Query psy471
Match_columns 211
No_of_seqs 141 out of 1486
Neff 6.6
Searched_HMMs 29240
Date Fri Aug 16 23:51:42 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy471.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/471hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4b9q_A Chaperone protein DNAK; 99.9 1.8E-25 6.1E-30 212.4 12.3 147 4-156 36-209 (605)
2 1yuw_A Heat shock cognate 71 k 99.9 6.5E-25 2.2E-29 206.5 11.8 135 15-155 54-213 (554)
3 2kho_A Heat shock protein 70; 99.9 1.3E-24 4.5E-29 206.4 12.3 134 16-156 54-209 (605)
4 3d2f_A Heat shock protein homo 99.9 7.5E-24 2.6E-28 203.7 13.6 103 49-156 111-218 (675)
5 3i33_A Heat shock-related 70 k 99.9 9E-24 3.1E-28 189.4 12.2 103 49-156 131-235 (404)
6 2v7y_A Chaperone protein DNAK; 99.9 1.4E-23 4.8E-28 195.2 11.7 129 16-155 53-181 (509)
7 4gni_A Putative heat shock pro 99.9 1.7E-23 5.7E-28 188.4 9.8 104 48-156 122-226 (409)
8 3qfu_A 78 kDa glucose-regulate 99.9 4.2E-23 1.4E-27 183.8 12.0 103 48-156 125-227 (394)
9 1dkg_D Molecular chaperone DNA 99.9 6.8E-22 2.3E-26 176.0 11.6 135 16-156 54-209 (383)
10 1jce_A ROD shape-determining p 99.7 3.2E-16 1.1E-20 137.6 11.7 91 62-156 76-168 (344)
11 2fsj_A Hypothetical protein TA 99.5 4.6E-14 1.6E-18 125.3 7.0 102 48-156 92-211 (346)
12 3h1q_A Ethanolamine utilizatio 99.3 1.9E-11 6.5E-16 103.4 10.0 86 62-154 73-158 (272)
13 1k8k_A ARP3, actin-like protei 99.1 6.7E-10 2.3E-14 100.0 11.1 73 81-153 107-181 (418)
14 2ych_A Competence protein PILM 99.0 3.4E-10 1.2E-14 100.1 6.5 83 70-154 108-210 (377)
15 2fxu_A Alpha-actin-1, actin, a 99.0 2E-09 6.8E-14 95.9 10.3 82 62-153 82-166 (375)
16 4a2a_A Cell division protein F 98.8 1.7E-08 5.8E-13 91.9 8.8 91 62-154 56-225 (419)
17 2zgy_A Plasmid segregation pro 98.6 9.5E-09 3.3E-13 89.5 0.5 71 82-154 96-183 (320)
18 3js6_A Uncharacterized PARM pr 98.5 1.4E-07 5E-12 83.9 6.9 72 82-153 114-202 (355)
19 1k8k_B ARP2, actin-like protei 98.3 1.1E-07 3.8E-12 85.3 1.6 65 82-153 105-170 (394)
20 3dwl_A Actin-related protein 3 97.8 0.00011 3.9E-09 66.8 10.7 71 82-152 124-196 (427)
21 3qb0_A Actin-related protein 4 97.7 0.00012 3.9E-09 68.2 8.4 82 62-153 95-180 (498)
22 4am6_A Actin-like protein ARP8 97.6 0.00026 8.8E-09 67.7 9.9 66 82-153 222-288 (655)
23 4apw_A ALP12; actin-like prote 97.4 0.00011 3.8E-09 64.3 5.1 70 82-154 106-191 (329)
24 4fo0_A Actin-related protein 8 97.2 0.0013 4.4E-08 61.3 9.3 64 82-152 199-263 (593)
25 4ehu_A Activator of 2-hydroxyi 97.1 9E-05 3.1E-09 62.6 0.6 81 51-155 33-113 (276)
26 1t6c_A Exopolyphosphatase; alp 96.4 0.006 2E-07 53.2 6.8 59 95-153 98-156 (315)
27 2d0o_A DIOL dehydratase-reacti 96.4 0.005 1.7E-07 57.9 6.4 58 94-155 367-427 (610)
28 1nbw_A Glycerol dehydratase re 96.2 0.0046 1.6E-07 58.3 5.0 57 95-155 370-429 (607)
29 3mdq_A Exopolyphosphatase; str 95.8 0.016 5.6E-07 50.3 6.5 58 95-153 90-149 (315)
30 3cer_A Possible exopolyphospha 95.0 0.057 1.9E-06 47.5 7.4 58 96-154 104-165 (343)
31 1u6z_A Exopolyphosphatase; alp 94.5 0.061 2.1E-06 49.8 6.5 91 62-153 62-155 (513)
32 3hi0_A Putative exopolyphospha 94.4 0.069 2.4E-06 49.4 6.8 57 95-153 101-158 (508)
33 3cj1_A Ectonucleoside triphosp 89.4 0.55 1.9E-05 42.9 6.1 92 62-153 87-208 (456)
34 3aap_A Ectonucleoside triphosp 86.2 0.7 2.4E-05 40.7 4.5 57 96-153 89-158 (353)
35 3zx3_A Ectonucleoside triphosp 86.2 1.3 4.4E-05 40.5 6.4 94 62-155 87-201 (452)
36 3r8e_A Hypothetical sugar kina 81.4 4.4 0.00015 34.4 7.5 87 62-152 60-161 (321)
37 2qm1_A Glucokinase; alpha-beta 80.4 5.1 0.00018 33.5 7.5 86 62-152 47-151 (326)
38 4gic_A HDH, histidinol dehydro 78.0 8.4 0.00029 34.9 8.4 86 62-153 146-249 (423)
39 3vgl_A Glucokinase; ROK family 76.2 8.4 0.00029 32.6 7.6 68 80-152 56-139 (321)
40 3cet_A Conserved archaeal prot 75.0 2.2 7.5E-05 37.5 3.6 36 114-153 110-145 (334)
41 1kae_A HDH, histidinol dehydro 73.4 8 0.00028 35.1 7.0 83 62-153 140-243 (434)
42 4db3_A Glcnac kinase, N-acetyl 70.3 6.2 0.00021 33.6 5.4 45 106-152 119-163 (327)
43 2ch5_A NAGK protein; transfera 67.3 24 0.00081 29.7 8.4 62 80-148 70-134 (347)
44 3bex_A Type III pantothenate k 66.7 16 0.00054 30.2 7.0 63 80-149 56-136 (249)
45 3vov_A Glucokinase, hexokinase 66.1 7.4 0.00025 32.7 4.9 46 105-152 96-141 (302)
46 2ap1_A Putative regulator prot 66.1 10 0.00035 31.9 5.9 44 107-152 120-163 (327)
47 2b5x_A YKUV protein, TRXY; thi 65.7 32 0.0011 24.1 8.8 82 58-144 40-121 (148)
48 2aa4_A Mannac kinase, putative 63.6 23 0.00079 29.0 7.5 44 106-152 95-138 (289)
49 2e2o_A Hexokinase; acetate and 62.7 39 0.0013 27.7 8.8 74 65-146 44-118 (299)
50 1msz_A DNA-binding protein smu 62.7 7.6 0.00026 27.4 3.6 30 83-112 33-62 (86)
51 4evm_A Thioredoxin family prot 62.7 34 0.0012 23.4 7.4 82 58-144 33-115 (138)
52 1z6r_A MLC protein; transcript 60.3 17 0.00058 31.6 6.3 45 106-152 185-229 (406)
53 1z05_A Transcriptional regulat 59.7 12 0.00041 33.0 5.3 45 106-152 207-251 (429)
54 3mcp_A Glucokinase; structural 57.8 23 0.0008 30.9 6.8 82 63-145 46-158 (366)
55 1woq_A Inorganic polyphosphate 57.8 38 0.0013 27.5 7.8 45 106-152 113-158 (267)
56 3u5r_E Uncharacterized protein 56.2 43 0.0015 26.2 7.7 84 57-144 69-154 (218)
57 2hoe_A N-acetylglucosamine kin 55.9 9.5 0.00033 33.1 3.9 67 79-152 147-229 (380)
58 2yhx_A Hexokinase B; transfera 55.8 22 0.00074 32.2 6.4 56 95-154 164-221 (457)
59 3epq_A Putative fructokinase; 50.8 26 0.00088 29.4 5.7 40 105-145 95-134 (302)
60 2h30_A Thioredoxin, peptide me 50.3 38 0.0013 24.4 6.1 83 58-144 49-132 (164)
61 2gup_A ROK family protein; sug 48.9 18 0.00061 29.7 4.4 44 105-152 92-135 (292)
62 2yhw_A Bifunctional UDP-N-acet 48.0 21 0.00072 30.1 4.8 44 107-152 131-174 (343)
63 2l5o_A Putative thioredoxin; s 47.4 72 0.0025 22.5 8.0 79 58-144 39-117 (153)
64 1sz2_A Glucokinase, glucose ki 47.1 74 0.0025 26.7 8.1 64 80-146 66-150 (332)
65 3lor_A Thiol-disulfide isomera 46.2 77 0.0026 22.5 8.0 83 58-144 41-131 (160)
66 3erw_A Sporulation thiol-disul 46.1 64 0.0022 22.3 6.6 81 58-144 45-125 (145)
67 3o8m_A Hexokinase; rnaseh-like 44.4 42 0.0014 30.7 6.4 58 94-155 185-244 (485)
68 2hyx_A Protein DIPZ; thioredox 41.9 1.1E+02 0.0038 26.4 8.5 83 58-144 93-175 (352)
69 3drn_A Peroxiredoxin, bacterio 41.1 1E+02 0.0034 22.4 8.5 81 58-144 41-121 (161)
70 3djc_A Type III pantothenate k 39.6 41 0.0014 28.1 5.2 62 80-147 57-137 (266)
71 3kcm_A Thioredoxin family prot 36.1 1.1E+02 0.0038 21.5 9.4 79 58-144 39-117 (154)
72 3ia1_A THIO-disulfide isomeras 36.0 1.1E+02 0.0039 21.5 6.7 77 58-144 41-120 (154)
73 2iel_A Hypothetical protein TT 36.0 73 0.0025 24.3 5.5 35 82-116 101-135 (138)
74 3eyt_A Uncharacterized protein 35.0 1.2E+02 0.0041 21.5 7.7 83 58-144 39-128 (158)
75 4htl_A Beta-glucoside kinase; 34.9 49 0.0017 27.3 5.0 39 106-145 96-134 (297)
76 2h3g_X Biosynthetic protein; p 34.3 46 0.0016 27.7 4.6 61 80-147 56-135 (268)
77 1srv_A Protein (groel (HSP60 c 33.9 93 0.0032 23.9 5.9 32 80-112 79-110 (145)
78 1hux_A Activator of (R)-2-hydr 32.3 36 0.0012 28.0 3.6 39 111-153 76-114 (270)
79 3gl3_A Putative thiol:disulfid 31.5 1.3E+02 0.0046 21.0 9.7 78 58-144 39-116 (152)
80 3f9m_A Glucokinase; hexokinase 31.5 29 0.00099 31.7 3.1 26 133-158 75-100 (470)
81 2f9s_A Thiol-disulfide oxidore 31.3 1.4E+02 0.0047 21.0 9.3 78 58-144 37-114 (151)
82 3fkf_A Thiol-disulfide oxidore 31.2 1.3E+02 0.0044 20.7 8.0 75 62-145 48-126 (148)
83 3mtq_A Putative phosphoenolpyr 30.1 1E+02 0.0035 23.7 5.7 25 67-91 34-58 (159)
84 3hm8_A Hexokinase-3; glucose, 29.8 1E+02 0.0035 27.9 6.4 58 94-155 160-220 (445)
85 3ixr_A Bacterioferritin comigr 28.8 1.8E+02 0.0061 21.6 7.1 65 59-129 64-128 (179)
86 2pfu_A Biopolymer transport EX 28.8 67 0.0023 21.8 4.1 39 81-119 57-95 (99)
87 3htv_A D-allose kinase, alloki 28.1 1.6E+02 0.0053 24.5 7.0 39 105-145 105-143 (310)
88 3f9m_A Glucokinase; hexokinase 28.0 1.2E+02 0.004 27.6 6.5 57 94-154 184-243 (470)
89 4a57_A Nucleoside-triphosphata 28.0 41 0.0014 31.7 3.5 19 134-152 246-264 (611)
90 3o8m_A Hexokinase; rnaseh-like 27.8 35 0.0012 31.3 2.9 25 133-157 78-102 (485)
91 1ji0_A ABC transporter; ATP bi 27.6 52 0.0018 26.5 3.7 34 88-121 136-169 (240)
92 2q2r_A Glucokinase 1, putative 27.5 20 0.00068 30.9 1.2 18 107-124 127-144 (373)
93 3ha9_A Uncharacterized thiored 27.3 1.7E+02 0.0059 20.9 7.8 82 58-146 48-143 (165)
94 3hm8_A Hexokinase-3; glucose, 26.8 41 0.0014 30.5 3.2 24 133-156 57-80 (445)
95 3uma_A Hypothetical peroxiredo 26.7 2.1E+02 0.007 21.8 7.1 65 59-129 69-137 (184)
96 3j20_M 30S ribosomal protein S 26.6 2.1E+02 0.0071 21.6 6.7 57 59-116 56-117 (137)
97 2ywi_A Hypothetical conserved 26.5 1.9E+02 0.0066 21.3 8.6 83 58-144 57-141 (196)
98 3lfh_A Manxa, phosphotransfera 26.3 2E+02 0.0069 21.4 7.2 39 67-105 16-55 (144)
99 4gp7_A Metallophosphoesterase; 26.1 2E+02 0.0068 21.2 6.8 41 85-125 77-117 (171)
100 3tif_A Uncharacterized ABC tra 26.0 43 0.0015 26.9 3.0 34 88-121 142-175 (235)
101 3gkn_A Bacterioferritin comigr 25.9 1.8E+02 0.0062 20.7 7.3 66 58-129 47-112 (163)
102 3hdc_A Thioredoxin family prot 25.6 1.4E+02 0.0047 21.4 5.5 76 57-144 51-126 (158)
103 1bdg_A Hexokinase; phosphotran 25.2 1.3E+02 0.0045 26.8 6.3 58 93-154 171-230 (451)
104 1xvw_A Hypothetical protein RV 25.2 1.8E+02 0.0061 20.6 6.1 80 59-144 49-132 (160)
105 3h78_A PQS biosynthetic enzyme 24.7 1.7E+02 0.0058 25.0 6.7 58 96-154 283-351 (359)
106 3gfo_A Cobalt import ATP-bindi 24.4 47 0.0016 27.6 3.0 35 87-121 139-173 (275)
107 2cvb_A Probable thiol-disulfid 24.3 2.1E+02 0.0073 21.0 7.5 82 58-144 44-127 (188)
108 2pcj_A ABC transporter, lipopr 24.3 43 0.0015 26.7 2.7 35 87-121 136-170 (224)
109 1bdg_A Hexokinase; phosphotran 24.3 49 0.0017 29.7 3.2 23 134-156 67-89 (451)
110 1zbs_A Hypothetical protein PG 24.3 2.1E+02 0.007 23.3 7.0 61 80-147 59-121 (291)
111 3hp4_A GDSL-esterase; psychrot 24.2 2E+02 0.0069 20.8 6.4 34 82-115 105-144 (185)
112 2o8r_A Polyphosphate kinase; s 24.0 2.1E+02 0.0072 27.4 7.7 60 50-115 510-569 (705)
113 3hcz_A Possible thiol-disulfid 23.8 1E+02 0.0035 21.4 4.4 74 62-144 46-122 (148)
114 1vpl_A ABC transporter, ATP-bi 23.6 50 0.0017 27.1 3.0 34 88-121 143-176 (256)
115 4fo5_A Thioredoxin-like protei 23.5 1.9E+02 0.0065 20.1 7.1 75 58-141 43-121 (143)
116 3nkl_A UDP-D-quinovosamine 4-d 23.5 96 0.0033 22.0 4.3 39 80-120 65-103 (141)
117 2vc6_A MOSA, dihydrodipicolina 22.7 1.6E+02 0.0053 24.5 6.0 40 81-121 96-138 (292)
118 1g6h_A High-affinity branched- 22.6 53 0.0018 26.7 2.9 34 88-121 150-183 (257)
119 2cbz_A Multidrug resistance-as 22.6 51 0.0017 26.5 2.8 34 88-121 124-157 (237)
120 2yz2_A Putative ABC transporte 22.5 54 0.0019 26.9 3.0 34 88-121 135-168 (266)
121 1sgw_A Putative ABC transporte 22.5 49 0.0017 26.4 2.6 34 88-121 130-163 (214)
122 2ixe_A Antigen peptide transpo 22.3 66 0.0022 26.5 3.5 35 87-121 152-186 (271)
123 2yxb_A Coenzyme B12-dependent 22.3 1.5E+02 0.0052 22.3 5.4 46 69-114 7-52 (161)
124 2olj_A Amino acid ABC transpor 22.1 56 0.0019 26.9 3.0 35 87-121 155-189 (263)
125 2yhx_A Hexokinase B; transfera 22.0 57 0.0019 29.4 3.2 26 133-158 59-84 (457)
126 1b0u_A Histidine permease; ABC 21.7 57 0.0019 26.7 2.9 35 87-121 149-183 (262)
127 3or5_A Thiol:disulfide interch 21.5 2.2E+02 0.0074 20.0 8.6 81 58-144 45-127 (165)
128 2pze_A Cystic fibrosis transme 21.4 80 0.0027 25.1 3.7 33 89-121 128-160 (229)
129 3osx_A 60 kDa chaperonin; alph 21.2 1.4E+02 0.0048 24.1 5.1 31 81-112 93-123 (201)
130 3tui_C Methionine import ATP-b 21.0 69 0.0024 28.0 3.5 37 86-122 158-194 (366)
131 2pjz_A Hypothetical protein ST 20.8 61 0.0021 26.7 2.9 35 88-122 125-159 (263)
132 3m6c_A 60 kDa chaperonin 1; ch 20.8 1.5E+02 0.005 23.9 5.0 31 81-112 86-116 (194)
133 2d2e_A SUFC protein; ABC-ATPas 20.7 61 0.0021 26.2 2.9 34 89-122 140-174 (250)
134 2nq2_C Hypothetical ABC transp 20.6 54 0.0018 26.8 2.5 34 88-121 125-158 (253)
135 2lrn_A Thiol:disulfide interch 20.5 2.3E+02 0.0078 19.9 8.7 77 59-144 41-120 (152)
136 3mfq_A TROA, high-affinity zin 20.2 1.2E+02 0.004 25.2 4.6 48 62-114 197-244 (282)
No 1
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D
Probab=99.92 E-value=1.8e-25 Score=212.36 Aligned_cols=147 Identities=41% Similarity=0.550 Sum_probs=122.4
Q ss_pred ccceehhhh------HHhhhcccCcccchhhHhhhhhcCCCC-----------Cccc----------ceecceeeccccC
Q psy471 4 LLTIVSLED------VKLRQNQPCQATDNNIGYLARSFEGPE-----------WDYG----------HVRLRKSFSPRCC 56 (211)
Q Consensus 4 ~~~~~s~~~------~~~a~~~~~~~p~n~~~~l~r~~~g~~-----------~~~~----------~~~~~k~~speel 56 (211)
+.|+++|.. ...|.++...+|.|.+..++|.++.+. +++. ....++.|+|++|
T Consensus 36 ~PS~V~~~~~~~~~vG~~A~~~~~~~p~~ti~~~KrllG~~~~d~~v~~~~~~~p~~~~~~~~g~~~~~~~~~~~~p~ei 115 (605)
T 4b9q_A 36 TPSIIAYTQDGCTLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEEVQRDVSIMPFKIIAADNGDAWVEVKGQKMAPPQI 115 (605)
T ss_dssp EECCEEECTTSCEEESHHHHHTTTTCGGGEECCGGGTTTCBTTSHHHHHHHTTCSSEEEECTTSBEEEEETTEEECHHHH
T ss_pred cceEEEEeCCCcEEecHHHHHHHHhCCCcEehhhHHhhCCCCCCHHHHHHhhcCCeEEEEcCCCceEEEECCEEECHHHH
Confidence 445666642 234666677788888877777664331 1211 2235789999999
Q ss_pred CCchHHHHHHHHHHHHHHHhhccccceeeEccCCCccHHHHHHHHHHHHHhCCceeEEeechhHHHHHcccccCCCCCce
Q psy471 57 HHSPRLFQLLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYGLDKNLKGERN 136 (211)
Q Consensus 57 ~~~~~~a~iL~~L~~~a~~~~g~~~~~vVItVPa~f~~~qR~al~~Aa~~aGl~~~~lv~EP~AAAl~y~~~~~~~~~~~ 136 (211)
++++|++|++.|..++|.++..+|||||++|++.||+++++||..||+++++||+||+|||++|++.+. ..+.+
T Consensus 116 -----~a~iL~~lk~~ae~~lg~~v~~~VITVPa~f~~~qr~a~~~Aa~~AGl~v~~li~EP~AAAlaygl~~~-~~~~~ 189 (605)
T 4b9q_A 116 -----SAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGRIAGLEVKRIINEPTAAALAYGLDKG-TGNRT 189 (605)
T ss_dssp -----HHHHHHHHHHHHHHHHTSCCCEEEEEECTTCCHHHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHTTSC-CSSEE
T ss_pred -----HHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHHHHHHcCCceEEEeCcHHHHHHHhhhhcc-CCCCE
Confidence 999999999999999999999999999999999999999999999999999999999999999998875 35789
Q ss_pred EEEeecCCCceEEEEEeccc
Q psy471 137 VKLPKMLEPLLVLTLRKKKK 156 (211)
Q Consensus 137 vLV~D~GggT~Dvsv~~~~~ 156 (211)
+|||||||||||+|++++.+
T Consensus 190 vlV~DlGGGT~Dvsi~~~~~ 209 (605)
T 4b9q_A 190 IAVYDLGGGAFDISIIEIDE 209 (605)
T ss_dssp EEEEEECSSCEEEEEEEEEE
T ss_pred EEEEECCCCeEEEEEEEEec
Confidence 99999999999999999865
No 2
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A*
Probab=99.92 E-value=6.5e-25 Score=206.50 Aligned_cols=135 Identities=49% Similarity=0.639 Sum_probs=114.2
Q ss_pred hhhcccCcccchhhHhhhhhcCCCCC------------cccce-------------ecceeeccccCCCchHHHHHHHHH
Q psy471 15 LRQNQPCQATDNNIGYLARSFEGPEW------------DYGHV-------------RLRKSFSPRCCHHSPRLFQLLTKM 69 (211)
Q Consensus 15 ~a~~~~~~~p~n~~~~l~r~~~g~~~------------~~~~~-------------~~~k~~speel~~~~~~a~iL~~L 69 (211)
.|.++...+|.|.+..++|.++ +.+ ++... ...+.|+|++| ++++|++|
T Consensus 54 ~A~~~~~~~p~~ti~~~KrllG-~~~~d~~v~~~~~~~p~~v~~~~g~~~~~v~~~~~~~~~sp~ei-----~a~~L~~l 127 (554)
T 1yuw_A 54 AAKNQVAMNPTNTVFDAKRLIG-RRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEV-----SSMVLTKM 127 (554)
T ss_dssp HHHTTTTTCGGGEECCGGGTTT-CCSSCSHHHHHHTTCSSEEEEETTEEEEEEEETTEEEEECHHHH-----HHHHHHHH
T ss_pred HHHHhhhhChhhehHhhHHhcC-CCCCcHHHHHHhhcCCeEEEecCCceEEEEEECCCceEEcHHHH-----HHHHHHHH
Confidence 3455556678888777777664 322 22221 12478999999 99999999
Q ss_pred HHHHHHhhccccceeeEccCCCccHHHHHHHHHHHHHhCCceeEEeechhHHHHHcccccCCCCCceEEEeecCCCceEE
Q psy471 70 KETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYGLDKNLKGERNVKLPKMLEPLLVL 149 (211)
Q Consensus 70 ~~~a~~~~g~~~~~vVItVPa~f~~~qR~al~~Aa~~aGl~~~~lv~EP~AAAl~y~~~~~~~~~~~vLV~D~GggT~Dv 149 (211)
+..|..++|.++..+|||||++|++.||+++++|+..||+++++|++||+|||++|++.+....+.++||||+||||||+
T Consensus 128 k~~ae~~lg~~v~~~VitVPa~f~~~qr~a~~~A~~~AGl~~~~li~EP~AAAlay~~~~~~~~~~~vlV~D~GgGT~Dv 207 (554)
T 1yuw_A 128 KEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKVGAERNVLIFDLGGGTFDV 207 (554)
T ss_dssp HHHHHHHHSSCCCEEEEEECTTCCHHHHHHHHHHHHTTTCEEEEEEEHHHHHHHHTTCSTTCSSCEEEEEEEECSSCEEE
T ss_pred HHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHHHHHHcCCCeEEEeCcHHHHHHHHHhhccCCCCcEEEEEEcCCCeEEE
Confidence 99999999999999999999999999999999999999999999999999999999987754457899999999999999
Q ss_pred EEEecc
Q psy471 150 TLRKKK 155 (211)
Q Consensus 150 sv~~~~ 155 (211)
||+++.
T Consensus 208 sv~~~~ 213 (554)
T 1yuw_A 208 SILTIA 213 (554)
T ss_dssp EEEEEE
T ss_pred EEEEEc
Confidence 999975
No 3
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli}
Probab=99.91 E-value=1.3e-24 Score=206.36 Aligned_cols=134 Identities=44% Similarity=0.632 Sum_probs=115.1
Q ss_pred hhcccCcccchhhHhhhhhcCCCCC------------cccce----------ecceeeccccCCCchHHHHHHHHHHHHH
Q psy471 16 RQNQPCQATDNNIGYLARSFEGPEW------------DYGHV----------RLRKSFSPRCCHHSPRLFQLLTKMKETA 73 (211)
Q Consensus 16 a~~~~~~~p~n~~~~l~r~~~g~~~------------~~~~~----------~~~k~~speel~~~~~~a~iL~~L~~~a 73 (211)
|.++...+|.|.+..++|.++ +.+ ++... ..++.|+|++| ++++|++|+..|
T Consensus 54 A~~~~~~~p~~t~~~~Kr~iG-~~~~d~~v~~~~~~~p~~~~~~~~g~~~i~~~g~~~~~~ei-----~a~~L~~l~~~a 127 (605)
T 2kho_A 54 AKRQAVTNPQNTLFAIKRLIG-RRFQDEEVQRDVSIMPFKIIAADNGDAWVEVKGQKMAPPQI-----SAEVLKKMKKTA 127 (605)
T ss_dssp HHTTTTTCGGGEEECGGGTTT-CBSSSTTHHHHHHHCSSCEEECTTSBEEEEETTEEECHHHH-----HHHHHHHHHHHH
T ss_pred HHHHhhhCCCCEeehhhHhhC-CCCCcHHHHHHhhcCCeEEEECCCCceEEEECCEEEcHHHH-----HHHHHHHHHHHH
Confidence 566667788888777777764 322 22211 14678999999 999999999999
Q ss_pred HHhhccccceeeEccCCCccHHHHHHHHHHHHHhCCceeEEeechhHHHHHcccccCCCCCceEEEeecCCCceEEEEEe
Q psy471 74 EAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYGLDKNLKGERNVKLPKMLEPLLVLTLRK 153 (211)
Q Consensus 74 ~~~~g~~~~~vVItVPa~f~~~qR~al~~Aa~~aGl~~~~lv~EP~AAAl~y~~~~~~~~~~~vLV~D~GggT~Dvsv~~ 153 (211)
+.+++.++..+|||||++|++.||+++++|+..||+++++|++||+|||++|++.+. ..+.++|||||||||||+||++
T Consensus 128 e~~l~~~v~~~VitVPa~f~d~qr~a~~~A~~~AGl~v~~li~EP~AAAlay~l~~~-~~~~~vlV~DlGGGT~Dvsi~~ 206 (605)
T 2kho_A 128 EDYLGEPVTEAVITVPAYFNDAQRQATKDAGRIAGLEVKRIINEPTAAALAYGLDKG-TGNRTIAVYDLGGGTFDISIIE 206 (605)
T ss_dssp HHHHCSCCCEEEEEECTTCCHHHHHHHHHHHHTTTCEEEEEEEHHHHHHHHTTTTSS-SSEEEEEEEEECSSCEEEEEEE
T ss_pred HHHhCCCCcEEEEEECCCCCHHHHHHHHHHHHHcCCceEEEecCHHHHHHHhhhccc-CCCCEEEEEECCCCeEEEEEEE
Confidence 999999999999999999999999999999999999999999999999999998764 2578999999999999999999
Q ss_pred ccc
Q psy471 154 KKK 156 (211)
Q Consensus 154 ~~~ 156 (211)
+..
T Consensus 207 ~~~ 209 (605)
T 2kho_A 207 IDE 209 (605)
T ss_dssp EEC
T ss_pred EEe
Confidence 863
No 4
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A*
Probab=99.90 E-value=7.5e-24 Score=203.72 Aligned_cols=103 Identities=31% Similarity=0.416 Sum_probs=95.9
Q ss_pred eeeccccCCCchHHHHHHHHHHHHHHHhhccccceeeEccCCCccHHHHHHHHHHHHHhCCceeEEeechhHHHHHcccc
Q psy471 49 KSFSPRCCHHSPRLFQLLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYGLD 128 (211)
Q Consensus 49 k~~speel~~~~~~a~iL~~L~~~a~~~~g~~~~~vVItVPa~f~~~qR~al~~Aa~~aGl~~~~lv~EP~AAAl~y~~~ 128 (211)
+.|+|++| ++++|++|+..|..++|.++..+|||||++|++.||+++++|+..||+++++|++||+|||++|++.
T Consensus 111 ~~~speei-----~a~~L~~lk~~ae~~lg~~v~~~VITVPa~f~~~qR~a~~~Aa~~AGl~~~~li~EP~AAAlaygl~ 185 (675)
T 3d2f_A 111 HVFSATQL-----AAMFIDKVKDTVKQDTKANITDVCIAVPPWYTEEQRYNIADAARIAGLNPVRIVNDVTAAGVSYGIF 185 (675)
T ss_dssp EEEEHHHH-----HHHHHHHHHHHHHHHHCSCCCEEEEEECTTCCHHHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHH
T ss_pred ceEcHHHH-----HHHHHHHHHHHHHHHhCCCcceEEEEECCCCCHHHHHHHHHHHHHcCCceEEEEcchHHHHHHHhhh
Confidence 67999999 9999999999999999999999999999999999999999999999999999999999999999986
Q ss_pred cCC-----CCCceEEEeecCCCceEEEEEeccc
Q psy471 129 KNL-----KGERNVKLPKMLEPLLVLTLRKKKK 156 (211)
Q Consensus 129 ~~~-----~~~~~vLV~D~GggT~Dvsv~~~~~ 156 (211)
+.. ..+.++|||||||||||+||+++.+
T Consensus 186 ~~~~~~~~~~~~~vlV~DlGGGT~Dvsv~~~~~ 218 (675)
T 3d2f_A 186 KTDLPEGEEKPRIVAFVDIGHSSYTCSIMAFKK 218 (675)
T ss_dssp CSCCCCSSSCCEEEEEEEECSSCEEEEEEEEET
T ss_pred ccccccccCCCcEEEEEEcCCCcEEEEEEEecC
Confidence 531 3578999999999999999999753
No 5
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ...
Probab=99.90 E-value=9e-24 Score=189.43 Aligned_cols=103 Identities=58% Similarity=0.787 Sum_probs=97.1
Q ss_pred eeeccccCCCchHHHHHHHHHHHHHHHhhccccceeeEccCCCccHHHHHHHHHHHHHhCCceeEEeechhHHHHHcccc
Q psy471 49 KSFSPRCCHHSPRLFQLLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYGLD 128 (211)
Q Consensus 49 k~~speel~~~~~~a~iL~~L~~~a~~~~g~~~~~vVItVPa~f~~~qR~al~~Aa~~aGl~~~~lv~EP~AAAl~y~~~ 128 (211)
+.|+|++| ++++|++|++.+..+++.++..+|||||++|++.||+++++|+..||++++++++||+|||++|++.
T Consensus 131 ~~~~~~ei-----~a~~L~~l~~~a~~~~~~~~~~~vitvPa~~~~~~r~~~~~a~~~AGl~~~~li~Ep~AAa~~~~~~ 205 (404)
T 3i33_A 131 KTFFPEEI-----SSMVLTKMKEIAEAYLGGKVHSAVITVPAYFNDSQRQATKDAGTITGLNVLRIINEPTAAAIAYGLD 205 (404)
T ss_dssp EEECHHHH-----HHHHHHHHHHHHHHHHSSCCCEEEEEECTTCCHHHHHHHHHHHHHHTCEEEEEEEHHHHHHHHTTTT
T ss_pred eEEcHHHH-----HHHHHHHHHHHHHHHhccCCCcEEEEECCCCCHHHHHHHHHHHHHcCCCeEEEeccHHHHHHHHHhh
Confidence 78999999 9999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred cCCC--CCceEEEeecCCCceEEEEEeccc
Q psy471 129 KNLK--GERNVKLPKMLEPLLVLTLRKKKK 156 (211)
Q Consensus 129 ~~~~--~~~~vLV~D~GggT~Dvsv~~~~~ 156 (211)
.... .+.++||||+||||+|++++++.+
T Consensus 206 ~~~~~~~~~~vlV~D~GgGT~dvsv~~~~~ 235 (404)
T 3i33_A 206 KKGCAGGEKNVLIFDLGGGTFDVSILTIED 235 (404)
T ss_dssp SSCSSSSCCEEEEEEECSSCEEEEEEEEET
T ss_pred cccccCCCceEEEEECCCCcEEEEEEEEeC
Confidence 7643 678999999999999999998764
No 6
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426}
Probab=99.90 E-value=1.4e-23 Score=195.23 Aligned_cols=129 Identities=44% Similarity=0.607 Sum_probs=111.2
Q ss_pred hhcccCcccchhhHhhhhhcCCCCCcccceecceeeccccCCCchHHHHHHHHHHHHHHHhhccccceeeEccCCCccHH
Q psy471 16 RQNQPCQATDNNIGYLARSFEGPEWDYGHVRLRKSFSPRCCHHSPRLFQLLTKMKETAEAYLGHSVRDAVITVPAYFNDA 95 (211)
Q Consensus 16 a~~~~~~~p~n~~~~l~r~~~g~~~~~~~~~~~k~~speel~~~~~~a~iL~~L~~~a~~~~g~~~~~vVItVPa~f~~~ 95 (211)
+.++...+| +.+..++|.+ |+.+. ....++.|+|++| ++++|++|+..|+.+++.++..+|||||++|++.
T Consensus 53 A~~~~~~~p-~~~~~~Kr~l-g~p~~--~~~~g~~~~~~ei-----~a~~L~~l~~~ae~~l~~~~~~~VitvPa~~~~~ 123 (509)
T 2v7y_A 53 AKRQAITNP-NTIISIKRHM-GTDYK--VEIEGKQYTPQEI-----SAIILQYLKSYAEDYLGEPVTRAVITVPAYFNDA 123 (509)
T ss_dssp HHTTTTTCS-SEEECGGGTT-TSCCC--EEETTEEECHHHH-----HHHHHHHHHHHHHHHHTSCCCEEEEEECTTCCHH
T ss_pred HHHhHHhCC-CcHHHHHHhc-CCCcE--EEECCEEEcHHHH-----HHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHH
Confidence 444445567 6666676666 54332 2235678999999 9999999999999999989999999999999999
Q ss_pred HHHHHHHHHHHhCCceeEEeechhHHHHHcccccCCCCCceEEEeecCCCceEEEEEecc
Q psy471 96 QRQATKDAGAIAGLNVMRIVNEPTAAALAYGLDKNLKGERNVKLPKMLEPLLVLTLRKKK 155 (211)
Q Consensus 96 qR~al~~Aa~~aGl~~~~lv~EP~AAAl~y~~~~~~~~~~~vLV~D~GggT~Dvsv~~~~ 155 (211)
||+++++|+..||++++++++||+|||++|++.+. .+.++||||+||||||+|++++.
T Consensus 124 qr~a~~~a~~~AGl~~~~li~Ep~AAAlay~~~~~--~~~~vlV~D~GgGT~Dvsv~~~~ 181 (509)
T 2v7y_A 124 QRQATKDAGRIAGLEVERIINEPTAAALAYGLDKE--EDQTILVYDLGGGTFDVSILELG 181 (509)
T ss_dssp HHHHHHHHHHHTTCEEEEEEEHHHHHHHHTTGGGS--CSEEEEEEEECSSCEEEEEEEEE
T ss_pred HHHHHHHHHHHcCCCeEEEecCHHHHHHHHhhccC--CCCEEEEEECCCCeEEEEEEEEc
Confidence 99999999999999999999999999999998765 67899999999999999999874
No 7
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var}
Probab=99.89 E-value=1.7e-23 Score=188.38 Aligned_cols=104 Identities=26% Similarity=0.388 Sum_probs=94.6
Q ss_pred ceeeccccCCCchHHHHHHHHHHHHHHHhhccccceeeEccCCCccHHHHHHHHHHHHHhCCceeEEeechhHHHHHccc
Q psy471 48 RKSFSPRCCHHSPRLFQLLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYGL 127 (211)
Q Consensus 48 ~k~~speel~~~~~~a~iL~~L~~~a~~~~g~~~~~vVItVPa~f~~~qR~al~~Aa~~aGl~~~~lv~EP~AAAl~y~~ 127 (211)
.+.++|++| ++++|++|++.|..+++.++..+|||||++|++.||+++++|+..||++++++++||+|||++|++
T Consensus 122 ~~~~~~~ev-----~~~~L~~l~~~a~~~~~~~~~~~vitvPa~~~~~~r~~~~~a~~~AGl~~~~li~Ep~AAa~~~~~ 196 (409)
T 4gni_A 122 PSTLTVSEI-----ATRYLRRLVGAASEYLGKKVTSAVITIPTNFTEKQKAALIAAAAAADLEVLQLISEPAAAVLAYDA 196 (409)
T ss_dssp CEEEEHHHH-----HHHHHHHHHHHHHHHHTSCCCEEEEEECTTCCHHHHHHHHHHHHHTTCEEEEEEEHHHHHHHHTTC
T ss_pred ceEEcHHHH-----HHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHHHHHHcCCCeEEEEcCHHHHHHHHhc
Confidence 468999999 999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred cc-CCCCCceEEEeecCCCceEEEEEeccc
Q psy471 128 DK-NLKGERNVKLPKMLEPLLVLTLRKKKK 156 (211)
Q Consensus 128 ~~-~~~~~~~vLV~D~GggT~Dvsv~~~~~ 156 (211)
.. ....+.++|||||||||||+|++++.+
T Consensus 197 ~~~~~~~~~~vlv~D~GgGT~dvsv~~~~~ 226 (409)
T 4gni_A 197 RPEATISDKIIVVADLGGSRSDVTVLASRS 226 (409)
T ss_dssp ------CCEEEEEEEECSSCEEEEEEEEET
T ss_pred ccccCCCCCEEEEEECCCCceEEEEEEEeC
Confidence 75 234788999999999999999998764
No 8
>3qfu_A 78 kDa glucose-regulated protein homolog; HSP70, KAR2, BIP, chaperone; HET: ADP; 1.80A {Saccharomyces cerevisiae} PDB: 3qfp_A 3qml_A 3ldo_A* 3ldl_A 3ldn_A* 3ldp_A*
Probab=99.89 E-value=4.2e-23 Score=183.76 Aligned_cols=103 Identities=55% Similarity=0.766 Sum_probs=96.4
Q ss_pred ceeeccccCCCchHHHHHHHHHHHHHHHhhccccceeeEccCCCccHHHHHHHHHHHHHhCCceeEEeechhHHHHHccc
Q psy471 48 RKSFSPRCCHHSPRLFQLLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYGL 127 (211)
Q Consensus 48 ~k~~speel~~~~~~a~iL~~L~~~a~~~~g~~~~~vVItVPa~f~~~qR~al~~Aa~~aGl~~~~lv~EP~AAAl~y~~ 127 (211)
.+.++|+++ ++++|++|++.++.+++.++..+|||||++|+..||+++++|+..||++++++++||+|||++|++
T Consensus 125 ~~~~~~~ei-----~a~~l~~l~~~a~~~~~~~~~~~vitvP~~~~~~~r~~~~~a~~~aGl~~~~li~Ep~Aaa~~~~~ 199 (394)
T 3qfu_A 125 KKVFTPEEI-----SGMILGKMKQIAEDYLGTKVTHAVVTVPAYFNDAQRQATKDAGTIAGLNVLRIVNEPTAAAIAYGL 199 (394)
T ss_dssp EEEECHHHH-----HHHHHHHHHHHHHHHHTSCCCEEEEEECTTCCHHHHHHHHHHHHHTTCEEEEEEEHHHHHHHHTTT
T ss_pred ceEEcHHHH-----HHHHHHHHHHHHHHhcCCCcceEEEEECCCCCHHHHHHHHHHHHHcCCceEEEecCHHHHHHHHhh
Confidence 368999999 999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred ccCCCCCceEEEeecCCCceEEEEEeccc
Q psy471 128 DKNLKGERNVKLPKMLEPLLVLTLRKKKK 156 (211)
Q Consensus 128 ~~~~~~~~~vLV~D~GggT~Dvsv~~~~~ 156 (211)
... ....++||||+||||||++++++.+
T Consensus 200 ~~~-~~~~~vlV~D~Gggt~dvsv~~~~~ 227 (394)
T 3qfu_A 200 DKS-DKEHQIIVYDLGGGTFDVSLLSIEN 227 (394)
T ss_dssp TSC-SSCEEEEEEEECSSCEEEEEEEEET
T ss_pred ccC-CCCceEEEEEcCCCceeEEEEEEeC
Confidence 764 4678999999999999999998754
No 9
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1
Probab=99.86 E-value=6.8e-22 Score=176.01 Aligned_cols=135 Identities=44% Similarity=0.591 Sum_probs=112.4
Q ss_pred hhcccCcccchhhHhhhhhcCCCC-----------Ccccc----------eecceeeccccCCCchHHHHHHHHHHHHHH
Q psy471 16 RQNQPCQATDNNIGYLARSFEGPE-----------WDYGH----------VRLRKSFSPRCCHHSPRLFQLLTKMKETAE 74 (211)
Q Consensus 16 a~~~~~~~p~n~~~~l~r~~~g~~-----------~~~~~----------~~~~k~~speel~~~~~~a~iL~~L~~~a~ 74 (211)
+.+....+|.+.+..++|.++.+. +++.. ...++.++|++| ++++|++|++.|+
T Consensus 54 A~~~~~~~~~~~~~~~k~~lg~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~~~~~~i-----~~~~L~~l~~~a~ 128 (383)
T 1dkg_D 54 AKRQAVTNPQNTLFAIKRLIGRRFQDEEVQRDVSIMPFKIIAADNGDAWVEVKGQKMAPPQI-----SAEVLKKMKKTAE 128 (383)
T ss_dssp HHTTSTTCGGGEEECGGGTTTCBSCSHHHHHHTTTCSSEEEECSSSBEEEEETTEEECHHHH-----HHHHHHHHHHHHH
T ss_pred HHHhhhhCccceeehhHHhhCCCCCcHHHHHHhhcCCeEEEEcCCCcEEEEECCEEEcHHHH-----HHHHHHHHHHHHH
Confidence 455566678887777777764221 22221 114568999999 9999999999999
Q ss_pred HhhccccceeeEccCCCccHHHHHHHHHHHHHhCCceeEEeechhHHHHHcccccCCCCCceEEEeecCCCceEEEEEec
Q psy471 75 AYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYGLDKNLKGERNVKLPKMLEPLLVLTLRKK 154 (211)
Q Consensus 75 ~~~g~~~~~vVItVPa~f~~~qR~al~~Aa~~aGl~~~~lv~EP~AAAl~y~~~~~~~~~~~vLV~D~GggT~Dvsv~~~ 154 (211)
.+++.++..+|||||++|++.||+++++|+..||++++++++||+|||++|++... ..+.++||||+||||||++++++
T Consensus 129 ~~~~~~~~~~vitvP~~~~~~~r~~~~~a~~~aGl~~~~li~Ep~Aaa~~~~~~~~-~~~~~~lVvD~Gggttdvsv~~~ 207 (383)
T 1dkg_D 129 DYLGEPVTEAVITVPAYFNDAQRQATKDAGRIAGLEVKRIINEPTAAALAYGLDKG-TGNRTIAVYDLGGGTFDISIIEI 207 (383)
T ss_dssp HHHSSCCCEEEECBCTTCCHHHHHHHHHHHHHTTCEESCCCBHHHHHHHHHTCCC--CCEEEEEEEEECSSCEEEEEEEE
T ss_pred HHhCCCCCeEEEEECCCCCHHHHHHHHHHHHHcCCceEEEeccHHHHHHHHHhccC-CCCcEEEEEEcCCCeEEEEEEEE
Confidence 99998889999999999999999999999999999999999999999999988653 35679999999999999999997
Q ss_pred cc
Q psy471 155 KK 156 (211)
Q Consensus 155 ~~ 156 (211)
..
T Consensus 208 ~~ 209 (383)
T 1dkg_D 208 DE 209 (383)
T ss_dssp EC
T ss_pred Ee
Confidence 63
No 10
>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A
Probab=99.67 E-value=3.2e-16 Score=137.61 Aligned_cols=91 Identities=23% Similarity=0.230 Sum_probs=76.3
Q ss_pred HHHHHHHHHHHHHH--hhccccceeeEccCCCccHHHHHHHHHHHHHhCCceeEEeechhHHHHHcccccCCCCCceEEE
Q psy471 62 LFQLLTKMKETAEA--YLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYGLDKNLKGERNVKL 139 (211)
Q Consensus 62 ~a~iL~~L~~~a~~--~~g~~~~~vVItVPa~f~~~qR~al~~Aa~~aGl~~~~lv~EP~AAAl~y~~~~~~~~~~~vLV 139 (211)
...+++++...+.. .++ ...+|||||++|+..||+++++|++.+|+++++++++|+|||++|++... .+.++||
T Consensus 76 ~~~i~~~~l~~~~~~~~~~--~~~~vitvP~~~~~~~r~~~~~a~~~aG~~~~~li~ep~Aaa~~~~~~~~--~~~~~lV 151 (344)
T 1jce_A 76 ALVMLRYFINKAKGGMNLF--KPRVVIGVPIGITDVERRAILDAGLEAGASKVFLIEEPMAAAIGSNLNVE--EPSGNMV 151 (344)
T ss_dssp HHHHHHHHHHHHHTSCCSC--CCEEEEEECTTCCHHHHHHHHHHHHHTTCSEEEEEEHHHHHHHHTTCCTT--SSSCEEE
T ss_pred HHHHHHHHHHHHhhccccC--CCeEEEEECCCCCHHHHHHHHHHHHHcCCCeEeccCCHHHHHHhcCCCCC--CCceEEE
Confidence 45555555555443 233 47899999999999999999999999999999999999999999987654 6788999
Q ss_pred eecCCCceEEEEEeccc
Q psy471 140 PKMLEPLLVLTLRKKKK 156 (211)
Q Consensus 140 ~D~GggT~Dvsv~~~~~ 156 (211)
||+||||||+++++...
T Consensus 152 vDiGggttdvsv~~~~~ 168 (344)
T 1jce_A 152 VDIGGGTTEVAVISLGS 168 (344)
T ss_dssp EEECSSCEEEEEEETTE
T ss_pred EEeCCCeEEEEEEEcCC
Confidence 99999999999998643
No 11
>2fsj_A Hypothetical protein TA0583; actin homologs, archaea, ATPase, MREB, PARM, structural PROT; 1.90A {Thermoplasma acidophilum} SCOP: c.55.1.12 c.55.1.12 PDB: 2fsk_A 2fsn_A*
Probab=99.47 E-value=4.6e-14 Score=125.26 Aligned_cols=102 Identities=14% Similarity=0.050 Sum_probs=77.1
Q ss_pred ceeeccccCCCchHHHHHHHHHHHHHHHhhccccceee--EccCCCccHHHHHHHHHHHHHh--------C------Cce
Q psy471 48 RKSFSPRCCHHSPRLFQLLTKMKETAEAYLGHSVRDAV--ITVPAYFNDAQRQATKDAGAIA--------G------LNV 111 (211)
Q Consensus 48 ~k~~speel~~~~~~a~iL~~L~~~a~~~~g~~~~~vV--ItVPa~f~~~qR~al~~Aa~~a--------G------l~~ 111 (211)
+..+++... .++++..|++.+....+.+ .++| |+||++|+..||+++++++..+ | +..
T Consensus 92 ~~~~~~~~~-----~~ll~~~l~~~~~~~~~~~-~~vvL~i~vP~~~~~~er~a~~~~~~~~~~~v~~~~G~~~~i~v~~ 165 (346)
T 2fsj_A 92 DGRLASKEA-----FPLIAAALWESGIHNDGSP-VDLVIGSGTPLGTFDLEVKAAKEALENKVLTVTGPEGEVRQFNITR 165 (346)
T ss_dssp TTCTTSTTT-----HHHHHHHHHHHCCCC---C-EEEEEEEEECGGGHHHHHHHHHHHHTTEEEEEECGGGCEEEEEEEE
T ss_pred CCcccChhH-----HHHHHHHHHHhhhccCCCc-eEEEEcccCCHHHHHHHHHHHHHHHcCCCcEEEeCCCceEEEEEEE
Confidence 445677777 8888888877652233333 5699 9999999999999999998765 4 356
Q ss_pred eEEeechhHHHHHcccccC-C-CCCceEEEeecCCCceEEEEEeccc
Q psy471 112 MRIVNEPTAAALAYGLDKN-L-KGERNVKLPKMLEPLLVLTLRKKKK 156 (211)
Q Consensus 112 ~~lv~EP~AAAl~y~~~~~-~-~~~~~vLV~D~GggT~Dvsv~~~~~ 156 (211)
+++++||+|||++| +... . ....+++|+|+||||||++|+++.+
T Consensus 166 v~li~Ep~AAa~~~-l~~~~~~~~~~~vlVvDIGgGTtDv~vi~~~~ 211 (346)
T 2fsj_A 166 LIMRPQGVGAALYL-LNQGIIEQQPGYGVVIDVGSRTTDVLTINLMD 211 (346)
T ss_dssp EEEEETTHHHHHHH-HHHTSSCCCSSEEEEEEECSSCEEEEEEETTT
T ss_pred EEEEccHHHHHHHh-hccccccccCCcEEEEECCCCcEEEEEEEecC
Confidence 88999999999998 3321 1 1347899999999999999999643
No 12
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid}
Probab=99.26 E-value=1.9e-11 Score=103.44 Aligned_cols=86 Identities=24% Similarity=0.310 Sum_probs=76.3
Q ss_pred HHHHHHHHHHHHHHhhccccceeeEccCCCccHHHHHHHHHHHHHhCCceeEEeechhHHHHHcccccCCCCCceEEEee
Q psy471 62 LFQLLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYGLDKNLKGERNVKLPK 141 (211)
Q Consensus 62 ~a~iL~~L~~~a~~~~g~~~~~vVItVPa~f~~~qR~al~~Aa~~aGl~~~~lv~EP~AAAl~y~~~~~~~~~~~vLV~D 141 (211)
+..+|++++..+....+.....+++++|++|+..+|++++.++..+|+++..++.+|.|++++|+.. ..+|+|
T Consensus 73 ~~~~l~~~~~~~~~~~~~~~~~~v~tvp~~~~~~~~~~~~~~~~~~g~~~~~i~~e~~A~a~~~~~~-------~~~viD 145 (272)
T 3h1q_A 73 AIQIVRELKAKVERLLGSELFQAATAIPPGTVGRNAEACGHVVAGAGLELVTLVDEPVAAARALGIN-------DGIVVD 145 (272)
T ss_dssp HHHHHHHHHHHHHHHSSSCCCEEEEECCSCC---CTTHHHHHHHHTTCEEEEEECHHHHHHHHHTCS-------SEEEEE
T ss_pred HHHHHHHHHHHHHHhcCCccCeEEEEcCCCCCHHHHHHHHHHHHHcCCeeeecccHHHHHHHHHcCC-------CEEEEE
Confidence 7889999999999888888889999999999999999999999999999999999999999998763 259999
Q ss_pred cCCCceEEEEEec
Q psy471 142 MLEPLLVLTLRKK 154 (211)
Q Consensus 142 ~GggT~Dvsv~~~ 154 (211)
+||||+++++++.
T Consensus 146 iGggst~~~~~~~ 158 (272)
T 3h1q_A 146 IGGGTTGIAVIEK 158 (272)
T ss_dssp ECSSCEEEEEEET
T ss_pred ECCCcEEEEEEEC
Confidence 9999999999863
No 13
>1k8k_A ARP3, actin-like protein 3, actin-2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 c.55.1.1 PDB: 1tyq_A* 1u2v_A* 2p9i_A* 2p9k_A* 2p9l_A 2p9n_A* 2p9p_A* 2p9s_A* 2p9u_A* 3dxk_A* 3dxm_A* 3rse_A
Probab=99.07 E-value=6.7e-10 Score=99.99 Aligned_cols=73 Identities=10% Similarity=-0.050 Sum_probs=60.6
Q ss_pred cceeeEccCCCccHHHHHHHHHHH-HHhCCceeEEeechhHHHHH-cccccCCCCCceEEEeecCCCceEEEEEe
Q psy471 81 VRDAVITVPAYFNDAQRQATKDAG-AIAGLNVMRIVNEPTAAALA-YGLDKNLKGERNVKLPKMLEPLLVLTLRK 153 (211)
Q Consensus 81 ~~~vVItVPa~f~~~qR~al~~Aa-~~aGl~~~~lv~EP~AAAl~-y~~~~~~~~~~~vLV~D~GggT~Dvsv~~ 153 (211)
...+|||+|++|+..+|+++.+++ ..+|++.+.++++|+|||++ |..........+.||+|+|+|||+++++.
T Consensus 107 ~~~vvit~p~~~~~~~r~~~~e~~fe~~g~~~~~l~~ep~aa~~a~~~~~~~~~~~~~glVvDiG~gtt~v~~v~ 181 (418)
T 1k8k_A 107 DHYFLLTEPPLNTPENREYTAEIMFESFNVPGLYIAVQAVLALAASWTSRQVGERTLTGTVIDSGDGVTHVIPVA 181 (418)
T ss_dssp GCCEEEEECTTCCHHHHHHHHHHHHHTSCCSEEEEEEHHHHHHHHGGGSTTCCSCCCCEEEEEESSSCEEEEEEE
T ss_pred CCcEEEEeCCCCCHHHHHHHHHHHHHhcCCCEEEEechHHHHhhhhhcccccCCCCCeEEEEEcCCCceEEEEeE
Confidence 357999999999999999999999 88999999999999999988 52211111222779999999999999985
No 14
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus}
Probab=99.01 E-value=3.4e-10 Score=100.13 Aligned_cols=83 Identities=16% Similarity=0.098 Sum_probs=67.2
Q ss_pred HHHHHHhhccccceeeEccCCCccHHH--------------------HHHHHHHHHHhCCceeEEeechhHHHHHccccc
Q psy471 70 KETAEAYLGHSVRDAVITVPAYFNDAQ--------------------RQATKDAGAIAGLNVMRIVNEPTAAALAYGLDK 129 (211)
Q Consensus 70 ~~~a~~~~g~~~~~vVItVPa~f~~~q--------------------R~al~~Aa~~aGl~~~~lv~EP~AAAl~y~~~~ 129 (211)
+..+.++++.++..++|.+|. .+.+ .+.+++|++.||+++.+++.+|+|||++|++..
T Consensus 108 ~~ea~~~~~~~~~~~vid~~~--~~~~~~~~~~~~~~v~~va~~~~~v~~~~~~~~~aGl~~~~i~~ep~Aaa~~~~~~~ 185 (377)
T 2ych_A 108 RWEAERYIPFPIDEVVLDFAP--LTPLSEVQEGEQVQVMVAAARQEAVAGVLEALRGAGLVPVVLDVKPFAGLYPLEARL 185 (377)
T ss_dssp HHHHGGGCSSCC-CEEEEEEE--SSCGGGSCTTSEEEEEEEEEEHHHHHHHHHHHHHTTCEEEEEEEHHHHTTGGGHHHH
T ss_pred HHHHhhcCCCChhHceEEEEE--eCCCCCCCCcceeEEEEEEecHHHHHHHHHHHHHCCCceEEEecchHHHHHHHHhhc
Confidence 346777888888999998873 3332 388999999999999999999999999997654
Q ss_pred CCCCCceEEEeecCCCceEEEEEec
Q psy471 130 NLKGERNVKLPKMLEPLLVLTLRKK 154 (211)
Q Consensus 130 ~~~~~~~vLV~D~GggT~Dvsv~~~ 154 (211)
.......++|+|+||||||+++++.
T Consensus 186 ~~~~~~~~~vvDiGggttdi~i~~~ 210 (377)
T 2ych_A 186 AEEPDRVFLVLDIGAESTSLVLLRG 210 (377)
T ss_dssp HTSTTCEEEEEEECSSCEEEEEEET
T ss_pred ccccCCeEEEEEECCCcEEEEEEEC
Confidence 3335678999999999999999874
No 15
>2fxu_A Alpha-actin-1, actin, alpha skeletal muscle; actin complexed to bistramide A, structural protein; HET: HIC ATP BID; 1.35A {Oryctolagus cuniculus} SCOP: c.55.1.1 c.55.1.1 PDB: 1h1v_A* 1kxp_A* 1lot_B* 1m8q_7* 1ma9_B* 1mvw_1* 1nwk_A* 1o18_1* 1o19_1* 1o1a_1* 1o1b_0* 1o1c_0* 1o1d_0* 1o1e_1* 1o1f_0* 1o1g_1* 1j6z_A* 1qz6_A* 1rdw_X* 1rfq_A* ...
Probab=98.98 E-value=2e-09 Score=95.86 Aligned_cols=82 Identities=9% Similarity=-0.056 Sum_probs=65.6
Q ss_pred HHHHHHHHHHHHHHhhccc--cceeeEccCCCccHHHHHHHHHH-HHHhCCceeEEeechhHHHHHcccccCCCCCceEE
Q psy471 62 LFQLLTKMKETAEAYLGHS--VRDAVITVPAYFNDAQRQATKDA-GAIAGLNVMRIVNEPTAAALAYGLDKNLKGERNVK 138 (211)
Q Consensus 62 ~a~iL~~L~~~a~~~~g~~--~~~vVItVPa~f~~~qR~al~~A-a~~aGl~~~~lv~EP~AAAl~y~~~~~~~~~~~vL 138 (211)
...+++++.. +.++.. ...++||+|++++..+|+++.++ ...+|++.+.++++|+|||++++. .+.|
T Consensus 82 ~e~i~~~~~~---~~L~~~~~~~~vvit~p~~~~~~~r~~~~e~~fe~~g~~~~~~~~e~~aaa~a~g~-------~~~l 151 (375)
T 2fxu_A 82 MEKIWHHTFY---NELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGR-------TTGI 151 (375)
T ss_dssp HHHHHHHHHH---TTSCCCGGGSCEEEEECTTCCHHHHHHHHHHHHHTTCCSEEEEEEHHHHHHHHTTC-------SSEE
T ss_pred HHHHHHHHHH---HhcCCCCcCCcEEEEeCCCCcHHHHHHHHHHHHHhcCcceEEEccchheeeeecCC-------CeEE
Confidence 4445555542 334433 24699999999999999988876 478899999999999999999985 3689
Q ss_pred EeecCCCceEEEEEe
Q psy471 139 LPKMLEPLLVLTLRK 153 (211)
Q Consensus 139 V~D~GggT~Dvsv~~ 153 (211)
|+|+|+|||+++.+.
T Consensus 152 VvDiG~gtt~v~~v~ 166 (375)
T 2fxu_A 152 VLDSGDGVTHNVPIY 166 (375)
T ss_dssp EEEECSSCEEEEEEE
T ss_pred EEEcCCCceEEeEeE
Confidence 999999999998874
No 16
>4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A*
Probab=98.77 E-value=1.7e-08 Score=91.89 Aligned_cols=91 Identities=13% Similarity=0.061 Sum_probs=75.1
Q ss_pred HHHHHHHHHHHHHHhhccccce-eeEccCCC------------ccH----------------------------------
Q psy471 62 LFQLLTKMKETAEAYLGHSVRD-AVITVPAY------------FND---------------------------------- 94 (211)
Q Consensus 62 ~a~iL~~L~~~a~~~~g~~~~~-vVItVPa~------------f~~---------------------------------- 94 (211)
++..++++++.|+..+|.++.+ +++++|.. ++.
T Consensus 56 ~~~~I~~av~~ae~~~g~~i~~~v~v~i~g~~~~i~s~~~~~~i~~~~~~i~~~di~~~i~~a~~~~~p~d~~~l~~~p~ 135 (419)
T 4a2a_A 56 FKESVNTLLKELEEQLQKSLRSDFVISFSSVSFEREDTVIERDFGEEKRSITLDILSEMQSEALEKLKENGKTPLHIFSK 135 (419)
T ss_dssp HHHHHHHHHHHHHHHHTSCCCSEEEEEECCTTCEEEEEEEEEECCSSCEECCHHHHHHHHHHHHHHHSCTTEEEEEEEEE
T ss_pred HHHHHHHHHHHHHHHcCCCcCceEEEEEcCCcCeEEEEEeEEEEeCCCCEECHHHHHHHHHHhhhhcCCCCCEEEEEEee
Confidence 6778888888888889999999 99999988 210
Q ss_pred --------------------------------HHHHHHHHHHHHhCCceeEEeechhHHHHHcccccCCCCCceEEEeec
Q psy471 95 --------------------------------AQRQATKDAGAIAGLNVMRIVNEPTAAALAYGLDKNLKGERNVKLPKM 142 (211)
Q Consensus 95 --------------------------------~qR~al~~Aa~~aGl~~~~lv~EP~AAAl~y~~~~~~~~~~~vLV~D~ 142 (211)
...+.+.+|+..||+++.+++.+|+|||++|..... ....++|+|+
T Consensus 136 ~f~vDg~~~i~~P~Gm~g~~l~~~v~~v~~~~~~v~n~~~~~~~AGL~v~~lv~ep~Aaa~a~l~~~~--~~~gv~vvDi 213 (419)
T 4a2a_A 136 RYLLDDERIVFNPLDMKASKIAIEYTSIVVPLKVYEMFYNFLQDTVKSPFQLKSSLVSTAEGVLTTPE--KDRGVVVVNL 213 (419)
T ss_dssp EEEETTTEEESCCTTCEESEEEEEEEEEEEEHHHHHHHHHHHHTTSCSCEEEEEHHHHHHHHHCCHHH--HHHCEEEEEE
T ss_pred EEEECCccCcCCCCCCcccEEEEEEEEEEEeHHHHHHHHHHHHHcCCcEEEEEEHHHHHHHHhhcccc--ccCCEEEEEE
Confidence 122468899999999999999999999998864432 4567999999
Q ss_pred CCCceEEEEEec
Q psy471 143 LEPLLVLTLRKK 154 (211)
Q Consensus 143 GggT~Dvsv~~~ 154 (211)
||||||++|++-
T Consensus 214 Gggttdisi~~~ 225 (419)
T 4a2a_A 214 GYNFTGLIAYKN 225 (419)
T ss_dssp CSSSEEEEEEET
T ss_pred CCCcEEEEEEEC
Confidence 999999999873
No 17
>2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A* 2zhc_A* 3iku_A 3iky_A
Probab=98.56 E-value=9.5e-09 Score=89.48 Aligned_cols=71 Identities=14% Similarity=0.137 Sum_probs=51.9
Q ss_pred ceeeEccCCC-ccHH--HH--HHHHHH------------HHHhCCceeEEeechhHHHHHcccccCCCCCceEEEeecCC
Q psy471 82 RDAVITVPAY-FNDA--QR--QATKDA------------GAIAGLNVMRIVNEPTAAALAYGLDKNLKGERNVKLPKMLE 144 (211)
Q Consensus 82 ~~vVItVPa~-f~~~--qR--~al~~A------------a~~aGl~~~~lv~EP~AAAl~y~~~~~~~~~~~vLV~D~Gg 144 (211)
..+|+++|.. |... || .++.+. ++.+++..+.++++|.||+++|.... .....++|+|+||
T Consensus 96 ~~lv~glP~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~v~~~~e~~aa~~~~~~~~--~~~~~~~vvDiGg 173 (320)
T 2zgy_A 96 VDIVCTLPLTEYYDRNNQPNTENIERKKANFRKKITLNGGDTFTIKDVKVMPESIPAGYEVLQEL--DELDSLLIIDLGG 173 (320)
T ss_dssp EEEEEEECHHHHBCTTSSBCHHHHHHHHHHTTSCEEETTBCCCEEEEEEEEESSHHHHHHHHHHS--CTTCEEEEEEECS
T ss_pred EEEEEcCCHHHHccCCCcccHHHHHHHHHhhcCcEecCCCcEEEEEEEEEecCcHHHHHhhhccc--cCCCCEEEEEcCC
Confidence 3699999987 6541 22 222221 23455678889999999999886432 2567999999999
Q ss_pred CceEEEEEec
Q psy471 145 PLLVLTLRKK 154 (211)
Q Consensus 145 gT~Dvsv~~~ 154 (211)
||+|+++++-
T Consensus 174 gttd~~v~~~ 183 (320)
T 2zgy_A 174 TTLDISQVMG 183 (320)
T ss_dssp SCEEEEEEEG
T ss_pred CeEEEEEEeC
Confidence 9999999973
No 18
>3js6_A Uncharacterized PARM protein; partition, segregation, filament, unknown function; 1.95A {Staphylococcus aureus}
Probab=98.51 E-value=1.4e-07 Score=83.90 Aligned_cols=72 Identities=10% Similarity=0.083 Sum_probs=58.9
Q ss_pred ceeeEccCCCccHHHH-HHHHHHHHHhCC------------ceeEEeechhHHHHHcccccCCC----CCceEEEeecCC
Q psy471 82 RDAVITVPAYFNDAQR-QATKDAGAIAGL------------NVMRIVNEPTAAALAYGLDKNLK----GERNVKLPKMLE 144 (211)
Q Consensus 82 ~~vVItVPa~f~~~qR-~al~~Aa~~aGl------------~~~~lv~EP~AAAl~y~~~~~~~----~~~~vLV~D~Gg 144 (211)
..+++++|..+...+| .++++++...+. ..+.++++|.||++++.+..... .+..+||+|+||
T Consensus 114 ~~lvvGLP~~~~~~~k~~~l~~~l~~~~~v~~~g~~~~i~I~~V~v~pE~~~a~~~~~~~~~~~~~~~~~~~~~vvDiGg 193 (355)
T 3js6_A 114 VVIATGMPSNEIGTDKQAKFEKLLNKSRLIEIDGIAKTINVKGVKIVAQPMGTLLDLNMENGKVFKAFTEGKYSVLDFGS 193 (355)
T ss_dssp EEEEEEECGGGTTSHHHHHHHHHHSSCEEEEETTEEEEEEEEEEEEEEHHHHHHHHTTEETTEECHHHHTCEEEEEEECS
T ss_pred EEEEEeCCHHHHhHHHHHHHHHHhCCCeEEEECCEEEEEEEEEEEEEeCcHHHHHHHHHccCccccccccCcEEEEEeCC
Confidence 4799999999988887 588888875543 46778999999999998765211 478899999999
Q ss_pred CceEEEEEe
Q psy471 145 PLLVLTLRK 153 (211)
Q Consensus 145 gT~Dvsv~~ 153 (211)
||||++++.
T Consensus 194 gTtd~~v~~ 202 (355)
T 3js6_A 194 GTTIIDTYQ 202 (355)
T ss_dssp SCEEEEEEE
T ss_pred CcEEEEEEc
Confidence 999999984
No 19
>1k8k_B ARP2, actin-like protein 2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 PDB: 1tyq_B* 1u2v_B* 2p9i_B* 2p9l_B 2p9n_B* 2p9p_B* 2p9s_B* 2p9u_B* 3dxk_B* 3dxm_B* 3rse_B 2p9k_B*
Probab=98.33 E-value=1.1e-07 Score=85.27 Aligned_cols=65 Identities=9% Similarity=0.006 Sum_probs=15.1
Q ss_pred ceeeEccCCCccHHHHHHHHHHH-HHhCCceeEEeechhHHHHHcccccCCCCCceEEEeecCCCceEEEEEe
Q psy471 82 RDAVITVPAYFNDAQRQATKDAG-AIAGLNVMRIVNEPTAAALAYGLDKNLKGERNVKLPKMLEPLLVLTLRK 153 (211)
Q Consensus 82 ~~vVItVPa~f~~~qR~al~~Aa-~~aGl~~~~lv~EP~AAAl~y~~~~~~~~~~~vLV~D~GggT~Dvsv~~ 153 (211)
..++||+|++++..+|+++.+++ ..+|++.+.++++|+|||++++. .+.||+|+|+|+|+++.+.
T Consensus 105 ~~vllt~p~~~~~~~r~~~~e~~fe~~~~~~~~~~~~~~~a~~a~g~-------~~~lVVDiG~g~T~v~pv~ 170 (394)
T 1k8k_B 105 CKILLTEPPMNPTKNREKIVEVMFETYQFSGVYVAIQAVLTLYAQGL-------LTGVVVDSGDGVTHICPVY 170 (394)
T ss_dssp --------------------------------------------------------CCEEEECSSCEEEECEE
T ss_pred CcEEEEECCCCCHHHHHHHHHHhhhccCCCeEEEEhhHHHHHHhCCC-------ceEEEEEcCCCceEeeeeE
Confidence 45999999999999999888865 77899999999999999999875 3569999999999998764
No 20
>3dwl_A Actin-related protein 3; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=97.81 E-value=0.00011 Score=66.76 Aligned_cols=71 Identities=10% Similarity=-0.034 Sum_probs=60.6
Q ss_pred ceeeEccCCCccHHHHHHHHHHH-HHhCCceeEEeechhHHHHHcccccCCCC-CceEEEeecCCCceEEEEE
Q psy471 82 RDAVITVPAYFNDAQRQATKDAG-AIAGLNVMRIVNEPTAAALAYGLDKNLKG-ERNVKLPKMLEPLLVLTLR 152 (211)
Q Consensus 82 ~~vVItVPa~f~~~qR~al~~Aa-~~aGl~~~~lv~EP~AAAl~y~~~~~~~~-~~~vLV~D~GggT~Dvsv~ 152 (211)
..++||.|+..+..+|+.+.+.+ ...|++.+.++.+|.+|+++.+....... ..+-||+|+|+|+|+++.+
T Consensus 124 ~pvlltep~~~~~~~re~~~ei~FE~~~~p~v~l~~~~vla~~a~G~~~~~~~~~~tglVVDiG~g~T~v~PV 196 (427)
T 3dwl_A 124 HYFLLTEPPLNPPENRENTAEIMFESFNCAGLYIAVQAVLALAASWTSSKVTDRSLTGTVVDSGDGVTHIIPV 196 (427)
T ss_dssp CEEEEEECTTCCHHHHHHHHHHHTTTTCCSEEEEEEHHHHHHHGGGGSTTTCSCCCCEEEEEESSSCEEEEEE
T ss_pred CcEEEEcCCCCCHHHHHHHHHHHHHhccCceeeecchHHHHHHhcCCcccccCCCceEEEEECCCCceEEEEE
Confidence 47999999999999999998887 78999999999999999998886432111 4578999999999999986
No 21
>3qb0_A Actin-related protein 4; actin fold, ATP binding, nucleus, structural protein; HET: ATP; 3.40A {Saccharomyces cerevisiae}
Probab=97.65 E-value=0.00012 Score=68.21 Aligned_cols=82 Identities=11% Similarity=0.028 Sum_probs=63.9
Q ss_pred HHHHHHHHHHHHHHhhccc--cc-eeeEccCCCccHHHHHHHHHHH-HHhCCceeEEeechhHHHHHcccccCCCCCceE
Q psy471 62 LFQLLTKMKETAEAYLGHS--VR-DAVITVPAYFNDAQRQATKDAG-AIAGLNVMRIVNEPTAAALAYGLDKNLKGERNV 137 (211)
Q Consensus 62 ~a~iL~~L~~~a~~~~g~~--~~-~vVItVPa~f~~~qR~al~~Aa-~~aGl~~~~lv~EP~AAAl~y~~~~~~~~~~~v 137 (211)
...+++++... .++.. -. .++||.|+..+...|+.+.+++ ...|++.+.++.+|.+||+++|.. +-
T Consensus 95 ~E~iw~~~f~~---~L~v~p~~~~pvlltep~~n~~~~Re~~~eilFE~f~vpav~l~~~~vlalya~G~~-------tg 164 (498)
T 3qb0_A 95 AQEQWQWALQN---ELYLNSNSGIPALLTEPVWNSTENRKKSLEVLLEGMQFEACYLAPTSTCVSFAAGRP-------NC 164 (498)
T ss_dssp HHHHHHHHHHH---TSCCSCCTTCCEEEEECTTCCHHHHHHHHHHHHTTSCCSEEEEEEHHHHHHHHHTCS-------SE
T ss_pred HHHHHHHHHHh---hhCCCcccCCceEEEeCCCCcHHHHHHHHHHHHhhcCCCeEeecchHHHHHHHcCCC-------eE
Confidence 45555555432 33322 23 6899999999999999888864 789999999999999999988752 34
Q ss_pred EEeecCCCceEEEEEe
Q psy471 138 KLPKMLEPLLVLTLRK 153 (211)
Q Consensus 138 LV~D~GggT~Dvsv~~ 153 (211)
||+|+|+|+|+++.+.
T Consensus 165 lVVDiG~g~T~vvPI~ 180 (498)
T 3qb0_A 165 LVVDIGHDTCSVSPIV 180 (498)
T ss_dssp EEEEECSSCEEEEEEE
T ss_pred EEEEcCCCcEEEEEEe
Confidence 9999999999999874
No 22
>4am6_A Actin-like protein ARP8; nuclear protein, chromatin remodelling complex, ATP-binding nuclear actin-related protein; 2.70A {Saccharomyces cerevisiae} PDB: 4am7_A*
Probab=97.59 E-value=0.00026 Score=67.72 Aligned_cols=66 Identities=11% Similarity=0.151 Sum_probs=58.1
Q ss_pred ceeeEccCCCccHHHHHHHHHHH-HHhCCceeEEeechhHHHHHcccccCCCCCceEEEeecCCCceEEEEEe
Q psy471 82 RDAVITVPAYFNDAQRQATKDAG-AIAGLNVMRIVNEPTAAALAYGLDKNLKGERNVKLPKMLEPLLVLTLRK 153 (211)
Q Consensus 82 ~~vVItVPa~f~~~qR~al~~Aa-~~aGl~~~~lv~EP~AAAl~y~~~~~~~~~~~vLV~D~GggT~Dvsv~~ 153 (211)
..++||.|+.++...|+.+.+++ ...|++.+.++.+|.+|++++|+ ..+-||+|+|+|+|+++.+.
T Consensus 222 ~pVLLTEPplnp~~~REkm~EIlFE~fgvpavyl~~qavlAlyasGl------~ttGLVVDiG~g~T~VvPV~ 288 (655)
T 4am6_A 222 YKVVLVIPDIFKKSHVETFIRVLLTELQFQAVAIIQESLATCYGAGI------STSTCVVNIGAAETRIACVD 288 (655)
T ss_dssp CEEEEEECTTCCHHHHHHHHHHHHHTSCCSEEEEEEHHHHHHHHSCC------SSCEEEEEECSSCEEEEEEE
T ss_pred CcEEEEeCCCCCHHHHHHHHHHHHhhcCCCeeeeccHHHHHHHhCCC------CCceEEEcCCCceEEEEEEe
Confidence 46999999999999999988887 57899999999999999998875 24579999999999999874
No 23
>4apw_A ALP12; actin-like protein; 19.70A {Clostridium tetani}
Probab=97.45 E-value=0.00011 Score=64.27 Aligned_cols=70 Identities=11% Similarity=0.057 Sum_probs=52.1
Q ss_pred ceeeEccCCCccH--HHHHHHHHHHHHh--------C------CceeEEeechhHHHHHcccccCCCCCceEEEeecCCC
Q psy471 82 RDAVITVPAYFND--AQRQATKDAGAIA--------G------LNVMRIVNEPTAAALAYGLDKNLKGERNVKLPKMLEP 145 (211)
Q Consensus 82 ~~vVItVPa~f~~--~qR~al~~Aa~~a--------G------l~~~~lv~EP~AAAl~y~~~~~~~~~~~vLV~D~Ggg 145 (211)
-.+++++|..+.. .+|+.+++..... | +..+.++++|.+|++.+. .......++|+|+|||
T Consensus 106 v~lv~gLP~~~~~~~~~k~~~~~~l~~~~~v~~~~~g~~~~i~I~~v~v~pe~~ga~~~~~---~~~~~~~v~vvDiGgg 182 (329)
T 4apw_A 106 VQLVLACPLSVLRNAKAKEEYRDYIKGNGEITVKVDDKEYSFEITDITIKAEGSGVLFLEQ---ENFKNKNVAVIDFGGL 182 (329)
T ss_dssp EEEEEEECGGGTTSSTTTTHHHHHHSSCEEECSSTTCCCEEEEEEEEEEEEHHHHHHHHSC---CCCTTCEEEEEEECSS
T ss_pred EEEEEcCCHHHhcchhHHHHHHHHhcCCceEEEEECCEEEEEEEeEEEEEeccHHHHhhcc---hhhccCCEEEEEeCCC
Confidence 4789999998764 3677777776521 2 234678899998887652 1225688999999999
Q ss_pred ceEEEEEec
Q psy471 146 LLVLTLRKK 154 (211)
Q Consensus 146 T~Dvsv~~~ 154 (211)
|||+++++.
T Consensus 183 Ttd~~v~~~ 191 (329)
T 4apw_A 183 NMGFSLYRN 191 (329)
T ss_dssp CEEEEEEET
T ss_pred cEEEEEEEC
Confidence 999999984
No 24
>4fo0_A Actin-related protein 8; chromatin remodeling, nucleosomes, NU gene regulation; HET: ATP; 2.60A {Homo sapiens}
Probab=97.19 E-value=0.0013 Score=61.34 Aligned_cols=64 Identities=11% Similarity=0.167 Sum_probs=55.2
Q ss_pred ceeeEccCCCccHHHHHHHHHH-HHHhCCceeEEeechhHHHHHcccccCCCCCceEEEeecCCCceEEEEE
Q psy471 82 RDAVITVPAYFNDAQRQATKDA-GAIAGLNVMRIVNEPTAAALAYGLDKNLKGERNVKLPKMLEPLLVLTLR 152 (211)
Q Consensus 82 ~~vVItVPa~f~~~qR~al~~A-a~~aGl~~~~lv~EP~AAAl~y~~~~~~~~~~~vLV~D~GggT~Dvsv~ 152 (211)
..++||.|..++...|+.+.+. ....|+..+.++.++.+|++++|.. +-||+|+|.+.|.|+-+
T Consensus 199 ~pvlltep~~~~~~~re~~~eilFE~f~~pa~~~~~~~vla~ya~G~~-------tglVVDiG~~~T~v~PV 263 (593)
T 4fo0_A 199 YRCILLIPDIYNKQHVKELVNMILMKMGFSGIVVHQESVCATYGSGLS-------STCIVDVGDQKTSVCCV 263 (593)
T ss_dssp CEEEEEECSSCCHHHHHHHHHHHHHTTCCSEEEEEEHHHHHHHHHTCS-------EEEEEEECSSCEEEEEE
T ss_pred CcEEEEeCCCCCHHHHHHHHHHHHHhcCCCeEEeechHHHHHHHCCCC-------ceEEEEeCCCceeeeee
Confidence 3599999999999998877766 4677999999999999999988754 56999999999998865
No 25
>4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A
Probab=97.11 E-value=9e-05 Score=62.57 Aligned_cols=81 Identities=6% Similarity=-0.112 Sum_probs=55.2
Q ss_pred eccccCCCchHHHHHHHHHHHHHHHhhccccceeeEccCCCccHHHHHHHHHHHHHhCCceeEEeechhHHHHHcccccC
Q psy471 51 FSPRCCHHSPRLFQLLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYGLDKN 130 (211)
Q Consensus 51 ~speel~~~~~~a~iL~~L~~~a~~~~g~~~~~vVItVPa~f~~~qR~al~~Aa~~aGl~~~~lv~EP~AAAl~y~~~~~ 130 (211)
..|.++ ++.+|++++..+..........++-..| ..++..+.+.|++|+|+++++.+...
T Consensus 33 g~~~e~-----a~~vl~~~~~~a~~~~~~~~~~a~t~~~---------------~~a~~~~~~~Vne~~aha~a~~~~~~ 92 (276)
T 4ehu_A 33 GTGTTG-----PSRVLEKLYGKTGLAREDIKKVVVTGYG---------------RMNYSDADKQISELSCHARGVNFIIP 92 (276)
T ss_dssp CTTSSH-----HHHHHHHHHHHHCCCGGGEEEEEEESTT---------------GGGCCSCSEECCHHHHHHHHHHHHST
T ss_pred CCCHHH-----HHHHHHHHHHHCCCcchhccccccCchH---------------HHHhhCCCcccchHHHHHHHHHHhCC
Confidence 466778 8889988887764332211111222222 23566788899999999988876544
Q ss_pred CCCCceEEEeecCCCceEEEEEecc
Q psy471 131 LKGERNVKLPKMLEPLLVLTLRKKK 155 (211)
Q Consensus 131 ~~~~~~vLV~D~GggT~Dvsv~~~~ 155 (211)
....|+|+|||+++++++..+
T Consensus 93 ----~~~~vl~lgG~~~~~~~~~~~ 113 (276)
T 4ehu_A 93 ----ETRTIIDIGGQDAKVLKLDNN 113 (276)
T ss_dssp ----TCCEEEEECSSCEEEEEECTT
T ss_pred ----CCCeEEEEcCCCceEEEEEec
Confidence 345789999999999988543
No 26
>1t6c_A Exopolyphosphatase; alpha/beta protein, actin-like fold, hydrolase; 1.53A {Aquifex aeolicus} SCOP: c.55.1.8 c.55.1.8 PDB: 1t6d_A 2j4r_A*
Probab=96.40 E-value=0.006 Score=53.23 Aligned_cols=59 Identities=17% Similarity=0.032 Sum_probs=38.6
Q ss_pred HHHHHHHHHHHHhCCceeEEeechhHHHHHcccccCCCCCceEEEeecCCCceEEEEEe
Q psy471 95 AQRQATKDAGAIAGLNVMRIVNEPTAAALAYGLDKNLKGERNVKLPKMLEPLLVLTLRK 153 (211)
Q Consensus 95 ~qR~al~~Aa~~aGl~~~~lv~EP~AAAl~y~~~~~~~~~~~vLV~D~GggT~Dvsv~~ 153 (211)
++..++..+-..+|+++--|=.+..|.....+.....+.....+|+|+|||||.+++.+
T Consensus 98 N~~~fl~~v~~~~G~~i~vIsg~eEA~l~~~gv~~~l~~~~~~lvvDIGGGStEl~~~~ 156 (315)
T 1t6c_A 98 NAEEFLERVKREVGLVVEVITPEQEGRYAYLAVAYSLKPEGEVCVVDQGGGSTEYVFGK 156 (315)
T ss_dssp THHHHHHHHHHHTCCCEEECCHHHHHHHHHHHHHHHTCCCSEEEEEEEETTEEEEEEEE
T ss_pred CHHHHHHHHHHHHCCCEEEcCHHHHHHHHHHHHHhhcccCCCEEEEEeCCCcEEEEEEe
Confidence 34455556666789987644445555444444433322346799999999999999985
No 27
>2d0o_A DIOL dehydratase-reactivating factor large subunit; chaperone; HET: ADP; 2.00A {Klebsiella oxytoca} SCOP: c.8.6.1 c.55.1.6 c.55.1.6 PDB: 2d0p_A
Probab=96.37 E-value=0.005 Score=57.95 Aligned_cols=58 Identities=12% Similarity=-0.017 Sum_probs=46.1
Q ss_pred HHHHHHHHHHHHHh-CC--ceeEEeechhHHHHHcccccCCCCCceEEEeecCCCceEEEEEecc
Q psy471 94 DAQRQATKDAGAIA-GL--NVMRIVNEPTAAALAYGLDKNLKGERNVKLPKMLEPLLVLTLRKKK 155 (211)
Q Consensus 94 ~~qR~al~~Aa~~a-Gl--~~~~lv~EP~AAAl~y~~~~~~~~~~~vLV~D~GggT~Dvsv~~~~ 155 (211)
..+-+-+..|.+.+ |+ .+-. -+|.||+++..-... ....++++||||||||+||+.-.
T Consensus 367 ~~~m~NI~~cVer~~gL~veV~g--~ep~AAglaaLTeDE--~eLGvaiIDmGGGTTd~sVf~~G 427 (610)
T 2d0o_A 367 RLQMAMIAREIEQKLNIDVQIGG--AEAEAAILGALTTPG--TTRPLAILDLGAGSTDASIINPK 427 (610)
T ss_dssp CCCHHHHHHHHHHHHCCEEEEEE--EHHHHHHHHHTTSTT--CCSSEEEEEECSSEEEEEEECTT
T ss_pred HHHHHHHHHHHHhccCCcceecc--ccHHHhhhhhcCCCC--CcCCeEEEEeCCCcceEEEEcCC
Confidence 45566778888888 99 6666 888888887655444 77889999999999999998643
No 28
>1nbw_A Glycerol dehydratase reactivase alpha subunit; molecular chaperone, actin-like ATPase domain, beta/BETA/alpha swiveling domain, hydrolase; 2.40A {Klebsiella pneumoniae} SCOP: c.8.6.1 c.55.1.6 c.55.1.6
Probab=96.17 E-value=0.0046 Score=58.27 Aligned_cols=57 Identities=9% Similarity=-0.134 Sum_probs=43.7
Q ss_pred HHHHHHHHHHHHh-CC--ceeEEeechhHHHHHcccccCCCCCceEEEeecCCCceEEEEEecc
Q psy471 95 AQRQATKDAGAIA-GL--NVMRIVNEPTAAALAYGLDKNLKGERNVKLPKMLEPLLVLTLRKKK 155 (211)
Q Consensus 95 ~qR~al~~Aa~~a-Gl--~~~~lv~EP~AAAl~y~~~~~~~~~~~vLV~D~GggT~Dvsv~~~~ 155 (211)
.+-+-+..|.+.+ |+ .+-. -+|.||+++..-... ....++++||||||||+||+.-.
T Consensus 370 ~~m~NI~~~Ver~~gL~veV~g--~ep~AA~laaLTedE--~elGvaiIDmGgGTTd~sVf~~g 429 (607)
T 1nbw_A 370 LQMQVIARELSARLQTEVVVGG--VEANMAIAGALTTPG--CAAPLAILDLGAGSTDAAIVNAE 429 (607)
T ss_dssp CCSCCHHHHHHHHHTSEEEECS--CHHHHHHHHHTTSTT--CCSSEEEEEECSSEEEEEEECSS
T ss_pred HHHHHHHHHHHhccCCcceecc--ccHHHhhhhhcCCCC--CcCCeEEEEeCCCcceEEEEcCC
Confidence 3445677777788 88 6665 788888877655444 77889999999999999998643
No 29
>3mdq_A Exopolyphosphatase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE; 1.50A {Cytophaga hutchinsonii}
Probab=95.77 E-value=0.016 Score=50.34 Aligned_cols=58 Identities=7% Similarity=0.132 Sum_probs=38.6
Q ss_pred HHHHHHHHHHHHhCCceeEEeechhHHHHHc-ccccCCC-CCceEEEeecCCCceEEEEEe
Q psy471 95 AQRQATKDAGAIAGLNVMRIVNEPTAAALAY-GLDKNLK-GERNVKLPKMLEPLLVLTLRK 153 (211)
Q Consensus 95 ~qR~al~~Aa~~aGl~~~~lv~EP~AAAl~y-~~~~~~~-~~~~vLV~D~GggT~Dvsv~~ 153 (211)
++..++..+-...|+++- +|+-..=|.+.| +.....+ .....||+|+|||+|.+++++
T Consensus 90 N~~~fl~~i~~~tG~~i~-vIsG~eEA~l~~~gv~~~~~~~~~~~lviDIGGGStEl~~~~ 149 (315)
T 3mdq_A 90 NKQVLIDRIKKEVNIDVE-VIDGAREAELIFRGVQQAVPMEDHISLAMDIGGGSVEFIIGN 149 (315)
T ss_dssp THHHHHHHHHHHHCCCEE-ECCHHHHHHHHHHHHHHHSCCTTCCEEEEEECSSCEEEEEEC
T ss_pred CHHHHHHHHHHHHCCCeE-EeCHHHHHHHHHHHHHhcCCCCCCCEEEEEeCCCceEEEEEE
Confidence 334466666677898765 666555454444 3333222 246799999999999999986
No 30
>3cer_A Possible exopolyphosphatase-like protein; NESG, BLR13, Q8G5J2, X-RAY, structure, structural genomics, PSI-2; 2.40A {Bifidobacterium longum NCC2705}
Probab=94.99 E-value=0.057 Score=47.54 Aligned_cols=58 Identities=10% Similarity=0.114 Sum_probs=39.4
Q ss_pred HHHHHHHHHHHhCCceeEEeechhHHHHHc-ccccCCC---CCceEEEeecCCCceEEEEEec
Q psy471 96 QRQATKDAGAIAGLNVMRIVNEPTAAALAY-GLDKNLK---GERNVKLPKMLEPLLVLTLRKK 154 (211)
Q Consensus 96 qR~al~~Aa~~aGl~~~~lv~EP~AAAl~y-~~~~~~~---~~~~vLV~D~GggT~Dvsv~~~ 154 (211)
+..++..+-...|+++- +|+-..=|.+.| +...... ....++|+|+|||||+++++.-
T Consensus 104 ~~~fl~~v~~~tGi~ie-VIsG~eEA~l~~~gv~~~~~~~~~~~~~lviDIGGGStel~~~~~ 165 (343)
T 3cer_A 104 REEFEDEIERILGVRPE-VIPGTEEADLSFLGATSVVNRDDLPAPYLVVDLGGGSTELVIGGD 165 (343)
T ss_dssp HHHHHHHHHHHHSSCCE-ECCHHHHHHHHHHHHHSSCCTTTCCSSEEEEEECSSCEEEEECCC
T ss_pred HHHHHHHHHHHHCCCEE-EeCHHHHHHHHHHHHHhhCccccccCCEEEEEeCCCceEEEEeec
Confidence 34466666677898755 777666666655 3322221 2356999999999999999853
No 31
>1u6z_A Exopolyphosphatase; alpha/beta protein, askha (acetate and sugar kinases, HSC70, superfamily; 1.90A {Escherichia coli} SCOP: a.211.1.5 c.55.1.8 c.55.1.8 PDB: 2flo_A*
Probab=94.46 E-value=0.061 Score=49.81 Aligned_cols=91 Identities=14% Similarity=0.076 Sum_probs=51.3
Q ss_pred HHHHHHHHHHHHHHhhccccceeeEccCC--CccHHHHHHHHHHHHHhCCceeEEeechhHHHHHc-ccccCCCCCceEE
Q psy471 62 LFQLLTKMKETAEAYLGHSVRDAVITVPA--YFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAY-GLDKNLKGERNVK 138 (211)
Q Consensus 62 ~a~iL~~L~~~a~~~~g~~~~~vVItVPa--~f~~~qR~al~~Aa~~aGl~~~~lv~EP~AAAl~y-~~~~~~~~~~~vL 138 (211)
....+..|+..+......++..+.+-.-+ .--.+...++..+-...|+++- +|+-..=|.+.| |...........|
T Consensus 62 i~r~~~~L~~f~~~~~~~~v~~v~~vATsA~R~A~N~~~fl~~i~~~tG~~i~-vIsG~eEA~l~~~gv~~~~~~~~~~l 140 (513)
T 1u6z_A 62 MTRGLNCLSLFAERLQGFSPASVCIVGTHTLRQALNATDFLKRAEKVIPYPIE-IISGNEEARLIFMGVEHTQPEKGRKL 140 (513)
T ss_dssp HHHHHHHHHHHHHHTTTCCGGGEEEEECHHHHHCTTHHHHHHHHTTTCSSCEE-ECCHHHHHHHHHHHHHHHSCCCSCEE
T ss_pred HHHHHHHHHHHHHHHHhCCCCEEEEEecHHHHcCcCHHHHHHHHHHHHCCCEE-EeCHHHHHHHHHHHHHhhccCCCCEE
Confidence 34455555555544434445433221111 0112333456666667798765 777666666555 3333322223699
Q ss_pred EeecCCCceEEEEEe
Q psy471 139 LPKMLEPLLVLTLRK 153 (211)
Q Consensus 139 V~D~GggT~Dvsv~~ 153 (211)
|+|+|||+|.+++.+
T Consensus 141 viDIGGGStEl~~~~ 155 (513)
T 1u6z_A 141 VIDIGGGSTELVIGE 155 (513)
T ss_dssp EEEECSSCEEEEEEE
T ss_pred EEEECCCcEEEEEEe
Confidence 999999999999874
No 32
>3hi0_A Putative exopolyphosphatase; 17739545, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 2.30A {Agrobacterium tumefaciens str}
Probab=94.44 E-value=0.069 Score=49.40 Aligned_cols=57 Identities=16% Similarity=0.082 Sum_probs=38.4
Q ss_pred HHHHHHHHHHHHhCCceeEEeechhHHHHHc-ccccCCCCCceEEEeecCCCceEEEEEe
Q psy471 95 AQRQATKDAGAIAGLNVMRIVNEPTAAALAY-GLDKNLKGERNVKLPKMLEPLLVLTLRK 153 (211)
Q Consensus 95 ~qR~al~~Aa~~aGl~~~~lv~EP~AAAl~y-~~~~~~~~~~~vLV~D~GggT~Dvsv~~ 153 (211)
+...++..+-...|+++- +|+-..=|.+.| |.....+. ...||+|+|||+|.+++.+
T Consensus 101 N~~~fl~~i~~~tG~~ie-vIsG~EEA~l~~~gv~~~~~~-~~~lvvDIGGGStEl~~~~ 158 (508)
T 3hi0_A 101 NGPDFIREAEAILGCEIE-VLSGEKEALYSAYGVISGFYQ-PDGIAGDLGGGSLELIDIK 158 (508)
T ss_dssp THHHHHHHHHHHHTSCEE-ECCHHHHHHHHHHHHHHHSSS-CEEEEEEECSSCEEEEEEE
T ss_pred CHHHHHHHHHHHHCCCeE-EecHHHHHHHHHHHHHhcCCC-CCeEEEEeCCCceEEEEee
Confidence 344566666677898765 777666555554 33332222 3459999999999999986
No 33
>3cj1_A Ectonucleoside triphosphate diphosphohydrolase 2; alpha/beta protein, actin-like fold, alternative splicing, calcium, glycoprotein, magnesium; 1.70A {Rattus norvegicus} PDB: 3cj7_A* 3cj9_A* 3cja_A*
Probab=89.44 E-value=0.55 Score=42.92 Aligned_cols=92 Identities=11% Similarity=0.016 Sum_probs=50.4
Q ss_pred HHHHHHHHHHHHHHhhc---cccceeeEccCCCccHH------HHHHHHH-HHHHh---CC--ceeEEeechhHHHHHc-
Q psy471 62 LFQLLTKMKETAEAYLG---HSVRDAVITVPAYFNDA------QRQATKD-AGAIA---GL--NVMRIVNEPTAAALAY- 125 (211)
Q Consensus 62 ~a~iL~~L~~~a~~~~g---~~~~~vVItVPa~f~~~------qR~al~~-Aa~~a---Gl--~~~~lv~EP~AAAl~y- 125 (211)
+...|..|++.|..... .....+.+-.-+..-.+ ++..+.+ +.... |+ ..+++|+-..=|.++|
T Consensus 87 ~~~~l~~Ll~~a~~~iP~~~~~~t~v~~~ATAgmR~a~~~~~~n~~~~L~~v~~~l~~~~f~~~~v~VIsG~eEa~y~wl 166 (456)
T 3cj1_A 87 AGQSLVRCLEQALRDVPRDRHASTPLYLGATAGMRLLNLTSPEATARVLEAVTQTLTQYPFDFRGARILSGQDEGVFGWV 166 (456)
T ss_dssp HHHHTHHHHHHHHHHSCHHHHTTCEEEEEECHHHHHHHHHCHHHHHHHHHHHHHHHTTSSSEEEEEEECCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCHHHcCCceEEEEeeHHHhhCccccHHHHHHHHHHHHHHHhhCCCCcCceEEcCchHHhhhhHH
Confidence 44566777777654421 12223333222222111 3334444 44444 44 4678999777766665
Q ss_pred ----ccccC----------CCCCceEEEeecCCCceEEEEEe
Q psy471 126 ----GLDKN----------LKGERNVKLPKMLEPLLVLTLRK 153 (211)
Q Consensus 126 ----~~~~~----------~~~~~~vLV~D~GggT~Dvsv~~ 153 (211)
.+... .+....++|+|||||++.++...
T Consensus 167 ~vn~~lg~~~~~~~~~~~~~~~~~t~gvlDlGGgStqi~~~~ 208 (456)
T 3cj1_A 167 TANYLLENFIKYGWVGRWIRPRKGTLGAMDLGGASTQITFET 208 (456)
T ss_dssp HHHHHTTTTSCCEETTEECSSCCCCCEEEEECSSEEEEEEEC
T ss_pred HHHhhhcccccccccccccccCCCceEEEEcCCCceEEEecc
Confidence 23211 01246789999999999999874
No 34
>3aap_A Ectonucleoside triphosphate diphosphohydrolase I; adenosine triphosphatase, ntpdase; 1.60A {Legionella pneumophila} PDB: 3aaq_A* 3aar_A*
Probab=86.24 E-value=0.7 Score=40.73 Aligned_cols=57 Identities=11% Similarity=0.062 Sum_probs=36.2
Q ss_pred HHHHHHHHHHHh-------CCceeEEeechhHHHHHc-----ccccCC-CCCceEEEeecCCCceEEEEEe
Q psy471 96 QRQATKDAGAIA-------GLNVMRIVNEPTAAALAY-----GLDKNL-KGERNVKLPKMLEPLLVLTLRK 153 (211)
Q Consensus 96 qR~al~~Aa~~a-------Gl~~~~lv~EP~AAAl~y-----~~~~~~-~~~~~vLV~D~GggT~Dvsv~~ 153 (211)
+...+..+.... |+ .+++|+-..=|.+.| .+.... ...++++|+|+|||++.+++..
T Consensus 89 ~~~~l~~v~~~~~~~~~~~g~-~v~VIsG~eEa~~~~~gv~~~l~~~~~~~~~t~~v~DiGGGStei~~~~ 158 (353)
T 3aap_A 89 QKKYYDELEYWFRQQSQWQLV-EAKTITGNDEALFDWLAVNYKLDTLKSVQNKSVGVMDMGGASVQIVFPM 158 (353)
T ss_dssp HHHHHHHHHHHHHTCSSEEEE-EEEECCHHHHHHHHHHHHHHHTTCSSSCCSSCEEEEEECSSEEEEEEEC
T ss_pred HHHHHHHHHHHHhhCCCCCCC-eEEECChHHHHHHHHHHHHHHhhhccccccccEEEEEeCCCceEEEEec
Confidence 444444444455 64 566888766666554 232211 1345799999999999999874
No 35
>3zx3_A Ectonucleoside triphosphate diphosphohydrolase 1; domain rotation, purinergic signaling; 1.70A {Rattus norvegicus} PDB: 3zx2_A* 3zx0_A*
Probab=86.17 E-value=1.3 Score=40.53 Aligned_cols=94 Identities=9% Similarity=0.015 Sum_probs=53.8
Q ss_pred HHHHHHHHHHHHHHhhc---cccceeeEccCCCccH------HHHHHHHHHH-HHh---CC--ceeEEeechhHHHHHc-
Q psy471 62 LFQLLTKMKETAEAYLG---HSVRDAVITVPAYFND------AQRQATKDAG-AIA---GL--NVMRIVNEPTAAALAY- 125 (211)
Q Consensus 62 ~a~iL~~L~~~a~~~~g---~~~~~vVItVPa~f~~------~qR~al~~Aa-~~a---Gl--~~~~lv~EP~AAAl~y- 125 (211)
++..|+.|.+.|..... .....+.+-..|..-. .++..+.+++ ... ++ ..+++|+-..=|.++|
T Consensus 87 ~~~~l~~Ll~~a~~~vp~~~~~~tpi~~~ATAgmR~l~~~~~~~~~~il~~v~~~l~~~~f~~~~v~iisG~eEg~y~wi 166 (452)
T 3zx3_A 87 IAAYLAECMKMSTERIPASKQHQTPVYLGATAGMRLLRMESKQSADEVLAAVSRSLKSYPFDFQGAKIITGQEEGAYGWI 166 (452)
T ss_dssp HHHHHHHHHHHHHHHSCHHHHTTCEEEEEECHHHHHHHHHCHHHHHHHHHHHHHHHHTSSSEEEEEEECCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCHHHcCCccEEEEeeHHHhhccccCHHHHHHHHHHHHHHHhhCCCCCCceEECCchhhhhhhHH
Confidence 45678888888776533 1233444444443321 1334444443 333 44 3578898776666554
Q ss_pred ----ccccCCC-CCceEEEeecCCCceEEEEEecc
Q psy471 126 ----GLDKNLK-GERNVKLPKMLEPLLVLTLRKKK 155 (211)
Q Consensus 126 ----~~~~~~~-~~~~vLV~D~GggT~Dvsv~~~~ 155 (211)
.+..-.. ...++.++|||||++.++...-.
T Consensus 167 ~vnyllg~l~~~~~~t~g~lDlGGgStQi~f~~~~ 201 (452)
T 3zx3_A 167 TINYLLGRFKTPGGSTFGALDLGGASTQITFVPLN 201 (452)
T ss_dssp HHHHHTTTTC---CCCCEEEEECSSEEEEEECCSS
T ss_pred HHHhhhccccCCCCCceEEEecCCCceEEEeccCC
Confidence 3332111 34678899999999999977533
No 36
>3r8e_A Hypothetical sugar kinase; ribonuclease H-like motif, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.65A {Cytophaga hutchinsonii}
Probab=81.44 E-value=4.4 Score=34.35 Aligned_cols=87 Identities=11% Similarity=-0.029 Sum_probs=49.3
Q ss_pred HHHHHHHHHHHHHHhhccccceeeEccCCCccHHH-------------HHHHH-HHHHHh-CCceeEEeechhHHHHHcc
Q psy471 62 LFQLLTKMKETAEAYLGHSVRDAVITVPAYFNDAQ-------------RQATK-DAGAIA-GLNVMRIVNEPTAAALAYG 126 (211)
Q Consensus 62 ~a~iL~~L~~~a~~~~g~~~~~vVItVPa~f~~~q-------------R~al~-~Aa~~a-Gl~~~~lv~EP~AAAl~y~ 126 (211)
+..+.+.+.+... ...++..+.|++|...+... ...++ ...+.. |++ +.+.|+..|||++-.
T Consensus 60 ~~~i~~~i~~~~~--~~~~i~gigi~~pG~vd~~~g~v~~~~~l~~w~~~~l~~~l~~~~~~~p-V~v~NDa~aaalaE~ 136 (321)
T 3r8e_A 60 VESMKLEIGNFLK--QYPIVKGVGIGWPGLVSLDRTKVILLPNIPSVVNVPIVEILRSEFPHIH-FKIENDAKCAALGEY 136 (321)
T ss_dssp HHHHHHHHHHHHH--HCTTCCEEEEEESSEECTTSCCEEEBTTBCCCCSCCHHHHHHHHCTTSE-EEEEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh--ccCCeeEEEEEecccEECCCCEEEeCCCCccccCCCHHHHHHHHcCCCC-EEEEchHHHHHHHHH
Confidence 5555444444332 23456667777776543110 01111 122345 765 559999999999865
Q ss_pred cccCCCCCceEEEeecCCCceEEEEE
Q psy471 127 LDKNLKGERNVKLPKMLEPLLVLTLR 152 (211)
Q Consensus 127 ~~~~~~~~~~vLV~D~GggT~Dvsv~ 152 (211)
+.......++++++-+|.| .-.+++
T Consensus 137 ~~g~~~~~~~~v~l~~GtG-iG~gii 161 (321)
T 3r8e_A 137 YFGENKRMQTFILLALGTG-VGSGVM 161 (321)
T ss_dssp HHSTTTTCSSEEEEEESSS-EEEEEE
T ss_pred HhCCCCCCCcEEEEEECCc-eEEEEE
Confidence 5433345677888888887 455554
No 37
>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis}
Probab=80.40 E-value=5.1 Score=33.54 Aligned_cols=86 Identities=9% Similarity=0.114 Sum_probs=50.5
Q ss_pred HHHHHHHHHHHHHHhh--ccccceeeEccCCCccH-----------------HHHHHHHHHHHHhCCceeEEeechhHHH
Q psy471 62 LFQLLTKMKETAEAYL--GHSVRDAVITVPAYFND-----------------AQRQATKDAGAIAGLNVMRIVNEPTAAA 122 (211)
Q Consensus 62 ~a~iL~~L~~~a~~~~--g~~~~~vVItVPa~f~~-----------------~qR~al~~Aa~~aGl~~~~lv~EP~AAA 122 (211)
...+.+.+.+...+.- ..++..+.|++|...+. .-++.+. +..|++ +.+.|+..|||
T Consensus 47 ~~~l~~~i~~~~~~~~~~~~~i~~igi~~pG~vd~~~g~v~~~~~l~w~~~~~l~~~l~---~~~~~p-v~v~ND~~aaa 122 (326)
T 2qm1_A 47 VPSIIESIRHRIDLYNMKKEDFVGIGMGTPGSVDIEKGTVVGAYNLNWTTVQPVKEQIE---SALGIP-FALDNDANVAA 122 (326)
T ss_dssp HHHHHHHHHHHHHHTTCCGGGEEEEEEEESSEEETTTTEEECBGGGTBCSCBCHHHHHH---HHHCSC-EEEEEHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCccceeEEEEecccceeCCCCEEEecCCCCccCCchHHHHHH---HHhCCC-EEEecHHHHHH
Confidence 5555555555443321 13456777888875422 1123333 335776 56999999999
Q ss_pred HHcccccCCCCCceEEEeecCCCceEEEEE
Q psy471 123 LAYGLDKNLKGERNVKLPKMLEPLLVLTLR 152 (211)
Q Consensus 123 l~y~~~~~~~~~~~vLV~D~GggT~Dvsv~ 152 (211)
++-.+.......++++++-+|.| +-.+++
T Consensus 123 ~~e~~~g~~~~~~~~~~l~~GtG-iG~giv 151 (326)
T 2qm1_A 123 LGERWKGAGENNPDVIFITLGTG-VGGGIV 151 (326)
T ss_dssp HHHHHHSTTTTCSCEEEEEESSS-EEEEEE
T ss_pred HHHHHhCCCCCCCcEEEEEECCc-eEEEEE
Confidence 88544333234567888888888 455555
No 38
>4gic_A HDH, histidinol dehydrogenase; protein structure initiative, STR genomics, PSI-biology, NEW YORK structural genomics researc consortium; 2.05A {Methylococcus capsulatus}
Probab=78.01 E-value=8.4 Score=34.88 Aligned_cols=86 Identities=22% Similarity=0.248 Sum_probs=58.6
Q ss_pred HHHHHHHHHHHHHHhhccccceeeEccCCCccHHHHHHHHHHHHHhCCceeEEeechhH-HHHHcccccCCC-----CCc
Q psy471 62 LFQLLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTA-AALAYGLDKNLK-----GER 135 (211)
Q Consensus 62 ~a~iL~~L~~~a~~~~g~~~~~vVItVPa~f~~~qR~al~~Aa~~aGl~~~~lv~EP~A-AAl~y~~~~~~~-----~~~ 135 (211)
++.++..+-.... | +..+|++.|+. +..---.++-||..+|++.+.-+--..| |||+||...-.+ .|+
T Consensus 146 SsvLM~aiPAkVA---G--V~~Iv~~tPp~-~G~i~p~iL~AA~l~Gv~eIy~vGGAQAIAAlAyGTetI~~VDkIvGPG 219 (423)
T 4gic_A 146 SSVLMNAVPAKVA---G--VPELIMAVPAP-RGELNALVLAAAYISGVDRVFRIGGAQAVAALAYGTETVPRVDKIVGPG 219 (423)
T ss_dssp HHHHHHHHHHHHH---T--CSEEEEECCCG-GGCCCHHHHHHHHHHTCCEEECCCHHHHHHHHHHCCSSSCCCSEEECCC
T ss_pred hHHHHhhccHHHh---C--CCeEEEecCCC-CCCccHHHHHHHHhcCCcEEEEcCChhhhhhhccCCCcccceeEEecCC
Confidence 4445544444432 4 78889999983 3334457899999999999988888888 678898654322 111
Q ss_pred e------------EEEeecCCCceEEEEEe
Q psy471 136 N------------VKLPKMLEPLLVLTLRK 153 (211)
Q Consensus 136 ~------------vLV~D~GggT~Dvsv~~ 153 (211)
| .+-+||=+|-+++.|+.
T Consensus 220 N~yVa~AKr~v~g~VgIDm~AGPSEilViA 249 (423)
T 4gic_A 220 NIYVATAKKLVFGQVGIDMVAGPSEILVIS 249 (423)
T ss_dssp CHHHHHHHHHHBTTBEECCCCCCCEEEEEE
T ss_pred cHHHHHHHHHhcCCcCcccccccceEEEEe
Confidence 1 25678888888888875
No 39
>3vgl_A Glucokinase; ROK family, transferase; HET: BGC ANP; 1.55A {Streptomyces griseus} PDB: 3vgk_A* 3vgm_A*
Probab=76.18 E-value=8.4 Score=32.55 Aligned_cols=68 Identities=19% Similarity=0.139 Sum_probs=44.6
Q ss_pred ccceeeEccCCCccHHH----------------HHHHHHHHHHhCCceeEEeechhHHHHHcccccCCCCCceEEEeecC
Q psy471 80 SVRDAVITVPAYFNDAQ----------------RQATKDAGAIAGLNVMRIVNEPTAAALAYGLDKNLKGERNVKLPKML 143 (211)
Q Consensus 80 ~~~~vVItVPa~f~~~q----------------R~al~~Aa~~aGl~~~~lv~EP~AAAl~y~~~~~~~~~~~vLV~D~G 143 (211)
++..+.|++|...+... ++.+. +..|++ +.+.|+..|||++-.+.......++++++-+|
T Consensus 56 ~i~gigi~~pG~vd~~~g~v~~~~~l~w~~~~l~~~l~---~~~~~p-v~v~NDa~aaal~E~~~g~~~~~~~~~~l~~G 131 (321)
T 3vgl_A 56 DVEAVGIGAAGYVDDKRATVLFAPNIDWRHEPLKDKVE---QRVGLP-VVVENDANAAAWGEYRFGAGQGHDDVICITLG 131 (321)
T ss_dssp CEEEEEEEESSEECTTSSCEEECSSSCCEEECHHHHHH---HHHCSC-EEEEEHHHHHHHHHHHHSTTTTCSSEEEEEES
T ss_pred CceEEEEeccccEeCCCCEEEeCCCCCCcCCCHHHHHh---hhhCCC-EEEEehhhhHHHHHHHhCCCCCCCCEEEEEeC
Confidence 56778888887654321 23333 345776 55999999999986544333356778888888
Q ss_pred CCceEEEEE
Q psy471 144 EPLLVLTLR 152 (211)
Q Consensus 144 ggT~Dvsv~ 152 (211)
.| .-.+++
T Consensus 132 tG-iG~gii 139 (321)
T 3vgl_A 132 TG-LGGGII 139 (321)
T ss_dssp SS-EEEEEE
T ss_pred cc-eEEEEE
Confidence 87 555554
No 40
>3cet_A Conserved archaeal protein; Q6M145, MRR63, NESG, XRAY, structure, structural genomics, PSI-2, protein structure initiative; 1.80A {Methanococcus maripaludis S2} PDB: 3c0b_A
Probab=74.97 E-value=2.2 Score=37.54 Aligned_cols=36 Identities=11% Similarity=-0.128 Sum_probs=25.0
Q ss_pred EeechhHHHHHcccccCCCCCceEEEeecCCCceEEEEEe
Q psy471 114 IVNEPTAAALAYGLDKNLKGERNVKLPKMLEPLLVLTLRK 153 (211)
Q Consensus 114 lv~EP~AAAl~y~~~~~~~~~~~vLV~D~GggT~Dvsv~~ 153 (211)
...-|.|.|...+.... .+.+++|+|+.|||+..+.
T Consensus 110 aaanw~ASa~~~A~~~~----~~~llvDIGsTTTDIipi~ 145 (334)
T 3cet_A 110 SASNWCGTAKWVSKNIE----ENCILVDMGSTTTDIIPIV 145 (334)
T ss_dssp BCCSSHHHHHHHHHHTC----SSEEEEEECSSCEEEEEEE
T ss_pred HhcCHHHHHHHHHHhcC----CCEEEEEcCcchhhhhhhc
Confidence 44567676663333311 3589999999999999886
No 41
>1kae_A HDH, histidinol dehydrogenase; L-histidinol dehydrogenase, homodimer, rossman fold, 4 domai L-histidine biosynthesis, NAD cofactor; HET: HSO NAD; 1.70A {Escherichia coli} SCOP: c.82.1.2 PDB: 1k75_A* 1kah_A* 1kar_A
Probab=73.37 E-value=8 Score=35.11 Aligned_cols=83 Identities=19% Similarity=0.151 Sum_probs=57.8
Q ss_pred HHHHHHHHHHHHHHhhccccceeeEccCCCccHHHHHHHHHHHHHhCCceeEEeechhH-HHHHcccccCCC-----CCc
Q psy471 62 LFQLLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTA-AALAYGLDKNLK-----GER 135 (211)
Q Consensus 62 ~a~iL~~L~~~a~~~~g~~~~~vVItVPa~f~~~qR~al~~Aa~~aGl~~~~lv~EP~A-AAl~y~~~~~~~-----~~~ 135 (211)
++.++..+-.... .+..+|++.|+. ---.++-||..+|++.+.-+--..| |||+||-..-.+ .++
T Consensus 140 SsvLM~aiPAkVA-----GV~~Iv~~tPp~----i~p~iL~AA~l~Gv~eIy~vGGAQAIAAlAyGTetIp~VDkI~GPG 210 (434)
T 1kae_A 140 STVLMLATPASIA-----GCKKVVLCSPPP----IADEILYAAQLCGVQDVFNVGGAQAIAALAFGTESVPKVDKIFGPG 210 (434)
T ss_dssp HHHHHHHHHHHHH-----TCSEEEEEECSS----CCHHHHHHHHHTTCCEEEECCHHHHHHHHHHCCSSSCCCSEEECCC
T ss_pred hHHHHhhccHhhc-----CCCeEEEECCCC----CCHHHHHHHHHcCCCEEeecccHHHHHHHHcCCCCCCCccEEECCC
Confidence 4445555544433 488999999982 3357889999999999999988888 678898543211 111
Q ss_pred e---------------EEEeecCCCceEEEEEe
Q psy471 136 N---------------VKLPKMLEPLLVLTLRK 153 (211)
Q Consensus 136 ~---------------vLV~D~GggT~Dvsv~~ 153 (211)
| .+-+||=+|-+++-|+.
T Consensus 211 N~yVa~AKr~Vs~~~G~VgIDm~AGPSEilViA 243 (434)
T 1kae_A 211 NAFVTEAKRQVSQRLDGAAIDMPAGPSEVLVIA 243 (434)
T ss_dssp CHHHHHHHHHHHHCTTSCEESCCCCCCEEEEEE
T ss_pred cHHHHHHHHHhHhhcCccccCCCCCCceEEEEe
Confidence 1 23488888988888875
No 42
>4db3_A Glcnac kinase, N-acetyl-D-glucosamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; 1.95A {Vibrio vulnificus}
Probab=70.33 E-value=6.2 Score=33.59 Aligned_cols=45 Identities=20% Similarity=0.121 Sum_probs=31.4
Q ss_pred HhCCceeEEeechhHHHHHcccccCCCCCceEEEeecCCCceEEEEE
Q psy471 106 IAGLNVMRIVNEPTAAALAYGLDKNLKGERNVKLPKMLEPLLVLTLR 152 (211)
Q Consensus 106 ~aGl~~~~lv~EP~AAAl~y~~~~~~~~~~~vLV~D~GggT~Dvsv~ 152 (211)
..|++ +.+.|+..|||++-.+....+..++++++-+|.| +-.+++
T Consensus 119 ~~~~p-V~v~NDa~aaalgE~~~g~~~~~~~~~~l~~GtG-iG~gii 163 (327)
T 4db3_A 119 KIGRS-VKIENDANCFALSEAWDEELQDAPSVMGLILGTG-FGGGLI 163 (327)
T ss_dssp HHSSC-CEEEEHHHHHHHHHHTSTTTTTCSEEEEEEESSS-EEEEEE
T ss_pred HHCCC-EEEecchhHHHHHHHHhCCCCCCCcEEEEEeCcc-ceEEEE
Confidence 45776 5699999999998655444345677888888877 444444
No 43
>2ch5_A NAGK protein; transferase, N-acetylglucosamine, glcnac, sugar kinase, RIBO H fold, sugar kinase/HSP70/actin superfamily, domain rotati conformation; HET: NAG NDG; 1.9A {Homo sapiens} SCOP: c.55.1.5 c.55.1.5 PDB: 2ch6_A*
Probab=67.33 E-value=24 Score=29.69 Aligned_cols=62 Identities=3% Similarity=-0.158 Sum_probs=40.1
Q ss_pred ccceeeEccCCCccHHHHHHHHHHHHH-hC--CceeEEeechhHHHHHcccccCCCCCceEEEeecCCCceE
Q psy471 80 SVRDAVITVPAYFNDAQRQATKDAGAI-AG--LNVMRIVNEPTAAALAYGLDKNLKGERNVKLPKMLEPLLV 148 (211)
Q Consensus 80 ~~~~vVItVPa~f~~~qR~al~~Aa~~-aG--l~~~~lv~EP~AAAl~y~~~~~~~~~~~vLV~D~GggT~D 148 (211)
++..+.|++|...+......+++.... .| .-.+.+.|+..|||+++ +. ++.+++-+|.|.--
T Consensus 70 ~i~gigi~~pG~vd~~~~~~l~~~l~~~~~~~~~pv~v~NDa~aaa~a~-~~------~~~v~v~~GTGig~ 134 (347)
T 2ch5_A 70 PLRSLGLSLSGGDQEDAGRILIEELRDRFPYLSESYLITTDAAGSIATA-TP------DGGVVLISGTGSNC 134 (347)
T ss_dssp CBSEEEEEETTTTCHHHHHHHHHHHHHHCTTSBSCEEEEEHHHHHHHHH-CS------SCEEEEEESSSEEE
T ss_pred ceeEEEEeccCCCchHHHHHHHHHHHHhcCCCCceEEEECcHHHHHHhh-CC------CCcEEEEEcCCcee
Confidence 567899999999877655555554443 34 13466999999999984 21 33445555665533
No 44
>3bex_A Type III pantothenate kinase; actin-like fold, ATP-binding, coenzyme A biosynthesis, cytoplasm, metal-binding, nucleotide-binding, potassium; HET: PAU; 1.51A {Thermotoga maritima} SCOP: c.55.1.13 c.55.1.13 PDB: 3bf1_A* 3bf3_A* 2gtd_A
Probab=66.69 E-value=16 Score=30.21 Aligned_cols=63 Identities=13% Similarity=0.106 Sum_probs=33.2
Q ss_pred ccceeeEccCCCccHHHHHHHHHHHHH-hCCceeEE----------eech-------hHHHHHcccccCCCCCceEEEee
Q psy471 80 SVRDAVITVPAYFNDAQRQATKDAGAI-AGLNVMRI----------VNEP-------TAAALAYGLDKNLKGERNVKLPK 141 (211)
Q Consensus 80 ~~~~vVItVPa~f~~~qR~al~~Aa~~-aGl~~~~l----------v~EP-------~AAAl~y~~~~~~~~~~~vLV~D 141 (211)
.+..+.|+.|. +.....++.++.. .+..++.+ +..| .|+|++.... .++.++|+|
T Consensus 56 ~i~~i~IsSVv---p~~~~~~~~~~~~~~~~~p~~v~~~~~gl~~~y~~P~~lG~DR~~~~~aa~~~----~~~~~iVvD 128 (249)
T 3bex_A 56 EIKGIGVASVV---PTQNTVIERFSQKYFHISPIWVKAKNGCVKWNVKNPSEVGADRVANVVAFVKE----YGKNGIIID 128 (249)
T ss_dssp GEEEEEEEESC---HHHHHHHHHHHHHHHSCCCEECCCCSSSSEECSSCGGGSCHHHHHHHHHHHHH----TCSCEEEEE
T ss_pred cCCEEEEEcCc---HHHHHHHHHHHHHhcCCCeEEEEccCCCceeccCChhhcCHHHHHHHHHHHHH----cCCCEEEEE
Confidence 46778888775 4444455544442 34433221 2223 2444432221 146799999
Q ss_pred cCCCceEE
Q psy471 142 MLEPLLVL 149 (211)
Q Consensus 142 ~GggT~Dv 149 (211)
||..+|=-
T Consensus 129 ~GTA~T~d 136 (249)
T 3bex_A 129 MGTATTVD 136 (249)
T ss_dssp ESSEEEEE
T ss_pred cCCceEEE
Confidence 99766533
No 45
>3vov_A Glucokinase, hexokinase; ROK, sugar kinase, transferase; 2.02A {Thermus thermophilus}
Probab=66.06 E-value=7.4 Score=32.70 Aligned_cols=46 Identities=20% Similarity=0.076 Sum_probs=30.4
Q ss_pred HHhCCceeEEeechhHHHHHcccccCCCCCceEEEeecCCCceEEEEE
Q psy471 105 AIAGLNVMRIVNEPTAAALAYGLDKNLKGERNVKLPKMLEPLLVLTLR 152 (211)
Q Consensus 105 ~~aGl~~~~lv~EP~AAAl~y~~~~~~~~~~~vLV~D~GggT~Dvsv~ 152 (211)
+..|++ +.+.|+..|||++-.+.......++++++-+|.| .-.+++
T Consensus 96 ~~~~~p-v~v~NDa~aaal~E~~~g~~~~~~~~~~l~~GtG-iG~gii 141 (302)
T 3vov_A 96 EATGRP-VFLENDANAAALAEHHLGAAQGEESSLYLTVSTG-IGGGVV 141 (302)
T ss_dssp HHHSSC-EEEEEHHHHHHHHHHHHSTTTTCSCEEEEEESSS-EEEEEE
T ss_pred HhhCCC-EEEEechHHHHHHHHHhCCCCCCCCEEEEEECCc-eeEEEE
Confidence 345666 5599999999998655433335567788888877 333443
No 46
>2ap1_A Putative regulator protein; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.90A {Salmonella typhimurium} SCOP: c.55.1.10 c.55.1.10
Probab=66.05 E-value=10 Score=31.86 Aligned_cols=44 Identities=16% Similarity=0.008 Sum_probs=29.5
Q ss_pred hCCceeEEeechhHHHHHcccccCCCCCceEEEeecCCCceEEEEE
Q psy471 107 AGLNVMRIVNEPTAAALAYGLDKNLKGERNVKLPKMLEPLLVLTLR 152 (211)
Q Consensus 107 aGl~~~~lv~EP~AAAl~y~~~~~~~~~~~vLV~D~GggT~Dvsv~ 152 (211)
.|++ +.+.|+..|||++-.+....+..++++++-+|.| .-.+++
T Consensus 120 ~~~p-v~v~NDa~aaalgE~~~g~~~~~~~~v~l~~GtG-iG~giv 163 (327)
T 2ap1_A 120 LDRD-VRLDNDANCFALSEAWDDEFTQYPLVMGLILGTG-VGGGLV 163 (327)
T ss_dssp HTSC-EEEEEHHHHHHHHHHTSTTGGGCSEEEEEEESSS-EEEEEE
T ss_pred HCCC-EEEecHHHHHHHHHHHhCcCCCCCcEEEEEECCc-EEEEEE
Confidence 4766 5699999999987543322234567888888877 344544
No 47
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=65.65 E-value=32 Score=24.10 Aligned_cols=82 Identities=11% Similarity=0.074 Sum_probs=49.2
Q ss_pred CchHHHHHHHHHHHHHHHhhccccceeeEccCCCccHHHHHHHHHHHHHhCCceeEEeechhHHHHHcccccCCCCCceE
Q psy471 58 HSPRLFQLLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYGLDKNLKGERNV 137 (211)
Q Consensus 58 ~~~~~a~iL~~L~~~a~~~~g~~~~~vVItVPa~f~~~qR~al~~Aa~~aGl~~~~lv~EP~AAAl~y~~~~~~~~~~~v 137 (211)
.||.+...+..|.+.+..+.+. +.=+.|++...-.......++..+...|++...+++.....+-.|++..- -.+
T Consensus 40 ~C~~C~~~~~~l~~l~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~----P~~ 114 (148)
T 2b5x_A 40 SCHLCKEAMPQVNEFRDKYQDQ-LNVVAVHMPRSEDDLDPGKIKETAAEHDITQPIFVDSDHALTDAFENEYV----PAY 114 (148)
T ss_dssp TCHHHHHHHHHHHHHHHHHTTT-SEEEEEECCCSTTTSSHHHHHHHHHHTTCCSCEEECSSCHHHHHTCCCCS----SEE
T ss_pred CCHHHHHHhHHHHHHHHHhcCC-cEEEEEEcCCCccccCHHHHHHHHHHcCCCcceEECCchhHHHHhCCCCC----CEE
Confidence 4677777778887777665443 54455555433222244556666777788766566665666666765432 356
Q ss_pred EEeecCC
Q psy471 138 KLPKMLE 144 (211)
Q Consensus 138 LV~D~Gg 144 (211)
+|+|-.|
T Consensus 115 ~lid~~G 121 (148)
T 2b5x_A 115 YVFDKTG 121 (148)
T ss_dssp EEECTTC
T ss_pred EEECCCC
Confidence 6676554
No 48
>2aa4_A Mannac kinase, putative N-acetylmannosamine kinase; sugar methabolism, structural genomics, PSI, protein structure initiative; 2.20A {Escherichia coli} SCOP: c.55.1.10 c.55.1.10
Probab=63.63 E-value=23 Score=28.95 Aligned_cols=44 Identities=14% Similarity=-0.028 Sum_probs=30.5
Q ss_pred HhCCceeEEeechhHHHHHcccccCCCCCceEEEeecCCCceEEEEE
Q psy471 106 IAGLNVMRIVNEPTAAALAYGLDKNLKGERNVKLPKMLEPLLVLTLR 152 (211)
Q Consensus 106 ~aGl~~~~lv~EP~AAAl~y~~~~~~~~~~~vLV~D~GggT~Dvsv~ 152 (211)
..|++ +.+.|+..|||++..+....... +++++-+|.| .-.+++
T Consensus 95 ~~~~p-v~v~NDa~aaa~~e~~~g~~~~~-~~v~l~~GtG-iG~gii 138 (289)
T 2aa4_A 95 LTNLP-TIAINDAQAAAWAEFQALDGDIT-DMVFITVSTG-VGGGVV 138 (289)
T ss_dssp HHCSC-EEEEEHHHHHHHHHHHTSCTTCC-CEEEEEESSS-EEEEEE
T ss_pred HHCCC-EEEechHHHHHHHHHHhCCCCCc-eEEEEEeCcc-EEEEEE
Confidence 35775 56999999999986544332234 7888889888 455554
No 49
>2e2o_A Hexokinase; acetate and sugar kinases, HSP70, actin superfamily, ribonuc fold, sugar kinase, glucose, phosphoryl transfer, transferase; HET: BGC; 1.65A {Sulfolobus tokodaii} PDB: 2e2n_A* 2e2p_A* 2e2q_A*
Probab=62.75 E-value=39 Score=27.74 Aligned_cols=74 Identities=9% Similarity=-0.010 Sum_probs=44.5
Q ss_pred HHHHHHHHHHHhhccccceeeEccCCCccHH-HHHHHHHHHHHhCCceeEEeechhHHHHHcccccCCCCCceEEEeecC
Q psy471 65 LLTKMKETAEAYLGHSVRDAVITVPAYFNDA-QRQATKDAGAIAGLNVMRIVNEPTAAALAYGLDKNLKGERNVKLPKML 143 (211)
Q Consensus 65 iL~~L~~~a~~~~g~~~~~vVItVPa~f~~~-qR~al~~Aa~~aGl~~~~lv~EP~AAAl~y~~~~~~~~~~~vLV~D~G 143 (211)
++..+.+.....+...+..+.|++|.. +.. ....+.+.....|+ .+.+.|+..|||++-.. .++++++-+|
T Consensus 44 ~~~~i~~~i~~~~~~~~~~igi~~~G~-~~~~~~~~l~~~l~~~~~-pv~v~ND~~aaa~~e~~------~~~~v~l~~G 115 (299)
T 2e2o_A 44 AIENIKEAVKIAAKGEADVVGMGVAGL-DSKFDWENFTPLASLIAP-KVIIQHDGVIALFAETL------GEPGVVVIAG 115 (299)
T ss_dssp HHHHHHHHHHHHHTSCCSEEEEEETTC-CSHHHHHHHHHHHTTSSS-EEEEEEHHHHHHHHHHT------TSCEEEEEES
T ss_pred HHHHHHHHHHHHHhcCCCEEEEEcCCC-CchhHHHHHHHHHHhCCC-CEEEeCcHHHHHhhccC------CCCeEEEEec
Confidence 444444444444332266899999998 532 22233333333443 45689999999987543 3456777788
Q ss_pred CCc
Q psy471 144 EPL 146 (211)
Q Consensus 144 ggT 146 (211)
.|.
T Consensus 116 TG~ 118 (299)
T 2e2o_A 116 TGS 118 (299)
T ss_dssp SSE
T ss_pred CCE
Confidence 884
No 50
>1msz_A DNA-binding protein smubp-2; R3H fold; NMR {Homo sapiens} SCOP: d.68.7.1
Probab=62.72 E-value=7.6 Score=27.43 Aligned_cols=30 Identities=17% Similarity=0.220 Sum_probs=26.7
Q ss_pred eeeEccCCCccHHHHHHHHHHHHHhCCcee
Q psy471 83 DAVITVPAYFNDAQRQATKDAGAIAGLNVM 112 (211)
Q Consensus 83 ~vVItVPa~f~~~qR~al~~Aa~~aGl~~~ 112 (211)
.-.++.|+.++..+|..+-..|...||...
T Consensus 33 ~~~l~FP~sLs~~eR~~IH~lA~~~GL~h~ 62 (86)
T 1msz_A 33 KMQLEFPPSLNSHDRLRVHQIAEEHGLRHD 62 (86)
T ss_dssp CSEEEECTTCCSHHHHHHHHHHHHTTEEEE
T ss_pred CcEEEcCCCCCHHHHHHHHHHHHHcCCCcc
Confidence 357999999999999999999999998655
No 51
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=62.69 E-value=34 Score=23.36 Aligned_cols=82 Identities=12% Similarity=0.052 Sum_probs=45.0
Q ss_pred CchHHHHHHHHHHHHHHHhhccccceeeEccCCCccHHHHHHHHHHHHHhCC-ceeEEeechhHHHHHcccccCCCCCce
Q psy471 58 HSPRLFQLLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGL-NVMRIVNEPTAAALAYGLDKNLKGERN 136 (211)
Q Consensus 58 ~~~~~a~iL~~L~~~a~~~~g~~~~~vVItVPa~f~~~qR~al~~Aa~~aGl-~~~~lv~EP~AAAl~y~~~~~~~~~~~ 136 (211)
.||.+...+..|.+.+.. .+..+.-+.|..+..-....+..++..+...|+ +...+.+.....+-.|++.. --.
T Consensus 33 ~C~~C~~~~~~l~~~~~~-~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~----~P~ 107 (138)
T 4evm_A 33 WCSICLASLPDTDEIAKE-AGDDYVVLTVVSPGHKGEQSEADFKNWYKGLDYKNLPVLVDPSGKLLETYGVRS----YPT 107 (138)
T ss_dssp TCHHHHHHHHHHHHHHHT-CTTTEEEEEEECTTSTTCCCHHHHHHHHTTCCCTTCCEEECTTCHHHHHTTCCS----SSE
T ss_pred cCHHHHHHHHHHHHHHHH-hCCCcEEEEEEcCCCCchhhHHHHHHHHhhcCCCCeeEEECcchHHHHHcCccc----CCe
Confidence 466677788888777766 444444444433333234445556666666777 44434444444455566543 235
Q ss_pred EEEeecCC
Q psy471 137 VKLPKMLE 144 (211)
Q Consensus 137 vLV~D~Gg 144 (211)
++|+|-.|
T Consensus 108 ~~lid~~G 115 (138)
T 4evm_A 108 QAFIDKEG 115 (138)
T ss_dssp EEEECTTC
T ss_pred EEEECCCC
Confidence 66666554
No 52
>1z6r_A MLC protein; transcriptional repressor, ROK family protein, DNA binding P helix-turn-helix, phosphotransferase system; 2.70A {Escherichia coli} SCOP: a.4.5.63 c.55.1.10 c.55.1.10 PDB: 3bp8_A
Probab=60.27 E-value=17 Score=31.61 Aligned_cols=45 Identities=18% Similarity=0.116 Sum_probs=30.3
Q ss_pred HhCCceeEEeechhHHHHHcccccCCCCCceEEEeecCCCceEEEEE
Q psy471 106 IAGLNVMRIVNEPTAAALAYGLDKNLKGERNVKLPKMLEPLLVLTLR 152 (211)
Q Consensus 106 ~aGl~~~~lv~EP~AAAl~y~~~~~~~~~~~vLV~D~GggT~Dvsv~ 152 (211)
..|++ +.+.|+..|||++-.+.......++++++-+|.| .-.+++
T Consensus 185 ~~~~p-v~v~NDa~aaalaE~~~g~~~~~~~~v~l~~GtG-iG~giv 229 (406)
T 1z6r_A 185 HTGVP-VYIQHDISAWTMAEALFGASRGARDVIQVVIDHN-VGAGVI 229 (406)
T ss_dssp HHSSC-EEEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSS-EEEEEE
T ss_pred HHCCC-EEEechhHHHHHHHHHhcCCCCCCcEEEEEECCc-EEEEEE
Confidence 35776 5599999999998654433234567788888877 445554
No 53
>1z05_A Transcriptional regulator, ROK family; structural genomics, protein structure initiative, midwest center for structural genomics; 2.00A {Vibrio cholerae o1 biovar eltor} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=59.69 E-value=12 Score=33.00 Aligned_cols=45 Identities=24% Similarity=0.146 Sum_probs=30.2
Q ss_pred HhCCceeEEeechhHHHHHcccccCCCCCceEEEeecCCCceEEEEE
Q psy471 106 IAGLNVMRIVNEPTAAALAYGLDKNLKGERNVKLPKMLEPLLVLTLR 152 (211)
Q Consensus 106 ~aGl~~~~lv~EP~AAAl~y~~~~~~~~~~~vLV~D~GggT~Dvsv~ 152 (211)
..|++ +.+.|+..|||++-.+.......++++++-+|.| .-.+++
T Consensus 207 ~~~~p-V~v~NDa~aaalaE~~~g~~~~~~~~v~l~~GtG-iG~giv 251 (429)
T 1z05_A 207 ATGLP-VFVANDTRAWALAEKLFGHSQDVDNSVLISIHHG-LGAGIV 251 (429)
T ss_dssp HHCSC-EEEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSS-EEEEEE
T ss_pred HhCCC-EEEechhHHHHHHHHHhCCCCCCCcEEEEEECCc-EEEEEE
Confidence 35776 5599999999998654433234567777888877 344544
No 54
>3mcp_A Glucokinase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, transferase; 3.00A {Parabacteroides distasonis}
Probab=57.82 E-value=23 Score=30.91 Aligned_cols=82 Identities=17% Similarity=0.045 Sum_probs=46.4
Q ss_pred HHHHHHHHH---HHHHhhccccceeeEccCCCccHH-------------H-HHHHH-HHHHHhCCceeEEeechhHHHHH
Q psy471 63 FQLLTKMKE---TAEAYLGHSVRDAVITVPAYFNDA-------------Q-RQATK-DAGAIAGLNVMRIVNEPTAAALA 124 (211)
Q Consensus 63 a~iL~~L~~---~a~~~~g~~~~~vVItVPa~f~~~-------------q-R~al~-~Aa~~aGl~~~~lv~EP~AAAl~ 124 (211)
..++..+.+ ...+.+..++..+.|++|...+.. . ...+. ...+..|++ +.+.|+..|+|++
T Consensus 46 ~~~l~~i~~~~~~i~~~~~~~i~gIGIavPG~Vd~~~G~i~~~~nlp~w~~~~~l~~~L~~~~g~P-V~veNDanaaAlg 124 (366)
T 3mcp_A 46 DKCLGNLVEGFKAIQAGLPEAPVAISFAFPGPADYQAGIIGDLPNFPSFRGGVALGPFLEDIFGIP-VFINNDGSLFAYG 124 (366)
T ss_dssp HHHHHHHHHHHHHHHTTCSSCCCEEEEECCSSEETTTTEECCCTTCGGGTTCBCHHHHHHHHHCSC-EEEECHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhcCCeEEEEEecceEeCCCCEEEeCCCcccccCCCCHHHHHHHHHCCC-EEEechhhHHHHH
Confidence 344555555 555444445666667766554311 0 00111 123345777 5599999999998
Q ss_pred ccccc-------------CCCCCceEEEeecCCC
Q psy471 125 YGLDK-------------NLKGERNVKLPKMLEP 145 (211)
Q Consensus 125 y~~~~-------------~~~~~~~vLV~D~Ggg 145 (211)
-.+.. ..+..++++++-+|.|
T Consensus 125 E~~~G~~p~~~~~l~~~g~~~~~~~~v~l~lGtG 158 (366)
T 3mcp_A 125 EALTGVLPEINRRLREAGSTKRYKNLLGVTLGTG 158 (366)
T ss_dssp HHHTSHHHHHHHHHHHTTCCCCCCEEEEEEESSS
T ss_pred HHHhCCCcccccccccccccCCCCcEEEEEECCc
Confidence 54433 2235677888888765
No 55
>1woq_A Inorganic polyphosphate/ATP-glucomannokinase; transferase; HET: BGC; 1.80A {Arthrobacter SP} SCOP: c.55.1.10 c.55.1.10
Probab=57.82 E-value=38 Score=27.52 Aligned_cols=45 Identities=18% Similarity=0.093 Sum_probs=28.8
Q ss_pred HhCCceeEEeechhHHHHHcccccCCCCC-ceEEEeecCCCceEEEEE
Q psy471 106 IAGLNVMRIVNEPTAAALAYGLDKNLKGE-RNVKLPKMLEPLLVLTLR 152 (211)
Q Consensus 106 ~aGl~~~~lv~EP~AAAl~y~~~~~~~~~-~~vLV~D~GggT~Dvsv~ 152 (211)
..|++ +.+.|+..|||++..+....... ++++++-+|.| .-.+++
T Consensus 113 ~~~~p-V~v~NDanaaalaE~~~g~~~~~~~~~~~l~~GtG-IG~giv 158 (267)
T 1woq_A 113 RLGRP-VEVINDADAAGLAEARYGAGAGVKGTVLVITLGTG-IGSAFI 158 (267)
T ss_dssp HHTSC-EEEEEHHHHHHHHHHHHSTTTTCCSEEEEEEESSS-EEEEEE
T ss_pred HHCCC-EEEeehhHHHHHHHHHhCCCCCCCCcEEEEEECcc-eEEEEE
Confidence 35776 56999999999985443322223 35677777776 555554
No 56
>3u5r_E Uncharacterized protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, hypothetical protein; 2.05A {Sinorhizobium meliloti}
Probab=56.20 E-value=43 Score=26.18 Aligned_cols=84 Identities=14% Similarity=0.162 Sum_probs=50.4
Q ss_pred CCchHHHHHHHHHHHHHHHhhccccceeeEcc--CCCccHHHHHHHHHHHHHhCCceeEEeechhHHHHHcccccCCCCC
Q psy471 57 HHSPRLFQLLTKMKETAEAYLGHSVRDAVITV--PAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYGLDKNLKGE 134 (211)
Q Consensus 57 ~~~~~~a~iL~~L~~~a~~~~g~~~~~vVItV--Pa~f~~~qR~al~~Aa~~aGl~~~~lv~EP~AAAl~y~~~~~~~~~ 134 (211)
-.||.+...+..|.+....+.+..+.=+.|++ |..+.......++.-+...|++...+.+.....+-.|++...
T Consensus 69 ~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Vs~d~~~~~~~d~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~~v~~~---- 144 (218)
T 3u5r_E 69 NRCPFVVLIREALAKFAGDYAGQGLAVVAINSNDAQAFPEETLERVGAEVKAYGYGFPYLKDASQSVAKAYGAACT---- 144 (218)
T ss_dssp SSCHHHHTTHHHHHHHHHHHTTTTEEEEEEECSCTTTCGGGSHHHHHHHHHHHTCCSCEEECTTCHHHHHHTCCEE----
T ss_pred CCCccHHHHHHHHHHHHHHHHhCCcEEEEEECCcccccccCCHHHHHHHHHHhCCCccEEECCccHHHHHcCCCCC----
Confidence 35777888888888888877554444344444 122222445556666677788777666655666666776532
Q ss_pred ceEEEeecCC
Q psy471 135 RNVKLPKMLE 144 (211)
Q Consensus 135 ~~vLV~D~Gg 144 (211)
-.++|+|=.|
T Consensus 145 P~~~liD~~G 154 (218)
T 3u5r_E 145 PDFFLYDRER 154 (218)
T ss_dssp SEEEEECTTC
T ss_pred CeEEEECCCC
Confidence 2455566544
No 57
>2hoe_A N-acetylglucosamine kinase; TM1224, structural genomics, PSI-2, protein structure initiative, joint center structural genomics, JCSG; 2.46A {Thermotoga maritima} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=55.86 E-value=9.5 Score=33.06 Aligned_cols=67 Identities=7% Similarity=0.044 Sum_probs=40.8
Q ss_pred cccceeeEccCCCccHH----------------HHHHHHHHHHHhCCceeEEeechhHHHHHcccccCCCCCceEEEeec
Q psy471 79 HSVRDAVITVPAYFNDA----------------QRQATKDAGAIAGLNVMRIVNEPTAAALAYGLDKNLKGERNVKLPKM 142 (211)
Q Consensus 79 ~~~~~vVItVPa~f~~~----------------qR~al~~Aa~~aGl~~~~lv~EP~AAAl~y~~~~~~~~~~~vLV~D~ 142 (211)
.++..+.|++|...+.. -+..+. +..|++ +.+.|+..|||++-.+.... . ++++++-+
T Consensus 147 ~~i~gigi~~pG~vd~~~g~v~~~~~l~w~~~~l~~~l~---~~~~~p-V~v~NDanaaalaE~~~g~~-~-~~~v~l~~ 220 (380)
T 2hoe_A 147 SKLSALTVAAPGPIDTERGIIIDPRNFPLSQIPLANLLK---EKYGIE-VWVENDADMGAVGEKWYTKR-D-DSFAWILT 220 (380)
T ss_dssp CCCCEEEEEESSCEETTTTEECCCSSCTTBTSCHHHHHH---HHHCSE-EEEEEHHHHHHHHHHHHTTC-C-SCEEEEEE
T ss_pred CcEEEEEEEeeccEECCCCEEeccCCCCCcCCChHHHHH---HHhCCC-EEEechHHHHHHHHHHhCCC-C-CcEEEEEe
Confidence 34667778888765421 112233 335775 56999999999986443321 2 67777888
Q ss_pred CCCceEEEEE
Q psy471 143 LEPLLVLTLR 152 (211)
Q Consensus 143 GggT~Dvsv~ 152 (211)
|.|- -.+++
T Consensus 221 GtGi-G~giv 229 (380)
T 2hoe_A 221 GKGI-GAGII 229 (380)
T ss_dssp SSSC-EEEEE
T ss_pred CCce-EEEEE
Confidence 8773 34444
No 58
>2yhx_A Hexokinase B; transferase(phosphoryl,alcohol acceptr); HET: OTG; 2.10A {Saccharomyces cerevisiae} SCOP: i.12.1.1 PDB: 1hkg_A
Probab=55.80 E-value=22 Score=32.25 Aligned_cols=56 Identities=7% Similarity=-0.156 Sum_probs=40.5
Q ss_pred HHHHHHHHHHHHhCCc--eeEEeechhHHHHHcccccCCCCCceEEEeecCCCceEEEEEec
Q psy471 95 AQRQATKDAGAIAGLN--VMRIVNEPTAAALAYGLDKNLKGERNVKLPKMLEPLLVLTLRKK 154 (211)
Q Consensus 95 ~qR~al~~Aa~~aGl~--~~~lv~EP~AAAl~y~~~~~~~~~~~vLV~D~GggT~Dvsv~~~ 154 (211)
.-++.|.++....|++ ++.|+|+..|++++-.+. ..++++.+=+|.|+=-.-++..
T Consensus 164 ~v~~~L~~~l~r~glpv~vval~NDa~~tll~e~~~----~~~~~iglilGTGvgg~~i~~~ 221 (457)
T 2yhx_A 164 KLISAMXNAXFPAGDXXXSVADIXDSHGILXXVNYT----DAXIKMGIIFGSGVNAAYWCDS 221 (457)
T ss_dssp SBHHHHHHHHHHHHCCEEEEEEECHHHHHHHHHHHH----CTTEEEEEEESSSEEEEEEECG
T ss_pred HHHHHHHHhHhhcCCcceeEEEEecchhhccchhhc----CCccEEEEEECcEEEEEEEECC
Confidence 4566777777666665 588999999999997773 3457777778888665555544
No 59
>3epq_A Putative fructokinase; SCRK, ADP binding, PSI2, MCSG, structural GENO protein structure initiative, midwest center for structural genomics; HET: MLY MSE MLZ ADP; 1.66A {Bacillus subtilis} PDB: 1xc3_A 3ohr_A* 3lm9_A*
Probab=50.82 E-value=26 Score=29.43 Aligned_cols=40 Identities=15% Similarity=-0.020 Sum_probs=27.9
Q ss_pred HHhCCceeEEeechhHHHHHcccccCCCCCceEEEeecCCC
Q psy471 105 AIAGLNVMRIVNEPTAAALAYGLDKNLKGERNVKLPKMLEP 145 (211)
Q Consensus 105 ~~aGl~~~~lv~EP~AAAl~y~~~~~~~~~~~vLV~D~Ggg 145 (211)
+..|++ +.+.|+..|||++-.+....+..++++++-+|.|
T Consensus 95 ~~~~~p-V~v~NDanaaalaE~~~G~~~~~~~~~~l~~GtG 134 (302)
T 3epq_A 95 NEMXIP-VGFSTDVNAAALGEFLFGEAXGLDSCLYITIGTG 134 (302)
T ss_dssp HHHCSC-EEEEEHHHHHHHHHHHHSTTTTCSCEEEEEESSS
T ss_pred HHhCCC-EEEechhHHHHHHHHHhCCCCCCCcEEEEEECCc
Confidence 345776 5599999999998655433335567777777765
No 60
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=50.28 E-value=38 Score=24.39 Aligned_cols=83 Identities=10% Similarity=0.009 Sum_probs=45.8
Q ss_pred CchHHHHHHHHHHHHHHHhhccccceeeEccCCCccHHHHHHHHHHHHHhCCceeE-EeechhHHHHHcccccCCCCCce
Q psy471 58 HSPRLFQLLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMR-IVNEPTAAALAYGLDKNLKGERN 136 (211)
Q Consensus 58 ~~~~~a~iL~~L~~~a~~~~g~~~~~vVItVPa~f~~~qR~al~~Aa~~aGl~~~~-lv~EP~AAAl~y~~~~~~~~~~~ 136 (211)
.||.+...+..|.+.+..+....+.=+.|+++..-.......+++.+...++.... +++.....+-.|++.. --.
T Consensus 49 ~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~----~P~ 124 (164)
T 2h30_A 49 WCPLCLSELGQAEKWAQDAKFSSANLITVASPGFLHEKKDGEFQKWYAGLNYPKLPVVTDNGGTIAQNLNISV----YPS 124 (164)
T ss_dssp TCHHHHHHHHHHHHHHTCGGGTTSEEEEEECTTSTTCCCTTHHHHHHTTSCCTTSCEEECTTCHHHHHTTCCS----SSE
T ss_pred CCHHHHHHHHHHHHHHHHcccCCcEEEEEEcCCCccccCHHHHHHHHHhCCCCcceEEEcCchHHHHHcCCCc----cce
Confidence 46777778888888777654555666667766432222333444444445665233 3444444555566542 235
Q ss_pred EEEeecCC
Q psy471 137 VKLPKMLE 144 (211)
Q Consensus 137 vLV~D~Gg 144 (211)
++|+|-.|
T Consensus 125 ~~lid~~G 132 (164)
T 2h30_A 125 WALIGKDG 132 (164)
T ss_dssp EEEECTTS
T ss_pred EEEECCCC
Confidence 56666554
No 61
>2gup_A ROK family protein; sugar kinase, streptococcus pneumoniae TIGR4, AP sucrose, structural genomics, PSI; HET: SUC; 2.01A {Streptococcus pneumoniae} SCOP: c.55.1.10 c.55.1.10
Probab=48.95 E-value=18 Score=29.74 Aligned_cols=44 Identities=11% Similarity=-0.015 Sum_probs=29.6
Q ss_pred HHhCCceeEEeechhHHHHHcccccCCCCCceEEEeecCCCceEEEEE
Q psy471 105 AIAGLNVMRIVNEPTAAALAYGLDKNLKGERNVKLPKMLEPLLVLTLR 152 (211)
Q Consensus 105 ~~aGl~~~~lv~EP~AAAl~y~~~~~~~~~~~vLV~D~GggT~Dvsv~ 152 (211)
+..|++ +.+.|+..|||++..+ .....++++++-+|.| .-.+++
T Consensus 92 ~~~~~p-v~v~NDa~aaa~~e~~--~~~~~~~~v~l~~GtG-iG~giv 135 (292)
T 2gup_A 92 SSYQLP-VHLENDANCVGLSELL--AHPELENAACVVIGTG-IGGAMI 135 (292)
T ss_dssp GGGCCC-EEEEEHHHHHHHHHHH--HCTTCSSEEEEEESSS-EEEEEE
T ss_pred HHcCCC-EEEechHHHHHHHHHH--hcCCCCeEEEEEECCc-eEEEEE
Confidence 345765 5599999999998655 2224567778888877 334444
No 62
>2yhw_A Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase; transferase, sialic acid, mannac, ROK family; HET: BM3 2PE; 1.64A {Homo sapiens} PDB: 2yhy_A* 2yi1_A* 3eo3_A
Probab=47.96 E-value=21 Score=30.15 Aligned_cols=44 Identities=20% Similarity=-0.040 Sum_probs=29.3
Q ss_pred hCCceeEEeechhHHHHHcccccCCCCCceEEEeecCCCceEEEEE
Q psy471 107 AGLNVMRIVNEPTAAALAYGLDKNLKGERNVKLPKMLEPLLVLTLR 152 (211)
Q Consensus 107 aGl~~~~lv~EP~AAAl~y~~~~~~~~~~~vLV~D~GggT~Dvsv~ 152 (211)
.|++ +.+.|+..|||++-.+.......++++++-+|.| .-.+++
T Consensus 131 ~~~p-v~v~NDa~aaal~E~~~g~~~~~~~~v~i~~GtG-iG~gii 174 (343)
T 2yhw_A 131 LHLP-VWVDNDGNCAALAERKFGQGKGLENFVTLITGTG-IGGGII 174 (343)
T ss_dssp HCSC-EEEEEHHHHHHHHHHHTSTTTTCSCEEEEEESSS-EEEEEE
T ss_pred HCCC-EEEechhHHHHHHHHHhCCCCCCCcEEEEEECCC-EEEEEE
Confidence 4776 5599999999998654333234567777888877 344444
No 63
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=47.44 E-value=72 Score=22.52 Aligned_cols=79 Identities=15% Similarity=0.151 Sum_probs=45.3
Q ss_pred CchHHHHHHHHHHHHHHHhhccccceeeEccCCCccHHHHHHHHHHHHHhCCceeEEeechhHHHHHcccccCCCCCceE
Q psy471 58 HSPRLFQLLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYGLDKNLKGERNV 137 (211)
Q Consensus 58 ~~~~~a~iL~~L~~~a~~~~g~~~~~vVItVPa~f~~~qR~al~~Aa~~aGl~~~~lv~EP~AAAl~y~~~~~~~~~~~v 137 (211)
.||.+...+..|.+.+..+.+..+.-+.|++.. .....++..+...|++...+.+.....+-.|++.. --.+
T Consensus 39 ~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~~----~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~----~P~~ 110 (153)
T 2l5o_A 39 SCPGCVSEMPKIIKTANDYKNKNFQVLAVAQPI----DPIESVRQYVKDYGLPFTVMYDADKAVGQAFGTQV----YPTS 110 (153)
T ss_dssp TCTTHHHHHHHHHHHHHHGGGTTEEEEEEECTT----SCHHHHHHHHHHTTCCSEEEECSSCHHHHHHTCCS----SSEE
T ss_pred CCccHHHHHHHHHHHHHHhccCCeEEEEEecCC----CCHHHHHHHHHHcCCCceEEcCchHHHHHHcCCCc----cCeE
Confidence 355566677777777766654445444555432 22445566667778886656655555555666542 2345
Q ss_pred EEeecCC
Q psy471 138 KLPKMLE 144 (211)
Q Consensus 138 LV~D~Gg 144 (211)
+|+|-.|
T Consensus 111 ~lid~~G 117 (153)
T 2l5o_A 111 VLIGKKG 117 (153)
T ss_dssp EEECSSS
T ss_pred EEECCCC
Confidence 6666554
No 64
>1sz2_A Glucokinase, glucose kinase; ATP-dependent, glucose binding, transferase; HET: MSE BGC; 2.20A {Escherichia coli} SCOP: c.55.1.7 PDB: 1q18_A*
Probab=47.05 E-value=74 Score=26.67 Aligned_cols=64 Identities=17% Similarity=0.175 Sum_probs=40.2
Q ss_pred ccceeeEccCCCccH-----------HHHHHHHHHHHHhCCceeEEeechhHHHHHccccc--------C--CCCCceEE
Q psy471 80 SVRDAVITVPAYFND-----------AQRQATKDAGAIAGLNVMRIVNEPTAAALAYGLDK--------N--LKGERNVK 138 (211)
Q Consensus 80 ~~~~vVItVPa~f~~-----------~qR~al~~Aa~~aGl~~~~lv~EP~AAAl~y~~~~--------~--~~~~~~vL 138 (211)
++..+.|++|...+. ..++.+ .+..|++.+.+.|+-.|+|++-.+.. . ....++++
T Consensus 66 ~i~gigi~~pG~vd~~~~~~~nl~w~~~~~~l---~~~~~~p~V~v~NDanaaalgE~~~~~~~~~~~g~g~~~~~~~~~ 142 (332)
T 1sz2_A 66 EVKDGCIAIACPITGDWVAMTNHTWAFSIAEM---KKNLGFSHLEIINDFTAVSMAIPMLKKEHLIQFGGAEPVEGKPIA 142 (332)
T ss_dssp CCCEEEEEESSCCCSSEECCSSSCCCEEHHHH---HHHHTCSEEEEEEHHHHHHHHGGGCCGGGEEECSSCCCCTTCCEE
T ss_pred CccEEEEEEeCceeCCEEeeeCCCCcCCHHHH---HHHhCCCcEEEEeCHhHHhccccccChhhheecCCCCCCCCCcEE
Confidence 456677777764321 123333 34468876779999999999864421 0 12456778
Q ss_pred EeecCCCc
Q psy471 139 LPKMLEPL 146 (211)
Q Consensus 139 V~D~GggT 146 (211)
++-+|.|-
T Consensus 143 ~v~~GTGi 150 (332)
T 1sz2_A 143 VYGAGTGL 150 (332)
T ss_dssp EEEESSSE
T ss_pred EEEcCccc
Confidence 88888774
No 65
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=46.24 E-value=77 Score=22.54 Aligned_cols=83 Identities=12% Similarity=0.041 Sum_probs=48.0
Q ss_pred CchHHHH-HHHHHHHHHHHhhccccceeeEccC-CCccHHHHHHHHHHHHHhCCceeEEeechhH------HHHHccccc
Q psy471 58 HSPRLFQ-LLTKMKETAEAYLGHSVRDAVITVP-AYFNDAQRQATKDAGAIAGLNVMRIVNEPTA------AALAYGLDK 129 (211)
Q Consensus 58 ~~~~~a~-iL~~L~~~a~~~~g~~~~~vVItVP-a~f~~~qR~al~~Aa~~aGl~~~~lv~EP~A------AAl~y~~~~ 129 (211)
.||.+.. ++..|.+....+.+..+.-+.|+++ ..........++..+...|++...+++.... .+-.|++..
T Consensus 41 ~C~~C~~e~~~~l~~l~~~~~~~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~v~~ 120 (160)
T 3lor_A 41 LCPGCVNHGVPQAQKIHRMIDESQVQVIGLHSVFEHHDVMTPEALKVFIDEFGIKFPVAVDMPREGQRIPSTMKKYRLEG 120 (160)
T ss_dssp TCHHHHHTHHHHHHHHHHHSCTTTEEEEEEECCCSCGGGSCHHHHHHHHHHTTCCSCEEEECCCTTCSSCHHHHHTTCCS
T ss_pred CCcchhhhhhHHHHHHHHHhCcCCcEEEEEeccccccccCCHHHHHHHHHHcCCCCcEEECCccccchhhhHHHhcccCc
Confidence 4566777 5888888877665444544444443 1111234566677777788887666665554 566676543
Q ss_pred CCCCCceEEEeecCC
Q psy471 130 NLKGERNVKLPKMLE 144 (211)
Q Consensus 130 ~~~~~~~vLV~D~Gg 144 (211)
- -.++|+|=.|
T Consensus 121 ~----P~~~lid~~G 131 (160)
T 3lor_A 121 T----PSIILADRKG 131 (160)
T ss_dssp S----SEEEEECTTS
T ss_pred c----ceEEEECCCC
Confidence 2 2345555433
No 66
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=46.10 E-value=64 Score=22.32 Aligned_cols=81 Identities=12% Similarity=0.054 Sum_probs=47.7
Q ss_pred CchHHHHHHHHHHHHHHHhhccccceeeEccCCCccHHHHHHHHHHHHHhCCceeEEeechhHHHHHcccccCCCCCceE
Q psy471 58 HSPRLFQLLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYGLDKNLKGERNV 137 (211)
Q Consensus 58 ~~~~~a~iL~~L~~~a~~~~g~~~~~vVItVPa~f~~~qR~al~~Aa~~aGl~~~~lv~EP~AAAl~y~~~~~~~~~~~v 137 (211)
.||.+...+..|.+.+..+....+.-+.|++. -.......++..+...|++...+.+.....+-.|++..- -.+
T Consensus 45 ~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d--~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~----P~~ 118 (145)
T 3erw_A 45 WCPPCKKELPQFQSFYDAHPSDSVKLVTVNLV--NSEQNQQVVEDFIKANKLTFPIVLDSKGELMKEYHIITI----PTS 118 (145)
T ss_dssp SCHHHHHHHHHHHHHHHHCCCSSEEEEEEECG--GGSSCHHHHHHHHHHTTCCSCEEECSSSHHHHHTTCCEE----SEE
T ss_pred CCHHHHHHHHHHHHHHHHcCCCCEEEEEEEcc--CCcCCHHHHHHHHHHcCCceeEEEcCchhHHHhcCcCcc----CeE
Confidence 46777888888888877664344433334332 222245566666677788766566655556666765432 345
Q ss_pred EEeecCC
Q psy471 138 KLPKMLE 144 (211)
Q Consensus 138 LV~D~Gg 144 (211)
+|+|-.|
T Consensus 119 ~lid~~G 125 (145)
T 3erw_A 119 FLLNEKG 125 (145)
T ss_dssp EEECTTC
T ss_pred EEEcCCC
Confidence 6666544
No 67
>3o8m_A Hexokinase; rnaseh-like fold, glycolysis, glucose repression binding, MIG1 binding, transferase; HET: GLC BGC; 1.42A {Kluyveromyces lactis} PDB: 3o1b_A 3o08_A* 3o1w_A* 3o5b_A* 3o4w_A 3o80_A* 3o6w_A* 1ig8_A 3b8a_X*
Probab=44.36 E-value=42 Score=30.72 Aligned_cols=58 Identities=7% Similarity=-0.083 Sum_probs=43.9
Q ss_pred HHHHHHHHHHHHHhCCc--eeEEeechhHHHHHcccccCCCCCceEEEeecCCCceEEEEEecc
Q psy471 94 DAQRQATKDAGAIAGLN--VMRIVNEPTAAALAYGLDKNLKGERNVKLPKMLEPLLVLTLRKKK 155 (211)
Q Consensus 94 ~~qR~al~~Aa~~aGl~--~~~lv~EP~AAAl~y~~~~~~~~~~~vLV~D~GggT~Dvsv~~~~ 155 (211)
..-.+.|++|...-|++ ++.|+|+.+|++++..+.. ++.++-+=+|.|+--.-+.++.
T Consensus 185 ~dv~~~L~~al~r~gl~v~v~aivNDtv~tll~~~y~~----~~~~iglIlGTG~N~~y~e~~~ 244 (485)
T 3o8m_A 185 HDVVPMLQEQIEKLNIPINVVALINDTTGTLVASLYTD----PQTKMGIIIGTGVNGAYYDVVS 244 (485)
T ss_dssp SBHHHHHHHHHHHTTCCEEEEEEECHHHHHHHHHHHHC----TTEEEEEEESSSEEEEEEEEGG
T ss_pred ccHHHHHHHHHHhcCCCceEEEEEEcHHHHHHHHhhCC----CCcEEEEEEecCcceEEEeecc
Confidence 45667788888888876 4789999999999987663 4566667778887766666654
No 68
>2hyx_A Protein DIPZ; thioredoxin fold, jelly-roll, structural genomics, TB struct genomics consortium, TBSGC, unknown function; 1.90A {Mycobacterium tuberculosis}
Probab=41.90 E-value=1.1e+02 Score=26.37 Aligned_cols=83 Identities=11% Similarity=0.007 Sum_probs=49.2
Q ss_pred CchHHHHHHHHHHHHHHHhhccccceeeEccCCCccHHHHHHHHHHHHHhCCceeEEeechhHHHHHcccccCCCCCceE
Q psy471 58 HSPRLFQLLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYGLDKNLKGERNV 137 (211)
Q Consensus 58 ~~~~~a~iL~~L~~~a~~~~g~~~~~vVItVPa~f~~~qR~al~~Aa~~aGl~~~~lv~EP~AAAl~y~~~~~~~~~~~v 137 (211)
.||-+...+..|.+.+..+....+.=+.|+++.+-.......++..++..|++...+++.....+-.|++..- -.+
T Consensus 93 wC~~C~~~~p~L~~l~~~~~~~~v~vi~Vs~d~~~~~d~~~~~~~~~~~~~l~fpv~~D~~~~l~~~ygV~~~----Pt~ 168 (352)
T 2hyx_A 93 SCINCQRAIPHVVGWYQAYKDSGLAVIGVHTPEYAFEKVPGNVAKGAANLGISYPIALDNNYATWTNYRNRYW----PAE 168 (352)
T ss_dssp TCHHHHHHHHHHHHHHHHHGGGTEEEEEEECCSSGGGGCHHHHHHHHHHHTCCSCEEECTTSHHHHHTTCCEE----SEE
T ss_pred CChhHHHHHHHHHHHHHHhhcCCeEEEEEECCcccccCCHHHHHHHHHHcCCCccEEeCCcHHHHHHcCCCcc----CEE
Confidence 4666777888888887766544454455555543223344556666777788766555555556666765422 244
Q ss_pred EEeecCC
Q psy471 138 KLPKMLE 144 (211)
Q Consensus 138 LV~D~Gg 144 (211)
+|+|-.|
T Consensus 169 ~lID~~G 175 (352)
T 2hyx_A 169 YLIDATG 175 (352)
T ss_dssp EEECTTS
T ss_pred EEEeCCC
Confidence 5566543
No 69
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=41.12 E-value=1e+02 Score=22.38 Aligned_cols=81 Identities=9% Similarity=0.000 Sum_probs=46.6
Q ss_pred CchHHHHHHHHHHHHHHHhhccccceeeEccCCCccHHHHHHHHHHHHHhCCceeEEeechhHHHHHcccccCCCCCceE
Q psy471 58 HSPRLFQLLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYGLDKNLKGERNV 137 (211)
Q Consensus 58 ~~~~~a~iL~~L~~~a~~~~g~~~~~vVItVPa~f~~~qR~al~~Aa~~aGl~~~~lv~EP~AAAl~y~~~~~~~~~~~v 137 (211)
.||.+...+..|.+...++....+.=+.|++- ....++.-+...|++...+.+.....+-.|++......-..+
T Consensus 41 ~C~~C~~~~~~l~~~~~~~~~~~v~vv~vs~d------~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~~~~~P~~ 114 (161)
T 3drn_A 41 DTPGSTREASAFRDNWDLLKDYDVVVIGVSSD------DINSHKRFKEKYKLPFILVSDPDKKIRELYGAKGFILPARIT 114 (161)
T ss_dssp TCHHHHHHHHHHHHTHHHHHTTCEEEEEEESC------CHHHHHHHHHHTTCCSEEEECTTSHHHHHTTCCCSSSCCCEE
T ss_pred CCCchHHHHHHHHHHHHHHHHcCCEEEEEeCC------CHHHHHHHHHHhCCCceEEECCcHHHHHHcCCCCcCcccceE
Confidence 46667788888888877775544544444441 234556666677888665555445556667765311112345
Q ss_pred EEeecCC
Q psy471 138 KLPKMLE 144 (211)
Q Consensus 138 LV~D~Gg 144 (211)
+|+|=.|
T Consensus 115 ~lid~~G 121 (161)
T 3drn_A 115 FVIDKKG 121 (161)
T ss_dssp EEECTTS
T ss_pred EEECCCC
Confidence 5666443
No 70
>3djc_A Type III pantothenate kinase; structural genomics, putative transfera 2, protein structure initiative; 2.40A {Legionella pneumophila subsp}
Probab=39.63 E-value=41 Score=28.11 Aligned_cols=62 Identities=13% Similarity=0.105 Sum_probs=34.0
Q ss_pred ccceeeEccCCCccHHHHHHHHHHHHH-hCCceeEE-----------eech-------hHHHHHcccccCCCCCceEEEe
Q psy471 80 SVRDAVITVPAYFNDAQRQATKDAGAI-AGLNVMRI-----------VNEP-------TAAALAYGLDKNLKGERNVKLP 140 (211)
Q Consensus 80 ~~~~vVItVPa~f~~~qR~al~~Aa~~-aGl~~~~l-----------v~EP-------~AAAl~y~~~~~~~~~~~vLV~ 140 (211)
.+..++||.|. +.....++.++.. .+.+++.+ +..| .|+|++... .. ..+.++|+
T Consensus 57 ~I~~iiISSVv---p~~~~~l~~~~~~~~~~~~~~v~~~~~~g~~~~y~~P~~lG~DR~~~~vaA~~-~~--~~~~~iVV 130 (266)
T 3djc_A 57 TIRKIAICSVV---PQVDYSLRSACVKYFSIDPFLLQAGVKTGLNIKYRNPVEVGADRIANAIAATH-SF--PNQNIIVI 130 (266)
T ss_dssp GCCEEEEEESC---HHHHHHHHHHHHHHTCCCCEECCSSSCCCCEECCSSGGGSCHHHHHHHHHHHH-HS--TTSEEEEE
T ss_pred hceEEEEecch---HhHHHHHHHHHHHHcCCCeEEEcCCCCCCcccCCCChhhhHHHHHHHHHHHHH-hc--CCCCEEEE
Confidence 47788898887 4555566665553 35443211 2233 233332211 11 13589999
Q ss_pred ecCCCce
Q psy471 141 KMLEPLL 147 (211)
Q Consensus 141 D~GggT~ 147 (211)
|||..||
T Consensus 131 D~GTA~T 137 (266)
T 3djc_A 131 DFGTATT 137 (266)
T ss_dssp EESSEEE
T ss_pred ECCCeeE
Confidence 9987665
No 71
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=36.11 E-value=1.1e+02 Score=21.47 Aligned_cols=79 Identities=11% Similarity=0.129 Sum_probs=46.8
Q ss_pred CchHHHHHHHHHHHHHHHhhccccceeeEccCCCccHHHHHHHHHHHHHhCCceeEEeechhHHHHHcccccCCCCCceE
Q psy471 58 HSPRLFQLLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYGLDKNLKGERNV 137 (211)
Q Consensus 58 ~~~~~a~iL~~L~~~a~~~~g~~~~~vVItVPa~f~~~qR~al~~Aa~~aGl~~~~lv~EP~AAAl~y~~~~~~~~~~~v 137 (211)
.||.+...+..|.+.+..+.+..+.-+.|++-. .....++..+...|++...+.+.....+-.|++..- + .+
T Consensus 39 ~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~----~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~---P-~~ 110 (154)
T 3kcm_A 39 WCPPCREEIPSMMRLNAAMAGKPFRMLCVSIDE----GGKVAVEEFFRKTGFTLPVLLDADKRVGKLYGTTGV---P-ET 110 (154)
T ss_dssp TCHHHHHHHHHHHHHHHHTTTSSEEEEEEECCT----THHHHHHHHHHHHCCCCCEEECTTCHHHHHHTCCSB---C-EE
T ss_pred CCHHHHHHHHHHHHHHHHhccCCeEEEEEEcCC----cchHHHHHHHHHcCCCeeEEecCchHHHHHhCCCCC---C-eE
Confidence 467788888888888776655444444444432 235566666777788766555555545555665432 2 35
Q ss_pred EEeecCC
Q psy471 138 KLPKMLE 144 (211)
Q Consensus 138 LV~D~Gg 144 (211)
+|+|=.|
T Consensus 111 ~lid~~G 117 (154)
T 3kcm_A 111 FVIDRHG 117 (154)
T ss_dssp EEECTTS
T ss_pred EEECCCC
Confidence 5566444
No 72
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=36.02 E-value=1.1e+02 Score=21.50 Aligned_cols=77 Identities=10% Similarity=-0.029 Sum_probs=44.5
Q ss_pred CchHHHHHHHHHHHHHHHhhccccceeeEccCCCccHHHHHHHHHHHHHhCCceeEEee---chhHHHHHcccccCCCCC
Q psy471 58 HSPRLFQLLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVN---EPTAAALAYGLDKNLKGE 134 (211)
Q Consensus 58 ~~~~~a~iL~~L~~~a~~~~g~~~~~vVItVPa~f~~~qR~al~~Aa~~aGl~~~~lv~---EP~AAAl~y~~~~~~~~~ 134 (211)
.||.+...+..|.+.+..+ .+.-+.|++.. ......++..+...+++...+.. .....+-.|++.. -
T Consensus 41 ~C~~C~~~~~~l~~l~~~~---~v~~v~v~~d~---~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~~----~ 110 (154)
T 3ia1_A 41 WCTVCKAEFPGLHRVAEET---GVPFYVISREP---RDTREVVLEYMKTYPRFIPLLASDRDRPHEVAARFKVLG----Q 110 (154)
T ss_dssp TCHHHHHHHHHHHHHHHHH---CCCEEEEECCT---TCCHHHHHHHHTTCTTEEECBCCSSCCHHHHHTTSSBCS----S
T ss_pred cChhHHHHHHHHHHHHHHc---CCeEEEEeCCC---cccHHHHHHHHHHcCCCcccccccccchHHHHHHhCCCc----c
Confidence 4677888888888888777 44445566642 33455566666777876554444 2333333455432 2
Q ss_pred ceEEEeecCC
Q psy471 135 RNVKLPKMLE 144 (211)
Q Consensus 135 ~~vLV~D~Gg 144 (211)
-.++|+|-.|
T Consensus 111 P~~~lid~~G 120 (154)
T 3ia1_A 111 PWTFVVDREG 120 (154)
T ss_dssp CEEEEECTTS
T ss_pred cEEEEECCCC
Confidence 3456666443
No 73
>2iel_A Hypothetical protein TT0030; TT0030,thermus thermophilus, structural genomics, PSI, protein structure initiative; 1.60A {Thermus thermophilus} SCOP: c.26.2.4
Probab=35.99 E-value=73 Score=24.31 Aligned_cols=35 Identities=17% Similarity=0.211 Sum_probs=25.9
Q ss_pred ceeeEccCCCccHHHHHHHHHHHHHhCCceeEEee
Q psy471 82 RDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVN 116 (211)
Q Consensus 82 ~~vVItVPa~f~~~qR~al~~Aa~~aGl~~~~lv~ 116 (211)
.-+|+|.|.+.+..-+.-....|+..|++++.++.
T Consensus 101 eiIV~T~Ph~vs~~fh~DwasrAr~~gvPVlhl~a 135 (138)
T 2iel_A 101 GIVLSTLPPGLSRWLRLDVHTQAERFGLPVIHVIA 135 (138)
T ss_dssp EEEEEECCTTTCHHHHTTHHHHGGGGSSCEEEEEC
T ss_pred eEEEEcCCchHHHHHhccHHHHHHhcCCCEEEEee
Confidence 34789999999886655444445449999998884
No 74
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=35.05 E-value=1.2e+02 Score=21.48 Aligned_cols=83 Identities=11% Similarity=0.006 Sum_probs=47.4
Q ss_pred CchHHHHH-HHHHHHHHHHhhccccceeeEccCCC-ccHHHHHHHHHHHHHhCCceeEEeechh-----HHHHHcccccC
Q psy471 58 HSPRLFQL-LTKMKETAEAYLGHSVRDAVITVPAY-FNDAQRQATKDAGAIAGLNVMRIVNEPT-----AAALAYGLDKN 130 (211)
Q Consensus 58 ~~~~~a~i-L~~L~~~a~~~~g~~~~~vVItVPa~-f~~~qR~al~~Aa~~aGl~~~~lv~EP~-----AAAl~y~~~~~ 130 (211)
.||.+... +..|.+...++.+..+.=+.|+++.. ........++..+...|++...+++... ..+-.|++..-
T Consensus 39 wC~~C~~~~~~~l~~l~~~~~~~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~~ 118 (158)
T 3eyt_A 39 LCPGCVMHGIPLAQKVRAAFPEDKVAVLGLHTVFEHHEAMTPISLKAFLHEYRIKFPVGVDQPGDGAMPRTMAAYQMRGT 118 (158)
T ss_dssp TCHHHHHTHHHHHHHHHHHSCTTTEEEEEEECCCSCGGGSCHHHHHHHHHHTTCCSCEEEECCCSSSSCHHHHHTTCCSS
T ss_pred cCcchhhhhhHHHHHHHHHhCcCCEEEEEEEecccccccCCHHHHHHHHHHcCCCceEEEcCccchhhHHHHHHcCCCCC
Confidence 45667773 88888887766544454444444311 1133456667777788888765555544 35566765432
Q ss_pred CCCCceEEEeecCC
Q psy471 131 LKGERNVKLPKMLE 144 (211)
Q Consensus 131 ~~~~~~vLV~D~Gg 144 (211)
-.++|+|=.|
T Consensus 119 ----P~~~lid~~G 128 (158)
T 3eyt_A 119 ----PSLLLIDKAG 128 (158)
T ss_dssp ----SEEEEECTTS
T ss_pred ----CEEEEECCCC
Confidence 2455566443
No 75
>4htl_A Beta-glucoside kinase; structural genomics, sugar kinase, ROK family, PSI-biology, center for structural genomics, MCSG, transferase; HET: MSE; 1.64A {Listeria monocytogenes}
Probab=34.88 E-value=49 Score=27.34 Aligned_cols=39 Identities=18% Similarity=0.039 Sum_probs=27.6
Q ss_pred HhCCceeEEeechhHHHHHcccccCCCCCceEEEeecCCC
Q psy471 106 IAGLNVMRIVNEPTAAALAYGLDKNLKGERNVKLPKMLEP 145 (211)
Q Consensus 106 ~aGl~~~~lv~EP~AAAl~y~~~~~~~~~~~vLV~D~Ggg 145 (211)
..|++ +.+.|+..|||++-.+....+..++++++-+|.|
T Consensus 96 ~~~~p-V~v~NDa~aaal~E~~~g~~~~~~~~~~l~~GtG 134 (297)
T 4htl_A 96 ETGLP-VAIENDANCALLAEKWLGKGQDLDDFLCLTIGTG 134 (297)
T ss_dssp HHCSC-EEEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSS
T ss_pred HHCcC-EEEecHHHHHHHHHHHhCCCCCCCcEEEEEECcc
Confidence 45776 5599999999998654433334567778888776
No 76
>2h3g_X Biosynthetic protein; pantothenate kinase, anthrax, type III pantothenate kinase, COAX, COAA, askha; 2.00A {Bacillus anthracis str}
Probab=34.32 E-value=46 Score=27.74 Aligned_cols=61 Identities=8% Similarity=-0.032 Sum_probs=33.0
Q ss_pred ccceeeEccCCCccHHHHHHHHHHHHH-hCCceeEE-----------eech-------hHHHHHcccccCCCCCceEEEe
Q psy471 80 SVRDAVITVPAYFNDAQRQATKDAGAI-AGLNVMRI-----------VNEP-------TAAALAYGLDKNLKGERNVKLP 140 (211)
Q Consensus 80 ~~~~vVItVPa~f~~~qR~al~~Aa~~-aGl~~~~l-----------v~EP-------~AAAl~y~~~~~~~~~~~vLV~ 140 (211)
.+..++||.++ +.....++.++.. .+++++.+ +..| .++|++.... .++.++|+
T Consensus 56 ~i~~iiISSVv---p~~~~~l~~~~~~~~~~~~~~v~~~~~~gl~~~y~~P~~lG~DR~~~~vaA~~~----~~~~~iVV 128 (268)
T 2h3g_X 56 DVKGIIVSSVV---PPIMFALERMCEKYFKIKPLVVGPGIKTGLNIKYENPREVGADRIVNAVAGIHL----YGSPLIIV 128 (268)
T ss_dssp GCCEEEEEESC---HHHHHHHHHHHHHHTCCCCEECSTTCCCCCEECSSCGGGSCHHHHHHHHHHHHH----HCSSEEEE
T ss_pred cCcEEEEEccC---hhHHHHHHHHHHHHhCCCeEEEcCCCCCCccccCCChhhcCHHHHHHHHHHHHh----cCCCEEEE
Confidence 46778888775 5555556555544 45554322 2222 2233322111 13679999
Q ss_pred ecCCCce
Q psy471 141 KMLEPLL 147 (211)
Q Consensus 141 D~GggT~ 147 (211)
|||..||
T Consensus 129 D~GTAtT 135 (268)
T 2h3g_X 129 DFGTATT 135 (268)
T ss_dssp EESSEEE
T ss_pred ECCCceE
Confidence 9987665
No 77
>1srv_A Protein (groel (HSP60 class)); chaperone, cell division, ATP-binding, phosphorylation; 1.70A {Thermus thermophilus} SCOP: c.8.5.1
Probab=33.89 E-value=93 Score=23.90 Aligned_cols=32 Identities=28% Similarity=0.540 Sum_probs=25.5
Q ss_pred ccceeeEccCCCccHHHHHHHHHHHHHhCCcee
Q psy471 80 SVRDAVITVPAYFNDAQRQATKDAGAIAGLNVM 112 (211)
Q Consensus 80 ~~~~vVItVPa~f~~~qR~al~~Aa~~aGl~~~ 112 (211)
.+.-+.+..|. |.+.++..|.+.|...|..++
T Consensus 79 ~l~v~AVKAPg-fGd~Rk~~L~DiAilTGg~vi 110 (145)
T 1srv_A 79 TLSVAAVKAPG-FGDRRKEMLKDIAAVTGGTVI 110 (145)
T ss_dssp SCCEEEEECCS-SHHHHHHHHHHHHHHHTCCEE
T ss_pred cceEEEEeCCC-cchhhHHHHHHHHHHhCCEEE
Confidence 45556677775 889999999999999998765
No 78
>1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5
Probab=32.30 E-value=36 Score=28.04 Aligned_cols=39 Identities=5% Similarity=-0.072 Sum_probs=26.9
Q ss_pred eeEEeechhHHHHHcccccCCCCCceEEEeecCCCceEEEEEe
Q psy471 111 VMRIVNEPTAAALAYGLDKNLKGERNVKLPKMLEPLLVLTLRK 153 (211)
Q Consensus 111 ~~~lv~EP~AAAl~y~~~~~~~~~~~vLV~D~GggT~Dvsv~~ 153 (211)
...+++|++|.+.+..+..+ ..+ .|+|+||+++.+..++
T Consensus 76 ~~~~v~Ei~ah~~ga~~~~~--~~~--~vidiGGqd~k~i~~~ 114 (270)
T 1hux_A 76 ADKQMSELSCHAMGASFIWP--NVH--TVIDIGGQDVKVIHVE 114 (270)
T ss_dssp CSEEECHHHHHHHHHHHHCT--TCC--EEEEEETTEEEEEEEE
T ss_pred CCCCcccHHHHHHHHHHhCC--CCC--EEEEECCCceEEEEEe
Confidence 34579999998865433222 222 5899999999887774
No 79
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=31.52 E-value=1.3e+02 Score=20.98 Aligned_cols=78 Identities=10% Similarity=-0.008 Sum_probs=45.4
Q ss_pred CchHHHHHHHHHHHHHHHhhccccceeeEccCCCccHHHHHHHHHHHHHhCCceeEEeechhHHHHHcccccCCCCCceE
Q psy471 58 HSPRLFQLLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYGLDKNLKGERNV 137 (211)
Q Consensus 58 ~~~~~a~iL~~L~~~a~~~~g~~~~~vVItVPa~f~~~qR~al~~Aa~~aGl~~~~lv~EP~AAAl~y~~~~~~~~~~~v 137 (211)
.||.+...+..|.+.+..+....+.-+.|++... ...++......+++...+.+.....+-.|++.. --.+
T Consensus 39 ~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~-----~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~----~P~~ 109 (152)
T 3gl3_A 39 WCGPCRQSFPWMNQMQAKYKAKGFQVVAVNLDAK-----TGDAMKFLAQVPAEFTVAFDPKGQTPRLYGVKG----MPTS 109 (152)
T ss_dssp TCTHHHHHHHHHHHHHHHHGGGTEEEEEEECCSS-----HHHHHHHHHHSCCCSEEEECTTCHHHHHTTCCS----SSEE
T ss_pred cCHHHHHHHHHHHHHHHHhhcCCeEEEEEECCCC-----HHHHHHHHHHcCCCCceeECCcchhHHHcCCCC----CCeE
Confidence 4667778888888887776554444444544432 344555556677776655555445555566543 2345
Q ss_pred EEeecCC
Q psy471 138 KLPKMLE 144 (211)
Q Consensus 138 LV~D~Gg 144 (211)
+|+|-.|
T Consensus 110 ~lid~~G 116 (152)
T 3gl3_A 110 FLIDRNG 116 (152)
T ss_dssp EEECTTS
T ss_pred EEECCCC
Confidence 6666543
No 80
>3f9m_A Glucokinase; hexokinase IV, ATP-binding, diabetes mellitus, mutation, glycolysis, nucleotide-binding, transfera; HET: GLC MRK; 1.50A {Homo sapiens} PDB: 3fgu_A* 3id8_A* 3idh_A* 3vev_A* 3vf6_A* 3qic_A* 3s41_A* 4dhy_A* 4dch_A* 3vey_A* 1v4s_A* 3a0i_X* 3fr0_A* 3goi_A* 3imx_A* 3h1v_X* 1v4t_A*
Probab=31.51 E-value=29 Score=31.71 Aligned_cols=26 Identities=8% Similarity=-0.097 Sum_probs=21.4
Q ss_pred CCceEEEeecCCCceEEEEEeccchh
Q psy471 133 GERNVKLPKMLEPLLVLTLRKKKKKK 158 (211)
Q Consensus 133 ~~~~vLV~D~GggT~Dvsv~~~~~~~ 158 (211)
....+|.+|+||.+|=|.++++.+.+
T Consensus 75 E~G~fLAlDlGGTNfRV~~V~L~g~~ 100 (470)
T 3f9m_A 75 EVGDFLSLDLGGTNFRVMLVKVGEGE 100 (470)
T ss_dssp CCEEEEEEEESSSEEEEEEEEEEC--
T ss_pred cceEEEEEEecCceEEEEEEEECCCC
Confidence 34578999999999999999998754
No 81
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=31.27 E-value=1.4e+02 Score=21.01 Aligned_cols=78 Identities=12% Similarity=0.056 Sum_probs=45.6
Q ss_pred CchHHHHHHHHHHHHHHHhhccccceeeEccCCCccHHHHHHHHHHHHHhCCceeEEeechhHHHHHcccccCCCCCceE
Q psy471 58 HSPRLFQLLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYGLDKNLKGERNV 137 (211)
Q Consensus 58 ~~~~~a~iL~~L~~~a~~~~g~~~~~vVItVPa~f~~~qR~al~~Aa~~aGl~~~~lv~EP~AAAl~y~~~~~~~~~~~v 137 (211)
.||.+...+..|.+.+..+.+..+.-+.|++.. + ...++..+...|++...+++.....+-.|++.. --.+
T Consensus 37 ~C~~C~~~~~~l~~~~~~~~~~~v~vv~v~~d~--~---~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~----~P~~ 107 (151)
T 2f9s_A 37 WCEPCKKEFPYMANQYKHFKSQGVEIVAVNVGE--S---KIAVHNFMKSYGVNFPVVLDTDRQVLDAYDVSP----LPTT 107 (151)
T ss_dssp TCHHHHHHHHHHHHHHHHHGGGTEEEEEEEESC--C---HHHHHHHHHHHTCCSCEEEETTSHHHHHTTCCS----SCEE
T ss_pred CCHHHHHHHHHHHHHHHHhccCCeEEEEEECCC--C---HHHHHHHHHHcCCCceEEECCchHHHHhcCCCC----CCeE
Confidence 467777888888887776654344444444432 1 244555666678876656665555666676543 2345
Q ss_pred EEeecCC
Q psy471 138 KLPKMLE 144 (211)
Q Consensus 138 LV~D~Gg 144 (211)
+|+|=.|
T Consensus 108 ~lid~~G 114 (151)
T 2f9s_A 108 FLINPEG 114 (151)
T ss_dssp EEECTTS
T ss_pred EEECCCC
Confidence 6666443
No 82
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=31.20 E-value=1.3e+02 Score=20.75 Aligned_cols=75 Identities=13% Similarity=0.038 Sum_probs=40.2
Q ss_pred HHHHHHHHHHHHHHh-hccccceeeEccCCCccHHHHHHHHHHHHHhCCceeEEeec---hhHHHHHcccccCCCCCceE
Q psy471 62 LFQLLTKMKETAEAY-LGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNE---PTAAALAYGLDKNLKGERNV 137 (211)
Q Consensus 62 ~a~iL~~L~~~a~~~-~g~~~~~vVItVPa~f~~~qR~al~~Aa~~aGl~~~~lv~E---P~AAAl~y~~~~~~~~~~~v 137 (211)
+...+..|.+.+..+ .+..+.-+.|++.. .+..++..+...|++...+... ....+-.|++.. --.+
T Consensus 48 C~~~~~~l~~l~~~~~~~~~~~~v~v~~d~-----~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~~----~P~~ 118 (148)
T 3fkf_A 48 QPEANAELKRLNKEYKKNKNFAMLGISLDI-----DREAWETAIKKDTLSWDQVCDFTGLSSETAKQYAILT----LPTN 118 (148)
T ss_dssp CHHHHHHHHHHHHHTTTCTTEEEEEEECCS-----CHHHHHHHHHHTTCCSEEECCSCGGGCHHHHHTTCCS----SSEE
T ss_pred HHHHhHHHHHHHHHhcCCCCeEEEEEECCC-----CHHHHHHHHHHcCCCceEEEccCCcchHHHHhcCCCC----cCEE
Confidence 445556666666555 33334444454443 2455666667788876655443 234455566542 2345
Q ss_pred EEeecCCC
Q psy471 138 KLPKMLEP 145 (211)
Q Consensus 138 LV~D~Ggg 145 (211)
+|+|-.|-
T Consensus 119 ~lid~~G~ 126 (148)
T 3fkf_A 119 ILLSPTGK 126 (148)
T ss_dssp EEECTTSB
T ss_pred EEECCCCe
Confidence 66665553
No 83
>3mtq_A Putative phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS) permease...; PTS system fructose IIA component; 1.70A {Klebsiella pneumoniae subsp}
Probab=30.11 E-value=1e+02 Score=23.67 Aligned_cols=25 Identities=12% Similarity=0.078 Sum_probs=12.6
Q ss_pred HHHHHHHHHhhccccceeeEccCCC
Q psy471 67 TKMKETAEAYLGHSVRDAVITVPAY 91 (211)
Q Consensus 67 ~~L~~~a~~~~g~~~~~vVItVPa~ 91 (211)
+.+++.++..+|....-.+|+.|..
T Consensus 34 ~gl~~s~~~i~G~~~~v~av~~~~~ 58 (159)
T 3mtq_A 34 NGLLNSVELILGKQPDIHTLCAYVE 58 (159)
T ss_dssp HHHHHHHHHHHCCCTTEEEEEETSC
T ss_pred HHHHHHHHHHcCCCCCeEEEECCCC
Confidence 3455556666675433334555443
No 84
>3hm8_A Hexokinase-3; glucose, glucose-6-phosphate, non-protein kinase, structural genomics consortium, SGC, A enzyme, ATP-binding, glycolysis; HET: GLC BG6; 2.80A {Homo sapiens}
Probab=29.80 E-value=1e+02 Score=27.88 Aligned_cols=58 Identities=16% Similarity=0.101 Sum_probs=40.4
Q ss_pred HHHHHHHHHHHHHh---CCceeEEeechhHHHHHcccccCCCCCceEEEeecCCCceEEEEEecc
Q psy471 94 DAQRQATKDAGAIA---GLNVMRIVNEPTAAALAYGLDKNLKGERNVKLPKMLEPLLVLTLRKKK 155 (211)
Q Consensus 94 ~~qR~al~~Aa~~a---Gl~~~~lv~EP~AAAl~y~~~~~~~~~~~vLV~D~GggT~Dvsv~~~~ 155 (211)
..-.+.|++|...- .++++.|+|+.+|++++.++.. ++..+-+=+|.||--.-+.++.
T Consensus 160 ~dv~~lL~~al~r~~~~~v~vvAivNDTvgTLla~~y~~----~~~~iglIlGTGtNa~y~e~~~ 220 (445)
T 3hm8_A 160 QDVVSLLREAITRRQAVELNVVAIVNDTVGTMMSCGYED----PRCEIGLIVGTGTNACYMEELR 220 (445)
T ss_dssp SBHHHHHHHHHHHTTCSCCCSEEEECHHHHHHHHHHTTC----TTEEEEEEESSSEEEEEEEEGG
T ss_pred CcHHHHHHHHHHhcCCCCcceEEEecCcHHHHHhhccCC----CCceEEEEEeCCceEEEEEecc
Confidence 34566788888765 3578999999999999976653 3555666677777665555543
No 85
>3ixr_A Bacterioferritin comigratory protein; alpha beta protein, oxidoreductase; 1.60A {Xylella fastidiosa}
Probab=28.81 E-value=1.8e+02 Score=21.60 Aligned_cols=65 Identities=11% Similarity=0.051 Sum_probs=36.6
Q ss_pred chHHHHHHHHHHHHHHHhhccccceeeEccCCCccHHHHHHHHHHHHHhCCceeEEeechhHHHHHccccc
Q psy471 59 SPRLFQLLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYGLDK 129 (211)
Q Consensus 59 ~~~~a~iL~~L~~~a~~~~g~~~~~vVItVPa~f~~~qR~al~~Aa~~aGl~~~~lv~EP~AAAl~y~~~~ 129 (211)
||.+..-+..|.+....+....+. +|+|..- . ...++.-+...|++...+.+....++-.|++..
T Consensus 64 c~~C~~el~~l~~l~~~~~~~~~~--vv~Vs~D--~--~~~~~~~~~~~~~~f~~l~D~~~~~~~~~gv~~ 128 (179)
T 3ixr_A 64 TPGSSTEGLEFNLLLPQFEQINAT--VLGVSRD--S--VKSHDSFCAKQGFTFPLVSDSDAILCKAFDVIK 128 (179)
T ss_dssp SHHHHHHHHHHHHHHHHHHTTTEE--EEEEESC--C--HHHHHHHHHHHTCCSCEEECTTCHHHHHTTCEE
T ss_pred CCchHHHHHHHHHHHHHHHHCCCE--EEEEcCC--C--HHHHHHHHHHcCCceEEEECCchHHHHHcCCcc
Confidence 566777788888877766554454 4444332 1 222333444567776545544455666677653
No 86
>2pfu_A Biopolymer transport EXBD protein; TONB system, proton motive force, periplasmic domain; NMR {Escherichia coli}
Probab=28.77 E-value=67 Score=21.79 Aligned_cols=39 Identities=15% Similarity=0.043 Sum_probs=32.7
Q ss_pred cceeeEccCCCccHHHHHHHHHHHHHhCCceeEEeechh
Q psy471 81 VRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPT 119 (211)
Q Consensus 81 ~~~vVItVPa~f~~~qR~al~~Aa~~aGl~~~~lv~EP~ 119 (211)
-..++|..-..-....-..+.++++.+|+..+.|+.+|.
T Consensus 57 ~~~V~I~aD~~~~y~~vv~vmd~l~~aG~~~v~l~t~~~ 95 (99)
T 2pfu_A 57 DTTIFFRADKTVDYETLMKVMDTLHQAGYLKIGLVGEET 95 (99)
T ss_dssp SSCEEEEECTTCCHHHHHHHHHHHHHTCCCCEECTTCCC
T ss_pred CceEEEEcCCCCCHHHHHHHHHHHHHcCCCeEEEEecCc
Confidence 346888888888888888999999999999988887764
No 87
>3htv_A D-allose kinase, allokinase; NP_418508.1, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: MSE; 1.95A {Escherichia coli k-12}
Probab=28.15 E-value=1.6e+02 Score=24.47 Aligned_cols=39 Identities=3% Similarity=-0.144 Sum_probs=23.6
Q ss_pred HHhCCceeEEeechhHHHHHcccccCCCCCceEEEeecCCC
Q psy471 105 AIAGLNVMRIVNEPTAAALAYGLDKNLKGERNVKLPKMLEP 145 (211)
Q Consensus 105 ~~aGl~~~~lv~EP~AAAl~y~~~~~~~~~~~vLV~D~Ggg 145 (211)
+..|++ +.+.|+..|||++...... ...++++.+-+|.|
T Consensus 105 ~~~~~p-v~v~NDanaaa~~e~~~~~-~~~~~~~~v~~GtG 143 (310)
T 3htv_A 105 NTLNCP-VEFSRDVNLQLSWDVVENR-LTQQLVLAAYLGTG 143 (310)
T ss_dssp HHHTSC-EEEEEHHHHHHHHHHHHTT-CTTSCEEEEEESSS
T ss_pred HHhCCC-EEEeeHHHHHHHHHHhhcc-cCCceEEEEEecee
Confidence 345776 5599999999875432222 13455666666654
No 88
>3f9m_A Glucokinase; hexokinase IV, ATP-binding, diabetes mellitus, mutation, glycolysis, nucleotide-binding, transfera; HET: GLC MRK; 1.50A {Homo sapiens} PDB: 3fgu_A* 3id8_A* 3idh_A* 3vev_A* 3vf6_A* 3qic_A* 3s41_A* 4dhy_A* 4dch_A* 3vey_A* 1v4s_A* 3a0i_X* 3fr0_A* 3goi_A* 3imx_A* 3h1v_X* 1v4t_A*
Probab=27.98 E-value=1.2e+02 Score=27.64 Aligned_cols=57 Identities=12% Similarity=0.052 Sum_probs=41.2
Q ss_pred HHHHHHHHHHHHHhC---CceeEEeechhHHHHHcccccCCCCCceEEEeecCCCceEEEEEec
Q psy471 94 DAQRQATKDAGAIAG---LNVMRIVNEPTAAALAYGLDKNLKGERNVKLPKMLEPLLVLTLRKK 154 (211)
Q Consensus 94 ~~qR~al~~Aa~~aG---l~~~~lv~EP~AAAl~y~~~~~~~~~~~vLV~D~GggT~Dvsv~~~ 154 (211)
..-.+.|++|.+.-| ++++.|||+.+|..++.+... ++..+-+=+|.||--+-+.++
T Consensus 184 ~DVv~lL~~al~r~g~~~v~v~AlvNDTVgTL~s~aY~~----~~~~iGlI~GTGtNa~Y~E~~ 243 (470)
T 3f9m_A 184 NNVVGLLRDAIKRRGDFEMDVVAMVNDTVATMISCYYED----HQCEVGMIVGTGCNACYMEEM 243 (470)
T ss_dssp SBHHHHHHHHHHHHCSCCCEEEEEECHHHHHHHHHHTTC----TTEEEEEEESSSEEEEEEEEG
T ss_pred ccHHHHHHHHHHhcCCCCCcEEEEEEcCHHHHHhcccCC----CCceEEEEEecCCceEEeeec
Confidence 455678888888877 578999999999998876654 345555556888765555544
No 89
>4a57_A Nucleoside-triphosphatase 1; hydrolase; 2.00A {Toxoplasma gondii} PDB: 4a59_A* 4a5a_A* 4a5b_A 3agr_A
Probab=27.98 E-value=41 Score=31.68 Aligned_cols=19 Identities=0% Similarity=-0.109 Sum_probs=16.9
Q ss_pred CceEEEeecCCCceEEEEE
Q psy471 134 ERNVKLPKMLEPLLVLTLR 152 (211)
Q Consensus 134 ~~~vLV~D~GggT~Dvsv~ 152 (211)
..++-++||||+++.++..
T Consensus 246 ~~TvG~LDLGGASTQIaF~ 264 (611)
T 4a57_A 246 NDLAGVVEVGGASAQIVFP 264 (611)
T ss_dssp CCCCEEEEECSSCEEEEEE
T ss_pred CceeEEEeeCCceEEEEec
Confidence 4679999999999999974
No 90
>3o8m_A Hexokinase; rnaseh-like fold, glycolysis, glucose repression binding, MIG1 binding, transferase; HET: GLC BGC; 1.42A {Kluyveromyces lactis} PDB: 3o1b_A 3o08_A* 3o1w_A* 3o5b_A* 3o4w_A 3o80_A* 3o6w_A* 1ig8_A 3b8a_X*
Probab=27.81 E-value=35 Score=31.26 Aligned_cols=25 Identities=12% Similarity=-0.057 Sum_probs=21.8
Q ss_pred CCceEEEeecCCCceEEEEEeccch
Q psy471 133 GERNVKLPKMLEPLLVLTLRKKKKK 157 (211)
Q Consensus 133 ~~~~vLV~D~GggT~Dvsv~~~~~~ 157 (211)
....+|.+|+||.++-+.++.+.+.
T Consensus 78 E~G~~LalDlGGTn~Rv~~V~l~g~ 102 (485)
T 3o8m_A 78 ETGDFLALDLGGTNLRVVLVKLGGN 102 (485)
T ss_dssp CEEEEEEEEESSSEEEEEEEEEESS
T ss_pred cceEEEEEEecCCeEEEEEEEECCC
Confidence 3457899999999999999999875
No 91
>1ji0_A ABC transporter; ATP binding protein, structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; HET: ATP; 2.00A {Thermotoga maritima} SCOP: c.37.1.12
Probab=27.60 E-value=52 Score=26.51 Aligned_cols=34 Identities=12% Similarity=0.203 Sum_probs=27.1
Q ss_pred cCCCccHHHHHHHHHHHHHhCCceeEEeechhHH
Q psy471 88 VPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAA 121 (211)
Q Consensus 88 VPa~f~~~qR~al~~Aa~~aGl~~~~lv~EP~AA 121 (211)
-|..++.-||+.+.=|...+.-+.+-|++||+++
T Consensus 136 ~~~~LSgGq~qrv~lAraL~~~p~lllLDEPts~ 169 (240)
T 1ji0_A 136 LGGTLSGGEQQMLAIGRALMSRPKLLMMDEPSLG 169 (240)
T ss_dssp BSSSSCHHHHHHHHHHHHHTTCCSEEEEECTTTT
T ss_pred ChhhCCHHHHHHHHHHHHHHcCCCEEEEcCCccc
Confidence 3667788888888777777777788899999984
No 92
>2q2r_A Glucokinase 1, putative; ATPase hexose kinase family, transferase; HET: BGC ADP; 2.10A {Trypanosoma cruzi}
Probab=27.50 E-value=20 Score=30.86 Aligned_cols=18 Identities=17% Similarity=0.113 Sum_probs=14.6
Q ss_pred hCCceeEEeechhHHHHH
Q psy471 107 AGLNVMRIVNEPTAAALA 124 (211)
Q Consensus 107 aGl~~~~lv~EP~AAAl~ 124 (211)
.++..+.+.|+-.|+|++
T Consensus 127 ~~~~pv~v~NDa~aaalg 144 (373)
T 2q2r_A 127 FPPGHSAILNDLEAGGFG 144 (373)
T ss_dssp SCTTSEEEEEHHHHHHHH
T ss_pred cCCCCEEEEccHhHHhcc
Confidence 455457799999999998
No 93
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=27.26 E-value=1.7e+02 Score=20.87 Aligned_cols=82 Identities=9% Similarity=0.059 Sum_probs=46.1
Q ss_pred CchHHHHHHHHHHHHHHHhhccccceeeEccC-------------CCccHHHHHHHHHHHHHhCC-ceeEEeechhHHHH
Q psy471 58 HSPRLFQLLTKMKETAEAYLGHSVRDAVITVP-------------AYFNDAQRQATKDAGAIAGL-NVMRIVNEPTAAAL 123 (211)
Q Consensus 58 ~~~~~a~iL~~L~~~a~~~~g~~~~~vVItVP-------------a~f~~~qR~al~~Aa~~aGl-~~~~lv~EP~AAAl 123 (211)
.||.+...+..|.+....+- .+.=+.|++. .+-.......+++.+...|+ +...+.. ....+-
T Consensus 48 ~C~~C~~~~~~l~~l~~~~~--~v~vv~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d-~~~~~~ 124 (165)
T 3ha9_A 48 WCPSCVYMADLLDRLTEKYR--EISVIAIDFWTAEALKALGLNKPGYPPPDTPEMFRKFIANYGDPSWIMVMD-DGSLVE 124 (165)
T ss_dssp TCTTHHHHHHHHHHHHHHCT--TEEEEEEECCSHHHHHHHTCCSTTSCCCCCHHHHHHHHHHHSCTTSEEEEC-CSHHHH
T ss_pred CCcchhhhHHHHHHHHHHcC--CcEEEEEEecccccccccccccccCCCCCCHHHHHHHHHHcCCCCeeEEeC-hHHHHH
Confidence 45667777777777766553 3433334432 11112345566666777788 5555555 556666
Q ss_pred HcccccCCCCCceEEEeecCCCc
Q psy471 124 AYGLDKNLKGERNVKLPKMLEPL 146 (211)
Q Consensus 124 ~y~~~~~~~~~~~vLV~D~GggT 146 (211)
.|++..- -.++|+|=.|--
T Consensus 125 ~~~v~~~----P~~~lid~~G~i 143 (165)
T 3ha9_A 125 KFNVRSI----DYIVIMDKSSNV 143 (165)
T ss_dssp HTTCCSS----SEEEEEETTCCE
T ss_pred HhCCCCc----eEEEEEcCCCcE
Confidence 6765432 356677765543
No 94
>3hm8_A Hexokinase-3; glucose, glucose-6-phosphate, non-protein kinase, structural genomics consortium, SGC, A enzyme, ATP-binding, glycolysis; HET: GLC BG6; 2.80A {Homo sapiens}
Probab=26.83 E-value=41 Score=30.46 Aligned_cols=24 Identities=4% Similarity=-0.078 Sum_probs=20.8
Q ss_pred CCceEEEeecCCCceEEEEEeccc
Q psy471 133 GERNVKLPKMLEPLLVLTLRKKKK 156 (211)
Q Consensus 133 ~~~~vLV~D~GggT~Dvsv~~~~~ 156 (211)
....+|++|+||.++=+.++++.+
T Consensus 57 E~G~~LAlDlGGTn~RV~~V~l~g 80 (445)
T 3hm8_A 57 ERGDFLALDLGGTNFRVLLVRVTT 80 (445)
T ss_dssp CCEEEEEEEESSSSEEEEEEEESS
T ss_pred eeeEEEEEEecCCeEEEEEEEECC
Confidence 345789999999999999999865
No 95
>3uma_A Hypothetical peroxiredoxin protein; nysgrc, PSI biology, structural genomics, NEW YORK structura genomics research consortium; 2.20A {Sinorhizobium meliloti}
Probab=26.73 E-value=2.1e+02 Score=21.84 Aligned_cols=65 Identities=20% Similarity=0.177 Sum_probs=36.3
Q ss_pred chHHHH-HHHHHHHHHHHhhccccc-eeeEccCCCccHHHHHHHHHHHHHhCCc-eeEEeech-hHHHHHccccc
Q psy471 59 SPRLFQ-LLTKMKETAEAYLGHSVR-DAVITVPAYFNDAQRQATKDAGAIAGLN-VMRIVNEP-TAAALAYGLDK 129 (211)
Q Consensus 59 ~~~~a~-iL~~L~~~a~~~~g~~~~-~vVItVPa~f~~~qR~al~~Aa~~aGl~-~~~lv~EP-~AAAl~y~~~~ 129 (211)
||.+.. -+..|.+.+..+....+. =+.|++- +. ..++.-++..|++ ...++.+| ..++-.|++..
T Consensus 69 cp~C~~~e~p~l~~~~~~~~~~gv~~vv~Is~d---~~---~~~~~f~~~~~~~~~fp~l~D~~~~va~~yGv~~ 137 (184)
T 3uma_A 69 TPTCSLNHLPGYLENRDAILARGVDDIAVVAVN---DL---HVMGAWATHSGGMGKIHFLSDWNAAFTKAIGMEI 137 (184)
T ss_dssp CHHHHHTHHHHHHHTHHHHHTTTCCEEEEEESS---CH---HHHHHHHHHHTCTTTSEEEECTTCHHHHHTTCEE
T ss_pred CCCcCHHHHHHHHHHHHHHHHcCCCEEEEEECC---CH---HHHHHHHHHhCCCCceEEEEcCchHHHHHcCCce
Confidence 566777 577787777766554454 4445442 12 2233334456776 23455555 45667788764
No 96
>3j20_M 30S ribosomal protein S11P; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=26.58 E-value=2.1e+02 Score=21.60 Aligned_cols=57 Identities=26% Similarity=0.172 Sum_probs=31.7
Q ss_pred chHHHHHHHH-HHHHHHHhhccccceeeEccCCCc----cHHHHHHHHHHHHHhCCceeEEee
Q psy471 59 SPRLFQLLTK-MKETAEAYLGHSVRDAVITVPAYF----NDAQRQATKDAGAIAGLNVMRIVN 116 (211)
Q Consensus 59 ~~~~a~iL~~-L~~~a~~~~g~~~~~vVItVPa~f----~~~qR~al~~Aa~~aGl~~~~lv~ 116 (211)
+|+++++... +.+.+ ..+|...-++.|.-|... ...-|++...|...+|+++.+|-+
T Consensus 56 Tp~AA~~aa~~~~~~a-~e~Gi~~v~V~vkG~gg~~~~~pG~GresairaL~~~Gl~I~~I~D 117 (137)
T 3j20_M 56 SPYAAMLAARRAAEEA-LEKGIVGVHIRVRAPGGSKSKTPGPGAQAAIRALARAGLKIGRVED 117 (137)
T ss_dssp SHHHHHHHHHHHHHHH-HHHTEEEEEEEEECCCSSSCCSCCTHHHHHHHHHHHHTCEEEEEEE
T ss_pred CHHHHHHHHHHHHHHH-HHcCCeEEEEEEECCCCCCCcCCCCcHHHHHHHHHhCCCEEEEEEE
Confidence 3445544432 22223 234644455666665322 135677777777889999887755
No 97
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus}
Probab=26.54 E-value=1.9e+02 Score=21.25 Aligned_cols=83 Identities=14% Similarity=0.151 Sum_probs=45.7
Q ss_pred CchHHHHHHHHHHHHHHHhhccccceeeEccCCC--ccHHHHHHHHHHHHHhCCceeEEeechhHHHHHcccccCCCCCc
Q psy471 58 HSPRLFQLLTKMKETAEAYLGHSVRDAVITVPAY--FNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYGLDKNLKGER 135 (211)
Q Consensus 58 ~~~~~a~iL~~L~~~a~~~~g~~~~~vVItVPa~--f~~~qR~al~~Aa~~aGl~~~~lv~EP~AAAl~y~~~~~~~~~~ 135 (211)
.||.+...+..|.+....+....+.-+.|++-.. ........++..+...|++...+.+.....+-.|++... -
T Consensus 57 ~C~~C~~~~~~l~~l~~~~~~~~v~vv~v~~d~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~----P 132 (196)
T 2ywi_A 57 HCPFVKHVQHELVRLANDYMPKGVSFVAINSNDAEQYPEDSPENMKKVAEELGYPFPYLYDETQEVAKAYDAACT----P 132 (196)
T ss_dssp SCHHHHHHHHHHHHHHHHHGGGTCEEEEEECSCTTTCGGGSHHHHHHHHHHHTCCSCEEECSSCHHHHHHTCCEE----S
T ss_pred CCccHHHHHHHHHHHHHHHHhCCcEEEEEECCccccccccCHHHHHHHHHHcCCCceEEECCchHHHHHhCCCCC----C
Confidence 4677778888888887766544454444444221 111233455556666777766555555555556665432 2
Q ss_pred eEEEeecCC
Q psy471 136 NVKLPKMLE 144 (211)
Q Consensus 136 ~vLV~D~Gg 144 (211)
.++|+|=.|
T Consensus 133 ~~~lid~~G 141 (196)
T 2ywi_A 133 DFYIFDRDL 141 (196)
T ss_dssp EEEEEETTC
T ss_pred eEEEEcCCC
Confidence 345555433
No 98
>3lfh_A Manxa, phosphotransferase system, mannose/fructose-speci component IIA; PTS; 1.80A {Thermoanaerobacter tengcongensis} SCOP: c.54.1.0
Probab=26.31 E-value=2e+02 Score=21.37 Aligned_cols=39 Identities=13% Similarity=0.029 Sum_probs=20.4
Q ss_pred HHHHHHHHHhhccccceeeEccCCCccH-HHHHHHHHHHH
Q psy471 67 TKMKETAEAYLGHSVRDAVITVPAYFND-AQRQATKDAGA 105 (211)
Q Consensus 67 ~~L~~~a~~~~g~~~~~vVItVPa~f~~-~qR~al~~Aa~ 105 (211)
+.+++.++..+|....-.+++.|..-+. .-++.++++..
T Consensus 16 ~gl~~~~~~i~G~~~~v~av~~~~~~~~~~~~~~i~~~i~ 55 (144)
T 3lfh_A 16 KGLLSGAEVIIGKQENVHTVGLNLGDNIEVVRKEVEKIIK 55 (144)
T ss_dssp HHHHHHHHHHHCCCSSEEEEEECTTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCcEEEEEccCCCCHHHHHHHHHHHHH
Confidence 3455566666775444455666655443 33344444443
No 99
>4gp7_A Metallophosphoesterase; polynucleotide kinase phosphatase, RNA repair, transferase; HET: ATP CIT; 2.00A {Clostridium thermocellum} PDB: 4gp6_A*
Probab=26.13 E-value=2e+02 Score=21.25 Aligned_cols=41 Identities=15% Similarity=0.122 Sum_probs=24.7
Q ss_pred eEccCCCccHHHHHHHHHHHHHhCCceeEEeechhHHHHHc
Q psy471 85 VITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAY 125 (211)
Q Consensus 85 VItVPa~f~~~qR~al~~Aa~~aGl~~~~lv~EP~AAAl~y 125 (211)
++.-+...+..+|+.+.-|...+.-..+-+++||++++-..
T Consensus 77 ~~~~~~~~s~g~~qrv~iAral~~~p~~lllDEPt~~Ld~~ 117 (171)
T 4gp7_A 77 VVDATNVQESARKPLIEMAKDYHCFPVAVVFNLPEKVCQER 117 (171)
T ss_dssp EEESCCCSHHHHHHHHHHHHHTTCEEEEEEECCCHHHHHHH
T ss_pred EEECCCCCHHHHHHHHHHHHHcCCcEEEEEEeCCHHHHHHH
Confidence 34444444555566555444444445677999999987543
No 100
>3tif_A Uncharacterized ABC transporter ATP-binding prote; nucleotide-binding domain, ABC transporter ATPase; HET: ADP; 1.80A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID} PDB: 1l2t_A* 1f3o_A*
Probab=25.99 E-value=43 Score=26.94 Aligned_cols=34 Identities=26% Similarity=0.286 Sum_probs=26.7
Q ss_pred cCCCccHHHHHHHHHHHHHhCCceeEEeechhHH
Q psy471 88 VPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAA 121 (211)
Q Consensus 88 VPa~f~~~qR~al~~Aa~~aGl~~~~lv~EP~AA 121 (211)
-|..++.-||+.+.=|...+.-+.+-|++||+++
T Consensus 142 ~~~~LSgGq~QRv~iAral~~~p~llllDEPts~ 175 (235)
T 3tif_A 142 KPNQLSGGQQQRVAIARALANNPPIILADQPTWA 175 (235)
T ss_dssp CGGGSCHHHHHHHHHHHHHTTCCSEEEEESTTTT
T ss_pred ChhhCCHHHHHHHHHHHHHHcCCCEEEEeCCccc
Confidence 4667788888877777777777778899999985
No 101
>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreduc; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A
Probab=25.94 E-value=1.8e+02 Score=20.72 Aligned_cols=66 Identities=11% Similarity=0.090 Sum_probs=37.2
Q ss_pred CchHHHHHHHHHHHHHHHhhccccceeeEccCCCccHHHHHHHHHHHHHhCCceeEEeechhHHHHHccccc
Q psy471 58 HSPRLFQLLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYGLDK 129 (211)
Q Consensus 58 ~~~~~a~iL~~L~~~a~~~~g~~~~~vVItVPa~f~~~qR~al~~Aa~~aGl~~~~lv~EP~AAAl~y~~~~ 129 (211)
.||.+...+..|.+....+....+. +|+|..- ....++.-+...|++...+.+.....+-.|++..
T Consensus 47 ~c~~C~~~~~~l~~~~~~~~~~~~~--vv~vs~d----~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~ 112 (163)
T 3gkn_A 47 STPGATTEGLDFNALLPEFDKAGAK--ILGVSRD----SVKSHDNFCAKQGFAFPLVSDGDEALCRAFDVIK 112 (163)
T ss_dssp TSHHHHHHHHHHHHHHHHHHHTTCE--EEEEESS----CHHHHHHHHHHHCCSSCEEECTTCHHHHHTTCEE
T ss_pred CCCcHHHHHHHHHHHHHHHHHCCCE--EEEEeCC----CHHHHHHHHHHhCCCceEEECCcHHHHHHhCCcc
Confidence 3566777778887777666544444 3444432 2333344445567776645444445556676654
No 102
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=25.56 E-value=1.4e+02 Score=21.37 Aligned_cols=76 Identities=8% Similarity=0.045 Sum_probs=43.5
Q ss_pred CCchHHHHHHHHHHHHHHHhhccccceeeEccCCCccHHHHHHHHHHHHHhCCceeEEeechhHHHHHcccccCCCCCce
Q psy471 57 HHSPRLFQLLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYGLDKNLKGERN 136 (211)
Q Consensus 57 ~~~~~~a~iL~~L~~~a~~~~g~~~~~vVItVPa~f~~~qR~al~~Aa~~aGl~~~~lv~EP~AAAl~y~~~~~~~~~~~ 136 (211)
-.||.+...+..|.+.+..+-...+.-+.|++... ++......+++...+.+.....+-.|++..- -.
T Consensus 51 ~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~--------~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~----P~ 118 (158)
T 3hdc_A 51 SWCPYCRDEMPSMDRLVKSFPKGDLVVLAVNVEKR--------FPEKYRRAPVSFNFLSDATGQVQQRYGANRL----PD 118 (158)
T ss_dssp TTCHHHHHHHHHHHHHHHHSSTTSEEEEEEECSSS--------CCGGGGGCCCSCEEEECTTSHHHHHTTCCSS----SE
T ss_pred CcCHHHHHHHHHHHHHHHHcccCCeEEEEEeCCHH--------HHHHHHHcCCCceEEECchHHHHHHhCCCCc----ce
Confidence 34677788888888887766544555455555542 2233445577765455544555556665432 34
Q ss_pred EEEeecCC
Q psy471 137 VKLPKMLE 144 (211)
Q Consensus 137 vLV~D~Gg 144 (211)
++|+|=.|
T Consensus 119 ~~lid~~G 126 (158)
T 3hdc_A 119 TFIVDRKG 126 (158)
T ss_dssp EEEECTTS
T ss_pred EEEEcCCC
Confidence 55666544
No 103
>1bdg_A Hexokinase; phosphotransferase; HET: GLC; 2.60A {Schistosoma mansoni} SCOP: c.55.1.3 c.55.1.3
Probab=25.21 E-value=1.3e+02 Score=26.84 Aligned_cols=58 Identities=12% Similarity=0.051 Sum_probs=42.1
Q ss_pred cHHHHHHHHHHHHHhCCce--eEEeechhHHHHHcccccCCCCCceEEEeecCCCceEEEEEec
Q psy471 93 NDAQRQATKDAGAIAGLNV--MRIVNEPTAAALAYGLDKNLKGERNVKLPKMLEPLLVLTLRKK 154 (211)
Q Consensus 93 ~~~qR~al~~Aa~~aGl~~--~~lv~EP~AAAl~y~~~~~~~~~~~vLV~D~GggT~Dvsv~~~ 154 (211)
+..-++.|++|....|+++ +.|+|+.+|++++-++.. ++.++-+=+|.|+--.-+.+.
T Consensus 171 g~dv~~~L~~al~r~~l~v~v~al~NDtv~tlla~~y~~----~~~~iglIlGTG~na~yve~~ 230 (451)
T 1bdg_A 171 GHNVAELLQTELDKRELNVKCVAVVNDTVGTLASCALED----PKCAVGLIVGTGTNVAYIEDS 230 (451)
T ss_dssp TSBHHHHHHHHHHTTTCCEEEEEEECHHHHHHHHHHTTC----TTEEEEEEESSSEEEEEEEET
T ss_pred CCcHHHHHHHHHHHcCCCcceEEEEEchHHHHHHhcccC----CCcEEEEEEeCCcceEEEEcC
Confidence 3456778888887777763 589999999999877763 356666777888765555553
No 104
>1xvw_A Hypothetical protein RV2238C/MT2298; thioredoxin fold, oxidized cystein sulfenic acid, structural genomics, PSI; 1.90A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1xxu_A
Probab=25.19 E-value=1.8e+02 Score=20.64 Aligned_cols=80 Identities=13% Similarity=0.066 Sum_probs=42.5
Q ss_pred chHHHHHHHHHHHHHHHhhccccceeeEccCCCccHHHHHHHHHHHHHhCCceeEEeec--hhHHHHHcccccCC-CC-C
Q psy471 59 SPRLFQLLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNE--PTAAALAYGLDKNL-KG-E 134 (211)
Q Consensus 59 ~~~~a~iL~~L~~~a~~~~g~~~~~vVItVPa~f~~~qR~al~~Aa~~aGl~~~~lv~E--P~AAAl~y~~~~~~-~~-~ 134 (211)
||.+...+..|.+....+....+.-+.|++- + ...++.-+...|++...+.+. ....+-.|++.... .. .
T Consensus 49 C~~C~~~~~~l~~~~~~~~~~~~~vv~is~d---~---~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~v~~~~~~~p~ 122 (160)
T 1xvw_A 49 TGICQGELDQLRDHLPEFENDDSAALAISVG---P---PPTHKIWATQSGFTFPLLSDFWPHGAVSQAYGVFNEQAGIAN 122 (160)
T ss_dssp SSHHHHHHHHHHHTGGGTSSSSEEEEEEESC---C---HHHHHHHHHHHTCCSCEEECTTTTTHHHHHTTCEETTTTEEC
T ss_pred CCchHHHHHHHHHHHHHHHHCCcEEEEEeCC---C---HHHHHHHHHhcCCCceEEecCCcChHHHHHcCCccccCCCee
Confidence 5567777777777766554434444445442 1 234455555677766544443 44555667765321 11 1
Q ss_pred ceEEEeecCC
Q psy471 135 RNVKLPKMLE 144 (211)
Q Consensus 135 ~~vLV~D~Gg 144 (211)
..++|+|=.|
T Consensus 123 ~~~~lid~~G 132 (160)
T 1xvw_A 123 RGTFVVDRSG 132 (160)
T ss_dssp SEEEEECTTS
T ss_pred eeEEEECCCC
Confidence 2456666443
No 105
>3h78_A PQS biosynthetic enzyme; PQSD, anthranilic acid, anthraniloyl-COA, transferase; HET: BE2; 1.70A {Pseudomonas aeruginosa PAO1} PDB: 3h76_A 3h77_A*
Probab=24.75 E-value=1.7e+02 Score=24.99 Aligned_cols=58 Identities=12% Similarity=0.017 Sum_probs=35.0
Q ss_pred HHHHHHHHHHHhCCceeEEee------chhHH----HHHcccccCCCCCceEEEeecCCCceEE-EEEec
Q psy471 96 QRQATKDAGAIAGLNVMRIVN------EPTAA----ALAYGLDKNLKGERNVKLPKMLEPLLVL-TLRKK 154 (211)
Q Consensus 96 qR~al~~Aa~~aGl~~~~lv~------EP~AA----Al~y~~~~~~~~~~~vLV~D~GggT~Dv-sv~~~ 154 (211)
.++.+...++..|++.-++.. -..+| +|...+.. .+.++.+|++=||+|.+-- .|++.
T Consensus 283 n~~i~~~~~~~lgl~~ek~~~~l~~~GNt~sAsi~l~L~~~~~~-l~~Gd~vll~~fG~G~t~~~~ll~~ 351 (359)
T 3h78_A 283 NLRILDAVQEQLGIPQHKFAVTVDRLGNMASASTPVTLAMFWPD-IQPGQRVLVLTYGSGATWGAALYRK 351 (359)
T ss_dssp CHHHHHHHHHHHTCCGGGBCCCHHHHCBCGGGHHHHHHHHHGGG-SCTTCEEEEEEEETTTEEEEEEEEC
T ss_pred CHHHHHHHHHHhCcCHHHhhhhhhcccchHHHHHHHHHHHHHHh-CCCCCEEEEEEEchhhhheeeeEEe
Confidence 356677777888886544432 11222 23333333 4567889999999986555 45554
No 106
>3gfo_A Cobalt import ATP-binding protein CBIO 1; structural genomics, cell membrane, cobalt transport, hydrolase, ION transport; 2.30A {Clostridium perfringens atcc 13124}
Probab=24.39 E-value=47 Score=27.63 Aligned_cols=35 Identities=23% Similarity=0.242 Sum_probs=28.5
Q ss_pred ccCCCccHHHHHHHHHHHHHhCCceeEEeechhHH
Q psy471 87 TVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAA 121 (211)
Q Consensus 87 tVPa~f~~~qR~al~~Aa~~aGl~~~~lv~EP~AA 121 (211)
.-|..++.-||+.+.=|...+.-+.+-|++||+++
T Consensus 139 ~~~~~LSgGqkQRv~iAraL~~~P~lLlLDEPts~ 173 (275)
T 3gfo_A 139 KPTHCLSFGQKKRVAIAGVLVMEPKVLILDEPTAG 173 (275)
T ss_dssp SBGGGSCHHHHHHHHHHHHHTTCCSEEEEECTTTT
T ss_pred CCcccCCHHHHHHHHHHHHHHcCCCEEEEECcccc
Confidence 35667888888888888877877888899999985
No 107
>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken struc genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=24.35 E-value=2.1e+02 Score=20.96 Aligned_cols=82 Identities=20% Similarity=0.213 Sum_probs=46.0
Q ss_pred CchHHHHHHHHHHHHHHHhhccccceeeEccCCC--ccHHHHHHHHHHHHHhCCceeEEeechhHHHHHcccccCCCCCc
Q psy471 58 HSPRLFQLLTKMKETAEAYLGHSVRDAVITVPAY--FNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYGLDKNLKGER 135 (211)
Q Consensus 58 ~~~~~a~iL~~L~~~a~~~~g~~~~~vVItVPa~--f~~~qR~al~~Aa~~aGl~~~~lv~EP~AAAl~y~~~~~~~~~~ 135 (211)
.||.+...+..|.+....+.+. +.-+.|++... ........++..+...|++...+.+.....+-.|++... -
T Consensus 44 ~C~~C~~~~~~l~~l~~~~~~~-~~~v~v~~d~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~----P 118 (188)
T 2cvb_A 44 HCPYVKGSIGELVALAERYRGK-VAFVGINANDYEKYPEDAPEKMAAFAEEHGIFFPYLLDETQEVAKAYRALRT----P 118 (188)
T ss_dssp SCHHHHTTHHHHHHHHHHTTTT-EEEEEEECCCTTTCGGGSHHHHHHHHHHHTCCSCEEECSSSHHHHHTTCCEE----S
T ss_pred CCccHHHHHHHHHHHHHHhhcC-eEEEEEEcCccccccccCHHHHHHHHHHhCCCceEEECCcchHHHHcCCCCC----C
Confidence 5676777788888877766554 44444444221 111334455666667788766566555555666765432 2
Q ss_pred eEEEeecCC
Q psy471 136 NVKLPKMLE 144 (211)
Q Consensus 136 ~vLV~D~Gg 144 (211)
.++|+|=.|
T Consensus 119 ~~~lid~~G 127 (188)
T 2cvb_A 119 EVFLFDERR 127 (188)
T ss_dssp EEEEECTTC
T ss_pred eEEEECCCC
Confidence 445566443
No 108
>2pcj_A ABC transporter, lipoprotein-releasing system ATP-binding protein; structural genomics; 1.70A {Aquifex aeolicus} PDB: 2pcl_A
Probab=24.33 E-value=43 Score=26.67 Aligned_cols=35 Identities=23% Similarity=0.306 Sum_probs=27.6
Q ss_pred ccCCCccHHHHHHHHHHHHHhCCceeEEeechhHH
Q psy471 87 TVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAA 121 (211)
Q Consensus 87 tVPa~f~~~qR~al~~Aa~~aGl~~~~lv~EP~AA 121 (211)
.-|..++.-||+.+.-|...+.-+.+-|++||+++
T Consensus 136 ~~~~~LSgGq~qrv~laral~~~p~lllLDEPt~~ 170 (224)
T 2pcj_A 136 RKPYELSGGEQQRVAIARALANEPILLFADEPTGN 170 (224)
T ss_dssp CCGGGSCHHHHHHHHHHHHTTTCCSEEEEESTTTT
T ss_pred CChhhCCHHHHHHHHHHHHHHcCCCEEEEeCCCCC
Confidence 34667888888888777777777888899999984
No 109
>1bdg_A Hexokinase; phosphotransferase; HET: GLC; 2.60A {Schistosoma mansoni} SCOP: c.55.1.3 c.55.1.3
Probab=24.32 E-value=49 Score=29.75 Aligned_cols=23 Identities=4% Similarity=-0.216 Sum_probs=20.9
Q ss_pred CceEEEeecCCCceEEEEEeccc
Q psy471 134 ERNVKLPKMLEPLLVLTLRKKKK 156 (211)
Q Consensus 134 ~~~vLV~D~GggT~Dvsv~~~~~ 156 (211)
...+|.+|+||.++-+.++.+.+
T Consensus 67 ~G~~lalDlGGTn~Rv~~V~l~G 89 (451)
T 1bdg_A 67 TGNFLALDLGGTNYRVLSVTLEG 89 (451)
T ss_dssp CEEEEEEEESSSSEEEEEEEECC
T ss_pred cceEEEEEeCCCeEEEEEEecCC
Confidence 46789999999999999999987
No 110
>1zbs_A Hypothetical protein PG1100; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.30A {Porphyromonas gingivalis} SCOP: c.55.1.5 c.55.1.5
Probab=24.31 E-value=2.1e+02 Score=23.30 Aligned_cols=61 Identities=13% Similarity=0.008 Sum_probs=36.5
Q ss_pred ccceeeEccCCCccHHHHHHHHHHHH-HhCC-ceeEEeechhHHHHHcccccCCCCCceEEEeecCCCce
Q psy471 80 SVRDAVITVPAYFNDAQRQATKDAGA-IAGL-NVMRIVNEPTAAALAYGLDKNLKGERNVKLPKMLEPLL 147 (211)
Q Consensus 80 ~~~~vVItVPa~f~~~qR~al~~Aa~-~aGl-~~~~lv~EP~AAAl~y~~~~~~~~~~~vLV~D~GggT~ 147 (211)
.+..+.|++|..- ......+++... ..++ ..+.+.|+..+||++-. ..++.+++=+|.|.-
T Consensus 59 ~i~~igig~pG~~-~~~~~~l~~~l~~~~~~~~pv~v~NDa~~aa~ge~------g~~~~v~v~~GTGig 121 (291)
T 1zbs_A 59 SIRAVYFYGAGCT-PAKAPMLNEALDSMLPHCDRIEVAGDMLGAARALC------GDSEGIACILGTGSN 121 (291)
T ss_dssp TCCEEEEEETTCC-TTTHHHHHHHHHHHSTTCSEEEEECHHHHHHHHHT------TTSCEEEEEESSSEE
T ss_pred cccEEEEECCCCC-hHHHHHHHHHHHHhcCCCCcEEEeCcHHHHHHhhc------CCCCcEEEEecCChh
Confidence 4667899999875 222223333332 3454 46789999999998742 123344444676664
No 111
>3hp4_A GDSL-esterase; psychrotrophic, monoethylphosphonate, hydrolase; HET: MIR; 1.35A {Pseudoalteromonas SP} SCOP: c.23.10.0
Probab=24.21 E-value=2e+02 Score=20.76 Aligned_cols=34 Identities=9% Similarity=0.201 Sum_probs=21.2
Q ss_pred ceeeEcc--CCCccHH----HHHHHHHHHHHhCCceeEEe
Q psy471 82 RDAVITV--PAYFNDA----QRQATKDAGAIAGLNVMRIV 115 (211)
Q Consensus 82 ~~vVItV--Pa~f~~~----qR~al~~Aa~~aGl~~~~lv 115 (211)
.-+++++ |..|... -..++++.|...|+..+.+.
T Consensus 105 ~vvl~~~~~p~~~~~~~~~~~~~~~~~~a~~~~~~~vd~~ 144 (185)
T 3hp4_A 105 MTALMEIYIPPNYGPRYSKMFTSSFTQISEDTNAHLMNFF 144 (185)
T ss_dssp EEEEECCCCCSTTCHHHHHHHHHHHHHHHHHHCCEEECCT
T ss_pred eEEEEeCCCCCcccHHHHHHHHHHHHHHHHHcCCEEEcch
Confidence 3355654 7767653 34566777777787766553
No 112
>2o8r_A Polyphosphate kinase; structural genomics, protein structure initiative, PSI, nysgrc, NEW YORK structural genomics research consortium; HET: MSE; 2.70A {Porphyromonas gingivalis} SCOP: a.7.15.1 d.322.1.2 d.136.1.4 d.136.1.4
Probab=23.95 E-value=2.1e+02 Score=27.41 Aligned_cols=60 Identities=10% Similarity=-0.012 Sum_probs=40.9
Q ss_pred eeccccCCCchHHHHHHHHHHHHHHHhhccccceeeEccCCCccHHHHHHHHHHHHHhCCceeEEe
Q psy471 50 SFSPRCCHHSPRLFQLLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIV 115 (211)
Q Consensus 50 ~~speel~~~~~~a~iL~~L~~~a~~~~g~~~~~vVItVPa~f~~~qR~al~~Aa~~aGl~~~~lv 115 (211)
..+|..+ -..++..+..............+.|..|+.-+..-..+|..|+. +|+++--||
T Consensus 510 ~~sP~~~-----~~~i~~~i~~eI~~Ak~G~~a~I~ik~n~l~D~~ii~aL~~As~-~GV~V~LIV 569 (705)
T 2o8r_A 510 LVARYNM-----GEAITNLIEREIENVKRGKRGYMLLKMNGLQDKNVITQLYRASE-AGVEIDLIV 569 (705)
T ss_dssp EETTTTH-----HHHHHHHHHHHHHHHHTTCCCEEEEEESCBCCHHHHHHHHHHHH-TTCEEEEEE
T ss_pred EECCchH-----HHHHHHHHHHHHHHHhcCCCCEEEEEcCCCCCHHHHHHHHHHHH-CCCeEEEEE
Confidence 3466666 66677777666555444456788999997444555577777776 999887676
No 113
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=23.78 E-value=1e+02 Score=21.36 Aligned_cols=74 Identities=5% Similarity=-0.091 Sum_probs=37.1
Q ss_pred HHHHHHHHHHHHHHhhccccceeeEccCCCccHHHHHHHHHHHHHhCCceeEEeechhH---HHHHcccccCCCCCceEE
Q psy471 62 LFQLLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTA---AALAYGLDKNLKGERNVK 138 (211)
Q Consensus 62 ~a~iL~~L~~~a~~~~g~~~~~vVItVPa~f~~~qR~al~~Aa~~aGl~~~~lv~EP~A---AAl~y~~~~~~~~~~~vL 138 (211)
+...+..|.+....+....+.-+.|++.. ....++..+...|++...++.++.. .+-.|++.. --.++
T Consensus 46 C~~~~~~l~~l~~~~~~~~~~~v~v~~d~-----~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~i~~----~P~~~ 116 (148)
T 3hcz_A 46 CQQETPKLYDWWLKNRAKGIQVYAANIER-----KDEEWLKFIRSKKIGGWLNVRDSKNHTDFKITYDIYA----TPVLY 116 (148)
T ss_dssp TCSHHHHHHHHHHHHGGGTEEEEEEECCS-----SSHHHHHHHHHHTCTTSEEEECTTCCCCHHHHHCCCS----SCEEE
T ss_pred HHHHHHHHHHHHHHhccCCEEEEEEEecC-----CHHHHHHHHHHcCCCCceEEeccccchhHHHhcCcCC----CCEEE
Confidence 33445555555554433334333444331 2335666667778774445555544 455566543 23456
Q ss_pred EeecCC
Q psy471 139 LPKMLE 144 (211)
Q Consensus 139 V~D~Gg 144 (211)
|+|-.|
T Consensus 117 lid~~G 122 (148)
T 3hcz_A 117 VLDKNK 122 (148)
T ss_dssp EECTTC
T ss_pred EECCCC
Confidence 666544
No 114
>1vpl_A ABC transporter, ATP-binding protein; TM0544, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.10A {Thermotoga maritima} SCOP: c.37.1.12
Probab=23.58 E-value=50 Score=27.06 Aligned_cols=34 Identities=18% Similarity=0.154 Sum_probs=27.8
Q ss_pred cCCCccHHHHHHHHHHHHHhCCceeEEeechhHH
Q psy471 88 VPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAA 121 (211)
Q Consensus 88 VPa~f~~~qR~al~~Aa~~aGl~~~~lv~EP~AA 121 (211)
-|..++.-||+.+.-|...+.-+.+-|++||+++
T Consensus 143 ~~~~LSgGq~qRv~lAraL~~~p~lllLDEPts~ 176 (256)
T 1vpl_A 143 RVSTYSKGMVRKLLIARALMVNPRLAILDEPTSG 176 (256)
T ss_dssp BGGGCCHHHHHHHHHHHHHTTCCSEEEEESTTTT
T ss_pred ChhhCCHHHHHHHHHHHHHHcCCCEEEEeCCccc
Confidence 4667888888888888777887888899999984
No 115
>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}
Probab=23.53 E-value=1.9e+02 Score=20.09 Aligned_cols=75 Identities=11% Similarity=0.057 Sum_probs=42.0
Q ss_pred CchHHHHHHHHHHHHHHHhhccccceeeEccCCCccHHHHHHHHHHHHHhCCceeEEeech----hHHHHHcccccCCCC
Q psy471 58 HSPRLFQLLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEP----TAAALAYGLDKNLKG 133 (211)
Q Consensus 58 ~~~~~a~iL~~L~~~a~~~~g~~~~~vVItVPa~f~~~qR~al~~Aa~~aGl~~~~lv~EP----~AAAl~y~~~~~~~~ 133 (211)
.||.+...+..|.+....+....+.=+.|++-. .+..+++.+...|++...++..+ ...+-.|++...
T Consensus 43 wC~~C~~~~~~l~~l~~~~~~~~~~vv~vs~d~-----~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~~~--- 114 (143)
T 4fo5_A 43 YDAESRARNVQLANEVNKFGPDKIAMCSISMDE-----KESIFTETVKIDKLDLSTQFHEGLGKESELYKKYDLRKG--- 114 (143)
T ss_dssp TCHHHHHHHHHHHHHHTTSCTTTEEEEEEECCS-----CHHHHHHHHHHHTCCGGGEEECTTGGGSHHHHHTTGGGC---
T ss_pred cCHHHHHHHHHHHHHHHHhCcCCEEEEEEEccC-----CHHHHHHHHHHhCCCCceeeecccccchHHHHHcCCCCC---
Confidence 466677888888887766544444333444332 24566666777788762344444 345555766532
Q ss_pred CceEEEee
Q psy471 134 ERNVKLPK 141 (211)
Q Consensus 134 ~~~vLV~D 141 (211)
+ ..+|+|
T Consensus 115 P-~~~lid 121 (143)
T 4fo5_A 115 F-KNFLIN 121 (143)
T ss_dssp C-CEEEEC
T ss_pred C-cEEEEC
Confidence 2 345555
No 116
>3nkl_A UDP-D-quinovosamine 4-dehydrogenase; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Vibrio fischeri}
Probab=23.52 E-value=96 Score=22.02 Aligned_cols=39 Identities=13% Similarity=0.229 Sum_probs=28.6
Q ss_pred ccceeeEccCCCccHHHHHHHHHHHHHhCCceeEEeechhH
Q psy471 80 SVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTA 120 (211)
Q Consensus 80 ~~~~vVItVPa~f~~~qR~al~~Aa~~aGl~~~~lv~EP~A 120 (211)
.+..++|++|... ...++.+...+...|+++. +++....
T Consensus 65 ~id~viia~~~~~-~~~~~~i~~~l~~~gv~v~-~vP~~~~ 103 (141)
T 3nkl_A 65 CISTVLLAVPSAS-QVQKKVIIESLAKLHVEVL-TIPNLDD 103 (141)
T ss_dssp TCCEEEECCTTSC-HHHHHHHHHHHHTTTCEEE-ECCCHHH
T ss_pred CCCEEEEeCCCCC-HHHHHHHHHHHHHcCCeEE-ECCCHHH
Confidence 4678999999754 4577777888888998755 6665543
No 117
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=22.73 E-value=1.6e+02 Score=24.52 Aligned_cols=40 Identities=20% Similarity=0.302 Sum_probs=24.7
Q ss_pred cceeeEccCCCccHHHHHH---HHHHHHHhCCceeEEeechhHH
Q psy471 81 VRDAVITVPAYFNDAQRQA---TKDAGAIAGLNVMRIVNEPTAA 121 (211)
Q Consensus 81 ~~~vVItVPa~f~~~qR~a---l~~Aa~~aGl~~~~lv~EP~AA 121 (211)
...+.+..|.||.+.|... ++..|..++++++ +.|-|...
T Consensus 96 adavlv~~P~y~~~s~~~l~~~f~~ia~a~~lPii-lYn~P~~t 138 (292)
T 2vc6_A 96 ADGVLIVSPYYNKPTQEGIYQHFKAIDAASTIPII-VYNIPGRS 138 (292)
T ss_dssp CSEEEEECCCSSCCCHHHHHHHHHHHHHHCSSCEE-EEECHHHH
T ss_pred CCEEEEcCCCCCCCCHHHHHHHHHHHHHhCCCCEE-EEeCcccc
Confidence 5556666666665555543 3466777787766 88877643
No 118
>1g6h_A High-affinity branched-chain amino acid transport ATP-binding protein; beta-core domain; HET: ADP; 1.60A {Methanocaldococcus jannaschii} SCOP: c.37.1.12 PDB: 1gaj_A 1g9x_A*
Probab=22.58 E-value=53 Score=26.72 Aligned_cols=34 Identities=18% Similarity=0.180 Sum_probs=26.1
Q ss_pred cCCCccHHHHHHHHHHHHHhCCceeEEeechhHH
Q psy471 88 VPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAA 121 (211)
Q Consensus 88 VPa~f~~~qR~al~~Aa~~aGl~~~~lv~EP~AA 121 (211)
-|..++.-||+.+.-|...+.-+.+-|++||+++
T Consensus 150 ~~~~LSgGqkQrv~iAraL~~~p~lllLDEPts~ 183 (257)
T 1g6h_A 150 KAGELSGGQMKLVEIGRALMTNPKMIVMDEPIAG 183 (257)
T ss_dssp BGGGSCHHHHHHHHHHHHHHTCCSEEEEESTTTT
T ss_pred CchhCCHHHHHHHHHHHHHHcCCCEEEEeCCccC
Confidence 3566777787777777767777778899999984
No 119
>2cbz_A Multidrug resistance-associated protein 1; ABC proteins, MRP1/ABCC1, nucleotide-binding domain, ATP- binding, hydrolysis, transport; HET: ATP; 1.5A {Homo sapiens}
Probab=22.58 E-value=51 Score=26.55 Aligned_cols=34 Identities=18% Similarity=0.195 Sum_probs=25.9
Q ss_pred cCCCccHHHHHHHHHHHHHhCCceeEEeechhHH
Q psy471 88 VPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAA 121 (211)
Q Consensus 88 VPa~f~~~qR~al~~Aa~~aGl~~~~lv~EP~AA 121 (211)
-|..++.-||+.+.-|...+.-+.+-|++||+++
T Consensus 124 ~~~~LSgGqkqRv~lAraL~~~p~lllLDEPts~ 157 (237)
T 2cbz_A 124 KGVNLSGGQKQRVSLARAVYSNADIYLFDDPLSA 157 (237)
T ss_dssp TSBCCCHHHHHHHHHHHHHHHCCSEEEEESTTTT
T ss_pred CCCCCCHHHHHHHHHHHHHhcCCCEEEEeCcccc
Confidence 4567788888877777666766777799999974
No 120
>2yz2_A Putative ABC transporter ATP-binding protein TM_0; cobalt transport, TM02 hydrolase, inner membrane, membrane, nucleotide-binding; 2.30A {Thermotoga maritima}
Probab=22.53 E-value=54 Score=26.87 Aligned_cols=34 Identities=21% Similarity=0.356 Sum_probs=27.9
Q ss_pred cCCCccHHHHHHHHHHHHHhCCceeEEeechhHH
Q psy471 88 VPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAA 121 (211)
Q Consensus 88 VPa~f~~~qR~al~~Aa~~aGl~~~~lv~EP~AA 121 (211)
-|..++.-||+.+.=|...+.-+.+-|++||+++
T Consensus 135 ~~~~LSgGq~qRv~lAraL~~~p~lllLDEPts~ 168 (266)
T 2yz2_A 135 VPFFLSGGEKRRVAIASVIVHEPDILILDEPLVG 168 (266)
T ss_dssp CGGGSCHHHHHHHHHHHHHTTCCSEEEEESTTTT
T ss_pred ChhhCCHHHHHHHHHHHHHHcCCCEEEEcCcccc
Confidence 4567888888888888877888888899999984
No 121
>1sgw_A Putative ABC transporter; structural genomics, P protein structure initiative, southeast collaboratory for S genomics, secsg; 1.70A {Pyrococcus furiosus} SCOP: c.37.1.12
Probab=22.53 E-value=49 Score=26.39 Aligned_cols=34 Identities=9% Similarity=0.112 Sum_probs=27.2
Q ss_pred cCCCccHHHHHHHHHHHHHhCCceeEEeechhHH
Q psy471 88 VPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAA 121 (211)
Q Consensus 88 VPa~f~~~qR~al~~Aa~~aGl~~~~lv~EP~AA 121 (211)
-|..++.-||+.+.-|...+.-+.+-|++||+++
T Consensus 130 ~~~~LSgGqkqrv~laraL~~~p~lllLDEPts~ 163 (214)
T 1sgw_A 130 KLGELSQGTIRRVQLASTLLVNAEIYVLDDPVVA 163 (214)
T ss_dssp BGGGSCHHHHHHHHHHHHTTSCCSEEEEESTTTT
T ss_pred ChhhCCHHHHHHHHHHHHHHhCCCEEEEECCCcC
Confidence 3566788888888877777777788899999984
No 122
>2ixe_A Antigen peptide transporter 1; ABC ATPase, hydrolase; HET: ATP; 2.0A {Rattus norvegicus} PDB: 2ixg_A* 2ixf_A* 1jj7_A*
Probab=22.35 E-value=66 Score=26.51 Aligned_cols=35 Identities=26% Similarity=0.226 Sum_probs=28.1
Q ss_pred ccCCCccHHHHHHHHHHHHHhCCceeEEeechhHH
Q psy471 87 TVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAA 121 (211)
Q Consensus 87 tVPa~f~~~qR~al~~Aa~~aGl~~~~lv~EP~AA 121 (211)
.-|..++.-||+.+.-|...+.-+.+-|++||+++
T Consensus 152 ~~~~~LSgGq~QRv~lAraL~~~p~lllLDEPts~ 186 (271)
T 2ixe_A 152 ETGNQLSGGQRQAVALARALIRKPRLLILDNATSA 186 (271)
T ss_dssp GGGTTSCHHHHHHHHHHHHHTTCCSEEEEESTTTT
T ss_pred CCcCCCCHHHHHHHHHHHHHhcCCCEEEEECCccC
Confidence 44677888888888777777877888899999985
No 123
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=22.28 E-value=1.5e+02 Score=22.31 Aligned_cols=46 Identities=15% Similarity=0.018 Sum_probs=26.1
Q ss_pred HHHHHHHhhccccceeeEccCCCccHHHHHHHHHHHHHhCCceeEE
Q psy471 69 MKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRI 114 (211)
Q Consensus 69 L~~~a~~~~g~~~~~vVItVPa~f~~~qR~al~~Aa~~aGl~~~~l 114 (211)
|........+.+.+=++-++|.-..+.....+.......|++++.+
T Consensus 7 l~~~~~~~~~~~~~vlla~~~gd~HdiG~~~va~~l~~~G~eVi~l 52 (161)
T 2yxb_A 7 TRERVLGTPRRRYKVLVAKMGLDGHDRGAKVVARALRDAGFEVVYT 52 (161)
T ss_dssp ---------CCSCEEEEEEESSSSCCHHHHHHHHHHHHTTCEEECC
T ss_pred HHHHHHhhcCCCCEEEEEeCCCCccHHHHHHHHHHHHHCCCEEEEC
Confidence 3333333334444445555677777788888888888888888765
No 124
>2olj_A Amino acid ABC transporter; ABC domain, ATPase, hydrolase; HET: ADP; 2.05A {Geobacillus stearothermophilus} PDB: 2olk_A* 2ouk_A 2q0h_A* 3c4j_A* 3c41_J*
Probab=22.08 E-value=56 Score=26.92 Aligned_cols=35 Identities=29% Similarity=0.302 Sum_probs=27.8
Q ss_pred ccCCCccHHHHHHHHHHHHHhCCceeEEeechhHH
Q psy471 87 TVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAA 121 (211)
Q Consensus 87 tVPa~f~~~qR~al~~Aa~~aGl~~~~lv~EP~AA 121 (211)
.-|..++.-||+.+.-|...+.-+.+-|++||+++
T Consensus 155 ~~~~~LSgGqkQRv~lAraL~~~p~lllLDEPts~ 189 (263)
T 2olj_A 155 AYPDSLSGGQAQRVAIARALAMEPKIMLFDEPTSA 189 (263)
T ss_dssp SCGGGSCHHHHHHHHHHHHHTTCCSEEEEESTTTT
T ss_pred CChhhCCHHHHHHHHHHHHHHCCCCEEEEeCCccc
Confidence 34667888888888777777877888899999984
No 125
>2yhx_A Hexokinase B; transferase(phosphoryl,alcohol acceptr); HET: OTG; 2.10A {Saccharomyces cerevisiae} SCOP: i.12.1.1 PDB: 1hkg_A
Probab=21.98 E-value=57 Score=29.45 Aligned_cols=26 Identities=12% Similarity=-0.119 Sum_probs=21.6
Q ss_pred CCceEEEeecCCCceEEEEEeccchh
Q psy471 133 GERNVKLPKMLEPLLVLTLRKKKKKK 158 (211)
Q Consensus 133 ~~~~vLV~D~GggT~Dvsv~~~~~~~ 158 (211)
....++.+|+||.++-+.++...++.
T Consensus 59 E~G~~laiDlGGTnirv~lV~~~G~~ 84 (457)
T 2yhx_A 59 QAGSFLAIVMGGGDLEVILISLAGRQ 84 (457)
T ss_dssp CCEEEEEEEECSSEEEEEEEEEETTE
T ss_pred ccceEEEEEeCCCeEEEEEEEeCCCe
Confidence 45567999999999999999887643
No 126
>1b0u_A Histidine permease; ABC transporter, transport protein; HET: ATP; 1.50A {Salmonella typhimurium} SCOP: c.37.1.12
Probab=21.69 E-value=57 Score=26.71 Aligned_cols=35 Identities=29% Similarity=0.299 Sum_probs=27.4
Q ss_pred ccCCCccHHHHHHHHHHHHHhCCceeEEeechhHH
Q psy471 87 TVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAA 121 (211)
Q Consensus 87 tVPa~f~~~qR~al~~Aa~~aGl~~~~lv~EP~AA 121 (211)
.-|..++.-||+.+.-|...+.-+.+-|++||+++
T Consensus 149 ~~~~~LSgGq~qRv~lAraL~~~p~lllLDEPts~ 183 (262)
T 1b0u_A 149 KYPVHLSGGQQQRVSIARALAMEPDVLLFDEPTSA 183 (262)
T ss_dssp SCGGGSCHHHHHHHHHHHHHHTCCSEEEEESTTTT
T ss_pred CCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCCcc
Confidence 34667888888877777777777788899999984
No 127
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=21.52 E-value=2.2e+02 Score=20.04 Aligned_cols=81 Identities=12% Similarity=0.066 Sum_probs=44.0
Q ss_pred CchHHHHHHHHHHHHHHHhhccccceeeEccCCCccHHHHHHHHHHHHHhCCceeEEeechhHHHHHccccc--CCCCCc
Q psy471 58 HSPRLFQLLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYGLDK--NLKGER 135 (211)
Q Consensus 58 ~~~~~a~iL~~L~~~a~~~~g~~~~~vVItVPa~f~~~qR~al~~Aa~~aGl~~~~lv~EP~AAAl~y~~~~--~~~~~~ 135 (211)
.||.+...+..|.+.+..+-...+.-+.|++.. ....++.-+...|++...+.+.+ ..+-.|+... ....--
T Consensus 45 ~C~~C~~~~~~l~~l~~~~~~~~v~~v~v~~d~-----~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~P 118 (165)
T 3or5_A 45 WCPPCRSEIPDMVQVQKTWASRGFTFVGIAVNE-----QLPNVKNYMKTQGIIYPVMMATP-ELIRAFNGYIDGGITGIP 118 (165)
T ss_dssp TSHHHHHHHHHHHHHHHHHTTTTEEEEEEECSC-----CHHHHHHHHHHHTCCSCEEECCH-HHHHHHHTTSTTCSCSSS
T ss_pred cCHHHHHHHHHHHHHHHHhccCCeEEEEEECCC-----CHHHHHHHHHHcCCCCceEecCH-HHHHHHhhhhccCCCCCC
Confidence 467788888888888777655444444444442 23334445556677766555444 5555553221 112233
Q ss_pred eEEEeecCC
Q psy471 136 NVKLPKMLE 144 (211)
Q Consensus 136 ~vLV~D~Gg 144 (211)
.++|+|-.|
T Consensus 119 ~~~lid~~G 127 (165)
T 3or5_A 119 TSFVIDASG 127 (165)
T ss_dssp EEEEECTTS
T ss_pred eEEEECCCC
Confidence 556666544
No 128
>2pze_A Cystic fibrosis transmembrane conductance regulat; NBD, ABC transporter, CFTR, hydrolase; HET: ATP; 1.70A {Homo sapiens} PDB: 2pzg_A* 2pzf_A* 1ckx_A 1cky_A 1ckw_A 1ckz_A
Probab=21.43 E-value=80 Score=25.13 Aligned_cols=33 Identities=15% Similarity=0.097 Sum_probs=26.4
Q ss_pred CCCccHHHHHHHHHHHHHhCCceeEEeechhHH
Q psy471 89 PAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAA 121 (211)
Q Consensus 89 Pa~f~~~qR~al~~Aa~~aGl~~~~lv~EP~AA 121 (211)
+..++.-||+.+.-|...+.-+.+-|++||+++
T Consensus 128 ~~~LSgGqkqrv~lAral~~~p~lllLDEPts~ 160 (229)
T 2pze_A 128 GITLSGGQRARISLARAVYKDADLYLLDSPFGY 160 (229)
T ss_dssp CTTSCHHHHHHHHHHHHHHSCCSEEEEESTTTT
T ss_pred CCcCCHHHHHHHHHHHHHhcCCCEEEEECcccC
Confidence 457888888888777777777778899999974
No 129
>3osx_A 60 kDa chaperonin; alpha, beta, apical domain, chaperone; 1.55A {Xenorhabdus nematophila} SCOP: c.8.5.1 PDB: 1kid_A 1fy9_A 1la1_A 1fya_A 1jon_A 1dk7_A 1dkd_A
Probab=21.20 E-value=1.4e+02 Score=24.12 Aligned_cols=31 Identities=23% Similarity=0.450 Sum_probs=24.5
Q ss_pred cceeeEccCCCccHHHHHHHHHHHHHhCCcee
Q psy471 81 VRDAVITVPAYFNDAQRQATKDAGAIAGLNVM 112 (211)
Q Consensus 81 ~~~vVItVPa~f~~~qR~al~~Aa~~aGl~~~ 112 (211)
+.-|.|..|. |.+.++..|.+.|...|..++
T Consensus 93 l~v~AVKAPg-FGdrRk~~L~DIAilTGg~vi 123 (201)
T 3osx_A 93 VKVASVKAPG-FGDRRKAMLQDIATLTNGTVI 123 (201)
T ss_dssp CCEEEEECSS-CHHHHHHHHHHHHHHHTCCCB
T ss_pred EEEEEEeCCC-CccchhhhhHhHHHHhCCEEE
Confidence 4556677775 888889999999999998754
No 130
>3tui_C Methionine import ATP-binding protein METN; ABC-transporter, type I ABC type importer, methionine uptake transporter, membrane protein; HET: ADP; 2.90A {Escherichia coli} PDB: 3tuj_C 3tuz_C* 3dhw_C
Probab=20.97 E-value=69 Score=28.04 Aligned_cols=37 Identities=22% Similarity=0.233 Sum_probs=29.6
Q ss_pred EccCCCccHHHHHHHHHHHHHhCCceeEEeechhHHH
Q psy471 86 ITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAA 122 (211)
Q Consensus 86 ItVPa~f~~~qR~al~~Aa~~aGl~~~~lv~EP~AAA 122 (211)
=.-|..++.-||+.+.-|...+.-+.+-|++||+++.
T Consensus 158 ~~~~~~LSGGqkQRVaIArAL~~~P~lLLlDEPTs~L 194 (366)
T 3tui_C 158 DSYPSNLSGGQKQRVAIARALASNPKVLLCDQATSAL 194 (366)
T ss_dssp TCCTTTSCHHHHHHHHHHHHTTTCCSEEEEESTTTTS
T ss_pred cCChhhCCHHHHHHHHHHHHHhcCCCEEEEECCCccC
Confidence 3567888888888888777778778888999999853
No 131
>2pjz_A Hypothetical protein ST1066; ATP binding protein, structural genomics, NPPSFA; 1.90A {Sulfolobus tokodaii}
Probab=20.78 E-value=61 Score=26.71 Aligned_cols=35 Identities=14% Similarity=0.063 Sum_probs=27.7
Q ss_pred cCCCccHHHHHHHHHHHHHhCCceeEEeechhHHH
Q psy471 88 VPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAA 122 (211)
Q Consensus 88 VPa~f~~~qR~al~~Aa~~aGl~~~~lv~EP~AAA 122 (211)
-|..++.-||+.+.-|...+.-+.+-|++||+++.
T Consensus 125 ~~~~LSgGqkqRv~lAraL~~~p~lllLDEPts~L 159 (263)
T 2pjz_A 125 KLYKLSAGQSVLVRTSLALASQPEIVGLDEPFENV 159 (263)
T ss_dssp BGGGSCHHHHHHHHHHHHHHTCCSEEEEECTTTTC
T ss_pred ChhhCCHHHHHHHHHHHHHHhCCCEEEEECCcccc
Confidence 46678888888888777777777888999999843
No 132
>3m6c_A 60 kDa chaperonin 1; chaperone, ATP-binding, nucleotide-binding; 2.20A {Mycobacterium tuberculosis}
Probab=20.77 E-value=1.5e+02 Score=23.88 Aligned_cols=31 Identities=19% Similarity=0.415 Sum_probs=24.6
Q ss_pred cceeeEccCCCccHHHHHHHHHHHHHhCCcee
Q psy471 81 VRDAVITVPAYFNDAQRQATKDAGAIAGLNVM 112 (211)
Q Consensus 81 ~~~vVItVPa~f~~~qR~al~~Aa~~aGl~~~ 112 (211)
+.-|.+..|. |.+.++..|.+.|...|..++
T Consensus 86 l~v~AVKAPg-fGd~Rk~~L~DiAilTGg~vi 116 (194)
T 3m6c_A 86 LKAVAVKGPY-FGDRRKAFLEDLAVVTGGQVV 116 (194)
T ss_dssp SCEEEEECSS-CHHHHHHHHHHHHHHHTCCCB
T ss_pred EEEEEEECCC-CchhhhhhhHhHHHhcCCeEE
Confidence 4556677774 888999999999999998755
No 133
>2d2e_A SUFC protein; ABC-ATPase, SUF protein, 310-helix, riken structural genomics/proteomics initiative, RSGI, structural genomics, binding; 1.70A {Thermus thermophilus} PDB: 2d2f_A*
Probab=20.69 E-value=61 Score=26.24 Aligned_cols=34 Identities=6% Similarity=0.083 Sum_probs=21.5
Q ss_pred CCC-ccHHHHHHHHHHHHHhCCceeEEeechhHHH
Q psy471 89 PAY-FNDAQRQATKDAGAIAGLNVMRIVNEPTAAA 122 (211)
Q Consensus 89 Pa~-f~~~qR~al~~Aa~~aGl~~~~lv~EP~AAA 122 (211)
|.. ++.-||+.+.-|...+.-+.+-|++||+++.
T Consensus 140 ~~~~LSgGqkQrv~iAraL~~~p~lllLDEPts~L 174 (250)
T 2d2e_A 140 LNEGFSGGEKKRNEILQLLVLEPTYAVLDETDSGL 174 (250)
T ss_dssp TTCC----HHHHHHHHHHHHHCCSEEEEECGGGTT
T ss_pred cccCCCHHHHHHHHHHHHHHcCCCEEEEeCCCcCC
Confidence 455 7777777666666666667777999999853
No 134
>2nq2_C Hypothetical ABC transporter ATP-binding protein HI1470; putative iron chelatin ABC transporter, nucleotide binding domain; 2.40A {Haemophilus influenzae}
Probab=20.58 E-value=54 Score=26.76 Aligned_cols=34 Identities=32% Similarity=0.272 Sum_probs=27.3
Q ss_pred cCCCccHHHHHHHHHHHHHhCCceeEEeechhHH
Q psy471 88 VPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAA 121 (211)
Q Consensus 88 VPa~f~~~qR~al~~Aa~~aGl~~~~lv~EP~AA 121 (211)
-|..++.-||+.+.-|...+.-+.+-|++||+++
T Consensus 125 ~~~~LSgGq~qrv~lAraL~~~p~lllLDEPts~ 158 (253)
T 2nq2_C 125 EFTSLSGGQRQLILIARAIASECKLILLDEPTSA 158 (253)
T ss_dssp BGGGSCHHHHHHHHHHHHHHTTCSEEEESSSSTT
T ss_pred ChhhCCHHHHHHHHHHHHHHcCCCEEEEeCCccc
Confidence 3667888888888877777777888899999984
No 135
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=20.54 E-value=2.3e+02 Score=19.88 Aligned_cols=77 Identities=8% Similarity=-0.079 Sum_probs=39.9
Q ss_pred chHHHHHHHHHHHHHHHhhccccceeeEccCCCccHHHHHHHHHHHHHhCCceeEEeec---hhHHHHHcccccCCCCCc
Q psy471 59 SPRLFQLLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNE---PTAAALAYGLDKNLKGER 135 (211)
Q Consensus 59 ~~~~a~iL~~L~~~a~~~~g~~~~~vVItVPa~f~~~qR~al~~Aa~~aGl~~~~lv~E---P~AAAl~y~~~~~~~~~~ 135 (211)
||.+...+..|.+.+..+.+..+.=+.|++.. ....++..+...|++...+.+. ....+-.|++.. --
T Consensus 41 C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~-----~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~~----~P 111 (152)
T 2lrn_A 41 CSWCRKETPYLLKTYNAFKDKGFTIYGVSTDR-----REEDWKKAIEEDKSYWNQVLLQKDDVKDVLESYCIVG----FP 111 (152)
T ss_dssp CTTHHHHHHHHHHHHHHHTTTTEEEEEEECCS-----CHHHHHHHHHHHTCCSEEEEECHHHHHHHHHHTTCCS----SC
T ss_pred ChhHHHHHHHHHHHHHHhccCCeEEEEEEccC-----CHHHHHHHHHHhCCCCeEEecccchhHHHHHHhCCCc----CC
Confidence 44566667777776666544334434444332 2334455555667776544443 244455566542 23
Q ss_pred eEEEeecCC
Q psy471 136 NVKLPKMLE 144 (211)
Q Consensus 136 ~vLV~D~Gg 144 (211)
.++|+|=.|
T Consensus 112 ~~~lid~~G 120 (152)
T 2lrn_A 112 HIILVDPEG 120 (152)
T ss_dssp EEEEECTTS
T ss_pred eEEEECCCC
Confidence 456666443
No 136
>3mfq_A TROA, high-affinity zinc uptake system protein ZNUA; metal binding protein; 2.60A {Streptococcus suis} SCOP: c.92.2.0
Probab=20.23 E-value=1.2e+02 Score=25.18 Aligned_cols=48 Identities=13% Similarity=0.037 Sum_probs=30.2
Q ss_pred HHHHHHHHHHHHHHhhccccceeeEccCCCccHHHHHHHHHHHHHhCCceeEE
Q psy471 62 LFQLLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRI 114 (211)
Q Consensus 62 ~a~iL~~L~~~a~~~~g~~~~~vVItVPa~f~~~qR~al~~Aa~~aGl~~~~l 114 (211)
.+.-|+.|.+.++.. .+ .+++.- ..+++..-+.+.++|+..|++++.|
T Consensus 197 s~~~l~~l~~~ik~~---~v-~~if~e-~~~~~~~~~~l~~~a~~~g~~v~~l 244 (282)
T 3mfq_A 197 ANSDMIETVNLIIDH---NI-KAIFTE-STTNPERMKKLQEAVKAKGGQVEVV 244 (282)
T ss_dssp CHHHHHHHHHHHHHH---TC-CEEECB-TTSCTHHHHHHHHHHHTTSCCCEEE
T ss_pred CHHHHHHHHHHHHHc---CC-CEEEEe-CCCChHHHHHHHHHHHhcCCceEEe
Confidence 444445555554432 23 344544 4677888888888899999987753
Done!