Query psy4705
Match_columns 164
No_of_seqs 116 out of 222
Neff 6.2
Searched_HMMs 29240
Date Fri Aug 16 23:46:15 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy4705.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/4705hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3opb_A SWI5-dependent HO expre 99.9 3.1E-27 1.1E-31 220.1 13.9 145 10-155 449-616 (778)
2 3now_A UNC-45 protein, SD10334 99.9 2.4E-22 8.3E-27 188.3 11.1 145 11-156 488-634 (810)
3 3tt9_A Plakophilin-2; cell adh 99.5 2.1E-13 7.2E-18 111.1 13.0 150 3-157 27-206 (233)
4 4db6_A Armadillo repeat protei 99.4 1.2E-12 4.1E-17 100.3 12.3 149 2-155 28-190 (210)
5 4db8_A Armadillo-repeat protei 99.4 5.8E-12 2E-16 98.8 13.7 150 2-156 28-191 (252)
6 4db8_A Armadillo-repeat protei 99.4 5.5E-12 1.9E-16 99.0 13.5 151 2-156 70-233 (252)
7 3nmw_A APC variant protein; AR 99.4 2.9E-12 9.8E-17 109.6 11.2 150 2-156 143-316 (354)
8 3l6x_A Catenin delta-1; cateni 99.4 7.2E-12 2.5E-16 113.9 13.7 150 2-156 64-246 (584)
9 3nmw_A APC variant protein; AR 99.4 6.3E-12 2.2E-16 107.4 12.2 152 2-156 100-274 (354)
10 1xm9_A Plakophilin 1; armadill 99.3 7.4E-12 2.5E-16 109.0 12.0 148 2-155 18-195 (457)
11 4hxt_A De novo protein OR329; 99.3 2.2E-11 7.6E-16 94.4 12.4 149 2-155 60-222 (252)
12 4hxt_A De novo protein OR329; 99.3 3.7E-11 1.3E-15 93.2 13.3 149 2-155 18-180 (252)
13 3ul1_B Importin subunit alpha- 99.3 5.3E-11 1.8E-15 104.6 14.3 151 2-156 117-285 (510)
14 3nmz_A APC variant protein; pr 99.3 1.3E-11 4.4E-16 109.1 10.2 149 2-155 259-431 (458)
15 3nmz_A APC variant protein; pr 99.3 2.4E-11 8.3E-16 107.3 11.8 152 2-156 216-390 (458)
16 1xqr_A HSPBP1 protein; armadil 99.3 1.7E-11 5.8E-16 102.5 9.9 138 14-156 77-220 (296)
17 3tpo_A Importin subunit alpha- 99.3 6E-11 2.1E-15 104.4 13.7 151 2-156 136-304 (529)
18 3tt9_A Plakophilin-2; cell adh 99.2 9.9E-12 3.4E-16 101.2 6.5 131 19-154 9-144 (233)
19 4db6_A Armadillo repeat protei 99.2 1.5E-10 5.1E-15 88.6 10.8 134 17-155 11-148 (210)
20 1jdh_A Beta-catenin; beta-cate 99.1 4.6E-10 1.6E-14 96.2 12.6 149 2-155 33-195 (529)
21 2jdq_A Importin alpha-1 subuni 99.1 3.2E-09 1.1E-13 89.0 17.1 150 2-155 81-244 (450)
22 3l6x_A Catenin delta-1; cateni 99.1 1.1E-10 3.8E-15 106.1 8.5 133 17-154 47-183 (584)
23 4b8j_A Importin subunit alpha- 99.1 1.2E-09 4E-14 94.9 14.4 149 2-155 134-296 (528)
24 1xm9_A Plakophilin 1; armadill 99.1 9.8E-11 3.3E-15 101.9 7.5 130 19-154 3-136 (457)
25 1wa5_B Importin alpha subunit; 99.1 1.5E-09 5.2E-14 94.6 14.7 150 2-155 147-309 (530)
26 2z6h_A Catenin beta-1, beta-ca 99.1 1.1E-09 3.8E-14 98.2 13.1 149 2-155 30-192 (644)
27 3now_A UNC-45 protein, SD10334 99.0 5.7E-10 2E-14 104.8 9.3 146 4-155 599-760 (810)
28 3tpo_A Importin subunit alpha- 99.0 9.3E-10 3.2E-14 96.8 9.3 150 2-155 267-430 (529)
29 2z6g_A B-catenin; FULL-length, 99.0 3.2E-09 1.1E-13 98.2 12.9 149 2-155 166-328 (780)
30 1xqr_A HSPBP1 protein; armadil 99.0 3.4E-09 1.2E-13 88.5 10.9 131 2-138 98-242 (296)
31 1jdh_A Beta-catenin; beta-cate 98.9 2.4E-08 8.3E-13 85.5 14.8 146 3-155 160-318 (529)
32 2jdq_A Importin alpha-1 subuni 98.9 2.3E-08 7.8E-13 83.8 13.5 150 2-155 166-328 (450)
33 2z6h_A Catenin beta-1, beta-ca 98.9 2.5E-08 8.4E-13 89.4 14.3 147 2-155 156-315 (644)
34 4b8j_A Importin subunit alpha- 98.9 1.5E-08 5E-13 88.0 12.4 151 2-155 219-381 (528)
35 2z6g_A B-catenin; FULL-length, 98.9 3E-08 1E-12 91.7 15.1 146 3-155 293-451 (780)
36 3ul1_B Importin subunit alpha- 98.9 2.1E-08 7.1E-13 88.0 12.6 149 3-155 207-368 (510)
37 1wa5_B Importin alpha subunit; 98.8 6.9E-08 2.4E-12 84.1 13.4 150 2-155 231-393 (530)
38 3opb_A SWI5-dependent HO expre 98.6 2E-07 7E-12 87.2 11.6 150 2-155 517-707 (778)
39 4gmo_A Putative uncharacterize 97.7 2.1E-05 7.2E-10 71.8 4.1 136 17-155 34-192 (684)
40 3ltm_A Alpha-REP4; protein eng 97.6 0.0031 1.1E-07 47.7 14.1 44 2-47 35-78 (211)
41 3ltj_A Alpharep-4; protein eng 97.5 0.0042 1.4E-07 46.6 14.2 44 2-47 30-73 (201)
42 1oyz_A Hypothetical protein YI 97.5 0.0018 6.1E-08 51.2 12.5 109 2-133 107-220 (280)
43 3ltj_A Alpharep-4; protein eng 97.4 0.0017 5.7E-08 48.9 10.8 106 2-133 61-166 (201)
44 3ltm_A Alpha-REP4; protein eng 97.4 0.0036 1.2E-07 47.3 12.6 105 3-133 67-171 (211)
45 1oyz_A Hypothetical protein YI 97.2 0.0075 2.6E-07 47.6 13.1 46 2-49 39-84 (280)
46 1te4_A Conserved protein MTH18 97.1 0.00041 1.4E-08 49.7 4.0 103 3-132 29-131 (131)
47 3grl_A General vesicular trans 97.1 0.0017 5.7E-08 59.8 8.6 142 3-148 39-209 (651)
48 4gmo_A Putative uncharacterize 96.2 0.011 3.6E-07 53.9 7.5 145 2-148 50-228 (684)
49 4fdd_A Transportin-1; heat rep 96.1 0.014 4.8E-07 53.3 8.0 129 2-134 337-471 (852)
50 2vgl_B AP-2 complex subunit be 95.1 0.088 3E-06 46.6 9.1 89 2-94 102-193 (591)
51 2qk2_A LP04448P; mini spindles 95.0 0.2 7E-06 38.7 9.9 123 2-133 73-204 (242)
52 1te4_A Conserved protein MTH18 95.0 0.039 1.3E-06 39.1 5.2 74 2-87 58-131 (131)
53 4fdd_A Transportin-1; heat rep 94.8 0.23 7.9E-06 45.3 10.9 127 2-137 231-391 (852)
54 1b3u_A Protein (protein phosph 94.2 0.16 5.5E-06 43.2 8.2 122 2-133 103-231 (588)
55 3grl_A General vesicular trans 94.1 0.28 9.7E-06 45.1 10.0 130 15-148 119-255 (651)
56 1b3u_A Protein (protein phosph 94.1 0.39 1.3E-05 40.7 10.3 45 3-48 419-470 (588)
57 2qk2_A LP04448P; mini spindles 94.1 0.6 2.1E-05 35.9 10.6 119 2-131 31-159 (242)
58 1qgr_A Protein (importin beta 94.0 0.42 1.4E-05 42.8 10.8 128 2-134 344-479 (876)
59 2vgl_B AP-2 complex subunit be 93.8 0.12 4.2E-06 45.7 6.9 124 1-133 136-267 (591)
60 1u6g_C TIP120 protein, CAND1; 92.8 0.39 1.3E-05 45.6 8.9 128 2-133 22-162 (1230)
61 2qk1_A Protein STU2; STU2P, XM 91.3 1.8 6.2E-05 34.1 10.0 125 3-133 33-174 (249)
62 1ibr_B P95, importin beta-1 su 90.9 0.69 2.3E-05 37.9 7.3 125 2-133 17-158 (462)
63 2bpt_A Importin beta-1 subunit 89.4 2.4 8.3E-05 37.7 10.1 111 2-114 347-464 (861)
64 1ibr_B P95, importin beta-1 su 89.3 2.6 9E-05 34.3 9.6 95 34-134 343-437 (462)
65 3b2a_A TON_1937, putative unch 89.0 2.3 8E-05 34.9 8.8 86 42-137 79-182 (265)
66 1u6g_C TIP120 protein, CAND1; 86.8 5.2 0.00018 37.9 11.1 130 2-136 64-206 (1230)
67 2bpt_A Importin beta-1 subunit 85.6 7.2 0.00025 34.7 10.9 126 2-133 21-163 (861)
68 3b2a_A TON_1937, putative unch 84.5 6.3 0.00022 32.3 9.1 116 6-135 95-219 (265)
69 1w63_A Adapter-related protein 84.3 4.9 0.00017 35.6 9.2 98 27-138 115-212 (618)
70 1qgr_A Protein (importin beta 83.8 5.3 0.00018 35.6 9.2 125 2-133 17-158 (876)
71 1w63_A Adapter-related protein 83.7 2.8 9.7E-05 37.2 7.3 99 2-114 329-432 (618)
72 3ebb_A Phospholipase A2-activa 79.1 18 0.0006 29.8 10.1 115 30-148 159-277 (304)
73 2db0_A 253AA long hypothetical 74.7 31 0.0011 27.6 11.0 40 105-145 182-221 (253)
74 2qk1_A Protein STU2; STU2P, XM 72.5 24 0.00083 27.5 9.0 88 3-91 121-222 (249)
75 4ady_A RPN2, 26S proteasome re 71.6 42 0.0014 32.2 11.7 15 76-90 594-608 (963)
76 3tjz_B Coatomer subunit gamma; 69.3 17 0.00058 30.6 7.8 47 2-49 120-169 (355)
77 3dad_A FH1/FH2 domain-containi 61.1 32 0.0011 29.0 7.9 61 30-90 129-190 (339)
78 4ady_A RPN2, 26S proteasome re 61.0 24 0.00082 33.9 7.8 122 2-132 594-717 (963)
79 2vgl_A Adaptor protein complex 48.9 54 0.0018 29.1 7.7 55 30-90 380-434 (621)
80 2vgl_A Adaptor protein complex 38.1 91 0.0031 27.6 7.4 97 28-136 120-218 (621)
81 2iw3_A Elongation factor 3A; a 29.5 2.3E+02 0.0079 27.1 9.0 120 3-133 31-162 (986)
82 4atg_A TAF6; transcription, TF 27.9 2E+02 0.0069 22.1 7.0 138 2-144 24-170 (196)
83 2fv2_A RCD1 required for cell 26.5 1.4E+02 0.0046 24.4 5.9 59 33-91 116-176 (268)
84 2jpq_A UPF0352 protein VP2129; 23.8 46 0.0016 22.5 2.2 26 124-149 32-63 (83)
85 2juw_A UPF0352 protein SO_2176 23.3 48 0.0016 22.3 2.2 25 124-148 32-62 (80)
86 2juz_A UPF0352 protein HI0840; 20.4 47 0.0016 22.3 1.7 24 125-148 33-62 (80)
No 1
>3opb_A SWI5-dependent HO expression protein 4; heat and arm fold, myosin folding and function, myosin bindi protein, protein binding; 2.90A {Saccharomyces cerevisiae}
Probab=99.94 E-value=3.1e-27 Score=220.08 Aligned_cols=145 Identities=21% Similarity=0.263 Sum_probs=129.1
Q ss_pred HHHHhcChhHHHHHHHhhcccCCHHHHHHHHHHHHHhccchhhHHHHHhcChHHHHHHHhhccchh---hhhHHHHHHHH
Q psy4705 10 MTNMIVSEDVIKIYEANKDKVESDNTRELLARILNALASQQELRGLMVQQGASKALIHLAHNGTVK---GKRQAAQGLAR 86 (164)
Q Consensus 10 l~nli~~~~vi~~l~v~l~k~~S~~~k~~~~~il~~Ls~~~~~R~~ivqqGai~~Ll~l~~~gt~~---~~~~A~~ALak 86 (164)
.|..+...|++|.| +.+.+++|+++|++++++|++||.++++|+.++||||+++|+++..++++. .|..|++||||
T Consensus 449 ~~~~l~eaGvIp~L-v~Ll~S~s~~~re~A~~aL~nLS~d~~~R~~lvqqGal~~LL~lL~s~~~~~~~~k~~AA~ALAr 527 (778)
T 3opb_A 449 NEKYILRTELISFL-KREMHNLSPNCKQQVVRIIYNITRSKNFIPQLAQQGAVKIILEYLANKQDIGEPIRILGCRALTR 527 (778)
T ss_dssp HHHHTTTTTHHHHH-HHHGGGSCHHHHHHHHHHHHHHHTSGGGHHHHHHTTHHHHHHHHTTCC---CCHHHHHHHHHHHH
T ss_pred HHHHHHHCcCHHHH-HHHHcCCCHHHHHHHHHHHHHHcCCHHHHHHHHHCCCHHHHHHHHhcCCCcchHHHHHHHHHHHH
Confidence 67889999999999 899999999999999999999999999999999999999999998887654 78999999999
Q ss_pred HhCcCCCCcccCCCCcccchHHHHhccCC--C-----------cchHHHHHHHHHHHcccCCC----hHHHHHHHhc--c
Q psy4705 87 LGITLNPEVAFPGERSLEVVRPLLSLLHP--E-----------ATALETFEGLMALCNLAAIG----EKQRQRKKLN--F 147 (164)
Q Consensus 87 LlIs~nP~l~f~~~~~~~av~pL~~LL~~--~-----------~~~l~~fEaLlALTNLAs~~----~~~r~~Iv~~--~ 147 (164)
|+|++||.++|+|+.+.++||||++||++ + .+.+|+|||++||||||+.+ ++.|++|+++ +
T Consensus 528 Llis~np~~~f~~~~~~~aI~pLv~LL~~~~~~~~~~l~~~~~~~~l~~feAL~ALTNLAs~~~n~~E~~r~~Ii~~~ga 607 (778)
T 3opb_A 528 MLIFTNPGLIFKKYSALNAIPFLFELLPRSTPVDDNPLHNDEQIKLTDNYEALLALTNLASSETSDGEEVCKHIVSTKVY 607 (778)
T ss_dssp HHHTSCHHHHSSSSCSTTHHHHHHHTSCCSSSCSSCC---CCCCCHHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHSHHH
T ss_pred HHhcCCHHHHcCCCccccchHHHHHHcCCCCCcccccccccccccHHHHHHHHHHHHHHhcCCcccchHHHHHHHHhcCH
Confidence 99999999999998888999999999983 3 23488999999999999997 4689999996 7
Q ss_pred ch-hHhhhh
Q psy4705 148 RP-FVSCLG 155 (164)
Q Consensus 148 ~~-~~~~l~ 155 (164)
|+ ++++|.
T Consensus 608 ~~~L~~LL~ 616 (778)
T 3opb_A 608 WSTIENLML 616 (778)
T ss_dssp HHHHHHGGG
T ss_pred HHHHHHHHh
Confidence 76 666665
No 2
>3now_A UNC-45 protein, SD10334P; armadillo repeat, HSP90, myosin, tetra-tricopeptide repeat, binding protein required for myosin function; 2.99A {Drosophila melanogaster}
Probab=99.87 E-value=2.4e-22 Score=188.34 Aligned_cols=145 Identities=49% Similarity=0.720 Sum_probs=133.6
Q ss_pred HHHhcChhHHHHHHHhhcccCCHHHHHHHHHHHHHhccchhhHHHHHhcChHHHHHHHhhccchhhhhHHHHHHHHHhCc
Q psy4705 11 TNMIVSEDVIKIYEANKDKVESDNTRELLARILNALASQQELRGLMVQQGASKALIHLAHNGTVKGKRQAAQGLARLGIT 90 (164)
Q Consensus 11 ~nli~~~~vi~~l~v~l~k~~S~~~k~~~~~il~~Ls~~~~~R~~ivqqGai~~Ll~l~~~gt~~~~~~A~~ALakLlIs 90 (164)
+..++..|++|.| +.+.+++++.+|++++++|.|+|.++++|..++++|++++|+.+.+++++..+..|++||++|+++
T Consensus 488 ~~~VveaGaVp~L-V~LL~s~s~~vqe~Aa~aL~NLA~d~~~r~~Vv~~Gaip~Lv~LL~s~~~~~k~~Aa~AL~nL~~~ 566 (810)
T 3now_A 488 ITVLANEGITTAL-CALAKTESHNSQELIARVLNAVCGLKELRGKVVQEGGVKALLRMALEGTEKGKRHATQALARIGIT 566 (810)
T ss_dssp HHHHHHTTHHHHH-HHHHTCCCHHHHHHHHHHHHHHHTSHHHHHHHHHTTHHHHHHHHHHSSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHCcCHHHH-HHHHcCCCHHHHHHHHHHHHHHcCCHHHHHHHHHCCCHHHHHHHHccCCHHHHHHHHHHHHHHhcC
Confidence 3567788999999 899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcccCCCCcccchHHHHhccCCCcchHHHHHHHHHHHcccCCChHHHHHHHhccc-h-hHhhhhc
Q psy4705 91 LNPEVAFPGERSLEVVRPLLSLLHPEATALETFEGLMALCNLAAIGEKQRQRKKLNFR-P-FVSCLGG 156 (164)
Q Consensus 91 ~nP~l~f~~~~~~~av~pL~~LL~~~~~~l~~fEaLlALTNLAs~~~~~r~~Iv~~~~-~-~~~~l~~ 156 (164)
+||...|+++...++||||+.||+++.+.+++|||+.||+||++.+++.+++|+++|+ + ++++|..
T Consensus 567 ~~p~~~~~~~~~~~aIppLv~LL~~~~~~l~~~eAl~AL~NLa~~~d~~~~~Ii~aG~l~~Lv~LL~s 634 (810)
T 3now_A 567 INPEVSFSGQRSLDVIRPLLNLLQQDCTALENFESLMALTNLASMNESVRQRIIKEQGVSKIEYYLME 634 (810)
T ss_dssp SCHHHHTTTHHHHHTHHHHHHTTSTTSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHHHS
T ss_pred CChhhhhcchhhhcHHHHHHHHhCCCCcHHHHHHHHHHHHHHhcCCHHHHHHHHHcCCHHHHHHHHcC
Confidence 9999999886667899999999997678899999999999999999999999999866 3 7777764
No 3
>3tt9_A Plakophilin-2; cell adhesion; 1.55A {Homo sapiens}
Probab=99.51 E-value=2.1e-13 Score=111.15 Aligned_cols=150 Identities=15% Similarity=0.098 Sum_probs=118.2
Q ss_pred hHHHHHHHHHH----------hcChhHHHHHHHhhcccCCHHHHHHHHHHHHHhcc-chhhHHHHHhcChHHHHHHHhh-
Q psy4705 3 RRAATQTMTNM----------IVSEDVIKIYEANKDKVESDNTRELLARILNALAS-QQELRGLMVQQGASKALIHLAH- 70 (164)
Q Consensus 3 ~~aa~~~l~nl----------i~~~~vi~~l~v~l~k~~S~~~k~~~~~il~~Ls~-~~~~R~~ivqqGai~~Ll~l~~- 70 (164)
+..|+.++.|+ +...|+||+| +.+.+++++.+++.++..|.+|+. ++++|..|++.||+++|+.+.+
T Consensus 27 q~~Aa~~l~~L~~~~~~~r~~I~~~G~Ip~L-V~lL~s~~~~vq~~Aa~aL~nLa~~~~~nk~~I~~~GaI~~Lv~lL~~ 105 (233)
T 3tt9_A 27 ISAAATFIQHECFQKSEARKRVNQLRGILKL-LQLLKVQNEDVQRAVCGALRNLVFEDNDNKLEVAELNGVPRLLQVLKQ 105 (233)
T ss_dssp HHHHHHHHHHHHHHCHHHHHHHHHTTHHHHH-HHGGGCCCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCcHHHHHHHHcCCHHHH-HHHHcCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHcCCHHHHHHHHcc
Confidence 45667777777 5567889998 899999999999999999999998 5899999999999999999887
Q ss_pred ccchhhhhHHHHHHHHHhCcCCCCcccCCCCcccchHHHHhccC-C-----C---------cchHHHHHHHHHHHcccCC
Q psy4705 71 NGTVKGKRQAAQGLARLGITLNPEVAFPGERSLEVVRPLLSLLH-P-----E---------ATALETFEGLMALCNLAAI 135 (164)
Q Consensus 71 ~gt~~~~~~A~~ALakLlIs~nP~l~f~~~~~~~av~pL~~LL~-~-----~---------~~~l~~fEaLlALTNLAs~ 135 (164)
.+....+..|+.+|.+|.........+ ..++||||+.++- | + .+..=.+.|.-+|-||++.
T Consensus 106 ~~~~~~~e~a~~aL~nLS~~~~~k~~i----~~~~i~~Lv~ll~~p~sG~~~~~~~~~~~~~~~~v~~na~~~L~nLss~ 181 (233)
T 3tt9_A 106 TRDLETKKQITGLLWNLSSNDKLKNLM----ITEALLTLTENIIIPFSGWPEGDYPKANGLLDFDIFYNVTGCLRNMSSA 181 (233)
T ss_dssp CCCHHHHHHHHHHHHHHHTSGGGHHHH----HHHHHHHHCCCCCHHHHCCCGGGCCCCCTTCCHHHHHHHHHHHHHHTTS
T ss_pred CCCHHHHHHHHHHHHHHHcChhhHHHH----HhccHHHHHHHHhccccCCcccccccccccchHHHHHHHHHHHHHHhcC
Confidence 467788888999999997655433222 2358999999763 1 0 1223345688899999998
Q ss_pred ChHHHHHHHhccc---hhHhhhhcc
Q psy4705 136 GEKQRQRKKLNFR---PFVSCLGGV 157 (164)
Q Consensus 136 ~~~~r~~Iv~~~~---~~~~~l~~~ 157 (164)
+++.|+.|.+.++ .++..+++-
T Consensus 182 ~~~~R~~~r~~~Gli~~Lv~~l~~~ 206 (233)
T 3tt9_A 182 GADGRKAMRRCDGLIDSLVHYVRGT 206 (233)
T ss_dssp CHHHHHHHHTSTTHHHHHHHHHHHH
T ss_pred CHHHHHHHHHCCCcHHHHHHHHHhh
Confidence 8889999988644 277777764
No 4
>4db6_A Armadillo repeat protein; solenoid repeat, armadillo repeat motif, de novo protein; 1.80A {Synthetic construct} PDB: 4db9_A 4dba_A
Probab=99.44 E-value=1.2e-12 Score=100.33 Aligned_cols=149 Identities=17% Similarity=0.144 Sum_probs=121.0
Q ss_pred hhHHHHHHHHHHhcC----------hhHHHHHHHhhcccCCHHHHHHHHHHHHHhc-cchhhHHHHHhcChHHHHHHHhh
Q psy4705 2 LRRAATQTMTNMIVS----------EDVIKIYEANKDKVESDNTRELLARILNALA-SQQELRGLMVQQGASKALIHLAH 70 (164)
Q Consensus 2 ~~~aa~~~l~nli~~----------~~vi~~l~v~l~k~~S~~~k~~~~~il~~Ls-~~~~~R~~ivqqGai~~Ll~l~~ 70 (164)
+|.+|+.++.|+... .|+++.+ +.+.+++++.+++.++.+|.+++ .+++.+..+++.|+++.|+.+..
T Consensus 28 v~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~L-~~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~L~~lL~ 106 (210)
T 4db6_A 28 ELQSALRKLSQIASGGNEQIQAVIDAGALPAL-VQLLSSPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLS 106 (210)
T ss_dssp HHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHH-HHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTCHHHHHHHTT
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHcCCHHHH-HHHHcCCCHHHHHHHHHHHHHHhcCCcHHHHHHHHCCCHHHHHHHHc
Confidence 578899999999632 3678887 78889999999999999999999 46889999999999999999998
Q ss_pred ccchhhhhHHHHHHHHHhCcCCCCc-ccCCCCcccchHHHHhccCCCcchHHHHHHHHHHHcccCCChHHHHHHHhccch
Q psy4705 71 NGTVKGKRQAAQGLARLGITLNPEV-AFPGERSLEVVRPLLSLLHPEATALETFEGLMALCNLAAIGEKQRQRKKLNFRP 149 (164)
Q Consensus 71 ~gt~~~~~~A~~ALakLlIs~nP~l-~f~~~~~~~av~pL~~LL~~~~~~l~~fEaLlALTNLAs~~~~~r~~Iv~~~~~ 149 (164)
++.+..+..|+.+|.+|+....... .+ ...+++++|+.+|. +.+..-+.+|+.+|.||+..+++.+..+++.+..
T Consensus 107 ~~~~~v~~~a~~~L~~l~~~~~~~~~~~---~~~~~i~~L~~ll~-~~~~~v~~~a~~aL~~l~~~~~~~~~~~~~~g~i 182 (210)
T 4db6_A 107 SPNEQILQEALWALSNIASGGNEQIQAV---IDAGALPALVQLLS-SPNEQILQEALWALSNIASGGNEQKQAVKEAGAL 182 (210)
T ss_dssp CSCHHHHHHHHHHHHHHTTSCHHHHHHH---HHTTHHHHHHHHTT-CSCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHH
T ss_pred CCcHHHHHHHHHHHHHHHcCCHHHHHHH---HHcCcHHHHHHHHc-CCCHHHHHHHHHHHHHHHcCCcHHHHHHHHCCCH
Confidence 8888888999999999975332221 11 12458999999998 4555667889999999999878888888887763
Q ss_pred --hHhhhh
Q psy4705 150 --FVSCLG 155 (164)
Q Consensus 150 --~~~~l~ 155 (164)
+++++.
T Consensus 183 ~~L~~ll~ 190 (210)
T 4db6_A 183 EKLEQLQS 190 (210)
T ss_dssp HHHHHGGG
T ss_pred HHHHHHHh
Confidence 666664
No 5
>4db8_A Armadillo-repeat protein; solenoid repeat, de novo protein; 2.50A {Synthetic construct}
Probab=99.40 E-value=5.8e-12 Score=98.82 Aligned_cols=150 Identities=19% Similarity=0.160 Sum_probs=122.3
Q ss_pred hhHHHHHHHHHH----------hcChhHHHHHHHhhcccCCHHHHHHHHHHHHHhcc-chhhHHHHHhcChHHHHHHHhh
Q psy4705 2 LRRAATQTMTNM----------IVSEDVIKIYEANKDKVESDNTRELLARILNALAS-QQELRGLMVQQGASKALIHLAH 70 (164)
Q Consensus 2 ~~~aa~~~l~nl----------i~~~~vi~~l~v~l~k~~S~~~k~~~~~il~~Ls~-~~~~R~~ivqqGai~~Ll~l~~ 70 (164)
.++.|+.+++++ +...|+++.+ +.+.+++++.+++.++.+|.+++. +++.+..+++.|++..|+.+..
T Consensus 28 ~~~~a~~~L~~~l~~~~~~~~~~~~~g~i~~L-~~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~L~~lL~ 106 (252)
T 4db8_A 28 EQLSATRKFSQILSDGNEQIQAVIDAGALPAL-VQLLSSPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLS 106 (252)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHH-HHGGGCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHGGG
T ss_pred HHHHHHHHHHHHHcCCCchHHHHHHcCcHHHH-HHHHcCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHcCCHHHHHHHHc
Confidence 567888888764 5567889998 899999999999999999999998 6899999999999999999998
Q ss_pred ccchhhhhHHHHHHHHHhCcCCCC-cccCCCCcccchHHHHhccCCCcchHHHHHHHHHHHcccCCChHHHHHHHhccch
Q psy4705 71 NGTVKGKRQAAQGLARLGITLNPE-VAFPGERSLEVVRPLLSLLHPEATALETFEGLMALCNLAAIGEKQRQRKKLNFRP 149 (164)
Q Consensus 71 ~gt~~~~~~A~~ALakLlIs~nP~-l~f~~~~~~~av~pL~~LL~~~~~~l~~fEaLlALTNLAs~~~~~r~~Iv~~~~~ 149 (164)
++.+..+..|+.+|.+|....... ..+. ..+++++|+.+|. +.+..-+.+|+.+|.||+..+++.++.+++.+..
T Consensus 107 ~~~~~v~~~a~~~L~~l~~~~~~~~~~~~---~~~~i~~L~~lL~-~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i 182 (252)
T 4db8_A 107 SPNEQILQEALWALSNIASGGNEQIQAVI---DAGALPALVQLLS-SPNEQILQEALWALSNIASGGNEQIQAVIDAGAL 182 (252)
T ss_dssp CSCHHHHHHHHHHHHHHTTSCHHHHHHHH---HTTHHHHHHHGGG-CSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTCH
T ss_pred CCCHHHHHHHHHHHHHhhcCCchHHHHHH---HCCCHHHHHHHHh-CCCHHHHHHHHHHHHHHHcCChHHHHHHHHCCCH
Confidence 888888999999999996554433 2221 2458999999998 5565667889999999998877878888877663
Q ss_pred --hHhhhhc
Q psy4705 150 --FVSCLGG 156 (164)
Q Consensus 150 --~~~~l~~ 156 (164)
+++.|..
T Consensus 183 ~~L~~ll~~ 191 (252)
T 4db8_A 183 PALVQLLSS 191 (252)
T ss_dssp HHHHHGGGC
T ss_pred HHHHHHHCC
Confidence 7766653
No 6
>4db8_A Armadillo-repeat protein; solenoid repeat, de novo protein; 2.50A {Synthetic construct}
Probab=99.40 E-value=5.5e-12 Score=98.99 Aligned_cols=151 Identities=17% Similarity=0.133 Sum_probs=122.6
Q ss_pred hhHHHHHHHHHHhcC----------hhHHHHHHHhhcccCCHHHHHHHHHHHHHhccchhhH-HHHHhcChHHHHHHHhh
Q psy4705 2 LRRAATQTMTNMIVS----------EDVIKIYEANKDKVESDNTRELLARILNALASQQELR-GLMVQQGASKALIHLAH 70 (164)
Q Consensus 2 ~~~aa~~~l~nli~~----------~~vi~~l~v~l~k~~S~~~k~~~~~il~~Ls~~~~~R-~~ivqqGai~~Ll~l~~ 70 (164)
+|..|+.++.|+... .|+++.+ +.+.+++++.+++.++.+|.+|+.+++.+ ..+++.|+++.|+++..
T Consensus 70 v~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~L-~~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~lL~ 148 (252)
T 4db8_A 70 ILQEALWALSNIASGGNEQIQAVIDAGALPAL-VQLLSSPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLS 148 (252)
T ss_dssp HHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHH-HHGGGCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHGGG
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHcCCHHHH-HHHHcCCCHHHHHHHHHHHHHhhcCCchHHHHHHHCCCHHHHHHHHh
Confidence 578899999999763 5688887 78889999999999999999999999988 99999999999999988
Q ss_pred ccchhhhhHHHHHHHHHhCcCCCCcccCCCCcccchHHHHhccCCCcchHHHHHHHHHHHcccCCChHHHHHHHhccch-
Q psy4705 71 NGTVKGKRQAAQGLARLGITLNPEVAFPGERSLEVVRPLLSLLHPEATALETFEGLMALCNLAAIGEKQRQRKKLNFRP- 149 (164)
Q Consensus 71 ~gt~~~~~~A~~ALakLlIs~nP~l~f~~~~~~~av~pL~~LL~~~~~~l~~fEaLlALTNLAs~~~~~r~~Iv~~~~~- 149 (164)
++.+..+..|+.+|.+|....+.....- ...+++++|+.+|. +.+..-+.+|+.+|.||+..+++.++.+++.+..
T Consensus 149 ~~~~~v~~~a~~~L~~l~~~~~~~~~~~--~~~~~i~~L~~ll~-~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~g~i~ 225 (252)
T 4db8_A 149 SPNEQILQEALWALSNIASGGNEQIQAV--IDAGALPALVQLLS-SPNEQILQEALWALSNIASGGNEQKQAVKEAGALE 225 (252)
T ss_dssp CSCHHHHHHHHHHHHHHTTSCHHHHHHH--HHTTCHHHHHHGGG-CSSHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHH
T ss_pred CCCHHHHHHHHHHHHHHHcCChHHHHHH--HHCCCHHHHHHHHC-CCCHHHHHHHHHHHHHHhcCCHHHHHHHHHCCcHH
Confidence 8888888999999999975443221110 12458999999998 4555567789999999998888888888887663
Q ss_pred -hHhhhhc
Q psy4705 150 -FVSCLGG 156 (164)
Q Consensus 150 -~~~~l~~ 156 (164)
+++++..
T Consensus 226 ~L~~ll~~ 233 (252)
T 4db8_A 226 KLEQLQSH 233 (252)
T ss_dssp HHHTTTTC
T ss_pred HHHHHhCC
Confidence 6666653
No 7
>3nmw_A APC variant protein; ARMADIILO repeats domain, cell adhesion-cell cycle complex; 1.60A {Homo sapiens} PDB: 3nmx_A 3t7u_A 3au3_A 3qhe_A
Probab=99.37 E-value=2.9e-12 Score=109.56 Aligned_cols=150 Identities=15% Similarity=0.073 Sum_probs=118.8
Q ss_pred hhHHHHHHHHHHhcC-----------hhHHHHHHHhh-cccCCHHHHHHHHHHHHHhcc-chhhHHHHH-hcChHHHHHH
Q psy4705 2 LRRAATQTMTNMIVS-----------EDVIKIYEANK-DKVESDNTRELLARILNALAS-QQELRGLMV-QQGASKALIH 67 (164)
Q Consensus 2 ~~~aa~~~l~nli~~-----------~~vi~~l~v~l-~k~~S~~~k~~~~~il~~Ls~-~~~~R~~iv-qqGai~~Ll~ 67 (164)
+++.|+.+++|+... .|++|.+ +.+ .+++++..++.++.+|.+|+. ++++|..++ ..|+++.|++
T Consensus 143 v~~~A~~aL~nLs~~~~~~~k~~i~~~G~Ip~L-v~lL~~~~~~~~~~~A~~aL~nLs~~~~~nk~~i~~~~Gai~~Lv~ 221 (354)
T 3nmw_A 143 LQQVIASVLRNLSWRADVNSKKTLREVGSVKAL-MECALEVKKESTLKSVLSALWNLSAHCTENKADICAVDGALAFLVG 221 (354)
T ss_dssp HHHHHHHHHHHHHTTCCHHHHHHHHHTTHHHHH-HHHHHHCCCHHHHHHHHHHHHHHHTTCHHHHHHHHHSTTHHHHHHH
T ss_pred HHHHHHHHHHHHhccCCHHHHHHHHHCCCHHHH-HHHHhcCCCHHHHHHHHHHHHHHHccChhhhHHHHHhcCcHHHHHH
Confidence 467888888888542 4678887 775 677889999999999999999 778899999 7999999999
Q ss_pred Hhhccch----hhhhHHHHHHHHHhC--cCCCCc--ccCCCCcccchHHHHhccCCCcchHHHHHHHHHHHcccCCChHH
Q psy4705 68 LAHNGTV----KGKRQAAQGLARLGI--TLNPEV--AFPGERSLEVVRPLLSLLHPEATALETFEGLMALCNLAAIGEKQ 139 (164)
Q Consensus 68 l~~~gt~----~~~~~A~~ALakLlI--s~nP~l--~f~~~~~~~av~pL~~LL~~~~~~l~~fEaLlALTNLAs~~~~~ 139 (164)
+...+.+ +.+..|..+|.+|.. +.+|.. .+ ...++||||+.+|. +++..-+.+|..+|.||++.+++.
T Consensus 222 lL~~~~~~~~~~v~~~A~~aL~nLs~~~a~~~~~~~~i---~~~g~i~~Lv~lL~-~~~~~v~~~A~~aL~nLa~~~~~~ 297 (354)
T 3nmw_A 222 TLTYRSQTNTLAIIESGGGILRNVSSLIATNEDHRQIL---RENNCLQTLLQHLK-SHSLTIVSNACGTLWNLSARNPKD 297 (354)
T ss_dssp HTTCCCSSSCCHHHHHHHHHHHHHHHHHTTCHHHHHHH---HTTTHHHHHHHHTT-CSCHHHHHHHHHHHHHHTSSCHHH
T ss_pred HhccCCCcccHHHHHHHHHHHHHHHhhccCCHHHHHHH---HHcCCHHHHHHHHc-CCChHHHHHHHHHHHHHhCCCHHH
Confidence 8876654 367779999999974 234432 12 12568999999998 566667888999999999777888
Q ss_pred HHHHHhccch--hHhhhhc
Q psy4705 140 RQRKKLNFRP--FVSCLGG 156 (164)
Q Consensus 140 r~~Iv~~~~~--~~~~l~~ 156 (164)
++.|++.|.. |+++|..
T Consensus 298 ~~~i~~~G~i~~Lv~LL~s 316 (354)
T 3nmw_A 298 QEALWDMGAVSMLKNLIHS 316 (354)
T ss_dssp HHHHHHTTHHHHHHTTTTC
T ss_pred HHHHHHCCCHHHHHHHHhC
Confidence 9999998873 8877753
No 8
>3l6x_A Catenin delta-1; catenin, armadillo, ARM, JMD, CE adhesion, complex, cell-CELL adhesion, ARVCF, delta-catenin DP120, JAC-1, cell membrane, membrane; 2.40A {Homo sapiens} PDB: 3l6y_A
Probab=99.36 E-value=7.2e-12 Score=113.91 Aligned_cols=150 Identities=9% Similarity=0.013 Sum_probs=118.3
Q ss_pred hhHHHHHHHHHHh----------cChhHHHHHHHhhcccCCHHHHHHHHHHHHHhcc--chhhHHHHHhcChHHHHHHHh
Q psy4705 2 LRRAATQTMTNMI----------VSEDVIKIYEANKDKVESDNTRELLARILNALAS--QQELRGLMVQQGASKALIHLA 69 (164)
Q Consensus 2 ~~~aa~~~l~nli----------~~~~vi~~l~v~l~k~~S~~~k~~~~~il~~Ls~--~~~~R~~ivqqGai~~Ll~l~ 69 (164)
++..|+.++.|+. ...|+||.| +.+.+++++.++++++.+|.+|+. ++++|..|++.||++.|+.+.
T Consensus 64 ~q~~Aa~~L~~La~~~~~~k~~V~~~G~Ip~L-V~LL~s~~~~vq~~Aa~AL~nLa~~~~~~nk~~I~~~GaIp~LV~LL 142 (584)
T 3l6x_A 64 VKSNAAAYLQHLCYRNDKVKTDVRKLKGIPVL-VGLLDHPKKEVHLGACGALKNISFGRDQDNKIAIKNCDGVPALVRLL 142 (584)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHH-HHGGGCSSHHHHHHHHHHHHHHTSSSCHHHHHHHHHTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCChHHHHHHHHcCCcHHH-HHHHCCCCHHHHHHHHHHHHHHHccCCHHHHHHHHHcCCHHHHHHHH
Confidence 4566778888884 346889998 899999999999999999999998 489999999999999999988
Q ss_pred hcc-chhhhhHHHHHHHHHhCcCCCCcccCCCCcccchHHHHhccC-C----------------CcchHHHHHHHHHHHc
Q psy4705 70 HNG-TVKGKRQAAQGLARLGITLNPEVAFPGERSLEVVRPLLSLLH-P----------------EATALETFEGLMALCN 131 (164)
Q Consensus 70 ~~g-t~~~~~~A~~ALakLlIs~nP~l~f~~~~~~~av~pL~~LL~-~----------------~~~~l~~fEaLlALTN 131 (164)
+++ ....+..|+.+|.+|+.+.++...+. .++||||+.|+- | ..+..-.+.|.-+|.|
T Consensus 143 ~s~~~~~~~e~aa~aL~nLS~~~~~k~~I~----~~alp~Lv~LL~~p~sg~~~~~~~~~k~~~~~d~~V~~nAa~~L~N 218 (584)
T 3l6x_A 143 RKARDMDLTEVITGTLWNLSSHDSIKMEIV----DHALHALTDEVIIPHSGWEREPNEDCKPRHIEWESVLTNTAGCLRN 218 (584)
T ss_dssp HHCCSHHHHHHHHHHHHHHTTSGGGHHHHH----HHTHHHHHHHTHHHHHCCC----------CCCCHHHHHHHHHHHHH
T ss_pred cCCCCHHHHHHHHHHHHHHhCCchhhHHHH----hccHHHHHHHHhcccccccccccccccccccccHHHHHHHHHHHHH
Confidence 864 55667889999999987655544442 358999999771 0 0112334559999999
Q ss_pred ccCCChHHHHHHHhccc---hhHhhhhc
Q psy4705 132 LAAIGEKQRQRKKLNFR---PFVSCLGG 156 (164)
Q Consensus 132 LAs~~~~~r~~Iv~~~~---~~~~~l~~ 156 (164)
|++.+++.|+.|++.++ .|+..|+.
T Consensus 219 Ls~~~~~~R~~i~~~~Gli~~LV~~L~~ 246 (584)
T 3l6x_A 219 VSSERSEARRKLRECDGLVDALIFIVQA 246 (584)
T ss_dssp HTSSCHHHHHHHHHSTTHHHHHHHHHHH
T ss_pred HhcCCHHHHHHHHHcCCcHHHHHHHHHH
Confidence 99988888999998655 36666654
No 9
>3nmw_A APC variant protein; ARMADIILO repeats domain, cell adhesion-cell cycle complex; 1.60A {Homo sapiens} PDB: 3nmx_A 3t7u_A 3au3_A 3qhe_A
Probab=99.35 E-value=6.3e-12 Score=107.43 Aligned_cols=152 Identities=18% Similarity=0.175 Sum_probs=118.5
Q ss_pred hhHHHHHHHHHHhc-----------ChhHHHHHHHhhcccCCHHHHHHHHHHHHHhccc--hhhHHHHHhcChHHHHHHH
Q psy4705 2 LRRAATQTMTNMIV-----------SEDVIKIYEANKDKVESDNTRELLARILNALASQ--QELRGLMVQQGASKALIHL 68 (164)
Q Consensus 2 ~~~aa~~~l~nli~-----------~~~vi~~l~v~l~k~~S~~~k~~~~~il~~Ls~~--~~~R~~ivqqGai~~Ll~l 68 (164)
+++.|+.++.|+.. ..|++|.| +.+.+++++.+++.++.+|.+|+.. +++|..+++.||++.|+++
T Consensus 100 ~q~~Aa~aL~nLa~~~~~~k~~i~~~~GaIp~L-V~LL~s~~~~v~~~A~~aL~nLs~~~~~~~k~~i~~~G~Ip~Lv~l 178 (354)
T 3nmw_A 100 LRRYAGMALTNLTFGDVANKATLCSMKGCMRAL-VAQLKSESEDLQQVIASVLRNLSWRADVNSKKTLREVGSVKALMEC 178 (354)
T ss_dssp HHHHHHHHHHHHTSSCHHHHHHHHHCHHHHHHH-HHGGGCSCHHHHHHHHHHHHHHHTTCCHHHHHHHHHTTHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHcCCcHHHH-HHHHCCCCHHHHHHHHHHHHHHhccCCHHHHHHHHHCCCHHHHHHH
Confidence 57899999999932 45668888 8999999999999999999999974 6799999999999999996
Q ss_pred -hhccchhhhhHHHHHHHHHhCcC-CCCcccCCCCcccchHHHHhccCCCcch---HHHHHHHHHHHcccC---CChHHH
Q psy4705 69 -AHNGTVKGKRQAAQGLARLGITL-NPEVAFPGERSLEVVRPLLSLLHPEATA---LETFEGLMALCNLAA---IGEKQR 140 (164)
Q Consensus 69 -~~~gt~~~~~~A~~ALakLlIs~-nP~l~f~~~~~~~av~pL~~LL~~~~~~---l~~fEaLlALTNLAs---~~~~~r 140 (164)
.+.+.+..+..|+.+|.+|.... +....+. ...++||+|+.+|..+.+. .-+.+|.-+|.||++ .+++.|
T Consensus 179 L~~~~~~~~~~~A~~aL~nLs~~~~~nk~~i~--~~~Gai~~Lv~lL~~~~~~~~~~v~~~A~~aL~nLs~~~a~~~~~~ 256 (354)
T 3nmw_A 179 ALEVKKESTLKSVLSALWNLSAHCTENKADIC--AVDGALAFLVGTLTYRSQTNTLAIIESGGGILRNVSSLIATNEDHR 256 (354)
T ss_dssp HHHCCCHHHHHHHHHHHHHHHTTCHHHHHHHH--HSTTHHHHHHHHTTCCCSSSCCHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HhcCCCHHHHHHHHHHHHHHHccChhhhHHHH--HhcCcHHHHHHHhccCCCcccHHHHHHHHHHHHHHHhhccCCHHHH
Confidence 45666777888999999997632 2122221 1256999999999743322 235678999999987 467889
Q ss_pred HHHHhccc--hhHhhhhc
Q psy4705 141 QRKKLNFR--PFVSCLGG 156 (164)
Q Consensus 141 ~~Iv~~~~--~~~~~l~~ 156 (164)
+.|++.+. ++++.|+.
T Consensus 257 ~~i~~~g~i~~Lv~lL~~ 274 (354)
T 3nmw_A 257 QILRENNCLQTLLQHLKS 274 (354)
T ss_dssp HHHHTTTHHHHHHHHTTC
T ss_pred HHHHHcCCHHHHHHHHcC
Confidence 99888776 38888764
No 10
>1xm9_A Plakophilin 1; armadillo repeat, cell adhesion; 2.80A {Homo sapiens} SCOP: a.118.1.24
Probab=99.34 E-value=7.4e-12 Score=108.96 Aligned_cols=148 Identities=13% Similarity=0.061 Sum_probs=116.9
Q ss_pred hhHHHHHHHHHH----------hcChhHHHHHHHhhcccCCHHHHHHHHHHHHHhccc-hhhHHHHHhcChHHHHHHHhh
Q psy4705 2 LRRAATQTMTNM----------IVSEDVIKIYEANKDKVESDNTRELLARILNALASQ-QELRGLMVQQGASKALIHLAH 70 (164)
Q Consensus 2 ~~~aa~~~l~nl----------i~~~~vi~~l~v~l~k~~S~~~k~~~~~il~~Ls~~-~~~R~~ivqqGai~~Ll~l~~ 70 (164)
++..|+.++.|+ +...|++|.+ +.+.+++++.+++.++..|.+|+.+ +++|..+++.||++.|+++.+
T Consensus 18 ~q~~A~~~L~~l~~~~~~~~~~i~~~g~i~~L-v~lL~s~~~~~~~~A~~aL~nLa~~~~~~k~~i~~~G~i~~Lv~lL~ 96 (457)
T 1xm9_A 18 YQAIGAYYIQHTCFQDESAKQQVYQLGGICKL-VDLLRSPNQNVQQAAAGALRNLVFRSTTNKLETRRQNGIREAVSLLR 96 (457)
T ss_dssp HHHHHHHHHHHHTSSCSSHHHHHHHTTHHHHH-HHHTTSSCHHHHHHHHHHHHHHHSSCHHHHHHHHHTTCHHHHHHHHT
T ss_pred HHHHHHHHHHHHHcCChHHHHHHHHcCCHHHH-HHHHcCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHcCCHHHHHHHHh
Confidence 467788888888 4446788888 8999999999999999999999987 999999999999999999887
Q ss_pred -ccchhhhhHHHHHHHHHhCcCCCCcccCCCCcccchHHHHhccCC-------Ccc--------hHHHHHHHHHHHcccC
Q psy4705 71 -NGTVKGKRQAAQGLARLGITLNPEVAFPGERSLEVVRPLLSLLHP-------EAT--------ALETFEGLMALCNLAA 134 (164)
Q Consensus 71 -~gt~~~~~~A~~ALakLlIs~nP~l~f~~~~~~~av~pL~~LL~~-------~~~--------~l~~fEaLlALTNLAs 134 (164)
++.++.+..|+.+|.+|+...+....+. . ++||||+.+|.. +.+ ..-...|+.||.||++
T Consensus 97 ~~~~~~~~~~a~~aL~nLa~~~~~~~~i~---~-g~i~~Lv~ll~~~~s~~~~~~~~~~~e~~~~~v~~~a~~aL~nLs~ 172 (457)
T 1xm9_A 97 RTGNAEIQKQLTGLLWNLSSTDELKEELI---A-DALPVLADRVIIPFSGWCDGNSNMSREVVDPEVFFNATGCLRNLSS 172 (457)
T ss_dssp TCCCHHHHHHHHHHHHHHHTSSSTHHHHH---H-HHHHHHHHHTTHHHHTCC---------CCCHHHHHHHHHHHHHHTT
T ss_pred hCCCHHHHHHHHHHHHHHhcCHHhHHHHH---h-ccHHHHHHHHhccccccccCccchhcccccHHHHHHHHHHHHHHcc
Confidence 7788888999999999987733332221 2 799999999931 111 1112379999999998
Q ss_pred CChHHHHHHHhc-cc--hhHhhhh
Q psy4705 135 IGEKQRQRKKLN-FR--PFVSCLG 155 (164)
Q Consensus 135 ~~~~~r~~Iv~~-~~--~~~~~l~ 155 (164)
. ++.|+.|++. |. .++..|.
T Consensus 173 ~-~~~~~~i~~~~g~i~~Lv~lL~ 195 (457)
T 1xm9_A 173 A-DAGRQTMRNYSGLIDSLMAYVQ 195 (457)
T ss_dssp S-HHHHHHHTTSTTHHHHHHHHHH
T ss_pred C-HHHHHHHHHcCCCHHHHHHHHH
Confidence 7 7788888875 65 2776665
No 11
>4hxt_A De novo protein OR329; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.95A {Artificial gene}
Probab=99.32 E-value=2.2e-11 Score=94.43 Aligned_cols=149 Identities=17% Similarity=0.164 Sum_probs=121.5
Q ss_pred hhHHHHHHHHHHhcC----------hhHHHHHHHhhcccCCHHHHHHHHHHHHHhc-cchhhHHHHHhcChHHHHHHHhh
Q psy4705 2 LRRAATQTMTNMIVS----------EDVIKIYEANKDKVESDNTRELLARILNALA-SQQELRGLMVQQGASKALIHLAH 70 (164)
Q Consensus 2 ~~~aa~~~l~nli~~----------~~vi~~l~v~l~k~~S~~~k~~~~~il~~Ls-~~~~~R~~ivqqGai~~Ll~l~~ 70 (164)
+|+.|+.++.|+..+ .|+++.+ +.+.+++++.+++.++.+|.+|+ .+++.+..+++.|+++.|+++..
T Consensus 60 v~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~l-~~ll~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~~l~ 138 (252)
T 4hxt_A 60 VQKEAARALANIASGPDEAIKAIVDAGGVEVL-VKLLTSTDSEVQKEAARALANIASGPDEAIKAIVDAGGVEVLVKLLT 138 (252)
T ss_dssp HHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHH-HHHTTCSSHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHcCChHHHHHHHHCCCHHHH-HHHHcCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHCCCHHHHHHHHc
Confidence 578899999999665 3678887 78888999999999999999999 67899999999999999999998
Q ss_pred ccchhhhhHHHHHHHHHhCcCCCC-cccCCCCcccchHHHHhccCCCcchHHHHHHHHHHHcccCCChHHHHHHHhccch
Q psy4705 71 NGTVKGKRQAAQGLARLGITLNPE-VAFPGERSLEVVRPLLSLLHPEATALETFEGLMALCNLAAIGEKQRQRKKLNFRP 149 (164)
Q Consensus 71 ~gt~~~~~~A~~ALakLlIs~nP~-l~f~~~~~~~av~pL~~LL~~~~~~l~~fEaLlALTNLAs~~~~~r~~Iv~~~~~ 149 (164)
+..+..+..|+.+|.+|....... ..+ ...+++++|+.++. +.+..-+.+++.+|.||+..+++.++.+++.+..
T Consensus 139 ~~~~~~~~~a~~~L~~l~~~~~~~~~~~---~~~~~i~~L~~ll~-~~~~~v~~~a~~~L~~l~~~~~~~~~~l~~~~~i 214 (252)
T 4hxt_A 139 STDSEVQKEAARALANIASGPDEAIKAI---VDAGGVEVLVKLLT-STDSEVQKEAARALANIASGPTSAIKAIVDAGGV 214 (252)
T ss_dssp CSCHHHHHHHHHHHHHHTTSCHHHHHHH---HHTTHHHHHHHHTT-CSCHHHHHHHHHHHHHHTTSBHHHHHHHHHTTHH
T ss_pred CCCHHHHHHHHHHHHHHHcCCHHHHHHH---HHCcCHHHHHHHHC-CCCHHHHHHHHHHHHHHHcCCHHHHHHHHHCCCH
Confidence 888888999999999996543221 111 12458999999998 5556667889999999998777888888887663
Q ss_pred --hHhhhh
Q psy4705 150 --FVSCLG 155 (164)
Q Consensus 150 --~~~~l~ 155 (164)
+++.+.
T Consensus 215 ~~L~~ll~ 222 (252)
T 4hxt_A 215 EVLQKLLT 222 (252)
T ss_dssp HHHHHGGG
T ss_pred HHHHHHHC
Confidence 666664
No 12
>4hxt_A De novo protein OR329; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.95A {Artificial gene}
Probab=99.31 E-value=3.7e-11 Score=93.18 Aligned_cols=149 Identities=18% Similarity=0.165 Sum_probs=120.3
Q ss_pred hhHHHHHHHHHHhcCh----------hHHHHHHHhhcccCCHHHHHHHHHHHHHhccc-hhhHHHHHhcChHHHHHHHhh
Q psy4705 2 LRRAATQTMTNMIVSE----------DVIKIYEANKDKVESDNTRELLARILNALASQ-QELRGLMVQQGASKALIHLAH 70 (164)
Q Consensus 2 ~~~aa~~~l~nli~~~----------~vi~~l~v~l~k~~S~~~k~~~~~il~~Ls~~-~~~R~~ivqqGai~~Ll~l~~ 70 (164)
+|..|+.+++++.... |+++.+ +.+.+++++.+++.++.+|.+++.+ ++.+..+++.|++..|+.+..
T Consensus 18 ~~~~a~~~L~~l~~~~~~~~~~~~~~g~i~~L-~~ll~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~l~~ll~ 96 (252)
T 4hxt_A 18 TQKEAARDLAEIASGPASAIKAIVDAGGVEVL-VKLLTSTDSEVQKEAARALANIASGPDEAIKAIVDAGGVEVLVKLLT 96 (252)
T ss_dssp HHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHH-HHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTT
T ss_pred HHHHHHHHHHHHhcCCcHHHHHHHHCCCHHHH-HHHHhCCCHHHHHHHHHHHHHHHcCChHHHHHHHHCCCHHHHHHHHc
Confidence 5788999999996543 688888 7888999999999999999999999 899999999999999999988
Q ss_pred ccchhhhhHHHHHHHHHhCcCCC-CcccCCCCcccchHHHHhccCCCcchHHHHHHHHHHHcccCCChHHHHHHHhccch
Q psy4705 71 NGTVKGKRQAAQGLARLGITLNP-EVAFPGERSLEVVRPLLSLLHPEATALETFEGLMALCNLAAIGEKQRQRKKLNFRP 149 (164)
Q Consensus 71 ~gt~~~~~~A~~ALakLlIs~nP-~l~f~~~~~~~av~pL~~LL~~~~~~l~~fEaLlALTNLAs~~~~~r~~Iv~~~~~ 149 (164)
++.+..+..|+.+|.++...... ...+. ..+++++|+.+++ +.+..-+..++.+|.||+..+++.++.+++.+..
T Consensus 97 ~~~~~v~~~a~~~L~~l~~~~~~~~~~~~---~~~~i~~L~~~l~-~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~i 172 (252)
T 4hxt_A 97 STDSEVQKEAARALANIASGPDEAIKAIV---DAGGVEVLVKLLT-STDSEVQKEAARALANIASGPDEAIKAIVDAGGV 172 (252)
T ss_dssp CSSHHHHHHHHHHHHHHTTSCHHHHHHHH---HTTHHHHHHHHTT-CSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHH
T ss_pred CCCHHHHHHHHHHHHHHHcCCHHHHHHHH---HCCCHHHHHHHHc-CCCHHHHHHHHHHHHHHHcCCHHHHHHHHHCcCH
Confidence 88888899999999999743221 11111 1358999999998 4555567789999999998877777788876662
Q ss_pred --hHhhhh
Q psy4705 150 --FVSCLG 155 (164)
Q Consensus 150 --~~~~l~ 155 (164)
++++|.
T Consensus 173 ~~L~~ll~ 180 (252)
T 4hxt_A 173 EVLVKLLT 180 (252)
T ss_dssp HHHHHHTT
T ss_pred HHHHHHHC
Confidence 666654
No 13
>3ul1_B Importin subunit alpha-2; arm repeat, armadillo repeat, nuclear transport, nuclear LOC signal binding, importin beta binding; 1.90A {Mus musculus} PDB: 3ukx_B 3uky_B 3ukz_B 3ukw_B 3ul0_B 3oqs_A 3rz9_A 3rzx_A 3uvu_A 1q1s_C 1q1t_C 3knd_A 1ejy_I 1iq1_C 1ejl_I 1pjn_B 1pjm_B 3q5u_A 3fey_C 3fex_C ...
Probab=99.28 E-value=5.3e-11 Score=104.62 Aligned_cols=151 Identities=18% Similarity=0.189 Sum_probs=120.6
Q ss_pred hhHHHHHHHHHH----------hcChhHHHHHHHhhcccCCHHHHHHHHHHHHHhccc-hhhHHHHHhcChHHHHHHHhh
Q psy4705 2 LRRAATQTMTNM----------IVSEDVIKIYEANKDKVESDNTRELLARILNALASQ-QELRGLMVQQGASKALIHLAH 70 (164)
Q Consensus 2 ~~~aa~~~l~nl----------i~~~~vi~~l~v~l~k~~S~~~k~~~~~il~~Ls~~-~~~R~~ivqqGai~~Ll~l~~ 70 (164)
++..|+.+++|+ ++..|++|.| +.+.+++++.+|++++.+|.+|+.| ++.|..++++|++.+|+.+..
T Consensus 117 lq~~Aa~aL~nias~~~e~~~~vv~~GaIp~L-v~lL~s~~~~v~e~A~~aL~nLa~d~~~~r~~v~~~G~i~~Ll~lL~ 195 (510)
T 3ul1_B 117 IQFESAWALTNIASGTSEQTKAVVDGGAIPAF-ISLLASPHAHISEQAVWALGNIAGDGSAFRDLVIKHGAIDPLLALLA 195 (510)
T ss_dssp HHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHH-HHHTTCSCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTCHHHHHHHTC
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHCCCHHHH-HHHHcCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHcCChHHHHHHHH
Confidence 567899999998 4556899998 8999999999999999999999997 678999999999999999875
Q ss_pred ccc-----hhhhhHHHHHHHHHhCcCCCCcccCCCCcccchHHHHhccCCCcchHHHHHHHHHHHcccCCChHHHHHHHh
Q psy4705 71 NGT-----VKGKRQAAQGLARLGITLNPEVAFPGERSLEVVRPLLSLLHPEATALETFEGLMALCNLAAIGEKQRQRKKL 145 (164)
Q Consensus 71 ~gt-----~~~~~~A~~ALakLlIs~nP~l~f~~~~~~~av~pL~~LL~~~~~~l~~fEaLlALTNLAs~~~~~r~~Iv~ 145 (164)
... ......++.+|.++....+|...+. ....++|+|+.+|+ +.+..-+..++.||.||+..+++..+.|+.
T Consensus 196 ~~~~~~~~~~~~~~a~~~L~nl~~~~~~~~~~~--~~~~~lp~L~~LL~-~~~~~v~~~A~~aL~~L~~~~~~~~~~i~~ 272 (510)
T 3ul1_B 196 VPDLSTLACGYLRNLTWTLSNLCRNKNPAPPLD--AVEQILPTLVRLLH-HNDPEVLADSCWAISYLTDGPNERIEMVVK 272 (510)
T ss_dssp SSCGGGSCHHHHHHHHHHHHHHHCCCSSCCCHH--HHHHHHHHHHHHTT-CSCHHHHHHHHHHHHHHTSSCHHHHHHHHT
T ss_pred hccchhhhHHHHHHHHHHHHHHhhcccchhHHH--HHHhHHHHHHHHHh-cCCHHHHHHHHHHHHHHhhchhhhHHHHHh
Confidence 432 2345678999999988887765442 23458999999998 445455667999999999887776677777
Q ss_pred ccch--hHhhhhc
Q psy4705 146 NFRP--FVSCLGG 156 (164)
Q Consensus 146 ~~~~--~~~~l~~ 156 (164)
.+.. ++++|..
T Consensus 273 ~g~i~~Lv~lL~~ 285 (510)
T 3ul1_B 273 KGVVPQLVKLLGA 285 (510)
T ss_dssp TTCHHHHHHHHTC
T ss_pred cccchhhhhhhcC
Confidence 6663 7777653
No 14
>3nmz_A APC variant protein; protein-protein complex, armadillo repeats, cell adhesion-CE complex; 3.01A {Homo sapiens}
Probab=99.28 E-value=1.3e-11 Score=109.15 Aligned_cols=149 Identities=15% Similarity=0.071 Sum_probs=118.6
Q ss_pred hhHHHHHHHHHHhcC-----------hhHHHHHHHhh-cccCCHHHHHHHHHHHHHhcc-chhhHHHHH-hcChHHHHHH
Q psy4705 2 LRRAATQTMTNMIVS-----------EDVIKIYEANK-DKVESDNTRELLARILNALAS-QQELRGLMV-QQGASKALIH 67 (164)
Q Consensus 2 ~~~aa~~~l~nli~~-----------~~vi~~l~v~l-~k~~S~~~k~~~~~il~~Ls~-~~~~R~~iv-qqGai~~Ll~ 67 (164)
++..|+.+++|+... .|+++.+ +.+ .+++++.+++.+++++.+|+. +++++..++ ..||+++|++
T Consensus 259 v~~~A~~aL~nLs~~~~~~~k~~I~~~GaI~~L-V~lLl~s~~~~v~~~A~~aL~nLs~~~~~nk~~I~~~~Gal~~Lv~ 337 (458)
T 3nmz_A 259 LQQVIASVLRNLSWRADVNSKKTLREVGSVKAL-MECALEVKKESTLKSVLSALWNLSAHCTENKADICAVDGALAFLVG 337 (458)
T ss_dssp HHHHHHHHHHHHTSSCCHHHHHHHHHTTHHHHH-HHHHTTCCSHHHHHHHHHHHHHHHHHCHHHHHHHHHSTTHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCHHHHHHHHHcCCHHHH-HHHHhcCCCHHHHHHHHHHHHHHccCCHHHHHHHHHhcCcHHHHHH
Confidence 467788888888552 4778887 775 677889999999999999999 788999999 7899999999
Q ss_pred Hhhccch----hhhhHHHHHHHHHhC--cCCCCc--ccCCCCcccchHHHHhccCCCcchHHHHHHHHHHHcccCCChHH
Q psy4705 68 LAHNGTV----KGKRQAAQGLARLGI--TLNPEV--AFPGERSLEVVRPLLSLLHPEATALETFEGLMALCNLAAIGEKQ 139 (164)
Q Consensus 68 l~~~gt~----~~~~~A~~ALakLlI--s~nP~l--~f~~~~~~~av~pL~~LL~~~~~~l~~fEaLlALTNLAs~~~~~ 139 (164)
+...+.+ +.+..|+.+|.+|.. +.+|.. .+ ...++||||+.+|. +++..-+.||..||.||++.+++.
T Consensus 338 LL~~~~~~~~~~v~~~A~~aL~nLs~~~a~~~~~~~~i---~~~G~i~~Lv~LL~-~~~~~v~~~A~~aL~nLa~~~~~~ 413 (458)
T 3nmz_A 338 TLTYRSQTNTLAIIESGGGILRNVSSLIATNEDHRQIL---RENNCLQTLLQHLK-SHSLTIVSNACGTLWNLSARNPKD 413 (458)
T ss_dssp HTTCCCSSSTTHHHHHHHHHHHHHHHHHTTCHHHHHHH---HHTTHHHHHHHHSS-CSCHHHHHHHHHHHHHHHSSCHHH
T ss_pred HhcCCCCcchHHHHHHHHHHHHHHHhcccCCHHHHHHH---HHcccHHHHHHHHc-CCChHHHHHHHHHHHHHHcCCHHH
Confidence 8876554 367779999999974 244432 11 12468999999998 566667889999999999877889
Q ss_pred HHHHHhccc--hhHhhhh
Q psy4705 140 RQRKKLNFR--PFVSCLG 155 (164)
Q Consensus 140 r~~Iv~~~~--~~~~~l~ 155 (164)
++.|++.|. +++++|.
T Consensus 414 ~~~i~~~G~I~~Lv~LL~ 431 (458)
T 3nmz_A 414 QEALWDMGAVSMLKNLIH 431 (458)
T ss_dssp HHHHHHHTHHHHHHTTTT
T ss_pred HHHHHHCCCHHHHHHHHh
Confidence 999999887 3888775
No 15
>3nmz_A APC variant protein; protein-protein complex, armadillo repeats, cell adhesion-CE complex; 3.01A {Homo sapiens}
Probab=99.28 E-value=2.4e-11 Score=107.35 Aligned_cols=152 Identities=18% Similarity=0.173 Sum_probs=118.6
Q ss_pred hhHHHHHHHHHHhc-----------ChhHHHHHHHhhcccCCHHHHHHHHHHHHHhcc--chhhHHHHHhcChHHHHHHH
Q psy4705 2 LRRAATQTMTNMIV-----------SEDVIKIYEANKDKVESDNTRELLARILNALAS--QQELRGLMVQQGASKALIHL 68 (164)
Q Consensus 2 ~~~aa~~~l~nli~-----------~~~vi~~l~v~l~k~~S~~~k~~~~~il~~Ls~--~~~~R~~ivqqGai~~Ll~l 68 (164)
+++.|+.++.|+.. ..|++|.+ +.+.+++++.+++.++.+|.+|+. ++++|..+++.||++.|+++
T Consensus 216 l~~~Aa~aL~nLa~~~~~~k~~i~~~~GaIp~L-V~LL~s~~~~v~~~A~~aL~nLs~~~~~~~k~~I~~~GaI~~LV~l 294 (458)
T 3nmz_A 216 LRRYAGMALTNLTFGDVANKATLCSMKGCMRAL-VAQLKSESEDLQQVIASVLRNLSWRADVNSKKTLREVGSVKALMEC 294 (458)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHCHHHHHHH-HHGGGCSCHHHHHHHHHHHHHHTSSCCHHHHHHHHHTTHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCcccHHHHHHcCCcHHHH-HHHHhCCCHHHHHHHHHHHHHHhcCCCHHHHHHHHHcCCHHHHHHH
Confidence 57889999999832 45668888 899999999999999999999998 46899999999999999996
Q ss_pred -hhccchhhhhHHHHHHHHHhC-cCCCCcccCCCCcccchHHHHhccCCCcch---HHHHHHHHHHHcccC---CChHHH
Q psy4705 69 -AHNGTVKGKRQAAQGLARLGI-TLNPEVAFPGERSLEVVRPLLSLLHPEATA---LETFEGLMALCNLAA---IGEKQR 140 (164)
Q Consensus 69 -~~~gt~~~~~~A~~ALakLlI-s~nP~l~f~~~~~~~av~pL~~LL~~~~~~---l~~fEaLlALTNLAs---~~~~~r 140 (164)
.+.+.+..+..|+.+|.+|.. +.+....+. ...++||+|+.+|....+. .-+.+|.-+|.||++ .+++.|
T Consensus 295 Ll~s~~~~v~~~A~~aL~nLs~~~~~nk~~I~--~~~Gal~~Lv~LL~~~~~~~~~~v~~~A~~aL~nLs~~~a~~~~~~ 372 (458)
T 3nmz_A 295 ALEVKKESTLKSVLSALWNLSAHCTENKADIC--AVDGALAFLVGTLTYRSQTNTLAIIESGGGILRNVSSLIATNEDHR 372 (458)
T ss_dssp HTTCCSHHHHHHHHHHHHHHHHHCHHHHHHHH--HSTTHHHHHHHHTTCCCSSSTTHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HhcCCCHHHHHHHHHHHHHHccCCHHHHHHHH--HhcCcHHHHHHHhcCCCCcchHHHHHHHHHHHHHHHhcccCCHHHH
Confidence 455667778889999999977 322222221 1256999999999743322 236679999999987 567889
Q ss_pred HHHHhccc--hhHhhhhc
Q psy4705 141 QRKKLNFR--PFVSCLGG 156 (164)
Q Consensus 141 ~~Iv~~~~--~~~~~l~~ 156 (164)
+.|++.+. ++++.|+.
T Consensus 373 ~~i~~~G~i~~Lv~LL~~ 390 (458)
T 3nmz_A 373 QILRENNCLQTLLQHLKS 390 (458)
T ss_dssp HHHHHTTHHHHHHHHSSC
T ss_pred HHHHHcccHHHHHHHHcC
Confidence 99988777 38887753
No 16
>1xqr_A HSPBP1 protein; armadillo repeat, superhelical twist, chaperone; 2.10A {Homo sapiens} SCOP: a.118.1.21 PDB: 1xqs_A*
Probab=99.27 E-value=1.7e-11 Score=102.51 Aligned_cols=138 Identities=11% Similarity=0.069 Sum_probs=113.0
Q ss_pred hcChhHHHHHHHh-hcccCCHHHHHHHHHHHHHhccc-hhhHHHHHhcChHHHHHHHhhcc-chhhhhHHHHHHHHHhCc
Q psy4705 14 IVSEDVIKIYEAN-KDKVESDNTRELLARILNALASQ-QELRGLMVQQGASKALIHLAHNG-TVKGKRQAAQGLARLGIT 90 (164)
Q Consensus 14 i~~~~vi~~l~v~-l~k~~S~~~k~~~~~il~~Ls~~-~~~R~~ivqqGai~~Ll~l~~~g-t~~~~~~A~~ALakLlIs 90 (164)
+...|+++++ +. +.+++++.+|+.++.+|.+++.+ ++.|..+++.||++.|+.+..+. ....+..|+.||++|.-+
T Consensus 77 ~~~~G~l~~L-v~~lL~s~~~~vr~~Aa~~Lg~ia~~n~~~~~~vv~~g~l~~Ll~LL~~~~~~~v~~~A~~ALsnl~~~ 155 (296)
T 1xqr_A 77 FCQLSGMHLL-VGRYLEAGAAGLRWRAAQLIGTCSQNVAAIQEQVLGLGALRKLLRLLDRDACDTVRVKALFAISCLVRE 155 (296)
T ss_dssp HHHTTHHHHH-HHTTTTCSSHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHHHCSCHHHHHHHHHHHHHHHTT
T ss_pred HHHcCCHHHH-HHHHHcCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHCCCHHHHHHHHccCCCHHHHHHHHHHHHHHHcC
Confidence 3446788887 78 89999999999999999999976 67999999999999999988754 567788899999999776
Q ss_pred CCCCc-ccCCCCcccchHHHHhccCCCcchHHHHHHHHHHHcccCCChHHHHHHHhccch--hHhhhhc
Q psy4705 91 LNPEV-AFPGERSLEVVRPLLSLLHPEATALETFEGLMALCNLAAIGEKQRQRKKLNFRP--FVSCLGG 156 (164)
Q Consensus 91 ~nP~l-~f~~~~~~~av~pL~~LL~~~~~~l~~fEaLlALTNLAs~~~~~r~~Iv~~~~~--~~~~l~~ 156 (164)
..|.. .|. ..+++|+|+.+|+ +.+..-+-+|+.||+||++.+++.++.+++.|+. ++++|..
T Consensus 156 ~~~~~~~~~---~~ggi~~L~~lL~-~~d~~v~~~A~~aLs~L~~~~~~~~~~vv~~g~i~~Lv~LL~~ 220 (296)
T 1xqr_A 156 QEAGLLQFL---RLDGFSVLMRAMQ-QQVQKLKVKSAFLLQNLLVGHPEHKGTLCSMGMVQQLVALVRT 220 (296)
T ss_dssp CHHHHHHHH---HTTHHHHHHHHHH-SSCHHHHHHHHHHHHHHHHHCGGGHHHHHHTTHHHHHHHHHTS
T ss_pred CcHHHHHHH---HCCCHHHHHHHHc-CCCHHHHHHHHHHHHHHHhCChHHHHHHHHcCCHHHHHHHHcC
Confidence 55532 343 2468999999998 4555556789999999998878889999998883 7777753
No 17
>3tpo_A Importin subunit alpha-2; nuclear import, protein transport; 2.10A {Mus musculus} PDB: 1qgk_B 1qgr_B
Probab=99.26 E-value=6e-11 Score=104.39 Aligned_cols=151 Identities=18% Similarity=0.187 Sum_probs=121.2
Q ss_pred hhHHHHHHHHHH----------hcChhHHHHHHHhhcccCCHHHHHHHHHHHHHhccc-hhhHHHHHhcChHHHHHHHhh
Q psy4705 2 LRRAATQTMTNM----------IVSEDVIKIYEANKDKVESDNTRELLARILNALASQ-QELRGLMVQQGASKALIHLAH 70 (164)
Q Consensus 2 ~~~aa~~~l~nl----------i~~~~vi~~l~v~l~k~~S~~~k~~~~~il~~Ls~~-~~~R~~ivqqGai~~Ll~l~~ 70 (164)
++..|+.+++|+ ++..|++|.| +.+.+++++.++++++.+|.+|+.+ ++.|..++++|++.+|+.+..
T Consensus 136 ~q~~Aa~aL~nia~~~~~~~~~vv~~Gaip~L-v~LL~s~~~~v~e~A~~aL~nLa~~~~~~r~~i~~~g~i~~Ll~lL~ 214 (529)
T 3tpo_A 136 IQFESAWALTNIASGTSEQTKAVVDGGAIPAF-ISLLASPHAHISEQAVWALGNIAGAGSAFRDLVIKHGAIDPLLALLA 214 (529)
T ss_dssp HHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHH-HHHTTCSCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTCHHHHHHTTC
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHCCCHHHH-HHHHcCCCHHHHHHHHHHHHHHhccCHHHHHHHHHcCCcHHHHHHHh
Confidence 567899999998 4556889998 8999999999999999999999987 789999999999999999775
Q ss_pred ccc-----hhhhhHHHHHHHHHhCcCCCCcccCCCCcccchHHHHhccCCCcchHHHHHHHHHHHcccCCChHHHHHHHh
Q psy4705 71 NGT-----VKGKRQAAQGLARLGITLNPEVAFPGERSLEVVRPLLSLLHPEATALETFEGLMALCNLAAIGEKQRQRKKL 145 (164)
Q Consensus 71 ~gt-----~~~~~~A~~ALakLlIs~nP~l~f~~~~~~~av~pL~~LL~~~~~~l~~fEaLlALTNLAs~~~~~r~~Iv~ 145 (164)
... ......+..+|.++..+.+|...+. ....++|+|+.||+ +.+..-..+++.||.||+..+++..+.|+.
T Consensus 215 ~~~~~~~~~~~~~~a~~~L~nl~~~~~~~~~~~--~~~~~lp~L~~LL~-~~~~~v~~~a~~aL~~l~~~~~~~~~~v~~ 291 (529)
T 3tpo_A 215 VPDLSTLACGYLRNLTWTLSNLCRNKNPAPPLD--AVEQILPTLVRLLH-HNDPEVLADSCWAISYLTDGPNERIEMVVK 291 (529)
T ss_dssp SSCGGGSCHHHHHHHHHHHHHHHCCCTTCCCHH--HHHHHHHHHHHHTT-SSCHHHHHHHHHHHHHHHSSCHHHHHHHHT
T ss_pred ccchhHhHHHHHHHHHHHHHHHHhcccchhhHH--HHhhHHHHHHHHhc-CCcHHHHHHHHHHHHHhhhhhhhhHHHHHh
Confidence 432 2335668999999988887765442 23458999999998 455455667999999999887777777777
Q ss_pred ccch--hHhhhhc
Q psy4705 146 NFRP--FVSCLGG 156 (164)
Q Consensus 146 ~~~~--~~~~l~~ 156 (164)
.+.. ++++|..
T Consensus 292 ~g~i~~Lv~lL~~ 304 (529)
T 3tpo_A 292 KGVVPQLVKLLGA 304 (529)
T ss_dssp TTCHHHHHHHHTC
T ss_pred ccchHHHHHHhcC
Confidence 7663 7777754
No 18
>3tt9_A Plakophilin-2; cell adhesion; 1.55A {Homo sapiens}
Probab=99.23 E-value=9.9e-12 Score=101.23 Aligned_cols=131 Identities=14% Similarity=0.049 Sum_probs=102.7
Q ss_pred HHHHHHHhhcccCCH--HHHHHHHHHHHHhcc-chhhHHHHHhcChHHHHHHHhhccchhhhhHHHHHHHHHhCcC-CCC
Q psy4705 19 VIKIYEANKDKVESD--NTRELLARILNALAS-QQELRGLMVQQGASKALIHLAHNGTVKGKRQAAQGLARLGITL-NPE 94 (164)
Q Consensus 19 vi~~l~v~l~k~~S~--~~k~~~~~il~~Ls~-~~~~R~~ivqqGai~~Ll~l~~~gt~~~~~~A~~ALakLlIs~-nP~ 94 (164)
.++.+ +.+.+++++ ..+..++..+.+|+. ++++|..+++.||+++|+.+.+++.+..+..|+.||.+|.... +..
T Consensus 9 ~i~~l-V~lL~s~~~~~~~q~~Aa~~l~~L~~~~~~~r~~I~~~G~Ip~LV~lL~s~~~~vq~~Aa~aL~nLa~~~~~nk 87 (233)
T 3tt9_A 9 TLERA-VSMLEADHMLPSRISAAATFIQHECFQKSEARKRVNQLRGILKLLQLLKVQNEDVQRAVCGALRNLVFEDNDNK 87 (233)
T ss_dssp CHHHH-HHTCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHTTHHHHHHHGGGCCCHHHHHHHHHHHHHHHTTCHHHH
T ss_pred cHHHH-HHHhCCCCchHHHHHHHHHHHHHHHcCCcHHHHHHHHcCCHHHHHHHHcCCCHHHHHHHHHHHHHHHhCCHHHH
Confidence 36676 888888887 888888899999994 6889999999999999999999888889999999999997632 222
Q ss_pred cccCCCCcccchHHHHhccCCCcchHHHHHHHHHHHcccCCChHHHHHHHhccch-hHhhh
Q psy4705 95 VAFPGERSLEVVRPLLSLLHPEATALETFEGLMALCNLAAIGEKQRQRKKLNFRP-FVSCL 154 (164)
Q Consensus 95 l~f~~~~~~~av~pL~~LL~~~~~~l~~fEaLlALTNLAs~~~~~r~~Iv~~~~~-~~~~l 154 (164)
... ...++||||+.||+.+.+..-+.+|.-||-||++. ++.|..|++.+-+ +++.+
T Consensus 88 ~~I---~~~GaI~~Lv~lL~~~~~~~~~e~a~~aL~nLS~~-~~~k~~i~~~~i~~Lv~ll 144 (233)
T 3tt9_A 88 LEV---AELNGVPRLLQVLKQTRDLETKKQITGLLWNLSSN-DKLKNLMITEALLTLTENI 144 (233)
T ss_dssp HHH---HHTTHHHHHHHHHHHCCCHHHHHHHHHHHHHHHTS-GGGHHHHHHHHHHHHCCCC
T ss_pred HHH---HHcCCHHHHHHHHccCCCHHHHHHHHHHHHHHHcC-hhhHHHHHhccHHHHHHHH
Confidence 222 12569999999997434445566788899999876 6678999987653 55543
No 19
>4db6_A Armadillo repeat protein; solenoid repeat, armadillo repeat motif, de novo protein; 1.80A {Synthetic construct} PDB: 4db9_A 4dba_A
Probab=99.19 E-value=1.5e-10 Score=88.56 Aligned_cols=134 Identities=20% Similarity=0.142 Sum_probs=107.2
Q ss_pred hhHHHHHHHhhcccCCHHHHHHHHHHHHHhc-cchhhHHHHHhcChHHHHHHHhhccchhhhhHHHHHHHHHhCcCCCC-
Q psy4705 17 EDVIKIYEANKDKVESDNTRELLARILNALA-SQQELRGLMVQQGASKALIHLAHNGTVKGKRQAAQGLARLGITLNPE- 94 (164)
Q Consensus 17 ~~vi~~l~v~l~k~~S~~~k~~~~~il~~Ls-~~~~~R~~ivqqGai~~Ll~l~~~gt~~~~~~A~~ALakLlIs~nP~- 94 (164)
+++.+.+ +.+.+++++.++..++..|.+++ .+++.+..+++.|+++.|+++...+.+..+..|+.+|.+|.......
T Consensus 11 ~~~~~~l-~~LL~s~~~~v~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~~~~ 89 (210)
T 4db6_A 11 GSELPQM-VQQLNSPDQQELQSALRKLSQIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQI 89 (210)
T ss_dssp --CHHHH-HHHTTCSCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHH
T ss_pred cchhHHH-HHHhcCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHcCCHHHHHHHHcCCCHHHHHHHHHHHHHHhcCCcHHH
Confidence 4566666 78999999999999999999999 66889999999999999999988888888899999999996432211
Q ss_pred cccCCCCcccchHHHHhccCCCcchHHHHHHHHHHHcccCCChHHHHHHHhccch--hHhhhh
Q psy4705 95 VAFPGERSLEVVRPLLSLLHPEATALETFEGLMALCNLAAIGEKQRQRKKLNFRP--FVSCLG 155 (164)
Q Consensus 95 l~f~~~~~~~av~pL~~LL~~~~~~l~~fEaLlALTNLAs~~~~~r~~Iv~~~~~--~~~~l~ 155 (164)
..+. ..++|++|+.+|. +.+..-+.+|+.+|.||+..+++.++.+++.+.. +++.|.
T Consensus 90 ~~i~---~~g~i~~L~~lL~-~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~ll~ 148 (210)
T 4db6_A 90 QAVI---DAGALPALVQLLS-SPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLS 148 (210)
T ss_dssp HHHH---HTTCHHHHHHHTT-CSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTT
T ss_pred HHHH---HCCCHHHHHHHHc-CCcHHHHHHHHHHHHHHHcCCHHHHHHHHHcCcHHHHHHHHc
Confidence 1111 2458999999998 5566667889999999998878888888887663 777665
No 20
>1jdh_A Beta-catenin; beta-catenin, protein-protein complex, transcription; 1.90A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qz7_A 1g3j_A 1th1_A* 1i7w_A* 1i7x_A 1jpp_A 1m1e_A 1v18_A* 3oux_A 3ouw_A 1jpw_A 3tx7_A* 2gl7_A 1t08_A 1luj_A 2bct_A 3bct_A* 3ifq_A* 3sla_A 3sl9_A
Probab=99.14 E-value=4.6e-10 Score=96.25 Aligned_cols=149 Identities=14% Similarity=0.049 Sum_probs=117.7
Q ss_pred hhHHHHHHHHHHhc----------ChhHHHHHHHhhcccC-CHHHHHHHHHHHHHhccchhhHHHHHhcChHHHHHHHhh
Q psy4705 2 LRRAATQTMTNMIV----------SEDVIKIYEANKDKVE-SDNTRELLARILNALASQQELRGLMVQQGASKALIHLAH 70 (164)
Q Consensus 2 ~~~aa~~~l~nli~----------~~~vi~~l~v~l~k~~-S~~~k~~~~~il~~Ls~~~~~R~~ivqqGai~~Ll~l~~ 70 (164)
.|..|++++.++.. .+|+++.+ +.+.+++ ++..+..+++.|.+|+.+++.+..+++.|+++.|+++.+
T Consensus 33 v~~~A~~~L~~l~~~~~~~~~~~~~~~~i~~L-v~~L~~~~~~~~~~~a~~~L~~ls~~~~~~~~i~~~g~i~~L~~lL~ 111 (529)
T 1jdh_A 33 VVNKAAVMVHQLSKKEASRHAIMRSPQMVSAI-VRTMQNTNDVETARCTAGTLHNLSHHREGLLAIFKSGGIPALVKMLG 111 (529)
T ss_dssp HHHHHHHHHHHHHTSHHHHHHHHTCHHHHHHH-HHHHHHCCCHHHHHHHHHHHHHHTTSHHHHHHHHHTTHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHcCCccHHHHHhCcchHHHH-HHHHhcCCCHHHHHHHHHHHHHHHcCchhHHHHHHcCCHHHHHHHHc
Confidence 47789999998854 34778877 6666554 788999999999999999999999999999999999988
Q ss_pred ccchhhhhHHHHHHHHHhCcCCC-CcccCCCCcccchHHHHhccCCCcchHHHHHHHHHHHcccCCChHHHHHHHhccch
Q psy4705 71 NGTVKGKRQAAQGLARLGITLNP-EVAFPGERSLEVVRPLLSLLHPEATALETFEGLMALCNLAAIGEKQRQRKKLNFRP 149 (164)
Q Consensus 71 ~gt~~~~~~A~~ALakLlIs~nP-~l~f~~~~~~~av~pL~~LL~~~~~~l~~fEaLlALTNLAs~~~~~r~~Iv~~~~~ 149 (164)
++.+..+..|+.+|.+|+...+. ...+. ..++||+|+.+|. +.+..-...+..+|+|++..+++.+..|++.+..
T Consensus 112 ~~~~~v~~~a~~~L~~l~~~~~~~~~~i~---~~g~i~~L~~ll~-~~~~~~~~~~~~~L~~la~~~~~~~~~i~~~~~i 187 (529)
T 1jdh_A 112 SPVDSVLFYAITTLHNLLLHQEGAKMAVR---LAGGLQKMVALLN-KTNVKFLAITTDCLQILAYGNQESKLIILASGGP 187 (529)
T ss_dssp CSCHHHHHHHHHHHHHHHHHCTTHHHHHH---HHTHHHHHHHGGG-CCCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHH
T ss_pred CCCHHHHHHHHHHHHHHhcCCcchHHHHH---HcCCHHHHHHHHh-cCCHHHHHHHHHHHHHHHhCCHHHHHHHHHCCCH
Confidence 88888889999999999876432 22221 2468999999998 4444445556779999998878889998887663
Q ss_pred --hHhhhh
Q psy4705 150 --FVSCLG 155 (164)
Q Consensus 150 --~~~~l~ 155 (164)
++++|+
T Consensus 188 ~~L~~ll~ 195 (529)
T 1jdh_A 188 QALVNIMR 195 (529)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 666554
No 21
>2jdq_A Importin alpha-1 subunit; transport, PB2 subunit, nuclear protein, protein transport, armadillo repeats; 2.2A {Homo sapiens} PDB: 3tj3_A
Probab=99.13 E-value=3.2e-09 Score=88.99 Aligned_cols=150 Identities=17% Similarity=0.123 Sum_probs=120.7
Q ss_pred hhHHHHHHHHHHhc----------ChhHHHHHHHhhcccCCHHHHHHHHHHHHHhccc-hhhHHHHHhcChHHHHHHHhh
Q psy4705 2 LRRAATQTMTNMIV----------SEDVIKIYEANKDKVESDNTRELLARILNALASQ-QELRGLMVQQGASKALIHLAH 70 (164)
Q Consensus 2 ~~~aa~~~l~nli~----------~~~vi~~l~v~l~k~~S~~~k~~~~~il~~Ls~~-~~~R~~ivqqGai~~Ll~l~~ 70 (164)
+|..|+.++.++.. ..|+++.+ +.+.+++++.+|+.++.+|.+++.+ ++.|..+++.|++..|+.+..
T Consensus 81 v~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L-~~lL~~~~~~vr~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~~l~ 159 (450)
T 2jdq_A 81 LQFESAWVLTNIASGNSLQTRIVIQAGAVPIF-IELLSSEFEDVQEQAVWALGNIAGDSTMCRDYVLDCNILPPLLQLFS 159 (450)
T ss_dssp HHHHHHHHHHHHHSSCHHHHHHHHHTTHHHHH-HHHTTCSCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTCHHHHHHHTT
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHhCCCHHHH-HHHHcCCCHHHHHHHHHHHHHHccCCHHHHHHHHHCCCHHHHHHHhc
Confidence 57889999999865 25888988 7888899999999999999999998 578999999999999999887
Q ss_pred c-cchhhhhHHHHHHHHHhCcCCCCcccCCCCcccchHHHHhccCCCcchHHHHHHHHHHHcccCCChHHHHHHHhccc-
Q psy4705 71 N-GTVKGKRQAAQGLARLGITLNPEVAFPGERSLEVVRPLLSLLHPEATALETFEGLMALCNLAAIGEKQRQRKKLNFR- 148 (164)
Q Consensus 71 ~-gt~~~~~~A~~ALakLlIs~nP~l~f~~~~~~~av~pL~~LL~~~~~~l~~fEaLlALTNLAs~~~~~r~~Iv~~~~- 148 (164)
+ ..+..+..|+.+|.+++...+|...+. ...+++|+|+.++. +.+..-..+++.+|.||+..+++.++.++..+.
T Consensus 160 ~~~~~~v~~~a~~~L~~l~~~~~~~~~~~--~~~~~l~~L~~~l~-~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i 236 (450)
T 2jdq_A 160 KQNRLTMTRNAVWALSNLCRGKSPPPEFA--KVSPCLNVLSWLLF-VSDTDVLADACWALSYLSDGPNDKIQAVIDAGVC 236 (450)
T ss_dssp SCCCHHHHHHHHHHHHHHHCCSSSCCCGG--GTGGGHHHHHHHTT-CCCHHHHHHHHHHHHHHTSSSHHHHHHHHHTTTH
T ss_pred CCCCHHHHHHHHHHHHHHhCCCCCCCCHH--HHHHHHHHHHHHHc-cCCHHHHHHHHHHHHHHHCCCcHHHHHHHHcCcH
Confidence 5 567788899999999988766654332 23679999999998 455556778999999999876666777766554
Q ss_pred h-hHhhhh
Q psy4705 149 P-FVSCLG 155 (164)
Q Consensus 149 ~-~~~~l~ 155 (164)
+ ++++|.
T Consensus 237 ~~L~~ll~ 244 (450)
T 2jdq_A 237 RRLVELLM 244 (450)
T ss_dssp HHHHHHTT
T ss_pred HHHHHHHC
Confidence 2 666554
No 22
>3l6x_A Catenin delta-1; catenin, armadillo, ARM, JMD, CE adhesion, complex, cell-CELL adhesion, ARVCF, delta-catenin DP120, JAC-1, cell membrane, membrane; 2.40A {Homo sapiens} PDB: 3l6y_A
Probab=99.12 E-value=1.1e-10 Score=106.13 Aligned_cols=133 Identities=13% Similarity=0.050 Sum_probs=108.8
Q ss_pred hhHHHHHHHhhcccCCHHHHHHHHHHHHHhcc-chhhHHHHHhcChHHHHHHHhhccchhhhhHHHHHHHHHhCcCCCC-
Q psy4705 17 EDVIKIYEANKDKVESDNTRELLARILNALAS-QQELRGLMVQQGASKALIHLAHNGTVKGKRQAAQGLARLGITLNPE- 94 (164)
Q Consensus 17 ~~vi~~l~v~l~k~~S~~~k~~~~~il~~Ls~-~~~~R~~ivqqGai~~Ll~l~~~gt~~~~~~A~~ALakLlIs~nP~- 94 (164)
.+.++.+ +.+.+++++.++..++..|.+||. ++++|..+++.||+++|+.+.+++.+..+..|+.||.+|+...|+.
T Consensus 47 ~~~i~~L-V~~L~s~~~~~q~~Aa~~L~~La~~~~~~k~~V~~~G~Ip~LV~LL~s~~~~vq~~Aa~AL~nLa~~~~~~n 125 (584)
T 3l6x_A 47 QPELPEV-IAMLGFRLDAVKSNAAAYLQHLCYRNDKVKTDVRKLKGIPVLVGLLDHPKKEVHLGACGALKNISFGRDQDN 125 (584)
T ss_dssp CCCHHHH-HHHTTCSCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHGGGCSSHHHHHHHHHHHHHHTSSSCHHH
T ss_pred cccHHHH-HHHHCCCCHHHHHHHHHHHHHHHcCChHHHHHHHHcCCcHHHHHHHCCCCHHHHHHHHHHHHHHHccCCHHH
Confidence 4568887 899999999999999999999995 7899999999999999999999998999999999999998854332
Q ss_pred -cccCCCCcccchHHHHhccCCCcchHHHHHHHHHHHcccCCChHHHHHHHhccch-hHhhh
Q psy4705 95 -VAFPGERSLEVVRPLLSLLHPEATALETFEGLMALCNLAAIGEKQRQRKKLNFRP-FVSCL 154 (164)
Q Consensus 95 -l~f~~~~~~~av~pL~~LL~~~~~~l~~fEaLlALTNLAs~~~~~r~~Iv~~~~~-~~~~l 154 (164)
... ...++||||+.||....+..-+..+..||.||++. ++.+..|++.+-+ |++.+
T Consensus 126 k~~I---~~~GaIp~LV~LL~s~~~~~~~e~aa~aL~nLS~~-~~~k~~I~~~alp~Lv~LL 183 (584)
T 3l6x_A 126 KIAI---KNCDGVPALVRLLRKARDMDLTEVITGTLWNLSSH-DSIKMEIVDHALHALTDEV 183 (584)
T ss_dssp HHHH---HHTTHHHHHHHHHHHCCSHHHHHHHHHHHHHHTTS-GGGHHHHHHHTHHHHHHHT
T ss_pred HHHH---HHcCCHHHHHHHHcCCCCHHHHHHHHHHHHHHhCC-chhhHHHHhccHHHHHHHH
Confidence 222 13569999999998434444466688999999874 6789999976654 77665
No 23
>4b8j_A Importin subunit alpha-1A; transport protein, nuclear localization signal; 2.00A {Oryza sativa japonica group} PDB: 4b8o_A 2yns_A 4b8p_A
Probab=99.12 E-value=1.2e-09 Score=94.92 Aligned_cols=149 Identities=20% Similarity=0.181 Sum_probs=118.5
Q ss_pred hhHHHHHHHHHHhcC----------hhHHHHHHHhhcccCCHHHHHHHHHHHHHhccc-hhhHHHHHhcChHHHHHHHh-
Q psy4705 2 LRRAATQTMTNMIVS----------EDVIKIYEANKDKVESDNTRELLARILNALASQ-QELRGLMVQQGASKALIHLA- 69 (164)
Q Consensus 2 ~~~aa~~~l~nli~~----------~~vi~~l~v~l~k~~S~~~k~~~~~il~~Ls~~-~~~R~~ivqqGai~~Ll~l~- 69 (164)
+|..|+.++.|+... .|+++.+ +.+.+++++.++++++.+|.+|+.+ ++.|..+++.|++..|+.+.
T Consensus 134 v~~~A~~~L~~l~~~~~~~~~~~~~~g~i~~L-~~lL~~~~~~v~~~a~~aL~~l~~~~~~~~~~i~~~g~l~~Ll~lL~ 212 (528)
T 4b8j_A 134 LQFEAAWALTNIASGTSENTKVVIDHGAVPIF-VKLLGSSSDDVREQAVWALGNVAGDSPKCRDLVLANGALLPLLAQLN 212 (528)
T ss_dssp HHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHH-HHHTTCSCHHHHHHHHHHHHHHHHTCHHHHHHHHHTTCHHHHHHTCC
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHhCCcHHHH-HHHhcCCCHHHHHHHHHHHHHHhCCChhhHHHHHHCCcHHHHHHHHh
Confidence 578899999998664 4788888 7888889999999999999999988 66899999999999999987
Q ss_pred hccchhhhhHHHHHHHHHhCcCCCCcccCCCCcccchHHHHhccCCCcchHHHHHHHHHHHcccCCChHHHHHHHhccch
Q psy4705 70 HNGTVKGKRQAAQGLARLGITLNPEVAFPGERSLEVVRPLLSLLHPEATALETFEGLMALCNLAAIGEKQRQRKKLNFRP 149 (164)
Q Consensus 70 ~~gt~~~~~~A~~ALakLlIs~nP~l~f~~~~~~~av~pL~~LL~~~~~~l~~fEaLlALTNLAs~~~~~r~~Iv~~~~~ 149 (164)
....+..+..|+.+|.+|+... |...+. ...+++++|+.+|+ +.+..-...++.+|.||+..+++..+.++..+..
T Consensus 213 ~~~~~~v~~~a~~~L~~L~~~~-~~~~~~--~~~~~l~~L~~lL~-~~~~~v~~~a~~aL~~l~~~~~~~~~~~~~~g~v 288 (528)
T 4b8j_A 213 EHTKLSMLRNATWTLSNFCRGK-PQPSFE--QTRPALPALARLIH-SNDEEVLTDACWALSYLSDGTNDKIQAVIEAGVC 288 (528)
T ss_dssp TTCCHHHHHHHHHHHHHHHCSS-SCCCHH--HHTTHHHHHHHHTT-CCCHHHHHHHHHHHHHHTSSCHHHHHHHHHTTCH
T ss_pred cCCCHHHHHHHHHHHHHHHcCC-CCCcHH--HHHHHHHHHHHHHC-CCCHHHHHHHHHHHHHHHcCCHHHHHHHHHcCHH
Confidence 4555677888999999998764 332221 13569999999998 4555567789999999998777666677776552
Q ss_pred --hHhhhh
Q psy4705 150 --FVSCLG 155 (164)
Q Consensus 150 --~~~~l~ 155 (164)
++++|.
T Consensus 289 ~~Lv~lL~ 296 (528)
T 4b8j_A 289 PRLVELLL 296 (528)
T ss_dssp HHHHHHTT
T ss_pred HHHHHHHc
Confidence 666664
No 24
>1xm9_A Plakophilin 1; armadillo repeat, cell adhesion; 2.80A {Homo sapiens} SCOP: a.118.1.24
Probab=99.11 E-value=9.8e-11 Score=101.86 Aligned_cols=130 Identities=15% Similarity=0.091 Sum_probs=106.4
Q ss_pred HHHHHHHhhcccCCHHHHHHHHHHHHHhccc-hhhHHHHHhcChHHHHHHHhhccchhhhhHHHHHHHHHhCcCCC-Ccc
Q psy4705 19 VIKIYEANKDKVESDNTRELLARILNALASQ-QELRGLMVQQGASKALIHLAHNGTVKGKRQAAQGLARLGITLNP-EVA 96 (164)
Q Consensus 19 vi~~l~v~l~k~~S~~~k~~~~~il~~Ls~~-~~~R~~ivqqGai~~Ll~l~~~gt~~~~~~A~~ALakLlIs~nP-~l~ 96 (164)
.++.+ +.+.+++++..++.++..|.+|+.+ +..|..+++.|+++.|+++.+++.+..+..|+.+|.+|+...++ ...
T Consensus 3 ~l~~l-v~~L~s~~~~~q~~A~~~L~~l~~~~~~~~~~i~~~g~i~~Lv~lL~s~~~~~~~~A~~aL~nLa~~~~~~k~~ 81 (457)
T 1xm9_A 3 TIPKA-VQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLE 81 (457)
T ss_dssp CHHHH-HHHHHSSCTHHHHHHHHHHHHHTSSCSSHHHHHHHTTHHHHHHHHTTSSCHHHHHHHHHHHHHHHSSCHHHHHH
T ss_pred CHHHH-HHHHCCCCHHHHHHHHHHHHHHHcCChHHHHHHHHcCCHHHHHHHHcCCCHHHHHHHHHHHHHHhcCCHHHHHH
Confidence 46776 7888899999999999999999965 45788999999999999999888888889999999999875222 222
Q ss_pred cCCCCcccchHHHHhccCCCcchHHHHHHHHHHHcccCCChHHHHHHHhccc--hhHhhh
Q psy4705 97 FPGERSLEVVRPLLSLLHPEATALETFEGLMALCNLAAIGEKQRQRKKLNFR--PFVSCL 154 (164)
Q Consensus 97 f~~~~~~~av~pL~~LL~~~~~~l~~fEaLlALTNLAs~~~~~r~~Iv~~~~--~~~~~l 154 (164)
+ ...++||||+.+|..+++..-++++.-+|.||++. ++.|..|++ |. +++.+|
T Consensus 82 i---~~~G~i~~Lv~lL~~~~~~~~~~~a~~aL~nLa~~-~~~~~~i~~-g~i~~Lv~ll 136 (457)
T 1xm9_A 82 T---RRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSST-DELKEELIA-DALPVLADRV 136 (457)
T ss_dssp H---HHTTCHHHHHHHHTTCCCHHHHHHHHHHHHHHHTS-SSTHHHHHH-HHHHHHHHHT
T ss_pred H---HHcCCHHHHHHHHhhCCCHHHHHHHHHHHHHHhcC-HHhHHHHHh-ccHHHHHHHH
Confidence 2 12469999999998455556688999999999987 678999998 66 388888
No 25
>1wa5_B Importin alpha subunit; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1un0_A 2c1t_A 1bk5_A 1ee5_A 1bk6_A 1ee4_A
Probab=99.11 E-value=1.5e-09 Score=94.57 Aligned_cols=150 Identities=17% Similarity=0.158 Sum_probs=121.9
Q ss_pred hhHHHHHHHHHHhcC----------hhHHHHHHHhhcccCCHHHHHHHHHHHHHhccc-hhhHHHHHhcChHHHHHHHhh
Q psy4705 2 LRRAATQTMTNMIVS----------EDVIKIYEANKDKVESDNTRELLARILNALASQ-QELRGLMVQQGASKALIHLAH 70 (164)
Q Consensus 2 ~~~aa~~~l~nli~~----------~~vi~~l~v~l~k~~S~~~k~~~~~il~~Ls~~-~~~R~~ivqqGai~~Ll~l~~ 70 (164)
+|..|+.++.|+... .|+++.+ +.+.+++++.+|++++.+|.+|+.+ ++.|..+++.|++..|+.+..
T Consensus 147 v~~~A~~~L~~l~~~~~~~~~~~~~~g~i~~L-v~lL~~~~~~vr~~A~~aL~~l~~~~~~~~~~~~~~~~l~~L~~ll~ 225 (530)
T 1wa5_B 147 LQLEAAWALTNIASGTSAQTKVVVDADAVPLF-IQLLYTGSVEVKEQAIWALGNVAGDSTDYRDYVLQCNAMEPILGLFN 225 (530)
T ss_dssp HHHHHHHHHHHHTTSCHHHHHHHHHTTCHHHH-HHHHHHCCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTCHHHHHHGGG
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHCCCHHHH-HHHHcCCCHHHHHHHHHHHHHHhCCCccchHHHHHcCcHHHHHHHhc
Confidence 578899999998653 5778888 7888889999999999999999988 678999999999999999888
Q ss_pred ccchhhhhHHHHHHHHHhCcCCCCcccCCCCcccchHHHHhccCCCcchHHHHHHHHHHHcccCCChHHHHHHHhccch-
Q psy4705 71 NGTVKGKRQAAQGLARLGITLNPEVAFPGERSLEVVRPLLSLLHPEATALETFEGLMALCNLAAIGEKQRQRKKLNFRP- 149 (164)
Q Consensus 71 ~gt~~~~~~A~~ALakLlIs~nP~l~f~~~~~~~av~pL~~LL~~~~~~l~~fEaLlALTNLAs~~~~~r~~Iv~~~~~- 149 (164)
......+..|+.+|.+|+...+|...+. ...+++|+|+.+|. +.+..-...++.+|.||+..+++.++.+++.+..
T Consensus 226 ~~~~~v~~~a~~~L~~L~~~~~~~~~~~--~~~~~l~~L~~lL~-~~d~~v~~~a~~~L~~L~~~~~~~~~~~~~~~~v~ 302 (530)
T 1wa5_B 226 SNKPSLIRTATWTLSNLCRGKKPQPDWS--VVSQALPTLAKLIY-SMDTETLVDACWAISYLSDGPQEAIQAVIDVRIPK 302 (530)
T ss_dssp SCCHHHHHHHHHHHHHHHCCSSSCCCHH--HHGGGHHHHHHHTT-CCCHHHHHHHHHHHHHHHSSCHHHHHHHHHTTCHH
T ss_pred cCCHHHHHHHHHHHHHHhCCCCCCCcHH--HHHhHHHHHHHHHc-CCCHHHHHHHHHHHHHHhCCCHHHHHHHHhcCcHH
Confidence 7667788889999999988776654332 23569999999998 4555567789999999998777777777776552
Q ss_pred -hHhhhh
Q psy4705 150 -FVSCLG 155 (164)
Q Consensus 150 -~~~~l~ 155 (164)
++++|.
T Consensus 303 ~Lv~lL~ 309 (530)
T 1wa5_B 303 RLVELLS 309 (530)
T ss_dssp HHHHGGG
T ss_pred HHHHHHC
Confidence 666654
No 26
>2z6h_A Catenin beta-1, beta-catenin; C-terminal domain, activator, alternative splicing, cell adhesion, cytoplasm, cytoskeleton, disease mutation, nucleus; 2.20A {Homo sapiens}
Probab=99.08 E-value=1.1e-09 Score=98.21 Aligned_cols=149 Identities=15% Similarity=0.052 Sum_probs=118.2
Q ss_pred hhHHHHHHHHHHhc----------ChhHHHHHHHhhcccC-CHHHHHHHHHHHHHhccchhhHHHHHhcChHHHHHHHhh
Q psy4705 2 LRRAATQTMTNMIV----------SEDVIKIYEANKDKVE-SDNTRELLARILNALASQQELRGLMVQQGASKALIHLAH 70 (164)
Q Consensus 2 ~~~aa~~~l~nli~----------~~~vi~~l~v~l~k~~-S~~~k~~~~~il~~Ls~~~~~R~~ivqqGai~~Ll~l~~ 70 (164)
+|+.|+.++.++.. .+++++.+ +.+.+++ ++.++..+++.|.+|+.+++.|..+++.|++..|+++..
T Consensus 30 vr~~A~~~L~~La~~~~~~~~i~~~~~~i~~L-v~~L~~~~~~~~~~~A~~~L~~Ls~~~~~~~~i~~~g~i~~Lv~lL~ 108 (644)
T 2z6h_A 30 VVNKAAVMVHQLSKKEASRHAIMRSPQMVSAI-VRTMQNTNDVETARCTAGTLHNLSHHREGLLAIFKSGGIPALVKMLG 108 (644)
T ss_dssp HHHHHHHHHHHHHTSTTHHHHHTTCHHHHHHH-HHHHHSCCCHHHHHHHHHHHHHHTTSHHHHHHHHTTTHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHCCChhHHHHHhccChHHHH-HHHHhcCCCHHHHHHHHHHHHHHhcChhhHHHHHHcCCHHHHHHHHh
Confidence 57889999999954 34778887 6666654 789999999999999999999999999999999999988
Q ss_pred ccchhhhhHHHHHHHHHhCcCCCCc-ccCCCCcccchHHHHhccCCCcchHHHHHHHHHHHcccCCChHHHHHHHhccch
Q psy4705 71 NGTVKGKRQAAQGLARLGITLNPEV-AFPGERSLEVVRPLLSLLHPEATALETFEGLMALCNLAAIGEKQRQRKKLNFRP 149 (164)
Q Consensus 71 ~gt~~~~~~A~~ALakLlIs~nP~l-~f~~~~~~~av~pL~~LL~~~~~~l~~fEaLlALTNLAs~~~~~r~~Iv~~~~~ 149 (164)
+..+..+..|+.+|.+|+...++.. .+ ...++||+|+.+|. +.+...+..++.+|+||++.+++.+..|++.+..
T Consensus 109 ~~~~~v~~~A~~aL~nL~~~~~~~~~~v---~~~g~i~~Lv~lL~-~~~~~~~~~a~~~L~~La~~~~~~~~~i~~~g~v 184 (644)
T 2z6h_A 109 SPVDSVLFYAITTLHNLLLHQEGAKMAV---RLAGGLQKMVALLN-KTNVKFLAITTDCLQILAYGNQESKLIILASGGP 184 (644)
T ss_dssp CSSHHHHHHHHHHHHHHHHHSTTHHHHH---HHTTHHHHHHHGGG-CCCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHH
T ss_pred CCCHHHHHHHHHHHHHHHhCcchhHHHH---HHCCChHHHHHHHC-cCCHHHHHHHHHHHHHHHhcCcHHHHHHHHcCCh
Confidence 8888889999999999987764432 11 12468999999998 3443333445669999998778889999888763
Q ss_pred --hHhhhh
Q psy4705 150 --FVSCLG 155 (164)
Q Consensus 150 --~~~~l~ 155 (164)
++++|+
T Consensus 185 ~~Lv~lL~ 192 (644)
T 2z6h_A 185 QALVNIMR 192 (644)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHHH
Confidence 666665
No 27
>3now_A UNC-45 protein, SD10334P; armadillo repeat, HSP90, myosin, tetra-tricopeptide repeat, binding protein required for myosin function; 2.99A {Drosophila melanogaster}
Probab=99.03 E-value=5.7e-10 Score=104.80 Aligned_cols=146 Identities=12% Similarity=0.058 Sum_probs=119.6
Q ss_pred HHHHHHHHHHhc----------ChhHHHHHHHhhcccCCHHHHHHHHHHHHHhccchhhHHHHHh-cChHHHHHHHhhcc
Q psy4705 4 RAATQTMTNMIV----------SEDVIKIYEANKDKVESDNTRELLARILNALASQQELRGLMVQ-QGASKALIHLAHNG 72 (164)
Q Consensus 4 ~aa~~~l~nli~----------~~~vi~~l~v~l~k~~S~~~k~~~~~il~~Ls~~~~~R~~ivq-qGai~~Ll~l~~~g 72 (164)
..|..++.|+.. .+|+++.+ +.+..++++.+++.+++++.||+..++.+..++. .|+++.|+.+....
T Consensus 599 ~eAl~AL~NLa~~~d~~~~~Ii~aG~l~~L-v~LL~s~~~~Vq~~A~~~L~NLa~~~~~~~~~v~~~g~l~~Lv~LL~s~ 677 (810)
T 3now_A 599 FESLMALTNLASMNESVRQRIIKEQGVSKI-EYYLMEDHLYLTRAAAQCLCNLVMSEDVIKMFEGNNDRVKFLALLCEDE 677 (810)
T ss_dssp HHHHHHHHHHTTSCHHHHHHHHHTTHHHHH-HHHHHSCCTTHHHHHHHHHHHHTTSHHHHHHHHSSSSHHHHHHHGGGCS
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHcCCHHHH-HHHHcCCCHHHHHHHHHHHHHHhCChHHHHHHHhccCcHHHHHHHhcCC
Confidence 357788888854 35788888 7888889999999999999999999999999996 79999999998887
Q ss_pred chhhhhHHHHHHHHHhCcCCCC---cccCCCCcccchHHHHhccCCCcchHHHHHHHHHHHcccCCChHHHHHHHhccc-
Q psy4705 73 TVKGKRQAAQGLARLGITLNPE---VAFPGERSLEVVRPLLSLLHPEATALETFEGLMALCNLAAIGEKQRQRKKLNFR- 148 (164)
Q Consensus 73 t~~~~~~A~~ALakLlIs~nP~---l~f~~~~~~~av~pL~~LL~~~~~~l~~fEaLlALTNLAs~~~~~r~~Iv~~~~- 148 (164)
....+..|+.||++|... +|. .++. ..+.||||+.||. +++..-+.+|+.||.|+++.+++.++.|++.|.
T Consensus 678 d~~vq~~Aa~ALanLt~~-s~~~~~~ii~---~~g~I~~Lv~LL~-s~d~~vq~~A~~aL~NL~~~s~e~~~~l~e~G~i 752 (810)
T 3now_A 678 DEETATACAGALAIITSV-SVKCCEKILA---IASWLDILHTLIA-NPSPAVQHRGIVIILNMINAGEEIAKKLFETDIM 752 (810)
T ss_dssp SHHHHHHHHHHHHHHHHH-CHHHHHHHHT---STTHHHHHHHHHT-CSSHHHHHHHHHHHHHHHTTCHHHHHHHHTSTHH
T ss_pred CHHHHHHHHHHHHHHhCC-CHHHHHHHHH---HcCCHHHHHHHHC-CCCHHHHHHHHHHHHHHHhCCHHHHHHHHHCCCH
Confidence 778888999999999753 222 2332 1468999999998 566677888999999999887888999998877
Q ss_pred -hhHhhhh
Q psy4705 149 -PFVSCLG 155 (164)
Q Consensus 149 -~~~~~l~ 155 (164)
++++++.
T Consensus 753 ~~L~~LL~ 760 (810)
T 3now_A 753 ELLSGLGQ 760 (810)
T ss_dssp HHHTTSCC
T ss_pred HHHHHHHh
Confidence 3777664
No 28
>3tpo_A Importin subunit alpha-2; nuclear import, protein transport; 2.10A {Mus musculus} PDB: 1qgk_B 1qgr_B
Probab=99.01 E-value=9.3e-10 Score=96.80 Aligned_cols=150 Identities=13% Similarity=0.085 Sum_probs=118.0
Q ss_pred hhHHHHHHHHHH----------hcChhHHHHHHHhhcccCCHHHHHHHHHHHHHhcc-chhhHHHHHhcChHHHHHHHhh
Q psy4705 2 LRRAATQTMTNM----------IVSEDVIKIYEANKDKVESDNTRELLARILNALAS-QQELRGLMVQQGASKALIHLAH 70 (164)
Q Consensus 2 ~~~aa~~~l~nl----------i~~~~vi~~l~v~l~k~~S~~~k~~~~~il~~Ls~-~~~~R~~ivqqGai~~Ll~l~~ 70 (164)
++..|+.+++++ +...|+++.+ +.+.+++++.++..+.+++.+++. +++.+..++..|++..|+.+..
T Consensus 267 v~~~a~~aL~~l~~~~~~~~~~v~~~g~i~~L-v~lL~~~~~~v~~~a~~aL~nl~~~~~~~~~~i~~~g~l~~L~~LL~ 345 (529)
T 3tpo_A 267 VLADSCWAISYLTDGPNERIEMVVKKGVVPQL-VKLLGATELPIVTPALRAIGNIVTGTDEQTQKVIDAGALAVFPSLLT 345 (529)
T ss_dssp HHHHHHHHHHHHHSSCHHHHHHHHTTTCHHHH-HHHHTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTGGGGHHHHTT
T ss_pred HHHHHHHHHHHhhhhhhhhHHHHHhccchHHH-HHHhcCCChhHHHHHHHHHHHHHccchHHHHHHhhcccHHHHHHHHc
Confidence 356777888876 4567888888 899999999999999999999976 5778899999999999999998
Q ss_pred ccchhhhhHHHHHHHHHhCcCCCCcccCCCCcccchHHHHhccCCCcchHHHHHHHHHHHcccCCC-hHHHHHHHhccc-
Q psy4705 71 NGTVKGKRQAAQGLARLGITLNPEVAFPGERSLEVVRPLLSLLHPEATALETFEGLMALCNLAAIG-EKQRQRKKLNFR- 148 (164)
Q Consensus 71 ~gt~~~~~~A~~ALakLlIs~nP~l~f~~~~~~~av~pL~~LL~~~~~~l~~fEaLlALTNLAs~~-~~~r~~Iv~~~~- 148 (164)
+..+..+..|+.+|.+|+......... ....+++|||+.+|. +++..-+.||..||+||++.. ++.+..+++.|.
T Consensus 346 ~~~~~i~~~a~~aL~nl~~~~~~~~~~--v~~~g~i~~Lv~lL~-~~~~~v~~~A~~aL~nl~~~~~~~~~~~l~~~g~i 422 (529)
T 3tpo_A 346 NPKTNIQKEATWTMSNITAGRQDQIQQ--VVNHGLVPFLVGVLS-KADFKTQKAAAWAITNYTSGGTVEQIVYLVHCGII 422 (529)
T ss_dssp CSSHHHHHHHHHHHHHHHTSCHHHHHH--HHHTTHHHHHHHHHH-SSCHHHHHHHHHHHHHHHHHSCHHHHHHHHHTTCH
T ss_pred CCCHHHHHHHHHHHHHHhcccHHHHHH--HHhcCcHHHHHHHhc-CCCHHHHHHHHHHHHHHHcCCCHHHHHHHHHCcCH
Confidence 888888999999999996543221111 012458999999998 555556788999999998753 466777888877
Q ss_pred -hhHhhhh
Q psy4705 149 -PFVSCLG 155 (164)
Q Consensus 149 -~~~~~l~ 155 (164)
+|+++|.
T Consensus 423 ~~L~~LL~ 430 (529)
T 3tpo_A 423 EPLMNLLS 430 (529)
T ss_dssp HHHHHGGG
T ss_pred HHHHHHhc
Confidence 3777664
No 29
>2z6g_A B-catenin; FULL-length, beta-catenin, cell adhesion; 3.40A {Danio rerio}
Probab=99.00 E-value=3.2e-09 Score=98.22 Aligned_cols=149 Identities=14% Similarity=0.056 Sum_probs=118.5
Q ss_pred hhHHHHHHHHHHhc----------ChhHHHHHHHhhcccC-CHHHHHHHHHHHHHhccchhhHHHHHhcChHHHHHHHhh
Q psy4705 2 LRRAATQTMTNMIV----------SEDVIKIYEANKDKVE-SDNTRELLARILNALASQQELRGLMVQQGASKALIHLAH 70 (164)
Q Consensus 2 ~~~aa~~~l~nli~----------~~~vi~~l~v~l~k~~-S~~~k~~~~~il~~Ls~~~~~R~~ivqqGai~~Ll~l~~ 70 (164)
+|+.|+.++.++.. .+++++.+ +.+.+.+ ++.+|..+++.|.+|+.+++++..+++.|+++.|+++.+
T Consensus 166 vr~~A~~~L~~L~~~~~~~~~i~~~~~~i~~L-v~~L~~~~d~~vr~~Aa~aL~~Ls~~~~~~~~i~~~g~I~~Lv~lL~ 244 (780)
T 2z6g_A 166 VVNKAAVMVHQLSKKEASRHAIMRSPQMVSAI-VRTMQNTNDVETARCTSGTLHNLSHHREGLLAIFKSGGIPALVNMLG 244 (780)
T ss_dssp HHHHHHHHHHHHHTSHHHHHHHTTCHHHHHHH-HHHHHHCCCHHHHHHHHHHHHHHHTSHHHHHHHHHTTHHHHHHHHTT
T ss_pred HHHHHHHHHHHHhCCChhHHHHHhccChHHHH-HHHHcCCCCHHHHHHHHHHHHHHhCCchhHHHHHHcCCHHHHHHHHc
Confidence 58899999999965 45788887 6666655 899999999999999999999999999999999999998
Q ss_pred ccchhhhhHHHHHHHHHhCcCCCCc-ccCCCCcccchHHHHhccCCCcchHHHHHHHHHHHcccCCChHHHHHHHhccch
Q psy4705 71 NGTVKGKRQAAQGLARLGITLNPEV-AFPGERSLEVVRPLLSLLHPEATALETFEGLMALCNLAAIGEKQRQRKKLNFRP 149 (164)
Q Consensus 71 ~gt~~~~~~A~~ALakLlIs~nP~l-~f~~~~~~~av~pL~~LL~~~~~~l~~fEaLlALTNLAs~~~~~r~~Iv~~~~~ 149 (164)
++.+..+..|+.+|.+|+....... .+ ...++|++|+.+|. +.+..-...++.+|.||+..+++.|..|++.+..
T Consensus 245 ~~~~~v~~~A~~aL~nLa~~~~~~~~~v---~~~g~v~~Lv~lL~-~~~~~v~~~a~~aL~~La~~~~e~~~~i~~~~~i 320 (780)
T 2z6g_A 245 SPVDSVLFHAITTLHNLLLHQEGAKMAV---RLAGGLQKMVALLN-KTNVKFLAITTDCLQILAYGNQESKLIILASGGP 320 (780)
T ss_dssp CSCHHHHHHHHHHHHHHHHHSTTHHHHH---HHTTHHHHHHHGGG-CCCHHHHHHHHHHHHHHHTTCHHHHHHHHTTTHH
T ss_pred CCCHHHHHHHHHHHHHHhCCChhhHHHH---HHcCCHHHHHHHHh-cCCHHHHHHHHHHHHHHhcCChHHHHHHHHcCCH
Confidence 8888889999999999987643221 11 12468999999998 3443334457778999998778889888887663
Q ss_pred --hHhhhh
Q psy4705 150 --FVSCLG 155 (164)
Q Consensus 150 --~~~~l~ 155 (164)
++.+|+
T Consensus 321 ~~Lv~lL~ 328 (780)
T 2z6g_A 321 QALVNIMR 328 (780)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHHh
Confidence 666665
No 30
>1xqr_A HSPBP1 protein; armadillo repeat, superhelical twist, chaperone; 2.10A {Homo sapiens} SCOP: a.118.1.21 PDB: 1xqs_A*
Probab=98.97 E-value=3.4e-09 Score=88.48 Aligned_cols=131 Identities=18% Similarity=0.138 Sum_probs=104.2
Q ss_pred hhHHHHHHHHHHh----------cChhHHHHHHHhhcccC-CHHHHHHHHHHHHHhccc-hhhHHHHHhcChHHHHHHHh
Q psy4705 2 LRRAATQTMTNMI----------VSEDVIKIYEANKDKVE-SDNTRELLARILNALASQ-QELRGLMVQQGASKALIHLA 69 (164)
Q Consensus 2 ~~~aa~~~l~nli----------~~~~vi~~l~v~l~k~~-S~~~k~~~~~il~~Ls~~-~~~R~~ivqqGai~~Ll~l~ 69 (164)
+|..|+.++.|+. +..|++++| +.+.+++ ++.+|+.++.+|-+++.+ +.....+++.||++.|+.+.
T Consensus 98 vr~~Aa~~Lg~ia~~n~~~~~~vv~~g~l~~L-l~LL~~~~~~~v~~~A~~ALsnl~~~~~~~~~~~~~~ggi~~L~~lL 176 (296)
T 1xqr_A 98 LRWRAAQLIGTCSQNVAAIQEQVLGLGALRKL-LRLLDRDACDTVRVKALFAISCLVREQEAGLLQFLRLDGFSVLMRAM 176 (296)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHH-HHHHHHCSCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHCCCHHHH-HHHHccCCCHHHHHHHHHHHHHHHcCCcHHHHHHHHCCCHHHHHHHH
Confidence 5788999999884 345888988 6777764 789999999999999975 55677888999999999999
Q ss_pred hccchhhhhHHHHHHHHHhCcCCCCc--ccCCCCcccchHHHHhccCCCcchHHHHHHHHHHHcccCCChH
Q psy4705 70 HNGTVKGKRQAAQGLARLGITLNPEV--AFPGERSLEVVRPLLSLLHPEATALETFEGLMALCNLAAIGEK 138 (164)
Q Consensus 70 ~~gt~~~~~~A~~ALakLlIs~nP~l--~f~~~~~~~av~pL~~LL~~~~~~l~~fEaLlALTNLAs~~~~ 138 (164)
+++..+.+..|+.+|++++.. +|.. .| ...++||||+.||.. .+..-+..++.||.||++..+.
T Consensus 177 ~~~d~~v~~~A~~aLs~L~~~-~~~~~~~v---v~~g~i~~Lv~LL~~-~d~~v~~~al~aL~~l~~~~~~ 242 (296)
T 1xqr_A 177 QQQVQKLKVKSAFLLQNLLVG-HPEHKGTL---CSMGMVQQLVALVRT-EHSPFHEHVLGALCSLVTDFPQ 242 (296)
T ss_dssp HSSCHHHHHHHHHHHHHHHHH-CGGGHHHH---HHTTHHHHHHHHHTS-CCSTHHHHHHHHHHHHHTTCHH
T ss_pred cCCCHHHHHHHHHHHHHHHhC-ChHHHHHH---HHcCCHHHHHHHHcC-CChhHHHHHHHHHHHHHhCChh
Confidence 888888899999999999776 4432 12 134699999999984 3444456699999999987543
No 31
>1jdh_A Beta-catenin; beta-catenin, protein-protein complex, transcription; 1.90A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qz7_A 1g3j_A 1th1_A* 1i7w_A* 1i7x_A 1jpp_A 1m1e_A 1v18_A* 3oux_A 3ouw_A 1jpw_A 3tx7_A* 2gl7_A 1t08_A 1luj_A 2bct_A 3bct_A* 3ifq_A* 3sla_A 3sl9_A
Probab=98.93 E-value=2.4e-08 Score=85.50 Aligned_cols=146 Identities=13% Similarity=0.009 Sum_probs=114.6
Q ss_pred hHHHHHHHHHHhc----------ChhHHHHHHHhhcccCC-HHHHHHHHHHHHHhccchhhHHHHHhcChHHHHHHHhhc
Q psy4705 3 RRAATQTMTNMIV----------SEDVIKIYEANKDKVES-DNTRELLARILNALASQQELRGLMVQQGASKALIHLAHN 71 (164)
Q Consensus 3 ~~aa~~~l~nli~----------~~~vi~~l~v~l~k~~S-~~~k~~~~~il~~Ls~~~~~R~~ivqqGai~~Ll~l~~~ 71 (164)
+.+++.+++|+.. ..|+++.+ +.+.++++ +..++.+.+++.+|+.++++|..+++.|++..|+++...
T Consensus 160 ~~~~~~~L~~la~~~~~~~~~i~~~~~i~~L-~~ll~~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~g~~~~L~~ll~~ 238 (529)
T 1jdh_A 160 LAITTDCLQILAYGNQESKLIILASGGPQAL-VNIMRTYTYEKLLWTTSRVLKVLSVCSSNKPAIVEAGGMQALGLHLTD 238 (529)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHTTHHHHH-HHHHHHCCCHHHHHHHHHHHHHHTTSTTHHHHHHHTTHHHHHHTTTTS
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHCCCHHHH-HHHHHhCChHHHHHHHHHHHHHHhcCcccHHHHHHCCCHHHHHHHHhC
Confidence 5677788888753 34677777 66666654 566778899999999999999999999999999998887
Q ss_pred cchhhhhHHHHHHHHHhCcCCCCcccCCCCcccchHHHHhccCCCcchHHHHHHHHHHHcccCCChHHHHHHHhccch--
Q psy4705 72 GTVKGKRQAAQGLARLGITLNPEVAFPGERSLEVVRPLLSLLHPEATALETFEGLMALCNLAAIGEKQRQRKKLNFRP-- 149 (164)
Q Consensus 72 gt~~~~~~A~~ALakLlIs~nP~l~f~~~~~~~av~pL~~LL~~~~~~l~~fEaLlALTNLAs~~~~~r~~Iv~~~~~-- 149 (164)
+.+..+..++.+|.++.-...+.. ...+++|+|+.+|+ +.+..-+..+..+|.||+..+++.++.+.+.+..
T Consensus 239 ~~~~~~~~a~~~L~~l~~~~~~~~-----~~~~~i~~L~~ll~-~~~~~v~~~a~~~L~~L~~~~~~~~~~~~~~~~v~~ 312 (529)
T 1jdh_A 239 PSQRLVQNCLWTLRNLSDAATKQE-----GMEGLLGTLVQLLG-SDDINVVTCAAGILSNLTCNNYKNKMMVCQVGGIEA 312 (529)
T ss_dssp SCHHHHHHHHHHHHHHHTTCTTCS-----CCHHHHHHHHHHTT-CSCHHHHHHHHHHHHHHTTTCHHHHHHHHHTTHHHH
T ss_pred CChHHHHHHHHHHHHHhcCChhhH-----HHHhHHHHHHHHHc-CCCHHHHHHHHHHHHHHhcCCHHHHHHHHHcCChHH
Confidence 777778889999999976543321 13468999999998 4555557779999999998877888888887662
Q ss_pred hHhhhh
Q psy4705 150 FVSCLG 155 (164)
Q Consensus 150 ~~~~l~ 155 (164)
+++.|.
T Consensus 313 L~~ll~ 318 (529)
T 1jdh_A 313 LVRTVL 318 (529)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 666664
No 32
>2jdq_A Importin alpha-1 subunit; transport, PB2 subunit, nuclear protein, protein transport, armadillo repeats; 2.2A {Homo sapiens} PDB: 3tj3_A
Probab=98.90 E-value=2.3e-08 Score=83.78 Aligned_cols=150 Identities=15% Similarity=0.128 Sum_probs=117.1
Q ss_pred hhHHHHHHHHHHhcC----------hhHHHHHHHhhcccCCHHHHHHHHHHHHHhccc-hhhHHHHHhcChHHHHHHHhh
Q psy4705 2 LRRAATQTMTNMIVS----------EDVIKIYEANKDKVESDNTRELLARILNALASQ-QELRGLMVQQGASKALIHLAH 70 (164)
Q Consensus 2 ~~~aa~~~l~nli~~----------~~vi~~l~v~l~k~~S~~~k~~~~~il~~Ls~~-~~~R~~ivqqGai~~Ll~l~~ 70 (164)
+|++|+.++.|+... .++++.+ +.+.+.+++.++..++.+|.+|+.. ++.+..++..|+++.|+++..
T Consensus 166 v~~~a~~~L~~l~~~~~~~~~~~~~~~~l~~L-~~~l~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~ll~ 244 (450)
T 2jdq_A 166 MTRNAVWALSNLCRGKSPPPEFAKVSPCLNVL-SWLLFVSDTDVLADACWALSYLSDGPNDKIQAVIDAGVCRRLVELLM 244 (450)
T ss_dssp HHHHHHHHHHHHHCCSSSCCCGGGTGGGHHHH-HHHTTCCCHHHHHHHHHHHHHHTSSSHHHHHHHHHTTTHHHHHHHTT
T ss_pred HHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHH-HHHHccCCHHHHHHHHHHHHHHHCCCcHHHHHHHHcCcHHHHHHHHC
Confidence 588999999999754 4788988 7888888999999999999999986 567888889999999999888
Q ss_pred ccchhhhhHHHHHHHHHhCcCCCCcccCCCCcccchHHHHhccCCCcchHHHHHHHHHHHcccCCChHHHHHHHhccc-h
Q psy4705 71 NGTVKGKRQAAQGLARLGITLNPEVAFPGERSLEVVRPLLSLLHPEATALETFEGLMALCNLAAIGEKQRQRKKLNFR-P 149 (164)
Q Consensus 71 ~gt~~~~~~A~~ALakLlIs~nP~l~f~~~~~~~av~pL~~LL~~~~~~l~~fEaLlALTNLAs~~~~~r~~Iv~~~~-~ 149 (164)
...+..+..|+.+|.++.-..+..... ....+++++|+.+|. +.+..-+.+|+.+|.|++..+++..+.+++.+. +
T Consensus 245 ~~~~~v~~~a~~~L~~l~~~~~~~~~~--~~~~~~l~~L~~ll~-~~~~~vr~~a~~~L~~l~~~~~~~~~~~~~~~~l~ 321 (450)
T 2jdq_A 245 HNDYKVVSPALRAVGNIVTGDDIQTQV--ILNCSALQSLLHLLS-SPKESIKKEACWTISNITAGNRAQIQTVIDANIFP 321 (450)
T ss_dssp CSCHHHHHHHHHHHHHHTTSCHHHHHH--HHTTTHHHHHHHHTT-CSSHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHH
T ss_pred CCchhHHHHHHHHHHHHhhCChHHHHH--HHHCccHHHHHHHHc-CCCHHHHHHHHHHHHHHHcCCHHHHHHHHHCCCHH
Confidence 777788888999999996543322110 011358999999998 455566788999999999877777777776554 2
Q ss_pred -hHhhhh
Q psy4705 150 -FVSCLG 155 (164)
Q Consensus 150 -~~~~l~ 155 (164)
+++.|.
T Consensus 322 ~L~~~l~ 328 (450)
T 2jdq_A 322 ALISILQ 328 (450)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 555543
No 33
>2z6h_A Catenin beta-1, beta-catenin; C-terminal domain, activator, alternative splicing, cell adhesion, cytoplasm, cytoskeleton, disease mutation, nucleus; 2.20A {Homo sapiens}
Probab=98.90 E-value=2.5e-08 Score=89.44 Aligned_cols=147 Identities=13% Similarity=0.015 Sum_probs=115.5
Q ss_pred hhHHHHHHHHHHhc----------ChhHHHHHHHhhcccCC-HHHHHHHHHHHHHhccchhhHHHHHhcChHHHHHHHhh
Q psy4705 2 LRRAATQTMTNMIV----------SEDVIKIYEANKDKVES-DNTRELLARILNALASQQELRGLMVQQGASKALIHLAH 70 (164)
Q Consensus 2 ~~~aa~~~l~nli~----------~~~vi~~l~v~l~k~~S-~~~k~~~~~il~~Ls~~~~~R~~ivqqGai~~Ll~l~~ 70 (164)
++.+++++++|+.. ..|+++.+ +.+.++++ +..++.++++|.+|+.++++|..+++.|++..|+++..
T Consensus 156 ~~~~a~~~L~~La~~~~~~~~~i~~~g~v~~L-v~lL~~~~~~~~~~~a~~~L~nLs~~~~~~~~l~~~g~l~~L~~ll~ 234 (644)
T 2z6h_A 156 FLAITTDCLQILAYGNQESKLIILASGGPQAL-VNIMRTYTYEKLLWTTSRVLKVLSVCSSNKPAIVEAGGMQALGLHLT 234 (644)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHH-HHHHTTCCCHHHHHHHHHHHHHHTTCTTHHHHHHHTTHHHHHHTTTT
T ss_pred HHHHHHHHHHHHHhcCcHHHHHHHHcCChHHH-HHHHHcCChHHHHHHHHHHHHHHhcCcccHHHHHHCCCHHHHHHHHh
Confidence 35677888988864 35677877 67666654 67789999999999999999999999999999999888
Q ss_pred ccchhhhhHHHHHHHHHhCcCCCCcccCCCCcccchHHHHhccCCCcchHHHHHHHHHHHcccCCChHHHHHHHhccch-
Q psy4705 71 NGTVKGKRQAAQGLARLGITLNPEVAFPGERSLEVVRPLLSLLHPEATALETFEGLMALCNLAAIGEKQRQRKKLNFRP- 149 (164)
Q Consensus 71 ~gt~~~~~~A~~ALakLlIs~nP~l~f~~~~~~~av~pL~~LL~~~~~~l~~fEaLlALTNLAs~~~~~r~~Iv~~~~~- 149 (164)
.+....+..++.+|.+++-... ... ...+++++|+.+|+ +.+..-+..|..+|.||+..+++.++.+++.+..
T Consensus 235 ~~~~~~~~~a~~~L~nL~~~~~-~~~----~~~~~i~~Lv~lL~-~~d~~v~~~a~~aL~~L~~~~~~~~~~v~~~g~v~ 308 (644)
T 2z6h_A 235 DPSQRLVQNCLWTLRNLSDAAT-KQE----GMEGLLGTLVQLLG-SDDINVVTCAAGILSNLTCNNYKNKMMVCQVGGIE 308 (644)
T ss_dssp CSCHHHHHHHHHHHHHHGGGCT-TCC----SCHHHHHHHHHHTT-CSCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHH
T ss_pred cCCHHHHHHHHHHHHHHhhcch-hhh----hhhhHHHHHHHHHc-CCCHHHHHHHHHHHHHHHcCCHHHHHHHHHcCCHH
Confidence 7777788889999999965432 211 23469999999998 4454556679999999998877888888887652
Q ss_pred -hHhhhh
Q psy4705 150 -FVSCLG 155 (164)
Q Consensus 150 -~~~~l~ 155 (164)
++++|.
T Consensus 309 ~Lv~lL~ 315 (644)
T 2z6h_A 309 ALVRTVL 315 (644)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 666654
No 34
>4b8j_A Importin subunit alpha-1A; transport protein, nuclear localization signal; 2.00A {Oryza sativa japonica group} PDB: 4b8o_A 2yns_A 4b8p_A
Probab=98.90 E-value=1.5e-08 Score=88.01 Aligned_cols=151 Identities=16% Similarity=0.081 Sum_probs=119.1
Q ss_pred hhHHHHHHHHHHhcC---------hhHHHHHHHhhcccCCHHHHHHHHHHHHHhccchhhH-HHHHhcChHHHHHHHhhc
Q psy4705 2 LRRAATQTMTNMIVS---------EDVIKIYEANKDKVESDNTRELLARILNALASQQELR-GLMVQQGASKALIHLAHN 71 (164)
Q Consensus 2 ~~~aa~~~l~nli~~---------~~vi~~l~v~l~k~~S~~~k~~~~~il~~Ls~~~~~R-~~ivqqGai~~Ll~l~~~ 71 (164)
+++.|+.++.|+... .++++.+ +.+.+.+++.++..+..+|.+|+...+.+ ..++..|++..|+++...
T Consensus 219 v~~~a~~~L~~L~~~~~~~~~~~~~~~l~~L-~~lL~~~~~~v~~~a~~aL~~l~~~~~~~~~~~~~~g~v~~Lv~lL~~ 297 (528)
T 4b8j_A 219 MLRNATWTLSNFCRGKPQPSFEQTRPALPAL-ARLIHSNDEEVLTDACWALSYLSDGTNDKIQAVIEAGVCPRLVELLLH 297 (528)
T ss_dssp HHHHHHHHHHHHHCSSSCCCHHHHTTHHHHH-HHHTTCCCHHHHHHHHHHHHHHTSSCHHHHHHHHHTTCHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHcCCCCCcHHHHHHHHHHH-HHHHCCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHcCHHHHHHHHHcC
Confidence 578899999999776 5788988 78889999999999999999999886654 677888999999999888
Q ss_pred cchhhhhHHHHHHHHHhCcCCCCcccCCCCcccchHHHHhccCCCcchHHHHHHHHHHHcccCCChHHHHHHHhccc-h-
Q psy4705 72 GTVKGKRQAAQGLARLGITLNPEVAFPGERSLEVVRPLLSLLHPEATALETFEGLMALCNLAAIGEKQRQRKKLNFR-P- 149 (164)
Q Consensus 72 gt~~~~~~A~~ALakLlIs~nP~l~f~~~~~~~av~pL~~LL~~~~~~l~~fEaLlALTNLAs~~~~~r~~Iv~~~~-~- 149 (164)
..+..+..|+.+|++|....+..... ....+++|+|+.+|..+.+..-+.+|+.+|.||+..+++..+.++..+. +
T Consensus 298 ~~~~v~~~a~~~L~nl~~~~~~~~~~--~~~~~~l~~L~~lL~~~~~~~v~~~A~~~L~nl~~~~~~~~~~~~~~~~i~~ 375 (528)
T 4b8j_A 298 PSPSVLIPALRTVGNIVTGDDAQTQC--IIDHQALPCLLSLLTQNLKKSIKKEACWTISNITAGNKDQIQAVINAGIIGP 375 (528)
T ss_dssp SCHHHHHHHHHHHHHHTTSCHHHHHH--HHTTTHHHHHHHHHHSCCCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTCHHH
T ss_pred CChhHHHHHHHHHHHHHcCCHHHHHH--HHHhhhHHHHHHHHcCCCcHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHH
Confidence 88888899999999997644322111 0124589999999984325566788999999999877777777777655 2
Q ss_pred hHhhhh
Q psy4705 150 FVSCLG 155 (164)
Q Consensus 150 ~~~~l~ 155 (164)
++++|.
T Consensus 376 L~~lL~ 381 (528)
T 4b8j_A 376 LVNLLQ 381 (528)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 666654
No 35
>2z6g_A B-catenin; FULL-length, beta-catenin, cell adhesion; 3.40A {Danio rerio}
Probab=98.89 E-value=3e-08 Score=91.72 Aligned_cols=146 Identities=13% Similarity=0.016 Sum_probs=115.5
Q ss_pred hHHHHHHHHHHh----------cChhHHHHHHHhhcccCC-HHHHHHHHHHHHHhccchhhHHHHHhcChHHHHHHHhhc
Q psy4705 3 RRAATQTMTNMI----------VSEDVIKIYEANKDKVES-DNTRELLARILNALASQQELRGLMVQQGASKALIHLAHN 71 (164)
Q Consensus 3 ~~aa~~~l~nli----------~~~~vi~~l~v~l~k~~S-~~~k~~~~~il~~Ls~~~~~R~~ivqqGai~~Ll~l~~~ 71 (164)
++.|+.++.++. ...+.++.+ +.+.+.++ +..++.+++++.+|+.++++|..+++.|++..|+.+...
T Consensus 293 ~~~a~~aL~~La~~~~e~~~~i~~~~~i~~L-v~lL~~~~~~~~~~~a~~aL~~Ls~~~~~~~~i~~~g~l~~Ll~lL~~ 371 (780)
T 2z6g_A 293 LAITTDCLQILAYGNQESKLIILASGGPQAL-VNIMRTYTYEKLLWTTSRVLKVLSVCSSNKPAIVEAGGMQALGLHLTD 371 (780)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHTTTHHHHH-HHHHTTCCCHHHHHHHHHHHHHHHTSTTHHHHHHHTTHHHHHGGGTTC
T ss_pred HHHHHHHHHHHhcCChHHHHHHHHcCCHHHH-HHHHhcCCHHHHHHHHHHHHHHhhcChHHHHHHHHhchHHHHHHHHcC
Confidence 567777888775 445777877 67777665 556778899999999999999999999999999998888
Q ss_pred cchhhhhHHHHHHHHHhCcCCCCcccCCCCcccchHHHHhccCCCcchHHHHHHHHHHHcccCCChHHHHHHHhccch--
Q psy4705 72 GTVKGKRQAAQGLARLGITLNPEVAFPGERSLEVVRPLLSLLHPEATALETFEGLMALCNLAAIGEKQRQRKKLNFRP-- 149 (164)
Q Consensus 72 gt~~~~~~A~~ALakLlIs~nP~l~f~~~~~~~av~pL~~LL~~~~~~l~~fEaLlALTNLAs~~~~~r~~Iv~~~~~-- 149 (164)
+....+..|+.+|.+|.-...+.. ...+++++|+.+|+ +.+..-+..|+.+|.||+..+++.++.+++.+..
T Consensus 372 ~~~~~~~~a~~~L~~L~~~~~~~~-----~~~~~i~~Lv~lL~-~~d~~vr~~A~~aL~~L~~~~~~~~~~i~~~g~i~~ 445 (780)
T 2z6g_A 372 PSQRLVQNCLWTLRNLSDAATKQE-----GMEGLLGTLVQLLG-SDDINVVTCAAGILSNLTCNNYKNKMMVCQVGGIEA 445 (780)
T ss_dssp SCHHHHHHHHHHHHHHHTTCTTCS-----CCHHHHHHHHHHTT-CSCHHHHHHHHHHHHHHTSSCHHHHHHHHTTTHHHH
T ss_pred CchHHHHHHHHHHHHHhccchhhh-----hhhhHHHHHHHHHc-CCCHHHHHHHHHHHHHHHhCCHHHHHHHHHCCCHHH
Confidence 777788889999999976654421 12469999999998 4444556779999999998888888888887652
Q ss_pred hHhhhh
Q psy4705 150 FVSCLG 155 (164)
Q Consensus 150 ~~~~l~ 155 (164)
+++.|.
T Consensus 446 Lv~lL~ 451 (780)
T 2z6g_A 446 LVRTVL 451 (780)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 666664
No 36
>3ul1_B Importin subunit alpha-2; arm repeat, armadillo repeat, nuclear transport, nuclear LOC signal binding, importin beta binding; 1.90A {Mus musculus} PDB: 3ukx_B 3uky_B 3ukz_B 3ukw_B 3ul0_B 3oqs_A 3rz9_A 3rzx_A 3uvu_A 1q1s_C 1q1t_C 3knd_A 1ejy_I 1iq1_C 1ejl_I 1pjn_B 1pjm_B 3q5u_A 3fey_C 3fex_C ...
Probab=98.87 E-value=2.1e-08 Score=88.02 Aligned_cols=149 Identities=14% Similarity=0.081 Sum_probs=115.8
Q ss_pred hHHHHHHHHHHhcC----------hhHHHHHHHhhcccCCHHHHHHHHHHHHHhccchhh-HHHHHhcChHHHHHHHhhc
Q psy4705 3 RRAATQTMTNMIVS----------EDVIKIYEANKDKVESDNTRELLARILNALASQQEL-RGLMVQQGASKALIHLAHN 71 (164)
Q Consensus 3 ~~aa~~~l~nli~~----------~~vi~~l~v~l~k~~S~~~k~~~~~il~~Ls~~~~~-R~~ivqqGai~~Ll~l~~~ 71 (164)
.|.++.++.|+..+ +++++.+ +.+.+++++.++..++.+|.+|+...+. ...++..|+++.|+++...
T Consensus 207 ~~~a~~~L~nl~~~~~~~~~~~~~~~~lp~L-~~LL~~~~~~v~~~A~~aL~~L~~~~~~~~~~i~~~g~i~~Lv~lL~~ 285 (510)
T 3ul1_B 207 LRNLTWTLSNLCRNKNPAPPLDAVEQILPTL-VRLLHHNDPEVLADSCWAISYLTDGPNERIEMVVKKGVVPQLVKLLGA 285 (510)
T ss_dssp HHHHHHHHHHHHCCCSSCCCHHHHHHHHHHH-HHHTTCSCHHHHHHHHHHHHHHTSSCHHHHHHHHTTTCHHHHHHHHTC
T ss_pred HHHHHHHHHHHhhcccchhHHHHHHhHHHHH-HHHHhcCCHHHHHHHHHHHHHHhhchhhhHHHHHhcccchhhhhhhcC
Confidence 57788899998654 5778887 7889999999999999999999988655 4566788999999999888
Q ss_pred cchhhhhHHHHHHHHHhCcCCCCcccCCCCcccchHHHHhccCCCcchHHHHHHHHHHHcccCCChHHHHHHHhccch--
Q psy4705 72 GTVKGKRQAAQGLARLGITLNPEVAFPGERSLEVVRPLLSLLHPEATALETFEGLMALCNLAAIGEKQRQRKKLNFRP-- 149 (164)
Q Consensus 72 gt~~~~~~A~~ALakLlIs~nP~l~f~~~~~~~av~pL~~LL~~~~~~l~~fEaLlALTNLAs~~~~~r~~Iv~~~~~-- 149 (164)
.....+..|+.+|.+|....+.....- ...+++++|+.||. +.+..-+.+|..+|.||+..+++.++.++..+..
T Consensus 286 ~~~~v~~~al~aL~nl~~~~~~~~~~i--~~~g~l~~L~~LL~-~~~~~v~~~A~~aL~nl~a~~~~~~~~v~~~g~i~~ 362 (510)
T 3ul1_B 286 TELPIVTPALRAIGNIVTGTDEQTQKV--IDAGALAVFPSLLT-NPKTNIQKEATWTMSNITAGRQDQIQQVVNHGLVPF 362 (510)
T ss_dssp SCHHHHHHHHHHHHHHTTSCHHHHHHH--HHTTGGGGCC-CTT-CSSHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHH
T ss_pred CChhhhhHHHHHHHHhhcCCHHHHHHH--hhccchHHHHHHhc-CCCHHHHHHHHHHHHHHHcCcHHHHHHHHhcCCHHH
Confidence 888888889999999965443221100 12458999999998 4555567789999999999888888888887662
Q ss_pred hHhhhh
Q psy4705 150 FVSCLG 155 (164)
Q Consensus 150 ~~~~l~ 155 (164)
++++|.
T Consensus 363 Lv~lL~ 368 (510)
T 3ul1_B 363 LVGVLS 368 (510)
T ss_dssp HHHHHH
T ss_pred HHHHHc
Confidence 666664
No 37
>1wa5_B Importin alpha subunit; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1un0_A 2c1t_A 1bk5_A 1ee5_A 1bk6_A 1ee4_A
Probab=98.80 E-value=6.9e-08 Score=84.05 Aligned_cols=150 Identities=18% Similarity=0.100 Sum_probs=117.2
Q ss_pred hhHHHHHHHHHHhcCh----------hHHHHHHHhhcccCCHHHHHHHHHHHHHhccc-hhhHHHHHhcChHHHHHHHhh
Q psy4705 2 LRRAATQTMTNMIVSE----------DVIKIYEANKDKVESDNTRELLARILNALASQ-QELRGLMVQQGASKALIHLAH 70 (164)
Q Consensus 2 ~~~aa~~~l~nli~~~----------~vi~~l~v~l~k~~S~~~k~~~~~il~~Ls~~-~~~R~~ivqqGai~~Ll~l~~ 70 (164)
++++|+.++.|+.... ++++.+ +.+.+.+++.++..+..+|.+|+.. ++.+..++..|++..|+++..
T Consensus 231 v~~~a~~~L~~L~~~~~~~~~~~~~~~~l~~L-~~lL~~~d~~v~~~a~~~L~~L~~~~~~~~~~~~~~~~v~~Lv~lL~ 309 (530)
T 1wa5_B 231 LIRTATWTLSNLCRGKKPQPDWSVVSQALPTL-AKLIYSMDTETLVDACWAISYLSDGPQEAIQAVIDVRIPKRLVELLS 309 (530)
T ss_dssp HHHHHHHHHHHHHCCSSSCCCHHHHGGGHHHH-HHHTTCCCHHHHHHHHHHHHHHHSSCHHHHHHHHHTTCHHHHHHGGG
T ss_pred HHHHHHHHHHHHhCCCCCCCcHHHHHhHHHHH-HHHHcCCCHHHHHHHHHHHHHHhCCCHHHHHHHHhcCcHHHHHHHHC
Confidence 5789999999998654 788888 7888888999999999999999976 566788888999999999888
Q ss_pred ccchhhhhHHHHHHHHHhCcCCCCcccCCCCcccchHHHHhccCCCcchHHHHHHHHHHHcccCCChHHHHHHHhccc-h
Q psy4705 71 NGTVKGKRQAAQGLARLGITLNPEVAFPGERSLEVVRPLLSLLHPEATALETFEGLMALCNLAAIGEKQRQRKKLNFR-P 149 (164)
Q Consensus 71 ~gt~~~~~~A~~ALakLlIs~nP~l~f~~~~~~~av~pL~~LL~~~~~~l~~fEaLlALTNLAs~~~~~r~~Iv~~~~-~ 149 (164)
...+..+..|..+|.+|....+..... ....+++++|+.+|. +.+..-+.+|+.+|.|++..+++..+.++..+. +
T Consensus 310 ~~~~~v~~~a~~~L~~l~~~~~~~~~~--~~~~~~l~~L~~lL~-~~~~~vr~~A~~aL~~l~~~~~~~~~~~~~~~~l~ 386 (530)
T 1wa5_B 310 HESTLVQTPALRAVGNIVTGNDLQTQV--VINAGVLPALRLLLS-SPKENIKKEACWTISNITAGNTEQIQAVIDANLIP 386 (530)
T ss_dssp CSCHHHHHHHHHHHHHHTTSCHHHHHH--HHHTTHHHHHHHHTT-CSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTCHH
T ss_pred CCChhhHHHHHHHHHHHHcCCHHHHHH--HHHcchHHHHHHHHc-CCCHHHHHHHHHHHHHHHcCCHHHHHHHHHCCCHH
Confidence 777888888999999996543221110 011358999999998 445566788999999999877777777776655 2
Q ss_pred -hHhhhh
Q psy4705 150 -FVSCLG 155 (164)
Q Consensus 150 -~~~~l~ 155 (164)
++++|.
T Consensus 387 ~L~~lL~ 393 (530)
T 1wa5_B 387 PLVKLLE 393 (530)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 666553
No 38
>3opb_A SWI5-dependent HO expression protein 4; heat and arm fold, myosin folding and function, myosin bindi protein, protein binding; 2.90A {Saccharomyces cerevisiae}
Probab=98.62 E-value=2e-07 Score=87.18 Aligned_cols=150 Identities=15% Similarity=0.083 Sum_probs=112.8
Q ss_pred hhHHHHHHHHHHhcC------------hhHHHHHHHhhcc--cCCH------------HHHHHHHHHHHHhccch-----
Q psy4705 2 LRRAATQTMTNMIVS------------EDVIKIYEANKDK--VESD------------NTRELLARILNALASQQ----- 50 (164)
Q Consensus 2 ~~~aa~~~l~nli~~------------~~vi~~l~v~l~k--~~S~------------~~k~~~~~il~~Ls~~~----- 50 (164)
.|..|++++.++..+ .++++++ +.+.. .+++ -.+-.+...|.||+..+
T Consensus 517 ~k~~AA~ALArLlis~np~~~f~~~~~~~aI~pL-v~LL~~~~~~~~~~l~~~~~~~~l~~feAL~ALTNLAs~~~n~~E 595 (778)
T 3opb_A 517 IRILGCRALTRMLIFTNPGLIFKKYSALNAIPFL-FELLPRSTPVDDNPLHNDEQIKLTDNYEALLALTNLASSETSDGE 595 (778)
T ss_dssp HHHHHHHHHHHHHHTSCHHHHSSSSCSTTHHHHH-HHTSCCSSSCSSCC---CCCCCHHHHHHHHHHHHHHHHCCSHHHH
T ss_pred HHHHHHHHHHHHHhcCCHHHHcCCCccccchHHH-HHHcCCCCCcccccccccccccHHHHHHHHHHHHHHhcCCcccch
Confidence 578999999998532 3888998 78876 3322 23667789999999986
Q ss_pred hhHHHHHhc-ChHHHHHHHhhccchhhhhHHHHHHHHHhCcCCCCc----ccCCCCc--ccchHHHHhccCCCcchHHHH
Q psy4705 51 ELRGLMVQQ-GASKALIHLAHNGTVKGKRQAAQGLARLGITLNPEV----AFPGERS--LEVVRPLLSLLHPEATALETF 123 (164)
Q Consensus 51 ~~R~~ivqq-Gai~~Ll~l~~~gt~~~~~~A~~ALakLlIs~nP~l----~f~~~~~--~~av~pL~~LL~~~~~~l~~f 123 (164)
+.|..|+++ |+++.|.++..+..+..++.|.+.+++|.. +|.. .|..... ..-+++|+.|++ ..+...+-
T Consensus 596 ~~r~~Ii~~~ga~~~L~~LL~s~n~~VrrAA~elI~NL~~--~~e~i~~k~~~~~~~~~~~rL~lLV~Ll~-s~D~~~r~ 672 (778)
T 3opb_A 596 EVCKHIVSTKVYWSTIENLMLDENVPLQRSTLELISNMMS--HPLTIAAKFFNLENPQSLRNFNILVKLLQ-LSDVESQR 672 (778)
T ss_dssp HHHHHHHHSHHHHHHHHHGGGCSSHHHHHHHHHHHHHHHT--SGGGTGGGTSCCSSHHHHHHHHHHHHGGG-CSCHHHHH
T ss_pred HHHHHHHHhcCHHHHHHHHHhCCCHHHHHHHHHHHHHHhC--CcHHHHHHHHhhcCchhhccHHHHHHHHc-CCCHHHHH
Confidence 458999995 999999998888888889999999999975 5542 3433211 123889999998 56666677
Q ss_pred HHHHHHHcccCCChHHHHHHHhcc-c--hhHhhhh
Q psy4705 124 EGLMALCNLAAIGEKQRQRKKLNF-R--PFVSCLG 155 (164)
Q Consensus 124 EaLlALTNLAs~~~~~r~~Iv~~~-~--~~~~~l~ 155 (164)
.|.-||.|+++.++.+++.|++.. + .+++.+.
T Consensus 673 AAagALAnLts~~~~ia~~ll~~~~gi~~Ll~lL~ 707 (778)
T 3opb_A 673 AVAAIFANIATTIPLIAKELLTKKELIENAIQVFA 707 (778)
T ss_dssp HHHHHHHHHHHHCHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCChHHHHHHHHccccHHHHHHHHh
Confidence 799999999877788899999973 3 2454443
No 39
>4gmo_A Putative uncharacterized protein; ARM, heat, solenoid, nuclear transport, chaperone, RPL5, RPL KAP104, nucleus; 2.10A {Chaetomium thermophilum var} PDB: 4gmn_A
Probab=97.70 E-value=2.1e-05 Score=71.80 Aligned_cols=136 Identities=10% Similarity=0.101 Sum_probs=99.2
Q ss_pred hhHHHHHHHhhcccCCHHHHHHHHHHHHHhccchhhHHHHHhcChHHHHHH-HhhccchhhhhHHHHHHHHHhCcCCCCc
Q psy4705 17 EDVIKIYEANKDKVESDNTRELLARILNALASQQELRGLMVQQGASKALIH-LAHNGTVKGKRQAAQGLARLGITLNPEV 95 (164)
Q Consensus 17 ~~vi~~l~v~l~k~~S~~~k~~~~~il~~Ls~~~~~R~~ivqqGai~~Ll~-l~~~gt~~~~~~A~~ALakLlIs~nP~l 95 (164)
+.+.|.+ ...++.+++.|+.+...|.+|+.|++.|..+.++|++..++. +........+..|+.+|.+|.+...+..
T Consensus 34 ~~i~Pll--~~L~S~~~~~r~~A~~al~~l~~~~~~~~l~~~~~~v~~ll~~lL~D~~~~Vr~~A~gaLrnL~~~~g~d~ 111 (684)
T 4gmo_A 34 DKILPVL--KDLKSPDAKSRTTAAGAIANIVQDAKCRKLLLREQVVHIVLTETLTDNNIDSRAAGWEILKVLAQEEEADF 111 (684)
T ss_dssp HTTHHHH--HHHSSSCCSHHHHHHHHHHHHTTSHHHHHHHHHTTHHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHSCHHH
T ss_pred hhHHHHH--HHcCCCCHHHHHHHHHHHHHHHcCcHHHHHHHHcCCHHHHHHHHcCCCCHHHHHHHHHHHHHHHhhcCchH
Confidence 3455554 556888899999999999999999999999999999998776 4555567788889999999999887754
Q ss_pred ccCCCCcccchHHHHhccCCCcch-------------------HHH-HHHHHHHHcccCCChHHHHHHHhccc--hhHhh
Q psy4705 96 AFPGERSLEVVRPLLSLLHPEATA-------------------LET-FEGLMALCNLAAIGEKQRQRKKLNFR--PFVSC 153 (164)
Q Consensus 96 ~f~~~~~~~av~pL~~LL~~~~~~-------------------l~~-fEaLlALTNLAs~~~~~r~~Iv~~~~--~~~~~ 153 (164)
.-. ....++++||..+++...+. .+. -.++-.|.||+..+++..+.|...+. .++..
T Consensus 112 ~~~-l~~~~il~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lL~~L~e~s~~~~~~v~~~~~l~~l~~~ 190 (684)
T 4gmo_A 112 CVH-LYRLDVLTAIEHAAKAVLETLTTSEPPFSKLLKAQQRLVWDITGSLLVLIGLLALARDEIHEAVATKQTILRLLFR 190 (684)
T ss_dssp HHH-HHHTTHHHHHHHHHHHHHHHHHCBTTBGGGSCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHTCHHHHHHHHH
T ss_pred HHH-HHHcChHHHHHHHHHhhHHHHhhhccccccccHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhcccHHHHHHH
Confidence 210 01245899999988521110 011 13667889999888888888887755 26666
Q ss_pred hh
Q psy4705 154 LG 155 (164)
Q Consensus 154 l~ 155 (164)
|.
T Consensus 191 L~ 192 (684)
T 4gmo_A 191 LI 192 (684)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 40
>3ltm_A Alpha-REP4; protein engineering, heat-like repeat, protein binding; HET: 1PE 12P; 2.15A {Synthetic}
Probab=97.57 E-value=0.0031 Score=47.67 Aligned_cols=44 Identities=23% Similarity=0.223 Sum_probs=24.7
Q ss_pred hhHHHHHHHHHHhcChhHHHHHHHhhcccCCHHHHHHHHHHHHHhc
Q psy4705 2 LRRAATQTMTNMIVSEDVIKIYEANKDKVESDNTRELLARILNALA 47 (164)
Q Consensus 2 ~~~aa~~~l~nli~~~~vi~~l~v~l~k~~S~~~k~~~~~il~~Ls 47 (164)
.|+.|++.+..+- .++.++.+ ..+.+.+++.+|..+++.|..+.
T Consensus 35 vR~~A~~~L~~~~-~~~~~~~L-~~~l~~~~~~vr~~a~~aL~~~~ 78 (211)
T 3ltm_A 35 VRRAAAYALGKIG-DERAVEPL-IKALKDEDAWVRRAAADALGQIG 78 (211)
T ss_dssp HHHHHHHHHHHHC-CGGGHHHH-HHHTTCSCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhC-CccHHHHH-HHHHcCCCHHHHHHHHHHHHhhC
Confidence 3555666665543 24555555 45555556666666666665554
No 41
>3ltj_A Alpharep-4; protein engineering, heat-like repeat, protein binding; 1.80A {Synthetic}
Probab=97.53 E-value=0.0042 Score=46.63 Aligned_cols=44 Identities=23% Similarity=0.223 Sum_probs=24.7
Q ss_pred hhHHHHHHHHHHhcChhHHHHHHHhhcccCCHHHHHHHHHHHHHhc
Q psy4705 2 LRRAATQTMTNMIVSEDVIKIYEANKDKVESDNTRELLARILNALA 47 (164)
Q Consensus 2 ~~~aa~~~l~nli~~~~vi~~l~v~l~k~~S~~~k~~~~~il~~Ls 47 (164)
.|++|.+++..+- .++.++.+ ..+.+.+++.+|..+++.|..+.
T Consensus 30 vr~~A~~~L~~~~-~~~~~~~L-~~~l~~~~~~vr~~a~~~L~~~~ 73 (201)
T 3ltj_A 30 VRRAAAYALGKIG-DERAVEPL-IKALKDEDAWVRRAAADALGQIG 73 (201)
T ss_dssp HHHHHHHHHHHHC-CGGGHHHH-HHHTTCSSHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHhcC-ChhHHHHH-HHHHcCCCHHHHHHHHHHHHhhC
Confidence 3556666666543 33555555 45555566666666666665543
No 42
>1oyz_A Hypothetical protein YIBA; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.10A {Escherichia coli} SCOP: a.118.1.16
Probab=97.52 E-value=0.0018 Score=51.20 Aligned_cols=109 Identities=14% Similarity=0.136 Sum_probs=69.3
Q ss_pred hhHHHHHHHHHHhc-----ChhHHHHHHHhhcccCCHHHHHHHHHHHHHhccchhhHHHHHhcChHHHHHHHhhccchhh
Q psy4705 2 LRRAATQTMTNMIV-----SEDVIKIYEANKDKVESDNTRELLARILNALASQQELRGLMVQQGASKALIHLAHNGTVKG 76 (164)
Q Consensus 2 ~~~aa~~~l~nli~-----~~~vi~~l~v~l~k~~S~~~k~~~~~il~~Ls~~~~~R~~ivqqGai~~Ll~l~~~gt~~~ 76 (164)
.|++|+.++.++.. .+.+++.+ ....+..++.+|..++..+..+.. .+++..|+.+.....+..
T Consensus 107 vr~~a~~aL~~l~~~~~~~~~~~~~~L-~~~l~d~~~~vR~~a~~aL~~~~~----------~~~~~~L~~~l~d~~~~v 175 (280)
T 1oyz_A 107 VRATAIESTAQRCKKNPIYSPKIVEQS-QITAFDKSTNVRRATAFAISVIND----------KATIPLLINLLKDPNGDV 175 (280)
T ss_dssp HHHHHHHHHHHHHHHCGGGHHHHHHHH-HHHTTCSCHHHHHHHHHHHHTC-------------CCHHHHHHHHTCSSHHH
T ss_pred HHHHHHHHHHHHhccCCcccHHHHHHH-HHHhhCCCHHHHHHHHHHHHhcCC----------HHHHHHHHHHHcCCCHHH
Confidence 45666666666642 34566665 455566677777777766665543 246777777766666667
Q ss_pred hhHHHHHHHHHhCcCCCCcccCCCCcccchHHHHhccCCCcchHHHHHHHHHHHccc
Q psy4705 77 KRQAAQGLARLGITLNPEVAFPGERSLEVVRPLLSLLHPEATALETFEGLMALCNLA 133 (164)
Q Consensus 77 ~~~A~~ALakLlIs~nP~l~f~~~~~~~av~pL~~LL~~~~~~l~~fEaLlALTNLA 133 (164)
+..|+++|+++.. ...+++++|..+++ +.+..-+.+|+.+|.++.
T Consensus 176 r~~a~~aL~~~~~-----------~~~~~~~~L~~~l~-d~~~~vR~~A~~aL~~~~ 220 (280)
T 1oyz_A 176 RNWAAFAININKY-----------DNSDIRDCFVEMLQ-DKNEEVRIEAIIGLSYRK 220 (280)
T ss_dssp HHHHHHHHHHHTC-----------CCHHHHHHHHHHTT-CSCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhhcc-----------CcHHHHHHHHHHhc-CCCHHHHHHHHHHHHHhC
Confidence 7778888888731 11346778888876 555555667777777775
No 43
>3ltj_A Alpharep-4; protein engineering, heat-like repeat, protein binding; 1.80A {Synthetic}
Probab=97.42 E-value=0.0017 Score=48.86 Aligned_cols=106 Identities=22% Similarity=0.239 Sum_probs=85.6
Q ss_pred hhHHHHHHHHHHhcChhHHHHHHHhhcccCCHHHHHHHHHHHHHhccchhhHHHHHhcChHHHHHHHhhccchhhhhHHH
Q psy4705 2 LRRAATQTMTNMIVSEDVIKIYEANKDKVESDNTRELLARILNALASQQELRGLMVQQGASKALIHLAHNGTVKGKRQAA 81 (164)
Q Consensus 2 ~~~aa~~~l~nli~~~~vi~~l~v~l~k~~S~~~k~~~~~il~~Ls~~~~~R~~ivqqGai~~Ll~l~~~gt~~~~~~A~ 81 (164)
.|++|++++..+- .+++++.+ ..+.+..++.+|..+++.|..+... .++..|+.+..+..+..+..|+
T Consensus 61 vr~~a~~~L~~~~-~~~~~~~L-~~~l~d~~~~vr~~a~~aL~~~~~~----------~~~~~L~~~l~d~~~~vr~~a~ 128 (201)
T 3ltj_A 61 VRRAAADALGQIG-DERAVEPL-IKALKDEDGWVRQSAAVALGQIGDE----------RAVEPLIKALKDEDWFVRIAAA 128 (201)
T ss_dssp HHHHHHHHHHHHC-CGGGHHHH-HHHTTCSSHHHHHHHHHHHHHHCCG----------GGHHHHHHHTTCSSHHHHHHHH
T ss_pred HHHHHHHHHHhhC-CHHHHHHH-HHHHcCCCHHHHHHHHHHHHHhCcH----------HHHHHHHHHHcCCCHHHHHHHH
Confidence 5788899988764 56788887 6777888999999999999887543 4778888877777778889999
Q ss_pred HHHHHHhCcCCCCcccCCCCcccchHHHHhccCCCcchHHHHHHHHHHHccc
Q psy4705 82 QGLARLGITLNPEVAFPGERSLEVVRPLLSLLHPEATALETFEGLMALCNLA 133 (164)
Q Consensus 82 ~ALakLlIs~nP~l~f~~~~~~~av~pL~~LL~~~~~~l~~fEaLlALTNLA 133 (164)
++|+++. + .+++++|..+++ +.+..-+.+|+.||.++.
T Consensus 129 ~aL~~~~---~----------~~~~~~L~~~l~-d~~~~vr~~A~~aL~~~~ 166 (201)
T 3ltj_A 129 FALGEIG---D----------ERAVEPLIKALK-DEDGWVRQSAADALGEIG 166 (201)
T ss_dssp HHHHHHT---C----------GGGHHHHHHHTT-CSSHHHHHHHHHHHHHHC
T ss_pred HHHHHhC---C----------HHHHHHHHHHHc-CCCHHHHHHHHHHHHHhC
Confidence 9999983 1 347889999998 666667888999999985
No 44
>3ltm_A Alpha-REP4; protein engineering, heat-like repeat, protein binding; HET: 1PE 12P; 2.15A {Synthetic}
Probab=97.41 E-value=0.0036 Score=47.32 Aligned_cols=105 Identities=22% Similarity=0.236 Sum_probs=55.4
Q ss_pred hHHHHHHHHHHhcChhHHHHHHHhhcccCCHHHHHHHHHHHHHhccchhhHHHHHhcChHHHHHHHhhccchhhhhHHHH
Q psy4705 3 RRAATQTMTNMIVSEDVIKIYEANKDKVESDNTRELLARILNALASQQELRGLMVQQGASKALIHLAHNGTVKGKRQAAQ 82 (164)
Q Consensus 3 ~~aa~~~l~nli~~~~vi~~l~v~l~k~~S~~~k~~~~~il~~Ls~~~~~R~~ivqqGai~~Ll~l~~~gt~~~~~~A~~ 82 (164)
|.+|++++.++- .++.++.+ ..+.+..++.+|..++..|..+.. .+++..|+++..+..+..+..|+.
T Consensus 67 r~~a~~aL~~~~-~~~~~~~L-~~~l~~~~~~vr~~a~~aL~~~~~----------~~~~~~L~~~l~d~~~~vr~~a~~ 134 (211)
T 3ltm_A 67 RRAAADALGQIG-DERAVEPL-IKALKDEDGWVRQSAAVALGQIGD----------ERAVEPLIKALKDEDWFVRIAAAF 134 (211)
T ss_dssp HHHHHHHHHHHC-CGGGHHHH-HHHTTCSSHHHHHHHHHHHHHHCC----------GGGHHHHHHHTTCSSHHHHHHHHH
T ss_pred HHHHHHHHHhhC-CHHHHHHH-HHHHcCCCHHHHHHHHHHHHHhCc----------HHHHHHHHHHHhCCCHHHHHHHHH
Confidence 455555555543 33455554 444555555666665555555432 234555555554444555555666
Q ss_pred HHHHHhCcCCCCcccCCCCcccchHHHHhccCCCcchHHHHHHHHHHHccc
Q psy4705 83 GLARLGITLNPEVAFPGERSLEVVRPLLSLLHPEATALETFEGLMALCNLA 133 (164)
Q Consensus 83 ALakLlIs~nP~l~f~~~~~~~av~pL~~LL~~~~~~l~~fEaLlALTNLA 133 (164)
+|+++. + .+++++|..+++ +.+..-+.+++.+|.++.
T Consensus 135 aL~~~~---~----------~~~~~~L~~~l~-d~~~~vr~~a~~aL~~~~ 171 (211)
T 3ltm_A 135 ALGEIG---D----------ERAVEPLIKALK-DEDGWVRQSAADALGEIG 171 (211)
T ss_dssp HHHHHC---C----------GGGHHHHHHHTT-CSSHHHHHHHHHHHHHHC
T ss_pred HHHHcC---C----------HHHHHHHHHHHc-CCCHHHHHHHHHHHHHhC
Confidence 666551 1 135566666665 444445566666666664
No 45
>1oyz_A Hypothetical protein YIBA; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.10A {Escherichia coli} SCOP: a.118.1.16
Probab=97.25 E-value=0.0075 Score=47.55 Aligned_cols=46 Identities=13% Similarity=0.074 Sum_probs=35.8
Q ss_pred hhHHHHHHHHHHhcChhHHHHHHHhhcccCCHHHHHHHHHHHHHhccc
Q psy4705 2 LRRAATQTMTNMIVSEDVIKIYEANKDKVESDNTRELLARILNALASQ 49 (164)
Q Consensus 2 ~~~aa~~~l~nli~~~~vi~~l~v~l~k~~S~~~k~~~~~il~~Ls~~ 49 (164)
.|++|+.++.++- .+++++.+ ..+.+..++.+|..++..|..+..+
T Consensus 39 vr~~A~~~L~~~~-~~~~~~~L-~~~l~d~~~~vR~~A~~aL~~l~~~ 84 (280)
T 1oyz_A 39 KRISSARVLQLRG-GQDAVRLA-IEFCSDKNYIRRDIGAFILGQIKIC 84 (280)
T ss_dssp HHHHHHHHHHHHC-CHHHHHHH-HHHHTCSSHHHHHHHHHHHHHSCCC
T ss_pred HHHHHHHHHHccC-CchHHHHH-HHHHcCCCHHHHHHHHHHHHHhccc
Confidence 4778888888765 67788887 6777778888888888888877644
No 46
>1te4_A Conserved protein MTH187; methanobacterium thermoautotrophicum, structural proteomics, heat-like repeat; NMR {Methanothermobacterthermautotrophicus} SCOP: a.118.1.16
Probab=97.11 E-value=0.00041 Score=49.69 Aligned_cols=103 Identities=19% Similarity=0.181 Sum_probs=74.0
Q ss_pred hHHHHHHHHHHhcChhHHHHHHHhhcccCCHHHHHHHHHHHHHhccchhhHHHHHhcChHHHHHHHhhccchhhhhHHHH
Q psy4705 3 RRAATQTMTNMIVSEDVIKIYEANKDKVESDNTRELLARILNALASQQELRGLMVQQGASKALIHLAHNGTVKGKRQAAQ 82 (164)
Q Consensus 3 ~~aa~~~l~nli~~~~vi~~l~v~l~k~~S~~~k~~~~~il~~Ls~~~~~R~~ivqqGai~~Ll~l~~~gt~~~~~~A~~ 82 (164)
|++|+..+.++- .+. ++.+ ..+.+..++.+|..+++.|..+.. ..++..|+.+..+..+..+..|+.
T Consensus 29 R~~A~~~L~~~~-~~~-~~~L-~~~L~d~~~~vR~~A~~aL~~~~~----------~~a~~~L~~~L~d~~~~VR~~A~~ 95 (131)
T 1te4_A 29 RRDVSTALSRMG-DEA-FEPL-LESLSNEDWRIRGAAAWIIGNFQD----------ERAVEPLIKLLEDDSGFVRSGAAR 95 (131)
T ss_dssp SSSCCSSTTSCS-STT-HHHH-HHGGGCSCHHHHHHHHHHHGGGCS----------HHHHHHHHHHHHHCCTHHHHHHHH
T ss_pred HHHHHHHHHHhC-chH-HHHH-HHHHcCCCHHHHHHHHHHHHhcCC----------HHHHHHHHHHHcCCCHHHHHHHHH
Confidence 444444444432 223 4666 577778889999999998887763 235788888777777788889999
Q ss_pred HHHHHhCcCCCCcccCCCCcccchHHHHhccCCCcchHHHHHHHHHHHcc
Q psy4705 83 GLARLGITLNPEVAFPGERSLEVVRPLLSLLHPEATALETFEGLMALCNL 132 (164)
Q Consensus 83 ALakLlIs~nP~l~f~~~~~~~av~pL~~LL~~~~~~l~~fEaLlALTNL 132 (164)
+|+++. + .+++++|..+++ +.+..-+..|..||.++
T Consensus 96 aL~~~~---~----------~~a~~~L~~~l~-d~~~~vr~~A~~aL~~i 131 (131)
T 1te4_A 96 SLEQIG---G----------ERVRAAMEKLAE-TGTGFARKVAVNYLETH 131 (131)
T ss_dssp HHHHHC---S----------HHHHHHHHHHTT-SCCTHHHHHHHHHGGGC
T ss_pred HHHHhC---c----------HHHHHHHHHHHh-CCCHHHHHHHHHHHHhC
Confidence 999984 1 347889999997 56666677888888764
No 47
>3grl_A General vesicular transport factor P115; vesicle transport, membrane trafficking, membrane tethering, fusion, snare, RAB GTPase, armadillo repeats; 2.00A {Bos taurus} PDB: 3gq2_A 2w3c_A
Probab=97.07 E-value=0.0017 Score=59.83 Aligned_cols=142 Identities=16% Similarity=0.153 Sum_probs=96.3
Q ss_pred hHHHHHHHHHH------hcChhHHHHHHHhhcccCC--HHHHHHHHHHHHH-hccchhhH------------------HH
Q psy4705 3 RRAATQTMTNM------IVSEDVIKIYEANKDKVES--DNTRELLARILNA-LASQQELR------------------GL 55 (164)
Q Consensus 3 ~~aa~~~l~nl------i~~~~vi~~l~v~l~k~~S--~~~k~~~~~il~~-Ls~~~~~R------------------~~ 55 (164)
||+|...+..+ .+-.+.++.+ .+..+.+. ...-..+-.+|++ ++.+++.. .-
T Consensus 39 RR~Av~~Lk~~sk~y~~~Vg~~~l~~l-i~~L~~d~~D~e~v~~~LetL~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~f 117 (651)
T 3grl_A 39 RRNAVRALKSLSKKYRLEVGIQAMEHL-IHVLQTDRSDSEIIGYALDTLYNIISNDEEEEVEENSTRQSEDLGSQFTEIF 117 (651)
T ss_dssp HHHHHHHHHHTTTTTTTHHHHHTHHHH-HHHHHSCTTCHHHHHHHHHHHHHHHCCC--------------CHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhHHHhhhhhHHHH-HHHHhcccccHHHHHHHHHHHHHHhCCCCcccccccccccchHHHHHHHHHH
Confidence 89999999987 3445667776 56555442 3333334456655 44443211 22
Q ss_pred HHhcChHHHHHHHhhccchhhhhHHHHHHHHHhCcCCCCcc--cCCCCcccchHHHHhccCCCcchHHHHHHHHHHHccc
Q psy4705 56 MVQQGASKALIHLAHNGTVKGKRQAAQGLARLGITLNPEVA--FPGERSLEVVRPLLSLLHPEATALETFEGLMALCNLA 133 (164)
Q Consensus 56 ivqqGai~~Ll~l~~~gt~~~~~~A~~ALakLlIs~nP~l~--f~~~~~~~av~pL~~LL~~~~~~l~~fEaLlALTNLA 133 (164)
+.+++++..|+++..+.....|..+.|.|..|+.+...... +- ..-.+|+.|+.+|+ |..+--+-|+++.|++|+
T Consensus 118 ~~~~~~i~~Ll~lL~~~df~vR~~alqlL~~L~~~r~~~~Q~~Il--~~p~gi~~Lv~lL~-d~rE~iRneallLL~~Lt 194 (651)
T 3grl_A 118 IKQQENVTLLLSLLEEFDFHVRWPGVKLLTSLLKQLGPQVQQIIL--VSPMGVSRLMDLLA-DSREVIRNDGVLLLQALT 194 (651)
T ss_dssp HHSTHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHSHHHHHHHHH--HSTTHHHHHHGGGG-CSSHHHHHHHHHHHHHHH
T ss_pred HcCCccHHHHHHHhcCccHHHHHHHHHHHHHHHhcCcHHHHHHHH--hCcccHHHHHHHHh-CchHHHHHHHHHHHHHHh
Confidence 34678999999988877778889999999999766433221 10 12358999999998 555666779999999999
Q ss_pred CCChHHHHHHHhccc
Q psy4705 134 AIGEKQRQRKKLNFR 148 (164)
Q Consensus 134 s~~~~~r~~Iv~~~~ 148 (164)
..+.++++.++-|+.
T Consensus 195 ~~n~~iQklVAFEna 209 (651)
T 3grl_A 195 RSNGAIQKIVAFENA 209 (651)
T ss_dssp TTCHHHHHHHHHTTH
T ss_pred cCCHHHHHHHHHhcc
Confidence 988887777777654
No 48
>4gmo_A Putative uncharacterized protein; ARM, heat, solenoid, nuclear transport, chaperone, RPL5, RPL KAP104, nucleus; 2.10A {Chaetomium thermophilum var} PDB: 4gmn_A
Probab=96.19 E-value=0.011 Score=53.89 Aligned_cols=145 Identities=16% Similarity=0.084 Sum_probs=93.6
Q ss_pred hhHHHHHHHHHHhcC---------hhHHHHHHHhhcccCCHHHHHHHHHHHHHhccc--hhhHHHHHhcChHHHHHHHhh
Q psy4705 2 LRRAATQTMTNMIVS---------EDVIKIYEANKDKVESDNTRELLARILNALASQ--QELRGLMVQQGASKALIHLAH 70 (164)
Q Consensus 2 ~~~aa~~~l~nli~~---------~~vi~~l~v~l~k~~S~~~k~~~~~il~~Ls~~--~~~R~~ivqqGai~~Ll~l~~ 70 (164)
.|..|..+++|++.+ ++++.++...+....+..+|+.++-+|-||+.+ .+.+..++.+|.+++|+.+.+
T Consensus 50 ~r~~A~~al~~l~~~~~~~~l~~~~~~v~~ll~~lL~D~~~~Vr~~A~gaLrnL~~~~g~d~~~~l~~~~il~~L~~~l~ 129 (684)
T 4gmo_A 50 SRTTAAGAIANIVQDAKCRKLLLREQVVHIVLTETLTDNNIDSRAAGWEILKVLAQEEEADFCVHLYRLDVLTAIEHAAK 129 (684)
T ss_dssp HHHHHHHHHHHHTTSHHHHHHHHHTTHHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHSCHHHHHHHHHTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCcHHHHHHHHcCCHHHHHHHHcCCCCHHHHHHHHHHHHHHHhhcCchHHHHHHHcChHHHHHHHHH
Confidence 478899999999655 445554434555667899999999999999976 588999999999999998654
Q ss_pred ccc--------------hhhh-------hHHHHHHHHHhCcCCCCcccCCCCcccchHHHHhcc-CCCcch-HHHHHHHH
Q psy4705 71 NGT--------------VKGK-------RQAAQGLARLGITLNPEVAFPGERSLEVVRPLLSLL-HPEATA-LETFEGLM 127 (164)
Q Consensus 71 ~gt--------------~~~~-------~~A~~ALakLlIs~nP~l~f~~~~~~~av~pL~~LL-~~~~~~-l~~fEaLl 127 (164)
+.. ...+ ..+...|..|+-+.+-.+ ......+.+++|+.+| +.+... .-.-.|+-
T Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lL~~L~e~s~~~~--~~v~~~~~l~~l~~~L~~~~~~~~~v~~~a~~ 207 (684)
T 4gmo_A 130 AVLETLTTSEPPFSKLLKAQQRLVWDITGSLLVLIGLLALARDEIH--EAVATKQTILRLLFRLISADIAPQDIYEEAIS 207 (684)
T ss_dssp HHHHHHHCBTTBGGGSCHHHHHHHHHHHHHHHHHHHHHHHHCHHHH--HHHHTCHHHHHHHHHHHHHCCSCHHHHHHHHH
T ss_pred hhHHHHhhhccccccccHHHHHHHHHHHHHHHHHHHHHHhCCHHHH--HHHHhcccHHHHHHHHHhcCCCcHHHHHHHHH
Confidence 211 0001 112344444443333221 1111245789998866 333222 23445778
Q ss_pred HHHcccCCChHHHHHHHhccc
Q psy4705 128 ALCNLAAIGEKQRQRKKLNFR 148 (164)
Q Consensus 128 ALTNLAs~~~~~r~~Iv~~~~ 148 (164)
.|.+|++.+++.-+.|...+.
T Consensus 208 ~L~~ls~dn~~~~~~i~~~~~ 228 (684)
T 4gmo_A 208 CLTTLSEDNLKVGQAITDDQE 228 (684)
T ss_dssp HHHHHHTTCHHHHHHHHTCCS
T ss_pred HHHHHhccCHHHHHHHHhcch
Confidence 889998877777777776654
No 49
>4fdd_A Transportin-1; heat repeats, karyopherin, nuclear import, protein transport importin, transportin, transport protein; 2.30A {Homo sapiens} PDB: 2ot8_A 2h4m_A 2z5k_A 2z5j_A 2qmr_A 2z5m_A 2z5n_A 2z5o_A 1qbk_B*
Probab=96.14 E-value=0.014 Score=53.35 Aligned_cols=129 Identities=11% Similarity=0.017 Sum_probs=87.5
Q ss_pred hhHHHHHHHHHHhcC--h----hHHHHHHHhhcccCCHHHHHHHHHHHHHhccchhhHHHHHhcChHHHHHHHhhccchh
Q psy4705 2 LRRAATQTMTNMIVS--E----DVIKIYEANKDKVESDNTRELLARILNALASQQELRGLMVQQGASKALIHLAHNGTVK 75 (164)
Q Consensus 2 ~~~aa~~~l~nli~~--~----~vi~~l~v~l~k~~S~~~k~~~~~il~~Ls~~~~~R~~ivqqGai~~Ll~l~~~gt~~ 75 (164)
+|++|++++-.+... + .+++.+ ....++.+...|+.++..+.++++.......-.-.+.++.|+....+..+.
T Consensus 337 vr~~a~~~L~~la~~~~~~~~~~l~~~l-~~~l~~~~~~~R~aa~~alg~i~~~~~~~~~~~l~~~l~~l~~~l~d~~~~ 415 (852)
T 4fdd_A 337 LRKCSAAALDVLANVYRDELLPHILPLL-KELLFHHEWVVKESGILVLGAIAEGCMQGMIPYLPELIPHLIQCLSDKKAL 415 (852)
T ss_dssp HHHHHHHHHHHHHHHHGGGGHHHHHHHH-HHHHTCSSHHHHHHHHHHHHHTTTTTHHHHGGGHHHHHHHHHHHTTCSSHH
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHHHHH-HHHhcCCCHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHcCCCCHH
Confidence 588999998887432 2 344444 455667789999999999999998654322112245677777777777778
Q ss_pred hhhHHHHHHHHHhCcCCCCcccCCCCcccchHHHHhccCCCcchHHHHHHHHHHHcccC
Q psy4705 76 GKRQAAQGLARLGITLNPEVAFPGERSLEVVRPLLSLLHPEATALETFEGLMALCNLAA 134 (164)
Q Consensus 76 ~~~~A~~ALakLlIs~nP~l~f~~~~~~~av~pL~~LL~~~~~~l~~fEaLlALTNLAs 134 (164)
.+..|+.+|.++.-...+.. +. ....+.+++|+..+. +.+..-+..|..||.|++.
T Consensus 416 Vr~~a~~~l~~l~~~~~~~~-~~-~~~~~ll~~L~~~L~-d~~~~vr~~a~~aL~~l~~ 471 (852)
T 4fdd_A 416 VRSITCWTLSRYAHWVVSQP-PD-TYLKPLMTELLKRIL-DSNKRVQEAACSAFATLEE 471 (852)
T ss_dssp HHHHHHHHHHHTHHHHHHSC-TT-TTHHHHHHHHHHHHT-CSSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccch-HH-HHHHHHHHHHHHHHh-CCCHHHHHHHHHHHHHHHH
Confidence 88889999999865432221 11 112458889999887 4444556678889988873
No 50
>2vgl_B AP-2 complex subunit beta-1; cytoplasmic vesicle, alternative splicing, endocytosis, lipid-binding, golgi apparatus, adaptor, membrane, transport; HET: IHP; 2.59A {Homo sapiens} SCOP: i.23.1.1 PDB: 2jkt_B 2jkr_B* 2xa7_B 1w63_B
Probab=95.14 E-value=0.088 Score=46.62 Aligned_cols=89 Identities=20% Similarity=0.179 Sum_probs=61.6
Q ss_pred hhHHHHHHHHHHhcC---hhHHHHHHHhhcccCCHHHHHHHHHHHHHhccchhhHHHHHhcChHHHHHHHhhccchhhhh
Q psy4705 2 LRRAATQTMTNMIVS---EDVIKIYEANKDKVESDNTRELLARILNALASQQELRGLMVQQGASKALIHLAHNGTVKGKR 78 (164)
Q Consensus 2 ~~~aa~~~l~nli~~---~~vi~~l~v~l~k~~S~~~k~~~~~il~~Ls~~~~~R~~ivqqGai~~Ll~l~~~gt~~~~~ 78 (164)
+|..|..+|++.... +.+++.+ ..+.+..++.+|..++..++.+...... .+-..|.+..|.++..+..+..+.
T Consensus 102 ir~~AL~~L~~i~~~~~~~~l~~~l-~~~L~d~~~~VRk~A~~al~~i~~~~p~--~~~~~~~~~~l~~lL~d~d~~V~~ 178 (591)
T 2vgl_B 102 IRALAVRTMGCIRVDKITEYLCEPL-RKCLKDEDPYVRKTAAVCVAKLHDINAQ--MVEDQGFLDSLRDLIADSNPMVVA 178 (591)
T ss_dssp HHHHHHHHHHTCCSGGGHHHHHHHH-HHHSSCSCHHHHHHHHHHHHHHHHSSCC--CHHHHHHHHHHHHTTSCSCHHHHH
T ss_pred HHHHHHHHHHcCChHHHHHHHHHHH-HHHcCCCChHHHHHHHHHHHHHHhhChh--hcccccHHHHHHHHhCCCChhHHH
Confidence 577888888887422 3344445 4566788999999999999998874221 122246677777777666667788
Q ss_pred HHHHHHHHHhCcCCCC
Q psy4705 79 QAAQGLARLGITLNPE 94 (164)
Q Consensus 79 ~A~~ALakLlIs~nP~ 94 (164)
.|+.+|..+.-. +|.
T Consensus 179 ~A~~aL~~i~~~-~~~ 193 (591)
T 2vgl_B 179 NAVAALSEISES-HPN 193 (591)
T ss_dssp HHHHHHHHHTTS-CCS
T ss_pred HHHHHHHHHHhh-CCC
Confidence 889999998544 443
No 51
>2qk2_A LP04448P; mini spindles, MSPS, XMAP215, DIS1, STU2, heat repeat, micro plus END, +TIP, protein binding; 2.10A {Drosophila melanogaster}
Probab=95.02 E-value=0.2 Score=38.65 Aligned_cols=123 Identities=16% Similarity=0.098 Sum_probs=77.3
Q ss_pred hhHHHHHHHHHHhcC---------hhHHHHHHHhhcccCCHHHHHHHHHHHHHhccchhhHHHHHhcChHHHHHHHhhcc
Q psy4705 2 LRRAATQTMTNMIVS---------EDVIKIYEANKDKVESDNTRELLARILNALASQQELRGLMVQQGASKALIHLAHNG 72 (164)
Q Consensus 2 ~~~aa~~~l~nli~~---------~~vi~~l~v~l~k~~S~~~k~~~~~il~~Ls~~~~~R~~ivqqGai~~Ll~l~~~g 72 (164)
.|.+|..++..++.. +.+++.+ ....+..++.+|+.+...+..+....... --+..++......
T Consensus 73 V~~~a~~~l~~la~~l~~~~~~~~~~ilp~l-l~~l~d~~~~vr~~a~~aL~~~~~~~~~~------~ll~~l~~~l~~~ 145 (242)
T 2qk2_A 73 LVAMAGKCLALLAKGLAKRFSNYASACVPSL-LEKFKEKKPNVVTALREAIDAIYASTSLE------AQQESIVESLSNK 145 (242)
T ss_dssp HHHHHHHHHHHHHHHHGGGGHHHHHHHHHHH-HHGGGCCCHHHHHHHHHHHHHHHTTSCHH------HHHHHHHHHTTCS
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHHHHHH-HHHHcCCCHHHHHHHHHHHHHHHHcCCHH------HHHHHHHHHHcCC
Confidence 366777777777532 3355555 45566678899999999998887753211 1122333444455
Q ss_pred chhhhhHHHHHHHHHhCcCCCCcccCCCCcccchHHHHhccCCCcchHHHHHHHHHHHccc
Q psy4705 73 TVKGKRQAAQGLARLGITLNPEVAFPGERSLEVVRPLLSLLHPEATALETFEGLMALCNLA 133 (164)
Q Consensus 73 t~~~~~~A~~ALakLlIs~nP~l~f~~~~~~~av~pL~~LL~~~~~~l~~fEaLlALTNLA 133 (164)
.+..|..+...|..++-+.+|...|..+ ....+|.|+.+|+ |....-+-.|.-++..++
T Consensus 146 ~~~vr~~~l~~l~~~l~~~~~~~~~~~~-l~~l~p~l~~~l~-D~~~~VR~~A~~~l~~l~ 204 (242)
T 2qk2_A 146 NPSVKSETALFIARALTRTQPTALNKKL-LKLLTTSLVKTLN-EPDPTVRDSSAEALGTLI 204 (242)
T ss_dssp CHHHHHHHHHHHHHHHTTCCGGGCCHHH-HHHHHHHHHHHHT-SSCHHHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHHHHcCCCCccHHH-HHHHHHHHHHHhc-CCChHHHHHHHHHHHHHH
Confidence 6788899999999998888777444322 2358889999997 554333333444444443
No 52
>1te4_A Conserved protein MTH187; methanobacterium thermoautotrophicum, structural proteomics, heat-like repeat; NMR {Methanothermobacterthermautotrophicus} SCOP: a.118.1.16
Probab=94.97 E-value=0.039 Score=39.06 Aligned_cols=74 Identities=23% Similarity=0.204 Sum_probs=56.3
Q ss_pred hhHHHHHHHHHHhcChhHHHHHHHhhcccCCHHHHHHHHHHHHHhccchhhHHHHHhcChHHHHHHHhhccchhhhhHHH
Q psy4705 2 LRRAATQTMTNMIVSEDVIKIYEANKDKVESDNTRELLARILNALASQQELRGLMVQQGASKALIHLAHNGTVKGKRQAA 81 (164)
Q Consensus 2 ~~~aa~~~l~nli~~~~vi~~l~v~l~k~~S~~~k~~~~~il~~Ls~~~~~R~~ivqqGai~~Ll~l~~~gt~~~~~~A~ 81 (164)
+|.+|+.++.++- ++++++.+ ..+.+..++.+|..++..|..+.. ..++..|+.+..+..+..+..|.
T Consensus 58 vR~~A~~aL~~~~-~~~a~~~L-~~~L~d~~~~VR~~A~~aL~~~~~----------~~a~~~L~~~l~d~~~~vr~~A~ 125 (131)
T 1te4_A 58 IRGAAAWIIGNFQ-DERAVEPL-IKLLEDDSGFVRSGAARSLEQIGG----------ERVRAAMEKLAETGTGFARKVAV 125 (131)
T ss_dssp HHHHHHHHHGGGC-SHHHHHHH-HHHHHHCCTHHHHHHHHHHHHHCS----------HHHHHHHHHHTTSCCTHHHHHHH
T ss_pred HHHHHHHHHHhcC-CHHHHHHH-HHHHcCCCHHHHHHHHHHHHHhCc----------HHHHHHHHHHHhCCCHHHHHHHH
Confidence 5778888887754 56788887 566678889999999999988762 34677888877666677788888
Q ss_pred HHHHHH
Q psy4705 82 QGLARL 87 (164)
Q Consensus 82 ~ALakL 87 (164)
++|.+|
T Consensus 126 ~aL~~i 131 (131)
T 1te4_A 126 NYLETH 131 (131)
T ss_dssp HHGGGC
T ss_pred HHHHhC
Confidence 888764
No 53
>4fdd_A Transportin-1; heat repeats, karyopherin, nuclear import, protein transport importin, transportin, transport protein; 2.30A {Homo sapiens} PDB: 2ot8_A 2h4m_A 2z5k_A 2z5j_A 2qmr_A 2z5m_A 2z5n_A 2z5o_A 1qbk_B*
Probab=94.75 E-value=0.23 Score=45.27 Aligned_cols=127 Identities=12% Similarity=0.139 Sum_probs=81.3
Q ss_pred hhHHHHHHHHHHhcC---------hhHHHHHHHhhcccCCHHHHHHHHHHHHHhccchhhHHHHHhc---ChHHHHHHHh
Q psy4705 2 LRRAATQTMTNMIVS---------EDVIKIYEANKDKVESDNTRELLARILNALASQQELRGLMVQQ---GASKALIHLA 69 (164)
Q Consensus 2 ~~~aa~~~l~nli~~---------~~vi~~l~v~l~k~~S~~~k~~~~~il~~Ls~~~~~R~~ivqq---Gai~~Ll~l~ 69 (164)
.|++|.+++.+++.. +++++.+ ..+.+...+.+|..+...+..+++.+..+. .++. .-++.|++..
T Consensus 231 vr~~a~~~L~~l~~~~~~~~~~~l~~l~~~l-~~~~~~~~~~vr~~a~e~l~~l~~~~~~~~-~~~~~~~~l~p~ll~~l 308 (852)
T 4fdd_A 231 VRKNVCRALVMLLEVRMDRLLPHMHNIVEYM-LQRTQDQDENVALEACEFWLTLAEQPICKD-VLVRHLPKLIPVLVNGM 308 (852)
T ss_dssp HHHHHHHHHHHHHHHCHHHHGGGHHHHHHHH-HHHHTCSSHHHHHHHHHHHHHHTTSTTHHH-HHTTTHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHhCHHHHHHHHHHHHHHH-HHHccCCcHHHHHHHHHHHHHHhcchhHHH-HHHHHHHHHHHHHHHHc
Confidence 588999999988542 3455555 455667789999999999999998764443 2222 1223333322
Q ss_pred -----------hc-----------cchhhhhHHHHHHHHHhCcCCCCcccCCCCcccchHHHHhccCCCcchHHHHHHHH
Q psy4705 70 -----------HN-----------GTVKGKRQAAQGLARLGITLNPEVAFPGERSLEVVRPLLSLLHPEATALETFEGLM 127 (164)
Q Consensus 70 -----------~~-----------gt~~~~~~A~~ALakLlIs~nP~l~f~~~~~~~av~pL~~LL~~~~~~l~~fEaLl 127 (164)
.+ .....+..|+.+|.++.-.. |..++ ...++.+..++. +.+-..++.|++
T Consensus 309 ~~~e~d~~~~~~d~~ed~~~dd~~~~~~vr~~a~~~L~~la~~~-~~~~~-----~~l~~~l~~~l~-~~~~~~R~aa~~ 381 (852)
T 4fdd_A 309 KYSDIDIILLKGDVEGGSGGDDTISDWNLRKCSAAALDVLANVY-RDELL-----PHILPLLKELLF-HHEWVVKESGIL 381 (852)
T ss_dssp SCCHHHHHHHHC------------CCCCHHHHHHHHHHHHHHHH-GGGGH-----HHHHHHHHHHHT-CSSHHHHHHHHH
T ss_pred CCcHhHHHHhcCCcccccccccccccchHHHHHHHHHHHHHHhc-cHHHH-----HHHHHHHHHHhc-CCCHHHHHHHHH
Confidence 11 11123667888888886433 22222 235666677777 566788999999
Q ss_pred HHHcccCCCh
Q psy4705 128 ALCNLAAIGE 137 (164)
Q Consensus 128 ALTNLAs~~~ 137 (164)
+|++++....
T Consensus 382 alg~i~~~~~ 391 (852)
T 4fdd_A 382 VLGAIAEGCM 391 (852)
T ss_dssp HHHHTTTTTH
T ss_pred HHHHHHhcch
Confidence 9999987543
No 54
>1b3u_A Protein (protein phosphatase PP2A); scaffold protein, phosphorylation, heat repeat; 2.30A {Homo sapiens} SCOP: a.118.1.2 PDB: 2ie4_A* 2ie3_A* 2npp_A* 3k7v_A* 3k7w_A* 3fga_A* 2pf4_A 2iae_A 2nym_A* 2nyl_A* 3dw8_A* 2pkg_A 3c5w_A
Probab=94.24 E-value=0.16 Score=43.17 Aligned_cols=122 Identities=13% Similarity=0.134 Sum_probs=61.1
Q ss_pred hhHHHHHHHHHHhcC-------hhHHHHHHHhhcccCCHHHHHHHHHHHHHhccchhhHHHHHhcChHHHHHHHhhccch
Q psy4705 2 LRRAATQTMTNMIVS-------EDVIKIYEANKDKVESDNTRELLARILNALASQQELRGLMVQQGASKALIHLAHNGTV 74 (164)
Q Consensus 2 ~~~aa~~~l~nli~~-------~~vi~~l~v~l~k~~S~~~k~~~~~il~~Ls~~~~~R~~ivqqGai~~Ll~l~~~gt~ 74 (164)
.|++|.+++.++... ..+++.+ ..+..+++...|+.++.++..++..-.. -.+..-++.+..+..+..+
T Consensus 103 vR~~a~~~L~~l~~~~~~~~~~~~l~~~l-~~l~~~~~~~~R~~a~~~l~~~~~~~~~---~~~~~l~~~l~~l~~d~~~ 178 (588)
T 1b3u_A 103 VRDKAVESLRAISHEHSPSDLEAHFVPLV-KRLAGGDWFTSRTSACGLFSVCYPRVSS---AVKAELRQYFRNLCSDDTP 178 (588)
T ss_dssp HHHHHHHHHHHHHTTSCHHHHHHTHHHHH-HHHHTCSSHHHHHHHGGGHHHHTTTSCH---HHHHHHHHHHHHHHTCSCH
T ss_pred HHHHHHHHHHHHHHHCCHHHHHHHHHHHH-HHHhcCCCcHHHHHHHHHHHHHHHhcCH---HHHHHHHHHHHHHhCCCCH
Confidence 466777777776543 1123333 3444555666666666666655543211 0112223344445555556
Q ss_pred hhhhHHHHHHHHHhCcCCCCcccCCCCcccchHHHHhccCCCcchHHHHHHHHHHHccc
Q psy4705 75 KGKRQAAQGLARLGITLNPEVAFPGERSLEVVRPLLSLLHPEATALETFEGLMALCNLA 133 (164)
Q Consensus 75 ~~~~~A~~ALakLlIs~nP~l~f~~~~~~~av~pL~~LL~~~~~~l~~fEaLlALTNLA 133 (164)
..+..|+++|.++.-...+... ..+.+|.|..++. |.+..-+..|+.+|..++
T Consensus 179 ~VR~~a~~~l~~l~~~~~~~~~-----~~~l~~~l~~~~~-d~~~~vr~~a~~~l~~l~ 231 (588)
T 1b3u_A 179 MVRRAAASKLGEFAKVLELDNV-----KSEIIPMFSNLAS-DEQDSVRLLAVEACVNIA 231 (588)
T ss_dssp HHHHHHHHHHHHHHHTSCHHHH-----HHTHHHHHHHHHT-CSCHHHHTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcHHhH-----HHHHHHHHHHHhc-CCcHHHHHHHHHHHHHHH
Confidence 6777788888887543332211 1235556666665 333333334444444443
No 55
>3grl_A General vesicular transport factor P115; vesicle transport, membrane trafficking, membrane tethering, fusion, snare, RAB GTPase, armadillo repeats; 2.00A {Bos taurus} PDB: 3gq2_A 2w3c_A
Probab=94.14 E-value=0.28 Score=45.11 Aligned_cols=130 Identities=13% Similarity=0.087 Sum_probs=92.6
Q ss_pred cChhHHHHHHHhhcccCCHHHHHHHHHHHHHhccchh--hHHHHHh-cChHHHHHHHhhccchhhhhHHHHHHHHHhCcC
Q psy4705 15 VSEDVIKIYEANKDKVESDNTRELLARILNALASQQE--LRGLMVQ-QGASKALIHLAHNGTVKGKRQAAQGLARLGITL 91 (164)
Q Consensus 15 ~~~~vi~~l~v~l~k~~S~~~k~~~~~il~~Ls~~~~--~R~~ivq-qGai~~Ll~l~~~gt~~~~~~A~~ALakLlIs~ 91 (164)
..++.++.+ +++.++.+-.+|-.+.++|-.|+.... ....|.. .||+..|+.+..+..+..|..|.-.|..|. ..
T Consensus 119 ~~~~~i~~L-l~lL~~~df~vR~~alqlL~~L~~~r~~~~Q~~Il~~p~gi~~Lv~lL~d~rE~iRneallLL~~Lt-~~ 196 (651)
T 3grl_A 119 KQQENVTLL-LSLLEEFDFHVRWPGVKLLTSLLKQLGPQVQQIILVSPMGVSRLMDLLADSREVIRNDGVLLLQALT-RS 196 (651)
T ss_dssp HSTHHHHHH-HHHTTCCCHHHHHHHHHHHHHHHHHSHHHHHHHHHHSTTHHHHHHGGGGCSSHHHHHHHHHHHHHHH-TT
T ss_pred cCCccHHHH-HHHhcCccHHHHHHHHHHHHHHHhcCcHHHHHHHHhCcccHHHHHHHHhCchHHHHHHHHHHHHHHh-cC
Confidence 345667776 788899999999999999999987743 5666774 499999999988877888877777787774 34
Q ss_pred CCCcccCCCCcc-cchHHHHhccCCCcc---hHHHHHHHHHHHcccCCChHHHHHHHhccc
Q psy4705 92 NPEVAFPGERSL-EVVRPLLSLLHPEAT---ALETFEGLMALCNLAAIGEKQRQRKKLNFR 148 (164)
Q Consensus 92 nP~l~f~~~~~~-~av~pL~~LL~~~~~---~l~~fEaLlALTNLAs~~~~~r~~Iv~~~~ 148 (164)
|+.++ +-... +++++|++++..++. ..=.-..|..|.||...+....+-+.+.+.
T Consensus 197 n~~iQ--klVAFEnaFe~Lf~Ii~~Eg~~~Ggivv~DCL~ll~nLLr~N~sNQ~~FrEt~~ 255 (651)
T 3grl_A 197 NGAIQ--KIVAFENAFERLLDIITEEGNSDGGIVVEDCLILLQNLLKNNNSNQNFFKEGSY 255 (651)
T ss_dssp CHHHH--HHHHHTTHHHHHHHHHHHHTGGGSHHHHHHHHHHHHHHHTTCHHHHHHHHHTTC
T ss_pred CHHHH--HHHHHhccHHHHHHHHHhcCCCccchhHHHHHHHHHHHHhcCHHHHHHHHHcCC
Confidence 55432 01122 589999999984332 122344677899999987766555555554
No 56
>1b3u_A Protein (protein phosphatase PP2A); scaffold protein, phosphorylation, heat repeat; 2.30A {Homo sapiens} SCOP: a.118.1.2 PDB: 2ie4_A* 2ie3_A* 2npp_A* 3k7v_A* 3k7w_A* 3fga_A* 2pf4_A 2iae_A 2nym_A* 2nyl_A* 3dw8_A* 2pkg_A 3c5w_A
Probab=94.07 E-value=0.39 Score=40.74 Aligned_cols=45 Identities=18% Similarity=0.059 Sum_probs=21.9
Q ss_pred hHHHHHHHHHHh-------cChhHHHHHHHhhcccCCHHHHHHHHHHHHHhcc
Q psy4705 3 RRAATQTMTNMI-------VSEDVIKIYEANKDKVESDNTRELLARILNALAS 48 (164)
Q Consensus 3 ~~aa~~~l~nli-------~~~~vi~~l~v~l~k~~S~~~k~~~~~il~~Ls~ 48 (164)
|.++.+++..+. ..+.+++.+ ..+.+..+..+|+.++..+..++.
T Consensus 419 r~~~~~~l~~l~~~~~~~~~~~~l~~~l-~~~l~d~~~~Vr~~a~~~l~~l~~ 470 (588)
T 1b3u_A 419 RLAIIEYMPLLAGQLGVEFFDEKLNSLC-MAWLVDHVYAIREAATSNLKKLVE 470 (588)
T ss_dssp HHHHHHHHHHHHHHHCGGGCCHHHHHHH-HHGGGCSSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCHHHHHHHHHHHH-HHHhcCCcHHHHHHHHHHHHHHHH
Confidence 445555555442 234555554 344444555555555555554443
No 57
>2qk2_A LP04448P; mini spindles, MSPS, XMAP215, DIS1, STU2, heat repeat, micro plus END, +TIP, protein binding; 2.10A {Drosophila melanogaster}
Probab=94.07 E-value=0.6 Score=35.91 Aligned_cols=119 Identities=8% Similarity=0.041 Sum_probs=74.1
Q ss_pred hhHHHHHHHHHHhcC---------hhHHHHHHHhhc-ccCCHHHHHHHHHHHHHhccchhhHHHHHhcChHHHHHHHhhc
Q psy4705 2 LRRAATQTMTNMIVS---------EDVIKIYEANKD-KVESDNTRELLARILNALASQQELRGLMVQQGASKALIHLAHN 71 (164)
Q Consensus 2 ~~~aa~~~l~nli~~---------~~vi~~l~v~l~-k~~S~~~k~~~~~il~~Ls~~~~~R~~ivqqGai~~Ll~l~~~ 71 (164)
-|++|+..+..++.. .++++.+ .... +..+..+++.+...+..|+..-...-.-.-.--++.|++..++
T Consensus 31 ~R~~a~~~L~~l~~~~~~~~~~~~~~i~~~L-~~~l~kd~~~~V~~~a~~~l~~la~~l~~~~~~~~~~ilp~ll~~l~d 109 (242)
T 2qk2_A 31 LRKESLEVLEKLLTDHPKLENGEYGALVSAL-KKVITKDSNVVLVAMAGKCLALLAKGLAKRFSNYASACVPSLLEKFKE 109 (242)
T ss_dssp HHHHHHHHHHHHHHHCSSBCCCCCHHHHHHH-HHHHHHCSCHHHHHHHHHHHHHHHHHHGGGGHHHHHHHHHHHHHGGGC
T ss_pred HHHHHHHHHHHHHccCCCCCCCCHHHHHHHH-HHHhccCCCHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHcC
Confidence 388999999888654 2455555 3444 5778899999999999999542111111111234455555556
Q ss_pred cchhhhhHHHHHHHHHhCcCCCCcccCCCCcccchHHHHhccCCCcchHHHHHHHHHHHc
Q psy4705 72 GTVKGKRQAAQGLARLGITLNPEVAFPGERSLEVVRPLLSLLHPEATALETFEGLMALCN 131 (164)
Q Consensus 72 gt~~~~~~A~~ALakLlIs~nP~l~f~~~~~~~av~pL~~LL~~~~~~l~~fEaLlALTN 131 (164)
.....+..|..+|..+.-+.++ ...++.|...|. +.+-.-+.+++..|..
T Consensus 110 ~~~~vr~~a~~aL~~~~~~~~~---------~~ll~~l~~~l~-~~~~~vr~~~l~~l~~ 159 (242)
T 2qk2_A 110 KKPNVVTALREAIDAIYASTSL---------EAQQESIVESLS-NKNPSVKSETALFIAR 159 (242)
T ss_dssp CCHHHHHHHHHHHHHHHTTSCH---------HHHHHHHHHHTT-CSCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHcCCH---------HHHHHHHHHHHc-CCChHHHHHHHHHHHH
Confidence 6667778888999888665432 234566666665 3344445556666666
No 58
>1qgr_A Protein (importin beta subunit); transport receptor, nuclear import, heat motif, NLS-binding; 2.30A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qgk_A 2p8q_A 2q5d_A 3lww_A 1ukl_A 2qna_A
Probab=94.02 E-value=0.42 Score=42.81 Aligned_cols=128 Identities=16% Similarity=0.067 Sum_probs=83.0
Q ss_pred hhHHHHHHHHHHhcC--h----hHHHHHHHhhcccCCHHHHHHHHHHHHHhccch--hhHHHHHhcChHHHHHHHhhccc
Q psy4705 2 LRRAATQTMTNMIVS--E----DVIKIYEANKDKVESDNTRELLARILNALASQQ--ELRGLMVQQGASKALIHLAHNGT 73 (164)
Q Consensus 2 ~~~aa~~~l~nli~~--~----~vi~~l~v~l~k~~S~~~k~~~~~il~~Ls~~~--~~R~~ivqqGai~~Ll~l~~~gt 73 (164)
.|+||.+++..+... + .+++.+ ....+..+...|+.+...+..++... +.-.... ...++.|+.......
T Consensus 344 ~r~~a~~~l~~l~~~~~~~~~~~~l~~l-~~~l~~~~~~~r~~a~~~l~~i~~~~~~~~~~~~~-~~~l~~l~~~l~d~~ 421 (876)
T 1qgr_A 344 PCKAAGVCLMLLATCCEDDIVPHVLPFI-KEHIKNPDWRYRDAAVMAFGCILEGPEPSQLKPLV-IQAMPTLIELMKDPS 421 (876)
T ss_dssp HHHHHHHHHHHHHHHHGGGGHHHHHHHH-HHHTTCSSHHHHHHHHHHHHHTSSSSCHHHHHHHH-HHHHHHHHHHHTCSS
T ss_pred HHHHHHHHHHHHHHHCcHhhHHHHHHHH-HHHccCCChHHHHHHHHHHHHHHcCCCHHHHHHHH-HHHHHHHHHHhCCCC
Confidence 588999998887432 2 334433 34456678999999999999999763 2222222 335677777666666
Q ss_pred hhhhhHHHHHHHHHhCcCCCCcccCCCCcccchHHHHhccCCCcchHHHHHHHHHHHcccC
Q psy4705 74 VKGKRQAAQGLARLGITLNPEVAFPGERSLEVVRPLLSLLHPEATALETFEGLMALCNLAA 134 (164)
Q Consensus 74 ~~~~~~A~~ALakLlIs~nP~l~f~~~~~~~av~pL~~LL~~~~~~l~~fEaLlALTNLAs 134 (164)
+..+..|+.+|.++.-...+..... ......++.|+..++ +. ..-+..++.+|.+++.
T Consensus 422 ~~vr~~a~~~l~~~~~~~~~~~~~~-~~l~~~l~~l~~~l~-~~-~~v~~~a~~al~~l~~ 479 (876)
T 1qgr_A 422 VVVRDTAAWTVGRICELLPEAAIND-VYLAPLLQCLIEGLS-AE-PRVASNVCWAFSSLAE 479 (876)
T ss_dssp HHHHHHHHHHHHHHHHHCGGGTSST-TTHHHHHHHHHHHTT-SC-HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCchhcccH-HHHHHHHHHHHHHHc-CC-HHHHHHHHHHHHHHHH
Confidence 7788889999999976544432111 122457888888887 33 2235567778777763
No 59
>2vgl_B AP-2 complex subunit beta-1; cytoplasmic vesicle, alternative splicing, endocytosis, lipid-binding, golgi apparatus, adaptor, membrane, transport; HET: IHP; 2.59A {Homo sapiens} SCOP: i.23.1.1 PDB: 2jkt_B 2jkr_B* 2xa7_B 1w63_B
Probab=93.83 E-value=0.12 Score=45.70 Aligned_cols=124 Identities=9% Similarity=0.044 Sum_probs=73.9
Q ss_pred ChhHHHHHHHHHHhcC-------hhHHHHHHHhhcccCCHHHHHHHHHHHHHhccchhhH-HHHHhcChHHHHHHHhhcc
Q psy4705 1 MLRRAATQTMTNMIVS-------EDVIKIYEANKDKVESDNTRELLARILNALASQQELR-GLMVQQGASKALIHLAHNG 72 (164)
Q Consensus 1 ~~~~aa~~~l~nli~~-------~~vi~~l~v~l~k~~S~~~k~~~~~il~~Ls~~~~~R-~~ivqqGai~~Ll~l~~~g 72 (164)
+.|++|+.++.++... ++.++.+ ..+....++.++..++..|..++.+.... ..-...+.+..|+....+.
T Consensus 136 ~VRk~A~~al~~i~~~~p~~~~~~~~~~~l-~~lL~d~d~~V~~~A~~aL~~i~~~~~~~~~~~l~~~~~~~Ll~~l~~~ 214 (591)
T 2vgl_B 136 YVRKTAAVCVAKLHDINAQMVEDQGFLDSL-RDLIADSNPMVVANAVAALSEISESHPNSNLLDLNPQNINKLLTALNEC 214 (591)
T ss_dssp HHHHHHHHHHHHHHHSSCCCHHHHHHHHHH-HHTTSCSCHHHHHHHHHHHHHHTTSCCSCCSCCCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHhhChhhcccccHHHHH-HHHhCCCChhHHHHHHHHHHHHHhhCCCccchhccHHHHHHHHHcCCCC
Confidence 3689999999998542 3566776 67777888999999999999999875321 0001113344555543344
Q ss_pred chhhhhHHHHHHHHHhCcCCCCcccCCCCcccchHHHHhccCCCcchHHHHHHHHHHHccc
Q psy4705 73 TVKGKRQAAQGLARLGITLNPEVAFPGERSLEVVRPLLSLLHPEATALETFEGLMALCNLA 133 (164)
Q Consensus 73 t~~~~~~A~~ALakLlIs~nP~l~f~~~~~~~av~pL~~LL~~~~~~l~~fEaLlALTNLA 133 (164)
.+-.+....+.|+++.- .+|.. ..+.++++..+++ +.+..=.|||.-++.++.
T Consensus 215 ~~~~q~~il~~l~~l~~-~~~~~------~~~~l~~l~~~l~-~~~~~V~~ea~~~i~~l~ 267 (591)
T 2vgl_B 215 TEWGQIFILDCLSNYNP-KDDRE------AQSICERVTPRLS-HANSAVVLSAVKVLMKFL 267 (591)
T ss_dssp CHHHHHHHHHHHHTSCC-CSHHH------HHHHHHHHTTCSC-SSTTHHHHHHHHHHHHSC
T ss_pred CchHHHHHHHHHHHhCC-CChHH------HHHHHHHHHHHHc-CCChHHHHHHHHHHHHHh
Confidence 44444445666665531 11111 1235666666665 334445666776666665
No 60
>1u6g_C TIP120 protein, CAND1; cullin repeat, heat repeat, ring finger, ligase; 3.10A {Homo sapiens} SCOP: a.118.1.2 PDB: 4a0c_A
Probab=92.85 E-value=0.39 Score=45.63 Aligned_cols=128 Identities=15% Similarity=0.161 Sum_probs=81.0
Q ss_pred hhHHHHHHHHHHhcCh----------hHHHHHHHhhcccCCHHHHHHHHHHHHHhccchhhHHHHHhcChHHHHHHHhhc
Q psy4705 2 LRRAATQTMTNMIVSE----------DVIKIYEANKDKVESDNTRELLARILNALASQQELRGLMVQQGASKALIHLAHN 71 (164)
Q Consensus 2 ~~~aa~~~l~nli~~~----------~vi~~l~v~l~k~~S~~~k~~~~~il~~Ls~~~~~R~~ivqqGai~~Ll~l~~~ 71 (164)
.|+.|++-+.+.+... .+++.+ .......++.+|..+++.+..++..-.. .. .+--+..|+....+
T Consensus 22 ~R~~A~~~L~~~l~~~~~~~~~~~~~~il~~L-l~~L~d~~~~vR~~A~~~L~~l~~~~~~--~~-~~~i~~~Ll~~l~d 97 (1230)
T 1u6g_C 22 FRFMATNDLMTELQKDSIKLDDDSERKVVKMI-LKLLEDKNGEVQNLAVKCLGPLVSKVKE--YQ-VETIVDTLCTNMLS 97 (1230)
T ss_dssp HHHHHHHHHHHHTSSSCCSCCTTHHHHHHHHH-HHHTTCSSHHHHHHHHHHHHHHHTTSCH--HH-HHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHcccccCCChhHHHHHHHHH-HHHhcCCCHHHHHHHHHHHHHHHHhCCH--HH-HHHHHHHHHHHhcC
Confidence 4788888888876543 567766 4555677899999999999988864211 11 11123344544445
Q ss_pred cchhhhhHHHHHHHHHhCcCCCCc---ccCCCCcccchHHHHhccCCCcchHHHHHHHHHHHccc
Q psy4705 72 GTVKGKRQAAQGLARLGITLNPEV---AFPGERSLEVVRPLLSLLHPEATALETFEGLMALCNLA 133 (164)
Q Consensus 72 gt~~~~~~A~~ALakLlIs~nP~l---~f~~~~~~~av~pL~~LL~~~~~~l~~fEaLlALTNLA 133 (164)
..+..+..|+++|+.+.-...|.. .|......+.+|+|+..+..+.+..-+.+|+.+|.+++
T Consensus 98 ~~~~vR~~a~~~L~~i~~~l~~~~~~~~~~~~~~~~llp~L~~~l~~~~~~~~~~~al~~l~~~~ 162 (1230)
T 1u6g_C 98 DKEQLRDISSIGLKTVIGELPPASSGSALAANVCKKITGRLTSAIAKQEDVSVQLEALDIMADML 162 (1230)
T ss_dssp SSSHHHHHHHHHHHHHHHHCC-----CCTHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHHHhCCCcccccchHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHH
Confidence 556667778999999876555431 11111124588899998873244456677888887775
No 61
>2qk1_A Protein STU2; STU2P, XMAP215, DIS1, TOG, CH-TOG, heat repeat, microtubule plus END, +TIP, protein binding; 1.70A {Saccharomyces cerevisiae}
Probab=91.26 E-value=1.8 Score=34.14 Aligned_cols=125 Identities=11% Similarity=0.106 Sum_probs=78.0
Q ss_pred hHHHHHHHHH-HhcC-----------hhHHHHHHHhhc-ccCCHHHHHHHHHHHHHhccchhhH-HHHH-h--cChHHHH
Q psy4705 3 RRAATQTMTN-MIVS-----------EDVIKIYEANKD-KVESDNTRELLARILNALASQQELR-GLMV-Q--QGASKAL 65 (164)
Q Consensus 3 ~~aa~~~l~n-li~~-----------~~vi~~l~v~l~-k~~S~~~k~~~~~il~~Ls~~~~~R-~~iv-q--qGai~~L 65 (164)
|++|.+.+.. ++.. .+++..+ .... +..+..++..+.+++..|+..- + ..+. + .--+..+
T Consensus 33 Rk~al~~L~~~~~~~~~~i~~~~~~~~~~~~~L-~~~l~~D~n~~v~~~A~~al~~la~~l--~~~~f~~~y~~~llp~l 109 (249)
T 2qk1_A 33 RVEALEEFWDSVLSQTKKLKSTSQNYSNLLGIY-GHIIQKDANIQAVALAAQSVELICDKL--KTPGFSKDYVSLVFTPL 109 (249)
T ss_dssp HHHHHHHHHHHTGGGCCCBCCTTCCCHHHHHHH-HHHHHHCSCHHHHHHHHHHHHHHHHHH--CTTTSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCccccCcccHHHHHHHH-HHHhccCCCHHHHHHHHHHHHHHHHhc--ccccccHHHHHHHHHHH
Confidence 7899999998 7521 3455554 3334 6678889999999999999432 2 1111 0 1124455
Q ss_pred HHHhhccchhhhhHHHHHHHHHhCcCCCCcccCCCCcccchHHHHhccCCCcchHHHHHHHHHHHccc
Q psy4705 66 IHLAHNGTVKGKRQAAQGLARLGITLNPEVAFPGERSLEVVRPLLSLLHPEATALETFEGLMALCNLA 133 (164)
Q Consensus 66 l~l~~~gt~~~~~~A~~ALakLlIs~nP~l~f~~~~~~~av~pL~~LL~~~~~~l~~fEaLlALTNLA 133 (164)
++..++.....+..+..||-.+.-+.||...++ .....++.|+..|. ..+-.-+.+++..|+.++
T Consensus 110 l~~l~dkk~~V~~aa~~al~~i~~~~~~~~~~~--~l~~ll~~l~~~l~-~k~~~vk~~al~~l~~~~ 174 (249)
T 2qk1_A 110 LDRTKEKKPSVIEAIRKALLTICKYYDPLASSG--RNEDMLKDILEHMK-HKTPQIRMECTQLFNASM 174 (249)
T ss_dssp HHGGGCCCHHHHHHHHHHHHHHHHHSCTTCTTC--TTHHHHHHHHHHTT-CSSHHHHHHHHHHHHHHH
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHccccccCC--cHHHHHHHHHHHHc-CCChHHHHHHHHHHHHHH
Confidence 555555556666777888888888888854331 12346677777776 334455666666666665
No 62
>1ibr_B P95, importin beta-1 subunit, nuclear factor; small GTPase, nuclear transport receptor, cell cycle, translation; HET: GNP; 2.30A {Homo sapiens} SCOP: a.118.1.1 PDB: 1m5n_S 1gcj_A 1f59_A 1o6o_A 1o6p_A
Probab=90.87 E-value=0.69 Score=37.92 Aligned_cols=125 Identities=12% Similarity=0.053 Sum_probs=75.6
Q ss_pred hhHHHHHHHHHHhc--ChhHHHHHHHhhcccC--CHHHHHHHHHHHHHhccchh--hHHH----------HHhcChHHHH
Q psy4705 2 LRRAATQTMTNMIV--SEDVIKIYEANKDKVE--SDNTRELLARILNALASQQE--LRGL----------MVQQGASKAL 65 (164)
Q Consensus 2 ~~~aa~~~l~nli~--~~~vi~~l~v~l~k~~--S~~~k~~~~~il~~Ls~~~~--~R~~----------ivqqGai~~L 65 (164)
.|++|.+.+.++-. .++....+ ..+...+ .+.+|..++-+|-++..... ..+. =.++.--..|
T Consensus 17 ~r~~Ae~~L~~~~~~~~~~~~~~L-~~il~~~~~~~~vR~~a~~~Lk~~i~~~~~~~~~~~~~~~~~l~~~~~~~ik~~l 95 (462)
T 1ibr_B 17 ELEAAQKFLERAAVENLPTFLVEL-SRVLANPGNSQVARVAAGLQIKNSLTSKDPDIKAQYQQRWLAIDANARREVKNYV 95 (462)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH-HHHHHCTTSCHHHHHHHHHHHHHHHCCSSHHHHHHHHHHHHTSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhChHHHHHHH-HHHHHcCCCChHHHHHHHHHHHHhccccchHHHHHHHhhhhcCCHHHHHHHHHHH
Confidence 47888888888665 36777766 3444333 68899999988888864320 0000 0111111234
Q ss_pred HHHhhccchhhhhHHHHHHHHHhCcCCCCcccCCCCcccchHHHHhccCCCc-chHHHHHHHHHHHccc
Q psy4705 66 IHLAHNGTVKGKRQAAQGLARLGITLNPEVAFPGERSLEVVRPLLSLLHPEA-TALETFEGLMALCNLA 133 (164)
Q Consensus 66 l~l~~~gt~~~~~~A~~ALakLlIs~nP~l~f~~~~~~~av~pL~~LL~~~~-~~l~~fEaLlALTNLA 133 (164)
++...+..+.. ..++++++.|....-|.-. --+.+|.|+..+..+. +...+.-++.+|.++.
T Consensus 96 l~~l~~~~~~v-~~~~~~i~~ia~~~~~~~~-----w~~ll~~L~~~l~~~~~~~~~r~~al~~l~~l~ 158 (462)
T 1ibr_B 96 LQTLGTETYRP-SSASQCVAGIACAEIPVNQ-----WPELIPQLVANVTNPNSTEHMKESTLEAIGYIC 158 (462)
T ss_dssp HHHTTCCCSSS-CSHHHHHHHHHHHHGGGTC-----CTTHHHHHHHHHHCTTCCHHHHHHHHHHHHHHH
T ss_pred HHHhCCCCchh-hHHHHHHHHHHHHhccccc-----cHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHH
Confidence 55444545555 6688999999766545311 2457888998886331 4455666777777765
No 63
>2bpt_A Importin beta-1 subunit; nuclear transport, nucleocytoplasmic transport, nuclear trafficking, importin- beta, complex; 1.99A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 2bku_B 3ea5_B* 3nd2_A
Probab=89.37 E-value=2.4 Score=37.74 Aligned_cols=111 Identities=14% Similarity=0.170 Sum_probs=68.2
Q ss_pred hhHHHHHHHHHHhcC--hhHHHHHH---HhhcccCCHHHHHHHHHHHHHhccch--hhHHHHHhcChHHHHHHHhhccch
Q psy4705 2 LRRAATQTMTNMIVS--EDVIKIYE---ANKDKVESDNTRELLARILNALASQQ--ELRGLMVQQGASKALIHLAHNGTV 74 (164)
Q Consensus 2 ~~~aa~~~l~nli~~--~~vi~~l~---v~l~k~~S~~~k~~~~~il~~Ls~~~--~~R~~ivqqGai~~Ll~l~~~gt~ 74 (164)
.|++|.+++.++... +.+++.+. .....+.+...|+.+...+..++... +.-..... ..+..|+.......+
T Consensus 347 ~r~~a~~~L~~l~~~~~~~~~~~l~~~l~~~l~~~~~~~r~~a~~~l~~i~~~~~~~~~~~~l~-~il~~l~~~l~d~~~ 425 (861)
T 2bpt_A 347 VSMSAGACLQLFAQNCGNHILEPVLEFVEQNITADNWRNREAAVMAFGSIMDGPDKVQRTYYVH-QALPSILNLMNDQSL 425 (861)
T ss_dssp HHHHHHHHHHHHHHHHGGGGHHHHHHHHHHHTTCSSHHHHHHHHHHHHHTSSSSCHHHHHHHHH-HHHHHHHHGGGCSCH
T ss_pred HHHHHHHHHHHHHHHccHhHHHHHHHHHHHHcCCCChhHHHHHHHHHHHHHcCCCHHHHHHHHH-HHHHHHHHHcCCCcH
Confidence 578899998887532 23344331 34455677899999999999999753 21112222 245556665555566
Q ss_pred hhhhHHHHHHHHHhCcCCCCcccCCCCcccchHHHHhccC
Q psy4705 75 KGKRQAAQGLARLGITLNPEVAFPGERSLEVVRPLLSLLH 114 (164)
Q Consensus 75 ~~~~~A~~ALakLlIs~nP~l~f~~~~~~~av~pL~~LL~ 114 (164)
..+..++++|+++.-...|... +.......+++|+..++
T Consensus 426 ~vr~~a~~~l~~l~~~~~~~~~-~~~~~~~~l~~l~~~l~ 464 (861)
T 2bpt_A 426 QVKETTAWCIGRIADSVAESID-PQQHLPGVVQACLIGLQ 464 (861)
T ss_dssp HHHHHHHHHHHHHHHHHGGGSC-TTTTHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHhhhhcC-CHHHHHHHHHHHHHHhc
Confidence 7777788999998755433210 11112357788888776
No 64
>1ibr_B P95, importin beta-1 subunit, nuclear factor; small GTPase, nuclear transport receptor, cell cycle, translation; HET: GNP; 2.30A {Homo sapiens} SCOP: a.118.1.1 PDB: 1m5n_S 1gcj_A 1f59_A 1o6o_A 1o6p_A
Probab=89.28 E-value=2.6 Score=34.34 Aligned_cols=95 Identities=12% Similarity=0.074 Sum_probs=60.6
Q ss_pred HHHHHHHHHHHHhccchhhHHHHHhcChHHHHHHHhhccchhhhhHHHHHHHHHhCcCCCCcccCCCCcccchHHHHhcc
Q psy4705 34 NTRELLARILNALASQQELRGLMVQQGASKALIHLAHNGTVKGKRQAAQGLARLGITLNPEVAFPGERSLEVVRPLLSLL 113 (164)
Q Consensus 34 ~~k~~~~~il~~Ls~~~~~R~~ivqqGai~~Ll~l~~~gt~~~~~~A~~ALakLlIs~nP~l~f~~~~~~~av~pL~~LL 113 (164)
..|..++..+..++..-. ..+. ...++.+.+...+.....|.-|..+|+.++-..+|.. +.. ...+.+|+++.+|
T Consensus 343 ~~r~~a~~~L~~l~~~~~--~~~~-~~~~~~l~~~l~~~~~~~r~aal~~l~~l~~~~~~~~-~~~-~l~~~~~~l~~~l 417 (462)
T 1ibr_B 343 NPCKAAGVCLMLLATCCE--DDIV-PHVLPFIKEHIKNPDWRYRDAAVMAFGCILEGPEPSQ-LKP-LVIQAMPTLIELM 417 (462)
T ss_dssp SHHHHHHHHHHHHHHHTT--TTHH-HHHHHHHHHHTTCSSHHHHHHHHHHHHHTSSSSCTTT-TCT-TTTTHHHHHHHGG
T ss_pred hHHHHHHHHHHHHHHhcc--HHHH-HHHHHHHHHHhcCCChHHHHHHHHHHHHHhcCCcHHH-HHH-HHHHHHHHHHHHh
Confidence 456666666666655422 1111 2233334444445566778889999999976555432 222 2356899999999
Q ss_pred CCCcchHHHHHHHHHHHcccC
Q psy4705 114 HPEATALETFEGLMALCNLAA 134 (164)
Q Consensus 114 ~~~~~~l~~fEaLlALTNLAs 134 (164)
. |.+..=+..|..+|.+++.
T Consensus 418 ~-d~~~~Vr~~a~~~l~~~~~ 437 (462)
T 1ibr_B 418 K-DPSVVVRDTAAWTVGRICE 437 (462)
T ss_dssp G-CSCHHHHHHHHHHHHHHHH
T ss_pred c-CCCHHHHHHHHHHHHHHHH
Confidence 7 6666678889999999984
No 65
>3b2a_A TON_1937, putative uncharacterized protein; heat-repeats, hypothetical, unknown function; 2.20A {Thermococcus onnurineus}
Probab=89.04 E-value=2.3 Score=34.89 Aligned_cols=86 Identities=14% Similarity=0.047 Sum_probs=50.8
Q ss_pred HHHHhccchhhHHHHHhcChHHHHH------------------HHhhccchhhhhHHHHHHHHHhCcCCCCcccCCCCcc
Q psy4705 42 ILNALASQQELRGLMVQQGASKALI------------------HLAHNGTVKGKRQAAQGLARLGITLNPEVAFPGERSL 103 (164)
Q Consensus 42 il~~Ls~~~~~R~~ivqqGai~~Ll------------------~l~~~gt~~~~~~A~~ALakLlIs~nP~l~f~~~~~~ 103 (164)
-+..++.+++.|..+-+--+++.|+ ++..++.+-....|+..|.++-+.. ...
T Consensus 79 ~iI~llk~~dEkval~A~r~L~~LLe~vpL~~~~y~Kl~~aL~dlik~~~~il~~eaae~Lgklkv~~---------~~~ 149 (265)
T 3b2a_A 79 VFINALSQENEKVTIKALRALGYLVKDVPMGSKTFLKAAKTLVSLLESPDDMMRIETIDVLSKLQPLE---------DSK 149 (265)
T ss_dssp HHHHTCCSTTHHHHHHHHHHHHHHHTTCCBCHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHCCBSC---------CCH
T ss_pred HHHHHHhccchhHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhcCCCchHHHHHHHHhCcCCccc---------chH
Confidence 3444555555555555555555444 3333344444566777777772111 123
Q ss_pred cchHHHHhccCCCcchHHHHHHHHHHHcccCCCh
Q psy4705 104 EVVRPLLSLLHPEATALETFEGLMALCNLAAIGE 137 (164)
Q Consensus 104 ~av~pL~~LL~~~~~~l~~fEaLlALTNLAs~~~ 137 (164)
..+-.+.+|++ +.+..-+-=|+.+|||+|+.++
T Consensus 150 ~V~~~l~sLl~-Skd~~vK~agl~~L~eia~~S~ 182 (265)
T 3b2a_A 150 LVRTYINELVV-SPDLYTKVAGFCLFLNMLNSSA 182 (265)
T ss_dssp HHHHHHHHHHT-CSSHHHHHHHHHHHHHHGGGCS
T ss_pred HHHHHHHHHHh-CCChhHHHHHHHHHHHhhcccC
Confidence 46678888996 5665555669999999999663
No 66
>1u6g_C TIP120 protein, CAND1; cullin repeat, heat repeat, ring finger, ligase; 3.10A {Homo sapiens} SCOP: a.118.1.2 PDB: 4a0c_A
Probab=86.82 E-value=5.2 Score=37.90 Aligned_cols=130 Identities=12% Similarity=0.076 Sum_probs=79.5
Q ss_pred hhHHHHHHHHHHhcC------hhHHHHHHHhhcccCCHHHHHHHHHHHHHhccchhhH------HHHHhcChHHHHHHHh
Q psy4705 2 LRRAATQTMTNMIVS------EDVIKIYEANKDKVESDNTRELLARILNALASQQELR------GLMVQQGASKALIHLA 69 (164)
Q Consensus 2 ~~~aa~~~l~nli~~------~~vi~~l~v~l~k~~S~~~k~~~~~il~~Ls~~~~~R------~~ivqqGai~~Ll~l~ 69 (164)
.|++|+.++.+++.. +.+++.+ ......+++.+|..++..+..++..-... ..-....-++.|++..
T Consensus 64 vR~~A~~~L~~l~~~~~~~~~~~i~~~L-l~~l~d~~~~vR~~a~~~L~~i~~~l~~~~~~~~~~~~~~~~llp~L~~~l 142 (1230)
T 1u6g_C 64 VQNLAVKCLGPLVSKVKEYQVETIVDTL-CTNMLSDKEQLRDISSIGLKTVIGELPPASSGSALAANVCKKITGRLTSAI 142 (1230)
T ss_dssp HHHHHHHHHHHHHTTSCHHHHHHHHHHH-HHHTTCSSSHHHHHHHHHHHHHHHHCC-----CCTHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHH-HHHhcCCcHHHHHHHHHHHHHHHHhCCCcccccchHHHHHHHHHHHHHHHH
Confidence 589999999998643 3344444 33345667788888888887777552211 1111223455556544
Q ss_pred h-ccchhhhhHHHHHHHHHhCcCCCCcccCCCCcccchHHHHhccCCCcchHHHHHHHHHHHcccCCC
Q psy4705 70 H-NGTVKGKRQAAQGLARLGITLNPEVAFPGERSLEVVRPLLSLLHPEATALETFEGLMALCNLAAIG 136 (164)
Q Consensus 70 ~-~gt~~~~~~A~~ALakLlIs~nP~l~f~~~~~~~av~pL~~LL~~~~~~l~~fEaLlALTNLAs~~ 136 (164)
. ......+..|..+|..++-...+.+ ..+ ..+.++.|+..+. +.+..-+-.|+.||..++...
T Consensus 143 ~~~~~~~~~~~al~~l~~~~~~~~~~l--~~~-~~~ll~~l~~~L~-~~~~~vR~~a~~al~~l~~~~ 206 (1230)
T 1u6g_C 143 AKQEDVSVQLEALDIMADMLSRQGGLL--VNF-HPSILTCLLPQLT-SPRLAVRKRTIIALGHLVMSC 206 (1230)
T ss_dssp SCCSCHHHHHHHHHHHHHHHHHTCSSC--TTT-HHHHHHHHGGGGG-CSSHHHHHHHHHHHHHHTTTC
T ss_pred cCCCchHHHHHHHHHHHHHHHHhHhHH--HHH-HHHHHHHHHHHHc-CCcHHHHHHHHHHHHHHHHhc
Confidence 4 3445667778899999864332222 111 2347778888776 444455667888888888653
No 67
>2bpt_A Importin beta-1 subunit; nuclear transport, nucleocytoplasmic transport, nuclear trafficking, importin- beta, complex; 1.99A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 2bku_B 3ea5_B* 3nd2_A
Probab=85.61 E-value=7.2 Score=34.65 Aligned_cols=126 Identities=12% Similarity=0.000 Sum_probs=73.9
Q ss_pred hhHHHHHHHHHHhcC--hhHHHHHHHhhccc--CCHHHHHHHHHHHHHhccch--hhHHH--------H---HhcChHHH
Q psy4705 2 LRRAATQTMTNMIVS--EDVIKIYEANKDKV--ESDNTRELLARILNALASQQ--ELRGL--------M---VQQGASKA 64 (164)
Q Consensus 2 ~~~aa~~~l~nli~~--~~vi~~l~v~l~k~--~S~~~k~~~~~il~~Ls~~~--~~R~~--------i---vqqGai~~ 64 (164)
.|+.|.+.+.++-.+ ++....+ ..+... .++.+|..++.+|-+..... ...+. + .++.--..
T Consensus 21 ~r~~Ae~~L~~~~~~~~~~~~~~l-~~il~~~~~~~~vR~~A~~~lk~~i~~~w~~~~~~~~~~~~~~l~~~~~~~ik~~ 99 (861)
T 2bpt_A 21 IRLTSETQLKKLSNDNFLQFAGLS-SQVLIDENTKLEGRILAALTLKNELVSKDSVKTQQFAQRWITQVSPEAKNQIKTN 99 (861)
T ss_dssp HHHHHHHHHHHHHHHCHHHHHHHH-HHHHTCTTSCHHHHHHHHHHHHTTTCCSSHHHHHHHHHHHHHHSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhCHHHHHHHH-HHHHhCCCCChHHHHHHHHHHHhhccCcChHHHHHHHHhHhhhCCHHHHHHHHHH
Confidence 478888888887654 7777776 344333 36889999998888875321 00000 0 11111224
Q ss_pred HHHHhhccchhhhhHHHHHHHHHhCcCCCCcccCCCCcccchHHHHhccCCCcchHHHHHHHHHHHccc
Q psy4705 65 LIHLAHNGTVKGKRQAAQGLARLGITLNPEVAFPGERSLEVVRPLLSLLHPEATALETFEGLMALCNLA 133 (164)
Q Consensus 65 Ll~l~~~gt~~~~~~A~~ALakLlIs~nP~l~f~~~~~~~av~pL~~LL~~~~~~l~~fEaLlALTNLA 133 (164)
|++...+..+..+..++++++.|....-|.- .--+.++.|+..+..+.+...+..++.+|..+.
T Consensus 100 ll~~l~~~~~~vr~~~~~~l~~i~~~~~p~~-----~w~~ll~~L~~~l~~~~~~~~r~~al~~l~~l~ 163 (861)
T 2bpt_A 100 ALTALVSIEPRIANAAAQLIAAIADIELPHG-----AWPELMKIMVDNTGAEQPENVKRASLLALGYMC 163 (861)
T ss_dssp HHHHHTCSSHHHHHHHHHHHHHHHHHHGGGT-----CCHHHHHHHHHHTSTTSCHHHHHHHHHHHHHHH
T ss_pred HHHHHCCCchHHHHHHHHHHHHHHHhhCccc-----ccHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHH
Confidence 5555555667778888999999866543321 123577788888863313334444555554443
No 68
>3b2a_A TON_1937, putative uncharacterized protein; heat-repeats, hypothetical, unknown function; 2.20A {Thermococcus onnurineus}
Probab=84.50 E-value=6.3 Score=32.30 Aligned_cols=116 Identities=11% Similarity=0.044 Sum_probs=69.6
Q ss_pred HHHHHHHHhcC--------hhHHHHHHHhhcccCCHHHHHHHHHHHHHhccchhhHHHHHhcChHHHHHHHhhccchhhh
Q psy4705 6 ATQTMTNMIVS--------EDVIKIYEANKDKVESDNTRELLARILNALASQQELRGLMVQQGASKALIHLAHNGTVKGK 77 (164)
Q Consensus 6 a~~~l~nli~~--------~~vi~~l~v~l~k~~S~~~k~~~~~il~~Ls~~~~~R~~ivqqGai~~Ll~l~~~gt~~~~ 77 (164)
|.+|+..++.+ ..+.+.+ .++.+++++-.++.++..+..+.--...+ +-+..+.++..+.....|
T Consensus 95 A~r~L~~LLe~vpL~~~~y~Kl~~aL-~dlik~~~~il~~eaae~Lgklkv~~~~~------~V~~~l~sLl~Skd~~vK 167 (265)
T 3b2a_A 95 ALRALGYLVKDVPMGSKTFLKAAKTL-VSLLESPDDMMRIETIDVLSKLQPLEDSK------LVRTYINELVVSPDLYTK 167 (265)
T ss_dssp HHHHHHHHHTTCCBCHHHHHHHHHHH-HHHTTSCCHHHHHHHHHHHHHCCBSCCCH------HHHHHHHHHHTCSSHHHH
T ss_pred HHHHHHHHHcCCCCCHHHHHHHHHHH-HHHhcCCCchHHHHHHHHhCcCCcccchH------HHHHHHHHHHhCCChhHH
Confidence 55666666544 3444555 56677777777777777777772222122 224455666655556778
Q ss_pred hHHHHHHHHHhC-cCCCCcccCCCCcccchHHHHhccCCCcchHHHHHHHHHHHcccCC
Q psy4705 78 RQAAQGLARLGI-TLNPEVAFPGERSLEVVRPLLSLLHPEATALETFEGLMALCNLAAI 135 (164)
Q Consensus 78 ~~A~~ALakLlI-s~nP~l~f~~~~~~~av~pL~~LL~~~~~~l~~fEaLlALTNLAs~ 135 (164)
..|..+|-.++. |.||.+.= +.++-+-++|+.....+..+ ||-+|-+..+.
T Consensus 168 ~agl~~L~eia~~S~D~~i~~------~I~~eI~elL~~eD~~l~e~-aLd~Le~ils~ 219 (265)
T 3b2a_A 168 VAGFCLFLNMLNSSADSGHLT------LILDEIPSLLQNDNEFIVEL-ALDVLEKALSF 219 (265)
T ss_dssp HHHHHHHHHHGGGCSSCCCGG------GTTTTHHHHHTCSCHHHHHH-HHHHHHHHTTS
T ss_pred HHHHHHHHHhhcccCCHHHHH------HHHHHHHHHHcCCCHHHHHH-HHHHHHHHHcC
Confidence 888999999955 55666531 23334556666443334343 77777777765
No 69
>1w63_A Adapter-related protein complex 1 gamma 1 subunit; endocytosis, clathrin adaptor, transport, coated PITS; 4.0A {Mus musculus} SCOP: i.23.1.1
Probab=84.27 E-value=4.9 Score=35.63 Aligned_cols=98 Identities=13% Similarity=0.089 Sum_probs=68.6
Q ss_pred hcccCCHHHHHHHHHHHHHhccchhhHHHHHhcChHHHHHHHhhccchhhhhHHHHHHHHHhCcCCCCcccCCCCcccch
Q psy4705 27 KDKVESDNTRELLARILNALASQQELRGLMVQQGASKALIHLAHNGTVKGKRQAAQGLARLGITLNPEVAFPGERSLEVV 106 (164)
Q Consensus 27 l~k~~S~~~k~~~~~il~~Ls~~~~~R~~ivqqGai~~Ll~l~~~gt~~~~~~A~~ALakLlIs~nP~l~f~~~~~~~av 106 (164)
-.++.++..|..+.+.+.++...+ ++ +.-+..+..+.....+..|..|+.++.++.- .+|.++ .+.+
T Consensus 115 DL~~~n~~vr~lAL~~L~~i~~~~-----~~-~~l~~~l~~~L~~~~~~VRk~A~~al~~l~~-~~p~~v------~~~~ 181 (618)
T 1w63_A 115 DLNHSTQFVQGLALCTLGCMGSSE-----MC-RDLAGEVEKLLKTSNSYLRKKAALCAVHVIR-KVPELM------EMFL 181 (618)
T ss_dssp HHSCSSSHHHHHHHHHHHHHCCHH-----HH-HHHHHHHHHHHHSCCHHHHHHHHHHHHHHHH-HCGGGG------GGGG
T ss_pred hcCCCCHhHHHHHHHHHHhcCCHH-----HH-HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHH-HChHHH------HHHH
Confidence 345678888999999999888532 32 2334555556666678889999999999965 467643 2356
Q ss_pred HHHHhccCCCcchHHHHHHHHHHHcccCCChH
Q psy4705 107 RPLLSLLHPEATALETFEGLMALCNLAAIGEK 138 (164)
Q Consensus 107 ~pL~~LL~~~~~~l~~fEaLlALTNLAs~~~~ 138 (164)
+.+..+|. |.+..=.+-|+.+|..++..+++
T Consensus 182 ~~l~~lL~-D~d~~V~~~Al~~L~~i~~~~~~ 212 (618)
T 1w63_A 182 PATKNLLN-EKNHGVLHTSVVLLTEMCERSPD 212 (618)
T ss_dssp GGTTTSTT-CCCHHHHHHHHHHHHHHCCSHHH
T ss_pred HHHHHHhC-CCCHhHHHHHHHHHHHHHHhChH
Confidence 67777887 66655567788899888865433
No 70
>1qgr_A Protein (importin beta subunit); transport receptor, nuclear import, heat motif, NLS-binding; 2.30A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qgk_A 2p8q_A 2q5d_A 3lww_A 1ukl_A 2qna_A
Probab=83.83 E-value=5.3 Score=35.59 Aligned_cols=125 Identities=13% Similarity=0.038 Sum_probs=71.6
Q ss_pred hhHHHHHHHHHHhcC--hhHHHHHHHhhccc--CCHHHHHHHHHHHHHhcc-chhhHHHHH-----------hcChHHHH
Q psy4705 2 LRRAATQTMTNMIVS--EDVIKIYEANKDKV--ESDNTRELLARILNALAS-QQELRGLMV-----------QQGASKAL 65 (164)
Q Consensus 2 ~~~aa~~~l~nli~~--~~vi~~l~v~l~k~--~S~~~k~~~~~il~~Ls~-~~~~R~~iv-----------qqGai~~L 65 (164)
.|+.|.+.+.++..+ +++...+ ...... .++.+|..++.+|-+... +.+.|.... ++.--..|
T Consensus 17 ~r~~A~~~L~~~~~~~~~~~~~~L-~~~l~~~~~~~~vR~~a~~~Lk~~i~~~~~~~~~~~~~~w~~l~~~~~~~ik~~l 95 (876)
T 1qgr_A 17 ELEAAQKFLERAAVENLPTFLVEL-SRVLANPGNSQVARVAAGLQIKNSLTSKDPDIKAQYQQRWLAIDANARREVKNYV 95 (876)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH-HHHHHCTTSCHHHHHHHHHHHHHHHCCSSHHHHHHHHHHHHTSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcChhhHHHHH-HHHHhCCCCCHHHHHHHHHHHHHhccccchHhHHHHHhhhccCCHHHHHHHHHHH
Confidence 478899989887765 7777776 344333 358889999888877542 211111110 01111124
Q ss_pred HHHhhccchhhhhHHHHHHHHHhCcCCCCcccCCCCcccchHHHHhccCCCc-chHHHHHHHHHHHccc
Q psy4705 66 IHLAHNGTVKGKRQAAQGLARLGITLNPEVAFPGERSLEVVRPLLSLLHPEA-TALETFEGLMALCNLA 133 (164)
Q Consensus 66 l~l~~~gt~~~~~~A~~ALakLlIs~nP~l~f~~~~~~~av~pL~~LL~~~~-~~l~~fEaLlALTNLA 133 (164)
++...+..+.. ..++++++.|+...-|.- .--+.++.|+..+..+. +...+..++.+|..+.
T Consensus 96 l~~l~~~~~~~-~~~~~~l~~i~~~~~~~~-----~w~~ll~~l~~~l~~~~~~~~~r~~al~~l~~l~ 158 (876)
T 1qgr_A 96 LHTLGTETYRP-SSASQCVAGIACAEIPVN-----QWPELIPQLVANVTNPNSTEHMKESTLEAIGYIC 158 (876)
T ss_dssp HHHTTTCCSSS-CHHHHHHHHHHHHHGGGT-----CCTTHHHHHHHHHHCTTCCHHHHHHHHHHHHHHH
T ss_pred HHHhCCCcHHH-HHHHHHHHHHHHhhCccc-----ccHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHH
Confidence 44444444455 668888888866543321 22457888888886331 4444555666666554
No 71
>1w63_A Adapter-related protein complex 1 gamma 1 subunit; endocytosis, clathrin adaptor, transport, coated PITS; 4.0A {Mus musculus} SCOP: i.23.1.1
Probab=83.72 E-value=2.8 Score=37.21 Aligned_cols=99 Identities=13% Similarity=0.121 Sum_probs=60.4
Q ss_pred hhHHHHHHHHHHhcC-hhHH----HHHHHhhcccCCHHHHHHHHHHHHHhccchhhHHHHHhcChHHHHHHHhhccchhh
Q psy4705 2 LRRAATQTMTNMIVS-EDVI----KIYEANKDKVESDNTRELLARILNALASQQELRGLMVQQGASKALIHLAHNGTVKG 76 (164)
Q Consensus 2 ~~~aa~~~l~nli~~-~~vi----~~l~v~l~k~~S~~~k~~~~~il~~Ls~~~~~R~~ivqqGai~~Ll~l~~~gt~~~ 76 (164)
+|.+|..++..+... +..+ +.+ ..+.......+|..+..+++.++.+... ..+ ++-|++...+.....
T Consensus 329 vr~~aL~~L~~i~~~~p~~~~~~~~~i-~~~l~d~d~~Ir~~alelL~~l~~~~nv-~~i-----v~eL~~~l~~~d~e~ 401 (618)
T 1w63_A 329 IRYVALTSLLKTVQTDHNAVQRHRSTI-VDCLKDLDVSIKRRAMELSFALVNGNNI-RGM-----MKELLYFLDSCEPEF 401 (618)
T ss_dssp THHHHHHHHHHHHHHHHHHHGGGHHHH-HHGGGSSCHHHHHHHHHHHHHHCCSSST-HHH-----HHHHHHHHHHCCHHH
T ss_pred hHHHHHHHHHHHHhhCHHHHHHHHHHH-HHHccCCChhHHHHHHHHHHHHcccccH-HHH-----HHHHHHHHHhCCHHH
Confidence 455566666555432 1222 222 2334556688899999999999887543 223 356666555556778
Q ss_pred hhHHHHHHHHHhCcCCCCcccCCCCcccchHHHHhccC
Q psy4705 77 KRQAAQGLARLGITLNPEVAFPGERSLEVVRPLLSLLH 114 (164)
Q Consensus 77 ~~~A~~ALakLlIs~nP~l~f~~~~~~~av~pL~~LL~ 114 (164)
|..+.+++++++..-.|.. ...|+.|+.+|.
T Consensus 402 r~~~v~~I~~la~k~~~~~-------~~~v~~ll~lL~ 432 (618)
T 1w63_A 402 KADCASGIFLAAEKYAPSK-------RWHIDTIMRVLT 432 (618)
T ss_dssp HHHHHHHHHHHHHSSCCCH-------HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCccH-------HHHHHHHHHHHH
Confidence 8889999999987544331 224556666665
No 72
>3ebb_A Phospholipase A2-activating protein; armadillo repeat, structural genomics consortium, SGC, WD repeat, acetylation, ATP-binding; 1.90A {Homo sapiens}
Probab=79.08 E-value=18 Score=29.80 Aligned_cols=115 Identities=16% Similarity=0.049 Sum_probs=67.4
Q ss_pred cCCHHHHHHHHHHHHHhccchhhHHHHHhcChHHHHHHHhhc----cchhhhhHHHHHHHHHhCcCCCCcccCCCCcccc
Q psy4705 30 VESDNTRELLARILNALASQQELRGLMVQQGASKALIHLAHN----GTVKGKRQAAQGLARLGITLNPEVAFPGERSLEV 105 (164)
Q Consensus 30 ~~S~~~k~~~~~il~~Ls~~~~~R~~ivqqGai~~Ll~l~~~----gt~~~~~~A~~ALakLlIs~nP~l~f~~~~~~~a 105 (164)
.+++..+-.+.|++.|+-..+..|..+... ...+++.... .....+.-++-.+.++++...-.--+. .....
T Consensus 159 ~~~p~n~ml~lR~l~NlF~~~~g~~~l~~~--~~~il~~~~~~~~~~nknl~iA~ATl~~NlAv~~~~~~~~~--~~~~l 234 (304)
T 3ebb_A 159 KGKPANQLLALRTFCNCFVGQAGQKLMMSQ--RESLMSHAIELKSGSNKNIHIALATLALNYSVCFHKDHNIE--GKAQC 234 (304)
T ss_dssp TSCHHHHHHHHHHHHHGGGSHHHHHHHHHT--HHHHHHHHHGGGSSCCHHHHHHHHHHHHHHHHHHHHSCCHH--HHHHH
T ss_pred CCChHHHHHHHHHHHHccCCchhHHHHHHH--HHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHhhcCCch--HHHHH
Confidence 346767888999999999999988887764 2334443221 122334444555556644321100010 01113
Q ss_pred hHHHHhccCCCcchHHHHHHHHHHHcccCCChHHHHHHHhccc
Q psy4705 106 VRPLLSLLHPEATALETFEGLMALCNLAAIGEKQRQRKKLNFR 148 (164)
Q Consensus 106 v~pL~~LL~~~~~~l~~fEaLlALTNLAs~~~~~r~~Iv~~~~ 148 (164)
...+..+++...+..-.|..|+||.||.+.+++.++..-.-+|
T Consensus 235 l~~l~~il~~~~d~EalyR~LvALGtL~~~~~~~~~lak~l~~ 277 (304)
T 3ebb_A 235 LSLISTILEVVQDLEATFRLLVALGTLISDDSNAVQLAKSLGV 277 (304)
T ss_dssp HHHHHHHHTTCCCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTH
T ss_pred HHHHHHHHhccCCHHHHHHHHHHHHHHHhCChhHHHHHHHcCH
Confidence 3344445554456678899999999999987665554444444
No 73
>2db0_A 253AA long hypothetical protein; heat repeats, helical structure, structural genomics; 2.20A {Pyrococcus horikoshii}
Probab=74.69 E-value=31 Score=27.62 Aligned_cols=40 Identities=23% Similarity=0.360 Sum_probs=32.0
Q ss_pred chHHHHhccCCCcchHHHHHHHHHHHcccCCChHHHHHHHh
Q psy4705 105 VVRPLLSLLHPEATALETFEGLMALCNLAAIGEKQRQRKKL 145 (164)
Q Consensus 105 av~pL~~LL~~~~~~l~~fEaLlALTNLAs~~~~~r~~Iv~ 145 (164)
-.|-|+.||+ |.+.-=.--|.-+|+|||..++..|+.|.+
T Consensus 182 fLprL~aLL~-D~deiVRaSaVEtL~~lA~~npklRkii~~ 221 (253)
T 2db0_A 182 FLPRIINLLH-DGDEIVRASAVEALVHLATLNDKLRKVVIK 221 (253)
T ss_dssp GHHHHHGGGG-CSSHHHHHHHHHHHHHHHTSCHHHHHHHHH
T ss_pred chHHHHHHHc-CcchhhhHHHHHHHHHHHHcCHHHHHHHHH
Confidence 3455677998 777666677888999999999998888876
No 74
>2qk1_A Protein STU2; STU2P, XMAP215, DIS1, TOG, CH-TOG, heat repeat, microtubule plus END, +TIP, protein binding; 1.70A {Saccharomyces cerevisiae}
Probab=72.45 E-value=24 Score=27.46 Aligned_cols=88 Identities=13% Similarity=0.134 Sum_probs=56.5
Q ss_pred hHHHHHHHHHHhc----------ChhHHHHHHHhhcccCCHHHHHHHHHHHHHhccchhhH-HHH---HhcChHHHHHHH
Q psy4705 3 RRAATQTMTNMIV----------SEDVIKIYEANKDKVESDNTRELLARILNALASQQELR-GLM---VQQGASKALIHL 68 (164)
Q Consensus 3 ~~aa~~~l~nli~----------~~~vi~~l~v~l~k~~S~~~k~~~~~il~~Ls~~~~~R-~~i---vqqGai~~Ll~l 68 (164)
+.||..++-+++. -+.+++.+ ....++.++.+|+.+...|..+......- ..+ +...-++.|.++
T Consensus 121 ~~aa~~al~~i~~~~~~~~~~~~l~~ll~~l-~~~l~~k~~~vk~~al~~l~~~~~~~~~~~~~l~~~l~~~iip~l~~~ 199 (249)
T 2qk1_A 121 IEAIRKALLTICKYYDPLASSGRNEDMLKDI-LEHMKHKTPQIRMECTQLFNASMKEEKDGYSTLQRYLKDEVVPIVIQI 199 (249)
T ss_dssp HHHHHHHHHHHHHHSCTTCTTCTTHHHHHHH-HHHTTCSSHHHHHHHHHHHHHHHHHCCSCSHHHHHHHTTTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHccccccCCcHHHHHHHH-HHHHcCCChHHHHHHHHHHHHHHHHcCCcchhHHHHHHHHHHHHHHHH
Confidence 5666666666643 23666666 45567778999999999988888653311 111 113445566666
Q ss_pred hhccchhhhhHHHHHHHHHhCcC
Q psy4705 69 AHNGTVKGKRQAAQGLARLGITL 91 (164)
Q Consensus 69 ~~~gt~~~~~~A~~ALakLlIs~ 91 (164)
..+..+..|..|..+|..+.-..
T Consensus 200 l~D~~~~VR~aA~~~l~~i~~~v 222 (249)
T 2qk1_A 200 VNDTQPAIRTIGFESFAILIKIF 222 (249)
T ss_dssp HTCSSHHHHHHHHHHHHHHHHHH
T ss_pred hcCCCHHHHHHHHHHHHHHHHHh
Confidence 66666778888888888885333
No 75
>4ady_A RPN2, 26S proteasome regulatory subunit RPN2; protein binding, PC repeat; 2.70A {Saccharomyces cerevisiae} PDB: 4b4t_N
Probab=71.59 E-value=42 Score=32.21 Aligned_cols=15 Identities=20% Similarity=0.142 Sum_probs=7.2
Q ss_pred hhhHHHHHHHHHhCc
Q psy4705 76 GKRQAAQGLARLGIT 90 (164)
Q Consensus 76 ~~~~A~~ALakLlIs 90 (164)
.+..|.-+|+.|++.
T Consensus 594 VRraAViaLGlI~~g 608 (963)
T 4ady_A 594 VRRAAVIALGFVLLR 608 (963)
T ss_dssp HHHHHHHHHHHHTSS
T ss_pred HHHHHHHHHHhhccC
Confidence 344455555555444
No 76
>3tjz_B Coatomer subunit gamma; protein trafficking, golgi membrane, protein transport-prote binding complex; HET: GNP; 2.90A {Bos taurus}
Probab=69.26 E-value=17 Score=30.62 Aligned_cols=47 Identities=9% Similarity=-0.036 Sum_probs=26.9
Q ss_pred hhHHHHHHHHHHhcC---hhHHHHHHHhhcccCCHHHHHHHHHHHHHhccc
Q psy4705 2 LRRAATQTMTNMIVS---EDVIKIYEANKDKVESDNTRELLARILNALASQ 49 (164)
Q Consensus 2 ~~~aa~~~l~nli~~---~~vi~~l~v~l~k~~S~~~k~~~~~il~~Ls~~ 49 (164)
+|-.|..+||+.... +.+.+.+ -......++-+|..++-..+.|..+
T Consensus 120 iR~lALRtL~~I~~~~m~~~l~~~l-k~~L~d~~pyVRk~A~l~~~kL~~~ 169 (355)
T 3tjz_B 120 YRGPAVRALCQITDSTMLQAIERYM-KQAIVDKVPSVSSSALVSSLHLLKC 169 (355)
T ss_dssp HHHHHHHHHHHHCCTTTHHHHHHHH-HHHHTCSSHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHHH-HHHcCCCCHHHHHHHHHHHHHHhcc
Confidence 466677777777543 3333443 3444555666666666666665554
No 77
>3dad_A FH1/FH2 domain-containing protein 1; formin, FHOD1, GTPase-binding domain, ubiquitin-superfold, armadillo repeats, actin-binding, coiled coil; 2.30A {Homo sapiens}
Probab=61.11 E-value=32 Score=29.03 Aligned_cols=61 Identities=13% Similarity=0.078 Sum_probs=44.0
Q ss_pred cCCHHHHHHHHHHHHH-hccchhhHHHHHhcChHHHHHHHhhccchhhhhHHHHHHHHHhCc
Q psy4705 30 VESDNTRELLARILNA-LASQQELRGLMVQQGASKALIHLAHNGTVKGKRQAAQGLARLGIT 90 (164)
Q Consensus 30 ~~S~~~k~~~~~il~~-Ls~~~~~R~~ivqqGai~~Ll~l~~~gt~~~~~~A~~ALakLlIs 90 (164)
+++...+..+..-|-. ++.|++.-.+.+..+|+..|+.+..++.......+.+||..|..+
T Consensus 129 ~~~~~~lr~aLfsLk~~~q~D~~Fa~EFI~~~GL~~Li~vi~~~~gN~q~Y~L~AL~~LM~~ 190 (339)
T 3dad_A 129 SSSGPELRRSLFSLKQIFQEDKDLVPEFVHSEGLSCLIRVGAAADHNYQSYILRALGQLMLF 190 (339)
T ss_dssp HCCHHHHHHHHHHHHHHHHTCTTHHHHHHHTTHHHHHHHHHTTSCHHHHHHHHHHHHHHTTS
T ss_pred cCCcHHHHHHHHHHHHHhhcchHHHHHHHHhccHHHHHHHHHhcChHHHHHHHHHHHHHHhc
Confidence 3444444433344444 567999999999999999999988777666667778888887555
No 78
>4ady_A RPN2, 26S proteasome regulatory subunit RPN2; protein binding, PC repeat; 2.70A {Saccharomyces cerevisiae} PDB: 4b4t_N
Probab=61.02 E-value=24 Score=33.86 Aligned_cols=122 Identities=17% Similarity=0.145 Sum_probs=70.5
Q ss_pred hhHHHHHHHHHH-hcChhHHHHHHHhhcccCCHHHHHHHHHHHHHhccchhhHHHHHhcChHHHHHHHhhccchhhhhHH
Q psy4705 2 LRRAATQTMTNM-IVSEDVIKIYEANKDKVESDNTRELLARILNALASQQELRGLMVQQGASKALIHLAHNGTVKGKRQA 80 (164)
Q Consensus 2 ~~~aa~~~l~nl-i~~~~vi~~l~v~l~k~~S~~~k~~~~~il~~Ls~~~~~R~~ivqqGai~~Ll~l~~~gt~~~~~~A 80 (164)
.||+|+.++-.. +.+++.++.+.--+..++.+.+|..++-.+..++.-.. +.-++..|..++....+..+..|
T Consensus 594 VRraAViaLGlI~~g~~e~v~rlv~~L~~~~d~~VR~gAalALGli~aGn~------~~~aid~L~~L~~D~d~~Vrq~A 667 (963)
T 4ady_A 594 VRRAAVIALGFVLLRDYTTVPRIVQLLSKSHNAHVRCGTAFALGIACAGKG------LQSAIDVLDPLTKDPVDFVRQAA 667 (963)
T ss_dssp HHHHHHHHHHHHTSSSCSSHHHHTTTGGGCSCHHHHHHHHHHHHHHTSSSC------CHHHHHHHHHHHTCSSHHHHHHH
T ss_pred HHHHHHHHHHhhccCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhccCCC------cHHHHHHHHHHccCCCHHHHHHH
Confidence 466666666653 33344555542224556667777777766666543221 12234555566666667778889
Q ss_pred HHHHHHHhCcCCCCcccCCCCcccchHHHHhccC-CCcchHHHHHHHHHHHcc
Q psy4705 81 AQGLARLGITLNPEVAFPGERSLEVVRPLLSLLH-PEATALETFEGLMALCNL 132 (164)
Q Consensus 81 ~~ALakLlIs~nP~l~f~~~~~~~av~pL~~LL~-~~~~~l~~fEaLlALTNL 132 (164)
+.||+.+.+-+|...- + ++....+-|..... ...+..-+|=+.+|+.-+
T Consensus 668 i~ALG~Ig~gtnna~~-~--rva~~l~~L~~~~~dk~~d~~~~fga~iAqGll 717 (963)
T 4ady_A 668 MIALSMILIQQTEKLN-P--QVADINKNFLSVITNKHQEGLAKFGACVAQGIM 717 (963)
T ss_dssp HHHHHHHSTTCCTTTC-T--THHHHHHHHHHHHHCSSSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCccccc-h--HHHHHHHHHHHHHhcccccHHHHHHHHHHHHHH
Confidence 9999999988776532 1 11222333444443 123456678888887544
No 79
>2vgl_A Adaptor protein complex AP-2, alpha 2 subunit; cytoplasmic vesicle, alternative splicing, endocytosis, lipid-binding, golgi apparatus, adaptor, membrane, transport; HET: IHP; 2.59A {Rattus norvegicus} PDB: 2xa7_A 2jkr_A 2jkt_A
Probab=48.86 E-value=54 Score=29.08 Aligned_cols=55 Identities=11% Similarity=0.110 Sum_probs=34.1
Q ss_pred cCCHHHHHHHHHHHHHhccchhhHHHHHhcChHHHHHHHhhccchhhhhHHHHHHHHHhCc
Q psy4705 30 VESDNTRELLARILNALASQQELRGLMVQQGASKALIHLAHNGTVKGKRQAAQGLARLGIT 90 (164)
Q Consensus 30 ~~S~~~k~~~~~il~~Ls~~~~~R~~ivqqGai~~Ll~l~~~gt~~~~~~A~~ALakLlIs 90 (164)
.....+|..+..+++.++.++ +-..+++ -|++...+.....+..+.++++.++..
T Consensus 380 d~d~~Ir~~aL~lL~~l~~~~-Nv~~Iv~-----eL~~yl~~~d~~~~~~~v~~I~~la~k 434 (621)
T 2vgl_A 380 ERDVSVRQRAVDLLYAMCDRS-NAQQIVA-----EMLSYLETADYSIREEIVLKVAILAEK 434 (621)
T ss_dssp CCCHHHHHHHHHHHHHHCCHH-HHHHHHH-----HHHHHHHHCCHHHHHHHHHHHHHHHHH
T ss_pred CCCHhHHHHHHHHHHHHcChh-hHHHHHH-----HHHHHHHhcCHHHHHHHHHHHHHHHHh
Confidence 556777888888888888554 3333332 344444444455666677888887654
No 80
>2vgl_A Adaptor protein complex AP-2, alpha 2 subunit; cytoplasmic vesicle, alternative splicing, endocytosis, lipid-binding, golgi apparatus, adaptor, membrane, transport; HET: IHP; 2.59A {Rattus norvegicus} PDB: 2xa7_A 2jkr_A 2jkt_A
Probab=38.06 E-value=91 Score=27.59 Aligned_cols=97 Identities=14% Similarity=0.078 Sum_probs=64.4
Q ss_pred cccCCHHHHHHHHHHHHHhccchhhHHHHHhcChHHHHHHHh--hccchhhhhHHHHHHHHHhCcCCCCcccCCCCcccc
Q psy4705 28 DKVESDNTRELLARILNALASQQELRGLMVQQGASKALIHLA--HNGTVKGKRQAAQGLARLGITLNPEVAFPGERSLEV 105 (164)
Q Consensus 28 ~k~~S~~~k~~~~~il~~Ls~~~~~R~~ivqqGai~~Ll~l~--~~gt~~~~~~A~~ALakLlIs~nP~l~f~~~~~~~a 105 (164)
.++.++-.|..+.+.+.++...+ +++ --...+.... ....+-.|+.|+-++.++.- .+|.++-. .+.
T Consensus 120 l~~~n~~ir~lALr~L~~i~~~e-----~~~-~l~~~v~~~l~~~d~~~~VRK~A~~al~kl~~-~~p~~~~~----~~~ 188 (621)
T 2vgl_A 120 LASRNPTFMGLALHCIANVGSRE-----MAE-AFAGEIPKILVAGDTMDSVKQSAALCLLRLYR-TSPDLVPM----GDW 188 (621)
T ss_dssp HHSCCHHHHHHHHHHHHHHCCHH-----HHH-HHTTHHHHHHHCSSSCHHHHHHHHHHHHHHHH-HCGGGCCC----CSC
T ss_pred cCCCCHHHHHHHHHHhhccCCHH-----HHH-HHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHH-hChhhcCc----hhH
Confidence 34567888889989888886533 332 1233334444 45567788889999999965 67776521 246
Q ss_pred hHHHHhccCCCcchHHHHHHHHHHHcccCCC
Q psy4705 106 VRPLLSLLHPEATALETFEGLMALCNLAAIG 136 (164)
Q Consensus 106 v~pL~~LL~~~~~~l~~fEaLlALTNLAs~~ 136 (164)
++.|..+|. |.+..=+.-|+.+|..++..+
T Consensus 189 ~~~l~~lL~-d~d~~V~~~a~~~l~~i~~~~ 218 (621)
T 2vgl_A 189 TSRVVHLLN-DQHLGVVTAATSLITTLAQKN 218 (621)
T ss_dssp HHHHHHHTT-CSCHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHhC-CCCccHHHHHHHHHHHHHHhC
Confidence 778888887 555545667777887776543
No 81
>2iw3_A Elongation factor 3A; acetylation, ATP-binding, protein biosynthesis, nucleotide-binding, phosphorylation, RNA- binding, rRNA-binding; HET: ADP; 2.4A {Saccharomyces cerevisiae} PDB: 2iwh_A* 2ix3_A 2ix8_A
Probab=29.51 E-value=2.3e+02 Score=27.15 Aligned_cols=120 Identities=13% Similarity=0.106 Sum_probs=69.2
Q ss_pred hHHHHHHHHHHhcCh--------hHHHHHHHhhcccCCHHHHHHHHHHHHHhccchh----hHHHHHhcChHHHHHHHhh
Q psy4705 3 RRAATQTMTNMIVSE--------DVIKIYEANKDKVESDNTRELLARILNALASQQE----LRGLMVQQGASKALIHLAH 70 (164)
Q Consensus 3 ~~aa~~~l~nli~~~--------~vi~~l~v~l~k~~S~~~k~~~~~il~~Ls~~~~----~R~~ivqqGai~~Ll~l~~ 70 (164)
+++|+..+++++... +++..+. ...+...+. |.+...+..||+... .-.-++ +-++.++....
T Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~k~~~--~~a~~~~~~~~~~~~~~~~~e~~~~--~~~~~~~~~~~ 105 (986)
T 2iw3_A 31 RHEIASEVASFLNGNIIEHDVPEHFFGELA-KGIKDKKTA--ANAMQAVAHIANQSNLSPSVEPYIV--QLVPAICTNAG 105 (986)
T ss_dssp HHHHHHHHHHHHTSSCSSSSCCHHHHHHHH-HHHTSHHHH--HHHHHHHHHHTCTTTCCTTTHHHHH--TTHHHHHHHTT
T ss_pred HHHHHHHHHHHHhccccccccchhHHHHHH-HHHhccCCH--HHHHHHHHHHHHhcCCCCCcccchH--HHHHHHHHHhc
Confidence 467888888887643 5555552 222222222 777778888885542 222222 34555555444
Q ss_pred ccchhhhhHHHHHHHHHhCcCCCCcccCCCCcccchHHHHhccCCCcchHHHHHHHHHHHccc
Q psy4705 71 NGTVKGKRQAAQGLARLGITLNPEVAFPGERSLEVVRPLLSLLHPEATALETFEGLMALCNLA 133 (164)
Q Consensus 71 ~gt~~~~~~A~~ALakLlIs~nP~l~f~~~~~~~av~pL~~LL~~~~~~l~~fEaLlALTNLA 133 (164)
......|..|..|+.-|.-..||.-+ ...+|+|+.-|.....=.-+.-||-.+..|+
T Consensus 106 dk~~~v~~aa~~~~~~~~~~~~~~a~------~~~~~~~~~~~~~~~kw~~k~~~l~~~~~~~ 162 (986)
T 2iw3_A 106 NKDKEIQSVASETLISIVNAVNPVAI------KALLPHLTNAIVETNKWQEKIAILAAFSAMV 162 (986)
T ss_dssp CSSHHHHHHHHHHHHHHHHHSCGGGH------HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
T ss_pred CCchHHHHHHHHHHHHHHHhCCHHHH------HHHHHHHHHHhccccchHHHHHHHHHHHHHH
Confidence 43445566555566666666777543 2367888887753333445666777777776
No 82
>4atg_A TAF6; transcription, TFIID; HET: NHE; 1.89A {Antonospora locustae}
Probab=27.94 E-value=2e+02 Score=22.06 Aligned_cols=138 Identities=8% Similarity=0.036 Sum_probs=77.4
Q ss_pred hhHHHHHHHHHHhcChhHHHHHH----Hhhc-ccCCHHHHHHHHHHHHHhccchhhHHHHHhcChHHHHHH--Hhhccc-
Q psy4705 2 LRRAATQTMTNMIVSEDVIKIYE----ANKD-KVESDNTRELLARILNALASQQELRGLMVQQGASKALIH--LAHNGT- 73 (164)
Q Consensus 2 ~~~aa~~~l~nli~~~~vi~~l~----v~l~-k~~S~~~k~~~~~il~~Ls~~~~~R~~ivqqGai~~Ll~--l~~~gt- 73 (164)
.|++|-+.+.+.-.=...+|.|. ..+. .-.+-..-....++..+|..|+...-+.-=+==+++++. ++++-+
T Consensus 24 ~r~~aL~sL~~D~gL~~LlPyf~~fI~~~v~~nl~~l~~L~~lm~~~~ALl~N~~l~lepYlH~LipsvLtCll~k~l~~ 103 (196)
T 4atg_A 24 MKDIAIECLEKESGLQQLVPYFIQHISELILKSFKEAEVLKTCIALYFSLIKNKHVFIDPYLHQILPSLLTCVIGKSIVD 103 (196)
T ss_dssp THHHHHHHHHHCSSCTTTHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHCTTCCCGGGHHHHHHHHHHHHHCTTCCC
T ss_pred HHHHHHHHHhcCCChhhhHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHhcccCH
Confidence 46677777776644444444441 0110 111344455667788888888763222211112333443 223322
Q ss_pred hhhhhHHHHHHHHHhCcCCCCcccCCCCcccchHHHHh-ccCCCcchHHHHHHHHHHHcccCCChHHHHHHH
Q psy4705 74 VKGKRQAAQGLARLGITLNPEVAFPGERSLEVVRPLLS-LLHPEATALETFEGLMALCNLAAIGEKQRQRKK 144 (164)
Q Consensus 74 ~~~~~~A~~ALakLlIs~nP~l~f~~~~~~~av~pL~~-LL~~~~~~l~~fEaLlALTNLAs~~~~~r~~Iv 144 (164)
...|..|++-|+.|+-.-..+- ++- --..++-+.. +++|..+.-..|=|+.+|..|.. +-+|.-|+
T Consensus 104 ~~LRd~AA~lL~~I~~~~~~~y--~~L-~~RI~~tl~k~l~dp~~~l~t~YGAi~GL~~lG~--~~vr~~ll 170 (196)
T 4atg_A 104 DDVRKMSADIVKYIYDTYSRSY--KTL-APRVLKTLKGVWMDPNRSEDSQYGALYCLSILSK--NVVNTVIR 170 (196)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTS--TTH-HHHHHHHHHHHHTCTTSCHHHHHHHHHHHHHHCH--HHHHTHHH
T ss_pred HHHHHHHHHHHHHHHHHhCccC--chH-HHHHHHHHHHHHcCCCCChHHHHHHHHHHHHhHH--HHHHHhhh
Confidence 3688899999999976543221 100 0125556665 77778888999999999998853 45555553
No 83
>2fv2_A RCD1 required for cell differentiation1 homolog; armadillo-repeat, transcription; 2.20A {Homo sapiens}
Probab=26.46 E-value=1.4e+02 Score=24.43 Aligned_cols=59 Identities=15% Similarity=0.168 Sum_probs=45.4
Q ss_pred HHHHHHHHHHHHHhcc--chhhHHHHHhcChHHHHHHHhhccchhhhhHHHHHHHHHhCcC
Q psy4705 33 DNTRELLARILNALAS--QQELRGLMVQQGASKALIHLAHNGTVKGKRQAAQGLARLGITL 91 (164)
Q Consensus 33 ~~~k~~~~~il~~Ls~--~~~~R~~ivqqGai~~Ll~l~~~gt~~~~~~A~~ALakLlIs~ 91 (164)
+-.|=..--++.+|.. |++...-+.+..-++.++.....|++-.|..|...+.||+.+.
T Consensus 116 E~LRLtsLGVIgaLvK~dd~eVi~fLL~tEiiplCLrime~GselSKtvAtfIlqKIL~dd 176 (268)
T 2fv2_A 116 EYLRLTSLGVIGALVKTDEQEVINFLLTTEIIPLCLRIMESGSELSKTVATFILQKILLDD 176 (268)
T ss_dssp HHHHHHHHHHHHHHGGGCCHHHHHHHHHTTHHHHHHHHHHHSCHHHHHHHHHHHHHHHHSH
T ss_pred hhhhhhHHHHHHHHhccCcHHHHHHHHhhhHHHHHHHHHhhccHHHHHHHHHHHHHHhccc
Confidence 3445455567777774 4566777778888888888889999999999999999997543
No 84
>2jpq_A UPF0352 protein VP2129; dimer, all alpha, homodimer, structural genomics, PSI-2, protein structure initiative; NMR {Vibrio parahaemolyticus} SCOP: a.284.1.1
Probab=23.82 E-value=46 Score=22.52 Aligned_cols=26 Identities=27% Similarity=0.285 Sum_probs=19.3
Q ss_pred HHHHHHHcccC------CChHHHHHHHhccch
Q psy4705 124 EGLMALCNLAA------IGEKQRQRKKLNFRP 149 (164)
Q Consensus 124 EaLlALTNLAs------~~~~~r~~Iv~~~~~ 149 (164)
=+||+|+|.++ +++..|+.|.+....
T Consensus 32 LSLMvLGNmvTNlln~~V~~~qR~~iAe~Fa~ 63 (83)
T 2jpq_A 32 LTLMIAGNIATNVLNQRVAASQRKLIAEKFAQ 63 (83)
T ss_dssp HHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHH
Confidence 38999999874 556788888776543
No 85
>2juw_A UPF0352 protein SO_2176; homodimer, helix, dimer, all alpha, northeast structural GEN consortium, NESG, structural genomics; NMR {Shewanella oneidensis} SCOP: a.284.1.1 PDB: 2qti_A
Probab=23.27 E-value=48 Score=22.28 Aligned_cols=25 Identities=32% Similarity=0.340 Sum_probs=19.0
Q ss_pred HHHHHHHcccC------CChHHHHHHHhccc
Q psy4705 124 EGLMALCNLAA------IGEKQRQRKKLNFR 148 (164)
Q Consensus 124 EaLlALTNLAs------~~~~~r~~Iv~~~~ 148 (164)
=+||+|+|.++ +++..|+.|.+...
T Consensus 32 LSLMvLGN~vTnlln~~V~~~qR~~iAe~Fa 62 (80)
T 2juw_A 32 LSLMALGNCVTHLLERKVPSESRQAVAEQFA 62 (80)
T ss_dssp HHHHHHHHHHHHHHHHTSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhcCCHHHHHHHHHHHH
Confidence 38999999874 55678888877654
No 86
>2juz_A UPF0352 protein HI0840; homodimer, helix, structural genomics, PSI-2, protein structure initiative; NMR {Haemophilus influenzae} SCOP: a.284.1.1
Probab=20.42 E-value=47 Score=22.33 Aligned_cols=24 Identities=29% Similarity=0.400 Sum_probs=18.3
Q ss_pred HHHHHHcccC------CChHHHHHHHhccc
Q psy4705 125 GLMALCNLAA------IGEKQRQRKKLNFR 148 (164)
Q Consensus 125 aLlALTNLAs------~~~~~r~~Iv~~~~ 148 (164)
+||+|+|.++ +++..|+.|.+...
T Consensus 33 SLMvLGN~vTnlln~~V~~~qR~~iAe~Fa 62 (80)
T 2juz_A 33 SLIALGNMASNLLTTSVPQTQCEALAQAFS 62 (80)
T ss_dssp HHHHHHHHHHHHHTTSSCSTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhcCCHHHHHHHHHHHH
Confidence 8999999864 55678888877654
Done!