BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy4720
(95 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q00174|LAMA_DROME Laminin subunit alpha OS=Drosophila melanogaster GN=LanA PE=1 SV=2
Length = 3712
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 43/72 (59%), Positives = 50/72 (69%)
Query: 1 MTISFLHEALPCQCDIDGSKSFECEQFGGQCQCKPNVIGRRCEMCATGYYGFPDCHPCNC 60
+T + ALPC CD GS SFEC FGGQCQCKPNVI R C C + YYGFPDC PC C
Sbjct: 1364 LTADYNSGALPCNCDYAGSTSFECHPFGGQCQCKPNVIERTCGACRSRYYGFPDCKPCKC 1423
Query: 61 PFTAVCDSYTGK 72
P +A+C+ TG+
Sbjct: 1424 PNSAMCEPTTGE 1435
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 10 LPCQCDIDGSKSFECEQFGGQCQCKPNVIGRRCEMCATGYYGFPDCHPCNCPFTAVCDSY 69
LPC CD GS+ C GQC C+PN GR+C+ C G+Y FP C CNC V D +
Sbjct: 630 LPCHCDSHGSQGVSCNS-DGQCLCQPNFDGRQCDSCKEGFYNFPSCEDCNCDPAGVIDKF 688
Query: 70 TG 71
G
Sbjct: 689 AG 690
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 39/66 (59%), Gaps = 5/66 (7%)
Query: 12 CQCDIDGSKSFECE-QFGGQCQCKPNVIGRRCEMCATGYYGFPDCHPCNC----PFTAVC 66
C+C+++G+ + CE + G QC CK N G C+ CA GYYGFP+C C C T C
Sbjct: 448 CECNLNGTNGYHCEAESGQQCPCKINFAGAYCKQCAEGYYGFPECKACECNKIGSITNDC 507
Query: 67 DSYTGK 72
+ TG+
Sbjct: 508 NVTTGE 513
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 37/65 (56%), Gaps = 5/65 (7%)
Query: 12 CQCDIDGSKSFECEQFGGQCQCKPNVIGRRCEMCATGYYGFPDCHPCNCPFTA----VCD 67
C CD G++S C + GQC C+ G RC+ C G+Y +PDC PCNC T CD
Sbjct: 541 CDCDNQGTESEICNKQSGQCICREGFGGPRCDQCLPGFYNYPDCKPCNCSSTGSSAITCD 600
Query: 68 SYTGK 72
+ TGK
Sbjct: 601 N-TGK 604
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Query: 11 PCQCDIDGSKSFECEQFGGQCQCKPNVIGRRCEMCATGYYGFPDCHPCNC 60
PC C GS + C+ G +C C N G++C +C GYY +PDC PC+C
Sbjct: 586 PCNCSSTGSSAITCDNTG-KCNCLNNFAGKQCTLCTAGYYSYPDCLPCHC 634
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 33/53 (62%), Gaps = 4/53 (7%)
Query: 23 ECEQFGGQCQCKPNVIGRRCEMCATGYYGFPDCHPCNC--PFT--AVCDSYTG 71
+C+ F G C+C+ N+ GR C++C+ GY+ FP C C+C P T VCD G
Sbjct: 1479 QCDLFNGTCECRQNIEGRACDVCSNGYFNFPHCEQCSCHKPGTELEVCDKIDG 1531
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 40/90 (44%), Gaps = 7/90 (7%)
Query: 11 PCQCDIDGSKSFECEQFGGQCQCKPNVIGRRCEMCATGYYGFPD-----CHPCNCPFTAV 65
PC C+ S+ F C G+CQC P VIG RC+ C + D C+ C+ V
Sbjct: 2063 PCNCNQGYSRGFGCNPNTGKCQCLPGVIGDRCDACPNRWVLIKDEGCQECNNCHHALLDV 2122
Query: 66 CDSYTGKLAQVL--IQVVTFPNYPSCKLWY 93
D ++ VL VT + S KL Y
Sbjct: 2123 TDRMRYQIDSVLEDFNSVTLAFFTSQKLNY 2152
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 34/66 (51%), Gaps = 5/66 (7%)
Query: 11 PCQCDIDGSKSFECEQFGGQCQCKPNVIGRRCEMCATGYYGFPDCHPCNCPFTAV----C 66
PCQCD S CE+ G C+C+ C+ CA GYYG+P+C C C C
Sbjct: 402 PCQCDYFFSTG-HCEEETGNCECRAAFQPPSCDSCAYGYYGYPNCRECECNLNGTNGYHC 460
Query: 67 DSYTGK 72
++ +G+
Sbjct: 461 EAESGQ 466
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 35/66 (53%), Gaps = 8/66 (12%)
Query: 12 CQCDIDGSKSFECEQFGGQCQCKPNVIGRRCEMCATGYYGFPD---CHPCNC---PFTAV 65
C CD G+++ C+ F G C C NVIG RC+ C +YGF C C+C +
Sbjct: 1970 CDCDDLGTQT--CDPFVGVCTCHENVIGDRCDRCKPDHYGFESGVGCRACDCGAASNSTQ 2027
Query: 66 CDSYTG 71
CD +TG
Sbjct: 2028 CDPHTG 2033
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 4/65 (6%)
Query: 12 CQCDIDGSKSFECEQFGGQCQCKPNVIGRRCEMCATGYYGFPDCHPCNCPF----TAVCD 67
C+C+ GS + +C G+C+C N G CE C GY+ +P C C+C + +C+
Sbjct: 495 CECNKIGSITNDCNVTTGECKCLTNFGGDNCERCKHGYFNYPTCSYCDCDNQGTESEICN 554
Query: 68 SYTGK 72
+G+
Sbjct: 555 KQSGQ 559
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 31/63 (49%), Gaps = 6/63 (9%)
Query: 12 CQCDIDGSKSFECEQFGGQCQCKPNVIGRRCEMCATGYYGFPDCHPCNCPF------TAV 65
C C G++ C++ G C CK NV+GR C+ C G Y + +P C T+
Sbjct: 1514 CSCHKPGTELEVCDKIDGACFCKKNVVGRDCDQCVDGTYNLQESNPDGCTTCFCFGKTSR 1573
Query: 66 CDS 68
CDS
Sbjct: 1574 CDS 1576
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 31/63 (49%), Gaps = 13/63 (20%)
Query: 23 ECEQFGGQ--CQCKPNVIGRRCEMCATGYYGFPD-----CHPCNCPFT------AVCDSY 69
E + G Q C+CKP G RCE CA G+YG P+ C PC C CD+
Sbjct: 1875 EISESGDQIHCECKPGYTGPRCESCANGFYGEPESIGQVCKPCECSGNINPEDQGSCDTR 1934
Query: 70 TGK 72
TG+
Sbjct: 1935 TGE 1937
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Query: 18 GSKSFECEQFGGQCQCKPNVIGRRCEMCATGYYGFPD--CHPCNC 60
S S +C+ G C CK V GR+C+ CA ++ + C PCNC
Sbjct: 2022 ASNSTQCDPHTGHCACKSGVTGRQCDRCAVDHWKYEKDGCTPCNC 2066
Score = 37.4 bits (85), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 34/72 (47%), Gaps = 11/72 (15%)
Query: 12 CQCDIDGSKSF--ECEQFGGQCQCKPNVIGRRCEMCATGYYGFPD-----CHPCNC---- 60
C C DG+ S C GQC CKP+ GRRC+ C G + C C+C
Sbjct: 732 CDCWTDGTISALDTCTSKSGQCPCKPHTQGRRCQECRDGTFDLDSASLFGCKDCSCDVGG 791
Query: 61 PFTAVCDSYTGK 72
+ +VCD +G+
Sbjct: 792 SWQSVCDKISGQ 803
Score = 36.2 bits (82), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Query: 12 CQCDIDGSKSFECEQFGGQCQCKPNVIGRRCEMCATGYYGFPDCH 56
C CD+ GS C++ GQC+C P + G C T ++ FP H
Sbjct: 785 CSCDVGGSWQSVCDKISGQCKCHPRITGLACTQPLTTHF-FPTLH 828
Score = 34.3 bits (77), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 9/70 (12%)
Query: 11 PCQC--DIDGSKSFECEQFGGQC-QCKPNVIGRRCEMCATGYYG----FPDCHPCNCPF- 62
PC+C +I+ C+ G+C +C N G C +CA G+YG +C C+C
Sbjct: 1916 PCECSGNINPEDQGSCDTRTGECLRCLNNTFGAACNLCAPGFYGDAIKLKNCQSCDCDDL 1975
Query: 63 -TAVCDSYTG 71
T CD + G
Sbjct: 1976 GTQTCDPFVG 1985
Score = 30.4 bits (67), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 28/64 (43%), Gaps = 8/64 (12%)
Query: 15 DIDGSKSFECEQFGGQCQCKPNVIGRRCEMCATGYYGFPD------CHPCNCP-FTAVCD 67
D DG+ ++ +C C P G CE CA GYY P C PC C + CD
Sbjct: 1761 DADGTGEYQFLAVE-RCSCPPGYSGHSCEDCAPGYYRDPSGPYGGYCIPCECNGHSETCD 1819
Query: 68 SYTG 71
TG
Sbjct: 1820 CATG 1823
Score = 28.9 bits (63), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 10/60 (16%)
Query: 10 LPCQCDIDGSKSFECEQFGGQC-QCKPNVIGRRCEMCATGYYGFP------DCHPCNCPF 62
+PC+C+ S C+ G C +C+ G CE C +GYYG DC C CP
Sbjct: 1807 IPCECN---GHSETCDCATGICSKCQHGTEGDHCERCVSGYYGNATNGTPGDCMICACPL 1863
>sp|Q21313|EPI1_CAEEL Laminin-like protein epi-1 OS=Caenorhabditis elegans GN=epi-1 PE=1
SV=1
Length = 3672
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 41/72 (56%), Positives = 48/72 (66%)
Query: 1 MTISFLHEALPCQCDIDGSKSFECEQFGGQCQCKPNVIGRRCEMCATGYYGFPDCHPCNC 60
+T F AL C C GS+SF+CEQ+GGQC+CKP VIGRRCE CA GYY FP+C C C
Sbjct: 1404 LTTDFNAAALSCDCVAQGSESFQCEQYGGQCKCKPGVIGRRCERCAPGYYNFPECIKCQC 1463
Query: 61 PFTAVCDSYTGK 72
CD TG+
Sbjct: 1464 NAGQQCDERTGQ 1475
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 32/61 (52%), Gaps = 4/61 (6%)
Query: 12 CQCDIDGSKSFECEQFGGQCQCKPNVIGRRCEMCATGYYGFPDCHPCNCPFTA----VCD 67
C CD G S EC+ GQC C N GR C+ CA G+Y +PDC C C + CD
Sbjct: 610 CACDGAGITSPECDATSGQCPCNGNFTGRTCDKCAAGFYNYPDCRGCECLLSGAKGQTCD 669
Query: 68 S 68
S
Sbjct: 670 S 670
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 4/65 (6%)
Query: 12 CQCDIDGSKSFECEQFGGQCQCKPNVIGRRCEMCATGYYGFPDCHPCNCPFTAV----CD 67
C CD G++ C+Q GQC CK G +C+ C +YG+P+C C C + CD
Sbjct: 564 CNCDPMGTEGGVCDQTTGQCLCKEGFAGDKCDRCDIAFYGYPNCKACACDGAGITSPECD 623
Query: 68 SYTGK 72
+ +G+
Sbjct: 624 ATSGQ 628
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Query: 12 CQCDIDGSKSFECEQFGGQCQCKPNVIGRRCEMCATGYYGFPDCHPCNCPFTAVCDSYTG 71
C+C + G+K C+ GQC CK N G RC+ C +Y FP C CNC + V + G
Sbjct: 656 CECLLSGAKGQTCDS-NGQCYCKGNFEGERCDRCKPNFYNFPICEECNCNPSGVTRDFQG 714
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 34/67 (50%), Gaps = 5/67 (7%)
Query: 10 LPCQCDIDGSKSFECEQFGGQCQCKPNVIGRRCEMCATGYYGFPDCHPCNCP----FTAV 65
+ C CD GS+ C GQC+CKP G C+ C GY+G DC CNC V
Sbjct: 517 VECVCDATGSEHGNCSASTGQCECKPAYAGLSCDKCQVGYFG-DDCKFCNCDPMGTEGGV 575
Query: 66 CDSYTGK 72
CD TG+
Sbjct: 576 CDQTTGQ 582
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 33/56 (58%), Gaps = 2/56 (3%)
Query: 7 HEALPCQ-CDIDGSK-SFECEQFGGQCQCKPNVIGRRCEMCATGYYGFPDCHPCNC 60
+E PC+ CD D K + C + G+C+C P +G C+ CA+GYY P C PC C
Sbjct: 419 NEPQPCKVCDCDPDKHTGACAEETGKCECLPRFVGEDCDQCASGYYDAPKCKPCEC 474
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 32/51 (62%), Gaps = 2/51 (3%)
Query: 12 CQCDIDGSK--SFECEQFGGQCQCKPNVIGRRCEMCATGYYGFPDCHPCNC 60
C C GS+ + C+ GQC C+ ++ GR+C+ C G+YGFP C+ C+C
Sbjct: 1506 CGCHPQGSEGGNLVCDPESGQCLCRESMGGRQCDRCLAGFYGFPHCYGCSC 1556
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 40/83 (48%), Gaps = 13/83 (15%)
Query: 3 ISFLHEA--LPCQCDIDGSKS--FECEQFGGQCQCKPNVIGRRCEMCATGYYGFPD---- 54
+ + HE C C+++G+ S C+ GQC CK N GRRC+ CA G+Y
Sbjct: 745 LQYHHEDGCRSCDCNVNGTISGLNTCDLKTGQCMCKKNADGRRCDQCADGFYRLNSYNQM 804
Query: 55 -CHPCNC----PFTAVCDSYTGK 72
C C+C A CD +G+
Sbjct: 805 GCESCHCDIGGALRAECDITSGQ 827
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Query: 12 CQCDIDGSKSFECEQFGGQCQCKPNVIGRRCEMCATGYYGFP 53
C CDI G+ EC+ GQC+C+P V G RC+ +Y FP
Sbjct: 809 CHCDIGGALRAECDITSGQCKCRPRVTGLRCDQPIENHY-FP 849
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 31/63 (49%), Gaps = 8/63 (12%)
Query: 18 GSKSF--ECEQFGGQCQCKPNVIGRRCEMCATGY--YGFPDCHPCNC----PFTAVCDSY 69
G+ +F +C GQC C+P G RCE C GY YG C C+C VCD
Sbjct: 2040 GTAAFNTQCNVENGQCTCRPGATGMRCEHCEHGYWNYGEHGCDKCDCEADLSMGTVCDVR 2099
Query: 70 TGK 72
TG+
Sbjct: 2100 TGQ 2102
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 21/36 (58%), Gaps = 5/36 (13%)
Query: 30 QCQCKPNVIGRRCEMCATGYYGFP-----DCHPCNC 60
QC CKP G RC+ CA+G++G P C PC C
Sbjct: 1904 QCNCKPGYTGDRCDRCASGFFGHPQISGESCSPCQC 1939
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 34/78 (43%), Gaps = 3/78 (3%)
Query: 12 CQCDIDGSKSFECEQFGGQCQCKPNVIGRRCEMCATGYYGFPDCHP---CNCPFTAVCDS 68
C C+ G+ C+ QC+CK NV G RCE C G + +P NC V DS
Sbjct: 1554 CSCNRAGTTEEICDATNAQCKCKENVYGGRCEACKAGTFDLSAENPLGCVNCFCFGVTDS 1613
Query: 69 YTGKLAQVLIQVVTFPNY 86
+ V I V ++
Sbjct: 1614 CRSSMYPVTIMSVDMSSF 1631
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 31/66 (46%), Gaps = 10/66 (15%)
Query: 4 SFLHEALPCQCDIDGSKSFECEQFGGQC-QCKPNVIGRRCEMCATGYYGFP------DCH 56
SFL +PC+C+ S C+ G C C+ N G CE C G+YG DC
Sbjct: 1822 SFLGACVPCECN---GHSATCDPDTGICTDCEHNTNGDHCEFCNEGHYGNATNGSPYDCM 1878
Query: 57 PCNCPF 62
C CPF
Sbjct: 1879 ACACPF 1884
Score = 34.3 bits (77), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 22/39 (56%)
Query: 11 PCQCDIDGSKSFECEQFGGQCQCKPNVIGRRCEMCATGY 49
PC+C+++G+ C GQC CK G CE CA GY
Sbjct: 471 PCECNVNGTIGDVCLPEDGQCPCKAGFGGTFCETCADGY 509
Score = 33.1 bits (74), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 19/35 (54%)
Query: 24 CEQFGGQCQCKPNVIGRRCEMCATGYYGFPDCHPC 58
C+ G C+CK NV G C+ C ++GF C C
Sbjct: 2000 CDNKSGGCECKINVEGDSCDRCKPDHWGFSKCQGC 2034
Score = 32.3 bits (72), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 19/42 (45%)
Query: 12 CQCDIDGSKSFECEQFGGQCQCKPNVIGRRCEMCATGYYGFP 53
C C+ D S C+ GQC C+ G RC+ C Y P
Sbjct: 2084 CDCEADLSMGTVCDVRTGQCHCQEGATGSRCDQCLPSYLRIP 2125
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 33/70 (47%), Gaps = 9/70 (12%)
Query: 11 PCQCDIDG--SKSFECEQFGGQC-QCKPNVIGRRCEMCATGYYG----FPDCHPCNCP-- 61
PCQC+ + + S C G C C+ N GR CE CA +YG +C C C
Sbjct: 1936 PCQCNGNNNLTDSRSCHPNSGDCYLCEQNTDGRHCESCAAWFYGDAVTAKNCSSCECSQC 1995
Query: 62 FTAVCDSYTG 71
+ CD+ +G
Sbjct: 1996 GSQYCDNKSG 2005
Score = 29.6 bits (65), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 24/49 (48%), Gaps = 7/49 (14%)
Query: 30 QCQCKPNVIGRRCEMCATGYYGFPD------CHPCNCP-FTAVCDSYTG 71
QCQC G C++CA+GY+ C PC C +A CD TG
Sbjct: 1796 QCQCPAPYTGPSCQLCASGYHRVQSGSFLGACVPCECNGHSATCDPDTG 1844
>sp|Q61292|LAMB2_MOUSE Laminin subunit beta-2 OS=Mus musculus GN=Lamb2 PE=2 SV=2
Length = 1799
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/70 (54%), Positives = 47/70 (67%), Gaps = 6/70 (8%)
Query: 9 ALPCQCDIDGSKSFECEQFGGQCQCKPNVIGRRCEMCATGYYGF--PDCHPCNC----PF 62
ALPCQCD GS S EC GGQC+CKP V+GRRC++CATGYYGF C C C
Sbjct: 781 ALPCQCDPQGSLSSECSPHGGQCRCKPGVVGRRCDVCATGYYGFGPAGCQACQCSPDGAL 840
Query: 63 TAVCDSYTGK 72
+A+C+ +G+
Sbjct: 841 SALCEGTSGQ 850
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 43/78 (55%), Gaps = 5/78 (6%)
Query: 11 PCQCDIDGSKSFECEQFGGQCQCKPNVIGRRCEMCATGYYGFPDCHPCNCPFTAVCDSYT 70
PC CD+ G+ +C++ GQC+C+ ++IGRRCE GY+ P T ++
Sbjct: 524 PCDCDVGGALDPQCDEATGQCRCRQHMIGRRCEQVQPGYF-----RPFLDHLTWEAEAAQ 578
Query: 71 GKLAQVLIQVVTFPNYPS 88
G+ +V+ ++VT PS
Sbjct: 579 GQGLEVVERLVTNRETPS 596
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 12 CQCDIDGSKSFECEQFGGQCQCKPNVIGRRCEMCATGYYG-FPDCHPCNCPF 62
C CD G +C + G C C+P V G RC+ CA G+ G FP CHPC+ F
Sbjct: 1144 CDCDPRGIDKPQCHRSTGHCSCRPGVSGVRCDQCARGFSGVFPACHPCHACF 1195
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 37/81 (45%), Gaps = 20/81 (24%)
Query: 11 PCQCDIDGSKSF-ECEQ--------FGGQCQCKPNVIGRRCEMCATGYYGFPDCHPCNC- 60
PC CD GS+ C+ GQC+CK +V+G RC+ C G++G P C
Sbjct: 412 PCDCDPMGSQDGGRCDSHDDPVLGLVSGQCRCKEHVVGTRCQQCRDGFFGLSASDPRGCQ 471
Query: 61 ----------PFTAVCDSYTG 71
P ++ CDS +G
Sbjct: 472 RCQCNSRGTVPGSSPCDSSSG 492
Score = 35.4 bits (80), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 24/52 (46%), Gaps = 2/52 (3%)
Query: 11 PCQCDIDGSKSFECEQFGGQCQCKPNVIGRRCEMCATGYYGFP--DCHPCNC 60
PC C ++ C +F GQC C GR C C Y+G P C C+C
Sbjct: 1095 PCACHPSRARGPTCNEFTGQCHCHAGFGGRTCSECQELYWGDPGLQCRACDC 1146
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 32/71 (45%), Gaps = 10/71 (14%)
Query: 12 CQCDIDGS--KSFECEQFGGQCQCKPNVIGRRCEMCATGYYGFPD----CHPCNCPFTAV 65
CQC+ G+ S C+ G C CK V G C+ C G++G C PC+C
Sbjct: 473 CQCNSRGTVPGSSPCDSSSGTCFCKRLVTGHGCDRCLPGHWGLSHDLLGCRPCDCDVGGA 532
Query: 66 ----CDSYTGK 72
CD TG+
Sbjct: 533 LDPQCDEATGQ 543
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 29/56 (51%), Gaps = 7/56 (12%)
Query: 24 CEQFGGQCQCKPNVIGRRCEMCATGYYGFPD---CHPCNC-PFTA---VCDSYTGK 72
C+ GQC C P+V G C+ CA ++ F C PC C P A C+ +TG+
Sbjct: 1059 CDPSTGQCPCLPHVQGLNCDHCAPNFWNFTSGRGCQPCACHPSRARGPTCNEFTGQ 1114
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 24/53 (45%), Gaps = 11/53 (20%)
Query: 31 CQCKPNVIGRRCEMCATGYYGFPD-----CHPCNCPFTA------VCDSYTGK 72
CQC+ G RCE CA G++G P C C C CD +TG+
Sbjct: 955 CQCREGYTGLRCEACAPGHFGDPSKPGGRCQLCECSGNIDPMDPDACDPHTGQ 1007
Score = 30.4 bits (67), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 10/58 (17%)
Query: 11 PCQCDIDGSKSFECEQFGGQC-QCKPNVIGRRCEMCATGYYGFP------DCHPCNCP 61
PC C+ ++ EC+ G C C+ G CE C G++G P C PC CP
Sbjct: 877 PCVCN---GRADECDTHTGACLGCRDYTGGEHCERCIAGFHGDPRLPYGGQCRPCPCP 931
>sp|P15800|LAMB2_RAT Laminin subunit beta-2 OS=Rattus norvegicus GN=Lamb2 PE=2 SV=1
Length = 1801
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/70 (54%), Positives = 46/70 (65%), Gaps = 6/70 (8%)
Query: 9 ALPCQCDIDGSKSFECEQFGGQCQCKPNVIGRRCEMCATGYYGF--PDCHPCNC----PF 62
ALPCQCD GS S EC GGQC+CKP V+GRRC+ CATGYYGF C C C
Sbjct: 783 ALPCQCDPQGSLSSECNPHGGQCRCKPGVVGRRCDACATGYYGFGPAGCQACQCSPDGAL 842
Query: 63 TAVCDSYTGK 72
+A+C+ +G+
Sbjct: 843 SALCEGTSGQ 852
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 43/78 (55%), Gaps = 5/78 (6%)
Query: 11 PCQCDIDGSKSFECEQFGGQCQCKPNVIGRRCEMCATGYYGFPDCHPCNCPFTAVCDSYT 70
PC CD+ G+ +C++ GQC C+P++IGRRCE GY+ P T +
Sbjct: 524 PCDCDVGGALDPQCDEATGQCPCRPHMIGRRCEQVQPGYF-----RPFLDHLTWEAEGAH 578
Query: 71 GKLAQVLIQVVTFPNYPS 88
G++ +V+ ++VT PS
Sbjct: 579 GQVLEVVERLVTNRETPS 596
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 12 CQCDIDGSKSFECEQFGGQCQCKPNVIGRRCEMCATGYYG-FPDCHPCNCPF 62
C CD G +C + G C C+P V G RC+ CA G+ G FP CHPC+ F
Sbjct: 1146 CDCDPRGIDKPQCHRSTGHCSCRPGVSGVRCDQCARGFSGVFPACHPCHACF 1197
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 36/81 (44%), Gaps = 20/81 (24%)
Query: 11 PCQCDIDGSKSF-ECEQ--------FGGQCQCKPNVIGRRCEMCATGYYGFPDCHPCNC- 60
PC CD GS+ C+ GQC+CK +V+G RC+ C G++G +P C
Sbjct: 412 PCDCDPMGSQDGGRCDSHDDPVLGLVSGQCRCKEHVVGTRCQQCRDGFFGLSASNPRGCQ 471
Query: 61 ----------PFTAVCDSYTG 71
P CDS +G
Sbjct: 472 RCQCNSRGTVPGGTPCDSSSG 492
Score = 33.9 bits (76), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 2/52 (3%)
Query: 11 PCQCDIDGSKSFECEQFGGQCQCKPNVIGRRCEMCATGYYGFP--DCHPCNC 60
PC C ++ C +F GQC C GR C C ++G P C C+C
Sbjct: 1097 PCACHPSRARGPTCNEFTGQCHCHAGFGGRTCSECQELHWGDPGLQCRACDC 1148
Score = 32.7 bits (73), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 31/71 (43%), Gaps = 10/71 (14%)
Query: 12 CQCDIDGS--KSFECEQFGGQCQCKPNVIGRRCEMCATGYYGFPD----CHPCNCPFTAV 65
CQC+ G+ C+ G C CK V G C+ C G++G C PC+C
Sbjct: 473 CQCNSRGTVPGGTPCDSSSGTCFCKRLVTGDGCDRCLPGHWGLSHDLLGCRPCDCDVGGA 532
Query: 66 ----CDSYTGK 72
CD TG+
Sbjct: 533 LDPQCDEATGQ 543
Score = 32.0 bits (71), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 29/56 (51%), Gaps = 7/56 (12%)
Query: 24 CEQFGGQCQCKPNVIGRRCEMCATGYYGFPD---CHPCNC-PFTA---VCDSYTGK 72
C+ GQC C P+V G C+ CA ++ F C PC C P A C+ +TG+
Sbjct: 1061 CDPSTGQCPCLPHVQGLSCDRCAPNFWNFTSGRGCQPCACHPSRARGPTCNEFTGQ 1116
Score = 30.8 bits (68), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 23/53 (43%), Gaps = 11/53 (20%)
Query: 31 CQCKPNVIGRRCEMCATGYYGFPD-----CHPCNCPFT------AVCDSYTGK 72
C C+ G RCE CA G++G P C C C CD +TG+
Sbjct: 957 CHCRAGYTGLRCEACAPGHFGDPSKPGGRCQLCECSGNIDPTDPGACDPHTGQ 1009
Score = 30.4 bits (67), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 10/58 (17%)
Query: 11 PCQCDIDGSKSFECEQFGGQC-QCKPNVIGRRCEMCATGYYGFP------DCHPCNCP 61
PC C+ ++ EC+ G C C+ G CE C G++G P C PC CP
Sbjct: 879 PCVCN---GRADECDAHTGACLGCRDYTGGEHCERCIAGFHGDPRLPYGGQCRPCPCP 933
>sp|Q61001|LAMA5_MOUSE Laminin subunit alpha-5 OS=Mus musculus GN=Lama5 PE=1 SV=4
Length = 3718
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 49/72 (68%), Gaps = 1/72 (1%)
Query: 1 MTISFLHEALPCQCDIDGSKSFECEQFGGQCQCKPNVIGRRCEMCATGYYGFPDCHPCNC 60
+++ + + ALPC C G+ S CE FGGQC C+ +VIGR C CATGY+GFP+C PC+C
Sbjct: 1432 LSLFYNNGALPCGCHEVGAVSPTCEPFGGQCPCRGHVIGRDCSRCATGYWGFPNCRPCDC 1491
Query: 61 PFTAVCDSYTGK 72
+CD TG+
Sbjct: 1492 -GARLCDELTGQ 1502
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 36/53 (67%), Gaps = 4/53 (7%)
Query: 24 CEQFGGQCQCKPNVIGRRCEMCATGYYGFPDCHPCNC----PFTAVCDSYTGK 72
C+ GQC+C+PNV GRRC+ CA G+YG+P C PC+C +VCD TG+
Sbjct: 1548 CDMDSGQCRCRPNVAGRRCDTCAPGFYGYPSCRPCDCHEAGTMASVCDPLTGQ 1600
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 29/51 (56%)
Query: 10 LPCQCDIDGSKSFECEQFGGQCQCKPNVIGRRCEMCATGYYGFPDCHPCNC 60
+PC C DGS C+ GQC+C+P V G C+MC G Y FP C +C
Sbjct: 681 IPCHCSADGSLHTTCDPTTGQCRCRPRVTGLHCDMCVPGAYNFPYCEAGSC 731
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 34/65 (52%), Gaps = 5/65 (7%)
Query: 12 CQCDIDGSKSFECEQFGGQCQCKPNVIGRRCEMCATGYYGFPDCHPCNC----PFTAVCD 67
C CD G+ +C GG C C+P G C+ C+ G+YGFP C PC+C CD
Sbjct: 638 CACDPRGALDQQC-GVGGLCHCRPGYTGATCQECSPGFYGFPSCIPCHCSADGSLHTTCD 696
Query: 68 SYTGK 72
TG+
Sbjct: 697 PTTGQ 701
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 34/59 (57%), Gaps = 3/59 (5%)
Query: 12 CQCDIDGSKSFECEQ--FGGQCQCKPNVIGRRCEMCATGYYGFPDCHPCNCPFTAVCDS 68
C C+ G++ C + G+C CKPN G CE+CA G++G P CHPC C V +S
Sbjct: 500 CDCNAAGTQGNACRKDPRLGRCVCKPNFRGAHCELCAPGFHG-PSCHPCQCSSPGVANS 557
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 33/63 (52%), Gaps = 4/63 (6%)
Query: 11 PCQCDIDGSKSFECEQFGGQCQCKPNVIGRRCEMCATGYYGFPD--CHPCNCPFTAVCDS 68
PC C +K EC GQC C+P G +C CA GY+G P+ C C CP CD
Sbjct: 2071 PCACG-PAAKGSECHPQSGQCHCQPGTTGPQCLECAPGYWGLPEKGCRRCQCP-RGHCDP 2128
Query: 69 YTG 71
+TG
Sbjct: 2129 HTG 2131
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Query: 12 CQCDIDGSKSFECEQFGGQCQCKPNVIGRRCEMCATGYYGFPDCHPCNCPFTAVCDSYTG 71
C C G+ C++ G+CQC+P G C+ C GY+G+PDCH C C D G
Sbjct: 593 CGCSPAGTLPEGCDE-AGRCQCRPGFDGPHCDRCLPGYHGYPDCHACACDPRGALDQQCG 651
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 27/50 (54%)
Query: 11 PCQCDIDGSKSFECEQFGGQCQCKPNVIGRRCEMCATGYYGFPDCHPCNC 60
PCQC G + C+ GQC C+ G RC+ CA GY+ FP C C C
Sbjct: 546 PCQCSSPGVANSLCDPESGQCMCRTGFEGDRCDHCALGYFHFPLCQLCGC 595
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 7 HEALPCQCDIDGSKSFECEQFGGQCQCKPNVIGRRCEMCATGYYGFPDCHP 57
H PC C+ D + CE G+C C+PN G C CA GY FP C+P
Sbjct: 429 HVCRPCDCESDFTDG-TCEDLTGRCYCRPNFTGELCAACAEGYTDFPHCYP 478
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 25/50 (50%)
Query: 11 PCQCDIDGSKSFECEQFGGQCQCKPNVIGRRCEMCATGYYGFPDCHPCNC 60
PC C G+ + C+ GQC CK NV G RC+ C G + +P C
Sbjct: 1581 PCDCHEAGTMASVCDPLTGQCHCKENVQGSRCDQCRVGTFSLDAANPKGC 1630
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 25/47 (53%)
Query: 13 QCDIDGSKSFECEQFGGQCQCKPNVIGRRCEMCATGYYGFPDCHPCN 59
+CD + C+ G+C CK V G+RC+ C GY+GF C C
Sbjct: 2024 RCDCSPCGTETCDPQSGRCLCKAGVTGQRCDRCLEGYFGFEQCQGCR 2070
Score = 36.6 bits (83), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Query: 12 CQCDIDGSKSFECEQFGGQCQCKPNVIGRRCEMCATGYYGFPDCH 56
C+CD+ G+ CE G C+C+PN G C A +Y PD H
Sbjct: 834 CRCDVGGALGQGCEPKTGACRCRPNTQGPTCSEPAKDHY-LPDLH 877
Score = 34.3 bits (77), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 5/36 (13%)
Query: 30 QCQCKPNVIGRRCEMCATGYYGFP-----DCHPCNC 60
QC C+P G CE CA G++G P C PC+C
Sbjct: 1938 QCLCRPGYAGASCERCAPGFFGNPLVLGSSCQPCDC 1973
Score = 32.7 bits (73), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 34/75 (45%), Gaps = 16/75 (21%)
Query: 11 PCQCDIDGSKSF---ECEQFGGQCQ-CKPNVIGRRCEMCATGYYG---FP------DCHP 57
PC C +G + +C+ G C+ C + G CE CA G+YG P DC P
Sbjct: 1970 PCDCSGNGDPNMIFSDCDPLTGACRGCLRHTTGPHCERCAPGFYGNALLPGNCTRCDCSP 2029
Query: 58 CNCPFTAVCDSYTGK 72
C T CD +G+
Sbjct: 2030 CG---TETCDPQSGR 2041
Score = 30.8 bits (68), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Query: 12 CQCDIDGSKSFECE-QFGGQCQCKPNVIGRRCEMCATGYYGF 52
C CD G+ E Q GQC CK +V G+ C C G++G
Sbjct: 782 CSCDPRGTLGGVTECQGNGQCFCKAHVCGKTCAACKDGFFGL 823
>sp|Q16787|LAMA3_HUMAN Laminin subunit alpha-3 OS=Homo sapiens GN=LAMA3 PE=1 SV=2
Length = 3333
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 48/71 (67%), Gaps = 2/71 (2%)
Query: 3 ISFLHE-ALPCQCDIDGSKSFECEQFGGQCQCKPNVIGRRCEMCATGYYGFPDCHPCNCP 61
++F H+ ALPC+C G+ C GGQC C+PNVIGR+C CATG+YGFP C PC+C
Sbjct: 1256 VAFYHKGALPCECHPTGATGPHCSPEGGQCPCQPNVIGRQCTRCATGHYGFPRCKPCSCG 1315
Query: 62 FTAVCDSYTGK 72
+C+ TG+
Sbjct: 1316 -RRLCEEMTGQ 1325
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 36/53 (67%), Gaps = 4/53 (7%)
Query: 23 ECEQFGGQCQCKPNVIGRRCEMCATGYYGFPDCHPCNCPFT----AVCDSYTG 71
EC++ GQC+CKP + GR+C+ CA+G+Y FP+C PCNC VCD TG
Sbjct: 1370 ECDRDSGQCRCKPRITGRQCDRCASGFYRFPECVPCNCNRDGTEPGVCDPGTG 1422
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Query: 10 LPCQCDIDGSKSFECEQFGGQCQCKPNVIGRRCEMCATGYYGFPDC 55
+PC CD + + CEQ G+C CKPN G CE CA GYY FP C
Sbjct: 424 IPCSCDPEHADG--CEQGSGRCHCKPNFHGDNCEKCAIGYYNFPFC 467
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 25/45 (55%)
Query: 12 CQCDIDGSKSFECEQFGGQCQCKPNVIGRRCEMCATGYYGFPDCH 56
C C GS C GQC+C+P V G+RC+ C +G Y FP C
Sbjct: 536 CWCSALGSYQMPCSSVTGQCECRPGVTGQRCDRCLSGAYDFPHCQ 580
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 5/65 (7%)
Query: 12 CQCDIDGSKSFECEQFGGQCQCKPNVIGRRCEMCATGYYGFPDCHPCNC----PFTAVCD 67
C C+++G C+ G +C C+P V G RC+ C +G+Y FP C C C + C
Sbjct: 491 CDCNLEGVLPEICDAHG-RCLCRPGVEGPRCDTCRSGFYSFPICQACWCSALGSYQMPCS 549
Query: 68 SYTGK 72
S TG+
Sbjct: 550 SVTGQ 554
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Query: 12 CQCDIDGSKSFECEQFGGQCQCKPNVIGRRCEMCATGYYGFPDCH 56
CQCDI G+ S C G CQC+ +V+G+ C+ YY FPD H
Sbjct: 684 CQCDIGGALSSMCSGPSGVCQCREHVVGKVCQRPENNYY-FPDLH 727
Score = 35.4 bits (80), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 24/43 (55%)
Query: 8 EALPCQCDIDGSKSFECEQFGGQCQCKPNVIGRRCEMCATGYY 50
E +PC C+ DG++ C+ G C CK NV G C +C G +
Sbjct: 1401 ECVPCNCNRDGTEPGVCDPGTGACLCKENVEGTECNVCREGSF 1443
Score = 34.3 bits (77), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 27/58 (46%), Gaps = 7/58 (12%)
Query: 10 LPCQCDIDGSKSFECEQFGGQC-QCKPNVIGRRCEMCATGYYG---FPDCHPCNCPFT 63
+PC C+ S +C+ G C C+ N G CE C GYYG C C CP T
Sbjct: 1685 VPCNCN---GHSNQCQDGSGICVNCQHNTAGEHCERCQEGYYGNAVHGSCRACPCPHT 1739
Score = 33.5 bits (75), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 5/36 (13%)
Query: 30 QCQCKPNVIGRRCEMCATGYYGFP-----DCHPCNC 60
+C CK G +CE CA GY+G P C PC+C
Sbjct: 1754 RCSCKAGYTGTQCERCAPGYFGNPQKFGGSCQPCSC 1789
Score = 32.7 bits (73), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 26/64 (40%), Gaps = 7/64 (10%)
Query: 12 CQCDIDG--SKSFECEQFGGQCQCKPNVIGRRCEMCATGYYGFPD-----CHPCNCPFTA 64
C+C G S + EC Q G C CK +V G C+ C GY+ C C C
Sbjct: 631 CKCHKAGTVSGTGECRQGDGDCHCKSHVGGDSCDTCEDGYFALEKSNYFGCQGCQCDIGG 690
Query: 65 VCDS 68
S
Sbjct: 691 ALSS 694
>sp|O15230|LAMA5_HUMAN Laminin subunit alpha-5 OS=Homo sapiens GN=LAMA5 PE=1 SV=8
Length = 3695
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 46/72 (63%), Gaps = 1/72 (1%)
Query: 1 MTISFLHEALPCQCDIDGSKSFECEQFGGQCQCKPNVIGRRCEMCATGYYGFPDCHPCNC 60
+++ + + A PC C G+ CE FGGQC C +VIGR C CATGY+GFP+C PC+C
Sbjct: 1427 LSLFYNNGARPCGCHEVGATGPTCEPFGGQCPCHAHVIGRDCSRCATGYWGFPNCRPCDC 1486
Query: 61 PFTAVCDSYTGK 72
+CD TG+
Sbjct: 1487 -GARLCDELTGQ 1497
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 35/53 (66%), Gaps = 4/53 (7%)
Query: 24 CEQFGGQCQCKPNVIGRRCEMCATGYYGFPDCHPCNC----PFTAVCDSYTGK 72
C+ GQC+C+PNV GRRC+ C+ G++G+P C PC+C VCD TG+
Sbjct: 1543 CDTDSGQCKCRPNVTGRRCDTCSPGFHGYPRCRPCDCHEAGTAPGVCDPLTGQ 1595
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 28/51 (54%)
Query: 10 LPCQCDIDGSKSFECEQFGGQCQCKPNVIGRRCEMCATGYYGFPDCHPCNC 60
+PC C +GS C+ GQC C+P V G RC+ C G Y FP C +C
Sbjct: 675 VPCHCSAEGSLHAACDPRSGQCSCRPRVTGLRCDTCVPGAYNFPYCEAGSC 725
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 35/64 (54%), Gaps = 4/64 (6%)
Query: 11 PCQCDIDGSKSFECEQFGGQCQCKPNVIGRRCEMCATGYYGFPD--CHPCNCPFTAVCDS 68
PC C ++ EC GQC C+P +G +C CA GY+G P+ C C CP CD
Sbjct: 2069 PCACG-PAAEGSECHPQSGQCHCRPGTMGPQCRECAPGYWGLPEQGCRRCQCP-GGRCDP 2126
Query: 69 YTGK 72
+TG+
Sbjct: 2127 HTGR 2130
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Query: 12 CQCDIDGSKSFECEQFGGQCQCKPNVIGRRCEMCATGYYGFPDCHP 57
C C+ D + CE G+C C+PN G RC++CA G+ GFP C+P
Sbjct: 429 CNCESDFTDG-TCEDLTGRCYCRPNFSGERCDVCAEGFTGFPSCYP 473
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 5/65 (7%)
Query: 12 CQCDIDGSKSFECEQFGGQCQCKPNVIGRRCEMCATGYYGFPDCHPCNC----PFTAVCD 67
C CD G+ C GG C+C+P G C+ C+ G++GFP C PC+C A CD
Sbjct: 632 CTCDPRGALDQLCGA-GGLCRCRPGYTGTACQECSPGFHGFPSCVPCHCSAEGSLHAACD 690
Query: 68 SYTGK 72
+G+
Sbjct: 691 PRSGQ 695
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Query: 12 CQCDIDGSKSFECEQ--FGGQCQCKPNVIGRRCEMCATGYYGFPDCHPCNCPFTAVCD 67
C C G++ C + G+C CKPN G CE+CA G+YG P C PC C V D
Sbjct: 494 CDCSAAGTQGNACRKDPRVGRCLCKPNFQGTHCELCAPGFYG-PGCQPCQCSSPGVAD 550
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 26/50 (52%)
Query: 11 PCQCDIDGSKSFECEQFGGQCQCKPNVIGRRCEMCATGYYGFPDCHPCNC 60
PCQC G C+ GQC+C+ G C+ CA GY+ FP C C C
Sbjct: 540 PCQCSSPGVADDRCDPDTGQCRCRVGFEGATCDRCAPGYFHFPLCQLCGC 589
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Query: 12 CQCDIDGSKSFECEQFGGQCQCKPNVIGRRCEMCATGYYGFPDCHPCNCPFTAVCDSYTG 71
C C G+ C++ G+C C+P G C+ C GY+GFP+C C C D G
Sbjct: 587 CGCSPAGTLPEGCDE-AGRCLCQPEFAGPHCDRCRPGYHGFPNCQACTCDPRGALDQLCG 645
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 22/40 (55%), Gaps = 3/40 (7%)
Query: 24 CEQFGGQCQCKPNVIGRRCEMCATGYYGFP---DCHPCNC 60
C+ G C CK V GRRC+ C G++GF C PC C
Sbjct: 2033 CDPHSGHCLCKAGVTGRRCDRCQEGHFGFDGCGGCRPCAC 2072
Score = 38.1 bits (87), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 25/50 (50%)
Query: 11 PCQCDIDGSKSFECEQFGGQCQCKPNVIGRRCEMCATGYYGFPDCHPCNC 60
PC C G+ C+ GQC CK NV G +C+ C+ G + +P C
Sbjct: 1576 PCDCHEAGTAPGVCDPLTGQCYCKENVQGPKCDQCSLGTFSLDAANPKGC 1625
Score = 37.4 bits (85), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Query: 12 CQCDIDGSKSFECEQFGGQCQCKPNVIGRRCEMCATGYYGFPDCH 56
C+CDI G+ CE G C+C+PN G C A +Y PD H
Sbjct: 829 CRCDIGGALGQSCEPRTGVCRCRPNTQGPTCSEPARDHY-LPDLH 872
Score = 36.2 bits (82), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 36/74 (48%), Gaps = 16/74 (21%)
Query: 11 PCQCDIDGSKSF---ECEQFGGQCQ-CKPNVIGRRCEMCATGYYG---FP------DCHP 57
PC C +G + +C+ G C+ C + G RCE+CA G+YG P DC P
Sbjct: 1968 PCDCSGNGDPNLLFSDCDPLTGACRGCLRHTTGPRCEICAPGFYGNALLPGNCTRCDCTP 2027
Query: 58 CNCPFTAVCDSYTG 71
C T CD ++G
Sbjct: 2028 CG---TEACDPHSG 2038
Score = 35.8 bits (81), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
Query: 12 CQCDIDGSKS--FECEQFGGQCQCKPNVIGRRCEMCATGYYGF 52
C CD+ G+ EC+ GQC CKP+V G+ C C G++G
Sbjct: 776 CSCDLRGTLGGVAECQPGTGQCFCKPHVCGQACASCKDGFFGL 818
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 20/36 (55%), Gaps = 5/36 (13%)
Query: 30 QCQCKPNVIGRRCEMCATGYYGFP-----DCHPCNC 60
QC CKP G CE CA G++G P C PC+C
Sbjct: 1936 QCLCKPGYAGASCERCAPGFFGNPLVLGSSCQPCDC 1971
>sp|P55268|LAMB2_HUMAN Laminin subunit beta-2 OS=Homo sapiens GN=LAMB2 PE=1 SV=2
Length = 1798
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 45/70 (64%), Gaps = 6/70 (8%)
Query: 9 ALPCQCDIDGSKSFECEQFGGQCQCKPNVIGRRCEMCATGYYGF--PDCHPCNC----PF 62
ALPCQC+ GS S EC GGQC CKP V+GRRC++CA GYYGF C C C
Sbjct: 780 ALPCQCNPQGSLSSECNPHGGQCLCKPGVVGRRCDLCAPGYYGFGPTGCQACQCSHEGAL 839
Query: 63 TAVCDSYTGK 72
+++C+ +G+
Sbjct: 840 SSLCEKTSGQ 849
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 12 CQCDIDGSKSFECEQFGGQCQCKPNVIGRRCEMCATGYYG-FPDCHPCNCPF 62
C CD G + +C +F G C C+P V G RC+ CA G+ G FP CHPC+ F
Sbjct: 1143 CDCDSRGIDTPQCHRFTGHCSCRPGVSGVRCDQCARGFSGIFPACHPCHACF 1194
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 5/78 (6%)
Query: 11 PCQCDIDGSKSFECEQFGGQCQCKPNVIGRRCEMCATGYYGFPDCHPCNCPFTAVCDSYT 70
PC CD+ G+ +C++ GQC C+ +++GRRCE GY+ P +
Sbjct: 521 PCDCDVGGALDPQCDEGTGQCHCRQHMVGRRCEQVQPGYF-----RPFLDHLIWEAEDTR 575
Query: 71 GKLAQVLIQVVTFPNYPS 88
G++ V+ ++VT PS
Sbjct: 576 GQVLDVVERLVTPGETPS 593
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 6/76 (7%)
Query: 2 TISFLHEALPCQCDIDGSKSFECEQFGGQCQCKPNVIGRRCEMCATGYYGFP--DCHPCN 59
++ H PC C ++ C +F GQC C+ GR C C ++G P CH C+
Sbjct: 1085 NLTSGHGCQPCACHPSRARGPTCNEFTGQCHCRAGFGGRTCSECQELHWGDPGLQCHACD 1144
Query: 60 CPFTAV----CDSYTG 71
C + C +TG
Sbjct: 1145 CDSRGIDTPQCHRFTG 1160
Score = 37.0 bits (84), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 33/71 (46%), Gaps = 10/71 (14%)
Query: 12 CQCDIDGS--KSFECEQFGGQCQCKPNVIGRRCEMCATGYYGFPD----CHPCNCPFTAV 65
CQC+ G+ S C+ G C CK V GR C+ C G++G C PC+C
Sbjct: 470 CQCNARGTVPGSTPCDPNSGSCYCKRLVTGRGCDRCLPGHWGLSHDLLGCRPCDCDVGGA 529
Query: 66 ----CDSYTGK 72
CD TG+
Sbjct: 530 LDPQCDEGTGQ 540
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 11/54 (20%)
Query: 29 GQCQCKPNVIGRRCEMCATGYYGFP-----DCHPCNC------PFTAVCDSYTG 71
GQC+CK +V+G RC+ C G++G C C C P + CD +G
Sbjct: 436 GQCRCKEHVVGTRCQQCRDGFFGLSISDRLGCRRCQCNARGTVPGSTPCDPNSG 489
Score = 32.7 bits (73), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 28/56 (50%), Gaps = 7/56 (12%)
Query: 24 CEQFGGQCQCKPNVIGRRCEMCATGYYGFPD---CHPCNC-PFTA---VCDSYTGK 72
C+ GQC C PNV G C+ CA ++ C PC C P A C+ +TG+
Sbjct: 1058 CDPSSGQCPCLPNVQGPSCDRCAPNFWNLTSGHGCQPCACHPSRARGPTCNEFTGQ 1113
Score = 30.0 bits (66), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 23/53 (43%), Gaps = 11/53 (20%)
Query: 31 CQCKPNVIGRRCEMCATGYYGFPD-----CHPCNCPFTA------VCDSYTGK 72
C C+ G RCE CA G++G P C C C CD +TG+
Sbjct: 954 CHCRAGYTGLRCEACAPGHFGDPSRPGGRCQLCECSGNIDPMDPDACDPHTGQ 1006
Score = 29.6 bits (65), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 26/58 (44%), Gaps = 10/58 (17%)
Query: 11 PCQCDIDGSKSFECEQFGGQC-QCKPNVIGRRCEMCATGYYGFP------DCHPCNCP 61
PC C+ + EC G C C+ + G CE C G++G P C PC CP
Sbjct: 876 PCVCN---GHADECNTHTGACLGCRDHTGGEHCERCIAGFHGDPRLPYGGQCRPCPCP 930
>sp|P02469|LAMB1_MOUSE Laminin subunit beta-1 OS=Mus musculus GN=Lamb1 PE=1 SV=3
Length = 1786
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 49/76 (64%), Gaps = 7/76 (9%)
Query: 4 SFLHE-ALPCQCDIDGSKSFECEQFGGQCQCKPNVIGRRCEMCATGYYGF-PD-CHPCNC 60
+ +H+ L C+CD GS S C+ GGQCQC+PNV+GR C CA G +GF P+ C PC+C
Sbjct: 764 ALIHQTGLACECDPQGSLSSVCDPNGGQCQCRPNVVGRTCNRCAPGTFGFGPNGCKPCDC 823
Query: 61 PF----TAVCDSYTGK 72
+A CD+ TG+
Sbjct: 824 HLQGSASAFCDAITGQ 839
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Query: 11 PCQCDIDGSKSFECEQFGGQCQCKPNVIGRRCEMCATGYYGFPDCHPCNCPFTAV-CDSY 69
PC C + GS S C+ GQC C + R+C+ C GY+GFP C PC C A+ CD+
Sbjct: 820 PCDCHLQGSASAFCDAITGQCHCFQGIYARQCDRCLPGYWGFPSCQPCQCNGHALDCDTV 879
Query: 70 TGK 72
TG+
Sbjct: 880 TGE 882
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Query: 8 EALPCQCDIDGSKSFECEQFGGQCQCKPNVIGRRCEMCATGYYG-FPDCHPCNCPFTAVC 66
E C CD G ++ +C+Q GQC C V G RC+ C GY G FPDC PC+ F A+
Sbjct: 1128 ECRACDCDPRGIETPQCDQSTGQCVCVEGVEGPRCDKCTRGYSGVFPDCTPCHQCF-ALW 1186
Query: 67 DSYTGKL 73
D+ G+L
Sbjct: 1187 DAIIGEL 1193
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 26/40 (65%)
Query: 11 PCQCDIDGSKSFECEQFGGQCQCKPNVIGRRCEMCATGYY 50
PC CD+ G+ + C + GQC C P++IGR+C +GYY
Sbjct: 509 PCDCDLGGALNNSCSEDSGQCSCLPHMIGRQCNEVESGYY 548
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 41/90 (45%), Gaps = 8/90 (8%)
Query: 11 PCQCDIDGSKSFECEQFGGQCQCKPNVIGRRCEMCATGYYGFPD--CHPCNCPFTAV--- 65
PC C+ S C +F GQCQC P GR C C ++G PD C C+C +
Sbjct: 1083 PCNCNAAHSFGPSCNEFTGQCQCMPGFGGRTCSECQELFWGDPDVECRACDCDPRGIETP 1142
Query: 66 -CDSYTGKLAQVLIQVVTFPNYPSCKLWYN 94
CD TG+ V ++ V P C Y+
Sbjct: 1143 QCDQSTGQC--VCVEGVEGPRCDKCTRGYS 1170
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 30/56 (53%), Gaps = 7/56 (12%)
Query: 24 CEQFGGQCQCKPNVIGRRCEMCATGYYGFPD---CHPCNC----PFTAVCDSYTGK 72
C++ GQC C PNVIG+ C+ CA + C PCNC F C+ +TG+
Sbjct: 1047 CDKATGQCSCLPNVIGQNCDRCAPNTWQLASGTGCGPCNCNAAHSFGPSCNEFTGQ 1102
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 34/81 (41%), Gaps = 20/81 (24%)
Query: 11 PCQCDIDGSKS---------FECEQFGGQCQCKPNVIGRRCEMCATGYYGFPDCHPCNC- 60
PC CD GS++ F GQC+CK +V G RC++C G+Y P C
Sbjct: 397 PCTCDPAGSENGGICDGYTDFSVGLIAGQCRCKLHVEGERCDVCKEGFYDLSAEDPYGCK 456
Query: 61 ----------PFTAVCDSYTG 71
P CDS TG
Sbjct: 457 SCACNPLGTIPGGNPCDSETG 477
Score = 37.4 bits (85), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 28/58 (48%), Gaps = 10/58 (17%)
Query: 11 PCQCDIDGSKSFECEQFGGQC-QCKPNVIGRRCEMCATGYYGFP------DCHPCNCP 61
PCQC+ + +C+ G+C C+ G CE C GYYG P C PC CP
Sbjct: 866 PCQCN---GHALDCDTVTGECLSCQDYTTGHNCERCLAGYYGDPIIGSGDHCRPCPCP 920
Score = 36.6 bits (83), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 25/53 (47%), Gaps = 11/53 (20%)
Query: 31 CQCKPNVIGRRCEMCATGYYGFP-----DCHPCNCPFT------AVCDSYTGK 72
C C P IG RC+ CA+G++G P C PC C CD TG+
Sbjct: 944 CVCDPGYIGSRCDDCASGFFGNPSDFGGSCQPCQCHHNIDTTDPEACDKETGR 996
Score = 32.3 bits (72), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 6/65 (9%)
Query: 11 PCQC--DIDGSKSFECEQFGGQC-QCKPNVIGRRCEMCATGYYG---FPDCHPCNCPFTA 64
PCQC +ID + C++ G+C +C + G C++C GYYG DC C C +
Sbjct: 975 PCQCHHNIDTTDPEACDKETGRCLKCLYHTEGDHCQLCQYGYYGDALRQDCRKCVCNYLG 1034
Query: 65 VCDSY 69
+
Sbjct: 1035 TVKEH 1039
Score = 30.8 bits (68), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 4/43 (9%)
Query: 24 CEQFGGQCQCKPNVIGRRCEMCATGYYGFPD----CHPCNCPF 62
C+ G C CK V G+RC+ C ++G + C PC+C
Sbjct: 472 CDSETGYCYCKRLVTGQRCDQCLPQHWGLSNDLDGCRPCDCDL 514
Score = 30.4 bits (67), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 25/57 (43%), Gaps = 14/57 (24%)
Query: 28 GGQC-QCKPNVIGRRCEMCATGYYGFPD--------CHPCNC-----PFTAVCDSYT 70
GG C C+ N +GR CE C Y+ P+ C PC C +CD YT
Sbjct: 359 GGVCDNCQHNTMGRNCEQCKPFYFQHPERDIRDPNLCEPCTCDPAGSENGGICDGYT 415
>sp|A4D0S4|LAMB4_HUMAN Laminin subunit beta-4 OS=Homo sapiens GN=LAMB4 PE=2 SV=1
Length = 1761
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Query: 18 GSKSFECEQFGGQCQCKPNVIGRRCEMCATGYYGFPDCHPCNC-PFTAVCDSYTG 71
GSK C+Q GQC C V GRRC+ C GY+GFP CHPC C F +CD TG
Sbjct: 823 GSKDTVCDQVTGQCPCHGEVSGRRCDRCLAGYFGFPSCHPCPCNRFAELCDPETG 877
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 33/66 (50%), Gaps = 6/66 (9%)
Query: 12 CQCDIDGSKSFECEQFGGQCQCKPNVIGRRCEMCATGYYGFP--DCHPCNCPFTA----V 65
C CD S+S C+Q GQC CK G+RC C YYG P C PC+C +
Sbjct: 1080 CDCDPRTSQSSHCDQLTGQCPCKLGYGGKRCSECQENYYGDPPGRCIPCDCNRAGTQKPI 1139
Query: 66 CDSYTG 71
CD TG
Sbjct: 1140 CDPDTG 1145
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 29/50 (58%)
Query: 4 SFLHEALPCQCDIDGSKSFECEQFGGQCQCKPNVIGRRCEMCATGYYGFP 53
+ LH PC CDI G+ S C GQC+C+P+V GR C A GY+ P
Sbjct: 498 NHLHGCSPCDCDIGGAYSNVCSPKNGQCECRPHVTGRSCSEPAPGYFFAP 547
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 41/91 (45%), Gaps = 21/91 (23%)
Query: 2 TISFLHEALPCQCDIDGSKSF---------ECEQFGGQCQCKPNVIGRRCEMCATGYYGF 52
TIS + +PC+CD DG+ S GQC CK NV G +C+ C +YG
Sbjct: 385 TISDPYACIPCECDPDGTISGGICVSHSDPALGSVAGQCLCKENVEGAKCDQCKPNHYGL 444
Query: 53 P-----DCHPCNC------PFTAVCDSYTGK 72
C PC+C PF CD TG+
Sbjct: 445 SATDPLGCQPCDCNPLGSLPFL-TCDVDTGQ 474
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Query: 10 LPCQCDIDGSKSFECEQFGGQCQCKPNVIGRRCEMCATGY-YGFPDCHPCN 59
+PC C+ G++ C+ G C+C+ V G+RC+ CA G+ FP C C+
Sbjct: 1126 IPCDCNRAGTQKPICDPDTGMCRCREGVSGQRCDRCARGHSQEFPTCLQCH 1176
Score = 37.7 bits (86), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 34/71 (47%), Gaps = 9/71 (12%)
Query: 11 PCQCDIDGSKSF-ECEQFGGQCQCKPNVIGRRCEMCATGYYGFPD----CHPCNC----P 61
PC C+ GS F C+ GQC C V G CE C GY+G + C PC+C
Sbjct: 454 PCDCNPLGSLPFLTCDVDTGQCLCLSYVTGAHCEECTVGYWGLGNHLHGCSPCDCDIGGA 513
Query: 62 FTAVCDSYTGK 72
++ VC G+
Sbjct: 514 YSNVCSPKNGQ 524
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 32/77 (41%), Gaps = 16/77 (20%)
Query: 12 CQCDIDGSKSFECEQFGGQCQCK---------PNVIGRRCEMCATGYYGF---PDCHPCN 59
C C G EC GG C C PNV G C+ CA GY+ C C+
Sbjct: 1022 CSCHASGVSPMECPPGGGACLCDPVTGACPCLPNVTGLACDRCADGYWNLVPGRGCQSCD 1081
Query: 60 C-PFTAV---CDSYTGK 72
C P T+ CD TG+
Sbjct: 1082 CDPRTSQSSHCDQLTGQ 1098
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 17/37 (45%), Gaps = 4/37 (10%)
Query: 37 VIGRRCEMCATGYYGFPD----CHPCNCPFTAVCDSY 69
GR CE C GYYG P C PC CP + Y
Sbjct: 886 TTGRNCERCIDGYYGNPSSGQPCRPCLCPDDPSSNQY 922
Score = 30.0 bits (66), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 6/61 (9%)
Query: 11 PCQCD--IDGSKSFECEQFGGQC-QCKPNVIGRRCEMCATGYYGFP---DCHPCNCPFTA 64
PC C+ ID + C + G+C +C N G C++C G+YG C C+C +
Sbjct: 969 PCACNNNIDVTDPESCSRVTGECLRCLHNTQGANCQLCKPGHYGSALNQTCRRCSCHASG 1028
Query: 65 V 65
V
Sbjct: 1029 V 1029
>sp|P07942|LAMB1_HUMAN Laminin subunit beta-1 OS=Homo sapiens GN=LAMB1 PE=1 SV=2
Length = 1786
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 44/76 (57%), Gaps = 7/76 (9%)
Query: 4 SFLHE-ALPCQCDIDGSKSFECEQFGGQCQCKPNVIGRRCEMCATGYYGF--PDCHPCNC 60
+ LH+ L C+CD GS S C+ GGQCQC+PNV+GR C CA G +GF C PC C
Sbjct: 764 ALLHQTGLACECDPQGSLSSVCDPNGGQCQCRPNVVGRTCNRCAPGTFGFGPSGCKPCEC 823
Query: 61 PF----TAVCDSYTGK 72
A C+ TG+
Sbjct: 824 HLQGSVNAFCNPVTGQ 839
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 11 PCQCDIDGSKSFECEQFGGQCQCKPNVIGRRCEMCATGYYGFPDCHPCNCPFTA-VCDSY 69
PC+C + GS + C GQC C V R+C+ C G++GFP C PC C A CD
Sbjct: 820 PCECHLQGSVNAFCNPVTGQCHCFQGVYARQCDRCLPGHWGFPSCQPCQCNGHADDCDPV 879
Query: 70 TGK 72
TG+
Sbjct: 880 TGE 882
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Query: 8 EALPCQCDIDGSKSFECEQFGGQCQCKPNVIGRRCEMCATGYYG-FPDCHPCN 59
E C CD G ++ +C+Q GQC C V G RC+ C GY G FPDC PC+
Sbjct: 1128 ECRACDCDPRGIETPQCDQSTGQCVCVEGVEGPRCDKCTRGYSGVFPDCTPCH 1180
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 41/90 (45%), Gaps = 8/90 (8%)
Query: 11 PCQCDIDGSKSFECEQFGGQCQCKPNVIGRRCEMCATGYYGFPD--CHPCNCPFTAV--- 65
PC C+ S C +F GQCQC P GR C C ++G PD C C+C +
Sbjct: 1083 PCNCNAAHSFGPSCNEFTGQCQCMPGFGGRTCSECQELFWGDPDVECRACDCDPRGIETP 1142
Query: 66 -CDSYTGKLAQVLIQVVTFPNYPSCKLWYN 94
CD TG+ V ++ V P C Y+
Sbjct: 1143 QCDQSTGQC--VCVEGVEGPRCDKCTRGYS 1170
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 25/40 (62%)
Query: 11 PCQCDIDGSKSFECEQFGGQCQCKPNVIGRRCEMCATGYY 50
PC CD+ G+ + C GQC C+P++IGR+C GYY
Sbjct: 509 PCDCDLGGALNNSCFAESGQCSCRPHMIGRQCNEVEPGYY 548
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 7/57 (12%)
Query: 23 ECEQFGGQCQCKPNVIGRRCEMCATGYYGFPD---CHPCNC----PFTAVCDSYTGK 72
+C++ GQC C PNVIG+ C+ CA + C PCNC F C+ +TG+
Sbjct: 1046 QCDKATGQCLCLPNVIGQNCDRCAPNTWQLASGTGCDPCNCNAAHSFGPSCNEFTGQ 1102
Score = 37.4 bits (85), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 25/53 (47%), Gaps = 11/53 (20%)
Query: 31 CQCKPNVIGRRCEMCATGYYGFP-----DCHPCNCPFT------AVCDSYTGK 72
C C P IG RC+ CA+GY+G P C PC C CD TG+
Sbjct: 944 CVCDPGYIGSRCDDCASGYFGNPSEVGGSCQPCQCHNNIDTTDPEACDKETGR 996
Score = 36.2 bits (82), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 29/58 (50%), Gaps = 10/58 (17%)
Query: 11 PCQCDIDGSKSFECEQFGGQC-QCKPNVIGRRCEMCATGYYGFP------DCHPCNCP 61
PCQC+ + +C+ G+C C+ +G CE C GYYG P C PC CP
Sbjct: 866 PCQCN---GHADDCDPVTGECLNCQDYTMGHNCERCLAGYYGDPIIGSGDHCRPCPCP 920
Score = 35.8 bits (81), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 32/80 (40%), Gaps = 20/80 (25%)
Query: 12 CQCDIDGSKS---------FECEQFGGQCQCKPNVIGRRCEMCATGYYGFPDCHPCNC-- 60
C CD GS++ F GQC+CK NV G C++C G+Y P C
Sbjct: 398 CTCDPAGSQNEGICDSYTDFSTGLIAGQCRCKLNVEGEHCDVCKEGFYDLSSEDPFGCKS 457
Query: 61 ---------PFTAVCDSYTG 71
P CDS TG
Sbjct: 458 CACNPLGTIPGGNPCDSETG 477
Score = 32.3 bits (72), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 24/57 (42%), Gaps = 14/57 (24%)
Query: 28 GGQCQ-CKPNVIGRRCEMCATGYYGFPD-------------CHPCNCPFTAVCDSYT 70
GG C C+ N +GR CE C YY P+ C P +CDSYT
Sbjct: 359 GGVCDDCQHNTMGRNCEQCKPFYYQHPERDIRDPNFCERCTCDPAGSQNEGICDSYT 415
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 6/65 (9%)
Query: 11 PCQC--DIDGSKSFECEQFGGQC-QCKPNVIGRRCEMCATGYYGFP---DCHPCNCPFTA 64
PCQC +ID + C++ G+C +C + G C+ C GYYG DC C C +
Sbjct: 975 PCQCHNNIDTTDPEACDKETGRCLKCLYHTEGEHCQFCRFGYYGDALQQDCRKCVCNYLG 1034
Query: 65 VCDSY 69
+
Sbjct: 1035 TVQEH 1039
Score = 29.3 bits (64), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 21/43 (48%), Gaps = 4/43 (9%)
Query: 24 CEQFGGQCQCKPNVIGRRCEMCATGYYGFPD----CHPCNCPF 62
C+ G C CK V G+ C+ C ++G + C PC+C
Sbjct: 472 CDSETGHCYCKRLVTGQHCDQCLPEHWGLSNDLDGCRPCDCDL 514
>sp|P11046|LAMB1_DROME Laminin subunit beta-1 OS=Drosophila melanogaster GN=LanB1 PE=1
SV=4
Length = 1788
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 40/68 (58%), Gaps = 3/68 (4%)
Query: 5 FLHE-ALPCQCDIDGSKSFECEQFGGQCQCKPNVIGRRCEMCATGYYGF--PDCHPCNCP 61
F+H+ A C C+ GS S CE GG CQCKPNV+GR+C+ CA G YGF C C+C
Sbjct: 781 FVHDGASMCNCNPTGSLSKVCESNGGYCQCKPNVVGRQCDQCAPGTYGFGPEGCKACDCN 840
Query: 62 FTAVCDSY 69
D Y
Sbjct: 841 SIGSKDKY 848
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 12 CQCDIDGSKSFECEQFGGQCQCKPNVIGRRCEMCATGYYGFPDCHPCNCP-FTAVCDSYT 70
C C+ GSK C+ GQCQC PN GR C C GY+ FP+C C C A CD
Sbjct: 837 CDCNSIGSKDKYCDLITGQCQCVPNTYGRECNQCQPGYWNFPECRVCQCNGHAATCDPIQ 896
Query: 71 G 71
G
Sbjct: 897 G 897
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 34/66 (51%), Gaps = 6/66 (9%)
Query: 12 CQCDIDGSKSFECEQFGGQCQCKPNVIGRRCEMCATGYYGFPD--CHPCNCP-FTAV--- 65
C CD G+ +C + GQCQCKP GR C C Y+G P+ C PC C F A
Sbjct: 1094 CNCDPIGALHEQCNSYTGQCQCKPGFGGRACNQCQAHYWGNPNEKCQPCECDQFGAADFQ 1153
Query: 66 CDSYTG 71
CD TG
Sbjct: 1154 CDRETG 1159
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 40/70 (57%), Gaps = 9/70 (12%)
Query: 12 CQCDIDGSKS--FECEQFGGQCQCKPNVIGRRCEMCATGYYGFPD---CHPCNC-PFTAV 65
C+CD G+ + C++F GQC C PNV G RC+ CA ++ C CNC P A+
Sbjct: 1043 CECDFLGTNNTIAHCDRFTGQCPCLPNVQGVRCDQCAENHWKIASGEGCESCNCDPIGAL 1102
Query: 66 ---CDSYTGK 72
C+SYTG+
Sbjct: 1103 HEQCNSYTGQ 1112
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 44/88 (50%), Gaps = 10/88 (11%)
Query: 11 PCQCDIDGSKSFECEQFGGQCQCKPNVIGRRCEMCATGYYG-FPDCHPC-------NCPF 62
PC+CD G+ F+C++ G C C + G +C CA GY G FP C PC +
Sbjct: 1141 PCECDQFGAADFQCDRETGNCVCHEGIGGYKCNECARGYIGQFPHCSPCGECFNNWDLIL 1200
Query: 63 TAVCDSYTGKL--AQVLIQVVTFPNYPS 88
+A+ D+ T + A+ + QV Y S
Sbjct: 1201 SALEDATTATILRAKEIKQVGATGAYTS 1228
Score = 37.0 bits (84), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 24/64 (37%), Gaps = 14/64 (21%)
Query: 11 PCQCDIDGS---------KSFECEQFGGQCQCKPNVIGRRCEMCATGYYGFPD-----CH 56
PC CD GS E G C CK V GRRC C GY+ C
Sbjct: 417 PCDCDPQGSSDDGICDSLNELEEGAVAGACHCKAFVTGRRCNQCKDGYWNLQSDNPEGCE 476
Query: 57 PCNC 60
PC C
Sbjct: 477 PCTC 480
Score = 35.4 bits (80), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Query: 12 CQCDIDGSKSFECEQFGGQCQCKPNVIGRRCEMCATGYY--GFPDCH 56
C CD GS C+ GQC+C+P++ GR C Y+ P+ H
Sbjct: 529 CNCDAGGSYDNYCDVISGQCRCRPHMTGRSCSQPKQNYFIPLLPEVH 575
Score = 32.7 bits (73), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 26/61 (42%), Gaps = 10/61 (16%)
Query: 31 CQCKPNVIGRRCEMCATGYYGFPD----CHPCNCPF------TAVCDSYTGKLAQVLIQV 80
C C+ G RCE+CA ++G PD C C C T CD TG + L Q
Sbjct: 960 CHCQEGYSGSRCEICADNFFGNPDNGGTCSKCECSNNVDLYDTGNCDRQTGACLKCLYQT 1019
Query: 81 V 81
Sbjct: 1020 T 1020
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 5/64 (7%)
Query: 11 PCQCDIDGS-KSFECEQFGGQCQCKPNVIGRRCEMCATGYYGFPD----CHPCNCPFTAV 65
PC C+ G+ + C G+C+CK V G+ C C YG + C CNC
Sbjct: 477 PCTCNPLGTLNNSGCVMRTGECKCKKYVTGKDCNQCMPETYGLSESPEGCSLCNCDAGGS 536
Query: 66 CDSY 69
D+Y
Sbjct: 537 YDNY 540
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 10/71 (14%)
Query: 12 CQCDIDGSKSFECEQFGGQC-QCKPNVIGRRCEMCATGYYGFP---DCHPCNCPF----- 62
C ++D + C++ G C +C G CE+C G++G +C C C F
Sbjct: 993 CSNNVDLYDTGNCDRQTGACLKCLYQTTGDHCELCKDGFFGDALQQNCQQCECDFLGTNN 1052
Query: 63 -TAVCDSYTGK 72
A CD +TG+
Sbjct: 1053 TIAHCDRFTGQ 1063
>sp|Q8JHV6|LAMB4_DANRE Laminin subunit beta-4 OS=Danio rerio GN=lamb4 PE=2 SV=1
Length = 1827
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 46/76 (60%), Gaps = 7/76 (9%)
Query: 4 SFLHE-ALPCQCDIDGSKSFECEQFGGQCQCKPNVIGRRCEMCATGYYGF-PD-CHPCNC 60
+F+H A+ C C G+ C +FGGQCQCKPNVIGR C+ CA YG P+ C PC+C
Sbjct: 844 AFIHNGAVSCNCHHVGAYGSSCSKFGGQCQCKPNVIGRCCDSCAPLTYGLGPNGCSPCDC 903
Query: 61 ----PFTAVCDSYTGK 72
T +CD TG+
Sbjct: 904 DRSGSTTELCDQTTGQ 919
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 11 PCQCDIDGSKSFECEQFGGQCQCKPNVIGRRCEMCATGYYGFPDCHPCNCPFTA-VCDSY 69
PC CD GS + C+Q GQC C+ + G +C C GYYGFP C C C A +CD
Sbjct: 900 PCDCDRSGSTTELCDQTTGQCSCRDGITGLQCNRCYPGYYGFPLCRRCQCNRLADICDPI 959
Query: 70 TG 71
TG
Sbjct: 960 TG 961
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 37/75 (49%), Gaps = 12/75 (16%)
Query: 10 LPCQCDIDGS-KSFECEQFGGQCQCKPNVIGRRCEMCATGYYGFPD-----CHPCNCPFT 63
+PC CD+DGS C+ GQC CK N+ G RC+ C G+YGF C C C F
Sbjct: 395 IPCDCDLDGSVDRGLCDPVNGQCVCKQNIEGERCDRCKVGFYGFSRDDPSGCQLCRCNFL 454
Query: 64 AV------CDSYTGK 72
CD TG+
Sbjct: 455 GTIQVGNPCDPTTGR 469
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%)
Query: 10 LPCQCDIDGSKSFECEQFGGQCQCKPNVIGRRCEMCATGYYGFP 53
+PC CDI G+ EC GQC+C+PN++G++C A GY+ P
Sbjct: 499 IPCDCDIGGALKTECSSVDGQCKCRPNMVGQKCNDPAPGYFLAP 542
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 38/68 (55%), Gaps = 6/68 (8%)
Query: 11 PCQCDIDGSKSFECEQFGGQCQCKPNVIGRRCEMCATGYYGFPD--CHPCNCPFTA---- 64
PC C+ + + ++ C++ GQC C+P GR C+ C ++G PD C C+C
Sbjct: 1162 PCNCNREHALNYICDKITGQCLCQPEYGGRICDECGPNHFGNPDLQCMFCDCNLEGTVHP 1221
Query: 65 VCDSYTGK 72
CD+YTG+
Sbjct: 1222 ACDAYTGE 1229
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 34/76 (44%), Gaps = 15/76 (19%)
Query: 12 CQCDIDGSKSFEC--------EQFGGQCQCKPNVIGRRCEMCATGYY---GFPDCHPCNC 60
C CD G+ +C +Q GQC C+P V G C C GY+ G C PCNC
Sbjct: 1106 CSCDRRGTDDSKCPAGSPCFCDQDTGQCPCRPGVQGALCNECDDGYWNMDGDYGCQPCNC 1165
Query: 61 ----PFTAVCDSYTGK 72
+CD TG+
Sbjct: 1166 NREHALNYICDKITGQ 1181
Score = 34.3 bits (77), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 28/61 (45%), Gaps = 4/61 (6%)
Query: 12 CQCDIDGSKSFECEQFGGQC-QCKPNVIGRRCEMCATGYYG---FPDCHPCNCPFTAVCD 67
C +ID C+ G+C +C N G RC+ C GYYG DC C+C D
Sbjct: 1056 CNNNIDPRDGDACDPVTGECLRCLHNTEGPRCQSCKRGYYGNALAQDCKECSCDRRGTDD 1115
Query: 68 S 68
S
Sbjct: 1116 S 1116
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 21/43 (48%), Gaps = 5/43 (11%)
Query: 24 CEQFGGQC-QCKPNVIGRRCEMCATGYYGFP----DCHPCNCP 61
C+ G C C+ + GR CE C GY G P C PC CP
Sbjct: 956 CDPITGDCLDCREHSAGRNCERCEEGYVGDPVSGQPCEPCLCP 998
>sp|P25391|LAMA1_HUMAN Laminin subunit alpha-1 OS=Homo sapiens GN=LAMA1 PE=1 SV=2
Length = 3075
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 39/69 (56%), Gaps = 4/69 (5%)
Query: 7 HEALPCQCDIDGSKSFECEQFGGQCQCKPNVIGRRCEMCATGYYGFPD--CHPCNCPFTA 64
H PC C + GS S C GQC C P V G+RC+ CA G+Y + D C PC+CP T
Sbjct: 946 HGCRPCNCSVAGSVSDGCTD-EGQCHCVPGVAGKRCDRCAHGFYAYQDGSCTPCDCPHTQ 1004
Query: 65 -VCDSYTGK 72
CD TG+
Sbjct: 1005 NTCDPETGE 1013
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 28/54 (51%)
Query: 12 CQCDIDGSKSFECEQFGGQCQCKPNVIGRRCEMCATGYYGFPDCHPCNCPFTAV 65
C C + GS C+ G CQCK GR C+ C+ GY FPDC PC+C
Sbjct: 1044 CNCSLVGSTHHRCDVVTGHCQCKSKFGGRACDQCSLGYRDFPDCVPCDCDLRGT 1097
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 30/52 (57%), Gaps = 3/52 (5%)
Query: 12 CQCDIDGSKSFECEQFGGQCQCKPNVIGRRCEMCATGYYGFPD---CHPCNC 60
C+C + GS S C G C CKPNV G++C+ C GYYG C PCNC
Sbjct: 902 CECHVKGSHSAVCHLETGLCDCKPNVTGQQCDQCLHGYYGLDSGHGCRPCNC 953
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 30/66 (45%), Gaps = 9/66 (13%)
Query: 11 PCQCDIDGSKSFECEQFGGQCQCKPNVIGRRCEMCATGYYGFP------DCHPCNCPFTA 64
PC+C + EC G C N G CE C G+YG P DC PC CP T
Sbjct: 741 PCECH---GHAAECNVHGVCIACAHNTTGVHCEQCLPGFYGEPSRGTPGDCQPCACPLTI 797
Query: 65 VCDSYT 70
++++
Sbjct: 798 ASNNFS 803
Score = 38.1 bits (87), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 11/73 (15%)
Query: 10 LPCQC--DIDGSKSFECEQFGGQC-QCKPNVIGRRCEMCATGYYG----FPDCHPCNC-- 60
+PC C ++D S++ C+ G+C +C N G CE CA G+YG +C C C
Sbjct: 847 VPCDCSGNVDPSEAGHCDSVTGECLKCLGNTDGAHCERCADGFYGDAVTAKNCRACECHV 906
Query: 61 --PFTAVCDSYTG 71
+AVC TG
Sbjct: 907 KGSHSAVCHLETG 919
Score = 35.8 bits (81), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 29/69 (42%), Gaps = 12/69 (17%)
Query: 11 PCQCDIDGSKSFECEQFG-----------GQCQCKPNVIGRRCEMCATGYYGFPDCHPCN 59
PC CD GS S C + GQC CK G +C+ C GY +P C C
Sbjct: 396 PCNCDPVGSLSSVCIKDDLHSDLHNGKQPGQCPCKEGYTGEKCDRCQLGYKDYPTCVSCG 455
Query: 60 C-PFTAVCD 67
C P + D
Sbjct: 456 CNPVGSASD 464
Score = 33.5 bits (75), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 7/55 (12%)
Query: 24 CEQFGGQCQCKPNVIGRRCEMCATGYYGFP---DCHPCNCPFTAV----CDSYTG 71
C+ G+C C P+ G +CE C G++G+ C CNC CD TG
Sbjct: 1007 CDPETGECVCPPHTQGVKCEECEDGHWGYDAEVGCQACNCSLVGSTHHRCDVVTG 1061
Score = 33.1 bits (74), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 9/60 (15%)
Query: 10 LPCQCDIDGSKSFECEQFGGQC-QCKPNVIGRRCEMCATGYYG-----FPDCHPCNCPFT 63
+PC C+ + S C+ G+C C N G C++C +GYYG DC C CP +
Sbjct: 1401 VPCSCN---NHSDTCDPNTGKCLNCGDNTAGDHCDVCTSGYYGKVTGSASDCALCACPHS 1457
Score = 32.7 bits (73), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 35/74 (47%), Gaps = 10/74 (13%)
Query: 10 LPCQCDIDGSKSFE-CEQFGGQCQCKPNVIGRRCEMCATGYYGFPDCHPCNCP------F 62
+ C C+ GS S E C G C CK NV G+ C+ C G+Y + +P C
Sbjct: 452 VSCGCNPVGSASDEPCT---GPCVCKENVEGKACDRCKPGFYNLKEKNPRGCSECFCFGV 508
Query: 63 TAVCDSYTGKLAQV 76
+ VC S + + QV
Sbjct: 509 SDVCSSLSWPVGQV 522
Score = 32.3 bits (72), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 25/60 (41%), Gaps = 9/60 (15%)
Query: 10 LPCQCDIDGSKSFECE---------QFGGQCQCKPNVIGRRCEMCATGYYGFPDCHPCNC 60
+PC CD+ G+ C + G C CK NV G +C C G + +P C
Sbjct: 1088 VPCDCDLRGTSGDACNLEQGLCGCVEETGACPCKENVFGPQCNECREGTFALRADNPLGC 1147
Score = 32.3 bits (72), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 25/51 (49%), Gaps = 11/51 (21%)
Query: 33 CKPNVIGRRCEMCATGYYGFP-----DCHPCNC-----PFTA-VCDSYTGK 72
C P G CE CA GYYG P C PC+C P A CDS TG+
Sbjct: 819 CAPGYSGAWCERCADGYYGNPTVPGESCVPCDCSGNVDPSEAGHCDSVTGE 869
Score = 29.3 bits (64), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 19/34 (55%)
Query: 12 CQCDIDGSKSFECEQFGGQCQCKPNVIGRRCEMC 45
C C+ GS +C++ GQC C+ G RC+ C
Sbjct: 1509 CDCNPHGSVHGDCDRTSGQCVCRLGASGLRCDEC 1542
>sp|P24043|LAMA2_HUMAN Laminin subunit alpha-2 OS=Homo sapiens GN=LAMA2 PE=1 SV=4
Length = 3122
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 41/66 (62%), Gaps = 4/66 (6%)
Query: 10 LPCQCDIDGSKSFECEQFGGQCQCKPNVIGRRCEMCATGYYGFPD--CHPCNCPFTA-VC 66
+PC C+ GSKSF+CE+ GQC C+P V G++C+ CA GY+ F + C C C C
Sbjct: 965 VPCNCNSFGSKSFDCEE-SGQCWCQPGVTGKKCDRCAHGYFNFQEGGCTACECSHLGNNC 1023
Query: 67 DSYTGK 72
D TG+
Sbjct: 1024 DPKTGR 1029
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 39/73 (53%), Gaps = 11/73 (15%)
Query: 11 PCQCD--IDGSKSFECEQFGGQCQ-CKPNVIGRRCEMCATGYYG----FPDCHPCNC--- 60
PCQC+ +D S C+ G C CKP GR CE+CA GY+G +C PC C
Sbjct: 864 PCQCNDNLDFSIPGSCDSLSGSCLICKPGTTGRYCELCADGYFGDAVDAKNCQPCRCNAG 923
Query: 61 -PFTAVCDSYTGK 72
F+ VC S TG+
Sbjct: 924 GSFSEVCHSQTGQ 936
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 31/53 (58%), Gaps = 3/53 (5%)
Query: 11 PCQCDIDGSKSFECEQFGGQCQCKPNVIGRRCEMCATGYYGFPD---CHPCNC 60
PC+C+ GS S C GQC+C+ NV G+RC+ C G +G C PCNC
Sbjct: 917 PCRCNAGGSFSEVCHSQTGQCECRANVQGQRCDKCKAGTFGLQSARGCVPCNC 969
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 34/65 (52%), Gaps = 4/65 (6%)
Query: 12 CQCDIDGSKSFECEQFGGQCQCKPNVIGRRCEMCATGYYGFPDCHPCNC--PFT--AVCD 67
C C GS F+C GQC C P G +C C+ G++ +P C+ C+C P T CD
Sbjct: 1060 CNCSTVGSLDFQCNVNTGQCNCHPKFSGAKCTECSRGHWNYPRCNLCDCFLPGTDATTCD 1119
Query: 68 SYTGK 72
S T K
Sbjct: 1120 SETKK 1124
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 29/59 (49%), Gaps = 9/59 (15%)
Query: 11 PCQCDIDGS------KSFECEQFG---GQCQCKPNVIGRRCEMCATGYYGFPDCHPCNC 60
PC CD GS K + + G G C CK G C+ CA GY G+PDC CNC
Sbjct: 413 PCHCDPIGSLNEVCVKDEKHARRGLAPGSCHCKTGFGGVSCDRCARGYTGYPDCKACNC 471
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 10/67 (14%)
Query: 11 PCQCDIDGSKSFECEQFGGQC-QCKPNVIGRRCEMCATGYYGFP------DCHPCNCPFT 63
PCQC + C+ G+C CK + G C+ C G+YG P DC PC CP
Sbjct: 756 PCQC---FGHAESCDDVTGECLNCKDHTGGPYCDKCLPGFYGEPTKGTSEDCQPCACPLN 812
Query: 64 AVCDSYT 70
++++
Sbjct: 813 IPSNNFS 819
Score = 34.7 bits (78), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 34/67 (50%), Gaps = 9/67 (13%)
Query: 10 LPCQCDIDGSKSFECEQFGGQCQ-CKPNVIGRRCEMCATGYYGF-----PDCHPCNCPFT 63
+PCQC+ G S C+ CQ C+ + G CE CA GYYG DC C CP
Sbjct: 1418 VPCQCN--GHSSL-CDPETSICQNCQHHTAGDFCERCALGYYGIVKGLPNDCQQCACPLI 1474
Query: 64 AVCDSYT 70
+ ++++
Sbjct: 1475 SSSNNFS 1481
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Query: 5 FLHEALPCQCDIDGSKSFECEQFGGQCQCKPNVIGRRCEMCATGYYGFPDCHPCNC 60
FL CD + +K C GQC CK NV G C+ C G +G +P C
Sbjct: 1109 FLPGTDATTCDSE-TKKCSCSDQTGQCTCKVNVEGIHCDRCRPGKFGLDAKNPLGC 1163
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 19/34 (55%)
Query: 12 CQCDIDGSKSFECEQFGGQCQCKPNVIGRRCEMC 45
C+CD GS C+ G C C+P GR+C+ C
Sbjct: 1527 CECDPYGSLPVPCDPVTGFCTCRPGATGRKCDGC 1560
Score = 30.0 bits (66), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 20/44 (45%), Gaps = 11/44 (25%)
Query: 39 GRRCEMCATGYYGFP-----DCHPCNC------PFTAVCDSYTG 71
G RCE CA GY+G P C PC C CDS +G
Sbjct: 841 GPRCERCAEGYFGQPSVPGGSCQPCQCNDNLDFSIPGSCDSLSG 884
>sp|O75445|USH2A_HUMAN Usherin OS=Homo sapiens GN=USH2A PE=1 SV=3
Length = 5202
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 36/64 (56%), Gaps = 7/64 (10%)
Query: 11 PCQCDIDGSK--SFECEQFGGQCQCKPNVIGRRCEMCATGYYGF----PD-CHPCNCPFT 63
PC CD G++ S C+Q GGQC CK +V GR+C C G+Y PD C PCNC +
Sbjct: 640 PCDCDTVGTRNGSILCDQIGGQCNCKRHVSGRQCNQCQNGFYNLQELDPDGCSPCNCNTS 699
Query: 64 AVCD 67
D
Sbjct: 700 GTVD 703
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 36/69 (52%), Gaps = 7/69 (10%)
Query: 11 PCQCDIDGSKSFECEQFGGQCQCKPNVIGRRCEMCATGYYGF--PDCHPCNCPFTA---- 64
PCQC++ GS + C GQC+CK G +C+ C +YG +C C+C
Sbjct: 746 PCQCNLHGSVNKFCNPHSGQCECKKEAKGLQCDTCRENFYGLDVTNCKACDCDTAGSLPG 805
Query: 65 -VCDSYTGK 72
VC++ TG+
Sbjct: 806 TVCNAKTGQ 814
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 32/63 (50%), Gaps = 5/63 (7%)
Query: 10 LPCQCDIDGSKSFECEQFGGQCQCK-PNVIGRRCEMCATGYYGFP----DCHPCNCPFTA 64
LPC C G+ + C GQC C+ ++ G+RC+ C Y+GF C PCNC +
Sbjct: 949 LPCSCHTTGAVNHICNSLTGQCVCQDASIAGQRCDQCKDHYFGFDPQTGRCQPCNCHLSG 1008
Query: 65 VCD 67
+
Sbjct: 1009 ALN 1011
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 39/81 (48%), Gaps = 9/81 (11%)
Query: 1 MTISFLHEALPCQCDIDGS-KSFECEQFGGQCQCKPNVIGRRCEMCATGYYGFP----DC 55
+TI C+CD G+ C+ GQC C PN GRRC C G+Y P C
Sbjct: 889 LTIDNFQHCQMCECDSLGTLPGTICDPISGQCLCVPNRQGRRCNQCQPGFYISPGNATGC 948
Query: 56 HPCNCPFTA----VCDSYTGK 72
PC+C T +C+S TG+
Sbjct: 949 LPCSCHTTGAVNHICNSLTGQ 969
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 32/66 (48%), Gaps = 7/66 (10%)
Query: 11 PCQCDIDGS--KSFECEQFGGQCQCKPNVIGRRCEMCATGY---YGFPD--CHPCNCPFT 63
PC C+ G+ C Q GQC+CK NVIG RC+ C G+ F D C PC C
Sbjct: 693 PCNCNTSGTVDGDITCHQNSGQCKCKANVIGLRCDHCNFGFKFLRSFNDVGCEPCQCNLH 752
Query: 64 AVCDSY 69
+ +
Sbjct: 753 GSVNKF 758
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 33/73 (45%), Gaps = 12/73 (16%)
Query: 12 CQCDIDGS-KSFECEQFGGQCQCKPNVIGRRCEMCATGYYGFPD-----CHPCNCPFTA- 64
C CD GS C GQC CKPNV GR+C C G + C PCNC T
Sbjct: 795 CDCDTAGSLPGTVCNAKTGQCICKPNVEGRQCNKCLEGNFYLRQNNSFLCLPCNCDKTGT 854
Query: 65 -----VCDSYTGK 72
+C+ TG+
Sbjct: 855 INGSLLCNKSTGQ 867
Score = 35.4 bits (80), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 33/76 (43%), Gaps = 14/76 (18%)
Query: 10 LPCQCDIDGS--KSFECEQFGGQCQCKPNVIGRRCEMCATGYY-----GFPDCHPCNC-- 60
LPC CD G+ S C + GQC CK V G RC C Y F C C C
Sbjct: 845 LPCNCDKTGTINGSLLCNKSTGQCPCKLGVTGLRCNQCEPHRYNLTIDNFQHCQMCECDS 904
Query: 61 ----PFTAVCDSYTGK 72
P T +CD +G+
Sbjct: 905 LGTLPGT-ICDPISGQ 919
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 19/36 (52%)
Query: 11 PCQCDIDGSKSFECEQFGGQCQCKPNVIGRRCEMCA 46
PC C + G+ + C GQC CK V G +C+ C
Sbjct: 1001 PCNCHLSGALNETCHLVTGQCFCKQFVTGSKCDACV 1036
>sp|Q60675|LAMA2_MOUSE Laminin subunit alpha-2 OS=Mus musculus GN=Lama2 PE=1 SV=1
Length = 3106
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 41/66 (62%), Gaps = 4/66 (6%)
Query: 10 LPCQCDIDGSKSFECEQFGGQCQCKPNVIGRRCEMCATGYYGFPD--CHPCNCPFTA-VC 66
LPC C+ GSKSF+CE GQC C+P V G++C+ CA GY+ F + C C+C C
Sbjct: 961 LPCNCNSFGSKSFDCEA-SGQCWCQPGVAGKKCDRCAHGYFNFQEGGCIACDCSHLGNNC 1019
Query: 67 DSYTGK 72
D TG+
Sbjct: 1020 DPKTGQ 1025
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 33/53 (62%), Gaps = 3/53 (5%)
Query: 11 PCQCDIDGSKSFECEQFGGQCQCKPNVIGRRCEMCATGYYGFP---DCHPCNC 60
PC+CDI+GS S +C GQC+C+PNV GR C+ C +G C PCNC
Sbjct: 913 PCRCDINGSFSEDCHTRTGQCECRPNVQGRHCDECKPETFGLQLGRGCLPCNC 965
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 31/59 (52%), Gaps = 9/59 (15%)
Query: 11 PCQCDIDGSKSFEC---EQFG------GQCQCKPNVIGRRCEMCATGYYGFPDCHPCNC 60
PC CD GS S C E++ G C CK G C+ C GY+G+PDC PCNC
Sbjct: 409 PCHCDPTGSLSEVCVKDEKYAQRGLKPGSCHCKTGFGGVNCDRCVRGYHGYPDCQPCNC 467
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 38/73 (52%), Gaps = 11/73 (15%)
Query: 11 PCQCD--IDGSKSFECEQFGGQCQ-CKPNVIGRRCEMCATGYYG----FPDCHPCNC--- 60
PCQC+ +D S C+ G C CKP GR CE+CA GY+G +C PC C
Sbjct: 860 PCQCNDNLDYSIPGSCDSLSGSCLICKPGTTGRYCELCADGYFGDAVNTKNCQPCRCDIN 919
Query: 61 -PFTAVCDSYTGK 72
F+ C + TG+
Sbjct: 920 GSFSEDCHTRTGQ 932
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 26/49 (53%)
Query: 12 CQCDIDGSKSFECEQFGGQCQCKPNVIGRRCEMCATGYYGFPDCHPCNC 60
C C GS + +C GQC C P G +C C+ G++ +P C C+C
Sbjct: 1056 CNCSTVGSLASQCNVNTGQCSCHPKFSGMKCSECSRGHWNYPLCTLCDC 1104
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 9/67 (13%)
Query: 10 LPCQCDIDGSKSFECEQFGGQCQ-CKPNVIGRRCEMCATGYYGF-----PDCHPCNCPFT 63
+PCQC+ S +C+ CQ C+ + G CE CA GYYG DC PC CP
Sbjct: 1414 VPCQCN---GHSSQCDPETSVCQNCQHHTAGDFCERCALGYYGIVRGLPNDCQPCACPLI 1470
Query: 64 AVCDSYT 70
+ ++++
Sbjct: 1471 SPSNNFS 1477
Score = 34.3 bits (77), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 10/67 (14%)
Query: 11 PCQCDIDGSKSFECEQFGGQC-QCKPNVIGRRCEMCATGYYGFP------DCHPCNCPFT 63
PCQC + + C+ G+C CK + G C C G+YG P DC PC CP
Sbjct: 752 PCQC---FAHAEACDDITGECLNCKDHTGGPYCNECLPGFYGDPTRGSPEDCQPCACPLN 808
Query: 64 AVCDSYT 70
++++
Sbjct: 809 IPSNNFS 815
Score = 33.1 bits (74), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Query: 5 FLHEALPCQCDIDGSKSFECEQFGGQCQCKPNVIGRRCEMCATGYYGFPDCHPCNC 60
FL CD++ ++ C GQC CK NV G C+ C G +G +P C
Sbjct: 1105 FLPGTDATTCDLE-TRKCSCSDQTGQCSCKVNVEGVHCDRCRPGKFGLDAKNPLGC 1159
Score = 33.1 bits (74), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 20/34 (58%)
Query: 12 CQCDIDGSKSFECEQFGGQCQCKPNVIGRRCEMC 45
C+CD GS C++ G C C+P GR+C+ C
Sbjct: 1523 CECDPYGSLPVPCDRVTGLCTCRPGATGRKCDGC 1556
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 28/69 (40%), Gaps = 17/69 (24%)
Query: 14 CDIDGSKSFECEQFGGQCQCKPNVIGRRCEMCATGYYGFP-----DCHPCNC------PF 62
C +D S C++ C G RCE CA GY+G P C PC C
Sbjct: 818 CHLDRSLGLICDE------CPIGYTGPRCERCAEGYFGQPSVPGGSCQPCQCNDNLDYSI 871
Query: 63 TAVCDSYTG 71
CDS +G
Sbjct: 872 PGSCDSLSG 880
>sp|P19137|LAMA1_MOUSE Laminin subunit alpha-1 OS=Mus musculus GN=Lama1 PE=1 SV=1
Length = 3084
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 40/66 (60%), Gaps = 4/66 (6%)
Query: 10 LPCQCDIDGSKSFECEQFGGQCQCKPNVIGRRCEMCATGYYGFPD--CHPCNCPFTA-VC 66
+PC C ++GS S C + G QC C P V G++C+ C+ G+Y F D C PC+C T C
Sbjct: 956 VPCNCSVEGSVSDNCTEEG-QCHCGPGVSGKQCDRCSHGFYAFQDGGCTPCDCAHTQNNC 1014
Query: 67 DSYTGK 72
D +G+
Sbjct: 1015 DPASGE 1020
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 26/54 (48%)
Query: 12 CQCDIDGSKSFECEQFGGQCQCKPNVIGRRCEMCATGYYGFPDCHPCNCPFTAV 65
C C GS S +C+ G C CK G+ C C+ GY FPDC PC C
Sbjct: 1051 CNCSAVGSTSAQCDVLSGHCPCKKGFGGQSCHQCSLGYRSFPDCVPCGCDLRGT 1104
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 30/52 (57%), Gaps = 3/52 (5%)
Query: 12 CQCDIDGSKSFECEQFGGQCQCKPNVIGRRCEMCATGYYGFPD---CHPCNC 60
C C +GS S C G C CKP+V G++C+ C +GYYG C PCNC
Sbjct: 909 CDCHENGSLSGVCHLETGLCDCKPHVTGQQCDQCLSGYYGLDTGLGCVPCNC 960
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 32/65 (49%), Gaps = 11/65 (16%)
Query: 7 HEALPCQCDIDGSKSFEC-----------EQFGGQCQCKPNVIGRRCEMCATGYYGFPDC 55
H PC CD GS S C ++ GQC C+ G +C+ C GY GFP+C
Sbjct: 399 HPCRPCNCDPVGSLSSVCIKDDRHADLANGKWPGQCPCRKGYAGDKCDRCQFGYRGFPNC 458
Query: 56 HPCNC 60
PC+C
Sbjct: 459 IPCDC 463
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 33/58 (56%), Gaps = 9/58 (15%)
Query: 10 LPCQCDIDGSKSFECEQFGGQC-QCKPNVIGRRCEMCATGYY----GFP-DCHPCNCP 61
+PC C+ + S C+ G+C C+ + G CE+CA+GYY G P DC PC CP
Sbjct: 1408 VPCNCN---NHSDVCDPETGKCLSCRDHTSGDHCELCASGYYGKVTGLPGDCTPCTCP 1462
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 31/66 (46%), Gaps = 9/66 (13%)
Query: 11 PCQCDIDGSKSFECEQFGGQCQCKPNVIGRRCEMCATGYYGFP------DCHPCNCPFTA 64
PC+C S EC+ G C N G CE C G+YG P DC PC CP +
Sbjct: 748 PCECHGHAS---ECDIHGICSVCTHNTTGDHCEQCLPGFYGTPSRGTPGDCQPCACPLSI 804
Query: 65 VCDSYT 70
++++
Sbjct: 805 DSNNFS 810
Score = 37.4 bits (85), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 6/52 (11%)
Query: 31 CQCKPNVIGRRCEMCATGYYGFPDCHPCNCP------FTAVCDSYTGKLAQV 76
C CK NV G+ C+ C G+Y + +P C + VCDS T ++QV
Sbjct: 478 CLCKKNVEGKNCDRCKPGFYNLKERNPEGCSECFCFGVSGVCDSLTWSISQV 529
Score = 37.0 bits (84), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 26/52 (50%), Gaps = 11/52 (21%)
Query: 32 QCKPNVIGRRCEMCATGYYGFP-----DCHPCNC-----PFTA-VCDSYTGK 72
QC P G CE CA GYYG P C PCNC P A CDS TG+
Sbjct: 825 QCAPGYSGSWCERCADGYYGNPTVPGGTCVPCNCSGNVDPLEAGHCDSVTGE 876
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 36/73 (49%), Gaps = 11/73 (15%)
Query: 10 LPCQC--DIDGSKSFECEQFGGQC-QCKPNVIGRRCEMCATGYYG----FPDCHPCNC-- 60
+PC C ++D ++ C+ G+C +C N G CE CA G+YG +C C+C
Sbjct: 854 VPCNCSGNVDPLEAGHCDSVTGECLKCLWNTDGAHCERCADGFYGDAVTAKNCRACDCHE 913
Query: 61 --PFTAVCDSYTG 71
+ VC TG
Sbjct: 914 NGSLSGVCHLETG 926
Score = 33.9 bits (76), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 19/34 (55%)
Query: 12 CQCDIDGSKSFECEQFGGQCQCKPNVIGRRCEMC 45
C C+ GS +C++ GQC CKP G CE C
Sbjct: 1516 CDCNPQGSVHSDCDRASGQCVCKPGATGLHCEKC 1549
Score = 33.5 bits (75), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 27/60 (45%), Gaps = 9/60 (15%)
Query: 10 LPCQCDIDGSKSFECE---------QFGGQCQCKPNVIGRRCEMCATGYYGFPDCHPCNC 60
+PC CD+ G+ C+ + G C CK NV+G +C C G + +P C
Sbjct: 1095 VPCGCDLRGTLPDTCDLEQGLCSCSEDSGTCSCKENVVGPQCSKCQAGTFALRGDNPQGC 1154
Score = 33.1 bits (74), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 29/68 (42%), Gaps = 10/68 (14%)
Query: 11 PCQCDIDGSKSFECEQFGGQCQCKPNVIGRRCEMCATGYYGFP---DCHPCNCPF----T 63
PC C C+ G+C C P+ G +CE C Y+G C CNC +
Sbjct: 1004 PCDC---AHTQNNCDPASGECLCPPHTQGLKCEECEEAYWGLDPEQGCQACNCSAVGSTS 1060
Query: 64 AVCDSYTG 71
A CD +G
Sbjct: 1061 AQCDVLSG 1068
Score = 30.4 bits (67), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 25/57 (43%), Gaps = 15/57 (26%)
Query: 31 CQCKPNVIGRRCEMCATGYY--GFPD------------CHPCNC-PFTAVCDSYTGK 72
C C P G C+ CA GYY P+ C PCNC + VCD TGK
Sbjct: 1369 CVCPPGTAGHSCQDCAPGYYREKLPESGGRGPRPLLAPCVPCNCNNHSDVCDPETGK 1425
Score = 30.0 bits (66), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 15/68 (22%)
Query: 14 CDIDGSKSFECEQFGGQCQCKPNVIGRRCEMCATGYYGFP-----DCHPCNC-PFTAV-- 65
C ++G F C C P G+ CE C+ GY+G P C C+C P +V
Sbjct: 1473 CVVEGDSDFRCNA------CLPGYEGQYCERCSAGYHGNPRAAGGSCQTCDCNPQGSVHS 1526
Query: 66 -CDSYTGK 72
CD +G+
Sbjct: 1527 DCDRASGQ 1534
>sp|Q61789|LAMA3_MOUSE Laminin subunit alpha-3 OS=Mus musculus GN=Lama3 PE=1 SV=3
Length = 3333
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Query: 3 ISFLHEALPCQCDIDGSKSFECEQFGGQCQCKPNVIGRRCEMCATGYYGFPDC 55
+ LH +PC CD + ++ +C+Q G C CKPN G CE CA GYY FP C
Sbjct: 414 VDALHGCIPCSCDPE--RADDCDQGSGHCHCKPNFSGDYCETCADGYYNFPFC 464
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Query: 3 ISFLHE-ALPCQCDIDGSKSFE-CEQFGGQCQCKPNVIGRRCEMCATGYYGFPDCHPCNC 60
++F H A+PC+CD G+ C GG P G GYYGFP C PCNC
Sbjct: 1253 VAFYHNGAIPCECDPAGTAGHHHCSPEGGSALAGPMSSGASAAAVRQGYYGFPYCKPCNC 1312
Query: 61 PFTAVCDSYTGK 72
+C+ TGK
Sbjct: 1313 G-RRLCEEVTGK 1323
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 25/45 (55%)
Query: 12 CQCDIDGSKSFECEQFGGQCQCKPNVIGRRCEMCATGYYGFPDCH 56
CQC GS C+ GQC C P + GR+C+ C +G Y FP C
Sbjct: 533 CQCSTIGSYPVPCDPGNGQCDCLPGITGRQCDRCLSGAYDFPYCQ 577
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 32/54 (59%), Gaps = 5/54 (9%)
Query: 23 ECEQFGGQCQCKPNVIGRRCEMCATGYYGFP-DCHPCNCPFT----AVCDSYTG 71
EC++ GQC+CKP V G++C+ CA G P C PC+C +VCD TG
Sbjct: 1368 ECDRDSGQCRCKPRVTGQQCDKCAPGLLPVPLKCVPCSCNRDGTEPSVCDPETG 1421
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Query: 12 CQCDIDGSKSFECEQFGGQCQCKPNVIGRRCEMCATGYYGFPDCH 56
CQCDI G+ + C G CQC+ +V G++C+ YY FPD H
Sbjct: 681 CQCDIGGALTTMCSGPSGVCQCREHVEGKQCQRPENNYY-FPDLH 724
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 12 CQCDIDGSKSFECEQFGGQCQCKPNVIGRRCEMCATGYYGFPDCHPCNC 60
C C+++G C+ G +C C+P V G +C+ C +G Y FP C C C
Sbjct: 488 CDCNLEGVLPEICDDRG-RCLCRPGVEGPQCDSCRSGSYSFPICQACQC 535
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 25/50 (50%), Gaps = 8/50 (16%)
Query: 30 QCQCKPNVIGRRCEMCATGYYGFP-----DCHPCNCPFTAV---CDSYTG 71
+C CKP G +CE CA GY+G P C PCNC CD TG
Sbjct: 1754 RCACKPGYTGTQCERCAPGYFGNPQKFGGSCQPCNCNSNGQLGPCDPLTG 1803
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 28/51 (54%)
Query: 10 LPCQCDIDGSKSFECEQFGGQCQCKPNVIGRRCEMCATGYYGFPDCHPCNC 60
+PC C+ DG++ C+ G C CK NV G +C++C G + +P C
Sbjct: 1402 VPCSCNRDGTEPSVCDPETGACMCKENVEGPQCQLCREGSFYLDPTNPKGC 1452
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 26/58 (44%), Gaps = 7/58 (12%)
Query: 10 LPCQCDIDGSKSFECEQFGGQC-QCKPNVIGRRCEMCATGYYG---FPDCHPCNCPFT 63
+PC C+ S C+ G C C+ N G CE C G+YG C C CP T
Sbjct: 1685 VPCNCN---GHSNRCQDGSGICINCQHNTAGEHCERCQAGHYGNAIHGSCRVCPCPHT 1739
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Query: 12 CQCDIDGSKSF--ECEQFGGQCQCKPNVIGRRCEMCATGYYGF 52
CQC G+ S EC Q G C CK +V G C+ C G++
Sbjct: 628 CQCHEAGTLSGIGECGQEDGDCSCKAHVTGDACDTCEDGFFSL 670
Score = 28.9 bits (63), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 23/48 (47%), Gaps = 3/48 (6%)
Query: 24 CEQFGGQCQCKPNVIGRRCEMCATGYYGF---PDCHPCNCPFTAVCDS 68
CE+ G+C C P+ + +CE+C + F C CNC ++
Sbjct: 1317 CEEVTGKCLCPPHTVRPQCEVCEMNSFNFHPVAGCDVCNCSRKGTIEA 1364
>sp|Q18823|LAM2_CAEEL Laminin-like protein lam-2 OS=Caenorhabditis elegans GN=lam-2 PE=1
SV=3
Length = 1633
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 38/67 (56%), Gaps = 6/67 (8%)
Query: 12 CQCDIDGSKSFECEQFGGQCQCKPNVIGRRCEMCATGYYGFP--DCHPCNCPFTAV---- 65
C CD GS+ C+ GQCQCKP V G+RC+ CA ++GF C PC+C +
Sbjct: 946 CNCDPLGSEGNTCDVNTGQCQCKPGVTGQRCDRCADYHFGFSANGCQPCDCEYIGSENQQ 1005
Query: 66 CDSYTGK 72
CD +G+
Sbjct: 1006 CDVNSGQ 1012
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Query: 11 PCQCDIDGSKSFECEQFGGQCQCKPNVIGRRCEMCATGYYGFPD-CHPCNCPFTAV 65
PC C+ GS++ +C+ GQC CK NV GRRC+ CA YG C PC+ +T +
Sbjct: 993 PCDCEYIGSENQQCDVNSGQCLCKENVEGRRCDQCAENRYGITQGCLPCDDCYTLI 1048
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 31/58 (53%), Gaps = 7/58 (12%)
Query: 22 FECEQFGGQCQCKPNVIGRRCEMCATGYYGFPD---CHPCNC-PFTA---VCDSYTGK 72
EC Q GQC C PNVIG +C+ CA G+Y C CNC P + CD TG+
Sbjct: 907 LECNQQDGQCDCLPNVIGIQCDQCAHGFYNITSGLGCQECNCDPLGSEGNTCDVNTGQ 964
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
Query: 10 LPCQCDIDGSKSFECEQFGGQCQCKPNVIGRRCEMCATGYYGFPD--CHPCNCPFTA 64
+ C C+ GS S +C+ G+CQCKP V GR C+ C G+Y F C C C +
Sbjct: 401 VACGCNEIGSLSTQCDN-EGKCQCKPGVTGRFCDQCLDGFYDFSTNGCKNCGCETSG 456
Score = 38.1 bits (87), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 23/52 (44%), Gaps = 6/52 (11%)
Query: 21 SFECEQFGGQCQCKPNVIGRRCEMCATGYYG------FPDCHPCNCPFTAVC 66
S CE G C C+ N G CE CA GYYG DC C CP C
Sbjct: 742 SNSCEAESGSCICEHNTAGDTCERCARGYYGDALQGTEEDCQKCPCPNDGPC 793
>sp|P15215|LAMC1_DROME Laminin subunit gamma-1 OS=Drosophila melanogaster GN=LanB2 PE=2 SV=2
Length = 1639
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 40/81 (49%), Gaps = 8/81 (9%)
Query: 11 PCQCDIDGSKSFECEQFGGQCQCKPNVIGRRCEMCATGYY----GFPDCHPCNCPFTAVC 66
PC+CD GSK F+C+Q GQC C NV GRRC+ C Y G DC C
Sbjct: 1003 PCECDESGSKGFQCDQ-NGQCPCNDNVEGRRCDRCKENKYDRHRGCIDCPDCYNLVQDAA 1061
Query: 67 DSYTGK---LAQVLIQVVTFP 84
D + K L+Q L ++ P
Sbjct: 1062 DLHRAKLFNLSQTLDEIARTP 1082
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 32/51 (62%), Gaps = 2/51 (3%)
Query: 12 CQCDIDGSKSFECEQFGGQCQCKPNVIGRRCEMCATGYYGFPD--CHPCNC 60
C CD GS + C+++ GQC C+P V+G+RC+ C +YGF C PC C
Sbjct: 956 CLCDPVGSYNSTCDRYSGQCHCRPGVMGQRCDQCENYFYGFSSEGCKPCEC 1006
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 32/56 (57%), Gaps = 7/56 (12%)
Query: 24 CEQFGGQCQCKPNVIGRRCEMCATGYYGFPDCHPC-NC------PFTAVCDSYTGK 72
C+Q GQCQCKPNVIGR C C GY+ + C NC + + CD Y+G+
Sbjct: 919 CDQVTGQCQCKPNVIGRDCGECQPGYFNIRSGNGCENCLCDPVGSYNSTCDRYSGQ 974
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 35/70 (50%), Gaps = 9/70 (12%)
Query: 10 LPCQCDIDGSKSFECEQFGGQCQCKPNVIGRRCEMCATGYYGF--PDCHPCNCPF----- 62
+ C CD GS+S +C G +CQCKP V G +C+ C YY F C C C
Sbjct: 412 VNCACDPVGSRSLQCNSHG-KCQCKPGVTGDKCDRCDNNYYQFGPHGCQQCGCDSGGSHQ 470
Query: 63 -TAVCDSYTG 71
T CD+ TG
Sbjct: 471 NTPACDTETG 480
Score = 34.3 bits (77), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 29/64 (45%), Gaps = 8/64 (12%)
Query: 10 LPC-QCDIDGSKSFECEQFGGQCQCKPNVIGRRCEMCATGYYGFP------DCHPCNCPF 62
+PC CD G C+ G+C C+ N G C+ CA G+YG DC C CP
Sbjct: 739 MPCIPCDCHGHADI-CDSETGRCICQHNTHGDNCDQCAKGFYGNALGGTPNDCKRCPCPN 797
Query: 63 TAVC 66
C
Sbjct: 798 DGAC 801
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 26/51 (50%), Gaps = 8/51 (15%)
Query: 30 QCQCKPNVIGRRCEMCATGYYGFPD-------CHPCNCPFTA-VCDSYTGK 72
QC C +G+ CE CA GY P C PC+C A +CDS TG+
Sbjct: 709 QCTCPEGYLGQFCESCAPGYRHSPARGGPFMPCIPCDCHGHADICDSETGR 759
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 26/56 (46%), Gaps = 7/56 (12%)
Query: 12 CQCDIDGS--KSFECEQFGGQCQCKPNVIGRRCEMCATGYYGFPD-----CHPCNC 60
C CD GS + C+ G C CK NV GRRC C G++ C PC C
Sbjct: 461 CGCDSGGSHQNTPACDTETGICFCKENVEGRRCNECKPGFFNLDKNNRFGCTPCFC 516
>sp|P97927|LAMA4_MOUSE Laminin subunit alpha-4 OS=Mus musculus GN=Lama4 PE=1 SV=2
Length = 1816
Score = 50.1 bits (118), Expect = 4e-06, Method: Composition-based stats.
Identities = 31/80 (38%), Positives = 41/80 (51%), Gaps = 11/80 (13%)
Query: 13 QCDIDGSKS----FE-CEQFGGQCQ-CKPNVIGRRCEMCATGYYG----FPDCHPCNCPF 62
+CD G+ FE C++ GQC+ C N G +CE CA GYYG +C CNC
Sbjct: 186 KCDCSGNSDPNLIFEDCDEITGQCRNCLRNTTGFKCERCAPGYYGDARTAKNCAVCNCG- 244
Query: 63 TAVCDSYTGKLAQVLIQVVT 82
CDS TG+ + +V T
Sbjct: 245 GGPCDSVTGECLEEGFEVPT 264
Score = 47.0 bits (110), Expect = 4e-05, Method: Composition-based stats.
Identities = 29/89 (32%), Positives = 37/89 (41%), Gaps = 16/89 (17%)
Query: 11 PCQCDIDGSKSF--ECEQFGG--QCQCKPNVIGRRCEMCATGYYGFP-----DCHPCNCP 61
PC C + +F C + G +C CK N +G CE CA GYYG P C C+C
Sbjct: 131 PCPCPLPHLANFAESCYRKNGAVRCICKENYVGPNCERCAPGYYGNPLLIGSTCKKCDCS 190
Query: 62 FTA-------VCDSYTGKLAQVLIQVVTF 83
+ CD TG+ L F
Sbjct: 191 GNSDPNLIFEDCDEITGQCRNCLRNTTGF 219
Score = 44.7 bits (104), Expect = 2e-04, Method: Composition-based stats.
Identities = 31/99 (31%), Positives = 36/99 (36%), Gaps = 16/99 (16%)
Query: 8 EALPCQCDIDGSKSFECEQFGGQC-QCKPNVIGRRCEMCATGYY-----GFPD-CHPCNC 60
E PC C+ S EC G C C+ N G CE C GY G P C PC C
Sbjct: 78 ECAPCDCN---GNSHECLDGSGFCLHCQRNTTGEHCEKCLDGYIGDSIRGTPRFCQPCPC 134
Query: 61 P------FTAVCDSYTGKLAQVLIQVVTFPNYPSCKLWY 93
P F C G + + + PN C Y
Sbjct: 135 PLPHLANFAESCYRKNGAVRCICKENYVGPNCERCAPGY 173
>sp|Q9HB63|NET4_HUMAN Netrin-4 OS=Homo sapiens GN=NTN4 PE=2 SV=2
Length = 628
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 40/92 (43%), Gaps = 10/92 (10%)
Query: 11 PCQCDIDGSKSFE------CEQFGGQCQCKPNVIGRRCEMCATGYYGFPD--CHPCNCPF 62
PC C GS C+ G C CKP V GRRC+ C GY+GF D C PC+C
Sbjct: 394 PCSCHPVGSAVLPANSVTFCDPSNGDCPCKPGVAGRRCDRCMVGYWGFGDYGCRPCDC-- 451
Query: 63 TAVCDSYTGKLAQVLIQVVTFPNYPSCKLWYN 94
CD TG + + P + +N
Sbjct: 452 AGSCDPITGDCISSHTDIDWYHEVPDFRPVHN 483
>sp|Q16363|LAMA4_HUMAN Laminin subunit alpha-4 OS=Homo sapiens GN=LAMA4 PE=1 SV=4
Length = 1823
Score = 49.7 bits (117), Expect = 5e-06, Method: Composition-based stats.
Identities = 29/70 (41%), Positives = 37/70 (52%), Gaps = 11/70 (15%)
Query: 13 QCDIDGSKS----FE-CEQFGGQCQ-CKPNVIGRRCEMCATGYYG----FPDCHPCNCPF 62
+CD G+ FE C++ GQC+ C N G +CE CA GYYG +C CNC
Sbjct: 186 KCDCSGNSDPNLIFEDCDEVTGQCRNCLRNTTGFKCERCAPGYYGDARIAKNCAVCNCG- 244
Query: 63 TAVCDSYTGK 72
CDS TG+
Sbjct: 245 GGPCDSVTGE 254
Score = 46.2 bits (108), Expect = 7e-05, Method: Composition-based stats.
Identities = 33/106 (31%), Positives = 39/106 (36%), Gaps = 20/106 (18%)
Query: 5 FLH----EALPCQCDIDGSKSFECEQFGGQC-QCKPNVIGRRCEMCATGYY-----GFPD 54
F H E +PC C+ S EC G C C+ N G CE C GY G P
Sbjct: 71 FFHTLSGECVPCDCN---GNSNECLDGSGYCVHCQRNTTGEHCEKCLDGYIGDSIRGAPQ 127
Query: 55 -CHPCNCP------FTAVCDSYTGKLAQVLIQVVTFPNYPSCKLWY 93
C PC CP F C G + + + PN C Y
Sbjct: 128 FCQPCPCPLPHLANFAESCYRKNGAVRCICNENYAGPNCERCAPGY 173
Score = 43.5 bits (101), Expect = 4e-04, Method: Composition-based stats.
Identities = 28/89 (31%), Positives = 35/89 (39%), Gaps = 16/89 (17%)
Query: 11 PCQCDIDGSKSF--ECEQFGG--QCQCKPNVIGRRCEMCATGYYGFP-----DCHPCNCP 61
PC C + +F C + G +C C N G CE CA GYYG P C C+C
Sbjct: 131 PCPCPLPHLANFAESCYRKNGAVRCICNENYAGPNCERCAPGYYGNPLLIGSTCKKCDCS 190
Query: 62 FTA-------VCDSYTGKLAQVLIQVVTF 83
+ CD TG+ L F
Sbjct: 191 GNSDPNLIFEDCDEVTGQCRNCLRNTTGF 219
>sp|Q8K3K1|USH2A_RAT Usherin OS=Rattus norvegicus GN=Ush2a PE=1 SV=1
Length = 1512
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 35/69 (50%), Gaps = 7/69 (10%)
Query: 11 PCQCDIDGSKSFECEQFGGQCQCKPNVIGRRCEMCATGYYGFP-------DCHPCNCPFT 63
PC C++ GS + C+ GQC CK G RC++C +YG P DC+
Sbjct: 742 PCHCNLHGSVNQLCDPLSGQCVCKKEAKGLRCDVCRENFYGLPWSACEVCDCNRAGTQAG 801
Query: 64 AVCDSYTGK 72
VCD+ TG+
Sbjct: 802 TVCDAETGQ 810
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 34/63 (53%), Gaps = 7/63 (11%)
Query: 12 CQCDIDGSK--SFECEQFGGQCQCKPNVIGRRCEMCATGYYGF----PD-CHPCNCPFTA 64
C C+ DG++ S C+ G QC CK V GRRC C G+YG PD C PC+C +
Sbjct: 637 CDCNRDGTRNGSLLCDLVGDQCDCKRRVSGRRCFRCHIGFYGLQALDPDCCRPCDCNPSG 696
Query: 65 VCD 67
D
Sbjct: 697 TVD 699
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 37/73 (50%), Gaps = 12/73 (16%)
Query: 12 CQCDIDGSKSFE-CEQFGGQCQCKPNVIGRRCEMCATGYYGFPD-----CHPCNCPFTA- 64
C C+ G+++ C+ GQC CKP+V GRRC C GY+ C PCNC T
Sbjct: 791 CDCNRAGTQAGTVCDAETGQCVCKPSVGGRRCSECKEGYFNLRQNDSHLCLPCNCEKTGT 850
Query: 65 -----VCDSYTGK 72
+CD TG+
Sbjct: 851 VNGSLLCDKSTGQ 863
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 34/73 (46%), Gaps = 11/73 (15%)
Query: 11 PCQCDIDGS--KSFECEQFGGQCQCKPNVIGRRCEMCATGY-----YGFPDCHPCNCPF- 62
PC C+ G+ C GQC CK NVIG RC+ C+ G+ C PC+C
Sbjct: 689 PCDCNPSGTVDGDITCHHNSGQCSCKANVIGLRCDRCSFGFKFLRSLNADGCEPCHCNLH 748
Query: 63 ---TAVCDSYTGK 72
+CD +G+
Sbjct: 749 GSVNQLCDPLSGQ 761
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 21/38 (55%)
Query: 11 PCQCDIDGSKSFECEQFGGQCQCKPNVIGRRCEMCATG 48
PC C + G+ + C+ GQC CK V G +C+ C G
Sbjct: 997 PCHCHVAGASNGTCDAVTGQCFCKEFVTGSKCDTCVPG 1034
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 32/78 (41%), Gaps = 12/78 (15%)
Query: 7 HEALPCQCDIDGS--KSFECEQFGGQCQCKPNVIGRRCEMCATGYYGFP----------D 54
H LPC C+ G+ S C++ GQC CK V G RC C + D
Sbjct: 838 HLCLPCNCEKTGTVNGSLLCDKSTGQCPCKLGVTGLRCHQCKPHRFNLTMDNPQGCQACD 897
Query: 55 CHPCNCPFTAVCDSYTGK 72
C ++CD +G+
Sbjct: 898 CDSLGTLLGSMCDPVSGQ 915
Score = 32.7 bits (73), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 31/69 (44%), Gaps = 9/69 (13%)
Query: 12 CQCDIDGSK-SFECEQFGGQCQCKPNVIGRRCEMCATGYYGFPD----CHPCNCPFTA-- 64
C CD G+ C+ GQC C P+ RRC C G Y P C PC C A
Sbjct: 896 CDCDSLGTLLGSMCDPVSGQCLCLPHRQERRCVQCQPGCYSSPSNATGCLPCLCHTVATK 955
Query: 65 --VCDSYTG 71
+C+S TG
Sbjct: 956 NCICNSVTG 964
Score = 30.0 bits (66), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 29/72 (40%), Gaps = 9/72 (12%)
Query: 10 LPCQCDIDGSKSFECEQFGGQCQC-KPNVIGRRCEMCATGYYGFP----DCHPCNCPF-- 62
LPC C +K+ C G C C P+ G C Y+ F C PC+C
Sbjct: 945 LPCLCHTVATKNCICNSVTGHCYCPDPSTTGLSWHQCQDRYFRFDPLTGRCRPCHCHVAG 1004
Query: 63 --TAVCDSYTGK 72
CD+ TG+
Sbjct: 1005 ASNGTCDAVTGQ 1016
>sp|Q9NYQ6|CELR1_HUMAN Cadherin EGF LAG seven-pass G-type receptor 1 OS=Homo sapiens
GN=CELSR1 PE=1 SV=1
Length = 3014
Score = 48.9 bits (115), Expect = 9e-06, Method: Composition-based stats.
Identities = 20/36 (55%), Positives = 22/36 (61%)
Query: 10 LPCQCDIDGSKSFECEQFGGQCQCKPNVIGRRCEMC 45
LPC C GS S C+ GQC CKP VIGR+C C
Sbjct: 2001 LPCDCFPHGSHSRTCDMATGQCACKPGVIGRQCNRC 2036
Score = 37.7 bits (86), Expect = 0.019, Method: Composition-based stats.
Identities = 22/71 (30%), Positives = 28/71 (39%), Gaps = 19/71 (26%)
Query: 11 PCQCDIDGSKSFECEQFGGQCQCKPNVIGRRCEMCATGYYGF---PDCHPCNC----PFT 63
PC C + +C + GQCQCK N YY C PC+C +
Sbjct: 1965 PCHCAVSKGFDPDCNKTNGQCQCKEN------------YYKLLAQDTCLPCDCFPHGSHS 2012
Query: 64 AVCDSYTGKLA 74
CD TG+ A
Sbjct: 2013 RTCDMATGQCA 2023
Score = 34.7 bits (78), Expect = 0.15, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 25/54 (46%), Gaps = 9/54 (16%)
Query: 28 GGQCQCKPNVIGRRCEM-----CATGYYGFPDCHPCNCP----FTAVCDSYTGK 72
G C+C P+ G CE C G++G P C PC+C F C+ G+
Sbjct: 1931 GYVCECGPSHYGPYCENKLDLPCPRGWWGNPVCGPCHCAVSKGFDPDCNKTNGQ 1984
>sp|Q2QI47|USH2A_MOUSE Usherin OS=Mus musculus GN=Ush2A PE=1 SV=2
Length = 5193
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 34/69 (49%), Gaps = 7/69 (10%)
Query: 11 PCQCDIDGSKSFECEQFGGQCQCKPNVIGRRCEMCATGYYGFP-------DCHPCNCPFT 63
PCQC++ GS + C+ GQC CK G +C+ C +YG P DC
Sbjct: 743 PCQCNLHGSVNQLCDPLSGQCACKKEAKGLKCDSCRENFYGLPWSACEVCDCSKAGSQPG 802
Query: 64 AVCDSYTGK 72
VCD+ TG+
Sbjct: 803 TVCDTETGQ 811
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 33/63 (52%), Gaps = 7/63 (11%)
Query: 12 CQCDIDGSK--SFECEQFGGQCQCKPNVIGRRCEMCATGYYGF----PD-CHPCNCPFTA 64
C C+ G++ S C+ GGQC CK V GR+C C G+Y PD C PCNC +
Sbjct: 638 CDCNRAGTRNGSLHCDPIGGQCDCKRRVSGRQCLQCQDGFYDLQALDPDGCRPCNCNPSG 697
Query: 65 VCD 67
D
Sbjct: 698 TVD 700
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 35/70 (50%), Gaps = 9/70 (12%)
Query: 12 CQCDIDGS-KSFECEQFGGQCQCKPNVIGRRCEMCATGYYGFPD----CHPCNC----PF 62
C CD G+ C+ GQC C P+ GRRCE C G+Y P C PC C
Sbjct: 897 CDCDSLGTLPGSMCDPISGQCLCLPHRQGRRCEQCQPGFYSSPSNATGCLPCLCHTAGAV 956
Query: 63 TAVCDSYTGK 72
+ +C+S TG+
Sbjct: 957 SHICNSVTGQ 966
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 32/72 (44%), Gaps = 9/72 (12%)
Query: 10 LPCQCDIDGSKSFECEQFGGQCQC-KPNVIGRRCEMCATGYYGFP----DCHPCNCPF-- 62
LPC C G+ S C GQC C P+ GR C C Y+ F C PC+C
Sbjct: 946 LPCLCHTAGAVSHICNSVTGQCSCHDPSTTGRSCHQCQESYFRFDPLTGRCRPCHCHVAG 1005
Query: 63 --TAVCDSYTGK 72
CD+ TG+
Sbjct: 1006 ASNGTCDAVTGQ 1017
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 33/73 (45%), Gaps = 11/73 (15%)
Query: 11 PCQCDIDGS--KSFECEQFGGQCQCKPNVIGRRCEMCATGY-----YGFPDCHPCNCPF- 62
PC C+ G+ C Q GQC CK NVIG RC C G+ + C PC C
Sbjct: 690 PCNCNPSGTVDGDITCHQNSGQCSCKANVIGLRCNRCNFGFKFLQSFNGDGCEPCQCNLH 749
Query: 63 ---TAVCDSYTGK 72
+CD +G+
Sbjct: 750 GSVNQLCDPLSGQ 762
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 33/73 (45%), Gaps = 12/73 (16%)
Query: 12 CQCDIDGSK-SFECEQFGGQCQCKPNVIGRRCEMCATGYYGF--PDCH---PCNCPFTAV 65
C C GS+ C+ GQC CKPNV GR+C C GY+ D H CNC
Sbjct: 792 CDCSKAGSQPGTVCDTETGQCVCKPNVGGRQCSQCKAGYFNLYQNDSHLCLTCNCEKMGT 851
Query: 66 ------CDSYTGK 72
CD TG+
Sbjct: 852 VNGSLRCDKSTGQ 864
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 21/38 (55%)
Query: 11 PCQCDIDGSKSFECEQFGGQCQCKPNVIGRRCEMCATG 48
PC C + G+ + C+ GQC CK V G +C+ C G
Sbjct: 998 PCHCHVAGASNGTCDAVTGQCFCKEFVTGSKCDTCVPG 1035
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 25/56 (44%), Gaps = 2/56 (3%)
Query: 7 HEALPCQCDIDGS--KSFECEQFGGQCQCKPNVIGRRCEMCATGYYGFPDCHPCNC 60
H L C C+ G+ S C++ GQC CK V G RC C + +P C
Sbjct: 839 HLCLTCNCEKMGTVNGSLRCDKSTGQCPCKLGVTGLRCHQCKPHRFNLTMDNPQGC 894
>sp|O35161|CELR1_MOUSE Cadherin EGF LAG seven-pass G-type receptor 1 OS=Mus musculus
GN=Celsr1 PE=2 SV=3
Length = 3034
Score = 48.5 bits (114), Expect = 1e-05, Method: Composition-based stats.
Identities = 20/36 (55%), Positives = 22/36 (61%)
Query: 10 LPCQCDIDGSKSFECEQFGGQCQCKPNVIGRRCEMC 45
LPC C GS S C+ GQC CKP VIGR+C C
Sbjct: 2016 LPCDCFPHGSHSRACDMDTGQCACKPGVIGRQCNRC 2051
Score = 38.9 bits (89), Expect = 0.009, Method: Composition-based stats.
Identities = 23/71 (32%), Positives = 29/71 (40%), Gaps = 19/71 (26%)
Query: 11 PCQCDIDGSKSFECEQFGGQCQCKPNVIGRRCEMCATGYYGFP---DCHPCNC----PFT 63
PC C + +C + GQCQCK N YY P C PC+C +
Sbjct: 1980 PCHCAVSQGFDPDCNKTNGQCQCKEN------------YYKPPAQDACLPCDCFPHGSHS 2027
Query: 64 AVCDSYTGKLA 74
CD TG+ A
Sbjct: 2028 RACDMDTGQCA 2038
Score = 37.0 bits (84), Expect = 0.037, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 25/54 (46%), Gaps = 9/54 (16%)
Query: 28 GGQCQCKPNVIGRRCEM-----CATGYYGFPDCHPCNCP----FTAVCDSYTGK 72
G C+C P G+ CE C G++G P C PC+C F C+ G+
Sbjct: 1946 GYSCECGPGHYGQYCENKVDLPCPKGWWGNPVCGPCHCAVSQGFDPDCNKTNGQ 1999
>sp|Q61087|LAMB3_MOUSE Laminin subunit beta-3 OS=Mus musculus GN=Lamb3 PE=2 SV=2
Length = 1168
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 12/79 (15%)
Query: 6 LHEA-LPCQCDIDGS-KSFECEQFGGQCQCKPNVIGRRCEMCATGYYGF-----PDCHPC 58
+HE +PC+CD DG+ + C++ GQC CK V G RC++C G+ G CH C
Sbjct: 369 IHETCIPCECDPDGAVQGAPCDRLTGQCVCKEYVQGERCDLCKPGFTGLTFANPKGCHAC 428
Query: 59 NCPFTAV-----CDSYTGK 72
+C C+ TG+
Sbjct: 429 DCSILGARKDMPCEEETGR 447
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 37/69 (53%), Gaps = 8/69 (11%)
Query: 12 CQCDIDGS-KSFECEQFGGQCQCKPNVIGRRCEMCATGYYGFPD---CHPCNC----PFT 63
C C I G+ K CE+ G+C C PNV+G +C+ CA ++ C PC C +
Sbjct: 428 CDCSILGARKDMPCEEETGRCLCLPNVVGPKCDQCAPSHWKLASGLGCEPCACDPRNSLS 487
Query: 64 AVCDSYTGK 72
+ C+ +TG+
Sbjct: 488 SQCNQFTGQ 496
Score = 36.2 bits (82), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Query: 12 CQCDIDGSKSFECEQFGGQCQCKPNVIGRRCEMCATGY-YGFPDCHPCNCPFTA 64
C CD G++ C++ G+C C+P G RC+ C G+ +P C C+ F A
Sbjct: 531 CDCDFRGTEGPGCDKASGRCLCRPGFTGPRCDQCQRGHCDRYPVCVACHSCFQA 584
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 30/73 (41%), Gaps = 11/73 (15%)
Query: 11 PCQCDIDGSKSFECEQFGGQCQCKPNVIGRRC-----EMCATGYYGF--PDCHPCNCPFT 63
PC CD S S +C QF GQC C+ G C C YG C C+C F
Sbjct: 477 PCACDPRNSLSSQCNQFTGQCPCREGFGGLTCSSAAIRQCPDQTYGHVATGCRACDCDFR 536
Query: 64 AV----CDSYTGK 72
CD +G+
Sbjct: 537 GTEGPGCDKASGR 549
>sp|Q9H1U4|MEGF9_HUMAN Multiple epidermal growth factor-like domains protein 9 OS=Homo
sapiens GN=MEGF9 PE=2 SV=3
Length = 602
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 35/64 (54%), Gaps = 4/64 (6%)
Query: 11 PCQCDIDGSKSFECEQFGGQCQCKPNVIGRRCEMCATGYYGFPD--CHPCNC-PFTAVCD 67
PC C G+ S C G+CQCK VIG C+ C GYYGF C PC C +A CD
Sbjct: 253 PCDCSPHGALSIPCNS-SGKCQCKVGVIGSICDRCQDGYYGFSKNGCLPCQCNNRSASCD 311
Query: 68 SYTG 71
+ TG
Sbjct: 312 ALTG 315
Score = 37.7 bits (86), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 28/55 (50%), Gaps = 8/55 (14%)
Query: 12 CQCDIDGSKSF-ECEQFGGQCQCKPNVIGRRCEMCATGYY-----GFPDCHPCNC 60
C C + GS + C Q GQC+C+P G CE C G+Y G C PC+C
Sbjct: 204 CNCSVVGSLNVNRCNQTTGQCECRPGYQGLHCETCKEGFYLNYTSGL--CQPCDC 256
Score = 35.8 bits (81), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 25/46 (54%), Gaps = 4/46 (8%)
Query: 10 LPCQCDIDGSKSFECEQFGGQC-QCKPNVIGRRCEMCATGYYGFPD 54
LPCQC+ ++S C+ G C C+ N G CE C G+Y PD
Sbjct: 299 LPCQCN---NRSASCDALTGACLNCQENSKGNHCEECKEGFYQSPD 341
>sp|Q5RB89|NET4_PONAB Netrin-4 OS=Pongo abelii GN=NTN4 PE=2 SV=1
Length = 628
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 39/92 (42%), Gaps = 10/92 (10%)
Query: 11 PCQCDIDGSKSFE------CEQFGGQCQCKPNVIGRRCEMCATGYYGFPD--CHPCNCPF 62
PC C GS C+ G C CKP V GR C+ C GY+GF D C PC+C
Sbjct: 394 PCSCHPVGSAVLPANSVTFCDPSNGDCPCKPGVAGRHCDRCMVGYWGFGDYGCRPCDC-- 451
Query: 63 TAVCDSYTGKLAQVLIQVVTFPNYPSCKLWYN 94
CD TG + +P + +N
Sbjct: 452 AGSCDPITGDCISSHTDIDWHHEFPDFRPVHN 483
>sp|Q1LVF0|LAMC1_DANRE Laminin subunit gamma-1 OS=Danio rerio GN=lamc1 PE=2 SV=2
Length = 1593
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 39/70 (55%), Gaps = 4/70 (5%)
Query: 11 PCQCDIDGSKSFECEQFGGQCQCKPNVIGRRCEMCATGYY---GFPDCHPCNCPFTAVCD 67
PC CD +GS+S +C++ G+C C+P +G RC+MC Y+ P C C ++ V D
Sbjct: 966 PCDCDPEGSESAQCKE-DGRCHCRPGFVGSRCDMCEENYFYNRSTPGCQQCPNCYSLVRD 1024
Query: 68 SYTGKLAQVL 77
+ ++L
Sbjct: 1025 KVNQQRQKLL 1034
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 31/51 (60%), Gaps = 2/51 (3%)
Query: 12 CQCDIDGSKSFECEQFGGQCQCKPNVIGRRCEMCATGYYGFPD--CHPCNC 60
C C+ GS + +C+ GQC+C+P V G+ CE C ++GF C PC+C
Sbjct: 919 CNCNPIGSTNGQCDIVSGQCECQPGVTGQHCERCEVNFFGFSSSGCKPCDC 969
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 38/68 (55%), Gaps = 6/68 (8%)
Query: 10 LPCQCDIDGSKSFECEQFGGQCQCKPNVIGRRCEMCATGYYGFPD--CHPCNCP---FTA 64
L C C+ GS S +C+ G +C CKP V+G +C+ C GY+ + C PC+C T
Sbjct: 380 LSCGCNPVGSLSTQCDNTG-RCSCKPGVMGDKCDRCQPGYHSLSEAGCRPCSCNPAGSTQ 438
Query: 65 VCDSYTGK 72
CD TG+
Sbjct: 439 ECDVQTGR 446
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 35/67 (52%), Gaps = 7/67 (10%)
Query: 11 PCQCDIDGSKSFECEQFGGQCQCKPNVIGRRCEMCATGYYGFP-----DCHPCNC-PFTA 64
PC C+ GS + EC+ G+CQCK NV G C+ C GY+ C PC C +
Sbjct: 428 PCSCNPAGS-TQECDVQTGRCQCKENVDGFNCDRCKLGYFNLDPQNPQGCTPCFCFQHST 486
Query: 65 VCDSYTG 71
VC+S G
Sbjct: 487 VCESADG 493
Score = 37.4 bits (85), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 27/55 (49%), Gaps = 5/55 (9%)
Query: 11 PCQCDIDGS--KSFECEQFGGQCQCKPNVIGRRCEMCATGYYGFPD---CHPCNC 60
PC+C G+ + C Q GQC C P+VI R C C G+Y C CNC
Sbjct: 867 PCKCSPYGTVDRQTACSQVTGQCPCLPHVINRDCGACELGFYNLQSGKGCERCNC 921
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 23/52 (44%), Gaps = 6/52 (11%)
Query: 21 SFECEQFGGQCQCKPNVIGRRCEMCATGYYG------FPDCHPCNCPFTAVC 66
S C+ G C C+ N G CE C G+YG DC C CP A C
Sbjct: 714 SDTCDPETGMCNCQHNTAGLSCERCKDGFYGDSTVGSSSDCKACPCPAGATC 765
>sp|Q9V5N8|STAN_DROME Protocadherin-like wing polarity protein stan OS=Drosophila
melanogaster GN=stan PE=1 SV=4
Length = 3579
Score = 45.8 bits (107), Expect = 7e-05, Method: Composition-based stats.
Identities = 19/40 (47%), Positives = 23/40 (57%)
Query: 10 LPCQCDIDGSKSFECEQFGGQCQCKPNVIGRRCEMCATGY 49
L C C GS S C GQC+C+ VIGRRC+ C+ Y
Sbjct: 2093 LSCDCYSIGSFSGACNPLTGQCECREGVIGRRCDSCSNPY 2132
Score = 36.2 bits (82), Expect = 0.056, Method: Composition-based stats.
Identities = 20/69 (28%), Positives = 30/69 (43%), Gaps = 19/69 (27%)
Query: 11 PCQCDIDGSKSFECEQFGGQCQCKPNVIGRRCEMCATGYYGFPD---CHPCNC----PFT 63
PC+CD+ +C + GQC CK N +Y P+ C C+C F+
Sbjct: 2057 PCRCDLAQGYHPDCNKTTGQCYCKTN------------HYQPPNETACLSCDCYSIGSFS 2104
Query: 64 AVCDSYTGK 72
C+ TG+
Sbjct: 2105 GACNPLTGQ 2113
>sp|P02468|LAMC1_MOUSE Laminin subunit gamma-1 OS=Mus musculus GN=Lamc1 PE=1 SV=2
Length = 1607
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 31/51 (60%), Gaps = 2/51 (3%)
Query: 12 CQCDIDGSKSFECEQFGGQCQCKPNVIGRRCEMCATGYYGF--PDCHPCNC 60
C C GS + +C+ GQC+C+P + G+ CE C T ++GF C PC+C
Sbjct: 933 CDCHALGSTNGQCDIRTGQCECQPGITGQHCERCETNHFGFGPEGCKPCDC 983
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 38/67 (56%), Gaps = 6/67 (8%)
Query: 11 PCQCDIDGSKSFECEQFGGQCQCKPNVIGRRCEMCATGYYGFPD--CHPCNCPF---TAV 65
PC C GS S +C+ +G +C CKP V+G +C+ C G++ + C PC+C T
Sbjct: 395 PCHCSPVGSLSTQCDSYG-RCSCKPGVMGDKCDRCQPGFHSLTEAGCRPCSCDLRGSTDE 453
Query: 66 CDSYTGK 72
C+ TG+
Sbjct: 454 CNVETGR 460
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Query: 11 PCQCDIDGSKSFECEQFGGQCQCKPNVIGRRCEMCATGYYGFPDCHPCNC 60
PC CD+ GS + EC G+C CK NV G CE C G++ +P C
Sbjct: 442 PCSCDLRGS-TDECNVETGRCVCKDNVEGFNCERCKPGFFNLESSNPKGC 490
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 25/52 (48%), Gaps = 6/52 (11%)
Query: 21 SFECEQFGGQCQCKPNVIGRRCEMCATGYYG------FPDCHPCNCPFTAVC 66
S C+ G C C+ N G CE C+ GYYG DC PC CP + C
Sbjct: 728 SETCDPETGVCDCRDNTAGPHCEKCSDGYYGDSTLGTSSDCQPCPCPGGSSC 779
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 4/60 (6%)
Query: 11 PCQCDIDGSKSFECEQFGGQCQCKPNVIGRRCEMCATGYY---GFPDCHPCNCPFTAVCD 67
PC C +GS S +C+ G+C+C+ +G RC+ C Y+ +P C C + V D
Sbjct: 980 PCDCHHEGSLSLQCKD-DGRCECREGFVGNRCDQCEENYFYNRSWPGCQECPACYRLVKD 1038
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 25/56 (44%), Gaps = 7/56 (12%)
Query: 24 CEQFGGQCQCKPNVIGRRCEMCATGYYGFPD---CHPCNC----PFTAVCDSYTGK 72
C GQCQC P+V GR C C GYY C C+C CD TG+
Sbjct: 896 CNPVTGQCQCLPHVSGRDCGTCDPGYYNLQSGQGCERCDCHALGSTNGQCDIRTGQ 951
Score = 32.7 bits (73), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 36/85 (42%), Gaps = 20/85 (23%)
Query: 2 TISFLHEALPCQCDIDGSKSFEC---------EQFGGQC-QCKPNVIGRRCEMCATGYYG 51
T E+LPC C+ +S EC GG C C+ N G +CE C ++
Sbjct: 330 TAESASESLPCDCN---GRSQECYFDPELYRSTGHGGHCTNCRDNTDGAKCERCRENFFR 386
Query: 52 FPD---CHPCNC----PFTAVCDSY 69
+ C PC+C + CDSY
Sbjct: 387 LGNTEACSPCHCSPVGSLSTQCDSY 411
>sp|O88278|CELR3_RAT Cadherin EGF LAG seven-pass G-type receptor 3 OS=Rattus norvegicus
GN=Celsr3 PE=2 SV=1
Length = 3313
Score = 44.7 bits (104), Expect = 2e-04, Method: Composition-based stats.
Identities = 17/40 (42%), Positives = 22/40 (55%)
Query: 10 LPCQCDIDGSKSFECEQFGGQCQCKPNVIGRRCEMCATGY 49
LPC C GS S C GQC C+P +GR+C C + +
Sbjct: 2066 LPCDCYPVGSTSRSCAPHSGQCPCRPGALGRQCNSCDSPF 2105
Score = 39.7 bits (91), Expect = 0.005, Method: Composition-based stats.
Identities = 21/71 (29%), Positives = 30/71 (42%), Gaps = 10/71 (14%)
Query: 11 PCQCDIDGSKSFECEQFGGQCQCKPNVIGRRCE-----MCATGYYGFPDCHPCNCP---- 61
PCQ + + + G C C G+ CE C G++G P C PCNC
Sbjct: 1980 PCQ-NQGSCRHLQGGPHGYTCDCASGYFGQHCEHRMDQQCPRGWWGSPTCGPCNCDVHKG 2038
Query: 62 FTAVCDSYTGK 72
F C+ +G+
Sbjct: 2039 FDPNCNKTSGQ 2049
Score = 32.7 bits (73), Expect = 0.60, Method: Composition-based stats.
Identities = 16/50 (32%), Positives = 19/50 (38%), Gaps = 9/50 (18%)
Query: 11 PCQCDIDGSKSFECEQFGGQCQCKPNVIGRRCEMCATGYYGFPDCHPCNC 60
PC CD+ C + GQC CK R G C PC+C
Sbjct: 2030 PCNCDVHKGFDPNCNKTSGQCHCKEFHYRPR---------GSDSCLPCDC 2070
>sp|Q91ZI0|CELR3_MOUSE Cadherin EGF LAG seven-pass G-type receptor 3 OS=Mus musculus
GN=Celsr3 PE=2 SV=2
Length = 3301
Score = 44.7 bits (104), Expect = 2e-04, Method: Composition-based stats.
Identities = 17/40 (42%), Positives = 22/40 (55%)
Query: 10 LPCQCDIDGSKSFECEQFGGQCQCKPNVIGRRCEMCATGY 49
LPC C GS S C GQC C+P +GR+C C + +
Sbjct: 2064 LPCDCYPVGSTSRSCAPHSGQCPCRPGALGRQCNSCDSPF 2103
Score = 39.3 bits (90), Expect = 0.008, Method: Composition-based stats.
Identities = 21/71 (29%), Positives = 29/71 (40%), Gaps = 10/71 (14%)
Query: 11 PCQCDIDGSKSFECEQFGGQCQCKPNVIGRRCE-----MCATGYYGFPDCHPCNCP---- 61
PCQ + + + G C C G+ CE C G++G P C PCNC
Sbjct: 1978 PCQ-NQGSCRHLQGAPHGYTCDCVSGYFGQHCEHRVDQQCPRGWWGSPTCGPCNCDVHKG 2036
Query: 62 FTAVCDSYTGK 72
F C+ G+
Sbjct: 2037 FDPNCNKTNGQ 2047
Score = 32.7 bits (73), Expect = 0.62, Method: Composition-based stats.
Identities = 16/50 (32%), Positives = 19/50 (38%), Gaps = 9/50 (18%)
Query: 11 PCQCDIDGSKSFECEQFGGQCQCKPNVIGRRCEMCATGYYGFPDCHPCNC 60
PC CD+ C + GQC CK R G C PC+C
Sbjct: 2028 PCNCDVHKGFDPNCNKTNGQCHCKEFHYRPR---------GSDSCLPCDC 2068
>sp|Q90404|AGRIN_DIPOM Agrin (Fragment) OS=Diplobatis ommata GN=AGRN PE=2 SV=1
Length = 1328
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 33/65 (50%), Gaps = 9/65 (13%)
Query: 12 CQCDIDGSKSFECEQFGGQCQCKPNVIGRRCEMCATGYYGF--------PDCHPCNC-PF 62
C+C+ GS S C GQC CKP V G +C+ C G++ F C PCNC P
Sbjct: 79 CECNRYGSYSKTCSPSSGQCSCKPGVGGLKCDRCEPGFWNFRGIVTDEKSGCTPCNCYPL 138
Query: 63 TAVCD 67
AV D
Sbjct: 139 GAVRD 143
Score = 32.3 bits (72), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 19/38 (50%)
Query: 11 PCQCDIDGSKSFECEQFGGQCQCKPNVIGRRCEMCATG 48
PC C G+ +CEQ G C CK + G +C C G
Sbjct: 132 PCNCYPLGAVRDDCEQMSGLCSCKAGISGMKCNQCPNG 169
>sp|Q9NYQ7|CELR3_HUMAN Cadherin EGF LAG seven-pass G-type receptor 3 OS=Homo sapiens
GN=CELSR3 PE=1 SV=2
Length = 3312
Score = 44.7 bits (104), Expect = 2e-04, Method: Composition-based stats.
Identities = 17/40 (42%), Positives = 22/40 (55%)
Query: 10 LPCQCDIDGSKSFECEQFGGQCQCKPNVIGRRCEMCATGY 49
LPC C GS S C GQC C+P +GR+C C + +
Sbjct: 2075 LPCDCYPVGSTSRSCAPHSGQCPCRPGALGRQCNSCDSPF 2114
Score = 36.6 bits (83), Expect = 0.042, Method: Composition-based stats.
Identities = 21/71 (29%), Positives = 27/71 (38%), Gaps = 10/71 (14%)
Query: 11 PCQCDIDGSKSFECEQFGGQCQCKPNVIGRRCE-----MCATGYYGFPDCHPCNCP---- 61
PCQ + + G C C G CE C G++G P C PCNC
Sbjct: 1989 PCQ-NQGSCRHLPGAPHGYTCDCVGGYFGHHCEHRMDQQCPRGWWGSPTCGPCNCDVHKG 2047
Query: 62 FTAVCDSYTGK 72
F C+ G+
Sbjct: 2048 FDPNCNKTNGQ 2058
Score = 32.7 bits (73), Expect = 0.69, Method: Composition-based stats.
Identities = 16/50 (32%), Positives = 19/50 (38%), Gaps = 9/50 (18%)
Query: 11 PCQCDIDGSKSFECEQFGGQCQCKPNVIGRRCEMCATGYYGFPDCHPCNC 60
PC CD+ C + GQC CK R G C PC+C
Sbjct: 2039 PCNCDVHKGFDPNCNKTNGQCHCKEFHYRPR---------GSDSCLPCDC 2079
>sp|Q9JI33|NET4_MOUSE Netrin-4 OS=Mus musculus GN=Ntn4 PE=2 SV=2
Length = 628
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 33/73 (45%), Gaps = 4/73 (5%)
Query: 24 CEQFGGQCQCKPNVIGRRCEMCATGYYGFPD--CHPCNCPFTAVCDSYTGKLAQVLIQVV 81
C+ G C CKP V G C+ C GY+GF D C PC+C CD TG V
Sbjct: 413 CDPSNGDCPCKPGVAGPHCDRCMVGYWGFGDYGCRPCDC--AGSCDPLTGDCISSNADVD 470
Query: 82 TFPNYPSCKLWYN 94
+ P+ +N
Sbjct: 471 WYHEVPAFHSMHN 483
>sp|P11047|LAMC1_HUMAN Laminin subunit gamma-1 OS=Homo sapiens GN=LAMC1 PE=1 SV=3
Length = 1609
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 30/51 (58%), Gaps = 2/51 (3%)
Query: 12 CQCDIDGSKSFECEQFGGQCQCKPNVIGRRCEMCATGYYGF--PDCHPCNC 60
C C GS + +C+ GQC+C+P + G+ CE C ++GF C PC+C
Sbjct: 935 CDCHALGSTNGQCDIRTGQCECQPGITGQHCERCEVNHFGFGPEGCKPCDC 985
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 12 CQCDIDGSKSFECEQFGGQCQCKPNVIGRRCEMCATGYYGFPD--CHPCNCPFTAVCDS 68
C C GS S +C+ +G +C CKP V+G +C+ C G++ + C PC+C + D
Sbjct: 398 CHCSPVGSLSTQCDSYG-RCSCKPGVMGDKCDRCQPGFHSLTEAGCRPCSCDPSGSIDE 455
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 25/52 (48%), Gaps = 6/52 (11%)
Query: 21 SFECEQFGGQCQCKPNVIGRRCEMCATGYYG------FPDCHPCNCPFTAVC 66
S C+ G C C+ N G CE C+ GYYG DC PC CP + C
Sbjct: 730 SETCDPETGVCNCRDNTAGPHCEKCSDGYYGDSTAGTSSDCQPCPCPGGSSC 781
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 4/51 (7%)
Query: 11 PCQCDIDGSKSFECEQFGGQCQCKPNVIGRRCEMCATGYY---GFPDCHPC 58
PC C +GS S +C+ G+C+C+ +G RC+ C Y+ +P C C
Sbjct: 982 PCDCHPEGSLSLQCKD-DGRCECREGFVGNRCDQCEENYFYNRSWPGCQEC 1031
Score = 37.7 bits (86), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Query: 11 PCQCDIDGSKSFECEQFGGQCQCKPNVIGRRCEMCATGYYGFPDCHPCNC 60
PC CD GS EC G+C CK NV G CE C G++ +P C
Sbjct: 444 PCSCDPSGSID-ECNIETGRCVCKDNVEGFNCERCKPGFFNLESSNPRGC 492
Score = 32.3 bits (72), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 9/70 (12%)
Query: 12 CQCDIDGS--KSFECEQFGGQCQCKPNVIGRRCEMCATGYYGFPD---CHPCNC----PF 62
C C++ G+ + C GQC+C P+V G+ C C G+Y C C+C
Sbjct: 884 CNCNLYGTMKQQSSCNPVTGQCECLPHVTGQDCGACDPGFYNLQSGQGCERCDCHALGST 943
Query: 63 TAVCDSYTGK 72
CD TG+
Sbjct: 944 NGQCDIRTGQ 953
>sp|A0JP86|LAMC1_XENTR Laminin subunit gamma-1 OS=Xenopus tropicalis GN=lamc1 PE=2 SV=1
Length = 1592
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 38/66 (57%), Gaps = 6/66 (9%)
Query: 12 CQCDIDGSKSFECEQFGGQCQCKPNVIGRRCEMCATGYYGFPD--CHPCNCP---FTAVC 66
CQC+ GS S +C+ +G +C CKP V+G +C+ C G++ + C PC C T C
Sbjct: 381 CQCNPVGSLSTQCDNYG-RCSCKPGVMGEKCDRCQPGFHSLTEAGCRPCACNPAGSTDEC 439
Query: 67 DSYTGK 72
+ TG+
Sbjct: 440 NVETGR 445
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 37/72 (51%), Gaps = 7/72 (9%)
Query: 11 PCQCDIDGSKSFECEQFGGQCQCKPNVIGRRCEMCATGYY---GFPDCHPCNCPFTAVCD 67
PC CD +GS S +C++ G+C+CK +G RC+ C Y+ P C C + V D
Sbjct: 965 PCDCDPEGSGSLQCKE-DGRCECKSGFVGTRCDQCEENYFYNRSGPGCQECPACYRLVKD 1023
Query: 68 SYT---GKLAQV 76
GKL ++
Sbjct: 1024 KVNEQRGKLQEL 1035
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 30/51 (58%), Gaps = 2/51 (3%)
Query: 12 CQCDIDGSKSFECEQFGGQCQCKPNVIGRRCEMCATGYYGF--PDCHPCNC 60
C C GS S +C+ GQC+C P + G++C+ C ++GF C PC+C
Sbjct: 918 CDCHSLGSTSGQCDVRTGQCECHPGISGQQCQQCEPNHFGFGPEGCKPCDC 968
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 25/52 (48%), Gaps = 6/52 (11%)
Query: 21 SFECEQFGGQCQCKPNVIGRRCEMCATGYYG------FPDCHPCNCPFTAVC 66
S C+ G C C+ N G CE C+ GYYG DC PC CP + C
Sbjct: 713 SDTCDPESGVCDCQHNTAGPHCERCSEGYYGDSTTGSASDCQPCPCPGGSSC 764
Score = 38.1 bits (87), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 35/76 (46%), Gaps = 7/76 (9%)
Query: 11 PCQCDIDGSKSFECEQFGGQCQCKPNVIGRRCEMCATGYYGFPDCHPCNCP------FTA 64
PC C+ GS + EC G+C CK NV G CE C G++ + +P C ++
Sbjct: 427 PCACNPAGS-TDECNVETGRCSCKDNVEGFNCERCKPGFFHLDEANPRGCTPCFCYGHSS 485
Query: 65 VCDSYTGKLAQVLIQV 80
VC S G ++
Sbjct: 486 VCSSAEGYRVSSIVST 501
Score = 34.3 bits (77), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 26/56 (46%), Gaps = 7/56 (12%)
Query: 24 CEQFGGQCQCKPNVIGRRCEMCATGYYGF---PDCHPCNC----PFTAVCDSYTGK 72
C Q GQC+C P+V R C C G+Y C C+C + CD TG+
Sbjct: 881 CNQVTGQCECLPHVTERDCSACEPGFYNLLSGRGCERCDCHSLGSTSGQCDVRTGQ 936
>sp|Q9HCU4|CELR2_HUMAN Cadherin EGF LAG seven-pass G-type receptor 2 OS=Homo sapiens
GN=CELSR2 PE=1 SV=1
Length = 2923
Score = 43.1 bits (100), Expect = 5e-04, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 9/54 (16%)
Query: 28 GGQCQCKPNVIGRRCEM-----CATGYYGFPDCHPCNCP----FTAVCDSYTGK 72
G C+C PN +G CE C G++G P C PCNC F C+ +G+
Sbjct: 1852 GYTCECPPNYLGPYCETRIDQPCPRGWWGHPTCGPCNCDVSKGFDPDCNKTSGE 1905
Score = 43.1 bits (100), Expect = 6e-04, Method: Composition-based stats.
Identities = 19/36 (52%), Positives = 22/36 (61%)
Query: 10 LPCQCDIDGSKSFECEQFGGQCQCKPNVIGRRCEMC 45
L C C GS S C+ GQC CKP VIGR+C+ C
Sbjct: 1922 LLCDCYPTGSLSRVCDPEDGQCPCKPGVIGRQCDRC 1957
Score = 35.0 bits (79), Expect = 0.15, Method: Composition-based stats.
Identities = 20/69 (28%), Positives = 28/69 (40%), Gaps = 19/69 (27%)
Query: 11 PCQCDIDGSKSFECEQFGGQCQCKPNVIGRRCEMCATGYY---GFPDCHPCNC----PFT 63
PC CD+ +C + G+C CK N +Y G P C C+C +
Sbjct: 1886 PCNCDVSKGFDPDCNKTSGECHCKEN------------HYRPPGSPTCLLCDCYPTGSLS 1933
Query: 64 AVCDSYTGK 72
VCD G+
Sbjct: 1934 RVCDPEDGQ 1942
>sp|Q8BH27|MEGF9_MOUSE Multiple epidermal growth factor-like domains protein 9 OS=Mus
musculus GN=Megf9 PE=2 SV=1
Length = 600
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Query: 10 LPCQCDIDGSKSFECEQFGGQCQCKPNVIGRRCEMCATGYYGF--PDCHPCNCPFTA-VC 66
LPC C G+ S C G CQCK V G C+ C G+YGF C PC C + C
Sbjct: 250 LPCHCSPHGAVSILCNS-SGNCQCKVGVTGSMCDKCQDGHYGFGKTGCLPCQCNNRSDSC 308
Query: 67 DSYTG 71
D +TG
Sbjct: 309 DVHTG 313
Score = 36.2 bits (82), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 29/56 (51%), Gaps = 8/56 (14%)
Query: 10 LPCQCDIDGSKSFECEQFGGQC-QCKPNVIGRRCEMCATGYYGFPD----CHPCNC 60
LPCQC+ ++S C+ G C C+ N G CE C G+Y PD CH C C
Sbjct: 297 LPCQCN---NRSDSCDVHTGACLNCQENSKGEHCEECKEGFYPSPDAAKQCHRCPC 349
>sp|Q61092|LAMC2_MOUSE Laminin subunit gamma-2 OS=Mus musculus GN=Lamc2 PE=1 SV=2
Length = 1191
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 10 LPCQCDIDGSKSFECEQFGGQCQCKPNVIGRRCEMCATGYYGFPDC 55
LPC C GS S C+ GQC+CKP V G+RC+ C G++ D
Sbjct: 82 LPCNCHSKGSLSAGCDN-SGQCRCKPGVTGQRCDRCQPGFHMLTDA 126
Score = 35.8 bits (81), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 18/32 (56%)
Query: 29 GQCQCKPNVIGRRCEMCATGYYGFPDCHPCNC 60
G+C CKP V G RC+ C GYY +P C
Sbjct: 153 GRCVCKPAVTGERCDRCRPGYYHLDRANPEGC 184
Score = 34.3 bits (77), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 30/59 (50%), Gaps = 10/59 (16%)
Query: 12 CQCD--IDGSKSFECEQFGGQC-QCKPNVIGRRCEMCATGYYGFP-------DCHPCNC 60
CQC+ +D + S C+Q G+C +C N G C+ C GY+G P C CNC
Sbjct: 517 CQCNNNVDPNASGNCDQLTGRCLKCIYNTAGVYCDQCKAGYFGDPLAPNPADKCRACNC 575
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 24/54 (44%), Gaps = 14/54 (25%)
Query: 33 CKPNVIGRRCEMCATGYYGFP--------DCHPCNC------PFTAVCDSYTGK 72
C P V G RCE+CA G++G P C C C + CD TG+
Sbjct: 484 CPPGVTGARCELCADGFFGDPFGERGPVRPCQRCQCNNNVDPNASGNCDQLTGR 537
Score = 29.3 bits (64), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 20/43 (46%), Gaps = 7/43 (16%)
Query: 33 CKPNVIGRRCEMCATGYYGFPD---CHPCNC----PFTAVCDS 68
C N G CE C G+Y D C PCNC +A CD+
Sbjct: 56 CNDNTAGVHCERCREGFYRHRDRDRCLPCNCHSKGSLSAGCDN 98
>sp|Q9R0M0|CELR2_MOUSE Cadherin EGF LAG seven-pass G-type receptor 2 OS=Mus musculus
GN=Celsr2 PE=1 SV=2
Length = 2920
Score = 43.1 bits (100), Expect = 5e-04, Method: Composition-based stats.
Identities = 19/36 (52%), Positives = 22/36 (61%)
Query: 10 LPCQCDIDGSKSFECEQFGGQCQCKPNVIGRRCEMC 45
L C C GS S C+ GQC CKP VIGR+C+ C
Sbjct: 1923 LLCDCYPTGSLSRVCDPEDGQCPCKPGVIGRQCDRC 1958
Score = 42.4 bits (98), Expect = 0.001, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 9/51 (17%)
Query: 31 CQCKPNVIGRRCEM-----CATGYYGFPDCHPCNCP----FTAVCDSYTGK 72
C+C PN +G CE C G++G P C PCNC F C+ +G+
Sbjct: 1856 CECLPNYLGPYCETRIDQPCPRGWWGHPTCGPCNCDVSKGFDPDCNKTSGE 1906
Score = 32.7 bits (73), Expect = 0.64, Method: Composition-based stats.
Identities = 19/69 (27%), Positives = 27/69 (39%), Gaps = 19/69 (27%)
Query: 11 PCQCDIDGSKSFECEQFGGQCQCKPNVIGRRCEMCATGYY---GFPDCHPCNC----PFT 63
PC CD+ +C + G+C CK +Y G P C C+C +
Sbjct: 1887 PCNCDVSKGFDPDCNKTSGECHCKEK------------HYRPPGSPTCLLCDCYPTGSLS 1934
Query: 64 AVCDSYTGK 72
VCD G+
Sbjct: 1935 RVCDPEDGQ 1943
>sp|Q25092|LAMB_HIRME Laminin subunit B (Fragment) OS=Hirudo medicinalis PE=2 SV=1
Length = 400
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Query: 12 CQCDIDGSKSFECEQFGGQCQCKPNVIGRRCEMCATGYYG-FPDCHPC 58
C C+ DG++S C + GQC+C V G C+ C G YG P C PC
Sbjct: 54 CTCNPDGARSLYCNKVTGQCECPRGVTGLNCDRCDRGTYGALPQCIPC 101
Score = 37.4 bits (85), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Query: 11 PCQCDIDGSKSFECEQFGGQCQCKPNVIGRRCEMCATGYYGFP--DCHPCNC 60
PC+CD GS+ +C + GQC C GR C C +G P C C C
Sbjct: 5 PCECDKSGSRLEQCNLYDGQCDCVDGRGGRDCSQCPEMSWGDPFLGCKSCTC 56
>sp|A2ASQ1|AGRIN_MOUSE Agrin OS=Mus musculus GN=Agrn PE=1 SV=1
Length = 1950
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 33/65 (50%), Gaps = 9/65 (13%)
Query: 12 CQCDIDGSKSFECEQFGGQCQCKPNVIGRRCEMCATGYYGF--------PDCHPCNC-PF 62
C C+ GS S C+ GQC C+P V G RC+ C G++ F C PC+C P
Sbjct: 688 CHCNPHGSYSGTCDPVTGQCSCRPGVGGLRCDRCEPGFWNFRGIVTDGHSGCTPCSCDPR 747
Query: 63 TAVCD 67
AV D
Sbjct: 748 GAVRD 752
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 40/92 (43%), Gaps = 12/92 (13%)
Query: 11 PCQCDIDGSKSFECEQFGGQCQCKPNVIGRRCEMC----ATGYYGFP-------DCHPCN 59
PC CD G+ +CEQ G C C+P V G +C C A G+ G C +
Sbjct: 741 PCSCDPRGAVRDDCEQMTGLCSCRPGVAGPKCGQCPDGQALGHLGCEADPTTPVTCVEMH 800
Query: 60 CPFTAVCDSYTGKLAQVLIQVVTFPNYPSCKL 91
C F A C G AQ + +T P S K+
Sbjct: 801 CEFGASCVEEAG-FAQCVCPTLTCPEANSTKV 831
>sp|P25304|AGRIN_RAT Agrin OS=Rattus norvegicus GN=Agrn PE=1 SV=2
Length = 1959
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 33/65 (50%), Gaps = 9/65 (13%)
Query: 12 CQCDIDGSKSFECEQFGGQCQCKPNVIGRRCEMCATGYYGF--------PDCHPCNC-PF 62
C C+ GS S C+ GQC C+P V G RC+ C G++ F C PC+C P
Sbjct: 688 CHCNPHGSYSGTCDPATGQCSCRPGVGGLRCDRCEPGFWNFRGIVTDGHSGCTPCSCDPR 747
Query: 63 TAVCD 67
AV D
Sbjct: 748 GAVRD 752
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 21/38 (55%)
Query: 11 PCQCDIDGSKSFECEQFGGQCQCKPNVIGRRCEMCATG 48
PC CD G+ +CEQ G C C+P V G +C C G
Sbjct: 741 PCSCDPRGAVRDDCEQMTGLCSCRPGVAGPKCGQCPDG 778
>sp|O00468|AGRIN_HUMAN Agrin OS=Homo sapiens GN=AGRN PE=1 SV=5
Length = 2067
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 33/65 (50%), Gaps = 9/65 (13%)
Query: 12 CQCDIDGSKSFECEQFGGQCQCKPNVIGRRCEMCATGYYGF--------PDCHPCNC-PF 62
CQC+ GS C+ GQC C+P V G RC+ C G++ F C PC+C P
Sbjct: 793 CQCNPHGSYGGTCDPATGQCSCRPGVGGLRCDRCEPGFWNFRGIVTDGRSGCTPCSCDPQ 852
Query: 63 TAVCD 67
AV D
Sbjct: 853 GAVRD 857
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 21/38 (55%)
Query: 11 PCQCDIDGSKSFECEQFGGQCQCKPNVIGRRCEMCATG 48
PC CD G+ +CEQ G C CKP V G +C C G
Sbjct: 846 PCSCDPQGAVRDDCEQMTGLCSCKPGVAGPKCGQCPDG 883
>sp|P31696|AGRIN_CHICK Agrin OS=Gallus gallus GN=AGRN PE=1 SV=3
Length = 2081
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 33/65 (50%), Gaps = 9/65 (13%)
Query: 12 CQCDIDGSKSFECEQFGGQCQCKPNVIGRRCEMCATGYYGF--------PDCHPCNC-PF 62
CQC+ GS C+ GQC CKP V G +C+ C G++ F C PCNC P
Sbjct: 793 CQCNPYGSYGGTCDPATGQCSCKPGVGGLKCDRCEPGFWNFRGIVTDSKSGCTPCNCDPV 852
Query: 63 TAVCD 67
+V D
Sbjct: 853 GSVRD 857
Score = 37.4 bits (85), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 20/38 (52%)
Query: 11 PCQCDIDGSKSFECEQFGGQCQCKPNVIGRRCEMCATG 48
PC CD GS +CEQ G C CK + G +C C G
Sbjct: 846 PCNCDPVGSVRDDCEQMTGLCSCKTGITGMKCNQCPNG 883
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.328 0.142 0.524
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 37,831,558
Number of Sequences: 539616
Number of extensions: 1358908
Number of successful extensions: 5023
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 109
Number of HSP's successfully gapped in prelim test: 69
Number of HSP's that attempted gapping in prelim test: 3716
Number of HSP's gapped (non-prelim): 1178
length of query: 95
length of database: 191,569,459
effective HSP length: 65
effective length of query: 30
effective length of database: 156,494,419
effective search space: 4694832570
effective search space used: 4694832570
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 55 (25.8 bits)