BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy4728
(214 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2JNF|A Chain A, Solution Structure Of Fly Troponin C, Isoform F1
Length = 158
Score = 98.6 bits (244), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 51/112 (45%), Positives = 75/112 (66%), Gaps = 1/112 (0%)
Query: 2 VGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTLXXXXXXXXXXXXXXXXXXLR 61
+G I+E+LG Q++ + ++I E D G+G+++F+ F + LR
Sbjct: 36 IGIILEVLGIQQTKSTIRQLIDEFDPFGNGDIDFDSF-KIIGARFLGEEVNPEQMQQELR 94
Query: 62 EAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDF 113
EAF LYD+EGNGYI+TDV+REI++ELD L E+L+ MI+EID+DGSGT+DF
Sbjct: 95 EAFRLYDKEGNGYISTDVMREILAELDETLSSEDLDAMIDEIDADGSGTVDF 146
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 60/124 (48%), Gaps = 21/124 (16%)
Query: 70 EGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDFDV-------------- 115
EG+G ++TD + I+ L + ++I+E D G+G IDFD
Sbjct: 26 EGSGRVSTDQIGIILEVLGIQQTKSTIRQLIDEFDPFGNGDIDFDSFKIIGARFLGEEVN 85
Query: 116 -------LTRAFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDEDGSGELE 168
L AF +D+E G I TD++ I+ L S E L+ +I E+D DGSG ++
Sbjct: 86 PEQMQQELREAFRLYDKEGNGYISTDVMREILAELDETLSSEDLDAMIDEIDADGSGTVD 145
Query: 169 FNEF 172
F EF
Sbjct: 146 FEEF 149
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 51/100 (51%), Gaps = 2/100 (2%)
Query: 115 VLTRAFEAFDQ-EKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFC 173
+L AF F+ E G + TD +G I+E+LG Q++ + ++I E D G+G+++F+ F
Sbjct: 14 LLETAFRDFETPEGSGRVSTDQIGIILEVLGIQQTKSTIRQLIDEFDPFGNGDIDFDSF- 72
Query: 174 TLXXXXXXXXXXXXXXXXXXLREAFMLYDREEFMSIMIDV 213
+ LREAF LYD+E I DV
Sbjct: 73 KIIGARFLGEEVNPEQMQQELREAFRLYDKEGNGYISTDV 112
Score = 28.9 bits (63), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 21/34 (61%)
Query: 5 IMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEF 38
I+ L S E L+ +I E+D DGSG ++F EF
Sbjct: 116 ILAELDETLSSEDLDAMIDEIDADGSGTVDFEEF 149
>pdb|2L1W|A Chain A, The Solution Structure Of Soybean Calmodulin Isoform 4
Complexed With The Vacuolar Calcium Atpase Bca1 Peptide
Length = 149
Score = 83.6 bits (205), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 48/133 (36%), Positives = 74/133 (55%), Gaps = 17/133 (12%)
Query: 60 LREAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDFD----- 114
+EAF L+D++G+G IT + L +I LD N EEL +MI E+D+DG+GTI+FD
Sbjct: 12 FKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEFDEFLSL 71
Query: 115 ------------VLTRAFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDED 162
L AF+ FD+++ G I + +M LG + E + ++IKE D D
Sbjct: 72 MAKKVKDTDAEEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLD 131
Query: 163 GSGELEFNEFCTL 175
G G++ + EF +
Sbjct: 132 GDGQVNYEEFVKM 144
Score = 70.1 bits (170), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 65/117 (55%), Gaps = 5/117 (4%)
Query: 2 VGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTLXXXXXXXXXXXXXXXXXXLR 61
+ T++ L ++E L ++I EVD DG+G +EF+EF +L L+
Sbjct: 32 LATVIRSLDQNPTEEELQDMISEVDADGNGTIEFDEFLSLMAKKVKDTDAEEE-----LK 86
Query: 62 EAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDFDVLTR 118
EAF ++D++ NGYI+ LR ++ L L EE+ +MI+E D DG G ++++ +
Sbjct: 87 EAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEFVK 143
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 47/87 (54%), Gaps = 5/87 (5%)
Query: 119 AFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTLXXX 178
AF FD++ G I + + T++ L ++E L ++I EVD DG+G +EF+EF +L
Sbjct: 15 AFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEFDEFLSL--- 71
Query: 179 XXXXXXXXXXXXXXXLREAFMLYDREE 205
L+EAF ++D+++
Sbjct: 72 --MAKKVKDTDAEEELKEAFKVFDKDQ 96
>pdb|2K2A|A Chain A, Solution Structure Of The Apo C Terminal Domain Of
Lethoceru C Isoform F1
Length = 70
Score = 82.8 bits (203), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 38/54 (70%), Positives = 48/54 (88%)
Query: 60 LREAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDF 113
LREAF LYD+EGNGYI+TDV+REI++ELD L E+L+ MI+EID+DGSGT+DF
Sbjct: 5 LREAFRLYDKEGNGYISTDVMREILAELDETLSSEDLDAMIDEIDADGSGTVDF 58
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 34/57 (59%)
Query: 116 LTRAFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEF 172
L AF +D+E G I TD++ I+ L S E L+ +I E+D DGSG ++F EF
Sbjct: 5 LREAFRLYDKEGNGYISTDVMREILAELDETLSSEDLDAMIDEIDADGSGTVDFEEF 61
Score = 29.3 bits (64), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 21/34 (61%)
Query: 5 IMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEF 38
I+ L S E L+ +I E+D DGSG ++F EF
Sbjct: 28 ILAELDETLSSEDLDAMIDEIDADGSGTVDFEEF 61
>pdb|1RFJ|A Chain A, Crystal Structure Of Potato Calmodulin Pcm6
Length = 149
Score = 80.1 bits (196), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 73/133 (54%), Gaps = 17/133 (12%)
Query: 60 LREAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDF------ 113
+EAF L+D++G+G ITT L ++ L N EL +MI E+D+DG+GTIDF
Sbjct: 13 FKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNL 72
Query: 114 -----------DVLTRAFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDED 162
+ L AF FD+++ G I + +M LG + E ++E+I+E D D
Sbjct: 73 MARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVD 132
Query: 163 GSGELEFNEFCTL 175
G G++ ++EF +
Sbjct: 133 GDGQINYDEFVKV 145
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 66/121 (54%), Gaps = 5/121 (4%)
Query: 2 VGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTLXXXXXXXXXXXXXXXXXXLR 61
+GT+M LG ++ L ++I EVD DG+G ++F EF L L+
Sbjct: 33 LGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEE-----LK 87
Query: 62 EAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDFDVLTRAFE 121
EAF ++D++ NG+I+ LR +++ L L EE++EMI E D DG G I++D +
Sbjct: 88 EAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYDEFVKVMM 147
Query: 122 A 122
A
Sbjct: 148 A 148
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 5/87 (5%)
Query: 119 AFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTLXXX 178
AF FD++ G I T +GT+M LG ++ L ++I EVD DG+G ++F EF L
Sbjct: 16 AFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNL--- 72
Query: 179 XXXXXXXXXXXXXXXLREAFMLYDREE 205
L+EAF ++D+++
Sbjct: 73 --MARKMKDTDSEEELKEAFRVFDKDQ 97
>pdb|1AHR|A Chain A, Calmodulin Mutant With A Two Residue Deletion In The
Central Helix
Length = 146
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 72/131 (54%), Gaps = 15/131 (11%)
Query: 60 LREAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDF------ 113
+EAF L+D++G+G ITT L ++ L N EL +MI E+D+DG+GTIDF
Sbjct: 12 FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM 71
Query: 114 ---------DVLTRAFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDEDGS 164
+ + AF FD++ G I + +M LG + E ++E+I+E D DG
Sbjct: 72 MARKMKDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGD 131
Query: 165 GELEFNEFCTL 175
G++ + EF T+
Sbjct: 132 GQVNYEEFVTM 142
Score = 77.0 bits (188), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 65/112 (58%), Gaps = 7/112 (6%)
Query: 2 VGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTLXXXXXXXXXXXXXXXXXXLR 61
+GT+M LG ++ L ++I EVD DG+G ++F EF T+ +R
Sbjct: 32 LGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDSEEE-------IR 84
Query: 62 EAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDF 113
EAF ++D++GNG+I+ LR +++ L L EE++EMI E D DG G +++
Sbjct: 85 EAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNY 136
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 46/110 (41%), Gaps = 27/110 (24%)
Query: 95 ELNEMIEEIDSDGSGTIDFDVLTRAFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNE 154
E E D DG GT I T +GT+M LG ++ L +
Sbjct: 11 EFKEAFSLFDKDGDGT--------------------ITTKELGTVMRSLGQNPTEAELQD 50
Query: 155 IIKEVDEDGSGELEFNEFCTLXXXXXXXXXXXXXXXXXXLREAFMLYDRE 204
+I EVD DG+G ++F EF T+ +REAF ++D++
Sbjct: 51 MINEVDADGNGTIDFPEFLTM-------MARKMKDSEEEIREAFRVFDKD 93
Score = 32.7 bits (73), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 24/37 (64%)
Query: 5 IMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTL 41
+M LG + E ++E+I+E D DG G++ + EF T+
Sbjct: 106 VMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTM 142
>pdb|4AQR|A Chain A, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
pdb|4AQR|B Chain B, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
Length = 149
Score = 79.3 bits (194), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 72/133 (54%), Gaps = 17/133 (12%)
Query: 60 LREAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDF------ 113
+EAF L+D++G+G ITT L ++ L N EL +MI E+D+DG+GTIDF
Sbjct: 13 FKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNL 72
Query: 114 -----------DVLTRAFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDED 162
+ L AF FD+++ G I + +M LG + E ++E+I+E D D
Sbjct: 73 MARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVD 132
Query: 163 GSGELEFNEFCTL 175
G G++ + EF +
Sbjct: 133 GDGQINYEEFVKV 145
Score = 73.6 bits (179), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 66/121 (54%), Gaps = 5/121 (4%)
Query: 2 VGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTLXXXXXXXXXXXXXXXXXXLR 61
+GT+M LG ++ L ++I EVD DG+G ++F EF L L+
Sbjct: 33 LGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEE-----LK 87
Query: 62 EAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDFDVLTRAFE 121
EAF ++D++ NG+I+ LR +++ L L EE++EMI E D DG G I+++ +
Sbjct: 88 EAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMM 147
Query: 122 A 122
A
Sbjct: 148 A 148
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 5/87 (5%)
Query: 119 AFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTLXXX 178
AF FD++ G I T +GT+M LG ++ L ++I EVD DG+G ++F EF L
Sbjct: 16 AFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNL--- 72
Query: 179 XXXXXXXXXXXXXXXLREAFMLYDREE 205
L+EAF ++D+++
Sbjct: 73 --MARKMKDTDSEEELKEAFRVFDKDQ 97
>pdb|2F2O|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2O|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
Length = 179
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 66/113 (58%), Gaps = 5/113 (4%)
Query: 2 VGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTLXXXXXXXXXXXXXXXXXXLR 61
+GT+M LG ++ L ++I EVD DG+G ++F EF T+ +R
Sbjct: 33 LGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEE-----IR 87
Query: 62 EAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDFD 114
EAF ++D++GNGYI+ LR +++ L L EE++EMI E D DG G ++++
Sbjct: 88 EAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 140
Score = 77.4 bits (189), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 71/133 (53%), Gaps = 17/133 (12%)
Query: 60 LREAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDF------ 113
+EAF L+D++G+G ITT L ++ L N EL +MI E+D+DG+GTIDF
Sbjct: 13 FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM 72
Query: 114 -----------DVLTRAFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDED 162
+ + AF FD++ G I + +M LG + E ++E+I+E D D
Sbjct: 73 MARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADID 132
Query: 163 GSGELEFNEFCTL 175
G G++ + EF +
Sbjct: 133 GDGQVNYEEFVQM 145
Score = 54.3 bits (129), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 47/86 (54%), Gaps = 5/86 (5%)
Query: 119 AFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTLXXX 178
AF FD++ G+I T +GT+M LG ++ L ++I EVD DG+G ++F EF T+
Sbjct: 16 AFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM--- 72
Query: 179 XXXXXXXXXXXXXXXLREAFMLYDRE 204
+REAF ++D++
Sbjct: 73 --MARKMKDTDSEEEIREAFRVFDKD 96
>pdb|2LV6|A Chain A, The Complex Between Ca-calmodulin And Skeletal Muscle
Myosin Light Chain Kinase From Combination Of Nmr And
Aqueous And Contrast-matched Saxs Data
Length = 148
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 72/133 (54%), Gaps = 17/133 (12%)
Query: 60 LREAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDF------ 113
+EAF L+D++G+G ITT L ++ L N EL +MI E+D+DG+GTIDF
Sbjct: 12 FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM 71
Query: 114 -----------DVLTRAFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDED 162
+ + AF FD++ G I + +M LG + E ++E+I+E D D
Sbjct: 72 MARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADID 131
Query: 163 GSGELEFNEFCTL 175
G G++ + EF T+
Sbjct: 132 GDGQVNYEEFVTM 144
Score = 77.0 bits (188), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 65/112 (58%), Gaps = 5/112 (4%)
Query: 2 VGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTLXXXXXXXXXXXXXXXXXXLR 61
+GT+M LG ++ L ++I EVD DG+G ++F EF T+ +R
Sbjct: 32 LGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEE-----IR 86
Query: 62 EAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDF 113
EAF ++D++GNG+I+ LR +++ L L EE++EMI E D DG G +++
Sbjct: 87 EAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNY 138
Score = 43.5 bits (101), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 46/110 (41%), Gaps = 25/110 (22%)
Query: 95 ELNEMIEEIDSDGSGTIDFDVLTRAFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNE 154
E E D DG GT I T +GT+M LG ++ L +
Sbjct: 11 EFKEAFSLFDKDGDGT--------------------ITTKELGTVMRSLGQNPTEAELQD 50
Query: 155 IIKEVDEDGSGELEFNEFCTLXXXXXXXXXXXXXXXXXXLREAFMLYDRE 204
+I EVD DG+G ++F EF T+ +REAF ++D++
Sbjct: 51 MINEVDADGNGTIDFPEFLTM-----MARKMKDTDSEEEIREAFRVFDKD 95
Score = 32.7 bits (73), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 24/37 (64%)
Query: 5 IMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTL 41
+M LG + E ++E+I+E D DG G++ + EF T+
Sbjct: 108 VMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTM 144
>pdb|2BKH|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure
pdb|2VAS|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigor State
pdb|3GN4|B Chain B, Myosin Lever Arm
pdb|3GN4|D Chain D, Myosin Lever Arm
pdb|3GN4|F Chain F, Myosin Lever Arm
pdb|3GN4|H Chain H, Myosin Lever Arm
pdb|3L9I|C Chain C, Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant Crystal
Structure
pdb|2X51|B Chain B, M6 Delta Insert1
pdb|4ANJ|B Chain B, Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke State
(Mg.Adp.Alf4)
pdb|4DBP|C Chain C, Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal
Structure
pdb|4DBQ|B Chain B, Myosin Vi D179y (md-insert2-cam, Delta-insert1) Post-rigor
State
Length = 149
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 72/133 (54%), Gaps = 17/133 (12%)
Query: 60 LREAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDF------ 113
+EAF L+D++G+G ITT L ++ L N EL +MI E+D+DG+GTIDF
Sbjct: 13 FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM 72
Query: 114 -----------DVLTRAFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDED 162
+ + AF FD++ G I + +M LG + E ++E+I+E D D
Sbjct: 73 MARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADID 132
Query: 163 GSGELEFNEFCTL 175
G G++ + EF T+
Sbjct: 133 GDGQVNYEEFVTM 145
Score = 77.0 bits (188), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 65/112 (58%), Gaps = 5/112 (4%)
Query: 2 VGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTLXXXXXXXXXXXXXXXXXXLR 61
+GT+M LG ++ L ++I EVD DG+G ++F EF T+ +R
Sbjct: 33 LGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEE-----IR 87
Query: 62 EAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDF 113
EAF ++D++GNG+I+ LR +++ L L EE++EMI E D DG G +++
Sbjct: 88 EAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNY 139
Score = 43.5 bits (101), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 46/110 (41%), Gaps = 25/110 (22%)
Query: 95 ELNEMIEEIDSDGSGTIDFDVLTRAFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNE 154
E E D DG GT I T +GT+M LG ++ L +
Sbjct: 12 EFKEAFSLFDKDGDGT--------------------ITTKELGTVMRSLGQNPTEAELQD 51
Query: 155 IIKEVDEDGSGELEFNEFCTLXXXXXXXXXXXXXXXXXXLREAFMLYDRE 204
+I EVD DG+G ++F EF T+ +REAF ++D++
Sbjct: 52 MINEVDADGNGTIDFPEFLTM-----MARKMKDTDSEEEIREAFRVFDKD 96
Score = 32.7 bits (73), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 24/37 (64%)
Query: 5 IMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTL 41
+M LG + E ++E+I+E D DG G++ + EF T+
Sbjct: 109 VMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTM 145
>pdb|2BBM|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|2BBN|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|1MXE|A Chain A, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|1MXE|B Chain B, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|4CLN|A Chain A, Structure Of A Recombinant Calmodulin From Drosophila
Melanogaster Refined At 2.2-Angstroms Resolution
Length = 148
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 72/133 (54%), Gaps = 17/133 (12%)
Query: 60 LREAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDF------ 113
+EAF L+D++G+G ITT L ++ L N EL +MI E+D+DG+GTIDF
Sbjct: 12 FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM 71
Query: 114 -----------DVLTRAFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDED 162
+ + AF FD++ G I + +M LG + E ++E+I+E D D
Sbjct: 72 MARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADID 131
Query: 163 GSGELEFNEFCTL 175
G G++ + EF T+
Sbjct: 132 GDGQVNYEEFVTM 144
Score = 77.0 bits (188), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 65/112 (58%), Gaps = 5/112 (4%)
Query: 2 VGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTLXXXXXXXXXXXXXXXXXXLR 61
+GT+M LG ++ L ++I EVD DG+G ++F EF T+ +R
Sbjct: 32 LGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEE-----IR 86
Query: 62 EAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDF 113
EAF ++D++GNG+I+ LR +++ L L EE++EMI E D DG G +++
Sbjct: 87 EAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNY 138
Score = 43.5 bits (101), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 46/110 (41%), Gaps = 25/110 (22%)
Query: 95 ELNEMIEEIDSDGSGTIDFDVLTRAFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNE 154
E E D DG GT I T +GT+M LG ++ L +
Sbjct: 11 EFKEAFSLFDKDGDGT--------------------ITTKELGTVMRSLGQNPTEAELQD 50
Query: 155 IIKEVDEDGSGELEFNEFCTLXXXXXXXXXXXXXXXXXXLREAFMLYDRE 204
+I EVD DG+G ++F EF T+ +REAF ++D++
Sbjct: 51 MINEVDADGNGTIDFPEFLTM-----MARKMKDTDSEEEIREAFRVFDKD 95
Score = 32.7 bits (73), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 24/37 (64%)
Query: 5 IMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTL 41
+M LG + E ++E+I+E D DG G++ + EF T+
Sbjct: 108 VMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTM 144
>pdb|2YGG|B Chain B, Complex Of Cambr And Cam
Length = 150
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 65/112 (58%), Gaps = 5/112 (4%)
Query: 2 VGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTLXXXXXXXXXXXXXXXXXXLR 61
+GT+M LG ++ L ++I EVD DG+G ++F EF T+ +R
Sbjct: 33 LGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEE-----IR 87
Query: 62 EAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDF 113
EAF ++D++GNGYI+ LR +++ L L EE++EMI E D DG G +++
Sbjct: 88 EAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNY 139
Score = 77.4 bits (189), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 71/133 (53%), Gaps = 17/133 (12%)
Query: 60 LREAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDF------ 113
+EAF L+D++G+G ITT L ++ L N EL +MI E+D+DG+GTIDF
Sbjct: 13 FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM 72
Query: 114 -----------DVLTRAFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDED 162
+ + AF FD++ G I + +M LG + E ++E+I+E D D
Sbjct: 73 MARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADID 132
Query: 163 GSGELEFNEFCTL 175
G G++ + EF +
Sbjct: 133 GDGQVNYEEFVQM 145
Score = 54.3 bits (129), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 47/86 (54%), Gaps = 5/86 (5%)
Query: 119 AFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTLXXX 178
AF FD++ G+I T +GT+M LG ++ L ++I EVD DG+G ++F EF T+
Sbjct: 16 AFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM--- 72
Query: 179 XXXXXXXXXXXXXXXLREAFMLYDRE 204
+REAF ++D++
Sbjct: 73 --MARKMKDTDSEEEIREAFRVFDKD 96
>pdb|2WEL|D Chain D, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 150
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 65/112 (58%), Gaps = 5/112 (4%)
Query: 2 VGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTLXXXXXXXXXXXXXXXXXXLR 61
+GT+M LG ++ L ++I EVD DG+G ++F EF T+ +R
Sbjct: 34 LGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEE-----IR 88
Query: 62 EAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDF 113
EAF ++D++GNGYI+ LR +++ L L EE++EMI E D DG G +++
Sbjct: 89 EAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNY 140
Score = 77.4 bits (189), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 71/133 (53%), Gaps = 17/133 (12%)
Query: 60 LREAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDF------ 113
+EAF L+D++G+G ITT L ++ L N EL +MI E+D+DG+GTIDF
Sbjct: 14 FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM 73
Query: 114 -----------DVLTRAFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDED 162
+ + AF FD++ G I + +M LG + E ++E+I+E D D
Sbjct: 74 MARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADID 133
Query: 163 GSGELEFNEFCTL 175
G G++ + EF +
Sbjct: 134 GDGQVNYEEFVQM 146
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 47/86 (54%), Gaps = 5/86 (5%)
Query: 119 AFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTLXXX 178
AF FD++ G+I T +GT+M LG ++ L ++I EVD DG+G ++F EF T+
Sbjct: 17 AFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM--- 73
Query: 179 XXXXXXXXXXXXXXXLREAFMLYDRE 204
+REAF ++D++
Sbjct: 74 --MARKMKDTDSEEEIREAFRVFDKD 97
>pdb|1OOJ|A Chain A, Structural Genomics Of Caenorhabditis Elegans : Calmodulin
Length = 149
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 72/133 (54%), Gaps = 17/133 (12%)
Query: 60 LREAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDF------ 113
+EAF L+D++G+G ITT L ++ L N EL +MI E+D+DG+GTIDF
Sbjct: 13 FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM 72
Query: 114 -----------DVLTRAFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDED 162
+ + AF FD++ G I + +M LG + E ++E+I+E D D
Sbjct: 73 MARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADID 132
Query: 163 GSGELEFNEFCTL 175
G G++ + EF T+
Sbjct: 133 GDGQVNYEEFVTM 145
Score = 77.0 bits (188), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 65/112 (58%), Gaps = 5/112 (4%)
Query: 2 VGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTLXXXXXXXXXXXXXXXXXXLR 61
+GT+M LG ++ L ++I EVD DG+G ++F EF T+ +R
Sbjct: 33 LGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEE-----IR 87
Query: 62 EAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDF 113
EAF ++D++GNG+I+ LR +++ L L EE++EMI E D DG G +++
Sbjct: 88 EAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNY 139
Score = 43.5 bits (101), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 46/110 (41%), Gaps = 25/110 (22%)
Query: 95 ELNEMIEEIDSDGSGTIDFDVLTRAFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNE 154
E E D DG GT I T +GT+M LG ++ L +
Sbjct: 12 EFKEAFSLFDKDGDGT--------------------ITTKELGTVMRSLGQNPTEAELQD 51
Query: 155 IIKEVDEDGSGELEFNEFCTLXXXXXXXXXXXXXXXXXXLREAFMLYDRE 204
+I EVD DG+G ++F EF T+ +REAF ++D++
Sbjct: 52 MINEVDADGNGTIDFPEFLTM-----MARKMKDTDSEEEIREAFRVFDKD 96
Score = 32.7 bits (73), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 24/37 (64%)
Query: 5 IMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTL 41
+M LG + E ++E+I+E D DG G++ + EF T+
Sbjct: 109 VMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTM 145
>pdb|1VRK|A Chain A, The 1.9 Angstrom Structure Of E84k-Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 71/133 (53%), Gaps = 17/133 (12%)
Query: 60 LREAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDF------ 113
+EAF L+D++G+G ITT L ++ L N EL +MI E+D+DG+GTIDF
Sbjct: 12 FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNL 71
Query: 114 -----------DVLTRAFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDED 162
+ L AF FD++ G I + +M LG + E ++E+I+E D D
Sbjct: 72 MARKMKDTDSEEKLKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVD 131
Query: 163 GSGELEFNEFCTL 175
G G++ + EF +
Sbjct: 132 GDGQVNYEEFVQV 144
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 64/112 (57%), Gaps = 5/112 (4%)
Query: 2 VGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTLXXXXXXXXXXXXXXXXXXLR 61
+GT+M LG ++ L ++I EVD DG+G ++F EF L L+
Sbjct: 32 LGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEK-----LK 86
Query: 62 EAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDF 113
EAF ++D++GNG+I+ LR +++ L L EE++EMI E D DG G +++
Sbjct: 87 EAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQVNY 138
Score = 53.5 bits (127), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 5/86 (5%)
Query: 119 AFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTLXXX 178
AF FD++ G+I T +GT+M LG ++ L ++I EVD DG+G ++F EF L
Sbjct: 15 AFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNL--- 71
Query: 179 XXXXXXXXXXXXXXXLREAFMLYDRE 204
L+EAF ++D++
Sbjct: 72 --MARKMKDTDSEEKLKEAFRVFDKD 95
>pdb|1Y0V|H Chain H, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|I Chain I, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|J Chain J, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|K Chain K, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|L Chain L, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|M Chain M, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
Length = 146
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 65/112 (58%), Gaps = 5/112 (4%)
Query: 2 VGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTLXXXXXXXXXXXXXXXXXXLR 61
+GT+M LG ++ L ++I EVD DG+G ++F EF T+ +R
Sbjct: 30 LGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEE-----IR 84
Query: 62 EAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDF 113
EAF ++D++GNGYI+ LR +++ L L EE++EMI E D DG G +++
Sbjct: 85 EAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNY 136
Score = 77.4 bits (189), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 71/133 (53%), Gaps = 17/133 (12%)
Query: 60 LREAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDF------ 113
+EAF L+D++G+G ITT L ++ L N EL +MI E+D+DG+GTIDF
Sbjct: 10 FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM 69
Query: 114 -----------DVLTRAFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDED 162
+ + AF FD++ G I + +M LG + E ++E+I+E D D
Sbjct: 70 MARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADID 129
Query: 163 GSGELEFNEFCTL 175
G G++ + EF +
Sbjct: 130 GDGQVNYEEFVQM 142
Score = 54.3 bits (129), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 47/86 (54%), Gaps = 5/86 (5%)
Query: 119 AFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTLXXX 178
AF FD++ G+I T +GT+M LG ++ L ++I EVD DG+G ++F EF T+
Sbjct: 13 AFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM--- 69
Query: 179 XXXXXXXXXXXXXXXLREAFMLYDRE 204
+REAF ++D++
Sbjct: 70 --MARKMKDTDSEEEIREAFRVFDKD 93
>pdb|4DJC|A Chain A, 1.35 A Crystal Structure Of The Nav1.5 Diii-Iv-CaCAM
COMPLEX
Length = 152
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 65/112 (58%), Gaps = 5/112 (4%)
Query: 2 VGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTLXXXXXXXXXXXXXXXXXXLR 61
+GT+M LG ++ L ++I EVD DG+G ++F EF T+ +R
Sbjct: 36 LGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEE-----IR 90
Query: 62 EAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDF 113
EAF ++D++GNGYI+ LR +++ L L EE++EMI E D DG G +++
Sbjct: 91 EAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNY 142
Score = 77.0 bits (188), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 71/133 (53%), Gaps = 17/133 (12%)
Query: 60 LREAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDF------ 113
+EAF L+D++G+G ITT L ++ L N EL +MI E+D+DG+GTIDF
Sbjct: 16 FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM 75
Query: 114 -----------DVLTRAFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDED 162
+ + AF FD++ G I + +M LG + E ++E+I+E D D
Sbjct: 76 MARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADID 135
Query: 163 GSGELEFNEFCTL 175
G G++ + EF +
Sbjct: 136 GDGQVNYEEFVQM 148
Score = 54.3 bits (129), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 47/86 (54%), Gaps = 5/86 (5%)
Query: 119 AFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTLXXX 178
AF FD++ G+I T +GT+M LG ++ L ++I EVD DG+G ++F EF T+
Sbjct: 19 AFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM--- 75
Query: 179 XXXXXXXXXXXXXXXLREAFMLYDRE 204
+REAF ++D++
Sbjct: 76 --MARKMKDTDSEEEIREAFRVFDKD 99
>pdb|1IQ5|A Chain A, CalmodulinNEMATODE CA2+CALMODULIN DEPENDENT KINASE KINASE
Fragment
pdb|1LVC|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|2BKI|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|2BKI|D Chain D, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|1WRZ|A Chain A, Calmodulin Complexed With A Peptide From A Human
Death-Associated Protein Kinase
pdb|2V01|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Pb
pdb|2V02|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Ba
pdb|2R28|A Chain A, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2R28|B Chain B, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2W73|A Chain A, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|B Chain B, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|E Chain E, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|F Chain F, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|3HR4|B Chain B, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|D Chain D, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|F Chain F, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|H Chain H, Human Inos Reductase And Calmodulin Complex
pdb|3OXQ|A Chain A, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|B Chain B, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|C Chain C, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|D Chain D, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|2Y4V|A Chain A, Crystal Structure Of Human Calmodulin In Complex With A
Dap Kinase-1 Mutant (W305y) Peptide
pdb|3SJQ|A Chain A, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|3SJQ|B Chain B, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|4DCK|B Chain B, Crystal Structure Of The C-Terminus Of Voltage-Gated
Sodium Channel In Complex With Fgf13 And Cam
pdb|3SUI|A Chain A, Crystal Structure Of Ca2+-Calmodulin In Complex With A
Trpv1 C- Terminal Peptide
pdb|4G27|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Phenylurea
pdb|4G28|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Ebio-1
Length = 149
Score = 78.6 bits (192), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 65/112 (58%), Gaps = 5/112 (4%)
Query: 2 VGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTLXXXXXXXXXXXXXXXXXXLR 61
+GT+M LG ++ L ++I EVD DG+G ++F EF T+ +R
Sbjct: 33 LGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEE-----IR 87
Query: 62 EAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDF 113
EAF ++D++GNGYI+ LR +++ L L EE++EMI E D DG G +++
Sbjct: 88 EAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNY 139
Score = 77.4 bits (189), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 71/133 (53%), Gaps = 17/133 (12%)
Query: 60 LREAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDF------ 113
+EAF L+D++G+G ITT L ++ L N EL +MI E+D+DG+GTIDF
Sbjct: 13 FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM 72
Query: 114 -----------DVLTRAFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDED 162
+ + AF FD++ G I + +M LG + E ++E+I+E D D
Sbjct: 73 MARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADID 132
Query: 163 GSGELEFNEFCTL 175
G G++ + EF +
Sbjct: 133 GDGQVNYEEFVQM 145
Score = 54.3 bits (129), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 47/86 (54%), Gaps = 5/86 (5%)
Query: 119 AFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTLXXX 178
AF FD++ G+I T +GT+M LG ++ L ++I EVD DG+G ++F EF T+
Sbjct: 16 AFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM--- 72
Query: 179 XXXXXXXXXXXXXXXLREAFMLYDRE 204
+REAF ++D++
Sbjct: 73 --MARKMKDTDSEEEIREAFRVFDKD 96
>pdb|2BE6|A Chain A, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|B Chain B, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|C Chain C, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|1ZUZ|A Chain A, Calmodulin In Complex With A Mutant Peptide From Human
Drp-1 Kinase
Length = 150
Score = 78.6 bits (192), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 65/112 (58%), Gaps = 5/112 (4%)
Query: 2 VGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTLXXXXXXXXXXXXXXXXXXLR 61
+GT+M LG ++ L ++I EVD DG+G ++F EF T+ +R
Sbjct: 33 LGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEE-----IR 87
Query: 62 EAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDF 113
EAF ++D++GNGYI+ LR +++ L L EE++EMI E D DG G +++
Sbjct: 88 EAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNY 139
Score = 77.4 bits (189), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 71/133 (53%), Gaps = 17/133 (12%)
Query: 60 LREAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDF------ 113
+EAF L+D++G+G ITT L ++ L N EL +MI E+D+DG+GTIDF
Sbjct: 13 FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM 72
Query: 114 -----------DVLTRAFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDED 162
+ + AF FD++ G I + +M LG + E ++E+I+E D D
Sbjct: 73 MARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADID 132
Query: 163 GSGELEFNEFCTL 175
G G++ + EF +
Sbjct: 133 GDGQVNYEEFVQM 145
Score = 54.3 bits (129), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 47/86 (54%), Gaps = 5/86 (5%)
Query: 119 AFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTLXXX 178
AF FD++ G+I T +GT+M LG ++ L ++I EVD DG+G ++F EF T+
Sbjct: 16 AFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM--- 72
Query: 179 XXXXXXXXXXXXXXXLREAFMLYDRE 204
+REAF ++D++
Sbjct: 73 --MARKMKDTDSEEEIREAFRVFDKD 96
>pdb|3EWT|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
pdb|3EWV|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
Length = 154
Score = 78.6 bits (192), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 65/112 (58%), Gaps = 5/112 (4%)
Query: 2 VGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTLXXXXXXXXXXXXXXXXXXLR 61
+GT+M LG ++ L ++I EVD DG+G ++F EF T+ +R
Sbjct: 38 LGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEE-----IR 92
Query: 62 EAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDF 113
EAF ++D++GNGYI+ LR +++ L L EE++EMI E D DG G +++
Sbjct: 93 EAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNY 144
Score = 77.0 bits (188), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 71/133 (53%), Gaps = 17/133 (12%)
Query: 60 LREAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDF------ 113
+EAF L+D++G+G ITT L ++ L N EL +MI E+D+DG+GTIDF
Sbjct: 18 FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM 77
Query: 114 -----------DVLTRAFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDED 162
+ + AF FD++ G I + +M LG + E ++E+I+E D D
Sbjct: 78 MARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADID 137
Query: 163 GSGELEFNEFCTL 175
G G++ + EF +
Sbjct: 138 GDGQVNYEEFVQM 150
Score = 54.3 bits (129), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 47/86 (54%), Gaps = 5/86 (5%)
Query: 119 AFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTLXXX 178
AF FD++ G+I T +GT+M LG ++ L ++I EVD DG+G ++F EF T+
Sbjct: 21 AFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM--- 77
Query: 179 XXXXXXXXXXXXXXXLREAFMLYDRE 204
+REAF ++D++
Sbjct: 78 --MARKMKDTDSEEEIREAFRVFDKD 101
>pdb|1CM1|A Chain A, Motions Of Calmodulin-Single-Conformer Refinement
pdb|1CM4|A Chain A, Motions Of Calmodulin-four-conformer Refinement
pdb|1CKK|A Chain A, CalmodulinRAT CA2+CALMODULIN DEPENDENT PROTEIN KINASE
Fragment
pdb|1CFF|A Chain A, Nmr Solution Structure Of A Complex Of Calmodulin With A
Binding Peptide Of The Ca2+-Pump
pdb|1QIV|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd), 1:2
Complex
pdb|1QIW|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1QIW|B Chain B, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1G4Y|R Chain R, 1.60 A Crystal Structure Of The Gating Domain From Small
Conductance Potassium Channel Complexed With
Calcium-Calmodulin
pdb|1K90|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1IWQ|A Chain A, Crystal Structure Of Marcks Calmodulin Binding Domain
Peptide Complexed With Ca2+CALMODULIN
pdb|1NWD|A Chain A, Solution Structure Of Ca2+CALMODULIN BOUND TO THE C-
Terminal Domain Of Petunia Glutamate Decarboxylase
pdb|1L7Z|A Chain A, Crystal Structure Of Ca2+/calmodulin Complexed With
Myristoylated Cap-23/nap-22 Peptide
pdb|1S26|D Chain D, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|E Chain E, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|F Chain F, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1SK6|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1QX5|D Chain D, Crystal Structure Of Apocalmodulin
pdb|1QX5|I Chain I, Crystal Structure Of Apocalmodulin
pdb|1QX5|B Chain B, Crystal Structure Of Apocalmodulin
pdb|1QX5|J Chain J, Crystal Structure Of Apocalmodulin
pdb|1QX5|K Chain K, Crystal Structure Of Apocalmodulin
pdb|1QX5|T Chain T, Crystal Structure Of Apocalmodulin
pdb|1QX5|R Chain R, Crystal Structure Of Apocalmodulin
pdb|1QX5|Y Chain Y, Crystal Structure Of Apocalmodulin
pdb|1XA5|A Chain A, Structure Of Calmodulin In Complex With Kar-2, A Bis-Indol
Alkaloid
pdb|1SY9|A Chain A, Structure Of Calmodulin Complexed With A Fragment Of The
Olfactory Cng Channel
pdb|2F3Y|A Chain A, CalmodulinIQ DOMAIN COMPLEX
pdb|2F3Z|A Chain A, CalmodulinIQ-Aa Domain Complex
pdb|1X02|A Chain A, Solution Structure Of Stereo Array Isotope Labeled (Sail)
Calmodulin
pdb|2DFS|B Chain B, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|C Chain C, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|D Chain D, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|E Chain E, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|F Chain F, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|G Chain G, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|N Chain N, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|O Chain O, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|P Chain P, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|Q Chain Q, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|R Chain R, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|S Chain S, 3-D Structure Of Myosin-V Inhibited State
pdb|1YR5|A Chain A, 1.7-A Structure Of Calmodulin Bound To A Peptide From Dap
Kinase
pdb|2FOT|A Chain A, Crystal Structure Of The Complex Between Calmodulin And
Alphaii-Spectrin
pdb|2BCX|A Chain A, Crystal Structure Of Calmodulin In Complex With A
Ryanodine Receptor Peptide
pdb|1A29|A Chain A, Calmodulin Complexed With Trifluoperazine (1:2 Complex)
pdb|1CFC|A Chain A, Calcium-Free Calmodulin
pdb|1CFD|A Chain A, Calcium-Free Calmodulin
pdb|1CLL|A Chain A, Calmodulin Structure Refined At 1.7 Angstroms Resolution
pdb|1CTR|A Chain A, Drug Binding By Calmodulin: Crystal Structure Of A
Calmodulin-Trifluoperazine Complex
pdb|1LIN|A Chain A, Calmodulin Complexed With Trifluoperazine (1:4 Complex)
pdb|1MUX|A Chain A, Solution Nmr Structure Of CalmodulinW-7 Complex: The Basis
Of Diversity In Molecular Recognition, 30 Structures
pdb|2HQW|A Chain A, Crystal Structure Of Ca2+CALMODULIN BOUND TO NMDA RECEPTOR
NR1C1 Peptide
pdb|2O5G|A Chain A, Calmodulin-Smooth Muscle Light Chain Kinase Peptide
Complex
pdb|2O60|A Chain A, Calmodulin Bound To Peptide From Neuronal Nitric Oxide
Synthase
pdb|3BXK|A Chain A, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXK|C Chain C, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXL|A Chain A, Crystal Structure Of The R-Type Calcium Channel (Cav2.3)
Iq Domain And Ca2+calmodulin Complex
pdb|2K0E|A Chain A, A Coupled Equilibrium Shift Mechanism In Calmodulin-
Mediated Signal Transduction
pdb|2K0F|A Chain A, Calmodulin Complexed With Calmodulin-Binding Peptide From
Smooth Muscle Myosin Light Chain Kinase
pdb|3DVE|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain Complex
pdb|3DVJ|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain (Without
Cloning Artifact, Hm To Tv) Complex
pdb|3DVK|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.3 Iq Domain Complex
pdb|3DVM|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.1 Iq Domain Complex
pdb|2JZI|A Chain A, Structure Of Calmodulin Complexed With The Calmodulin
Binding Domain Of Calcineurin
pdb|3BYA|A Chain A, Structure Of A Calmodulin Complex
pdb|3G43|A Chain A, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|B Chain B, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|C Chain C, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|D Chain D, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|2KNE|A Chain A, Calmodulin Wraps Around Its Binding Domain In The Plasma
Membrane Ca2+ Pump Anchored By A Novel 18-1 Motif
pdb|2KDU|A Chain A, Structural Basis Of The Munc13-1CA2+-Calmodulin
Interaction: A Novel 1-26 Calmodulin Binding Motif With
A Bipartite Binding Mode
pdb|2X0G|B Chain B, X-ray Structure Of A Dap-kinase Calmodulin Complex
pdb|3GOF|A Chain A, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3GOF|B Chain B, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3IF7|A Chain A, Structure Of Calmodulin Complexed With Its First
Endogenous Inhibitor, Sphingosylphosphorylcholine
pdb|2L53|A Chain A, Solution Nmr Structure Of Apo-Calmodulin In Complex With
The Iq Motif Of Human Cardiac Sodium Channel Nav1.5
pdb|2L7L|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
Calmodulin Kinase I
pdb|2LL6|A Chain A, Solution Nmr Structure Of Cam Bound To Inos Cam Binding
Domain Peptide
pdb|2LL7|A Chain A, Solution Nmr Structure Of Cam Bound To The Enos Cam
Binding Domain Peptide
pdb|4EHQ|A Chain A, Crystal Structure Of Calmodulin Binding Domain Of Orai1 In
Complex With Ca2+CALMODULIN DISPLAYS A UNIQUE BINDING
MODE
Length = 148
Score = 78.6 bits (192), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 65/112 (58%), Gaps = 5/112 (4%)
Query: 2 VGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTLXXXXXXXXXXXXXXXXXXLR 61
+GT+M LG ++ L ++I EVD DG+G ++F EF T+ +R
Sbjct: 32 LGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEE-----IR 86
Query: 62 EAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDF 113
EAF ++D++GNGYI+ LR +++ L L EE++EMI E D DG G +++
Sbjct: 87 EAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNY 138
Score = 77.0 bits (188), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 71/133 (53%), Gaps = 17/133 (12%)
Query: 60 LREAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDF------ 113
+EAF L+D++G+G ITT L ++ L N EL +MI E+D+DG+GTIDF
Sbjct: 12 FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM 71
Query: 114 -----------DVLTRAFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDED 162
+ + AF FD++ G I + +M LG + E ++E+I+E D D
Sbjct: 72 MARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADID 131
Query: 163 GSGELEFNEFCTL 175
G G++ + EF +
Sbjct: 132 GDGQVNYEEFVQM 144
Score = 54.3 bits (129), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 47/86 (54%), Gaps = 5/86 (5%)
Query: 119 AFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTLXXX 178
AF FD++ G+I T +GT+M LG ++ L ++I EVD DG+G ++F EF T+
Sbjct: 15 AFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM--- 71
Query: 179 XXXXXXXXXXXXXXXLREAFMLYDRE 204
+REAF ++D++
Sbjct: 72 --MARKMKDTDSEEEIREAFRVFDKD 95
>pdb|1K93|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
Length = 144
Score = 78.6 bits (192), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 65/112 (58%), Gaps = 5/112 (4%)
Query: 2 VGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTLXXXXXXXXXXXXXXXXXXLR 61
+GT+M LG ++ L ++I EVD DG+G ++F EF T+ +R
Sbjct: 28 LGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEE-----IR 82
Query: 62 EAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDF 113
EAF ++D++GNGYI+ LR +++ L L EE++EMI E D DG G +++
Sbjct: 83 EAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNY 134
Score = 77.4 bits (189), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 71/133 (53%), Gaps = 17/133 (12%)
Query: 60 LREAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDF------ 113
+EAF L+D++G+G ITT L ++ L N EL +MI E+D+DG+GTIDF
Sbjct: 8 FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM 67
Query: 114 -----------DVLTRAFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDED 162
+ + AF FD++ G I + +M LG + E ++E+I+E D D
Sbjct: 68 MARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADID 127
Query: 163 GSGELEFNEFCTL 175
G G++ + EF +
Sbjct: 128 GDGQVNYEEFVQM 140
Score = 54.3 bits (129), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 47/86 (54%), Gaps = 5/86 (5%)
Query: 119 AFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTLXXX 178
AF FD++ G+I T +GT+M LG ++ L ++I EVD DG+G ++F EF T+
Sbjct: 11 AFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM--- 67
Query: 179 XXXXXXXXXXXXXXXLREAFMLYDRE 204
+REAF ++D++
Sbjct: 68 --MARKMKDTDSEEEIREAFRVFDKD 91
>pdb|2VAY|A Chain A, Calmodulin Complexed With Cav1.1 Iq Peptide
pdb|2LGF|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
L-Selectin
Length = 146
Score = 78.6 bits (192), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 65/112 (58%), Gaps = 5/112 (4%)
Query: 2 VGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTLXXXXXXXXXXXXXXXXXXLR 61
+GT+M LG ++ L ++I EVD DG+G ++F EF T+ +R
Sbjct: 30 LGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEE-----IR 84
Query: 62 EAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDF 113
EAF ++D++GNGYI+ LR +++ L L EE++EMI E D DG G +++
Sbjct: 85 EAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNY 136
Score = 77.0 bits (188), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 71/133 (53%), Gaps = 17/133 (12%)
Query: 60 LREAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDF------ 113
+EAF L+D++G+G ITT L ++ L N EL +MI E+D+DG+GTIDF
Sbjct: 10 FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM 69
Query: 114 -----------DVLTRAFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDED 162
+ + AF FD++ G I + +M LG + E ++E+I+E D D
Sbjct: 70 MARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADID 129
Query: 163 GSGELEFNEFCTL 175
G G++ + EF +
Sbjct: 130 GDGQVNYEEFVQM 142
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 47/86 (54%), Gaps = 5/86 (5%)
Query: 119 AFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTLXXX 178
AF FD++ G+I T +GT+M LG ++ L ++I EVD DG+G ++F EF T+
Sbjct: 13 AFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM--- 69
Query: 179 XXXXXXXXXXXXXXXLREAFMLYDRE 204
+REAF ++D++
Sbjct: 70 --MARKMKDTDSEEEIREAFRVFDKD 93
>pdb|1CDL|A Chain A, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|B Chain B, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|C Chain C, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|D Chain D, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1PK0|D Chain D, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|E Chain E, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|F Chain F, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|3GP2|A Chain A, Calmodulin Bound To Peptide From Calmodulin Kinase Ii
(Camkii)
Length = 147
Score = 78.6 bits (192), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 65/112 (58%), Gaps = 5/112 (4%)
Query: 2 VGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTLXXXXXXXXXXXXXXXXXXLR 61
+GT+M LG ++ L ++I EVD DG+G ++F EF T+ +R
Sbjct: 32 LGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEE-----IR 86
Query: 62 EAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDF 113
EAF ++D++GNGYI+ LR +++ L L EE++EMI E D DG G +++
Sbjct: 87 EAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNY 138
Score = 77.4 bits (189), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 71/133 (53%), Gaps = 17/133 (12%)
Query: 60 LREAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDF------ 113
+EAF L+D++G+G ITT L ++ L N EL +MI E+D+DG+GTIDF
Sbjct: 12 FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM 71
Query: 114 -----------DVLTRAFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDED 162
+ + AF FD++ G I + +M LG + E ++E+I+E D D
Sbjct: 72 MARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADID 131
Query: 163 GSGELEFNEFCTL 175
G G++ + EF +
Sbjct: 132 GDGQVNYEEFVQM 144
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 47/86 (54%), Gaps = 5/86 (5%)
Query: 119 AFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTLXXX 178
AF FD++ G+I T +GT+M LG ++ L ++I EVD DG+G ++F EF T+
Sbjct: 15 AFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM--- 71
Query: 179 XXXXXXXXXXXXXXXLREAFMLYDRE 204
+REAF ++D++
Sbjct: 72 --MARKMKDTDSEEEIREAFRVFDKD 95
>pdb|1CDM|A Chain A, Modulation Of Calmodulin Plasticity In Molecular
Recognition On The Basis Of X-Ray Structures
Length = 144
Score = 78.6 bits (192), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 65/112 (58%), Gaps = 5/112 (4%)
Query: 2 VGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTLXXXXXXXXXXXXXXXXXXLR 61
+GT+M LG ++ L ++I EVD DG+G ++F EF T+ +R
Sbjct: 29 LGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEE-----IR 83
Query: 62 EAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDF 113
EAF ++D++GNGYI+ LR +++ L L EE++EMI E D DG G +++
Sbjct: 84 EAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNY 135
Score = 77.4 bits (189), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 71/133 (53%), Gaps = 17/133 (12%)
Query: 60 LREAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDF------ 113
+EAF L+D++G+G ITT L ++ L N EL +MI E+D+DG+GTIDF
Sbjct: 9 FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM 68
Query: 114 -----------DVLTRAFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDED 162
+ + AF FD++ G I + +M LG + E ++E+I+E D D
Sbjct: 69 MARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADID 128
Query: 163 GSGELEFNEFCTL 175
G G++ + EF +
Sbjct: 129 GDGQVNYEEFVQM 141
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 47/86 (54%), Gaps = 5/86 (5%)
Query: 119 AFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTLXXX 178
AF FD++ G+I T +GT+M LG ++ L ++I EVD DG+G ++F EF T+
Sbjct: 12 AFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM--- 68
Query: 179 XXXXXXXXXXXXXXXLREAFMLYDRE 204
+REAF ++D++
Sbjct: 69 --MARKMKDTDSEEEIREAFRVFDKD 92
>pdb|4GOW|D Chain D, Crystal Structure Of Ca2+CAM:KV7.4 (KCNQ4) B HELIX COMPLEX
Length = 144
Score = 78.6 bits (192), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 65/112 (58%), Gaps = 5/112 (4%)
Query: 2 VGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTLXXXXXXXXXXXXXXXXXXLR 61
+GT+M LG ++ L ++I EVD DG+G ++F EF T+ +R
Sbjct: 30 LGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEE-----IR 84
Query: 62 EAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDF 113
EAF ++D++GNGYI+ LR +++ L L EE++EMI E D DG G +++
Sbjct: 85 EAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNY 136
Score = 77.0 bits (188), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 71/133 (53%), Gaps = 17/133 (12%)
Query: 60 LREAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDF------ 113
+EAF L+D++G+G ITT L ++ L N EL +MI E+D+DG+GTIDF
Sbjct: 10 FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM 69
Query: 114 -----------DVLTRAFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDED 162
+ + AF FD++ G I + +M LG + E ++E+I+E D D
Sbjct: 70 MARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADID 129
Query: 163 GSGELEFNEFCTL 175
G G++ + EF +
Sbjct: 130 GDGQVNYEEFVQM 142
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 47/86 (54%), Gaps = 5/86 (5%)
Query: 119 AFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTLXXX 178
AF FD++ G+I T +GT+M LG ++ L ++I EVD DG+G ++F EF T+
Sbjct: 13 AFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM--- 69
Query: 179 XXXXXXXXXXXXXXXLREAFMLYDRE 204
+REAF ++D++
Sbjct: 70 --MARKMKDTDSEEEIREAFRVFDKD 93
Score = 30.4 bits (67), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 23/37 (62%)
Query: 5 IMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTL 41
+M LG + E ++E+I+E D DG G++ + EF +
Sbjct: 106 VMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 142
>pdb|3SG2|A Chain A, Crystal Structure Of Gcamp2-T116v,D381y
Length = 449
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 66/113 (58%), Gaps = 5/113 (4%)
Query: 2 VGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTLXXXXXXXXXXXXXXXXXXLR 61
+GT+M LG ++ L ++I EVD DG+G ++F EF T+ +R
Sbjct: 333 LGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKYTDSEEE-----IR 387
Query: 62 EAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDFD 114
EAF ++D++GNGYI+ LR +++ L L EE++EMI E D DG G ++++
Sbjct: 388 EAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 440
Score = 77.0 bits (188), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 72/133 (54%), Gaps = 17/133 (12%)
Query: 60 LREAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDF----DV 115
+EAF L+D++G+G ITT L ++ L N EL +MI E+D+DG+GTIDF +
Sbjct: 313 FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM 372
Query: 116 LTR-------------AFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDED 162
+ R AF FD++ G I + +M LG + E ++E+I+E D D
Sbjct: 373 MARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADID 432
Query: 163 GSGELEFNEFCTL 175
G G++ + EF +
Sbjct: 433 GDGQVNYEEFVQM 445
Score = 53.9 bits (128), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 47/86 (54%), Gaps = 5/86 (5%)
Query: 119 AFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTLXXX 178
AF FD++ G+I T +GT+M LG ++ L ++I EVD DG+G ++F EF T+
Sbjct: 316 AFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM--- 372
Query: 179 XXXXXXXXXXXXXXXLREAFMLYDRE 204
+REAF ++D++
Sbjct: 373 --MARKMKYTDSEEEIREAFRVFDKD 396
>pdb|2IX7|A Chain A, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
pdb|2IX7|B Chain B, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
Length = 145
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 65/112 (58%), Gaps = 5/112 (4%)
Query: 2 VGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTLXXXXXXXXXXXXXXXXXXLR 61
+GT+M LG ++ L ++I EVD DG+G ++F EF T+ +R
Sbjct: 31 LGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEE-----IR 85
Query: 62 EAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDF 113
EAF ++D++GNGYI+ LR +++ L L EE++EMI E D DG G +++
Sbjct: 86 EAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNY 137
Score = 77.0 bits (188), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 71/133 (53%), Gaps = 17/133 (12%)
Query: 60 LREAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDF------ 113
+EAF L+D++G+G ITT L ++ L N EL +MI E+D+DG+GTIDF
Sbjct: 11 FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM 70
Query: 114 -----------DVLTRAFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDED 162
+ + AF FD++ G I + +M LG + E ++E+I+E D D
Sbjct: 71 MARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADID 130
Query: 163 GSGELEFNEFCTL 175
G G++ + EF +
Sbjct: 131 GDGQVNYEEFVQM 143
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 47/86 (54%), Gaps = 5/86 (5%)
Query: 119 AFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTLXXX 178
AF FD++ G+I T +GT+M LG ++ L ++I EVD DG+G ++F EF T+
Sbjct: 14 AFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM--- 70
Query: 179 XXXXXXXXXXXXXXXLREAFMLYDRE 204
+REAF ++D++
Sbjct: 71 --MARKMKDTDSEEEIREAFRVFDKD 94
Score = 30.4 bits (67), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 23/37 (62%)
Query: 5 IMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTL 41
+M LG + E ++E+I+E D DG G++ + EF +
Sbjct: 107 VMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 143
>pdb|3EK8|A Chain A, Calcium-Saturated Gcamp2 T116vG87R MUTANT MONOMER
Length = 449
Score = 78.2 bits (191), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 66/113 (58%), Gaps = 5/113 (4%)
Query: 2 VGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTLXXXXXXXXXXXXXXXXXXLR 61
+GT+M LG ++ L ++I EVD DG+G ++F EF T+ +R
Sbjct: 333 LGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEE-----IR 387
Query: 62 EAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDFD 114
EAF ++D++GNGYI+ LR +++ L L EE++EMI E D DG G ++++
Sbjct: 388 EAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 440
Score = 77.0 bits (188), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 72/133 (54%), Gaps = 17/133 (12%)
Query: 60 LREAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDFD----V 115
+EAF L+D++G+G ITT L ++ L N EL +MI E+D+DG+GTIDF +
Sbjct: 313 FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM 372
Query: 116 LTR-------------AFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDED 162
+ R AF FD++ G I + +M LG + E ++E+I+E D D
Sbjct: 373 MARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADID 432
Query: 163 GSGELEFNEFCTL 175
G G++ + EF +
Sbjct: 433 GDGQVNYEEFVQM 445
Score = 53.9 bits (128), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 47/86 (54%), Gaps = 5/86 (5%)
Query: 119 AFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTLXXX 178
AF FD++ G+I T +GT+M LG ++ L ++I EVD DG+G ++F EF T+
Sbjct: 316 AFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM--- 372
Query: 179 XXXXXXXXXXXXXXXLREAFMLYDRE 204
+REAF ++D++
Sbjct: 373 --MARKMKDTDSEEEIREAFRVFDKD 396
>pdb|1QS7|A Chain A, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
pdb|1QS7|C Chain C, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 145
Score = 78.2 bits (191), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 71/133 (53%), Gaps = 17/133 (12%)
Query: 60 LREAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDF------ 113
+EAF L+D++G+G ITT L ++ L N EL +MI E+D+DG+GTIDF
Sbjct: 9 FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNL 68
Query: 114 -----------DVLTRAFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDED 162
+ L AF FD++ G I + +M LG + E ++E+I+E D D
Sbjct: 69 MARKMKDTDSEEELKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVD 128
Query: 163 GSGELEFNEFCTL 175
G G++ + EF +
Sbjct: 129 GDGQVNYEEFVQV 141
Score = 75.9 bits (185), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 64/112 (57%), Gaps = 5/112 (4%)
Query: 2 VGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTLXXXXXXXXXXXXXXXXXXLR 61
+GT+M LG ++ L ++I EVD DG+G ++F EF L L+
Sbjct: 29 LGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEE-----LK 83
Query: 62 EAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDF 113
EAF ++D++GNG+I+ LR +++ L L EE++EMI E D DG G +++
Sbjct: 84 EAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQVNY 135
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 5/86 (5%)
Query: 119 AFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTLXXX 178
AF FD++ G+I T +GT+M LG ++ L ++I EVD DG+G ++F EF L
Sbjct: 12 AFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNL--- 68
Query: 179 XXXXXXXXXXXXXXXLREAFMLYDRE 204
L+EAF ++D++
Sbjct: 69 --MARKMKDTDSEEELKEAFRVFDKD 92
>pdb|3SG6|A Chain A, Crystal Structure Of Dimeric Gcamp2-Lia(Linker 1)
Length = 450
Score = 78.2 bits (191), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 66/113 (58%), Gaps = 5/113 (4%)
Query: 2 VGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTLXXXXXXXXXXXXXXXXXXLR 61
+GT+M LG ++ L ++I EVD DG+G ++F EF T+ +R
Sbjct: 334 LGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEE-----IR 388
Query: 62 EAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDFD 114
EAF ++D++GNGYI+ LR +++ L L EE++EMI E D DG G ++++
Sbjct: 389 EAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 441
Score = 77.0 bits (188), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 72/133 (54%), Gaps = 17/133 (12%)
Query: 60 LREAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDF----DV 115
+EAF L+D++G+G ITT L ++ L N EL +MI E+D+DG+GTIDF +
Sbjct: 314 FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM 373
Query: 116 LTR-------------AFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDED 162
+ R AF FD++ G I + +M LG + E ++E+I+E D D
Sbjct: 374 MARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADID 433
Query: 163 GSGELEFNEFCTL 175
G G++ + EF +
Sbjct: 434 GDGQVNYEEFVQM 446
Score = 53.9 bits (128), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 47/86 (54%), Gaps = 5/86 (5%)
Query: 119 AFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTLXXX 178
AF FD++ G+I T +GT+M LG ++ L ++I EVD DG+G ++F EF T+
Sbjct: 317 AFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM--- 373
Query: 179 XXXXXXXXXXXXXXXLREAFMLYDRE 204
+REAF ++D++
Sbjct: 374 --MARKMKDTDSEEEIREAFRVFDKD 397
>pdb|1PRW|A Chain A, Crystal Structure Of Bovine Brain Ca++ Calmodulin In A
Compact Form
Length = 149
Score = 78.2 bits (191), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 65/112 (58%), Gaps = 5/112 (4%)
Query: 2 VGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTLXXXXXXXXXXXXXXXXXXLR 61
+GT+M LG ++ L ++I EVD DG+G ++F EF T+ +R
Sbjct: 33 LGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEE-----IR 87
Query: 62 EAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDF 113
EAF ++D++GNGYI+ LR +++ L L EE++EMI E D DG G +++
Sbjct: 88 EAFRVFDKDGNGYISAAELRHVMTNLGEXLTDEEVDEMIREADIDGDGQVNY 139
Score = 76.6 bits (187), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 71/133 (53%), Gaps = 17/133 (12%)
Query: 60 LREAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDF------ 113
+EAF L+D++G+G ITT L ++ L N EL +MI E+D+DG+GTIDF
Sbjct: 13 FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM 72
Query: 114 -----------DVLTRAFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDED 162
+ + AF FD++ G I + +M LG + E ++E+I+E D D
Sbjct: 73 MARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEXLTDEEVDEMIREADID 132
Query: 163 GSGELEFNEFCTL 175
G G++ + EF +
Sbjct: 133 GDGQVNYEEFVQM 145
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 47/86 (54%), Gaps = 5/86 (5%)
Query: 119 AFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTLXXX 178
AF FD++ G+I T +GT+M LG ++ L ++I EVD DG+G ++F EF T+
Sbjct: 16 AFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM--- 72
Query: 179 XXXXXXXXXXXXXXXLREAFMLYDRE 204
+REAF ++D++
Sbjct: 73 --MARKMKDTDSEEEIREAFRVFDKD 96
>pdb|1UP5|A Chain A, Chicken Calmodulin
pdb|1UP5|B Chain B, Chicken Calmodulin
Length = 148
Score = 78.2 bits (191), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 65/112 (58%), Gaps = 5/112 (4%)
Query: 2 VGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTLXXXXXXXXXXXXXXXXXXLR 61
+GT+M LG ++ L ++I EVD DG+G ++F EF T+ +R
Sbjct: 32 LGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEE-----IR 86
Query: 62 EAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDF 113
EAF ++D++GNGYI+ LR +++ L L EE++EMI E D DG G +++
Sbjct: 87 EAFRVFDKDGNGYISAAELRHVMTNLGEXLTDEEVDEMIREADIDGDGQVNY 138
Score = 76.6 bits (187), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 71/133 (53%), Gaps = 17/133 (12%)
Query: 60 LREAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDF------ 113
+EAF L+D++G+G ITT L ++ L N EL +MI E+D+DG+GTIDF
Sbjct: 12 FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM 71
Query: 114 -----------DVLTRAFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDED 162
+ + AF FD++ G I + +M LG + E ++E+I+E D D
Sbjct: 72 MARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEXLTDEEVDEMIREADID 131
Query: 163 GSGELEFNEFCTL 175
G G++ + EF +
Sbjct: 132 GDGQVNYEEFVQM 144
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 47/86 (54%), Gaps = 5/86 (5%)
Query: 119 AFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTLXXX 178
AF FD++ G+I T +GT+M LG ++ L ++I EVD DG+G ++F EF T+
Sbjct: 15 AFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM--- 71
Query: 179 XXXXXXXXXXXXXXXLREAFMLYDRE 204
+REAF ++D++
Sbjct: 72 --MARKMKDTDSEEEIREAFRVFDKD 95
>pdb|2K0J|A Chain A, Solution Structure Of Cam Complexed To Drp1p
pdb|2K61|A Chain A, Solution Structure Of Cam Complexed To Dapk Peptide
Length = 148
Score = 78.2 bits (191), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 64/112 (57%), Gaps = 5/112 (4%)
Query: 2 VGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTLXXXXXXXXXXXXXXXXXXLR 61
+GT+M LG ++ L ++I EVD DG G ++F EF T+ +R
Sbjct: 32 LGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMMARKMKDTDSEEE-----IR 86
Query: 62 EAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDF 113
EAF ++D++GNGYI+ LR +++ L L EE++EMI E D DG G +++
Sbjct: 87 EAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNY 138
Score = 76.6 bits (187), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 70/133 (52%), Gaps = 17/133 (12%)
Query: 60 LREAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDF------ 113
+EAF L+D++G+G ITT L ++ L N EL +MI E+D+DG GTIDF
Sbjct: 12 FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTM 71
Query: 114 -----------DVLTRAFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDED 162
+ + AF FD++ G I + +M LG + E ++E+I+E D D
Sbjct: 72 MARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADID 131
Query: 163 GSGELEFNEFCTL 175
G G++ + EF +
Sbjct: 132 GDGQVNYEEFVQM 144
Score = 53.9 bits (128), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 5/86 (5%)
Query: 119 AFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTLXXX 178
AF FD++ G+I T +GT+M LG ++ L ++I EVD DG G ++F EF T+
Sbjct: 15 AFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTM--- 71
Query: 179 XXXXXXXXXXXXXXXLREAFMLYDRE 204
+REAF ++D++
Sbjct: 72 --MARKMKDTDSEEEIREAFRVFDKD 95
>pdb|2VB6|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigor State
( Crystal Form 2)
Length = 149
Score = 78.2 bits (191), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 72/133 (54%), Gaps = 17/133 (12%)
Query: 60 LREAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDF------ 113
+EAF L+D++G+G ITT L ++ L N EL +MI E+D+DG+GTIDF
Sbjct: 13 FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM 72
Query: 114 -----------DVLTRAFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDED 162
+ + AF FD++ G I + +M LG + E ++E+I+E D D
Sbjct: 73 MARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIRESDID 132
Query: 163 GSGELEFNEFCTL 175
G G++ + EF T+
Sbjct: 133 GDGQVNYEEFVTM 145
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 65/112 (58%), Gaps = 5/112 (4%)
Query: 2 VGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTLXXXXXXXXXXXXXXXXXXLR 61
+GT+M LG ++ L ++I EVD DG+G ++F EF T+ +R
Sbjct: 33 LGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEE-----IR 87
Query: 62 EAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDF 113
EAF ++D++GNG+I+ LR +++ L L EE++EMI E D DG G +++
Sbjct: 88 EAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIRESDIDGDGQVNY 139
Score = 43.5 bits (101), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 46/110 (41%), Gaps = 25/110 (22%)
Query: 95 ELNEMIEEIDSDGSGTIDFDVLTRAFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNE 154
E E D DG GT I T +GT+M LG ++ L +
Sbjct: 12 EFKEAFSLFDKDGDGT--------------------ITTKELGTVMRSLGQNPTEAELQD 51
Query: 155 IIKEVDEDGSGELEFNEFCTLXXXXXXXXXXXXXXXXXXLREAFMLYDRE 204
+I EVD DG+G ++F EF T+ +REAF ++D++
Sbjct: 52 MINEVDADGNGTIDFPEFLTM-----MARKMKDTDSEEEIREAFRVFDKD 96
Score = 32.0 bits (71), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 24/37 (64%)
Query: 5 IMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTL 41
+M LG + E ++E+I+E D DG G++ + EF T+
Sbjct: 109 VMTNLGEKLTDEEVDEMIRESDIDGDGQVNYEEFVTM 145
>pdb|3EVU|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2, (#1)
pdb|3EVV|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2 (#2)
pdb|3EK4|A Chain A, Calcium-Saturated Gcamp2 Monomer
pdb|3EK7|A Chain A, Calcium-Saturated Gcamp2 Dimer
Length = 449
Score = 78.2 bits (191), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 66/113 (58%), Gaps = 5/113 (4%)
Query: 2 VGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTLXXXXXXXXXXXXXXXXXXLR 61
+GT+M LG ++ L ++I EVD DG+G ++F EF T+ +R
Sbjct: 333 LGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEE-----IR 387
Query: 62 EAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDFD 114
EAF ++D++GNGYI+ LR +++ L L EE++EMI E D DG G ++++
Sbjct: 388 EAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 440
Score = 76.6 bits (187), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 72/133 (54%), Gaps = 17/133 (12%)
Query: 60 LREAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDFD----V 115
+EAF L+D++G+G ITT L ++ L N EL +MI E+D+DG+GTIDF +
Sbjct: 313 FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM 372
Query: 116 LTR-------------AFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDED 162
+ R AF FD++ G I + +M LG + E ++E+I+E D D
Sbjct: 373 MARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADID 432
Query: 163 GSGELEFNEFCTL 175
G G++ + EF +
Sbjct: 433 GDGQVNYEEFVQM 445
Score = 53.9 bits (128), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 47/86 (54%), Gaps = 5/86 (5%)
Query: 119 AFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTLXXX 178
AF FD++ G+I T +GT+M LG ++ L ++I EVD DG+G ++F EF T+
Sbjct: 316 AFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM--- 372
Query: 179 XXXXXXXXXXXXXXXLREAFMLYDRE 204
+REAF ++D++
Sbjct: 373 --MARKMKDTDSEEEIREAFRVFDKD 396
>pdb|3EKH|A Chain A, Calcium-Saturated Gcamp2 T116vK378W MUTANT MONOMER
Length = 449
Score = 78.2 bits (191), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 66/113 (58%), Gaps = 5/113 (4%)
Query: 2 VGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTLXXXXXXXXXXXXXXXXXXLR 61
+GT+M LG ++ L ++I EVD DG+G ++F EF T+ +R
Sbjct: 333 LGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARWMKDTDSEEE-----IR 387
Query: 62 EAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDFD 114
EAF ++D++GNGYI+ LR +++ L L EE++EMI E D DG G ++++
Sbjct: 388 EAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 440
Score = 77.0 bits (188), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 72/133 (54%), Gaps = 17/133 (12%)
Query: 60 LREAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDFD----V 115
+EAF L+D++G+G ITT L ++ L N EL +MI E+D+DG+GTIDF +
Sbjct: 313 FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM 372
Query: 116 LTR-------------AFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDED 162
+ R AF FD++ G I + +M LG + E ++E+I+E D D
Sbjct: 373 MARWMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADID 432
Query: 163 GSGELEFNEFCTL 175
G G++ + EF +
Sbjct: 433 GDGQVNYEEFVQM 445
Score = 53.9 bits (128), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 47/86 (54%), Gaps = 5/86 (5%)
Query: 119 AFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTLXXX 178
AF FD++ G+I T +GT+M LG ++ L ++I EVD DG+G ++F EF T+
Sbjct: 316 AFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM--- 372
Query: 179 XXXXXXXXXXXXXXXLREAFMLYDRE 204
+REAF ++D++
Sbjct: 373 --MARWMKDTDSEEEIREAFRVFDKD 396
>pdb|1QTX|A Chain A, The 1.65 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 78.2 bits (191), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 71/133 (53%), Gaps = 17/133 (12%)
Query: 60 LREAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDF------ 113
+EAF L+D++G+G ITT L ++ L N EL +MI E+D+DG+GTIDF
Sbjct: 12 FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNL 71
Query: 114 -----------DVLTRAFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDED 162
+ L AF FD++ G I + +M LG + E ++E+I+E D D
Sbjct: 72 MARKMKDTDSEEELKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVD 131
Query: 163 GSGELEFNEFCTL 175
G G++ + EF +
Sbjct: 132 GDGQVNYEEFVQV 144
Score = 75.9 bits (185), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 64/112 (57%), Gaps = 5/112 (4%)
Query: 2 VGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTLXXXXXXXXXXXXXXXXXXLR 61
+GT+M LG ++ L ++I EVD DG+G ++F EF L L+
Sbjct: 32 LGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEE-----LK 86
Query: 62 EAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDF 113
EAF ++D++GNG+I+ LR +++ L L EE++EMI E D DG G +++
Sbjct: 87 EAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQVNY 138
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 5/86 (5%)
Query: 119 AFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTLXXX 178
AF FD++ G+I T +GT+M LG ++ L ++I EVD DG+G ++F EF L
Sbjct: 15 AFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNL--- 71
Query: 179 XXXXXXXXXXXXXXXLREAFMLYDRE 204
L+EAF ++D++
Sbjct: 72 --MARKMKDTDSEEELKEAFRVFDKD 95
>pdb|3EVR|A Chain A, Crystal Structure Of Calcium Bound Monomeric Gcamp2
Length = 411
Score = 78.2 bits (191), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 66/113 (58%), Gaps = 5/113 (4%)
Query: 2 VGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTLXXXXXXXXXXXXXXXXXXLR 61
+GT+M LG ++ L ++I EVD DG+G ++F EF T+ +R
Sbjct: 296 LGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEE-----IR 350
Query: 62 EAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDFD 114
EAF ++D++GNGYI+ LR +++ L L EE++EMI E D DG G ++++
Sbjct: 351 EAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 403
Score = 76.6 bits (187), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 72/133 (54%), Gaps = 17/133 (12%)
Query: 60 LREAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDFD----V 115
+EAF L+D++G+G ITT L ++ L N EL +MI E+D+DG+GTIDF +
Sbjct: 276 FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM 335
Query: 116 LTR-------------AFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDED 162
+ R AF FD++ G I + +M LG + E ++E+I+E D D
Sbjct: 336 MARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADID 395
Query: 163 GSGELEFNEFCTL 175
G G++ + EF +
Sbjct: 396 GDGQVNYEEFVQM 408
Score = 53.9 bits (128), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 47/86 (54%), Gaps = 5/86 (5%)
Query: 119 AFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTLXXX 178
AF FD++ G+I T +GT+M LG ++ L ++I EVD DG+G ++F EF T+
Sbjct: 279 AFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM--- 335
Query: 179 XXXXXXXXXXXXXXXLREAFMLYDRE 204
+REAF ++D++
Sbjct: 336 --MARKMKDTDSEEEIREAFRVFDKD 359
>pdb|3O78|A Chain A, The Structure Of Ca2+ Sensor (Case-12)
pdb|3O78|B Chain B, The Structure Of Ca2+ Sensor (Case-12)
Length = 415
Score = 78.2 bits (191), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 66/113 (58%), Gaps = 5/113 (4%)
Query: 2 VGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTLXXXXXXXXXXXXXXXXXXLR 61
+GT+M LG ++ L ++I EVD DG+G ++F EF T+ +R
Sbjct: 299 LGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEE-----IR 353
Query: 62 EAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDFD 114
EAF ++D++GNGYI+ LR +++ L L EE++EMI E D DG G ++++
Sbjct: 354 EAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 406
Score = 76.6 bits (187), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 72/133 (54%), Gaps = 17/133 (12%)
Query: 60 LREAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDFD----V 115
+EAF L+D++G+G ITT L ++ L N EL +MI E+D+DG+GTIDF +
Sbjct: 279 FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM 338
Query: 116 LTR-------------AFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDED 162
+ R AF FD++ G I + +M LG + E ++E+I+E D D
Sbjct: 339 MARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADID 398
Query: 163 GSGELEFNEFCTL 175
G G++ + EF +
Sbjct: 399 GDGQVNYEEFVQM 411
Score = 53.9 bits (128), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 47/86 (54%), Gaps = 5/86 (5%)
Query: 119 AFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTLXXX 178
AF FD++ G+I T +GT+M LG ++ L ++I EVD DG+G ++F EF T+
Sbjct: 282 AFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM--- 338
Query: 179 XXXXXXXXXXXXXXXLREAFMLYDRE 204
+REAF ++D++
Sbjct: 339 --MARKMKDTDSEEEIREAFRVFDKD 362
>pdb|3O77|A Chain A, The Structure Of Ca2+ Sensor (Case-16)
Length = 415
Score = 78.2 bits (191), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 66/113 (58%), Gaps = 5/113 (4%)
Query: 2 VGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTLXXXXXXXXXXXXXXXXXXLR 61
+GT+M LG ++ L ++I EVD DG+G ++F EF T+ +R
Sbjct: 299 LGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEE-----IR 353
Query: 62 EAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDFD 114
EAF ++D++GNGYI+ LR +++ L L EE++EMI E D DG G ++++
Sbjct: 354 EAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 406
Score = 76.6 bits (187), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 72/133 (54%), Gaps = 17/133 (12%)
Query: 60 LREAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDFD----V 115
+EAF L+D++G+G ITT L ++ L N EL +MI E+D+DG+GTIDF +
Sbjct: 279 FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM 338
Query: 116 LTR-------------AFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDED 162
+ R AF FD++ G I + +M LG + E ++E+I+E D D
Sbjct: 339 MARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADID 398
Query: 163 GSGELEFNEFCTL 175
G G++ + EF +
Sbjct: 399 GDGQVNYEEFVQM 411
Score = 53.9 bits (128), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 47/86 (54%), Gaps = 5/86 (5%)
Query: 119 AFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTLXXX 178
AF FD++ G+I T +GT+M LG ++ L ++I EVD DG+G ++F EF T+
Sbjct: 282 AFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM--- 338
Query: 179 XXXXXXXXXXXXXXXLREAFMLYDRE 204
+REAF ++D++
Sbjct: 339 --MARKMKDTDSEEEIREAFRVFDKD 362
>pdb|1XFU|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFV|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFW|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFY|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFZ|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 77.8 bits (190), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 65/112 (58%), Gaps = 5/112 (4%)
Query: 2 VGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTLXXXXXXXXXXXXXXXXXXLR 61
+GT+M LG ++ L ++I EVD DG+G ++F EF T+ +R
Sbjct: 33 LGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEE-----IR 87
Query: 62 EAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDF 113
EAF ++D++GNGYI+ LR +++ L L EE+++MI E D DG G +++
Sbjct: 88 EAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDQMIREADIDGDGQVNY 139
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 71/133 (53%), Gaps = 17/133 (12%)
Query: 60 LREAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDF------ 113
+EAF L+D++G+G ITT L ++ L N EL +MI E+D+DG+GTIDF
Sbjct: 13 FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM 72
Query: 114 -----------DVLTRAFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDED 162
+ + AF FD++ G I + +M LG + E ++++I+E D D
Sbjct: 73 MARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDQMIREADID 132
Query: 163 GSGELEFNEFCTL 175
G G++ + EF +
Sbjct: 133 GDGQVNYEEFVQM 145
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 47/86 (54%), Gaps = 5/86 (5%)
Query: 119 AFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTLXXX 178
AF FD++ G+I T +GT+M LG ++ L ++I EVD DG+G ++F EF T+
Sbjct: 16 AFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM--- 72
Query: 179 XXXXXXXXXXXXXXXLREAFMLYDRE 204
+REAF ++D++
Sbjct: 73 --MARKMKDTDSEEEIREAFRVFDKD 96
>pdb|3SG5|A Chain A, Crystal Structure Of Dimeric Gcamp3-D380y, Qp(Linker 1),
Lp(Linker 2)
Length = 448
Score = 77.8 bits (190), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 65/113 (57%), Gaps = 5/113 (4%)
Query: 2 VGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTLXXXXXXXXXXXXXXXXXXLR 61
+GT+M LG ++ L ++I EVD DG G ++F EF T+ +R
Sbjct: 332 LGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMMARKMKYTDSEEE-----IR 386
Query: 62 EAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDFD 114
EAF ++D++GNGYI+ LR +++ L L EE++EMI E D DG G ++++
Sbjct: 387 EAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 439
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 71/133 (53%), Gaps = 17/133 (12%)
Query: 60 LREAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDFD----V 115
+EAF L+D++G+G ITT L ++ L N EL +MI E+D+DG GTIDF +
Sbjct: 312 FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTM 371
Query: 116 LTR-------------AFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDED 162
+ R AF FD++ G I + +M LG + E ++E+I+E D D
Sbjct: 372 MARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADID 431
Query: 163 GSGELEFNEFCTL 175
G G++ + EF +
Sbjct: 432 GDGQVNYEEFVQM 444
Score = 53.5 bits (127), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 5/86 (5%)
Query: 119 AFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTLXXX 178
AF FD++ G+I T +GT+M LG ++ L ++I EVD DG G ++F EF T+
Sbjct: 315 AFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTM--- 371
Query: 179 XXXXXXXXXXXXXXXLREAFMLYDRE 204
+REAF ++D++
Sbjct: 372 --MARKMKYTDSEEEIREAFRVFDKD 395
>pdb|3SG4|A Chain A, Crystal Structure Of Gcamp3-D380y, Lp(Linker 2)
Length = 448
Score = 77.8 bits (190), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 65/113 (57%), Gaps = 5/113 (4%)
Query: 2 VGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTLXXXXXXXXXXXXXXXXXXLR 61
+GT+M LG ++ L ++I EVD DG G ++F EF T+ +R
Sbjct: 332 LGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMMARKMKYTDSEEE-----IR 386
Query: 62 EAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDFD 114
EAF ++D++GNGYI+ LR +++ L L EE++EMI E D DG G ++++
Sbjct: 387 EAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 439
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 71/133 (53%), Gaps = 17/133 (12%)
Query: 60 LREAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDFD----V 115
+EAF L+D++G+G ITT L ++ L N EL +MI E+D+DG GTIDF +
Sbjct: 312 FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTM 371
Query: 116 LTR-------------AFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDED 162
+ R AF FD++ G I + +M LG + E ++E+I+E D D
Sbjct: 372 MARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADID 431
Query: 163 GSGELEFNEFCTL 175
G G++ + EF +
Sbjct: 432 GDGQVNYEEFVQM 444
Score = 53.5 bits (127), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 5/86 (5%)
Query: 119 AFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTLXXX 178
AF FD++ G+I T +GT+M LG ++ L ++I EVD DG G ++F EF T+
Sbjct: 315 AFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTM--- 371
Query: 179 XXXXXXXXXXXXXXXLREAFMLYDRE 204
+REAF ++D++
Sbjct: 372 --MARKMKYTDSEEEIREAFRVFDKD 395
>pdb|3SG3|A Chain A, Crystal Structure Of Gcamp3-D380y
Length = 449
Score = 77.8 bits (190), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 65/113 (57%), Gaps = 5/113 (4%)
Query: 2 VGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTLXXXXXXXXXXXXXXXXXXLR 61
+GT+M LG ++ L ++I EVD DG G ++F EF T+ +R
Sbjct: 333 LGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMMARKMKYTDSEEE-----IR 387
Query: 62 EAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDFD 114
EAF ++D++GNGYI+ LR +++ L L EE++EMI E D DG G ++++
Sbjct: 388 EAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 440
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 71/133 (53%), Gaps = 17/133 (12%)
Query: 60 LREAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDFD----V 115
+EAF L+D++G+G ITT L ++ L N EL +MI E+D+DG GTIDF +
Sbjct: 313 FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTM 372
Query: 116 LTR-------------AFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDED 162
+ R AF FD++ G I + +M LG + E ++E+I+E D D
Sbjct: 373 MARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADID 432
Query: 163 GSGELEFNEFCTL 175
G G++ + EF +
Sbjct: 433 GDGQVNYEEFVQM 445
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 5/86 (5%)
Query: 119 AFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTLXXX 178
AF FD++ G+I T +GT+M LG ++ L ++I EVD DG G ++F EF T+
Sbjct: 316 AFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTM--- 372
Query: 179 XXXXXXXXXXXXXXXLREAFMLYDRE 204
+REAF ++D++
Sbjct: 373 --MARKMKYTDSEEEIREAFRVFDKD 396
>pdb|3SG7|A Chain A, Crystal Structure Of Gcamp3-Kf(Linker 1)
Length = 448
Score = 77.8 bits (190), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 65/113 (57%), Gaps = 5/113 (4%)
Query: 2 VGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTLXXXXXXXXXXXXXXXXXXLR 61
+GT+M LG ++ L ++I EVD DG G ++F EF T+ +R
Sbjct: 332 LGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMMARKMKDTDSEEE-----IR 386
Query: 62 EAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDFD 114
EAF ++D++GNGYI+ LR +++ L L EE++EMI E D DG G ++++
Sbjct: 387 EAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 439
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 71/133 (53%), Gaps = 17/133 (12%)
Query: 60 LREAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDFD----V 115
+EAF L+D++G+G ITT L ++ L N EL +MI E+D+DG GTIDF +
Sbjct: 312 FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTM 371
Query: 116 LTR-------------AFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDED 162
+ R AF FD++ G I + +M LG + E ++E+I+E D D
Sbjct: 372 MARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADID 431
Query: 163 GSGELEFNEFCTL 175
G G++ + EF +
Sbjct: 432 GDGQVNYEEFVQM 444
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 5/86 (5%)
Query: 119 AFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTLXXX 178
AF FD++ G+I T +GT+M LG ++ L ++I EVD DG G ++F EF T+
Sbjct: 315 AFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTM--- 371
Query: 179 XXXXXXXXXXXXXXXLREAFMLYDRE 204
+REAF ++D++
Sbjct: 372 --MARKMKDTDSEEEIREAFRVFDKD 395
>pdb|1DMO|A Chain A, Calmodulin, Nmr, 30 Structures
pdb|3CLN|A Chain A, Structure Of Calmodulin Refined At 2.2 Angstroms
Resolution
Length = 148
Score = 77.0 bits (188), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 65/112 (58%), Gaps = 5/112 (4%)
Query: 2 VGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTLXXXXXXXXXXXXXXXXXXLR 61
+GT+M LG ++ L ++I EVD DG+G ++F EF T+ +R
Sbjct: 32 LGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEE-----IR 86
Query: 62 EAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDF 113
EAF ++D++GNGYI+ LR +++ L L EE++EMI E + DG G +++
Sbjct: 87 EAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREANIDGDGQVNY 138
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 71/133 (53%), Gaps = 17/133 (12%)
Query: 60 LREAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDF------ 113
+EAF L+D++G+G ITT L ++ L N EL +MI E+D+DG+GTIDF
Sbjct: 12 FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM 71
Query: 114 -----------DVLTRAFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDED 162
+ + AF FD++ G I + +M LG + E ++E+I+E + D
Sbjct: 72 MARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREANID 131
Query: 163 GSGELEFNEFCTL 175
G G++ + EF +
Sbjct: 132 GDGQVNYEEFVQM 144
Score = 54.3 bits (129), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 47/86 (54%), Gaps = 5/86 (5%)
Query: 119 AFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTLXXX 178
AF FD++ G+I T +GT+M LG ++ L ++I EVD DG+G ++F EF T+
Sbjct: 15 AFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM--- 71
Query: 179 XXXXXXXXXXXXXXXLREAFMLYDRE 204
+REAF ++D++
Sbjct: 72 --MARKMKDTDSEEEIREAFRVFDKD 95
>pdb|1DEG|A Chain A, The Linker Of Des-Glu84 Calmodulin Is Bent As Seen In The
Crystal Structure
Length = 142
Score = 77.0 bits (188), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 66/113 (58%), Gaps = 6/113 (5%)
Query: 2 VGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTLXXXXXXXXXXXXXXXXXXLR 61
+GT+M LG ++ L ++I EVD DG+G ++F EF T+ +R
Sbjct: 28 LGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEE------IR 81
Query: 62 EAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDFD 114
EAF ++D++GNGYI+ LR +++ L L EE++EMI E + DG G ++++
Sbjct: 82 EAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREANIDGDGQVNYE 134
Score = 75.9 bits (185), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 71/132 (53%), Gaps = 16/132 (12%)
Query: 60 LREAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDF------ 113
+EAF L+D++G+G ITT L ++ L N EL +MI E+D+DG+GTIDF
Sbjct: 8 FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM 67
Query: 114 ----------DVLTRAFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDEDG 163
+ + AF FD++ G I + +M LG + E ++E+I+E + DG
Sbjct: 68 MARKMKDTDSEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREANIDG 127
Query: 164 SGELEFNEFCTL 175
G++ + EF +
Sbjct: 128 DGQVNYEEFVQM 139
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 47/86 (54%), Gaps = 6/86 (6%)
Query: 119 AFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTLXXX 178
AF FD++ G+I T +GT+M LG ++ L ++I EVD DG+G ++F EF T+
Sbjct: 11 AFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM--- 67
Query: 179 XXXXXXXXXXXXXXXLREAFMLYDRE 204
+REAF ++D++
Sbjct: 68 ---MARKMKDTDSEEIREAFRVFDKD 90
>pdb|1CLM|A Chain A, Structure Of Paramecium Tetraurelia Calmodulin At 1.8
Angstroms Resolution
Length = 148
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 71/133 (53%), Gaps = 17/133 (12%)
Query: 60 LREAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDF------ 113
+EAF L+D++G+G ITT L ++ L N EL +MI E+D+DG+GTIDF
Sbjct: 12 FKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSL 71
Query: 114 -----------DVLTRAFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDED 162
+ L AF+ FD++ G I + +M LG + + ++E+I+E D D
Sbjct: 72 MARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADID 131
Query: 163 GSGELEFNEFCTL 175
G G + + EF +
Sbjct: 132 GDGHINYEEFVRM 144
Score = 73.9 bits (180), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 65/117 (55%), Gaps = 5/117 (4%)
Query: 2 VGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTLXXXXXXXXXXXXXXXXXXLR 61
+GT+M LG ++ L ++I EVD DG+G ++F EF +L L
Sbjct: 32 LGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMARKMKEQDSEEE-----LI 86
Query: 62 EAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDFDVLTR 118
EAF ++DR+GNG I+ LR +++ L L +E++EMI E D DG G I+++ R
Sbjct: 87 EAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYEEFVR 143
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 46/86 (53%), Gaps = 5/86 (5%)
Query: 119 AFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTLXXX 178
AF FD++ G+I T +GT+M LG ++ L ++I EVD DG+G ++F EF +L
Sbjct: 15 AFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSL--- 71
Query: 179 XXXXXXXXXXXXXXXLREAFMLYDRE 204
L EAF ++DR+
Sbjct: 72 --MARKMKEQDSEEELIEAFKVFDRD 95
>pdb|1EXR|A Chain A, The 1.0 Angstrom Crystal Structure Of Ca+2 Bound
Calmodulin
pdb|1N0Y|A Chain A, Crystal Structure Of Pb-Bound Calmodulin
pdb|1N0Y|B Chain B, Crystal Structure Of Pb-Bound Calmodulin
pdb|1OSA|A Chain A, Crystal Structure Of Recombinant Paramecium Tetraurelia
Calmodulin At 1.68 Angstroms Resolution
Length = 148
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 71/133 (53%), Gaps = 17/133 (12%)
Query: 60 LREAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDF------ 113
+EAF L+D++G+G ITT L ++ L N EL +MI E+D+DG+GTIDF
Sbjct: 12 FKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSL 71
Query: 114 -----------DVLTRAFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDED 162
+ L AF+ FD++ G I + +M LG + + ++E+I+E D D
Sbjct: 72 MARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADID 131
Query: 163 GSGELEFNEFCTL 175
G G + + EF +
Sbjct: 132 GDGHINYEEFVRM 144
Score = 73.9 bits (180), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 65/117 (55%), Gaps = 5/117 (4%)
Query: 2 VGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTLXXXXXXXXXXXXXXXXXXLR 61
+GT+M LG ++ L ++I EVD DG+G ++F EF +L L
Sbjct: 32 LGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMARKMKEQDSEEE-----LI 86
Query: 62 EAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDFDVLTR 118
EAF ++DR+GNG I+ LR +++ L L +E++EMI E D DG G I+++ R
Sbjct: 87 EAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYEEFVR 143
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 46/86 (53%), Gaps = 5/86 (5%)
Query: 119 AFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTLXXX 178
AF FD++ G+I T +GT+M LG ++ L ++I EVD DG+G ++F EF +L
Sbjct: 15 AFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSL--- 71
Query: 179 XXXXXXXXXXXXXXXLREAFMLYDRE 204
L EAF ++DR+
Sbjct: 72 --MARKMKEQDSEEELIEAFKVFDRD 95
>pdb|3U0K|A Chain A, Crystal Structure Of The Genetically Encoded Calcium
Indicator Rcamp
Length = 440
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 71/133 (53%), Gaps = 17/133 (12%)
Query: 60 LREAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDFD----V 115
+EAF L+D++G+G ITT L ++ L N EL +MI E+D+DG GTIDF +
Sbjct: 304 FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLIM 363
Query: 116 LTR-------------AFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDED 162
+ R AF FD++ G I + +M LG + E ++E+I+E D D
Sbjct: 364 MARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADID 423
Query: 163 GSGELEFNEFCTL 175
G G++ + EF +
Sbjct: 424 GDGQVNYEEFVQM 436
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 64/113 (56%), Gaps = 5/113 (4%)
Query: 2 VGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTLXXXXXXXXXXXXXXXXXXLR 61
+GT+M LG ++ L ++I EVD DG G ++F EF + +R
Sbjct: 324 LGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLIMMARKMKDTDSEEE-----IR 378
Query: 62 EAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDFD 114
EAF ++D++GNGYI+ LR +++ L L EE++EMI E D DG G ++++
Sbjct: 379 EAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 431
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 44/110 (40%), Gaps = 25/110 (22%)
Query: 95 ELNEMIEEIDSDGSGTIDFDVLTRAFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNE 154
E E D DG GT I T +GT+M LG ++ L +
Sbjct: 303 EFKEAFSLFDKDGDGT--------------------ITTKELGTVMRSLGQNPTEAELQD 342
Query: 155 IIKEVDEDGSGELEFNEFCTLXXXXXXXXXXXXXXXXXXLREAFMLYDRE 204
+I EVD DG G ++F EF + +REAF ++D++
Sbjct: 343 MINEVDADGDGTIDFPEFLIM-----MARKMKDTDSEEEIREAFRVFDKD 387
>pdb|1GGZ|A Chain A, Crystal Structure Of The Calmodulin-Like Protein (Hclp)
From Human Epithelial Cells
Length = 148
Score = 74.3 bits (181), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 69/133 (51%), Gaps = 17/133 (12%)
Query: 60 LREAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDF------ 113
+EAF L+D++G+G ITT L ++ L N EL +M+ EID DG+GT+DF
Sbjct: 12 FKEAFSLFDKDGDGCITTRELGTVMRSLGQNPTEAELRDMMSEIDRDGNGTVDFPEFLGM 71
Query: 114 -----------DVLTRAFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDED 162
+ + AF FD++ G + + +M LG S E ++E+I+ D D
Sbjct: 72 MARKMKDTDNEEEIREAFRVFDKDGNGFVSAAELRHVMTRLGEKLSDEEVDEMIRAADTD 131
Query: 163 GSGELEFNEFCTL 175
G G++ + EF +
Sbjct: 132 GDGQVNYEEFVRV 144
Score = 73.9 bits (180), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 66/119 (55%), Gaps = 5/119 (4%)
Query: 2 VGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTLXXXXXXXXXXXXXXXXXXLR 61
+GT+M LG ++ L +++ E+D DG+G ++F EF + +R
Sbjct: 32 LGTVMRSLGQNPTEAELRDMMSEIDRDGNGTVDFPEFLGMMARKMKDTDNEEE-----IR 86
Query: 62 EAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDFDVLTRAF 120
EAF ++D++GNG+++ LR +++ L L EE++EMI D+DG G ++++ R
Sbjct: 87 EAFRVFDKDGNGFVSAAELRHVMTRLGEKLSDEEVDEMIRAADTDGDGQVNYEEFVRVL 145
>pdb|3EKJ|A Chain A, Calcium-Free Gcamp2 (Calcium Binding Deficient Mutant)
Length = 449
Score = 70.9 bits (172), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 65/121 (53%), Gaps = 5/121 (4%)
Query: 2 VGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTLXXXXXXXXXXXXXXXXXXLR 61
+GT+M LG ++ L ++I EV DG+G ++F +F T+ +R
Sbjct: 333 LGTVMRSLGQNPTEAELQDMINEVGADGNGTIDFPQFLTMMARKMKDTDSEEE-----IR 387
Query: 62 EAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDFDVLTRAFE 121
EAF ++ ++GNGYI+ LR +++ L L EE++EMI E DG G ++++ +
Sbjct: 388 EAFRVFGKDGNGYISAAQLRHVMTNLGEKLTDEEVDEMIREAGIDGDGQVNYEQFVQMMT 447
Query: 122 A 122
A
Sbjct: 448 A 448
Score = 70.1 bits (170), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 69/133 (51%), Gaps = 17/133 (12%)
Query: 60 LREAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDFD----V 115
+EAF L+D++G+G ITT L ++ L N EL +MI E+ +DG+GTIDF +
Sbjct: 313 FKEAFSLFDKDGDGGITTKQLGTVMRSLGQNPTEAELQDMINEVGADGNGTIDFPQFLTM 372
Query: 116 LTR-------------AFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDED 162
+ R AF F ++ G I + +M LG + E ++E+I+E D
Sbjct: 373 MARKMKDTDSEEEIREAFRVFGKDGNGYISAAQLRHVMTNLGEKLTDEEVDEMIREAGID 432
Query: 163 GSGELEFNEFCTL 175
G G++ + +F +
Sbjct: 433 GDGQVNYEQFVQM 445
>pdb|1NIW|A Chain A, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|C Chain C, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|E Chain E, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|G Chain G, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1QX7|I Chain I, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|R Chain R, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|A Chain A, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|B Chain B, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|M Chain M, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
Length = 148
Score = 70.9 bits (172), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 62/112 (55%), Gaps = 5/112 (4%)
Query: 2 VGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTLXXXXXXXXXXXXXXXXXXLR 61
+GT+ LG ++ L + I EVD DG+G ++F EF T +R
Sbjct: 32 LGTVXRSLGQNPTEAELQDXINEVDADGNGTIDFPEFLTXXARKXKDTDSEEE-----IR 86
Query: 62 EAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDF 113
EAF ++D++GNGYI+ LR + + L L EE++E I E D DG G +++
Sbjct: 87 EAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDEXIREADIDGDGQVNY 138
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 66/131 (50%), Gaps = 17/131 (12%)
Query: 60 LREAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDF------ 113
+EAF L+D++G+G ITT L + L N EL + I E+D+DG+GTIDF
Sbjct: 12 FKEAFSLFDKDGDGTITTKELGTVXRSLGQNPTEAELQDXINEVDADGNGTIDFPEFLTX 71
Query: 114 -----------DVLTRAFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDED 162
+ + AF FD++ G I + + LG + E ++E I+E D D
Sbjct: 72 XARKXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDEXIREADID 131
Query: 163 GSGELEFNEFC 173
G G++ + EF
Sbjct: 132 GDGQVNYEEFV 142
Score = 50.1 bits (118), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 46/86 (53%), Gaps = 5/86 (5%)
Query: 119 AFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTLXXX 178
AF FD++ G+I T +GT+ LG ++ L + I EVD DG+G ++F EF T
Sbjct: 15 AFSLFDKDGDGTITTKELGTVXRSLGQNPTEAELQDXINEVDADGNGTIDFPEFLTX--- 71
Query: 179 XXXXXXXXXXXXXXXLREAFMLYDRE 204
+REAF ++D++
Sbjct: 72 --XARKXKDTDSEEEIREAFRVFDKD 95
Score = 26.9 bits (58), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 19/31 (61%)
Query: 9 LGHPQSQEALNEIIKEVDEDGSGELEFNEFC 39
LG + E ++E I+E D DG G++ + EF
Sbjct: 112 LGEKLTDEEVDEXIREADIDGDGQVNYEEFV 142
>pdb|1XFX|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 62/112 (55%), Gaps = 5/112 (4%)
Query: 2 VGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTLXXXXXXXXXXXXXXXXXXLR 61
+GT+ LG ++ L + I EVD DG+G ++F EF T +R
Sbjct: 33 LGTVXRSLGQNPTEAELQDXINEVDADGNGTIDFPEFLTXXARKXKDTDSEEE-----IR 87
Query: 62 EAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDF 113
EAF ++D++GNGYI+ LR + + L L EE+++ I E D DG G +++
Sbjct: 88 EAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDQXIREADIDGDGQVNY 139
Score = 68.6 bits (166), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 66/131 (50%), Gaps = 17/131 (12%)
Query: 60 LREAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDF------ 113
+EAF L+D++G+G ITT L + L N EL + I E+D+DG+GTIDF
Sbjct: 13 FKEAFSLFDKDGDGTITTKELGTVXRSLGQNPTEAELQDXINEVDADGNGTIDFPEFLTX 72
Query: 114 -----------DVLTRAFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDED 162
+ + AF FD++ G I + + LG + E +++ I+E D D
Sbjct: 73 XARKXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDQXIREADID 132
Query: 163 GSGELEFNEFC 173
G G++ + EF
Sbjct: 133 GDGQVNYEEFV 143
Score = 50.1 bits (118), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 46/86 (53%), Gaps = 5/86 (5%)
Query: 119 AFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTLXXX 178
AF FD++ G+I T +GT+ LG ++ L + I EVD DG+G ++F EF T
Sbjct: 16 AFSLFDKDGDGTITTKELGTVXRSLGQNPTEAELQDXINEVDADGNGTIDFPEFLTX--- 72
Query: 179 XXXXXXXXXXXXXXXLREAFMLYDRE 204
+REAF ++D++
Sbjct: 73 --XARKXKDTDSEEEIREAFRVFDKD 96
>pdb|1A2X|A Chain A, Complex Of Troponin C With A 47 Residue (1-47) Fragment Of
Troponin I
Length = 159
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 63/121 (52%), Gaps = 2/121 (1%)
Query: 2 VGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTLXXXXXXXXXXXXXXXXXXLR 61
+GT+M MLG ++E L+ II+EVDEDGSG ++F EF L L
Sbjct: 39 LGTVMRMLGQTPTKEELDAIIEEVDEDGSGTIDFEEF--LVMMVRQMKEDAKGKSEEELA 96
Query: 62 EAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDFDVLTRAFE 121
E F ++DR +GYI + L EI ++ EE+ ++++ D + G IDFD + E
Sbjct: 97 ECFRIFDRNADGYIDAEELAEIFRASGEHVTDEEIESLMKDGDKNNDGRIDFDEFLKMME 156
Query: 122 A 122
Sbjct: 157 G 157
Score = 57.0 bits (136), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 63/136 (46%), Gaps = 20/136 (14%)
Query: 60 LREAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDF------ 113
+ AF ++D +G G I+ L ++ L EEL+ +IEE+D DGSGTIDF
Sbjct: 19 FKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTIDFEEFLVM 78
Query: 114 --------------DVLTRAFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEV 159
+ L F FD+ G I + + I G + E + ++K+
Sbjct: 79 MVRQMKEDAKGKSEEELAECFRIFDRNADGYIDAEELAEIFRASGEHVTDEEIESLMKDG 138
Query: 160 DEDGSGELEFNEFCTL 175
D++ G ++F+EF +
Sbjct: 139 DKNNDGRIDFDEFLKM 154
Score = 56.6 bits (135), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 45/85 (52%), Gaps = 2/85 (2%)
Query: 119 AFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTLXXX 178
AF+ FD + G I +GT+M MLG ++E L+ II+EVDEDGSG ++F EF L
Sbjct: 22 AFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTIDFEEF--LVMM 79
Query: 179 XXXXXXXXXXXXXXXLREAFMLYDR 203
L E F ++DR
Sbjct: 80 VRQMKEDAKGKSEEELAECFRIFDR 104
>pdb|1TCF|A Chain A, Crystal Structure Of Calcium-Saturated Rabbit Skeletal
Troponin C
pdb|1TN4|A Chain A, Four Calcium Tnc
pdb|2TN4|A Chain A, Four Calcium Tnc
Length = 159
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 63/121 (52%), Gaps = 2/121 (1%)
Query: 2 VGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTLXXXXXXXXXXXXXXXXXXLR 61
+GT+M MLG ++E L+ II+EVDEDGSG ++F EF + L
Sbjct: 39 LGTVMRMLGQTPTKEELDAIIEEVDEDGSGTIDFEEFLVM--MVRQMKEDAKGKSEEELA 96
Query: 62 EAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDFDVLTRAFE 121
E F ++DR +GYI + L EI ++ EE+ ++++ D + G IDFD + E
Sbjct: 97 ELFRIFDRNADGYIDAEELAEIFRASGEHVTDEEIESLMKDGDKNNDGRIDFDEFLKMME 156
Query: 122 A 122
Sbjct: 157 G 157
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 38/57 (66%)
Query: 119 AFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTL 175
AF+ FD + G I +GT+M MLG ++E L+ II+EVDEDGSG ++F EF +
Sbjct: 22 AFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTIDFEEFLVM 78
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 63/136 (46%), Gaps = 20/136 (14%)
Query: 60 LREAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDF------ 113
+ AF ++D +G G I+ L ++ L EEL+ +IEE+D DGSGTIDF
Sbjct: 19 FKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTIDFEEFLVM 78
Query: 114 --------------DVLTRAFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEV 159
+ L F FD+ G I + + I G + E + ++K+
Sbjct: 79 MVRQMKEDAKGKSEEELAELFRIFDRNADGYIDAEELAEIFRASGEHVTDEEIESLMKDG 138
Query: 160 DEDGSGELEFNEFCTL 175
D++ G ++F+EF +
Sbjct: 139 DKNNDGRIDFDEFLKM 154
>pdb|2LMT|A Chain A, Nmr Structure Of Androcam
pdb|2LMU|A Chain A, Androcam At High Calcium
pdb|2LMV|A Chain A, Androcam At High Calcium With Three Explicit Ca2+
Length = 148
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 63/113 (55%), Gaps = 5/113 (4%)
Query: 2 VGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTLXXXXXXXXXXXXXXXXXXLR 61
+GT+M LG ++ L ++I E + + +G+L F EFC + +R
Sbjct: 32 LGTLMRTLGQNPTEAELQDLIAEAENNNNGQLNFTEFCGIMAKQMRETDTEEE-----MR 86
Query: 62 EAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDFD 114
EAF ++DR+G+G+I+ LR ++ L + EE++EMI E D DG G I+++
Sbjct: 87 EAFKIFDRDGDGFISPAELRFVMINLGEKVTDEEIDEMIREADFDGDGMINYE 139
Score = 53.9 bits (128), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 66/133 (49%), Gaps = 17/133 (12%)
Query: 60 LREAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDF------ 113
++AF+ +D+EG G I T L ++ L N EL ++I E +++ +G ++F
Sbjct: 12 FKDAFVQFDKEGTGKIATRELGTLMRTLGQNPTEAELQDLIAEAENNNNGQLNFTEFCGI 71
Query: 114 -----------DVLTRAFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDED 162
+ + AF+ FD++ G I + +M LG + E ++E+I+E D D
Sbjct: 72 MAKQMRETDTEEEMREAFKIFDRDGDGFISPAELRFVMINLGEKVTDEEIDEMIREADFD 131
Query: 163 GSGELEFNEFCTL 175
G G + + EF +
Sbjct: 132 GDGMINYEEFVWM 144
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 44/86 (51%), Gaps = 5/86 (5%)
Query: 119 AFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTLXXX 178
AF FD+E G I T +GT+M LG ++ L ++I E + + +G+L F EFC +
Sbjct: 15 AFVQFDKEGTGKIATRELGTLMRTLGQNPTEAELQDLIAEAENNNNGQLNFTEFCGI--- 71
Query: 179 XXXXXXXXXXXXXXXLREAFMLYDRE 204
+REAF ++DR+
Sbjct: 72 --MAKQMRETDTEEEMREAFKIFDRD 95
Score = 27.3 bits (59), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 22/37 (59%)
Query: 5 IMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTL 41
+M LG + E ++E+I+E D DG G + + EF +
Sbjct: 108 VMINLGEKVTDEEIDEMIREADFDGDGMINYEEFVWM 144
>pdb|1Y6W|A Chain A, Trapped Intermediate Of Calmodulin
Length = 148
Score = 68.2 bits (165), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 61/112 (54%), Gaps = 5/112 (4%)
Query: 2 VGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTLXXXXXXXXXXXXXXXXXXLR 61
+GT+ LG ++ L + I EVD DG+G + F EF T +R
Sbjct: 32 LGTVXRSLGCNPTEAELQDXINEVDADGNGTINFPEFLTXXARCXKDTDSEEE-----IR 86
Query: 62 EAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDF 113
EAF ++D++GNGYI+ LR + + L L EE++E I E D DG G +++
Sbjct: 87 EAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDEXIREADIDGDGQVNY 138
Score = 67.8 bits (164), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 66/130 (50%), Gaps = 17/130 (13%)
Query: 60 LREAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDF------ 113
+EAF L+D++G+G ITT L + L N EL + I E+D+DG+GTI+F
Sbjct: 12 FKEAFSLFDKDGDGTITTKELGTVXRSLGCNPTEAELQDXINEVDADGNGTINFPEFLTX 71
Query: 114 -----------DVLTRAFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDED 162
+ + AF FD++ G I + + LG + E ++E I+E D D
Sbjct: 72 XARCXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDEXIREADID 131
Query: 163 GSGELEFNEF 172
G G++ + EF
Sbjct: 132 GDGQVNYEEF 141
Score = 47.8 bits (112), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Query: 119 AFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTLXXX 178
AF FD++ G+I T +GT+ LG ++ L + I EVD DG+G + F EF T
Sbjct: 15 AFSLFDKDGDGTITTKELGTVXRSLGCNPTEAELQDXINEVDADGNGTINFPEFLTX--- 71
Query: 179 XXXXXXXXXXXXXXXLREAFMLYDRE 204
+REAF ++D++
Sbjct: 72 --XARCXKDTDSEEEIREAFRVFDKD 95
>pdb|3KF9|A Chain A, Crystal Structure Of The SdcenSKMLCK COMPLEX
pdb|3KF9|C Chain C, Crystal Structure Of The SdcenSKMLCK COMPLEX
Length = 149
Score = 67.8 bits (164), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 66/133 (49%), Gaps = 17/133 (12%)
Query: 60 LREAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDF------ 113
+REAF L+D +G+G I L+ + L EE+ +MI +ID DGSGTIDF
Sbjct: 10 IREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMIADIDKDGSGTIDFEEFLQM 69
Query: 114 -----------DVLTRAFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDED 162
+ + +AF FD ++ G I + + + LG + E L E+I E D D
Sbjct: 70 MTAKMGERDSREEIMKAFRLFDDDETGKISFKNLKRVAKELGENMTDEELQEMIDEADRD 129
Query: 163 GSGELEFNEFCTL 175
G GE+ EF +
Sbjct: 130 GDGEVNEEEFFRI 142
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 55/107 (51%), Gaps = 5/107 (4%)
Query: 6 MEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTLXXXXXXXXXXXXXXXXXXLREAFM 65
M LG +E + ++I ++D+DGSG ++F EF + + +AF
Sbjct: 34 MRALGFEPKKEEIKKMIADIDKDGSGTIDFEEFLQM-----MTAKMGERDSREEIMKAFR 88
Query: 66 LYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTID 112
L+D + G I+ L+ + EL N+ EEL EMI+E D DG G ++
Sbjct: 89 LFDDDETGKISFKNLKRVAKELGENMTDEELQEMIDEADRDGDGEVN 135
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 20/82 (24%)
Query: 94 EELNEMIEEIDSDGSGTIDFDVLTRAFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALN 153
+E+ E + D+DGSGTID L A M LG +E +
Sbjct: 8 QEIREAFDLFDTDGSGTIDAKELKVA--------------------MRALGFEPKKEEIK 47
Query: 154 EIIKEVDEDGSGELEFNEFCTL 175
++I ++D+DGSG ++F EF +
Sbjct: 48 KMIADIDKDGSGTIDFEEFLQM 69
Score = 26.9 bits (58), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 20/37 (54%)
Query: 5 IMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTL 41
+ + LG + E L E+I E D DG GE+ EF +
Sbjct: 106 VAKELGENMTDEELQEMIDEADRDGDGEVNEEEFFRI 142
>pdb|1YTZ|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Activated State
pdb|1YV0|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Free State
pdb|1NCX|A Chain A, Troponin C
pdb|1NCY|A Chain A, Troponin-C, Complex With Manganese
pdb|1NCZ|A Chain A, Troponin C
pdb|1TOP|A Chain A, Structure Of Chicken Skeletal Muscle Troponin-C At 1.78
Angstroms Resolution
Length = 162
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 69/136 (50%), Gaps = 20/136 (14%)
Query: 60 LREAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDF------ 113
+ AF ++D +G G I+T L ++ L N EEL+ +IEE+D DGSGTIDF
Sbjct: 22 FKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVM 81
Query: 114 --------------DVLTRAFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEV 159
+ L F FD+ G I + +G I+ G ++E + +++K+
Sbjct: 82 MVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDS 141
Query: 160 DEDGSGELEFNEFCTL 175
D++ G ++F+EF +
Sbjct: 142 DKNNDGRIDFDEFLKM 157
Score = 64.7 bits (156), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 64/121 (52%), Gaps = 2/121 (1%)
Query: 2 VGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTLXXXXXXXXXXXXXXXXXXLR 61
+GT+M MLG ++E L+ II+EVDEDGSG ++F EF L L
Sbjct: 42 LGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEF--LVMMVRQMKEDAKGKSEEELA 99
Query: 62 EAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDFDVLTRAFE 121
F ++D+ +G+I + L EI+ ++ E++ +++++ D + G IDFD + E
Sbjct: 100 NCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDEFLKMME 159
Query: 122 A 122
Sbjct: 160 G 160
>pdb|2W49|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4U|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
Length = 159
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 69/136 (50%), Gaps = 20/136 (14%)
Query: 60 LREAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDF------ 113
+ AF ++D +G G I+T L ++ L N EEL+ +IEE+D DGSGTIDF
Sbjct: 19 FKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVM 78
Query: 114 --------------DVLTRAFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEV 159
+ L F FD+ G I + +G I+ G ++E + +++K+
Sbjct: 79 MVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDS 138
Query: 160 DEDGSGELEFNEFCTL 175
D++ G ++F+EF +
Sbjct: 139 DKNNDGRIDFDEFLKM 154
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 64/121 (52%), Gaps = 2/121 (1%)
Query: 2 VGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTLXXXXXXXXXXXXXXXXXXLR 61
+GT+M MLG ++E L+ II+EVDEDGSG ++F EF L L
Sbjct: 39 LGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEF--LVMMVRQMKEDAKGKSEEELA 96
Query: 62 EAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDFDVLTRAFE 121
F ++D+ +G+I + L EI+ ++ E++ +++++ D + G IDFD + E
Sbjct: 97 NCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDEFLKMME 156
Query: 122 A 122
Sbjct: 157 G 157
>pdb|5TNC|A Chain A, Refined Crystal Structure Of Troponin C From Turkey
Skeletal Muscle At 2.0 Angstroms Resolution
Length = 162
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 65/121 (53%), Gaps = 2/121 (1%)
Query: 2 VGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTLXXXXXXXXXXXXXXXXXXLR 61
+GT+M MLG ++E L+ II+EVDEDGSG ++F EF L L
Sbjct: 42 LGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEF--LVMMVRQMKEDAKGKSEEELE 99
Query: 62 EAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDFDVLTRAFE 121
+ F ++D+ +G+I + L EI+ ++ E++ +++++ D + G IDFD + E
Sbjct: 100 DCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDEFLKMME 159
Query: 122 A 122
Sbjct: 160 G 160
Score = 64.3 bits (155), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 71/136 (52%), Gaps = 20/136 (14%)
Query: 60 LREAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDFD----V 115
+ AF ++D +G G I+T L ++ L N EEL+ +IEE+D DGSGTIDF+ +
Sbjct: 22 FKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVM 81
Query: 116 LTR----------------AFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEV 159
+ R F FD+ G I + +G I+ G ++E + +++K+
Sbjct: 82 MVRQMKEDAKGKSEEELEDCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDS 141
Query: 160 DEDGSGELEFNEFCTL 175
D++ G ++F+EF +
Sbjct: 142 DKNNDGRIDFDEFLKM 157
>pdb|4TNC|A Chain A, Refined Structure Of Chicken Skeletal Muscle Troponin C In
The Two-Calcium State At 2-Angstroms Resolution
Length = 162
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 65/121 (53%), Gaps = 2/121 (1%)
Query: 2 VGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTLXXXXXXXXXXXXXXXXXXLR 61
+GT+M MLG ++E L+ II+EVDEDGSG ++F EF L L
Sbjct: 42 LGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEF--LVMMVRQMKEDAKGKSEEELA 99
Query: 62 EAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDFDVLTRAFE 121
+ F ++D+ +G+I + L EI+ ++ E++ +++++ D + G IDFD + E
Sbjct: 100 DCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDEFLKMME 159
Query: 122 A 122
Sbjct: 160 G 160
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 69/136 (50%), Gaps = 20/136 (14%)
Query: 60 LREAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDF------ 113
+ AF ++D +G G I+T L ++ L N EEL+ +IEE+D DGSGTIDF
Sbjct: 22 FKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVM 81
Query: 114 --------------DVLTRAFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEV 159
+ L F FD+ G I + +G I+ G ++E + +++K+
Sbjct: 82 MVRQMKEDAKGKSEEELADCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDS 141
Query: 160 DEDGSGELEFNEFCTL 175
D++ G ++F+EF +
Sbjct: 142 DKNNDGRIDFDEFLKM 157
>pdb|3QRX|A Chain A, Chlamydomonas Reinhardtii Centrin Bound To Melittin
Length = 169
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 68/133 (51%), Gaps = 17/133 (12%)
Query: 60 LREAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDF-DVLT- 117
+REAF L+D +G+G I L+ + L EE+ +MI EID DGSGTIDF + LT
Sbjct: 30 IREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTIDFEEFLTM 89
Query: 118 ---------------RAFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDED 162
+AF FD + G+I + + + LG ++E L E+I E D +
Sbjct: 90 MTAKMGERDSREEILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRN 149
Query: 163 GSGELEFNEFCTL 175
E++ +EF +
Sbjct: 150 DDNEIDEDEFIRI 162
Score = 62.0 bits (149), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 56/113 (49%), Gaps = 5/113 (4%)
Query: 6 MEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTLXXXXXXXXXXXXXXXXXXLREAFM 65
M LG +E + ++I E+D+DGSG ++F EF T+ + +AF
Sbjct: 54 MRALGFEPKKEEIKKMISEIDKDGSGTIDFEEFLTMMTAKMGERDSREE-----ILKAFR 108
Query: 66 LYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDFDVLTR 118
L+D + +G IT LR + EL NL EEL EMI E D + ID D R
Sbjct: 109 LFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDNEIDEDEFIR 161
>pdb|1TNW|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
pdb|1TNX|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
Length = 162
Score = 64.3 bits (155), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 68/136 (50%), Gaps = 20/136 (14%)
Query: 60 LREAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDF------ 113
+ AF ++D +G G I+T L ++ L N EEL+ +IEE+D DGSGTIDF
Sbjct: 22 FKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVM 81
Query: 114 --------------DVLTRAFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEV 159
+ L F FD+ G I + +G I+ G +E + +++K+
Sbjct: 82 MVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDS 141
Query: 160 DEDGSGELEFNEFCTL 175
D++ G ++F+EF +
Sbjct: 142 DKNNDGRIDFDEFLKM 157
Score = 63.9 bits (154), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 64/121 (52%), Gaps = 2/121 (1%)
Query: 2 VGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTLXXXXXXXXXXXXXXXXXXLR 61
+GT+M MLG ++E L+ II+EVDEDGSG ++F EF L L
Sbjct: 42 LGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEF--LVMMVRQMKEDAKGKSEEELA 99
Query: 62 EAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDFDVLTRAFE 121
F ++D+ +G+I + L EI+ ++ E++ +++++ D + G IDFD + E
Sbjct: 100 NCFRIFDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDSDKNNDGRIDFDEFLKMME 159
Query: 122 A 122
Sbjct: 160 G 160
>pdb|2OBH|A Chain A, Centrin-Xpc Peptide
pdb|2OBH|B Chain B, Centrin-Xpc Peptide
Length = 143
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 66/133 (49%), Gaps = 17/133 (12%)
Query: 60 LREAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDF-DVLT- 117
+REAF L+D +G G I L+ + L EE+ +MI EID +G+G ++F D LT
Sbjct: 8 IREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNFGDFLTV 67
Query: 118 ---------------RAFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDED 162
+AF+ FD ++ G I + + + LG + E L E+I E D D
Sbjct: 68 MTQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRD 127
Query: 163 GSGELEFNEFCTL 175
G GE+ EF +
Sbjct: 128 GDGEVSEQEFLRI 140
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 55/106 (51%), Gaps = 5/106 (4%)
Query: 6 MEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTLXXXXXXXXXXXXXXXXXXLREAFM 65
M LG +E + ++I E+D++G+G++ F +F T+ + +AF
Sbjct: 32 MRALGFEPKKEEIKKMISEIDKEGTGKMNFGDFLTVMTQKMSEKDTKEE-----ILKAFK 86
Query: 66 LYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTI 111
L+D + G I+ L+ + EL NL EEL EMI+E D DG G +
Sbjct: 87 LFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEV 132
Score = 27.3 bits (59), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 20/37 (54%)
Query: 5 IMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTL 41
+ + LG + E L E+I E D DG GE+ EF +
Sbjct: 104 VAKELGENLTDEELQEMIDEADRDGDGEVSEQEFLRI 140
>pdb|2JT0|A Chain A, Solution Structure Of F104w Cardiac Troponin C
Length = 161
Score = 60.8 bits (146), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 60/113 (53%), Gaps = 2/113 (1%)
Query: 2 VGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTLXXXXXXXXXXXXXXXXXXLR 61
+G +M MLG + E L E+I EVDEDGSG ++F+EF + L
Sbjct: 41 LGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVM--MVRSMKDDSKGKSEEELS 98
Query: 62 EAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDFD 114
+ F ++D+ +GYI D L+ ++ + +++ E++++ D + G ID+D
Sbjct: 99 DLFRMWDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYD 151
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 65/122 (53%), Gaps = 20/122 (16%)
Query: 72 NGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDFD----VLTRA-------- 119
+G I+T L +++ L N EEL EMI+E+D DGSGT+DFD ++ R+
Sbjct: 33 DGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGK 92
Query: 120 --------FEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNE 171
F +D+ G I D + +++ G +++ + E++K+ D++ G ++++E
Sbjct: 93 SEEELSDLFRMWDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDE 152
Query: 172 FC 173
F
Sbjct: 153 FL 154
Score = 50.4 bits (119), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 32/47 (68%)
Query: 129 GSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTL 175
GSI T +G +M MLG + E L E+I EVDEDGSG ++F+EF +
Sbjct: 34 GSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVM 80
>pdb|2JT8|A Chain A, Solution Structure Of The F153-To-5-Flurotryptophan Mutant
Of Human Cardiac Troponin C
Length = 161
Score = 60.5 bits (145), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 60/113 (53%), Gaps = 2/113 (1%)
Query: 2 VGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTLXXXXXXXXXXXXXXXXXXLR 61
+G +M MLG + E L E+I EVDEDGSG ++F+EF + L
Sbjct: 41 LGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVM--MVRSMKDDSKGKSEEELS 98
Query: 62 EAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDFD 114
+ F ++D+ +GYI D L+ ++ + +++ E++++ D + G ID+D
Sbjct: 99 DLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYD 151
Score = 53.5 bits (127), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 64/120 (53%), Gaps = 20/120 (16%)
Query: 72 NGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDFD----VLTRA-------- 119
+G I+T L +++ L N EEL EMI+E+D DGSGT+DFD ++ R+
Sbjct: 33 DGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGK 92
Query: 120 --------FEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNE 171
F FD+ G I D + +++ G +++ + E++K+ D++ G ++++E
Sbjct: 93 SEEELSDLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDE 152
Score = 50.4 bits (119), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 32/47 (68%)
Query: 129 GSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTL 175
GSI T +G +M MLG + E L E+I EVDEDGSG ++F+EF +
Sbjct: 34 GSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVM 80
>pdb|2JT3|A Chain A, Solution Structure Of F153w Cardiac Troponin C
Length = 161
Score = 60.5 bits (145), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 60/113 (53%), Gaps = 2/113 (1%)
Query: 2 VGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTLXXXXXXXXXXXXXXXXXXLR 61
+G +M MLG + E L E+I EVDEDGSG ++F+EF + L
Sbjct: 41 LGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVM--MVRSMKDDSKGKSEEELS 98
Query: 62 EAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDFD 114
+ F ++D+ +GYI D L+ ++ + +++ E++++ D + G ID+D
Sbjct: 99 DLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYD 151
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 65/122 (53%), Gaps = 20/122 (16%)
Query: 72 NGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDFD----VLTRA-------- 119
+G I+T L +++ L N EEL EMI+E+D DGSGT+DFD ++ R+
Sbjct: 33 DGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGK 92
Query: 120 --------FEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNE 171
F FD+ G I D + +++ G +++ + E++K+ D++ G ++++E
Sbjct: 93 SEEELSDLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDE 152
Query: 172 FC 173
+
Sbjct: 153 WL 154
Score = 50.4 bits (119), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 32/47 (68%)
Query: 129 GSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTL 175
GSI T +G +M MLG + E L E+I EVDEDGSG ++F+EF +
Sbjct: 34 GSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVM 80
>pdb|2LHI|A Chain A, Solution Structure Of Ca2+CNA1 PEPTIDE-Bound Ycam
Length = 176
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 62/111 (55%), Gaps = 6/111 (5%)
Query: 2 VGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTLXXXXXXXXXXXXXXXXXXLR 61
+ T+M LG S+ +N+++ E+D DG+ ++EF+EF L L
Sbjct: 33 LATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLAL-----MSRQLKSNDSEQELL 87
Query: 62 EAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTID 112
EAF ++D+ G+G I+ L+ +++ + L E+++M+ E+ SDGSG I+
Sbjct: 88 EAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDDMLREV-SDGSGEIN 137
Score = 57.4 bits (137), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 69/133 (51%), Gaps = 18/133 (13%)
Query: 60 LREAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDFD----V 115
+EAF L+D++ NG I++ L ++ L + E+N+++ EID DG+ I+F +
Sbjct: 13 FKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLAL 72
Query: 116 LTR-------------AFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDED 162
++R AF+ FD+ G I + ++ +G + ++++++EV D
Sbjct: 73 MSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDDMLREVS-D 131
Query: 163 GSGELEFNEFCTL 175
GSGE+ +F L
Sbjct: 132 GSGEINIQQFAAL 144
>pdb|1LKJ|A Chain A, Nmr Structure Of Apo Calmodulin From Yeast Saccharomyces
Cerevisiae
Length = 146
Score = 59.3 bits (142), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 62/111 (55%), Gaps = 6/111 (5%)
Query: 2 VGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTLXXXXXXXXXXXXXXXXXXLR 61
+ T+M LG S+ +N+++ E+D DG+ ++EF+EF L L
Sbjct: 32 LATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLAL-----MSRQLKSNDSEQELL 86
Query: 62 EAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTID 112
EAF ++D+ G+G I+ L+ +++ + L E+++M+ E+ SDGSG I+
Sbjct: 87 EAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDDMLREV-SDGSGEIN 136
Score = 57.4 bits (137), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 69/133 (51%), Gaps = 18/133 (13%)
Query: 60 LREAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDFD----V 115
+EAF L+D++ NG I++ L ++ L + E+N+++ EID DG+ I+F +
Sbjct: 12 FKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLAL 71
Query: 116 LTR-------------AFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDED 162
++R AF+ FD+ G I + ++ +G + ++++++EV D
Sbjct: 72 MSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDDMLREV-SD 130
Query: 163 GSGELEFNEFCTL 175
GSGE+ +F L
Sbjct: 131 GSGEINIQQFAAL 143
>pdb|2KSZ|A Chain A, The Solution Structure Of The Magnesium Bound Soybean
Calmod Isoform 4 N-Domain
Length = 76
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 40/55 (72%)
Query: 60 LREAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDFD 114
+EAF L+D++G+G IT + L +I LD N EEL +MI E+D+DG+GTI+FD
Sbjct: 12 FKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEFD 66
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 36/57 (63%)
Query: 119 AFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTL 175
AF FD++ G I + + T++ L ++E L ++I EVD DG+G +EF+EF +L
Sbjct: 15 AFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEFDEFLSL 71
Score = 35.8 bits (81), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 27/40 (67%)
Query: 2 VGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTL 41
+ T++ L ++E L ++I EVD DG+G +EF+EF +L
Sbjct: 32 LATVIRSLDQNPTEEELQDMISEVDADGNGTIEFDEFLSL 71
>pdb|1SMG|A Chain A, Calcium-Bound E41a Mutant Of The N-Domain Of Chicken
Troponin C, Nmr, 40 Structures
Length = 90
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 39/57 (68%)
Query: 119 AFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTL 175
AF+ FD + G I T +GT+M MLG ++E L+ II+EVDEDGSG ++F EF +
Sbjct: 25 AFDMFDADGGGDISTKALGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVM 81
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 36/55 (65%)
Query: 60 LREAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDFD 114
+ AF ++D +G G I+T L ++ L N EEL+ +IEE+D DGSGTIDF+
Sbjct: 22 FKAAFDMFDADGGGDISTKALGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFE 76
Score = 47.0 bits (110), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 30/40 (75%)
Query: 2 VGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTL 41
+GT+M MLG ++E L+ II+EVDEDGSG ++F EF +
Sbjct: 42 LGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVM 81
>pdb|2ROA|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 N-Terminal Domain
Length = 79
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 40/55 (72%)
Query: 60 LREAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDFD 114
+EAF L+D++G+G IT + L +I LD N EEL +MI E+D+DG+GTI+FD
Sbjct: 12 FKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEFD 66
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 36/57 (63%)
Query: 119 AFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTL 175
AF FD++ G I + + T++ L ++E L ++I EVD DG+G +EF+EF +L
Sbjct: 15 AFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEFDEFLSL 71
Score = 36.2 bits (82), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 27/40 (67%)
Query: 2 VGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTL 41
+ T++ L ++E L ++I EVD DG+G +EF+EF +L
Sbjct: 32 LATVIRSLDQNPTEEELQDMISEVDADGNGTIEFDEFLSL 71
>pdb|2JTZ|A Chain A, Solution Structure And Chemical Shift Assignments Of The
F104-To-5-Flurotryptophan Mutant Of Cardiac Troponin C
Length = 161
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 59/113 (52%), Gaps = 2/113 (1%)
Query: 2 VGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTLXXXXXXXXXXXXXXXXXXLR 61
+G +M MLG + E L E+I EVDEDGSG ++F+EF + L
Sbjct: 41 LGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVM--MVRSMKDDSKGKSEEELS 98
Query: 62 EAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDFD 114
+ F + D+ +GYI D L+ ++ + +++ E++++ D + G ID+D
Sbjct: 99 DLFRMXDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYD 151
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 64/122 (52%), Gaps = 20/122 (16%)
Query: 72 NGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDFD----VLTRA-------- 119
+G I+T L +++ L N EEL EMI+E+D DGSGT+DFD ++ R+
Sbjct: 33 DGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGK 92
Query: 120 --------FEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNE 171
F D+ G I D + +++ G +++ + E++K+ D++ G ++++E
Sbjct: 93 SEEELSDLFRMXDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDE 152
Query: 172 FC 173
F
Sbjct: 153 FL 154
Score = 50.4 bits (119), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 32/47 (68%)
Query: 129 GSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTL 175
GSI T +G +M MLG + E L E+I EVDEDGSG ++F+EF +
Sbjct: 34 GSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVM 80
>pdb|1DTL|A Chain A, Crystal Structure Of Calcium-Saturated (3ca2+) Cardiac
Troponin C Complexed With The Calcium Sensitizer
Bepridil At 2.15 A Resolution
pdb|1J1D|A Chain A, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1D|D Chain D, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|A Chain A, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|D Chain D, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
Length = 161
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 60/113 (53%), Gaps = 2/113 (1%)
Query: 2 VGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTLXXXXXXXXXXXXXXXXXXLR 61
+G +M MLG + E L E+I EVDEDGSG ++F+EF + L
Sbjct: 41 LGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVM--MVRSMKDDSKGKSEEELS 98
Query: 62 EAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDFD 114
+ F ++D+ +GYI + L+ ++ + +++ E++++ D + G ID+D
Sbjct: 99 DLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYD 151
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 65/122 (53%), Gaps = 20/122 (16%)
Query: 72 NGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDFD----VLTRA-------- 119
+G I+T L +++ L N EEL EMI+E+D DGSGT+DFD ++ R+
Sbjct: 33 DGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGK 92
Query: 120 --------FEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNE 171
F FD+ G I + + +++ G +++ + E++K+ D++ G ++++E
Sbjct: 93 SEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDE 152
Query: 172 FC 173
F
Sbjct: 153 FL 154
Score = 50.4 bits (119), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 32/47 (68%)
Query: 129 GSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTL 175
GSI T +G +M MLG + E L E+I EVDEDGSG ++F+EF +
Sbjct: 34 GSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVM 80
>pdb|1AJ4|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 1
Structure
Length = 161
Score = 58.2 bits (139), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 60/113 (53%), Gaps = 2/113 (1%)
Query: 2 VGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTLXXXXXXXXXXXXXXXXXXLR 61
+G +M MLG + E L E+I EVDEDGSG ++F+EF + L
Sbjct: 41 LGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVM--MVRSMKDDSKGKTEEELS 98
Query: 62 EAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDFD 114
+ F ++D+ +GYI + L+ ++ + +++ E++++ D + G ID+D
Sbjct: 99 DLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYD 151
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 65/122 (53%), Gaps = 20/122 (16%)
Query: 72 NGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDFD----VLTRA-------- 119
+G I+T L +++ L N EEL EMI+E+D DGSGT+DFD ++ R+
Sbjct: 33 DGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGK 92
Query: 120 --------FEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNE 171
F FD+ G I + + +++ G +++ + E++K+ D++ G ++++E
Sbjct: 93 TEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDE 152
Query: 172 FC 173
F
Sbjct: 153 FL 154
Score = 50.4 bits (119), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 32/47 (68%)
Query: 129 GSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTL 175
GSI T +G +M MLG + E L E+I EVDEDGSG ++F+EF +
Sbjct: 34 GSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVM 80
>pdb|1LA0|A Chain A, Solution Structure Of Calcium Saturated Cardiac Troponin C
In The Troponin C-Troponin I Complex
Length = 161
Score = 58.2 bits (139), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 60/113 (53%), Gaps = 2/113 (1%)
Query: 2 VGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTLXXXXXXXXXXXXXXXXXXLR 61
+G +M MLG + E L E+I EVDEDGSG ++F+EF L L
Sbjct: 41 LGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEF--LVMMVRCMKDDSKGKTEEELS 98
Query: 62 EAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDFD 114
+ F ++D+ +GYI + L+ ++ + +++ E++++ D + G ID+D
Sbjct: 99 DLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYD 151
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 63/121 (52%), Gaps = 20/121 (16%)
Query: 72 NGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDFD----------------- 114
+G I+T L +++ L N EEL EMI+E+D DGSGT+DFD
Sbjct: 33 DGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRCMKDDSKGK 92
Query: 115 ---VLTRAFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNE 171
L+ F FD+ G I + + +++ G +++ + E++K+ D++ G ++++E
Sbjct: 93 TEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDE 152
Query: 172 F 172
F
Sbjct: 153 F 153
Score = 48.1 bits (113), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 31/47 (65%)
Query: 129 GSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTL 175
G I T +G +M MLG + E L E+I EVDEDGSG ++F+EF +
Sbjct: 34 GCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVM 80
>pdb|1TRF|A Chain A, Solution Structure Of The Tr1c Fragment Of Skeletal Muscle
Troponin-C
Length = 76
Score = 57.8 bits (138), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 39/57 (68%)
Query: 119 AFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTL 175
AF+ FD + G I T +GT+M MLG ++E L+ II+EVDEDGSG ++F EF +
Sbjct: 14 AFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVM 70
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 36/55 (65%)
Query: 60 LREAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDFD 114
+ AF ++D +G G I+T L ++ L N EEL+ +IEE+D DGSGTIDF+
Sbjct: 11 FKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFE 65
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 30/40 (75%)
Query: 2 VGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTL 41
+GT+M MLG ++E L+ II+EVDEDGSG ++F EF +
Sbjct: 31 LGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVM 70
>pdb|1AVS|A Chain A, X-Ray Crystallographic Study Of Calcium-Saturated N-
Terminal Domain Of Troponin C
pdb|1AVS|B Chain B, X-Ray Crystallographic Study Of Calcium-Saturated N-
Terminal Domain Of Troponin C
pdb|1BLQ|A Chain A, Structure And Interaction Site Of The Regulatory Domain Of
Troponin-C When Complexed With The 96-148 Region Of
Troponin-I, Nmr, 29 Structures
pdb|1SKT|A Chain A, Solution Structure Of Apo N-Domain Of Troponin C, Nmr, 40
Structures
pdb|1TNP|A Chain A, Structures Of The Apo And Calcium Troponin-C Regulatory
Domains: The Muscle Contraction Switch
pdb|1TNQ|A Chain A, Structures Of The Apo And Calcium Troponin-C Regulatory
Domains: The Muscle Contraction Switch
pdb|1ZAC|A Chain A, N-Domain Of Troponin C From Chicken Skeletal Muscle, Nmr,
Minimized Average Structure
Length = 90
Score = 57.8 bits (138), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 39/57 (68%)
Query: 119 AFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTL 175
AF+ FD + G I T +GT+M MLG ++E L+ II+EVDEDGSG ++F EF +
Sbjct: 25 AFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVM 81
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 36/55 (65%)
Query: 60 LREAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDFD 114
+ AF ++D +G G I+T L ++ L N EEL+ +IEE+D DGSGTIDF+
Sbjct: 22 FKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFE 76
Score = 47.0 bits (110), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 30/40 (75%)
Query: 2 VGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTL 41
+GT+M MLG ++E L+ II+EVDEDGSG ++F EF +
Sbjct: 42 LGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVM 81
>pdb|4DS7|A Chain A, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|B Chain B, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|C Chain C, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|D Chain D, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
Length = 147
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 60/111 (54%), Gaps = 6/111 (5%)
Query: 2 VGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTLXXXXXXXXXXXXXXXXXXLR 61
+ T+M LG S+ + +++ E+D DG+ +EF+EF L L
Sbjct: 33 LATVMRSLGLSPSEAEVADLMNEIDVDGNHAIEFSEFLALMSRQLKCNDSEQE-----LL 87
Query: 62 EAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTID 112
EAF ++D+ G+G I+ L+ +++ + L E++EM+ E+ SDGSG I+
Sbjct: 88 EAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDEMLREV-SDGSGEIN 137
Score = 53.9 bits (128), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 67/133 (50%), Gaps = 18/133 (13%)
Query: 60 LREAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDFD----V 115
+EAF L+D++ +G I+ L ++ L + E+ +++ EID DG+ I+F +
Sbjct: 13 FKEAFALFDKDNSGSISASELATVMRSLGLSPSEAEVADLMNEIDVDGNHAIEFSEFLAL 72
Query: 116 LTR-------------AFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDED 162
++R AF+ FD+ G I + ++ +G + ++E+++EV D
Sbjct: 73 MSRQLKCNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDEMLREVS-D 131
Query: 163 GSGELEFNEFCTL 175
GSGE+ +F L
Sbjct: 132 GSGEINIKQFAAL 144
>pdb|2LQC|A Chain A, Nmr Solution Structure Of A Ca2+-Calmodulin With A Binding
Motif (Nscate) Peptide From The N-Terminal Cytoplasmic
Domain Of The L-Type Voltage-Cated Calcium Channel
Alpha1c Subunit
Length = 77
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 37/54 (68%)
Query: 60 LREAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDF 113
+EAF L+D++G+G ITT L ++ L N EL +MI E+D+DG+GTIDF
Sbjct: 12 FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 65
Score = 51.2 bits (121), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 37/57 (64%)
Query: 119 AFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTL 175
AF FD++ G+I T +GT+M LG ++ L ++I EVD DG+G ++F EF T+
Sbjct: 15 AFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM 71
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 27/40 (67%)
Query: 2 VGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTL 41
+GT+M LG ++ L ++I EVD DG+G ++F EF T+
Sbjct: 32 LGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM 71
>pdb|3UCT|A Chain A, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
pdb|3UCT|B Chain B, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
pdb|3UCW|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|B Chain B, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|C Chain C, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|D Chain D, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCY|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
Length = 79
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 37/54 (68%)
Query: 60 LREAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDF 113
+EAF L+D++G+G ITT L ++ L N EL +MI E+D+DG+GTIDF
Sbjct: 12 FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 65
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 37/57 (64%)
Query: 119 AFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTL 175
AF FD++ G+I T +GT+M LG ++ L ++I EVD DG+G ++F EF T+
Sbjct: 15 AFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM 71
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 27/40 (67%)
Query: 2 VGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTL 41
+GT+M LG ++ L ++I EVD DG+G ++F EF T+
Sbjct: 32 LGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM 71
>pdb|2I08|A Chain A, Solvation Effect In Conformational Changes Of Ef-Hand
Proteins: X-Ray Structure Of Ca2+-Saturated Double
Mutant Q41l-K75i Of N-Domain Of Calmodulin
Length = 78
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 37/54 (68%)
Query: 60 LREAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDF 113
+EAF LYD++G+G ITT L ++ L N EL +MI E+D+DG+GTIDF
Sbjct: 12 FKEAFSLYDKDGDGTITTKELGTVMRSLGLNPTEAELQDMINEVDADGNGTIDF 65
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 37/57 (64%)
Query: 119 AFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTL 175
AF +D++ G+I T +GT+M LG ++ L ++I EVD DG+G ++F EF T+
Sbjct: 15 AFSLYDKDGDGTITTKELGTVMRSLGLNPTEAELQDMINEVDADGNGTIDFPEFLTM 71
Score = 38.1 bits (87), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 27/40 (67%)
Query: 2 VGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTL 41
+GT+M LG ++ L ++I EVD DG+G ++F EF T+
Sbjct: 32 LGTVMRSLGLNPTEAELQDMINEVDADGNGTIDFPEFLTM 71
>pdb|1F70|A Chain A, Refined Solution Structure Of Calmodulin N-Terminal Domain
pdb|2PQ3|A Chain A, N-Terminal Calmodulin Zn-Trapped Intermediate
pdb|2KUG|A Chain A, Halothane Binds To Druggable Sites In Calcium-Calmodulin:
Solution Structure Of Halothane-Cam N-Terminal Domain
Length = 76
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 37/54 (68%)
Query: 60 LREAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDF 113
+EAF L+D++G+G ITT L ++ L N EL +MI E+D+DG+GTIDF
Sbjct: 12 FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 65
Score = 51.2 bits (121), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 37/57 (64%)
Query: 119 AFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTL 175
AF FD++ G+I T +GT+M LG ++ L ++I EVD DG+G ++F EF T+
Sbjct: 15 AFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM 71
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 27/40 (67%)
Query: 2 VGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTL 41
+GT+M LG ++ L ++I EVD DG+G ++F EF T+
Sbjct: 32 LGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM 71
>pdb|3B32|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-75
Length = 75
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 37/54 (68%)
Query: 60 LREAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDF 113
+EAF L+D++G+G ITT L ++ L N EL +MI E+D+DG+GTIDF
Sbjct: 12 FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 65
Score = 51.2 bits (121), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 37/57 (64%)
Query: 119 AFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTL 175
AF FD++ G+I T +GT+M LG ++ L ++I EVD DG+G ++F EF T+
Sbjct: 15 AFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM 71
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 27/40 (67%)
Query: 2 VGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTL 41
+GT+M LG ++ L ++I EVD DG+G ++F EF T+
Sbjct: 32 LGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM 71
>pdb|1AK8|A Chain A, Nmr Solution Structure Of Cerium-Loaded Calmodulin Amino-
Terminal Domain (Ce2-Tr1c), 23 Structures
Length = 76
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 37/54 (68%)
Query: 60 LREAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDF 113
+EAF L+D++G+G ITT L ++ L N EL +MI E+D+DG+GTIDF
Sbjct: 13 FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 66
Score = 51.2 bits (121), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 37/57 (64%)
Query: 119 AFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTL 175
AF FD++ G+I T +GT+M LG ++ L ++I EVD DG+G ++F EF T+
Sbjct: 16 AFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM 72
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 27/40 (67%)
Query: 2 VGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTL 41
+GT+M LG ++ L ++I EVD DG+G ++F EF T+
Sbjct: 33 LGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM 72
>pdb|2LLO|A Chain A, Solution Nmr-Derived Structure Of Calmodulin N-Lobe Bound
With Er Alpha Peptide
Length = 80
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 37/54 (68%)
Query: 60 LREAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDF 113
+EAF L+D++G+G ITT L ++ L N EL +MI E+D+DG+GTIDF
Sbjct: 12 FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 65
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 37/57 (64%)
Query: 119 AFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTL 175
AF FD++ G+I T +GT+M LG ++ L ++I EVD DG+G ++F EF T+
Sbjct: 15 AFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM 71
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 27/40 (67%)
Query: 2 VGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTL 41
+GT+M LG ++ L ++I EVD DG+G ++F EF T+
Sbjct: 32 LGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM 71
>pdb|1J7O|A Chain A, Solution Structure Of Calcium-calmodulin N-terminal Domain
Length = 76
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 37/54 (68%)
Query: 60 LREAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDF 113
+EAF L+D++G+G ITT L ++ L N EL +MI E+D+DG+GTIDF
Sbjct: 12 FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 65
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 37/57 (64%)
Query: 119 AFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTL 175
AF FD++ G+I T +GT+M LG ++ L ++I EVD DG+G ++F EF T+
Sbjct: 15 AFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM 71
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 27/40 (67%)
Query: 2 VGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTL 41
+GT+M LG ++ L ++I EVD DG+G ++F EF T+
Sbjct: 32 LGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM 71
>pdb|2RO8|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 N-Terminal Domain
Length = 79
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 37/54 (68%)
Query: 60 LREAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDF 113
+EAF L+D++G+G ITT L ++ L N EL +MI E+D+DG+GTIDF
Sbjct: 12 FKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 65
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 35/57 (61%)
Query: 119 AFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTL 175
AF FD++ G I T +GT+M LG ++ L ++I EVD DG+G ++F EF L
Sbjct: 15 AFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNL 71
Score = 38.1 bits (87), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 26/40 (65%)
Query: 2 VGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTL 41
+GT+M LG ++ L ++I EVD DG+G ++F EF L
Sbjct: 32 LGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNL 71
>pdb|3IFK|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
pdb|3IFK|B Chain B, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
Length = 90
Score = 54.7 bits (130), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 37/54 (68%)
Query: 60 LREAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDF 113
+EAF L+D++G+G ITT L ++ L N EL +MI E+D+DG+GTIDF
Sbjct: 12 FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 65
Score = 51.2 bits (121), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 37/57 (64%)
Query: 119 AFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTL 175
AF FD++ G+I T +GT+M LG ++ L ++I EVD DG+G ++F EF T+
Sbjct: 15 AFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM 71
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 27/40 (67%)
Query: 2 VGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTL 41
+GT+M LG ++ L ++I EVD DG+G ++F EF T+
Sbjct: 32 LGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM 71
>pdb|1YRU|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of Bordetella
Pertussis In Presence Of C-Terminal Calmodulin And 1mm
Calcium Chloride
pdb|1YRT|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of Bordetella
Pertussis In Presence Of C-Terminal Calmodulin
Length = 74
Score = 54.7 bits (130), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 38/54 (70%)
Query: 60 LREAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDF 113
+REAF ++D++GNGYI+ LR +++ L L EE++EMI E D DG G +++
Sbjct: 11 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNY 64
Score = 40.0 bits (92), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 33/60 (55%)
Query: 116 LTRAFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTL 175
+ AF FD++ G I + +M LG + E ++E+I+E D DG G++ + EF +
Sbjct: 11 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 70
Score = 30.8 bits (68), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 23/37 (62%)
Query: 5 IMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTL 41
+M LG + E ++E+I+E D DG G++ + EF +
Sbjct: 34 VMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 70
>pdb|1F71|A Chain A, Refined Solution Structure Of Calmodulin C-Terminal Domain
pdb|1J7P|A Chain A, Solution Structure Of Calcium Calmodulin C-Terminal Domain
pdb|2K3S|B Chain B, Haddock-Derived Structure Of The Ch-Domain Of The
Smoothelin-Like 1 Complexed With The C-Domain Of
Apocalmodulin
pdb|2KUH|A Chain A, Halothane Binds To Druggable Sites In Calcium-Calmodulin:
Solution Structure Of Halothane-Cam C-Terminal Domain
pdb|2LLQ|A Chain A, Solution Nmr-Derived Structure Of Calmodulin C-Lobe Bound
With Er Alpha Peptide
Length = 67
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 39/55 (70%)
Query: 60 LREAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDFD 114
+REAF ++D++GNGYI+ LR +++ L L EE++EMI E D DG G ++++
Sbjct: 4 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 58
Score = 40.0 bits (92), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 33/60 (55%)
Query: 116 LTRAFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTL 175
+ AF FD++ G I + +M LG + E ++E+I+E D DG G++ + EF +
Sbjct: 4 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 63
Score = 30.4 bits (67), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 23/37 (62%)
Query: 5 IMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTL 41
+M LG + E ++E+I+E D DG G++ + EF +
Sbjct: 27 VMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 63
>pdb|1CMF|A Chain A, Nmr Solution Structure Of Apo Calmodulin Carboxy-Terminal
Domain
pdb|1CMG|A Chain A, Nmr Solution Structure Of Calcium-Loaded Calmodulin
Carboxy- Terminal Domain
Length = 73
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 38/54 (70%)
Query: 60 LREAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDF 113
+REAF ++D++GNGYI+ LR +++ L L EE++EMI E D DG G +++
Sbjct: 10 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNY 63
Score = 40.4 bits (93), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 33/60 (55%)
Query: 116 LTRAFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTL 175
+ AF FD++ G I + +M LG + E ++E+I+E D DG G++ + EF +
Sbjct: 10 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 69
Score = 30.8 bits (68), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 23/37 (62%)
Query: 5 IMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTL 41
+M LG + E ++E+I+E D DG G++ + EF +
Sbjct: 33 VMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 69
>pdb|1SW8|A Chain A, Solution Structure Of The N-Terminal Domain Of Human N60d
Calmodulin Refined With Paramagnetism Based Strategy
Length = 79
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 36/54 (66%)
Query: 60 LREAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDF 113
+EAF L+D++G+G ITT L ++ L N EL +MI E+D+DG GTIDF
Sbjct: 12 FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDF 65
Score = 50.8 bits (120), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 36/57 (63%)
Query: 119 AFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTL 175
AF FD++ G+I T +GT+M LG ++ L ++I EVD DG G ++F EF T+
Sbjct: 15 AFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTM 71
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 26/40 (65%)
Query: 2 VGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTL 41
+GT+M LG ++ L ++I EVD DG G ++F EF T+
Sbjct: 32 LGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTM 71
>pdb|1ZOT|B Chain B, Crystal Structure Analysis Of The CyaaC-Cam With Pmeapp
Length = 69
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 39/55 (70%)
Query: 60 LREAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDFD 114
+REAF ++D++GNGYI+ LR +++ L L EE++EMI E D DG G ++++
Sbjct: 7 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 61
Score = 40.4 bits (93), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 33/60 (55%)
Query: 116 LTRAFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTL 175
+ AF FD++ G I + +M LG + E ++E+I+E D DG G++ + EF +
Sbjct: 7 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 66
Score = 30.4 bits (67), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 23/37 (62%)
Query: 5 IMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTL 41
+M LG + E ++E+I+E D DG G++ + EF +
Sbjct: 30 VMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 66
>pdb|1FW4|A Chain A, Crystal Structure Of E. Coli Fragment Tr2c From Calmodulin
To 1.7 A Resolution
pdb|2LQP|A Chain A, Nmr Solution Structure Of The Ca2+-Calmodulin C-Terminal
Domain In A Complex With A Peptide (Nscate) From The
L-Type Voltage-Gated Calcium Channel Alpha1c Subunit
Length = 71
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 38/54 (70%)
Query: 60 LREAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDF 113
+REAF ++D++GNGYI+ LR +++ L L EE++EMI E D DG G +++
Sbjct: 8 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNY 61
Score = 40.4 bits (93), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 33/60 (55%)
Query: 116 LTRAFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTL 175
+ AF FD++ G I + +M LG + E ++E+I+E D DG G++ + EF +
Sbjct: 8 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 67
Score = 30.8 bits (68), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 23/37 (62%)
Query: 5 IMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTL 41
+M LG + E ++E+I+E D DG G++ + EF +
Sbjct: 31 VMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 67
>pdb|2COL|B Chain B, Crystal Structure Analysis Of CyaaC-Cam With Pyrophosphate
Length = 67
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 39/55 (70%)
Query: 60 LREAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDFD 114
+REAF ++D++GNGYI+ LR +++ L L EE++EMI E D DG G ++++
Sbjct: 7 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 61
Score = 40.4 bits (93), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 33/60 (55%)
Query: 116 LTRAFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTL 175
+ AF FD++ G I + +M LG + E ++E+I+E D DG G++ + EF +
Sbjct: 7 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 66
Score = 30.4 bits (67), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 23/37 (62%)
Query: 5 IMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTL 41
+M LG + E ++E+I+E D DG G++ + EF +
Sbjct: 30 VMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 66
>pdb|2RRT|A Chain A, Solution Structure Of Magnesium-Bound Form Of Calmodulin
C-Domain E104dE140D MUTANT
Length = 72
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 38/54 (70%)
Query: 60 LREAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDF 113
+REAF ++D++GNGYI+ LR +++ L L EE++EMI E D DG G +++
Sbjct: 9 IREAFRVFDKDGNGYISAADLRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNY 62
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 33/60 (55%)
Query: 116 LTRAFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTL 175
+ AF FD++ G I + +M LG + E ++E+I+E D DG G++ + +F +
Sbjct: 9 IREAFRVFDKDGNGYISAADLRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEDFVQM 68
Score = 29.6 bits (65), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 12/37 (32%), Positives = 23/37 (62%)
Query: 5 IMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTL 41
+M LG + E ++E+I+E D DG G++ + +F +
Sbjct: 32 VMTNLGEKLTDEEVDEMIREADIDGDGQVNYEDFVQM 68
>pdb|1NPQ|A Chain A, Structure Of A Rhodamine-Labeled N-Domain Troponin C
Mutant (Ca2+ Saturated) In Complex With Skeletal
Troponin I 115- 131
Length = 90
Score = 53.9 bits (128), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 37/57 (64%)
Query: 119 AFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTL 175
AF+ FD + G I T +GT+M MLG ++ L+ II EVDEDGSG ++F EF +
Sbjct: 25 AFDMFDADGGGDISTKELGTVMRMLGQNPTKCELDAIICEVDEDGSGTIDFEEFLVM 81
Score = 43.9 bits (102), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 34/55 (61%)
Query: 60 LREAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDFD 114
+ AF ++D +G G I+T L ++ L N EL+ +I E+D DGSGTIDF+
Sbjct: 22 FKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKCELDAIICEVDEDGSGTIDFE 76
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 28/40 (70%)
Query: 2 VGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTL 41
+GT+M MLG ++ L+ II EVDEDGSG ++F EF +
Sbjct: 42 LGTVMRMLGQNPTKCELDAIICEVDEDGSGTIDFEEFLVM 81
>pdb|3TZ1|A Chain A, Crystal Structure Of The Ca2+-saturated C-terminal Domain
Of Akazara Scallop Troponin C In Complex With A Troponin
I Fragment
Length = 74
Score = 53.9 bits (128), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 35/54 (64%)
Query: 60 LREAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDF 113
L+EAF + D+E G I DVLR I+ L L +E+ MI E D+DGSGT+D+
Sbjct: 9 LKEAFRVLDKEKKGVIKVDVLRWILKSLGDELTEDEIENMIAETDTDGSGTVDY 62
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 36/60 (60%)
Query: 116 LTRAFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTL 175
L AF D+EKKG I D++ I++ LG +++ + +I E D DGSG +++ EF L
Sbjct: 9 LKEAFRVLDKEKKGVIKVDVLRWILKSLGDELTEDEIENMIAETDTDGSGTVDYEEFKCL 68
Score = 28.9 bits (63), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 23/37 (62%)
Query: 5 IMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTL 41
I++ LG +++ + +I E D DGSG +++ EF L
Sbjct: 32 ILKSLGDELTEDEIENMIAETDTDGSGTVDYEEFKCL 68
>pdb|3O4Y|A Chain A, Crystal Structure Of Cad Domain Of The Plasmodium Vivax
Cdpk, Pvx_11610
Length = 196
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 68/138 (49%), Gaps = 29/138 (21%)
Query: 60 LREAFMLYDREGNGYITTDVLREIISE----LDPNLDYEELNEMIEEIDSDGSGTIDF-- 113
L+ AF+ D EG G IT LR+ + L PN D ++++IDSDGSG ID+
Sbjct: 57 LKAAFLHLDEEGKGNITKLQLRKGLERSGLMLPPNFDL-----LLDQIDSDGSGNIDYTE 111
Query: 114 -------------DVLTRAFEAFDQEKKGSIPTDMVGTIM---EMLGHPQSQEA--LNEI 155
++ AF FD + G I T + ++ G+ ++ + ++
Sbjct: 112 FLAAAIDRRQLSKKLIYCAFRVFDVDNDGEITTAELAHVLFNGNKRGNITERDVNQVKKM 171
Query: 156 IKEVDEDGSGELEFNEFC 173
I+EVD++G G+++F EF
Sbjct: 172 IREVDKNGDGKIDFYEFS 189
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 47/102 (46%), Gaps = 20/102 (19%)
Query: 21 IIKEVDEDGSGELEFNEFCTLXXXXXXXXXXXXXXXXXXLREAFMLYDREGNGYITTDVL 80
++ ++D DGSG +++ EF + AF ++D + +G ITT L
Sbjct: 95 LLDQIDSDGSGNIDYTEFLA-------AAIDRRQLSKKLIYCAFRVFDVDNDGEITTAEL 147
Query: 81 REI---------ISELDPNLDYEELNEMIEEIDSDGSGTIDF 113
+ I+E D N ++ +MI E+D +G G IDF
Sbjct: 148 AHVLFNGNKRGNITERDVN----QVKKMIREVDKNGDGKIDF 185
>pdb|2BL0|C Chain C, Physarum Polycephalum Myosin Ii Regulatory Domain
Length = 142
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 57/131 (43%), Gaps = 18/131 (13%)
Query: 60 LREAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDF------ 113
+EAF L+D E G+IT + L+ ++ + ++ NEM E D+ G+G I F
Sbjct: 8 FKEAFELFDSERTGFITKEGLQTVLKQFGVRVEPAAFNEMFNEADATGNGKIQFPEFLSM 67
Query: 114 -----------DVLTRAFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDED 162
D+L +AF FD E G IP + + LG E + + E
Sbjct: 68 MGRRMKQTTSEDILRQAFRTFDPEGTGYIPKAALQDALLNLGDRLKPHEFAEFLG-ITET 126
Query: 163 GSGELEFNEFC 173
G++ ++ F
Sbjct: 127 EKGQIRYDNFI 137
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 50/111 (45%), Gaps = 6/111 (5%)
Query: 4 TIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTLXXXXXXXXXXXXXXXXXXLREA 63
T+++ G A NE+ E D G+G+++F EF ++ LR+A
Sbjct: 30 TVLKQFGVRVEPAAFNEMFNEADATGNGKIQFPEFLSM-----MGRRMKQTTSEDILRQA 84
Query: 64 FMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDFD 114
F +D EG GYI L++ + L L E E + +++ G I +D
Sbjct: 85 FRTFDPEGTGYIPKAALQDALLNLGDRLKPHEFAEFLGITETE-KGQIRYD 134
Score = 43.9 bits (102), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 41/86 (47%), Gaps = 5/86 (5%)
Query: 119 AFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTLXXX 178
AFE FD E+ G I + + T+++ G A NE+ E D G+G+++F EF ++
Sbjct: 11 AFELFDSERTGFITKEGLQTVLKQFGVRVEPAAFNEMFNEADATGNGKIQFPEFLSM--- 67
Query: 179 XXXXXXXXXXXXXXXLREAFMLYDRE 204
LR+AF +D E
Sbjct: 68 --MGRRMKQTTSEDILRQAFRTFDPE 91
>pdb|3K21|A Chain A, Crystal Structure Of Carboxy-Terminus Of Pfc0420w
Length = 191
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 71/135 (52%), Gaps = 23/135 (17%)
Query: 60 LREAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDF------ 113
L+ F++ D +G GYIT + L++ + + L Y + ++++IDSDGSG ID+
Sbjct: 54 LKSTFLVLDEDGKGYITKEQLKKGLEKDGLKLPY-NFDLLLDQIDSDGSGKIDYTEFIAA 112
Query: 114 ---------DVLTRAFEAFDQEKKGSIPTDMVGTIMEMLGHPQ---SQEALNEI---IKE 158
++ AF FD + G I T + I+ G+ + +Q +N + I++
Sbjct: 113 ALDRKQLSKKLIYCAFRVFDVDNDGEITTAELAHILYN-GNKKGNITQRDVNRVKRMIRD 171
Query: 159 VDEDGSGELEFNEFC 173
VD++ G+++F+EF
Sbjct: 172 VDKNNDGKIDFHEFS 186
Score = 35.8 bits (81), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 43/98 (43%), Gaps = 12/98 (12%)
Query: 21 IIKEVDEDGSGELEFNEFCTLXXXXXXXXXXXXXXXXXXLREAFMLYDREGNGYITTDVL 80
++ ++D DGSG++++ EF + AF ++D + +G ITT L
Sbjct: 92 LLDQIDSDGSGKIDYTEFIA-------AALDRKQLSKKLIYCAFRVFDVDNDGEITTAEL 144
Query: 81 REIISELDPN-----LDYEELNEMIEEIDSDGSGTIDF 113
I+ + D + MI ++D + G IDF
Sbjct: 145 AHILYNGNKKGNITQRDVNRVKRMIRDVDKNNDGKIDF 182
Score = 26.6 bits (57), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 39/92 (42%), Gaps = 21/92 (22%)
Query: 83 IISELDPNLDYEELNEMIEEIDSDGSGTIDFDVLTRAFEAFDQEKKGSIPTDMVGTIMEM 142
II++ + D E+L +D DG G I + L + E +
Sbjct: 41 IIAQQSNDYDVEKLKSTFLVLDEDGKGYITKEQLKKGLEK------------------DG 82
Query: 143 LGHPQSQEALNEIIKEVDEDGSGELEFNEFCT 174
L P + + L + ++D DGSG++++ EF
Sbjct: 83 LKLPYNFDLL---LDQIDSDGSGKIDYTEFIA 111
>pdb|3FWB|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|E Chain E, Sac3:sus1:cdc31 Complex
pdb|3FWC|I Chain I, Sac3:sus1:cdc31 Complex
pdb|3FWC|M Chain M, Sac3:sus1:cdc31 Complex
Length = 161
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 62/133 (46%), Gaps = 20/133 (15%)
Query: 62 EAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDFD------- 114
EAF L+D +G++ L+ + L L E+ ++I+E DS+G + +D
Sbjct: 27 EAFSLFDMNNDGFLDYHELKVAMKALGFELPKREILDLIDEYDSEGRHLMKYDDFYIVMG 86
Query: 115 ----------VLTRAFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDEDGS 164
+ RAF+ FD + G I + + + LG + E L +I+E D DG
Sbjct: 87 EKILKRDPLDEIKRAFQLFDDDHTGKISIKNLRRVAKELGETLTDEELRAMIEEFDLDGD 146
Query: 165 GELEFNEF---CT 174
GE+ NEF CT
Sbjct: 147 GEINENEFIAICT 159
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 51/111 (45%), Gaps = 5/111 (4%)
Query: 2 VGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTLXXXXXXXXXXXXXXXXXXLR 61
+ M+ LG + + ++I E D +G +++++F + ++
Sbjct: 45 LKVAMKALGFELPKREILDLIDEYDSEGRHLMKYDDFYIVMGEKILKRDPLDE-----IK 99
Query: 62 EAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTID 112
AF L+D + G I+ LR + EL L EEL MIEE D DG G I+
Sbjct: 100 RAFQLFDDDHTGKISIKNLRRVAKELGETLTDEELRAMIEEFDLDGDGEIN 150
Score = 26.9 bits (58), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
Query: 5 IMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEF---CT 40
+ + LG + E L +I+E D DG GE+ NEF CT
Sbjct: 121 VAKELGETLTDEELRAMIEEFDLDGDGEINENEFIAICT 159
>pdb|2KZ2|A Chain A, Calmodulin, C-Terminal Domain, F92e Mutant
Length = 94
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 38/55 (69%)
Query: 60 LREAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDFD 114
+REAF + D++GNGYI+ LR +++ L L EE++EMI E D DG G ++++
Sbjct: 31 IREAFRVEDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 85
Score = 36.2 bits (82), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 32/60 (53%)
Query: 116 LTRAFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTL 175
+ AF D++ G I + +M LG + E ++E+I+E D DG G++ + EF +
Sbjct: 31 IREAFRVEDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 90
Score = 30.4 bits (67), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 23/37 (62%)
Query: 5 IMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTL 41
+M LG + E ++E+I+E D DG G++ + EF +
Sbjct: 54 VMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 90
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 58/109 (53%), Gaps = 6/109 (5%)
Query: 15 QEALNEIIKEVDEDGSGELEFNEFCTLXXXXXXXXXXXXXXXXXXLREAFMLYDREGNGY 74
++ ++ ++ +D DGSG +E++EF + AF ++D++G+G
Sbjct: 380 EDQIDSLMPLLDMDGSGSIEYSEFIA------SAIDRTILLSRERMERAFKMFDKDGSGK 433
Query: 75 ITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDFDVLTRAFEAF 123
I+T L ++ S+ D ++ EEL +IE++D++ G +DF+ + F
Sbjct: 434 ISTKELFKLFSQADSSIQMEELESIIEQVDNNKDGEVDFNEFVEMLQNF 482
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 48/95 (50%), Gaps = 16/95 (16%)
Query: 94 EELNEMIEEIDSDGSGTIDF----------------DVLTRAFEAFDQEKKGSIPTDMVG 137
++++ ++ +D DGSG+I++ + + RAF+ FD++ G I T +
Sbjct: 381 DQIDSLMPLLDMDGSGSIEYSEFIASAIDRTILLSRERMERAFKMFDKDGSGKISTKELF 440
Query: 138 TIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEF 172
+ E L II++VD + GE++FNEF
Sbjct: 441 KLFSQADSSIQMEELESIIEQVDNNKDGEVDFNEF 475
Score = 32.3 bits (72), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 41/89 (46%), Gaps = 26/89 (29%)
Query: 94 EELNEMIEEIDSDGSGTIDFDVLTRAFEAFDQEK----------KGSIPTDMVGTIMEML 143
++L E+ ++D++ G +D D L R + F + K +GS D + ++M +L
Sbjct: 331 KQLTEIFRKLDTNNDGMLDRDELVRGYHEFMRLKGVDSNSLIQNEGSTIEDQIDSLMPLL 390
Query: 144 GHPQSQEALNEIIKEVDEDGSGELEFNEF 172
D DGSG +E++EF
Sbjct: 391 ----------------DMDGSGSIEYSEF 403
>pdb|2RO9|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 C-Terminal Domain
Length = 69
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 40/63 (63%)
Query: 60 LREAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDFDVLTRA 119
L+EAF ++D++ NG+I+ LR +++ L L EE++EMI E D DG G I+++ +
Sbjct: 6 LKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKV 65
Query: 120 FEA 122
A
Sbjct: 66 MMA 68
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 34/60 (56%)
Query: 116 LTRAFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTL 175
L AF FD+++ G I + +M LG + E ++E+I+E D DG G++ + EF +
Sbjct: 6 LKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKV 65
Score = 30.8 bits (68), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 23/37 (62%)
Query: 5 IMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTL 41
+M LG + E ++E+I+E D DG G++ + EF +
Sbjct: 29 VMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKV 65
>pdb|1S6I|A Chain A, Ca2+-Regulatory Region (Cld) From Soybean
Calcium-Dependent Protein Kinase-Alpha (Cdpk) In The
Presence Of Ca2+ And The Junction Domain (Jd)
Length = 188
Score = 50.8 bits (120), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 65/132 (49%), Gaps = 18/132 (13%)
Query: 60 LREAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDF------ 113
L+E F + D + +G IT D L++ + + L E+ ++++ D D SGTID+
Sbjct: 12 LKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDYGEFIAA 71
Query: 114 ----------DVLTRAFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDEDG 163
+ L AF FD++ G I D + + G ++++IKE+D+D
Sbjct: 72 TVHLNKLEREENLVSAFSYFDKDGSGYITLDEIQQACKDFGLDDIH--IDDMIKEIDQDN 129
Query: 164 SGELEFNEFCTL 175
G++++ EF +
Sbjct: 130 DGQIDYGEFAAM 141
Score = 30.0 bits (66), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 25/121 (20%), Positives = 48/121 (39%), Gaps = 24/121 (19%)
Query: 6 MEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTLXXXXXXXXXXXXXXXXXXLREAFM 65
++ +G + + +++ D D SG +++ EF L AF
Sbjct: 36 LKRVGSELMESEIKDLMDAADIDKSGTIDYGEFIA------ATVHLNKLEREENLVSAFS 89
Query: 66 LYDREGNGYIT------------------TDVLREIISELDPNLDYEELNEMIEEIDSDG 107
+D++G+GYIT D+++EI + D +DY E M+ + +G
Sbjct: 90 YFDKDGSGYITLDEIQQACKDFGLDDIHIDDMIKEIDQDNDGQIDYGEFAAMMRKRKGNG 149
Query: 108 S 108
Sbjct: 150 G 150
Score = 28.5 bits (62), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 17/72 (23%), Positives = 33/72 (45%), Gaps = 24/72 (33%)
Query: 18 LNEIIKEVDEDGSGELEFNEFCTLXXXXXXXXXXXXXXXXXXLREAFMLYDREGNGYITT 77
++++IKE+D+D G++++ EF A M+ R+GNG I
Sbjct: 118 IDDMIKEIDQDNDGQIDYGEF------------------------AAMMRKRKGNGGIGR 153
Query: 78 DVLREIISELDP 89
+R+ ++ D
Sbjct: 154 RTMRKTLNLRDA 165
>pdb|2LAN|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 N-Domain With Rdc
pdb|2LAP|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain With Rdc
Length = 167
Score = 50.4 bits (119), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 62/138 (44%), Gaps = 22/138 (15%)
Query: 60 LREAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDFD----- 114
LREAF +D++ +GYI L + + EL E+ ++I+ + G +DFD
Sbjct: 27 LREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFDDFVEL 86
Query: 115 ----------------VLTRAFEAFDQEKKGSIPTDMVGTIM-EMLGHPQSQEALNEIIK 157
L AF FD G I T + M ++LGH + EII+
Sbjct: 87 MGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIR 146
Query: 158 EVDEDGSGELEFNEFCTL 175
+VD +G G ++F EF +
Sbjct: 147 DVDLNGDGRVDFEEFVRM 164
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 61/118 (51%), Gaps = 2/118 (1%)
Query: 2 VGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTLXXXXXXXXXXXXXXXXXXLR 61
+G M +G+ ++ L E+ ++++ + G ++F++F L LR
Sbjct: 47 LGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFDDFVELMGPKLLAETADMIGVKE-LR 105
Query: 62 EAFMLYDREGNGYITTDVLREIISEL-DPNLDYEELNEMIEEIDSDGSGTIDFDVLTR 118
+AF +D G+G I+T LRE + +L + + ++ E+I ++D +G G +DF+ R
Sbjct: 106 DAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEEFVR 163
>pdb|3OX5|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 50.4 bits (119), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 62/138 (44%), Gaps = 22/138 (15%)
Query: 60 LREAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDFD----- 114
LREAF +D++ +GYI L + + EL E+ ++I+ + G +DFD
Sbjct: 13 LREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFDDFVEL 72
Query: 115 ----------------VLTRAFEAFDQEKKGSIPTDMVGTIM-EMLGHPQSQEALNEIIK 157
L AF FD G I T + M ++LGH + EII+
Sbjct: 73 MGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIR 132
Query: 158 EVDEDGSGELEFNEFCTL 175
+VD +G G ++F EF +
Sbjct: 133 DVDLNGDGRVDFEEFVRM 150
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 61/118 (51%), Gaps = 2/118 (1%)
Query: 2 VGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTLXXXXXXXXXXXXXXXXXXLR 61
+G M +G+ ++ L E+ ++++ + G ++F++F L LR
Sbjct: 33 LGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFDDFVELMGPKLLAETADMIGVKE-LR 91
Query: 62 EAFMLYDREGNGYITTDVLREIISEL-DPNLDYEELNEMIEEIDSDGSGTIDFDVLTR 118
+AF +D G+G I+T LRE + +L + + ++ E+I ++D +G G +DF+ R
Sbjct: 92 DAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEEFVR 149
>pdb|2AMI|A Chain A, Solution Structure Of The Calcium-Loaded N-Terminal Sensor
Domain Of Centrin
Length = 96
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 35/55 (63%)
Query: 60 LREAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDFD 114
+REAF L+D +G+G I L+ + L EE+ +MI EID DGSGTIDF+
Sbjct: 32 IREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTIDFE 86
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 34/57 (59%)
Query: 119 AFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTL 175
AF+ FD + G+I + M LG +E + ++I E+D+DGSG ++F EF T+
Sbjct: 35 AFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTIDFEEFLTM 91
Score = 36.2 bits (82), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 24/36 (66%)
Query: 6 MEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTL 41
M LG +E + ++I E+D+DGSG ++F EF T+
Sbjct: 56 MRALGFEPKKEEIKKMISEIDKDGSGTIDFEEFLTM 91
>pdb|2KXW|A Chain A, Structure Of The C-Domain Fragment Of Apo Calmodulin Bound
To The Iq Motif Of Nav1.2
Length = 73
Score = 50.1 bits (118), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 38/59 (64%)
Query: 60 LREAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDFDVLTR 118
L EAF ++DR+GNG I+ LR +++ L L +E++EMI E D DG G I+++ R
Sbjct: 10 LIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYEEFVR 68
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 33/60 (55%)
Query: 116 LTRAFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTL 175
L AF+ FD++ G I + +M LG + + ++E+I+E D DG G + + EF +
Sbjct: 10 LIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYEEFVRM 69
Score = 28.9 bits (63), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 12/37 (32%), Positives = 22/37 (59%)
Query: 5 IMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTL 41
+M LG + + ++E+I+E D DG G + + EF +
Sbjct: 33 VMTNLGEKLTDDEVDEMIREADIDGDGHINYEEFVRM 69
>pdb|2KFX|T Chain T, Structure Of The N-Terminal Domain Of Human Cardiac
Troponin C Bound To Calcium Ion And To The Inhibitor W7
Length = 89
Score = 50.1 bits (118), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 32/47 (68%)
Query: 129 GSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTL 175
GSI T +G +M MLG + E L E+I EVDEDGSG ++F+EF +
Sbjct: 34 GSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVM 80
Score = 44.3 bits (103), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 28/40 (70%)
Query: 2 VGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTL 41
+G +M MLG + E L E+I EVDEDGSG ++F+EF +
Sbjct: 41 LGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVM 80
Score = 43.5 bits (101), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 30/43 (69%)
Query: 72 NGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDFD 114
+G I+T L +++ L N EEL EMI+E+D DGSGT+DFD
Sbjct: 33 DGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFD 75
>pdb|1R2U|A Chain A, Nmr Structure Of The N Domain Of Trout Cardiac Troponin C
At 30 C
pdb|1R6P|A Chain A, Nmr Structure Of The N-Terminal Domain Of Trout Cardiac
Troponin C At 7 C
Length = 89
Score = 50.1 bits (118), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 38/58 (65%), Gaps = 1/58 (1%)
Query: 119 AFEAFDQEKK-GSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTL 175
AF+ F Q+ + G I T +G +M MLG + E L E+I EVDEDGSG ++F+EF +
Sbjct: 23 AFDIFIQDAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVM 80
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 60 LREAFMLYDREG-NGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDFD 114
+ AF ++ ++ +G I+T L +++ L N EEL EMI+E+D DGSGT+DFD
Sbjct: 20 FKAAFDIFIQDAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFD 75
Score = 43.9 bits (102), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 28/40 (70%)
Query: 2 VGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTL 41
+G +M MLG + E L E+I EVDEDGSG ++F+EF +
Sbjct: 41 LGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVM 80
>pdb|2CTN|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 30
Structures
Length = 89
Score = 50.1 bits (118), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 32/47 (68%)
Query: 129 GSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTL 175
GSI T +G +M MLG + E L E+I EVDEDGSG ++F+EF +
Sbjct: 34 GSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVM 80
Score = 44.3 bits (103), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 28/40 (70%)
Query: 2 VGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTL 41
+G +M MLG + E L E+I EVDEDGSG ++F+EF +
Sbjct: 41 LGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVM 80
Score = 43.9 bits (102), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 30/43 (69%)
Query: 72 NGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDFD 114
+G I+T L +++ L N EEL EMI+E+D DGSGT+DFD
Sbjct: 33 DGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFD 75
>pdb|1WRK|A Chain A, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Orthrombic Crystal Form)
pdb|1WRK|B Chain B, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Orthrombic Crystal Form)
pdb|1WRL|A Chain A, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|B Chain B, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|C Chain C, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|D Chain D, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|E Chain E, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|F Chain F, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
Length = 88
Score = 50.1 bits (118), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 32/47 (68%)
Query: 129 GSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTL 175
GSI T +G +M MLG + E L E+I EVDEDGSG ++F+EF +
Sbjct: 34 GSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVM 80
Score = 44.3 bits (103), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 28/40 (70%)
Query: 2 VGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTL 41
+G +M MLG + E L E+I EVDEDGSG ++F+EF +
Sbjct: 41 LGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVM 80
Score = 43.5 bits (101), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 30/43 (69%)
Query: 72 NGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDFD 114
+G I+T L +++ L N EEL EMI+E+D DGSGT+DFD
Sbjct: 33 DGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFD 75
>pdb|4GJG|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C Mutant D2n/v28i/l29q/g30d (niqd) In
Complex With Cadmium
Length = 89
Score = 50.1 bits (118), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 38/58 (65%), Gaps = 1/58 (1%)
Query: 119 AFEAFDQEKK-GSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTL 175
AF+ F Q+ + G I T +G +M MLG + E L E+I EVDEDGSG ++F+EF +
Sbjct: 23 AFDIFIQDAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVM 80
Score = 44.3 bits (103), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 60 LREAFMLYDREG-NGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDFD 114
+ AF ++ ++ +G I+T L +++ L N EEL EMI+E+D DGSGT+DFD
Sbjct: 20 FKAAFDIFIQDAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFD 75
Score = 43.9 bits (102), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 28/40 (70%)
Query: 2 VGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTL 41
+G +M MLG + E L E+I EVDEDGSG ++F+EF +
Sbjct: 41 LGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVM 80
>pdb|3OX6|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 50.1 bits (118), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 61/138 (44%), Gaps = 22/138 (15%)
Query: 60 LREAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDFD----- 114
LREAF +D++ +GYI L + + EL E+ ++I+ + G +DFD
Sbjct: 13 LREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFDDFVEL 72
Query: 115 ----------------VLTRAFEAFDQEKKGSIPTDMVGTIME-MLGHPQSQEALNEIIK 157
L AF FD G I T + M +LGH + EII+
Sbjct: 73 MGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRALLGHQVGHRDIEEIIR 132
Query: 158 EVDEDGSGELEFNEFCTL 175
+VD +G G ++F EF +
Sbjct: 133 DVDLNGDGRVDFEEFVRM 150
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 60/118 (50%), Gaps = 2/118 (1%)
Query: 2 VGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTLXXXXXXXXXXXXXXXXXXLR 61
+G M +G+ ++ L E+ ++++ + G ++F++F L LR
Sbjct: 33 LGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFDDFVELMGPKLLAETADMIGVKE-LR 91
Query: 62 EAFMLYDREGNGYITTDVLREIISEL-DPNLDYEELNEMIEEIDSDGSGTIDFDVLTR 118
+AF +D G+G I+T LRE + L + + ++ E+I ++D +G G +DF+ R
Sbjct: 92 DAFREFDTNGDGEISTSELREAMRALLGHQVGHRDIEEIIRDVDLNGDGRVDFEEFVR 149
>pdb|2AAO|A Chain A, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
pdb|2AAO|B Chain B, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
Length = 166
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 61/131 (46%), Gaps = 18/131 (13%)
Query: 60 LREAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDF------ 113
L+E F D + +G IT + L+ + + NL E+ ++ + D D SGTID+
Sbjct: 29 LKEXFNXIDADKSGQITFEELKAGLKRVGANLKESEILDLXQAADVDNSGTIDYKEFIAA 88
Query: 114 ----------DVLTRAFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDEDG 163
D L AF FD++ G I D + E G + + E+ ++VD+D
Sbjct: 89 TLHLNKIEREDHLFAAFTYFDKDGSGYITPDELQQACEEFGVEDVR--IEELXRDVDQDN 146
Query: 164 SGELEFNEFCT 174
G +++NEF
Sbjct: 147 DGRIDYNEFVA 157
>pdb|2GV5|A Chain A, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|B Chain B, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|D Chain D, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|E Chain E, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|A Chain A, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|B Chain B, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|C Chain C, Crystal Structure Of Sfi1pCDC31P COMPLEX
Length = 161
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 59/133 (44%), Gaps = 20/133 (15%)
Query: 62 EAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDFD------- 114
EAF L+D +G++ L+ L L E+ ++I+E DS+G +D
Sbjct: 27 EAFSLFDXNNDGFLDYHELKVAXKALGFELPKREILDLIDEYDSEGRHLXKYDDFYIVXG 86
Query: 115 ----------VLTRAFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDEDGS 164
+ RAF+ FD + G I + + + LG + E L I+E D DG
Sbjct: 87 EKILKRDPLDEIKRAFQLFDDDHTGKISIKNLRRVAKELGETLTDEELRAXIEEFDLDGD 146
Query: 165 GELEFNEF---CT 174
GE+ NEF CT
Sbjct: 147 GEINENEFIAICT 159
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 29/53 (54%)
Query: 60 LREAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTID 112
++ AF L+D + G I+ LR + EL L EEL IEE D DG G I+
Sbjct: 98 IKRAFQLFDDDHTGKISIKNLRRVAKELGETLTDEELRAXIEEFDLDGDGEIN 150
>pdb|2HF5|A Chain A, The Structure And Function Of A Novel Two-Site Calcium-
Binding Fragment Of Calmodulin
Length = 68
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 5/70 (7%)
Query: 18 LNEIIKEVDEDGSGELEFNEFCTLXXXXXXXXXXXXXXXXXXLREAFMLYDREGNGYITT 77
L ++I EVD DG+G ++F EF T+ +REAF ++D++GNGYI+
Sbjct: 3 LQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEE-----IREAFRVFDKDGNGYISA 57
Query: 78 DVLREIISEL 87
LR +++ L
Sbjct: 58 AELRHVMTNL 67
Score = 34.7 bits (78), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 17/67 (25%)
Query: 95 ELNEMIEEIDSDGSGTIDF-----------------DVLTRAFEAFDQEKKGSIPTDMVG 137
EL +MI E+D+DG+GTIDF + + AF FD++ G I +
Sbjct: 2 ELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELR 61
Query: 138 TIMEMLG 144
+M LG
Sbjct: 62 HVMTNLG 68
Score = 31.6 bits (70), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 5/53 (9%)
Query: 152 LNEIIKEVDEDGSGELEFNEFCTLXXXXXXXXXXXXXXXXXXLREAFMLYDRE 204
L ++I EVD DG+G ++F EF T+ +REAF ++D++
Sbjct: 3 LQDMINEVDADGNGTIDFPEFLTM-----MARKMKDTDSEEEIREAFRVFDKD 50
>pdb|2LHH|A Chain A, Solution Structure Of Ca2+-Bound Ycam
Length = 128
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 45/85 (52%), Gaps = 5/85 (5%)
Query: 119 AFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTLXXX 178
AF FD++ GSI + + T+M LG S+ +N+++ E+D DG+ ++EF+EF L
Sbjct: 15 AFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLAL--- 71
Query: 179 XXXXXXXXXXXXXXXLREAFMLYDR 203
L EAF ++D+
Sbjct: 72 --MSRQLKSNDSEQELLEAFKVFDK 94
Score = 47.8 bits (112), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 49/95 (51%), Gaps = 5/95 (5%)
Query: 2 VGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTLXXXXXXXXXXXXXXXXXXLR 61
+ T+M LG S+ +N+++ E+D DG+ ++EF+EF L L
Sbjct: 32 LATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLAL-----MSRQLKSNDSEQELL 86
Query: 62 EAFMLYDREGNGYITTDVLREIISELDPNLDYEEL 96
EAF ++D+ G+G I+ L+ +++ + L EL
Sbjct: 87 EAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEL 121
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 51/102 (50%), Gaps = 17/102 (16%)
Query: 60 LREAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDFD----V 115
+EAF L+D++ NG I++ L ++ L + E+N+++ EID DG+ I+F +
Sbjct: 12 FKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLAL 71
Query: 116 LTR-------------AFEAFDQEKKGSIPTDMVGTIMEMLG 144
++R AF+ FD+ G I + ++ +G
Sbjct: 72 MSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIG 113
>pdb|2ROB|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 C-Terminal Domain
Length = 70
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 38/59 (64%)
Query: 60 LREAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDFDVLTR 118
L+EAF ++D++ NGYI+ LR ++ L L EE+ +MI+E D DG G ++++ +
Sbjct: 6 LKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEFVK 64
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 34/60 (56%)
Query: 116 LTRAFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTL 175
L AF+ FD+++ G I + +M LG + E + ++IKE D DG G++ + EF +
Sbjct: 6 LKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEFVKM 65
Score = 28.9 bits (63), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 22/37 (59%)
Query: 5 IMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTL 41
+M LG + E + ++IKE D DG G++ + EF +
Sbjct: 29 VMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEFVKM 65
>pdb|1F54|A Chain A, Solution Structure Of The Apo N-Terminal Domain Of Yeast
Calmodulin
pdb|1F55|A Chain A, Solution Structure Of The Calcium Bound N-Terminal Domain
Of Yeast Calmodulin
Length = 77
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 37/57 (64%)
Query: 119 AFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTL 175
AF FD++ GSI + + T+M LG S+ +N+++ E+D DG+ ++EF+EF L
Sbjct: 15 AFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLAL 71
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 34/54 (62%)
Query: 60 LREAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDF 113
+EAF L+D++ NG I++ L ++ L + E+N+++ EID DG+ I+F
Sbjct: 12 FKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEF 65
Score = 35.8 bits (81), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 27/40 (67%)
Query: 2 VGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTL 41
+ T+M LG S+ +N+++ E+D DG+ ++EF+EF L
Sbjct: 32 LATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLAL 71
>pdb|2KN2|A Chain A, Solution Structure Of The C-Terminal Domain Of Soybean
Calmodulin Isoform 4 Fused With The Calmodulin-Binding
Domain Of Ntmkp1
Length = 92
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 37/55 (67%)
Query: 60 LREAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDFD 114
L+EAF ++D++ NGYI+ LR ++ L L EE+ +MI+E D DG G ++++
Sbjct: 11 LKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYE 65
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Query: 109 GTIDFDV---LTRAFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDEDGSG 165
G +D D L AF+ FD+++ G I + +M LG + E + ++IKE D DG G
Sbjct: 1 GHMDTDAEEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDG 60
Query: 166 ELEFNEFCTL 175
++ + EF +
Sbjct: 61 QVNYEEFVKM 70
Score = 28.9 bits (63), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 22/37 (59%)
Query: 5 IMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTL 41
+M LG + E + ++IKE D DG G++ + EF +
Sbjct: 34 VMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEFVKM 70
>pdb|4GJF|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C Mutant L29q In Complex With Cadmium
Length = 89
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Query: 119 AFEAFDQ-EKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTL 175
AF+ F Q + G I T +G +M MLG + E L E+I EVDEDGSG ++F+EF +
Sbjct: 23 AFDIFVQGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVM 80
Score = 43.9 bits (102), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 30/43 (69%)
Query: 72 NGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDFD 114
+G I+T L +++ L N EEL EMI+E+D DGSGT+DFD
Sbjct: 33 DGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFD 75
Score = 43.5 bits (101), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 28/40 (70%)
Query: 2 VGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTL 41
+G +M MLG + E L E+I EVDEDGSG ++F+EF +
Sbjct: 41 LGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVM 80
>pdb|3I5G|B Chain B, Crystal Structure Of Rigor-Like Squid Myosin S1
pdb|3I5H|B Chain B, The Crystal Structure Of Rigor Like Squid Myosin S1 In The
Absence Of Nucleotide
pdb|3I5I|B Chain B, The Crystal Structure Of Squid Myosin S1 In The Presence
Of So4 2-
pdb|3I5F|B Chain B, Crystal Structure Of Squid Mg.Adp Myosin S1
Length = 153
Score = 48.1 bits (113), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 57/113 (50%), Gaps = 13/113 (11%)
Query: 60 LREAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDS-------------D 106
L+EAF + D++ +G+I + L+++ S L +ELN M++E
Sbjct: 18 LKEAFTMIDQDRDGFIGMEDLKDMFSSLGRVPPDDELNAMLKECPGQLNFTAFLTLFGEK 77
Query: 107 GSGTIDFDVLTRAFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEV 159
SGT D L AF FD++ +G IP D + ++E +G S+E + + K+
Sbjct: 78 VSGTDPEDALRNAFSMFDEDGQGFIPEDYLKDLLENMGDNFSKEEIKNVWKDA 130
>pdb|1MXL|C Chain C, Structure Of Cardiac Troponin C-troponin I Complex
pdb|1LXF|C Chain C, Structure Of The Regulatory N-Domain Of Human Cardiac
Troponin C In Complex With Human Cardiac Troponin-I(147-
163) And Bepridil
pdb|1AP4|A Chain A, Regulatory Domain Of Human Cardiac Troponin C In The
Calcium-Saturated State, Nmr, 40 Structures
pdb|1SPY|A Chain A, Regulatory Domain Of Human Cardiac Troponin C In The
Calcium-Free State, Nmr, 40 Structures
pdb|2KRD|C Chain C, Solution Structure Of The Regulatory Domain Of Human
Cardiac C In Complex With The Switch Region Of Cardiac
Troponin I A
pdb|2L1R|A Chain A, The Structure Of The Calcium-Sensitizer, Dfbp-O, In
Complex With The N-Domain Of Troponin C And The Switch
Region Of Troponin I
pdb|3SD6|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C In Complex With Cadmium At 1.4
Resolution.
pdb|3SWB|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C In Complex With Cadmium At 1.7 A
Resolution
pdb|4GJE|A Chain A, Crystal Structure Of The Refolded Amino-terminal Domain Of
Human Cardiac Troponin C In Complex With Cadmium
Length = 89
Score = 47.8 bits (112), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 31/47 (65%)
Query: 129 GSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTL 175
G I T +G +M MLG + E L E+I EVDEDGSG ++F+EF +
Sbjct: 34 GCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVM 80
Score = 43.9 bits (102), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 30/43 (69%)
Query: 72 NGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDFD 114
+G I+T L +++ L N EEL EMI+E+D DGSGT+DFD
Sbjct: 33 DGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFD 75
Score = 43.5 bits (101), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 28/40 (70%)
Query: 2 VGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTL 41
+G +M MLG + E L E+I EVDEDGSG ++F+EF +
Sbjct: 41 LGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVM 80
>pdb|2B1U|A Chain A, Solution Structure Of Calmodulin-Like Skin Protein C
Terminal Domain
Length = 71
Score = 47.0 bits (110), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 32/60 (53%)
Query: 116 LTRAFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTL 175
L AF AFDQ+ G I D + M LG P QE L+ +I+E D D G + + EF +
Sbjct: 8 LQVAFRAFDQDGDGHITVDELRRAMAGLGQPLPQEELDAMIREADVDQDGRVNYEEFARM 67
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 36/59 (61%)
Query: 60 LREAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDFDVLTR 118
L+ AF +D++G+G+IT D LR ++ L L EEL+ MI E D D G ++++ R
Sbjct: 8 LQVAFRAFDQDGDGHITVDELRRAMAGLGQPLPQEELDAMIREADVDQDGRVNYEEFAR 66
Score = 31.6 bits (70), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 20/36 (55%)
Query: 6 MEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTL 41
M LG P QE L+ +I+E D D G + + EF +
Sbjct: 32 MAGLGQPLPQEELDAMIREADVDQDGRVNYEEFARM 67
>pdb|2KGB|C Chain C, Nmr Solution Of The Regulatory Domain Cardiac
F77w-Troponin C In Complex With The Cardiac Troponin I
144-163 Switch Peptide
Length = 89
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 31/47 (65%)
Query: 129 GSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTL 175
G I T +G +M MLG + E L E+I EVDEDGSG ++F+E+ +
Sbjct: 34 GCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEWLVM 80
Score = 43.9 bits (102), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 30/43 (69%)
Query: 72 NGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDFD 114
+G I+T L +++ L N EEL EMI+E+D DGSGT+DFD
Sbjct: 33 DGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFD 75
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 28/40 (70%)
Query: 2 VGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTL 41
+G +M MLG + E L E+I EVDEDGSG ++F+E+ +
Sbjct: 41 LGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEWLVM 80
>pdb|2JXL|A Chain A, Solution Structure Of Cardiac N-Domain Troponin C Mutant
F77w-V82a
Length = 89
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 31/47 (65%)
Query: 129 GSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTL 175
G I T +G +M MLG + E L E+I EVDEDGSG ++F+E+ +
Sbjct: 34 GCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEWLVM 80
Score = 43.9 bits (102), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 30/43 (69%)
Query: 72 NGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDFD 114
+G I+T L +++ L N EEL EMI+E+D DGSGT+DFD
Sbjct: 33 DGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFD 75
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 28/40 (70%)
Query: 2 VGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTL 41
+G +M MLG + E L E+I EVDEDGSG ++F+E+ +
Sbjct: 41 LGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEWLVM 80
>pdb|2GGM|A Chain A, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
pdb|2GGM|B Chain B, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
Length = 172
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 62/133 (46%), Gaps = 17/133 (12%)
Query: 60 LREAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDF-DVLT- 117
+REAF L+D +G G I L+ L EE+ + I EID +G+G +F D LT
Sbjct: 33 IREAFDLFDADGTGTIDVKELKVAXRALGFEPKKEEIKKXISEIDKEGTGKXNFGDFLTV 92
Query: 118 ---------------RAFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDED 162
+AF+ FD ++ G I + + + LG + E L E I E D D
Sbjct: 93 XTQKXSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEXIDEADRD 152
Query: 163 GSGELEFNEFCTL 175
G GE+ EF +
Sbjct: 153 GDGEVSEQEFLRI 165
Score = 43.5 bits (101), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 44/86 (51%), Gaps = 5/86 (5%)
Query: 26 DEDGSGELEFNEFCTLXXXXXXXXXXXXXXXXXXLREAFMLYDREGNGYITTDVLREIIS 85
D++G+G+ F +F T+ + +AF L+D + G I+ L+ +
Sbjct: 77 DKEGTGKXNFGDFLTVXTQKXSEKDTKEE-----ILKAFKLFDDDETGKISFKNLKRVAK 131
Query: 86 ELDPNLDYEELNEMIEEIDSDGSGTI 111
EL NL EEL E I+E D DG G +
Sbjct: 132 ELGENLTDEELQEXIDEADRDGDGEV 157
>pdb|2LV7|A Chain A, Solution Structure Of Ca2+-Bound Cabp7 N-Terminal Doman
Length = 100
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 35/57 (61%)
Query: 119 AFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTL 175
AF+ FD++ G I +GT M LG+ ++ L II+ +D DG G+++F EF TL
Sbjct: 41 AFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMDGDGQVDFEEFVTL 97
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 34/55 (61%)
Query: 60 LREAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDFD 114
+REAF ++DR+GNG+I+ L + L + EL +I+ +D DG G +DF+
Sbjct: 38 IREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMDGDGQVDFE 92
Score = 35.0 bits (79), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 26/40 (65%)
Query: 2 VGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTL 41
+GT M LG+ ++ L II+ +D DG G+++F EF TL
Sbjct: 58 LGTAMRSLGYMPNEVELEVIIQRLDMDGDGQVDFEEFVTL 97
>pdb|1M8Q|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|T Chain T, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
Length = 145
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 58/132 (43%), Gaps = 22/132 (16%)
Query: 60 LREAFMLYDREGNGYITTDVLREIISELDP-NLDYEELNEMIEEIDSDGSGTIDF----- 113
+EAF + D+ +G I D LRE + + N+ EEL+ MI+E SG I+F
Sbjct: 9 FKEAFTVIDQNADGIIDKDDLRETFAAMGRLNVKNEELDAMIKE----ASGPINFTVFLT 64
Query: 114 ------------DVLTRAFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDE 161
DV+ AF+ D + KGSI + ++ G + E + +
Sbjct: 65 MFGEKLKGADPEDVIMGAFKVLDPDGKGSIKKSFLEELLTTGGGRFTPEEIKNMWAAFPP 124
Query: 162 DGSGELEFNEFC 173
D +G +++ C
Sbjct: 125 DVAGNVDYKNIC 136
>pdb|2MYS|B Chain B, Myosin Subfragment-1, Alpha Carbon Coordinates Only For
The Two Light Chains
pdb|1I84|U Chain U, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment.
pdb|1I84|Z Chain Z, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment
Length = 166
Score = 44.3 bits (103), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 58/132 (43%), Gaps = 22/132 (16%)
Query: 60 LREAFMLYDREGNGYITTDVLREIISELDP-NLDYEELNEMIEEIDSDGSGTIDF----- 113
+EAF + D+ +G I D LRE + + N+ EEL+ MI+E SG I+F
Sbjct: 27 FKEAFTVIDQNADGIIDKDDLRETFAAMGRLNVKNEELDAMIKE----ASGPINFTVFLT 82
Query: 114 ------------DVLTRAFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDE 161
DV+ AF+ D + KGSI + ++ G + E + +
Sbjct: 83 MFGEKLKGADPEDVIMGAFKVLDPDGKGSIKKSFLEELLTTGGGRFTPEEIKNMWAAFPP 142
Query: 162 DGSGELEFNEFC 173
D +G +++ C
Sbjct: 143 DVAGNVDYKNIC 154
>pdb|3J04|B Chain B, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
pdb|3J04|E Chain E, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
Length = 143
Score = 43.9 bits (102), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 61/133 (45%), Gaps = 21/133 (15%)
Query: 60 LREAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDF------ 113
+EAF + D+ +G+I + L ++++ + N +E +E + S+ G I+F
Sbjct: 9 FKEAFNMIDQNRDGFIDKEDLHDMLASMGKN----PTDEYLEGMMSEAPGPINFTMFLTM 64
Query: 114 -----------DVLTRAFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDED 162
DV+ AF FD+E G I D + ++ +G + E ++E+ +E D
Sbjct: 65 FGEKLNGTDPEDVIRNAFACFDEEASGFIHEDHLRELLTTMGDRFTDEEVDEMYREAPID 124
Query: 163 GSGELEFNEFCTL 175
G + EF +
Sbjct: 125 KKGNFNYVEFTRI 137
>pdb|2LC5|A Chain A, Calmodulin-Like Protein From Entamoeba Histolytica:
Solution Structure And Calcium-Binding Properties Of A
Partially Folded Protein
Length = 85
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 36/57 (63%)
Query: 119 AFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTL 175
AF+ FD++ + + +GT+M LG +++ ++EI+K+ D+D SG+ + F T+
Sbjct: 19 AFQLFDKDNDNKLTAEELGTVMRALGANPTKQKISEIVKDYDKDNSGKFDQETFLTI 75
Score = 36.2 bits (82), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 32/52 (61%)
Query: 61 REAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTID 112
+EAF L+D++ + +T + L ++ L N ++++E++++ D D SG D
Sbjct: 17 KEAFQLFDKDNDNKLTAEELGTVMRALGANPTKQKISEIVKDYDKDNSGKFD 68
Score = 35.4 bits (80), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 27/40 (67%)
Query: 2 VGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTL 41
+GT+M LG +++ ++EI+K+ D+D SG+ + F T+
Sbjct: 36 LGTVMRALGANPTKQKISEIVKDYDKDNSGKFDQETFLTI 75
>pdb|1ZMZ|A Chain A, Solution Structure Of The N-Terminal Domain (M1-S98) Of
Human Centrin 2
Length = 98
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 60 LREAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDF-DVLT 117
+REAF L+D +G G I L+ + L EE+ +MI EID +G+G ++F D LT
Sbjct: 33 IREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNFGDFLT 91
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 34/57 (59%)
Query: 119 AFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTL 175
AF+ FD + G+I + M LG +E + ++I E+D++G+G++ F +F T+
Sbjct: 36 AFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNFGDFLTV 92
Score = 32.0 bits (71), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 24/36 (66%)
Query: 6 MEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTL 41
M LG +E + ++I E+D++G+G++ F +F T+
Sbjct: 57 MRALGFEPKKEEIKKMISEIDKEGTGKMNFGDFLTV 92
>pdb|2A4J|A Chain A, Solution Structure Of The C-Terminal Domain (T94-Y172) Of
The Human Centrin 2 In Complex With A 17 Residues
Peptide (P1-Xpc) From Xeroderma Pigmentosum Group C
Protein
pdb|2K2I|A Chain A, Nmr Solution Structure Of The C-Terminal Domain (T94-Y172)
Of The Human Centrin 2 In Complex With A Repeat Sequence
Of Human Sfi1 (R641-T660)
Length = 79
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 30/50 (60%)
Query: 62 EAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTI 111
+AF L+D + G I+ L+ + EL NL EEL EMI+E D DG G +
Sbjct: 15 KAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEV 64
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 31/58 (53%)
Query: 118 RAFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTL 175
+AF+ FD ++ G I + + + LG + E L E+I E D DG GE+ EF +
Sbjct: 15 KAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQEFLRI 72
Score = 27.3 bits (59), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 20/37 (54%)
Query: 5 IMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTL 41
+ + LG + E L E+I E D DG GE+ EF +
Sbjct: 36 VAKELGENLTDEELQEMIDEADRDGDGEVSEQEFLRI 72
>pdb|3RV5|A Chain A, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
pdb|3RV5|B Chain B, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
pdb|3RV5|C Chain C, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
pdb|3RV5|D Chain D, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
Length = 89
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 27/44 (61%)
Query: 129 GSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEF 172
G I T +G + LG + E L E I EVDEDGSG ++F+EF
Sbjct: 34 GCISTKELGKVXRXLGQNPTPEELQEXIDEVDEDGSGTVDFDEF 77
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 28/43 (65%)
Query: 72 NGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDFD 114
+G I+T L ++ L N EEL E I+E+D DGSGT+DFD
Sbjct: 33 DGCISTKELGKVXRXLGQNPTPEELQEXIDEVDEDGSGTVDFD 75
Score = 37.7 bits (86), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 24/37 (64%)
Query: 2 VGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEF 38
+G + LG + E L E I EVDEDGSG ++F+EF
Sbjct: 41 LGKVXRXLGQNPTPEELQEXIDEVDEDGSGTVDFDEF 77
>pdb|1M46|A Chain A, Crystal Structure Of Mlc1p Bound To Iq4 Of Myo2p, A Class
V Myosin
pdb|1M45|A Chain A, Crystal Structure Of Mlc1p Bound To Iq2 Of Myo2p, A Class
V Myosin
pdb|1N2D|A Chain A, Ternary Complex Of Mlc1p Bound To Iq2 And Iq3 Of Myo2p, A
Class V Myosin
pdb|1N2D|B Chain B, Ternary Complex Of Mlc1p Bound To Iq2 And Iq3 Of Myo2p, A
Class V Myosin
Length = 148
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/140 (21%), Positives = 62/140 (44%), Gaps = 31/140 (22%)
Query: 61 REAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDFDVLT--- 117
++ F L+D++G G I D L + + + Y N+++++I + S D LT
Sbjct: 7 KDIFTLFDKKGQGAIAKDSLGDYLRAIG----YNPTNQLVQDIINADSSLRDASSLTLDQ 62
Query: 118 ------------------------RAFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALN 153
+AF+ FD+E G + + ++ LG + ++
Sbjct: 63 ITGLIEVNEKELDATTKAKTEDFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVD 122
Query: 154 EIIKEVDEDGSGELEFNEFC 173
E++K V+ D +GE+++ +F
Sbjct: 123 ELLKGVEVDSNGEIDYKKFI 142
>pdb|1MF8|B Chain B, Crystal Structure Of Human Calcineurin Complexed With
Cyclosporin A And Human Cyclophilin
Length = 170
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 70/177 (39%), Gaps = 36/177 (20%)
Query: 6 MEMLGHPQSQE--ALNEIIKEVDEDGSGELEFNEFCTLXXXXXXXXXXXXXXXXXXLREA 63
+EM H + E L + K++D D SG L EF +L ++
Sbjct: 9 LEMCSHFDADEIKRLGKRFKKLDLDNSGSLSVEEFMSLPELQQNPL----------VQRV 58
Query: 64 FMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDFDVLTRAFEAF 123
++D +GNG + E +S+ D E+ L AF +
Sbjct: 59 IDIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQ-------------------KLRFAFRIY 99
Query: 124 DQEKKGSIPTDMVGTIMEM-----LGHPQSQEALNEIIKEVDEDGSGELEFNEFCTL 175
D +K G I + +++M L Q Q+ +++ I D+DG G + F EFC +
Sbjct: 100 DMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINADKDGDGRISFEEFCAV 156
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 59/132 (44%), Gaps = 12/132 (9%)
Query: 4 TIMEMLGHPQSQEA--LNEIIKEVDEDGSGELEFNEFCTLXXXXXXXXXXXXXXXXXXLR 61
++ E + P+ Q+ + +I D DG+GE++F EF LR
Sbjct: 39 SVEEFMSLPELQQNPLVQRVIDIFDTDGNGEVDFKEFI-----EGVSQFSVKGDKEQKLR 93
Query: 62 EAFMLYDREGNGYITTDVLREIISEL-DPNLDYEELNEMIEEI----DSDGSGTIDFDVL 116
AF +YD + +GYI+ L +++ + NL +L +++++ D DG G I F+
Sbjct: 94 FAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINADKDGDGRISFEEF 153
Query: 117 TRAFEAFDQEKK 128
D KK
Sbjct: 154 CAVVGGLDIHKK 165
>pdb|1TCO|B Chain B, Ternary Complex Of A Calcineurin A Fragment, Calcineurin
B, Fkbp12 And The Immunosuppressant Drug Fk506
(tacrolimus)
pdb|1AUI|B Chain B, Human Calcineurin Heterodimer
pdb|1M63|B Chain B, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
pdb|1M63|F Chain F, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
Length = 169
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 70/177 (39%), Gaps = 36/177 (20%)
Query: 6 MEMLGHPQSQE--ALNEIIKEVDEDGSGELEFNEFCTLXXXXXXXXXXXXXXXXXXLREA 63
+EM H + E L + K++D D SG L EF +L ++
Sbjct: 8 LEMCSHFDADEIKRLGKRFKKLDLDNSGSLSVEEFMSLPELQQNPL----------VQRV 57
Query: 64 FMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDFDVLTRAFEAF 123
++D +GNG + E +S+ D E+ L AF +
Sbjct: 58 IDIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQ-------------------KLRFAFRIY 98
Query: 124 DQEKKGSIPTDMVGTIMEM-----LGHPQSQEALNEIIKEVDEDGSGELEFNEFCTL 175
D +K G I + +++M L Q Q+ +++ I D+DG G + F EFC +
Sbjct: 99 DMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINADKDGDGRISFEEFCAV 155
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 59/132 (44%), Gaps = 12/132 (9%)
Query: 4 TIMEMLGHPQSQEA--LNEIIKEVDEDGSGELEFNEFCTLXXXXXXXXXXXXXXXXXXLR 61
++ E + P+ Q+ + +I D DG+GE++F EF LR
Sbjct: 38 SVEEFMSLPELQQNPLVQRVIDIFDTDGNGEVDFKEFI-----EGVSQFSVKGDKEQKLR 92
Query: 62 EAFMLYDREGNGYITTDVLREIISEL-DPNLDYEELNEMIEEI----DSDGSGTIDFDVL 116
AF +YD + +GYI+ L +++ + NL +L +++++ D DG G I F+
Sbjct: 93 FAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINADKDGDGRISFEEF 152
Query: 117 TRAFEAFDQEKK 128
D KK
Sbjct: 153 CAVVGGLDIHKK 164
>pdb|1M39|A Chain A, Solution Structure Of The C-Terminal Fragment (F86-I165)
Of The Human Centrin 2 In Calcium Saturated Form
Length = 89
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 30/50 (60%)
Query: 62 EAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTI 111
+AF L+D + G I+ L+ + EL NL EEL EMI+E D DG G +
Sbjct: 25 KAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEV 74
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 31/58 (53%)
Query: 118 RAFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTL 175
+AF+ FD ++ G I + + + LG + E L E+I E D DG GE+ EF +
Sbjct: 25 KAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQEFLRI 82
Score = 27.3 bits (59), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 18/33 (54%)
Query: 9 LGHPQSQEALNEIIKEVDEDGSGELEFNEFCTL 41
LG + E L E+I E D DG GE+ EF +
Sbjct: 50 LGENLTDEELQEMIDEADRDGDGEVSEQEFLRI 82
>pdb|1OQP|A Chain A, Structure Of The Ca2+C-Terminal Domain Of Caltractin In
Complex With The Cdc31p-Binding Domain From Kar1p
Length = 77
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 31/57 (54%)
Query: 62 EAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDFDVLTR 118
+AF L+D + +G IT LR + EL NL EEL EMI E D + ID D R
Sbjct: 13 KAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDNEIDEDEFIR 69
Score = 33.9 bits (76), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Query: 107 GSGTID-FDVLTRAFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDEDGSG 165
GSG D + + +AF FD + G+I + + + LG ++E L E+I E D +
Sbjct: 1 GSGERDSREEILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDN 60
Query: 166 ELEFNEFCTL 175
E++ +EF +
Sbjct: 61 EIDEDEFIRI 70
>pdb|2W4A|B Chain B, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4G|B Chain B, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
pdb|2W4H|B Chain B, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
Length = 150
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 57/132 (43%), Gaps = 22/132 (16%)
Query: 60 LREAFMLYDREGNGYITTDVLREIISELDP-NLDYEELNEMIEEIDSDGSGTIDF----- 113
+EAF + D+ +G I D LRE + + N+ EEL+ MI+E SG I+F
Sbjct: 14 FKEAFTVIDQNRDGIIDKDDLRETFAAMGRLNVKNEELDAMIKE----ASGPINFTVFLT 69
Query: 114 ------------DVLTRAFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDE 161
DV+ AF+ D + KGSI + ++ + E + +
Sbjct: 70 MFGEKLKGADPEDVIMGAFKVLDPDGKGSIKKSFLEELLTTQCDRFTPEEIKNMWAAFPP 129
Query: 162 DGSGELEFNEFC 173
D +G +++ C
Sbjct: 130 DVAGNVDYKNIC 141
>pdb|2K7C|A Chain A, Nmr Structure Of Mg2+-Bound Cabp1 C-Domain
pdb|2K7D|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain
Length = 72
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 60 LREAFMLYDREGNGYITTDVLREIISE-LDPNLDYEELNEMIEEIDSDGSGTIDFDVLTR 118
LR+AF +D G+G I+T LRE + + L + + ++ E+I ++D +G G +DF+ R
Sbjct: 9 LRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEEFVR 68
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 116 LTRAFEAFDQEKKGSIPTDMVGTIM-EMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCT 174
L AF FD G I T + M ++LGH + EII++VD +G G ++F EF
Sbjct: 9 LRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEEFVR 68
Query: 175 L 175
+
Sbjct: 69 M 69
Score = 33.1 bits (74), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 23/38 (60%)
Query: 4 TIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTL 41
+ ++LGH + EII++VD +G G ++F EF +
Sbjct: 32 AMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEEFVRM 69
>pdb|2P6B|B Chain B, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
pdb|2P6B|D Chain D, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
Length = 156
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 59/132 (44%), Gaps = 12/132 (9%)
Query: 4 TIMEMLGHPQSQEA--LNEIIKEVDEDGSGELEFNEFCTLXXXXXXXXXXXXXXXXXXLR 61
++ E + P+ Q+ + +I D DG+GE++F EF LR
Sbjct: 25 SVEEFMSLPELQQNPLVQRVIDIFDTDGNGEVDFKEFI-----EGVSQFSVKGDKEQKLR 79
Query: 62 EAFMLYDREGNGYITTDVLREIISEL-DPNLDYEELNEMIEEI----DSDGSGTIDFDVL 116
AF +YD + +GYI+ L +++ + NL +L +++++ D DG G I F+
Sbjct: 80 FAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINADKDGDGRISFEEF 139
Query: 117 TRAFEAFDQEKK 128
D KK
Sbjct: 140 CAVVGGLDIHKK 151
Score = 40.0 bits (92), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 46/102 (45%), Gaps = 22/102 (21%)
Query: 96 LNEMIEEIDSDGSGTIDFD-----------------VLTRAFEAFDQEKKGSIPTDMVGT 138
+ +I+ D+DG+G +DF L AF +D +K G I +
Sbjct: 41 VQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQ 100
Query: 139 IMEM-----LGHPQSQEALNEIIKEVDEDGSGELEFNEFCTL 175
+++M L Q Q+ +++ I D+DG G + F EFC +
Sbjct: 101 VLKMMVGNNLKDTQLQQIVDKTIINADKDGDGRISFEEFCAV 142
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 40.4 bits (93), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 69/141 (48%), Gaps = 28/141 (19%)
Query: 60 LREAFMLYDREGNGYITT-------DVLREIISELD--PNLDYEELNEMIEEIDSDGSGT 110
L + F D+ G+G + +VLR +EL N++ EE++ +++E+D D +G
Sbjct: 357 LTDIFKKLDKNGDGQLDKKELIEGYNVLRNFKNELGELKNVE-EEVDNILKEVDFDKNGY 415
Query: 111 IDF----------------DVLTRAFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNE 154
I++ + L RAF FD +K G I + + + + S++ N+
Sbjct: 416 IEYSEFISVCMDKQILFSEERLRRAFNLFDTDKSGKITKEELANLFGLT--SISEKTWND 473
Query: 155 IIKEVDEDGSGELEFNEFCTL 175
++ E D++ ++F+EF ++
Sbjct: 474 VLGEADQNKDNMIDFDEFVSM 494
Score = 37.0 bits (84), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 50/100 (50%), Gaps = 8/100 (8%)
Query: 15 QEALNEIIKEVDEDGSGELEFNEFCTLXXXXXXXXXXXXXXXXXXLREAFMLYDREGNGY 74
+E ++ I+KEVD D +G +E++EF ++ LR AF L+D + +G
Sbjct: 398 EEEVDNILKEVDFDKNGYIEYSEFISV------CMDKQILFSEERLRRAFNLFDTDKSGK 451
Query: 75 ITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDFD 114
IT + L + ++ + N+++ E D + IDFD
Sbjct: 452 ITKEELANLFGL--TSISEKTWNDVLGEADQNKDNMIDFD 489
Score = 30.0 bits (66), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 31/137 (22%), Positives = 63/137 (45%), Gaps = 20/137 (14%)
Query: 70 EGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDFDVLTRAFEAFDQEKKG 129
EG+ + + I S+L + +EL ++ +++D +G G +D L +
Sbjct: 331 EGSQKLAQAAILFIGSKLTTLEERKELTDIFKKLDKNGDGQLDKKELIEGY--------- 381
Query: 130 SIPTDMVGTIMEMLGHPQS-QEALNEIIKEVDEDGSGELEFNEFCTLXXXXXXXXXXXXX 188
+++ LG ++ +E ++ I+KEVD D +G +E++EF ++
Sbjct: 382 ----NVLRNFKNELGELKNVEEEVDNILKEVDFDKNGYIEYSEFISV------CMDKQIL 431
Query: 189 XXXXXLREAFMLYDREE 205
LR AF L+D ++
Sbjct: 432 FSEERLRRAFNLFDTDK 448
>pdb|3LL8|B Chain B, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
pdb|3LL8|D Chain D, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
Length = 155
Score = 40.4 bits (93), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 59/132 (44%), Gaps = 12/132 (9%)
Query: 4 TIMEMLGHPQSQEA--LNEIIKEVDEDGSGELEFNEFCTLXXXXXXXXXXXXXXXXXXLR 61
++ E + P+ Q+ + +I D DG+GE++F EF LR
Sbjct: 24 SVEEFMSLPELQQNPLVQRVIDIFDTDGNGEVDFKEFI-----EGVSQFSVKGDKEQKLR 78
Query: 62 EAFMLYDREGNGYITTDVLREIISEL-DPNLDYEELNEMIEEI----DSDGSGTIDFDVL 116
AF +YD + +GYI+ L +++ + NL +L +++++ D DG G I F+
Sbjct: 79 FAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINADKDGDGRISFEEF 138
Query: 117 TRAFEAFDQEKK 128
D KK
Sbjct: 139 CAVVGGLDIHKK 150
Score = 40.0 bits (92), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 46/102 (45%), Gaps = 22/102 (21%)
Query: 96 LNEMIEEIDSDGSGTIDFD-----------------VLTRAFEAFDQEKKGSIPTDMVGT 138
+ +I+ D+DG+G +DF L AF +D +K G I +
Sbjct: 40 VQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQ 99
Query: 139 IMEM-----LGHPQSQEALNEIIKEVDEDGSGELEFNEFCTL 175
+++M L Q Q+ +++ I D+DG G + F EFC +
Sbjct: 100 VLKMMVGNNLKDTQLQQIVDKTIINADKDGDGRISFEEFCAV 141
>pdb|3DTP|E Chain E, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
pdb|3DTP|F Chain F, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
Length = 196
Score = 40.0 bits (92), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 58/133 (43%), Gaps = 22/133 (16%)
Query: 60 LREAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDF------ 113
+EAF L D++ +G+I+ + +R L +EL+ M+ E G I+F
Sbjct: 59 FKEAFQLIDQDKDGFISKNDIRATFDSLGRLCTEQELDSMVAE----APGPINFTMFLTI 114
Query: 114 -----------DVLTRAFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDED 162
DV+ AF FD E G + + + G SQ+ +++ + E D
Sbjct: 115 FGDRIAGTDEEDVIVNAFNLFD-EGDGKCKEETLKRSLTTWGEKFSQDEVDQALSEAPID 173
Query: 163 GSGELEFNEFCTL 175
G+G ++ +F +
Sbjct: 174 GNGLIDIKKFAQI 186
>pdb|3PM8|A Chain A, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
pdb|3PM8|B Chain B, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
Length = 197
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 69/135 (51%), Gaps = 26/135 (19%)
Query: 60 LREAFMLYDREGNGYITT----DVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDF-- 113
LR F+ D + +G +++ D L++I + P ++++++ +IDS+ SG I +
Sbjct: 59 LRNIFIALDVDNSGTLSSQEILDGLKKIGYQKIP----PDIHQVLRDIDSNASGQIHYTD 114
Query: 114 --------------DVLTRAFEAFDQEKKGSIPTDMVGTIM--EMLGHPQSQEALNEIIK 157
+V F+ FD + G I + + I + + +P +A++ +++
Sbjct: 115 FLAATIDKQTYLKKEVCLIPFKFFDIDGNGKISVEELKRIFGRDDIENPLIDKAIDSLLQ 174
Query: 158 EVDEDGSGELEFNEF 172
EVD +G GE++F+EF
Sbjct: 175 EVDLNGDGEIDFHEF 189
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/111 (20%), Positives = 55/111 (49%), Gaps = 10/111 (9%)
Query: 6 MEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTLXXXXXXXXXXXXXXXXXXLREAFM 65
++ +G+ + ++++++++D + SG++ + +F F
Sbjct: 83 LKKIGYQKIPPDIHQVLRDIDSNASGQIHYTDFLAATIDKQTYLKKEVCLI------PFK 136
Query: 66 LYDREGNGYITTDVLREIISELD---PNLDYEELNEMIEEIDSDGSGTIDF 113
+D +GNG I+ + L+ I D P +D + ++ +++E+D +G G IDF
Sbjct: 137 FFDIDGNGKISVEELKRIFGRDDIENPLID-KAIDSLLQEVDLNGDGEIDF 186
Score = 30.0 bits (66), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 10/62 (16%), Positives = 36/62 (58%)
Query: 111 IDFDVLTRAFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFN 170
++ + L F A D + G++ + + ++ +G+ + ++++++++D + SG++ +
Sbjct: 54 VEINNLRNIFIALDVDNSGTLSSQEILDGLKKIGYQKIPPDIHQVLRDIDSNASGQIHYT 113
Query: 171 EF 172
+F
Sbjct: 114 DF 115
Score = 28.9 bits (63), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 11/28 (39%), Positives = 22/28 (78%)
Query: 11 HPQSQEALNEIIKEVDEDGSGELEFNEF 38
+P +A++ +++EVD +G GE++F+EF
Sbjct: 162 NPLIDKAIDSLLQEVDLNGDGEIDFHEF 189
>pdb|3L19|A Chain A, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
pdb|3L19|B Chain B, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
Length = 214
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 56/139 (40%), Gaps = 42/139 (30%)
Query: 77 TDVLREIISELDPNLDYEEL------------------------NEMIEEIDSDGSGTID 112
TD+ R I D LD +EL + ++ D D +G ID
Sbjct: 66 TDIFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQIESEVDAILGAADFDRNGYID 125
Query: 113 F----------------DVLTRAFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEII 156
+ D L AF+ FDQ+ G I D + ++ L H +S+ E+I
Sbjct: 126 YSEFVTVAMDRKSLLSKDKLESAFQKFDQDGNGKISVDELASVF-GLDHLESK-TWKEMI 183
Query: 157 KEVDEDGSGELEFNEFCTL 175
+D + G+++F EFC +
Sbjct: 184 SGIDSNNDGDVDFEEFCKM 202
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 54/113 (47%), Gaps = 24/113 (21%)
Query: 12 PQSQEALNEIIKEVDEDGSGELEFNEFCTLXXXXXXXXXXXXXXXXXXLREAFMLYDREG 71
PQ + ++ I+ D D +G ++++EF T+ L AF +D++G
Sbjct: 103 PQIESEVDAILGAADFDRNGYIDYSEFVTVAMDRKSLLSKDK------LESAFQKFDQDG 156
Query: 72 NGYITTDVL--------------REIISELDPN----LDYEELNEMIEEIDSD 106
NG I+ D L +E+IS +D N +D+EE +MI+++ S+
Sbjct: 157 NGKISVDELASVFGLDHLESKTWKEMISGIDSNNDGDVDFEEFCKMIQKLCSN 209
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 56/139 (40%), Gaps = 42/139 (30%)
Query: 77 TDVLREIISELDPNLDYEEL------------------------NEMIEEIDSDGSGTID 112
TD+ R I D LD +EL + ++ D D +G ID
Sbjct: 349 TDIFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQIESEVDAILGAADFDRNGYID 408
Query: 113 F----------------DVLTRAFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEII 156
+ D L AF+ FDQ+ G I D + ++ L H +S+ E+I
Sbjct: 409 YSEFVTVAMDRKSLLSKDKLESAFQKFDQDGNGKISVDELASVFG-LDHLESK-TWKEMI 466
Query: 157 KEVDEDGSGELEFNEFCTL 175
+D + G+++F EFC +
Sbjct: 467 SGIDSNNDGDVDFEEFCKM 485
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 54/113 (47%), Gaps = 24/113 (21%)
Query: 12 PQSQEALNEIIKEVDEDGSGELEFNEFCTLXXXXXXXXXXXXXXXXXXLREAFMLYDREG 71
PQ + ++ I+ D D +G ++++EF T+ L AF +D++G
Sbjct: 386 PQIESEVDAILGAADFDRNGYIDYSEFVTVAMDRKSLLSKDK------LESAFQKFDQDG 439
Query: 72 NGYITTDVL--------------REIISELDPN----LDYEELNEMIEEIDSD 106
NG I+ D L +E+IS +D N +D+EE +MI+++ S+
Sbjct: 440 NGKISVDELASVFGLDHLESKTWKEMISGIDSNNDGDVDFEEFCKMIQKLCSN 492
>pdb|2BL0|B Chain B, Physarum Polycephalum Myosin Ii Regulatory Domain
Length = 145
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/129 (21%), Positives = 56/129 (43%), Gaps = 15/129 (11%)
Query: 60 LREAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDFDVLTR- 118
++E F ++D++ +G ++ + L + L N ELN + ++++ F + R
Sbjct: 7 IQECFQIFDKDNDGKVSIEELGSALRSLGKNPTNAELNTIKGQLNAKEFDLATFKTVYRK 66
Query: 119 --------------AFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDEDGS 164
AF A D+E G+I + ++ LG + + E++KEV G
Sbjct: 67 PIKTPTEQSKEMLDAFRALDKEGNGTIQEAELRQLLLNLGDALTSSEVEELMKEVSVSGD 126
Query: 165 GELEFNEFC 173
G + + F
Sbjct: 127 GAINYESFV 135
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 50/104 (48%), Gaps = 18/104 (17%)
Query: 85 SELDPNLDYEELNEMIEEIDSDGSGTIDF----------------DVLTRAFEAFDQEKK 128
S LD + E++++++ +D D +G I++ + L RAF FD +
Sbjct: 373 SMLDASAVEHEVDQVLDAVDFDKNGYIEYSEFVTVAMDRKTLLSRERLERAFRMFDSDNS 432
Query: 129 GSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEF 172
G I + + TI + E ++ EVD++ GE++F+EF
Sbjct: 433 GKISSTELATIFGV--SDVDSETWKSVLSEVDKNNDGEVDFDEF 474
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 50/104 (48%), Gaps = 18/104 (17%)
Query: 85 SELDPNLDYEELNEMIEEIDSDGSGTIDF----------------DVLTRAFEAFDQEKK 128
S LD + E++++++ +D D +G I++ + L RAF FD +
Sbjct: 396 SMLDASAVEHEVDQVLDAVDFDKNGYIEYSEFVTVAMDRKTLLSRERLERAFRMFDSDNS 455
Query: 129 GSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEF 172
G I + + TI + E ++ EVD++ GE++F+EF
Sbjct: 456 GKISSTELATIFGV--SDVDSETWKSVLSEVDKNNDGEVDFDEF 497
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 50/104 (48%), Gaps = 18/104 (17%)
Query: 85 SELDPNLDYEELNEMIEEIDSDGSGTIDF----------------DVLTRAFEAFDQEKK 128
S LD + E++++++ +D D +G I++ + L RAF FD +
Sbjct: 397 SMLDASAVEHEVDQVLDAVDFDKNGYIEYSEFVTVAMDRKTLLSRERLERAFRMFDSDNS 456
Query: 129 GSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEF 172
G I + + TI + E ++ EVD++ GE++F+EF
Sbjct: 457 GKISSTELATIFGV--SDVDSETWKSVLSEVDKNNDGEVDFDEF 498
>pdb|1C7V|A Chain A, Nmr Solution Structure Of The Calcium-Bound C-Terminal
Domain (W81-S161) Of Calcium Vector Protein From
Amphioxus
pdb|1C7W|A Chain A, Nmr Solution Structure Of The Calcium-Bound C-Terminal
Domain (W81-S161) Of Calcium Vector Protein From
Amphioxus
Length = 81
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 116 LTRAFEAFDQEKKGSIPTDMVGTIMEMLGH-PQSQEALNEIIKEVDEDGSGELEFNEFCT 174
+ RAF+ FD G I D IM+ +G P + + E +KE DEDG+G ++ EF
Sbjct: 10 ILRAFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVIDIPEFMD 69
Query: 175 L 175
L
Sbjct: 70 L 70
Score = 27.7 bits (60), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Query: 5 IMEMLGH-PQSQEALNEIIKEVDEDGSGELEFNEFCTL 41
IM+ +G P + + E +KE DEDG+G ++ EF L
Sbjct: 33 IMQKVGEEPLTDAEVEEAMKEADEDGNGVIDIPEFMDL 70
>pdb|1TIZ|A Chain A, Solution Structure Of A Calmodulin-Like Calcium-Binding
Domain From Arabidopsis Thaliana
Length = 67
Score = 37.4 bits (85), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 31/61 (50%)
Query: 61 REAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDFDVLTRAF 120
+ F +D+ +G ++ D RE+ P E++ + EEID DG+G ++ D T
Sbjct: 4 KRVFEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELNADEFTSCI 63
Query: 121 E 121
E
Sbjct: 64 E 64
Score = 35.8 bits (81), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 30/57 (52%)
Query: 118 RAFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCT 174
R FE FD+ K G + D + +QE + + +E+D DG+GEL +EF +
Sbjct: 5 RVFEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELNADEFTS 61
>pdb|3E3R|A Chain A, Crystal Structure And Biochemical Characterization Of
Recombinant Human Calcyphosine Delineates A Novel
Ef-hand-containing Protein Family
pdb|3E3R|B Chain B, Crystal Structure And Biochemical Characterization Of
Recombinant Human Calcyphosine Delineates A Novel
Ef-hand-containing Protein Family
Length = 204
Score = 37.4 bits (85), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 42/100 (42%), Gaps = 16/100 (16%)
Query: 64 FMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDFD--------- 114
F DR+G+ + D R+ +++L LD E + + D +GSGT+D +
Sbjct: 43 FRQLDRDGSRSLDADEFRQGLAKLGLVLDQAEAEGVCRKWDRNGSGTLDLEEFLRALRPP 102
Query: 115 -------VLTRAFEAFDQEKKGSIPTDMVGTIMEMLGHPQ 147
V+ AF D+ G + D + + HP+
Sbjct: 103 MSQAREAVIAAAFAKLDRSGDGVVTVDDLRGVYSGRAHPK 142
Score = 30.8 bits (68), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 31/79 (39%), Gaps = 7/79 (8%)
Query: 21 IIKEVDEDGSGELEFNEFCTLXXXXXXXXXXXXXXXXXXLREAFMLYDREGNGYITTDVL 80
+ ++ D +GSG L+ EF + AF DR G+G +T D L
Sbjct: 78 VCRKWDRNGSGTLDLEEFLR------ALRPPMSQAREAVIAAAFAKLDRSGDGVVTVDDL 131
Query: 81 REIIS-ELDPNLDYEELNE 98
R + S P + E E
Sbjct: 132 RGVYSGRAHPKVRSGEWTE 150
>pdb|2EC6|C Chain C, Placopecten Striated Muscle Myosin Ii
Length = 156
Score = 37.0 bits (84), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 27/43 (62%)
Query: 62 EAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEID 104
EAF +DREG G+I+ LR ++S L L EE++E+I D
Sbjct: 88 EAFKTFDREGQGFISGAELRHVLSGLGERLSDEEVDEIINLTD 130
Score = 30.0 bits (66), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Query: 119 AFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVD--EDGSGELEFNEF 172
AF+ FD+E +G I + ++ LG S E ++EII D ED G +++ EF
Sbjct: 89 AFKTFDREGQGFISGAELRHVLSGLGERLSDEEVDEIINLTDLQEDLEGNVKYEEF 144
>pdb|3PN7|C Chain C, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3PN7|F Chain F, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3TS5|C Chain C, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
pdb|3TS5|F Chain F, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
pdb|3TUY|C Chain C, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
pdb|3TUY|F Chain F, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
Length = 156
Score = 37.0 bits (84), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 27/43 (62%)
Query: 62 EAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEID 104
EAF +DREG G+I+ LR ++S L L EE++E+I D
Sbjct: 88 EAFKTFDREGQGFISGAELRHVLSGLGERLSDEEVDEIINLTD 130
Score = 30.0 bits (66), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Query: 119 AFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVD--EDGSGELEFNEF 172
AF+ FD+E +G I + ++ LG S E ++EII D ED G +++ EF
Sbjct: 89 AFKTFDREGQGFISGAELRHVLSGLGERLSDEEVDEIINLTDLQEDLEGNVKYEEF 144
>pdb|2OS8|C Chain C, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
pdb|2OTG|C Chain C, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
Length = 157
Score = 37.0 bits (84), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 27/43 (62%)
Query: 62 EAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEID 104
EAF +DREG G+I+ LR ++S L L EE++E+I D
Sbjct: 89 EAFKTFDREGQGFISGAELRHVLSGLGERLSDEEVDEIINLTD 131
Score = 30.0 bits (66), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Query: 119 AFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVD--EDGSGELEFNEF 172
AF+ FD+E +G I + ++ LG S E ++EII D ED G +++ EF
Sbjct: 90 AFKTFDREGQGFISGAELRHVLSGLGERLSDEEVDEIINLTDLQEDLEGNVKYEEF 145
>pdb|2EC6|B Chain B, Placopecten Striated Muscle Myosin Ii
Length = 133
Score = 36.6 bits (83), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 62/129 (48%), Gaps = 14/129 (10%)
Query: 60 LREAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEE------------IDSDG 107
++EAF + D+ +G+I + L+E S L D +EL M++E I SD
Sbjct: 4 MKEAFTMIDQNRDGFIDINDLKEEFSSLGRTPDDKELTAMLKEAPGPLNFTMFLSIFSDK 63
Query: 108 -SGTIDFDVLTRAFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDEDGSGE 166
SGT + + AF FD++ + + + ++E +G +++ + KE +G G+
Sbjct: 64 LSGTDSEETIRNAFGMFDEDATKKLNIEYIKDLLENMGDNFNKDEMRMTFKEAPVEG-GK 122
Query: 167 LEFNEFCTL 175
++ F +
Sbjct: 123 FDYVRFVAM 131
>pdb|3PN7|B Chain B, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3PN7|E Chain E, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3TS5|B Chain B, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
pdb|3TS5|E Chain E, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
Length = 161
Score = 36.2 bits (82), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 62/129 (48%), Gaps = 14/129 (10%)
Query: 60 LREAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEE------------IDSDG 107
++EAF + D+ +G+I + L+E+ S L D +EL M++E I SD
Sbjct: 25 MKEAFTMIDQNRDGFIDINDLKEMFSSLGRTPDDKELTAMLKEAPGPLNFTMFLSIFSDK 84
Query: 108 -SGTIDFDVLTRAFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDEDGSGE 166
SGT + + AF FD+ + + + ++E +G +++ + KE +G G+
Sbjct: 85 LSGTDSEETIRNAFGMFDELDTKKLNIEYIKDLLENMGDNFNKDEMRMTFKEAPVEG-GK 143
Query: 167 LEFNEFCTL 175
++ F +
Sbjct: 144 FDYVRFVAM 152
>pdb|3TUY|B Chain B, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
pdb|3TUY|E Chain E, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
Length = 161
Score = 36.2 bits (82), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 62/129 (48%), Gaps = 14/129 (10%)
Query: 60 LREAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEE------------IDSDG 107
++EAF + D+ +G+I + L+E+ S L D +EL M++E I SD
Sbjct: 25 MKEAFTMIDQNRDGFIDINDLKEMFSSLGRTPDDKELTAMLKEAPGPLNFTMFLSIFSDK 84
Query: 108 -SGTIDFDVLTRAFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDEDGSGE 166
SGT + + AF FD+ + + + ++E +G +++ + KE +G G+
Sbjct: 85 LSGTDSEETIRNAFGMFDELDTKKLNIEYIKDLLENMGDNFNKDEMRMTFKEAPVEG-GK 143
Query: 167 LEFNEFCTL 175
++ F +
Sbjct: 144 FDYVRFVAM 152
>pdb|2OS8|B Chain B, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
pdb|2OTG|B Chain B, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
Length = 157
Score = 36.2 bits (82), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 62/129 (48%), Gaps = 14/129 (10%)
Query: 60 LREAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEE------------IDSDG 107
++EAF + D+ +G+I + L+E+ S L D +EL M++E I SD
Sbjct: 21 MKEAFTMIDQNRDGFIDINDLKEMFSSLGRTPDDKELTAMLKEAPGPLNFTMFLSIFSDK 80
Query: 108 -SGTIDFDVLTRAFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDEDGSGE 166
SGT + + AF FD+ + + + ++E +G +++ + KE +G G+
Sbjct: 81 LSGTDSEETIRNAFGMFDELDTKKLNIEYIKDLLENMGDNFNKDEMRMTFKEAPVEG-GK 139
Query: 167 LEFNEFCTL 175
++ F +
Sbjct: 140 FDYVRFVAM 148
>pdb|1SCM|C Chain C, Structure Of The Regulatory Domain Of Scallop Myosin At
2.8 Angstroms Resolution
Length = 149
Score = 35.8 bits (81), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 28/43 (65%)
Query: 62 EAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEID 104
EAF +DREG G+I+ LR +++ L L E+++E+I+ D
Sbjct: 85 EAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTD 127
Score = 31.2 bits (69), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 32/56 (57%), Gaps = 2/56 (3%)
Query: 119 AFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVD--EDGSGELEFNEF 172
AF+ FD+E +G I + ++ LG S E ++EIIK D ED G +++ +F
Sbjct: 86 AFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQEDLEGNVKYEDF 141
>pdb|1GGW|A Chain A, Cdc4p From Schizosaccharomyces Pombe
Length = 140
Score = 35.8 bits (81), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 54/116 (46%), Gaps = 19/116 (16%)
Query: 61 REAFMLYDREGNGYITT----DVLR------------EIISELDPNLDYEELNEMIEEID 104
++AF L+DR G G I D+LR EI S L +D E+ +++ +
Sbjct: 8 KQAFSLFDRHGTGRIPKTSIGDLLRACGQNPTLAEITEIESTLPAEVDMEQFLQVLNRPN 67
Query: 105 S-DGSGTIDFDVLTRAFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEV 159
D G D + + F+ FD++ G I + ++ LG S E ++E++K V
Sbjct: 68 GFDMPG--DPEEFVKGFQVFDKDATGMIGVGELRYVLTSLGEKLSNEEMDELLKGV 121
>pdb|3JTD|C Chain C, Calcium-Free Scallop Myosin Regulatory Domain With
Elc-D19a Point Mutation
Length = 156
Score = 35.8 bits (81), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 28/43 (65%)
Query: 62 EAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEID 104
EAF +DREG G+I+ LR +++ L L E+++E+I+ D
Sbjct: 88 EAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTD 130
Score = 31.2 bits (69), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 32/56 (57%), Gaps = 2/56 (3%)
Query: 119 AFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVD--EDGSGELEFNEF 172
AF+ FD+E +G I + ++ LG S E ++EIIK D ED G +++ +F
Sbjct: 89 AFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQEDLEGNVKYEDF 144
>pdb|2W4T|Z Chain Z, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4V|Z Chain Z, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
pdb|2W4W|Z Chain Z, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
Length = 151
Score = 35.8 bits (81), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 28/43 (65%)
Query: 62 EAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEID 104
EAF +DREG G+I+ LR +++ L L E+++E+I+ D
Sbjct: 85 EAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTD 127
Score = 31.2 bits (69), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 32/56 (57%), Gaps = 2/56 (3%)
Query: 119 AFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVD--EDGSGELEFNEF 172
AF+ FD+E +G I + ++ LG S E ++EIIK D ED G +++ +F
Sbjct: 86 AFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQEDLEGNVKYEDF 141
>pdb|1DFK|Z Chain Z, Nucleotide-Free Scallop Myosin S1-Near Rigor State
pdb|1DFL|Z Chain Z, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
pdb|1DFL|X Chain X, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
Length = 152
Score = 35.8 bits (81), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 28/43 (65%)
Query: 62 EAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEID 104
EAF +DREG G+I+ LR +++ L L E+++E+I+ D
Sbjct: 86 EAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTD 128
Score = 31.2 bits (69), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 32/56 (57%), Gaps = 2/56 (3%)
Query: 119 AFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVD--EDGSGELEFNEF 172
AF+ FD+E +G I + ++ LG S E ++EIIK D ED G +++ +F
Sbjct: 87 AFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQEDLEGNVKYEDF 142
>pdb|1KK8|C Chain C, Scallop Myosin (S1-Adp-Befx) In The Actin-Detached
Conformation
Length = 154
Score = 35.8 bits (81), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 28/43 (65%)
Query: 62 EAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEID 104
EAF +DREG G+I+ LR +++ L L E+++E+I+ D
Sbjct: 88 EAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTD 130
Score = 31.2 bits (69), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 32/56 (57%), Gaps = 2/56 (3%)
Query: 119 AFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVD--EDGSGELEFNEF 172
AF+ FD+E +G I + ++ LG S E ++EIIK D ED G +++ +F
Sbjct: 89 AFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQEDLEGNVKYEDF 144
>pdb|1WDC|C Chain C, Scallop Myosin Regulatory Domain
pdb|1B7T|Z Chain Z, Myosin Digested By Papain
pdb|1KK7|Z Chain Z, Scallop Myosin In The Near Rigor Conformation
pdb|1L2O|C Chain C, Scallop Myosin S1-Adp-P-Pdm In The Actin-Detached
Conformation
pdb|1KQM|C Chain C, Scallop Myosin S1-Amppnp In The Actin-Detached
Conformation
pdb|1KWO|C Chain C, Scallop Myosin S1-Atpgammas-P-Pdm In The Actin-Detached
Conformation
pdb|1QVI|Z Chain Z, Crystal Structure Of Scallop Myosin S1 In The Pre-Power
Stroke State To 2.6 Angstrom Resolution: Flexibility And
Function In The Head
pdb|1S5G|Z Chain Z, Structure Of Scallop Myosin S1 Reveals A Novel Nucleotide
Conformation
pdb|1SR6|C Chain C, Structure Of Nucleotide-free Scallop Myosin S1
pdb|3JVT|C Chain C, Calcium-Bound Scallop Myosin Regulatory Domain (Lever Arm)
With Reconstituted Complete Light Chains
Length = 156
Score = 35.8 bits (81), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 28/43 (65%)
Query: 62 EAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEID 104
EAF +DREG G+I+ LR +++ L L E+++E+I+ D
Sbjct: 88 EAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTD 130
Score = 30.8 bits (68), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 32/56 (57%), Gaps = 2/56 (3%)
Query: 119 AFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVD--EDGSGELEFNEF 172
AF+ FD+E +G I + ++ LG S E ++EIIK D ED G +++ +F
Sbjct: 89 AFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQEDLEGNVKYEDF 144
>pdb|1F4O|A Chain A, Crystal Structure Of Grancalcin With Bound Calcium
pdb|1F4O|B Chain B, Crystal Structure Of Grancalcin With Bound Calcium
pdb|1F4Q|A Chain A, Crystal Structure Of Apo Grancalcin
pdb|1F4Q|B Chain B, Crystal Structure Of Apo Grancalcin
Length = 165
Score = 35.8 bits (81), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 51/127 (40%), Gaps = 20/127 (15%)
Query: 12 PQSQEALNEIIKEVDEDGSGELEFNEFCTLXXXXXXXXXXXXXXXXXXLREAFMLYDREG 71
P S E +I +D D +G++ FN F L +E FM D++G
Sbjct: 36 PFSLETCRIMIAMLDRDHTGKMGFNAFKELWAALNA------------WKENFMTVDQDG 83
Query: 72 NGYITTDVLREIISELDPNLDYEELNEMIEEIDSDG--------SGTIDFDVLTRAFEAF 123
+G + LR+ I + L + L +++ +G + + LT F+
Sbjct: 84 SGTVEHHELRQAIGLMGYRLSPQTLTTIVKRYSKNGRIFFDDYVACCVKLRALTDFFKKR 143
Query: 124 DQEKKGS 130
D ++GS
Sbjct: 144 DHLQQGS 150
Score = 28.5 bits (62), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 17/80 (21%), Positives = 34/80 (42%), Gaps = 10/80 (12%)
Query: 94 EELNEMIEEIDSDGSGTIDFDVLTRAFEAF----------DQEKKGSIPTDMVGTIMEML 143
E MI +D D +G + F+ + A DQ+ G++ + + ++
Sbjct: 40 ETCRIMIAMLDRDHTGKMGFNAFKELWAALNAWKENFMTVDQDGSGTVEHHELRQAIGLM 99
Query: 144 GHPQSQEALNEIIKEVDEDG 163
G+ S + L I+K ++G
Sbjct: 100 GYRLSPQTLTTIVKRYSKNG 119
>pdb|1K95|A Chain A, Crystal Structure Of Des(1-52)grancalcin With Bound
Calcium
pdb|1K94|A Chain A, Crystal Structure Of Des(1-52)grancalcin With Bound
Calcium
pdb|1K94|B Chain B, Crystal Structure Of Des(1-52)grancalcin With Bound
Calcium
Length = 165
Score = 35.4 bits (80), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 50/127 (39%), Gaps = 20/127 (15%)
Query: 12 PQSQEALNEIIKEVDEDGSGELEFNEFCTLXXXXXXXXXXXXXXXXXXLREAFMLYDREG 71
P S E +I +D D +G++ FN F L +E FM D++G
Sbjct: 36 PFSLETCRIMIAMLDRDHTGKMGFNAFKELWAALNA------------WKENFMTVDQDG 83
Query: 72 NGYITTDVLREIISELDPNLDYEELNEMIEEIDSDG--------SGTIDFDVLTRAFEAF 123
+G + LR+ I + L + L +++ +G + + LT F
Sbjct: 84 SGTVEHHELRQAIGLMGYRLSPQTLTTIVKRYSKNGRIFFDDYVACCVKLRALTDFFRKR 143
Query: 124 DQEKKGS 130
D ++GS
Sbjct: 144 DHLQQGS 150
Score = 28.5 bits (62), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 17/80 (21%), Positives = 34/80 (42%), Gaps = 10/80 (12%)
Query: 94 EELNEMIEEIDSDGSGTIDFDVLTRAFEAF----------DQEKKGSIPTDMVGTIMEML 143
E MI +D D +G + F+ + A DQ+ G++ + + ++
Sbjct: 40 ETCRIMIAMLDRDHTGKMGFNAFKELWAALNAWKENFMTVDQDGSGTVEHHELRQAIGLM 99
Query: 144 GHPQSQEALNEIIKEVDEDG 163
G+ S + L I+K ++G
Sbjct: 100 GYRLSPQTLTTIVKRYSKNG 119
>pdb|2FCE|A Chain A, Solution Structure Of C-Lobe Myosin Light Chain From
Saccharomices Cerevisiae
Length = 70
Score = 35.4 bits (80), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 15/57 (26%), Positives = 33/57 (57%)
Query: 116 LTRAFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEF 172
+AF+ FD+E G + + ++ LG + ++E++K V+ D +GE+++ +F
Sbjct: 7 FVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDYKKF 63
Score = 34.7 bits (78), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 33/52 (63%)
Query: 62 EAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDF 113
+AF ++D+E G ++ LR +++ L L E++E+++ ++ D +G ID+
Sbjct: 9 KAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDY 60
>pdb|1DFK|Y Chain Y, Nucleotide-Free Scallop Myosin S1-Near Rigor State
pdb|1DFL|Y Chain Y, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
pdb|1DFL|W Chain W, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
Length = 139
Score = 35.0 bits (79), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 29/129 (22%), Positives = 65/129 (50%), Gaps = 14/129 (10%)
Query: 60 LREAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEE------------IDSDG 107
++EAF + D + +G+++ + ++ I +L D +EL M++E I SD
Sbjct: 9 MKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLKEAPGPLNFTMFLSIFSDK 68
Query: 108 -SGTIDFDVLTRAFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDEDGSGE 166
SGT + + AF FD+++ + + + ++E +G +++ + KE +G G+
Sbjct: 69 LSGTDSEETIRNAFAMFDEQETKKLNIEYIKDLLENMGDNFNKDEMRMTFKEAPVEG-GK 127
Query: 167 LEFNEFCTL 175
++ +F +
Sbjct: 128 FDYVKFTAM 136
>pdb|2L2E|A Chain A, Solution Nmr Structure Of Myristoylated Ncs1p In Apo Form
Length = 190
Score = 35.0 bits (79), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 57/131 (43%), Gaps = 29/131 (22%)
Query: 72 NGYITTDVLREIISELDPNLDYEELNEMIEEI-DSDGSGTIDF----------------D 114
+G++ ++I + P D E + + D+D +G IDF D
Sbjct: 40 SGHLNKSEFQKIYKQFFPFGDPSAFAEYVFNVFDADKNGYIDFKEFICALSVTSRGELND 99
Query: 115 VLTRAFEAFDQEKKGSIPTD----MVGTIMEMLGH----PQSQEA----LNEIIKEVDED 162
L AF+ +D + G I D +V I +M+G P+ ++ +N+I +D++
Sbjct: 100 KLIWAFQLYDLDNNGLISYDEMLRIVDAIYKMVGSMVKLPEDEDTPEKRVNKIFNMMDKN 159
Query: 163 GSGELEFNEFC 173
G+L EFC
Sbjct: 160 KDGQLTLEEFC 170
>pdb|2W4T|Y Chain Y, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4V|Y Chain Y, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
pdb|2W4W|Y Chain Y, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
Length = 136
Score = 35.0 bits (79), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 29/129 (22%), Positives = 65/129 (50%), Gaps = 14/129 (10%)
Query: 60 LREAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEE------------IDSDG 107
++EAF + D + +G+++ + ++ I +L D +EL M++E I SD
Sbjct: 6 MKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLKEAPGPLNFTMFLSIFSDK 65
Query: 108 -SGTIDFDVLTRAFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDEDGSGE 166
SGT + + AF FD+++ + + + ++E +G +++ + KE +G G+
Sbjct: 66 LSGTDSEETIRNAFAMFDEQETKKLNIEYIKDLLENMGDNFNKDEMRMTFKEAPVEG-GK 124
Query: 167 LEFNEFCTL 175
++ +F +
Sbjct: 125 FDYVKFTAM 133
>pdb|1SCM|B Chain B, Structure Of The Regulatory Domain Of Scallop Myosin At
2.8 Angstroms Resolution
Length = 145
Score = 35.0 bits (79), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 29/129 (22%), Positives = 65/129 (50%), Gaps = 14/129 (10%)
Query: 60 LREAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEE------------IDSDG 107
++EAF + D + +G+++ + ++ I +L D +EL M++E I SD
Sbjct: 9 MKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLKEAPGPLNFTMFLSIFSDK 68
Query: 108 -SGTIDFDVLTRAFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDEDGSGE 166
SGT + + AF FD+++ + + + ++E +G +++ + KE +G G+
Sbjct: 69 LSGTDSEETIRNAFAMFDEQETKKLNIEYIKDLLENMGDNFNKDEMRMTFKEAPVEG-GK 127
Query: 167 LEFNEFCTL 175
++ +F +
Sbjct: 128 FDYVKFTAM 136
>pdb|1KK8|B Chain B, Scallop Myosin (S1-Adp-Befx) In The Actin-Detached
Conformation
Length = 139
Score = 35.0 bits (79), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 29/129 (22%), Positives = 65/129 (50%), Gaps = 14/129 (10%)
Query: 60 LREAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEE------------IDSDG 107
++EAF + D + +G+++ + ++ I +L D +EL M++E I SD
Sbjct: 8 MKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLKEAPGPLNFTMFLSIFSDK 67
Query: 108 -SGTIDFDVLTRAFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDEDGSGE 166
SGT + + AF FD+++ + + + ++E +G +++ + KE +G G+
Sbjct: 68 LSGTDSEETIRNAFAMFDEQETKKLNIEYIKDLLENMGDNFNKDEMRMTFKEAPVEG-GK 126
Query: 167 LEFNEFCTL 175
++ +F +
Sbjct: 127 FDYVKFTAM 135
>pdb|1WDC|B Chain B, Scallop Myosin Regulatory Domain
pdb|1B7T|Y Chain Y, Myosin Digested By Papain
pdb|1KK7|Y Chain Y, Scallop Myosin In The Near Rigor Conformation
pdb|1L2O|B Chain B, Scallop Myosin S1-Adp-P-Pdm In The Actin-Detached
Conformation
pdb|1KQM|B Chain B, Scallop Myosin S1-Amppnp In The Actin-Detached
Conformation
pdb|1KWO|B Chain B, Scallop Myosin S1-Atpgammas-P-Pdm In The Actin-Detached
Conformation
pdb|1QVI|Y Chain Y, Crystal Structure Of Scallop Myosin S1 In The Pre-Power
Stroke State To 2.6 Angstrom Resolution: Flexibility And
Function In The Head
pdb|1S5G|Y Chain Y, Structure Of Scallop Myosin S1 Reveals A Novel Nucleotide
Conformation
pdb|1SR6|B Chain B, Structure Of Nucleotide-free Scallop Myosin S1
pdb|3JTD|B Chain B, Calcium-Free Scallop Myosin Regulatory Domain With
Elc-D19a Point Mutation
pdb|3JVT|B Chain B, Calcium-Bound Scallop Myosin Regulatory Domain (Lever Arm)
With Reconstituted Complete Light Chains
Length = 156
Score = 35.0 bits (79), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 29/129 (22%), Positives = 65/129 (50%), Gaps = 14/129 (10%)
Query: 60 LREAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEE------------IDSDG 107
++EAF + D + +G+++ + ++ I +L D +EL M++E I SD
Sbjct: 20 MKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLKEAPGPLNFTMFLSIFSDK 79
Query: 108 -SGTIDFDVLTRAFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDEDGSGE 166
SGT + + AF FD+++ + + + ++E +G +++ + KE +G G+
Sbjct: 80 LSGTDSEETIRNAFAMFDEQETKKLNIEYIKDLLENMGDNFNKDEMRMTFKEAPVEG-GK 138
Query: 167 LEFNEFCTL 175
++ +F +
Sbjct: 139 FDYVKFTAM 147
>pdb|1K9U|A Chain A, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
pdb|1K9U|B Chain B, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
Length = 78
Score = 35.0 bits (79), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Query: 114 DVLTRAFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFC 173
D + R F+ FD G I + + LG + E + ++ E+D DG G ++FNEF
Sbjct: 3 DDMERIFKRFDTNGDGKISLSELTDALRTLGSTSADE-VQRMMAEIDTDGDGFIDFNEFI 61
Query: 174 TL 175
+
Sbjct: 62 SF 63
Score = 33.1 bits (74), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 30/55 (54%), Gaps = 9/55 (16%)
Query: 64 FMLYDREGNGYIT----TDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDFD 114
F +D G+G I+ TD LR + S +E+ M+ EID+DG G IDF+
Sbjct: 9 FKRFDTNGDGKISLSELTDALRTLGST-----SADEVQRMMAEIDTDGDGFIDFN 58
Score = 26.9 bits (58), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Query: 6 MEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTL 41
+ LG + E + ++ E+D DG G ++FNEF +
Sbjct: 29 LRTLGSTSADE-VQRMMAEIDTDGDGFIDFNEFISF 63
>pdb|2LVI|A Chain A, Solution Structure Of Apo-phl P 7
pdb|2LVJ|A Chain A, Solution Structure Of Hemi-mg-bound Phl P 7
pdb|2LVK|A Chain A, Solution Structure Of Ca-bound Phl P 7
Length = 77
Score = 34.7 bits (78), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Query: 114 DVLTRAFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFC 173
D + R F+ FD G I + + LG + E + ++ E+D DG G ++FNEF
Sbjct: 2 DDMERIFKRFDTNGDGKISLSELTDALRTLGSTSADE-VQRMMAEIDTDGDGFIDFNEFI 60
Query: 174 TL 175
+
Sbjct: 61 SF 62
Score = 33.1 bits (74), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 30/55 (54%), Gaps = 9/55 (16%)
Query: 64 FMLYDREGNGYIT----TDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDFD 114
F +D G+G I+ TD LR + S +E+ M+ EID+DG G IDF+
Sbjct: 8 FKRFDTNGDGKISLSELTDALRTLGST-----SADEVQRMMAEIDTDGDGFIDFN 57
Score = 26.9 bits (58), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Query: 6 MEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTL 41
+ LG + E + ++ E+D DG G ++FNEF +
Sbjct: 28 LRTLGSTSADE-VQRMMAEIDTDGDGFIDFNEFISF 62
>pdb|2JOJ|A Chain A, Nmr Solution Structure Of N-Terminal Domain Of Euplotes
Octocarinatus Centrin
Length = 77
Score = 34.7 bits (78), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 31/60 (51%)
Query: 116 LTRAFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTL 175
+ AF+ FD K GSI + M LG + + E++ E D +G+G + F++F +
Sbjct: 9 IKEAFDLFDTNKTGSIDYHELKVAMRALGFDVKKPEILELMNEYDREGNGYIGFDDFLDI 68
Score = 30.4 bits (67), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 30/55 (54%)
Query: 60 LREAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDFD 114
++EAF L+D G I L+ + L ++ E+ E++ E D +G+G I FD
Sbjct: 9 IKEAFDLFDTNKTGSIDYHELKVAMRALGFDVKKPEILELMNEYDREGNGYIGFD 63
Score = 29.3 bits (64), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 14/26 (53%), Positives = 17/26 (65%)
Query: 67 YDREGNGYITTDVLREIISELDPNLD 92
YDREGNGYI D +I++E N D
Sbjct: 52 YDREGNGYIGFDDFLDIMTEKIKNRD 77
>pdb|3I5G|C Chain C, Crystal Structure Of Rigor-Like Squid Myosin S1
pdb|3I5H|C Chain C, The Crystal Structure Of Rigor Like Squid Myosin S1 In The
Absence Of Nucleotide
pdb|3I5I|C Chain C, The Crystal Structure Of Squid Myosin S1 In The Presence
Of So4 2-
pdb|3I5F|C Chain C, Crystal Structure Of Squid Mg.Adp Myosin S1
Length = 159
Score = 34.3 bits (77), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 94 EELNEMIEEIDSDGSGTIDFDVLTRAFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALN 153
EE+ + EE+ S +GT D AF+ FD+E +G I + + +++MLG +++ N
Sbjct: 66 EEILPIYEEMSSKDTGTA-ADEFMEAFKTFDREGQGLISSAEIRNVLKMLGERITEDQCN 124
Query: 154 EIIK--EVDEDGSGELEF 169
+I ++ ED G +++
Sbjct: 125 DIFTFCDIREDIDGNIKY 142
Score = 30.0 bits (66), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Query: 62 EAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIE--EIDSDGSGTIDFDVLTRA 119
EAF +DREG G I++ +R ++ L + ++ N++ +I D G I ++ L +
Sbjct: 89 EAFKTFDREGQGLISSAEIRNVLKMLGERITEDQCNDIFTFCDIREDIDGNIKYEDLMKK 148
Query: 120 FEA 122
A
Sbjct: 149 VMA 151
>pdb|2OPO|A Chain A, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|B Chain B, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|C Chain C, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|D Chain D, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
Length = 86
Score = 34.3 bits (77), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Query: 118 RAFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFC 173
R F+ FD G I + +G ++ LG E + ++ E+D DG G + F+EF
Sbjct: 15 RIFKRFDTNGDGKISSSELGDALKTLGSVTPDE-VRRMMAEIDTDGDGFISFDEFT 69
Score = 33.5 bits (75), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 64 FMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDFDVLT 117
F +D G+G I++ L + + L ++ +E+ M+ EID+DG G I FD T
Sbjct: 17 FKRFDTNGDGKISSSELGDALKTL-GSVTPDEVRRMMAEIDTDGDGFISFDEFT 69
>pdb|1S6J|A Chain A, N-Terminal Region Of The Ca2+-Saturated Calcium Regulatory
Domain (Cld) From Soybean Calcium-Dependent Protein
Kinase- Alpha (Cdpk)
Length = 87
Score = 33.9 bits (76), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 32/54 (59%)
Query: 60 LREAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDF 113
L+E F + D + +G IT D L++ + + L E+ ++++ D D SGTID+
Sbjct: 25 LKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDY 78
>pdb|1XVJ|A Chain A, Crystal Structure Of Rat Alpha-Parvalbumin D94sG98E MUTANT
pdb|1XVJ|B Chain B, Crystal Structure Of Rat Alpha-Parvalbumin D94sG98E MUTANT
Length = 109
Score = 33.9 bits (76), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Query: 114 DVLTRAFEAFDQEKKGSIPTDMVGTIMEMLGHPQ---SQEALNEIIKEVDEDGSGELEFN 170
D + + F D++K G I D +G+I++ S + ++ D+DGSG++E
Sbjct: 41 DDVKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGSGKIEVE 100
Query: 171 EFCTL 175
EF TL
Sbjct: 101 EFSTL 105
>pdb|3KHE|A Chain A, Crystal Structure Of The Calcium-Loaded Calmodulin-Like
Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii
pdb|3KHE|B Chain B, Crystal Structure Of The Calcium-Loaded Calmodulin-Like
Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii
Length = 191
Score = 33.5 bits (75), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 53/119 (44%), Gaps = 24/119 (20%)
Query: 3 GTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTLXXXXXXXXXXXXXXXXXXLRE 62
G + L Q + ++ I++ VD D +G +E++EF T+ L
Sbjct: 74 GDTVSDLDSSQIEAEVDHILQSVDFDRNGYIEYSEFVTVCMDKQLLLSRER------LLA 127
Query: 63 AFMLYDREGNGYITTDVL--------------REIISELDPN----LDYEELNEMIEEI 103
AF +D +G+G IT + L +++ E D N +D+EE EM+++I
Sbjct: 128 AFQQFDSDGSGKITNEELGRLFGVTEVDDETWHQVLQECDKNNDGEVDFEEFVEMMQKI 186
Score = 32.3 bits (72), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 44/106 (41%), Gaps = 24/106 (22%)
Query: 67 YDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDFDVLTRAFEAFDQE 126
+DR NGYI + + L E L ++ DSDGSG I + L R F
Sbjct: 98 FDR--NGYIEYSEFVTVCMDKQLLLSRERLLAAFQQFDSDGSGKITNEELGRLF------ 149
Query: 127 KKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEF 172
G D E +++++E D++ GE++F EF
Sbjct: 150 --GVTEVD--------------DETWHQVLQECDKNNDGEVDFEEF 179
>pdb|1BJF|A Chain A, Crystal Structure Of Recombinant Bovine Neurocalcin Delta
At 2.4 Angstroms
pdb|1BJF|B Chain B, Crystal Structure Of Recombinant Bovine Neurocalcin Delta
At 2.4 Angstroms
Length = 193
Score = 33.5 bits (75), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 30/68 (44%), Gaps = 6/68 (8%)
Query: 20 EIIKEVDEDGSGELEFNEFCTLXXXXXXXXXXXXXXXXXXLREAFMLYDREGNGYITTDV 79
+ + D +G G ++F EF L+ AF +YD +GNGYI+
Sbjct: 67 HVFRTFDANGDGTIDFREFII------ALSVTSRGKLEQKLKWAFSMYDLDGNGYISKAE 120
Query: 80 LREIISEL 87
+ EI+ +
Sbjct: 121 MLEIVQAI 128
>pdb|2BEC|A Chain A, Crystal Structure Of Chp2 In Complex With Its Binding
Region In Nhe1 And Insights Into The Mechanism Of Ph
Regulation
Length = 202
Score = 33.1 bits (74), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 60/153 (39%), Gaps = 44/153 (28%)
Query: 60 LREAFMLYDREGNGYITTDVLREIIS-ELDPNLDYEELNEMIEEIDSDGSGTIDFDVLTR 118
L F DR GY++ L++I + ++P D +IE DGS +DF R
Sbjct: 31 LHHRFRALDRNKKGYLSRMDLQQIGALAVNPLGD-----RIIESFFPDGSQRVDFPGFVR 85
Query: 119 ---------------------------------AFEAFDQEKKGSIPT-DMVGTIMEMLG 144
AF+ +D ++ G I +M+ + M+G
Sbjct: 86 VLAHFRPVEDEDTETQDPKKPEPLNSRRNKLHYAFQLYDLDRDGKISRHEMLQVLRLMVG 145
Query: 145 HPQSQEALNEI----IKEVDEDGSGELEFNEFC 173
++E L I ++E DEDG G + F EF
Sbjct: 146 VQVTEEQLENIADRTVQEADEDGDGAVSFVEFT 178
Score = 33.1 bits (74), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 38/77 (49%), Gaps = 5/77 (6%)
Query: 60 LREAFMLYDREGNGYITT----DVLREIISELDPNLDYEEL-NEMIEEIDSDGSGTIDFD 114
L AF LYD + +G I+ VLR ++ E + + ++E D DG G + F
Sbjct: 116 LHYAFQLYDLDRDGKISRHEMLQVLRLMVGVQVTEEQLENIADRTVQEADEDGDGAVSFV 175
Query: 115 VLTRAFEAFDQEKKGSI 131
T++ E D E+K SI
Sbjct: 176 EFTKSLEKMDVEQKMSI 192
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 33.1 bits (74), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 53/119 (44%), Gaps = 24/119 (20%)
Query: 3 GTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTLXXXXXXXXXXXXXXXXXXLRE 62
G + L Q + ++ I++ VD D +G +E++EF T+ L
Sbjct: 348 GDTVSDLDSSQIEAEVDHILQSVDFDRNGYIEYSEFVTVCMDKQLLLSRER------LLA 401
Query: 63 AFMLYDREGNGYITTDVL--------------REIISELDPN----LDYEELNEMIEEI 103
AF +D +G+G IT + L +++ E D N +D+EE EM+++I
Sbjct: 402 AFQQFDSDGSGKITNEELGRLFGVTEVDDETWHQVLQECDKNNDGEVDFEEFVEMMQKI 460
Score = 32.3 bits (72), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 44/106 (41%), Gaps = 24/106 (22%)
Query: 67 YDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDFDVLTRAFEAFDQE 126
+DR NGYI + + L E L ++ DSDGSG I + L R F
Sbjct: 372 FDR--NGYIEYSEFVTVCMDKQLLLSRERLLAAFQQFDSDGSGKITNEELGRLF------ 423
Query: 127 KKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEF 172
G D E +++++E D++ GE++F EF
Sbjct: 424 --GVTEVD--------------DETWHQVLQECDKNNDGEVDFEEF 453
>pdb|2W4A|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4G|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
pdb|2W4H|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
Length = 145
Score = 32.7 bits (73), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 61/137 (44%), Gaps = 26/137 (18%)
Query: 60 LREAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMI-----EEIDSDG------- 107
+EAF+L+DR G+ IT + +I+ L N E+N+++ EE+++
Sbjct: 6 FKEAFLLFDRTGDAKITLSQVGDIVRALGQNPTNAEINKILGNPSKEEMNAKKITFEEFL 65
Query: 108 -----------SGTIDFDVLTRAFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEII 156
GT F+ FD+E G++ + ++ LG ++E + E++
Sbjct: 66 PMLQAAANNKDQGT--FEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMTEEEVEELM 123
Query: 157 KEVDEDGSGELEFNEFC 173
K ED +G + + F
Sbjct: 124 KG-QEDSNGCINYEAFV 139
>pdb|1JC2|A Chain A, Complex Of The C-Domain Of Troponin C With Residues 1-40
Of Troponin I
Length = 76
Score = 32.7 bits (73), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 16/63 (25%), Positives = 34/63 (53%)
Query: 60 LREAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDFDVLTRA 119
L F ++D+ +G+I + L EI+ ++ E++ +++++ D + G IDFD +
Sbjct: 12 LANCFRIFDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDSDKNNDGRIDFDEFLKM 71
Query: 120 FEA 122
E
Sbjct: 72 MEG 74
>pdb|2JNX|A Chain A, Nmr Derived Solution Structure Of An Ef-Hand Calcium
Binding Protein From Entamoeba Histolytica
Length = 134
Score = 32.7 bits (73), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 46/99 (46%), Gaps = 7/99 (7%)
Query: 13 QSQEALNEIIKEVDEDGSGELEFNEFCTLXXXXXXXXXXXXXXXXXXLREAFMLYDREGN 72
++++ L I K +D DG+GE++ EF L+ + L D +G+
Sbjct: 33 KNEQLLQLIFKAIDIDGNGEIDLAEFTKF---AAAVKEQDLSDEKVGLKILYKLMDADGD 89
Query: 73 GYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTI 111
G +T +E ++ YE++ + I + D++G G I
Sbjct: 90 GKLT----KEEVTTFFKKFGYEKVVDQIMKADANGDGYI 124
Score = 30.4 bits (67), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 27/131 (20%), Positives = 55/131 (41%), Gaps = 23/131 (17%)
Query: 64 FMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDFDVLTR----- 118
F D G+G ++ + ++ +S P + + L + + ID DG+G ID T+
Sbjct: 6 FKQLDANGDGSVSYEEVKAFVSSKRPIKNEQLLQLIFKAIDIDGNGEIDLAEFTKFAAAV 65
Query: 119 --------------AFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDEDGS 164
++ D + G + + V T + G+ ++ +++I+K D +G
Sbjct: 66 KEQDLSDEKVGLKILYKLMDADGDGKLTKEEVTTFFKKFGY---EKVVDQIMK-ADANGD 121
Query: 165 GELEFNEFCTL 175
G + EF
Sbjct: 122 GYITLEEFLAF 132
>pdb|1M8Q|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|U Chain U, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
Length = 147
Score = 32.7 bits (73), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 24/41 (58%)
Query: 60 LREAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMI 100
+EAF+L+DR G+ IT + +I L N E+N+++
Sbjct: 8 FKEAFLLFDRTGDAKITASQVGDIARALGQNPTNAEINKIL 48
>pdb|1H4B|A Chain A, Solution Structure Of The Birch Pollen Allergen Bet V 4
Length = 84
Score = 32.7 bits (73), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Query: 64 FMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDFDVLT 117
F +D G+G I+ L E + L ++ +E+ M+ EID+DG G I F T
Sbjct: 15 FKRFDANGDGKISAAELGEALKTL-GSITPDEVKHMMAEIDTDGDGFISFQEFT 67
Score = 31.6 bits (70), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Query: 118 RAFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFC 173
R F+ FD G I +G ++ LG E + ++ E+D DG G + F EF
Sbjct: 13 RIFKRFDANGDGKISAAELGEALKTLGSITPDE-VKHMMAEIDTDGDGFISFQEFT 67
>pdb|2MYS|C Chain C, Myosin Subfragment-1, Alpha Carbon Coordinates Only For
The Two Light Chains
Length = 149
Score = 32.3 bits (72), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 24/41 (58%)
Query: 60 LREAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMI 100
+EAF+L+DR G+ IT + +I L N E+N+++
Sbjct: 10 FKEAFLLFDRTGDAKITASQVGDIARALGQNPTNAEINKIL 50
>pdb|1Y1X|A Chain A, Structural Analysis Of A Homolog Of Programmed Cell Death
6 Protein From Leishmania Major Friedlin
pdb|1Y1X|B Chain B, Structural Analysis Of A Homolog Of Programmed Cell Death
6 Protein From Leishmania Major Friedlin
Length = 191
Score = 32.3 bits (72), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 26/132 (19%), Positives = 52/132 (39%), Gaps = 22/132 (16%)
Query: 10 GHPQSQEALNEIIKEVDEDGSGELEFNEFCTLXXXXXXXXXXXXXXXXXXLREAFMLYDR 69
G P S +++ D++ SGE+ F+EF L +RE F D
Sbjct: 57 GVPFSLATTEKLLHMYDKNHSGEITFDEFKDLHHFILS------------MREGFRKRDS 104
Query: 70 EGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDFD----------VLTRA 119
G+G + ++ +R + + + ++ + D G++ FD +
Sbjct: 105 SGDGRLDSNEVRAALLSSGYQVSEQTFQALMRKFDRQRRGSLGFDDYVELSIFVCRVRNV 164
Query: 120 FEAFDQEKKGSI 131
F +D+E+ G +
Sbjct: 165 FAFYDRERTGQV 176
Score = 31.6 bits (70), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 36/84 (42%), Gaps = 20/84 (23%)
Query: 92 DYEELNEMIEEIDSDGSGTIDFDVLTRAFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEA 151
D +EL E +D+DGSG I S+P + + G P S
Sbjct: 25 DNQELMEWFRAVDTDGSGAI------------------SVPE--LNAALSSAGVPFSLAT 64
Query: 152 LNEIIKEVDEDGSGELEFNEFCTL 175
+++ D++ SGE+ F+EF L
Sbjct: 65 TEKLLHMYDKNHSGEITFDEFKDL 88
Score = 27.3 bits (59), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 36/195 (18%), Positives = 64/195 (32%), Gaps = 44/195 (22%)
Query: 11 HPQSQEALNEIIKEVDEDGSGELEFNEFCTLXXXXXXXXXXXXXXXXXXLREAFMLYDRE 70
H + L E + VD DGSG + E + +YD+
Sbjct: 22 HMNDNQELMEWFRAVDTDGSGAISVPELNAALSSAGVPFSLATTE------KLLHMYDKN 75
Query: 71 GNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDFDVLTRAFEAFDQEKKGS 130
+G IT D +++ + + E + DS G G +D
Sbjct: 76 HSGEITFDEFKDLHHFI------LSMREGFRKRDSSGDGRLD------------------ 111
Query: 131 IPTDMVGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTLXXXXXXXXXXXXXXX 190
++ V + G+ S++ ++++ D G L F+++ L
Sbjct: 112 --SNEVRAALLSSGYQVSEQTFQALMRKFDRQRRGSLGFDDYVEL------------SIF 157
Query: 191 XXXLREAFMLYDREE 205
+R F YDRE
Sbjct: 158 VCRVRNVFAFYDRER 172
>pdb|2CT9|A Chain A, The Crystal Structure Of Calcineurin B Homologous Proein 1
(Chp1)
pdb|2CT9|B Chain B, The Crystal Structure Of Calcineurin B Homologous Proein 1
(Chp1)
Length = 208
Score = 32.3 bits (72), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 5/74 (6%)
Query: 63 AFMLYDREGNGYITTDVLREIISEL-DPNLDYEEL----NEMIEEIDSDGSGTIDFDVLT 117
AF LYD + + I+ D L +++ + N+ E+L + I+E D DG I F
Sbjct: 118 AFRLYDLDKDDKISRDELLQVLRMMVGVNISDEQLGSIADRTIQEADQDGDSAISFTEFV 177
Query: 118 RAFEAFDQEKKGSI 131
+ E D E+K SI
Sbjct: 178 KVLEKVDVEQKMSI 191
Score = 28.9 bits (63), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 5/62 (8%)
Query: 119 AFEAFDQEKKGSIPTDMVGTIMEML-GHPQSQEALNEI----IKEVDEDGSGELEFNEFC 173
AF +D +K I D + ++ M+ G S E L I I+E D+DG + F EF
Sbjct: 118 AFRLYDLDKDDKISRDELLQVLRMMVGVNISDEQLGSIADRTIQEADQDGDSAISFTEFV 177
Query: 174 TL 175
+
Sbjct: 178 KV 179
>pdb|2JPT|A Chain A, Structural Changes Induced In Apo-s100a1 Protein By The
Disulphide Formation Between Its Cys85 Residue And B-
Mercaptoethanol
pdb|2JPT|B Chain B, Structural Changes Induced In Apo-s100a1 Protein By The
Disulphide Formation Between Its Cys85 Residue And B-
Mercaptoethanol
Length = 93
Score = 32.3 bits (72), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 32/51 (62%), Gaps = 4/51 (7%)
Query: 125 QEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTL 175
+E K + T++ G L + +A+++++KE+DEDG GE++F E+ L
Sbjct: 31 KELKELLQTELSG----FLDAQKDADAVDKVMKELDEDGDGEVDFQEYVVL 77
Score = 32.3 bits (72), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 24/34 (70%)
Query: 8 MLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTL 41
L + +A+++++KE+DEDG GE++F E+ L
Sbjct: 44 FLDAQKDADAVDKVMKELDEDGDGEVDFQEYVVL 77
Score = 28.5 bits (62), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 31/51 (60%), Gaps = 6/51 (11%)
Query: 69 REGNGY-ITTDVLREIISE-----LDPNLDYEELNEMIEEIDSDGSGTIDF 113
+EG+ Y ++ L+E++ LD D + ++++++E+D DG G +DF
Sbjct: 21 KEGDKYKLSKKELKELLQTELSGFLDAQKDADAVDKVMKELDEDGDGEVDF 71
>pdb|1OE9|B Chain B, Crystal Structure Of Myosin V Motor With Essential Light
Chain - Nucleotide-Free
pdb|1W7I|B Chain B, Crystal Structure Of Myosin V Motor Without Nucleotide
Soaked In 10 Mm Mgadp
pdb|1W7J|B Chain B, Crystal Structure Of Myosin V Motor With Essential Light
Chain + Adp-Befx - Near Rigor
Length = 151
Score = 32.0 bits (71), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 62 EAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDFDVLTR 118
E F ++D+EGNG + LR +++ L + EE+ E + D +G I+++ +
Sbjct: 91 EGFRVFDKEGNGKVMGAELRHVLTTLGEKMTEEEV-ETVLAGHEDSNGCINYEAFLK 146
Score = 31.6 bits (70), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 61/136 (44%), Gaps = 26/136 (19%)
Query: 60 LREAFMLYDREGNGYI----TTDVLR---------EIISEL-DPN--------LDYEELN 97
+EAF L+DR G+G I DV+R E++ L +P +D+E
Sbjct: 12 FKEAFELFDRVGDGKILYSQCGDVMRALGQNPTNAEVLKVLGNPKSDELKSRRVDFETFL 71
Query: 98 EMIEEIDSD-GSGTIDFDVLTRAFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEII 156
M++ + + G GT ++ F FD+E G + + ++ LG ++E + E +
Sbjct: 72 PMLQAVAKNRGQGT--YEDYLEGFRVFDKEGNGKVMGAELRHVLTTLGEKMTEEEV-ETV 128
Query: 157 KEVDEDGSGELEFNEF 172
ED +G + + F
Sbjct: 129 LAGHEDSNGCINYEAF 144
>pdb|2E30|A Chain A, Solution Structure Of The Cytoplasmic Region Of Na+H+
Exchanger 1 Complexed With Essential Cofactor
Calcineurin B Homologous Protein 1
Length = 195
Score = 32.0 bits (71), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 5/74 (6%)
Query: 63 AFMLYDREGNGYITTDVLREIISEL-DPNLDYEEL----NEMIEEIDSDGSGTIDFDVLT 117
AF LYD + + I+ D L +++ + N+ E+L + I+E D DG I F
Sbjct: 118 AFRLYDLDKDEKISRDELLQVLRMMVGVNISDEQLGSIADRTIQEADQDGDSAISFTEFV 177
Query: 118 RAFEAFDQEKKGSI 131
+ E D E+K SI
Sbjct: 178 KVLEKVDVEQKMSI 191
Score = 28.1 bits (61), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 5/62 (8%)
Query: 119 AFEAFDQEKKGSIPTDMVGTIMEML-GHPQSQEALNEI----IKEVDEDGSGELEFNEFC 173
AF +D +K I D + ++ M+ G S E L I I+E D+DG + F EF
Sbjct: 118 AFRLYDLDKDEKISRDELLQVLRMMVGVNISDEQLGSIADRTIQEADQDGDSAISFTEFV 177
Query: 174 TL 175
+
Sbjct: 178 KV 179
>pdb|1K2H|A Chain A, Three-Dimensional Solution Structure Of Apo-S100a1.
pdb|1K2H|B Chain B, Three-Dimensional Solution Structure Of Apo-S100a1.
pdb|1ZFS|A Chain A, Solution Structure Of S100a1 Bound To Calcium
pdb|1ZFS|B Chain B, Solution Structure Of S100a1 Bound To Calcium
pdb|2K2F|A Chain A, Solution Structure Of Ca2+-S100a1-Ryrp12
pdb|2K2F|B Chain B, Solution Structure Of Ca2+-S100a1-Ryrp12
pdb|2KBM|A Chain A, Ca-S100a1 Interacting With Trtk12
pdb|2KBM|B Chain B, Ca-S100a1 Interacting With Trtk12
Length = 93
Score = 32.0 bits (71), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 23/29 (79%)
Query: 13 QSQEALNEIIKEVDEDGSGELEFNEFCTL 41
+ +A+++I+KE+DE+G GE++F EF L
Sbjct: 49 KDADAVDKIMKELDENGDGEVDFQEFVVL 77
Score = 32.0 bits (71), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 23/29 (79%)
Query: 147 QSQEALNEIIKEVDEDGSGELEFNEFCTL 175
+ +A+++I+KE+DE+G GE++F EF L
Sbjct: 49 KDADAVDKIMKELDENGDGEVDFQEFVVL 77
>pdb|1JUO|A Chain A, Crystal Structure Of Calcium-Free Human Sorcin: A Member
Of The Penta-Ef-Hand Protein Family
pdb|1JUO|B Chain B, Crystal Structure Of Calcium-Free Human Sorcin: A Member
Of The Penta-Ef-Hand Protein Family
Length = 198
Score = 31.6 bits (70), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 27/116 (23%), Positives = 54/116 (46%), Gaps = 17/116 (14%)
Query: 72 NGYITTDVLREIISELDPNLDYEELNE-----MIEEIDSDGSGTIDFD-------VLT-- 117
+G I D L+ +++ Y+ N M+ +D D SGT+ F+ VL
Sbjct: 46 DGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELWAVLNGW 105
Query: 118 -RAFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEF 172
+ F +FD ++ G++ + + +G S +A+N I K + G++ F+++
Sbjct: 106 RQHFISFDTDRSGTVDPQELQKALTTMGFRLSPQAVNSIAKRYSTN--GKITFDDY 159
Score = 31.2 bits (69), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 26/128 (20%), Positives = 52/128 (40%), Gaps = 20/128 (15%)
Query: 12 PQSQEALNEIIKEVDEDGSGELEFNEFCTLXXXXXXXXXXXXXXXXXXLREAFMLYDREG 71
P + E ++ +D D SG + FNEF L R+ F+ +D +
Sbjct: 69 PFNLETCRLMVSMLDRDMSGTMGFNEFKEL------------WAVLNGWRQHFISFDTDR 116
Query: 72 NGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTID--------FDVLTRAFEAF 123
+G + L++ ++ + L + +N + + ++G T D LT +F
Sbjct: 117 SGTVDPQELQKALTTMGFRLSPQAVNSIAKRYSTNGKITFDDYIACCVKLRALTDSFRRR 176
Query: 124 DQEKKGSI 131
D ++G +
Sbjct: 177 DTAQQGVV 184
>pdb|1JF0|A Chain A, The Crystal Structure Of Obelin From Obelia Geniculata At
1.82 A Resolution
Length = 195
Score = 31.6 bits (70), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 4/62 (6%)
Query: 64 FMLYDREGNGYITTDVLREI--ISELDPNLDYEELNEMIEEIDSDGSGTIDFDVLTRAFE 121
F ++D++G+G IT D + IS + P+ E+ + + D D SG +D D +TR
Sbjct: 119 FDIFDKDGSGTITLDEWKAYGRISGISPS--EEDCEKTFQHCDLDNSGELDVDEMTRQHL 176
Query: 122 AF 123
F
Sbjct: 177 GF 178
Score = 28.1 bits (61), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 26/52 (50%)
Query: 120 FEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNE 171
F+ FD++ G+I D + G S+E + + D D SGEL+ +E
Sbjct: 119 FDIFDKDGSGTITLDEWKAYGRISGISPSEEDCEKTFQHCDLDNSGELDVDE 170
>pdb|3KPX|A Chain A, Crystal Structure Analysis Of Photoprotein Clytin
Length = 198
Score = 31.2 bits (69), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 50/118 (42%), Gaps = 9/118 (7%)
Query: 13 QSQEALNEIIKEVDEDGSGELEFNEFCT----LXXXXXXXXXXXXXXXXXXLREA-FMLY 67
+ QEA+ K++ D E+EF F L EA F ++
Sbjct: 66 RHQEAVEAFFKKIGLDYGKEVEFPAFVNGWKELAKHDLKLWSQNKKSLIRNWGEAVFDIF 125
Query: 68 DREGNGYITTDVLREI--ISELDPNLDYEELNEMIEEIDSDGSGTIDFDVLTRAFEAF 123
D++G+G I+ D + IS + P+ E+ + + D D SG +D D +TR F
Sbjct: 126 DKDGSGSISLDEWKTYGGISGICPSD--EDAEKTFKHCDLDNSGKLDVDEMTRQHLGF 181
Score = 28.9 bits (63), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 26/52 (50%)
Query: 120 FEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNE 171
F+ FD++ GSI D T + G S E + K D D SG+L+ +E
Sbjct: 122 FDIFDKDGSGSISLDEWKTYGGISGICPSDEDAEKTFKHCDLDNSGKLDVDE 173
>pdb|1GJY|A Chain A, The X-Ray Structure Of The Sorcin Calcium Binding Domain
(Scbd) Provides Insight Into The Phosphorylation And
Calcium Dependent Processess
pdb|1GJY|B Chain B, The X-Ray Structure Of The Sorcin Calcium Binding Domain
(Scbd) Provides Insight Into The Phosphorylation And
Calcium Dependent Processess
pdb|1GJY|C Chain C, The X-Ray Structure Of The Sorcin Calcium Binding Domain
(Scbd) Provides Insight Into The Phosphorylation And
Calcium Dependent Processess
pdb|1GJY|D Chain D, The X-Ray Structure Of The Sorcin Calcium Binding Domain
(Scbd) Provides Insight Into The Phosphorylation And
Calcium Dependent Processess
Length = 167
Score = 31.2 bits (69), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 26/129 (20%), Positives = 52/129 (40%), Gaps = 20/129 (15%)
Query: 11 HPQSQEALNEIIKEVDEDGSGELEFNEFCTLXXXXXXXXXXXXXXXXXXLREAFMLYDRE 70
P + E ++ +D D SG + FNEF L R+ F+ +D +
Sbjct: 37 KPFNLETCRLMVSMLDRDMSGTMGFNEFKEL------------WAVLNGWRQHFISFDSD 84
Query: 71 GNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTID--------FDVLTRAFEA 122
+G + L++ ++ + L+ + +N + + + G T D LT +F
Sbjct: 85 RSGTVDPQELQKALTTMGFRLNPQTVNSIAKRYSTSGKITFDDYIACCVKLRALTDSFRR 144
Query: 123 FDQEKKGSI 131
D ++G +
Sbjct: 145 RDSAQQGMV 153
>pdb|2F8P|A Chain A, Crystal Structure Of Obelin Following Ca2+ Triggered
Bioluminescence Suggests Neutral Coelenteramide As The
Primary Excited State
Length = 195
Score = 31.2 bits (69), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 4/62 (6%)
Query: 64 FMLYDREGNGYITTDVLREI--ISELDPNLDYEELNEMIEEIDSDGSGTIDFDVLTRAFE 121
F ++D++G+G IT D + IS + P+ E+ D D SG +D D +TR
Sbjct: 119 FDIFDKDGSGTITLDEWKAYGKISGISPS--QEDCEATFRHCDLDNSGDLDVDEMTRQHL 176
Query: 122 AF 123
F
Sbjct: 177 GF 178
Score = 29.3 bits (64), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 26/52 (50%)
Query: 120 FEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNE 171
F+ FD++ G+I D ++ G SQE + D D SG+L+ +E
Sbjct: 119 FDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDNSGDLDVDE 170
>pdb|1EL4|A Chain A, Structure Of The Calcium-Regulated Photoprotein Obelin
Determined By Sulfur Sas
Length = 195
Score = 31.2 bits (69), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 4/62 (6%)
Query: 64 FMLYDREGNGYITTDVLREI--ISELDPNLDYEELNEMIEEIDSDGSGTIDFDVLTRAFE 121
F ++D++G+G IT D + IS + P+ E+ D D SG +D D +TR
Sbjct: 119 FDIFDKDGSGTITLDEWKAYGKISGISPS--QEDCEATFRHCDLDNSGDLDVDEMTRQHL 176
Query: 122 AF 123
F
Sbjct: 177 GF 178
Score = 29.3 bits (64), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 26/52 (50%)
Query: 120 FEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNE 171
F+ FD++ G+I D ++ G SQE + D D SG+L+ +E
Sbjct: 119 FDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDNSGDLDVDE 170
>pdb|1JF2|A Chain A, Crystal Structure Of W92f Obelin Mutant From Obelia
Longissima At 1.72 Angstrom Resolution
pdb|1S36|A Chain A, Crystal Structure Of A Ca2+-Discharged Photoprotein:
Implications For The Mechanisms Of The Calcium Trigger
And The Bioluminescence
Length = 195
Score = 31.2 bits (69), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 4/62 (6%)
Query: 64 FMLYDREGNGYITTDVLREI--ISELDPNLDYEELNEMIEEIDSDGSGTIDFDVLTRAFE 121
F ++D++G+G IT D + IS + P+ E+ D D SG +D D +TR
Sbjct: 119 FDIFDKDGSGTITLDEWKAYGKISGISPS--QEDCEATFRHCDLDNSGDLDVDEMTRQHL 176
Query: 122 AF 123
F
Sbjct: 177 GF 178
Score = 28.9 bits (63), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 26/52 (50%)
Query: 120 FEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNE 171
F+ FD++ G+I D ++ G SQE + D D SG+L+ +E
Sbjct: 119 FDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDNSGDLDVDE 170
>pdb|3J04|C Chain C, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
pdb|3J04|F Chain F, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
Length = 148
Score = 31.2 bits (69), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 15/57 (26%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 62 EAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDFDVLTR 118
E ++D+EGNG + +R ++ L + EE+ +++ D +G I+++ L R
Sbjct: 88 EGLRVFDKEGNGTVMGAEIRHVLVTLGEKMTEEEVEQLVAG-HEDSNGCINYEELVR 143
Score = 30.0 bits (66), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 27/138 (19%), Positives = 55/138 (39%), Gaps = 24/138 (17%)
Query: 60 LREAFMLYDREGNGYITTDVLREIISELDPN----------------------LDYEELN 97
+EAF L+DR G+G I +++ L N L +E+
Sbjct: 9 FKEAFQLFDRTGDGKILYSQCGDVMRALGQNPTNAEVMKVLGNPKSDEMNLKTLKFEQFL 68
Query: 98 EMIEEIDSDGSGTIDFDVLTRAFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIK 157
M++ I + F+ FD+E G++ + ++ LG ++E + +++
Sbjct: 69 PMMQTIAKNKDQGC-FEDYVEGLRVFDKEGNGTVMGAEIRHVLVTLGEKMTEEEVEQLVA 127
Query: 158 EVDEDGSGELEFNEFCTL 175
ED +G + + E +
Sbjct: 128 G-HEDSNGCINYEELVRM 144
>pdb|1QX2|A Chain A, X-Ray Structure Of Calcium-Loaded Calbindomodulin (A
Calbindin D9k Re- Engineered To Undergo A Conformational
Opening) At 1.44 A Resolution
pdb|1QX2|B Chain B, X-Ray Structure Of Calcium-Loaded Calbindomodulin (A
Calbindin D9k Re- Engineered To Undergo A Conformational
Opening) At 1.44 A Resolution
Length = 76
Score = 31.2 bits (69), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 34/61 (55%), Gaps = 4/61 (6%)
Query: 119 AFEAFDQEK--KGSIPTDMVGTIMEMLGHP--QSQEALNEIIKEVDEDGSGELEFNEFCT 174
AFE F ++ I + + +M+ LG + L+E+I+EVD++G GE+ F EF
Sbjct: 10 AFEVFAAKEGDPNQISKEELKLVMQTLGPSLLKGMSTLDEMIEEVDKNGDGEVSFEEFLV 69
Query: 175 L 175
+
Sbjct: 70 M 70
Score = 30.4 bits (67), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 36/59 (61%), Gaps = 4/59 (6%)
Query: 60 LREAFMLYD-REGN-GYITTDVLREIISELDPNL--DYEELNEMIEEIDSDGSGTIDFD 114
++ AF ++ +EG+ I+ + L+ ++ L P+L L+EMIEE+D +G G + F+
Sbjct: 7 IKGAFEVFAAKEGDPNQISKEELKLVMQTLGPSLLKGMSTLDEMIEEVDKNGDGEVSFE 65
Score = 30.0 bits (66), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 25/39 (64%), Gaps = 2/39 (5%)
Query: 5 IMEMLGHP--QSQEALNEIIKEVDEDGSGELEFNEFCTL 41
+M+ LG + L+E+I+EVD++G GE+ F EF +
Sbjct: 32 VMQTLGPSLLKGMSTLDEMIEEVDKNGDGEVSFEEFLVM 70
>pdb|1BR1|B Chain B, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|D Chain D, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|F Chain F, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|H Chain H, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR4|B Chain B, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|D Chain D, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|F Chain F, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|H Chain H, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1I84|T Chain T, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment.
pdb|1I84|W Chain W, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment.
pdb|3DTP|C Chain C, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
pdb|3DTP|D Chain D, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
Length = 150
Score = 31.2 bits (69), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 15/57 (26%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 62 EAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDFDVLTR 118
E ++D+EGNG + +R ++ L + EE+ +++ D +G I+++ L R
Sbjct: 90 EGLRVFDKEGNGTVMGAEIRHVLVTLGEKMTEEEVEQLVAG-HEDSNGCINYEELVR 145
Score = 30.4 bits (67), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 27/135 (20%), Positives = 54/135 (40%), Gaps = 24/135 (17%)
Query: 60 LREAFMLYDREGNGYITTDVLREIISELDPN----------------------LDYEELN 97
+EAF L+DR G+G I +++ L N L +E+
Sbjct: 11 FKEAFQLFDRTGDGKILYSQCGDVMRALGQNPTNAEVMKVLGNPKSDEMNLKTLKFEQFL 70
Query: 98 EMIEEIDSDGSGTIDFDVLTRAFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIK 157
M++ I + F+ FD+E G++ + ++ LG ++E + +++
Sbjct: 71 PMMQTIAKNKDQGC-FEDYVEGLRVFDKEGNGTVMGAEIRHVLVTLGEKMTEEEVEQLVA 129
Query: 158 EVDEDGSGELEFNEF 172
ED +G + + E
Sbjct: 130 G-HEDSNGCINYEEL 143
>pdb|2KDH|A Chain A, The Solution Structure Of Human Cardiac Troponin C In
Complex With The Green Tea Polyphenol; (-)-
Epigallocatechin-3-Gallate
pdb|2L98|A Chain A, Structure Of Trans-Resveratrol In Complex With The Cardiac
Regulatory Protein Troponin C
Length = 72
Score = 31.2 bits (69), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 14/55 (25%), Positives = 32/55 (58%)
Query: 60 LREAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDFD 114
L + F ++D+ +GYI D L+ ++ + +++ E++++ D + G ID+D
Sbjct: 8 LSDLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYD 62
>pdb|1G8I|A Chain A, Crystal Structure Of Human Frequenin (Neuronal Calcium
Sensor 1)
pdb|1G8I|B Chain B, Crystal Structure Of Human Frequenin (Neuronal Calcium
Sensor 1)
pdb|2LCP|A Chain A, Nmr Structure Of Calcium Loaded, Un-Myristoylated Human
Ncs-1
Length = 190
Score = 31.2 bits (69), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 6/59 (10%)
Query: 26 DEDGSGELEFNEFCTLXXXXXXXXXXXXXXXXXXLREAFMLYDREGNGYITTDVLREII 84
DE+ G +EF+EF LR AF LYD + +GYIT + + +I+
Sbjct: 73 DENKDGRIEFSEFI------QALSVTSRGTLDEKLRWAFKLYDLDNDGYITRNEMLDIV 125
>pdb|2NXQ|A Chain A, Crystal Structure Of Calcium Binding Protein 1 From
Entamoeba Histolytica: A Novel Arrangement Of Ef Hand
Motifs
pdb|2NXQ|B Chain B, Crystal Structure Of Calcium Binding Protein 1 From
Entamoeba Histolytica: A Novel Arrangement Of Ef Hand
Motifs
pdb|3PX1|A Chain A, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Strontium
pdb|3PX1|B Chain B, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Strontium
pdb|3QJK|A Chain A, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Lead
pdb|3QJK|B Chain B, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Lead
pdb|3ULG|A Chain A, Crystal Structure Of Calcium-Binding Protein-1 From
Entamoeba Histolytica In Complex With Barium
pdb|3ULG|B Chain B, Crystal Structure Of Calcium-Binding Protein-1 From
Entamoeba Histolytica In Complex With Barium
Length = 134
Score = 30.8 bits (68), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 46/99 (46%), Gaps = 7/99 (7%)
Query: 13 QSQEALNEIIKEVDEDGSGELEFNEFCTLXXXXXXXXXXXXXXXXXXLREAFMLYDREGN 72
++++ L I K +D DG+GE++ NEF L+ + L D +G+
Sbjct: 33 KNEQLLQLIFKSIDADGNGEIDQNEFAKF---YGSIQGQDLSDDKIGLKVLYKLMDVDGD 89
Query: 73 GYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTI 111
G +T +E ++ E++ E + + D++G G I
Sbjct: 90 GKLT----KEEVTSFFKKHGIEKVAEQVMKADANGDGYI 124
Score = 28.9 bits (63), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 15/56 (26%), Positives = 28/56 (50%)
Query: 120 FEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTL 175
F+ D G++ + V + ++++ L I K +D DG+GE++ NEF
Sbjct: 6 FKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKF 61
>pdb|1JFJ|A Chain A, Nmr Solution Structure Of An Ef-Hand Calcium Binding
Protein From Entamoeba Histolytica
pdb|1JFK|A Chain A, Minimum Energy Representative Structure Of A Calcium Bound
Ef-hand Protein From Entamoeba Histolytica
Length = 134
Score = 30.8 bits (68), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 46/99 (46%), Gaps = 7/99 (7%)
Query: 13 QSQEALNEIIKEVDEDGSGELEFNEFCTLXXXXXXXXXXXXXXXXXXLREAFMLYDREGN 72
++++ L I K +D DG+GE++ NEF L+ + L D +G+
Sbjct: 33 KNEQLLQLIFKSIDADGNGEIDQNEFAKF---YGSIQGQDLSDDKIGLKVLYKLMDVDGD 89
Query: 73 GYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTI 111
G +T +E ++ E++ E + + D++G G I
Sbjct: 90 GKLT----KEEVTSFFKKHGIEKVAEQVMKADANGDGYI 124
Score = 28.9 bits (63), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 15/56 (26%), Positives = 28/56 (50%)
Query: 120 FEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTL 175
F+ D G++ + V + ++++ L I K +D DG+GE++ NEF
Sbjct: 6 FKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKF 61
>pdb|1SL7|A Chain A, Crystal Structure Of Calcium-Loaded Apo-Obelin From Obelia
Longissima
Length = 195
Score = 30.8 bits (68), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 4/62 (6%)
Query: 64 FMLYDREGNGYITTDVLREI--ISELDPNLDYEELNEMIEEIDSDGSGTIDFDVLTRAFE 121
F ++D++G+G IT D + IS + P+ E+ D D SG +D D +TR
Sbjct: 119 FDIFDKDGSGTITLDEWKAYGKISGISPS--QEDCEATFRHCDLDDSGDLDVDEMTRQHL 176
Query: 122 AF 123
F
Sbjct: 177 GF 178
Score = 28.5 bits (62), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 26/52 (50%)
Query: 120 FEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNE 171
F+ FD++ G+I D ++ G SQE + D D SG+L+ +E
Sbjct: 119 FDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDDSGDLDVDE 170
>pdb|1FPW|A Chain A, Structure Of Yeast Frequenin
pdb|2JU0|A Chain A, Structure Of Yeast Frequenin Bound To Pdtins 4-Kinase
Length = 190
Score = 30.4 bits (67), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 34/79 (43%), Gaps = 8/79 (10%)
Query: 9 LGHPQSQEALNEIIKEVDEDGSGELEFNEFCTLXXXXXXXXXXXXXXXXXXLREAFMLYD 68
G P+ + N + D+D +G + F EF T+ L AF LYD
Sbjct: 58 FGSPE--DFANHLFTVFDKDNNGFIHFEEFITVLSTTSRGTLEEK------LSWAFELYD 109
Query: 69 REGNGYITTDVLREIISEL 87
+GYIT D + I++ +
Sbjct: 110 LNHDGYITFDEMLTIVASV 128
Score = 28.5 bits (62), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 52/124 (41%), Gaps = 38/124 (30%)
Query: 64 FMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDFDVLTRAFEAF 123
F ++D++ NG+I E I + + GT++ + L+ AFE +
Sbjct: 69 FTVFDKDNNGFI-------------------HFEEFITVLSTTSRGTLE-EKLSWAFELY 108
Query: 124 DQEKKGSIPTD----MVGTIMEMLGHPQSQEALNE-----------IIKEVDEDGSGELE 168
D G I D +V ++ +M+G S LNE I K +D++ G +
Sbjct: 109 DLNHDGYITFDEMLTIVASVYKMMG---SMVTLNEDEATPEMRVKKIFKLMDKNEDGYIT 165
Query: 169 FNEF 172
+EF
Sbjct: 166 LDEF 169
>pdb|2LLS|A Chain A, Solution Structure Of Human Apo-S100a1 C85m
pdb|2LLS|B Chain B, Solution Structure Of Human Apo-S100a1 C85m
Length = 93
Score = 30.4 bits (67), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 22/26 (84%)
Query: 16 EALNEIIKEVDEDGSGELEFNEFCTL 41
+A+++++KE+DE+G GE++F E+ L
Sbjct: 52 DAVDKVMKELDENGDGEVDFQEYVVL 77
Score = 30.4 bits (67), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 22/26 (84%)
Query: 150 EALNEIIKEVDEDGSGELEFNEFCTL 175
+A+++++KE+DE+G GE++F E+ L
Sbjct: 52 DAVDKVMKELDENGDGEVDFQEYVVL 77
>pdb|2LLT|A Chain A, Post-Translational S-Nitrosylation Is An Endogenous
Factor Fine-Tuning Human S100a1 Protein Properties
pdb|2LLT|B Chain B, Post-Translational S-Nitrosylation Is An Endogenous
Factor Fine-Tuning Human S100a1 Protein Properties
Length = 93
Score = 30.4 bits (67), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 22/26 (84%)
Query: 16 EALNEIIKEVDEDGSGELEFNEFCTL 41
+A+++++KE+DE+G GE++F E+ L
Sbjct: 52 DAVDKVMKELDENGDGEVDFQEYVVL 77
Score = 30.4 bits (67), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 22/26 (84%)
Query: 150 EALNEIIKEVDEDGSGELEFNEFCTL 175
+A+++++KE+DE+G GE++F E+ L
Sbjct: 52 DAVDKVMKELDENGDGEVDFQEYVVL 77
>pdb|1QV0|A Chain A, Atomic Resolution Structure Of Obelin From Obelia
Longissima
pdb|1QV1|A Chain A, Atomic Resolution Structure Of Obelin From Obelia
Longissima
pdb|1SL9|A Chain A, Obelin From Obelia Longissima
Length = 195
Score = 30.0 bits (66), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 4/62 (6%)
Query: 64 FMLYDREGNGYITTDVLREI--ISELDPNLDYEELNEMIEEIDSDGSGTIDFDVLTRAFE 121
F ++D++G+G IT D + IS + P+ E+ D D +G +D D +TR
Sbjct: 119 FDIFDKDGSGTITLDEWKAYGKISGISPS--QEDCEATFRHCDLDNAGDLDVDEMTRQHL 176
Query: 122 AF 123
F
Sbjct: 177 GF 178
Score = 28.1 bits (61), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 26/52 (50%)
Query: 120 FEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNE 171
F+ FD++ G+I D ++ G SQE + D D +G+L+ +E
Sbjct: 119 FDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDNAGDLDVDE 170
>pdb|2LHL|A Chain A, Chemical Shift Assignments And Solution Structure Of
Human Apo-S100a1 E32q Mutant
pdb|2LHL|B Chain B, Chemical Shift Assignments And Solution Structure Of
Human Apo-S100a1 E32q Mutant
Length = 93
Score = 30.0 bits (66), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 22/26 (84%)
Query: 16 EALNEIIKEVDEDGSGELEFNEFCTL 41
+A+++++KE+DE+G GE++F E+ L
Sbjct: 52 DAVDKVMKELDENGDGEVDFQEYVVL 77
Score = 30.0 bits (66), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 22/26 (84%)
Query: 150 EALNEIIKEVDEDGSGELEFNEFCTL 175
+A+++++KE+DE+G GE++F E+ L
Sbjct: 52 DAVDKVMKELDENGDGEVDFQEYVVL 77
Score = 27.3 bits (59), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 14/51 (27%), Positives = 31/51 (60%), Gaps = 6/51 (11%)
Query: 69 REGNGY-ITTDVLREIISE-----LDPNLDYEELNEMIEEIDSDGSGTIDF 113
+EG+ Y ++ L+E++ LD D + ++++++E+D +G G +DF
Sbjct: 21 KEGDKYKLSKKQLKELLQTELSGFLDAQKDVDAVDKVMKELDENGDGEVDF 71
>pdb|2L0P|A Chain A, Solution Structure Of Human Apo-S100a1 Protein By Nmr
Spectroscopy
pdb|2L0P|B Chain B, Solution Structure Of Human Apo-S100a1 Protein By Nmr
Spectroscopy
Length = 94
Score = 30.0 bits (66), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 22/26 (84%)
Query: 16 EALNEIIKEVDEDGSGELEFNEFCTL 41
+A+++++KE+DE+G GE++F E+ L
Sbjct: 53 DAVDKVMKELDENGDGEVDFQEYVVL 78
Score = 30.0 bits (66), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 22/26 (84%)
Query: 150 EALNEIIKEVDEDGSGELEFNEFCTL 175
+A+++++KE+DE+G GE++F E+ L
Sbjct: 53 DAVDKVMKELDENGDGEVDFQEYVVL 78
Score = 26.6 bits (57), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 14/51 (27%), Positives = 31/51 (60%), Gaps = 6/51 (11%)
Query: 69 REGNGY-ITTDVLREIISE-----LDPNLDYEELNEMIEEIDSDGSGTIDF 113
+EG+ Y ++ L+E++ LD D + ++++++E+D +G G +DF
Sbjct: 22 KEGDKYKLSKKELKELLQTELSGFLDAQKDVDAVDKVMKELDENGDGEVDF 72
>pdb|2LLU|A Chain A, Post-Translational S-Nitrosylation Is An Endogenous
Factor Fine-Tuning Human S100a1 Protein Properties
pdb|2LLU|B Chain B, Post-Translational S-Nitrosylation Is An Endogenous
Factor Fine-Tuning Human S100a1 Protein Properties
pdb|2LP2|A Chain A, Solution Structure And Dynamics Of Human S100a1 Protein
Modified At Cysteine 85 With Homocysteine Disulfide
Bond Formation In Calcium Saturated Form
pdb|2LP2|B Chain B, Solution Structure And Dynamics Of Human S100a1 Protein
Modified At Cysteine 85 With Homocysteine Disulfide
Bond Formation In Calcium Saturated Form
pdb|2LP3|A Chain A, Solution Structure Of S100a1 Ca2+
pdb|2LP3|B Chain B, Solution Structure Of S100a1 Ca2+
Length = 93
Score = 30.0 bits (66), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 22/26 (84%)
Query: 16 EALNEIIKEVDEDGSGELEFNEFCTL 41
+A+++++KE+DE+G GE++F E+ L
Sbjct: 52 DAVDKVMKELDENGDGEVDFQEYVVL 77
Score = 30.0 bits (66), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 22/26 (84%)
Query: 150 EALNEIIKEVDEDGSGELEFNEFCTL 175
+A+++++KE+DE+G GE++F E+ L
Sbjct: 52 DAVDKVMKELDENGDGEVDFQEYVVL 77
Score = 26.6 bits (57), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 14/51 (27%), Positives = 31/51 (60%), Gaps = 6/51 (11%)
Query: 69 REGNGY-ITTDVLREIISE-----LDPNLDYEELNEMIEEIDSDGSGTIDF 113
+EG+ Y ++ L+E++ LD D + ++++++E+D +G G +DF
Sbjct: 21 KEGDKYKLSKKELKELLQTELSGFLDAQKDVDAVDKVMKELDENGDGEVDF 71
>pdb|3CS1|A Chain A, Flagellar Calcium-binding Protein (fcabp) From T. Cruzi
Length = 219
Score = 30.0 bits (66), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 40/84 (47%), Gaps = 19/84 (22%)
Query: 92 DYEELNEMIEEIDSDGSGTIDFDVLTRAFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEA 151
D+ EL M +EID+ G+ +D ++E K ++P +E G A
Sbjct: 128 DFFELTVMFDEIDASGNMLVD-----------EEEFKRAVPK------LEAWGAKVEDPA 170
Query: 152 LNEIIKEVDEDGSGELEFNEFCTL 175
+ KE+D++G+G + F+EF
Sbjct: 171 A--LFKELDKNGTGSVTFDEFAAW 192
>pdb|2K7B|A Chain A, Nmr Structure Of Mg2+-Bound Cabp1 N-Domain
Length = 76
Score = 30.0 bits (66), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 30/55 (54%)
Query: 60 LREAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDFD 114
LREAF +D++ +GYI L + + EL E+ ++I+ + G +DFD
Sbjct: 12 LREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFD 66
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 29.6 bits (65), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 37/105 (35%), Gaps = 22/105 (20%)
Query: 68 DREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDFDVLTRAFEAFDQEK 127
D + NGYI + + L E L DSD SG I L F D +
Sbjct: 392 DFDKNGYIEYSEFVTVAXDRKTLLSRERLERAFRXFDSDNSGKISSTELATIFGVSDVD- 450
Query: 128 KGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEF 172
E ++ EVD++ GE++F+EF
Sbjct: 451 ---------------------SETWKSVLSEVDKNNDGEVDFDEF 474
>pdb|1G33|A Chain A, Crystal Structure Of Rat Parvalbumin Without The
N-Terminal Domain
Length = 73
Score = 29.6 bits (65), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
Query: 114 DVLTRAFEAFDQEKKGSIPTDMVGTIMEMLGHPQ---SQEALNEIIKEVDEDGSGELEFN 170
D + + F D++K G I D +G+I++ S + ++ D+DG G++
Sbjct: 5 DDVKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIGVE 64
Query: 171 EFCTL 175
EF TL
Sbjct: 65 EFSTL 69
>pdb|2JC2|A Chain A, The Crystal Structure Of The Natural F112l Human Sorcin
Mutant
pdb|2JC2|B Chain B, The Crystal Structure Of The Natural F112l Human Sorcin
Mutant
pdb|2JC2|C Chain C, The Crystal Structure Of The Natural F112l Human Sorcin
Mutant
pdb|2JC2|D Chain D, The Crystal Structure Of The Natural F112l Human Sorcin
Mutant
Length = 198
Score = 29.3 bits (64), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/128 (20%), Positives = 51/128 (39%), Gaps = 20/128 (15%)
Query: 12 PQSQEALNEIIKEVDEDGSGELEFNEFCTLXXXXXXXXXXXXXXXXXXLREAFMLYDREG 71
P + E ++ +D D SG + FNEF L R+ F+ D +
Sbjct: 69 PFNLETCRLMVSMLDRDMSGTMGFNEFKEL------------WAVLNGWRQHFISLDTDR 116
Query: 72 NGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTID--------FDVLTRAFEAF 123
+G + L++ ++ + L + +N + + ++G T D LT +F
Sbjct: 117 SGTVDPQELQKALTTMGFRLSPQAVNSIAKRYSTNGKITFDDYIACCVKLRALTDSFRRR 176
Query: 124 DQEKKGSI 131
D ++G +
Sbjct: 177 DTAQQGVV 184
>pdb|3F45|A Chain A, Structure Of The R75a Mutant Of Rat Alpha-Parvalbumin
Length = 109
Score = 29.3 bits (64), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 33/65 (50%), Gaps = 3/65 (4%)
Query: 114 DVLTRAFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNE---IIKEVDEDGSGELEFN 170
D + + F D++K G I D +G+I++ + + E ++ D+DG G++
Sbjct: 41 DDVKKVFHILDKDKSGFIEEDELGSILKGFSSDAADLSAKETKTLMAAGDKDGDGKIGVE 100
Query: 171 EFCTL 175
EF TL
Sbjct: 101 EFSTL 105
>pdb|1FI5|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac Troponin
C Bound To The N Terminal Domain Of Cardiac Troponin I.
pdb|1SBJ|A Chain A, Nmr Structure Of The Mg2+-Loaded C Terminal Domain Of
Cardiac Troponin C Bound To The N Terminal Domain Of
Cardiac Troponin I
pdb|1SCV|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac Troponin
C Bound To The N Terminal Domain Of Cardiac Troponin I
Length = 81
Score = 29.3 bits (64), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 13/55 (23%), Positives = 32/55 (58%)
Query: 60 LREAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDFD 114
L + F ++D+ +GYI + L+ ++ + +++ E++++ D + G ID+D
Sbjct: 17 LSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYD 71
>pdb|1RTP|1 Chain 1, Refined X-ray Structure Of Rat Parvalbumin, A Mammalian
Alpha-lineage Parvalbumin, At 2.0 A Resolution
pdb|1RTP|2 Chain 2, Refined X-ray Structure Of Rat Parvalbumin, A Mammalian
Alpha-lineage Parvalbumin, At 2.0 A Resolution
pdb|1RTP|3 Chain 3, Refined X-ray Structure Of Rat Parvalbumin, A Mammalian
Alpha-lineage Parvalbumin, At 2.0 A Resolution
pdb|1RWY|A Chain A, Crystal Structure Of Rat Alpha-parvalbumin At 1.05
Resolution
pdb|1RWY|B Chain B, Crystal Structure Of Rat Alpha-parvalbumin At 1.05
Resolution
pdb|1RWY|C Chain C, Crystal Structure Of Rat Alpha-parvalbumin At 1.05
Resolution
pdb|2JWW|A Chain A, Calcium-Free Rat Alpha-Parvalbumin
Length = 109
Score = 29.3 bits (64), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
Query: 114 DVLTRAFEAFDQEKKGSIPTDMVGTIMEMLGHPQ---SQEALNEIIKEVDEDGSGELEFN 170
D + + F D++K G I D +G+I++ S + ++ D+DG G++
Sbjct: 41 DDVKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIGVE 100
Query: 171 EFCTL 175
EF TL
Sbjct: 101 EFSTL 105
>pdb|1NYA|A Chain A, Nmr Solution Structure Of Calerythrin, An Ef-hand Calcium-
Binding Protein
Length = 176
Score = 29.3 bits (64), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Query: 124 DQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCT 174
D+ G I D + LG +++ A E +VD +G+GEL +E T
Sbjct: 112 DKNADGQINADEFAAWLTALGMSKAEAA--EAFNQVDTNGNGELSLDELLT 160
>pdb|1OZS|A Chain A, C-Domain Of Human Cardiac Troponin C In Complex With The
Inhibitory Region Of Human Cardiac Troponin I
Length = 73
Score = 29.3 bits (64), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 13/55 (23%), Positives = 32/55 (58%)
Query: 60 LREAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDFD 114
L + F ++D+ +GYI + L+ ++ + +++ E++++ D + G ID+D
Sbjct: 9 LSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYD 63
>pdb|3LI6|A Chain A, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
pdb|3LI6|D Chain D, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
pdb|3LI6|G Chain G, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
pdb|3LI6|J Chain J, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
Length = 66
Score = 29.3 bits (64), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 15/56 (26%), Positives = 28/56 (50%)
Query: 120 FEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEFCTL 175
F+ D G++ + V + ++++ L I K +D DG+GE++ NEF
Sbjct: 6 FKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKF 61
Score = 26.6 bits (57), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 19/29 (65%)
Query: 13 QSQEALNEIIKEVDEDGSGELEFNEFCTL 41
++++ L I K +D DG+GE++ NEF
Sbjct: 33 KNEQLLQLIFKSIDADGNGEIDQNEFAKF 61
>pdb|1KFX|S Chain S, Crystal Structure Of Human M-Calpain Form I
pdb|1KFU|S Chain S, Crystal Structure Of Human M-Calpain Form Ii
Length = 184
Score = 28.9 bits (63), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 20/86 (23%), Positives = 39/86 (45%), Gaps = 11/86 (12%)
Query: 99 MIEEIDSDGSGTIDFD----------VLTRAFEAFDQEKKGSIPTDMVGTIMEMLGHPQS 148
M+ +DSD +G + F+ ++ FD ++ G+I + + E G +
Sbjct: 63 MVAVMDSDTTGKLGFEEFKYLWNNIKRWQAIYKQFDTDRSGTICSSELPGAFEAAGFHLN 122
Query: 149 QEALNEIIKEVDEDGSGELEFNEFCT 174
+ N II+ D SG ++F+ F +
Sbjct: 123 EHLYNMIIRRY-SDESGNMDFDNFIS 147
>pdb|1IH0|A Chain A, Structure Of The C-Domain Of Human Cardiac Troponin C In
Complex With Ca2+ Sensitizer Emd 57033
Length = 71
Score = 28.9 bits (63), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 13/55 (23%), Positives = 32/55 (58%)
Query: 60 LREAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDFD 114
L + F ++D+ +GYI + L+ ++ + +++ E++++ D + G ID+D
Sbjct: 7 LSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYD 61
>pdb|1S3P|A Chain A, Crystal Structure Of Rat Alpha-parvalbumin S55d/e59d
Mutant
Length = 109
Score = 28.9 bits (63), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
Query: 114 DVLTRAFEAFDQEKKGSIPTDMVGTIMEMLGHPQ---SQEALNEIIKEVDEDGSGELEFN 170
D + + F D++K G I D +G+I++ S + ++ D+DG G++
Sbjct: 41 DDVKKVFHILDKDKDGFIDEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIGVE 100
Query: 171 EFCTL 175
EF TL
Sbjct: 101 EFSTL 105
>pdb|2I94|A Chain A, Nmr Structure Of Recoverin Bound To Rhodopsin Kinase
Length = 202
Score = 28.9 bits (63), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 17/67 (25%), Positives = 29/67 (43%), Gaps = 6/67 (8%)
Query: 21 IIKEVDEDGSGELEFNEFCTLXXXXXXXXXXXXXXXXXXLREAFMLYDREGNGYITTDVL 80
+ + D + G L+F E+ L AF LYD +GNG I+ + +
Sbjct: 69 VFRSFDANSDGTLDFKEYVI------ALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNEV 122
Query: 81 REIISEL 87
EI++ +
Sbjct: 123 LEIVTAI 129
>pdb|1JSA|A Chain A, Myristoylated Recoverin With Two Calciums Bound, Nmr, 24
Structures
Length = 201
Score = 28.9 bits (63), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 17/67 (25%), Positives = 29/67 (43%), Gaps = 6/67 (8%)
Query: 21 IIKEVDEDGSGELEFNEFCTLXXXXXXXXXXXXXXXXXXLREAFMLYDREGNGYITTDVL 80
+ + D + G L+F E+ L AF LYD +GNG I+ + +
Sbjct: 68 VFRSFDANSDGTLDFKEYVI------ALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNEV 121
Query: 81 REIISEL 87
EI++ +
Sbjct: 122 LEIVTAI 128
>pdb|3CTN|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 30
Structures
Length = 76
Score = 28.9 bits (63), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 13/55 (23%), Positives = 32/55 (58%)
Query: 60 LREAFMLYDREGNGYITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDFD 114
L + F ++D+ +GYI + L+ ++ + +++ E++++ D + G ID+D
Sbjct: 12 LSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYD 66
>pdb|1OMR|A Chain A, Non-Myristoylated Wild-Type Bovine Recoverin With Calcium
Bound To Ef- Hand 3
pdb|1REC|A Chain A, Three-Dimensional Structure Of Recoverin, A Calcium Sensor
In Vision
pdb|1IKU|A Chain A, Myristoylated Recoverin In The Calcium-Free State, Nmr, 22
Structures
Length = 201
Score = 28.9 bits (63), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 17/67 (25%), Positives = 29/67 (43%), Gaps = 6/67 (8%)
Query: 21 IIKEVDEDGSGELEFNEFCTLXXXXXXXXXXXXXXXXXXLREAFMLYDREGNGYITTDVL 80
+ + D + G L+F E+ L AF LYD +GNG I+ + +
Sbjct: 68 VFRSFDANSDGTLDFKEYVI------ALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNEV 121
Query: 81 REIISEL 87
EI++ +
Sbjct: 122 LEIVTAI 128
>pdb|2HET|A Chain A, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|B Chain B, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|C Chain C, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|D Chain D, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
Length = 189
Score = 28.9 bits (63), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 17/67 (25%), Positives = 29/67 (43%), Gaps = 6/67 (8%)
Query: 21 IIKEVDEDGSGELEFNEFCTLXXXXXXXXXXXXXXXXXXLREAFMLYDREGNGYITTDVL 80
+ + D + G L+F E+ L AF LYD +GNG I+ + +
Sbjct: 68 VFRSFDANSDGTLDFKEYVI------ALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNEV 121
Query: 81 REIISEL 87
EI++ +
Sbjct: 122 LEIVTAI 128
>pdb|2K7O|A Chain A, Ca2+-s100b, Refined With Rdcs
pdb|2K7O|B Chain B, Ca2+-s100b, Refined With Rdcs
Length = 91
Score = 28.5 bits (62), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 26/46 (56%)
Query: 127 KKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEF 172
KK + + + L + QE ++++++ +DEDG GE +F EF
Sbjct: 28 KKSELKELINNELSHFLEEIKEQEVVDKVMETLDEDGDGECDFQEF 73
Score = 28.5 bits (62), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 20/26 (76%)
Query: 13 QSQEALNEIIKEVDEDGSGELEFNEF 38
+ QE ++++++ +DEDG GE +F EF
Sbjct: 48 KEQEVVDKVMETLDEDGDGECDFQEF 73
>pdb|1JBA|A Chain A, Unmyristoylated Gcap-2 With Three Calcium Ions Bound
Length = 204
Score = 28.5 bits (62), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 44/107 (41%), Gaps = 33/107 (30%)
Query: 99 MIEEIDSDGSGTIDF----------------DVLTRAFEAFDQEKKGSIPT----DMVGT 138
M D++G TIDF L F+ +D+++ G I D+V +
Sbjct: 64 MFRAFDTNGDNTIDFLEYVAALNLVLRGTLEHKLKWTFKIYDKDRNGCIDRQELLDIVES 123
Query: 139 I--------MEMLGHPQSQ-----EALNEIIKEVDEDGSGELEFNEF 172
I +E+ Q + E ++ I VDE+G G+L NEF
Sbjct: 124 IYKLKKACSVEVEAEQQGKLLTPEEVVDRIFLLVDENGDGQLSLNEF 170
>pdb|1P9Q|C Chain C, Structure Of A Hypothetical Protein Af0491 From
Archaeoglobus Fulgidus
Length = 256
Score = 28.5 bits (62), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 44/92 (47%), Gaps = 16/92 (17%)
Query: 80 LREIISELDP--NLDYEELNEMI----EEIDSDGSGTIDFDVLTRAFEAFDQEKKGS--- 130
+++I+ L P L +EE+ I E S +F +TR + ++ GS
Sbjct: 168 VKDIVKALKPILPLKFEEMEIAIKIPPEHTGRAISALYNFGGVTRE----EWQRDGSWIC 223
Query: 131 ---IPTDMVGTIMEMLGHPQSQEALNEIIKEV 159
IP+ M G +M++LG EAL ++++ +
Sbjct: 224 VMRIPSGMYGDLMDLLGKVAKGEALTKVLRRI 255
>pdb|1SYM|A Chain A, 3-D Solution Structure Of Reduced Apo-S100b From Rat, Nmr,
20 Structures
pdb|1SYM|B Chain B, 3-D Solution Structure Of Reduced Apo-S100b From Rat, Nmr,
20 Structures
pdb|1QLK|A Chain A, Solution Structure Of Ca(2+)-Loaded Rat S100b (Betabeta)
Nmr, 20 Structures
pdb|1QLK|B Chain B, Solution Structure Of Ca(2+)-Loaded Rat S100b (Betabeta)
Nmr, 20 Structures
pdb|1B4C|A Chain A, Solution Structure Of Rat Apo-S100b Using Dipolar
Couplings
pdb|1B4C|B Chain B, Solution Structure Of Rat Apo-S100b Using Dipolar
Couplings
pdb|1DT7|A Chain A, Solution Structure Of The C-Terminal Negative Regulatory
Domain Of P53 In A Complex With Ca2+-Bound S100b(Bb)
pdb|1DT7|B Chain B, Solution Structure Of The C-Terminal Negative Regulatory
Domain Of P53 In A Complex With Ca2+-Bound S100b(Bb)
pdb|1MWN|A Chain A, Solution Nmr Structure Of S100b Bound To The High-Affinity
Target Peptide Trtk-12
pdb|1MWN|B Chain B, Solution Nmr Structure Of S100b Bound To The High-Affinity
Target Peptide Trtk-12
pdb|1XYD|A Chain A, Nmr Solution Structure Of Rat Zinc-Calcium-S100b, 20
Structures
pdb|1XYD|B Chain B, Nmr Solution Structure Of Rat Zinc-Calcium-S100b, 20
Structures
Length = 92
Score = 28.5 bits (62), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 26/46 (56%)
Query: 127 KKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEF 172
KK + + + L + QE ++++++ +DEDG GE +F EF
Sbjct: 29 KKSELKELINNELSHFLEEIKEQEVVDKVMETLDEDGDGECDFQEF 74
Score = 28.5 bits (62), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 20/26 (76%)
Query: 13 QSQEALNEIIKEVDEDGSGELEFNEF 38
+ QE ++++++ +DEDG GE +F EF
Sbjct: 49 KEQEVVDKVMETLDEDGDGECDFQEF 74
>pdb|1BU3|A Chain A, Refined Crystal Structure Of Calcium-Bound Silver Hake (Pi
4.2) Parvalbumin At 1.65 A
Length = 109
Score = 28.5 bits (62), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Query: 60 LREAFMLYDREGNGYITTDVLR---EIISELDPNLDYEELNEMIEEIDSDGSGTIDFD 114
+++AF + D++ +G+I D L+ ++ S L E ++ DSDG G I D
Sbjct: 44 IKKAFFVIDQDKSGFIEEDELKLFLQVFSAGARALTDAETKAFLKAGDSDGDGAIGVD 101
>pdb|2G9B|A Chain A, Nmr Solution Structure Of Ca2+-Loaded Calbindin D28k
pdb|2F33|A Chain A, Nmr Solution Structure Of Ca2+-Loaded Calbindin D28k
Length = 263
Score = 28.5 bits (62), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 19/26 (73%)
Query: 62 EAFMLYDREGNGYITTDVLREIISEL 87
+AF LYD++GNGYI + L ++ +L
Sbjct: 195 KAFELYDQDGNGYIDENELDALLKDL 220
>pdb|1DVI|A Chain A, Calpain Domain Vi With Calcium Bound
pdb|1DVI|B Chain B, Calpain Domain Vi With Calcium Bound
Length = 184
Score = 28.1 bits (61), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 19/86 (22%), Positives = 40/86 (46%), Gaps = 11/86 (12%)
Query: 99 MIEEIDSDGSGTIDFD----------VLTRAFEAFDQEKKGSIPTDMVGTIMEMLGHPQS 148
M+ +DSD +G + F+ ++ FD ++ G+I ++ + E G +
Sbjct: 63 MVAVMDSDTTGKLGFEEFKYLWNNIKKWQGIYKRFDTDRSGTIGSNELPGAFEAAGFHLN 122
Query: 149 QEALNEIIKEVDEDGSGELEFNEFCT 174
Q + II+ D +G ++F+ F +
Sbjct: 123 QHIYSMIIRRY-SDETGNMDFDNFIS 147
>pdb|1OMV|A Chain A, Non-Myristoylated Bovine Recoverin (E85q Mutant) With
Calcium Bound To Ef-Hand 3
Length = 201
Score = 28.1 bits (61), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 16/67 (23%), Positives = 29/67 (43%), Gaps = 6/67 (8%)
Query: 21 IIKEVDEDGSGELEFNEFCTLXXXXXXXXXXXXXXXXXXLREAFMLYDREGNGYITTDVL 80
+ + D + G L+F ++ L AF LYD +GNG I+ + +
Sbjct: 68 VFRSFDANSDGTLDFKQYVI------ALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNEV 121
Query: 81 REIISEL 87
EI++ +
Sbjct: 122 LEIVTAI 128
>pdb|1LA3|A Chain A, Solution Structure Of Recoverin Mutant, E85q
Length = 201
Score = 28.1 bits (61), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 16/67 (23%), Positives = 29/67 (43%), Gaps = 6/67 (8%)
Query: 21 IIKEVDEDGSGELEFNEFCTLXXXXXXXXXXXXXXXXXXLREAFMLYDREGNGYITTDVL 80
+ + D + G L+F ++ L AF LYD +GNG I+ + +
Sbjct: 68 VFRSFDANSDGTLDFKQYVI------ALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNEV 121
Query: 81 REIISEL 87
EI++ +
Sbjct: 122 LEIVTAI 128
>pdb|1DF0|B Chain B, Crystal Structure Of M-Calpain
pdb|1U5I|B Chain B, Crystal Structure Analysis Of Rat M-Calpain Mutant Lys10
Thr
pdb|3DF0|B Chain B, Calcium-Dependent Complex Between M-Calpain And
Calpastatin
pdb|3BOW|B Chain B, Structure Of M-Calpain In Complex With Calpastatin
Length = 184
Score = 28.1 bits (61), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 19/86 (22%), Positives = 40/86 (46%), Gaps = 11/86 (12%)
Query: 99 MIEEIDSDGSGTIDFDVLTR----------AFEAFDQEKKGSIPTDMVGTIMEMLGHPQS 148
M+ +DSD +G + F+ ++ FD ++ G+I ++ + E G +
Sbjct: 63 MVAVMDSDTTGKLGFEEFKYLWNNIKKWQGIYKRFDTDRSGTIGSNELPGAFEAAGFHLN 122
Query: 149 QEALNEIIKEVDEDGSGELEFNEFCT 174
Q + II+ D +G ++F+ F +
Sbjct: 123 QHIYSMIIRRY-SDETGNMDFDNFIS 147
>pdb|1NP8|A Chain A, 18-K C-Terminally Trunucated Small Subunit Of Calpain
pdb|1NP8|B Chain B, 18-K C-Terminally Trunucated Small Subunit Of Calpain
Length = 159
Score = 28.1 bits (61), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 19/86 (22%), Positives = 40/86 (46%), Gaps = 11/86 (12%)
Query: 99 MIEEIDSDGSGTIDFDVLTR----------AFEAFDQEKKGSIPTDMVGTIMEMLGHPQS 148
M+ +DSD +G + F+ ++ FD ++ G+I ++ + E G +
Sbjct: 59 MVAVMDSDTTGKLGFEEFKYLWNNIKKWQGIYKRFDTDRSGTIGSNELPGAFEAAGFHLN 118
Query: 149 QEALNEIIKEVDEDGSGELEFNEFCT 174
Q + II+ D +G ++F+ F +
Sbjct: 119 QHIYSMIIRRY-SDETGNMDFDNFIS 143
>pdb|1AJ5|A Chain A, Calpain Domain Vi Apo
pdb|1AJ5|B Chain B, Calpain Domain Vi Apo
Length = 173
Score = 28.1 bits (61), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 19/87 (21%), Positives = 40/87 (45%), Gaps = 11/87 (12%)
Query: 98 EMIEEIDSDGSGTIDFD----------VLTRAFEAFDQEKKGSIPTDMVGTIMEMLGHPQ 147
M+ +DSD +G + F+ ++ FD ++ G+I ++ + E G
Sbjct: 51 SMVAVMDSDTTGKLGFEEFKYLWNNIKKWQGIYKRFDTDRSGTIGSNELPGAFEAAGFHL 110
Query: 148 SQEALNEIIKEVDEDGSGELEFNEFCT 174
+Q + II+ D +G ++F+ F +
Sbjct: 111 NQHIYSMIIRRY-SDETGNMDFDNFIS 136
>pdb|2PVB|A Chain A, Pike Parvalbumin (Pi 4.10) At Low Temperature (100k) And
Atomic Resolution (0.91 A).
pdb|3PAL|A Chain A, Ionic Interactions With Parvalbumins. Crystal Structure
Determination Of Pike 4.10 Parvalbumin In Four Different
Ionic Environments
pdb|1PVB|A Chain A, X-Ray Structure Of A New Crystal Form Of Pike 4.10
Parvalbumin
pdb|2PAL|A Chain A, Ionic Interactions With Parvalbumins. Crystal Structure
Determination Of Pike 4.10 Parvalbumin In Four Different
Ionic Environments
pdb|1PAL|A Chain A, Ionic Interactions With Parvalbumins. Crystal Structure
Determination Of Pike 4.10 Parvalbumin In Four Different
Ionic Environments
pdb|4PAL|A Chain A, Ionic Interactions With Parvalbumins. Crystal Structure
Determination Of Pike 4.10 Parvalbumin In Four Different
Ionic Environments
Length = 108
Score = 27.7 bits (60), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
Query: 60 LREAFMLYDREGNGYITTDVLREIISELDPN---LDYEELNEMIEEIDSDGSGTIDFD 114
+++AF + D++ +G+I D L+ + P+ L E + + D DG G I D
Sbjct: 43 VKKAFYVIDQDKSGFIEEDELKLFLQNFSPSARALTDAETKAFLADGDKDGDGMIGVD 100
>pdb|1RJV|A Chain A, Solution Structure Of Human Alpha-Parvalbumin Refined With
A Paramagnetism-Based Strategy
pdb|1RK9|A Chain A, Solution Structure Of Human Alpha-Parvalbumin (Minimized
Average Structure)
Length = 110
Score = 27.7 bits (60), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
Query: 114 DVLTRAFEAFDQEKKGSIPTDMVGTIMEML---GHPQSQEALNEIIKEVDEDGSGELEFN 170
D + + F D++K G I D +G I++ S + ++ D+DG G++ +
Sbjct: 42 DDVKKVFHMLDKDKSGFIEEDELGFILKGFSPDARDLSAKETKMLMAAGDKDGDGKIGVD 101
Query: 171 EFCTL 175
EF TL
Sbjct: 102 EFSTL 106
>pdb|2H6S|A Chain A, Secreted Aspartic Proteinase (sap) 3 From Candida Albicans
pdb|2H6T|A Chain A, Secreted Aspartic Proteinase (Sap) 3 From Candida Albicans
Complexed With Pepstatin A
Length = 340
Score = 27.7 bits (60), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 28/59 (47%), Gaps = 8/59 (13%)
Query: 74 YITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDFDVLTRAFEAFDQEKKGSIP 132
Y+ V ++IS + Y+ + +D + SG++DF AFD+ K S+P
Sbjct: 223 YLQQGVADQVISAFNGQETYDANGNLFYLVDCNLSGSVDF--------AFDKNAKISVP 273
>pdb|2R2I|A Chain A, Myristoylated Guanylate Cyclase Activating Protein-1 With
Calcium Bound
Length = 198
Score = 27.3 bits (59), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 36/83 (43%), Gaps = 21/83 (25%)
Query: 60 LREAFMLYDREGNGYITTDVLREIISEL------DPNLDYEELNEMI-EEIDSDGSGTID 112
LR F LYD +GNG I L II + + + EE M+ ++ID +G G +
Sbjct: 90 LRWYFKLYDVDGNGCIDRGELLNIIKAIRAINRCNEAMTAEEFTNMVFDKIDINGDGELS 149
Query: 113 --------------FDVLTRAFE 121
D+LTR+ +
Sbjct: 150 LEEFMEGVQKDEVLLDILTRSLD 172
>pdb|1BOD|A Chain A, The Solution Structures Of Mutant Calbindin D9k's, As
Determined By Nmr, Show That The Calcium Binding Site
Can Adopt Different Folds
Length = 74
Score = 27.3 bits (59), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Query: 60 LREAFMLYDREGNGYITTDVLREIISELDPNL--DYEELNEMIEEIDSDGSGTIDFD 114
L+ F YD+EG+G ++ + L+ ++ P+L L+E+ EE+D +G G + F+
Sbjct: 7 LKGIFEKYDKEGDGQLSKEELKLLLQTEFPSLLKGMSTLDELFEELDKNGDGEVSFE 63
>pdb|2QZX|A Chain A, Secreted Aspartic Proteinase (Sap) 5 From Candida Albicans
pdb|2QZX|B Chain B, Secreted Aspartic Proteinase (Sap) 5 From Candida Albicans
Length = 342
Score = 26.9 bits (58), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 11/40 (27%), Positives = 19/40 (47%)
Query: 74 YITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDF 113
Y T ++R I+ + + ++ + D SGTIDF
Sbjct: 225 YFTRSIVRNILYAIGAQMKFDSAGNKVYVADCKTSGTIDF 264
>pdb|1MHO|A Chain A, The 2.0 A Structure Of Holo S100b From Bovine Brain
Length = 88
Score = 26.9 bits (58), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 13/46 (28%), Positives = 25/46 (54%)
Query: 127 KKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEF 172
KK + + + L + QE ++++++ +D DG GE +F EF
Sbjct: 28 KKSELKELINNELSHFLEEIKEQEVVDKVMETLDSDGDGECDFQEF 73
Score = 26.6 bits (57), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 10/26 (38%), Positives = 19/26 (73%)
Query: 13 QSQEALNEIIKEVDEDGSGELEFNEF 38
+ QE ++++++ +D DG GE +F EF
Sbjct: 48 KEQEVVDKVMETLDSDGDGECDFQEF 73
>pdb|4FQO|A Chain A, Crystal Structure Of Calcium-loaded S100b Bound To Sbi4211
Length = 89
Score = 26.9 bits (58), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 13/46 (28%), Positives = 25/46 (54%)
Query: 127 KKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEF 172
KK + + + L + QE ++++++ +D DG GE +F EF
Sbjct: 29 KKSELKELINNELSHFLEEIKEQEVVDKVMETLDSDGDGECDFQEF 74
Score = 26.9 bits (58), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 10/26 (38%), Positives = 19/26 (73%)
Query: 13 QSQEALNEIIKEVDEDGSGELEFNEF 38
+ QE ++++++ +D DG GE +F EF
Sbjct: 49 KEQEVVDKVMETLDSDGDGECDFQEF 74
>pdb|3LK0|A Chain A, X-Ray Structure Of Bovine Sc0067,Ca(2+)-S100b
pdb|3LK0|B Chain B, X-Ray Structure Of Bovine Sc0067,Ca(2+)-S100b
pdb|3LK0|C Chain C, X-Ray Structure Of Bovine Sc0067,Ca(2+)-S100b
pdb|3LK0|D Chain D, X-Ray Structure Of Bovine Sc0067,Ca(2+)-S100b
pdb|3LK1|A Chain A, X-Ray Structure Of Bovine Sc0322,Ca(2+)-S100b
Length = 90
Score = 26.9 bits (58), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 13/46 (28%), Positives = 25/46 (54%)
Query: 127 KKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEF 172
KK + + + L + QE ++++++ +D DG GE +F EF
Sbjct: 29 KKSELKELINNELSHFLEEIKEQEVVDKVMETLDSDGDGECDFQEF 74
Score = 26.6 bits (57), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 10/26 (38%), Positives = 19/26 (73%)
Query: 13 QSQEALNEIIKEVDEDGSGELEFNEF 38
+ QE ++++++ +D DG GE +F EF
Sbjct: 49 KEQEVVDKVMETLDSDGDGECDFQEF 74
>pdb|1PSB|A Chain A, Solution Structure Of Calcium Loaded S100b Complexed To A
Peptide From N-Terminal Regulatory Domain Of Ndr Kinase.
pdb|1PSB|B Chain B, Solution Structure Of Calcium Loaded S100b Complexed To A
Peptide From N-Terminal Regulatory Domain Of Ndr Kinase
Length = 91
Score = 26.9 bits (58), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 13/46 (28%), Positives = 25/46 (54%)
Query: 127 KKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEF 172
KK + + + L + QE ++++++ +D DG GE +F EF
Sbjct: 28 KKSELKELINNELSHFLEEIKEQEVVDKVMETLDSDGDGECDFQEF 73
>pdb|1CFP|A Chain A, S100b (S100beta) Nmr Data Was Collected From A Sample Of
Calcium Free Protein At Ph 6.3 And A Temperature Of 311
K And 1.7-6.9 Mm Concentration, 25 Structures
pdb|1CFP|B Chain B, S100b (S100beta) Nmr Data Was Collected From A Sample Of
Calcium Free Protein At Ph 6.3 And A Temperature Of 311
K And 1.7-6.9 Mm Concentration, 25 Structures
pdb|3CR2|A Chain A, X-ray Structure Of Bovine Zn(2+),ca(2+)-s100b
pdb|3CR5|X Chain X, X-Ray Structure Of Bovine Pnt-Zn(2+),Ca(2+)-S100b
pdb|3CR4|X Chain X, X-Ray Structure Of Bovine Pnt,Ca(2+)-S100b
pdb|3GK1|A Chain A, X-Ray Structure Of Bovine Sbi132,Ca(2+)-S100b
pdb|3GK2|A Chain A, X-Ray Structure Of Bovine Sbi279,Ca(2+)-S100b
pdb|3GK4|X Chain X, X-Ray Structure Of Bovine Sbi523,Ca(2+)-S100b
pdb|3IQO|A Chain A, 1.5 Angstrom X-ray Structure Of Bovine Ca(2+)-s100b
pdb|3IQO|B Chain B, 1.5 Angstrom X-ray Structure Of Bovine Ca(2+)-s100b
pdb|3IQQ|A Chain A, X-Ray Structure Of Bovine Trtk12-Ca(2+)-S100b
pdb|3LLE|A Chain A, X-Ray Structure Of Bovine Sc0322,Ca(2+)-S100b
pdb|3LLE|B Chain B, X-Ray Structure Of Bovine Sc0322,Ca(2+)-S100b
Length = 92
Score = 26.9 bits (58), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 13/46 (28%), Positives = 25/46 (54%)
Query: 127 KKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEF 172
KK + + + L + QE ++++++ +D DG GE +F EF
Sbjct: 29 KKSELKELINNELSHFLEEIKEQEVVDKVMETLDSDGDGECDFQEF 74
Score = 26.6 bits (57), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 10/26 (38%), Positives = 19/26 (73%)
Query: 13 QSQEALNEIIKEVDEDGSGELEFNEF 38
+ QE ++++++ +D DG GE +F EF
Sbjct: 49 KEQEVVDKVMETLDSDGDGECDFQEF 74
>pdb|1U5I|A Chain A, Crystal Structure Analysis Of Rat M-Calpain Mutant Lys10
Thr
Length = 700
Score = 26.9 bits (58), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 31/136 (22%), Positives = 57/136 (41%), Gaps = 23/136 (16%)
Query: 14 SQEALNEIIKEVDEDGSGELEFNEFCTLXXXXXXXXXXXXXXXXXXLREAFMLYDREGNG 73
S E ++ +DEDGSG+L EF L ++ + D + +G
Sbjct: 573 SIETCKIMVDMLDEDGSGKLGLKEFYIL------------WTKIQKYQKIYREIDVDRSG 620
Query: 74 YITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDFD----------VLTRAFEAF 123
+ + +R+ + E L +L+++I +D IDFD +L + F+
Sbjct: 621 TMNSYEMRKALEEAGFKLPC-QLHQVIVARFADDELIIDFDNFVRCLVRLEILFKIFKQL 679
Query: 124 DQEKKGSIPTDMVGTI 139
D E G+I D++ +
Sbjct: 680 DPENTGTIQLDLISWL 695
>pdb|1DF0|A Chain A, Crystal Structure Of M-Calpain
Length = 700
Score = 26.9 bits (58), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 31/136 (22%), Positives = 57/136 (41%), Gaps = 23/136 (16%)
Query: 14 SQEALNEIIKEVDEDGSGELEFNEFCTLXXXXXXXXXXXXXXXXXXLREAFMLYDREGNG 73
S E ++ +DEDGSG+L EF L ++ + D + +G
Sbjct: 573 SIETCKIMVDMLDEDGSGKLGLKEFYIL------------WTKIQKYQKIYREIDVDRSG 620
Query: 74 YITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDFD----------VLTRAFEAF 123
+ + +R+ + E L +L+++I +D IDFD +L + F+
Sbjct: 621 TMNSYEMRKALEEAGFKLPC-QLHQVIVARFADDELIIDFDNFVRCLVRLEILFKIFKQL 679
Query: 124 DQEKKGSIPTDMVGTI 139
D E G+I D++ +
Sbjct: 680 DPENTGTIQLDLISWL 695
>pdb|1MQ1|A Chain A, Ca2+-S100b-Trtk-12 Complex
pdb|1MQ1|B Chain B, Ca2+-S100b-Trtk-12 Complex
pdb|1UWO|A Chain A, Calcium Form Of Human S100b, Nmr, 20 Structures
pdb|1UWO|B Chain B, Calcium Form Of Human S100b, Nmr, 20 Structures
pdb|2PRU|A Chain A, Nmr Structure Of Human Apos100b At 10c
pdb|2PRU|B Chain B, Nmr Structure Of Human Apos100b At 10c
Length = 91
Score = 26.9 bits (58), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 13/46 (28%), Positives = 25/46 (54%)
Query: 127 KKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEF 172
KK + + + L + QE ++++++ +D DG GE +F EF
Sbjct: 28 KKSELKELINNELSHFLEEIKEQEVVDKVMETLDNDGDGECDFQEF 73
>pdb|2H61|C Chain C, X-ray Structure Of Human Ca2+-loaded S100b
pdb|2H61|D Chain D, X-ray Structure Of Human Ca2+-loaded S100b
pdb|2H61|G Chain G, X-ray Structure Of Human Ca2+-loaded S100b
pdb|3D0Y|A Chain A, Crystal Structure Of S100b In The Calcium And Zinc Loaded
State At Ph 6.5
Length = 92
Score = 26.9 bits (58), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 13/46 (28%), Positives = 25/46 (54%)
Query: 127 KKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNEF 172
KK + + + L + QE ++++++ +D DG GE +F EF
Sbjct: 29 KKSELKELINNELSHFLEEIKEQEVVDKVMETLDNDGDGECDFQEF 74
>pdb|1SL8|A Chain A, Calcium-Loaded Apo-Aequorin From Aequorea Victoria
Length = 191
Score = 26.6 bits (57), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 26/52 (50%)
Query: 120 FEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNE 171
F+ D+++ G+I D + G QS E E + D D SG+L+ +E
Sbjct: 115 FDIIDKDQNGAISLDEWKAYTKSAGIIQSSEDCEETFRVCDIDESGQLDVDE 166
>pdb|3DF0|A Chain A, Calcium-Dependent Complex Between M-Calpain And
Calpastatin
pdb|3BOW|A Chain A, Structure Of M-Calpain In Complex With Calpastatin
Length = 714
Score = 26.6 bits (57), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 31/136 (22%), Positives = 57/136 (41%), Gaps = 23/136 (16%)
Query: 14 SQEALNEIIKEVDEDGSGELEFNEFCTLXXXXXXXXXXXXXXXXXXLREAFMLYDREGNG 73
S E ++ +DEDGSG+L EF L ++ + D + +G
Sbjct: 573 SIETCKIMVDMLDEDGSGKLGLKEFYIL------------WTKIQKYQKIYREIDVDRSG 620
Query: 74 YITTDVLREIISELDPNLDYEELNEMIEEIDSDGSGTIDFD----------VLTRAFEAF 123
+ + +R+ + E L +L+++I +D IDFD +L + F+
Sbjct: 621 TMNSYEMRKALEEAGFKLPC-QLHQVIVARFADDELIIDFDNFVRCLVRLEILFKIFKQL 679
Query: 124 DQEKKGSIPTDMVGTI 139
D E G+I D++ +
Sbjct: 680 DPENTGTIQLDLISWL 695
>pdb|3V4G|A Chain A, 1.60 Angstrom Resolution Crystal Structure Of An Arginine
Repressor From Vibrio Vulnificus Cmcp6
Length = 180
Score = 26.6 bits (57), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 15/65 (23%), Positives = 31/65 (47%)
Query: 98 EMIEEIDSDGSGTIDFDVLTRAFEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIK 157
E++E + +G I+ ++R F + + +MV + LG P +L E++
Sbjct: 52 EIVEALKQEGFENINQSKVSRMLTKFGAVRTRNAKMEMVYCLPTELGVPTVSSSLRELVL 111
Query: 158 EVDED 162
+VD +
Sbjct: 112 DVDHN 116
>pdb|1EJ3|A Chain A, Crystal Structure Of Aequorin
pdb|1EJ3|B Chain B, Crystal Structure Of Aequorin
pdb|1UHI|A Chain A, Crystal Structure Of I-aequorin
pdb|1UHI|B Chain B, Crystal Structure Of I-aequorin
pdb|1UHK|A Chain A, Crystal Structure Of N-Aequorin
pdb|1UHK|B Chain B, Crystal Structure Of N-Aequorin
Length = 191
Score = 26.6 bits (57), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 26/52 (50%)
Query: 120 FEAFDQEKKGSIPTDMVGTIMEMLGHPQSQEALNEIIKEVDEDGSGELEFNE 171
F+ D+++ G+I D + G QS E E + D D SG+L+ +E
Sbjct: 115 FDIVDKDQNGAITLDEWKAYTKAAGIIQSSEDCEETFRVCDIDESGQLDVDE 166
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.316 0.137 0.379
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,422,246
Number of Sequences: 62578
Number of extensions: 197035
Number of successful extensions: 2029
Number of sequences better than 100.0: 318
Number of HSP's better than 100.0 without gapping: 267
Number of HSP's successfully gapped in prelim test: 51
Number of HSP's that attempted gapping in prelim test: 697
Number of HSP's gapped (non-prelim): 936
length of query: 214
length of database: 14,973,337
effective HSP length: 95
effective length of query: 119
effective length of database: 9,028,427
effective search space: 1074382813
effective search space used: 1074382813
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 49 (23.5 bits)