum_probs=106.9
Q ss_pred ChhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcCCCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHH
Q psy4703 5 NMNDYNKLKESGNSAFKQGDYETALDFYTKALKVTAEESHERATCLKNRAAVYLKQNQNDKVIEDCSKSLEIVPDDPKAL 84 (401)
Q Consensus 5 ~p~~a~~l~~~Gn~~~~~g~y~eAi~~y~~Al~l~~p~~~~~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~ldP~~~kA~ 84 (401)
+|..+..+...|..++..|+|++|+.+|+++++++ |+ +..++.++|.+|...|+|++|+..|+++++++|.++.++
T Consensus 39 ~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~-~~---~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~~~~~~~~ 114 (275)
T 1xnf_A 39 DDERAQLLYERGVLYDSLGLRALARNDFSQALAIR-PD---MPEVFNYLGIYLTQAGNFDAAYEAFDSVLELDPTYNYAH 114 (275)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-CC---CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHH
T ss_pred CchhHHHHHHHHHHHHHcccHHHHHHHHHHHHHcC-CC---cHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCccccHHH
Confidence 46789999999999999999999999999999999 76 889999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHhhCCCCccHHHHHH
Q psy4703 85 FRRCQAYEAIGKFEEAYTDAKHIHRVEPTNKAIQPVLS 122 (401)
Q Consensus 85 ~~~a~a~~~lg~~eeA~~~~~kal~l~P~~~~~~~~L~ 122 (401)
+.+|.+|..+|++++|+..|+++++++|++......+.
T Consensus 115 ~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~ 152 (275)
T 1xnf_A 115 LNRGIALYYGGRDKLAQDDLLAFYQDDPNDPFRSLWLY 152 (275)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHHhCCCChHHHHHHH
Confidence 99999999999999999999999999999986555444
No 78
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=99.52 E-value=4.1e-14 Score=115.83 Aligned_cols=98 Identities=14% Similarity=0.192 Sum_probs=86.7
Q ss_pred HcCCHHHHHHHHHHHHhhcCCCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHH
Q psy4703 21 KQGDYETALDFYTKALKVTAEESHERATCLKNRAAVYLKQNQNDKVIEDCSKSLEIVPDDPKALFRRCQAYEAIGKFEEA 100 (401)
Q Consensus 21 ~~g~y~eAi~~y~~Al~l~~p~~~~~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~ldP~~~kA~~~~a~a~~~lg~~eeA 100 (401)
..|+|++|+.+|++++++. ++.|.+..+++++|.+|+.+|+|++|+..|+++++++|+++.+++++|.++..+|++++|
T Consensus 2 ~~g~~~~A~~~~~~al~~~-~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A 80 (117)
T 3k9i_A 2 VLGLEAQAVPYYEKAIASG-LQGKDLAECYLGLGSTFRTLGEYRKAEAVLANGVKQFPNHQALRVFYAMVLYNLGRYEQG 80 (117)
T ss_dssp -----CCCHHHHHHHHSSC-CCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHH
T ss_pred CCCcHHHHHHHHHHHHHcC-CCCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHcCCHHHH
Confidence 4689999999999999994 333558999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhCCCCccHHH
Q psy4703 101 YTDAKHIHRVEPTNKAIQP 119 (401)
Q Consensus 101 ~~~~~kal~l~P~~~~~~~ 119 (401)
+..|+++++.+|+++.+..
T Consensus 81 ~~~~~~al~~~p~~~~~~~ 99 (117)
T 3k9i_A 81 VELLLKIIAETSDDETIQS 99 (117)
T ss_dssp HHHHHHHHHHHCCCHHHHH
T ss_pred HHHHHHHHHhCCCcHHHHH
Confidence 9999999999999987644
No 79
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=99.51 E-value=5.5e-13 Score=108.13 Aligned_cols=123 Identities=27% Similarity=0.397 Sum_probs=113.1
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhhcCCCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q psy4703 10 NKLKESGNSAFKQGDYETALDFYTKALKVTAEESHERATCLKNRAAVYLKQNQNDKVIEDCSKSLEIVPDDPKALFRRCQ 89 (401)
Q Consensus 10 ~~l~~~Gn~~~~~g~y~eAi~~y~~Al~l~~p~~~~~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~ldP~~~kA~~~~a~ 89 (401)
..+...|..++..|++++|+..|.++++.. |+ ....+.++|.++...|++++|+..+++++..+|.++.+++.+|.
T Consensus 2 ~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~-~~---~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~ 77 (136)
T 2fo7_A 2 EAWYNLGNAYYKQGDYDEAIEYYQKALELD-PR---SAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGN 77 (136)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHC-TT---CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred cHHHHHHHHHHHcCcHHHHHHHHHHHHHcC-Cc---chhHHHHHHHHHHHhcCHHHHHHHHHHHHHHCCCchHHHHHHHH
Confidence 467889999999999999999999999999 76 78899999999999999999999999999999999999999999
Q ss_pred HHHHcCCHHHHHHHHHHHHhhCCCCccHHHHHHHHHHHHHHHHHHHH
Q psy4703 90 AYEAIGKFEEAYTDAKHIHRVEPTNKAIQPVLSRLFAIVTKRMQENE 136 (401)
Q Consensus 90 a~~~lg~~eeA~~~~~kal~l~P~~~~~~~~L~~l~~~~~~~~~a~~ 136 (401)
++...|++++|+..+++++...|.+..+...++.++...++..++..
T Consensus 78 ~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~ 124 (136)
T 2fo7_A 78 AYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQGDYDEAIE 124 (136)
T ss_dssp HHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCHHHHHH
T ss_pred HHHHhcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHccHHHHHH
Confidence 99999999999999999999999999888888888877776654433
No 80
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.51 E-value=9.5e-14 Score=148.17 Aligned_cols=155 Identities=12% Similarity=0.021 Sum_probs=135.3
Q ss_pred cCChhHHHHHHHHHHHHHHcCCHHHHHHHHHHHH--------hhcCCCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q psy4703 3 DNNMNDYNKLKESGNSAFKQGDYETALDFYTKAL--------KVTAEESHERATCLKNRAAVYLKQNQNDKVIEDCSKSL 74 (401)
Q Consensus 3 ~~~p~~a~~l~~~Gn~~~~~g~y~eAi~~y~~Al--------~l~~p~~~~~~~~~~n~a~~y~klg~y~~Ai~~~~kAL 74 (401)
..+|.++.++...| +..|++++|+..|++++ +.+ |+ +..+++++|.+|+.+|+|++|+..|++++
T Consensus 388 ~~~p~~~~a~~~~a---~~~~~~~~A~~~~~~al~~~~~~~~~~~-p~---~~~~~~~~a~~~~~~g~~~~A~~~~~~al 460 (681)
T 2pzi_A 388 LVDPTDVAASVLQA---TVLSQPVQTLDSLRAARHGALDADGVDF-SE---SVELPLMEVRALLDLGDVAKATRKLDDLA 460 (681)
T ss_dssp CCCTTSTTHHHHHH---TTTCCHHHHHHHHHHHHTC-------CC-TT---CSHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred cCCCCCcchHHhhc---ccccCHHHHHHHHHHhhhhccccccccc-cc---chhHHHHHHHHHHhcCCHHHHHHHHHHHh
Confidence 35677777777666 88999999999999999 888 66 88899999999999999999999999999
Q ss_pred HhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CC
Q psy4703 75 EIVPDDPKALFRRCQAYEAIGKFEEAYTDAKHIHRVEPTNKAIQPVLSRLFAIVTKRMQENEQLQNKVHNMFKYVFD-TS 153 (401)
Q Consensus 75 ~ldP~~~kA~~~~a~a~~~lg~~eeA~~~~~kal~l~P~~~~~~~~L~~l~~~~~~~~~a~~~~~~~~~~~~~~~~~-~~ 153 (401)
+++|+++.+|+.+|.+|..+|+|++|+.+|+++++++|++..++..++.++...++..+ ..+|+.++. .|
T Consensus 461 ~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~~lg~~~~~~g~~~~---------~~~~~~al~~~P 531 (681)
T 2pzi_A 461 ERVGWRWRLVWYRAVAELLTGDYDSATKHFTEVLDTFPGELAPKLALAATAELAGNTDE---------HKFYQTVWSTND 531 (681)
T ss_dssp HHHCCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCSHHHHHHHHHHHHHTCCCT---------TCHHHHHHHHCT
T ss_pred ccCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHcCChHH---------HHHHHHHHHhCC
Confidence 99999999999999999999999999999999999999999999999999988887643 346788877 66
Q ss_pred CChhHHHHHHHHHHHhhhcc
Q psy4703 154 APMDKRVTAVNNLVVLAREM 173 (401)
Q Consensus 154 ~~~~~~~~a~~~L~~l~~~~ 173 (401)
.+..........+..+++.+
T Consensus 532 ~~~~a~~~lg~~~~~~g~~~ 551 (681)
T 2pzi_A 532 GVISAAFGLARARSAEGDRV 551 (681)
T ss_dssp TCHHHHHHHHHHHHHTTCHH
T ss_pred chHHHHHHHHHHHHHcCCHH
Confidence 77777777777777777753
No 81
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=99.51 E-value=2.4e-13 Score=125.54 Aligned_cols=142 Identities=11% Similarity=0.021 Sum_probs=121.2
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcCCCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC----HHHH
Q psy4703 9 YNKLKESGNSAFKQGDYETALDFYTKALKVTAEESHERATCLKNRAAVYLKQNQNDKVIEDCSKSLEIVPDD----PKAL 84 (401)
Q Consensus 9 a~~l~~~Gn~~~~~g~y~eAi~~y~~Al~l~~p~~~~~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~ldP~~----~kA~ 84 (401)
.+.+...|..++..|+|++|+..|+++++.+ |+ +..++.++|.+|+.+|+|++|+..|+++++ .|.+ ..++
T Consensus 3 ~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~-p~---~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~-~~~~~~~~~~~~ 77 (272)
T 3u4t_A 3 DDVEFRYADFLFKNNNYAEAIEVFNKLEAKK-YN---SPYIYNRRAVCYYELAKYDLAQKDIETYFS-KVNATKAKSADF 77 (272)
T ss_dssp --CHHHHHHHHHTTTCHHHHHHHHHHHHHTT-CC---CSTTHHHHHHHHHHTTCHHHHHHHHHHHHT-TSCTTTCCHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhC-CC---cHHHHHHHHHHHHHHhhHHHHHHHHHHHHh-ccCchhHHHHHH
Confidence 4567899999999999999999999999999 76 677899999999999999999999999999 4433 5569
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHhhCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CCCChhHHHHHH
Q psy4703 85 FRRCQAYEAIGKFEEAYTDAKHIHRVEPTNKAIQPVLSRLFAIVTKRMQENEQLQNKVHNMFKYVFD-TSAPMDKRVTAV 163 (401)
Q Consensus 85 ~~~a~a~~~lg~~eeA~~~~~kal~l~P~~~~~~~~L~~l~~~~~~~~~a~~~~~~~~~~~~~~~~~-~~~~~~~~~~a~ 163 (401)
+.+|.++..+|++++|+..|+++++++|++..++..++.++...++..++ ..+|+.++. .|..........
T Consensus 78 ~~lg~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A--------~~~~~~al~~~~~~~~~~~~l~ 149 (272)
T 3u4t_A 78 EYYGKILMKKGQDSLAIQQYQAAVDRDTTRLDMYGQIGSYFYNKGNFPLA--------IQYMEKQIRPTTTDPKVFYELG 149 (272)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCHHHH--------HHHHGGGCCSSCCCHHHHHHHH
T ss_pred HHHHHHHHHcccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHccCHHHH--------HHHHHHHhhcCCCcHHHHHHHH
Confidence 99999999999999999999999999999999999999999988887544 447888887 444444444433
No 82
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=99.50 E-value=2.1e-12 Score=121.53 Aligned_cols=157 Identities=10% Similarity=0.046 Sum_probs=127.1
Q ss_pred hHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcCCCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHH
Q psy4703 7 NDYNKLKESGNSAFKQGDYETALDFYTKALKVTAEESHERATCLKNRAAVYLKQNQNDKVIEDCSKSLEIVPDDPKALFR 86 (401)
Q Consensus 7 ~~a~~l~~~Gn~~~~~g~y~eAi~~y~~Al~l~~p~~~~~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~ldP~~~kA~~~ 86 (401)
.++..+...|..++..|+|++|+..|+++++.+ |+ +..++.++|.++...|++++|+..++++++++|.++.+++.
T Consensus 19 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~-~~---~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~ 94 (327)
T 3cv0_A 19 MYHENPMEEGLSMLKLANLAEAALAFEAVCQAA-PE---REEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVHAA 94 (327)
T ss_dssp GGSSCHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TT---CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred hhhHHHHHHHHHHHHhccHHHHHHHHHHHHHhC-CC---CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCcCCHHHHHH
Confidence 456778999999999999999999999999999 76 88999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHhhCCCCccHHHHH--------------HH-HHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q psy4703 87 RCQAYEAIGKFEEAYTDAKHIHRVEPTNKAIQPVL--------------SR-LFAIVTKRMQENEQLQNKVHNMFKYVFD 151 (401)
Q Consensus 87 ~a~a~~~lg~~eeA~~~~~kal~l~P~~~~~~~~L--------------~~-l~~~~~~~~~a~~~~~~~~~~~~~~~~~ 151 (401)
+|.++..+|++++|+..|+++++.+|++..+...+ +. ++...++.. .+..+++.+..
T Consensus 95 la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~A~~~~~~~~~ 166 (327)
T 3cv0_A 95 LAVSHTNEHNANAALASLRAWLLSQPQYEQLGSVNLQADVDIDDLNVQSEDFFFAAPNEYR--------ECRTLLHAALE 166 (327)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHTSTTTTTC--------------------CCTTSHHHHH--------HHHHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCCccHHHHHHHhHHHHHHHHHHHHHHhHHHHHcccHH--------HHHHHHHHHHh
Confidence 99999999999999999999999999998877666 33 334444443 34446677666
Q ss_pred -CCCChhHHHHHHHHHHHhhhcchh
Q psy4703 152 -TSAPMDKRVTAVNNLVVLAREMSG 175 (401)
Q Consensus 152 -~~~~~~~~~~a~~~L~~l~~~~~g 175 (401)
.|.+.......+..+...++.+.+
T Consensus 167 ~~~~~~~~~~~la~~~~~~~~~~~A 191 (327)
T 3cv0_A 167 MNPNDAQLHASLGVLYNLSNNYDSA 191 (327)
T ss_dssp HSTTCHHHHHHHHHHHHHTTCHHHH
T ss_pred hCCCCHHHHHHHHHHHHHhccHHHH
Confidence 555566666666667776765433
No 83
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=99.49 E-value=1.8e-13 Score=117.52 Aligned_cols=111 Identities=5% Similarity=-0.066 Sum_probs=101.7
Q ss_pred HHHHHHHHhhcCCCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q psy4703 29 LDFYTKALKVTAEESHERATCLKNRAAVYLKQNQNDKVIEDCSKSLEIVPDDPKALFRRCQAYEAIGKFEEAYTDAKHIH 108 (401)
Q Consensus 29 i~~y~~Al~l~~p~~~~~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~ldP~~~kA~~~~a~a~~~lg~~eeA~~~~~kal 108 (401)
-..|++++.++ |+ +...++++|.+++..|+|++|+..|++++.++|.++.+|+.+|.++..+|+|++|+.+|++++
T Consensus 7 ~~~~~~al~~~-p~---~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al 82 (148)
T 2vgx_A 7 GGTIAMLNEIS-SD---TLEQLYSLAFNQYQSGXYEDAHXVFQALCVLDHYDSRFFLGLGACRQAMGQYDLAIHSYSYGA 82 (148)
T ss_dssp CCSHHHHTTCC-HH---HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred hhhHHHHHcCC-Hh---hHHHHHHHHHHHHHcCChHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 34688999999 65 899999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q psy4703 109 RVEPTNKAIQPVLSRLFAIVTKRMQENEQLQNKVHNMFKYVFD 151 (401)
Q Consensus 109 ~l~P~~~~~~~~L~~l~~~~~~~~~a~~~~~~~~~~~~~~~~~ 151 (401)
.++|+++.++..++.++..+++..++.. +|+.++.
T Consensus 83 ~l~p~~~~~~~~lg~~~~~~g~~~~A~~--------~~~~al~ 117 (148)
T 2vgx_A 83 VMDIXEPRFPFHAAECLLQXGELAEAES--------GLFLAQE 117 (148)
T ss_dssp HHSTTCTHHHHHHHHHHHHTTCHHHHHH--------HHHHHHH
T ss_pred hcCCCCchHHHHHHHHHHHcCCHHHHHH--------HHHHHHH
Confidence 9999999999999999999998866554 5666665
No 84
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=99.49 E-value=7.2e-14 Score=121.99 Aligned_cols=100 Identities=19% Similarity=0.150 Sum_probs=90.4
Q ss_pred HHcCCHHHHHHHHHHHHhhcCCCCcchHHHHHHHHHHHHHcCCH----------HHHHHHHHHHHHhCCCCHHHHHHHHH
Q psy4703 20 FKQGDYETALDFYTKALKVTAEESHERATCLKNRAAVYLKQNQN----------DKVIEDCSKSLEIVPDDPKALFRRCQ 89 (401)
Q Consensus 20 ~~~g~y~eAi~~y~~Al~l~~p~~~~~~~~~~n~a~~y~klg~y----------~~Ai~~~~kAL~ldP~~~kA~~~~a~ 89 (401)
-+.+.|++|+..|+++++++ |+ ++.+|+++|.++..++++ ++|+..|++||+++|++..+|+++|.
T Consensus 13 ~r~~~feeA~~~~~~Ai~l~-P~---~aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~ldP~~~~A~~~LG~ 88 (158)
T 1zu2_A 13 DRILLFEQIRQDAENTYKSN-PL---DADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPKKDEAVWCIGN 88 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHHC-TT---CHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred HHHhHHHHHHHHHHHHHHHC-CC---CHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHhCcCcHHHHHHHHH
Confidence 34567999999999999999 77 899999999999999876 59999999999999999999999999
Q ss_pred HHHHcC-----------CHHHHHHHHHHHHhhCCCCccHHHHHHH
Q psy4703 90 AYEAIG-----------KFEEAYTDAKHIHRVEPTNKAIQPVLSR 123 (401)
Q Consensus 90 a~~~lg-----------~~eeA~~~~~kal~l~P~~~~~~~~L~~ 123 (401)
+|..+| +|++|+.+|++|++++|++......+..
T Consensus 89 ay~~lg~l~P~~~~a~g~~~eA~~~~~kAl~l~P~~~~y~~al~~ 133 (158)
T 1zu2_A 89 AYTSFAFLTPDETEAKHNFDLATQFFQQAVDEQPDNTHYLKSLEM 133 (158)
T ss_dssp HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred HHHHhcccCcchhhhhccHHHHHHHHHHHHHhCCCCHHHHHHHHH
Confidence 999885 8999999999999999999766555543
No 85
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.49 E-value=5.2e-13 Score=127.03 Aligned_cols=163 Identities=10% Similarity=-0.003 Sum_probs=140.8
Q ss_pred ChhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcCCCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHH
Q psy4703 5 NMNDYNKLKESGNSAFKQGDYETALDFYTKALKVTAEESHERATCLKNRAAVYLKQNQNDKVIEDCSKSLEIVPDDPKAL 84 (401)
Q Consensus 5 ~p~~a~~l~~~Gn~~~~~g~y~eAi~~y~~Al~l~~p~~~~~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~ldP~~~kA~ 84 (401)
-|.+...+...|..+...|++++|+..|+++++++ |+ +..+++++|.+|...|++++|+..+++++..+|+....+
T Consensus 113 lp~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~-P~---~~~a~~~la~~~~~~g~~~~A~~~l~~~~~~~p~~~~~~ 188 (287)
T 3qou_A 113 LPREEELXAQQAMQLMQESNYTDALPLLXDAWQLS-NQ---NGEIGLLLAETLIALNRSEDAEAVLXTIPLQDQDTRYQG 188 (287)
T ss_dssp SCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHT-TS---CHHHHHHHHHHHHHTTCHHHHHHHHTTSCGGGCSHHHHH
T ss_pred cCCchhhHHHHHHHHHhCCCHHHHHHHHHHHHHhC-Cc---chhHHHHHHHHHHHCCCHHHHHHHHHhCchhhcchHHHH
Confidence 36778899999999999999999999999999999 77 889999999999999999999999999999999888888
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHhhCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CCCC--hhHHHH
Q psy4703 85 FRRCQAYEAIGKFEEAYTDAKHIHRVEPTNKAIQPVLSRLFAIVTKRMQENEQLQNKVHNMFKYVFD-TSAP--MDKRVT 161 (401)
Q Consensus 85 ~~~a~a~~~lg~~eeA~~~~~kal~l~P~~~~~~~~L~~l~~~~~~~~~a~~~~~~~~~~~~~~~~~-~~~~--~~~~~~ 161 (401)
...+..+...+++++|+..|+++++.+|++..++..++.++...++..++.. .|..++. .|.. ...+..
T Consensus 189 ~~~~~~l~~~~~~~~a~~~l~~al~~~P~~~~~~~~la~~l~~~g~~~~A~~--------~l~~~l~~~p~~~~~~a~~~ 260 (287)
T 3qou_A 189 LVAQIELLXQAADTPEIQQLQQQVAENPEDAALATQLALQLHQVGRNEEALE--------LLFGHLRXDLTAADGQTRXT 260 (287)
T ss_dssp HHHHHHHHHHHTSCHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHH--------HHHHHHHHCTTGGGGHHHHH
T ss_pred HHHHHHHHhhcccCccHHHHHHHHhcCCccHHHHHHHHHHHHHcccHHHHHH--------HHHHHHhcccccccchHHHH
Confidence 8888889999999999999999999999999999999999999888765544 6677766 4444 456666
Q ss_pred HHHHHHHhhhcchhhHHH
Q psy4703 162 AVNNLVVLAREMSGAEML 179 (401)
Q Consensus 162 a~~~L~~l~~~~~gae~~ 179 (401)
....+..+++.+++...+
T Consensus 261 l~~~~~~~g~~~~a~~~~ 278 (287)
T 3qou_A 261 FQEILAALGTGDALASXY 278 (287)
T ss_dssp HHHHHHHHCTTCHHHHHH
T ss_pred HHHHHHHcCCCCcHHHHH
Confidence 666677777766555444
No 86
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=99.49 E-value=4.1e-14 Score=144.93 Aligned_cols=117 Identities=26% Similarity=0.456 Sum_probs=111.5
Q ss_pred ChhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcCCCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHH
Q psy4703 5 NMNDYNKLKESGNSAFKQGDYETALDFYTKALKVTAEESHERATCLKNRAAVYLKQNQNDKVIEDCSKSLEIVPDDPKAL 84 (401)
Q Consensus 5 ~p~~a~~l~~~Gn~~~~~g~y~eAi~~y~~Al~l~~p~~~~~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~ldP~~~kA~ 84 (401)
.++.+..+...|+.++..|+|++|+.+|++|++++ |+ +..++.++|.+|.++|+|++|+.+|+++++++|+++.++
T Consensus 2 ~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~~~-p~---~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~ 77 (477)
T 1wao_1 2 ALKRAEELKTQANDYFKAKDYENAIKFYSQAIELN-PS---NAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGY 77 (477)
T ss_dssp CHHHHTTSSSSSSSTTTTTCHHHHHHHHHHHHHHC-TT---CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCTTCHHHH
T ss_pred hHhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhC-Cc---cHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHHHH
Confidence 46678888999999999999999999999999999 76 899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHhhCCCCccHHHHHHHHH
Q psy4703 85 FRRCQAYEAIGKFEEAYTDAKHIHRVEPTNKAIQPVLSRLF 125 (401)
Q Consensus 85 ~~~a~a~~~lg~~eeA~~~~~kal~l~P~~~~~~~~L~~l~ 125 (401)
+++|.+|..+|++++|+..|+++++++|++..++..++.+.
T Consensus 78 ~~lg~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~l~~~~ 118 (477)
T 1wao_1 78 YRRAASNMALGKFRAALRDYETVVKVKPHDKDAKMKYQECN 118 (477)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHSTTCTTHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999888873
No 87
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=99.48 E-value=2.3e-13 Score=119.36 Aligned_cols=162 Identities=13% Similarity=0.041 Sum_probs=130.0
Q ss_pred ChhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcCCCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHH
Q psy4703 5 NMNDYNKLKESGNSAFKQGDYETALDFYTKALKVTAEESHERATCLKNRAAVYLKQNQNDKVIEDCSKSLEIVPDDPKAL 84 (401)
Q Consensus 5 ~p~~a~~l~~~Gn~~~~~g~y~eAi~~y~~Al~l~~p~~~~~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~ldP~~~kA~ 84 (401)
||...+.+...|..++..|++++|+..|+++++.+ |+ +..+++++|.+|...|++++|+..+++++..+| ++..+
T Consensus 2 ~~~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~-P~---~~~a~~~la~~~~~~g~~~~A~~~~~~a~~~~p-~~~~~ 76 (176)
T 2r5s_A 2 NASPDEQLLKQVSELLQQGEHAQALNVIQTLSDEL-QS---RGDVKLAKADCLLETKQFELAQELLATIPLEYQ-DNSYK 76 (176)
T ss_dssp ----CTTHHHHHHHHHHTTCHHHHHHHHHTSCHHH-HT---SHHHHHHHHHHHHHTTCHHHHHHHHTTCCGGGC-CHHHH
T ss_pred CCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHC-CC---cHHHHHHHHHHHHHCCCHHHHHHHHHHhhhccC-ChHHH
Confidence 56666788999999999999999999999999999 76 899999999999999999999999999999999 88777
Q ss_pred HHHHHHHH-HcCCHHHHHHHHHHHHhhCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCC---hhHHH
Q psy4703 85 FRRCQAYE-AIGKFEEAYTDAKHIHRVEPTNKAIQPVLSRLFAIVTKRMQENEQLQNKVHNMFKYVFDTSAP---MDKRV 160 (401)
Q Consensus 85 ~~~a~a~~-~lg~~eeA~~~~~kal~l~P~~~~~~~~L~~l~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~---~~~~~ 160 (401)
..++.+.. ..+...+|+..|+++++++|+++.++..++.++...++..++.. +|+.++...++ .....
T Consensus 77 ~~~~~~~~~~~~~~~~a~~~~~~al~~~P~~~~~~~~la~~~~~~g~~~~A~~--------~~~~~l~~~p~~~~~~a~~ 148 (176)
T 2r5s_A 77 SLIAKLELHQQAAESPELKRLEQELAANPDNFELACELAVQYNQVGRDEEALE--------LLWNILKVNLGAQDGEVKK 148 (176)
T ss_dssp HHHHHHHHHHHHTSCHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHH--------HHHHHHTTCTTTTTTHHHH
T ss_pred HHHHHHHHHhhcccchHHHHHHHHHHhCCCCHHHHHHHHHHHHHcccHHHHHH--------HHHHHHHhCcccChHHHHH
Confidence 66665533 33445568999999999999999999999999999888765544 77777774332 34566
Q ss_pred HHHHHHHHhhhcchhhHHH
Q psy4703 161 TAVNNLVVLAREMSGAEML 179 (401)
Q Consensus 161 ~a~~~L~~l~~~~~gae~~ 179 (401)
.....+..+|+.+++...+
T Consensus 149 ~l~~~~~~~g~~~~A~~~y 167 (176)
T 2r5s_A 149 TFMDILSALGQGNAIASKY 167 (176)
T ss_dssp HHHHHHHHHCSSCHHHHHH
T ss_pred HHHHHHHHhCCCCcHHHHH
Confidence 6667777777766555444
No 88
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=99.48 E-value=3.7e-13 Score=112.41 Aligned_cols=111 Identities=15% Similarity=0.158 Sum_probs=90.4
Q ss_pred chHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCccHHHHHHHH
Q psy4703 45 ERATCLKNRAAVYLKQNQNDKVIEDCSKSLEIVPDDPKALFRRCQAYEAIGKFEEAYTDAKHIHRVEPTNKAIQPVLSRL 124 (401)
Q Consensus 45 ~~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~ldP~~~kA~~~~a~a~~~lg~~eeA~~~~~kal~l~P~~~~~~~~L~~l 124 (401)
+.+.++.++|.++++.|+|++|+.+|++||+++|+++.+|+++|.+|..+|+|++|+.+|+++++++|++......++.+
T Consensus 6 d~A~a~~~lG~~~~~~~~~~~A~~~y~~Al~~~p~~~~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~a~~ 85 (127)
T 4gcn_A 6 DAAIAEKDLGNAAYKQKDFEKAHVHYDKAIELDPSNITFYNNKAAVYFEEKKFAECVQFCEKAVEVGRETRADYKLIAKA 85 (127)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHhHHHHHHHhhhHHHHHHHHHHHHHhCcccchhhHHHHHH
Confidence 47889999999999999999999999999999999999999999999999999999999999999999887766666666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCh
Q psy4703 125 FAIVTKRMQENEQLQNKVHNMFKYVFDTSAPM 156 (401)
Q Consensus 125 ~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~ 156 (401)
+..++........+ ..+..+|+.++...++.
T Consensus 86 ~~~lg~~~~~~~~~-~~A~~~~~kal~~~~~~ 116 (127)
T 4gcn_A 86 MSRAGNAFQKQNDL-SLAVQWFHRSLSEFRDP 116 (127)
T ss_dssp HHHHHHHHHHTTCH-HHHHHHHHHHHHHSCCH
T ss_pred HHHHHHHHHHcCCH-HHHHHHHHHHHhhCcCH
Confidence 55555544433333 33445677777644443
No 89
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=99.48 E-value=4.5e-12 Score=128.29 Aligned_cols=212 Identities=11% Similarity=0.075 Sum_probs=160.5
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcCCCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHH
Q psy4703 9 YNKLKESGNSAFKQGDYETALDFYTKALKVTAEESHERATCLKNRAAVYLKQNQNDKVIEDCSKSLEIVPDDPKALFRRC 88 (401)
Q Consensus 9 a~~l~~~Gn~~~~~g~y~eAi~~y~~Al~l~~p~~~~~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~ldP~~~kA~~~~a 88 (401)
+..+...|..++..|++++|+..|.++++++ |+ ..++.++|.+|...|++++|+..|+++++.+|+++.+++.+|
T Consensus 243 ~~~~~~~g~~~~~~~~~~~A~~~~~~~~~~~-~~----~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~ 317 (537)
T 3fp2_A 243 ALALCYTGIFHFLKNNLLDAQVLLQESINLH-PT----PNSYIFLALTLADKENSQEFFKFFQKAVDLNPEYPPTYYHRG 317 (537)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-CC----HHHHHHHHHHTCCSSCCHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHhcccHHHHHHHHHHHHhcC-CC----chHHHHHHHHHHHhcCHHHHHHHHHHHhccCCCCHHHHHHHH
Confidence 5578899999999999999999999999999 64 788999999999999999999999999999999999999999
Q ss_pred HHHHHcCCHHHHHHHHHHHHhhCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CCCChhHHHHHHHHHH
Q psy4703 89 QAYEAIGKFEEAYTDAKHIHRVEPTNKAIQPVLSRLFAIVTKRMQENEQLQNKVHNMFKYVFD-TSAPMDKRVTAVNNLV 167 (401)
Q Consensus 89 ~a~~~lg~~eeA~~~~~kal~l~P~~~~~~~~L~~l~~~~~~~~~a~~~~~~~~~~~~~~~~~-~~~~~~~~~~a~~~L~ 167 (401)
.++..+|++++|+..|+++++++|++..++..++.++...++..++.. +|+.+.. .|.+..........+.
T Consensus 318 ~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~g~~~~A~~--------~~~~~~~~~~~~~~~~~~l~~~~~ 389 (537)
T 3fp2_A 318 QMYFILQDYKNAKEDFQKAQSLNPENVYPYIQLACLLYKQGKFTESEA--------FFNETKLKFPTLPEVPTFFAEILT 389 (537)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCTTCSHHHHHHHHHHHHTTCHHHHHH--------HHHHHHHHCTTCTHHHHHHHHHHH
T ss_pred HHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHH--------HHHHHHHhCCCChHHHHHHHHHHH
Confidence 999999999999999999999999999999999999998888755544 6666666 5666666677777777
Q ss_pred HhhhcchhhHHHhhhhHHHHHHHHhhccCchhHHhh------HHHHHH----------HHHHhcHHHHHHHHcCCChhHH
Q psy4703 168 VLAREMSGAEMLLKSGVAKQINTLLKCETNEEIYLG------EEDFIT----------SIIKQGVDILKRLYMSKNENIR 231 (401)
Q Consensus 168 ~l~~~~~gae~~~~e~~v~~L~~ll~~~~~~e~~lA------~e~fi~----------~i~~~gv~~Lk~l~~s~~d~i~ 231 (401)
..++.+.+...+ .. ...+.....+....++ .-.+-. +..+.+...+.+.+...++...
T Consensus 390 ~~g~~~~A~~~~-~~-----a~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~ 463 (537)
T 3fp2_A 390 DRGDFDTAIKQY-DI-----AKRLEEVQEKIHVGIGPLIGKATILARQSSQDPTQLDEEKFNAAIKLLTKACELDPRSEQ 463 (537)
T ss_dssp HTTCHHHHHHHH-HH-----HHHHHHHCSSCSSTTHHHHHHHHHHHHHHTC----CCHHHHHHHHHHHHHHHHHCTTCHH
T ss_pred HhCCHHHHHHHH-HH-----HHHcCCcchhhHHHHHHHHHHHHHHHHHhhccchhhhHhHHHHHHHHHHHHHHhCCCCHH
Confidence 777765443333 11 1111110111111111 111113 6677888999999886555554
Q ss_pred HHHHHhhh
Q psy4703 232 VRALVGLC 239 (401)
Q Consensus 232 ~ralvgLc 239 (401)
+....|.|
T Consensus 464 ~~~~l~~~ 471 (537)
T 3fp2_A 464 AKIGLAQL 471 (537)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 44444444
No 90
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=99.47 E-value=3e-12 Score=131.80 Aligned_cols=208 Identities=8% Similarity=-0.007 Sum_probs=152.9
Q ss_pred cCChhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcCCCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH
Q psy4703 3 DNNMNDYNKLKESGNSAFKQGDYETALDFYTKALKVTAEESHERATCLKNRAAVYLKQNQNDKVIEDCSKSLEIVPDDPK 82 (401)
Q Consensus 3 ~~~p~~a~~l~~~Gn~~~~~g~y~eAi~~y~~Al~l~~p~~~~~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~ldP~~~k 82 (401)
...|.++..+...|..+.+.|++++|+.+|+++++++ |+ +..+|..++.+|.+.|++++|+..|+++++.+|+++.
T Consensus 367 ~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~-~~---~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~ 442 (597)
T 2xpi_A 367 DRHPEKAVTWLAVGIYYLCVNKISEARRYFSKSSTMD-PQ---FGPAWIGFAHSFAIEGEHDQAISAYTTAARLFQGTHL 442 (597)
T ss_dssp HHCTTSHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TT---CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTTTCSH
T ss_pred hhCcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHhC-CC---CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchH
Confidence 4467788899999999999999999999999999999 76 7889999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC------CCC-
Q psy4703 83 ALFRRCQAYEAIGKFEEAYTDAKHIHRVEPTNKAIQPVLSRLFAIVTKRMQENEQLQNKVHNMFKYVFDT------SAP- 155 (401)
Q Consensus 83 A~~~~a~a~~~lg~~eeA~~~~~kal~l~P~~~~~~~~L~~l~~~~~~~~~a~~~~~~~~~~~~~~~~~~------~~~- 155 (401)
+++.+|.+|...|++++|+..|+++++++|.++.++..++.++...++..++.. +|+.+... .++
T Consensus 443 ~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~--------~~~~~~~~~~~~~~~p~~ 514 (597)
T 2xpi_A 443 PYLFLGMQHMQLGNILLANEYLQSSYALFQYDPLLLNELGVVAFNKSDMQTAIN--------HFQNALLLVKKTQSNEKP 514 (597)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHH--------HHHHHHHHHHHSCCCSGG
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCCHHHHHH--------HHHHHHHhhhccccchhh
Confidence 999999999999999999999999999999999999999999888887766555 44444331 222
Q ss_pred -hhHHHHHHHHHHHhhhcchhhHHHhhhhHHHHHHHHhhcc-CchhHHhhHH--HHHHHHHHhcHHHHHHHHcCCChhHH
Q psy4703 156 -MDKRVTAVNNLVVLAREMSGAEMLLKSGVAKQINTLLKCE-TNEEIYLGEE--DFITSIIKQGVDILKRLYMSKNENIR 231 (401)
Q Consensus 156 -~~~~~~a~~~L~~l~~~~~gae~~~~e~~v~~L~~ll~~~-~~~e~~lA~e--~fi~~i~~~gv~~Lk~l~~s~~d~i~ 231 (401)
..........+...++.+.+. ..+.++++.. .++....... .+-.+..+.+..+++++++..++...
T Consensus 515 ~~~~~~~l~~~~~~~g~~~~A~---------~~~~~~~~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~~l~~~p~~~~ 585 (597)
T 2xpi_A 515 WAATWANLGHAYRKLKMYDAAI---------DALNQGLLLSTNDANVHTAIALVYLHKKIPGLAITHLHESLAISPNEIM 585 (597)
T ss_dssp GHHHHHHHHHHHHHTTCHHHHH---------HHHHHHHHHSSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH
T ss_pred HHHHHHHHHHHHHHhcCHHHHH---------HHHHHHHHhCCCChHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCChH
Confidence 344455555556666643332 2223333321 2333321111 11133456677888888875554443
No 91
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=99.47 E-value=1.1e-12 Score=119.77 Aligned_cols=135 Identities=12% Similarity=0.152 Sum_probs=116.9
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcCCCCcchHHHHHHHHHHHHH------------------cCCHHHHHHH
Q psy4703 8 DYNKLKESGNSAFKQGDYETALDFYTKALKVTAEESHERATCLKNRAAVYLK------------------QNQNDKVIED 69 (401)
Q Consensus 8 ~a~~l~~~Gn~~~~~g~y~eAi~~y~~Al~l~~p~~~~~~~~~~n~a~~y~k------------------lg~y~~Ai~~ 69 (401)
...++...|..++..|+|++|+..|+++++.. |+.+....+++++|.+|.. .|++++|+..
T Consensus 40 ~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~-P~~~~~~~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~ 118 (225)
T 2yhc_A 40 SQQVQLDLIYAYYKNADLPLAQAAIDRFIRLN-PTHPNIDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQQARAAFSD 118 (225)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCTTHHHHHHHHHHHHHHHHC--------------CCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHC-cCCCcHHHHHHHHHHHHHhhhhhhhhhhhccchhhcCcHHHHHHHHH
Confidence 35789999999999999999999999999999 8766666789999999987 5799999999
Q ss_pred HHHHHHhCCCCHHHH-----------------HHHHHHHHHcCCHHHHHHHHHHHHhhCCCCc---cHHHHHHHHHHHHH
Q psy4703 70 CSKSLEIVPDDPKAL-----------------FRRCQAYEAIGKFEEAYTDAKHIHRVEPTNK---AIQPVLSRLFAIVT 129 (401)
Q Consensus 70 ~~kAL~ldP~~~kA~-----------------~~~a~a~~~lg~~eeA~~~~~kal~l~P~~~---~~~~~L~~l~~~~~ 129 (401)
|+++++.+|+++.+. +.+|.+|...|+|++|+..|+++++..|+++ .++..++.++..++
T Consensus 119 ~~~~l~~~P~~~~a~~a~~~l~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~l~~~~~~~g 198 (225)
T 2yhc_A 119 FSKLVRGYPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTERGAWVAVVNRVEGMLRDYPDTQATRDALPLMENAYRQMQ 198 (225)
T ss_dssp HHHHHTTCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTSHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHCcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHCcCCCccHHHHHHHHHHHHHcC
Confidence 999999999987654 6789999999999999999999999999986 56777888888777
Q ss_pred HHHHHHHHHHHHHHHHHHHhhc
Q psy4703 130 KRMQENEQLQNKVHNMFKYVFD 151 (401)
Q Consensus 130 ~~~~a~~~~~~~~~~~~~~~~~ 151 (401)
+...+. ++++++..
T Consensus 199 ~~~~A~--------~~~~~l~~ 212 (225)
T 2yhc_A 199 MNAQAE--------KVAKIIAA 212 (225)
T ss_dssp CHHHHH--------HHHHHHHH
T ss_pred CcHHHH--------HHHHHHHh
Confidence 775443 36676666
No 92
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=99.46 E-value=3.2e-12 Score=127.78 Aligned_cols=158 Identities=13% Similarity=0.036 Sum_probs=122.5
Q ss_pred hHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcC-----CCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC----
Q psy4703 7 NDYNKLKESGNSAFKQGDYETALDFYTKALKVTA-----EESHERATCLKNRAAVYLKQNQNDKVIEDCSKSLEIV---- 77 (401)
Q Consensus 7 ~~a~~l~~~Gn~~~~~g~y~eAi~~y~~Al~l~~-----p~~~~~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~ld---- 77 (401)
..+..+...|..++..|+|++|+++|++|+++.+ ...+.....|.|+|.+|..+|+|++|+.++++++++.
T Consensus 49 ~~a~~yn~Lg~~~~~~G~~~eAl~~~~kAl~~~~~~~~~~~~~~~~~~~~nla~~y~~~g~~~~A~~~~~ka~~i~~~~~ 128 (472)
T 4g1t_A 49 FKATMCNLLAYLKHLKGQNEAALECLRKAEELIQQEHADQAEIRSLVTWGNYAWVYYHMGRLSDVQIYVDKVKHVCEKFS 128 (472)
T ss_dssp -CCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSGGGCTTTTHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSC
T ss_pred hHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhcCccccchHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHhHhcc
Confidence 3466788899999999999999999999998741 1124478899999999999999999999999999873
Q ss_pred ----CCCHHHHHHHHHHHHHcC--CHHHHHHHHHHHHhhCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q psy4703 78 ----PDDPKALFRRCQAYEAIG--KFEEAYTDAKHIHRVEPTNKAIQPVLSRLFAIVTKRMQENEQLQNKVHNMFKYVFD 151 (401)
Q Consensus 78 ----P~~~kA~~~~a~a~~~lg--~~eeA~~~~~kal~l~P~~~~~~~~L~~l~~~~~~~~~a~~~~~~~~~~~~~~~~~ 151 (401)
+..+.++..+|.++..+| +|++|+.+|+++++++|+++.+...++.+...++...+. ..+.+.|++++.
T Consensus 129 ~~~~~~~~~~~~~~g~~~~~~~~~~y~~A~~~~~kal~~~p~~~~~~~~~~~~~~~l~~~~~~-----~~al~~~~~al~ 203 (472)
T 4g1t_A 129 SPYRIESPELDCEEGWTRLKCGGNQNERAKVCFEKALEKKPKNPEFTSGLAIASYRLDNWPPS-----QNAIDPLRQAIR 203 (472)
T ss_dssp CSSCCCCHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHSCCC-----CCTHHHHHHHHH
T ss_pred cccchhhHHHHHHHHHHHHHHccccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCchHH-----HHHHHHHHHHhh
Confidence 456889999999988765 699999999999999999999999988887666544322 123446777776
Q ss_pred -CCCChhHHHHHHHHHHHh
Q psy4703 152 -TSAPMDKRVTAVNNLVVL 169 (401)
Q Consensus 152 -~~~~~~~~~~a~~~L~~l 169 (401)
.|............+..+
T Consensus 204 l~p~~~~~~~~l~~~~~~~ 222 (472)
T 4g1t_A 204 LNPDNQYLKVLLALKLHKM 222 (472)
T ss_dssp HCSSCHHHHHHHHHHHHHC
T ss_pred cCCcchHHHHHHHHHHHHH
Confidence 455555444444444333
No 93
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=99.45 E-value=3.2e-13 Score=117.75 Aligned_cols=128 Identities=10% Similarity=0.100 Sum_probs=110.3
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHhhcCCCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH-HHH
Q psy4703 15 SGNSAFKQGDYETALDFYTKALKVTAEESHERATCLKNRAAVYLKQNQNDKVIEDCSKSLEIVPDDPKALFRRCQA-YEA 93 (401)
Q Consensus 15 ~Gn~~~~~g~y~eAi~~y~~Al~l~~p~~~~~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~ldP~~~kA~~~~a~a-~~~ 93 (401)
.++.++..|+|++|+..|.+++..+ |+ +..+++.+|.+|+..|+|++|+..|.++++++|+++.+++.+|.+ +..
T Consensus 16 ~~~~~~~~~~~~~A~~~~~~al~~~-p~---~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~l~~~ 91 (177)
T 2e2e_A 16 PLHQFASQQNPEAQLQALQDKIRAN-PQ---NSEQWALLGEYYLWQNDYSNSLLAYRQALQLRGENAELYAALATVLYYQ 91 (177)
T ss_dssp TTCCCC-----CCCCHHHHHHHHHC-CS---CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHCSCHHHHHHHHHHHHHH
T ss_pred hhhhhhhccCHHHHHHHHHHHHHhC-CC---cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHh
Confidence 3445677899999999999999999 76 889999999999999999999999999999999999999999999 889
Q ss_pred cCCH--HHHHHHHHHHHhhCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCC
Q psy4703 94 IGKF--EEAYTDAKHIHRVEPTNKAIQPVLSRLFAIVTKRMQENEQLQNKVHNMFKYVFDTSA 154 (401)
Q Consensus 94 lg~~--eeA~~~~~kal~l~P~~~~~~~~L~~l~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~ 154 (401)
.|++ ++|+..|+++++++|++..++..++.++...++..++. .+|+.++...+
T Consensus 92 ~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~--------~~~~~al~~~p 146 (177)
T 2e2e_A 92 ASQHMTAQTRAMIDKALALDSNEITALMLLASDAFMQANYAQAI--------ELWQKVMDLNS 146 (177)
T ss_dssp TTTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHH--------HHHHHHHHTCC
T ss_pred cCCcchHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcccHHHHH--------HHHHHHHhhCC
Confidence 9999 99999999999999999999999999999888775444 46777777333
No 94
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=99.44 E-value=7.9e-12 Score=125.40 Aligned_cols=213 Identities=11% Similarity=0.019 Sum_probs=162.5
Q ss_pred ChhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcCCCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHH
Q psy4703 5 NMNDYNKLKESGNSAFKQGDYETALDFYTKALKVTAEESHERATCLKNRAAVYLKQNQNDKVIEDCSKSLEIVPDDPKAL 84 (401)
Q Consensus 5 ~p~~a~~l~~~Gn~~~~~g~y~eAi~~y~~Al~l~~p~~~~~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~ldP~~~kA~ 84 (401)
+|..+..+...|..++..|++++|+..|+++++.+ |+ ..++.++|.+|...|++++|+..+++++..+|.++.++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~-~~----~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~ 307 (514)
T 2gw1_A 233 KEKLAISLEHTGIFKFLKNDPLGAHEDIKKAIELF-PR----VNSYIYMALIMADRNDSTEYYNYFDKALKLDSNNSSVY 307 (514)
T ss_dssp HHHHHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHC-CC----HHHHHHHHHHHHTSSCCTTGGGHHHHHHTTCTTCTHHH
T ss_pred ChHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhC-cc----HHHHHHHHHHHHHCCCHHHHHHHHHHHhhcCcCCHHHH
Confidence 37788999999999999999999999999999999 64 88999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHhhCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CCCChhHHHHHH
Q psy4703 85 FRRCQAYEAIGKFEEAYTDAKHIHRVEPTNKAIQPVLSRLFAIVTKRMQENEQLQNKVHNMFKYVFD-TSAPMDKRVTAV 163 (401)
Q Consensus 85 ~~~a~a~~~lg~~eeA~~~~~kal~l~P~~~~~~~~L~~l~~~~~~~~~a~~~~~~~~~~~~~~~~~-~~~~~~~~~~a~ 163 (401)
+.+|.++..+|++++|+..|+++++++|++..++..++.++...++..++.. +|+.+.. .|.+.......+
T Consensus 308 ~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~--------~~~~~~~~~~~~~~~~~~la 379 (514)
T 2gw1_A 308 YHRGQMNFILQNYDQAGKDFDKAKELDPENIFPYIQLACLAYRENKFDDCET--------LFSEAKRKFPEAPEVPNFFA 379 (514)
T ss_dssp HHHHHHHHHTTCTTHHHHHHHHHHHTCSSCSHHHHHHHHHTTTTTCHHHHHH--------HHHHHHHHSTTCSHHHHHHH
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHcCCHHHHHH--------HHHHHHHHcccCHHHHHHHH
Confidence 9999999999999999999999999999999999999999888877654443 5666666 555666667777
Q ss_pred HHHHHhhhcchhhHHHhhhhHHHHHHHHhhc-cCchh------H--HhhHHHHH---HHHHHhcHHHHHHHHcCCChhHH
Q psy4703 164 NNLVVLAREMSGAEMLLKSGVAKQINTLLKC-ETNEE------I--YLGEEDFI---TSIIKQGVDILKRLYMSKNENIR 231 (401)
Q Consensus 164 ~~L~~l~~~~~gae~~~~e~~v~~L~~ll~~-~~~~e------~--~lA~e~fi---~~i~~~gv~~Lk~l~~s~~d~i~ 231 (401)
..+...++.+.+...+ .+.+.. ..+++ . .++.-.+- .+..+.+...+.+.+...++...
T Consensus 380 ~~~~~~~~~~~A~~~~---------~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~ 450 (514)
T 2gw1_A 380 EILTDKNDFDKALKQY---------DLAIELENKLDGIYVGIAPLVGKATLLTRNPTVENFIEATNLLEKASKLDPRSEQ 450 (514)
T ss_dssp HHHHHTTCHHHHHHHH---------HHHHHHHHTSSSCSSCSHHHHHHHHHHHTSCCTTHHHHHHHHHHHHHHHCTTCHH
T ss_pred HHHHHCCCHHHHHHHH---------HHHHHhhhccchHHHHHHHHHHHHHHHhhhhhcCCHHHHHHHHHHHHHhCcccHH
Confidence 7777777765443332 222211 11211 1 12222222 34566778888888875555544
Q ss_pred HHHHHhhh
Q psy4703 232 VRALVGLC 239 (401)
Q Consensus 232 ~ralvgLc 239 (401)
.....|.|
T Consensus 451 ~~~~la~~ 458 (514)
T 2gw1_A 451 AKIGLAQM 458 (514)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 43333433
No 95
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=99.44 E-value=6.3e-13 Score=112.48 Aligned_cols=110 Identities=7% Similarity=-0.055 Sum_probs=97.3
Q ss_pred HHHHHHHhhcCCCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHh
Q psy4703 30 DFYTKALKVTAEESHERATCLKNRAAVYLKQNQNDKVIEDCSKSLEIVPDDPKALFRRCQAYEAIGKFEEAYTDAKHIHR 109 (401)
Q Consensus 30 ~~y~~Al~l~~p~~~~~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~ldP~~~kA~~~~a~a~~~lg~~eeA~~~~~kal~ 109 (401)
..|.+++.++ |+ +...++++|.+++..|+|++|+..|++++..+|+++.+|+.+|.+|..+|+|++|+.+|++++.
T Consensus 5 ~~l~~al~~~-p~---~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~ 80 (142)
T 2xcb_A 5 GTLAMLRGLS-ED---TLEQLYALGFNQYQAGKWDDAQKIFQALCMLDHYDARYFLGLGACRQSLGLYEQALQSYSYGAL 80 (142)
T ss_dssp ----CCTTCC-HH---HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred hhHHHHHcCC-HH---HHHHHHHHHHHHHHHccHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHHhhHHHHHHHHHHHHh
Confidence 4577788888 55 8899999999999999999999999999999999999999999999999999999999999999
Q ss_pred hCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q psy4703 110 VEPTNKAIQPVLSRLFAIVTKRMQENEQLQNKVHNMFKYVFD 151 (401)
Q Consensus 110 l~P~~~~~~~~L~~l~~~~~~~~~a~~~~~~~~~~~~~~~~~ 151 (401)
++|+++.++..++.++..+++..++.. +|+.++.
T Consensus 81 ~~p~~~~~~~~lg~~~~~~g~~~~A~~--------~~~~al~ 114 (142)
T 2xcb_A 81 MDINEPRFPFHAAECHLQLGDLDGAES--------GFYSARA 114 (142)
T ss_dssp HCTTCTHHHHHHHHHHHHTTCHHHHHH--------HHHHHHH
T ss_pred cCCCCcHHHHHHHHHHHHcCCHHHHHH--------HHHHHHH
Confidence 999999999999999999998866555 5555555
No 96
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=99.44 E-value=1e-12 Score=133.06 Aligned_cols=128 Identities=13% Similarity=0.120 Sum_probs=77.1
Q ss_pred CChhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcCCCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHH
Q psy4703 4 NNMNDYNKLKESGNSAFKQGDYETALDFYTKALKVTAEESHERATCLKNRAAVYLKQNQNDKVIEDCSKSLEIVPDDPKA 83 (401)
Q Consensus 4 ~~p~~a~~l~~~Gn~~~~~g~y~eAi~~y~~Al~l~~p~~~~~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~ldP~~~kA 83 (401)
.+|. ...+...|..++..|+|++|+.+|.++++.+ |+ ...++.++|.+|...|+|++|+..|+++++++|+++.+
T Consensus 272 ~~~~-~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~-~~---~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~ 346 (537)
T 3fp2_A 272 LHPT-PNSYIFLALTLADKENSQEFFKFFQKAVDLN-PE---YPPTYYHRGQMYFILQDYKNAKEDFQKAQSLNPENVYP 346 (537)
T ss_dssp HCCC-HHHHHHHHHHTCCSSCCHHHHHHHHHHHHHC-TT---CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCSHH
T ss_pred cCCC-chHHHHHHHHHHHhcCHHHHHHHHHHHhccC-CC---CHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHH
Confidence 3444 5555666666666666666666666666666 44 55556666666666666666666666666666666666
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCccHHHHHHHHHHHHHHHHHHHH
Q psy4703 84 LFRRCQAYEAIGKFEEAYTDAKHIHRVEPTNKAIQPVLSRLFAIVTKRMQENE 136 (401)
Q Consensus 84 ~~~~a~a~~~lg~~eeA~~~~~kal~l~P~~~~~~~~L~~l~~~~~~~~~a~~ 136 (401)
++.+|.++..+|++++|+..|+++++++|++..++..++.++...++..++..
T Consensus 347 ~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~ 399 (537)
T 3fp2_A 347 YIQLACLLYKQGKFTESEAFFNETKLKFPTLPEVPTFFAEILTDRGDFDTAIK 399 (537)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCCHHHHHH
Confidence 66666666666666666666666666666666666666555555555444443
No 97
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=99.44 E-value=2.6e-12 Score=118.25 Aligned_cols=124 Identities=18% Similarity=0.168 Sum_probs=111.1
Q ss_pred HHHcCCHHHHHHHHHHHHhhcCC-CCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCH
Q psy4703 19 AFKQGDYETALDFYTKALKVTAE-ESHERATCLKNRAAVYLKQNQNDKVIEDCSKSLEIVPDDPKALFRRCQAYEAIGKF 97 (401)
Q Consensus 19 ~~~~g~y~eAi~~y~~Al~l~~p-~~~~~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~ldP~~~kA~~~~a~a~~~lg~~ 97 (401)
+...|+|++|+..|+++++.. | .++..+.+++++|.+|...|++++|+..|+++++++|+++.+++.+|.++..+|++
T Consensus 15 ~~~~~~~~~A~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~~ 93 (275)
T 1xnf_A 15 LQPTLQQEVILARMEQILASR-ALTDDERAQLLYERGVLYDSLGLRALARNDFSQALAIRPDMPEVFNYLGIYLTQAGNF 93 (275)
T ss_dssp CCCCHHHHHHHHHHHHHHTSS-CCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCH
T ss_pred cCccchHHHHHHHHHHHHhcc-cccCchhHHHHHHHHHHHHHcccHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHccCH
Confidence 445689999999999999985 3 22458999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q psy4703 98 EEAYTDAKHIHRVEPTNKAIQPVLSRLFAIVTKRMQENEQLQNKVHNMFKYVFD 151 (401)
Q Consensus 98 eeA~~~~~kal~l~P~~~~~~~~L~~l~~~~~~~~~a~~~~~~~~~~~~~~~~~ 151 (401)
++|+..|+++++++|++..++..++.++...++..++.. +|+.+..
T Consensus 94 ~~A~~~~~~al~~~~~~~~~~~~la~~~~~~g~~~~A~~--------~~~~a~~ 139 (275)
T 1xnf_A 94 DAAYEAFDSVLELDPTYNYAHLNRGIALYYGGRDKLAQD--------DLLAFYQ 139 (275)
T ss_dssp HHHHHHHHHHHHHCTTCTHHHHHHHHHHHHTTCHHHHHH--------HHHHHHH
T ss_pred HHHHHHHHHHHhcCccccHHHHHHHHHHHHhccHHHHHH--------HHHHHHH
Confidence 999999999999999999999999999988888755444 6677766
No 98
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=99.43 E-value=1.4e-12 Score=122.87 Aligned_cols=130 Identities=12% Similarity=0.205 Sum_probs=116.6
Q ss_pred cCChhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcCCCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH
Q psy4703 3 DNNMNDYNKLKESGNSAFKQGDYETALDFYTKALKVTAEESHERATCLKNRAAVYLKQNQNDKVIEDCSKSLEIVPDDPK 82 (401)
Q Consensus 3 ~~~p~~a~~l~~~Gn~~~~~g~y~eAi~~y~~Al~l~~p~~~~~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~ldP~~~k 82 (401)
+.+|.++..+...|..+...|++++|+.+|.++++.+ |+ ...++.++|.+|...|++++|+..++++++.+|+++.
T Consensus 166 ~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~-~~---~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~ 241 (327)
T 3cv0_A 166 EMNPNDAQLHASLGVLYNLSNNYDSAAANLRRAVELR-PD---DAQLWNKLGATLANGNRPQEALDAYNRALDINPGYVR 241 (327)
T ss_dssp HHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TT---CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH
T ss_pred hhCCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhC-CC---cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHH
Confidence 4567788899999999999999999999999999999 76 7889999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC------------CccHHHHHHHHHHHHHHHHHHHH
Q psy4703 83 ALFRRCQAYEAIGKFEEAYTDAKHIHRVEPT------------NKAIQPVLSRLFAIVTKRMQENE 136 (401)
Q Consensus 83 A~~~~a~a~~~lg~~eeA~~~~~kal~l~P~------------~~~~~~~L~~l~~~~~~~~~a~~ 136 (401)
+++.+|.++..+|++++|+..|+++++++|+ +..++..++.++..+++...+..
T Consensus 242 ~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~ 307 (327)
T 3cv0_A 242 VMYNMAVSYSNMSQYDLAAKQLVRAIYMQVGGTTPTGEASREATRSMWDFFRMLLNVMNRPDLVEL 307 (327)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSCC-----CCTHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHHhCCccccccccchhhcCHHHHHHHHHHHHhcCCHHHHHH
Confidence 9999999999999999999999999999998 67788888888887777655444
No 99
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=99.42 E-value=1.1e-11 Score=127.64 Aligned_cols=159 Identities=14% Similarity=0.048 Sum_probs=106.2
Q ss_pred hhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcCCCC-------------------------------cchHHHHHHHH
Q psy4703 6 MNDYNKLKESGNSAFKQGDYETALDFYTKALKVTAEES-------------------------------HERATCLKNRA 54 (401)
Q Consensus 6 p~~a~~l~~~Gn~~~~~g~y~eAi~~y~~Al~l~~p~~-------------------------------~~~~~~~~n~a 54 (401)
|.+...+...|..+++.|++++|+..|+++++.+ |+. |.+..++..+|
T Consensus 302 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~-~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~ 380 (597)
T 2xpi_A 302 EKSSDLLLCKADTLFVRSRFIDVLAITTKILEID-PYNLDVYPLHLASLHESGEKNKLYLISNDLVDRHPEKAVTWLAVG 380 (597)
T ss_dssp GGCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCCTTHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSHHHHHHHH
T ss_pred CchHHHHHHHHHHHHHhcCHHHHHHHHHHHHHcC-cccHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhCcccHHHHHHHH
Confidence 5678888888888999999999999988888877 541 22455666677
Q ss_pred HHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCccHHHHHHHHHHHHHHHHHH
Q psy4703 55 AVYLKQNQNDKVIEDCSKSLEIVPDDPKALFRRCQAYEAIGKFEEAYTDAKHIHRVEPTNKAIQPVLSRLFAIVTKRMQE 134 (401)
Q Consensus 55 ~~y~klg~y~~Ai~~~~kAL~ldP~~~kA~~~~a~a~~~lg~~eeA~~~~~kal~l~P~~~~~~~~L~~l~~~~~~~~~a 134 (401)
.+|.+.|++++|+..|+++++++|.++.+|+.+|.+|...|++++|+..|+++++++|++..++..++.++...++..++
T Consensus 381 ~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A 460 (597)
T 2xpi_A 381 IYYLCVNKISEARRYFSKSSTMDPQFGPAWIGFAHSFAIEGEHDQAISAYTTAARLFQGTHLPYLFLGMQHMQLGNILLA 460 (597)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTTTCSHHHHHHHHHHHHHTCHHHH
T ss_pred HHHHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHHHcCCHHHH
Confidence 77777777777777777777777777777777777777777777777777777777776666666666666666555433
Q ss_pred HHHHHHHHHHHHHHhhc-CCCChhHHHHHHHHHHHhhhcc
Q psy4703 135 NEQLQNKVHNMFKYVFD-TSAPMDKRVTAVNNLVVLAREM 173 (401)
Q Consensus 135 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~a~~~L~~l~~~~ 173 (401)
.. +|+.+.. .+.+..........+...++.+
T Consensus 461 ~~--------~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~ 492 (597)
T 2xpi_A 461 NE--------YLQSSYALFQYDPLLLNELGVVAFNKSDMQ 492 (597)
T ss_dssp HH--------HHHHHHHHCCCCHHHHHHHHHHHHHTTCHH
T ss_pred HH--------HHHHHHHhCCCChHHHHHHHHHHHHhCCHH
Confidence 33 4555554 3444444444444555555543
No 100
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=99.42 E-value=2.8e-12 Score=114.37 Aligned_cols=104 Identities=13% Similarity=0.155 Sum_probs=98.9
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcCCCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH------
Q psy4703 8 DYNKLKESGNSAFKQGDYETALDFYTKALKVTAEESHERATCLKNRAAVYLKQNQNDKVIEDCSKSLEIVPDDP------ 81 (401)
Q Consensus 8 ~a~~l~~~Gn~~~~~g~y~eAi~~y~~Al~l~~p~~~~~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~ldP~~~------ 81 (401)
++..+...|..++..|+|++|+.+|.+++.++ |+ ...+++++|.+|+.+|+|++|+.+|++++++.|.+.
T Consensus 36 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~-~~---~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~ 111 (213)
T 1hh8_A 36 HSRICFNIGCMYTILKNMTEAEKAFTRSINRD-KH---LAVAYFQRGMLYYQTEKYDLAIKDLKEALIQLRGNQLIDYKI 111 (213)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TT---CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCSEEECGG
T ss_pred ChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-cc---chHHHHHHHHHHHHcccHHHHHHHHHHHHHhCCCccHHHHHH
Confidence 56789999999999999999999999999999 76 889999999999999999999999999999888776
Q ss_pred ----------HHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCc
Q psy4703 82 ----------KALFRRCQAYEAIGKFEEAYTDAKHIHRVEPTNK 115 (401)
Q Consensus 82 ----------kA~~~~a~a~~~lg~~eeA~~~~~kal~l~P~~~ 115 (401)
.+++++|.+|..+|++++|+..|+++++++|++.
T Consensus 112 ~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~ 155 (213)
T 1hh8_A 112 LGLQFKLFACEVLYNIAFMYAKKEEWKKAEEQLALATSMKSEPR 155 (213)
T ss_dssp GTBCCEEEHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSGG
T ss_pred hccccCccchHHHHHHHHHHHHccCHHHHHHHHHHHHHcCcccc
Confidence 9999999999999999999999999999999874
No 101
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=99.42 E-value=1.6e-12 Score=130.58 Aligned_cols=158 Identities=12% Similarity=0.089 Sum_probs=105.0
Q ss_pred cCChhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcCCCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH
Q psy4703 3 DNNMNDYNKLKESGNSAFKQGDYETALDFYTKALKVTAEESHERATCLKNRAAVYLKQNQNDKVIEDCSKSLEIVPDDPK 82 (401)
Q Consensus 3 ~~~p~~a~~l~~~Gn~~~~~g~y~eAi~~y~~Al~l~~p~~~~~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~ldP~~~k 82 (401)
..+|.+...+...|..++..|++++|+..|.++++++ |+ +..++.++|.+|...|++++|+..++++++.+|+++.
T Consensus 298 ~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~-~~---~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~ 373 (514)
T 2gw1_A 298 KLDSNNSSVYYHRGQMNFILQNYDQAGKDFDKAKELD-PE---NIFPYIQLACLAYRENKFDDCETLFSEAKRKFPEAPE 373 (514)
T ss_dssp TTCTTCTHHHHHHHHHHHHTTCTTHHHHHHHHHHHTC-SS---CSHHHHHHHHHTTTTTCHHHHHHHHHHHHHHSTTCSH
T ss_pred hcCcCCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhC-hh---hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHcccCHH
Confidence 4456666677777777777777777777777777777 54 5566777777777777777777777777777777777
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCcc------HHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHhhc-C
Q psy4703 83 ALFRRCQAYEAIGKFEEAYTDAKHIHRVEPTNKA------IQPVLSRLFAI---VTKRMQENEQLQNKVHNMFKYVFD-T 152 (401)
Q Consensus 83 A~~~~a~a~~~lg~~eeA~~~~~kal~l~P~~~~------~~~~L~~l~~~---~~~~~~a~~~~~~~~~~~~~~~~~-~ 152 (401)
+++.+|.++..+|++++|+..|+++++++|+++. ++..++.++.. .++..++.. +|+.+.. .
T Consensus 374 ~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~A~~--------~~~~a~~~~ 445 (514)
T 2gw1_A 374 VPNFFAEILTDKNDFDKALKQYDLAIELENKLDGIYVGIAPLVGKATLLTRNPTVENFIEATN--------LLEKASKLD 445 (514)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTSSSCSSCSHHHHHHHHHHHTSCCTTHHHHHHH--------HHHHHHHHC
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhhhhhcCCHHHHHH--------HHHHHHHhC
Confidence 7777777777777777777777777777776655 66666666666 555543333 4555554 3
Q ss_pred CCChhHHHHHHHHHHHhhhc
Q psy4703 153 SAPMDKRVTAVNNLVVLARE 172 (401)
Q Consensus 153 ~~~~~~~~~a~~~L~~l~~~ 172 (401)
|.........+..+...++.
T Consensus 446 ~~~~~~~~~la~~~~~~g~~ 465 (514)
T 2gw1_A 446 PRSEQAKIGLAQMKLQQEDI 465 (514)
T ss_dssp TTCHHHHHHHHHHHHHTTCH
T ss_pred cccHHHHHHHHHHHHHhcCH
Confidence 44444445555555555554
No 102
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.41 E-value=9.4e-13 Score=125.26 Aligned_cols=133 Identities=11% Similarity=-0.014 Sum_probs=121.6
Q ss_pred ccCChhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcCCCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH
Q psy4703 2 IDNNMNDYNKLKESGNSAFKQGDYETALDFYTKALKVTAEESHERATCLKNRAAVYLKQNQNDKVIEDCSKSLEIVPDDP 81 (401)
Q Consensus 2 i~~~p~~a~~l~~~Gn~~~~~g~y~eAi~~y~~Al~l~~p~~~~~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~ldP~~~ 81 (401)
++.+|+++.++...|..+...|++++|+..|++++..+ |+ ....+.+.+..+...+++++|+..+.++++.+|+++
T Consensus 144 l~~~P~~~~a~~~la~~~~~~g~~~~A~~~l~~~~~~~-p~---~~~~~~~~~~~l~~~~~~~~a~~~l~~al~~~P~~~ 219 (287)
T 3qou_A 144 WQLSNQNGEIGLLLAETLIALNRSEDAEAVLXTIPLQD-QD---TRYQGLVAQIELLXQAADTPEIQQLQQQVAENPEDA 219 (287)
T ss_dssp HHHTTSCHHHHHHHHHHHHHTTCHHHHHHHHTTSCGGG-CS---HHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHCTTCH
T ss_pred HHhCCcchhHHHHHHHHHHHCCCHHHHHHHHHhCchhh-cc---hHHHHHHHHHHHHhhcccCccHHHHHHHHhcCCccH
Confidence 46789999999999999999999999999999999999 75 667788888889999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC--ccHHHHHHHHHHHHHHHHHHHHHH
Q psy4703 82 KALFRRCQAYEAIGKFEEAYTDAKHIHRVEPTN--KAIQPVLSRLFAIVTKRMQENEQL 138 (401)
Q Consensus 82 kA~~~~a~a~~~lg~~eeA~~~~~kal~l~P~~--~~~~~~L~~l~~~~~~~~~a~~~~ 138 (401)
.+++.+|.+|...|++++|+..|+++++.+|++ ..++..++.++..+++...+...+
T Consensus 220 ~~~~~la~~l~~~g~~~~A~~~l~~~l~~~p~~~~~~a~~~l~~~~~~~g~~~~a~~~~ 278 (287)
T 3qou_A 220 ALATQLALQLHQVGRNEEALELLFGHLRXDLTAADGQTRXTFQEILAALGTGDALASXY 278 (287)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTGGGGHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred HHHHHHHHHHHHcccHHHHHHHHHHHHhcccccccchHHHHHHHHHHHcCCCCcHHHHH
Confidence 999999999999999999999999999999998 888999999998888765555433
No 103
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=99.41 E-value=1.5e-13 Score=109.53 Aligned_cols=96 Identities=25% Similarity=0.415 Sum_probs=89.7
Q ss_pred hHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcCCCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC------
Q psy4703 7 NDYNKLKESGNSAFKQGDYETALDFYTKALKVTAEESHERATCLKNRAAVYLKQNQNDKVIEDCSKSLEIVPDD------ 80 (401)
Q Consensus 7 ~~a~~l~~~Gn~~~~~g~y~eAi~~y~~Al~l~~p~~~~~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~ldP~~------ 80 (401)
.++..+...|..++..|+|++|+..|+++++++ |+ ++.+++++|.+|+.+|+|++|+.+|+++++++|++
T Consensus 2 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~-p~---~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~ 77 (111)
T 2l6j_A 2 SQFEKQKEQGNSLFKQGLYREAVHCYDQLITAQ-PQ---NPVGYSNKAMALIKLGEYTQAIQMCQQGLRYTSTAEHVAIR 77 (111)
T ss_dssp THHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHC-TT---CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCSSTTSHHHH
T ss_pred chHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcC-CC---CHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCccHHHHH
Confidence 367889999999999999999999999999999 76 78999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHH
Q psy4703 81 PKALFRRCQAYEAIGKFEEAYTDAKH 106 (401)
Q Consensus 81 ~kA~~~~a~a~~~lg~~eeA~~~~~k 106 (401)
..+++++|.++..+|++++|+..+++
T Consensus 78 ~~~~~~~~~~~~~~~~~~~a~~~~~~ 103 (111)
T 2l6j_A 78 SKLQYRLELAQGAVGSVQIPVVEVDE 103 (111)
T ss_dssp HHHHHHHHHHHHHHHCCCCCSSSSSS
T ss_pred HHHHHHHHHHHHHHHhHhhhHhHHHH
Confidence 99999999999999999988877654
No 104
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=99.40 E-value=1.2e-12 Score=114.61 Aligned_cols=131 Identities=11% Similarity=0.107 Sum_probs=110.5
Q ss_pred CccCChhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcCCCCcchHHHHHHHHHHH-HHcCCHHHHHHHHHHHHHhCCC
Q psy4703 1 MIDNNMNDYNKLKESGNSAFKQGDYETALDFYTKALKVTAEESHERATCLKNRAAVY-LKQNQNDKVIEDCSKSLEIVPD 79 (401)
Q Consensus 1 ~i~~~p~~a~~l~~~Gn~~~~~g~y~eAi~~y~~Al~l~~p~~~~~~~~~~n~a~~y-~klg~y~~Ai~~~~kAL~ldP~ 79 (401)
+++.+|+++..+...|..+...|++++|+..|++++... | . +..+..++.+. ...++..+|+..++++++++|+
T Consensus 32 al~~~P~~~~a~~~la~~~~~~g~~~~A~~~~~~a~~~~-p-~---~~~~~~~~~~~~~~~~~~~~a~~~~~~al~~~P~ 106 (176)
T 2r5s_A 32 LSDELQSRGDVKLAKADCLLETKQFELAQELLATIPLEY-Q-D---NSYKSLIAKLELHQQAAESPELKRLEQELAANPD 106 (176)
T ss_dssp SCHHHHTSHHHHHHHHHHHHHTTCHHHHHHHHTTCCGGG-C-C---HHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHSTT
T ss_pred HHHHCCCcHHHHHHHHHHHHHCCCHHHHHHHHHHhhhcc-C-C---hHHHHHHHHHHHHhhcccchHHHHHHHHHHhCCC
Confidence 356789999999999999999999999999999999999 6 2 33444444443 2334455689999999999999
Q ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC--ccHHHHHHHHHHHHHHHHHHHH
Q psy4703 80 DPKALFRRCQAYEAIGKFEEAYTDAKHIHRVEPTN--KAIQPVLSRLFAIVTKRMQENE 136 (401)
Q Consensus 80 ~~kA~~~~a~a~~~lg~~eeA~~~~~kal~l~P~~--~~~~~~L~~l~~~~~~~~~a~~ 136 (401)
++.+++.+|.++..+|++++|+..|+++++++|+. ..++..++.++...++...+..
T Consensus 107 ~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~a~~~l~~~~~~~g~~~~A~~ 165 (176)
T 2r5s_A 107 NFELACELAVQYNQVGRDEEALELLWNILKVNLGAQDGEVKKTFMDILSALGQGNAIAS 165 (176)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTTTTTHHHHHHHHHHHHHCSSCHHHH
T ss_pred CHHHHHHHHHHHHHcccHHHHHHHHHHHHHhCcccChHHHHHHHHHHHHHhCCCCcHHH
Confidence 99999999999999999999999999999999976 5589999999888887765554
No 105
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=99.40 E-value=5.2e-12 Score=103.81 Aligned_cols=92 Identities=14% Similarity=0.166 Sum_probs=87.1
Q ss_pred chHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCccHHHHHHHH
Q psy4703 45 ERATCLKNRAAVYLKQNQNDKVIEDCSKSLEIVPDDPKALFRRCQAYEAIGKFEEAYTDAKHIHRVEPTNKAIQPVLSRL 124 (401)
Q Consensus 45 ~~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~ldP~~~kA~~~~a~a~~~lg~~eeA~~~~~kal~l~P~~~~~~~~L~~l 124 (401)
..+..+.++|.++++.|+|++|+..|+++++++|+++.+++++|.+|..+|+|++|+.+|+++++++|++..++..++.+
T Consensus 2 ~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~ 81 (126)
T 3upv_A 2 MKAEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPEDARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRAYIRKATA 81 (126)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHHHHHHHHHH
Confidence 36789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHH
Q psy4703 125 FAIVTKRMQENE 136 (401)
Q Consensus 125 ~~~~~~~~~a~~ 136 (401)
+..+++..++..
T Consensus 82 ~~~~~~~~~A~~ 93 (126)
T 3upv_A 82 QIAVKEYASALE 93 (126)
T ss_dssp HHHTTCHHHHHH
T ss_pred HHHHhCHHHHHH
Confidence 999988766555
No 106
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=99.40 E-value=3.4e-12 Score=103.41 Aligned_cols=108 Identities=29% Similarity=0.474 Sum_probs=101.7
Q ss_pred cCChhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcCCCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH
Q psy4703 3 DNNMNDYNKLKESGNSAFKQGDYETALDFYTKALKVTAEESHERATCLKNRAAVYLKQNQNDKVIEDCSKSLEIVPDDPK 82 (401)
Q Consensus 3 ~~~p~~a~~l~~~Gn~~~~~g~y~eAi~~y~~Al~l~~p~~~~~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~ldP~~~k 82 (401)
+.+|.+...+...|..++..|++++|+.+|.+++... |. ...++.++|.++...|++++|+..+++++..+|.+..
T Consensus 29 ~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~-~~---~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~ 104 (136)
T 2fo7_A 29 ELDPRSAEAWYNLGNAYYKQGDYDEAIEYYQKALELD-PR---SAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAE 104 (136)
T ss_dssp HHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC-TT---CHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHH
T ss_pred HcCCcchhHHHHHHHHHHHhcCHHHHHHHHHHHHHHC-CC---chHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCChH
Confidence 4467788889999999999999999999999999999 76 6789999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC
Q psy4703 83 ALFRRCQAYEAIGKFEEAYTDAKHIHRVEPTN 114 (401)
Q Consensus 83 A~~~~a~a~~~lg~~eeA~~~~~kal~l~P~~ 114 (401)
+++.+|.++...|++++|+..|+++++++|++
T Consensus 105 ~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~ 136 (136)
T 2fo7_A 105 AWYNLGNAYYKQGDYDEAIEYYQKALELDPRS 136 (136)
T ss_dssp HHHHHHHHHHTTTCHHHHHHHHHHHHHHSTTC
T ss_pred HHHHHHHHHHHHccHHHHHHHHHHHHccCCCC
Confidence 99999999999999999999999999999864
No 107
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=99.40 E-value=3.1e-12 Score=117.42 Aligned_cols=135 Identities=20% Similarity=0.207 Sum_probs=119.5
Q ss_pred CChhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcC----CCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh---
Q psy4703 4 NNMNDYNKLKESGNSAFKQGDYETALDFYTKALKVTA----EESHERATCLKNRAAVYLKQNQNDKVIEDCSKSLEI--- 76 (401)
Q Consensus 4 ~~p~~a~~l~~~Gn~~~~~g~y~eAi~~y~~Al~l~~----p~~~~~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~l--- 76 (401)
.+|..+..+...|..++..|+|++|+.+|.+++++.. ++++....++.++|.+|..+|++++|+..|.+++.+
T Consensus 38 ~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~ 117 (283)
T 3edt_B 38 DHPDVATMLNILALVYRDQNKYKEAAHLLNDALAIREKTLGKDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREK 117 (283)
T ss_dssp SSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHH
Confidence 3478899999999999999999999999999998831 223568899999999999999999999999999998
Q ss_pred -----CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh--------CCCCccHHHHHHHHHHHHHHHHHHHHHH
Q psy4703 77 -----VPDDPKALFRRCQAYEAIGKFEEAYTDAKHIHRV--------EPTNKAIQPVLSRLFAIVTKRMQENEQL 138 (401)
Q Consensus 77 -----dP~~~kA~~~~a~a~~~lg~~eeA~~~~~kal~l--------~P~~~~~~~~L~~l~~~~~~~~~a~~~~ 138 (401)
+|....+++.+|.+|..+|++++|+..|++++++ +|....+...++.++...++..++...+
T Consensus 118 ~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~ 192 (283)
T 3edt_B 118 VLGKFHPDVAKQLNNLALLCQNQGKAEEVEYYYRRALEIYATRLGPDDPNVAKTKNNLASCYLKQGKYQDAETLY 192 (283)
T ss_dssp HHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHHTCHHHHHHHH
T ss_pred HcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 5777899999999999999999999999999999 6666778889999999888887776644
No 108
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=99.39 E-value=1e-11 Score=118.56 Aligned_cols=99 Identities=9% Similarity=0.142 Sum_probs=53.6
Q ss_pred hHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh--cCCCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHH
Q psy4703 7 NDYNKLKESGNSAFKQGDYETALDFYTKALKV--TAEESHERATCLKNRAAVYLKQNQNDKVIEDCSKSLEIVPDDPKAL 84 (401)
Q Consensus 7 ~~a~~l~~~Gn~~~~~g~y~eAi~~y~~Al~l--~~p~~~~~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~ldP~~~kA~ 84 (401)
....++...+..+...|++++|+..|++.+.. + |+ ++.+++.+|.+|...|++++|+..+++ |.++.++
T Consensus 63 ~~~~a~~~la~~~~~~~~~~~A~~~l~~ll~~~~~-P~---~~~~~~~la~~~~~~g~~~~Al~~l~~-----~~~~~~~ 133 (291)
T 3mkr_A 63 PELQAVRMFAEYLASHSRRDAIVAELDREMSRSVD-VT---NTTFLLMAASIYFYDQNPDAALRTLHQ-----GDSLECM 133 (291)
T ss_dssp HHHHHHHHHHHHHHCSTTHHHHHHHHHHHHHSCCC-CS---CHHHHHHHHHHHHHTTCHHHHHHHHTT-----CCSHHHH
T ss_pred hhHHHHHHHHHHHcCCCcHHHHHHHHHHHHhcccC-CC---CHHHHHHHHHHHHHCCCHHHHHHHHhC-----CCCHHHH
Confidence 34445555555555555555555555555543 2 33 445555555555555555555555554 5555555
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHhhCCCC
Q psy4703 85 FRRCQAYEAIGKFEEAYTDAKHIHRVEPTN 114 (401)
Q Consensus 85 ~~~a~a~~~lg~~eeA~~~~~kal~l~P~~ 114 (401)
+.+|.+|..+|++++|+..|+++++++|++
T Consensus 134 ~~l~~~~~~~g~~~~A~~~l~~~~~~~p~~ 163 (291)
T 3mkr_A 134 AMTVQILLKLDRLDLARKELKKMQDQDEDA 163 (291)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHhhCcCc
Confidence 555555555555555555555555555554
No 109
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=99.39 E-value=3.5e-12 Score=132.24 Aligned_cols=136 Identities=13% Similarity=0.032 Sum_probs=104.1
Q ss_pred cCCHHHHHHHHHHHHhhcCCCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHH
Q psy4703 22 QGDYETALDFYTKALKVTAEESHERATCLKNRAAVYLKQNQNDKVIEDCSKSLEIVPDDPKALFRRCQAYEAIGKFEEAY 101 (401)
Q Consensus 22 ~g~y~eAi~~y~~Al~l~~p~~~~~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~ldP~~~kA~~~~a~a~~~lg~~eeA~ 101 (401)
.|++++|+..|+++++++ |+ +..+++++|.+|...|+|++|+..|+++++++|+++.+++.+|.+|..+|++++|+
T Consensus 2 ~g~~~~A~~~~~~al~~~-p~---~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~ 77 (568)
T 2vsy_A 2 TADGPRELLQLRAAVRHR-PQ---DFVAWLMLADAELGMGDTTAGEMAVQRGLALHPGHPEAVARLGRVRWTQQRHAEAA 77 (568)
T ss_dssp --------------------C---CHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTSTTCHHHHHHHHHHHHHTTCHHHHH
T ss_pred CccHHHHHHHHHHHHHhC-CC---CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCCCHHHHH
Confidence 489999999999999999 76 88999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CCCChhHHHHHHHHHHHh
Q psy4703 102 TDAKHIHRVEPTNKAIQPVLSRLFAIVTKRMQENEQLQNKVHNMFKYVFD-TSAPMDKRVTAVNNLVVL 169 (401)
Q Consensus 102 ~~~~kal~l~P~~~~~~~~L~~l~~~~~~~~~a~~~~~~~~~~~~~~~~~-~~~~~~~~~~a~~~L~~l 169 (401)
..|+++++++|++..++..++.++...++..++.. +|+.++. .|.+.......+..+..+
T Consensus 78 ~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~--------~~~~al~~~p~~~~~~~~l~~~~~~~ 138 (568)
T 2vsy_A 78 VLLQQASDAAPEHPGIALWLGHALEDAGQAEAAAA--------AYTRAHQLLPEEPYITAQLLNWRRRL 138 (568)
T ss_dssp HHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHH--------HHHHHHHHCTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHH--------HHHHHHHhCCCCHHHHHHHHHHHHHh
Confidence 99999999999999999999999998888755544 6777777 566666666666667766
No 110
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=99.38 E-value=8.5e-12 Score=119.11 Aligned_cols=133 Identities=11% Similarity=-0.008 Sum_probs=106.3
Q ss_pred hhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcCCCCcchHHHHHHHHHH----HHHcCCHHHHHHHHHHHHHhCCCCH
Q psy4703 6 MNDYNKLKESGNSAFKQGDYETALDFYTKALKVTAEESHERATCLKNRAAV----YLKQNQNDKVIEDCSKSLEIVPDDP 81 (401)
Q Consensus 6 p~~a~~l~~~Gn~~~~~g~y~eAi~~y~~Al~l~~p~~~~~~~~~~n~a~~----y~klg~y~~Ai~~~~kAL~ldP~~~ 81 (401)
|.+.+.+...|..+.+.|++++|+..|+++++.+ |+ .. ..+++.+ +...|++++|+..|+++++.+|+++
T Consensus 127 ~~~~~~~~~l~~~~~~~g~~~~A~~~l~~~~~~~-p~---~~--~~~l~~a~~~l~~~~~~~~eA~~~~~~~l~~~p~~~ 200 (291)
T 3mkr_A 127 GDSLECMAMTVQILLKLDRLDLARKELKKMQDQD-ED---AT--LTQLATAWVSLAAGGEKLQDAYYIFQEMADKCSPTL 200 (291)
T ss_dssp CCSHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TT---CH--HHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHSCCCH
T ss_pred CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhC-cC---cH--HHHHHHHHHHHHhCchHHHHHHHHHHHHHHhCCCcH
Confidence 5667788888899999999999999999999998 75 32 2233333 2334889999999999999999999
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q psy4703 82 KALFRRCQAYEAIGKFEEAYTDAKHIHRVEPTNKAIQPVLSRLFAIVTKRMQENEQLQNKVHNMFKYVFD 151 (401)
Q Consensus 82 kA~~~~a~a~~~lg~~eeA~~~~~kal~l~P~~~~~~~~L~~l~~~~~~~~~a~~~~~~~~~~~~~~~~~ 151 (401)
.+++.+|.++..+|++++|+..|+++++++|+++.++..++.+....++... .+..+++++..
T Consensus 201 ~~~~~la~~~~~~g~~~eA~~~l~~al~~~p~~~~~l~~l~~~~~~~g~~~e-------aa~~~~~~~~~ 263 (291)
T 3mkr_A 201 LLLNGQAACHMAQGRWEAAEGVLQEALDKDSGHPETLINLVVLSQHLGKPPE-------VTNRYLSQLKD 263 (291)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHH-------HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCCHH-------HHHHHHHHHHH
Confidence 9999999999999999999999999999999999999888888777665432 23456777776
No 111
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=99.38 E-value=6e-13 Score=129.75 Aligned_cols=147 Identities=12% Similarity=0.132 Sum_probs=124.8
Q ss_pred HcCCHHHHHHHHHHHHhhcCCCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC---------------HHHHH
Q psy4703 21 KQGDYETALDFYTKALKVTAEESHERATCLKNRAAVYLKQNQNDKVIEDCSKSLEIVPDD---------------PKALF 85 (401)
Q Consensus 21 ~~g~y~eAi~~y~~Al~l~~p~~~~~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~ldP~~---------------~kA~~ 85 (401)
..+++++|+..|.+++... |+ .+.++.++|.+|++.|+|++|+..|+++++++|.+ ..+++
T Consensus 125 ~L~~~~~A~~~~~~a~~~~-p~---~a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~ 200 (336)
T 1p5q_A 125 HLKSFEKAKESWEMNSEEK-LE---QSTIVKERGTVYFKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHL 200 (336)
T ss_dssp EEEEEECCCCGGGCCHHHH-HH---HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTTCCCCCSHHHHHHHHHHHHHHH
T ss_pred EEeecccccchhcCCHHHH-HH---HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHhhccccCChHHHHHHHHHHHHHHH
Confidence 3456778888888888888 54 89999999999999999999999999999999999 79999
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHhhCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CCCChhHHHHHHH
Q psy4703 86 RRCQAYEAIGKFEEAYTDAKHIHRVEPTNKAIQPVLSRLFAIVTKRMQENEQLQNKVHNMFKYVFD-TSAPMDKRVTAVN 164 (401)
Q Consensus 86 ~~a~a~~~lg~~eeA~~~~~kal~l~P~~~~~~~~L~~l~~~~~~~~~a~~~~~~~~~~~~~~~~~-~~~~~~~~~~a~~ 164 (401)
++|.+|..+|+|++|+.+|+++++++|++..++..++.++..+++..++.. .|+.++. .|.+.........
T Consensus 201 nla~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~--------~~~~al~l~P~~~~a~~~l~~ 272 (336)
T 1p5q_A 201 NLAMCHLKLQAFSAAIESCNKALELDSNNEKGLSRRGEAHLAVNDFELARA--------DFQKVLQLYPNNKAAKTQLAV 272 (336)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHH--------HHHHHHHHCSSCHHHHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHCCCHHHHHH--------HHHHHHHHCCCCHHHHHHHHH
Confidence 999999999999999999999999999999999999999999888755544 6777777 5666666666666
Q ss_pred HHHHhhhcchhhHHH
Q psy4703 165 NLVVLAREMSGAEML 179 (401)
Q Consensus 165 ~L~~l~~~~~gae~~ 179 (401)
.+..+++.+.+...+
T Consensus 273 ~~~~~~~~~~a~~~~ 287 (336)
T 1p5q_A 273 CQQRIRRQLAREKKL 287 (336)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 666777765544433
No 112
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=99.37 E-value=5.9e-12 Score=119.67 Aligned_cols=136 Identities=13% Similarity=0.036 Sum_probs=113.2
Q ss_pred hHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcCCCC---cchHHHHHHHHHHHHHc-CCHHHHHHHHHHHHHhCCCC--
Q psy4703 7 NDYNKLKESGNSAFKQGDYETALDFYTKALKVTAEES---HERATCLKNRAAVYLKQ-NQNDKVIEDCSKSLEIVPDD-- 80 (401)
Q Consensus 7 ~~a~~l~~~Gn~~~~~g~y~eAi~~y~~Al~l~~p~~---~~~~~~~~n~a~~y~kl-g~y~~Ai~~~~kAL~ldP~~-- 80 (401)
..+..+.+.|+.+...|+|++|+.+|++|+++. |.. ...+.++.++|.+|... |++++|+.+|++++++.|.+
T Consensus 75 ~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~-~~~g~~~~~a~~~~~lg~~~~~~lg~~~~A~~~~~~Al~~~~~~~~ 153 (292)
T 1qqe_A 75 EAGNTYVEAYKCFKSGGNSVNAVDSLENAIQIF-THRGQFRRGANFKFELGEILENDLHDYAKAIDCYELAGEWYAQDQS 153 (292)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH-HHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH-HHcCCHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhCCC
Confidence 347889999999999999999999999999998 531 12367899999999995 99999999999999998854
Q ss_pred ----HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCcc-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy4703 81 ----PKALFRRCQAYEAIGKFEEAYTDAKHIHRVEPTNKA-------IQPVLSRLFAIVTKRMQENEQLQNKVHNMFKYV 149 (401)
Q Consensus 81 ----~kA~~~~a~a~~~lg~~eeA~~~~~kal~l~P~~~~-------~~~~L~~l~~~~~~~~~a~~~~~~~~~~~~~~~ 149 (401)
..++.++|.+|..+|+|++|+..|+++++++|++.. ++..++.++..+++...+ ..+|+.+
T Consensus 154 ~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A--------~~~~~~a 225 (292)
T 1qqe_A 154 VALSNKCFIKCADLKALDGQYIEASDIYSKLIKSSMGNRLSQWSLKDYFLKKGLCQLAATDAVAA--------ARTLQEG 225 (292)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTSSCTTTGGGHHHHHHHHHHHHHHTTCHHHH--------HHHHHGG
T ss_pred hHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHcCCHHHH--------HHHHHHH
Confidence 567999999999999999999999999999998764 345667777766666444 4477888
Q ss_pred hc
Q psy4703 150 FD 151 (401)
Q Consensus 150 ~~ 151 (401)
..
T Consensus 226 l~ 227 (292)
T 1qqe_A 226 QS 227 (292)
T ss_dssp GC
T ss_pred Hh
Confidence 77
No 113
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=99.35 E-value=4.7e-11 Score=116.92 Aligned_cols=124 Identities=14% Similarity=0.186 Sum_probs=110.8
Q ss_pred hhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcCCCCc-chHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh------CC
Q psy4703 6 MNDYNKLKESGNSAFKQGDYETALDFYTKALKVTAEESH-ERATCLKNRAAVYLKQNQNDKVIEDCSKSLEI------VP 78 (401)
Q Consensus 6 p~~a~~l~~~Gn~~~~~g~y~eAi~~y~~Al~l~~p~~~-~~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~l------dP 78 (401)
+..+..+...|..++..|+|++|+.+|++++++. |+.+ ....++.++|.+|+.+|+|++|+..|++++++ +|
T Consensus 45 ~~~~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~-~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~ 123 (411)
T 4a1s_A 45 SSMCLELALEGERLCNAGDCRAGVAFFQAAIQAG-TEDLRTLSAIYSQLGNAYFYLGDYNKAMQYHKHDLTLAKSMNDRL 123 (411)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-CSCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred hHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHhc-ccChhHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHccCch
Confidence 5678889999999999999999999999999999 7522 23478999999999999999999999999998 67
Q ss_pred CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh------CCCCccHHHHHHHHHHHHHH
Q psy4703 79 DDPKALFRRCQAYEAIGKFEEAYTDAKHIHRV------EPTNKAIQPVLSRLFAIVTK 130 (401)
Q Consensus 79 ~~~kA~~~~a~a~~~lg~~eeA~~~~~kal~l------~P~~~~~~~~L~~l~~~~~~ 130 (401)
....+++.+|.+|..+|++++|+..|++++++ .|....++..++.++...++
T Consensus 124 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~ 181 (411)
T 4a1s_A 124 GEAKSSGNLGNTLKVMGRFDEAAICCERHLTLARQLGDRLSEGRALYNLGNVYHAKGK 181 (411)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHcCc
Confidence 78899999999999999999999999999998 45556678888888888888
No 114
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=99.35 E-value=1.1e-11 Score=117.87 Aligned_cols=134 Identities=8% Similarity=0.064 Sum_probs=109.9
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcCCC---CcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC-----
Q psy4703 9 YNKLKESGNSAFKQGDYETALDFYTKALKVTAEE---SHERATCLKNRAAVYLKQNQNDKVIEDCSKSLEIVPDD----- 80 (401)
Q Consensus 9 a~~l~~~Gn~~~~~g~y~eAi~~y~~Al~l~~p~---~~~~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~ldP~~----- 80 (401)
+..+...|+.+...|+|++|+.+|.+++++. +. .+..+.+|.++|.+|..+|+|++|+.+|++|+++.|..
T Consensus 37 ~~~~~~a~~~~~~~g~~~~A~~~~~~al~~~-~~~~~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~~~~ 115 (292)
T 1qqe_A 37 ADLCVQAATIYRLRKELNLAGDSFLKAADYQ-KKAGNEDEAGNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHRGQFRR 115 (292)
T ss_dssp HHHHHHHHHHHHHTTCTHHHHHHHHHHHHHH-HHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH-HHhCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHcCCHHH
Confidence 3456667888999999999999999999986 31 12347899999999999999999999999999998743
Q ss_pred -HHHHHHHHHHHHHc-CCHHHHHHHHHHHHhhCCCC------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q psy4703 81 -PKALFRRCQAYEAI-GKFEEAYTDAKHIHRVEPTN------KAIQPVLSRLFAIVTKRMQENEQLQNKVHNMFKYVFD 151 (401)
Q Consensus 81 -~kA~~~~a~a~~~l-g~~eeA~~~~~kal~l~P~~------~~~~~~L~~l~~~~~~~~~a~~~~~~~~~~~~~~~~~ 151 (401)
..++.++|.+|... |++++|+.+|++++++.|.+ ..++..++.++...++..++ ..+|+.+..
T Consensus 116 ~a~~~~~lg~~~~~~lg~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A--------~~~~~~al~ 186 (292)
T 1qqe_A 116 GANFKFELGEILENDLHDYAKAIDCYELAGEWYAQDQSVALSNKCFIKCADLKALDGQYIEA--------SDIYSKLIK 186 (292)
T ss_dssp HHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHH--------HHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHhCCHHHH--------HHHHHHHHH
Confidence 56899999999995 99999999999999998865 23456677777777766444 447777777
No 115
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=99.34 E-value=1.3e-11 Score=117.99 Aligned_cols=159 Identities=11% Similarity=0.065 Sum_probs=124.9
Q ss_pred ccCChhHHHHHHHHHHHHHH-------cCCH-------HHHHHHHHHHHh-hcCCCCcchHHHHHHHHHHHHHcCCHHHH
Q psy4703 2 IDNNMNDYNKLKESGNSAFK-------QGDY-------ETALDFYTKALK-VTAEESHERATCLKNRAAVYLKQNQNDKV 66 (401)
Q Consensus 2 i~~~p~~a~~l~~~Gn~~~~-------~g~y-------~eAi~~y~~Al~-l~~p~~~~~~~~~~n~a~~y~klg~y~~A 66 (401)
|..+|.++..|...|..+.. .|++ ++|+..|++|++ ++ |+ +..+|.++|..+...|++++|
T Consensus 43 l~~~p~~~~~w~~~~~~~~~~~~~l~~~g~~~~~~~~~~~A~~~~~rAl~~~~-p~---~~~~~~~~~~~~~~~~~~~~A 118 (308)
T 2ond_A 43 LLVLGHHPDIWYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLL-KK---NMLLYFAYADYEESRMKYEKV 118 (308)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHTTTT-TT---CHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHcCCCHHHHHHHHHHHHHhchhhhhccchhhcccchHHHHHHHHHHHHHhC-cc---cHHHHHHHHHHHHhcCCHHHH
Confidence 45678999999999998874 5885 999999999999 68 76 888999999999999999999
Q ss_pred HHHHHHHHHhCCCCHH-HHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCccHHHHHHHHHHH-HHHHHHHHHHHHHHHHH
Q psy4703 67 IEDCSKSLEIVPDDPK-ALFRRCQAYEAIGKFEEAYTDAKHIHRVEPTNKAIQPVLSRLFAI-VTKRMQENEQLQNKVHN 144 (401)
Q Consensus 67 i~~~~kAL~ldP~~~k-A~~~~a~a~~~lg~~eeA~~~~~kal~l~P~~~~~~~~L~~l~~~-~~~~~~a~~~~~~~~~~ 144 (401)
...|+++++++|.++. +|..+|.++...|++++|...|+++++.+|.+..++...+.+... .++. ..+..
T Consensus 119 ~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~a~~~~~~~~~~--------~~A~~ 190 (308)
T 2ond_A 119 HSIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDARTRHHVYVTAALMEYYCSKDK--------SVAFK 190 (308)
T ss_dssp HHHHHHHHTSSSSCTHHHHHHHHHHHHHHHCHHHHHHHHHHHHTSTTCCTHHHHHHHHHHHHTSCCH--------HHHHH
T ss_pred HHHHHHHHhccccCccHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCH--------HHHHH
Confidence 9999999999999987 999999999999999999999999999999886665543333211 1222 23445
Q ss_pred HHHHhhc-CCCChhHHHHHHHHHHHhhhc
Q psy4703 145 MFKYVFD-TSAPMDKRVTAVNNLVVLARE 172 (401)
Q Consensus 145 ~~~~~~~-~~~~~~~~~~a~~~L~~l~~~ 172 (401)
+|+.++. .|.+.......+.-+..+++.
T Consensus 191 ~~~~al~~~p~~~~~~~~~~~~~~~~g~~ 219 (308)
T 2ond_A 191 IFELGLKKYGDIPEYVLAYIDYLSHLNED 219 (308)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHTTCCH
T ss_pred HHHHHHHhCCCcHHHHHHHHHHHHHCCCH
Confidence 7777777 455544444444444444443
No 116
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=99.33 E-value=2.1e-11 Score=116.42 Aligned_cols=139 Identities=8% Similarity=-0.055 Sum_probs=121.5
Q ss_pred cc-CChhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcCCCCcchHH-HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Q psy4703 2 ID-NNMNDYNKLKESGNSAFKQGDYETALDFYTKALKVTAEESHERAT-CLKNRAAVYLKQNQNDKVIEDCSKSLEIVPD 79 (401)
Q Consensus 2 i~-~~p~~a~~l~~~Gn~~~~~g~y~eAi~~y~~Al~l~~p~~~~~~~-~~~n~a~~y~klg~y~~Ai~~~~kAL~ldP~ 79 (401)
|+ .+|++...|...|..+...|++++|...|++++++. |. ++. +|.++|.++.+.|++++|+..|+++++.+|.
T Consensus 91 l~~~~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~-p~---~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~ 166 (308)
T 2ond_A 91 ISTLLKKNMLLYFAYADYEESRMKYEKVHSIYNRLLAIE-DI---DPTLVYIQYMKFARRAEGIKSGRMIFKKAREDART 166 (308)
T ss_dssp HTTTTTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSS-SS---CTHHHHHHHHHHHHHHHCHHHHHHHHHHHHTSTTC
T ss_pred HHHhCcccHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcc-cc---CccHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCC
Confidence 44 589999999999999999999999999999999999 76 454 8999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHH-cCCHHHHHHHHHHHHhhCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q psy4703 80 DPKALFRRCQAYEA-IGKFEEAYTDAKHIHRVEPTNKAIQPVLSRLFAIVTKRMQENEQLQNKVHNMFKYVFDT 152 (401)
Q Consensus 80 ~~kA~~~~a~a~~~-lg~~eeA~~~~~kal~l~P~~~~~~~~L~~l~~~~~~~~~a~~~~~~~~~~~~~~~~~~ 152 (401)
+..+|...+..... +|++++|+..|+++++++|+++.++..++.+....++..+ +..+|+++...
T Consensus 167 ~~~~~~~~a~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~g~~~~--------A~~~~~~al~~ 232 (308)
T 2ond_A 167 RHHVYVTAALMEYYCSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYLSHLNEDNN--------TRVLFERVLTS 232 (308)
T ss_dssp CTHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCHHH--------HHHHHHHHHHS
T ss_pred CHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHCCCHHH--------HHHHHHHHHhc
Confidence 98888766665443 7999999999999999999999999999888877766543 44578888773
No 117
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=99.33 E-value=2.2e-11 Score=98.64 Aligned_cols=85 Identities=11% Similarity=0.016 Sum_probs=80.8
Q ss_pred HHHHHHHHHHhhcCCCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHH
Q psy4703 27 TALDFYTKALKVTAEESHERATCLKNRAAVYLKQNQNDKVIEDCSKSLEIVPDDPKALFRRCQAYEAIGKFEEAYTDAKH 106 (401)
Q Consensus 27 eAi~~y~~Al~l~~p~~~~~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~ldP~~~kA~~~~a~a~~~lg~~eeA~~~~~k 106 (401)
+|+..|.++++.+ |+ ++.+++++|.+|+..|+|++|+..|+++++++|.++.+++.+|.+|..+|++++|+..|++
T Consensus 3 ~a~~~~~~al~~~-p~---~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~ 78 (115)
T 2kat_A 3 AITERLEAMLAQG-TD---NMLLRFTLGKTYAEHEQFDAALPHLRAALDFDPTYSVAWKWLGKTLQGQGDRAGARQAWES 78 (115)
T ss_dssp CHHHHHHHHHTTT-CC---CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHhC-CC---cHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 5899999999999 76 8899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhCCCCc
Q psy4703 107 IHRVEPTNK 115 (401)
Q Consensus 107 al~l~P~~~ 115 (401)
+++++|.+.
T Consensus 79 al~~~~~~~ 87 (115)
T 2kat_A 79 GLAAAQSRG 87 (115)
T ss_dssp HHHHHHHHT
T ss_pred HHHhccccc
Confidence 999998543
No 118
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=99.33 E-value=2.1e-11 Score=121.83 Aligned_cols=169 Identities=13% Similarity=0.075 Sum_probs=129.9
Q ss_pred CChhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcC----CCCcchHHHHHHHHHHHHHcC--CHHHHHHHHHHHHHhC
Q psy4703 4 NNMNDYNKLKESGNSAFKQGDYETALDFYTKALKVTA----EESHERATCLKNRAAVYLKQN--QNDKVIEDCSKSLEIV 77 (401)
Q Consensus 4 ~~p~~a~~l~~~Gn~~~~~g~y~eAi~~y~~Al~l~~----p~~~~~~~~~~n~a~~y~klg--~y~~Ai~~~~kAL~ld 77 (401)
.+|..+..+.+.|..++..|+|++|+.+|++++++.+ +.++..+.++.++|.+++..| +|++|+.+|+++++++
T Consensus 89 ~~~~~~~~~~nla~~y~~~g~~~~A~~~~~ka~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~y~~A~~~~~kal~~~ 168 (472)
T 4g1t_A 89 AEIRSLVTWGNYAWVYYHMGRLSDVQIYVDKVKHVCEKFSSPYRIESPELDCEEGWTRLKCGGNQNERAKVCFEKALEKK 168 (472)
T ss_dssp CTTTTHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCSSCCCCHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHS
T ss_pred cchHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHhHhcccccchhhHHHHHHHHHHHHHHccccHHHHHHHHHHHHHhC
Confidence 3677788899999999999999999999999999862 223457889999999888765 6999999999999999
Q ss_pred CCCHHHHHHHHHHHH---HcCCHHHHHHHHHHHHhhCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CC
Q psy4703 78 PDDPKALFRRCQAYE---AIGKFEEAYTDAKHIHRVEPTNKAIQPVLSRLFAIVTKRMQENEQLQNKVHNMFKYVFD-TS 153 (401)
Q Consensus 78 P~~~kA~~~~a~a~~---~lg~~eeA~~~~~kal~l~P~~~~~~~~L~~l~~~~~~~~~a~~~~~~~~~~~~~~~~~-~~ 153 (401)
|+++.++..+|.++. ..+++++|+..|+++++++|++..+...++.....+....... ..+..+|+.+.. .|
T Consensus 169 p~~~~~~~~~~~~~~~l~~~~~~~~al~~~~~al~l~p~~~~~~~~l~~~~~~~~~~~~~~----~~a~~~~~~al~~~~ 244 (472)
T 4g1t_A 169 PKNPEFTSGLAIASYRLDNWPPSQNAIDPLRQAIRLNPDNQYLKVLLALKLHKMREEGEEE----GEGEKLVEEALEKAP 244 (472)
T ss_dssp TTCHHHHHHHHHHHHHHHHSCCCCCTHHHHHHHHHHCSSCHHHHHHHHHHHHHCC----------CHHHHHHHHHHHHCS
T ss_pred CCCHHHHHHHHHHHHHhcCchHHHHHHHHHHHHhhcCCcchHHHHHHHHHHHHHHhhhhHH----HHHHHHHHHHHHhCc
Confidence 999999999999865 4577899999999999999999998888776554433221111 234456777776 55
Q ss_pred CChhHHHHHHHHHHHhhhcchhh
Q psy4703 154 APMDKRVTAVNNLVVLAREMSGA 176 (401)
Q Consensus 154 ~~~~~~~~a~~~L~~l~~~~~ga 176 (401)
.........+..+...++.+.+.
T Consensus 245 ~~~~~~~~lg~~~~~~~~~~~A~ 267 (472)
T 4g1t_A 245 GVTDVLRSAAKFYRRKDEPDKAI 267 (472)
T ss_dssp SCHHHHHHHHHHHHHTTCHHHHH
T ss_pred cHHHHHHHHHHHHHHcCchHHHH
Confidence 55666666666666666654443
No 119
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=99.32 E-value=1.8e-10 Score=107.64 Aligned_cols=123 Identities=17% Similarity=0.218 Sum_probs=107.5
Q ss_pred hHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcCCCCc-chHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh------CCC
Q psy4703 7 NDYNKLKESGNSAFKQGDYETALDFYTKALKVTAEESH-ERATCLKNRAAVYLKQNQNDKVIEDCSKSLEI------VPD 79 (401)
Q Consensus 7 ~~a~~l~~~Gn~~~~~g~y~eAi~~y~~Al~l~~p~~~-~~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~l------dP~ 79 (401)
.....+...|..++..|+|++|+.+|+++++.. |+.+ ....++.++|.+|+..|++++|+..+++++++ .|.
T Consensus 3 ~~~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~-~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~ 81 (338)
T 3ro2_A 3 ASCLELALEGERLCKSGDCRAGVSFFEAAVQVG-TEDLKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTIGDQLG 81 (338)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-CSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHH
T ss_pred hHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhC-cccHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhcccccHH
Confidence 456788899999999999999999999999999 7522 23678999999999999999999999999988 556
Q ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCcc------HHHHHHHHHHHHHH
Q psy4703 80 DPKALFRRCQAYEAIGKFEEAYTDAKHIHRVEPTNKA------IQPVLSRLFAIVTK 130 (401)
Q Consensus 80 ~~kA~~~~a~a~~~lg~~eeA~~~~~kal~l~P~~~~------~~~~L~~l~~~~~~ 130 (401)
.+.+++.+|.++..+|++++|+..+++++++.|.... +...++.++...++
T Consensus 82 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 138 (338)
T 3ro2_A 82 EAKASGNLGNTLKVLGNFDEAIVCCQRHLDISRELNDKVGEARALYNLGNVYHAKGK 138 (338)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHcCc
Confidence 6889999999999999999999999999998775544 67778888887777
No 120
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=99.32 E-value=2.6e-11 Score=104.54 Aligned_cols=100 Identities=22% Similarity=0.268 Sum_probs=92.5
Q ss_pred cchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCccHHHHHHH
Q psy4703 44 HERATCLKNRAAVYLKQNQNDKVIEDCSKSLEIVPDDPKALFRRCQAYEAIGKFEEAYTDAKHIHRVEPTNKAIQPVLSR 123 (401)
Q Consensus 44 ~~~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~ldP~~~kA~~~~a~a~~~lg~~eeA~~~~~kal~l~P~~~~~~~~L~~ 123 (401)
+..+..++++|.+++..|+|++|+..|+++++++|+++.+++++|.+|..+|+|++|+.+|+++++++|++..++..++.
T Consensus 8 ~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~ 87 (164)
T 3sz7_A 8 TPESDKLKSEGNAAMARKEYSKAIDLYTQALSIAPANPIYLSNRAAAYSASGQHEKAAEDAELATVVDPKYSKAWSRLGL 87 (164)
T ss_dssp CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Confidence 45889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q psy4703 124 LFAIVTKRMQENEQLQNKVHNMFKYVFD 151 (401)
Q Consensus 124 l~~~~~~~~~a~~~~~~~~~~~~~~~~~ 151 (401)
++..+++..++.. +|+.++.
T Consensus 88 ~~~~~g~~~~A~~--------~~~~al~ 107 (164)
T 3sz7_A 88 ARFDMADYKGAKE--------AYEKGIE 107 (164)
T ss_dssp HHHHTTCHHHHHH--------HHHHHHH
T ss_pred HHHHccCHHHHHH--------HHHHHHH
Confidence 9999888765544 6666666
No 121
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=99.32 E-value=2.4e-11 Score=117.83 Aligned_cols=131 Identities=14% Similarity=0.183 Sum_probs=105.7
Q ss_pred ChhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcCCC---CcchHHHHHHHHHHHHHcCC-------------------
Q psy4703 5 NMNDYNKLKESGNSAFKQGDYETALDFYTKALKVTAEE---SHERATCLKNRAAVYLKQNQ------------------- 62 (401)
Q Consensus 5 ~p~~a~~l~~~Gn~~~~~g~y~eAi~~y~~Al~l~~p~---~~~~~~~~~n~a~~y~klg~------------------- 62 (401)
.|..+..+...|..++..|++++|+.+|.+++++. |. .+....++.++|.+|...|+
T Consensus 83 ~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~-~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~a~~ 161 (406)
T 3sf4_A 83 QLGEAKASGNLGNTLKVLGNFDEAIVCCQRHLDIS-RELNDKVGEARALYNLGNVYHAKGKSFGCPGPQDVGEFPEEVRD 161 (406)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH-HHHTCHHHHHHHHHHHHHHHHHHHHTCC-------CCCCHHHHH
T ss_pred cHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH-HhcccccchHHHHHHHHHHHHHcCCcccccccchhhhhhhhHHH
Confidence 45667788889999999999999999999999887 42 23346688999999999999
Q ss_pred -HHHHHHHHHHHHHh------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCcc------HHHHHHHHHHHHH
Q psy4703 63 -NDKVIEDCSKSLEI------VPDDPKALFRRCQAYEAIGKFEEAYTDAKHIHRVEPTNKA------IQPVLSRLFAIVT 129 (401)
Q Consensus 63 -y~~Ai~~~~kAL~l------dP~~~kA~~~~a~a~~~lg~~eeA~~~~~kal~l~P~~~~------~~~~L~~l~~~~~ 129 (401)
|++|+..+.+++.+ .|....++..+|.+|..+|++++|+..|++++++.|.... +...++.++...+
T Consensus 162 ~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g 241 (406)
T 3sf4_A 162 ALQAAVDFYEENLSLVTALGDRAAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERRAYSNLGNAYIFLG 241 (406)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTBHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHcC
Confidence 99999999999887 3445678899999999999999999999999988776655 6777777777777
Q ss_pred HHHHHHH
Q psy4703 130 KRMQENE 136 (401)
Q Consensus 130 ~~~~a~~ 136 (401)
+..++..
T Consensus 242 ~~~~A~~ 248 (406)
T 3sf4_A 242 EFETASE 248 (406)
T ss_dssp CHHHHHH
T ss_pred ChHHHHH
Confidence 7655544
No 122
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=99.31 E-value=4e-11 Score=99.11 Aligned_cols=96 Identities=10% Similarity=-0.020 Sum_probs=88.3
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCccHHHHHHHHHHH
Q psy4703 48 TCLKNRAAVYLKQNQNDKVIEDCSKSLEIVPDDPKALFRRCQAYEAIGKFEEAYTDAKHIHRVEPTNKAIQPVLSRLFAI 127 (401)
Q Consensus 48 ~~~~n~a~~y~klg~y~~Ai~~~~kAL~ldP~~~kA~~~~a~a~~~lg~~eeA~~~~~kal~l~P~~~~~~~~L~~l~~~ 127 (401)
..++.+|.++++.|++++|+..|+++++++|+++.+|+.+|.++..+|++++|+..|+++++++|++..++..++.++..
T Consensus 18 ~~~~~~g~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~~la~~~~~ 97 (121)
T 1hxi_A 18 ENPMEEGLSMLKLANLAEAALAFEAVCQKEPEREEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVHAALAVSHTN 97 (121)
T ss_dssp SCHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Confidence 45788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhc
Q psy4703 128 VTKRMQENEQLQNKVHNMFKYVFD 151 (401)
Q Consensus 128 ~~~~~~a~~~~~~~~~~~~~~~~~ 151 (401)
.++..++.. .|+.++.
T Consensus 98 ~g~~~~A~~--------~~~~al~ 113 (121)
T 1hxi_A 98 EHNANAALA--------SLRAWLL 113 (121)
T ss_dssp HHHHHHHHH--------HHHHHHC
T ss_pred cCCHHHHHH--------HHHHHHH
Confidence 988765544 6666665
No 123
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=99.31 E-value=2e-11 Score=119.61 Aligned_cols=161 Identities=11% Similarity=0.063 Sum_probs=119.1
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHhhcC--CCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-------CHHHH
Q psy4703 14 ESGNSAFKQGDYETALDFYTKALKVTA--EESHERATCLKNRAAVYLKQNQNDKVIEDCSKSLEIVPD-------DPKAL 84 (401)
Q Consensus 14 ~~Gn~~~~~g~y~eAi~~y~~Al~l~~--p~~~~~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~ldP~-------~~kA~ 84 (401)
..|..++..|+|++|+.+|.+|+++.. ++.+..+.+++++|.+|..+|++++|+.++.+|+++.+. .+.++
T Consensus 108 ~~g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~ 187 (383)
T 3ulq_A 108 FRGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFSMDYARQAYEIYKEHEAYNIRLLQCH 187 (383)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHTTGGGCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCSTTHHHHHHHH
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCccchHHHHHHH
Confidence 499999999999999999999999841 333457899999999999999999999999999998443 35689
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHhhCCCCc------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCChhH
Q psy4703 85 FRRCQAYEAIGKFEEAYTDAKHIHRVEPTNK------AIQPVLSRLFAIVTKRMQENEQLQNKVHNMFKYVFDTSAPMDK 158 (401)
Q Consensus 85 ~~~a~a~~~lg~~eeA~~~~~kal~l~P~~~------~~~~~L~~l~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~ 158 (401)
..+|.+|..+|+|++|+..|++++++.|... .+...++.++...++..++...+ .++.++++.....+.....
T Consensus 188 ~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~-~~al~~~~~~~~~~~~~~~ 266 (383)
T 3ulq_A 188 SLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYEDAIPYF-KRAIAVFEESNILPSLPQA 266 (383)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHH-HHHHHHHHHTTCGGGHHHH
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHCCCHHHHHHHH-HHHHHHHHhhccchhHHHH
Confidence 9999999999999999999999999977554 36777888888888776665522 2222222222211222333
Q ss_pred HHHHHHHHHHhhhcchh
Q psy4703 159 RVTAVNNLVVLAREMSG 175 (401)
Q Consensus 159 ~~~a~~~L~~l~~~~~g 175 (401)
....+..+..+++.+.+
T Consensus 267 ~~~l~~~~~~~g~~~~A 283 (383)
T 3ulq_A 267 YFLITQIHYKLGKIDKA 283 (383)
T ss_dssp HHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHCCCHHHH
Confidence 44444555555554433
No 124
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=99.30 E-value=1.3e-10 Score=108.09 Aligned_cols=130 Identities=13% Similarity=0.137 Sum_probs=113.0
Q ss_pred ChhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcCCCCcchHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhCCCC
Q psy4703 5 NMNDYNKLKESGNSAFKQGDYETALDFYTKALKVTAEESHERATCLKNRAAVYLK----QNQNDKVIEDCSKSLEIVPDD 80 (401)
Q Consensus 5 ~p~~a~~l~~~Gn~~~~~g~y~eAi~~y~~Al~l~~p~~~~~~~~~~n~a~~y~k----lg~y~~Ai~~~~kAL~ldP~~ 80 (401)
+|.++.++...|..++..|++++|+.+|+++++.. +..+++++|.+|.. .+++++|+.+|+++++.+ +
T Consensus 2 ~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~~------~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~--~ 73 (273)
T 1ouv_A 2 AEQDPKELVGLGAKSYKEKDFTQAKKYFEKACDLK------ENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLN--Y 73 (273)
T ss_dssp ---CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTT------CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT--C
T ss_pred CCCChHHHHHHHHHHHhCCCHHHHHHHHHHHHHCC------CHHHHHHHHHHHHcCCCcCCCHHHHHHHHHHHHHCC--C
Confidence 57889999999999999999999999999999955 67899999999999 999999999999999986 8
Q ss_pred HHHHHHHHHHHHH----cCCHHHHHHHHHHHHhhCCCCccHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHhhcC
Q psy4703 81 PKALFRRCQAYEA----IGKFEEAYTDAKHIHRVEPTNKAIQPVLSRLFAI----VTKRMQENEQLQNKVHNMFKYVFDT 152 (401)
Q Consensus 81 ~kA~~~~a~a~~~----lg~~eeA~~~~~kal~l~P~~~~~~~~L~~l~~~----~~~~~~a~~~~~~~~~~~~~~~~~~ 152 (401)
+.+++.+|.+|.. .+++++|+..|+++++.+ ++.+...++.++.. .++..++ ..+|+++...
T Consensus 74 ~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~--~~~a~~~lg~~~~~~~~~~~~~~~A--------~~~~~~a~~~ 143 (273)
T 1ouv_A 74 SNGCHLLGNLYYSGQGVSQNTNKALQYYSKACDLK--YAEGCASLGGIYHDGKVVTRDFKKA--------VEYFTKACDL 143 (273)
T ss_dssp HHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHCSSSCCCHHHH--------HHHHHHHHHT
T ss_pred HHHHHHHHHHHhCCCCcccCHHHHHHHHHHHHHcC--CccHHHHHHHHHHcCCCcccCHHHH--------HHHHHHHHhc
Confidence 9999999999999 999999999999999874 78889999988877 6665444 3466666663
No 125
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=99.30 E-value=1.2e-10 Score=112.91 Aligned_cols=124 Identities=17% Similarity=0.214 Sum_probs=108.3
Q ss_pred hhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcCCCCcc-hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh------CC
Q psy4703 6 MNDYNKLKESGNSAFKQGDYETALDFYTKALKVTAEESHE-RATCLKNRAAVYLKQNQNDKVIEDCSKSLEI------VP 78 (401)
Q Consensus 6 p~~a~~l~~~Gn~~~~~g~y~eAi~~y~~Al~l~~p~~~~-~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~l------dP 78 (401)
+..+..+...|..++..|+|++|+.+|++++++. |+.+. ...++.++|.+|+..|+|++|+..+++++.+ .|
T Consensus 6 ~~~~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~-~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~ 84 (406)
T 3sf4_A 6 EASCLELALEGERLCKSGDCRAGVSFFEAAVQVG-TEDLKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTIGDQL 84 (406)
T ss_dssp CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-CSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhcC-cccHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhccccH
Confidence 3457788999999999999999999999999999 75322 3678999999999999999999999999988 45
Q ss_pred CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCcc------HHHHHHHHHHHHHH
Q psy4703 79 DDPKALFRRCQAYEAIGKFEEAYTDAKHIHRVEPTNKA------IQPVLSRLFAIVTK 130 (401)
Q Consensus 79 ~~~kA~~~~a~a~~~lg~~eeA~~~~~kal~l~P~~~~------~~~~L~~l~~~~~~ 130 (401)
..+.+++.+|.++..+|++++|+..|++++++.|.... +...++.++...++
T Consensus 85 ~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~ 142 (406)
T 3sf4_A 85 GEAKASGNLGNTLKVLGNFDEAIVCCQRHLDISRELNDKVGEARALYNLGNVYHAKGK 142 (406)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHcCC
Confidence 56889999999999999999999999999999875433 77788888888887
No 126
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=99.30 E-value=7.6e-12 Score=111.38 Aligned_cols=148 Identities=11% Similarity=0.056 Sum_probs=112.3
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHhhcCCCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH------------
Q psy4703 14 ESGNSAFKQGDYETALDFYTKALKVTAEESHERATCLKNRAAVYLKQNQNDKVIEDCSKSLEIVPDDP------------ 81 (401)
Q Consensus 14 ~~Gn~~~~~g~y~eAi~~y~~Al~l~~p~~~~~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~ldP~~~------------ 81 (401)
..+......|+|+.|.+.|....... + ..+..+.++|.+++..|+|++|+..|.+++++.|.++
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~ 84 (198)
T 2fbn_A 9 HHSSGRENLYFQGAKKSIYDYTDEEK-V---QSAFDIKEEGNEFFKKNEINEAIVKYKEALDFFIHTEEWDDQILLDKKK 84 (198)
T ss_dssp -------------CCCSGGGCCHHHH-H---HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCTTCCCHHHHHHHH
T ss_pred chhhhhhhhhhccccCchhhCCHHHH-H---HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhcccccchhhHHHHHH
Confidence 34555566778888888877665555 3 3788999999999999999999999999999999887
Q ss_pred ----HHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CCCCh
Q psy4703 82 ----KALFRRCQAYEAIGKFEEAYTDAKHIHRVEPTNKAIQPVLSRLFAIVTKRMQENEQLQNKVHNMFKYVFD-TSAPM 156 (401)
Q Consensus 82 ----kA~~~~a~a~~~lg~~eeA~~~~~kal~l~P~~~~~~~~L~~l~~~~~~~~~a~~~~~~~~~~~~~~~~~-~~~~~ 156 (401)
.+++++|.+|..+|+|++|+.+|+++++++|++..++..++.++..+++...+.. +|+.++. .|.+.
T Consensus 85 ~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~A~~--------~~~~al~~~p~~~ 156 (198)
T 2fbn_A 85 NIEISCNLNLATCYNKNKDYPKAIDHASKVLKIDKNNVKALYKLGVANMYFGFLEEAKE--------NLYKAASLNPNNL 156 (198)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHTCHHHHHH--------HHHHHHHHSTTCH
T ss_pred HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHcccHHHHHH--------HHHHHHHHCCCcH
Confidence 8999999999999999999999999999999999999999999998888755544 6777777 55555
Q ss_pred hHHHHHHHHHHHhhhcc
Q psy4703 157 DKRVTAVNNLVVLAREM 173 (401)
Q Consensus 157 ~~~~~a~~~L~~l~~~~ 173 (401)
........++..+++..
T Consensus 157 ~~~~~l~~~~~~~~~~~ 173 (198)
T 2fbn_A 157 DIRNSYELCVNKLKEAR 173 (198)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 55555555555555543
No 127
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=99.30 E-value=2.3e-11 Score=111.50 Aligned_cols=107 Identities=23% Similarity=0.216 Sum_probs=97.9
Q ss_pred CChhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcC----CCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh---
Q psy4703 4 NNMNDYNKLKESGNSAFKQGDYETALDFYTKALKVTA----EESHERATCLKNRAAVYLKQNQNDKVIEDCSKSLEI--- 76 (401)
Q Consensus 4 ~~p~~a~~l~~~Gn~~~~~g~y~eAi~~y~~Al~l~~----p~~~~~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~l--- 76 (401)
.+|..+..+...|..+...|+|++|+.+|.+++.+.. |+.+....++.++|.+|..+|++++|+..+++++++
T Consensus 80 ~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 159 (283)
T 3edt_B 80 DHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKFHPDVAKQLNNLALLCQNQGKAEEVEYYYRRALEIYAT 159 (283)
T ss_dssp TCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 3578889999999999999999999999999999831 333568999999999999999999999999999999
Q ss_pred -----CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Q psy4703 77 -----VPDDPKALFRRCQAYEAIGKFEEAYTDAKHIHRV 110 (401)
Q Consensus 77 -----dP~~~kA~~~~a~a~~~lg~~eeA~~~~~kal~l 110 (401)
+|....+++.+|.+|..+|++++|+..|++++++
T Consensus 160 ~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~ 198 (283)
T 3edt_B 160 RLGPDDPNVAKTKNNLASCYLKQGKYQDAETLYKEILTR 198 (283)
T ss_dssp HSCTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred hcCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 7778899999999999999999999999999987
No 128
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=99.29 E-value=2.5e-11 Score=113.33 Aligned_cols=133 Identities=23% Similarity=0.176 Sum_probs=114.3
Q ss_pred CChhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcC----CCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh---
Q psy4703 4 NNMNDYNKLKESGNSAFKQGDYETALDFYTKALKVTA----EESHERATCLKNRAAVYLKQNQNDKVIEDCSKSLEI--- 76 (401)
Q Consensus 4 ~~p~~a~~l~~~Gn~~~~~g~y~eAi~~y~~Al~l~~----p~~~~~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~l--- 76 (401)
.+|..+..+...|..++..|+|++|+.+|++++++.. ++.+....++.++|.+|...|++++|+..+.+++.+
T Consensus 22 ~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 101 (311)
T 3nf1_A 22 EIPARLRTLHNLVIQYASQGRYEVAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRDQNKYKDAANLLNDALAIREK 101 (311)
T ss_dssp TSCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Confidence 4788899999999999999999999999999999721 123558899999999999999999999999999988
Q ss_pred -----CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhC--------CCCccHHHHHHHHHHHHHHHHHHHH
Q psy4703 77 -----VPDDPKALFRRCQAYEAIGKFEEAYTDAKHIHRVE--------PTNKAIQPVLSRLFAIVTKRMQENE 136 (401)
Q Consensus 77 -----dP~~~kA~~~~a~a~~~lg~~eeA~~~~~kal~l~--------P~~~~~~~~L~~l~~~~~~~~~a~~ 136 (401)
+|....+++.+|.+|..+|++++|+..|++++++. |....+...++.++...++..++..
T Consensus 102 ~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~ 174 (311)
T 3nf1_A 102 TLGKDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKDHPDVAKQLNNLALLCQNQGKYEEVEY 174 (311)
T ss_dssp HHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHH
T ss_pred HhCCCChHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHcCCHHHHHH
Confidence 46678899999999999999999999999999884 4445667777888777777765555
No 129
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=99.29 E-value=2.9e-12 Score=130.21 Aligned_cols=140 Identities=12% Similarity=0.117 Sum_probs=115.5
Q ss_pred cCCHHHHHHHHHHHHhhcCCCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC---------------HHHHHH
Q psy4703 22 QGDYETALDFYTKALKVTAEESHERATCLKNRAAVYLKQNQNDKVIEDCSKSLEIVPDD---------------PKALFR 86 (401)
Q Consensus 22 ~g~y~eAi~~y~~Al~l~~p~~~~~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~ldP~~---------------~kA~~~ 86 (401)
.++|++|+..|..+++.. |+ .+..+.++|.+|++.|+|++|+..|++|++++|.+ ..+|++
T Consensus 247 l~~~~~A~~~~~~~~~~~-~~---~a~~~~~~G~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~n 322 (457)
T 1kt0_A 247 LKSFEKAKESWEMDTKEK-LE---QAAIVKEKGTVYFKGGKYMQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLN 322 (457)
T ss_dssp EEEEECCCCGGGSCHHHH-HH---HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHHHHHHHHH
T ss_pred hhhcccCcchhhcCHHHH-HH---HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHHHHHHH
Confidence 345667888888888888 54 89999999999999999999999999999999998 799999
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHhhCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CCCChhHHHHHHHH
Q psy4703 87 RCQAYEAIGKFEEAYTDAKHIHRVEPTNKAIQPVLSRLFAIVTKRMQENEQLQNKVHNMFKYVFD-TSAPMDKRVTAVNN 165 (401)
Q Consensus 87 ~a~a~~~lg~~eeA~~~~~kal~l~P~~~~~~~~L~~l~~~~~~~~~a~~~~~~~~~~~~~~~~~-~~~~~~~~~~a~~~ 165 (401)
+|.+|.++|+|++|+.+|+++++++|++..++..++.++..+++..++.. .|++++. .|.+..........
T Consensus 323 la~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~~g~a~~~~g~~~~A~~--------~~~~al~l~P~~~~a~~~l~~~ 394 (457)
T 1kt0_A 323 LAMCYLKLREYTKAVECCDKALGLDSANEKGLYRRGEAQLLMNEFESAKG--------DFEKVLEVNPQNKAARLQISMC 394 (457)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHH--------HHHHHHTTC----CHHHHHHHH
T ss_pred HHHHHHHhcCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHccCHHHHHH--------HHHHHHHhCCCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999888755444 7888887 44444555555555
Q ss_pred HHHhhhcc
Q psy4703 166 LVVLAREM 173 (401)
Q Consensus 166 L~~l~~~~ 173 (401)
+..+++..
T Consensus 395 ~~~~~~~~ 402 (457)
T 1kt0_A 395 QKKAKEHN 402 (457)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 55555543
No 130
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=99.27 E-value=5.2e-11 Score=111.09 Aligned_cols=135 Identities=21% Similarity=0.227 Sum_probs=118.0
Q ss_pred CChhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcC----CCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC--
Q psy4703 4 NNMNDYNKLKESGNSAFKQGDYETALDFYTKALKVTA----EESHERATCLKNRAAVYLKQNQNDKVIEDCSKSLEIV-- 77 (401)
Q Consensus 4 ~~p~~a~~l~~~Gn~~~~~g~y~eAi~~y~~Al~l~~----p~~~~~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~ld-- 77 (401)
.+|..+..+...|..++..|++++|+.+|.+++.+.. ++.+....++.++|.+|..+|++++|+..+.+++++.
T Consensus 64 ~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~ 143 (311)
T 3nf1_A 64 DHPDVATMLNILALVYRDQNKYKDAANLLNDALAIREKTLGKDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREK 143 (311)
T ss_dssp SSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHH
Confidence 4677889999999999999999999999999998831 1225588999999999999999999999999999884
Q ss_pred ------CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh--------CCCCccHHHHHHHHHHHHHHHHHHHHHH
Q psy4703 78 ------PDDPKALFRRCQAYEAIGKFEEAYTDAKHIHRV--------EPTNKAIQPVLSRLFAIVTKRMQENEQL 138 (401)
Q Consensus 78 ------P~~~kA~~~~a~a~~~lg~~eeA~~~~~kal~l--------~P~~~~~~~~L~~l~~~~~~~~~a~~~~ 138 (401)
|....+++.+|.++..+|++++|+..|++++++ +|....+...++.++...++..++...+
T Consensus 144 ~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~ 218 (311)
T 3nf1_A 144 VLGKDHPDVAKQLNNLALLCQNQGKYEEVEYYYQRALEIYQTKLGPDDPNVAKTKNNLASCYLKQGKFKQAETLY 218 (311)
T ss_dssp HHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTSCTTCHHHHHHHHHHHHHHHHHTCHHHHHHHH
T ss_pred hcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 667788999999999999999999999999998 6666778888999998888887776644
No 131
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=99.27 E-value=6.8e-11 Score=90.56 Aligned_cols=80 Identities=26% Similarity=0.373 Sum_probs=42.3
Q ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCccHHHHHHHHH
Q psy4703 46 RATCLKNRAAVYLKQNQNDKVIEDCSKSLEIVPDDPKALFRRCQAYEAIGKFEEAYTDAKHIHRVEPTNKAIQPVLSRLF 125 (401)
Q Consensus 46 ~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~ldP~~~kA~~~~a~a~~~lg~~eeA~~~~~kal~l~P~~~~~~~~L~~l~ 125 (401)
....++++|.+++..|+|++|+..|+++++++|.++.+++.+|.++..+|++++|+..|+++++++|++..++..++.++
T Consensus 8 ~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~ 87 (91)
T 1na3_A 8 SAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAKQNLGNAK 87 (91)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCHHHHHHHHHHH
Confidence 34445555555555555555555555555555555555555555555555555555555555555555555555544443
No 132
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.27 E-value=6.1e-11 Score=124.02 Aligned_cols=123 Identities=12% Similarity=0.027 Sum_probs=117.8
Q ss_pred ccCChhHHHHHHHHHHHHHHcCC----------HHHHHHHHHHHHhhcCCCCcchHHHHHHHHHHHHHcC--CHHHHHHH
Q psy4703 2 IDNNMNDYNKLKESGNSAFKQGD----------YETALDFYTKALKVTAEESHERATCLKNRAAVYLKQN--QNDKVIED 69 (401)
Q Consensus 2 i~~~p~~a~~l~~~Gn~~~~~g~----------y~eAi~~y~~Al~l~~p~~~~~~~~~~n~a~~y~klg--~y~~Ai~~ 69 (401)
|..+|+...+|..+|..+...|+ +++|+.+|+++++.+ |+ +..+|++|+.++.+++ +|++++.+
T Consensus 56 l~~nP~~~taW~~R~~~l~~l~~~~~~~~~~~~~~~eL~~~~~~l~~~-pK---~y~aW~hR~w~l~~l~~~~~~~el~~ 131 (567)
T 1dce_A 56 LGANPDFATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVN-PK---SYGTWHHRCWLLSRLPEPNWARELEL 131 (567)
T ss_dssp HHHCTTCHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHC-TT---CHHHHHHHHHHHHTCSSCCHHHHHHH
T ss_pred HHHCchhHHHHHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHhC-CC---CHHHHHHHHHHHHHcccccHHHHHHH
Confidence 56799999999999999999998 999999999999999 77 9999999999999999 77999999
Q ss_pred HHHHHHhCCCCHHHHHHHHHHHHHcC-CHHHHHHHHHHHHhhCCCCccHHHHHHHHHHHH
Q psy4703 70 CSKSLEIVPDDPKALFRRCQAYEAIG-KFEEAYTDAKHIHRVEPTNKAIQPVLSRLFAIV 128 (401)
Q Consensus 70 ~~kAL~ldP~~~kA~~~~a~a~~~lg-~~eeA~~~~~kal~l~P~~~~~~~~L~~l~~~~ 128 (401)
|++++++||.+..||..|+.++..+| .++++++++.++++.+|+|..++...+.+...+
T Consensus 132 ~~k~l~~d~~N~~aW~~R~~~l~~l~~~~~~el~~~~~~I~~~p~n~saW~~r~~ll~~l 191 (567)
T 1dce_A 132 CARFLEADERNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNYSSWHYRSCLLPQL 191 (567)
T ss_dssp HHHHHHHCTTCHHHHHHHHHHHHHTCCCHHHHHHHHHTTTTTTCCCHHHHHHHHHHHHHH
T ss_pred HHHHHhhccccccHHHHHHHHHHHcCCChHHHHHHHHHHHHHCCCCccHHHHHHHHHHhh
Confidence 99999999999999999999999999 999999999999999999999999999888775
No 133
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=99.26 E-value=1.3e-10 Score=112.45 Aligned_cols=165 Identities=9% Similarity=-0.045 Sum_probs=132.2
Q ss_pred CccCChhHHHHHHHHHHHHHHcC--CHHHHHHHHHHHHhhcCCCCcchHHHHHHHHHHH----HHc---CCHHHHHHHHH
Q psy4703 1 MIDNNMNDYNKLKESGNSAFKQG--DYETALDFYTKALKVTAEESHERATCLKNRAAVY----LKQ---NQNDKVIEDCS 71 (401)
Q Consensus 1 ~i~~~p~~a~~l~~~Gn~~~~~g--~y~eAi~~y~~Al~l~~p~~~~~~~~~~n~a~~y----~kl---g~y~~Ai~~~~ 71 (401)
+|..+|+...++..+|..+...| ++++++.++.+++..+ |. +..+|..|+.++ ..+ +++++++..|+
T Consensus 59 ~L~~nP~~~taWn~R~~~L~~l~~~~~~eeL~~~~~~L~~n-Pk---~y~aW~~R~~iL~~~~~~l~~~~~~~~EL~~~~ 134 (306)
T 3dra_A 59 GINELASHYTIWIYRFNILKNLPNRNLYDELDWCEEIALDN-EK---NYQIWNYRQLIIGQIMELNNNDFDPYREFDILE 134 (306)
T ss_dssp HHHHCTTCHHHHHHHHHHHHTCTTSCHHHHHHHHHHHHHHC-TT---CCHHHHHHHHHHHHHHHHTTTCCCTHHHHHHHH
T ss_pred HHHHCcHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHC-cc---cHHHHHHHHHHHHHHHHhccccCCHHHHHHHHH
Confidence 36789999999999999999999 9999999999999999 77 899999999999 777 78999999999
Q ss_pred HHHHhCCCCHHHHHHHHHHHHHcCCHH--HHHHHHHHHHhhCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy4703 72 KSLEIVPDDPKALFRRCQAYEAIGKFE--EAYTDAKHIHRVEPTNKAIQPVLSRLFAIVTKRMQENEQLQNKVHNMFKYV 149 (401)
Q Consensus 72 kAL~ldP~~~kA~~~~a~a~~~lg~~e--eA~~~~~kal~l~P~~~~~~~~L~~l~~~~~~~~~a~~~~~~~~~~~~~~~ 149 (401)
++++.+|.+..+|+.|+.++..+|.++ +++..+.++++.+|.|-.++...+.+...++.... .. .-....++++.+
T Consensus 135 ~~l~~~pkny~aW~~R~~vl~~l~~~~~~~EL~~~~~~i~~d~~N~sAW~~R~~ll~~l~~~~~-~~-~~~eEl~~~~~a 212 (306)
T 3dra_A 135 AMLSSDPKNHHVWSYRKWLVDTFDLHNDAKELSFVDKVIDTDLKNNSAWSHRFFLLFSKKHLAT-DN-TIDEELNYVKDK 212 (306)
T ss_dssp HHHHHCTTCHHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHSSGGGCC-HH-HHHHHHHHHHHH
T ss_pred HHHHhCCCCHHHHHHHHHHHHHhcccChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhccccch-hh-hHHHHHHHHHHH
Confidence 999999999999999999999999999 99999999999999999999888777766543100 00 112234456666
Q ss_pred hc-CCCChhHHHHHHHHHHHhhh
Q psy4703 150 FD-TSAPMDKRVTAVNNLVVLAR 171 (401)
Q Consensus 150 ~~-~~~~~~~~~~a~~~L~~l~~ 171 (401)
+. .|.+...-......+...++
T Consensus 213 I~~~p~n~SaW~y~~~ll~~~~~ 235 (306)
T 3dra_A 213 IVKCPQNPSTWNYLLGIHERFDR 235 (306)
T ss_dssp HHHCSSCHHHHHHHHHHHHHTTC
T ss_pred HHhCCCCccHHHHHHHHHHhcCC
Confidence 66 45554444444444444444
No 134
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=99.26 E-value=4e-11 Score=101.80 Aligned_cols=105 Identities=19% Similarity=0.238 Sum_probs=95.3
Q ss_pred ccCChhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcCCCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH
Q psy4703 2 IDNNMNDYNKLKESGNSAFKQGDYETALDFYTKALKVTAEESHERATCLKNRAAVYLKQNQNDKVIEDCSKSLEIVPDDP 81 (401)
Q Consensus 2 i~~~p~~a~~l~~~Gn~~~~~g~y~eAi~~y~~Al~l~~p~~~~~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~ldP~~~ 81 (401)
++.+|.++..+...|..++..|+|++|+.+|.+++.++ |+ +..+++++|.+|..+|++++|+..+.++++++|.+.
T Consensus 40 l~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~-~~---~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~p~~~ 115 (166)
T 1a17_A 40 IELNPSNAIYYGNRSLAYLRTECYGYALGDATRAIELD-KK---YIKGYYRRAASNMALGKFRAALRDYETVVKVKPHDK 115 (166)
T ss_dssp HHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TT---CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCH
T ss_pred HHhCCCChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-cc---cHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCH
Confidence 35678889999999999999999999999999999999 76 788999999999999999999999999999999999
Q ss_pred HHHHH--HHHHHHHcCCHHHHHHHHHHHHhh
Q psy4703 82 KALFR--RCQAYEAIGKFEEAYTDAKHIHRV 110 (401)
Q Consensus 82 kA~~~--~a~a~~~lg~~eeA~~~~~kal~l 110 (401)
.++.. ++..+...|++++|+..++++..+
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~ 146 (166)
T 1a17_A 116 DAKMKYQECNKIVKQKAFERAIAGDEHKRSV 146 (166)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcccchHHH
Confidence 98855 555588999999999999887654
No 135
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=99.25 E-value=8.5e-11 Score=95.77 Aligned_cols=101 Identities=15% Similarity=0.252 Sum_probs=92.1
Q ss_pred CcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCccHHHHHH
Q psy4703 43 SHERATCLKNRAAVYLKQNQNDKVIEDCSKSLEIVPDDPKALFRRCQAYEAIGKFEEAYTDAKHIHRVEPTNKAIQPVLS 122 (401)
Q Consensus 43 ~~~~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~ldP~~~kA~~~~a~a~~~lg~~eeA~~~~~kal~l~P~~~~~~~~L~ 122 (401)
.+.....++++|.+++..|+|++|+..++++++.+|.+..+++.+|.++..+|++++|+..|+++++++|++..++..++
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la 91 (133)
T 2lni_A 12 NPDLALMVKNKGNECFQKGDYPQAMKHYTEAIKRNPKDAKLYSNRAACYTKLLEFQLALKDCEECIQLEPTFIKGYTRKA 91 (133)
T ss_dssp SSCHHHHHHHHHHHHHHTTCSHHHHHHHHHHHTTCTTCHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred CcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCchHHHHHHH
Confidence 46689999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q psy4703 123 RLFAIVTKRMQENEQLQNKVHNMFKYVFD 151 (401)
Q Consensus 123 ~l~~~~~~~~~a~~~~~~~~~~~~~~~~~ 151 (401)
.++...++..++.. +|+.+..
T Consensus 92 ~~~~~~~~~~~A~~--------~~~~~~~ 112 (133)
T 2lni_A 92 AALEAMKDYTKAMD--------VYQKALD 112 (133)
T ss_dssp HHHHHTTCHHHHHH--------HHHHHHH
T ss_pred HHHHHHhhHHHHHH--------HHHHHHH
Confidence 99988887755444 6666666
No 136
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=99.24 E-value=1.1e-10 Score=96.44 Aligned_cols=93 Identities=11% Similarity=0.053 Sum_probs=87.6
Q ss_pred cchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCccHHHHHHH
Q psy4703 44 HERATCLKNRAAVYLKQNQNDKVIEDCSKSLEIVPDDPKALFRRCQAYEAIGKFEEAYTDAKHIHRVEPTNKAIQPVLSR 123 (401)
Q Consensus 44 ~~~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~ldP~~~kA~~~~a~a~~~lg~~eeA~~~~~kal~l~P~~~~~~~~L~~ 123 (401)
+..+..++++|.+++..|+|++|+..|.+++.++|+++.+++.+|.++..+|+|++|+.+|+++++++|++..++..++.
T Consensus 6 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~ 85 (137)
T 3q49_B 6 SPSAQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLGQ 85 (137)
T ss_dssp CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhCcCcHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCchhHHHHHHHHH
Confidence 34789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHH
Q psy4703 124 LFAIVTKRMQENE 136 (401)
Q Consensus 124 l~~~~~~~~~a~~ 136 (401)
++...++...+..
T Consensus 86 ~~~~~~~~~~A~~ 98 (137)
T 3q49_B 86 CQLEMESYDEAIA 98 (137)
T ss_dssp HHHHTTCHHHHHH
T ss_pred HHHHHhhHHHHHH
Confidence 9999888765544
No 137
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=99.23 E-value=1e-10 Score=89.58 Aligned_cols=86 Identities=33% Similarity=0.479 Sum_probs=81.4
Q ss_pred hhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcCCCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHH
Q psy4703 6 MNDYNKLKESGNSAFKQGDYETALDFYTKALKVTAEESHERATCLKNRAAVYLKQNQNDKVIEDCSKSLEIVPDDPKALF 85 (401)
Q Consensus 6 p~~a~~l~~~Gn~~~~~g~y~eAi~~y~~Al~l~~p~~~~~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~ldP~~~kA~~ 85 (401)
|..+..+...|..++..|+|++|+.+|.++++++ |+ +..+++++|.+|..+|++++|+..++++++++|+++.++.
T Consensus 6 ~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~-~~---~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~ 81 (91)
T 1na3_A 6 GNSAEAWYNLGNAYYKQGDYDEAIEYYQKALELD-PN---NAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAKQ 81 (91)
T ss_dssp CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TT---CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred cccHHHHHHHHHHHHHccCHHHHHHHHHHHHhcC-CC---CHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCHHHHH
Confidence 4678899999999999999999999999999999 76 7889999999999999999999999999999999999999
Q ss_pred HHHHHHHHcC
Q psy4703 86 RRCQAYEAIG 95 (401)
Q Consensus 86 ~~a~a~~~lg 95 (401)
.+|.++..+|
T Consensus 82 ~l~~~~~~~g 91 (91)
T 1na3_A 82 NLGNAKQKQG 91 (91)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHHHHhcC
Confidence 9999998765
No 138
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=99.23 E-value=5.6e-10 Score=103.68 Aligned_cols=129 Identities=12% Similarity=0.167 Sum_probs=112.0
Q ss_pred hhHHHHHHHHHHHHHH----cCCHHHHHHHHHHHHhhcCCCCcchHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhC
Q psy4703 6 MNDYNKLKESGNSAFK----QGDYETALDFYTKALKVTAEESHERATCLKNRAAVYLK----QNQNDKVIEDCSKSLEIV 77 (401)
Q Consensus 6 p~~a~~l~~~Gn~~~~----~g~y~eAi~~y~~Al~l~~p~~~~~~~~~~n~a~~y~k----lg~y~~Ai~~~~kAL~ld 77 (401)
|.++.++...|..+.. .|++++|+.+|+++++.. ++.+++++|.+|.. .+++++|+..|+++++.+
T Consensus 35 ~~~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~------~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~ 108 (273)
T 1ouv_A 35 LKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLN------YSNGCHLLGNLYYSGQGVSQNTNKALQYYSKACDLK 108 (273)
T ss_dssp TTCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT------CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT
T ss_pred CCCHHHHHHHHHHHHcCCCcCCCHHHHHHHHHHHHHCC------CHHHHHHHHHHHhCCCCcccCHHHHHHHHHHHHHcC
Confidence 5667889999999999 999999999999999998 78899999999999 999999999999999984
Q ss_pred CCCHHHHHHHHHHHHH----cCCHHHHHHHHHHHHhhCCCCccHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHh
Q psy4703 78 PDDPKALFRRCQAYEA----IGKFEEAYTDAKHIHRVEPTNKAIQPVLSRLFAI----VTKRMQENEQLQNKVHNMFKYV 149 (401)
Q Consensus 78 P~~~kA~~~~a~a~~~----lg~~eeA~~~~~kal~l~P~~~~~~~~L~~l~~~----~~~~~~a~~~~~~~~~~~~~~~ 149 (401)
++.+++.+|.+|.. .+++++|+.+|+++++.+ +..+...++.++.. .++..+ +..+|+.+
T Consensus 109 --~~~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~~--~~~a~~~lg~~~~~~~~~~~~~~~--------A~~~~~~a 176 (273)
T 1ouv_A 109 --YAEGCASLGGIYHDGKVVTRDFKKAVEYFTKACDLN--DGDGCTILGSLYDAGRGTPKDLKK--------ALASYDKA 176 (273)
T ss_dssp --CHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHTSSSCCCHHH--------HHHHHHHH
T ss_pred --CccHHHHHHHHHHcCCCcccCHHHHHHHHHHHHhcC--cHHHHHHHHHHHHcCCCCCCCHHH--------HHHHHHHH
Confidence 89999999999999 999999999999999986 56778888887766 455433 33466666
Q ss_pred hcC
Q psy4703 150 FDT 152 (401)
Q Consensus 150 ~~~ 152 (401)
.+.
T Consensus 177 ~~~ 179 (273)
T 1ouv_A 177 CDL 179 (273)
T ss_dssp HHT
T ss_pred HHC
Confidence 653
No 139
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=99.23 E-value=6.1e-11 Score=103.57 Aligned_cols=98 Identities=16% Similarity=0.168 Sum_probs=88.5
Q ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-------CHH-----HHHHHHHHHHHcCCHHHHHHHHHHHHhh---
Q psy4703 46 RATCLKNRAAVYLKQNQNDKVIEDCSKSLEIVPD-------DPK-----ALFRRCQAYEAIGKFEEAYTDAKHIHRV--- 110 (401)
Q Consensus 46 ~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~ldP~-------~~k-----A~~~~a~a~~~lg~~eeA~~~~~kal~l--- 110 (401)
.+..+.++|..++++|+|++|+..|++||+++|+ +.. +|.++|.++.++|+|++|+.+|.+++++
T Consensus 10 ~a~~~~~~G~~l~~~g~~eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~~Lgr~~eAl~~~~kAL~l~n~ 89 (159)
T 2hr2_A 10 GAYLALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHYFNR 89 (159)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhc
Confidence 4678899999999999999999999999999999 544 9999999999999999999999999999
Q ss_pred ----CCCCccHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q psy4703 111 ----EPTNKAIQ----PVLSRLFAIVTKRMQENEQLQNKVHNMFKYVFD 151 (401)
Q Consensus 111 ----~P~~~~~~----~~L~~l~~~~~~~~~a~~~~~~~~~~~~~~~~~ 151 (401)
+|++..++ ...+.++..+++..++.. .|+.++.
T Consensus 90 ~~e~~pd~~~A~~~~~~~rG~aL~~lgr~eEAl~--------~y~kAle 130 (159)
T 2hr2_A 90 RGELNQDEGKLWISAVYSRALALDGLGRGAEAMP--------EFKKVVE 130 (159)
T ss_dssp HCCTTSTHHHHHHHHHHHHHHHHHHTTCHHHHHH--------HHHHHHH
T ss_pred cccCCCchHHHHHHHHHhHHHHHHHCCCHHHHHH--------HHHHHHh
Confidence 99999999 999999999998876655 5555554
No 140
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=99.23 E-value=3.6e-10 Score=91.16 Aligned_cols=119 Identities=14% Similarity=0.220 Sum_probs=99.3
Q ss_pred cchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCccHHHHHHH
Q psy4703 44 HERATCLKNRAAVYLKQNQNDKVIEDCSKSLEIVPDDPKALFRRCQAYEAIGKFEEAYTDAKHIHRVEPTNKAIQPVLSR 123 (401)
Q Consensus 44 ~~~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~ldP~~~kA~~~~a~a~~~lg~~eeA~~~~~kal~l~P~~~~~~~~L~~ 123 (401)
+.....+..+|.+++..|+|++|+..+++++..+|.++.+++.+|.++..+|++++|+..++++++++|++..++..++.
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~ 88 (131)
T 2vyi_A 9 SAEAERLKTEGNEQMKVENFEAAVHFYGKAIELNPANAVYFCNRAAAYSKLGNYAGAVQDCERAICIDPAYSKAYGRMGL 88 (131)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred hhhhHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhhchHHHHHHHHHHHhcCccCHHHHHHHHH
Confidence 44788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhc-CCCChhHHHHHHHHHHHhh
Q psy4703 124 LFAIVTKRMQENEQLQNKVHNMFKYVFD-TSAPMDKRVTAVNNLVVLA 170 (401)
Q Consensus 124 l~~~~~~~~~a~~~~~~~~~~~~~~~~~-~~~~~~~~~~a~~~L~~l~ 170 (401)
++...++...+.. +|+.+.. .|.+..........+..++
T Consensus 89 ~~~~~~~~~~A~~--------~~~~~~~~~p~~~~~~~~l~~~~~~~~ 128 (131)
T 2vyi_A 89 ALSSLNKHVEAVA--------YYKKALELDPDNETYKSNLKIAELKLR 128 (131)
T ss_dssp HHHHTTCHHHHHH--------HHHHHHHHSTTCHHHHHHHHHHHHHHT
T ss_pred HHHHhCCHHHHHH--------HHHHHHhcCccchHHHHHHHHHHHHHh
Confidence 9888887754444 6677766 4444444444444444333
No 141
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=99.22 E-value=5.8e-11 Score=116.25 Aligned_cols=108 Identities=18% Similarity=0.178 Sum_probs=96.6
Q ss_pred ChhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcC--CCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHH-----hC
Q psy4703 5 NMNDYNKLKESGNSAFKQGDYETALDFYTKALKVTA--EESHERATCLKNRAAVYLKQNQNDKVIEDCSKSLE-----IV 77 (401)
Q Consensus 5 ~p~~a~~l~~~Gn~~~~~g~y~eAi~~y~~Al~l~~--p~~~~~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~-----ld 77 (401)
.+..+..+...|..+...|+|++|+.+|.+++++.+ ++.+..+.++.++|.+|..+|+|++|+.+++++++ .+
T Consensus 180 ~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~ 259 (383)
T 3ulq_A 180 NIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYEDAIPYFKRAIAVFEESNI 259 (383)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC
T ss_pred hHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhcc
Confidence 455678899999999999999999999999999862 22344567999999999999999999999999999 46
Q ss_pred -CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCC
Q psy4703 78 -PDDPKALFRRCQAYEAIGKFEEAYTDAKHIHRVEP 112 (401)
Q Consensus 78 -P~~~kA~~~~a~a~~~lg~~eeA~~~~~kal~l~P 112 (401)
|..+.+++++|.+|..+|++++|+..+++++++.+
T Consensus 260 ~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~ 295 (383)
T 3ulq_A 260 LPSLPQAYFLITQIHYKLGKIDKAHEYHSKGMAYSQ 295 (383)
T ss_dssp GGGHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
Confidence 88899999999999999999999999999999854
No 142
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=99.22 E-value=6e-11 Score=102.02 Aligned_cols=100 Identities=16% Similarity=0.160 Sum_probs=91.1
Q ss_pred chHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh------------------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHH
Q psy4703 45 ERATCLKNRAAVYLKQNQNDKVIEDCSKSLEI------------------VPDDPKALFRRCQAYEAIGKFEEAYTDAKH 106 (401)
Q Consensus 45 ~~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~l------------------dP~~~kA~~~~a~a~~~lg~~eeA~~~~~k 106 (401)
..+..+.++|..+++.|+|++|+..|++++.+ +|.++.+|+++|.+|..+|+|++|+.+|++
T Consensus 9 ~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~ 88 (162)
T 3rkv_A 9 KSVEALRQKGNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLNIGDLHEAEETSSE 88 (162)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHH
Confidence 36788999999999999999999999999999 788889999999999999999999999999
Q ss_pred HHhhCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q psy4703 107 IHRVEPTNKAIQPVLSRLFAIVTKRMQENEQLQNKVHNMFKYVFDT 152 (401)
Q Consensus 107 al~l~P~~~~~~~~L~~l~~~~~~~~~a~~~~~~~~~~~~~~~~~~ 152 (401)
+++++|++..++..++.++..+++...+.. .|+.++..
T Consensus 89 al~~~p~~~~a~~~~g~~~~~~g~~~~A~~--------~~~~al~l 126 (162)
T 3rkv_A 89 VLKREETNEKALFRRAKARIAAWKLDEAEE--------DLKLLLRN 126 (162)
T ss_dssp HHHHSTTCHHHHHHHHHHHHHTTCHHHHHH--------HHHHHHHH
T ss_pred HHhcCCcchHHHHHHHHHHHHHhcHHHHHH--------HHHHHHhc
Confidence 999999999999999999999998865544 67777773
No 143
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=99.22 E-value=3.6e-09 Score=103.19 Aligned_cols=124 Identities=12% Similarity=0.030 Sum_probs=116.2
Q ss_pred CccCChhHHHHHHHHHHHHHHcCC----------HHHHHHHHHHHHhhcCCCCcchHHHHHHHHHHHHHcC--CHHHHHH
Q psy4703 1 MIDNNMNDYNKLKESGNSAFKQGD----------YETALDFYTKALKVTAEESHERATCLKNRAAVYLKQN--QNDKVIE 68 (401)
Q Consensus 1 ~i~~~p~~a~~l~~~Gn~~~~~g~----------y~eAi~~y~~Al~l~~p~~~~~~~~~~n~a~~y~klg--~y~~Ai~ 68 (401)
+|..+|++..+|..++..+...|. +++++.++..++..+ |. +..+|..|+.++..++ .+++++.
T Consensus 56 ~L~~nP~~ytaWn~Rr~iL~~l~~~~~~~~~~~~l~~EL~~~~~~L~~~-PK---ny~aW~hR~wlL~~l~~~~~~~EL~ 131 (331)
T 3dss_A 56 ILGANPDFATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVN-PK---SYGTWHHRCWLLSRLPEPNWARELE 131 (331)
T ss_dssp HHTTCTTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHC-TT---CHHHHHHHHHHHHHCSSCCHHHHHH
T ss_pred HHHHCchhHHHHHHHHHHHHHhcccccchhhhHHHHHHHHHHHHHHHhC-CC---CHHHHHHHHHHHhccCcccHHHHHH
Confidence 367899999999999999988776 789999999999999 77 9999999999999999 4999999
Q ss_pred HHHHHHHhCCCCHHHHHHHHHHHHHcCC-HHHHHHHHHHHHhhCCCCccHHHHHHHHHHHH
Q psy4703 69 DCSKSLEIVPDDPKALFRRCQAYEAIGK-FEEAYTDAKHIHRVEPTNKAIQPVLSRLFAIV 128 (401)
Q Consensus 69 ~~~kAL~ldP~~~kA~~~~a~a~~~lg~-~eeA~~~~~kal~l~P~~~~~~~~L~~l~~~~ 128 (401)
.|+++++.+|.|..||..|+.++..+|. +++++.++.++++.+|+|..++...+.+...+
T Consensus 132 ~~~k~l~~dprNy~AW~~R~~vl~~l~~~~~eel~~~~~~I~~~p~N~SAW~~R~~ll~~l 192 (331)
T 3dss_A 132 LCARFLEADERNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNYSSWHYRSCLLPQL 192 (331)
T ss_dssp HHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCCHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999 69999999999999999999999998888776
No 144
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=99.22 E-value=2.1e-11 Score=95.81 Aligned_cols=91 Identities=16% Similarity=0.155 Sum_probs=73.1
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHhhcCCCCcchHH-HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q psy4703 13 KESGNSAFKQGDYETALDFYTKALKVTAEESHERAT-CLKNRAAVYLKQNQNDKVIEDCSKSLEIVPDDPKALFRRCQAY 91 (401)
Q Consensus 13 ~~~Gn~~~~~g~y~eAi~~y~~Al~l~~p~~~~~~~-~~~n~a~~y~klg~y~~Ai~~~~kAL~ldP~~~kA~~~~a~a~ 91 (401)
...|..++..|+|++|+..|+++++.+ |+ +.. +++++|.+|+.+|++++|+.+|+++++++|++..++++
T Consensus 4 ~~~a~~~~~~~~~~~A~~~~~~al~~~-p~---~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~----- 74 (99)
T 2kc7_A 4 LKTIKELINQGDIENALQALEEFLQTE-PV---GKDEAYYLMGNAYRKLGDWQKALNNYQSAIELNPDSPALQAR----- 74 (99)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHC-SS---THHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTHHHHH-----
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHC-CC---cHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHHHH-----
Confidence 567888888888888888888888888 65 667 88888888888888888888888888888888877754
Q ss_pred HHcCCHHHHHHHHHHHHhhCCCCc
Q psy4703 92 EAIGKFEEAYTDAKHIHRVEPTNK 115 (401)
Q Consensus 92 ~~lg~~eeA~~~~~kal~l~P~~~ 115 (401)
+.+.+|+..|+++...+|+++
T Consensus 75 ---~~~~~a~~~~~~~~~~~p~~~ 95 (99)
T 2kc7_A 75 ---KMVMDILNFYNKDMYNQLEHH 95 (99)
T ss_dssp ---HHHHHHHHHHCCTTHHHHCCS
T ss_pred ---HHHHHHHHHHHHHhccCcccc
Confidence 567778888888887777664
No 145
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=99.21 E-value=1.6e-10 Score=96.53 Aligned_cols=130 Identities=12% Similarity=0.137 Sum_probs=105.1
Q ss_pred hhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcCCC---CcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC--
Q psy4703 6 MNDYNKLKESGNSAFKQGDYETALDFYTKALKVTAEE---SHERATCLKNRAAVYLKQNQNDKVIEDCSKSLEIVPDD-- 80 (401)
Q Consensus 6 p~~a~~l~~~Gn~~~~~g~y~eAi~~y~~Al~l~~p~---~~~~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~ldP~~-- 80 (401)
+..+..+...|..++..|+|++|+.+|.+++++. +. ......++.++|.+|..+|++++|+..+++++++.+..
T Consensus 6 ~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~-~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~ 84 (164)
T 3ro3_A 6 AAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIA-KEFGDKAAERIAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKD 84 (164)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH-HHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHH-HHhCCchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCC
Confidence 4567889999999999999999999999999987 32 22344689999999999999999999999999986543
Q ss_pred ----HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC------ccHHHHHHHHHHHHHHHHHHHH
Q psy4703 81 ----PKALFRRCQAYEAIGKFEEAYTDAKHIHRVEPTN------KAIQPVLSRLFAIVTKRMQENE 136 (401)
Q Consensus 81 ----~kA~~~~a~a~~~lg~~eeA~~~~~kal~l~P~~------~~~~~~L~~l~~~~~~~~~a~~ 136 (401)
..+++.+|.++..+|++++|+..+++++++.+.. ..+...++.++...++..++..
T Consensus 85 ~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~ 150 (164)
T 3ro3_A 85 RAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELKDRIGEGRACWSLGNAYTALGNHDQAMH 150 (164)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHccchHhHHHHHHHHHHHHHHccCHHHHHH
Confidence 6789999999999999999999999999875432 2345556666666655544433
No 146
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=99.21 E-value=1.3e-10 Score=92.32 Aligned_cols=69 Identities=14% Similarity=0.199 Sum_probs=67.3
Q ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC
Q psy4703 46 RATCLKNRAAVYLKQNQNDKVIEDCSKSLEIVPDDPKALFRRCQAYEAIGKFEEAYTDAKHIHRVEPTN 114 (401)
Q Consensus 46 ~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~ldP~~~kA~~~~a~a~~~lg~~eeA~~~~~kal~l~P~~ 114 (401)
.+..++++|.+++..|+|++|+..|+++++++|+++.+++++|.++..+|+|++|+.+|+++++++|++
T Consensus 3 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~ 71 (111)
T 2l6j_A 3 QFEKQKEQGNSLFKQGLYREAVHCYDQLITAQPQNPVGYSNKAMALIKLGEYTQAIQMCQQGLRYTSTA 71 (111)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCSST
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCc
Confidence 577899999999999999999999999999999999999999999999999999999999999999998
No 147
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=99.19 E-value=5.7e-10 Score=88.42 Aligned_cols=101 Identities=15% Similarity=0.225 Sum_probs=91.0
Q ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCccHHHHHHHHH
Q psy4703 46 RATCLKNRAAVYLKQNQNDKVIEDCSKSLEIVPDDPKALFRRCQAYEAIGKFEEAYTDAKHIHRVEPTNKAIQPVLSRLF 125 (401)
Q Consensus 46 ~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~ldP~~~kA~~~~a~a~~~lg~~eeA~~~~~kal~l~P~~~~~~~~L~~l~ 125 (401)
.+..++.+|.+++..|+|++|+..+++++..+|.++.+++.+|.++..+|++++|+..++++++++|++..++..++.++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~ 82 (118)
T 1elw_A 3 QVNELKEKGNKALSVGNIDDALQCYSEAIKLDPHNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWGKGYSRKAAAL 82 (118)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHhhccHHHHHHHHHHHHHhCcccHHHHHHHHHHH
Confidence 56789999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCCC
Q psy4703 126 AIVTKRMQENEQLQNKVHNMFKYVFDTSA 154 (401)
Q Consensus 126 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~~ 154 (401)
...++..++ ..+|+.+....+
T Consensus 83 ~~~~~~~~A--------~~~~~~~~~~~~ 103 (118)
T 1elw_A 83 EFLNRFEEA--------KRTYEEGLKHEA 103 (118)
T ss_dssp HHTTCHHHH--------HHHHHHHHTTCT
T ss_pred HHHhhHHHH--------HHHHHHHHHcCC
Confidence 888776544 346777777433
No 148
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=99.18 E-value=5.6e-09 Score=98.66 Aligned_cols=172 Identities=13% Similarity=0.008 Sum_probs=125.6
Q ss_pred ChhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcCCCCc---chHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC-
Q psy4703 5 NMNDYNKLKESGNSAFKQGDYETALDFYTKALKVTAEESH---ERATCLKNRAAVYLKQNQNDKVIEDCSKSLEIVPDD- 80 (401)
Q Consensus 5 ~p~~a~~l~~~Gn~~~~~g~y~eAi~~y~~Al~l~~p~~~---~~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~ldP~~- 80 (401)
+|.....+...+..++..|+|++|+..|.++++.. +..+ .....++.+|.+|...|+|++|+..+.+++++.+..
T Consensus 71 ~~~~~~~l~~~~~~~~~~~~y~~A~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~ 149 (293)
T 2qfc_A 71 DIERKKQFKDQVIMLCKQKRYKEIYNKVWNELKKE-EYHPEFQQFLQWQYYVAAYVLKKVDYEYCILELKKLLNQQLTGI 149 (293)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTC-CCCHHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHTTCCCSS
T ss_pred chhHHHHHHHHHHHHHHhhhHHHHHHHHHHHhccc-cCChhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhcCC
Confidence 35667788899999999999999999999999988 5422 234567789999999999999999999999876543
Q ss_pred -----HHHHHHHHHHHHHcCCHHHHHHHHHHHH---hhCCCCc----cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy4703 81 -----PKALFRRCQAYEAIGKFEEAYTDAKHIH---RVEPTNK----AIQPVLSRLFAIVTKRMQENEQLQNKVHNMFKY 148 (401)
Q Consensus 81 -----~kA~~~~a~a~~~lg~~eeA~~~~~kal---~l~P~~~----~~~~~L~~l~~~~~~~~~a~~~~~~~~~~~~~~ 148 (401)
..+++.+|.+|..+|+|++|+..|++++ +..|++. .+...++.++...++..++...+.+ +..+...
T Consensus 150 ~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y~~Al~~~~k-al~~~~~ 228 (293)
T 2qfc_A 150 DVYQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRYEESLYQVNK-AIEISCR 228 (293)
T ss_dssp CTTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH-HHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCccccchHHHHHhHHHHHHHHhhHHHHHHHHHH-HHHHHHh
Confidence 6789999999999999999999999999 5566653 4777888888888888766663322 2222211
Q ss_pred hhcCCCChhHHHHHHHHHHHhhhcchhhHH
Q psy4703 149 VFDTSAPMDKRVTAVNNLVVLAREMSGAEM 178 (401)
Q Consensus 149 ~~~~~~~~~~~~~a~~~L~~l~~~~~gae~ 178 (401)
.................+..+++.+.+...
T Consensus 229 ~~~~~~~~~~~~~lg~~y~~~g~~~~Ai~~ 258 (293)
T 2qfc_A 229 INSMALIGQLYYQRGECLRKLEYEEAEIED 258 (293)
T ss_dssp TTBCSSHHHHHHHHHHHHHHTTCCHHHHHH
T ss_pred cCcHHHHHHHHHHHHHHHHHcCCcHHHHHH
Confidence 111111133345555566667776555344
No 149
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=99.17 E-value=1.2e-09 Score=106.50 Aligned_cols=122 Identities=9% Similarity=0.073 Sum_probs=113.0
Q ss_pred ccCChhHHHHHHHHHHHHHHcC--CHHHHHHHHHHHHhhcCCCCcchHHHHHHHHHHHHHcCC-HHHHHHHHHHHHHhCC
Q psy4703 2 IDNNMNDYNKLKESGNSAFKQG--DYETALDFYTKALKVTAEESHERATCLKNRAAVYLKQNQ-NDKVIEDCSKSLEIVP 78 (401)
Q Consensus 2 i~~~p~~a~~l~~~Gn~~~~~g--~y~eAi~~y~~Al~l~~p~~~~~~~~~~n~a~~y~klg~-y~~Ai~~~~kAL~ldP 78 (401)
+..+|++..+|..++..+...| +|++++.++.++++.+ |. +..+|.+++.+...+|. +++++++++++|+.+|
T Consensus 101 L~~~PKny~aW~hR~wlL~~l~~~~~~~EL~~~~k~l~~d-pr---Ny~AW~~R~~vl~~l~~~~~eel~~~~~~I~~~p 176 (331)
T 3dss_A 101 LRVNPKSYGTWHHRCWLLSRLPEPNWARELELCARFLEAD-ER---NFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNF 176 (331)
T ss_dssp HHHCTTCHHHHHHHHHHHHHCSSCCHHHHHHHHHHHHHHC-TT---CHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCS
T ss_pred HHhCCCCHHHHHHHHHHHhccCcccHHHHHHHHHHHHHhC-CC---CHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHCC
Confidence 5679999999999999999999 4999999999999999 77 99999999999999999 6999999999999999
Q ss_pred CCHHHHHHHHHHHHHc--------------CCHHHHHHHHHHHHhhCCCCccHHHHHHHHHHH
Q psy4703 79 DDPKALFRRCQAYEAI--------------GKFEEAYTDAKHIHRVEPTNKAIQPVLSRLFAI 127 (401)
Q Consensus 79 ~~~kA~~~~a~a~~~l--------------g~~eeA~~~~~kal~l~P~~~~~~~~L~~l~~~ 127 (401)
.|..||..|+.++..+ +.+++++.++.+++.++|+|..++..++-+...
T Consensus 177 ~N~SAW~~R~~ll~~l~~~~~~~~~~~~~~~~~~eEle~~~~ai~~~P~d~SaW~Y~r~ll~~ 239 (331)
T 3dss_A 177 SNYSSWHYRSCLLPQLHPQPDSGPQGRLPENVLLKELELVQNAFFTDPNDQSAWFYHRWLLGA 239 (331)
T ss_dssp CCHHHHHHHHHHHHHHSCCC------CCCHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHS
T ss_pred CCHHHHHHHHHHHHHhhhccccccccccchHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHh
Confidence 9999999999999998 569999999999999999999999876655543
No 150
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=99.17 E-value=6.7e-11 Score=93.21 Aligned_cols=98 Identities=12% Similarity=0.110 Sum_probs=89.4
Q ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC--CccHHHHHHH
Q psy4703 46 RATCLKNRAAVYLKQNQNDKVIEDCSKSLEIVPDDPKALFRRCQAYEAIGKFEEAYTDAKHIHRVEPT--NKAIQPVLSR 123 (401)
Q Consensus 46 ~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~ldP~~~kA~~~~a~a~~~lg~~eeA~~~~~kal~l~P~--~~~~~~~L~~ 123 (401)
+..+++++|.+++..|+|++|+..++++++++|.+..+++.+|.++..+|++++|+..|+++++++|+ +..++..++.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~l~~ 84 (112)
T 2kck_A 5 NPEEYYLEGVLQYDAGNYTESIDLFEKAIQLDPEESKYWLMKGKALYNLERYEEAVDCYNYVINVIEDEYNKDVWAAKAD 84 (112)
T ss_dssp STTGGGGHHHHHHSSCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSCCTTCHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcccchHHHHHHHHH
Confidence 67789999999999999999999999999999999999999999999999999999999999999999 9999999999
Q ss_pred HHHHH-HHHHHHHHHHHHHHHHHHHHhhc
Q psy4703 124 LFAIV-TKRMQENEQLQNKVHNMFKYVFD 151 (401)
Q Consensus 124 l~~~~-~~~~~a~~~~~~~~~~~~~~~~~ 151 (401)
++... ++..++. ++++.+..
T Consensus 85 ~~~~~~~~~~~A~--------~~~~~~~~ 105 (112)
T 2kck_A 85 ALRYIEGKEVEAE--------IAEARAKL 105 (112)
T ss_dssp HHTTCSSCSHHHH--------HHHHHHGG
T ss_pred HHHHHhCCHHHHH--------HHHHHHhh
Confidence 98888 7765443 36777766
No 151
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=99.16 E-value=3.5e-10 Score=110.77 Aligned_cols=108 Identities=18% Similarity=0.152 Sum_probs=97.3
Q ss_pred hhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcC--CCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHH-----hCC
Q psy4703 6 MNDYNKLKESGNSAFKQGDYETALDFYTKALKVTA--EESHERATCLKNRAAVYLKQNQNDKVIEDCSKSLE-----IVP 78 (401)
Q Consensus 6 p~~a~~l~~~Gn~~~~~g~y~eAi~~y~~Al~l~~--p~~~~~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~-----ldP 78 (401)
+..+..+...|..+...|+|++|+.+|.+++++.+ ++......++.++|.+|..+|++++|+.+++++++ .+|
T Consensus 179 ~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~ 258 (378)
T 3q15_A 179 IRTIQSLFVIAGNYDDFKHYDKALPHLEAALELAMDIQNDRFIAISLLNIANSYDRSGDDQMAVEHFQKAAKVSREKVPD 258 (378)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHCGG
T ss_pred hhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhCCh
Confidence 35678889999999999999999999999999862 12234678899999999999999999999999999 788
Q ss_pred CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC
Q psy4703 79 DDPKALFRRCQAYEAIGKFEEAYTDAKHIHRVEPT 113 (401)
Q Consensus 79 ~~~kA~~~~a~a~~~lg~~eeA~~~~~kal~l~P~ 113 (401)
..+.+++.+|.++..+|++++|+..+++++++.+.
T Consensus 259 ~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 293 (378)
T 3q15_A 259 LLPKVLFGLSWTLCKAGQTQKAFQFIEEGLDHITA 293 (378)
T ss_dssp GHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCT
T ss_pred hHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Confidence 88999999999999999999999999999999764
No 152
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=99.16 E-value=5.2e-10 Score=91.32 Aligned_cols=99 Identities=19% Similarity=0.101 Sum_probs=86.7
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH---HHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC---ccHHHHHH
Q psy4703 49 CLKNRAAVYLKQNQNDKVIEDCSKSLEIVPDDP---KALFRRCQAYEAIGKFEEAYTDAKHIHRVEPTN---KAIQPVLS 122 (401)
Q Consensus 49 ~~~n~a~~y~klg~y~~Ai~~~~kAL~ldP~~~---kA~~~~a~a~~~lg~~eeA~~~~~kal~l~P~~---~~~~~~L~ 122 (401)
.++++|.+++..|+|++|+..|+++++.+|+++ .+++.+|.++..+|+|++|+..|+++++.+|++ +.+...++
T Consensus 4 ~~~~~a~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~la 83 (129)
T 2xev_A 4 TAYNVAFDALKNGKYDDASQLFLSFLELYPNGVYTPNALYWLGESYYATRNFQLAEAQFRDLVSRYPTHDKAAGGLLKLG 83 (129)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHCCCCcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHHCCCCcccHHHHHHHH
Confidence 578899999999999999999999999999998 899999999999999999999999999999999 77788899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCC
Q psy4703 123 RLFAIVTKRMQENEQLQNKVHNMFKYVFDTSAP 155 (401)
Q Consensus 123 ~l~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ 155 (401)
.++...++..++.. +|+.+....++
T Consensus 84 ~~~~~~g~~~~A~~--------~~~~~~~~~p~ 108 (129)
T 2xev_A 84 LSQYGEGKNTEAQQ--------TLQQVATQYPG 108 (129)
T ss_dssp HHHHHTTCHHHHHH--------HHHHHHHHSTT
T ss_pred HHHHHcCCHHHHHH--------HHHHHHHHCCC
Confidence 98888887755444 67777663333
No 153
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=99.15 E-value=1.9e-10 Score=111.23 Aligned_cols=125 Identities=12% Similarity=0.004 Sum_probs=117.7
Q ss_pred ccCChhHHHHHHHHHHHH----HHc---CCHHHHHHHHHHHHhhcCCCCcchHHHHHHHHHHHHHcCCHH--HHHHHHHH
Q psy4703 2 IDNNMNDYNKLKESGNSA----FKQ---GDYETALDFYTKALKVTAEESHERATCLKNRAAVYLKQNQND--KVIEDCSK 72 (401)
Q Consensus 2 i~~~p~~a~~l~~~Gn~~----~~~---g~y~eAi~~y~~Al~l~~p~~~~~~~~~~n~a~~y~klg~y~--~Ai~~~~k 72 (401)
|..+|++..+|..++..+ ... +++++++.++.++++.+ |. +..+|.+|+.+..+++.++ ++++.+++
T Consensus 96 L~~nPk~y~aW~~R~~iL~~~~~~l~~~~~~~~EL~~~~~~l~~~-pk---ny~aW~~R~~vl~~l~~~~~~~EL~~~~~ 171 (306)
T 3dra_A 96 ALDNEKNYQIWNYRQLIIGQIMELNNNDFDPYREFDILEAMLSSD-PK---NHHVWSYRKWLVDTFDLHNDAKELSFVDK 171 (306)
T ss_dssp HHHCTTCCHHHHHHHHHHHHHHHHTTTCCCTHHHHHHHHHHHHHC-TT---CHHHHHHHHHHHHHTTCTTCHHHHHHHHH
T ss_pred HHHCcccHHHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHhC-CC---CHHHHHHHHHHHHHhcccChHHHHHHHHH
Confidence 567899999999999999 776 89999999999999999 77 9999999999999999999 99999999
Q ss_pred HHHhCCCCHHHHHHHHHHHHHcCC------HHHHHHHHHHHHhhCCCCccHHHHHHHHHHHHHH
Q psy4703 73 SLEIVPDDPKALFRRCQAYEAIGK------FEEAYTDAKHIHRVEPTNKAIQPVLSRLFAIVTK 130 (401)
Q Consensus 73 AL~ldP~~~kA~~~~a~a~~~lg~------~eeA~~~~~kal~l~P~~~~~~~~L~~l~~~~~~ 130 (401)
+|+.||.|..||..|+.++..+++ +++++.++++++.++|+|..++..++.+....+.
T Consensus 172 ~i~~d~~N~sAW~~R~~ll~~l~~~~~~~~~~eEl~~~~~aI~~~p~n~SaW~y~~~ll~~~~~ 235 (306)
T 3dra_A 172 VIDTDLKNNSAWSHRFFLLFSKKHLATDNTIDEELNYVKDKIVKCPQNPSTWNYLLGIHERFDR 235 (306)
T ss_dssp HHHHCTTCHHHHHHHHHHHHSSGGGCCHHHHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHTTC
T ss_pred HHHhCCCCHHHHHHHHHHHHhccccchhhhHHHHHHHHHHHHHhCCCCccHHHHHHHHHHhcCC
Confidence 999999999999999999999998 9999999999999999999999999888877654
No 154
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=99.15 E-value=2.3e-10 Score=100.58 Aligned_cols=130 Identities=8% Similarity=0.008 Sum_probs=105.0
Q ss_pred hHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcC--CCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh---CC---
Q psy4703 7 NDYNKLKESGNSAFKQGDYETALDFYTKALKVTA--EESHERATCLKNRAAVYLKQNQNDKVIEDCSKSLEI---VP--- 78 (401)
Q Consensus 7 ~~a~~l~~~Gn~~~~~g~y~eAi~~y~~Al~l~~--p~~~~~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~l---dP--- 78 (401)
..+..+...|..+...|+|++|+.+|.+++.+.. ++.+....++.++|.+|..+|++++|+..+.+++++ .+
T Consensus 24 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~ 103 (203)
T 3gw4_A 24 TASGARFMLGYVYAFMDRFDEARASFQALQQQAQKSGDHTAEHRALHQVGMVERMAGNWDAARRCFLEERELLASLPEDP 103 (203)
T ss_dssp THHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCH
T ss_pred HHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCccH
Confidence 6788999999999999999999999999999642 122457889999999999999999999999999998 44
Q ss_pred -CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCcc------HHHHHHHHHHHHHHHHHHHH
Q psy4703 79 -DDPKALFRRCQAYEAIGKFEEAYTDAKHIHRVEPTNKA------IQPVLSRLFAIVTKRMQENE 136 (401)
Q Consensus 79 -~~~kA~~~~a~a~~~lg~~eeA~~~~~kal~l~P~~~~------~~~~L~~l~~~~~~~~~a~~ 136 (401)
....+++++|.++..+|++++|+..+++++.+.+.... +...++.++...++..++..
T Consensus 104 ~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~ 168 (203)
T 3gw4_A 104 LAASANAYEVATVALHFGDLAGARQEYEKSLVYAQQADDQVAIACAFRGLGDLAQQEKNLLEAQQ 168 (203)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHCcCHHHHHH
Confidence 33567999999999999999999999999987543221 23556666666666554443
No 155
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=99.15 E-value=2.3e-10 Score=91.06 Aligned_cols=72 Identities=15% Similarity=0.146 Sum_probs=66.8
Q ss_pred chHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCcc
Q psy4703 45 ERATCLKNRAAVYLKQNQNDKVIEDCSKSLEIVPDDPKALFRRCQAYEAIGKFEEAYTDAKHIHRVEPTNKA 116 (401)
Q Consensus 45 ~~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~ldP~~~kA~~~~a~a~~~lg~~eeA~~~~~kal~l~P~~~~ 116 (401)
.++.+++++|.+|+.+|+|++|+..|+++++++|+++.+|+.+|.+|..+|++++|+..|++++++.|.+..
T Consensus 5 ~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~~ 76 (100)
T 3ma5_A 5 EDPFTRYALAQEHLKHDNASRALALFEELVETDPDYVGTYYHLGKLYERLDRTDDAIDTYAQGIEVAREEGT 76 (100)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSC
T ss_pred cCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhhcCCc
Confidence 488999999999999999999999999999999999999999999999999999999999999999875443
No 156
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=99.14 E-value=4.4e-10 Score=101.74 Aligned_cols=135 Identities=16% Similarity=0.088 Sum_probs=115.3
Q ss_pred hhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcCCCCcchHHHHHHHHHHHHHcC----CHHHHHHHHHHHHHhCCCCH
Q psy4703 6 MNDYNKLKESGNSAFKQGDYETALDFYTKALKVTAEESHERATCLKNRAAVYLKQN----QNDKVIEDCSKSLEIVPDDP 81 (401)
Q Consensus 6 p~~a~~l~~~Gn~~~~~g~y~eAi~~y~~Al~l~~p~~~~~~~~~~n~a~~y~klg----~y~~Ai~~~~kAL~ldP~~~ 81 (401)
..++.++...|..++..+++++|+.+|+++++.. ++.+++++|.+|.. + ++++|+.+|+++++ +.++
T Consensus 15 ~g~~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~g------~~~a~~~lg~~y~~-~g~~~~~~~A~~~~~~A~~--~g~~ 85 (212)
T 3rjv_A 15 AGDRRAQYYLADTWVSSGDYQKAEYWAQKAAAQG------DGDALALLAQLKIR-NPQQADYPQARQLAEKAVE--AGSK 85 (212)
T ss_dssp TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTT------CHHHHHHHHHHTTS-STTSCCHHHHHHHHHHHHH--TTCH
T ss_pred CCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcC------CHHHHHHHHHHHHc-CCCCCCHHHHHHHHHHHHH--CCCH
Confidence 3578899999999999999999999999999887 78999999999998 7 99999999999965 6799
Q ss_pred HHHHHHHHHHHH----cCCHHHHHHHHHHHHhhCCC--CccHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHhhc
Q psy4703 82 KALFRRCQAYEA----IGKFEEAYTDAKHIHRVEPT--NKAIQPVLSRLFAI----VTKRMQENEQLQNKVHNMFKYVFD 151 (401)
Q Consensus 82 kA~~~~a~a~~~----lg~~eeA~~~~~kal~l~P~--~~~~~~~L~~l~~~----~~~~~~a~~~~~~~~~~~~~~~~~ 151 (401)
.+++++|.+|.. .+++++|+.+|+++++..|. ++.+...|+.++.. .++. .++..+|+++..
T Consensus 86 ~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~~~~~~~a~~~Lg~~y~~g~g~~~d~--------~~A~~~~~~A~~ 157 (212)
T 3rjv_A 86 SGEIVLARVLVNRQAGATDVAHAITLLQDAARDSESDAAVDAQMLLGLIYASGVHGPEDD--------VKASEYFKGSSS 157 (212)
T ss_dssp HHHHHHHHHHTCGGGSSCCHHHHHHHHHHHTSSTTSHHHHHHHHHHHHHHHHTSSSSCCH--------HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCccCHHHHHHHHHHHHHcCCCcchHHHHHHHHHHHHcCCCCCCCH--------HHHHHHHHHHHH
Confidence 999999999998 99999999999999999883 48889999988876 3333 334557888877
Q ss_pred CCCChh
Q psy4703 152 TSAPMD 157 (401)
Q Consensus 152 ~~~~~~ 157 (401)
.+.+..
T Consensus 158 ~~~~~~ 163 (212)
T 3rjv_A 158 LSRTGY 163 (212)
T ss_dssp TSCTTH
T ss_pred cCCCHH
Confidence 544433
No 157
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=99.14 E-value=1.5e-10 Score=110.75 Aligned_cols=107 Identities=11% Similarity=0.106 Sum_probs=89.4
Q ss_pred hHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcCCC---CcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC---
Q psy4703 7 NDYNKLKESGNSAFKQGDYETALDFYTKALKVTAEE---SHERATCLKNRAAVYLKQNQNDKVIEDCSKSLEIVPDD--- 80 (401)
Q Consensus 7 ~~a~~l~~~Gn~~~~~g~y~eAi~~y~~Al~l~~p~---~~~~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~ldP~~--- 80 (401)
..+..+.+.|+.+...|+|++|+.+|++|+++. +. ....+.++.++|.+|.. |+|++|+.+|++++++.|..
T Consensus 74 ~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~-~~~g~~~~~a~~~~~lg~~~~~-g~~~~A~~~~~~Al~~~~~~~~~ 151 (307)
T 2ifu_A 74 HAAKAFEQAGMMLKDLQRMPEAVQYIEKASVMY-VENGTPDTAAMALDRAGKLMEP-LDLSKAVHLYQQAAAVFENEERL 151 (307)
T ss_dssp HHHHHHHHHHHHHHHTTCGGGGHHHHHHHHHHH-HTTTCHHHHHHHHHHHHHHHTT-TCHHHHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHH-HHcCCHHHHHHHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHhCCCh
Confidence 346678888999999999999999999999886 32 12246788899999988 99999999999999987643
Q ss_pred ---HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCc
Q psy4703 81 ---PKALFRRCQAYEAIGKFEEAYTDAKHIHRVEPTNK 115 (401)
Q Consensus 81 ---~kA~~~~a~a~~~lg~~eeA~~~~~kal~l~P~~~ 115 (401)
..++.++|.+|..+|+|++|+..|++++++.|.+.
T Consensus 152 ~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~ 189 (307)
T 2ifu_A 152 RQAAELIGKASRLLVRQQKFDEAAASLQKEKSMYKEME 189 (307)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT
T ss_pred hHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcC
Confidence 57889999999999999999999999999877654
No 158
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=99.13 E-value=1.2e-09 Score=103.40 Aligned_cols=124 Identities=15% Similarity=0.076 Sum_probs=102.0
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhhcCCC---CcchHHHHHHHHHHHHHcCCHHHHHHHHHHHH---HhCCCCH--
Q psy4703 10 NKLKESGNSAFKQGDYETALDFYTKALKVTAEE---SHERATCLKNRAAVYLKQNQNDKVIEDCSKSL---EIVPDDP-- 81 (401)
Q Consensus 10 ~~l~~~Gn~~~~~g~y~eAi~~y~~Al~l~~p~---~~~~~~~~~n~a~~y~klg~y~~Ai~~~~kAL---~ldP~~~-- 81 (401)
..+...|..+...|+|++|+.+|.+++.+. +. ......++.++|.+|..+|+|++|+.+|++++ +..|++.
T Consensus 116 ~~~~~~~~~~~~~~~~~~A~~~~~~al~~~-~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~~~~~~~~ 194 (293)
T 2qfc_A 116 QWQYYVAAYVLKKVDYEYCILELKKLLNQQ-LTGIDVYQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEF 194 (293)
T ss_dssp HHHHHHHHHHHTSSCHHHHHHHHHHHHTTC-CCSSCTTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHH
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHHHH-hcCCchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCccccc
Confidence 445678888999999999999999999876 32 12236799999999999999999999999999 5566643
Q ss_pred --HHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC------ccHHHHHHHHHHHHHHHHHH
Q psy4703 82 --KALFRRCQAYEAIGKFEEAYTDAKHIHRVEPTN------KAIQPVLSRLFAIVTKRMQE 134 (401)
Q Consensus 82 --kA~~~~a~a~~~lg~~eeA~~~~~kal~l~P~~------~~~~~~L~~l~~~~~~~~~a 134 (401)
.+++++|.+|..+|+|++|+..|++++++.++. ..+...++.++..+++..++
T Consensus 195 ~~~~~~nlg~~y~~~~~y~~Al~~~~kal~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A 255 (293)
T 2qfc_A 195 DVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRINSMALIGQLYYQRGECLRKLEYEEAE 255 (293)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTBCSSHHHHHHHHHHHHHHTTCCHHH
T ss_pred hHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHcCCcHHH
Confidence 699999999999999999999999999886531 45566777777777766555
No 159
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.13 E-value=1.9e-10 Score=120.33 Aligned_cols=124 Identities=9% Similarity=0.071 Sum_probs=116.1
Q ss_pred ccCChhHHHHHHHHHHHHHHcC--CHHHHHHHHHHHHhhcCCCCcchHHHHHHHHHHHHHcC-CHHHHHHHHHHHHHhCC
Q psy4703 2 IDNNMNDYNKLKESGNSAFKQG--DYETALDFYTKALKVTAEESHERATCLKNRAAVYLKQN-QNDKVIEDCSKSLEIVP 78 (401)
Q Consensus 2 i~~~p~~a~~l~~~Gn~~~~~g--~y~eAi~~y~~Al~l~~p~~~~~~~~~~n~a~~y~klg-~y~~Ai~~~~kAL~ldP 78 (401)
|+.+|++..+|..+|..+.+.| +|++|+.+|.++++++ |. +..+|.+|+.+..++| .+++++++++++|+.+|
T Consensus 100 l~~~pK~y~aW~hR~w~l~~l~~~~~~~el~~~~k~l~~d-~~---N~~aW~~R~~~l~~l~~~~~~el~~~~~~I~~~p 175 (567)
T 1dce_A 100 LRVNPKSYGTWHHRCWLLSRLPEPNWARELELCARFLEAD-ER---NFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNF 175 (567)
T ss_dssp HHHCTTCHHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHHC-TT---CHHHHHHHHHHHHHTCCCHHHHHHHHHTTTTTTC
T ss_pred HHhCCCCHHHHHHHHHHHHHcccccHHHHHHHHHHHHhhc-cc---cccHHHHHHHHHHHcCCChHHHHHHHHHHHHHCC
Confidence 5679999999999999999999 7799999999999999 77 9999999999999999 99999999999999999
Q ss_pred CCHHHHHHHHHHHHHc--------------CCHHHHHHHHHHHHhhCCCCccHHHHHHHHHHHHH
Q psy4703 79 DDPKALFRRCQAYEAI--------------GKFEEAYTDAKHIHRVEPTNKAIQPVLSRLFAIVT 129 (401)
Q Consensus 79 ~~~kA~~~~a~a~~~l--------------g~~eeA~~~~~kal~l~P~~~~~~~~L~~l~~~~~ 129 (401)
.+..||+.|+.++..+ +.+++|++++.+|+.++|+|..++..++-+....+
T Consensus 176 ~n~saW~~r~~ll~~l~~~~~~~~~~~~~~~~~~eel~~~~~ai~~~P~~~saW~y~~~ll~~~~ 240 (567)
T 1dce_A 176 SNYSSWHYRSCLLPQLHPQPDSGPQGRLPENVLLKELELVQNAFFTDPNDQSAWFYHRWLLGRAE 240 (567)
T ss_dssp CCHHHHHHHHHHHHHHSCCCCSSSCCSSCHHHHHHHHHHHHHHHHHCSSCSHHHHHHHHHHSCCC
T ss_pred CCccHHHHHHHHHHhhcccccccccccccHHHHHHHHHHHHHHHhhCCCCccHHHHHHHHHhcCC
Confidence 9999999999999986 66899999999999999999999999887766543
No 160
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.13 E-value=7.5e-10 Score=91.93 Aligned_cols=101 Identities=9% Similarity=0.030 Sum_probs=91.6
Q ss_pred cchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC---HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCccHHHH
Q psy4703 44 HERATCLKNRAAVYLKQNQNDKVIEDCSKSLEIVPDD---PKALFRRCQAYEAIGKFEEAYTDAKHIHRVEPTNKAIQPV 120 (401)
Q Consensus 44 ~~~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~ldP~~---~kA~~~~a~a~~~lg~~eeA~~~~~kal~l~P~~~~~~~~ 120 (401)
+.....++.+|.+++..|+|++|+..|+++++++|++ ..+++.+|.+|..+|+|++|+..|+++++++|++..++..
T Consensus 25 ~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~ 104 (148)
T 2dba_A 25 ASSVEQLRKEGNELFKCGDYGGALAAYTQALGLDATPQDQAVLHRNRAACHLKLEDYDKAETEASKAIEKDGGDVKALYR 104 (148)
T ss_dssp CCCHHHHHHHHHHHHTTTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSCCHHHHHH
T ss_pred hHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCccCHHHHHH
Confidence 4588999999999999999999999999999999988 8999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q psy4703 121 LSRLFAIVTKRMQENEQLQNKVHNMFKYVFDT 152 (401)
Q Consensus 121 L~~l~~~~~~~~~a~~~~~~~~~~~~~~~~~~ 152 (401)
++.++...++..++.. +|+.++..
T Consensus 105 ~a~~~~~~~~~~~A~~--------~~~~al~~ 128 (148)
T 2dba_A 105 RSQALEKLGRLDQAVL--------DLQRCVSL 128 (148)
T ss_dssp HHHHHHHHTCHHHHHH--------HHHHHHHH
T ss_pred HHHHHHHcCCHHHHHH--------HHHHHHHc
Confidence 9999988887755444 67777663
No 161
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=99.13 E-value=5.1e-10 Score=109.57 Aligned_cols=131 Identities=12% Similarity=0.078 Sum_probs=101.2
Q ss_pred ChhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcCCCC----cchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC--
Q psy4703 5 NMNDYNKLKESGNSAFKQGDYETALDFYTKALKVTAEES----HERATCLKNRAAVYLKQNQNDKVIEDCSKSLEIVP-- 78 (401)
Q Consensus 5 ~p~~a~~l~~~Gn~~~~~g~y~eAi~~y~~Al~l~~p~~----~~~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~ldP-- 78 (401)
.+..+..+...|..++..|+++.|+.+|.+|+++. +.. +..+.++.++|.+|..+|+|++|+..|.+++++.+
T Consensus 137 ~~~~a~~~~~lg~~y~~~~~~~~A~~~~~~al~~~-~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~ 215 (378)
T 3q15_A 137 DIEKAEFHFKVAEAYYHMKQTHVSMYHILQALDIY-QNHPLYSIRTIQSLFVIAGNYDDFKHYDKALPHLEAALELAMDI 215 (378)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH-HTSTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHH-HhCCCchhhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHc
Confidence 45567788888888888888888888888888876 421 23567788888888888888888888888888643
Q ss_pred ----CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHh-----hCCCCccHHHHHHHHHHHHHHHHHHHH
Q psy4703 79 ----DDPKALFRRCQAYEAIGKFEEAYTDAKHIHR-----VEPTNKAIQPVLSRLFAIVTKRMQENE 136 (401)
Q Consensus 79 ----~~~kA~~~~a~a~~~lg~~eeA~~~~~kal~-----l~P~~~~~~~~L~~l~~~~~~~~~a~~ 136 (401)
....+++++|.+|..+|++++|+..|+++++ .+|....+...++.++...++..++..
T Consensus 216 ~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~ 282 (378)
T 3q15_A 216 QNDRFIAISLLNIANSYDRSGDDQMAVEHFQKAAKVSREKVPDLLPKVLFGLSWTLCKAGQTQKAFQ 282 (378)
T ss_dssp TCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhCChhHHHHHHHHHHHHHHCCCHHHHHH
Confidence 1245788888888888888888888888888 666666777778888877777654444
No 162
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=99.13 E-value=7e-10 Score=89.60 Aligned_cols=104 Identities=13% Similarity=0.126 Sum_probs=88.6
Q ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC-------ccHH
Q psy4703 46 RATCLKNRAAVYLKQNQNDKVIEDCSKSLEIVPDDPKALFRRCQAYEAIGKFEEAYTDAKHIHRVEPTN-------KAIQ 118 (401)
Q Consensus 46 ~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~ldP~~~kA~~~~a~a~~~lg~~eeA~~~~~kal~l~P~~-------~~~~ 118 (401)
.+..++.+|.+++..|+|++|+..+++++..+|.++.+++.+|.++..+|++++|+..|++++.++|++ ..+.
T Consensus 3 ~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (131)
T 1elr_A 3 QALKEKELGNDAYKKKDFDTALKHYDKAKELDPTNMTYITNQAAVYFEKGDYNKCRELCEKAIEVGRENREDYRQIAKAY 82 (131)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHhccHHHHHHHHHHHHhhccccchhHHHHHHHH
Confidence 677899999999999999999999999999999999999999999999999999999999999999877 6677
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCChh
Q psy4703 119 PVLSRLFAIVTKRMQENEQLQNKVHNMFKYVFDTSAPMD 157 (401)
Q Consensus 119 ~~L~~l~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~ 157 (401)
..++.++...++...+ ..+|+.+....++..
T Consensus 83 ~~la~~~~~~~~~~~A--------~~~~~~~~~~~~~~~ 113 (131)
T 1elr_A 83 ARIGNSYFKEEKYKDA--------IHFYNKSLAEHRTPD 113 (131)
T ss_dssp HHHHHHHHHTTCHHHH--------HHHHHHHHHHCCCHH
T ss_pred HHHHHHHHHhccHHHH--------HHHHHHHHHhCCCHH
Confidence 7777777777666444 346777766433433
No 163
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=99.12 E-value=2.2e-09 Score=85.67 Aligned_cols=104 Identities=20% Similarity=0.288 Sum_probs=90.9
Q ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCccHHHHHHHHH
Q psy4703 46 RATCLKNRAAVYLKQNQNDKVIEDCSKSLEIVPDDPKALFRRCQAYEAIGKFEEAYTDAKHIHRVEPTNKAIQPVLSRLF 125 (401)
Q Consensus 46 ~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~ldP~~~kA~~~~a~a~~~lg~~eeA~~~~~kal~l~P~~~~~~~~L~~l~ 125 (401)
....++++|.++...|++++|+..+++++..+|.++.+++.+|.++...|++++|+..|+++++++|.+..++..++.++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~ 87 (125)
T 1na0_A 8 SAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAY 87 (125)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCcHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCccHHHHHHHHHHH
Confidence 47889999999999999999999999999999999999999999999999999999999999999999999999999888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhc-CCCChh
Q psy4703 126 AIVTKRMQENEQLQNKVHNMFKYVFD-TSAPMD 157 (401)
Q Consensus 126 ~~~~~~~~a~~~~~~~~~~~~~~~~~-~~~~~~ 157 (401)
...++..++. .+|+.+.. .|.+..
T Consensus 88 ~~~~~~~~A~--------~~~~~~~~~~~~~~~ 112 (125)
T 1na0_A 88 YKQGDYDEAI--------EYYQKALELDPNNAE 112 (125)
T ss_dssp HHTTCHHHHH--------HHHHHHHHHCTTCHH
T ss_pred HHhcCHHHHH--------HHHHHHHHhCCCcHH
Confidence 8877765443 36666666 344333
No 164
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=99.12 E-value=4.4e-10 Score=106.32 Aligned_cols=125 Identities=13% Similarity=0.040 Sum_probs=98.1
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhhcCCCCc---chHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-------CCCC
Q psy4703 11 KLKESGNSAFKQGDYETALDFYTKALKVTAEESH---ERATCLKNRAAVYLKQNQNDKVIEDCSKSLEI-------VPDD 80 (401)
Q Consensus 11 ~l~~~Gn~~~~~g~y~eAi~~y~~Al~l~~p~~~---~~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~l-------dP~~ 80 (401)
.+...|..+...|+|++|+.+|.+++.+. +... ....++.++|.+|..+|+|++|+.+|+++++. .+..
T Consensus 117 ~~~~l~~~~~~~~~~~~Ai~~~~~al~~~-~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~~ 195 (293)
T 3u3w_A 117 WQYYVAAYVLKKVDYEYCILELKKLLNQQ-LTGIDVYQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFD 195 (293)
T ss_dssp HHHHHHHHHTTSSCHHHHHHHHHHHHHTC-CCCSCTTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSSCCHHHH
T ss_pred HHHHHHHHHHcccCHHHHHHHHHHHHHHh-cccccHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcccchhHH
Confidence 34458888888999999999999999976 3211 23567999999999999999999999999953 2334
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC------ccHHHHHHHHHHHHHH-HHHHHH
Q psy4703 81 PKALFRRCQAYEAIGKFEEAYTDAKHIHRVEPTN------KAIQPVLSRLFAIVTK-RMQENE 136 (401)
Q Consensus 81 ~kA~~~~a~a~~~lg~~eeA~~~~~kal~l~P~~------~~~~~~L~~l~~~~~~-~~~a~~ 136 (401)
+.+++++|.+|..+|+|++|+..+++++++.+.. ..+...++.++..+++ ..++..
T Consensus 196 ~~~~~nlg~~y~~~~~y~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~~A~~ 258 (293)
T 3u3w_A 196 VKVRYNHAKALYLDSRYEESLYQVNKAIEISCRINSMALIGQLYYQRGECLRKLEYEEAEIED 258 (293)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTBCTTHHHHHHHHHHHHHHTTCCHHHHHH
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhCCcHHHHHH
Confidence 5689999999999999999999999999987644 4567777777777763 344433
No 165
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=99.12 E-value=3.2e-11 Score=123.34 Aligned_cols=111 Identities=16% Similarity=0.166 Sum_probs=99.2
Q ss_pred ccCChhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcCCCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH
Q psy4703 2 IDNNMNDYNKLKESGNSAFKQGDYETALDFYTKALKVTAEESHERATCLKNRAAVYLKQNQNDKVIEDCSKSLEIVPDDP 81 (401)
Q Consensus 2 i~~~p~~a~~l~~~Gn~~~~~g~y~eAi~~y~~Al~l~~p~~~~~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~ldP~~~ 81 (401)
++.+|+.+..+...|..++..|+|++|+.+|+++++++ |+ ++.+++++|.+|..+|+|++|+.+|+++++++|++.
T Consensus 33 l~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~-p~---~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~p~~~ 108 (477)
T 1wao_1 33 IELNPSNAIYYGNRSLAYLRTECYGYALGDATRAIELD-KK---YIKGYYRRAASNMALGKFRAALRDYETVVKVKPHDK 108 (477)
T ss_dssp HHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSC-TT---CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCT
T ss_pred HHhCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhC-CC---CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH
Confidence 45688999999999999999999999999999999999 76 899999999999999999999999999999999999
Q ss_pred HHHHHHHHH--HHHcCCHHHHHHHHH-----------HHHhhCCCCcc
Q psy4703 82 KALFRRCQA--YEAIGKFEEAYTDAK-----------HIHRVEPTNKA 116 (401)
Q Consensus 82 kA~~~~a~a--~~~lg~~eeA~~~~~-----------kal~l~P~~~~ 116 (401)
.++..++.+ +...|+|++|+..++ ++++++|+...
T Consensus 109 ~~~~~l~~~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~al~~~~~~~~ 156 (477)
T 1wao_1 109 DAKMKYQECNKIVKQKAFERAIAGDEHKRSVVDSLDIESMTIEDEYSG 156 (477)
T ss_dssp THHHHHHHHHHHHHHHHHCCC------CCSTTTCCTTSSCCCCTTCCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccccccchhHhhhhhhhccccccccc
Confidence 999999999 899999999999999 88888887543
No 166
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=99.12 E-value=5.5e-11 Score=103.68 Aligned_cols=76 Identities=14% Similarity=0.226 Sum_probs=70.8
Q ss_pred ccCChhHHHHHHHHHHHHHHcCCH----------HHHHHHHHHHHhhcCCCCcchHHHHHHHHHHHHHcC----------
Q psy4703 2 IDNNMNDYNKLKESGNSAFKQGDY----------ETALDFYTKALKVTAEESHERATCLKNRAAVYLKQN---------- 61 (401)
Q Consensus 2 i~~~p~~a~~l~~~Gn~~~~~g~y----------~eAi~~y~~Al~l~~p~~~~~~~~~~n~a~~y~klg---------- 61 (401)
++.+|++++.|.+.|..+...|++ ++|+..|++||+++ |+ ...+|+++|.+|..+|
T Consensus 29 i~l~P~~aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~ld-P~---~~~A~~~LG~ay~~lg~l~P~~~~a~ 104 (158)
T 1zu2_A 29 YKSNPLDADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLID-PK---KDEAVWCIGNAYTSFAFLTPDETEAK 104 (158)
T ss_dssp HHHCTTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHC-TT---CHHHHHHHHHHHHHHHHHCCCHHHHH
T ss_pred HHHCCCCHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHhC-cC---cHHHHHHHHHHHHHhcccCcchhhhh
Confidence 568999999999999999998875 59999999999999 77 9999999999999885
Q ss_pred -CHHHHHHHHHHHHHhCCCCH
Q psy4703 62 -QNDKVIEDCSKSLEIVPDDP 81 (401)
Q Consensus 62 -~y~~Ai~~~~kAL~ldP~~~ 81 (401)
+|++|+.+|++|++++|++.
T Consensus 105 g~~~eA~~~~~kAl~l~P~~~ 125 (158)
T 1zu2_A 105 HNFDLATQFFQQAVDEQPDNT 125 (158)
T ss_dssp HHHHHHHHHHHHHHHHCTTCH
T ss_pred ccHHHHHHHHHHHHHhCCCCH
Confidence 89999999999999999975
No 167
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=99.10 E-value=2.6e-10 Score=111.58 Aligned_cols=132 Identities=14% Similarity=0.185 Sum_probs=97.2
Q ss_pred ChhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcC--CCCcchHHHHHHHHHHHHHcCC-----------------HHH
Q psy4703 5 NMNDYNKLKESGNSAFKQGDYETALDFYTKALKVTA--EESHERATCLKNRAAVYLKQNQ-----------------NDK 65 (401)
Q Consensus 5 ~p~~a~~l~~~Gn~~~~~g~y~eAi~~y~~Al~l~~--p~~~~~~~~~~n~a~~y~klg~-----------------y~~ 65 (401)
+|..+..+...|..++..|+|++|+.+|.+++++.+ ++.+....++.++|.+|..+|+ |++
T Consensus 122 ~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~a~~~~~~ 201 (411)
T 4a1s_A 122 RLGEAKSSGNLGNTLKVMGRFDEAAICCERHLTLARQLGDRLSEGRALYNLGNVYHAKGKHLGQRNPGKFGDDVKEALTR 201 (411)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCCHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHcCcccccccchhhhhhhhHHHHH
Confidence 466677788888888888888888888888887741 1123467788888888888888 888
Q ss_pred HHHHHHHHHHhC------CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCcc------HHHHHHHHHHHHHHHHH
Q psy4703 66 VIEDCSKSLEIV------PDDPKALFRRCQAYEAIGKFEEAYTDAKHIHRVEPTNKA------IQPVLSRLFAIVTKRMQ 133 (401)
Q Consensus 66 Ai~~~~kAL~ld------P~~~kA~~~~a~a~~~lg~~eeA~~~~~kal~l~P~~~~------~~~~L~~l~~~~~~~~~ 133 (401)
|+..+.+++++. +....+++.+|.+|..+|++++|+..|++++++.|.... +...++.++...++..+
T Consensus 202 A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~ 281 (411)
T 4a1s_A 202 AVEFYQENLKLMRDLGDRGAQGRACGNLGNTYYLLGDFQAAIEHHQERLRIAREFGDRAAERRANSNLGNSHIFLGQFED 281 (411)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHTTTCHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHCcCHHH
Confidence 888888887763 334567888888888888888888888888888775544 66667777766666655
Q ss_pred HHH
Q psy4703 134 ENE 136 (401)
Q Consensus 134 a~~ 136 (401)
+..
T Consensus 282 A~~ 284 (411)
T 4a1s_A 282 AAE 284 (411)
T ss_dssp HHH
T ss_pred HHH
Confidence 444
No 168
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=99.09 E-value=5.1e-10 Score=106.98 Aligned_cols=125 Identities=13% Similarity=0.069 Sum_probs=102.8
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhhcCCC---CcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC--C----
Q psy4703 10 NKLKESGNSAFKQGDYETALDFYTKALKVTAEE---SHERATCLKNRAAVYLKQNQNDKVIEDCSKSLEIVPD--D---- 80 (401)
Q Consensus 10 ~~l~~~Gn~~~~~g~y~eAi~~y~~Al~l~~p~---~~~~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~ldP~--~---- 80 (401)
..+...|+.+...|+|++|+.+|.+++++. +. ......+|.++|.+|..+|+|++|+.+|++++++.+. +
T Consensus 37 ~~~~~a~~~~~~~g~~~~A~~~~~~al~~~-~~~~~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~~~~~ 115 (307)
T 2ifu_A 37 SEYAKAAVAFKNAKQLEQAKDAYLQEAEAH-ANNRSLFHAAKAFEQAGMMLKDLQRMPEAVQYIEKASVMYVENGTPDTA 115 (307)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHH-HHTTCHHHHHHHHHHHHHHHHHTTCGGGGHHHHHHHHHHHHTTTCHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHH-HHcCCHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCHHHH
Confidence 344555788999999999999999999997 42 1234678999999999999999999999999998532 2
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC------ccHHHHHHHHHHHHHHHHHHHH
Q psy4703 81 PKALFRRCQAYEAIGKFEEAYTDAKHIHRVEPTN------KAIQPVLSRLFAIVTKRMQENE 136 (401)
Q Consensus 81 ~kA~~~~a~a~~~lg~~eeA~~~~~kal~l~P~~------~~~~~~L~~l~~~~~~~~~a~~ 136 (401)
..++.++|.+|.. |++++|+.+|++++++.|.. ..++..++.++..+++..++..
T Consensus 116 a~~~~~lg~~~~~-g~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~ 176 (307)
T 2ifu_A 116 AMALDRAGKLMEP-LDLSKAVHLYQQAAAVFENEERLRQAAELIGKASRLLVRQQKFDEAAA 176 (307)
T ss_dssp HHHHHHHHHHHTT-TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHcCCHHHHHH
Confidence 5689999999999 99999999999999998754 3456677777777777765554
No 169
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=99.09 E-value=2.5e-09 Score=99.88 Aligned_cols=104 Identities=15% Similarity=0.215 Sum_probs=49.7
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcCCC---CcchHHHHHHHHHHHHHcCC--------------------HH
Q psy4703 8 DYNKLKESGNSAFKQGDYETALDFYTKALKVTAEE---SHERATCLKNRAAVYLKQNQ--------------------ND 64 (401)
Q Consensus 8 ~a~~l~~~Gn~~~~~g~y~eAi~~y~~Al~l~~p~---~~~~~~~~~n~a~~y~klg~--------------------y~ 64 (401)
.+..+...|..++..|+|++|+.+|.+++++. |. .+....++.++|.+|..+|+ ++
T Consensus 82 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~ 160 (338)
T 3ro2_A 82 EAKASGNLGNTLKVLGNFDEAIVCCQRHLDIS-RELNDKVGEARALYNLGNVYHAKGKSFGCPGPQDTGEFPEDVRNALQ 160 (338)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH-HHTTCHHHHHHHHHHHHHHHHHHHHTSSSSSCC----CCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHccCHHHHHHHHHHHHHHH-HHhcCchHHHHHHHHHHHHHHHcCcccccchhhhhhhhhhhHHHHHH
Confidence 34444455555555555555555555555443 21 11223345555555555555 55
Q ss_pred HHHHHHHHHHHh------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCC
Q psy4703 65 KVIEDCSKSLEI------VPDDPKALFRRCQAYEAIGKFEEAYTDAKHIHRVEP 112 (401)
Q Consensus 65 ~Ai~~~~kAL~l------dP~~~kA~~~~a~a~~~lg~~eeA~~~~~kal~l~P 112 (401)
+|+..+++++.+ .|....++..+|.++..+|++++|+..+++++++.|
T Consensus 161 ~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~ 214 (338)
T 3ro2_A 161 AAVDLYEENLSLVTALGDRAAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAK 214 (338)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 555555555444 122233455555555555555555555555554443
No 170
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=99.09 E-value=3.9e-10 Score=91.82 Aligned_cols=83 Identities=13% Similarity=0.040 Sum_probs=75.8
Q ss_pred ChhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcCCCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHH
Q psy4703 5 NMNDYNKLKESGNSAFKQGDYETALDFYTKALKVTAEESHERATCLKNRAAVYLKQNQNDKVIEDCSKSLEIVPDDPKAL 84 (401)
Q Consensus 5 ~p~~a~~l~~~Gn~~~~~g~y~eAi~~y~~Al~l~~p~~~~~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~ldP~~~kA~ 84 (401)
+|..+..+...|..++..|+|++|+.+|+++++++ |+ +..+++++|.+|..+|++++|+..+.++++.+|+++...
T Consensus 23 ~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~-p~---~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~ 98 (117)
T 3k9i_A 23 GKDLAECYLGLGSTFRTLGEYRKAEAVLANGVKQF-PN---HQALRVFYAMVLYNLGRYEQGVELLLKIIAETSDDETIQ 98 (117)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TT---CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCCCHHHH
T ss_pred CccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-CC---chHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHH
Confidence 69999999999999999999999999999999999 77 799999999999999999999999999999999998765
Q ss_pred HHHHHHH
Q psy4703 85 FRRCQAY 91 (401)
Q Consensus 85 ~~~a~a~ 91 (401)
.....+.
T Consensus 99 ~~~~ai~ 105 (117)
T 3k9i_A 99 SYKQAIL 105 (117)
T ss_dssp HTHHHHH
T ss_pred HHHHHHH
Confidence 4443333
No 171
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=99.07 E-value=8.8e-10 Score=108.20 Aligned_cols=122 Identities=12% Similarity=-0.009 Sum_probs=69.0
Q ss_pred ccCChhHHHHHHHHHHHHHHcC-CHHHHHHHHHHHHhhcCCCCcchHHHHHHHHHHHHHc-C-CHHHHHHHHHHHHHhCC
Q psy4703 2 IDNNMNDYNKLKESGNSAFKQG-DYETALDFYTKALKVTAEESHERATCLKNRAAVYLKQ-N-QNDKVIEDCSKSLEIVP 78 (401)
Q Consensus 2 i~~~p~~a~~l~~~Gn~~~~~g-~y~eAi~~y~~Al~l~~p~~~~~~~~~~n~a~~y~kl-g-~y~~Ai~~~~kAL~ldP 78 (401)
|..+|++..++..+|..+...| .+++++.++++++..+ |. +..+|..|+.++..+ + ++++++..|+++|+.+|
T Consensus 81 L~~nP~~ytaWn~R~~iL~~l~~~l~eEL~~~~~~L~~n-PK---ny~aW~hR~wlL~~l~~~~~~~EL~~~~k~L~~dp 156 (349)
T 3q7a_A 81 VRMNPAHYTVWQYRFSLLTSLNKSLEDELRLMNEFAVQN-LK---SYQVWHHRLLLLDRISPQDPVSEIEYIHGSLLPDP 156 (349)
T ss_dssp HHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTT-CC---CHHHHHHHHHHHHHHCCSCCHHHHHHHHHHTSSCT
T ss_pred HHhCchhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhC-CC---cHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhCC
Confidence 3445555555555555555555 3555555555555555 44 555555555555555 4 55555555555555555
Q ss_pred CCHHHHHHHHHHHHHcCCHH--------HHHHHHHHHHhhCCCCccHHHHHHHHHHH
Q psy4703 79 DDPKALFRRCQAYEAIGKFE--------EAYTDAKHIHRVEPTNKAIQPVLSRLFAI 127 (401)
Q Consensus 79 ~~~kA~~~~a~a~~~lg~~e--------eA~~~~~kal~l~P~~~~~~~~L~~l~~~ 127 (401)
.+..+|..|+.++..+|.++ +++..+.++++.+|.|-.++...+.+...
T Consensus 157 kNy~AW~~R~wvl~~l~~~~~~~~~~~~eELe~~~k~I~~dp~N~SAW~~R~~lL~~ 213 (349)
T 3q7a_A 157 KNYHTWAYLHWLYSHFSTLGRISEAQWGSELDWCNEMLRVDGRNNSAWGWRWYLRVS 213 (349)
T ss_dssp TCHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHHHHhccccccchhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHh
Confidence 55555555555555555555 55555555555555555555555544443
No 172
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=99.06 E-value=4.2e-09 Score=108.17 Aligned_cols=113 Identities=11% Similarity=0.055 Sum_probs=96.7
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcC----CCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-----CCC
Q psy4703 9 YNKLKESGNSAFKQGDYETALDFYTKALKVTA----EESHERATCLKNRAAVYLKQNQNDKVIEDCSKSLEI-----VPD 79 (401)
Q Consensus 9 a~~l~~~Gn~~~~~g~y~eAi~~y~~Al~l~~----p~~~~~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~l-----dP~ 79 (401)
+....+.+..+..+|+|++|+..|.+++++.. |++|..+..+.|+|.+|..+|+|++|+..|+++|++ .|+
T Consensus 309 a~~~le~a~~~~~qg~~~eA~~l~~~aL~~~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~ 388 (490)
T 3n71_A 309 SKDTLEKIDKARSEGLYHEVVKLCRECLEKQEPVFADTNLYVLRLLSIASEVLSYLQAYEEASHYARRMVDGYMKLYHHN 388 (490)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCTT
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHcCCC
Confidence 34455667778899999999999999998753 667889999999999999999999999999999987 355
Q ss_pred C---HHHHHHHHHHHHHcCCHHHHHHHHHHHHhh-----CCCCccHHHHH
Q psy4703 80 D---PKALFRRCQAYEAIGKFEEAYTDAKHIHRV-----EPTNKAIQPVL 121 (401)
Q Consensus 80 ~---~kA~~~~a~a~~~lg~~eeA~~~~~kal~l-----~P~~~~~~~~L 121 (401)
+ ...+.++|.+|..+|+|++|...|++|+++ -|+++.+...+
T Consensus 389 Hp~~a~~l~nLa~~~~~~G~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~~~ 438 (490)
T 3n71_A 389 NAQLGMAVMRAGLTNWHAGHIEVGHGMICKAYAILLVTHGPSHPITKDLE 438 (490)
T ss_dssp CHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTSHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCCChHHHHHH
Confidence 5 557999999999999999999999999975 67777666544
No 173
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=99.05 E-value=3.8e-09 Score=99.95 Aligned_cols=91 Identities=11% Similarity=0.056 Sum_probs=86.8
Q ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCccHHHHHHHHH
Q psy4703 46 RATCLKNRAAVYLKQNQNDKVIEDCSKSLEIVPDDPKALFRRCQAYEAIGKFEEAYTDAKHIHRVEPTNKAIQPVLSRLF 125 (401)
Q Consensus 46 ~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~ldP~~~kA~~~~a~a~~~lg~~eeA~~~~~kal~l~P~~~~~~~~L~~l~ 125 (401)
.+..++++|.+++..|+|++|+..|+++++++|+++.+++++|.+|..+|+|++|+.+|+++++++|++..++..++.++
T Consensus 3 ~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~ 82 (281)
T 2c2l_A 3 SAQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLGQCQ 82 (281)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSCTTCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 67899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHH
Q psy4703 126 AIVTKRMQENE 136 (401)
Q Consensus 126 ~~~~~~~~a~~ 136 (401)
..+++..++..
T Consensus 83 ~~~g~~~~A~~ 93 (281)
T 2c2l_A 83 LEMESYDEAIA 93 (281)
T ss_dssp HHTTCHHHHHH
T ss_pred HHcCCHHHHHH
Confidence 99988866655
No 174
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=99.04 E-value=1.9e-09 Score=84.29 Aligned_cols=69 Identities=16% Similarity=0.293 Sum_probs=66.2
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH-HHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCccHH
Q psy4703 50 LKNRAAVYLKQNQNDKVIEDCSKSLEIVPDDPK-ALFRRCQAYEAIGKFEEAYTDAKHIHRVEPTNKAIQ 118 (401)
Q Consensus 50 ~~n~a~~y~klg~y~~Ai~~~~kAL~ldP~~~k-A~~~~a~a~~~lg~~eeA~~~~~kal~l~P~~~~~~ 118 (401)
.+++|.+++..|+|++|+..|+++++.+|+++. +++.+|.+|..+|++++|+..|+++++++|++..++
T Consensus 3 ~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~ 72 (99)
T 2kc7_A 3 QLKTIKELINQGDIENALQALEEFLQTEPVGKDEAYYLMGNAYRKLGDWQKALNNYQSAIELNPDSPALQ 72 (99)
T ss_dssp THHHHHHHHHHTCHHHHHHHHHHHHHHCSSTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHH
Confidence 367899999999999999999999999999999 999999999999999999999999999999998876
No 175
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=99.03 E-value=1.4e-10 Score=113.09 Aligned_cols=103 Identities=17% Similarity=0.119 Sum_probs=59.7
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhhcCCCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q psy4703 10 NKLKESGNSAFKQGDYETALDFYTKALKVTAEESHERATCLKNRAAVYLKQNQNDKVIEDCSKSLEIVPDDPKALFRRCQ 89 (401)
Q Consensus 10 ~~l~~~Gn~~~~~g~y~eAi~~y~~Al~l~~p~~~~~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~ldP~~~kA~~~~a~ 89 (401)
..+.+.|..+++.|+|++|+.+|+++++++ |+ +..+|+++|.+|+.+|+|++|+.+|+++++++|++..++..++.
T Consensus 231 ~~~~nla~~~~~~g~~~~A~~~~~~al~~~-p~---~~~a~~~lg~a~~~~g~~~~A~~~l~~al~l~p~~~~a~~~L~~ 306 (338)
T 2if4_A 231 PCHLNIAACLIKLKRYDEAIGHCNIVLTEE-EK---NPKALFRRGKAKAELGQMDSARDDFRKAQKYAPDDKAIRRELRA 306 (338)
T ss_dssp HHHHHHHHHHHTTTCCHHHHHHHHHHHHHC-TT---CHHHHHHHHHHHHTTTCHHHHHHHHHHTTC--------------
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-CC---CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHH
Confidence 378999999999999999999999999999 76 89999999999999999999999999999999999999999999
Q ss_pred H-HHHcCCHHHHHHHHHHHHhhCCCCcc
Q psy4703 90 A-YEAIGKFEEAYTDAKHIHRVEPTNKA 116 (401)
Q Consensus 90 a-~~~lg~~eeA~~~~~kal~l~P~~~~ 116 (401)
+ ....+.++.+...|++++..+|+++.
T Consensus 307 l~~~~~~~~~~a~~~~~~~l~~~p~~~~ 334 (338)
T 2if4_A 307 LAEQEKALYQKQKEMYKGIFKGKDEGGA 334 (338)
T ss_dssp ----------------------------
T ss_pred HHHHHHHHHHHHHHHHHHhhCCCCCCCC
Confidence 8 45667888999999999999998764
No 176
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=99.03 E-value=1e-09 Score=87.22 Aligned_cols=87 Identities=13% Similarity=0.185 Sum_probs=72.8
Q ss_pred CChhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcCCCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC--CH
Q psy4703 4 NNMNDYNKLKESGNSAFKQGDYETALDFYTKALKVTAEESHERATCLKNRAAVYLKQNQNDKVIEDCSKSLEIVPD--DP 81 (401)
Q Consensus 4 ~~p~~a~~l~~~Gn~~~~~g~y~eAi~~y~~Al~l~~p~~~~~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~ldP~--~~ 81 (401)
.+|+++..+...|..++..|+|++|+.+|+++++++ |+ +..+|+++|.+|..+|++++|+..|++++++.|. +.
T Consensus 2 ~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~-p~---~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~~~ 77 (100)
T 3ma5_A 2 EDPEDPFTRYALAQEHLKHDNASRALALFEELVETD-PD---YVGTYYHLGKLYERLDRTDDAIDTYAQGIEVAREEGTQ 77 (100)
T ss_dssp ---CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS-TT---CTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCH
T ss_pred CCccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-CC---cHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhhcCCch
Confidence 579999999999999999999999999999999999 76 7889999999999999999999999999999763 44
Q ss_pred HHHHHHHHHHHHc
Q psy4703 82 KALFRRCQAYEAI 94 (401)
Q Consensus 82 kA~~~~a~a~~~l 94 (401)
.+...+..++...
T Consensus 78 ~~~~~l~~~l~~~ 90 (100)
T 3ma5_A 78 KDLSELQDAKLKA 90 (100)
T ss_dssp HHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHc
Confidence 4444444444433
No 177
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=99.03 E-value=1.5e-09 Score=98.20 Aligned_cols=114 Identities=13% Similarity=0.008 Sum_probs=103.2
Q ss_pred hhHHHHHHHHHHHHHHcC----CHHHHHHHHHHHHhhcCCCCcchHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhC
Q psy4703 6 MNDYNKLKESGNSAFKQG----DYETALDFYTKALKVTAEESHERATCLKNRAAVYLK----QNQNDKVIEDCSKSLEIV 77 (401)
Q Consensus 6 p~~a~~l~~~Gn~~~~~g----~y~eAi~~y~~Al~l~~p~~~~~~~~~~n~a~~y~k----lg~y~~Ai~~~~kAL~ld 77 (401)
..++.++...|..+.. + ++++|+.+|+++++.. ++.+++++|.+|.. .+++++|+.+|+++++..
T Consensus 47 ~g~~~a~~~lg~~y~~-~g~~~~~~~A~~~~~~A~~~g------~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~ 119 (212)
T 3rjv_A 47 QGDGDALALLAQLKIR-NPQQADYPQARQLAEKAVEAG------SKSGEIVLARVLVNRQAGATDVAHAITLLQDAARDS 119 (212)
T ss_dssp TTCHHHHHHHHHHTTS-STTSCCHHHHHHHHHHHHHTT------CHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHTSST
T ss_pred cCCHHHHHHHHHHHHc-CCCCCCHHHHHHHHHHHHHCC------CHHHHHHHHHHHHcCCCCccCHHHHHHHHHHHHHcC
Confidence 3467888999999998 7 9999999999998766 78899999999998 899999999999999998
Q ss_pred C--CCHHHHHHHHHHHHH----cCCHHHHHHHHHHHHhhCCCCccHHHHHHHHHHH
Q psy4703 78 P--DDPKALFRRCQAYEA----IGKFEEAYTDAKHIHRVEPTNKAIQPVLSRLFAI 127 (401)
Q Consensus 78 P--~~~kA~~~~a~a~~~----lg~~eeA~~~~~kal~l~P~~~~~~~~L~~l~~~ 127 (401)
| .++.+++++|.+|.. .+++++|+.+|++++++ |.++.+...|+.++..
T Consensus 120 ~~~~~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~-~~~~~a~~~Lg~~y~~ 174 (212)
T 3rjv_A 120 ESDAAVDAQMLLGLIYASGVHGPEDDVKASEYFKGSSSL-SRTGYAEYWAGMMFQQ 174 (212)
T ss_dssp TSHHHHHHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHT-SCTTHHHHHHHHHHHH
T ss_pred CCcchHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHc-CCCHHHHHHHHHHHHc
Confidence 8 459999999999999 99999999999999999 7778888888888764
No 178
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=99.01 E-value=2.5e-09 Score=101.96 Aligned_cols=114 Identities=7% Similarity=-0.054 Sum_probs=89.5
Q ss_pred cCChhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcCCCCcc-hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC--CC
Q psy4703 3 DNNMNDYNKLKESGNSAFKQGDYETALDFYTKALKVTAEESHE-RATCLKNRAAVYLKQNQNDKVIEDCSKSLEIV--PD 79 (401)
Q Consensus 3 ~~~p~~a~~l~~~Gn~~~~~g~y~eAi~~y~~Al~l~~p~~~~-~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~ld--P~ 79 (401)
..+|.+. ..+..|..+++.|+|++|+.+|++++... + +. ...+++++|.++..+|++++|+.+|++++.-. |.
T Consensus 130 ~~~p~~~-~~~~~a~l~~~~~r~~dA~~~l~~a~~~~--d-~~~~~~a~~~LG~al~~LG~~~eAl~~l~~a~~g~~~P~ 205 (282)
T 4f3v_A 130 VAGSEHL-VAWMKAVVYGAAERWTDVIDQVKSAGKWP--D-KFLAGAAGVAHGVAAANLALFTEAERRLTEANDSPAGEA 205 (282)
T ss_dssp CTTCHHH-HHHHHHHHHHHTTCHHHHHHHHTTGGGCS--C-HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSTTTTT
T ss_pred hcCCchH-HHHHHHHHHHHcCCHHHHHHHHHHhhccC--C-cccHHHHHHHHHHHHHHCCCHHHHHHHHHHHhcCCCCcc
Confidence 4567777 88888888888888888888888776643 1 22 24578888888888888888888888888554 55
Q ss_pred -CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCccHHHHH
Q psy4703 80 -DPKALFRRCQAYEAIGKFEEAYTDAKHIHRVEPTNKAIQPVL 121 (401)
Q Consensus 80 -~~kA~~~~a~a~~~lg~~eeA~~~~~kal~l~P~~~~~~~~L 121 (401)
.+.+++++|.++..+|+.++|...|++++..+|+ +.+...|
T Consensus 206 ~~~da~~~~glaL~~lGr~deA~~~l~~a~a~~P~-~~~~~aL 247 (282)
T 4f3v_A 206 CARAIAWYLAMARRSQGNESAAVALLEWLQTTHPE-PKVAAAL 247 (282)
T ss_dssp THHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSCC-HHHHHHH
T ss_pred ccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCc-HHHHHHH
Confidence 5678888888888888888888888888888888 6665555
No 179
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=99.01 E-value=8.3e-09 Score=97.49 Aligned_cols=165 Identities=15% Similarity=0.019 Sum_probs=116.1
Q ss_pred hhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcCCCCcch---HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC--
Q psy4703 6 MNDYNKLKESGNSAFKQGDYETALDFYTKALKVTAEESHER---ATCLKNRAAVYLKQNQNDKVIEDCSKSLEIVPDD-- 80 (401)
Q Consensus 6 p~~a~~l~~~Gn~~~~~g~y~eAi~~y~~Al~l~~p~~~~~---~~~~~n~a~~y~klg~y~~Ai~~~~kAL~ldP~~-- 80 (401)
+.....+.+.+..++..|+|++|+..|.+++... +..+.. ...+..+|.+|...++|++|+.++++++.+.+..
T Consensus 72 ~~~~~~l~~~i~~~~~~~~y~~a~~~~~~~l~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~Ai~~~~~al~~~~~~~~ 150 (293)
T 3u3w_A 72 IERKKQFKDQVIMLCKQKRYKEIYNKVWNELKKE-EYHPEFQQFLQWQYYVAAYVLKKVDYEYCILELKKLLNQQLTGID 150 (293)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC-CCCHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHTCCCCSC
T ss_pred chhHHHHHHHHHHHHHHhhHHHHHHHHHHHhccc-cCChHHHHHHHHHHHHHHHHHcccCHHHHHHHHHHHHHHhccccc
Confidence 3445667778999999999999999999999977 543332 3355569999999999999999999999975432
Q ss_pred ----HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCC---CC----ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy4703 81 ----PKALFRRCQAYEAIGKFEEAYTDAKHIHRVEP---TN----KAIQPVLSRLFAIVTKRMQENEQLQNKVHNMFKYV 149 (401)
Q Consensus 81 ----~kA~~~~a~a~~~lg~~eeA~~~~~kal~l~P---~~----~~~~~~L~~l~~~~~~~~~a~~~~~~~~~~~~~~~ 149 (401)
..++.++|.+|..+|+|++|+..|++++++.. .+ ..+...++.++..+++..++...+ .++.++....
T Consensus 151 ~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y~~A~~~~-~~al~~~~~~ 229 (293)
T 3u3w_A 151 VYQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRYEESLYQV-NKAIEISCRI 229 (293)
T ss_dssp TTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHTTCHHHHHHHH-HHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHhHHHHHHHHH-HHHHHHHHHc
Confidence 44799999999999999999999999996321 22 346678888888888776665522 2222222222
Q ss_pred hcCCCChhHHHHHHHHHHHhhhc
Q psy4703 150 FDTSAPMDKRVTAVNNLVVLARE 172 (401)
Q Consensus 150 ~~~~~~~~~~~~a~~~L~~l~~~ 172 (401)
...............++..+++.
T Consensus 230 ~~~~~~~~~~~~lg~~~~~~g~~ 252 (293)
T 3u3w_A 230 NSMALIGQLYYQRGECLRKLEYE 252 (293)
T ss_dssp TBCTTHHHHHHHHHHHHHHTTCC
T ss_pred CcHHHHHHHHHHHHHHHHHhCCc
Confidence 11222234445555556666643
No 180
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=98.99 E-value=3.7e-09 Score=108.38 Aligned_cols=158 Identities=11% Similarity=0.050 Sum_probs=121.3
Q ss_pred ccCChhHHHHHHHHHHHHHH-------cCCHH-------HHHHHHHHHHh-hcCCCCcchHHHHHHHHHHHHHcCCHHHH
Q psy4703 2 IDNNMNDYNKLKESGNSAFK-------QGDYE-------TALDFYTKALK-VTAEESHERATCLKNRAAVYLKQNQNDKV 66 (401)
Q Consensus 2 i~~~p~~a~~l~~~Gn~~~~-------~g~y~-------eAi~~y~~Al~-l~~p~~~~~~~~~~n~a~~y~klg~y~~A 66 (401)
|..+|.++..|...|..+.. .|+++ +|+..|++|++ +. |+ ...+|.++|..+.+.|++++|
T Consensus 265 l~~~p~~~~~w~~~~~~~~~~~~~~~~~g~~~~a~~~~~~A~~~~~~Al~~~~-p~---~~~l~~~~~~~~~~~g~~~~A 340 (530)
T 2ooe_A 265 LLVLGHHPDIWYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLL-KK---NMLLYFAYADYEESRMKYEKV 340 (530)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHTTTTC-SS---CHHHHHHHHHHHHHTTCHHHH
T ss_pred HHhCCCCHHHHHHHHHHHHHhchhhhhccchhhhhhhhHHHHHHHHHHHHHhC-cc---cHHHHHHHHHHHHhcCCHHHH
Confidence 34568889999999999886 79987 99999999998 78 76 899999999999999999999
Q ss_pred HHHHHHHHHhCCCCH-HHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCccHHHHHHHHH-HHHHHHHHHHHHHHHHHHH
Q psy4703 67 IEDCSKSLEIVPDDP-KALFRRCQAYEAIGKFEEAYTDAKHIHRVEPTNKAIQPVLSRLF-AIVTKRMQENEQLQNKVHN 144 (401)
Q Consensus 67 i~~~~kAL~ldP~~~-kA~~~~a~a~~~lg~~eeA~~~~~kal~l~P~~~~~~~~L~~l~-~~~~~~~~a~~~~~~~~~~ 144 (401)
...|+++++++|.++ .+|..+|.++...|++++|...|+++++..|.+..+....+.+. ...++. ..+..
T Consensus 341 ~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~~~~~~~~~~~~~a~~~~~~~~~~--------~~A~~ 412 (530)
T 2ooe_A 341 HSIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDARTRHHVYVTAALMEYYCSKDK--------SVAFK 412 (530)
T ss_dssp HHHHHHHHHSSSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTCCTHHHHHHHHHHHHHTCCH--------HHHHH
T ss_pred HHHHHHHhCccccCchHHHHHHHHHHHHhcCHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHcCCh--------hHHHH
Confidence 999999999999986 69999999999999999999999999999887655544333221 112222 33455
Q ss_pred HHHHhhc-CCCChhHHHHHHHHHHHhhh
Q psy4703 145 MFKYVFD-TSAPMDKRVTAVNNLVVLAR 171 (401)
Q Consensus 145 ~~~~~~~-~~~~~~~~~~a~~~L~~l~~ 171 (401)
+|+.++. .|.+.......+..+...++
T Consensus 413 ~~e~al~~~p~~~~~~~~~~~~~~~~g~ 440 (530)
T 2ooe_A 413 IFELGLKKYGDIPEYVLAYIDYLSHLNE 440 (530)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHTTTTC
T ss_pred HHHHHHHHCCCCHHHHHHHHHHHHhCCC
Confidence 7777777 44444443333333333333
No 181
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=98.98 E-value=7.6e-09 Score=106.01 Aligned_cols=137 Identities=7% Similarity=-0.043 Sum_probs=120.1
Q ss_pred CChhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcCCCCcch-HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH
Q psy4703 4 NNMNDYNKLKESGNSAFKQGDYETALDFYTKALKVTAEESHER-ATCLKNRAAVYLKQNQNDKVIEDCSKSLEIVPDDPK 82 (401)
Q Consensus 4 ~~p~~a~~l~~~Gn~~~~~g~y~eAi~~y~~Al~l~~p~~~~~-~~~~~n~a~~y~klg~y~~Ai~~~~kAL~ldP~~~k 82 (401)
..|++...+...|..+...|++++|...|++++++. |. + ..+|.+.+.++.+.|++++|...|.+|++..|.+..
T Consensus 316 ~~p~~~~l~~~~~~~~~~~g~~~~A~~~~~~al~~~-p~---~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~~~~~~~~ 391 (530)
T 2ooe_A 316 LLKKNMLLYFAYADYEESRMKYEKVHSIYNRLLAIE-DI---DPTLVYIQYMKFARRAEGIKSGRMIFKKAREDARTRHH 391 (530)
T ss_dssp TCSSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSS-SS---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTCCTH
T ss_pred hCcccHHHHHHHHHHHHhcCCHHHHHHHHHHHhCcc-cc---CchHHHHHHHHHHHHhcCHHHHHHHHHHHHhccCCchH
Confidence 579999999999999999999999999999999998 75 4 358999999999999999999999999999998888
Q ss_pred HHHHHHHH-HHHcCCHHHHHHHHHHHHhhCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q psy4703 83 ALFRRCQA-YEAIGKFEEAYTDAKHIHRVEPTNKAIQPVLSRLFAIVTKRMQENEQLQNKVHNMFKYVFDT 152 (401)
Q Consensus 83 A~~~~a~a-~~~lg~~eeA~~~~~kal~l~P~~~~~~~~L~~l~~~~~~~~~a~~~~~~~~~~~~~~~~~~ 152 (401)
.+...+.+ +...|++++|...|+++++.+|+++.++..++.+....++.. .+..+|+++...
T Consensus 392 ~~~~~a~~~~~~~~~~~~A~~~~e~al~~~p~~~~~~~~~~~~~~~~g~~~--------~Ar~~~~~al~~ 454 (530)
T 2ooe_A 392 VYVTAALMEYYCSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYLSHLNEDN--------NTRVLFERVLTS 454 (530)
T ss_dssp HHHHHHHHHHHHTCCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTTTTCHH--------HHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHcCChhHHHHHHHHHHHHCCCCHHHHHHHHHHHHhCCCHh--------hHHHHHHHHHhc
Confidence 88776655 446999999999999999999999999999988877766653 345578888774
No 182
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=98.98 E-value=2.3e-09 Score=105.99 Aligned_cols=119 Identities=11% Similarity=0.091 Sum_probs=98.9
Q ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHH----------------hCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHh
Q psy4703 46 RATCLKNRAAVYLKQNQNDKVIEDCSKSLE----------------IVPDDPKALFRRCQAYEAIGKFEEAYTDAKHIHR 109 (401)
Q Consensus 46 ~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~----------------ldP~~~kA~~~~a~a~~~lg~~eeA~~~~~kal~ 109 (401)
.+..+.++|.++++.|+|++|+..|+++++ ++|.+..+|+++|.+|..+|+|++|+.+|+++++
T Consensus 222 ~a~~~~~~g~~~~~~g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~ 301 (370)
T 1ihg_A 222 ISEDLKNIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLKMSDWQGAVDSCLEALE 301 (370)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHH
Confidence 456789999999999999999999999999 7888899999999999999999999999999999
Q ss_pred hCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CCCChhHHHHHHHHHHHhhhc
Q psy4703 110 VEPTNKAIQPVLSRLFAIVTKRMQENEQLQNKVHNMFKYVFD-TSAPMDKRVTAVNNLVVLARE 172 (401)
Q Consensus 110 l~P~~~~~~~~L~~l~~~~~~~~~a~~~~~~~~~~~~~~~~~-~~~~~~~~~~a~~~L~~l~~~ 172 (401)
++|++..++..++.++..+++..++.. .|+.++. .|.+..........+..+++.
T Consensus 302 ~~p~~~~a~~~lg~~~~~~g~~~eA~~--------~l~~Al~l~P~~~~~~~~l~~~~~~~~~~ 357 (370)
T 1ihg_A 302 IDPSNTKALYRRAQGWQGLKEYDQALA--------DLKKAQEIAPEDKAIQAELLKVKQKIKAQ 357 (370)
T ss_dssp TCTTCHHHHHHHHHHHHHTTCHHHHHH--------HHHHHHHHCTTCHHHHHHHHHHHHHHHHH
T ss_pred hCchhHHHHHHHHHHHHHccCHHHHHH--------HHHHHHHhCCCCHHHHHHHHHHHHHHHHH
Confidence 999999999999999999888755544 6777777 444444444444444444443
No 183
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=98.96 E-value=4.6e-09 Score=87.39 Aligned_cols=105 Identities=22% Similarity=0.302 Sum_probs=90.6
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcC--CCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC------CC
Q psy4703 9 YNKLKESGNSAFKQGDYETALDFYTKALKVTA--EESHERATCLKNRAAVYLKQNQNDKVIEDCSKSLEIVP------DD 80 (401)
Q Consensus 9 a~~l~~~Gn~~~~~g~y~eAi~~y~~Al~l~~--p~~~~~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~ldP------~~ 80 (401)
+..+...|..++..|+|++|+.+|.+++++.+ ++.+....++.++|.+|..+|++++|+..+++++++.+ ..
T Consensus 49 ~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~ 128 (164)
T 3ro3_A 49 RIAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELKDRIGE 128 (164)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHccchHhH
Confidence 46788999999999999999999999999872 12233477899999999999999999999999998743 23
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC
Q psy4703 81 PKALFRRCQAYEAIGKFEEAYTDAKHIHRVEPT 113 (401)
Q Consensus 81 ~kA~~~~a~a~~~lg~~eeA~~~~~kal~l~P~ 113 (401)
..+++.+|.++..+|++++|+..+++++++...
T Consensus 129 ~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~ 161 (164)
T 3ro3_A 129 GRACWSLGNAYTALGNHDQAMHFAEKHLEISRE 161 (164)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHH
Confidence 678999999999999999999999999987543
No 184
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=98.96 E-value=2.5e-09 Score=86.30 Aligned_cols=90 Identities=10% Similarity=0.076 Sum_probs=77.5
Q ss_pred ccCChhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcCCCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC--
Q psy4703 2 IDNNMNDYNKLKESGNSAFKQGDYETALDFYTKALKVTAEESHERATCLKNRAAVYLKQNQNDKVIEDCSKSLEIVPD-- 79 (401)
Q Consensus 2 i~~~p~~a~~l~~~Gn~~~~~g~y~eAi~~y~~Al~l~~p~~~~~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~ldP~-- 79 (401)
++.+|.++..+...|..++..|+|++|+.+|+++++++ |+ ...+|+++|.+|..+|++++|+..|+++++++|.
T Consensus 12 l~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~-p~---~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~ 87 (115)
T 2kat_A 12 LAQGTDNMLLRFTLGKTYAEHEQFDAALPHLRAALDFD-PT---YSVAWKWLGKTLQGQGDRAGARQAWESGLAAAQSRG 87 (115)
T ss_dssp HTTTCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TT---CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHT
T ss_pred HHhCCCcHHHHHHHHHHHHHccCHHHHHHHHHHHHHHC-CC---cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhccccc
Confidence 56789999999999999999999999999999999999 76 7889999999999999999999999999999884
Q ss_pred CHHHHHHHHHHHHHcC
Q psy4703 80 DPKALFRRCQAYEAIG 95 (401)
Q Consensus 80 ~~kA~~~~a~a~~~lg 95 (401)
+..++..+...+..++
T Consensus 88 ~~~~~~~l~~~l~~l~ 103 (115)
T 2kat_A 88 DQQVVKELQVFLRRLA 103 (115)
T ss_dssp CHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHhc
Confidence 4455555544444333
No 185
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=98.95 E-value=5.5e-08 Score=95.38 Aligned_cols=165 Identities=10% Similarity=-0.040 Sum_probs=126.9
Q ss_pred ccCChhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcCCCCcchHHHHHHHHHHHHHcC-CHHHHHHHHHHHHHhCCCC
Q psy4703 2 IDNNMNDYNKLKESGNSAFKQGDYETALDFYTKALKVTAEESHERATCLKNRAAVYLKQN-QNDKVIEDCSKSLEIVPDD 80 (401)
Q Consensus 2 i~~~p~~a~~l~~~Gn~~~~~g~y~eAi~~y~~Al~l~~p~~~~~~~~~~n~a~~y~klg-~y~~Ai~~~~kAL~ldP~~ 80 (401)
|...|+-..++-.........+..++|+.+++++|.++ |+ +..+|..|+.++..++ .+++++..++.+|..+|++
T Consensus 47 i~y~~~y~~~~~~~r~~~~~~e~se~AL~lt~~~L~~n-P~---~ytaWn~R~~iL~~l~~~l~eEL~~~~~~L~~nPKn 122 (349)
T 3q7a_A 47 IMYSEEYKDAMDYFRAIAAKEEKSERALELTEIIVRMN-PA---HYTVWQYRFSLLTSLNKSLEDELRLMNEFAVQNLKS 122 (349)
T ss_dssp BCCCHHHHHHHHHHHHHHHTTCCSHHHHHHHHHHHHHC-TT---CHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTTCCC
T ss_pred eeeCHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhC-ch---hHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCCc
Confidence 34455666666666666666677789999999999999 77 9999999999999999 5999999999999999999
Q ss_pred HHHHHHHHHHHHHc-C-CHHHHHHHHHHHHhhCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CCCChh
Q psy4703 81 PKALFRRCQAYEAI-G-KFEEAYTDAKHIHRVEPTNKAIQPVLSRLFAIVTKRMQENEQLQNKVHNMFKYVFD-TSAPMD 157 (401)
Q Consensus 81 ~kA~~~~a~a~~~l-g-~~eeA~~~~~kal~l~P~~~~~~~~L~~l~~~~~~~~~a~~~~~~~~~~~~~~~~~-~~~~~~ 157 (401)
..+|+.|+.++..+ + ++++++..+.++++++|.|..++...+-+...++.........-....++++.++. .+.+..
T Consensus 123 y~aW~hR~wlL~~l~~~~~~~EL~~~~k~L~~dpkNy~AW~~R~wvl~~l~~~~~~~~~~~~eELe~~~k~I~~dp~N~S 202 (349)
T 3q7a_A 123 YQVWHHRLLLLDRISPQDPVSEIEYIHGSLLPDPKNYHTWAYLHWLYSHFSTLGRISEAQWGSELDWCNEMLRVDGRNNS 202 (349)
T ss_dssp HHHHHHHHHHHHHHCCSCCHHHHHHHHHHTSSCTTCHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHCTTCHH
T ss_pred HHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhccccccchhhHHHHHHHHHHHHHhCCCCHH
Confidence 99999999999999 8 99999999999999999999999988888777765431000001123345666666 445544
Q ss_pred HHHHHHHHHHHhh
Q psy4703 158 KRVTAVNNLVVLA 170 (401)
Q Consensus 158 ~~~~a~~~L~~l~ 170 (401)
.--.+...+..++
T Consensus 203 AW~~R~~lL~~l~ 215 (349)
T 3q7a_A 203 AWGWRWYLRVSRP 215 (349)
T ss_dssp HHHHHHHHHTTST
T ss_pred HHHHHHHHHHhcc
Confidence 4444444443333
No 186
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=98.89 E-value=1.4e-08 Score=88.86 Aligned_cols=114 Identities=13% Similarity=0.040 Sum_probs=88.5
Q ss_pred HHHcCCHHHHHHHHHHHHhhcCCCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHH------hCCCCHHHHHHHHHHHH
Q psy4703 19 AFKQGDYETALDFYTKALKVTAEESHERATCLKNRAAVYLKQNQNDKVIEDCSKSLE------IVPDDPKALFRRCQAYE 92 (401)
Q Consensus 19 ~~~~g~y~eAi~~y~~Al~l~~p~~~~~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~------ldP~~~kA~~~~a~a~~ 92 (401)
++..|+|++|...++.... + | .....++.++|.+|...|+|++|+..+.++++ ..|....+++++|.++.
T Consensus 2 ~~~~g~~~~A~~~~~~~~~-~-~--~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~ 77 (203)
T 3gw4_A 2 AFEAHDYALAERQAQALLA-H-P--ATASGARFMLGYVYAFMDRFDEARASFQALQQQAQKSGDHTAEHRALHQVGMVER 77 (203)
T ss_dssp -----CHHHHHHHHHHHHT-S-T--TTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred ccccccHHHHHHHHHHhcC-C-h--HHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHH
Confidence 5678999999996555433 5 3 24789999999999999999999999999999 44566789999999999
Q ss_pred HcCCHHHHHHHHHHHHhh---CCCC----ccHHHHHHHHHHHHHHHHHHHH
Q psy4703 93 AIGKFEEAYTDAKHIHRV---EPTN----KAIQPVLSRLFAIVTKRMQENE 136 (401)
Q Consensus 93 ~lg~~eeA~~~~~kal~l---~P~~----~~~~~~L~~l~~~~~~~~~a~~ 136 (401)
.+|++++|+..+++++++ .|++ ..+...++.++...++..++..
T Consensus 78 ~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~ 128 (203)
T 3gw4_A 78 MAGNWDAARRCFLEERELLASLPEDPLAASANAYEVATVALHFGDLAGARQ 128 (203)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHTCHHHHHH
T ss_pred HcCCHHHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHhCCHHHHHH
Confidence 999999999999999998 4433 3446677777777777655544
No 187
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=98.87 E-value=1.9e-08 Score=101.72 Aligned_cols=110 Identities=8% Similarity=-0.007 Sum_probs=92.8
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHhhcC----CCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-----CCCC---
Q psy4703 13 KESGNSAFKQGDYETALDFYTKALKVTA----EESHERATCLKNRAAVYLKQNQNDKVIEDCSKSLEI-----VPDD--- 80 (401)
Q Consensus 13 ~~~Gn~~~~~g~y~eAi~~y~~Al~l~~----p~~~~~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~l-----dP~~--- 80 (401)
.+.+......|+|++|+..|++++++.. |+++..+..+.|+|.+|..+|+|++|+..|+++|++ .|++
T Consensus 302 le~~~~~~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~ 381 (433)
T 3qww_A 302 IEEFRRAKHYKSPSELLEICELSQEKMSSVFEDSNVYMLHMMYQAMGVCLYMQDWEGALKYGQKIIKPYSKHYPVYSLNV 381 (433)
T ss_dssp HHHHHHHTTTSCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCSSCHHH
T ss_pred HHHHHHhhhccCHHHHHHHHHHHHHHhhCccChhchHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHcCCCChHH
Confidence 3445555567899999999999998643 678889999999999999999999999999999977 3555
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhh-----CCCCccHHHHHH
Q psy4703 81 PKALFRRCQAYEAIGKFEEAYTDAKHIHRV-----EPTNKAIQPVLS 122 (401)
Q Consensus 81 ~kA~~~~a~a~~~lg~~eeA~~~~~kal~l-----~P~~~~~~~~L~ 122 (401)
...++++|.+|..+|+|++|+..|++|+++ -|+++.+.....
T Consensus 382 a~~l~nLa~~~~~qg~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~l~~ 428 (433)
T 3qww_A 382 ASMWLKLGRLYMGLENKAAGEKALKKAIAIMEVAHGKDHPYISEIKQ 428 (433)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHcCCCChHHHHHHH
Confidence 557999999999999999999999999986 577776665443
No 188
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=98.86 E-value=4.2e-08 Score=99.01 Aligned_cols=119 Identities=8% Similarity=0.047 Sum_probs=99.4
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcC----CCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-----CCC
Q psy4703 9 YNKLKESGNSAFKQGDYETALDFYTKALKVTA----EESHERATCLKNRAAVYLKQNQNDKVIEDCSKSLEI-----VPD 79 (401)
Q Consensus 9 a~~l~~~Gn~~~~~g~y~eAi~~y~~Al~l~~----p~~~~~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~l-----dP~ 79 (401)
+.........+..+|+|++|+..|++++++.. |+++.....+.|+|.+|..+|+|++|+..|.++|++ .|+
T Consensus 287 ~~~ll~~ie~~~~~g~~~~a~~~~~~~L~~~~~~lg~~h~~~~~~~~~L~~~y~~~g~~~eA~~~~~~~L~i~~~~lg~~ 366 (429)
T 3qwp_A 287 VQESLKKIEELKAHWKWEQVLAMCQAIISSNSERLPDINIYQLKVLDCAMDACINLGLLEEALFYGTRTMEPYRIFFPGS 366 (429)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHTCSSCCCCTTSHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHSCSS
T ss_pred HHHHHHHHHHHHhhccHHHHHHHHHHHHHhccCcCCccchHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhHHHHcCCC
Confidence 34445556678889999999999999998643 677889999999999999999999999999999977 355
Q ss_pred C---HHHHHHHHHHHHHcCCHHHHHHHHHHHHhh-----CCCCccHHHHHHHHHHH
Q psy4703 80 D---PKALFRRCQAYEAIGKFEEAYTDAKHIHRV-----EPTNKAIQPVLSRLFAI 127 (401)
Q Consensus 80 ~---~kA~~~~a~a~~~lg~~eeA~~~~~kal~l-----~P~~~~~~~~L~~l~~~ 127 (401)
+ ...++++|.+|..+|+|++|+..|++|+++ -|+++.+...+..+...
T Consensus 367 Hp~~a~~l~nLa~~~~~~g~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~~~~~l~~~ 422 (429)
T 3qwp_A 367 HPVRGVQVMKVGKLQLHQGMFPQAMKNLRLAFDIMRVTHGREHSLIEDLILLLEEC 422 (429)
T ss_dssp CHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTSHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHH
Confidence 5 457999999999999999999999999976 67887777665544443
No 189
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=98.84 E-value=1.2e-08 Score=97.15 Aligned_cols=133 Identities=15% Similarity=0.066 Sum_probs=109.3
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhhcCCCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC--HHHHHHH
Q psy4703 10 NKLKESGNSAFKQGDYETALDFYTKALKVTAEESHERATCLKNRAAVYLKQNQNDKVIEDCSKSLEIVPDD--PKALFRR 87 (401)
Q Consensus 10 ~~l~~~Gn~~~~~g~y~eAi~~y~~Al~l~~p~~~~~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~ldP~~--~kA~~~~ 87 (401)
......+..+...|+|++|.+.|..++... |+ .. .++.+|.++++.++|++|+..+++++...+.. ..+++.+
T Consensus 103 dl~LayA~~L~~~g~y~eA~~~l~~~~~~~-p~---~~-~~~~~a~l~~~~~r~~dA~~~l~~a~~~~d~~~~~~a~~~L 177 (282)
T 4f3v_A 103 AITMGFAACEAAQGNYADAMEALEAAPVAG-SE---HL-VAWMKAVVYGAAERWTDVIDQVKSAGKWPDKFLAGAAGVAH 177 (282)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHTSSCCTT-CH---HH-HHHHHHHHHHHTTCHHHHHHHHTTGGGCSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHhcC-Cc---hH-HHHHHHHHHHHcCCHHHHHHHHHHhhccCCcccHHHHHHHH
Confidence 344567899999999999999999998888 65 66 89999999999999999999999887764222 3589999
Q ss_pred HHHHHHcCCHHHHHHHHHHHHhhC--CC-CccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCC
Q psy4703 88 CQAYEAIGKFEEAYTDAKHIHRVE--PT-NKAIQPVLSRLFAIVTKRMQENEQLQNKVHNMFKYVFDTSAP 155 (401)
Q Consensus 88 a~a~~~lg~~eeA~~~~~kal~l~--P~-~~~~~~~L~~l~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ 155 (401)
|.++..+|++++|+..|++++.-. |. ...+...++.+...+++..++.. .|+.+....+.
T Consensus 178 G~al~~LG~~~eAl~~l~~a~~g~~~P~~~~da~~~~glaL~~lGr~deA~~--------~l~~a~a~~P~ 240 (282)
T 4f3v_A 178 GVAAANLALFTEAERRLTEANDSPAGEACARAIAWYLAMARRSQGNESAAVA--------LLEWLQTTHPE 240 (282)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHTSTTTTTTHHHHHHHHHHHHHHHTCHHHHHH--------HHHHHHHHSCC
T ss_pred HHHHHHCCCHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHcCCHHHHHH--------HHHHHHhcCCc
Confidence 999999999999999999998543 54 45678888888888888755544 78888874444
No 190
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=98.82 E-value=3.4e-08 Score=85.29 Aligned_cols=100 Identities=10% Similarity=0.027 Sum_probs=87.7
Q ss_pred HHHHHHHHHHHHhhcCCCCcchHHHHHHHHHHHHHcC---CHHHHHHHHHHHHHhC-C-CCHHHHHHHHHHHHHcCCHHH
Q psy4703 25 YETALDFYTKALKVTAEESHERATCLKNRAAVYLKQN---QNDKVIEDCSKSLEIV-P-DDPKALFRRCQAYEAIGKFEE 99 (401)
Q Consensus 25 y~eAi~~y~~Al~l~~p~~~~~~~~~~n~a~~y~klg---~y~~Ai~~~~kAL~ld-P-~~~kA~~~~a~a~~~lg~~ee 99 (401)
...+.+.|.+.++.+ |. ...+.++.|.|+.+.+ +.++++..++.+++.+ | ++.+++|++|.+|+++|+|++
T Consensus 14 l~~~~~~y~~e~~~~-~~---~~~~~F~ya~~Lv~S~~~~~~~~gI~lLe~ll~~~~p~~~rd~lY~LAv~~~kl~~Y~~ 89 (152)
T 1pc2_A 14 LLKFEKKFQSEKAAG-SV---SKSTQFEYAWCLVRSKYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEK 89 (152)
T ss_dssp HHHHHHHHHHHHHTT-CC---CHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTSCHHH
T ss_pred HHHHHHHHHHHHccC-CC---cHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHHccCHHH
Confidence 456777888888877 54 7899999999999988 7789999999999999 7 679999999999999999999
Q ss_pred HHHHHHHHHhhCCCCccHHHHHHHHHHHH
Q psy4703 100 AYTDAKHIHRVEPTNKAIQPVLSRLFAIV 128 (401)
Q Consensus 100 A~~~~~kal~l~P~~~~~~~~L~~l~~~~ 128 (401)
|.++++++++++|+|.++......+...+
T Consensus 90 A~~y~~~lL~ieP~n~QA~~Lk~~ie~~~ 118 (152)
T 1pc2_A 90 ALKYVRGLLQTEPQNNQAKELERLIDKAM 118 (152)
T ss_dssp HHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCCHHHHHHHHHHHHHH
Confidence 99999999999999999888776555443
No 191
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.78 E-value=8.3e-08 Score=75.95 Aligned_cols=77 Identities=18% Similarity=0.084 Sum_probs=69.2
Q ss_pred cchHHHHHHHHHHHHHcCC---HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCccHHHH
Q psy4703 44 HERATCLKNRAAVYLKQNQ---NDKVIEDCSKSLEIVPDDPKALFRRCQAYEAIGKFEEAYTDAKHIHRVEPTNKAIQPV 120 (401)
Q Consensus 44 ~~~~~~~~n~a~~y~klg~---y~~Ai~~~~kAL~ldP~~~kA~~~~a~a~~~lg~~eeA~~~~~kal~l~P~~~~~~~~ 120 (401)
|.++.++..+|.+++..++ .++|...+.++|++||+++.+++.+|.+++..|+|++|+..|+++++.+|.++.....
T Consensus 3 p~~~~~~~~~a~al~~~~~~~~~~~A~~~l~~AL~~dp~~~rA~~~lg~~~~~~g~y~~Ai~~w~~~l~~~p~~~~~~~i 82 (93)
T 3bee_A 3 AVTATQLAAKATTLYYLHKQAMTDEVSLLLEQALQLEPYNEAALSLIANDHFISFRFQEAIDTWVLLLDSNDPNLDRVTI 82 (93)
T ss_dssp CCCHHHHHHHHHHHHHTTTTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTCCCTTCCHHHH
T ss_pred CCCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCccHHHH
Confidence 3489999999999987666 7999999999999999999999999999999999999999999999999996554333
No 192
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=98.74 E-value=3.9e-07 Score=92.23 Aligned_cols=112 Identities=13% Similarity=0.055 Sum_probs=98.0
Q ss_pred hhHHHHHHHHHHHHHH----cCCHHHHHHHHHHHHhhcCCCCcchHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhC
Q psy4703 6 MNDYNKLKESGNSAFK----QGDYETALDFYTKALKVTAEESHERATCLKNRAAVYLK----QNQNDKVIEDCSKSLEIV 77 (401)
Q Consensus 6 p~~a~~l~~~Gn~~~~----~g~y~eAi~~y~~Al~l~~p~~~~~~~~~~n~a~~y~k----lg~y~~Ai~~~~kAL~ld 77 (401)
+.++.++...|..++. .+++++|+.+|+++++.. ++.+++++|.+|.. .+++++|+.+|+++++.
T Consensus 36 ~g~~~a~~~lg~~y~~g~~~~~~~~~A~~~~~~a~~~~------~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~a~~~- 108 (490)
T 2xm6_A 36 SGEAKAQLELGYRYFQGNETTKDLTQAMDWFRRAAEQG------YTPAEYVLGLRYMNGEGVPQDYAQAVIWYKKAALK- 108 (490)
T ss_dssp TTCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT------CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT-
T ss_pred CCCHHHHHHHHHHHHcCCCCCcCHHHHHHHHHHHHHCC------CHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHC-
Confidence 4567888999999998 899999999999999877 68899999999999 89999999999999875
Q ss_pred CCCHHHHHHHHHHHHH----cCCHHHHHHHHHHHHhhCCCCccHHHHHHHHHHH
Q psy4703 78 PDDPKALFRRCQAYEA----IGKFEEAYTDAKHIHRVEPTNKAIQPVLSRLFAI 127 (401)
Q Consensus 78 P~~~kA~~~~a~a~~~----lg~~eeA~~~~~kal~l~P~~~~~~~~L~~l~~~ 127 (401)
.++.+++++|.+|.. .+++++|+..|+++.+. +++.+...|+.++..
T Consensus 109 -~~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~a~~~--~~~~a~~~Lg~~y~~ 159 (490)
T 2xm6_A 109 -GLPQAQQNLGVMYHEGNGVKVDKAESVKWFRLAAEQ--GRDSGQQSMGDAYFE 159 (490)
T ss_dssp -TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHH
T ss_pred -CCHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHC--CCHHHHHHHHHHHHc
Confidence 588999999999998 88999999999998765 577888888888765
No 193
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=98.73 E-value=1.5e-07 Score=91.16 Aligned_cols=127 Identities=13% Similarity=0.103 Sum_probs=98.5
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcCCCC---cchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC--------
Q psy4703 9 YNKLKESGNSAFKQGDYETALDFYTKALKVTAEES---HERATCLKNRAAVYLKQNQNDKVIEDCSKSLEIV-------- 77 (401)
Q Consensus 9 a~~l~~~Gn~~~~~g~y~eAi~~y~~Al~l~~p~~---~~~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~ld-------- 77 (401)
+..+...|..++..|++++|+..|.+++.+. |.. .....++.++|.++...|+|++|+..|++++++.
T Consensus 53 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~-~~~~~~~~~~~~~~~la~~~~~~G~~~~A~~~~~~al~~~~~~~~~~~ 131 (373)
T 1hz4_A 53 IVATSVLGEVLHCKGELTRSLALMQQTEQMA-RQHDVWHYALWSLIQQSEILFAQGFLQTAWETQEKAFQLINEQHLEQL 131 (373)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH-HHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCTTS
T ss_pred HHHHHHHHHHHHhcCcHHHHHHHHHHHHHHH-HhcCcHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhccccC
Confidence 3467788999999999999999999999887 421 1234557889999999999999999999999875
Q ss_pred CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCc-----cHHHHHHHHHHHHHHHHHHHH
Q psy4703 78 PDDPKALFRRCQAYEAIGKFEEAYTDAKHIHRVEPTNK-----AIQPVLSRLFAIVTKRMQENE 136 (401)
Q Consensus 78 P~~~kA~~~~a~a~~~lg~~eeA~~~~~kal~l~P~~~-----~~~~~L~~l~~~~~~~~~a~~ 136 (401)
|....++..+|.++...|++++|...+++++.+.|... .+...++.++...++..++..
T Consensus 132 ~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~ 195 (373)
T 1hz4_A 132 PMHEFLVRIRAQLLWAWARLDEAEASARSGIEVLSSYQPQQQLQCLAMLIQCSLARGDLDNARS 195 (373)
T ss_dssp THHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTSCGGGGHHHHHHHHHHHHHHTCHHHHHH
T ss_pred cHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhccCcHHHHHHHHHHHHHHHHcCCHHHHHH
Confidence 33456788899999999999999999999999887532 245566666666666654443
No 194
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=98.71 E-value=1.9e-07 Score=90.26 Aligned_cols=127 Identities=9% Similarity=0.066 Sum_probs=102.3
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcCCCCc--chHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC------
Q psy4703 9 YNKLKESGNSAFKQGDYETALDFYTKALKVTAEESH--ERATCLKNRAAVYLKQNQNDKVIEDCSKSLEIVPDD------ 80 (401)
Q Consensus 9 a~~l~~~Gn~~~~~g~y~eAi~~y~~Al~l~~p~~~--~~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~ldP~~------ 80 (401)
++.+...|..++..|++++|+.++++++... |... ....++.++|.+|...|++++|+..+.+++.+.|..
T Consensus 14 ~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~-~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~ 92 (373)
T 1hz4_A 14 AEFNALRAQVAINDGNPDEAERLAKLALEEL-PPGWFYSRIVATSVLGEVLHCKGELTRSLALMQQTEQMARQHDVWHYA 92 (373)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTC-CTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHcC-CCCchhHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhcCcHHHH
Confidence 5667788999999999999999999999998 5422 234578899999999999999999999999986533
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC--------CccHHHHHHHHHHHHHHHHHHHH
Q psy4703 81 PKALFRRCQAYEAIGKFEEAYTDAKHIHRVEPT--------NKAIQPVLSRLFAIVTKRMQENE 136 (401)
Q Consensus 81 ~kA~~~~a~a~~~lg~~eeA~~~~~kal~l~P~--------~~~~~~~L~~l~~~~~~~~~a~~ 136 (401)
..+++.+|.++...|++++|+..|++++++.+. ...+...++.++...++..++..
T Consensus 93 ~~~~~~la~~~~~~G~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~ 156 (373)
T 1hz4_A 93 LWSLIQQSEILFAQGFLQTAWETQEKAFQLINEQHLEQLPMHEFLVRIRAQLLWAWARLDEAEA 156 (373)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCTTSTHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhccccCcHHHHHHHHHHHHHHHhcCHHHHHH
Confidence 245789999999999999999999999987532 23345567777777776655444
No 195
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=98.69 E-value=1.5e-07 Score=75.51 Aligned_cols=80 Identities=21% Similarity=0.216 Sum_probs=57.8
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcCCC---CcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHH
Q psy4703 9 YNKLKESGNSAFKQGDYETALDFYTKALKVTAEE---SHERATCLKNRAAVYLKQNQNDKVIEDCSKSLEIVPDDPKALF 85 (401)
Q Consensus 9 a~~l~~~Gn~~~~~g~y~eAi~~y~~Al~l~~p~---~~~~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~ldP~~~kA~~ 85 (401)
+...+..|..++..|+|..|+..|.+|++..+++ ......++.++|.||+++|++++|+..++++++++|++..++.
T Consensus 5 a~dc~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~ 84 (104)
T 2v5f_A 5 AEDCFELGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPEHQRANG 84 (104)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred HHHHHHHHHHHHHccchHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHh
Confidence 4566778888888888888888888887764111 1236677777777777777777777777777777777777766
Q ss_pred HHH
Q psy4703 86 RRC 88 (401)
Q Consensus 86 ~~a 88 (401)
+++
T Consensus 85 n~~ 87 (104)
T 2v5f_A 85 NLK 87 (104)
T ss_dssp HHH
T ss_pred hHH
Confidence 665
No 196
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.68 E-value=1.9e-07 Score=78.80 Aligned_cols=97 Identities=12% Similarity=0.087 Sum_probs=79.0
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHhhcCCCCcchHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q psy4703 15 SGNSAFKQGDYETALDFYTKALKVTAEESHERATCLKNRAAVYLK----QNQNDKVIEDCSKSLEIVPDDPKALFRRCQA 90 (401)
Q Consensus 15 ~Gn~~~~~g~y~eAi~~y~~Al~l~~p~~~~~~~~~~n~a~~y~k----lg~y~~Ai~~~~kAL~ldP~~~kA~~~~a~a 90 (401)
.|..+...+.+++|+.+|+++.+.. ++.+++++|.+|.. .+++++|+.+|+++.+. .++.+++++|.+
T Consensus 31 lg~~y~~g~~~~~A~~~~~~Aa~~g------~~~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~--g~~~a~~~Lg~~ 102 (138)
T 1klx_A 31 LSLVSNSQINKQKLFQYLSKACELN------SGNGCRFLGDFYENGKYVKKDLRKAAQYYSKACGL--NDQDGCLILGYK 102 (138)
T ss_dssp HHHHTCTTSCHHHHHHHHHHHHHTT------CHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHT--TCHHHHHHHHHH
T ss_pred HHHHHHcCCCHHHHHHHHHHHHcCC------CHHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHcC--CCHHHHHHHHHH
Confidence 6777777788888888888888887 77888888888888 78888888888888876 678888888888
Q ss_pred HHH----cCCHHHHHHHHHHHHhhCCCCccHHHHH
Q psy4703 91 YEA----IGKFEEAYTDAKHIHRVEPTNKAIQPVL 121 (401)
Q Consensus 91 ~~~----lg~~eeA~~~~~kal~l~P~~~~~~~~L 121 (401)
|.. .+++++|+.+|+++.+. .++.+...|
T Consensus 103 y~~G~g~~~d~~~A~~~~~~Aa~~--g~~~A~~~l 135 (138)
T 1klx_A 103 QYAGKGVVKNEKQAVKTFEKACRL--GSEDACGIL 135 (138)
T ss_dssp HHHTSSSCCCHHHHHHHHHHHHHT--TCHHHHHHC
T ss_pred HHCCCCCCcCHHHHHHHHHHHHHC--CCHHHHHHH
Confidence 888 88888888888888876 344444444
No 197
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=98.68 E-value=3.8e-07 Score=92.34 Aligned_cols=110 Identities=19% Similarity=0.103 Sum_probs=61.4
Q ss_pred HHHHHHHHHHHHHH----cCCHHHHHHHHHHHHhhcCCCCcchHHHHHHHHHHHHHc-----CCHHHHHHHHHHHHHhCC
Q psy4703 8 DYNKLKESGNSAFK----QGDYETALDFYTKALKVTAEESHERATCLKNRAAVYLKQ-----NQNDKVIEDCSKSLEIVP 78 (401)
Q Consensus 8 ~a~~l~~~Gn~~~~----~g~y~eAi~~y~~Al~l~~p~~~~~~~~~~n~a~~y~kl-----g~y~~Ai~~~~kAL~ldP 78 (401)
++.++...|..+.. .+++++|+.+|+++++.. +..+++++|.+|... +++++|+.+|+++++.
T Consensus 254 ~~~a~~~lg~~y~~g~~~~~d~~~A~~~~~~a~~~~------~~~a~~~Lg~~y~~~~~g~~~~~~~A~~~~~~a~~~-- 325 (490)
T 2xm6_A 254 NSIAQFRLGYILEQGLAGAKEPLKALEWYRKSAEQG------NSDGQYYLAHLYDKGAEGVAKNREQAISWYTKSAEQ-- 325 (490)
T ss_dssp CHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHTTT------CHHHHHHHHHHHHHCBTTBCCCHHHHHHHHHHHHHT--
T ss_pred CHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHcC------CHHHHHHHHHHHHcCCCCCcCCHHHHHHHHHHHHhc--
Confidence 34455555665555 566666666666665544 444555566665555 5566666666655554
Q ss_pred CCHHHHHHHHHHHHHcC---CHHHHHHHHHHHHhhCCCCccHHHHHHHHHHH
Q psy4703 79 DDPKALFRRCQAYEAIG---KFEEAYTDAKHIHRVEPTNKAIQPVLSRLFAI 127 (401)
Q Consensus 79 ~~~kA~~~~a~a~~~lg---~~eeA~~~~~kal~l~P~~~~~~~~L~~l~~~ 127 (401)
.++.+++++|.+|...| ++++|+.+|+++++. +++.++..|+.++..
T Consensus 326 ~~~~a~~~lg~~y~~~g~~~~~~~A~~~~~~a~~~--~~~~a~~~Lg~~y~~ 375 (490)
T 2xm6_A 326 GDATAQANLGAIYFRLGSEEEHKKAVEWFRKAAAK--GEKAAQFNLGNALLQ 375 (490)
T ss_dssp TCHHHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhCCCcccHHHHHHHHHHHHHC--CCHHHHHHHHHHHHc
Confidence 34455555555555544 555555555555554 345555555555544
No 198
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=98.68 E-value=2.3e-07 Score=74.39 Aligned_cols=79 Identities=14% Similarity=0.045 Sum_probs=70.5
Q ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-------CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCccHH
Q psy4703 46 RATCLKNRAAVYLKQNQNDKVIEDCSKSLEIV-------PDDPKALFRRCQAYEAIGKFEEAYTDAKHIHRVEPTNKAIQ 118 (401)
Q Consensus 46 ~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~ld-------P~~~kA~~~~a~a~~~lg~~eeA~~~~~kal~l~P~~~~~~ 118 (401)
.+.-.+.+|..++..++|..|+.+++.|++.. +..+..+..+|.++.++|+++.|+..++++++++|+++.+.
T Consensus 4 sa~dc~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~~g~~~~A~~~~~~al~l~P~~~~~~ 83 (104)
T 2v5f_A 4 TAEDCFELGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPEHQRAN 83 (104)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred CHHHHHHHHHHHHHccchHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHH
Confidence 45667899999999999999999999999973 34678899999999999999999999999999999998887
Q ss_pred HHHHHH
Q psy4703 119 PVLSRL 124 (401)
Q Consensus 119 ~~L~~l 124 (401)
.+++-+
T Consensus 84 ~n~~~~ 89 (104)
T 2v5f_A 84 GNLKYF 89 (104)
T ss_dssp HHHHHH
T ss_pred hhHHHH
Confidence 777633
No 199
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=98.67 E-value=5.5e-08 Score=99.79 Aligned_cols=108 Identities=11% Similarity=0.053 Sum_probs=96.5
Q ss_pred CChhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcC----CCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh---
Q psy4703 4 NNMNDYNKLKESGNSAFKQGDYETALDFYTKALKVTA----EESHERATCLKNRAAVYLKQNQNDKVIEDCSKSLEI--- 76 (401)
Q Consensus 4 ~~p~~a~~l~~~Gn~~~~~g~y~eAi~~y~~Al~l~~----p~~~~~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~l--- 76 (401)
.+|..+..+.+.|..|..+|+|++|+.+|.+++++.. |++|..+..+.|+|.+|..+|+|++|+..|++|+++
T Consensus 346 ~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa~~~~~~G~~~eA~~~~~~Al~i~~~ 425 (490)
T 3n71_A 346 TNLYVLRLLSIASEVLSYLQAYEEASHYARRMVDGYMKLYHHNNAQLGMAVMRAGLTNWHAGHIEVGHGMICKAYAILLV 425 (490)
T ss_dssp TSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Confidence 5788899999999999999999999999999998642 778999999999999999999999999999999986
Q ss_pred --CCCCH---HHHHHHHHHHHHcCCHHHHHHHHHHHHhhC
Q psy4703 77 --VPDDP---KALFRRCQAYEAIGKFEEAYTDAKHIHRVE 111 (401)
Q Consensus 77 --dP~~~---kA~~~~a~a~~~lg~~eeA~~~~~kal~l~ 111 (401)
.|+++ +.+-.+++++..++.|.+|...|+++.+-.
T Consensus 426 ~lG~~Hp~~~~~~~~l~~~~~e~~~~~~ae~~~~~~~~~~ 465 (490)
T 3n71_A 426 THGPSHPITKDLEAMRMQTEMELRMFRQNEFMYHKMREAA 465 (490)
T ss_dssp HTCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46664 456789999999999999999999886543
No 200
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=98.55 E-value=7.5e-07 Score=89.91 Aligned_cols=108 Identities=14% Similarity=0.087 Sum_probs=92.2
Q ss_pred HHHHHHHHHHHHcC---CHHHHHHHHHHHHhhcCCCCcchHHHHHHHHHHHHHc----CCHHHHHHHHHHHHHhCCCCHH
Q psy4703 10 NKLKESGNSAFKQG---DYETALDFYTKALKVTAEESHERATCLKNRAAVYLKQ----NQNDKVIEDCSKSLEIVPDDPK 82 (401)
Q Consensus 10 ~~l~~~Gn~~~~~g---~y~eAi~~y~~Al~l~~p~~~~~~~~~~n~a~~y~kl----g~y~~Ai~~~~kAL~ldP~~~k 82 (401)
.++...|..+...| ++++|+..|+++++.. |. .+..++++|.+|... +++++|+.+|+++. |+++.
T Consensus 177 ~a~~~Lg~~~~~~g~~~~~~~A~~~~~~aa~~g-~~---~a~~~~~Lg~~y~~g~~~~~d~~~A~~~~~~aa---~g~~~ 249 (452)
T 3e4b_A 177 ICYVELATVYQKKQQPEQQAELLKQMEAGVSRG-TV---TAQRVDSVARVLGDATLGTPDEKTAQALLEKIA---PGYPA 249 (452)
T ss_dssp THHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTT-CS---CHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHG---GGSTH
T ss_pred HHHHHHHHHHHHcCCcccHHHHHHHHHHHHHCC-CH---HHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHc---CCCHH
Confidence 37788899999999 9999999999999998 54 677778899999766 78999999999988 88999
Q ss_pred HHHHHHHH-H--HHcCCHHHHHHHHHHHHhhCCCCccHHHHHHHHHH
Q psy4703 83 ALFRRCQA-Y--EAIGKFEEAYTDAKHIHRVEPTNKAIQPVLSRLFA 126 (401)
Q Consensus 83 A~~~~a~a-~--~~lg~~eeA~~~~~kal~l~P~~~~~~~~L~~l~~ 126 (401)
+++++|.+ + ...+++++|+.+|+++.+. +++.+...|+.++.
T Consensus 250 a~~~Lg~~~~~~~~~~d~~~A~~~~~~Aa~~--g~~~A~~~Lg~~y~ 294 (452)
T 3e4b_A 250 SWVSLAQLLYDFPELGDVEQMMKYLDNGRAA--DQPRAELLLGKLYY 294 (452)
T ss_dssp HHHHHHHHHHHSGGGCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCHHHHHHHHHHHHHC--CCHHHHHHHHHHHH
Confidence 99999998 4 5788999999999998864 57888888888876
No 201
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=98.54 E-value=9.1e-06 Score=91.38 Aligned_cols=108 Identities=15% Similarity=0.226 Sum_probs=92.1
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhhcCCCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-----------
Q psy4703 10 NKLKESGNSAFKQGDYETALDFYTKALKVTAEESHERATCLKNRAAVYLKQNQNDKVIEDCSKSLEIVP----------- 78 (401)
Q Consensus 10 ~~l~~~Gn~~~~~g~y~eAi~~y~~Al~l~~p~~~~~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~ldP----------- 78 (401)
..+...|..++..|+|++|+.+|.+| ..|..+|.||.++|+|++|++.+.+|...++
T Consensus 1196 ad~~~iGd~le~eg~YeeA~~~Y~kA------------~ny~rLA~tLvkLge~q~AIEaarKA~n~~aWkev~~acve~ 1263 (1630)
T 1xi4_A 1196 AHIQQVGDRCYDEKMYDAAKLLYNNV------------SNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFACVDG 1263 (1630)
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHhh------------hHHHHHHHHHHHhCCHHHHHHHHHHhCCHHHHHHHHHHHhhh
Confidence 46678999999999999999999984 2678899999999999999999998855543
Q ss_pred --------------CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCccHHHHHHHHHHHHH
Q psy4703 79 --------------DDPKALFRRCQAYEAIGKFEEAYTDAKHIHRVEPTNKAIQPVLSRLFAIVT 129 (401)
Q Consensus 79 --------------~~~kA~~~~a~a~~~lg~~eeA~~~~~kal~l~P~~~~~~~~L~~l~~~~~ 129 (401)
.++..+..++..|...|.|++|+..+++++.++|.+..+...|+.++...+
T Consensus 1264 ~Ef~LA~~cgl~Iiv~~deLeeli~yYe~~G~feEAI~LlE~aL~LeraH~gmftELaiLyaKy~ 1328 (1630)
T 1xi4_A 1264 KEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTELAILYSKFK 1328 (1630)
T ss_pred hHHHHHHHHHHhhhcCHHHHHHHHHHHHHcCCHHHHHHHHHHHhccChhHhHHHHHHHHHHHhCC
Confidence 245566678889999999999999999999999999889888888776543
No 202
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.46 E-value=8.7e-07 Score=74.65 Aligned_cols=109 Identities=17% Similarity=0.124 Sum_probs=91.2
Q ss_pred CCHHHHHHHHHHHHhhcCCCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH----cCCHH
Q psy4703 23 GDYETALDFYTKALKVTAEESHERATCLKNRAAVYLKQNQNDKVIEDCSKSLEIVPDDPKALFRRCQAYEA----IGKFE 98 (401)
Q Consensus 23 g~y~eAi~~y~~Al~l~~p~~~~~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~ldP~~~kA~~~~a~a~~~----lg~~e 98 (401)
+++++|+.+|+++.+.. . +.+. +|.+|...+.+++|+.+|+++.+. .++.+++++|.+|.. .++++
T Consensus 9 ~d~~~A~~~~~~aa~~g-~-----~~a~--lg~~y~~g~~~~~A~~~~~~Aa~~--g~~~a~~~Lg~~y~~G~g~~~d~~ 78 (138)
T 1klx_A 9 KDLKKAIQYYVKACELN-E-----MFGC--LSLVSNSQINKQKLFQYLSKACEL--NSGNGCRFLGDFYENGKYVKKDLR 78 (138)
T ss_dssp HHHHHHHHHHHHHHHTT-C-----TTHH--HHHHTCTTSCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHCSSSCCCHH
T ss_pred cCHHHHHHHHHHHHcCC-C-----Hhhh--HHHHHHcCCCHHHHHHHHHHHHcC--CCHHHHHHHHHHHHcCCCCCccHH
Confidence 47899999999999988 2 2333 999999999999999999999997 689999999999999 99999
Q ss_pred HHHHHHHHHHhhCCCCccHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHhhc
Q psy4703 99 EAYTDAKHIHRVEPTNKAIQPVLSRLFAI----VTKRMQENEQLQNKVHNMFKYVFD 151 (401)
Q Consensus 99 eA~~~~~kal~l~P~~~~~~~~L~~l~~~----~~~~~~a~~~~~~~~~~~~~~~~~ 151 (401)
+|+.+|+++.+. .++.+...|+.++.. .++..+ +..+|+++.+
T Consensus 79 ~A~~~~~~Aa~~--g~~~a~~~Lg~~y~~G~g~~~d~~~--------A~~~~~~Aa~ 125 (138)
T 1klx_A 79 KAAQYYSKACGL--NDQDGCLILGYKQYAGKGVVKNEKQ--------AVKTFEKACR 125 (138)
T ss_dssp HHHHHHHHHHHT--TCHHHHHHHHHHHHHTSSSCCCHHH--------HHHHHHHHHH
T ss_pred HHHHHHHHHHcC--CCHHHHHHHHHHHHCCCCCCcCHHH--------HHHHHHHHHH
Confidence 999999999987 678899999988876 444433 3446666655
No 203
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=98.46 E-value=1.2e-06 Score=88.51 Aligned_cols=111 Identities=13% Similarity=0.094 Sum_probs=69.7
Q ss_pred CChhHHHHHHHHHHHHHHc----CCHHHHHHHHHHHHhhcCCCCcchHHHHHHHHHH-H--HHcCCHHHHHHHHHHHHHh
Q psy4703 4 NNMNDYNKLKESGNSAFKQ----GDYETALDFYTKALKVTAEESHERATCLKNRAAV-Y--LKQNQNDKVIEDCSKSLEI 76 (401)
Q Consensus 4 ~~p~~a~~l~~~Gn~~~~~----g~y~eAi~~y~~Al~l~~p~~~~~~~~~~n~a~~-y--~klg~y~~Ai~~~~kAL~l 76 (401)
..+..+..+...|..+... +++++|+.+|+++. .. ++.+++++|.+ | ...+++++|+.+|+++++.
T Consensus 208 ~g~~~a~~~~~Lg~~y~~g~~~~~d~~~A~~~~~~aa-~g------~~~a~~~Lg~~~~~~~~~~d~~~A~~~~~~Aa~~ 280 (452)
T 3e4b_A 208 RGTVTAQRVDSVARVLGDATLGTPDEKTAQALLEKIA-PG------YPASWVSLAQLLYDFPELGDVEQMMKYLDNGRAA 280 (452)
T ss_dssp TTCSCHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHG-GG------STHHHHHHHHHHHHSGGGCCHHHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHc-CC------CHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHC
Confidence 3445555556666666544 56677777777666 22 55566666666 3 3456677777777766654
Q ss_pred CCCCHHHHHHHHHHHHHcC-----CHHHHHHHHHHHHhhCCCCccHHHHHHHHHHH
Q psy4703 77 VPDDPKALFRRCQAYEAIG-----KFEEAYTDAKHIHRVEPTNKAIQPVLSRLFAI 127 (401)
Q Consensus 77 dP~~~kA~~~~a~a~~~lg-----~~eeA~~~~~kal~l~P~~~~~~~~L~~l~~~ 127 (401)
+++.+++++|.+|. .| ++++|+.+|+++. |+++.+...|+.++..
T Consensus 281 --g~~~A~~~Lg~~y~-~G~g~~~d~~~A~~~~~~Aa---~g~~~A~~~Lg~~y~~ 330 (452)
T 3e4b_A 281 --DQPRAELLLGKLYY-EGKWVPADAKAAEAHFEKAV---GREVAADYYLGQIYRR 330 (452)
T ss_dssp --TCHHHHHHHHHHHH-HCSSSCCCHHHHHHHHHTTT---TTCHHHHHHHHHHHHT
T ss_pred --CCHHHHHHHHHHHH-cCCCCCCCHHHHHHHHHHHh---CCCHHHHHHHHHHHHC
Confidence 36666777776666 44 6777777776666 6666666666666554
No 204
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=98.43 E-value=1.1e-06 Score=86.23 Aligned_cols=130 Identities=10% Similarity=0.066 Sum_probs=96.5
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcCCCC---cchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC------
Q psy4703 8 DYNKLKESGNSAFKQGDYETALDFYTKALKVTAEES---HERATCLKNRAAVYLKQNQNDKVIEDCSKSLEIVP------ 78 (401)
Q Consensus 8 ~a~~l~~~Gn~~~~~g~y~eAi~~y~~Al~l~~p~~---~~~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~ldP------ 78 (401)
...++...|..|+..|+|++|+++|.+++... +.- .....++.+++.++...|++++|+..|.+++...+
T Consensus 54 ~~~al~~l~~~y~~~~~~~~a~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~ 132 (434)
T 4b4t_Q 54 QETSILELGQLYVTMGAKDKLREFIPHSTEYM-MQFAKSKTVKVLKTLIEKFEQVPDSLDDQIFVCEKSIEFAKREKRVF 132 (434)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHTHHHH-HTSCHHHHHHHHHHHHHHHCSCCSCHHHHHHHHHHHHHHHHHSSCCS
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH-HHccchHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhCccH
Confidence 34568899999999999999999999998876 421 12334566777777788888888888888877632
Q ss_pred CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCC------CCccHHHHHHHHHHHHHHHHHHHHHH
Q psy4703 79 DDPKALFRRCQAYEAIGKFEEAYTDAKHIHRVEP------TNKAIQPVLSRLFAIVTKRMQENEQL 138 (401)
Q Consensus 79 ~~~kA~~~~a~a~~~lg~~eeA~~~~~kal~l~P------~~~~~~~~L~~l~~~~~~~~~a~~~~ 138 (401)
.....+.++|.+|...|+|++|+..+++++.... ....+...+++++...++..++...+
T Consensus 133 ~~~~~~~~la~~~~~~g~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~ 198 (434)
T 4b4t_Q 133 LKHSLSIKLATLHYQKKQYKDSLALINDLLREFKKLDDKPSLVDVHLLESKVYHKLRNLAKSKASL 198 (434)
T ss_dssp SHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSSCSTHHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHccChHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHhCcHHHHHHHH
Confidence 3367788888888888888888888888876522 12346667777877777777766543
No 205
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=98.38 E-value=3.9e-06 Score=82.55 Aligned_cols=125 Identities=10% Similarity=0.085 Sum_probs=76.4
Q ss_pred HHHHHHHHHHHHHcCC---HHHHHHHHHHHHhhcCCCCcchHHHHHHHHHHHHHcCCH-------HHHHH-HHH--HHHH
Q psy4703 9 YNKLKESGNSAFKQGD---YETALDFYTKALKVTAEESHERATCLKNRAAVYLKQNQN-------DKVIE-DCS--KSLE 75 (401)
Q Consensus 9 a~~l~~~Gn~~~~~g~---y~eAi~~y~~Al~l~~p~~~~~~~~~~n~a~~y~klg~y-------~~Ai~-~~~--kAL~ 75 (401)
+-.++.+|..++..++ +.+|+.+|++|++++ |+ ++.+|..++.||.-...+ ..++. .+. .++.
T Consensus 196 Aydl~Lra~~~l~~~~~~~~~~A~~l~e~Al~lD-P~---~a~A~A~la~a~~~~~~~~~~~~~~~~~l~~a~~a~~a~~ 271 (372)
T 3ly7_A 196 LLTNFYQAHDYLLHGDDKSLNRASELLGEIVQSS-PE---FTYARAEKALVDIVRHSQHPLDEKQLAALNTEIDNIVTLP 271 (372)
T ss_dssp GHHHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHC-TT---CHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHTCG
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhC-CC---CHHHHHHHHHHHHHHhccCCCchhhHHHHHHHHHHHHhcc
Confidence 4456778888887655 478999999999999 77 777777766666521111 01111 111 1234
Q ss_pred hCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCccHHHHHHHHHHHHHHHHHHHHHH
Q psy4703 76 IVPDDPKALFRRCQAYEAIGKFEEAYTDAKHIHRVEPTNKAIQPVLSRLFAIVTKRMQENEQL 138 (401)
Q Consensus 76 ldP~~~kA~~~~a~a~~~lg~~eeA~~~~~kal~l~P~~~~~~~~L~~l~~~~~~~~~a~~~~ 138 (401)
.+|.++.+|..+|.++...|++++|+..+++|+.++|+ ...+..++.++...++..++...+
T Consensus 272 ~~~~~a~~~~alal~~l~~gd~d~A~~~l~rAl~Ln~s-~~a~~llG~~~~~~G~~~eA~e~~ 333 (372)
T 3ly7_A 272 ELNNLSIIYQIKAVSALVKGKTDESYQAINTGIDLEMS-WLNYVLLGKVYEMKGMNREAADAY 333 (372)
T ss_dssp GGTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCC-HHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred cCCcCHHHHHHHHHHHHhCCCHHHHHHHHHHHHhcCCC-HHHHHHHHHHHHHCCCHHHHHHHH
Confidence 45666666666666666666666666666666666653 334455666666666665555544
No 206
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=98.37 E-value=1.3e-05 Score=77.12 Aligned_cols=128 Identities=14% Similarity=0.093 Sum_probs=99.4
Q ss_pred hhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcCCCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC----CH
Q psy4703 6 MNDYNKLKESGNSAFKQGDYETALDFYTKALKVTAEESHERATCLKNRAAVYLKQNQNDKVIEDCSKSLEIVPD----DP 81 (401)
Q Consensus 6 p~~a~~l~~~Gn~~~~~g~y~eAi~~y~~Al~l~~p~~~~~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~ldP~----~~ 81 (401)
+.....+...|..+...|++++|+..+.++|..+ |. +....++...+.+|+++|+.+.|...+++..+.+|+ +-
T Consensus 97 ~~~~~~~~~la~i~~~~g~~eeAL~~l~~~i~~~-~~-~~~lea~~l~vqi~L~~~r~d~A~k~l~~~~~~~~d~~~~~d 174 (310)
T 3mv2_B 97 QNSPYELYLLATAQAILGDLDKSLETCVEGIDND-EA-EGTTELLLLAIEVALLNNNVSTASTIFDNYTNAIEDTVSGDN 174 (310)
T ss_dssp CCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHTSS-CS-TTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCHHHHHHH
T ss_pred CCCcHHHHHHHHHHHHcCCHHHHHHHHHHHhccC-CC-cCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCccccccch
Confidence 3445556789999999999999999999999988 62 348899999999999999999999999999999984 23
Q ss_pred HHHHHHHHH--HHHcC--CHHHHHHHHHHHHhhCCCCccHHHHHHHHHHHHHHHHHHHH
Q psy4703 82 KALFRRCQA--YEAIG--KFEEAYTDAKHIHRVEPTNKAIQPVLSRLFAIVTKRMQENE 136 (401)
Q Consensus 82 kA~~~~a~a--~~~lg--~~eeA~~~~~kal~l~P~~~~~~~~L~~l~~~~~~~~~a~~ 136 (401)
..+..++.+ .+..| ++.+|+..|+++.+..|+.......+. ++..+++..+++.
T Consensus 175 ~~l~~Laea~v~l~~g~~~~q~A~~~f~El~~~~p~~~~~~lLln-~~~~~g~~~eAe~ 232 (310)
T 3mv2_B 175 EMILNLAESYIKFATNKETATSNFYYYEELSQTFPTWKTQLGLLN-LHLQQRNIAEAQG 232 (310)
T ss_dssp HHHHHHHHHHHHHHHTCSTTTHHHHHHHHHHTTSCSHHHHHHHHH-HHHHHTCHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhCCCcccHHHHHH-HHHHcCCHHHHHH
Confidence 445555555 66667 999999999999888876222222233 6677777766555
No 207
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=98.37 E-value=1.4e-06 Score=85.66 Aligned_cols=126 Identities=13% Similarity=0.087 Sum_probs=101.9
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhhcCCCC--------------cchHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q psy4703 10 NKLKESGNSAFKQGDYETALDFYTKALKVTAEES--------------HERATCLKNRAAVYLKQNQNDKVIEDCSKSLE 75 (401)
Q Consensus 10 ~~l~~~Gn~~~~~g~y~eAi~~y~~Al~l~~p~~--------------~~~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~ 75 (401)
....++|..+++.|+|++|++.|.++++.. |.. .....++.++|.+|...|+|++|+..+.+++.
T Consensus 5 ~~~l~~a~~l~~~~~y~eA~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~al~~l~~~y~~~~~~~~a~~~~~~~~~ 83 (434)
T 4b4t_Q 5 GSKLEEARRLVNEKQYNEAEQVYLSLLDKD-SSQSSAAAGASVDDKRRNEQETSILELGQLYVTMGAKDKLREFIPHSTE 83 (434)
T ss_dssp THHHHHHHHHHHHTCHHHHHHHHHHHHHSC-CCSSSBSSSSSBCSHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHTHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHhhC-cccchhHHHHHHHHHHhhhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 456788999999999999999999999998 541 22345789999999999999999999999999
Q ss_pred hCCCCHH------HHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC------ccHHHHHHHHHHHHHHHHHHHH
Q psy4703 76 IVPDDPK------ALFRRCQAYEAIGKFEEAYTDAKHIHRVEPTN------KAIQPVLSRLFAIVTKRMQENE 136 (401)
Q Consensus 76 ldP~~~k------A~~~~a~a~~~lg~~eeA~~~~~kal~l~P~~------~~~~~~L~~l~~~~~~~~~a~~ 136 (401)
+.+...+ .+..+|.++...|++++|+..+++++.+.+.. ..+...++.++...++..++..
T Consensus 84 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~ 156 (434)
T 4b4t_Q 84 YMMQFAKSKTVKVLKTLIEKFEQVPDSLDDQIFVCEKSIEFAKREKRVFLKHSLSIKLATLHYQKKQYKDSLA 156 (434)
T ss_dssp HHHTSCHHHHHHHHHHHHHHHCSCCSCHHHHHHHHHHHHHHHHHSSCCSSHHHHHHHHHHHHHHHTCHHHHHH
T ss_pred HHHHccchHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHccChHHHHH
Confidence 8765433 34557888888999999999999999875532 3456678888888888766655
No 208
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=98.37 E-value=5.3e-06 Score=78.82 Aligned_cols=110 Identities=9% Similarity=0.034 Sum_probs=95.9
Q ss_pred cCChhHHHHHHHHHHHHHH-----cCC------HHHHHHHHHHHHhhcCCCCcchHHHHHHHHHHHHHc-----CCHHHH
Q psy4703 3 DNNMNDYNKLKESGNSAFK-----QGD------YETALDFYTKALKVTAEESHERATCLKNRAAVYLKQ-----NQNDKV 66 (401)
Q Consensus 3 ~~~p~~a~~l~~~Gn~~~~-----~g~------y~eAi~~y~~Al~l~~p~~~~~~~~~~n~a~~y~kl-----g~y~~A 66 (401)
+.+|++++.++..|..... .|+ ...|...+++|++++ |+ -.+..+|..+|..|.+. |+.++|
T Consensus 146 ~~~~~dve~L~W~ai~~ss~a~~~~gg~~Al~~l~~A~a~lerAleLD-P~-~~~GsA~~~LG~lY~~vPp~~gGd~ekA 223 (301)
T 3u64_A 146 RCTRVDVGTLYWVGTGYVAAFALTPLGSALPDTVHAAVMMLERACDLW-PS-YQEGAVWNVLTKFYAAAPESFGGGMEKA 223 (301)
T ss_dssp TCCGGGHHHHHHHHHHHHHHHTTSCTTSCCHHHHHHHHHHHHHHHHHC-TT-HHHHHHHHHHHHHHHHSCTTTTCCHHHH
T ss_pred HcCccccHHHHHHHHHHHHHHhcCCCChHHHHhHHHHHHHHHHHHHhC-CC-cccCHHHHHHHHHHHhCCCccCCCHHHH
Confidence 4578889999888877643 243 477888999999999 76 44678999999999996 999999
Q ss_pred HHHHHHHHHhCCCC-HHHHHHHHHHHHH-cCCHHHHHHHHHHHHhhCCCC
Q psy4703 67 IEDCSKSLEIVPDD-PKALFRRCQAYEA-IGKFEEAYTDAKHIHRVEPTN 114 (401)
Q Consensus 67 i~~~~kAL~ldP~~-~kA~~~~a~a~~~-lg~~eeA~~~~~kal~l~P~~ 114 (401)
..+|++||+++|+. ...++.+|..+.. .|++++|...+++++..+|..
T Consensus 224 ~~~ferAL~LnP~~~id~~v~YA~~l~~~~gd~~~a~~~L~kAL~a~p~~ 273 (301)
T 3u64_A 224 HTAFEHLTRYCSAHDPDHHITYADALCIPLNNRAGFDEALDRALAIDPES 273 (301)
T ss_dssp HHHHHHHHHHCCTTCSHHHHHHHHHTTTTTTCHHHHHHHHHHHHHCCGGG
T ss_pred HHHHHHHHHhCCCCCchHHHHHHHHHHHhcCCHHHHHHHHHHHHcCCCCC
Confidence 99999999999975 9999999999988 599999999999999999874
No 209
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.36 E-value=1.5e-06 Score=68.56 Aligned_cols=73 Identities=11% Similarity=0.035 Sum_probs=67.5
Q ss_pred ChhHHHHHHHHHHHHHHcCC---HHHHHHHHHHHHhhcCCCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH
Q psy4703 5 NMNDYNKLKESGNSAFKQGD---YETALDFYTKALKVTAEESHERATCLKNRAAVYLKQNQNDKVIEDCSKSLEIVPDDP 81 (401)
Q Consensus 5 ~p~~a~~l~~~Gn~~~~~g~---y~eAi~~y~~Al~l~~p~~~~~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~ldP~~~ 81 (401)
+|++++.+...|..++..++ .++|...+.++++++ |+ +..+++.+|..+++.|+|++|+..++++++.+|.++
T Consensus 2 ~p~~~~~~~~~a~al~~~~~~~~~~~A~~~l~~AL~~d-p~---~~rA~~~lg~~~~~~g~y~~Ai~~w~~~l~~~p~~~ 77 (93)
T 3bee_A 2 NAVTATQLAAKATTLYYLHKQAMTDEVSLLLEQALQLE-PY---NEAALSLIANDHFISFRFQEAIDTWVLLLDSNDPNL 77 (93)
T ss_dssp CCCCHHHHHHHHHHHHHTTTTCCCHHHHHHHHHHHHHC-TT---CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTCCCTTC
T ss_pred CCCCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHC-cC---CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCc
Confidence 68899999999999986666 799999999999999 77 899999999999999999999999999999999843
No 210
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=98.35 E-value=1.1e-05 Score=90.74 Aligned_cols=93 Identities=20% Similarity=0.238 Sum_probs=78.9
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHhhcC-------------------CCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q psy4703 15 SGNSAFKQGDYETALDFYTKALKVTA-------------------EESHERATCLKNRAAVYLKQNQNDKVIEDCSKSLE 75 (401)
Q Consensus 15 ~Gn~~~~~g~y~eAi~~y~~Al~l~~-------------------p~~~~~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~ 75 (401)
.|..+...|.|++|+..|+++-.... + +...+.+|+++|.++...|++++|+..|.+|
T Consensus 1055 IA~Iai~lglyEEAf~IYkKa~~~~~A~~VLie~i~nldrAiE~Ae-rvn~p~vWsqLAKAql~~G~~kEAIdsYiKA-- 1131 (1630)
T 1xi4_A 1055 IANIAISNELFEEAFAIFRKFDVNTSAVQVLIEHIGNLDRAYEFAE-RCNEPAVWSQLAKAQLQKGMVKEAIDSYIKA-- 1131 (1630)
T ss_pred HHHHHHhCCCHHHHHHHHHHcCCHHHHHHHHHHHHhhHHHHHHHHH-hcCCHHHHHHHHHHHHhCCCHHHHHHHHHhc--
Confidence 38888999999999888866532110 1 2447889999999999999999999999886
Q ss_pred hCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC
Q psy4703 76 IVPDDPKALFRRCQAYEAIGKFEEAYTDAKHIHRVEPT 113 (401)
Q Consensus 76 ldP~~~kA~~~~a~a~~~lg~~eeA~~~~~kal~l~P~ 113 (401)
+++.+|++.|.++.++|+|++|+++|+.+.+.++.
T Consensus 1132 ---dD~say~eVa~~~~~lGkyEEAIeyL~mArk~~~e 1166 (1630)
T 1xi4_A 1132 ---DDPSSYMEVVQAANTSGNWEELVKYLQMARKKARE 1166 (1630)
T ss_pred ---CChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhccc
Confidence 88999999999999999999999999999998854
No 211
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=98.25 E-value=9.1e-06 Score=67.71 Aligned_cols=101 Identities=12% Similarity=0.061 Sum_probs=85.4
Q ss_pred CHHHHHHHHHHHHhhcCCCCcchHHHHHHHHHHHHHcCCHHH---HHHHHHHHHHhC-C-CCHHHHHHHHHHHHHcCCHH
Q psy4703 24 DYETALDFYTKALKVTAEESHERATCLKNRAAVYLKQNQNDK---VIEDCSKSLEIV-P-DDPKALFRRCQAYEAIGKFE 98 (401)
Q Consensus 24 ~y~eAi~~y~~Al~l~~p~~~~~~~~~~n~a~~y~klg~y~~---Ai~~~~kAL~ld-P-~~~kA~~~~a~a~~~lg~~e 98 (401)
....+...|.+.+..+ +. .....++.|.++.+..+... +|..++..+..+ | ..-..+|.+|..++++|+|+
T Consensus 16 ~l~~~~~~y~~e~~~~-~~---s~~~~F~yAw~Lv~S~~~~d~~~GI~lLe~l~~~~~p~~~Rd~lY~LAvg~yklg~Y~ 91 (126)
T 1nzn_A 16 DLLKFEKKFQSEKAAG-SV---SKSTQFEYAWCLVRTRYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYE 91 (126)
T ss_dssp HHHHHHHHHHHHHHHS-CC---CHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHhccC-CC---cHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHhhhHH
Confidence 4456677788888877 43 78899999999999887777 999999999987 5 56789999999999999999
Q ss_pred HHHHHHHHHHhhCCCCccHHHHHHHHHHHH
Q psy4703 99 EAYTDAKHIHRVEPTNKAIQPVLSRLFAIV 128 (401)
Q Consensus 99 eA~~~~~kal~l~P~~~~~~~~L~~l~~~~ 128 (401)
.|..+++.+|+++|+|.++......+...+
T Consensus 92 ~A~~~~~~lL~~eP~n~QA~~Lk~~i~~~i 121 (126)
T 1nzn_A 92 KALKYVRGLLQTEPQNNQAKELERLIDKAM 121 (126)
T ss_dssp HHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCHHHHHHHHHHHHHH
Confidence 999999999999999999888766555443
No 212
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=98.20 E-value=6.4e-06 Score=70.96 Aligned_cols=84 Identities=11% Similarity=0.036 Sum_probs=72.8
Q ss_pred CChhHHHHHHHHHHHHHHcC---CHHHHHHHHHHHHhhcCCCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Q psy4703 4 NNMNDYNKLKESGNSAFKQG---DYETALDFYTKALKVTAEESHERATCLKNRAAVYLKQNQNDKVIEDCSKSLEIVPDD 80 (401)
Q Consensus 4 ~~p~~a~~l~~~Gn~~~~~g---~y~eAi~~y~~Al~l~~p~~~~~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~ldP~~ 80 (401)
.++.+.+..++.|+.+.+.+ +.++++..++..++.+.| ..+..+++++|..|+++|+|++|..+++.+|+++|+|
T Consensus 27 ~~~~~~~~~F~ya~~Lv~S~~~~~~~~gI~lLe~ll~~~~p--~~~rd~lY~LAv~~~kl~~Y~~A~~y~~~lL~ieP~n 104 (152)
T 1pc2_A 27 AGSVSKSTQFEYAWCLVRSKYNDDIRKGIVLLEELLPKGSK--EEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQTEPQN 104 (152)
T ss_dssp TTCCCHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSCH--HHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCTTC
T ss_pred cCCCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCc--cchHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCC
Confidence 35667899999999999988 777999999999998723 1378999999999999999999999999999999999
Q ss_pred HHHHHHHHH
Q psy4703 81 PKALFRRCQ 89 (401)
Q Consensus 81 ~kA~~~~a~ 89 (401)
..|..-+-.
T Consensus 105 ~QA~~Lk~~ 113 (152)
T 1pc2_A 105 NQAKELERL 113 (152)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 988765443
No 213
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=98.16 E-value=2.1e-05 Score=75.74 Aligned_cols=120 Identities=11% Similarity=-0.005 Sum_probs=93.7
Q ss_pred hHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcCCCC-cchHHHHHHHH--HHHHHcC--CHHHHHHHHHHHHHhCCC--
Q psy4703 7 NDYNKLKESGNSAFKQGDYETALDFYTKALKVTAEES-HERATCLKNRA--AVYLKQN--QNDKVIEDCSKSLEIVPD-- 79 (401)
Q Consensus 7 ~~a~~l~~~Gn~~~~~g~y~eAi~~y~~Al~l~~p~~-~~~~~~~~n~a--~~y~klg--~y~~Ai~~~~kAL~ldP~-- 79 (401)
...+.+...+..+++.|+.+.|...+++..+.+ |+. .-.-.+..+++ .+.+..| ++.+|...|+++.+..|+
T Consensus 134 ~~lea~~l~vqi~L~~~r~d~A~k~l~~~~~~~-~d~~~~~d~~l~~Laea~v~l~~g~~~~q~A~~~f~El~~~~p~~~ 212 (310)
T 3mv2_B 134 GTTELLLLAIEVALLNNNVSTASTIFDNYTNAI-EDTVSGDNEMILNLAESYIKFATNKETATSNFYYYEELSQTFPTWK 212 (310)
T ss_dssp THHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS-CHHHHHHHHHHHHHHHHHHHHHHTCSTTTHHHHHHHHHHTTSCSHH
T ss_pred CcHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcC-ccccccchHHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhCCCcc
Confidence 788888899999999999999999999999988 510 00123344454 4466666 999999999999888886
Q ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh----------CCCCccHHHHHHHHHHHHHH
Q psy4703 80 DPKALFRRCQAYEAIGKFEEAYTDAKHIHRV----------EPTNKAIQPVLSRLFAIVTK 130 (401)
Q Consensus 80 ~~kA~~~~a~a~~~lg~~eeA~~~~~kal~l----------~P~~~~~~~~L~~l~~~~~~ 130 (401)
....+++ +++.+|+|++|...++.+++. +|+|+.+..++..+...+++
T Consensus 213 ~~~lLln---~~~~~g~~~eAe~~L~~l~~~~p~~~~k~~~~p~~~~~LaN~i~l~~~lgk 270 (310)
T 3mv2_B 213 TQLGLLN---LHLQQRNIAEAQGIVELLLSDYYSVEQKENAVLYKPTFLANQITLALMQGL 270 (310)
T ss_dssp HHHHHHH---HHHHHTCHHHHHHHHHHHHSHHHHTTTCHHHHSSHHHHHHHHHHHHHHTTC
T ss_pred cHHHHHH---HHHHcCCHHHHHHHHHHHHHhcccccccccCCCCCHHHHHHHHHHHHHhCh
Confidence 3445555 899999999999999988877 58888888777666666654
No 214
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=98.04 E-value=1e-05 Score=81.48 Aligned_cols=90 Identities=12% Similarity=0.103 Sum_probs=76.6
Q ss_pred CChhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcC----CCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh---
Q psy4703 4 NNMNDYNKLKESGNSAFKQGDYETALDFYTKALKVTA----EESHERATCLKNRAAVYLKQNQNDKVIEDCSKSLEI--- 76 (401)
Q Consensus 4 ~~p~~a~~l~~~Gn~~~~~g~y~eAi~~y~~Al~l~~----p~~~~~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~l--- 76 (401)
.+|..+..+.+.|..|..+|+|++|+.+|.+++.+.. |++|..+..++|+|.+|..+|+|++|+..+.+|+++
T Consensus 324 ~h~~~~~~~~~L~~~y~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~l~nLa~~~~~~g~~~eA~~~~~~Al~i~~~ 403 (429)
T 3qwp_A 324 INIYQLKVLDCAMDACINLGLLEEALFYGTRTMEPYRIFFPGSHPVRGVQVMKVGKLQLHQGMFPQAMKNLRLAFDIMRV 403 (429)
T ss_dssp TSHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhHHHHcCCCChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHH
Confidence 5778899999999999999999999999999997642 778999999999999999999999999999999987
Q ss_pred --CCCCHH---HHHHHHHHHHH
Q psy4703 77 --VPDDPK---ALFRRCQAYEA 93 (401)
Q Consensus 77 --dP~~~k---A~~~~a~a~~~ 93 (401)
.|+++. .+.+++.++..
T Consensus 404 ~lG~~Hp~~~~~~~~l~~~~~e 425 (429)
T 3qwp_A 404 THGREHSLIEDLILLLEECDAN 425 (429)
T ss_dssp HTCTTSHHHHHHHHHHHHHHHH
T ss_pred hcCCCChHHHHHHHHHHHHHHH
Confidence 466654 34555555543
No 215
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=98.03 E-value=1.3e-05 Score=80.81 Aligned_cols=79 Identities=18% Similarity=0.173 Sum_probs=71.6
Q ss_pred CChhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcC----CCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh---
Q psy4703 4 NNMNDYNKLKESGNSAFKQGDYETALDFYTKALKVTA----EESHERATCLKNRAAVYLKQNQNDKVIEDCSKSLEI--- 76 (401)
Q Consensus 4 ~~p~~a~~l~~~Gn~~~~~g~y~eAi~~y~~Al~l~~----p~~~~~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~l--- 76 (401)
.+|..+..+.+.|..|..+|+|++|+.+|++++++.. |++|..+..+.|+|.+|..+|+|++|+..|++|+++
T Consensus 335 ~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa~~~~~qg~~~eA~~~~~~Al~i~~~ 414 (433)
T 3qww_A 335 SNVYMLHMMYQAMGVCLYMQDWEGALKYGQKIIKPYSKHYPVYSLNVASMWLKLGRLYMGLENKAAGEKALKKAIAIMEV 414 (433)
T ss_dssp TSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred hchHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHH
Confidence 5788899999999999999999999999999998642 778999999999999999999999999999999987
Q ss_pred --CCCCHH
Q psy4703 77 --VPDDPK 82 (401)
Q Consensus 77 --dP~~~k 82 (401)
.|+++.
T Consensus 415 ~lG~~Hp~ 422 (433)
T 3qww_A 415 AHGKDHPY 422 (433)
T ss_dssp HTCTTCHH
T ss_pred HcCCCChH
Confidence 477764
No 216
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=97.90 E-value=8.3e-05 Score=64.64 Aligned_cols=115 Identities=10% Similarity=0.138 Sum_probs=90.0
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhhcC--CC---CcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC---C--
Q psy4703 10 NKLKESGNSAFKQGDYETALDFYTKALKVTA--EE---SHERATCLKNRAAVYLKQNQNDKVIEDCSKSLEIVP---D-- 79 (401)
Q Consensus 10 ~~l~~~Gn~~~~~g~y~eAi~~y~~Al~l~~--p~---~~~~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~ldP---~-- 79 (401)
..+++....++..|.|+.|+..+..++.+.. |+ ....+.++..+|.+++..++|..|...|.+||.... .
T Consensus 21 ~~l~dqik~L~d~~LY~sA~~La~lLlSl~~~~~~~~sp~~~~~~l~~ladalf~~~eyrrA~~~y~qALq~~k~l~k~~ 100 (167)
T 3ffl_A 21 MNVIDHVRDMAAAGLHSNVRLLSSLLLTLSNNNPELFSPPQKYQLLVYHADSLFHDKEYRNAVSKYTMALQQKKALSKTS 100 (167)
T ss_dssp CCHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHCC----
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHhhcCCcccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHhcCC
Confidence 3578899999999999999999999877752 22 124567889999999999999999999999976531 1
Q ss_pred --------------------CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCccHHHHHHHHH
Q psy4703 80 --------------------DPKALFRRCQAYEAIGKFEEAYTDAKHIHRVEPTNKAIQPVLSRLF 125 (401)
Q Consensus 80 --------------------~~kA~~~~a~a~~~lg~~eeA~~~~~kal~l~P~~~~~~~~L~~l~ 125 (401)
+.+..|+.|.||.+++++++|+..++.+- ..-..+.+...|++++
T Consensus 101 s~~~~~~~~ss~p~s~~~~~e~Elkykia~C~~~l~~~~~Ai~~Le~Ip-~k~Rt~kvnm~LakLy 165 (167)
T 3ffl_A 101 KVRPSTGNSASTPQSQCLPSEIEVKYKLAECYTVLKQDKDAIAILDGIP-SRQRTPKINMLLANLY 165 (167)
T ss_dssp ----------------CCCCHHHHHHHHHHHHHHTTCHHHHHHHHHTSC-GGGCCHHHHHHHHHHC
T ss_pred CccccccccCCCcccccccchHHHHHHHHHHHHHHCCHHHHHHHHhcCC-chhcCHHHHHHHHHHh
Confidence 12678999999999999999999876531 1224566777777765
No 217
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=97.89 E-value=0.00032 Score=70.63 Aligned_cols=106 Identities=15% Similarity=0.235 Sum_probs=69.9
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhhcCCCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-----------
Q psy4703 10 NKLKESGNSAFKQGDYETALDFYTKALKVTAEESHERATCLKNRAAVYLKQNQNDKVIEDCSKSLEIVP----------- 78 (401)
Q Consensus 10 ~~l~~~Gn~~~~~g~y~eAi~~y~~Al~l~~p~~~~~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~ldP----------- 78 (401)
.++...|..++..|+|++|..+|+++ ..|..+|.|+.++|+|++|++.|.++. +|
T Consensus 123 ~a~~~IGd~~~~~g~yeeA~~~Y~~a------------~n~~~LA~~L~~Lg~yq~AVea~~KA~--~~~~Wk~v~~aCv 188 (449)
T 1b89_A 123 AHIQQVGDRCYDEKMYDAAKLLYNNV------------SNFGRLASTLVHLGEYQAAVDGARKAN--STRTWKEVCFACV 188 (449)
T ss_dssp --------------CTTTHHHHHHHT------------TCHHHHHHHHHTTTCHHHHHHHHHHHT--CHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHh------------hhHHHHHHHHHHhccHHHHHHHHHHcC--CchhHHHHHHHHH
Confidence 37788888888888888888888854 146678888888888888888888772 22
Q ss_pred ----------------CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCccHHHHHHHHHHHHH
Q psy4703 79 ----------------DDPKALFRRCQAYEAIGKFEEAYTDAKHIHRVEPTNKAIQPVLSRLFAIVT 129 (401)
Q Consensus 79 ----------------~~~kA~~~~a~a~~~lg~~eeA~~~~~kal~l~P~~~~~~~~L~~l~~~~~ 129 (401)
.++.-+..+...|.+.|+|++|+..+++++.+++.+..+...|+.++...+
T Consensus 189 ~~~ef~lA~~~~l~L~~~ad~l~~lv~~Yek~G~~eEai~lLe~aL~le~ah~~~ftel~il~~ky~ 255 (449)
T 1b89_A 189 DGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTELAILYSKFK 255 (449)
T ss_dssp HTTCHHHHHHTTTTTTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSTTCCHHHHHHHHHHHHTTC
T ss_pred HcCcHHHHHHHHHHHHhCHhhHHHHHHHHHHCCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHhcC
Confidence 122223344578999999999999999999999999999999987776543
No 218
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=97.83 E-value=8.1e-05 Score=74.96 Aligned_cols=100 Identities=8% Similarity=-0.024 Sum_probs=55.2
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcCCCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHH
Q psy4703 9 YNKLKESGNSAFKQGDYETALDFYTKALKVTAEESHERATCLKNRAAVYLKQNQNDKVIEDCSKSLEIVPDDPKALFRRC 88 (401)
Q Consensus 9 a~~l~~~Gn~~~~~g~y~eAi~~y~~Al~l~~p~~~~~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~ldP~~~kA~~~~a 88 (401)
+......+..+.+.|++.++..+|+ . |+ ...|.++|.+++..|.|++|..+|+++ ..|.++|
T Consensus 94 ~~i~~~Li~~Y~Klg~l~e~e~f~~-----~-pn----~~a~~~IGd~~~~~g~yeeA~~~Y~~a--------~n~~~LA 155 (449)
T 1b89_A 94 SYVETELIFALAKTNRLAELEEFIN-----G-PN----NAHIQQVGDRCYDEKMYDAAKLLYNNV--------SNFGRLA 155 (449)
T ss_dssp ---------------CHHHHTTTTT-----C-C--------------------CTTTHHHHHHHT--------TCHHHHH
T ss_pred chhHHHHHHHHHHhCCHHHHHHHHc-----C-Cc----HHHHHHHHHHHHHcCCHHHHHHHHHHh--------hhHHHHH
Confidence 4556678889999999999988885 2 43 459999999999999999999999987 4688999
Q ss_pred HHHHHcCCHHHHHHHHHHHHhhCCCCccHHHHHHHHHHHHHHH
Q psy4703 89 QAYEAIGKFEEAYTDAKHIHRVEPTNKAIQPVLSRLFAIVTKR 131 (401)
Q Consensus 89 ~a~~~lg~~eeA~~~~~kal~l~P~~~~~~~~L~~l~~~~~~~ 131 (401)
.++.++|+|++|++.|+++ +++..+.....+....++.
T Consensus 156 ~~L~~Lg~yq~AVea~~KA-----~~~~~Wk~v~~aCv~~~ef 193 (449)
T 1b89_A 156 STLVHLGEYQAAVDGARKA-----NSTRTWKEVCFACVDGKEF 193 (449)
T ss_dssp HHHHTTTCHHHHHHHHHHH-----TCHHHHHHHHHHHHHTTCH
T ss_pred HHHHHhccHHHHHHHHHHc-----CCchhHHHHHHHHHHcCcH
Confidence 9999999999999999999 3555555554555544433
No 219
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=97.72 E-value=0.00034 Score=58.55 Aligned_cols=84 Identities=12% Similarity=0.064 Sum_probs=72.8
Q ss_pred hHHHHHHHHHHHHHcCC---HHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCccHHHHH
Q psy4703 46 RATCLKNRAAVYLKQNQ---NDKVIEDCSKSLEIVPD-DPKALFRRCQAYEAIGKFEEAYTDAKHIHRVEPTNKAIQPVL 121 (401)
Q Consensus 46 ~~~~~~n~a~~y~klg~---y~~Ai~~~~kAL~ldP~-~~kA~~~~a~a~~~lg~~eeA~~~~~kal~l~P~~~~~~~~L 121 (401)
.....++.|.|+.+..+ ..++|..++..+..+|. .-..+|.+|.++.++|+|++|.++.+.+++++|+|.++....
T Consensus 39 s~qt~F~yAw~Lv~S~~~~d~~~GI~LLe~l~~~~~~~~Rd~LYyLAvg~yklgdY~~Ar~y~d~lL~~eP~N~QA~~Lk 118 (134)
T 3o48_A 39 TIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGALK 118 (134)
T ss_dssp CHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCTTCHHHHHHH
T ss_pred ChhhHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhCCCCHHHHHHH
Confidence 57888999999998775 45799999999999984 578999999999999999999999999999999999998877
Q ss_pred HHHHHHHH
Q psy4703 122 SRLFAIVT 129 (401)
Q Consensus 122 ~~l~~~~~ 129 (401)
..+...+.
T Consensus 119 ~~Ie~ki~ 126 (134)
T 3o48_A 119 SMVEDKIQ 126 (134)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 66655544
No 220
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=97.67 E-value=0.00049 Score=58.28 Aligned_cols=82 Identities=12% Similarity=0.041 Sum_probs=71.1
Q ss_pred hHHHHHHHHHHHHHcCCH---HHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCccHHHHH
Q psy4703 46 RATCLKNRAAVYLKQNQN---DKVIEDCSKSLEIVPD-DPKALFRRCQAYEAIGKFEEAYTDAKHIHRVEPTNKAIQPVL 121 (401)
Q Consensus 46 ~~~~~~n~a~~y~klg~y---~~Ai~~~~kAL~ldP~-~~kA~~~~a~a~~~lg~~eeA~~~~~kal~l~P~~~~~~~~L 121 (401)
.....++.|.|+.+..+. .+++..++..+..+|. .-..+|.+|..+.++|+|++|.++.+.+|+++|+|.++....
T Consensus 38 s~~t~F~YAw~Lv~S~~~~di~~GI~LLe~l~~~~~~~~RdcLYyLAvg~ykl~~Y~~Ar~y~d~lL~~eP~n~QA~~Lk 117 (144)
T 1y8m_A 38 TIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGALK 117 (144)
T ss_dssp CHHHHHHHHHHHHHSSSHHHHHHHHHHHHHHHHHCCSTHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHTCCCCHHHHHHH
T ss_pred cHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCccchhHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCcHHHHHHH
Confidence 678889999999987754 5799999999999984 567899999999999999999999999999999999988766
Q ss_pred HHHHHH
Q psy4703 122 SRLFAI 127 (401)
Q Consensus 122 ~~l~~~ 127 (401)
..+...
T Consensus 118 ~~Ie~~ 123 (144)
T 1y8m_A 118 SMVEDK 123 (144)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 555443
No 221
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=97.50 E-value=0.00085 Score=63.68 Aligned_cols=103 Identities=13% Similarity=0.120 Sum_probs=79.8
Q ss_pred cchHHHHHHHHHHHHH---c--C------CHHHHHHHHHHHHHhCCC--CHHHHHHHHHHHHHc-----CCHHHHHHHHH
Q psy4703 44 HERATCLKNRAAVYLK---Q--N------QNDKVIEDCSKSLEIVPD--DPKALFRRCQAYEAI-----GKFEEAYTDAK 105 (401)
Q Consensus 44 ~~~~~~~~n~a~~y~k---l--g------~y~~Ai~~~~kAL~ldP~--~~kA~~~~a~a~~~l-----g~~eeA~~~~~ 105 (401)
+.+..+++-.|..... . | ...+|....++|+++||+ +..+|..+|..|... |+.+.|..+|+
T Consensus 149 ~~dve~L~W~ai~~ss~a~~~~gg~~Al~~l~~A~a~lerAleLDP~~~~GsA~~~LG~lY~~vPp~~gGd~ekA~~~fe 228 (301)
T 3u64_A 149 RVDVGTLYWVGTGYVAAFALTPLGSALPDTVHAAVMMLERACDLWPSYQEGAVWNVLTKFYAAAPESFGGGMEKAHTAFE 228 (301)
T ss_dssp GGGHHHHHHHHHHHHHHHTTSCTTSCCHHHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHHSCTTTTCCHHHHHHHHH
T ss_pred ccccHHHHHHHHHHHHHHhcCCCChHHHHhHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHhCCCccCCCHHHHHHHHH
Confidence 4467777777776644 2 2 367899999999999999 567999999999996 99999999999
Q ss_pred HHHhhCCCC-ccHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHhhcCCC
Q psy4703 106 HIHRVEPTN-KAIQPVLSRLFAIV-TKRMQENEQLQNKVHNMFKYVFDTSA 154 (401)
Q Consensus 106 kal~l~P~~-~~~~~~L~~l~~~~-~~~~~a~~~~~~~~~~~~~~~~~~~~ 154 (401)
+|++++|+. ..+...+++.+... ++... ...++++++..++
T Consensus 229 rAL~LnP~~~id~~v~YA~~l~~~~gd~~~--------a~~~L~kAL~a~p 271 (301)
T 3u64_A 229 HLTRYCSAHDPDHHITYADALCIPLNNRAG--------FDEALDRALAIDP 271 (301)
T ss_dssp HHHHHCCTTCSHHHHHHHHHTTTTTTCHHH--------HHHHHHHHHHCCG
T ss_pred HHHHhCCCCCchHHHHHHHHHHHhcCCHHH--------HHHHHHHHHcCCC
Confidence 999999975 88888888876553 54433 3346777777443
No 222
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=97.39 E-value=0.0022 Score=68.14 Aligned_cols=140 Identities=8% Similarity=-0.072 Sum_probs=78.2
Q ss_pred ChhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcC----------CCC--------cchHHHHHHHHHHHHHcCCHHHH
Q psy4703 5 NMNDYNKLKESGNSAFKQGDYETALDFYTKALKVTA----------EES--------HERATCLKNRAAVYLKQNQNDKV 66 (401)
Q Consensus 5 ~p~~a~~l~~~Gn~~~~~g~y~eAi~~y~~Al~l~~----------p~~--------~~~~~~~~n~a~~y~klg~y~~A 66 (401)
.|.+...+...+......|+++.|...|++++...+ |.. .....+|...+....+.|..+.|
T Consensus 374 ~P~s~~Lwl~~a~~ee~~~~~e~aR~iyek~l~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~vWi~y~~~erR~~~l~~A 453 (679)
T 4e6h_A 374 IPNSAVLAFSLSEQYELNTKIPEIETTILSCIDRIHLDLAALMEDDPTNESAINQLKSKLTYVYCVYMNTMKRIQGLAAS 453 (679)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHH
T ss_pred CCCCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhhhhhhccCcchhhhhhhccchHHHHHHHHHHHHHcCCHHHH
Confidence 344444555555555666666666666666665420 110 01233555555555566666666
Q ss_pred HHHHHHHHHh-CCCCHHHHHHHHHHHHHcCC-HHHHHHHHHHHHhhCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy4703 67 IEDCSKSLEI-VPDDPKALFRRCQAYEAIGK-FEEAYTDAKHIHRVEPTNKAIQPVLSRLFAIVTKRMQENEQLQNKVHN 144 (401)
Q Consensus 67 i~~~~kAL~l-dP~~~kA~~~~a~a~~~lg~-~eeA~~~~~kal~l~P~~~~~~~~L~~l~~~~~~~~~a~~~~~~~~~~ 144 (401)
...|.+|++. .+.....|...|..-...++ ++.|...|+++++..|+++..+..+..+....++. .++..
T Consensus 454 R~vf~~A~~~~~~~~~~lyi~~A~lE~~~~~d~e~Ar~ife~~Lk~~p~~~~~w~~y~~fe~~~~~~--------~~AR~ 525 (679)
T 4e6h_A 454 RKIFGKCRRLKKLVTPDIYLENAYIEYHISKDTKTACKVLELGLKYFATDGEYINKYLDFLIYVNEE--------SQVKS 525 (679)
T ss_dssp HHHHHHHHHTGGGSCTHHHHHHHHHHHTTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTCH--------HHHHH
T ss_pred HHHHHHHHHhcCCCChHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHCCCchHHHHHHHHHHHhCCCH--------HHHHH
Confidence 6666666665 33344555555554444443 67777777777777777666665555544443332 34555
Q ss_pred HHHHhhcC
Q psy4703 145 MFKYVFDT 152 (401)
Q Consensus 145 ~~~~~~~~ 152 (401)
.|+++...
T Consensus 526 lferal~~ 533 (679)
T 4e6h_A 526 LFESSIDK 533 (679)
T ss_dssp HHHHHTTT
T ss_pred HHHHHHHh
Confidence 77777763
No 223
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=97.39 E-value=0.00091 Score=71.09 Aligned_cols=80 Identities=18% Similarity=0.085 Sum_probs=50.2
Q ss_pred HHHHHHHHHHhhcCCCCcchHHHHHHHHHHHHHcCCHHHHH-HHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHH
Q psy4703 27 TALDFYTKALKVTAEESHERATCLKNRAAVYLKQNQNDKVI-EDCSKSLEIVPDDPKALFRRCQAYEAIGKFEEAYTDAK 105 (401)
Q Consensus 27 eAi~~y~~Al~l~~p~~~~~~~~~~n~a~~y~klg~y~~Ai-~~~~kAL~ldP~~~kA~~~~a~a~~~lg~~eeA~~~~~ 105 (401)
.....|++|+... |. .+.+|+..|..+...|+.++|. ..+++|+..+|.+...++..+......|+++.|...|+
T Consensus 327 Rv~~~Ye~aL~~~-p~---~~~lW~~ya~~~~~~~~~~~a~r~il~rAi~~~P~s~~Lwl~~a~~ee~~~~~e~aR~iye 402 (679)
T 4e6h_A 327 RMTYVYMQAAQHV-CF---APEIWFNMANYQGEKNTDSTVITKYLKLGQQCIPNSAVLAFSLSEQYELNTKIPEIETTIL 402 (679)
T ss_dssp HHHHHHHHHHHHT-TT---CHHHHHHHHHHHHHHSCCTTHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHc-CC---CHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 3445566666666 44 5666666666666666666665 66666666666666666666666666666666666666
Q ss_pred HHHhh
Q psy4703 106 HIHRV 110 (401)
Q Consensus 106 kal~l 110 (401)
+++..
T Consensus 403 k~l~~ 407 (679)
T 4e6h_A 403 SCIDR 407 (679)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 66653
No 224
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=97.38 E-value=0.0011 Score=54.96 Aligned_cols=82 Identities=10% Similarity=0.012 Sum_probs=69.2
Q ss_pred hhHHHHHHHHHHHHHHcCCHHH---HHHHHHHHHhhcCCCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH
Q psy4703 6 MNDYNKLKESGNSAFKQGDYET---ALDFYTKALKVTAEESHERATCLKNRAAVYLKQNQNDKVIEDCSKSLEIVPDDPK 82 (401)
Q Consensus 6 p~~a~~l~~~Gn~~~~~g~y~e---Ai~~y~~Al~l~~p~~~~~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~ldP~~~k 82 (401)
+.+.+..++.|+.+.+..+..+ +|..++..+..+.| ...-.+++.+|..|+++|+|.+|..+++..|+++|+|..
T Consensus 32 ~~s~~~~F~yAw~Lv~S~~~~d~~~GI~lLe~l~~~~~p--~~~Rd~lY~LAvg~yklg~Y~~A~~~~~~lL~~eP~n~Q 109 (126)
T 1nzn_A 32 SVSKSTQFEYAWCLVRTRYNDDIRKGIVLLEELLPKGSK--EEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQTEPQNNQ 109 (126)
T ss_dssp CCCHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHTTTSCH--HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH
T ss_pred CCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCc--chHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCCCCHH
Confidence 4567788999999999988877 99999988886522 147788999999999999999999999999999999988
Q ss_pred HHHHHHH
Q psy4703 83 ALFRRCQ 89 (401)
Q Consensus 83 A~~~~a~ 89 (401)
|.--+..
T Consensus 110 A~~Lk~~ 116 (126)
T 1nzn_A 110 AKELERL 116 (126)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 8655443
No 225
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=97.35 E-value=0.00085 Score=65.90 Aligned_cols=71 Identities=13% Similarity=0.108 Sum_probs=65.8
Q ss_pred chHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCcc
Q psy4703 45 ERATCLKNRAAVYLKQNQNDKVIEDCSKSLEIVPDDPKALFRRCQAYEAIGKFEEAYTDAKHIHRVEPTNKA 116 (401)
Q Consensus 45 ~~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~ldP~~~kA~~~~a~a~~~lg~~eeA~~~~~kal~l~P~~~~ 116 (401)
..+.+|.-+|..++..|++++|+..+++|+.++| ++.+|..+|.++.-.|++++|+..|++|+.++|..+.
T Consensus 275 ~~a~~~~alal~~l~~gd~d~A~~~l~rAl~Ln~-s~~a~~llG~~~~~~G~~~eA~e~~~~AlrL~P~~~t 345 (372)
T 3ly7_A 275 NLSIIYQIKAVSALVKGKTDESYQAINTGIDLEM-SWLNYVLLGKVYEMKGMNREAADAYLTAFNLRPGANT 345 (372)
T ss_dssp TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCSHHH
T ss_pred cCHHHHHHHHHHHHhCCCHHHHHHHHHHHHhcCC-CHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcCh
Confidence 3888999999999999999999999999999997 5788999999999999999999999999999998753
No 226
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=97.35 E-value=0.0028 Score=54.11 Aligned_cols=116 Identities=8% Similarity=-0.102 Sum_probs=95.8
Q ss_pred cCChhHHHHHHHHHHHHHHcCCH------HHHHHHHHHHHhhcCCCC----cchHHHHHHHHHHHHHcCCHHHHHHHHHH
Q psy4703 3 DNNMNDYNKLKESGNSAFKQGDY------ETALDFYTKALKVTAEES----HERATCLKNRAAVYLKQNQNDKVIEDCSK 72 (401)
Q Consensus 3 ~~~p~~a~~l~~~Gn~~~~~g~y------~eAi~~y~~Al~l~~p~~----~~~~~~~~n~a~~y~klg~y~~Ai~~~~k 72 (401)
-..|++.+.|..-....-+.|+. +.-++.|++|+..-||+. .-...+|.+.| .+...++.++|.+.|+.
T Consensus 7 ~~~p~~yd~W~~yl~llE~~g~p~~d~~l~rlrd~YerAia~~Pp~k~~~wrrYI~LWIrYA-~~~ei~D~d~aR~vy~~ 85 (161)
T 4h7y_A 7 MMMANNPEDWLSLLLKLEKNSVPLSDALLNKLIGRYSQAIEALPPDKYGQNESFARIQVRFA-ELKAIQEPDDARDYFQM 85 (161)
T ss_dssp ---CCSHHHHHHHHHHHHHHTCSCCHHHHHHHHHHHHHHHHHSCGGGGTTCHHHHHHHHHHH-HHHHHHCGGGCHHHHHH
T ss_pred eeCCCCHHHHHHHHHHHHHcCCCchhhHHHHHHHHHHHHHHcCCccccccHHHHHHHHHHHH-HHHHhcCHHHHHHHHHH
Confidence 35688888888888888888998 899999999999985531 22445556555 44678999999999999
Q ss_pred HHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCccHHH
Q psy4703 73 SLEIVPDDPKALFRRCQAYEAIGKFEEAYTDAKHIHRVEPTNKAIQP 119 (401)
Q Consensus 73 AL~ldP~~~kA~~~~a~a~~~lg~~eeA~~~~~kal~l~P~~~~~~~ 119 (401)
++.+...+++.|...|+.-...|+...|.+.+.+++.+.|...+..+
T Consensus 86 a~~~hKkFAKiwi~~AqFEiRqgnl~kARkILg~AiG~~~k~~~~le 132 (161)
T 4h7y_A 86 ARANCKKFAFVHISFAQFELSQGNVKKSKQLLQKAVERGAVPLEMLE 132 (161)
T ss_dssp HHHHCTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCBCHHHHH
T ss_pred HHHHhHHHHHHHHHHHHHHHHcccHHHHHHHHHHHhccCCCcHHHHH
Confidence 99999999999999999999999999999999999999998755544
No 227
>4db8_A Armadillo-repeat protein; solenoid repeat, de novo protein; 2.50A {Synthetic construct}
Probab=97.20 E-value=0.0062 Score=55.14 Aligned_cols=174 Identities=23% Similarity=0.275 Sum_probs=115.0
Q ss_pred ChhHHHHHHHHH-HHhhhcchhhHHHhhhhHHHHHHHHhhccCchhHHhhH-----------HHHHHHH-HHhcHHHHHH
Q psy4703 155 PMDKRVTAVNNL-VVLAREMSGAEMLLKSGVAKQINTLLKCETNEEIYLGE-----------EDFITSI-IKQGVDILKR 221 (401)
Q Consensus 155 ~~~~~~~a~~~L-~~l~~~~~gae~~~~e~~v~~L~~ll~~~~~~e~~lA~-----------e~fi~~i-~~~gv~~Lk~ 221 (401)
+.+.+..+...+ ....+.+.....+...+++..+..+++ +.++++...- ++....+ ..++++.|-.
T Consensus 25 ~~~~~~~a~~~L~~~l~~~~~~~~~~~~~g~i~~L~~lL~-~~~~~v~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~L~~ 103 (252)
T 4db8_A 25 DMQEQLSATRKFSQILSDGNEQIQAVIDAGALPALVQLLS-SPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQ 103 (252)
T ss_dssp CSSHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHGGG-CSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHcCCCchHHHHHHcCcHHHHHHHHc-CCCHHHHHHHHHHHHHHhcCCHHHHHHHHHcCCHHHHHH
Confidence 344555566665 233334445566667788999999998 5566664321 1222333 3457999999
Q ss_pred HHcCCChhHHHHHHHhhhhccccCCCCCCCCCCCCCchHHHHHHHHhhhcCCCCCchhHHhHHhhhhhccC-CHHHHHhh
Q psy4703 222 LYMSKNENIRVRALVGLCKLGSMGGSDASIRPFADGSTRKLAEACRRFLVNPARDPDIRRWAAEGLAYLTL-DAEVKEAL 300 (401)
Q Consensus 222 l~~s~~d~i~~ralvgLckl~~~gg~d~~~~~~~~~s~~~l~~~~~~~l~~~~~~~~~~~~~~eglay~~~-~~~vke~~ 300 (401)
+++++++.++..|+..|+.+.... +.....+.+ .......-++|.. .+++.+..|+..|..++. +++.++.+
T Consensus 104 lL~~~~~~v~~~a~~~L~~l~~~~--~~~~~~~~~---~~~i~~L~~lL~~--~~~~v~~~a~~~L~~l~~~~~~~~~~~ 176 (252)
T 4db8_A 104 LLSSPNEQILQEALWALSNIASGG--NEQIQAVID---AGALPALVQLLSS--PNEQILQEALWALSNIASGGNEQIQAV 176 (252)
T ss_dssp GGGCSCHHHHHHHHHHHHHHTTSC--HHHHHHHHH---TTHHHHHHHGGGC--SCHHHHHHHHHHHHHHTTSCHHHHHHH
T ss_pred HHcCCCHHHHHHHHHHHHHhhcCC--chHHHHHHH---CCCHHHHHHHHhC--CCHHHHHHHHHHHHHHHcCChHHHHHH
Confidence 999999999998888888886421 100000000 0123344455533 377889999999999997 56666665
Q ss_pred cCCHHHHHHHHHHHhcCCCCcchhhhhhhHHhhcccCCc
Q psy4703 301 IEDKPALAALVDVASSVKYKNVWNGTQSDALKDVDKAFD 339 (401)
Q Consensus 301 ~~d~~~l~~l~~~~~~~~~~~~~~~~~~~~~~n~~~~~~ 339 (401)
++ ...+..|++++++. +..+...++ .++.||+...|
T Consensus 177 ~~-~~~i~~L~~ll~~~-~~~v~~~a~-~~L~~l~~~~~ 212 (252)
T 4db8_A 177 ID-AGALPALVQLLSSP-NEQILQEAL-WALSNIASGGN 212 (252)
T ss_dssp HH-TTCHHHHHHGGGCS-SHHHHHHHH-HHHHHHTTSCH
T ss_pred HH-CCCHHHHHHHHCCC-CHHHHHHHH-HHHHHHhcCCH
Confidence 53 57899999999887 777888888 99999996665
No 228
>4hxt_A De novo protein OR329; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.95A {Artificial gene}
Probab=97.15 E-value=0.0032 Score=56.64 Aligned_cols=173 Identities=21% Similarity=0.321 Sum_probs=118.4
Q ss_pred ChhHHHHHHHHHHHhhhcch-hhHHHhhhhHHHHHHHHhhccCchhHHhhH-----------HHHHHHH-HHhcHHHHHH
Q psy4703 155 PMDKRVTAVNNLVVLAREMS-GAEMLLKSGVAKQINTLLKCETNEEIYLGE-----------EDFITSI-IKQGVDILKR 221 (401)
Q Consensus 155 ~~~~~~~a~~~L~~l~~~~~-gae~~~~e~~v~~L~~ll~~~~~~e~~lA~-----------e~fi~~i-~~~gv~~Lk~ 221 (401)
+.+.+..+...+..+..... ....+...+++..+..+++ +.++++...- ......+ ..++++.|-.
T Consensus 15 ~~~~~~~a~~~L~~l~~~~~~~~~~~~~~g~i~~L~~ll~-~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~l~~ 93 (252)
T 4hxt_A 15 DSETQKEAARDLAEIASGPASAIKAIVDAGGVEVLVKLLT-STDSEVQKEAARALANIASGPDEAIKAIVDAGGVEVLVK 93 (252)
T ss_dssp CHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHTT-CSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhcCCcHHHHHHHHCCCHHHHHHHHh-CCCHHHHHHHHHHHHHHHcCChHHHHHHHHCCCHHHHHH
Confidence 36667777777777665544 4566667788999999998 5566653321 1222333 3456999999
Q ss_pred HHcCCChhHHHHHHHhhhhccccCCCCCCCCC-CCCCchHHHHHHHHhhhcCCCCCchhHHhHHhhhhhccC-CHHHHHh
Q psy4703 222 LYMSKNENIRVRALVGLCKLGSMGGSDASIRP-FADGSTRKLAEACRRFLVNPARDPDIRRWAAEGLAYLTL-DAEVKEA 299 (401)
Q Consensus 222 l~~s~~d~i~~ralvgLckl~~~gg~d~~~~~-~~~~s~~~l~~~~~~~l~~~~~~~~~~~~~~eglay~~~-~~~vke~ 299 (401)
+++++++.++..|+..|+.+.... +..... ...|. ....-+++. ..+++.+.+|+..|+.++. .++.++.
T Consensus 94 ll~~~~~~v~~~a~~~L~~l~~~~--~~~~~~~~~~~~----i~~L~~~l~--~~~~~~~~~a~~~L~~l~~~~~~~~~~ 165 (252)
T 4hxt_A 94 LLTSTDSEVQKEAARALANIASGP--DEAIKAIVDAGG----VEVLVKLLT--STDSEVQKEAARALANIASGPDEAIKA 165 (252)
T ss_dssp HTTCSSHHHHHHHHHHHHHHTTSC--HHHHHHHHHTTH----HHHHHHHTT--CSCHHHHHHHHHHHHHHTTSCHHHHHH
T ss_pred HHcCCCHHHHHHHHHHHHHHHcCC--HHHHHHHHHCCC----HHHHHHHHc--CCCHHHHHHHHHHHHHHHcCCHHHHHH
Confidence 999999999998888888887421 111100 01122 222333443 3457899999999999997 5666666
Q ss_pred hcCCHHHHHHHHHHHhcCCCCcchhhhhhhHHhhcccCCc
Q psy4703 300 LIEDKPALAALVDVASSVKYKNVWNGTQSDALKDVDKAFD 339 (401)
Q Consensus 300 ~~~d~~~l~~l~~~~~~~~~~~~~~~~~~~~~~n~~~~~~ 339 (401)
+++ ...+..|++++++. +..+...++ .++.||+...|
T Consensus 166 ~~~-~~~i~~L~~ll~~~-~~~v~~~a~-~~L~~l~~~~~ 202 (252)
T 4hxt_A 166 IVD-AGGVEVLVKLLTST-DSEVQKEAA-RALANIASGPT 202 (252)
T ss_dssp HHH-TTHHHHHHHHTTCS-CHHHHHHHH-HHHHHHTTSBH
T ss_pred HHH-CcCHHHHHHHHCCC-CHHHHHHHH-HHHHHHHcCCH
Confidence 664 67999999999977 778888888 99999997655
No 229
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=97.06 E-value=0.007 Score=50.54 Aligned_cols=80 Identities=13% Similarity=0.053 Sum_probs=67.7
Q ss_pred HHHHHHHHHHHHHHcCCH---HHHHHHHHHHHhhcCCCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHH
Q psy4703 8 DYNKLKESGNSAFKQGDY---ETALDFYTKALKVTAEESHERATCLKNRAAVYLKQNQNDKVIEDCSKSLEIVPDDPKAL 84 (401)
Q Consensus 8 ~a~~l~~~Gn~~~~~g~y---~eAi~~y~~Al~l~~p~~~~~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~ldP~~~kA~ 84 (401)
+++..++.++.+.+..+. ..+|..++..++.. |. ..-..++.+|..++++|+|.+|..+++.+|++.|+|..|.
T Consensus 39 s~qt~F~yAw~Lv~S~~~~d~~~GI~LLe~l~~~~-~~--~~Rd~LYyLAvg~yklgdY~~Ar~y~d~lL~~eP~N~QA~ 115 (134)
T 3o48_A 39 TIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEA-ES--RRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVG 115 (134)
T ss_dssp CHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHC-GG--GHHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCTTCHHHH
T ss_pred ChhhHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcC-cc--hhHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhCCCCHHHH
Confidence 467888999999988765 46999999999888 63 3678899999999999999999999999999999998886
Q ss_pred HHHHHH
Q psy4703 85 FRRCQA 90 (401)
Q Consensus 85 ~~~a~a 90 (401)
--+..+
T Consensus 116 ~Lk~~I 121 (134)
T 3o48_A 116 ALKSMV 121 (134)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 555433
No 230
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=96.99 E-value=0.0082 Score=50.75 Aligned_cols=80 Identities=13% Similarity=0.055 Sum_probs=67.9
Q ss_pred hhHHHHHHHHHHHHHHcCCHH---HHHHHHHHHHhhcCCCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH
Q psy4703 6 MNDYNKLKESGNSAFKQGDYE---TALDFYTKALKVTAEESHERATCLKNRAAVYLKQNQNDKVIEDCSKSLEIVPDDPK 82 (401)
Q Consensus 6 p~~a~~l~~~Gn~~~~~g~y~---eAi~~y~~Al~l~~p~~~~~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~ldP~~~k 82 (401)
.-+.+..++.++.+.+..+.. ++|..++..+... |. ..-..++.+|..|+++|+|.+|..+++..|+++|+|..
T Consensus 36 ~vs~~t~F~YAw~Lv~S~~~~di~~GI~LLe~l~~~~-~~--~~RdcLYyLAvg~ykl~~Y~~Ar~y~d~lL~~eP~n~Q 112 (144)
T 1y8m_A 36 TATIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEA-ES--RRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQ 112 (144)
T ss_dssp TSCHHHHHHHHHHHHHSSSHHHHHHHHHHHHHHHHHC-CS--THHHHHHHHHHHHHTTTCHHHHHHHHHHHHHTCCCCHH
T ss_pred CCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcC-cc--chhHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCcHH
Confidence 346778899999999988665 5999999999977 63 37788899999999999999999999999999999988
Q ss_pred HHHHHH
Q psy4703 83 ALFRRC 88 (401)
Q Consensus 83 A~~~~a 88 (401)
|.--+.
T Consensus 113 A~~Lk~ 118 (144)
T 1y8m_A 113 VGALKS 118 (144)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 765443
No 231
>4db6_A Armadillo repeat protein; solenoid repeat, armadillo repeat motif, de novo protein; 1.80A {Synthetic construct} PDB: 4db9_A 4dba_A
Probab=96.93 E-value=0.0041 Score=54.80 Aligned_cols=172 Identities=23% Similarity=0.273 Sum_probs=117.4
Q ss_pred CCChhHHHHHHHHHHHhhhc-chhhHHHhhhhHHHHHHHHhhccCchhHHhhH-----------HHHHHHH-HHhcHHHH
Q psy4703 153 SAPMDKRVTAVNNLVVLARE-MSGAEMLLKSGVAKQINTLLKCETNEEIYLGE-----------EDFITSI-IKQGVDIL 219 (401)
Q Consensus 153 ~~~~~~~~~a~~~L~~l~~~-~~gae~~~~e~~v~~L~~ll~~~~~~e~~lA~-----------e~fi~~i-~~~gv~~L 219 (401)
..+.+.+..+...|..+... +.....+...+++..+..+++ +.++++...- +.....+ ..++++.|
T Consensus 23 s~~~~v~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~L~~lL~-~~~~~v~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~L 101 (210)
T 4db6_A 23 SPDQQELQSALRKLSQIASGGNEQIQAVIDAGALPALVQLLS-SPNEQILQEALWALSNIASGGNEQIQAVIDAGALPAL 101 (210)
T ss_dssp CSCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHTT-CSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTCHHHH
T ss_pred CCCHHHHHHHHHHHHHHHcCCHHHHHHHHHcCCHHHHHHHHc-CCCHHHHHHHHHHHHHHhcCCcHHHHHHHHCCCHHHH
Confidence 45667777888888777743 444566667788999999998 5566664321 1222333 34679999
Q ss_pred HHHHcCCChhHHHHHHHhhhhccccCCCCCCCCC-CCCCchHHHHHHHHhhhcCCCCCchhHHhHHhhhhhccCC-HHHH
Q psy4703 220 KRLYMSKNENIRVRALVGLCKLGSMGGSDASIRP-FADGSTRKLAEACRRFLVNPARDPDIRRWAAEGLAYLTLD-AEVK 297 (401)
Q Consensus 220 k~l~~s~~d~i~~ralvgLckl~~~gg~d~~~~~-~~~~s~~~l~~~~~~~l~~~~~~~~~~~~~~eglay~~~~-~~vk 297 (401)
-.+++++++.++..|+..|+.+.... +..... ...| +....-++|.. .+++.+.+|+..|..++.. ++.+
T Consensus 102 ~~lL~~~~~~v~~~a~~~L~~l~~~~--~~~~~~~~~~~----~i~~L~~ll~~--~~~~v~~~a~~aL~~l~~~~~~~~ 173 (210)
T 4db6_A 102 VQLLSSPNEQILQEALWALSNIASGG--NEQIQAVIDAG----ALPALVQLLSS--PNEQILQEALWALSNIASGGNEQK 173 (210)
T ss_dssp HHHTTCSCHHHHHHHHHHHHHHTTSC--HHHHHHHHHTT----HHHHHHHHTTC--SCHHHHHHHHHHHHHHHTSCHHHH
T ss_pred HHHHcCCcHHHHHHHHHHHHHHHcCC--HHHHHHHHHcC----cHHHHHHHHcC--CCHHHHHHHHHHHHHHHcCCcHHH
Confidence 99999999999999999998887521 111000 0112 22223333432 3778999999999999987 8888
Q ss_pred HhhcCCHHHHHHHHHHHhcCCCCcchhhhhhhHHhhccc
Q psy4703 298 EALIEDKPALAALVDVASSVKYKNVWNGTQSDALKDVDK 336 (401)
Q Consensus 298 e~~~~d~~~l~~l~~~~~~~~~~~~~~~~~~~~~~n~~~ 336 (401)
+.+++. ..+..|++++.+. +..+..-++ .++.||+.
T Consensus 174 ~~~~~~-g~i~~L~~ll~~~-~~~v~~~a~-~aL~~l~~ 209 (210)
T 4db6_A 174 QAVKEA-GALEKLEQLQSHE-NEKIQKEAQ-EALEKLQS 209 (210)
T ss_dssp HHHHHT-THHHHHHHGGGCS-CHHHHHHHH-HHHHHHCC
T ss_pred HHHHHC-CCHHHHHHHHhCC-CHHHHHHHH-HHHHHHhc
Confidence 777654 6889999999876 667777777 88888864
No 232
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=96.85 E-value=0.014 Score=57.52 Aligned_cols=100 Identities=15% Similarity=0.129 Sum_probs=70.3
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcCCC------------------CcchHHHHHHHHHHHHHcCCHHHHHHH
Q psy4703 8 DYNKLKESGNSAFKQGDYETALDFYTKALKVTAEE------------------SHERATCLKNRAAVYLKQNQNDKVIED 69 (401)
Q Consensus 8 ~a~~l~~~Gn~~~~~g~y~eAi~~y~~Al~l~~p~------------------~~~~~~~~~n~a~~y~klg~y~~Ai~~ 69 (401)
..+.+...|......|+.+.|+..+.+|+.+.... ......+...++.+++..|++.+|+..
T Consensus 114 ~f~~l~~~~~~~~~~~~~~~a~~~l~~Al~L~rG~~L~~~~~~~w~~~~r~~l~~~~~~a~~~~~~~~l~~g~~~~a~~~ 193 (388)
T 2ff4_A 114 RFVAEKTAGVHAAAAGRFEQASRHLSAALREWRGPVLDDLRDFQFVEPFATALVEDKVLAHTAKAEAEIACGRASAVIAE 193 (388)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSSTTGGGTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
Confidence 34556667777788899999999999999987311 011223344456666677777777777
Q ss_pred HHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHH
Q psy4703 70 CSKSLEIVPDDPKALFRRCQAYEAIGKFEEAYTDAKHI 107 (401)
Q Consensus 70 ~~kAL~ldP~~~kA~~~~a~a~~~lg~~eeA~~~~~ka 107 (401)
+..++..+|-+-.+|..+-.+|...|+..+|+..|+++
T Consensus 194 l~~~~~~~P~~E~~~~~lm~al~~~Gr~~~Al~~y~~~ 231 (388)
T 2ff4_A 194 LEALTFEHPYREPLWTQLITAYYLSDRQSDALGAYRRV 231 (388)
T ss_dssp HHHHHHHSTTCHHHHHHHHHHHHTTTCHHHHHHHHHHH
T ss_pred HHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 77777777777777777777777777777777777664
No 233
>1xqr_A HSPBP1 protein; armadillo repeat, superhelical twist, chaperone; 2.10A {Homo sapiens} SCOP: a.118.1.21 PDB: 1xqs_A*
Probab=96.85 E-value=0.0062 Score=57.98 Aligned_cols=171 Identities=18% Similarity=0.140 Sum_probs=115.6
Q ss_pred hHHHHHHHHHHHhhhcchhhHHHhhhhHHHHHHH-HhhccCchhHHhhH----HHH------H-HHH-HHhcHHHHHHHH
Q psy4703 157 DKRVTAVNNLVVLAREMSGAEMLLKSGVAKQINT-LLKCETNEEIYLGE----EDF------I-TSI-IKQGVDILKRLY 223 (401)
Q Consensus 157 ~~~~~a~~~L~~l~~~~~gae~~~~e~~v~~L~~-ll~~~~~~e~~lA~----e~f------i-~~i-~~~gv~~Lk~l~ 223 (401)
+.+..++..|..+.+...-+..+...|++..+.. +++ +.++++...- ... . ..+ ..+|++.|-+++
T Consensus 55 e~k~~Al~~L~~lv~~~dna~~~~~~G~l~~Lv~~lL~-s~~~~vr~~Aa~~Lg~ia~~n~~~~~~vv~~g~l~~Ll~LL 133 (296)
T 1xqr_A 55 QEREGALELLADLCENMDNAADFCQLSGMHLLVGRYLE-AGAAGLRWRAAQLIGTCSQNVAAIQEQVLGLGALRKLLRLL 133 (296)
T ss_dssp HHHHHHHHHHHHHHTSHHHHHHHHHTTHHHHHHHTTTT-CSSHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhChhhHHHHHHcCCHHHHHHHHHc-CCCHHHHHHHHHHHHHHHhCCHHHHHHHHHCCCHHHHHHHH
Confidence 4566677777766665444555556788888888 887 6666664321 111 1 223 446799999999
Q ss_pred cC-CChhHHHHHHHhhhhccccCCCCCCCCCCCC-CchHHHHHHHHhhhcCCCCCchhHHhHHhhhhhccC-CHHHHHhh
Q psy4703 224 MS-KNENIRVRALVGLCKLGSMGGSDASIRPFAD-GSTRKLAEACRRFLVNPARDPDIRRWAAEGLAYLTL-DAEVKEAL 300 (401)
Q Consensus 224 ~s-~~d~i~~ralvgLckl~~~gg~d~~~~~~~~-~s~~~l~~~~~~~l~~~~~~~~~~~~~~eglay~~~-~~~vke~~ 300 (401)
++ .+..++..|+..|+.+... .+...+.|.+ |-. ..+-++|-. .++..+++|+--|+|++- +++.++.+
T Consensus 134 ~~~~~~~v~~~A~~ALsnl~~~--~~~~~~~~~~~ggi----~~L~~lL~~--~d~~v~~~A~~aLs~L~~~~~~~~~~v 205 (296)
T 1xqr_A 134 DRDACDTVRVKALFAISCLVRE--QEAGLLQFLRLDGF----SVLMRAMQQ--QVQKLKVKSAFLLQNLLVGHPEHKGTL 205 (296)
T ss_dssp HHCSCHHHHHHHHHHHHHHHTT--CHHHHHHHHHTTHH----HHHHHHHHS--SCHHHHHHHHHHHHHHHHHCGGGHHHH
T ss_pred ccCCCHHHHHHHHHHHHHHHcC--CcHHHHHHHHCCCH----HHHHHHHcC--CCHHHHHHHHHHHHHHHhCChHHHHHH
Confidence 85 4778888888888776542 2221212221 222 233333332 478899999999999864 68888888
Q ss_pred cCCHHHHHHHHHHHhcCCCCcchhhhhhhHHhhcccCCc
Q psy4703 301 IEDKPALAALVDVASSVKYKNVWNGTQSDALKDVDKAFD 339 (401)
Q Consensus 301 ~~d~~~l~~l~~~~~~~~~~~~~~~~~~~~~~n~~~~~~ 339 (401)
++ ..+++.|++++++. +..+.--++ .+|.||....+
T Consensus 206 v~-~g~i~~Lv~LL~~~-d~~v~~~al-~aL~~l~~~~~ 241 (296)
T 1xqr_A 206 CS-MGMVQQLVALVRTE-HSPFHEHVL-GALCSLVTDFP 241 (296)
T ss_dssp HH-TTHHHHHHHHHTSC-CSTHHHHHH-HHHHHHHTTCH
T ss_pred HH-cCCHHHHHHHHcCC-ChhHHHHHH-HHHHHHHhCCh
Confidence 75 47899999999987 788888888 99999988866
No 234
>4db8_A Armadillo-repeat protein; solenoid repeat, de novo protein; 2.50A {Synthetic construct}
Probab=96.75 E-value=0.059 Score=48.49 Aligned_cols=171 Identities=23% Similarity=0.245 Sum_probs=115.3
Q ss_pred CChhHHHHHHHHHHHhhhc-chhhHHHhhhhHHHHHHHHhhccCchhHHhhH-----------HHHHHHH-HHhcHHHHH
Q psy4703 154 APMDKRVTAVNNLVVLARE-MSGAEMLLKSGVAKQINTLLKCETNEEIYLGE-----------EDFITSI-IKQGVDILK 220 (401)
Q Consensus 154 ~~~~~~~~a~~~L~~l~~~-~~gae~~~~e~~v~~L~~ll~~~~~~e~~lA~-----------e~fi~~i-~~~gv~~Lk 220 (401)
.+.+.+..+...|..+... +.....+...+++..+..+++ +.++++...- +.-+..+ ..++++.|-
T Consensus 66 ~~~~v~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~L~~lL~-~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~ 144 (252)
T 4db8_A 66 PNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLS-SPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALV 144 (252)
T ss_dssp SCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHGGG-CSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHH
T ss_pred CCHHHHHHHHHHHHHHhcCCHHHHHHHHHcCCHHHHHHHHc-CCCHHHHHHHHHHHHHhhcCCchHHHHHHHCCCHHHHH
Confidence 3466777777777777753 444566667788999999998 5566664321 1111223 446799999
Q ss_pred HHHcCCChhHHHHHHHhhhhccccCCCCCCCCCC-CCCchHHHHHHHHhhhcCCCCCchhHHhHHhhhhhcc-CCHHHHH
Q psy4703 221 RLYMSKNENIRVRALVGLCKLGSMGGSDASIRPF-ADGSTRKLAEACRRFLVNPARDPDIRRWAAEGLAYLT-LDAEVKE 298 (401)
Q Consensus 221 ~l~~s~~d~i~~ralvgLckl~~~gg~d~~~~~~-~~~s~~~l~~~~~~~l~~~~~~~~~~~~~~eglay~~-~~~~vke 298 (401)
++++++++.++..|+..|+.+.... +.....+ ..|-. ...-++|.. .+++.+..|+..|+.++ -+++.++
T Consensus 145 ~lL~~~~~~v~~~a~~~L~~l~~~~--~~~~~~~~~~~~i----~~L~~ll~~--~~~~v~~~a~~~L~~l~~~~~~~~~ 216 (252)
T 4db8_A 145 QLLSSPNEQILQEALWALSNIASGG--NEQIQAVIDAGAL----PALVQLLSS--PNEQILQEALWALSNIASGGNEQKQ 216 (252)
T ss_dssp HGGGCSCHHHHHHHHHHHHHHTTSC--HHHHHHHHHTTCH----HHHHHGGGC--SSHHHHHHHHHHHHHHTTSCHHHHH
T ss_pred HHHhCCCHHHHHHHHHHHHHHHcCC--hHHHHHHHHCCCH----HHHHHHHCC--CCHHHHHHHHHHHHHHhcCCHHHHH
Confidence 9999889999998888888887532 1110000 01222 222334433 37789999999999987 5788887
Q ss_pred hhcCCHHHHHHHHHHHhcCCCCcchhhhhhhHHhhccc
Q psy4703 299 ALIEDKPALAALVDVASSVKYKNVWNGTQSDALKDVDK 336 (401)
Q Consensus 299 ~~~~d~~~l~~l~~~~~~~~~~~~~~~~~~~~~~n~~~ 336 (401)
.+++ ...+..|++++.+. +..+.--++ .++.||+.
T Consensus 217 ~~~~-~g~i~~L~~ll~~~-~~~v~~~A~-~~L~~l~~ 251 (252)
T 4db8_A 217 AVKE-AGALEKLEQLQSHE-NEKIQKEAQ-EALEKLQS 251 (252)
T ss_dssp HHHH-TTHHHHHHTTTTCS-SSHHHHTHH-HHHHTTC-
T ss_pred HHHH-CCcHHHHHHHhCCC-CHHHHHHHH-HHHHHHhc
Confidence 7764 46889999999887 667777777 89999985
No 235
>4hxt_A De novo protein OR329; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.95A {Artificial gene}
Probab=96.67 E-value=0.0069 Score=54.42 Aligned_cols=174 Identities=20% Similarity=0.285 Sum_probs=119.7
Q ss_pred CChhHHHHHHHHHHHhhhc-chhhHHHhhhhHHHHHHHHhhccCchhHHhhH-----------HHHHHHH-HHhcHHHHH
Q psy4703 154 APMDKRVTAVNNLVVLARE-MSGAEMLLKSGVAKQINTLLKCETNEEIYLGE-----------EDFITSI-IKQGVDILK 220 (401)
Q Consensus 154 ~~~~~~~~a~~~L~~l~~~-~~gae~~~~e~~v~~L~~ll~~~~~~e~~lA~-----------e~fi~~i-~~~gv~~Lk 220 (401)
.+.+.+..+...|..+... ......+...+++..+..+++ +.++++...- ......+ ..++++.|-
T Consensus 56 ~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~l~~ll~-~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~ 134 (252)
T 4hxt_A 56 TDSEVQKEAARALANIASGPDEAIKAIVDAGGVEVLVKLLT-STDSEVQKEAARALANIASGPDEAIKAIVDAGGVEVLV 134 (252)
T ss_dssp SCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTT-CSSHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHcCChHHHHHHHHCCCHHHHHHHHc-CCCHHHHHHHHHHHHHHHcCCHHHHHHHHHCCCHHHHH
Confidence 4466777777888777766 445566667788999999998 6666664331 1222223 345699999
Q ss_pred HHHcCCChhHHHHHHHhhhhccccCCCCCCCCCCC-CCchHHHHHHHHhhhcCCCCCchhHHhHHhhhhhccC-CHHHHH
Q psy4703 221 RLYMSKNENIRVRALVGLCKLGSMGGSDASIRPFA-DGSTRKLAEACRRFLVNPARDPDIRRWAAEGLAYLTL-DAEVKE 298 (401)
Q Consensus 221 ~l~~s~~d~i~~ralvgLckl~~~gg~d~~~~~~~-~~s~~~l~~~~~~~l~~~~~~~~~~~~~~eglay~~~-~~~vke 298 (401)
+++++.++.++..++..|+.+.... +...+.+. .| .....-.++. ..+++.|..|+.-|.-++. +++.++
T Consensus 135 ~~l~~~~~~~~~~a~~~L~~l~~~~--~~~~~~~~~~~----~i~~L~~ll~--~~~~~v~~~a~~~L~~l~~~~~~~~~ 206 (252)
T 4hxt_A 135 KLLTSTDSEVQKEAARALANIASGP--DEAIKAIVDAG----GVEVLVKLLT--STDSEVQKEAARALANIASGPTSAIK 206 (252)
T ss_dssp HHTTCSCHHHHHHHHHHHHHHTTSC--HHHHHHHHHTT----HHHHHHHHTT--CSCHHHHHHHHHHHHHHTTSBHHHHH
T ss_pred HHHcCCCHHHHHHHHHHHHHHHcCC--HHHHHHHHHCc----CHHHHHHHHC--CCCHHHHHHHHHHHHHHHcCCHHHHH
Confidence 9999989999999998888887521 11100000 11 2233334443 3467899999999999987 777777
Q ss_pred hhcCCHHHHHHHHHHHhcCCCCcchhhhhhhHHhhcccCCc
Q psy4703 299 ALIEDKPALAALVDVASSVKYKNVWNGTQSDALKDVDKAFD 339 (401)
Q Consensus 299 ~~~~d~~~l~~l~~~~~~~~~~~~~~~~~~~~~~n~~~~~~ 339 (401)
.+++ ...+..|++++++. +..+..-++ .++.||+...+
T Consensus 207 ~l~~-~~~i~~L~~ll~~~-~~~v~~~a~-~~L~~l~~~~~ 244 (252)
T 4hxt_A 207 AIVD-AGGVEVLQKLLTST-DSEVQKEAQ-RALENIKSGGW 244 (252)
T ss_dssp HHHH-TTHHHHHHHGGGCS-CHHHHHHHH-HHHHHHHHTCB
T ss_pred HHHH-CCCHHHHHHHHCCC-cHHHHHHHH-HHHHHHHcCCC
Confidence 7764 56889999999877 677888888 89999986544
No 236
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=96.23 E-value=0.015 Score=50.37 Aligned_cols=83 Identities=20% Similarity=0.223 Sum_probs=62.5
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcC--CCC-------------------cchHHHHHHHHHHHHHcCCHHHH
Q psy4703 8 DYNKLKESGNSAFKQGDYETALDFYTKALKVTA--EES-------------------HERATCLKNRAAVYLKQNQNDKV 66 (401)
Q Consensus 8 ~a~~l~~~Gn~~~~~g~y~eAi~~y~~Al~l~~--p~~-------------------~~~~~~~~n~a~~y~klg~y~~A 66 (401)
.++.+...|+.+|..|+|..|...|++||++.. +.. +....+.+.+|.||.+++++++|
T Consensus 62 ~~~~l~~ladalf~~~eyrrA~~~y~qALq~~k~l~k~~s~~~~~~~~ss~p~s~~~~~e~Elkykia~C~~~l~~~~~A 141 (167)
T 3ffl_A 62 KYQLLVYHADSLFHDKEYRNAVSKYTMALQQKKALSKTSKVRPSTGNSASTPQSQCLPSEIEVKYKLAECYTVLKQDKDA 141 (167)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHCC--------------------CCCCHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHhcCCCccccccccCCCcccccccchHHHHHHHHHHHHHHCCHHHH
Confidence 467888999999999999999999999987653 111 11236889999999999999999
Q ss_pred HHHHHHHHHhCCCCHHHHHHHHHHH
Q psy4703 67 IEDCSKSLEIVPDDPKALFRRCQAY 91 (401)
Q Consensus 67 i~~~~kAL~ldP~~~kA~~~~a~a~ 91 (401)
+...+.+- ..-..++...-+|+.|
T Consensus 142 i~~Le~Ip-~k~Rt~kvnm~LakLy 165 (167)
T 3ffl_A 142 IAILDGIP-SRQRTPKINMLLANLY 165 (167)
T ss_dssp HHHHHTSC-GGGCCHHHHHHHHHHC
T ss_pred HHHHhcCC-chhcCHHHHHHHHHHh
Confidence 99865431 1224567777777654
No 237
>2z6h_A Catenin beta-1, beta-catenin; C-terminal domain, activator, alternative splicing, cell adhesion, cytoplasm, cytoskeleton, disease mutation, nucleus; 2.20A {Homo sapiens}
Probab=96.19 E-value=0.043 Score=57.31 Aligned_cols=176 Identities=15% Similarity=0.128 Sum_probs=114.5
Q ss_pred CCCChhHHHHHHHHHHHhhhcchhhHHHhhhhHHHHHHHHhhccCchhHHhh-H---HHH-------HHHH-HHhcHHHH
Q psy4703 152 TSAPMDKRVTAVNNLVVLAREMSGAEMLLKSGVAKQINTLLKCETNEEIYLG-E---EDF-------ITSI-IKQGVDIL 219 (401)
Q Consensus 152 ~~~~~~~~~~a~~~L~~l~~~~~gae~~~~e~~v~~L~~ll~~~~~~e~~lA-~---e~f-------i~~i-~~~gv~~L 219 (401)
...+.+.+..++..|..+.........+...+++..+..+++ +.++++... . .+. ...+ ...+++.|
T Consensus 67 ~~~~~~~~~~A~~~L~~Ls~~~~~~~~i~~~g~i~~Lv~lL~-~~~~~v~~~A~~aL~nL~~~~~~~~~~v~~~g~i~~L 145 (644)
T 2z6h_A 67 NTNDVETARCTAGTLHNLSHHREGLLAIFKSGGIPALVKMLG-SPVDSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKM 145 (644)
T ss_dssp SCCCHHHHHHHHHHHHHHTTSHHHHHHHHTTTHHHHHHHHTT-CSSHHHHHHHHHHHHHHHHHSTTHHHHHHHTTHHHHH
T ss_pred cCCCHHHHHHHHHHHHHHhcChhhHHHHHHcCCHHHHHHHHh-CCCHHHHHHHHHHHHHHHhCcchhHHHHHHCCChHHH
Confidence 344667777788888777776667777778888999999998 556665332 1 111 1223 35679999
Q ss_pred HHHHcCCChhHHHHHHHhhhhccccCCCCCCCC-CCCCCchHHHHHHHHhhhcCCCCCchhHHhHHhhhhhccCCHHHHH
Q psy4703 220 KRLYMSKNENIRVRALVGLCKLGSMGGSDASIR-PFADGSTRKLAEACRRFLVNPARDPDIRRWAAEGLAYLTLDAEVKE 298 (401)
Q Consensus 220 k~l~~s~~d~i~~ralvgLckl~~~gg~d~~~~-~~~~~s~~~l~~~~~~~l~~~~~~~~~~~~~~eglay~~~~~~vke 298 (401)
-+++++++..++..++-.|+.+... .+.... -...|..-.|.+.++. + .....+..++.-|..++..++.++
T Consensus 146 v~lL~~~~~~~~~~a~~~L~~La~~--~~~~~~~i~~~g~v~~Lv~lL~~----~-~~~~~~~~a~~~L~nLs~~~~~~~ 218 (644)
T 2z6h_A 146 VALLNKTNVKFLAITTDCLQILAYG--NQESKLIILASGGPQALVNIMRT----Y-TYEKLLWTTSRVLKVLSVCSSNKP 218 (644)
T ss_dssp HHGGGCCCHHHHHHHHHHHHHHHTT--CHHHHHHHHHTTHHHHHHHHHTT----C-CCHHHHHHHHHHHHHHTTCTTHHH
T ss_pred HHHHCcCCHHHHHHHHHHHHHHHhc--CcHHHHHHHHcCChHHHHHHHHc----C-ChHHHHHHHHHHHHHHhcCcccHH
Confidence 9999887776555444456666541 111110 1112434445554432 2 234556668889999999999999
Q ss_pred hhcCCHHHHHHHHHHHhcCCCCcchhhhhhhHHhhcccCC
Q psy4703 299 ALIEDKPALAALVDVASSVKYKNVWNGTQSDALKDVDKAF 338 (401)
Q Consensus 299 ~~~~d~~~l~~l~~~~~~~~~~~~~~~~~~~~~~n~~~~~ 338 (401)
.+++. ..+..|++++++. +..+...++ .+|.||+...
T Consensus 219 ~l~~~-g~l~~L~~ll~~~-~~~~~~~a~-~~L~nL~~~~ 255 (644)
T 2z6h_A 219 AIVEA-GGMQALGLHLTDP-SQRLVQNCL-WTLRNLSDAA 255 (644)
T ss_dssp HHHHT-THHHHHHTTTTCS-CHHHHHHHH-HHHHHHGGGC
T ss_pred HHHHC-CCHHHHHHHHhcC-CHHHHHHHH-HHHHHHhhcc
Confidence 98865 4788888888776 666777777 8888887654
No 238
>1jdh_A Beta-catenin; beta-catenin, protein-protein complex, transcription; 1.90A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qz7_A 1g3j_A 1th1_A* 1i7w_A* 1i7x_A 1jpp_A 1m1e_A 1v18_A* 3oux_A 3ouw_A 1jpw_A 3tx7_A* 2gl7_A 1t08_A 1luj_A 2bct_A 3bct_A* 3ifq_A* 3sla_A 3sl9_A
Probab=96.19 E-value=0.087 Score=52.79 Aligned_cols=174 Identities=16% Similarity=0.192 Sum_probs=107.0
Q ss_pred CCChhHHHHHHHHHHHhhhcchhhHHHhhhhHHHHHHHHhhccCchhHHhh-H---HHH-------HHHH-HHhcHHHHH
Q psy4703 153 SAPMDKRVTAVNNLVVLAREMSGAEMLLKSGVAKQINTLLKCETNEEIYLG-E---EDF-------ITSI-IKQGVDILK 220 (401)
Q Consensus 153 ~~~~~~~~~a~~~L~~l~~~~~gae~~~~e~~v~~L~~ll~~~~~~e~~lA-~---e~f-------i~~i-~~~gv~~Lk 220 (401)
..+.+.+..++..|..+...+.....+...+++..+..+++ +.++++... . .+. ...+ ..++++.|-
T Consensus 71 ~~~~~~~~~a~~~L~~ls~~~~~~~~i~~~g~i~~L~~lL~-~~~~~v~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~L~ 149 (529)
T 1jdh_A 71 TNDVETARCTAGTLHNLSHHREGLLAIFKSGGIPALVKMLG-SPVDSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMV 149 (529)
T ss_dssp CCCHHHHHHHHHHHHHHTTSHHHHHHHHHTTHHHHHHHHTT-CSCHHHHHHHHHHHHHHHHHCTTHHHHHHHHTHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHcCchhHHHHHHcCCHHHHHHHHc-CCCHHHHHHHHHHHHHHhcCCcchHHHHHHcCCHHHHH
Confidence 34566777777888777776666677777888999999988 666665332 1 111 1223 356789999
Q ss_pred HHHcCCChhHHHHHHHhhhhccccCCCCCCCCC-CCCCchHHHHHHHHhhhcCCCCCchhHHh-HHhhhhhccCCHHHHH
Q psy4703 221 RLYMSKNENIRVRALVGLCKLGSMGGSDASIRP-FADGSTRKLAEACRRFLVNPARDPDIRRW-AAEGLAYLTLDAEVKE 298 (401)
Q Consensus 221 ~l~~s~~d~i~~ralvgLckl~~~gg~d~~~~~-~~~~s~~~l~~~~~~~l~~~~~~~~~~~~-~~eglay~~~~~~vke 298 (401)
+++++++..++..+...|+.+.. +.+..... ...|..-.|.+.++.. +++.++| ++..|..++..++.++
T Consensus 150 ~ll~~~~~~~~~~~~~~L~~la~--~~~~~~~~i~~~~~i~~L~~ll~~~------~~~~~~~~a~~~L~~l~~~~~~~~ 221 (529)
T 1jdh_A 150 ALLNKTNVKFLAITTDCLQILAY--GNQESKLIILASGGPQALVNIMRTY------TYEKLLWTTSRVLKVLSVCSSNKP 221 (529)
T ss_dssp HGGGCCCHHHHHHHHHHHHHHHT--TCHHHHHHHHHTTHHHHHHHHHHHC------CCHHHHHHHHHHHHHHTTSTTHHH
T ss_pred HHHhcCCHHHHHHHHHHHHHHHh--CCHHHHHHHHHCCCHHHHHHHHHhC------ChHHHHHHHHHHHHHHhcCcccHH
Confidence 99988777776655556665543 11111111 1123344455544432 2344555 5667888889999998
Q ss_pred hhcCCHHHHHHHHHHHhcCCCCcchhhhhhhHHhhcccCC
Q psy4703 299 ALIEDKPALAALVDVASSVKYKNVWNGTQSDALKDVDKAF 338 (401)
Q Consensus 299 ~~~~d~~~l~~l~~~~~~~~~~~~~~~~~~~~~~n~~~~~ 338 (401)
.+++. ..+..|++++++. +..+...++ .++.||+...
T Consensus 222 ~~~~~-g~~~~L~~ll~~~-~~~~~~~a~-~~L~~l~~~~ 258 (529)
T 1jdh_A 222 AIVEA-GGMQALGLHLTDP-SQRLVQNCL-WTLRNLSDAA 258 (529)
T ss_dssp HHHHT-THHHHHHTTTTSS-CHHHHHHHH-HHHHHHHTTC
T ss_pred HHHHC-CCHHHHHHHHhCC-ChHHHHHHH-HHHHHHhcCC
Confidence 88754 4777777777665 445555556 6666666543
No 239
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=95.89 E-value=0.12 Score=52.47 Aligned_cols=116 Identities=8% Similarity=-0.095 Sum_probs=71.7
Q ss_pred ChhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcCCCCcc------------------------------------hHH
Q psy4703 5 NMNDYNKLKESGNSAFKQGDYETALDFYTKALKVTAEESHE------------------------------------RAT 48 (401)
Q Consensus 5 ~p~~a~~l~~~Gn~~~~~g~y~eAi~~y~~Al~l~~p~~~~------------------------------------~~~ 48 (401)
.|.....|...+..+...|+.+.|...|.+|+.. |..... ...
T Consensus 209 ~p~~~~lW~~ya~~~~~~~~~~~ar~i~erAi~~-P~~~~l~~~y~~~~e~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 287 (493)
T 2uy1_A 209 FYYAEEVYFFYSEYLIGIGQKEKAKKVVERGIEM-SDGMFLSLYYGLVMDEEAVYGDLKRKYSMGEAESAEKVFSKELDL 287 (493)
T ss_dssp TTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-CCSSHHHHHHHHHTTCTHHHHHHHHHTC----------CHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhC-CCcHHHHHHHHhhcchhHHHHHHHHHHHhhccchhhhhcccccHH
Confidence 4666777888888888889999999999999888 322100 012
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcC-CHHHHHHHHHHHHhhCCCCccHHHHHH
Q psy4703 49 CLKNRAAVYLKQNQNDKVIEDCSKSLEIVPDDPKALFRRCQAYEAIG-KFEEAYTDAKHIHRVEPTNKAIQPVLS 122 (401)
Q Consensus 49 ~~~n~a~~y~klg~y~~Ai~~~~kAL~ldP~~~kA~~~~a~a~~~lg-~~eeA~~~~~kal~l~P~~~~~~~~L~ 122 (401)
+|...+....+.++.+.|...|.+| ...+.....|...|..-...+ +++.|...|+.+++..|+++..+..+.
T Consensus 288 lw~~y~~~~~r~~~~~~AR~i~~~A-~~~~~~~~v~i~~A~lE~~~~~d~~~ar~ife~al~~~~~~~~~~~~yi 361 (493)
T 2uy1_A 288 LRINHLNYVLKKRGLELFRKLFIEL-GNEGVGPHVFIYCAFIEYYATGSRATPYNIFSSGLLKHPDSTLLKEEFF 361 (493)
T ss_dssp HHHHHHHHHHHHHCHHHHHHHHHHH-TTSCCCHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHh-hCCCCChHHHHHHHHHHHHHCCChHHHHHHHHHHHHHCCCCHHHHHHHH
Confidence 2333333334456677777777777 333334455555555555555 477777777777777776665544333
No 240
>3ltm_A Alpha-REP4; protein engineering, heat-like repeat, protein binding; HET: 1PE 12P; 2.15A {Synthetic}
Probab=95.66 E-value=0.3 Score=42.65 Aligned_cols=144 Identities=16% Similarity=0.105 Sum_probs=90.1
Q ss_pred CChhHHHHHHHHHHHhhhcchhhHHHhhhhHHHHHHHHhhccCchhHHhhHHHHHHHH-HHhcHHHHHHHHcCCChhHHH
Q psy4703 154 APMDKRVTAVNNLVVLAREMSGAEMLLKSGVAKQINTLLKCETNEEIYLGEEDFITSI-IKQGVDILKRLYMSKNENIRV 232 (401)
Q Consensus 154 ~~~~~~~~a~~~L~~l~~~~~gae~~~~e~~v~~L~~ll~~~~~~e~~lA~e~fi~~i-~~~gv~~Lk~l~~s~~d~i~~ 232 (401)
.+...+..+...|...+. ...+..+..+++ +.++.+..+--..+..+ ....++.|..+++..++.++.
T Consensus 62 ~~~~vr~~a~~aL~~~~~----------~~~~~~L~~~l~-~~~~~vr~~a~~aL~~~~~~~~~~~L~~~l~d~~~~vr~ 130 (211)
T 3ltm_A 62 EDAWVRRAAADALGQIGD----------ERAVEPLIKALK-DEDGWVRQSAAVALGQIGDERAVEPLIKALKDEDWFVRI 130 (211)
T ss_dssp SCHHHHHHHHHHHHHHCC----------GGGHHHHHHHTT-CSSHHHHHHHHHHHHHHCCGGGHHHHHHHTTCSSHHHHH
T ss_pred CCHHHHHHHHHHHHhhCC----------HHHHHHHHHHHc-CCCHHHHHHHHHHHHHhCcHHHHHHHHHHHhCCCHHHHH
Confidence 355566666666655443 233555666666 55666643332222222 234578888888888888999
Q ss_pred HHHHhhhhccccCCCCCCCCCCCCCchHHHHHHHHhhhcCCCCCchhHHhHHhhhhhccCCHHHHHhhcCCHHHHHHHHH
Q psy4703 233 RALVGLCKLGSMGGSDASIRPFADGSTRKLAEACRRFLVNPARDPDIRRWAAEGLAYLTLDAEVKEALIEDKPALAALVD 312 (401)
Q Consensus 233 ralvgLckl~~~gg~d~~~~~~~~~s~~~l~~~~~~~l~~~~~~~~~~~~~~eglay~~~~~~vke~~~~d~~~l~~l~~ 312 (401)
.|+..|..++.. . ......+++. ..++..|..|++.|..+ .++..+..|.+
T Consensus 131 ~a~~aL~~~~~~------------~----~~~~L~~~l~--d~~~~vr~~a~~aL~~~-----------~~~~~~~~L~~ 181 (211)
T 3ltm_A 131 AAAFALGEIGDE------------R----AVEPLIKALK--DEDGWVRQSAADALGEI-----------GGERVRAAMEK 181 (211)
T ss_dssp HHHHHHHHHCCG------------G----GHHHHHHHTT--CSSHHHHHHHHHHHHHH-----------CSHHHHHHHHH
T ss_pred HHHHHHHHcCCH------------H----HHHHHHHHHc--CCCHHHHHHHHHHHHHh-----------CchhHHHHHHH
Confidence 888888888631 1 2233444552 34678899999999987 35777888888
Q ss_pred HHhcCCCCcchhhhhhhHHhhcccCCc
Q psy4703 313 VASSVKYKNVWNGTQSDALKDVDKAFD 339 (401)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~n~~~~~~ 339 (401)
++++. +..+-...+ ..+.++++..+
T Consensus 182 ~l~d~-~~~vr~~A~-~aL~~~~~~~~ 206 (211)
T 3ltm_A 182 LAETG-TGFARKVAV-NYLETHKSFNH 206 (211)
T ss_dssp HHHHC-CHHHHHHHH-HHHHC------
T ss_pred HHhCC-CHHHHHHHH-HHHHhcCCCCC
Confidence 88876 667888888 88888876543
No 241
>2jdq_A Importin alpha-1 subunit; transport, PB2 subunit, nuclear protein, protein transport, armadillo repeats; 2.2A {Homo sapiens} PDB: 3tj3_A
Probab=95.54 E-value=0.23 Score=48.37 Aligned_cols=174 Identities=14% Similarity=0.083 Sum_probs=110.9
Q ss_pred ChhHHHHHHHHHHHhhhcc-hhhHHHhhhhHHHHHHHHhhccCchhHHhh-H---HH-------HHHHH-HHhcHHHHHH
Q psy4703 155 PMDKRVTAVNNLVVLAREM-SGAEMLLKSGVAKQINTLLKCETNEEIYLG-E---ED-------FITSI-IKQGVDILKR 221 (401)
Q Consensus 155 ~~~~~~~a~~~L~~l~~~~-~gae~~~~e~~v~~L~~ll~~~~~~e~~lA-~---e~-------fi~~i-~~~gv~~Lk~ 221 (401)
+...+..++..+....... .....+...+++..+..+++ +.++++... . .. +-..+ ..++++.|-.
T Consensus 78 ~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~lL~-~~~~~vr~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~ 156 (450)
T 2jdq_A 78 NCTLQFESAWVLTNIASGNSLQTRIVIQAGAVPIFIELLS-SEFEDVQEQAVWALGNIAGDSTMCRDYVLDCNILPPLLQ 156 (450)
T ss_dssp CHHHHHHHHHHHHHHHSSCHHHHHHHHHTTHHHHHHHHTT-CSCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTCHHHHHH
T ss_pred CHHHHHHHHHHHHHHhcCCHHHHHHHHhCCCHHHHHHHHc-CCCHHHHHHHHHHHHHHccCCHHHHHHHHHCCCHHHHHH
Confidence 5566677777776665532 22334445677888888888 556666432 1 11 11222 3467999999
Q ss_pred HHcC-CChhHHHHHHHhhhhccccCCCCCCCCCCCCCchHHHHHHHHhhhcCCCCCchhHHhHHhhhhhccCC-HHHHHh
Q psy4703 222 LYMS-KNENIRVRALVGLCKLGSMGGSDASIRPFADGSTRKLAEACRRFLVNPARDPDIRRWAAEGLAYLTLD-AEVKEA 299 (401)
Q Consensus 222 l~~s-~~d~i~~ralvgLckl~~~gg~d~~~~~~~~~s~~~l~~~~~~~l~~~~~~~~~~~~~~eglay~~~~-~~vke~ 299 (401)
++++ .++.++..++..|+.+....+... ...+..|.. ...-+++. ..+++.+..|+..|.+++-. ++.++.
T Consensus 157 ~l~~~~~~~v~~~a~~~L~~l~~~~~~~~-~~~~~~~~l----~~L~~~l~--~~~~~v~~~a~~~L~~l~~~~~~~~~~ 229 (450)
T 2jdq_A 157 LFSKQNRLTMTRNAVWALSNLCRGKSPPP-EFAKVSPCL----NVLSWLLF--VSDTDVLADACWALSYLSDGPNDKIQA 229 (450)
T ss_dssp HTTSCCCHHHHHHHHHHHHHHHCCSSSCC-CGGGTGGGH----HHHHHHTT--CCCHHHHHHHHHHHHHHTSSSHHHHHH
T ss_pred HhcCCCCHHHHHHHHHHHHHHhCCCCCCC-CHHHHHHHH----HHHHHHHc--cCCHHHHHHHHHHHHHHHCCCcHHHHH
Confidence 9984 678888888888877775321111 112223333 33333343 34678899999999999874 555555
Q ss_pred hcCCHHHHHHHHHHHhcCCCCcchhhhhhhHHhhcccCCc
Q psy4703 300 LIEDKPALAALVDVASSVKYKNVWNGTQSDALKDVDKAFD 339 (401)
Q Consensus 300 ~~~d~~~l~~l~~~~~~~~~~~~~~~~~~~~~~n~~~~~~ 339 (401)
++. ...+..|++++++. +..+...++ .++.|++...+
T Consensus 230 ~~~-~~~i~~L~~ll~~~-~~~v~~~a~-~~L~~l~~~~~ 266 (450)
T 2jdq_A 230 VID-AGVCRRLVELLMHN-DYKVVSPAL-RAVGNIVTGDD 266 (450)
T ss_dssp HHH-TTTHHHHHHHTTCS-CHHHHHHHH-HHHHHHTTSCH
T ss_pred HHH-cCcHHHHHHHHCCC-chhHHHHHH-HHHHHHhhCCh
Confidence 543 45788899998866 667888888 88999987655
No 242
>4db6_A Armadillo repeat protein; solenoid repeat, armadillo repeat motif, de novo protein; 1.80A {Synthetic construct} PDB: 4db9_A 4dba_A
Probab=95.33 E-value=0.022 Score=49.90 Aligned_cols=117 Identities=26% Similarity=0.249 Sum_probs=83.3
Q ss_pred HHhcHHHHHHHHcCCChhHHHHHHHhhhhccccCCCCCCCCC-CCCCchHHHHHHHHhhhcCCCCCchhHHhHHhhhhhc
Q psy4703 212 IKQGVDILKRLYMSKNENIRVRALVGLCKLGSMGGSDASIRP-FADGSTRKLAEACRRFLVNPARDPDIRRWAAEGLAYL 290 (401)
Q Consensus 212 ~~~gv~~Lk~l~~s~~d~i~~ralvgLckl~~~gg~d~~~~~-~~~~s~~~l~~~~~~~l~~~~~~~~~~~~~~eglay~ 290 (401)
..++++.|-.++++.++.++..|+..|+.+... .+..... ...|.. ...-++|.. .+++.+..|+..|..+
T Consensus 52 ~~g~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~--~~~~~~~i~~~g~i----~~L~~lL~~--~~~~v~~~a~~~L~~l 123 (210)
T 4db6_A 52 DAGALPALVQLLSSPNEQILQEALWALSNIASG--GNEQIQAVIDAGAL----PALVQLLSS--PNEQILQEALWALSNI 123 (210)
T ss_dssp HTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTTS--CHHHHHHHHHTTCH----HHHHHHTTC--SCHHHHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHcCCCHHHHHHHHHHHHHHhcC--CcHHHHHHHHCCCH----HHHHHHHcC--CcHHHHHHHHHHHHHH
Confidence 346799999999988999999888888888642 1111000 011222 223334432 3678999999999999
Q ss_pred cC-CHHHHHhhcCCHHHHHHHHHHHhcCCCCcchhhhhhhHHhhcccCCc
Q psy4703 291 TL-DAEVKEALIEDKPALAALVDVASSVKYKNVWNGTQSDALKDVDKAFD 339 (401)
Q Consensus 291 ~~-~~~vke~~~~d~~~l~~l~~~~~~~~~~~~~~~~~~~~~~n~~~~~~ 339 (401)
+. +++.++.++ +...+..|++++++. +..+..-++ .+|.||+..-+
T Consensus 124 ~~~~~~~~~~~~-~~~~i~~L~~ll~~~-~~~v~~~a~-~aL~~l~~~~~ 170 (210)
T 4db6_A 124 ASGGNEQIQAVI-DAGALPALVQLLSSP-NEQILQEAL-WALSNIASGGN 170 (210)
T ss_dssp TTSCHHHHHHHH-HTTHHHHHHHHTTCS-CHHHHHHHH-HHHHHHHTSCH
T ss_pred HcCCHHHHHHHH-HcCcHHHHHHHHcCC-CHHHHHHHH-HHHHHHHcCCc
Confidence 95 666666665 567899999999987 777888888 99999997656
No 243
>3kae_A CDC27, possible protein of nuclear scaffold; tetratricopeptide repeat protein, protein binding; 2.30A {Encephalitozoon cuniculi}
Probab=95.06 E-value=0.3 Score=42.60 Aligned_cols=96 Identities=17% Similarity=0.109 Sum_probs=73.9
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHhhcCCCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHH--Hh---------------
Q psy4703 14 ESGNSAFKQGDYETALDFYTKALKVTAEESHERATCLKNRAAVYLKQNQNDKVIEDCSKSL--EI--------------- 76 (401)
Q Consensus 14 ~~Gn~~~~~g~y~eAi~~y~~Al~l~~p~~~~~~~~~~n~a~~y~klg~y~~Ai~~~~kAL--~l--------------- 76 (401)
-.+-.++-.|.|..++-+.. .++ .....+..+.||.++++|.+|+...+..| +.
T Consensus 38 L~~I~LyyngEY~R~Lf~L~---~lN------T~Ts~YYk~LCy~klKdYkkA~~~le~il~~kvd~d~~~d~~~~~ffv 108 (242)
T 3kae_A 38 LMSIVLYLNGEYTRALFHLH---KLN------TCTSKYYESLCYKKKKDYKKAIKSLESILEGKVERDPDVDARIQEMFV 108 (242)
T ss_dssp HHHHHHHHTTCHHHHHHHHH---TCC------BHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCSBCCCCCCHHHHTTSC
T ss_pred hhhhhhhhcchHhHHHHHHH---hcc------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCcccccccceeee
Confidence 34666777888887765543 344 56666778999999999999999999999 22
Q ss_pred CCCCHHH-HHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCccHH
Q psy4703 77 VPDDPKA-LFRRCQAYEAIGKFEEAYTDAKHIHRVEPTNKAIQ 118 (401)
Q Consensus 77 dP~~~kA-~~~~a~a~~~lg~~eeA~~~~~kal~l~P~~~~~~ 118 (401)
||.+-+. +.-+|..+..+|.-+||+.+|.+....+|--+.+.
T Consensus 109 d~~DkEfFy~l~a~lltq~g~r~EaI~y~~~Sf~~~~lf~~vE 151 (242)
T 3kae_A 109 DPGDEEFFESLLGDLCTLSGYREEGIGHYVRSFGKSFLFSPVE 151 (242)
T ss_dssp CTTCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHHHHH
T ss_pred ccchHHHHHHHHHHHHHHhcCHHHhhhHhhhhcCCccccchHH
Confidence 3555554 45579999999999999999999999988654443
No 244
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=94.86 E-value=0.22 Score=49.62 Aligned_cols=101 Identities=15% Similarity=-0.004 Sum_probs=82.7
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhhcCCCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC--CCCH----HHH
Q psy4703 11 KLKESGNSAFKQGDYETALDFYTKALKVTAEESHERATCLKNRAAVYLKQNQNDKVIEDCSKSLEIV--PDDP----KAL 84 (401)
Q Consensus 11 ~l~~~Gn~~~~~g~y~eAi~~y~~Al~l~~p~~~~~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~ld--P~~~----kA~ 84 (401)
.+..+|..+++.|++++|++.|.++...+ ........++.....+++..++|..+...+.++-.+- ..++ +..
T Consensus 133 ~~~~la~~~~~~Gd~~~A~~~~~~~~~~~-~~~~~kid~~l~~irl~l~~~d~~~~~~~~~ka~~~~~~~~d~~~~~~lk 211 (429)
T 4b4t_R 133 AWINLGEYYAQIGDKDNAEKTLGKSLSKA-ISTGAKIDVMLTIARLGFFYNDQLYVKEKLEAVNSMIEKGGDWERRNRYK 211 (429)
T ss_dssp CCHHHHHHHHHHCCCTTHHHHHHHHHHHH-TCCCSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTCCCTHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhc-CChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhhhcCCCHHHHHHHH
Confidence 45689999999999999999999999887 5545678899999999999999999999999986552 2222 334
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHhhCC
Q psy4703 85 FRRCQAYEAIGKFEEAYTDAKHIHRVEP 112 (401)
Q Consensus 85 ~~~a~a~~~lg~~eeA~~~~~kal~l~P 112 (401)
...|.++...++|.+|...|-.++.-..
T Consensus 212 ~~~gl~~l~~r~f~~Aa~~f~e~~~t~~ 239 (429)
T 4b4t_R 212 TYYGIHCLAVRNFKEAAKLLVDSLATFT 239 (429)
T ss_dssp HHHHHGGGGTSCHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHhChHHHHHHHHHHHhccCC
Confidence 5567788899999999999988876543
No 245
>3ltj_A Alpharep-4; protein engineering, heat-like repeat, protein binding; 1.80A {Synthetic}
Probab=94.80 E-value=0.49 Score=40.94 Aligned_cols=141 Identities=21% Similarity=0.188 Sum_probs=90.8
Q ss_pred CCChhHHHHHHHHHHHhhhcchhhHHHhhhhHHHHHHHHhhccCchhHHhhHHHHHHHH-HHhcHHHHHHHHcCCChhHH
Q psy4703 153 SAPMDKRVTAVNNLVVLAREMSGAEMLLKSGVAKQINTLLKCETNEEIYLGEEDFITSI-IKQGVDILKRLYMSKNENIR 231 (401)
Q Consensus 153 ~~~~~~~~~a~~~L~~l~~~~~gae~~~~e~~v~~L~~ll~~~~~~e~~lA~e~fi~~i-~~~gv~~Lk~l~~s~~d~i~ 231 (401)
+++...+..++..|...+.. ..+..+..++. +.++.+...--..+..+ ....++.|..++++.++.++
T Consensus 25 ~~~~~vr~~A~~~L~~~~~~----------~~~~~L~~~l~-~~~~~vr~~a~~~L~~~~~~~~~~~L~~~l~d~~~~vr 93 (201)
T 3ltj_A 25 DDSYYVRRAAAYALGKIGDE----------RAVEPLIKALK-DEDAWVRRAAADALGQIGDERAVEPLIKALKDEDGWVR 93 (201)
T ss_dssp CSCHHHHHHHHHHHHHHCCG----------GGHHHHHHHTT-CSSHHHHHHHHHHHHHHCCGGGHHHHHHHTTCSSHHHH
T ss_pred CCCHHHHHHHHHHHHhcCCh----------hHHHHHHHHHc-CCCHHHHHHHHHHHHhhCCHHHHHHHHHHHcCCCHHHH
Confidence 45566777777777665542 34566666666 55665533222222222 23568888888888888899
Q ss_pred HHHHHhhhhccccCCCCCCCCCCCCCchHHHHHHHHhhhcCCCCCchhHHhHHhhhhhccCCHHHHHhhcCCHHHHHHHH
Q psy4703 232 VRALVGLCKLGSMGGSDASIRPFADGSTRKLAEACRRFLVNPARDPDIRRWAAEGLAYLTLDAEVKEALIEDKPALAALV 311 (401)
Q Consensus 232 ~ralvgLckl~~~gg~d~~~~~~~~~s~~~l~~~~~~~l~~~~~~~~~~~~~~eglay~~~~~~vke~~~~d~~~l~~l~ 311 (401)
..|+..|+.++.. .. .....++|. ..++..|.+|++.|+.+. ++..+..|+
T Consensus 94 ~~a~~aL~~~~~~------------~~----~~~L~~~l~--d~~~~vr~~a~~aL~~~~-----------~~~~~~~L~ 144 (201)
T 3ltj_A 94 QSAAVALGQIGDE------------RA----VEPLIKALK--DEDWFVRIAAAFALGEIG-----------DERAVEPLI 144 (201)
T ss_dssp HHHHHHHHHHCCG------------GG----HHHHHHHTT--CSSHHHHHHHHHHHHHHT-----------CGGGHHHHH
T ss_pred HHHHHHHHHhCcH------------HH----HHHHHHHHc--CCCHHHHHHHHHHHHHhC-----------CHHHHHHHH
Confidence 9888888887631 11 222333442 346788999999998873 456777888
Q ss_pred HHHhcCCCCcchhhhhhhHHhhcc
Q psy4703 312 DVASSVKYKNVWNGTQSDALKDVD 335 (401)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~n~~ 335 (401)
+++++. +..+-..++ ..+.++.
T Consensus 145 ~~l~d~-~~~vr~~A~-~aL~~~~ 166 (201)
T 3ltj_A 145 KALKDE-DGWVRQSAA-DALGEIG 166 (201)
T ss_dssp HHTTCS-SHHHHHHHH-HHHHHHC
T ss_pred HHHcCC-CHHHHHHHH-HHHHHhC
Confidence 888765 666777777 7777763
No 246
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=94.75 E-value=1.5 Score=44.34 Aligned_cols=148 Identities=11% Similarity=-0.017 Sum_probs=98.0
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhhcC-CCCcchHHHHHHHHHHHHHcC---------CHHHHHHHHHHHHHhC-CCC
Q psy4703 12 LKESGNSAFKQGDYETALDFYTKALKVTA-EESHERATCLKNRAAVYLKQN---------QNDKVIEDCSKSLEIV-PDD 80 (401)
Q Consensus 12 l~~~Gn~~~~~g~y~eAi~~y~~Al~l~~-p~~~~~~~~~~n~a~~y~klg---------~y~~Ai~~~~kAL~ld-P~~ 80 (401)
+...=+.+.+.|++++|+..|++..+..- | +...|..+-.++.+.+ ..++|...|++..+.. +-+
T Consensus 29 l~~~id~c~k~G~~~~A~~lf~~M~~~Gv~p----d~~tyn~Li~~c~~~~~~~~~~~~~~l~~A~~lf~~M~~~G~~Pd 104 (501)
T 4g26_A 29 LKQKLDMCSKKGDVLEALRLYDEARRNGVQL----SQYHYNVLLYVCSLAEAATESSPNPGLSRGFDIFKQMIVDKVVPN 104 (501)
T ss_dssp HHHHHHHTTTSCCHHHHHHHHHHHHHHTCCC----CHHHHHHHHHHHTTCCCCSSSSCCHHHHHHHHHHHHHHHTTCCCC
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHcCCCC----CHhHHHHHHHHHHhCCchhhhhhcchHHHHHHHHHHHHHhCCCCC
Confidence 44555777899999999999999887641 4 3445555544554433 3788999998877653 236
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhh--CCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc--CCCCh
Q psy4703 81 PKALFRRCQAYEAIGKFEEAYTDAKHIHRV--EPTNKAIQPVLSRLFAIVTKRMQENEQLQNKVHNMFKYVFD--TSAPM 156 (401)
Q Consensus 81 ~kA~~~~a~a~~~lg~~eeA~~~~~kal~l--~P~~~~~~~~L~~l~~~~~~~~~a~~~~~~~~~~~~~~~~~--~~~~~ 156 (401)
...|..+-.+|.+.|++++|...|++..+. .|+ ......+-..+-..++..+ +..+|+.+.. ..++.
T Consensus 105 ~~tyn~lI~~~~~~g~~~~A~~l~~~M~~~g~~Pd-~~tyn~lI~~~~~~g~~~~--------A~~l~~~M~~~G~~Pd~ 175 (501)
T 4g26_A 105 EATFTNGARLAVAKDDPEMAFDMVKQMKAFGIQPR-LRSYGPALFGFCRKGDADK--------AYEVDAHMVESEVVPEE 175 (501)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCCCC-HHHHHHHHHHHHHTTCHHH--------HHHHHHHHHHTTCCCCH
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCc-cceehHHHHHHHHCCCHHH--------HHHHHHHHHhcCCCCCH
Confidence 788999999999999999999999988764 454 3344444444444444433 3345666555 44555
Q ss_pred hHHHHHHHHHHHhhhc
Q psy4703 157 DKRVTAVNNLVVLARE 172 (401)
Q Consensus 157 ~~~~~a~~~L~~l~~~ 172 (401)
......+..+...++.
T Consensus 176 ~ty~~Li~~~~~~g~~ 191 (501)
T 4g26_A 176 PELAALLKVSMDTKNA 191 (501)
T ss_dssp HHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHhhCCCH
Confidence 5555555556665654
No 247
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=94.71 E-value=0.55 Score=47.46 Aligned_cols=113 Identities=13% Similarity=-0.038 Sum_probs=85.7
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcCCCCcchHHHHHHHHHHHHHcC-CHHHHHHHHHHHHHhCCCCHHHHHHH
Q psy4703 9 YNKLKESGNSAFKQGDYETALDFYTKALKVTAEESHERATCLKNRAAVYLKQN-QNDKVIEDCSKSLEIVPDDPKALFRR 87 (401)
Q Consensus 9 a~~l~~~Gn~~~~~g~y~eAi~~y~~Al~l~~p~~~~~~~~~~n~a~~y~klg-~y~~Ai~~~~kAL~ldP~~~kA~~~~ 87 (401)
...|...+....+.++.+.|...|.+| .. |. ....+|...|..-+..+ +++.|...|+.+++..|+.+..+...
T Consensus 286 ~~lw~~y~~~~~r~~~~~~AR~i~~~A--~~-~~--~~~~v~i~~A~lE~~~~~d~~~ar~ife~al~~~~~~~~~~~~y 360 (493)
T 2uy1_A 286 DLLRINHLNYVLKKRGLELFRKLFIEL--GN-EG--VGPHVFIYCAFIEYYATGSRATPYNIFSSGLLKHPDSTLLKEEF 360 (493)
T ss_dssp HHHHHHHHHHHHHHHCHHHHHHHHHHH--TT-SC--CCHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHh--hC-CC--CChHHHHHHHHHHHHHCCChHHHHHHHHHHHHHCCCCHHHHHHH
Confidence 345666666666788899999999999 34 43 24557766676666666 69999999999999999999988888
Q ss_pred HHHHHHcCCHHHHHHHHHHHHhhCCCCccHHHHHHHHHHHHHH
Q psy4703 88 CQAYEAIGKFEEAYTDAKHIHRVEPTNKAIQPVLSRLFAIVTK 130 (401)
Q Consensus 88 a~a~~~lg~~eeA~~~~~kal~l~P~~~~~~~~L~~l~~~~~~ 130 (401)
+.....+|+.+.|...|+++ +....++..........+.
T Consensus 361 id~e~~~~~~~~aR~l~er~----~k~~~lw~~~~~fE~~~G~ 399 (493)
T 2uy1_A 361 FLFLLRIGDEENARALFKRL----EKTSRMWDSMIEYEFMVGS 399 (493)
T ss_dssp HHHHHHHTCHHHHHHHHHHS----CCBHHHHHHHHHHHHHHSC
T ss_pred HHHHHHcCCHHHHHHHHHHH----HHHHHHHHHHHHHHHHCCC
Confidence 88889999999999999997 3344555555444444443
No 248
>4b8j_A Importin subunit alpha-1A; transport protein, nuclear localization signal; 2.00A {Oryza sativa japonica group} PDB: 4b8o_A 2yns_A 4b8p_A
Probab=94.69 E-value=0.27 Score=49.54 Aligned_cols=180 Identities=12% Similarity=0.049 Sum_probs=113.0
Q ss_pred hhcCCCChhHHHHHHHHHHHhhhcc-hhhHHHhhhhHHHHHHHHhhccCchhHHhhH----H-------HHHHHH-HHhc
Q psy4703 149 VFDTSAPMDKRVTAVNNLVVLAREM-SGAEMLLKSGVAKQINTLLKCETNEEIYLGE----E-------DFITSI-IKQG 215 (401)
Q Consensus 149 ~~~~~~~~~~~~~a~~~L~~l~~~~-~gae~~~~e~~v~~L~~ll~~~~~~e~~lA~----e-------~fi~~i-~~~g 215 (401)
++..+.+...+..++..|..+.... .....+...+++..+..++. +.++++...- . .+-..+ ..++
T Consensus 125 lL~~~~~~~v~~~A~~~L~~l~~~~~~~~~~~~~~g~i~~L~~lL~-~~~~~v~~~a~~aL~~l~~~~~~~~~~i~~~g~ 203 (528)
T 4b8j_A 125 FLTREDFPQLQFEAAWALTNIASGTSENTKVVIDHGAVPIFVKLLG-SSSDDVREQAVWALGNVAGDSPKCRDLVLANGA 203 (528)
T ss_dssp HHTCTTCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHTT-CSCHHHHHHHHHHHHHHHHTCHHHHHHHHHTTC
T ss_pred HhCCCCCHHHHHHHHHHHHHHhCCCHHHHHHHHhCCcHHHHHHHhc-CCCHHHHHHHHHHHHHHhCCChhhHHHHHHCCc
Confidence 3333333666777777777666643 33344555678999999988 5566664321 1 111223 3356
Q ss_pred HHHHHHHH-cCCChhHHHHHHHhhhhccccCCCCCCCCCCCCCchHHHHHHHHhhhcCCCCCchhHHhHHhhhhhccCCH
Q psy4703 216 VDILKRLY-MSKNENIRVRALVGLCKLGSMGGSDASIRPFADGSTRKLAEACRRFLVNPARDPDIRRWAAEGLAYLTLDA 294 (401)
Q Consensus 216 v~~Lk~l~-~s~~d~i~~ralvgLckl~~~gg~d~~~~~~~~~s~~~l~~~~~~~l~~~~~~~~~~~~~~eglay~~~~~ 294 (401)
++.|-.++ .+.+..++..++..|+.+..... .. ......| +....-++|. ..+++.+..|+..|++++-.+
T Consensus 204 l~~Ll~lL~~~~~~~v~~~a~~~L~~L~~~~~-~~-~~~~~~~----~l~~L~~lL~--~~~~~v~~~a~~aL~~l~~~~ 275 (528)
T 4b8j_A 204 LLPLLAQLNEHTKLSMLRNATWTLSNFCRGKP-QP-SFEQTRP----ALPALARLIH--SNDEEVLTDACWALSYLSDGT 275 (528)
T ss_dssp HHHHHHTCCTTCCHHHHHHHHHHHHHHHCSSS-CC-CHHHHTT----HHHHHHHHTT--CCCHHHHHHHHHHHHHHTSSC
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHcCCC-CC-cHHHHHH----HHHHHHHHHC--CCCHHHHHHHHHHHHHHHcCC
Confidence 88888888 46777887777777777765321 11 1111112 2333333442 346789999999999999766
Q ss_pred HHHHhhcCCHHHHHHHHHHHhcCCCCcchhhhhhhHHhhcccCCc
Q psy4703 295 EVKEALIEDKPALAALVDVASSVKYKNVWNGTQSDALKDVDKAFD 339 (401)
Q Consensus 295 ~vke~~~~d~~~l~~l~~~~~~~~~~~~~~~~~~~~~~n~~~~~~ 339 (401)
+-.-+.+-+...+..|+.++++. +..+.-.++ .++.||+...+
T Consensus 276 ~~~~~~~~~~g~v~~Lv~lL~~~-~~~v~~~a~-~~L~nl~~~~~ 318 (528)
T 4b8j_A 276 NDKIQAVIEAGVCPRLVELLLHP-SPSVLIPAL-RTVGNIVTGDD 318 (528)
T ss_dssp HHHHHHHHHTTCHHHHHHHTTCS-CHHHHHHHH-HHHHHHTTSCH
T ss_pred HHHHHHHHHcCHHHHHHHHHcCC-ChhHHHHHH-HHHHHHHcCCH
Confidence 55433334557889999999887 667888888 89999986555
No 249
>2jdq_A Importin alpha-1 subunit; transport, PB2 subunit, nuclear protein, protein transport, armadillo repeats; 2.2A {Homo sapiens} PDB: 3tj3_A
Probab=94.65 E-value=0.058 Score=52.81 Aligned_cols=175 Identities=14% Similarity=0.102 Sum_probs=108.7
Q ss_pred CChhHHHHHHHHHHHhhh--cchhhHHHhhh-hHHHHHHHHhhccC-chhHHhhHHHHH-----------HHH-HHhcHH
Q psy4703 154 APMDKRVTAVNNLVVLAR--EMSGAEMLLKS-GVAKQINTLLKCET-NEEIYLGEEDFI-----------TSI-IKQGVD 217 (401)
Q Consensus 154 ~~~~~~~~a~~~L~~l~~--~~~gae~~~~e-~~v~~L~~ll~~~~-~~e~~lA~e~fi-----------~~i-~~~gv~ 217 (401)
.+...+..++..+..+.. .+.....+... +.+..+.++++ +. ++++...--..+ ..+ ..++++
T Consensus 32 ~~~~~r~~A~~~L~~l~~~~~~~~~~~~~~~~~~i~~L~~~L~-~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i~ 110 (450)
T 2jdq_A 32 KSPEQQLSATQKFRKLLSKEPNPPIDEVISTPGVVARFVEFLK-RKENCTLQFESAWVLTNIASGNSLQTRIVIQAGAVP 110 (450)
T ss_dssp SCHHHHHHHHHHHHHHHHSSSSCCHHHHHTSTTHHHHHHHHHT-CTTCHHHHHHHHHHHHHHHSSCHHHHHHHHHTTHHH
T ss_pred CCHHHHHHHHHHHHHHhcCCCCCcHHHHHHcCCcHHHHHHHHC-CCCCHHHHHHHHHHHHHHhcCCHHHHHHHHhCCCHH
Confidence 345556666666644321 12223444455 67888888887 44 566544321111 222 346799
Q ss_pred HHHHHHcCCChhHHHHHHHhhhhccccCCCCCCCCCCCCCchHHHHHHHHhhhcCCCCCchhHHhHHhhhhhccCC--HH
Q psy4703 218 ILKRLYMSKNENIRVRALVGLCKLGSMGGSDASIRPFADGSTRKLAEACRRFLVNPARDPDIRRWAAEGLAYLTLD--AE 295 (401)
Q Consensus 218 ~Lk~l~~s~~d~i~~ralvgLckl~~~gg~d~~~~~~~~~s~~~l~~~~~~~l~~~~~~~~~~~~~~eglay~~~~--~~ 295 (401)
.|-++++++++.++..|+..|+.+..... +....-...|.. ...-+++. ...+.+.|+.|+..|..++-. |.
T Consensus 111 ~L~~lL~~~~~~vr~~a~~~L~~l~~~~~-~~~~~~~~~~~i----~~L~~~l~-~~~~~~v~~~a~~~L~~l~~~~~~~ 184 (450)
T 2jdq_A 111 IFIELLSSEFEDVQEQAVWALGNIAGDST-MCRDYVLDCNIL----PPLLQLFS-KQNRLTMTRNAVWALSNLCRGKSPP 184 (450)
T ss_dssp HHHHHTTCSCHHHHHHHHHHHHHHHTTCH-HHHHHHHHTTCH----HHHHHHTT-SCCCHHHHHHHHHHHHHHHCCSSSC
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHccCCH-HHHHHHHHCCCH----HHHHHHhc-CCCCHHHHHHHHHHHHHHhCCCCCC
Confidence 99999999999999999999988875321 000000011222 22223332 335678999999999998854 45
Q ss_pred HHHhhcCCHHHHHHHHHHHhcCCCCcchhhhhhhHHhhcccCCc
Q psy4703 296 VKEALIEDKPALAALVDVASSVKYKNVWNGTQSDALKDVDKAFD 339 (401)
Q Consensus 296 vke~~~~d~~~l~~l~~~~~~~~~~~~~~~~~~~~~~n~~~~~~ 339 (401)
.+..++ ..++..|++++++. +..+...++ .++.||+...+
T Consensus 185 ~~~~~~--~~~l~~L~~~l~~~-~~~v~~~a~-~~L~~l~~~~~ 224 (450)
T 2jdq_A 185 PEFAKV--SPCLNVLSWLLFVS-DTDVLADAC-WALSYLSDGPN 224 (450)
T ss_dssp CCGGGT--GGGHHHHHHHTTCC-CHHHHHHHH-HHHHHHTSSSH
T ss_pred CCHHHH--HHHHHHHHHHHccC-CHHHHHHHH-HHHHHHHCCCc
Confidence 555554 66888999999876 777777788 88999987654
No 250
>1xm9_A Plakophilin 1; armadillo repeat, cell adhesion; 2.80A {Homo sapiens} SCOP: a.118.1.24
Probab=94.59 E-value=0.32 Score=48.55 Aligned_cols=175 Identities=14% Similarity=0.087 Sum_probs=110.0
Q ss_pred ChhHHHHHHHHHHHhhhcchhh-HHHhhhhHHHHHHHHhhccCchhHHhhH-----------HHHHHHH-HHhcHHHHHH
Q psy4703 155 PMDKRVTAVNNLVVLAREMSGA-EMLLKSGVAKQINTLLKCETNEEIYLGE-----------EDFITSI-IKQGVDILKR 221 (401)
Q Consensus 155 ~~~~~~~a~~~L~~l~~~~~ga-e~~~~e~~v~~L~~ll~~~~~~e~~lA~-----------e~fi~~i-~~~gv~~Lk~ 221 (401)
+.+.+..++..+..+...+... ..+...|++..+..+++ +.++++...- ++.-..+ ..+|++.|-+
T Consensus 15 ~~~~q~~A~~~L~~l~~~~~~~~~~i~~~g~i~~Lv~lL~-s~~~~~~~~A~~aL~nLa~~~~~~k~~i~~~G~i~~Lv~ 93 (457)
T 1xm9_A 15 DEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLR-SPNQNVQQAAAGALRNLVFRSTTNKLETRRQNGIREAVS 93 (457)
T ss_dssp CTHHHHHHHHHHHHHTSSCSSHHHHHHHTTHHHHHHHHTT-SSCHHHHHHHHHHHHHHHSSCHHHHHHHHHTTCHHHHHH
T ss_pred CHHHHHHHHHHHHHHHcCChHHHHHHHHcCCHHHHHHHHc-CCCHHHHHHHHHHHHHHhcCCHHHHHHHHHcCCHHHHHH
Confidence 3455666666666655444433 35667788999999988 6666653321 1111334 4577999999
Q ss_pred HHc-CCChhHHHHHHHhhhhccccCCCCCCCCCCCCCchHHHHHHHHh----hhcCC------CCCchhHHhHHhhhhhc
Q psy4703 222 LYM-SKNENIRVRALVGLCKLGSMGGSDASIRPFADGSTRKLAEACRR----FLVNP------ARDPDIRRWAAEGLAYL 290 (401)
Q Consensus 222 l~~-s~~d~i~~ralvgLckl~~~gg~d~~~~~~~~~s~~~l~~~~~~----~l~~~------~~~~~~~~~~~eglay~ 290 (401)
+++ +++++++..|...|.-+... +.......+|..-.|.+.... +-..+ ..+.+..+.|+--|.++
T Consensus 94 lL~~~~~~~~~~~a~~aL~nLa~~---~~~~~~i~~g~i~~Lv~ll~~~~s~~~~~~~~~~~e~~~~~v~~~a~~aL~nL 170 (457)
T 1xm9_A 94 LLRRTGNAEIQKQLTGLLWNLSST---DELKEELIADALPVLADRVIIPFSGWCDGNSNMSREVVDPEVFFNATGCLRNL 170 (457)
T ss_dssp HHTTCCCHHHHHHHHHHHHHHHTS---SSTHHHHHHHHHHHHHHHTTHHHHTCC---------CCCHHHHHHHHHHHHHH
T ss_pred HHhhCCCHHHHHHHHHHHHHHhcC---HHhHHHHHhccHHHHHHHHhccccccccCccchhcccccHHHHHHHHHHHHHH
Confidence 998 88889988777777776642 222211222333334433311 00111 13567778999999999
Q ss_pred cCCHHHHHhhcCCHHHHHHHHHHHhcC-----C-CCcchhhhhhhHHhhcc
Q psy4703 291 TLDAEVKEALIEDKPALAALVDVASSV-----K-YKNVWNGTQSDALKDVD 335 (401)
Q Consensus 291 ~~~~~vke~~~~d~~~l~~l~~~~~~~-----~-~~~~~~~~~~~~~~n~~ 335 (401)
+-+++.+..+++-+..+..|+.++++. + ++.+..+ + .++.||+
T Consensus 171 s~~~~~~~~i~~~~g~i~~Lv~lL~~~~~~~~~~~~~~e~a-~-~~L~nLs 219 (457)
T 1xm9_A 171 SSADAGRQTMRNYSGLIDSLMAYVQNCVAASRCDDKSVENC-M-CVLHNLS 219 (457)
T ss_dssp TTSHHHHHHHTTSTTHHHHHHHHHHHHHHHTCTTCTTHHHH-H-HHHHHHT
T ss_pred ccCHHHHHHHHHcCCCHHHHHHHHHhhccccCCchHHHHHH-H-HHHHhcc
Confidence 999999999887667899999998752 1 3444444 4 5688987
No 251
>2z6g_A B-catenin; FULL-length, beta-catenin, cell adhesion; 3.40A {Danio rerio}
Probab=94.58 E-value=0.038 Score=59.40 Aligned_cols=118 Identities=17% Similarity=0.180 Sum_probs=87.9
Q ss_pred HHHhcHHHHHHHHcCCChhHHHHHHHhhhhccccCCCCCCCCCCC--CCchHHHHHHHHhhhcCCCCCchhHHhHHhhhh
Q psy4703 211 IIKQGVDILKRLYMSKNENIRVRALVGLCKLGSMGGSDASIRPFA--DGSTRKLAEACRRFLVNPARDPDIRRWAAEGLA 288 (401)
Q Consensus 211 i~~~gv~~Lk~l~~s~~d~i~~ralvgLckl~~~gg~d~~~~~~~--~~s~~~l~~~~~~~l~~~~~~~~~~~~~~egla 288 (401)
+...+++.|..++.+++..++..|+..|+.+..... ...... +|....|. ++|.+ +.+++.|+.|+..|.
T Consensus 147 i~~g~ip~Lv~lL~~~d~~vr~~A~~~L~~L~~~~~---~~~~i~~~~~~i~~Lv----~~L~~-~~d~~vr~~Aa~aL~ 218 (780)
T 2z6g_A 147 LATRAIPELTKLLNDEDQVVVNKAAVMVHQLSKKEA---SRHAIMRSPQMVSAIV----RTMQN-TNDVETARCTSGTLH 218 (780)
T ss_dssp HHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHHTSHH---HHHHHTTCHHHHHHHH----HHHHH-CCCHHHHHHHHHHHH
T ss_pred HHhCCHHHHHHHHCCCCHHHHHHHHHHHHHHhCCCh---hHHHHHhccChHHHHH----HHHcC-CCCHHHHHHHHHHHH
Confidence 346679999999998899999999998888875321 111111 12122222 23322 247889999999999
Q ss_pred hccCCHHHHHhhcCCHHHHHHHHHHHhcCCCCcchhhhhhhHHhhcccCCc
Q psy4703 289 YLTLDAEVKEALIEDKPALAALVDVASSVKYKNVWNGTQSDALKDVDKAFD 339 (401)
Q Consensus 289 y~~~~~~vke~~~~d~~~l~~l~~~~~~~~~~~~~~~~~~~~~~n~~~~~~ 339 (401)
.++..++.++.+++. ..+..|++++++. +..+.+.++ .+|.||+...+
T Consensus 219 ~Ls~~~~~~~~i~~~-g~I~~Lv~lL~~~-~~~v~~~A~-~aL~nLa~~~~ 266 (780)
T 2z6g_A 219 NLSHHREGLLAIFKS-GGIPALVNMLGSP-VDSVLFHAI-TTLHNLLLHQE 266 (780)
T ss_dssp HHHTSHHHHHHHHHT-THHHHHHHHTTCS-CHHHHHHHH-HHHHHHHHHST
T ss_pred HHhCCchhHHHHHHc-CCHHHHHHHHcCC-CHHHHHHHH-HHHHHHhCCCh
Confidence 999999999888875 8899999999988 778999999 99999987654
No 252
>3l6x_A Catenin delta-1; catenin, armadillo, ARM, JMD, CE adhesion, complex, cell-CELL adhesion, ARVCF, delta-catenin DP120, JAC-1, cell membrane, membrane; 2.40A {Homo sapiens} PDB: 3l6y_A
Probab=94.33 E-value=0.084 Score=54.88 Aligned_cols=154 Identities=18% Similarity=0.216 Sum_probs=100.6
Q ss_pred HHHhhhhHHHHHHHHhhccCchhHHhhHHHHH-----------HHH-HHhcHHHHHHHHcCCChhHHHHHHHhhhhcccc
Q psy4703 177 EMLLKSGVAKQINTLLKCETNEEIYLGEEDFI-----------TSI-IKQGVDILKRLYMSKNENIRVRALVGLCKLGSM 244 (401)
Q Consensus 177 e~~~~e~~v~~L~~ll~~~~~~e~~lA~e~fi-----------~~i-~~~gv~~Lk~l~~s~~d~i~~ralvgLckl~~~ 244 (401)
+.-|++.++..+..+++ +.++++...-..++ ..+ ...|++.|-++++++++.++..|...|..|...
T Consensus 42 ~~~~~~~~i~~LV~~L~-s~~~~~q~~Aa~~L~~La~~~~~~k~~V~~~G~Ip~LV~LL~s~~~~vq~~Aa~AL~nLa~~ 120 (584)
T 3l6x_A 42 PPNWRQPELPEVIAMLG-FRLDAVKSNAAAYLQHLCYRNDKVKTDVRKLKGIPVLVGLLDHPKKEVHLGACGALKNISFG 120 (584)
T ss_dssp CCCCCCCCHHHHHHHTT-CSCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHGGGCSSHHHHHHHHHHHHHHTSS
T ss_pred CCCcccccHHHHHHHHC-CCCHHHHHHHHHHHHHHHcCChHHHHHHHHcCCcHHHHHHHCCCCHHHHHHHHHHHHHHHcc
Confidence 33445566666666666 44555433211111 334 346699999999999999999888888888642
Q ss_pred CCCCCCCCCCCCCchHHHHHHHHhhhcCCCCCchhHHhHHhhhhhccCCHHHHHhhcCCHHHHHHHHHHHh---c-----
Q psy4703 245 GGSDASIRPFADGSTRKLAEACRRFLVNPARDPDIRRWAAEGLAYLTLDAEVKEALIEDKPALAALVDVAS---S----- 316 (401)
Q Consensus 245 gg~d~~~~~~~~~s~~~l~~~~~~~l~~~~~~~~~~~~~~eglay~~~~~~vke~~~~d~~~l~~l~~~~~---~----- 316 (401)
.+.+.-......|..-.|++.+++ ..+.+.++.|+--|..+|..++.|..+++ ..|..|++++. +
T Consensus 121 ~~~~nk~~I~~~GaIp~LV~LL~s-----~~~~~~~e~aa~aL~nLS~~~~~k~~I~~--~alp~Lv~LL~~p~sg~~~~ 193 (584)
T 3l6x_A 121 RDQDNKIAIKNCDGVPALVRLLRK-----ARDMDLTEVITGTLWNLSSHDSIKMEIVD--HALHALTDEVIIPHSGWERE 193 (584)
T ss_dssp SCHHHHHHHHHTTHHHHHHHHHHH-----CCSHHHHHHHHHHHHHHTTSGGGHHHHHH--HTHHHHHHHTHHHHHCCC--
T ss_pred CCHHHHHHHHHcCCHHHHHHHHcC-----CCCHHHHHHHHHHHHHHhCCchhhHHHHh--ccHHHHHHHHhccccccccc
Confidence 111111111123545556665543 23567789999999999999999999993 57999999762 1
Q ss_pred ---------CCCCcchhhhhhhHHhhcccCCc
Q psy4703 317 ---------VKYKNVWNGTQSDALKDVDKAFD 339 (401)
Q Consensus 317 ---------~~~~~~~~~~~~~~~~n~~~~~~ 339 (401)
..+..+.+-+. .+|.||+-.-+
T Consensus 194 ~~~~~k~~~~~d~~V~~nAa-~~L~NLs~~~~ 224 (584)
T 3l6x_A 194 PNEDCKPRHIEWESVLTNTA-GCLRNVSSERS 224 (584)
T ss_dssp --------CCCCHHHHHHHH-HHHHHHTSSCH
T ss_pred ccccccccccccHHHHHHHH-HHHHHHhcCCH
Confidence 11345777777 89999986654
No 253
>3ltj_A Alpharep-4; protein engineering, heat-like repeat, protein binding; 1.80A {Synthetic}
Probab=94.27 E-value=0.87 Score=39.27 Aligned_cols=141 Identities=17% Similarity=0.140 Sum_probs=93.1
Q ss_pred CCChhHHHHHHHHHHHhhhcchhhHHHhhhhHHHHHHHHhhccCchhHHhhHHHHHHHH-HHhcHHHHHHHHcCCChhHH
Q psy4703 153 SAPMDKRVTAVNNLVVLAREMSGAEMLLKSGVAKQINTLLKCETNEEIYLGEEDFITSI-IKQGVDILKRLYMSKNENIR 231 (401)
Q Consensus 153 ~~~~~~~~~a~~~L~~l~~~~~gae~~~~e~~v~~L~~ll~~~~~~e~~lA~e~fi~~i-~~~gv~~Lk~l~~s~~d~i~ 231 (401)
..+...+..+...|...+.. ..+..+..++. +.++.+..+--..+..+ ....++.|..++++.++.++
T Consensus 56 ~~~~~vr~~a~~~L~~~~~~----------~~~~~L~~~l~-d~~~~vr~~a~~aL~~~~~~~~~~~L~~~l~d~~~~vr 124 (201)
T 3ltj_A 56 DEDAWVRRAAADALGQIGDE----------RAVEPLIKALK-DEDGWVRQSAAVALGQIGDERAVEPLIKALKDEDWFVR 124 (201)
T ss_dssp CSSHHHHHHHHHHHHHHCCG----------GGHHHHHHHTT-CSSHHHHHHHHHHHHHHCCGGGHHHHHHHTTCSSHHHH
T ss_pred CCCHHHHHHHHHHHHhhCCH----------HHHHHHHHHHc-CCCHHHHHHHHHHHHHhCcHHHHHHHHHHHcCCCHHHH
Confidence 34556666676666655542 34556666666 55666644332222222 23468888889988889999
Q ss_pred HHHHHhhhhccccCCCCCCCCCCCCCchHHHHHHHHhhhcCCCCCchhHHhHHhhhhhccCCHHHHHhhcCCHHHHHHHH
Q psy4703 232 VRALVGLCKLGSMGGSDASIRPFADGSTRKLAEACRRFLVNPARDPDIRRWAAEGLAYLTLDAEVKEALIEDKPALAALV 311 (401)
Q Consensus 232 ~ralvgLckl~~~gg~d~~~~~~~~~s~~~l~~~~~~~l~~~~~~~~~~~~~~eglay~~~~~~vke~~~~d~~~l~~l~ 311 (401)
..|+..|..++.. +. ......++.. .++..|..|++.|..+ .++..+..|.
T Consensus 125 ~~a~~aL~~~~~~------------~~----~~~L~~~l~d--~~~~vr~~A~~aL~~~-----------~~~~~~~~L~ 175 (201)
T 3ltj_A 125 IAAAFALGEIGDE------------RA----VEPLIKALKD--EDGWVRQSAADALGEI-----------GGERVRAAME 175 (201)
T ss_dssp HHHHHHHHHHTCG------------GG----HHHHHHHTTC--SSHHHHHHHHHHHHHH-----------CSHHHHHHHH
T ss_pred HHHHHHHHHhCCH------------HH----HHHHHHHHcC--CCHHHHHHHHHHHHHh-----------CchhHHHHHH
Confidence 9999999888631 12 2333444533 3678999999999987 4778888888
Q ss_pred HHHhcCCCCcchhhhhhhHHhhcc
Q psy4703 312 DVASSVKYKNVWNGTQSDALKDVD 335 (401)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~n~~ 335 (401)
+++.+. +..+-..+. ..+.++.
T Consensus 176 ~~l~d~-~~~vr~~A~-~aL~~l~ 197 (201)
T 3ltj_A 176 KLAETG-TGFARKVAV-NYLETHK 197 (201)
T ss_dssp HHHHHC-CHHHHHHHH-HHHHHCC
T ss_pred HHHhCC-CHHHHHHHH-HHHHHHH
Confidence 888776 666777666 6666654
No 254
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=94.26 E-value=0.71 Score=46.85 Aligned_cols=91 Identities=13% Similarity=0.112 Sum_probs=40.1
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHhhcC-CCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-CCCHHHHHHHHHH
Q psy4703 13 KESGNSAFKQGDYETALDFYTKALKVTA-EESHERATCLKNRAAVYLKQNQNDKVIEDCSKSLEIV-PDDPKALFRRCQA 90 (401)
Q Consensus 13 ~~~Gn~~~~~g~y~eAi~~y~~Al~l~~-p~~~~~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~ld-P~~~kA~~~~a~a 90 (401)
...-..+.+.|++++|...|.+..+..- | +...|..+-.+|.+.|+.++|...+++..+.. .-+...|..+-.+
T Consensus 109 n~lI~~~~~~g~~~~A~~l~~~M~~~g~~P----d~~tyn~lI~~~~~~g~~~~A~~l~~~M~~~G~~Pd~~ty~~Li~~ 184 (501)
T 4g26_A 109 TNGARLAVAKDDPEMAFDMVKQMKAFGIQP----RLRSYGPALFGFCRKGDADKAYEVDAHMVESEVVPEEPELAALLKV 184 (501)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHTTCCC----CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCCCCHHHHHHHHHH
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHcCCCC----ccceehHHHHHHHHCCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHH
Confidence 3334444444555555555544443320 2 23344444444444555555555544444332 1133344444444
Q ss_pred HHHcCCHHHHHHHHHHH
Q psy4703 91 YEAIGKFEEAYTDAKHI 107 (401)
Q Consensus 91 ~~~lg~~eeA~~~~~ka 107 (401)
|.+.|++++|.+.+++.
T Consensus 185 ~~~~g~~d~A~~ll~~M 201 (501)
T 4g26_A 185 SMDTKNADKVYKTLQRL 201 (501)
T ss_dssp HHHTTCHHHHHHHHHHH
T ss_pred HhhCCCHHHHHHHHHHH
Confidence 55555555555444443
No 255
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=94.17 E-value=0.12 Score=55.16 Aligned_cols=59 Identities=12% Similarity=0.162 Sum_probs=52.2
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHH
Q psy4703 49 CLKNRAAVYLKQNQNDKVIEDCSKSLEIVPDDPKALFRRCQAYEAIGKFEEAYTDAKHI 107 (401)
Q Consensus 49 ~~~n~a~~y~klg~y~~Ai~~~~kAL~ldP~~~kA~~~~a~a~~~lg~~eeA~~~~~ka 107 (401)
++.--+.-++..|+|+-|+....+|+.+-|.....|++++.+|..+|+|+.|+-.+.-+
T Consensus 339 LL~~Qa~FLl~K~~~elAL~~Ak~AV~~aPseF~tW~~La~vYi~l~d~e~ALLtLNSc 397 (754)
T 4gns_B 339 LLNIQTNFLLNRGDYELALGVSNTSTELALDSFESWYNLARCHIKKEEYEKALFAINSM 397 (754)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHTTCHHHHHHHHHHS
T ss_pred HHHHHHHHHhccCcHHHHHHHHHHHHhcCchhhHHHHHHHHHHHHhccHHHHHHHHhcC
Confidence 44445666778899999999999999999999999999999999999999999776654
No 256
>3ltm_A Alpha-REP4; protein engineering, heat-like repeat, protein binding; HET: 1PE 12P; 2.15A {Synthetic}
Probab=94.09 E-value=0.64 Score=40.52 Aligned_cols=141 Identities=21% Similarity=0.190 Sum_probs=94.5
Q ss_pred CCChhHHHHHHHHHHHhhhcchhhHHHhhhhHHHHHHHHhhccCchhHHhhHHHHHHHH-HHhcHHHHHHHHcCCChhHH
Q psy4703 153 SAPMDKRVTAVNNLVVLAREMSGAEMLLKSGVAKQINTLLKCETNEEIYLGEEDFITSI-IKQGVDILKRLYMSKNENIR 231 (401)
Q Consensus 153 ~~~~~~~~~a~~~L~~l~~~~~gae~~~~e~~v~~L~~ll~~~~~~e~~lA~e~fi~~i-~~~gv~~Lk~l~~s~~d~i~ 231 (401)
.++...+..++..|...+.. ..+..+..++. +.++.+...--..+..+ ....++.|..++++.++.++
T Consensus 30 ~~~~~vR~~A~~~L~~~~~~----------~~~~~L~~~l~-~~~~~vr~~a~~aL~~~~~~~~~~~L~~~l~~~~~~vr 98 (211)
T 3ltm_A 30 DDSYYVRRAAAYALGKIGDE----------RAVEPLIKALK-DEDAWVRRAAADALGQIGDERAVEPLIKALKDEDGWVR 98 (211)
T ss_dssp CSSHHHHHHHHHHHHHHCCG----------GGHHHHHHHTT-CSCHHHHHHHHHHHHHHCCGGGHHHHHHHTTCSSHHHH
T ss_pred CCCHHHHHHHHHHHHHhCCc----------cHHHHHHHHHc-CCCHHHHHHHHHHHHhhCCHHHHHHHHHHHcCCCHHHH
Confidence 45566677777777665542 34666677776 55666633322222222 23568889999998999999
Q ss_pred HHHHHhhhhccccCCCCCCCCCCCCCchHHHHHHHHhhhcCCCCCchhHHhHHhhhhhccCCHHHHHhhcCCHHHHHHHH
Q psy4703 232 VRALVGLCKLGSMGGSDASIRPFADGSTRKLAEACRRFLVNPARDPDIRRWAAEGLAYLTLDAEVKEALIEDKPALAALV 311 (401)
Q Consensus 232 ~ralvgLckl~~~gg~d~~~~~~~~~s~~~l~~~~~~~l~~~~~~~~~~~~~~eglay~~~~~~vke~~~~d~~~l~~l~ 311 (401)
..|+..|++++.. +. .....++| ...++..|..|++.|+.+. ++..+..|+
T Consensus 99 ~~a~~aL~~~~~~------------~~----~~~L~~~l--~d~~~~vr~~a~~aL~~~~-----------~~~~~~~L~ 149 (211)
T 3ltm_A 99 QSAAVALGQIGDE------------RA----VEPLIKAL--KDEDWFVRIAAAFALGEIG-----------DERAVEPLI 149 (211)
T ss_dssp HHHHHHHHHHCCG------------GG----HHHHHHHT--TCSSHHHHHHHHHHHHHHC-----------CGGGHHHHH
T ss_pred HHHHHHHHHhCcH------------HH----HHHHHHHH--hCCCHHHHHHHHHHHHHcC-----------CHHHHHHHH
Confidence 9999999988631 11 23333444 2456789999999999873 456778888
Q ss_pred HHHhcCCCCcchhhhhhhHHhhcc
Q psy4703 312 DVASSVKYKNVWNGTQSDALKDVD 335 (401)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~n~~ 335 (401)
+++++. +..+-..++ ..+.++.
T Consensus 150 ~~l~d~-~~~vr~~a~-~aL~~~~ 171 (211)
T 3ltm_A 150 KALKDE-DGWVRQSAA-DALGEIG 171 (211)
T ss_dssp HHTTCS-SHHHHHHHH-HHHHHHC
T ss_pred HHHcCC-CHHHHHHHH-HHHHHhC
Confidence 888765 667888888 7777775
No 257
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=94.02 E-value=0.44 Score=47.00 Aligned_cols=97 Identities=10% Similarity=0.002 Sum_probs=77.8
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHhhcC--CCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC---CCCH----HHH
Q psy4703 14 ESGNSAFKQGDYETALDFYTKALKVTA--EESHERATCLKNRAAVYLKQNQNDKVIEDCSKSLEIV---PDDP----KAL 84 (401)
Q Consensus 14 ~~Gn~~~~~g~y~eAi~~y~~Al~l~~--p~~~~~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~ld---P~~~----kA~ 84 (401)
..|..|+..|+|.+|+..+.+..+-.. .++.....++......|..++++.++...+++|.... +.++ ...
T Consensus 104 kL~~l~~~~~~y~~a~~~i~~l~~~~~~~dd~~~llev~lle~~~~~~~~n~~k~k~~l~~a~~~~~ai~~~p~i~a~i~ 183 (394)
T 3txn_A 104 RLIALYFDTALYTEALALGAQLLRELKKLDDKNLLVEVQLLESKTYHALSNLPKARAALTSARTTANAIYCPPKVQGALD 183 (394)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHTTSSCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHH
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhccCCCCHHHHHHHH
Confidence 679999999999999999999887652 1235677888899999999999999999999987653 1233 234
Q ss_pred HHHHHHHH-HcCCHHHHHHHHHHHHhh
Q psy4703 85 FRRCQAYE-AIGKFEEAYTDAKHIHRV 110 (401)
Q Consensus 85 ~~~a~a~~-~lg~~eeA~~~~~kal~l 110 (401)
..-|..++ ..++|..|..+|-.+++-
T Consensus 184 ~~~Gi~~l~~~rdyk~A~~~F~eaf~~ 210 (394)
T 3txn_A 184 LQSGILHAADERDFKTAFSYFYEAFEG 210 (394)
T ss_dssp HHHHHHHHHTTSCHHHHHHHHHHHHHH
T ss_pred HHhhHHHHHhccCHHHHHHHHHHHHhc
Confidence 45588888 899999999999888743
No 258
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=94.00 E-value=0.15 Score=54.45 Aligned_cols=62 Identities=19% Similarity=0.207 Sum_probs=55.1
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcCCCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHH
Q psy4703 8 DYNKLKESGNSAFKQGDYETALDFYTKALKVTAEESHERATCLKNRAAVYLKQNQNDKVIEDCSKS 73 (401)
Q Consensus 8 ~a~~l~~~Gn~~~~~g~y~eAi~~y~~Al~l~~p~~~~~~~~~~n~a~~y~klg~y~~Ai~~~~kA 73 (401)
.+..+..++..+..+|+|+-|+.+-++|+... |. ....|+.++.||..+|+|+.|+-..+.+
T Consensus 336 ~~~LL~~Qa~FLl~K~~~elAL~~Ak~AV~~a-Ps---eF~tW~~La~vYi~l~d~e~ALLtLNSc 397 (754)
T 4gns_B 336 MSDLLNIQTNFLLNRGDYELALGVSNTSTELA-LD---SFESWYNLARCHIKKEEYEKALFAINSM 397 (754)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-SS---CHHHHHHHHHHHHHTTCHHHHHHHHHHS
T ss_pred chHHHHHHHHHHhccCcHHHHHHHHHHHHhcC-ch---hhHHHHHHHHHHHHhccHHHHHHHHhcC
Confidence 45567788999999999999999999999999 76 8999999999999999999999765543
No 259
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=93.84 E-value=0.29 Score=49.79 Aligned_cols=79 Identities=13% Similarity=0.075 Sum_probs=68.8
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCccHHHHHHHHHHH
Q psy4703 49 CLKNRAAVYLKQNQNDKVIEDCSKSLEIVPDDPKALFRRCQAYEAIGKFEEAYTDAKHIHRVEPTNKAIQPVLSRLFAI 127 (401)
Q Consensus 49 ~~~n~a~~y~klg~y~~Ai~~~~kAL~ldP~~~kA~~~~a~a~~~lg~~eeA~~~~~kal~l~P~~~~~~~~L~~l~~~ 127 (401)
.+..+|....-...+..|..+|.+|+.+.|++...|..+|.+....|+.-+|+.+|-+++......+.+..+|..+...
T Consensus 154 ~l~~LGDL~RY~~~~~~A~~~Y~~A~~~~P~~G~~~nqLavla~~~~~~l~a~y~y~rsl~~~~Pf~~a~~nL~~~f~~ 232 (497)
T 1ya0_A 154 CLVHLGDIARYRNQTSQAESYYRHAAQLVPSNGQPYNQLAILASSKGDHLTTIFYYCRSIAVKFPFPAASTNLQKALSK 232 (497)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTBSHHHHHHHHHHHHTTCHHHHHHHHHHHHSSSBCCHHHHHHHHHHHHH
T ss_pred HHHHcccHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHhcccccHHHHHHHHHHHhcCCCChhHHHHHHHHHHH
Confidence 4455677777777889999999999999999999999999999999999999999999998877788888888766554
No 260
>1jdh_A Beta-catenin; beta-catenin, protein-protein complex, transcription; 1.90A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qz7_A 1g3j_A 1th1_A* 1i7w_A* 1i7x_A 1jpp_A 1m1e_A 1v18_A* 3oux_A 3ouw_A 1jpw_A 3tx7_A* 2gl7_A 1t08_A 1luj_A 2bct_A 3bct_A* 3ifq_A* 3sla_A 3sl9_A
Probab=93.83 E-value=0.59 Score=46.61 Aligned_cols=175 Identities=14% Similarity=0.136 Sum_probs=110.4
Q ss_pred CCChhHHHHHHHHHHHhhhcchhhHHHhhh-hHHHHHHHHhhccCchhHHhhH----------HHHHHHH-HHhcHHHHH
Q psy4703 153 SAPMDKRVTAVNNLVVLAREMSGAEMLLKS-GVAKQINTLLKCETNEEIYLGE----------EDFITSI-IKQGVDILK 220 (401)
Q Consensus 153 ~~~~~~~~~a~~~L~~l~~~~~gae~~~~e-~~v~~L~~ll~~~~~~e~~lA~----------e~fi~~i-~~~gv~~Lk 220 (401)
..+...+..+...|..+...+.....++.. +++..+..++..+.++++...- .+....+ ..++++.|-
T Consensus 28 ~~~~~v~~~A~~~L~~l~~~~~~~~~~~~~~~~i~~Lv~~L~~~~~~~~~~~a~~~L~~ls~~~~~~~~i~~~g~i~~L~ 107 (529)
T 1jdh_A 28 DEDQVVVNKAAVMVHQLSKKEASRHAIMRSPQMVSAIVRTMQNTNDVETARCTAGTLHNLSHHREGLLAIFKSGGIPALV 107 (529)
T ss_dssp CSCHHHHHHHHHHHHHHHTSHHHHHHHHTCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHTTSHHHHHHHHHTTHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHcCCccHHHHHhCcchHHHHHHHHhcCCCHHHHHHHHHHHHHHHcCchhHHHHHHcCCHHHHH
Confidence 345666777777777776655444455443 6688888887623355553321 1112223 446799999
Q ss_pred HHHcCCChhHHHHHHHhhhhccccCCCCCCCCCC-CCCchHHHHHHHHhhhcCCCCCchhHHhHHhhhhhccC-CHHHHH
Q psy4703 221 RLYMSKNENIRVRALVGLCKLGSMGGSDASIRPF-ADGSTRKLAEACRRFLVNPARDPDIRRWAAEGLAYLTL-DAEVKE 298 (401)
Q Consensus 221 ~l~~s~~d~i~~ralvgLckl~~~gg~d~~~~~~-~~~s~~~l~~~~~~~l~~~~~~~~~~~~~~eglay~~~-~~~vke 298 (401)
++++++++.++..|+..|..+..... .....+ ..|- ....-++|.. .+.+.+..++..|.-++. +++.+.
T Consensus 108 ~lL~~~~~~v~~~a~~~L~~l~~~~~--~~~~~i~~~g~----i~~L~~ll~~--~~~~~~~~~~~~L~~la~~~~~~~~ 179 (529)
T 1jdh_A 108 KMLGSPVDSVLFYAITTLHNLLLHQE--GAKMAVRLAGG----LQKMVALLNK--TNVKFLAITTDCLQILAYGNQESKL 179 (529)
T ss_dssp HHTTCSCHHHHHHHHHHHHHHHHHCT--THHHHHHHHTH----HHHHHHGGGC--CCHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHcCCCHHHHHHHHHHHHHHhcCCc--chHHHHHHcCC----HHHHHHHHhc--CCHHHHHHHHHHHHHHHhCCHHHHH
Confidence 99999889998888888877765321 111000 0122 2233344433 356778888888888876 589998
Q ss_pred hhcCCHHHHHHHHHHHhcCCCCcchhhhhhhHHhhcccC
Q psy4703 299 ALIEDKPALAALVDVASSVKYKNVWNGTQSDALKDVDKA 337 (401)
Q Consensus 299 ~~~~d~~~l~~l~~~~~~~~~~~~~~~~~~~~~~n~~~~ 337 (401)
.+++. ..+..|++++++.....+.+.++ .++.||+..
T Consensus 180 ~i~~~-~~i~~L~~ll~~~~~~~~~~~a~-~~L~~l~~~ 216 (529)
T 1jdh_A 180 IILAS-GGPQALVNIMRTYTYEKLLWTTS-RVLKVLSVC 216 (529)
T ss_dssp HHHHT-THHHHHHHHHHHCCCHHHHHHHH-HHHHHHTTS
T ss_pred HHHHC-CCHHHHHHHHHhCChHHHHHHHH-HHHHHHhcC
Confidence 88765 66899999998774444666666 778888753
No 261
>3ul1_B Importin subunit alpha-2; arm repeat, armadillo repeat, nuclear transport, nuclear LOC signal binding, importin beta binding; 1.90A {Mus musculus} PDB: 3ukx_B 3uky_B 3ukz_B 3ukw_B 3ul0_B 3oqs_A 3rz9_A 3rzx_A 3uvu_A 1q1s_C 1q1t_C 3knd_A 1ejy_I 1iq1_C 1ejl_I 1pjn_B 1pjm_B 3q5u_A 3fey_C 3fex_C ...
Probab=93.82 E-value=1.3 Score=44.63 Aligned_cols=181 Identities=14% Similarity=0.141 Sum_probs=109.1
Q ss_pred hhcCCCChhHHHHHHHHHHHhhhc-chhhHHHhhhhHHHHHHHHhhccCchhHHhh----HH-------HHHHHH-HHhc
Q psy4703 149 VFDTSAPMDKRVTAVNNLVVLARE-MSGAEMLLKSGVAKQINTLLKCETNEEIYLG----EE-------DFITSI-IKQG 215 (401)
Q Consensus 149 ~~~~~~~~~~~~~a~~~L~~l~~~-~~gae~~~~e~~v~~L~~ll~~~~~~e~~lA----~e-------~fi~~i-~~~g 215 (401)
++..+.+.+.+..++..|.-+... +.-...+...|++..+..+++ +.++++... .. .+-..+ ..++
T Consensus 108 lL~~~~~~~lq~~Aa~aL~nias~~~e~~~~vv~~GaIp~Lv~lL~-s~~~~v~e~A~~aL~nLa~d~~~~r~~v~~~G~ 186 (510)
T 3ul1_B 108 FLGKTDCSPIQFESAWALTNIASGTSEQTKAVVDGGAIPAFISLLA-SPHAHISEQAVWALGNIAGDGSAFRDLVIKHGA 186 (510)
T ss_dssp HTTCTTCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHTT-CSCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTC
T ss_pred HHCCCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHCCCHHHHHHHHc-CCCHHHHHHHHHHHHHHHhCCHHHHHHHHHcCC
Confidence 344444455556666666555432 233445556688999999998 666666332 11 111233 3456
Q ss_pred HHHHHHHHcCCChh-----HHHHHHHhhhhccccCCCCCCCCCCCCCchHHHHHHHHhhhcCCCCCchhHHhHHhhhhhc
Q psy4703 216 VDILKRLYMSKNEN-----IRVRALVGLCKLGSMGGSDASIRPFADGSTRKLAEACRRFLVNPARDPDIRRWAAEGLAYL 290 (401)
Q Consensus 216 v~~Lk~l~~s~~d~-----i~~ralvgLckl~~~gg~d~~~~~~~~~s~~~l~~~~~~~l~~~~~~~~~~~~~~eglay~ 290 (401)
++.|-.++.+.+.. +...+...|+.+... .+... . -.....+....-++| ...+++.+.+|+..|+|+
T Consensus 187 i~~Ll~lL~~~~~~~~~~~~~~~a~~~L~nl~~~--~~~~~-~--~~~~~~~lp~L~~LL--~~~~~~v~~~A~~aL~~L 259 (510)
T 3ul1_B 187 IDPLLALLAVPDLSTLACGYLRNLTWTLSNLCRN--KNPAP-P--LDAVEQILPTLVRLL--HHNDPEVLADSCWAISYL 259 (510)
T ss_dssp HHHHHHHTCSSCGGGSCHHHHHHHHHHHHHHHCC--CSSCC-C--HHHHHHHHHHHHHHT--TCSCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHhccchhhhHHHHHHHHHHHHHHhhc--ccchh-H--HHHHHhHHHHHHHHH--hcCCHHHHHHHHHHHHHH
Confidence 88999998754432 112333344444331 11110 0 011122333333444 345778999999999999
Q ss_pred cCCHHHHHhhcCCHHHHHHHHHHHhcCCCCcchhhhhhhHHhhcccCCc
Q psy4703 291 TLDAEVKEALIEDKPALAALVDVASSVKYKNVWNGTQSDALKDVDKAFD 339 (401)
Q Consensus 291 ~~~~~vke~~~~d~~~l~~l~~~~~~~~~~~~~~~~~~~~~~n~~~~~~ 339 (401)
+-.++-+-+++.+...+..|++++.+. +..+...++ .++.||+..-+
T Consensus 260 ~~~~~~~~~~i~~~g~i~~Lv~lL~~~-~~~v~~~al-~aL~nl~~~~~ 306 (510)
T 3ul1_B 260 TDGPNERIEMVVKKGVVPQLVKLLGAT-ELPIVTPAL-RAIGNIVTGTD 306 (510)
T ss_dssp TSSCHHHHHHHHTTTCHHHHHHHHTCS-CHHHHHHHH-HHHHHHTTSCH
T ss_pred hhchhhhHHHHHhcccchhhhhhhcCC-ChhhhhHHH-HHHHHhhcCCH
Confidence 988776666777778899999999887 777888888 88999875544
No 262
>4b8j_A Importin subunit alpha-1A; transport protein, nuclear localization signal; 2.00A {Oryza sativa japonica group} PDB: 4b8o_A 2yns_A 4b8p_A
Probab=93.73 E-value=0.095 Score=52.96 Aligned_cols=175 Identities=18% Similarity=0.185 Sum_probs=109.1
Q ss_pred CChhHHHHHHHHHHHhhh-c-chhhHHHhhhhHHHHHHHHhhccCc-hhHHhhH-----------HHHHHHH-HHhcHHH
Q psy4703 154 APMDKRVTAVNNLVVLAR-E-MSGAEMLLKSGVAKQINTLLKCETN-EEIYLGE-----------EDFITSI-IKQGVDI 218 (401)
Q Consensus 154 ~~~~~~~~a~~~L~~l~~-~-~~gae~~~~e~~v~~L~~ll~~~~~-~e~~lA~-----------e~fi~~i-~~~gv~~ 218 (401)
.+.+.+..++..+..+.. . ......+...+++..+..+++ ..+ +++...- .+....+ ..++++.
T Consensus 86 ~~~~~~~~A~~~L~~l~s~~~~~~~~~~~~~g~v~~Lv~lL~-~~~~~~v~~~A~~~L~~l~~~~~~~~~~~~~~g~i~~ 164 (528)
T 4b8j_A 86 DDNNLQLEATTQFRKLLSIERSPPIEEVIQSGVVPRFVQFLT-REDFPQLQFEAAWALTNIASGTSENTKVVIDHGAVPI 164 (528)
T ss_dssp SCHHHHHHHHHHHHHHHTCSSSCCHHHHHHTTCHHHHHHHHT-CTTCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHH
T ss_pred CCHHHHHHHHHHHHHHhcCCCCchHHHHHHCCCHHHHHHHhC-CCCCHHHHHHHHHHHHHHhCCCHHHHHHHHhCCcHHH
Confidence 345566666666644422 2 233455556778888888887 443 6653321 1122233 3357999
Q ss_pred HHHHHcCCChhHHHHHHHhhhhccccCCCCCCCCCCCCCchHHHHHHHHhhhcCCCCCchhHHhHHhhhhhccCC-HHHH
Q psy4703 219 LKRLYMSKNENIRVRALVGLCKLGSMGGSDASIRPFADGSTRKLAEACRRFLVNPARDPDIRRWAAEGLAYLTLD-AEVK 297 (401)
Q Consensus 219 Lk~l~~s~~d~i~~ralvgLckl~~~gg~d~~~~~~~~~s~~~l~~~~~~~l~~~~~~~~~~~~~~eglay~~~~-~~vk 297 (401)
|-.++++.++.++..|+..|+.+...+ ...-......|....|. .+| ....+++.++.|+..|++++-. |...
T Consensus 165 L~~lL~~~~~~v~~~a~~aL~~l~~~~-~~~~~~i~~~g~l~~Ll----~lL-~~~~~~~v~~~a~~~L~~L~~~~~~~~ 238 (528)
T 4b8j_A 165 FVKLLGSSSDDVREQAVWALGNVAGDS-PKCRDLVLANGALLPLL----AQL-NEHTKLSMLRNATWTLSNFCRGKPQPS 238 (528)
T ss_dssp HHHHTTCSCHHHHHHHHHHHHHHHHTC-HHHHHHHHHTTCHHHHH----HTC-CTTCCHHHHHHHHHHHHHHHCSSSCCC
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHhCCC-hhhHHHHHHCCcHHHHH----HHH-hcCCCHHHHHHHHHHHHHHHcCCCCCc
Confidence 999999989999998888888886421 11000000112222222 222 2345778999999999999866 3333
Q ss_pred HhhcCCHHHHHHHHHHHhcCCCCcchhhhhhhHHhhcccCCc
Q psy4703 298 EALIEDKPALAALVDVASSVKYKNVWNGTQSDALKDVDKAFD 339 (401)
Q Consensus 298 e~~~~d~~~l~~l~~~~~~~~~~~~~~~~~~~~~~n~~~~~~ 339 (401)
...+ ...+..|+.++.+. +..+...++ .+|.||+..-+
T Consensus 239 ~~~~--~~~l~~L~~lL~~~-~~~v~~~a~-~aL~~l~~~~~ 276 (528)
T 4b8j_A 239 FEQT--RPALPALARLIHSN-DEEVLTDAC-WALSYLSDGTN 276 (528)
T ss_dssp HHHH--TTHHHHHHHHTTCC-CHHHHHHHH-HHHHHHTSSCH
T ss_pred HHHH--HHHHHHHHHHHCCC-CHHHHHHHH-HHHHHHHcCCH
Confidence 3332 56788999999877 778888888 99999996554
No 263
>1zbp_A Hypothetical protein VPA1032; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.40A {Vibrio parahaemolyticus} SCOP: e.61.1.1
Probab=93.69 E-value=0.36 Score=45.01 Aligned_cols=70 Identities=17% Similarity=0.113 Sum_probs=60.1
Q ss_pred HHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCccHHHHHHHH
Q psy4703 55 AVYLKQNQNDKVIEDCSKSLEIVPDDPKALFRRCQAYEAIGKFEEAYTDAKHIHRVEPTNKAIQPVLSRL 124 (401)
Q Consensus 55 ~~y~klg~y~~Ai~~~~kAL~ldP~~~kA~~~~a~a~~~lg~~eeA~~~~~kal~l~P~~~~~~~~L~~l 124 (401)
...++.|+.++|++.+...++.+|.|+.....+-+.++-.|+|+.|...++.+.+++|........++.+
T Consensus 5 ~~ll~~g~L~~al~~~~~~VR~~P~da~~R~~LfqLLcv~G~w~RA~~QL~~~a~l~p~~~~~a~~yr~l 74 (273)
T 1zbp_A 5 KNALSEGQLQQALELLIEAIKASPKDASLRSSFIELLCIDGDFERADEQLMQSIKLFPEYLPGASQLRHL 74 (273)
T ss_dssp HHHTTTTCHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCGGGHHHHHHHHHH
T ss_pred HHHHhCCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCchhhHHHHHHHHH
Confidence 3456789999999999999999999999999999999999999999999999999999875554444433
No 264
>2z6g_A B-catenin; FULL-length, beta-catenin, cell adhesion; 3.40A {Danio rerio}
Probab=93.66 E-value=1.2 Score=47.63 Aligned_cols=153 Identities=16% Similarity=0.140 Sum_probs=85.1
Q ss_pred CCChhHHHHHHHHHHHhhhcchhhHHHhhhhHHHHHHHHhhccCchhHHhh-H---HHH-------HHHH-HHhcHHHHH
Q psy4703 153 SAPMDKRVTAVNNLVVLAREMSGAEMLLKSGVAKQINTLLKCETNEEIYLG-E---EDF-------ITSI-IKQGVDILK 220 (401)
Q Consensus 153 ~~~~~~~~~a~~~L~~l~~~~~gae~~~~e~~v~~L~~ll~~~~~~e~~lA-~---e~f-------i~~i-~~~gv~~Lk 220 (401)
..+.+.+..++..|..+.........+...+++..|..+++ +.++.+... . .+. ...+ ..++++.|-
T Consensus 204 ~~d~~vr~~Aa~aL~~Ls~~~~~~~~i~~~g~I~~Lv~lL~-~~~~~v~~~A~~aL~nLa~~~~~~~~~v~~~g~v~~Lv 282 (780)
T 2z6g_A 204 TNDVETARCTSGTLHNLSHHREGLLAIFKSGGIPALVNMLG-SPVDSVLFHAITTLHNLLLHQEGAKMAVRLAGGLQKMV 282 (780)
T ss_dssp CCCHHHHHHHHHHHHHHHTSHHHHHHHHHTTHHHHHHHHTT-CSCHHHHHHHHHHHHHHHHHSTTHHHHHHHTTHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHhCCchhHHHHHHcCCHHHHHHHHc-CCCHHHHHHHHHHHHHHhCCChhhHHHHHHcCCHHHHH
Confidence 34677788888888777766556667777788999999998 556665332 1 111 1233 346788999
Q ss_pred HHHcCCChhHHHHHHHhhhhccccCCCCCCCCC-CCCCchHHHHHHHHhhhcCCCCCchhHHhHHhhhhhccCCHHHHHh
Q psy4703 221 RLYMSKNENIRVRALVGLCKLGSMGGSDASIRP-FADGSTRKLAEACRRFLVNPARDPDIRRWAAEGLAYLTLDAEVKEA 299 (401)
Q Consensus 221 ~l~~s~~d~i~~ralvgLckl~~~gg~d~~~~~-~~~~s~~~l~~~~~~~l~~~~~~~~~~~~~~eglay~~~~~~vke~ 299 (401)
.++++.+..++..++..|+.+... .+..... ...|....|.+.++ ...+...+..++.-|..++..++.+..
T Consensus 283 ~lL~~~~~~v~~~a~~aL~~La~~--~~e~~~~i~~~~~i~~Lv~lL~-----~~~~~~~~~~a~~aL~~Ls~~~~~~~~ 355 (780)
T 2z6g_A 283 ALLNKTNVKFLAITTDCLQILAYG--NQESKLIILASGGPQALVNIMR-----TYTYEKLLWTTSRVLKVLSVCSSNKPA 355 (780)
T ss_dssp HGGGCCCHHHHHHHHHHHHHHHTT--CHHHHHHHHTTTHHHHHHHHHT-----TCCCHHHHHHHHHHHHHHHTSTTHHHH
T ss_pred HHHhcCCHHHHHHHHHHHHHHhcC--ChHHHHHHHHcCCHHHHHHHHh-----cCCHHHHHHHHHHHHHHhhcChHHHHH
Confidence 999887766655554455544431 1111101 11233334444433 122222333456667777777777666
Q ss_pred hcCCHHHHHHHHHHH
Q psy4703 300 LIEDKPALAALVDVA 314 (401)
Q Consensus 300 ~~~d~~~l~~l~~~~ 314 (401)
+++. ..+..|+.++
T Consensus 356 i~~~-g~l~~Ll~lL 369 (780)
T 2z6g_A 356 IVEA-GGMQALGLHL 369 (780)
T ss_dssp HHHT-THHHHHGGGT
T ss_pred HHHh-chHHHHHHHH
Confidence 5432 2334444433
No 265
>1wa5_B Importin alpha subunit; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1un0_A 2c1t_A 1bk5_A 1ee5_A 1bk6_A 1ee4_A
Probab=93.60 E-value=0.34 Score=48.94 Aligned_cols=180 Identities=14% Similarity=0.117 Sum_probs=113.8
Q ss_pred hhcCCCChhHHHHHHHHHHHhhhcchh-hHHHhhhhHHHHHHHHhhccCchhHHhhH----HHHH-------HH-HHHhc
Q psy4703 149 VFDTSAPMDKRVTAVNNLVVLAREMSG-AEMLLKSGVAKQINTLLKCETNEEIYLGE----EDFI-------TS-IIKQG 215 (401)
Q Consensus 149 ~~~~~~~~~~~~~a~~~L~~l~~~~~g-ae~~~~e~~v~~L~~ll~~~~~~e~~lA~----e~fi-------~~-i~~~g 215 (401)
++..+.+...+..++..|..+...... ...+...+++..+..+++ +.++++...- ..+. .. +..++
T Consensus 138 ~L~~~~~~~v~~~A~~~L~~l~~~~~~~~~~~~~~g~i~~Lv~lL~-~~~~~vr~~A~~aL~~l~~~~~~~~~~~~~~~~ 216 (530)
T 1wa5_B 138 FMRENQPEMLQLEAAWALTNIASGTSAQTKVVVDADAVPLFIQLLY-TGSVEVKEQAIWALGNVAGDSTDYRDYVLQCNA 216 (530)
T ss_dssp TTSTTSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTCHHHHHHHHH-HCCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTC
T ss_pred HhCCCCCHHHHHHHHHHHHHHhCCCHHHHHHHHHCCCHHHHHHHHc-CCCHHHHHHHHHHHHHHhCCCccchHHHHHcCc
Confidence 333333566777777777766664332 344445677888888888 5566663321 1111 22 23467
Q ss_pred HHHHHHHHcCCChhHHHHHHHhhhhccccCCCCCCCCCCCCCchHHHHHHHHhhhcCCCCCchhHHhHHhhhhhccCC-H
Q psy4703 216 VDILKRLYMSKNENIRVRALVGLCKLGSMGGSDASIRPFADGSTRKLAEACRRFLVNPARDPDIRRWAAEGLAYLTLD-A 294 (401)
Q Consensus 216 v~~Lk~l~~s~~d~i~~ralvgLckl~~~gg~d~~~~~~~~~s~~~l~~~~~~~l~~~~~~~~~~~~~~eglay~~~~-~ 294 (401)
++.|-.++.+.+..++..|+..|+.+......... ... ...+...+-++|. ..+++.+..|+..|.+++-. +
T Consensus 217 l~~L~~ll~~~~~~v~~~a~~~L~~L~~~~~~~~~-~~~----~~~~l~~L~~lL~--~~d~~v~~~a~~~L~~L~~~~~ 289 (530)
T 1wa5_B 217 MEPILGLFNSNKPSLIRTATWTLSNLCRGKKPQPD-WSV----VSQALPTLAKLIY--SMDTETLVDACWAISYLSDGPQ 289 (530)
T ss_dssp HHHHHHGGGSCCHHHHHHHHHHHHHHHCCSSSCCC-HHH----HGGGHHHHHHHTT--CCCHHHHHHHHHHHHHHHSSCH
T ss_pred HHHHHHHhccCCHHHHHHHHHHHHHHhCCCCCCCc-HHH----HHhHHHHHHHHHc--CCCHHHHHHHHHHHHHHhCCCH
Confidence 99999999888888887777777777653211110 001 1122333334443 23678899999999999964 5
Q ss_pred HHHHhhcCCHHHHHHHHHHHhcCCCCcchhhhhhhHHhhcccCCc
Q psy4703 295 EVKEALIEDKPALAALVDVASSVKYKNVWNGTQSDALKDVDKAFD 339 (401)
Q Consensus 295 ~vke~~~~d~~~l~~l~~~~~~~~~~~~~~~~~~~~~~n~~~~~~ 339 (401)
+..+.+++ ...+..|++++.+. +..+...++ .++.||+...+
T Consensus 290 ~~~~~~~~-~~~v~~Lv~lL~~~-~~~v~~~a~-~~L~~l~~~~~ 331 (530)
T 1wa5_B 290 EAIQAVID-VRIPKRLVELLSHE-STLVQTPAL-RAVGNIVTGND 331 (530)
T ss_dssp HHHHHHHH-TTCHHHHHHGGGCS-CHHHHHHHH-HHHHHHTTSCH
T ss_pred HHHHHHHh-cCcHHHHHHHHCCC-ChhhHHHHH-HHHHHHHcCCH
Confidence 55665543 46788899999876 667888888 89999986554
No 266
>1wa5_B Importin alpha subunit; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1un0_A 2c1t_A 1bk5_A 1ee5_A 1bk6_A 1ee4_A
Probab=93.51 E-value=0.067 Score=54.23 Aligned_cols=174 Identities=13% Similarity=0.150 Sum_probs=107.5
Q ss_pred CChhHHHHHHHHHHHhhhc--chhhHHHhhhhHHHHHHHHhhccC-chhHHhhH-----------HHHHHHH-HHhcHHH
Q psy4703 154 APMDKRVTAVNNLVVLARE--MSGAEMLLKSGVAKQINTLLKCET-NEEIYLGE-----------EDFITSI-IKQGVDI 218 (401)
Q Consensus 154 ~~~~~~~~a~~~L~~l~~~--~~gae~~~~e~~v~~L~~ll~~~~-~~e~~lA~-----------e~fi~~i-~~~gv~~ 218 (401)
.+.+.+..++..+..+... ......+...+++..+..++. +. ++++...- ......+ ..++++.
T Consensus 99 ~~~~~~~~A~~~L~~ll~~~~~~~~~~~~~~g~i~~Lv~~L~-~~~~~~v~~~A~~~L~~l~~~~~~~~~~~~~~g~i~~ 177 (530)
T 1wa5_B 99 DDMQEQLSATVKFRQILSREHRPPIDVVIQAGVVPRLVEFMR-ENQPEMLQLEAAWALTNIASGTSAQTKVVVDADAVPL 177 (530)
T ss_dssp SSHHHHHHHHHHHHHHTCCSSSCSHHHHHHTTCHHHHHHTTS-TTSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTCHHH
T ss_pred CCHHHHHHHHHHHHHHhCCCCCccHHHHHHCCCHHHHHHHhC-CCCCHHHHHHHHHHHHHHhCCCHHHHHHHHHCCCHHH
Confidence 3455666666666544321 222344445677888888887 43 56653321 1111223 3567999
Q ss_pred HHHHHcCCChhHHHHHHHhhhhccccCCCCCCCCCCCCCchHHHHHHHHhhhcCCCCCchhHHhHHhhhhhccCCH--HH
Q psy4703 219 LKRLYMSKNENIRVRALVGLCKLGSMGGSDASIRPFADGSTRKLAEACRRFLVNPARDPDIRRWAAEGLAYLTLDA--EV 296 (401)
Q Consensus 219 Lk~l~~s~~d~i~~ralvgLckl~~~gg~d~~~~~~~~~s~~~l~~~~~~~l~~~~~~~~~~~~~~eglay~~~~~--~v 296 (401)
|-.++++.++.++..|+..|+.+...+. .....-...|..-.|.+ ++.. .+++.++.|+..|++++-.. ..
T Consensus 178 Lv~lL~~~~~~vr~~A~~aL~~l~~~~~-~~~~~~~~~~~l~~L~~----ll~~--~~~~v~~~a~~~L~~L~~~~~~~~ 250 (530)
T 1wa5_B 178 FIQLLYTGSVEVKEQAIWALGNVAGDST-DYRDYVLQCNAMEPILG----LFNS--NKPSLIRTATWTLSNLCRGKKPQP 250 (530)
T ss_dssp HHHHHHHCCHHHHHHHHHHHHHHHTTCH-HHHHHHHHTTCHHHHHH----GGGS--CCHHHHHHHHHHHHHHHCCSSSCC
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHhCCCc-cchHHHHHcCcHHHHHH----Hhcc--CCHHHHHHHHHHHHHHhCCCCCCC
Confidence 9999998899999999999988874210 00000011122323333 3322 56788999999999998653 22
Q ss_pred HHhhcCCHHHHHHHHHHHhcCCCCcchhhhhhhHHhhcccCCc
Q psy4703 297 KEALIEDKPALAALVDVASSVKYKNVWNGTQSDALKDVDKAFD 339 (401)
Q Consensus 297 ke~~~~d~~~l~~l~~~~~~~~~~~~~~~~~~~~~~n~~~~~~ 339 (401)
.... ....+..|+.++.+. +..+...++ .+|.||+...+
T Consensus 251 ~~~~--~~~~l~~L~~lL~~~-d~~v~~~a~-~~L~~L~~~~~ 289 (530)
T 1wa5_B 251 DWSV--VSQALPTLAKLIYSM-DTETLVDAC-WAISYLSDGPQ 289 (530)
T ss_dssp CHHH--HGGGHHHHHHHTTCC-CHHHHHHHH-HHHHHHHSSCH
T ss_pred cHHH--HHhHHHHHHHHHcCC-CHHHHHHHH-HHHHHHhCCCH
Confidence 2222 356788899998877 777888888 89999996655
No 267
>3tt9_A Plakophilin-2; cell adhesion; 1.55A {Homo sapiens}
Probab=93.28 E-value=4.6 Score=36.59 Aligned_cols=165 Identities=16% Similarity=0.076 Sum_probs=104.3
Q ss_pred hHHHHHHHHHHHhhhcch-hhHHHhhhhHHHHHHHHhhccCchhHHhhH-----------HHHHHHHH-HhcHHHHHHHH
Q psy4703 157 DKRVTAVNNLVVLAREMS-GAEMLLKSGVAKQINTLLKCETNEEIYLGE-----------EDFITSII-KQGVDILKRLY 223 (401)
Q Consensus 157 ~~~~~a~~~L~~l~~~~~-gae~~~~e~~v~~L~~ll~~~~~~e~~lA~-----------e~fi~~i~-~~gv~~Lk~l~ 223 (401)
+.+..++..+..+...+. .-..+...|++..|.++++ +.++++...- ++.-..|. .+|++.|-+++
T Consensus 25 ~~q~~Aa~~l~~L~~~~~~~r~~I~~~G~Ip~LV~lL~-s~~~~vq~~Aa~aL~nLa~~~~~nk~~I~~~GaI~~Lv~lL 103 (233)
T 3tt9_A 25 SRISAAATFIQHECFQKSEARKRVNQLRGILKLLQLLK-VQNEDVQRAVCGALRNLVFEDNDNKLEVAELNGVPRLLQVL 103 (233)
T ss_dssp HHHHHHHHHHHHHHHHCHHHHHHHHHTTHHHHHHHGGG-CCCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCcHHHHHHHHcCCHHHHHHHHc-CCCHHHHHHHHHHHHHHHhCCHHHHHHHHHcCCHHHHHHHH
Confidence 444555556555554333 3355667788999999998 6666664321 11113443 45699999999
Q ss_pred c-CCChhHHHHHHHhhhhccccCCCCCCCCCCCCCchHHHHHHHHhhhcC------------------CCCCchhHHhHH
Q psy4703 224 M-SKNENIRVRALVGLCKLGSMGGSDASIRPFADGSTRKLAEACRRFLVN------------------PARDPDIRRWAA 284 (401)
Q Consensus 224 ~-s~~d~i~~ralvgLckl~~~gg~d~~~~~~~~~s~~~l~~~~~~~l~~------------------~~~~~~~~~~~~ 284 (401)
+ +++.+++..|...|.-|... +.. .. .+.+.+=.-|+. ...+++.+..|+
T Consensus 104 ~~~~~~~~~e~a~~aL~nLS~~---~~~-------k~-~i~~~~i~~Lv~ll~~p~sG~~~~~~~~~~~~~~~~v~~na~ 172 (233)
T 3tt9_A 104 KQTRDLETKKQITGLLWNLSSN---DKL-------KN-LMITEALLTLTENIIIPFSGWPEGDYPKANGLLDFDIFYNVT 172 (233)
T ss_dssp HHCCCHHHHHHHHHHHHHHHTS---GGG-------HH-HHHHHHHHHHCCCCCHHHHCCCGGGCCCCCTTCCHHHHHHHH
T ss_pred ccCCCHHHHHHHHHHHHHHHcC---hhh-------HH-HHHhccHHHHHHHHhccccCCcccccccccccchHHHHHHHH
Confidence 7 67888877766666666431 111 11 223333222222 123668899999
Q ss_pred hhhhhccC-CHHHHHhhcCCHHHHHHHHHHHhcC------CCCcchhhhhhhHHhhcc
Q psy4703 285 EGLAYLTL-DAEVKEALIEDKPALAALVDVASSV------KYKNVWNGTQSDALKDVD 335 (401)
Q Consensus 285 eglay~~~-~~~vke~~~~d~~~l~~l~~~~~~~------~~~~~~~~~~~~~~~n~~ 335 (401)
--|..+|. +++.|..+.+-+-.+..|+.++++. .++++-.. + .++.||+
T Consensus 173 ~~L~nLss~~~~~R~~~r~~~Gli~~Lv~~l~~~~~~~~~~~k~~En~-v-~~L~nLs 228 (233)
T 3tt9_A 173 GCLRNMSSAGADGRKAMRRCDGLIDSLVHYVRGTIADYQPDDKATENC-V-CILHNLS 228 (233)
T ss_dssp HHHHHHTTSCHHHHHHHHTSTTHHHHHHHHHHHHHHTTCTTCHHHHHH-H-HHHHHHC
T ss_pred HHHHHHhcCCHHHHHHHHHCCCcHHHHHHHHHhhhhcccchhHHHHHH-H-HHHHHHH
Confidence 99999986 8999999988777788888887653 12344444 4 5899998
No 268
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=93.27 E-value=0.57 Score=39.92 Aligned_cols=114 Identities=13% Similarity=0.111 Sum_probs=80.4
Q ss_pred hHHHHHHHHHHHHHcCCH------HHHHHHHHHHHHhCCC--------CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhC
Q psy4703 46 RATCLKNRAAVYLKQNQN------DKVIEDCSKSLEIVPD--------DPKALFRRCQAYEAIGKFEEAYTDAKHIHRVE 111 (401)
Q Consensus 46 ~~~~~~n~a~~y~klg~y------~~Ai~~~~kAL~ldP~--------~~kA~~~~a~a~~~lg~~eeA~~~~~kal~l~ 111 (401)
+++.|.+......+.|+. ++-++.|++|+..-|. ++..|.+.|. +..+++.++|.+.|+.++.++
T Consensus 12 ~yd~W~~yl~llE~~g~p~~d~~l~rlrd~YerAia~~Pp~k~~~wrrYI~LWIrYA~-~~ei~D~d~aR~vy~~a~~~h 90 (161)
T 4h7y_A 12 NPEDWLSLLLKLEKNSVPLSDALLNKLIGRYSQAIEALPPDKYGQNESFARIQVRFAE-LKAIQEPDDARDYFQMARANC 90 (161)
T ss_dssp SHHHHHHHHHHHHHHTCSCCHHHHHHHHHHHHHHHHHSCGGGGTTCHHHHHHHHHHHH-HHHHHCGGGCHHHHHHHHHHC
T ss_pred CHHHHHHHHHHHHHcCCCchhhHHHHHHHHHHHHHHcCCccccccHHHHHHHHHHHHH-HHHhcCHHHHHHHHHHHHHHh
Confidence 788888888888878888 8899999999988764 3556677774 477799999999999999985
Q ss_pred CCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CCCChhHHHHHHHHHHH
Q psy4703 112 PTNKAIQPVLSRLFAIVTKRMQENEQLQNKVHNMFKYVFD-TSAPMDKRVTAVNNLVV 168 (401)
Q Consensus 112 P~~~~~~~~L~~l~~~~~~~~~a~~~~~~~~~~~~~~~~~-~~~~~~~~~~a~~~L~~ 168 (401)
..-.-++...++.....+.. .++...+.++.. .+...+....+.++|-.
T Consensus 91 KkFAKiwi~~AqFEiRqgnl--------~kARkILg~AiG~~~k~~~~le~a~~nl~~ 140 (161)
T 4h7y_A 91 KKFAFVHISFAQFELSQGNV--------KKSKQLLQKAVERGAVPLEMLEIALRNLNL 140 (161)
T ss_dssp TTBHHHHHHHHHHHHHTTCH--------HHHHHHHHHHHHTTCBCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHcccH--------HHHHHHHHHHhccCCCcHHHHHHHHHhhhc
Confidence 55444444444444443333 344556777776 55556666667666644
No 269
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=93.17 E-value=0.87 Score=50.99 Aligned_cols=115 Identities=12% Similarity=0.021 Sum_probs=82.7
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhhcC-------------------CCCcchHHHHHHHHHHHHHcCCHHHHHHHHH
Q psy4703 11 KLKESGNSAFKQGDYETALDFYTKALKVTA-------------------EESHERATCLKNRAAVYLKQNQNDKVIEDCS 71 (401)
Q Consensus 11 ~l~~~Gn~~~~~g~y~eAi~~y~~Al~l~~-------------------p~~~~~~~~~~n~a~~y~klg~y~~Ai~~~~ 71 (401)
.-+-+|..++..|++++|..+|.+|-.-.. +.....+.+|......+.+.+-++.+++...
T Consensus 844 ~~yl~g~~~L~~ge~~~A~~~F~kaa~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~YY~hv~~LFe~~~~~~~vi~fa~ 923 (1139)
T 4fhn_B 844 AVYLKALIYLKSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKYHHQNLLSCYYLHLSKKLFEESAYIDALEFSL 923 (1139)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHTCCCSCTTCCCSCSSHHHHHHHHHTTTSCCSSHHHHHHHHHHHHHTSCCHHHHHHHH
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHhhhhcccchhhhhhcccccccccccccccHHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 447899999999999999999988732110 0112244567778888889999999999999
Q ss_pred HHHHhCC-CCHH----HHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCccHHHHHHHHHHHHH
Q psy4703 72 KSLEIVP-DDPK----ALFRRCQAYEAIGKFEEAYTDAKHIHRVEPTNKAIQPVLSRLFAIVT 129 (401)
Q Consensus 72 kAL~ldP-~~~k----A~~~~a~a~~~lg~~eeA~~~~~kal~l~P~~~~~~~~L~~l~~~~~ 129 (401)
.||+..+ ++.. .|.++=..+..+|+|++|+..+-. .|+...-...|+++-..+-
T Consensus 924 lAi~~~~~~~~~~~~~l~~~iFk~~L~l~~ye~Ay~aL~~----~pd~~~r~~cLr~LV~~lc 982 (1139)
T 4fhn_B 924 LADASKETDDEDLSIAITHETLKTACAAGKFDAAHVALMV----LSTTPLKKSCLLDFVNQLT 982 (1139)
T ss_dssp HHHHHCCSCCHHHHHHHHHHHHHHHHHHCCSGGGGHHHHH----HHHSSSCHHHHHHHHHHHH
T ss_pred HHHHhccCCChhhHHHHHHHHHHHHHhhCCHHHHHHHHHh----CCCHHHHHHHHHHHHHHHH
Confidence 9999765 3332 577788899999999999887643 2443334555555544443
No 270
>2z6h_A Catenin beta-1, beta-catenin; C-terminal domain, activator, alternative splicing, cell adhesion, cytoplasm, cytoskeleton, disease mutation, nucleus; 2.20A {Homo sapiens}
Probab=93.15 E-value=0.45 Score=49.53 Aligned_cols=175 Identities=14% Similarity=0.143 Sum_probs=111.0
Q ss_pred CChhHHHHHHHHHHHhhhcchhhHHHhhh-hHHHHHHHHhhccCchhHHhhH----------HHHHHHHH-HhcHHHHHH
Q psy4703 154 APMDKRVTAVNNLVVLAREMSGAEMLLKS-GVAKQINTLLKCETNEEIYLGE----------EDFITSII-KQGVDILKR 221 (401)
Q Consensus 154 ~~~~~~~~a~~~L~~l~~~~~gae~~~~e-~~v~~L~~ll~~~~~~e~~lA~----------e~fi~~i~-~~gv~~Lk~ 221 (401)
.+...+..+...|..+.........++.. +++..+..++..+.++++...- .+....+. ..+++.|-.
T Consensus 26 ~~~~vr~~A~~~L~~La~~~~~~~~i~~~~~~i~~Lv~~L~~~~~~~~~~~A~~~L~~Ls~~~~~~~~i~~~g~i~~Lv~ 105 (644)
T 2z6h_A 26 EDQVVVNKAAVMVHQLSKKEASRHAIMRSPQMVSAIVRTMQNTNDVETARCTAGTLHNLSHHREGLLAIFKSGGIPALVK 105 (644)
T ss_dssp SCHHHHHHHHHHHHHHHTSTTHHHHHTTCHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHTTSHHHHHHHHTTTHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHCCChhHHHHHhccChHHHHHHHHhcCCCHHHHHHHHHHHHHHhcChhhHHHHHHcCCHHHHHH
Confidence 45566777777777776655443444433 6677777777622355553321 11223333 356899999
Q ss_pred HHcCCChhHHHHHHHhhhhccccCCCCCCCCCC-CCCchHHHHHHHHhhhcCCCCCchhHHhHHhhhhhccC-CHHHHHh
Q psy4703 222 LYMSKNENIRVRALVGLCKLGSMGGSDASIRPF-ADGSTRKLAEACRRFLVNPARDPDIRRWAAEGLAYLTL-DAEVKEA 299 (401)
Q Consensus 222 l~~s~~d~i~~ralvgLckl~~~gg~d~~~~~~-~~~s~~~l~~~~~~~l~~~~~~~~~~~~~~eglay~~~-~~~vke~ 299 (401)
++++.++.++..|+..|+.+.... +...+.+ ..|- ....-++|..+ ++..+..+++.|.-++. .++.|+.
T Consensus 106 lL~~~~~~v~~~A~~aL~nL~~~~--~~~~~~v~~~g~----i~~Lv~lL~~~--~~~~~~~a~~~L~~La~~~~~~~~~ 177 (644)
T 2z6h_A 106 MLGSPVDSVLFYAITTLHNLLLHQ--EGAKMAVRLAGG----LQKMVALLNKT--NVKFLAITTDCLQILAYGNQESKLI 177 (644)
T ss_dssp HTTCSSHHHHHHHHHHHHHHHHHS--TTHHHHHHHTTH----HHHHHHGGGCC--CHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHhCCCHHHHHHHHHHHHHHHhCc--chhHHHHHHCCC----hHHHHHHHCcC--CHHHHHHHHHHHHHHHhcCcHHHHH
Confidence 999989999888888888887532 1111111 1232 23333444433 45677778888888886 7899988
Q ss_pred hcCCHHHHHHHHHHHhcCCCCcchhhhhhhHHhhcccCC
Q psy4703 300 LIEDKPALAALVDVASSVKYKNVWNGTQSDALKDVDKAF 338 (401)
Q Consensus 300 ~~~d~~~l~~l~~~~~~~~~~~~~~~~~~~~~~n~~~~~ 338 (401)
+++. ..+..|++++++.....+.+.++ .++.||+..-
T Consensus 178 i~~~-g~v~~Lv~lL~~~~~~~~~~~a~-~~L~nLs~~~ 214 (644)
T 2z6h_A 178 ILAS-GGPQALVNIMRTYTYEKLLWTTS-RVLKVLSVCS 214 (644)
T ss_dssp HHHT-THHHHHHHHHTTCCCHHHHHHHH-HHHHHHTTCT
T ss_pred HHHc-CChHHHHHHHHcCChHHHHHHHH-HHHHHHhcCc
Confidence 8765 67999999998773344667777 8888888543
No 271
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=93.05 E-value=1.4 Score=43.01 Aligned_cols=98 Identities=8% Similarity=-0.008 Sum_probs=75.4
Q ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCC----------C------------HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhC
Q psy4703 54 AAVYLKQNQNDKVIEDCSKSLEIVPD----------D------------PKALFRRCQAYEAIGKFEEAYTDAKHIHRVE 111 (401)
Q Consensus 54 a~~y~klg~y~~Ai~~~~kAL~ldP~----------~------------~kA~~~~a~a~~~lg~~eeA~~~~~kal~l~ 111 (401)
|......|+.+.|+..+.+|+.+... + ..+...++.++..+|++++|+..+.+++..+
T Consensus 122 ~~~~~~~~~~~~a~~~l~~Al~L~rG~~L~~~~~~~w~~~~r~~l~~~~~~a~~~~~~~~l~~g~~~~a~~~l~~~~~~~ 201 (388)
T 2ff4_A 122 GVHAAAAGRFEQASRHLSAALREWRGPVLDDLRDFQFVEPFATALVEDKVLAHTAKAEAEIACGRASAVIAELEALTFEH 201 (388)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHTTCCSSTTGGGTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS
T ss_pred HHHHHhCCCHHHHHHHHHHHHHhcCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhC
Confidence 33344568999999999999988521 1 1345567888899999999999999999999
Q ss_pred CCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q psy4703 112 PTNKAIQPVLSRLFAIVTKRMQENEQLQNKVHNMFKYVFD 151 (401)
Q Consensus 112 P~~~~~~~~L~~l~~~~~~~~~a~~~~~~~~~~~~~~~~~ 151 (401)
|-+..++..+.+++...++...+...+......+.+.+..
T Consensus 202 P~~E~~~~~lm~al~~~Gr~~~Al~~y~~~r~~L~~eLG~ 241 (388)
T 2ff4_A 202 PYREPLWTQLITAYYLSDRQSDALGAYRRVKTTLADDLGI 241 (388)
T ss_dssp TTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHSC
T ss_pred CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhCC
Confidence 9999999999999999998888877664444433334433
No 272
>3nmw_A APC variant protein; ARMADIILO repeats domain, cell adhesion-cell cycle complex; 1.60A {Homo sapiens} PDB: 3nmx_A 3t7u_A 3au3_A 3qhe_A
Probab=93.04 E-value=0.29 Score=47.52 Aligned_cols=117 Identities=19% Similarity=0.152 Sum_probs=81.2
Q ss_pred Hhc-HHHHHHHHcCCChhHHHHHHHhhhhccccCCCCCCCCCC-CCCchHHHHHHHHhhhcCCCCCchhHHhHHhhhhhc
Q psy4703 213 KQG-VDILKRLYMSKNENIRVRALVGLCKLGSMGGSDASIRPF-ADGSTRKLAEACRRFLVNPARDPDIRRWAAEGLAYL 290 (401)
Q Consensus 213 ~~g-v~~Lk~l~~s~~d~i~~ralvgLckl~~~gg~d~~~~~~-~~~s~~~l~~~~~~~l~~~~~~~~~~~~~~eglay~ 290 (401)
..| ++.|-+++++++++++..|...|..|.. +.++.+.... ..|..-.|.+... ...+++.++.|+--|.-+
T Consensus 125 ~~GaIp~LV~LL~s~~~~v~~~A~~aL~nLs~-~~~~~~k~~i~~~G~Ip~Lv~lL~-----~~~~~~~~~~A~~aL~nL 198 (354)
T 3nmw_A 125 MKGCMRALVAQLKSESEDLQQVIASVLRNLSW-RADVNSKKTLREVGSVKALMECAL-----EVKKESTLKSVLSALWNL 198 (354)
T ss_dssp CHHHHHHHHHGGGCSCHHHHHHHHHHHHHHHT-TCCHHHHHHHHHTTHHHHHHHHHH-----HCCCHHHHHHHHHHHHHH
T ss_pred cCCcHHHHHHHHCCCCHHHHHHHHHHHHHHhc-cCCHHHHHHHHHCCCHHHHHHHHh-----cCCCHHHHHHHHHHHHHH
Confidence 466 9999999999999999888888877743 1112211111 1233333333321 223567888899999988
Q ss_pred cC-CHHHHHhhcCCHHHHHHHHHHHhcCCCC---cchhhhhhhHHhhccc
Q psy4703 291 TL-DAEVKEALIEDKPALAALVDVASSVKYK---NVWNGTQSDALKDVDK 336 (401)
Q Consensus 291 ~~-~~~vke~~~~d~~~l~~l~~~~~~~~~~---~~~~~~~~~~~~n~~~ 336 (401)
|. .++.|..++.+...|..|++++++..+. .+.--++ .++.||+.
T Consensus 199 s~~~~~nk~~i~~~~Gai~~Lv~lL~~~~~~~~~~v~~~A~-~aL~nLs~ 247 (354)
T 3nmw_A 199 SAHCTENKADICAVDGALAFLVGTLTYRSQTNTLAIIESGG-GILRNVSS 247 (354)
T ss_dssp HTTCHHHHHHHHHSTTHHHHHHHHTTCCCSSSCCHHHHHHH-HHHHHHHH
T ss_pred HccChhhhHHHHHhcCcHHHHHHHhccCCCcccHHHHHHHH-HHHHHHHh
Confidence 87 8899999998888999999999876332 2556566 78899986
No 273
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=92.84 E-value=0.52 Score=47.97 Aligned_cols=80 Identities=15% Similarity=0.076 Sum_probs=72.5
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhhcCCCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q psy4703 11 KLKESGNSAFKQGDYETALDFYTKALKVTAEESHERATCLKNRAAVYLKQNQNDKVIEDCSKSLEIVPDDPKALFRRCQA 90 (401)
Q Consensus 11 ~l~~~Gn~~~~~g~y~eAi~~y~~Al~l~~p~~~~~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~ldP~~~kA~~~~a~a 90 (401)
-+...|....-+..+..|..+|.+|+.+. |+ ....|..+|..+...|++-+|+-+|.+++.....++.|.-++...
T Consensus 154 ~l~~LGDL~RY~~~~~~A~~~Y~~A~~~~-P~---~G~~~nqLavla~~~~~~l~a~y~y~rsl~~~~Pf~~a~~nL~~~ 229 (497)
T 1ya0_A 154 CLVHLGDIARYRNQTSQAESYYRHAAQLV-PS---NGQPYNQLAILASSKGDHLTTIFYYCRSIAVKFPFPAASTNLQKA 229 (497)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TT---BSHHHHHHHHHHHHTTCHHHHHHHHHHHHSSSBCCHHHHHHHHHH
T ss_pred HHHHcccHHHHHHHHHHHHHHHHHHHHhC-CC---CCchHHHHHHHHhcccccHHHHHHHHHHHhcCCCChhHHHHHHHH
Confidence 45678888888999999999999999999 77 889999999999999999999999999999988899999999887
Q ss_pred HHHc
Q psy4703 91 YEAI 94 (401)
Q Consensus 91 ~~~l 94 (401)
+.+.
T Consensus 230 f~~~ 233 (497)
T 1ya0_A 230 LSKA 233 (497)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7653
No 274
>3now_A UNC-45 protein, SD10334P; armadillo repeat, HSP90, myosin, tetra-tricopeptide repeat, binding protein required for myosin function; 2.99A {Drosophila melanogaster}
Probab=92.52 E-value=0.45 Score=51.34 Aligned_cols=184 Identities=13% Similarity=0.063 Sum_probs=114.9
Q ss_pred HHHHhhcCCCChhHHHHHHHHHHHhhhcchhhHHHhhhhHHHHHHHHhhccCchhHH-hh---HHHHH---------HH-
Q psy4703 145 MFKYVFDTSAPMDKRVTAVNNLVVLAREMSGAEMLLKSGVAKQINTLLKCETNEEIY-LG---EEDFI---------TS- 210 (401)
Q Consensus 145 ~~~~~~~~~~~~~~~~~a~~~L~~l~~~~~gae~~~~e~~v~~L~~ll~~~~~~e~~-lA---~e~fi---------~~- 210 (401)
.+-.++. .++...+..++..|.-+.........+...|++..|..++. +.++... .| ..... ..
T Consensus 499 ~LV~LL~-s~s~~vqe~Aa~aL~NLA~d~~~r~~Vv~~Gaip~Lv~LL~-s~~~~~k~~Aa~AL~nL~~~~~p~~~~~~~ 576 (810)
T 3now_A 499 ALCALAK-TESHNSQELIARVLNAVCGLKELRGKVVQEGGVKALLRMAL-EGTEKGKRHATQALARIGITINPEVSFSGQ 576 (810)
T ss_dssp HHHHHHT-CCCHHHHHHHHHHHHHHHTSHHHHHHHHHTTHHHHHHHHHH-SSCHHHHHHHHHHHHHHHHHSCHHHHTTTH
T ss_pred HHHHHHc-CCCHHHHHHHHHHHHHHcCCHHHHHHHHHCCCHHHHHHHHc-cCCHHHHHHHHHHHHHHhcCCChhhhhcch
Confidence 3333333 45566777777777666655555566777888999999998 5554432 22 11111 00
Q ss_pred HHHhcHHHHHHHHcCCCh-hHHHHHHHhhhhccccCCCCCCCCCCCCCchHHHHHHHHhhhcCCCCCchhHHhHHhhhhh
Q psy4703 211 IIKQGVDILKRLYMSKNE-NIRVRALVGLCKLGSMGGSDASIRPFADGSTRKLAEACRRFLVNPARDPDIRRWAAEGLAY 289 (401)
Q Consensus 211 i~~~gv~~Lk~l~~s~~d-~i~~ralvgLckl~~~gg~d~~~~~~~~~s~~~l~~~~~~~l~~~~~~~~~~~~~~eglay 289 (401)
....+++.|-.+++++++ ....-|+.+|+.|.+. +++.......+|-. ..+-.+|.. .++..++.|++-|+.
T Consensus 577 ~~~~aIppLv~LL~~~~~~l~~~eAl~AL~NLa~~-~d~~~~~Ii~aG~l----~~Lv~LL~s--~~~~Vq~~A~~~L~N 649 (810)
T 3now_A 577 RSLDVIRPLLNLLQQDCTALENFESLMALTNLASM-NESVRQRIIKEQGV----SKIEYYLME--DHLYLTRAAAQCLCN 649 (810)
T ss_dssp HHHHTHHHHHHTTSTTSCHHHHHHHHHHHHHHTTS-CHHHHHHHHHTTHH----HHHHHHHHS--CCTTHHHHHHHHHHH
T ss_pred hhhcHHHHHHHHhCCCCcHHHHHHHHHHHHHHhcC-CHHHHHHHHHcCCH----HHHHHHHcC--CCHHHHHHHHHHHHH
Confidence 123478888888875544 3334566677766643 11110001111222 222333432 345789999999999
Q ss_pred ccCCHHHHHhhcCCHHHHHHHHHHHhcCCCCcchhhhhhhHHhhcccCCc
Q psy4703 290 LTLDAEVKEALIEDKPALAALVDVASSVKYKNVWNGTQSDALKDVDKAFD 339 (401)
Q Consensus 290 ~~~~~~vke~~~~d~~~l~~l~~~~~~~~~~~~~~~~~~~~~~n~~~~~~ 339 (401)
++..++....++++...|+.|+.++.+. +..+.=-++ .+|.|||...|
T Consensus 650 La~~~~~~~~~v~~~g~l~~Lv~LL~s~-d~~vq~~Aa-~ALanLt~~s~ 697 (810)
T 3now_A 650 LVMSEDVIKMFEGNNDRVKFLALLCEDE-DEETATACA-GALAIITSVSV 697 (810)
T ss_dssp HTTSHHHHHHHHSSSSHHHHHHHGGGCS-SHHHHHHHH-HHHHHHHHHCH
T ss_pred HhCChHHHHHHHhccCcHHHHHHHhcCC-CHHHHHHHH-HHHHHHhCCCH
Confidence 9999999999997678999999999887 666666666 88888886444
No 275
>3tpo_A Importin subunit alpha-2; nuclear import, protein transport; 2.10A {Mus musculus} PDB: 1qgk_B 1qgr_B
Probab=91.97 E-value=2.8 Score=42.33 Aligned_cols=181 Identities=15% Similarity=0.143 Sum_probs=106.5
Q ss_pred hhcCCCChhHHHHHHHHHHHhhhcchh-hHHHhhhhHHHHHHHHhhccCchhHHhh----HH-------HHHHHH-HHhc
Q psy4703 149 VFDTSAPMDKRVTAVNNLVVLAREMSG-AEMLLKSGVAKQINTLLKCETNEEIYLG----EE-------DFITSI-IKQG 215 (401)
Q Consensus 149 ~~~~~~~~~~~~~a~~~L~~l~~~~~g-ae~~~~e~~v~~L~~ll~~~~~~e~~lA----~e-------~fi~~i-~~~g 215 (401)
++....+.+.+..++..|.-+...... ...+...|++..+..++. +.++++... .. .+-..+ ..++
T Consensus 127 lL~~~~~~~~q~~Aa~aL~nia~~~~~~~~~vv~~Gaip~Lv~LL~-s~~~~v~e~A~~aL~nLa~~~~~~r~~i~~~g~ 205 (529)
T 3tpo_A 127 FLGKTDCSPIQFESAWALTNIASGTSEQTKAVVDGGAIPAFISLLA-SPHAHISEQAVWALGNIAGAGSAFRDLVIKHGA 205 (529)
T ss_dssp HHTCTTCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHTT-CSCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTC
T ss_pred HHcCCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHCCCHHHHHHHHc-CCCHHHHHHHHHHHHHHhccCHHHHHHHHHcCC
Confidence 333344455666666666655543333 345556778999999888 666666321 11 111233 3456
Q ss_pred HHHHHHHHcCCChh-----HHHHHHHhhhhccccCCCCCCCCCCCCCchHHHHHHHHhhhcCCCCCchhHHhHHhhhhhc
Q psy4703 216 VDILKRLYMSKNEN-----IRVRALVGLCKLGSMGGSDASIRPFADGSTRKLAEACRRFLVNPARDPDIRRWAAEGLAYL 290 (401)
Q Consensus 216 v~~Lk~l~~s~~d~-----i~~ralvgLckl~~~gg~d~~~~~~~~~s~~~l~~~~~~~l~~~~~~~~~~~~~~eglay~ 290 (401)
++.|-.++.+.+.. +...+...|+.+... .... . . -.....+....-++| ...+++.+.+|+-.|+|+
T Consensus 206 i~~Ll~lL~~~~~~~~~~~~~~~a~~~L~nl~~~-~~~~-~-~--~~~~~~~lp~L~~LL--~~~~~~v~~~a~~aL~~l 278 (529)
T 3tpo_A 206 IDPLLALLAVPDLSTLACGYLRNLTWTLSNLCRN-KNPA-P-P--LDAVEQILPTLVRLL--HHNDPEVLADSCWAISYL 278 (529)
T ss_dssp HHHHHHTTCSSCGGGSCHHHHHHHHHHHHHHHCC-CTTC-C-C--HHHHHHHHHHHHHHT--TSSCHHHHHHHHHHHHHH
T ss_pred cHHHHHHHhccchhHhHHHHHHHHHHHHHHHHhc-ccch-h-h--HHHHhhHHHHHHHHh--cCCcHHHHHHHHHHHHHh
Confidence 88888888754322 111233344433321 1111 0 0 011112223333333 245778999999999999
Q ss_pred cCCHHHHHhhcCCHHHHHHHHHHHhcCCCCcchhhhhhhHHhhcccCCc
Q psy4703 291 TLDAEVKEALIEDKPALAALVDVASSVKYKNVWNGTQSDALKDVDKAFD 339 (401)
Q Consensus 291 ~~~~~vke~~~~d~~~l~~l~~~~~~~~~~~~~~~~~~~~~~n~~~~~~ 339 (401)
+-.++-+-+++.+...+..|++++.+. +..+...++ .++.||...-+
T Consensus 279 ~~~~~~~~~~v~~~g~i~~Lv~lL~~~-~~~v~~~a~-~aL~nl~~~~~ 325 (529)
T 3tpo_A 279 TDGPNERIEMVVKKGVVPQLVKLLGAT-ELPIVTPAL-RAIGNIVTGTD 325 (529)
T ss_dssp HSSCHHHHHHHHTTTCHHHHHHHHTCS-CHHHHHHHH-HHHHHHTTSCH
T ss_pred hhhhhhhHHHHHhccchHHHHHHhcCC-ChhHHHHHH-HHHHHHHccch
Confidence 987776666666778899999999887 667777778 88888875444
No 276
>3tpo_A Importin subunit alpha-2; nuclear import, protein transport; 2.10A {Mus musculus} PDB: 1qgk_B 1qgr_B
Probab=91.90 E-value=0.45 Score=48.30 Aligned_cols=175 Identities=18% Similarity=0.170 Sum_probs=111.9
Q ss_pred CCChhHHHHHHHHHHHhhhcchh-hHHHhhhhHHHHHHHHhhccCchhHHhhH-----------HHHHHHH-HHhcHHHH
Q psy4703 153 SAPMDKRVTAVNNLVVLAREMSG-AEMLLKSGVAKQINTLLKCETNEEIYLGE-----------EDFITSI-IKQGVDIL 219 (401)
Q Consensus 153 ~~~~~~~~~a~~~L~~l~~~~~g-ae~~~~e~~v~~L~~ll~~~~~~e~~lA~-----------e~fi~~i-~~~gv~~L 219 (401)
..+.+.+..+...|..+...... ...+...+++..+..++. +.++.+...- +.....+ ..++++.|
T Consensus 262 ~~~~~v~~~a~~aL~~l~~~~~~~~~~v~~~g~i~~Lv~lL~-~~~~~v~~~a~~aL~nl~~~~~~~~~~i~~~g~l~~L 340 (529)
T 3tpo_A 262 HNDPEVLADSCWAISYLTDGPNERIEMVVKKGVVPQLVKLLG-ATELPIVTPALRAIGNIVTGTDEQTQKVIDAGALAVF 340 (529)
T ss_dssp SSCHHHHHHHHHHHHHHHSSCHHHHHHHHTTTCHHHHHHHHT-CSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTGGGGH
T ss_pred CCcHHHHHHHHHHHHHhhhhhhhhHHHHHhccchHHHHHHhc-CCChhHHHHHHHHHHHHHccchHHHHHHhhcccHHHH
Confidence 34455566666666655554333 344445677888888888 5566553321 1222333 44668999
Q ss_pred HHHHcCCChhHHHHHHHhhhhccccCCCCCCCCCC-CCCchHHHHHHHHhhhcCCCCCchhHHhHHhhhhhccC--CHHH
Q psy4703 220 KRLYMSKNENIRVRALVGLCKLGSMGGSDASIRPF-ADGSTRKLAEACRRFLVNPARDPDIRRWAAEGLAYLTL--DAEV 296 (401)
Q Consensus 220 k~l~~s~~d~i~~ralvgLckl~~~gg~d~~~~~~-~~~s~~~l~~~~~~~l~~~~~~~~~~~~~~eglay~~~--~~~v 296 (401)
..++++.++.++..|...|+.+.... .+. .... ..| +....-.+|. +.+.+.++.|+--|.-++. +++-
T Consensus 341 ~~LL~~~~~~i~~~a~~aL~nl~~~~-~~~-~~~v~~~g----~i~~Lv~lL~--~~~~~v~~~A~~aL~nl~~~~~~~~ 412 (529)
T 3tpo_A 341 PSLLTNPKTNIQKEATWTMSNITAGR-QDQ-IQQVVNHG----LVPFLVGVLS--KADFKTQKAAAWAITNYTSGGTVEQ 412 (529)
T ss_dssp HHHTTCSSHHHHHHHHHHHHHHHTSC-HHH-HHHHHHTT----HHHHHHHHHH--SSCHHHHHHHHHHHHHHHHHSCHHH
T ss_pred HHHHcCCCHHHHHHHHHHHHHHhccc-HHH-HHHHHhcC----cHHHHHHHhc--CCCHHHHHHHHHHHHHHHcCCCHHH
Confidence 99999999999999999998887521 111 0000 011 1222222332 3466889999999998876 5666
Q ss_pred HHhhcCCHHHHHHHHHHHhcCCCCcchhhhhhhHHhhcccCCc
Q psy4703 297 KEALIEDKPALAALVDVASSVKYKNVWNGTQSDALKDVDKAFD 339 (401)
Q Consensus 297 ke~~~~d~~~l~~l~~~~~~~~~~~~~~~~~~~~~~n~~~~~~ 339 (401)
...|++ ...++.|++++.+. |..+..-++ ..|.|+.+.-+
T Consensus 413 ~~~l~~-~g~i~~L~~LL~~~-d~~i~~~~L-~aL~nil~~~~ 452 (529)
T 3tpo_A 413 IVYLVH-CGIIEPLMNLLSAK-DTKIIQVIL-DAISNIFQAAE 452 (529)
T ss_dssp HHHHHH-TTCHHHHHHGGGCS-CHHHHHHHH-HHHHHHHHHHH
T ss_pred HHHHHH-CcCHHHHHHHhcCC-CHHHHHHHH-HHHHHHHHHhH
Confidence 666653 55788999999887 888888888 88888875544
No 277
>1te4_A Conserved protein MTH187; methanobacterium thermoautotrophicum, structural proteomics, heat-like repeat; NMR {Methanothermobacterthermautotrophicus} SCOP: a.118.1.16
Probab=91.35 E-value=0.61 Score=37.75 Aligned_cols=87 Identities=16% Similarity=0.058 Sum_probs=59.1
Q ss_pred HHHHHHHHcCCChhHHHHHHHhhhhccccCCCCCCCCCCCCCchHHHHHHHHhhhcCCCCCchhHHhHHhhhhhccCCHH
Q psy4703 216 VDILKRLYMSKNENIRVRALVGLCKLGSMGGSDASIRPFADGSTRKLAEACRRFLVNPARDPDIRRWAAEGLAYLTLDAE 295 (401)
Q Consensus 216 v~~Lk~l~~s~~d~i~~ralvgLckl~~~gg~d~~~~~~~~~s~~~l~~~~~~~l~~~~~~~~~~~~~~eglay~~~~~~ 295 (401)
++.|..+++..++.+|..|+..|..++.. .. .....+.|. ..++..|.+|++.|+.+.
T Consensus 44 ~~~L~~~L~d~~~~vR~~A~~aL~~~~~~------------~a----~~~L~~~L~--d~~~~VR~~A~~aL~~~~---- 101 (131)
T 1te4_A 44 FEPLLESLSNEDWRIRGAAAWIIGNFQDE------------RA----VEPLIKLLE--DDSGFVRSGAARSLEQIG---- 101 (131)
T ss_dssp HHHHHHGGGCSCHHHHHHHHHHHGGGCSH------------HH----HHHHHHHHH--HCCTHHHHHHHHHHHHHC----
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHhcCCH------------HH----HHHHHHHHc--CCCHHHHHHHHHHHHHhC----
Confidence 56777777878888888888888887631 11 222233332 346688999999998763
Q ss_pred HHHhhcCCHHHHHHHHHHHhcCCCCcchhhhhhhHHhh
Q psy4703 296 VKEALIEDKPALAALVDVASSVKYKNVWNGTQSDALKD 333 (401)
Q Consensus 296 vke~~~~d~~~l~~l~~~~~~~~~~~~~~~~~~~~~~n 333 (401)
|+.++..|++++++. +..+...++ ..|.+
T Consensus 102 -------~~~a~~~L~~~l~d~-~~~vr~~A~-~aL~~ 130 (131)
T 1te4_A 102 -------GERVRAAMEKLAETG-TGFARKVAV-NYLET 130 (131)
T ss_dssp -------SHHHHHHHHHHTTSC-CTHHHHHHH-HHGGG
T ss_pred -------cHHHHHHHHHHHhCC-CHHHHHHHH-HHHHh
Confidence 677888888888765 666666666 55443
No 278
>1oyz_A Hypothetical protein YIBA; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.10A {Escherichia coli} SCOP: a.118.1.16
Probab=91.15 E-value=8.3 Score=34.76 Aligned_cols=27 Identities=15% Similarity=0.214 Sum_probs=15.0
Q ss_pred HHHHHHHHcCCChhHHHHHHHhhhhcc
Q psy4703 216 VDILKRLYMSKNENIRVRALVGLCKLG 242 (401)
Q Consensus 216 v~~Lk~l~~s~~d~i~~ralvgLckl~ 242 (401)
++.|..++++.++.++..|+..|+.++
T Consensus 130 ~~~L~~~l~d~~~~vR~~a~~aL~~~~ 156 (280)
T 1oyz_A 130 VEQSQITAFDKSTNVRRATAFAISVIN 156 (280)
T ss_dssp HHHHHHHTTCSCHHHHHHHHHHHHTC-
T ss_pred HHHHHHHhhCCCHHHHHHHHHHHHhcC
Confidence 455555555555666666666665554
No 279
>1xm9_A Plakophilin 1; armadillo repeat, cell adhesion; 2.80A {Homo sapiens} SCOP: a.118.1.24
Probab=91.01 E-value=0.34 Score=48.40 Aligned_cols=118 Identities=24% Similarity=0.201 Sum_probs=84.1
Q ss_pred HHHhcHHHHHHHHcCCChhHHHHHHHhhhhccccCCCCCCCCCC-CCCchHHHHHHHHhhhcCCCCCchhHHhHHhhhhh
Q psy4703 211 IIKQGVDILKRLYMSKNENIRVRALVGLCKLGSMGGSDASIRPF-ADGSTRKLAEACRRFLVNPARDPDIRRWAAEGLAY 289 (401)
Q Consensus 211 i~~~gv~~Lk~l~~s~~d~i~~ralvgLckl~~~gg~d~~~~~~-~~~s~~~l~~~~~~~l~~~~~~~~~~~~~~eglay 289 (401)
+..+|++.|-++++++++.+...|...|..+... ++.+.... ..|..-.|.+..+ .+.+++.+.+|+.-|..
T Consensus 41 ~~~g~i~~Lv~lL~s~~~~~~~~A~~aL~nLa~~--~~~~k~~i~~~G~i~~Lv~lL~-----~~~~~~~~~~a~~aL~n 113 (457)
T 1xm9_A 41 YQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFR--STTNKLETRRQNGIREAVSLLR-----RTGNAEIQKQLTGLLWN 113 (457)
T ss_dssp HHTTHHHHHHHHTTSSCHHHHHHHHHHHHHHHSS--CHHHHHHHHHTTCHHHHHHHHT-----TCCCHHHHHHHHHHHHH
T ss_pred HHcCCHHHHHHHHcCCCHHHHHHHHHHHHHHhcC--CHHHHHHHHHcCCHHHHHHHHh-----hCCCHHHHHHHHHHHHH
Confidence 3456699999999999999988888888877752 22222112 2344444555443 13467899999999999
Q ss_pred ccCCHHHHHhhcCCHHHHHHHHHHHhc--------C-------CCCcchhhhhhhHHhhcccCCc
Q psy4703 290 LTLDAEVKEALIEDKPALAALVDVASS--------V-------KYKNVWNGTQSDALKDVDKAFD 339 (401)
Q Consensus 290 ~~~~~~vke~~~~d~~~l~~l~~~~~~--------~-------~~~~~~~~~~~~~~~n~~~~~~ 339 (401)
++.+++.|+.+++ ..+..|++++.. . .+..+..-++ .+|.||+.. |
T Consensus 114 La~~~~~~~~i~~--g~i~~Lv~ll~~~~s~~~~~~~~~~~e~~~~~v~~~a~-~aL~nLs~~-~ 174 (457)
T 1xm9_A 114 LSSTDELKEELIA--DALPVLADRVIIPFSGWCDGNSNMSREVVDPEVFFNAT-GCLRNLSSA-D 174 (457)
T ss_dssp HHTSSSTHHHHHH--HHHHHHHHHTTHHHHTCC---------CCCHHHHHHHH-HHHHHHTTS-H
T ss_pred HhcCHHhHHHHHh--ccHHHHHHHHhccccccccCccchhcccccHHHHHHHH-HHHHHHccC-H
Confidence 9999999999986 899999999932 1 1223445666 889999976 6
No 280
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=90.77 E-value=2.5 Score=44.22 Aligned_cols=46 Identities=13% Similarity=-0.140 Sum_probs=28.1
Q ss_pred HHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHH
Q psy4703 57 YLKQNQNDKVIEDCSKSLEIVPDDPKALFRRCQAYEAIGKFEEAYTDAKHI 107 (401)
Q Consensus 57 y~klg~y~~Ai~~~~kAL~ldP~~~kA~~~~a~a~~~lg~~eeA~~~~~ka 107 (401)
.+.+|++++|.+.+. ..++...|.++|..+.+.++++.|..+|.++
T Consensus 662 ~l~~~~~~~A~~~~~-----~~~~~~~W~~la~~al~~~~~~~A~~~y~~~ 707 (814)
T 3mkq_A 662 ALKVGQLTLARDLLT-----DESAEMKWRALGDASLQRFNFKLAIEAFTNA 707 (814)
T ss_dssp HHHHTCHHHHHHHHT-----TCCCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred hhhcCCHHHHHHHHH-----hhCcHhHHHHHHHHHHHcCCHHHHHHHHHHc
Confidence 345666666666542 2245566666666666666666666666654
No 281
>3ul1_B Importin subunit alpha-2; arm repeat, armadillo repeat, nuclear transport, nuclear LOC signal binding, importin beta binding; 1.90A {Mus musculus} PDB: 3ukx_B 3uky_B 3ukz_B 3ukw_B 3ul0_B 3oqs_A 3rz9_A 3rzx_A 3uvu_A 1q1s_C 1q1t_C 3knd_A 1ejy_I 1iq1_C 1ejl_I 1pjn_B 1pjm_B 3q5u_A 3fey_C 3fex_C ...
Probab=90.00 E-value=0.55 Score=47.47 Aligned_cols=175 Identities=18% Similarity=0.169 Sum_probs=113.0
Q ss_pred CCChhHHHHHHHHHHHhhhcchh-hHHHhhhhHHHHHHHHhhccCchhHHhhH-----------HHHHHHH-HHhcHHHH
Q psy4703 153 SAPMDKRVTAVNNLVVLAREMSG-AEMLLKSGVAKQINTLLKCETNEEIYLGE-----------EDFITSI-IKQGVDIL 219 (401)
Q Consensus 153 ~~~~~~~~~a~~~L~~l~~~~~g-ae~~~~e~~v~~L~~ll~~~~~~e~~lA~-----------e~fi~~i-~~~gv~~L 219 (401)
..+.+.+..+...|..+...... ...+...+++..+..++. +.++.+...- +.....+ ..++++.|
T Consensus 243 ~~~~~v~~~A~~aL~~L~~~~~~~~~~i~~~g~i~~Lv~lL~-~~~~~v~~~al~aL~nl~~~~~~~~~~i~~~g~l~~L 321 (510)
T 3ul1_B 243 HNDPEVLADSCWAISYLTDGPNERIEMVVKKGVVPQLVKLLG-ATELPIVTPALRAIGNIVTGTDEQTQKVIDAGALAVF 321 (510)
T ss_dssp CSCHHHHHHHHHHHHHHTSSCHHHHHHHHTTTCHHHHHHHHT-CSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTGGGGC
T ss_pred cCCHHHHHHHHHHHHHHhhchhhhHHHHHhcccchhhhhhhc-CCChhhhhHHHHHHHHhhcCCHHHHHHHhhccchHHH
Confidence 44556666777777766654333 344445677888888888 5565553321 2222333 34568888
Q ss_pred HHHHcCCChhHHHHHHHhhhhccccCCCCCCCCCC-CCCchHHHHHHHHhhhcCCCCCchhHHhHHhhhhhccC--CHHH
Q psy4703 220 KRLYMSKNENIRVRALVGLCKLGSMGGSDASIRPF-ADGSTRKLAEACRRFLVNPARDPDIRRWAAEGLAYLTL--DAEV 296 (401)
Q Consensus 220 k~l~~s~~d~i~~ralvgLckl~~~gg~d~~~~~~-~~~s~~~l~~~~~~~l~~~~~~~~~~~~~~eglay~~~--~~~v 296 (401)
..++++.++.++..|...|+.+.... .+. .... ..| +....-.+|. ..+.+.|+.|+--|+-++. +++.
T Consensus 322 ~~LL~~~~~~v~~~A~~aL~nl~a~~-~~~-~~~v~~~g----~i~~Lv~lL~--~~~~~v~~~Aa~aL~Nl~~~~~~~~ 393 (510)
T 3ul1_B 322 PSLLTNPKTNIQKEATWTMSNITAGR-QDQ-IQQVVNHG----LVPFLVGVLS--KADFKTQKEAAWAITNYTSGGTVEQ 393 (510)
T ss_dssp C-CTTCSSHHHHHHHHHHHHHHTTSC-HHH-HHHHHHTT----HHHHHHHHHH--SSCHHHHHHHHHHHHHHHHHCCHHH
T ss_pred HHHhcCCCHHHHHHHHHHHHHHHcCc-HHH-HHHHHhcC----CHHHHHHHHc--CCCHHHHHHHHHHHHHHHccCCHHH
Confidence 89999999999999999999887521 111 0000 011 1222223332 3467889999999988876 5666
Q ss_pred HHhhcCCHHHHHHHHHHHhcCCCCcchhhhhhhHHhhcccCCc
Q psy4703 297 KEALIEDKPALAALVDVASSVKYKNVWNGTQSDALKDVDKAFD 339 (401)
Q Consensus 297 ke~~~~d~~~l~~l~~~~~~~~~~~~~~~~~~~~~~n~~~~~~ 339 (401)
...|++ ...++.|++++++. |..+..-++ ..|.|+.++.+
T Consensus 394 ~~~L~~-~g~i~~L~~LL~~~-d~~i~~~~L-~aL~nil~~~~ 433 (510)
T 3ul1_B 394 IVYLVH-CGIIEPLMNLLSAK-DTKIIQVIL-DAISNIFQAAE 433 (510)
T ss_dssp HHHHHH-TTCHHHHHHGGGCS-CHHHHHHHH-HHHHHHHHHHH
T ss_pred HHHHHH-CCCHHHHHHHhcCC-CHHHHHHHH-HHHHHHHHHhH
Confidence 666664 46789999999888 888888888 88889876544
No 282
>1zbp_A Hypothetical protein VPA1032; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.40A {Vibrio parahaemolyticus} SCOP: e.61.1.1
Probab=89.78 E-value=4.1 Score=37.85 Aligned_cols=63 Identities=16% Similarity=0.280 Sum_probs=57.2
Q ss_pred HHHHHcCCHHHHHHHHHHHHhhcCCCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHH
Q psy4703 17 NSAFKQGDYETALDFYTKALKVTAEESHERATCLKNRAAVYLKQNQNDKVIEDCSKSLEIVPDDPKA 83 (401)
Q Consensus 17 n~~~~~g~y~eAi~~y~~Al~l~~p~~~~~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~ldP~~~kA 83 (401)
..+++.|+.++|+......|+.. |. ++.....+-..+.-.|+|+.|...++.+.+++|.....
T Consensus 5 ~~ll~~g~L~~al~~~~~~VR~~-P~---da~~R~~LfqLLcv~G~w~RA~~QL~~~a~l~p~~~~~ 67 (273)
T 1zbp_A 5 KNALSEGQLQQALELLIEAIKAS-PK---DASLRSSFIELLCIDGDFERADEQLMQSIKLFPEYLPG 67 (273)
T ss_dssp HHHTTTTCHHHHHHHHHHHHHTC-TT---CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCGGGHHH
T ss_pred HHHHhCCCHHHHHHHHHHHHHhC-Cc---CHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCchhhHH
Confidence 46788999999999999999999 76 88888888899999999999999999999999987653
No 283
>1xqr_A HSPBP1 protein; armadillo repeat, superhelical twist, chaperone; 2.10A {Homo sapiens} SCOP: a.118.1.21 PDB: 1xqs_A*
Probab=89.58 E-value=1.8 Score=40.79 Aligned_cols=143 Identities=13% Similarity=0.160 Sum_probs=88.3
Q ss_pred CCChhHHHHHHHHHHHhhhcchh-hHHHhhhhHHHHHHHHhhccCchhHHhh----HHHHH--------HHHHHhcHHHH
Q psy4703 153 SAPMDKRVTAVNNLVVLAREMSG-AEMLLKSGVAKQINTLLKCETNEEIYLG----EEDFI--------TSIIKQGVDIL 219 (401)
Q Consensus 153 ~~~~~~~~~a~~~L~~l~~~~~g-ae~~~~e~~v~~L~~ll~~~~~~e~~lA----~e~fi--------~~i~~~gv~~L 219 (401)
.++.+.+..++..+......++. ...+...+++..|..+++.+.++.+... ..+++ .++..+|++.|
T Consensus 93 s~~~~vr~~Aa~~Lg~ia~~n~~~~~~vv~~g~l~~Ll~LL~~~~~~~v~~~A~~ALsnl~~~~~~~~~~~~~~ggi~~L 172 (296)
T 1xqr_A 93 AGAAGLRWRAAQLIGTCSQNVAAIQEQVLGLGALRKLLRLLDRDACDTVRVKALFAISCLVREQEAGLLQFLRLDGFSVL 172 (296)
T ss_dssp CSSHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHHHCSCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHhCCHHHHHHHHHCCCHHHHHHHHccCCCHHHHHHHHHHHHHHHcCCcHHHHHHHHCCCHHHH
Confidence 45667788888888777665443 3555567889999999983234444322 22222 22345789999
Q ss_pred HHHHcCCChhHHHHHHHhhhhccccCCCCCCCCCC-CCCchHHHHHHHHhhhcCCCCCchhHHhHHhhhhhccCC-HHHH
Q psy4703 220 KRLYMSKNENIRVRALVGLCKLGSMGGSDASIRPF-ADGSTRKLAEACRRFLVNPARDPDIRRWAAEGLAYLTLD-AEVK 297 (401)
Q Consensus 220 k~l~~s~~d~i~~ralvgLckl~~~gg~d~~~~~~-~~~s~~~l~~~~~~~l~~~~~~~~~~~~~~eglay~~~~-~~vk 297 (401)
-.++++++..++..|...|+.+... ++.....+ ..|-...|++ +|. ..+++.+..|..+|..+.-. +...
T Consensus 173 ~~lL~~~d~~v~~~A~~aLs~L~~~--~~~~~~~vv~~g~i~~Lv~----LL~--~~d~~v~~~al~aL~~l~~~~~~~~ 244 (296)
T 1xqr_A 173 MRAMQQQVQKLKVKSAFLLQNLLVG--HPEHKGTLCSMGMVQQLVA----LVR--TEHSPFHEHVLGALCSLVTDFPQGV 244 (296)
T ss_dssp HHHHHSSCHHHHHHHHHHHHHHHHH--CGGGHHHHHHTTHHHHHHH----HHT--SCCSTHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHhC--ChHHHHHHHHcCCHHHHHH----HHc--CCChhHHHHHHHHHHHHHhCChhHH
Confidence 9999999999999999888887753 21111111 1122222222 232 33678899999999776543 5555
Q ss_pred HhhcCC
Q psy4703 298 EALIED 303 (401)
Q Consensus 298 e~~~~d 303 (401)
+....+
T Consensus 245 ~~~~~~ 250 (296)
T 1xqr_A 245 RECREP 250 (296)
T ss_dssp HHHHCG
T ss_pred HHHhcc
Confidence 444433
No 284
>4b4t_P 26S proteasome regulatory subunit RPN5; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=89.39 E-value=6 Score=39.33 Aligned_cols=103 Identities=12% Similarity=0.021 Sum_probs=79.4
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcC--CCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHH---hCCCCH-
Q psy4703 8 DYNKLKESGNSAFKQGDYETALDFYTKALKVTA--EESHERATCLKNRAAVYLKQNQNDKVIEDCSKSLE---IVPDDP- 81 (401)
Q Consensus 8 ~a~~l~~~Gn~~~~~g~y~eAi~~y~~Al~l~~--p~~~~~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~---ldP~~~- 81 (401)
.+......+..++..|+|.+|.........-.. -+......++......|+..++|.+|...++++.. -.+.++
T Consensus 136 rarl~~~La~i~e~~g~~~eA~~iL~~l~~Et~~~~~~~~kve~~l~q~rl~l~~~d~~~a~~~~~ki~~~~~~~~~~~~ 215 (445)
T 4b4t_P 136 RARVTKDLVEIKKEEGKIDEAADILCELQVETYGSMEMSEKIQFILEQMELSILKGDYSQATVLSRKILKKTFKNPKYES 215 (445)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCSSSCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSSCCHH
T ss_pred HHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhcccCCcHH
Confidence 455667789999999999999999988643221 11234567888889999999999999999998742 233333
Q ss_pred ---HHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Q psy4703 82 ---KALFRRCQAYEAIGKFEEAYTDAKHIHRV 110 (401)
Q Consensus 82 ---kA~~~~a~a~~~lg~~eeA~~~~~kal~l 110 (401)
..+...|..+...++|.+|..+|..+++.
T Consensus 216 lk~~~~~~~~~~~~~e~~y~~a~~~y~e~~~~ 247 (445)
T 4b4t_P 216 LKLEYYNLLVKISLHKREYLEVAQYLQEIYQT 247 (445)
T ss_dssp HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhc
Confidence 34666789999999999999999988764
No 285
>3opb_A SWI5-dependent HO expression protein 4; heat and arm fold, myosin folding and function, myosin bindi protein, protein binding; 2.90A {Saccharomyces cerevisiae}
Probab=89.27 E-value=1.1 Score=47.74 Aligned_cols=122 Identities=11% Similarity=0.037 Sum_probs=88.5
Q ss_pred hcHHHHHHHHcCCChhHHHHHHHhhhhccccCCCCCCC-CCCCCCchHHHHHHHHhhhc-CCCCCchhHHhHHhhhhhcc
Q psy4703 214 QGVDILKRLYMSKNENIRVRALVGLCKLGSMGGSDASI-RPFADGSTRKLAEACRRFLV-NPARDPDIRRWAAEGLAYLT 291 (401)
Q Consensus 214 ~gv~~Lk~l~~s~~d~i~~ralvgLckl~~~gg~d~~~-~~~~~~s~~~l~~~~~~~l~-~~~~~~~~~~~~~eglay~~ 291 (401)
++++.|..++.++++.|+..|.-.+|-+..... .+ ..|.....-.-.+...-++. -...|.++|+.|+-.||-+|
T Consensus 606 ga~~~L~~LL~s~n~~VrrAA~elI~NL~~~~e---~i~~k~~~~~~~~~~~rL~lLV~Ll~s~D~~~r~AAagALAnLt 682 (778)
T 3opb_A 606 VYWSTIENLMLDENVPLQRSTLELISNMMSHPL---TIAAKFFNLENPQSLRNFNILVKLLQLSDVESQRAVAAIFANIA 682 (778)
T ss_dssp HHHHHHHHGGGCSSHHHHHHHHHHHHHHHTSGG---GTGGGTSCCSSHHHHHHHHHHHHGGGCSCHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHhCCCHHHHHHHHHHHHHHhCCcH---HHHHHHHhhcCchhhccHHHHHHHHcCCCHHHHHHHHHHHHHhc
Confidence 579999999999999999888888888886321 11 12222111111111222211 13468899999999999995
Q ss_pred -CCHHHHHhhcCCHHHHHHHHHHHhcC-CCCcchhhhhhhHHhhcccCCc
Q psy4703 292 -LDAEVKEALIEDKPALAALVDVASSV-KYKNVWNGTQSDALKDVDKAFD 339 (401)
Q Consensus 292 -~~~~vke~~~~d~~~l~~l~~~~~~~-~~~~~~~~~~~~~~~n~~~~~~ 339 (401)
-+|.|-+.+++.+.++..|+.++... ++..+..-++ .++-|+..+-|
T Consensus 683 s~~~~ia~~ll~~~~gi~~Ll~lL~~~~~~~~l~~R~~-~~l~NL~~~~~ 731 (778)
T 3opb_A 683 TTIPLIAKELLTKKELIENAIQVFADQIDDIELRQRLL-MLFFGLFEVIP 731 (778)
T ss_dssp HHCHHHHHHHTTCHHHHHHHHHHHHHTTTCHHHHHHHH-HHHHHHHTTCC
T ss_pred CCChHHHHHHHHccccHHHHHHHHhccCCCHHHHHHHH-HHHHHHHHhhc
Confidence 79999999999999999999999983 3777888888 89999997655
No 286
>3nmz_A APC variant protein; protein-protein complex, armadillo repeats, cell adhesion-CE complex; 3.01A {Homo sapiens}
Probab=89.15 E-value=8.8 Score=38.33 Aligned_cols=169 Identities=18% Similarity=0.158 Sum_probs=103.8
Q ss_pred HHHHHHHHhhhcchhhHHHhhhhHHHHHHHHhhcc----------CchhHHh-h---HHHHH-------HHHH-Hhc-HH
Q psy4703 161 TAVNNLVVLAREMSGAEMLLKSGVAKQINTLLKCE----------TNEEIYL-G---EEDFI-------TSII-KQG-VD 217 (401)
Q Consensus 161 ~a~~~L~~l~~~~~gae~~~~e~~v~~L~~ll~~~----------~~~e~~l-A---~e~fi-------~~i~-~~g-v~ 217 (401)
++...|.-++..++--..+...|++..|..++..+ .++.+.. | ..+.. ..+. ..| ++
T Consensus 167 qAv~aL~nls~~~e~R~~i~~~G~l~~Lv~LL~~~~~~~~~~~~~~~~~l~~~Aa~aL~nLa~~~~~~k~~i~~~~GaIp 246 (458)
T 3nmz_A 167 PAVCVLMKLSFDEEHRHAMNELGGLQAIAELLQVDCEMYGLTNDHYSITLRRYAGMALTNLTFGDVANKATLCSMKGCMR 246 (458)
T ss_dssp HHHHHHHHHTTSHHHHHHHHHTTHHHHHHHHHHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHCHHHHH
T ss_pred HHHHHHHHhcCCHHHHHHHHHCCCHHHHHHHHhhhhcccccccCCCCHHHHHHHHHHHHHHhCCCcccHHHHHHcCCcHH
Confidence 44444444444333344555678888888888410 1122211 1 11111 2232 456 99
Q ss_pred HHHHHHcCCChhHHHHHHHhhhhccccCCCCCCCCCCC-CCchHHHHHHHHhhhcCCCCCchhHHhHHhhhhhccC-CHH
Q psy4703 218 ILKRLYMSKNENIRVRALVGLCKLGSMGGSDASIRPFA-DGSTRKLAEACRRFLVNPARDPDIRRWAAEGLAYLTL-DAE 295 (401)
Q Consensus 218 ~Lk~l~~s~~d~i~~ralvgLckl~~~gg~d~~~~~~~-~~s~~~l~~~~~~~l~~~~~~~~~~~~~~eglay~~~-~~~ 295 (401)
.|-+++++++++++..|...|..|.. +.++.+..... .|..-.|.+. |. ...+.+.++.|+--|.-+|. ..+
T Consensus 247 ~LV~LL~s~~~~v~~~A~~aL~nLs~-~~~~~~k~~I~~~GaI~~LV~l----Ll-~s~~~~v~~~A~~aL~nLs~~~~~ 320 (458)
T 3nmz_A 247 ALVAQLKSESEDLQQVIASVLRNLSW-RADVNSKKTLREVGSVKALMEC----AL-EVKKESTLKSVLSALWNLSAHCTE 320 (458)
T ss_dssp HHHHGGGCSCHHHHHHHHHHHHHHTS-SCCHHHHHHHHHTTHHHHHHHH----HT-TCCSHHHHHHHHHHHHHHHHHCHH
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHhc-CCCHHHHHHHHHcCCHHHHHHH----Hh-cCCCHHHHHHHHHHHHHHccCCHH
Confidence 99999999999999888888877743 11111111111 1222222222 22 23366788889999999998 889
Q ss_pred HHHhhcCCHHHHHHHHHHHhcCCCC---cchhhhhhhHHhhccc
Q psy4703 296 VKEALIEDKPALAALVDVASSVKYK---NVWNGTQSDALKDVDK 336 (401)
Q Consensus 296 vke~~~~d~~~l~~l~~~~~~~~~~---~~~~~~~~~~~~n~~~ 336 (401)
.|..++.+...|..|++++.+..+. .+.--++ .++.||+.
T Consensus 321 nk~~I~~~~Gal~~Lv~LL~~~~~~~~~~v~~~A~-~aL~nLs~ 363 (458)
T 3nmz_A 321 NKADICAVDGALAFLVGTLTYRSQTNTLAIIESGG-GILRNVSS 363 (458)
T ss_dssp HHHHHHHSTTHHHHHHHHTTCCCSSSTTHHHHHHH-HHHHHHHH
T ss_pred HHHHHHHhcCcHHHHHHHhcCCCCcchHHHHHHHH-HHHHHHHh
Confidence 9999998889999999999877332 2556566 78899986
No 287
>2vgl_B AP-2 complex subunit beta-1; cytoplasmic vesicle, alternative splicing, endocytosis, lipid-binding, golgi apparatus, adaptor, membrane, transport; HET: IHP; 2.59A {Homo sapiens} SCOP: i.23.1.1 PDB: 2jkt_B 2jkr_B* 2xa7_B 1w63_B
Probab=88.29 E-value=2.4 Score=43.61 Aligned_cols=133 Identities=23% Similarity=0.227 Sum_probs=84.7
Q ss_pred HHHHHHHhhccCchhH-HhhHH---HHHHH---HHHhcHHHHHHHHcCCChhHHHHHHHhhhhccccCCCCCCCCCCCCC
Q psy4703 185 AKQINTLLKCETNEEI-YLGEE---DFITS---IIKQGVDILKRLYMSKNENIRVRALVGLCKLGSMGGSDASIRPFADG 257 (401)
Q Consensus 185 v~~L~~ll~~~~~~e~-~lA~e---~fi~~---i~~~gv~~Lk~l~~s~~d~i~~ralvgLckl~~~gg~d~~~~~~~~~ 257 (401)
+..+.++++ +.+.++ .++|- .+... ..--.+..|.+-+++.|+.+|..|+-.||.++.. .
T Consensus 51 ~~~vi~l~~-s~~~~~Krl~yl~l~~~~~~~~e~~~l~~n~l~kdL~~~n~~ir~~AL~~L~~i~~~------------~ 117 (591)
T 2vgl_B 51 FPDVVNCMQ-TDNLELKKLVYLYLMNYAKSQPDMAIMAVNSFVKDCEDPNPLIRALAVRTMGCIRVD------------K 117 (591)
T ss_dssp HHHHHHTTS-SSCHHHHHHHHHHHHHHHHHSHHHHHTTHHHHGGGSSSSSHHHHHHHHHHHHTCCSG------------G
T ss_pred HHHHHHHhC-CCCHHHHHHHHHHHHHHcccCchHHHHHHHHHHHHcCCCCHHHHHHHHHHHHcCChH------------H
Confidence 444555666 455544 44542 22221 1112344555556678888999998888888621 2
Q ss_pred chHHHHHHHHhhhcCCCCCchhHHhHHhhhhhcc-CCHHHHHhhcCCHHHHHHHHHHHhcCCCCcchhhhhhhHHhhccc
Q psy4703 258 STRKLAEACRRFLVNPARDPDIRRWAAEGLAYLT-LDAEVKEALIEDKPALAALVDVASSVKYKNVWNGTQSDALKDVDK 336 (401)
Q Consensus 258 s~~~l~~~~~~~l~~~~~~~~~~~~~~eglay~~-~~~~vke~~~~d~~~l~~l~~~~~~~~~~~~~~~~~~~~~~n~~~ 336 (401)
-...|...+.+.|. ..++..|+-|+..|.-+. ..|++- .|..++..|.+++.+. +..|.++++ +.|.++..
T Consensus 118 ~~~~l~~~l~~~L~--d~~~~VRk~A~~al~~i~~~~p~~~----~~~~~~~~l~~lL~d~-d~~V~~~A~-~aL~~i~~ 189 (591)
T 2vgl_B 118 ITEYLCEPLRKCLK--DEDPYVRKTAAVCVAKLHDINAQMV----EDQGFLDSLRDLIADS-NPMVVANAV-AALSEISE 189 (591)
T ss_dssp GHHHHHHHHHHHSS--CSCHHHHHHHHHHHHHHHHSSCCCH----HHHHHHHHHHHTTSCS-CHHHHHHHH-HHHHHHTT
T ss_pred HHHHHHHHHHHHcC--CCChHHHHHHHHHHHHHHhhChhhc----ccccHHHHHHHHhCCC-ChhHHHHHH-HHHHHHHh
Confidence 23346667888775 347889999999998663 445432 3456777888888765 777888888 88888776
Q ss_pred CC
Q psy4703 337 AF 338 (401)
Q Consensus 337 ~~ 338 (401)
.-
T Consensus 190 ~~ 191 (591)
T 2vgl_B 190 SH 191 (591)
T ss_dssp SC
T ss_pred hC
Confidence 43
No 288
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=88.29 E-value=8.2 Score=37.83 Aligned_cols=101 Identities=9% Similarity=0.104 Sum_probs=67.9
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhhcC---------------------CC-------------------Ccch--H
Q psy4703 10 NKLKESGNSAFKQGDYETALDFYTKALKVTA---------------------EE-------------------SHER--A 47 (401)
Q Consensus 10 ~~l~~~Gn~~~~~g~y~eAi~~y~~Al~l~~---------------------p~-------------------~~~~--~ 47 (401)
.+....|..|.+.|++++-.++.......-. |+ +... .
T Consensus 20 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~kak~~k~v~~l~~~~~~~~~~~~~~~~~~~~~~~~a~~~~r~flr~ 99 (394)
T 3txn_A 20 QGILQQGELYKQEGKAKELADLIKVTRPFLSSISKAKAAKLVRSLVDMFLDMDAGTGIEVQLCKDCIEWAKQEKRTFLRQ 99 (394)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHTTTGGGGSCHHHHHHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4667889999999999988887644322210 11 0111 1
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC------CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Q psy4703 48 TCLKNRAAVYLKQNQNDKVIEDCSKSLEIVPD------DPKALFRRCQAYEAIGKFEEAYTDAKHIHRV 110 (401)
Q Consensus 48 ~~~~n~a~~y~klg~y~~Ai~~~~kAL~ldP~------~~kA~~~~a~a~~~lg~~eeA~~~~~kal~l 110 (401)
.+-..+|..|+..|+|.+|+..+.+.++-... -...+....+.|..++++..+...|.++...
T Consensus 100 ~l~~kL~~l~~~~~~y~~a~~~i~~l~~~~~~~dd~~~llev~lle~~~~~~~~n~~k~k~~l~~a~~~ 168 (394)
T 3txn_A 100 SLEARLIALYFDTALYTEALALGAQLLRELKKLDDKNLLVEVQLLESKTYHALSNLPKARAALTSARTT 168 (394)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSSCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHhccHHHHHHHHHHHHhh
Confidence 12336788888888888888888877764211 1455777788888888888888888887655
No 289
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=87.52 E-value=12 Score=32.30 Aligned_cols=53 Identities=19% Similarity=0.049 Sum_probs=43.5
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHH
Q psy4703 47 ATCLKNRAAVYLKQNQNDKVIEDCSKSLEIVPDDPKALFRRCQAYEAIGKFEEAYTDAKHI 107 (401)
Q Consensus 47 ~~~~~n~a~~y~klg~y~~Ai~~~~kAL~ldP~~~kA~~~~a~a~~~lg~~eeA~~~~~ka 107 (401)
+...+.+| ++.|+++.|.+.++.. ++..-|.++|..-+..|+++-|..+|+++
T Consensus 8 ~~~rF~LA---L~lg~l~~A~e~a~~l-----~~~~~Wk~Lg~~AL~~gn~~lAe~cy~~~ 60 (177)
T 3mkq_B 8 PHIRFDLA---LEYGNLDAALDEAKKL-----NDSITWERLIQEALAQGNASLAEMIYQTQ 60 (177)
T ss_dssp HHHHHHHH---HHTTCHHHHHHHHHHH-----CCHHHHHHHHHHHHHTTCHHHHHHHHHHT
T ss_pred hHHHHHHH---HhcCCHHHHHHHHHHh-----CCHHHHHHHHHHHHHcCChHHHHHHHHHh
Confidence 44444444 5789999999988765 57888999999999999999999999876
No 290
>3tt9_A Plakophilin-2; cell adhesion; 1.55A {Homo sapiens}
Probab=87.41 E-value=0.45 Score=43.41 Aligned_cols=118 Identities=17% Similarity=0.175 Sum_probs=83.1
Q ss_pred HHhcHHHHHHHHcCCChhHHHHHHHhhhhccccCCCCCC-CCCCCCCchHHHHHHHHhhhcCCCCCchhHHhHHhhhhhc
Q psy4703 212 IKQGVDILKRLYMSKNENIRVRALVGLCKLGSMGGSDAS-IRPFADGSTRKLAEACRRFLVNPARDPDIRRWAAEGLAYL 290 (401)
Q Consensus 212 ~~~gv~~Lk~l~~s~~d~i~~ralvgLckl~~~gg~d~~-~~~~~~~s~~~l~~~~~~~l~~~~~~~~~~~~~~eglay~ 290 (401)
..+|++.|-++++++++.++..|...|.-|.. +++.+ ......|..-.|.+.+++ ..+.+.++.|+--|-.+
T Consensus 50 ~~G~Ip~LV~lL~s~~~~vq~~Aa~aL~nLa~--~~~~nk~~I~~~GaI~~Lv~lL~~-----~~~~~~~e~a~~aL~nL 122 (233)
T 3tt9_A 50 QLRGILKLLQLLKVQNEDVQRAVCGALRNLVF--EDNDNKLEVAELNGVPRLLQVLKQ-----TRDLETKKQITGLLWNL 122 (233)
T ss_dssp HTTHHHHHHHGGGCCCHHHHHHHHHHHHHHHT--TCHHHHHHHHHTTHHHHHHHHHHH-----CCCHHHHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHcCCCHHHHHHHHHHHHHHHh--CCHHHHHHHHHcCCHHHHHHHHcc-----CCCHHHHHHHHHHHHHH
Confidence 44669999999999999999888888887764 22221 111123555556665543 34678899999999999
Q ss_pred cCCHHHHHhhcCCHHHHHHHHHHHh---cC------------CCCcchhhhhhhHHhhcccCCc
Q psy4703 291 TLDAEVKEALIEDKPALAALVDVAS---SV------------KYKNVWNGTQSDALKDVDKAFD 339 (401)
Q Consensus 291 ~~~~~vke~~~~d~~~l~~l~~~~~---~~------------~~~~~~~~~~~~~~~n~~~~~~ 339 (401)
|..++.|..+++ ..+..|++++. +. .+..+.+-+. .++-||+-.-+
T Consensus 123 S~~~~~k~~i~~--~~i~~Lv~ll~~p~sG~~~~~~~~~~~~~~~~v~~na~-~~L~nLss~~~ 183 (233)
T 3tt9_A 123 SSNDKLKNLMIT--EALLTLTENIIIPFSGWPEGDYPKANGLLDFDIFYNVT-GCLRNMSSAGA 183 (233)
T ss_dssp HTSGGGHHHHHH--HHHHHHCCCCCHHHHCCCGGGCCCCCTTCCHHHHHHHH-HHHHHHTTSCH
T ss_pred HcChhhHHHHHh--ccHHHHHHHHhccccCCcccccccccccchHHHHHHHH-HHHHHHhcCCH
Confidence 999999999986 47888888642 11 1335667777 89999985443
No 291
>4ady_A RPN2, 26S proteasome regulatory subunit RPN2; protein binding, PC repeat; 2.70A {Saccharomyces cerevisiae} PDB: 4b4t_N
Probab=87.02 E-value=14 Score=40.48 Aligned_cols=246 Identities=12% Similarity=0.041 Sum_probs=119.3
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcCC-------CCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH
Q psy4703 9 YNKLKESGNSAFKQGDYETALDFYTKALKVTAE-------ESHERATCLKNRAAVYLKQNQNDKVIEDCSKSLEIVPDDP 81 (401)
Q Consensus 9 a~~l~~~Gn~~~~~g~y~eAi~~y~~Al~l~~p-------~~~~~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~ldP~~~ 81 (401)
.-++...|..+...+ .+++.++...+.-+ . .......+-..+|.+|+..++ ++++......+.-+....
T Consensus 413 ~GAllaLGli~ag~~--~~~~~lL~~~L~~~-~~~~~~~~~~~ir~gAaLGLGla~~GS~~-eev~e~L~~~L~dd~~~~ 488 (963)
T 4ady_A 413 GGSLYGLGLIYAGFG--RDTTDYLKNIIVEN-SGTSGDEDVDVLLHGASLGIGLAAMGSAN-IEVYEALKEVLYNDSATS 488 (963)
T ss_dssp HHHHHHHHHHTTTTT--HHHHHHHHHHHHHH-SSCCSCHHHHHHHHHHHHHHHHHSTTCCC-HHHHHHHHHHHHTCCHHH
T ss_pred HHHHHHHHHhcCCCc--HHHHHHHHHHHcCc-cccccccccHHHHHHHHHHHHHHhcCCCC-HHHHHHHHHHHhcCCHHH
Confidence 345555565555444 47888888877655 2 011233455567777776665 567788888887553222
Q ss_pred --HHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCccHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHhhcCCCChh
Q psy4703 82 --KALFRRCQAYEAIGKFEEAYTDAKHIHRVEPTNKAIQPVLSRLFAI--VTKRMQENEQLQNKVHNMFKYVFDTSAPMD 157 (401)
Q Consensus 82 --kA~~~~a~a~~~lg~~eeA~~~~~kal~l~P~~~~~~~~L~~l~~~--~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~ 157 (401)
-|-+-+|.++...|+-+-....++.+.+ +. +..+...+...... .++. ..+..+.+.+.. ..+.-
T Consensus 489 ~~~AalALGli~vGTgn~~ai~~LL~~~~e-~~-~e~vrR~aalgLGll~~g~~--------e~~~~li~~L~~-~~dp~ 557 (963)
T 4ady_A 489 GEAAALGMGLCMLGTGKPEAIHDMFTYSQE-TQ-HGNITRGLAVGLALINYGRQ--------ELADDLITKMLA-SDESL 557 (963)
T ss_dssp HHHHHHHHHHHHTTCCCHHHHHHHHHHHHH-CS-CHHHHHHHHHHHHHHTTTCG--------GGGHHHHHHHHH-CSCHH
T ss_pred HHHHHHHHhhhhcccCCHHHHHHHHHHHhc-cC-cHHHHHHHHHHHHhhhCCCh--------HHHHHHHHHHHh-CCCHH
Confidence 3455667777777776544444444443 22 22222222111111 1111 111122222222 12222
Q ss_pred HHHHHHHHHHH--hhhcchhhHHHhhhhHHHHHHHHhhccCchhHHhhHHHHHHHHH-----HhcHHHHHHHHcCCChhH
Q psy4703 158 KRVTAVNNLVV--LAREMSGAEMLLKSGVAKQINTLLKCETNEEIYLGEEDFITSII-----KQGVDILKRLYMSKNENI 230 (401)
Q Consensus 158 ~~~~a~~~L~~--l~~~~~gae~~~~e~~v~~L~~ll~~~~~~e~~lA~e~fi~~i~-----~~gv~~Lk~l~~s~~d~i 230 (401)
.|..++..+.. .|- |- ..++..|...+..+.+++++.+--.- .+.. +....++..+.++.++.|
T Consensus 558 vRygaa~alglAyaGT---Gn-----~~aIq~LL~~~~~d~~d~VRraAVia-LGlI~~g~~e~v~rlv~~L~~~~d~~V 628 (963)
T 4ady_A 558 LRYGGAFTIALAYAGT---GN-----NSAVKRLLHVAVSDSNDDVRRAAVIA-LGFVLLRDYTTVPRIVQLLSKSHNAHV 628 (963)
T ss_dssp HHHHHHHHHHHHTTTS---CC-----HHHHHHHHHHHHHCSCHHHHHHHHHH-HHHHTSSSCSSHHHHTTTGGGCSCHHH
T ss_pred HHHHHHHHHHHHhcCC---CC-----HHHHHHHHHHhccCCcHHHHHHHHHH-HHhhccCCHHHHHHHHHHHHhcCCHHH
Confidence 22222222211 010 00 11133233332212223331110000 1111 112344455666889999
Q ss_pred HHHHHHhhhhccccCCCCCCCCCCCCCchHHHHHHHHhhhcCCCCCchhHHhHHhhhhhccC
Q psy4703 231 RVRALVGLCKLGSMGGSDASIRPFADGSTRKLAEACRRFLVNPARDPDIRRWAAEGLAYLTL 292 (401)
Q Consensus 231 ~~ralvgLckl~~~gg~d~~~~~~~~~s~~~l~~~~~~~l~~~~~~~~~~~~~~eglay~~~ 292 (401)
|..+..+|.-++++. | ..+..+...+++- ..|.+.|+.|+.+|+.+-.
T Consensus 629 R~gAalALGli~aGn-----------~-~~~aid~L~~L~~--D~d~~Vrq~Ai~ALG~Ig~ 676 (963)
T 4ady_A 629 RCGTAFALGIACAGK-----------G-LQSAIDVLDPLTK--DPVDFVRQAAMIALSMILI 676 (963)
T ss_dssp HHHHHHHHHHHTSSS-----------C-CHHHHHHHHHHHT--CSSHHHHHHHHHHHHHHST
T ss_pred HHHHHHHHHHhccCC-----------C-cHHHHHHHHHHcc--CCCHHHHHHHHHHHHHHhc
Confidence 998888888777532 2 2356667777763 3477899999999998864
No 292
>3nmw_A APC variant protein; ARMADIILO repeats domain, cell adhesion-cell cycle complex; 1.60A {Homo sapiens} PDB: 3nmx_A 3t7u_A 3au3_A 3qhe_A
Probab=86.55 E-value=5.9 Score=38.13 Aligned_cols=173 Identities=15% Similarity=0.066 Sum_probs=100.4
Q ss_pred hHHHHHHHHHHHhhhcchhhHHHh-hhhH-HHHHHHHhhccCchhHHhh---------H---HHHHHHHH-HhcHHHHHH
Q psy4703 157 DKRVTAVNNLVVLAREMSGAEMLL-KSGV-AKQINTLLKCETNEEIYLG---------E---EDFITSII-KQGVDILKR 221 (401)
Q Consensus 157 ~~~~~a~~~L~~l~~~~~gae~~~-~e~~-v~~L~~ll~~~~~~e~~lA---------~---e~fi~~i~-~~gv~~Lk~ 221 (401)
..+..++..|.-+...+......+ ..+| +..|..+++ +.++++... + +..-..+. .+|++.|-+
T Consensus 99 ~~q~~Aa~aL~nLa~~~~~~k~~i~~~~GaIp~LV~LL~-s~~~~v~~~A~~aL~nLs~~~~~~~k~~i~~~G~Ip~Lv~ 177 (354)
T 3nmw_A 99 TLRRYAGMALTNLTFGDVANKATLCSMKGCMRALVAQLK-SESEDLQQVIASVLRNLSWRADVNSKKTLREVGSVKALME 177 (354)
T ss_dssp HHHHHHHHHHHHHTSSCHHHHHHHHHCHHHHHHHHHGGG-CSCHHHHHHHHHHHHHHHTTCCHHHHHHHHHTTHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHcCCcHHHHHHHHC-CCCHHHHHHHHHHHHHHhccCCHHHHHHHHHCCCHHHHHH
Confidence 345555556665555444333333 3445 888888887 556665332 1 11223343 456888888
Q ss_pred H-HcCCChhHHHHHHHhhhhccccCCCCCCCCCC--CCCchHHHHHHHHhhhcCCCC--CchhHHhHHhhhhhcc----C
Q psy4703 222 L-YMSKNENIRVRALVGLCKLGSMGGSDASIRPF--ADGSTRKLAEACRRFLVNPAR--DPDIRRWAAEGLAYLT----L 292 (401)
Q Consensus 222 l-~~s~~d~i~~ralvgLckl~~~gg~d~~~~~~--~~~s~~~l~~~~~~~l~~~~~--~~~~~~~~~eglay~~----~ 292 (401)
+ .+++++.+...|+..|..|... .+.....+ ..|..--|++..+ .++. +.+.++.|+=-|.++| -
T Consensus 178 lL~~~~~~~~~~~A~~aL~nLs~~--~~~nk~~i~~~~Gai~~Lv~lL~----~~~~~~~~~v~~~A~~aL~nLs~~~a~ 251 (354)
T 3nmw_A 178 CALEVKKESTLKSVLSALWNLSAH--CTENKADICAVDGALAFLVGTLT----YRSQTNTLAIIESGGGILRNVSSLIAT 251 (354)
T ss_dssp HHHHCCCHHHHHHHHHHHHHHHTT--CHHHHHHHHHSTTHHHHHHHHTT----CCCSSSCCHHHHHHHHHHHHHHHHHTT
T ss_pred HHhcCCCHHHHHHHHHHHHHHHcc--ChhhhHHHHHhcCcHHHHHHHhc----cCCCcccHHHHHHHHHHHHHHHhhccC
Confidence 6 4577777766555455444321 11111111 2344433444332 2221 1146776777777777 4
Q ss_pred CHHHHHhhcCCHHHHHHHHHHHhcCCCCcchhhhhhhHHhhcccCCc
Q psy4703 293 DAEVKEALIEDKPALAALVDVASSVKYKNVWNGTQSDALKDVDKAFD 339 (401)
Q Consensus 293 ~~~vke~~~~d~~~l~~l~~~~~~~~~~~~~~~~~~~~~~n~~~~~~ 339 (401)
.++.++.+++ ...+..|++++++. +..+.--.+ .++.||+..-+
T Consensus 252 ~~~~~~~i~~-~g~i~~Lv~lL~~~-~~~v~~~A~-~aL~nLa~~~~ 295 (354)
T 3nmw_A 252 NEDHRQILRE-NNCLQTLLQHLKSH-SLTIVSNAC-GTLWNLSARNP 295 (354)
T ss_dssp CHHHHHHHHT-TTHHHHHHHHTTCS-CHHHHHHHH-HHHHHHTSSCH
T ss_pred CHHHHHHHHH-cCCHHHHHHHHcCC-ChHHHHHHH-HHHHHHhCCCH
Confidence 8999977764 56799999999987 566777778 89999995444
No 293
>1oyz_A Hypothetical protein YIBA; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.10A {Escherichia coli} SCOP: a.118.1.16
Probab=86.36 E-value=18 Score=32.44 Aligned_cols=177 Identities=12% Similarity=0.025 Sum_probs=75.8
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHH----HHHHHHHhhCCCCccHHHHHH
Q psy4703 47 ATCLKNRAAVYLKQNQNDKVIEDCSKSLEIVPDDPKALFRRCQAYEAIGKFEEAY----TDAKHIHRVEPTNKAIQPVLS 122 (401)
Q Consensus 47 ~~~~~n~a~~y~klg~y~~Ai~~~~kAL~ldP~~~kA~~~~a~a~~~lg~~eeA~----~~~~kal~l~P~~~~~~~~L~ 122 (401)
......-+.++...+. ..++....+.+. + .++.....-+.++..+|....++ ..+...+.-++ ++.+.....
T Consensus 37 ~~vr~~A~~~L~~~~~-~~~~~~L~~~l~-d-~~~~vR~~A~~aL~~l~~~~~~~~~l~~~L~~~~~~d~-~~~vr~~a~ 112 (280)
T 1oyz_A 37 SLKRISSARVLQLRGG-QDAVRLAIEFCS-D-KNYIRRDIGAFILGQIKICKKCEDNVFNILNNMALNDK-SACVRATAI 112 (280)
T ss_dssp HHHHHHHHHHHHHHCC-HHHHHHHHHHHT-C-SSHHHHHHHHHHHHHSCCCTTTHHHHHHHHHHHHHHCS-CHHHHHHHH
T ss_pred HHHHHHHHHHHHccCC-chHHHHHHHHHc-C-CCHHHHHHHHHHHHHhccccccchHHHHHHHHHHhcCC-CHHHHHHHH
Confidence 3444444444445554 456666666654 3 34444444455566666432222 22322222233 344443333
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCChhHHHHHHHHHHHhhhcchhhHHHhhhhHHHHHHHHhhccCchhHHh
Q psy4703 123 RLFAIVTKRMQENEQLQNKVHNMFKYVFDTSAPMDKRVTAVNNLVVLAREMSGAEMLLKSGVAKQINTLLKCETNEEIYL 202 (401)
Q Consensus 123 ~l~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~L~~l~~~~~gae~~~~e~~v~~L~~ll~~~~~~e~~l 202 (401)
.....++... ......+...+..++. +++...+..++..|...+.+ ..+..+..+++ +.++.+..
T Consensus 113 ~aL~~l~~~~---~~~~~~~~~~L~~~l~-d~~~~vR~~a~~aL~~~~~~----------~~~~~L~~~l~-d~~~~vr~ 177 (280)
T 1oyz_A 113 ESTAQRCKKN---PIYSPKIVEQSQITAF-DKSTNVRRATAFAISVINDK----------ATIPLLINLLK-DPNGDVRN 177 (280)
T ss_dssp HHHHHHHHHC---GGGHHHHHHHHHHHTT-CSCHHHHHHHHHHHHTC-------------CCHHHHHHHHT-CSSHHHHH
T ss_pred HHHHHHhccC---CcccHHHHHHHHHHhh-CCCHHHHHHHHHHHHhcCCH----------HHHHHHHHHHc-CCCHHHHH
Confidence 3332222100 0000112222222222 34455555666555554432 13444555555 44444422
Q ss_pred hHHHHHHHH---HHhcHHHHHHHHcCCChhHHHHHHHhhhhcc
Q psy4703 203 GEEDFITSI---IKQGVDILKRLYMSKNENIRVRALVGLCKLG 242 (401)
Q Consensus 203 A~e~fi~~i---~~~gv~~Lk~l~~s~~d~i~~ralvgLckl~ 242 (401)
+.-..+..+ ....++.|..+++.++..++..|+..|..++
T Consensus 178 ~a~~aL~~~~~~~~~~~~~L~~~l~d~~~~vR~~A~~aL~~~~ 220 (280)
T 1oyz_A 178 WAAFAININKYDNSDIRDCFVEMLQDKNEEVRIEAIIGLSYRK 220 (280)
T ss_dssp HHHHHHHHHTCCCHHHHHHHHHHTTCSCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHhhccCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHhC
Confidence 222222122 1233455556666666667766666666665
No 294
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=86.28 E-value=4.5 Score=42.24 Aligned_cols=81 Identities=20% Similarity=0.183 Sum_probs=57.2
Q ss_pred HHHHHHcCCHHHHHHHHHHHHhhcCCCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHH--------HHhCCCCHHHHHHH
Q psy4703 16 GNSAFKQGDYETALDFYTKALKVTAEESHERATCLKNRAAVYLKQNQNDKVIEDCSKS--------LEIVPDDPKALFRR 87 (401)
Q Consensus 16 Gn~~~~~g~y~eAi~~y~~Al~l~~p~~~~~~~~~~n~a~~y~klg~y~~Ai~~~~kA--------L~ldP~~~kA~~~~ 87 (401)
...+...|++++|.+... .++ ....|.++|..+++.++++.|+.+|.++ |.....+.+.+..+
T Consensus 659 f~~~l~~~~~~~A~~~~~---~~~------~~~~W~~la~~al~~~~~~~A~~~y~~~~d~~~l~~l~~~~~~~~~~~~~ 729 (814)
T 3mkq_A 659 FELALKVGQLTLARDLLT---DES------AEMKWRALGDASLQRFNFKLAIEAFTNAHDLESLFLLHSSFNNKEGLVTL 729 (814)
T ss_dssp HHHHHHHTCHHHHHHHHT---TCC------CHHHHHHHHHHHHHTTCHHHHHHHHHHHTCHHHHHHHHHHTTCHHHHHHH
T ss_pred eehhhhcCCHHHHHHHHH---hhC------cHhHHHHHHHHHHHcCCHHHHHHHHHHccChhhhHHHHHHcCCHHHHHHH
Confidence 455677888888877643 333 6778889999999999999999988875 22234566666677
Q ss_pred HHHHHHcCCHHHHHHHHH
Q psy4703 88 CQAYEAIGKFEEAYTDAK 105 (401)
Q Consensus 88 a~a~~~lg~~eeA~~~~~ 105 (401)
+......|+++.|...|.
T Consensus 730 ~~~a~~~~~~~~A~~~~~ 747 (814)
T 3mkq_A 730 AKDAETTGKFNLAFNAYW 747 (814)
T ss_dssp HHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHcCchHHHHHHHH
Confidence 766666666666665543
No 295
>4b4t_S RPN3, 26S proteasome regulatory subunit RPN3; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=85.77 E-value=1.7 Score=44.24 Aligned_cols=72 Identities=15% Similarity=0.104 Sum_probs=61.2
Q ss_pred cchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC-------HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCcc
Q psy4703 44 HERATCLKNRAAVYLKQNQNDKVIEDCSKSLEIVPDD-------PKALFRRCQAYEAIGKFEEAYTDAKHIHRVEPTNKA 116 (401)
Q Consensus 44 ~~~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~ldP~~-------~kA~~~~a~a~~~lg~~eeA~~~~~kal~l~P~~~~ 116 (401)
...+.++..+=..|+..+.|++|....+++. .|.. ...+|..|.++.-.++|.+|..++..|+...|.+..
T Consensus 228 ~~qa~l~nllLRnYL~~~~y~qA~~lvsk~~--fP~~~~sn~q~~rY~YY~GRI~a~q~~Y~eA~~~L~~A~rkap~~~~ 305 (523)
T 4b4t_S 228 ETKAMLINLILRDFLNNGEVDSASDFISKLE--YPHTDVSSSLEARYFFYLSKINAIQLDYSTANEYIIAAIRKAPHNSK 305 (523)
T ss_dssp CHHHHHHHHHHHHHHHSSCSTTHHHHHHHHC--SCTTTSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTSSCSCSSS
T ss_pred chhHHHHHHHHHHHHccCcHHHHHHHHhcCc--CCcccCCHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCcchh
Confidence 3577888888999999999999999999984 3322 566888999999999999999999999999987654
Q ss_pred H
Q psy4703 117 I 117 (401)
Q Consensus 117 ~ 117 (401)
+
T Consensus 306 a 306 (523)
T 4b4t_S 306 S 306 (523)
T ss_dssp C
T ss_pred h
Confidence 3
No 296
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=82.08 E-value=17 Score=40.17 Aligned_cols=94 Identities=5% Similarity=-0.119 Sum_probs=76.2
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHh-----hcCCCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-CCCHHHH
Q psy4703 11 KLKESGNSAFKQGDYETALDFYTKALK-----VTAEESHERATCLKNRAAVYLKQNQNDKVIEDCSKSLEIV-PDDPKAL 84 (401)
Q Consensus 11 ~l~~~Gn~~~~~g~y~eAi~~y~~Al~-----l~~p~~~~~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~ld-P~~~kA~ 84 (401)
.|...-+.+.+.|+.++|...|.+..+ .. | +...|.-+-..|.+.|++++|...|++..+.. .-|...|
T Consensus 129 TynaLIdglcK~G~leeA~~Lf~eM~~m~~kG~~-P----dvvTYNtLI~Glck~G~~~eA~~Lf~eM~~~G~~PDvvTY 203 (1134)
T 3spa_A 129 RLLAFFKCCLLTDQLPLAHHLLVVHHGQRQKRKL-L----TLDMYNAVMLGWARQGAFKELVYVLFMVKDAGLTPDLLSY 203 (1134)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHSHHHHTT-C----CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCCCCHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHhhcCCC-C----CHhHHHHHHHHHHhCCCHHHHHHHHHHHHHcCCCCcHHHH
Confidence 466777889999999999999977543 23 5 57889999999999999999999999987753 2367788
Q ss_pred HHHHHHHHHcCCH-HHHHHHHHHHHh
Q psy4703 85 FRRCQAYEAIGKF-EEAYTDAKHIHR 109 (401)
Q Consensus 85 ~~~a~a~~~lg~~-eeA~~~~~kal~ 109 (401)
..+-.++.+.|+. ++|...|++..+
T Consensus 204 ntLI~glcK~G~~~e~A~~Ll~EM~~ 229 (1134)
T 3spa_A 204 AAALQCMGRQDQDAGTIERCLEQMSQ 229 (1134)
T ss_dssp HHHHHHHHHHTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCcHHHHHHHHHHHHH
Confidence 8888899999985 778888776654
No 297
>3nmz_A APC variant protein; protein-protein complex, armadillo repeats, cell adhesion-CE complex; 3.01A {Homo sapiens}
Probab=81.51 E-value=6.5 Score=39.33 Aligned_cols=178 Identities=17% Similarity=0.107 Sum_probs=105.4
Q ss_pred CCChhHHHHHHHHHHHhhhc-c-hhhHHHhhhhHHHHHHHHhhccCchhHHhh----H-------HHHHHHH--HHhcHH
Q psy4703 153 SAPMDKRVTAVNNLVVLARE-M-SGAEMLLKSGVAKQINTLLKCETNEEIYLG----E-------EDFITSI--IKQGVD 217 (401)
Q Consensus 153 ~~~~~~~~~a~~~L~~l~~~-~-~gae~~~~e~~v~~L~~ll~~~~~~e~~lA----~-------e~fi~~i--~~~gv~ 217 (401)
..+.+.+..+...|..+... + .....+...|++..|.+++..+.++++... . ++--..| ...|++
T Consensus 254 s~~~~v~~~A~~aL~nLs~~~~~~~k~~I~~~GaI~~LV~lLl~s~~~~v~~~A~~aL~nLs~~~~~nk~~I~~~~Gal~ 333 (458)
T 3nmz_A 254 SESEDLQQVIASVLRNLSWRADVNSKKTLREVGSVKALMECALEVKKESTLKSVLSALWNLSAHCTENKADICAVDGALA 333 (458)
T ss_dssp CSCHHHHHHHHHHHHHHTSSCCHHHHHHHHHTTHHHHHHHHHTTCCSHHHHHHHHHHHHHHHHHCHHHHHHHHHSTTHHH
T ss_pred CCCHHHHHHHHHHHHHHhcCCCHHHHHHHHHcCCHHHHHHHHhcCCCHHHHHHHHHHHHHHccCCHHHHHHHHHhcCcHH
Confidence 44556666666665554432 2 233455456889999987541445555321 1 1111233 346799
Q ss_pred HHHHHHcCCCh----hHHHHHHHhhhhcccc-CCCCCCCCCCC-CCchHHHHHHHHhhhcCCCCCchhHHhHHhhhhhcc
Q psy4703 218 ILKRLYMSKNE----NIRVRALVGLCKLGSM-GGSDASIRPFA-DGSTRKLAEACRRFLVNPARDPDIRRWAAEGLAYLT 291 (401)
Q Consensus 218 ~Lk~l~~s~~d----~i~~ralvgLckl~~~-gg~d~~~~~~~-~~s~~~l~~~~~~~l~~~~~~~~~~~~~~eglay~~ 291 (401)
.|-+++.+.++ ++...|...|..+... .+.+.....+. .|-.-.|.+ +|. ..+.+.++.|+--|+-++
T Consensus 334 ~Lv~LL~~~~~~~~~~v~~~A~~aL~nLs~~~a~~~~~~~~i~~~G~i~~Lv~----LL~--~~~~~v~~~A~~aL~nLa 407 (458)
T 3nmz_A 334 FLVGTLTYRSQTNTLAIIESGGGILRNVSSLIATNEDHRQILRENNCLQTLLQ----HLK--SHSLTIVSNACGTLWNLS 407 (458)
T ss_dssp HHHHHTTCCCSSSTTHHHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHH----HSS--CSCHHHHHHHHHHHHHHH
T ss_pred HHHHHhcCCCCcchHHHHHHHHHHHHHHHhcccCCHHHHHHHHHcccHHHHHH----HHc--CCChHHHHHHHHHHHHHH
Confidence 99999986554 3665555555555431 01111111111 122222222 222 235678899999999888
Q ss_pred -CCHHHHHhhcCCHHHHHHHHHHHhcCCCCcchhhhhhhHHhhcccCCc
Q psy4703 292 -LDAEVKEALIEDKPALAALVDVASSVKYKNVWNGTQSDALKDVDKAFD 339 (401)
Q Consensus 292 -~~~~vke~~~~d~~~l~~l~~~~~~~~~~~~~~~~~~~~~~n~~~~~~ 339 (401)
-+++.+..++ +...+..|++++++. +..+.-..+ .++.||+..-|
T Consensus 408 ~~~~~~~~~i~-~~G~I~~Lv~LL~s~-~~~v~~~Aa-~AL~nL~~~~p 453 (458)
T 3nmz_A 408 ARNPKDQEALW-DMGAVSMLKNLIHSK-HKMIAMGSA-AALRNLMANRP 453 (458)
T ss_dssp SSCHHHHHHHH-HHTHHHHHHTTTTCS-SHHHHHHHH-HHHHHHHTCCS
T ss_pred cCCHHHHHHHH-HCCCHHHHHHHHhCC-CHHHHHHHH-HHHHHHHcCCH
Confidence 4899998876 467899999999877 666777777 89999997766
No 298
>2vkj_A TM1634; membrane protein, TPR motif joint center for structural GENO JCSG, structural genomics; 1.65A {Thermotoga maritima} PDB: 2vko_A*
Probab=80.19 E-value=6.1 Score=30.25 Aligned_cols=52 Identities=21% Similarity=0.317 Sum_probs=37.8
Q ss_pred hHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcCCCCcchHHHHHHHHHHHHH
Q psy4703 7 NDYNKLKESGNSAFKQGDYETALDFYTKALKVTAEESHERATCLKNRAAVYLK 59 (401)
Q Consensus 7 ~~a~~l~~~Gn~~~~~g~y~eAi~~y~~Al~l~~p~~~~~~~~~~n~a~~y~k 59 (401)
+.+..+...|..+++.++|.+|+.+|+++..+. .+......+-+.++.|--+
T Consensus 51 ~~~r~~i~eak~~y~~~ny~ea~~l~~k~~n~t-en~~i~ki~~fyl~ec~kk 102 (106)
T 2vkj_A 51 KKARSLIAEGKDLFETANYGEALVFFEKALNLS-DNEEIKKIASFYLEECRKK 102 (106)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-CCHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhcchhHHHHHHHHHHccc-cCHHHHHHHHHHHHHHHHH
Confidence 567888999999999999999999999998776 4422222333556666443
No 299
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=79.38 E-value=13 Score=32.27 Aligned_cols=50 Identities=16% Similarity=0.080 Sum_probs=39.9
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHhhcCCCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHH
Q psy4703 15 SGNSAFKQGDYETALDFYTKALKVTAEESHERATCLKNRAAVYLKQNQNDKVIEDCSKS 73 (401)
Q Consensus 15 ~Gn~~~~~g~y~eAi~~y~~Al~l~~p~~~~~~~~~~n~a~~y~klg~y~~Ai~~~~kA 73 (401)
+-..+...|+++.|.+.-. .++ ....|..+|...+..|+++-|..+|.++
T Consensus 11 rF~LAL~lg~l~~A~e~a~---~l~------~~~~Wk~Lg~~AL~~gn~~lAe~cy~~~ 60 (177)
T 3mkq_B 11 RFDLALEYGNLDAALDEAK---KLN------DSITWERLIQEALAQGNASLAEMIYQTQ 60 (177)
T ss_dssp HHHHHHHTTCHHHHHHHHH---HHC------CHHHHHHHHHHHHHTTCHHHHHHHHHHT
T ss_pred HHHHHHhcCCHHHHHHHHH---HhC------CHHHHHHHHHHHHHcCChHHHHHHHHHh
Confidence 3456678899999977644 345 6778999999999999999999988775
No 300
>3kae_A CDC27, possible protein of nuclear scaffold; tetratricopeptide repeat protein, protein binding; 2.30A {Encephalitozoon cuniculi}
Probab=78.47 E-value=16 Score=31.83 Aligned_cols=76 Identities=13% Similarity=0.015 Sum_probs=59.4
Q ss_pred hHHHHHHHHHHHHHHcCCHHHHHHHHHHHH--hhcC-CC----------Cc-chHHHHHHHHHHHHHcCCHHHHHHHHHH
Q psy4703 7 NDYNKLKESGNSAFKQGDYETALDFYTKAL--KVTA-EE----------SH-ERATCLKNRAAVYLKQNQNDKVIEDCSK 72 (401)
Q Consensus 7 ~~a~~l~~~Gn~~~~~g~y~eAi~~y~~Al--~l~~-p~----------~~-~~~~~~~n~a~~y~klg~y~~Ai~~~~k 72 (401)
+.+.+.+-+...+.+..+|..|+...+..+ ++++ |+ .+ +..-++..+|....+.|+-++|+.++..
T Consensus 60 NT~Ts~YYk~LCy~klKdYkkA~~~le~il~~kvd~d~~~d~~~~~ffvd~~DkEfFy~l~a~lltq~g~r~EaI~y~~~ 139 (242)
T 3kae_A 60 NTCTSKYYESLCYKKKKDYKKAIKSLESILEGKVERDPDVDARIQEMFVDPGDEEFFESLLGDLCTLSGYREEGIGHYVR 139 (242)
T ss_dssp CBHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCSBCCCCCCHHHHTTSCCTTCHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCcccccccceeeeccchHHHHHHHHHHHHHHhcCHHHhhhHhhh
Confidence 345667778889999999999999999998 3331 32 13 3444566679999999999999999999
Q ss_pred HHHhCCCCHH
Q psy4703 73 SLEIVPDDPK 82 (401)
Q Consensus 73 AL~ldP~~~k 82 (401)
....+|-.+.
T Consensus 140 Sf~~~~lf~~ 149 (242)
T 3kae_A 140 SFGKSFLFSP 149 (242)
T ss_dssp HHHHCCCHHH
T ss_pred hcCCccccch
Confidence 9999986543
No 301
>3l6x_A Catenin delta-1; catenin, armadillo, ARM, JMD, CE adhesion, complex, cell-CELL adhesion, ARVCF, delta-catenin DP120, JAC-1, cell membrane, membrane; 2.40A {Homo sapiens} PDB: 3l6y_A
Probab=76.36 E-value=14 Score=38.22 Aligned_cols=178 Identities=17% Similarity=0.101 Sum_probs=102.4
Q ss_pred ChhHHHHHHHHHHHhhhc-chhhHHHhhhhHHHHHHHHhhccCchhHHhh---------H---HHHHHHHH-HhcHHHHH
Q psy4703 155 PMDKRVTAVNNLVVLARE-MSGAEMLLKSGVAKQINTLLKCETNEEIYLG---------E---EDFITSII-KQGVDILK 220 (401)
Q Consensus 155 ~~~~~~~a~~~L~~l~~~-~~gae~~~~e~~v~~L~~ll~~~~~~e~~lA---------~---e~fi~~i~-~~gv~~Lk 220 (401)
+.+.+..++..|..+... +..-..+...|++..|..+++ +.++++... + ++.-..|. .+|++.|-
T Consensus 61 ~~~~q~~Aa~~L~~La~~~~~~k~~V~~~G~Ip~LV~LL~-s~~~~vq~~Aa~AL~nLa~~~~~~nk~~I~~~GaIp~LV 139 (584)
T 3l6x_A 61 LDAVKSNAAAYLQHLCYRNDKVKTDVRKLKGIPVLVGLLD-HPKKEVHLGACGALKNISFGRDQDNKIAIKNCDGVPALV 139 (584)
T ss_dssp CHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHGGG-CSSHHHHHHHHHHHHHHTSSSCHHHHHHHHHTTHHHHHH
T ss_pred CHHHHHHHHHHHHHHHcCChHHHHHHHHcCCcHHHHHHHC-CCCHHHHHHHHHHHHHHHccCCHHHHHHHHHcCCHHHHH
Confidence 344455555555444432 233345556778888888888 556665322 1 12223343 45699999
Q ss_pred HHHcC-CChhHHHHHHHhhhhccccCCCCCCCCCCCCCchHHHHHHHH----hhhc--------CCCCCchhHHhHHhhh
Q psy4703 221 RLYMS-KNENIRVRALVGLCKLGSMGGSDASIRPFADGSTRKLAEACR----RFLV--------NPARDPDIRRWAAEGL 287 (401)
Q Consensus 221 ~l~~s-~~d~i~~ralvgLckl~~~gg~d~~~~~~~~~s~~~l~~~~~----~~l~--------~~~~~~~~~~~~~egl 287 (401)
+++++ .+.+++..+...|..|.. .+.......+|..--|++... .|.. ....+.+.+..|+.-|
T Consensus 140 ~LL~s~~~~~~~e~aa~aL~nLS~---~~~~k~~I~~~alp~Lv~LL~~p~sg~~~~~~~~~k~~~~~d~~V~~nAa~~L 216 (584)
T 3l6x_A 140 RLLRKARDMDLTEVITGTLWNLSS---HDSIKMEIVDHALHALTDEVIIPHSGWEREPNEDCKPRHIEWESVLTNTAGCL 216 (584)
T ss_dssp HHHHHCCSHHHHHHHHHHHHHHTT---SGGGHHHHHHHTHHHHHHHTHHHHHCCC----------CCCCHHHHHHHHHHH
T ss_pred HHHcCCCCHHHHHHHHHHHHHHhC---CchhhHHHHhccHHHHHHHHhcccccccccccccccccccccHHHHHHHHHHH
Confidence 99985 566666665555555543 222221122222323343321 0100 1123568888999999
Q ss_pred hhccCC-HHHHHhhcCCHHHHHHHHHHHhcC-----CCCcchhhhhhhHHhhcccC
Q psy4703 288 AYLTLD-AEVKEALIEDKPALAALVDVASSV-----KYKNVWNGTQSDALKDVDKA 337 (401)
Q Consensus 288 ay~~~~-~~vke~~~~d~~~l~~l~~~~~~~-----~~~~~~~~~~~~~~~n~~~~ 337 (401)
.-+|.. ++.+..+++-.-.+..|+.++++. ++....=-.+ .+|.||+-.
T Consensus 217 ~NLs~~~~~~R~~i~~~~Gli~~LV~~L~~~~~~~~~~~~~~enav-~aL~NLs~~ 271 (584)
T 3l6x_A 217 RNVSSERSEARRKLRECDGLVDALIFIVQAEIGQKDSDSKLVENCV-CLLRNLSYQ 271 (584)
T ss_dssp HHHTSSCHHHHHHHHHSTTHHHHHHHHHHHHHHTTCCSCHHHHHHH-HHHHHHHTT
T ss_pred HHHhcCCHHHHHHHHHcCCcHHHHHHHHHHhhcccCccHHHHHHHH-HHHHHhhcc
Confidence 999976 566888887666777888887652 2333444456 789999843
No 302
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=76.31 E-value=22 Score=26.58 Aligned_cols=15 Identities=40% Similarity=0.341 Sum_probs=6.4
Q ss_pred HcCCHHHHHHHHHHH
Q psy4703 93 AIGKFEEAYTDAKHI 107 (401)
Q Consensus 93 ~lg~~eeA~~~~~ka 107 (401)
+.|+|++|+..|+.+
T Consensus 23 ~~g~y~eAl~lY~~a 37 (83)
T 2v6y_A 23 KEGKVEDAITYYKKA 37 (83)
T ss_dssp HTTCHHHHHHHHHHH
T ss_pred HhccHHHHHHHHHHH
Confidence 344444444444433
No 303
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=75.32 E-value=23 Score=26.47 Aligned_cols=15 Identities=40% Similarity=0.366 Sum_probs=6.4
Q ss_pred HcCCHHHHHHHHHHH
Q psy4703 93 AIGKFEEAYTDAKHI 107 (401)
Q Consensus 93 ~lg~~eeA~~~~~ka 107 (401)
+.|+|++|+..|+.+
T Consensus 31 ~~g~y~eAl~lY~~a 45 (83)
T 2w2u_A 31 KEGNAEEAITNYKKA 45 (83)
T ss_dssp HTTCHHHHHHHHHHH
T ss_pred HhccHHHHHHHHHHH
Confidence 444444444444433
No 304
>4b4t_P 26S proteasome regulatory subunit RPN5; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=75.31 E-value=25 Score=34.67 Aligned_cols=63 Identities=11% Similarity=0.099 Sum_probs=51.7
Q ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHH-h---CCC--CHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q psy4703 46 RATCLKNRAAVYLKQNQNDKVIEDCSKSLE-I---VPD--DPKALFRRCQAYEAIGKFEEAYTDAKHIH 108 (401)
Q Consensus 46 ~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~-l---dP~--~~kA~~~~a~a~~~lg~~eeA~~~~~kal 108 (401)
.+.+...+|..|...|+|.+|......... . ++. -...+....+.+...++|..|...++++.
T Consensus 136 rarl~~~La~i~e~~g~~~eA~~iL~~l~~Et~~~~~~~~kve~~l~q~rl~l~~~d~~~a~~~~~ki~ 204 (445)
T 4b4t_P 136 RARVTKDLVEIKKEEGKIDEAADILCELQVETYGSMEMSEKIQFILEQMELSILKGDYSQATVLSRKIL 204 (445)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCSSSCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 667778899999999999999999988753 2 211 14578888999999999999999999874
No 305
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=74.86 E-value=25 Score=28.13 Aligned_cols=17 Identities=29% Similarity=0.411 Sum_probs=7.9
Q ss_pred HcCCHHHHHHHHHHHHh
Q psy4703 93 AIGKFEEAYTDAKHIHR 109 (401)
Q Consensus 93 ~lg~~eeA~~~~~kal~ 109 (401)
..|+|++|+..|..+++
T Consensus 30 ~ag~y~eAl~lY~~Aie 46 (117)
T 2cpt_A 30 KAGNYEEALQLYQHAVQ 46 (117)
T ss_dssp HHTCHHHHHHHHHHHHH
T ss_pred HccCHHHHHHHHHHHHH
Confidence 34455555444444443
No 306
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=74.78 E-value=11 Score=37.20 Aligned_cols=65 Identities=11% Similarity=0.030 Sum_probs=55.0
Q ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC---CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Q psy4703 46 RATCLKNRAAVYLKQNQNDKVIEDCSKSLEIVP---DDPKALFRRCQAYEAIGKFEEAYTDAKHIHRV 110 (401)
Q Consensus 46 ~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~ldP---~~~kA~~~~a~a~~~lg~~eeA~~~~~kal~l 110 (401)
...++..+|.-|++.|++++|+..|.++..... .-...++..-+++...++|..+...++++-.+
T Consensus 130 ~~~~~~~la~~~~~~Gd~~~A~~~~~~~~~~~~~~~~kid~~l~~irl~l~~~d~~~~~~~~~ka~~~ 197 (429)
T 4b4t_R 130 QAQAWINLGEYYAQIGDKDNAEKTLGKSLSKAISTGAKIDVMLTIARLGFFYNDQLYVKEKLEAVNSM 197 (429)
T ss_dssp CSSCCHHHHHHHHHHCCCTTHHHHHHHHHHHHTCCCSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHh
Confidence 344677899999999999999999999887643 33678888899999999999999999998765
No 307
>2vgl_A Adaptor protein complex AP-2, alpha 2 subunit; cytoplasmic vesicle, alternative splicing, endocytosis, lipid-binding, golgi apparatus, adaptor, membrane, transport; HET: IHP; 2.59A {Rattus norvegicus} PDB: 2xa7_A 2jkr_A 2jkt_A
Probab=74.45 E-value=18 Score=37.46 Aligned_cols=160 Identities=14% Similarity=0.072 Sum_probs=99.2
Q ss_pred CCChhHHHHHHHHHHHh---hhcchhhHHHhhhhHHHHHHHHhhccCchh-HHhhHHHHH------HHHHHhcHHHHHHH
Q psy4703 153 SAPMDKRVTAVNNLVVL---AREMSGAEMLLKSGVAKQINTLLKCETNEE-IYLGEEDFI------TSIIKQGVDILKRL 222 (401)
Q Consensus 153 ~~~~~~~~~a~~~L~~l---~~~~~gae~~~~e~~v~~L~~ll~~~~~~e-~~lA~e~fi------~~i~~~gv~~Lk~l 222 (401)
+.+...+..++..++.. |.+ ...+...+.+++. +.+.+ .+++|-... ....--.+..|++=
T Consensus 49 ~~~~~~k~~~l~Kli~l~~~G~d--------~s~~~~~vvkl~~-s~~~~~Krl~YL~l~~~~~~~~e~~~L~iN~l~kD 119 (621)
T 2vgl_A 49 ALDGYSKKKYVCKLLFIFLLGHD--------IDFGHMEAVNLLS-SNRYTEKQIGYLFISVLVNSNSELIRLINNAIKND 119 (621)
T ss_dssp CCCHHHHHHHHHHHHHHHHHSCC--------CCSCHHHHHHGGG-CSCHHHHHHHHHHHHHSCCCCHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHcCCC--------CchhHHHHHHHhc-CCCHHHHHHHHHHHHHHccCCcHHHHHHHHHHHHh
Confidence 34566666666666543 332 1233444555665 44433 345552222 11111224455555
Q ss_pred HcCCChhHHHHHHHhhhhccccCCCCCCCCCCCCCchHHHHHHHHhhhcCCCCCchhHHhHHhhhhhcc-CCHHHHHhhc
Q psy4703 223 YMSKNENIRVRALVGLCKLGSMGGSDASIRPFADGSTRKLAEACRRFLVNPARDPDIRRWAAEGLAYLT-LDAEVKEALI 301 (401)
Q Consensus 223 ~~s~~d~i~~ralvgLckl~~~gg~d~~~~~~~~~s~~~l~~~~~~~l~~~~~~~~~~~~~~eglay~~-~~~~vke~~~ 301 (401)
+++.|+.++.-|+-.||.++.. .-...|...+++.|..+..++..|+-|+-++.-+- ++| +++
T Consensus 120 l~~~n~~ir~lALr~L~~i~~~------------e~~~~l~~~v~~~l~~~d~~~~VRK~A~~al~kl~~~~p----~~~ 183 (621)
T 2vgl_A 120 LASRNPTFMGLALHCIANVGSR------------EMAEAFAGEIPKILVAGDTMDSVKQSAALCLLRLYRTSP----DLV 183 (621)
T ss_dssp HHSCCHHHHHHHHHHHHHHCCH------------HHHHHHTTHHHHHHHCSSSCHHHHHHHHHHHHHHHHHCG----GGC
T ss_pred cCCCCHHHHHHHHHHhhccCCH------------HHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhCh----hhc
Confidence 6688899999999999988641 11234666677777545678899999999987654 444 445
Q ss_pred CCHHHHHHHHHHHhcCCCCcchhhhhhhHHhhcccCCc
Q psy4703 302 EDKPALAALVDVASSVKYKNVWNGTQSDALKDVDKAFD 339 (401)
Q Consensus 302 ~d~~~l~~l~~~~~~~~~~~~~~~~~~~~~~n~~~~~~ 339 (401)
.++.++..|.+++.+. +..|.++++ +.+..++..-|
T Consensus 184 ~~~~~~~~l~~lL~d~-d~~V~~~a~-~~l~~i~~~~~ 219 (621)
T 2vgl_A 184 PMGDWTSRVVHLLNDQ-HLGVVTAAT-SLITTLAQKNP 219 (621)
T ss_dssp CCCSCHHHHHHHTTCS-CHHHHHHHH-HHHHHHHHHCH
T ss_pred CchhHHHHHHHHhCCC-CccHHHHHH-HHHHHHHHhCh
Confidence 5567788888888766 778999998 88777765443
No 308
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=74.03 E-value=4.8 Score=30.34 Aligned_cols=30 Identities=33% Similarity=0.372 Sum_probs=17.5
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Q psy4703 9 YNKLKESGNSAFKQGDYETALDFYTKALKV 38 (401)
Q Consensus 9 a~~l~~~Gn~~~~~g~y~eAi~~y~~Al~l 38 (401)
+..+..+|...=+.|+|++|+.+|.++++.
T Consensus 19 Ai~lv~~Ave~D~~g~y~eAl~lY~~aie~ 48 (83)
T 2w2u_A 19 ARKYAINAVKADKEGNAEEAITNYKKAIEV 48 (83)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHH
Confidence 444555555556666666666666655554
No 309
>1te4_A Conserved protein MTH187; methanobacterium thermoautotrophicum, structural proteomics, heat-like repeat; NMR {Methanothermobacterthermautotrophicus} SCOP: a.118.1.16
Probab=73.88 E-value=1.9 Score=34.70 Aligned_cols=90 Identities=20% Similarity=0.191 Sum_probs=60.3
Q ss_pred hcHHHHHHHHcCCChhHHHHHHHhhhhccccCCCCCCCCCCCCCchHHHHHHHHhhhcCCCCCchhHHhHHhhhhhccCC
Q psy4703 214 QGVDILKRLYMSKNENIRVRALVGLCKLGSMGGSDASIRPFADGSTRKLAEACRRFLVNPARDPDIRRWAAEGLAYLTLD 293 (401)
Q Consensus 214 ~gv~~Lk~l~~s~~d~i~~ralvgLckl~~~gg~d~~~~~~~~~s~~~l~~~~~~~l~~~~~~~~~~~~~~eglay~~~~ 293 (401)
...+.|..++++.+..+|..|+..|+.++.. .. ....+.|. ..++..|.+|+..|+.+.
T Consensus 12 ~~~~~l~~~L~~~~~~vR~~A~~~L~~~~~~-------------~~----~~L~~~L~--d~~~~vR~~A~~aL~~~~-- 70 (131)
T 1te4_A 12 SGLVPRGSHMADENKWVRRDVSTALSRMGDE-------------AF----EPLLESLS--NEDWRIRGAAAWIIGNFQ-- 70 (131)
T ss_dssp ---------CCSSCCCSSSSCCSSTTSCSST-------------TH----HHHHHGGG--CSCHHHHHHHHHHHGGGC--
T ss_pred ccHHHHHHHhcCCCHHHHHHHHHHHHHhCch-------------HH----HHHHHHHc--CCCHHHHHHHHHHHHhcC--
Confidence 3466777788888888888888888766521 11 33334554 357889999999999874
Q ss_pred HHHHHhhcCCHHHHHHHHHHHhcCCCCcchhhhhhhHHhhcc
Q psy4703 294 AEVKEALIEDKPALAALVDVASSVKYKNVWNGTQSDALKDVD 335 (401)
Q Consensus 294 ~~vke~~~~d~~~l~~l~~~~~~~~~~~~~~~~~~~~~~n~~ 335 (401)
|+.++..|++.+++. +..|-..++ ..+.++.
T Consensus 71 ---------~~~a~~~L~~~L~d~-~~~VR~~A~-~aL~~~~ 101 (131)
T 1te4_A 71 ---------DERAVEPLIKLLEDD-SGFVRSGAA-RSLEQIG 101 (131)
T ss_dssp ---------SHHHHHHHHHHHHHC-CTHHHHHHH-HHHHHHC
T ss_pred ---------CHHHHHHHHHHHcCC-CHHHHHHHH-HHHHHhC
Confidence 567788889988876 778888888 8887775
No 310
>3ax2_A Mitochondrial import receptor subunit TOM20 homol; protein-protein complex, membrane protein-transport protein; 1.90A {Rattus norvegicus} PDB: 2v1s_A 3awr_A 2v1t_A 3ax5_A 3ax3_A
Probab=71.96 E-value=6.4 Score=29.01 Aligned_cols=29 Identities=34% Similarity=0.574 Sum_probs=26.5
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHhhcCCC
Q psy4703 13 KESGNSAFKQGDYETALDFYTKALKVTAEE 42 (401)
Q Consensus 13 ~~~Gn~~~~~g~y~eAi~~y~~Al~l~~p~ 42 (401)
...|..++..|++++|+.+|.+|+..+ |.
T Consensus 21 V~~GE~L~~~g~~~~~~~hf~nAl~Vc-~q 49 (73)
T 3ax2_A 21 IQLGEELLAQGDYEKGVDHLTNAIAVC-GQ 49 (73)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTC-SS
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHc-CC
Confidence 467999999999999999999999999 75
No 311
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=71.93 E-value=5.8 Score=29.84 Aligned_cols=31 Identities=32% Similarity=0.379 Sum_probs=16.5
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Q psy4703 8 DYNKLKESGNSAFKQGDYETALDFYTKALKV 38 (401)
Q Consensus 8 ~a~~l~~~Gn~~~~~g~y~eAi~~y~~Al~l 38 (401)
.+..+..+|...=+.|+|++|+.+|.++|+.
T Consensus 10 ~Ai~lv~~Ave~D~~g~y~eAl~lY~~aie~ 40 (83)
T 2v6y_A 10 MARKYAILAVKADKEGKVEDAITYYKKAIEV 40 (83)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHHHHHHHH
Confidence 3444455555555555555555555555543
No 312
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=70.36 E-value=6.5 Score=30.28 Aligned_cols=28 Identities=29% Similarity=0.344 Sum_probs=20.3
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q psy4703 81 PKALFRRCQAYEAIGKFEEAYTDAKHIH 108 (401)
Q Consensus 81 ~kA~~~~a~a~~~lg~~eeA~~~~~kal 108 (401)
+..+-|++..+.+.|+|++||.+.+++.
T Consensus 15 AH~~~RrAe~ll~~gkydeAIech~kAa 42 (97)
T 2crb_A 15 AHQQSRRADRLLAAGKYEEAISCHRKAT 42 (97)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred hhHhhhHHHHHHhcCCHHHHHHHHHHHH
Confidence 4456677888888888888877766655
No 313
>4ady_A RPN2, 26S proteasome regulatory subunit RPN2; protein binding, PC repeat; 2.70A {Saccharomyces cerevisiae} PDB: 4b4t_N
Probab=69.72 E-value=68 Score=35.07 Aligned_cols=51 Identities=12% Similarity=0.029 Sum_probs=29.7
Q ss_pred HcCCHHHHHHHHHHHHHhC-CCC----HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhC
Q psy4703 59 KQNQNDKVIEDCSKSLEIV-PDD----PKALFRRCQAYEAIGKFEEAYTDAKHIHRVE 111 (401)
Q Consensus 59 klg~y~~Ai~~~~kAL~ld-P~~----~kA~~~~a~a~~~lg~~eeA~~~~~kal~l~ 111 (401)
..|+.++++....+-|--. .++ ..|++.+|.++...+ ++++..+...+.-+
T Consensus 386 h~g~~~~gl~~L~~yL~~~~s~~~~ik~GAllaLGli~ag~~--~~~~~lL~~~L~~~ 441 (963)
T 4ady_A 386 HKGNLLEGKKVMAPYLPGSRASSRFIKGGSLYGLGLIYAGFG--RDTTDYLKNIIVEN 441 (963)
T ss_dssp TSSCTTTHHHHHTTTSTTSCCSCHHHHHHHHHHHHHHTTTTT--HHHHHHHHHHHHHH
T ss_pred ccCchHHHHHHHHHhccccCCCcHHHHHHHHHHHHHhcCCCc--HHHHHHHHHHHcCc
Confidence 3566666766666555421 112 345666776666555 46777777776543
No 314
>1qsa_A Protein (soluble lytic transglycosylase SLT70); alpha-superhelix, transferase; HET: GOL; 1.65A {Escherichia coli} SCOP: a.118.5.1 d.2.1.6 PDB: 1qte_A* 1sly_A*
Probab=68.60 E-value=15 Score=38.07 Aligned_cols=54 Identities=7% Similarity=-0.023 Sum_probs=40.0
Q ss_pred HHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHh
Q psy4703 56 VYLKQNQNDKVIEDCSKSLEIVPDDPKALFRRCQAYEAIGKFEEAYTDAKHIHR 109 (401)
Q Consensus 56 ~y~klg~y~~Ai~~~~kAL~ldP~~~kA~~~~a~a~~~lg~~eeA~~~~~kal~ 109 (401)
..++.++++.|...+...-.-.+....+.|.+|.++..+|+-++|...|+++..
T Consensus 294 ~Alr~~d~~~a~~~~~~l~~~~~~~~r~~YW~~ra~~~~g~~~~a~~~~~~~a~ 347 (618)
T 1qsa_A 294 MALGTGDRRGLNTWLARLPMEAKEKDEWRYWQADLLLERGREAEAKEILHQLMQ 347 (618)
T ss_dssp HHHHHTCHHHHHHHHHHSCTTGGGSHHHHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred HHHHCCCHHHHHHHHHHccccccccHhHHHHHHHHHHHcCCHHHHHHHHHHHhc
Confidence 345668888888887665443335677788888888888888888888887764
No 315
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=68.16 E-value=37 Score=25.82 Aligned_cols=16 Identities=13% Similarity=0.075 Sum_probs=6.7
Q ss_pred HcCCHHHHHHHHHHHH
Q psy4703 93 AIGKFEEAYTDAKHIH 108 (401)
Q Consensus 93 ~lg~~eeA~~~~~kal 108 (401)
..|+|++|+..|..++
T Consensus 27 ~~g~y~eAl~~Y~~Ai 42 (93)
T 1wfd_A 27 AESRYQQALVCYQEGI 42 (93)
T ss_dssp HTTCHHHHHHHHHHHH
T ss_pred HhCCHHHHHHHHHHHH
Confidence 3344444444444433
No 316
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=68.15 E-value=7.1 Score=29.59 Aligned_cols=30 Identities=13% Similarity=0.197 Sum_probs=19.7
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Q psy4703 9 YNKLKESGNSAFKQGDYETALDFYTKALKV 38 (401)
Q Consensus 9 a~~l~~~Gn~~~~~g~y~eAi~~y~~Al~l 38 (401)
+..+..+|..+-..|+|++|+.+|.++++.
T Consensus 16 A~~lv~~Ave~D~~g~y~eAl~lY~~Aie~ 45 (86)
T 4a5x_A 16 AATVLKRAVELDSESRYPQALVCYQEGIDL 45 (86)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 445556666666777777777777766654
No 317
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=67.97 E-value=16 Score=40.78 Aligned_cols=91 Identities=10% Similarity=0.036 Sum_probs=65.8
Q ss_pred HHHHHHcCCHHHHHHHHHHHHhhcCCCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHH---h----------------
Q psy4703 16 GNSAFKQGDYETALDFYTKALKVTAEESHERATCLKNRAAVYLKQNQNDKVIEDCSKSLE---I---------------- 76 (401)
Q Consensus 16 Gn~~~~~g~y~eAi~~y~~Al~l~~p~~~~~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~---l---------------- 76 (401)
...++..|.++-|.+ .+... |. ++...+.+|.+|+..|++++|..+|.+|-. .
T Consensus 819 ~~~l~~~~~~~~~~~----l~~~~-~~---~~~~~yl~g~~~L~~ge~~~A~~~F~kaa~~~~~~~~l~~~~~~~~~~~~ 890 (1139)
T 4fhn_B 819 VEKLFLFKQYNACMQ----LIGWL-NS---DPIAVYLKALIYLKSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAE 890 (1139)
T ss_dssp HHHHHHHSCTTHHHH----HHHHS-CC---CHHHHHHHHHHHHHTTCHHHHHHHHHTCCCSCTTCCCSCSSHHHHHHHHH
T ss_pred HHHHHHhhhHHHHHH----Hhhhc-cC---CcHHHHHHHHHHHhcCCHHHHHHHHHHHhhhhcccchhhhhhcccccccc
Confidence 344566666665543 33445 44 444568899999999999999999987621 1
Q ss_pred ----CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC
Q psy4703 77 ----VPDDPKALFRRCQAYEAIGKFEEAYTDAKHIHRVEPTN 114 (401)
Q Consensus 77 ----dP~~~kA~~~~a~a~~~lg~~eeA~~~~~kal~l~P~~ 114 (401)
....+..|+.....+.+.+.++.+++..+.|++..+.+
T Consensus 891 ~~~~~~~l~~YY~hv~~LFe~~~~~~~vi~fa~lAi~~~~~~ 932 (1139)
T 4fhn_B 891 KYHHQNLLSCYYLHLSKKLFEESAYIDALEFSLLADASKETD 932 (1139)
T ss_dssp TTTSCCSSHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHCCSC
T ss_pred cccccccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhccCC
Confidence 11234567788889999999999999999999876544
No 318
>3b2a_A TON_1937, putative uncharacterized protein; heat-repeats, hypothetical, unknown function; 2.20A {Thermococcus onnurineus}
Probab=67.70 E-value=74 Score=29.04 Aligned_cols=204 Identities=19% Similarity=0.152 Sum_probs=117.3
Q ss_pred HHHHHHHhhhcchhhHHHhh-hhHHHHHHHHhhccCchhHHhh----HHHHH--------HHHHHhcHHHHHHHHcCCCh
Q psy4703 162 AVNNLVVLAREMSGAEMLLK-SGVAKQINTLLKCETNEEIYLG----EEDFI--------TSIIKQGVDILKRLYMSKNE 228 (401)
Q Consensus 162 a~~~L~~l~~~~~gae~~~~-e~~v~~L~~ll~~~~~~e~~lA----~e~fi--------~~i~~~gv~~Lk~l~~s~~d 228 (401)
..+..+..|+-....+.... +..+..+..++. ++|+.+... .++.+ +-+.++.++-+=.+.+++|+
T Consensus 11 ~lre~L~sWkiK~a~ela~~~e~~l~~L~~LL~-dkD~~vk~raL~~LeellK~~~~~l~~~~~e~~Ld~iI~llk~~dE 89 (265)
T 3b2a_A 11 ELRELVLSWQILDAVSLALEDKRALFLILELAG-EDDETTRLRAFVALGEILKRADSDLRMMVLERHLDVFINALSQENE 89 (265)
T ss_dssp HHHHHHHTTCHHHHHHHHHHCHHHHHHHHHHTT-SSCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTCCSTTH
T ss_pred HHHHHHHHhhHHHHHHHHHhchhHHHHHHHHHh-ccchHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHhccch
Confidence 34455666665555433332 345777777776 667776443 24444 33466677777777789999
Q ss_pred hHHHHHHHhhhhccccCCCCCCCCCCCCCchHHHHHHHHhhhcCCCCCchhHHhHHhhhhhcc---CCHHHHHhhc----
Q psy4703 229 NIRVRALVGLCKLGSMGGSDASIRPFADGSTRKLAEACRRFLVNPARDPDIRRWAAEGLAYLT---LDAEVKEALI---- 301 (401)
Q Consensus 229 ~i~~ralvgLckl~~~gg~d~~~~~~~~~s~~~l~~~~~~~l~~~~~~~~~~~~~~eglay~~---~~~~vke~~~---- 301 (401)
.+.++|+=.|..+=.. . +..+++-.++.++....+. +.++=.+-.|+|+|.-+. +.+.|-..|.
T Consensus 90 kval~A~r~L~~LLe~--v-----pL~~~~y~Kl~~aL~dlik--~~~~il~~eaae~Lgklkv~~~~~~V~~~l~sLl~ 160 (265)
T 3b2a_A 90 KVTIKALRALGYLVKD--V-----PMGSKTFLKAAKTLVSLLE--SPDDMMRIETIDVLSKLQPLEDSKLVRTYINELVV 160 (265)
T ss_dssp HHHHHHHHHHHHHHTT--C-----CBCHHHHHHHHHHHHHHTT--SCCHHHHHHHHHHHHHCCBSCCCHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHHHHcC--C-----CCCHHHHHHHHHHHHHHhc--CCCchHHHHHHHHhCcCCcccchHHHHHHHHHHHh
Confidence 9999888777766642 2 3334666788888887775 334445667888776553 2333333221
Q ss_pred -CC----HHHHHHHHHHHhcCCCCcchhhhhhhHHhhcccCCcHHHHHHHhhHhhhhhhhhccCCCccchHHHHHH-HHH
Q psy4703 302 -ED----KPALAALVDVASSVKYKNVWNGTQSDALKDVDKAFDEFMEEVAKLEKEEAEMLETLYQDEKELADFYSL-LST 375 (401)
Q Consensus 302 -~d----~~~l~~l~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~-~~~ 375 (401)
.| ...|++|.+++..+.|+.++=.++ +=+.-+-++-+|.+.+.+=.+=..+-. .+-.++-+|+-.-|.. ++.
T Consensus 161 Skd~~vK~agl~~L~eia~~S~D~~i~~~I~-~eI~elL~~eD~~l~e~aLd~Le~ils-~pi~~~~~~~~~~~~~~v~~ 238 (265)
T 3b2a_A 161 SPDLYTKVAGFCLFLNMLNSSADSGHLTLIL-DEIPSLLQNDNEFIVELALDVLEKALS-FPLLENVKIELLKISRIVDG 238 (265)
T ss_dssp CSSHHHHHHHHHHHHHHGGGCSSCCCGGGTT-TTHHHHHTCSCHHHHHHHHHHHHHHTT-SCCCSCCHHHHHHHHHHHHH
T ss_pred CCChhHHHHHHHHHHHhhcccCCHHHHHHHH-HHHHHHHcCCCHHHHHHHHHHHHHHHc-CcccHhHHHHHHHHHHHHHH
Confidence 11 345666777766554666655444 333333333347777666554443210 1113466777666666 666
Q ss_pred HH
Q psy4703 376 LV 377 (401)
Q Consensus 376 ~~ 377 (401)
|+
T Consensus 239 l~ 240 (265)
T 3b2a_A 239 LV 240 (265)
T ss_dssp GG
T ss_pred HH
Confidence 55
No 319
>2cug_A Mkiaa0962 protein; DNAJ-like domain, structural genomics, molecular chaperone, NPPSFA; NMR {Mus musculus}
Probab=66.77 E-value=15 Score=27.49 Aligned_cols=57 Identities=18% Similarity=0.086 Sum_probs=39.1
Q ss_pred HHHHHhhc-CCCChhHHHHHHHHHHHhhhcch----hhHHHhhhhHHHHHHHHhhccCchhHHhhHH
Q psy4703 144 NMFKYVFD-TSAPMDKRVTAVNNLVVLAREMS----GAEMLLKSGVAKQINTLLKCETNEEIYLGEE 205 (401)
Q Consensus 144 ~~~~~~~~-~~~~~~~~~~a~~~L~~l~~~~~----gae~~~~e~~v~~L~~ll~~~~~~e~~lA~e 205 (401)
++|+++.. ...+.+.+..+++.+....|+|. +++..|.. +....+++. ++.....|+
T Consensus 18 d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~~~f~~--i~~Ay~~L~---d~~~R~~YD 79 (88)
T 2cug_A 18 DPYRVLGVSRTASQADIKKAYKKLAREWHPDKNKDPGAEDRFIQ--ISKAYEILS---NEEKRTNYD 79 (88)
T ss_dssp CHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCCSTTHHHHHHH--HHHHHHHHH---SHHHHHHHH
T ss_pred CHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCChhHHHHHHH--HHHHHHHHC---CHHHHHHHH
Confidence 46777776 56778889999999999999975 34455444 556666665 565544443
No 320
>2v6x_A Vacuolar protein sorting-associated protein 4; protein transport, vacuole, endosome, transport, ESCRT-III, VPS2, VPS4, SKD1, VPS4B, VPS4A; 1.98A {Saccharomyces cerevisiae}
Probab=66.37 E-value=8.7 Score=28.79 Aligned_cols=31 Identities=19% Similarity=0.144 Sum_probs=18.3
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Q psy4703 8 DYNKLKESGNSAFKQGDYETALDFYTKALKV 38 (401)
Q Consensus 8 ~a~~l~~~Gn~~~~~g~y~eAi~~y~~Al~l 38 (401)
.+..+..+|...=..|+|++|+.+|..+++.
T Consensus 12 ~A~~l~~~Av~~D~~g~y~eAl~~Y~~aie~ 42 (85)
T 2v6x_A 12 KGIELVQKAIDLDTATQYEEAYTAYYNGLDY 42 (85)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 3445555565555666666666666665554
No 321
>3mkr_B Coatomer subunit alpha; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=66.01 E-value=33 Score=32.51 Aligned_cols=107 Identities=17% Similarity=0.246 Sum_probs=64.1
Q ss_pred hhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcCC----C-CcchHHH--HHHHHHHHH-----HcCCHHH---HHHHH
Q psy4703 6 MNDYNKLKESGNSAFKQGDYETALDFYTKALKVTAE----E-SHERATC--LKNRAAVYL-----KQNQNDK---VIEDC 70 (401)
Q Consensus 6 p~~a~~l~~~Gn~~~~~g~y~eAi~~y~~Al~l~~p----~-~~~~~~~--~~n~a~~y~-----klg~y~~---Ai~~~ 70 (401)
..........|..++..|++++|+..|+.+|... | + ..+...+ +..++.-|. ++.+-+- ..++-
T Consensus 99 l~~l~~~Lk~gyk~~t~gKf~eAl~~Fr~iL~~i-~l~~v~~~~e~~e~~eli~icreYilal~iEl~Rr~l~~~~~~~~ 177 (320)
T 3mkr_B 99 LNDLIQRLQLCYQLTTVGKFEEAVEKFRSILLSV-PLLVVDNKQEIAEAQQLITICREYIVGLSMETERKKLPKETLEQQ 177 (320)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHG-GGCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCSHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHh-hheeeccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCchhH
Confidence 3445566788999999999999999999999877 4 1 1111122 222333332 1111000 01222
Q ss_pred HHHHHh---------CCCCHHHHHHHHHH-HHHcCCHHHHHHHHHHHHhhCCC
Q psy4703 71 SKSLEI---------VPDDPKALFRRCQA-YEAIGKFEEAYTDAKHIHRVEPT 113 (401)
Q Consensus 71 ~kAL~l---------dP~~~kA~~~~a~a-~~~lg~~eeA~~~~~kal~l~P~ 113 (401)
.+.+++ .|.|-..-++.|.. .++.++|--|....++.+++.|+
T Consensus 178 kR~lELAAYFT~c~Lqp~H~~LaLr~AM~~a~K~KNy~tAa~fArrLLel~p~ 230 (320)
T 3mkr_B 178 KRICEMAAYFTHSNLQPVHMILVLRTALNLFFKLKNFRTAAAFARRLLELGPK 230 (320)
T ss_dssp HHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHTTBHHHHHHHHHHHHHTCCC
T ss_pred HHHHHHHHHhccCCCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCC
Confidence 333333 44444333444433 47999999999999999999886
No 322
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=65.75 E-value=8.9 Score=29.44 Aligned_cols=29 Identities=14% Similarity=0.175 Sum_probs=13.7
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHh
Q psy4703 9 YNKLKESGNSAFKQGDYETALDFYTKALK 37 (401)
Q Consensus 9 a~~l~~~Gn~~~~~g~y~eAi~~y~~Al~ 37 (401)
+..+..+|...=..|+|++|+.+|..+++
T Consensus 15 Ai~lv~~Ave~D~~g~y~eAl~~Y~~Aie 43 (93)
T 1wfd_A 15 AVAVLKRAVELDAESRYQQALVCYQEGID 43 (93)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 33344444444445555555555444443
No 323
>3lpz_A GET4 (YOR164C homolog); protein targeting, tail-anchored protein biogenesis, GET PAT GET5 binding, protein transport; 1.98A {Chaetomium thermophilum}
Probab=64.02 E-value=49 Score=31.54 Aligned_cols=96 Identities=15% Similarity=0.111 Sum_probs=53.1
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHH-HhhcCCC--------------------CcchHHHHHHHHHHHHHcCC-----
Q psy4703 9 YNKLKESGNSAFKQGDYETALDFYTKA-LKVTAEE--------------------SHERATCLKNRAAVYLKQNQ----- 62 (401)
Q Consensus 9 a~~l~~~Gn~~~~~g~y~eAi~~y~~A-l~l~~p~--------------------~~~~~~~~~n~a~~y~klg~----- 62 (401)
-+.++...+.|.++++|++|++..... ..+..-. .+.+......+..++.....
T Consensus 35 HQ~~RTi~~Ry~~~k~y~eAidLL~~GA~~ll~~~Q~~sg~DL~~llvevy~~~~~~~~~~~~~rL~~L~~~~~~~~p~r 114 (336)
T 3lpz_A 35 AQETRLVAARYSKQGNWAAAVDILASVSQTLLRSGQGGSGGDLAVLLVDTFRQAGQRVDGASRGKLLGCLRLFQPGEPVR 114 (336)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHTTSCTTCHHH
T ss_pred HHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHCCCcchHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHhCCCCCcHH
Confidence 356677888899999999999875432 2221000 00111222222222222221
Q ss_pred ---HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHH
Q psy4703 63 ---NDKVIEDCSKSLEIVPDDPKALFRRCQAYEAIGKFEEAYTDA 104 (401)
Q Consensus 63 ---y~~Ai~~~~kAL~ldP~~~kA~~~~a~a~~~lg~~eeA~~~~ 104 (401)
..+|+.+..+.=...-.++..|...|..|.+.++|.+|..+|
T Consensus 115 ~~fi~~ai~WS~~~g~~~~Gdp~LH~~ig~~~~~e~~~~~Ae~H~ 159 (336)
T 3lpz_A 115 KRFVKEMIDWSKKFGDYPAGDPELHHVVGTLYVEEGEFEAAEKHL 159 (336)
T ss_dssp HHHHHHHHHHHHHHSSCTTCCHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHccCCHHHHHHHH
Confidence 122333333311122367888888899999999999988887
No 324
>3mv2_A Coatomer subunit alpha; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_A
Probab=63.81 E-value=30 Score=32.81 Aligned_cols=106 Identities=13% Similarity=0.134 Sum_probs=62.2
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcCC-----CCcchHHH--HHHHHHHHHHcCCHHHHH-----HHHHHHHH
Q psy4703 8 DYNKLKESGNSAFKQGDYETALDFYTKALKVTAE-----ESHERATC--LKNRAAVYLKQNQNDKVI-----EDCSKSLE 75 (401)
Q Consensus 8 ~a~~l~~~Gn~~~~~g~y~eAi~~y~~Al~l~~p-----~~~~~~~~--~~n~a~~y~klg~y~~Ai-----~~~~kAL~ 75 (401)
........|..++..|++++|+..|+.+|... | +..+...+ +..+|.-|.--=..+-+. ++-.+.++
T Consensus 113 ~L~~~Lk~gyk~~t~gKf~eAl~~Fr~iL~~i-~l~~v~~~~e~~e~~eli~icrEYilal~iEl~Rr~l~~~~~kR~lE 191 (325)
T 3mv2_A 113 VVNEKMNEGYKNFKLNKPDIAIECFREAIYRI-TLLMVDDAEDEKLAHKILETAREYILGLSIELERRSLKEGNTVRMLE 191 (325)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH-HTCCBCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCTTCHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHh-heeeeccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccHHHHHH
Confidence 34455678999999999999999999998875 3 11122222 333333332110001000 11122222
Q ss_pred h---------CCCCHHHHHHHHH-HHHHcCCHHHHHHHHHHHHhhCCCC
Q psy4703 76 I---------VPDDPKALFRRCQ-AYEAIGKFEEAYTDAKHIHRVEPTN 114 (401)
Q Consensus 76 l---------dP~~~kA~~~~a~-a~~~lg~~eeA~~~~~kal~l~P~~ 114 (401)
+ .|.+-..-.+.|. ..++.++|--|....++.+++.|+.
T Consensus 192 LAAYFT~c~LQp~H~~LaLr~AM~~a~K~KNy~tAa~fArrLLel~p~~ 240 (325)
T 3mv2_A 192 LAAYFTKAKLSPIHRTNALQVAMSQHFKHKNFLQASYFAGEFLKIISSG 240 (325)
T ss_dssp HHHHGGGSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSS
T ss_pred HHHHhccCCCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCH
Confidence 2 3433333333443 3479999999999999999999963
No 325
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=63.43 E-value=32 Score=37.50 Aligned_cols=94 Identities=9% Similarity=0.063 Sum_probs=67.8
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHhhcCCCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHH-HhC----------------
Q psy4703 15 SGNSAFKQGDYETALDFYTKALKVTAEESHERATCLKNRAAVYLKQNQNDKVIEDCSKSL-EIV---------------- 77 (401)
Q Consensus 15 ~Gn~~~~~g~y~eAi~~y~~Al~l~~p~~~~~~~~~~n~a~~y~klg~y~~Ai~~~~kAL-~ld---------------- 77 (401)
....+...|.++-|. +.+... |. ++..-|-+|.+|+..|++++|..+|.+|- .+.
T Consensus 816 l~~~L~~~~~~~~a~----eL~~~~-~~---t~~~~yv~gr~~L~~ge~~~A~~~F~kAA~gl~~~~~~~~~~~~~~~ll 887 (950)
T 4gq2_M 816 LVEKLFLFKQYNACM----QLIGWL-NS---DPIAVYLKALIYLKSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIA 887 (950)
T ss_dssp HHHHHHHTTCHHHHH----HHGGGC-CS---SHHHHHHHHHHHHHTTCHHHHHHHHHTCCCTTCSSCCSCGGGHHHHHHH
T ss_pred HHHHHHHhcHHHHHH----HHHhhc-CC---ChHHHHHHHHHHHHcCCHHHHHHHHHHHhhhcccCcccccchhhhhhcc
Confidence 455667777776543 345566 54 44455779999999999999999998753 111
Q ss_pred ----CC--CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhC-CCCcc
Q psy4703 78 ----PD--DPKALFRRCQAYEAIGKFEEAYTDAKHIHRVE-PTNKA 116 (401)
Q Consensus 78 ----P~--~~kA~~~~a~a~~~lg~~eeA~~~~~kal~l~-P~~~~ 116 (401)
+. ....|......+...+-|+-++...+.|++.- ++++.
T Consensus 888 ~~~e~~~~~~~YY~hV~~LFE~~~a~~~vi~fA~lAI~~~~~dd~~ 933 (950)
T 4gq2_M 888 EKYHHQNLLSCYYLHLSKKLFEESAYIDALEFSLLADASKETDDED 933 (950)
T ss_dssp HHTTTCSHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCSCCHH
T ss_pred CcccccchhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcccCCcc
Confidence 11 13467788999999999999999999999754 44444
No 326
>2ctp_A DNAJ homolog subfamily B member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=63.41 E-value=16 Score=26.63 Aligned_cols=56 Identities=16% Similarity=0.079 Sum_probs=37.6
Q ss_pred HHHHHhhc-CCCChhHHHHHHHHHHHhhhcch----hhHHHhhhhHHHHHHHHhhccCchhHHhhH
Q psy4703 144 NMFKYVFD-TSAPMDKRVTAVNNLVVLAREMS----GAEMLLKSGVAKQINTLLKCETNEEIYLGE 204 (401)
Q Consensus 144 ~~~~~~~~-~~~~~~~~~~a~~~L~~l~~~~~----gae~~~~e~~v~~L~~ll~~~~~~e~~lA~ 204 (401)
++|+++.. ...+.+.+..+++.+....|++. +++..|.. +....+++. ++.....|
T Consensus 8 ~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~~~f~~--i~~Ay~~L~---d~~~R~~Y 68 (78)
T 2ctp_A 8 DYYEILGVSRGASDEDLKKAYRRLALKFHPDKNHAPGATEAFKA--IGTAYAVLS---NPEKRKQY 68 (78)
T ss_dssp CHHHHHTCCTTCCHHHHHHHHHHHHTTSCTTTCSSHHHHHHHHH--HHHHHHHHT---SHHHHHHH
T ss_pred CHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHH--HHHHHHHHC---CHHHHHHH
Confidence 46777776 55677889999999999999975 34444444 555555555 56553333
No 327
>1w63_A Adapter-related protein complex 1 gamma 1 subunit; endocytosis, clathrin adaptor, transport, coated PITS; 4.0A {Mus musculus} SCOP: i.23.1.1
Probab=63.14 E-value=47 Score=34.07 Aligned_cols=119 Identities=17% Similarity=0.100 Sum_probs=71.1
Q ss_pred hhHHHHHHHHHHH---hhhcchhhHHHhhhhHHHHHHHHhhccCc-hhHHhhHHHHH------HHHHHhcHHHHHHHHcC
Q psy4703 156 MDKRVTAVNNLVV---LAREMSGAEMLLKSGVAKQINTLLKCETN-EEIYLGEEDFI------TSIIKQGVDILKRLYMS 225 (401)
Q Consensus 156 ~~~~~~a~~~L~~---l~~~~~gae~~~~e~~v~~L~~ll~~~~~-~e~~lA~e~fi------~~i~~~gv~~Lk~l~~s 225 (401)
...|..++..++. +|.. ...+...+.+++. +.+ +...++|-... ....--.+.-|.+-+++
T Consensus 48 ~~~k~~~l~kli~~~~~G~d--------~~~~~~~vik~~~-s~~~~~Krl~Yl~~~~~~~~~~e~~~l~in~l~kDL~~ 118 (618)
T 1w63_A 48 NTYRCRNVAKLLYMHMLGYP--------AHFGQLECLKLIA-SQKFTDKRIGYLGAMLLLDERQDVHLLMTNCIKNDLNH 118 (618)
T ss_dssp TTTHHHHHHHHHHHHHTTCC--------CGGGHHHHHHHHH-SSSHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHHHHcCCC--------CcchHHHHHHHHc-CCchHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHhcCC
Confidence 3445555666554 4442 1223444555555 433 33456663222 11122345566667788
Q ss_pred CChhHHHHHHHhhhhccccCCCCCCCCCCCCCchHHHHHHHHhhhcCCCCCchhHHhHHhhhhhcc-CCHHHH
Q psy4703 226 KNENIRVRALVGLCKLGSMGGSDASIRPFADGSTRKLAEACRRFLVNPARDPDIRRWAAEGLAYLT-LDAEVK 297 (401)
Q Consensus 226 ~~d~i~~ralvgLckl~~~gg~d~~~~~~~~~s~~~l~~~~~~~l~~~~~~~~~~~~~~eglay~~-~~~~vk 297 (401)
.|+.++..|+-.||.++.. .-...|.....++|.. .++..|+.|+..|.-+. ..|+.-
T Consensus 119 ~n~~vr~lAL~~L~~i~~~------------~~~~~l~~~l~~~L~~--~~~~VRk~A~~al~~l~~~~p~~v 177 (618)
T 1w63_A 119 STQFVQGLALCTLGCMGSS------------EMCRDLAGEVEKLLKT--SNSYLRKKAALCAVHVIRKVPELM 177 (618)
T ss_dssp SSSHHHHHHHHHHHHHCCH------------HHHHHHHHHHHHHHHS--CCHHHHHHHHHHHHHHHHHCGGGG
T ss_pred CCHhHHHHHHHHHHhcCCH------------HHHHHHHHHHHHHHcC--CCHHHHHHHHHHHHHHHHHChHHH
Confidence 9999999999999998832 1123567777888864 46889999999998664 345443
No 328
>3ax2_A Mitochondrial import receptor subunit TOM20 homol; protein-protein complex, membrane protein-transport protein; 1.90A {Rattus norvegicus} PDB: 2v1s_A 3awr_A 2v1t_A 3ax5_A 3ax3_A
Probab=62.14 E-value=18 Score=26.60 Aligned_cols=37 Identities=16% Similarity=0.170 Sum_probs=28.9
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHhhCCCCccHHHHH
Q psy4703 85 FRRCQAYEAIGKFEEAYTDAKHIHRVEPTNKAIQPVL 121 (401)
Q Consensus 85 ~~~a~a~~~lg~~eeA~~~~~kal~l~P~~~~~~~~L 121 (401)
..+|..+...|++++|+.+|-+|+.+.|+-......+
T Consensus 21 V~~GE~L~~~g~~~~~~~hf~nAl~Vc~qP~~LL~i~ 57 (73)
T 3ax2_A 21 IQLGEELLAQGDYEKGVDHLTNAIAVCGQPQQLLQVL 57 (73)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTCSSCHHHHHHH
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 3478888888999999998999999988765554444
No 329
>3t5v_B Nuclear mRNA export protein THP1; PCI, mRNA nuclear export, mRNA, nuclear, transcription; 2.90A {Saccharomyces cerevisiae}
Probab=61.00 E-value=18 Score=36.17 Aligned_cols=92 Identities=3% Similarity=-0.036 Sum_probs=64.3
Q ss_pred CHHHHHHHHHHHHhhcCCCCc---------chH---HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC----------CCH
Q psy4703 24 DYETALDFYTKALKVTAEESH---------ERA---TCLKNRAAVYLKQNQNDKVIEDCSKSLEIVP----------DDP 81 (401)
Q Consensus 24 ~y~eAi~~y~~Al~l~~p~~~---------~~~---~~~~n~a~~y~klg~y~~Ai~~~~kAL~ldP----------~~~ 81 (401)
..++|.....++...+.+++. ... .+..++..+|+++++..-|-..+...-...+ ..+
T Consensus 141 ~le~~a~~i~k~F~~cl~Dr~~~~~~s~p~kk~~~l~l~n~L~kiYFkl~~~~lckni~k~i~~~~~~p~~~~~p~~q~v 220 (455)
T 3t5v_B 141 FLSHISSILSRLFNSIKPPRGNASSTNIPGKQRILLYLVNKLNNIYFRIESPQLCSNIFKNFQPKSMLAHFNEYQLDQQI 220 (455)
T ss_dssp HHHHHHHHHHHHHHHCCCC----CCSSCCHHHHHHHHHHHHHHHHHHHSSCCTTHHHHHHTHHHHCCCSCGGGSCHHHHH
T ss_pred HHHHHHHHHHHHHHHhcccCCCcccccccccchhHHHHHHHHHHHHHHcCCHHHHHHHHHHhccCCCCcChhhCCccceE
Confidence 456677777777776532110 111 2334567889999998888777754322221 225
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhh-CCCCc
Q psy4703 82 KALFRRCQAYEAIGKFEEAYTDAKHIHRV-EPTNK 115 (401)
Q Consensus 82 kA~~~~a~a~~~lg~~eeA~~~~~kal~l-~P~~~ 115 (401)
..+|.+|+.++..++|.+|..++..|+.. .|.+.
T Consensus 221 ~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~lcp~~~ 255 (455)
T 3t5v_B 221 EYRYLLGRYYLLNSQVHNAFVQFNEAFQSLLNLPL 255 (455)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCCC
T ss_pred eeeHHHHHHHHHHccHHHHHHHHHHHHHhcCCccc
Confidence 67899999999999999999999999998 88653
No 330
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=60.75 E-value=10 Score=30.51 Aligned_cols=14 Identities=29% Similarity=0.406 Sum_probs=6.7
Q ss_pred HHHHHHHHHHHhhc
Q psy4703 26 ETALDFYTKALKVT 39 (401)
Q Consensus 26 ~eAi~~y~~Al~l~ 39 (401)
+.|+.+..+|++.+
T Consensus 16 ~kAi~lv~~Ave~D 29 (117)
T 2cpt_A 16 QKAIDLASKAAQED 29 (117)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 34455555554444
No 331
>1qsa_A Protein (soluble lytic transglycosylase SLT70); alpha-superhelix, transferase; HET: GOL; 1.65A {Escherichia coli} SCOP: a.118.5.1 d.2.1.6 PDB: 1qte_A* 1sly_A*
Probab=60.26 E-value=32 Score=35.71 Aligned_cols=121 Identities=9% Similarity=-0.063 Sum_probs=74.3
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHhhcCCCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc
Q psy4703 15 SGNSAFKQGDYETALDFYTKALKVTAEESHERATCLKNRAAVYLKQNQNDKVIEDCSKSLEIVPDDPKALFRRCQAYEAI 94 (401)
Q Consensus 15 ~Gn~~~~~g~y~eAi~~y~~Al~l~~p~~~~~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~ldP~~~kA~~~~a~a~~~l 94 (401)
.+...+...+.+.|...|........-+.......+..+|.-++..+...++...+.++....+++...-++.+.+ +..
T Consensus 220 ~~~~rlar~d~~~A~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~r~A-lr~ 298 (618)
T 1qsa_A 220 VAFASVARQDAENARLMIPSLAQAQQLNEDQIQELRDIVAWRLMGNDVTDEQAKWRDDAIMRSQSTSLIERRVRMA-LGT 298 (618)
T ss_dssp HHHHHHHHHCHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTSCSTTCCHHHHHHHHHHHHTCCCHHHHHHHHHHH-HHH
T ss_pred HHHHHHHhcCHHHHHHHHHhhhhccCCCHHHHHHHHHHHHHHHHHcCCChHHHHHHHhccccCCChHHHHHHHHHH-HHC
Confidence 3555566678899999988765433111112223333344444444535677778887766555444444444444 467
Q ss_pred CCHHHHHHHHHHHHhhCCCCccHHHHHHHHHHHHHHHHHHHH
Q psy4703 95 GKFEEAYTDAKHIHRVEPTNKAIQPVLSRLFAIVTKRMQENE 136 (401)
Q Consensus 95 g~~eeA~~~~~kal~l~P~~~~~~~~L~~l~~~~~~~~~a~~ 136 (401)
|+++.|...|++.-.-.+........+++.....++..++..
T Consensus 299 ~d~~~a~~~~~~l~~~~~~~~r~~YW~~ra~~~~g~~~~a~~ 340 (618)
T 1qsa_A 299 GDRRGLNTWLARLPMEAKEKDEWRYWQADLLLERGREAEAKE 340 (618)
T ss_dssp TCHHHHHHHHHHSCTTGGGSHHHHHHHHHHHHHTTCHHHHHH
T ss_pred CCHHHHHHHHHHccccccccHhHHHHHHHHHHHcCCHHHHHH
Confidence 999999999976544333456678889998887777655544
No 332
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=60.13 E-value=15 Score=28.29 Aligned_cols=28 Identities=21% Similarity=0.165 Sum_probs=16.4
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q psy4703 47 ATCLKNRAAVYLKQNQNDKVIEDCSKSL 74 (401)
Q Consensus 47 ~~~~~n~a~~y~klg~y~~Ai~~~~kAL 74 (401)
+-.+..+|..+++.|+|++||.+..+|.
T Consensus 15 AH~~~RrAe~ll~~gkydeAIech~kAa 42 (97)
T 2crb_A 15 AHQQSRRADRLLAAGKYEEAISCHRKAT 42 (97)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred hhHhhhHHHHHHhcCCHHHHHHHHHHHH
Confidence 3445556666666666666666555554
No 333
>2yua_A Williams-beuren syndrome chromosome region 18 protein; J domain, all helix protein, chaperone, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=59.67 E-value=19 Score=27.68 Aligned_cols=56 Identities=11% Similarity=0.016 Sum_probs=38.3
Q ss_pred HHHHHhhc-CCCChhHHHHHHHHHHHhhhcchh-----hHHHhhhhHHHHHHHHhhccCchhHHhhH
Q psy4703 144 NMFKYVFD-TSAPMDKRVTAVNNLVVLAREMSG-----AEMLLKSGVAKQINTLLKCETNEEIYLGE 204 (401)
Q Consensus 144 ~~~~~~~~-~~~~~~~~~~a~~~L~~l~~~~~g-----ae~~~~e~~v~~L~~ll~~~~~~e~~lA~ 204 (401)
++|+++.. ...+.+.+..+++.|...+|+|.. ++..|+. |....++|. ++.....|
T Consensus 18 ~~Y~vLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~--i~~Ay~~L~---d~~~R~~Y 79 (99)
T 2yua_A 18 ALYDLLGVPSTATQAQIKAAYYRQCFLYHPDRNSGSAEAAERFTR--ISQAYVVLG---SATLRRKY 79 (99)
T ss_dssp HHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCSSCSHHHHHHHH--HHHHHHHTT---SHHHHHHH
T ss_pred CHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCHHHHHHHHH--HHHHHHHHC---CHHHHHHH
Confidence 46888877 567788999999999999998754 2344433 555555555 66663333
No 334
>1wy6_A Hypothetical protein ST1625; helical repeat protein, structural genomics, unknown function; 2.20A {Sulfolobus tokodaii} SCOP: a.118.20.1
Probab=58.68 E-value=78 Score=26.54 Aligned_cols=61 Identities=21% Similarity=0.096 Sum_probs=43.5
Q ss_pred HHHHHHHHH-HcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Q psy4703 50 LKNRAAVYL-KQNQNDKVIEDCSKSLEIVPDDPKALFRRCQAYEAIGKFEEAYTDAKHIHRV 110 (401)
Q Consensus 50 ~~n~a~~y~-klg~y~~Ai~~~~kAL~ldP~~~kA~~~~a~a~~~lg~~eeA~~~~~kal~l 110 (401)
|..+|.-++ ..|+-++--..+...+.-++-++..++.+|.+|.++|+-.+|-..+.+|.+-
T Consensus 93 ~vd~ALd~lv~~~KkDqLdki~~~~l~n~~~~~~~l~kia~Ay~Klg~~r~a~eLl~~AC~k 154 (172)
T 1wy6_A 93 HVNKALDILVIQGKRDKLEEIGREILKNNEVSASILVAIANALRRVGDERDATTLLIEACKK 154 (172)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHC--CCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhccHhHHHHHHHHHhccCCCChHHHHHHHHHHHHhcchhhHHHHHHHHHHh
Confidence 444554444 5566555555555555666778999999999999999999999999888763
No 335
>2ctr_A DNAJ homolog subfamily B member 9; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=58.59 E-value=23 Score=26.49 Aligned_cols=52 Identities=13% Similarity=0.085 Sum_probs=35.3
Q ss_pred HHHHHhhc-CCCChhHHHHHHHHHHHhhhcchh----hHHHhhhhHHHHHHHHhhccCchhH
Q psy4703 144 NMFKYVFD-TSAPMDKRVTAVNNLVVLAREMSG----AEMLLKSGVAKQINTLLKCETNEEI 200 (401)
Q Consensus 144 ~~~~~~~~-~~~~~~~~~~a~~~L~~l~~~~~g----ae~~~~e~~v~~L~~ll~~~~~~e~ 200 (401)
++|+++.. ...+.+.+..+++.|....|+|.. ++..|.. +....++|. ++..
T Consensus 8 ~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~a~~~f~~--i~~Ay~~L~---d~~~ 64 (88)
T 2ctr_A 8 SYYDILGVPKSASERQIKKAFHKLAMKYHPDKNKSPDAEAKFRE--IAEAYETLS---DANR 64 (88)
T ss_dssp SHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCCSHHHHHHHHH--HHHHHHHHH---SSHH
T ss_pred CHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCChHHHHHHHH--HHHHHHHHC---CHHH
Confidence 46777766 567788899999999999999753 3344333 555555555 4554
No 336
>2dn9_A DNAJ homolog subfamily A member 3; J-domain, TID1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=57.94 E-value=22 Score=25.77 Aligned_cols=52 Identities=12% Similarity=0.046 Sum_probs=35.3
Q ss_pred HHHHHhhc-CCCChhHHHHHHHHHHHhhhcchh-----hHHHhhhhHHHHHHHHhhccCchhH
Q psy4703 144 NMFKYVFD-TSAPMDKRVTAVNNLVVLAREMSG-----AEMLLKSGVAKQINTLLKCETNEEI 200 (401)
Q Consensus 144 ~~~~~~~~-~~~~~~~~~~a~~~L~~l~~~~~g-----ae~~~~e~~v~~L~~ll~~~~~~e~ 200 (401)
++|+++.. ...+.+.+..+++.+....|++.. ++..|.. +....+++. ++..
T Consensus 8 ~~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPD~~~~~~~a~~~f~~--i~~Ay~~L~---d~~~ 65 (79)
T 2dn9_A 8 DYYQILGVPRNASQKEIKKAYYQLAKKYHPDTNKDDPKAKEKFSQ--LAEAYEVLS---DEVK 65 (79)
T ss_dssp CHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCSSCTTHHHHHHH--HHHHHHHHH---SHHH
T ss_pred CHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCHHHHHHHHH--HHHHHHHHC---CHHH
Confidence 36777766 567788899999999999998743 2344433 555555555 5555
No 337
>2dl1_A Spartin; SPG20, MIT, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=57.07 E-value=31 Score=27.66 Aligned_cols=62 Identities=10% Similarity=-0.041 Sum_probs=38.3
Q ss_pred CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC----CccHHHHHHHHHHHHHHH
Q psy4703 62 QNDKVIEDCSKSLEIVPDDPKALFRRCQAYEAIGKFEEAYTDAKHIHRVEPT----NKAIQPVLSRLFAIVTKR 131 (401)
Q Consensus 62 ~y~~Ai~~~~kAL~ldP~~~kA~~~~a~a~~~lg~~eeA~~~~~kal~l~P~----~~~~~~~L~~l~~~~~~~ 131 (401)
.|++|..+.+++|.+|- .|.-...+.-|...+..+++++.+..+ ....|....++...+...
T Consensus 18 ~h~~AF~~Is~AL~~DE--------~g~k~~Al~lYk~GI~eLe~Gl~I~~~~~~~~g~~we~Ar~lq~KM~~n 83 (116)
T 2dl1_A 18 AYKKAFLFVNKGLNTDE--------LGQKEEAKNYYKQGIGHLLRGISISSKESEHTGPGWESARQMQQKMKET 83 (116)
T ss_dssp HHHHHHHHHHHHHHHHH--------HTCHHHHHHHHHHHHHHHHHHHSSCCCCTTCCCSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhhh--------cCCHHHHHHHHHHHHHHHHHhccccccCCCCCChhHHHHHHHHHHHHHH
Confidence 36778888888888774 133334444455566667777777663 245666666666655554
No 338
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=56.93 E-value=57 Score=24.44 Aligned_cols=24 Identities=8% Similarity=0.124 Sum_probs=14.0
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHh
Q psy4703 86 RRCQAYEAIGKFEEAYTDAKHIHR 109 (401)
Q Consensus 86 ~~a~a~~~lg~~eeA~~~~~kal~ 109 (401)
.+|.-.-..|+|++|+..|..+++
T Consensus 21 ~~Ave~D~~g~y~eAl~lY~~Aie 44 (86)
T 4a5x_A 21 KRAVELDSESRYPQALVCYQEGID 44 (86)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHH
Confidence 334444566666666666666654
No 339
>1hdj_A Human HSP40, HDJ-1; molecular chaperone; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=56.17 E-value=19 Score=26.03 Aligned_cols=55 Identities=11% Similarity=-0.054 Sum_probs=36.5
Q ss_pred HHHHhhc-CCCChhHHHHHHHHHHHhhhcchh----hHHHhhhhHHHHHHHHhhccCchhHHhhH
Q psy4703 145 MFKYVFD-TSAPMDKRVTAVNNLVVLAREMSG----AEMLLKSGVAKQINTLLKCETNEEIYLGE 204 (401)
Q Consensus 145 ~~~~~~~-~~~~~~~~~~a~~~L~~l~~~~~g----ae~~~~e~~v~~L~~ll~~~~~~e~~lA~ 204 (401)
+|+++.. ...+.+.+..+++.+....|++.. ++..|.. +....+++. ++.....|
T Consensus 5 ~y~iLgv~~~as~~~Ik~ayr~l~~~~HPD~~~~~~~~~~f~~--i~~Ay~~L~---d~~~R~~Y 64 (77)
T 1hdj_A 5 YYQTLGLARGASDEEIKRAYRRQALRYHPDKNKEPGAEEKFKE--IAEAYDVLS---DPRKREIF 64 (77)
T ss_dssp SHHHHTCCTTCCHHHHHHHHHHHHHTTCTTTCCCTTHHHHHHH--HHHHHHHTT---CHHHHHHH
T ss_pred HHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHH--HHHHHHHHC---CHHHHHHH
Confidence 4666666 557778899999999999999753 3444443 555555554 66653333
No 340
>1wjz_A 1700030A21RIK protein; J-domain, DNAJ like protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, chaperone; NMR {Mus musculus} SCOP: a.2.3.1
Probab=54.82 E-value=13 Score=28.19 Aligned_cols=31 Identities=16% Similarity=0.164 Sum_probs=25.7
Q ss_pred HHHHHhhc-CCCChhHHHHHHHHHHHhhhcch
Q psy4703 144 NMFKYVFD-TSAPMDKRVTAVNNLVVLAREMS 174 (401)
Q Consensus 144 ~~~~~~~~-~~~~~~~~~~a~~~L~~l~~~~~ 174 (401)
++|+++.. ...+.+.+..+++.+....|+|.
T Consensus 17 ~~y~iLgv~~~as~~eIk~aYr~l~~~~HPDk 48 (94)
T 1wjz_A 17 DWYSILGADPSANMSDLKQKYQKLILLYHPDK 48 (94)
T ss_dssp CHHHHTTCCTTCCHHHHHHHHHHTTSSSCSTT
T ss_pred ChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCC
Confidence 46777776 56778899999999999999876
No 341
>1om2_A Protein (mitochondrial import receptor subunit TOM20); mitochondrial protein import across outer membrane, receptor for presequences; NMR {Rattus norvegicus} SCOP: a.23.4.1
Probab=54.07 E-value=12 Score=29.04 Aligned_cols=29 Identities=34% Similarity=0.574 Sum_probs=26.3
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHhhcCCC
Q psy4703 13 KESGNSAFKQGDYETALDFYTKALKVTAEE 42 (401)
Q Consensus 13 ~~~Gn~~~~~g~y~eAi~~y~~Al~l~~p~ 42 (401)
...|..++..|+++.|+.+|.+||.++ |.
T Consensus 24 V~lGE~L~~~g~~e~av~Hf~nAl~Vc-~q 52 (95)
T 1om2_A 24 IQLGEELLAQGDYEKGVDHLTNAIAVC-GQ 52 (95)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHH-SC
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHc-CC
Confidence 367999999999999999999999999 65
No 342
>2ctq_A DNAJ homolog subfamily C member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=54.06 E-value=27 Score=27.40 Aligned_cols=60 Identities=7% Similarity=0.067 Sum_probs=42.1
Q ss_pred HHHHHhhc-CCCChhHHHHHHHHHHHhhhcchhh-----HHHhhhhHHHHHHHHhhccCchhHHhhHHHHH
Q psy4703 144 NMFKYVFD-TSAPMDKRVTAVNNLVVLAREMSGA-----EMLLKSGVAKQINTLLKCETNEEIYLGEEDFI 208 (401)
Q Consensus 144 ~~~~~~~~-~~~~~~~~~~a~~~L~~l~~~~~ga-----e~~~~e~~v~~L~~ll~~~~~~e~~lA~e~fi 208 (401)
++|+++.. ...+.+.+..+++.+....|++... +..|+. +....++|. ++.....|+.+.
T Consensus 21 d~Y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~--i~~Ay~vL~---d~~~R~~YD~~~ 86 (112)
T 2ctq_A 21 DYYTLLGCDELSSVEQILAEFKVRALECHPDKHPENPKAVETFQK--LQKAKEILT---NEESRARYDHWR 86 (112)
T ss_dssp CHHHHTTCCTTSCHHHHHHHHHHHHHTTCTTTCTTCSTHHHHHHH--HHHHHHHHH---SHHHHHHHHHHH
T ss_pred CHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHH--HHHHHHHHC---CHHHHHHHHHhh
Confidence 46777776 5677788999999999999987543 444444 666666666 777755565554
No 343
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=54.00 E-value=48 Score=36.15 Aligned_cols=85 Identities=7% Similarity=-0.052 Sum_probs=59.9
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHh-hcCC------------------CCcchHHHHHHHHHHHHHcCCHHHHHHHH
Q psy4703 10 NKLKESGNSAFKQGDYETALDFYTKALK-VTAE------------------ESHERATCLKNRAAVYLKQNQNDKVIEDC 70 (401)
Q Consensus 10 ~~l~~~Gn~~~~~g~y~eAi~~y~~Al~-l~~p------------------~~~~~~~~~~n~a~~y~klg~y~~Ai~~~ 70 (401)
-.-+-+|..++..|++++|..+|.+|-. +..+ .......+|......+.+.+-|+.+++.+
T Consensus 841 ~~~yv~gr~~L~~ge~~~A~~~F~kAA~gl~~~~~~~~~~~~~~~ll~~~e~~~~~~~YY~hV~~LFE~~~a~~~vi~fA 920 (950)
T 4gq2_M 841 IAVYLKALIYLKSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKYHHQNLLSCYYLHLSKKLFEESAYIDALEFS 920 (950)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHTCCCTTCSSCCSCGGGHHHHHHHHHTTTCSHHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHhhhcccCcccccchhhhhhccCcccccchhHHHHHHHHHHHHhcCCHHHHHHHH
Confidence 3447899999999999999999987642 1100 01234457788888888999999999999
Q ss_pred HHHHHh-CCCCHH----HHHHHHHHHHHc
Q psy4703 71 SKSLEI-VPDDPK----ALFRRCQAYEAI 94 (401)
Q Consensus 71 ~kAL~l-dP~~~k----A~~~~a~a~~~l 94 (401)
..||+. .+++.. .|.++=.+...+
T Consensus 921 ~lAI~~~~~dd~~l~~~l~~r~f~~a~a~ 949 (950)
T 4gq2_M 921 LLADASKETDDEDLSIAITHETLKTACAA 949 (950)
T ss_dssp HHHHHTCCSCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhhcccCCccchHHHHHHHHHHHhhC
Confidence 999975 445544 444444444433
No 344
>2dmx_A DNAJ homolog subfamily B member 8; DNAJ J domain, helix-turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=53.09 E-value=36 Score=25.47 Aligned_cols=32 Identities=16% Similarity=0.054 Sum_probs=25.6
Q ss_pred HHHHHhhc-CCCChhHHHHHHHHHHHhhhcchh
Q psy4703 144 NMFKYVFD-TSAPMDKRVTAVNNLVVLAREMSG 175 (401)
Q Consensus 144 ~~~~~~~~-~~~~~~~~~~a~~~L~~l~~~~~g 175 (401)
++|+++.. ...+.+.+..+++.|....|+|..
T Consensus 10 ~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~ 42 (92)
T 2dmx_A 10 NYYEVLGVQASASPEDIKKAYRKLALRWHPDKN 42 (92)
T ss_dssp CHHHHHTCCTTCCTTHHHHHHHHHHHHTCTTTC
T ss_pred CHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCC
Confidence 46777776 556778899999999999999753
No 345
>4b4t_S RPN3, 26S proteasome regulatory subunit RPN3; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=53.07 E-value=18 Score=36.74 Aligned_cols=74 Identities=14% Similarity=0.060 Sum_probs=56.9
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcC-CCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH
Q psy4703 8 DYNKLKESGNSAFKQGDYETALDFYTKALKVTA-EESHERATCLKNRAAVYLKQNQNDKVIEDCSKSLEIVPDDP 81 (401)
Q Consensus 8 ~a~~l~~~Gn~~~~~g~y~eAi~~y~~Al~l~~-p~~~~~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~ldP~~~ 81 (401)
.+..+...-..|...+.|+.|..+..++.--.. ..+.....+++..|.++.-.++|.+|.+++..|+...|.+.
T Consensus 230 qa~l~nllLRnYL~~~~y~qA~~lvsk~~fP~~~~sn~q~~rY~YY~GRI~a~q~~Y~eA~~~L~~A~rkap~~~ 304 (523)
T 4b4t_S 230 KAMLINLILRDFLNNGEVDSASDFISKLEYPHTDVSSSLEARYFFYLSKINAIQLDYSTANEYIIAAIRKAPHNS 304 (523)
T ss_dssp HHHHHHHHHHHHHHSSCSTTHHHHHHHHCSCTTTSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTSSCSCSS
T ss_pred hHHHHHHHHHHHHccCcHHHHHHHHhcCcCCcccCCHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCcch
Confidence 345555666778889999999999998852110 01234577888899999999999999999999999887653
No 346
>2ej7_A HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=52.40 E-value=26 Score=25.60 Aligned_cols=56 Identities=11% Similarity=0.004 Sum_probs=36.1
Q ss_pred HHHHHhhc-CCCChhHHHHHHHHHHHhhhcchhh------HHHhhhhHHHHHHHHhhccCchhHHhhH
Q psy4703 144 NMFKYVFD-TSAPMDKRVTAVNNLVVLAREMSGA------EMLLKSGVAKQINTLLKCETNEEIYLGE 204 (401)
Q Consensus 144 ~~~~~~~~-~~~~~~~~~~a~~~L~~l~~~~~ga------e~~~~e~~v~~L~~ll~~~~~~e~~lA~ 204 (401)
++|+++.. ...+.+.+..+++.+....|++... +..|.. +....+++. ++.....|
T Consensus 10 ~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~--i~~Ay~~L~---d~~~R~~Y 72 (82)
T 2ej7_A 10 DYYEVLDVPRQASSEAIKKAYRKLALKWHPDKNPENKEEAERRFKQ--VAEAYEVLS---DAKKRDIY 72 (82)
T ss_dssp CHHHHTTCCTTCCHHHHHHHHHHHHTTSCTTTCSTTHHHHHHHHHH--HHHHHHHHS---STTHHHHH
T ss_pred CHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHH--HHHHHHHHC---CHHHHHHH
Confidence 46777776 5577888999999999999987532 233333 455555554 55553333
No 347
>3t5x_A PCI domain-containing protein 2; PCI, mRNA nuclear export, transcription; 2.12A {Homo sapiens}
Probab=51.89 E-value=29 Score=30.41 Aligned_cols=35 Identities=14% Similarity=-0.040 Sum_probs=18.2
Q ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Q psy4703 46 RATCLKNRAAVYLKQNQNDKVIEDCSKSLEIVPDD 80 (401)
Q Consensus 46 ~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~ldP~~ 80 (401)
....++.+|..++..++|.+|..++..|+...|..
T Consensus 13 ~v~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~~~~~ 47 (203)
T 3t5x_A 13 RVTYKYYVGRKAMFDSDFKQAEEYLSFAFEHCHRS 47 (203)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCTT
T ss_pred HHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHCCHh
Confidence 33444555555555555555555555555555433
No 348
>2o37_A Protein SIS1; HSP40, J-domain, cochaperone, APC90055.5, structural genomics, PSI-2, protein structure initiative; 1.25A {Saccharomyces cerevisiae}
Probab=51.19 E-value=38 Score=25.44 Aligned_cols=57 Identities=7% Similarity=-0.037 Sum_probs=38.2
Q ss_pred HHHHHhhc-CCCChhHHHHHHHHHHHhhhcchh--hHHHhhhhHHHHHHHHhhccCchhHHhhHH
Q psy4703 144 NMFKYVFD-TSAPMDKRVTAVNNLVVLAREMSG--AEMLLKSGVAKQINTLLKCETNEEIYLGEE 205 (401)
Q Consensus 144 ~~~~~~~~-~~~~~~~~~~a~~~L~~l~~~~~g--ae~~~~e~~v~~L~~ll~~~~~~e~~lA~e 205 (401)
++|+++.. ...+.+.+..+++.+....|++.. ....|+. +....++|. ++.....|+
T Consensus 9 ~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~f~~--i~~Ay~~L~---d~~~R~~YD 68 (92)
T 2o37_A 9 KLYDLLGVSPSANEQELKKGYRKAALKYHPDKPTGDTEKFKE--ISEAFEILN---DPQKREIYD 68 (92)
T ss_dssp HHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTSTTCCHHHHHH--HHHHHHHHT---SHHHHHHHH
T ss_pred CHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCChHHHHHH--HHHHHHHHC---CHHHHHHHH
Confidence 46888776 557788899999999999999754 2333333 555555555 666633333
No 349
>2wpv_A GET4, UPF0363 protein YOR164C; golgi-ER trafficking, tail-anchored protein, protein binding GET4; 1.99A {Saccharomyces cerevisiae} PDB: 3lku_A
Probab=50.11 E-value=1.7e+02 Score=27.46 Aligned_cols=27 Identities=15% Similarity=-0.209 Sum_probs=19.6
Q ss_pred CCHHHHHHHHHHHHHcCCHHHHHHHHH
Q psy4703 79 DDPKALFRRCQAYEAIGKFEEAYTDAK 105 (401)
Q Consensus 79 ~~~kA~~~~a~a~~~lg~~eeA~~~~~ 105 (401)
.++..|..+|..|.+.|++.+|..+|-
T Consensus 132 Gdp~LH~~~a~~~~~e~~~~~A~~H~i 158 (312)
T 2wpv_A 132 GDPYLHNTIGSKLLEGDFVYEAERYFM 158 (312)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHhhcCCHHHHHHHHH
Confidence 467777777777777777777777663
No 350
>2qsa_A DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, structural genomics, PSI-2, Pro structure initiative; 1.68A {Caenorhabditis elegans}
Probab=49.41 E-value=35 Score=26.53 Aligned_cols=60 Identities=13% Similarity=0.066 Sum_probs=39.8
Q ss_pred HHHHHhhc-CCC-ChhHHHHHHHHHHHhhhcchhh--------HHHhhhhHHHHHHHHhhccCchhHHhhHHHHH
Q psy4703 144 NMFKYVFD-TSA-PMDKRVTAVNNLVVLAREMSGA--------EMLLKSGVAKQINTLLKCETNEEIYLGEEDFI 208 (401)
Q Consensus 144 ~~~~~~~~-~~~-~~~~~~~a~~~L~~l~~~~~ga--------e~~~~e~~v~~L~~ll~~~~~~e~~lA~e~fi 208 (401)
++|+++.. ... +.+.+..+++.+....|++... +..|.. +....+++. ++.....|+.+.
T Consensus 16 ~~y~iLgv~~~a~s~~eIk~aYr~l~~~~HPDk~~~~~~~~~a~~~f~~--i~~AY~~L~---d~~~R~~YD~~~ 85 (109)
T 2qsa_A 16 NCYDVLEVNREEFDKQKLAKAYRALARKHHPDRVKNKEEKLLAEERFRV--IATAYETLK---DDEAKTNYDYYL 85 (109)
T ss_dssp CHHHHTTCCGGGCCHHHHHHHHHHHHHHTCGGGCCSHHHHHHHHHHHHH--HHHHHHHHH---SHHHHHHHHHHH
T ss_pred CHHHHcCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccccHHHHHHHHH--HHHHHHHHC---CHHHHHHHHHhc
Confidence 46777776 445 7788899999999999998432 233333 555555555 676655565554
No 351
>2lgw_A DNAJ homolog subfamily B member 2; J domain, HSJ1A, CO-chaperon, chaperone; NMR {Homo sapiens}
Probab=49.15 E-value=36 Score=26.12 Aligned_cols=52 Identities=15% Similarity=0.096 Sum_probs=34.5
Q ss_pred HHHHHhhc-CCCChhHHHHHHHHHHHhhhcchh------hHHHhhhhHHHHHHHHhhccCchhH
Q psy4703 144 NMFKYVFD-TSAPMDKRVTAVNNLVVLAREMSG------AEMLLKSGVAKQINTLLKCETNEEI 200 (401)
Q Consensus 144 ~~~~~~~~-~~~~~~~~~~a~~~L~~l~~~~~g------ae~~~~e~~v~~L~~ll~~~~~~e~ 200 (401)
++|+++.. ...+.+.+..+++.+....++|.. ++..|.. +....+++. ++..
T Consensus 3 d~Y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~~a~~~f~~--I~~AY~vL~---d~~~ 61 (99)
T 2lgw_A 3 SYYEILDVPRSASADDIKKAYRRKALQWHPDKNPDNKEFAEKKFKE--VAEAYEVLS---DKHK 61 (99)
T ss_dssp CHHHHSSSCTTSCHHHHHHHHHHHHHHTSTTTCCSCCHHHHHHHHH--HHHHHHHHH---SHHH
T ss_pred CHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCccHHHHHHHHHH--HHHHHHHHC---CHHH
Confidence 35777766 556778899999999999998753 2333333 455555554 5555
No 352
>2cfu_A SDSA1; SDS-hydrolase, lactamase, hydrolase; HET: 1DB; 1.9A {Pseudomonas aeruginosa} SCOP: d.106.1.3 d.157.1.13 PDB: 2cfz_A* 2cg2_A 2cg3_A*
Probab=48.53 E-value=29 Score=36.21 Aligned_cols=53 Identities=15% Similarity=0.206 Sum_probs=44.1
Q ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCccHHHHHHHHHHHHHHHH
Q psy4703 80 DPKALFRRCQAYEAIGKFEEAYTDAKHIHRVEPTNKAIQPVLSRLFAIVTKRM 132 (401)
Q Consensus 80 ~~kA~~~~a~a~~~lg~~eeA~~~~~kal~l~P~~~~~~~~L~~l~~~~~~~~ 132 (401)
-..+...+|+..+..|+|.-|.+....++..+|+|.+++..++.+++.++...
T Consensus 448 g~~~~~~~a~~~~~~g~~~wa~~l~~~~~~~~p~~~~a~~l~a~~~~~l~~~~ 500 (658)
T 2cfu_A 448 GAERLLEQARASYARGEYRWVVEVVNRLVFAEPDNRAARELQADALEQLGYQA 500 (658)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHhc
Confidence 45667778888888899999999999888889999888888888888887654
No 353
>2och_A Hypothetical protein DNJ-12; HSP40, J-domain, chaperone, APC90013.2, structural genomics, protein structure initiative; 1.86A {Caenorhabditis elegans} PDB: 2lo1_A
Probab=48.07 E-value=32 Score=24.57 Aligned_cols=56 Identities=11% Similarity=0.007 Sum_probs=37.6
Q ss_pred HHHHHhhc-CCCChhHHHHHHHHHHHhhhcchhh--HHHhhhhHHHHHHHHhhccCchhHHhhH
Q psy4703 144 NMFKYVFD-TSAPMDKRVTAVNNLVVLAREMSGA--EMLLKSGVAKQINTLLKCETNEEIYLGE 204 (401)
Q Consensus 144 ~~~~~~~~-~~~~~~~~~~a~~~L~~l~~~~~ga--e~~~~e~~v~~L~~ll~~~~~~e~~lA~ 204 (401)
++|+++.. ...+.+.+..+++.+....|++... ...|.. +....+++. ++.....|
T Consensus 9 ~~y~iLgl~~~a~~~eIk~ayr~l~~~~HPD~~~~~~~~f~~--i~~Ay~~L~---d~~~R~~Y 67 (73)
T 2och_A 9 GYYDVLGVKPDASDNELKKAYRKMALKFHPDKNPDGAEQFKQ--ISQAYEVLS---DEKKRQIY 67 (73)
T ss_dssp CHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCTTCHHHHHH--HHHHHHHHT---SHHHHHHH
T ss_pred CHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCcCHHHHHHH--HHHHHHHHC---CHHHHHHH
Confidence 46777776 5577788899999999999997643 233333 555555555 66663334
No 354
>3t5x_A PCI domain-containing protein 2; PCI, mRNA nuclear export, transcription; 2.12A {Homo sapiens}
Probab=47.17 E-value=25 Score=30.85 Aligned_cols=34 Identities=6% Similarity=-0.148 Sum_probs=31.1
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC
Q psy4703 81 PKALFRRCQAYEAIGKFEEAYTDAKHIHRVEPTN 114 (401)
Q Consensus 81 ~kA~~~~a~a~~~lg~~eeA~~~~~kal~l~P~~ 114 (401)
+..+|.+|..++..++|.+|..++..|+...|.+
T Consensus 14 v~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~~~~~ 47 (203)
T 3t5x_A 14 VTYKYYVGRKAMFDSDFKQAEEYLSFAFEHCHRS 47 (203)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCTT
T ss_pred HHHHHHHHHHHHHHhCHHHHHHHHHHHHHHCCHh
Confidence 4568999999999999999999999999998865
No 355
>2br9_A 14-3-3E, 14-3-3 protein epsilon; cell regulator protein, 14-3-3, phosphoserine, structural GE consortium, SGC, ywhae; HET: SEP; 1.75A {Homo sapiens} PDB: 3ual_A* 2o98_A* 3m50_A* 3m51_A* 3axy_C*
Probab=46.48 E-value=37 Score=30.69 Aligned_cols=48 Identities=17% Similarity=0.170 Sum_probs=24.5
Q ss_pred HHHHHHHHHHhhc----CCCCcchHHHHHHHHHHHHH-cCCHHHHHHHHHHHH
Q psy4703 27 TALDFYTKALKVT----AEESHERATCLKNRAAVYLK-QNQNDKVIEDCSKSL 74 (401)
Q Consensus 27 eAi~~y~~Al~l~----~p~~~~~~~~~~n~a~~y~k-lg~y~~Ai~~~~kAL 74 (401)
.|...|++|.++. +|.+|....+..|.+..|+. +++.++|.....+|+
T Consensus 148 ~a~~aY~~A~~iA~~~L~pthPirLgLaLN~SVF~yEil~~~~~A~~lAk~af 200 (234)
T 2br9_A 148 NSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAF 200 (234)
T ss_dssp HHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHccCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 3555555555432 15555555555555555554 455555555554443
No 356
>2ctw_A DNAJ homolog subfamily C member 5; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=45.88 E-value=38 Score=26.43 Aligned_cols=58 Identities=9% Similarity=0.031 Sum_probs=39.3
Q ss_pred HHHHHhhc-CCCChhHHHHHHHHHHHhhhcchhh-----HHHhhhhHHHHHHHHhhccCchhHHhhHHH
Q psy4703 144 NMFKYVFD-TSAPMDKRVTAVNNLVVLAREMSGA-----EMLLKSGVAKQINTLLKCETNEEIYLGEED 206 (401)
Q Consensus 144 ~~~~~~~~-~~~~~~~~~~a~~~L~~l~~~~~ga-----e~~~~e~~v~~L~~ll~~~~~~e~~lA~e~ 206 (401)
++|+++.. ...+.+.+..+++.|....|+|... +..|+. +....++|. ++.....|+.
T Consensus 18 ~~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~a~~~f~~--i~~Ay~vL~---d~~~R~~YD~ 81 (109)
T 2ctw_A 18 SLYHVLGLDKNATSDDIKKSYRKLALKYHPDKNPDNPEAADKFKE--INNAHAILT---DATKRNIYDK 81 (109)
T ss_dssp CHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTSTTCHHHHHHHHH--HHHHHHHHT---CHHHHHHHHH
T ss_pred CHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHH--HHHHHHHHc---CHHHHHHHHH
Confidence 46777766 5677888999999999999987542 334333 555666665 6777444543
No 357
>1w63_A Adapter-related protein complex 1 gamma 1 subunit; endocytosis, clathrin adaptor, transport, coated PITS; 4.0A {Mus musculus} SCOP: i.23.1.1
Probab=43.54 E-value=1.2e+02 Score=30.91 Aligned_cols=134 Identities=11% Similarity=0.111 Sum_probs=73.7
Q ss_pred hHHHHHHHHhhccCchhHH-hhHHHHH------HHHHHhcHHHHHHHHcCCChhHHHHHHHhhhhccccCCCCCCCCCCC
Q psy4703 183 GVAKQINTLLKCETNEEIY-LGEEDFI------TSIIKQGVDILKRLYMSKNENIRVRALVGLCKLGSMGGSDASIRPFA 255 (401)
Q Consensus 183 ~~v~~L~~ll~~~~~~e~~-lA~e~fi------~~i~~~gv~~Lk~l~~s~~d~i~~ralvgLckl~~~gg~d~~~~~~~ 255 (401)
.++..+..++. +.+++++ ++...+. ..........+-.++..++..||.+|+-.|.+++...
T Consensus 313 ~a~~~L~~~L~-~~d~~vr~~aL~~L~~i~~~~p~~~~~~~~~i~~~l~d~d~~Ir~~alelL~~l~~~~---------- 381 (618)
T 1w63_A 313 LAINILGRFLL-NNDKNIRYVALTSLLKTVQTDHNAVQRHRSTIVDCLKDLDVSIKRRAMELSFALVNGN---------- 381 (618)
T ss_dssp HHHHHHHHHHT-CSSTTTHHHHHHHHHHHHHHHHHHHGGGHHHHHHGGGSSCHHHHHHHHHHHHHHCCSS----------
T ss_pred HHHHHHHHHHh-CCCCchHHHHHHHHHHHHhhCHHHHHHHHHHHHHHccCCChhHHHHHHHHHHHHcccc----------
Confidence 34556666665 5566653 3332222 1123344555666667778889999999888887531
Q ss_pred CCchHHHHHHHHhhhcCCCCCchhHHhHHhhhhhccCCHHHHHhhcCC-HHHHHHHHHHHhcCCCCcchhhhhhhHHhhc
Q psy4703 256 DGSTRKLAEACRRFLVNPARDPDIRRWAAEGLAYLTLDAEVKEALIED-KPALAALVDVASSVKYKNVWNGTQSDALKDV 334 (401)
Q Consensus 256 ~~s~~~l~~~~~~~l~~~~~~~~~~~~~~eglay~~~~~~vke~~~~d-~~~l~~l~~~~~~~~~~~~~~~~~~~~~~n~ 334 (401)
....+.+....|+.. .|.+.|+-++..++-+... +..+ ...+..|+++++.. +..+.+-++ ..+..+
T Consensus 382 --nv~~iv~eL~~~l~~--~d~e~r~~~v~~I~~la~k------~~~~~~~~v~~ll~lL~~~-~~~v~~~~~-~~l~~i 449 (618)
T 1w63_A 382 --NIRGMMKELLYFLDS--CEPEFKADCASGIFLAAEK------YAPSKRWHIDTIMRVLTTA-GSYVRDDAV-PNLIQL 449 (618)
T ss_dssp --STHHHHHHHHHHHHH--CCHHHHHHHHHHHHHHHHS------SCCCHHHHHHHHHHHHHHT-GGGSCSSHH-HHHHHH
T ss_pred --cHHHHHHHHHHHHHh--CCHHHHHHHHHHHHHHHHH------hCccHHHHHHHHHHHHHhc-cchhHHHHH-HHHHHH
Confidence 123455555566642 5678888888888877542 1111 23455666666655 333444344 333333
Q ss_pred ccCCc
Q psy4703 335 DKAFD 339 (401)
Q Consensus 335 ~~~~~ 339 (401)
-..+|
T Consensus 450 i~~~p 454 (618)
T 1w63_A 450 ITNSV 454 (618)
T ss_dssp HHHSC
T ss_pred HhcCh
Confidence 33333
No 358
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=43.02 E-value=51 Score=28.29 Aligned_cols=52 Identities=15% Similarity=0.149 Sum_probs=35.9
Q ss_pred HHHHHhhc-CCCChhHHHHHHHHHHHhhhcchh-----hHHHhhhhHHHHHHHHhhccCchhH
Q psy4703 144 NMFKYVFD-TSAPMDKRVTAVNNLVVLAREMSG-----AEMLLKSGVAKQINTLLKCETNEEI 200 (401)
Q Consensus 144 ~~~~~~~~-~~~~~~~~~~a~~~L~~l~~~~~g-----ae~~~~e~~v~~L~~ll~~~~~~e~ 200 (401)
++|+.+.. ...+.+.+..+++.+....|+|.. ++..|.. +....+++. ++..
T Consensus 3 ~~y~~l~~~~~a~~~~ik~ay~~l~~~~HPD~~~~~~~~~~~f~~--i~~Ay~~L~---~~~~ 60 (210)
T 3apq_A 3 NFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLK--INRAYEVLK---DEDL 60 (210)
T ss_dssp CHHHHHTCCTTCCHHHHHHHHHHHHHHHCGGGCTTCTTHHHHHHH--HHHHHHHHT---SHHH
T ss_pred CHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHH--HHHHHHHhC---CHHH
Confidence 46777776 567788899999999999999764 2333333 555555555 6666
No 359
>1om2_A Protein (mitochondrial import receptor subunit TOM20); mitochondrial protein import across outer membrane, receptor for presequences; NMR {Rattus norvegicus} SCOP: a.23.4.1
Probab=42.95 E-value=26 Score=27.06 Aligned_cols=34 Identities=12% Similarity=0.114 Sum_probs=26.3
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHhhCCCCccHH
Q psy4703 85 FRRCQAYEAIGKFEEAYTDAKHIHRVEPTNKAIQ 118 (401)
Q Consensus 85 ~~~a~a~~~lg~~eeA~~~~~kal~l~P~~~~~~ 118 (401)
..+|..+...|+++.|+.+|-+|+.+.|+-....
T Consensus 24 V~lGE~L~~~g~~e~av~Hf~nAl~Vc~qP~~LL 57 (95)
T 1om2_A 24 IQLGEELLAQGDYEKGVDHLTNAIAVCGQPQQLL 57 (95)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHHSCHHHHH
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHcCCHHHHH
Confidence 3478888888889999998888888887744433
No 360
>4fdd_A Transportin-1; heat repeats, karyopherin, nuclear import, protein transport importin, transportin, transport protein; 2.30A {Homo sapiens} PDB: 2ot8_A 2h4m_A 2z5k_A 2z5j_A 2qmr_A 2z5m_A 2z5n_A 2z5o_A 1qbk_B*
Probab=42.46 E-value=3.2e+02 Score=28.57 Aligned_cols=117 Identities=15% Similarity=0.081 Sum_probs=66.1
Q ss_pred HHHHHHHHcCCChhHHHHHHHhhhhccccCCCCCCCCCCCCCchHHHHHHHHhhhcCCCCCchhHHhHHhhhhhc-cCCH
Q psy4703 216 VDILKRLYMSKNENIRVRALVGLCKLGSMGGSDASIRPFADGSTRKLAEACRRFLVNPARDPDIRRWAAEGLAYL-TLDA 294 (401)
Q Consensus 216 v~~Lk~l~~s~~d~i~~ralvgLckl~~~gg~d~~~~~~~~~s~~~l~~~~~~~l~~~~~~~~~~~~~~eglay~-~~~~ 294 (401)
++.|.+++.+++..++..++..|.++....+........ ......+....-+++. ..+++.|..|++.|.-. ...+
T Consensus 130 l~~L~~~l~~~~~~~r~~al~~L~~i~~~~~~~~~~~~~-~~~~~~il~~l~~~l~--~~~~~vR~~A~~aL~~~~~~~~ 206 (852)
T 4fdd_A 130 LPKLCSLLDSEDYNTCEGAFGALQKICEDSAEILDSDVL-DRPLNIMIPKFLQFFK--HSSPKIRSHAVACVNQFIISRT 206 (852)
T ss_dssp HHHHHHHHSCSSHHHHHHHHHHHHHHHHHHTTHHHHCSS-SSCHHHHHHHHTTTTT--CSSHHHHHHHHHHHHTTTTTTC
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHhHHHhchhhh-cchHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHHhccc
Confidence 556666677777777776776665555433221110011 1111223333333332 34678899999998633 2222
Q ss_pred HHHHhhcCCHHHHHHHHHHHhcCCCCcchhhhhhhHHhhcccCCc
Q psy4703 295 EVKEALIEDKPALAALVDVASSVKYKNVWNGTQSDALKDVDKAFD 339 (401)
Q Consensus 295 ~vke~~~~d~~~l~~l~~~~~~~~~~~~~~~~~~~~~~n~~~~~~ 339 (401)
.. ....-+.++..|+.++.+. +..+..+++ .+|.++...+|
T Consensus 207 ~~--~~~~~~~~l~~l~~~~~d~-~~~vr~~a~-~~L~~l~~~~~ 247 (852)
T 4fdd_A 207 QA--LMLHIDSFIENLFALAGDE-EPEVRKNVC-RALVMLLEVRM 247 (852)
T ss_dssp HH--HHTSHHHHHHHHHHHHTCC-CHHHHHHHH-HHHHHHHHHCH
T ss_pred HH--HHHHHHHHHHHHHHHcCCC-CHHHHHHHH-HHHHHHHHhCH
Confidence 21 1111246888888887765 666777777 88888877776
No 361
>2o8p_A 14-3-3 domain containing protein; signaling protein, 14-3-3, cell regulator protein, cryptospo parvum, structural genomics; HET: MSE; 1.82A {Cryptosporidium parvum} SCOP: a.118.7.1
Probab=41.76 E-value=89 Score=28.00 Aligned_cols=56 Identities=11% Similarity=0.068 Sum_probs=43.6
Q ss_pred HHcCCHHHHHHHHHHHHhhc----CCCCcchHHHHHHHHHHHHH-cCCHHHHHHHHHHHHH
Q psy4703 20 FKQGDYETALDFYTKALKVT----AEESHERATCLKNRAAVYLK-QNQNDKVIEDCSKSLE 75 (401)
Q Consensus 20 ~~~g~y~eAi~~y~~Al~l~----~p~~~~~~~~~~n~a~~y~k-lg~y~~Ai~~~~kAL~ 75 (401)
|..|+-+.|...|+.|.++. +|.+|....+..|.+..|+. +++.++|.....+|+.
T Consensus 136 ~~~g~~e~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyYEIln~p~~Ac~lAk~Afd 196 (227)
T 2o8p_A 136 FGLCSLEDSKKIHQDAFTLLCEHPDKIEQLPLGFIQNLAYILSEKYGEKKQVFNMLNSLGK 196 (227)
T ss_dssp TTSSCHHHHHHHHHHHHHHHHHCGGGGGGSCHHHHHHHHHHHHHTSSCHHHHHHHHHHHHH
T ss_pred HccccHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Confidence 35677788999999887643 16778888888888887774 6788999988888866
No 362
>2rpa_A Katanin P60 ATPase-containing subunit A1; AAA ATPase, ATP-binding, cell cycle, cell division, cytoplas hydrolase, microtubule; NMR {Mus musculus}
Probab=41.72 E-value=31 Score=25.58 Aligned_cols=27 Identities=19% Similarity=0.313 Sum_probs=16.8
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhh
Q psy4703 12 LKESGNSAFKQGDYETALDFYTKALKV 38 (401)
Q Consensus 12 l~~~Gn~~~~~g~y~eAi~~y~~Al~l 38 (401)
....|..+...|+|+.|+.+|+.+++.
T Consensus 15 ~~k~ARe~Al~GnYdta~~yY~g~~~q 41 (78)
T 2rpa_A 15 NVKLAREYALLGNYDSAMVYYQGVLDQ 41 (78)
T ss_dssp HHHHHHHHHHHTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcChHHHHHHHHHHHHH
Confidence 344566666666666666666666554
No 363
>2cfu_A SDSA1; SDS-hydrolase, lactamase, hydrolase; HET: 1DB; 1.9A {Pseudomonas aeruginosa} SCOP: d.106.1.3 d.157.1.13 PDB: 2cfz_A* 2cg2_A 2cg3_A*
Probab=40.38 E-value=61 Score=33.76 Aligned_cols=51 Identities=20% Similarity=0.163 Sum_probs=44.3
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHH
Q psy4703 48 TCLKNRAAVYLKQNQNDKVIEDCSKSLEIVPDDPKALFRRCQAYEAIGKFE 98 (401)
Q Consensus 48 ~~~~n~a~~y~klg~y~~Ai~~~~kAL~ldP~~~kA~~~~a~a~~~lg~~e 98 (401)
.....+|...+..|+|.-|.+.++.++..+|+|..|...++.+|.++|.-.
T Consensus 450 ~~~~~~a~~~~~~g~~~wa~~l~~~~~~~~p~~~~a~~l~a~~~~~l~~~~ 500 (658)
T 2cfu_A 450 ERLLEQARASYARGEYRWVVEVVNRLVFAEPDNRAARELQADALEQLGYQA 500 (658)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHhc
Confidence 445667888889999999999999999999999999999999998887544
No 364
>3uzd_A 14-3-3 protein gamma; structural genomics, SGC, structural genomics consortium, MA alpha, phosphoserine, phosphothreonine; HET: SEP; 1.86A {Homo sapiens} PDB: 4e2e_A 2b05_A* 2c63_A* 2c74_A* 4dnk_A 4gnt_A 2bq0_A 2c23_A 2c1n_A* 2c1j_A* 2btp_A*
Probab=40.14 E-value=52 Score=29.94 Aligned_cols=48 Identities=17% Similarity=0.212 Sum_probs=24.0
Q ss_pred HHHHHHHHHHHhhc----CCCCcchHHHHHHHHHHHHH-cCCHHHHHHHHHHH
Q psy4703 26 ETALDFYTKALKVT----AEESHERATCLKNRAAVYLK-QNQNDKVIEDCSKS 73 (401)
Q Consensus 26 ~eAi~~y~~Al~l~----~p~~~~~~~~~~n~a~~y~k-lg~y~~Ai~~~~kA 73 (401)
+.|...|++|.++. +|.+|....+..|.+..|+. +++.++|.....+|
T Consensus 148 ~~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyYEIln~~~~Ac~lAk~A 200 (248)
T 3uzd_A 148 ESSEKAYSEAHEISKEHMQPTHPIRLGLALNYSVFYYEIQNAPEQACHLAKTA 200 (248)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 34555555554421 15555555555555555544 45555555544443
No 365
>1o9d_A 14-3-3-like protein C; protein-binding, fusicoccin, 14-3-3 family, activating drug; HET: TPO; 2.3A {Nicotiana tabacum} SCOP: a.118.7.1 PDB: 1o9c_A* 1o9e_A* 1o9f_A* 3e6y_A*
Probab=40.10 E-value=51 Score=30.21 Aligned_cols=48 Identities=19% Similarity=0.228 Sum_probs=27.1
Q ss_pred HHHHHHHHHHhhc----CCCCcchHHHHHHHHHHHHH-cCCHHHHHHHHHHHH
Q psy4703 27 TALDFYTKALKVT----AEESHERATCLKNRAAVYLK-QNQNDKVIEDCSKSL 74 (401)
Q Consensus 27 eAi~~y~~Al~l~----~p~~~~~~~~~~n~a~~y~k-lg~y~~Ai~~~~kAL 74 (401)
.|...|++|.++. +|.+|....+..|.+..|+. +++.++|+....+|+
T Consensus 153 ~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyYEiln~~~~Ac~lAk~Af 205 (260)
T 1o9d_A 153 STLTAYKAAQDIATTELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAF 205 (260)
T ss_dssp HHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHH
Confidence 4555666665432 15556666666666666554 466666666555543
No 366
>3myv_A SUSD superfamily protein; RAGB, SUSD and hypothetical proteins, structural genomics, J center for structural genomics, JCSG; HET: MSE; 1.80A {Bacteroides vulgatus}
Probab=38.50 E-value=70 Score=31.41 Aligned_cols=26 Identities=15% Similarity=0.036 Sum_probs=12.9
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHH
Q psy4703 83 ALFRRCQAYEAIGKFEEAYTDAKHIH 108 (401)
Q Consensus 83 A~~~~a~a~~~lg~~eeA~~~~~kal 108 (401)
|+..+|++|+.+|+|++|+..+++++
T Consensus 192 a~allarvyL~~~~~~~A~~~a~~vi 217 (454)
T 3myv_A 192 ARALLARIYLYHDDNRKAFDLADQLI 217 (454)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcccHHHHHHHHHHHH
Confidence 44444555555555555555555444
No 367
>3ubw_A 14-3-3E, 14-3-3 protein epsilon; adapter protein, signaling protein, signaling protein-protei complex; HET: SEP; 1.90A {Homo sapiens}
Probab=38.33 E-value=58 Score=29.89 Aligned_cols=47 Identities=17% Similarity=0.159 Sum_probs=23.4
Q ss_pred HHHHHHHHHHhhc----CCCCcchHHHHHHHHHHHHH-cCCHHHHHHHHHHH
Q psy4703 27 TALDFYTKALKVT----AEESHERATCLKNRAAVYLK-QNQNDKVIEDCSKS 73 (401)
Q Consensus 27 eAi~~y~~Al~l~----~p~~~~~~~~~~n~a~~y~k-lg~y~~Ai~~~~kA 73 (401)
.|...|++|.++. +|.+|....+..|.+..|+. +++.++|+....+|
T Consensus 174 ~a~~aY~~A~~iA~~~L~pThPirLGLaLNfSVFyYEIln~p~~Ac~LAk~A 225 (261)
T 3ubw_A 174 NSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAA 225 (261)
T ss_dssp HHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 3455555554431 14555555555555555544 45555555544443
No 368
>2npm_A 14-3-3 domain containing protein; cell regulator protein 14-3-3, struc genomics, structural genomics consortium, SGC, protein BIND; HET: SEP; 2.52A {Cryptosporidium parvum}
Probab=38.18 E-value=71 Score=29.26 Aligned_cols=48 Identities=19% Similarity=0.150 Sum_probs=26.1
Q ss_pred HHHHHHHHHHhhc---CCCCcchHHHHHHHHHHHHH-cCCHHHHHHHHHHHH
Q psy4703 27 TALDFYTKALKVT---AEESHERATCLKNRAAVYLK-QNQNDKVIEDCSKSL 74 (401)
Q Consensus 27 eAi~~y~~Al~l~---~p~~~~~~~~~~n~a~~y~k-lg~y~~Ai~~~~kAL 74 (401)
.|...|++|.++. +|.+|....+..|.+..|+. +++.++|+....+|+
T Consensus 174 ~a~~aY~~A~~iA~~L~pthPirLGLaLNfSVFyYEiln~~~~Ac~lAk~Af 225 (260)
T 2npm_A 174 DALKAYKDATVVAKDLEPTHPIRLGLALNFSVFHYEILNEPRAAIDMAKEAF 225 (260)
T ss_dssp HHHHHHHHHHHHHTTSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 4555566655431 15555555666666555554 556666655555543
No 369
>1wy6_A Hypothetical protein ST1625; helical repeat protein, structural genomics, unknown function; 2.20A {Sulfolobus tokodaii} SCOP: a.118.20.1
Probab=37.20 E-value=1.3e+02 Score=25.18 Aligned_cols=56 Identities=13% Similarity=0.004 Sum_probs=41.7
Q ss_pred HHHHcCCHHHHHHHHHHHHhhcCCCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Q psy4703 18 SAFKQGDYETALDFYTKALKVTAEESHERATCLKNRAAVYLKQNQNDKVIEDCSKSLEIV 77 (401)
Q Consensus 18 ~~~~~g~y~eAi~~y~~Al~l~~p~~~~~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~ld 77 (401)
.+..+|+-++--..+...+.-. +..+.++..+|.+|.+.|+-.+|.+...+|.+..
T Consensus 100 ~lv~~~KkDqLdki~~~~l~n~----~~~~~~l~kia~Ay~Klg~~r~a~eLl~~AC~kG 155 (172)
T 1wy6_A 100 ILVIQGKRDKLEEIGREILKNN----EVSASILVAIANALRRVGDERDATTLLIEACKKG 155 (172)
T ss_dssp HHHHTTCHHHHHHHHHHHC--C----CSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTT
T ss_pred HHHHhccHhHHHHHHHHHhccC----CCChHHHHHHHHHHHHhcchhhHHHHHHHHHHhh
Confidence 3455666666666666655544 2268999999999999999999999999998754
No 370
>3lew_A SUSD-like carbohydrate binding protein; structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 1PE 2PE; 1.70A {Bacteroides vulgatus}
Probab=36.12 E-value=78 Score=31.53 Aligned_cols=29 Identities=17% Similarity=0.003 Sum_probs=17.1
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Q psy4703 82 KALFRRCQAYEAIGKFEEAYTDAKHIHRV 110 (401)
Q Consensus 82 kA~~~~a~a~~~lg~~eeA~~~~~kal~l 110 (401)
-|+-.+|++|+.+++|++|+..+++++..
T Consensus 204 aA~allArvyL~~~~~~~A~~~a~~vi~~ 232 (495)
T 3lew_A 204 VVLGILSRACLYARQWEKAKTYSDKLLAK 232 (495)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHhc
Confidence 34555566666666666666666666543
No 371
>3kez_A Putative sugar binding protein; structural genomics, joint C structural genomics, JCSG, protein structure initiative; 1.90A {Bacteroides vulgatus atcc 8482}
Probab=36.04 E-value=77 Score=31.17 Aligned_cols=27 Identities=26% Similarity=0.308 Sum_probs=14.1
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHh
Q psy4703 83 ALFRRCQAYEAIGKFEEAYTDAKHIHR 109 (401)
Q Consensus 83 A~~~~a~a~~~lg~~eeA~~~~~kal~ 109 (401)
|+..+|++|+.+|+|++|+..+++++.
T Consensus 198 a~allArvyL~~~~~~~A~~~a~~vi~ 224 (461)
T 3kez_A 198 AMTLLSRVYLYKGEYNEALTMAENAIK 224 (461)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHh
Confidence 444455555555555555555555543
No 372
>2ijq_A Hypothetical protein; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.88A {Haloarcula marismortui} SCOP: a.246.2.1
Probab=35.84 E-value=1.7e+02 Score=24.70 Aligned_cols=59 Identities=3% Similarity=-0.091 Sum_probs=41.3
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCC------HHHHHH-HHHHH--HHcCCHHHHHHHHHHHHh
Q psy4703 51 KNRAAVYLKQNQNDKVIEDCSKSLEIVPDD------PKALFR-RCQAY--EAIGKFEEAYTDAKHIHR 109 (401)
Q Consensus 51 ~n~a~~y~klg~y~~Ai~~~~kAL~ldP~~------~kA~~~-~a~a~--~~lg~~eeA~~~~~kal~ 109 (401)
+..+..++..|+|-+|=+.++.+-...+.. .+++.+ +|.++ ...|+...|...+.+++.
T Consensus 36 ~~~~i~lFn~g~yfeaHEvLEe~W~~~~~~~~er~~lqGLIQ~lAvAl~H~~rgN~~GA~~ll~~Al~ 103 (161)
T 2ijq_A 36 VVHGVRLYNSGEFHESHDCFEDEWYNYGRGNTESKFLHGMVQVAAGAYKHFDFEDDDGMRSLFRTSLQ 103 (161)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHTTTTCSSSHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCchHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 446666777788888877777776665443 445555 54444 456899999999998876
No 373
>3mcx_A SUSD superfamily protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE GOL; 1.49A {Bacteroides thetaiotaomicron}
Probab=35.67 E-value=79 Score=31.21 Aligned_cols=28 Identities=21% Similarity=0.415 Sum_probs=15.9
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHh
Q psy4703 82 KALFRRCQAYEAIGKFEEAYTDAKHIHR 109 (401)
Q Consensus 82 kA~~~~a~a~~~lg~~eeA~~~~~kal~ 109 (401)
-|+-.+|++|+..|+|++|+..+++++.
T Consensus 203 aa~allarvyL~~~~~~~A~~~a~~vi~ 230 (477)
T 3mcx_A 203 AAQALLSRVYLNMGEYQKAYDAATDVIK 230 (477)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHh
Confidence 3455555556556666666665555554
No 374
>2guz_A Mitochondrial import inner membrane translocase subunit TIM14; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=35.20 E-value=97 Score=21.92 Aligned_cols=34 Identities=9% Similarity=0.078 Sum_probs=27.2
Q ss_pred HHHHHHhhcC--CCChhHHHHHHHHHHHhhhcchhh
Q psy4703 143 HNMFKYVFDT--SAPMDKRVTAVNNLVVLAREMSGA 176 (401)
Q Consensus 143 ~~~~~~~~~~--~~~~~~~~~a~~~L~~l~~~~~ga 176 (401)
.+.|+++... ..+.+.+..+++.|+..+|+|.+.
T Consensus 14 ~~~y~iLgl~~~~a~~~eIk~ayr~l~~~~HPDk~g 49 (71)
T 2guz_A 14 KEALQILNLTENTLTKKKLKEVHRKIMLANHPDKGG 49 (71)
T ss_dssp HHHHHHTTCCTTTCCHHHHHHHHHHHHHHHCGGGTC
T ss_pred HHHHHHcCCCCCCCCHHHHHHHHHHHHHHHCCCCCC
Confidence 3467777764 477889999999999999998754
No 375
>2ca5_A MXIH; transport protein, type III secretion system, needle complex, protein transport, virulence; 2.10A {Shigella flexneri} SCOP: a.2.20.1 PDB: 2v6l_0 3j0r_A
Probab=35.09 E-value=1.4e+02 Score=22.34 Aligned_cols=28 Identities=14% Similarity=0.103 Sum_probs=19.3
Q ss_pred CHHHHHHHHHHHHhhCCCCccHHHHHHH
Q psy4703 96 KFEEAYTDAKHIHRVEPTNKAIQPVLSR 123 (401)
Q Consensus 96 ~~eeA~~~~~kal~l~P~~~~~~~~L~~ 123 (401)
...+++....++++-+|+||.....+..
T Consensus 25 ~~~~~v~~Ai~~L~~~PsnPa~LAeyQ~ 52 (85)
T 2ca5_A 25 TLQGELTLALDKLAKNPSNPQLLAEYQS 52 (85)
T ss_dssp HHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCCHHHHHHHHH
Confidence 4556666677777889998887655543
No 376
>1faf_A Large T antigen; J domain, HPD motif, anti-parallel hairpin of helices, viral protein; NMR {Murine polyomavirus} SCOP: a.2.3.1
Probab=34.58 E-value=1.2e+02 Score=22.07 Aligned_cols=34 Identities=9% Similarity=0.113 Sum_probs=27.1
Q ss_pred HHHHHHhhc-CC--CChhHHHHHHHHHHHhhhcchhh
Q psy4703 143 HNMFKYVFD-TS--APMDKRVTAVNNLVVLAREMSGA 176 (401)
Q Consensus 143 ~~~~~~~~~-~~--~~~~~~~~a~~~L~~l~~~~~ga 176 (401)
.++|+++.. .. .+.+.+..+++.|....|+|.+.
T Consensus 11 ~~~y~iLgl~~~~~a~~~eIk~aYr~la~~~HPDk~~ 47 (79)
T 1faf_A 11 ERLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKGG 47 (79)
T ss_dssp HHHHHHHTCCSSSTTCHHHHHHHHHHHHHHSSGGGSC
T ss_pred HHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCC
Confidence 456787776 44 67888999999999999998753
No 377
>3iqu_A 14-3-3 protein sigma; signal transuction, nucleus, phosphoprotein, secreted, prote binding, signaling protein; HET: SEP; 1.05A {Homo sapiens} SCOP: a.118.7.1 PDB: 3iqj_A* 3iqv_A* 3mhr_A* 3lw1_A* 3o8i_A* 3p1n_A* 3p1o_A* 3t0l_A* 3t0m_A* 3u9x_A* 3ux0_A* 4dat_A* 4dau_A* 3p1s_A* 3p1r_A* 3smk_A* 3spr_A* 3p1q_A* 3p1p_A* 3sml_A* ...
Probab=33.10 E-value=80 Score=28.46 Aligned_cols=49 Identities=14% Similarity=0.196 Sum_probs=28.5
Q ss_pred HHHHHHHHHHHhhc----CCCCcchHHHHHHHHHHHHH-cCCHHHHHHHHHHHH
Q psy4703 26 ETALDFYTKALKVT----AEESHERATCLKNRAAVYLK-QNQNDKVIEDCSKSL 74 (401)
Q Consensus 26 ~eAi~~y~~Al~l~----~p~~~~~~~~~~n~a~~y~k-lg~y~~Ai~~~~kAL 74 (401)
+.|...|++|.++. +|.+|....+..|.+..|+. +++.++|.....+|+
T Consensus 150 e~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyyEiln~~~~Ac~lAk~Af 203 (236)
T 3iqu_A 150 DSARSAYQEAMDISKKEMPPTNPIRLGLALNFSVFHYEIANSPEEAISLAKTTF 203 (236)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 44566666665432 15666666666666666553 466666666555543
No 378
>3efz_A 14-3-3 protein; 14-3-3, cell regulation, structural genom structural genomics consortium, SGC; HET: SEP; 2.08A {Cryptosporidium parvum} SCOP: a.118.7.1 PDB: 2ijp_A*
Probab=33.00 E-value=64 Score=29.71 Aligned_cols=16 Identities=25% Similarity=0.196 Sum_probs=8.2
Q ss_pred cCCHHHHHHHHHHHHh
Q psy4703 94 IGKFEEAYTDAKHIHR 109 (401)
Q Consensus 94 lg~~eeA~~~~~kal~ 109 (401)
+++.++|....++|+.
T Consensus 210 ln~p~~Ac~lAk~AFd 225 (268)
T 3efz_A 210 LGNPEGAMKFANRAIQ 225 (268)
T ss_dssp TCCHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHh
Confidence 4555555555555543
No 379
>3ub0_A Non-structural protein 6, NSP6,; feline coronavirus, primer-independen polymerase, replication; 2.60A {Feline infectious peritonitis virus}
Probab=32.78 E-value=2.4e+02 Score=24.32 Aligned_cols=15 Identities=20% Similarity=0.428 Sum_probs=9.6
Q ss_pred HHHHHHHHHHHHhhC
Q psy4703 97 FEEAYTDAKHIHRVE 111 (401)
Q Consensus 97 ~eeA~~~~~kal~l~ 111 (401)
|+.|...|+++...+
T Consensus 19 YE~A~~~Ye~a~~ng 33 (199)
T 3ub0_A 19 YEKARADLEEAKKND 33 (199)
T ss_dssp HHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHhcC
Confidence 566666666666554
No 380
>3b2a_A TON_1937, putative uncharacterized protein; heat-repeats, hypothetical, unknown function; 2.20A {Thermococcus onnurineus}
Probab=32.77 E-value=2.9e+02 Score=25.17 Aligned_cols=105 Identities=13% Similarity=0.146 Sum_probs=56.8
Q ss_pred HHHHHHHHhhc--CCCChhHHHHHHHHHHHhhh-cchhhHHHhhhhHHHHHHHHhhccCchhHHhhHHHHH--HH-----
Q psy4703 141 KVHNMFKYVFD--TSAPMDKRVTAVNNLVVLAR-EMSGAEMLLKSGVAKQINTLLKCETNEEIYLGEEDFI--TS----- 210 (401)
Q Consensus 141 ~~~~~~~~~~~--~~~~~~~~~~a~~~L~~l~~-~~~gae~~~~e~~v~~L~~ll~~~~~~e~~lA~e~fi--~~----- 210 (401)
.+++.+..+.. ...+......+++|+-.+-. ..-.-+.+ ...+.-+..++. ++++=+ . .+.. .+
T Consensus 72 ~~e~~Ld~iI~llk~~dEkval~A~r~L~~LLe~vpL~~~~y--~Kl~~aL~dlik-~~~~il-~--~eaae~Lgklkv~ 145 (265)
T 3b2a_A 72 VLERHLDVFINALSQENEKVTIKALRALGYLVKDVPMGSKTF--LKAAKTLVSLLE-SPDDMM-R--IETIDVLSKLQPL 145 (265)
T ss_dssp HHHHHHHHHHHTCCSTTHHHHHHHHHHHHHHHTTCCBCHHHH--HHHHHHHHHHTT-SCCHHH-H--HHHHHHHHHCCBS
T ss_pred HHHHHHHHHHHHHhccchhHHHHHHHHHHHHHcCCCCCHHHH--HHHHHHHHHHhc-CCCchH-H--HHHHHHhCcCCcc
Confidence 45666666665 45555666777777643322 11111111 112344444444 333322 0 0000 11
Q ss_pred -HHHhcHHHHHHHHcCCChhHHHHHHHhhhhccccCCCCCCC
Q psy4703 211 -IIKQGVDILKRLYMSKNENIRVRALVGLCKLGSMGGSDASI 251 (401)
Q Consensus 211 -i~~~gv~~Lk~l~~s~~d~i~~ralvgLckl~~~gg~d~~~ 251 (401)
....-++||..+++|+|..++.-++-.|-.+++.+++..-.
T Consensus 146 ~~~~~V~~~l~sLl~Skd~~vK~agl~~L~eia~~S~D~~i~ 187 (265)
T 3b2a_A 146 EDSKLVRTYINELVVSPDLYTKVAGFCLFLNMLNSSADSGHL 187 (265)
T ss_dssp CCCHHHHHHHHHHHTCSSHHHHHHHHHHHHHHGGGCSSCCCG
T ss_pred cchHHHHHHHHHHHhCCChhHHHHHHHHHHHhhcccCCHHHH
Confidence 12234789999999999999998888887787765544433
No 381
>2ys8_A RAB-related GTP-binding protein RABJ; DNAJ domain, RAS-associated protein RAP1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=32.55 E-value=74 Score=23.73 Aligned_cols=49 Identities=22% Similarity=0.189 Sum_probs=34.4
Q ss_pred HHHHHHhhc-CCCChhHHHHHHHHHHHhhhcch----hhHHHhhhhHHHHHHHHhh
Q psy4703 143 HNMFKYVFD-TSAPMDKRVTAVNNLVVLAREMS----GAEMLLKSGVAKQINTLLK 193 (401)
Q Consensus 143 ~~~~~~~~~-~~~~~~~~~~a~~~L~~l~~~~~----gae~~~~e~~v~~L~~ll~ 193 (401)
.++|+++.. ...+.+.+..+++.|....|+|. +++..|.. +....+++.
T Consensus 27 ~~~y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~~~~f~~--i~~Ay~~L~ 80 (90)
T 2ys8_A 27 KDSWDMLGVKPGASRDEVNKAYRKLAVLLHPDKCVAPGSEDAFKA--VVNARTALL 80 (90)
T ss_dssp SSHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTTCCCTTHHHHHHH--HHHHHHHHH
T ss_pred CCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHH--HHHHHHHHC
Confidence 457888876 56778889999999999999975 34444444 444444443
No 382
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=32.16 E-value=1.7e+02 Score=32.49 Aligned_cols=70 Identities=10% Similarity=-0.110 Sum_probs=56.5
Q ss_pred chHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh----CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh--CCCC
Q psy4703 45 ERATCLKNRAAVYLKQNQNDKVIEDCSKSLEI----VPDDPKALFRRCQAYEAIGKFEEAYTDAKHIHRV--EPTN 114 (401)
Q Consensus 45 ~~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~l----dP~~~kA~~~~a~a~~~lg~~eeA~~~~~kal~l--~P~~ 114 (401)
.....|..+-.+|.+.|+.++|...+.+.-+. ..-+...|..+-..|.+.|++++|.+.|++..+. .|+-
T Consensus 125 ~~~~TynaLIdglcK~G~leeA~~Lf~eM~~m~~kG~~PdvvTYNtLI~Glck~G~~~eA~~Lf~eM~~~G~~PDv 200 (1134)
T 3spa_A 125 GQQQRLLAFFKCCLLTDQLPLAHHLLVVHHGQRQKRKLLTLDMYNAVMLGWARQGAFKELVYVLFMVKDAGLTPDL 200 (1134)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHSHHHHTTCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCCCCH
T ss_pred hHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhcCCCCCHhHHHHHHHHHHhCCCHHHHHHHHHHHHHcCCCCcH
Confidence 34556788888999999999999999765432 2347889999999999999999999999998753 5553
No 383
>1iur_A KIAA0730 protein; DNAJ like domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=32.02 E-value=1e+02 Score=23.06 Aligned_cols=33 Identities=12% Similarity=0.059 Sum_probs=26.1
Q ss_pred HHHHHHhhc-CCCChhHHHHHHHHHHHhhhcchh
Q psy4703 143 HNMFKYVFD-TSAPMDKRVTAVNNLVVLAREMSG 175 (401)
Q Consensus 143 ~~~~~~~~~-~~~~~~~~~~a~~~L~~l~~~~~g 175 (401)
.++|+++.. ...+.+.+..+++.|+..+|+|..
T Consensus 16 ~~~y~vLgv~~~as~~eIKkaYrkla~~~HPDk~ 49 (88)
T 1iur_A 16 KEVTSVVEQAWKLPESERKKIIRRLYLKWHPDKN 49 (88)
T ss_dssp HHHHHHHHHTTSSCSHHHHHHHHHHHHHTCTTTS
T ss_pred HHHHHHhCCCCCCCHHHHHHHHHHHHHHHCCCCC
Confidence 346777766 567788899999999999999753
No 384
>3t5v_B Nuclear mRNA export protein THP1; PCI, mRNA nuclear export, mRNA, nuclear, transcription; 2.90A {Saccharomyces cerevisiae}
Probab=31.05 E-value=80 Score=31.34 Aligned_cols=66 Identities=8% Similarity=0.045 Sum_probs=50.2
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHhhcC-CC-----CcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-CCCC
Q psy4703 15 SGNSAFKQGDYETALDFYTKALKVTA-EE-----SHERATCLKNRAAVYLKQNQNDKVIEDCSKSLEI-VPDD 80 (401)
Q Consensus 15 ~Gn~~~~~g~y~eAi~~y~~Al~l~~-p~-----~~~~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~l-dP~~ 80 (401)
.-..||+.|+..-+-..+...-.... |. ......+++.+|..++-.++|.+|-.++..|+.. .|..
T Consensus 182 L~kiYFkl~~~~lckni~k~i~~~~~~p~~~~~p~~q~v~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~lcp~~ 254 (455)
T 3t5v_B 182 LNNIYFRIESPQLCSNIFKNFQPKSMLAHFNEYQLDQQIEYRYLLGRYYLLNSQVHNAFVQFNEAFQSLLNLP 254 (455)
T ss_dssp HHHHHHHSSCCTTHHHHHHTHHHHCCCSCGGGSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHcCCHHHHHHHHHHhccCCCCcChhhCCccceEeeeHHHHHHHHHHccHHHHHHHHHHHHHhcCCcc
Confidence 34668899998888887754322220 11 1356788999999999999999999999999998 7755
No 385
>4fdd_A Transportin-1; heat repeats, karyopherin, nuclear import, protein transport importin, transportin, transport protein; 2.30A {Homo sapiens} PDB: 2ot8_A 2h4m_A 2z5k_A 2z5j_A 2qmr_A 2z5m_A 2z5n_A 2z5o_A 1qbk_B*
Probab=30.89 E-value=3.4e+02 Score=28.37 Aligned_cols=176 Identities=14% Similarity=0.050 Sum_probs=85.7
Q ss_pred CCChhHHHHHHHHHHHhhhcchhhHHHhhhhHHHHHHHHhhccCchhHHhh-HHHHH----------HHHHHhcHHHHHH
Q psy4703 153 SAPMDKRVTAVNNLVVLAREMSGAEMLLKSGVAKQINTLLKCETNEEIYLG-EEDFI----------TSIIKQGVDILKR 221 (401)
Q Consensus 153 ~~~~~~~~~a~~~L~~l~~~~~gae~~~~e~~v~~L~~ll~~~~~~e~~lA-~e~fi----------~~i~~~gv~~Lk~ 221 (401)
..+...|..+...+..................+..+..++. +.+++++.+ ++.+. ......-++.+-.
T Consensus 185 ~~~~~vR~~A~~aL~~~~~~~~~~~~~~~~~~l~~l~~~~~-d~~~~vr~~a~~~L~~l~~~~~~~~~~~l~~l~~~l~~ 263 (852)
T 4fdd_A 185 HSSPKIRSHAVACVNQFIISRTQALMLHIDSFIENLFALAG-DEEPEVRKNVCRALVMLLEVRMDRLLPHMHNIVEYMLQ 263 (852)
T ss_dssp CSSHHHHHHHHHHHHTTTTTTCHHHHTSHHHHHHHHHHHHT-CCCHHHHHHHHHHHHHHHHHCHHHHGGGHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHcC-CCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHH
Confidence 45566777777776543332211111111233455555555 556666432 22221 1112334555666
Q ss_pred HHcCCChhHHHHHHHhhhhccccCCCCCCCCCCCCCchHHHHHHHHhhhc-----------CCCCC---------chhHH
Q psy4703 222 LYMSKNENIRVRALVGLCKLGSMGGSDASIRPFADGSTRKLAEACRRFLV-----------NPARD---------PDIRR 281 (401)
Q Consensus 222 l~~s~~d~i~~ralvgLckl~~~gg~d~~~~~~~~~s~~~l~~~~~~~l~-----------~~~~~---------~~~~~ 281 (401)
+.++.++.++..|+-.+..++... ..+.+...-...|...+-..+. .+..| ...|+
T Consensus 264 ~~~~~~~~vr~~a~e~l~~l~~~~----~~~~~~~~~~~~l~p~ll~~l~~~e~d~~~~~~d~~ed~~~dd~~~~~~vr~ 339 (852)
T 4fdd_A 264 RTQDQDENVALEACEFWLTLAEQP----ICKDVLVRHLPKLIPVLVNGMKYSDIDIILLKGDVEGGSGGDDTISDWNLRK 339 (852)
T ss_dssp HHTCSSHHHHHHHHHHHHHHTTST----THHHHHTTTHHHHHHHHHHHTSCCHHHHHHHHC------------CCCCHHH
T ss_pred HccCCcHHHHHHHHHHHHHHhcch----hHHHHHHHHHHHHHHHHHHHcCCcHhHHHHhcCCcccccccccccccchHHH
Confidence 667777888887765555544321 0111111122345555544442 21111 12477
Q ss_pred hHHhhhhhccCCHHHHHhhcCCHHHHHHHHHHHhcCCCCcchhhhhhhHHhhcccCCc
Q psy4703 282 WAAEGLAYLTLDAEVKEALIEDKPALAALVDVASSVKYKNVWNGTQSDALKDVDKAFD 339 (401)
Q Consensus 282 ~~~eglay~~~~~~vke~~~~d~~~l~~l~~~~~~~~~~~~~~~~~~~~~~n~~~~~~ 339 (401)
-|++.|.+++--.. +.+. +..+..|.+.+.+. +..+..+++ .+|.++....+
T Consensus 340 ~a~~~L~~la~~~~--~~~~--~~l~~~l~~~l~~~-~~~~R~aa~-~alg~i~~~~~ 391 (852)
T 4fdd_A 340 CSAAALDVLANVYR--DELL--PHILPLLKELLFHH-EWVVKESGI-LVLGAIAEGCM 391 (852)
T ss_dssp HHHHHHHHHHHHHG--GGGH--HHHHHHHHHHHTCS-SHHHHHHHH-HHHHHTTTTTH
T ss_pred HHHHHHHHHHHhcc--HHHH--HHHHHHHHHHhcCC-CHHHHHHHH-HHHHHHHhcch
Confidence 78888888752211 1111 34556666666555 556777777 77777765443
No 386
>2ijq_A Hypothetical protein; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.88A {Haloarcula marismortui} SCOP: a.246.2.1
Probab=30.78 E-value=2.4e+02 Score=23.69 Aligned_cols=66 Identities=11% Similarity=0.126 Sum_probs=47.7
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhhcCCCC---cchHHHHHH-H--HHHHHHcCCHHHHHHHHHHHHHh
Q psy4703 10 NKLKESGNSAFKQGDYETALDFYTKALKVTAEES---HERATCLKN-R--AAVYLKQNQNDKVIEDCSKSLEI 76 (401)
Q Consensus 10 ~~l~~~Gn~~~~~g~y~eAi~~y~~Al~l~~p~~---~~~~~~~~n-~--a~~y~klg~y~~Ai~~~~kAL~l 76 (401)
..-+..|..+|..|+|=+|-+.++.+=... +.. ......+.. + |..+.+.|+...|...+.+++..
T Consensus 33 ~~~~~~~i~lFn~g~yfeaHEvLEe~W~~~-~~~~~er~~lqGLIQ~lAvAl~H~~rgN~~GA~~ll~~Al~~ 104 (161)
T 2ijq_A 33 RRAVVHGVRLYNSGEFHESHDCFEDEWYNY-GRGNTESKFLHGMVQVAAGAYKHFDFEDDDGMRSLFRTSLQY 104 (161)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHTTTT-CSSSHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHhCCCchHHHHHHHHHHHhc-CCCchHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 345778999999999999999999887665 431 112233333 3 33456679999999999999873
No 387
>3myv_A SUSD superfamily protein; RAGB, SUSD and hypothetical proteins, structural genomics, J center for structural genomics, JCSG; HET: MSE; 1.80A {Bacteroides vulgatus}
Probab=30.52 E-value=1.1e+02 Score=29.89 Aligned_cols=21 Identities=14% Similarity=0.306 Sum_probs=12.4
Q ss_pred cHHHHHHHHHHHHHHHHHHHH
Q psy4703 116 AIQPVLSRLFAIVTKRMQENE 136 (401)
Q Consensus 116 ~~~~~L~~l~~~~~~~~~a~~ 136 (401)
.+...+++++--.++..++..
T Consensus 191 aa~allarvyL~~~~~~~A~~ 211 (454)
T 3myv_A 191 AARALLARIYLYHDDNRKAFD 211 (454)
T ss_dssp HHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHHhcccHHHHHH
Confidence 355566666666665555544
No 388
>3lew_A SUSD-like carbohydrate binding protein; structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 1PE 2PE; 1.70A {Bacteroides vulgatus}
Probab=29.78 E-value=1.1e+02 Score=30.30 Aligned_cols=21 Identities=14% Similarity=0.162 Sum_probs=15.1
Q ss_pred cHHHHHHHHHHHHHHHHHHHH
Q psy4703 116 AIQPVLSRLFAIVTKRMQENE 136 (401)
Q Consensus 116 ~~~~~L~~l~~~~~~~~~a~~ 136 (401)
.+...+++++--.++..++..
T Consensus 204 aA~allArvyL~~~~~~~A~~ 224 (495)
T 3lew_A 204 VVLGILSRACLYARQWEKAKT 224 (495)
T ss_dssp HHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHHHhhhHHHHHH
Confidence 466778888887777766655
No 389
>2dl1_A Spartin; SPG20, MIT, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=29.69 E-value=64 Score=25.79 Aligned_cols=45 Identities=20% Similarity=0.207 Sum_probs=28.9
Q ss_pred CCHHHHHHHHHHHHhhcCCCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Q psy4703 23 GDYETALDFYTKALKVTAEESHERATCLKNRAAVYLKQNQNDKVIEDCSKSLEIVPD 79 (401)
Q Consensus 23 g~y~eAi~~y~~Al~l~~p~~~~~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~ldP~ 79 (401)
..|++|..+..+||.++ .. +.-...+.-|.+.|..+.++|.+..+
T Consensus 17 ~~h~~AF~~Is~AL~~D-E~-----------g~k~~Al~lYk~GI~eLe~Gl~I~~~ 61 (116)
T 2dl1_A 17 EAYKKAFLFVNKGLNTD-EL-----------GQKEEAKNYYKQGIGHLLRGISISSK 61 (116)
T ss_dssp HHHHHHHHHHHHHHHHH-HH-----------TCHHHHHHHHHHHHHHHHHHHSSCCC
T ss_pred HHHHHHHHHHHHHhhhh-hc-----------CCHHHHHHHHHHHHHHHHHhcccccc
Confidence 34788999999999998 21 11122223366667777777777653
No 390
>3kez_A Putative sugar binding protein; structural genomics, joint C structural genomics, JCSG, protein structure initiative; 1.90A {Bacteroides vulgatus atcc 8482}
Probab=28.52 E-value=1.2e+02 Score=29.81 Aligned_cols=21 Identities=19% Similarity=0.183 Sum_probs=14.5
Q ss_pred cHHHHHHHHHHHHHHHHHHHH
Q psy4703 116 AIQPVLSRLFAIVTKRMQENE 136 (401)
Q Consensus 116 ~~~~~L~~l~~~~~~~~~a~~ 136 (401)
.+...+++++--.++..++..
T Consensus 197 aa~allArvyL~~~~~~~A~~ 217 (461)
T 3kez_A 197 AAMTLLSRVYLYKGEYNEALT 217 (461)
T ss_dssp HHHHHHHHHHHHHTCHHHHHH
T ss_pred HHHHHHHHHHHHhCCHHHHHH
Confidence 466777787777777666655
No 391
>2rpa_A Katanin P60 ATPase-containing subunit A1; AAA ATPase, ATP-binding, cell cycle, cell division, cytoplas hydrolase, microtubule; NMR {Mus musculus}
Probab=27.29 E-value=52 Score=24.37 Aligned_cols=25 Identities=16% Similarity=0.088 Sum_probs=12.7
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHH
Q psy4703 51 KNRAAVYLKQNQNDKVIEDCSKSLE 75 (401)
Q Consensus 51 ~n~a~~y~klg~y~~Ai~~~~kAL~ 75 (401)
..+|.-|..+|+|+.|+.+|+.+++
T Consensus 16 ~k~ARe~Al~GnYdta~~yY~g~~~ 40 (78)
T 2rpa_A 16 VKLAREYALLGNYDSAMVYYQGVLD 40 (78)
T ss_dssp HHHHHHHHHHTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcChHHHHHHHHHHHH
Confidence 3344555555555555555554443
No 392
>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens}
Probab=25.83 E-value=1.6e+02 Score=24.11 Aligned_cols=32 Identities=9% Similarity=0.118 Sum_probs=26.0
Q ss_pred HHHHHhhc-CCCChhHHHHHHHHHHHhhhcchh
Q psy4703 144 NMFKYVFD-TSAPMDKRVTAVNNLVVLAREMSG 175 (401)
Q Consensus 144 ~~~~~~~~-~~~~~~~~~~a~~~L~~l~~~~~g 175 (401)
++|+++.. ...+.+.+.++++.|....|+|..
T Consensus 11 ~~y~iLgv~~~a~~~eIk~aYr~l~~~~HPDk~ 43 (155)
T 2l6l_A 11 DWYSILGADPSANISDLKQKYQKLILMYHPDKQ 43 (155)
T ss_dssp HHHHHHTCCTTCCHHHHHHHHHHHHHHHSCCCC
T ss_pred ChhHhcCCCCCCCHHHHHHHHHHHHHHHCcCCC
Confidence 57888877 556788899999999999998753
No 393
>3qnk_A Putative lipoprotein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG, protein structure initiative; 2.70A {Bacteroides fragilis}
Probab=25.80 E-value=1.4e+02 Score=29.82 Aligned_cols=30 Identities=7% Similarity=0.088 Sum_probs=25.0
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Q psy4703 81 PKALFRRCQAYEAIGKFEEAYTDAKHIHRV 110 (401)
Q Consensus 81 ~kA~~~~a~a~~~lg~~eeA~~~~~kal~l 110 (401)
.-|+-.+|++|+..++|++|+..+++++..
T Consensus 182 ~aA~allarv~L~~~~~~~A~~~a~~vi~~ 211 (517)
T 3qnk_A 182 GAAYALKSRVELYDKRYEDVIKSCAEVYKL 211 (517)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 457778889999999999999999988864
No 394
>3hdx_A SUSD homolog, SUSD superfamily protein; NP_809182.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides thetaiotaomicron vpi-5482}
Probab=25.57 E-value=1.5e+02 Score=29.12 Aligned_cols=31 Identities=6% Similarity=-0.041 Sum_probs=23.7
Q ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q psy4703 46 RATCLKNRAAVYLKQNQNDKVIEDCSKSLEI 76 (401)
Q Consensus 46 ~~~~~~n~a~~y~klg~y~~Ai~~~~kAL~l 76 (401)
...++..+|.+|+-+++|++|+..++++|..
T Consensus 196 k~aA~allarvyL~~~~~~~A~~~a~~vi~~ 226 (478)
T 3hdx_A 196 KLSAYSVLAHICAWQGNYAEAETYSAFIIDH 226 (478)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHHHhC
Confidence 4567777788888888888888888888764
No 395
>3mcx_A SUSD superfamily protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE GOL; 1.49A {Bacteroides thetaiotaomicron}
Probab=25.36 E-value=1.3e+02 Score=29.55 Aligned_cols=21 Identities=24% Similarity=0.349 Sum_probs=14.6
Q ss_pred cHHHHHHHHHHHHHHHHHHHH
Q psy4703 116 AIQPVLSRLFAIVTKRMQENE 136 (401)
Q Consensus 116 ~~~~~L~~l~~~~~~~~~a~~ 136 (401)
.+...+++++--.++..++..
T Consensus 203 aa~allarvyL~~~~~~~A~~ 223 (477)
T 3mcx_A 203 AAQALLSRVYLNMGEYQKAYD 223 (477)
T ss_dssp HHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHH
Confidence 466777888777777766655
No 396
>3snx_A SUSD homolog, putative SUSD-like carbohydrate binding protein; alpha-alpha superhelix, structural genomics; HET: MSE; 1.88A {Bacteroides thetaiotaomicron}
Probab=23.97 E-value=1.4e+02 Score=29.41 Aligned_cols=28 Identities=21% Similarity=0.165 Sum_probs=16.1
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHh
Q psy4703 82 KALFRRCQAYEAIGKFEEAYTDAKHIHR 109 (401)
Q Consensus 82 kA~~~~a~a~~~lg~~eeA~~~~~kal~ 109 (401)
-|+-.+|++|+.+++|++|...+++++.
T Consensus 192 aA~aLlARvyL~~~~~~~A~~~a~~vi~ 219 (460)
T 3snx_A 192 VVNGLMARAYLLTGQWGEAAKAAEAARK 219 (460)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHh
Confidence 3455556666666666666666655554
No 397
>2vgl_A Adaptor protein complex AP-2, alpha 2 subunit; cytoplasmic vesicle, alternative splicing, endocytosis, lipid-binding, golgi apparatus, adaptor, membrane, transport; HET: IHP; 2.59A {Rattus norvegicus} PDB: 2xa7_A 2jkr_A 2jkt_A
Probab=23.35 E-value=4.6e+02 Score=26.58 Aligned_cols=85 Identities=15% Similarity=0.187 Sum_probs=49.6
Q ss_pred HhcHHHHHHHHc-CCChhHHHHHHHhhhhccccCCCCCCCCCCCCCchHHHHHHHHhhhcCCCCCchhHHhHHhhhhhcc
Q psy4703 213 KQGVDILKRLYM-SKNENIRVRALVGLCKLGSMGGSDASIRPFADGSTRKLAEACRRFLVNPARDPDIRRWAAEGLAYLT 291 (401)
Q Consensus 213 ~~gv~~Lk~l~~-s~~d~i~~ralvgLckl~~~gg~d~~~~~~~~~s~~~l~~~~~~~l~~~~~~~~~~~~~~eglay~~ 291 (401)
......+-.+++ ..|..|+.+++-.|.++... .....+.+....|+.. .|.+.|+-+|..++-+.
T Consensus 367 ~~~~~~i~~~L~~d~d~~Ir~~aL~lL~~l~~~------------~Nv~~Iv~eL~~yl~~--~d~~~~~~~v~~I~~la 432 (621)
T 2vgl_A 367 KTHIETVINALKTERDVSVRQRAVDLLYAMCDR------------SNAQQIVAEMLSYLET--ADYSIREEIVLKVAILA 432 (621)
T ss_dssp HTTHHHHHHHHTTCCCHHHHHHHHHHHHHHCCH------------HHHHHHHHHHHHHHHH--CCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhccCCCHhHHHHHHHHHHHHcCh------------hhHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHH
Confidence 334445555566 66777888888888777643 1234566666667643 36667777776666553
Q ss_pred CCHHHHHhhcCC-HHHHHHHHHHHhcC
Q psy4703 292 LDAEVKEALIED-KPALAALVDVASSV 317 (401)
Q Consensus 292 ~~~~vke~~~~d-~~~l~~l~~~~~~~ 317 (401)
+.+..| .-.+.-|+++++..
T Consensus 433 ------~k~~~~~~~~v~~Ll~ll~~~ 453 (621)
T 2vgl_A 433 ------EKYAVDYTWYVDTILNLIRIA 453 (621)
T ss_dssp ------HHHCSSTHHHHHHHHHHHHHH
T ss_pred ------HhcCCcHHHHHHHHHHHHHhh
Confidence 233333 44555666665544
No 398
>3txs_A Terminase DNA packaging enzyme small subunit; helix, small terminase, viral protein; 1.81A {Aeromonas phage 44RR2} PDB: 3txq_A
Probab=22.84 E-value=37 Score=25.93 Aligned_cols=33 Identities=3% Similarity=-0.072 Sum_probs=26.3
Q ss_pred HHHHHHHHHhcCCCCcchhhhhhhHHhhcccCCc
Q psy4703 306 ALAALVDVASSVKYKNVWNGTQSDALKDVDKAFD 339 (401)
Q Consensus 306 ~l~~l~~~~~~~~~~~~~~~~~~~~~~n~~~~~~ 339 (401)
+.+-.+++|+.+ +++-.|-|+++.+-|+|+.-.
T Consensus 43 aa~~aLE~AknS-dsPR~~EVf~~lm~qmt~~~~ 75 (94)
T 3txs_A 43 MAKIALENAKNA-DSPRHVEVFAQLMGQMTTTNK 75 (94)
T ss_dssp HHHHHHHHHHHH-CCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcc-CCchHHHHHHHHHHHHHHHHH
Confidence 556778889999 999999998777778876554
No 399
>2pf4_E Small T antigen; PP2A, SV40, DNAJ, aalpha subunit, hydrolase regulat protein complex; 3.10A {Simian virus 40} PDB: 2pkg_C
Probab=21.86 E-value=39 Score=29.01 Aligned_cols=49 Identities=10% Similarity=-0.044 Sum_probs=31.1
Q ss_pred HHHHHHhhcCC-CC--hhHHHHHHHHHHHhhhcchhh-HHHhhhhHHHHHHHHhh
Q psy4703 143 HNMFKYVFDTS-AP--MDKRVTAVNNLVVLAREMSGA-EMLLKSGVAKQINTLLK 193 (401)
Q Consensus 143 ~~~~~~~~~~~-~~--~~~~~~a~~~L~~l~~~~~ga-e~~~~e~~v~~L~~ll~ 193 (401)
.++|+.+...+ .+ .+.+.++++.++...|+|.+. +..|+. ++...+++.
T Consensus 11 ~d~Y~vLGl~~~as~~~~eIKkAYRkLa~~~HPDk~~~~e~F~~--I~~AYevLs 63 (174)
T 2pf4_E 11 LQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGDEEKMKK--MNTLYKKME 63 (174)
T ss_dssp HHHHHTTTCCGGGTTCHHHHHHHHHHHGGGCSCC---CCTTTTH--HHHHHHHHH
T ss_pred ccHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCcCCCCCHHHHHH--HHHHHHHhC
Confidence 45788877733 33 488999999999999998754 223322 555555555
No 400
>2yhe_A SEC-alkyl sulfatase; hydrolase, inversion, metallo-beta-lactamase fold; 2.70A {Pseudomonas SP}
Probab=26.29 E-value=21 Score=37.49 Aligned_cols=49 Identities=16% Similarity=0.239 Sum_probs=25.4
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCccHHHHHHHHHHHHHHH
Q psy4703 83 ALFRRCQAYEAIGKFEEAYTDAKHIHRVEPTNKAIQPVLSRLFAIVTKR 131 (401)
Q Consensus 83 A~~~~a~a~~~lg~~eeA~~~~~kal~l~P~~~~~~~~L~~l~~~~~~~ 131 (401)
+...+|+..+..|+|.-|.+.+..++..+|+|.+++..++.+++.++..
T Consensus 463 ~~~~~a~~~~~~g~~~wa~~l~~~~~~a~p~~~~ar~l~a~~~~~l~~~ 511 (668)
T 2yhe_A 463 AVLKQMRAAIDKGDYRWAVQLGNHLVFADPANKDARALQADAMEQLGYQ 511 (668)
Confidence 3344444445555555555555555555555555555555555554443
No 401
>2p6v_A Transcription initiation factor TFIID subunit 4; alpha helix; HET: MLY; 2.00A {Homo sapiens} SCOP: a.277.1.1
Probab=20.42 E-value=1.2e+02 Score=24.02 Aligned_cols=60 Identities=15% Similarity=0.033 Sum_probs=44.5
Q ss_pred chHHHHHHHHhhhcC-----CC--CCc---hhHHhHHhhhhhccCCHHHHHhhcCCHHHHHHHHHHHhcCCCCcchhhhh
Q psy4703 258 STRKLAEACRRFLVN-----PA--RDP---DIRRWAAEGLAYLTLDAEVKEALIEDKPALAALVDVASSVKYKNVWNGTQ 327 (401)
Q Consensus 258 s~~~l~~~~~~~l~~-----~~--~~~---~~~~~~~eglay~~~~~~vke~~~~d~~~l~~l~~~~~~~~~~~~~~~~~ 327 (401)
.+.+-++.||+||.+ ++ ..+ +..+.-|.+|-+.++.|+ +|=.+|.+.+++. -++.+-+.+
T Consensus 14 e~~~nvkKck~FL~tLi~las~~~~spev~~~Vr~LVq~Ll~~~i~~E---------eFt~~Lq~~lns~-pqP~LvPFL 83 (114)
T 2p6v_A 14 ETMENVXXCXNFLSTLIXLASSGXQSTETAANVXELVQNLLDGXIEAE---------DFTSRLYRELNSS-PQPYLVPFL 83 (114)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTSSSSCHHHHHHHHHHHHHHHTTSSCHH---------HHHHHHHHHTTCC-CCTTHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhccccChHHHHHHHHHHHHHHHccCCHH---------HHHHHHHHHHcCC-CCcchHHHH
Confidence 456788899999976 22 333 346778999999988875 6788899999988 566555555
No 402
>3jq1_A SUSD superfamily protein; structural genomic center for structural genomics, JCSG, protein structure INI PSI-2, RAGB; HET: MSE; 1.55A {Bacteroides vulgatus atcc 8482}
Probab=20.04 E-value=1.3e+02 Score=29.69 Aligned_cols=27 Identities=15% Similarity=0.079 Sum_probs=15.8
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHH
Q psy4703 82 KALFRRCQAYEAIGKFEEAYTDAKHIH 108 (401)
Q Consensus 82 kA~~~~a~a~~~lg~~eeA~~~~~kal 108 (401)
-|+-.+|++|+..++|++|+..+++++
T Consensus 181 aA~allarvyL~~~~~~~A~~~a~~vi 207 (481)
T 3jq1_A 181 AAYAALGKIYVYEENWQEAINVLEPLT 207 (481)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHGGGG
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 345555666666666666666655554
Done!