RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy4724
(1650 letters)
>d1v63a_ a.21.1.1 (A:) Nucleolar transcription factor 1 (Upstream
binding factor 1, UBF-1) {Mouse (Mus musculus) [TaxId:
10090]}
Length = 101
Score = 41.4 bits (97), Expect = 7e-05
Identities = 8/47 (17%), Positives = 21/47 (44%)
Query: 1584 KKKKKKKKKKKKKKKKKKKKKKKYKKKKKKKKKKKKKKKKKKKKKKK 1630
+K+ KK ++++++ K + K + + K+ K+K
Sbjct: 51 SQKEHYKKLAEEQQRQYKVHLDLWVKSLSPQDRAAYKEYISNKRKSG 97
Score = 39.1 bits (91), Expect = 5e-04
Identities = 13/91 (14%), Positives = 28/91 (30%), Gaps = 12/91 (13%)
Query: 1555 ASKSYPSLKPLGSYIVDLLARREGRGEKKKKKKKKKKK------------KKKKKKKKKK 1602
+ S P P+ Y K++ + K+ KK ++
Sbjct: 3 SGSSGPKKPPMNGYQKFSQELLSNGELNHLPLKERMVEIGSRWQRISQSQKEHYKKLAEE 62
Query: 1603 KKKKYKKKKKKKKKKKKKKKKKKKKKKKKKK 1633
++++YK K + + K+ K
Sbjct: 63 QQRQYKVHLDLWVKSLSPQDRAAYKEYISNK 93
Score = 38.3 bits (89), Expect = 8e-04
Identities = 7/48 (14%), Positives = 20/48 (41%)
Query: 1581 EKKKKKKKKKKKKKKKKKKKKKKKKKYKKKKKKKKKKKKKKKKKKKKK 1628
+ +K+ KK ++++++ K + + K+ K+K
Sbjct: 50 QSQKEHYKKLAEEQQRQYKVHLDLWVKSLSPQDRAAYKEYISNKRKSG 97
Score = 37.9 bits (88), Expect = 0.001
Identities = 8/47 (17%), Positives = 20/47 (42%)
Query: 1587 KKKKKKKKKKKKKKKKKKKKYKKKKKKKKKKKKKKKKKKKKKKKKKK 1633
+K+ KK ++++++ K K + + K+ K+K
Sbjct: 51 SQKEHYKKLAEEQQRQYKVHLDLWVKSLSPQDRAAYKEYISNKRKSG 97
>d1zroa1 a.264.1.1 (A:8-282) Erythrocyte binding antigen region II
{Plasmodium falciparum [TaxId: 5833]}
Length = 275
Score = 42.7 bits (100), Expect = 2e-04
Identities = 10/54 (18%), Positives = 19/54 (35%)
Query: 1581 EKKKKKKKKKKKKKKKKKKKKKKKKKYKKKKKKKKKKKKKKKKKKKKKKKKKKY 1634
+ K + K+ + +K K+ + Y K + K K + KY
Sbjct: 220 IRSKFEWHTLSKEYETQKVPKENAENYLIKISENKNDAKVSLLLNNCDAEYSKY 273
Score = 42.3 bits (99), Expect = 3e-04
Identities = 10/55 (18%), Positives = 19/55 (34%)
Query: 1580 GEKKKKKKKKKKKKKKKKKKKKKKKKKYKKKKKKKKKKKKKKKKKKKKKKKKKKY 1634
E K + + K + K+Y+ +K K+ + K + K K
Sbjct: 206 KECIDPCMKYRDWIIRSKFEWHTLSKEYETQKVPKENAENYLIKISENKNDAKVS 260
Score = 41.9 bits (98), Expect = 3e-04
Identities = 10/55 (18%), Positives = 22/55 (40%)
Query: 1581 EKKKKKKKKKKKKKKKKKKKKKKKKKYKKKKKKKKKKKKKKKKKKKKKKKKKKYS 1635
+ K K K + +K+ KY+ + K + K+ + +K K+ +
Sbjct: 189 KLPKSKCKNNALYEACEKECIDPCMKYRDWIIRSKFEWHTLSKEYETQKVPKENA 243
Score = 41.9 bits (98), Expect = 4e-04
Identities = 9/52 (17%), Positives = 18/52 (34%)
Query: 1584 KKKKKKKKKKKKKKKKKKKKKKKYKKKKKKKKKKKKKKKKKKKKKKKKKKYS 1635
+ K + K+ + +K K+ + K + K K +YS
Sbjct: 220 IRSKFEWHTLSKEYETQKVPKENAENYLIKISENKNDAKVSLLLNNCDAEYS 271
Score = 41.2 bits (96), Expect = 7e-04
Identities = 7/57 (12%), Positives = 21/57 (36%)
Query: 1577 EGRGEKKKKKKKKKKKKKKKKKKKKKKKKKYKKKKKKKKKKKKKKKKKKKKKKKKKK 1633
+ + +K+ K + + K ++ K+ + +K K+ + K +
Sbjct: 196 KNNALYEACEKECIDPCMKYRDWIIRSKFEWHTLSKEYETQKVPKENAENYLIKISE 252
Score = 39.2 bits (91), Expect = 0.003
Identities = 7/53 (13%), Positives = 15/53 (28%)
Query: 1581 EKKKKKKKKKKKKKKKKKKKKKKKKKYKKKKKKKKKKKKKKKKKKKKKKKKKK 1633
+ K + K+ + +K K+ + K + K K
Sbjct: 216 RDWIIRSKFEWHTLSKEYETQKVPKENAENYLIKISENKNDAKVSLLLNNCDA 268
Score = 38.9 bits (90), Expect = 0.003
Identities = 8/55 (14%), Positives = 20/55 (36%)
Query: 1581 EKKKKKKKKKKKKKKKKKKKKKKKKKYKKKKKKKKKKKKKKKKKKKKKKKKKKYS 1635
+K+ K + + K + K+ + +K K+ + K + K +
Sbjct: 203 ACEKECIDPCMKYRDWIIRSKFEWHTLSKEYETQKVPKENAENYLIKISENKNDA 257
Score = 38.1 bits (88), Expect = 0.006
Identities = 6/52 (11%), Positives = 15/52 (28%)
Query: 1583 KKKKKKKKKKKKKKKKKKKKKKKKYKKKKKKKKKKKKKKKKKKKKKKKKKKY 1634
+ + K + K+ + +K + + K + K K
Sbjct: 216 RDWIIRSKFEWHTLSKEYETQKVPKENAENYLIKISENKNDAKVSLLLNNCD 267
Score = 36.5 bits (84), Expect = 0.018
Identities = 7/50 (14%), Positives = 16/50 (32%)
Query: 1583 KKKKKKKKKKKKKKKKKKKKKKKKYKKKKKKKKKKKKKKKKKKKKKKKKK 1632
K + + K + K+ + + K+ + K + K K
Sbjct: 213 MKYRDWIIRSKFEWHTLSKEYETQKVPKENAENYLIKISENKNDAKVSLL 262
Score = 36.5 bits (84), Expect = 0.018
Identities = 8/53 (15%), Positives = 17/53 (32%)
Query: 1582 KKKKKKKKKKKKKKKKKKKKKKKKKYKKKKKKKKKKKKKKKKKKKKKKKKKKY 1634
K + + K + K+ + +K K+ + K + K K
Sbjct: 213 MKYRDWIIRSKFEWHTLSKEYETQKVPKENAENYLIKISENKNDAKVSLLLNN 265
Score = 36.2 bits (83), Expect = 0.028
Identities = 8/55 (14%), Positives = 19/55 (34%)
Query: 1583 KKKKKKKKKKKKKKKKKKKKKKKKYKKKKKKKKKKKKKKKKKKKKKKKKKKYSRE 1637
++ + K K K K + + + K + + K + K+Y +
Sbjct: 182 LERDNRAKLPKSKCKNNALYEACEKECIDPCMKYRDWIIRSKFEWHTLSKEYETQ 236
Score = 35.8 bits (82), Expect = 0.033
Identities = 9/57 (15%), Positives = 18/57 (31%)
Query: 1581 EKKKKKKKKKKKKKKKKKKKKKKKKKYKKKKKKKKKKKKKKKKKKKKKKKKKKYSRE 1637
K + + K + K+ + +K K+ + K + K K E
Sbjct: 213 MKYRDWIIRSKFEWHTLSKEYETQKVPKENAENYLIKISENKNDAKVSLLLNNCDAE 269
Score = 35.4 bits (81), Expect = 0.047
Identities = 10/58 (17%), Positives = 20/58 (34%), Gaps = 1/58 (1%)
Query: 1579 RGEKKKKKKKKKKKKKKKKKKKKKKKKKYKKKKKKKKKKKKK-KKKKKKKKKKKKKYS 1635
R + K K K K + +K+ K + + K + K+ + +K
Sbjct: 184 RDNRAKLPKSKCKNNALYEACEKECIDPCMKYRDWIIRSKFEWHTLSKEYETQKVPKE 241
Score = 34.6 bits (79), Expect = 0.079
Identities = 8/57 (14%), Positives = 18/57 (31%)
Query: 1579 RGEKKKKKKKKKKKKKKKKKKKKKKKKKYKKKKKKKKKKKKKKKKKKKKKKKKKKYS 1635
+ K K K K + +K+ K + + K + K+ + +
Sbjct: 182 LERDNRAKLPKSKCKNNALYEACEKECIDPCMKYRDWIIRSKFEWHTLSKEYETQKV 238
Score = 29.6 bits (66), Expect = 3.3
Identities = 8/47 (17%), Positives = 18/47 (38%)
Query: 1588 KKKKKKKKKKKKKKKKKKKYKKKKKKKKKKKKKKKKKKKKKKKKKKY 1634
K + K ++ +K + + K K +KK + ++K
Sbjct: 98 NDMDFGGYSTKAENKIQEVFKGAHGEISEHKIKNFRKKWWNEFREKL 144
Score = 29.2 bits (65), Expect = 4.1
Identities = 9/48 (18%), Positives = 18/48 (37%)
Query: 1579 RGEKKKKKKKKKKKKKKKKKKKKKKKKKYKKKKKKKKKKKKKKKKKKK 1626
G K + K ++ K + + K K +KK + ++K
Sbjct: 96 MGNDMDFGGYSTKAENKIQEVFKGAHGEISEHKIKNFRKKWWNEFREK 143
Score = 28.8 bits (64), Expect = 4.6
Identities = 8/46 (17%), Positives = 18/46 (39%)
Query: 1584 KKKKKKKKKKKKKKKKKKKKKKKYKKKKKKKKKKKKKKKKKKKKKK 1629
K + K ++ K + + + K K +KK + ++K
Sbjct: 98 NDMDFGGYSTKAENKIQEVFKGAHGEISEHKIKNFRKKWWNEFREK 143
>d1v64a_ a.21.1.1 (A:) Nucleolar transcription factor 1 (Upstream
binding factor 1, UBF-1) {Mouse (Mus musculus) [TaxId:
10090]}
Length = 108
Score = 39.5 bits (92), Expect = 4e-04
Identities = 8/48 (16%), Positives = 23/48 (47%)
Query: 1584 KKKKKKKKKKKKKKKKKKKKKKKYKKKKKKKKKKKKKKKKKKKKKKKK 1631
K+K KK +KKK + + ++ + ++++++ ++K
Sbjct: 58 KEKDAYHKKCDQKKKDYEVELLRFLESLPEEEQQRVLGEEKMLNISGP 105
Score = 39.5 bits (92), Expect = 4e-04
Identities = 14/92 (15%), Positives = 33/92 (35%), Gaps = 10/92 (10%)
Query: 1560 PSLKPLGSYIVDLLARREGRGEKKKKKKKKK----------KKKKKKKKKKKKKKKKYKK 1609
P+ P SY + + ++ K+K KK +KKK Y+
Sbjct: 17 PTKPPPNSYSLYCAELMANMKDVPSTERMVLCSQQWKLLSQKEKDAYHKKCDQKKKDYEV 76
Query: 1610 KKKKKKKKKKKKKKKKKKKKKKKKYSREGGGG 1641
+ + + ++++++ ++K G
Sbjct: 77 ELLRFLESLPEEEQQRVLGEEKMLNISGPSSG 108
Score = 32.2 bits (73), Expect = 0.14
Identities = 9/66 (13%), Positives = 20/66 (30%), Gaps = 8/66 (12%)
Query: 1580 GEKKKKKKKKKKKKKKKKKKK--------KKKKKKYKKKKKKKKKKKKKKKKKKKKKKKK 1631
G + K K + K + K ++ ++ K +K+K
Sbjct: 1 GSSGSSGQLKDKFDGRPTKPPPNSYSLYCAELMANMKDVPSTERMVLCSQQWKLLSQKEK 60
Query: 1632 KKYSRE 1637
Y ++
Sbjct: 61 DAYHKK 66
>d2lefa_ a.21.1.1 (A:) Lymphoid enhancer-binding factor, LEF1 {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 86
Score = 38.7 bits (90), Expect = 4e-04
Identities = 8/45 (17%), Positives = 23/45 (51%)
Query: 1579 RGEKKKKKKKKKKKKKKKKKKKKKKKKKYKKKKKKKKKKKKKKKK 1623
++++ K + +K+++ + + + KKKK+K++K
Sbjct: 42 HALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKKRKREK 86
Score = 37.2 bits (86), Expect = 0.002
Identities = 8/40 (20%), Positives = 22/40 (55%)
Query: 1591 KKKKKKKKKKKKKKKKYKKKKKKKKKKKKKKKKKKKKKKK 1630
+++ K + +K+++ + + + KKKK+K++K
Sbjct: 47 EEQAKYYELARKERQLHMQLYPGWSARDNYGKKKKRKREK 86
Score = 36.4 bits (84), Expect = 0.002
Identities = 11/49 (22%), Positives = 25/49 (51%)
Query: 1578 GRGEKKKKKKKKKKKKKKKKKKKKKKKKKYKKKKKKKKKKKKKKKKKKK 1626
GR ++++ K + +K+++ + Y + KKKK+K++K
Sbjct: 38 GRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKKRKREK 86
Score = 32.1 bits (73), Expect = 0.071
Identities = 16/85 (18%), Positives = 36/85 (42%), Gaps = 17/85 (20%)
Query: 1563 KPLGSYIVDLLARREGRGEKKKKKKKKKKKKKKK------KKKKKKKKKKYKKKKKKKKK 1616
KPL +++ L +E R + K+ + ++++ KY + +K+++
Sbjct: 5 KPLNAFM---LYMKEMRANVVAESTLKESAAINQILGRRWHALSREEQAKYYELARKERQ 61
Query: 1617 K--------KKKKKKKKKKKKKKKK 1633
+ KKKK+K++K
Sbjct: 62 LHMQLYPGWSARDNYGKKKKRKREK 86
>d1zroa2 a.264.1.1 (A:283-596) Erythrocyte binding antigen region II
{Plasmodium falciparum [TaxId: 5833]}
Length = 314
Score = 41.6 bits (97), Expect = 6e-04
Identities = 15/66 (22%), Positives = 30/66 (45%)
Query: 1579 RGEKKKKKKKKKKKKKKKKKKKKKKKKKYKKKKKKKKKKKKKKKKKKKKKKKKKKYSREG 1638
+ + + K + K+K + K+K YK+ KKK++ K+ K+ ++ +K Y
Sbjct: 215 KTKMIETLKVECKEKPCEDDNCKRKCNSYKEWISKKKEEYNKQAKQYQEYQKGNNYKMYS 274
Query: 1639 GGGGEK 1644
K
Sbjct: 275 EFKSIK 280
Score = 38.9 bits (90), Expect = 0.004
Identities = 10/52 (19%), Positives = 20/52 (38%)
Query: 1583 KKKKKKKKKKKKKKKKKKKKKKKKYKKKKKKKKKKKKKKKKKKKKKKKKKKY 1634
K+ ++ +K K + K K KK +K + + K++ Y
Sbjct: 258 AKQYQEYQKGNNYKMYSEFKSIKPEVYLKKYSEKCSNLNFEDEFKEELHSDY 309
Score = 38.9 bits (90), Expect = 0.004
Identities = 12/54 (22%), Positives = 25/54 (46%)
Query: 1581 EKKKKKKKKKKKKKKKKKKKKKKKKKYKKKKKKKKKKKKKKKKKKKKKKKKKKY 1634
KKK++ K+ K+ ++ +K K + K K + KK +K + ++
Sbjct: 248 SKKKEEYNKQAKQYQEYQKGNNYKMYSEFKSIKPEVYLKKYSEKCSNLNFEDEF 301
Score = 38.9 bits (90), Expect = 0.004
Identities = 10/53 (18%), Positives = 22/53 (41%)
Query: 1581 EKKKKKKKKKKKKKKKKKKKKKKKKKYKKKKKKKKKKKKKKKKKKKKKKKKKK 1633
K+ K+ ++ +K K + K K + KK +K + + K++
Sbjct: 255 NKQAKQYQEYQKGNNYKMYSEFKSIKPEVYLKKYSEKCSNLNFEDEFKEELHS 307
Score = 38.9 bits (90), Expect = 0.004
Identities = 17/55 (30%), Positives = 29/55 (52%)
Query: 1583 KKKKKKKKKKKKKKKKKKKKKKKKYKKKKKKKKKKKKKKKKKKKKKKKKKKYSRE 1637
K+K K+ KKK++ K+ K+Y++ +K K + K K + KKYS +
Sbjct: 237 KRKCNSYKEWISKKKEEYNKQAKQYQEYQKGNNYKMYSEFKSIKPEVYLKKYSEK 291
Score = 38.9 bits (90), Expect = 0.004
Identities = 13/54 (24%), Positives = 26/54 (48%)
Query: 1581 EKKKKKKKKKKKKKKKKKKKKKKKKKYKKKKKKKKKKKKKKKKKKKKKKKKKKY 1634
++ KKK++ K+ K+ ++ +K YK + K K + KK +K +
Sbjct: 244 KEWISKKKEEYNKQAKQYQEYQKGNNYKMYSEFKSIKPEVYLKKYSEKCSNLNF 297
Score = 36.6 bits (84), Expect = 0.020
Identities = 16/68 (23%), Positives = 28/68 (41%)
Query: 1583 KKKKKKKKKKKKKKKKKKKKKKKKYKKKKKKKKKKKKKKKKKKKKKKKKKKYSREGGGGG 1642
K+ KKK++ K+ K+ ++ K K + K K + KK +K S
Sbjct: 241 NSYKEWISKKKEEYNKQAKQYQEYQKGNNYKMYSEFKSIKPEVYLKKYSEKCSNLNFEDE 300
Query: 1643 EKELVQKN 1650
KE + +
Sbjct: 301 FKEELHSD 308
Score = 36.6 bits (84), Expect = 0.022
Identities = 11/51 (21%), Positives = 21/51 (41%)
Query: 1581 EKKKKKKKKKKKKKKKKKKKKKKKKKYKKKKKKKKKKKKKKKKKKKKKKKK 1631
++ +K K + K K + KKY +K + + K++ K K
Sbjct: 262 QEYQKGNNYKMYSEFKSIKPEVYLKKYSEKCSNLNFEDEFKEELHSDYKNK 312
Score = 36.2 bits (83), Expect = 0.030
Identities = 13/54 (24%), Positives = 24/54 (44%)
Query: 1582 KKKKKKKKKKKKKKKKKKKKKKKKKYKKKKKKKKKKKKKKKKKKKKKKKKKKYS 1635
K+ KKK++ K+ K+ ++ +K K + K K + KK +K
Sbjct: 244 KEWISKKKEEYNKQAKQYQEYQKGNNYKMYSEFKSIKPEVYLKKYSEKCSNLNF 297
Score = 35.8 bits (82), Expect = 0.034
Identities = 13/56 (23%), Positives = 26/56 (46%)
Query: 1582 KKKKKKKKKKKKKKKKKKKKKKKKKYKKKKKKKKKKKKKKKKKKKKKKKKKKYSRE 1637
+ K+K K+ KKK++ K K+ ++ +K K + K K + Y ++
Sbjct: 232 EDDNCKRKCNSYKEWISKKKEEYNKQAKQYQEYQKGNNYKMYSEFKSIKPEVYLKK 287
Score = 33.9 bits (77), Expect = 0.16
Identities = 13/53 (24%), Positives = 24/53 (45%)
Query: 1581 EKKKKKKKKKKKKKKKKKKKKKKKKKYKKKKKKKKKKKKKKKKKKKKKKKKKK 1633
K+ KKK++ K+ K+ ++ +K K + K K + KK +K
Sbjct: 241 NSYKEWISKKKEEYNKQAKQYQEYQKGNNYKMYSEFKSIKPEVYLKKYSEKCS 293
>d2c6ja1 a.264.1.1 (A:15-308) Duffy receptor, alpha form {Plasmodium
knowlesi [TaxId: 5850]}
Length = 294
Score = 41.2 bits (96), Expect = 8e-04
Identities = 15/69 (21%), Positives = 20/69 (28%)
Query: 1581 EKKKKKKKKKKKKKKKKKKKKKKKKKYKKKKKKKKKKKKKKKKKKKKKKKKKKYSREGGG 1640
EK K K Y + +KKK+ K KK +K E
Sbjct: 198 EKCASKLYYNNMAICMLPLCHDACKSYDQWITRKKKQWDVLSTKFSSVKKTQKIGTENIA 257
Query: 1641 GGEKELVQK 1649
L Q+
Sbjct: 258 TAYDILKQE 266
Score = 40.4 bits (94), Expect = 0.001
Identities = 7/55 (12%), Positives = 16/55 (29%)
Query: 1581 EKKKKKKKKKKKKKKKKKKKKKKKKKYKKKKKKKKKKKKKKKKKKKKKKKKKKYS 1635
+ K KK +K + K++ K+ + + K+
Sbjct: 236 DVLSTKFSSVKKTQKIGTENIATAYDILKQELNGFKEATFENEINKRDNLYNHLC 290
Score = 39.6 bits (92), Expect = 0.002
Identities = 10/57 (17%), Positives = 20/57 (35%)
Query: 1583 KKKKKKKKKKKKKKKKKKKKKKKKYKKKKKKKKKKKKKKKKKKKKKKKKKKYSREGG 1639
+KKK+ K KK +K + K++ K+ + + R+
Sbjct: 229 TRKKKQWDVLSTKFSSVKKTQKIGTENIATAYDILKQELNGFKEATFENEINKRDNL 285
Score = 38.1 bits (88), Expect = 0.006
Identities = 8/57 (14%), Positives = 18/57 (31%)
Query: 1579 RGEKKKKKKKKKKKKKKKKKKKKKKKKKYKKKKKKKKKKKKKKKKKKKKKKKKKKYS 1635
+ + K KK +K + Y K++ K+ + + K+
Sbjct: 232 KKQWDVLSTKFSSVKKTQKIGTENIATAYDILKQELNGFKEATFENEINKRDNLYNH 288
Score = 38.1 bits (88), Expect = 0.006
Identities = 10/54 (18%), Positives = 19/54 (35%)
Query: 1581 EKKKKKKKKKKKKKKKKKKKKKKKKKYKKKKKKKKKKKKKKKKKKKKKKKKKKY 1634
+KKK+ K KK +K + K++ K+ + + K
Sbjct: 229 TRKKKQWDVLSTKFSSVKKTQKIGTENIATAYDILKQELNGFKEATFENEINKR 282
Score = 37.3 bits (86), Expect = 0.012
Identities = 11/61 (18%), Positives = 21/61 (34%), Gaps = 6/61 (9%)
Query: 1583 KKKKKKKKKKKKKKKKKKKKKKKKYKKKKKKKKKKKKKKK------KKKKKKKKKKKYSR 1636
K + +KKK+ K+ KK +K + K++ K+ +
Sbjct: 218 HDACKSYDQWITRKKKQWDVLSTKFSSVKKTQKIGTENIATAYDILKQELNGFKEATFEN 277
Query: 1637 E 1637
E
Sbjct: 278 E 278
Score = 36.5 bits (84), Expect = 0.020
Identities = 8/55 (14%), Positives = 14/55 (25%)
Query: 1580 GEKKKKKKKKKKKKKKKKKKKKKKKKKYKKKKKKKKKKKKKKKKKKKKKKKKKKY 1634
K + +KKK++ K KK +K +
Sbjct: 208 NMAICMLPLCHDACKSYDQWITRKKKQWDVLSTKFSSVKKTQKIGTENIATAYDI 262
Score = 35.0 bits (80), Expect = 0.059
Identities = 8/52 (15%), Positives = 17/52 (32%)
Query: 1582 KKKKKKKKKKKKKKKKKKKKKKKKKYKKKKKKKKKKKKKKKKKKKKKKKKKK 1633
+ +KKK+ K KK + + K++ K+ +
Sbjct: 225 DQWITRKKKQWDVLSTKFSSVKKTQKIGTENIATAYDILKQELNGFKEATFE 276
Score = 33.5 bits (76), Expect = 0.19
Identities = 9/55 (16%), Positives = 16/55 (29%)
Query: 1581 EKKKKKKKKKKKKKKKKKKKKKKKKKYKKKKKKKKKKKKKKKKKKKKKKKKKKYS 1635
K + +KKK+ K KK +K + K++
Sbjct: 218 HDACKSYDQWITRKKKQWDVLSTKFSSVKKTQKIGTENIATAYDILKQELNGFKE 272
Score = 32.7 bits (74), Expect = 0.32
Identities = 8/56 (14%), Positives = 13/56 (23%)
Query: 1576 REGRGEKKKKKKKKKKKKKKKKKKKKKKKKKYKKKKKKKKKKKKKKKKKKKKKKKK 1631
+ K + +KKK K KK +K +
Sbjct: 203 KLYYNNMAICMLPLCHDACKSYDQWITRKKKQWDVLSTKFSSVKKTQKIGTENIAT 258
>d1vqob1 b.43.3.2 (B:1-337) Ribosomal protein L3 {Archaeon Haloarcula
marismortui [TaxId: 2238]}
Length = 337
Score = 38.9 bits (90), Expect = 0.004
Identities = 4/61 (6%), Positives = 13/61 (21%)
Query: 1577 EGRGEKKKKKKKKKKKKKKKKKKKKKKKKKYKKKKKKKKKKKKKKKKKKKKKKKKKKYSR 1636
+ + + + +++ + + KKK
Sbjct: 103 DEFHSELDRTLDVPEDHDPDAAEEQIRDAHEAGDLGDLRLITHTVPDAVPSVPKKKPDVM 162
Query: 1637 E 1637
E
Sbjct: 163 E 163
Score = 37.3 bits (86), Expect = 0.013
Identities = 7/63 (11%), Positives = 15/63 (23%)
Query: 1581 EKKKKKKKKKKKKKKKKKKKKKKKKKYKKKKKKKKKKKKKKKKKKKKKKKKKKYSREGGG 1640
E + + +++ + + + KKK G
Sbjct: 108 ELDRTLDVPEDHDPDAAEEQIRDAHEAGDLGDLRLITHTVPDAVPSVPKKKPDVMETRVG 167
Query: 1641 GGE 1643
GG
Sbjct: 168 GGS 170
Score = 36.6 bits (84), Expect = 0.024
Identities = 7/66 (10%), Positives = 15/66 (22%)
Query: 1561 SLKPLGSYIVDLLARREGRGEKKKKKKKKKKKKKKKKKKKKKKKKKYKKKKKKKKKKKKK 1620
+PL D R + +++ + + +
Sbjct: 93 GQRPLTEVWTDEFHSELDRTLDVPEDHDPDAAEEQIRDAHEAGDLGDLRLITHTVPDAVP 152
Query: 1621 KKKKKK 1626
KKK
Sbjct: 153 SVPKKK 158
Score = 34.6 bits (79), Expect = 0.093
Identities = 6/74 (8%), Positives = 16/74 (21%)
Query: 1574 ARREGRGEKKKKKKKKKKKKKKKKKKKKKKKKKYKKKKKKKKKKKKKKKKKKKKKKKKKK 1633
+ + +++ + + + KKK
Sbjct: 102 TDEFHSELDRTLDVPEDHDPDAAEEQIRDAHEAGDLGDLRLITHTVPDAVPSVPKKKPDV 161
Query: 1634 YSREGGGGGEKELV 1647
GGG + +
Sbjct: 162 METRVGGGSVSDRL 175
>d1y2oa1 a.238.1.3 (A:1-248) BAP2/IRSp53 N-terminal domain {Human
(Homo sapiens) [TaxId: 9606]}
Length = 248
Score = 38.1 bits (88), Expect = 0.005
Identities = 12/52 (23%), Positives = 24/52 (46%)
Query: 1583 KKKKKKKKKKKKKKKKKKKKKKKKYKKKKKKKKKKKKKKKKKKKKKKKKKKY 1634
+ KK + +++ K K + + KK +KK + K +K K+ +Y
Sbjct: 113 SRYLSAALKKYQTEQRSKGDALDKCQAELKKLRKKSQGSKNPQKYSDKELQY 164
Score = 38.1 bits (88), Expect = 0.006
Identities = 11/51 (21%), Positives = 22/51 (43%)
Query: 1583 KKKKKKKKKKKKKKKKKKKKKKKKYKKKKKKKKKKKKKKKKKKKKKKKKKK 1633
+ + KK + +++ K K + + KK +KK + K +K K
Sbjct: 110 ELDSRYLSAALKKYQTEQRSKGDALDKCQAELKKLRKKSQGSKNPQKYSDK 160
Score = 37.7 bits (87), Expect = 0.008
Identities = 12/55 (21%), Positives = 26/55 (47%)
Query: 1583 KKKKKKKKKKKKKKKKKKKKKKKKYKKKKKKKKKKKKKKKKKKKKKKKKKKYSRE 1637
++K + + KK + +++ K + + KK +KK + K +KYS +
Sbjct: 106 EQKVELDSRYLSAALKKYQTEQRSKGDALDKCQAELKKLRKKSQGSKNPQKYSDK 160
Score = 37.7 bits (87), Expect = 0.008
Identities = 11/52 (21%), Positives = 23/52 (44%)
Query: 1581 EKKKKKKKKKKKKKKKKKKKKKKKKKYKKKKKKKKKKKKKKKKKKKKKKKKK 1632
+ + KK + +++ K K + KK +KK + K +K K+ +
Sbjct: 112 DSRYLSAALKKYQTEQRSKGDALDKCQAELKKLRKKSQGSKNPQKYSDKELQ 163
Score = 37.3 bits (86), Expect = 0.009
Identities = 12/56 (21%), Positives = 26/56 (46%)
Query: 1582 KKKKKKKKKKKKKKKKKKKKKKKKKYKKKKKKKKKKKKKKKKKKKKKKKKKKYSRE 1637
++K + + KK + +++ K K + + KK +KK + K +K +E
Sbjct: 106 EQKVELDSRYLSAALKKYQTEQRSKGDALDKCQAELKKLRKKSQGSKNPQKYSDKE 161
Score = 36.9 bits (85), Expect = 0.014
Identities = 12/57 (21%), Positives = 24/57 (42%)
Query: 1581 EKKKKKKKKKKKKKKKKKKKKKKKKKYKKKKKKKKKKKKKKKKKKKKKKKKKKYSRE 1637
E+K + + KK + +++ K K + + KK +KK + K +K
Sbjct: 106 EQKVELDSRYLSAALKKYQTEQRSKGDALDKCQAELKKLRKKSQGSKNPQKYSDKEL 162
Score = 35.8 bits (82), Expect = 0.031
Identities = 11/50 (22%), Positives = 22/50 (44%)
Query: 1580 GEKKKKKKKKKKKKKKKKKKKKKKKKKYKKKKKKKKKKKKKKKKKKKKKK 1629
KK + +++ K K + + KK +KK + K +K K+ +
Sbjct: 114 RYLSAALKKYQTEQRSKGDALDKCQAELKKLRKKSQGSKNPQKYSDKELQ 163
Score = 35.4 bits (81), Expect = 0.038
Identities = 14/61 (22%), Positives = 29/61 (47%)
Query: 1590 KKKKKKKKKKKKKKKKKYKKKKKKKKKKKKKKKKKKKKKKKKKKYSREGGGGGEKELVQK 1649
++K + + KKY+ +++ K K + + KK +KK + S+ +KEL
Sbjct: 106 EQKVELDSRYLSAALKKYQTEQRSKGDALDKCQAELKKLRKKSQGSKNPQKYSDKELQYI 165
Query: 1650 N 1650
+
Sbjct: 166 D 166
Score = 33.8 bits (77), Expect = 0.13
Identities = 13/64 (20%), Positives = 25/64 (39%)
Query: 1567 SYIVDLLARREGRGEKKKKKKKKKKKKKKKKKKKKKKKKKYKKKKKKKKKKKKKKKKKKK 1626
+ L + E KK + +++ K K + KK +KK + K +K
Sbjct: 100 ELLTQLEQKVELDSRYLSAALKKYQTEQRSKGDALDKCQAELKKLRKKSQGSKNPQKYSD 159
Query: 1627 KKKK 1630
K+ +
Sbjct: 160 KELQ 163
Score = 33.1 bits (75), Expect = 0.22
Identities = 10/56 (17%), Positives = 24/56 (42%)
Query: 1582 KKKKKKKKKKKKKKKKKKKKKKKKKYKKKKKKKKKKKKKKKKKKKKKKKKKKYSRE 1637
KK + +++ K K + + K +KK + K +K K+ + +++
Sbjct: 117 SAALKKYQTEQRSKGDALDKCQAELKKLRKKSQGSKNPQKYSDKELQYIDAISNKQ 172
>d1k4ta3 e.15.1.1 (A:201-430) Eukaryotic DNA topoisomerase I,
N-terminal DNA-binding fragment {Human (Homo sapiens)
[TaxId: 9606]}
Length = 230
Score = 38.2 bits (89), Expect = 0.005
Identities = 13/56 (23%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
Query: 1582 KKKKKKKKKKKKKKKKKKKKKKKKKYKKKKKKKKK---KKKKKKKKKKKKKKKKKY 1634
+K+ ++K K + +Y K + + +K K++K K K++ +K K+Y
Sbjct: 83 RKEMTNEEKNIITNLSKCDFTQMSQYFKAQTEARKQMSKEEKLKIKEENEKLLKEY 138
Score = 34.3 bits (79), Expect = 0.088
Identities = 10/50 (20%), Positives = 23/50 (46%)
Query: 1588 KKKKKKKKKKKKKKKKKKKYKKKKKKKKKKKKKKKKKKKKKKKKKKYSRE 1637
+K+ ++K K + + + K + + +K+ K++K K K E
Sbjct: 83 RKEMTNEEKNIITNLSKCDFTQMSQYFKAQTEARKQMSKEEKLKIKEENE 132
Score = 33.1 bits (76), Expect = 0.22
Identities = 8/28 (28%), Positives = 18/28 (64%)
Query: 1581 EKKKKKKKKKKKKKKKKKKKKKKKKKYK 1608
+ + +K+ K++K K K++ +K K+Y
Sbjct: 112 QTEARKQMSKEEKLKIKEENEKLLKEYG 139
Score = 32.0 bits (73), Expect = 0.45
Identities = 13/55 (23%), Positives = 27/55 (49%)
Query: 1575 RREGRGEKKKKKKKKKKKKKKKKKKKKKKKKKYKKKKKKKKKKKKKKKKKKKKKK 1629
R+E E+K K + + K + + +K+ K++K K K++ +K K+
Sbjct: 83 RKEMTNEEKNIITNLSKCDFTQMSQYFKAQTEARKQMSKEEKLKIKEENEKLLKE 137
Score = 30.1 bits (68), Expect = 1.7
Identities = 8/27 (29%), Positives = 17/27 (62%)
Query: 1581 EKKKKKKKKKKKKKKKKKKKKKKKKKY 1607
E +K+ K++K K K++ +K K+ +
Sbjct: 114 EARKQMSKEEKLKIKEENEKLLKEYGF 140
>d1oisa_ e.15.1.1 (A:) Eukaryotic DNA topoisomerase I, N-terminal
DNA-binding fragment {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 223
Score = 36.6 bits (85), Expect = 0.014
Identities = 11/56 (19%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
Query: 1582 KKKKKKKKKKKKKKKKKKKKKKKKKYKKKKKKKKK---KKKKKKKKKKKKKKKKKY 1634
K+ + K+ + K Y + +K++KK ++KK+ + +++K ++ Y
Sbjct: 75 KESGGPLNGIEIKEFSRCDFTKMFDYFQLQKEQKKQLTSQEKKQIRLEREKFEEDY 130
Score = 33.5 bits (77), Expect = 0.15
Identities = 8/28 (28%), Positives = 21/28 (75%)
Query: 1581 EKKKKKKKKKKKKKKKKKKKKKKKKKYK 1608
+K++KK+ ++KK+ + +++K ++ YK
Sbjct: 104 QKEQKKQLTSQEKKQIRLEREKFEEDYK 131
Score = 32.0 bits (73), Expect = 0.39
Identities = 10/54 (18%), Positives = 25/54 (46%)
Query: 1584 KKKKKKKKKKKKKKKKKKKKKKKYKKKKKKKKKKKKKKKKKKKKKKKKKKYSRE 1637
+ K+ + K+ + + K + +K++KK+ ++KK+ + RE
Sbjct: 71 LQVLKESGGPLNGIEIKEFSRCDFTKMFDYFQLQKEQKKQLTSQEKKQIRLERE 124
Score = 32.0 bits (73), Expect = 0.44
Identities = 8/59 (13%), Positives = 26/59 (44%), Gaps = 10/59 (16%)
Query: 1582 KKKKKKKKKKKKKKKKKKKKK----------KKKKYKKKKKKKKKKKKKKKKKKKKKKK 1630
+ K+ + K+ + + +K +KK+ ++KK+ + +++K ++
Sbjct: 71 LQVLKESGGPLNGIEIKEFSRCDFTKMFDYFQLQKEQKKQLTSQEKKQIRLEREKFEED 129
Score = 30.4 bits (69), Expect = 1.3
Identities = 7/27 (25%), Positives = 19/27 (70%)
Query: 1581 EKKKKKKKKKKKKKKKKKKKKKKKKKY 1607
E+KK+ ++KK+ + +++K ++ K+
Sbjct: 106 EQKKQLTSQEKKQIRLEREKFEEDYKF 132
Score = 30.4 bits (69), Expect = 1.4
Identities = 8/55 (14%), Positives = 24/55 (43%), Gaps = 3/55 (5%)
Query: 1578 GRGEKKKKKKKKKKKKK---KKKKKKKKKKKKYKKKKKKKKKKKKKKKKKKKKKK 1629
+ K+ + K + +K+ KK+ ++KK+ + +++K ++
Sbjct: 75 KESGGPLNGIEIKEFSRCDFTKMFDYFQLQKEQKKQLTSQEKKQIRLEREKFEED 129
>d2qaln1 g.39.1.7 (N:1-100) Ribosomal protein S14 {Escherichia coli
[TaxId: 562]}
Length = 100
Score = 34.4 bits (79), Expect = 0.016
Identities = 8/54 (14%), Positives = 18/54 (33%)
Query: 1583 KKKKKKKKKKKKKKKKKKKKKKKKYKKKKKKKKKKKKKKKKKKKKKKKKKKYSR 1636
K+ K ++ K+ K K+ + K + + K + + S
Sbjct: 2 KQSMKAREVKRVALADKYFAKRAELKAIISDVNASDEDRWNAVLKLQTLPRDSS 55
Score = 29.0 bits (65), Expect = 1.5
Identities = 6/46 (13%), Positives = 15/46 (32%)
Query: 1593 KKKKKKKKKKKKKKYKKKKKKKKKKKKKKKKKKKKKKKKKKYSREG 1638
K+ K ++ K+ K K+ + K + + +
Sbjct: 2 KQSMKAREVKRVALADKYFAKRAELKAIISDVNASDEDRWNAVLKL 47
>d1k4ta1 a.2.8.1 (A:641-712) Eukaryotic DNA topoisomerase I,
dispensable insert domain {Human (Homo sapiens) [TaxId:
9606]}
Length = 72
Score = 33.2 bits (76), Expect = 0.023
Identities = 13/43 (30%), Positives = 19/43 (44%)
Query: 1583 KKKKKKKKKKKKKKKKKKKKKKKKYKKKKKKKKKKKKKKKKKK 1625
+ K KK++ ++ K K K K K KK + KKK
Sbjct: 8 QTKIDAKKEQLADARRDLKSAKADAKVMKDAKTKKVVESKKKA 50
Score = 33.2 bits (76), Expect = 0.023
Identities = 13/43 (30%), Positives = 19/43 (44%)
Query: 1590 KKKKKKKKKKKKKKKKKYKKKKKKKKKKKKKKKKKKKKKKKKK 1632
+ K KK++ ++ K K K K K KK + KKK
Sbjct: 8 QTKIDAKKEQLADARRDLKSAKADAKVMKDAKTKKVVESKKKA 50
Score = 33.2 bits (76), Expect = 0.026
Identities = 14/46 (30%), Positives = 20/46 (43%)
Query: 1591 KKKKKKKKKKKKKKKKYKKKKKKKKKKKKKKKKKKKKKKKKKKYSR 1636
+ K KK++ ++ K K K K K KK + KKK R
Sbjct: 8 QTKIDAKKEQLADARRDLKSAKADAKVMKDAKTKKVVESKKKAVQR 53
Score = 32.1 bits (73), Expect = 0.068
Identities = 13/43 (30%), Positives = 19/43 (44%)
Query: 1587 KKKKKKKKKKKKKKKKKKKKYKKKKKKKKKKKKKKKKKKKKKK 1629
+ K KK++ ++ K K K K K KK + KKK
Sbjct: 8 QTKIDAKKEQLADARRDLKSAKADAKVMKDAKTKKVVESKKKA 50
Score = 32.1 bits (73), Expect = 0.069
Identities = 13/46 (28%), Positives = 19/46 (41%)
Query: 1581 EKKKKKKKKKKKKKKKKKKKKKKKKKYKKKKKKKKKKKKKKKKKKK 1626
+ K KK++ ++ K K K K K KK + KKK
Sbjct: 5 MNLQTKIDAKKEQLADARRDLKSAKADAKVMKDAKTKKVVESKKKA 50
Score = 31.7 bits (72), Expect = 0.096
Identities = 15/50 (30%), Positives = 21/50 (42%)
Query: 1581 EKKKKKKKKKKKKKKKKKKKKKKKKKYKKKKKKKKKKKKKKKKKKKKKKK 1630
EK + K KK++ ++ K K K K K KK + KKK
Sbjct: 1 EKSMMNLQTKIDAKKEQLADARRDLKSAKADAKVMKDAKTKKVVESKKKA 50
Score = 31.3 bits (71), Expect = 0.12
Identities = 14/52 (26%), Positives = 24/52 (46%)
Query: 1582 KKKKKKKKKKKKKKKKKKKKKKKKKYKKKKKKKKKKKKKKKKKKKKKKKKKK 1633
K KK++ ++ K K K K K KK + KKK ++ +++ K
Sbjct: 9 TKIDAKKEQLADARRDLKSAKADAKVMKDAKTKKVVESKKKAVQRLEEQLMK 60
Score = 30.9 bits (70), Expect = 0.16
Identities = 14/52 (26%), Positives = 24/52 (46%)
Query: 1581 EKKKKKKKKKKKKKKKKKKKKKKKKKYKKKKKKKKKKKKKKKKKKKKKKKKK 1632
K KK++ ++ K K K K K KK + KKK ++ +++ K
Sbjct: 9 TKIDAKKEQLADARRDLKSAKADAKVMKDAKTKKVVESKKKAVQRLEEQLMK 60
Score = 30.5 bits (69), Expect = 0.21
Identities = 13/51 (25%), Positives = 25/51 (49%)
Query: 1581 EKKKKKKKKKKKKKKKKKKKKKKKKKYKKKKKKKKKKKKKKKKKKKKKKKK 1631
+ KK++ ++ K K K K K KK + KKK ++ +++ K +
Sbjct: 12 DAKKEQLADARRDLKSAKADAKVMKDAKTKKVVESKKKAVQRLEEQLMKLE 62
Score = 29.4 bits (66), Expect = 0.63
Identities = 13/51 (25%), Positives = 24/51 (47%)
Query: 1582 KKKKKKKKKKKKKKKKKKKKKKKKKYKKKKKKKKKKKKKKKKKKKKKKKKK 1632
KK++ ++ K K K K K KK + KKK ++ +++ K +
Sbjct: 12 DAKKEQLADARRDLKSAKADAKVMKDAKTKKVVESKKKAVQRLEEQLMKLE 62
>d1j46a_ a.21.1.1 (A:) SRY {Human (Homo sapiens) [TaxId: 9606]}
Length = 85
Score = 33.3 bits (76), Expect = 0.028
Identities = 8/45 (17%), Positives = 21/45 (46%)
Query: 1576 REGRGEKKKKKKKKKKKKKKKKKKKKKKKKKYKKKKKKKKKKKKK 1620
+ + + +K ++ +K + ++K YK + ++K K K
Sbjct: 41 YQWKMLTEAEKWPFFQEAQKLQAMHREKYPNYKYRPRRKAKMLPK 85
Score = 31.7 bits (72), Expect = 0.12
Identities = 7/37 (18%), Positives = 18/37 (48%)
Query: 1591 KKKKKKKKKKKKKKKKYKKKKKKKKKKKKKKKKKKKK 1627
+K ++ +K + +++K K + ++K K K
Sbjct: 49 AEKWPFFQEAQKLQAMHREKYPNYKYRPRRKAKMLPK 85
>d1hsma_ a.21.1.1 (A:) High mobility group protein 1, HMG1 {Hamster
(Cricetulus griseus) [TaxId: 10029]}
Length = 79
Score = 32.9 bits (75), Expect = 0.043
Identities = 17/76 (22%), Positives = 28/76 (36%), Gaps = 9/76 (11%)
Query: 1563 KPLGSYIVDLLARREGRGEKKKKKKKKKKKKKKKKKKKK------KKKKKYKKKKKKKKK 1616
+P ++ L E R + K + KK + K+ Y+KK K K+
Sbjct: 5 RPPSAFF---LFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKE 61
Query: 1617 KKKKKKKKKKKKKKKK 1632
K +K + K K
Sbjct: 62 KYEKDIAAYRAKGKPD 77
>d2gy9d1 d.66.1.2 (D:2-205) Ribosomal protein S4 {Escherichia coli
[TaxId: 562]}
Length = 204
Score = 34.9 bits (80), Expect = 0.045
Identities = 12/52 (23%), Positives = 24/52 (46%), Gaps = 6/52 (11%)
Query: 1573 LARREG------RGEKKKKKKKKKKKKKKKKKKKKKKKKKYKKKKKKKKKKK 1618
L+RREG G + K K ++ + +K + Y + ++K+K +
Sbjct: 9 LSRREGTDLFLKSGVRAIDTKCKIEQAPGQHGARKPRLSDYGVQLREKQKVR 60
Score = 30.6 bits (69), Expect = 1.2
Identities = 6/42 (14%), Positives = 16/42 (38%)
Query: 1593 KKKKKKKKKKKKKKYKKKKKKKKKKKKKKKKKKKKKKKKKKY 1634
K + K K + + +K + + ++K+K +
Sbjct: 20 KSGVRAIDTKCKIEQAPGQHGARKPRLSDYGVQLREKQKVRR 61
>d1je5a_ b.40.4.7 (A:) gp2.5 {Bacteriophage T7 [TaxId: 10760]}
Length = 197
Score = 34.6 bits (79), Expect = 0.054
Identities = 11/81 (13%), Positives = 21/81 (25%)
Query: 1556 SKSYPSLKPLGSYIVDLLARREGRGEKKKKKKKKKKKKKKKKKKKKKKKKKYKKKKKKKK 1615
P + + IV ++ + + KK K + +
Sbjct: 45 PNKDPRCQRMVDEIVKCHEEAYAAAVEEYEANPPAVARGKKPLKPYEGDMPFFDNGDGTT 104
Query: 1616 KKKKKKKKKKKKKKKKKKYSR 1636
K K + KK K+
Sbjct: 105 TFKFKCYASFQDKKTKETKHI 125
Score = 33.9 bits (77), Expect = 0.094
Identities = 10/80 (12%), Positives = 23/80 (28%)
Query: 1555 ASKSYPSLKPLGSYIVDLLARREGRGEKKKKKKKKKKKKKKKKKKKKKKKKKYKKKKKKK 1614
++ P G Y VDL + ++ + K ++ ++ + + K
Sbjct: 25 GNEERGFGNPRGVYKVDLTIPNKDPRCQRMVDEIVKCHEEAYAAAVEEYEANPPAVARGK 84
Query: 1615 KKKKKKKKKKKKKKKKKKKY 1634
K K +
Sbjct: 85 KPLKPYEGDMPFFDNGDGTT 104
Score = 33.5 bits (76), Expect = 0.13
Identities = 5/62 (8%), Positives = 15/62 (24%)
Query: 1583 KKKKKKKKKKKKKKKKKKKKKKKKYKKKKKKKKKKKKKKKKKKKKKKKKKKYSREGGGGG 1642
++ ++ + + KK K + K K + +
Sbjct: 63 EEAYAAAVEEYEANPPAVARGKKPLKPYEGDMPFFDNGDGTTTFKFKCYASFQDKKTKET 122
Query: 1643 EK 1644
+
Sbjct: 123 KH 124
Score = 33.5 bits (76), Expect = 0.13
Identities = 7/65 (10%), Positives = 16/65 (24%)
Query: 1581 EKKKKKKKKKKKKKKKKKKKKKKKKKYKKKKKKKKKKKKKKKKKKKKKKKKKKYSREGGG 1640
K ++ ++ + + K K + K K S +
Sbjct: 59 VKCHEEAYAAAVEEYEANPPAVARGKKPLKPYEGDMPFFDNGDGTTTFKFKCYASFQDKK 118
Query: 1641 GGEKE 1645
E +
Sbjct: 119 TKETK 123
Score = 31.5 bits (71), Expect = 0.49
Identities = 6/69 (8%), Positives = 16/69 (23%)
Query: 1582 KKKKKKKKKKKKKKKKKKKKKKKKKYKKKKKKKKKKKKKKKKKKKKKKKKKKYSREGGGG 1641
++ ++ + + KK + K K ++
Sbjct: 63 EEAYAAAVEEYEANPPAVARGKKPLKPYEGDMPFFDNGDGTTTFKFKCYASFQDKKTKET 122
Query: 1642 GEKELVQKN 1650
LV +
Sbjct: 123 KHINLVVVD 131
>d1k99a_ a.21.1.1 (A:) Nucleolar transcription factor 1 (Upstream
binding factor 1, UBF-1) {Human (Homo sapiens) [TaxId:
9606]}
Length = 91
Score = 32.6 bits (74), Expect = 0.058
Identities = 16/81 (19%), Positives = 31/81 (38%), Gaps = 9/81 (11%)
Query: 1563 KPLGSYIVDLLARREGRGEKKKKKKKKKKKKKKKKKKKK------KKKKKYKKKKKKKKK 1616
KPL Y E R + K + K KK KKK KY + +++K+
Sbjct: 13 KPLTPYF---RFFMEKRAKYAKLHPEMSNLDLTKILSKKYKELPEKKKMKYIQDFQREKQ 69
Query: 1617 KKKKKKKKKKKKKKKKKYSRE 1637
+ ++ + ++ + +
Sbjct: 70 EFERNLARFREDHPDLIQNAK 90
Score = 32.2 bits (73), Expect = 0.091
Identities = 7/37 (18%), Positives = 20/37 (54%)
Query: 1584 KKKKKKKKKKKKKKKKKKKKKKKYKKKKKKKKKKKKK 1620
KKK K + +++K++ ++ ++++ + KK
Sbjct: 55 KKKMKYIQDFQREKQEFERNLARFREDHPDLIQNAKK 91
Score = 31.8 bits (72), Expect = 0.10
Identities = 7/37 (18%), Positives = 20/37 (54%)
Query: 1591 KKKKKKKKKKKKKKKKYKKKKKKKKKKKKKKKKKKKK 1627
KKK K + +++K+++++ + ++ + KK
Sbjct: 55 KKKMKYIQDFQREKQEFERNLARFREDHPDLIQNAKK 91
Score = 29.1 bits (65), Expect = 0.94
Identities = 5/36 (13%), Positives = 19/36 (52%)
Query: 1581 EKKKKKKKKKKKKKKKKKKKKKKKKKYKKKKKKKKK 1616
+K K + +++K++ ++ + ++ + + KK
Sbjct: 56 KKMKYIQDFQREKQEFERNLARFREDHPDLIQNAKK 91
Score = 28.8 bits (64), Expect = 1.3
Identities = 7/37 (18%), Positives = 19/37 (51%)
Query: 1587 KKKKKKKKKKKKKKKKKKKKYKKKKKKKKKKKKKKKK 1623
KKK K + +++K++ ++ + ++ + KK
Sbjct: 55 KKKMKYIQDFQREKQEFERNLARFREDHPDLIQNAKK 91
>d1kvva_ d.201.1.1 (A:) SRP19 {Archaeon Archaeoglobus fulgidus [TaxId:
2234]}
Length = 104
Score = 32.4 bits (74), Expect = 0.11
Identities = 26/101 (25%), Positives = 43/101 (42%), Gaps = 10/101 (9%)
Query: 1518 KKSLQEVRQAVKGLIVMSKELEEINTSIMFGKIPQAWASKSYPSLKPLGSYIVDLLARRE 1577
KKS E R+ + V + +L E+ + + K YP
Sbjct: 14 KKSRAEGRRIPRRFAVPNVKLHELVEASKELGLKFRAEEKKYPKSW----------WEEG 63
Query: 1578 GRGEKKKKKKKKKKKKKKKKKKKKKKKKKYKKKKKKKKKKK 1618
GR +K+ K K + +K + +++K ++KK KKKKKK
Sbjct: 64 GRVVVEKRGTKTKLMIELARKIAEIREQKREQKKDKKKKKK 104
Score = 32.0 bits (73), Expect = 0.12
Identities = 13/36 (36%), Positives = 24/36 (66%)
Query: 1598 KKKKKKKKKYKKKKKKKKKKKKKKKKKKKKKKKKKK 1633
+K+ K K + +K + +++K+++KK KKKKKK
Sbjct: 69 EKRGTKTKLMIELARKIAEIREQKREQKKDKKKKKK 104
Score = 32.0 bits (73), Expect = 0.13
Identities = 13/36 (36%), Positives = 24/36 (66%)
Query: 1591 KKKKKKKKKKKKKKKKYKKKKKKKKKKKKKKKKKKK 1626
+K+ K K + +K + +++K+++KK KKKKKK
Sbjct: 69 EKRGTKTKLMIELARKIAEIREQKREQKKDKKKKKK 104
Score = 30.9 bits (70), Expect = 0.32
Identities = 13/36 (36%), Positives = 24/36 (66%)
Query: 1595 KKKKKKKKKKKKYKKKKKKKKKKKKKKKKKKKKKKK 1630
+K+ K K + +K + +++K+++KK KKKKKK
Sbjct: 69 EKRGTKTKLMIELARKIAEIREQKREQKKDKKKKKK 104
Score = 30.5 bits (69), Expect = 0.44
Identities = 12/36 (33%), Positives = 23/36 (63%)
Query: 1592 KKKKKKKKKKKKKKKYKKKKKKKKKKKKKKKKKKKK 1627
+K+ K K + + + +++K+++KK KKKKKK
Sbjct: 69 EKRGTKTKLMIELARKIAEIREQKREQKKDKKKKKK 104
Score = 30.5 bits (69), Expect = 0.50
Identities = 13/36 (36%), Positives = 23/36 (63%)
Query: 1596 KKKKKKKKKKKYKKKKKKKKKKKKKKKKKKKKKKKK 1631
+K+ K K +K + +++K+++KK KKKKKK
Sbjct: 69 EKRGTKTKLMIELARKIAEIREQKREQKKDKKKKKK 104
Score = 29.7 bits (67), Expect = 0.73
Identities = 13/36 (36%), Positives = 24/36 (66%)
Query: 1594 KKKKKKKKKKKKKYKKKKKKKKKKKKKKKKKKKKKK 1629
+K+ K K + +K + +++K+++KK KKKKKK
Sbjct: 69 EKRGTKTKLMIELARKIAEIREQKREQKKDKKKKKK 104
>d1jmma_ b.30.6.1 (A:) V-region of surface antigen I/II (SA I/II, PAC)
{Streptococcus mutans [TaxId: 1309]}
Length = 377
Score = 34.2 bits (78), Expect = 0.12
Identities = 9/64 (14%), Positives = 18/64 (28%)
Query: 1587 KKKKKKKKKKKKKKKKKKKKYKKKKKKKKKKKKKKKKKKKKKKKKKKYSREGGGGGEKEL 1646
+K K K + ++ K + +K K + + + Y E
Sbjct: 1 QKDLADYPVKLKAYEDEQASIKAALAELEKHKNEDGNLTEPSAQNLVYDLEPNANLSLTT 60
Query: 1647 VQKN 1650
K
Sbjct: 61 DGKF 64
>d1gt0d_ a.21.1.1 (D:) Sox-2 {Mouse (Mus musculus) [TaxId: 10090]}
Length = 80
Score = 31.3 bits (71), Expect = 0.15
Identities = 8/41 (19%), Positives = 19/41 (46%)
Query: 1576 REGRGEKKKKKKKKKKKKKKKKKKKKKKKKKYKKKKKKKKK 1616
E + + +K+ + K+ + K+ YK + ++K K
Sbjct: 39 AEWKLLSETEKRPFIDEAKRLRALHMKEHPDYKYRPRRKTK 79
Score = 28.6 bits (64), Expect = 1.4
Identities = 11/77 (14%), Positives = 33/77 (42%), Gaps = 9/77 (11%)
Query: 1563 KPLGSYIVDLLARREGRGEKKKKKKKK------KKKKKKKKKKKKKKKKKYKKKKKKKKK 1616
+P+ +++ + R R + ++ K K+ + K + +K+ + + K+ +
Sbjct: 5 RPMNAFM---VWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSETEKRPFIDEAKRLRA 61
Query: 1617 KKKKKKKKKKKKKKKKK 1633
K+ K + ++K
Sbjct: 62 LHMKEHPDYKYRPRRKT 78
>d1gkub2 c.37.1.16 (B:251-498) Helicase-like "domain" of reverse
gyrase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Length = 248
Score = 33.6 bits (76), Expect = 0.17
Identities = 16/125 (12%), Positives = 46/125 (36%), Gaps = 9/125 (7%)
Query: 1502 VLKQELIRYNRLTVIIKKSLQEVRQAVKGLI---------VMSKELEEINTSIMFGKIPQ 1552
L + + RL +++ + EVR+ +K ++ V+ +E E I +
Sbjct: 124 YLYRNVDEIERLLPAVERHIDEVREILKKVMGKERPQAKDVVVREGEVIFPDLRTYIQGS 183
Query: 1553 AWASKSYPSLKPLGSYIVDLLARREGRGEKKKKKKKKKKKKKKKKKKKKKKKKKYKKKKK 1612
S+ + G+ + ++ K + K + +K ++ + +
Sbjct: 184 GRTSRLFAGGLTKGASFLLEDDSELLSAFIERAKLYDIEFKSIDEVDFEKLSRELDESRD 243
Query: 1613 KKKKK 1617
+ +++
Sbjct: 244 RYRRR 248
>d2fupa1 a.47.5.1 (A:1-130) Hypothetical protein PA3352 {Pseudomonas
aeruginosa [TaxId: 287]}
Length = 130
Score = 32.3 bits (73), Expect = 0.19
Identities = 16/74 (21%), Positives = 30/74 (40%), Gaps = 9/74 (12%)
Query: 761 KLAEAEADYAVQMEKLNSKRAQLATVLG---------KLQALRDELAQKSKDKKELEDQI 811
+L A+ Q+E+ RA++ G + R + A+ EL + +
Sbjct: 42 QLLGAKQPLMQQLERNGRARAEILREAGVSLDREGLARYARERADGAELLARGDELGELL 101
Query: 812 ELCKQKLERAEKLI 825
E C+Q R ++I
Sbjct: 102 ERCQQANLRNGRII 115
>d2efla1 a.238.1.4 (A:1-288) Formin-binding protein 1, FNBP1 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 288
Score = 32.9 bits (74), Expect = 0.28
Identities = 12/74 (16%), Positives = 34/74 (45%), Gaps = 5/74 (6%)
Query: 1565 LGSYIVDLLARREGRGEKKKKK-----KKKKKKKKKKKKKKKKKKKKYKKKKKKKKKKKK 1619
+ S I+ LAR ++++K +K ++ + K+ + K+++++ K+ + ++
Sbjct: 94 MASQIIVDLARYVQELKQERKSNFHDGRKAQQHIETCWKQLESSKRRFERDCKEADRAQQ 153
Query: 1620 KKKKKKKKKKKKKK 1633
+K K
Sbjct: 154 YFEKMDADINVTKA 167
>d2qam31 d.301.1.1 (3:1-64) Ribosomal protein L35p {Escherichia coli
[TaxId: 562]}
Length = 64
Score = 30.0 bits (68), Expect = 0.30
Identities = 13/47 (27%), Positives = 20/47 (42%)
Query: 1588 KKKKKKKKKKKKKKKKKKKYKKKKKKKKKKKKKKKKKKKKKKKKKKY 1634
K K + K+ KK K +K K + KK K+K+ + K
Sbjct: 2 KIKTVRGAAKRFKKTGKGGFKHKHANLRHILTKKATKRKRHLRPKAM 48
Score = 28.8 bits (65), Expect = 0.82
Identities = 13/45 (28%), Positives = 19/45 (42%)
Query: 1582 KKKKKKKKKKKKKKKKKKKKKKKKKYKKKKKKKKKKKKKKKKKKK 1626
K K + K+ KK K K K + KK K+K+ + K
Sbjct: 2 KIKTVRGAAKRFKKTGKGGFKHKHANLRHILTKKATKRKRHLRPK 46
Score = 26.9 bits (60), Expect = 3.5
Identities = 13/45 (28%), Positives = 20/45 (44%)
Query: 1586 KKKKKKKKKKKKKKKKKKKKKYKKKKKKKKKKKKKKKKKKKKKKK 1630
K K + K+ KK K K+K + KK K+K+ + K
Sbjct: 2 KIKTVRGAAKRFKKTGKGGFKHKHANLRHILTKKATKRKRHLRPK 46
Score = 25.8 bits (57), Expect = 9.6
Identities = 13/45 (28%), Positives = 19/45 (42%)
Query: 1583 KKKKKKKKKKKKKKKKKKKKKKKKYKKKKKKKKKKKKKKKKKKKK 1627
K K + K+ KK K K K + KK K+K+ + K
Sbjct: 2 KIKTVRGAAKRFKKTGKGGFKHKHANLRHILTKKATKRKRHLRPK 46
>d1xu6a_ g.16.3.1 (A:) Variant surface glycoprotein MITAT 1.2, VSG
221, C-terminal domain {Trypanosoma brucei brucei [TaxId:
5702]}
Length = 80
Score = 30.3 bits (68), Expect = 0.30
Identities = 13/63 (20%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Query: 1581 EKKKKKKKKKKKKKKKKKKKKKKKKKYKK--KKKKKKKKKKKKKKKKKKKKKKKKYSREG 1638
+K K + +++ + + KK + + K K + KK K++ KK + +++G
Sbjct: 10 QKHKPAESQQQAAETEGSCNKKDQNECKSPCKWHNDAENKKCTLDKEEAKKVADETAKDG 69
Query: 1639 GGG 1641
G
Sbjct: 70 KTG 72
Score = 30.3 bits (68), Expect = 0.37
Identities = 14/68 (20%), Positives = 33/68 (48%)
Query: 1566 GSYIVDLLARREGRGEKKKKKKKKKKKKKKKKKKKKKKKKKYKKKKKKKKKKKKKKKKKK 1625
GS+++++L ++ E +++ + + KK + + K K+ + KK K++ KK
Sbjct: 1 GSHMLEVLTQKHKPAESQQQAAETEGSCNKKDQNECKSPCKWHNDAENKKCTLDKEEAKK 60
Query: 1626 KKKKKKKK 1633
+ K
Sbjct: 61 VADETAKD 68
Score = 27.2 bits (60), Expect = 3.7
Identities = 8/30 (26%), Positives = 11/30 (36%)
Query: 1577 EGRGEKKKKKKKKKKKKKKKKKKKKKKKKK 1606
E KK K++ KK + K K
Sbjct: 43 HNDAENKKCTLDKEEAKKVADETAKDGKTG 72
Score = 26.8 bits (59), Expect = 5.4
Identities = 7/30 (23%), Positives = 12/30 (40%)
Query: 1580 GEKKKKKKKKKKKKKKKKKKKKKKKKKYKK 1609
+ + KK K++ KK + K K
Sbjct: 44 NDAENKKCTLDKEEAKKVADETAKDGKTGN 73
Score = 26.4 bits (58), Expect = 7.4
Identities = 10/42 (23%), Positives = 15/42 (35%)
Query: 1578 GRGEKKKKKKKKKKKKKKKKKKKKKKKKKYKKKKKKKKKKKK 1619
+ E K K + KK K++ KK + K K
Sbjct: 32 DQNECKSPCKWHNDAENKKCTLDKEEAKKVADETAKDGKTGN 73
>d3bn0a1 d.27.1.1 (A:2-102) Ribosomal protein S16 {Aquifex aeolicus
[TaxId: 63363]}
Length = 101
Score = 30.9 bits (70), Expect = 0.32
Identities = 4/29 (13%), Positives = 11/29 (37%)
Query: 1594 KKKKKKKKKKKKKYKKKKKKKKKKKKKKK 1622
K+ + Y+ K+ +K++
Sbjct: 73 WNHGILKEVVPEGYEMKRVGDYYVFEKRE 101
Score = 30.2 bits (68), Expect = 0.59
Identities = 3/29 (10%), Positives = 10/29 (34%)
Query: 1603 KKKKYKKKKKKKKKKKKKKKKKKKKKKKK 1631
K+ + + K+ +K++
Sbjct: 73 WNHGILKEVVPEGYEMKRVGDYYVFEKRE 101
Score = 29.8 bits (67), Expect = 0.75
Identities = 3/29 (10%), Positives = 10/29 (34%)
Query: 1602 KKKKKYKKKKKKKKKKKKKKKKKKKKKKK 1630
K+ + + K+ +K++
Sbjct: 73 WNHGILKEVVPEGYEMKRVGDYYVFEKRE 101
Score = 29.8 bits (67), Expect = 0.75
Identities = 3/34 (8%), Positives = 12/34 (35%)
Query: 1570 VDLLARREGRGEKKKKKKKKKKKKKKKKKKKKKK 1603
+ G ++ + + K+ +K++
Sbjct: 68 AKAILWNHGILKEVVPEGYEMKRVGDYYVFEKRE 101
Score = 29.0 bits (65), Expect = 1.4
Identities = 3/29 (10%), Positives = 10/29 (34%)
Query: 1599 KKKKKKKKYKKKKKKKKKKKKKKKKKKKK 1627
K+ + + K+ +K++
Sbjct: 73 WNHGILKEVVPEGYEMKRVGDYYVFEKRE 101
Score = 28.6 bits (64), Expect = 2.0
Identities = 3/29 (10%), Positives = 10/29 (34%)
Query: 1598 KKKKKKKKKYKKKKKKKKKKKKKKKKKKK 1626
K+ + + K+ +K++
Sbjct: 73 WNHGILKEVVPEGYEMKRVGDYYVFEKRE 101
Score = 28.6 bits (64), Expect = 2.0
Identities = 3/29 (10%), Positives = 11/29 (37%)
Query: 1583 KKKKKKKKKKKKKKKKKKKKKKKKYKKKK 1611
K+ + + K+ ++K++
Sbjct: 73 WNHGILKEVVPEGYEMKRVGDYYVFEKRE 101
Score = 28.2 bits (63), Expect = 2.3
Identities = 3/29 (10%), Positives = 10/29 (34%)
Query: 1597 KKKKKKKKKKYKKKKKKKKKKKKKKKKKK 1625
K+ + + K+ +K++
Sbjct: 73 WNHGILKEVVPEGYEMKRVGDYYVFEKRE 101
Score = 28.2 bits (63), Expect = 2.7
Identities = 3/29 (10%), Positives = 11/29 (37%)
Query: 1605 KKYKKKKKKKKKKKKKKKKKKKKKKKKKK 1633
+ K+ + + K+ +K++
Sbjct: 73 WNHGILKEVVPEGYEMKRVGDYYVFEKRE 101
Score = 28.2 bits (63), Expect = 2.8
Identities = 4/26 (15%), Positives = 11/26 (42%)
Query: 1580 GEKKKKKKKKKKKKKKKKKKKKKKKK 1605
G K+ + + K+ +K++
Sbjct: 76 GILKEVVPEGYEMKRVGDYYVFEKRE 101
Score = 27.9 bits (62), Expect = 3.1
Identities = 4/29 (13%), Positives = 11/29 (37%)
Query: 1586 KKKKKKKKKKKKKKKKKKKKKYKKKKKKK 1614
K+ + + K+ Y +K++
Sbjct: 73 WNHGILKEVVPEGYEMKRVGDYYVFEKRE 101
Score = 27.9 bits (62), Expect = 3.2
Identities = 2/29 (6%), Positives = 9/29 (31%)
Query: 1601 KKKKKKYKKKKKKKKKKKKKKKKKKKKKK 1629
+ + + K+ +K++
Sbjct: 73 WNHGILKEVVPEGYEMKRVGDYYVFEKRE 101
Score = 27.5 bits (61), Expect = 4.9
Identities = 4/29 (13%), Positives = 11/29 (37%)
Query: 1585 KKKKKKKKKKKKKKKKKKKKKKYKKKKKK 1613
K+ + + K+ Y +K++
Sbjct: 73 WNHGILKEVVPEGYEMKRVGDYYVFEKRE 101
Score = 27.5 bits (61), Expect = 5.3
Identities = 3/29 (10%), Positives = 10/29 (34%)
Query: 1588 KKKKKKKKKKKKKKKKKKKYKKKKKKKKK 1616
K+ + + K+ +K++
Sbjct: 73 WNHGILKEVVPEGYEMKRVGDYYVFEKRE 101
Score = 27.5 bits (61), Expect = 5.4
Identities = 3/29 (10%), Positives = 10/29 (34%)
Query: 1587 KKKKKKKKKKKKKKKKKKKKYKKKKKKKK 1615
K+ + + K+ +K++
Sbjct: 73 WNHGILKEVVPEGYEMKRVGDYYVFEKRE 101
Score = 27.1 bits (60), Expect = 5.7
Identities = 3/29 (10%), Positives = 10/29 (34%)
Query: 1589 KKKKKKKKKKKKKKKKKKYKKKKKKKKKK 1617
K+ + + K+ +K++
Sbjct: 73 WNHGILKEVVPEGYEMKRVGDYYVFEKRE 101
Score = 27.1 bits (60), Expect = 6.2
Identities = 3/29 (10%), Positives = 10/29 (34%)
Query: 1584 KKKKKKKKKKKKKKKKKKKKKKKYKKKKK 1612
K+ + + K+ +K++
Sbjct: 73 WNHGILKEVVPEGYEMKRVGDYYVFEKRE 101
Score = 27.1 bits (60), Expect = 6.5
Identities = 3/29 (10%), Positives = 9/29 (31%)
Query: 1582 KKKKKKKKKKKKKKKKKKKKKKKKKYKKK 1610
K+ + + K+ K++
Sbjct: 73 WNHGILKEVVPEGYEMKRVGDYYVFEKRE 101
Score = 27.1 bits (60), Expect = 6.6
Identities = 3/29 (10%), Positives = 9/29 (31%)
Query: 1593 KKKKKKKKKKKKKKYKKKKKKKKKKKKKK 1621
K+ + K+ +K++
Sbjct: 73 WNHGILKEVVPEGYEMKRVGDYYVFEKRE 101
Score = 27.1 bits (60), Expect = 6.7
Identities = 3/29 (10%), Positives = 10/29 (34%)
Query: 1595 KKKKKKKKKKKKYKKKKKKKKKKKKKKKK 1623
K+ + + K+ +K++
Sbjct: 73 WNHGILKEVVPEGYEMKRVGDYYVFEKRE 101
Score = 27.1 bits (60), Expect = 6.9
Identities = 3/29 (10%), Positives = 9/29 (31%)
Query: 1596 KKKKKKKKKKKYKKKKKKKKKKKKKKKKK 1624
K+ + K+ +K++
Sbjct: 73 WNHGILKEVVPEGYEMKRVGDYYVFEKRE 101
>d1ofux_ c.37.1.22 (X:) Hypothetical protein PA3008 {Pseudomonas
aeruginosa [TaxId: 287]}
Length = 119
Score = 31.3 bits (71), Expect = 0.34
Identities = 12/60 (20%), Positives = 23/60 (38%), Gaps = 6/60 (10%)
Query: 928 NSNKWPLLIDPQGQANK-WLKN--VEKGNLSVVK-LTDATLLRTLERAIRTGT--AVLLE 981
+W LI P WL+ + + + +++ +A L A+R G V+
Sbjct: 31 QDARWLTLIAPPASLTHEWLRRAGLNRERILLLQAKDNAAALALSCEALRLGRSHTVVSW 90
>d1nu9c1 a.8.6.1 (C:1-145) Staphylocoagulase {Staphylococcus aureus
[TaxId: 1280]}
Length = 145
Score = 31.4 bits (71), Expect = 0.35
Identities = 19/72 (26%), Positives = 34/72 (47%), Gaps = 4/72 (5%)
Query: 1567 SYIVDLLARREGRGEKKKKKKKKKKKKKKKKKKK---KKKKKKYKKKKKKKKKKKKKKKK 1623
+ +L GEK+ K K K + + + ++KK +Y++ KK KK K++
Sbjct: 39 INALGILETYH-YGEKEYKDAKDKLMTRILGEDQYLLERKKVQYEEYKKLYKKYKEENPT 97
Query: 1624 KKKKKKKKKKYS 1635
K K K +Y+
Sbjct: 98 SKVKMKTFDQYT 109
>d2azeb1 e.63.1.2 (B:201-301) Transcription factor E2F1 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 101
Score = 30.4 bits (69), Expect = 0.39
Identities = 8/32 (25%), Positives = 19/32 (59%)
Query: 788 GKLQALRDELAQKSKDKKELEDQIELCKQKLE 819
G+L+ L +L Q + +++L+ + +C +L
Sbjct: 1 GRLEGLTQDLRQLQESEQQLDHLMNICTTQLR 32
>d1ckta_ a.21.1.1 (A:) High mobility group protein 1, HMG1 {Rat
(Rattus norvegicus) [TaxId: 10116]}
Length = 71
Score = 29.8 bits (67), Expect = 0.39
Identities = 17/72 (23%), Positives = 29/72 (40%), Gaps = 4/72 (5%)
Query: 1563 KPLGSYIVDLLARREGRGEKKKKKKKKKKKKKKKKKKKKKKKKKYKKKKKKKKKKKKKKK 1622
+ SY + RE + KKK + KK ++ K K+K K + K
Sbjct: 4 GKMSSYAFFVQTCRE----EHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKA 59
Query: 1623 KKKKKKKKKKKY 1634
K + +++ K Y
Sbjct: 60 DKARYEREMKTY 71
Score = 28.3 bits (63), Expect = 1.2
Identities = 13/54 (24%), Positives = 23/54 (42%)
Query: 1584 KKKKKKKKKKKKKKKKKKKKKKKYKKKKKKKKKKKKKKKKKKKKKKKKKKYSRE 1637
+ +++ KKK + K ++ K K+K K + K K +Y RE
Sbjct: 14 QTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYERE 67
>d1v9da_ a.207.1.1 (A:) Diaphanous protein homolog 1, dia1 {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 332
Score = 32.6 bits (74), Expect = 0.40
Identities = 7/31 (22%), Positives = 21/31 (67%)
Query: 1591 KKKKKKKKKKKKKKKKYKKKKKKKKKKKKKK 1621
+ K+ +K+++ ++K ++ K K+K +K++
Sbjct: 301 LQAVKENQKRRETEEKMRRAKLAKEKAEKER 331
Score = 32.6 bits (74), Expect = 0.40
Identities = 7/31 (22%), Positives = 21/31 (67%)
Query: 1601 KKKKKKYKKKKKKKKKKKKKKKKKKKKKKKK 1631
+ K+ +K+++ ++K ++ K K+K +K++
Sbjct: 301 LQAVKENQKRRETEEKMRRAKLAKEKAEKER 331
Score = 31.5 bits (71), Expect = 0.82
Identities = 7/31 (22%), Positives = 20/31 (64%)
Query: 1602 KKKKKYKKKKKKKKKKKKKKKKKKKKKKKKK 1632
+ K +K+++ ++K ++ K K+K +K++
Sbjct: 301 LQAVKENQKRRETEEKMRRAKLAKEKAEKER 331
Score = 30.7 bits (69), Expect = 1.4
Identities = 7/30 (23%), Positives = 20/30 (66%)
Query: 1604 KKKYKKKKKKKKKKKKKKKKKKKKKKKKKK 1633
+ K+ +K+++ ++K ++ K K+K +K+
Sbjct: 301 LQAVKENQKRRETEEKMRRAKLAKEKAEKE 330
Score = 29.9 bits (67), Expect = 2.7
Identities = 7/33 (21%), Positives = 20/33 (60%)
Query: 1605 KKYKKKKKKKKKKKKKKKKKKKKKKKKKKYSRE 1637
+ + K+ +K+++ ++K ++ K K+K +E
Sbjct: 298 NMFLQAVKENQKRRETEEKMRRAKLAKEKAEKE 330
>d1ivsa1 a.2.7.3 (A:797-862) Valyl-tRNA synthetase (ValRS) C-terminal
domain {Thermus thermophilus [TaxId: 274]}
Length = 66
Score = 29.7 bits (67), Expect = 0.44
Identities = 6/53 (11%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 1581 EKKKKKKKKKKKKKKKKKKKKK-KKKKYKKKKKKKKKKKKKKKKKKKKKKKKK 1632
+++++K+ K+ ++ ++K +++K K+ + ++ + K+ ++ ++
Sbjct: 5 WRRRQEKRLKELLALAERSQRKLASPGFREKAPKEVVEAEEARLKENLEQAER 57
Score = 26.2 bits (58), Expect = 7.4
Identities = 8/54 (14%), Positives = 28/54 (51%)
Query: 1579 RGEKKKKKKKKKKKKKKKKKKKKKKKKKYKKKKKKKKKKKKKKKKKKKKKKKKK 1632
R EK+ K+ ++ ++K ++K K+ + ++ + K+ ++ ++ ++
Sbjct: 8 RQEKRLKELLALAERSQRKLASPGFREKAPKEVVEAEEARLKENLEQAERIREA 61
>d1f3ub_ b.65.1.1 (B:) TFIIF alpha subunit, Rap74 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 149
Score = 31.3 bits (71), Expect = 0.47
Identities = 7/69 (10%), Positives = 30/69 (43%)
Query: 1579 RGEKKKKKKKKKKKKKKKKKKKKKKKKKYKKKKKKKKKKKKKKKKKKKKKKKKKKYSREG 1638
+ ++ KK ++++ + ++ +K +++ ++KK K+ + + + +
Sbjct: 39 NQARLERDLSNKKIYQEEEMPESGAGSEFNRKLREEARRKKYGIVLKEFRPEDQPWLLRV 98
Query: 1639 GGGGEKELV 1647
G ++
Sbjct: 99 NGKSGRKFK 107
Score = 30.6 bits (69), Expect = 0.74
Identities = 10/65 (15%), Positives = 30/65 (46%)
Query: 1575 RREGRGEKKKKKKKKKKKKKKKKKKKKKKKKKYKKKKKKKKKKKKKKKKKKKKKKKKKKY 1634
++ E++ + + +K +++ ++KK K+ + + + + K +K K
Sbjct: 49 NKKIYQEEEMPESGAGSEFNRKLREEARRKKYGIVLKEFRPEDQPWLLRVNGKSGRKFKG 108
Query: 1635 SREGG 1639
++GG
Sbjct: 109 IKKGG 113
Score = 27.9 bits (62), Expect = 6.2
Identities = 9/41 (21%), Positives = 18/41 (43%), Gaps = 6/41 (14%)
Query: 1574 ARREGRGEKKKKKKKKKKKKKKKKKK------KKKKKKKYK 1608
R+ R E ++KK K+ + + + K +K+K
Sbjct: 67 FNRKLREEARRKKYGIVLKEFRPEDQPWLLRVNGKSGRKFK 107
Score = 27.5 bits (61), Expect = 9.5
Identities = 6/50 (12%), Positives = 23/50 (46%)
Query: 1583 KKKKKKKKKKKKKKKKKKKKKKKKYKKKKKKKKKKKKKKKKKKKKKKKKK 1632
+ + ++ KK ++++ + + +K +++ ++KK K+
Sbjct: 37 TWNQARLERDLSNKKIYQEEEMPESGAGSEFNRKLREEARRKKYGIVLKE 86
>d1lwma_ a.21.1.1 (A:) NHP6a {Baker's yeast (Saccharomyces cerevisiae)
[TaxId: 4932]}
Length = 93
Score = 30.3 bits (68), Expect = 0.48
Identities = 14/80 (17%), Positives = 28/80 (35%), Gaps = 21/80 (26%)
Query: 1579 RGEKKKKKKKKKKKKKKKK----------KKKKKKKKKYKKKKKKKKKK----------- 1617
R KK+ +KKK K+ + + + + + K
Sbjct: 5 REPKKRTTRKKKDPNAPKRALSAYMFFANENRDIVRSENPDITFGQVGKKLGEKWKALTP 64
Query: 1618 KKKKKKKKKKKKKKKKYSRE 1637
++K+ + K + KK+Y E
Sbjct: 65 EEKQPYEAKAQADKKRYESE 84
Score = 28.7 bits (64), Expect = 1.4
Identities = 13/69 (18%), Positives = 28/69 (40%), Gaps = 3/69 (4%)
Query: 1563 KPLGSYIVDLLARRE---GRGEKKKKKKKKKKKKKKKKKKKKKKKKKYKKKKKKKKKKKK 1619
+ L +Y+ R+ + KK +K K ++K+ Y+ K + KK+ +
Sbjct: 23 RALSAYMFFANENRDIVRSENPDITFGQVGKKLGEKWKALTPEEKQPYEAKAQADKKRYE 82
Query: 1620 KKKKKKKKK 1628
+K+
Sbjct: 83 SEKELYNAT 91
Score = 27.9 bits (62), Expect = 3.1
Identities = 6/22 (27%), Positives = 11/22 (50%)
Query: 1605 KKYKKKKKKKKKKKKKKKKKKK 1626
++ KK+ +KKK K+
Sbjct: 2 VTPREPKKRTTRKKKDPNAPKR 23
Score = 26.8 bits (59), Expect = 7.0
Identities = 7/27 (25%), Positives = 12/27 (44%)
Query: 1608 KKKKKKKKKKKKKKKKKKKKKKKKKKY 1634
++ KK+ +KKK K+ Y
Sbjct: 2 VTPREPKKRTTRKKKDPNAPKRALSAY 28
Score = 26.8 bits (59), Expect = 7.3
Identities = 7/25 (28%), Positives = 12/25 (48%)
Query: 1611 KKKKKKKKKKKKKKKKKKKKKKKYS 1635
++ KK+ +KKK K+ S
Sbjct: 2 VTPREPKKRTTRKKKDPNAPKRALS 26
>d1vqol1 c.12.1.1 (L:1-150) Ribosomal protein L15 (L15p) {Archaeon
Haloarcula marismortui [TaxId: 2238]}
Length = 150
Score = 31.2 bits (70), Expect = 0.50
Identities = 8/93 (8%), Positives = 23/93 (24%)
Query: 1547 FGKIPQAWASKSYPSLKPLGSYIVDLLARREGRGEKKKKKKKKKKKKKKKKKKKKKKKKK 1606
GK K + +D + + + + + ++
Sbjct: 46 LGKSGFKRPQKVQEEAATIDVREIDENVTLLAADDVAEVEDGGFRVDVRDVVEEADDADY 105
Query: 1607 YKKKKKKKKKKKKKKKKKKKKKKKKKKYSREGG 1639
K + + + + ++K GG
Sbjct: 106 VKVLGAGQVRHELTLIADDFSEGAREKVEGAGG 138
>d1i3ja_ d.285.1.1 (A:) DNA-binding domain of intron endonuclease
I-TevI {Bacteriophage T4 [TaxId: 10665]}
Length = 96
Score = 30.2 bits (68), Expect = 0.53
Identities = 12/55 (21%), Positives = 20/55 (36%)
Query: 1584 KKKKKKKKKKKKKKKKKKKKKKKYKKKKKKKKKKKKKKKKKKKKKKKKKKYSREG 1638
+ + K + + + + K K K +K K KK KK S +G
Sbjct: 7 VRIQTSAYTCSKCRNRSGENNSFFNHKHSDITKSKISEKMKGKKPSNIKKISCDG 61
>d1qrva_ a.21.1.1 (A:) HMG-D {Drosophila melanogaster [TaxId: 7227]}
Length = 73
Score = 29.4 bits (66), Expect = 0.54
Identities = 13/70 (18%), Positives = 27/70 (38%), Gaps = 7/70 (10%)
Query: 1563 KPLGSYIVDLLARREGRGEKKKKKKKKKKK----KKKKKKKKKKKKKKYKKKKKKKKKKK 1618
+PL +Y+ L R K++ K + + + K K +++ K K K
Sbjct: 6 RPLSAYM---LWLNSARESIKRENPGIKVTEVAKRGGELWRAMKDKSEWEAKAAKAKDDY 62
Query: 1619 KKKKKKKKKK 1628
+ K+ +
Sbjct: 63 DRAVKEFEAN 72
>d2d4ca1 a.238.1.1 (A:11-247) Endophilin-1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 237
Score = 31.6 bits (71), Expect = 0.59
Identities = 12/80 (15%), Positives = 31/80 (38%), Gaps = 3/80 (3%)
Query: 1561 SLKPLGSYIVDLLARREGR---GEKKKKKKKKKKKKKKKKKKKKKKKKKYKKKKKKKKKK 1617
+++ L L + + K ++ + + KK + + KKK++
Sbjct: 110 AMRELSEVKDSLDIEVKQNFIDPLQNLHDKDLREIQSALQHHLKKLEGRRLDFDYKKKRQ 169
Query: 1618 KKKKKKKKKKKKKKKKYSRE 1637
K ++ ++ +K S+E
Sbjct: 170 GKIPDEELRQALEKFDESKE 189
Score = 31.6 bits (71), Expect = 0.71
Identities = 8/57 (14%), Positives = 24/57 (42%)
Query: 1581 EKKKKKKKKKKKKKKKKKKKKKKKKKYKKKKKKKKKKKKKKKKKKKKKKKKKKYSRE 1637
+ K ++ + + KK + ++ KKK++ K ++ ++ +K +
Sbjct: 134 QNLHDKDLREIQSALQHHLKKLEGRRLDFDYKKKRQGKIPDEELRQALEKFDESKEI 190
Score = 30.5 bits (68), Expect = 1.4
Identities = 10/57 (17%), Positives = 27/57 (47%)
Query: 1581 EKKKKKKKKKKKKKKKKKKKKKKKKKYKKKKKKKKKKKKKKKKKKKKKKKKKKYSRE 1637
+K ++ + + KK + ++ YKKK++ K ++ ++ +K + K+
Sbjct: 138 DKDLREIQSALQHHLKKLEGRRLDFDYKKKRQGKIPDEELRQALEKFDESKEIAESS 194
>d2j0181 d.301.1.1 (8:2-65) Ribosomal protein L35p {Thermus
thermophilus [TaxId: 274]}
Length = 64
Score = 28.8 bits (65), Expect = 0.67
Identities = 13/47 (27%), Positives = 20/47 (42%)
Query: 1588 KKKKKKKKKKKKKKKKKKKYKKKKKKKKKKKKKKKKKKKKKKKKKKY 1634
K K K KK+ K K K K+ +K K+ ++K +K
Sbjct: 2 KMKTHKGAKKRVKITASGKVVAMKTGKRHLNWQKSGKEIRQKGRKFV 48
Score = 27.7 bits (62), Expect = 1.8
Identities = 13/46 (28%), Positives = 20/46 (43%)
Query: 1582 KKKKKKKKKKKKKKKKKKKKKKKKKYKKKKKKKKKKKKKKKKKKKK 1627
K K K KK+ K K K K+ +K K+ ++K +K
Sbjct: 2 KMKTHKGAKKRVKITASGKVVAMKTGKRHLNWQKSGKEIRQKGRKF 47
Score = 26.5 bits (59), Expect = 5.4
Identities = 13/46 (28%), Positives = 20/46 (43%)
Query: 1586 KKKKKKKKKKKKKKKKKKKKKYKKKKKKKKKKKKKKKKKKKKKKKK 1631
K K K KK+ K K K K+ +K K+ ++K +K
Sbjct: 2 KMKTHKGAKKRVKITASGKVVAMKTGKRHLNWQKSGKEIRQKGRKF 47
>d1zgha2 c.65.1.1 (A:1-164) Methionyl-tRNAfmet formyltransferase
{Clostridium thermocellum [TaxId: 1515]}
Length = 164
Score = 30.8 bits (69), Expect = 0.70
Identities = 9/39 (23%), Positives = 15/39 (38%)
Query: 1596 KKKKKKKKKKKYKKKKKKKKKKKKKKKKKKKKKKKKKKY 1634
K K +K+KK+ + K K + +K K
Sbjct: 8 TKSWNIKNAQKFKKENESKYNTTIITNKDELTFEKVKLI 46
Score = 30.8 bits (69), Expect = 0.75
Identities = 10/40 (25%), Positives = 15/40 (37%)
Query: 1588 KKKKKKKKKKKKKKKKKKKYKKKKKKKKKKKKKKKKKKKK 1627
K K +K KK+ + KY K + +K K
Sbjct: 8 TKSWNIKNAQKFKKENESKYNTTIITNKDELTFEKVKLIN 47
Score = 30.0 bits (67), Expect = 1.4
Identities = 9/40 (22%), Positives = 14/40 (35%)
Query: 1586 KKKKKKKKKKKKKKKKKKKKKYKKKKKKKKKKKKKKKKKK 1625
K K +K KK+ + K K + +K K
Sbjct: 8 TKSWNIKNAQKFKKENESKYNTTIITNKDELTFEKVKLIN 47
Score = 29.7 bits (66), Expect = 1.7
Identities = 9/40 (22%), Positives = 14/40 (35%)
Query: 1585 KKKKKKKKKKKKKKKKKKKKKKYKKKKKKKKKKKKKKKKK 1624
K K +K KK+ + K K + +K K
Sbjct: 8 TKSWNIKNAQKFKKENESKYNTTIITNKDELTFEKVKLIN 47
Score = 29.3 bits (65), Expect = 2.4
Identities = 9/40 (22%), Positives = 14/40 (35%)
Query: 1592 KKKKKKKKKKKKKKKYKKKKKKKKKKKKKKKKKKKKKKKK 1631
K K +K KK+ + K K + +K K
Sbjct: 8 TKSWNIKNAQKFKKENESKYNTTIITNKDELTFEKVKLIN 47
Score = 29.3 bits (65), Expect = 2.4
Identities = 9/40 (22%), Positives = 14/40 (35%)
Query: 1583 KKKKKKKKKKKKKKKKKKKKKKKKYKKKKKKKKKKKKKKK 1622
K K +K KK+ + K K + +K K
Sbjct: 8 TKSWNIKNAQKFKKENESKYNTTIITNKDELTFEKVKLIN 47
Score = 29.3 bits (65), Expect = 2.4
Identities = 9/40 (22%), Positives = 14/40 (35%)
Query: 1584 KKKKKKKKKKKKKKKKKKKKKKKYKKKKKKKKKKKKKKKK 1623
K K +K KK+ + K K + +K K
Sbjct: 8 TKSWNIKNAQKFKKENESKYNTTIITNKDELTFEKVKLIN 47
Score = 29.3 bits (65), Expect = 2.5
Identities = 9/40 (22%), Positives = 14/40 (35%)
Query: 1587 KKKKKKKKKKKKKKKKKKKKYKKKKKKKKKKKKKKKKKKK 1626
K K +K KK+ + K K + +K K
Sbjct: 8 TKSWNIKNAQKFKKENESKYNTTIITNKDELTFEKVKLIN 47
Score = 28.5 bits (63), Expect = 4.4
Identities = 9/40 (22%), Positives = 14/40 (35%)
Query: 1590 KKKKKKKKKKKKKKKKKYKKKKKKKKKKKKKKKKKKKKKK 1629
K K +K KK+ + K K + +K K
Sbjct: 8 TKSWNIKNAQKFKKENESKYNTTIITNKDELTFEKVKLIN 47
Score = 28.1 bits (62), Expect = 5.1
Identities = 9/40 (22%), Positives = 14/40 (35%)
Query: 1582 KKKKKKKKKKKKKKKKKKKKKKKKKYKKKKKKKKKKKKKK 1621
K K +K KK+ + K K + +K K
Sbjct: 8 TKSWNIKNAQKFKKENESKYNTTIITNKDELTFEKVKLIN 47
Score = 27.7 bits (61), Expect = 7.5
Identities = 9/40 (22%), Positives = 13/40 (32%)
Query: 1591 KKKKKKKKKKKKKKKKYKKKKKKKKKKKKKKKKKKKKKKK 1630
K K +K KK+ K K + +K K
Sbjct: 8 TKSWNIKNAQKFKKENESKYNTTIITNKDELTFEKVKLIN 47
Score = 27.3 bits (60), Expect = 9.8
Identities = 8/34 (23%), Positives = 14/34 (41%)
Query: 1604 KKKYKKKKKKKKKKKKKKKKKKKKKKKKKKYSRE 1637
K + K +K KK+ + K K + + E
Sbjct: 8 TKSWNIKNAQKFKKENESKYNTTIITNKDELTFE 41
>d1vqo31 g.41.8.3 (3:1-92) Ribosomal protein L44e {Archaeon Haloarcula
marismortui [TaxId: 2238]}
Length = 92
Score = 29.3 bits (66), Expect = 0.84
Identities = 9/56 (16%), Positives = 18/56 (32%), Gaps = 3/56 (5%)
Query: 1573 LARREGRGEKKKKKKKKKKKKKKKKKKKKKKKK---KYKKKKKKKKKKKKKKKKKK 1625
+ R ++ K K K KK KY+ + K ++ + +
Sbjct: 32 GMKWIDRQRERNSGIGNDGKFSKVPGGDKPTKKTDLKYRCGECGKAHLREGWRAGR 87
>gi|94984680|ref|YP_604044.1|(2-62:67) 50S ribosomal protein L35
[Deinococcus geothermalis DSM 11300]
gi|145572732|sp|Q1J0V9.1|RL35_DEIGD RecName: Full=50S
ribosomal protein L35 gi|94554961|gb|ABF44875.1|
ribosomal protein L35 [Deinococcus geothermalis DSM
11300] E=4e-21 s/c=1.69 id=84% cov=98%
Length = 61
Score = 28.5 bits (64), Expect = 0.97
Identities = 11/47 (23%), Positives = 17/47 (36%)
Query: 1588 KKKKKKKKKKKKKKKKKKKYKKKKKKKKKKKKKKKKKKKKKKKKKKY 1634
K K KK ++ K K K K+ + K + + K K
Sbjct: 2 KMKTKKSMTRRVKVTATGKVMAFKSGKRHQNTGKSGDEIRGKGKGFV 48
Score = 27.7 bits (62), Expect = 1.7
Identities = 11/45 (24%), Positives = 17/45 (37%)
Query: 1582 KKKKKKKKKKKKKKKKKKKKKKKKKYKKKKKKKKKKKKKKKKKKK 1626
K K KK ++ K K K K+ + K + + K K
Sbjct: 2 KMKTKKSMTRRVKVTATGKVMAFKSGKRHQNTGKSGDEIRGKGKG 46
Score = 26.2 bits (58), Expect = 7.0
Identities = 11/45 (24%), Positives = 17/45 (37%)
Query: 1586 KKKKKKKKKKKKKKKKKKKKKYKKKKKKKKKKKKKKKKKKKKKKK 1630
K K KK ++ K K K K+ + K + + K K
Sbjct: 2 KMKTKKSMTRRVKVTATGKVMAFKSGKRHQNTGKSGDEIRGKGKG 46
>d1wgfa_ a.21.1.1 (A:) Nucleolar transcription factor 1 (Upstream
binding factor 1, UBF-1) {Mouse (Mus musculus) [TaxId:
10090]}
Length = 90
Score = 29.2 bits (65), Expect = 0.98
Identities = 12/80 (15%), Positives = 33/80 (41%), Gaps = 20/80 (25%)
Query: 1578 GRGEKKKKKKKKKKKKKKK---------KKKKKKKKKKYKKKKKKKKKK----------- 1617
G+ ++ K +K K+ ++K+++ +++ + + + +
Sbjct: 5 SSGKPSQEGGKGGSEKPKRPVSAMFIFSEEKRRQLQEERPELSESELTRLLARMWNDLSE 64
Query: 1618 KKKKKKKKKKKKKKKKYSRE 1637
KKK K K ++ K + R+
Sbjct: 65 KKKAKYKAREAALKAQSERK 84
Score = 28.4 bits (63), Expect = 2.0
Identities = 11/63 (17%), Positives = 28/63 (44%), Gaps = 3/63 (4%)
Query: 1563 KPLGSYIVDLLARREGRGEKKKKKKKKKKKKKKKKKKKK---KKKKKYKKKKKKKKKKKK 1619
+P+ + + +R E++ + + + + + KKK KYK ++ K + +
Sbjct: 23 RPVSAMFIFSEEKRRQLQEERPELSESELTRLLARMWNDLSEKKKAKYKAREAALKAQSE 82
Query: 1620 KKK 1622
+K
Sbjct: 83 RKS 85
>d1lo1a_ g.39.1.2 (A:) Steroid hormone receptor Err2 DNA-binding
domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 90
Score = 29.2 bits (65), Expect = 1.1
Identities = 9/59 (15%), Positives = 26/59 (44%)
Query: 1575 RREGRGEKKKKKKKKKKKKKKKKKKKKKKKKKYKKKKKKKKKKKKKKKKKKKKKKKKKK 1633
+R +G + + + K+++K + ++ K K K+ + + + ++K K
Sbjct: 32 KRTIQGNIEYSCPATNECEITKRRRKSCQACRFMKALKVGMLKEGVRLDRVRGGRQKYK 90
>d1usta_ a.4.5.13 (A:) Histone H1 homologue Hho1p {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 92
Score = 29.0 bits (65), Expect = 1.1
Identities = 10/38 (26%), Positives = 16/38 (42%)
Query: 1585 KKKKKKKKKKKKKKKKKKKKKKYKKKKKKKKKKKKKKK 1622
KK + ++ K K KKK + KK+K+
Sbjct: 53 NNAIKKGVEAGDFEQPKGPAGAVKLAKKKSPEVKKEKE 90
Score = 27.8 bits (62), Expect = 3.3
Identities = 10/45 (22%), Positives = 17/45 (37%)
Query: 1588 KKKKKKKKKKKKKKKKKKKYKKKKKKKKKKKKKKKKKKKKKKKKK 1632
KK + +++ K K KKK + KK+K+
Sbjct: 46 SNFDLYFNNAIKKGVEAGDFEQPKGPAGAVKLAKKKSPEVKKEKE 90
Score = 27.4 bits (61), Expect = 4.8
Identities = 10/45 (22%), Positives = 16/45 (35%)
Query: 1581 EKKKKKKKKKKKKKKKKKKKKKKKKKYKKKKKKKKKKKKKKKKKK 1625
KK + ++ K K KKK + KK+K+
Sbjct: 46 SNFDLYFNNAIKKGVEAGDFEQPKGPAGAVKLAKKKSPEVKKEKE 90
Score = 26.7 bits (59), Expect = 8.3
Identities = 10/45 (22%), Positives = 16/45 (35%)
Query: 1585 KKKKKKKKKKKKKKKKKKKKKKYKKKKKKKKKKKKKKKKKKKKKK 1629
KK + ++ K K KKK + KK+K+
Sbjct: 46 SNFDLYFNNAIKKGVEAGDFEQPKGPAGAVKLAKKKSPEVKKEKE 90
Score = 26.3 bits (58), Expect = 9.4
Identities = 14/67 (20%), Positives = 21/67 (31%), Gaps = 3/67 (4%)
Query: 1561 SLKPLGSYIVDLLARREGRGEKKKKKKKKKKKKKKKKKKKKKKKKKYKKKKKKKKKKKKK 1620
S L +I G KK + ++ K K KKK
Sbjct: 27 SRPALKKFI---KENYPIVGSASNFDLYFNNAIKKGVEAGDFEQPKGPAGAVKLAKKKSP 83
Query: 1621 KKKKKKK 1627
+ KK+K+
Sbjct: 84 EVKKEKE 90
>d2ayua1 d.305.1.1 (A:70-370) Nucleosome assembly protein, NAP
{Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 301
Score = 30.7 bits (69), Expect = 1.4
Identities = 6/35 (17%), Positives = 13/35 (37%)
Query: 1601 KKKKKKYKKKKKKKKKKKKKKKKKKKKKKKKKKYS 1635
K + +K++ K K+ + +K S
Sbjct: 208 KDNAHNVTVDLEMRKQRNKTTKQVRTIEKITPIES 242
Score = 28.1 bits (62), Expect = 9.0
Identities = 6/34 (17%), Positives = 13/34 (38%)
Query: 1604 KKKYKKKKKKKKKKKKKKKKKKKKKKKKKKYSRE 1637
K + +K++ K K+ + +K E
Sbjct: 208 KDNAHNVTVDLEMRKQRNKTTKQVRTIEKITPIE 241
>d1uw0a_ g.39.1.12 (A:) DNA ligase III {Human (Homo sapiens) [TaxId:
9606]}
Length = 117
Score = 29.2 bits (65), Expect = 1.4
Identities = 6/32 (18%), Positives = 12/32 (37%)
Query: 1596 KKKKKKKKKKKYKKKKKKKKKKKKKKKKKKKK 1627
+ +K++ + K KKK + K
Sbjct: 83 EDNEKEQITQHIADLSSKAAGTPKKKAVVQAK 114
Score = 28.0 bits (62), Expect = 4.3
Identities = 6/32 (18%), Positives = 12/32 (37%)
Query: 1593 KKKKKKKKKKKKKKYKKKKKKKKKKKKKKKKK 1624
+ +K++ + K KKK + K
Sbjct: 83 EDNEKEQITQHIADLSSKAAGTPKKKAVVQAK 114
Score = 27.3 bits (60), Expect = 6.5
Identities = 6/32 (18%), Positives = 11/32 (34%)
Query: 1579 RGEKKKKKKKKKKKKKKKKKKKKKKKKKYKKK 1610
+K++ + K KKK + K
Sbjct: 83 EDNEKEQITQHIADLSSKAAGTPKKKAVVQAK 114
Score = 27.3 bits (60), Expect = 7.2
Identities = 6/32 (18%), Positives = 12/32 (37%)
Query: 1600 KKKKKKKYKKKKKKKKKKKKKKKKKKKKKKKK 1631
+ +K++ + K KKK + K
Sbjct: 83 EDNEKEQITQHIADLSSKAAGTPKKKAVVQAK 114
Score = 27.3 bits (60), Expect = 8.1
Identities = 6/32 (18%), Positives = 13/32 (40%)
Query: 1597 KKKKKKKKKKYKKKKKKKKKKKKKKKKKKKKK 1628
+ +K++ ++ K KKK + K
Sbjct: 83 EDNEKEQITQHIADLSSKAAGTPKKKAVVQAK 114
>d1kcfa2 c.55.3.7 (A:39-256) Mitochondrial resolvase ydc2 catalytic
domain {Fission yeast (Schizosaccharomyces pombe) [TaxId:
4896]}
Length = 218
Score = 30.4 bits (68), Expect = 1.5
Identities = 9/48 (18%), Positives = 17/48 (35%)
Query: 1583 KKKKKKKKKKKKKKKKKKKKKKKKYKKKKKKKKKKKKKKKKKKKKKKK 1630
K KKK + + K+ K + ++ K + + KK
Sbjct: 140 VLNTKASFSKKKSRVQMVKELIDGQKILFENEEALYKWNNGSRVEFKK 187
Score = 30.4 bits (68), Expect = 1.6
Identities = 9/49 (18%), Positives = 17/49 (34%)
Query: 1582 KKKKKKKKKKKKKKKKKKKKKKKKKYKKKKKKKKKKKKKKKKKKKKKKK 1630
+K+ ++K + K Y K KKK + + K+
Sbjct: 111 EKRNSIEQKIQYPFLLSLSPKSTYSYWASVLNTKASFSKKKSRVQMVKE 159
Score = 30.0 bits (67), Expect = 1.7
Identities = 8/52 (15%), Positives = 17/52 (32%)
Query: 1582 KKKKKKKKKKKKKKKKKKKKKKKKKYKKKKKKKKKKKKKKKKKKKKKKKKKK 1633
K KKK + + K+ +K + ++ K + + K
Sbjct: 135 SYWASVLNTKASFSKKKSRVQMVKELIDGQKILFENEEALYKWNNGSRVEFK 186
Score = 30.0 bits (67), Expect = 2.0
Identities = 8/49 (16%), Positives = 17/49 (34%)
Query: 1581 EKKKKKKKKKKKKKKKKKKKKKKKKKYKKKKKKKKKKKKKKKKKKKKKK 1629
K KKK + + K+ + + ++ K + + KK
Sbjct: 139 SVLNTKASFSKKKSRVQMVKELIDGQKILFENEEALYKWNNGSRVEFKK 187
Score = 29.7 bits (66), Expect = 2.2
Identities = 10/57 (17%), Positives = 18/57 (31%), Gaps = 5/57 (8%)
Query: 1582 KKKKKKKKKKKKKKKKKKKKKKKKKYKKK-----KKKKKKKKKKKKKKKKKKKKKKK 1633
K K KKK + + K+ K + ++ K + + KK
Sbjct: 131 KSTYSYWASVLNTKASFSKKKSRVQMVKELIDGQKILFENEEALYKWNNGSRVEFKK 187
Score = 29.7 bits (66), Expect = 2.2
Identities = 16/150 (10%), Positives = 43/150 (28%), Gaps = 2/150 (1%)
Query: 1479 PEQFDEEAAGRKYPILYNQSMNTVLKQELIRYNRLTVIIKKSLQEVRQAVKGLIVMSKEL 1538
D + P + ++N +++++ Q R + + + +
Sbjct: 40 KNGLDIQWTEDFQPSSMADLSIQLFNTLHEKFNPHVILMER--QRYRSGIATIPEWTLRV 97
Query: 1539 EEINTSIMFGKIPQAWASKSYPSLKPLGSYIVDLLARREGRGEKKKKKKKKKKKKKKKKK 1598
+ + + + S P + K KKK + +
Sbjct: 98 NMLESMLYALHYAEKRNSIEQKIQYPFLLSLSPKSTYSYWASVLNTKASFSKKKSRVQMV 157
Query: 1599 KKKKKKKKYKKKKKKKKKKKKKKKKKKKKK 1628
K+ +K + ++ K + + KK
Sbjct: 158 KELIDGQKILFENEEALYKWNNGSRVEFKK 187
Score = 28.5 bits (63), Expect = 5.2
Identities = 9/49 (18%), Positives = 17/49 (34%)
Query: 1584 KKKKKKKKKKKKKKKKKKKKKKKYKKKKKKKKKKKKKKKKKKKKKKKKK 1632
+K+ ++K + K Y K KKK + + K+
Sbjct: 111 EKRNSIEQKIQYPFLLSLSPKSTYSYWASVLNTKASFSKKKSRVQMVKE 159
>d2joya1 b.34.5.7 (A:1-96) Ribosomal protein L14e {Sulfolobus
solfataricus [TaxId: 2287]}
Length = 96
Score = 28.5 bits (64), Expect = 1.8
Identities = 9/35 (25%), Positives = 17/35 (48%)
Query: 1593 KKKKKKKKKKKKKKYKKKKKKKKKKKKKKKKKKKK 1627
KK +K ++ KKK ++ + K+K K +
Sbjct: 58 DKKIDIQKGASDEEVKKKLEESNLTEYMKEKIKIR 92
Score = 28.1 bits (63), Expect = 2.2
Identities = 9/35 (25%), Positives = 16/35 (45%)
Query: 1594 KKKKKKKKKKKKKYKKKKKKKKKKKKKKKKKKKKK 1628
KK +K + KKK ++ + K+K K +
Sbjct: 58 DKKIDIQKGASDEEVKKKLEESNLTEYMKEKIKIR 92
Score = 27.4 bits (61), Expect = 4.8
Identities = 9/35 (25%), Positives = 17/35 (48%)
Query: 1598 KKKKKKKKKYKKKKKKKKKKKKKKKKKKKKKKKKK 1632
KK +K ++ KKK ++ + K+K K +
Sbjct: 58 DKKIDIQKGASDEEVKKKLEESNLTEYMKEKIKIR 92
Score = 27.4 bits (61), Expect = 5.0
Identities = 9/35 (25%), Positives = 17/35 (48%)
Query: 1586 KKKKKKKKKKKKKKKKKKKKKYKKKKKKKKKKKKK 1620
KK +K ++ KKK ++ + K+K K +
Sbjct: 58 DKKIDIQKGASDEEVKKKLEESNLTEYMKEKIKIR 92
Score = 27.0 bits (60), Expect = 5.8
Identities = 9/35 (25%), Positives = 17/35 (48%)
Query: 1599 KKKKKKKKYKKKKKKKKKKKKKKKKKKKKKKKKKK 1633
KK +K ++ KKK ++ + K+K K +
Sbjct: 58 DKKIDIQKGASDEEVKKKLEESNLTEYMKEKIKIR 92
Score = 27.0 bits (60), Expect = 6.2
Identities = 9/35 (25%), Positives = 17/35 (48%)
Query: 1589 KKKKKKKKKKKKKKKKKKYKKKKKKKKKKKKKKKK 1623
KK +K ++ KKK ++ + K+K K +
Sbjct: 58 DKKIDIQKGASDEEVKKKLEESNLTEYMKEKIKIR 92
Score = 27.0 bits (60), Expect = 6.4
Identities = 9/35 (25%), Positives = 17/35 (48%)
Query: 1584 KKKKKKKKKKKKKKKKKKKKKKKYKKKKKKKKKKK 1618
KK +K ++ KKK ++ + K+K K +
Sbjct: 58 DKKIDIQKGASDEEVKKKLEESNLTEYMKEKIKIR 92
Score = 27.0 bits (60), Expect = 7.1
Identities = 7/28 (25%), Positives = 15/28 (53%)
Query: 1579 RGEKKKKKKKKKKKKKKKKKKKKKKKKK 1606
+G ++ KKK ++ + K+K K +
Sbjct: 65 KGASDEEVKKKLEESNLTEYMKEKIKIR 92
>d1d7qa_ b.40.4.5 (A:) Translation initiation factor-1a, eIF1a {Human
(Homo sapiens) [TaxId: 9606]}
Length = 143
Score = 29.4 bits (66), Expect = 1.9
Identities = 7/29 (24%), Positives = 16/29 (55%)
Query: 1584 KKKKKKKKKKKKKKKKKKKKKKKYKKKKK 1612
K K K K +++ K + + +K++ K+
Sbjct: 2 KNKGKGGKNRRRGKNENESEKRELVFKED 30
Score = 29.1 bits (65), Expect = 2.6
Identities = 7/30 (23%), Positives = 17/30 (56%)
Query: 1609 KKKKKKKKKKKKKKKKKKKKKKKKKYSREG 1638
K K K K +++ K + + +K++ + +G
Sbjct: 2 KNKGKGGKNRRRGKNENESEKRELVFKEDG 31
Score = 28.7 bits (64), Expect = 3.4
Identities = 7/29 (24%), Positives = 17/29 (58%)
Query: 1582 KKKKKKKKKKKKKKKKKKKKKKKKKYKKK 1610
K K K K +++ K + + +K++ +K+
Sbjct: 2 KNKGKGGKNRRRGKNENESEKRELVFKED 30
Score = 28.3 bits (63), Expect = 4.5
Identities = 7/29 (24%), Positives = 16/29 (55%)
Query: 1583 KKKKKKKKKKKKKKKKKKKKKKKKYKKKK 1611
K K K K +++ K + + +K++ K+
Sbjct: 2 KNKGKGGKNRRRGKNENESEKRELVFKED 30
Score = 28.3 bits (63), Expect = 4.7
Identities = 7/29 (24%), Positives = 15/29 (51%)
Query: 1592 KKKKKKKKKKKKKKKYKKKKKKKKKKKKK 1620
K K K K +++ K + +K++ K+
Sbjct: 2 KNKGKGGKNRRRGKNENESEKRELVFKED 30
Score = 28.3 bits (63), Expect = 4.9
Identities = 7/29 (24%), Positives = 16/29 (55%)
Query: 1591 KKKKKKKKKKKKKKKKYKKKKKKKKKKKK 1619
K K K K +++ K + + +K++ K+
Sbjct: 2 KNKGKGGKNRRRGKNENESEKRELVFKED 30
Score = 27.9 bits (62), Expect = 5.8
Identities = 8/30 (26%), Positives = 17/30 (56%)
Query: 1610 KKKKKKKKKKKKKKKKKKKKKKKKYSREGG 1639
K K K K +++ K + + +K++ +E G
Sbjct: 2 KNKGKGGKNRRRGKNENESEKRELVFKEDG 31
Score = 27.9 bits (62), Expect = 6.0
Identities = 7/29 (24%), Positives = 16/29 (55%)
Query: 1589 KKKKKKKKKKKKKKKKKKYKKKKKKKKKK 1617
K K K K +++ K + + +K++ K+
Sbjct: 2 KNKGKGGKNRRRGKNENESEKRELVFKED 30
Score = 27.9 bits (62), Expect = 6.2
Identities = 8/33 (24%), Positives = 19/33 (57%)
Query: 1602 KKKKKYKKKKKKKKKKKKKKKKKKKKKKKKKKY 1634
K K K K +++ K + + +K++ K+ ++Y
Sbjct: 2 KNKGKGGKNRRRGKNENESEKRELVFKEDGQEY 34
Score = 27.5 bits (61), Expect = 7.7
Identities = 7/29 (24%), Positives = 15/29 (51%)
Query: 1590 KKKKKKKKKKKKKKKKKYKKKKKKKKKKK 1618
K K K K +++ K + +K++ K+
Sbjct: 2 KNKGKGGKNRRRGKNENESEKRELVFKED 30
>d1g99a2 c.55.1.2 (A:198-398) Acetate kinase {Archaeon
Methanosarcina thermophila [TaxId: 2210]}
Length = 201
Score = 29.8 bits (67), Expect = 1.9
Identities = 12/63 (19%), Positives = 23/63 (36%), Gaps = 1/63 (1%)
Query: 328 EKTDQLDKRLKILMNHFTYSIYKNICRSLFEDHKLVFSFVLCTGQGEIAKSYIDEGLKKG 387
E + +++ ++ + F Y + K I + + V G GE + S L
Sbjct: 92 EAASKGNRKAELALEIFAYKVKKFIGEYSAVLNGAD-AVVFTAGIGENSASIRKRILTGL 150
Query: 388 LWI 390
I
Sbjct: 151 DGI 153
>d2uubd1 d.66.1.2 (D:2-209) Ribosomal protein S4 {Thermus thermophilus
[TaxId: 274]}
Length = 208
Score = 29.9 bits (67), Expect = 2.0
Identities = 10/58 (17%), Positives = 25/58 (43%)
Query: 1573 LARREGRGEKKKKKKKKKKKKKKKKKKKKKKKKKYKKKKKKKKKKKKKKKKKKKKKKK 1630
L RREG K ++ K +++ + K+ ++ + ++K+K ++
Sbjct: 10 LCRREGVKLYLKGERCYSPKCAMERRPYPPGQHGQKRARRPSDYAVRLREKQKLRRIY 67
>d1kb2a_ g.39.1.2 (A:) Vitamin D3 receptor, VDR, DNA-binding domain
{Human (Homo sapiens) [TaxId: 9606]}
Length = 89
Score = 28.1 bits (62), Expect = 2.1
Identities = 7/62 (11%), Positives = 23/62 (37%), Gaps = 3/62 (4%)
Query: 1575 RREGRGEKKKKKKKKKKKKKKKKKKKKKKKKKYKK---KKKKKKKKKKKKKKKKKKKKKK 1631
RR + + + K ++ + + K+ K+ ++ ++K++
Sbjct: 28 RRSMKRKALFTCPFNGDCRITKDNRRHCQACRLKRCVDIGMMKEFILTDEEVQRKREMIL 87
Query: 1632 KK 1633
K+
Sbjct: 88 KR 89
>d1ge9a_ d.67.3.1 (A:) Ribosome recycling factor, RRF {Aquifex
aeolicus [TaxId: 63363]}
Length = 184
Score = 29.5 bits (66), Expect = 2.2
Identities = 11/66 (16%), Positives = 26/66 (39%)
Query: 1555 ASKSYPSLKPLGSYIVDLLARREGRGEKKKKKKKKKKKKKKKKKKKKKKKKKYKKKKKKK 1614
+ + RRE + ++ + + +KK+ ++ +K KY + K
Sbjct: 114 ELVRLLHKITEEARVRVRNVRREAKEMIEELEGISEDEKKRALERLQKLTDKYIDEINKL 173
Query: 1615 KKKKKK 1620
+ K+K
Sbjct: 174 MEAKEK 179
>d2py5a2 e.8.1.1 (A:188-575) phi29 DNA polymerase {Bacteriophage
phi-29 [TaxId: 10756]}
Length = 388
Score = 29.8 bits (66), Expect = 2.8
Identities = 12/67 (17%), Positives = 20/67 (29%)
Query: 1575 RREGRGEKKKKKKKKKKKKKKKKKKKKKKKKKYKKKKKKKKKKKKKKKKKKKKKKKKKKY 1634
+ + K+ K + K K K KK+ + K +K K
Sbjct: 311 KTYIQDIYMKEVDGKLVEGSPDDYTDIKFSVKCAGMTDKIKKEVTFENFKVGFSRKMKPK 370
Query: 1635 SREGGGG 1641
+ GG
Sbjct: 371 PVQVPGG 377
Score = 28.3 bits (62), Expect = 8.0
Identities = 8/53 (15%), Positives = 16/53 (30%)
Query: 1584 KKKKKKKKKKKKKKKKKKKKKKKYKKKKKKKKKKKKKKKKKKKKKKKKKKYSR 1636
++K + K+ K + K K K KK+ + +
Sbjct: 309 RQKTYIQDIYMKEVDGKLVEGSPDDYTDIKFSVKCAGMTDKIKKEVTFENFKV 361
>d1lrza1 a.2.7.4 (A:245-309) Methicillin resistance protein FemA
probable tRNA-binding arm {Staphylococcus aureus [TaxId:
1280]}
Length = 65
Score = 26.6 bits (59), Expect = 4.2
Identities = 10/54 (18%), Positives = 29/54 (53%)
Query: 1581 EKKKKKKKKKKKKKKKKKKKKKKKKKYKKKKKKKKKKKKKKKKKKKKKKKKKKY 1634
E++ K K K +K+ + KK + K+ +++ ++K ++ K+ ++++
Sbjct: 10 EERDILNKDLNKALKDIEKRPENKKAHNKRDNLQQQLDANEQKIEEGKRLQEEH 63
Score = 25.8 bits (57), Expect = 8.0
Identities = 14/56 (25%), Positives = 27/56 (48%), Gaps = 3/56 (5%)
Query: 773 MEKLNSKRAQLATVLGKLQAL---RDELAQKSKDKKELEDQIELCKQKLERAEKLI 825
+++LN +R L L K R E + + L+ Q++ +QK+E ++L
Sbjct: 5 IKELNEERDILNKDLNKALKDIEKRPENKKAHNKRDNLQQQLDANEQKIEEGKRLQ 60
>d1mswd_ e.8.1.3 (D:) T7 RNA polymerase {Bacteriophage T7 [TaxId:
10760]}
Length = 882
Score = 29.4 bits (65), Expect = 4.4
Identities = 6/41 (14%), Positives = 16/41 (39%)
Query: 1597 KKKKKKKKKKYKKKKKKKKKKKKKKKKKKKKKKKKKKYSRE 1637
+ + + K +KK +++ K+ KK + +
Sbjct: 151 GRIRDLEAKHFKKNVEEQLNKRVGHVYKKAFMQVVEADMLS 191
>d1wxqa1 c.37.1.8 (A:1-319) GTP-binding protein PH0525 {Pyrococcus
horikoshii [TaxId: 53953]}
Length = 319
Score = 29.1 bits (64), Expect = 4.5
Identities = 9/74 (12%), Positives = 24/74 (32%)
Query: 1562 LKPLGSYIVDLLARREGRGEKKKKKKKKKKKKKKKKKKKKKKKKKYKKKKKKKKKKKKKK 1621
+ + +I +L++ + K+ K +K K + + + + K +
Sbjct: 135 EREIDYWIYGILSKGWDKFAKRIKLQKIKLESAIAEHLSGIGVNENDVWEAMHKLNLPED 194
Query: 1622 KKKKKKKKKKKKYS 1635
K + S
Sbjct: 195 PTKWSQDDLLAFAS 208
>d1vqop1 a.94.1.1 (P:1-143) Ribosomal protein L19 (L19e) {Archaeon
Haloarcula marismortui [TaxId: 2238]}
Length = 143
Score = 28.2 bits (63), Expect = 5.4
Identities = 10/59 (16%), Positives = 28/59 (47%)
Query: 1579 RGEKKKKKKKKKKKKKKKKKKKKKKKKKYKKKKKKKKKKKKKKKKKKKKKKKKKKYSRE 1637
RG ++++KK+ +K +K K + K+ + + + ++ K ++ + + S
Sbjct: 59 RGRARERQKKRAYGHQKGAGSRKGKAGARQNSKEDWESRIRAQRTKLRELRDEGTLSSS 117
Score = 27.8 bits (62), Expect = 7.3
Identities = 9/38 (23%), Positives = 20/38 (52%)
Query: 1599 KKKKKKKKYKKKKKKKKKKKKKKKKKKKKKKKKKKYSR 1636
+ K KK + + ++++KK+ +K +K K +R
Sbjct: 50 QAKDKKGNSRGRARERQKKRAYGHQKGAGSRKGKAGAR 87
>d1owxa_ d.58.7.1 (A:) Lupus LA protein {Human (Homo sapiens) [TaxId:
9606]}
Length = 113
Score = 27.5 bits (60), Expect = 5.9
Identities = 6/29 (20%), Positives = 16/29 (55%)
Query: 1584 KKKKKKKKKKKKKKKKKKKKKKKYKKKKK 1612
+ + +K+ KK + +++ K+K K +
Sbjct: 85 LEGEVEKEALKKIIEDQQESLNKWKSKGR 113
>d1n1ba2 a.128.1.3 (A:271-598) (+)-bornyl diphosphate synthase
{Garden sage (Salvia officinalis) [TaxId: 38868]}
Length = 328
Score = 28.7 bits (64), Expect = 6.0
Identities = 25/146 (17%), Positives = 47/146 (32%), Gaps = 19/146 (13%)
Query: 76 GHAMLITIGGSGAAEVTKLATFMNEYVLFEIEILKTYGLTDWRDDLCRLM--------KK 127
A++ + A A + + +IL G+ RL +
Sbjct: 184 SPAIISPTYFTFANASHDTAVI--DSLYQYHDILCLAGII------LRLPDDLGTSYFEL 235
Query: 128 SGGKDAKPMTFLFSDTQIQNEVFVEHINMLLNTARKRYNMDLTKSYGVCPSMSIVHHLED 187
+ G K + +T E VEH+ L+ A K N + Y +V +
Sbjct: 236 ARGDVPKTIQCYMKETNASEEEAVEHVKFLIREAWKDMNTAIAAGYPF--PDGMVAGAAN 293
Query: 188 L-NASPLVYDEIDNLDLLTEKINQYI 212
+ + +Y D + K ++I
Sbjct: 294 IGRVAQFIYLHGDGFGVQHSKTYEHI 319
>d2b2ya2 b.34.13.2 (A:13-107) ATP-dependent helicase CHD1 (Chromo
domain protein 1) {Human (Homo sapiens) [TaxId: 9606]}
Length = 95
Score = 26.8 bits (59), Expect = 6.5
Identities = 9/26 (34%), Positives = 15/26 (57%)
Query: 1594 KKKKKKKKKKKKKYKKKKKKKKKKKK 1619
K++ + KK YKKK ++ K+ K
Sbjct: 69 KQQNVRGMKKLDNYKKKDQETKRWLK 94
>d2elba1 a.238.1.1 (A:6-273) DCC-interacting protein 13-alpha, APPL1
{Human (Homo sapiens) [TaxId: 9606]}
Length = 268
Score = 28.5 bits (63), Expect = 6.7
Identities = 9/56 (16%), Positives = 20/56 (35%)
Query: 1579 RGEKKKKKKKKKKKKKKKKKKKKKKKKKYKKKKKKKKKKKKKKKKKKKKKKKKKKY 1634
+ K+ K+ + +Y + KK++ K K + + +KK
Sbjct: 114 KERDLKEILTLKEVFQIASNDHDAAINRYSRLSKKRENDKVKYEVTEDVYTSRKKQ 169
>d1owfa_ a.55.1.1 (A:) Integration host factor alpha subunit (IHFA)
{Escherichia coli [TaxId: 562]}
Length = 96
Score = 27.1 bits (60), Expect = 6.7
Identities = 14/80 (17%), Positives = 31/80 (38%)
Query: 1534 MSKELEEINTSIMFGKIPQAWASKSYPSLKPLGSYIVDLLARREGRGEKKKKKKKKKKKK 1593
+SK + + F +I +A + L G++ + +R GR K + ++
Sbjct: 17 LSKRDAKELVELFFEEIRRALENGEQVKLSGFGNFDLRDKNQRPGRNPKTGEDIPITARR 76
Query: 1594 KKKKKKKKKKKKKYKKKKKK 1613
+ +K K + + K
Sbjct: 77 VVTFRPGQKLKSRVENASPK 96
>d1p5qa1 a.118.8.1 (A:258-427) FKBP52 (FKBP4), C-terminal domain
{Human (Homo sapiens) [TaxId: 9606]}
Length = 170
Score = 28.1 bits (61), Expect = 6.8
Identities = 6/37 (16%), Positives = 20/37 (54%)
Query: 1586 KKKKKKKKKKKKKKKKKKKKKYKKKKKKKKKKKKKKK 1622
K + +++ +++ ++KK Y ++ +++ K K
Sbjct: 133 KTQLAVCQQRIRRQLAREKKLYANMFERLAEEENKAK 169
>d2j01d1 b.34.5.3 (D:127-273) C-terminal domain of ribosomal protein
L2 {Thermus thermophilus [TaxId: 274]}
Length = 147
Score = 27.5 bits (61), Expect = 7.5
Identities = 6/33 (18%), Positives = 13/33 (39%)
Query: 1578 GRGEKKKKKKKKKKKKKKKKKKKKKKKKKYKKK 1610
G G + + + K K +K++K +
Sbjct: 110 GEGRAPRGRPPASPWGWQTKGLKTRKRRKPSSR 142
Score = 27.1 bits (60), Expect = 9.9
Identities = 8/70 (11%), Positives = 21/70 (30%), Gaps = 12/70 (17%)
Query: 1578 GRGEKKKKKKKKKKKKKKKKKK------------KKKKKKKYKKKKKKKKKKKKKKKKKK 1625
G + K K + + ++ + + + + + K
Sbjct: 71 GNADHKNIVLGKAGRSRWLGRRPHVRGAAMNPVDHPHGGGEGRAPRGRPPASPWGWQTKG 130
Query: 1626 KKKKKKKKYS 1635
K +K++K S
Sbjct: 131 LKTRKRRKPS 140
>d1wiia_ g.41.3.4 (A:) Hypothetical UPF0222 protein MGC4549 {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 85
Score = 26.6 bits (59), Expect = 7.9
Identities = 4/18 (22%), Positives = 5/18 (27%)
Query: 1591 KKKKKKKKKKKKKKKKYK 1608
+K KKK
Sbjct: 2 SSGSSGRKPPPKKKMTGT 19
>d1bjta_ e.11.1.1 (A:) DNA topoisomerase II, C-terminal fragment
(residues 410-1202) {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 760
Score = 28.6 bits (63), Expect = 8.0
Identities = 9/53 (16%), Positives = 24/53 (45%)
Query: 1587 KKKKKKKKKKKKKKKKKKKKYKKKKKKKKKKKKKKKKKKKKKKKKKKYSREGG 1639
K++ +K K+K++K+ + + K K K + ++ ++ + G
Sbjct: 708 KERYQKLLKQKQEKETELENLLKLSAKDIWNTDLKAFEVGYQEFLQRDAEARG 760
>d1yz1a1 b.88.1.2 (A:1-172) Translationally controlled tumor protein
TCTP (histamine-releasing factor) {Human (Homo sapiens)
[TaxId: 9606]}
Length = 172
Score = 27.8 bits (62), Expect = 8.8
Identities = 9/36 (25%), Positives = 17/36 (47%)
Query: 1597 KKKKKKKKKKYKKKKKKKKKKKKKKKKKKKKKKKKK 1632
K+ KK K Y K K K ++++ ++ K +
Sbjct: 85 KEAYKKYIKDYMKSIKGKLEEQRPERVKPFMTGAAE 120
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.318 0.135 0.390
Gapped
Lambda K H
0.267 0.0634 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 6,113,614
Number of extensions: 308227
Number of successful extensions: 4337
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2994
Number of HSP's successfully gapped: 412
Length of query: 1650
Length of database: 2,407,596
Length adjustment: 98
Effective length of query: 1552
Effective length of database: 1,062,056
Effective search space: 1648310912
Effective search space used: 1648310912
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (26.7 bits)