BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy4716
(334 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3Q6M|A Chain A, Crystal Structure Of Human Mc-Hsp90 In C2221 Space Group
pdb|3Q6M|B Chain B, Crystal Structure Of Human Mc-Hsp90 In C2221 Space Group
pdb|3Q6M|C Chain C, Crystal Structure Of Human Mc-Hsp90 In C2221 Space Group
pdb|3Q6N|A Chain A, Crystal Structure Of Human Mc-Hsp90 In P21 Space Group
pdb|3Q6N|B Chain B, Crystal Structure Of Human Mc-Hsp90 In P21 Space Group
pdb|3Q6N|C Chain C, Crystal Structure Of Human Mc-Hsp90 In P21 Space Group
pdb|3Q6N|D Chain D, Crystal Structure Of Human Mc-Hsp90 In P21 Space Group
pdb|3Q6N|E Chain E, Crystal Structure Of Human Mc-Hsp90 In P21 Space Group
pdb|3Q6N|F Chain F, Crystal Structure Of Human Mc-Hsp90 In P21 Space Group
Length = 448
Score = 330 bits (847), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 167/253 (66%), Positives = 189/253 (74%), Gaps = 6/253 (2%)
Query: 85 YVARMKENQKQIYYITGETKDQVANSSFVERVKKRGFEVIYMTEPIDEYVVQQLKDYDGK 144
Y RMKENQK IYYITGETKDQVANS+FVER++K G EVIYM EPIDEY VQQLK+++GK
Sbjct: 190 YCTRMKENQKHIYYITGETKDQVANSAFVERLRKHGLEVIYMIEPIDEYCVQQLKEFEGK 249
Query: 145 TLVSVTXXXXXXXXXXXXXXXXXXXXXXXXNLCKVMKDILDKKVEKVIVSNRLVDSPCCI 204
TLVSVT NLCK+MKDIL+KKVEKV+VSNRLV SPCCI
Sbjct: 250 TLVSVTKEGLELPEDEEEKKKQEEKKTKFENLCKIMKDILEKKVEKVVVSNRLVTSPCCI 309
Query: 205 VTSQYGWTANMERIMKAQALRDTSTMGYMAAKKHLEINPDHSIVETLRQXXXXXXXXXXX 264
VTS YGWTANMERIMKAQALRD STMGYMAAKKHLEINPDHSI+ETLRQ
Sbjct: 310 VTSTYGWTANMERIMKAQALRDNSTMGYMAAKKHLEINPDHSIIETLRQKAEADKNDKSV 369
Query: 265 XXLVNLLFETSLLSSGFTLEEPQVHAARIHRMIKLGLGIEDEDEVATGDDVKAG---DIP 321
LV LL+ET+LLSSGF+LE+PQ HA RI+RMIKLGLGI+++D T DD A ++P
Sbjct: 370 KDLVILLYETALLSSGFSLEDPQTHANRIYRMIKLGLGIDEDD--PTADDTSAAVTEEMP 427
Query: 322 VAEGEAEDASRME 334
EG+ +D SRME
Sbjct: 428 PLEGD-DDTSRME 439
>pdb|3HJC|A Chain A, Crystal Structure Of The Carboxy-Terminal Domain Of Hsp90
From Leishmania Major, Lmjf33.0312
Length = 444
Score = 221 bits (562), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 107/220 (48%), Positives = 145/220 (65%)
Query: 85 YVARMKENQKQIYYITGETKDQVANSSFVERVKKRGFEVIYMTEPIDEYVVQQLKDYDGK 144
YV RMK QK IYYITG++K ++ S F+E+ ++RG EV++MTEPIDEYV+QQ+KD++ K
Sbjct: 206 YVTRMKAGQKSIYYITGDSKKKLETSPFIEQARRRGLEVLFMTEPIDEYVMQQVKDFEDK 265
Query: 145 TLVSVTXXXXXXXXXXXXXXXXXXXXXXXXNLCKVMKDILDKKVEKVIVSNRLVDSPCCI 204
+T LCK MK++L KVEKVIVS RL SPC +
Sbjct: 266 KFACLTKEGVHFEESEEEKQQREEEKAACEKLCKTMKEVLGDKVEKVIVSERLSTSPCIL 325
Query: 205 VTSQYGWTANMERIMKAQALRDTSTMGYMAAKKHLEINPDHSIVETLRQXXXXXXXXXXX 264
VTS++GW+A+ME+IM+ QALRD+S YM +KK +E+NP H I++ LR+
Sbjct: 326 VTSEFGWSAHMEQIMRNQALRDSSMAQYMMSKKTMELNPRHPIIKELRRRVGADENDKAV 385
Query: 265 XXLVNLLFETSLLSSGFTLEEPQVHAARIHRMIKLGLGIE 304
LV LLF+TSLL+SGF LE+P +A RI+RMIKLGL ++
Sbjct: 386 KDLVFLLFDTSLLTSGFQLEDPTGYAERINRMIKLGLSLD 425
>pdb|2CGE|A Chain A, Crystal Structure Of An Hsp90-Sba1 Closed Chaperone
Complex
pdb|2CGE|B Chain B, Crystal Structure Of An Hsp90-Sba1 Closed Chaperone
Complex
pdb|2CGE|D Chain D, Crystal Structure Of An Hsp90-Sba1 Closed Chaperone
Complex
Length = 405
Score = 187 bits (474), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 100/219 (45%), Positives = 139/219 (63%), Gaps = 2/219 (0%)
Query: 85 YVARMKENQKQIYYITGETKDQVANSSFVERVKKRGFEVIYMTEPIDEYVVQQLKDYDGK 144
YV RM E+QK IYYITGE+ V S F++ +K + FEV+++T+PIDEY QLK+++GK
Sbjct: 188 YVTRMPEHQKNIYYITGESLKAVEKSPFLDALKAKNFEVLFLTDPIDEYAFTQLKEFEGK 247
Query: 145 TLVSVTXXXXXXXXXXXXXXXXXXXXXXXXNLCKVMKDILDKKVEKVIVSNRLVDSPCCI 204
TLV +T L K +K+IL +VEKV+VS +L+D+P I
Sbjct: 248 TLVDITKDFELEETDEEKAEREKEIKEYEP-LTKALKEILGDQVEKVVVSYKLLDAPAAI 306
Query: 205 VTSQYGWTANMERIMKAQALRDTSTMGYMAAKKHLEINPDHSIVETLRQXXXX-XXXXXX 263
T Q+GW+ANMERIMKAQALRD+S YM++KK EI+P I++ L++
Sbjct: 307 RTGQFGWSANMERIMKAQALRDSSMSSYMSSKKTFEISPKSPIIKELKKRVDEGGAQDKT 366
Query: 264 XXXLVNLLFETSLLSSGFTLEEPQVHAARIHRMIKLGLG 302
L LL+ET+LL+SGF+L+EP A+RI+R+I LGL
Sbjct: 367 VKDLTKLLYETALLTSGFSLDEPTSFASRINRLISLGLN 405
>pdb|2CG9|A Chain A, Crystal Structure Of An Hsp90-Sba1 Closed Chaperone
Complex
pdb|2CG9|B Chain B, Crystal Structure Of An Hsp90-Sba1 Closed Chaperone
Complex
Length = 677
Score = 186 bits (473), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 100/219 (45%), Positives = 139/219 (63%), Gaps = 2/219 (0%)
Query: 85 YVARMKENQKQIYYITGETKDQVANSSFVERVKKRGFEVIYMTEPIDEYVVQQLKDYDGK 144
YV RM E+QK IYYITGE+ V S F++ +K + FEV+++T+PIDEY QLK+++GK
Sbjct: 460 YVTRMPEHQKNIYYITGESLKAVEKSPFLDALKAKNFEVLFLTDPIDEYAFTQLKEFEGK 519
Query: 145 TLVSVTXXXXXXXXXXXXXXXXXXXXXXXXNLCKVMKDILDKKVEKVIVSNRLVDSPCCI 204
TLV +T L K +K+IL +VEKV+VS +L+D+P I
Sbjct: 520 TLVDITKDFELEETDEEKAEREKEIKEYEP-LTKALKEILGDQVEKVVVSYKLLDAPAAI 578
Query: 205 VTSQYGWTANMERIMKAQALRDTSTMGYMAAKKHLEINPDHSIVETLRQXXXX-XXXXXX 263
T Q+GW+ANMERIMKAQALRD+S YM++KK EI+P I++ L++
Sbjct: 579 RTGQFGWSANMERIMKAQALRDSSMSSYMSSKKTFEISPKSPIIKELKKRVDEGGAQDKT 638
Query: 264 XXXLVNLLFETSLLSSGFTLEEPQVHAARIHRMIKLGLG 302
L LL+ET+LL+SGF+L+EP A+RI+R+I LGL
Sbjct: 639 VKDLTKLLYETALLTSGFSLDEPTSFASRINRLISLGLN 677
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 31/47 (65%), Positives = 38/47 (80%), Gaps = 1/47 (2%)
Query: 3 GFYSAYLVADKVTVTSKHNDDEQYIWESSAGGSFTIKPDN-SQPLGR 48
GFYS +LVAD+V V SK NDDEQYIWES+AGGSFT+ D ++ +GR
Sbjct: 123 GFYSLFLVADRVQVISKSNDDEQYIWESNAGGSFTVTLDEVNERIGR 169
>pdb|2O1T|A Chain A, Structure Of Middle Plus C-Terminal Domains (M+c) Of Grp94
pdb|2O1T|B Chain B, Structure Of Middle Plus C-Terminal Domains (M+c) Of Grp94
pdb|2O1T|C Chain C, Structure Of Middle Plus C-Terminal Domains (M+c) Of Grp94
pdb|2O1T|D Chain D, Structure Of Middle Plus C-Terminal Domains (M+c) Of Grp94
pdb|2O1T|E Chain E, Structure Of Middle Plus C-Terminal Domains (M+c) Of Grp94
pdb|2O1T|F Chain F, Structure Of Middle Plus C-Terminal Domains (M+c) Of Grp94
pdb|2O1T|G Chain G, Structure Of Middle Plus C-Terminal Domains (M+c) Of Grp94
pdb|2O1T|H Chain H, Structure Of Middle Plus C-Terminal Domains (M+c) Of Grp94
pdb|2O1T|I Chain I, Structure Of Middle Plus C-Terminal Domains (M+c) Of Grp94
pdb|2O1T|J Chain J, Structure Of Middle Plus C-Terminal Domains (M+c) Of Grp94
Length = 450
Score = 179 bits (453), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 92/229 (40%), Positives = 131/229 (57%), Gaps = 4/229 (1%)
Query: 85 YVARMKENQKQIYYITGETKDQVANSSFVERVKKRGFEVIYMTEPIDEYVVQQLKDYDGK 144
YV RMKE Q +IY++ G ++ + +S FVER+ K+G+EVIY+TEP+DEY +Q L ++DGK
Sbjct: 212 YVERMKEKQDKIYFMAGSSRKEAESSPFVERLLKKGYEVIYLTEPVDEYCIQALPEFDGK 271
Query: 145 TLVSVTXXXXXXXXXXXXXXXXXXXXXXXXNLCKVMKD-ILDKKVEKVIVSNRLVDSPCC 203
+V L MKD L K+EK +VS RL +SPC
Sbjct: 272 RFQNVAKEGVKFDESEKTKESREAIEKEFEPLLNWMKDKALKDKIEKAVVSQRLTESPCA 331
Query: 204 IVTSQYGWTANMERIMKAQAL---RDTSTMGYMAAKKHLEINPDHSIVETLRQXXXXXXX 260
+V SQYGW+ NMERIMKAQA +D ST Y + KK EINP H +++ + +
Sbjct: 332 LVASQYGWSGNMERIMKAQAYQTGKDISTNYYASQKKTFEINPRHPLIKDMLRRVKEDED 391
Query: 261 XXXXXXLVNLLFETSLLSSGFTLEEPQVHAARIHRMIKLGLGIEDEDEV 309
L +LFET+ L SG+ L + + + RI RM++L L I+ + +V
Sbjct: 392 DKTVSDLAVVLFETATLRSGYLLPDTKAYGDRIERMLRLSLNIDPDAKV 440
>pdb|2O1U|A Chain A, Structure Of Full Length Grp94 With Amp-Pnp Bound
pdb|2O1U|B Chain B, Structure Of Full Length Grp94 With Amp-Pnp Bound
pdb|2O1V|A Chain A, Structure Of Full Length Grp94 With Adp Bound
pdb|2O1V|B Chain B, Structure Of Full Length Grp94 With Adp Bound
Length = 666
Score = 177 bits (450), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 91/224 (40%), Positives = 128/224 (57%), Gaps = 4/224 (1%)
Query: 85 YVARMKENQKQIYYITGETKDQVANSSFVERVKKRGFEVIYMTEPIDEYVVQQLKDYDGK 144
YV RMKE Q +IY++ G ++ + +S FVER+ K+G+EVIY+TEP+DEY +Q L ++DGK
Sbjct: 439 YVERMKEKQDKIYFMAGSSRKEAESSPFVERLLKKGYEVIYLTEPVDEYCIQALPEFDGK 498
Query: 145 TLVSVTXXXXXXXXXXXXXXXXXXXXXXXXNLCKVMKD-ILDKKVEKVIVSNRLVDSPCC 203
+V L MKD L K+EK +VS RL +SPC
Sbjct: 499 RFQNVAKEGVKFDESEKTKESREAIEKEFEPLLNWMKDKALKDKIEKAVVSQRLTESPCA 558
Query: 204 IVTSQYGWTANMERIMKAQAL---RDTSTMGYMAAKKHLEINPDHSIVETLRQXXXXXXX 260
+V SQYGW+ NMERIMKAQA +D ST Y + KK EINP H +++ + +
Sbjct: 559 LVASQYGWSGNMERIMKAQAYQTGKDISTNYYASQKKTFEINPRHPLIKDMLRRVKEDED 618
Query: 261 XXXXXXLVNLLFETSLLSSGFTLEEPQVHAARIHRMIKLGLGIE 304
L +LFET+ L SG+ L + + + RI RM++L L I+
Sbjct: 619 DKTVSDLAVVLFETATLRSGYLLPDTKAYGDRIERMLRLSLNID 662
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/46 (58%), Positives = 31/46 (67%)
Query: 3 GFYSAYLVADKVTVTSKHNDDEQYIWESSAGGSFTIKPDNSQPLGR 48
GFYSA+LVADKV VTSKHN+D Q+IWES + I LGR
Sbjct: 147 GFYSAFLVADKVIVTSKHNNDTQHIWESDSNEFSVIADPRGNTLGR 192
>pdb|3PRY|A Chain A, Crystal Structure Of The Middle Domain Of Human Hsp90-Beta
Refined At 2.3 A Resolution
pdb|3PRY|B Chain B, Crystal Structure Of The Middle Domain Of Human Hsp90-Beta
Refined At 2.3 A Resolution
pdb|3PRY|C Chain C, Crystal Structure Of The Middle Domain Of Human Hsp90-Beta
Refined At 2.3 A Resolution
Length = 268
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 54/66 (81%), Positives = 63/66 (95%)
Query: 85 YVARMKENQKQIYYITGETKDQVANSSFVERVKKRGFEVIYMTEPIDEYVVQQLKDYDGK 144
YV+RMKE QK IYYITGE+K+QVANS+FVERV+KRGFEV+YMTEPIDEY VQQLK++DGK
Sbjct: 190 YVSRMKETQKSIYYITGESKEQVANSAFVERVRKRGFEVVYMTEPIDEYCVQQLKEFDGK 249
Query: 145 TLVSVT 150
+LVSVT
Sbjct: 250 SLVSVT 255
>pdb|2IOP|A Chain A, Crystal Structure Of Full-Length Htpg, The Escherichia
Coli Hsp90, Bound To Adp
pdb|2IOP|B Chain B, Crystal Structure Of Full-Length Htpg, The Escherichia
Coli Hsp90, Bound To Adp
pdb|2IOP|C Chain C, Crystal Structure Of Full-Length Htpg, The Escherichia
Coli Hsp90, Bound To Adp
pdb|2IOP|D Chain D, Crystal Structure Of Full-Length Htpg, The Escherichia
Coli Hsp90, Bound To Adp
pdb|2IOQ|A Chain A, Crystal Structure Of Full-Length Htpg, The Escherichia
Coli Hsp90
pdb|2IOQ|B Chain B, Crystal Structure Of Full-Length Htpg, The Escherichia
Coli Hsp90
Length = 624
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 105/214 (49%), Gaps = 11/214 (5%)
Query: 85 YVARMKENQKQIYYITGETKDQVANSSFVERVKKRGFEVIYMTEPIDEYVVQQLKDYDGK 144
YV+RMKE Q++IYYIT ++ +S +E ++K+G EV+ +++ IDE+++ L ++DGK
Sbjct: 419 YVSRMKEGQEKIYYITADSYAAAKSSPHLELLRKKGIEVLLLSDRIDEWMMNYLTEFDGK 478
Query: 145 TLVSVTXXXXXXXXXXXXXXXXXXXXXXXXN-LCKVMKDILDKKVEKVIVSNRLVDSPCC 203
SV+ +K +L ++V+ V +++RL D+P
Sbjct: 479 PFQSVSKVDESLEKLADEVDESAKEAEKALTPFIDRVKALLGERVKDVRLTHRLTDTPAI 538
Query: 204 IVTSQYGWTANMERIMKAQALRDTSTMGYMAAKKHLEINPDHSIVETLRQXXXXXXXXXX 263
+ T + M ++ A A + + Y+ E+NPDH +V +
Sbjct: 539 VSTDADEMSTQMAKLFAA-AGQKVPEVKYI-----FELNPDHVLV----KRAADTEDEAK 588
Query: 264 XXXLVNLLFETSLLSSGFTLEEPQVHAARIHRMI 297
V LL + +LL+ TLE+P + R+++++
Sbjct: 589 FSEWVELLLDQALLAERGTLEDPNLFIRRMNQLL 622
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 25/39 (64%), Gaps = 3/39 (7%)
Query: 3 GFYSAYLVADKVTVTSK---HNDDEQYIWESSAGGSFTI 38
GFYSA++VADKVTV ++ + WES+ G +T+
Sbjct: 126 GFYSAFIVADKVTVRTRAAGEKPENGVFWESAGEGEYTV 164
>pdb|3K98|A Chain A, Hsp90 N-Terminal Domain In Complex With
(1r)-2-(5-Chloro-2,
4-Dihydroxybenzoyl)-N-Ethylisoindoline-1-Carboxamide
pdb|3K98|B Chain B, Hsp90 N-Terminal Domain In Complex With
(1r)-2-(5-Chloro-2,
4-Dihydroxybenzoyl)-N-Ethylisoindoline-1-Carboxamide
pdb|3K99|A Chain A, Hsp90 N-Terminal Domain In Complex With 4-(1,3-Dihydro-2h-
Isoindol-2-Ylcarbonyl)benzene-1,3-Diol
pdb|3K99|B Chain B, Hsp90 N-Terminal Domain In Complex With 4-(1,3-Dihydro-2h-
Isoindol-2-Ylcarbonyl)benzene-1,3-Diol
pdb|3K99|C Chain C, Hsp90 N-Terminal Domain In Complex With 4-(1,3-Dihydro-2h-
Isoindol-2-Ylcarbonyl)benzene-1,3-Diol
pdb|3K99|D Chain D, Hsp90 N-Terminal Domain In Complex With 4-(1,3-Dihydro-2h-
Isoindol-2-Ylcarbonyl)benzene-1,3-Diol
Length = 232
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 35/46 (76%), Positives = 41/46 (89%)
Query: 3 GFYSAYLVADKVTVTSKHNDDEQYIWESSAGGSFTIKPDNSQPLGR 48
GFYSAYLVA+KVTV +KHNDDEQY WESSAGGSFT++ D +P+GR
Sbjct: 130 GFYSAYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTDTGEPMGR 175
>pdb|3EKO|A Chain A, Dihydroxylphenyl Amides As Inhibitors Of The Hsp90
Molecular Chaperone
pdb|3EKO|B Chain B, Dihydroxylphenyl Amides As Inhibitors Of The Hsp90
Molecular Chaperone
pdb|3EKR|A Chain A, Dihydroxylphenyl Amides As Inhibitors Of The Hsp90
Molecular Chaperone
pdb|3EKR|B Chain B, Dihydroxylphenyl Amides As Inhibitors Of The Hsp90
Molecular Chaperone
pdb|3HEK|A Chain A, Hsp90 N-Terminal Domain In Complex With 1-{4-[(2r)-1-(5-
Chloro-2,4-Dihydroxybenzoyl)pyrrolidin-2-Yl]benzyl}-3,3-
Difluoropyrrolidinium
pdb|3HEK|B Chain B, Hsp90 N-Terminal Domain In Complex With 1-{4-[(2r)-1-(5-
Chloro-2,4-Dihydroxybenzoyl)pyrrolidin-2-Yl]benzyl}-3,3-
Difluoropyrrolidinium
pdb|3R4N|A Chain A, Optimization Of Potent, Selective, And Orally Bioavailable
Pyrrolodinopyrimidine-Containing Inhibitors Of Heat
Shock Protein 90. Identification Of Development
Candidate 2-Amino-4-{4-Chloro-2-[2-(4-
Fluoro-1h-Pyrazol-1-Yl)ethoxy]-6-Methylphenyl}-N-(2,2-
Difluoropropyl)-5,7-Dihydro-6h-Pyrrolo[3,
4-D]pyrimidine-6-Carboxamide
pdb|3R4N|B Chain B, Optimization Of Potent, Selective, And Orally Bioavailable
Pyrrolodinopyrimidine-Containing Inhibitors Of Heat
Shock Protein 90. Identification Of Development
Candidate 2-Amino-4-{4-Chloro-2-[2-(4-
Fluoro-1h-Pyrazol-1-Yl)ethoxy]-6-Methylphenyl}-N-(2,2-
Difluoropropyl)-5,7-Dihydro-6h-Pyrrolo[3,
4-D]pyrimidine-6-Carboxamide
pdb|3R4O|A Chain A, Optimization Of Potent, Selective, And Orally Bioavailable
Pyrrolodinopyrimidine-Containing Inhibitors Of Heat
Shock Protein 90. Identification Of Development
Candidate 2-Amino-4-{4-Chloro-2-[2-(4-
Fluoro-1h-Pyrazol-1-Yl)ethoxy]-6-Methylphenyl}-N-(2,2-
Difluoropropyl)-5,7-Dihydro-6h-Pyrrolo[3,
4-D]pyrimidine-6-Carboxamide
pdb|3R4O|B Chain B, Optimization Of Potent, Selective, And Orally Bioavailable
Pyrrolodinopyrimidine-Containing Inhibitors Of Heat
Shock Protein 90. Identification Of Development
Candidate 2-Amino-4-{4-Chloro-2-[2-(4-
Fluoro-1h-Pyrazol-1-Yl)ethoxy]-6-Methylphenyl}-N-(2,2-
Difluoropropyl)-5,7-Dihydro-6h-Pyrrolo[3,
4-D]pyrimidine-6-Carboxamide
pdb|3R4P|A Chain A, Optimization Of Potent, Selective, And Orally Bioavailable
Pyrrolodinopyrimidine-Containing Inhibitors Of Heat
Shock Protein 90. Identification Of Development
Candidate 2-Amino-4-{4-Chloro-2-[2-(4-
Fluoro-1h-Pyrazol-1-Yl)ethoxy]-6-Methylphenyl}-N-(2,2-
Difluoropropyl)-5,7-Dihydro-6h-Pyrrolo[3,
4-D]pyrimidine-6-Carboxamide
pdb|3R4P|B Chain B, Optimization Of Potent, Selective, And Orally Bioavailable
Pyrrolodinopyrimidine-Containing Inhibitors Of Heat
Shock Protein 90. Identification Of Development
Candidate 2-Amino-4-{4-Chloro-2-[2-(4-
Fluoro-1h-Pyrazol-1-Yl)ethoxy]-6-Methylphenyl}-N-(2,2-
Difluoropropyl)-5,7-Dihydro-6h-Pyrrolo[3,
4-D]pyrimidine-6-Carboxamide
pdb|3RLP|A Chain A, Co-Crystal Structure Of The Hsp90 Atp Binding Domain In
Complex With
4-(2,
4-Dichloro-5-Methoxyphenyl)-6-Methylpyrimidin-2-Amine
pdb|3RLP|B Chain B, Co-Crystal Structure Of The Hsp90 Atp Binding Domain In
Complex With
4-(2,
4-Dichloro-5-Methoxyphenyl)-6-Methylpyrimidin-2-Amine
pdb|3RLQ|A Chain A, Co-Crystal Structure Of The Hsp90 Atp Binding Domain In
Complex With
4-(2,4-Dichloro-5-Methoxyphenyl)-2-Methyl-7h-Pyrrolo[2,
3- D]pyrimidine-5- Carbonitrile
pdb|3RLQ|B Chain B, Co-Crystal Structure Of The Hsp90 Atp Binding Domain In
Complex With
4-(2,4-Dichloro-5-Methoxyphenyl)-2-Methyl-7h-Pyrrolo[2,
3- D]pyrimidine-5- Carbonitrile
pdb|3RLR|A Chain A, Co-Crystal Structure Of The Hsp90 Atp Binding Domain In
Complex With
4-(2,4-Dichloro-5-Methoxyphenyl)-2,
6-Dimethyl-7h-Pyrrolo[2,3- D]pyrimidine-5-Carbonitrile
pdb|3RLR|B Chain B, Co-Crystal Structure Of The Hsp90 Atp Binding Domain In
Complex With
4-(2,4-Dichloro-5-Methoxyphenyl)-2,
6-Dimethyl-7h-Pyrrolo[2,3- D]pyrimidine-5-Carbonitrile
Length = 226
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 35/46 (76%), Positives = 41/46 (89%)
Query: 3 GFYSAYLVADKVTVTSKHNDDEQYIWESSAGGSFTIKPDNSQPLGR 48
GFYSAYLVA+KVTV +KHNDDEQY WESSAGGSFT++ D +P+GR
Sbjct: 130 GFYSAYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTDTGEPMGR 175
>pdb|3INW|A Chain A, Hsp90 N-Terminal Domain With Pochoxime A
pdb|3INX|A Chain A, Hsp90 N-Terminal Domain With Pochoxime B
Length = 228
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 35/46 (76%), Positives = 41/46 (89%)
Query: 3 GFYSAYLVADKVTVTSKHNDDEQYIWESSAGGSFTIKPDNSQPLGR 48
GFYSAYLVA+KVTV +KHNDDEQY WESSAGGSFT++ D +P+GR
Sbjct: 129 GFYSAYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTDTGEPMGR 174
>pdb|2CCS|A Chain A, Human Hsp90 With
4-Chloro-6-(4-Piperazin-1-Yl-1h-Pyrazol-3-
Yl)-Benzene-1,2-Diol
pdb|2CCT|A Chain A, Human Hsp90 With 5-(5-Chloro-2,4-Dihydroxy-Phenyl)-4-
Piperazin-1-Yl-2h-Pyrazole-3-Carboxylic Acid Ethylamide
pdb|2CCU|A Chain A, Human Hsp90 With 4-Chloro-6-(4-(4-(4-Methanesulphonyl-
Benzyl)-Pierazin-1-Yl)-1h-Pyrazol-3-Yl)-Benzene-1,3-Diol
Length = 236
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 35/46 (76%), Positives = 41/46 (89%)
Query: 3 GFYSAYLVADKVTVTSKHNDDEQYIWESSAGGSFTIKPDNSQPLGR 48
GFYSAYLVA+KVTV +KHNDDEQY WESSAGGSFT++ D +P+GR
Sbjct: 137 GFYSAYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTDTGEPMGR 182
>pdb|2YI0|A Chain A, Structural Characterization Of
5-Aryl-4-(5-Substituted-2-4-
Dihydroxyphenyl)-1,2,3-Thiadiazole Hsp90 Inhibitors.
pdb|2YI5|A Chain A, Structural Characterization Of
5-Aryl-4-(5-Substituted-2-4-
Dihydroxyphenyl)-1,2,3-Thiadiazole Hsp90 Inhibitors.
pdb|2YI6|A Chain A, Structural Characterization Of 5-Aryl-4-(5-Substituted-2-
4-Dihydroxyphenyl)-1,2,3-Thiadiazole Hsp90 Inhibitors.
pdb|2YI7|A Chain A, Structural Characterization Of
5-Aryl-4-(5-Substituted-2-4-
Dihydroxyphenyl)-1,2,3-Thiadiazole Hsp90 Inhibitors
Length = 229
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 35/46 (76%), Positives = 41/46 (89%)
Query: 3 GFYSAYLVADKVTVTSKHNDDEQYIWESSAGGSFTIKPDNSQPLGR 48
GFYSAYLVA+KVTV +KHNDDEQY WESSAGGSFT++ D +P+GR
Sbjct: 137 GFYSAYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTDTGEPMGR 182
>pdb|2BSM|A Chain A, Novel, Potent Small Molecule Inhibitors Of The Molecular
Chaperone Hsp90 Discovered Through Structure-Based
Design
pdb|2BT0|A Chain A, Novel, Potent Small Molecule Inhibitors Of The Molecular
Chaperone Hsp90 Discovered Through Structure-Based
Design
pdb|2BT0|B Chain B, Novel, Potent Small Molecule Inhibitors Of The Molecular
Chaperone Hsp90 Discovered Through Structure-Based
Design
pdb|2BYH|A Chain A, 3-(5-Chloro-2,4-Dihydroxyphenyl)-Pyrazole-4-Carboxamides
As Inhibitors Of The Hsp90 Molecular Chaperone
pdb|2BYI|A Chain A, 3-(5-Chloro-2,4-Dihydroxyphenyl)-Pyrazole-4-Carboxamides
As Inhibitors Of The Hsp90 Molecular Chaperone
pdb|2BZ5|A Chain A, Structure-Based Discovery Of A New Class Of Hsp90
Inhibitors
pdb|2BZ5|B Chain B, Structure-Based Discovery Of A New Class Of Hsp90
Inhibitors
Length = 235
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 35/46 (76%), Positives = 41/46 (89%)
Query: 3 GFYSAYLVADKVTVTSKHNDDEQYIWESSAGGSFTIKPDNSQPLGR 48
GFYSAYLVA+KVTV +KHNDDEQY WESSAGGSFT++ D +P+GR
Sbjct: 136 GFYSAYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTDTGEPMGR 181
>pdb|1UY6|A Chain A, Human Hsp90-Alpha With
9-Butyl-8-(3,4,5-Trimethoxy-Benzyl)-9h-Purin-6-Ylamine
pdb|1UY7|A Chain A, Human Hsp90-alpha With
9-butyl-8-(4-methoxy-benzyl)-9h-purin-6-ylamine
pdb|1UY8|A Chain A, Human Hsp90-Alpha With
9-Butyl-8-(3-Trimethoxy-Benzyl)-9h-Purin-6ylamine
pdb|1UY9|A Chain A, Human Hsp90-Alpha With
8-Benzo[1,3]dioxol-,
5-Ylmethyl-9-Butyl-9h-Purin-6-Ylamine
pdb|1UYC|A Chain A, Human Hsp90-Alpha With
9-Butyl-8-(2,5-Dimethoxy-Benzyl)-9h-Purin-6-Ylamine
pdb|1UYD|A Chain A, Human Hsp90-Alpha With 9-Butyl-8-
(2-Chloro-3,4,5-Trimethoxy-Benzyl)-9h-Purin-6-Ylamine
pdb|1UYE|A Chain A, Human Hsp90-Alpha With
8-(2-Chloro-3,4,5-Trimethoxy-Benzyl)
-9-Pent-4-Ylnyl-9h-Purin-6-Ylamine
pdb|1UYF|A Chain A, Human Hsp90-Alpha With
8-(2-Chloro-3,4,5-Trimethoxy-Benzyl)
-2-Fluoro-9-Pent-4-Ylnyl-9h-Purin-6-Ylamine
pdb|1UYG|A Chain A, Human Hsp90-Alpha With
8-(2,5-Dimethoxy-Benzyl)-2-Fluoro-9h-Purin-6-Ylamine
pdb|1UYH|A Chain A, Human Hsp90-Alpha With 9-Butyl-8-
(2,5-Dimethoxy-Benzyl)-2-Fluoro-9h-Purin-6-Ylamine
pdb|1UYK|A Chain A, Human Hsp90-Alpha With
8-Benzo[1,3]dioxol-,5-Ylmethyl-9-But
Yl-2-Fluoro-9h-Purin-6-Ylamine
pdb|1UYL|A Chain A, Structure-Activity Relationships In Purine-Based Inhibitor
Binding To Hsp90 Isoforms
pdb|2UWD|A Chain A, Inhibition Of The Hsp90 Molecular Chaperone In Vitro And
In Vivo By Novel, Synthetic, Potent Resorcinylic
Pyrazole, Isoxazole Amide Analogs
pdb|2VCI|A Chain A, 4,5 Diaryl Isoxazole Hsp90 Chaperone Inhibitors: Potential
Therapeutic Agents For The Treatment Of Cancer
pdb|2VCJ|A Chain A, 4,5 Diaryl Isoxazole Hsp90 Chaperone Inhibitors: Potential
Therapeutic Agents For The Treatment Of Cancer
pdb|2WI1|A Chain A, Orally Active 2-Amino Thienopyrimidine Inhibitors Of The
Hsp90 Chaperone
pdb|2WI2|A Chain A, Orally Active 2-Amino Thienopyrimidine Inhibitors Of The
Hsp90 Chaperone
pdb|2WI2|B Chain B, Orally Active 2-Amino Thienopyrimidine Inhibitors Of The
Hsp90 Chaperone
pdb|2WI3|A Chain A, Orally Active 2-Amino Thienopyrimidine Inhibitors Of The
Hsp90 Chaperone
pdb|2WI4|A Chain A, Orally Active 2-Amino Thienopyrimidine Inhibitors Of The
Hsp90 Chaperone
pdb|2WI5|A Chain A, Orally Active 2-Amino Thienopyrimidine Inhibitors Of The
Hsp90 Chaperone
pdb|2WI6|A Chain A, Orally Active 2-Amino Thienopyrimidine Inhibitors Of The
Hsp90 Chaperone
pdb|2WI7|A Chain A, Orally Active 2-Amino Thienopyrimidine Inhibitors Of The
Hsp90 Chaperone
pdb|4FCP|A Chain A, Targetting Conserved Water Molecules: Design Of
4-Aryl-5-Cyanopyrrolo [2,3-D] Pyrimidine Hsp90
Inhibitors Using Fragment-Based Screening And
Structure-Based Optimization
pdb|4FCP|B Chain B, Targetting Conserved Water Molecules: Design Of
4-Aryl-5-Cyanopyrrolo [2,3-D] Pyrimidine Hsp90
Inhibitors Using Fragment-Based Screening And
Structure-Based Optimization
pdb|4FCQ|A Chain A, Targeting Conserved Water Molecules: Design Of 4-Aryl-5-
Cyanopyrrolo[2,3-D]pyrimidine Hsp90 Inhibitors Using
Fragment-Based Screening And Structure-Based
Optimization
pdb|4FCR|A Chain A, Targeting Conserved Water Molecules: Design Of 4-Aryl-5-
Cyanopyrrolo[2,3-D]pyrimidine Hsp90 Inhibitors Using
Fragment-Based Screening And Structure-Based
Optimization
Length = 236
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 35/46 (76%), Positives = 41/46 (89%)
Query: 3 GFYSAYLVADKVTVTSKHNDDEQYIWESSAGGSFTIKPDNSQPLGR 48
GFYSAYLVA+KVTV +KHNDDEQY WESSAGGSFT++ D +P+GR
Sbjct: 137 GFYSAYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTDTGEPMGR 182
>pdb|3B24|A Chain A, Hsp90 Alpha N-Terminal Domain In Complex With An
Aminotriazine Fragment Molecule
pdb|3B24|B Chain B, Hsp90 Alpha N-Terminal Domain In Complex With An
Aminotriazine Fragment Molecule
pdb|3B25|A Chain A, Hsp90 Alpha N-Terminal Domain In Complex With An Inhibitor
Ch4675194
pdb|3B26|A Chain A, Hsp90 Alpha N-Terminal Domain In Complex With An Inhibitor
Ro1127850
pdb|3B26|B Chain B, Hsp90 Alpha N-Terminal Domain In Complex With An Inhibitor
Ro1127850
pdb|3B27|A Chain A, Hsp90 Alpha N-Terminal Domain In Complex With An Inhibitor
Ro4919127
pdb|3B28|A Chain A, Hsp90 Alpha N-Terminal Domain In Complex With An Inhibitor
Ch5015765
pdb|3B28|B Chain B, Hsp90 Alpha N-Terminal Domain In Complex With An Inhibitor
Ch5015765
pdb|3VHA|A Chain A, Hsp90 Alpha N-Terminal Domain In Complex With A
Macrocyclic Inhibitor
pdb|3VHC|A Chain A, Hsp90 Alpha N-Terminal Domain In Complex With A
Macrocyclic Inhibitor
pdb|3VHD|A Chain A, Hsp90 Alpha N-Terminal Domain In Complex With A
Macrocyclic Inhibitor, Ch5164840
pdb|3VHD|B Chain B, Hsp90 Alpha N-Terminal Domain In Complex With A
Macrocyclic Inhibitor, Ch5164840
Length = 229
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 35/46 (76%), Positives = 41/46 (89%)
Query: 3 GFYSAYLVADKVTVTSKHNDDEQYIWESSAGGSFTIKPDNSQPLGR 48
GFYSAYLVA+KVTV +KHNDDEQY WESSAGGSFT++ D +P+GR
Sbjct: 130 GFYSAYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTDTGEPMGR 175
>pdb|2K5B|A Chain A, Human Cdc37-Hsp90 Docking Model Based On Nmr
Length = 210
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 35/46 (76%), Positives = 41/46 (89%)
Query: 3 GFYSAYLVADKVTVTSKHNDDEQYIWESSAGGSFTIKPDNSQPLGR 48
GFYSAYLVA+KVTV +KHNDDEQY WESSAGGSFT++ D +P+GR
Sbjct: 124 GFYSAYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTDTGEPMGR 169
>pdb|3TUH|A Chain A, Crystal Structure Of The N-Terminal Domain Of An Hsp90 In
The Presence Of An The Inhibitor Ganetespib
pdb|3TUH|B Chain B, Crystal Structure Of The N-Terminal Domain Of An Hsp90 In
The Presence Of An The Inhibitor Ganetespib
Length = 209
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 35/46 (76%), Positives = 41/46 (89%)
Query: 3 GFYSAYLVADKVTVTSKHNDDEQYIWESSAGGSFTIKPDNSQPLGR 48
GFYSAYLVA+KVTV +KHNDDEQY WESSAGGSFT++ D +P+GR
Sbjct: 122 GFYSAYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTDTGEPMGR 167
>pdb|3R4M|A Chain A, Optimization Of Potent, Selective, And Orally Bioavailable
Pyrrolodinopyrimidine-Containing Inhibitors Of Heat
Shock Protein 90. Identification Of Development
Candidate 2-Amino-4-{4-Chloro-2-[2-(4-
Fluoro-1h-Pyrazol-1-Yl)ethoxy]-6-Methylphenyl}-N-(2,2-
Difluoropropyl)-5,7-Dihydro-6h-Pyrrolo[3,
4-D]pyrimidine-6-Carboxamide
pdb|3T0H|A Chain A, Structure Insights Into Mechanisms Of Atp Hydrolysis And
The Activation Of Human Hsp90
pdb|3T0Z|A Chain A, Hsp90 N-Terminal Domain Bound To Atp
pdb|3T10|A Chain A, Hsp90 N-Terminal Domain Bound To Acp
pdb|3T1K|A Chain A, Hsp90 N-Terminal Domain Bound To Anp
pdb|3T1K|B Chain B, Hsp90 N-Terminal Domain Bound To Anp
pdb|3T2S|A Chain A, Hsp90 N-Terminal Domain Bound To Ags
pdb|3T2S|B Chain B, Hsp90 N-Terminal Domain Bound To Ags
Length = 228
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 35/46 (76%), Positives = 41/46 (89%)
Query: 3 GFYSAYLVADKVTVTSKHNDDEQYIWESSAGGSFTIKPDNSQPLGR 48
GFYSAYLVA+KVTV +KHNDDEQY WESSAGGSFT++ D +P+GR
Sbjct: 129 GFYSAYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTDTGEPMGR 174
>pdb|3D0B|A Chain A, Crystal Structure Of Benzamide
Tetrahydro-4h-Carbazol-4-One Bound To Hsp90
pdb|3MNR|P Chain P, Crystal Structure Of Benzamide Snx-1321 Bound To Hsp90
Length = 232
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 35/46 (76%), Positives = 41/46 (89%)
Query: 3 GFYSAYLVADKVTVTSKHNDDEQYIWESSAGGSFTIKPDNSQPLGR 48
GFYSAYLVA+KVTV +KHNDDEQY WESSAGGSFT++ D +P+GR
Sbjct: 137 GFYSAYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTDTGEPMGR 182
>pdb|1BYQ|A Chain A, Hsp90 N-Terminal Domain Bound To Adp-Mg
pdb|1YER|A Chain A, Human Hsp90 Geldanamycin-Binding Domain, "closed"
Conformation
pdb|1YES|A Chain A, Human Hsp90 Geldanamycin-Binding Domain, "open"
Conformation
pdb|1YET|A Chain A, Geldanamycin Bound To The Hsp90 Geldanamycin-Binding
Domain
Length = 228
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 35/46 (76%), Positives = 41/46 (89%)
Query: 3 GFYSAYLVADKVTVTSKHNDDEQYIWESSAGGSFTIKPDNSQPLGR 48
GFYSAYLVA+KVTV +KHNDDEQY WESSAGGSFT++ D +P+GR
Sbjct: 129 GFYSAYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTDTGEPMGR 174
>pdb|3HHU|A Chain A, Human Heat-Shock Protein 90 (Hsp90) In Complex With {4-[3-
(2,4-Dihydroxy-5-Isopropyl-Phenyl)-5-Thioxo-
1,5-Dihydro- [1,2,4]triazol-4-Yl]-Benzyl}-Carbamic Acid
Ethyl Ester {zk 2819}
pdb|3HHU|B Chain B, Human Heat-Shock Protein 90 (Hsp90) In Complex With {4-[3-
(2,4-Dihydroxy-5-Isopropyl-Phenyl)-5-Thioxo-
1,5-Dihydro- [1,2,4]triazol-4-Yl]-Benzyl}-Carbamic Acid
Ethyl Ester {zk 2819}
Length = 224
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 35/46 (76%), Positives = 41/46 (89%)
Query: 3 GFYSAYLVADKVTVTSKHNDDEQYIWESSAGGSFTIKPDNSQPLGR 48
GFYSAYLVA+KVTV +KHNDDEQY WESSAGGSFT++ D +P+GR
Sbjct: 137 GFYSAYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTDTGEPMGR 182
>pdb|3QDD|A Chain A, Hsp90a N-Terminal Domain In Complex With Biib021
Length = 237
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 35/46 (76%), Positives = 41/46 (89%)
Query: 3 GFYSAYLVADKVTVTSKHNDDEQYIWESSAGGSFTIKPDNSQPLGR 48
GFYSAYLVA+KVTV +KHNDDEQY WESSAGGSFT++ D +P+GR
Sbjct: 138 GFYSAYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTDTGEPMGR 183
>pdb|4EEH|A Chain A, Hsp90 Alpha N-Terminal Domain In Complex With An Inhibitor
3-(4- Hydroxy-Phenyl)-1h-Indazol-6-Ol
pdb|4EFT|A Chain A, Hsp90 Alpha N-Terminal Domain In Complex With An Inhibitor
3-
Cyclohexyl-2-(6-Hydroxy-1h-Indazol-3-Yl)-Propionitrile
pdb|4EFU|A Chain A, Hsp90 Alpha N-Terminal Domain In Complex With An Inhibitor
6-Hydroxy- 3-(3-Methyl-Benzyl)-1h-Indazole-5-Carboxylic
Acid Benzyl-Methyl-Amide
Length = 229
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 35/46 (76%), Positives = 41/46 (89%)
Query: 3 GFYSAYLVADKVTVTSKHNDDEQYIWESSAGGSFTIKPDNSQPLGR 48
GFYSAYLVA+KVTV +KHNDDEQY WESSAGGSFT++ D +P+GR
Sbjct: 130 GFYSAYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTDTGEPMGR 175
>pdb|2QF6|A Chain A, Hsp90 Complexed With A56322
pdb|2QF6|B Chain B, Hsp90 Complexed With A56322
pdb|2QF6|C Chain C, Hsp90 Complexed With A56322
pdb|2QF6|D Chain D, Hsp90 Complexed With A56322
pdb|2QG2|A Chain A, Hsp90 Complexed With A917985
pdb|3OW6|A Chain A, Crystal Structure Of Hsp90 With N-Aryl-Benzimidazolone I
pdb|3OWB|A Chain A, Crystal Structure Of Hsp90 With Ver-49009
pdb|3OWD|A Chain A, Crystal Structure Of Hsp90 With N-Aryl-Benzimidazolone Ii
Length = 207
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 35/46 (76%), Positives = 41/46 (89%)
Query: 3 GFYSAYLVADKVTVTSKHNDDEQYIWESSAGGSFTIKPDNSQPLGR 48
GFYSAYLVA+KVTV +KHNDDEQY WESSAGGSFT++ D +P+GR
Sbjct: 121 GFYSAYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTDTGEPMGR 166
>pdb|1OSF|A Chain A, Human Hsp90 In Complex With 17-desmethoxy-17-n,n-
Dimethylaminoethylamino-geldanamycin
Length = 215
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 35/46 (76%), Positives = 41/46 (89%)
Query: 3 GFYSAYLVADKVTVTSKHNDDEQYIWESSAGGSFTIKPDNSQPLGR 48
GFYSAYLVA+KVTV +KHNDDEQY WESSAGGSFT++ D +P+GR
Sbjct: 129 GFYSAYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTDTGEPMGR 174
>pdb|4AWO|A Chain A, Complex Of Hsp90 Atpase Domain With Tropane Derived
Inhibitors
pdb|4AWO|B Chain B, Complex Of Hsp90 Atpase Domain With Tropane Derived
Inhibitors
pdb|4AWP|A Chain A, Complex Of Hsp90 Atpase Domain With Tropane Derived
Inhibitors
pdb|4AWP|B Chain B, Complex Of Hsp90 Atpase Domain With Tropane Derived
Inhibitors
pdb|4AWQ|A Chain A, Complex Of Hsp90 Atpase Domain With Tropane Derived
Inhibitors
pdb|4AWQ|B Chain B, Complex Of Hsp90 Atpase Domain With Tropane Derived
Inhibitors
Length = 230
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 35/46 (76%), Positives = 41/46 (89%)
Query: 3 GFYSAYLVADKVTVTSKHNDDEQYIWESSAGGSFTIKPDNSQPLGR 48
GFYSAYLVA+KVTV +KHNDDEQY WESSAGGSFT++ D +P+GR
Sbjct: 131 GFYSAYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTDTGEPMGR 176
>pdb|2YE2|A Chain A, Hsp90 Inhibitors And Drugs From Fragment And Virtual
Screening
pdb|2YE3|A Chain A, Hsp90 Inhibitors And Drugs From Fragment And Virtual
Screening
pdb|2YE4|A Chain A, Hsp90 Inhibitors And Drugs From Fragment And Virtual
Screening
pdb|2YE5|A Chain A, Hsp90 Inhibitors And Drugs From Fragment And Virtual
Screening
pdb|2YE6|A Chain A, Hsp90 Inhibitors And Drugs From Fragment And Virtual
Screening
pdb|2YE9|A Chain A, Hsp90 Inhibitors And Drugs From Fragment And Virtual
Screening
pdb|2YEA|A Chain A, Hsp90 Inhibitors And Drugs From Fragment And Virtual
Screening
pdb|2YEB|A Chain A, Hsp90 Inhibitors And Drugs From Fragment And Virtual
Screening
pdb|2YEC|A Chain A, Hsp90 Inhibitors And Drugs From Fragment And Virtual
Screening
pdb|2YED|A Chain A, Hsp90 Inhibitors And Drugs From Fragment And Virtual
Screening
pdb|2YEF|A Chain A, Hsp90 Inhibitors And Drugs From Fragment And Virtual
Screening
pdb|2YEG|A Chain A, Hsp90 Inhibitors And Drugs From Fragment And Virtual
Screening
pdb|2YEG|B Chain B, Hsp90 Inhibitors And Drugs From Fragment And Virtual
Screening
pdb|2YEH|A Chain A, Hsp90 Inhibitors And Drugs From Fragment And Virtual
Screening
Length = 252
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 35/46 (76%), Positives = 41/46 (89%)
Query: 3 GFYSAYLVADKVTVTSKHNDDEQYIWESSAGGSFTIKPDNSQPLGR 48
GFYSAYLVA+KVTV +KHNDDEQY WESSAGGSFT++ D +P+GR
Sbjct: 153 GFYSAYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTDTGEPMGR 198
>pdb|3BM9|A Chain A, Discovery Of Benzisoxazoles As Potent Inhibitors Of
Chaperone Hsp90
pdb|3BMY|A Chain A, Discovery Of Benzisoxazoles As Potent Inhibitors Of
Chaperone Hsp90
pdb|3QTF|A Chain A, Design And Sar Of Macrocyclic Hsp90 Inhibitors With
Increased Metabolic Stability And Potent
Cell-Proliferation Activity
pdb|3R91|A Chain A, Macrocyclic Lactams As Potent Hsp90 Inhibitors With
Excellent Tumor Exposure And Extended Biomarker
Activity.
pdb|3R92|A Chain A, Discovery Of A Macrocyclic O-Aminobenzamide Hsp90
Inhibitor With Heterocyclic Tether That Shows Extended
Biomarker Activity And In Vivo Efficacy In A Mouse
Xenograft Model.
pdb|3RKZ|A Chain A, Discovery Of A Stable Macrocyclic O-Aminobenzamide Hsp90
Inhibitor Capable Of Significantly Decreasing Tumor
Volume In A Mouse Xenograft Model
Length = 226
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 35/46 (76%), Positives = 41/46 (89%)
Query: 3 GFYSAYLVADKVTVTSKHNDDEQYIWESSAGGSFTIKPDNSQPLGR 48
GFYSAYLVA+KVTV +KHNDDEQY WESSAGGSFT++ D +P+GR
Sbjct: 127 GFYSAYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTDTGEPMGR 172
>pdb|1UYI|A Chain A, Human Hsp90-Alpha With
8-(2,5-Dimethoxy-Benzyl)-2-Fluoro-9-
Pent-9h-Purin-6-Ylamine
Length = 236
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 35/46 (76%), Positives = 41/46 (89%)
Query: 3 GFYSAYLVADKVTVTSKHNDDEQYIWESSAGGSFTIKPDNSQPLGR 48
GFYSAYLVA+KVTV +KHNDDEQY WESSAGGSFT++ D +P+GR
Sbjct: 137 GFYSAYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTDTGEPMGR 182
>pdb|4EGH|A Chain A, Hsp90-Alpha Atpase Domain In Complex With
(4-Hydroxyphenyl)morpholin- 4-Yl Methanone
pdb|4EGI|A Chain A, Hsp90-Alpha Atpase Domain In Complex With
2-Amino-4-Ethylthio-6- Methyl-1,3,5-Triazine
pdb|4EGK|A Chain A, Human Hsp90-Alpha Atpase Domain Bound To Radicicol
Length = 232
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 35/46 (76%), Positives = 41/46 (89%)
Query: 3 GFYSAYLVADKVTVTSKHNDDEQYIWESSAGGSFTIKPDNSQPLGR 48
GFYSAYLVA+KVTV +KHNDDEQY WESSAGGSFT++ D +P+GR
Sbjct: 133 GFYSAYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTDTGEPMGR 178
>pdb|2YEE|A Chain A, Hsp90 Inhibitors And Drugs From Fragment And Virtual
Screening
Length = 252
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 35/46 (76%), Positives = 41/46 (89%)
Query: 3 GFYSAYLVADKVTVTSKHNDDEQYIWESSAGGSFTIKPDNSQPLGR 48
GFYSAYLVA+KVTV +KHNDDEQY WESSAGGSFT++ D +P+GR
Sbjct: 153 GFYSAYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTDTGEPMGR 198
>pdb|2YE7|A Chain A, Hsp90 Inhibitors And Drugs From Fragment And Virtual
Screening
pdb|2YE8|A Chain A, Hsp90 Inhibitors And Drugs From Fragment And Virtual
Screening
pdb|2YEI|A Chain A, Hsp90 Inhibitors And Drugs From Fragment And Virtual
Screening
pdb|2YEJ|A Chain A, Hsp90 Inhibitors And Drugs From Fragment And Virtual
Screening
Length = 252
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 35/46 (76%), Positives = 41/46 (89%)
Query: 3 GFYSAYLVADKVTVTSKHNDDEQYIWESSAGGSFTIKPDNSQPLGR 48
GFYSAYLVA+KVTV +KHNDDEQY WESSAGGSFT++ D +P+GR
Sbjct: 153 GFYSAYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTDTGEPMGR 198
>pdb|2QFO|A Chain A, Hsp90 Complexed With A143571 And A516383
pdb|2QFO|B Chain B, Hsp90 Complexed With A143571 And A516383
pdb|2QG0|A Chain A, Hsp90 Complexed With A943037
pdb|2QG0|B Chain B, Hsp90 Complexed With A943037
Length = 207
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 35/46 (76%), Positives = 41/46 (89%)
Query: 3 GFYSAYLVADKVTVTSKHNDDEQYIWESSAGGSFTIKPDNSQPLGR 48
GFYSAYLVA+KVTV +KHNDDEQY WESSAGGSFT++ D +P+GR
Sbjct: 121 GFYSAYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTDTGEPMGR 166
>pdb|1YC1|A Chain A, Crystal Structures Of Human Hsp90alpha Complexed With
Dihydroxyphenylpyrazoles
pdb|1YC3|A Chain A, Crystal Structure Of Human Hsp90alpha Complexed With
Dihydroxyphenylpyrazoles
pdb|1YC4|A Chain A, Crystal Structure Of Human Hsp90alpha Complexed With
Dihydroxyphenylpyrazoles
Length = 264
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 35/46 (76%), Positives = 41/46 (89%)
Query: 3 GFYSAYLVADKVTVTSKHNDDEQYIWESSAGGSFTIKPDNSQPLGR 48
GFYSAYLVA+KVTV +KHNDDEQY WESSAGGSFT++ D +P+GR
Sbjct: 165 GFYSAYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTDTGEPMGR 210
>pdb|2FWY|A Chain A, Structure Of Human Hsp90-Alpha Bound To The Potent Water
Soluble Inhibitor Pu-H64
pdb|2FWZ|A Chain A, Structure Of Human Hsp90-alpha Bound To The Potent Water
Soluble Inhibitor Pu-h71
pdb|2H55|A Chain A, Structure Of Human Hsp90-Alpha Bound To The Potent Water
Soluble Inhibitor Pu-Dz8
pdb|3O0I|A Chain A, Structure Of The Human Hsp90-Alpha N-Domain Bound To The
Hsp90 Inhibitor Pu-H54
Length = 256
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 35/46 (76%), Positives = 41/46 (89%)
Query: 3 GFYSAYLVADKVTVTSKHNDDEQYIWESSAGGSFTIKPDNSQPLGR 48
GFYSAYLVA+KVTV +KHNDDEQY WESSAGGSFT++ D +P+GR
Sbjct: 157 GFYSAYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTDTGEPMGR 202
>pdb|2XJG|A Chain A, Structure Of Hsp90 With Small Molecule Inhibitor Bound
pdb|2XHX|A Chain A, Structure Of Hsp90 With Small Molecule Inhibitor Bound
Length = 249
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 35/46 (76%), Positives = 41/46 (89%)
Query: 3 GFYSAYLVADKVTVTSKHNDDEQYIWESSAGGSFTIKPDNSQPLGR 48
GFYSAYLVA+KVTV +KHNDDEQY WESSAGGSFT++ D +P+GR
Sbjct: 150 GFYSAYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTDTGEPMGR 195
>pdb|2YJW|A Chain A, Tricyclic Series Of Hsp90 Inhibitors
pdb|2YJX|A Chain A, Tricyclic Series Of Hsp90 Inhibitors
pdb|2YK2|A Chain A, Tricyclic Series Of Hsp90 Inhibitors
pdb|2YKB|A Chain A, Tricyclic Series Of Hsp90 Inhibitors
pdb|2YKC|A Chain A, Tricyclic Series Of Hsp90 Inhibitors
pdb|2YKE|A Chain A, Tricyclic Series Of Hsp90 Inhibitors
pdb|2YKI|A Chain A, Tricyclic Series Of Hsp90 Inhibitors
pdb|2YKJ|A Chain A, Tricyclic Series Of Hsp90 Inhibitors
pdb|2YK9|A Chain A, Tricyclic Series Of Hsp90 Inhibitors
Length = 209
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 35/46 (76%), Positives = 41/46 (89%)
Query: 3 GFYSAYLVADKVTVTSKHNDDEQYIWESSAGGSFTIKPDNSQPLGR 48
GFYSAYLVA+KVTV +KHNDDEQY WESSAGGSFT++ D +P+GR
Sbjct: 123 GFYSAYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTDTGEPMGR 168
>pdb|3K97|A Chain A, Hsp90 N-Terminal Domain In Complex With
4-Chloro-6-{[(2r)-2-
(2-Methylphenyl)pyrrolidin-1-Yl]carbonyl}benzene-1,
3-Diol
Length = 251
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 35/46 (76%), Positives = 41/46 (89%)
Query: 3 GFYSAYLVADKVTVTSKHNDDEQYIWESSAGGSFTIKPDNSQPLGR 48
GFYSAYLVA+KVTV +KHNDDEQY WESSAGGSFT++ D +P+GR
Sbjct: 152 GFYSAYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTDTGEPMGR 197
>pdb|3FT5|A Chain A, Structure Of Hsp90 Bound With A Novel Fragment
pdb|3FT8|A Chain A, Structure Of Hsp90 Bound With A Noval Fragment.
pdb|3HYY|A Chain A, Crystal Structure Of Hsp90 With Fragment 37-D04
pdb|3HYZ|A Chain A, Crystal Structure Of Hsp90 With Fragment 42-C03
pdb|3HYZ|B Chain B, Crystal Structure Of Hsp90 With Fragment 42-C03
pdb|3HZ1|A Chain A, Crystal Structure Of Hsp90 With Fragments 37-D04 And
42-C03
pdb|3HZ5|A Chain A, Crystal Structure Of Hsp90 With Fragment Z064
pdb|2XAB|A Chain A, Structure Of Hsp90 With An Inhibitor Bound
pdb|2XAB|B Chain B, Structure Of Hsp90 With An Inhibitor Bound
pdb|2XJX|A Chain A, Structre Of Hsp90 With Small Molecule Inhibitor Bound
pdb|2XDK|A Chain A, Structure Of Hsp90 With Small Molecule Inhibitor Bound
pdb|2XDL|A Chain A, Structure Of Hsp90 With Small Molecule Inhibitor Bound
pdb|2XDS|A Chain A, Structre Of Hsp90 With Small Molecule Inhibitor Bound
pdb|2XDX|A Chain A, Structre Of Hsp90 With Small Molecule Inhibitor Bound
pdb|2XHR|A Chain A, Structure Of Hsp90 With Small Molecule Inhibitor Bound
pdb|2XHT|A Chain A, Structure Of Hsp90 With Small Molecule Inhibitor Bound
pdb|2XK2|A Chain A, Structre Of Hsp90 With Small Molecule Inhibitor Bound
Length = 249
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 35/46 (76%), Positives = 41/46 (89%)
Query: 3 GFYSAYLVADKVTVTSKHNDDEQYIWESSAGGSFTIKPDNSQPLGR 48
GFYSAYLVA+KVTV +KHNDDEQY WESSAGGSFT++ D +P+GR
Sbjct: 150 GFYSAYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTDTGEPMGR 195
>pdb|2JJC|A Chain A, Hsp90 Alpha Atpase Domain With Bound Small Molecule
Fragment
Length = 218
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 35/46 (76%), Positives = 41/46 (89%)
Query: 3 GFYSAYLVADKVTVTSKHNDDEQYIWESSAGGSFTIKPDNSQPLGR 48
GFYSAYLVA+KVTV +KHNDDEQY WESSAGGSFT++ D +P+GR
Sbjct: 132 GFYSAYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTDTGEPMGR 177
>pdb|2XDU|A Chain A, Structre Of Hsp90 With Small Molecule Inhibitor Bound
Length = 236
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 35/46 (76%), Positives = 41/46 (89%)
Query: 3 GFYSAYLVADKVTVTSKHNDDEQYIWESSAGGSFTIKPDNSQPLGR 48
GFYSAYLVA+KVTV +KHNDDEQY WESSAGGSFT++ D +P+GR
Sbjct: 149 GFYSAYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTDTGEPMGR 194
>pdb|1USU|A Chain A, The Structure Of The Complex Between Aha1 And Hsp90
Length = 260
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 50/66 (75%)
Query: 85 YVARMKENQKQIYYITGETKDQVANSSFVERVKKRGFEVIYMTEPIDEYVVQQLKDYDGK 144
YV RM E+QK IYYITGE+ V S F++ +K + FEV+++T+PIDEY QLK+++GK
Sbjct: 190 YVTRMPEHQKNIYYITGESLKSVEKSPFLDALKAKNFEVLFLTDPIDEYAFTQLKEFEGK 249
Query: 145 TLVSVT 150
TLV +T
Sbjct: 250 TLVDIT 255
>pdb|1UYM|A Chain A, Human Hsp90-Beta With Pu3
(9-Butyl-8(3,4,5-Trimethoxy-Benzyl)-9h-Purin-6-Ylamine)
Length = 220
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 34/46 (73%), Positives = 41/46 (89%)
Query: 3 GFYSAYLVADKVTVTSKHNDDEQYIWESSAGGSFTIKPDNSQPLGR 48
GFYSAYLVA+KV V +KHNDDEQY WESSAGGSFT++ D+ +P+GR
Sbjct: 131 GFYSAYLVAEKVVVITKHNDDEQYAWESSAGGSFTVRADHGEPIGR 176
>pdb|1USV|A Chain A, The Structure Of The Complex Between Aha1 And Hsp90
pdb|1USV|C Chain C, The Structure Of The Complex Between Aha1 And Hsp90
pdb|1USV|E Chain E, The Structure Of The Complex Between Aha1 And Hsp90
pdb|1USV|G Chain G, The Structure Of The Complex Between Aha1 And Hsp90
Length = 260
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 50/66 (75%)
Query: 85 YVARMKENQKQIYYITGETKDQVANSSFVERVKKRGFEVIYMTEPIDEYVVQQLKDYDGK 144
YV RM E+QK IYYITGE+ V S F++ +K + FEV+++T+PIDEY QLK+++GK
Sbjct: 190 YVTRMPEHQKNIYYITGESLKAVEKSPFLDALKAKNFEVLFLTDPIDEYAFTQLKEFEGK 249
Query: 145 TLVSVT 150
TLV +T
Sbjct: 250 TLVDIT 255
>pdb|1HK7|A Chain A, Middle Domain Of Hsp90
pdb|1HK7|B Chain B, Middle Domain Of Hsp90
Length = 288
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 50/66 (75%)
Query: 85 YVARMKENQKQIYYITGETKDQVANSSFVERVKKRGFEVIYMTEPIDEYVVQQLKDYDGK 144
YV RM E+QK IYYITGE+ V S F++ +K + FEV+++T+PIDEY QLK+++GK
Sbjct: 188 YVTRMPEHQKNIYYITGESLKAVEKSPFLDALKAKNFEVLFLTDPIDEYAFTQLKEFEGK 247
Query: 145 TLVSVT 150
TLV +T
Sbjct: 248 TLVDIT 253
>pdb|3NMQ|A Chain A, Hsp90b N-Terminal Domain In Complex With Ec44, A
Pyrrolo-Pyrimidine Methoxypyridine Inhibitor
Length = 239
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 34/46 (73%), Positives = 41/46 (89%)
Query: 3 GFYSAYLVADKVTVTSKHNDDEQYIWESSAGGSFTIKPDNSQPLGR 48
GFYSAYLVA+KV V +KHNDDEQY WESSAGGSFT++ D+ +P+GR
Sbjct: 136 GFYSAYLVAEKVVVITKHNDDEQYAWESSAGGSFTVRADHGEPIGR 181
>pdb|2XJJ|A Chain A, Structre Of Hsp90 With Small Molecule Inhibitor Bound
pdb|2XJJ|B Chain B, Structre Of Hsp90 With Small Molecule Inhibitor Bound
Length = 249
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 34/46 (73%), Positives = 40/46 (86%)
Query: 3 GFYSAYLVADKVTVTSKHNDDEQYIWESSAGGSFTIKPDNSQPLGR 48
GFYSAYLVA+KVTV +KHNDD QY WESSAGGSFT++ D +P+GR
Sbjct: 150 GFYSAYLVAEKVTVITKHNDDVQYAWESSAGGSFTVRTDTGEPMGR 195
>pdb|2O1W|A Chain A, Structure Of N-Terminal Plus Middle Domains (N+m) Of Grp94
pdb|2O1W|B Chain B, Structure Of N-Terminal Plus Middle Domains (N+m) Of Grp94
pdb|2O1W|C Chain C, Structure Of N-Terminal Plus Middle Domains (N+m) Of Grp94
pdb|2O1W|D Chain D, Structure Of N-Terminal Plus Middle Domains (N+m) Of Grp94
pdb|2O1W|E Chain E, Structure Of N-Terminal Plus Middle Domains (N+m) Of Grp94
Length = 506
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 49/65 (75%)
Query: 85 YVARMKENQKQIYYITGETKDQVANSSFVERVKKRGFEVIYMTEPIDEYVVQQLKDYDGK 144
YV RMKE Q +IY++ G ++ + +S FVER+ K+G+EVIY+TEP+DEY +Q L ++DGK
Sbjct: 439 YVERMKEKQDKIYFMAGSSRKEAESSPFVERLLKKGYEVIYLTEPVDEYCIQALPEFDGK 498
Query: 145 TLVSV 149
+V
Sbjct: 499 RFQNV 503
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/46 (58%), Positives = 31/46 (67%)
Query: 3 GFYSAYLVADKVTVTSKHNDDEQYIWESSAGGSFTIKPDNSQPLGR 48
GFYSA+LVADKV VTSKHN+D Q+IWES + I LGR
Sbjct: 147 GFYSAFLVADKVIVTSKHNNDTQHIWESDSNEFSVIADPRGNTLGR 192
>pdb|2JKI|A Chain A, Complex Of Hsp90 N-terminal And Sgt1 Cs Domain
pdb|2JKI|B Chain B, Complex Of Hsp90 N-terminal And Sgt1 Cs Domain
pdb|2JKI|C Chain C, Complex Of Hsp90 N-terminal And Sgt1 Cs Domain
Length = 223
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 34/47 (72%), Positives = 40/47 (85%), Gaps = 1/47 (2%)
Query: 3 GFYSAYLVADKVTVTSKHNDDEQYIWESSAGGSFTIKPDNS-QPLGR 48
GFYSAYLVA++V VT+KHNDDEQY+WES AGGSFT+ D S + LGR
Sbjct: 131 GFYSAYLVAERVVVTTKHNDDEQYVWESQAGGSFTVTRDTSGEQLGR 177
>pdb|2XCM|A Chain A, Complex Of Hsp90 N-Terminal, Sgt1 Cs And Rar1 Chord2
Domain
pdb|2XCM|B Chain B, Complex Of Hsp90 N-Terminal, Sgt1 Cs And Rar1 Chord2
Domain
Length = 214
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 34/47 (72%), Positives = 40/47 (85%), Gaps = 1/47 (2%)
Query: 3 GFYSAYLVADKVTVTSKHNDDEQYIWESSAGGSFTIKPDNS-QPLGR 48
GFYSAYLVA++V VT+KHNDDEQY+WES AGGSFT+ D S + LGR
Sbjct: 128 GFYSAYLVAERVVVTTKHNDDEQYVWESQAGGSFTVTRDTSGEQLGR 174
>pdb|3K60|A Chain A, Crystal Structure Of N-Terminal Domain Of Plasmodium
Falciparum Hsp90 (Pf07_0029) Bound To Adp
pdb|3K60|B Chain B, Crystal Structure Of N-Terminal Domain Of Plasmodium
Falciparum Hsp90 (Pf07_0029) Bound To Adp
Length = 223
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 33/47 (70%), Positives = 40/47 (85%), Gaps = 1/47 (2%)
Query: 3 GFYSAYLVADKVTVTSKHNDDEQYIWESSAGGSFTI-KPDNSQPLGR 48
GFYSAYLVAD V V SK+NDDEQY+WES+AGGSFT+ K + ++ LGR
Sbjct: 123 GFYSAYLVADHVVVISKNNDDEQYVWESAAGGSFTVTKDETNEKLGR 169
>pdb|4GQT|A Chain A, N-Terminal Domain Of C. Elegans Hsp90
pdb|4GQT|B Chain B, N-Terminal Domain Of C. Elegans Hsp90
Length = 227
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 31/46 (67%), Positives = 37/46 (80%)
Query: 3 GFYSAYLVADKVTVTSKHNDDEQYIWESSAGGSFTIKPDNSQPLGR 48
GFYSA+LVADKV VTSK+NDD+ Y WESSAGGSF ++P N + R
Sbjct: 128 GFYSAFLVADKVVVTSKNNDDDSYQWESSAGGSFVVRPFNDPEVTR 173
>pdb|3H80|A Chain A, Crystal Structure Of The Amino-Terminal Domain Of Hsp90
From Leishmania Major, Lmjf33.0312:m1-K213
pdb|3Q5J|A Chain A, Crystal Structure Of The Amino-Terminal Domain Of Hsp90
From Leishmania Major, Lmjf33.0312:m1-K213 In The
Presence Of 17-Dmap- Geldanamycin
pdb|3Q5K|A Chain A, Crystal Structure Of The Amino-Terminal Domain Of Hsp90
From Leishmania Major, Lmjf33.0312:m1-K213 In The
Presence Of An Inhibitor
pdb|3Q5L|A Chain A, Crystal Structure Of The Amino-Terminal Domain Of Hsp90
From Leishmania Major, Lmjf33.0312:m1-K 213 In The
Presence Of 17-Aep- Geldanamycin
pdb|3Q5L|B Chain B, Crystal Structure Of The Amino-Terminal Domain Of Hsp90
From Leishmania Major, Lmjf33.0312:m1-K 213 In The
Presence Of 17-Aep- Geldanamycin
pdb|3Q5L|C Chain C, Crystal Structure Of The Amino-Terminal Domain Of Hsp90
From Leishmania Major, Lmjf33.0312:m1-K 213 In The
Presence Of 17-Aep- Geldanamycin
pdb|3Q5L|D Chain D, Crystal Structure Of The Amino-Terminal Domain Of Hsp90
From Leishmania Major, Lmjf33.0312:m1-K 213 In The
Presence Of 17-Aep- Geldanamycin
pdb|3U67|A Chain A, Crystal Structure Of The N-Terminal Domain Of Hsp90 From
Leishmania Major(Lmjf33.0312)in Complex With Adp
Length = 231
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 30/36 (83%), Positives = 34/36 (94%)
Query: 3 GFYSAYLVADKVTVTSKHNDDEQYIWESSAGGSFTI 38
GFYSAYLVAD+VTVTSK+N DE Y+WESSAGG+FTI
Sbjct: 140 GFYSAYLVADRVTVTSKNNSDESYVWESSAGGTFTI 175
>pdb|1Y4S|A Chain A, Conformation Rearrangement Of Heat Shock Protein 90 Upon
Adp Binding
pdb|1Y4S|B Chain B, Conformation Rearrangement Of Heat Shock Protein 90 Upon
Adp Binding
pdb|1Y4U|A Chain A, Conformation Rearrangement Of Heat Shock Protein 90 Upon
Adp Binding
pdb|1Y4U|B Chain B, Conformation Rearrangement Of Heat Shock Protein 90 Upon
Adp Binding
Length = 559
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 71/138 (51%), Gaps = 1/138 (0%)
Query: 85 YVARMKENQKQIYYITGETKDQVANSSFVERVKKRGFEVIYMTEPIDEYVVQQLKDYDGK 144
YV+RMKE Q++IYYIT ++ +S +E ++K+G EV+ +++ IDE+++ L ++DGK
Sbjct: 419 YVSRMKEGQEKIYYITADSYAAAKSSPHLELLRKKGIEVLLLSDRIDEWMMNYLTEFDGK 478
Query: 145 TLVSVTXXXXXXXXXXXXXXXXXXXXXXXXN-LCKVMKDILDKKVEKVIVSNRLVDSPCC 203
SV+ +K +L ++V+ V +++RL D+P
Sbjct: 479 PFQSVSKVDESLEKLADEVDESAKEAEKALTPFIDRVKALLGERVKDVRLTHRLTDTPAI 538
Query: 204 IVTSQYGWTANMERIMKA 221
+ T + M ++ A
Sbjct: 539 VSTDADEMSTQMAKLFAA 556
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 25/39 (64%), Gaps = 3/39 (7%)
Query: 3 GFYSAYLVADKVTVTSK---HNDDEQYIWESSAGGSFTI 38
GFYSA++VADKVTV ++ + WES+ G +T+
Sbjct: 126 GFYSAFIVADKVTVRTRAAGEKPENGVFWESAGEGEYTV 164
>pdb|1US7|A Chain A, Complex Of Hsp90 And P50
pdb|2BRC|A Chain A, Structure Of A Hsp90 Inhibitor Bound To The N-Terminus Of
Yeast Hsp90.
pdb|2IWS|A Chain A, Radicicol Analogues Bound To The Atp Site Of Hsp90
pdb|2IWU|A Chain A, Analogues Of Radicicol Bound To The Atp-Binding Site Of
Hsp90
pdb|2IWX|A Chain A, Analogues Of Radicicol Bound To The Atp-Binding Site Of
Hsp90.
pdb|1AMW|A Chain A, Adp Binding Site In The Hsp90 Molecular Chaperone
pdb|2VW5|A Chain A, Structure Of The Hsp90 Inhibitor 7-O-Carbamoylpremacbecin
Bound To The N- Terminus Of Yeast Hsp90
pdb|2VW5|B Chain B, Structure Of The Hsp90 Inhibitor 7-O-Carbamoylpremacbecin
Bound To The N- Terminus Of Yeast Hsp90
pdb|2VW5|C Chain C, Structure Of The Hsp90 Inhibitor 7-O-Carbamoylpremacbecin
Bound To The N- Terminus Of Yeast Hsp90
pdb|2VW5|D Chain D, Structure Of The Hsp90 Inhibitor 7-O-Carbamoylpremacbecin
Bound To The N- Terminus Of Yeast Hsp90
pdb|2XD6|A Chain A, Hsp90 Complexed With A Resorcylic Acid Macrolactone.
pdb|2XX4|A Chain A, Macrolactone Inhibitor Bound To Hsp90 N-Term
pdb|2XX5|A Chain A, Macrolactone Inhibitor Bound To Hsp90 N-Term
Length = 214
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 31/47 (65%), Positives = 38/47 (80%), Gaps = 1/47 (2%)
Query: 3 GFYSAYLVADKVTVTSKHNDDEQYIWESSAGGSFTIKPDN-SQPLGR 48
GFYS +LVAD+V V SK NDDEQYIWES+AGGSFT+ D ++ +GR
Sbjct: 123 GFYSLFLVADRVQVISKSNDDEQYIWESNAGGSFTVTLDEVNERIGR 169
>pdb|2BRE|A Chain A, Structure Of A Hsp90 Inhibitor Bound To The N-Terminus Of
Yeast Hsp90.
pdb|2BRE|B Chain B, Structure Of A Hsp90 Inhibitor Bound To The N-Terminus Of
Yeast Hsp90.
pdb|2VWC|A Chain A, Structure Of The Hsp90 Inhibitor Macbecin Bound To The N-
Terminus Of Yeast Hsp90
Length = 219
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 31/47 (65%), Positives = 38/47 (80%), Gaps = 1/47 (2%)
Query: 3 GFYSAYLVADKVTVTSKHNDDEQYIWESSAGGSFTIKPDN-SQPLGR 48
GFYS +LVAD+V V SK NDDEQYIWES+AGGSFT+ D ++ +GR
Sbjct: 123 GFYSLFLVADRVQVISKSNDDEQYIWESNAGGSFTVTLDEVNERIGR 169
>pdb|2XX2|A Chain A, Macrolactone Inhibitor Bound To Hsp90 N-Term
pdb|2XX2|B Chain B, Macrolactone Inhibitor Bound To Hsp90 N-Term
pdb|2XX2|C Chain C, Macrolactone Inhibitor Bound To Hsp90 N-Term
pdb|2XX2|D Chain D, Macrolactone Inhibitor Bound To Hsp90 N-Term
Length = 214
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 31/47 (65%), Positives = 38/47 (80%), Gaps = 1/47 (2%)
Query: 3 GFYSAYLVADKVTVTSKHNDDEQYIWESSAGGSFTIKPDN-SQPLGR 48
GFYS +LVAD+V V SK NDDEQYIWES+AGGSFT+ D ++ +GR
Sbjct: 123 GFYSLFLVADRVQVISKSNDDEQYIWESNAGGSFTVTLDEVNERIGR 169
>pdb|1AM1|A Chain A, Atp Binding Site In The Hsp90 Molecular Chaperone
Length = 213
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 31/47 (65%), Positives = 38/47 (80%), Gaps = 1/47 (2%)
Query: 3 GFYSAYLVADKVTVTSKHNDDEQYIWESSAGGSFTIKPDN-SQPLGR 48
GFYS +LVAD+V V SK NDDEQYIWES+AGGSFT+ D ++ +GR
Sbjct: 122 GFYSLFLVADRVQVISKSNDDEQYIWESNAGGSFTVTLDEVNERIGR 168
>pdb|1BGQ|A Chain A, Radicicol Bound To The Atp Binding Site Of The N-Terminal
Domain Of The Yeast Hsp90 Chaperone
Length = 225
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 31/47 (65%), Positives = 38/47 (80%), Gaps = 1/47 (2%)
Query: 3 GFYSAYLVADKVTVTSKHNDDEQYIWESSAGGSFTIKPDN-SQPLGR 48
GFYS +LVAD+V V SK NDDEQYIWES+AGGSFT+ D ++ +GR
Sbjct: 134 GFYSLFLVADRVQVISKSNDDEQYIWESNAGGSFTVTLDEVNERIGR 180
>pdb|2CGF|A Chain A, A Radicicol Analogue Bound To The Atp Binding Site Of The
N- Terminal Domain Of The Yeast Hsp90 Chaperone
Length = 225
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 31/47 (65%), Positives = 38/47 (80%), Gaps = 1/47 (2%)
Query: 3 GFYSAYLVADKVTVTSKHNDDEQYIWESSAGGSFTIKPDN-SQPLGR 48
GFYS +LVAD+V V SK NDDEQYIWES+AGGSFT+ D ++ +GR
Sbjct: 134 GFYSLFLVADRVQVISKSNDDEQYIWESNAGGSFTVTLDEVNERIGR 180
>pdb|1A4H|A Chain A, Structure Of The N-Terminal Domain Of The Yeast Hsp90
Chaperone In Complex With Geldanamycin
Length = 230
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 31/47 (65%), Positives = 38/47 (80%), Gaps = 1/47 (2%)
Query: 3 GFYSAYLVADKVTVTSKHNDDEQYIWESSAGGSFTIKPDN-SQPLGR 48
GFYS +LVAD+V V SK NDDEQYIWES+AGGSFT+ D ++ +GR
Sbjct: 133 GFYSLFLVADRVQVISKSNDDEQYIWESNAGGSFTVTLDEVNERIGR 179
>pdb|1AH8|A Chain A, Structure Of The Orthorhombic Form Of The N-Terminal
Domain Of The Yeast Hsp90 Chaperone
pdb|1AH8|B Chain B, Structure Of The Orthorhombic Form Of The N-Terminal
Domain Of The Yeast Hsp90 Chaperone
pdb|1AH6|A Chain A, Structure Of The Tetragonal Form Of The N-Terminal Domain
Of The Yeast Hsp90 Chaperone
Length = 220
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 31/47 (65%), Positives = 38/47 (80%), Gaps = 1/47 (2%)
Query: 3 GFYSAYLVADKVTVTSKHNDDEQYIWESSAGGSFTIKPDN-SQPLGR 48
GFYS +LVAD+V V SK NDDEQYIWES+AGGSFT+ D ++ +GR
Sbjct: 123 GFYSLFLVADRVQVISKSNDDEQYIWESNAGGSFTVTLDEVNERIGR 169
>pdb|2YGE|A Chain A, E88g-n92l Mutant Of N-term Hsp90 Complexed With
Geldanamycin
Length = 220
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 31/47 (65%), Positives = 38/47 (80%), Gaps = 1/47 (2%)
Query: 3 GFYSAYLVADKVTVTSKHNDDEQYIWESSAGGSFTIKPDN-SQPLGR 48
GFYS +LVAD+V V SK NDDEQYIWES+AGGSFT+ D ++ +GR
Sbjct: 123 GFYSLFLVADRVQVISKSNDDEQYIWESNAGGSFTVTLDEVNERIGR 169
>pdb|2YGA|A Chain A, E88g-n92l Mutant Of N-term Hsp90 Complexed With
Geldanamycin
Length = 220
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 31/47 (65%), Positives = 38/47 (80%), Gaps = 1/47 (2%)
Query: 3 GFYSAYLVADKVTVTSKHNDDEQYIWESSAGGSFTIKPDN-SQPLGR 48
GFYS +LVAD+V V SK NDDEQYIWES+AGGSFT+ D ++ +GR
Sbjct: 123 GFYSLFLVADRVQVISKSNDDEQYIWESNAGGSFTVTLDEVNERIGR 169
>pdb|2WEP|A Chain A, Yeast Hsp90 N-Terminal Domain Li-Iv Mutant With Adp
pdb|2WEQ|A Chain A, Yeast Hsp90 N-Terminal Domain Li-Iv Mutant With
Geldanamycin
pdb|2WER|A Chain A, Yeast Hsp90 N-Terminal Domain Li-Iv Mutant With Radicicol
pdb|2WER|B Chain B, Yeast Hsp90 N-Terminal Domain Li-Iv Mutant With Radicicol
Length = 220
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 31/47 (65%), Positives = 38/47 (80%), Gaps = 1/47 (2%)
Query: 3 GFYSAYLVADKVTVTSKHNDDEQYIWESSAGGSFTIKPDN-SQPLGR 48
GFYS +LVAD+V V SK NDDEQYIWES+AGGSFT+ D ++ +GR
Sbjct: 123 GFYSLFLVADRVQVISKSNDDEQYIWESNAGGSFTVTLDEVNERIGR 169
>pdb|3C0E|A Chain A, Yeast Hsp82 N-Terminal Domain: Effects Of Mutants 98-99
Ks- Aa
pdb|3C11|A Chain A, Yeast Hsp82 N-Terminal Domain-Geldanamycin Complex:
Effects Of Mutants 98-99 Ks-Aa
Length = 240
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 31/47 (65%), Positives = 38/47 (80%), Gaps = 1/47 (2%)
Query: 3 GFYSAYLVADKVTVTSKHNDDEQYIWESSAGGSFTIKPDN-SQPLGR 48
GFYS +LVAD+V V SK NDDEQYIWES+AGGSFT+ D ++ +GR
Sbjct: 143 GFYSLFLVADRVQVISKSNDDEQYIWESNAGGSFTVTLDEVNERIGR 189
>pdb|1ZW9|A Chain A, Yeast Hsp82 In Complex With The Novel Hsp90 Inhibitor
8-(6-Bromo-
Benzo[1,
3]dioxol-5-Ylsulfanyl)-9-(3-Isopropylamino-Propyl)-
Adenine
pdb|1ZWH|A Chain A, Yeast Hsp82 In Complex With The Novel Hsp90 Inhibitor
Radester Amine
pdb|2FXS|A Chain A, Yeast Hsp82 In Complex With The Novel Hsp90 Inhibitor
Radamide
Length = 240
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 31/47 (65%), Positives = 38/47 (80%), Gaps = 1/47 (2%)
Query: 3 GFYSAYLVADKVTVTSKHNDDEQYIWESSAGGSFTIKPDN-SQPLGR 48
GFYS +LVAD+V V SK NDDEQYIWES+AGGSFT+ D ++ +GR
Sbjct: 143 GFYSLFLVADRVQVISKSNDDEQYIWESNAGGSFTVTLDEVNERIGR 189
>pdb|2AKP|A Chain A, Hsp90 Delta24-n210 Mutant
pdb|2AKP|B Chain B, Hsp90 Delta24-n210 Mutant
Length = 186
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 31/47 (65%), Positives = 38/47 (80%), Gaps = 1/47 (2%)
Query: 3 GFYSAYLVADKVTVTSKHNDDEQYIWESSAGGSFTIKPDN-SQPLGR 48
GFYS +LVAD+V V SK NDDEQYIWES+AGGSFT+ D ++ +GR
Sbjct: 99 GFYSLFLVADRVQVISKSNDDEQYIWESNAGGSFTVTLDEVNERIGR 145
>pdb|2YGF|A Chain A, L89v, L93i And V136m Mutant Of N-term Hsp90 Complexed With
Geldanamycin
Length = 220
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 30/47 (63%), Positives = 38/47 (80%), Gaps = 1/47 (2%)
Query: 3 GFYSAYLVADKVTVTSKHNDDEQYIWESSAGGSFTIKPDN-SQPLGR 48
GFYS +LVAD+V + SK NDDEQYIWES+AGGSFT+ D ++ +GR
Sbjct: 123 GFYSLFLVADRVQMISKSNDDEQYIWESNAGGSFTVTLDEVNERIGR 169
>pdb|3O6O|A Chain A, Crystal Structure Of The N-Terminal Domain Of An Hsp90
From Trypanosoma Brucei, Tb10.26.1080 In The Presence Of
An The Inhibitor Biib021
pdb|3O6O|B Chain B, Crystal Structure Of The N-Terminal Domain Of An Hsp90
From Trypanosoma Brucei, Tb10.26.1080 In The Presence Of
An The Inhibitor Biib021
Length = 214
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 29/41 (70%), Positives = 35/41 (85%), Gaps = 2/41 (4%)
Query: 3 GFYSAYLVADKVTVTSKHNDDEQYIWESSAGGSFTI--KPD 41
GFYSAYLVAD+VTV SK+N+D+ Y WESSAGG+FT+ PD
Sbjct: 123 GFYSAYLVADRVTVVSKNNEDDAYTWESSAGGTFTVTSTPD 163
>pdb|3OPD|A Chain A, Crystal Structure Of The N-Terminal Domain Of An Hsp90
From Trypanosoma Brucei, Tb10.26.1080 In The Presence Of
A Benzamide Derivative
pdb|3OPD|B Chain B, Crystal Structure Of The N-Terminal Domain Of An Hsp90
From Trypanosoma Brucei, Tb10.26.1080 In The Presence Of
A Benzamide Derivative
pdb|3OPD|C Chain C, Crystal Structure Of The N-Terminal Domain Of An Hsp90
From Trypanosoma Brucei, Tb10.26.1080 In The Presence Of
A Benzamide Derivative
pdb|3OMU|A Chain A, Crystal Structure Of The N-Terminal Domain Of An Hsp90
From Trypanosoma Brucei, Tb10.26.1080 In The Presence Of
A Thienopyrimidine Derivative
pdb|3OMU|B Chain B, Crystal Structure Of The N-Terminal Domain Of An Hsp90
From Trypanosoma Brucei, Tb10.26.1080 In The Presence Of
A Thienopyrimidine Derivative
Length = 231
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 29/41 (70%), Positives = 35/41 (85%), Gaps = 2/41 (4%)
Query: 3 GFYSAYLVADKVTVTSKHNDDEQYIWESSAGGSFTI--KPD 41
GFYSAYLVAD+VTV SK+N+D+ Y WESSAGG+FT+ PD
Sbjct: 140 GFYSAYLVADRVTVVSKNNEDDAYTWESSAGGTFTVTSTPD 180
>pdb|3PEH|A Chain A, Crystal Structure Of The N-Terminal Domain Of An Hsp90
From Plasmodium Falciparum, Pfl1070c In The Presence Of
A Thienopyrimidine Derivative
pdb|3PEH|B Chain B, Crystal Structure Of The N-Terminal Domain Of An Hsp90
From Plasmodium Falciparum, Pfl1070c In The Presence Of
A Thienopyrimidine Derivative
pdb|3PEJ|A Chain A, Crystal Structure Of The N-Terminal Domain Of An Hsp90
From Plasmodium Falciparum, Pfl1070c In The Presence Of
Macbecin
pdb|3PEJ|B Chain B, Crystal Structure Of The N-Terminal Domain Of An Hsp90
From Plasmodium Falciparum, Pfl1070c In The Presence Of
Macbecin
Length = 281
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 28/39 (71%), Positives = 32/39 (82%)
Query: 3 GFYSAYLVADKVTVTSKHNDDEQYIWESSAGGSFTIKPD 41
GFYSA+LVADKV V +K+NDDEQYIWES+A FTI D
Sbjct: 144 GFYSAFLVADKVIVYTKNNDDEQYIWESTADAKFTIYKD 182
>pdb|2GQ0|A Chain A, Crystal Structure Of The Middle Domain Of Htpg, The E.
Coli Hsp90
pdb|2GQ0|B Chain B, Crystal Structure Of The Middle Domain Of Htpg, The E.
Coli Hsp90
Length = 303
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 47/66 (71%)
Query: 85 YVARMKENQKQIYYITGETKDQVANSSFVERVKKRGFEVIYMTEPIDEYVVQQLKDYDGK 144
YV+RMKE Q++IYYIT ++ +S +E ++K+G EV+ +++ IDE+++ L ++DGK
Sbjct: 191 YVSRMKEGQEKIYYITADSYAAAKSSPHLELLRKKGIEVLLLSDRIDEWMMNYLTEFDGK 250
Query: 145 TLVSVT 150
SV+
Sbjct: 251 PFQSVS 256
>pdb|1QY5|A Chain A, Crystal Structure Of The N-Domain Of The Er Hsp90
Chaperone Grp94 In Complex With The Specific Ligand Neca
pdb|1QY8|A Chain A, Crystal Structure Of The N-domain Of The Er Hsp90
Chaperone Grp94 In Complex With Radicicol
pdb|1QYE|A Chain A, Crystal Structure Of The N-domain Of The Er Hsp90
Chaperone Grp94 In Complex With 2-chlorodideoxyadenosine
Length = 269
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 27/46 (58%), Positives = 31/46 (67%)
Query: 3 GFYSAYLVADKVTVTSKHNDDEQYIWESSAGGSFTIKPDNSQPLGR 48
GFYSA+LVADKV VTSKHN+D Q+IWES + I LGR
Sbjct: 130 GFYSAFLVADKVIVTSKHNNDTQHIWESDSNEFSVIADPRGNTLGR 175
>pdb|1U0Y|A Chain A, N-Domain Of Grp94, With The Charged Domain, In Complex
With The Novel Ligand N-Propyl Carboxyamido Adenosine
pdb|1YT2|A Chain A, Crystal Structure Of The Unliganded Form Of Grp94, The Er
Hsp90: Basis For Nucleotide-Induced Conformational
Change, Grp94n Apo Crystal
Length = 273
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 27/46 (58%), Positives = 31/46 (67%)
Query: 3 GFYSAYLVADKVTVTSKHNDDEQYIWESSAGGSFTIKPDNSQPLGR 48
GFYSA+LVADKV VTSKHN+D Q+IWES + I LGR
Sbjct: 134 GFYSAFLVADKVIVTSKHNNDTQHIWESDSNEFSVIADPRGNTLGR 179
>pdb|1U2O|A Chain A, Crystal Structure Of The N-Domain Of Grp94 Lacking The
Charged Domain In Complex With Neca
pdb|1U2O|B Chain B, Crystal Structure Of The N-Domain Of Grp94 Lacking The
Charged Domain In Complex With Neca
pdb|1TBW|A Chain A, Ligand Induced Conformational Shift In The N-Terminal
Domain Of Grp94, Open Conformation
pdb|1TBW|B Chain B, Ligand Induced Conformational Shift In The N-Terminal
Domain Of Grp94, Open Conformation
pdb|1TC0|A Chain A, Ligand Induced Conformational Shifts In The N-Terminal
Domain Of Grp94, Open Conformation Complexed With The
Physiological Partner Atp
pdb|1TC0|B Chain B, Ligand Induced Conformational Shifts In The N-Terminal
Domain Of Grp94, Open Conformation Complexed With The
Physiological Partner Atp
pdb|1TC6|A Chain A, Ligand Induced Conformational Shift In The N-Terminal
Domain Of Grp94, Open Conformation Adp-Complex
pdb|1TC6|B Chain B, Ligand Induced Conformational Shift In The N-Terminal
Domain Of Grp94, Open Conformation Adp-Complex
pdb|1U0Z|A Chain A, N-Domain Of Grp94 Lacking The Charged Domain In Complex
With Radicicol
pdb|1U0Z|B Chain B, N-Domain Of Grp94 Lacking The Charged Domain In Complex
With Radicicol
pdb|1YSZ|A Chain A, Crystal Structure Of The Unliganded Form Of Grp94, The Er
Hsp90: Basis For Nucleotide-Induced Conformational
Change, Grp94n(Delta)41 Apo Crystal Soaked With Neca
pdb|1YT0|A Chain A, Crystal Structure Of The Unliganded Form Of Grp94, The Er
Hsp90: Basis For Nucleotide-Induced Conformational
Change, Grp94n(Delta)41 Apo Crystal Soaked With Adp
pdb|1YT1|A Chain A, Crystal Structure Of The Unliganded Form Of Grp94, The Er
Hsp90: Basis For Nucleotide-Induced Conformational
Change, Grp94n(Delta)41 Apo Crystal
pdb|1YT1|B Chain B, Crystal Structure Of The Unliganded Form Of Grp94, The Er
Hsp90: Basis For Nucleotide-Induced Conformational
Change, Grp94n(Delta)41 Apo Crystal
pdb|2EXL|A Chain A, Grp94 N-Terminal Domain Bound To Geldanamycin
pdb|2EXL|B Chain B, Grp94 N-Terminal Domain Bound To Geldanamycin
pdb|2FYP|A Chain A, Grp94 In Complex With The Novel Hsp90 Inhibitor Radester
Amine
pdb|2FYP|B Chain B, Grp94 In Complex With The Novel Hsp90 Inhibitor Radester
Amine
pdb|2GFD|A Chain A, Grp94 In Complex With The Novel Hsp90 Inhibitor Radamide
pdb|2GFD|B Chain B, Grp94 In Complex With The Novel Hsp90 Inhibitor Radamide
pdb|2GQP|A Chain A, N-Domain Of Grp94 In Complex With The Novel Ligand
N-Propyl Carboxyamido Adenosine
pdb|2GQP|B Chain B, N-Domain Of Grp94 In Complex With The Novel Ligand
N-Propyl Carboxyamido Adenosine
pdb|2HCH|A Chain A, N-Domain Of Grp94 In Complex With The Novel Ligand N-(2-
Amino)ethyl Carboxyamido Adenosine
pdb|2HCH|B Chain B, N-Domain Of Grp94 In Complex With The Novel Ligand N-(2-
Amino)ethyl Carboxyamido Adenosine
pdb|2H8M|A Chain A, N-Domain Of Grp94 In Complex With The 2-Iodo-Neca
pdb|2H8M|B Chain B, N-Domain Of Grp94 In Complex With The 2-Iodo-Neca
pdb|2HG1|A Chain A, N-Domain Of Grp94 In Complex With The Novel Ligand N-(2-
Hydroxyl)ethyl Carboxyamido Adenosine
pdb|2HG1|B Chain B, N-Domain Of Grp94 In Complex With The Novel Ligand N-(2-
Hydroxyl)ethyl Carboxyamido Adenosine
pdb|3O2F|A Chain A, Structure Of The N-Domain Of Grp94 Bound To The Hsp90
Inhibitor Pu-H54
pdb|3O2F|B Chain B, Structure Of The N-Domain Of Grp94 Bound To The Hsp90
Inhibitor Pu-H54
Length = 236
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 27/46 (58%), Positives = 31/46 (67%)
Query: 3 GFYSAYLVADKVTVTSKHNDDEQYIWESSAGGSFTIKPDNSQPLGR 48
GFYSA+LVADKV VTSKHN+D Q+IWES + I LGR
Sbjct: 134 GFYSAFLVADKVIVTSKHNNDTQHIWESDSNEFSVIADPRGNTLGR 179
>pdb|2ESA|A Chain A, Grp94 N-Terminal Domain Bound To Geldanamycin: Effects Of
Mutants 168- 169 Ks-Aa
Length = 236
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 27/46 (58%), Positives = 31/46 (67%)
Query: 3 GFYSAYLVADKVTVTSKHNDDEQYIWESSAGGSFTIKPDNSQPLGR 48
GFYSA+LVADKV VTSKHN+D Q+IWES + I LGR
Sbjct: 134 GFYSAFLVADKVIVTSKHNNDTQHIWESDSNEFSVIADPRGNTLGR 179
>pdb|1Y6Z|A Chain A, Middle Domain Of Plasmodium Falciparum Putative Heat Shock
Protein Pf14_0417
pdb|1Y6Z|B Chain B, Middle Domain Of Plasmodium Falciparum Putative Heat Shock
Protein Pf14_0417
Length = 263
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 36/54 (66%)
Query: 85 YVARMKENQKQIYYITGETKDQVANSSFVERVKKRGFEVIYMTEPIDEYVVQQL 138
Y+ MKE+QK IYYI+GE K NS +E++K ++V++ EPIDE+ + L
Sbjct: 193 YIENMKEDQKCIYYISGENKKTAQNSPSLEKLKALNYDVLFSLEPIDEFCLSSL 246
>pdb|2IOR|A Chain A, Crystal Structure Of The N-Terminal Domain Of Htpg, The
Escherichia Coli Hsp90, Bound To Adp
Length = 235
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 25/39 (64%), Gaps = 3/39 (7%)
Query: 3 GFYSAYLVADKVTVTSK---HNDDEQYIWESSAGGSFTI 38
GFYSA++VADKVTV ++ + WES+ G +T+
Sbjct: 146 GFYSAFIVADKVTVRTRAAGEKPENGVFWESAGEGEYTV 184
>pdb|3IED|A Chain A, Crystal Structure Of N-Terminal Domain Of Plasmodium
Falciparum Hsp90 (Pf14_0417) In Complex With Amppn
Length = 272
Score = 37.0 bits (84), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 26/36 (72%), Gaps = 1/36 (2%)
Query: 3 GFYSAYLVADKVTVTSKHNDDEQYIWESSAGGSFTI 38
GFYS++LV+++V V +K +D+ Y W S GSF++
Sbjct: 181 GFYSSFLVSNRVEVYTKK-EDQIYRWSSDLKGSFSV 215
>pdb|4H2C|A Chain A, Trehalulose Synthase Mutb R284c Mutant
Length = 557
Score = 30.8 bits (68), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 13/55 (23%), Positives = 27/55 (49%)
Query: 226 DTSTMGYMAAKKHLEINPDHSIVETLRQXXXXXXXXXXXXXLVNLLFETSLLSSG 280
D++ G+ K L++NP+++ + R+ L+++ ET LS+G
Sbjct: 425 DSANAGFTTGKPWLKVNPNYTEINAAREIGDPKSVYSFYRNLISIRHETPALSTG 479
>pdb|2PWG|A Chain A, Crystal Structure Of The Trehalulose Synthase Mutb From
Pseudomonas Mesoacidophila Mx-45 Complexed To The
Inhibitor Castanospermine
pdb|2PWG|B Chain B, Crystal Structure Of The Trehalulose Synthase Mutb From
Pseudomonas Mesoacidophila Mx-45 Complexed To The
Inhibitor Castanospermine
pdb|2PWH|A Chain A, Crystal Structure Of The Trehalulose Synthase Mutb From
Pseudomonas Mesoacidophila Mx-45
pdb|2PWH|B Chain B, Crystal Structure Of The Trehalulose Synthase Mutb From
Pseudomonas Mesoacidophila Mx-45
Length = 556
Score = 30.8 bits (68), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 13/55 (23%), Positives = 27/55 (49%)
Query: 226 DTSTMGYMAAKKHLEINPDHSIVETLRQXXXXXXXXXXXXXLVNLLFETSLLSSG 280
D++ G+ K L++NP+++ + R+ L+++ ET LS+G
Sbjct: 424 DSANAGFTTGKPWLKVNPNYTEINAAREIGDPKSVYSFYRNLISIRHETPALSTG 478
>pdb|2PWF|A Chain A, Crystal Structure Of The Mutb D200a Mutant In Complex With
Glucose
pdb|2PWF|B Chain B, Crystal Structure Of The Mutb D200a Mutant In Complex With
Glucose
pdb|2PWF|C Chain C, Crystal Structure Of The Mutb D200a Mutant In Complex With
Glucose
pdb|2PWF|D Chain D, Crystal Structure Of The Mutb D200a Mutant In Complex With
Glucose
Length = 556
Score = 30.8 bits (68), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 13/55 (23%), Positives = 27/55 (49%)
Query: 226 DTSTMGYMAAKKHLEINPDHSIVETLRQXXXXXXXXXXXXXLVNLLFETSLLSSG 280
D++ G+ K L++NP+++ + R+ L+++ ET LS+G
Sbjct: 424 DSANAGFTTGKPWLKVNPNYTEINAAREIGDPKSVYSFYRNLISIRHETPALSTG 478
>pdb|2PWE|A Chain A, Crystal Structure Of The Mutb E254q Mutant In Complex With
The Substrate Sucrose
pdb|2PWE|B Chain B, Crystal Structure Of The Mutb E254q Mutant In Complex With
The Substrate Sucrose
Length = 556
Score = 30.8 bits (68), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 13/55 (23%), Positives = 27/55 (49%)
Query: 226 DTSTMGYMAAKKHLEINPDHSIVETLRQXXXXXXXXXXXXXLVNLLFETSLLSSG 280
D++ G+ K L++NP+++ + R+ L+++ ET LS+G
Sbjct: 424 DSANAGFTTGKPWLKVNPNYTEINAAREIGDPKSVYSFYRNLISIRHETPALSTG 478
>pdb|1ZJA|A Chain A, Crystal Structure Of The Trehalulose Synthase Mutb From
Pseudomonas Mesoacidophila Mx-45 (Triclinic Form)
pdb|1ZJA|B Chain B, Crystal Structure Of The Trehalulose Synthase Mutb From
Pseudomonas Mesoacidophila Mx-45 (Triclinic Form)
pdb|1ZJB|A Chain A, Crystal Structure Of The Trehalulose Synthase Mutb From
Pseudomonas Mesoacidophila Mx-45 (Monoclinic Form)
pdb|1ZJB|B Chain B, Crystal Structure Of The Trehalulose Synthase Mutb From
Pseudomonas Mesoacidophila Mx-45 (Monoclinic Form)
pdb|2PWD|A Chain A, Crystal Structure Of The Trehalulose Synthase Mutb From
Pseudomonas Mesoacidophila Mx-45 Complexed To The
Inhibitor Deoxynojirmycin
pdb|2PWD|B Chain B, Crystal Structure Of The Trehalulose Synthase Mutb From
Pseudomonas Mesoacidophila Mx-45 Complexed To The
Inhibitor Deoxynojirmycin
Length = 557
Score = 30.8 bits (68), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 13/55 (23%), Positives = 27/55 (49%)
Query: 226 DTSTMGYMAAKKHLEINPDHSIVETLRQXXXXXXXXXXXXXLVNLLFETSLLSSG 280
D++ G+ K L++NP+++ + R+ L+++ ET LS+G
Sbjct: 425 DSANAGFTTGKPWLKVNPNYTEINAAREIGDPKSVYSFYRNLISIRHETPALSTG 479
>pdb|4GI6|A Chain A, Crystal Structure Of The Mutb F164l Mutant In Complex With
Glucose
pdb|4GI6|B Chain B, Crystal Structure Of The Mutb F164l Mutant In Complex With
Glucose
pdb|4GI8|A Chain A, Crystal Structure Of The Mutb F164l Mutant From Crystals
Soaked With The Substrate Sucrose
pdb|4GI8|B Chain B, Crystal Structure Of The Mutb F164l Mutant From Crystals
Soaked With The Substrate Sucrose
pdb|4GI9|A Chain A, Crystal Structure Of The Mutb F164l Mutant From Crystals
Soaked With Trehalulose
pdb|4GI9|B Chain B, Crystal Structure Of The Mutb F164l Mutant From Crystals
Soaked With Trehalulose
pdb|4GIA|A Chain A, Crystal Structure Of The Mutb F164l Mutant From Crystals
Soaked With Isomaltulose
pdb|4GIA|B Chain B, Crystal Structure Of The Mutb F164l Mutant From Crystals
Soaked With Isomaltulose
Length = 557
Score = 30.4 bits (67), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 13/55 (23%), Positives = 27/55 (49%)
Query: 226 DTSTMGYMAAKKHLEINPDHSIVETLRQXXXXXXXXXXXXXLVNLLFETSLLSSG 280
D++ G+ K L++NP+++ + R+ L+++ ET LS+G
Sbjct: 425 DSANAGFTTGKPWLKVNPNYTEINAAREIGDPKSVYSFYRNLISIRHETPALSTG 479
>pdb|4GIN|A Chain A, Crystal Structure Of The Mutb R284c Mutant From Crystals
Soaked With The Inhibitor Deoxynojirimycin
Length = 584
Score = 30.4 bits (67), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 13/55 (23%), Positives = 27/55 (49%)
Query: 226 DTSTMGYMAAKKHLEINPDHSIVETLRQXXXXXXXXXXXXXLVNLLFETSLLSSG 280
D++ G+ K L++NP+++ + R+ L+++ ET LS+G
Sbjct: 452 DSANAGFTTGKPWLKVNPNYTEINAAREIGDPKSVYSFYRNLISIRHETPALSTG 506
>pdb|1A41|A Chain A, Type 1-Topoisomerase Catalytic Fragment From Vaccinia
Virus
Length = 234
Score = 27.7 bits (60), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 12/34 (35%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 217 RIMKAQALRDTSTMGYMAAK-KHLEINPDHSIVE 249
R K + L++ T+G + K KH+EI+PD +++
Sbjct: 50 RFGKMKYLKENETVGLLTLKNKHIEISPDEIVIK 83
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.315 0.131 0.368
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,327,089
Number of Sequences: 62578
Number of extensions: 225799
Number of successful extensions: 787
Number of sequences better than 100.0: 93
Number of HSP's better than 100.0 without gapping: 89
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 675
Number of HSP's gapped (non-prelim): 105
length of query: 334
length of database: 14,973,337
effective HSP length: 99
effective length of query: 235
effective length of database: 8,778,115
effective search space: 2062857025
effective search space used: 2062857025
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 52 (24.6 bits)