Query psy4717
Match_columns 90
No_of_seqs 151 out of 1193
Neff 7.2
Searched_HMMs 29240
Date Sat Aug 17 00:02:38 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy4717.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/4717hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4bby_A Alkyldihydroxyacetoneph 99.7 1.4E-17 4.7E-22 129.8 8.5 86 3-89 176-265 (658)
2 2uuu_A Alkyldihydroxyacetoneph 99.5 5.2E-14 1.8E-18 108.7 6.8 62 27-89 135-196 (584)
3 3pm9_A Putative oxidoreductase 99.4 2.1E-13 7.3E-18 103.1 8.0 60 26-89 48-107 (476)
4 2exr_A Cytokinin dehydrogenase 99.4 3.2E-13 1.1E-17 102.9 8.1 75 4-89 42-117 (524)
5 1f0x_A DLDH, D-lactate dehydro 99.4 7.5E-13 2.6E-17 102.2 9.4 64 26-89 42-106 (571)
6 1wvf_A 4-cresol dehydrogenase 99.4 1.3E-12 4.6E-17 99.2 8.6 61 26-89 53-114 (520)
7 1e8g_A Vanillyl-alcohol oxidas 99.4 4.9E-13 1.7E-17 102.6 5.6 61 26-89 67-129 (560)
8 3fw9_A Reticuline oxidase; BI- 99.3 2.3E-12 7.7E-17 98.0 7.8 60 27-89 43-102 (495)
9 3tsh_A Pollen allergen PHL P 4 99.3 3.8E-12 1.3E-16 96.2 8.3 61 28-89 51-111 (500)
10 3pop_A GILR oxidase; FAD bindi 99.3 4.7E-12 1.6E-16 96.3 8.6 60 26-89 31-90 (501)
11 1w1o_A Cytokinin dehydrogenase 99.3 2.6E-12 8.8E-17 97.9 6.8 59 26-89 65-126 (534)
12 3rja_A Carbohydrate oxidase; p 99.3 9.2E-12 3.2E-16 94.0 9.4 61 26-89 33-93 (473)
13 3tx1_A UDP-N-acetylenolpyruvoy 99.3 7E-12 2.4E-16 91.0 6.8 63 22-89 45-109 (322)
14 2wdx_A Putative hexose oxidase 99.3 1E-11 3.5E-16 94.7 7.7 60 26-89 54-113 (523)
15 3vte_A Tetrahydrocannabinolic 99.3 9.5E-12 3.2E-16 95.1 7.3 60 27-89 51-110 (518)
16 2y3s_A TAML; oxidoreductase; H 99.3 2.1E-11 7.2E-16 93.2 8.9 59 27-89 56-114 (530)
17 1hsk_A UDP-N-acetylenolpyruvoy 99.2 6.8E-12 2.3E-16 90.9 5.6 56 29-89 48-103 (326)
18 2ipi_A Aclacinomycin oxidoredu 99.2 1.3E-11 4.5E-16 94.0 7.3 60 26-89 52-111 (521)
19 1zr6_A Glucooligosaccharide ox 99.2 1.9E-11 6.6E-16 92.7 7.5 60 27-89 40-99 (503)
20 2bvf_A 6-hydroxy-D-nicotine ox 99.2 3.1E-11 1.1E-15 90.4 7.4 59 26-89 35-93 (459)
21 1uxy_A MURB, uridine diphospho 99.2 5E-11 1.7E-15 87.1 6.3 61 22-89 5-67 (340)
22 3i99_A UDP-N-acetylenolpyruvoy 99.1 2.2E-11 7.4E-16 89.7 3.8 61 22-89 21-83 (357)
23 4feh_A Oxidoreductase DPRE1; a 99.1 3.7E-10 1.2E-14 85.6 7.7 57 28-89 41-99 (481)
24 3js8_A Cholesterol oxidase; ch 99.0 3.2E-10 1.1E-14 87.2 7.0 59 26-89 26-90 (540)
25 2i0k_A Oxidoreductase; MIX alp 99.0 6E-10 2E-14 85.6 7.3 64 26-89 32-96 (561)
26 2gqt_A UDP-N-acetylenolpyruvyl 98.9 5.6E-10 1.9E-14 79.3 4.3 57 22-89 13-71 (268)
27 2vfr_A Xylitol oxidase, aldito 98.8 1.8E-09 6.1E-14 80.0 3.8 59 23-89 14-72 (422)
28 1ffv_C CUTM, flavoprotein of c 95.5 0.015 5.2E-07 41.0 4.3 52 31-87 6-57 (287)
29 1n62_C Carbon monoxide dehydro 89.9 0.23 8E-06 34.9 3.1 51 32-87 7-57 (288)
30 2w3s_A Xanthine dehydrogenase; 86.6 0.29 9.8E-06 36.8 1.9 51 31-87 178-228 (462)
31 1yht_A DSPB; beta barrel, hydr 84.1 0.89 3.1E-05 33.0 3.4 23 37-59 92-114 (367)
32 3nvz_B Xanthine dehydrogenase/ 81.7 1.2 4.1E-05 31.5 3.3 56 26-87 6-61 (305)
33 2yl5_A Beta-N-acetylhexosamini 80.8 1.3 4.5E-05 32.9 3.3 27 38-64 93-121 (442)
34 2lnd_A De novo designed protei 79.9 2.9 9.8E-05 24.9 4.0 35 31-65 29-63 (112)
35 2yl6_A Beta-N-acetylhexosamini 79.8 1.2 4.3E-05 32.9 2.9 22 38-59 90-111 (434)
36 2g2c_A Putative molybdenum cof 79.6 4.9 0.00017 25.7 5.5 36 31-66 47-82 (167)
37 3hrd_C Nicotinate dehydrogenas 78.8 1.5 5.1E-05 30.9 2.9 51 32-87 5-56 (296)
38 1mkz_A Molybdenum cofactor bio 77.3 6.3 0.00022 25.3 5.5 36 31-66 46-82 (172)
39 2gjx_A Beta-hexosaminidase alp 77.1 2 7E-05 32.5 3.4 30 38-67 213-244 (507)
40 3rcn_A Beta-N-acetylhexosamini 76.5 2.2 7.4E-05 32.8 3.4 22 38-59 222-243 (543)
41 1now_A Beta-hexosaminidase bet 76.4 2.2 7.5E-05 32.4 3.4 28 38-65 218-247 (507)
42 2is8_A Molybdopterin biosynthe 75.9 7.7 0.00026 24.7 5.5 36 31-66 39-75 (164)
43 3gh5_A HEX1, beta-hexosaminida 75.5 2.3 7.8E-05 32.6 3.3 22 38-59 254-275 (525)
44 1jak_A Beta-N-acetylhexosamini 75.4 2.4 8.3E-05 32.2 3.4 22 38-59 229-250 (512)
45 1uuy_A CNX1, molybdopterin bio 75.2 8 0.00027 24.6 5.5 36 31-66 48-84 (167)
46 2pjk_A 178AA long hypothetical 75.1 7.6 0.00026 25.2 5.4 36 31-66 58-94 (178)
47 1t3q_C Quinoline 2-oxidoreduct 74.5 2.3 7.8E-05 29.8 2.9 51 31-87 6-56 (288)
48 2egz_A 3-dehydroquinate dehydr 74.4 3.1 0.00011 28.0 3.5 34 30-63 141-174 (219)
49 3rfq_A Pterin-4-alpha-carbinol 74.1 8.6 0.00029 25.3 5.5 36 31-66 67-102 (185)
50 3pzy_A MOG; ssgcid, seattle st 74.0 6.7 0.00023 25.1 4.9 35 31-66 45-79 (164)
51 3ozo_A N-acetylglucosaminidase 72.6 3.1 0.00011 32.2 3.4 27 38-64 254-282 (572)
52 1y5e_A Molybdenum cofactor bio 72.3 9.8 0.00034 24.3 5.4 36 31-66 49-85 (169)
53 2pbq_A Molybdenum cofactor bio 71.5 11 0.00038 24.3 5.5 36 31-66 45-81 (178)
54 1xty_A PTH, peptidyl-tRNA hydr 71.5 8 0.00027 23.7 4.6 35 29-63 54-89 (120)
55 2epl_X N-acetyl-beta-D-glucosa 71.2 3.4 0.00012 32.2 3.4 22 38-59 143-164 (627)
56 1jlj_A Gephyrin; globular alph 70.0 12 0.00041 24.5 5.5 36 31-66 55-91 (189)
57 1wn2_A Peptidyl-tRNA hydrolase 69.8 9.1 0.00031 23.5 4.6 35 29-63 55-90 (121)
58 2ox1_A 3-dehydroquinate dehydr 68.8 7.5 0.00026 25.7 4.3 33 30-63 121-153 (196)
59 1di6_A MOGA, molybdenum cofact 68.5 13 0.00043 24.6 5.4 36 31-66 43-79 (195)
60 3hl2_A O-phosphoseryl-tRNA(SEC 68.5 1.9 6.7E-05 32.9 1.5 29 36-65 229-257 (501)
61 2ozl_B PDHE1-B, pyruvate dehyd 67.3 6.5 0.00022 28.0 4.0 31 31-61 154-184 (341)
62 1rzw_A Protein AF2095(GR4); be 67.0 12 0.00042 23.1 4.8 36 29-64 48-84 (123)
63 3o1n_A 3-dehydroquinate dehydr 66.2 7.1 0.00024 27.2 4.0 34 30-63 193-231 (276)
64 4e8j_A Lincosamide resistance 65.8 3.6 0.00012 26.9 2.2 25 37-61 6-30 (161)
65 2zv3_A PTH, peptidyl-tRNA hydr 65.7 8.9 0.00031 23.3 3.9 35 29-63 49-84 (115)
66 1c7s_A Beta-N-acetylhexosamini 65.6 4.8 0.00017 32.6 3.3 23 37-59 397-419 (858)
67 1umd_B E1-beta, 2-OXO acid deh 65.5 9.3 0.00032 26.8 4.5 30 30-59 141-171 (324)
68 4gxt_A A conserved functionall 65.5 5.5 0.00019 28.9 3.4 61 3-63 175-247 (385)
69 1rlk_A Hypothetical protein TA 65.3 9.1 0.00031 23.3 3.9 35 29-63 51-86 (117)
70 2ki0_A DS119; beta-alpha-beta, 65.0 2.9 9.9E-05 20.2 1.2 28 33-60 8-35 (36)
71 1qs0_B 2-oxoisovalerate dehydr 64.7 7.9 0.00027 27.3 4.0 28 31-58 144-171 (338)
72 1w85_B Pyruvate dehydrogenase 64.6 7.8 0.00027 27.2 4.0 30 30-59 140-170 (324)
73 1q7s_A BIT1, protein CGI-147; 64.6 14 0.00046 22.5 4.6 34 30-63 52-86 (117)
74 1sfl_A 3-dehydroquinate dehydr 64.1 11 0.00037 25.6 4.5 35 30-64 159-197 (238)
75 4gqr_A Pancreatic alpha-amylas 63.3 6.3 0.00021 28.2 3.3 22 37-58 74-95 (496)
76 4as2_A Phosphorylcholine phosp 63.1 6.9 0.00024 27.8 3.5 61 3-63 106-169 (327)
77 4aie_A Glucan 1,6-alpha-glucos 62.9 10 0.00034 27.8 4.4 22 37-58 77-98 (549)
78 3okf_A 3-dehydroquinate syntha 62.1 7.8 0.00027 28.4 3.7 28 38-65 105-136 (390)
79 2kng_A Protein LSR2; DNA-bindi 60.8 2 7E-05 23.3 0.3 26 36-61 9-34 (55)
80 3ced_A Methionine import ATP-b 60.7 18 0.00063 21.0 4.6 30 31-60 66-96 (98)
81 1ik6_A Pyruvate dehydrogenase; 60.5 10 0.00035 27.4 4.0 29 31-59 190-218 (369)
82 2z1k_A (NEO)pullulanase; hydro 60.3 12 0.00042 27.2 4.5 22 37-58 94-115 (475)
83 3kbq_A Protein TA0487; structu 60.2 17 0.00057 23.7 4.7 35 31-66 41-75 (172)
84 2bfd_B 2-oxoisovalerate dehydr 60.1 10 0.00036 26.9 4.0 29 30-58 158-187 (342)
85 1wza_A Alpha-amylase A; hydrol 60.0 13 0.00043 27.3 4.5 22 37-58 79-100 (488)
86 1xah_A Sadhqs, 3-dehydroquinat 59.7 6.4 0.00022 28.0 2.8 28 38-65 72-103 (354)
87 1zcz_A Bifunctional purine bio 59.1 10 0.00035 28.8 3.8 36 28-63 426-461 (464)
88 3l9c_A 3-dehydroquinate dehydr 58.3 15 0.00053 25.3 4.5 34 30-63 176-214 (259)
89 2yr1_A 3-dehydroquinate dehydr 58.2 11 0.00039 25.8 3.8 34 30-63 173-210 (257)
90 3lab_A Putative KDPG (2-keto-3 57.7 6.4 0.00022 26.8 2.4 28 28-58 84-117 (217)
91 3clh_A 3-dehydroquinate syntha 57.7 7.6 0.00026 27.6 2.9 28 38-65 67-98 (343)
92 1rm6_B 4-hydroxybenzoyl-COA re 57.0 6.1 0.00021 28.2 2.3 49 32-87 8-56 (324)
93 3epo_A Thiamine biosynthesis p 55.8 15 0.00051 28.7 4.3 55 5-64 354-418 (612)
94 3iwt_A 178AA long hypothetical 55.5 32 0.0011 21.7 5.4 37 30-66 57-94 (178)
95 4h3d_A 3-dehydroquinate dehydr 55.3 15 0.00051 25.2 4.0 34 30-63 173-211 (258)
96 3l49_A ABC sugar (ribose) tran 55.0 25 0.00086 22.9 5.0 34 30-63 62-96 (291)
97 3bmv_A Cyclomaltodextrin gluca 54.7 15 0.00052 28.3 4.3 22 37-58 114-135 (683)
98 2j0p_A HEMS, hemin transport p 54.2 4.9 0.00017 29.2 1.4 61 1-65 192-252 (345)
99 1ht6_A AMY1, alpha-amylase iso 54.0 13 0.00043 26.7 3.6 22 37-58 66-87 (405)
100 1d3c_A Cyclodextrin glycosyltr 53.3 17 0.00057 28.1 4.3 22 37-58 113-134 (686)
101 1cyg_A Cyclodextrin glucanotra 53.0 17 0.00058 28.1 4.3 22 37-58 109-130 (680)
102 1qho_A Alpha-amylase; glycosid 53.0 17 0.00057 28.1 4.3 22 37-58 105-126 (686)
103 2lbw_A H/ACA ribonucleoprotein 52.7 10 0.00035 23.1 2.5 32 30-61 37-71 (121)
104 3bh4_A Alpha-amylase; calcium, 52.7 13 0.00046 27.1 3.6 22 37-58 76-97 (483)
105 3bfj_A 1,3-propanediol oxidore 52.6 9.4 0.00032 27.4 2.7 29 37-65 76-105 (387)
106 3dhx_A Methionine import ATP-b 52.4 30 0.001 20.3 4.6 31 30-60 66-96 (106)
107 1ud2_A Amylase, alpha-amylase; 52.4 14 0.00046 27.1 3.6 22 37-58 78-99 (480)
108 2guy_A Alpha-amylase A; (beta- 52.3 14 0.00047 27.0 3.6 22 37-58 95-116 (478)
109 2pr7_A Haloacid dehalogenase/e 52.0 19 0.00065 20.5 3.7 26 40-65 21-46 (137)
110 3rfa_A Ribosomal RNA large sub 51.9 22 0.00075 26.2 4.6 64 3-66 288-352 (404)
111 1lwj_A 4-alpha-glucanotransfer 51.8 14 0.00049 26.6 3.6 22 37-58 67-88 (441)
112 1uok_A Oligo-1,6-glucosidase; 51.7 21 0.00072 26.7 4.6 22 37-58 76-97 (558)
113 1wpc_A Glucan 1,4-alpha-maltoh 51.7 14 0.00048 27.0 3.6 22 37-58 80-101 (485)
114 1mxg_A Alpha amylase; hyperthe 51.7 14 0.00049 26.8 3.6 22 37-58 84-105 (435)
115 1g94_A Alpha-amylase; beta-alp 51.7 13 0.00044 27.0 3.3 22 37-58 62-83 (448)
116 1vlj_A NADH-dependent butanol 51.1 10 0.00035 27.5 2.7 28 38-65 86-114 (407)
117 8abp_A L-arabinose-binding pro 51.0 16 0.00056 24.1 3.6 33 30-62 58-91 (306)
118 3dhu_A Alpha-amylase; structur 50.4 15 0.00053 26.5 3.6 22 37-58 81-102 (449)
119 2ze0_A Alpha-glucosidase; TIM 50.2 23 0.00078 26.5 4.6 22 37-58 76-97 (555)
120 1hvx_A Alpha-amylase; hydrolas 50.2 15 0.00052 27.2 3.6 22 37-58 79-100 (515)
121 3edf_A FSPCMD, cyclomaltodextr 49.6 23 0.00078 26.9 4.5 22 37-58 196-217 (601)
122 2o7s_A DHQ-SDH PR, bifunctiona 48.8 14 0.00047 27.7 3.1 34 30-63 151-184 (523)
123 4e38_A Keto-hydroxyglutarate-a 48.7 13 0.00045 25.3 2.8 28 28-58 105-132 (232)
124 3zzm_A Bifunctional purine bio 48.6 19 0.00065 27.7 3.9 35 29-63 486-520 (523)
125 3lws_A Aromatic amino acid bet 48.5 17 0.00059 24.6 3.4 22 38-59 154-175 (357)
126 2aaa_A Alpha-amylase; glycosid 48.4 16 0.00056 26.7 3.5 22 37-58 95-116 (484)
127 3d02_A Putative LACI-type tran 48.3 30 0.001 22.7 4.6 34 29-62 61-95 (303)
128 1rrm_A Lactaldehyde reductase; 47.9 9.1 0.00031 27.4 2.0 29 37-65 72-101 (386)
129 3qz6_A HPCH/HPAI aldolase; str 47.8 57 0.002 22.2 6.0 22 29-50 88-111 (261)
130 4ehi_A Bifunctional purine bio 47.7 20 0.00068 27.7 3.9 35 29-63 497-531 (534)
131 3l6u_A ABC-type sugar transpor 47.4 15 0.00051 24.1 2.9 34 30-63 65-99 (293)
132 2o1x_A 1-deoxy-D-xylulose-5-ph 47.3 20 0.0007 27.5 4.0 35 31-65 449-483 (629)
133 1gcy_A Glucan 1,4-alpha-maltot 47.1 18 0.00062 26.9 3.6 22 37-58 90-111 (527)
134 1g8m_A Aicar transformylase-IM 47.1 17 0.0006 28.3 3.5 36 28-63 555-590 (593)
135 1ujn_A Dehydroquinate synthase 46.9 10 0.00035 27.0 2.1 29 37-65 65-97 (348)
136 1v72_A Aldolase; PLP-dependent 46.9 19 0.00065 24.1 3.4 22 39-60 159-180 (356)
137 3can_A Pyruvate-formate lyase- 46.8 32 0.0011 21.4 4.3 24 35-58 155-180 (182)
138 3fdb_A Beta C-S lyase, putativ 46.3 19 0.00066 24.4 3.4 22 38-59 168-189 (377)
139 2lju_A Putative oxidoreductase 46.2 18 0.0006 22.1 2.8 18 43-60 70-87 (108)
140 1oj7_A Hypothetical oxidoreduc 45.8 10 0.00035 27.5 2.0 29 37-65 90-119 (408)
141 2hq2_A Putative heme/hemoglobi 45.7 8 0.00027 28.3 1.4 40 26-65 222-261 (354)
142 2ocz_A 3-dehydroquinate dehydr 45.7 25 0.00085 23.7 3.8 34 30-63 145-183 (231)
143 4adb_A Succinylornithine trans 44.9 22 0.00074 24.5 3.5 22 38-59 202-223 (406)
144 2dh2_A 4F2 cell-surface antige 44.8 21 0.00073 25.8 3.6 22 37-58 79-100 (424)
145 2cho_A Glucosaminidase, hexosa 44.7 14 0.00047 29.3 2.7 31 35-65 180-212 (716)
146 1tv8_A MOAA, molybdenum cofact 44.6 34 0.0012 23.6 4.6 37 28-64 162-204 (340)
147 2bhu_A Maltooligosyltrehalose 44.6 29 0.00099 26.5 4.4 22 37-58 190-211 (602)
148 3bc8_A O-phosphoseryl-tRNA(SEC 44.5 5.5 0.00019 29.8 0.4 24 36-59 211-234 (450)
149 4fe3_A Cytosolic 5'-nucleotida 44.5 7.6 0.00026 26.4 1.1 24 41-64 145-168 (297)
150 3ff4_A Uncharacterized protein 44.3 23 0.0008 21.5 3.2 34 30-63 59-92 (122)
151 3v7e_A Ribosome-associated pro 44.1 20 0.00067 20.2 2.7 33 29-61 27-61 (82)
152 1ua7_A Alpha-amylase; beta-alp 43.8 16 0.00055 26.3 2.8 22 37-58 72-93 (422)
153 3ijp_A DHPR, dihydrodipicolina 43.6 31 0.0011 24.2 4.2 34 29-62 88-121 (288)
154 2wc7_A Alpha amylase, catalyti 43.6 16 0.00056 26.7 2.8 22 37-58 100-121 (488)
155 3dzz_A Putative pyridoxal 5'-p 43.6 23 0.00077 24.2 3.4 21 39-59 179-199 (391)
156 4dq6_A Putative pyridoxal phos 43.4 23 0.00078 24.2 3.4 20 40-59 184-203 (391)
157 2o1s_A 1-deoxy-D-xylulose-5-ph 43.2 26 0.0009 26.8 4.0 35 31-65 446-481 (621)
158 1m53_A Isomaltulose synthase; 43.2 22 0.00077 26.7 3.6 22 37-58 90-111 (570)
159 1jae_A Alpha-amylase; glycosid 43.0 18 0.0006 26.5 2.9 22 37-58 72-93 (471)
160 3l84_A Transketolase; TKT, str 42.8 27 0.00091 27.1 4.0 31 31-61 468-498 (632)
161 1j0h_A Neopullulanase; beta-al 42.5 23 0.00079 26.7 3.6 22 37-58 220-241 (588)
162 3m9w_A D-xylose-binding peripl 42.4 15 0.0005 24.6 2.3 34 30-63 59-93 (313)
163 1sg6_A Pentafunctional AROM po 42.3 17 0.00057 26.3 2.7 28 38-65 85-118 (393)
164 1o2d_A Alcohol dehydrogenase, 42.1 14 0.00049 26.4 2.3 28 38-65 83-111 (371)
165 3td9_A Branched chain amino ac 41.9 35 0.0012 23.1 4.2 33 29-61 204-236 (366)
166 2x7x_A Sensor protein; transfe 41.9 40 0.0014 22.6 4.5 34 29-62 62-96 (325)
167 3g7q_A Valine-pyruvate aminotr 41.7 25 0.00085 24.3 3.5 20 39-58 199-218 (417)
168 3pj0_A LMO0305 protein; struct 41.6 19 0.00064 24.4 2.7 23 38-60 156-178 (359)
169 7a3h_A Endoglucanase; hydrolas 41.5 16 0.00054 25.0 2.4 54 3-58 45-98 (303)
170 4f3y_A DHPR, dihydrodipicolina 41.4 36 0.0012 23.5 4.2 34 29-62 73-106 (272)
171 1wzl_A Alpha-amylase II; pullu 41.3 24 0.00081 26.7 3.5 22 37-58 217-238 (585)
172 1zja_A Trehalulose synthase; s 41.0 25 0.00087 26.3 3.6 22 37-58 77-98 (557)
173 4aef_A Neopullulanase (alpha-a 41.0 25 0.00085 26.9 3.6 22 37-58 283-304 (645)
174 3hl0_A Maleylacetate reductase 40.8 18 0.00063 25.7 2.7 28 38-65 72-100 (353)
175 2zic_A Dextran glucosidase; TI 40.7 25 0.00085 26.3 3.5 22 37-58 76-97 (543)
176 3p6l_A Sugar phosphate isomera 40.7 59 0.002 21.1 5.1 26 33-58 108-133 (262)
177 3uug_A Multiple sugar-binding 40.6 20 0.0007 23.9 2.8 34 30-63 60-94 (330)
178 3gon_A Phosphomevalonate kinas 40.4 61 0.0021 21.8 5.3 54 3-56 270-323 (335)
179 3iv7_A Alcohol dehydrogenase I 40.4 19 0.00064 25.9 2.7 28 38-65 73-101 (364)
180 3g0t_A Putative aminotransfera 40.3 27 0.00091 24.4 3.4 21 38-58 200-220 (437)
181 3ftb_A Histidinol-phosphate am 40.2 20 0.00069 24.2 2.7 22 38-59 162-183 (361)
182 3ezs_A Aminotransferase ASPB; 40.1 20 0.00069 24.4 2.7 22 38-59 172-193 (376)
183 3lkb_A Probable branched-chain 40.0 40 0.0014 23.1 4.3 33 29-61 198-230 (392)
184 1jq5_A Glycerol dehydrogenase; 40.0 19 0.00067 25.5 2.7 27 38-64 71-98 (370)
185 2ohw_A YUEI protein; structura 39.9 67 0.0023 20.0 5.3 25 39-63 75-99 (133)
186 3i45_A Twin-arginine transloca 39.9 42 0.0014 23.0 4.4 36 29-64 73-108 (387)
187 3h14_A Aminotransferase, class 39.8 28 0.00095 23.9 3.4 22 38-59 179-200 (391)
188 3h75_A Periplasmic sugar-bindi 39.8 24 0.00084 24.0 3.1 36 29-64 62-97 (350)
189 3m05_A Uncharacterized protein 39.3 12 0.00039 23.0 1.2 32 30-61 9-40 (114)
190 1o66_A 3-methyl-2-oxobutanoate 39.2 38 0.0013 23.8 4.0 37 28-66 173-209 (275)
191 7aat_A Aspartate aminotransfer 39.2 29 0.00098 23.9 3.4 22 38-59 193-214 (401)
192 3op7_A Aminotransferase class 39.2 28 0.00095 23.7 3.3 22 38-59 172-193 (375)
193 4hqo_A Sporozoite surface prot 39.1 47 0.0016 22.2 4.4 30 36-65 137-166 (266)
194 3ipc_A ABC transporter, substr 38.9 55 0.0019 21.9 4.8 35 29-63 69-103 (356)
195 3if2_A Aminotransferase; YP_26 38.9 29 0.00099 24.4 3.5 21 38-58 224-244 (444)
196 2rjo_A Twin-arginine transloca 38.7 36 0.0012 22.9 3.8 33 30-62 64-97 (332)
197 1ea9_C Cyclomaltodextrinase; h 38.6 24 0.00083 26.6 3.2 22 37-58 216-237 (583)
198 1gd9_A Aspartate aminotransfer 38.6 30 0.001 23.7 3.4 20 39-58 179-198 (389)
199 3ox4_A Alcohol dehydrogenase 2 38.5 15 0.00053 26.4 2.0 29 37-65 72-101 (383)
200 3bc9_A AMYB, alpha amylase, ca 38.5 26 0.00089 26.8 3.3 22 37-58 206-227 (599)
201 3uk1_A Transketolase; structur 38.4 33 0.0011 27.1 4.0 31 31-61 534-564 (711)
202 2oqx_A Tryptophanase; lyase, p 38.4 32 0.0011 24.3 3.7 22 38-59 202-223 (467)
203 3hut_A Putative branched-chain 38.4 34 0.0012 23.0 3.7 33 29-61 194-226 (358)
204 3nio_A Guanidinobutyrase; PA14 38.2 33 0.0011 24.1 3.7 31 39-69 105-135 (319)
205 4dz4_A Agmatinase; hydrolase; 38.1 23 0.00077 25.1 2.8 32 38-69 114-145 (324)
206 3hut_A Putative branched-chain 38.1 43 0.0015 22.5 4.2 36 28-63 71-106 (358)
207 2yv1_A Succinyl-COA ligase [AD 38.1 58 0.002 22.5 4.9 26 30-55 71-96 (294)
208 2dou_A Probable N-succinyldiam 38.0 31 0.0011 23.5 3.4 21 38-58 176-196 (376)
209 2qsw_A Methionine import ATP-b 38.0 57 0.002 18.7 4.2 30 30-59 68-97 (100)
210 4aee_A Alpha amylase, catalyti 37.8 30 0.001 26.8 3.6 22 37-58 309-330 (696)
211 3g1w_A Sugar ABC transporter; 37.7 20 0.0007 23.6 2.4 35 29-63 61-96 (305)
212 3fvv_A Uncharacterized protein 37.6 38 0.0013 21.2 3.6 26 39-64 94-119 (232)
213 3sg0_A Extracellular ligand-bi 37.5 52 0.0018 22.2 4.5 36 29-64 89-124 (386)
214 2hjv_A ATP-dependent RNA helic 37.5 68 0.0023 19.4 5.4 34 30-63 36-69 (163)
215 1iv8_A Maltooligosyl trehalose 37.5 29 0.00098 27.6 3.5 22 37-58 63-84 (720)
216 3aj7_A Oligo-1,6-glucosidase; 37.4 31 0.0011 26.1 3.6 22 37-58 85-106 (589)
217 2ez2_A Beta-tyrosinase, tyrosi 37.4 31 0.0011 24.3 3.5 22 38-59 193-214 (456)
218 4eyg_A Twin-arginine transloca 37.3 46 0.0016 22.4 4.2 36 29-64 72-107 (368)
219 3fsl_A Aromatic-amino-acid ami 37.2 32 0.0011 23.5 3.4 21 38-58 191-211 (397)
220 3j21_Z 50S ribosomal protein L 37.2 51 0.0018 18.9 3.9 35 30-64 32-69 (99)
221 2gax_A Hypothetical protein AT 37.2 37 0.0013 21.1 3.4 31 29-60 56-86 (135)
222 2aif_A Ribosomal protein L7A; 37.1 26 0.00088 21.7 2.6 32 30-61 58-92 (135)
223 3kax_A Aminotransferase, class 37.1 24 0.00082 24.0 2.7 22 38-59 174-195 (383)
224 3jyw_G 60S ribosomal protein L 37.1 11 0.00039 22.9 0.9 35 30-64 42-79 (113)
225 2xzm_U Ribosomal protein L7AE 37.0 42 0.0014 20.5 3.6 32 30-61 41-75 (126)
226 2qrr_A Methionine import ATP-b 36.9 60 0.0021 18.6 4.6 31 30-60 68-98 (101)
227 1ax4_A Tryptophanase; tryptoph 36.9 24 0.00081 25.0 2.7 23 38-60 202-224 (467)
228 3ghf_A Septum site-determining 36.8 11 0.00038 23.0 0.9 26 38-63 59-84 (120)
229 2x5n_A SPRPN10, 26S proteasome 36.8 30 0.001 22.3 3.1 29 37-65 119-147 (192)
230 3jtx_A Aminotransferase; NP_28 36.8 25 0.00084 24.1 2.8 21 38-58 186-206 (396)
231 4eu1_A Mitochondrial aspartate 36.7 33 0.0011 23.8 3.4 21 38-58 201-221 (409)
232 1c7n_A Cystalysin; transferase 36.7 32 0.0011 23.6 3.4 21 38-58 182-202 (399)
233 3lhl_A Putative agmatinase; pr 36.6 34 0.0012 23.6 3.5 31 39-69 74-104 (287)
234 3bzy_B ESCU; auto cleavage pro 36.5 26 0.00088 20.2 2.4 27 30-57 18-44 (83)
235 3gi1_A LBP, laminin-binding pr 36.4 38 0.0013 23.3 3.7 29 36-64 211-239 (286)
236 3gbv_A Putative LACI-family tr 36.3 19 0.00064 23.6 2.0 35 29-63 69-104 (304)
237 1jg8_A L-ALLO-threonine aldola 36.2 26 0.00087 23.6 2.7 22 39-60 152-173 (347)
238 3aml_A OS06G0726400 protein; s 36.2 48 0.0017 26.2 4.6 22 37-58 248-269 (755)
239 3f2b_A DNA-directed DNA polyme 36.2 15 0.00052 30.5 1.8 22 42-63 462-483 (1041)
240 3i09_A Periplasmic branched-ch 36.0 51 0.0018 22.4 4.3 36 29-64 71-106 (375)
241 2jya_A AGR_C_3324P, uncharacte 36.0 19 0.00063 21.9 1.8 18 43-60 62-79 (106)
242 3e2y_A Kynurenine-oxoglutarate 36.0 25 0.00087 24.2 2.7 20 39-58 186-205 (410)
243 3lop_A Substrate binding perip 35.9 54 0.0019 22.2 4.4 33 29-61 196-228 (364)
244 1usg_A Leucine-specific bindin 35.6 45 0.0015 22.2 3.9 35 29-63 69-103 (346)
245 3td9_A Branched chain amino ac 35.6 70 0.0024 21.5 4.9 35 29-63 81-115 (366)
246 1oi7_A Succinyl-COA synthetase 35.5 68 0.0023 22.1 4.9 27 29-55 64-90 (288)
247 2ioy_A Periplasmic sugar-bindi 35.5 23 0.0008 23.2 2.4 33 29-61 57-90 (283)
248 2h4a_A YRAM (HI1655); perplasm 35.4 43 0.0015 23.3 3.9 36 28-63 174-209 (325)
249 3imk_A Putative molybdenum car 35.2 85 0.0029 20.3 4.9 32 30-61 102-136 (158)
250 3kom_A Transketolase; rossmann 35.2 42 0.0014 26.2 4.1 32 31-62 489-521 (663)
251 1gpu_A Transketolase; transfer 35.1 43 0.0015 26.1 4.1 32 31-62 496-528 (680)
252 3eaq_A Heat resistant RNA depe 35.1 67 0.0023 20.6 4.6 34 30-63 32-65 (212)
253 1v2d_A Glutamine aminotransfer 35.0 37 0.0013 23.2 3.4 20 39-58 171-190 (381)
254 2gru_A 2-deoxy-scyllo-inosose 35.0 23 0.00077 25.3 2.4 28 38-65 76-107 (368)
255 2gb3_A Aspartate aminotransfer 35.0 36 0.0012 23.6 3.4 20 39-58 193-212 (409)
256 3n0w_A ABC branched chain amin 34.9 61 0.0021 22.1 4.5 36 29-64 73-108 (379)
257 3m49_A Transketolase; alpha-be 34.9 42 0.0014 26.4 4.0 31 31-61 513-544 (690)
258 3max_A HD2, histone deacetylas 34.8 45 0.0015 24.3 4.0 27 38-64 271-298 (367)
259 1b5p_A Protein (aspartate amin 34.8 37 0.0013 23.4 3.4 20 39-58 183-202 (385)
260 2e6k_A Transketolase; structur 34.8 42 0.0015 25.9 4.0 33 31-63 483-516 (651)
261 3jzd_A Iron-containing alcohol 34.7 19 0.00066 25.7 2.0 28 38-65 74-102 (358)
262 1vp4_A Aminotransferase, putat 34.7 37 0.0013 23.8 3.4 21 38-58 206-226 (425)
263 1yaa_A Aspartate aminotransfer 34.7 37 0.0013 23.5 3.4 21 38-58 194-214 (412)
264 3ei9_A LL-diaminopimelate amin 34.7 27 0.00093 24.5 2.7 21 38-58 216-236 (432)
265 3czg_A Sucrose hydrolase; (alp 34.6 36 0.0012 26.2 3.6 22 37-58 153-174 (644)
266 3niq_A 3-guanidinopropionase; 34.6 38 0.0013 23.9 3.5 31 39-69 102-132 (326)
267 2ord_A Acoat, acetylornithine 34.5 28 0.00094 24.0 2.7 20 39-58 203-222 (397)
268 3eaf_A ABC transporter, substr 34.4 45 0.0015 22.9 3.8 34 28-61 198-231 (391)
269 1u08_A Hypothetical aminotrans 34.4 32 0.0011 23.6 3.0 21 38-58 181-201 (386)
270 2r8o_A Transketolase 1, TK 1; 34.2 44 0.0015 25.9 4.0 32 31-62 488-520 (669)
271 1g5a_A Amylosucrase; glycosylt 34.2 37 0.0013 26.0 3.6 22 37-58 160-181 (628)
272 3piu_A 1-aminocyclopropane-1-c 34.1 28 0.00095 24.5 2.7 21 38-58 209-229 (435)
273 1m7x_A 1,4-alpha-glucan branch 34.0 37 0.0013 25.9 3.5 23 37-59 202-224 (617)
274 2prs_A High-affinity zinc upta 34.0 56 0.0019 22.2 4.2 29 36-64 206-234 (284)
275 2ale_A SNU13, NHP2/L7AE family 33.9 15 0.0005 23.0 1.1 32 30-61 49-83 (134)
276 3dyd_A Tyrosine aminotransfera 33.9 39 0.0013 23.8 3.5 21 38-58 209-229 (427)
277 3dfe_A Putative PII-like signa 33.8 58 0.002 19.5 3.8 30 30-59 9-38 (111)
278 3l8a_A METC, putative aminotra 33.8 29 0.00098 24.3 2.7 21 38-58 212-232 (421)
279 2rb4_A ATP-dependent RNA helic 33.8 82 0.0028 19.2 5.2 34 30-63 35-68 (175)
280 3fvs_A Kynurenine--oxoglutarat 33.7 29 0.00099 24.1 2.7 21 38-58 192-212 (422)
281 2fvy_A D-galactose-binding per 33.6 36 0.0012 22.3 3.1 34 29-62 59-93 (309)
282 2o0r_A RV0858C (N-succinyldiam 33.6 39 0.0013 23.4 3.4 20 39-58 179-198 (411)
283 1svv_A Threonine aldolase; str 33.6 30 0.001 23.1 2.7 22 39-60 163-184 (359)
284 2h3h_A Sugar ABC transporter, 33.6 26 0.00089 23.4 2.4 34 29-62 57-91 (313)
285 3b46_A Aminotransferase BNA3; 33.5 39 0.0013 24.0 3.4 20 39-58 220-239 (447)
286 4evq_A Putative ABC transporte 33.5 27 0.00093 23.7 2.5 34 29-62 206-239 (375)
287 3v7q_A Probable ribosomal prot 33.5 64 0.0022 18.7 3.9 33 29-61 35-69 (101)
288 2d59_A Hypothetical protein PH 33.4 81 0.0028 19.1 4.6 33 30-62 78-110 (144)
289 3sho_A Transcriptional regulat 33.4 45 0.0015 20.6 3.4 28 35-62 96-123 (187)
290 2v5d_A O-GLCNACASE NAGJ; famil 33.4 39 0.0013 26.7 3.6 23 36-58 203-225 (737)
291 2r2n_A Kynurenine/alpha-aminoa 33.4 40 0.0014 23.7 3.4 21 38-58 209-229 (425)
292 3nra_A Aspartate aminotransfer 33.3 30 0.001 23.8 2.7 21 38-58 197-217 (407)
293 2yv2_A Succinyl-COA synthetase 33.2 46 0.0016 23.1 3.7 25 31-55 73-97 (297)
294 1g8l_A Molybdopterin biosynthe 33.2 68 0.0023 23.5 4.7 35 31-66 222-256 (411)
295 1itz_A Transketolase; calvin c 33.0 49 0.0017 25.7 4.1 31 31-61 501-532 (675)
296 1fuk_A Eukaryotic initiation f 32.9 83 0.0028 19.0 5.2 34 30-63 31-64 (165)
297 3jx9_A Putative phosphoheptose 32.9 46 0.0016 21.5 3.4 29 38-66 23-51 (170)
298 3lmz_A Putative sugar isomeras 32.7 1E+02 0.0034 19.9 5.4 20 39-58 112-131 (257)
299 1pq4_A Periplasmic binding pro 32.7 55 0.0019 22.5 4.0 30 35-64 219-248 (291)
300 2dri_A D-ribose-binding protei 32.6 28 0.00096 22.7 2.4 34 29-62 57-91 (271)
301 3rot_A ABC sugar transporter, 32.6 18 0.00063 23.9 1.5 35 29-63 61-96 (297)
302 3mos_A Transketolase, TK; thia 32.6 48 0.0017 25.5 4.0 29 32-60 442-470 (616)
303 4evq_A Putative ABC transporte 32.6 62 0.0021 21.8 4.2 36 29-64 82-117 (375)
304 3asa_A LL-diaminopimelate amin 32.6 42 0.0014 23.2 3.4 21 38-58 181-201 (400)
305 3qgu_A LL-diaminopimelate amin 32.5 31 0.001 24.3 2.7 21 38-58 227-247 (449)
306 3ipc_A ABC transporter, substr 32.5 46 0.0016 22.3 3.6 33 29-61 193-225 (356)
307 3m07_A Putative alpha amylase; 32.5 41 0.0014 25.8 3.6 22 37-58 200-221 (618)
308 1yiz_A Kynurenine aminotransfe 32.4 31 0.0011 24.1 2.7 21 38-58 200-220 (429)
309 3ksm_A ABC-type sugar transpor 32.4 29 0.00098 22.4 2.4 34 30-63 60-94 (276)
310 2o1b_A Aminotransferase, class 32.4 34 0.0012 23.8 3.0 21 38-58 199-219 (404)
311 1tjy_A Sugar transport protein 32.4 23 0.0008 23.8 2.0 34 29-62 60-94 (316)
312 3pzl_A Agmatine ureohydrolase; 32.4 44 0.0015 23.5 3.5 34 36-69 93-130 (313)
313 2eh6_A Acoat, acetylornithine 32.3 32 0.0011 23.3 2.7 22 37-58 190-211 (375)
314 3ucq_A Amylosucrase; thermosta 32.3 41 0.0014 25.9 3.6 22 37-58 158-179 (655)
315 1usg_A Leucine-specific bindin 32.2 65 0.0022 21.3 4.3 33 29-61 193-225 (346)
316 3p04_A Uncharacterized BCR; SE 32.2 44 0.0015 19.4 2.9 21 32-52 8-28 (87)
317 3ib6_A Uncharacterized protein 32.1 35 0.0012 21.2 2.7 25 40-64 37-61 (189)
318 1p9l_A Dihydrodipicolinate red 32.0 47 0.0016 22.5 3.5 34 29-62 45-78 (245)
319 2jgn_A DBX, DDX3, ATP-dependen 32.0 92 0.0031 19.5 4.8 36 29-64 46-81 (185)
320 3vgf_A Malto-oligosyltrehalose 32.0 32 0.0011 25.9 2.8 22 37-58 165-186 (558)
321 3cf4_G Acetyl-COA decarboxylas 31.9 17 0.00057 23.0 1.1 23 40-62 49-71 (170)
322 1yd7_A 2-keto acid:ferredoxin 31.8 46 0.0016 24.0 3.6 33 30-62 151-187 (395)
323 1iay_A ACC synthase 2, 1-amino 31.8 42 0.0014 23.4 3.3 21 38-58 206-226 (428)
324 1sff_A 4-aminobutyrate aminotr 31.7 33 0.0011 23.8 2.7 21 38-58 218-238 (426)
325 1pq3_A Arginase II, mitochondr 31.7 46 0.0016 23.0 3.5 30 40-69 74-103 (306)
326 1j32_A Aspartate aminotransfer 31.6 33 0.0011 23.4 2.7 21 39-59 182-202 (388)
327 2pju_A Propionate catabolism o 31.5 58 0.002 21.8 3.9 28 32-59 133-160 (225)
328 3k8k_A Alpha-amylase, SUSG; al 31.3 44 0.0015 26.0 3.6 22 37-58 104-125 (669)
329 2pb2_A Acetylornithine/succiny 31.2 52 0.0018 23.1 3.8 21 38-58 220-240 (420)
330 2b0c_A Putative phosphatase; a 31.2 60 0.0021 19.6 3.7 26 40-65 94-119 (206)
331 2xgg_A Microneme protein 2; A/ 31.1 37 0.0013 20.9 2.7 28 39-66 137-164 (178)
332 1jeo_A MJ1247, hypothetical pr 31.1 59 0.002 20.0 3.7 26 36-61 92-117 (180)
333 3fxa_A SIS domain protein; str 31.0 47 0.0016 21.0 3.3 9 52-60 70-78 (201)
334 2aeu_A Hypothetical protein MJ 31.0 38 0.0013 23.6 3.0 23 38-60 157-179 (374)
335 4a69_A Histone deacetylase 3,; 31.0 56 0.0019 23.8 4.0 28 38-65 272-300 (376)
336 1lc5_A COBD, L-threonine-O-3-p 30.9 35 0.0012 23.2 2.7 21 38-58 164-184 (364)
337 3bzc_A TEX; helix-turn-helix, 30.9 37 0.0013 27.3 3.1 26 39-64 369-394 (785)
338 2ay1_A Aroat, aromatic amino a 30.9 35 0.0012 23.4 2.7 21 38-58 187-207 (394)
339 4f4e_A Aromatic-amino-acid ami 30.8 34 0.0012 23.9 2.7 21 38-58 213-233 (420)
340 2fn9_A Ribose ABC transporter, 30.8 32 0.0011 22.5 2.5 34 29-62 58-92 (290)
341 1r9j_A Transketolase; domains, 30.8 56 0.0019 25.4 4.1 32 31-62 488-520 (673)
342 2cev_A Protein (arginase); enz 30.8 49 0.0017 22.8 3.5 31 39-69 75-105 (299)
343 2q7w_A Aspartate aminotransfer 30.7 35 0.0012 23.3 2.7 21 38-58 190-210 (396)
344 1x92_A APC5045, phosphoheptose 30.6 50 0.0017 20.8 3.3 27 35-61 122-148 (199)
345 1m3u_A 3-methyl-2-oxobutanoate 30.6 74 0.0025 22.1 4.4 37 28-66 173-209 (264)
346 3ujp_A Mn transporter subunit; 30.5 51 0.0017 23.1 3.6 29 36-64 222-250 (307)
347 2vo9_A EAD500, L-alanyl-D-glut 30.5 20 0.0007 23.3 1.4 29 34-62 33-61 (179)
348 2q5c_A NTRC family transcripti 30.5 36 0.0012 22.1 2.7 29 31-59 120-148 (196)
349 3qbe_A 3-dehydroquinate syntha 30.4 22 0.00074 25.8 1.6 28 38-65 85-116 (368)
350 1j5p_A Aspartate dehydrogenase 30.2 56 0.0019 22.5 3.7 34 29-62 60-93 (253)
351 2hpi_A DNA polymerase III alph 30.1 13 0.00043 31.5 0.4 22 42-63 406-428 (1220)
352 1vq8_F 50S ribosomal protein L 29.9 19 0.00066 21.7 1.1 32 30-61 46-80 (120)
353 2yva_A DNAA initiator-associat 29.9 52 0.0018 20.5 3.3 28 35-62 118-145 (196)
354 2p6n_A ATP-dependent RNA helic 29.8 1.1E+02 0.0036 19.3 7.0 34 30-63 55-88 (191)
355 1d2f_A MALY protein; aminotran 29.8 32 0.0011 23.6 2.4 20 39-58 181-200 (390)
356 3l8h_A Putative haloacid dehal 29.8 31 0.0011 20.9 2.2 24 41-64 31-54 (179)
357 3gf3_A Glutaconyl-COA decarbox 29.8 31 0.001 26.8 2.4 28 33-60 388-415 (588)
358 2zyj_A Alpha-aminodipate amino 29.7 37 0.0013 23.4 2.7 21 38-58 181-201 (397)
359 3k1d_A 1,4-alpha-glucan-branch 29.7 48 0.0016 26.2 3.6 23 37-59 310-332 (722)
360 3rf7_A Iron-containing alcohol 29.6 24 0.00083 25.5 1.8 29 37-65 90-122 (375)
361 2fc3_A 50S ribosomal protein L 29.6 21 0.0007 21.7 1.2 32 30-61 45-79 (124)
362 2a0m_A Arginase superfamily pr 29.6 53 0.0018 23.0 3.5 31 39-69 98-128 (316)
363 3snr_A Extracellular ligand-bi 29.6 72 0.0024 21.2 4.1 34 29-62 69-102 (362)
364 3tcm_A Alanine aminotransferas 29.5 36 0.0012 24.8 2.7 21 38-58 255-275 (500)
365 1gq6_A Proclavaminate amidino 29.5 38 0.0013 23.6 2.7 31 39-69 97-127 (313)
366 2cy8_A D-phgat, D-phenylglycin 29.5 50 0.0017 23.4 3.4 22 37-58 219-240 (453)
367 2v5c_A O-GLCNACASE NAGJ; glyco 29.2 45 0.0015 25.8 3.3 20 38-57 205-224 (594)
368 1toa_A Tromp-1, protein (perip 29.2 71 0.0024 22.3 4.1 29 36-64 229-257 (313)
369 2x5d_A Probable aminotransfera 29.2 38 0.0013 23.5 2.7 20 39-58 191-210 (412)
370 1vef_A Acetylornithine/acetyl- 29.1 39 0.0013 23.2 2.7 21 38-58 204-224 (395)
371 4gnr_A ABC transporter substra 28.9 51 0.0017 22.2 3.3 33 29-61 196-228 (353)
372 3f4w_A Putative hexulose 6 pho 28.8 53 0.0018 20.9 3.2 31 28-58 76-108 (211)
373 1ajs_A Aspartate aminotransfer 28.8 39 0.0013 23.3 2.7 21 38-58 201-221 (412)
374 1xi9_A Putative transaminase; 28.8 40 0.0014 23.4 2.7 20 39-58 193-212 (406)
375 1o4s_A Aspartate aminotransfer 28.7 40 0.0014 23.3 2.7 20 39-58 193-212 (389)
376 3on1_A BH2414 protein; structu 28.7 60 0.0021 18.7 3.2 33 29-61 34-68 (101)
377 2xbl_A Phosphoheptose isomeras 28.6 56 0.0019 20.3 3.3 26 36-61 126-151 (198)
378 1bw0_A TAT, protein (tyrosine 28.6 40 0.0014 23.3 2.7 21 38-58 195-215 (416)
379 1xbi_A 50S ribosomal protein L 28.6 15 0.00053 22.2 0.5 32 30-61 46-80 (120)
380 2xhz_A KDSD, YRBH, arabinose 5 28.6 54 0.0019 20.2 3.2 27 36-62 106-132 (183)
381 3qas_B Undecaprenyl pyrophosph 28.5 58 0.002 22.5 3.5 20 39-58 47-66 (253)
382 3uhj_A Probable glycerol dehyd 28.5 30 0.001 25.0 2.1 27 38-64 91-118 (387)
383 3zss_A Putative glucanohydrola 28.4 52 0.0018 25.8 3.6 22 37-58 318-339 (695)
384 3cpq_A 50S ribosomal protein L 28.4 63 0.0022 19.0 3.3 32 30-61 38-72 (110)
385 3ckm_A YRAM (HI1655), LPOA; pe 28.3 74 0.0025 21.4 4.0 34 28-61 176-209 (327)
386 2aeb_A Arginase 1; hydrolase, 28.3 58 0.002 22.7 3.5 30 40-69 78-107 (322)
387 2go7_A Hydrolase, haloacid deh 28.3 45 0.0015 19.9 2.7 25 40-64 88-112 (207)
388 2vt1_B Surface presentation of 28.2 64 0.0022 18.9 3.2 25 34-58 21-45 (93)
389 2d2r_A Undecaprenyl pyrophosph 28.2 57 0.0019 22.4 3.4 20 39-58 45-64 (245)
390 1m3s_A Hypothetical protein YC 28.2 58 0.002 20.1 3.3 26 37-62 90-115 (186)
391 3trj_A Phosphoheptose isomeras 28.0 45 0.0016 21.5 2.8 26 36-61 124-149 (201)
392 1to3_A Putative aldolase YIHT; 27.9 51 0.0017 23.1 3.2 20 40-59 142-161 (304)
393 3rim_A Transketolase, TK; TPP, 27.9 62 0.0021 25.5 3.9 30 31-60 518-550 (700)
394 3hh8_A Metal ABC transporter s 27.9 49 0.0017 22.9 3.1 27 37-63 216-242 (294)
395 2zc0_A Alanine glyoxylate tran 27.8 42 0.0014 23.1 2.7 21 38-58 193-213 (407)
396 3feq_A Putative amidohydrolase 27.8 57 0.002 22.5 3.5 25 37-61 209-233 (423)
397 1rlg_A 50S ribosomal protein L 27.8 20 0.0007 21.5 1.0 32 30-61 44-78 (119)
398 3m9l_A Hydrolase, haloacid deh 27.7 45 0.0015 20.4 2.7 24 40-63 73-96 (205)
399 3ln3_A Dihydrodiol dehydrogena 27.6 45 0.0016 23.0 2.9 18 43-60 201-218 (324)
400 2p9j_A Hypothetical protein AQ 27.6 72 0.0025 18.9 3.6 24 41-64 40-63 (162)
401 3m1r_A Formimidoylglutamase; s 27.3 42 0.0014 23.6 2.7 35 35-69 96-136 (322)
402 1w41_A 50S ribosomal protein L 27.3 66 0.0022 18.5 3.2 32 30-61 33-67 (101)
403 3ihj_A Alanine aminotransferas 27.3 41 0.0014 24.6 2.7 20 39-58 254-273 (498)
404 3o3r_A Aldo-keto reductase fam 27.2 44 0.0015 23.0 2.8 18 43-60 194-211 (316)
405 2r8c_A Putative amidohydrolase 27.1 59 0.002 22.7 3.5 26 37-62 212-237 (426)
406 4hqf_A Thrombospondin-related 27.0 77 0.0026 21.1 3.9 30 36-65 140-169 (281)
407 3iz5_f 60S ribosomal protein L 26.9 1E+02 0.0036 18.3 5.3 30 30-59 43-74 (112)
408 3o85_A Ribosomal protein L7AE; 26.8 25 0.00084 21.4 1.2 32 30-61 48-82 (122)
409 3lfx_A Uncharacterized protein 26.7 42 0.0014 23.6 2.6 32 38-69 43-74 (319)
410 2wm8_A MDP-1, magnesium-depend 26.7 35 0.0012 21.1 2.0 24 40-63 71-94 (187)
411 3m0z_A Putative aldolase; MCSG 26.7 74 0.0025 22.1 3.7 25 37-61 171-195 (249)
412 2qjg_A Putative aldolase MJ040 26.6 63 0.0021 21.5 3.4 31 29-59 112-151 (273)
413 2h6r_A Triosephosphate isomera 26.6 78 0.0027 20.8 3.8 32 28-59 81-117 (219)
414 1v77_A PH1877P, hypothetical p 26.6 51 0.0017 21.5 2.9 28 39-66 146-173 (212)
415 4f40_A Prostaglandin F2-alpha 26.5 50 0.0017 22.5 2.9 18 43-60 185-202 (288)
416 1ji1_A Alpha-amylase I; beta/a 26.5 52 0.0018 25.1 3.2 22 37-58 236-261 (637)
417 3t7y_A YOP proteins translocat 26.5 32 0.0011 20.4 1.7 21 37-57 39-59 (97)
418 3pkz_A Recombinase SIN; small 26.4 66 0.0022 19.0 3.1 26 37-62 69-94 (124)
419 3glc_A Aldolase LSRF; TIM barr 26.3 57 0.0019 22.9 3.2 22 38-59 156-177 (295)
420 1pix_A Glutaconyl-COA decarbox 26.3 38 0.0013 26.2 2.4 29 32-60 385-413 (587)
421 2fts_A Gephyrin; gephyrin, neu 26.2 1E+02 0.0035 22.5 4.6 35 31-66 226-260 (419)
422 3aie_A Glucosyltransferase-SI; 26.2 53 0.0018 26.5 3.3 22 37-58 690-711 (844)
423 1vm6_A DHPR, dihydrodipicolina 26.2 51 0.0018 22.5 2.9 34 29-62 53-86 (228)
424 3aow_A Putative uncharacterize 26.2 45 0.0016 23.8 2.7 21 38-58 235-255 (448)
425 1xp2_A EAD500, PLY500, L-alany 26.1 74 0.0025 20.9 3.5 27 35-61 34-60 (179)
426 2cjg_A L-lysine-epsilon aminot 26.1 71 0.0024 22.7 3.8 24 36-59 248-271 (449)
427 1xvl_A Mn transporter, MNTC pr 26.0 83 0.0028 22.0 4.0 29 36-64 236-264 (321)
428 4gmf_A Yersiniabactin biosynth 25.9 60 0.0021 23.2 3.3 25 34-58 100-124 (372)
429 2wsk_A Glycogen debranching en 25.9 43 0.0015 25.8 2.7 21 38-58 240-260 (657)
430 3nx3_A Acoat, acetylornithine 25.9 48 0.0016 22.8 2.7 22 37-58 197-218 (395)
431 1tk9_A Phosphoheptose isomeras 25.8 46 0.0016 20.6 2.5 26 36-61 120-145 (188)
432 1oy0_A Ketopantoate hydroxymet 25.8 81 0.0028 22.1 3.9 37 28-66 191-227 (281)
433 3c01_E Surface presentation of 25.8 34 0.0012 20.3 1.7 24 34-57 21-44 (98)
434 3gnh_A L-lysine, L-arginine ca 25.8 80 0.0027 21.6 3.9 26 37-62 204-229 (403)
435 2e8y_A AMYX protein, pullulana 25.8 44 0.0015 26.0 2.7 20 39-58 315-334 (718)
436 1pea_A Amidase operon; gene re 25.7 1.2E+02 0.0042 20.6 4.8 33 29-61 75-107 (385)
437 3emz_A Xylanase, endo-1,4-beta 25.6 48 0.0016 23.5 2.7 26 40-69 61-86 (331)
438 1woh_A Agmatinase; alpha/beta 25.6 41 0.0014 23.3 2.4 30 40-69 98-127 (305)
439 3b8x_A WBDK, pyridoxamine 5-ph 25.6 29 0.00098 24.0 1.5 23 36-58 138-160 (390)
440 3c3m_A Response regulator rece 25.5 49 0.0017 18.9 2.4 27 31-57 102-128 (138)
441 3mfq_A TROA, high-affinity zin 25.4 62 0.0021 22.2 3.2 27 38-64 197-223 (282)
442 2gm5_A Transposon gamma-delta 25.1 78 0.0027 19.1 3.4 27 37-63 70-96 (139)
443 2vg0_A Short-chain Z-isoprenyl 25.1 54 0.0019 22.2 2.8 23 39-61 33-58 (227)
444 4ap9_A Phosphoserine phosphata 25.1 48 0.0016 19.8 2.4 27 39-65 81-107 (201)
445 3o0k_A Aldo/keto reductase; ss 25.1 55 0.0019 22.4 2.9 18 43-60 194-211 (283)
446 2gmw_A D,D-heptose 1,7-bisphos 25.1 41 0.0014 21.3 2.2 24 40-63 53-76 (211)
447 3tc3_A UV damage endonuclease; 25.0 52 0.0018 23.5 2.8 25 37-61 57-81 (310)
448 1zgd_A Chalcone reductase; pol 25.0 55 0.0019 22.5 2.9 19 43-61 198-216 (312)
449 1dih_A Dihydrodipicolinate red 24.9 1.5E+02 0.0051 20.2 5.1 34 29-62 72-105 (273)
450 1mi3_A Xylose reductase, XR; a 24.8 55 0.0019 22.6 2.9 18 43-60 201-218 (322)
451 3meb_A Aspartate aminotransfer 24.8 50 0.0017 23.5 2.7 21 38-58 220-240 (448)
452 3buv_A 3-OXO-5-beta-steroid 4- 24.6 56 0.0019 22.6 2.9 19 43-61 203-221 (326)
453 4exb_A Putative uncharacterize 24.6 56 0.0019 22.4 2.9 18 43-60 219-236 (292)
454 3cx3_A Lipoprotein; zinc-bindi 24.5 57 0.002 22.2 2.9 29 36-64 209-237 (284)
455 2a4x_A Mitomycin-binding prote 24.4 1.1E+02 0.0036 17.5 4.3 26 32-57 75-100 (138)
456 2l82_A Designed protein OR32; 24.4 1.3E+02 0.0045 18.6 4.6 28 32-59 5-32 (162)
457 3ro8_A Endo-1,4-beta-xylanase; 24.3 33 0.0011 24.5 1.7 27 40-70 62-88 (341)
458 3krb_A Aldose reductase; ssgci 24.3 57 0.0019 22.8 2.9 19 43-61 208-226 (334)
459 1qwk_A Aldose reductase, aldo- 24.2 57 0.002 22.5 2.9 19 43-61 185-203 (317)
460 3ncq_A Nitrogen regulatory pro 24.1 52 0.0018 19.9 2.4 33 31-63 5-38 (119)
461 1hw6_A 2,5-diketo-D-gluconic a 24.1 59 0.002 22.0 2.9 18 43-60 171-188 (278)
462 1us0_A Aldose reductase; oxido 24.1 58 0.002 22.4 2.9 19 43-61 194-212 (316)
463 3pv9_D Putative uncharacterize 24.0 50 0.0017 23.3 2.5 31 39-69 46-76 (322)
464 4e2x_A TCAB9; kijanose, tetron 24.0 86 0.003 22.0 3.8 23 41-63 307-329 (416)
465 1b93_A Protein (methylglyoxal 24.0 84 0.0029 20.0 3.4 19 39-57 99-117 (152)
466 3dmy_A Protein FDRA; predicted 23.9 1.3E+02 0.0044 22.6 4.9 33 30-62 37-69 (480)
467 1tv8_A MOAA, molybdenum cofact 23.8 90 0.0031 21.4 3.8 25 38-62 51-75 (340)
468 3snr_A Extracellular ligand-bi 23.7 1E+02 0.0036 20.4 4.1 32 29-60 190-221 (362)
469 2qs8_A XAA-Pro dipeptidase; am 23.7 75 0.0026 22.1 3.4 26 37-62 213-238 (418)
470 1vbj_A Prostaglandin F synthas 23.7 60 0.0021 22.1 2.9 18 43-60 176-193 (281)
471 3fok_A Uncharacterized protein 23.7 72 0.0025 22.8 3.3 21 38-58 161-181 (307)
472 3euc_A Histidinol-phosphate am 23.7 42 0.0014 22.7 2.1 20 39-58 176-197 (367)
473 1gjw_A Maltodextrin glycosyltr 23.6 54 0.0019 25.0 2.9 20 39-58 181-200 (637)
474 1f75_A Undecaprenyl pyrophosph 23.6 60 0.002 22.3 2.8 18 39-56 50-67 (249)
475 2x24_A Acetyl-COA carboxylase; 23.4 44 0.0015 27.0 2.3 29 32-60 462-490 (793)
476 3k7y_A Aspartate aminotransfer 23.4 51 0.0017 23.5 2.5 21 38-58 192-212 (405)
477 4fo4_A Inosine 5'-monophosphat 23.3 99 0.0034 22.3 4.1 24 40-63 198-221 (366)
478 4fb5_A Probable oxidoreductase 23.3 73 0.0025 21.8 3.3 22 37-58 129-150 (393)
479 3n0x_A Possible substrate bind 23.3 1.2E+02 0.004 20.7 4.3 34 29-62 73-106 (374)
480 3ew8_A HD8, histone deacetylas 23.3 93 0.0032 22.8 3.9 27 38-64 280-307 (388)
481 3sl1_A Arginase; metallohydrol 23.2 73 0.0025 23.6 3.4 30 40-69 172-201 (413)
482 1uz5_A MOEA protein, 402AA lon 23.2 1.1E+02 0.0037 22.3 4.3 35 31-66 225-259 (402)
483 2whl_A Beta-mannanase, baman5; 23.1 86 0.0029 21.0 3.6 23 36-58 60-82 (294)
484 3b3d_A YTBE protein, putative 23.1 45 0.0016 23.1 2.2 19 43-61 211-229 (314)
485 3f7j_A YVGN protein; aldo-keto 23.1 46 0.0016 22.6 2.2 18 43-60 173-190 (276)
486 4g3h_A Arginase (ROCF); rossma 23.1 61 0.0021 22.9 2.9 30 40-69 68-97 (330)
487 3e58_A Putative beta-phosphogl 23.1 60 0.0021 19.4 2.6 25 40-64 92-116 (214)
488 2jba_A Phosphate regulon trans 23.0 1E+02 0.0035 16.8 3.6 26 30-55 100-125 (127)
489 2ioj_A Hypothetical protein AF 23.0 22 0.00074 21.6 0.4 31 32-64 55-85 (139)
490 3i32_A Heat resistant RNA depe 23.0 1.8E+02 0.006 20.0 5.2 35 29-63 28-62 (300)
491 3ce9_A Glycerol dehydrogenase; 23.0 23 0.00078 24.9 0.6 26 38-64 74-100 (354)
492 4aff_A Nitrogen regulatory pro 22.9 54 0.0019 19.7 2.3 34 31-64 5-39 (116)
493 2wzm_A Aldo-keto reductase; ox 22.9 64 0.0022 22.0 2.9 18 43-60 179-196 (283)
494 3be7_A Zn-dependent arginine c 22.8 80 0.0027 21.7 3.4 26 37-62 203-228 (408)
495 2epj_A Glutamate-1-semialdehyd 22.8 58 0.002 22.8 2.7 22 37-58 221-242 (434)
496 1s1p_A Aldo-keto reductase fam 22.8 63 0.0022 22.4 2.9 19 43-61 200-218 (331)
497 3lop_A Substrate binding perip 22.7 73 0.0025 21.5 3.2 35 29-63 73-109 (364)
498 3ewt_E Tumor necrosis factor r 22.7 63 0.0021 14.5 1.9 13 42-54 13-25 (25)
499 3jy6_A Transcriptional regulat 22.7 90 0.0031 20.1 3.5 30 30-62 64-94 (276)
500 3ttq_A Dextransucrase; (beta/a 22.7 75 0.0026 26.7 3.6 22 37-58 910-931 (1108)
No 1
>4bby_A Alkyldihydroxyacetonephosphate synthase, peroxiso; transferase, plasmalogen, flavin, peroxisome; HET: FAD; 1.90A {Cavia porcellus} PDB: 4bc9_A* 4bca_A* 4bc7_A*
Probab=99.72 E-value=1.4e-17 Score=129.81 Aligned_cols=86 Identities=42% Similarity=0.545 Sum_probs=72.1
Q ss_pred cchhHHHHHHHHhccCccc----cceeeecCccEEEEcCCHHHHHHHHHHHHhCCCcEEEEcCCCCCCCCcccCCCCccc
Q psy4717 3 STEDVEKVVQVAHDHNLVV----NHQAIFIGTRYWCITESTEDVEKVVQVAHDHNLVIIPFGGGTNVTGAVACPENELRT 78 (90)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~----~~~~~~~~p~~vv~P~s~~~v~~vv~~a~~~~i~v~~~G~G~n~~~~~~~~~~~~~~ 78 (90)
|+|..+|+.+ +|++++.. ....|+.-|++|++|+|++||+++|++|+++++||+|+|||||+.+|..++.++..+
T Consensus 176 ~~~~~~r~~h-~~g~s~~d~~~~~~g~~~~~P~aVV~P~s~eeV~~iv~~A~~~~ipVvprGgGTsl~GG~~~~~~~~~g 254 (658)
T 4bby_A 176 SQEADDRVFR-AHGHCLHEIFLLREGMFERIPDIVLWPTCHDDVVKIVNLACKYNLCIIPIGGGTSVSYGLMCPADETRT 254 (658)
T ss_dssp ECCHHHHHHT-SCCSCHHHHHHHHSSCCSCCCSEEEECCSHHHHHHHHHHHHHTTCEEEEESSCCCSSSTTCCCTTCCSC
T ss_pred cCchHHHhhh-cCCCCHHHHHHHhCCcccCCcCEEEeeCCHHHHHHHHHHHHHCCCeEEEECCCcCCCCCCCCCCCCCCc
Confidence 6788889977 88877542 334455669999999999999999999999999999999999999988765544456
Q ss_pred eEEEEcCCCCC
Q psy4717 79 IISLDTSQMQS 89 (90)
Q Consensus 79 gvvIdl~~m~~ 89 (90)
+|+|||++||+
T Consensus 255 gVvLDlsrMnr 265 (658)
T 4bby_A 255 IISLDTSQMNR 265 (658)
T ss_dssp EEEEECTTCCC
T ss_pred EEEEECccCCC
Confidence 89999999986
No 2
>2uuu_A Alkyldihydroxyacetonephosphate synthase; transferase, lavoprotein, lipid synthesis, peroxisomal disor; HET: FAD PL3; 1.95A {Dictyostelium discoideum} PDB: 2uuv_A*
Probab=99.48 E-value=5.2e-14 Score=108.73 Aligned_cols=62 Identities=39% Similarity=0.655 Sum_probs=54.6
Q ss_pred ecCccEEEEcCCHHHHHHHHHHHHhCCCcEEEEcCCCCCCCCcccCCCCccceEEEEcCCCCC
Q psy4717 27 FIGTRYWCITESTEDVEKVVQVAHDHNLVIIPFGGGTNVTGAVACPENELRTIISLDTSQMQS 89 (90)
Q Consensus 27 ~~~p~~vv~P~s~~~v~~vv~~a~~~~i~v~~~G~G~n~~~~~~~~~~~~~~gvvIdl~~m~~ 89 (90)
...|++|++|+|++||+++|++|+++++|++|+|+|||+.+++. ++++++++|+|||++||+
T Consensus 135 ~~~p~~vv~P~s~eeV~~iv~~a~~~~~pv~~~GgGts~~gg~~-~~~~~~g~vvidl~~mn~ 196 (584)
T 2uuu_A 135 KNAPDLIVLPHSHEEVERLVQLAHKYNVVIIPMGGGSNIVGAIE-PVSNERFTVSIDMRRMNK 196 (584)
T ss_dssp CCCCSEEECCCSHHHHHHHHHHHHHHTCEEEEESSCCCSSCTTS-CCCCSSCEEEEECTTCCC
T ss_pred CCCCCEEEeCCCHHHHHHHHHHHHHcCCeEEEEeCCCCCCCCCc-ccCCCCCEEEEECCCCCc
Confidence 44699999999999999999999999999999999999998885 543344689999999985
No 3
>3pm9_A Putative oxidoreductase; putative D-2-hydroxyglutarate dehydrogenase, putative D-LACT dehydrogenase; HET: FAD; 2.57A {Rhodopseudomonas palustris}
Probab=99.44 E-value=2.1e-13 Score=103.09 Aligned_cols=60 Identities=22% Similarity=0.358 Sum_probs=54.1
Q ss_pred eecCccEEEEcCCHHHHHHHHHHHHhCCCcEEEEcCCCCCCCCcccCCCCccceEEEEcCCCCC
Q psy4717 26 IFIGTRYWCITESTEDVEKVVQVAHDHNLVIIPFGGGTNVTGAVACPENELRTIISLDTSQMQS 89 (90)
Q Consensus 26 ~~~~p~~vv~P~s~~~v~~vv~~a~~~~i~v~~~G~G~n~~~~~~~~~~~~~~gvvIdl~~m~~ 89 (90)
+...|++|++|+|++||++++++|+++++|++|+|+|||+.+++. ++. +|++|||++||+
T Consensus 48 ~~~~p~~vv~P~s~eeV~~~v~~a~~~~~pv~~~GgGt~~~g~~~-~~~---ggvvIdl~~m~~ 107 (476)
T 3pm9_A 48 YRGHSPLVLRPGSTEEVVAICKLANEARVALVPQGGNTGLVGGQT-PHN---GEVVISLKRMDK 107 (476)
T ss_dssp CBCCCSCEECCCSHHHHHHHHHHHHHHTCCEEEESSSCCSSSTTC-CCS---SCEEEECTTCCC
T ss_pred cCCCCCEEEecCCHHHHHHHHHHHHHcCCeEEEEeCCCCCCCCcc-CCC---CcEEEEeeCCCc
Confidence 455699999999999999999999999999999999999998885 444 489999999985
No 4
>2exr_A Cytokinin dehydrogenase 7; AT5G21482.1, cytokinin oxidase/dehydrogenase, CKX, structura genomics, protein structure initiative; HET: MSE FAD; 1.70A {Arabidopsis thaliana} PDB: 2q4w_A*
Probab=99.43 E-value=3.2e-13 Score=102.94 Aligned_cols=75 Identities=16% Similarity=0.189 Sum_probs=59.9
Q ss_pred chhHHHHHHHHhccCccccceeeecCccEEEEcCCHHHHHHHHHHHHh-CCCcEEEEcCCCCCCCCcccCCCCccceEEE
Q psy4717 4 TEDVEKVVQVAHDHNLVVNHQAIFIGTRYWCITESTEDVEKVVQVAHD-HNLVIIPFGGGTNVTGAVACPENELRTIISL 82 (90)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~vv~P~s~~~v~~vv~~a~~-~~i~v~~~G~G~n~~~~~~~~~~~~~~gvvI 82 (90)
+|+.++... ++|.+ ..+...|++|++|+|++||+++|++|++ +++|++|+|+|||+.++.. +. +||+|
T Consensus 42 ~d~~~~~~~-~~d~~-----~~~~~~P~~vv~P~s~eeV~~iv~~a~~~~~~~v~~~GgGts~~g~~~-~~----~gvvi 110 (524)
T 2exr_A 42 CGGAAADIA-GRDFG-----GMNCVKPLAVVRPVGPEDIAGAVKAALRSDKLTVAARGNGHSINGQAM-AE----GGLVV 110 (524)
T ss_dssp CSHHHHHHH-TCCTT-----CCCCCCCSEEEECSSHHHHHHHHHHHHHSSSCCEEEESSSCCSSSTTC-CT----TSEEE
T ss_pred eCHHHHHHH-hcccc-----ccccCCCCEEEecCCHHHHHHHHHHHHhhcCceEEEECCCcCCCCccc-CC----CEEEE
Confidence 455555533 44432 3356679999999999999999999996 9999999999999997775 33 38999
Q ss_pred EcCCCCC
Q psy4717 83 DTSQMQS 89 (90)
Q Consensus 83 dl~~m~~ 89 (90)
||++||+
T Consensus 111 dl~~m~~ 117 (524)
T 2exr_A 111 DMSTTAE 117 (524)
T ss_dssp EGGGGTT
T ss_pred ECcCCCC
Confidence 9999985
No 5
>1f0x_A DLDH, D-lactate dehydrogenase; oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: d.58.32.2 d.145.1.1
Probab=99.42 E-value=7.5e-13 Score=102.21 Aligned_cols=64 Identities=11% Similarity=0.084 Sum_probs=54.6
Q ss_pred eecCccEEEEcCCHHHHHHHHHHHHhCCCcEEEEcCCCCCCCCcccCCCCcc-ceEEEEcCCCCC
Q psy4717 26 IFIGTRYWCITESTEDVEKVVQVAHDHNLVIIPFGGGTNVTGAVACPENELR-TIISLDTSQMQS 89 (90)
Q Consensus 26 ~~~~p~~vv~P~s~~~v~~vv~~a~~~~i~v~~~G~G~n~~~~~~~~~~~~~-~gvvIdl~~m~~ 89 (90)
+...|.+|++|+|++||+++|++|+++++|++|+|+|||+.+++.+..++++ ++|+|||++||+
T Consensus 42 ~~~~p~~Vv~P~s~~eV~~iv~~a~~~~~~v~~~GgGt~~~G~~~~~~~~~~r~gvvIdl~rmn~ 106 (571)
T 1f0x_A 42 GQGDALAVVFPGSLLELWRVLKACVTADKIILMQAANTGLTEGSTPNGNDYDRDVVIISTLRLDK 106 (571)
T ss_dssp CBBCCSEEECCSSHHHHHHHHHHHHHTTCEEEEESSCCCSSSTTSCCBSCCSSCEEEEECTTCCC
T ss_pred cCCCccEEEeeCCHHHHHHHHHHHHHcCCCEEEECCCcCCCCCccCCCcCCcCceEEEECcccCC
Confidence 5567999999999999999999999999999999999999988863321221 389999999985
No 6
>1wvf_A 4-cresol dehydrogenase [hydroxylating] flavoprote subunit; flavoprotein, electron-transfer, FAD, oxidoreductase; HET: FAD; 1.30A {Pseudomonas putida} SCOP: d.58.32.1 d.145.1.1 PDB: 1wve_A* 1dii_A* 1diq_A*
Probab=99.38 E-value=1.3e-12 Score=99.17 Aligned_cols=61 Identities=21% Similarity=0.298 Sum_probs=51.9
Q ss_pred eecCccEEEEcCCHHHHHHHHHHHHhCCCcEEEEcCCCCCC-CCcccCCCCccceEEEEcCCCCC
Q psy4717 26 IFIGTRYWCITESTEDVEKVVQVAHDHNLVIIPFGGGTNVT-GAVACPENELRTIISLDTSQMQS 89 (90)
Q Consensus 26 ~~~~p~~vv~P~s~~~v~~vv~~a~~~~i~v~~~G~G~n~~-~~~~~~~~~~~~gvvIdl~~m~~ 89 (90)
+...|++|++|+|++||+++|++|+++++|++|+|+|||+. +++.+... +||+|||++||+
T Consensus 53 ~~~~p~~vv~P~s~~ev~~~v~~a~~~~~pv~~~g~G~~~~~g~~~~~~~---~gvvidl~~m~~ 114 (520)
T 1wvf_A 53 AAHAPSAAVTATTVEQVQGVVKICNEHKIPIWTISTGRNFGYGSAAPVQR---GQVILDLKKMNK 114 (520)
T ss_dssp GGGCCSEEEECCSHHHHHHHHHHHHHHTCCEEEESSCCCTTTTTTSCSST---TCEEEECTTCCC
T ss_pred cCCCCCEEEecCCHHHHHHHHHHHHHCCCcEEEEcCCCCCCCCCCCCCCC---CeEEEECCCCCc
Confidence 34569999999999999999999999999999999999997 54432122 589999999985
No 7
>1e8g_A Vanillyl-alcohol oxidase; oxidoreductase, flavoenzyme, specificity; HET: FAD FCR; 2.1A {Penicillium simplicissimum} SCOP: d.58.32.1 d.145.1.1 PDB: 1e8f_A* 1e8h_A* 1qlt_A* 1qlu_A* 1vao_A* 1ahv_A* 1ahz_A* 1ahu_A* 2vao_A* 1w1j_A* 1dzn_A* 1w1l_A* 1e0y_A* 1w1k_A* 1w1m_A*
Probab=99.37 E-value=4.9e-13 Score=102.57 Aligned_cols=61 Identities=20% Similarity=0.266 Sum_probs=52.3
Q ss_pred eecCccEEEEcCCHHHHHHHHHHHHhCCCcEEEEcCCCCCC-CCcccCCCCccceEEEEc-CCCCC
Q psy4717 26 IFIGTRYWCITESTEDVEKVVQVAHDHNLVIIPFGGGTNVT-GAVACPENELRTIISLDT-SQMQS 89 (90)
Q Consensus 26 ~~~~p~~vv~P~s~~~v~~vv~~a~~~~i~v~~~G~G~n~~-~~~~~~~~~~~~gvvIdl-~~m~~ 89 (90)
+...|++|++|+|++||+++|++|+++++|++|+|+|||+. ++..++.. +||+||| ++||+
T Consensus 67 ~~~~p~~Vv~P~s~~eV~~iv~~a~~~~~pv~~~g~Gt~~~~gg~~p~~~---~gvvidl~~~mn~ 129 (560)
T 1e8g_A 67 DYFLASAIVAPRNVADVQSIVGLANKFSFPLWPISIGRNSGYGGAAPRVS---GSVVLDMGKNMNR 129 (560)
T ss_dssp TSSCCSEEECCSSHHHHHHHHHHHHHHTCCEEEESSCCCTTTTTTCCSST---TCEEEECTTTCCC
T ss_pred cccCCcEEEeCCCHHHHHHHHHHHHHcCCcEEEecCCCcCCcCCCCCCcC---CEEEEEchHhcCC
Confidence 44569999999999999999999999999999999999997 66543122 4899999 99985
No 8
>3fw9_A Reticuline oxidase; BI-covalent flavinylation, N-glycosylation, alakloid biosynt oxidoreductase, alkaloid metabolism; HET: FAD SLX NAG MAN; 1.49A {Eschscholzia californica} PDB: 3d2h_A* 3d2d_A* 3d2j_A* 3gsy_A* 4ec3_A* 3fw8_A* 3fw7_A* 3fwa_A*
Probab=99.34 E-value=2.3e-12 Score=98.00 Aligned_cols=60 Identities=13% Similarity=0.204 Sum_probs=52.9
Q ss_pred ecCccEEEEcCCHHHHHHHHHHHHhCCCcEEEEcCCCCCCCCcccCCCCccceEEEEcCCCCC
Q psy4717 27 FIGTRYWCITESTEDVEKVVQVAHDHNLVIIPFGGGTNVTGAVACPENELRTIISLDTSQMQS 89 (90)
Q Consensus 27 ~~~p~~vv~P~s~~~v~~vv~~a~~~~i~v~~~G~G~n~~~~~~~~~~~~~~gvvIdl~~m~~ 89 (90)
...|++|++|+|++||+++|++|+++++|+.++|||||+.+.+.+.++ +|++|||++|++
T Consensus 43 ~~~P~~vv~P~s~~dV~~~v~~a~~~~~~v~vrGgGh~~~g~~~~~~~---ggvvIdl~~m~~ 102 (495)
T 3fw9_A 43 ISKPSAIILPGSKEELSNTIRCIRKGSWTIRLRSGGHSYEGLSYTSDT---PFILIDLMNLNR 102 (495)
T ss_dssp SCCCSEEECCCSHHHHHHHHHHHHTSSCEEEEESSCCCTTCTTSCCSS---CEEEEECTTCCC
T ss_pred CCCCCEEEecCCHHHHHHHHHHHHHcCCeEEEECCCcCCCCccccCCC---CeEEEECCCCCc
Confidence 356999999999999999999999999999999999999877653343 489999999985
No 9
>3tsh_A Pollen allergen PHL P 4; flavoprotein, BI-covalent flavinylation, oxidoreductase, Glu dehydrogenase, N-glycosylation, allergy, dehydrogenase; HET: FDA; 1.90A {Phleum pratense} PDB: 3tsj_A*
Probab=99.33 E-value=3.8e-12 Score=96.23 Aligned_cols=61 Identities=16% Similarity=0.247 Sum_probs=50.6
Q ss_pred cCccEEEEcCCHHHHHHHHHHHHhCCCcEEEEcCCCCCCCCcccCCCCccceEEEEcCCCCC
Q psy4717 28 IGTRYWCITESTEDVEKVVQVAHDHNLVIIPFGGGTNVTGAVACPENELRTIISLDTSQMQS 89 (90)
Q Consensus 28 ~~p~~vv~P~s~~~v~~vv~~a~~~~i~v~~~G~G~n~~~~~~~~~~~~~~gvvIdl~~m~~ 89 (90)
..|.+|++|+|++||+++|++|+++++||.++||||++.|.+. ......+|++|||++||+
T Consensus 51 ~~P~~vv~p~~~~~v~~~v~~a~~~~~~~~~r~gGh~~~g~s~-~~~~~~~~~~idl~~~~~ 111 (500)
T 3tsh_A 51 VKPLYIITPTQVSHIQSAVVCGRRHSVRIRVRSGGHDYEGLSY-RSLQPETFAVVDLNKMRA 111 (500)
T ss_dssp CCCSEEECCSSHHHHHHHHHHHHHTTCEEEEESSCCCTTCTTT-CCSSSCCEEEEECTTCCC
T ss_pred CCceEEEEcCCHHHHHHHHHHHHHCCCcEEEEcCCcCCCCCcC-CCCCcCCeEEEECcCCCC
Confidence 4599999999999999999999999999999999999875432 111112599999999985
No 10
>3pop_A GILR oxidase; FAD binding protein, gilvocarcin, gilvocarcin biosynthesis, covalently bound FAD, oxidoreductase; HET: FAD; 1.65A {Streptomyces griseoflavus} PDB: 3pqb_A*
Probab=99.32 E-value=4.7e-12 Score=96.34 Aligned_cols=60 Identities=17% Similarity=0.217 Sum_probs=52.9
Q ss_pred eecCccEEEEcCCHHHHHHHHHHHHhCCCcEEEEcCCCCCCCCcccCCCCccceEEEEcCCCCC
Q psy4717 26 IFIGTRYWCITESTEDVEKVVQVAHDHNLVIIPFGGGTNVTGAVACPENELRTIISLDTSQMQS 89 (90)
Q Consensus 26 ~~~~p~~vv~P~s~~~v~~vv~~a~~~~i~v~~~G~G~n~~~~~~~~~~~~~~gvvIdl~~m~~ 89 (90)
+...|.+|++|+|++||+++|++|+++++|+.++|||||+.+.+...+ +|++|||++|++
T Consensus 31 ~~~~P~~vv~P~s~~dV~~~v~~a~~~~~~v~vrggGh~~~g~~~~~~----~gvvIdl~~l~~ 90 (501)
T 3pop_A 31 FVVEPEEFFLPATPDDVVASLQKAVTEGRGVACRSGGHCGQDFVGTPR----RDLVLDLHNLHA 90 (501)
T ss_dssp SCCCCSEEEECSSHHHHHHHHHHHHHTTCCEEEESSCCCSSSTTTSSC----CSEEEECTTCCC
T ss_pred cCCCCCEEEEeCCHHHHHHHHHHHHHcCCeEEEEeCCccCCCccccCC----CEEEEEecccCC
Confidence 456799999999999999999999999999999999999987664233 489999999985
No 11
>1w1o_A Cytokinin dehydrogenase 1; flavin, oxidoreductase, flavoprotein, FAD; HET: NAG FAD; 1.7A {Zea mays} SCOP: d.58.32.4 d.145.1.1 PDB: 1w1q_A* 1w1r_A* 1w1s_A* 3dq0_A* 2qkn_A* 3c0p_A* 3bw7_A* 2qpm_A* 3kjm_A*
Probab=99.32 E-value=2.6e-12 Score=97.87 Aligned_cols=59 Identities=14% Similarity=0.091 Sum_probs=52.2
Q ss_pred eecCccEEEEcCCHHHHHHHHHHHHh--C-CCcEEEEcCCCCCCCCcccCCCCccceEEEEcCCCCC
Q psy4717 26 IFIGTRYWCITESTEDVEKVVQVAHD--H-NLVIIPFGGGTNVTGAVACPENELRTIISLDTSQMQS 89 (90)
Q Consensus 26 ~~~~p~~vv~P~s~~~v~~vv~~a~~--~-~i~v~~~G~G~n~~~~~~~~~~~~~~gvvIdl~~m~~ 89 (90)
+...|++|++|+|++||+++|++|++ + ++|++|+|+|||+.++.. +. +|++|||++||+
T Consensus 65 ~~~~p~~vv~P~s~~ev~~~v~~a~~~~~~~~~v~~~G~G~~~~g~~~-~~----~gvvi~l~~m~~ 126 (534)
T 1w1o_A 65 TSALPAAVLYPSSTGDLVALLSAANSTPGWPYTIAFRGRGHSLMGQAF-AP----GGVVVNMASLGD 126 (534)
T ss_dssp CCCCCSEEECCSSHHHHHHHHHHHHHCTTCCCCEEEESSCCCSSSTTC-CT----TSEEEEGGGGGC
T ss_pred ccCCCCEEEecCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCCCCcC-CC----CeEEEECccccc
Confidence 55679999999999999999999998 6 999999999999987774 33 489999998875
No 12
>3rja_A Carbohydrate oxidase; protein-substrate analogue complex, FAD binding domain, BERB berberine-like domain, glucooligosaccharide oxidase; HET: FAD NAG ABL TRS; 2.10A {Microdochium nivale} PDB: 3rj8_A*
Probab=99.31 E-value=9.2e-12 Score=93.97 Aligned_cols=61 Identities=18% Similarity=0.138 Sum_probs=51.6
Q ss_pred eecCccEEEEcCCHHHHHHHHHHHHhCCCcEEEEcCCCCCCCCcccCCCCccceEEEEcCCCCC
Q psy4717 26 IFIGTRYWCITESTEDVEKVVQVAHDHNLVIIPFGGGTNVTGAVACPENELRTIISLDTSQMQS 89 (90)
Q Consensus 26 ~~~~p~~vv~P~s~~~v~~vv~~a~~~~i~v~~~G~G~n~~~~~~~~~~~~~~gvvIdl~~m~~ 89 (90)
+...|++|++|+|++||+++|++|+++++|+.++|||||+.+.+.... +++++|||++|++
T Consensus 33 ~~~~p~~vv~P~s~~dv~~~v~~a~~~~~~v~v~ggGh~~~g~~~~~~---~~~vvIdl~~~~~ 93 (473)
T 3rja_A 33 LPYIPTAIAQTQTTAHIQSAVQCAKKLNLKVSAKSGGHSYASFGFGGE---NGHLMVQLDRMID 93 (473)
T ss_dssp SCCCCSEEEECCSHHHHHHHHHHHHHTTCCEEEESSCCCTTCGGGTSS---SSCEEEECTTCCC
T ss_pred cCCCCCEEEEeCCHHHHHHHHHHHHHcCCeEEEEcCCCCCCCCcccCC---CCeEEEECCCCCc
Confidence 345699999999999999999999999999999999999985442111 2589999999975
No 13
>3tx1_A UDP-N-acetylenolpyruvoylglucosamine reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: FAD; 2.69A {Listeria monocytogenes}
Probab=99.27 E-value=7e-12 Score=91.05 Aligned_cols=63 Identities=16% Similarity=0.312 Sum_probs=52.5
Q ss_pred cceeeecC--ccEEEEcCCHHHHHHHHHHHHhCCCcEEEEcCCCCCCCCcccCCCCccceEEEEcCCCCC
Q psy4717 22 NHQAIFIG--TRYWCITESTEDVEKVVQVAHDHNLVIIPFGGGTNVTGAVACPENELRTIISLDTSQMQS 89 (90)
Q Consensus 22 ~~~~~~~~--p~~vv~P~s~~~v~~vv~~a~~~~i~v~~~G~G~n~~~~~~~~~~~~~~gvvIdl~~m~~ 89 (90)
.|+.++++ |+++++|+|++||++++++|+++++|++++|+|||+..+ +.++ +|++|+|++|++
T Consensus 45 ~~tt~~igg~p~~vv~P~s~eev~~~v~~a~~~~~pv~v~GgGsnl~~~----~~~~-~gvvI~l~~~~~ 109 (322)
T 3tx1_A 45 KYTYTKTGGAADVFVMPKTIEEAQEVVAYCHQNKIPLTILGNGSNLIIK----DGGI-RGVILHLDLLQT 109 (322)
T ss_dssp GGSTTSCCCEEEEEEECSSHHHHHHHHHHHHHTTCCEEEESCCTTEEEC----TTCE-EEEEEECTTCCC
T ss_pred HhccCCcCceeeEEEEeCCHHHHHHHHHHHHHcCCcEEEECCccCCCcC----CCCC-CeEEEECCCCCc
Confidence 34556553 999999999999999999999999999999999999732 2233 499999998875
No 14
>2wdx_A Putative hexose oxidase; oxidoreductase-antibiotic complex, glycopeptide; HET: FAD GHP 3MY 3FG OMY BMA NAG N1L T55; 2.30A {Nonomuraea SP} PDB: 2wdw_A*
Probab=99.27 E-value=1e-11 Score=94.73 Aligned_cols=60 Identities=18% Similarity=0.201 Sum_probs=52.4
Q ss_pred eecCccEEEEcCCHHHHHHHHHHHHhCCCcEEEEcCCCCCCCCcccCCCCccceEEEEcCCCCC
Q psy4717 26 IFIGTRYWCITESTEDVEKVVQVAHDHNLVIIPFGGGTNVTGAVACPENELRTIISLDTSQMQS 89 (90)
Q Consensus 26 ~~~~p~~vv~P~s~~~v~~vv~~a~~~~i~v~~~G~G~n~~~~~~~~~~~~~~gvvIdl~~m~~ 89 (90)
+...|.+|++|++++||+++|++|+++++|+.++|||||+.+.....+ +|++|||++|++
T Consensus 54 ~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~v~ggGh~~~g~~~~~~----~gvvIdl~~m~~ 113 (523)
T 2wdx_A 54 FNGEPDYIHLVGSTQQVADAVEETVRTGKRVAVRSGGHCFEDFVDNPD----VKVIIDMSLLTE 113 (523)
T ss_dssp CCCCCSEEEECSSHHHHHHHHHHHHHHTCCEEEESSCCCSSSSSSSTT----CCEEEECTTCCC
T ss_pred ccCCCCEEEEeCCHHHHHHHHHHHHHcCCcEEEEcCCCCCCCCccCCC----CeEEEEcccCCC
Confidence 445699999999999999999999999999999999999987654222 489999999985
No 15
>3vte_A Tetrahydrocannabinolic acid synthase; BI-covalent flavinylation, oxidoreductase; HET: NAG FAD; 2.75A {Cannabis sativa}
Probab=99.26 E-value=9.5e-12 Score=95.14 Aligned_cols=60 Identities=13% Similarity=0.179 Sum_probs=51.6
Q ss_pred ecCccEEEEcCCHHHHHHHHHHHHhCCCcEEEEcCCCCCCCCcccCCCCccceEEEEcCCCCC
Q psy4717 27 FIGTRYWCITESTEDVEKVVQVAHDHNLVIIPFGGGTNVTGAVACPENELRTIISLDTSQMQS 89 (90)
Q Consensus 27 ~~~p~~vv~P~s~~~v~~vv~~a~~~~i~v~~~G~G~n~~~~~~~~~~~~~~gvvIdl~~m~~ 89 (90)
...|.+|++|+|++||+++|++|+++++|+.++|||||+.+....... +|++|||++|++
T Consensus 51 ~~~P~~vv~P~s~~dV~~~v~~a~~~~~~v~vrggGh~~~g~~~~~~~---~gvvIdl~~l~~ 110 (518)
T 3vte_A 51 TPKPLVIVTPSNNSHIQATILCSKKVGLQIRTRSGGHDAEGMSYISQV---PFVVVDLRNMHS 110 (518)
T ss_dssp SCCCSEEECCCSHHHHHHHHHHHHHHTCEEEEESSCCCTTCTTTCCSS---SEEEEECTTCCC
T ss_pred CCCCCEEEEeCCHHHHHHHHHHHHHcCCcEEEECCCcCCCCCccCCCC---CeEEEECCCCce
Confidence 356999999999999999999999999999999999999765531212 599999999985
No 16
>2y3s_A TAML; oxidoreductase; HET: FAD TIR; 1.67A {Streptomyces SP} PDB: 2y3r_A* 2y08_A* 2y4g_A*
Probab=99.26 E-value=2.1e-11 Score=93.17 Aligned_cols=59 Identities=17% Similarity=0.186 Sum_probs=51.6
Q ss_pred ecCccEEEEcCCHHHHHHHHHHHHhCCCcEEEEcCCCCCCCCcccCCCCccceEEEEcCCCCC
Q psy4717 27 FIGTRYWCITESTEDVEKVVQVAHDHNLVIIPFGGGTNVTGAVACPENELRTIISLDTSQMQS 89 (90)
Q Consensus 27 ~~~p~~vv~P~s~~~v~~vv~~a~~~~i~v~~~G~G~n~~~~~~~~~~~~~~gvvIdl~~m~~ 89 (90)
...|.+|+.|++++||+++|++|+++++|+.++|+|||+.+.+...+ +|++|||++|++
T Consensus 56 ~~~p~~vv~p~s~~dv~~~v~~a~~~~~~v~v~ggGh~~~g~~~~~~----~gvvIdl~~l~~ 114 (530)
T 2y3s_A 56 VGDPEEIHLVGSAAEIEQVLSRAVRSGKRVAVRSGGHCYEDFVANSD----VRVVMDMSRLSA 114 (530)
T ss_dssp CCCCSEEEECCSHHHHHHHHHHHHHTTCCEEEESSCCCSSSTTTCTT----CCEEEECTTCCC
T ss_pred cCCCCEEEecCCHHHHHHHHHHHHHcCCcEEEECCCCCCCCCcccCC----CeEEEEcccCCC
Confidence 45699999999999999999999999999999999999987553222 489999999985
No 17
>1hsk_A UDP-N-acetylenolpyruvoylglucosamine reductase; peptidoglycan synthesis, cell WALL, cell division, oxidoreductase, NADP, flavoprotein, FAD; HET: FAD; 2.30A {Staphylococcus aureus} SCOP: d.145.1.2 d.146.1.1
Probab=99.25 E-value=6.8e-12 Score=90.93 Aligned_cols=56 Identities=16% Similarity=0.307 Sum_probs=49.3
Q ss_pred CccEEEEcCCHHHHHHHHHHHHhCCCcEEEEcCCCCCCCCcccCCCCccceEEEEcCCCCC
Q psy4717 29 GTRYWCITESTEDVEKVVQVAHDHNLVIIPFGGGTNVTGAVACPENELRTIISLDTSQMQS 89 (90)
Q Consensus 29 ~p~~vv~P~s~~~v~~vv~~a~~~~i~v~~~G~G~n~~~~~~~~~~~~~~gvvIdl~~m~~ 89 (90)
.|++|++|+|++||++++++|+++++|++|+|+|||+.++.. +. +|++|||++|++
T Consensus 48 ~p~~vv~P~s~eev~~~l~~a~~~~~pv~~~GgGtnl~~~~~----~~-~gvvI~l~~m~~ 103 (326)
T 1hsk_A 48 NADFYITPTKNEEVQAVVKYAYQNEIPVTYLGNGSNIIIREG----GI-RGIVISLLSLDH 103 (326)
T ss_dssp EEEEEECCSSHHHHHHHHHHHHHTTCCEEEESSCSSEEECTT----CE-EEEEEECTTCCC
T ss_pred cceEEEEcCCHHHHHHHHHHHHHcCCCEEEECCCCccccCCC----CC-CeEEEEeCCCCc
Confidence 399999999999999999999999999999999999975442 12 489999999975
No 18
>2ipi_A Aclacinomycin oxidoreductase (aknox); anthracycline, flavoenzyme, twinning, MAD; HET: AKY FAD; 1.65A {Streptomyces galilaeus}
Probab=99.25 E-value=1.3e-11 Score=94.03 Aligned_cols=60 Identities=22% Similarity=0.189 Sum_probs=52.3
Q ss_pred eecCccEEEEcCCHHHHHHHHHHHHhCCCcEEEEcCCCCCCCCcccCCCCccceEEEEcCCCCC
Q psy4717 26 IFIGTRYWCITESTEDVEKVVQVAHDHNLVIIPFGGGTNVTGAVACPENELRTIISLDTSQMQS 89 (90)
Q Consensus 26 ~~~~p~~vv~P~s~~~v~~vv~~a~~~~i~v~~~G~G~n~~~~~~~~~~~~~~gvvIdl~~m~~ 89 (90)
+...|.+|++|++++||+++|++|+++++|+.++|||||+.+.+...+ +|++|||++|++
T Consensus 52 ~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~vrggGh~~~g~~~~~~----~gvvIdl~~l~~ 111 (521)
T 2ipi_A 52 FRGRPDVVYVVHTADQVVDAVNQAMAAGQRIAVRSGGHCFEGFVDDPA----VRAVIDMSQMRQ 111 (521)
T ss_dssp CCCCCSEEEECSSHHHHHHHHHHHHHHTCCEEEESSCCCTTCGGGCTT----CCEEEECTTCCC
T ss_pred ccCCCCEEEEcCCHHHHHHHHHHHHHcCCeEEEECCCcCCCCCcccCC----CeEEEecccCCC
Confidence 445699999999999999999999999999999999999987653223 489999999985
No 19
>1zr6_A Glucooligosaccharide oxidase; alpha + beta, flavoenzyme, oxidoreductase; HET: NAG FAD; 1.55A {Acremonium strictum} PDB: 2axr_A* 3e0t_A* 3hsu_A*
Probab=99.23 E-value=1.9e-11 Score=92.71 Aligned_cols=60 Identities=23% Similarity=0.183 Sum_probs=51.3
Q ss_pred ecCccEEEEcCCHHHHHHHHHHHHhCCCcEEEEcCCCCCCCCcccCCCCccceEEEEcCCCCC
Q psy4717 27 FIGTRYWCITESTEDVEKVVQVAHDHNLVIIPFGGGTNVTGAVACPENELRTIISLDTSQMQS 89 (90)
Q Consensus 27 ~~~p~~vv~P~s~~~v~~vv~~a~~~~i~v~~~G~G~n~~~~~~~~~~~~~~gvvIdl~~m~~ 89 (90)
...|.+|++|+|++||+++|++|+++++|+.++|||||+.+.+.. +.++|++|||++|++
T Consensus 40 ~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~v~ggGh~~~~~~~~---~~~~gvvIdl~~l~~ 99 (503)
T 1zr6_A 40 DYDPAAIAIPRSTEDIAAAVQCGLDAGVQISAKGGGHSYGSYGFG---GEDGHLMLELDRMYR 99 (503)
T ss_dssp CCCCSEEEECCSHHHHHHHHHHHHHHTCCEEEESSCCCTTCTTTT---SSSSCEEEECTTCCC
T ss_pred cCCCCEEEEeCCHHHHHHHHHHHHHcCCeEEEECCCcCCCCCccc---CCCCcEEEECccCCC
Confidence 356999999999999999999999999999999999999865431 112589999999985
No 20
>2bvf_A 6-hydroxy-D-nicotine oxidase; autoflavinylation, enantiomeric substrates, flavoenzymes, NI degradation; HET: FAD; 1.92A {Arthrobacter nicotinovorans} PDB: 2bvg_A* 2bvh_A*
Probab=99.20 E-value=3.1e-11 Score=90.42 Aligned_cols=59 Identities=31% Similarity=0.259 Sum_probs=51.6
Q ss_pred eecCccEEEEcCCHHHHHHHHHHHHhCCCcEEEEcCCCCCCCCcccCCCCccceEEEEcCCCCC
Q psy4717 26 IFIGTRYWCITESTEDVEKVVQVAHDHNLVIIPFGGGTNVTGAVACPENELRTIISLDTSQMQS 89 (90)
Q Consensus 26 ~~~~p~~vv~P~s~~~v~~vv~~a~~~~i~v~~~G~G~n~~~~~~~~~~~~~~gvvIdl~~m~~ 89 (90)
+...|++|+.|+|++||+++|++|+++++|+.++|||||+.+... .. +|++|||++|++
T Consensus 35 ~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~v~ggGh~~~~~~~-~~----~gvvi~l~~l~~ 93 (459)
T 2bvf_A 35 HLQRPSLIARCLSAGDVAKSVRYACDNGLEISVRSGGHNPNGYAT-ND----GGIVLDLRLMNS 93 (459)
T ss_dssp CCCCCSEEEECCSHHHHHHHHHHHHHHTCCEEEESSCCCTTCTTC-CS----SSEEEECTTCCC
T ss_pred ccCCCCEEEecCCHHHHHHHHHHHHHcCCcEEEEcCCcCCCCccc-cC----CeEEEECCCCCC
Confidence 345699999999999999999999999999999999999986553 22 489999999985
No 21
>1uxy_A MURB, uridine diphospho-N-acetylenolpyruvylglucosamine reductase; peptidoglycan synthesis, cell WALL, cell division, oxidoreductase, NADP; HET: FAD EPU; 1.80A {Escherichia coli} SCOP: d.145.1.2 d.146.1.1 PDB: 1mbb_A* 1mbt_A* 2q85_A* 2mbr_A*
Probab=99.16 E-value=5e-11 Score=87.10 Aligned_cols=61 Identities=15% Similarity=0.126 Sum_probs=51.1
Q ss_pred cceeeecC--ccEEEEcCCHHHHHHHHHHHHhCCCcEEEEcCCCCCCCCcccCCCCccceEEEEcCCCCC
Q psy4717 22 NHQAIFIG--TRYWCITESTEDVEKVVQVAHDHNLVIIPFGGGTNVTGAVACPENELRTIISLDTSQMQS 89 (90)
Q Consensus 22 ~~~~~~~~--p~~vv~P~s~~~v~~vv~~a~~~~i~v~~~G~G~n~~~~~~~~~~~~~~gvvIdl~~m~~ 89 (90)
.|++|+++ |+++++|+|++||++++++|+++++|++++|+|||+.. .++ + +|+||+++ |++
T Consensus 5 ~~tt~~igg~a~~~v~p~s~eel~~~l~~a~~~~~pv~vlGgGSnll~----~d~-~-~GvVI~l~-~~~ 67 (340)
T 1uxy_A 5 PWNTFGIDHNAQHIVCAEDEQQLLNAWQYATAEGQPVLILGEGSNVLF----LED-Y-RGTVIINR-IKG 67 (340)
T ss_dssp GGSTTCCCCBEEEEEEESSHHHHHHHHHHHHHTTCCEEEESSCTTEEE----CSC-E-EEEEEEEC-CCC
T ss_pred ccccCCCCccccEEEEeCCHHHHHHHHHHHHHcCCCEEEECCCcCCcc----cCC-C-CeEEEEcc-CCC
Confidence 45667754 89999999999999999999999999999999999963 233 3 59999996 653
No 22
>3i99_A UDP-N-acetylenolpyruvoylglucosamine reductase; structural genomics, center for structural of infectious diseases, csgid; HET: FAD; 2.20A {Vibrio cholerae}
Probab=99.14 E-value=2.2e-11 Score=89.65 Aligned_cols=61 Identities=16% Similarity=0.128 Sum_probs=51.5
Q ss_pred cceeeecC--ccEEEEcCCHHHHHHHHHHHHhCCCcEEEEcCCCCCCCCcccCCCCccceEEEEcCCCCC
Q psy4717 22 NHQAIFIG--TRYWCITESTEDVEKVVQVAHDHNLVIIPFGGGTNVTGAVACPENELRTIISLDTSQMQS 89 (90)
Q Consensus 22 ~~~~~~~~--p~~vv~P~s~~~v~~vv~~a~~~~i~v~~~G~G~n~~~~~~~~~~~~~~gvvIdl~~m~~ 89 (90)
.|++|+++ |+++++|+|++||++++++|+++++|++++|+|||+.. .++ + +|+||+++ |++
T Consensus 21 ~~tt~~igg~a~~vv~p~s~eel~~~v~~a~~~~ipv~vlGgGSNll~----~d~-~-~GvVI~l~-~~~ 83 (357)
T 3i99_A 21 PYHTFGIEQLAAQLVVAESIDDLKALYCSAEWASLPKLIIGKGSNMLF----TCH-Y-TGMIVVNR-LNG 83 (357)
T ss_dssp GGSTTCCSCEEEEEEEECSHHHHHHHHSSSTTTTSCEEEESSCTTEEE----CSC-E-EEEEEEEC-CCC
T ss_pred hhccCCCCccceEEEEECCHHHHHHHHHHHHHcCCCEEEECCCcCccc----CCC-C-CeEEEEcC-CCc
Confidence 45667765 89999999999999999999999999999999999963 233 3 49999997 764
No 23
>4feh_A Oxidoreductase DPRE1; alpha+beta, decaprenylphosphoryl-beta-D-RIBO; HET: FAD; 2.04A {Mycobacterium tuberculosis} PDB: 4fdo_A* 4fdn_A* 4fdp_A* 4ff6_A* 4aut_A* 4f4q_A* 4g3t_A 4g3u_A
Probab=99.06 E-value=3.7e-10 Score=85.56 Aligned_cols=57 Identities=14% Similarity=0.063 Sum_probs=49.8
Q ss_pred cCccEEEEcCCHHHHHHHHHHHHhC--CCcEEEEcCCCCCCCCcccCCCCccceEEEEcCCCCC
Q psy4717 28 IGTRYWCITESTEDVEKVVQVAHDH--NLVIIPFGGGTNVTGAVACPENELRTIISLDTSQMQS 89 (90)
Q Consensus 28 ~~p~~vv~P~s~~~v~~vv~~a~~~--~i~v~~~G~G~n~~~~~~~~~~~~~~gvvIdl~~m~~ 89 (90)
..|+++++|+|++||+++|++|+++ ++|+.++|+|||+.+.+. +. +|++|||++||+
T Consensus 41 ~~p~~vv~P~s~eev~~~v~~a~~~~~~~~v~~~G~G~s~~~~~~-~~----~gvvIdl~~l~~ 99 (481)
T 4feh_A 41 PSVANVLRTPDAEMIVKAVARVAESGGGRGAIARGLGRSYGDNAQ-NG----GGLVIDMTPLNT 99 (481)
T ss_dssp CEEEEEEECSCHHHHHHHHHHHHTTTCTTCEEEECSSCSSSSTTC-CT----TSEEEECTTCCC
T ss_pred CCCCEEEeCCCHHHHHHHHHHHHHcCCCceEEEEeCCcCCCCCCC-Cc----CeEEEECccCCC
Confidence 3499999999999999999999999 799999999999965553 33 489999999985
No 24
>3js8_A Cholesterol oxidase; cholsterol, organic solvent stability, oxygen channel, FAD, flavoprotein, oxidoreductase; HET: FAD SUC; 1.54A {Chromobacterium SP}
Probab=99.05 E-value=3.2e-10 Score=87.22 Aligned_cols=59 Identities=24% Similarity=0.318 Sum_probs=49.5
Q ss_pred eecCccEEEEcCCHHHHHHHHHHHHhCCCcEEEEcCCCCCC-----CCcccCCCCccceEEEEcC-CCCC
Q psy4717 26 IFIGTRYWCITESTEDVEKVVQVAHDHNLVIIPFGGGTNVT-----GAVACPENELRTIISLDTS-QMQS 89 (90)
Q Consensus 26 ~~~~p~~vv~P~s~~~v~~vv~~a~~~~i~v~~~G~G~n~~-----~~~~~~~~~~~~gvvIdl~-~m~~ 89 (90)
+...|+++++|+|++||+++|++|+++++|+.++|+|||+. ++. +.+ +||+|||+ +||+
T Consensus 26 ~~~~P~~vv~P~s~eEV~~~Vk~A~~~~~pv~v~GgGhs~~~l~~~gG~-~~~----~GVvIdls~~Ln~ 90 (540)
T 3js8_A 26 IKVDDVWTCAPRSADEVVKVANWAKDNGYKVRARGMMHNWSPLTLAAGV-SCP----AVVLLDTTRYLTA 90 (540)
T ss_dssp CEEEEEEEECCSSHHHHHHHHHHHHHHTCEEEEECSCCCSSCSSCCTTC-SSC----SEEEEETTTTCCC
T ss_pred cCCCccEEEEcCCHHHHHHHHHHHHHcCCeEEEEeCCCCcccccccCCC-CCC----CeEEEECcCcCCC
Confidence 34459999999999999999999999999999999999996 333 122 58999995 6875
No 25
>2i0k_A Oxidoreductase; MIX alpha beta, covalent FAD, flavoenzyme; HET: FAD; 1.60A {Brevibacterium sterolicum} SCOP: d.58.32.3 d.145.1.1 PDB: 1i19_A*
Probab=99.02 E-value=6e-10 Score=85.60 Aligned_cols=64 Identities=22% Similarity=0.392 Sum_probs=50.4
Q ss_pred eecCccEEEEcCCHHHHHHHHHHHHhCCCcEEEEcCCCCCCCCcccCCCCccceEEEEc-CCCCC
Q psy4717 26 IFIGTRYWCITESTEDVEKVVQVAHDHNLVIIPFGGGTNVTGAVACPENELRTIISLDT-SQMQS 89 (90)
Q Consensus 26 ~~~~p~~vv~P~s~~~v~~vv~~a~~~~i~v~~~G~G~n~~~~~~~~~~~~~~gvvIdl-~~m~~ 89 (90)
+...|.+|+.|+|++||+++|++|+++++|+.++|+|||+.+.+...+....+|++||| ++||+
T Consensus 32 ~~~~p~~vv~P~s~~ev~~~v~~a~~~~~~v~~~G~G~s~~~~~l~~~~~~~~gvvIdl~~~l~~ 96 (561)
T 2i0k_A 32 IMLDATWVCSPKTPQDVVRLANWAHEHDYKIRPRGAMAGWTPLTVEKGANVEKVILADTMTHLNG 96 (561)
T ss_dssp SEEEEEEEECCSSHHHHHHHHHHHHHHTCEEEEECCCCCCCTTSSCTTCCCTTEEEEECTTTSCC
T ss_pred cCCCCCEEEecCCHHHHHHHHHHHHHCCCcEEEECCCCCcccccccCCCcCCCeEEEechhhCCc
Confidence 44459999999999999999999999999999999999985433211100114899999 88875
No 26
>2gqt_A UDP-N-acetylenolpyruvylglucosamine reductase; peptidoglycan biosynthesis, enolpyruvyl-UDP-N- acetylglucosamine, flavin adenine dinucleotide; HET: FAD; 1.30A {Thermus caldophilus} PDB: 2gqu_A*
Probab=98.94 E-value=5.6e-10 Score=79.32 Aligned_cols=57 Identities=12% Similarity=0.219 Sum_probs=45.9
Q ss_pred cceeeecC--ccEEEEcCCHHHHHHHHHHHHhCCCcEEEEcCCCCCCCCcccCCCCccceEEEEcCCCCC
Q psy4717 22 NHQAIFIG--TRYWCITESTEDVEKVVQVAHDHNLVIIPFGGGTNVTGAVACPENELRTIISLDTSQMQS 89 (90)
Q Consensus 22 ~~~~~~~~--p~~vv~P~s~~~v~~vv~~a~~~~i~v~~~G~G~n~~~~~~~~~~~~~~gvvIdl~~m~~ 89 (90)
.|++|+++ |+ +++|+|++||++++ ++|++++|+|||+.. .++++++|++|++++|++
T Consensus 13 ~~tt~~igg~a~-vv~p~s~edv~~~v------~ipv~v~GgGsnll~----~d~~~~~GvVI~l~~~~~ 71 (268)
T 2gqt_A 13 DYTTLGVGGPAE-LWTVETREELKRAT------EAPYRVLGNGSNLLV----LDEGVPERVIRLAGEFQT 71 (268)
T ss_dssp GGSSSCCCCEEE-EEEECSHHHHHHHT------TSCEEECSSSSSEEE----CTTCCSSEEEEECGGGGC
T ss_pred HhcccccCcceE-EEEeCCHHHHHHHh------CCCeEEcCCCcCcee----cCCCcCCeEEEEcCCCCC
Confidence 44667754 67 99999999999999 899999999999974 334444599999987764
No 27
>2vfr_A Xylitol oxidase, alditol oxidase; FAD, sugar, polyol, flavin, flavoprotein, oxidoreductase; HET: FAD; 1.1A {Streptomyces coelicolor} PDB: 2vfs_A* 2vft_A* 2vfu_A* 2vfv_A*
Probab=98.83 E-value=1.8e-09 Score=80.01 Aligned_cols=59 Identities=14% Similarity=0.150 Sum_probs=49.8
Q ss_pred ceeeecCccEEEEcCCHHHHHHHHHHHHhCCCcEEEEcCCCCCCCCcccCCCCccceEEEEcCCCCC
Q psy4717 23 HQAIFIGTRYWCITESTEDVEKVVQVAHDHNLVIIPFGGGTNVTGAVACPENELRTIISLDTSQMQS 89 (90)
Q Consensus 23 ~~~~~~~p~~vv~P~s~~~v~~vv~~a~~~~i~v~~~G~G~n~~~~~~~~~~~~~~gvvIdl~~m~~ 89 (90)
...++..|.+|+.|+|++||++++++| +|+.++|+||++.+... +.. +|++|||++||+
T Consensus 14 ~~~~~~~p~~v~~P~s~~ev~~~v~~a----~~v~~~G~G~s~~~~~~-~~~---~g~vi~l~~l~~ 72 (422)
T 2vfr_A 14 AGNITYTAKELLRPHSLDALRALVADS----ARVRVLGSGHSFNEIAE-PGD---GGVLLSLAGLPS 72 (422)
T ss_dssp SSSCBCSCSSCBCCSSHHHHHHHHHHC----SSEEECSSCCCCSSTTC-CCT---TCEEECSTTSCC
T ss_pred CCCccCCCCEEEeCCCHHHHHHHHHhC----CCEEEEECCCCCCCCcc-CCC---CcEEEEhhhCCC
Confidence 344667799999999999999999999 89999999999887664 212 589999999985
No 28
>1ffv_C CUTM, flavoprotein of carbon monoxide dehydrogenase; hydrolase; HET: ARO PCD FAD; 2.25A {Hydrogenophaga pseudoflava} SCOP: d.87.2.1 d.145.1.3 PDB: 1ffu_C*
Probab=95.52 E-value=0.015 Score=41.02 Aligned_cols=52 Identities=8% Similarity=0.026 Sum_probs=37.3
Q ss_pred cEEEEcCCHHHHHHHHHHHHhCCCcEEEEcCCCCCCCCcccCCCCccceEEEEcCCC
Q psy4717 31 RYWCITESTEDVEKVVQVAHDHNLVIIPFGGGTNVTGAVACPENELRTIISLDTSQM 87 (90)
Q Consensus 31 ~~vv~P~s~~~v~~vv~~a~~~~i~v~~~G~G~n~~~~~~~~~~~~~~gvvIdl~~m 87 (90)
--++.|+|.+|+.++++.. +.+..++|||||+.-.. .++....+++||+.++
T Consensus 6 ~~~~~P~s~~ea~~ll~~~---~~~~~ilaGGT~ll~~~--~~~~~~~~~lIdl~~i 57 (287)
T 1ffv_C 6 FEYHAPKSVGEAVALLGQL---GSDAKLLAGGHSLLPMM--KLRFAQPEHLIDINRI 57 (287)
T ss_dssp CEEECCSSHHHHHHHHHHH---GGGEEEESSCTTHHHHH--HTTSCCCSEEEECTTC
T ss_pred ceEECCCCHHHHHHHHHhc---CCCCEEEECchHHHHHH--hcCCCCCCEEEECCCC
Confidence 3478999999999999754 36799999999984211 1222224799999753
No 29
>1n62_C Carbon monoxide dehydrogenase medium chain; CODH, molybdenum, molybdopterin, oxidoreductase; HET: CUB MCN FAD; 1.09A {Oligotropha carboxidovorans} SCOP: d.87.2.1 d.145.1.3 PDB: 1n5w_C* 1n61_C* 1n60_C* 1n63_C* 1zxi_C*
Probab=89.93 E-value=0.23 Score=34.85 Aligned_cols=51 Identities=12% Similarity=0.109 Sum_probs=35.4
Q ss_pred EEEEcCCHHHHHHHHHHHHhCCCcEEEEcCCCCCCCCcccCCCCccceEEEEcCCC
Q psy4717 32 YWCITESTEDVEKVVQVAHDHNLVIIPFGGGTNVTGAVACPENELRTIISLDTSQM 87 (90)
Q Consensus 32 ~vv~P~s~~~v~~vv~~a~~~~i~v~~~G~G~n~~~~~~~~~~~~~~gvvIdl~~m 87 (90)
-++.|+|.+|+.++++.. +-+..+++|||++.-.. ..+.....++||++++
T Consensus 7 ~~~~P~sl~ea~~ll~~~---~~~a~~laGGT~l~~~~--k~~~~~~~~lIdl~~i 57 (288)
T 1n62_C 7 DYHRPKSIADAVALLTKL---GEDARPLAGGHSLIPIM--KTRLATPEHLVDLRDI 57 (288)
T ss_dssp EEECCSSHHHHHHHHHHH---GGGEEEESSCTTHHHHH--HTTSCCCSEEEECTTC
T ss_pred EEECcCCHHHHHHHHHhc---CCCCEEEECchHHHHHH--hcCCCCCCEEEECCCC
Confidence 478999999999988633 34688999999974211 1111124799999764
No 30
>2w3s_A Xanthine dehydrogenase; XO, XDH, GOUT, iron, 2Fe-2S, iron-sulfur, oxidoreductase, purine metabolism, molybdenum cofactor, hypoxanthine; HET: MPN FAD XAN; 2.60A {Rhodobacter capsulatus} PDB: 2w3r_A* 2w54_A* 2w55_A* 1jro_A* 1jrp_A*
Probab=86.64 E-value=0.29 Score=36.85 Aligned_cols=51 Identities=14% Similarity=-0.018 Sum_probs=35.6
Q ss_pred cEEEEcCCHHHHHHHHHHHHhCCCcEEEEcCCCCCCCCcccCCCCccceEEEEcCCC
Q psy4717 31 RYWCITESTEDVEKVVQVAHDHNLVIIPFGGGTNVTGAVACPENELRTIISLDTSQM 87 (90)
Q Consensus 31 ~~vv~P~s~~~v~~vv~~a~~~~i~v~~~G~G~n~~~~~~~~~~~~~~gvvIdl~~m 87 (90)
..++.|+|.+|+.++++.. . +..+++|||++.-.. .++....+++||+.++
T Consensus 178 ~~y~~P~sl~ea~~ll~~~---~-~a~ilaGGT~L~~~~--k~~~~~~~~lIdl~~i 228 (462)
T 2w3s_A 178 APAFLPETSDALADWYLAH---P-EATLIAGGTDVSLWV--TKALRDLPEVAFLSHC 228 (462)
T ss_dssp -CCBCCSSHHHHHHHHHHC---T-TCEEESSCTTTTHHH--HTSCCCCCSEEECTTC
T ss_pred cEEEecCCHHHHHHHHhhC---C-CCEEEeCCchhhhhh--hccCCCCCEEEEcCCC
Confidence 4578999999999998753 2 578899999985221 1222224789999774
No 31
>1yht_A DSPB; beta barrel, hydrolase; 2.00A {Aggregatibacter actinomycetemcomitans} SCOP: c.1.8.6
Probab=84.07 E-value=0.89 Score=33.01 Aligned_cols=23 Identities=17% Similarity=0.277 Sum_probs=21.0
Q ss_pred CCHHHHHHHHHHHHhCCCcEEEE
Q psy4717 37 ESTEDVEKVVQVAHDHNLVIIPF 59 (90)
Q Consensus 37 ~s~~~v~~vv~~a~~~~i~v~~~ 59 (90)
=|.+|+++++++|++.+|.|+|-
T Consensus 92 YT~~di~eiv~YA~~rgI~VIPE 114 (367)
T 1yht_A 92 LSYRQLDDIKAYAKAKGIELIPE 114 (367)
T ss_dssp BCHHHHHHHHHHHHHTTCEEEEE
T ss_pred cCHHHHHHHHHHHHHcCCEEEEe
Confidence 37899999999999999999984
No 32
>3nvz_B Xanthine dehydrogenase/oxidase; hydroxylase, homodimer, xanthine oxidase, indole-3-aldehyde, oxidoreductase; HET: FAD MTE I3A; 1.60A {Bos taurus} PDB: 3eub_B* 3etr_B* 3ns1_B* 3nrz_B* 3rca_B* 3sr6_B* 3nvw_B* 3nvv_B* 3nvy_B*
Probab=81.72 E-value=1.2 Score=31.47 Aligned_cols=56 Identities=7% Similarity=-0.021 Sum_probs=37.0
Q ss_pred eecCccEEEEcCCHHHHHHHHHHHHhCCCcEEEEcCCCCCCCCcccCCCCccceEEEEcCCC
Q psy4717 26 IFIGTRYWCITESTEDVEKVVQVAHDHNLVIIPFGGGTNVTGAVACPENELRTIISLDTSQM 87 (90)
Q Consensus 26 ~~~~p~~vv~P~s~~~v~~vv~~a~~~~i~v~~~G~G~n~~~~~~~~~~~~~~gvvIdl~~m 87 (90)
+...+..++.|+|.+|+.++++. +. ...+++|||++..... .+......+||++++
T Consensus 6 ~~g~~~~y~~P~sl~ea~~ll~~---~~-~a~~laGGT~l~~~~k--~~~~~~~~lIdl~~i 61 (305)
T 3nvz_B 6 FEGERVTWIQASTLKELLDLKAQ---HP-EAKLVVGNTEIGIEMK--FKNQLFPMIICPAWI 61 (305)
T ss_dssp EECSSCEEEECCSHHHHHHHHHH---CT-TCEECSSCTTHHHHHH--HSCCCCSEEEECTTC
T ss_pred ecCCCeEEEccCCHHHHHHHHHh---CC-CCEEEECccHHHHHHh--cCCCCCCEEEECCCC
Confidence 44446779999999999888743 22 3688899999842110 011113689999865
No 33
>2yl5_A Beta-N-acetylhexosaminidase; hydrolase; 2.15A {Streptococcus pneumoniae} PDB: 2yla_A* 2yl9_A*
Probab=80.78 E-value=1.3 Score=32.94 Aligned_cols=27 Identities=19% Similarity=0.433 Sum_probs=22.9
Q ss_pred CHHHHHHHHHHHHhCCCcEEEE--cCCCC
Q psy4717 38 STEDVEKVVQVAHDHNLVIIPF--GGGTN 64 (90)
Q Consensus 38 s~~~v~~vv~~a~~~~i~v~~~--G~G~n 64 (90)
|.+|+++|+++|++.+|.|+|- .=||.
T Consensus 93 T~~di~eIv~YA~~rgI~VIPEID~PGH~ 121 (442)
T 2yl5_A 93 TQAEVTELIEYAKSKDIGLIPAINSPGHM 121 (442)
T ss_dssp CHHHHHHHHHHHHTTTCEEEEEEEESSSC
T ss_pred CHHHHHHHHHHHHHcCCeeeeecccchhH
Confidence 7899999999999999999984 23554
No 34
>2lnd_A De novo designed protein, PFK fold; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=79.93 E-value=2.9 Score=24.85 Aligned_cols=35 Identities=20% Similarity=0.442 Sum_probs=30.1
Q ss_pred cEEEEcCCHHHHHHHHHHHHhCCCcEEEEcCCCCC
Q psy4717 31 RYWCITESTEDVEKVVQVAHDHNLVIIPFGGGTNV 65 (90)
Q Consensus 31 ~~vv~P~s~~~v~~vv~~a~~~~i~v~~~G~G~n~ 65 (90)
+++-...|.+|+..+++-.+++|.|++++=.|.+.
T Consensus 29 ryirtatssqdirdiiksmkdngkplvvfvngasq 63 (112)
T 2lnd_A 29 RYIRTATSSQDIRDIIKSMKDNGKPLVVFVNGASQ 63 (112)
T ss_dssp TTEEEECSHHHHHHHHHHHTTCCSCEEEEECSCCH
T ss_pred ceeeeccchhhHHHHHHHHHhcCCeEEEEecCccc
Confidence 45667889999999999999999999998777653
No 35
>2yl6_A Beta-N-acetylhexosaminidase; peptidoglycan-anchor, hydrolase; HET: ETE; 1.60A {Streptococcus pneumoniae} PDB: 2yll_A* 2yl8_A* 3rpm_A*
Probab=79.78 E-value=1.2 Score=32.95 Aligned_cols=22 Identities=18% Similarity=0.447 Sum_probs=20.4
Q ss_pred CHHHHHHHHHHHHhCCCcEEEE
Q psy4717 38 STEDVEKVVQVAHDHNLVIIPF 59 (90)
Q Consensus 38 s~~~v~~vv~~a~~~~i~v~~~ 59 (90)
|.+|+++++++|++.+|.|+|=
T Consensus 90 T~~di~eIv~YA~~rgI~VIPE 111 (434)
T 2yl6_A 90 TESQMTDLINYAKDKGIGLIPT 111 (434)
T ss_dssp EHHHHHHHHHHHHHTTCEEEEE
T ss_pred CHHHHHHHHHHHHHcCCEEEEe
Confidence 6699999999999999999984
No 36
>2g2c_A Putative molybdenum cofactor biosynthesis protein; structural genomics, PSI, protein structure initiative; 1.50A {Corynebacterium diphtheriae} SCOP: c.57.1.1
Probab=79.61 E-value=4.9 Score=25.66 Aligned_cols=36 Identities=19% Similarity=0.255 Sum_probs=31.4
Q ss_pred cEEEEcCCHHHHHHHHHHHHhCCCcEEEEcCCCCCC
Q psy4717 31 RYWCITESTEDVEKVVQVAHDHNLVIIPFGGGTNVT 66 (90)
Q Consensus 31 ~~vv~P~s~~~v~~vv~~a~~~~i~v~~~G~G~n~~ 66 (90)
...+.|.+.+++.+.++.+.+.+..+++..||++..
T Consensus 47 ~~~iv~Dd~~~I~~~l~~a~~~~~DlVittGG~g~~ 82 (167)
T 2g2c_A 47 SEVVVPEGYDTVVEAIATALKQGARFIITAGGTGIR 82 (167)
T ss_dssp EEEEECSSHHHHHHHHHHHHHTTCSEEEEESCCSSS
T ss_pred EEEEeCCCHHHHHHHHHHHHhCCCCEEEECCCCCCC
Confidence 457889999999999998887668899999999885
No 37
>3hrd_C Nicotinate dehydrogenase FAD-subunit; selenium ligand, iron, iron-sulfur, metal-binding, oxidoreductase; HET: MCN FAD; 2.20A {Eubacterium barkeri}
Probab=78.77 E-value=1.5 Score=30.87 Aligned_cols=51 Identities=10% Similarity=0.179 Sum_probs=33.8
Q ss_pred EEEEcCCHHHHHHHHHHHHhCCC-cEEEEcCCCCCCCCcccCCCCccceEEEEcCCC
Q psy4717 32 YWCITESTEDVEKVVQVAHDHNL-VIIPFGGGTNVTGAVACPENELRTIISLDTSQM 87 (90)
Q Consensus 32 ~vv~P~s~~~v~~vv~~a~~~~i-~v~~~G~G~n~~~~~~~~~~~~~~gvvIdl~~m 87 (90)
-++.|+|.+|+.++++ +++- ...+++|||++.... ..+......+||++++
T Consensus 5 ~y~~P~sl~ea~~ll~---~~~~~~a~~laGGT~l~~~~--k~~~~~~~~lIdl~~i 56 (296)
T 3hrd_C 5 EFFAPKTLEEAKGLLH---QYKDVPPAIIAGGTDLVIEI--NDRWEKPDVVIDIKKL 56 (296)
T ss_dssp EEECCSSHHHHHHHHH---HTTTSCCEEESSCTTHHHHH--HTTSCCCSEEEECTTC
T ss_pred eEeCCCCHHHHHHHHH---hCCCCCeEEEECCcHHHHHh--hcCCCCCCeEEEcccC
Confidence 4789999999887764 4433 467889999984211 1111124689999875
No 38
>1mkz_A Molybdenum cofactor biosynthesis protein B; MAD, WEAK anomalous signal, molybdopterin synthesis, structural genomics, PSI; HET: MSE; 1.60A {Escherichia coli} SCOP: c.57.1.1 PDB: 1r2k_B
Probab=77.27 E-value=6.3 Score=25.34 Aligned_cols=36 Identities=17% Similarity=0.216 Sum_probs=31.0
Q ss_pred cEEEEcCCHHHHHHHHHHHHhC-CCcEEEEcCCCCCC
Q psy4717 31 RYWCITESTEDVEKVVQVAHDH-NLVIIPFGGGTNVT 66 (90)
Q Consensus 31 ~~vv~P~s~~~v~~vv~~a~~~-~i~v~~~G~G~n~~ 66 (90)
...+.|.+.+++.+.++.+.+. +..+++..||++..
T Consensus 46 ~~~iv~Dd~~~i~~~l~~a~~~~~~DlVittGG~g~~ 82 (172)
T 1mkz_A 46 DKAIVKENRYAIRAQVSAWIASDDVQVVLITGGTGLT 82 (172)
T ss_dssp EEEEECSCHHHHHHHHHHHHHSSSCCEEEEESCCSSS
T ss_pred EEEEeCCCHHHHHHHHHHHHhcCCCCEEEeCCCCCCC
Confidence 3568899999999999988775 68899999999885
No 39
>2gjx_A Beta-hexosaminidase alpha chain; beta-hexosaminidase A, glycosidase, TAY-sachs disease, GM2 ganglisode, TIM barrel, hydrolase; HET: NAG BMA NDG; 2.80A {Homo sapiens} SCOP: c.1.8.6 d.92.2.1 PDB: 2gk1_A*
Probab=77.12 E-value=2 Score=32.51 Aligned_cols=30 Identities=17% Similarity=0.311 Sum_probs=25.1
Q ss_pred CHHHHHHHHHHHHhCCCcEEEE--cCCCCCCC
Q psy4717 38 STEDVEKVVQVAHDHNLVIIPF--GGGTNVTG 67 (90)
Q Consensus 38 s~~~v~~vv~~a~~~~i~v~~~--G~G~n~~~ 67 (90)
|.+|+++++++|++.+|.|+|- .=||....
T Consensus 213 T~~di~eiv~yA~~rgI~VIPEID~PGH~~a~ 244 (507)
T 2gjx_A 213 TAQDVKEVIEYARLRGIRVLAEFDTPGHTLSW 244 (507)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEECCCSSSCTTT
T ss_pred CHHHHHHHHHHHHHcCCEEEECCCCcchHHHH
Confidence 7899999999999999999995 34775543
No 40
>3rcn_A Beta-N-acetylhexosaminidase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta half sandwich; HET: MSE; 2.51A {Arthrobacter aurescens}
Probab=76.47 E-value=2.2 Score=32.78 Aligned_cols=22 Identities=27% Similarity=0.613 Sum_probs=20.8
Q ss_pred CHHHHHHHHHHHHhCCCcEEEE
Q psy4717 38 STEDVEKVVQVAHDHNLVIIPF 59 (90)
Q Consensus 38 s~~~v~~vv~~a~~~~i~v~~~ 59 (90)
|.+|+++++++|++.+|.|+|-
T Consensus 222 T~~di~eIv~YA~~rgI~VIPE 243 (543)
T 3rcn_A 222 TQDDLREIVAFAADRHITVIPE 243 (543)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEE
T ss_pred CHHHHHHHHHHHHHcCCEEeee
Confidence 7899999999999999999984
No 41
>1now_A Beta-hexosaminidase beta chain; (beta/alpha)8-barrel, homodimer, family 20 glycosidase, HYDR; HET: NAG IFG; 2.20A {Homo sapiens} SCOP: c.1.8.6 d.92.2.1 PDB: 1nou_A* 1np0_A* 2gjx_B* 3lmy_A* 1o7a_A* 2gk1_B*
Probab=76.36 E-value=2.2 Score=32.36 Aligned_cols=28 Identities=21% Similarity=0.394 Sum_probs=24.0
Q ss_pred CHHHHHHHHHHHHhCCCcEEEE--cCCCCC
Q psy4717 38 STEDVEKVVQVAHDHNLVIIPF--GGGTNV 65 (90)
Q Consensus 38 s~~~v~~vv~~a~~~~i~v~~~--G~G~n~ 65 (90)
|.+|+++++++|++.+|.|+|- .=||..
T Consensus 218 T~~di~eiv~yA~~rgI~VIPEID~PGH~~ 247 (507)
T 1now_A 218 TPNDVRMVIEYARLRGIRVLPEFDTPGHTL 247 (507)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEEEESSSCT
T ss_pred CHHHHHHHHHHHHHcCCEEEEccCCchhHH
Confidence 7899999999999999999984 446654
No 42
>2is8_A Molybdopterin biosynthesis enzyme, MOAB; globular alpha/beta fold, structu genomics, NPPSFA; 1.64A {Thermus thermophilus} PDB: 3mch_A
Probab=75.88 E-value=7.7 Score=24.65 Aligned_cols=36 Identities=25% Similarity=0.406 Sum_probs=30.8
Q ss_pred cEEEEcCCHHHHHHHHHHHHhC-CCcEEEEcCCCCCC
Q psy4717 31 RYWCITESTEDVEKVVQVAHDH-NLVIIPFGGGTNVT 66 (90)
Q Consensus 31 ~~vv~P~s~~~v~~vv~~a~~~-~i~v~~~G~G~n~~ 66 (90)
...+.|.+.+++++.++.+.+. +..+++..||++..
T Consensus 39 ~~~iv~Dd~~~i~~~l~~~~~~~~~DlVittGG~g~g 75 (164)
T 2is8_A 39 AYELVPDEPPMIKKVLRLWADREGLDLILTNGGTGLA 75 (164)
T ss_dssp EEEEECSCHHHHHHHHHHHHHTSCCSEEEEESCCSSS
T ss_pred EEEEcCCCHHHHHHHHHHHHhcCCCCEEEEcCCCCCC
Confidence 4568899999999999888775 68899999999874
No 43
>3gh5_A HEX1, beta-hexosaminidase; beta-N-acetylhexosaminidase, glycosphingolipids, paenibacill GH20, hydrolase, structural genomics, NPPSFA; HET: NAG; 1.60A {Paenibacillus SP} PDB: 3gh4_A* 3gh7_A* 3sur_A* 3sus_A* 3sut_A* 3suu_A* 3suv_A* 3suw_A*
Probab=75.54 E-value=2.3 Score=32.57 Aligned_cols=22 Identities=23% Similarity=0.434 Sum_probs=20.8
Q ss_pred CHHHHHHHHHHHHhCCCcEEEE
Q psy4717 38 STEDVEKVVQVAHDHNLVIIPF 59 (90)
Q Consensus 38 s~~~v~~vv~~a~~~~i~v~~~ 59 (90)
|.+|+++++++|++.+|.|+|-
T Consensus 254 T~~di~eIv~YA~~rgI~VIPE 275 (525)
T 3gh5_A 254 TQEQFKDIVSYAAERYIEVIPE 275 (525)
T ss_dssp CHHHHHHHHHHHHTTTCEEEEE
T ss_pred CHHHHHHHHHHHHHcCCEEEEE
Confidence 7899999999999999999994
No 44
>1jak_A Beta-N-acetylhexosaminidase; glycoside hydrolase, family 20, substrate-assisted catalysis, alpha/beta barrel, isofagomin inhibitor complex; HET: IFG; 1.75A {Streptomyces plicatus} SCOP: c.1.8.6 d.92.2.1 PDB: 1hp4_A* 1hp5_A* 1m01_A* 1m04_A* 1m03_A*
Probab=75.38 E-value=2.4 Score=32.17 Aligned_cols=22 Identities=18% Similarity=0.431 Sum_probs=20.7
Q ss_pred CHHHHHHHHHHHHhCCCcEEEE
Q psy4717 38 STEDVEKVVQVAHDHNLVIIPF 59 (90)
Q Consensus 38 s~~~v~~vv~~a~~~~i~v~~~ 59 (90)
|.+|+++++++|++.+|.|+|-
T Consensus 229 T~~di~eiv~yA~~rgI~VIPE 250 (512)
T 1jak_A 229 TKAEYKEIVRYAASRHLEVVPE 250 (512)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEE
T ss_pred CHHHHHHHHHHHHHcCCEEEEc
Confidence 7899999999999999999984
No 45
>1uuy_A CNX1, molybdopterin biosynthesis CNX1; chelatase, molybdenum cofactor biosynthesis; HET: MTE AMP; 1.45A {Arabidopsis thaliana} SCOP: c.57.1.1 PDB: 1o8q_A 1o8n_A 1o8o_A 1uux_A* 1eav_A
Probab=75.24 E-value=8 Score=24.60 Aligned_cols=36 Identities=22% Similarity=0.304 Sum_probs=30.7
Q ss_pred cEEEEcCCHHHHHHHHHHHHh-CCCcEEEEcCCCCCC
Q psy4717 31 RYWCITESTEDVEKVVQVAHD-HNLVIIPFGGGTNVT 66 (90)
Q Consensus 31 ~~vv~P~s~~~v~~vv~~a~~-~~i~v~~~G~G~n~~ 66 (90)
...+.|.+.+++++.++.+.+ .+..+++..||++..
T Consensus 48 ~~~iv~Dd~~~i~~~l~~~~~~~~~DlVittGG~g~g 84 (167)
T 1uuy_A 48 ATAVVPDEVERIKDILQKWSDVDEMDLILTLGGTGFT 84 (167)
T ss_dssp EEEEECSCHHHHHHHHHHHHHTSCCSEEEEESCCSSS
T ss_pred EEEEcCCCHHHHHHHHHHHHhcCCCCEEEECCCCCCC
Confidence 456889999999999998875 578899999999874
No 46
>2pjk_A 178AA long hypothetical molybdenum cofactor biosynthesis protein B; 3D-structure, structural genomics, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii} PDB: 3iwt_A*
Probab=75.15 E-value=7.6 Score=25.20 Aligned_cols=36 Identities=19% Similarity=0.213 Sum_probs=30.4
Q ss_pred cEEEEcCCHHHHHHHHHHHHhC-CCcEEEEcCCCCCC
Q psy4717 31 RYWCITESTEDVEKVVQVAHDH-NLVIIPFGGGTNVT 66 (90)
Q Consensus 31 ~~vv~P~s~~~v~~vv~~a~~~-~i~v~~~G~G~n~~ 66 (90)
...+.|.+.+++++.++.+.+. +.-+++..||++..
T Consensus 58 ~~~iv~Dd~~~I~~al~~a~~~~~~DlVittGG~s~g 94 (178)
T 2pjk_A 58 GYSLVPDDKIKILKAFTDALSIDEVDVIISTGGTGYS 94 (178)
T ss_dssp EEEEECSCHHHHHHHHHHHHTCTTCCEEEEESCCSSS
T ss_pred EEEEeCCCHHHHHHHHHHHHhcCCCCEEEECCCCCCC
Confidence 4568899999999999877665 68899999999885
No 47
>1t3q_C Quinoline 2-oxidoreductase medium subunit; QOR, molybdenum, MCD; HET: FAD MCN; 1.80A {Pseudomonas putida} SCOP: d.87.2.1 d.145.1.3
Probab=74.47 E-value=2.3 Score=29.80 Aligned_cols=51 Identities=14% Similarity=0.070 Sum_probs=33.5
Q ss_pred cEEEEcCCHHHHHHHHHHHHhCCCcEEEEcCCCCCCCCcccCCCCccceEEEEcCCC
Q psy4717 31 RYWCITESTEDVEKVVQVAHDHNLVIIPFGGGTNVTGAVACPENELRTIISLDTSQM 87 (90)
Q Consensus 31 ~~vv~P~s~~~v~~vv~~a~~~~i~v~~~G~G~n~~~~~~~~~~~~~~gvvIdl~~m 87 (90)
--++.|+|.+|+.++++- +-...+++|||++.-... .+......+||++++
T Consensus 6 f~y~~P~sl~ea~~ll~~----~~~a~~laGGT~l~~~~k--~~~~~~~~lIdl~~i 56 (288)
T 1t3q_C 6 FSYRAPASLQEVIQVLAD----DPDARIIAGGQSLLPLLA--FRLVYPSCLVDLRNV 56 (288)
T ss_dssp CEEECCSSHHHHHHHHHH----CTTCEEESSCTTHHHHHH--TTCCCCSEEEECTTC
T ss_pred ceEECCCCHHHHHHHHhh----CCCCEEEeCchhHHHHHh--cCCCCCCEEEECCCC
Confidence 347899999999998863 234677899999632110 011113689999875
No 48
>2egz_A 3-dehydroquinate dehydratase; aquifex aeolicus VF5, structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: TLA; 1.75A {Aquifex aeolicus} PDB: 2ysw_A
Probab=74.41 E-value=3.1 Score=28.00 Aligned_cols=34 Identities=18% Similarity=0.161 Sum_probs=30.3
Q ss_pred ccEEEEcCCHHHHHHHHHHHHhCCCcEEEEcCCC
Q psy4717 30 TRYWCITESTEDVEKVVQVAHDHNLVIIPFGGGT 63 (90)
Q Consensus 30 p~~vv~P~s~~~v~~vv~~a~~~~i~v~~~G~G~ 63 (90)
++.++.|++.+|+..++++.++...|++.++-|.
T Consensus 141 vKia~~a~~~~D~l~ll~~~~~~~~P~I~~~MG~ 174 (219)
T 2egz_A 141 PKIAVKANSYEDVARLLCISRQVEGEKILISMGD 174 (219)
T ss_dssp EEEEEECSSHHHHHHHHHHHTTSCSCBEEEEESS
T ss_pred EEEEEccCCHHHHHHHHHHHHhCCCCEEEEECCC
Confidence 6788999999999999999998889988887665
No 49
>3rfq_A Pterin-4-alpha-carbinolamine dehydratase MOAB2; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: B3P; 2.25A {Mycobacterium marinum} PDB: 3tcr_A
Probab=74.06 E-value=8.6 Score=25.31 Aligned_cols=36 Identities=19% Similarity=0.219 Sum_probs=30.5
Q ss_pred cEEEEcCCHHHHHHHHHHHHhCCCcEEEEcCCCCCC
Q psy4717 31 RYWCITESTEDVEKVVQVAHDHNLVIIPFGGGTNVT 66 (90)
Q Consensus 31 ~~vv~P~s~~~v~~vv~~a~~~~i~v~~~G~G~n~~ 66 (90)
...+.|.+.+++++.++.+.+.+..+++..||++..
T Consensus 67 ~~~iv~Dd~~~I~~al~~a~~~~~DlVIttGGts~g 102 (185)
T 3rfq_A 67 GVVAVEADEVDIRNALNTAVIGGVDLVVSVGGTGVT 102 (185)
T ss_dssp EEEEECSCHHHHHHHHHHHHHTTCSEEEEESCCSSS
T ss_pred EEEEeCCCHHHHHHHHHHHHhCCCCEEEECCCCCCC
Confidence 456789999999999988765678899999999985
No 50
>3pzy_A MOG; ssgcid, seattle structural genomics center for infectious DI biosynthetic protein; 1.80A {Mycobacterium avium subsp} PDB: 3oi9_A 2g4r_A
Probab=74.04 E-value=6.7 Score=25.11 Aligned_cols=35 Identities=20% Similarity=0.336 Sum_probs=29.3
Q ss_pred cEEEEcCCHHHHHHHHHHHHhCCCcEEEEcCCCCCC
Q psy4717 31 RYWCITESTEDVEKVVQVAHDHNLVIIPFGGGTNVT 66 (90)
Q Consensus 31 ~~vv~P~s~~~v~~vv~~a~~~~i~v~~~G~G~n~~ 66 (90)
...+.|.+ +++++.++.+.+.+..+++..||++..
T Consensus 45 ~~~iv~Dd-~~i~~al~~a~~~~~DlVittGG~s~g 79 (164)
T 3pzy_A 45 QPEVVADG-SPVGEALRKAIDDDVDVILTSGGTGIA 79 (164)
T ss_dssp CCEEECSS-HHHHHHHHHHHHTTCSEEEEESCCSSS
T ss_pred EEEEeCCH-HHHHHHHHHHHhCCCCEEEECCCCCCC
Confidence 34577999 999999988776678899999999885
No 51
>3ozo_A N-acetylglucosaminidase; beta-N-acetyl-D-hexosaminidase, hydrolase-hydrolase inhibito; HET: NGT; 2.00A {Ostrinia furnacalis} PDB: 3nsn_A* 3nsm_A* 3ozp_A* 3s6t_A* 3vtr_A*
Probab=72.59 E-value=3.1 Score=32.19 Aligned_cols=27 Identities=11% Similarity=0.286 Sum_probs=23.1
Q ss_pred CHHHHHHHHHHHHhCCCcEEEE--cCCCC
Q psy4717 38 STEDVEKVVQVAHDHNLVIIPF--GGGTN 64 (90)
Q Consensus 38 s~~~v~~vv~~a~~~~i~v~~~--G~G~n 64 (90)
|.+|+++++++|++.+|.|+|- .=||.
T Consensus 254 T~~di~eiv~yA~~rgI~VIPEId~PGH~ 282 (572)
T 3ozo_A 254 TKAAIREVVRFGLERGVRVLPEFDAPAHV 282 (572)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEEEESSSC
T ss_pred CHHHHHHHHHHHHHhCCceeeeeccchHH
Confidence 7899999999999999999985 33665
No 52
>1y5e_A Molybdenum cofactor biosynthesis protein B; structural genomics, protein structure initiative, PSI, MCSG, midwest center for structural genomics; 1.90A {Bacillus cereus} SCOP: c.57.1.1
Probab=72.34 E-value=9.8 Score=24.25 Aligned_cols=36 Identities=19% Similarity=0.419 Sum_probs=30.5
Q ss_pred cEEEEcCCHHHHHHHHHHHHh-CCCcEEEEcCCCCCC
Q psy4717 31 RYWCITESTEDVEKVVQVAHD-HNLVIIPFGGGTNVT 66 (90)
Q Consensus 31 ~~vv~P~s~~~v~~vv~~a~~-~~i~v~~~G~G~n~~ 66 (90)
...+.|.+.+++++.++.+.+ .+..+++..||++..
T Consensus 49 ~~~iv~Dd~~~i~~~l~~~~~~~~~DlVittGG~g~g 85 (169)
T 1y5e_A 49 SYEIVKDDKESIQQAVLAGYHKEDVDVVLTNGGTGIT 85 (169)
T ss_dssp EEEEECSSHHHHHHHHHHHHTCTTCSEEEEECCCSSS
T ss_pred EEEEeCCCHHHHHHHHHHHHhcCCCCEEEEcCCCCCC
Confidence 457889999999999988876 368899999999885
No 53
>2pbq_A Molybdenum cofactor biosynthesis MOG; molybdopterin, MPT, structural genomics, NPPSFA, national PR protein structural and functional analyses; 1.70A {Aquifex aeolicus} PDB: 2qq1_A 3mci_A 3mcj_A 3k6a_A* 2f7w_A 2f7y_A 2fuw_A
Probab=71.50 E-value=11 Score=24.30 Aligned_cols=36 Identities=25% Similarity=0.345 Sum_probs=30.8
Q ss_pred cEEEEcCCHHHHHHHHHHHHhC-CCcEEEEcCCCCCC
Q psy4717 31 RYWCITESTEDVEKVVQVAHDH-NLVIIPFGGGTNVT 66 (90)
Q Consensus 31 ~~vv~P~s~~~v~~vv~~a~~~-~i~v~~~G~G~n~~ 66 (90)
...+.|.+.+++++.++.+.+. +..+++..||++..
T Consensus 45 ~~~iv~Dd~~~I~~~l~~~~~~~~~DlVittGG~g~g 81 (178)
T 2pbq_A 45 EYRVIPDERDLIEKTLIELADEKGCSLILTTGGTGPA 81 (178)
T ss_dssp EEEEECSCHHHHHHHHHHHHHTSCCSEEEEESCCSSS
T ss_pred EEEEcCCCHHHHHHHHHHHHhcCCCCEEEECCCCCCC
Confidence 4568899999999999888764 68899999999885
No 54
>1xty_A PTH, peptidyl-tRNA hydrolase; mixed beta sheet; 1.80A {Pyrococcus abyssi}
Probab=71.47 E-value=8 Score=23.69 Aligned_cols=35 Identities=17% Similarity=0.155 Sum_probs=30.1
Q ss_pred CccEEEEcCCHHHHHHHHHHHHhCCCcE-EEEcCCC
Q psy4717 29 GTRYWCITESTEDVEKVVQVAHDHNLVI-IPFGGGT 63 (90)
Q Consensus 29 ~p~~vv~P~s~~~v~~vv~~a~~~~i~v-~~~G~G~ 63 (90)
.+..|+...+.+++.++.+.|.+.|++. .++-.|+
T Consensus 54 ~~KiVlk~~~e~el~~l~~~a~~~gl~~~~i~DAG~ 89 (120)
T 1xty_A 54 QPKIIVKVNSLDEIISRAKKAETMNLPFSIIEDAGK 89 (120)
T ss_dssp CCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCSS
T ss_pred CcEEEEecCCHHHHHHHHHHHHHCCCCEEEEEcCCc
Confidence 4899999999999999999999999996 4555564
No 55
>2epl_X N-acetyl-beta-D-glucosaminidase; glycoside hydrolase, family 20, GCNA, hydro; 1.40A {Streptococcus gordonii} PDB: 2epk_X 2epm_X 2epn_A* 2epo_A
Probab=71.25 E-value=3.4 Score=32.21 Aligned_cols=22 Identities=14% Similarity=0.471 Sum_probs=20.9
Q ss_pred CHHHHHHHHHHHHhCCCcEEEE
Q psy4717 38 STEDVEKVVQVAHDHNLVIIPF 59 (90)
Q Consensus 38 s~~~v~~vv~~a~~~~i~v~~~ 59 (90)
|.+|+++++++|++++|.|+|-
T Consensus 143 T~~di~eiv~yA~~rgI~VIPE 164 (627)
T 2epl_X 143 TVAELQEIEDYAADFDMSFVPC 164 (627)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEE
T ss_pred CHHHHHHHHHHHHHcCCEEEEe
Confidence 8899999999999999999995
No 56
>1jlj_A Gephyrin; globular alpha/beta fold, structural protein; 1.60A {Homo sapiens} SCOP: c.57.1.1 PDB: 1ihc_A
Probab=70.03 E-value=12 Score=24.47 Aligned_cols=36 Identities=22% Similarity=0.353 Sum_probs=30.2
Q ss_pred cEEEEcCCHHHHHHHHHHHHh-CCCcEEEEcCCCCCC
Q psy4717 31 RYWCITESTEDVEKVVQVAHD-HNLVIIPFGGGTNVT 66 (90)
Q Consensus 31 ~~vv~P~s~~~v~~vv~~a~~-~~i~v~~~G~G~n~~ 66 (90)
...+.|.+.+++++.++.+.+ .+..+++..||++..
T Consensus 55 ~~~iv~Dd~~~I~~al~~a~~~~~~DlVIttGGtg~g 91 (189)
T 1jlj_A 55 AYKIVPDEIEEIKETLIDWCDEKELNLILTTGGTGFA 91 (189)
T ss_dssp EEEEECSCHHHHHHHHHHHHHTSCCSEEEEESCCSSS
T ss_pred EEEEeCCCHHHHHHHHHHHhhcCCCCEEEEcCCCCCC
Confidence 356889999999999988765 468899999999884
No 57
>1wn2_A Peptidyl-tRNA hydrolase; riken structural genomics/proteomics initiative, structural genomics; 1.20A {Pyrococcus horikoshii} PDB: 2d3k_A
Probab=69.85 E-value=9.1 Score=23.52 Aligned_cols=35 Identities=20% Similarity=0.075 Sum_probs=29.7
Q ss_pred CccEEEEcCCHHHHHHHHHHHHhCCCcEE-EEcCCC
Q psy4717 29 GTRYWCITESTEDVEKVVQVAHDHNLVII-PFGGGT 63 (90)
Q Consensus 29 ~p~~vv~P~s~~~v~~vv~~a~~~~i~v~-~~G~G~ 63 (90)
.|..|+...+.+++.++.+.|.+.|+|.. ++-.|+
T Consensus 55 ~~Kvvlk~~~e~el~~l~~~a~~~gl~~~~i~DAG~ 90 (121)
T 1wn2_A 55 QKKVVVKVESEEELFKLKAEAEKLGLPNALIRDAGL 90 (121)
T ss_dssp CCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECTTC
T ss_pred CcEEEEecCCHHHHHHHHHHHHHCCCCEEEEEcCCc
Confidence 38888999999999999999999999974 445555
No 58
>2ox1_A 3-dehydroquinate dehydratase; (beta-alpha)8 barrel, lyase; 2.33A {Archaeoglobus fulgidus}
Probab=68.79 E-value=7.5 Score=25.70 Aligned_cols=33 Identities=21% Similarity=0.365 Sum_probs=28.9
Q ss_pred ccEEEEcCCHHHHHHHHHHHHhCCCcEEEEcCCC
Q psy4717 30 TRYWCITESTEDVEKVVQVAHDHNLVIIPFGGGT 63 (90)
Q Consensus 30 p~~vv~P~s~~~v~~vv~~a~~~~i~v~~~G~G~ 63 (90)
++.++.|++.+|+..++++.++.. |++.++-|.
T Consensus 121 vKia~~a~~~~D~l~ll~~~~~~~-p~I~~~MG~ 153 (196)
T 2ox1_A 121 VKIATMGKSKRDVETIVRILTNYD-DVVAFLMGE 153 (196)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHCS-SEEEEEESG
T ss_pred EEEEEcCCCHHHHHHHHHHHhhCC-CeEEEEcCC
Confidence 678899999999999999998876 888887665
No 59
>1di6_A MOGA, molybdenum cofactor biosynthetic enzyme; MOCO, MOCO biosynthesis, gephyrin function; 1.45A {Escherichia coli} SCOP: c.57.1.1 PDB: 1di7_A
Probab=68.54 E-value=13 Score=24.59 Aligned_cols=36 Identities=17% Similarity=0.176 Sum_probs=30.7
Q ss_pred cEEEEcCCHHHHHHHHHHHHhC-CCcEEEEcCCCCCC
Q psy4717 31 RYWCITESTEDVEKVVQVAHDH-NLVIIPFGGGTNVT 66 (90)
Q Consensus 31 ~~vv~P~s~~~v~~vv~~a~~~-~i~v~~~G~G~n~~ 66 (90)
...+.|.+.+++++.++.+.+. +..+++..||++..
T Consensus 43 ~~~iV~Dd~~~I~~al~~a~~~~~~DlVitTGGtg~g 79 (195)
T 1di6_A 43 ETRLIPDEQAIIEQTLCELVDEMSCHLVLTTGGTGPA 79 (195)
T ss_dssp EEEEEESCHHHHHHHHHHHHHTSCCSEEEEESCCSSS
T ss_pred EEEEeCCCHHHHHHHHHHHHhcCCCCEEEECCCCCCC
Confidence 3578899999999999887764 68999999999885
No 60
>3hl2_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine, sepsecs, protein-RNA complex, alternative splicing, cytoplasm, protein biosynthesis, pyridoxal phosphate, selenium; HET: PLR SEP; 2.81A {Homo sapiens}
Probab=68.51 E-value=1.9 Score=32.94 Aligned_cols=29 Identities=10% Similarity=0.171 Sum_probs=23.5
Q ss_pred cCCHHHHHHHHHHHHhCCCcEEEEcCCCCC
Q psy4717 36 TESTEDVEKVVQVAHDHNLVIIPFGGGTNV 65 (90)
Q Consensus 36 P~s~~~v~~vv~~a~~~~i~v~~~G~G~n~ 65 (90)
|.+.++|.++.++|+++++|+++= ..|+.
T Consensus 229 p~~~ddI~eIaeIch~~gIpllVD-eAhGa 257 (501)
T 3hl2_A 229 PRVPDRLEELAVICANYDIPHIVN-NAYGV 257 (501)
T ss_dssp TBCCCCHHHHHHHHHHHTCCEEEE-CTTCT
T ss_pred CcccccHHHHHHHHHHcCCeEEEe-Ccchh
Confidence 557789999999999999999985 43433
No 61
>2ozl_B PDHE1-B, pyruvate dehydrogenase E1 component subunit beta; pyruvate_dehydrogenase_complex, human, multienzyme_complex_component; HET: TPP; 1.90A {Homo sapiens} SCOP: c.36.1.7 c.48.1.2 PDB: 1ni4_B* 3exe_B* 3exf_B* 3exg_B 3exh_B* 3exi_B
Probab=67.27 E-value=6.5 Score=28.01 Aligned_cols=31 Identities=13% Similarity=0.096 Sum_probs=27.7
Q ss_pred cEEEEcCCHHHHHHHHHHHHhCCCcEEEEcC
Q psy4717 31 RYWCITESTEDVEKVVQVAHDHNLVIIPFGG 61 (90)
Q Consensus 31 ~~vv~P~s~~~v~~vv~~a~~~~i~v~~~G~ 61 (90)
-.|+.|.+.+|...++++|-+.+-|++++-.
T Consensus 154 l~V~~Psd~~e~~~~l~~a~~~~~Pv~i~~~ 184 (341)
T 2ozl_B 154 LKVVSPWNSEDAKGLIKSAIRDNNPVVVLEN 184 (341)
T ss_dssp CEEECCCSHHHHHHHHHHHHHSSSCEEEEEC
T ss_pred CEEEEeCCHHHHHHHHHHHHhcCCCEEEEEC
Confidence 4689999999999999999999999998754
No 62
>1rzw_A Protein AF2095(GR4); beta-sheet of 4 parallel, anti-parallel beta-strands and 3 alpha-helices, structural genomics, PSI; NMR {Archaeoglobus fulgidus} SCOP: c.131.1.1 PDB: 3erj_A
Probab=66.99 E-value=12 Score=23.13 Aligned_cols=36 Identities=17% Similarity=0.142 Sum_probs=30.6
Q ss_pred CccEEEEcCCHHHHHHHHHHHHhCCCcE-EEEcCCCC
Q psy4717 29 GTRYWCITESTEDVEKVVQVAHDHNLVI-IPFGGGTN 64 (90)
Q Consensus 29 ~p~~vv~P~s~~~v~~vv~~a~~~~i~v-~~~G~G~n 64 (90)
.+..++...+.+++.++.+.|.+.|+|. .++-.|..
T Consensus 48 ~~Kvvlk~~~e~el~~L~~~a~~~gl~~~~I~DAG~T 84 (123)
T 1rzw_A 48 QKKVVLKVKSLEELLGIKHKAESLGLVTGLVQDAGLT 84 (123)
T ss_dssp SSEEEEECSCHHHHHHHHHHHHHTTCCEEEECCTTCC
T ss_pred CcEEEEecCCHHHHHHHHHHHHHCCCCEEEEECCCCc
Confidence 3888899999999999999999999996 55566654
No 63
>3o1n_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, lyase; 1.03A {Salmonella enterica subsp} PDB: 3s42_A 3l2i_A* 3lb0_A 4guf_A 4gug_A* 4guh_A* 3nnt_A* 4guj_A* 3m7w_A 3oex_A 4gfs_A* 4gui_A* 1gqn_A 1l9w_A* 1qfe_A*
Probab=66.24 E-value=7.1 Score=27.25 Aligned_cols=34 Identities=12% Similarity=0.191 Sum_probs=29.3
Q ss_pred ccEEEEcCCHHHHHHHHHHHHh-----CCCcEEEEcCCC
Q psy4717 30 TRYWCITESTEDVEKVVQVAHD-----HNLVIIPFGGGT 63 (90)
Q Consensus 30 p~~vv~P~s~~~v~~vv~~a~~-----~~i~v~~~G~G~ 63 (90)
+..++.|++.+|+..++++..+ .+.|++.++-|.
T Consensus 193 vKia~~a~s~~Dvl~Ll~~~~~~~~~~~~~PlIa~~MG~ 231 (276)
T 3o1n_A 193 PKIAVMPQTKADVLTLLTATVEMQERYADRPIITMSMSK 231 (276)
T ss_dssp EEEEECCSSHHHHHHHHHHHHHHHHHTCCSCCEEEECSG
T ss_pred EEEEecCCChHHHHHHHHHHHHHHhcCCCCCEEEEECCC
Confidence 6889999999999999998765 678999987765
No 64
>4e8j_A Lincosamide resistance protein; structural genomics, antibiotic resistance, center for struc genomics of infectious diseases (csgid); HET: MSE LN0; 1.82A {Staphylococcus haemolyticus} PDB: 4e8i_A* 4fo1_A*
Probab=65.81 E-value=3.6 Score=26.87 Aligned_cols=25 Identities=8% Similarity=0.142 Sum_probs=22.6
Q ss_pred CCHHHHHHHHHHHHhCCCcEEEEcC
Q psy4717 37 ESTEDVEKVVQVAHDHNLVIIPFGG 61 (90)
Q Consensus 37 ~s~~~v~~vv~~a~~~~i~v~~~G~ 61 (90)
-+.+|+.+++++++++++++++.||
T Consensus 6 ~~~~d~~evl~~l~~~~v~~~i~GG 30 (161)
T 4e8j_A 6 VTEKELFYILDLFEHMKVTYWLDGG 30 (161)
T ss_dssp CCHHHHHHHHHHHHHHTCCEEEEHH
T ss_pred cCHHHHHHHHHHHHhCCCcEEEEcH
Confidence 3678999999999999999999887
No 65
>2zv3_A PTH, peptidyl-tRNA hydrolase; cytoplasm, structural genomics, NPPSFA; 2.10A {Methanocaldococcus jannaschii}
Probab=65.69 E-value=8.9 Score=23.30 Aligned_cols=35 Identities=14% Similarity=0.135 Sum_probs=29.2
Q ss_pred CccEEEEcCCHHHHHHHHHHHHhCCCcE-EEEcCCC
Q psy4717 29 GTRYWCITESTEDVEKVVQVAHDHNLVI-IPFGGGT 63 (90)
Q Consensus 29 ~p~~vv~P~s~~~v~~vv~~a~~~~i~v-~~~G~G~ 63 (90)
.|..|+...+.+++.++.+.|.+.|+|. .++-.|+
T Consensus 49 ~~kivlk~~~e~~l~~l~~~a~~~gl~~~~i~DAG~ 84 (115)
T 2zv3_A 49 QKKVVVKVNSEKELIDIYNKARSEGLPCSIIRDAGH 84 (115)
T ss_dssp CCEEEEEESSHHHHHHHHHHHHHHTCCEEEEEECC-
T ss_pred CeEEEEecCCHHHHHHHHHHHHHcCCCEEEEEeCCc
Confidence 3888999999999999999999999996 4555554
No 66
>1c7s_A Beta-N-acetylhexosaminidase; glycosyl hydrolase, chitinolysis, A/B(TIM)-barrel, site directed mutagenesis; HET: CBS; 1.80A {Serratia marcescens} SCOP: b.1.18.2 b.2.2.3 c.1.8.6 d.92.2.1 PDB: 1c7t_A* 1qba_A 1qbb_A*
Probab=65.63 E-value=4.8 Score=32.63 Aligned_cols=23 Identities=22% Similarity=0.351 Sum_probs=21.2
Q ss_pred CCHHHHHHHHHHHHhCCCcEEEE
Q psy4717 37 ESTEDVEKVVQVAHDHNLVIIPF 59 (90)
Q Consensus 37 ~s~~~v~~vv~~a~~~~i~v~~~ 59 (90)
=|.+|+++++++|++.+|.|+|-
T Consensus 397 YT~~direIv~YA~~rgI~VIPE 419 (858)
T 1c7s_A 397 FSRQDYIDIIKYAQARQIEVIPE 419 (858)
T ss_dssp BCHHHHHHHHHHHHTTTCEEEEE
T ss_pred CCHHHHHHHHHHHHHcCCEEEEc
Confidence 38899999999999999999985
No 67
>1umd_B E1-beta, 2-OXO acid dehydrogenase beta subunit; alpha(2)beta(2) tetramer, structural genomics; HET: TDP; 1.90A {Thermus thermophilus} SCOP: c.36.1.7 c.48.1.2 PDB: 1um9_B* 1umc_B* 1umb_B*
Probab=65.55 E-value=9.3 Score=26.78 Aligned_cols=30 Identities=7% Similarity=0.037 Sum_probs=27.2
Q ss_pred cc-EEEEcCCHHHHHHHHHHHHhCCCcEEEE
Q psy4717 30 TR-YWCITESTEDVEKVVQVAHDHNLVIIPF 59 (90)
Q Consensus 30 p~-~vv~P~s~~~v~~vv~~a~~~~i~v~~~ 59 (90)
|. .|+.|.+.+|...++++|-+++.|++.+
T Consensus 141 P~~~V~~P~d~~e~~~~l~~a~~~~~Pv~i~ 171 (324)
T 1umd_B 141 AGLKVVAVSTPYDAKGLLKAAIRDEDPVVFL 171 (324)
T ss_dssp TTCEEEECCSHHHHHHHHHHHHHCSSCEEEE
T ss_pred CCCEEEEeCCHHHHHHHHHHHHhcCCCEEEE
Confidence 54 7999999999999999999999999884
No 68
>4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii}
Probab=65.47 E-value=5.5 Score=28.93 Aligned_cols=61 Identities=10% Similarity=0.134 Sum_probs=38.0
Q ss_pred cchhHHHHHHHHhccCcccccee-eecCc-----------cEEEEcCCHHHHHHHHHHHHhCCCcEEEEcCCC
Q psy4717 3 STEDVEKVVQVAHDHNLVVNHQA-IFIGT-----------RYWCITESTEDVEKVVQVAHDHNLVIIPFGGGT 63 (90)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~p-----------~~vv~P~s~~~v~~vv~~a~~~~i~v~~~G~G~ 63 (90)
|.+.+..+++...+....+.... +...| .+.-.++=..+..++++.++++|+++++++||.
T Consensus 175 T~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~v~~~~~~gir~~p~~~eLi~~L~~~G~~v~IVSgg~ 247 (385)
T 4gxt_A 175 KTEEVYDLCKGAYASMKKERIRVEEFVSPDIKSEAGRISIKYFVGIRTLDEMVDLYRSLEENGIDCYIVSASF 247 (385)
T ss_dssp CHHHHHHHHHHHHHHHTTSCCEEEEEECCSSCCSSCCCEEEEEECCEECHHHHHHHHHHHHTTCEEEEEEEEE
T ss_pred CHHHHHHHHHHHHHhccccccCceeeecccccccCceeEEeeccCceeCHHHHHHHHHHHHCCCeEEEEcCCc
Confidence 56778888876655543322111 11111 111111224789999999999999999999985
No 69
>1rlk_A Hypothetical protein TA0108; structural genomics, conserved hypothetical protein, PSI, PR structure initiative; HET: SO4; 1.95A {Thermoplasma acidophilum} SCOP: c.131.1.1
Probab=65.33 E-value=9.1 Score=23.33 Aligned_cols=35 Identities=11% Similarity=0.170 Sum_probs=29.7
Q ss_pred CccEEEEcCCHHHHHHHHHHHHhCCCcE-EEEcCCC
Q psy4717 29 GTRYWCITESTEDVEKVVQVAHDHNLVI-IPFGGGT 63 (90)
Q Consensus 29 ~p~~vv~P~s~~~v~~vv~~a~~~~i~v-~~~G~G~ 63 (90)
.|..|+...+.+++.++.+.|.+.|+|. .++-.|+
T Consensus 51 ~~kiVlk~~~e~~l~~l~~~a~~~gl~~~~v~DAG~ 86 (117)
T 1rlk_A 51 QRKIVVKVNDLDEIMEIKRMADSMGIVNEIVQDRGY 86 (117)
T ss_dssp CCEEEEEESSHHHHHHHHHHHHHHTCCEEEEECCCS
T ss_pred CeEEEEecCCHHHHHHHHHHHHHCCCCEEEEEeCCc
Confidence 3889999999999999999999999996 4445554
No 70
>2ki0_A DS119; beta-alpha-beta, de novo protein; NMR {Synthetic}
Probab=65.04 E-value=2.9 Score=20.18 Aligned_cols=28 Identities=18% Similarity=0.342 Sum_probs=22.8
Q ss_pred EEEcCCHHHHHHHHHHHHhCCCcEEEEc
Q psy4717 33 WCITESTEDVEKVVQVAHDHNLVIIPFG 60 (90)
Q Consensus 33 vv~P~s~~~v~~vv~~a~~~~i~v~~~G 60 (90)
+..-.+.+++.++-+.|.+.++++..+|
T Consensus 8 iwvggtpeelkklkeeakkanirvtfwg 35 (36)
T 2ki0_A 8 IWVGGTPEELKKLKEEAKKANIRVTFWG 35 (36)
T ss_dssp CCBCCCHHHHHHHHHHHHHHCCCCCBCC
T ss_pred EEecCCHHHHHHHHHHHHhccEEEEeec
Confidence 3445688999999999999999887665
No 71
>1qs0_B 2-oxoisovalerate dehydrogenase beta-subunit; heterotetramer, THDP cofactor, oxidoreductase; HET: TDP; 2.40A {Pseudomonas putida} SCOP: c.36.1.7 c.48.1.2 PDB: 2bp7_B
Probab=64.67 E-value=7.9 Score=27.31 Aligned_cols=28 Identities=7% Similarity=0.006 Sum_probs=25.8
Q ss_pred cEEEEcCCHHHHHHHHHHHHhCCCcEEE
Q psy4717 31 RYWCITESTEDVEKVVQVAHDHNLVIIP 58 (90)
Q Consensus 31 ~~vv~P~s~~~v~~vv~~a~~~~i~v~~ 58 (90)
-.|+.|.+.+|...++++|-+.+.|+++
T Consensus 144 l~V~~Psd~~e~~~~l~~A~~~~~Pv~i 171 (338)
T 1qs0_B 144 LRTVMPSNPYDAKGLLIASIECDDPVIF 171 (338)
T ss_dssp CEEECCCSHHHHHHHHHHHHHSSSCEEE
T ss_pred CEEEeeCCHHHHHHHHHHHHhcCCcEEE
Confidence 4689999999999999999999899988
No 72
>1w85_B Pyruvate dehydrogenase E1 component, beta subunit; dehydrogenase, multienzyme complex, oxidoreductase; HET: TDP; 2.0A {Geobacillus stearothermophilus} SCOP: c.36.1.7 c.48.1.2 PDB: 1w88_B* 3dva_B* 3dv0_B* 3duf_B*
Probab=64.65 E-value=7.8 Score=27.21 Aligned_cols=30 Identities=17% Similarity=0.065 Sum_probs=27.2
Q ss_pred c-cEEEEcCCHHHHHHHHHHHHhCCCcEEEE
Q psy4717 30 T-RYWCITESTEDVEKVVQVAHDHNLVIIPF 59 (90)
Q Consensus 30 p-~~vv~P~s~~~v~~vv~~a~~~~i~v~~~ 59 (90)
| -.|+.|.+.+|...++++|-+++.|++++
T Consensus 140 P~l~V~~Psd~~e~~~~l~~a~~~~~Pv~i~ 170 (324)
T 1w85_B 140 PGLKVVIPSTPYDAKGLLISAIRDNDPVIFL 170 (324)
T ss_dssp TTCEEECCSSHHHHHHHHHHHHHSSSCEEEE
T ss_pred CCCEEEeeCCHHHHHHHHHHHHHcCCCEEEE
Confidence 6 47999999999999999999999998884
No 73
>1q7s_A BIT1, protein CGI-147; apoptosis; 2.00A {Homo sapiens} SCOP: c.131.1.1
Probab=64.61 E-value=14 Score=22.53 Aligned_cols=34 Identities=12% Similarity=0.114 Sum_probs=29.6
Q ss_pred ccEEEEcCCHHHHHHHHHHHHhCCCcE-EEEcCCC
Q psy4717 30 TRYWCITESTEDVEKVVQVAHDHNLVI-IPFGGGT 63 (90)
Q Consensus 30 p~~vv~P~s~~~v~~vv~~a~~~~i~v-~~~G~G~ 63 (90)
+..++...+.+++.++.+.|.+.|+|. .++-.|+
T Consensus 52 ~KVvlk~~~e~~l~~l~~~a~~~gl~~~~i~DAG~ 86 (117)
T 1q7s_A 52 PKVVVKAPDEETLIALLAHAKMLGLTVSLIQDAGR 86 (117)
T ss_dssp CEEEEEESSHHHHHHHHHHHHHTTCCEEEEEECSS
T ss_pred eeEEEEcCCHHHHHHHHHHHHHCCCCEEEEEECCC
Confidence 888999999999999999999999995 5555555
No 74
>1sfl_A 3-dehydroquinate dehydratase; 3-dehydroquinase, enzyme turnover, shikimate pathway, lyase; 1.90A {Staphylococcus aureus subsp} SCOP: c.1.10.1 PDB: 1sfj_A*
Probab=64.13 E-value=11 Score=25.56 Aligned_cols=35 Identities=9% Similarity=0.129 Sum_probs=29.9
Q ss_pred ccEEEEcCCHHHHHHHHHHHHh----CCCcEEEEcCCCC
Q psy4717 30 TRYWCITESTEDVEKVVQVAHD----HNLVIIPFGGGTN 64 (90)
Q Consensus 30 p~~vv~P~s~~~v~~vv~~a~~----~~i~v~~~G~G~n 64 (90)
+..++.|++.+|+..++++.++ .+.|++.++-|..
T Consensus 159 vKia~~a~~~~D~l~ll~~~~~~~~~~~~P~I~~~MG~~ 197 (238)
T 1sfl_A 159 VKLAVMPHNKNDVLNLLQAMSTFSDTMDCKVVGISMSKL 197 (238)
T ss_dssp EEEEECCSSHHHHHHHHHHHHHHHHHCSSEEEEEECTGG
T ss_pred EEEEecCCCHHHHHHHHHHHHHHhhcCCCCEEEEECCCC
Confidence 6888999999999999988765 4789999988763
No 75
>4gqr_A Pancreatic alpha-amylase; glycosyl hydrolase, diabetes, obesity, digestion, glycosidas inhibition, flavonol, drug design; HET: NAG MYC; 1.20A {Homo sapiens} PDB: 1cpu_A* 1bsi_A 1u2y_A* 1u30_A* 1u33_A* 1xcw_A* 1xcx_A* 1xd0_A* 1xd1_A* 2qmk_A* 2qv4_A* 3bai_A* 3baj_A* 3baw_A* 3ij7_A* 1hny_A* 3ij9_A* 3ij8_A* 4gqq_A* 1kgw_A* ...
Probab=63.29 E-value=6.3 Score=28.25 Aligned_cols=22 Identities=9% Similarity=0.203 Sum_probs=20.6
Q ss_pred CCHHHHHHHHHHHHhCCCcEEE
Q psy4717 37 ESTEDVEKVVQVAHDHNLVIIP 58 (90)
Q Consensus 37 ~s~~~v~~vv~~a~~~~i~v~~ 58 (90)
.|.+|++++|+.|++.||.|+.
T Consensus 74 Gt~~df~~lv~~aH~~Gi~Vil 95 (496)
T 4gqr_A 74 GNEDEFRNMVTRCNNVGVRIYV 95 (496)
T ss_dssp BCHHHHHHHHHHHHHTTCEEEE
T ss_pred CCHHHHHHHHHHHHHCCCEEEE
Confidence 6889999999999999999986
No 76
>4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A*
Probab=63.12 E-value=6.9 Score=27.82 Aligned_cols=61 Identities=3% Similarity=-0.108 Sum_probs=40.3
Q ss_pred cchhHHHHHHHHhccCccccceeeecC---ccEEEEcCCHHHHHHHHHHHHhCCCcEEEEcCCC
Q psy4717 3 STEDVEKVVQVAHDHNLVVNHQAIFIG---TRYWCITESTEDVEKVVQVAHDHNLVIIPFGGGT 63 (90)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---p~~vv~P~s~~~v~~vv~~a~~~~i~v~~~G~G~ 63 (90)
|.+.++.+++...+....+....+... ...++.|.--.+..++++..+++|+.+++.+++.
T Consensus 106 T~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~G~~v~ivSas~ 169 (327)
T 4as2_A 106 TLRELKGYVDELMAYGKPIPATYYDGDKLATLDVEPPRVFSGQRELYNKLMENGIEVYVISAAH 169 (327)
T ss_dssp BHHHHHHHHHHHHHHCSCEEEEEEETTEEEEEEECCCEECHHHHHHHHHHHHTTCEEEEEEEEE
T ss_pred CHHHHHHHHHHHHHhccccccccccccccccccccccccCHHHHHHHHHHHHCCCEEEEEeCCc
Confidence 667788888766655443222222111 1234445556788999999999999999998874
No 77
>4aie_A Glucan 1,6-alpha-glucosidase; hydrolase, glycoside hydrolase 13; HET: MES GOL; 2.05A {Lactobacillus acidophilus ncfm}
Probab=62.94 E-value=10 Score=27.81 Aligned_cols=22 Identities=18% Similarity=0.492 Sum_probs=20.4
Q ss_pred CCHHHHHHHHHHHHhCCCcEEE
Q psy4717 37 ESTEDVEKVVQVAHDHNLVIIP 58 (90)
Q Consensus 37 ~s~~~v~~vv~~a~~~~i~v~~ 58 (90)
.|.+|++++++.|++.||.|+.
T Consensus 77 Gt~~dfk~Lv~~aH~~Gi~Vil 98 (549)
T 4aie_A 77 GTMADMDELISKAKEHHIKIVM 98 (549)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEE
T ss_pred CCHHHHHHHHHHHHHCCCEEEE
Confidence 6899999999999999999875
No 78
>3okf_A 3-dehydroquinate synthase; structural genomics, center for structural genomics of infec diseases, csgid, NAD, lyase; HET: NAD; 2.50A {Vibrio cholerae o1 biovar eltor}
Probab=62.10 E-value=7.8 Score=28.43 Aligned_cols=28 Identities=32% Similarity=0.549 Sum_probs=24.8
Q ss_pred CHHHHHHHHHHHHhCCC----cEEEEcCCCCC
Q psy4717 38 STEDVEKVVQVAHDHNL----VIIPFGGGTNV 65 (90)
Q Consensus 38 s~~~v~~vv~~a~~~~i----~v~~~G~G~n~ 65 (90)
+.+.+.++++.+.+.++ -++.+|||+-.
T Consensus 105 t~~~v~~~~~~l~~~~~~R~d~IIAvGGGsv~ 136 (390)
T 3okf_A 105 TLETFNTVMSFLLEHNYSRDVVVIALGGGVIG 136 (390)
T ss_dssp BHHHHHHHHHHHHHTTCCTTCEEEEEESHHHH
T ss_pred hHHHHHHHHHHHHhcCCCcCcEEEEECCcHHh
Confidence 78999999999999988 59999999854
No 79
>2kng_A Protein LSR2; DNA-binding domain, immune response, DNA binding protein; NMR {Mycobacterium tuberculosis}
Probab=60.80 E-value=2 Score=23.31 Aligned_cols=26 Identities=12% Similarity=0.073 Sum_probs=20.4
Q ss_pred cCCHHHHHHHHHHHHhCCCcEEEEcC
Q psy4717 36 TESTEDVEKVVQVAHDHNLVIIPFGG 61 (90)
Q Consensus 36 P~s~~~v~~vv~~a~~~~i~v~~~G~ 61 (90)
|...++.++|-+||+++|++|-.+|.
T Consensus 9 ~~~~~~~~aIR~WAr~nG~~VsdRGR 34 (55)
T 2kng_A 9 AIDREQSAAIREWARRNGHNVSTRGR 34 (55)
T ss_dssp CCSSTHHHHHHHHHHHTTCCCCSSSC
T ss_pred CCCccChHHHHHHHHHcCCcCCCCCC
Confidence 33444788999999999999887763
No 80
>3ced_A Methionine import ATP-binding protein METN 2; ABC transporter, NIL domain, structur genomics, PSI-2, protein structure initiative; 2.15A {Staphylococcus aureus subsp} SCOP: d.58.18.13
Probab=60.68 E-value=18 Score=21.01 Aligned_cols=30 Identities=13% Similarity=0.031 Sum_probs=24.3
Q ss_pred cEEEEcC-CHHHHHHHHHHHHhCCCcEEEEc
Q psy4717 31 RYWCITE-STEDVEKVVQVAHDHNLVIIPFG 60 (90)
Q Consensus 31 ~~vv~P~-s~~~v~~vv~~a~~~~i~v~~~G 60 (90)
-.+-.+. +.+++.+++++.+++++.+-+.|
T Consensus 66 L~v~l~G~~~~~~~~ai~~L~~~~v~vEvlg 96 (98)
T 3ced_A 66 LVLHIPYISSVDFGKFEKELIERQVKMEVLR 96 (98)
T ss_dssp EEEEESCCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred EEEEEeCCCHHHHHHHHHHHHHCCCEEEEec
Confidence 3444577 78999999999999999887775
No 81
>1ik6_A Pyruvate dehydrogenase; E1BETA, tetramer, GXXXG, oxidoreductase; 2.00A {Pyrobaculum aerophilum} SCOP: c.36.1.7 c.48.1.2
Probab=60.54 E-value=10 Score=27.36 Aligned_cols=29 Identities=3% Similarity=0.033 Sum_probs=26.1
Q ss_pred cEEEEcCCHHHHHHHHHHHHhCCCcEEEE
Q psy4717 31 RYWCITESTEDVEKVVQVAHDHNLVIIPF 59 (90)
Q Consensus 31 ~~vv~P~s~~~v~~vv~~a~~~~i~v~~~ 59 (90)
-.|+.|.+.+|...++++|-+.+-|++++
T Consensus 190 l~V~~Psd~~e~~~ll~~A~~~~~Pv~i~ 218 (369)
T 1ik6_A 190 LVVVMPSTPYNAKGLLKAAIRGDDPVVFL 218 (369)
T ss_dssp CEEECCCSHHHHHHHHHHHHHSSSCEEEE
T ss_pred cEEEecCCHHHHHHHHHHHHhCCCCEEEE
Confidence 45899999999999999999988898884
No 82
>2z1k_A (NEO)pullulanase; hydrolase, structural genomics, NPPSFA, national project on structural and functional analyses; HET: GLC; 2.30A {Thermus thermophilus}
Probab=60.25 E-value=12 Score=27.17 Aligned_cols=22 Identities=27% Similarity=0.516 Sum_probs=20.2
Q ss_pred CCHHHHHHHHHHHHhCCCcEEE
Q psy4717 37 ESTEDVEKVVQVAHDHNLVIIP 58 (90)
Q Consensus 37 ~s~~~v~~vv~~a~~~~i~v~~ 58 (90)
.+.+|++++++.|+++|+.|+.
T Consensus 94 Gt~~df~~lv~~~h~~Gi~Vil 115 (475)
T 2z1k_A 94 GGNEALRHLLEVAHAHGVRVIL 115 (475)
T ss_dssp TCHHHHHHHHHHHHHTTCEEEE
T ss_pred CCHHHHHHHHHHHHHCCCEEEE
Confidence 5799999999999999999875
No 83
>3kbq_A Protein TA0487; structural genomics, CINA, protein structure initiative, MCS midwest center for structural genomics, unknown function; 2.00A {Thermoplasma acidophilum}
Probab=60.22 E-value=17 Score=23.65 Aligned_cols=35 Identities=17% Similarity=0.277 Sum_probs=28.7
Q ss_pred cEEEEcCCHHHHHHHHHHHHhCCCcEEEEcCCCCCC
Q psy4717 31 RYWCITESTEDVEKVVQVAHDHNLVIIPFGGGTNVT 66 (90)
Q Consensus 31 ~~vv~P~s~~~v~~vv~~a~~~~i~v~~~G~G~n~~ 66 (90)
...+.|.+.+++.+.++.+.+. .-+++..||++.+
T Consensus 41 ~~~iv~Dd~~~I~~~l~~a~~~-~DlVittGG~g~~ 75 (172)
T 3kbq_A 41 RGFVVMDDLDEIGWAFRVALEV-SDLVVSSGGLGPT 75 (172)
T ss_dssp EEEEECSCHHHHHHHHHHHHHH-CSEEEEESCCSSS
T ss_pred EEEEeCCCHHHHHHHHHHHHhc-CCEEEEcCCCcCC
Confidence 4567899999999999877653 6799999999885
No 84
>2bfd_B 2-oxoisovalerate dehydrogenase beta subunit; oxidoreductase, multi-enzyme complex, acylation, oxidative decarboxylation, maple syrup urine disease; HET: TDP; 1.39A {Homo sapiens} SCOP: c.36.1.7 c.48.1.2 PDB: 1dtw_B* 1olu_B* 1ols_B* 1v11_B* 1v16_B* 1v1m_B* 1u5b_B* 1wci_B* 1v1r_B* 1x7x_B* 1x7w_B* 1x7z_B* 1x80_B* 2beu_B* 2bev_B* 2bew_B* 2bfb_B* 2bfc_B* 1x7y_B* 2bfe_B* ...
Probab=60.12 E-value=10 Score=26.88 Aligned_cols=29 Identities=10% Similarity=-0.060 Sum_probs=26.6
Q ss_pred c-cEEEEcCCHHHHHHHHHHHHhCCCcEEE
Q psy4717 30 T-RYWCITESTEDVEKVVQVAHDHNLVIIP 58 (90)
Q Consensus 30 p-~~vv~P~s~~~v~~vv~~a~~~~i~v~~ 58 (90)
| -.|+.|.+.+|...++++|-+.+.|+++
T Consensus 158 P~l~V~~Psd~~e~~~~l~~a~~~~~Pv~i 187 (342)
T 2bfd_B 158 PGIKVVIPRSPFQAKGLLLSCIEDKNPCIF 187 (342)
T ss_dssp TTCEEECCSSHHHHHHHHHHHHHSSSCEEE
T ss_pred CCcEEEeeCCHHHHHHHHHHHHhcCCcEEE
Confidence 6 4799999999999999999998889888
No 85
>1wza_A Alpha-amylase A; hydrolase, halophilic, thermophilic; 1.60A {Halothermothrix orenii} SCOP: b.71.1.1 c.1.8.1
Probab=59.97 E-value=13 Score=27.30 Aligned_cols=22 Identities=32% Similarity=0.521 Sum_probs=20.1
Q ss_pred CCHHHHHHHHHHHHhCCCcEEE
Q psy4717 37 ESTEDVEKVVQVAHDHNLVIIP 58 (90)
Q Consensus 37 ~s~~~v~~vv~~a~~~~i~v~~ 58 (90)
.+.+|++++++.|++.||.|+.
T Consensus 79 Gt~~d~~~Lv~~aH~~Gi~Vil 100 (488)
T 1wza_A 79 GTLEDFHKLVEAAHQRGIKVII 100 (488)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEE
T ss_pred CCHHHHHHHHHHHHHCCCEEEE
Confidence 5899999999999999999875
No 86
>1xah_A Sadhqs, 3-dehydroquinate synthase; shikimate pathway, aromatic amino acid biosynthesis, open form, form B, domain movement, cyclase; HET: NAD; 2.20A {Staphylococcus aureus} PDB: 1xag_A* 1xai_A* 1xaj_A* 1xal_A*
Probab=59.70 E-value=6.4 Score=27.97 Aligned_cols=28 Identities=25% Similarity=0.488 Sum_probs=23.9
Q ss_pred CHHHHHHHHHHHHhCCC----cEEEEcCCCCC
Q psy4717 38 STEDVEKVVQVAHDHNL----VIIPFGGGTNV 65 (90)
Q Consensus 38 s~~~v~~vv~~a~~~~i----~v~~~G~G~n~ 65 (90)
+.+.+.++++.+.++++ -++.+|||+-+
T Consensus 72 ~~~~v~~~~~~~~~~~~~r~d~iIavGGGsv~ 103 (354)
T 1xah_A 72 TFEQYQETLEYILSHHVTRNTAIIAVGGGATG 103 (354)
T ss_dssp SHHHHHHHHHHHHTTCCCTTCEEEEEESHHHH
T ss_pred CHHHHHHHHHHHHHcCCCCCceEEEECChHHH
Confidence 78999999999999887 67889999854
No 87
>1zcz_A Bifunctional purine biosynthesis protein PURH; TM1249; HET: PG4; 1.88A {Thermotoga maritima} SCOP: c.24.1.3 c.97.1.4
Probab=59.07 E-value=10 Score=28.76 Aligned_cols=36 Identities=11% Similarity=0.092 Sum_probs=27.3
Q ss_pred cCccEEEEcCCHHHHHHHHHHHHhCCCcEEEEcCCC
Q psy4717 28 IGTRYWCITESTEDVEKVVQVAHDHNLVIIPFGGGT 63 (90)
Q Consensus 28 ~~p~~vv~P~s~~~v~~vv~~a~~~~i~v~~~G~G~ 63 (90)
.+..+|++|.----=.++++.|+++|+.++.-|--|
T Consensus 426 aGv~aIiQPGGSiRD~evI~aane~giaMvfTG~Rh 461 (464)
T 1zcz_A 426 AGVKAVVAPLGSIRDEEVIEKARELGITFYKAPSRV 461 (464)
T ss_dssp TTCCEEEECCCCTTHHHHHHHHHHHTCEEEECSSCC
T ss_pred hCCeEEEcCCCCcCcHHHHHHHHHcCCeEEEccccc
Confidence 347889999765544678889999999988866544
No 88
>3l9c_A 3-dehydroquinate dehydratase; AROD, amino-acid biosynthesis, aromatic amino acid biosynthe schiff base, lyase; 1.60A {Streptococcus mutans}
Probab=58.31 E-value=15 Score=25.33 Aligned_cols=34 Identities=9% Similarity=0.154 Sum_probs=29.2
Q ss_pred ccEEEEcCCHHHHHHHHHHHHh-----CCCcEEEEcCCC
Q psy4717 30 TRYWCITESTEDVEKVVQVAHD-----HNLVIIPFGGGT 63 (90)
Q Consensus 30 p~~vv~P~s~~~v~~vv~~a~~-----~~i~v~~~G~G~ 63 (90)
+..++.|++.+|+.+++++.++ .+.|++.++-|.
T Consensus 176 vKia~~a~s~~Dvl~Ll~~~~~~~~~~~~~PlIa~~MG~ 214 (259)
T 3l9c_A 176 VKIAVMPKNEQDVLDLMNYTRGFKTLNPNQEYVTMSMSK 214 (259)
T ss_dssp EEEEECCSSHHHHHHHHHHHHHHHHHCTTSEEEEEECTG
T ss_pred EEEEecCCCHHHHHHHHHHHHHHHhccCCCCEEEEECCC
Confidence 6788999999999999998865 368999988776
No 89
>2yr1_A 3-dehydroquinate dehydratase; amino acid biosynthesis, 3-dehydroquinase, structural genomi NPPSFA; 2.00A {Geobacillus kaustophilus}
Probab=58.17 E-value=11 Score=25.82 Aligned_cols=34 Identities=21% Similarity=0.324 Sum_probs=28.6
Q ss_pred ccEEEEcCCHHHHHHHHHHHHhC----CCcEEEEcCCC
Q psy4717 30 TRYWCITESTEDVEKVVQVAHDH----NLVIIPFGGGT 63 (90)
Q Consensus 30 p~~vv~P~s~~~v~~vv~~a~~~----~i~v~~~G~G~ 63 (90)
+..++.|++.+|+..++++.++. +.|++.++-|.
T Consensus 173 vKia~~a~s~~D~l~ll~~~~~~~~~~~~P~I~~~MG~ 210 (257)
T 2yr1_A 173 AKVAVMPKSPEDVLVLLQATEEARRELAIPLITMAMGG 210 (257)
T ss_dssp EEEEECCSSHHHHHHHHHHHHHHHHHCSSCEEEEECTT
T ss_pred EEEEeccCCHHHHHHHHHHHHHHhccCCCCEEEEECCC
Confidence 67889999999999999877553 68999998774
No 90
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=57.74 E-value=6.4 Score=26.77 Aligned_cols=28 Identities=21% Similarity=0.450 Sum_probs=23.2
Q ss_pred cCccEEEEcCCHHHHHHHHHHHHhCCC------cEEE
Q psy4717 28 IGTRYWCITESTEDVEKVVQVAHDHNL------VIIP 58 (90)
Q Consensus 28 ~~p~~vv~P~s~~~v~~vv~~a~~~~i------~v~~ 58 (90)
.++++++.|....+ ++++|+++++ |++|
T Consensus 84 AGA~fivsP~~~~e---vi~~~~~~~v~~~~~~~~~P 117 (217)
T 3lab_A 84 AGAQFIVSPGLTPE---LIEKAKQVKLDGQWQGVFLP 117 (217)
T ss_dssp HTCSEEEESSCCHH---HHHHHHHHHHHCSCCCEEEE
T ss_pred cCCCEEEeCCCcHH---HHHHHHHcCCCccCCCeEeC
Confidence 45899999997654 5788999999 9999
No 91
>3clh_A 3-dehydroquinate synthase; shikimate pathway, aromatic amino acid biosynthesis, DHQS, amino-acid biosynthesis, cytoplasm, lyase, NAD; HET: NAD; 2.40A {Helicobacter pylori}
Probab=57.74 E-value=7.6 Score=27.59 Aligned_cols=28 Identities=25% Similarity=0.549 Sum_probs=23.2
Q ss_pred CHHHHHHHHHHHHhCCC----cEEEEcCCCCC
Q psy4717 38 STEDVEKVVQVAHDHNL----VIIPFGGGTNV 65 (90)
Q Consensus 38 s~~~v~~vv~~a~~~~i----~v~~~G~G~n~ 65 (90)
+.+.+.++++.+.++++ -++.+|||+-+
T Consensus 67 ~~~~v~~~~~~~~~~~~~r~d~iIavGGGsv~ 98 (343)
T 3clh_A 67 NFHSLERILNNAFEMQLNRHSLMIALGGGVIS 98 (343)
T ss_dssp SHHHHHHHHHHHHHTTCCTTCEEEEEESHHHH
T ss_pred CHHHHHHHHHHHHhcCCCCCceEEEECChHHH
Confidence 67899999999999887 57779998753
No 92
>1rm6_B 4-hydroxybenzoyl-COA reductase beta subunit; xanthine oxidase family, dimer heterotrimers, oxidoreductase; HET: PCD FAD SF4 EPE; 1.60A {Thauera aromatica} SCOP: d.87.2.1 d.145.1.3 PDB: 1sb3_B*
Probab=57.01 E-value=6.1 Score=28.25 Aligned_cols=49 Identities=12% Similarity=0.155 Sum_probs=33.3
Q ss_pred EEEEcCCHHHHHHHHHHHHhCCCcEEEEcCCCCCCCCcccCCCCccceEEEEcCCC
Q psy4717 32 YWCITESTEDVEKVVQVAHDHNLVIIPFGGGTNVTGAVACPENELRTIISLDTSQM 87 (90)
Q Consensus 32 ~vv~P~s~~~v~~vv~~a~~~~i~v~~~G~G~n~~~~~~~~~~~~~~gvvIdl~~m 87 (90)
-++.|+|.+|+.++++ + -.-.+++|||++....- .+......+||++++
T Consensus 8 ~y~~P~sl~ea~~ll~---~--~~a~~lAGGT~l~~~~k--~~~~~p~~lIdi~~i 56 (324)
T 1rm6_B 8 RTHRPATLADAVNALA---A--EATLPLGAGTDLLPNLR--RGLGHPAALVDLTGI 56 (324)
T ss_dssp EEECCSSHHHHHHHTT---S--TTEEEESSCTTHHHHHH--TTSCCCSEEEECTTS
T ss_pred EEEccCCHHHHHHHHh---C--CCCEEEECchhHHHHHh--ccCCCCCEEEECCCC
Confidence 4789999999998886 2 24788899998732110 111113689999876
No 93
>3epo_A Thiamine biosynthesis protein THIC; alpha-beta barrel, SAM superfamily, biosynthetic protein; HET: MP5; 2.10A {Caulobacter crescentus} PDB: 3epm_A* 3epn_A*
Probab=55.77 E-value=15 Score=28.72 Aligned_cols=55 Identities=11% Similarity=0.208 Sum_probs=39.6
Q ss_pred hhHHHHHHHHhccCccccceeee----cCccEEEEcCCHHHHHHH------HHHHHhCCCcEEEEcCCCC
Q psy4717 5 EDVEKVVQVAHDHNLVVNHQAIF----IGTRYWCITESTEDVEKV------VQVAHDHNLVIIPFGGGTN 64 (90)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~----~~p~~vv~P~s~~~v~~v------v~~a~~~~i~v~~~G~G~n 64 (90)
+-||++-.-...++.. +. .+|-++.-..+..|++++ .+.|+++++++++=|-||-
T Consensus 354 e~FD~ileI~k~YDVt-----lSLGDglRPG~iaDA~D~AQ~~EL~~LGELtkrAwe~gVQVMIEGPGHV 418 (612)
T 3epo_A 354 ERFDEICEIMRAYDVS-----FSLGDGLRPGSTADANDEAQFSELRTLGELTKVAWKHGVQVMIEGPGHV 418 (612)
T ss_dssp HTHHHHHHHHTTTTCE-----EEECCTTCCSSGGGTTCHHHHHHHHHHHHHHHHHHHTTCCEEEECCCBC
T ss_pred HHHHHHHHHHHHhCeE-----EecccccCCCccccCCcHHHHHHHHHHHHHHHHHHHcCCcEEEECCCCC
Confidence 4466666655555433 22 338888888888887765 5778999999999999994
No 94
>3iwt_A 178AA long hypothetical molybdenum cofactor biosy protein B; biosynthesis, structural genomics, UNKN function, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii}
Probab=55.48 E-value=32 Score=21.73 Aligned_cols=37 Identities=19% Similarity=0.187 Sum_probs=29.9
Q ss_pred ccEEEEcCCHHHHHHHHHHHH-hCCCcEEEEcCCCCCC
Q psy4717 30 TRYWCITESTEDVEKVVQVAH-DHNLVIIPFGGGTNVT 66 (90)
Q Consensus 30 p~~vv~P~s~~~v~~vv~~a~-~~~i~v~~~G~G~n~~ 66 (90)
....+.|.+.+++.+.++.+. ..+.-+++..||.+.+
T Consensus 57 ~~~~iV~Dd~~~i~~al~~~~a~~~~DlVittGG~g~~ 94 (178)
T 3iwt_A 57 IGYSLVPDDKIKILKAFTDALSIDEVDVIISTGGTGYS 94 (178)
T ss_dssp EEEEEECSCHHHHHHHHHHHHTCTTCCEEEEESCCSSS
T ss_pred EEEEEeCCCHHHHHHHHHHHHhcCCCCEEEecCCcccC
Confidence 356788999999999887654 4567899999999875
No 95
>4h3d_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, aldolase class I; HET: PGE SHL; 1.95A {Clostridium difficile} PDB: 3js3_A*
Probab=55.31 E-value=15 Score=25.20 Aligned_cols=34 Identities=12% Similarity=0.214 Sum_probs=28.1
Q ss_pred ccEEEEcCCHHHHHHHHHHHHh-----CCCcEEEEcCCC
Q psy4717 30 TRYWCITESTEDVEKVVQVAHD-----HNLVIIPFGGGT 63 (90)
Q Consensus 30 p~~vv~P~s~~~v~~vv~~a~~-----~~i~v~~~G~G~ 63 (90)
+..++.|++.+|+.+++++.++ .+.|++.++-|.
T Consensus 173 vKia~~~~~~~D~l~Ll~~~~~~~~~~~~~P~I~~~MG~ 211 (258)
T 4h3d_A 173 PKIAVMPQNEKDVLVLLEATNEMFKIYADRPIITMSMSG 211 (258)
T ss_dssp EEEEECCSSHHHHHHHHHHHHHHHHHTCSSCBEEEECTG
T ss_pred EEEEEccCCHHHHHHHHHHHHHHHHhcCCCCEEEEeCCC
Confidence 6788999999999999987754 368998888764
No 96
>3l49_A ABC sugar (ribose) transporter, periplasmic substrate-binding subunit; sugar binding/transporter, structural genomics, PSI; HET: UNL; 2.30A {Rhodobacter sphaeroides}
Probab=54.96 E-value=25 Score=22.95 Aligned_cols=34 Identities=9% Similarity=0.043 Sum_probs=27.6
Q ss_pred ccEEE-EcCCHHHHHHHHHHHHhCCCcEEEEcCCC
Q psy4717 30 TRYWC-ITESTEDVEKVVQVAHDHNLVIIPFGGGT 63 (90)
Q Consensus 30 p~~vv-~P~s~~~v~~vv~~a~~~~i~v~~~G~G~ 63 (90)
++.++ .|.+.+.....++.+.+.++|++.++...
T Consensus 62 vdgiIi~~~~~~~~~~~~~~~~~~~iPvV~~~~~~ 96 (291)
T 3l49_A 62 PDAIIEQLGNLDVLNPWLQKINDAGIPLFTVDTAT 96 (291)
T ss_dssp CSEEEEESSCHHHHHHHHHHHHHTTCCEEEESCCC
T ss_pred CCEEEEeCCChhhhHHHHHHHHHCCCcEEEecCCC
Confidence 55555 68787888889999999999999997643
No 97
>3bmv_A Cyclomaltodextrin glucanotransferase; glycosidase, thermostable, family 13 glycosyl hydrolas; 1.60A {Thermoanaerobacterium thermosulfurigenorganism_taxid} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 3bmw_A* 1ciu_A 1a47_A 1pj9_A* 1cgt_A
Probab=54.73 E-value=15 Score=28.34 Aligned_cols=22 Identities=32% Similarity=0.539 Sum_probs=20.3
Q ss_pred CCHHHHHHHHHHHHhCCCcEEE
Q psy4717 37 ESTEDVEKVVQVAHDHNLVIIP 58 (90)
Q Consensus 37 ~s~~~v~~vv~~a~~~~i~v~~ 58 (90)
.+.+|++++++.|+++||.|+.
T Consensus 114 Gt~~dfk~Lv~~aH~~GikVil 135 (683)
T 3bmv_A 114 GSFTDFQNLINTAHAHNIKVII 135 (683)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEE
T ss_pred CCHHHHHHHHHHHHHCCCEEEE
Confidence 5799999999999999999876
No 98
>2j0p_A HEMS, hemin transport protein HEMS; conformational changes, HAEM, iron, trans ION transport, proteobacteria, iron transport; HET: HEM 12P; 1.7A {Yersinia enterocolitica} SCOP: e.62.1.1 PDB: 2j0r_A*
Probab=54.23 E-value=4.9 Score=29.25 Aligned_cols=61 Identities=11% Similarity=0.159 Sum_probs=40.2
Q ss_pred CCcchhHHHHHHHHhccCccccceeeecCccEEEEcCCHHHHHHHHHHHHhCCCcEEEEcCCCCC
Q psy4717 1 MKSTEDVEKVVQVAHDHNLVVNHQAIFIGTRYWCITESTEDVEKVVQVAHDHNLVIIPFGGGTNV 65 (90)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~vv~P~s~~~v~~vv~~a~~~~i~v~~~G~G~n~ 65 (90)
|+.|..+..+.. .|+-+.. ..++.-++-.+++-+.+.+..+++.+.+.++|++++=|..+.
T Consensus 192 m~D~hqF~~ll~-~~~vsR~---qa~r~~~~~~a~~v~~~al~~lL~~aa~~~~pIm~fVgN~Gc 252 (345)
T 2j0p_A 192 MTDVHEFFQLLK-RNNLTRQ---QAFRAVGNDLAYQVDNSSLTQLLNIAQQEQNEIMIFVGNRGC 252 (345)
T ss_dssp CSSGGGHHHHHH-HTTCCHH---HHHHHSCTTTEEEECTTHHHHHHHHHHHHCCCEEEEEECSSE
T ss_pred CcCHHHHHHHHH-HcCCCHH---HHHHhCCHhHeeecCHHHHHHHHHHHHhcCCcEEEEEcCCCE
Confidence 344555555544 3444332 335544544577777889999999999999998887665443
No 99
>1ht6_A AMY1, alpha-amylase isozyme 1; barley, beta-alpha-barrel, hydrolase; 1.50A {Hordeum vulgare} SCOP: b.71.1.1 c.1.8.1 PDB: 1p6w_A* 1rpk_A* 3bsg_A 2qpu_A* 1rp8_A* 1rp9_A* 2qps_A 3bsh_A* 1ava_A 1amy_A 1bg9_A*
Probab=54.00 E-value=13 Score=26.73 Aligned_cols=22 Identities=9% Similarity=0.308 Sum_probs=20.6
Q ss_pred CCHHHHHHHHHHHHhCCCcEEE
Q psy4717 37 ESTEDVEKVVQVAHDHNLVIIP 58 (90)
Q Consensus 37 ~s~~~v~~vv~~a~~~~i~v~~ 58 (90)
.+.+|++++++.|+++|+.|+.
T Consensus 66 Gt~~d~~~lv~~~h~~Gi~Vil 87 (405)
T 1ht6_A 66 GNAAELKSLIGALHGKGVQAIA 87 (405)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEE
T ss_pred CCHHHHHHHHHHHHHCCCEEEE
Confidence 6899999999999999999887
No 100
>1d3c_A Cyclodextrin glycosyltransferase; alpha-amylase, product complex, oligosaccharide, family 13 glycosyl hydrolase, transglycosylation; HET: GLC; 1.78A {Bacillus circulans} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1cxf_A* 1cxk_A* 1cdg_A* 1cxe_A* 1cxh_A* 1cxi_A* 2cxg_A* 1cgv_A* 2dij_A* 1cgy_A* 1kck_A* 1cgx_A* 1cxl_A* 1cgw_A* 1tcm_A 1kcl_A* 1eo5_A* 1eo7_A* 1dtu_A* 1ot1_A* ...
Probab=53.25 E-value=17 Score=28.14 Aligned_cols=22 Identities=23% Similarity=0.460 Sum_probs=20.3
Q ss_pred CCHHHHHHHHHHHHhCCCcEEE
Q psy4717 37 ESTEDVEKVVQVAHDHNLVIIP 58 (90)
Q Consensus 37 ~s~~~v~~vv~~a~~~~i~v~~ 58 (90)
.+.+|++++++.|+++||.|+.
T Consensus 113 Gt~~dfk~Lv~~aH~~GI~Vil 134 (686)
T 1d3c_A 113 GTIADFQNLIAAAHAKNIKVII 134 (686)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEE
T ss_pred CCHHHHHHHHHHHHHCCCEEEE
Confidence 5799999999999999999876
No 101
>1cyg_A Cyclodextrin glucanotransferase; glycosyltransferase; 2.50A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1
Probab=52.98 E-value=17 Score=28.06 Aligned_cols=22 Identities=23% Similarity=0.451 Sum_probs=20.4
Q ss_pred CCHHHHHHHHHHHHhCCCcEEE
Q psy4717 37 ESTEDVEKVVQVAHDHNLVIIP 58 (90)
Q Consensus 37 ~s~~~v~~vv~~a~~~~i~v~~ 58 (90)
.+.+|++++++.|+++||.|+.
T Consensus 109 Gt~~df~~Lv~~aH~~GIkVil 130 (680)
T 1cyg_A 109 GTLSDFQRLVDAAHAKGIKVII 130 (680)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEE
T ss_pred CCHHHHHHHHHHHHHCCCEEEE
Confidence 6899999999999999999876
No 102
>1qho_A Alpha-amylase; glycoside hydrolase, starch degradation; HET: MAL ABD; 1.70A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1qhp_A*
Probab=52.98 E-value=17 Score=28.10 Aligned_cols=22 Identities=18% Similarity=0.300 Sum_probs=20.4
Q ss_pred CCHHHHHHHHHHHHhCCCcEEE
Q psy4717 37 ESTEDVEKVVQVAHDHNLVIIP 58 (90)
Q Consensus 37 ~s~~~v~~vv~~a~~~~i~v~~ 58 (90)
.+.+|++++++.|+++||.|+.
T Consensus 105 Gt~~df~~Lv~~aH~~GikVil 126 (686)
T 1qho_A 105 GNWTTFDTLVNDAHQNGIKVIV 126 (686)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEE
T ss_pred CCHHHHHHHHHHHHHCCCEEEE
Confidence 5899999999999999999876
No 103
>2lbw_A H/ACA ribonucleoprotein complex subunit 2; L7AE, snoRNP, scaRNP, RNA binding protein; NMR {Saccharomyces cerevisiae} PDB: 2lbx_A
Probab=52.66 E-value=10 Score=23.10 Aligned_cols=32 Identities=13% Similarity=0.132 Sum_probs=27.0
Q ss_pred ccEEEEcCCHHH---HHHHHHHHHhCCCcEEEEcC
Q psy4717 30 TRYWCITESTED---VEKVVQVAHDHNLVIIPFGG 61 (90)
Q Consensus 30 p~~vv~P~s~~~---v~~vv~~a~~~~i~v~~~G~ 61 (90)
+..|+...+.++ +..+..+|.++++|++..++
T Consensus 37 akLViiA~D~~~~~~~~~l~~lc~~~~VP~~~v~s 71 (121)
T 2lbw_A 37 KGLVVIAGDIWPADVISHIPVLCEDHSVPYIFIPS 71 (121)
T ss_dssp CCEEEECTTCSCTTHHHHHHHHHHHTCCCEEECCC
T ss_pred ceEEEEeCCCCHHHHHHHHHHHHHhcCCcEEEECC
Confidence 888888888755 66788999999999988875
No 104
>3bh4_A Alpha-amylase; calcium, carbohydrate metabolism, glycosidase, hydrolase, metal-binding, secreted; 1.40A {Bacillus amyloliquefaciens} PDB: 1e43_A 1e3z_A* 1e40_A* 1e3x_A 1vjs_A 1ob0_A 1bli_A 1bpl_B 1bpl_A
Probab=52.66 E-value=13 Score=27.13 Aligned_cols=22 Identities=9% Similarity=0.300 Sum_probs=20.4
Q ss_pred CCHHHHHHHHHHHHhCCCcEEE
Q psy4717 37 ESTEDVEKVVQVAHDHNLVIIP 58 (90)
Q Consensus 37 ~s~~~v~~vv~~a~~~~i~v~~ 58 (90)
.+.+|++++++.|+++||.|+.
T Consensus 76 Gt~~df~~lv~~aH~~Gi~Vil 97 (483)
T 3bh4_A 76 GTKSELQDAIGSLHSRNVQVYG 97 (483)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEE
T ss_pred CCHHHHHHHHHHHHHCCCEEEE
Confidence 6899999999999999999876
No 105
>3bfj_A 1,3-propanediol oxidoreductase; opportunistic pathogens, decamer, structural genomics,struct proteomics in europe, spine; 2.70A {Klebsiella pneumoniae}
Probab=52.58 E-value=9.4 Score=27.36 Aligned_cols=29 Identities=21% Similarity=0.324 Sum_probs=24.1
Q ss_pred CCHHHHHHHHHHHHhCCCc-EEEEcCCCCC
Q psy4717 37 ESTEDVEKVVQVAHDHNLV-IIPFGGGTNV 65 (90)
Q Consensus 37 ~s~~~v~~vv~~a~~~~i~-v~~~G~G~n~ 65 (90)
.+.+.|.++++.++++++. ++.+|||+-+
T Consensus 76 p~~~~v~~~~~~~~~~~~d~IIavGGGsv~ 105 (387)
T 3bfj_A 76 PKDTNVRDGLAVFRREQCDIIVTVGGGSPH 105 (387)
T ss_dssp CBHHHHHHHHHHHHHTTCCEEEEEESHHHH
T ss_pred CCHHHHHHHHHHHHhcCCCEEEEeCCcchh
Confidence 3789999999999999986 4559999843
No 106
>3dhx_A Methionine import ATP-binding protein METN; methionine uptake, regulation, amino-acid transport, ATP-BIN hydrolase, inner membrane, membrane; 2.10A {Escherichia coli} SCOP: d.58.18.13
Probab=52.42 E-value=30 Score=20.28 Aligned_cols=31 Identities=10% Similarity=0.210 Sum_probs=25.9
Q ss_pred ccEEEEcCCHHHHHHHHHHHHhCCCcEEEEc
Q psy4717 30 TRYWCITESTEDVEKVVQVAHDHNLVIIPFG 60 (90)
Q Consensus 30 p~~vv~P~s~~~v~~vv~~a~~~~i~v~~~G 60 (90)
--.+-.+.+.+++.+++++.++.++.+-+.|
T Consensus 66 ~L~v~l~G~~~~~~~ai~~L~~~~v~vEvl~ 96 (106)
T 3dhx_A 66 IMLTEMHGTQQDTQAAIAWLQEHHVKVEVLG 96 (106)
T ss_dssp EEEEEEESCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred EEEEEEeCCHHHHHHHHHHHHHCCCEEEEee
Confidence 4456678889999999999999999887764
No 107
>1ud2_A Amylase, alpha-amylase; calcium-free, alkaline, hydrolase; 2.13A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1ud4_A 1ud5_A 1ud6_A 1ud8_A 1ud3_A
Probab=52.38 E-value=14 Score=27.07 Aligned_cols=22 Identities=5% Similarity=0.240 Sum_probs=20.3
Q ss_pred CCHHHHHHHHHHHHhCCCcEEE
Q psy4717 37 ESTEDVEKVVQVAHDHNLVIIP 58 (90)
Q Consensus 37 ~s~~~v~~vv~~a~~~~i~v~~ 58 (90)
.+.+|++++++.|+++||.|+.
T Consensus 78 Gt~~df~~lv~~aH~~Gi~Vil 99 (480)
T 1ud2_A 78 GTKAQLERAIGSLKSNDINVYG 99 (480)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEE
T ss_pred CCHHHHHHHHHHHHHCCCEEEE
Confidence 6799999999999999999875
No 108
>2guy_A Alpha-amylase A; (beta-alpha) 8 barrel, hydrolase; HET: NAG BMA; 1.59A {Aspergillus oryzae} SCOP: b.71.1.1 c.1.8.1 PDB: 2gvy_A* 3kwx_A* 6taa_A 7taa_A* 2taa_A
Probab=52.28 E-value=14 Score=26.99 Aligned_cols=22 Identities=9% Similarity=0.397 Sum_probs=20.2
Q ss_pred CCHHHHHHHHHHHHhCCCcEEE
Q psy4717 37 ESTEDVEKVVQVAHDHNLVIIP 58 (90)
Q Consensus 37 ~s~~~v~~vv~~a~~~~i~v~~ 58 (90)
.+.+|++++++.|+++|+.|+.
T Consensus 95 Gt~~df~~lv~~~H~~Gi~Vil 116 (478)
T 2guy_A 95 GTADDLKALSSALHERGMYLMV 116 (478)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEE
T ss_pred CCHHHHHHHHHHHHHCCCEEEE
Confidence 5789999999999999999876
No 109
>2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032}
Probab=52.00 E-value=19 Score=20.52 Aligned_cols=26 Identities=4% Similarity=0.077 Sum_probs=22.0
Q ss_pred HHHHHHHHHHHhCCCcEEEEcCCCCC
Q psy4717 40 EDVEKVVQVAHDHNLVIIPFGGGTNV 65 (90)
Q Consensus 40 ~~v~~vv~~a~~~~i~v~~~G~G~n~ 65 (90)
..+.++++.+++.|+++.+.+++...
T Consensus 21 ~~~~~~l~~L~~~G~~~~i~S~~~~~ 46 (137)
T 2pr7_A 21 RRWRNLLAAAKKNGVGTVILSNDPGG 46 (137)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECSCCG
T ss_pred ccHHHHHHHHHHCCCEEEEEeCCCHH
Confidence 56888999999999999999887644
No 110
>3rfa_A Ribosomal RNA large subunit methyltransferase N; radical SAM, S-adenosylmethionine, iron sulfur cluster, oxidoreductase; HET: SAM; 2.05A {Escherichia coli} PDB: 3rf9_A*
Probab=51.89 E-value=22 Score=26.16 Aligned_cols=64 Identities=13% Similarity=0.070 Sum_probs=40.0
Q ss_pred cchhHHHHHHHHhccCccccceeeecCccEEEEcCCHHHHHHHHHHHHhCCCcEEEEcC-CCCCC
Q psy4717 3 STEDVEKVVQVAHDHNLVVNHQAIFIGTRYWCITESTEDVEKVVQVAHDHNLVIIPFGG-GTNVT 66 (90)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~vv~P~s~~~v~~vv~~a~~~~i~v~~~G~-G~n~~ 66 (90)
+-++++++++...+.+...+---|...+..-+.|.+.+++.++.+++.++|+.+.++-. |..+.
T Consensus 288 s~e~~~~La~ll~~l~~~VnLIpynP~~~~~~~~ps~e~i~~f~~iL~~~Gi~vtiR~~~G~di~ 352 (404)
T 3rfa_A 288 GTEHAHQLAELLKDTPCKINLIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDID 352 (404)
T ss_dssp SHHHHHHHHHHTTTSCEEEEEEECCCCTTCCCCBCCHHHHHHHHHHHHHTTCEEEECCCCCC---
T ss_pred CHHHHHHHHHHHHcCCCcEEEEeccCCCCCCCCCCCHHHHHHHHHHHHHcCCcEEEcCCCCcccc
Confidence 34578888886665432111111222234446788999999999999999999888743 66554
No 111
>1lwj_A 4-alpha-glucanotransferase; alpha-amylase family, acarbose, (beta/alpha)8 barrel; HET: ACG; 2.50A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1lwh_A*
Probab=51.75 E-value=14 Score=26.63 Aligned_cols=22 Identities=14% Similarity=0.410 Sum_probs=20.2
Q ss_pred CCHHHHHHHHHHHHhCCCcEEE
Q psy4717 37 ESTEDVEKVVQVAHDHNLVIIP 58 (90)
Q Consensus 37 ~s~~~v~~vv~~a~~~~i~v~~ 58 (90)
.+.+|++++++.|+++|+.|+.
T Consensus 67 Gt~~df~~lv~~aH~~Gi~Vil 88 (441)
T 1lwj_A 67 GSEREFKEMIEAFHDSGIKVVL 88 (441)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEE
T ss_pred CCHHHHHHHHHHHHHCCCEEEE
Confidence 5899999999999999999875
No 112
>1uok_A Oligo-1,6-glucosidase; sugar degradation, hydrolase, TIM-barrel glycosidase; 2.00A {Bacillus cereus} SCOP: b.71.1.1 c.1.8.1
Probab=51.74 E-value=21 Score=26.74 Aligned_cols=22 Identities=18% Similarity=0.440 Sum_probs=20.2
Q ss_pred CCHHHHHHHHHHHHhCCCcEEE
Q psy4717 37 ESTEDVEKVVQVAHDHNLVIIP 58 (90)
Q Consensus 37 ~s~~~v~~vv~~a~~~~i~v~~ 58 (90)
.+.+|++++++.|++.|+.|+.
T Consensus 76 Gt~~df~~lv~~~h~~Gi~Vil 97 (558)
T 1uok_A 76 GTMEDWDELLHEMHERNMKLMM 97 (558)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEE
T ss_pred CCHHHHHHHHHHHHHCCCEEEE
Confidence 6899999999999999999874
No 113
>1wpc_A Glucan 1,4-alpha-maltohexaosidase; maltohexaose-producing amylase, alpha-amylase, acarbose, HYD; HET: ACI GLC GAL; 1.90A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1wp6_A* 2d3l_A* 2d3n_A* 2die_A 2gjp_A* 2gjr_A 1w9x_A*
Probab=51.72 E-value=14 Score=27.02 Aligned_cols=22 Identities=5% Similarity=0.191 Sum_probs=20.3
Q ss_pred CCHHHHHHHHHHHHhCCCcEEE
Q psy4717 37 ESTEDVEKVVQVAHDHNLVIIP 58 (90)
Q Consensus 37 ~s~~~v~~vv~~a~~~~i~v~~ 58 (90)
.+.+|++++++.|+++||.|+.
T Consensus 80 Gt~~df~~Lv~~aH~~Gi~Vil 101 (485)
T 1wpc_A 80 GTRSQLQAAVTSLKNNGIQVYG 101 (485)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEE
T ss_pred CCHHHHHHHHHHHHHCCCEEEE
Confidence 6799999999999999999876
No 114
>1mxg_A Alpha amylase; hyperthermostable, family 13 glycosyl hydrola (beta/alpha)8-barrel, hydrolase; HET: ACR ETE; 1.60A {Pyrococcus woesei} SCOP: b.71.1.1 c.1.8.1 PDB: 1mwo_A* 1mxd_A* 3qgv_A*
Probab=51.71 E-value=14 Score=26.80 Aligned_cols=22 Identities=27% Similarity=0.498 Sum_probs=20.3
Q ss_pred CCHHHHHHHHHHHHhCCCcEEE
Q psy4717 37 ESTEDVEKVVQVAHDHNLVIIP 58 (90)
Q Consensus 37 ~s~~~v~~vv~~a~~~~i~v~~ 58 (90)
.+.+|++++++.|+++|+.|+.
T Consensus 84 Gt~~df~~lv~~~H~~Gi~Vil 105 (435)
T 1mxg_A 84 GSKEELVRLIQTAHAYGIKVIA 105 (435)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEE
T ss_pred CCHHHHHHHHHHHHHCCCEEEE
Confidence 4899999999999999999876
No 115
>1g94_A Alpha-amylase; beta-alpha-8-barrel, 3 domain structure, hydrolase; HET: DAF GLC; 1.74A {Pseudoalteromonas haloplanktis} SCOP: b.71.1.1 c.1.8.1 PDB: 1g9h_A* 1l0p_A 1aqm_A* 1aqh_A* 1b0i_A 1jd7_A 1jd9_A 1kxh_A*
Probab=51.68 E-value=13 Score=27.04 Aligned_cols=22 Identities=9% Similarity=0.039 Sum_probs=20.4
Q ss_pred CCHHHHHHHHHHHHhCCCcEEE
Q psy4717 37 ESTEDVEKVVQVAHDHNLVIIP 58 (90)
Q Consensus 37 ~s~~~v~~vv~~a~~~~i~v~~ 58 (90)
.+.+|++++++.|+++||.|+.
T Consensus 62 Gt~~dfk~Lv~~aH~~Gi~Vil 83 (448)
T 1g94_A 62 GNRAQFIDMVNRCSAAGVDIYV 83 (448)
T ss_dssp BCHHHHHHHHHHHHHTTCEEEE
T ss_pred CCHHHHHHHHHHHHHCCCEEEE
Confidence 6899999999999999999875
No 116
>1vlj_A NADH-dependent butanol dehydrogenase; TM0820, structural G JCSG, protein structure initiative, PSI, joint center for S genomics; HET: NAP; 1.78A {Thermotoga maritima} SCOP: e.22.1.2
Probab=51.09 E-value=10 Score=27.50 Aligned_cols=28 Identities=29% Similarity=0.519 Sum_probs=23.7
Q ss_pred CHHHHHHHHHHHHhCCCc-EEEEcCCCCC
Q psy4717 38 STEDVEKVVQVAHDHNLV-IIPFGGGTNV 65 (90)
Q Consensus 38 s~~~v~~vv~~a~~~~i~-v~~~G~G~n~ 65 (90)
+.+.|.++++.++++++. ++.+|||+-+
T Consensus 86 ~~~~v~~~~~~~~~~~~D~IIavGGGsvi 114 (407)
T 1vlj_A 86 VLSKVHEAVEVAKKEKVEAVLGVGGGSVV 114 (407)
T ss_dssp BHHHHHHHHHHHHHTTCSEEEEEESHHHH
T ss_pred CHHHHHHHHHHHHhcCCCEEEEeCChhHH
Confidence 789999999999999986 5559999843
No 117
>8abp_A L-arabinose-binding protein; binding proteins; HET: GLA GAL; 1.49A {Escherichia coli} SCOP: c.93.1.1 PDB: 7abp_A* 6abp_A* 1abe_A* 1abf_A* 5abp_A* 1bap_A* 1apb_A* 9abp_A* 2wrz_A
Probab=51.05 E-value=16 Score=24.07 Aligned_cols=33 Identities=12% Similarity=0.066 Sum_probs=26.1
Q ss_pred ccE-EEEcCCHHHHHHHHHHHHhCCCcEEEEcCC
Q psy4717 30 TRY-WCITESTEDVEKVVQVAHDHNLVIIPFGGG 62 (90)
Q Consensus 30 p~~-vv~P~s~~~v~~vv~~a~~~~i~v~~~G~G 62 (90)
++. ++.|.+.+.....++.+.+.++|++.++..
T Consensus 58 vdgiii~~~~~~~~~~~~~~~~~~~iPvV~~~~~ 91 (306)
T 8abp_A 58 AKGFVICTPDPKLGSAIVAKARGYDMKVIAVDDQ 91 (306)
T ss_dssp CCEEEEECSCGGGHHHHHHHHHHTTCEEEEESSC
T ss_pred CCEEEEeCCCchhhHHHHHHHHHCCCcEEEeCCC
Confidence 444 566777777788899999999999999853
No 118
>3dhu_A Alpha-amylase; structural genomics, hydrolase, glycosidase, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum}
Probab=50.39 E-value=15 Score=26.47 Aligned_cols=22 Identities=14% Similarity=0.300 Sum_probs=20.5
Q ss_pred CCHHHHHHHHHHHHhCCCcEEE
Q psy4717 37 ESTEDVEKVVQVAHDHNLVIIP 58 (90)
Q Consensus 37 ~s~~~v~~vv~~a~~~~i~v~~ 58 (90)
.+.+|++++++.|++.|+.++.
T Consensus 81 Gt~~~~~~lv~~~h~~Gi~vi~ 102 (449)
T 3dhu_A 81 GTLADFKALTDRAHELGMKVML 102 (449)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEE
T ss_pred CCHHHHHHHHHHHHHCCCEEEE
Confidence 6889999999999999999887
No 119
>2ze0_A Alpha-glucosidase; TIM barrel, glucoside hydrolase, extremophIle, hydrolase; 2.00A {Geobacillus SP}
Probab=50.23 E-value=23 Score=26.52 Aligned_cols=22 Identities=23% Similarity=0.450 Sum_probs=20.0
Q ss_pred CCHHHHHHHHHHHHhCCCcEEE
Q psy4717 37 ESTEDVEKVVQVAHDHNLVIIP 58 (90)
Q Consensus 37 ~s~~~v~~vv~~a~~~~i~v~~ 58 (90)
.+.+|++++++.|+++||.|+.
T Consensus 76 Gt~~d~~~lv~~~h~~Gi~vil 97 (555)
T 2ze0_A 76 GTMDDFDELLAQAHRRGLKVIL 97 (555)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEE
T ss_pred CCHHHHHHHHHHHHHCCCEEEE
Confidence 5899999999999999999873
No 120
>1hvx_A Alpha-amylase; hydrolase, glycosyltransferase, thermostability; 2.00A {Geobacillus stearothermophilus} SCOP: b.71.1.1 c.1.8.1
Probab=50.20 E-value=15 Score=27.23 Aligned_cols=22 Identities=14% Similarity=0.259 Sum_probs=20.4
Q ss_pred CCHHHHHHHHHHHHhCCCcEEE
Q psy4717 37 ESTEDVEKVVQVAHDHNLVIIP 58 (90)
Q Consensus 37 ~s~~~v~~vv~~a~~~~i~v~~ 58 (90)
.+.+|++++++.|+++||.|+.
T Consensus 79 Gt~~dfk~Lv~~aH~~Gi~Vil 100 (515)
T 1hvx_A 79 GTKAQYLQAIQAAHAAGMQVYA 100 (515)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEE
T ss_pred CCHHHHHHHHHHHHHCCCEEEE
Confidence 6899999999999999999875
No 121
>3edf_A FSPCMD, cyclomaltodextrinase; alpha-cyclodextrin complex, glycosidase, hydrolase; HET: CE6 ACX; 1.65A {Flavobacterium SP} PDB: 3edj_A* 3edk_A* 3ede_A 3edd_A* 1h3g_A
Probab=49.63 E-value=23 Score=26.90 Aligned_cols=22 Identities=23% Similarity=0.314 Sum_probs=20.6
Q ss_pred CCHHHHHHHHHHHHhCCCcEEE
Q psy4717 37 ESTEDVEKVVQVAHDHNLVIIP 58 (90)
Q Consensus 37 ~s~~~v~~vv~~a~~~~i~v~~ 58 (90)
.+.+|++++++.|+++||.|+.
T Consensus 196 Gt~~df~~Lv~~aH~~Gi~Vil 217 (601)
T 3edf_A 196 GSNEDFVRLSTEARKRGMGLIQ 217 (601)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEE
T ss_pred CCHHHHHHHHHHHHHcCCEEEE
Confidence 6889999999999999999986
No 122
>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*
Probab=48.77 E-value=14 Score=27.74 Aligned_cols=34 Identities=12% Similarity=0.169 Sum_probs=30.5
Q ss_pred ccEEEEcCCHHHHHHHHHHHHhCCCcEEEEcCCC
Q psy4717 30 TRYWCITESTEDVEKVVQVAHDHNLVIIPFGGGT 63 (90)
Q Consensus 30 p~~vv~P~s~~~v~~vv~~a~~~~i~v~~~G~G~ 63 (90)
.+.++.|++.+|+.+++++.++.+.|++.++-|.
T Consensus 151 vKia~~a~~~~D~~~l~~~~~~~~~p~i~~~MG~ 184 (523)
T 2o7s_A 151 VKIATTAVDIADVARMFHITSKAQVPTIGLVMGE 184 (523)
T ss_dssp EEEEEECSSGGGHHHHHHHHHHCSSCEEEEEESG
T ss_pred EEEEecCCCHHHHHHHHHHHhhcCCCEEEEEcCC
Confidence 5788999999999999999999999998887765
No 123
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=48.69 E-value=13 Score=25.34 Aligned_cols=28 Identities=14% Similarity=0.332 Sum_probs=22.3
Q ss_pred cCccEEEEcCCHHHHHHHHHHHHhCCCcEEE
Q psy4717 28 IGTRYWCITESTEDVEKVVQVAHDHNLVIIP 58 (90)
Q Consensus 28 ~~p~~vv~P~s~~~v~~vv~~a~~~~i~v~~ 58 (90)
.++++++.|....+ ++++|++++++++|
T Consensus 105 AGA~fIvsP~~~~~---vi~~~~~~gi~~ip 132 (232)
T 4e38_A 105 AGATFVVSPGFNPN---TVRACQEIGIDIVP 132 (232)
T ss_dssp HTCSEEECSSCCHH---HHHHHHHHTCEEEC
T ss_pred cCCCEEEeCCCCHH---HHHHHHHcCCCEEc
Confidence 34899999986554 56778899999998
No 124
>3zzm_A Bifunctional purine biosynthesis protein PURH; transferase, hydrolase; HET: JLN; 2.20A {Mycobacterium tuberculosis} PDB: 4a1o_A*
Probab=48.58 E-value=19 Score=27.71 Aligned_cols=35 Identities=14% Similarity=0.120 Sum_probs=26.1
Q ss_pred CccEEEEcCCHHHHHHHHHHHHhCCCcEEEEcCCC
Q psy4717 29 GTRYWCITESTEDVEKVVQVAHDHNLVIIPFGGGT 63 (90)
Q Consensus 29 ~p~~vv~P~s~~~v~~vv~~a~~~~i~v~~~G~G~ 63 (90)
+..+|++|.----=.++++.|+++|+.++.-|--|
T Consensus 486 Gv~aIiQPGGSiRD~evI~aane~giaMvfTG~Rh 520 (523)
T 3zzm_A 486 GVTAVVHPGGSVRDEEVTEAAAKAGVTLYLTGARH 520 (523)
T ss_dssp TCCEEEECCCCTTHHHHHHHHHHHTCEEEECSCCC
T ss_pred CCEEEECCCCCCCcHHHHHHHHHcCCeEEEcCccC
Confidence 47789999765222388999999999988866544
No 125
>3lws_A Aromatic amino acid beta-eliminating lyase/threonine aldolase; structural genomics, joint center for structural genomics, JCSG; HET: LLP MSE; 2.00A {Exiguobacterium sibiricum}
Probab=48.46 E-value=17 Score=24.61 Aligned_cols=22 Identities=5% Similarity=0.141 Sum_probs=19.0
Q ss_pred CHHHHHHHHHHHHhCCCcEEEE
Q psy4717 38 STEDVEKVVQVAHDHNLVIIPF 59 (90)
Q Consensus 38 s~~~v~~vv~~a~~~~i~v~~~ 59 (90)
+.+++.+++++|+++++.++.=
T Consensus 154 ~~~~l~~i~~~~~~~~~~li~D 175 (357)
T 3lws_A 154 AFSELETISRYCRERGIRLHLD 175 (357)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEE
T ss_pred CHHHHHHHHHHHHHcCCEEEEE
Confidence 3689999999999999988763
No 126
>2aaa_A Alpha-amylase; glycosidase; 2.10A {Aspergillus niger} SCOP: b.71.1.1 c.1.8.1
Probab=48.43 E-value=16 Score=26.67 Aligned_cols=22 Identities=5% Similarity=0.332 Sum_probs=20.1
Q ss_pred CCHHHHHHHHHHHHhCCCcEEE
Q psy4717 37 ESTEDVEKVVQVAHDHNLVIIP 58 (90)
Q Consensus 37 ~s~~~v~~vv~~a~~~~i~v~~ 58 (90)
.+.+|++++++.|+++||.|+.
T Consensus 95 Gt~~df~~lv~~~H~~Gi~Vil 116 (484)
T 2aaa_A 95 GTADNLKSLSDALHARGMYLMV 116 (484)
T ss_dssp CCHHHHHHHHHHHHTTTCEEEE
T ss_pred CCHHHHHHHHHHHHHCCCEEEE
Confidence 4789999999999999999876
No 127
>3d02_A Putative LACI-type transcriptional regulator; periplasmic sugar-binding protein, structura genomics; HET: MSE GOL; 1.30A {Klebsiella pneumoniae subsp}
Probab=48.26 E-value=30 Score=22.70 Aligned_cols=34 Identities=15% Similarity=0.190 Sum_probs=26.4
Q ss_pred CccEE-EEcCCHHHHHHHHHHHHhCCCcEEEEcCC
Q psy4717 29 GTRYW-CITESTEDVEKVVQVAHDHNLVIIPFGGG 62 (90)
Q Consensus 29 ~p~~v-v~P~s~~~v~~vv~~a~~~~i~v~~~G~G 62 (90)
+++.+ +.|.+.+....+++.+.+.++|++.++..
T Consensus 61 ~vdgiii~~~~~~~~~~~~~~~~~~~ipvV~~~~~ 95 (303)
T 3d02_A 61 KVDAITIVPNDANVLEPVFKKARDAGIVVLTNESP 95 (303)
T ss_dssp TCSEEEECCSCHHHHHHHHHHHHHTTCEEEEESCT
T ss_pred CCCEEEEecCChHHHHHHHHHHHHCCCeEEEEecC
Confidence 36665 45777777778889999999999998754
No 128
>1rrm_A Lactaldehyde reductase; structural genomics, dehydrogenase, PSI, protein structure initiative; HET: APR; 1.60A {Escherichia coli} SCOP: e.22.1.2 PDB: 2bi4_A* 2bl4_A*
Probab=47.87 E-value=9.1 Score=27.39 Aligned_cols=29 Identities=21% Similarity=0.327 Sum_probs=24.0
Q ss_pred CCHHHHHHHHHHHHhCCCc-EEEEcCCCCC
Q psy4717 37 ESTEDVEKVVQVAHDHNLV-IIPFGGGTNV 65 (90)
Q Consensus 37 ~s~~~v~~vv~~a~~~~i~-v~~~G~G~n~ 65 (90)
.+.+.|.++++.++++++. ++.+|||+-+
T Consensus 72 p~~~~v~~~~~~~~~~~~d~IIavGGGsv~ 101 (386)
T 1rrm_A 72 PTITVVKEGLGVFQNSGADYLIAIGGGSPQ 101 (386)
T ss_dssp CBHHHHHHHHHHHHHHTCSEEEEEESHHHH
T ss_pred CCHHHHHHHHHHHHhcCcCEEEEeCChHHH
Confidence 3889999999999998885 5559999843
No 129
>3qz6_A HPCH/HPAI aldolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 2.00A {Desulfitobacterium hafniense} SCOP: c.1.12.0
Probab=47.79 E-value=57 Score=22.20 Aligned_cols=22 Identities=27% Similarity=0.439 Sum_probs=19.2
Q ss_pred CccEEEEcC--CHHHHHHHHHHHH
Q psy4717 29 GTRYWCITE--STEDVEKVVQVAH 50 (90)
Q Consensus 29 ~p~~vv~P~--s~~~v~~vv~~a~ 50 (90)
+++.|+.|. |.+|++++++.++
T Consensus 88 G~~gI~lP~v~saed~~~~~~~~~ 111 (261)
T 3qz6_A 88 GAEGFMIPGVQSAETMRETVRLAK 111 (261)
T ss_dssp TCCEEEETTCCSHHHHHHHHHHHS
T ss_pred CCCEEEECCcCCHHHHHHHHHHhc
Confidence 488899996 7999999999985
No 130
>4ehi_A Bifunctional purine biosynthesis protein PURH; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE BTB; 2.28A {Campylobacter jejuni subsp}
Probab=47.68 E-value=20 Score=27.66 Aligned_cols=35 Identities=14% Similarity=0.144 Sum_probs=25.4
Q ss_pred CccEEEEcCCHHHHHHHHHHHHhCCCcEEEEcCCC
Q psy4717 29 GTRYWCITESTEDVEKVVQVAHDHNLVIIPFGGGT 63 (90)
Q Consensus 29 ~p~~vv~P~s~~~v~~vv~~a~~~~i~v~~~G~G~ 63 (90)
+..+|++|.----=.++++.|+++|+.++.-|--|
T Consensus 497 GV~aIiQPGGSiRD~evI~aane~giaMvfTG~Rh 531 (534)
T 4ehi_A 497 GVKAIVEPGGSIRDDEVVKAADEYGMALYFTGVRH 531 (534)
T ss_dssp TCCEEEECCCCTTHHHHHHHHHHHTCEEEECSCCC
T ss_pred CCEEEECCCCCCccHHHHHHHHHcCCeEEEcCccC
Confidence 46788888765333566888999999888866544
No 131
>3l6u_A ABC-type sugar transport system periplasmic compo; structural genomics, nysgrc, target 11006S, PSI-2, protein S initiative; 1.90A {Exiguobacterium sibiricum}
Probab=47.36 E-value=15 Score=24.13 Aligned_cols=34 Identities=6% Similarity=0.049 Sum_probs=26.2
Q ss_pred ccE-EEEcCCHHHHHHHHHHHHhCCCcEEEEcCCC
Q psy4717 30 TRY-WCITESTEDVEKVVQVAHDHNLVIIPFGGGT 63 (90)
Q Consensus 30 p~~-vv~P~s~~~v~~vv~~a~~~~i~v~~~G~G~ 63 (90)
++. ++.|.+.+.+...++.+.+.++|++.++...
T Consensus 65 vdgiI~~~~~~~~~~~~~~~~~~~~iPvV~~~~~~ 99 (293)
T 3l6u_A 65 VDAIFITTLDDVYIGSAIEEAKKAGIPVFAIDRMI 99 (293)
T ss_dssp CSEEEEECSCTTTTHHHHHHHHHTTCCEEEESSCC
T ss_pred CCEEEEecCChHHHHHHHHHHHHcCCCEEEecCCC
Confidence 544 4557777777788899999999999997643
No 132
>2o1x_A 1-deoxy-D-xylulose-5-phosphate synthase; thiamin, isoprenoid, DXS, transferase; HET: TDP; 2.90A {Deinococcus radiodurans}
Probab=47.32 E-value=20 Score=27.50 Aligned_cols=35 Identities=9% Similarity=0.015 Sum_probs=30.1
Q ss_pred cEEEEcCCHHHHHHHHHHHHhCCCcEEEEcCCCCC
Q psy4717 31 RYWCITESTEDVEKVVQVAHDHNLVIIPFGGGTNV 65 (90)
Q Consensus 31 ~~vv~P~s~~~v~~vv~~a~~~~i~v~~~G~G~n~ 65 (90)
-.|+.|.+.+|+..++++|-+.+-|++++-...+.
T Consensus 449 l~v~~P~d~~e~~~~~~~a~~~~~Pv~i~~~r~~~ 483 (629)
T 2o1x_A 449 VRIGLPKDAAELRGMLKYAQTHDGPFAIRYPRGNT 483 (629)
T ss_dssp CEEECCSSHHHHHHHHHHHHHSSSCEEEECCSSBC
T ss_pred cEEEecCCHHHHHHHHHHHHhCCCCEEEEecCCCC
Confidence 56899999999999999999999999988765443
No 133
>1gcy_A Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-barrel, beta sheet; 1.60A {Pseudomonas stutzeri} SCOP: b.71.1.1 c.1.8.1 PDB: 1jdc_A* 1jda_A* 1jdd_A* 1qi5_A* 1qi3_A* 1qi4_A* 2amg_A 1qpk_A*
Probab=47.13 E-value=18 Score=26.94 Aligned_cols=22 Identities=5% Similarity=0.101 Sum_probs=20.4
Q ss_pred CCHHHHHHHHHHHHhCCCcEEE
Q psy4717 37 ESTEDVEKVVQVAHDHNLVIIP 58 (90)
Q Consensus 37 ~s~~~v~~vv~~a~~~~i~v~~ 58 (90)
.+.+|++++++.|+++||.|+.
T Consensus 90 Gt~~dfk~Lv~~aH~~GI~Vil 111 (527)
T 1gcy_A 90 GSDAQLRQAASALGGAGVKVLY 111 (527)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEE
T ss_pred CCHHHHHHHHHHHHHCCCEEEE
Confidence 5899999999999999999876
No 134
>1g8m_A Aicar transformylase-IMP cyclohydrolase; homodimer, 2 functional domains, IMPCH domain = alpha/beta/alpha; HET: G; 1.75A {Gallus gallus} SCOP: c.24.1.3 c.97.1.4 PDB: 1thz_A* 2b1g_A* 2b1i_A* 2iu0_A* 2iu3_A* 1m9n_A* 1oz0_A* 1pkx_A* 1p4r_A* 1pl0_A*
Probab=47.10 E-value=17 Score=28.34 Aligned_cols=36 Identities=14% Similarity=0.249 Sum_probs=28.1
Q ss_pred cCccEEEEcCCHHHHHHHHHHHHhCCCcEEEEcCCC
Q psy4717 28 IGTRYWCITESTEDVEKVVQVAHDHNLVIIPFGGGT 63 (90)
Q Consensus 28 ~~p~~vv~P~s~~~v~~vv~~a~~~~i~v~~~G~G~ 63 (90)
.+..+|++|..---=.++++.|+++|+.++.-|--|
T Consensus 555 aGV~aIiQPGGSiRD~evI~aane~giaMvfTG~Rh 590 (593)
T 1g8m_A 555 IGVQFIVAPSGSAADEVVIEACNELGITLIHTNLRL 590 (593)
T ss_dssp TTEEEEEEECCCTTHHHHHHHHHHHTCEEEEESCCC
T ss_pred hCCeEEECCCCCcCCHHHHHHHHHcCCeEEECCCCC
Confidence 357889999765555788999999999988876544
No 135
>1ujn_A Dehydroquinate synthase; riken structu genomics/proteomics initiative, RSGI, structural genomics,; 1.80A {Thermus thermophilus} SCOP: e.22.1.1
Probab=46.94 E-value=10 Score=26.98 Aligned_cols=29 Identities=31% Similarity=0.413 Sum_probs=22.8
Q ss_pred CCHHHHHHHHHHHHhCCC----cEEEEcCCCCC
Q psy4717 37 ESTEDVEKVVQVAHDHNL----VIIPFGGGTNV 65 (90)
Q Consensus 37 ~s~~~v~~vv~~a~~~~i----~v~~~G~G~n~ 65 (90)
.+.+.+.++++.+.++++ -++.+|||+-+
T Consensus 65 ~~~~~v~~~~~~~~~~~~~r~d~IIavGGGsv~ 97 (348)
T 1ujn_A 65 KSLEVYGKVLSWLAEKGLPRNATLLVVGGGTLT 97 (348)
T ss_dssp SSHHHHHHHHHHHHHHTCCTTCEEEEEESHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCCCCEEEEECCcHHH
Confidence 467889999998888775 57788998743
No 136
>1v72_A Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2.05A {Pseudomonas putida} SCOP: c.67.1.1
Probab=46.90 E-value=19 Score=24.15 Aligned_cols=22 Identities=18% Similarity=0.271 Sum_probs=19.4
Q ss_pred HHHHHHHHHHHHhCCCcEEEEc
Q psy4717 39 TEDVEKVVQVAHDHNLVIIPFG 60 (90)
Q Consensus 39 ~~~v~~vv~~a~~~~i~v~~~G 60 (90)
.++++++.++|+++++.++.=+
T Consensus 159 ~~~l~~i~~~~~~~~~~li~D~ 180 (356)
T 1v72_A 159 LDEIEAIGDVCKSSSLGLHMDG 180 (356)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHHHHcCCeEEEEc
Confidence 7999999999999999887743
No 137
>3can_A Pyruvate-formate lyase-activating enzyme; structural genomics, pyruvate-formate lyase-activating enzym MCSG, APC20359.1; 1.80A {Bacteroides vulgatus atcc 8482}
Probab=46.78 E-value=32 Score=21.37 Aligned_cols=24 Identities=13% Similarity=0.194 Sum_probs=19.8
Q ss_pred EcCCHHH--HHHHHHHHHhCCCcEEE
Q psy4717 35 ITESTED--VEKVVQVAHDHNLVIIP 58 (90)
Q Consensus 35 ~P~s~~~--v~~vv~~a~~~~i~v~~ 58 (90)
.|.+.++ +.++.+.++++|+++..
T Consensus 155 ~~~~~e~~~l~~~~~~~~~~g~~~~i 180 (182)
T 3can_A 155 KMQTPSEEVQQQCIQILTDYGLKATI 180 (182)
T ss_dssp CCBCCCHHHHHHHHHHHHHTTCCEEE
T ss_pred CCCCHHHHHHHHHHHHHHHcCCceEe
Confidence 3555666 99999999999999887
No 138
>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}
Probab=46.33 E-value=19 Score=24.44 Aligned_cols=22 Identities=14% Similarity=0.191 Sum_probs=18.9
Q ss_pred CHHHHHHHHHHHHhCCCcEEEE
Q psy4717 38 STEDVEKVVQVAHDHNLVIIPF 59 (90)
Q Consensus 38 s~~~v~~vv~~a~~~~i~v~~~ 59 (90)
+.+++.+++++|+++++.++.=
T Consensus 168 ~~~~l~~l~~~~~~~~~~li~D 189 (377)
T 3fdb_A 168 APEWLNELCDLAHRYDARVLVD 189 (377)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEE
T ss_pred CHHHHHHHHHHHHHcCCEEEEE
Confidence 4579999999999999988763
No 139
>2lju_A Putative oxidoreductase; structural genomics, seattle structural GENO center for infectious disease, ssgcid; NMR {Ehrlichia chaffeensis}
Probab=46.20 E-value=18 Score=22.09 Aligned_cols=18 Identities=17% Similarity=0.152 Sum_probs=15.5
Q ss_pred HHHHHHHHhCCCcEEEEc
Q psy4717 43 EKVVQVAHDHNLVIIPFG 60 (90)
Q Consensus 43 ~~vv~~a~~~~i~v~~~G 60 (90)
.+++.+|.++|+++.+.-
T Consensus 70 E~AiayAek~G~~y~V~e 87 (108)
T 2lju_A 70 ELAIAYAVAHKIDYTVLQ 87 (108)
T ss_dssp HHHHHHHHHTTCEEEEEC
T ss_pred HHHHHHHHHcCCEEEEec
Confidence 467899999999999874
No 140
>1oj7_A Hypothetical oxidoreductase YQHD; structural genomics; HET: NZQ; 2.0A {Escherichia coli} SCOP: e.22.1.2
Probab=45.78 E-value=10 Score=27.45 Aligned_cols=29 Identities=17% Similarity=0.504 Sum_probs=24.0
Q ss_pred CCHHHHHHHHHHHHhCCCc-EEEEcCCCCC
Q psy4717 37 ESTEDVEKVVQVAHDHNLV-IIPFGGGTNV 65 (90)
Q Consensus 37 ~s~~~v~~vv~~a~~~~i~-v~~~G~G~n~ 65 (90)
.+.+.|.++++.+++.++. ++.+|||+-+
T Consensus 90 p~~~~v~~~~~~~~~~~~D~IIavGGGsvi 119 (408)
T 1oj7_A 90 PAYETLMNAVKLVREQKVTFLLAVGGGSVL 119 (408)
T ss_dssp CBHHHHHHHHHHHHHHTCCEEEEEESHHHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEEeCCchHH
Confidence 4789999999999998885 5669999843
No 141
>2hq2_A Putative heme/hemoglobin transport protein; heme oxygenase, structural repeat; HET: HEM; 1.45A {Escherichia coli} SCOP: e.62.1.1 PDB: 1u9t_A
Probab=45.70 E-value=8 Score=28.27 Aligned_cols=40 Identities=13% Similarity=0.163 Sum_probs=30.6
Q ss_pred eecCccEEEEcCCHHHHHHHHHHHHhCCCcEEEEcCCCCC
Q psy4717 26 IFIGTRYWCITESTEDVEKVVQVAHDHNLVIIPFGGGTNV 65 (90)
Q Consensus 26 ~~~~p~~vv~P~s~~~v~~vv~~a~~~~i~v~~~G~G~n~ 65 (90)
|+.-++-++++-+.+.|..+++.|.+.++|++++=|..+.
T Consensus 222 ~r~~g~~~A~~v~~~al~~lL~~aa~~~~pIM~FVgN~Gc 261 (354)
T 2hq2_A 222 FNLVADDLACKVSNSALAQILESAQQDGNEIMVFVGNRGC 261 (354)
T ss_dssp HHHSCTTTEEEECTTHHHHHHHHHHHHCCCEEEEEECSSE
T ss_pred HHhcCccceEEeCHHHHHHHHHHHHhcCCcEEEEecCCce
Confidence 4443334577777889999999999999999988665543
No 142
>2ocz_A 3-dehydroquinate dehydratase; structural genomics, DH streptococcus pyogenes, dehydroshikimate, PSI-2, protein ST initiative; HET: MSE; 1.85A {Streptococcus pyogenes serotype M1}
Probab=45.68 E-value=25 Score=23.67 Aligned_cols=34 Identities=12% Similarity=0.176 Sum_probs=28.0
Q ss_pred ccEEEEcCCHHHHHHHHHHHHh-----CCCcEEEEcCCC
Q psy4717 30 TRYWCITESTEDVEKVVQVAHD-----HNLVIIPFGGGT 63 (90)
Q Consensus 30 p~~vv~P~s~~~v~~vv~~a~~-----~~i~v~~~G~G~ 63 (90)
++.++.|++.+|+..++++..+ .+.|++.++-|.
T Consensus 145 vKia~~a~~~~D~l~ll~~~~~~~~~~~~~P~I~~~MG~ 183 (231)
T 2ocz_A 145 VKIAVMPQSEQDVLDLMNYTRGFKTLNPEQEFATISMGK 183 (231)
T ss_dssp EEEEECCSSHHHHHHHHHHHHHHHHHCTTCEEEEEECHH
T ss_pred EEEEeecCCHHHHHHHHHHHHHHhhccCCCCEEEEEcCC
Confidence 6788999999999999987754 467999887764
No 143
>4adb_A Succinylornithine transaminase; transferase, PLP enzymes, aminotransferase; HET: PLP; 2.20A {Escherichia coli} PDB: 4adc_A* 4add_A* 4ade_A
Probab=44.88 E-value=22 Score=24.52 Aligned_cols=22 Identities=18% Similarity=0.217 Sum_probs=19.6
Q ss_pred CHHHHHHHHHHHHhCCCcEEEE
Q psy4717 38 STEDVEKVVQVAHDHNLVIIPF 59 (90)
Q Consensus 38 s~~~v~~vv~~a~~~~i~v~~~ 59 (90)
+.+++.++.++|+++++.++.=
T Consensus 202 ~~~~l~~l~~l~~~~~~~li~D 223 (406)
T 4adb_A 202 SNAFLQGLRELCNRHNALLIFD 223 (406)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEE
T ss_pred CHHHHHHHHHHHHHcCCEEEEe
Confidence 7799999999999999988763
No 144
>2dh2_A 4F2 cell-surface antigen heavy chain; TIM-barrel, glycosidase like, antiparallel beta-sheet, greek terminal domain, extracellular domain; 2.10A {Homo sapiens} PDB: 2dh3_A
Probab=44.81 E-value=21 Score=25.85 Aligned_cols=22 Identities=27% Similarity=0.434 Sum_probs=20.3
Q ss_pred CCHHHHHHHHHHHHhCCCcEEE
Q psy4717 37 ESTEDVEKVVQVAHDHNLVIIP 58 (90)
Q Consensus 37 ~s~~~v~~vv~~a~~~~i~v~~ 58 (90)
.+.+|++++++.|+++|+.++.
T Consensus 79 Gt~~d~~~lv~~ah~~Gi~vil 100 (424)
T 2dh2_A 79 GSKEDFDSLLQSAKKKSIRVIL 100 (424)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEE
T ss_pred CCHHHHHHHHHHHHHCCCEEEE
Confidence 5789999999999999999876
No 145
>2cho_A Glucosaminidase, hexosaminiase; O-GLCNACASE, hydrolase, N-acetylglucosamine; 1.85A {Bacteroides thetaiotaomicron} SCOP: a.246.1.1 c.1.8.10 d.92.2.3 PDB: 2chn_A 2vvn_A* 2vvs_A* 2x0h_A* 2xm2_A* 2w4x_A* 2w66_A* 2w67_A* 2wca_A* 2xj7_A* 2xm1_A* 2j47_A* 2jiw_A* 2wzh_A* 2wzi_A* 2j4g_A*
Probab=44.72 E-value=14 Score=29.29 Aligned_cols=31 Identities=13% Similarity=0.358 Sum_probs=24.2
Q ss_pred EcC-CHHHHHHHHHHHHhCCCcEEE-EcCCCCC
Q psy4717 35 ITE-STEDVEKVVQVAHDHNLVIIP-FGGGTNV 65 (90)
Q Consensus 35 ~P~-s~~~v~~vv~~a~~~~i~v~~-~G~G~n~ 65 (90)
+|. +.+|+++++++|++.+|.|+| +.-|+.+
T Consensus 180 yP~lt~~ei~elv~yA~~rgI~vvpeI~Pg~~~ 212 (716)
T 2cho_A 180 YPDKEAAQLQELVAVANENEVDFVWAIHPGQDI 212 (716)
T ss_dssp CCHHHHHHHHHHHHHHHHTTCEEEEEECCTTTC
T ss_pred CChhhHHHHHHHHHHHHHcCCEEEEeecccccC
Confidence 454 789999999999999999987 3334443
No 146
>1tv8_A MOAA, molybdenum cofactor biosynthesis protein A; TIM barrel, ligand binding protein; HET: SAM; 2.20A {Staphylococcus aureus} SCOP: c.1.28.3 PDB: 1tv7_A* 2fb3_A* 2fb2_A*
Probab=44.58 E-value=34 Score=23.55 Aligned_cols=37 Identities=5% Similarity=0.180 Sum_probs=28.3
Q ss_pred cCccEEEEcC-CHHHHHHHHHHHHhCCCc-----EEEEcCCCC
Q psy4717 28 IGTRYWCITE-STEDVEKVVQVAHDHNLV-----IIPFGGGTN 64 (90)
Q Consensus 28 ~~p~~vv~P~-s~~~v~~vv~~a~~~~i~-----v~~~G~G~n 64 (90)
+....++.|. +.+++.++++++.+.++. ++|.+++..
T Consensus 162 v~i~~vv~~g~n~~ei~~~~~~~~~~g~~~~~i~~~p~~~~~~ 204 (340)
T 1tv8_A 162 VKVNVVIQKGINDDQIIPMLEYFKDKHIEIRFIEFMDVGNDNG 204 (340)
T ss_dssp EEEEEEECTTTTGGGHHHHHHHHHHTTCCEEEEECCCBCSSSS
T ss_pred EEEEEEEeCCCCHHHHHHHHHHHHhcCCeEEEEEeeEcCCCcc
Confidence 4456778887 999999999999999875 345666544
No 147
>2bhu_A Maltooligosyltrehalose trehalohydrolase; alpha-amylase, protein-carbohydrate complex, desiccation resistance; HET: TRS PGE; 1.1A {Deinococcus radiodurans} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 2bhy_A* 2bhz_A* 2bxy_A* 2bxz_A* 2by0_A* 2by1_A* 2by2_A* 2by3_A*
Probab=44.56 E-value=29 Score=26.48 Aligned_cols=22 Identities=27% Similarity=0.336 Sum_probs=20.3
Q ss_pred CCHHHHHHHHHHHHhCCCcEEE
Q psy4717 37 ESTEDVEKVVQVAHDHNLVIIP 58 (90)
Q Consensus 37 ~s~~~v~~vv~~a~~~~i~v~~ 58 (90)
.+.+|++++++.|++.||.|+.
T Consensus 190 Gt~~d~~~lv~~~H~~Gi~Vil 211 (602)
T 2bhu_A 190 GRPEDLMALVDAAHRLGLGVFL 211 (602)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEE
T ss_pred CCHHHHHHHHHHHHHCCCEEEE
Confidence 5799999999999999999875
No 148
>3bc8_A O-phosphoseryl-tRNA(SEC) selenium transferase; disorder-order transition, phosphate-loop, pyridoxal phospha selenocysteine synthase (SECS, sepsecs); HET: LLP; 1.65A {Mus musculus} SCOP: c.67.1.9 PDB: 3bca_A* 3bcb_A*
Probab=44.50 E-value=5.5 Score=29.79 Aligned_cols=24 Identities=4% Similarity=0.155 Sum_probs=21.3
Q ss_pred cCCHHHHHHHHHHHHhCCCcEEEE
Q psy4717 36 TESTEDVEKVVQVAHDHNLVIIPF 59 (90)
Q Consensus 36 P~s~~~v~~vv~~a~~~~i~v~~~ 59 (90)
|.+.+++.++.++|+++++|+.+=
T Consensus 211 ~g~~ddl~~Ia~ia~~~gi~l~VD 234 (450)
T 3bc8_A 211 PRVPDRLEELAVICANYDIPHVVN 234 (450)
T ss_dssp TBCCCCHHHHHHHHHHHTCCEEEE
T ss_pred CceecCHHHHHHHHHHCCCeEEEE
Confidence 456789999999999999999985
No 149
>4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A
Probab=44.49 E-value=7.6 Score=26.36 Aligned_cols=24 Identities=17% Similarity=0.349 Sum_probs=21.2
Q ss_pred HHHHHHHHHHhCCCcEEEEcCCCC
Q psy4717 41 DVEKVVQVAHDHNLVIIPFGGGTN 64 (90)
Q Consensus 41 ~v~~vv~~a~~~~i~v~~~G~G~n 64 (90)
.+.++++.|+++|+++++.+||..
T Consensus 145 g~~e~i~~l~~~gi~v~ivSgg~~ 168 (297)
T 4fe3_A 145 GYENFFGKLQQHGIPVFIFSAGIG 168 (297)
T ss_dssp THHHHHHHHHHTTCCEEEEEEEEH
T ss_pred cHHHHHHHHHHcCCeEEEEeCCcH
Confidence 467899999999999999999864
No 150
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=44.28 E-value=23 Score=21.47 Aligned_cols=34 Identities=9% Similarity=-0.037 Sum_probs=27.8
Q ss_pred ccEEEEcCCHHHHHHHHHHHHhCCCcEEEEcCCC
Q psy4717 30 TRYWCITESTEDVEKVVQVAHDHNLVIIPFGGGT 63 (90)
Q Consensus 30 p~~vv~P~s~~~v~~vv~~a~~~~i~v~~~G~G~ 63 (90)
+|.++.-...+.+.++++.|.+.|++.+.+..|.
T Consensus 59 vDlavi~~p~~~v~~~v~e~~~~g~k~v~~~~G~ 92 (122)
T 3ff4_A 59 VDTVTLYINPQNQLSEYNYILSLKPKRVIFNPGT 92 (122)
T ss_dssp CCEEEECSCHHHHGGGHHHHHHHCCSEEEECTTC
T ss_pred CCEEEEEeCHHHHHHHHHHHHhcCCCEEEECCCC
Confidence 6888888888999999999988888877776654
No 151
>3v7e_A Ribosome-associated protein L7AE-like; RNA-protein complex, K-turn, L7AE-like, A member L7AE/L30E superfamily; HET: SAM; 2.80A {Bacillus subtilis}
Probab=44.13 E-value=20 Score=20.20 Aligned_cols=33 Identities=12% Similarity=0.215 Sum_probs=26.2
Q ss_pred CccEEEEcCCHH--HHHHHHHHHHhCCCcEEEEcC
Q psy4717 29 GTRYWCITESTE--DVEKVVQVAHDHNLVIIPFGG 61 (90)
Q Consensus 29 ~p~~vv~P~s~~--~v~~vv~~a~~~~i~v~~~G~ 61 (90)
.+..|+..++.+ -+..+..+|.++++|+..+.+
T Consensus 27 kaklViiA~D~~~~~~~~i~~lc~~~~Ip~~~v~s 61 (82)
T 3v7e_A 27 SVKEVVVAKDADPILTSSVVSLAEDQGISVSMVES 61 (82)
T ss_dssp CEEEEEEETTSCHHHHHHHHHHHHHHTCCEEEESC
T ss_pred CeeEEEEeCCCCHHHHHHHHHHHHHcCCCEEEECC
Confidence 377788877764 466788899999999999874
No 152
>1ua7_A Alpha-amylase; beta-alpha-barrels, acarbose, greek-KEY motif, hydrolase; HET: ACI GLD GLC G6D BGC; 2.21A {Bacillus subtilis} SCOP: b.71.1.1 c.1.8.1 PDB: 1bag_A* 3dc0_A
Probab=43.83 E-value=16 Score=26.26 Aligned_cols=22 Identities=9% Similarity=0.291 Sum_probs=20.5
Q ss_pred CCHHHHHHHHHHHHhCCCcEEE
Q psy4717 37 ESTEDVEKVVQVAHDHNLVIIP 58 (90)
Q Consensus 37 ~s~~~v~~vv~~a~~~~i~v~~ 58 (90)
.+.+|++++++.|+++|+.|+.
T Consensus 72 G~~~d~~~lv~~~h~~Gi~Vil 93 (422)
T 1ua7_A 72 GTEQEFKEMCAAAEEYGIKVIV 93 (422)
T ss_dssp EEHHHHHHHHHHHHTTTCEEEE
T ss_pred CCHHHHHHHHHHHHHCCCEEEE
Confidence 5899999999999999999876
No 153
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=43.59 E-value=31 Score=24.19 Aligned_cols=34 Identities=15% Similarity=-0.046 Sum_probs=29.8
Q ss_pred CccEEEEcCCHHHHHHHHHHHHhCCCcEEEEcCC
Q psy4717 29 GTRYWCITESTEDVEKVVQVAHDHNLVIIPFGGG 62 (90)
Q Consensus 29 ~p~~vv~P~s~~~v~~vv~~a~~~~i~v~~~G~G 62 (90)
.|++++--++.+.+.+.+++|.++|++++.-..|
T Consensus 88 ~aDVvIDFT~p~a~~~~~~~~l~~Gv~vViGTTG 121 (288)
T 3ijp_A 88 NTEGILDFSQPQASVLYANYAAQKSLIHIIGTTG 121 (288)
T ss_dssp SCSEEEECSCHHHHHHHHHHHHHHTCEEEECCCC
T ss_pred CCCEEEEcCCHHHHHHHHHHHHHcCCCEEEECCC
Confidence 5899998899999999999999999999875444
No 154
>2wc7_A Alpha amylase, catalytic region; CD/PUL-hydrolyzing enzymes, hydrolase, glycosidase, neopullu; 2.37A {Nostoc punctiforme} PDB: 2wcs_A 2wkg_A
Probab=43.58 E-value=16 Score=26.69 Aligned_cols=22 Identities=18% Similarity=0.444 Sum_probs=19.9
Q ss_pred CCHHHHHHHHHHHHhCCCcEEE
Q psy4717 37 ESTEDVEKVVQVAHDHNLVIIP 58 (90)
Q Consensus 37 ~s~~~v~~vv~~a~~~~i~v~~ 58 (90)
.+.+|++++++.|+++||.|+.
T Consensus 100 Gt~~df~~Lv~~aH~~Gi~Vil 121 (488)
T 2wc7_A 100 GGNEAFKELLDAAHQRNIKVVL 121 (488)
T ss_dssp THHHHHHHHHHHHHHTTCEEEE
T ss_pred CCHHHHHHHHHHHHHCCCEEEE
Confidence 4689999999999999999875
No 155
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=43.57 E-value=23 Score=24.17 Aligned_cols=21 Identities=19% Similarity=0.531 Sum_probs=18.4
Q ss_pred HHHHHHHHHHHHhCCCcEEEE
Q psy4717 39 TEDVEKVVQVAHDHNLVIIPF 59 (90)
Q Consensus 39 ~~~v~~vv~~a~~~~i~v~~~ 59 (90)
.+++.++.++|+++++.++.=
T Consensus 179 ~~~l~~i~~~~~~~~~~li~D 199 (391)
T 3dzz_A 179 EEEVKRIAELCAKHQVLLISD 199 (391)
T ss_dssp HHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHHHHCCCEEEEe
Confidence 389999999999999988764
No 156
>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*
Probab=43.43 E-value=23 Score=24.16 Aligned_cols=20 Identities=25% Similarity=0.451 Sum_probs=17.9
Q ss_pred HHHHHHHHHHHhCCCcEEEE
Q psy4717 40 EDVEKVVQVAHDHNLVIIPF 59 (90)
Q Consensus 40 ~~v~~vv~~a~~~~i~v~~~ 59 (90)
+++.++.++|+++++.++.=
T Consensus 184 ~~l~~i~~~~~~~~~~li~D 203 (391)
T 4dq6_A 184 DELKKLGDICLKHNVKIISD 203 (391)
T ss_dssp HHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHHHcCCEEEee
Confidence 89999999999999988763
No 157
>2o1s_A 1-deoxy-D-xylulose-5-phosphate synthase; DXS, thiamine, isoprenoid, transferase; HET: TDP; 2.40A {Escherichia coli}
Probab=43.17 E-value=26 Score=26.79 Aligned_cols=35 Identities=3% Similarity=-0.160 Sum_probs=29.5
Q ss_pred cEEEEcCCHHHHHHHHHHHHhC-CCcEEEEcCCCCC
Q psy4717 31 RYWCITESTEDVEKVVQVAHDH-NLVIIPFGGGTNV 65 (90)
Q Consensus 31 ~~vv~P~s~~~v~~vv~~a~~~-~i~v~~~G~G~n~ 65 (90)
-.|+.|.+.+|+..+++.|-+. +-|++++-...++
T Consensus 446 l~v~~P~d~~e~~~~l~~a~~~~~~Pv~i~~~r~~~ 481 (621)
T 2o1s_A 446 MVIMTPSDENECRQMLYTGYHYNDGPSAVRYPRGNA 481 (621)
T ss_dssp CEEECCSSHHHHHHHHHHHHHCCSSCEEEECCSSBC
T ss_pred CEEEecCCHHHHHHHHHHHHHcCCCCEEEEeCCCCC
Confidence 5689999999999999999998 8898887665443
No 158
>1m53_A Isomaltulose synthase; klebsiella SP. LX3, sucrose isomerization, isomerase; 2.20A {Klebsiella SP} SCOP: b.71.1.1 c.1.8.1
Probab=43.16 E-value=22 Score=26.71 Aligned_cols=22 Identities=18% Similarity=0.345 Sum_probs=20.3
Q ss_pred CCHHHHHHHHHHHHhCCCcEEE
Q psy4717 37 ESTEDVEKVVQVAHDHNLVIIP 58 (90)
Q Consensus 37 ~s~~~v~~vv~~a~~~~i~v~~ 58 (90)
.+.+|++++++.|++.||.|+.
T Consensus 90 Gt~~df~~lv~~aH~~Gi~Vil 111 (570)
T 1m53_A 90 GTMEDFDSLVAEMKKRNMRLMI 111 (570)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEE
T ss_pred CCHHHHHHHHHHHHHCCCEEEE
Confidence 6899999999999999999874
No 159
>1jae_A Alpha-amylase; glycosidase, carbohydrate metabolism, 4-glucan-4-glucanohydrolase, hydrolase; 1.65A {Tenebrio molitor} SCOP: b.71.1.1 c.1.8.1 PDB: 1clv_A 1tmq_A 1viw_A*
Probab=42.97 E-value=18 Score=26.51 Aligned_cols=22 Identities=9% Similarity=0.129 Sum_probs=20.3
Q ss_pred CCHHHHHHHHHHHHhCCCcEEE
Q psy4717 37 ESTEDVEKVVQVAHDHNLVIIP 58 (90)
Q Consensus 37 ~s~~~v~~vv~~a~~~~i~v~~ 58 (90)
.+.+|++++++.|+++|+.|+.
T Consensus 72 Gt~~d~~~lv~~~h~~Gi~Vil 93 (471)
T 1jae_A 72 GDESAFTDMTRRCNDAGVRIYV 93 (471)
T ss_dssp EEHHHHHHHHHHHHHTTCEEEE
T ss_pred CCHHHHHHHHHHHHHCCCEEEE
Confidence 4789999999999999999887
No 160
>3l84_A Transketolase; TKT, structural genomics, center for structur genomics of infectious diseases, csgid, transferase; HET: MSE; 1.36A {Campylobacter jejuni} PDB: 3m6l_A* 3m34_A* 3m7i_A*
Probab=42.82 E-value=27 Score=27.15 Aligned_cols=31 Identities=10% Similarity=-0.130 Sum_probs=26.9
Q ss_pred cEEEEcCCHHHHHHHHHHHHhCCCcEEEEcC
Q psy4717 31 RYWCITESTEDVEKVVQVAHDHNLVIIPFGG 61 (90)
Q Consensus 31 ~~vv~P~s~~~v~~vv~~a~~~~i~v~~~G~ 61 (90)
-.|+.|.+..|...++++|-+.+-|++.+=.
T Consensus 468 l~V~~P~d~~e~~~~l~~A~~~~~Pv~ir~~ 498 (632)
T 3l84_A 468 FLTFRPADGVENVKAWQIALNADIPSAFVLS 498 (632)
T ss_dssp CEEECCSSHHHHHHHHHHHHHCSSCEEEECC
T ss_pred CEEEecCCHHHHHHHHHHHHhCCCCEEEEEc
Confidence 4689999999999999999998888887643
No 161
>1j0h_A Neopullulanase; beta-alpha-barrels, hydrolase; 1.90A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1j0i_A* 1j0j_A* 1j0k_A* 1sma_A 1gvi_A*
Probab=42.50 E-value=23 Score=26.73 Aligned_cols=22 Identities=9% Similarity=0.374 Sum_probs=20.0
Q ss_pred CCHHHHHHHHHHHHhCCCcEEE
Q psy4717 37 ESTEDVEKVVQVAHDHNLVIIP 58 (90)
Q Consensus 37 ~s~~~v~~vv~~a~~~~i~v~~ 58 (90)
.+.+|++++++.|+++||.|+.
T Consensus 220 Gt~~df~~lv~~~H~~Gi~Vil 241 (588)
T 1j0h_A 220 GDKETLKTLIDRCHEKGIRVML 241 (588)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEE
T ss_pred CCHHHHHHHHHHHHHCCCEEEE
Confidence 4689999999999999999875
No 162
>3m9w_A D-xylose-binding periplasmic protein; xylose binding protein, conformational changes, SUGA protein; 2.15A {Escherichia coli} PDB: 3m9x_A* 3ma0_A*
Probab=42.41 E-value=15 Score=24.57 Aligned_cols=34 Identities=12% Similarity=0.161 Sum_probs=25.8
Q ss_pred ccE-EEEcCCHHHHHHHHHHHHhCCCcEEEEcCCC
Q psy4717 30 TRY-WCITESTEDVEKVVQVAHDHNLVIIPFGGGT 63 (90)
Q Consensus 30 p~~-vv~P~s~~~v~~vv~~a~~~~i~v~~~G~G~ 63 (90)
++. ++.|.+.+.+...++.+.+.++|++.++...
T Consensus 59 vdgiIi~~~~~~~~~~~~~~~~~~~iPvV~~~~~~ 93 (313)
T 3m9w_A 59 VDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMI 93 (313)
T ss_dssp CSEEEEECSSTTSCHHHHHHHHTTTCEEEEESSCC
T ss_pred CCEEEEeCCChhhhHHHHHHHHHCCCeEEEECCcC
Confidence 544 4566666667788899999999999997643
No 163
>1sg6_A Pentafunctional AROM polypeptide; shikimate pathway, aromatic amino acid biosynthesis, DHQS, O form J, domain movement, cyclase, lyase; HET: NAD; 1.70A {Emericella nidulans} SCOP: e.22.1.1 PDB: 1nr5_A* 1nrx_A* 1nua_A 1nva_A* 1nvb_A* 1nvd_A* 1nve_A* 1nvf_A* 1dqs_A*
Probab=42.32 E-value=17 Score=26.28 Aligned_cols=28 Identities=25% Similarity=0.357 Sum_probs=23.5
Q ss_pred CHHHHHHHHHHHHhCC--C----cEEEEcCCCCC
Q psy4717 38 STEDVEKVVQVAHDHN--L----VIIPFGGGTNV 65 (90)
Q Consensus 38 s~~~v~~vv~~a~~~~--i----~v~~~G~G~n~ 65 (90)
+.+.+.++++++.+++ + -++.+|||+-.
T Consensus 85 ~~~~v~~~~~~~~~~~~~~~r~d~iIalGGGsv~ 118 (393)
T 1sg6_A 85 SRQTKADIEDWMLSQNPPCGRDTVVIALGGGVIG 118 (393)
T ss_dssp SHHHHHHHHHHHHTSSSCCCTTCEEEEEESHHHH
T ss_pred CHHHHHHHHHHHHHcCCCCCCCCEEEEECCcHHH
Confidence 7799999999999988 5 57779999844
No 164
>1o2d_A Alcohol dehydrogenase, iron-containing; TM0920, structural genomics, JCSG, PSI, protein structure initiative; HET: MSE NAP TRS; 1.30A {Thermotoga maritima} SCOP: e.22.1.2 PDB: 1vhd_A*
Probab=42.13 E-value=14 Score=26.36 Aligned_cols=28 Identities=25% Similarity=0.504 Sum_probs=23.5
Q ss_pred CHHHHHHHHHHHHhCCCc-EEEEcCCCCC
Q psy4717 38 STEDVEKVVQVAHDHNLV-IIPFGGGTNV 65 (90)
Q Consensus 38 s~~~v~~vv~~a~~~~i~-v~~~G~G~n~ 65 (90)
+.+.|.++++.+++.+.. ++.+|||+-+
T Consensus 83 ~~~~v~~~~~~~~~~~~d~IIavGGGsv~ 111 (371)
T 1o2d_A 83 SFDNVMKAVERYRNDSFDFVVGLGGGSPM 111 (371)
T ss_dssp BHHHHHHHHHHHTTSCCSEEEEEESHHHH
T ss_pred CHHHHHHHHHHHHhcCCCEEEEeCChHHH
Confidence 889999999999998875 5569999853
No 165
>3td9_A Branched chain amino acid ABC transporter, peripl amino acid-binding protein; leucine binding, structural genomics; HET: MSE PHE; 1.90A {Thermotoga maritima}
Probab=41.92 E-value=35 Score=23.14 Aligned_cols=33 Identities=12% Similarity=0.089 Sum_probs=28.4
Q ss_pred CccEEEEcCCHHHHHHHHHHHHhCCCcEEEEcC
Q psy4717 29 GTRYWCITESTEDVEKVVQVAHDHNLVIIPFGG 61 (90)
Q Consensus 29 ~p~~vv~P~s~~~v~~vv~~a~~~~i~v~~~G~ 61 (90)
.|++|+.+.+.++...+++.+++.|+.+..+|.
T Consensus 204 ~~d~v~~~~~~~~a~~~~~~~~~~g~~~~~~~~ 236 (366)
T 3td9_A 204 NPDAIYITGYYPEIALISRQARQLGFTGYILAG 236 (366)
T ss_dssp CCSEEEECSCHHHHHHHHHHHHHTTCCSEEEEC
T ss_pred CCCEEEEccchhHHHHHHHHHHHcCCCceEEee
Confidence 489999999999999999999999887655654
No 166
>2x7x_A Sensor protein; transferase, sensor histidine kinase; HET: FRU; 2.64A {Bacteroides thetaiotaomicron}
Probab=41.86 E-value=40 Score=22.62 Aligned_cols=34 Identities=15% Similarity=0.230 Sum_probs=25.2
Q ss_pred CccEEEE-cCCHHHHHHHHHHHHhCCCcEEEEcCC
Q psy4717 29 GTRYWCI-TESTEDVEKVVQVAHDHNLVIIPFGGG 62 (90)
Q Consensus 29 ~p~~vv~-P~s~~~v~~vv~~a~~~~i~v~~~G~G 62 (90)
+++.++. |.+.+.+...++.+.+.++|++.++..
T Consensus 62 ~vdgiIi~~~~~~~~~~~~~~~~~~~iPvV~~~~~ 96 (325)
T 2x7x_A 62 GVDLLIISANEAAPMTPIVEEAYQKGIPVILVDRK 96 (325)
T ss_dssp TCSEEEECCSSHHHHHHHHHHHHHTTCCEEEESSC
T ss_pred CCCEEEEeCCCHHHHHHHHHHHHHCCCeEEEeCCC
Confidence 3665554 666666677888888899999998754
No 167
>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium}
Probab=41.71 E-value=25 Score=24.30 Aligned_cols=20 Identities=25% Similarity=0.503 Sum_probs=17.9
Q ss_pred HHHHHHHHHHHHhCCCcEEE
Q psy4717 39 TEDVEKVVQVAHDHNLVIIP 58 (90)
Q Consensus 39 ~~~v~~vv~~a~~~~i~v~~ 58 (90)
.+++++++++|+++++.++.
T Consensus 199 ~~~~~~l~~~a~~~~~~li~ 218 (417)
T 3g7q_A 199 DEELMKLDRLANQHNIPLVI 218 (417)
T ss_dssp HHHHHHHHHHHHHTTCCEEE
T ss_pred HHHHHHHHHHHHHcCCEEEE
Confidence 58899999999999998775
No 168
>3pj0_A LMO0305 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, lyase; HET: LLP MSE; 1.80A {Listeria monocytogenes}
Probab=41.65 E-value=19 Score=24.40 Aligned_cols=23 Identities=22% Similarity=0.429 Sum_probs=19.6
Q ss_pred CHHHHHHHHHHHHhCCCcEEEEc
Q psy4717 38 STEDVEKVVQVAHDHNLVIIPFG 60 (90)
Q Consensus 38 s~~~v~~vv~~a~~~~i~v~~~G 60 (90)
+.+++.++.++|+++++.++.=+
T Consensus 156 ~~~~l~~l~~~~~~~~~~li~D~ 178 (359)
T 3pj0_A 156 AFEELEKISEYCHEQGISLHLDG 178 (359)
T ss_dssp CHHHHHHHHHHHHHHTCEEEEEE
T ss_pred CHHHHHHHHHHHHHcCCEEEEEC
Confidence 46899999999999999887653
No 169
>7a3h_A Endoglucanase; hydrolase, cellulose degradation, glycoside H family 5, michaelis complex, SKEW-BOAT, distortion; 0.95A {Bacillus agaradhaerens} SCOP: c.1.8.3 PDB: 1h2j_A* 1hf6_A* 1ocq_A* 1w3k_A* 1h11_A* 4a3h_A* 5a3h_A* 6a3h_A* 1w3l_A 8a3h_A* 2v38_A* 1qhz_A 1qi0_A* 1e5j_A* 1qi2_A* 1h5v_A* 1a3h_A 2a3h_A* 3a3h_A* 1lf1_A
Probab=41.47 E-value=16 Score=25.05 Aligned_cols=54 Identities=17% Similarity=0.132 Sum_probs=30.4
Q ss_pred cchhHHHHHHHHhccCccccceeeecCccEEEEcCCHHHHHHHHHHHHhCCCcEEE
Q psy4717 3 STEDVEKVVQVAHDHNLVVNHQAIFIGTRYWCITESTEDVEKVVQVAHDHNLVIIP 58 (90)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~vv~P~s~~~v~~vv~~a~~~~i~v~~ 58 (90)
+.++++.++. ..+.|...- .++...+.+..-|.-.+.+.++|++|.++|+-++.
T Consensus 45 ~~~~~~~l~~-~~G~N~VRi-p~~~~~~~~~~~~~~~~~ld~~v~~a~~~Gi~Vil 98 (303)
T 7a3h_A 45 NYESMKWLRD-DWGINVFRA-AMYTSSGGYIDDPSVKEKVKEAVEAAIDLDIYVII 98 (303)
T ss_dssp SHHHHHHHHH-HTCCCEEEE-EEESSTTSTTTCTTHHHHHHHHHHHHHHHTCEEEE
T ss_pred CHHHHHHHHH-hcCCCEEEE-EEEeCCCCccCCHHHHHHHHHHHHHHHHCCCEEEE
Confidence 3456777754 445542200 00100111222355578899999999999987664
No 170
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=41.36 E-value=36 Score=23.50 Aligned_cols=34 Identities=15% Similarity=0.085 Sum_probs=29.2
Q ss_pred CccEEEEcCCHHHHHHHHHHHHhCCCcEEEEcCC
Q psy4717 29 GTRYWCITESTEDVEKVVQVAHDHNLVIIPFGGG 62 (90)
Q Consensus 29 ~p~~vv~P~s~~~v~~vv~~a~~~~i~v~~~G~G 62 (90)
.+++|+--.+.+.+.+.++.|.++|++++.-..|
T Consensus 73 ~~DVVIDfT~p~a~~~~~~~al~~G~~vVigTTG 106 (272)
T 4f3y_A 73 EADYLIDFTLPEGTLVHLDAALRHDVKLVIGTTG 106 (272)
T ss_dssp HCSEEEECSCHHHHHHHHHHHHHHTCEEEECCCC
T ss_pred CCCEEEEcCCHHHHHHHHHHHHHcCCCEEEECCC
Confidence 3899999999999999999999999998874333
No 171
>1wzl_A Alpha-amylase II; pullulan, GH-13, alpha-amylase family, hydrolase; 2.00A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1ji2_A 1bvz_A 1vfk_A* 3a6o_A* 1wzm_A 1jf6_A 1wzk_A 2d2o_A* 1jib_A* 1jl8_A* 1vb9_A* 1g1y_A* 1vfo_A* 1vfm_A* 1vfu_A* 1jf5_A
Probab=41.34 E-value=24 Score=26.66 Aligned_cols=22 Identities=23% Similarity=0.323 Sum_probs=20.0
Q ss_pred CCHHHHHHHHHHHHhCCCcEEE
Q psy4717 37 ESTEDVEKVVQVAHDHNLVIIP 58 (90)
Q Consensus 37 ~s~~~v~~vv~~a~~~~i~v~~ 58 (90)
.+.+|++++++.|+++||.|+.
T Consensus 217 Gt~~dfk~lv~~~H~~Gi~Vil 238 (585)
T 1wzl_A 217 GDLPTFRRLVDEAHRRGIKIIL 238 (585)
T ss_dssp CCHHHHHHHHHHHHTTTCEEEE
T ss_pred CCHHHHHHHHHHHHHCCCEEEE
Confidence 3789999999999999999875
No 172
>1zja_A Trehalulose synthase; sucrose isomerase, alpha-amylase family, (beta/alpha)8 barrel; 1.60A {Pseudomonas mesoacidophila} PDB: 1zjb_A 2pwd_A* 2pwh_A 2pwg_A 2pwe_A* 2pwf_A* 3gbe_A* 3gbd_A*
Probab=41.02 E-value=25 Score=26.28 Aligned_cols=22 Identities=9% Similarity=0.311 Sum_probs=20.1
Q ss_pred CCHHHHHHHHHHHHhCCCcEEE
Q psy4717 37 ESTEDVEKVVQVAHDHNLVIIP 58 (90)
Q Consensus 37 ~s~~~v~~vv~~a~~~~i~v~~ 58 (90)
.+.+|++++++.|+++||.|+.
T Consensus 77 Gt~~df~~Lv~~aH~~Gi~Vil 98 (557)
T 1zja_A 77 GTMEDFDRLMAELKKRGMRLMV 98 (557)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEE
T ss_pred CCHHHHHHHHHHHHHCCCEEEE
Confidence 5899999999999999999874
No 173
>4aef_A Neopullulanase (alpha-amylase II); hydrolase, thermostability, high temperature; 2.34A {Pyrococcus furiosus}
Probab=40.95 E-value=25 Score=26.86 Aligned_cols=22 Identities=5% Similarity=0.114 Sum_probs=20.4
Q ss_pred CCHHHHHHHHHHHHhCCCcEEE
Q psy4717 37 ESTEDVEKVVQVAHDHNLVIIP 58 (90)
Q Consensus 37 ~s~~~v~~vv~~a~~~~i~v~~ 58 (90)
.|.+|++++|+.|++.||.|+.
T Consensus 283 Gt~~df~~LV~~aH~~GI~VIl 304 (645)
T 4aef_A 283 GGDRAFVDLLSELKRFDIKVIL 304 (645)
T ss_dssp TCHHHHHHHHHHHHHTTCEEEE
T ss_pred CCHHHHHHHHHHhhhcCCEEEE
Confidence 6889999999999999999875
No 174
>3hl0_A Maleylacetate reductase; structur genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; HET: MSE NAD EPE; 1.60A {Agrobacterium tumefaciens str}
Probab=40.80 E-value=18 Score=25.75 Aligned_cols=28 Identities=18% Similarity=0.379 Sum_probs=23.4
Q ss_pred CHHHHHHHHHHHHhCCCc-EEEEcCCCCC
Q psy4717 38 STEDVEKVVQVAHDHNLV-IIPFGGGTNV 65 (90)
Q Consensus 38 s~~~v~~vv~~a~~~~i~-v~~~G~G~n~ 65 (90)
+.+.|.++++.+++++.. ++.+|||+-+
T Consensus 72 ~~~~v~~~~~~~~~~~~D~IIavGGGs~i 100 (353)
T 3hl0_A 72 PVEVTKTAVEAYRAAGADCVVSLGGGSTT 100 (353)
T ss_dssp BHHHHHHHHHHHHHTTCSEEEEEESHHHH
T ss_pred cHHHHHHHHHHHhccCCCEEEEeCCcHHH
Confidence 678999999999998874 7888998754
No 175
>2zic_A Dextran glucosidase; TIM barrel, (beta/alpha)8-barrel, hydrolase; 2.20A {Streptococcus mutans} PDB: 2zid_A*
Probab=40.73 E-value=25 Score=26.29 Aligned_cols=22 Identities=18% Similarity=0.291 Sum_probs=20.3
Q ss_pred CCHHHHHHHHHHHHhCCCcEEE
Q psy4717 37 ESTEDVEKVVQVAHDHNLVIIP 58 (90)
Q Consensus 37 ~s~~~v~~vv~~a~~~~i~v~~ 58 (90)
.+.+|++++++.|++.||.|+.
T Consensus 76 Gt~~df~~lv~~~h~~Gi~Vil 97 (543)
T 2zic_A 76 GNMADMDNLLTQAKMRGIKIIM 97 (543)
T ss_dssp CCHHHHHHHHHHHHTTTCEEEE
T ss_pred CCHHHHHHHHHHHHHCCCEEEE
Confidence 5899999999999999999875
No 176
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=40.66 E-value=59 Score=21.09 Aligned_cols=26 Identities=15% Similarity=0.120 Sum_probs=11.6
Q ss_pred EEEcCCHHHHHHHHHHHHhCCCcEEE
Q psy4717 33 WCITESTEDVEKVVQVAHDHNLVIIP 58 (90)
Q Consensus 33 vv~P~s~~~v~~vv~~a~~~~i~v~~ 58 (90)
|+.+...+.+.++.+.|.++|+.+..
T Consensus 108 v~~~~~~~~~~~l~~~a~~~gv~l~~ 133 (262)
T 3p6l_A 108 ITCEPALSDWDLVEKLSKQYNIKISV 133 (262)
T ss_dssp EEECCCGGGHHHHHHHHHHHTCEEEE
T ss_pred EEecCCHHHHHHHHHHHHHhCCEEEE
Confidence 33333334444444555554444443
No 177
>3uug_A Multiple sugar-binding periplasmic receptor CHVE; periplasmic binding protein, sugar-binding protein, sugar binding protein; HET: BDP; 1.75A {Agrobacterium tumefaciens} PDB: 3urm_A*
Probab=40.58 E-value=20 Score=23.92 Aligned_cols=34 Identities=9% Similarity=0.177 Sum_probs=26.0
Q ss_pred ccEE-EEcCCHHHHHHHHHHHHhCCCcEEEEcCCC
Q psy4717 30 TRYW-CITESTEDVEKVVQVAHDHNLVIIPFGGGT 63 (90)
Q Consensus 30 p~~v-v~P~s~~~v~~vv~~a~~~~i~v~~~G~G~ 63 (90)
++.+ +.|.+.+.....++.+.+.++|++.++...
T Consensus 60 vdgiIi~~~~~~~~~~~~~~~~~~giPvV~~~~~~ 94 (330)
T 3uug_A 60 VKVLVIASIDGTTLSDVLKQAGEQGIKVIAYDRLI 94 (330)
T ss_dssp CSEEEECCSSGGGGHHHHHHHHHTTCEEEEESSCC
T ss_pred CCEEEEEcCCchhHHHHHHHHHHCCCCEEEECCCC
Confidence 5554 456666677888999999999999997643
No 178
>3gon_A Phosphomevalonate kinase; GHMP kinase superfamily, ATP-binding, nucleotide- binding, transferase; HET: PMV ANP; 1.90A {Streptococcus pneumoniae} PDB: 1k47_A
Probab=40.41 E-value=61 Score=21.84 Aligned_cols=54 Identities=9% Similarity=0.039 Sum_probs=32.6
Q ss_pred cchhHHHHHHHHhccCccccceeeecCccEEEEcCCHHHHHHHHHHHHhCCCcE
Q psy4717 3 STEDVEKVVQVAHDHNLVVNHQAIFIGTRYWCITESTEDVEKVVQVAHDHNLVI 56 (90)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~vv~P~s~~~v~~vv~~a~~~~i~v 56 (90)
|+..+|++.+.+.++.....-+.--.+.-.|+...+.++.+++.+...++|+..
T Consensus 270 s~p~ld~l~~~a~~~g~~akltGAG~Ggc~ial~~~~~~~~~i~~~~~~~Gi~~ 323 (335)
T 3gon_A 270 YTPLLRQLKEASQDLQAVAKSSGAGGGDCGIALSFDAQSTKTLKNRWADLGIEL 323 (335)
T ss_dssp CCHHHHHHHHTTTTSSEEEEECTTCSSSEEEEEECSHHHHHHHHHHHHHTTCEE
T ss_pred CCHHHHHHHHHHHhCCcEEEEccccchheEEEEECCHHHHHHHHHHHHHCCCcE
Confidence 566777777766655532110000112445666777788888888888888754
No 179
>3iv7_A Alcohol dehydrogenase IV; NP_602249.1, iron-containing alcohol dehydrogenase, structur genomics, joint center for structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=40.39 E-value=19 Score=25.89 Aligned_cols=28 Identities=29% Similarity=0.534 Sum_probs=23.1
Q ss_pred CHHHHHHHHHHHHhCCCc-EEEEcCCCCC
Q psy4717 38 STEDVEKVVQVAHDHNLV-IIPFGGGTNV 65 (90)
Q Consensus 38 s~~~v~~vv~~a~~~~i~-v~~~G~G~n~ 65 (90)
+.+.|.++++.+++++.. ++.+|||+-+
T Consensus 73 ~~~~v~~~~~~~~~~~~D~IIavGGGs~i 101 (364)
T 3iv7_A 73 PIEVAERARAVATDNEIDLLVCVGGGSTI 101 (364)
T ss_dssp BHHHHHHHHHHHHHTTCCEEEEEESHHHH
T ss_pred CHHHHHHHHHHHHhcCCCEEEEeCCcHHH
Confidence 689999999999998874 7788888754
No 180
>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}
Probab=40.26 E-value=27 Score=24.37 Aligned_cols=21 Identities=19% Similarity=0.532 Sum_probs=18.6
Q ss_pred CHHHHHHHHHHHHhCCCcEEE
Q psy4717 38 STEDVEKVVQVAHDHNLVIIP 58 (90)
Q Consensus 38 s~~~v~~vv~~a~~~~i~v~~ 58 (90)
+.+++.+++++|+++++.++.
T Consensus 200 ~~~~l~~i~~~a~~~~~~li~ 220 (437)
T 3g0t_A 200 TDEELRIIGELATKHDVIVIE 220 (437)
T ss_dssp CHHHHHHHHHHHHHTTCEEEE
T ss_pred CHHHHHHHHHHHHHCCcEEEE
Confidence 467999999999999998876
No 181
>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} SCOP: c.67.1.0
Probab=40.24 E-value=20 Score=24.19 Aligned_cols=22 Identities=23% Similarity=0.264 Sum_probs=18.9
Q ss_pred CHHHHHHHHHHHHhCCCcEEEE
Q psy4717 38 STEDVEKVVQVAHDHNLVIIPF 59 (90)
Q Consensus 38 s~~~v~~vv~~a~~~~i~v~~~ 59 (90)
+.+++.++.++|+++++.++.=
T Consensus 162 ~~~~l~~i~~~~~~~~~~li~D 183 (361)
T 3ftb_A 162 NKEKFIHVLKLAEEKKKTIIID 183 (361)
T ss_dssp CHHHHHHHHHHHHHHTCEEEEE
T ss_pred CHHHHHHHHHHhhhcCCEEEEE
Confidence 4579999999999999988763
No 182
>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} SCOP: c.67.1.0
Probab=40.14 E-value=20 Score=24.40 Aligned_cols=22 Identities=27% Similarity=0.398 Sum_probs=18.6
Q ss_pred CHHHHHHHHHHHHhCCCcEEEE
Q psy4717 38 STEDVEKVVQVAHDHNLVIIPF 59 (90)
Q Consensus 38 s~~~v~~vv~~a~~~~i~v~~~ 59 (90)
+.+++.+++++|+++++.++.=
T Consensus 172 ~~~~l~~i~~~~~~~~~~li~D 193 (376)
T 3ezs_A 172 SLEELISWVKLALKHDFILIND 193 (376)
T ss_dssp CHHHHHHHHHHHHHHTCEEEEE
T ss_pred CHHHHHHHHHHHHHcCcEEEEE
Confidence 4588999999999999887753
No 183
>3lkb_A Probable branched-chain amino acid ABC transporter, amino acid binding protein; branched amino acid, PSI-II, NYSGXRC, structural genomics; 2.40A {Thermus thermophilus}
Probab=40.00 E-value=40 Score=23.12 Aligned_cols=33 Identities=18% Similarity=0.287 Sum_probs=28.6
Q ss_pred CccEEEEcCCHHHHHHHHHHHHhCCCcEEEEcC
Q psy4717 29 GTRYWCITESTEDVEKVVQVAHDHNLVIIPFGG 61 (90)
Q Consensus 29 ~p~~vv~P~s~~~v~~vv~~a~~~~i~v~~~G~ 61 (90)
.|++|+.+.+.++...+++.+++.|+.+-.+|.
T Consensus 198 ~~dav~~~~~~~~a~~~~~~~~~~g~~~~~~~~ 230 (392)
T 3lkb_A 198 GVEYVVHQNVAGPVANILKDAKRLGLKMRHLGA 230 (392)
T ss_dssp TCCEEEEESCHHHHHHHHHHHHHTTCCCEEEEC
T ss_pred CCCEEEEecCcchHHHHHHHHHHcCCCceEEEe
Confidence 489999999999999999999999987666655
No 184
>1jq5_A Glycerol dehydrogenase; oxidoreductase, NAD, glycerol metabolism; HET: NAD; 1.70A {Geobacillus stearothermophilus} SCOP: e.22.1.2 PDB: 1jpu_A* 1jqa_A*
Probab=39.96 E-value=19 Score=25.47 Aligned_cols=27 Identities=30% Similarity=0.628 Sum_probs=20.2
Q ss_pred CHHHHHHHHHHHHhCCCc-EEEEcCCCC
Q psy4717 38 STEDVEKVVQVAHDHNLV-IIPFGGGTN 64 (90)
Q Consensus 38 s~~~v~~vv~~a~~~~i~-v~~~G~G~n 64 (90)
+.+.|.++++.+++++.. ++.+|||+-
T Consensus 71 ~~~~v~~~~~~~~~~~~d~IIavGGGsv 98 (370)
T 1jq5_A 71 SRNEVERIANIARKAEAAIVIGVGGGKT 98 (370)
T ss_dssp BHHHHHHHHHHHHHTTCSEEEEEESHHH
T ss_pred CHHHHHHHHHHHHhcCCCEEEEeCChHH
Confidence 347888888888888875 455888874
No 185
>2ohw_A YUEI protein; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, nysgxrc; 1.40A {Bacillus subtilis} SCOP: d.79.8.1
Probab=39.90 E-value=67 Score=19.98 Aligned_cols=25 Identities=8% Similarity=-0.019 Sum_probs=21.4
Q ss_pred HHHHHHHHHHHHhCCCcEEEEcCCC
Q psy4717 39 TEDVEKVVQVAHDHNLVIIPFGGGT 63 (90)
Q Consensus 39 ~~~v~~vv~~a~~~~i~v~~~G~G~ 63 (90)
-+.+..-++.|+++++|+.....-+
T Consensus 75 ~~~~~~YiklA~~~~i~fTiV~~~~ 99 (133)
T 2ohw_A 75 YQSYSSYIQMASRYGVPFKIVSDLQ 99 (133)
T ss_dssp HHHHHHHHHHHHHTTCCEEEECCCS
T ss_pred HHHHHHHHHHHHHcCCCeEEecCCC
Confidence 4677889999999999999997733
No 186
>3i45_A Twin-arginine translocation pathway signal protei; structural genomics; 1.36A {Rhodospirillum rubrum}
Probab=39.87 E-value=42 Score=22.98 Aligned_cols=36 Identities=14% Similarity=0.007 Sum_probs=30.8
Q ss_pred CccEEEEcCCHHHHHHHHHHHHhCCCcEEEEcCCCC
Q psy4717 29 GTRYWCITESTEDVEKVVQVAHDHNLVIIPFGGGTN 64 (90)
Q Consensus 29 ~p~~vv~P~s~~~v~~vv~~a~~~~i~v~~~G~G~n 64 (90)
+.++|+-|.+......+..+|.+.++|++..+..+.
T Consensus 73 ~v~aiiG~~~s~~~~a~~~~~~~~~ip~i~~~~~~~ 108 (387)
T 3i45_A 73 GVHALAGTFLSHVGLAVSDFARQRKVLFMASEPLTD 108 (387)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHHHTCCEEECSCCCG
T ss_pred CCEEEECCcchHHHHHHHHHHHHcCceEEecCCCch
Confidence 578899999999999999999999999998765543
No 187
>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}
Probab=39.85 E-value=28 Score=23.93 Aligned_cols=22 Identities=9% Similarity=0.163 Sum_probs=18.7
Q ss_pred CHHHHHHHHHHHHhCCCcEEEE
Q psy4717 38 STEDVEKVVQVAHDHNLVIIPF 59 (90)
Q Consensus 38 s~~~v~~vv~~a~~~~i~v~~~ 59 (90)
+.+++.+++++|+++++.++.=
T Consensus 179 ~~~~l~~l~~~~~~~~~~li~D 200 (391)
T 3h14_A 179 DHAAMGALIEAAQAQGASFISD 200 (391)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEE
T ss_pred CHHHHHHHHHHHHHcCCEEEEE
Confidence 4578999999999999987763
No 188
>3h75_A Periplasmic sugar-binding domain protein; protein structure initiative II (PSI II), sugar binding PROT alpha/beta fold; 1.60A {Pseudomonas fluorescens pf-5}
Probab=39.76 E-value=24 Score=23.96 Aligned_cols=36 Identities=3% Similarity=0.149 Sum_probs=27.6
Q ss_pred CccEEEEcCCHHHHHHHHHHHHhCCCcEEEEcCCCC
Q psy4717 29 GTRYWCITESTEDVEKVVQVAHDHNLVIIPFGGGTN 64 (90)
Q Consensus 29 ~p~~vv~P~s~~~v~~vv~~a~~~~i~v~~~G~G~n 64 (90)
+++.++...+......+++.+.+.++|++.++....
T Consensus 62 ~vDgiIi~~~~~~~~~~~~~~~~~giPvV~~~~~~~ 97 (350)
T 3h75_A 62 KPDYLMLVNEQYVAPQILRLSQGSGIKLFIVNSPLT 97 (350)
T ss_dssp CCSEEEEECCSSHHHHHHHHHTTSCCEEEEEESCCC
T ss_pred CCCEEEEeCchhhHHHHHHHHHhCCCcEEEEcCCCC
Confidence 577666554555677889999999999999987543
No 189
>3m05_A Uncharacterized protein PEPE_1480; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics; 3.15A {Pediococcus pentosaceus}
Probab=39.34 E-value=12 Score=23.04 Aligned_cols=32 Identities=6% Similarity=-0.040 Sum_probs=19.3
Q ss_pred ccEEEEcCCHHHHHHHHHHHHhCCCcEEEEcC
Q psy4717 30 TRYWCITESTEDVEKVVQVAHDHNLVIIPFGG 61 (90)
Q Consensus 30 p~~vv~P~s~~~v~~vv~~a~~~~i~v~~~G~ 61 (90)
-.++++|...++|.++|.-+.=.+..+...||
T Consensus 9 I~AIIrp~kld~V~~AL~~~G~~~t~v~~~gG 40 (114)
T 3m05_A 9 VIAIVQDKDANYLSDQFIDQNVRATKLSTTGG 40 (114)
T ss_dssp EEEEEEHHHHHHHHHHHHHTTCCEEEEEEEET
T ss_pred EEEEECHHHHHHHHHHHHHCCCCEEEEEEecc
Confidence 35788887777777777644333344444444
No 190
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=39.20 E-value=38 Score=23.80 Aligned_cols=37 Identities=16% Similarity=0.238 Sum_probs=27.2
Q ss_pred cCccEEEEcCCHHHHHHHHHHHHhCCCcEEEEcCCCCCC
Q psy4717 28 IGTRYWCITESTEDVEKVVQVAHDHNLVIIPFGGGTNVT 66 (90)
Q Consensus 28 ~~p~~vv~P~s~~~v~~vv~~a~~~~i~v~~~G~G~n~~ 66 (90)
.++++++.+.-.+++.+ +++.+-.+|++-+|.|....
T Consensus 173 AGA~~ivlE~vp~~~a~--~it~~l~iP~igIGaG~~~d 209 (275)
T 1o66_A 173 AGAAVVLMECVLAELAK--KVTETVSCPTIGIGAGADCD 209 (275)
T ss_dssp TTCSEEEEESCCHHHHH--HHHHHCSSCEEEESSCSCSS
T ss_pred cCCcEEEEecCCHHHHH--HHHHhCCCCEEEECCCCCCC
Confidence 45777877665555544 56778889999999998664
No 191
>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A*
Probab=39.20 E-value=29 Score=23.95 Aligned_cols=22 Identities=18% Similarity=0.172 Sum_probs=19.0
Q ss_pred CHHHHHHHHHHHHhCCCcEEEE
Q psy4717 38 STEDVEKVVQVAHDHNLVIIPF 59 (90)
Q Consensus 38 s~~~v~~vv~~a~~~~i~v~~~ 59 (90)
+.+++.+++++|+++++.++.=
T Consensus 193 ~~~~l~~i~~~~~~~~~~li~D 214 (401)
T 7aat_A 193 RQEQWKELASVVKKRNLLAYFD 214 (401)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEE
T ss_pred CHHHHHHHHHHHHhCCcEEEEc
Confidence 6799999999999999877653
No 192
>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*
Probab=39.19 E-value=28 Score=23.73 Aligned_cols=22 Identities=18% Similarity=0.270 Sum_probs=19.1
Q ss_pred CHHHHHHHHHHHHhCCCcEEEE
Q psy4717 38 STEDVEKVVQVAHDHNLVIIPF 59 (90)
Q Consensus 38 s~~~v~~vv~~a~~~~i~v~~~ 59 (90)
+.+++.+++++|+++++.++.=
T Consensus 172 ~~~~l~~i~~la~~~~~~li~D 193 (375)
T 3op7_A 172 DRTYLEELVEIASEVGAYILSD 193 (375)
T ss_dssp CHHHHHHHHHHHHTTTCEEEEE
T ss_pred CHHHHHHHHHHHHHcCCEEEEE
Confidence 5788999999999999988763
No 193
>4hqo_A Sporozoite surface protein 2; malaria, gliding motility, VWA domain, TSR domain, extensibl ribbon, receptor on sporozoite, vaccine target; HET: FUC BGC; 2.19A {Plasmodium vivax} PDB: 4hql_A* 4hqn_A*
Probab=39.06 E-value=47 Score=22.15 Aligned_cols=30 Identities=17% Similarity=0.215 Sum_probs=25.8
Q ss_pred cCCHHHHHHHHHHHHhCCCcEEEEcCCCCC
Q psy4717 36 TESTEDVEKVVQVAHDHNLVIIPFGGGTNV 65 (90)
Q Consensus 36 P~s~~~v~~vv~~a~~~~i~v~~~G~G~n~ 65 (90)
|.+.+++.+.++.+++.++.++.+|=|...
T Consensus 137 ~~d~~~~~~~a~~l~~~gi~i~~iGiG~~~ 166 (266)
T 4hqo_A 137 PNSKYRALEVANKLKQRNVRLAVIGIGQGI 166 (266)
T ss_dssp CSCHHHHHHHHHHHHHTTCEEEEEECSSSC
T ss_pred CCCchHHHHHHHHHHHCCCEEEEEecCccc
Confidence 446678999999999999999999998854
No 194
>3ipc_A ABC transporter, substrate binding protein (amino; venus flytrap domain, transport protein; 1.30A {Agrobacterium tumefaciens} PDB: 3ip5_A 3ip6_A 3ip7_A 3ip9_A 3ipa_A
Probab=38.95 E-value=55 Score=21.94 Aligned_cols=35 Identities=9% Similarity=0.093 Sum_probs=29.4
Q ss_pred CccEEEEcCCHHHHHHHHHHHHhCCCcEEEEcCCC
Q psy4717 29 GTRYWCITESTEDVEKVVQVAHDHNLVIIPFGGGT 63 (90)
Q Consensus 29 ~p~~vv~P~s~~~v~~vv~~a~~~~i~v~~~G~G~ 63 (90)
+.++|+-|-+......+...+.+.++|++..+..+
T Consensus 69 ~v~~iig~~~s~~~~~~~~~~~~~~ip~v~~~~~~ 103 (356)
T 3ipc_A 69 GVKFVVGHANSGVSIPASEVYAENGILEITPAATN 103 (356)
T ss_dssp TCCEEEECSSHHHHHHHHHHHHTTTCEEEESSCCC
T ss_pred CCcEEEcCCCcHHHHHHHHHHHhCCCeEEecCCCC
Confidence 47888989998889999999999999988765543
No 195
>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}
Probab=38.87 E-value=29 Score=24.35 Aligned_cols=21 Identities=14% Similarity=0.392 Sum_probs=18.5
Q ss_pred CHHHHHHHHHHHHhCCCcEEE
Q psy4717 38 STEDVEKVVQVAHDHNLVIIP 58 (90)
Q Consensus 38 s~~~v~~vv~~a~~~~i~v~~ 58 (90)
+.+++.+++++|+++++.++.
T Consensus 224 ~~~~l~~i~~~a~~~~~~li~ 244 (444)
T 3if2_A 224 TDEEMAHLAEIAKRYDIPLII 244 (444)
T ss_dssp CHHHHHHHHHHHHHTTCCEEE
T ss_pred CHHHHHHHHHHHHHCCCEEEE
Confidence 467899999999999998775
No 196
>2rjo_A Twin-arginine translocation pathway signal protei; PSI-2, NYSGXRC, twin arginine translocation pathway signal P structural genomics; HET: GAL; 2.05A {Burkholderia phytofirmans}
Probab=38.73 E-value=36 Score=22.92 Aligned_cols=33 Identities=6% Similarity=0.030 Sum_probs=25.2
Q ss_pred ccEEE-EcCCHHHHHHHHHHHHhCCCcEEEEcCC
Q psy4717 30 TRYWC-ITESTEDVEKVVQVAHDHNLVIIPFGGG 62 (90)
Q Consensus 30 p~~vv-~P~s~~~v~~vv~~a~~~~i~v~~~G~G 62 (90)
++.++ .|.+.++....++.+.+.++|++.++..
T Consensus 64 vdgiIi~~~~~~~~~~~~~~~~~~~iPvV~~~~~ 97 (332)
T 2rjo_A 64 NLVLNVDPNDSADARVIVEACSKAGAYVTTIWNK 97 (332)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHTCEEEEESCC
T ss_pred CCEEEEeCCCHHHHHHHHHHHHHCCCeEEEECCC
Confidence 66555 4667777777888888889999998754
No 197
>1ea9_C Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A {Bacillus SP} SCOP: b.1.18.2 b.71.1.1 c.1.8.1
Probab=38.59 E-value=24 Score=26.63 Aligned_cols=22 Identities=14% Similarity=0.474 Sum_probs=20.3
Q ss_pred CCHHHHHHHHHHHHhCCCcEEE
Q psy4717 37 ESTEDVEKVVQVAHDHNLVIIP 58 (90)
Q Consensus 37 ~s~~~v~~vv~~a~~~~i~v~~ 58 (90)
.+.+|++++++.|+++||.|+.
T Consensus 216 Gt~~df~~lv~~~H~~Gi~Vil 237 (583)
T 1ea9_C 216 GDKDTLKKLVDLCHERGIRVLL 237 (583)
T ss_dssp CCHHHHHHHHHHHTTTTCEEEE
T ss_pred CCHHHHHHHHHHHHHCCCEEEE
Confidence 4789999999999999999986
No 198
>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*
Probab=38.58 E-value=30 Score=23.69 Aligned_cols=20 Identities=25% Similarity=0.674 Sum_probs=17.9
Q ss_pred HHHHHHHHHHHHhCCCcEEE
Q psy4717 39 TEDVEKVVQVAHDHNLVIIP 58 (90)
Q Consensus 39 ~~~v~~vv~~a~~~~i~v~~ 58 (90)
.+++.+++++|+++++.++.
T Consensus 179 ~~~l~~l~~~~~~~~~~li~ 198 (389)
T 1gd9_A 179 KKDLEEIADFVVEHDLIVIS 198 (389)
T ss_dssp HHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHHcCCEEEE
Confidence 57999999999999988776
No 199
>3ox4_A Alcohol dehydrogenase 2; iron, NAD, oxidoreductase; HET: NAD; 2.00A {Zymomonas mobilis} PDB: 3owo_A*
Probab=38.49 E-value=15 Score=26.36 Aligned_cols=29 Identities=24% Similarity=0.432 Sum_probs=24.5
Q ss_pred CCHHHHHHHHHHHHhCCCc-EEEEcCCCCC
Q psy4717 37 ESTEDVEKVVQVAHDHNLV-IIPFGGGTNV 65 (90)
Q Consensus 37 ~s~~~v~~vv~~a~~~~i~-v~~~G~G~n~ 65 (90)
.+.+.|.++++.+++++.. ++.+|||+-+
T Consensus 72 p~~~~v~~~~~~~~~~~~D~IIavGGGsv~ 101 (383)
T 3ox4_A 72 PTVTAVLEGLKILKDNNSDFVISLGGGSPH 101 (383)
T ss_dssp CBHHHHHHHHHHHHHHTCSEEEEEESHHHH
T ss_pred CCHHHHHHHHHHHHhcCcCEEEEeCCcHHH
Confidence 5789999999999998864 7889999854
No 200
>3bc9_A AMYB, alpha amylase, catalytic region; acarbose, thermostable, halophilic, N domain, starch binding, hydrolase; HET: G6D GLC ACI BGC ACR; 1.35A {Halothermothrix orenii} PDB: 3bcd_A* 3bcf_A
Probab=38.48 E-value=26 Score=26.77 Aligned_cols=22 Identities=9% Similarity=0.353 Sum_probs=20.4
Q ss_pred CCHHHHHHHHHHHHhCCCcEEE
Q psy4717 37 ESTEDVEKVVQVAHDHNLVIIP 58 (90)
Q Consensus 37 ~s~~~v~~vv~~a~~~~i~v~~ 58 (90)
.+.+|++++++.|+++|+.|+.
T Consensus 206 Gt~~dfk~Lv~~aH~~GI~Vil 227 (599)
T 3bc9_A 206 GTKGELENAIDALHNNDIKVYF 227 (599)
T ss_dssp BCHHHHHHHHHHHHHTTCEEEE
T ss_pred CCHHHHHHHHHHHHHCCCEEEE
Confidence 6899999999999999999876
No 201
>3uk1_A Transketolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, thiamine pyrophosphate; 2.15A {Burkholderia thailandensis} PDB: 3upt_A*
Probab=38.45 E-value=33 Score=27.07 Aligned_cols=31 Identities=10% Similarity=-0.194 Sum_probs=26.9
Q ss_pred cEEEEcCCHHHHHHHHHHHHhCCCcEEEEcC
Q psy4717 31 RYWCITESTEDVEKVVQVAHDHNLVIIPFGG 61 (90)
Q Consensus 31 ~~vv~P~s~~~v~~vv~~a~~~~i~v~~~G~ 61 (90)
-.|+.|.+..|+..++++|-+.+-|++.+=.
T Consensus 534 l~V~~Pad~~E~~~~l~~Ai~~~~Pv~ir~~ 564 (711)
T 3uk1_A 534 LDVWRPADTVETAVAWTYAVAHQHPSCLIFS 564 (711)
T ss_dssp CEEECCSSHHHHHHHHHHHHHSSSCEEEECC
T ss_pred CEEEecCCHHHHHHHHHHHHhcCCCEEEEee
Confidence 4689999999999999999998888887643
No 202
>2oqx_A Tryptophanase; lyase, pyridoxal phosphate, tryptophan catabolism; HET: CME EPE; 1.90A {Escherichia coli} SCOP: c.67.1.2 PDB: 2c44_A 2v1p_A* 2v0y_A*
Probab=38.42 E-value=32 Score=24.26 Aligned_cols=22 Identities=9% Similarity=0.203 Sum_probs=19.8
Q ss_pred CHHHHHHHHHHHHhCCCcEEEE
Q psy4717 38 STEDVEKVVQVAHDHNLVIIPF 59 (90)
Q Consensus 38 s~~~v~~vv~~a~~~~i~v~~~ 59 (90)
+.++++++.++|+++++.++.=
T Consensus 202 ~~~~l~~i~~la~~~gi~li~D 223 (467)
T 2oqx_A 202 SLANLKAMYSIAKKYDIPVVMD 223 (467)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEE
T ss_pred CHHHHHHHHHHHHHcCCEEEEE
Confidence 5689999999999999998875
No 203
>3hut_A Putative branched-chain amino acid ABC transporter; extracellular ligand-binding receptor,transport protein; 1.93A {Rhodospirillum rubrum atcc 11170}
Probab=38.39 E-value=34 Score=23.01 Aligned_cols=33 Identities=9% Similarity=0.185 Sum_probs=28.0
Q ss_pred CccEEEEcCCHHHHHHHHHHHHhCCCcEEEEcC
Q psy4717 29 GTRYWCITESTEDVEKVVQVAHDHNLVIIPFGG 61 (90)
Q Consensus 29 ~p~~vv~P~s~~~v~~vv~~a~~~~i~v~~~G~ 61 (90)
.|++|+...+.++...+++.+++.|+.+-.+|.
T Consensus 194 ~~d~i~~~~~~~~a~~~~~~~~~~g~~~p~~~~ 226 (358)
T 3hut_A 194 APQAIYLAMAYEDAAPFLRALRARGSALPVYGS 226 (358)
T ss_dssp CCSEEEEESCHHHHHHHHHHHHHTTCCCCEEEC
T ss_pred CCCEEEEccCchHHHHHHHHHHHcCCCCcEEec
Confidence 489999999999999999999999876555554
No 204
>3nio_A Guanidinobutyrase; PA1421, GBUA, hydrolase; HET: MLY; 2.00A {Pseudomonas aeruginosa} SCOP: c.42.1.0
Probab=38.23 E-value=33 Score=24.08 Aligned_cols=31 Identities=16% Similarity=0.319 Sum_probs=23.5
Q ss_pred HHHHHHHHHHHHhCCCcEEEEcCCCCCCCCc
Q psy4717 39 TEDVEKVVQVAHDHNLVIIPFGGGTNVTGAV 69 (90)
Q Consensus 39 ~~~v~~vv~~a~~~~i~v~~~G~G~n~~~~~ 69 (90)
.+++++.++-+-+.+.-.+.+||+|+++.+.
T Consensus 105 ~~~i~~~v~~~l~~g~~pi~lGGdHsit~~~ 135 (319)
T 3nio_A 105 VRIIEQEYDRILGHGILPLTLGGDHTITLPI 135 (319)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECCCGGGHHHH
T ss_pred HHHHHHHHHHHHHCCCEEEEECCcchhhHHH
Confidence 3556666776677888889999999987554
No 205
>4dz4_A Agmatinase; hydrolase; 1.70A {Burkholderia thailandensis}
Probab=38.15 E-value=23 Score=25.10 Aligned_cols=32 Identities=9% Similarity=0.202 Sum_probs=25.4
Q ss_pred CHHHHHHHHHHHHhCCCcEEEEcCCCCCCCCc
Q psy4717 38 STEDVEKVVQVAHDHNLVIIPFGGGTNVTGAV 69 (90)
Q Consensus 38 s~~~v~~vv~~a~~~~i~v~~~G~G~n~~~~~ 69 (90)
+.+.|++.++-+-+.+.-.+.+||+|+++.+.
T Consensus 114 ~~~~i~~~v~~~l~~g~~pi~lGGdHsit~~~ 145 (324)
T 4dz4_A 114 IKPAIVEHARTILQSDARMLTLGGDHYITYPL 145 (324)
T ss_dssp HHHHHHHHHHHHHTTTCEEEEEESSGGGHHHH
T ss_pred HHHHHHHHHHHHHHCCCEEEEeCCcchhhHHH
Confidence 45677777877778888889999999986554
No 206
>3hut_A Putative branched-chain amino acid ABC transporter; extracellular ligand-binding receptor,transport protein; 1.93A {Rhodospirillum rubrum atcc 11170}
Probab=38.11 E-value=43 Score=22.50 Aligned_cols=36 Identities=3% Similarity=-0.264 Sum_probs=30.1
Q ss_pred cCccEEEEcCCHHHHHHHHHHHHhCCCcEEEEcCCC
Q psy4717 28 IGTRYWCITESTEDVEKVVQVAHDHNLVIIPFGGGT 63 (90)
Q Consensus 28 ~~p~~vv~P~s~~~v~~vv~~a~~~~i~v~~~G~G~ 63 (90)
.+.++|+-|.+......+...+.+.++|++..+..+
T Consensus 71 ~~v~~iig~~~s~~~~~~~~~~~~~~iP~v~~~~~~ 106 (358)
T 3hut_A 71 PRVVGVLGDFSSTVSMAAGSIYGKEGMPQLSPTAAH 106 (358)
T ss_dssp TTEEEEEECSSHHHHHHHHHHHHHHTCCEEESSCCC
T ss_pred CCcEEEEcCCCcHHHHHHHHHHHHCCCcEEecCCCC
Confidence 357889999888888889999999999999876544
No 207
>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii}
Probab=38.08 E-value=58 Score=22.51 Aligned_cols=26 Identities=15% Similarity=-0.029 Sum_probs=16.1
Q ss_pred ccEEEEcCCHHHHHHHHHHHHhCCCc
Q psy4717 30 TRYWCITESTEDVEKVVQVAHDHNLV 55 (90)
Q Consensus 30 p~~vv~P~s~~~v~~vv~~a~~~~i~ 55 (90)
++.++.-...+.+.++++.|.+.|++
T Consensus 71 ~Dv~ii~vp~~~~~~~v~ea~~~Gi~ 96 (294)
T 2yv1_A 71 ANASVIFVPAPFAKDAVFEAIDAGIE 96 (294)
T ss_dssp CCEEEECCCHHHHHHHHHHHHHTTCS
T ss_pred CCEEEEccCHHHHHHHHHHHHHCCCC
Confidence 55555556666666666666666666
No 208
>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus}
Probab=38.02 E-value=31 Score=23.53 Aligned_cols=21 Identities=24% Similarity=0.287 Sum_probs=18.3
Q ss_pred CHHHHHHHHHHHHhCCCcEEE
Q psy4717 38 STEDVEKVVQVAHDHNLVIIP 58 (90)
Q Consensus 38 s~~~v~~vv~~a~~~~i~v~~ 58 (90)
+.+++.+++++|+++++.++.
T Consensus 176 ~~~~l~~l~~~~~~~~~~li~ 196 (376)
T 2dou_A 176 DWGYFEEALGLARKHGLWLIH 196 (376)
T ss_dssp CHHHHHHHHHHHHHTTCEEEE
T ss_pred CHHHHHHHHHHHHHcCCEEEE
Confidence 357999999999999998776
No 209
>2qsw_A Methionine import ATP-binding protein METN 2; ABC transporter, structural genomics, APC87322.1, PSI-2, protein structure initiative; 1.50A {Enterococcus faecalis} SCOP: d.58.18.13
Probab=37.96 E-value=57 Score=18.65 Aligned_cols=30 Identities=3% Similarity=0.038 Sum_probs=24.5
Q ss_pred ccEEEEcCCHHHHHHHHHHHHhCCCcEEEE
Q psy4717 30 TRYWCITESTEDVEKVVQVAHDHNLVIIPF 59 (90)
Q Consensus 30 p~~vv~P~s~~~v~~vv~~a~~~~i~v~~~ 59 (90)
--.+-.+.+.+++.+++++.+++++.+-+.
T Consensus 68 ~L~v~l~G~~~~~~~ai~~L~~~~v~vEvl 97 (100)
T 2qsw_A 68 SLYIQLLGEEQNILAAIEGLRKLRVETEVI 97 (100)
T ss_dssp EEEEEEESCHHHHHHHHHHHHHTTCEEEES
T ss_pred EEEEEEECCHHHHHHHHHHHHHcCCEEEEc
Confidence 344455888899999999999999988776
No 210
>4aee_A Alpha amylase, catalytic region; hydrolase, hyperthermostable, cyclodextrin hydrolase, GH13; 2.28A {Staphylothermus marinus}
Probab=37.80 E-value=30 Score=26.80 Aligned_cols=22 Identities=41% Similarity=0.594 Sum_probs=20.7
Q ss_pred CCHHHHHHHHHHHHhCCCcEEE
Q psy4717 37 ESTEDVEKVVQVAHDHNLVIIP 58 (90)
Q Consensus 37 ~s~~~v~~vv~~a~~~~i~v~~ 58 (90)
.|.+|++++++.|++.||.|+.
T Consensus 309 Gt~~df~~Lv~~aH~~GikVil 330 (696)
T 4aee_A 309 GTMEDFEKLVQVLHSRKIKIVL 330 (696)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEE
T ss_pred CCHHHHHHHHHHHHHCCCEEEE
Confidence 5899999999999999999987
No 211
>3g1w_A Sugar ABC transporter; sugar-binding protein, bacillus halod target 11229F, transport protein, structural genomics; 2.02A {Bacillus halodurans c-125}
Probab=37.74 E-value=20 Score=23.63 Aligned_cols=35 Identities=14% Similarity=0.208 Sum_probs=26.1
Q ss_pred CccEEE-EcCCHHHHHHHHHHHHhCCCcEEEEcCCC
Q psy4717 29 GTRYWC-ITESTEDVEKVVQVAHDHNLVIIPFGGGT 63 (90)
Q Consensus 29 ~p~~vv-~P~s~~~v~~vv~~a~~~~i~v~~~G~G~ 63 (90)
+++.++ .|.+.+.+...++.+.+.++|++.++...
T Consensus 61 ~vdgiIi~~~~~~~~~~~~~~~~~~~iPvV~~~~~~ 96 (305)
T 3g1w_A 61 NPAGIAISAIDPVELTDTINKAVDAGIPIVLFDSGA 96 (305)
T ss_dssp CCSEEEECCSSTTTTHHHHHHHHHTTCCEEEESSCC
T ss_pred CCCEEEEcCCCHHHHHHHHHHHHHCCCcEEEECCCC
Confidence 366555 56666667778888999999999997643
No 212
>3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis}
Probab=37.60 E-value=38 Score=21.21 Aligned_cols=26 Identities=12% Similarity=-0.059 Sum_probs=22.2
Q ss_pred HHHHHHHHHHHHhCCCcEEEEcCCCC
Q psy4717 39 TEDVEKVVQVAHDHNLVIIPFGGGTN 64 (90)
Q Consensus 39 ~~~v~~vv~~a~~~~i~v~~~G~G~n 64 (90)
...+.++++.+++.|+++.+.+++..
T Consensus 94 ~~g~~~~l~~l~~~g~~~~ivS~~~~ 119 (232)
T 3fvv_A 94 TVQAVDVVRGHLAAGDLCALVTATNS 119 (232)
T ss_dssp CHHHHHHHHHHHHTTCEEEEEESSCH
T ss_pred CHHHHHHHHHHHHCCCEEEEEeCCCH
Confidence 35788999999999999999988764
No 213
>3sg0_A Extracellular ligand-binding receptor; structural genomics, PSI-biology; HET: 173; 1.20A {Rhodopseudomonas palustris} PDB: 4dqd_A*
Probab=37.53 E-value=52 Score=22.21 Aligned_cols=36 Identities=6% Similarity=0.020 Sum_probs=30.6
Q ss_pred CccEEEEcCCHHHHHHHHHHHHhCCCcEEEEcCCCC
Q psy4717 29 GTRYWCITESTEDVEKVVQVAHDHNLVIIPFGGGTN 64 (90)
Q Consensus 29 ~p~~vv~P~s~~~v~~vv~~a~~~~i~v~~~G~G~n 64 (90)
+.++|+-|.+......+...+.+.++|++..+..+.
T Consensus 89 ~v~~iig~~~s~~~~~~~~~~~~~~ip~v~~~~~~~ 124 (386)
T 3sg0_A 89 KVDVLIGSSLTPVSLPLIDIAAEAKTPLMTMAAAAI 124 (386)
T ss_dssp CCSEEECCSSHHHHHHHHHHHHHTTCCEEECCCCGG
T ss_pred CceEEECCCCchhHHHHHHHHHhcCCeEEEecCCCc
Confidence 478888898888888999999999999998876553
No 214
>2hjv_A ATP-dependent RNA helicase DBPA; parallel alpha-beta, hydrolase; 1.95A {Bacillus subtilis}
Probab=37.51 E-value=68 Score=19.41 Aligned_cols=34 Identities=15% Similarity=0.167 Sum_probs=29.1
Q ss_pred ccEEEEcCCHHHHHHHHHHHHhCCCcEEEEcCCC
Q psy4717 30 TRYWCITESTEDVEKVVQVAHDHNLVIIPFGGGT 63 (90)
Q Consensus 30 p~~vv~P~s~~~v~~vv~~a~~~~i~v~~~G~G~ 63 (90)
..++++..+.+++..+.+...+.++++..+-|+.
T Consensus 36 ~~~lVF~~~~~~~~~l~~~L~~~~~~~~~~hg~~ 69 (163)
T 2hjv_A 36 DSCIIFCRTKEHVNQLTDELDDLGYPCDKIHGGM 69 (163)
T ss_dssp SSEEEECSSHHHHHHHHHHHHHTTCCEEEECTTS
T ss_pred CcEEEEECCHHHHHHHHHHHHHcCCcEEEEeCCC
Confidence 4688999999999999999999999888887664
No 215
>1iv8_A Maltooligosyl trehalose synthase; beta alpha barrel, intramolecular transglucosylation, isomerase; HET: MLZ MLY; 1.90A {Sulfolobus acidocaldarius} SCOP: b.71.1.1 c.1.8.1
Probab=37.50 E-value=29 Score=27.64 Aligned_cols=22 Identities=23% Similarity=0.412 Sum_probs=20.1
Q ss_pred CCHHHHHHHHHHHHhCCCcEEE
Q psy4717 37 ESTEDVEKVVQVAHDHNLVIIP 58 (90)
Q Consensus 37 ~s~~~v~~vv~~a~~~~i~v~~ 58 (90)
.+.+|++++++.|+++|+.++.
T Consensus 63 Gt~edfk~LV~aaH~~GIkVIl 84 (720)
T 1iv8_A 63 GGEKEYRRLIETAHTIGLGIIQ 84 (720)
T ss_dssp THHHHHHHHHHHHHHTTCEEEE
T ss_pred CCHHHHHHHHHHHHHCCCEEEE
Confidence 5789999999999999999876
No 216
>3aj7_A Oligo-1,6-glucosidase; (beta/alpha)8-barrel, hydrolase; 1.30A {Saccharomyces cerevisiae} PDB: 3a4a_A* 3a47_A 3axi_A* 3axh_A*
Probab=37.41 E-value=31 Score=26.15 Aligned_cols=22 Identities=18% Similarity=0.333 Sum_probs=20.3
Q ss_pred CCHHHHHHHHHHHHhCCCcEEE
Q psy4717 37 ESTEDVEKVVQVAHDHNLVIIP 58 (90)
Q Consensus 37 ~s~~~v~~vv~~a~~~~i~v~~ 58 (90)
.+.+|++++++.|+++||.|+.
T Consensus 85 Gt~~df~~lv~~~h~~Gi~Vil 106 (589)
T 3aj7_A 85 GTNEDCFALIEKTHKLGMKFIT 106 (589)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEE
T ss_pred CCHHHHHHHHHHHHHCCCEEEE
Confidence 6889999999999999999874
No 217
>2ez2_A Beta-tyrosinase, tyrosine phenol-lyase; PLP-dependent enzyme, pyridoxal-5'-phosphate, domain lyase; 1.85A {Citrobacter freundii} PDB: 2ez1_A 2vlf_A* 2vlh_A* 2yct_A* 1tpl_A 2tpl_A* 2ycn_A* 2yhk_A* 2ycp_A* 1c7g_A*
Probab=37.38 E-value=31 Score=24.32 Aligned_cols=22 Identities=14% Similarity=0.229 Sum_probs=19.1
Q ss_pred CHHHHHHHHHHHHhCCCcEEEE
Q psy4717 38 STEDVEKVVQVAHDHNLVIIPF 59 (90)
Q Consensus 38 s~~~v~~vv~~a~~~~i~v~~~ 59 (90)
+.++++++.++|+++++.++.=
T Consensus 193 ~~~~l~~i~~la~~~~i~li~D 214 (456)
T 2ez2_A 193 SMANMRAVRELTEAHGIKVFYD 214 (456)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEE
T ss_pred CHHHHHHHHHHHHHcCCeEEEE
Confidence 5678999999999999988763
No 218
>4eyg_A Twin-arginine translocation pathway signal; PSI-biology, MCSG, midwest center for structural genomics, transporter; HET: VNL; 1.86A {Rhodopseudomonas palustris} PDB: 4ey3_A* 3t0n_A* 4eyk_A*
Probab=37.33 E-value=46 Score=22.40 Aligned_cols=36 Identities=14% Similarity=0.030 Sum_probs=30.7
Q ss_pred CccEEEEcCCHHHHHHHHHHHHhCCCcEEEEcCCCC
Q psy4717 29 GTRYWCITESTEDVEKVVQVAHDHNLVIIPFGGGTN 64 (90)
Q Consensus 29 ~p~~vv~P~s~~~v~~vv~~a~~~~i~v~~~G~G~n 64 (90)
+.++|+-|-+......+...+.+.++|++..+.++.
T Consensus 72 ~v~~iiG~~~s~~~~~~~~~~~~~~ip~i~~~~~~~ 107 (368)
T 4eyg_A 72 KVNVIAGFGITPAALAAAPLATQAKVPEIVMAAGTS 107 (368)
T ss_dssp CCSEEEECSSHHHHHHHHHHHHHHTCCEEESSCCCG
T ss_pred CcEEEECCCccHHHHHHHHHHHhCCceEEeccCCCh
Confidence 578888899889999999999999999998776543
No 219
>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} SCOP: c.67.1.1 PDB: 3tat_A*
Probab=37.23 E-value=32 Score=23.53 Aligned_cols=21 Identities=10% Similarity=0.325 Sum_probs=18.3
Q ss_pred CHHHHHHHHHHHHhCCCcEEE
Q psy4717 38 STEDVEKVVQVAHDHNLVIIP 58 (90)
Q Consensus 38 s~~~v~~vv~~a~~~~i~v~~ 58 (90)
+.+++.+++++|+++++.++.
T Consensus 191 ~~~~l~~l~~~~~~~~~~li~ 211 (397)
T 3fsl_A 191 TNDQWDAVIEILKARELIPFL 211 (397)
T ss_dssp CHHHHHHHHHHHHHTTCEEEE
T ss_pred CHHHHHHHHHHHHhCCEEEEE
Confidence 458999999999999988775
No 220
>3j21_Z 50S ribosomal protein L30E; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=37.22 E-value=51 Score=18.94 Aligned_cols=35 Identities=11% Similarity=0.235 Sum_probs=25.0
Q ss_pred ccEEEEcCC--HHHHHHHHHHHHhCCCcEEEE-cCCCC
Q psy4717 30 TRYWCITES--TEDVEKVVQVAHDHNLVIIPF-GGGTN 64 (90)
Q Consensus 30 p~~vv~P~s--~~~v~~vv~~a~~~~i~v~~~-G~G~n 64 (90)
+..|+..++ .+-+..+..+|.++++|++.+ ++-.-
T Consensus 32 a~lViiA~D~~~~~~~~i~~~c~~~~ip~~~~~~s~~e 69 (99)
T 3j21_Z 32 AKLIIVAKNAPKEIKDDIYYYAKLSDIPVYEFEGTSVE 69 (99)
T ss_dssp CSEEEEECCCCHHHHHHHHHHHHHTTCCEEEECCCSCG
T ss_pred ccEEEEeCCCCHHHHHHHHHHHHHcCCCEEEeCCCHHH
Confidence 556666555 455678888999999998877 54433
No 221
>2gax_A Hypothetical protein ATU0240; MCSG, structural genomics, agrobacterium tumfaciens, hypothe protein, PSI; 1.80A {Agrobacterium tumefaciens str} SCOP: c.131.1.1
Probab=37.21 E-value=37 Score=21.09 Aligned_cols=31 Identities=13% Similarity=0.116 Sum_probs=26.7
Q ss_pred CccEEEEcCCHHHHHHHHHHHHhCCCcEEEEc
Q psy4717 29 GTRYWCITESTEDVEKVVQVAHDHNLVIIPFG 60 (90)
Q Consensus 29 ~p~~vv~P~s~~~v~~vv~~a~~~~i~v~~~G 60 (90)
.|-.|+.-++ +++.++.+-|.+.++++.++.
T Consensus 56 ~p~~VL~a~~-~~L~~l~~~a~~~~l~~~~f~ 86 (135)
T 2gax_A 56 QPIVVMATDQ-EALRKIHQRSLERDITTSLYI 86 (135)
T ss_dssp SCEEEEEECH-HHHHHHHHHHHHTTCCCEEEE
T ss_pred CcEEEEEECH-HHHHHHHHHHHHCCCcEEecc
Confidence 3887778777 999999999999999988774
No 222
>2aif_A Ribosomal protein L7A; high-mobility like protein, transcription factor, structural genomics, structural genomics consortium, SGC; 1.90A {Cryptosporidium parvum} SCOP: d.79.3.1
Probab=37.15 E-value=26 Score=21.70 Aligned_cols=32 Identities=13% Similarity=0.120 Sum_probs=26.3
Q ss_pred ccEEEEcCCHHH--H-HHHHHHHHhCCCcEEEEcC
Q psy4717 30 TRYWCITESTED--V-EKVVQVAHDHNLVIIPFGG 61 (90)
Q Consensus 30 p~~vv~P~s~~~--v-~~vv~~a~~~~i~v~~~G~ 61 (90)
+..|+..++.++ + ..+..+|.++++|++..++
T Consensus 58 aklViiA~D~~~~~~~~~l~~lc~~~~IP~~~v~s 92 (135)
T 2aif_A 58 AEIVLLAADAEPLEILLHLPLVCEDKNTPYVFVRS 92 (135)
T ss_dssp EEEEEEETTCSCHHHHHHHHHHHHHTTCCEEEESC
T ss_pred CeEEEEecCCChHHHHhHHHHHHHhcCCcEEEECC
Confidence 788888887644 3 8899999999999988755
No 223
>3kax_A Aminotransferase, classes I and II; PLP, C-S lyase, transf structural genomics, center for structural genomics of INFE diseases, csgid; HET: LLP MSE PLP; 1.70A {Bacillus anthracis str} PDB: 3t32_A*
Probab=37.09 E-value=24 Score=23.96 Aligned_cols=22 Identities=14% Similarity=0.321 Sum_probs=18.9
Q ss_pred CHHHHHHHHHHHHhCCCcEEEE
Q psy4717 38 STEDVEKVVQVAHDHNLVIIPF 59 (90)
Q Consensus 38 s~~~v~~vv~~a~~~~i~v~~~ 59 (90)
+.+++++++++|+++++.++.=
T Consensus 174 ~~~~l~~l~~~~~~~~~~li~D 195 (383)
T 3kax_A 174 KKEELTKLGSLCTKYNVIVVAD 195 (383)
T ss_dssp CHHHHHHHHHHHHHHTCEEEEE
T ss_pred CHHHHHHHHHHHHHCCCEEEEE
Confidence 4589999999999999988763
No 224
>3jyw_G 60S ribosomal protein L8(A); eukaryotic ribosome, RACK1 protein, flexible fitting; 8.90A {Thermomyces lanuginosus} PDB: 1s1i_G
Probab=37.05 E-value=11 Score=22.91 Aligned_cols=35 Identities=6% Similarity=0.073 Sum_probs=27.7
Q ss_pred ccEEEEcCCHHH--H-HHHHHHHHhCCCcEEEEcCCCC
Q psy4717 30 TRYWCITESTED--V-EKVVQVAHDHNLVIIPFGGGTN 64 (90)
Q Consensus 30 p~~vv~P~s~~~--v-~~vv~~a~~~~i~v~~~G~G~n 64 (90)
+..|+..++++. + ..+-.+|+++++|+...++-.-
T Consensus 42 a~LVvIA~D~~p~~i~~~l~~lC~~~~VP~~~v~sk~~ 79 (113)
T 3jyw_G 42 AKLVLIANDVDPIELVVFLPALCKKMGVPYAIVKGKAR 79 (113)
T ss_dssp CSEEEECSCCSSHHHHTTHHHHHHHTTCCCEECSCSTT
T ss_pred ceEEEEeCCCCHHHHHHHHHHHHHHcCCCEEEECCHHH
Confidence 888999988754 3 4577899999999998876443
No 225
>2xzm_U Ribosomal protein L7AE containing protein; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_U
Probab=37.01 E-value=42 Score=20.55 Aligned_cols=32 Identities=13% Similarity=0.356 Sum_probs=26.0
Q ss_pred ccEEEEcCCHH--H-HHHHHHHHHhCCCcEEEEcC
Q psy4717 30 TRYWCITESTE--D-VEKVVQVAHDHNLVIIPFGG 61 (90)
Q Consensus 30 p~~vv~P~s~~--~-v~~vv~~a~~~~i~v~~~G~ 61 (90)
+..|+...+.+ + +..+-.+|.++++|+...++
T Consensus 41 a~LViiA~D~~p~~~~~~i~~lc~~~~Ip~~~v~s 75 (126)
T 2xzm_U 41 ALFVCVAEDCDQGNYVKLVKALCAKNEIKYVSVPK 75 (126)
T ss_dssp CSEEEEESSCCSTTHHHHHHHHHHHTTCCEEEESC
T ss_pred ceEEEEeCCCChHHHHHHHHHHHHHhCCCEEEECC
Confidence 78888888763 3 46788999999999998875
No 226
>2qrr_A Methionine import ATP-binding protein METN; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; 1.71A {Vibrio parahaemolyticus} SCOP: d.58.18.13
Probab=36.93 E-value=60 Score=18.59 Aligned_cols=31 Identities=10% Similarity=0.132 Sum_probs=24.8
Q ss_pred ccEEEEcCCHHHHHHHHHHHHhCCCcEEEEc
Q psy4717 30 TRYWCITESTEDVEKVVQVAHDHNLVIIPFG 60 (90)
Q Consensus 30 p~~vv~P~s~~~v~~vv~~a~~~~i~v~~~G 60 (90)
--.+-.+.+.+++.+++++.+++++.+-+.|
T Consensus 68 ~L~v~l~G~~~~~~~ai~~L~~~~v~vEvlg 98 (101)
T 2qrr_A 68 MMVAELFGNEQDDSAAIEYLRENNVKVEVLG 98 (101)
T ss_dssp EEEEEEESCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred EEEEEEeCCHHHHHHHHHHHHHcCCEEEEec
Confidence 3444458888999999999999999887763
No 227
>1ax4_A Tryptophanase; tryptophan biosynthesis, tryptophan indole-lyase, pyridoxal 5'-phosphate, monovalent cation binding site; HET: LLP; 2.10A {Proteus vulgaris} SCOP: c.67.1.2
Probab=36.86 E-value=24 Score=24.99 Aligned_cols=23 Identities=17% Similarity=0.410 Sum_probs=19.9
Q ss_pred CHHHHHHHHHHHHhCCCcEEEEc
Q psy4717 38 STEDVEKVVQVAHDHNLVIIPFG 60 (90)
Q Consensus 38 s~~~v~~vv~~a~~~~i~v~~~G 60 (90)
+.++++++.++|+++++.++.=+
T Consensus 202 ~~~~l~~i~~la~~~gi~li~De 224 (467)
T 1ax4_A 202 SMSNLKEVYEIAKQHGIFVVMDS 224 (467)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEEC
T ss_pred ChhHHHHHHHHHHHcCCEEEEEc
Confidence 46899999999999999988753
No 228
>3ghf_A Septum site-determining protein MINC; structural genomics, cell division, cell cycle, septation, PSI-2, protein structure initiative; HET: CIT; 2.20A {Salmonella typhimurium LT2}
Probab=36.77 E-value=11 Score=22.98 Aligned_cols=26 Identities=19% Similarity=0.247 Sum_probs=20.4
Q ss_pred CHHHHHHHHHHHHhCCCcEEEEcCCC
Q psy4717 38 STEDVEKVVQVAHDHNLVIIPFGGGT 63 (90)
Q Consensus 38 s~~~v~~vv~~a~~~~i~v~~~G~G~ 63 (90)
+..|+.++++.++++|+.++-+-|+.
T Consensus 59 ~~~dl~~L~~~l~~~gl~~vGV~g~~ 84 (120)
T 3ghf_A 59 SPVNWPELHKIVTSTGLRIIGVSGCK 84 (120)
T ss_dssp SSCCHHHHHHHHHTTTCEEEEEESCC
T ss_pred ChHHHHHHHHHHHHcCCEEEEEeCCC
Confidence 34689999999999998766665554
No 229
>2x5n_A SPRPN10, 26S proteasome regulatory subunit RPN10; nuclear protein, nucleus, ubiquitin; 1.30A {Schizosaccharomyces pombe}
Probab=36.75 E-value=30 Score=22.34 Aligned_cols=29 Identities=14% Similarity=0.147 Sum_probs=24.5
Q ss_pred CCHHHHHHHHHHHHhCCCcEEEEcCCCCC
Q psy4717 37 ESTEDVEKVVQVAHDHNLVIIPFGGGTNV 65 (90)
Q Consensus 37 ~s~~~v~~vv~~a~~~~i~v~~~G~G~n~ 65 (90)
.+.+++.++.+.+++.++.+.++|=|+.-
T Consensus 119 ~~~~~~~~~a~~lk~~gi~v~~Ig~G~~~ 147 (192)
T 2x5n_A 119 EDEKNLIRLAKRMKKNNVAIDIIHIGELQ 147 (192)
T ss_dssp SCHHHHHHHHHHHHHTTEEEEEEEESCC-
T ss_pred CCchhHHHHHHHHHHCCCEEEEEEeCCCC
Confidence 35789999999999999999998888753
No 230
>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491}
Probab=36.75 E-value=25 Score=24.14 Aligned_cols=21 Identities=10% Similarity=0.249 Sum_probs=18.1
Q ss_pred CHHHHHHHHHHHHhCCCcEEE
Q psy4717 38 STEDVEKVVQVAHDHNLVIIP 58 (90)
Q Consensus 38 s~~~v~~vv~~a~~~~i~v~~ 58 (90)
+.+++.+++++|+++++.++.
T Consensus 186 ~~~~l~~i~~~~~~~~~~li~ 206 (396)
T 3jtx_A 186 DLDGWKEVFDLQDKYGFIIAS 206 (396)
T ss_dssp CHHHHHHHHHHHHHHCCEEEE
T ss_pred CHHHHHHHHHHHHHcCCEEEE
Confidence 357899999999999988775
No 231
>4eu1_A Mitochondrial aspartate aminotransferase; ssgcid, structural genomics, SEA structural genomics center for infectious disease; HET: LLP; 2.30A {Trypanosoma brucei}
Probab=36.71 E-value=33 Score=23.81 Aligned_cols=21 Identities=19% Similarity=0.276 Sum_probs=18.5
Q ss_pred CHHHHHHHHHHHHhCCCcEEE
Q psy4717 38 STEDVEKVVQVAHDHNLVIIP 58 (90)
Q Consensus 38 s~~~v~~vv~~a~~~~i~v~~ 58 (90)
+.+++.+++++|+++++.++.
T Consensus 201 ~~~~l~~i~~~~~~~~~~li~ 221 (409)
T 4eu1_A 201 THDDWRQVCDVIKRRNHIPFV 221 (409)
T ss_dssp CHHHHHHHHHHHHHTTCEEEE
T ss_pred CHHHHHHHHHHHHhCCcEEEE
Confidence 468999999999999988776
No 232
>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*
Probab=36.66 E-value=32 Score=23.59 Aligned_cols=21 Identities=10% Similarity=0.404 Sum_probs=18.4
Q ss_pred CHHHHHHHHHHHHhCCCcEEE
Q psy4717 38 STEDVEKVVQVAHDHNLVIIP 58 (90)
Q Consensus 38 s~~~v~~vv~~a~~~~i~v~~ 58 (90)
+.+++++++++|+++++.++.
T Consensus 182 ~~~~l~~i~~~~~~~~~~li~ 202 (399)
T 1c7n_A 182 KKDELQKIKDIVLKSDLMLWS 202 (399)
T ss_dssp CHHHHHHHHHHHHHSSCEEEE
T ss_pred CHHHHHHHHHHHHHcCCEEEE
Confidence 358999999999999998776
No 233
>3lhl_A Putative agmatinase; protein structure initiative II(PSI II), nysgxrc structural genomics, NEW YORK SGX research center for struc genomics; 2.30A {Clostridium difficile}
Probab=36.58 E-value=34 Score=23.64 Aligned_cols=31 Identities=16% Similarity=0.074 Sum_probs=23.8
Q ss_pred HHHHHHHHHHHHhCCCcEEEEcCCCCCCCCc
Q psy4717 39 TEDVEKVVQVAHDHNLVIIPFGGGTNVTGAV 69 (90)
Q Consensus 39 ~~~v~~vv~~a~~~~i~v~~~G~G~n~~~~~ 69 (90)
.+++++.++.+-+.+.-.+.+||.|+++.+.
T Consensus 74 ~~~i~~~v~~~l~~g~~pi~lGGdHsit~~~ 104 (287)
T 3lhl_A 74 LKEIYQETYKIVRDSKVPFMIGGEHLVTLPA 104 (287)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEESSGGGHHHH
T ss_pred HHHHHHHHHHHHhCCCeEEEeCCcchhhHHH
Confidence 4566777777777888888999999986544
No 234
>3bzy_B ESCU; auto cleavage protein, flagella, intein, T3SS, membrane, membrane protein, protein transport; 1.20A {Escherichia coli} SCOP: d.367.1.1 PDB: 3c00_B 3bzl_C 3bzo_B 3bzv_B 3c03_C 3bzz_B 3bzx_B
Probab=36.46 E-value=26 Score=20.15 Aligned_cols=27 Identities=7% Similarity=0.078 Sum_probs=18.9
Q ss_pred ccEEEEcCCHHHHHHHHHHHHhCCCcEE
Q psy4717 30 TRYWCITESTEDVEKVVQVAHDHNLVII 57 (90)
Q Consensus 30 p~~vv~P~s~~~v~~vv~~a~~~~i~v~ 57 (90)
|.++..- .-+-..++.+.|+++|+|+.
T Consensus 18 P~VvAKG-~~~~A~~I~~~A~e~~VPi~ 44 (83)
T 3bzy_B 18 PLVIETG-KDAKALQIIKLAELYDIPVI 44 (83)
T ss_dssp CEEEEEE-ETHHHHHHHHHHHHTTCCEE
T ss_pred CEEEEEe-CcHHHHHHHHHHHHcCCCEE
Confidence 5444433 33455789999999999986
No 235
>3gi1_A LBP, laminin-binding protein of group A streptococci; zinc-binding receptor, metal-binding, helical backbone, alpha/beta domains; 2.45A {Streptococcus pyogenes} PDB: 3hjt_A
Probab=36.43 E-value=38 Score=23.31 Aligned_cols=29 Identities=14% Similarity=0.182 Sum_probs=24.2
Q ss_pred cCCHHHHHHHHHHHHhCCCcEEEEcCCCC
Q psy4717 36 TESTEDVEKVVQVAHDHNLVIIPFGGGTN 64 (90)
Q Consensus 36 P~s~~~v~~vv~~a~~~~i~v~~~G~G~n 64 (90)
.-|..+++++++.+++++++++..-...+
T Consensus 211 eps~~~l~~l~~~ik~~~v~~if~e~~~~ 239 (286)
T 3gi1_A 211 EPSPRQLKEIQDFVKEYNVKTIFAEDNVN 239 (286)
T ss_dssp -CCHHHHHHHHHHHHHTTCCEEEECTTSC
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEeCCCC
Confidence 35789999999999999999998865544
No 236
>3gbv_A Putative LACI-family transcriptional regulator; NYSGXRC, PSI-II, 11231J, structur genomics, protein structure initiative; 2.20A {Bacteroides fragilis}
Probab=36.30 E-value=19 Score=23.65 Aligned_cols=35 Identities=3% Similarity=-0.073 Sum_probs=25.5
Q ss_pred CccEEE-EcCCHHHHHHHHHHHHhCCCcEEEEcCCC
Q psy4717 29 GTRYWC-ITESTEDVEKVVQVAHDHNLVIIPFGGGT 63 (90)
Q Consensus 29 ~p~~vv-~P~s~~~v~~vv~~a~~~~i~v~~~G~G~ 63 (90)
+++.++ .|.+.+.....++.+.+.++|++.++...
T Consensus 69 ~vdgiii~~~~~~~~~~~~~~~~~~~iPvV~~~~~~ 104 (304)
T 3gbv_A 69 QPDGVMFAPTVPQYTKGFTDALNELGIPYIYIDSQI 104 (304)
T ss_dssp CCSEEEECCSSGGGTHHHHHHHHHHTCCEEEESSCC
T ss_pred CCCEEEECCCChHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 355554 55555567788888889999999998643
No 237
>1jg8_A L-ALLO-threonine aldolase; glycine biosynthesis, pyridoxal-5'- phosphate, calcium binding site, structural genomics, PSI; HET: LLP; 1.80A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1lw4_A* 1lw5_A* 1m6s_A* 2fm1_A*
Probab=36.25 E-value=26 Score=23.57 Aligned_cols=22 Identities=18% Similarity=0.445 Sum_probs=18.7
Q ss_pred HHHHHHHHHHHHhCCCcEEEEc
Q psy4717 39 TEDVEKVVQVAHDHNLVIIPFG 60 (90)
Q Consensus 39 ~~~v~~vv~~a~~~~i~v~~~G 60 (90)
.+++.+++++|+++++.++.=+
T Consensus 152 ~~~l~~i~~~a~~~~~~li~D~ 173 (347)
T 1jg8_A 152 LENIKEICTIAKEHGINVHIDG 173 (347)
T ss_dssp HHHHHHHHHHHHHHTCEEEEEE
T ss_pred HHHHHHHHHHHHHCCCEEEeeh
Confidence 4789999999999999887643
No 238
>3aml_A OS06G0726400 protein; starch-branching, transferase; HET: EPE; 1.70A {Oryza sativa japonica group} PDB: 3amk_A
Probab=36.20 E-value=48 Score=26.21 Aligned_cols=22 Identities=27% Similarity=0.415 Sum_probs=20.1
Q ss_pred CCHHHHHHHHHHHHhCCCcEEE
Q psy4717 37 ESTEDVEKVVQVAHDHNLVIIP 58 (90)
Q Consensus 37 ~s~~~v~~vv~~a~~~~i~v~~ 58 (90)
.+.+|++++++.|+++||.|+.
T Consensus 248 Gt~~df~~lv~~~H~~Gi~Vil 269 (755)
T 3aml_A 248 GTPEDLKYLVDKAHSLGLRVLM 269 (755)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEE
T ss_pred CCHHHHHHHHHHHHHCCCEEEE
Confidence 5789999999999999999875
No 239
>3f2b_A DNA-directed DNA polymerase III alpha chain; DNA polymerase C, DNA polymerase III; HET: DGT; 2.39A {Geobacillus kaustophilus} PDB: 3f2c_A* 3f2d_A*
Probab=36.19 E-value=15 Score=30.46 Aligned_cols=22 Identities=18% Similarity=0.191 Sum_probs=18.7
Q ss_pred HHHHHHHHHhCCCcEEEEcCCC
Q psy4717 42 VEKVVQVAHDHNLVIIPFGGGT 63 (90)
Q Consensus 42 v~~vv~~a~~~~i~v~~~G~G~ 63 (90)
|+++|+||+++|+++-+||++-
T Consensus 462 V~D~V~~A~~~gilvG~RGSaA 483 (1041)
T 3f2b_A 462 SHKLVKKSLDDGYLVGSRGSVG 483 (1041)
T ss_dssp HHHHHHHHHHTTCCCEECGGGG
T ss_pred HHHHHHHHHHCCCcccCcccHH
Confidence 5789999999999999887743
No 240
>3i09_A Periplasmic branched-chain amino acid-binding Pro; type I periplasmic binding protein, structural genomics, JOI for structural genomics; HET: MSE CIT; 1.80A {Burkholderia mallei}
Probab=36.04 E-value=51 Score=22.38 Aligned_cols=36 Identities=22% Similarity=0.287 Sum_probs=30.8
Q ss_pred CccEEEEcCCHHHHHHHHHHHHhCCCcEEEEcCCCC
Q psy4717 29 GTRYWCITESTEDVEKVVQVAHDHNLVIIPFGGGTN 64 (90)
Q Consensus 29 ~p~~vv~P~s~~~v~~vv~~a~~~~i~v~~~G~G~n 64 (90)
+.++|+-|.+......+...+.+.++|++..+.++.
T Consensus 71 ~v~~iiG~~~s~~~~a~~~~~~~~~ip~i~~~~~~~ 106 (375)
T 3i09_A 71 GLDLLVGGTNSATALSMNQVAAEKKKVYINIGAGAD 106 (375)
T ss_dssp CEEEEEECSCHHHHHHHHHHHHHHTCEEEECSCCCG
T ss_pred CCEEEECCCCcHHHHHHHHHHHHcCceEEEeCCCch
Confidence 578889899999999999999999999998766543
No 241
>2jya_A AGR_C_3324P, uncharacterized protein ATU1810; protein with unknown function ATU1810, ontario centre for ST proteomics, OCSP; NMR {Agrobacterium tumefaciens str}
Probab=36.03 E-value=19 Score=21.92 Aligned_cols=18 Identities=11% Similarity=-0.018 Sum_probs=15.1
Q ss_pred HHHHHHHHhCCCcEEEEc
Q psy4717 43 EKVVQVAHDHNLVIIPFG 60 (90)
Q Consensus 43 ~~vv~~a~~~~i~v~~~G 60 (90)
.+++.+|.++|+++.+.-
T Consensus 62 E~AiayAek~G~~y~V~e 79 (106)
T 2jya_A 62 EQAEAYAQRKGIEYRVIL 79 (106)
T ss_dssp HHHHHHHHHHTCEEEECC
T ss_pred HHHHHHHHHcCCEEEEeC
Confidence 467899999999998864
No 242
>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} SCOP: c.67.1.0 PDB: 2zjg_A* 3e2f_A* 3e2z_A*
Probab=35.96 E-value=25 Score=24.20 Aligned_cols=20 Identities=10% Similarity=0.383 Sum_probs=17.7
Q ss_pred HHHHHHHHHHHHhCCCcEEE
Q psy4717 39 TEDVEKVVQVAHDHNLVIIP 58 (90)
Q Consensus 39 ~~~v~~vv~~a~~~~i~v~~ 58 (90)
.+++.+++++|+++++.++.
T Consensus 186 ~~~l~~l~~~~~~~~~~li~ 205 (410)
T 3e2y_A 186 RQELQVIADLCVKHDTLCIS 205 (410)
T ss_dssp HHHHHHHHHHHHHHTCEEEE
T ss_pred HHHHHHHHHHHHHcCcEEEE
Confidence 37999999999999988775
No 243
>3lop_A Substrate binding periplasmic protein; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 1.55A {Ralstonia solanacearum}
Probab=35.87 E-value=54 Score=22.16 Aligned_cols=33 Identities=9% Similarity=0.009 Sum_probs=27.7
Q ss_pred CccEEEEcCCHHHHHHHHHHHHhCCCcEEEEcC
Q psy4717 29 GTRYWCITESTEDVEKVVQVAHDHNLVIIPFGG 61 (90)
Q Consensus 29 ~p~~vv~P~s~~~v~~vv~~a~~~~i~v~~~G~ 61 (90)
.|++|+.+.+.++...+++.+++.|+.+-.+|.
T Consensus 196 ~~d~v~~~~~~~~a~~~~~~~~~~g~~~~~i~~ 228 (364)
T 3lop_A 196 DVQAIFLGATAEPAAQFVRQYRARGGEAQLLGL 228 (364)
T ss_dssp CCSEEEEESCHHHHHHHHHHHHHTTCCCEEEEC
T ss_pred CCCEEEEecCcHHHHHHHHHHHHcCCCCeEEEe
Confidence 489999999999999999999999886555543
No 244
>1usg_A Leucine-specific binding protein; leucine-binding protein, X-RAY crystallography, protein structure, ABC transport systems, transport protein; 1.53A {Escherichia coli} SCOP: c.93.1.1 PDB: 1usi_A* 1usk_A 2lbp_A 1z15_A 1z16_A 1z17_A 1z18_A 2liv_A
Probab=35.65 E-value=45 Score=22.18 Aligned_cols=35 Identities=14% Similarity=0.284 Sum_probs=28.5
Q ss_pred CccEEEEcCCHHHHHHHHHHHHhCCCcEEEEcCCC
Q psy4717 29 GTRYWCITESTEDVEKVVQVAHDHNLVIIPFGGGT 63 (90)
Q Consensus 29 ~p~~vv~P~s~~~v~~vv~~a~~~~i~v~~~G~G~ 63 (90)
+.++|+-|.+......+...+.+.++|++..+..+
T Consensus 69 ~v~~iig~~~s~~~~~~~~~~~~~~ip~v~~~~~~ 103 (346)
T 1usg_A 69 GIKYVIGHLCSSSTQPASDIYEDEGILMISPGATN 103 (346)
T ss_dssp TCCEEECCSSHHHHHHHHHHHHHHTCEEEECCCCC
T ss_pred CCCEEEcCCCcHHHHHHHHHHHHCCCeEEeeCCCC
Confidence 47888888887777888899999999998876543
No 245
>3td9_A Branched chain amino acid ABC transporter, peripl amino acid-binding protein; leucine binding, structural genomics; HET: MSE PHE; 1.90A {Thermotoga maritima}
Probab=35.57 E-value=70 Score=21.55 Aligned_cols=35 Identities=3% Similarity=-0.000 Sum_probs=30.1
Q ss_pred CccEEEEcCCHHHHHHHHHHHHhCCCcEEEEcCCC
Q psy4717 29 GTRYWCITESTEDVEKVVQVAHDHNLVIIPFGGGT 63 (90)
Q Consensus 29 ~p~~vv~P~s~~~v~~vv~~a~~~~i~v~~~G~G~ 63 (90)
+.++|+-|-+......+...+.+.++|++..+..+
T Consensus 81 ~v~~iiG~~~s~~~~~~~~~~~~~~iP~i~~~~~~ 115 (366)
T 3td9_A 81 KVLAIIGEVASAHSLAIAPIAEENKVPMVTPASTN 115 (366)
T ss_dssp CCSEEEECSSHHHHHHHHHHHHHTTCCEEESSCCC
T ss_pred CeEEEEccCCchhHHHHHHHHHhCCCeEEecCCCC
Confidence 37888889999999999999999999999876644
No 246
>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1
Probab=35.54 E-value=68 Score=22.09 Aligned_cols=27 Identities=7% Similarity=-0.092 Sum_probs=18.4
Q ss_pred CccEEEEcCCHHHHHHHHHHHHhCCCc
Q psy4717 29 GTRYWCITESTEDVEKVVQVAHDHNLV 55 (90)
Q Consensus 29 ~p~~vv~P~s~~~v~~vv~~a~~~~i~ 55 (90)
.++.++.-...+.+.++++.|.+.+++
T Consensus 64 ~~Dv~Ii~vp~~~~~~~~~ea~~~Gi~ 90 (288)
T 1oi7_A 64 EVDASIIFVPAPAAADAALEAAHAGIP 90 (288)
T ss_dssp CCSEEEECCCHHHHHHHHHHHHHTTCS
T ss_pred CCCEEEEecCHHHHHHHHHHHHHCCCC
Confidence 356666666667777777777777777
No 247
>2ioy_A Periplasmic sugar-binding protein; ribose binding protein, thermophilic proteins; HET: RIP; 1.90A {Thermoanaerobacter tengcongensis}
Probab=35.47 E-value=23 Score=23.20 Aligned_cols=33 Identities=12% Similarity=0.167 Sum_probs=23.8
Q ss_pred CccEEE-EcCCHHHHHHHHHHHHhCCCcEEEEcC
Q psy4717 29 GTRYWC-ITESTEDVEKVVQVAHDHNLVIIPFGG 61 (90)
Q Consensus 29 ~p~~vv-~P~s~~~v~~vv~~a~~~~i~v~~~G~ 61 (90)
+++.++ .|.+.+++...++.+.+.++|++.++.
T Consensus 57 ~vdgiIi~~~~~~~~~~~~~~~~~~~iPvV~~~~ 90 (283)
T 2ioy_A 57 KVDVLLINPVDSDAVVTAIKEANSKNIPVITIDR 90 (283)
T ss_dssp TCSEEEECCSSTTTTHHHHHHHHHTTCCEEEESS
T ss_pred CCCEEEEeCCchhhhHHHHHHHHHCCCeEEEecC
Confidence 366554 466556556677888899999999875
No 248
>2h4a_A YRAM (HI1655); perplasmic binding protein, lipoprotein; 1.35A {Haemophilus influenzae} PDB: 3ckm_A
Probab=35.41 E-value=43 Score=23.27 Aligned_cols=36 Identities=6% Similarity=-0.012 Sum_probs=29.6
Q ss_pred cCccEEEEcCCHHHHHHHHHHHHhCCCcEEEEcCCC
Q psy4717 28 IGTRYWCITESTEDVEKVVQVAHDHNLVIIPFGGGT 63 (90)
Q Consensus 28 ~~p~~vv~P~s~~~v~~vv~~a~~~~i~v~~~G~G~ 63 (90)
..|++|+.|...+++..+.+.++..+..+-.+|+..
T Consensus 174 ~~pDaV~~~~~~~~~~~i~~~~~~~g~~~pl~~~~~ 209 (325)
T 2h4a_A 174 SNTTALYAVASPTELAEXKGYLTNIVPNLAIYASSR 209 (325)
T ss_dssp TCCCEEEECCCHHHHHHHHHHHTTTCTTCEEEECGG
T ss_pred CCCCEEEEeCCHHHHhhhhhhHhhcCCCCCEEEecc
Confidence 469999999999999999999988777666666543
No 249
>3imk_A Putative molybdenum carrier protein; YP_461806.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE MES PG4 PG6; 1.45A {Syntrophus aciditrophicus SB}
Probab=35.22 E-value=85 Score=20.32 Aligned_cols=32 Identities=6% Similarity=0.135 Sum_probs=28.2
Q ss_pred ccEEEEcCC---HHHHHHHHHHHHhCCCcEEEEcC
Q psy4717 30 TRYWCITES---TEDVEKVVQVAHDHNLVIIPFGG 61 (90)
Q Consensus 30 p~~vv~P~s---~~~v~~vv~~a~~~~i~v~~~G~ 61 (90)
|-.++.+.. .+.+..+.+|..++++.+.-..|
T Consensus 102 P~l~i~l~~~~~~~~~~~v~~wl~~~~i~vLNVAG 136 (158)
T 3imk_A 102 PCLHIDLDRISIEDAATLINSWTVSHHIQVLNIAG 136 (158)
T ss_dssp CEEEEETTTSCHHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred CEEEEecccccccchHHHHHHHHHHCCceEEEecc
Confidence 888898887 89999999999999999887755
No 250
>3kom_A Transketolase; rossmann fold, csgid, transferase, structural genomics, center for structural genomics of infectious DISE; HET: MSE; 1.60A {Francisella tularensis subsp}
Probab=35.18 E-value=42 Score=26.16 Aligned_cols=32 Identities=6% Similarity=-0.214 Sum_probs=26.9
Q ss_pred cEEEEcCCHHHHHHHHHHHHh-CCCcEEEEcCC
Q psy4717 31 RYWCITESTEDVEKVVQVAHD-HNLVIIPFGGG 62 (90)
Q Consensus 31 ~~vv~P~s~~~v~~vv~~a~~-~~i~v~~~G~G 62 (90)
-.|+.|.+..|+..++++|-+ .+-|++.+=..
T Consensus 489 l~V~~Pad~~e~~~~l~~A~~~~~~Pv~ir~~r 521 (663)
T 3kom_A 489 LSVWRPADTIETMIAWKEAVKSKDTPSVMVLTR 521 (663)
T ss_dssp CEEECCCSHHHHHHHHHHHHHCSSCCEEEECCS
T ss_pred cEEEeeCCHHHHHHHHHHHHHhCCCCEEEEccC
Confidence 468999999999999999998 67888776443
No 251
>1gpu_A Transketolase; transferase(ketone residues); HET: THD; 1.86A {Saccharomyces cerevisiae} SCOP: c.36.1.6 c.36.1.10 c.48.1.1 PDB: 1ngs_A* 1trk_A* 1ay0_A* 1tkb_A* 1tka_A* 1tkc_A*
Probab=35.15 E-value=43 Score=26.06 Aligned_cols=32 Identities=6% Similarity=-0.137 Sum_probs=26.7
Q ss_pred cEEEEcCCHHHHHHHHHHHHhC-CCcEEEEcCC
Q psy4717 31 RYWCITESTEDVEKVVQVAHDH-NLVIIPFGGG 62 (90)
Q Consensus 31 ~~vv~P~s~~~v~~vv~~a~~~-~i~v~~~G~G 62 (90)
-.|+.|.+..|+..++++|-+. +-|++.+=..
T Consensus 496 l~V~~Pad~~e~~~~l~~A~~~~~~Pv~i~~~r 528 (680)
T 1gpu_A 496 IQVWRPADGNEVSAAYKNSLESKHTPSIIALSR 528 (680)
T ss_dssp CEEECCCSHHHHHHHHHHHHHCSSCCEEEECCS
T ss_pred CEEEecCCHHHHHHHHHHHHHhCCCcEEEEecC
Confidence 5689999999999999999986 7787776443
No 252
>3eaq_A Heat resistant RNA dependent ATPase; DEAD box RNA helicase, dimer, ATP-binding, helicase, hydrolase, nucleotide-binding; 2.30A {Thermus thermophilus} PDB: 3ear_A 3eas_A
Probab=35.09 E-value=67 Score=20.55 Aligned_cols=34 Identities=15% Similarity=0.121 Sum_probs=28.7
Q ss_pred ccEEEEcCCHHHHHHHHHHHHhCCCcEEEEcCCC
Q psy4717 30 TRYWCITESTEDVEKVVQVAHDHNLVIIPFGGGT 63 (90)
Q Consensus 30 p~~vv~P~s~~~v~~vv~~a~~~~i~v~~~G~G~ 63 (90)
-.++|+..+.+++..+.+...+.++++.++-|+.
T Consensus 32 ~~~lVF~~~~~~~~~l~~~L~~~~~~~~~lhg~~ 65 (212)
T 3eaq_A 32 DRAMVFTRTKAETEEIAQGLLRLGHPAQALHGDL 65 (212)
T ss_dssp SCEEEECSSHHHHHHHHHHHHHHTCCEEEECSSS
T ss_pred CeEEEEeCCHHHHHHHHHHHHHcCCCEEEEECCC
Confidence 4678999999999999999988888888886664
No 253
>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A*
Probab=34.99 E-value=37 Score=23.19 Aligned_cols=20 Identities=25% Similarity=0.612 Sum_probs=17.9
Q ss_pred HHHHHHHHHHHHhCCCcEEE
Q psy4717 39 TEDVEKVVQVAHDHNLVIIP 58 (90)
Q Consensus 39 ~~~v~~vv~~a~~~~i~v~~ 58 (90)
.+++.++.++|+++++.++.
T Consensus 171 ~~~l~~i~~~~~~~~~~li~ 190 (381)
T 1v2d_A 171 ERELEAIARLARAHDLFLIS 190 (381)
T ss_dssp HHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHHcCCEEEE
Confidence 48999999999999998876
No 254
>2gru_A 2-deoxy-scyllo-inosose synthase; aminoglycoside, 2-deoxystreptamine, dehydroquinate synthase, lyase; HET: NAD EXO CAK; 2.15A {Bacillus circulans} PDB: 2d2x_A*
Probab=34.98 E-value=23 Score=25.33 Aligned_cols=28 Identities=21% Similarity=0.299 Sum_probs=22.3
Q ss_pred CHHHHHHHHHHHHhCCC----cEEEEcCCCCC
Q psy4717 38 STEDVEKVVQVAHDHNL----VIIPFGGGTNV 65 (90)
Q Consensus 38 s~~~v~~vv~~a~~~~i----~v~~~G~G~n~ 65 (90)
+.+.+.++++.+.++++ -++.+|||+-.
T Consensus 76 ~~~~v~~~~~~~~~~~~~r~d~iIalGGGsv~ 107 (368)
T 2gru_A 76 TLSTVTNLQERAIALGANRRTAIVAVGGGLTG 107 (368)
T ss_dssp SHHHHHHHHHHHHHTTCCTTEEEEEEESHHHH
T ss_pred CHHHHHHHHHHHHhcCCCCCcEEEEECChHHH
Confidence 77889999999988873 57778998743
No 255
>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1
Probab=34.98 E-value=36 Score=23.63 Aligned_cols=20 Identities=25% Similarity=0.557 Sum_probs=18.0
Q ss_pred HHHHHHHHHHHHhCCCcEEE
Q psy4717 39 TEDVEKVVQVAHDHNLVIIP 58 (90)
Q Consensus 39 ~~~v~~vv~~a~~~~i~v~~ 58 (90)
.+++.++.++|+++++.++.
T Consensus 193 ~~~l~~i~~~~~~~~~~li~ 212 (409)
T 2gb3_A 193 KDEMRYLVEIAERHGLFLIV 212 (409)
T ss_dssp HHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHHcCCEEEE
Confidence 48999999999999998876
No 256
>3n0w_A ABC branched chain amino acid family transporter, periplasmic ligand binding protein...; receptor family ligand binding region; HET: MSE; 1.88A {Burkholderia xenovorans}
Probab=34.92 E-value=61 Score=22.10 Aligned_cols=36 Identities=6% Similarity=0.039 Sum_probs=30.9
Q ss_pred CccEEEEcCCHHHHHHHHHHHHhCCCcEEEEcCCCC
Q psy4717 29 GTRYWCITESTEDVEKVVQVAHDHNLVIIPFGGGTN 64 (90)
Q Consensus 29 ~p~~vv~P~s~~~v~~vv~~a~~~~i~v~~~G~G~n 64 (90)
+.++|+-|.+......+...+.+.++|++..+..+.
T Consensus 73 ~v~~iiG~~~s~~~~a~~~~~~~~~ip~i~~~~~~~ 108 (379)
T 3n0w_A 73 GVDAIFDVVNSGTALAINNLVKDKKKLAFITAAAAD 108 (379)
T ss_dssp CCCEEEECCCHHHHHHHHHHHHHHTCEEEECSCCCT
T ss_pred CceEEEcCCCcHHHHHHHHHHHHcCceEEEcCCCch
Confidence 578888899999999999999999999998766554
No 257
>3m49_A Transketolase; alpha-beta-alpha sandwich, csgid, transferase, structural genomics, center for structural genomics of infectious diseases; HET: MSE TDP PG5 TRS BTB; 2.00A {Bacillus anthracis} PDB: 3hyl_A*
Probab=34.91 E-value=42 Score=26.37 Aligned_cols=31 Identities=6% Similarity=-0.165 Sum_probs=25.9
Q ss_pred cEEEEcCCHHHHHHHHHHHHhC-CCcEEEEcC
Q psy4717 31 RYWCITESTEDVEKVVQVAHDH-NLVIIPFGG 61 (90)
Q Consensus 31 ~~vv~P~s~~~v~~vv~~a~~~-~i~v~~~G~ 61 (90)
-.|+.|.+..|...++++|-+. +-|++.+=.
T Consensus 513 l~V~~Pad~~E~~~~l~~Ai~~~~~Pv~ir~~ 544 (690)
T 3m49_A 513 VSVIRPADGNESVAAWRLALESTNKPTALVLT 544 (690)
T ss_dssp CEEECCSSHHHHHHHHHHHHHCSSSCEEEECC
T ss_pred CEEEeeCCHHHHHHHHHHHHHcCCCCEEEEee
Confidence 3589999999999999999987 568776643
No 258
>3max_A HD2, histone deacetylase 2; class 2, HDAC, foot pocket, hydrolase; HET: LLX NHE; 2.05A {Homo sapiens}
Probab=34.84 E-value=45 Score=24.30 Aligned_cols=27 Identities=30% Similarity=0.528 Sum_probs=21.4
Q ss_pred CHHHHHHHHHHHHhCCCcEEEEcC-CCC
Q psy4717 38 STEDVEKVVQVAHDHNLVIIPFGG-GTN 64 (90)
Q Consensus 38 s~~~v~~vv~~a~~~~i~v~~~G~-G~n 64 (90)
|.+...++++++++.++|++..++ |-+
T Consensus 271 t~~g~~~~~~~~~~~~~p~v~~~eGGY~ 298 (367)
T 3max_A 271 TVKGHAKCVEVVKTFNLPLLMLGGGGYT 298 (367)
T ss_dssp CHHHHHHHHHHHHTTCCCEEEECCCCCS
T ss_pred CHHHHHHHHHHHHhcCCCEEEEeCCCCC
Confidence 568888899999999999877655 555
No 259
>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*
Probab=34.81 E-value=37 Score=23.37 Aligned_cols=20 Identities=20% Similarity=0.492 Sum_probs=17.7
Q ss_pred HHHHHHHHHHHHhCCCcEEE
Q psy4717 39 TEDVEKVVQVAHDHNLVIIP 58 (90)
Q Consensus 39 ~~~v~~vv~~a~~~~i~v~~ 58 (90)
.+++.+++++|+++++.++.
T Consensus 183 ~~~l~~i~~~~~~~~~~li~ 202 (385)
T 1b5p_A 183 KEVLEALARLAVEHDFYLVS 202 (385)
T ss_dssp HHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHHcCCEEEE
Confidence 48999999999999987765
No 260
>2e6k_A Transketolase; structural genomics, NPPSFA, national project protein structural and functional analyses; 2.09A {Thermus thermophilus}
Probab=34.81 E-value=42 Score=25.92 Aligned_cols=33 Identities=6% Similarity=-0.232 Sum_probs=27.4
Q ss_pred cEEEEcCCHHHHHHHHHHHHhC-CCcEEEEcCCC
Q psy4717 31 RYWCITESTEDVEKVVQVAHDH-NLVIIPFGGGT 63 (90)
Q Consensus 31 ~~vv~P~s~~~v~~vv~~a~~~-~i~v~~~G~G~ 63 (90)
-.|+.|.+.+|+..+++.|-+. +-|++++=.-.
T Consensus 483 l~V~~Pad~~E~~~~l~~A~~~~~~Pv~i~~~r~ 516 (651)
T 2e6k_A 483 LFVIRPADAYETFYAWLVALRRKEGPTALVLTRQ 516 (651)
T ss_dssp CEEECCSSHHHHHHHHHHHHHCCSSCEEEECCSS
T ss_pred cEEEecCCHHHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 5689999999999999999996 67887775433
No 261
>3jzd_A Iron-containing alcohol dehydrogenase; YP_298327.1, putative alcohol dehedrogenase, structural GENO joint center for structural genomics; HET: MSE NAD PG4 P6G PGE; 2.10A {Ralstonia eutropha}
Probab=34.72 E-value=19 Score=25.73 Aligned_cols=28 Identities=18% Similarity=0.375 Sum_probs=22.8
Q ss_pred CHHHHHHHHHHHHhCCC-cEEEEcCCCCC
Q psy4717 38 STEDVEKVVQVAHDHNL-VIIPFGGGTNV 65 (90)
Q Consensus 38 s~~~v~~vv~~a~~~~i-~v~~~G~G~n~ 65 (90)
+.+.|.++++.+++++. -++.+|||+-+
T Consensus 74 ~~~~v~~~~~~~~~~~~D~IIavGGGsvi 102 (358)
T 3jzd_A 74 PIESARDATARAREAGADCAVAVGGGSTT 102 (358)
T ss_dssp BHHHHHHHHHHHHHHTCSEEEEEESHHHH
T ss_pred CHHHHHHHHHHhhccCCCEEEEeCCcHHH
Confidence 67899999999998877 47888988754
No 262
>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1
Probab=34.71 E-value=37 Score=23.80 Aligned_cols=21 Identities=29% Similarity=0.442 Sum_probs=18.3
Q ss_pred CHHHHHHHHHHHHhCCCcEEE
Q psy4717 38 STEDVEKVVQVAHDHNLVIIP 58 (90)
Q Consensus 38 s~~~v~~vv~~a~~~~i~v~~ 58 (90)
+.+++++++++|+++++.++.
T Consensus 206 ~~~~l~~l~~~~~~~~~~li~ 226 (425)
T 1vp4_A 206 SLEKRKALVEIAEKYDLFIVE 226 (425)
T ss_dssp CHHHHHHHHHHHHHTTCEEEE
T ss_pred CHHHHHHHHHHHHHcCCEEEE
Confidence 458999999999999998775
No 263
>1yaa_A Aspartate aminotransferase; HET: PLP; 2.05A {Saccharomyces cerevisiae} SCOP: c.67.1.1
Probab=34.69 E-value=37 Score=23.51 Aligned_cols=21 Identities=14% Similarity=0.235 Sum_probs=18.3
Q ss_pred CHHHHHHHHHHHHhCCCcEEE
Q psy4717 38 STEDVEKVVQVAHDHNLVIIP 58 (90)
Q Consensus 38 s~~~v~~vv~~a~~~~i~v~~ 58 (90)
+.+++++++++|+++++.++.
T Consensus 194 ~~~~l~~l~~~~~~~~~~li~ 214 (412)
T 1yaa_A 194 TSEQWVQIVDAIASKNHIALF 214 (412)
T ss_dssp CHHHHHHHHHHHHHTTCEEEE
T ss_pred CHHHHHHHHHHHHHCCCEEEE
Confidence 358999999999999988775
No 264
>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphat external aldimine, chloroplast, pyridox phosphate; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A*
Probab=34.66 E-value=27 Score=24.45 Aligned_cols=21 Identities=19% Similarity=0.415 Sum_probs=18.3
Q ss_pred CHHHHHHHHHHHHhCCCcEEE
Q psy4717 38 STEDVEKVVQVAHDHNLVIIP 58 (90)
Q Consensus 38 s~~~v~~vv~~a~~~~i~v~~ 58 (90)
+.+++.+++++|+++++.++.
T Consensus 216 ~~~~l~~l~~la~~~~~~li~ 236 (432)
T 3ei9_A 216 TREQLTQLVEFAKKNGSIIVY 236 (432)
T ss_dssp CHHHHHHHHHHHHHHTCEEEE
T ss_pred CHHHHHHHHHHHHHcCcEEEE
Confidence 458999999999999988765
No 265
>3czg_A Sucrose hydrolase; (alpha/beta)8-barrel; HET: GLC; 1.80A {Xanthomonas axonopodis PV} PDB: 3cze_A* 3czl_A* 3czk_A* 2wpg_A
Probab=34.63 E-value=36 Score=26.16 Aligned_cols=22 Identities=9% Similarity=0.219 Sum_probs=20.3
Q ss_pred CCHHHHHHHHHHHHhCCCcEEE
Q psy4717 37 ESTEDVEKVVQVAHDHNLVIIP 58 (90)
Q Consensus 37 ~s~~~v~~vv~~a~~~~i~v~~ 58 (90)
.+.+|++++++.|+++||.|+.
T Consensus 153 Gt~~df~~Lv~~aH~~GI~Vil 174 (644)
T 3czg_A 153 GSNDDLVALTSRLREAGISLCA 174 (644)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEE
T ss_pred CCHHHHHHHHHHHHHCCCEEEE
Confidence 6899999999999999999874
No 266
>3niq_A 3-guanidinopropionase; GPUA, hydrolase; 2.07A {Pseudomonas aeruginosa} PDB: 3nip_A
Probab=34.60 E-value=38 Score=23.94 Aligned_cols=31 Identities=19% Similarity=0.269 Sum_probs=23.3
Q ss_pred HHHHHHHHHHHHhCCCcEEEEcCCCCCCCCc
Q psy4717 39 TEDVEKVVQVAHDHNLVIIPFGGGTNVTGAV 69 (90)
Q Consensus 39 ~~~v~~vv~~a~~~~i~v~~~G~G~n~~~~~ 69 (90)
.+.|++.++.+-+.+.-.+.+||+|+++.+.
T Consensus 102 ~~~i~~~v~~~l~~g~~pi~lGGdHsit~~~ 132 (326)
T 3niq_A 102 LRRIEGFYRQVHAAGTLPLSVGGDHLVTLPI 132 (326)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEESSGGGHHHH
T ss_pred HHHHHHHHHHHHhCCCEEEEeCCcchhhHHH
Confidence 4556666666677888889999999986544
No 267
>2ord_A Acoat, acetylornithine aminotransferase; TM1785, acetylornithine aminotransferase (EC 2.6.1.11) (ACOA structural genomics; HET: MSE PLP; 1.40A {Thermotoga maritima MSB8} PDB: 2e54_A*
Probab=34.55 E-value=28 Score=24.05 Aligned_cols=20 Identities=10% Similarity=0.227 Sum_probs=18.2
Q ss_pred HHHHHHHHHHHHhCCCcEEE
Q psy4717 39 TEDVEKVVQVAHDHNLVIIP 58 (90)
Q Consensus 39 ~~~v~~vv~~a~~~~i~v~~ 58 (90)
.++++++.++|+++++.++.
T Consensus 203 ~~~l~~l~~l~~~~~~~li~ 222 (397)
T 2ord_A 203 KEFLEEARKLCDEYDALLVF 222 (397)
T ss_dssp HHHHHHHHHHHHHHTCEEEE
T ss_pred HHHHHHHHHHHHHcCCEEEE
Confidence 68999999999999998776
No 268
>3eaf_A ABC transporter, substrate binding protein; PSI2, NYSGXRC, substrate binding P structural genomics, protein structure initiative; 2.00A {Aeropyrum pernix}
Probab=34.43 E-value=45 Score=22.94 Aligned_cols=34 Identities=6% Similarity=-0.002 Sum_probs=28.8
Q ss_pred cCccEEEEcCCHHHHHHHHHHHHhCCCcEEEEcC
Q psy4717 28 IGTRYWCITESTEDVEKVVQVAHDHNLVIIPFGG 61 (90)
Q Consensus 28 ~~p~~vv~P~s~~~v~~vv~~a~~~~i~v~~~G~ 61 (90)
..|++|+...+.++...+++.+++.|+.+-.+|.
T Consensus 198 ~~~dav~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 231 (391)
T 3eaf_A 198 ADPDYVWCGNTISSCSLLGRAMAKVGLDAFLLTN 231 (391)
T ss_dssp TCCSEEEECSCHHHHHHHHHHHHHHTCCCEEEEC
T ss_pred cCCCEEEEecCcHHHHHHHHHHHHCCCCceEEEe
Confidence 3699999999999999999999998886655554
No 269
>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1
Probab=34.38 E-value=32 Score=23.59 Aligned_cols=21 Identities=19% Similarity=0.357 Sum_probs=18.2
Q ss_pred CHHHHHHHHHHHHhCCCcEEE
Q psy4717 38 STEDVEKVVQVAHDHNLVIIP 58 (90)
Q Consensus 38 s~~~v~~vv~~a~~~~i~v~~ 58 (90)
+.+++.+++++|+++++.++.
T Consensus 181 ~~~~l~~i~~~~~~~~~~li~ 201 (386)
T 1u08_A 181 QQADFAALWQAIAGHEIFVIS 201 (386)
T ss_dssp CHHHHHHHHHHHTTSCCEEEE
T ss_pred CHHHHHHHHHHHHHcCcEEEE
Confidence 357999999999999988776
No 270
>2r8o_A Transketolase 1, TK 1; reaction intermediate, calcium, metal-binding, thiamine pyrophosphate, transferase; HET: T5X; 1.47A {Escherichia coli K12} SCOP: c.36.1.6 c.36.1.10 c.48.1.1 PDB: 2r5n_A* 2r8p_A* 1qgd_A*
Probab=34.22 E-value=44 Score=25.94 Aligned_cols=32 Identities=0% Similarity=-0.276 Sum_probs=26.8
Q ss_pred cEEEEcCCHHHHHHHHHHHHhC-CCcEEEEcCC
Q psy4717 31 RYWCITESTEDVEKVVQVAHDH-NLVIIPFGGG 62 (90)
Q Consensus 31 ~~vv~P~s~~~v~~vv~~a~~~-~i~v~~~G~G 62 (90)
-.|+.|.+.+|+..++++|-+. +-|++.+=.-
T Consensus 488 l~V~~Pad~~E~~~~l~~a~~~~~~Pv~i~~~r 520 (669)
T 2r8o_A 488 MSTWRPCDQVESAVAWKYGVERQDGPTALILSR 520 (669)
T ss_dssp CEEECCSSHHHHHHHHHHHHHCSSSCEEEECCS
T ss_pred CEEEecCCHHHHHHHHHHHHHhCCCcEEEEeCC
Confidence 5689999999999999999996 7787776443
No 271
>1g5a_A Amylosucrase; glycosyltransferase, glycoside hydrolase, (beta-alpha)8 barrel; HET: EPE; 1.40A {Neisseria polysaccharea} SCOP: b.71.1.1 c.1.8.1 PDB: 1jg9_A* 1mw1_A* 1mw2_A* 1mw3_A* 3ueq_A* 1jgi_A* 1mvy_A* 1mw0_A* 1s46_A* 1zs2_A*
Probab=34.19 E-value=37 Score=26.04 Aligned_cols=22 Identities=14% Similarity=0.353 Sum_probs=20.3
Q ss_pred CCHHHHHHHHHHHHhCCCcEEE
Q psy4717 37 ESTEDVEKVVQVAHDHNLVIIP 58 (90)
Q Consensus 37 ~s~~~v~~vv~~a~~~~i~v~~ 58 (90)
.+.+|++++++.|+++||.|+.
T Consensus 160 Gt~~d~~~Lv~~ah~~GI~Vil 181 (628)
T 1g5a_A 160 GTIGDLREVIAALHEAGISAVV 181 (628)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEE
T ss_pred CCHHHHHHHHHHHHHCCCEEEE
Confidence 6899999999999999999874
No 272
>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*
Probab=34.11 E-value=28 Score=24.46 Aligned_cols=21 Identities=10% Similarity=0.319 Sum_probs=18.2
Q ss_pred CHHHHHHHHHHHHhCCCcEEE
Q psy4717 38 STEDVEKVVQVAHDHNLVIIP 58 (90)
Q Consensus 38 s~~~v~~vv~~a~~~~i~v~~ 58 (90)
+.+++.+++++|+++++.++.
T Consensus 209 ~~~~l~~l~~~~~~~~~~li~ 229 (435)
T 3piu_A 209 TRNELYLLLSFVEDKGIHLIS 229 (435)
T ss_dssp CHHHHHHHHHHHHHHTCEEEE
T ss_pred CHHHHHHHHHHHHHcCCEEEE
Confidence 458999999999999988775
No 273
>1m7x_A 1,4-alpha-glucan branching enzyme; alpha/beta barrel, beta sandwich, transferase; 2.30A {Escherichia coli} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 3o7y_A* 3o7z_A*
Probab=34.01 E-value=37 Score=25.89 Aligned_cols=23 Identities=22% Similarity=0.296 Sum_probs=20.6
Q ss_pred CCHHHHHHHHHHHHhCCCcEEEE
Q psy4717 37 ESTEDVEKVVQVAHDHNLVIIPF 59 (90)
Q Consensus 37 ~s~~~v~~vv~~a~~~~i~v~~~ 59 (90)
.+.+|++++++.|++.||.|+.=
T Consensus 202 Gt~~~~~~lv~~~H~~Gi~VilD 224 (617)
T 1m7x_A 202 GTRDDFRYFIDAAHAAGLNVILD 224 (617)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEEE
T ss_pred CCHHHHHHHHHHHHHCCCEEEEE
Confidence 56899999999999999998763
No 274
>2prs_A High-affinity zinc uptake system protein ZNUA; protein consists of two (beta/ALFA)4 domains, metal transport; 1.70A {Escherichia coli} PDB: 2osv_A 2ps0_A 2ps3_A 2ps9_A 2ogw_A 2xy4_A* 2xqv_A* 2xh8_A
Probab=33.98 E-value=56 Score=22.25 Aligned_cols=29 Identities=0% Similarity=-0.046 Sum_probs=24.7
Q ss_pred cCCHHHHHHHHHHHHhCCCcEEEEcCCCC
Q psy4717 36 TESTEDVEKVVQVAHDHNLVIIPFGGGTN 64 (90)
Q Consensus 36 P~s~~~v~~vv~~a~~~~i~v~~~G~G~n 64 (90)
.-|..+++++++.+++++++++..-...+
T Consensus 206 eps~~~l~~l~~~ik~~~v~~if~e~~~~ 234 (284)
T 2prs_A 206 QPGAQRLHEIRTQLVEQKATCVFAEPQFR 234 (284)
T ss_dssp CCCHHHHHHHHHHHHHTTCCEEEECTTSC
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEeCCCC
Confidence 46789999999999999999998866543
No 275
>2ale_A SNU13, NHP2/L7AE family protein YEL026W; splicing, RNA, yeast, His-TAG, RNA binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: d.79.3.1 PDB: 1zwz_A 2ozb_A 3siu_A 3siv_A 1e7k_A
Probab=33.89 E-value=15 Score=22.96 Aligned_cols=32 Identities=9% Similarity=0.183 Sum_probs=26.6
Q ss_pred ccEEEEcCCHHH---HHHHHHHHHhCCCcEEEEcC
Q psy4717 30 TRYWCITESTED---VEKVVQVAHDHNLVIIPFGG 61 (90)
Q Consensus 30 p~~vv~P~s~~~---v~~vv~~a~~~~i~v~~~G~ 61 (90)
+..|+...++++ +..+-.+|+++++|+...++
T Consensus 49 akLViiA~D~~p~~~~~~l~~lc~~~~VP~~~v~s 83 (134)
T 2ale_A 49 SEFIIMAADCEPIEILLHLPLLCEDKNVPYVFVPS 83 (134)
T ss_dssp EEEEEEETTCSSGGGGTHHHHHHHHHTCCEEEESC
T ss_pred CeEEEEeCCCCHHHHHHHHHHHHHhcCCCEEEECC
Confidence 788888887755 56788999999999988865
No 276
>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A*
Probab=33.86 E-value=39 Score=23.79 Aligned_cols=21 Identities=24% Similarity=0.409 Sum_probs=18.5
Q ss_pred CHHHHHHHHHHHHhCCCcEEE
Q psy4717 38 STEDVEKVVQVAHDHNLVIIP 58 (90)
Q Consensus 38 s~~~v~~vv~~a~~~~i~v~~ 58 (90)
+.++++++.++|+++++.++.
T Consensus 209 ~~~~l~~i~~~~~~~~~~~i~ 229 (427)
T 3dyd_A 209 SKRHLQKILAVAARQCVPILA 229 (427)
T ss_dssp CHHHHHHHHHHHHHTTCCEEE
T ss_pred CHHHHHHHHHHHHHCCCEEEE
Confidence 468899999999999998776
No 277
>3dfe_A Putative PII-like signaling protein; YP_323533.1, structur genomics, joint center for structural genomics, JCSG; 2.35A {Anabaena variabilis atcc 29413} SCOP: d.58.5.0
Probab=33.81 E-value=58 Score=19.45 Aligned_cols=30 Identities=10% Similarity=0.040 Sum_probs=26.8
Q ss_pred ccEEEEcCCHHHHHHHHHHHHhCCCcEEEE
Q psy4717 30 TRYWCITESTEDVEKVVQVAHDHNLVIIPF 59 (90)
Q Consensus 30 p~~vv~P~s~~~v~~vv~~a~~~~i~v~~~ 59 (90)
-.+++.|.-.++|.++|+-+--.|+.+...
T Consensus 9 IeaIi~p~kl~~V~~aL~~~Gv~G~TV~~v 38 (111)
T 3dfe_A 9 LVIVTEKVLLKKVAKIIEEAGATGYTVVDT 38 (111)
T ss_dssp EEEEEEGGGHHHHHHHHHHHTCSCCEEEEE
T ss_pred EEEEECHHHHHHHHHHHHHCCCCcEEEEec
Confidence 468999999999999999998899888875
No 278
>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}
Probab=33.76 E-value=29 Score=24.34 Aligned_cols=21 Identities=14% Similarity=0.582 Sum_probs=18.3
Q ss_pred CHHHHHHHHHHHHhCCCcEEE
Q psy4717 38 STEDVEKVVQVAHDHNLVIIP 58 (90)
Q Consensus 38 s~~~v~~vv~~a~~~~i~v~~ 58 (90)
+.++++++.++|+++++.++.
T Consensus 212 ~~~~l~~l~~l~~~~~~~li~ 232 (421)
T 3l8a_A 212 DNDDLIKIAELCKKHGVILVS 232 (421)
T ss_dssp CHHHHHHHHHHHHHHTCEEEE
T ss_pred CHHHHHHHHHHHHHcCCEEEE
Confidence 348899999999999998876
No 279
>2rb4_A ATP-dependent RNA helicase DDX25; rossmann fold, structural genomics, structural consortium, SGC, alternative initiation, ATP-binding, devel protein; 2.80A {Homo sapiens}
Probab=33.76 E-value=82 Score=19.23 Aligned_cols=34 Identities=3% Similarity=-0.008 Sum_probs=29.0
Q ss_pred ccEEEEcCCHHHHHHHHHHHHhCCCcEEEEcCCC
Q psy4717 30 TRYWCITESTEDVEKVVQVAHDHNLVIIPFGGGT 63 (90)
Q Consensus 30 p~~vv~P~s~~~v~~vv~~a~~~~i~v~~~G~G~ 63 (90)
..++|+..+.+.+..+.+...+.++++..+-|+.
T Consensus 35 ~~~lVF~~~~~~~~~l~~~L~~~~~~~~~~~g~~ 68 (175)
T 2rb4_A 35 GQAIIFCQTRRNAKWLTVEMIQDGHQVSLLSGEL 68 (175)
T ss_dssp SEEEEECSCHHHHHHHHHHHHTTTCCEEEECSSC
T ss_pred CCEEEEECCHHHHHHHHHHHHHcCCcEEEEeCCC
Confidence 4688999999999999999999888888887663
No 280
>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*
Probab=33.70 E-value=29 Score=24.06 Aligned_cols=21 Identities=33% Similarity=0.574 Sum_probs=18.2
Q ss_pred CHHHHHHHHHHHHhCCCcEEE
Q psy4717 38 STEDVEKVVQVAHDHNLVIIP 58 (90)
Q Consensus 38 s~~~v~~vv~~a~~~~i~v~~ 58 (90)
+.+++.+++++|+++++.++.
T Consensus 192 ~~~~l~~i~~~~~~~~~~li~ 212 (422)
T 3fvs_A 192 SREELELVASLCQQHDVVCIT 212 (422)
T ss_dssp CHHHHHHHHHHHHHHTCEEEE
T ss_pred CHHHHHHHHHHHHHcCcEEEE
Confidence 457999999999999988775
No 281
>2fvy_A D-galactose-binding periplasmic protein; periplasmic binding protien, hinge, chemotaxis, transport,; HET: BGC; 0.92A {Escherichia coli} SCOP: c.93.1.1 PDB: 1glg_A* 2fw0_A* 2gbp_A* 2qw1_A* 2hph_A* 2ipn_A* 2ipm_A* 2ipl_A* 1gca_A* 1gcg_A 3ga5_A* 3gbp_A*
Probab=33.65 E-value=36 Score=22.31 Aligned_cols=34 Identities=18% Similarity=0.295 Sum_probs=24.3
Q ss_pred CccEEEE-cCCHHHHHHHHHHHHhCCCcEEEEcCC
Q psy4717 29 GTRYWCI-TESTEDVEKVVQVAHDHNLVIIPFGGG 62 (90)
Q Consensus 29 ~p~~vv~-P~s~~~v~~vv~~a~~~~i~v~~~G~G 62 (90)
+++.++. |.+.+.....++.+.+.++|++.++..
T Consensus 59 ~vdgiii~~~~~~~~~~~~~~~~~~~iPvV~~~~~ 93 (309)
T 2fvy_A 59 GVKALAINLVDPAAAGTVIEKARGQNVPVVFFNKE 93 (309)
T ss_dssp TCSEEEECCSSGGGHHHHHHHHHTTTCCEEEESSC
T ss_pred CCCEEEEeCCCcchhHHHHHHHHHCCCcEEEecCC
Confidence 3666554 555555567788888899999998764
No 282
>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis}
Probab=33.64 E-value=39 Score=23.41 Aligned_cols=20 Identities=25% Similarity=0.506 Sum_probs=18.1
Q ss_pred HHHHHHHHHHHHhCCCcEEE
Q psy4717 39 TEDVEKVVQVAHDHNLVIIP 58 (90)
Q Consensus 39 ~~~v~~vv~~a~~~~i~v~~ 58 (90)
.+++.+++++|+++++.++.
T Consensus 179 ~~~l~~i~~~~~~~~~~li~ 198 (411)
T 2o0r_A 179 ATELAAIAEIAVAANLVVIT 198 (411)
T ss_dssp HHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHHcCCEEEE
Confidence 58999999999999998876
No 283
>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1
Probab=33.60 E-value=30 Score=23.11 Aligned_cols=22 Identities=18% Similarity=0.425 Sum_probs=18.3
Q ss_pred HHHHHHHHHHHHhCCCcEEEEc
Q psy4717 39 TEDVEKVVQVAHDHNLVIIPFG 60 (90)
Q Consensus 39 ~~~v~~vv~~a~~~~i~v~~~G 60 (90)
.++++++.++|+++++.++.=.
T Consensus 163 ~~~l~~i~~~~~~~~~~li~De 184 (359)
T 1svv_A 163 KQELEDISASCKEHGLYLFLDG 184 (359)
T ss_dssp HHHHHHHHHHHHHHTCEEEEEC
T ss_pred HHHHHHHHHHHHHhCCEEEEEc
Confidence 5889999999999998776543
No 284
>2h3h_A Sugar ABC transporter, periplasmic sugar-binding protein; glucose binding protein, periplasmic binding protein, GBP; HET: BGC; 1.70A {Thermotoga maritima} PDB: 2qvc_A* 3c6q_B*
Probab=33.59 E-value=26 Score=23.36 Aligned_cols=34 Identities=9% Similarity=0.149 Sum_probs=25.2
Q ss_pred CccEEE-EcCCHHHHHHHHHHHHhCCCcEEEEcCC
Q psy4717 29 GTRYWC-ITESTEDVEKVVQVAHDHNLVIIPFGGG 62 (90)
Q Consensus 29 ~p~~vv-~P~s~~~v~~vv~~a~~~~i~v~~~G~G 62 (90)
+++.++ .|.+.+++...++.+.+.++|++.++..
T Consensus 57 ~vdgiIi~~~~~~~~~~~~~~~~~~~iPvV~~~~~ 91 (313)
T 2h3h_A 57 GVNGIAIAPSDPTAVIPTIKKALEMGIPVVTLDTD 91 (313)
T ss_dssp TCSEEEECCSSTTTTHHHHHHHHHTTCCEEEESSC
T ss_pred CCCEEEEeCCChHHHHHHHHHHHHCCCeEEEeCCC
Confidence 466555 4666666667788888899999998764
No 285
>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae}
Probab=33.53 E-value=39 Score=23.99 Aligned_cols=20 Identities=30% Similarity=0.544 Sum_probs=18.0
Q ss_pred HHHHHHHHHHHHhCCCcEEE
Q psy4717 39 TEDVEKVVQVAHDHNLVIIP 58 (90)
Q Consensus 39 ~~~v~~vv~~a~~~~i~v~~ 58 (90)
.+++.+++++|+++++.++.
T Consensus 220 ~~~l~~i~~l~~~~~~~li~ 239 (447)
T 3b46_A 220 REELTTLGNICVKHNVVIIS 239 (447)
T ss_dssp HHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHHcCcEEEE
Confidence 48999999999999988776
No 286
>4evq_A Putative ABC transporter subunit, substrate-bindi component; structural genomics, PSI-biology, midwest center for structu genomics; HET: MSE PHB; 1.40A {Rhodopseudomonas palustris} PDB: 4evr_A
Probab=33.49 E-value=27 Score=23.65 Aligned_cols=34 Identities=21% Similarity=0.057 Sum_probs=27.9
Q ss_pred CccEEEEcCCHHHHHHHHHHHHhCCCcEEEEcCC
Q psy4717 29 GTRYWCITESTEDVEKVVQVAHDHNLVIIPFGGG 62 (90)
Q Consensus 29 ~p~~vv~P~s~~~v~~vv~~a~~~~i~v~~~G~G 62 (90)
.|++|+...+..+...+++.+++.|+.+..+|.+
T Consensus 206 ~~dai~~~~~~~~a~~~~~~~~~~g~~vp~~~~~ 239 (375)
T 4evq_A 206 KPDCVYAFFSGGGALKFIKDYAAANLGIPLWGPG 239 (375)
T ss_dssp CCSEEEEECCTHHHHHHHHHHHHTTCCCCEEEEG
T ss_pred CCCEEEEecCcchHHHHHHHHHHcCCCceEEecC
Confidence 4899999888899999999999999765555554
No 287
>3v7q_A Probable ribosomal protein YLXQ; L7AE superfamily, K-turn binding, K-turn RNA, hypothetical R protein, RNA binding protein; HET: CIT; 1.55A {Bacillus subtilis}
Probab=33.47 E-value=64 Score=18.66 Aligned_cols=33 Identities=12% Similarity=0.103 Sum_probs=26.1
Q ss_pred CccEEEEcCCH--HHHHHHHHHHHhCCCcEEEEcC
Q psy4717 29 GTRYWCITEST--EDVEKVVQVAHDHNLVIIPFGG 61 (90)
Q Consensus 29 ~p~~vv~P~s~--~~v~~vv~~a~~~~i~v~~~G~ 61 (90)
.+..|+..++. .....+..+|..+++|++.+++
T Consensus 35 ka~lViiA~D~~~~~~~~i~~~c~~~~vp~~~~~s 69 (101)
T 3v7q_A 35 RAKLVLLTEDASSNTAKKVTDKCNYYKVPYKKVES 69 (101)
T ss_dssp CCSEEEEETTSCHHHHHHHHHHHHHTTCCEEEESC
T ss_pred ceeEEEEeccccccchhhhcccccccCCCeeeech
Confidence 37788888776 4467778889999999999854
No 288
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=33.40 E-value=81 Score=19.15 Aligned_cols=33 Identities=9% Similarity=-0.067 Sum_probs=27.3
Q ss_pred ccEEEEcCCHHHHHHHHHHHHhCCCcEEEEcCC
Q psy4717 30 TRYWCITESTEDVEKVVQVAHDHNLVIIPFGGG 62 (90)
Q Consensus 30 p~~vv~P~s~~~v~~vv~~a~~~~i~v~~~G~G 62 (90)
++.++.....+.+.++++.|.+.|++.+.+-.|
T Consensus 78 vDlvvi~vp~~~~~~vv~~~~~~gi~~i~~~~g 110 (144)
T 2d59_A 78 IEVVDLFVKPKLTMEYVEQAIKKGAKVVWFQYN 110 (144)
T ss_dssp CSEEEECSCHHHHHHHHHHHHHHTCSEEEECTT
T ss_pred CCEEEEEeCHHHHHHHHHHHHHcCCCEEEECCC
Confidence 688888888899999999999999887665544
No 289
>3sho_A Transcriptional regulator, RPIR family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.80A {Sphaerobacter thermophilus}
Probab=33.40 E-value=45 Score=20.64 Aligned_cols=28 Identities=7% Similarity=0.085 Sum_probs=23.3
Q ss_pred EcCCHHHHHHHHHHHHhCCCcEEEEcCC
Q psy4717 35 ITESTEDVEKVVQVAHDHNLVIIPFGGG 62 (90)
Q Consensus 35 ~P~s~~~v~~vv~~a~~~~i~v~~~G~G 62 (90)
......++.++++.|++.|.+++.+.+-
T Consensus 96 ~sG~t~~~~~~~~~ak~~g~~vi~IT~~ 123 (187)
T 3sho_A 96 VWRYLRDTVAALAGAAERGVPTMALTDS 123 (187)
T ss_dssp CSSCCHHHHHHHHHHHHTTCCEEEEESC
T ss_pred CCCCCHHHHHHHHHHHHCCCCEEEEeCC
Confidence 3455688999999999999999998763
No 290
>2v5d_A O-GLCNACASE NAGJ; family 32 carbohydrate binding module, glycosidase, GH84, GH84C, CBM32, hydrolase, coiled coil; 3.30A {Clostridium perfringens}
Probab=33.38 E-value=39 Score=26.66 Aligned_cols=23 Identities=0% Similarity=0.226 Sum_probs=19.7
Q ss_pred cCCHHHHHHHHHHHHhCCCcEEE
Q psy4717 36 TESTEDVEKVVQVAHDHNLVIIP 58 (90)
Q Consensus 36 P~s~~~v~~vv~~a~~~~i~v~~ 58 (90)
+...+|+++++++|++++|.|++
T Consensus 203 ~~~~~~~~elv~ya~~rgI~vv~ 225 (737)
T 2v5d_A 203 ESEMQRMQELINASAENKVDFVF 225 (737)
T ss_dssp CTTHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHHHHHCCCEEEE
Confidence 34467999999999999999983
No 291
>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A*
Probab=33.36 E-value=40 Score=23.67 Aligned_cols=21 Identities=19% Similarity=0.434 Sum_probs=18.4
Q ss_pred CHHHHHHHHHHHHhCCCcEEE
Q psy4717 38 STEDVEKVVQVAHDHNLVIIP 58 (90)
Q Consensus 38 s~~~v~~vv~~a~~~~i~v~~ 58 (90)
+.+++.+++++|+++++.++.
T Consensus 209 ~~~~l~~l~~~a~~~~~~li~ 229 (425)
T 2r2n_A 209 TSERKKEIYELARKYDFLIIE 229 (425)
T ss_dssp CHHHHHHHHHHHHHTTCEEEE
T ss_pred CHHHHHHHHHHHHHcCCEEEE
Confidence 468999999999999987775
No 292
>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}
Probab=33.32 E-value=30 Score=23.75 Aligned_cols=21 Identities=19% Similarity=0.373 Sum_probs=18.4
Q ss_pred CHHHHHHHHHHHHhCCCcEEE
Q psy4717 38 STEDVEKVVQVAHDHNLVIIP 58 (90)
Q Consensus 38 s~~~v~~vv~~a~~~~i~v~~ 58 (90)
+.+++.+++++|+++++.++.
T Consensus 197 ~~~~l~~i~~~~~~~~~~li~ 217 (407)
T 3nra_A 197 SAEEIGQIAALAARYGATVIA 217 (407)
T ss_dssp CHHHHHHHHHHHHHHTCEEEE
T ss_pred CHHHHHHHHHHHHHcCCEEEE
Confidence 467899999999999988776
No 293
>2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix}
Probab=33.22 E-value=46 Score=23.09 Aligned_cols=25 Identities=12% Similarity=-0.071 Sum_probs=11.2
Q ss_pred cEEEEcCCHHHHHHHHHHHHhCCCc
Q psy4717 31 RYWCITESTEDVEKVVQVAHDHNLV 55 (90)
Q Consensus 31 ~~vv~P~s~~~v~~vv~~a~~~~i~ 55 (90)
+.++.-...+.+.++++.|.+.|++
T Consensus 73 DvaIi~vp~~~~~~~v~ea~~~Gi~ 97 (297)
T 2yv2_A 73 NTSIVFVPAPFAPDAVYEAVDAGIR 97 (297)
T ss_dssp CEEEECCCGGGHHHHHHHHHHTTCS
T ss_pred CEEEEecCHHHHHHHHHHHHHCCCC
Confidence 4444444444444444444444444
No 294
>1g8l_A Molybdopterin biosynthesis MOEA protein; molybdenum cofactor biosynthesis, metal binding protein; 1.95A {Escherichia coli} SCOP: b.85.6.1 b.103.1.1 c.57.1.2 PDB: 1fc5_A 1g8r_A 2nqu_A 2nro_A 2nqq_A 2nqk_A 2nqr_A 2nqm_A 2nqs_A 2nrp_A 2nqv_A 2nrs_A 2nqn_A
Probab=33.20 E-value=68 Score=23.47 Aligned_cols=35 Identities=14% Similarity=0.174 Sum_probs=29.2
Q ss_pred cEEEEcCCHHHHHHHHHHHHhCCCcEEEEcCCCCCC
Q psy4717 31 RYWCITESTEDVEKVVQVAHDHNLVIIPFGGGTNVT 66 (90)
Q Consensus 31 ~~vv~P~s~~~v~~vv~~a~~~~i~v~~~G~G~n~~ 66 (90)
...+.|.+.+++.+.++.+.+ +.-+++..||++..
T Consensus 222 ~~~iv~Dd~~~i~~al~~a~~-~~DlvittGG~s~g 256 (411)
T 1g8l_A 222 NLGIIRDDPHALRAAFIEADS-QADVVISSGGVSVG 256 (411)
T ss_dssp EEEEECSCHHHHHHHHHHHHH-HCSEEEECSSSCSS
T ss_pred EEEEeCCCHHHHHHHHHHHhh-cCCEEEECCCCCCC
Confidence 456889999999999987765 56799999999874
No 295
>1itz_A Transketolase; calvin cycle, cofactor, thiamine pyrophosphate, plant, transferase; HET: TPP; 2.30A {Zea mays} SCOP: c.36.1.6 c.36.1.10 c.48.1.1
Probab=32.96 E-value=49 Score=25.73 Aligned_cols=31 Identities=10% Similarity=-0.141 Sum_probs=26.0
Q ss_pred cEEEEcCCHHHHHHHHHHHHhC-CCcEEEEcC
Q psy4717 31 RYWCITESTEDVEKVVQVAHDH-NLVIIPFGG 61 (90)
Q Consensus 31 ~~vv~P~s~~~v~~vv~~a~~~-~i~v~~~G~ 61 (90)
-.|+.|.+.+|+..++++|-+. +-|++.+=.
T Consensus 501 l~V~~Pad~~e~~~~l~~a~~~~~~Pv~i~~~ 532 (675)
T 1itz_A 501 ILMLRPADGNETAGAYKVAVLNRKRPSILALS 532 (675)
T ss_dssp CEEECCCSHHHHHHHHHHHHHCTTSCEEEEEC
T ss_pred eEEEECCCHHHHHHHHHHHHHhCCCcEEEEec
Confidence 5689999999999999999986 778776533
No 296
>1fuk_A Eukaryotic initiation factor 4A; helicase, DEAD-box protein, translation; 1.75A {Saccharomyces cerevisiae} SCOP: c.37.1.19
Probab=32.94 E-value=83 Score=19.01 Aligned_cols=34 Identities=9% Similarity=0.126 Sum_probs=28.8
Q ss_pred ccEEEEcCCHHHHHHHHHHHHhCCCcEEEEcCCC
Q psy4717 30 TRYWCITESTEDVEKVVQVAHDHNLVIIPFGGGT 63 (90)
Q Consensus 30 p~~vv~P~s~~~v~~vv~~a~~~~i~v~~~G~G~ 63 (90)
..++++..+.+++..+.+...+.++++..+-|+.
T Consensus 31 ~~~lVF~~~~~~~~~l~~~L~~~~~~~~~~~~~~ 64 (165)
T 1fuk_A 31 TQAVIFCNTRRKVEELTTKLRNDKFTVSAIYSDL 64 (165)
T ss_dssp SCEEEEESSHHHHHHHHHHHHHTTCCEEEECTTS
T ss_pred CCEEEEECCHHHHHHHHHHHHHcCCCEEEEECCC
Confidence 4678999999999999999999888888887664
No 297
>3jx9_A Putative phosphoheptose isomerase; YP_001815198.1, structura genomics, joint center for structural genomics, JCSG; HET: MSE; 1.95A {Exiguobacterium sibiricum 255-15}
Probab=32.89 E-value=46 Score=21.46 Aligned_cols=29 Identities=14% Similarity=-0.122 Sum_probs=23.1
Q ss_pred CHHHHHHHHHHHHhCCCcEEEEcCCCCCC
Q psy4717 38 STEDVEKVVQVAHDHNLVIIPFGGGTNVT 66 (90)
Q Consensus 38 s~~~v~~vv~~a~~~~i~v~~~G~G~n~~ 66 (90)
..++.++++.-|-..+-.+.++|.||+-.
T Consensus 23 ~I~~AA~llaqai~~~g~IyvfG~Ghs~~ 51 (170)
T 3jx9_A 23 ELFDVVRLLAQALVGQGKVYLDAYGEFEG 51 (170)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEECGGGGG
T ss_pred HHHHHHHHHHHHHhCCCEEEEECCCcHHH
Confidence 35677778877777888999999999753
No 298
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=32.73 E-value=1e+02 Score=19.95 Aligned_cols=20 Identities=10% Similarity=-0.056 Sum_probs=10.0
Q ss_pred HHHHHHHHHHHHhCCCcEEE
Q psy4717 39 TEDVEKVVQVAHDHNLVIIP 58 (90)
Q Consensus 39 ~~~v~~vv~~a~~~~i~v~~ 58 (90)
.+.+.++.+.|.++|+.+..
T Consensus 112 ~~~l~~l~~~a~~~gv~l~l 131 (257)
T 3lmz_A 112 YELLPYVDKKVKEYDFHYAI 131 (257)
T ss_dssp GGGHHHHHHHHHHHTCEEEE
T ss_pred HHHHHHHHHHHHHcCCEEEE
Confidence 34455555555555555444
No 299
>1pq4_A Periplasmic binding protein component of AN ABC T uptake transporter; ZNUA, loop, metal-binding, metal binding protein; 1.90A {Synechocystis SP} SCOP: c.92.2.2 PDB: 2ov3_A 2ov1_A
Probab=32.73 E-value=55 Score=22.49 Aligned_cols=30 Identities=13% Similarity=0.247 Sum_probs=25.2
Q ss_pred EcCCHHHHHHHHHHHHhCCCcEEEEcCCCC
Q psy4717 35 ITESTEDVEKVVQVAHDHNLVIIPFGGGTN 64 (90)
Q Consensus 35 ~P~s~~~v~~vv~~a~~~~i~v~~~G~G~n 64 (90)
..-|..+++++++.+++++++++..-...+
T Consensus 219 ~eps~~~l~~l~~~ik~~~v~~If~e~~~~ 248 (291)
T 1pq4_A 219 QEPSAQELKQLIDTAKENNLTMVFGETQFS 248 (291)
T ss_dssp BCCCHHHHHHHHHHHHTTTCCEEEEETTSC
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEEeCCCC
Confidence 346899999999999999999998765544
No 300
>2dri_A D-ribose-binding protein; sugar transport; HET: RIP; 1.60A {Escherichia coli} SCOP: c.93.1.1 PDB: 1urp_A* 1ba2_A 1dbp_A* 1drj_A* 1drk_A* 2gx6_A*
Probab=32.64 E-value=28 Score=22.65 Aligned_cols=34 Identities=21% Similarity=0.357 Sum_probs=23.7
Q ss_pred CccEEE-EcCCHHHHHHHHHHHHhCCCcEEEEcCC
Q psy4717 29 GTRYWC-ITESTEDVEKVVQVAHDHNLVIIPFGGG 62 (90)
Q Consensus 29 ~p~~vv-~P~s~~~v~~vv~~a~~~~i~v~~~G~G 62 (90)
+++.++ .|.+.+++...++.+.+.++|++.++..
T Consensus 57 ~vdgiIi~~~~~~~~~~~~~~~~~~~iPvV~i~~~ 91 (271)
T 2dri_A 57 GTKILLINPTDSDAVGNAVKMANQANIPVITLDRQ 91 (271)
T ss_dssp TEEEEEECCSSTTTTHHHHHHHHHTTCCEEEESSC
T ss_pred CCCEEEEeCCChHHHHHHHHHHHHCCCcEEEecCC
Confidence 355554 4555555556778888899999999753
No 301
>3rot_A ABC sugar transporter, periplasmic sugar binding; nysgrc, PSI-biology, structural genomics; 1.91A {Legionella pneumophila subsp}
Probab=32.62 E-value=18 Score=23.93 Aligned_cols=35 Identities=17% Similarity=0.081 Sum_probs=26.7
Q ss_pred CccEEE-EcCCHHHHHHHHHHHHhCCCcEEEEcCCC
Q psy4717 29 GTRYWC-ITESTEDVEKVVQVAHDHNLVIIPFGGGT 63 (90)
Q Consensus 29 ~p~~vv-~P~s~~~v~~vv~~a~~~~i~v~~~G~G~ 63 (90)
+++.++ .|.+.+.+...++.+.+.++|++.++...
T Consensus 61 ~vdgiii~~~~~~~~~~~~~~~~~~giPvV~~~~~~ 96 (297)
T 3rot_A 61 YPSGIATTIPSDTAFSKSLQRANKLNIPVIAVDTRP 96 (297)
T ss_dssp CCSEEEECCCCSSTTHHHHHHHHHHTCCEEEESCCC
T ss_pred CCCEEEEeCCCHHHHHHHHHHHHHCCCCEEEEcCCC
Confidence 366555 57777777788889999999999987644
No 302
>3mos_A Transketolase, TK; thiamin diphosphate TPP THDP enzyme catalysis sugar metaboli transferase; HET: TPP; 1.75A {Homo sapiens} PDB: 3ooy_A*
Probab=32.61 E-value=48 Score=25.48 Aligned_cols=29 Identities=14% Similarity=0.017 Sum_probs=25.1
Q ss_pred EEEEcCCHHHHHHHHHHHHhCCCcEEEEc
Q psy4717 32 YWCITESTEDVEKVVQVAHDHNLVIIPFG 60 (90)
Q Consensus 32 ~vv~P~s~~~v~~vv~~a~~~~i~v~~~G 60 (90)
.|+.|.+.+|+..++++|.+.+-|++.+-
T Consensus 442 ~V~~P~d~~e~~~~l~~a~~~~gp~~ir~ 470 (616)
T 3mos_A 442 TVFYPSDGVATEKAVELAANTKGICFIRT 470 (616)
T ss_dssp EEECCCSHHHHHHHHHHHHTCCSEEEEEC
T ss_pred EEEecCCHHHHHHHHHHHHhcCCCEEEEE
Confidence 48899999999999999999888876554
No 303
>4evq_A Putative ABC transporter subunit, substrate-bindi component; structural genomics, PSI-biology, midwest center for structu genomics; HET: MSE PHB; 1.40A {Rhodopseudomonas palustris} PDB: 4evr_A
Probab=32.60 E-value=62 Score=21.81 Aligned_cols=36 Identities=14% Similarity=0.122 Sum_probs=30.7
Q ss_pred CccEEEEcCCHHHHHHHHHHHHhCCCcEEEEcCCCC
Q psy4717 29 GTRYWCITESTEDVEKVVQVAHDHNLVIIPFGGGTN 64 (90)
Q Consensus 29 ~p~~vv~P~s~~~v~~vv~~a~~~~i~v~~~G~G~n 64 (90)
+.+.|+-|.+......+...+.+.++|++..+.++.
T Consensus 82 ~v~~iig~~~s~~~~~~~~~~~~~~iP~v~~~~~~~ 117 (375)
T 4evq_A 82 KADVLIGTVHSGVAMAMVKIAREDGIPTIVPNAGAD 117 (375)
T ss_dssp CCSEEEECSSHHHHHHHHHHHHHHCCCEEESSCCCG
T ss_pred CceEEEcCCccHHHHHHHHHHHHcCceEEecCCCCh
Confidence 588899998888888899999999999998776554
No 304
>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A*
Probab=32.59 E-value=42 Score=23.22 Aligned_cols=21 Identities=19% Similarity=0.483 Sum_probs=18.1
Q ss_pred CHHHHHHHHHHHHhCCCcEEE
Q psy4717 38 STEDVEKVVQVAHDHNLVIIP 58 (90)
Q Consensus 38 s~~~v~~vv~~a~~~~i~v~~ 58 (90)
+.+++++++++|+++++.++.
T Consensus 181 ~~~~l~~l~~~~~~~~~~li~ 201 (400)
T 3asa_A 181 NKDQLRAIVHYAIEHEILILF 201 (400)
T ss_dssp CHHHHHHHHHHHHHTTCEEEE
T ss_pred CHHHHHHHHHHHHHcCCEEEE
Confidence 457999999999999987775
No 305
>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii}
Probab=32.53 E-value=31 Score=24.31 Aligned_cols=21 Identities=10% Similarity=0.319 Sum_probs=18.2
Q ss_pred CHHHHHHHHHHHHhCCCcEEE
Q psy4717 38 STEDVEKVVQVAHDHNLVIIP 58 (90)
Q Consensus 38 s~~~v~~vv~~a~~~~i~v~~ 58 (90)
+.+++++++++|+++++.++.
T Consensus 227 ~~~~l~~l~~l~~~~~~~li~ 247 (449)
T 3qgu_A 227 TRAQLTELVNFARKNGSILVY 247 (449)
T ss_dssp CHHHHHHHHHHHHHHTCEEEE
T ss_pred CHHHHHHHHHHHHHCCcEEEE
Confidence 457999999999999987775
No 306
>3ipc_A ABC transporter, substrate binding protein (amino; venus flytrap domain, transport protein; 1.30A {Agrobacterium tumefaciens} PDB: 3ip5_A 3ip6_A 3ip7_A 3ip9_A 3ipa_A
Probab=32.52 E-value=46 Score=22.33 Aligned_cols=33 Identities=15% Similarity=0.158 Sum_probs=27.6
Q ss_pred CccEEEEcCCHHHHHHHHHHHHhCCCcEEEEcC
Q psy4717 29 GTRYWCITESTEDVEKVVQVAHDHNLVIIPFGG 61 (90)
Q Consensus 29 ~p~~vv~P~s~~~v~~vv~~a~~~~i~v~~~G~ 61 (90)
.|++|+...+.++...+++.+++.|+.+-.+|.
T Consensus 193 ~~d~v~~~~~~~~a~~~~~~~~~~g~~~~~~~~ 225 (356)
T 3ipc_A 193 GVSIIYWGGLHTEAGLIIRQAADQGLKAKLVSG 225 (356)
T ss_dssp TCCEEEEESCHHHHHHHHHHHHHHTCCCEEEEC
T ss_pred CCCEEEEccCchHHHHHHHHHHHCCCCCcEEEe
Confidence 489999899999999999999998887655554
No 307
>3m07_A Putative alpha amylase; IDP00968, csgid, structural genomics, center for structural genomics of infectious diseases, unknown function; HET: BTB PG4 PGE; 1.40A {Salmonella enterica subsp}
Probab=32.47 E-value=41 Score=25.82 Aligned_cols=22 Identities=18% Similarity=0.409 Sum_probs=20.2
Q ss_pred CCHHHHHHHHHHHHhCCCcEEE
Q psy4717 37 ESTEDVEKVVQVAHDHNLVIIP 58 (90)
Q Consensus 37 ~s~~~v~~vv~~a~~~~i~v~~ 58 (90)
.+.+|++++|+.|+++||.|+.
T Consensus 200 G~~~~~~~lv~~~H~~Gi~Vil 221 (618)
T 3m07_A 200 GTPDDFKAFIDAAHGYGLSVVL 221 (618)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEE
T ss_pred CCHHHHHHHHHHHHHCCCEEEE
Confidence 4789999999999999999876
No 308
>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A*
Probab=32.44 E-value=31 Score=24.06 Aligned_cols=21 Identities=14% Similarity=0.371 Sum_probs=18.4
Q ss_pred CHHHHHHHHHHHHhCCCcEEE
Q psy4717 38 STEDVEKVVQVAHDHNLVIIP 58 (90)
Q Consensus 38 s~~~v~~vv~~a~~~~i~v~~ 58 (90)
+.+++.+++++|+++++.++.
T Consensus 200 ~~~~l~~i~~~~~~~~~~li~ 220 (429)
T 1yiz_A 200 DRAELEVVANLCKKWNVLCVS 220 (429)
T ss_dssp CHHHHHHHHHHHHHHTCEEEE
T ss_pred CHHHHHHHHHHHHHcCcEEEE
Confidence 357999999999999998876
No 309
>3ksm_A ABC-type sugar transport system, periplasmic COMP; periplasmic component, PSI- 11023L, structural genomics, protein structure initiative; HET: BDR; 1.90A {Hahella chejuensis}
Probab=32.43 E-value=29 Score=22.35 Aligned_cols=34 Identities=15% Similarity=0.193 Sum_probs=24.8
Q ss_pred ccEEEE-cCCHHHHHHHHHHHHhCCCcEEEEcCCC
Q psy4717 30 TRYWCI-TESTEDVEKVVQVAHDHNLVIIPFGGGT 63 (90)
Q Consensus 30 p~~vv~-P~s~~~v~~vv~~a~~~~i~v~~~G~G~ 63 (90)
++.++. |.+.+.....++.+.+.++|++.++...
T Consensus 60 vdgii~~~~~~~~~~~~~~~~~~~~ipvV~~~~~~ 94 (276)
T 3ksm_A 60 PDALILAPNSAEDLTPSVAQYRARNIPVLVVDSDL 94 (276)
T ss_dssp CSEEEECCSSTTTTHHHHHHHHHTTCCEEEESSCC
T ss_pred CCEEEEeCCCHHHHHHHHHHHHHCCCcEEEEecCC
Confidence 666555 4344556778888899999999997654
No 310
>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus}
Probab=32.39 E-value=34 Score=23.82 Aligned_cols=21 Identities=10% Similarity=0.175 Sum_probs=18.2
Q ss_pred CHHHHHHHHHHHHhCCCcEEE
Q psy4717 38 STEDVEKVVQVAHDHNLVIIP 58 (90)
Q Consensus 38 s~~~v~~vv~~a~~~~i~v~~ 58 (90)
+.+++.+++++|+++++.++.
T Consensus 199 ~~~~l~~l~~~~~~~~~~li~ 219 (404)
T 2o1b_A 199 TKEVFDEAIAKFKGTDTKIVH 219 (404)
T ss_dssp CHHHHHHHHHHHTTSSCEEEE
T ss_pred CHHHHHHHHHHHHHcCCEEEE
Confidence 357999999999999998776
No 311
>1tjy_A Sugar transport protein; protein-ligand complex, signaling protein; HET: PAV; 1.30A {Salmonella typhimurium} SCOP: c.93.1.1 PDB: 1tm2_A 3t95_A* 3ejw_A*
Probab=32.37 E-value=23 Score=23.83 Aligned_cols=34 Identities=12% Similarity=0.161 Sum_probs=25.3
Q ss_pred CccEE-EEcCCHHHHHHHHHHHHhCCCcEEEEcCC
Q psy4717 29 GTRYW-CITESTEDVEKVVQVAHDHNLVIIPFGGG 62 (90)
Q Consensus 29 ~p~~v-v~P~s~~~v~~vv~~a~~~~i~v~~~G~G 62 (90)
+++.+ +.|.+.+.+..+++.+.+.++|++.++..
T Consensus 60 ~vdgiii~~~~~~~~~~~~~~a~~~gipvV~~d~~ 94 (316)
T 1tjy_A 60 GYDAIIVSAVSPDGLCPALKRAMQRGVKILTWDSD 94 (316)
T ss_dssp TCSEEEECCSSSSTTHHHHHHHHHTTCEEEEESSC
T ss_pred CCCEEEEeCCCHHHHHHHHHHHHHCcCEEEEecCC
Confidence 36664 45666666677888899999999998653
No 312
>3pzl_A Agmatine ureohydrolase; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics; 2.70A {Thermoplasma volcanium GSS1}
Probab=32.36 E-value=44 Score=23.54 Aligned_cols=34 Identities=29% Similarity=0.407 Sum_probs=24.8
Q ss_pred cCCHH----HHHHHHHHHHhCCCcEEEEcCCCCCCCCc
Q psy4717 36 TESTE----DVEKVVQVAHDHNLVIIPFGGGTNVTGAV 69 (90)
Q Consensus 36 P~s~~----~v~~vv~~a~~~~i~v~~~G~G~n~~~~~ 69 (90)
|.+.+ .+++.++-+-+.+.-.+.+||+|+++.+.
T Consensus 93 ~~~~~~~~~~i~~~v~~~l~~g~~PivlGGdHsit~~~ 130 (313)
T 3pzl_A 93 SEDVEYVIDTVESVVSAVMSDGKIPIMLGGEHSITVGA 130 (313)
T ss_dssp CSCHHHHHHHHHHHHHHHHHTTCEEEEEESSGGGHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHhCCCEEEEECCchHHHHHH
Confidence 66655 45556666667888888999999987554
No 313
>2eh6_A Acoat, acetylornithine aminotransferase; ARGD, structural genomics, NPPSFA, national project on prote structural and functional analyses; HET: PLP; 1.90A {Aquifex aeolicus}
Probab=32.32 E-value=32 Score=23.35 Aligned_cols=22 Identities=14% Similarity=0.380 Sum_probs=18.8
Q ss_pred CCHHHHHHHHHHHHhCCCcEEE
Q psy4717 37 ESTEDVEKVVQVAHDHNLVIIP 58 (90)
Q Consensus 37 ~s~~~v~~vv~~a~~~~i~v~~ 58 (90)
.+.+++.++.++|+++++.++.
T Consensus 190 ~~~~~l~~i~~~~~~~~~~li~ 211 (375)
T 2eh6_A 190 ASEDFLSKLQEICKEKDVLLII 211 (375)
T ss_dssp CCHHHHHHHHHHHHHHTCEEEE
T ss_pred CCHHHHHHHHHHHHHhCCEEEE
Confidence 3567799999999999988776
No 314
>3ucq_A Amylosucrase; thermostability, amylose synthesis, sucrose isomerization, beta/alpha-barrel, carbohydrate binding, transferase; 1.97A {Deinococcus geothermalis} PDB: 3uer_A*
Probab=32.28 E-value=41 Score=25.88 Aligned_cols=22 Identities=5% Similarity=0.282 Sum_probs=20.3
Q ss_pred CCHHHHHHHHHHHHhCCCcEEE
Q psy4717 37 ESTEDVEKVVQVAHDHNLVIIP 58 (90)
Q Consensus 37 ~s~~~v~~vv~~a~~~~i~v~~ 58 (90)
.|.+|++++++.|++.|+.|+.
T Consensus 158 Gt~~d~~~lv~~~h~~Gi~Vi~ 179 (655)
T 3ucq_A 158 GTMDDLSALARALRGRGISLVL 179 (655)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEE
T ss_pred CCHHHHHHHHHHHHHCCCEEEE
Confidence 5889999999999999999876
No 315
>1usg_A Leucine-specific binding protein; leucine-binding protein, X-RAY crystallography, protein structure, ABC transport systems, transport protein; 1.53A {Escherichia coli} SCOP: c.93.1.1 PDB: 1usi_A* 1usk_A 2lbp_A 1z15_A 1z16_A 1z17_A 1z18_A 2liv_A
Probab=32.18 E-value=65 Score=21.35 Aligned_cols=33 Identities=9% Similarity=0.078 Sum_probs=26.5
Q ss_pred CccEEEEcCCHHHHHHHHHHHHhCCCcEEEEcC
Q psy4717 29 GTRYWCITESTEDVEKVVQVAHDHNLVIIPFGG 61 (90)
Q Consensus 29 ~p~~vv~P~s~~~v~~vv~~a~~~~i~v~~~G~ 61 (90)
.|++|+...+..+...+++.+++.|+.+-.+|+
T Consensus 193 ~~d~i~~~~~~~~a~~~~~~~~~~g~~~~~~~~ 225 (346)
T 1usg_A 193 NIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGP 225 (346)
T ss_dssp TCCEEEEESCHHHHHHHHHHHHHTTCCCEEEEC
T ss_pred CCCEEEEcCcchHHHHHHHHHHHcCCCCeEEec
Confidence 489999998888889999999998875544443
No 316
>3p04_A Uncharacterized BCR; SEPF homolog, DUF552, PSI-biology, NESG, structural genomics structure initiative; 2.20A {Corynebacterium glutamicum}
Probab=32.16 E-value=44 Score=19.39 Aligned_cols=21 Identities=19% Similarity=-0.010 Sum_probs=17.4
Q ss_pred EEEEcCCHHHHHHHHHHHHhC
Q psy4717 32 YWCITESTEDVEKVVQVAHDH 52 (90)
Q Consensus 32 ~vv~P~s~~~v~~vv~~a~~~ 52 (90)
.++.|++-+|.+++.+..++.
T Consensus 8 vv~~P~sy~Da~~I~d~Lr~~ 28 (87)
T 3p04_A 8 VPVELHSFEDAQVIGGAFRDG 28 (87)
T ss_dssp EEEECSSGGGHHHHHHHHHTT
T ss_pred EEEecCcHHHHHHHHHHHHCC
Confidence 578899999999998887764
No 317
>3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes}
Probab=32.08 E-value=35 Score=21.19 Aligned_cols=25 Identities=0% Similarity=0.077 Sum_probs=21.6
Q ss_pred HHHHHHHHHHHhCCCcEEEEcCCCC
Q psy4717 40 EDVEKVVQVAHDHNLVIIPFGGGTN 64 (90)
Q Consensus 40 ~~v~~vv~~a~~~~i~v~~~G~G~n 64 (90)
..+.++++.+++.|+++.+.+++..
T Consensus 37 ~g~~~~L~~L~~~g~~~~i~Tn~~~ 61 (189)
T 3ib6_A 37 KNAKETLEKVKQLGFKQAILSNTAT 61 (189)
T ss_dssp TTHHHHHHHHHHTTCEEEEEECCSS
T ss_pred cCHHHHHHHHHHCCCEEEEEECCCc
Confidence 4678889999999999999998864
No 318
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=32.04 E-value=47 Score=22.48 Aligned_cols=34 Identities=12% Similarity=-0.025 Sum_probs=28.1
Q ss_pred CccEEEEcCCHHHHHHHHHHHHhCCCcEEEEcCC
Q psy4717 29 GTRYWCITESTEDVEKVVQVAHDHNLVIIPFGGG 62 (90)
Q Consensus 29 ~p~~vv~P~s~~~v~~vv~~a~~~~i~v~~~G~G 62 (90)
.+++++--++.+.+.+.++.|.++++++++-..|
T Consensus 45 ~~DvvIDfT~p~a~~~~~~~a~~~g~~~VigTTG 78 (245)
T 1p9l_A 45 NTEVVIDFTHPDVVMGNLEFLIDNGIHAVVGTTG 78 (245)
T ss_dssp TCCEEEECSCTTTHHHHHHHHHHTTCEEEECCCC
T ss_pred CCcEEEEccChHHHHHHHHHHHHcCCCEEEcCCC
Confidence 5788887778888899999999999998875554
No 319
>2jgn_A DBX, DDX3, ATP-dependent RNA helicase DDX3X; phosphorylation, nucleotide-binding, hydrolase, RNA-binding, ATP-binding, DNA-binding, nuclear protein; 1.91A {Homo sapiens}
Probab=32.02 E-value=92 Score=19.46 Aligned_cols=36 Identities=6% Similarity=0.111 Sum_probs=28.3
Q ss_pred CccEEEEcCCHHHHHHHHHHHHhCCCcEEEEcCCCC
Q psy4717 29 GTRYWCITESTEDVEKVVQVAHDHNLVIIPFGGGTN 64 (90)
Q Consensus 29 ~p~~vv~P~s~~~v~~vv~~a~~~~i~v~~~G~G~n 64 (90)
....+|+..+.+.+..+.+...+.++++.++-|+.+
T Consensus 46 ~~k~lVF~~~~~~~~~l~~~L~~~g~~~~~lhg~~~ 81 (185)
T 2jgn_A 46 DSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRS 81 (185)
T ss_dssp CSCEEEEESCHHHHHHHHHHHHHTTCCEEEEC----
T ss_pred CCeEEEEECCHHHHHHHHHHHHHcCCceEEEeCCCC
Confidence 456899999999999999999999999888877653
No 320
>3vgf_A Malto-oligosyltrehalose trehalohydrolase; alpha/beta barrel, alpha-amylas hydrolase; HET: GLC FLC; 2.30A {Sulfolobus solfataricus} PDB: 3vge_A* 3vgd_A* 3vgb_A* 1eh9_A* 3vgh_A* 3vgg_A* 1eha_A
Probab=31.97 E-value=32 Score=25.92 Aligned_cols=22 Identities=32% Similarity=0.406 Sum_probs=19.9
Q ss_pred CCHHHHHHHHHHHHhCCCcEEE
Q psy4717 37 ESTEDVEKVVQVAHDHNLVIIP 58 (90)
Q Consensus 37 ~s~~~v~~vv~~a~~~~i~v~~ 58 (90)
.+.+|++++++.|+++|+.|+.
T Consensus 165 Gt~~d~~~lv~~~h~~Gi~Vil 186 (558)
T 3vgf_A 165 GGPEGFRKLVDEAHKKGLGVIL 186 (558)
T ss_dssp THHHHHHHHHHHHHHTTCEEEE
T ss_pred CCHHHHHHHHHHHHHcCCEEEE
Confidence 3579999999999999999887
No 321
>3cf4_G Acetyl-COA decarboxylase/synthase epsilon subunit; methanomicrobia, iron-nikel-sulfur, 4Fe-NI-4S, oxidoreductas; 2.00A {Methanosarcina barkeri}
Probab=31.87 E-value=17 Score=23.03 Aligned_cols=23 Identities=26% Similarity=0.469 Sum_probs=13.4
Q ss_pred HHHHHHHHHHHhCCCcEEEEcCC
Q psy4717 40 EDVEKVVQVAHDHNLVIIPFGGG 62 (90)
Q Consensus 40 ~~v~~vv~~a~~~~i~v~~~G~G 62 (90)
+...++.+++.+.++|++.-..|
T Consensus 49 ~a~~~l~~lae~~~iPV~~t~~g 71 (170)
T 3cf4_G 49 ELLDRVVKISKAANIPIAATGSS 71 (170)
T ss_dssp HHHHHHHHHHHHHTCCEEECTTT
T ss_pred hHHHHHHHHHHHhCCCEEECccc
Confidence 44555666666666666654443
No 322
>1yd7_A 2-keto acid:ferredoxin oxidoreductase subunit alpha; structural genomics, southeast collaboratory for structural genomics, secsg; 2.30A {Pyrococcus furiosus}
Probab=31.84 E-value=46 Score=24.02 Aligned_cols=33 Identities=6% Similarity=-0.039 Sum_probs=27.1
Q ss_pred ccEEEEcCCHHHHHHHHHHHH----hCCCcEEEEcCC
Q psy4717 30 TRYWCITESTEDVEKVVQVAH----DHNLVIIPFGGG 62 (90)
Q Consensus 30 p~~vv~P~s~~~v~~vv~~a~----~~~i~v~~~G~G 62 (90)
...++.|.|.+|+..++.+|- +.+.|++.+--+
T Consensus 151 g~~vl~p~~~qea~~l~~~A~~lA~~~~~PVi~~~~~ 187 (395)
T 1yd7_A 151 SLIVLSPSTVQEAFDFTIRAFNLSEKYRTPVILLTDA 187 (395)
T ss_dssp CCEEECCCSHHHHHHHHHHHHHHHHHHTSEEEEEECH
T ss_pred ceEEEeCCCHHHHHHHHHHHHHHHHHHCCCEEEEcch
Confidence 478999999999998888876 667899887543
No 323
>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A*
Probab=31.76 E-value=42 Score=23.42 Aligned_cols=21 Identities=14% Similarity=0.445 Sum_probs=18.5
Q ss_pred CHHHHHHHHHHHHhCCCcEEE
Q psy4717 38 STEDVEKVVQVAHDHNLVIIP 58 (90)
Q Consensus 38 s~~~v~~vv~~a~~~~i~v~~ 58 (90)
+.+++.+++++|+++++.++.
T Consensus 206 ~~~~l~~l~~~~~~~~~~li~ 226 (428)
T 1iay_A 206 DKDTLKSVLSFTNQHNIHLVC 226 (428)
T ss_dssp CHHHHHHHHHHHHTTTCEEEE
T ss_pred CHHHHHHHHHHHHHCCeEEEE
Confidence 468999999999999998776
No 324
>1sff_A 4-aminobutyrate aminotransferase; enzyme complexes; HET: IK2; 1.90A {Escherichia coli} SCOP: c.67.1.4 PDB: 1sf2_A* 1szk_A* 1szu_A* 1szs_A*
Probab=31.74 E-value=33 Score=23.83 Aligned_cols=21 Identities=14% Similarity=0.425 Sum_probs=18.7
Q ss_pred CHHHHHHHHHHHHhCCCcEEE
Q psy4717 38 STEDVEKVVQVAHDHNLVIIP 58 (90)
Q Consensus 38 s~~~v~~vv~~a~~~~i~v~~ 58 (90)
+.++++++.++|+++++.++.
T Consensus 218 ~~~~l~~l~~l~~~~~~~li~ 238 (426)
T 1sff_A 218 SPAFMQRLRALCDEHGIMLIA 238 (426)
T ss_dssp CHHHHHHHHHHHHHHTCEEEE
T ss_pred CHHHHHHHHHHHHHcCCEEEE
Confidence 678899999999999998776
No 325
>1pq3_A Arginase II, mitochondrial precursor; biosynthetic protein, hydrolase; HET: S2C; 2.70A {Homo sapiens} SCOP: c.42.1.1
Probab=31.66 E-value=46 Score=23.01 Aligned_cols=30 Identities=17% Similarity=0.329 Sum_probs=21.8
Q ss_pred HHHHHHHHHHHhCCCcEEEEcCCCCCCCCc
Q psy4717 40 EDVEKVVQVAHDHNLVIIPFGGGTNVTGAV 69 (90)
Q Consensus 40 ~~v~~vv~~a~~~~i~v~~~G~G~n~~~~~ 69 (90)
+.+++.++-+-+.+.-.+.+||.|+++.+.
T Consensus 74 ~~i~~~v~~~l~~g~~pi~lGGdHsit~~~ 103 (306)
T 1pq3_A 74 QELAEVVSRAVSDGYSCVTLGGDHSLAIGT 103 (306)
T ss_dssp HHHHHHHHHHHHTTCEEEEEESSGGGHHHH
T ss_pred HHHHHHHHHHHhCCCeEEEEcCcccchHhH
Confidence 456666666667777778899999986543
No 326
>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1
Probab=31.62 E-value=33 Score=23.44 Aligned_cols=21 Identities=24% Similarity=0.384 Sum_probs=18.2
Q ss_pred HHHHHHHHHHHHhCCCcEEEE
Q psy4717 39 TEDVEKVVQVAHDHNLVIIPF 59 (90)
Q Consensus 39 ~~~v~~vv~~a~~~~i~v~~~ 59 (90)
.+++.++.++|+++++.++.=
T Consensus 182 ~~~l~~i~~~~~~~~~~li~D 202 (388)
T 1j32_A 182 PDEVRAIAQVAVEAGLWVLSD 202 (388)
T ss_dssp HHHHHHHHHHHHHHTCEEEEE
T ss_pred HHHHHHHHHHHHHcCCEEEEE
Confidence 489999999999999887764
No 327
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=31.53 E-value=58 Score=21.84 Aligned_cols=28 Identities=7% Similarity=-0.137 Sum_probs=24.3
Q ss_pred EEEEcCCHHHHHHHHHHHHhCCCcEEEE
Q psy4717 32 YWCITESTEDVEKVVQVAHDHNLVIIPF 59 (90)
Q Consensus 32 ~vv~P~s~~~v~~vv~~a~~~~i~v~~~ 59 (90)
.+....+.+|+..+++-+.+.|+.+++-
T Consensus 133 ~~~~~~~~ee~~~~i~~l~~~G~~vVVG 160 (225)
T 2pju_A 133 DQRSYITEEDARGQINELKANGTEAVVG 160 (225)
T ss_dssp EEEEESSHHHHHHHHHHHHHTTCCEEEE
T ss_pred EEEEeCCHHHHHHHHHHHHHCCCCEEEC
Confidence 4577889999999999999999999664
No 328
>3k8k_A Alpha-amylase, SUSG; alpha8/BETA8 barrel, CBM, beta-sandwich, membrane protein; 2.20A {Bacteroides thetaiotaomicron} PDB: 3k8m_A* 3k8l_A*
Probab=31.30 E-value=44 Score=26.00 Aligned_cols=22 Identities=23% Similarity=0.425 Sum_probs=20.3
Q ss_pred CCHHHHHHHHHHHHhCCCcEEE
Q psy4717 37 ESTEDVEKVVQVAHDHNLVIIP 58 (90)
Q Consensus 37 ~s~~~v~~vv~~a~~~~i~v~~ 58 (90)
.+.+|++++++.|++.|+.++.
T Consensus 104 Gt~~d~~~lv~~~h~~gi~vi~ 125 (669)
T 3k8k_A 104 GTESDFDRLVTEAHNRGIKIYL 125 (669)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEE
T ss_pred CCHHHHHHHHHHHHHcCCEEEE
Confidence 6899999999999999999875
No 329
>2pb2_A Acetylornithine/succinyldiaminopimelate aminotran; ARGD, pyridoxal 5'-phosphate, arginine metabolism, lysine biosynthesis, gabaculine; HET: PLP; 1.91A {Salmonella typhimurium} PDB: 2pb0_A*
Probab=31.24 E-value=52 Score=23.15 Aligned_cols=21 Identities=10% Similarity=0.289 Sum_probs=18.7
Q ss_pred CHHHHHHHHHHHHhCCCcEEE
Q psy4717 38 STEDVEKVVQVAHDHNLVIIP 58 (90)
Q Consensus 38 s~~~v~~vv~~a~~~~i~v~~ 58 (90)
+.++++++.++|+++++.++.
T Consensus 220 ~~~~l~~l~~l~~~~gi~lI~ 240 (420)
T 2pb2_A 220 TPEFLKGLRDLCDEHQALLVF 240 (420)
T ss_dssp CHHHHHHHHHHHHHTTCEEEE
T ss_pred CHHHHHHHHHHHHHcCCEEEE
Confidence 478999999999999998875
No 330
>2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2
Probab=31.22 E-value=60 Score=19.63 Aligned_cols=26 Identities=4% Similarity=0.197 Sum_probs=22.2
Q ss_pred HHHHHHHHHHHhCCCcEEEEcCCCCC
Q psy4717 40 EDVEKVVQVAHDHNLVIIPFGGGTNV 65 (90)
Q Consensus 40 ~~v~~vv~~a~~~~i~v~~~G~G~n~ 65 (90)
+++.++++.+++.|+++.+.+++...
T Consensus 94 ~~~~~~l~~l~~~g~~~~i~t~~~~~ 119 (206)
T 2b0c_A 94 PEVIAIMHKLREQGHRVVVLSNTNRL 119 (206)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECCCCC
T ss_pred ccHHHHHHHHHHCCCeEEEEECCChH
Confidence 67889999999999999999887644
No 331
>2xgg_A Microneme protein 2; A/I domain, cell adhesion, hydrolase; 2.05A {Toxoplasma gondii}
Probab=31.10 E-value=37 Score=20.94 Aligned_cols=28 Identities=7% Similarity=0.061 Sum_probs=21.0
Q ss_pred HHHHHHHHHHHHhCCCcEEEEcCCCCCC
Q psy4717 39 TEDVEKVVQVAHDHNLVIIPFGGGTNVT 66 (90)
Q Consensus 39 ~~~v~~vv~~a~~~~i~v~~~G~G~n~~ 66 (90)
..++.++.+.+++.++.++++|=|..+.
T Consensus 137 ~~~~~~~~~~l~~~gi~v~~igvG~~~~ 164 (178)
T 2xgg_A 137 DFRTVRAAKEIRELGGIVTVLAVGHYVA 164 (178)
T ss_dssp HHHHSHHHHHHHHTTCEEEEEECC----
T ss_pred CccHHHHHHHHHHCCCEEEEEEcCCcCC
Confidence 3458889999999999999999998764
No 332
>1jeo_A MJ1247, hypothetical protein MJ1247; RUMP pathway, phosphosugar, 3-hexulose-6-phosphate isomerase structural genomics; HET: CME CIT; 2.00A {Methanocaldococcus jannaschii} SCOP: c.80.1.3
Probab=31.06 E-value=59 Score=19.97 Aligned_cols=26 Identities=31% Similarity=0.216 Sum_probs=22.3
Q ss_pred cCCHHHHHHHHHHHHhCCCcEEEEcC
Q psy4717 36 TESTEDVEKVVQVAHDHNLVIIPFGG 61 (90)
Q Consensus 36 P~s~~~v~~vv~~a~~~~i~v~~~G~ 61 (90)
.....++.++++.|++.|.+++.+.+
T Consensus 92 sG~t~~~~~~~~~ak~~g~~vi~IT~ 117 (180)
T 1jeo_A 92 SGRTESVLTVAKKAKNINNNIIAIVC 117 (180)
T ss_dssp SSCCHHHHHHHHHHHTTCSCEEEEES
T ss_pred CCCcHHHHHHHHHHHHCCCcEEEEeC
Confidence 44558899999999999999998866
No 333
>3fxa_A SIS domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.60A {Listeria monocytogenes str}
Probab=31.05 E-value=47 Score=20.96 Aligned_cols=9 Identities=0% Similarity=-0.215 Sum_probs=4.0
Q ss_pred CCCcEEEEc
Q psy4717 52 HNLVIIPFG 60 (90)
Q Consensus 52 ~~i~v~~~G 60 (90)
.++++....
T Consensus 70 ~g~~~~~~~ 78 (201)
T 3fxa_A 70 IERPAVFLT 78 (201)
T ss_dssp TTCCEEECC
T ss_pred cCCcEEEeC
Confidence 444444443
No 334
>2aeu_A Hypothetical protein MJ0158; selenocysteine synthase, PLP, pyridoxal phosphate, HOMO- oligomerization, unknown function; 1.70A {Methanocaldococcus jannaschii} SCOP: c.67.1.8 PDB: 2aev_A*
Probab=31.01 E-value=38 Score=23.55 Aligned_cols=23 Identities=17% Similarity=0.333 Sum_probs=19.8
Q ss_pred CHHHHHHHHHHHHhCCCcEEEEc
Q psy4717 38 STEDVEKVVQVAHDHNLVIIPFG 60 (90)
Q Consensus 38 s~~~v~~vv~~a~~~~i~v~~~G 60 (90)
+.++++++.++|+++++.++.=.
T Consensus 157 ~~~~l~~i~~l~~~~~~~li~De 179 (374)
T 2aeu_A 157 ELENFKKVINTAKNKEAIVFVDD 179 (374)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEEC
T ss_pred CcccHHHHHHHHHHcCCEEEEEC
Confidence 68999999999999998877643
No 335
>4a69_A Histone deacetylase 3,; transcription, hydrolase; HET: I0P; 2.06A {Homo sapiens}
Probab=30.99 E-value=56 Score=23.80 Aligned_cols=28 Identities=25% Similarity=0.453 Sum_probs=21.9
Q ss_pred CHHHHHHHHHHHHhCCCcEEEEc-CCCCC
Q psy4717 38 STEDVEKVVQVAHDHNLVIIPFG-GGTNV 65 (90)
Q Consensus 38 s~~~v~~vv~~a~~~~i~v~~~G-~G~n~ 65 (90)
|.+...++.+++++.++|++..+ ||-++
T Consensus 272 t~~g~~~~~~~l~~~~~p~v~v~eGGY~~ 300 (376)
T 4a69_A 272 SIRGHGECVEYVKSFNIPLLVLGGGGYTV 300 (376)
T ss_dssp CHHHHHHHHHHHHTTCCCEEEECCCCCSH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEECCCCCh
Confidence 56888899999999999977664 56653
No 336
>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A*
Probab=30.94 E-value=35 Score=23.21 Aligned_cols=21 Identities=10% Similarity=0.150 Sum_probs=18.3
Q ss_pred CHHHHHHHHHHHHhCCCcEEE
Q psy4717 38 STEDVEKVVQVAHDHNLVIIP 58 (90)
Q Consensus 38 s~~~v~~vv~~a~~~~i~v~~ 58 (90)
+.+++.+++++|+++++.++.
T Consensus 164 ~~~~l~~i~~~~~~~~~~li~ 184 (364)
T 1lc5_A 164 ERPLLQAIADRCKSLNINLIL 184 (364)
T ss_dssp CHHHHHHHHHHHHHHTCEEEE
T ss_pred CHHHHHHHHHHhhhcCcEEEE
Confidence 458899999999999988776
No 337
>3bzc_A TEX; helix-turn-helix, helix-hairpin-helix, S1 domain, YQGF domain, transcription, RNA binding protein; 2.27A {Pseudomonas aeruginosa} SCOP: a.60.2.6 a.60.2.6 a.294.1.1 b.40.4.5 c.55.3.13 PDB: 3bzk_A 2oce_A
Probab=30.92 E-value=37 Score=27.29 Aligned_cols=26 Identities=19% Similarity=0.463 Sum_probs=23.3
Q ss_pred HHHHHHHHHHHHhCCCcEEEEcCCCC
Q psy4717 39 TEDVEKVVQVAHDHNLVIIPFGGGTN 64 (90)
Q Consensus 39 ~~~v~~vv~~a~~~~i~v~~~G~G~n 64 (90)
.++...+.+++.++++.++++|+||.
T Consensus 369 ~~~~~~l~~li~~~~~~~IaIGngta 394 (785)
T 3bzc_A 369 DQTLAVLAALCAKHQVELIAIGNGTA 394 (785)
T ss_dssp HHHHHHHHHHHHHHTCCEEEEESSTT
T ss_pred HHHHHHHHHHHHHcCCCEEEECCCcc
Confidence 56788999999999999999999963
No 338
>2ay1_A Aroat, aromatic amino acid aminotransferase; HET: PLP AHC; 2.20A {Paracoccus denitrificans} SCOP: c.67.1.1 PDB: 1ay5_A* 1ay4_A* 1ay8_A* 2ay2_A* 2ay3_A* 2ay4_A* 2ay5_A* 2ay6_A* 2ay7_A* 2ay8_A* 2ay9_A*
Probab=30.88 E-value=35 Score=23.40 Aligned_cols=21 Identities=0% Similarity=0.112 Sum_probs=18.3
Q ss_pred CHHHHHHHHHHHHhCCCcEEE
Q psy4717 38 STEDVEKVVQVAHDHNLVIIP 58 (90)
Q Consensus 38 s~~~v~~vv~~a~~~~i~v~~ 58 (90)
+.+++++++++|+++++.++.
T Consensus 187 ~~~~l~~i~~~~~~~~~~li~ 207 (394)
T 2ay1_A 187 TLDQWAEIASILEKTGALPLI 207 (394)
T ss_dssp CHHHHHHHHHHHHHHTCEEEE
T ss_pred CHHHHHHHHHHHHHCCCEEEE
Confidence 468999999999999988775
No 339
>4f4e_A Aromatic-amino-acid aminotransferase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: LLP; 1.80A {Burkholderia pseudomallei} PDB: 4eff_A*
Probab=30.83 E-value=34 Score=23.92 Aligned_cols=21 Identities=24% Similarity=0.278 Sum_probs=18.3
Q ss_pred CHHHHHHHHHHHHhCCCcEEE
Q psy4717 38 STEDVEKVVQVAHDHNLVIIP 58 (90)
Q Consensus 38 s~~~v~~vv~~a~~~~i~v~~ 58 (90)
+.+++.+++++|+++++.++.
T Consensus 213 ~~~~l~~i~~~~~~~~~~li~ 233 (420)
T 4f4e_A 213 NDAQWAQVVEVVKARRLVPFL 233 (420)
T ss_dssp CHHHHHHHHHHHHHHTCEEEE
T ss_pred CHHHHHHHHHHHHHCCcEEEE
Confidence 468999999999999987765
No 340
>2fn9_A Ribose ABC transporter, periplasmic ribose-bindin; RBP, ribose binding protein, periplasmic binding protein, thermophilic proteins; 1.40A {Thermotoga maritima} PDB: 2fn8_A*
Probab=30.83 E-value=32 Score=22.46 Aligned_cols=34 Identities=12% Similarity=0.138 Sum_probs=23.6
Q ss_pred CccEEEE-cCCHHHHHHHHHHHHhCCCcEEEEcCC
Q psy4717 29 GTRYWCI-TESTEDVEKVVQVAHDHNLVIIPFGGG 62 (90)
Q Consensus 29 ~p~~vv~-P~s~~~v~~vv~~a~~~~i~v~~~G~G 62 (90)
+++.++. |.+.++....++.+.+.++|++.++..
T Consensus 58 ~vdgiI~~~~~~~~~~~~~~~~~~~~iPvV~~~~~ 92 (290)
T 2fn9_A 58 GYDAIIFNPTDADGSIANVKRAKEAGIPVFCVDRG 92 (290)
T ss_dssp TCSEEEECCSCTTTTHHHHHHHHHTTCCEEEESSC
T ss_pred CCCEEEEecCChHHHHHHHHHHHHCCCeEEEEecC
Confidence 3665554 555555556778888899999998753
No 341
>1r9j_A Transketolase; domains, EACH of the alpha/beta type, thiamine diphosphate binding domain, transferase; HET: TPP; 2.22A {Leishmania mexicana mexicana} SCOP: c.36.1.6 c.36.1.10 c.48.1.1
Probab=30.79 E-value=56 Score=25.43 Aligned_cols=32 Identities=6% Similarity=-0.138 Sum_probs=26.6
Q ss_pred cEEEEcCCHHHHHHHHHHHHhC-CCcEEEEcCC
Q psy4717 31 RYWCITESTEDVEKVVQVAHDH-NLVIIPFGGG 62 (90)
Q Consensus 31 ~~vv~P~s~~~v~~vv~~a~~~-~i~v~~~G~G 62 (90)
-.|+.|.+..|+..+++.|-+. +-|++.+=.-
T Consensus 488 l~V~~Pad~~e~~~~l~~a~~~~~~Pv~i~~~r 520 (673)
T 1r9j_A 488 LQVIRPSDQTETSGAWAVALSSIHTPTVLCLSR 520 (673)
T ss_dssp CEEECCSSHHHHHHHHHHHHHCTTCCEEEECCS
T ss_pred CEEEeCCCHHHHHHHHHHHHHhCCCeEEEEEcC
Confidence 4689999999999999999986 7787776443
No 342
>2cev_A Protein (arginase); enzyme, hydrolase, arginine hydrolysis, nitrogen metabolism, manganese metalloenzyme; 2.15A {Bacillus caldovelox} SCOP: c.42.1.1 PDB: 1cev_A 3cev_A* 4cev_A 5cev_A*
Probab=30.79 E-value=49 Score=22.80 Aligned_cols=31 Identities=13% Similarity=0.225 Sum_probs=21.7
Q ss_pred HHHHHHHHHHHHhCCCcEEEEcCCCCCCCCc
Q psy4717 39 TEDVEKVVQVAHDHNLVIIPFGGGTNVTGAV 69 (90)
Q Consensus 39 ~~~v~~vv~~a~~~~i~v~~~G~G~n~~~~~ 69 (90)
.+++++.++-+-+.+.-.+.+||.|+++.+.
T Consensus 75 ~~~i~~~v~~~l~~g~~pi~lGGdHsit~~~ 105 (299)
T 2cev_A 75 NEKLAAAVDQVVQRGRFPLVLGGDHSIAIGT 105 (299)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEESSGGGHHHH
T ss_pred HHHHHHHHHHHHhCCCeEEEecCCcccchhh
Confidence 3455666666666777778899999986443
No 343
>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} SCOP: c.67.1.1 PDB: 2qa3_A* 2qb2_A* 2qb3_A* 2qbt_A* 3qn6_A* 3pa9_A* 1aaw_A* 1amq_A* 1ams_A* 1arg_A* 1amr_A* 1art_A* 1asa_A* 1asd_A* 1ase_A* 1asl_A* 1asm_A* 1asn_A* 1c9c_A* 1cq6_A* ...
Probab=30.68 E-value=35 Score=23.33 Aligned_cols=21 Identities=10% Similarity=0.170 Sum_probs=18.3
Q ss_pred CHHHHHHHHHHHHhCCCcEEE
Q psy4717 38 STEDVEKVVQVAHDHNLVIIP 58 (90)
Q Consensus 38 s~~~v~~vv~~a~~~~i~v~~ 58 (90)
+.+++++++++|+++++.++.
T Consensus 190 ~~~~l~~l~~~~~~~~~~li~ 210 (396)
T 2q7w_A 190 TLEQWQTLAQLSVEKGWLPLF 210 (396)
T ss_dssp CHHHHHHHHHHHHHHTCEEEE
T ss_pred CHHHHHHHHHHHHHCCCEEEE
Confidence 358999999999999988776
No 344
>1x92_A APC5045, phosphoheptose isomerase; midwest centre for structural genomics, SIS domain, A/B protein, lipopolysaccharide biosynthesis, PSI; HET: M7P; 2.30A {Pseudomonas aeruginosa} SCOP: c.80.1.3 PDB: 3bjz_A
Probab=30.60 E-value=50 Score=20.76 Aligned_cols=27 Identities=22% Similarity=0.570 Sum_probs=22.9
Q ss_pred EcCCHHHHHHHHHHHHhCCCcEEEEcC
Q psy4717 35 ITESTEDVEKVVQVAHDHNLVIIPFGG 61 (90)
Q Consensus 35 ~P~s~~~v~~vv~~a~~~~i~v~~~G~ 61 (90)
......++.++++.|++.|.+++.+.+
T Consensus 122 ~SG~t~~~i~~~~~ak~~g~~vI~IT~ 148 (199)
T 1x92_A 122 TSGNSANVIQAIQAAHDREMLVVALTG 148 (199)
T ss_dssp SSSCCHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCCCHHHHHHHHHHHHCCCEEEEEEC
Confidence 345568999999999999999998866
No 345
>1m3u_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; beta-alpha-barrel, TIM-barrel, ketopantoate, selenomethionin decamer; HET: KPL; 1.80A {Escherichia coli} SCOP: c.1.12.8
Probab=30.59 E-value=74 Score=22.11 Aligned_cols=37 Identities=14% Similarity=0.311 Sum_probs=27.1
Q ss_pred cCccEEEEcCCHHHHHHHHHHHHhCCCcEEEEcCCCCCC
Q psy4717 28 IGTRYWCITESTEDVEKVVQVAHDHNLVIIPFGGGTNVT 66 (90)
Q Consensus 28 ~~p~~vv~P~s~~~v~~vv~~a~~~~i~v~~~G~G~n~~ 66 (90)
.++++++.+.-.+++.+ +++.+-.+|++-+|.|....
T Consensus 173 AGA~~ivlE~vp~~~a~--~it~~l~iP~igIGag~~~d 209 (264)
T 1m3u_A 173 AGAQLLVLECVPVELAK--RITEALAIPVIGIGAGNVTD 209 (264)
T ss_dssp HTCCEEEEESCCHHHHH--HHHHHCSSCEEEESSCTTSS
T ss_pred CCCcEEEEecCCHHHHH--HHHHhCCCCEEEeCCCCCCC
Confidence 46777777665555544 56677889999999998764
No 346
>3ujp_A Mn transporter subunit; manganese binding protein, metal binding protein; 2.70A {Synechocystis SP} PDB: 1xvl_A 3v63_A
Probab=30.54 E-value=51 Score=23.07 Aligned_cols=29 Identities=14% Similarity=0.177 Sum_probs=24.4
Q ss_pred cCCHHHHHHHHHHHHhCCCcEEEEcCCCC
Q psy4717 36 TESTEDVEKVVQVAHDHNLVIIPFGGGTN 64 (90)
Q Consensus 36 P~s~~~v~~vv~~a~~~~i~v~~~G~G~n 64 (90)
.-|..+++++++.+++++++++..-...+
T Consensus 222 ePs~~~l~~l~~~ik~~~v~~If~e~~~~ 250 (307)
T 3ujp_A 222 QFTPKQVQTVIEEVKTNNVPTIFCESTVS 250 (307)
T ss_dssp CCCHHHHHHHHHHHHTTTCSEEEEETTSC
T ss_pred CCCHHHHHHHHHHHHhcCCcEEEEeCCCC
Confidence 34789999999999999999988765543
No 347
>2vo9_A EAD500, L-alanyl-D-glutamate peptidase; cell WALL biogenesis/degradation, secreted, cell WALL, hydro; 1.8A {Bacteriophage A500} SCOP: d.65.1.5
Probab=30.52 E-value=20 Score=23.29 Aligned_cols=29 Identities=7% Similarity=0.119 Sum_probs=24.5
Q ss_pred EEcCCHHHHHHHHHHHHhCCCcEEEEcCC
Q psy4717 34 CITESTEDVEKVVQVAHDHNLVIIPFGGG 62 (90)
Q Consensus 34 v~P~s~~~v~~vv~~a~~~~i~v~~~G~G 62 (90)
+.|.-.+.+.++++.|.+.|+.+.+.+|=
T Consensus 33 l~~~aa~al~~m~~~a~~~Gi~l~i~sgy 61 (179)
T 2vo9_A 33 MYKITSDKTRNVIKKMAKEGIYLCVAQGY 61 (179)
T ss_dssp SCHHHHHHHHHHHHHHHTTTCCEEEEECC
T ss_pred cCHHHHHHHHHHHHHHHHCCCeEEEEEEE
Confidence 55667789999999999999999988763
No 348
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=30.51 E-value=36 Score=22.09 Aligned_cols=29 Identities=10% Similarity=0.160 Sum_probs=24.5
Q ss_pred cEEEEcCCHHHHHHHHHHHHhCCCcEEEE
Q psy4717 31 RYWCITESTEDVEKVVQVAHDHNLVIIPF 59 (90)
Q Consensus 31 ~~vv~P~s~~~v~~vv~~a~~~~i~v~~~ 59 (90)
-.+....+.+|+..+++-+.+.|+.+++-
T Consensus 120 i~~~~~~~~~e~~~~i~~l~~~G~~vvVG 148 (196)
T 2q5c_A 120 IKEFLFSSEDEITTLISKVKTENIKIVVS 148 (196)
T ss_dssp EEEEEECSGGGHHHHHHHHHHTTCCEEEE
T ss_pred eEEEEeCCHHHHHHHHHHHHHCCCeEEEC
Confidence 34567799999999999999999999663
No 349
>3qbe_A 3-dehydroquinate synthase; shikimate pathway, mycobacte tuberculosis, nicotinamide adenine dinucleotide (NAD)-depen enzyme; 2.07A {Mycobacterium tuberculosis} PDB: 3qbd_A
Probab=30.40 E-value=22 Score=25.77 Aligned_cols=28 Identities=18% Similarity=0.326 Sum_probs=21.8
Q ss_pred CHHHHHHHHHHHHhCCC----cEEEEcCCCCC
Q psy4717 38 STEDVEKVVQVAHDHNL----VIIPFGGGTNV 65 (90)
Q Consensus 38 s~~~v~~vv~~a~~~~i----~v~~~G~G~n~ 65 (90)
+.+.+.++++.+.+.++ -++.+|||+-.
T Consensus 85 t~~~v~~~~~~l~~~~~~r~d~IIavGGGsv~ 116 (368)
T 3qbe_A 85 DLPVVGFIWEVLGRIGIGRKDALVSLGGGAAT 116 (368)
T ss_dssp BHHHHHHHHHHHHHHTCCTTCEEEEEESHHHH
T ss_pred CHHHHHHHHHHHHHcCCCCCcEEEEECChHHH
Confidence 66888899888887663 68888988743
No 350
>1j5p_A Aspartate dehydrogenase; TM1643, structural genomics, JCSG, protein structure initiative, joint center for structural G oxidoreductase; HET: NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3 PDB: 1h2h_A*
Probab=30.15 E-value=56 Score=22.50 Aligned_cols=34 Identities=12% Similarity=-0.022 Sum_probs=28.2
Q ss_pred CccEEEEcCCHHHHHHHHHHHHhCCCcEEEEcCC
Q psy4717 29 GTRYWCITESTEDVEKVVQVAHDHNLVIIPFGGG 62 (90)
Q Consensus 29 ~p~~vv~P~s~~~v~~vv~~a~~~~i~v~~~G~G 62 (90)
.|++|+...+.+.+.+.+.-+-+.|+.++..+.|
T Consensus 60 ~pD~VVe~A~~~av~e~~~~iL~aG~dvv~~S~g 93 (253)
T 1j5p_A 60 DVSTVVECASPEAVKEYSLQILKNPVNYIIISTS 93 (253)
T ss_dssp TCCEEEECSCHHHHHHHHHHHTTSSSEEEECCGG
T ss_pred CCCEEEECCCHHHHHHHHHHHHHCCCCEEEcChh
Confidence 6899999999999888777777888888887654
No 351
>2hpi_A DNA polymerase III alpha subunit; POL-beta-like nucleotidyltransferase fold, transferase; HET: DNA; 3.00A {Thermus aquaticus} PDB: 2hpm_A* 3e0d_A*
Probab=30.09 E-value=13 Score=31.45 Aligned_cols=22 Identities=23% Similarity=0.412 Sum_probs=17.8
Q ss_pred HHHHHHHHHhCCCcEEE-EcCCC
Q psy4717 42 VEKVVQVAHDHNLVIIP-FGGGT 63 (90)
Q Consensus 42 v~~vv~~a~~~~i~v~~-~G~G~ 63 (90)
|.++|+||+++|+++-| ||++-
T Consensus 406 V~D~I~~Ak~~gI~VGpGRGSaA 428 (1220)
T 2hpi_A 406 VQDYINWARGHGVSVGPGRGSAA 428 (1220)
T ss_dssp HHHHHHHHHTTTCCBCSCCGGGG
T ss_pred HHHHHHHHHHCCCcccCCCChHH
Confidence 56889999999999888 66543
No 352
>1vq8_F 50S ribosomal protein L7AE; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: d.79.3.1 PDB: 1vq4_F* 1vq5_F* 1vq6_F* 1vq7_F* 1s72_F* 1vq9_F* 1vqk_F* 1vql_F* 1vqm_F* 1vqn_F* 1vqo_F* 1vqp_F* 1yhq_F* 1yi2_F* 1yij_F* 1yit_F* 1yj9_F* 1yjn_F* 1yjw_F* 2otj_F* ...
Probab=29.89 E-value=19 Score=21.65 Aligned_cols=32 Identities=13% Similarity=0.237 Sum_probs=26.4
Q ss_pred ccEEEEcCCHH--H-HHHHHHHHHhCCCcEEEEcC
Q psy4717 30 TRYWCITESTE--D-VEKVVQVAHDHNLVIIPFGG 61 (90)
Q Consensus 30 p~~vv~P~s~~--~-v~~vv~~a~~~~i~v~~~G~ 61 (90)
+..|+..++.+ + +..+..+|.++++|+...++
T Consensus 46 a~lViiA~D~~~~~~~~~l~~lc~~~~Vp~~~~~s 80 (120)
T 1vq8_F 46 AELVFVAEDVQPEEIVMHIPELADEKGVPFIFVEQ 80 (120)
T ss_dssp CSEEEEESCCSSGGGTTTHHHHHHTTCCCEEEESC
T ss_pred ceEEEEeCCCChHHHHHHHHHHHHhcCCCEEEECC
Confidence 78888888874 3 57889999999999877765
No 353
>2yva_A DNAA initiator-associating protein DIAA; intermolecular disulfide bonding, putative phosphosugar BIND protein, DNAA binding protein; 1.85A {Escherichia coli}
Probab=29.86 E-value=52 Score=20.55 Aligned_cols=28 Identities=21% Similarity=0.388 Sum_probs=23.4
Q ss_pred EcCCHHHHHHHHHHHHhCCCcEEEEcCC
Q psy4717 35 ITESTEDVEKVVQVAHDHNLVIIPFGGG 62 (90)
Q Consensus 35 ~P~s~~~v~~vv~~a~~~~i~v~~~G~G 62 (90)
......++.++++.|++.|++++.+.+-
T Consensus 118 ~SG~t~~~i~~~~~ak~~g~~vI~IT~~ 145 (196)
T 2yva_A 118 TRGNSRDIVKAVEAAVTRDMTIVALTGY 145 (196)
T ss_dssp SSSCCHHHHHHHHHHHHTTCEEEEEECT
T ss_pred CCCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 3455689999999999999999988663
No 354
>2p6n_A ATP-dependent RNA helicase DDX41; DEAD, structural genomics, structural genomic consortium, SGC, hydrolase; 2.60A {Homo sapiens}
Probab=29.82 E-value=1.1e+02 Score=19.32 Aligned_cols=34 Identities=15% Similarity=0.228 Sum_probs=29.4
Q ss_pred ccEEEEcCCHHHHHHHHHHHHhCCCcEEEEcCCC
Q psy4717 30 TRYWCITESTEDVEKVVQVAHDHNLVIIPFGGGT 63 (90)
Q Consensus 30 p~~vv~P~s~~~v~~vv~~a~~~~i~v~~~G~G~ 63 (90)
..++|+..+.+++..+.++..+.++++..+-|+.
T Consensus 55 ~~~lVF~~~~~~~~~l~~~L~~~g~~~~~lhg~~ 88 (191)
T 2p6n_A 55 PPVLIFAEKKADVDAIHEYLLLKGVEAVAIHGGK 88 (191)
T ss_dssp SCEEEECSCHHHHHHHHHHHHHHTCCEEEECTTS
T ss_pred CCEEEEECCHHHHHHHHHHHHHcCCcEEEEeCCC
Confidence 4689999999999999999998899888887764
No 355
>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3
Probab=29.80 E-value=32 Score=23.59 Aligned_cols=20 Identities=15% Similarity=0.449 Sum_probs=17.5
Q ss_pred HHHHHHHHHHHHhCCCcEEE
Q psy4717 39 TEDVEKVVQVAHDHNLVIIP 58 (90)
Q Consensus 39 ~~~v~~vv~~a~~~~i~v~~ 58 (90)
.+++.++.++|+++++.++.
T Consensus 181 ~~~l~~l~~~~~~~~~~li~ 200 (390)
T 1d2f_A 181 CDELEIMADLCERHGVRVIS 200 (390)
T ss_dssp TTHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHHcCCEEEE
Confidence 37899999999999998776
No 356
>3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica}
Probab=29.77 E-value=31 Score=20.89 Aligned_cols=24 Identities=0% Similarity=0.012 Sum_probs=21.0
Q ss_pred HHHHHHHHHHhCCCcEEEEcCCCC
Q psy4717 41 DVEKVVQVAHDHNLVIIPFGGGTN 64 (90)
Q Consensus 41 ~v~~vv~~a~~~~i~v~~~G~G~n 64 (90)
.+.++++.+++.|+++.+.++++.
T Consensus 31 g~~~~l~~L~~~g~~~~i~Tn~~~ 54 (179)
T 3l8h_A 31 GSLQAIARLTQADWTVVLATNQSG 54 (179)
T ss_dssp THHHHHHHHHHTTCEEEEEEECTT
T ss_pred CHHHHHHHHHHCCCEEEEEECCCc
Confidence 577788889999999999999875
No 357
>3gf3_A Glutaconyl-COA decarboxylase subunit A; sodium ION transport, biotin, glutamate fermentation, lyase; HET: COO; 1.75A {Clostridium symbiosum} PDB: 3gf7_A 3glm_A* 3gma_A*
Probab=29.77 E-value=31 Score=26.82 Aligned_cols=28 Identities=7% Similarity=0.069 Sum_probs=24.9
Q ss_pred EEEcCCHHHHHHHHHHHHhCCCcEEEEc
Q psy4717 33 WCITESTEDVEKVVQVAHDHNLVIIPFG 60 (90)
Q Consensus 33 vv~P~s~~~v~~vv~~a~~~~i~v~~~G 60 (90)
+..|.+.+..++.+++|.+.++|++.+=
T Consensus 388 ~l~~~~a~Kaarfi~lcd~f~iPlv~lv 415 (588)
T 3gf3_A 388 KLYRQGLIKMNEFVTLCARDRIPLIWLQ 415 (588)
T ss_dssp EECHHHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CcCHHHHHHHHHHHHHhhhcCCCeEEEe
Confidence 5677888999999999999999999873
No 358
>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*
Probab=29.68 E-value=37 Score=23.35 Aligned_cols=21 Identities=14% Similarity=0.377 Sum_probs=18.5
Q ss_pred CHHHHHHHHHHHHhCCCcEEE
Q psy4717 38 STEDVEKVVQVAHDHNLVIIP 58 (90)
Q Consensus 38 s~~~v~~vv~~a~~~~i~v~~ 58 (90)
+.+++.+++++|+++++.++.
T Consensus 181 ~~~~l~~l~~~~~~~~~~li~ 201 (397)
T 2zyj_A 181 PLPARKRLLQMVMERGLVVVE 201 (397)
T ss_dssp CHHHHHHHHHHHHHHTCCEEE
T ss_pred CHHHHHHHHHHHHHcCCEEEE
Confidence 468999999999999998876
No 359
>3k1d_A 1,4-alpha-glucan-branching enzyme; mycobacterium tuberculosis H37RV, mesophilic human pathogen, RV1326C gene, glycosyl transferase; 2.33A {Mycobacterium tuberculosis}
Probab=29.67 E-value=48 Score=26.18 Aligned_cols=23 Identities=17% Similarity=0.293 Sum_probs=20.6
Q ss_pred CCHHHHHHHHHHHHhCCCcEEEE
Q psy4717 37 ESTEDVEKVVQVAHDHNLVIIPF 59 (90)
Q Consensus 37 ~s~~~v~~vv~~a~~~~i~v~~~ 59 (90)
.+.+|++++|+.|+++||.|+.=
T Consensus 310 Gt~~dfk~lV~~~H~~GI~VilD 332 (722)
T 3k1d_A 310 GTPDDFRALVDALHQAGIGVIVD 332 (722)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEE
T ss_pred CCHHHHHHHHHHHHHcCCEEEEE
Confidence 57899999999999999998764
No 360
>3rf7_A Iron-containing alcohol dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: NAD EPE; 2.12A {Shewanella denitrificans}
Probab=29.63 E-value=24 Score=25.45 Aligned_cols=29 Identities=21% Similarity=0.469 Sum_probs=23.8
Q ss_pred CCHHHHHHHHHHHHhCC---C-cEEEEcCCCCC
Q psy4717 37 ESTEDVEKVVQVAHDHN---L-VIIPFGGGTNV 65 (90)
Q Consensus 37 ~s~~~v~~vv~~a~~~~---i-~v~~~G~G~n~ 65 (90)
.+.+.|.++++.+++++ . -++.+|||+-+
T Consensus 90 pt~~~v~~~~~~~~~~~~~~~D~IIavGGGS~i 122 (375)
T 3rf7_A 90 PTTVQVDELTAQVKAFNTKLPVSVVGLGGGSTM 122 (375)
T ss_dssp CBHHHHHHHHHHHHHHCSSCCSEEEEEESHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCCCCEEEEeCCcHHH
Confidence 36799999999999987 4 48899999854
No 361
>2fc3_A 50S ribosomal protein L7AE; alpha-beta-alpha sandwich, ribosome, RNA binding protein; 1.56A {Aeropyrum pernix} SCOP: d.79.3.1 PDB: 3pla_C* 3id5_C* 3hax_D* 2hvy_D* 3hay_D* 3nvi_B 3nmu_C 3nvk_E* 3lwr_C 3lwo_C* 3lwq_C* 3lwp_C 3lwv_C 3hjw_C* 2czw_A 1pxw_A
Probab=29.62 E-value=21 Score=21.70 Aligned_cols=32 Identities=9% Similarity=0.223 Sum_probs=26.5
Q ss_pred ccEEEEcCCHH--H-HHHHHHHHHhCCCcEEEEcC
Q psy4717 30 TRYWCITESTE--D-VEKVVQVAHDHNLVIIPFGG 61 (90)
Q Consensus 30 p~~vv~P~s~~--~-v~~vv~~a~~~~i~v~~~G~ 61 (90)
+..|+..++.+ + +..+..+|.++++|+...++
T Consensus 45 a~lViiA~D~~~~~~~~~l~~lc~~~~Vp~~~v~s 79 (124)
T 2fc3_A 45 AKLVVIAEDVDPPEIVMHLPLLCDEKKIPYVYVPS 79 (124)
T ss_dssp CSEEEEETTCSSGGGTTTHHHHHHHTTCCEEEESC
T ss_pred ceEEEEcCCCChHHHHHHHHHHHHHcCCCEEEECC
Confidence 78888888874 3 57889999999999887765
No 362
>2a0m_A Arginase superfamily protein; structural genomics, PSI, protein structure initia structural genomics of pathogenic protozoa consortium; 1.60A {Trypanosoma cruzi} SCOP: c.42.1.1
Probab=29.57 E-value=53 Score=22.96 Aligned_cols=31 Identities=19% Similarity=0.269 Sum_probs=22.7
Q ss_pred HHHHHHHHHHHHhCCCcEEEEcCCCCCCCCc
Q psy4717 39 TEDVEKVVQVAHDHNLVIIPFGGGTNVTGAV 69 (90)
Q Consensus 39 ~~~v~~vv~~a~~~~i~v~~~G~G~n~~~~~ 69 (90)
.+.+++.++-.-+.+.-.+.+||.|+++.+.
T Consensus 98 ~~~i~~~v~~~l~~g~~pi~lGGdHsit~~~ 128 (316)
T 2a0m_A 98 HEKLESKVFTVLARGAFPFVIGGGNDQSAPN 128 (316)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEESCGGGHHHH
T ss_pred HHHHHHHHHHHHhCCCeEEEECCcchhhHHH
Confidence 3456666666667788888899999987544
No 363
>3snr_A Extracellular ligand-binding receptor; structural genomics, APC102214, PSI-biology, midwest center structural genomics, MCSG; HET: MSE TYR PHE; 1.49A {Rhodopseudomonas palustris} PDB: 3uk0_A* 3t23_A* 3ukj_A* 4eyo_A* 4eyq_A* 3tx6_A* 4f8j_A* 4fb4_A*
Probab=29.56 E-value=72 Score=21.20 Aligned_cols=34 Identities=12% Similarity=0.018 Sum_probs=29.1
Q ss_pred CccEEEEcCCHHHHHHHHHHHHhCCCcEEEEcCC
Q psy4717 29 GTRYWCITESTEDVEKVVQVAHDHNLVIIPFGGG 62 (90)
Q Consensus 29 ~p~~vv~P~s~~~v~~vv~~a~~~~i~v~~~G~G 62 (90)
+.++|+-|.+......+...+.+.++|++..+..
T Consensus 69 ~v~~iig~~~s~~~~~~~~~~~~~~ip~v~~~~~ 102 (362)
T 3snr_A 69 KADVIMGSSVTPPSVAISNVANEAQIPHIALAPL 102 (362)
T ss_dssp CCSEEEECSSHHHHHHHHHHHHHHTCCEEESSCC
T ss_pred CceEEEcCCCcHHHHHHHHHHHHcCccEEEecCC
Confidence 5788898988888888999999999999987654
No 364
>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare}
Probab=29.51 E-value=36 Score=24.83 Aligned_cols=21 Identities=19% Similarity=0.455 Sum_probs=18.2
Q ss_pred CHHHHHHHHHHHHhCCCcEEE
Q psy4717 38 STEDVEKVVQVAHDHNLVIIP 58 (90)
Q Consensus 38 s~~~v~~vv~~a~~~~i~v~~ 58 (90)
+.+++.+++++|+++++.++.
T Consensus 255 s~~~l~~i~~la~~~~~~li~ 275 (500)
T 3tcm_A 255 AEENQYDIVKFCKNEGLVLLA 275 (500)
T ss_dssp CHHHHHHHHHHHHHHTCEEEE
T ss_pred CHHHHHHHHHHHHHcCCEEEE
Confidence 348999999999999988775
No 365
>1gq6_A Proclavaminate amidino hydrolase; clavaminic, PAH, arginase, antibioti; 1.75A {Streptomyces clavuligerus} SCOP: c.42.1.1 PDB: 1gq7_A
Probab=29.49 E-value=38 Score=23.60 Aligned_cols=31 Identities=16% Similarity=0.215 Sum_probs=22.8
Q ss_pred HHHHHHHHHHHHhCCCcEEEEcCCCCCCCCc
Q psy4717 39 TEDVEKVVQVAHDHNLVIIPFGGGTNVTGAV 69 (90)
Q Consensus 39 ~~~v~~vv~~a~~~~i~v~~~G~G~n~~~~~ 69 (90)
.+++++.++.+.+.+.-.+.+||.|+++.+.
T Consensus 97 ~~~i~~~v~~~l~~g~~pi~lGGdHsit~~~ 127 (313)
T 1gq6_A 97 IDTAQSHLSGLLKANAAFLMIGGDHSLTVAA 127 (313)
T ss_dssp HHHHHHHHHHHHHHSSEEEEEESCGGGHHHH
T ss_pred HHHHHHHHHHHHhCCCEEEEeCCcchhhHHH
Confidence 4556666666667788888899999987544
No 366
>2cy8_A D-phgat, D-phenylglycine aminotransferase; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; 2.30A {Pseudomonas stutzeri}
Probab=29.49 E-value=50 Score=23.36 Aligned_cols=22 Identities=14% Similarity=0.080 Sum_probs=19.0
Q ss_pred CCHHHHHHHHHHHHhCCCcEEE
Q psy4717 37 ESTEDVEKVVQVAHDHNLVIIP 58 (90)
Q Consensus 37 ~s~~~v~~vv~~a~~~~i~v~~ 58 (90)
.+.+.++++.++|+++++.++.
T Consensus 219 ~~~~~l~~l~~l~~~~g~~lI~ 240 (453)
T 2cy8_A 219 VSDSFLREGAELARQYGALFIL 240 (453)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEE
T ss_pred CCHHHHHHHHHHHHHcCCEEEE
Confidence 3678899999999999998765
No 367
>2v5c_A O-GLCNACASE NAGJ; glycosidase, GH84, GH84C, hydrolase, coiled coil, family 84 glycoside hydrolase, carbohydrate binding module; 2.10A {Clostridium perfringens} PDB: 2cbj_A* 2cbi_A 2vur_A* 2x0y_A* 2j62_A* 2wb5_A* 2xpk_A* 2yds_A* 2ydr_A* 2ydq_A*
Probab=29.24 E-value=45 Score=25.82 Aligned_cols=20 Identities=0% Similarity=0.321 Sum_probs=18.4
Q ss_pred CHHHHHHHHHHHHhCCCcEE
Q psy4717 38 STEDVEKVVQVAHDHNLVII 57 (90)
Q Consensus 38 s~~~v~~vv~~a~~~~i~v~ 57 (90)
..+|+++++++|++.||.|+
T Consensus 205 ~~~~i~elv~yA~~rgI~vv 224 (594)
T 2v5c_A 205 EMQRMQELINASAENKVDFV 224 (594)
T ss_dssp GHHHHHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHHHHHHCCcEEE
Confidence 36799999999999999998
No 368
>1toa_A Tromp-1, protein (periplasmic binding protein TROA); zinc binding protein, ABC trans binding protein; 1.80A {Treponema pallidum} SCOP: c.92.2.2 PDB: 1k0f_A
Probab=29.22 E-value=71 Score=22.28 Aligned_cols=29 Identities=14% Similarity=0.185 Sum_probs=24.7
Q ss_pred cCCHHHHHHHHHHHHhCCCcEEEEcCCCC
Q psy4717 36 TESTEDVEKVVQVAHDHNLVIIPFGGGTN 64 (90)
Q Consensus 36 P~s~~~v~~vv~~a~~~~i~v~~~G~G~n 64 (90)
.-|..+++++++.+++++++++..-...+
T Consensus 229 eps~~~l~~l~~~ik~~~v~~If~e~~~~ 257 (313)
T 1toa_A 229 EASAHDMQELAAFIAQRKLPAIFIESSIP 257 (313)
T ss_dssp CCCHHHHHHHHHHHHHTTCSEEEEETTSC
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEeCCCC
Confidence 35889999999999999999998866554
No 369
>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}
Probab=29.18 E-value=38 Score=23.50 Aligned_cols=20 Identities=20% Similarity=0.403 Sum_probs=17.8
Q ss_pred HHHHHHHHHHHHhCCCcEEE
Q psy4717 39 TEDVEKVVQVAHDHNLVIIP 58 (90)
Q Consensus 39 ~~~v~~vv~~a~~~~i~v~~ 58 (90)
.+++.+++++|+++++.++.
T Consensus 191 ~~~l~~l~~~~~~~~~~li~ 210 (412)
T 2x5d_A 191 LDFFERVVALAKQYDVMVVH 210 (412)
T ss_dssp HHHHHHHHHHHHHHTCEEEE
T ss_pred HHHHHHHHHHHHHcCCEEEE
Confidence 58999999999999988776
No 370
>1vef_A Acetylornithine/acetyl-lysine aminotransferase; PLP, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: PLP; 1.35A {Thermus thermophilus} SCOP: c.67.1.4 PDB: 1wkg_A* 1wkh_A*
Probab=29.12 E-value=39 Score=23.21 Aligned_cols=21 Identities=10% Similarity=0.256 Sum_probs=18.3
Q ss_pred CHHHHHHHHHHHHhCCCcEEE
Q psy4717 38 STEDVEKVVQVAHDHNLVIIP 58 (90)
Q Consensus 38 s~~~v~~vv~~a~~~~i~v~~ 58 (90)
+.++++++.++|+++++.++.
T Consensus 204 ~~~~l~~i~~l~~~~~~~li~ 224 (395)
T 1vef_A 204 TPEFLRAAREITQEKGALLIL 224 (395)
T ss_dssp CHHHHHHHHHHHHHHTCEEEE
T ss_pred CHHHHHHHHHHHHHcCCEEEE
Confidence 467799999999999998876
No 371
>4gnr_A ABC transporter substrate-binding protein-branche amino acid transport; amino acid-binding protein, surface-exposed protein; HET: MLY; 1.00A {Streptococcus pneumoniae}
Probab=28.86 E-value=51 Score=22.19 Aligned_cols=33 Identities=15% Similarity=0.124 Sum_probs=27.9
Q ss_pred CccEEEEcCCHHHHHHHHHHHHhCCCcEEEEcC
Q psy4717 29 GTRYWCITESTEDVEKVVQVAHDHNLVIIPFGG 61 (90)
Q Consensus 29 ~p~~vv~P~s~~~v~~vv~~a~~~~i~v~~~G~ 61 (90)
.|++|+.+....+...+++-+++.|+....+++
T Consensus 196 ~~d~v~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 228 (353)
T 4gnr_A 196 DFDAIVVPGYYNEAGKIVNQARGMGIDKPIVGG 228 (353)
T ss_dssp CCSEEECCSCHHHHHHHHHHHHHTTCCSCEEEC
T ss_pred CCCEEEEecCcHHHHHHHHHHHHcCCCCcEEEe
Confidence 499999999999999999999999876544543
No 372
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=28.78 E-value=53 Score=20.89 Aligned_cols=31 Identities=13% Similarity=0.283 Sum_probs=24.0
Q ss_pred cCccEEEEcCCH--HHHHHHHHHHHhCCCcEEE
Q psy4717 28 IGTRYWCITEST--EDVEKVVQVAHDHNLVIIP 58 (90)
Q Consensus 28 ~~p~~vv~P~s~--~~v~~vv~~a~~~~i~v~~ 58 (90)
.+++.++.+... +++.++++.|+++++++.+
T Consensus 76 ~Gad~v~v~~~~~~~~~~~~~~~~~~~g~~~~v 108 (211)
T 3f4w_A 76 AGADYVTVLGVTDVLTIQSCIRAAKEAGKQVVV 108 (211)
T ss_dssp TTCSEEEEETTSCHHHHHHHHHHHHHHTCEEEE
T ss_pred cCCCEEEEeCCCChhHHHHHHHHHHHcCCeEEE
Confidence 347777777654 7789999999999988775
No 373
>1ajs_A Aspartate aminotransferase; PIG, in the presence of ligand 2-methylaspartate; HET: LLP PLA; 1.60A {Sus scrofa} SCOP: c.67.1.1 PDB: 1ajr_A* 3ii0_A* 1aat_A 2cst_A*
Probab=28.77 E-value=39 Score=23.33 Aligned_cols=21 Identities=14% Similarity=0.142 Sum_probs=18.4
Q ss_pred CHHHHHHHHHHHHhCCCcEEE
Q psy4717 38 STEDVEKVVQVAHDHNLVIIP 58 (90)
Q Consensus 38 s~~~v~~vv~~a~~~~i~v~~ 58 (90)
+.+++.+++++|+++++.++.
T Consensus 201 ~~~~l~~l~~~~~~~~~~li~ 221 (412)
T 1ajs_A 201 TPEQWKQIASVMKRRFLFPFF 221 (412)
T ss_dssp CHHHHHHHHHHHHHHTCEEEE
T ss_pred CHHHHHHHHHHHHHCCCEEEE
Confidence 458999999999999998776
No 374
>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1
Probab=28.76 E-value=40 Score=23.36 Aligned_cols=20 Identities=15% Similarity=0.459 Sum_probs=17.8
Q ss_pred HHHHHHHHHHHHhCCCcEEE
Q psy4717 39 TEDVEKVVQVAHDHNLVIIP 58 (90)
Q Consensus 39 ~~~v~~vv~~a~~~~i~v~~ 58 (90)
.+++.+++++|+++++.++.
T Consensus 193 ~~~l~~i~~~a~~~~~~li~ 212 (406)
T 1xi9_A 193 KKTLEEILNIAGEYEIPVIS 212 (406)
T ss_dssp HHHHHHHHHHHHHHTCCEEE
T ss_pred HHHHHHHHHHHHHcCCEEEE
Confidence 58999999999999988776
No 375
>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1
Probab=28.67 E-value=40 Score=23.25 Aligned_cols=20 Identities=35% Similarity=0.483 Sum_probs=17.8
Q ss_pred HHHHHHHHHHHHhCCCcEEE
Q psy4717 39 TEDVEKVVQVAHDHNLVIIP 58 (90)
Q Consensus 39 ~~~v~~vv~~a~~~~i~v~~ 58 (90)
.+++.+++++|+++++.++.
T Consensus 193 ~~~l~~l~~~~~~~~~~li~ 212 (389)
T 1o4s_A 193 REFLEGLVRLAKKRNFYIIS 212 (389)
T ss_dssp HHHHHHHHHHHHHHTCEEEE
T ss_pred HHHHHHHHHHHHHcCCEEEE
Confidence 58999999999999988776
No 376
>3on1_A BH2414 protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, unknown function; HET: MSE; 1.65A {Bacillus halodurans}
Probab=28.67 E-value=60 Score=18.70 Aligned_cols=33 Identities=6% Similarity=0.111 Sum_probs=25.8
Q ss_pred CccEEEEcCCHH--HHHHHHHHHHhCCCcEEEEcC
Q psy4717 29 GTRYWCITESTE--DVEKVVQVAHDHNLVIIPFGG 61 (90)
Q Consensus 29 ~p~~vv~P~s~~--~v~~vv~~a~~~~i~v~~~G~ 61 (90)
.+..|+..++.+ -...+..+|.++++|++..+.
T Consensus 34 ka~lViiA~D~~~~~~~~i~~~c~~~~ip~~~~~s 68 (101)
T 3on1_A 34 QVTLVILSSDAGIHTKKKLLDKCGSYQIPVKVVGN 68 (101)
T ss_dssp CCSEEEEETTSCHHHHHHHHHHHHHHTCCEEEESC
T ss_pred CCcEEEEeCCCCHHHHHHHHHHHHHcCCCEEEeCC
Confidence 377888887764 467788889999999987754
No 377
>2xbl_A Phosphoheptose isomerase; capsule; HET: M7P PGE PG4; 1.62A {Burkholderia pseudomallei} PDB: 2x3y_A
Probab=28.62 E-value=56 Score=20.33 Aligned_cols=26 Identities=12% Similarity=0.298 Sum_probs=22.1
Q ss_pred cCCHHHHHHHHHHHHhCCCcEEEEcC
Q psy4717 36 TESTEDVEKVVQVAHDHNLVIIPFGG 61 (90)
Q Consensus 36 P~s~~~v~~vv~~a~~~~i~v~~~G~ 61 (90)
.....++.++++.|++.|.+++.+.+
T Consensus 126 SG~t~~~~~~~~~ak~~g~~vI~IT~ 151 (198)
T 2xbl_A 126 SGKSPNILAAFREAKAKGMTCVGFTG 151 (198)
T ss_dssp SSCCHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCCHHHHHHHHHHHHCCCeEEEEEC
Confidence 34558899999999999999998866
No 378
>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1
Probab=28.62 E-value=40 Score=23.33 Aligned_cols=21 Identities=29% Similarity=0.496 Sum_probs=17.9
Q ss_pred CHHHHHHHHHHHHhCCCcEEE
Q psy4717 38 STEDVEKVVQVAHDHNLVIIP 58 (90)
Q Consensus 38 s~~~v~~vv~~a~~~~i~v~~ 58 (90)
+.+++.+++++|+++++.++.
T Consensus 195 ~~~~l~~i~~~~~~~~~~li~ 215 (416)
T 1bw0_A 195 SRKHVEDIVRLAEELRLPLFS 215 (416)
T ss_dssp CHHHHHHHHHHHHHHTCCEEE
T ss_pred CHHHHHHHHHHHHHcCCEEEE
Confidence 357899999999999988775
No 379
>1xbi_A 50S ribosomal protein L7AE; alpha-beta-alpha sandwich fold, RNA binding protein/structural protein complex; HET: EPE; 1.45A {Methanocaldococcus jannaschii} SCOP: d.79.3.1 PDB: 1ra4_A* 1sds_A 3paf_A
Probab=28.60 E-value=15 Score=22.21 Aligned_cols=32 Identities=9% Similarity=0.157 Sum_probs=26.4
Q ss_pred ccEEEEcCCHHH---HHHHHHHHHhCCCcEEEEcC
Q psy4717 30 TRYWCITESTED---VEKVVQVAHDHNLVIIPFGG 61 (90)
Q Consensus 30 p~~vv~P~s~~~---v~~vv~~a~~~~i~v~~~G~ 61 (90)
+..|+..++.++ +..+..+|.++++|+...++
T Consensus 46 a~lViiA~D~~p~~~~~~l~~lc~~~~VP~~~v~s 80 (120)
T 1xbi_A 46 AKLVIIAEDVKPEEVVAHLPYLCEEKGIPYAYVAS 80 (120)
T ss_dssp CSEEEEESCCSSGGGTTTHHHHHHHHTCCEEEESC
T ss_pred ceEEEEcCCCChHHHHHHHHHHHHhcCCCEEEeCC
Confidence 788888887743 57899999999999887765
No 380
>2xhz_A KDSD, YRBH, arabinose 5-phosphate isomerase; lipopolysaccharide biogenesis; 2.60A {Escherichia coli}
Probab=28.56 E-value=54 Score=20.17 Aligned_cols=27 Identities=11% Similarity=0.293 Sum_probs=22.7
Q ss_pred cCCHHHHHHHHHHHHhCCCcEEEEcCC
Q psy4717 36 TESTEDVEKVVQVAHDHNLVIIPFGGG 62 (90)
Q Consensus 36 P~s~~~v~~vv~~a~~~~i~v~~~G~G 62 (90)
.....++.++++.|++.|.+++.+.+-
T Consensus 106 sG~t~~~~~~~~~ak~~g~~vi~IT~~ 132 (183)
T 2xhz_A 106 SGESSEITALIPVLKRLHVPLICITGR 132 (183)
T ss_dssp SSCCHHHHHHHHHHHTTTCCEEEEESC
T ss_pred CCCCHHHHHHHHHHHHCCCCEEEEECC
Confidence 355688999999999999999888663
No 381
>3qas_B Undecaprenyl pyrophosphate synthase; alpha-helix, isoprenoid biosynthesis, transferase; 1.70A {Escherichia coli} PDB: 1jp3_A* 1v7u_A* 1x06_A* 1x07_A* 2e98_A* 2e99_A* 2e9a_A* 2e9c_A* 2e9d_A* 1ueh_A 1x09_A* 1x08_A*
Probab=28.55 E-value=58 Score=22.48 Aligned_cols=20 Identities=15% Similarity=0.351 Sum_probs=17.1
Q ss_pred HHHHHHHHHHHHhCCCcEEE
Q psy4717 39 TEDVEKVVQVAHDHNLVIIP 58 (90)
Q Consensus 39 ~~~v~~vv~~a~~~~i~v~~ 58 (90)
.+.+.++++||.+.||+++-
T Consensus 47 ~~~l~~iv~~c~~~GI~~lT 66 (253)
T 3qas_B 47 AKSVRRAVSFAANNGIEALT 66 (253)
T ss_dssp HHHHHHHHHHHHHTTCSEEE
T ss_pred HHHHHHHHHHHHHCCCCEEE
Confidence 48899999999999997543
No 382
>3uhj_A Probable glycerol dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.34A {Sinorhizobium meliloti}
Probab=28.52 E-value=30 Score=25.01 Aligned_cols=27 Identities=33% Similarity=0.695 Sum_probs=20.3
Q ss_pred CHHHHHHHHHHHHhCCC-cEEEEcCCCC
Q psy4717 38 STEDVEKVVQVAHDHNL-VIIPFGGGTN 64 (90)
Q Consensus 38 s~~~v~~vv~~a~~~~i-~v~~~G~G~n 64 (90)
+.++|.++++.+++.+. -++.+|||+-
T Consensus 91 ~~~~v~~~~~~~~~~~~d~IIavGGGs~ 118 (387)
T 3uhj_A 91 CTSEIERVRKVAIEHGSDILVGVGGGKT 118 (387)
T ss_dssp SHHHHHHHHHHHHHHTCSEEEEESSHHH
T ss_pred CHHHHHHHHHHHhhcCCCEEEEeCCcHH
Confidence 56888888888887765 4677888874
No 383
>3zss_A Putative glucanohydrolase PEP1A; alpha-glucan biosynthesis, glycoside hydrolase FA; 1.80A {Streptomyces coelicolor} PDB: 3zst_A* 3zt5_A* 3zt6_A* 3zt7_A*
Probab=28.37 E-value=52 Score=25.79 Aligned_cols=22 Identities=23% Similarity=0.226 Sum_probs=20.2
Q ss_pred CCHHHHHHHHHHHHhCCCcEEE
Q psy4717 37 ESTEDVEKVVQVAHDHNLVIIP 58 (90)
Q Consensus 37 ~s~~~v~~vv~~a~~~~i~v~~ 58 (90)
.+.+|++++++.|+++||.|+.
T Consensus 318 Gt~edfk~LV~~aH~~GI~Vil 339 (695)
T 3zss_A 318 GTLDDFDHFVTEAGKLGLEIAL 339 (695)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEE
T ss_pred CCHHHHHHHHHHHHHCCCEEEE
Confidence 6889999999999999999874
No 384
>3cpq_A 50S ribosomal protein L30E; RNA-protein, elongation factor, ribonucleoprotein, structural genomics, NPPSFA; 1.90A {Methanocaldococcus jannaschii}
Probab=28.36 E-value=63 Score=18.99 Aligned_cols=32 Identities=13% Similarity=0.021 Sum_probs=25.5
Q ss_pred ccEEEEcCCH--HHHHHHHHHHHhCCCcEEEE-cC
Q psy4717 30 TRYWCITEST--EDVEKVVQVAHDHNLVIIPF-GG 61 (90)
Q Consensus 30 p~~vv~P~s~--~~v~~vv~~a~~~~i~v~~~-G~ 61 (90)
+..|+...+. +-+..+..+|.++++|++.+ ++
T Consensus 38 a~lViiA~D~~~~~~~~l~~~c~~~~Vp~~~~~~s 72 (110)
T 3cpq_A 38 GKLVVLAGNIPKDLEEDVKYYAKLSNIPVYQHKIT 72 (110)
T ss_dssp CSEEEECTTCBHHHHHHHHHHHHHTTCCEEECCSC
T ss_pred ceEEEEeCCCCHHHHHHHHHHHHHcCCCEEEEcCC
Confidence 7788887764 55678889999999998887 44
No 385
>3ckm_A YRAM (HI1655), LPOA; periplasmic-binding protein, lipoprotein, unliganded, biosynthetic protein; 1.35A {Haemophilus influenzae} SCOP: c.93.1.1
Probab=28.27 E-value=74 Score=21.41 Aligned_cols=34 Identities=6% Similarity=-0.001 Sum_probs=29.3
Q ss_pred cCccEEEEcCCHHHHHHHHHHHHhCCCcEEEEcC
Q psy4717 28 IGTRYWCITESTEDVEKVVQVAHDHNLVIIPFGG 61 (90)
Q Consensus 28 ~~p~~vv~P~s~~~v~~vv~~a~~~~i~v~~~G~ 61 (90)
..|++++.+...++...+++.+++.++..-.+++
T Consensus 176 ~~~dai~~~~~~~~~~~i~~q~~~~g~~~~~~~~ 209 (327)
T 3ckm_A 176 SNTTALYAVASPTELAEMKGYLTNIVPNLAIYAS 209 (327)
T ss_dssp TTCCEEEECCCHHHHHHHHHHHTTTCTTCEEEEC
T ss_pred cCCcEEEEEcCHHHHHHHHHHHHhhhccCCEEee
Confidence 3499999999999999999999999887666654
No 386
>2aeb_A Arginase 1; hydrolase, binuclear manganese cluster, boronic acid inhibit perfectly twinned crystal; HET: ABH; 1.29A {Homo sapiens} SCOP: c.42.1.1 PDB: 1wva_A* 2pha_A 2pho_A 2pll_A* 2zav_A 3dj8_A* 3f80_A* 3gmz_A 3gn0_A* 3kv2_A* 3lp4_A* 3lp7_A* 3mfv_A* 3mfw_A* 3mjl_A 3sjt_A* 3skk_A* 3tf3_A 3th7_A 3the_A* ...
Probab=28.27 E-value=58 Score=22.74 Aligned_cols=30 Identities=13% Similarity=0.235 Sum_probs=21.6
Q ss_pred HHHHHHHHHHHhCCCcEEEEcCCCCCCCCc
Q psy4717 40 EDVEKVVQVAHDHNLVIIPFGGGTNVTGAV 69 (90)
Q Consensus 40 ~~v~~vv~~a~~~~i~v~~~G~G~n~~~~~ 69 (90)
+.+++.++-.-+.+.-.+.+||.|+++.+.
T Consensus 78 ~~i~~~v~~~l~~g~~pi~lGGdHsit~~~ 107 (322)
T 2aeb_A 78 EQLAGKVAEVKKNGRISLVLGGDHSLAIGS 107 (322)
T ss_dssp HHHHHHHHHHHHTTCEEEEEESCGGGHHHH
T ss_pred HHHHHHHHHHHhCCCeEEEecCccccchHH
Confidence 455666666666777788899999986543
No 387
>2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6
Probab=28.27 E-value=45 Score=19.86 Aligned_cols=25 Identities=12% Similarity=0.154 Sum_probs=20.4
Q ss_pred HHHHHHHHHHHhCCCcEEEEcCCCC
Q psy4717 40 EDVEKVVQVAHDHNLVIIPFGGGTN 64 (90)
Q Consensus 40 ~~v~~vv~~a~~~~i~v~~~G~G~n 64 (90)
+++.++++.+++.++++.+.+++..
T Consensus 88 ~~~~~~l~~l~~~g~~~~i~s~~~~ 112 (207)
T 2go7_A 88 PGAREVLAWADESGIQQFIYTHKGN 112 (207)
T ss_dssp TTHHHHHHHHHHTTCEEEEECSSCT
T ss_pred cCHHHHHHHHHHCCCeEEEEeCCch
Confidence 4677888899999999999887653
No 388
>2vt1_B Surface presentation of antigens protein SPAS; specificity switch, virulence, transmembrane, inner membrane, FLHB, YSCU, T3SS, plasmid; 2.00A {Shigella flexneri} SCOP: d.367.1.1
Probab=28.25 E-value=64 Score=18.89 Aligned_cols=25 Identities=12% Similarity=0.167 Sum_probs=18.1
Q ss_pred EEcCCHHHHHHHHHHHHhCCCcEEE
Q psy4717 34 CITESTEDVEKVVQVAHDHNLVIIP 58 (90)
Q Consensus 34 v~P~s~~~v~~vv~~a~~~~i~v~~ 58 (90)
+.=..-+-..++++.|+++++|++-
T Consensus 21 vAKG~~~~A~~I~e~A~e~gVPi~e 45 (93)
T 2vt1_B 21 SLIETNQCALAVRKYANEVGIPTVR 45 (93)
T ss_dssp EEEEEHHHHHHHHHHHHHTTCCEEE
T ss_pred EEEeCcHHHHHHHHHHHHcCCCEEE
Confidence 3334445557899999999999863
No 389
>2d2r_A Undecaprenyl pyrophosphate synthase; prenyltransferase, transferase; 1.88A {Helicobacter pylori} PDB: 2dtn_A
Probab=28.21 E-value=57 Score=22.40 Aligned_cols=20 Identities=10% Similarity=0.267 Sum_probs=17.1
Q ss_pred HHHHHHHHHHHHhCCCcEEE
Q psy4717 39 TEDVEKVVQVAHDHNLVIIP 58 (90)
Q Consensus 39 ~~~v~~vv~~a~~~~i~v~~ 58 (90)
.+.+.++++||.+.||+++-
T Consensus 45 ~~~l~~iv~~c~~~GI~~lT 64 (245)
T 2d2r_A 45 VKTLKDITIWCANHKLECLT 64 (245)
T ss_dssp HHHHHHHHHHHHTTTCSEEE
T ss_pred HHHHHHHHHHHHHcCCCEEE
Confidence 48899999999999997543
No 390
>1m3s_A Hypothetical protein YCKF; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.95A {Bacillus subtilis} SCOP: c.80.1.3 PDB: 1viv_A
Probab=28.19 E-value=58 Score=20.15 Aligned_cols=26 Identities=8% Similarity=0.033 Sum_probs=22.1
Q ss_pred CCHHHHHHHHHHHHhCCCcEEEEcCC
Q psy4717 37 ESTEDVEKVVQVAHDHNLVIIPFGGG 62 (90)
Q Consensus 37 ~s~~~v~~vv~~a~~~~i~v~~~G~G 62 (90)
....++.++++.|++.|.+++.+.+-
T Consensus 90 G~t~~~~~~~~~ak~~g~~vi~IT~~ 115 (186)
T 1m3s_A 90 GETKSLIHTAAKAKSLHGIVAALTIN 115 (186)
T ss_dssp SCCHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCcHHHHHHHHHHHHCCCEEEEEECC
Confidence 44588999999999999999988663
No 391
>3trj_A Phosphoheptose isomerase; lipopolysaccharide biosynthesis; 2.80A {Francisella tularensis subsp}
Probab=28.02 E-value=45 Score=21.45 Aligned_cols=26 Identities=27% Similarity=0.518 Sum_probs=22.6
Q ss_pred cCCHHHHHHHHHHHHhCCCcEEEEcC
Q psy4717 36 TESTEDVEKVVQVAHDHNLVIIPFGG 61 (90)
Q Consensus 36 P~s~~~v~~vv~~a~~~~i~v~~~G~ 61 (90)
.....++.++++.|++.|++++.+.+
T Consensus 124 SG~t~~~~~~~~~ak~~g~~vi~iT~ 149 (201)
T 3trj_A 124 SGDSENILSAVEEAHDLEMKVIALTG 149 (201)
T ss_dssp SSCCHHHHHHHHHHHHTTCEEEEEEE
T ss_pred CCCCHHHHHHHHHHHHCCCcEEEEEC
Confidence 44578999999999999999998865
No 392
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=27.94 E-value=51 Score=23.07 Aligned_cols=20 Identities=20% Similarity=0.255 Sum_probs=17.4
Q ss_pred HHHHHHHHHHHhCCCcEEEE
Q psy4717 40 EDVEKVVQVAHDHNLVIIPF 59 (90)
Q Consensus 40 ~~v~~vv~~a~~~~i~v~~~ 59 (90)
+++.++.+.|+++|+|+++-
T Consensus 142 ~~i~~v~~~~~~~G~p~lv~ 161 (304)
T 1to3_A 142 NMVKEFNELCHSNGLLSIIE 161 (304)
T ss_dssp HHHHHHHHHHHTTTCEEEEE
T ss_pred HHHHHHHHHHHHcCCcEEEE
Confidence 78999999999999997653
No 393
>3rim_A Transketolase, TK; TPP, transferase; HET: TPP; 2.49A {Mycobacterium tuberculosis}
Probab=27.90 E-value=62 Score=25.48 Aligned_cols=30 Identities=0% Similarity=-0.250 Sum_probs=25.2
Q ss_pred cEEEEcCCHHHHHHHHHHHHhCC---CcEEEEc
Q psy4717 31 RYWCITESTEDVEKVVQVAHDHN---LVIIPFG 60 (90)
Q Consensus 31 ~~vv~P~s~~~v~~vv~~a~~~~---i~v~~~G 60 (90)
-.|+.|.+..|+..++++|-+.. -|++.+=
T Consensus 518 l~V~~Pad~~e~~~~l~~Ai~~~~~~~Pv~ir~ 550 (700)
T 3rim_A 518 LSVVRPADANETAYAWRTILARRNGSGPVGLIL 550 (700)
T ss_dssp CEEECCSSHHHHHHHHHHHHTTTTCSSCEEEEC
T ss_pred CEEEeCCCHHHHHHHHHHHHHccCCCCCEEEEe
Confidence 46899999999999999999875 4877663
No 394
>3hh8_A Metal ABC transporter substrate-binding lipoprote; lipoprotein, metal binding, cell membrane, copper transport, iron; 1.87A {Streptococcus pyogenes serotype M1} SCOP: c.92.2.2 PDB: 1psz_A 3ztt_A
Probab=27.87 E-value=49 Score=22.86 Aligned_cols=27 Identities=0% Similarity=0.037 Sum_probs=22.9
Q ss_pred CCHHHHHHHHHHHHhCCCcEEEEcCCC
Q psy4717 37 ESTEDVEKVVQVAHDHNLVIIPFGGGT 63 (90)
Q Consensus 37 ~s~~~v~~vv~~a~~~~i~v~~~G~G~ 63 (90)
-|..+++++++.+++++++++..-...
T Consensus 216 ps~~~l~~l~~~ik~~~v~~if~e~~~ 242 (294)
T 3hh8_A 216 GTPDQISSLIEKLKVIKPSALFVESSV 242 (294)
T ss_dssp CCHHHHHHHHHHHHHSCCSCEEEETTS
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeCCC
Confidence 478999999999999999988875543
No 395
>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis}
Probab=27.80 E-value=42 Score=23.08 Aligned_cols=21 Identities=29% Similarity=0.447 Sum_probs=18.3
Q ss_pred CHHHHHHHHHHHHhCCCcEEE
Q psy4717 38 STEDVEKVVQVAHDHNLVIIP 58 (90)
Q Consensus 38 s~~~v~~vv~~a~~~~i~v~~ 58 (90)
+.++++++.++|+++++.++.
T Consensus 193 ~~~~l~~i~~~~~~~~~~li~ 213 (407)
T 2zc0_A 193 SMERRKALLEIASKYDLLIIE 213 (407)
T ss_dssp CHHHHHHHHHHHHHHTCEEEE
T ss_pred CHHHHHHHHHHHHHcCCEEEE
Confidence 368999999999999988776
No 396
>3feq_A Putative amidohydrolase; unknown source, sargasso SEA, structural GEN protein structure initiative, PSI; 2.63A {Unidentified} PDB: 3lwy_A* 3n2c_A*
Probab=27.79 E-value=57 Score=22.51 Aligned_cols=25 Identities=16% Similarity=0.252 Sum_probs=21.6
Q ss_pred CCHHHHHHHHHHHHhCCCcEEEEcC
Q psy4717 37 ESTEDVEKVVQVAHDHNLVIIPFGG 61 (90)
Q Consensus 37 ~s~~~v~~vv~~a~~~~i~v~~~G~ 61 (90)
-+.+++.++++.|+++|+++..--.
T Consensus 209 ~~~e~l~~~~~~A~~~g~~v~~H~~ 233 (423)
T 3feq_A 209 YSEDEIRAIVDEAEAANTYVMAHAY 233 (423)
T ss_dssp SCHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred CCHHHHHHHHHHHHHCCCeEEEEeC
Confidence 4679999999999999999988543
No 397
>1rlg_A 50S ribosomal protein L7AE; protein-RNA, structural protein/RNA complex; HET: 5BU; 2.70A {Archaeoglobus fulgidus} SCOP: d.79.3.1
Probab=27.75 E-value=20 Score=21.51 Aligned_cols=32 Identities=16% Similarity=0.273 Sum_probs=26.5
Q ss_pred ccEEEEcCCHH--H-HHHHHHHHHhCCCcEEEEcC
Q psy4717 30 TRYWCITESTE--D-VEKVVQVAHDHNLVIIPFGG 61 (90)
Q Consensus 30 p~~vv~P~s~~--~-v~~vv~~a~~~~i~v~~~G~ 61 (90)
+..|+..++.+ + +..+..+|.++++|+...++
T Consensus 44 a~lViiA~D~~~~~~~~~l~~lc~~~~Vp~~~~~s 78 (119)
T 1rlg_A 44 AKLVYIAEDVDPPEIVAHLPLLCEEKNVPYIYVKS 78 (119)
T ss_dssp CSEEEEESCCSCSTTTTHHHHHHHHHTCCEEEESC
T ss_pred CcEEEEeCCCChHHHHHHHHHHHHHcCCCEEEeCC
Confidence 78888888874 3 68899999999999887765
No 398
>3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A*
Probab=27.67 E-value=45 Score=20.42 Aligned_cols=24 Identities=4% Similarity=-0.032 Sum_probs=20.5
Q ss_pred HHHHHHHHHHHhCCCcEEEEcCCC
Q psy4717 40 EDVEKVVQVAHDHNLVIIPFGGGT 63 (90)
Q Consensus 40 ~~v~~vv~~a~~~~i~v~~~G~G~ 63 (90)
+++.++++.+++.|+++.+.+++.
T Consensus 73 ~~~~~~l~~l~~~g~~~~i~s~~~ 96 (205)
T 3m9l_A 73 PGAVELVRELAGRGYRLGILTRNA 96 (205)
T ss_dssp TTHHHHHHHHHHTTCEEEEECSSC
T ss_pred ccHHHHHHHHHhcCCeEEEEeCCc
Confidence 357888999999999999998874
No 399
>3ln3_A Dihydrodiol dehydrogenase; putative reductase, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; HET: MLY MSE NAD; 1.18A {Mus musculus} SCOP: c.1.7.1
Probab=27.65 E-value=45 Score=23.01 Aligned_cols=18 Identities=11% Similarity=0.556 Sum_probs=15.9
Q ss_pred HHHHHHHHhCCCcEEEEc
Q psy4717 43 EKVVQVAHDHNLVIIPFG 60 (90)
Q Consensus 43 ~~vv~~a~~~~i~v~~~G 60 (90)
.+++.+|+++|+.+++++
T Consensus 201 ~~l~~~~~~~gi~v~a~s 218 (324)
T 3ln3_A 201 RXLLDYCESXDIVLVAYG 218 (324)
T ss_dssp HHHHHHHHHTTCEEEEES
T ss_pred HHHHHHHHHcCCEEEEec
Confidence 578999999999998875
No 400
>2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus}
Probab=27.62 E-value=72 Score=18.91 Aligned_cols=24 Identities=4% Similarity=0.055 Sum_probs=19.8
Q ss_pred HHHHHHHHHHhCCCcEEEEcCCCC
Q psy4717 41 DVEKVVQVAHDHNLVIIPFGGGTN 64 (90)
Q Consensus 41 ~v~~vv~~a~~~~i~v~~~G~G~n 64 (90)
+..++++.+++.|+++.+.++++.
T Consensus 40 ~~~~~l~~l~~~g~~~~i~T~~~~ 63 (162)
T 2p9j_A 40 LDGIGIKLLQKMGITLAVISGRDS 63 (162)
T ss_dssp HHHHHHHHHHTTTCEEEEEESCCC
T ss_pred cHHHHHHHHHHCCCEEEEEeCCCc
Confidence 456888889999999999988763
No 401
>3m1r_A Formimidoylglutamase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: CAC; 2.20A {Bacillus subtilis}
Probab=27.35 E-value=42 Score=23.58 Aligned_cols=35 Identities=9% Similarity=0.153 Sum_probs=24.0
Q ss_pred EcCCHH----HHHHHHHHHHhCCC--cEEEEcCCCCCCCCc
Q psy4717 35 ITESTE----DVEKVVQVAHDHNL--VIIPFGGGTNVTGAV 69 (90)
Q Consensus 35 ~P~s~~----~v~~vv~~a~~~~i--~v~~~G~G~n~~~~~ 69 (90)
.|.+.+ .+++.++-+-+.+. -.+.+||+|+++.+.
T Consensus 96 ~~~~~~~~~~~i~~~v~~~l~~g~~~~pi~lGGdHsit~~~ 136 (322)
T 3m1r_A 96 HVTDIVKSHHHIFQTMHALLSDHPDWVPLILGGDNSISYST 136 (322)
T ss_dssp CSSCHHHHHHHHHHHHHHHHHHCTTEEEEEEESCTTHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHhcCCCceeEEeCCCccccHHH
Confidence 355554 45666666666777 778899999986544
No 402
>1w41_A 50S ribosomal protein L30E; electrostatic interactions, thermostability, protein engineering; 1.7A {Thermococcus celer} SCOP: d.79.3.1 PDB: 3n4y_A 3lfo_A 1w40_A 1go0_A 1go1_A 1h7m_A 1w42_A 1w3e_X 3ra6_A 3ra5_A 3n4z_A 2bo1_A
Probab=27.33 E-value=66 Score=18.49 Aligned_cols=32 Identities=13% Similarity=0.208 Sum_probs=24.2
Q ss_pred ccEEEEcCC--HHHHHHHHHHHHhCCCcEEEE-cC
Q psy4717 30 TRYWCITES--TEDVEKVVQVAHDHNLVIIPF-GG 61 (90)
Q Consensus 30 p~~vv~P~s--~~~v~~vv~~a~~~~i~v~~~-G~ 61 (90)
+..|+..++ .+-+..+..+|.++++|++.+ ++
T Consensus 33 a~lViiA~D~~~~~~~~l~~~c~~~~vp~~~~~~s 67 (101)
T 1w41_A 33 AKLIIVARNARPDIKEDIEYYARLSGIPVYEFEGT 67 (101)
T ss_dssp CSEEEEETTSCHHHHHHHHHHHHHHTCCEEEESSC
T ss_pred CcEEEEeCCCCHHHHHHHHHHHHhcCCCEEEecCC
Confidence 666776665 455677888999999998876 44
No 403
>3ihj_A Alanine aminotransferase 2; helix, structural genomics, structural genomics consortium, pyridoxal phosphate; HET: PLP; 2.30A {Homo sapiens}
Probab=27.28 E-value=41 Score=24.56 Aligned_cols=20 Identities=20% Similarity=0.473 Sum_probs=17.2
Q ss_pred HHHHHHHHHHHHhCCCcEEE
Q psy4717 39 TEDVEKVVQVAHDHNLVIIP 58 (90)
Q Consensus 39 ~~~v~~vv~~a~~~~i~v~~ 58 (90)
.+++.+++++|+++++.++.
T Consensus 254 ~~~l~~i~~la~~~~~~li~ 273 (498)
T 3ihj_A 254 RKCIEDVIHFAWEEKLFLLA 273 (498)
T ss_dssp HHHHHHHHHHHHHHTCEEEE
T ss_pred HHHHHHHHHHHHHcCcEEEE
Confidence 48999999999999887664
No 404
>3o3r_A Aldo-keto reductase family 1, member B7; aldose reductase like protein, AKR1B14, oxidoreductase; HET: NAP; 1.86A {Rattus norvegicus} SCOP: c.1.7.1 PDB: 3qkz_A*
Probab=27.24 E-value=44 Score=23.00 Aligned_cols=18 Identities=28% Similarity=0.687 Sum_probs=15.9
Q ss_pred HHHHHHHHhCCCcEEEEc
Q psy4717 43 EKVVQVAHDHNLVIIPFG 60 (90)
Q Consensus 43 ~~vv~~a~~~~i~v~~~G 60 (90)
.+++.+|+++|+.+++++
T Consensus 194 ~~l~~~~~~~gi~v~a~s 211 (316)
T 3o3r_A 194 EKLIQYCHSKGIAVIAYS 211 (316)
T ss_dssp HHHHHHHHTTTCEEEEEC
T ss_pred HHHHHHHHHcCCEEEEec
Confidence 589999999999988874
No 405
>2r8c_A Putative amidohydrolase; unknown source, sargasso SEA, structural genomics, protein structure initiative, PSI; 2.31A {Unidentified} PDB: 3mkv_A*
Probab=27.14 E-value=59 Score=22.70 Aligned_cols=26 Identities=12% Similarity=0.208 Sum_probs=22.5
Q ss_pred CCHHHHHHHHHHHHhCCCcEEEEcCC
Q psy4717 37 ESTEDVEKVVQVAHDHNLVIIPFGGG 62 (90)
Q Consensus 37 ~s~~~v~~vv~~a~~~~i~v~~~G~G 62 (90)
-+.+++.++++.|++.|+++..--.+
T Consensus 212 ~~~e~l~~~~~~A~~~g~~v~~H~~~ 237 (426)
T 2r8c_A 212 YSEDEIRAIVAEAQGRGTYVLAHAYT 237 (426)
T ss_dssp SCHHHHHHHHHHHHHTTCCEEEEECS
T ss_pred CCHHHHHHHHHHHHHcCCEEEEEeCC
Confidence 47899999999999999999886553
No 406
>4hqf_A Thrombospondin-related anonymous protein, trap; malaria, parasite motility, I domain, TSR domain, receptor O sporozoite, vaccine target; 2.20A {Plasmodium falciparum} PDB: 4hqk_A 2bbx_A
Probab=27.00 E-value=77 Score=21.11 Aligned_cols=30 Identities=27% Similarity=0.358 Sum_probs=25.3
Q ss_pred cCCHHHHHHHHHHHHhCCCcEEEEcCCCCC
Q psy4717 36 TESTEDVEKVVQVAHDHNLVIIPFGGGTNV 65 (90)
Q Consensus 36 P~s~~~v~~vv~~a~~~~i~v~~~G~G~n~ 65 (90)
+.+.+++.+.++.+++.++.++.+|=|...
T Consensus 140 ~~d~~~~~~~~~~l~~~gv~i~~igiG~~~ 169 (281)
T 4hqf_A 140 PDSIQDSLKESRKLSDRGVKIAVFGIGQGI 169 (281)
T ss_dssp CSCHHHHHHHHHHHHHTTCEEEEEEESSSC
T ss_pred CCCcHHHHHHHHHHHHCCCEEEEEeCCCcc
Confidence 445668999999999999999999988753
No 407
>3iz5_f 60S ribosomal protein L30 (L30E); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 3izr_f
Probab=26.95 E-value=1e+02 Score=18.29 Aligned_cols=30 Identities=7% Similarity=0.088 Sum_probs=25.5
Q ss_pred ccEEEEcCCHHH--HHHHHHHHHhCCCcEEEE
Q psy4717 30 TRYWCITESTED--VEKVVQVAHDHNLVIIPF 59 (90)
Q Consensus 30 p~~vv~P~s~~~--v~~vv~~a~~~~i~v~~~ 59 (90)
+..|+..++..+ ...+..+|..+++|++-+
T Consensus 43 akLVilA~D~~~~~~~~i~~~c~~~~ipv~~~ 74 (112)
T 3iz5_f 43 GKLIILANNCPPLRKSEIETYAMLAKISVHHF 74 (112)
T ss_dssp CSEEEECSCCCHHHHHHHHHHHHHTTCCEECC
T ss_pred ceEEEEeCCCCHHHHHHHHHHHHHcCCcEEEe
Confidence 888888888644 677888999999999988
No 408
>3o85_A Ribosomal protein L7AE; alpha beta sandwich fold, K-turn RNA binding protein, KINK T ribosomal protein; 1.81A {Giardia lamblia}
Probab=26.78 E-value=25 Score=21.43 Aligned_cols=32 Identities=13% Similarity=0.188 Sum_probs=26.7
Q ss_pred ccEEEEcCCHHH---HHHHHHHHHhCCCcEEEEcC
Q psy4717 30 TRYWCITESTED---VEKVVQVAHDHNLVIIPFGG 61 (90)
Q Consensus 30 p~~vv~P~s~~~---v~~vv~~a~~~~i~v~~~G~ 61 (90)
+..|+..++.++ +..+..+|.++++|+...++
T Consensus 48 a~lViiA~D~~p~~~~~~l~~lc~~~~VP~~~v~s 82 (122)
T 3o85_A 48 AELVIIAADADPIEIVLHLPLACEDKGVPYVFIGS 82 (122)
T ss_dssp CSEEEEETTCSSGGGGTTHHHHHHTTTCCEEEESC
T ss_pred ceEEEEeCCCChHHHHHHHHHHHHHhCCCEEEECC
Confidence 888888888853 47888999999999887765
No 409
>3lfx_A Uncharacterized protein; CAS1, DNAse, prokaryotic immune system, structural genomics, protein structure initiative; 2.70A {Thermotoga maritima}
Probab=26.74 E-value=42 Score=23.62 Aligned_cols=32 Identities=9% Similarity=0.138 Sum_probs=24.5
Q ss_pred CHHHHHHHHHHHHhCCCcEEEEcCCCCCCCCc
Q psy4717 38 STEDVEKVVQVAHDHNLVIIPFGGGTNVTGAV 69 (90)
Q Consensus 38 s~~~v~~vv~~a~~~~i~v~~~G~G~n~~~~~ 69 (90)
.+.==.+++++|.++|+++..++.+....+..
T Consensus 43 ~v~is~~~l~~l~~~gi~v~f~~~~G~~~g~~ 74 (319)
T 3lfx_A 43 EVDLNKRFLEFLSQKRIPIHFFNREGYYVGTF 74 (319)
T ss_dssp CEEEEHHHHHHHHHTTCCEEEECTTCCEEEEE
T ss_pred CCCCCHHHHHHHHHCCCeEEEECCCCCEEEEE
Confidence 33333689999999999999999876665444
No 410
>2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A
Probab=26.72 E-value=35 Score=21.07 Aligned_cols=24 Identities=8% Similarity=0.037 Sum_probs=20.5
Q ss_pred HHHHHHHHHHHhCCCcEEEEcCCC
Q psy4717 40 EDVEKVVQVAHDHNLVIIPFGGGT 63 (90)
Q Consensus 40 ~~v~~vv~~a~~~~i~v~~~G~G~ 63 (90)
+.+.++++.+++.|+++.+.++++
T Consensus 71 ~g~~e~L~~L~~~G~~v~ivT~~~ 94 (187)
T 2wm8_A 71 PEVPEVLKRLQSLGVPGAAASRTS 94 (187)
T ss_dssp TTHHHHHHHHHHHTCCEEEEECCS
T ss_pred hhHHHHHHHHHHCCceEEEEeCCC
Confidence 457788888889999999999886
No 411
>3m0z_A Putative aldolase; MCSG, PSI-2, structural genomics, protein structure initiative, midwest center for structural genomics, lyase; HET: MSE; 1.20A {Klebsiella pneumoniae subsp} PDB: 3nzr_A 3lm7_A
Probab=26.70 E-value=74 Score=22.11 Aligned_cols=25 Identities=24% Similarity=0.502 Sum_probs=20.1
Q ss_pred CCHHHHHHHHHHHHhCCCcEEEEcC
Q psy4717 37 ESTEDVEKVVQVAHDHNLVIIPFGG 61 (90)
Q Consensus 37 ~s~~~v~~vv~~a~~~~i~v~~~G~ 61 (90)
++.+|+.++.+.|.++++-+=|-||
T Consensus 171 ~~l~E~~avAka~a~~g~~lEPTGG 195 (249)
T 3m0z_A 171 KHRAEFEAVAKACAAHDFWLEPTGG 195 (249)
T ss_dssp TTHHHHHHHHHHHHHTTCEEEEBSS
T ss_pred ccHHHHHHHHHHHHHcCceECCCCC
Confidence 6789999999999999995556544
No 412
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=26.63 E-value=63 Score=21.52 Aligned_cols=31 Identities=13% Similarity=0.192 Sum_probs=22.5
Q ss_pred CccEE---EEcCCH------HHHHHHHHHHHhCCCcEEEE
Q psy4717 29 GTRYW---CITEST------EDVEKVVQVAHDHNLVIIPF 59 (90)
Q Consensus 29 ~p~~v---v~P~s~------~~v~~vv~~a~~~~i~v~~~ 59 (90)
+++.| +...+. +++.++++.|++.++++++.
T Consensus 112 Ga~~v~~~l~~~~~~~~~~~~~~~~v~~~~~~~g~~viv~ 151 (273)
T 2qjg_A 112 GADAVSIHVNVGSDEDWEAYRDLGMIAETCEYWGMPLIAM 151 (273)
T ss_dssp TCSEEEEEEEETSTTHHHHHHHHHHHHHHHHHHTCCEEEE
T ss_pred CCCEEEEEEecCCCCHHHHHHHHHHHHHHHHHcCCCEEEE
Confidence 46666 445543 46888999999999998874
No 413
>2h6r_A Triosephosphate isomerase; beta-alpha barrel; 2.30A {Methanocaldococcus jannaschii}
Probab=26.62 E-value=78 Score=20.77 Aligned_cols=32 Identities=25% Similarity=0.269 Sum_probs=25.7
Q ss_pred cCccEEEEcCC-----HHHHHHHHHHHHhCCCcEEEE
Q psy4717 28 IGTRYWCITES-----TEDVEKVVQVAHDHNLVIIPF 59 (90)
Q Consensus 28 ~~p~~vv~P~s-----~~~v~~vv~~a~~~~i~v~~~ 59 (90)
.++++|..+.+ .+++.+.++.|.++|+.+++.
T Consensus 81 ~Gad~Vll~~ser~l~~~e~~~~~~~a~~~Gl~~iv~ 117 (219)
T 2h6r_A 81 CGCKGTLINHSEKRMLLADIEAVINKCKNLGLETIVC 117 (219)
T ss_dssp HTCCEEEESBTTBCCBHHHHHHHHHHHHHHTCEEEEE
T ss_pred cCCCEEEECCccccCCHHHHHHHHHHHHHCCCeEEEE
Confidence 45899999887 578999999999999855543
No 414
>1v77_A PH1877P, hypothetical protein PH1877; RNAse P protein, TIM-barrel, RNA binding protein; 1.80A {Pyrococcus horikoshii} SCOP: c.6.3.2 PDB: 2czv_A*
Probab=26.60 E-value=51 Score=21.54 Aligned_cols=28 Identities=4% Similarity=-0.131 Sum_probs=23.3
Q ss_pred HHHHHHHHHHHHhCCCcEEEEcCCCCCC
Q psy4717 39 TEDVEKVVQVAHDHNLVIIPFGGGTNVT 66 (90)
Q Consensus 39 ~~~v~~vv~~a~~~~i~v~~~G~G~n~~ 66 (90)
.+-..+++++|+++++|++.=+..|...
T Consensus 146 ~~~~~~il~l~k~~g~~ivisSDAh~~~ 173 (212)
T 1v77_A 146 LRFMMKAWKLVEKYKVRRFLTSSAQEKW 173 (212)
T ss_dssp HHHHHHHHHHHHHHTCCEEEECCCSSGG
T ss_pred HHHHHHHHHHHHhcCCCEEEeCCCCChh
Confidence 4556789999999999999988888763
No 415
>4f40_A Prostaglandin F2-alpha synthase/D-arabinose dehyd; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: CIT; 1.60A {Leishmania major} PDB: 4g5d_A*
Probab=26.51 E-value=50 Score=22.51 Aligned_cols=18 Identities=0% Similarity=0.148 Sum_probs=15.9
Q ss_pred HHHHHHHHhCCCcEEEEc
Q psy4717 43 EKVVQVAHDHNLVIIPFG 60 (90)
Q Consensus 43 ~~vv~~a~~~~i~v~~~G 60 (90)
.+++++|+++|+.+++++
T Consensus 185 ~~l~~~~~~~gi~v~a~s 202 (288)
T 4f40_A 185 ADLRAFCDAKQIKVEAWS 202 (288)
T ss_dssp HHHHHHHHHTTCEEEEES
T ss_pred HHHHHHHHHCCCEEEEec
Confidence 468999999999999885
No 416
>1ji1_A Alpha-amylase I; beta/alpha barrel, hydrolase; 1.60A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1uh3_A* 2d0f_A* 1izj_A 1uh4_A* 1uh2_A* 2d0g_A* 2d0h_A* 1izk_A
Probab=26.48 E-value=52 Score=25.07 Aligned_cols=22 Identities=9% Similarity=0.197 Sum_probs=19.7
Q ss_pred CCHHHHHHHHHHHHhCC--C--cEEE
Q psy4717 37 ESTEDVEKVVQVAHDHN--L--VIIP 58 (90)
Q Consensus 37 ~s~~~v~~vv~~a~~~~--i--~v~~ 58 (90)
.+.+|++++|+.|+++| | .|+.
T Consensus 236 Gt~~dfk~LV~~~H~~G~~I~~~VIl 261 (637)
T 1ji1_A 236 GDNSTLQTLINDIHSTANGPKGYLIL 261 (637)
T ss_dssp CCHHHHHHHHHHHHCSSSSSCCEEEE
T ss_pred CCHHHHHHHHHHHHhCCCCccceEEE
Confidence 47899999999999999 9 8765
No 417
>3t7y_A YOP proteins translocation protein U; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta; 2.10A {Chlamydia trachomatis} SCOP: d.367.1.0
Probab=26.47 E-value=32 Score=20.37 Aligned_cols=21 Identities=10% Similarity=0.188 Sum_probs=16.6
Q ss_pred CCHHHHHHHHHHHHhCCCcEE
Q psy4717 37 ESTEDVEKVVQVAHDHNLVII 57 (90)
Q Consensus 37 ~s~~~v~~vv~~a~~~~i~v~ 57 (90)
..-+-..++++.|+++|+|+.
T Consensus 39 G~~~~A~~I~~~A~e~gVPi~ 59 (97)
T 3t7y_A 39 GVNLRAKRIIAEAEKYGVPIM 59 (97)
T ss_dssp EEHHHHHHHHHHHHHHTCCEE
T ss_pred eCcHHHHHHHHHHHHcCCeEE
Confidence 344555789999999999986
No 418
>3pkz_A Recombinase SIN; small serine recombinase, resolvase, DNA, recombination; 1.80A {Staphylococcus aureus}
Probab=26.37 E-value=66 Score=18.98 Aligned_cols=26 Identities=12% Similarity=0.106 Sum_probs=22.8
Q ss_pred CCHHHHHHHHHHHHhCCCcEEEEcCC
Q psy4717 37 ESTEDVEKVVQVAHDHNLVIIPFGGG 62 (90)
Q Consensus 37 ~s~~~v~~vv~~a~~~~i~v~~~G~G 62 (90)
++..|+..+++.+.++|+.++....+
T Consensus 69 R~~~~~~~~~~~l~~~gv~l~~~~~~ 94 (124)
T 3pkz_A 69 RNYNEVIHTVNYLKDKEVQLMITSLP 94 (124)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEETTCG
T ss_pred CCHHHHHHHHHHHHHCCCEEEEecCC
Confidence 47899999999999999999987655
No 419
>3glc_A Aldolase LSRF; TIM barrel, lyase, schiff base; HET: R5P; 2.50A {Escherichia coli} PDB: 3gnd_A* 3gkf_O
Probab=26.30 E-value=57 Score=22.89 Aligned_cols=22 Identities=9% Similarity=0.221 Sum_probs=18.6
Q ss_pred CHHHHHHHHHHHHhCCCcEEEE
Q psy4717 38 STEDVEKVVQVAHDHNLVIIPF 59 (90)
Q Consensus 38 s~~~v~~vv~~a~~~~i~v~~~ 59 (90)
..+++.++++.|+++++|++..
T Consensus 156 ~l~~i~~v~~~a~~~GlpvIie 177 (295)
T 3glc_A 156 SIKNIIQLVDAGMKVGMPTMAV 177 (295)
T ss_dssp HHHHHHHHHHHHHTTTCCEEEE
T ss_pred HHHHHHHHHHHHHHcCCEEEEE
Confidence 3467889999999999999885
No 420
>1pix_A Glutaconyl-COA decarboxylase A subunit; biotin-dependent ION pump, carboxyltransferase, lyase; 2.20A {Acidaminococcus fermentans} SCOP: c.14.1.4 c.14.1.4
Probab=26.26 E-value=38 Score=26.20 Aligned_cols=29 Identities=10% Similarity=0.036 Sum_probs=25.6
Q ss_pred EEEEcCCHHHHHHHHHHHHhCCCcEEEEc
Q psy4717 32 YWCITESTEDVEKVVQVAHDHNLVIIPFG 60 (90)
Q Consensus 32 ~vv~P~s~~~v~~vv~~a~~~~i~v~~~G 60 (90)
-++.|.+....++.+++|.+.++|++.+=
T Consensus 385 G~l~~~~a~Kaarfi~~c~~~~iPlv~lv 413 (587)
T 1pix_A 385 GKLYRQGLVKMNEFVTLCARDRLPIVWIQ 413 (587)
T ss_dssp TEECHHHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CCcCHHHHHHHHHHHHHhhcCCCCeEEEe
Confidence 46778889999999999999999999873
No 421
>2fts_A Gephyrin; gephyrin, neuroreceptor anchoring, structu protein; 2.41A {Rattus norvegicus} SCOP: b.85.6.1 b.103.1.1 c.57.1.2 PDB: 2fu3_A 1t3e_A
Probab=26.23 E-value=1e+02 Score=22.54 Aligned_cols=35 Identities=11% Similarity=0.206 Sum_probs=28.7
Q ss_pred cEEEEcCCHHHHHHHHHHHHhCCCcEEEEcCCCCCC
Q psy4717 31 RYWCITESTEDVEKVVQVAHDHNLVIIPFGGGTNVT 66 (90)
Q Consensus 31 ~~vv~P~s~~~v~~vv~~a~~~~i~v~~~G~G~n~~ 66 (90)
...+.|.+.+++.+.++.+.+. .-+++..||++..
T Consensus 226 ~~~iv~Dd~~~i~~~l~~a~~~-~DlVittGG~s~g 260 (419)
T 2fts_A 226 NLGIVGDNPDDLLNALNEGISR-ADVIITSGGVSMG 260 (419)
T ss_dssp EEEEECSSHHHHHHHHHHHHHH-CSEEEEESCCSSS
T ss_pred EEeecCCCHHHHHHHHHHHHhc-CCEEEEcCCCcCC
Confidence 4568899999999999877653 6799999999874
No 422
>3aie_A Glucosyltransferase-SI; beta-alpha-barrels; HET: MES; 2.10A {Streptococcus mutans} PDB: 3aic_A* 3aib_A*
Probab=26.23 E-value=53 Score=26.54 Aligned_cols=22 Identities=14% Similarity=0.454 Sum_probs=20.2
Q ss_pred CCHHHHHHHHHHHHhCCCcEEE
Q psy4717 37 ESTEDVEKVVQVAHDHNLVIIP 58 (90)
Q Consensus 37 ~s~~~v~~vv~~a~~~~i~v~~ 58 (90)
.+.+|+.++|+.|+++||.|+.
T Consensus 690 Gt~~df~~lv~~~H~~GI~Vil 711 (844)
T 3aie_A 690 GTADDLVKAIKALHSKGIKVMA 711 (844)
T ss_dssp BCHHHHHHHHHHHHHTTCEEEE
T ss_pred CCHHHHHHHHHHHHHCCCEEEE
Confidence 5899999999999999999875
No 423
>1vm6_A DHPR, dihydrodipicolinate reductase; TM1520, structural genomics, protein structure initiative, PSI, joint center for structu genomics; HET: NAD PG4; 2.27A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3
Probab=26.22 E-value=51 Score=22.46 Aligned_cols=34 Identities=12% Similarity=-0.020 Sum_probs=29.2
Q ss_pred CccEEEEcCCHHHHHHHHHHHHhCCCcEEEEcCC
Q psy4717 29 GTRYWCITESTEDVEKVVQVAHDHNLVIIPFGGG 62 (90)
Q Consensus 29 ~p~~vv~P~s~~~v~~vv~~a~~~~i~v~~~G~G 62 (90)
.+++++-=++++.+.+.+++|.++++|+++-..|
T Consensus 53 ~~DVvIDFT~P~a~~~~~~~~~~~g~~~ViGTTG 86 (228)
T 1vm6_A 53 SPDVVIDFSSPEALPKTVDLCKKYRAGLVLGTTA 86 (228)
T ss_dssp CCSEEEECSCGGGHHHHHHHHHHHTCEEEECCCS
T ss_pred CCCEEEECCCHHHHHHHHHHHHHcCCCEEEeCCC
Confidence 5899998888899999999999999998885444
No 424
>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A*
Probab=26.17 E-value=45 Score=23.81 Aligned_cols=21 Identities=5% Similarity=0.368 Sum_probs=18.2
Q ss_pred CHHHHHHHHHHHHhCCCcEEE
Q psy4717 38 STEDVEKVVQVAHDHNLVIIP 58 (90)
Q Consensus 38 s~~~v~~vv~~a~~~~i~v~~ 58 (90)
+.+++++++++|+++++.++.
T Consensus 235 ~~~~l~~i~~la~~~~~~lI~ 255 (448)
T 3aow_A 235 NEDRRKYLLELASEYDFIVVE 255 (448)
T ss_dssp CHHHHHHHHHHHHHHTCEEEE
T ss_pred CHHHHHHHHHHHHHcCCEEEE
Confidence 468999999999999988765
No 425
>1xp2_A EAD500, PLY500, L-alanyl-D-glutamate peptidase; hydrolase; 1.80A {Bacteriophage A500} PDB: 2vo9_A
Probab=26.13 E-value=74 Score=20.95 Aligned_cols=27 Identities=7% Similarity=0.188 Sum_probs=22.5
Q ss_pred EcCCHHHHHHHHHHHHhCCCcEEEEcC
Q psy4717 35 ITESTEDVEKVVQVAHDHNLVIIPFGG 61 (90)
Q Consensus 35 ~P~s~~~v~~vv~~a~~~~i~v~~~G~ 61 (90)
.|.-.+.+.++++.|.+.|+.+.+.+|
T Consensus 34 dp~~a~al~~m~~aA~~~Gi~l~v~sG 60 (179)
T 1xp2_A 34 YKITSDKTRNVIKKMAKEGIYLCVAQG 60 (179)
T ss_dssp CHHHHHHHHHHHHHHHTTTCCEEEEEC
T ss_pred CHHHHHHHHHHHHHHHHcCCeEEEEEe
Confidence 344568899999999999999998766
No 426
>2cjg_A L-lysine-epsilon aminotransferase; internal aldimine, pyridoxal phosphate, PLP, RV3290C, lysine amino transferase; HET: PMP; 1.95A {Mycobacterium tuberculosis} PDB: 2cjd_A* 2cin_A* 2cjh_A* 2jjg_A* 2jje_A* 2jjh_A* 2jjf_A
Probab=26.05 E-value=71 Score=22.72 Aligned_cols=24 Identities=8% Similarity=0.036 Sum_probs=20.0
Q ss_pred cCCHHHHHHHHHHHHhCCCcEEEE
Q psy4717 36 TESTEDVEKVVQVAHDHNLVIIPF 59 (90)
Q Consensus 36 P~s~~~v~~vv~~a~~~~i~v~~~ 59 (90)
+-+.+.++++.++|+++++.++.=
T Consensus 248 ~~~~~~l~~l~~l~~~~g~lli~D 271 (449)
T 2cjg_A 248 HFRPEFFAAMRELCDEFDALLIFD 271 (449)
T ss_dssp ECCHHHHHHHHHHHHHTTCEEEEE
T ss_pred cCCHHHHHHHHHHHHHCCcEEEEe
Confidence 345788999999999999887753
No 427
>1xvl_A Mn transporter, MNTC protein; manganese, ABC-type transport systems, photosynthesis, cyanobacteria, disulfide bond, metal transport; 2.90A {Synechocystis SP} SCOP: c.92.2.2
Probab=26.00 E-value=83 Score=22.04 Aligned_cols=29 Identities=14% Similarity=0.177 Sum_probs=24.7
Q ss_pred cCCHHHHHHHHHHHHhCCCcEEEEcCCCC
Q psy4717 36 TESTEDVEKVVQVAHDHNLVIIPFGGGTN 64 (90)
Q Consensus 36 P~s~~~v~~vv~~a~~~~i~v~~~G~G~n 64 (90)
.-|..+++++++.+++++++++..-...+
T Consensus 236 eps~~~l~~l~~~ik~~~v~~If~e~~~~ 264 (321)
T 1xvl_A 236 QFTPKQVQTVIEEVKTNNVPTIFCESTVS 264 (321)
T ss_dssp SCCHHHHHHHHHHHHTTTCSEEEEETTSC
T ss_pred CCCHHHHHHHHHHHHHcCCcEEEEeCCCC
Confidence 46789999999999999999988766554
No 428
>4gmf_A Yersiniabactin biosynthetic protein YBTU; rossmann fold, NADPH dependent thiazoline reductase, oxidore; HET: EPE; 1.85A {Yersinia enterocolitica subsp} PDB: 4gmg_A*
Probab=25.94 E-value=60 Score=23.23 Aligned_cols=25 Identities=8% Similarity=0.085 Sum_probs=21.3
Q ss_pred EEcCCHHHHHHHHHHHHhCCCcEEE
Q psy4717 34 CITESTEDVEKVVQVAHDHNLVIIP 58 (90)
Q Consensus 34 v~P~s~~~v~~vv~~a~~~~i~v~~ 58 (90)
=.|=+.+|..++++.|+++|+.+++
T Consensus 100 EKPl~~~ea~~l~~~A~~~g~~~~v 124 (372)
T 4gmf_A 100 EHPLHPDDISSLQTLAQEQGCCYWI 124 (372)
T ss_dssp ESCCCHHHHHHHHHHHHHHTCCEEE
T ss_pred ecCCCHHHHHHHHHHHHHcCCEEEE
Confidence 3445789999999999999999887
No 429
>2wsk_A Glycogen debranching enzyme; carbohydrate metabolism, hydrolase, glycosidase, ISO-amylase glycosyl hydrolase, glycogen metabolism; 2.25A {Escherichia coli k-12}
Probab=25.91 E-value=43 Score=25.77 Aligned_cols=21 Identities=10% Similarity=0.344 Sum_probs=19.3
Q ss_pred CHHHHHHHHHHHHhCCCcEEE
Q psy4717 38 STEDVEKVVQVAHDHNLVIIP 58 (90)
Q Consensus 38 s~~~v~~vv~~a~~~~i~v~~ 58 (90)
+.+|++++|+.|++.||.|+.
T Consensus 240 ~~~d~~~lv~~~H~~Gi~Vil 260 (657)
T 2wsk_A 240 ALDEFRDAIKALHKAGIEVIL 260 (657)
T ss_dssp HHHHHHHHHHHHHHTTCEEEE
T ss_pred CHHHHHHHHHHHHHCCCEEEE
Confidence 579999999999999999875
No 430
>3nx3_A Acoat, acetylornithine aminotransferase; csgid, structural genomics, center for structural genomics O infectious diseases; 1.80A {Campylobacter jejuni subsp}
Probab=25.85 E-value=48 Score=22.78 Aligned_cols=22 Identities=5% Similarity=0.306 Sum_probs=19.0
Q ss_pred CCHHHHHHHHHHHHhCCCcEEE
Q psy4717 37 ESTEDVEKVVQVAHDHNLVIIP 58 (90)
Q Consensus 37 ~s~~~v~~vv~~a~~~~i~v~~ 58 (90)
-+.++++++.++|+++++.++.
T Consensus 197 ~~~~~l~~l~~l~~~~~~~li~ 218 (395)
T 3nx3_A 197 ANKDFYKALRKLCDEKDILLIA 218 (395)
T ss_dssp CCHHHHHHHHHHHHHHTCEEEE
T ss_pred CCHHHHHHHHHHHHHcCCEEEE
Confidence 4678899999999999998875
No 431
>1tk9_A Phosphoheptose isomerase 1; lipopolysaccharide biosynthesis, structural genomics, NYSGXRC, LPC1_camje, PSI, protein structure initiative; 2.10A {Campylobacter jejuni} SCOP: c.80.1.3
Probab=25.84 E-value=46 Score=20.57 Aligned_cols=26 Identities=15% Similarity=0.371 Sum_probs=22.1
Q ss_pred cCCHHHHHHHHHHHHhCCCcEEEEcC
Q psy4717 36 TESTEDVEKVVQVAHDHNLVIIPFGG 61 (90)
Q Consensus 36 P~s~~~v~~vv~~a~~~~i~v~~~G~ 61 (90)
.....++.++++.|++.|.+++.+.+
T Consensus 120 sG~t~~~~~~~~~ak~~g~~vi~iT~ 145 (188)
T 1tk9_A 120 SGKSPNVLEALKKAKELNMLCLGLSG 145 (188)
T ss_dssp SSCCHHHHHHHHHHHHTTCEEEEEEE
T ss_pred CCCCHHHHHHHHHHHHCCCEEEEEeC
Confidence 34568899999999999999988865
No 432
>1oy0_A Ketopantoate hydroxymethyltransferase; domain swapping, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} SCOP: c.1.12.8
Probab=25.80 E-value=81 Score=22.12 Aligned_cols=37 Identities=14% Similarity=0.246 Sum_probs=27.0
Q ss_pred cCccEEEEcCCHHHHHHHHHHHHhCCCcEEEEcCCCCCC
Q psy4717 28 IGTRYWCITESTEDVEKVVQVAHDHNLVIIPFGGGTNVT 66 (90)
Q Consensus 28 ~~p~~vv~P~s~~~v~~vv~~a~~~~i~v~~~G~G~n~~ 66 (90)
.++++++.+.-.+++.+ +++.+-.+|++-+|.|....
T Consensus 191 AGA~~ivlE~vp~~~a~--~it~~l~iP~igIGaG~~~d 227 (281)
T 1oy0_A 191 AGAFAVVMEMVPAELAT--QITGKLTIPTVGIGAGPNCD 227 (281)
T ss_dssp HTCSEEEEESCCHHHHH--HHHHHCSSCEEEESSCSCSS
T ss_pred cCCcEEEEecCCHHHHH--HHHHhCCCCEEEeCCCCCCC
Confidence 45777777665555544 56677889999999998764
No 433
>3c01_E Surface presentation of antigens protein SPAS; auto cleavage protein, flagella, ESCU, YSCU, intein, T3SS, M inner membrane, transmembrane; 2.60A {Salmonella typhimurium} SCOP: d.367.1.1
Probab=25.79 E-value=34 Score=20.32 Aligned_cols=24 Identities=17% Similarity=0.198 Sum_probs=17.6
Q ss_pred EEcCCHHHHHHHHHHHHhCCCcEE
Q psy4717 34 CITESTEDVEKVVQVAHDHNLVII 57 (90)
Q Consensus 34 v~P~s~~~v~~vv~~a~~~~i~v~ 57 (90)
+.=..-+-..++++.|+++|+|++
T Consensus 21 vAKG~~~~A~~I~e~A~e~gVPi~ 44 (98)
T 3c01_E 21 SVYETNQRALAVRAYAEKVGVPVI 44 (98)
T ss_dssp EEEEEHHHHHHHHHHHHHHTCCEE
T ss_pred EEEeCcHHHHHHHHHHHHcCCCee
Confidence 333344555788999999999986
No 434
>3gnh_A L-lysine, L-arginine carboxypeptidase CC2672; N-methyl phosphonate derivative of L- arginine, hydrolase; HET: KCX M3R; 1.70A {Caulobacter crescentus CB15} PDB: 3mtw_A*
Probab=25.78 E-value=80 Score=21.59 Aligned_cols=26 Identities=23% Similarity=0.330 Sum_probs=22.4
Q ss_pred CCHHHHHHHHHHHHhCCCcEEEEcCC
Q psy4717 37 ESTEDVEKVVQVAHDHNLVIIPFGGG 62 (90)
Q Consensus 37 ~s~~~v~~vv~~a~~~~i~v~~~G~G 62 (90)
-+.+++.++++.|++.++++..--.+
T Consensus 204 ~~~e~l~~~~~~A~~~g~~v~~H~~~ 229 (403)
T 3gnh_A 204 LTYEEMKAVVDEAHMAGIKVAAHAHG 229 (403)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEEEECS
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 57899999999999999999886543
No 435
>2e8y_A AMYX protein, pullulanase; multiple domain, beta-alpha-barrel, alpha-amylase-family, HY; 2.11A {Bacillus subtilis} PDB: 2e8z_A* 2e9b_A*
Probab=25.76 E-value=44 Score=26.03 Aligned_cols=20 Identities=20% Similarity=0.526 Sum_probs=18.7
Q ss_pred HHHHHHHHHHHHhCCCcEEE
Q psy4717 39 TEDVEKVVQVAHDHNLVIIP 58 (90)
Q Consensus 39 ~~~v~~vv~~a~~~~i~v~~ 58 (90)
.+|++++++.|+++||.|+.
T Consensus 315 ~~dfk~LV~~aH~~GI~VIl 334 (718)
T 2e8y_A 315 KTELKQMINTLHQHGLRVIL 334 (718)
T ss_dssp HHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHHCCCEEEE
Confidence 69999999999999999876
No 436
>1pea_A Amidase operon; gene regulator, receptor, binding protein; 2.10A {Pseudomonas aeruginosa} SCOP: c.93.1.1 PDB: 1qo0_A 1qnl_A
Probab=25.74 E-value=1.2e+02 Score=20.61 Aligned_cols=33 Identities=12% Similarity=0.101 Sum_probs=27.4
Q ss_pred CccEEEEcCCHHHHHHHHHHHHhCCCcEEEEcC
Q psy4717 29 GTRYWCITESTEDVEKVVQVAHDHNLVIIPFGG 61 (90)
Q Consensus 29 ~p~~vv~P~s~~~v~~vv~~a~~~~i~v~~~G~ 61 (90)
+.++|+-|.+......++..+.+.++|++..+.
T Consensus 75 ~v~~iig~~~s~~~~~~~~~~~~~~iP~v~~~~ 107 (385)
T 1pea_A 75 GVRFLVGCYMSHTRKAVMPVVERADALLCYPTP 107 (385)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHHTTCEEEECSC
T ss_pred CcEEEECCCchHHHHHHHHHHHhcCceEEECCc
Confidence 478889888877777888899999999988765
No 437
>3emz_A Xylanase, endo-1,4-beta-xylanase; (alpha/beta)8 barrel, GH10 enzyme complex, hydrolase; HET: HXH; 2.08A {Bacillus SP} SCOP: c.1.8.3 PDB: 3emq_A* 3emc_A*
Probab=25.65 E-value=48 Score=23.54 Aligned_cols=26 Identities=15% Similarity=0.247 Sum_probs=20.0
Q ss_pred HHHHHHHHHHHhCCCcEEEEcCCCCCCCCc
Q psy4717 40 EDVEKVVQVAHDHNLVIIPFGGGTNVTGAV 69 (90)
Q Consensus 40 ~~v~~vv~~a~~~~i~v~~~G~G~n~~~~~ 69 (90)
+..-+++++|.++|+++ .||.+.++.
T Consensus 61 ~~~D~~v~~a~~~gi~v----rgHtLvWh~ 86 (331)
T 3emz_A 61 EAADEIVDFAVARGIGV----RGHTLVWHN 86 (331)
T ss_dssp HHHHHHHHHHHTTTCEE----EECCSBCSS
T ss_pred hHHHHHHHHHHHCCCEE----eeeeeeccc
Confidence 56789999999999987 346665544
No 438
>1woh_A Agmatinase; alpha/beta fold, hydrolase; 1.75A {Deinococcus radiodurans} SCOP: c.42.1.1 PDB: 1wog_A 1woi_A
Probab=25.62 E-value=41 Score=23.33 Aligned_cols=30 Identities=13% Similarity=0.260 Sum_probs=21.6
Q ss_pred HHHHHHHHHHHhCCCcEEEEcCCCCCCCCc
Q psy4717 40 EDVEKVVQVAHDHNLVIIPFGGGTNVTGAV 69 (90)
Q Consensus 40 ~~v~~vv~~a~~~~i~v~~~G~G~n~~~~~ 69 (90)
+++++.++-+-+.+.-.+.+||.|+++.+.
T Consensus 98 ~~i~~~v~~~l~~g~~pi~lGGdHsit~~~ 127 (305)
T 1woh_A 98 DRITEAARQVRGRCRVPVFLGGDHSVSYPL 127 (305)
T ss_dssp HHHHHHHHHHHTTEEEEEEEESSGGGHHHH
T ss_pred HHHHHHHHHHHhCCCeEEEECCCccchHHH
Confidence 445666666667777788899999986544
No 439
>3b8x_A WBDK, pyridoxamine 5-phosphate-dependent dehydrase; aspartate aminotransferase, colitose, perosamine, O-antigen, pyridoxal phosphate,; HET: G4M; 1.70A {Escherichia coli} PDB: 2gms_A* 2gmu_A* 2r0t_A* 3gr9_A*
Probab=25.61 E-value=29 Score=23.95 Aligned_cols=23 Identities=0% Similarity=0.338 Sum_probs=19.3
Q ss_pred cCCHHHHHHHHHHHHhCCCcEEE
Q psy4717 36 TESTEDVEKVVQVAHDHNLVIIP 58 (90)
Q Consensus 36 P~s~~~v~~vv~~a~~~~i~v~~ 58 (90)
+.+.+++.++.++|+++++.++.
T Consensus 138 ~g~~~~~~~i~~l~~~~~~~li~ 160 (390)
T 3b8x_A 138 LGNPNNFDEINKIIGGRDIILLE 160 (390)
T ss_dssp GGCCCCHHHHHHHHTTSCCEEEE
T ss_pred ccChhhHHHHHHHHHHcCCEEEE
Confidence 56778999999999999987665
No 440
>3c3m_A Response regulator receiver protein; structural genomics, unknown function, PSI-2, protein struct initiative; HET: MSE; 1.70A {Methanoculleus marisnigri JR1}
Probab=25.47 E-value=49 Score=18.90 Aligned_cols=27 Identities=7% Similarity=0.087 Sum_probs=19.7
Q ss_pred cEEEEcCCHHHHHHHHHHHHhCCCcEE
Q psy4717 31 RYWCITESTEDVEKVVQVAHDHNLVII 57 (90)
Q Consensus 31 ~~vv~P~s~~~v~~vv~~a~~~~i~v~ 57 (90)
+++..|-+.+++.+.++.+.+......
T Consensus 102 ~~l~KP~~~~~L~~~i~~~~~~~~~~~ 128 (138)
T 3c3m_A 102 DYILKPTTHHQLYEAIEHVLARRHSIA 128 (138)
T ss_dssp EEEECCCHHHHHHHHHHHHHSCC----
T ss_pred heEeCCCCHHHHHHHHHHHHHHhhccC
Confidence 788999999999999988776544333
No 441
>3mfq_A TROA, high-affinity zinc uptake system protein ZNUA; metal binding protein; 2.60A {Streptococcus suis} SCOP: c.92.2.0
Probab=25.41 E-value=62 Score=22.15 Aligned_cols=27 Identities=30% Similarity=0.336 Sum_probs=21.4
Q ss_pred CHHHHHHHHHHHHhCCCcEEEEcCCCC
Q psy4717 38 STEDVEKVVQVAHDHNLVIIPFGGGTN 64 (90)
Q Consensus 38 s~~~v~~vv~~a~~~~i~v~~~G~G~n 64 (90)
|..+++++++.+++++++++..-...+
T Consensus 197 s~~~l~~l~~~ik~~~v~~if~e~~~~ 223 (282)
T 3mfq_A 197 ANSDMIETVNLIIDHNIKAIFTESTTN 223 (282)
T ss_dssp CHHHHHHHHHHHHHHTCCEEECBTTSC
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeCCCC
Confidence 788999999999999988887655443
No 442
>2gm5_A Transposon gamma-delta resolvase; site specific recombination, recombin; 2.10A {Escherichia coli} PDB: 2rsl_A 1gdr_A 1ght_A 1hx7_A
Probab=25.14 E-value=78 Score=19.11 Aligned_cols=27 Identities=15% Similarity=0.226 Sum_probs=23.2
Q ss_pred CCHHHHHHHHHHHHhCCCcEEEEcCCC
Q psy4717 37 ESTEDVEKVVQVAHDHNLVIIPFGGGT 63 (90)
Q Consensus 37 ~s~~~v~~vv~~a~~~~i~v~~~G~G~ 63 (90)
++..|+..+++.+.+.|+.++....+-
T Consensus 70 R~~~d~~~~~~~l~~~gv~l~~~~~~~ 96 (139)
T 2gm5_A 70 RDTADMIQLIKEFDAQGVSIRFIDDGI 96 (139)
T ss_dssp SSHHHHHHHHHHHHHTTCEEEETTTTE
T ss_pred CCHHHHHHHHHHHHhCCCEEEEecCCc
Confidence 478999999999999999999876653
No 443
>2vg0_A Short-chain Z-isoprenyl diphosphate synthetase; peptidoglycan synthesis, cell WALL biogenesis/degradation, secreted, cell shape; HET: GPP; 1.7A {Mycobacterium tuberculosis} PDB: 2vfw_A* 2vg1_A*
Probab=25.13 E-value=54 Score=22.15 Aligned_cols=23 Identities=4% Similarity=0.274 Sum_probs=18.5
Q ss_pred HHHHHHHHHHHHhCCCc---EEEEcC
Q psy4717 39 TEDVEKVVQVAHDHNLV---IIPFGG 61 (90)
Q Consensus 39 ~~~v~~vv~~a~~~~i~---v~~~G~ 61 (90)
.+.+.++++||.+.||+ ++.++.
T Consensus 33 ~~~l~~i~~~c~~~GI~~lTlYaFSt 58 (227)
T 2vg0_A 33 AAKIAEMLRWCHEAGIELATVYLLST 58 (227)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEEEEET
T ss_pred HHHHHHHHHHHHHcCCCEEEEEeecc
Confidence 68899999999999986 445544
No 444
>4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A
Probab=25.12 E-value=48 Score=19.83 Aligned_cols=27 Identities=7% Similarity=0.308 Sum_probs=22.7
Q ss_pred HHHHHHHHHHHHhCCCcEEEEcCCCCC
Q psy4717 39 TEDVEKVVQVAHDHNLVIIPFGGGTNV 65 (90)
Q Consensus 39 ~~~v~~vv~~a~~~~i~v~~~G~G~n~ 65 (90)
.+++.++++.+++.++++.+.+++...
T Consensus 81 ~~~~~~~l~~l~~~g~~~~i~t~~~~~ 107 (201)
T 4ap9_A 81 SPEARELVETLREKGFKVVLISGSFEE 107 (201)
T ss_dssp CHHHHHHHHHHHHTTCEEEEEEEEETT
T ss_pred ChhHHHHHHHHHHCCCeEEEEeCCcHH
Confidence 467889999999999999999877653
No 445
>3o0k_A Aldo/keto reductase; ssgcid, ALS collaborative crystallography; 1.80A {Brucella melitensis biovar}
Probab=25.09 E-value=55 Score=22.38 Aligned_cols=18 Identities=6% Similarity=0.235 Sum_probs=15.9
Q ss_pred HHHHHHHHhCCCcEEEEc
Q psy4717 43 EKVVQVAHDHNLVIIPFG 60 (90)
Q Consensus 43 ~~vv~~a~~~~i~v~~~G 60 (90)
.+++.+|+++|+.+++++
T Consensus 194 ~~l~~~~~~~gi~v~a~s 211 (283)
T 3o0k_A 194 DELRLFHGKHDIATEAWS 211 (283)
T ss_dssp HHHHHHHHHTTCEEEEES
T ss_pred HHHHHHHHHCCcEEEEec
Confidence 369999999999999875
No 446
>2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A*
Probab=25.07 E-value=41 Score=21.32 Aligned_cols=24 Identities=4% Similarity=0.147 Sum_probs=21.3
Q ss_pred HHHHHHHHHHHhCCCcEEEEcCCC
Q psy4717 40 EDVEKVVQVAHDHNLVIIPFGGGT 63 (90)
Q Consensus 40 ~~v~~vv~~a~~~~i~v~~~G~G~ 63 (90)
..+.++++.+++.|+++.+.++++
T Consensus 53 pg~~e~L~~L~~~G~~~~ivTn~~ 76 (211)
T 2gmw_A 53 DGVIDAMRELKKMGFALVVVTNQS 76 (211)
T ss_dssp TTHHHHHHHHHHTTCEEEEEEECT
T ss_pred cCHHHHHHHHHHCCCeEEEEECcC
Confidence 467888999999999999999887
No 447
>3tc3_A UV damage endonuclease; TIM-barrel, hydrolase; 1.50A {Sulfolobus acidocaldarius}
Probab=25.01 E-value=52 Score=23.49 Aligned_cols=25 Identities=4% Similarity=0.193 Sum_probs=21.4
Q ss_pred CCHHHHHHHHHHHHhCCCcEEEEcC
Q psy4717 37 ESTEDVEKVVQVAHDHNLVIIPFGG 61 (90)
Q Consensus 37 ~s~~~v~~vv~~a~~~~i~v~~~G~ 61 (90)
.+.+++.++++|+.+++|.++=+|+
T Consensus 57 ~Nl~~l~~il~~n~~~~I~~yRiSS 81 (310)
T 3tc3_A 57 SNLLCLKNILEWNLKHEILFFRISS 81 (310)
T ss_dssp HHHHHHHHHHHHHHHTTCCEEECCT
T ss_pred HHHHHHHHHHHHHHHcCCEEEEeCc
Confidence 4568899999999999999988764
No 448
>1zgd_A Chalcone reductase; polyketide, deoxychalcone, isoflavonoid, biosynthesis, plant protein; HET: NAP; 1.70A {Medicago sativa}
Probab=24.96 E-value=55 Score=22.53 Aligned_cols=19 Identities=21% Similarity=0.497 Sum_probs=16.3
Q ss_pred HHHHHHHHhCCCcEEEEcC
Q psy4717 43 EKVVQVAHDHNLVIIPFGG 61 (90)
Q Consensus 43 ~~vv~~a~~~~i~v~~~G~ 61 (90)
.+++++|+++|+.+++++-
T Consensus 198 ~~l~~~~~~~gi~v~a~sp 216 (312)
T 1zgd_A 198 KKLREFCNAHGIVLTAFSP 216 (312)
T ss_dssp HHHHHHHHHTTCEEEEEST
T ss_pred HHHHHHHHHcCCEEEEecC
Confidence 4799999999999988754
No 449
>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*
Probab=24.90 E-value=1.5e+02 Score=20.15 Aligned_cols=34 Identities=9% Similarity=-0.003 Sum_probs=28.6
Q ss_pred CccEEEEcCCHHHHHHHHHHHHhCCCcEEEEcCC
Q psy4717 29 GTRYWCITESTEDVEKVVQVAHDHNLVIIPFGGG 62 (90)
Q Consensus 29 ~p~~vv~P~s~~~v~~vv~~a~~~~i~v~~~G~G 62 (90)
.+++|+--.+.+...+.++.|.++|++++.-..|
T Consensus 72 ~~DvVIDft~p~~~~~~~~~a~~~G~~vVigTtG 105 (273)
T 1dih_A 72 DFDVFIDFTRPEGTLNHLAFCRQHGKGMVIGTTG 105 (273)
T ss_dssp SCSEEEECSCHHHHHHHHHHHHHTTCEEEECCCC
T ss_pred CCCEEEEcCChHHHHHHHHHHHhCCCCEEEECCC
Confidence 5899997888999999999999999998774443
No 450
>1mi3_A Xylose reductase, XR; aldo-keto reductase, beta-alpha barrel, dimer, oxidoreductase; HET: NAD; 1.80A {Candida tenuis} SCOP: c.1.7.1 PDB: 1jez_A* 1k8c_A* 1ye6_A* 1ye4_A* 1sm9_A* 1r38_A* 1z9a_A*
Probab=24.78 E-value=55 Score=22.59 Aligned_cols=18 Identities=17% Similarity=0.447 Sum_probs=15.9
Q ss_pred HHHHHHHHhCCCcEEEEc
Q psy4717 43 EKVVQVAHDHNLVIIPFG 60 (90)
Q Consensus 43 ~~vv~~a~~~~i~v~~~G 60 (90)
.+++.+|+++|+.+++++
T Consensus 201 ~~l~~~~~~~gi~v~a~s 218 (322)
T 1mi3_A 201 PKLIEFAQKAGVTITAYS 218 (322)
T ss_dssp HHHHHHHHHTTCEEEEEC
T ss_pred HHHHHHHHHcCCEEEEEC
Confidence 479999999999998875
No 451
>3meb_A Aspartate aminotransferase; pyridoxal PHOS transferase, structural genomics, seattle structural genomi for infectious disease, ssgcid; HET: PLP; 1.90A {Giardia lamblia}
Probab=24.75 E-value=50 Score=23.49 Aligned_cols=21 Identities=0% Similarity=0.164 Sum_probs=18.3
Q ss_pred CHHHHHHHHHHHHhCCCcEEE
Q psy4717 38 STEDVEKVVQVAHDHNLVIIP 58 (90)
Q Consensus 38 s~~~v~~vv~~a~~~~i~v~~ 58 (90)
+.+++.+++++|+++++.++.
T Consensus 220 ~~~~l~~i~~l~~~~~~~li~ 240 (448)
T 3meb_A 220 TEAQWKELLPIMKEKKHIAFF 240 (448)
T ss_dssp CHHHHHHHHHHHHHHTCEEEE
T ss_pred CHHHHHHHHHHHHHCCCEEEE
Confidence 568999999999999987766
No 452
>3buv_A 3-OXO-5-beta-steroid 4-dehydrogenase; 5-beta-reductase, catalytic tetrad, hepes, NADP, bIle catabolism, disease mutation, lipid metabolism; HET: NAP EPE; 1.35A {Homo sapiens} PDB: 3bur_A* 3bv7_A* 3caq_A* 3cas_A* 3cav_A* 3g1r_A* 3cot_A* 3dop_A* 3cmf_A* 3uzx_A* 3uzw_A* 3uzy_A* 3uzz_A*
Probab=24.58 E-value=56 Score=22.64 Aligned_cols=19 Identities=21% Similarity=0.571 Sum_probs=16.5
Q ss_pred HHHHHHHHhCCCcEEEEcC
Q psy4717 43 EKVVQVAHDHNLVIIPFGG 61 (90)
Q Consensus 43 ~~vv~~a~~~~i~v~~~G~ 61 (90)
.+++++|+++|+.+++++-
T Consensus 203 ~~l~~~~~~~gI~v~a~sp 221 (326)
T 3buv_A 203 PKLLKFCQQHDIVITAYSP 221 (326)
T ss_dssp HHHHHHHHHTTCEEEEEST
T ss_pred HHHHHHHHHcCCEEEEecc
Confidence 4799999999999988764
No 453
>4exb_A Putative uncharacterized protein; aldo-keto reductase, NADP+ binding, oxidoreducta; 2.75A {Pseudomonas aeruginosa} PDB: 4exa_A
Probab=24.56 E-value=56 Score=22.38 Aligned_cols=18 Identities=22% Similarity=0.170 Sum_probs=16.2
Q ss_pred HHHHHHHHhCCCcEEEEc
Q psy4717 43 EKVVQVAHDHNLVIIPFG 60 (90)
Q Consensus 43 ~~vv~~a~~~~i~v~~~G 60 (90)
.+++++|+++|+.+++++
T Consensus 219 ~~l~~~~~~~gi~v~a~s 236 (292)
T 4exb_A 219 RPVIEYAAAHAKGILVKK 236 (292)
T ss_dssp HHHHHHHHHTTCEEEEEC
T ss_pred HHHHHHHHHCCcEEEEec
Confidence 689999999999998875
No 454
>3cx3_A Lipoprotein; zinc-binding, transport, lipid binding protein, metal binding protein; 2.40A {Streptococcus pneumoniae}
Probab=24.50 E-value=57 Score=22.25 Aligned_cols=29 Identities=7% Similarity=0.090 Sum_probs=24.2
Q ss_pred cCCHHHHHHHHHHHHhCCCcEEEEcCCCC
Q psy4717 36 TESTEDVEKVVQVAHDHNLVIIPFGGGTN 64 (90)
Q Consensus 36 P~s~~~v~~vv~~a~~~~i~v~~~G~G~n 64 (90)
.-|..+++++++.+++++++++..-...+
T Consensus 209 eps~~~l~~l~~~ik~~~v~~if~e~~~~ 237 (284)
T 3cx3_A 209 EPSPRQLTEIQEFVKTYKVKTIFTESNAS 237 (284)
T ss_dssp CCCSHHHHHHHHHHHHTTCCCEEECSSSC
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEeCCCC
Confidence 35779999999999999999888765554
No 455
>2a4x_A Mitomycin-binding protein; ALFA/beta protein, mitomycin C-binding protein, bleomycin A2, antimicrobial protein; HET: BLM; 1.40A {Streptomyces caespitosus} SCOP: d.32.1.2 PDB: 2a4w_A* 1kmz_A 1kll_A*
Probab=24.42 E-value=1.1e+02 Score=17.50 Aligned_cols=26 Identities=15% Similarity=-0.127 Sum_probs=21.8
Q ss_pred EEEEcCCHHHHHHHHHHHHhCCCcEE
Q psy4717 32 YWCITESTEDVEKVVQVAHDHNLVII 57 (90)
Q Consensus 32 ~vv~P~s~~~v~~vv~~a~~~~i~v~ 57 (90)
..+...+.+++.++.+.+.+.|+++.
T Consensus 75 l~f~v~~~~dv~~~~~~l~~~G~~~~ 100 (138)
T 2a4x_A 75 IAFEFPDTASVDKKYAELVDAGYEGH 100 (138)
T ss_dssp EEEECSSHHHHHHHHHHHHHTTCCEE
T ss_pred EEEEeCCHHHHHHHHHHHHHCCCcee
Confidence 45666788899999999999998765
No 456
>2l82_A Designed protein OR32; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, de novo protein; NMR {Artificial gene}
Probab=24.38 E-value=1.3e+02 Score=18.60 Aligned_cols=28 Identities=7% Similarity=0.272 Sum_probs=24.8
Q ss_pred EEEEcCCHHHHHHHHHHHHhCCCcEEEE
Q psy4717 32 YWCITESTEDVEKVVQVAHDHNLVIIPF 59 (90)
Q Consensus 32 ~vv~P~s~~~v~~vv~~a~~~~i~v~~~ 59 (90)
++++.++.+-+.++++...+.|+.+..+
T Consensus 5 fvvfssdpeilkeivreikrqgvrvvll 32 (162)
T 2l82_A 5 FVVFSSDPEILKEIVREIKRQGVRVVLL 32 (162)
T ss_dssp EEEEESCHHHHHHHHHHHHHTTCEEEEE
T ss_pred EEEecCCHHHHHHHHHHHHhCCeEEEEE
Confidence 5788999999999999999999987764
No 457
>3ro8_A Endo-1,4-beta-xylanase; glycosyl hydrolase family 10, GH10, (beta/alpha)8 fold, XYLA hydrolase; 1.34A {Paenibacillus SP} PDB: 3rdk_A 4e4p_A
Probab=24.32 E-value=33 Score=24.54 Aligned_cols=27 Identities=4% Similarity=0.069 Sum_probs=21.6
Q ss_pred HHHHHHHHHHHhCCCcEEEEcCCCCCCCCcc
Q psy4717 40 EDVEKVVQVAHDHNLVIIPFGGGTNVTGAVA 70 (90)
Q Consensus 40 ~~v~~vv~~a~~~~i~v~~~G~G~n~~~~~~ 70 (90)
+..-+++++|.++|+++. ||.+.+++.
T Consensus 62 ~~aD~~v~~a~~ngi~vr----GHtLvWh~q 88 (341)
T 3ro8_A 62 TAADAMIDKVLAEGMKMH----GHVLVWHQQ 88 (341)
T ss_dssp HHHHHHHHHHHHTTCEEE----EEEEECSSS
T ss_pred HHHHHHHHHHHhCCCEEE----eccccCccc
Confidence 577899999999999884 677766553
No 458
>3krb_A Aldose reductase; ssgcid, SBRI, emerald biostructures, university of washingto niaid, oxidoreductase, S genomics; HET: NAP; 1.75A {Giardia lamblia}
Probab=24.26 E-value=57 Score=22.76 Aligned_cols=19 Identities=11% Similarity=0.324 Sum_probs=16.7
Q ss_pred HHHHHHHHhCCCcEEEEcC
Q psy4717 43 EKVVQVAHDHNLVIIPFGG 61 (90)
Q Consensus 43 ~~vv~~a~~~~i~v~~~G~ 61 (90)
.+++.+|+++|+.+++++-
T Consensus 208 ~~l~~~c~~~gI~v~aysp 226 (334)
T 3krb_A 208 DATVKFCLDNGIGVTAYSP 226 (334)
T ss_dssp HHHHHHHHHTTCEEEEEST
T ss_pred HHHHHHHHHcCCEEEEEec
Confidence 5799999999999998863
No 459
>1qwk_A Aldose reductase, aldo-keto reductase family 1 member C1, XH961; structural genomics, PSI, protein structure initiative; 1.60A {Caenorhabditis elegans} SCOP: c.1.7.1
Probab=24.21 E-value=57 Score=22.48 Aligned_cols=19 Identities=16% Similarity=0.420 Sum_probs=16.4
Q ss_pred HHHHHHHHhCCCcEEEEcC
Q psy4717 43 EKVVQVAHDHNLVIIPFGG 61 (90)
Q Consensus 43 ~~vv~~a~~~~i~v~~~G~ 61 (90)
.+++.+|+++|+.+++++-
T Consensus 185 ~~l~~~~~~~gI~v~a~sp 203 (317)
T 1qwk_A 185 HDHVDFCKKHNISVTSYAT 203 (317)
T ss_dssp HHHHHHHHHTTCEEEEEST
T ss_pred HHHHHHHHHcCCEEEEecC
Confidence 4799999999999988754
No 460
>3ncq_A Nitrogen regulatory protein P-II (GLNB-2); PII signaling, nucleotide binding, GLNK, signaling Pro; HET: ATP; 1.24A {Archaeoglobus fulgidus} SCOP: d.58.5.0 PDB: 3ncp_A* 3ncr_A*
Probab=24.14 E-value=52 Score=19.89 Aligned_cols=33 Identities=12% Similarity=0.086 Sum_probs=23.6
Q ss_pred cEEEEcCCHHHHHHHHHHHHhCCCcEE-EEcCCC
Q psy4717 31 RYWCITESTEDVEKVVQVAHDHNLVII-PFGGGT 63 (90)
Q Consensus 31 ~~vv~P~s~~~v~~vv~~a~~~~i~v~-~~G~G~ 63 (90)
.++++|...++|.++|.-+--.++.++ +.|-|.
T Consensus 5 ~AIIrp~kl~~Vk~AL~~~G~~g~Tv~~V~G~G~ 38 (119)
T 3ncq_A 5 EAIVRAEKFPEVKAALEERGFYGMTVTDVKGRGQ 38 (119)
T ss_dssp EEEECTTTHHHHHHHHHHTTCCCEEEEEEEEECS
T ss_pred EEEECHHHHHHHHHHHHHCCCCeEEEEeeEeEcC
Confidence 578999999999999987655555543 334454
No 461
>1hw6_A 2,5-diketo-D-gluconic acid reductase; aldo-keto reductase, TIM barrel, oxidoreductase; 1.90A {Corynebacterium SP} SCOP: c.1.7.1 PDB: 1a80_A* 1m9h_A*
Probab=24.11 E-value=59 Score=22.04 Aligned_cols=18 Identities=22% Similarity=0.455 Sum_probs=15.8
Q ss_pred HHHHHHHHhCCCcEEEEc
Q psy4717 43 EKVVQVAHDHNLVIIPFG 60 (90)
Q Consensus 43 ~~vv~~a~~~~i~v~~~G 60 (90)
.+++.+|+++|+.+++++
T Consensus 171 ~~l~~~~~~~gi~v~a~s 188 (278)
T 1hw6_A 171 REITDWAAAHDVKIESWG 188 (278)
T ss_dssp HHHHHHHHHTTCEEEEES
T ss_pred HHHHHHHHHcCCEEEEec
Confidence 479999999999998875
No 462
>1us0_A Aldose reductase; oxidoreductase, NADP, IDD594; HET: NDP LDT CIT; 0.66A {Homo sapiens} SCOP: c.1.7.1 PDB: 1pwl_A* 1t41_A* 1pwm_A* 1x96_A* 1x97_A* 1x98_A* 1z89_A* 1z8a_A* 2dux_A* 2duz_A* 2dv0_A* 2fz8_A* 2fz9_A* 2fzb_A* 2fzd_A* 2hv5_A* 2hvn_A* 2hvo_A* 2i16_A* 2i17_A* ...
Probab=24.10 E-value=58 Score=22.41 Aligned_cols=19 Identities=21% Similarity=0.517 Sum_probs=16.3
Q ss_pred HHHHHHHHhCCCcEEEEcC
Q psy4717 43 EKVVQVAHDHNLVIIPFGG 61 (90)
Q Consensus 43 ~~vv~~a~~~~i~v~~~G~ 61 (90)
.+++++|+++|+.+++++-
T Consensus 194 ~~l~~~~~~~gI~v~a~sp 212 (316)
T 1us0_A 194 EKLIQYCQSKGIVVTAYSP 212 (316)
T ss_dssp HHHHHHHHHTTCEEEEEST
T ss_pred HHHHHHHHHcCCEEEEecc
Confidence 4799999999999988764
No 463
>3pv9_D Putative uncharacterized protein PH1245; crispr, crispr-associated CAS1, metallonuclease, DNAse, PROK system, immune system, nuclease; 2.85A {Pyrococcus horikoshii}
Probab=24.01 E-value=50 Score=23.27 Aligned_cols=31 Identities=10% Similarity=0.103 Sum_probs=24.1
Q ss_pred HHHHHHHHHHHHhCCCcEEEEcCCCCCCCCc
Q psy4717 39 TEDVEKVVQVAHDHNLVIIPFGGGTNVTGAV 69 (90)
Q Consensus 39 ~~~v~~vv~~a~~~~i~v~~~G~G~n~~~~~ 69 (90)
+.==.++++.|.++|+++..++......+..
T Consensus 46 v~is~~~l~~l~~~gi~v~f~~~~G~~~g~~ 76 (322)
T 3pv9_D 46 VNITSQALHYIAQKGILIHFFNHYGYYDGTF 76 (322)
T ss_dssp EEECHHHHHHHHHTTCEEEEECSSSCEEEEE
T ss_pred CCcCHHHHHHHHHCCCeEEEECCCCeEEEEE
Confidence 3333689999999999999999876665444
No 464
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=24.00 E-value=86 Score=22.02 Aligned_cols=23 Identities=4% Similarity=0.289 Sum_probs=18.1
Q ss_pred HHHHHHHHHHhCCCcEEEEcCCC
Q psy4717 41 DVEKVVQVAHDHNLVIIPFGGGT 63 (90)
Q Consensus 41 ~v~~vv~~a~~~~i~v~~~G~G~ 63 (90)
++.+.++-+++.|.+++.+|.|+
T Consensus 307 ~l~~~l~~~k~~gk~v~~yGa~~ 329 (416)
T 4e2x_A 307 ELTALLHRLRAEGRSVVGYGATA 329 (416)
T ss_dssp HHHHHHHHHHHTTCCEEEECCCS
T ss_pred HHHHHHHHHHHcCCeEEEEcccc
Confidence 45555666678899999999998
No 465
>1b93_A Protein (methylglyoxal synthase); glycolytic bypass, lyase; 1.90A {Escherichia coli} SCOP: c.24.1.2 PDB: 1egh_A 1ik4_A* 1s8a_A 1s89_A
Probab=24.00 E-value=84 Score=19.99 Aligned_cols=19 Identities=21% Similarity=0.366 Sum_probs=18.0
Q ss_pred HHHHHHHHHHHHhCCCcEE
Q psy4717 39 TEDVEKVVQVAHDHNLVII 57 (90)
Q Consensus 39 ~~~v~~vv~~a~~~~i~v~ 57 (90)
..|...+.+.|..+++|++
T Consensus 99 ~~D~~~IrR~A~~~~IP~~ 117 (152)
T 1b93_A 99 DPDVKALLRLATVWNIPVA 117 (152)
T ss_dssp HHHHHHHHHHHHHTTCCEE
T ss_pred cccHHHHHHHHHHcCCCEE
Confidence 7899999999999999987
No 466
>3dmy_A Protein FDRA; predicted actyl-COA synthetase, nysgrc, PSI-II, STRU genomics, protein structure initiative; 2.07A {Escherichia coli}
Probab=23.91 E-value=1.3e+02 Score=22.63 Aligned_cols=33 Identities=21% Similarity=0.255 Sum_probs=20.7
Q ss_pred ccEEEEcCCHHHHHHHHHHHHhCCCcEEEEcCC
Q psy4717 30 TRYWCITESTEDVEKVVQVAHDHNLVIIPFGGG 62 (90)
Q Consensus 30 p~~vv~P~s~~~v~~vv~~a~~~~i~v~~~G~G 62 (90)
|+..+.--..+.+.++++-|.+.|+++++++.|
T Consensus 37 ~DlavI~vPa~~v~~~v~e~~~~Gv~~viis~G 69 (480)
T 3dmy_A 37 ANLALISVAGEYAAELANQALDRNLNVMMFSDN 69 (480)
T ss_dssp CCEEEECSCHHHHHHHHHHHHHTTCEEEECCCC
T ss_pred CCEEEEecCHHHHHHHHHHHHhcCCCEEEECCC
Confidence 556666666666666666666666665555544
No 467
>1tv8_A MOAA, molybdenum cofactor biosynthesis protein A; TIM barrel, ligand binding protein; HET: SAM; 2.20A {Staphylococcus aureus} SCOP: c.1.28.3 PDB: 1tv7_A* 2fb3_A* 2fb2_A*
Probab=23.76 E-value=90 Score=21.37 Aligned_cols=25 Identities=16% Similarity=0.395 Sum_probs=13.1
Q ss_pred CHHHHHHHHHHHHhCCCcEEEEcCC
Q psy4717 38 STEDVEKVVQVAHDHNLVIIPFGGG 62 (90)
Q Consensus 38 s~~~v~~vv~~a~~~~i~v~~~G~G 62 (90)
+.+++.++++.+.+.++.-+.+.||
T Consensus 51 s~e~i~~~i~~~~~~g~~~i~~tGG 75 (340)
T 1tv8_A 51 TFDEMARIAKVYAELGVKKIRITGG 75 (340)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CHHHHHHHHHHHHHCCCCEEEEeCC
Confidence 4455555555555555544444444
No 468
>3snr_A Extracellular ligand-binding receptor; structural genomics, APC102214, PSI-biology, midwest center structural genomics, MCSG; HET: MSE TYR PHE; 1.49A {Rhodopseudomonas palustris} PDB: 3uk0_A* 3t23_A* 3ukj_A* 4eyo_A* 4eyq_A* 3tx6_A* 4f8j_A* 4fb4_A*
Probab=23.73 E-value=1e+02 Score=20.36 Aligned_cols=32 Identities=3% Similarity=-0.072 Sum_probs=26.1
Q ss_pred CccEEEEcCCHHHHHHHHHHHHhCCCcEEEEc
Q psy4717 29 GTRYWCITESTEDVEKVVQVAHDHNLVIIPFG 60 (90)
Q Consensus 29 ~p~~vv~P~s~~~v~~vv~~a~~~~i~v~~~G 60 (90)
.|++|+...+..+...+++.+++.|+.+-.++
T Consensus 190 ~~dav~~~~~~~~a~~~~~~~~~~g~~~p~i~ 221 (362)
T 3snr_A 190 NPDAILVGASGTAAALPQTTLRERGYNGLIYQ 221 (362)
T ss_dssp CCSEEEEECCHHHHHHHHHHHHHTTCCSEEEE
T ss_pred CCCEEEEecCcchHHHHHHHHHHcCCCccEEe
Confidence 48999999989999999999999987543343
No 469
>2qs8_A XAA-Pro dipeptidase; amidohydrolase, TIM barrel, protein structure initiative, PSI-2, NYSGXRC, structural genomics; 2.33A {Alteromonas macleodii} SCOP: b.92.1.9 c.1.9.18
Probab=23.73 E-value=75 Score=22.06 Aligned_cols=26 Identities=27% Similarity=0.372 Sum_probs=22.3
Q ss_pred CCHHHHHHHHHHHHhCCCcEEEEcCC
Q psy4717 37 ESTEDVEKVVQVAHDHNLVIIPFGGG 62 (90)
Q Consensus 37 ~s~~~v~~vv~~a~~~~i~v~~~G~G 62 (90)
-+.+++.++++.|+++|+++..--.|
T Consensus 213 ~~~~~l~~~~~~A~~~g~~v~~H~~~ 238 (418)
T 2qs8_A 213 FTQEEVDAVVSAAKDYGMWVAVHAHG 238 (418)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEEEECS
T ss_pred CCHHHHHHHHHHHHHcCCEEEEEECC
Confidence 47899999999999999999886543
No 470
>1vbj_A Prostaglandin F synthase; TIM barrel, oxidoreductase; HET: NAP CIT; 2.10A {Trypanosoma brucei}
Probab=23.71 E-value=60 Score=22.10 Aligned_cols=18 Identities=6% Similarity=0.351 Sum_probs=15.7
Q ss_pred HHHHHHHHhCCCcEEEEc
Q psy4717 43 EKVVQVAHDHNLVIIPFG 60 (90)
Q Consensus 43 ~~vv~~a~~~~i~v~~~G 60 (90)
.+++.+|+++|+.+++++
T Consensus 176 ~~l~~~~~~~gi~v~a~s 193 (281)
T 1vbj_A 176 KALCEYCKSKNIAVTAWS 193 (281)
T ss_dssp HHHHHHHHHTTCEEEEES
T ss_pred HHHHHHHHHcCCEEEEec
Confidence 479999999999998875
No 471
>3fok_A Uncharacterized protein CGL0159; CGL0159 ,brevibacterium flavum., structural genomics, PSI-2, protein structure initiative; 2.50A {Corynebacterium glutamicum}
Probab=23.67 E-value=72 Score=22.79 Aligned_cols=21 Identities=24% Similarity=0.224 Sum_probs=17.7
Q ss_pred CHHHHHHHHHHHHhCCCcEEE
Q psy4717 38 STEDVEKVVQVAHDHNLVIIP 58 (90)
Q Consensus 38 s~~~v~~vv~~a~~~~i~v~~ 58 (90)
..+++.++++.|+++|+|++.
T Consensus 161 ~l~~la~vv~ea~~~GlP~~~ 181 (307)
T 3fok_A 161 TLEATAHAVNEAAAAQLPIML 181 (307)
T ss_dssp HHHHHHHHHHHHHHTTCCEEE
T ss_pred HHHHHHHHHHHHHHcCCcEEE
Confidence 357889999999999999766
No 472
>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0
Probab=23.66 E-value=42 Score=22.72 Aligned_cols=20 Identities=20% Similarity=0.436 Sum_probs=17.5
Q ss_pred HHHHHHHHHHHHhC--CCcEEE
Q psy4717 39 TEDVEKVVQVAHDH--NLVIIP 58 (90)
Q Consensus 39 ~~~v~~vv~~a~~~--~i~v~~ 58 (90)
.+++.+++++|+++ ++.++.
T Consensus 176 ~~~l~~i~~~~~~~~~~~~li~ 197 (367)
T 3euc_A 176 AADMEAIVRAAQGSVCRSLVVV 197 (367)
T ss_dssp HHHHHHHHHHTBTTSCBCEEEE
T ss_pred HHHHHHHHHhhhhcCCCcEEEE
Confidence 48999999999999 887775
No 473
>1gjw_A Maltodextrin glycosyltransferase; alpha-amylase, maltosyltransferase; HET: MAL GLC; 2.1A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1gju_A*
Probab=23.64 E-value=54 Score=24.98 Aligned_cols=20 Identities=20% Similarity=0.323 Sum_probs=18.6
Q ss_pred HHHHHHHHHHHHhCCCcEEE
Q psy4717 39 TEDVEKVVQVAHDHNLVIIP 58 (90)
Q Consensus 39 ~~~v~~vv~~a~~~~i~v~~ 58 (90)
.+|++++|+.|+++||.|+.
T Consensus 181 ~~~~~~lv~~~H~~Gi~Vil 200 (637)
T 1gjw_A 181 DEEFKAFVEACHILGIRVIL 200 (637)
T ss_dssp HHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHHCCCEEEE
Confidence 69999999999999999875
No 474
>1f75_A Undecaprenyl pyrophosphate synthetase; parallel beta sheet, NEW fold for isoprenoid synthase, peptidoglycan synthesis, transferase; 2.20A {Micrococcus luteus} SCOP: c.101.1.1
Probab=23.57 E-value=60 Score=22.32 Aligned_cols=18 Identities=22% Similarity=0.305 Sum_probs=16.1
Q ss_pred HHHHHHHHHHHHhCCCcE
Q psy4717 39 TEDVEKVVQVAHDHNLVI 56 (90)
Q Consensus 39 ~~~v~~vv~~a~~~~i~v 56 (90)
.+.+.++++||.+.||++
T Consensus 50 ~~~l~~iv~~c~~~GI~~ 67 (249)
T 1f75_A 50 MQTVRKITRYASDLGVKY 67 (249)
T ss_dssp HHHHHHHHHHHHHHTCCE
T ss_pred HHHHHHHHHHHHHcCCCE
Confidence 588999999999999873
No 475
>2x24_A Acetyl-COA carboxylase; fatty acid biosynthesis, ligase, lipid synthesis; HET: X24; 2.40A {Bos taurus} PDB: 3ff6_A* 3tdc_A*
Probab=23.38 E-value=44 Score=26.97 Aligned_cols=29 Identities=10% Similarity=0.170 Sum_probs=26.2
Q ss_pred EEEEcCCHHHHHHHHHHHHhCCCcEEEEc
Q psy4717 32 YWCITESTEDVEKVVQVAHDHNLVIIPFG 60 (90)
Q Consensus 32 ~vv~P~s~~~v~~vv~~a~~~~i~v~~~G 60 (90)
.++.|.+..-.++.+++|++.++|++.+=
T Consensus 462 G~l~~~~a~KaarfI~~cd~f~iPlv~Lv 490 (793)
T 2x24_A 462 QVWFPDSAYKTAQAIKDFNREKLPLMIFA 490 (793)
T ss_dssp TEECHHHHHHHHHHHHHHHTTTCCEEEEC
T ss_pred CcccHHHHHHHHHHHHHhccCCCCEEEEe
Confidence 47889999999999999999999999883
No 476
>3k7y_A Aspartate aminotransferase; aminotrans pyridoxal phosphate; HET: PLP; 2.80A {Plasmodium falciparum} SCOP: c.67.1.0
Probab=23.36 E-value=51 Score=23.54 Aligned_cols=21 Identities=14% Similarity=0.306 Sum_probs=18.3
Q ss_pred CHHHHHHHHHHHHhCCCcEEE
Q psy4717 38 STEDVEKVVQVAHDHNLVIIP 58 (90)
Q Consensus 38 s~~~v~~vv~~a~~~~i~v~~ 58 (90)
+.+++.+++++|+++++.++.
T Consensus 192 s~~~~~~l~~~~~~~~~~vi~ 212 (405)
T 3k7y_A 192 EEKYFDEIIEIVLHKKHVIIF 212 (405)
T ss_dssp CHHHHHHHHHHHHHHCCEEEE
T ss_pred CHHHHHHHHHHHHHCCeEEEE
Confidence 679999999999999987664
No 477
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=23.33 E-value=99 Score=22.25 Aligned_cols=24 Identities=21% Similarity=0.317 Sum_probs=17.5
Q ss_pred HHHHHHHHHHHhCCCcEEEEcCCC
Q psy4717 40 EDVEKVVQVAHDHNLVIIPFGGGT 63 (90)
Q Consensus 40 ~~v~~vv~~a~~~~i~v~~~G~G~ 63 (90)
+.+.++.+.+++.++|+++-||=.
T Consensus 198 ~~l~~v~~~~~~~~iPVIA~GGI~ 221 (366)
T 4fo4_A 198 TAIADAAGVANEYGIPVIADGGIR 221 (366)
T ss_dssp HHHHHHHHHHGGGTCCEEEESCCC
T ss_pred HHHHHHHHHHhhcCCeEEEeCCCC
Confidence 445666666677899999988853
No 478
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=23.32 E-value=73 Score=21.85 Aligned_cols=22 Identities=18% Similarity=0.200 Sum_probs=19.3
Q ss_pred CCHHHHHHHHHHHHhCCCcEEE
Q psy4717 37 ESTEDVEKVVQVAHDHNLVIIP 58 (90)
Q Consensus 37 ~s~~~v~~vv~~a~~~~i~v~~ 58 (90)
.|.+|..++++.|+++++.+.+
T Consensus 129 ~~~~ea~~l~~~a~~~g~~l~v 150 (393)
T 4fb5_A 129 PAYADAERMLATAERSGKVAAL 150 (393)
T ss_dssp SSHHHHHHHHHHHHHSSSCEEE
T ss_pred ccHHHHHHhhhhHHhcCCcccc
Confidence 5789999999999999988765
No 479
>3n0x_A Possible substrate binding protein of ABC transpo system; receptor family ligand binding region, structural genomics; HET: MSE; 1.50A {Rhodopseudomonas palustris} PDB: 3nnd_B
Probab=23.32 E-value=1.2e+02 Score=20.66 Aligned_cols=34 Identities=18% Similarity=0.074 Sum_probs=29.2
Q ss_pred CccEEEEcCCHHHHHHHHHHHHhCCCcEEEEcCC
Q psy4717 29 GTRYWCITESTEDVEKVVQVAHDHNLVIIPFGGG 62 (90)
Q Consensus 29 ~p~~vv~P~s~~~v~~vv~~a~~~~i~v~~~G~G 62 (90)
+..+|+=|-+......+..+|.+.++|++..+..
T Consensus 73 ~v~aiiG~~~s~~~~a~~~~~~~~~ip~i~~~~~ 106 (374)
T 3n0x_A 73 GADIAIGTSSSAAALADLPVAEENKKILIVEPAV 106 (374)
T ss_dssp CCSEEEECSSHHHHHHHHHHHHHHTCCEEECSCC
T ss_pred CceEEEcCCCcHHHHHHHHHHHHcCccEEEcCCC
Confidence 4788999999999999999999999998875543
No 480
>3ew8_A HD8, histone deacetylase 8; hydrolase, HDAC, metalloenzyme, arginase fold, HDAC8, histon deacetylase, hydroxamate inhibitor, unliganded; HET: B3N; 1.80A {Homo sapiens} SCOP: c.42.1.2 PDB: 3f06_A* 3ezp_A* 3ezt_A* 3f0r_A* 3f07_A* 2v5w_A* 2v5x_A* 3ewf_A* 3mz4_A* 3mz6_A* 3mz7_A* 3rqd_A* 3mz3_A* 1t64_A* 1t67_A* 1t69_A* 1vkg_A* 1w22_A* 3sff_A* 3sfh_A*
Probab=23.32 E-value=93 Score=22.83 Aligned_cols=27 Identities=22% Similarity=0.409 Sum_probs=21.4
Q ss_pred CHHHHHHHHHHHHhCCCcEEEEc-CCCC
Q psy4717 38 STEDVEKVVQVAHDHNLVIIPFG-GGTN 64 (90)
Q Consensus 38 s~~~v~~vv~~a~~~~i~v~~~G-~G~n 64 (90)
|.+...++++++.+.++|++..| ||-+
T Consensus 280 t~~g~~~~~~~l~~~~~p~l~~~gGGY~ 307 (388)
T 3ew8_A 280 TPVGIGKCLKYILQWQLATLILGGGGYN 307 (388)
T ss_dssp CHHHHHHHHHHHHTTCCEEEEECCCCCS
T ss_pred CHHHHHHHHHHHHhcCCCEEEEECCCCC
Confidence 56888899999999899988764 5655
No 481
>3sl1_A Arginase; metallohydrolase, hydrolase-hydrolase inhibit complex; HET: FB6; 1.90A {Plasmodium falciparum} PDB: 3mmr_A* 3sl0_A*
Probab=23.16 E-value=73 Score=23.64 Aligned_cols=30 Identities=10% Similarity=0.180 Sum_probs=22.4
Q ss_pred HHHHHHHHHHHhCCCcEEEEcCCCCCCCCc
Q psy4717 40 EDVEKVVQVAHDHNLVIIPFGGGTNVTGAV 69 (90)
Q Consensus 40 ~~v~~vv~~a~~~~i~v~~~G~G~n~~~~~ 69 (90)
+.|++.++.+-+.+.-.+++||+|+++.+.
T Consensus 172 ~~L~~~V~~il~~G~~PIvLGGDHSIalg~ 201 (413)
T 3sl1_A 172 KNLFDTMSNELRKKNFVLNIGGDHGVAFSS 201 (413)
T ss_dssp HHHHHHHHHHHTTTCEEEEEESSGGGHHHH
T ss_pred HHHHHHHHHHHHCCCEEEEECCchHhHHHH
Confidence 445566666667888888999999997554
No 482
>1uz5_A MOEA protein, 402AA long hypothetical molybdopterin biosynthesis MOEA protein; MOEA molybdopterin, MOCF biosynthesis; 2.05A {Pyrococcus horikoshii} SCOP: b.85.6.1 b.103.1.1 c.57.1.2
Probab=23.16 E-value=1.1e+02 Score=22.30 Aligned_cols=35 Identities=11% Similarity=0.152 Sum_probs=26.6
Q ss_pred cEEEEcCCHHHHHHHHHHHHhCCCcEEEEcCCCCCC
Q psy4717 31 RYWCITESTEDVEKVVQVAHDHNLVIIPFGGGTNVT 66 (90)
Q Consensus 31 ~~vv~P~s~~~v~~vv~~a~~~~i~v~~~G~G~n~~ 66 (90)
...+.|.+.+++.+.++.+.+ +.-+++..||++..
T Consensus 225 ~~~iv~Dd~~~i~~~l~~a~~-~~DlVittGG~s~g 259 (402)
T 1uz5_A 225 FMGVARDDKESLKALIEKAVN-VGDVVVISGGASGG 259 (402)
T ss_dssp EEEEECSSHHHHHHHHHHHHH-HCSEEEEECCC---
T ss_pred EEEEeCCCHHHHHHHHHHHhh-CCCEEEEcCCCCCC
Confidence 456889999999999987765 36799999999874
No 483
>2whl_A Beta-mannanase, baman5; glycoside hydrolase, hydrolase; HET: MAN BMA; 1.40A {Bacillus agaradhaerens} PDB: 2whj_A
Probab=23.12 E-value=86 Score=20.99 Aligned_cols=23 Identities=13% Similarity=0.472 Sum_probs=20.2
Q ss_pred cCCHHHHHHHHHHHHhCCCcEEE
Q psy4717 36 TESTEDVEKVVQVAHDHNLVIIP 58 (90)
Q Consensus 36 P~s~~~v~~vv~~a~~~~i~v~~ 58 (90)
+...+.+.+++++|.++|+.+++
T Consensus 60 ~~~~~~ld~~v~~a~~~Gi~Vil 82 (294)
T 2whl_A 60 KDDIDTIREVIELAEQNKMVAVV 82 (294)
T ss_dssp CCCHHHHHHHHHHHHTTTCEEEE
T ss_pred ccHHHHHHHHHHHHHHCCCEEEE
Confidence 45789999999999999998776
No 484
>3b3d_A YTBE protein, putative morphine dehydrogenase; aldo-keto reductase, oxidoreductase; 2.30A {Bacillus subtilis}
Probab=23.11 E-value=45 Score=23.08 Aligned_cols=19 Identities=0% Similarity=0.300 Sum_probs=16.2
Q ss_pred HHHHHHHHhCCCcEEEEcC
Q psy4717 43 EKVVQVAHDHNLVIIPFGG 61 (90)
Q Consensus 43 ~~vv~~a~~~~i~v~~~G~ 61 (90)
.+++.+|+++|+.+++++-
T Consensus 211 ~~ll~~c~~~gI~v~a~sP 229 (314)
T 3b3d_A 211 KELIRYCQNQGIQMEAWSP 229 (314)
T ss_dssp HHHHHHHHHHTCEEEEEST
T ss_pred HHHHHHHHHcCCEEEEecc
Confidence 3689999999999998854
No 485
>3f7j_A YVGN protein; aldo-keto reductase, oxidoreductase; 1.70A {Bacillus subtilis} PDB: 3d3f_A*
Probab=23.10 E-value=46 Score=22.56 Aligned_cols=18 Identities=0% Similarity=0.196 Sum_probs=16.1
Q ss_pred HHHHHHHHhCCCcEEEEc
Q psy4717 43 EKVVQVAHDHNLVIIPFG 60 (90)
Q Consensus 43 ~~vv~~a~~~~i~v~~~G 60 (90)
.+++.+|+++|+.+++++
T Consensus 173 ~~l~~~~~~~gi~v~a~s 190 (276)
T 3f7j_A 173 KELRDYCKGQGIQLEAWS 190 (276)
T ss_dssp HHHHHHHHHHTCEEEEES
T ss_pred HHHHHHHHHCCCEEEEec
Confidence 579999999999999885
No 486
>4g3h_A Arginase (ROCF); rossmann fold, hydrolytic enzyme, manganous ION BI hydrolysis, hydrolase; 2.20A {Helicobacter pylori}
Probab=23.08 E-value=61 Score=22.93 Aligned_cols=30 Identities=3% Similarity=0.019 Sum_probs=21.1
Q ss_pred HHHHHHHHHHHhCCCcEEEEcCCCCCCCCc
Q psy4717 40 EDVEKVVQVAHDHNLVIIPFGGGTNVTGAV 69 (90)
Q Consensus 40 ~~v~~vv~~a~~~~i~v~~~G~G~n~~~~~ 69 (90)
+.+++.++-+-+.+.-.+++||+|+++.+.
T Consensus 68 ~~l~~~v~~il~~g~~PivLGGdHsia~g~ 97 (330)
T 4g3h_A 68 ENLIPCMKEVFEKKEFPLILSSEHANMFGI 97 (330)
T ss_dssp HTHHHHHHHHHTSSSCEEEECSSGGGHHHH
T ss_pred HHHHHHHHHHHHCCCEEEEECCcchhhHHH
Confidence 445555666666776667899999986554
No 487
>3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311}
Probab=23.06 E-value=60 Score=19.42 Aligned_cols=25 Identities=24% Similarity=0.186 Sum_probs=21.0
Q ss_pred HHHHHHHHHHHhCCCcEEEEcCCCC
Q psy4717 40 EDVEKVVQVAHDHNLVIIPFGGGTN 64 (90)
Q Consensus 40 ~~v~~vv~~a~~~~i~v~~~G~G~n 64 (90)
+++.++++.+++.|+++.+.+++..
T Consensus 92 ~~~~~~l~~l~~~g~~~~i~s~~~~ 116 (214)
T 3e58_A 92 PDVLKVLNEVKSQGLEIGLASSSVK 116 (214)
T ss_dssp TTHHHHHHHHHHTTCEEEEEESSCH
T ss_pred chHHHHHHHHHHCCCCEEEEeCCcH
Confidence 4578889999999999999988763
No 488
>2jba_A Phosphate regulon transcriptional regulatory PROT; transcription factor, sensory transduction, phosphate regula transcription regulation; 1.45A {Escherichia coli} PDB: 2jba_B 1b00_A 2iyn_A 2jb9_A 1zes_A
Probab=23.05 E-value=1e+02 Score=16.85 Aligned_cols=26 Identities=4% Similarity=-0.102 Sum_probs=20.8
Q ss_pred ccEEEEcCCHHHHHHHHHHHHhCCCc
Q psy4717 30 TRYWCITESTEDVEKVVQVAHDHNLV 55 (90)
Q Consensus 30 p~~vv~P~s~~~v~~vv~~a~~~~i~ 55 (90)
-+++..|-+.+++.+.++.+.+..-|
T Consensus 100 ~~~l~Kp~~~~~l~~~i~~~~~~~~~ 125 (127)
T 2jba_A 100 DDCITKPFSPKELVARIKAVMRRISP 125 (127)
T ss_dssp SEEEEESCCHHHHHHHHHHHHHCCCC
T ss_pred CeEEeCCCCHHHHHHHHHHHHhcccC
Confidence 36889999999999999887765433
No 489
>2ioj_A Hypothetical protein AF_1212; NYSGXRC, PFAM:DRTGG, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.15A {Archaeoglobus fulgidus} SCOP: c.98.2.2
Probab=23.01 E-value=22 Score=21.64 Aligned_cols=31 Identities=10% Similarity=0.025 Sum_probs=15.5
Q ss_pred EEEEcCCHHHHHHHHHHHHhCCCcEEEEcCCCC
Q psy4717 32 YWCITESTEDVEKVVQVAHDHNLVIIPFGGGTN 64 (90)
Q Consensus 32 ~vv~P~s~~~v~~vv~~a~~~~i~v~~~G~G~n 64 (90)
.++.|.+.+++.... +.-.++|.+++.+|..
T Consensus 55 l~I~~G~r~~~~l~a--~~~~~~~~iIlt~g~~ 85 (139)
T 2ioj_A 55 ALVTGGDRSDLLLTA--LEMPNVRCLILTGNLE 85 (139)
T ss_dssp EEEEETTCHHHHHHH--TTCTTEEEEEEETTCC
T ss_pred EEEEcCCHHHHHHHH--HhCCCCcEEEEcCCCC
Confidence 556656666544311 1114566666665543
No 490
>3i32_A Heat resistant RNA dependent ATPase; RNA helicase, dimer, RNA recognition motif, ATP-BIND helicase, nucleotide-binding; 2.80A {Thermus thermophilus}
Probab=23.00 E-value=1.8e+02 Score=20.00 Aligned_cols=35 Identities=14% Similarity=0.109 Sum_probs=29.2
Q ss_pred CccEEEEcCCHHHHHHHHHHHHhCCCcEEEEcCCC
Q psy4717 29 GTRYWCITESTEDVEKVVQVAHDHNLVIIPFGGGT 63 (90)
Q Consensus 29 ~p~~vv~P~s~~~v~~vv~~a~~~~i~v~~~G~G~ 63 (90)
.-.++|+..+.+++..+.+...+.++++.++-|+-
T Consensus 28 ~~~~LVF~~t~~~~~~l~~~L~~~g~~~~~lhg~l 62 (300)
T 3i32_A 28 PDRAMVFTRTKAETEEIAQGLLRLGHPAQALHGDM 62 (300)
T ss_dssp CSSEEEECSSHHHHHHHHHHHHTTTCCEEEECSCC
T ss_pred CCCEEEEECCHHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 34778999999999999999989899888886653
No 491
>3ce9_A Glycerol dehydrogenase; NP_348253.1, 3-dehydroquinate syntha structural genomics, joint center for structural genomics; HET: MSE; 2.37A {Clostridium acetobutylicum atcc 824}
Probab=22.98 E-value=23 Score=24.93 Aligned_cols=26 Identities=15% Similarity=0.326 Sum_probs=19.0
Q ss_pred CHHHHHHHHHHHHhCCCc-EEEEcCCCC
Q psy4717 38 STEDVEKVVQVAHDHNLV-IIPFGGGTN 64 (90)
Q Consensus 38 s~~~v~~vv~~a~~~~i~-v~~~G~G~n 64 (90)
+.+.|.++ +.+++++.. ++.+|||+-
T Consensus 74 ~~~~v~~~-~~~~~~~~d~IIavGGGsv 100 (354)
T 3ce9_A 74 DFDEIGTN-AFKIPAEVDALIGIGGGKA 100 (354)
T ss_dssp BHHHHHHH-HTTSCTTCCEEEEEESHHH
T ss_pred CHHHHHHH-HHhhhcCCCEEEEECChHH
Confidence 77888888 888777764 455888764
No 492
>4aff_A Nitrogen regulatory protein P-II; signaling protein; HET: ATP FLC; 1.05A {Synechococcus elongatus} SCOP: d.58.5.1 PDB: 2xun_A* 2xul_A* 2xzw_A* 2xbp_A* 2v5h_G* 2jj4_D* 2xg8_A 1qy7_A 3n5b_A* 1ul3_A
Probab=22.93 E-value=54 Score=19.66 Aligned_cols=34 Identities=12% Similarity=-0.025 Sum_probs=24.9
Q ss_pred cEEEEcCCHHHHHHHHHHHHhCCCcEE-EEcCCCC
Q psy4717 31 RYWCITESTEDVEKVVQVAHDHNLVII-PFGGGTN 64 (90)
Q Consensus 31 ~~vv~P~s~~~v~~vv~~a~~~~i~v~-~~G~G~n 64 (90)
.++++|...++|.++|.-+.-.++.+. +.|-|..
T Consensus 5 ~AIIrp~kl~~vk~AL~~~G~~g~Tv~~V~G~G~q 39 (116)
T 4aff_A 5 EAIIRPFKLDEVKIALVNAGIVGMTVSEVRGFGRQ 39 (116)
T ss_dssp EEEECGGGHHHHHHHHHHTTCCCCEEEEEEECCCC
T ss_pred EEEECHHHHHHHHHHHHHCCCCeEEEEeeEeEccc
Confidence 478999999999999987766666655 3444553
No 493
>2wzm_A Aldo-keto reductase; oxidoreductase; HET: NA7; 1.64A {Mycobacterium smegmatis} PDB: 2wzt_A
Probab=22.87 E-value=64 Score=21.99 Aligned_cols=18 Identities=22% Similarity=0.372 Sum_probs=15.6
Q ss_pred HHHHHHHHhCCCcEEEEc
Q psy4717 43 EKVVQVAHDHNLVIIPFG 60 (90)
Q Consensus 43 ~~vv~~a~~~~i~v~~~G 60 (90)
.+++.+|+++|+.+++++
T Consensus 179 ~~l~~~~~~~gi~v~a~s 196 (283)
T 2wzm_A 179 AALREVNAGYNIVTEAYG 196 (283)
T ss_dssp HHHHHHHHHTTCEEEEEC
T ss_pred HHHHHHHHHCCCEEEEec
Confidence 369999999999988875
No 494
>3be7_A Zn-dependent arginine carboxypeptidase; unknown source, amidohydrolase, sargasso SEA, structural GEN protein structure initiative, PSI; HET: ARG; 2.30A {Unidentified} SCOP: b.92.1.9 c.1.9.18 PDB: 3dug_A*
Probab=22.84 E-value=80 Score=21.71 Aligned_cols=26 Identities=23% Similarity=0.473 Sum_probs=21.9
Q ss_pred CCHHHHHHHHHHHHhCCCcEEEEcCC
Q psy4717 37 ESTEDVEKVVQVAHDHNLVIIPFGGG 62 (90)
Q Consensus 37 ~s~~~v~~vv~~a~~~~i~v~~~G~G 62 (90)
-+.+++.++++.|++.|+++..--.+
T Consensus 203 ~~~~~l~~~~~~A~~~g~~v~~H~~~ 228 (408)
T 3be7_A 203 FTLEEMKAIVDEAHNHGMKVAAHAHG 228 (408)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEEEECS
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 36799999999999999999876543
No 495
>2epj_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.70A {Aeropyrum pernix} PDB: 2zsl_A* 2zsm_A*
Probab=22.84 E-value=58 Score=22.81 Aligned_cols=22 Identities=9% Similarity=0.197 Sum_probs=19.1
Q ss_pred CCHHHHHHHHHHHHhCCCcEEE
Q psy4717 37 ESTEDVEKVVQVAHDHNLVIIP 58 (90)
Q Consensus 37 ~s~~~v~~vv~~a~~~~i~v~~ 58 (90)
.+.+.++++.++|+++++.++.
T Consensus 221 ~~~~~l~~l~~l~~~~g~~lI~ 242 (434)
T 2epj_A 221 PRREFLAALQRLSRESGALLIL 242 (434)
T ss_dssp CCHHHHHHHHHHHHHHTCEEEE
T ss_pred CCHHHHHHHHHHHHHcCCEEEE
Confidence 3678899999999999988775
No 496
>1s1p_A Aldo-keto reductase family 1 member C3; TIM-barrel, oxidoreductase; HET: NAP; 1.20A {Homo sapiens} SCOP: c.1.7.1 PDB: 1s1r_A* 1s2a_A* 1s2c_A* 3uwe_A* 3r58_A* 3r43_A* 3r7m_A* 3r6i_A* 3r8h_A* 3r94_A* 3r8g_A* 1zq5_A* 1ry8_A* 1xf0_A* 1ry0_A* 2f38_A* 2fgb_A* 4dbs_A* 4dbu_A* 3gug_A* ...
Probab=22.80 E-value=63 Score=22.45 Aligned_cols=19 Identities=11% Similarity=0.541 Sum_probs=16.5
Q ss_pred HHHHHHHHhCCCcEEEEcC
Q psy4717 43 EKVVQVAHDHNLVIIPFGG 61 (90)
Q Consensus 43 ~~vv~~a~~~~i~v~~~G~ 61 (90)
.+++++|+++|+.+++++-
T Consensus 200 ~~l~~~~~~~gI~v~a~sp 218 (331)
T 1s1p_A 200 SKLLDFCKSKDIVLVAYSA 218 (331)
T ss_dssp HHHHHHHHHTTCEEEEEST
T ss_pred HHHHHHHHHcCCEEEEecc
Confidence 4799999999999998764
No 497
>3lop_A Substrate binding periplasmic protein; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 1.55A {Ralstonia solanacearum}
Probab=22.73 E-value=73 Score=21.50 Aligned_cols=35 Identities=17% Similarity=0.203 Sum_probs=29.1
Q ss_pred CccEEEEcCCHHHHHHHHH--HHHhCCCcEEEEcCCC
Q psy4717 29 GTRYWCITESTEDVEKVVQ--VAHDHNLVIIPFGGGT 63 (90)
Q Consensus 29 ~p~~vv~P~s~~~v~~vv~--~a~~~~i~v~~~G~G~ 63 (90)
+.++|+-|-+......+.. .+.+.++|++..+...
T Consensus 73 ~v~~iig~~~s~~~~~~~~~~~~~~~~iP~v~~~~~~ 109 (364)
T 3lop_A 73 NPVALLTVVGTANVEALMREGVLAEARLPLVGPATGA 109 (364)
T ss_dssp CEEEEECCCCHHHHHHHHHTTHHHHHTCCEESCSCCC
T ss_pred CcEEEEecCCCHHHHhhCchhhHHhcCCcEEEcccCc
Confidence 4778888888888889999 9999999998766544
No 498
>3ewt_E Tumor necrosis factor receptor superfamily member 6; calmodulin-peptide complex, FAS, death domain, calcium, calcium binding protein; 2.40A {Homo sapiens}
Probab=22.72 E-value=63 Score=14.48 Aligned_cols=13 Identities=8% Similarity=0.230 Sum_probs=7.9
Q ss_pred HHHHHHHHHhCCC.
Q psy4717 42 VEKVVQVAHDHNL. 54 (90)
Q Consensus 42 v~~vv~~a~~~~i. 54 (90)
+.++.++++++|+
T Consensus 13 ~~~Vk~fvR~~gi. 25 (25)
T 3ewt_E 13 LSQVKGFVRKNGVx 26 (26)
T ss_pred HHHHHHHHHHcCC.
Confidence 3556666677664
No 499
>3jy6_A Transcriptional regulator, LACI family; NYSGXRC, PSI-II, protein S initiative, structural genomics; 1.97A {Lactobacillus brevis}
Probab=22.69 E-value=90 Score=20.10 Aligned_cols=30 Identities=10% Similarity=0.013 Sum_probs=21.6
Q ss_pred ccEEE-EcCCHHHHHHHHHHHHhCCCcEEEEcCC
Q psy4717 30 TRYWC-ITESTEDVEKVVQVAHDHNLVIIPFGGG 62 (90)
Q Consensus 30 p~~vv-~P~s~~~v~~vv~~a~~~~i~v~~~G~G 62 (90)
++.++ .|.+. ...++.+.+.++|++.++..
T Consensus 64 vdgiIi~~~~~---~~~~~~l~~~~iPvV~i~~~ 94 (276)
T 3jy6_A 64 FDGLILQSFSN---PQTVQEILHQQMPVVSVDRE 94 (276)
T ss_dssp CSEEEEESSCC---HHHHHHHHTTSSCEEEESCC
T ss_pred CCEEEEecCCc---HHHHHHHHHCCCCEEEEecc
Confidence 55544 44444 67788888999999999764
No 500
>3ttq_A Dextransucrase; (beta/alpha)8 barrel, transferase; HET: PG4; 1.90A {Leuconostoc mesenteroides} PDB: 3tto_A*
Probab=22.66 E-value=75 Score=26.70 Aligned_cols=22 Identities=18% Similarity=0.421 Sum_probs=20.3
Q ss_pred CCHHHHHHHHHHHHhCCCcEEE
Q psy4717 37 ESTEDVEKVVQVAHDHNLVIIP 58 (90)
Q Consensus 37 ~s~~~v~~vv~~a~~~~i~v~~ 58 (90)
.+.+|++++|+.|+++||.|+.
T Consensus 910 Gt~edfk~LV~alH~~GI~VIl 931 (1108)
T 3ttq_A 910 GTDGDLRATIQALHHANMQVMA 931 (1108)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEE
T ss_pred CCHHHHHHHHHHHHHCCCEEEE
Confidence 6889999999999999999875
Done!