BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy4706
(163 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9H3U1|UN45A_HUMAN Protein unc-45 homolog A OS=Homo sapiens GN=UNC45A PE=1 SV=1
Length = 944
Score = 46.2 bits (108), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 58/114 (50%), Gaps = 6/114 (5%)
Query: 12 GRDAIIQLITRNVHYKAINWAERLIEI----RGLQRLMEVASELQEYKYESSMEITEDTH 67
GRD + L+ + V K++ + + +GL++++EV LQ+ E + +T ++
Sbjct: 311 GRDNALTLLIKAVPRKSLKDPNNSLTLWVIDQGLKKILEVGGSLQDPPGE--LAVTANSR 368
Query: 68 TLASLCLARIFENMYYDQARERYLESIMEFIKDKLLSPDIESKVRVTVAITCLL 121
AS+ L+++F+++ D RE + +IK + K+R ++CLL
Sbjct: 369 MSASILLSKLFDDLKCDAERENFHRLCENYIKSWFEGQGLAGKLRAIQTVSCLL 422
>sp|Q5RAP0|UN45A_PONAB Protein unc-45 homolog A OS=Pongo abelii GN=UNC45A PE=2 SV=1
Length = 929
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 58/114 (50%), Gaps = 6/114 (5%)
Query: 12 GRDAIIQLITRNVHYKAINWAERLIEI----RGLQRLMEVASELQEYKYESSMEITEDTH 67
GRD + L+ + V K++ + + +GL++++EV LQ+ E + +T ++
Sbjct: 296 GRDNALTLLIKAVPRKSLKDPNNSLTLWVIDQGLKKILEVGGSLQDPPGE--LAVTANSR 353
Query: 68 TLASLCLARIFENMYYDQARERYLESIMEFIKDKLLSPDIESKVRVTVAITCLL 121
AS+ L+++F+++ D RE + +IK + K+R ++CLL
Sbjct: 354 MSASILLSKLFDDLKCDAERENFHRLCENYIKSWFEGRGLAGKLRAIQTVSCLL 407
>sp|Q6DGE9|UN45B_DANRE Protein unc-45 homolog B OS=Danio rerio GN=unc45b PE=1 SV=2
Length = 934
Score = 43.9 bits (102), Expect = 5e-04, Method: Composition-based stats.
Identities = 26/114 (22%), Positives = 66/114 (57%), Gaps = 6/114 (5%)
Query: 12 GRDAIIQLITRNV---HYKAINWAERLIEI-RGLQRLMEVASELQEYKYESSMEITEDTH 67
GRD + L+T+NV + K+ + ++ L I GL+++++V ++ + + +TE+T
Sbjct: 299 GRDQALNLLTKNVPRQNKKSTDNSKCLFTIDHGLKKILKVCGQVPDLP--DQLPMTENTQ 356
Query: 68 TLASLCLARIFENMYYDQARERYLESIMEFIKDKLLSPDIESKVRVTVAITCLL 121
+AS+ L+++++++ D R+++ + ++IK K D++ + ++ +L
Sbjct: 357 LIASVLLSKLYDDLRCDPERDQFRDICDDYIKSKFDPNDMDKNIHAINTLSGIL 410
>sp|Q99KD5|UN45A_MOUSE Protein unc-45 homolog A OS=Mus musculus GN=Unc45a PE=1 SV=2
Length = 944
Score = 43.5 bits (101), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/114 (23%), Positives = 58/114 (50%), Gaps = 6/114 (5%)
Query: 12 GRDAIIQLITRNVHYKAINWAERLIEI----RGLQRLMEVASELQEYKYESSMEITEDTH 67
GRD + L+ + V K+ + + +GL++++EV LQ+ E + +T ++
Sbjct: 311 GRDNALTLLIKMVPRKSPKDPNNSLTLWVIDQGLKKILEVGGSLQDAAGE--LTVTANSR 368
Query: 68 TLASLCLARIFENMYYDQARERYLESIMEFIKDKLLSPDIESKVRVTVAITCLL 121
AS+ L+++F+++ D RE + +I++ + K+R ++CLL
Sbjct: 369 MSASILLSKLFDDLKCDAERENFHRLCENYIRNWFEGHGLAGKLRAIQTVSCLL 422
>sp|Q8CGY6|UN45B_MOUSE Protein unc-45 homolog B OS=Mus musculus GN=Unc45b PE=1 SV=1
Length = 931
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/114 (23%), Positives = 62/114 (54%), Gaps = 6/114 (5%)
Query: 12 GRDAIIQLITRNVHYK--AINWAERLIEI--RGLQRLMEVASELQEYKYESSMEITEDTH 67
GRD + L+ +NV K +I+ R I + GL+++++V ++ + S + +T++T
Sbjct: 295 GRDQALNLLNKNVPRKDLSIHDNSRTIYVVDNGLRKILKVVGQVPDLP--SCLPLTDNTR 352
Query: 68 TLASLCLARIFENMYYDQARERYLESIMEFIKDKLLSPDIESKVRVTVAITCLL 121
LAS+ + ++++++ D R+ + + E+I K D++ V ++ +L
Sbjct: 353 MLASILINKLYDDLRCDPERDHFRKICEEYITSKFDPQDMDKNVNAIQTVSGIL 406
>sp|Q8IWX7|UN45B_HUMAN Protein unc-45 homolog B OS=Homo sapiens GN=UNC45B PE=2 SV=1
Length = 931
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/114 (23%), Positives = 62/114 (54%), Gaps = 6/114 (5%)
Query: 12 GRDAIIQLITRNVHYK--AINWAERLIEI--RGLQRLMEVASELQEYKYESSMEITEDTH 67
GRD + L+ +NV K AI+ R I + GL+++++V ++ + S + +T++T
Sbjct: 295 GRDQALNLLNKNVPRKDLAIHDNSRTIYVVDNGLRKILKVVGQVPDLP--SCLPLTDNTR 352
Query: 68 TLASLCLARIFENMYYDQARERYLESIMEFIKDKLLSPDIESKVRVTVAITCLL 121
LAS+ + ++++++ D R+ + + E+I K D++ + ++ +L
Sbjct: 353 MLASILINKLYDDLRCDPERDHFRKICEEYITGKFDPQDMDKNLNAIQTVSGIL 406
>sp|Q32PZ3|UN45A_RAT Protein unc-45 homolog A OS=Rattus norvegicus GN=Unc45a PE=2 SV=1
Length = 944
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/114 (22%), Positives = 56/114 (49%), Gaps = 6/114 (5%)
Query: 12 GRDAIIQLITRNVHYKAINWAERLIEI----RGLQRLMEVASELQEYKYESSMEITEDTH 67
GRD + L+ + V K+ + + +GL++++EV + E E + +T ++
Sbjct: 311 GRDNALTLLIKMVPRKSPKDPNNSLTLWVIDQGLKKILEVGGSVPEAAGE--LTVTANSR 368
Query: 68 TLASLCLARIFENMYYDQARERYLESIMEFIKDKLLSPDIESKVRVTVAITCLL 121
AS+ L+++F+++ D RE + +I+ + K+R ++CLL
Sbjct: 369 MSASILLSKLFDDLKCDAERENFHRLCENYIRSWFEGQGLAGKLRAIQTVSCLL 422
>sp|B0TYL4|G6PI_FRAP2 Glucose-6-phosphate isomerase OS=Francisella philomiragia subsp.
philomiragia (strain ATCC 25017) GN=pgi PE=3 SV=1
Length = 540
Score = 33.1 bits (74), Expect = 0.73, Method: Composition-based stats.
Identities = 18/67 (26%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Query: 50 ELQEYKYESSMEITEDTHTLASLCLARIFENMYYDQARERYLESIMEFIKDKLLSPDIES 109
EL+E K S E D H + L L FEN+Y+D ++ ++I++ + + ++++
Sbjct: 10 ELREQKVSLSHEFATDNHRVEKLSLK--FENIYFDYSKNLVNDNILKTLLESASKSNLKN 67
Query: 110 KVRVTVA 116
K++ A
Sbjct: 68 KIQQMFA 74
>sp|Q1H0Q5|FTR_METFK Formylmethanofuran--tetrahydromethanopterin formyltransferase
OS=Methylobacillus flagellatus (strain KT / ATCC 51484 /
DSM 6875) GN=ffsA PE=3 SV=1
Length = 302
Score = 32.0 bits (71), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 19/33 (57%)
Query: 91 LESIMEFIKDKLLSPDIESKVRVTVAITCLLLA 123
+ES+ME + D L PDI +R +A C L A
Sbjct: 242 IESVMEIVIDGLTDPDIRVAMRAGIAAACELGA 274
>sp|Q66578|POLG_HPE1H Genome polyprotein OS=Human parechovirus 1 (strain Harris) PE=1 SV=1
Length = 2180
Score = 30.0 bits (66), Expect = 6.6, Method: Composition-based stats.
Identities = 22/69 (31%), Positives = 39/69 (56%), Gaps = 4/69 (5%)
Query: 9 LLSGRDAIIQLITRNVHYKAINWAERLIEIRGLQRLMEVASE-LQEYKYESSMEITEDTH 67
LL +D ++ + ++ KAI W ER E + +++ AS+ + E K +S M+ T+D +
Sbjct: 1068 LLKIKDMVLSVFKPSIESKAIQWLERNKE--HVCSILDYASDIIVESKDQSKMK-TQDFY 1124
Query: 68 TLASLCLAR 76
S CLA+
Sbjct: 1125 QRYSDCLAK 1133
>sp|Q68F64|UN45B_XENLA Protein unc-45 homolog B OS=Xenopus laevis GN=unc45b PE=2 SV=1
Length = 927
Score = 30.0 bits (66), Expect = 7.3, Method: Composition-based stats.
Identities = 22/114 (19%), Positives = 58/114 (50%), Gaps = 6/114 (5%)
Query: 12 GRDAIIQLITRNV---HYKAINWAERLIEIR-GLQRLMEVASELQEYKYESSMEITEDTH 67
GRD + L+ +N+ K + ++ L + GL+++++V ++ E + + +T +T
Sbjct: 292 GRDQALNLLNKNIPRYDLKNKDNSKTLFVVDVGLKKILKVLGQVPELP--NCLPLTPNTR 349
Query: 68 TLASLCLARIFENMYYDQARERYLESIMEFIKDKLLSPDIESKVRVTVAITCLL 121
AS+ + ++++++ D R+ + + E+I D+E + ++ +L
Sbjct: 350 LNASVLINKLYDDLRCDPERDDFRKICEEYITGSFDPKDMEKNLHAIQTVSGIL 403
>sp|Q10348|YDA6_SCHPO Putative endonuclease C1F12.06c OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAC1F12.06c PE=3 SV=1
Length = 252
Score = 30.0 bits (66), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 14/57 (24%), Positives = 31/57 (54%)
Query: 23 NVHYKAINWAERLIEIRGLQRLMEVASELQEYKYESSMEITEDTHTLASLCLARIFE 79
N+H K W ++ IE++G+ +L+ L E +Y ++I+ D + ++ I++
Sbjct: 5 NLHDKLTIWRQQQIELKGMLQLIPKFQSLNEIRYVVGLDISFDKSSPKAVSALVIYD 61
>sp|P38535|XYNX_CLOTM Exoglucanase XynX OS=Clostridium thermocellum GN=xynX PE=3 SV=1
Length = 1087
Score = 29.6 bits (65), Expect = 7.7, Method: Composition-based stats.
Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 7/78 (8%)
Query: 7 NRLLSGRDAIIQLITRNVHYKAI--NWAERLIEIRGLQRLMEVASELQEYKYESSMEITE 64
N LL+G+ + ++ ++V + I NWA+ +IE+ + ++E ++ Q YE S +T
Sbjct: 891 NLLLTGKPS--GVLKKSVTFNDIKDNWAKDVIEVLASRHIVEGMTDTQ---YEPSKTVTR 945
Query: 65 DTHTLASLCLARIFENMY 82
T L L I E Y
Sbjct: 946 AEFTAMILKLLNIKEEAY 963
>sp|D7REX8|UN45B_XENTR Protein unc-45 homolog B OS=Xenopus tropicalis GN=unc45b PE=1 SV=1
Length = 927
Score = 29.6 bits (65), Expect = 8.2, Method: Composition-based stats.
Identities = 25/129 (19%), Positives = 60/129 (46%), Gaps = 12/129 (9%)
Query: 12 GRDAIIQLITRNVHYKAI----NWAERLIEIRGLQRLMEVASELQEYKYESSMEITEDTH 67
GRD + L+ +N+ + N + GL+++++V ++ E + + +T +T
Sbjct: 292 GRDQALNLLNKNIPRYDLKNKDNSKSLFVVDAGLKKILKVLGQVPELP--NCLPLTPNTR 349
Query: 68 TLASLCLARIFENMYYDQARERYLESIMEFIKDKLLSPDIESKVRVTVAITCLLLA---- 123
AS+ + ++++++ D R+ + E+I D+E + ++ +L
Sbjct: 350 LNASVLVNKLYDDLRCDPERDNFRIICEEYITGSFDPKDMEKNLHAIQTVSGILQGPFDL 409
Query: 124 --SLVSLEG 130
L+SL+G
Sbjct: 410 GNKLLSLQG 418
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.136 0.380
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 52,921,104
Number of Sequences: 539616
Number of extensions: 1798251
Number of successful extensions: 5160
Number of sequences better than 100.0: 19
Number of HSP's better than 100.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 5149
Number of HSP's gapped (non-prelim): 19
length of query: 163
length of database: 191,569,459
effective HSP length: 108
effective length of query: 55
effective length of database: 133,290,931
effective search space: 7331001205
effective search space used: 7331001205
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 56 (26.2 bits)