BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy4705
(164 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q5RAP0|UN45A_PONAB Protein unc-45 homolog A OS=Pongo abelii GN=UNC45A PE=2 SV=1
Length = 929
Score = 117 bits (292), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 63/113 (55%), Positives = 78/113 (69%)
Query: 30 VESDNTRELLARILNALASQQELRGLMVQQGASKALIHLAHNGTVKGKRQAAQGLARLGI 89
V + + RELL+RI AL + E RG +V QG +ALI LA GT G+ +AAQ LA+L I
Sbjct: 643 VLTSSCRELLSRIFLALVEEVEDRGTVVAQGGGRALIPLALEGTDVGQTKAAQALAKLTI 702
Query: 90 TLNPEVAFPGERSLEVVRPLLSLLHPEATALETFEGLMALCNLAAIGEKQRQR 142
T NPE+ FPGER EVVRPL+SLLH + L+ FE LMAL NLA I E+ RQ+
Sbjct: 703 TSNPEMTFPGERIYEVVRPLVSLLHLNCSGLQNFEALMALTNLAGISERLRQK 755
>sp|Q32PZ3|UN45A_RAT Protein unc-45 homolog A OS=Rattus norvegicus GN=Unc45a PE=2 SV=1
Length = 944
Score = 117 bits (292), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 62/113 (54%), Positives = 79/113 (69%)
Query: 30 VESDNTRELLARILNALASQQELRGLMVQQGASKALIHLAHNGTVKGKRQAAQGLARLGI 89
V +++ RELL+R+ AL + E RG +V QG KAL+ LA GT G+ +AAQ LA+L I
Sbjct: 658 VLTNSCRELLSRVFLALVEEVEDRGTVVAQGGGKALLPLALEGTDVGQTKAAQALAKLTI 717
Query: 90 TLNPEVAFPGERSLEVVRPLLSLLHPEATALETFEGLMALCNLAAIGEKQRQR 142
T NPE+ FPGER EVVRPL+SLLH + L+ FE LMAL NLA I E+ RQ+
Sbjct: 718 TSNPEMTFPGERIYEVVRPLVSLLHLSCSGLQNFEALMALTNLAGISERLRQK 770
>sp|Q99KD5|UN45A_MOUSE Protein unc-45 homolog A OS=Mus musculus GN=Unc45a PE=1 SV=2
Length = 944
Score = 117 bits (292), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 62/113 (54%), Positives = 79/113 (69%)
Query: 30 VESDNTRELLARILNALASQQELRGLMVQQGASKALIHLAHNGTVKGKRQAAQGLARLGI 89
V +++ RELL+R+ AL + E RG +V QG KAL+ LA GT G+ +AAQ LA+L I
Sbjct: 658 VLTNSCRELLSRVFLALVEEVEDRGTVVAQGGGKALLPLALEGTDVGQTKAAQALAKLTI 717
Query: 90 TLNPEVAFPGERSLEVVRPLLSLLHPEATALETFEGLMALCNLAAIGEKQRQR 142
T NPE+ FPGER EVVRPL+SLLH + L+ FE LMAL NLA I E+ RQ+
Sbjct: 718 TSNPEMTFPGERIYEVVRPLVSLLHLSCSGLQNFEALMALTNLAGISERLRQK 770
>sp|Q9H3U1|UN45A_HUMAN Protein unc-45 homolog A OS=Homo sapiens GN=UNC45A PE=1 SV=1
Length = 944
Score = 116 bits (290), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 62/113 (54%), Positives = 78/113 (69%)
Query: 30 VESDNTRELLARILNALASQQELRGLMVQQGASKALIHLAHNGTVKGKRQAAQGLARLGI 89
V + + RELL+R+ AL + E RG +V QG +ALI LA GT G+ +AAQ LA+L I
Sbjct: 658 VLTSSCRELLSRVFLALVEEVEDRGTVVAQGGGRALIPLALEGTDVGQTKAAQALAKLTI 717
Query: 90 TLNPEVAFPGERSLEVVRPLLSLLHPEATALETFEGLMALCNLAAIGEKQRQR 142
T NPE+ FPGER EVVRPL+SLLH + L+ FE LMAL NLA I E+ RQ+
Sbjct: 718 TSNPEMTFPGERIYEVVRPLVSLLHLNCSGLQNFEALMALTNLAGISERLRQK 770
>sp|Q68F64|UN45B_XENLA Protein unc-45 homolog B OS=Xenopus laevis GN=unc45b PE=2 SV=1
Length = 927
Score = 109 bits (272), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 53/111 (47%), Positives = 76/111 (68%)
Query: 32 SDNTRELLARILNALASQQELRGLMVQQGASKALIHLAHNGTVKGKRQAAQGLARLGITL 91
+D T+E +AR+ AL + + RG++V QG KA+I LA GT GK +A+ GLA++
Sbjct: 641 TDQTKEQIARVFLALCDEPKDRGIIVAQGGGKAMIPLALEGTDVGKTKASHGLAKIAAVS 700
Query: 92 NPEVAFPGERSLEVVRPLLSLLHPEATALETFEGLMALCNLAAIGEKQRQR 142
NP++AFPGER EVVRPL+SLL+ E ++ FE L+AL NL+ +K RQ+
Sbjct: 701 NPDIAFPGERVYEVVRPLVSLLNTERDGVQNFEALLALTNLSGKSDKLRQK 751
>sp|Q6DGE9|UN45B_DANRE Protein unc-45 homolog B OS=Danio rerio GN=unc45b PE=1 SV=2
Length = 934
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 55/109 (50%), Positives = 72/109 (66%)
Query: 32 SDNTRELLARILNALASQQELRGLMVQQGASKALIHLAHNGTVKGKRQAAQGLARLGITL 91
+D T+E+LAR+ AL + RG++V QG KALI LA GT KGK +A+ LA++
Sbjct: 648 TDQTKEMLARVFLALTEDVKDRGIIVAQGGGKALIPLALEGTDKGKIKASHALAKIAAVS 707
Query: 92 NPEVAFPGERSLEVVRPLLSLLHPEATALETFEGLMALCNLAAIGEKQR 140
NPE+AFPGER EVVRPL+SLL + +E FE L L NLA + +K R
Sbjct: 708 NPEIAFPGERIYEVVRPLVSLLGTDRDGMENFEALRGLTNLAGLNDKLR 756
>sp|D7REX8|UN45B_XENTR Protein unc-45 homolog B OS=Xenopus tropicalis GN=unc45b PE=1 SV=1
Length = 927
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 53/111 (47%), Positives = 75/111 (67%)
Query: 32 SDNTRELLARILNALASQQELRGLMVQQGASKALIHLAHNGTVKGKRQAAQGLARLGITL 91
+D T+E L+R+ AL + RG++V QG KA+I LA GT GK +A+ GLA++
Sbjct: 641 TDQTKEQLSRVFLALCEDPKDRGIIVAQGGGKAMIPLALEGTDVGKIKASHGLAKIAAVS 700
Query: 92 NPEVAFPGERSLEVVRPLLSLLHPEATALETFEGLMALCNLAAIGEKQRQR 142
NP++AFPGER EVVRPL+SLL+ E ++ FE L+AL NL+ +K RQ+
Sbjct: 701 NPDIAFPGERVYEVVRPLVSLLNTERDGIQNFEALLALTNLSGKNDKLRQK 751
>sp|Q8CGY6|UN45B_MOUSE Protein unc-45 homolog B OS=Mus musculus GN=Unc45b PE=1 SV=1
Length = 931
Score = 107 bits (266), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 55/111 (49%), Positives = 73/111 (65%)
Query: 32 SDNTRELLARILNALASQQELRGLMVQQGASKALIHLAHNGTVKGKRQAAQGLARLGITL 91
+D T+ELLAR+ AL + RG +V QG KALI LA GT GK +AA GLA++
Sbjct: 646 TDQTKELLARVFLALCDNPKDRGTIVAQGGGKALIPLALEGTDVGKVKAAHGLAKIAAVS 705
Query: 92 NPEVAFPGERSLEVVRPLLSLLHPEATALETFEGLMALCNLAAIGEKQRQR 142
NP++AFPGER EVVRPL+SLL + L+ +E L+ L NL+ +K RQ+
Sbjct: 706 NPDIAFPGERVYEVVRPLVSLLDTQRDGLQNYEALLGLTNLSGRSDKLRQK 756
>sp|Q8IWX7|UN45B_HUMAN Protein unc-45 homolog B OS=Homo sapiens GN=UNC45B PE=2 SV=1
Length = 931
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/111 (47%), Positives = 71/111 (63%)
Query: 32 SDNTRELLARILNALASQQELRGLMVQQGASKALIHLAHNGTVKGKRQAAQGLARLGITL 91
+D T+ELLAR+ AL + RG +V QG KALI LA GT GK +AA LA++
Sbjct: 646 TDQTKELLARVFLALCDNPKDRGTIVAQGGGKALIPLALEGTDVGKVKAAHALAKIAAVS 705
Query: 92 NPEVAFPGERSLEVVRPLLSLLHPEATALETFEGLMALCNLAAIGEKQRQR 142
NP++AFPGER EVVRPL+ LL + L+ +E L+ L NL+ +K RQ+
Sbjct: 706 NPDIAFPGERVYEVVRPLVRLLDTQRDGLQNYEALLGLTNLSGRSDKLRQK 756
>sp|O74994|RNG3_SCHPO Ring assembly protein 3 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=rng3 PE=4 SV=1
Length = 746
Score = 41.6 bits (96), Expect = 0.002, Method: Composition-based stats.
Identities = 46/145 (31%), Positives = 69/145 (47%), Gaps = 13/145 (8%)
Query: 5 AATQTMTNMIVSEDVI-KIYEANKDKVESDNTRELLARILNALASQQELRGLMVQQGASK 63
A T+ I+ D++ K++ A K ++ LLA IL +A+ + R +VQ GA K
Sbjct: 434 APTERRIQKILEYDILSKLFSAAK---HYNSLNGLLAMILVHMANYKLARRKLVQIGALK 490
Query: 64 ALIHLAHNGTVKGKRQAAQGLARLGITLNPEV----AFPGERSLEVVRPLLSLLHPEA-- 117
L T AA LA++ I++ P AFP R++ + LLS +
Sbjct: 491 FLTRQCFIQTQDS--NAAFALAKILISVAPHSIFTKAFPSNRAIHPMSKLLSTNSADTEY 548
Query: 118 -TALETFEGLMALCNLAAIGEKQRQ 141
L FE L+AL NLA+ E+ RQ
Sbjct: 549 PILLGKFEVLLALTNLASHDEESRQ 573
>sp|Q8GWV5|PUB3_ARATH U-box domain-containing protein 3 OS=Arabidopsis thaliana GN=PUB3
PE=2 SV=2
Length = 760
Score = 37.4 bits (85), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 57/107 (53%), Gaps = 6/107 (5%)
Query: 32 SDNTRELLARILNALASQQELRGLMVQQGAS-KALIHLAHNGTVKGKRQAAQGLARLGIT 90
+D +E A L +L+ Q R + Q A+ +AL++L GT +GK+ AA L L IT
Sbjct: 568 NDRAKENSAASLFSLSVLQVNRERIGQSNAAIQALVNLLGKGTFRGKKDAASALFNLSIT 627
Query: 91 LNPEVAFPGERSLEVVRPLLSLLHPEATALETFEGLMALCNLAAIGE 137
+ + ++ V+ L+ LL P+ ++ L+A NL+A+GE
Sbjct: 628 HDNKARIVQAKA---VKYLVELLDPDLEMVDKAVALLA--NLSAVGE 669
>sp|Q9C9A6|PUB10_ARATH U-box domain-containing protein 10 OS=Arabidopsis thaliana GN=PUB10
PE=2 SV=1
Length = 628
Score = 35.4 bits (80), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 62/147 (42%), Gaps = 26/147 (17%)
Query: 7 TQTMTNMIVSEDVIKIYEANKD---------------KVESDNTRELLARILNALASQQE 51
T+T N + + IYE NK+ + S RE A L +L+ E
Sbjct: 398 TETQENAVTCILNLSIYEHNKELIMLAGAVTSIVLVLRAGSMEARENAAATLFSLSLADE 457
Query: 52 LRGLMVQQGASKALIHLAHNGTVKGKRQAAQGLARLGITLNPEVAFPGERSLEV----VR 107
+ ++ GA AL+ L G+V+GK+ AA L L I + G + V V+
Sbjct: 458 NKIIIGASGAIMALVDLLQYGSVRGKKDAATALFNLCI-------YQGNKGRAVRAGIVK 510
Query: 108 PLLSLLHPEATALETFEGLMALCNLAA 134
PL+ +L ++ E L L LA+
Sbjct: 511 PLVKMLTDSSSERMADEALTILSVLAS 537
>sp|Q8GUG9|PUB11_ARATH U-box domain-containing protein 11 OS=Arabidopsis thaliana GN=PUB11
PE=2 SV=2
Length = 612
Score = 34.7 bits (78), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 47/111 (42%), Gaps = 27/111 (24%)
Query: 6 ATQTMTNMIVSEDV------------IKIYEANKD---------------KVESDNTREL 38
A + N++ SEDV + IYE NK+ + + RE
Sbjct: 374 AIPVLVNLLTSEDVATQENAITCVLNLSIYENNKELIMFAGAVTSIVQVLRAGTMEAREN 433
Query: 39 LARILNALASQQELRGLMVQQGASKALIHLAHNGTVKGKRQAAQGLARLGI 89
A L +L+ E + ++ GA AL+ L NGT +GK+ AA L L I
Sbjct: 434 AAATLFSLSLADENKIIIGGSGAIPALVDLLENGTPRGKKDAATALFNLCI 484
>sp|O22193|PUB4_ARATH U-box domain-containing protein 4 OS=Arabidopsis thaliana GN=PUB4
PE=1 SV=3
Length = 826
Score = 33.9 bits (76), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 50/106 (47%), Gaps = 5/106 (4%)
Query: 32 SDNTRELLARILNALASQQELRGLMVQQGASKALIHLAHNGTVKGKRQAAQGLARLGITL 91
S +E A L +L+ +E + + Q GA L+ L NGT +GK+ AA L L I
Sbjct: 637 SSEAKENSAATLFSLSVIEENKIKIGQSGAIGPLVDLLGNGTPRGKKDAATALFNLSIHQ 696
Query: 92 NPEVAFPGERSLEVVRPLLSLLHPEATALETFEGLMALCNLAAIGE 137
+ + VR L+ L+ P A ++ + + L NLA I E
Sbjct: 697 ENKAMIVQSGA---VRYLIDLMDPAAGMVD--KAVAVLANLATIPE 737
>sp|E1C3P4|CBPC1_CHICK Cytosolic carboxypeptidase 1 OS=Gallus gallus GN=AGTPBP1 PE=3 SV=1
Length = 1224
Score = 32.7 bits (73), Expect = 1.0, Method: Composition-based stats.
Identities = 37/130 (28%), Positives = 62/130 (47%), Gaps = 12/130 (9%)
Query: 21 KIYEANKDKV--ESDNTRELLARILNALASQQELRGLMVQQGASKALIHLAHNGTVKGKR 78
++ + N D V E+DN R + A+IL+ + SQ++ + M +G+S + L+ T++ R
Sbjct: 23 QLEKINLDSVLGEADNARYVTAKILHLVQSQEKTKKEMTSKGSSAIEVILS---TLENTR 79
Query: 79 QAAQGLARLGITLNPEVAFPGERSLEVV-----RPLLSLLHPEATALETFEGLMALCN-- 131
L L I + G R+ +V + LL LL + E LM L +
Sbjct: 80 DPQTILNILSILIELVSVGGGRRASVLVTKGGTQILLQLLLNASKESPPNEELMVLLHTL 139
Query: 132 LAAIGEKQRQ 141
LA IG K ++
Sbjct: 140 LAKIGPKDKK 149
>sp|A9JRL3|CBPC1_XENTR Cytosolic carboxypeptidase 1 OS=Xenopus tropicalis GN=agtpbp1 PE=2
SV=1
Length = 1226
Score = 32.0 bits (71), Expect = 1.6, Method: Composition-based stats.
Identities = 33/119 (27%), Positives = 57/119 (47%), Gaps = 12/119 (10%)
Query: 31 ESDNTRELLARILNALASQQELRGLMVQQGASKALIHLAHNGTVKGKRQAAQGLARLGIT 90
+SDNTR + A+IL+ +Q++ R + +G++ + L T++ R L L I
Sbjct: 36 DSDNTRYVTAKILHLAQTQEKTRKEIAAKGSTGMEVILC---TLENTRDLQTILNILNI- 91
Query: 91 LNPEVAFPGERSLEVV------RPLLSLLHPEATALETFEGLMALCN--LAAIGEKQRQ 141
LN + G R + + R LL LL + + E LM + + LA +G K ++
Sbjct: 92 LNELASTAGGRRINALISKGGSRILLQLLLSASKESSSNEELMMVLHSLLAKVGPKDKK 150
>sp|Q5R629|ARMC9_PONAB LisH domain-containing protein ARMC9 OS=Pongo abelii GN=ARMC9 PE=2
SV=1
Length = 665
Score = 31.2 bits (69), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 6/57 (10%)
Query: 8 QTMTNMIVSEDVIKIYEANKDKV------ESDNTRELLARILNALASQQELRGLMVQ 58
+T+ +S D++ Y N+ V +SD R+ +AR++NA AS E R + Q
Sbjct: 354 ETVLQAYISNDLLDCYSHNQRSVLQLLHSKSDVVRQYMARLINAFASLAEGRLYLAQ 410
>sp|Q7Z3E5|ARMC9_HUMAN LisH domain-containing protein ARMC9 OS=Homo sapiens GN=ARMC9 PE=1
SV=2
Length = 817
Score = 31.2 bits (69), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 6/57 (10%)
Query: 8 QTMTNMIVSEDVIKIYEANKDKV------ESDNTRELLARILNALASQQELRGLMVQ 58
+T+ +S D++ Y N+ V SD R+ +AR++NA AS E R + Q
Sbjct: 354 ETVLQAYISNDLLDCYSHNQRSVLQLLHSTSDVVRQYMARLINAFASLAEGRLYLAQ 410
>sp|Q9SNC6|PUB13_ARATH U-box domain-containing protein 13 OS=Arabidopsis thaliana GN=PUB13
PE=1 SV=1
Length = 660
Score = 31.2 bits (69), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Query: 32 SDNTRELLARILNALASQQELRGLMVQQ-GASKALIHLAHNGTVKGKRQAAQGLARLG 88
S RE A +L L S + Q+ G LI LA NGT +GKR+AAQ L R+
Sbjct: 571 SPRNRENAAAVLVHLCSGDPQHLVEAQKLGLMGPLIDLAGNGTDRGKRKAAQLLERIS 628
>sp|O29118|ARGJ_ARCFU Arginine biosynthesis bifunctional protein ArgJ OS=Archaeoglobus
fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM
9628 / NBRC 100126) GN=argJ PE=3 SV=1
Length = 379
Score = 30.8 bits (68), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 33/70 (47%), Gaps = 9/70 (12%)
Query: 1 MLRRAATQTMTNMIV-----SEDVIKIYEANKDKVESDNTRELLARILNALASQQELRGL 55
MLRRAA +T + V + D + + K++VE D E L + ++A Q G
Sbjct: 190 MLRRAADKTFNRLTVDGDTSTNDTVLLISTGKERVERDVFEEELCSVFYSIAKQMARDG- 248
Query: 56 MVQQGASKAL 65
+GA+K
Sbjct: 249 ---EGATKVF 255
>sp|Q9ZV31|PUB12_ARATH U-box domain-containing protein 12 OS=Arabidopsis thaliana GN=PUB12
PE=2 SV=1
Length = 654
Score = 30.8 bits (68), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 18/29 (62%)
Query: 60 GASKALIHLAHNGTVKGKRQAAQGLARLG 88
G LI +A NGT +GKR+AAQ L R
Sbjct: 605 GIMDLLIEMAENGTDRGKRKAAQLLNRFS 633
>sp|Q3ASI0|FOLD_CHLCH Bifunctional protein FolD OS=Chlorobium chlorochromatii (strain
CaD3) GN=folD PE=3 SV=1
Length = 295
Score = 29.6 bits (65), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 14/70 (20%)
Query: 10 MTNMIVSED-VIKIYEANKDK-------------VESDNTRELLARILNALASQQELRGL 55
+T +IV ED ++Y NK K + +D T+E L +I+N L + + G+
Sbjct: 34 LTVIIVGEDPASQVYVRNKAKSCKEIGMNSTVIELPADTTQEHLLKIINDLNNDDTVHGI 93
Query: 56 MVQQGASKAL 65
+VQQ K +
Sbjct: 94 LVQQPMPKQI 103
>sp|Q9P275|UBP36_HUMAN Ubiquitin carboxyl-terminal hydrolase 36 OS=Homo sapiens GN=USP36
PE=1 SV=3
Length = 1121
Score = 29.6 bits (65), Expect = 9.8, Method: Composition-based stats.
Identities = 18/61 (29%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Query: 86 RLGITLNPEVAFPGERSLEVVRPLLSLLHPEATALE--TFEGLMALCNLAAIGEKQRQRK 143
R+G++ P V++ GER +VV+ LL +A + T++G M+ + AI + ++ R
Sbjct: 1004 RMGLSQAPPVSWNGERESDVVQELLKYSSDKAYGRKVLTWDGKMSAVSQDAIEDSRQART 1063
Query: 144 K 144
+
Sbjct: 1064 E 1064
>sp|O80866|ORP1A_ARATH Oxysterol-binding protein-related protein 1A OS=Arabidopsis
thaliana GN=ORP1A PE=2 SV=1
Length = 760
Score = 29.6 bits (65), Expect = 9.9, Method: Composition-based stats.
Identities = 28/94 (29%), Positives = 40/94 (42%), Gaps = 5/94 (5%)
Query: 55 LMVQQGASKALIHLAHNGTVKGKRQAAQGLARLGITLNPEVAFPGERSLEVVRPLLSLLH 114
+MV QG HL + + L R GITLN PG + E + P S L
Sbjct: 626 VMVDQGKVNE-SHLLWKRNKQPENPTKYNLTRFGITLNELT--PGLK--EKLPPTDSRLR 680
Query: 115 PEATALETFEGLMALCNLAAIGEKQRQRKKLNFR 148
P+ LE E M + ++QRQ +++ R
Sbjct: 681 PDQRYLEKGEYEMGNAEKLRLEQRQRQAREMQER 714
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.133 0.368
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 52,109,456
Number of Sequences: 539616
Number of extensions: 1848036
Number of successful extensions: 5663
Number of sequences better than 100.0: 35
Number of HSP's better than 100.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 5623
Number of HSP's gapped (non-prelim): 58
length of query: 164
length of database: 191,569,459
effective HSP length: 108
effective length of query: 56
effective length of database: 133,290,931
effective search space: 7464292136
effective search space used: 7464292136
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 56 (26.2 bits)