BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= psy4741
         (62 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|P49327|FAS_HUMAN Fatty acid synthase OS=Homo sapiens GN=FASN PE=1 SV=3
          Length = 2511

 Score = 60.5 bits (145), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 25/58 (43%), Positives = 37/58 (63%)

Query: 1   MGSQWPGMARELMWFAPFRQAIFECDRVYRPLGLDIVKIITSDDPTTFDDILNSFVAI 58
           MG+QW GM   LM    FR +I   D   +P GL + +++ S D +TFDDI++SFV++
Sbjct: 499 MGTQWRGMGLSLMRLDRFRDSILRSDEAVKPFGLKVSQLLLSTDESTFDDIVHSFVSL 556


>sp|P12785|FAS_RAT Fatty acid synthase OS=Rattus norvegicus GN=Fasn PE=1 SV=3
          Length = 2505

 Score = 60.1 bits (144), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 25/58 (43%), Positives = 37/58 (63%)

Query: 1   MGSQWPGMARELMWFAPFRQAIFECDRVYRPLGLDIVKIITSDDPTTFDDILNSFVAI 58
           MG+QW GM   LM    FR++I   D   +PLG+ +  ++ S D  TFDDI++SFV++
Sbjct: 499 MGTQWRGMGLSLMRLDSFRESILRSDEALKPLGVKVSDLLLSTDEHTFDDIVHSFVSL 556


>sp|P19096|FAS_MOUSE Fatty acid synthase OS=Mus musculus GN=Fasn PE=1 SV=2
          Length = 2504

 Score = 59.3 bits (142), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 24/58 (41%), Positives = 37/58 (63%)

Query: 1   MGSQWPGMARELMWFAPFRQAIFECDRVYRPLGLDIVKIITSDDPTTFDDILNSFVAI 58
           MG+QW GM   LM    FR++I   D   +PLG+ +  ++ S D  TFDDI+++FV++
Sbjct: 499 MGTQWRGMGLSLMRLDSFRESILRSDEAVKPLGVKVSDLLLSTDERTFDDIVHAFVSL 556


>sp|Q71SP7|FAS_BOVIN Fatty acid synthase OS=Bos taurus GN=FASN PE=2 SV=1
          Length = 2513

 Score = 57.8 bits (138), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 24/58 (41%), Positives = 36/58 (62%)

Query: 1   MGSQWPGMARELMWFAPFRQAIFECDRVYRPLGLDIVKIITSDDPTTFDDILNSFVAI 58
           MG+QW GM   LM  + FR +I   D   +PLGL + +++ S D   FDD++ SFV++
Sbjct: 499 MGTQWRGMGLSLMRLSRFRDSILRSDEAVKPLGLQVSQLLLSTDEAIFDDMVISFVSL 556


>sp|P12276|FAS_CHICK Fatty acid synthase OS=Gallus gallus GN=FASN PE=1 SV=5
          Length = 2512

 Score = 52.4 bits (124), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 22/58 (37%), Positives = 33/58 (56%)

Query: 1   MGSQWPGMARELMWFAPFRQAIFECDRVYRPLGLDIVKIITSDDPTTFDDILNSFVAI 58
           MG+QW GM   LM    FRQ+I   D   +  GL +  ++ + D  TFDD +++FV +
Sbjct: 498 MGTQWKGMGLSLMKLDLFRQSILRSDEALKSTGLKVSDLLLNADENTFDDTVHAFVGL 555


>sp|Q03131|ERYA1_SACER Erythronolide synthase, modules 1 and 2 OS=Saccharopolyspora
            erythraea GN=eryA PE=1 SV=1
          Length = 3491

 Score = 36.2 bits (82), Expect = 0.059,   Method: Composition-based stats.
 Identities = 15/27 (55%), Positives = 19/27 (70%)

Query: 2    GSQWPGMARELMWFAPFRQAIFECDRV 28
            G+QW GMAREL+    F ++I ECD V
Sbjct: 2515 GAQWEGMARELLPVPVFAESIAECDAV 2541


>sp|Q03133|ERYA3_SACER Erythronolide synthase, modules 5 and 6 OS=Saccharopolyspora
            erythraea GN=eryA PE=1 SV=4
          Length = 3172

 Score = 33.9 bits (76), Expect = 0.34,   Method: Composition-based stats.
 Identities = 14/27 (51%), Positives = 18/27 (66%)

Query: 2    GSQWPGMARELMWFAPFRQAIFECDRV 28
            G+QW GMAR L+    F ++I ECD V
Sbjct: 2029 GAQWEGMARGLLSVPVFAESIAECDAV 2055


>sp|Q6BYP8|ATG4_DEBHA Probable cysteine protease ATG4 OS=Debaryomyces hansenii (strain
           ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
           GN=ATG4 PE=3 SV=2
          Length = 492

 Score = 30.4 bits (67), Expect = 3.4,   Method: Composition-based stats.
 Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 3/55 (5%)

Query: 1   MGSQWPGMARELMWFAPFRQAIF---ECDRVYRPLGLDIVKIITSDDPTTFDDIL 52
           + S+ P   +   WF P   ++     CD VY   G   VK++ S+    +DDI+
Sbjct: 206 VASESPLKVKPGQWFGPNAASLSIKRLCDNVYESNGTGRVKVVISESSNLYDDII 260


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.330    0.143    0.482 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 24,253,864
Number of Sequences: 539616
Number of extensions: 771614
Number of successful extensions: 2170
Number of sequences better than 100.0: 9
Number of HSP's better than 100.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 2159
Number of HSP's gapped (non-prelim): 13
length of query: 62
length of database: 191,569,459
effective HSP length: 34
effective length of query: 28
effective length of database: 173,222,515
effective search space: 4850230420
effective search space used: 4850230420
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 55 (25.8 bits)