BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy4736
(98 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q63170|DYH7_RAT Dynein heavy chain 7, axonemal OS=Rattus norvegicus GN=Dnah7 PE=2
SV=2
Length = 4057
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 44/69 (63%), Positives = 56/69 (81%)
Query: 30 RTEKEIDDARMMYIPVSKHSSVLFFCCAELSNIDPMYQYSLNWFINLYVQSIEGSEKTDQ 89
TEK+ID+ RM Y P++ HSS+LFF A+L+NI+PMYQYSL WFINL++ SIE SEK+D
Sbjct: 3224 ETEKKIDNTRMGYRPIAVHSSILFFSIADLANIEPMYQYSLTWFINLFILSIENSEKSDI 3283
Query: 90 LDKRLKILR 98
L +RL ILR
Sbjct: 3284 LSQRLHILR 3292
>sp|Q8WXX0|DYH7_HUMAN Dynein heavy chain 7, axonemal OS=Homo sapiens GN=DNAH7 PE=1 SV=2
Length = 4024
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 43/69 (62%), Positives = 56/69 (81%)
Query: 30 RTEKEIDDARMMYIPVSKHSSVLFFCCAELSNIDPMYQYSLNWFINLYVQSIEGSEKTDQ 89
TEK+ID RM Y P++ HSS+LFF A+L+NI+PMYQYSL WFINL++ SIE SEK++
Sbjct: 3191 ETEKKIDTTRMGYRPIAIHSSILFFSLADLANIEPMYQYSLTWFINLFILSIENSEKSEI 3250
Query: 90 LDKRLKILR 98
L KRL+IL+
Sbjct: 3251 LAKRLQILK 3259
>sp|Q8BW94|DYH3_MOUSE Dynein heavy chain 3, axonemal OS=Mus musculus GN=Dnah3 PE=1 SV=2
Length = 4083
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 39/69 (56%), Positives = 55/69 (79%)
Query: 29 SRTEKEIDDARMMYIPVSKHSSVLFFCCAELSNIDPMYQYSLNWFINLYVQSIEGSEKTD 88
S TE +ID+ RM Y PV+ HS+ +FFC ++L++I+PMYQYSL WFINLYVQS+ S K+D
Sbjct: 3248 SVTETQIDETRMGYKPVAVHSAAIFFCISDLAHIEPMYQYSLTWFINLYVQSLANSNKSD 3307
Query: 89 QLDKRLKIL 97
+LD R++ +
Sbjct: 3308 ELDLRIEYI 3316
>sp|Q8TD57|DYH3_HUMAN Dynein heavy chain 3, axonemal OS=Homo sapiens GN=DNAH3 PE=2 SV=1
Length = 4116
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 37/69 (53%), Positives = 54/69 (78%)
Query: 29 SRTEKEIDDARMMYIPVSKHSSVLFFCCAELSNIDPMYQYSLNWFINLYVQSIEGSEKTD 88
S TE +ID+ RM Y PV+ HS+ +FFC ++L+NI+PMYQYSL WFINLY+ S+ S K++
Sbjct: 3281 SMTETQIDETRMGYKPVAVHSATIFFCISDLANIEPMYQYSLTWFINLYMHSLTHSTKSE 3340
Query: 89 QLDKRLKIL 97
+L+ R+K +
Sbjct: 3341 ELNLRIKYI 3349
>sp|Q63164|DYH1_RAT Dynein heavy chain 1, axonemal OS=Rattus norvegicus GN=Dnah1 PE=2
SV=2
Length = 4516
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 50/65 (76%)
Query: 30 RTEKEIDDARMMYIPVSKHSSVLFFCCAELSNIDPMYQYSLNWFINLYVQSIEGSEKTDQ 89
+TEK+ID RM YIPV+ + +LFFC ++L+N+DPMYQYSL WF+N+++ I SE+ D
Sbjct: 3685 QTEKDIDLTRMEYIPVAVRTQILFFCVSDLANVDPMYQYSLEWFLNIFLSGIANSERADN 3744
Query: 90 LDKRL 94
L KR+
Sbjct: 3745 LKKRI 3749
>sp|Q9P2D7|DYH1_HUMAN Dynein heavy chain 1, axonemal OS=Homo sapiens GN=DNAH1 PE=2 SV=4
Length = 4330
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 50/65 (76%)
Query: 30 RTEKEIDDARMMYIPVSKHSSVLFFCCAELSNIDPMYQYSLNWFINLYVQSIEGSEKTDQ 89
+TEK+ID RM YIPV+ + +LFFC ++L+N+DPMYQYSL WF+N+++ I SE+ D
Sbjct: 3499 QTEKDIDLTRMEYIPVAIRTQILFFCVSDLANVDPMYQYSLEWFLNIFLSGIANSERADN 3558
Query: 90 LDKRL 94
L KR+
Sbjct: 3559 LKKRI 3563
>sp|Q9C0G6|DYH6_HUMAN Dynein heavy chain 6, axonemal OS=Homo sapiens GN=DNAH6 PE=1 SV=3
Length = 4158
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 47/78 (60%)
Query: 20 CVDTHTGGPSRTEKEIDDARMMYIPVSKHSSVLFFCCAELSNIDPMYQYSLNWFINLYVQ 79
+ T TE+ I+ AR Y PV+ SV++F A LS IDPMYQYSL +F L+
Sbjct: 3269 AIKTRLEEAESTEQMINVAREKYRPVATQGSVMYFVIASLSEIDPMYQYSLKYFKQLFNT 3328
Query: 80 SIEGSEKTDQLDKRLKIL 97
+IE S KT+ L +RL +L
Sbjct: 3329 TIETSVKTENLQQRLDVL 3346
>sp|Q9MBF8|DYH1B_CHLRE Dynein-1-beta heavy chain, flagellar inner arm I1 complex
OS=Chlamydomonas reinhardtii GN=DHC10 PE=1 SV=1
Length = 4513
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 49/77 (63%)
Query: 21 VDTHTGGPSRTEKEIDDARMMYIPVSKHSSVLFFCCAELSNIDPMYQYSLNWFINLYVQS 80
V+ T+K+I+ A +Y P S +SVL+F +LS IDPMYQ+SL+ + +L++ S
Sbjct: 3672 VNASLAVAEETQKKIEAASQLYRPCSVRASVLYFVLNDLSTIDPMYQFSLDAYNDLFLLS 3731
Query: 81 IEGSEKTDQLDKRLKIL 97
I+ S K D L +R+K L
Sbjct: 3732 IKNSPKNDNLAERIKSL 3748
>sp|P0C6F1|DYH2_MOUSE Dynein heavy chain 2, axonemal OS=Mus musculus GN=Dnah2 PE=2 SV=1
Length = 4456
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 47/67 (70%)
Query: 31 TEKEIDDARMMYIPVSKHSSVLFFCCAELSNIDPMYQYSLNWFINLYVQSIEGSEKTDQL 90
TE ID AR Y P ++ +SVLFF ++ IDPMYQ+SL+ +I L++ SI+ S ++++L
Sbjct: 3625 TEINIDLAREAYRPCAQRASVLFFVLNDMGRIDPMYQFSLDAYIGLFILSIDKSHRSNKL 3684
Query: 91 DKRLKIL 97
+ R++ L
Sbjct: 3685 EDRIEYL 3691
>sp|Q9P225|DYH2_HUMAN Dynein heavy chain 2, axonemal OS=Homo sapiens GN=DNAH2 PE=2 SV=3
Length = 4427
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 46/67 (68%)
Query: 31 TEKEIDDARMMYIPVSKHSSVLFFCCAELSNIDPMYQYSLNWFINLYVQSIEGSEKTDQL 90
TE D AR Y P ++ +S+LFF ++ IDPMYQ+SL+ +I+L++ SI+ S ++++L
Sbjct: 3596 TEINTDLAREAYRPCAQRASILFFVLNDMGCIDPMYQFSLDAYISLFILSIDKSHRSNKL 3655
Query: 91 DKRLKIL 97
+ R+ L
Sbjct: 3656 EDRIDYL 3662
>sp|Q96DT5|DYH11_HUMAN Dynein heavy chain 11, axonemal OS=Homo sapiens GN=DNAH11 PE=1 SV=3
Length = 4523
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 45/66 (68%)
Query: 32 EKEIDDARMMYIPVSKHSSVLFFCCAELSNIDPMYQYSLNWFINLYVQSIEGSEKTDQLD 91
E++I++AR Y P++ +S+L+F +L I+P+YQ+SL F L+ ++IE ++K + +
Sbjct: 3702 ERKINEARECYRPLAARASLLYFVINDLQKINPLYQFSLKAFNVLFHRAIEQADKVEDMQ 3761
Query: 92 KRLKIL 97
R+ IL
Sbjct: 3762 GRISIL 3767
>sp|Q69Z23|DYH17_MOUSE Dynein heavy chain 17, axonemal OS=Mus musculus GN=Dnah17 PE=2 SV=2
Length = 4481
Score = 50.4 bits (119), Expect = 3e-06, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 44/64 (68%)
Query: 31 TEKEIDDARMMYIPVSKHSSVLFFCCAELSNIDPMYQYSLNWFINLYVQSIEGSEKTDQL 90
TE +I++AR Y P ++ +S+L+F +L+ I+P+YQ+SL F ++ ++I+ + D++
Sbjct: 3624 TEVKINEARENYRPAAERASLLYFILNDLNKINPIYQFSLKAFNVVFEKAIQKTAPADEV 3683
Query: 91 DKRL 94
+R+
Sbjct: 3684 KQRV 3687
>sp|Q9SMH3|DYH1A_CHLRE Dynein-1-alpha heavy chain, flagellar inner arm I1 complex
OS=Chlamydomonas reinhardtii GN=DHC1 PE=1 SV=1
Length = 4625
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 39/65 (60%)
Query: 31 TEKEIDDARMMYIPVSKHSSVLFFCCAELSNIDPMYQYSLNWFINLYVQSIEGSEKTDQL 90
T EI++ R+ Y P +K ++LFF A LS I MY+YSL F+ ++ S+ S + +
Sbjct: 3781 TAAEIEETRVRYSPAAKRGAILFFVIAGLSAITNMYEYSLASFLVVFNGSLHSSRRDASI 3840
Query: 91 DKRLK 95
+ RL+
Sbjct: 3841 EGRLR 3845
>sp|P39057|DYHC_HELCR Dynein beta chain, ciliary OS=Heliocidaris crassispina PE=1 SV=1
Length = 4466
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 47/82 (57%), Gaps = 2/82 (2%)
Query: 13 RSTAGRLCVDTHTGGPSRTEKEIDDARMMYIPVSKHSSVLFFCCAELSNIDPMYQYSLNW 72
+ TA + V TE +I++AR +Y P + +S+L+F +L+ I+P+YQ+SL
Sbjct: 3628 KRTAAEISVKVEEA--KVTEVKINEARELYRPAAARASLLYFILNDLNKINPIYQFSLKA 3685
Query: 73 FINLYVQSIEGSEKTDQLDKRL 94
F ++ SI +E + + +R+
Sbjct: 3686 FNTVFSLSIARAEPCEDVKERV 3707
>sp|Q96JB1|DYH8_HUMAN Dynein heavy chain 8, axonemal OS=Homo sapiens GN=DNAH8 PE=1 SV=2
Length = 4490
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 46/89 (51%), Gaps = 2/89 (2%)
Query: 6 CGRFSRHRSTAGRLCVDTHTGGPSRTEKEIDDARMMYIPVSKHSSVLFFCCAELSNIDPM 65
G + TA + H + TE +I+ A+ + P + S+L+F E+S ++ M
Sbjct: 3647 IGVLRTTKQTAAEVSEKLHVA--AETEIKINAAQEEFRPAATRGSILYFLITEMSMVNIM 3704
Query: 66 YQYSLNWFINLYVQSIEGSEKTDQLDKRL 94
YQ SL F+ L+ QS+ SEK+ KR+
Sbjct: 3705 YQTSLAQFLKLFDQSMARSEKSPLPQKRI 3733
>sp|Q39575|DYHG_CHLRE Dynein gamma chain, flagellar outer arm OS=Chlamydomonas reinhardtii
GN=ODA2 PE=1 SV=1
Length = 4485
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 41/74 (55%)
Query: 21 VDTHTGGPSRTEKEIDDARMMYIPVSKHSSVLFFCCAELSNIDPMYQYSLNWFINLYVQS 80
V S T K I++A Y PV+ +++L+F AE S ++ MYQ SL F LY +
Sbjct: 3641 VSEKLANASETNKRINEACEEYRPVAHRATLLYFLIAEFSVVNCMYQTSLAQFNQLYELA 3700
Query: 81 IEGSEKTDQLDKRL 94
I+ SEK + KR+
Sbjct: 3701 IDRSEKANMPSKRI 3714
>sp|Q9NYC9|DYH9_HUMAN Dynein heavy chain 9, axonemal OS=Homo sapiens GN=DNAH9 PE=1 SV=3
Length = 4486
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 42/67 (62%)
Query: 31 TEKEIDDARMMYIPVSKHSSVLFFCCAELSNIDPMYQYSLNWFINLYVQSIEGSEKTDQL 90
TE +I++AR Y P + +S+L+F +LS I PMYQ+SL F ++ +++E + + L
Sbjct: 3664 TEVKINEAREHYRPAAARASLLYFIMNDLSKIHPMYQFSLKAFSIVFQKAVERAAPDESL 3723
Query: 91 DKRLKIL 97
+R+ L
Sbjct: 3724 RERVANL 3730
>sp|Q91XQ0|DYH8_MOUSE Dynein heavy chain 8, axonemal OS=Mus musculus GN=Dnahc8 PE=2 SV=2
Length = 4731
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 45/82 (54%), Gaps = 2/82 (2%)
Query: 13 RSTAGRLCVDTHTGGPSRTEKEIDDARMMYIPVSKHSSVLFFCCAELSNIDPMYQYSLNW 72
+ TA + H + TE +I+ A+ + P + S+L+F E+S ++ MYQ SL
Sbjct: 3895 KQTAAEVSEKLHVA--AETEIKINTAQEEFRPAATRGSILYFLITEMSMVNIMYQTSLAQ 3952
Query: 73 FINLYVQSIEGSEKTDQLDKRL 94
F+ L+ QS+ SEK+ KR+
Sbjct: 3953 FLKLFDQSMARSEKSPLPQKRI 3974
>sp|Q9UFH2|DYH17_HUMAN Dynein heavy chain 17, axonemal OS=Homo sapiens GN=DNAH17 PE=1 SV=2
Length = 4485
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 52/101 (51%), Gaps = 8/101 (7%)
Query: 2 LSRQCGRFSRHRSTAGRLCVDTHTGGPSR--------TEKEIDDARMMYIPVSKHSSVLF 53
LS G F + L HT TE +I++AR Y P ++ +S+L+
Sbjct: 3589 LSAASGNFLGDTALVENLETTKHTASEIEEKVVEAKITEVKINEARENYRPAAERASLLY 3648
Query: 54 FCCAELSNIDPMYQYSLNWFINLYVQSIEGSEKTDQLDKRL 94
F +L+ I+P+YQ+SL F ++ ++I+ + +++ +R+
Sbjct: 3649 FILNDLNKINPVYQFSLKAFNVVFEKAIQRTTPANEVKQRV 3689
>sp|P23098|DYHC_TRIGR Dynein beta chain, ciliary OS=Tripneustes gratilla PE=1 SV=1
Length = 4466
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 46/82 (56%), Gaps = 2/82 (2%)
Query: 13 RSTAGRLCVDTHTGGPSRTEKEIDDARMMYIPVSKHSSVLFFCCAELSNIDPMYQYSLNW 72
+ TA + V TE +I++AR +Y P + +S+L+F +L+ I+P+YQ+SL
Sbjct: 3628 KRTAAEISVKVEEA--KVTEVKINEARELYRPAAARASLLYFILNDLNKINPIYQFSLKA 3685
Query: 73 FINLYVQSIEGSEKTDQLDKRL 94
F ++ I +E + + +R+
Sbjct: 3686 FNTVFSLPIARAEPCEDVKERV 3707
>sp|Q0VDD8|DYH14_HUMAN Dynein heavy chain 14, axonemal OS=Homo sapiens GN=DNAH14 PE=2 SV=3
Length = 3507
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 30/44 (68%)
Query: 30 RTEKEIDDARMMYIPVSKHSSVLFFCCAELSNIDPMYQYSLNWF 73
+ E EI R Y+P++ ++L+F A+L+ I+ MYQ+SL+WF
Sbjct: 2695 KAESEIQAIRKNYLPIATRGALLYFLVADLTQINYMYQFSLDWF 2738
>sp|Q27802|DYHC2_TRIGR Cytoplasmic dynein 2 heavy chain 1 OS=Tripneustes gratilla GN=DYH1B
PE=2 SV=2
Length = 4318
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 37/52 (71%)
Query: 32 EKEIDDARMMYIPVSKHSSVLFFCCAELSNIDPMYQYSLNWFINLYVQSIEG 83
++ +D R Y+P++++ S LFF ++L+ ++ MY++SL F+ L+ ++++G
Sbjct: 3496 QESLDQERAAYLPLAENGSALFFVISDLAKLNNMYRFSLGAFLRLFSKALQG 3547
>sp|Q8VHE6|DYH5_MOUSE Dynein heavy chain 5, axonemal OS=Mus musculus GN=Dnah5 PE=1 SV=2
Length = 4621
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 43/86 (50%), Gaps = 2/86 (2%)
Query: 9 FSRHRSTAGRLCVDTHTGGPSRTEKEIDDARMMYIPVSKHSSVLFFCCAELSNIDPMYQY 68
S + TA + G TE +I+ AR Y PV+ S+L+F E+ ++ MYQ
Sbjct: 3782 LSNTKKTAEEVTQKLEISG--ETEIQINSAREEYRPVATRGSILYFLITEMRLVNEMYQT 3839
Query: 69 SLNWFINLYVQSIEGSEKTDQLDKRL 94
SL F+ L+ S+ S K+ KR+
Sbjct: 3840 SLRQFLGLFDLSLARSVKSPITSKRI 3865
>sp|Q8TE73|DYH5_HUMAN Dynein heavy chain 5, axonemal OS=Homo sapiens GN=DNAH5 PE=1 SV=3
Length = 4624
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 38/66 (57%)
Query: 29 SRTEKEIDDARMMYIPVSKHSSVLFFCCAELSNIDPMYQYSLNWFINLYVQSIEGSEKTD 88
+ TE +I+ AR Y PV+ S+L+F E+ ++ MYQ SL F+ L+ S+ S K+
Sbjct: 3803 AETEVQINSAREEYRPVATRGSILYFLITEMRLVNEMYQTSLRQFLGLFDLSLARSVKSP 3862
Query: 89 QLDKRL 94
KR+
Sbjct: 3863 ITSKRI 3868
>sp|Q8NCM8|DYHC2_HUMAN Cytoplasmic dynein 2 heavy chain 1 OS=Homo sapiens GN=DYNC2H1 PE=1
SV=4
Length = 4307
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 43/63 (68%)
Query: 35 IDDARMMYIPVSKHSSVLFFCCAELSNIDPMYQYSLNWFINLYVQSIEGSEKTDQLDKRL 94
+D R Y+P+++ +S ++F ++LS I+ MY++SL F+ L+ ++++ + ++ ++R+
Sbjct: 3485 LDQERDAYLPLAESASKMYFIISDLSKINNMYRFSLAAFLRLFQRALQNKQDSENTEQRI 3544
Query: 95 KIL 97
+ L
Sbjct: 3545 QSL 3547
>sp|Q8IVF4|DYH10_HUMAN Dynein heavy chain 10, axonemal OS=Homo sapiens GN=DNAH10 PE=1 SV=4
Length = 4471
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 40/67 (59%)
Query: 29 SRTEKEIDDARMMYIPVSKHSSVLFFCCAELSNIDPMYQYSLNWFINLYVQSIEGSEKTD 88
+T +ID R Y P ++ ++LFF +E++ ++ MYQYSL F+ ++ S++ S
Sbjct: 3635 EKTALDIDRLRDGYRPAARRGAILFFVLSEMALVNSMYQYSLIAFLEVFRLSLKKSLPDS 3694
Query: 89 QLDKRLK 95
L KRL+
Sbjct: 3695 ILMKRLR 3701
>sp|Q45VK7|DYHC2_MOUSE Cytoplasmic dynein 2 heavy chain 1 OS=Mus musculus GN=Dync2h1 PE=1
SV=1
Length = 4306
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 43/63 (68%)
Query: 35 IDDARMMYIPVSKHSSVLFFCCAELSNIDPMYQYSLNWFINLYVQSIEGSEKTDQLDKRL 94
+D R Y+P+++ +S ++F ++LS I+ MY++SL F+ L+ ++++ + ++ ++R+
Sbjct: 3484 LDQERDAYLPLAESASKMYFIISDLSKINNMYRFSLASFLRLFQRALQNKQDSENTEERI 3543
Query: 95 KIL 97
+ L
Sbjct: 3544 QCL 3546
>sp|Q9JJ79|DYHC2_RAT Cytoplasmic dynein 2 heavy chain 1 OS=Rattus norvegicus GN=Dync2h1
PE=1 SV=1
Length = 4306
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 43/63 (68%)
Query: 35 IDDARMMYIPVSKHSSVLFFCCAELSNIDPMYQYSLNWFINLYVQSIEGSEKTDQLDKRL 94
+D R Y+P+++ +S ++F ++LS I+ MY++SL F+ L+ ++++ + ++ ++R+
Sbjct: 3484 LDRERDAYLPLAESASKMYFIISDLSKINNMYRFSLASFLRLFQRALQNKQDSESTEQRI 3543
Query: 95 KIL 97
+ L
Sbjct: 3544 QCL 3546
>sp|Q9SMH5|DYHC2_CHLRE Cytoplasmic dynein 2 heavy chain 1 OS=Chlamydomonas reinhardtii
GN=DHC1B PE=1 SV=2
Length = 4334
Score = 43.5 bits (101), Expect = 4e-04, Method: Composition-based stats.
Identities = 16/51 (31%), Positives = 34/51 (66%)
Query: 32 EKEIDDARMMYIPVSKHSSVLFFCCAELSNIDPMYQYSLNWFINLYVQSIE 82
+ +D R +Y P++ SV++F A+L ++ MY +SL+ F+NL+ ++++
Sbjct: 3501 QASLDQQREVYRPIAARGSVMYFLLADLQALNQMYTFSLSVFLNLFKKALD 3551
>sp|Q27171|DYHC_PARTE Dynein heavy chain, cytoplasmic OS=Paramecium tetraurelia GN=DHC-8
PE=2 SV=1
Length = 4540
Score = 39.3 bits (90), Expect = 0.007, Method: Composition-based stats.
Identities = 18/65 (27%), Positives = 37/65 (56%)
Query: 34 EIDDARMMYIPVSKHSSVLFFCCAELSNIDPMYQYSLNWFINLYVQSIEGSEKTDQLDKR 93
E+ + Y+P++ +S +FF L+NI +YQ+SL +F++ + +E+ ++ K+
Sbjct: 3684 EVMNTTHSYVPLANTTSKIFFSLTSLANIHYLYQFSLQFFMDTIYNVLNKNEQLQKIPKQ 3743
Query: 94 LKILR 98
I R
Sbjct: 3744 DLIKR 3748
>sp|Q39610|DYHA_CHLRE Dynein alpha chain, flagellar outer arm OS=Chlamydomonas reinhardtii
GN=ODA11 PE=3 SV=2
Length = 4499
Score = 38.9 bits (89), Expect = 0.011, Method: Composition-based stats.
Identities = 17/52 (32%), Positives = 30/52 (57%)
Query: 31 TEKEIDDARMMYIPVSKHSSVLFFCCAELSNIDPMYQYSLNWFINLYVQSIE 82
TE I++ R Y V+ ++LFF L+ I YQ+SLN F+ ++ + ++
Sbjct: 3558 TEAAINENRNKYRTVAARGAMLFFLLNSLNKIHAFYQFSLNAFVTVFSRGLD 3609
>sp|Q14204|DYHC1_HUMAN Cytoplasmic dynein 1 heavy chain 1 OS=Homo sapiens GN=DYNC1H1 PE=1
SV=5
Length = 4646
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 27/45 (60%)
Query: 33 KEIDDARMMYIPVSKHSSVLFFCCAELSNIDPMYQYSLNWFINLY 77
+E++ Y+P+S S ++F L I +YQYSL +F+++Y
Sbjct: 3792 QEVETVSQQYLPLSTACSSIYFTMESLKQIHFLYQYSLQFFLDIY 3836
>sp|P38650|DYHC1_RAT Cytoplasmic dynein 1 heavy chain 1 OS=Rattus norvegicus GN=Dync1h1
PE=1 SV=1
Length = 4644
Score = 37.7 bits (86), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 27/45 (60%)
Query: 33 KEIDDARMMYIPVSKHSSVLFFCCAELSNIDPMYQYSLNWFINLY 77
+E++ Y+P+S S ++F L + +YQYSL +F+++Y
Sbjct: 3790 QEVETVSQQYLPLSTACSSIYFTMESLKQVHFLYQYSLQFFLDIY 3834
>sp|Q9JHU4|DYHC1_MOUSE Cytoplasmic dynein 1 heavy chain 1 OS=Mus musculus GN=Dync1h1 PE=1
SV=2
Length = 4644
Score = 37.7 bits (86), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 27/45 (60%)
Query: 33 KEIDDARMMYIPVSKHSSVLFFCCAELSNIDPMYQYSLNWFINLY 77
+E++ Y+P+S S ++F L + +YQYSL +F+++Y
Sbjct: 3790 QEVETVSQQYLPLSTACSSIYFTMESLKQVHFLYQYSLQFFLDIY 3834
>sp|Q8IBG1|DYHC1_PLAF7 Dynein heavy chain-like protein MAL7P1.162 OS=Plasmodium falciparum
(isolate 3D7) GN=MAL7P1.162 PE=2 SV=2
Length = 4985
Score = 36.6 bits (83), Expect = 0.048, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 33/62 (53%), Gaps = 6/62 (9%)
Query: 42 YIPVSKHSSVLFFCCAELSNIDPMYQYSLNWFINLYVQSIEGS------EKTDQLDKRLK 95
Y+ +++ S+ ++F L NI+ +YQY LN+F N+ +K D +RLK
Sbjct: 4002 YLFLAQGSARIYFILQHLCNINFLYQYDLNFFFNIMKDMFNNDHLLSIVKKKDHYKERLK 4061
Query: 96 IL 97
+L
Sbjct: 4062 VL 4063
>sp|Q8IID4|DYHC2_PLAF7 Dynein heavy chain-like protein PF11_0240 OS=Plasmodium falciparum
(isolate 3D7) GN=PF11_0240 PE=3 SV=1
Length = 5251
Score = 36.2 bits (82), Expect = 0.062, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 29/54 (53%)
Query: 31 TEKEIDDARMMYIPVSKHSSVLFFCCAELSNIDPMYQYSLNWFINLYVQSIEGS 84
TE I+ +Y P+SK + FF +L N+ Y YSL F+ ++++ + S
Sbjct: 3969 TEVHINTIINLYRPLSKRGVMYFFILQKLKNLHSFYFYSLEIFLKIFIKCLNDS 4022
>sp|Q39565|DYHB_CHLRE Dynein beta chain, flagellar outer arm OS=Chlamydomonas reinhardtii
GN=ODA4 PE=3 SV=1
Length = 4568
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 27/45 (60%)
Query: 30 RTEKEIDDARMMYIPVSKHSSVLFFCCAELSNIDPMYQYSLNWFI 74
+TE +I AR +Y PV+ S+ +F L+ +D +Y YS+ F+
Sbjct: 3718 QTEIQIAKAREVYRPVATRGSLTYFLIDNLNALDRVYHYSMANFV 3762
>sp|P37276|DYHC_DROME Dynein heavy chain, cytoplasmic OS=Drosophila melanogaster GN=Dhc64C
PE=2 SV=2
Length = 4639
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 26/44 (59%)
Query: 34 EIDDARMMYIPVSKHSSVLFFCCAELSNIDPMYQYSLNWFINLY 77
EI+ Y+P+S S ++F L+ + +YQYSL F++++
Sbjct: 3779 EIETVSQQYLPLSVACSNIYFTMDSLNQVHFLYQYSLKMFLDIF 3822
>sp|P45444|DYHC_EMENI Dynein heavy chain, cytoplasmic OS=Emericella nidulans (strain FGSC
A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=nudA
PE=3 SV=2
Length = 4345
Score = 30.8 bits (68), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 12/51 (23%), Positives = 29/51 (56%)
Query: 34 EIDDARMMYIPVSKHSSVLFFCCAELSNIDPMYQYSLNWFINLYVQSIEGS 84
E+++ Y +++ S +F +L +I+ YQ+SL +F +++ + G+
Sbjct: 3792 EVEEITQRYSIIARSCSAVFAVLEQLHHINHFYQFSLQYFTDIFESVLHGN 3842
>sp|P78716|DYHC_FUSSO Dynein heavy chain, cytoplasmic OS=Fusarium solani subsp. pisi
GN=DHC1 PE=3 SV=1
Length = 4349
Score = 30.4 bits (67), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 11/52 (21%), Positives = 30/52 (57%)
Query: 34 EIDDARMMYIPVSKHSSVLFFCCAELSNIDPMYQYSLNWFINLYVQSIEGSE 85
E+++ Y +++ S +F +L ++ YQ+SL +F++++ + G++
Sbjct: 3803 EVEEITQQYSIIARSCSAVFAVLEQLHYLNHFYQFSLQYFLDIFQSVLHGNK 3854
>sp|Q19020|DYHC_CAEEL Dynein heavy chain, cytoplasmic OS=Caenorhabditis elegans GN=dhc-1
PE=3 SV=1
Length = 4568
Score = 30.4 bits (67), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Query: 34 EIDDARMMYIPVSKHSSVLFFCCAELSNIDPMYQYSLNWFINLYVQSIEGSEKTDQLD-- 91
E+D Y +S S ++ +L+ I +Y YSL++ + ++ ++ E + D
Sbjct: 3736 EVDAVSAQYQRLSTACSHIYHTLQQLNEIHFLYHYSLDFLVEIFTHVLKTPELSSTTDYA 3795
Query: 92 KRLKIL 97
KRL+I+
Sbjct: 3796 KRLRII 3801
>sp|P34036|DYHC_DICDI Dynein heavy chain, cytoplasmic OS=Dictyostelium discoideum GN=dhcA
PE=1 SV=2
Length = 4730
Score = 30.0 bits (66), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Query: 33 KEIDDARMMYIPVSKHSSVLFFCCAELSNIDPMYQYSLNWFINLY 77
+EI + +Y P++ S ++F ELS +YQ+SL F++++
Sbjct: 3877 QEISEVSALYNPMALSCSRVYFAMEELSQFH-LYQFSLRAFLDIF 3920
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.136 0.416
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 34,924,350
Number of Sequences: 539616
Number of extensions: 1172021
Number of successful extensions: 2862
Number of sequences better than 100.0: 43
Number of HSP's better than 100.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 2817
Number of HSP's gapped (non-prelim): 47
length of query: 98
length of database: 191,569,459
effective HSP length: 67
effective length of query: 31
effective length of database: 155,415,187
effective search space: 4817870797
effective search space used: 4817870797
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 55 (25.8 bits)