Query psy4744
Match_columns 270
No_of_seqs 178 out of 1427
Neff 9.5
Searched_HMMs 46136
Date Fri Aug 16 16:32:15 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy4744.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/4744hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1394|consensus 100.0 3.2E-53 7E-58 350.7 14.1 267 2-270 43-332 (440)
2 COG3321 Polyketide synthase mo 100.0 4.1E-51 8.9E-56 395.8 22.4 268 2-270 23-314 (1061)
3 PRK08722 3-oxoacyl-(acyl carri 100.0 1.9E-50 4.1E-55 359.5 24.6 267 2-270 23-309 (414)
4 PLN02787 3-oxoacyl-[acyl-carri 100.0 1.5E-50 3.2E-55 367.1 21.9 267 2-270 148-436 (540)
5 TIGR02813 omega_3_PfaA polyket 100.0 5.4E-50 1.2E-54 409.3 24.2 266 2-270 26-346 (2582)
6 cd00832 CLF Chain-length facto 100.0 2.1E-49 4.5E-54 351.8 24.8 266 2-270 20-301 (399)
7 PRK06333 3-oxoacyl-(acyl carri 100.0 6.8E-49 1.5E-53 352.4 23.8 267 2-270 23-319 (424)
8 COG0304 FabB 3-oxoacyl-(acyl-c 100.0 8.6E-49 1.9E-53 343.2 22.8 264 2-270 22-307 (412)
9 PRK09116 3-oxoacyl-(acyl carri 100.0 7.9E-48 1.7E-52 341.9 23.5 266 2-270 21-306 (405)
10 PRK08439 3-oxoacyl-(acyl carri 100.0 1.4E-47 3E-52 341.3 25.1 265 2-270 21-303 (406)
11 PRK07967 3-oxoacyl-(acyl carri 100.0 1.1E-47 2.4E-52 340.2 23.5 262 2-270 21-302 (406)
12 PRK07314 3-oxoacyl-(acyl carri 100.0 2.1E-47 4.6E-52 341.6 23.4 267 2-270 21-307 (411)
13 PRK07910 3-oxoacyl-(acyl carri 100.0 3.5E-47 7.6E-52 338.7 23.7 263 2-270 31-317 (418)
14 PTZ00050 3-oxoacyl-acyl carrie 100.0 9.9E-47 2.1E-51 337.2 23.1 264 2-270 11-315 (421)
15 TIGR03150 fabF beta-ketoacyl-a 100.0 2.4E-46 5.1E-51 334.7 23.6 267 2-270 20-306 (407)
16 PRK06519 3-oxoacyl-(acyl carri 100.0 7.3E-46 1.6E-50 327.0 26.0 261 2-270 25-310 (398)
17 PRK07103 polyketide beta-ketoa 100.0 1.8E-45 3.9E-50 328.0 23.2 265 2-270 21-312 (410)
18 PLN02836 3-oxoacyl-[acyl-carri 100.0 1.5E-45 3.3E-50 330.7 22.0 264 2-270 25-330 (437)
19 cd00828 elong_cond_enzymes "el 100.0 2E-45 4.4E-50 328.7 21.7 262 2-270 23-305 (407)
20 smart00825 PKS_KS Beta-ketoacy 100.0 4.6E-45 1E-49 328.0 22.5 268 2-270 18-310 (424)
21 cd00833 PKS polyketide synthas 100.0 1.4E-44 3.1E-49 324.6 23.1 268 2-270 20-310 (421)
22 cd00834 KAS_I_II Beta-ketoacyl 100.0 3.1E-44 6.8E-49 321.0 24.1 267 2-270 20-306 (406)
23 PRK14691 3-oxoacyl-(acyl carri 100.0 2.2E-44 4.9E-49 311.6 19.3 219 48-270 1-237 (342)
24 PRK05952 3-oxoacyl-(acyl carri 100.0 3.7E-44 8.1E-49 315.0 20.7 251 2-270 20-285 (381)
25 KOG1202|consensus 100.0 1.7E-44 3.8E-49 333.0 13.5 269 2-270 30-307 (2376)
26 PRK06501 3-oxoacyl-(acyl carri 100.0 2.6E-40 5.6E-45 295.9 22.7 261 2-270 30-320 (425)
27 PRK09185 3-oxoacyl-(acyl carri 100.0 7.2E-37 1.6E-41 271.3 21.9 258 2-270 21-291 (392)
28 PF00109 ketoacyl-synt: Beta-k 100.0 2.4E-37 5.2E-42 259.8 12.0 210 2-211 21-254 (254)
29 cd00825 decarbox_cond_enzymes 100.0 2.8E-30 6.1E-35 225.0 22.2 219 51-270 11-236 (332)
30 PRK06147 3-oxoacyl-(acyl carri 100.0 3.2E-27 7E-32 206.2 20.4 196 48-270 62-265 (348)
31 cd00327 cond_enzymes Condensin 99.9 1E-23 2.3E-28 176.9 18.5 166 51-270 7-176 (254)
32 PRK06064 acetyl-CoA acetyltran 99.9 1.7E-21 3.6E-26 173.1 15.1 199 50-270 21-289 (389)
33 PRK05656 acetyl-CoA acetyltran 99.8 3.9E-20 8.5E-25 164.1 15.7 193 51-267 26-319 (393)
34 cd00751 thiolase Thiolase are 99.8 3.9E-20 8.4E-25 164.2 15.3 195 51-269 22-315 (386)
35 PRK07108 acetyl-CoA acetyltran 99.8 5.1E-20 1.1E-24 163.0 14.3 194 50-266 26-317 (392)
36 PRK12578 acetyl-CoA acetyltran 99.8 8.3E-20 1.8E-24 162.0 14.7 195 51-269 21-287 (385)
37 PRK07515 3-oxoacyl-(acyl carri 99.8 1.2E-19 2.6E-24 160.5 15.2 181 50-270 94-302 (372)
38 COG0332 FabH 3-oxoacyl-[acyl-c 99.8 1.2E-19 2.7E-24 154.3 14.2 193 30-266 30-250 (323)
39 PRK06633 acetyl-CoA acetyltran 99.8 1.6E-19 3.5E-24 159.3 13.5 192 51-266 27-317 (392)
40 cd00829 SCP-x_thiolase Thiolas 99.8 5.6E-19 1.2E-23 156.5 16.0 196 50-269 15-281 (375)
41 PRK09051 beta-ketothiolase; Pr 99.8 3.9E-19 8.5E-24 157.5 14.1 194 51-267 27-320 (394)
42 PRK09052 acetyl-CoA acetyltran 99.8 8.7E-19 1.9E-23 155.4 15.8 193 51-266 31-324 (399)
43 PRK07661 acetyl-CoA acetyltran 99.8 6.3E-19 1.4E-23 156.0 14.7 193 51-266 27-316 (391)
44 PLN02287 3-ketoacyl-CoA thiola 99.8 1.2E-18 2.6E-23 156.3 16.4 193 51-266 71-358 (452)
45 PRK07516 acetyl-CoA acetyltran 99.8 1E-18 2.3E-23 155.1 15.4 196 51-269 22-290 (389)
46 PRK08242 acetyl-CoA acetyltran 99.8 7.7E-19 1.7E-23 155.4 13.7 193 51-266 28-327 (402)
47 PRK08131 acetyl-CoA acetyltran 99.8 6.3E-19 1.4E-23 156.3 12.7 192 52-266 27-323 (401)
48 TIGR01930 AcCoA-C-Actrans acet 99.8 5.6E-19 1.2E-23 156.6 12.4 194 51-268 21-315 (386)
49 PRK05790 putative acyltransfer 99.8 1.8E-18 3.9E-23 153.9 15.3 193 51-267 26-319 (393)
50 PRK08256 lipid-transfer protei 99.8 1.4E-18 3E-23 154.4 14.3 193 49-267 20-292 (391)
51 PRK13359 beta-ketoadipyl CoA t 99.8 1.2E-18 2.5E-23 154.4 13.4 192 52-266 27-323 (400)
52 TIGR02430 pcaF beta-ketoadipyl 99.8 9.9E-19 2.1E-23 154.9 12.5 192 52-266 26-323 (400)
53 PRK06445 acetyl-CoA acetyltran 99.8 3E-18 6.5E-23 152.2 15.4 196 51-267 32-320 (394)
54 PRK06205 acetyl-CoA acetyltran 99.8 1.1E-18 2.3E-23 155.5 12.3 192 51-266 26-325 (404)
55 PRK07851 acetyl-CoA acetyltran 99.8 4.4E-18 9.5E-23 151.5 15.0 193 51-266 27-330 (406)
56 PRK06954 acetyl-CoA acetyltran 99.8 5.3E-18 1.1E-22 150.6 15.3 193 51-267 31-323 (397)
57 PRK08963 fadI 3-ketoacyl-CoA t 99.8 3.1E-18 6.8E-23 153.4 13.6 193 52-267 30-337 (428)
58 PRK08235 acetyl-CoA acetyltran 99.8 2.4E-18 5.3E-23 152.5 12.6 193 51-267 26-319 (393)
59 PRK09050 beta-ketoadipyl CoA t 99.8 1.9E-18 4.1E-23 153.2 11.9 193 51-266 26-324 (401)
60 PRK07850 acetyl-CoA acetyltran 99.8 6.6E-18 1.4E-22 149.3 15.0 193 52-267 27-313 (387)
61 PRK08170 acetyl-CoA acetyltran 99.8 9.7E-18 2.1E-22 150.2 15.9 192 51-266 27-334 (426)
62 PRK09352 3-oxoacyl-(acyl carri 99.8 9.1E-18 2E-22 145.6 15.2 174 50-268 51-248 (319)
63 PRK06816 3-oxoacyl-(acyl carri 99.8 1.6E-17 3.4E-22 147.0 16.4 138 50-210 62-204 (378)
64 TIGR02445 fadA fatty oxidation 99.8 7.4E-18 1.6E-22 148.9 14.1 194 51-267 25-308 (385)
65 PRK08313 acetyl-CoA acetyltran 99.8 8.4E-18 1.8E-22 148.9 14.3 195 51-267 24-285 (386)
66 PRK06157 acetyl-CoA acetyltran 99.8 1.5E-17 3.3E-22 147.8 15.9 193 51-267 27-296 (398)
67 PRK08947 fadA 3-ketoacyl-CoA t 99.8 9.4E-18 2E-22 148.5 14.4 193 52-267 28-310 (387)
68 PRK06158 thiolase; Provisional 99.8 2.3E-17 5E-22 146.1 16.5 189 51-267 28-282 (384)
69 PLN02644 acetyl-CoA C-acetyltr 99.8 2E-17 4.4E-22 146.9 16.2 193 51-267 25-319 (394)
70 PRK06366 acetyl-CoA acetyltran 99.8 1.1E-17 2.3E-22 148.4 13.5 192 51-266 26-312 (388)
71 PRK07204 3-oxoacyl-(acyl carri 99.8 9.9E-18 2.2E-22 146.0 12.7 181 49-269 50-260 (329)
72 TIGR00747 fabH 3-oxoacyl-(acyl 99.8 3.9E-17 8.5E-22 141.6 16.1 175 50-268 50-248 (318)
73 PRK06065 acetyl-CoA acetyltran 99.7 2.8E-17 6.1E-22 145.4 15.1 194 51-267 29-292 (392)
74 PRK06365 acetyl-CoA acetyltran 99.7 4.4E-17 9.5E-22 145.9 16.4 196 51-267 37-323 (430)
75 PTZ00455 3-ketoacyl-CoA thiola 99.7 2.9E-17 6.4E-22 147.0 15.2 196 51-267 48-337 (438)
76 PRK06289 acetyl-CoA acetyltran 99.7 1.5E-17 3.2E-22 148.4 12.7 197 51-267 26-304 (403)
77 cd00830 KAS_III Ketoacyl-acyl 99.7 4.8E-17 1E-21 141.1 15.7 177 49-269 48-253 (320)
78 TIGR02446 FadI fatty oxidation 99.7 4.1E-17 8.8E-22 145.9 14.6 93 51-165 31-125 (430)
79 PRK06059 lipid-transfer protei 99.7 9.6E-17 2.1E-21 143.1 16.4 196 51-267 23-301 (399)
80 PRK08142 acetyl-CoA acetyltran 99.7 6.2E-17 1.3E-21 143.0 14.4 189 51-267 25-283 (388)
81 PRK09258 3-oxoacyl-(acyl carri 99.7 1.1E-16 2.4E-21 139.9 15.4 192 51-268 61-268 (338)
82 PRK12879 3-oxoacyl-(acyl carri 99.7 3.2E-16 7E-21 136.2 15.8 179 50-268 52-254 (325)
83 cd00826 nondecarbox_cond_enzym 99.7 3.6E-16 7.7E-21 138.8 16.0 195 50-267 22-297 (393)
84 PRK06504 acetyl-CoA acetyltran 99.7 1.5E-16 3.3E-21 140.6 13.3 193 52-267 27-316 (390)
85 PRK06025 acetyl-CoA acetyltran 99.7 1.8E-16 4E-21 139.9 13.4 192 52-266 30-342 (417)
86 PRK07801 acetyl-CoA acetyltran 99.7 2.3E-16 4.9E-21 139.8 13.9 194 51-267 26-308 (382)
87 PRK09268 acetyl-CoA acetyltran 99.7 7.5E-16 1.6E-20 137.8 15.2 93 51-165 31-125 (427)
88 PRK06690 acetyl-CoA acetyltran 99.7 1.3E-15 2.8E-20 133.1 15.6 187 52-267 26-286 (361)
89 PRK07855 lipid-transfer protei 99.7 9.3E-16 2E-20 135.7 14.9 188 51-267 24-294 (386)
90 TIGR02845 spore_V_AD stage V s 99.7 1.4E-15 3.1E-20 128.0 14.4 175 51-264 50-227 (327)
91 PRK06066 acetyl-CoA acetyltran 99.7 2E-15 4.3E-20 133.0 15.0 190 51-267 25-286 (385)
92 KOG1406|consensus 99.7 5.9E-17 1.3E-21 130.6 4.5 189 53-267 31-300 (408)
93 PLN02326 3-oxoacyl-[acyl-carri 99.7 1.8E-15 3.9E-20 134.0 13.7 175 50-268 95-309 (379)
94 KOG1390|consensus 99.7 2.7E-16 5.8E-21 129.7 7.7 189 50-265 29-320 (396)
95 CHL00203 fabH 3-oxoacyl-acyl-c 99.7 3.3E-15 7.2E-20 129.9 14.9 173 50-268 50-255 (326)
96 cd00827 init_cond_enzymes "ini 99.6 9.2E-15 2E-19 127.0 13.9 175 50-268 47-251 (324)
97 PRK08257 acetyl-CoA acetyltran 99.6 1.5E-14 3.4E-19 131.6 14.6 193 51-267 27-320 (498)
98 TIGR00748 HMG_CoA_syn_Arc hydr 99.6 2.5E-14 5.4E-19 125.2 14.0 174 50-267 49-236 (345)
99 PRK08304 stage V sporulation p 99.6 3.1E-14 6.8E-19 120.2 13.4 176 51-264 56-233 (337)
100 PRK05963 3-oxoacyl-(acyl carri 99.6 4.9E-14 1.1E-18 122.6 14.8 175 50-268 51-256 (326)
101 PRK04262 hypothetical protein; 99.6 3.9E-14 8.4E-19 124.2 12.9 171 50-267 50-237 (347)
102 PRK06840 hypothetical protein; 99.6 1.1E-13 2.4E-18 121.1 15.7 174 49-266 51-264 (339)
103 PRK12880 3-oxoacyl-(acyl carri 99.6 9E-14 1.9E-18 121.9 14.6 171 50-267 59-270 (353)
104 PRK07937 lipid-transfer protei 99.5 4E-13 8.7E-18 117.3 14.0 190 51-267 24-275 (352)
105 cd00831 CHS_like Chalcone and 99.5 3.1E-13 6.8E-18 119.2 12.9 188 44-268 78-290 (361)
106 PLN03171 chalcone synthase-lik 99.5 8.8E-13 1.9E-17 117.3 15.2 133 43-210 100-235 (399)
107 PLN03172 chalcone synthase fam 99.5 1.6E-12 3.4E-17 115.3 15.7 194 40-268 91-306 (393)
108 PRK12404 stage V sporulation p 99.5 1.8E-12 3.8E-17 109.1 14.8 176 51-264 54-231 (334)
109 KOG1391|consensus 99.5 2.1E-13 4.5E-18 109.9 8.2 185 51-265 28-319 (396)
110 PLN03170 chalcone synthase; Pr 99.4 2.9E-12 6.2E-17 113.9 15.5 194 40-268 95-310 (401)
111 PLN03169 chalcone synthase fam 99.4 3.7E-12 7.9E-17 113.1 16.0 183 49-267 104-311 (391)
112 PLN03173 chalcone synthase; Pr 99.4 2.7E-12 5.9E-17 113.7 15.1 193 41-268 92-306 (391)
113 PLN03168 chalcone synthase; Pr 99.4 5.7E-12 1.2E-16 111.7 15.9 193 40-268 90-305 (389)
114 TIGR01835 HMG-CoA-S_prok 3-hyd 99.4 1.4E-11 3E-16 109.2 14.4 169 51-267 49-233 (379)
115 KOG1389|consensus 99.3 5.6E-12 1.2E-16 104.2 8.5 188 53-265 63-346 (435)
116 PLN02854 3-ketoacyl-CoA syntha 99.3 7.2E-11 1.6E-15 106.8 16.1 143 25-208 160-311 (521)
117 PLN02577 hydroxymethylglutaryl 99.3 1E-10 2.2E-15 104.9 14.3 168 50-267 52-249 (459)
118 PLN02932 3-ketoacyl-CoA syntha 99.2 1.4E-10 3.1E-15 104.2 12.5 124 49-209 146-272 (478)
119 PF00108 Thiolase_N: Thiolase, 99.2 6.4E-11 1.4E-15 99.8 8.0 98 51-170 26-125 (264)
120 PLN02377 3-ketoacyl-CoA syntha 99.1 5.3E-10 1.2E-14 101.2 12.4 119 49-208 170-295 (502)
121 COG3425 PksG 3-hydroxy-3-methy 99.1 7.4E-10 1.6E-14 95.3 12.5 167 51-268 51-238 (377)
122 PLN02192 3-ketoacyl-CoA syntha 99.1 4.7E-10 1E-14 101.4 10.1 143 25-208 148-299 (511)
123 TIGR01833 HMG-CoA-S_euk 3-hydr 99.0 7.2E-09 1.6E-13 93.0 15.0 117 50-210 49-171 (454)
124 COG0183 PaaJ Acetyl-CoA acetyl 99.0 3.4E-10 7.3E-15 100.5 4.0 57 111-167 68-126 (392)
125 PF02801 Ketoacyl-synt_C: Beta 98.9 1.7E-09 3.7E-14 80.0 4.9 56 215-270 1-56 (119)
126 PF13723 Ketoacyl-synt_2: Beta 98.9 1.6E-08 3.5E-13 82.0 10.5 117 40-166 23-146 (218)
127 KOG1392|consensus 98.9 1.4E-09 2.9E-14 89.4 3.2 93 52-166 67-161 (465)
128 PLN00415 3-ketoacyl-CoA syntha 98.8 6.4E-08 1.4E-12 86.4 11.0 120 51-209 133-258 (466)
129 PF08392 FAE1_CUT1_RppA: FAE1/ 98.7 2.2E-07 4.8E-12 77.8 11.1 125 49-210 81-208 (290)
130 PF07451 SpoVAD: Stage V sporu 98.6 3.3E-07 7.2E-12 76.4 10.8 176 51-264 51-228 (329)
131 PF00195 Chal_sti_synt_N: Chal 98.5 2.2E-07 4.7E-12 75.6 6.6 121 48-207 97-224 (226)
132 PF08545 ACP_syn_III: 3-Oxoacy 98.5 6.1E-08 1.3E-12 66.3 2.6 64 127-208 1-64 (80)
133 COG3424 BcsA Predicted naringe 98.4 3.7E-06 8.1E-11 70.1 11.0 180 49-268 74-280 (356)
134 PF01154 HMG_CoA_synt_N: Hydro 98.1 9.3E-06 2E-10 63.1 6.9 90 51-162 53-148 (174)
135 PF02803 Thiolase_C: Thiolase, 95.6 0.0068 1.5E-07 44.8 1.8 28 239-266 22-49 (123)
136 KOG1393|consensus 91.6 2.4 5.2E-05 37.3 9.9 113 51-207 60-178 (462)
137 PRK05963 3-oxoacyl-(acyl carri 81.6 1 2.2E-05 39.1 2.2 32 238-270 53-84 (326)
138 TIGR00748 HMG_CoA_syn_Arc hydr 79.1 2.4 5.3E-05 37.2 3.8 31 238-269 51-81 (345)
139 PRK08304 stage V sporulation p 78.5 1.7 3.8E-05 37.6 2.5 26 239-264 58-83 (337)
140 PRK12880 3-oxoacyl-(acyl carri 78.2 1.5 3.3E-05 38.7 2.2 28 238-265 61-88 (353)
141 PRK07204 3-oxoacyl-(acyl carri 78.1 1.5 3.3E-05 38.0 2.2 31 238-269 53-83 (329)
142 PRK06147 3-oxoacyl-(acyl carri 78.0 17 0.00038 31.9 8.8 88 53-162 234-331 (348)
143 COG0332 FabH 3-oxoacyl-[acyl-c 77.7 1.4 3.1E-05 38.2 1.9 26 239-264 54-79 (323)
144 PLN03171 chalcone synthase-lik 76.6 1.9 4.1E-05 38.7 2.4 28 241-269 112-139 (399)
145 CHL00203 fabH 3-oxoacyl-acyl-c 75.7 1.9 4.1E-05 37.5 2.1 27 238-264 52-78 (326)
146 PRK12404 stage V sporulation p 75.6 1.9 4.2E-05 37.2 2.0 26 240-265 57-82 (334)
147 TIGR02845 spore_V_AD stage V s 75.2 2.5 5.3E-05 36.6 2.5 26 239-264 52-77 (327)
148 PLN03170 chalcone synthase; Pr 75.1 2.2 4.7E-05 38.4 2.3 23 241-263 110-132 (401)
149 PLN03168 chalcone synthase; Pr 75.0 2.2 4.8E-05 38.2 2.4 23 241-263 105-127 (389)
150 PRK06840 hypothetical protein; 72.5 3 6.4E-05 36.4 2.5 27 238-264 54-80 (339)
151 PRK09258 3-oxoacyl-(acyl carri 71.5 3.7 8.1E-05 35.7 2.9 27 238-264 62-88 (338)
152 PF07451 SpoVAD: Stage V sporu 71.1 3.4 7.5E-05 35.3 2.4 25 240-264 54-78 (329)
153 cd00831 CHS_like Chalcone and 71.1 3.4 7.4E-05 36.4 2.6 29 240-269 88-116 (361)
154 PLN03173 chalcone synthase; Pr 70.5 3.3 7E-05 37.1 2.3 23 241-263 106-128 (391)
155 cd00830 KAS_III Ketoacyl-acyl 70.0 3.9 8.5E-05 35.2 2.7 31 238-269 51-81 (320)
156 PRK04262 hypothetical protein; 69.8 4 8.7E-05 35.8 2.7 31 238-269 52-82 (347)
157 PF08392 FAE1_CUT1_RppA: FAE1/ 68.8 4.1 9E-05 34.7 2.5 25 241-265 87-111 (290)
158 PLN02192 3-ketoacyl-CoA syntha 68.6 3.7 8.1E-05 38.0 2.3 25 241-265 180-204 (511)
159 PLN00415 3-ketoacyl-CoA syntha 68.2 4 8.8E-05 37.2 2.4 29 240-268 137-165 (466)
160 PLN03169 chalcone synthase fam 67.6 3.8 8.3E-05 36.7 2.2 23 241-263 110-132 (391)
161 PRK06816 3-oxoacyl-(acyl carri 67.6 4.2 9.2E-05 36.2 2.5 27 238-264 64-90 (378)
162 PRK12879 3-oxoacyl-(acyl carri 67.2 5.1 0.00011 34.6 2.8 26 238-263 54-79 (325)
163 PLN02326 3-oxoacyl-[acyl-carri 66.3 4.3 9.4E-05 36.1 2.2 27 238-264 97-123 (379)
164 PF02803 Thiolase_C: Thiolase, 65.1 25 0.00054 25.9 5.7 19 56-74 25-43 (123)
165 PLN02932 3-ketoacyl-CoA syntha 64.0 5.2 0.00011 36.8 2.3 24 241-264 152-175 (478)
166 PLN02577 hydroxymethylglutaryl 64.0 5 0.00011 36.7 2.2 31 239-270 55-85 (459)
167 PLN02377 3-ketoacyl-CoA syntha 62.9 5.9 0.00013 36.7 2.4 27 241-267 176-202 (502)
168 PRK09052 acetyl-CoA acetyltran 62.8 42 0.00091 30.2 7.9 21 54-74 298-318 (399)
169 PLN03172 chalcone synthase fam 62.7 6.2 0.00014 35.4 2.6 23 241-263 106-128 (393)
170 PRK09585 anmK anhydro-N-acetyl 61.9 11 0.00023 33.5 3.8 28 240-267 72-99 (365)
171 TIGR00747 fabH 3-oxoacyl-(acyl 61.4 8.2 0.00018 33.2 3.0 27 238-264 52-78 (318)
172 PRK09352 3-oxoacyl-(acyl carri 60.9 7.9 0.00017 33.3 2.9 30 238-268 53-82 (319)
173 PF04422 FrhB_FdhB_N: Coenzyme 60.4 16 0.00035 24.7 3.7 33 129-161 13-45 (82)
174 PRK06065 acetyl-CoA acetyltran 59.9 12 0.00025 33.6 3.8 27 238-264 30-56 (392)
175 cd00827 init_cond_enzymes "ini 59.7 7.2 0.00016 33.6 2.4 27 238-264 49-75 (324)
176 PF08541 ACP_syn_III_C: 3-Oxoa 58.9 18 0.00038 24.6 3.8 48 115-162 26-79 (90)
177 TIGR01833 HMG-CoA-S_euk 3-hydr 58.3 7.3 0.00016 35.6 2.2 31 239-270 52-82 (454)
178 PRK09051 beta-ketothiolase; Pr 57.7 7 0.00015 35.0 2.0 27 238-264 28-54 (394)
179 PRK07515 3-oxoacyl-(acyl carri 57.0 7.8 0.00017 34.3 2.2 25 240-264 98-122 (372)
180 COG0533 QRI7 Metal-dependent p 56.0 14 0.0003 32.3 3.4 30 239-268 52-82 (342)
181 PF00195 Chal_sti_synt_N: Chal 55.8 8.7 0.00019 31.6 2.1 23 241-263 104-126 (226)
182 PRK06954 acetyl-CoA acetyltran 55.4 15 0.00033 33.0 3.8 26 238-263 32-57 (397)
183 PRK06445 acetyl-CoA acetyltran 55.2 7.5 0.00016 34.8 1.8 26 238-263 33-58 (394)
184 PRK08257 acetyl-CoA acetyltran 55.1 38 0.00082 31.5 6.4 78 56-160 295-383 (498)
185 PRK13359 beta-ketoadipyl CoA t 54.7 82 0.0018 28.4 8.3 20 56-75 299-318 (400)
186 COG3360 Uncharacterized conser 54.7 8.6 0.00019 24.8 1.5 27 238-264 16-42 (71)
187 PRK05790 putative acyltransfer 54.6 73 0.0016 28.5 8.0 20 55-74 293-312 (393)
188 TIGR01930 AcCoA-C-Actrans acet 54.4 41 0.00089 30.0 6.4 78 56-160 289-374 (386)
189 PRK06158 thiolase; Provisional 52.8 9.5 0.00021 34.1 2.0 45 217-264 11-55 (384)
190 KOG2708|consensus 50.6 19 0.00041 29.7 3.1 28 241-268 53-81 (336)
191 PLN02644 acetyl-CoA C-acetyltr 50.0 72 0.0016 28.6 7.2 19 56-74 294-312 (394)
192 KOG2707|consensus 49.9 20 0.00042 31.5 3.3 25 239-263 84-108 (405)
193 PLN02854 3-ketoacyl-CoA syntha 49.8 13 0.00028 34.6 2.4 25 241-265 192-216 (521)
194 PRK07108 acetyl-CoA acetyltran 49.7 10 0.00022 34.0 1.7 28 237-264 27-54 (392)
195 PRK06690 acetyl-CoA acetyltran 49.5 81 0.0018 28.0 7.3 21 54-74 259-279 (361)
196 PF09663 Amido_AtzD_TrzD: Amid 49.4 18 0.00039 31.5 3.0 29 238-266 131-160 (365)
197 PRK06205 acetyl-CoA acetyltran 49.3 87 0.0019 28.2 7.6 20 55-74 300-319 (404)
198 PRK08170 acetyl-CoA acetyltran 48.8 10 0.00022 34.4 1.6 27 238-264 28-54 (426)
199 PRK06157 acetyl-CoA acetyltran 48.8 11 0.00024 33.8 1.8 27 237-263 27-53 (398)
200 PRK05656 acetyl-CoA acetyltran 48.3 1.1E+02 0.0024 27.4 8.1 20 55-74 293-312 (393)
201 PF14804 Jag_N: Jag N-terminus 47.0 16 0.00035 22.4 1.8 23 240-262 6-28 (52)
202 cd00751 thiolase Thiolase are 46.3 96 0.0021 27.6 7.4 20 55-74 287-306 (386)
203 PRK08242 acetyl-CoA acetyltran 44.2 15 0.00033 33.1 1.9 27 238-264 29-55 (402)
204 PRK09050 beta-ketoadipyl CoA t 44.0 85 0.0018 28.3 6.7 21 55-75 299-319 (401)
205 PF03702 UPF0075: Uncharacteri 43.3 22 0.00048 31.5 2.8 26 241-266 70-95 (364)
206 PRK13410 molecular chaperone D 43.1 26 0.00056 33.9 3.4 31 240-270 310-340 (668)
207 PRK08963 fadI 3-ketoacyl-CoA t 42.9 36 0.00078 30.9 4.2 27 238-264 30-56 (428)
208 TIGR02430 pcaF beta-ketoadipyl 42.8 85 0.0018 28.3 6.5 21 55-75 298-318 (400)
209 TIGR02714 amido_AtzD_TrzD ring 42.7 26 0.00057 30.4 3.0 28 239-266 133-161 (366)
210 TIGR01835 HMG-CoA-S_prok 3-hyd 42.4 13 0.00029 33.1 1.3 28 239-269 51-78 (379)
211 PF03990 DUF348: Domain of unk 41.4 37 0.0008 19.7 2.7 22 244-265 19-40 (43)
212 PLN02287 3-ketoacyl-CoA thiola 41.0 17 0.00038 33.2 1.8 26 238-263 72-97 (452)
213 PRK06365 acetyl-CoA acetyltran 40.7 17 0.00038 33.0 1.8 26 239-264 39-64 (430)
214 PRK09268 acetyl-CoA acetyltran 39.8 44 0.00095 30.4 4.2 27 238-264 32-58 (427)
215 PRK06633 acetyl-CoA acetyltran 39.5 20 0.00043 32.2 1.9 29 236-264 26-54 (392)
216 PRK07851 acetyl-CoA acetyltran 39.1 22 0.00047 32.1 2.1 26 238-263 28-54 (406)
217 TIGR02446 FadI fatty oxidation 38.5 49 0.0011 30.1 4.3 27 238-264 32-58 (430)
218 cd00834 KAS_I_II Beta-ketoacyl 38.3 1.5E+02 0.0032 26.4 7.4 79 52-152 274-360 (406)
219 PTZ00455 3-ketoacyl-CoA thiola 37.0 26 0.00056 32.0 2.3 27 238-264 49-77 (438)
220 COG3424 BcsA Predicted naringe 36.6 22 0.00047 30.7 1.6 24 241-264 80-103 (356)
221 PRK07937 lipid-transfer protei 36.1 1.3E+02 0.0029 26.5 6.5 27 134-160 309-335 (352)
222 TIGR03285 methan_mark_14 putat 35.9 41 0.0009 29.6 3.2 25 239-263 67-91 (445)
223 PRK06366 acetyl-CoA acetyltran 35.8 1.2E+02 0.0027 27.0 6.4 19 56-74 288-306 (388)
224 PRK13411 molecular chaperone D 35.6 34 0.00075 32.9 3.0 30 241-270 310-339 (653)
225 KOG0103|consensus 34.8 35 0.00075 32.7 2.7 30 241-270 316-345 (727)
226 TIGR03722 arch_KAE1 universal 34.8 32 0.0007 29.9 2.5 25 239-263 47-71 (322)
227 COG3425 PksG 3-hydroxy-3-methy 33.6 39 0.00084 30.1 2.7 59 205-264 17-78 (377)
228 PRK14878 UGMP family protein; 33.6 31 0.00067 30.0 2.1 24 240-263 47-70 (323)
229 PF07311 Dodecin: Dodecin; In 33.4 24 0.00052 22.9 1.1 26 239-264 14-39 (66)
230 PTZ00186 heat shock 70 kDa pre 33.1 51 0.0011 31.8 3.7 30 241-270 336-365 (657)
231 PF00814 Peptidase_M22: Glycop 32.6 67 0.0014 27.1 4.0 77 39-137 19-95 (268)
232 PRK07801 acetyl-CoA acetyltran 32.6 1.5E+02 0.0033 26.3 6.5 19 56-74 283-301 (382)
233 PF00814 Peptidase_M22: Glycop 31.8 41 0.00089 28.4 2.6 31 238-268 30-61 (268)
234 PRK07850 acetyl-CoA acetyltran 31.6 2.9E+02 0.0063 24.7 8.0 20 56-75 288-307 (387)
235 PLN03184 chloroplast Hsp70; Pr 31.0 49 0.0011 32.1 3.2 30 241-270 348-377 (673)
236 PRK08235 acetyl-CoA acetyltran 30.7 1.7E+02 0.0037 26.2 6.5 20 56-75 294-313 (393)
237 cd00829 SCP-x_thiolase Thiolas 30.6 1.8E+02 0.0039 25.6 6.6 21 54-74 252-272 (375)
238 CHL00094 dnaK heat shock prote 30.3 56 0.0012 31.3 3.5 30 241-270 311-340 (621)
239 TIGR02350 prok_dnaK chaperone 30.1 54 0.0012 31.2 3.3 32 239-270 305-336 (595)
240 TIGR00329 gcp_kae1 metallohydr 30.0 41 0.00089 29.0 2.3 30 239-268 50-80 (305)
241 PRK06025 acetyl-CoA acetyltran 30.0 1.4E+02 0.0031 27.1 5.8 19 56-74 318-336 (417)
242 PRK09185 3-oxoacyl-(acyl carri 29.9 1.5E+02 0.0033 26.4 6.0 77 54-152 261-342 (392)
243 PRK00290 dnaK molecular chaper 29.8 60 0.0013 31.1 3.6 31 240-270 308-338 (627)
244 KOG3084|consensus 29.6 48 0.001 28.7 2.5 30 234-263 222-251 (345)
245 PRK07314 3-oxoacyl-(acyl carri 29.6 2.3E+02 0.0049 25.3 7.2 20 132-151 341-360 (411)
246 COG1214 Inactive homolog of me 29.6 1.3E+02 0.0029 24.5 5.1 59 53-131 39-97 (220)
247 PF01890 CbiG_C: Cobalamin syn 29.5 54 0.0012 24.0 2.6 27 237-263 13-39 (121)
248 PRK05183 hscA chaperone protei 29.4 68 0.0015 30.7 3.9 31 240-270 310-340 (616)
249 KOG0104|consensus 29.3 55 0.0012 31.8 3.1 30 241-270 347-376 (902)
250 TIGR01991 HscA Fe-S protein as 28.6 69 0.0015 30.6 3.7 32 239-270 293-324 (599)
251 PRK08256 lipid-transfer protei 28.5 1.7E+02 0.0037 26.1 6.1 19 56-74 267-285 (391)
252 TIGR03150 fabF beta-ketoacyl-a 28.5 2.8E+02 0.0062 24.6 7.6 21 54-74 276-296 (407)
253 PRK07027 cobalamin biosynthesi 28.5 62 0.0013 23.9 2.7 28 237-264 15-42 (126)
254 PTZ00009 heat shock 70 kDa pro 28.2 60 0.0013 31.3 3.3 30 241-270 315-344 (653)
255 PTZ00400 DnaK-type molecular c 28.2 59 0.0013 31.4 3.2 30 241-270 350-379 (663)
256 cd00327 cond_enzymes Condensin 28.1 1.3E+02 0.0029 24.4 5.1 32 130-161 206-244 (254)
257 TIGR03725 bact_YeaZ universal 27.8 1.3E+02 0.0028 24.1 4.7 35 51-89 33-67 (202)
258 PRK09604 UGMP family protein; 27.4 51 0.0011 28.8 2.5 25 239-263 53-77 (332)
259 TIGR03725 bact_YeaZ universal 26.2 59 0.0013 26.0 2.5 31 238-268 34-65 (202)
260 PF13872 AAA_34: P-loop contai 25.8 36 0.00078 29.3 1.2 25 125-149 29-55 (303)
261 TIGR00329 gcp_kae1 metallohydr 24.7 2.7E+02 0.0058 23.9 6.4 43 39-87 38-80 (305)
262 PRK06501 3-oxoacyl-(acyl carri 24.4 2.1E+02 0.0046 25.9 6.0 22 53-74 289-310 (425)
263 PRK06504 acetyl-CoA acetyltran 24.4 2.2E+02 0.0047 25.5 6.0 19 56-74 291-309 (390)
264 TIGR03427 ABC_peri_uca ABC tra 24.1 81 0.0018 27.5 3.1 24 242-265 118-141 (328)
265 PTZ00340 O-sialoglycoprotein e 23.9 69 0.0015 28.2 2.6 30 239-268 51-81 (345)
266 PRK07661 acetyl-CoA acetyltran 23.9 62 0.0013 29.0 2.4 27 238-264 28-54 (391)
267 PF06277 EutA: Ethanolamine ut 23.7 60 0.0013 29.8 2.2 26 236-261 60-85 (473)
268 TIGR03723 bact_gcp putative gl 23.0 1.9E+02 0.004 25.1 5.1 71 39-131 39-109 (314)
269 cd00828 elong_cond_enzymes "el 22.7 3.5E+02 0.0076 24.0 7.0 22 53-74 274-295 (407)
270 PRK08947 fadA 3-ketoacyl-CoA t 22.1 61 0.0013 29.0 2.0 27 238-264 28-55 (387)
271 KOG1394|consensus 21.6 69 0.0015 28.4 2.1 26 49-74 297-322 (440)
272 PF09887 DUF2114: Uncharacteri 21.5 1.2E+02 0.0025 27.1 3.4 25 239-263 69-94 (448)
273 PRK11530 hypothetical protein; 21.5 40 0.00087 26.3 0.6 18 249-266 156-173 (183)
274 COG2377 Predicted molecular ch 21.4 86 0.0019 27.8 2.7 26 241-266 75-100 (371)
275 PF09663 Amido_AtzD_TrzD: Amid 21.3 96 0.0021 27.2 2.9 33 40-73 120-153 (365)
276 COG0443 DnaK Molecular chapero 21.2 1E+02 0.0022 29.3 3.3 30 241-270 292-321 (579)
277 COG2971 Predicted N-acetylgluc 21.1 1.1E+02 0.0024 26.4 3.2 26 238-263 48-73 (301)
278 COG0533 QRI7 Metal-dependent p 20.9 3.3E+02 0.0071 24.0 6.0 38 35-74 36-73 (342)
279 PF14518 Haem_oxygenas_2: Iron 20.9 52 0.0011 23.0 1.1 26 241-266 80-105 (106)
280 KOG0102|consensus 20.4 2.8E+02 0.006 26.2 5.7 93 40-159 320-413 (640)
281 PRK06519 3-oxoacyl-(acyl carri 20.3 6.4E+02 0.014 22.7 8.5 20 133-152 340-359 (398)
282 PRK14878 UGMP family protein; 20.3 3.4E+02 0.0073 23.6 6.2 72 39-132 34-105 (323)
283 PF14574 DUF4445: Domain of un 20.3 1.1E+02 0.0023 27.8 3.1 28 239-266 308-335 (412)
284 PRK05952 3-oxoacyl-(acyl carri 20.2 4.2E+02 0.0092 23.6 6.9 81 50-152 251-336 (381)
No 1
>KOG1394|consensus
Probab=100.00 E-value=3.2e-53 Score=350.69 Aligned_cols=267 Identities=19% Similarity=0.249 Sum_probs=243.9
Q ss_pred hhhhhhhcCCCcccccCCCCCC---CCCCCCCCCCCcccCCCCHHHHhhcChHHHHHHHHHHHHHHHCCCCCC---CCCC
Q psy4744 2 EFNTGVARRNCPIKIKSSHNTP---ASKLQTITKFDQTFFSLHSRLANVLDPLVRCFIEPCFEAILDAGINPK---SLAG 75 (270)
Q Consensus 2 ~~w~~l~~g~~~~~~~~~~~~~---~~~~~~~~~fd~~~~~~~~~~~~~~~~~~~l~l~a~~~Al~dAg~~~~---~~~~ 75 (270)
++|+.|.+|+++|+.+..++.+ ....+.++.|+.+.| +++...++|++..+|++.|+.+||+|+++.+. ..+.
T Consensus 43 ~~w~~Ll~GesGI~~l~~~d~k~~p~~v~g~Ip~f~~e~~-~s~~~~r~ms~~~~~al~aa~eAL~da~~~~~~~~e~dk 121 (440)
T KOG1394|consen 43 TSWRNLLSGESGISSLEGPDYKSIPFTVAGKIPRFSVEDY-VSKGDERRMSKFTKLALTAAEEALKDAGLLDVNLSEEDK 121 (440)
T ss_pred HHHHHhhccccCcccccccccccCcchheeeccccccccc-cchhhhhhhhHHHHHHHHHHHHHHHhcCCCCcccchhhh
Confidence 6899999999999988865554 367788889999987 99999999999999999999999999998654 3456
Q ss_pred CCeEEEEccCCCCccc--------cccCccccchhhHhhhhhhhHHHHHHHHcCCCCCCccccccchhHHHHHHHHHHHH
Q psy4744 76 SNSSVYTNSCISDDES--------LGCDERLTTNFWLLAHVRCLLANRIAYLFDLKGPSFTIDNSWTGGIEVLRQAVQDI 147 (270)
Q Consensus 76 ~~~gv~~g~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl~Gp~~~v~~~cas~~~al~~A~~~i 147 (270)
.++||.+|+++++... .+...+.++|++.+..+.|+.+++++..||++||+.+++++|++|..+|..|.+.|
T Consensus 122 ~~~GV~iGtgmg~l~~i~e~a~~~~~~g~rrvsPffVPkil~NM~ag~vsm~~gl~GpnhsvSTACATg~h~igda~n~I 201 (440)
T KOG1394|consen 122 EKTGVLIGTGMGDLEDIYETAQNLSEKGYRRVSPFFVPKILTNMAAGYVSMKYGLRGPNHSVSTACATGNHCIGDAFNFI 201 (440)
T ss_pred hhhceEeccccccHHHHHHHHHHHHHhcccccCccccchhhcccccchhhhhhcCcCCchhhHhhhhhccchHHHHHHHH
Confidence 7899999999998544 34467899999999999999999999999999999999999999999999999999
Q ss_pred hcCCCCEEEEeeeccccCchhHHhhhcCcccCC-----CCCCcccCCCCCceeecCeeEEEEecChHHHHhhcCceEeEE
Q psy4744 148 SEGRVDTAIVGVSNLLLNANLNSLFQGLNRLSP-----DGKTRSFDHLANGYARSEGIVVLLLQRSETALRSYGEVLHAE 222 (270)
Q Consensus 148 ~~G~~d~~lv~g~~~~~~~~~~~~~~~~~~ls~-----~~~~~pfd~~~~g~~~geGA~alvL~~~~~A~~~~g~~~~~~ 222 (270)
+.|++|++|+||+|...+|..+.+|.+..+|+. ...+||||.+|+||++|||++++|||++++|++| |+.++++
T Consensus 202 r~GdaDvmlAGgsE~~I~PlslaGF~r~RALSt~nd~P~~aSRPfD~~RdGFVmGEGagvlvlEelEHA~~R-gA~I~AE 280 (440)
T KOG1394|consen 202 RLGDADVMLAGGSEACINPLSLAGFSRARALSTRNDNPQKASRPFDKKRDGFVMGEGAGVLVLEELEHAKKR-GAPIYAE 280 (440)
T ss_pred HhCccceeeccCcceeecchhhhhHHHHHHhhhcCCCccccCCCCccCCCceeeccceeEEehHhHHHHHHc-CCceeHH
Confidence 999999999999999999999999999999984 4479999999999999999999999999999999 9999999
Q ss_pred EeccCCCCCCC--c--CCCHHHHHHHHHHHHHHcCCCCCCccEEEcccCCCC
Q psy4744 223 SRFYGSLERPF--V--GFNQASLVEFFTNFYQKARVNPGQVDFLEADGSAIK 270 (270)
Q Consensus 223 ~~~~~~~~~~~--~--~~~~~~~~~a~~~al~~agi~~~did~v~~hgtgt~ 270 (270)
+.|+|.+++.. + .|+..+...||++||++||+.|+|||||++|+|+||
T Consensus 281 ~lGygls~Da~HiT~P~~dG~Ga~~am~raL~~Agl~pe~i~YvNAHATST~ 332 (440)
T KOG1394|consen 281 VLGYGLSSDAYHITSPDPDGAGAVLAMERALKDAGLSPEDIDYVNAHATSTP 332 (440)
T ss_pred hhcCcccccccccCCCCCCcchHHHHHHHHHHHcCCChhhcCeeecccccCc
Confidence 99999887775 3 346677899999999999999999999999999997
No 2
>COG3321 Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=4.1e-51 Score=395.78 Aligned_cols=268 Identities=29% Similarity=0.447 Sum_probs=242.5
Q ss_pred hhhhhhhcCCCcccccCCCC-------------------CCCCCCCCCCCCCcccCCCCHHHHhhcChHHHHHHHHHHHH
Q psy4744 2 EFNTGVARRNCPIKIKSSHN-------------------TPASKLQTITKFDQTFFSLHSRLANVLDPLVRCFIEPCFEA 62 (270)
Q Consensus 2 ~~w~~l~~g~~~~~~~~~~~-------------------~~~~~~~~~~~fd~~~~~~~~~~~~~~~~~~~l~l~a~~~A 62 (270)
+||+.|.+|++.|+.++..+ ...+++.+++.||+.||+++|+++..||||+||+++.+++|
T Consensus 23 ~~W~~l~~g~~~i~~ip~~rwd~~~~~~~~~~~~gk~~~~~ggfl~~~~~FD~~fFgisPrEA~~mDPQqRllLe~aw~A 102 (1061)
T COG3321 23 EFWDLLKEGRDEITEVPADRWDVDAYYDPDPTVPGKSYSRWGGFLDDVDDFDALFFGISPREAEAMDPQQRLLLEVAWEA 102 (1061)
T ss_pred HHHHHHhcCCceeeecChhhhhHhhccCCccccccccccccccccCCccccCHHHcCCCHHHHHhcCchHhHHHHHHHHH
Confidence 79999999999998777543 11277888999999999999999999999999999999999
Q ss_pred HHHCCCCCCCCCCCCeEEEEccCCCCccccccCc-cccchhhHhhhhhhhHHHHHHHHcCCCCCCccccccchhHHHHHH
Q psy4744 63 ILDAGINPKSLAGSNSSVYTNSCISDDESLGCDE-RLTTNFWLLAHVRCLLANRIAYLFDLKGPSFTIDNSWTGGIEVLR 141 (270)
Q Consensus 63 l~dAg~~~~~~~~~~~gv~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~a~~ia~~~gl~Gp~~~v~~~cas~~~al~ 141 (270)
|+||||.+..+.+..+|||+|.+..+|....... ....++...++..+.+++||++.|+|+||+++|+++|||++.|++
T Consensus 103 lEdAG~~~~~l~g~~tgV~~g~~~~~y~~~~~~~~~~~~~~~~~g~~~~~~a~Risy~l~l~GPs~~vdtaCSSsLvAvh 182 (1061)
T COG3321 103 LEDAGIYPDSLRGSATGVFAGASVADYLLLLLADDEAEPEYAITGNSSSVAAGRISYVLGLSGPSVTVDTACSSSLVAVH 182 (1061)
T ss_pred HHHcCCCccccCCcceEEEEeeccCccccccccccccccceecccchhhHHHHHHHHHhcCCCCCccccchhhHHHHHHH
Confidence 9999999999999999999999999988753211 145556667778889999999999999999999999999999999
Q ss_pred HHHHHHhcCCCCEEEEeeeccccCchhHHhhhcCcccCCCCCCcccCCCCCceeecCeeEEEEecChHHHHhhcCceEeE
Q psy4744 142 QAVQDISEGRVDTAIVGVSNLLLNANLNSLFQGLNRLSPDGKTRSFDHLANGYARSEGIVVLLLQRSETALRSYGEVLHA 221 (270)
Q Consensus 142 ~A~~~i~~G~~d~~lv~g~~~~~~~~~~~~~~~~~~ls~~~~~~pfd~~~~g~~~geGA~alvL~~~~~A~~~~g~~~~~ 221 (270)
+||++|++|+||++|+||++...+|.....|.+.++|++++.|++||++.+|++.|||++++||+++++|++. |..+|+
T Consensus 183 lA~~sL~~Ge~d~alaGgv~l~~~p~~~~~~~~~g~ls~~g~c~~fd~~adG~v~geG~g~vvLKrl~~A~~d-gd~Iya 261 (1061)
T COG3321 183 LACQSLRLGECDLALAGGVNLVLSPESSYLFSAGGMLSPDGRCKAFDADADGYVRGEGAGVVVLKRLSDAERD-GDRIYA 261 (1061)
T ss_pred HHHHHHHcCCCCEEEecceEeccCCcceeeeecccCcCCCCcceecccCCCCEEEeeeEEEEEEEEhHHHHhC-CCeEEE
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999986 666766
Q ss_pred EEeccCCCCC----CCcCCCHHHHHHHHHHHHHHcCCCCCCccEEEcccCCCC
Q psy4744 222 ESRFYGSLER----PFVGFNQASLVEFFTNFYQKARVNPGQVDFLEADGSAIK 270 (270)
Q Consensus 222 ~~~~~~~~~~----~~~~~~~~~~~~a~~~al~~agi~~~did~v~~hgtgt~ 270 (270)
.+.+.+.+.+ +++.|+..++.++++++|+++||+|++|+|||+|||||+
T Consensus 262 vI~gsavn~dG~~~gltaP~~~aQ~~v~~~al~~a~i~p~tv~yvEaHgTGT~ 314 (1061)
T COG3321 262 VIRGSAVNQDGRSNGLTAPNLEAQADVIREALADAGIDPATVQYVEAHGTGTP 314 (1061)
T ss_pred EEEeeeeccCCCcCCCCCCCHHHHHHHHHHHHHhcCCCcccCcEEEecCCCCC
Confidence 6665554433 579999999999999999999999999999999999996
No 3
>PRK08722 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=100.00 E-value=1.9e-50 Score=359.53 Aligned_cols=267 Identities=17% Similarity=0.235 Sum_probs=235.8
Q ss_pred hhhhhhhcCCCcccccCCCCC---CCCCCCCCCCCCcccCCCCHHHHhhcChHHHHHHHHHHHHHHHCCCCCCCCCCCCe
Q psy4744 2 EFNTGVARRNCPIKIKSSHNT---PASKLQTITKFDQTFFSLHSRLANVLDPLVRCFIEPCFEAILDAGINPKSLAGSNS 78 (270)
Q Consensus 2 ~~w~~l~~g~~~~~~~~~~~~---~~~~~~~~~~fd~~~~~~~~~~~~~~~~~~~l~l~a~~~Al~dAg~~~~~~~~~~~ 78 (270)
|||++|.+|++.++..+.++. ...+.+.+++||++.| +++++.+.|++++++++.++++||+|||++....+..++
T Consensus 23 ~~w~~L~~g~s~i~~~~~~~~~~~~~~~~g~i~~~~~~~~-~~~~~~~~~d~~~~~~l~a~~~Al~dAGl~~~~~~~~r~ 101 (414)
T PRK08722 23 SSWKALLAGQSGIVNIEHFDTTNFSTRFAGLVKDFNCEEY-MSKKDARKMDLFIQYGIAAGIQALDDSGLEVTEENAHRI 101 (414)
T ss_pred HHHHHHHhCCCeeeecCccccccCCCceeEEcCCCChhHc-CCHHHHhhcCHHHHHHHHHHHHHHHHcCCCccccCCCCE
Confidence 799999999999987664433 2344556778999988 899999999999999999999999999998777778899
Q ss_pred EEEEccCCCCcccc--------ccCccccchhhHhhhhhhhHHHHHHHHcCCCCCCccccccchhHHHHHHHHHHHHhcC
Q psy4744 79 SVYTNSCISDDESL--------GCDERLTTNFWLLAHVRCLLANRIAYLFDLKGPSFTIDNSWTGGIEVLRQAVQDISEG 150 (270)
Q Consensus 79 gv~~g~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl~Gp~~~v~~~cas~~~al~~A~~~i~~G 150 (270)
||++|++.+++... +...+.++|+.++..+.+.+++++++.||++||+++|+++|+|++.||..|+++|++|
T Consensus 102 Gv~vGt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~gl~Gp~~ti~~aCas~~~Al~~A~~~i~~G 181 (414)
T PRK08722 102 GVAIGSGIGGLGLIEAGHQALVEKGPRKVSPFFVPSTIVNMIAGNLSIMRGLRGPNIAISTACTTGLHNIGHAARMIAYG 181 (414)
T ss_pred EEEEeeCCCcchhHHHHHHHHHhcCcccCCchhcccccccHHHHHHHHHhCCCCCccccccccHHHHHHHHHHHHHHHcC
Confidence 99999998875432 2344567788899999999999999999999999999999999999999999999999
Q ss_pred CCCEEEEeeeccccCchhHHhhhcCcccC-----CCCCCcccCCCCCceeecCeeEEEEecChHHHHhhcCceEeEEEec
Q psy4744 151 RVDTAIVGVSNLLLNANLNSLFQGLNRLS-----PDGKTRSFDHLANGYARSEGIVVLLLQRSETALRSYGEVLHAESRF 225 (270)
Q Consensus 151 ~~d~~lv~g~~~~~~~~~~~~~~~~~~ls-----~~~~~~pfd~~~~g~~~geGA~alvL~~~~~A~~~~g~~~~~~~~~ 225 (270)
++|++||+|+|...++..+..|..++.++ |+..|||||.+++|+++|||++++|||++++|+++ |..+++.+.+
T Consensus 182 ~~d~~lvgg~d~~~~~~~~~~f~~~~~ls~~~~~p~~~~rpfd~~~~G~~~gEGaaalvLe~~~~A~~~-g~~i~a~i~g 260 (414)
T PRK08722 182 DADAMVAGGAEKASTPLGMAGFGAAKALSTRNDEPQKASRPWDKDRDGFVLGDGAGMMVLEEYEHAKAR-GAKIYAELVG 260 (414)
T ss_pred CCCEEEEecccccCCHHHHHHHHHcCCcccCCCCCccccCcCcCCCCceEeeceEEEEEEccHHHHHHC-CCeEEEEEEE
Confidence 99999999999988999999999999987 45689999999999999999999999999999988 8999999999
Q ss_pred cCCCCCCC--cCC--CHHHHHHHHHHHHHHcCCCCCCccEEEcccCCCC
Q psy4744 226 YGSLERPF--VGF--NQASLVEFFTNFYQKARVNPGQVDFLEADGSAIK 270 (270)
Q Consensus 226 ~~~~~~~~--~~~--~~~~~~~a~~~al~~agi~~~did~v~~hgtgt~ 270 (270)
++...++. ..| ...+..++|+++|+++||+|+||||||+|||||+
T Consensus 261 ~~~~~d~~~~~~p~~~~~~~~~a~~~Al~~agi~~~did~ie~hgtgt~ 309 (414)
T PRK08722 261 FGMSGDAYHMTSPSEDGSGGALAMEAAMRDAGVTGEQIGYVNAHGTSTP 309 (414)
T ss_pred EEEcCCCCCCCCCCcchHHHHHHHHHHHHHcCCCHHHcCEEEccCccCC
Confidence 88765543 344 4556799999999999999999999999999996
No 4
>PLN02787 3-oxoacyl-[acyl-carrier-protein] synthase II
Probab=100.00 E-value=1.5e-50 Score=367.12 Aligned_cols=267 Identities=18% Similarity=0.229 Sum_probs=234.1
Q ss_pred hhhhhhhcCCCcccccCCCC---CCCCCCCCCCCCCcccCCCCHHHHhhcChHHHHHHHHHHHHHHHCCCCCC---CCCC
Q psy4744 2 EFNTGVARRNCPIKIKSSHN---TPASKLQTITKFDQTFFSLHSRLANVLDPLVRCFIEPCFEAILDAGINPK---SLAG 75 (270)
Q Consensus 2 ~~w~~l~~g~~~~~~~~~~~---~~~~~~~~~~~fd~~~~~~~~~~~~~~~~~~~l~l~a~~~Al~dAg~~~~---~~~~ 75 (270)
+||++|.+|++.|+.++.++ ++..+.++++.|+++.+ +++++.++|++++++++.++++||+|||++++ .++.
T Consensus 148 ~~w~~L~~G~s~i~~~~~f~~~~~~~~~ag~i~~f~~~~~-l~~k~~r~md~~~~~al~Aa~eAL~dAGl~~~~~~~~~~ 226 (540)
T PLN02787 148 VFYNNLLEGVSGISEIERFDCSQFPTRIAGEIKSFSTDGW-VAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMKELDK 226 (540)
T ss_pred HHHHHHHcCCCcccccCccchhhCCccccccccccChhhc-CCHHHHHhCCHHHHHHHHHHHHHHHHcCCCcccccccCC
Confidence 79999999999998776543 23355567778888876 89999999999999999999999999999754 5677
Q ss_pred CCeEEEEccCCCCcccc-------ccCccccchhhHhhhhhhhHHHHHHHHcCCCCCCccccccchhHHHHHHHHHHHHh
Q psy4744 76 SNSSVYTNSCISDDESL-------GCDERLTTNFWLLAHVRCLLANRIAYLFDLKGPSFTIDNSWTGGIEVLRQAVQDIS 148 (270)
Q Consensus 76 ~~~gv~~g~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl~Gp~~~v~~~cas~~~al~~A~~~i~ 148 (270)
.++||++|+..++...+ ......++|+.++..+.+..+.+++..||++||+++|+++|+|++.||..|+++|+
T Consensus 227 ~r~GV~vGt~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~~gl~Gp~~tistACASs~~Ai~~A~~~Ir 306 (540)
T PLN02787 227 TKCGVLIGSAMGGMKVFNDAIEALRISYRKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANHII 306 (540)
T ss_pred CceEEEEEeccchHHHHHHHHHHHhhccccCCcchhhhhcccHHHHHHHHHhCCCCCccccccccccHHHHHHHHHHHHH
Confidence 89999999998764322 12334567777888888899999999999999999999999999999999999999
Q ss_pred cCCCCEEEEeeeccccCchhHHhhhcCcccC-----CCCCCcccCCCCCceeecCeeEEEEecChHHHHhhcCceEeEEE
Q psy4744 149 EGRVDTAIVGVSNLLLNANLNSLFQGLNRLS-----PDGKTRSFDHLANGYARSEGIVVLLLQRSETALRSYGEVLHAES 223 (270)
Q Consensus 149 ~G~~d~~lv~g~~~~~~~~~~~~~~~~~~ls-----~~~~~~pfd~~~~g~~~geGA~alvL~~~~~A~~~~g~~~~~~~ 223 (270)
+|++|++||+|+|....|..+..|..++.|+ ++..|||||.+++|+++||||+++|||++++|+++ |..+++.+
T Consensus 307 ~G~aD~aLvGG~d~~l~p~~~~~f~~~~aLS~~~~~p~~~~rPFD~~rdGfv~GEGAa~lVLE~~e~A~~r-Ga~IyA~I 385 (540)
T PLN02787 307 RGEADVMLCGGSDAAIIPIGLGGFVACRALSQRNDDPTKASRPWDMNRDGFVMGEGAGVLLLEELEHAKKR-GANIYAEF 385 (540)
T ss_pred cCCCCEEEEeccccccCHHHHHHHHHHHHhhccCCCcccccCCcccCCCCcccccceEEEEEeeHHHHHHC-CCeeEEEE
Confidence 9999999999999989999999999988887 55689999999999999999999999999999999 99999999
Q ss_pred eccCCCCCCC--c--CCCHHHHHHHHHHHHHHcCCCCCCccEEEcccCCCC
Q psy4744 224 RFYGSLERPF--V--GFNQASLVEFFTNFYQKARVNPGQVDFLEADGSAIK 270 (270)
Q Consensus 224 ~~~~~~~~~~--~--~~~~~~~~~a~~~al~~agi~~~did~v~~hgtgt~ 270 (270)
.+++..+++. + .|+..++.++|++||+++|++|+||||||+|||||+
T Consensus 386 ~G~g~s~Da~~~t~p~p~g~g~~~am~~AL~~AGl~p~dIdyInaHGTGT~ 436 (540)
T PLN02787 386 LGGSFTCDAYHMTEPHPEGAGVILCIEKALAQSGVSKEDVNYINAHATSTK 436 (540)
T ss_pred EEEEEecCCCCCCCCCcCHHHHHHHHHHHHHHcCCCHHHCcEEEccCccCC
Confidence 9988766554 3 345677899999999999999999999999999996
No 5
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.
Probab=100.00 E-value=5.4e-50 Score=409.29 Aligned_cols=266 Identities=19% Similarity=0.208 Sum_probs=234.1
Q ss_pred hhhhhhhcCCCcccccCCCCC-------------------CCCCCCCCCCCCcccCCCCHHHHhhcChHHHHHHHHHHHH
Q psy4744 2 EFNTGVARRNCPIKIKSSHNT-------------------PASKLQTITKFDQTFFSLHSRLANVLDPLVRCFIEPCFEA 62 (270)
Q Consensus 2 ~~w~~l~~g~~~~~~~~~~~~-------------------~~~~~~~~~~fd~~~~~~~~~~~~~~~~~~~l~l~a~~~A 62 (270)
+||++|.+|++.|+.++..++ ..+++.++ +||+.+|++++++++.|||+++|+++++++|
T Consensus 26 ~fW~~L~~G~~~i~~ip~~rw~~~~~~~~~~~~~~~~~~~~ggfl~~v-~FD~~~F~i~p~ea~~mDpqqrl~L~~a~eA 104 (2582)
T TIGR02813 26 KFWDLIFEKIDAITDVPSDHWAKDDYYDSDKSEADKSYCKRGGFLPEV-DFNPMEFGLPPNILELTDISQLLSLVVAKEV 104 (2582)
T ss_pred HHHHHHHcCCCccCCCChhhCChhhccCccccccCCcccceeEecCcc-CCCHhhcCCCHHHHHhcCHHHHHHHHHHHHH
Confidence 799999999999987653221 11556666 4999999999999999999999999999999
Q ss_pred HHHCCCCCCCCCCCCeEEEEccCCCCccccc--------------------------------cCccccchhhHhhhhhh
Q psy4744 63 ILDAGINPKSLAGSNSSVYTNSCISDDESLG--------------------------------CDERLTTNFWLLAHVRC 110 (270)
Q Consensus 63 l~dAg~~~~~~~~~~~gv~~g~~~~~~~~~~--------------------------------~~~~~~~~~~~~~~~~~ 110 (270)
|+|||+.. .+++.++||++|++.+++.... .......+..+++.+.|
T Consensus 105 LedAG~~~-~~~~~r~GV~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~n 183 (2582)
T TIGR02813 105 LNDAGLPD-GYDRDKIGITLGVGGGQKQSSSLNARLQYPVLKKVFKASGVEDEDSEMLIKKFQDQYIHWEENSFPGSLGN 183 (2582)
T ss_pred HHhCCCCC-CCCCCCEEEEEEECCCcccchhhhhhhcchhhhhhhhccccchhhHHHhhhhhcccccccCcccccccccc
Confidence 99999964 4788999999998876532100 00011234456788889
Q ss_pred hHHHHHHHHcCCCCCCccccccchhHHHHHHHHHHHHhcCCCCEEEEeeeccccCchhHHhhhcCcccCCCCCCcccCCC
Q psy4744 111 LLANRIAYLFDLKGPSFTIDNSWTGGIEVLRQAVQDISEGRVDTAIVGVSNLLLNANLNSLFQGLNRLSPDGKTRSFDHL 190 (270)
Q Consensus 111 ~~a~~ia~~~gl~Gp~~~v~~~cas~~~al~~A~~~i~~G~~d~~lv~g~~~~~~~~~~~~~~~~~~ls~~~~~~pfd~~ 190 (270)
.++++|++.|||+||+++|+++|+||+.||+.|+++|++|+||++||||++...++..+..|.+++++++++.|||||.+
T Consensus 184 ~~A~RIS~~f~L~Gps~tVdtACsSSL~Al~~A~~~L~~G~~D~alvGGv~~~~~p~~~~~fs~~~~lS~~g~crpFD~~ 263 (2582)
T TIGR02813 184 VISGRIANRFDLGGMNCVVDAACAGSLAAIRMALSELLEGRSEMMITGGVCTDNSPFMYMSFSKTPAFTTNEDIQPFDID 263 (2582)
T ss_pred HHHHHHHHHhCCCCCcccccchhHHHHHHHHHHHHHHHcCCCCEEEEecceeeCCHHHHHHHHhccCcCCCCCccCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCceeecCeeEEEEecChHHHHhhcCceEeEEEeccCCCCCC----CcCCCHHHHHHHHHHHHHHcCCCCCCccEEEccc
Q psy4744 191 ANGYARSEGIVVLLLQRSETALRSYGEVLHAESRFYGSLERP----FVGFNQASLVEFFTNFYQKARVNPGQVDFLEADG 266 (270)
Q Consensus 191 ~~g~~~geGA~alvL~~~~~A~~~~g~~~~~~~~~~~~~~~~----~~~~~~~~~~~a~~~al~~agi~~~did~v~~hg 266 (270)
++|+++|||++++|||++++|+++ |..+|+.+.|++.++++ ++.|+..++.++|++||++||++|+||+|||+||
T Consensus 264 adG~v~GEGag~vvLkrL~dA~~d-Gd~IyAvI~G~g~~~DG~~~~itaP~~~gq~~~i~~Al~~Agi~p~~I~yIeaHG 342 (2582)
T TIGR02813 264 SKGMMIGEGIGMMALKRLEDAERD-GDRIYAVIKGVGASSDGKFKSIYAPRPEGQAKALKRAYDDAGFAPHTCGLIEAHG 342 (2582)
T ss_pred CCcccccceEEEEEeCcHHHHHhC-CCcEEEEEEEEEEcCCCCCCCCcCCCHHHHHHHHHHHHHHcCCCHHHCCEEEecC
Confidence 999999999999999999999998 99999999998877665 3789999999999999999999999999999999
Q ss_pred CCCC
Q psy4744 267 SAIK 270 (270)
Q Consensus 267 tgt~ 270 (270)
|||+
T Consensus 343 TGT~ 346 (2582)
T TIGR02813 343 TGTA 346 (2582)
T ss_pred CCCC
Confidence 9996
No 6
>cd00832 CLF Chain-length factor (CLF) is a factor required for polyketide chain initiation of aromatic antibiotic-producing polyketide synthases (PKSs) of filamentous bacteria. CLFs have been shown to have decarboxylase activity towards malonyl-acyl carrier protein (ACP). CLFs are similar to other elongation ketosynthase domains, but their active site cysteine is replaced by a conserved glutamine.
Probab=100.00 E-value=2.1e-49 Score=351.79 Aligned_cols=266 Identities=22% Similarity=0.238 Sum_probs=234.4
Q ss_pred hhhhhhhcCCCcccccCCCC---CCCCCCCCCCCCCcccCCCCHHHHhhcChHHHHHHHHHHHHHHHCCCCCCCCCCCCe
Q psy4744 2 EFNTGVARRNCPIKIKSSHN---TPASKLQTITKFDQTFFSLHSRLANVLDPLVRCFIEPCFEAILDAGINPKSLAGSNS 78 (270)
Q Consensus 2 ~~w~~l~~g~~~~~~~~~~~---~~~~~~~~~~~fd~~~~~~~~~~~~~~~~~~~l~l~a~~~Al~dAg~~~~~~~~~~~ 78 (270)
+||++|.+|+++++..+.+. ++.....+++.||++++ +++++.+.|+++++|++.++++||+|||+++..++..++
T Consensus 20 ~~w~~L~~G~s~i~~~~~~~~~~~~~~~~g~i~~~~~~~~-~~~~~~~~~d~~~~~~l~aa~eAl~dAGl~~~~~~~~r~ 98 (399)
T cd00832 20 EYWKAVLDGRSGLGPITRFDPSGYPARLAGEVPDFDAAEH-LPGRLLPQTDRMTRLALAAADWALADAGVDPAALPPYDM 98 (399)
T ss_pred HHHHHHHhCCCeEeeCCccccccCCCceeEEeCCcChhhc-CCHHHHhhCCHHHHHHHHHHHHHHHHcCCCccccCCCce
Confidence 79999999999998766443 22234456777888874 999999999999999999999999999998888888999
Q ss_pred EEEEccCCCCccc--------cccCccccchhhHhhhhhhhHHHHHHHHcCCCCCCccccccchhHHHHHHHHHHHHhcC
Q psy4744 79 SVYTNSCISDDES--------LGCDERLTTNFWLLAHVRCLLANRIAYLFDLKGPSFTIDNSWTGGIEVLRQAVQDISEG 150 (270)
Q Consensus 79 gv~~g~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl~Gp~~~v~~~cas~~~al~~A~~~i~~G 150 (270)
||++|++.+++.. .........++.++..+.+.++++|+..||++||+++++++|+|++.||..|+++|++|
T Consensus 99 Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl~Gp~~ti~~acaS~~~Al~~A~~~i~~G 178 (399)
T cd00832 99 GVVTASAAGGFEFGQRELQKLWSKGPRHVSAYQSFAWFYAVNTGQISIRHGMRGPSGVVVAEQAGGLDALAQARRLVRRG 178 (399)
T ss_pred EEEEccCCccHHHHHHHHHHHHhcCccccChhhhhhhhhhHHHHHHHHHhCCCCCcccccchhHHHHHHHHHHHHHHHcC
Confidence 9999998887532 22234556777788888889999999999999999999999999999999999999999
Q ss_pred CCCEEEEeeeccccCchhHHhhhcCcccCC----CCCCcccCCCCCceeecCeeEEEEecChHHHHhhcCceEeEEEecc
Q psy4744 151 RVDTAIVGVSNLLLNANLNSLFQGLNRLSP----DGKTRSFDHLANGYARSEGIVVLLLQRSETALRSYGEVLHAESRFY 226 (270)
Q Consensus 151 ~~d~~lv~g~~~~~~~~~~~~~~~~~~ls~----~~~~~pfd~~~~g~~~geGA~alvL~~~~~A~~~~g~~~~~~~~~~ 226 (270)
+ |++||+|+|..++|..+..|..++.++. ...|||||++++|+++|||++++|||++++|+++ |..+++.+.++
T Consensus 179 ~-d~~i~gg~d~~~~p~~~~~~~~~~~ls~~~~p~~~~rPFd~~~~G~~~gEGa~~lvLe~~~~A~~r-g~~i~a~i~g~ 256 (399)
T cd00832 179 T-PLVVSGGVDSALCPWGWVAQLSSGRLSTSDDPARAYLPFDAAAAGYVPGEGGAILVLEDAAAARER-GARVYGEIAGY 256 (399)
T ss_pred C-CeEEEEeeccccCHHHHHHHHhccccCCCCCCCCCcCCCcCCCCCEeeeceEEEEEEeeHHHHHHC-CCeEEEEEEeE
Confidence 9 9999999999999999999999998874 3479999999999999999999999999999999 99999999999
Q ss_pred CCCCCCCc-CCCHHHHHHHHHHHHHHcCCCCCCccEEEcccCCCC
Q psy4744 227 GSLERPFV-GFNQASLVEFFTNFYQKARVNPGQVDFLEADGSAIK 270 (270)
Q Consensus 227 ~~~~~~~~-~~~~~~~~~a~~~al~~agi~~~did~v~~hgtgt~ 270 (270)
+...++.. .++..++.++|+++|+++|++|+|||||++|||||+
T Consensus 257 ~~~~d~~~~~~~~~~~~~a~~~al~~ag~~~~~i~~v~~hgtgt~ 301 (399)
T cd00832 257 AATFDPPPGSGRPPGLARAIRLALADAGLTPEDVDVVFADAAGVP 301 (399)
T ss_pred EEcCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHccEEEeccCcCC
Confidence 98766543 235788999999999999999999999999999996
No 7
>PRK06333 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=100.00 E-value=6.8e-49 Score=352.45 Aligned_cols=267 Identities=19% Similarity=0.274 Sum_probs=231.9
Q ss_pred hhhhhhhcCCCcccccCCCCCCC---CCCCCCC--------CCCcccCCCCHHHHhhcChHHHHHHHHHHHHHHHCCCCC
Q psy4744 2 EFNTGVARRNCPIKIKSSHNTPA---SKLQTIT--------KFDQTFFSLHSRLANVLDPLVRCFIEPCFEAILDAGINP 70 (270)
Q Consensus 2 ~~w~~l~~g~~~~~~~~~~~~~~---~~~~~~~--------~fd~~~~~~~~~~~~~~~~~~~l~l~a~~~Al~dAg~~~ 70 (270)
+||++|++|++.++..+.+.... ...+.++ .||+++| +++++.+.|+|+++|++.++++||+|+|+++
T Consensus 23 ~~w~~l~~G~s~i~~~~~~~~~~~~~~~~g~i~~~~~~~~~~fd~~~~-i~~~~~~~~d~~~~l~~~aa~~Al~dAgl~~ 101 (424)
T PRK06333 23 TFWQRLLAGQSGIRTLTDFPVGDLATKIGGQVPDLAEDAEAGFDPDRY-LDPKDQRKMDRFILFAMAAAKEALAQAGWDP 101 (424)
T ss_pred HHHHHHHcCCCeEEeCCcccccCCCCceEEEeccccccccccCChhHc-CCHHHHhhcCHHHHHHHHHHHHHHHhcCCCc
Confidence 79999999999998777544321 2222232 3999988 9999999999999999999999999999988
Q ss_pred CCC-CCCCeEEEEccCCCCcccc--------ccCccccchhhHhhhhhhhHHHHHHHHcCCCCCCccccccchhHHHHHH
Q psy4744 71 KSL-AGSNSSVYTNSCISDDESL--------GCDERLTTNFWLLAHVRCLLANRIAYLFDLKGPSFTIDNSWTGGIEVLR 141 (270)
Q Consensus 71 ~~~-~~~~~gv~~g~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl~Gp~~~v~~~cas~~~al~ 141 (270)
.++ +..++||++|++.+++... ......+.|+.++..+.|.++++|++.||++||+++|+++|+||+.||.
T Consensus 102 ~~~~~~~~~Gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl~Gp~~~v~~aCaSg~~Al~ 181 (424)
T PRK06333 102 DTLEDRERTATIIGSGVGGFPAIAEAVRTLDSRGPRRLSPFTIPSFLTNMAAGHVSIRYGFKGPLGAPVTACAAGVQAIG 181 (424)
T ss_pred cccCCcccEEEEEecCcccHHHHHHHHHHHHhcCCcccChhHHhhhhhhHHHHHHHHHhCCCCCCccccchhHHHHHHHH
Confidence 777 7789999999988775432 2234456778888899999999999999999999999999999999999
Q ss_pred HHHHHHhcCCCCEEEEeeeccccCchhHHhhhcCcccC------CCCCCcccCCCCCceeecCeeEEEEecChHHHHhhc
Q psy4744 142 QAVQDISEGRVDTAIVGVSNLLLNANLNSLFQGLNRLS------PDGKTRSFDHLANGYARSEGIVVLLLQRSETALRSY 215 (270)
Q Consensus 142 ~A~~~i~~G~~d~~lv~g~~~~~~~~~~~~~~~~~~ls------~~~~~~pfd~~~~g~~~geGA~alvL~~~~~A~~~~ 215 (270)
.|+++|++|++|++||+|+|..+++.....|..++.++ ++..|||||.+++|+++||||+++|||++++|+++
T Consensus 182 ~A~~~I~~G~~d~alvgG~e~~~~~~~~~~f~~~~~l~~~~~~~p~~~~~Pfd~~~~G~~~gEGaa~lvLe~~~~A~~r- 260 (424)
T PRK06333 182 DAARLIRSGEADVAVCGGTEAAIDRVSLAGFAAARALSTRFNDAPEQASRPFDRDRDGFVMGEGAGILVIETLEHALAR- 260 (424)
T ss_pred HHHHHHHcCCCCEEEEeeecccCCHHHHHHHHHcccccccCCCCCCcCCCCCCCCCCCeEEecceEEEEEeeHHHHHHC-
Confidence 99999999999999999999988888888888888776 34689999999999999999999999999999988
Q ss_pred CceEeEEEeccCCCCCCC--c--CCCHHHHHHHHHHHHHHcCCCCCCccEEEcccCCCC
Q psy4744 216 GEVLHAESRFYGSLERPF--V--GFNQASLVEFFTNFYQKARVNPGQVDFLEADGSAIK 270 (270)
Q Consensus 216 g~~~~~~~~~~~~~~~~~--~--~~~~~~~~~a~~~al~~agi~~~did~v~~hgtgt~ 270 (270)
|..+++.+.+++..+++. + .|+..++.++|++||++||++|+||||||+|||||+
T Consensus 261 g~~i~a~i~G~~~~~d~~~~~~~~~~~~~~~~a~~~Al~~Agi~p~dId~i~~hgtgt~ 319 (424)
T PRK06333 261 GAPPLAELVGYGTSADAYHMTAGPEDGEGARRAMLIALRQAGIPPEEVQHLNAHATSTP 319 (424)
T ss_pred CCeEEEEEEEEEEcCCCCCCCCCCCCcHHHHHHHHHHHHHcCCCHHHCCEEeccCCCCc
Confidence 889999999998765543 2 345678999999999999999999999999999996
No 8
>COG0304 FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=8.6e-49 Score=343.23 Aligned_cols=264 Identities=21% Similarity=0.306 Sum_probs=232.4
Q ss_pred hhhhhhhcCCCcccccCCCCCC---CCCCCCCCCCCcccCCCCHHHHhhcChHHHHHHHHHHHHHHHCCCCCCCCCCC-C
Q psy4744 2 EFNTGVARRNCPIKIKSSHNTP---ASKLQTITKFDQTFFSLHSRLANVLDPLVRCFIEPCFEAILDAGINPKSLAGS-N 77 (270)
Q Consensus 2 ~~w~~l~~g~~~~~~~~~~~~~---~~~~~~~~~fd~~~~~~~~~~~~~~~~~~~l~l~a~~~Al~dAg~~~~~~~~~-~ 77 (270)
++|++|..|++++..+..+... ....++++.| ..+ +++++.++|++..+|++.|+.+||+|||+. .+.... +
T Consensus 22 ~~~~~l~~g~sgi~~~~~~~~~~~~~~~~~~i~~~--~~~-~~~~~~~~~d~~~~~a~~Aa~eAl~dAgl~-~~~~~~~r 97 (412)
T COG0304 22 EVWAALLAGKSGIRPITRFDASGLGVKIAGEIKDL--DDQ-IAKKERRFMDRFSQLAVVAAVEALEDAGLD-NELNVDMR 97 (412)
T ss_pred HHHHHHhcCCCCCCccccccccCCCCccccccccc--ccc-cchHHhhcccHHHHHHHHHHHHHHHHcCCC-cccccCcc
Confidence 6899999999988866654443 2445667766 333 678888899999999999999999999997 333333 9
Q ss_pred eEEEEccCCCCccccc--------cC-ccccchhhHhhhhhhhHHHHHHHHcCCCCCCccccccchhHHHHHHHHHHHHh
Q psy4744 78 SSVYTNSCISDDESLG--------CD-ERLTTNFWLLAHVRCLLANRIAYLFDLKGPSFTIDNSWTGGIEVLRQAVQDIS 148 (270)
Q Consensus 78 ~gv~~g~~~~~~~~~~--------~~-~~~~~~~~~~~~~~~~~a~~ia~~~gl~Gp~~~v~~~cas~~~al~~A~~~i~ 148 (270)
+|+++|++.++...++ .. .+.++|+.++..+++..+..++..||++||++++.++|+||..||..|+++|+
T Consensus 98 ~gv~iGsg~gg~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~vs~~~g~~G~~~~~~tACatg~~AIg~A~~~I~ 177 (412)
T COG0304 98 VGVAIGSGIGGLEDIEFDLDALLLEGLRKRISPFLVPKMLPNLAAGNVAIVFGLKGPNYTPVTACATGAHAIGDAVRLIR 177 (412)
T ss_pred EEEEEeccCCCcchhhhHHHHHHhcCCccCcCchhhhhhccchHHHHHHHHhCCCCCcCChhhhHHhHHHHHHHHHHHHH
Confidence 9999999999877432 22 33489999999999999999999999999999999999999999999999999
Q ss_pred cCCCCEEEEeeeccccCchhHHhhhcCcccCCC-----CCCcccCCCCCceeecCeeEEEEecChHHHHhhcCceEeEEE
Q psy4744 149 EGRVDTAIVGVSNLLLNANLNSLFQGLNRLSPD-----GKTRSFDHLANGYARSEGIVVLLLQRSETALRSYGEVLHAES 223 (270)
Q Consensus 149 ~G~~d~~lv~g~~~~~~~~~~~~~~~~~~ls~~-----~~~~pfd~~~~g~~~geGA~alvL~~~~~A~~~~g~~~~~~~ 223 (270)
.|++|++||||+|...++.....|..+++|+.+ ..|||||++|+||++|||++++|||++++|++| |+.+|+++
T Consensus 178 ~G~ad~~iaGG~e~~i~~~~i~gF~am~Alst~nd~p~~asrPfd~~RdGfv~gEGag~lVLE~~ehA~aR-GA~Iyaei 256 (412)
T COG0304 178 LGKADVVIAGGAEAAITPLGIAGFEAMRALSTRNDDPEKASRPFDKNRDGFVIGEGAGALVLEELEHALAR-GAKIYAEI 256 (412)
T ss_pred cCCCCEEEEcccccccCHHHHHHHHHHHHhccCCCCccccCCCCCCCCCCEEEecceeEEEecChhhHHhC-CCceEEEE
Confidence 999999999999999999999999999999854 589999999999999999999999999999999 99999999
Q ss_pred eccCCCCCCC--cCC--CHHHHHHHHHHHHHHcCCCCCCccEEEcccCCCC
Q psy4744 224 RFYGSLERPF--VGF--NQASLVEFFTNFYQKARVNPGQVDFLEADGSAIK 270 (270)
Q Consensus 224 ~~~~~~~~~~--~~~--~~~~~~~a~~~al~~agi~~~did~v~~hgtgt~ 270 (270)
.+++..++++ +.| +.++..++|+.||++||++|+|||||++|||||+
T Consensus 257 ~G~g~~~Da~h~t~P~p~g~Ga~~am~~AL~~Agl~~~~idYinaHgTsT~ 307 (412)
T COG0304 257 VGYGTTSDAYHITAPAPDGEGAIRAMRAALADAGLTPEDIDYINAHGTSTP 307 (412)
T ss_pred EEEEecccccccCCCCCCCchHHHHHHHHHHHcCCCHhHCCEEeCCCccCC
Confidence 9999987776 444 4788999999999999999999999999999996
No 9
>PRK09116 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=100.00 E-value=7.9e-48 Score=341.85 Aligned_cols=266 Identities=17% Similarity=0.182 Sum_probs=229.1
Q ss_pred hhhhhhhcCCCcccccCCCC----CCCCCCCCCCCCCcccCCCCHHHHhhcChHHHHHHHHHHHHHHHCCCCC-CCCCCC
Q psy4744 2 EFNTGVARRNCPIKIKSSHN----TPASKLQTITKFDQTFFSLHSRLANVLDPLVRCFIEPCFEAILDAGINP-KSLAGS 76 (270)
Q Consensus 2 ~~w~~l~~g~~~~~~~~~~~----~~~~~~~~~~~fd~~~~~~~~~~~~~~~~~~~l~l~a~~~Al~dAg~~~-~~~~~~ 76 (270)
|||++|.+|+++|+.++.+. ++......+++||.+.+ ++++..++|++.++|++.++.+||+|||+.. ..+++.
T Consensus 21 ~~~~~L~~g~s~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~~~r~~~~~~~~al~aa~~Al~dAGl~~~~~~~~~ 99 (405)
T PRK09116 21 TIAARLKAGRNAVRRMPEWDRYDGLNTRLAAPIDDFELPAH-YTRKKIRSMGRVSLMATRASELALEDAGLLGDPILTDG 99 (405)
T ss_pred HHHHHHHcCCCCEEeCCchhhccCCCCceEEEecCcChhHh-cCHHHHhhCCHHHHHHHHHHHHHHHHcCCCCccccCCC
Confidence 79999999999999887543 22344556677888765 7899999999999999999999999999953 335678
Q ss_pred CeEEEEccCCCCccc--------cccCccccchhhHhhhhhhhHHHHHHHHcCCCCCCccccccchhHHHHHHHHHHHHh
Q psy4744 77 NSSVYTNSCISDDES--------LGCDERLTTNFWLLAHVRCLLANRIAYLFDLKGPSFTIDNSWTGGIEVLRQAVQDIS 148 (270)
Q Consensus 77 ~~gv~~g~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl~Gp~~~v~~~cas~~~al~~A~~~i~ 148 (270)
++||++|++.+.... .+.....+++..++..++|.++.+|++.|+++||+++++++|+|++.||..|+++|+
T Consensus 100 r~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~~~~Gp~~ti~~acas~~~Al~~A~~~I~ 179 (405)
T PRK09116 100 RMGIAYGSSTGSTDPIGAFGTMLLEGSMSGITATTYVRMMPHTTAVNVGLFFGLKGRVIPTSSACTSGSQGIGYAYEAIK 179 (405)
T ss_pred cEEEEEeecccchHHHHHHHHHHhhcCccccChhhhhhhcccHHHHHHHHHhCCCCCcccccchhhhHHHHHHHHHHHHH
Confidence 999999998776432 122334567778888889999999999999999999999999999999999999999
Q ss_pred cCCCCEEEEeeeccccCchhHHhhhcCcccC-----CCCCCcccCCCCCceeecCeeEEEEecChHHHHhhcCceEeEEE
Q psy4744 149 EGRVDTAIVGVSNLLLNANLNSLFQGLNRLS-----PDGKTRSFDHLANGYARSEGIVVLLLQRSETALRSYGEVLHAES 223 (270)
Q Consensus 149 ~G~~d~~lv~g~~~~~~~~~~~~~~~~~~ls-----~~~~~~pfd~~~~g~~~geGA~alvL~~~~~A~~~~g~~~~~~~ 223 (270)
+|++|++||+|+|. .++.....|..++.++ +...|||||++++|+++|||++++|||++++|+++ |..+++.+
T Consensus 180 ~G~~d~~lvgg~d~-~~~~~~~~f~~l~~~~~~~~~~~~~~rPfd~~~~G~v~gEGa~~~vLe~~~~A~~r-ga~i~a~i 257 (405)
T PRK09116 180 YGYQTVMLAGGAEE-LCPTEAAVFDTLFATSTRNDAPELTPRPFDANRDGLVIGEGAGTLVLEELEHAKAR-GATIYAEI 257 (405)
T ss_pred cCCCCEEEEecchh-cChHHHHHHHHhhhhccCCCCCCCCCCCCcCCCCCEeeeccEEEEEEccHHHHHhC-CCceEEEE
Confidence 99999999999998 6777777777776654 45689999999999999999999999999999988 89999999
Q ss_pred eccCCCCCCC--cCCCHHHHHHHHHHHHHHcCCCCCCccEEEcccCCCC
Q psy4744 224 RFYGSLERPF--VGFNQASLVEFFTNFYQKARVNPGQVDFLEADGSAIK 270 (270)
Q Consensus 224 ~~~~~~~~~~--~~~~~~~~~~a~~~al~~agi~~~did~v~~hgtgt~ 270 (270)
.+++..+++. +.|+..++.++|+++|+++|++|+|||||++|||||+
T Consensus 258 ~g~~~~~d~~~~~~p~~~~~~~ai~~AL~~Agi~p~dId~I~~Hgtgt~ 306 (405)
T PRK09116 258 VGFGTNSDGAHVTQPQAETMQIAMELALKDAGLAPEDIGYVNAHGTATD 306 (405)
T ss_pred EEEEEcCCCCcCCCCCHHHHHHHHHHHHHHhCCCHHHcCEEECcCccCC
Confidence 9998766543 6688899999999999999999999999999999996
No 10
>PRK08439 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=100.00 E-value=1.4e-47 Score=341.25 Aligned_cols=265 Identities=21% Similarity=0.283 Sum_probs=236.0
Q ss_pred hhhhhhhcCCCcccccCCCCCC---CCCCCCCCCCCcccCCCCHHHHhhcChHHHHHHHHHHHHHHHCCCCCCCCCCCCe
Q psy4744 2 EFNTGVARRNCPIKIKSSHNTP---ASKLQTITKFDQTFFSLHSRLANVLDPLVRCFIEPCFEAILDAGINPKSLAGSNS 78 (270)
Q Consensus 2 ~~w~~l~~g~~~~~~~~~~~~~---~~~~~~~~~fd~~~~~~~~~~~~~~~~~~~l~l~a~~~Al~dAg~~~~~~~~~~~ 78 (270)
|||++|++|++.|+.++.+... ....++++.||++.+ +++++.+++++..+|++.++++||+|||+++++++..++
T Consensus 21 ~~~~~L~~G~s~i~~~~~~~~~~~~~~~~g~i~~f~~~~~-~~~~~~~~~~~~~~l~~~Aa~~AL~dAGl~~~~~~~~r~ 99 (406)
T PRK08439 21 SSFKAICNGECGIKKITLFDASDFPVQIAGEITDFDPTEV-MDPKEVKKADRFIQLGLKAAREAMKDAGFLPEELDAERF 99 (406)
T ss_pred HHHHHHHcCCCceEeCCCccccCCCCceeEEcCCcChhhc-CCHHHHhhcCHHHHHHHHHHHHHHHHcCCCcccCCCCCE
Confidence 7999999999999877654332 244456778999887 899999999999999999999999999999888988999
Q ss_pred EEEEccCCCCccc--------cccCccccchhhHhhhhhhhHHHHHHHHcCCCCCCccccccchhHHHHHHHHHHHHhcC
Q psy4744 79 SVYTNSCISDDES--------LGCDERLTTNFWLLAHVRCLLANRIAYLFDLKGPSFTIDNSWTGGIEVLRQAVQDISEG 150 (270)
Q Consensus 79 gv~~g~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl~Gp~~~v~~~cas~~~al~~A~~~i~~G 150 (270)
|+++|+..++... .+.....++|+.++..+.+.++.+++..||++||+++++++|+|++.||..|+++|++|
T Consensus 100 Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl~Gp~~~~~~acas~~~Al~~A~~~i~~G 179 (406)
T PRK08439 100 GVSSASGIGGLPNIEKNSIICFEKGPRKISPFFIPSALVNMLGGFISIEHGLKGPNLSSVTACAAGTHAIIEAVKTIMLG 179 (406)
T ss_pred EEEEecCCccHHHHHHHHHHHHhcCccccCchhcccccccHHHHHHHHHhCCCCCccccccHhHHHHHHHHHHHHHHHcC
Confidence 9999988776432 22344567788888999999999999999999999999999999999999999999999
Q ss_pred CCCEEEEeeeccccCchhHHhhhcCcccC-----CCCCCcccCCCCCceeecCeeEEEEecChHHHHhhcCceEeEEEec
Q psy4744 151 RVDTAIVGVSNLLLNANLNSLFQGLNRLS-----PDGKTRSFDHLANGYARSEGIVVLLLQRSETALRSYGEVLHAESRF 225 (270)
Q Consensus 151 ~~d~~lv~g~~~~~~~~~~~~~~~~~~ls-----~~~~~~pfd~~~~g~~~geGA~alvL~~~~~A~~~~g~~~~~~~~~ 225 (270)
++|++||+|+|..+++..+..|..++.++ ++..|||||.+++|+++|||++++|||++++|+++ |..+++.+.+
T Consensus 180 ~~d~~lv~g~d~~l~~~~~~~f~~~~~ls~~~~~p~~~~rpfd~~~~G~v~gEGa~~lvLe~~~~A~~r-g~~i~a~i~g 258 (406)
T PRK08439 180 GADKMLVVGAESAICPVGIGGFAAMKALSTRNDDPKKASRPFDKDRDGFVMGEGAGALVLEEYESAKKR-GAKIYAEIIG 258 (406)
T ss_pred CCCEEEEecchhccCHHHHHHHHHhCccccCCCCCccCcCCccCCCCcEEeeCceEEEEEccHHHHHHC-CCeEEEEEEe
Confidence 99999999999989999999999999887 45689999999999999999999999999999998 9999999999
Q ss_pred cCCCCCC--CcCCCHHHHHHHHHHHHHHcCCCCCCccEEEcccCCCC
Q psy4744 226 YGSLERP--FVGFNQASLVEFFTNFYQKARVNPGQVDFLEADGSAIK 270 (270)
Q Consensus 226 ~~~~~~~--~~~~~~~~~~~a~~~al~~agi~~~did~v~~hgtgt~ 270 (270)
++...++ ...|+..++.++|+++|+++|+ +||||||+|||||+
T Consensus 259 ~~~~~d~~~~~~p~~~~~~~a~~~al~~ag~--~~i~~v~~hgtgt~ 303 (406)
T PRK08439 259 FGESGDANHITSPAPEGPLRAMKAALEMAGN--PKIDYINAHGTSTP 303 (406)
T ss_pred EEccCCCCCCCCCCHHHHHHHHHHHHHHcCC--CccCEEEccCCcCC
Confidence 8876544 3678889999999999999998 89999999999996
No 11
>PRK07967 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed
Probab=100.00 E-value=1.1e-47 Score=340.25 Aligned_cols=262 Identities=18% Similarity=0.286 Sum_probs=226.0
Q ss_pred hhhhhhhcCCCcccccCCCCC---CCCCCCCCCCCCcccCCCCHHHHhhcChHHHHHHHHHHHHHHHCCCCCCCCCCCCe
Q psy4744 2 EFNTGVARRNCPIKIKSSHNT---PASKLQTITKFDQTFFSLHSRLANVLDPLVRCFIEPCFEAILDAGINPKSLAGSNS 78 (270)
Q Consensus 2 ~~w~~l~~g~~~~~~~~~~~~---~~~~~~~~~~fd~~~~~~~~~~~~~~~~~~~l~l~a~~~Al~dAg~~~~~~~~~~~ 78 (270)
+||++|.+|+++|+..+.+.. +....+++ +||++.+ ++++..+++++..++++.++++||+|||+..+.++..++
T Consensus 21 ~~w~~l~~G~sgi~~~~~~~~~~~~~~~~g~~-~~~~~~~-~~~~~~~~~~r~~~~a~~aa~~Al~dAGl~~~~~~~~rv 98 (406)
T PRK07967 21 EVLASLREGRSGITFSPEFAEMGMRSQVWGNV-KLDPTGL-IDRKVMRFMGDASAYAYLAMEQAIADAGLSEEQVSNPRT 98 (406)
T ss_pred HHHHHHHcCCCceeECCcccccCCCCceEEEc-CCChhhc-CCHHHhhcCCHHHHHHHHHHHHHHHHcCCCCccCCCCCE
Confidence 799999999999988765433 22333344 4888776 788889999999999999999999999998878888899
Q ss_pred EEEEccCCCCcccc--------c-cCccccchhhHhhhhhhhHHHHHHHHcCCCCCCccccccchhHHHHHHHHHHHHhc
Q psy4744 79 SVYTNSCISDDESL--------G-CDERLTTNFWLLAHVRCLLANRIAYLFDLKGPSFTIDNSWTGGIEVLRQAVQDISE 149 (270)
Q Consensus 79 gv~~g~~~~~~~~~--------~-~~~~~~~~~~~~~~~~~~~a~~ia~~~gl~Gp~~~v~~~cas~~~al~~A~~~i~~ 149 (270)
||++|++.+.+... . ...+.+.|+.++..+.+.++.+|++.||++||+++|+++|+|++.||..|+++|++
T Consensus 99 Gv~~gs~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~is~~~~l~Gp~~tvs~aCas~~~Ai~~A~~~ir~ 178 (406)
T PRK07967 99 GLIAGSGGGSTRNQVEAADAMRGPRGPKRVGPYAVTKAMASTVSACLATPFKIKGVNYSISSACATSAHCIGNAVEQIQL 178 (406)
T ss_pred EEEEecCCccHHHHHHHHHHHHhccCcccCCchhhcccccchHHHHHHHHHCCCCCccccccHhHHHHHHHHHHHHHHHc
Confidence 99999987764321 1 23456788889999999999999999999999999999999999999999999999
Q ss_pred CCCCEEEEeeeccccCchhHHhhhcCcccC------CCCCCcccCCCCCceeecCeeEEEEecChHHHHhhcCceEeEEE
Q psy4744 150 GRVDTAIVGVSNLLLNANLNSLFQGLNRLS------PDGKTRSFDHLANGYARSEGIVVLLLQRSETALRSYGEVLHAES 223 (270)
Q Consensus 150 G~~d~~lv~g~~~~~~~~~~~~~~~~~~ls------~~~~~~pfd~~~~g~~~geGA~alvL~~~~~A~~~~g~~~~~~~ 223 (270)
|++|++||+|+|. ..+.....|..++.++ |+..|||||.+++|+++|||++++|||++++|+++ |..+++.+
T Consensus 179 G~~d~~lvgg~d~-~~~~~~~~f~~~~~ls~~~~~~p~~~~rPFd~~r~G~v~gEGaa~lvLe~~~~A~~r-ga~i~a~i 256 (406)
T PRK07967 179 GKQDIVFAGGGEE-LDWEMSCLFDAMGALSTKYNDTPEKASRAYDANRDGFVIAGGGGVVVVEELEHALAR-GAKIYAEI 256 (406)
T ss_pred CCCCEEEEeeecc-cChHHHHHHHHhhhhccCCCCCCCcCCcCCcCCCCceeeeceEEEEEEeeHHHHHhC-CCcEEEEE
Confidence 9999999999997 5555566688888876 45689999999999999999999999999999998 99999999
Q ss_pred eccCCCCCC--CcCCCHHHHHHHHHHHHHHcCCCCCCccEEEcccCCCC
Q psy4744 224 RFYGSLERP--FVGFNQASLVEFFTNFYQKARVNPGQVDFLEADGSAIK 270 (270)
Q Consensus 224 ~~~~~~~~~--~~~~~~~~~~~a~~~al~~agi~~~did~v~~hgtgt~ 270 (270)
.+++..+++ .+.|+..++.++|++||+.++ + ||||||+|||||+
T Consensus 257 ~G~g~~~d~~~~~~p~~~~~~~a~~~Al~~~~--~-~Idyi~aHgtGT~ 302 (406)
T PRK07967 257 VGYGATSDGYDMVAPSGEGAVRCMQMALATVD--T-PIDYINTHGTSTP 302 (406)
T ss_pred EEEEECCCCCCCCCCCHHHHHHHHHHHHhCCC--C-CccEEEcCCCCCC
Confidence 999876655 367889999999999998654 5 9999999999996
No 12
>PRK07314 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=100.00 E-value=2.1e-47 Score=341.65 Aligned_cols=267 Identities=19% Similarity=0.277 Sum_probs=232.5
Q ss_pred hhhhhhhcCCCcccccCCCCCC---CCCCCCCCCCCcccCCCCHHHHhhcChHHHHHHHHHHHHHHHCCCCCCCCCCCCe
Q psy4744 2 EFNTGVARRNCPIKIKSSHNTP---ASKLQTITKFDQTFFSLHSRLANVLDPLVRCFIEPCFEAILDAGINPKSLAGSNS 78 (270)
Q Consensus 2 ~~w~~l~~g~~~~~~~~~~~~~---~~~~~~~~~fd~~~~~~~~~~~~~~~~~~~l~l~a~~~Al~dAg~~~~~~~~~~~ 78 (270)
+||++|++|++.++..+.+... ..+.+.+++||++.| +++++.+.|+|+++|+++++.+||+|||+++++++..++
T Consensus 21 ~~w~~l~~g~~~~~~~~~~~~~~~~~~~~g~i~~f~~~~~-~~~~~~~~~~~~~~l~~~aa~~Al~dAGl~~~~~~~~~~ 99 (411)
T PRK07314 21 STWKNLLAGKSGIGPITHFDTSDLAVKIAGEVKDFNPDDY-MSRKEARRMDRFIQYGIAAAKQAVEDAGLEITEENADRI 99 (411)
T ss_pred HHHHHHHhCCCcEEECCcccccCCCccEEEEeCCcChhhc-CCHHHhhcCCHHHHHHHHHHHHHHHHcCCCcccCCcccE
Confidence 7999999999999877654322 244556778999988 999999999999999999999999999999999999999
Q ss_pred EEEEccCCCCcccc--------ccCccccchhhHhhhhhhhHHHHHHHHcCCCCCCccccccchhHHHHHHHHHHHHhcC
Q psy4744 79 SVYTNSCISDDESL--------GCDERLTTNFWLLAHVRCLLANRIAYLFDLKGPSFTIDNSWTGGIEVLRQAVQDISEG 150 (270)
Q Consensus 79 gv~~g~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl~Gp~~~v~~~cas~~~al~~A~~~i~~G 150 (270)
||++|++.+..... +...+.+.|+.++..+.+..+++++..||++||+++++++|+|++.||..|+++|++|
T Consensus 100 gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl~Gp~~tv~~acaSgl~Al~~A~~~I~~G 179 (411)
T PRK07314 100 GVIIGSGIGGLETIEEQHITLLEKGPRRVSPFFVPMAIINMAAGHVSIRYGAKGPNHSIVTACATGAHAIGDAARLIAYG 179 (411)
T ss_pred EEEEecCcCChHHHHHHHHHHHhcCccccChhhhhhhcchHHHHHHHHHhCCCCccccchhhhHHHHHHHHHHHHHHhcC
Confidence 99999987764321 2233456677788888899999999999999999999999999999999999999999
Q ss_pred CCCEEEEeeeccccCchhHHhhhcCcccCC-----CCCCcccCCCCCceeecCeeEEEEecChHHHHhhcCceEeEEEec
Q psy4744 151 RVDTAIVGVSNLLLNANLNSLFQGLNRLSP-----DGKTRSFDHLANGYARSEGIVVLLLQRSETALRSYGEVLHAESRF 225 (270)
Q Consensus 151 ~~d~~lv~g~~~~~~~~~~~~~~~~~~ls~-----~~~~~pfd~~~~g~~~geGA~alvL~~~~~A~~~~g~~~~~~~~~ 225 (270)
++|++||+|+|...++.....|..++.++. +..|+|||.+++|+++||||+++||++++.|+++ +..+++.+.+
T Consensus 180 ~~d~vlvgg~~~~~~~~~~~~~~~~~~ls~~~~~p~~~~~pfd~~~dG~~~geGAaavvL~~~~~A~~~-g~~~~a~I~g 258 (411)
T PRK07314 180 DADVMVAGGAEAAITPLGIAGFAAARALSTRNDDPERASRPFDKDRDGFVMGEGAGILVLEELEHAKAR-GAKIYAEVVG 258 (411)
T ss_pred CCCEEEEeeecccCCHHHHHHHHHhccccCCCCCCCcCcCCCcCCCCCEeEEceEEEEEEeeHHHHHHC-CCeEEEEEEE
Confidence 999999999999889888888888887763 5689999999999999999999999999999988 8889999998
Q ss_pred cCCCCCCC--cCC--CHHHHHHHHHHHHHHcCCCCCCccEEEcccCCCC
Q psy4744 226 YGSLERPF--VGF--NQASLVEFFTNFYQKARVNPGQVDFLEADGSAIK 270 (270)
Q Consensus 226 ~~~~~~~~--~~~--~~~~~~~a~~~al~~agi~~~did~v~~hgtgt~ 270 (270)
++...++. ..| ...++.++++++|+++|++|+||||||+|||||+
T Consensus 259 ~~~~~d~~~~~~~~~~~~~~~~a~~~Al~~agi~~~dId~v~~hgtgt~ 307 (411)
T PRK07314 259 YGMTGDAYHMTAPAPDGEGAARAMKLALKDAGINPEDIDYINAHGTSTP 307 (411)
T ss_pred EEEcCCCCCCCCCCCCcHHHHHHHHHHHHHcCCCHHHCCEEEccccCCc
Confidence 88665433 233 4566899999999999999999999999999995
No 13
>PRK07910 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=100.00 E-value=3.5e-47 Score=338.74 Aligned_cols=263 Identities=19% Similarity=0.148 Sum_probs=225.2
Q ss_pred hhhhhhhcCCCcccccCCCC-----CCCCCCCCC-CCCCcccCCCCHHHHhhcChHHHHHHHHHHHHHHHCCCCCCCCCC
Q psy4744 2 EFNTGVARRNCPIKIKSSHN-----TPASKLQTI-TKFDQTFFSLHSRLANVLDPLVRCFIEPCFEAILDAGINPKSLAG 75 (270)
Q Consensus 2 ~~w~~l~~g~~~~~~~~~~~-----~~~~~~~~~-~~fd~~~~~~~~~~~~~~~~~~~l~l~a~~~Al~dAg~~~~~~~~ 75 (270)
+||++|.+|++.++.++.+. .+..+.+.+ ++||+ + ++++++++|+|++++++.++++||+|||+. .+++
T Consensus 31 ~~w~~L~~G~s~i~~~~~~~~~~~~~~~~~~g~i~~~~d~--~-~~~~~~~~~d~~~~~~l~aa~~AledAg~~--~~~~ 105 (418)
T PRK07910 31 TTWKLLLDGQSGIRTLDDPFVEEFDLPVRIGGHLLEEFDH--Q-LTRVELRRMSYLQRMSTVLGRRVWENAGSP--EVDT 105 (418)
T ss_pred HHHHHHHcCCCeeEeCChhhhhccCCCcceEEEeccCccc--c-CCHHHHhhccHHHHHHHHHHHHHHHHcCCC--CCCc
Confidence 79999999999998765432 222222222 34554 2 789999999999999999999999999984 3667
Q ss_pred CCeEEEEccCCCCcccc--------ccCccccchhhHhhhhhhhHHHHHHHHcCCCCCCccccccchhHHHHHHHHHHHH
Q psy4744 76 SNSSVYTNSCISDDESL--------GCDERLTTNFWLLAHVRCLLANRIAYLFDLKGPSFTIDNSWTGGIEVLRQAVQDI 147 (270)
Q Consensus 76 ~~~gv~~g~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl~Gp~~~v~~~cas~~~al~~A~~~i 147 (270)
.++||++|++.+..... +...+.+.++.++..+.|.++.+++..++++||+++++++|+|++.||..|+++|
T Consensus 106 ~r~Gv~~G~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~~~~G~~~ti~taCaS~~~Al~~A~~~I 185 (418)
T PRK07910 106 NRLMVSIGTGLGSAEELVFAYDDMRARGLRAVSPLAVQMYMPNGPAAAVGLERHAKAGVITPVSACASGSEAIAQAWRQI 185 (418)
T ss_pred ccEEEEEEEccCccHhHHHHHHHHHhcCcccCChhHHHHhccccHHHHHHHHhCCCCCcccccchhHHHHHHHHHHHHHH
Confidence 89999999988764321 2234456788888899999999999999999999999999999999999999999
Q ss_pred hcCCCCEEEEeeeccccCchhHHhhhcCcc-cC-----CCCCCcccCCCCCceeecCeeEEEEecChHHHHhhcCceEeE
Q psy4744 148 SEGRVDTAIVGVSNLLLNANLNSLFQGLNR-LS-----PDGKTRSFDHLANGYARSEGIVVLLLQRSETALRSYGEVLHA 221 (270)
Q Consensus 148 ~~G~~d~~lv~g~~~~~~~~~~~~~~~~~~-ls-----~~~~~~pfd~~~~g~~~geGA~alvL~~~~~A~~~~g~~~~~ 221 (270)
++|++|++||+|+|..+++..+..|..+++ ++ +++.|||||.+++|+++|||++++|||++++|+++ |..+++
T Consensus 186 ~~G~~d~aivgg~~~~~~~~~~~~f~~~~~~ls~~~~~~~~~~rPFd~~~~G~v~gEGaa~vvLe~~~~A~~r-g~~i~a 264 (418)
T PRK07910 186 VLGEADIAICGGVETRIEAVPIAGFAQMRIVMSTNNDDPAGACRPFDKDRDGFVFGEGGALMVIETEEHAKAR-GANILA 264 (418)
T ss_pred HcCCCCEEEEccccccCCHHHHHHHHhcCCccccCCCCCCCCcCCCcCCCCCEeeeceEEEEEEeeHHHHHhC-CCcEEE
Confidence 999999999999999899999999999998 76 67799999999999999999999999999999988 888999
Q ss_pred EEeccCCCCCCC----cCCCHHHHHHHHHHHHHHcCCCCCCccEEEcccCCCC
Q psy4744 222 ESRFYGSLERPF----VGFNQASLVEFFTNFYQKARVNPGQVDFLEADGSAIK 270 (270)
Q Consensus 222 ~~~~~~~~~~~~----~~~~~~~~~~a~~~al~~agi~~~did~v~~hgtgt~ 270 (270)
.+.+++..+++. +.|+..++.++|+++|+++|++|+||||||+|||||+
T Consensus 265 ~i~g~~~~~dg~~~~~~~~~~~~~~~a~~~Al~~agi~~~did~ie~hgtgt~ 317 (418)
T PRK07910 265 RIMGASITSDGFHMVAPDPNGERAGHAMTRAIELAGLTPGDIDHVNAHATGTS 317 (418)
T ss_pred EEEEEEEecCCCCCCCCCCCHHHHHHHHHHHHHHhCCCHHHCCEEEcCCcCCC
Confidence 988887765543 3456677899999999999999999999999999996
No 14
>PTZ00050 3-oxoacyl-acyl carrier protein synthase; Provisional
Probab=100.00 E-value=9.9e-47 Score=337.24 Aligned_cols=264 Identities=20% Similarity=0.246 Sum_probs=225.2
Q ss_pred hhhhhhhcCCCcccccCCCC-------------------CCCCCCCCCC--CCCcccCCCCHHHHhhcChHHHHHHHHHH
Q psy4744 2 EFNTGVARRNCPIKIKSSHN-------------------TPASKLQTIT--KFDQTFFSLHSRLANVLDPLVRCFIEPCF 60 (270)
Q Consensus 2 ~~w~~l~~g~~~~~~~~~~~-------------------~~~~~~~~~~--~fd~~~~~~~~~~~~~~~~~~~l~l~a~~ 60 (270)
+||++|.+|++.++.++.+. .+..+...++ .||++.|...+ +.++.++|++.+++
T Consensus 11 ~~w~~L~~G~s~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~f~~~~~~~~~----~~~~~~~l~~~aa~ 86 (421)
T PTZ00050 11 STWEALIAGKSGIRKLTEFPKFLPDCIPEQKALENLVAAMPCQIAAEVDQSEFDPSDFAPTK----RESRATHFAMAAAR 86 (421)
T ss_pred HHHHHHHcCCCeeecCCchhhcccccccccccccccccCCCCceEEECCcccCChhHcCCcc----cCCHHHHHHHHHHH
Confidence 79999999999998776543 1112222333 58887764433 34899999999999
Q ss_pred HHHHHCCCC-CCCCCCCCeEEEEccCCCCccc--------cccCccccchhhHhhhhhhhHHHHHHHHcCCCCCCccccc
Q psy4744 61 EAILDAGIN-PKSLAGSNSSVYTNSCISDDES--------LGCDERLTTNFWLLAHVRCLLANRIAYLFDLKGPSFTIDN 131 (270)
Q Consensus 61 ~Al~dAg~~-~~~~~~~~~gv~~g~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl~Gp~~~v~~ 131 (270)
+||+|||++ +.+++..++|+++|++.+.+.. .+.....++++.++..+.|.++++|++.||++||+++|++
T Consensus 87 ~Al~dAGl~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~~l~Gp~~ti~~ 166 (421)
T PTZ00050 87 EALADAKLDILSEKDQERIGVNIGSGIGSLADLTDEMKTLYEKGHSRVSPYFIPKILGNMAAGLVAIKHKLKGPSGSAVT 166 (421)
T ss_pred HHHHHcCCCcccccCcccEEEEEccCcccHHHHHHHHHHHHhcCcCcCCHHHHHhhhhhHHHHHHHHHhCCCCccccccc
Confidence 999999998 7788889999999998876432 1224456778899999999999999999999999999999
Q ss_pred cchhHHHHHHHHHHHHhcCCCCEEEEeeeccccCchhHHhhhcCcccC------CCCCCcccCCCCCceeecCeeEEEEe
Q psy4744 132 SWTGGIEVLRQAVQDISEGRVDTAIVGVSNLLLNANLNSLFQGLNRLS------PDGKTRSFDHLANGYARSEGIVVLLL 205 (270)
Q Consensus 132 ~cas~~~al~~A~~~i~~G~~d~~lv~g~~~~~~~~~~~~~~~~~~ls------~~~~~~pfd~~~~g~~~geGA~alvL 205 (270)
+|+||+.||..|+++|++|++|++||+|+|...+|..+..|..++.++ ++..|||||++++|+++||||+++||
T Consensus 167 aCaSg~~Al~~A~~~I~~G~~d~~lvgG~e~~~~p~~~~~f~~~~~l~~~~~~~p~~~~~pfd~~~~G~~~gEGAaalvL 246 (421)
T PTZ00050 167 ACATGAHCIGEAFRWIKYGEADIMICGGTEASITPVSFAGFSRMRALCTKYNDDPQRASRPFDKDRAGFVMGEGAGILVL 246 (421)
T ss_pred HhHHHHHHHHHHHHHHHcCCCCEEEECcccccCCHHHHHHHHhhhccccCcCCCCCccCCCCcCCCCCEeeccceEEEEE
Confidence 999999999999999999999999999999988888888888888775 45689999999999999999999999
Q ss_pred cChHHHHhhcCceEeEEEeccCCCCCCC----cCCCHHHHHHHHHHHHHH-cCCCCCCccEEEcccCCCC
Q psy4744 206 QRSETALRSYGEVLHAESRFYGSLERPF----VGFNQASLVEFFTNFYQK-ARVNPGQVDFLEADGSAIK 270 (270)
Q Consensus 206 ~~~~~A~~~~g~~~~~~~~~~~~~~~~~----~~~~~~~~~~a~~~al~~-agi~~~did~v~~hgtgt~ 270 (270)
|++++|+++ |..+++.+.+++...++. ..|+..++.++|++||++ ||++|+||||||+|||||+
T Consensus 247 e~~~~A~~~-g~~i~a~i~g~~~~~d~~~~~~p~~~~~~~~~ai~~Al~~~Agi~~~dId~ie~hgtgt~ 315 (421)
T PTZ00050 247 EELEHALRR-GAKIYAEIRGYGSSSDAHHITAPHPDGRGARRCMENALKDGANININDVDYVNAHATSTP 315 (421)
T ss_pred eeHHHHHHC-CCeEEEEEEEEEEcCCCCCCCCCCCChHHHHHHHHHHHHhccCCChhhCCEEECCCccCC
Confidence 999999988 889999999888765543 334667899999999999 9999999999999999995
No 15
>TIGR03150 fabF beta-ketoacyl-acyl-carrier-protein synthase II. FabB sequences should fall well below the noise cutoff of this model.
Probab=100.00 E-value=2.4e-46 Score=334.74 Aligned_cols=267 Identities=21% Similarity=0.312 Sum_probs=232.5
Q ss_pred hhhhhhhcCCCcccccCCCCCC---CCCCCCCCCCCcccCCCCHHHHhhcChHHHHHHHHHHHHHHHCCCCCCCCCCCCe
Q psy4744 2 EFNTGVARRNCPIKIKSSHNTP---ASKLQTITKFDQTFFSLHSRLANVLDPLVRCFIEPCFEAILDAGINPKSLAGSNS 78 (270)
Q Consensus 2 ~~w~~l~~g~~~~~~~~~~~~~---~~~~~~~~~fd~~~~~~~~~~~~~~~~~~~l~l~a~~~Al~dAg~~~~~~~~~~~ 78 (270)
+||++|++|++.++..+.++.. ..+.+.+++||+++| +++++.++|+++++|+++++++||+|||+++++++..++
T Consensus 20 ~~~~~l~~g~s~~~~~~~~~~~~~~~~~~g~i~~f~~~~~-~~~~~~~~~~~~~~l~~~aa~~Al~dAgl~~~~~~~~~~ 98 (407)
T TIGR03150 20 EFWENLLAGKSGIGPITRFDASDLPVKIAGEVKDFDPEDY-IDKKEARRMDRFIQYALAAAKEAVEDSGLDIEEEDAERV 98 (407)
T ss_pred HHHHHHHcCCCeeEECCcccccCCCCcEEEEeCCcChhhc-CCHHHHhhcCHHHHHHHHHHHHHHHhcCCCcccCCccce
Confidence 7999999999999877654332 234456778999998 999999999999999999999999999999999999999
Q ss_pred EEEEccCCCCcccc--------ccCccccchhhHhhhhhhhHHHHHHHHcCCCCCCccccccchhHHHHHHHHHHHHhcC
Q psy4744 79 SVYTNSCISDDESL--------GCDERLTTNFWLLAHVRCLLANRIAYLFDLKGPSFTIDNSWTGGIEVLRQAVQDISEG 150 (270)
Q Consensus 79 gv~~g~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl~Gp~~~v~~~cas~~~al~~A~~~i~~G 150 (270)
|+++|+..+.+... +.....++|+.++..+.+.++++++..||++||+++++++|+|++.||..|+++|++|
T Consensus 99 gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl~g~~~~v~~acaSg~~Al~~A~~~I~~G 178 (407)
T TIGR03150 99 GVIIGSGIGGLETIEEQHIVLLEKGPRRVSPFFIPMSIINMAAGQISIRYGAKGPNHAVVTACATGTHAIGDAFRLIQRG 178 (407)
T ss_pred EEEEecCCCchHHHHHHHHHHHhcCccccChhhhhcccccHHHHHHHHHhCCCCcccccccHHHHHHHHHHHHHHHHhcC
Confidence 99999987764332 2233456777788888899999999999999999999999999999999999999999
Q ss_pred CCCEEEEeeeccccCchhHHhhhcCcccCC-----CCCCcccCCCCCceeecCeeEEEEecChHHHHhhcCceEeEEEec
Q psy4744 151 RVDTAIVGVSNLLLNANLNSLFQGLNRLSP-----DGKTRSFDHLANGYARSEGIVVLLLQRSETALRSYGEVLHAESRF 225 (270)
Q Consensus 151 ~~d~~lv~g~~~~~~~~~~~~~~~~~~ls~-----~~~~~pfd~~~~g~~~geGA~alvL~~~~~A~~~~g~~~~~~~~~ 225 (270)
++|++||+|+|.+.++.....|...+.++. ...++|||.+++|+++||||+++||+++++|+++ +..+++.+.+
T Consensus 179 ~~d~~lvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~~g~~~gEGAaalvL~~~~~A~~~-g~~i~a~i~g 257 (407)
T TIGR03150 179 DADVMIAGGAEAAITPLGIAGFAAMKALSTRNDDPEKASRPFDKDRDGFVMGEGAGVLVLEELEHAKAR-GAKIYAEIVG 257 (407)
T ss_pred CCCEEEEecccCcCCHHHHHHHHHhCcccCCCCCCCcCCCCCcCCCCcEEEeceEEEEEEeeHHHHHHC-CCeEEEEEEE
Confidence 999999999999889888888888887764 4569999999999999999999999999999987 8889999998
Q ss_pred cCCCCCCC--cC--CCHHHHHHHHHHHHHHcCCCCCCccEEEcccCCCC
Q psy4744 226 YGSLERPF--VG--FNQASLVEFFTNFYQKARVNPGQVDFLEADGSAIK 270 (270)
Q Consensus 226 ~~~~~~~~--~~--~~~~~~~~a~~~al~~agi~~~did~v~~hgtgt~ 270 (270)
++...++. .. +...++.++++++|+++|++|+||||||+|||||+
T Consensus 258 ~~~~~d~~~~~~~~~~~~~~~~ai~~Al~~Agi~~~dId~ve~h~tgt~ 306 (407)
T TIGR03150 258 YGMSGDAYHITAPAPEGEGAARAMRAALKDAGINPEDVDYINAHGTSTP 306 (407)
T ss_pred EEECCCCCCCCCCCCCcHHHHHHHHHHHHHcCCCHhHCCEEeCcCCCCC
Confidence 88765433 22 34567899999999999999999999999999994
No 16
>PRK06519 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=100.00 E-value=7.3e-46 Score=327.01 Aligned_cols=261 Identities=15% Similarity=0.074 Sum_probs=215.8
Q ss_pred hhhhhhhcCCCcccccCCCCCCCCCCCCCCCCCcccCCCCHH-HHhhcChHHHHHHHHHHHHHHHCCCCCCCCCCCCeEE
Q psy4744 2 EFNTGVARRNCPIKIKSSHNTPASKLQTITKFDQTFFSLHSR-LANVLDPLVRCFIEPCFEAILDAGINPKSLAGSNSSV 80 (270)
Q Consensus 2 ~~w~~l~~g~~~~~~~~~~~~~~~~~~~~~~fd~~~~~~~~~-~~~~~~~~~~l~l~a~~~Al~dAg~~~~~~~~~~~gv 80 (270)
+||++|.+|+++ ..++...+..-......++|++.+ ++++ ..+++++.++|++.++.+||+|||++....+..++||
T Consensus 25 ~~w~aL~~G~sg-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~r~~~r~~~~a~~Aa~~Al~dAGl~~~~~~~~r~Gv 102 (398)
T PRK06519 25 AHWNALSAGRPQ-PNVDTETFAPYPVHPLPEIDWSQQ-IPKRGDQRQMETWQRLGTYAAGLALDDAGIKGNEELLSTMDM 102 (398)
T ss_pred HHHHHHHcCCCC-CCCCcccccCcCcccccccChhhc-CCchhhhhccCHHHHHHHHHHHHHHHHcCCCCCCCCccceEE
Confidence 799999999997 333322221111112223444444 5666 7789999999999999999999999765556679999
Q ss_pred EEccCCCCcccc--------------------ccCccccchhhHhhhhhhhHHHHHHHHcCCCCCCccccccchhHHHHH
Q psy4744 81 YTNSCISDDESL--------------------GCDERLTTNFWLLAHVRCLLANRIAYLFDLKGPSFTIDNSWTGGIEVL 140 (270)
Q Consensus 81 ~~g~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl~Gp~~~v~~~cas~~~al 140 (270)
++|++.+..... +...+.++|++++..++|.++++|+..||++||+++|+++|+|++.||
T Consensus 103 ivGt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n~~a~~is~~~gl~Gp~~ti~~acaSg~~Ai 182 (398)
T PRK06519 103 IVAAGGGERDIAVDTAILNEARKRNDRGVLLNERLMTELRPTLFLAQLSNLLAGNISIVHKVTGSSRTFMGEESAGVSAI 182 (398)
T ss_pred EEEeCCCchhHHHhhhhhhcccchhHHHHHHHhcCCCccChhhhhhhhhhHHHHHHHHHhCCCCccccccCCccHHHHHH
Confidence 999998864321 113345789999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCCEEEEeeeccccCchhHHhhhcCcccCCCCCCcc-cCC---CCCceeecCeeEEEEecChHHHHhhcC
Q psy4744 141 RQAVQDISEGRVDTAIVGVSNLLLNANLNSLFQGLNRLSPDGKTRS-FDH---LANGYARSEGIVVLLLQRSETALRSYG 216 (270)
Q Consensus 141 ~~A~~~i~~G~~d~~lv~g~~~~~~~~~~~~~~~~~~ls~~~~~~p-fd~---~~~g~~~geGA~alvL~~~~~A~~~~g 216 (270)
..|+++|++|++|++||+|+|...++..+..|..++.++.. .++| ||. +++|+++|||++++|||++++|++| |
T Consensus 183 ~~A~~~I~~G~~d~~lvGG~d~~~~~~~~~~~~~~~~ls~~-~~~p~~d~~~~~r~G~v~GEGAa~lvLE~~~~A~~R-g 260 (398)
T PRK06519 183 EIAFARIASGQSDHALVGGAYNAERPDMLLLYELGGLLLKG-GWAPVWSRGGEDGGGFILGSGGAFLVLESREHAEAR-G 260 (398)
T ss_pred HHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHHcCccCCC-CCCchhccCccCCCCeeeeceEEEEEEeeHHHHHhC-C
Confidence 99999999999999999999998899888999999998864 5666 666 6999999999999999999999998 9
Q ss_pred ceEeEEEeccCCCCCCCcCCCHHHHHHHHHHHHHHcCCCCCCccEEEcccCCCC
Q psy4744 217 EVLHAESRFYGSLERPFVGFNQASLVEFFTNFYQKARVNPGQVDFLEADGSAIK 270 (270)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~agi~~~did~v~~hgtgt~ 270 (270)
..+++++.+++.. ... .+..++.++|++||++||+ ++|||||++|||||+
T Consensus 261 a~i~AeI~G~~~d--~~~-~~~~~~~~am~~AL~~Agl-~~~IdyI~ahgtgT~ 310 (398)
T PRK06519 261 ARPYARISGVESD--RAR-RAPGDLEASLERLLKPAGG-LAAPTAVISGATGAH 310 (398)
T ss_pred CceEEEEEEEeec--CCC-CChHHHHHHHHHHHHHCCC-cccCCEEEeCCCCCC
Confidence 9999999998643 222 2446789999999999999 899999999999996
No 17
>PRK07103 polyketide beta-ketoacyl:acyl carrier protein synthase; Validated
Probab=100.00 E-value=1.8e-45 Score=328.05 Aligned_cols=265 Identities=14% Similarity=0.159 Sum_probs=225.1
Q ss_pred hhhhhhhcCCCcccccCCCCCC----------C-CCCCCCCCCCcccCCCCHHHHhhcChHHHHHHHHHHHHHHHCCCCC
Q psy4744 2 EFNTGVARRNCPIKIKSSHNTP----------A-SKLQTITKFDQTFFSLHSRLANVLDPLVRCFIEPCFEAILDAGINP 70 (270)
Q Consensus 2 ~~w~~l~~g~~~~~~~~~~~~~----------~-~~~~~~~~fd~~~~~~~~~~~~~~~~~~~l~l~a~~~Al~dAg~~~ 70 (270)
|||++|.+|+++++.++.++.. . .+..++++|+.+.+ ++++..+++++..+|++.++++||+|||++
T Consensus 21 ~~w~~l~~g~s~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~r~~~~~~~lal~Aa~eAl~dAgl~- 98 (410)
T PRK07103 21 SFAAALLAGRHAFGVMRRPGRQVPDDAGAGLASAFIGAELDSLALPER-LDAKLLRRASLSAQAALAAAREAWRDAALG- 98 (410)
T ss_pred HHHHHHHcCCCeEecCCcccccccccccccCCCceEEEEeCCCChhhc-CCHHHhhcCCHHHHHHHHHHHHHHHhcCcC-
Confidence 7999999999999987754321 1 22345666777665 788899999999999999999999999994
Q ss_pred CCCCCCCeEEEEccCCCCccc-------cccCccccchhhHhhhhhhhHHHHHHHHcCCCCCCccccccchhHHHHHHHH
Q psy4744 71 KSLAGSNSSVYTNSCISDDES-------LGCDERLTTNFWLLAHVRCLLANRIAYLFDLKGPSFTIDNSWTGGIEVLRQA 143 (270)
Q Consensus 71 ~~~~~~~~gv~~g~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl~Gp~~~v~~~cas~~~al~~A 143 (270)
+.+..++||++|++...... +........|.+....+++.++++|+..||++||+++++++|+|++.||..|
T Consensus 99 -~~~~~riGvivG~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl~G~~~tv~~acas~~~Al~~A 177 (410)
T PRK07103 99 -PVDPDRIGLVVGGSNLQQREQALVHETYRDRPAFLRPSYGLSFMDTDLVGLCSEQFGIRGEGFTVGGASASGQLAVIQA 177 (410)
T ss_pred -CCCCCCEEEEEccCCcchHHHHHHHHHhccCccccChhhhhhhcchHHHHHHHHHhCCCCCcccccchhHHHHHHHHHH
Confidence 45678999999977644221 1123344566677777788899999999999999999999999999999999
Q ss_pred HHHHhcCCCCEEEEeeeccccCchhHHhhhcCcccC-------CCCCCcccCCCCCceeecCeeEEEEecChHHHHhhcC
Q psy4744 144 VQDISEGRVDTAIVGVSNLLLNANLNSLFQGLNRLS-------PDGKTRSFDHLANGYARSEGIVVLLLQRSETALRSYG 216 (270)
Q Consensus 144 ~~~i~~G~~d~~lv~g~~~~~~~~~~~~~~~~~~ls-------~~~~~~pfd~~~~g~~~geGA~alvL~~~~~A~~~~g 216 (270)
+++|++|++|.+||+|++..+++.....|..++.++ |...|||||.+++|+++|||++++|||++++|+++ +
T Consensus 178 ~~~I~~G~~d~~lv~g~~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~rPfd~~~dG~v~gEGaaalvLe~~~~A~~~-g 256 (410)
T PRK07103 178 ARLVQSGSVDACIAVGALMDLSYWECQALRSLGAMGSDRFADEPEAACRPFDQDRDGFIYGEACGAVVLESAESARRR-G 256 (410)
T ss_pred HHHHHcCCCCEEEEecccccCCHHHHHHHHHccccccCccCCCcccCcCCCCCCCCCeeEeeeEEEEEEccHHHHHHC-C
Confidence 999999999999999998778898888888888765 45689999999999999999999999999999988 8
Q ss_pred ceEeEEEeccCCCCCC--CcCCCHHHHHHHHHHHHHHcCCCCCCccEEEcccCCCC
Q psy4744 217 EVLHAESRFYGSLERP--FVGFNQASLVEFFTNFYQKARVNPGQVDFLEADGSAIK 270 (270)
Q Consensus 217 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~a~~~al~~agi~~~did~v~~hgtgt~ 270 (270)
..+++.+.+++...++ .+.|+..++.++++++|+++|++|+|||||++|||||+
T Consensus 257 ~~i~a~I~g~~~~~d~~~~~~p~~~~~~~a~~~Al~~Agi~~~dId~v~~hgtgt~ 312 (410)
T PRK07103 257 ARPYAKLLGWSMRLDANRGPDPSLEGEMRVIRAALRRAGLGPEDIDYVNPHGTGSP 312 (410)
T ss_pred CceEEEEEEEEEecCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHCCEEEccCCCCC
Confidence 8889999888875544 35678888999999999999999999999999999996
No 18
>PLN02836 3-oxoacyl-[acyl-carrier-protein] synthase
Probab=100.00 E-value=1.5e-45 Score=330.68 Aligned_cols=264 Identities=20% Similarity=0.266 Sum_probs=221.6
Q ss_pred hhhhhhhcCCCcccccCCCCC-----------------CC---CCC---CCCCCCCcccCCCCHHHHhhcChHHHHHHHH
Q psy4744 2 EFNTGVARRNCPIKIKSSHNT-----------------PA---SKL---QTITKFDQTFFSLHSRLANVLDPLVRCFIEP 58 (270)
Q Consensus 2 ~~w~~l~~g~~~~~~~~~~~~-----------------~~---~~~---~~~~~fd~~~~~~~~~~~~~~~~~~~l~l~a 58 (270)
+||++|.+|++.++.++.+++ +. +.+ ..++.||+++|.. .+++++..+|++.+
T Consensus 25 ~~w~~L~~G~s~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~~~~----~~~~~~~~~~~~~a 100 (437)
T PLN02836 25 TTWRRLIAGECGVRALTQDDLKMKSEDEETQLYTLDQLPSRVAALVPRGTGPGDFDEELWLN----SRSSSRFIGYALCA 100 (437)
T ss_pred HHHHHHHcCCCccccCChhhhccccccccccccccccCCccEEEEeccccccccCChHHhcc----ccccCHHHHHHHHH
Confidence 799999999999988765432 11 111 1124577777633 35789999999999
Q ss_pred HHHHHHHCCCCCCC-CCCCCeEEEEccCCCCccc--------cccCccccchhhHhhhhhhhHHHHHHHHcCCCCCCccc
Q psy4744 59 CFEAILDAGINPKS-LAGSNSSVYTNSCISDDES--------LGCDERLTTNFWLLAHVRCLLANRIAYLFDLKGPSFTI 129 (270)
Q Consensus 59 ~~~Al~dAg~~~~~-~~~~~~gv~~g~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl~Gp~~~v 129 (270)
+++||+|||+.+.. .+..++||++|++.+.+.. .+...+.++|+.++..+.|.++++|+..||++||+++|
T Consensus 101 a~~Al~dAg~~~~~~~~~~~~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n~~a~~is~~~gl~Gp~~tv 180 (437)
T PLN02836 101 ADEALSDARWLPSEDEAKERTGVSIGGGIGSITDILEAAQLICEKRLRRLSPFFVPRILINMAAGHVSIRYGFQGPNHAA 180 (437)
T ss_pred HHHHHHHcCCCcccccCCcCEEEEEeeccCcHHHHHHHHHHHHhcCCCCCChhhhhhhcccHHHHHHHHHhCCCCceece
Confidence 99999999997643 4668999999998766432 12234567888999999999999999999999999999
Q ss_pred cccchhHHHHHHHHHHHHhcCCCCEEEEeeeccccCchhHHhhhcCcccC------CCCCCcccCCCCCceeecCeeEEE
Q psy4744 130 DNSWTGGIEVLRQAVQDISEGRVDTAIVGVSNLLLNANLNSLFQGLNRLS------PDGKTRSFDHLANGYARSEGIVVL 203 (270)
Q Consensus 130 ~~~cas~~~al~~A~~~i~~G~~d~~lv~g~~~~~~~~~~~~~~~~~~ls------~~~~~~pfd~~~~g~~~geGA~al 203 (270)
+++|+|++.||..|+++|++|++|++||+|+|...++..+..|..++.++ ++..|||||.+++|+++||||+++
T Consensus 181 ~~acaSg~~Al~~A~~~I~~G~~d~~lvgg~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~pfd~~~~G~~~gEGaaal 260 (437)
T PLN02836 181 VTACATGAHSIGDAFRMIQFGDADVMVAGGTESSIDALSIAGFSRSRALSTKFNSCPTEASRPFDCDRDGFVIGEGAGVL 260 (437)
T ss_pred eChhHHHHHHHHHHHHHHHcCCCCEEEEccccccCCHHHHHHHHHhhhhhcccCCCcccccCCcccCCCCeeeecCEEEE
Confidence 99999999999999999999999999999999988888888888877765 456899999999999999999999
Q ss_pred EecChHHHHhhcCceEeEEEeccCCCCCCC--cCC--CHHHHHHHHHHHHHHcCCCCCCccEEEcccCCCC
Q psy4744 204 LLQRSETALRSYGEVLHAESRFYGSLERPF--VGF--NQASLVEFFTNFYQKARVNPGQVDFLEADGSAIK 270 (270)
Q Consensus 204 vL~~~~~A~~~~g~~~~~~~~~~~~~~~~~--~~~--~~~~~~~a~~~al~~agi~~~did~v~~hgtgt~ 270 (270)
|||++++|+++ +..+++.+.+++..+++. ..| +..+..+++++||++|||+|+||||||+|||||+
T Consensus 261 VLe~~~~A~~~-g~~i~a~I~g~~~~~d~~~~~~p~~~~~~~~~a~~~Al~~Agi~~~dId~ve~hgtgt~ 330 (437)
T PLN02836 261 VLEELEHAKRR-GAKIYAEVRGYGMSGDAHHITQPHEDGRGAVLAMTRALQQSGLHPNQVDYVNAHATSTP 330 (437)
T ss_pred EEeeHHHHHHC-CCceEEEEEeeeecCCCCCCcCCCcchHHHHHHHHHHHHHcCCCHhHcCEEEccCCcCc
Confidence 99999999988 888999999988765543 334 4566789999999999999999999999999995
No 19
>cd00828 elong_cond_enzymes "elongating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type I and II and polyketide synthases.They are characterized by the utlization of acyl carrier protein (ACP) thioesters as primer substrates, as well as the nature of their active site residues.
Probab=100.00 E-value=2e-45 Score=328.67 Aligned_cols=262 Identities=22% Similarity=0.193 Sum_probs=225.5
Q ss_pred hhhhhhhcCCCcccccCCCC--CCCCCCCCCCCCCcccCCCCHHHHhhc---ChHHHHHHHHHHHHHHHCCCCCCC-CCC
Q psy4744 2 EFNTGVARRNCPIKIKSSHN--TPASKLQTITKFDQTFFSLHSRLANVL---DPLVRCFIEPCFEAILDAGINPKS-LAG 75 (270)
Q Consensus 2 ~~w~~l~~g~~~~~~~~~~~--~~~~~~~~~~~fd~~~~~~~~~~~~~~---~~~~~l~l~a~~~Al~dAg~~~~~-~~~ 75 (270)
+||+.|.+|+++++.++.+. .+....+.++.|+ ++++..+++ +++++|++.++++||+|||+++++ ++.
T Consensus 23 ~~w~~l~~g~s~i~~~~~~~~~~~~~~~g~i~~~~-----~~~~~~~~~~~~~~~~~l~~~aa~~Al~dAGl~~~~~~~~ 97 (407)
T cd00828 23 EFWEALREGRSGIAPVARLKSRFDRGVAGQIPTGD-----IPGWDAKRTGIVDRTTLLALVATEEALADAGITDPYEVHP 97 (407)
T ss_pred HHHHHHHcCCCceeeCCcccccCCccEEEEccCCC-----cCHHHHHhccCCCHHHHHHHHHHHHHHHhCCCCccccCCc
Confidence 79999999999999877653 2223444555555 678888888 999999999999999999998888 888
Q ss_pred CCeEEEEccCCCCccccccCc----cccchhhHhhhhh--hhHHHHHHHHcCC-CCCCccccccchhHHHHHHHHHHHHh
Q psy4744 76 SNSSVYTNSCISDDESLGCDE----RLTTNFWLLAHVR--CLLANRIAYLFDL-KGPSFTIDNSWTGGIEVLRQAVQDIS 148 (270)
Q Consensus 76 ~~~gv~~g~~~~~~~~~~~~~----~~~~~~~~~~~~~--~~~a~~ia~~~gl-~Gp~~~v~~~cas~~~al~~A~~~i~ 148 (270)
.++|+++|+..+++...+... +...++.++..+. +.++.+++..||+ +||+++|+++|+|++.||..|+++|+
T Consensus 98 ~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl~~Gp~~tv~~aCaS~~~Al~~A~~~I~ 177 (407)
T cd00828 98 SEVGVVVGSGMGGLRFLRRGGKLDARAVNPYVSPKWMLSPNTVAGWVNILLLSSHGPIKTPVGACATALEALDLAVEAIR 177 (407)
T ss_pred cCeEEEEeeccCCHHHHHHHHHHHhhccCCcccchhccccchHHHHHHHHhCcCCCCCcCcccHHHHHHHHHHHHHHHHH
Confidence 999999999888754422211 2345666777776 9999999999999 99999999999999999999999999
Q ss_pred cCCCCEEEEeeeccccCchhHHhhhcCcccCCC-----CCCcccCCCCCceeecCeeEEEEecChHHHHhhcCceEeEEE
Q psy4744 149 EGRVDTAIVGVSNLLLNANLNSLFQGLNRLSPD-----GKTRSFDHLANGYARSEGIVVLLLQRSETALRSYGEVLHAES 223 (270)
Q Consensus 149 ~G~~d~~lv~g~~~~~~~~~~~~~~~~~~ls~~-----~~~~pfd~~~~g~~~geGA~alvL~~~~~A~~~~g~~~~~~~ 223 (270)
+|++|++||+|+|.+. +.....|..++.++.+ ..|+|||.+++|+++||||+++|||++++|+++ |..+++.+
T Consensus 178 ~G~~d~~lvgg~d~~~-~~~~~~f~~~~~ls~~~~~~~~~~~pfd~~~~G~~~gEGAaalvLe~~~~A~~r-g~~i~a~i 255 (407)
T cd00828 178 SGKADIVVVGGVEDPL-EEGLSGFANMGALSTAEEEPEEMSRPFDETRDGFVEAEGAGVLVLERAELALAR-GAPIYGRV 255 (407)
T ss_pred cCCCCEEEEccccccC-hHHHHHHHHcCCCCCCCCCCCcccCCCcCCCCcEEeecceEEEEEeeHHHHHHC-CCeEEEEE
Confidence 9999999999999977 8888889999999854 689999999999999999999999999999988 89999999
Q ss_pred eccCCCCCCC--cCC-CHHHHHHHHHHHHHHcCCCCCCccEEEcccCCCC
Q psy4744 224 RFYGSLERPF--VGF-NQASLVEFFTNFYQKARVNPGQVDFLEADGSAIK 270 (270)
Q Consensus 224 ~~~~~~~~~~--~~~-~~~~~~~a~~~al~~agi~~~did~v~~hgtgt~ 270 (270)
.+++..+++. ..+ +..++.++|+++|+++|++|+||||||+|||||+
T Consensus 256 ~g~~~~~d~~~~~~~~~~~~~~~a~~~Al~~Agi~~~dId~i~~hgtgt~ 305 (407)
T cd00828 256 AGTASTTDGAGRSVPAGGKGIARAIRTALAKAGLSLDDLDVISAHGTSTP 305 (407)
T ss_pred EEEEeccCCCCCCCCCChHHHHHHHHHHHHHcCCCHHHcCEEecccccCc
Confidence 9988765543 222 5688999999999999999999999999999996
No 20
>smart00825 PKS_KS Beta-ketoacyl synthase. The structure of beta-ketoacyl synthase is similar to that of the thiolase family and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains.
Probab=100.00 E-value=4.6e-45 Score=328.01 Aligned_cols=268 Identities=32% Similarity=0.495 Sum_probs=234.4
Q ss_pred hhhhhhhcCCCcccccCCCCC--------------------CCCCCCCCCCCCcccCCCCHHHHhhcChHHHHHHHHHHH
Q psy4744 2 EFNTGVARRNCPIKIKSSHNT--------------------PASKLQTITKFDQTFFSLHSRLANVLDPLVRCFIEPCFE 61 (270)
Q Consensus 2 ~~w~~l~~g~~~~~~~~~~~~--------------------~~~~~~~~~~fd~~~~~~~~~~~~~~~~~~~l~l~a~~~ 61 (270)
+||++|.+|+++++..+...+ ..+.+.++.+||++.|++++++.+.+++.++|+++++++
T Consensus 18 ~~~~~l~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~~~~~i~~~~~~~~~~~~~l~~~aa~~ 97 (424)
T smart00825 18 EFWDLLREGRDAITEIPADRWDADAFYYDPDPDRPGKSYVRWGGFLDDVDLFDAAFFGISPREAEAMDPQQRLLLEVAWE 97 (424)
T ss_pred HHHHHHHcCCcccccCChHHcCccccccccccccCCCcccccceecCchhhCCHhHcCCCHHHHHhcCHHHHHHHHHHHH
Confidence 799999999999987642111 113444566799999999999999999999999999999
Q ss_pred HHHHCCCCCCCCCCCCeEEEEccCCCCccc-cccCccccchhhHhhhhhhhHHHHHHHHcCCCCCCccccccchhHHHHH
Q psy4744 62 AILDAGINPKSLAGSNSSVYTNSCISDDES-LGCDERLTTNFWLLAHVRCLLANRIAYLFDLKGPSFTIDNSWTGGIEVL 140 (270)
Q Consensus 62 Al~dAg~~~~~~~~~~~gv~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl~Gp~~~v~~~cas~~~al 140 (270)
||+|||+++.+++..++||++|+...++.. .........++.++..+.+..+.+++..||++||+++++++|+|++.||
T Consensus 98 Al~dAGl~~~~id~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~lgl~g~~~~v~~acasg~~Al 177 (424)
T smart00825 98 ALEDAGIDPESLRGSRTGVFVGAMSSDYAELLARDPEDIEGYAATGTARSFIANRISYFFDLRGPSVTVDTACSSSLVAL 177 (424)
T ss_pred HHHHcCCChhHcCCCCCEEEEEEcHHHHHHHHhhCccccchhhhccchhHHHHHHHHHHhCCCCCccccccHhHHHHHHH
Confidence 999999999999989999999988777654 2233445566777778888899999999999999999999999999999
Q ss_pred HHHHHHHhcCCCCEEEEeeeccccCchhHHhhhcCcccCCCCCCcccCCCCCceeecCeeEEEEecChHHHHhhcCceEe
Q psy4744 141 RQAVQDISEGRVDTAIVGVSNLLLNANLNSLFQGLNRLSPDGKTRSFDHLANGYARSEGIVVLLLQRSETALRSYGEVLH 220 (270)
Q Consensus 141 ~~A~~~i~~G~~d~~lv~g~~~~~~~~~~~~~~~~~~ls~~~~~~pfd~~~~g~~~geGA~alvL~~~~~A~~~~g~~~~ 220 (270)
..|+++|++|++|+|||+|+|...++.....|..++.+++++.++|||.+++|+++||||+++||+++++|+++ +..++
T Consensus 178 ~~A~~~I~~G~~d~vlvgg~~~~~~~~~~~~~~~~~~l~~~~~~~pf~~~~~g~~~geGAaalVLe~~e~A~~~-g~~i~ 256 (424)
T smart00825 178 HLACQSLRSGECDMALAGGVNLILSPDTFVGFSRAGMLSPDGRCKTFDADADGYVRGEGVGVVVLKRLSDALRD-GDPIL 256 (424)
T ss_pred HHHHHHHHcCCCCeeEEeeeeecCCHHHHHHHhhcCCCCCCCCCCCCCCCCCcccccceEEEEEEccHHHHHHC-CCeEE
Confidence 99999999999999999999998888888889999999999999999999999999999999999999999987 88888
Q ss_pred EEEeccCCCCCC----CcCCCHHHHHHHHHHHHHHcCCCCCCccEEEcccCCCC
Q psy4744 221 AESRFYGSLERP----FVGFNQASLVEFFTNFYQKARVNPGQVDFLEADGSAIK 270 (270)
Q Consensus 221 ~~~~~~~~~~~~----~~~~~~~~~~~a~~~al~~agi~~~did~v~~hgtgt~ 270 (270)
+.+.+++...++ ...|+...+.++++++|+++|++++|||||++|||||+
T Consensus 257 a~I~g~~~~~~~~~~~~~~~~~~~~~~a~~~al~~Agl~~~dId~i~~h~tgt~ 310 (424)
T smart00825 257 AVIRGSAVNQDGRSNGLTAPSGPAQARLIRQALARAGVDPADVDYVEAHGTGTP 310 (424)
T ss_pred EEEEEEEEeCCCCCCCCCCcCHHHHHHHHHHHHHHhCCCHHHccEEEeeCCCCC
Confidence 888887754433 24577888999999999999999999999999999996
No 21
>cd00833 PKS polyketide synthases (PKSs) polymerize simple fatty acids into a large variety of different products, called polyketides, by successive decarboxylating Claisen condensations. PKSs can be divided into 2 groups, modular type I PKSs consisting of one or more large multifunctional proteins and iterative type II PKSs, complexes of several monofunctional subunits.
Probab=100.00 E-value=1.4e-44 Score=324.64 Aligned_cols=268 Identities=33% Similarity=0.513 Sum_probs=235.0
Q ss_pred hhhhhhhcCCCcccccCCCCCC------------------CCCCCCCCCCCcccCCCCHHHHhhcChHHHHHHHHHHHHH
Q psy4744 2 EFNTGVARRNCPIKIKSSHNTP------------------ASKLQTITKFDQTFFSLHSRLANVLDPLVRCFIEPCFEAI 63 (270)
Q Consensus 2 ~~w~~l~~g~~~~~~~~~~~~~------------------~~~~~~~~~fd~~~~~~~~~~~~~~~~~~~l~l~a~~~Al 63 (270)
+||++|.+|+++++.++...+. .+.+.+++.||+++|++++++.+.++++++|+++++.+||
T Consensus 20 ~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~aa~~AL 99 (421)
T cd00833 20 EFWENLLEGRDAISEIPEDRWDADGYYPDPGKPGKTYTRRGGFLDDVDAFDAAFFGISPREAEAMDPQQRLLLEVAWEAL 99 (421)
T ss_pred HHHHHHHcCCCcCcCCChhHcCccccccccccCCCcceecceecCCcccCCHhHcCCCHHHHHhcCHHHHHHHHHHHHHH
Confidence 7999999999999877632211 1455666678999899999999999999999999999999
Q ss_pred HHCCCCCCCCCCCCeEEEEccCCCCcccc-ccCccccchhhHhhhhhhhHHHHHHHHcCCCCCCccccccchhHHHHHHH
Q psy4744 64 LDAGINPKSLAGSNSSVYTNSCISDDESL-GCDERLTTNFWLLAHVRCLLANRIAYLFDLKGPSFTIDNSWTGGIEVLRQ 142 (270)
Q Consensus 64 ~dAg~~~~~~~~~~~gv~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl~Gp~~~v~~~cas~~~al~~ 142 (270)
+|||+++++++..++||++|+..+++... ......+.++.+.....+..+.+++..+|++||+++++++|+|++.||..
T Consensus 100 ~dAgl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~~gl~g~~~~v~~acas~~~Al~~ 179 (421)
T cd00833 100 EDAGYSPESLAGSRTGVFVGASSSDYLELLARDPDEIDAYAATGTSRAFLANRISYFFDLRGPSLTVDTACSSSLVALHL 179 (421)
T ss_pred HHcCCCchhcCCCCceEEeCcCHHHHHHHHhhcccccCcccccCcchHHHHHHHHHHcCCCCCceeeccHhHHHHHHHHH
Confidence 99999988889999999999988865442 22223456777778888889999999999999999999999999999999
Q ss_pred HHHHHhcCCCCEEEEeeeccccCchhHHhhhcCcccCCCCCCcccCCCCCceeecCeeEEEEecChHHHHhhcCceEeEE
Q psy4744 143 AVQDISEGRVDTAIVGVSNLLLNANLNSLFQGLNRLSPDGKTRSFDHLANGYARSEGIVVLLLQRSETALRSYGEVLHAE 222 (270)
Q Consensus 143 A~~~i~~G~~d~~lv~g~~~~~~~~~~~~~~~~~~ls~~~~~~pfd~~~~g~~~geGA~alvL~~~~~A~~~~g~~~~~~ 222 (270)
|+++|++|++|++||+|+|...++.....+..++.+++...++|||.+++|+++||||+++||++++.|+++ +..+++.
T Consensus 180 A~~~I~~G~~d~~lvgg~~~~~~~~~~~~~~~~~~l~~~~~~~pf~~~~~g~~~geGAaalvL~~~~~A~~~-g~~~~a~ 258 (421)
T cd00833 180 ACQSLRSGECDLALVGGVNLILSPDMFVGFSKAGMLSPDGRCRPFDADADGYVRGEGVGVVVLKRLSDALRD-GDRIYAV 258 (421)
T ss_pred HHHHHHcCCCCeeEEeeeeccCCHHHHHHHhhCCCCCCCCCCCCCCCCCCCeeeeceEEEEEEeeHHHHHHC-CCeEEEE
Confidence 999999999999999999998888888889999999988899999999999999999999999999999887 8888888
Q ss_pred EeccCCCCCCC----cCCCHHHHHHHHHHHHHHcCCCCCCccEEEcccCCCC
Q psy4744 223 SRFYGSLERPF----VGFNQASLVEFFTNFYQKARVNPGQVDFLEADGSAIK 270 (270)
Q Consensus 223 ~~~~~~~~~~~----~~~~~~~~~~a~~~al~~agi~~~did~v~~hgtgt~ 270 (270)
+.+++...++. ..|+..++.++++++|+++|++++|||||++|||||+
T Consensus 259 i~g~~~~~~~~~~~~~~p~~~~~~~a~~~al~~Agi~~~did~i~~hgtgt~ 310 (421)
T cd00833 259 IRGSAVNQDGRTKGITAPSGEAQAALIRRAYARAGVDPSDIDYVEAHGTGTP 310 (421)
T ss_pred EEEEEEcCCCCCCCCcCCCHHHHHHHHHHHHHHhCCCHHHCcEEEeeCCCCC
Confidence 88887654432 3456888999999999999999999999999999995
No 22
>cd00834 KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II. KASs are responsible for the elongation steps in fatty acid biosynthesis. KASIII catalyses the initial condensation and KAS I and II catalyze further elongation steps by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP.
Probab=100.00 E-value=3.1e-44 Score=321.01 Aligned_cols=267 Identities=22% Similarity=0.338 Sum_probs=233.1
Q ss_pred hhhhhhhcCCCcccccCCCCCC---CCCCCCCCCCCcccCCCCHHHHhhcChHHHHHHHHHHHHHHHCCCCCCCCCCCCe
Q psy4744 2 EFNTGVARRNCPIKIKSSHNTP---ASKLQTITKFDQTFFSLHSRLANVLDPLVRCFIEPCFEAILDAGINPKSLAGSNS 78 (270)
Q Consensus 2 ~~w~~l~~g~~~~~~~~~~~~~---~~~~~~~~~fd~~~~~~~~~~~~~~~~~~~l~l~a~~~Al~dAg~~~~~~~~~~~ 78 (270)
+||++|.+|++.++.++.++.. ..+.+.++.|+++ +.+++++.+.|+++++|+++++++||+|||+++++++..++
T Consensus 20 ~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~~~~l~~~aa~~AL~dAgl~~~~~~~~~~ 98 (406)
T cd00834 20 EFWEALLAGRSGIRPITRFDASGFPSRIAGEVPDFDPE-DYLDRKELRRMDRFAQFALAAAEEALADAGLDPEELDPERI 98 (406)
T ss_pred HHHHHHHcCCCeeEECCcccccCCCccEEEEcCCCChh-hcCCHHHhccCCHHHHHHHHHHHHHHHHcCCCcccCCccce
Confidence 7999999999999887755432 2444567778887 56999999999999999999999999999999999999999
Q ss_pred EEEEccCCCCcccc--------ccCccccchhhHhhhhhhhHHHHHHHHcCCCCCCccccccchhHHHHHHHHHHHHhcC
Q psy4744 79 SVYTNSCISDDESL--------GCDERLTTNFWLLAHVRCLLANRIAYLFDLKGPSFTIDNSWTGGIEVLRQAVQDISEG 150 (270)
Q Consensus 79 gv~~g~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl~Gp~~~v~~~cas~~~al~~A~~~i~~G 150 (270)
|+++|++.+++... ....+.++|+.++....+.++.+++..||++||+++++++|+|++.||..|+++|++|
T Consensus 99 gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~g~~~~v~~acas~~~Al~~A~~~i~~G 178 (406)
T cd00834 99 GVVIGSGIGGLATIEEAYRALLEKGPRRVSPFFVPMALPNMAAGQVAIRLGLRGPNYTVSTACASGAHAIGDAARLIRLG 178 (406)
T ss_pred EEEEccCCcchHHHHHHHHHHHhcCCcccChhHHhhhcccHHHHHHHHHhCCCCcccccchHHHHHHHHHHHHHHHHHcC
Confidence 99999998875432 2233456777888888899999999999999999999999999999999999999999
Q ss_pred CCCEEEEeeeccccCchhHHhhhcCcccCCC-----CCCcccCCCCCceeecCeeEEEEecChHHHHhhcCceEeEEEec
Q psy4744 151 RVDTAIVGVSNLLLNANLNSLFQGLNRLSPD-----GKTRSFDHLANGYARSEGIVVLLLQRSETALRSYGEVLHAESRF 225 (270)
Q Consensus 151 ~~d~~lv~g~~~~~~~~~~~~~~~~~~ls~~-----~~~~pfd~~~~g~~~geGA~alvL~~~~~A~~~~g~~~~~~~~~ 225 (270)
++|.+||+|+|....+.....|..++.++.+ ..++|||.+++|+++||||+++||++.++|+++ +..+++.+.+
T Consensus 179 ~~d~aLvgg~d~~~~p~~~~~~~~~~~l~~~~~~p~~~~~pf~~~~~g~~~geGA~a~vL~~~~~A~~~-g~~~~a~i~g 257 (406)
T cd00834 179 RADVVIAGGAEALITPLTLAGFAALRALSTRNDDPEKASRPFDKDRDGFVLGEGAGVLVLESLEHAKAR-GAKIYAEILG 257 (406)
T ss_pred CCCEEEEcCcccccCHHHHHHHHhcCCcCCCCCCCccCCCCCCCCCCCEeeeccEEEEEEecHHHHHHC-CCeEEEEEEE
Confidence 9999999999998889999999999998865 479999999999999999999999999999887 8888888888
Q ss_pred cCCCCCCC--cC--CCHHHHHHHHHHHHHHcCCCCCCccEEEcccCCCC
Q psy4744 226 YGSLERPF--VG--FNQASLVEFFTNFYQKARVNPGQVDFLEADGSAIK 270 (270)
Q Consensus 226 ~~~~~~~~--~~--~~~~~~~~a~~~al~~agi~~~did~v~~hgtgt~ 270 (270)
++...++. .. |...++.++++++|+++|++++|||||++|||||+
T Consensus 258 ~~~~~d~~~~~~~~~~~~~~~~~i~~al~~agi~~~dId~v~~h~tgt~ 306 (406)
T cd00834 258 YGASSDAYHITAPDPDGEGAARAMRAALADAGLSPEDIDYINAHGTSTP 306 (406)
T ss_pred EEecccCCCCCCCCCCcHHHHHHHHHHHHHcCCCHHHCCEEecccccCc
Confidence 87654433 23 34788999999999999999999999999999995
No 23
>PRK14691 3-oxoacyl-(acyl carrier protein) synthase II; Provisional
Probab=100.00 E-value=2.2e-44 Score=311.62 Aligned_cols=219 Identities=19% Similarity=0.245 Sum_probs=197.7
Q ss_pred cChHHHHHHHHHHHHHHHCCCCCCCCCCCCeEEEEccCCCCcccc--------ccCccccchhhHhhhhhhhHHHHHHHH
Q psy4744 48 LDPLVRCFIEPCFEAILDAGINPKSLAGSNSSVYTNSCISDDESL--------GCDERLTTNFWLLAHVRCLLANRIAYL 119 (270)
Q Consensus 48 ~~~~~~l~l~a~~~Al~dAg~~~~~~~~~~~gv~~g~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~a~~ia~~ 119 (270)
+++..+|++.++++||+|||+. .++.++||++|++.+....+ +...+.++|+.++..+.|.++.+++..
T Consensus 1 ~~~~~~~~~~a~~~a~~~a~~~---~~~~r~Gv~~G~~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n~~a~~is~~ 77 (342)
T PRK14691 1 MGRWWRYKWITFHPSLTHADNT---EKQERTATIIGAGIGGFPAIAHAVRTSDSRGPKRLSPFTVPSFLVNLAAGHVSIK 77 (342)
T ss_pred CCHHHHHHHHHHHHHHHhCCCC---CCcccEEEEEecCcccHHHHHHHHHHHHhcCccccChhHHhhhhhhHHHHHHHHH
Confidence 4678899999999999999986 45679999999998875332 234567789999999999999999999
Q ss_pred cCCCCCCccccccchhHHHHHHHHHHHHhcCCCCEEEEeeeccccCchhHHhhhcCcccC------CCCCCcccCCCCCc
Q psy4744 120 FDLKGPSFTIDNSWTGGIEVLRQAVQDISEGRVDTAIVGVSNLLLNANLNSLFQGLNRLS------PDGKTRSFDHLANG 193 (270)
Q Consensus 120 ~gl~Gp~~~v~~~cas~~~al~~A~~~i~~G~~d~~lv~g~~~~~~~~~~~~~~~~~~ls------~~~~~~pfd~~~~g 193 (270)
||++||+++++++|+|++.||..|+++|+.|++|++||+|+|...++..+..|..++.++ |+..|||||++|+|
T Consensus 78 ~~l~Gp~~ti~~aCaSg~~Al~~A~~~I~~G~~d~~ivgg~d~~~~~~~~~~f~~~~~ls~~~~~~p~~~~rPFd~~r~G 157 (342)
T PRK14691 78 HHFKGPIGAPVTACAAGVQAIGDAVRMIRNNEADVALCGGAEAVIDTVSLAGFAAARALSTHFNSTPEKASRPFDTARDG 157 (342)
T ss_pred hCCCCCccccccHhHHHHHHHHHHHHHHHcCCCCEEEEecccccCCHHHHHHHHHhhhhhcCCCCCCCcCCCCCCCCCCC
Confidence 999999999999999999999999999999999999999999989999888899888886 56789999999999
Q ss_pred eeecCeeEEEEecChHHHHhhcCceEeEEEeccCCCCCCC----cCCCHHHHHHHHHHHHHHcCCCCCCccEEEcccCCC
Q psy4744 194 YARSEGIVVLLLQRSETALRSYGEVLHAESRFYGSLERPF----VGFNQASLVEFFTNFYQKARVNPGQVDFLEADGSAI 269 (270)
Q Consensus 194 ~~~geGA~alvL~~~~~A~~~~g~~~~~~~~~~~~~~~~~----~~~~~~~~~~a~~~al~~agi~~~did~v~~hgtgt 269 (270)
+++||||+++|||++++|+++ |..+++++.+++...+.. ..|+..++.++|+++|+++||+|+||||||+|||||
T Consensus 158 ~v~gEGAa~lvLes~~~A~~r-G~~i~a~I~g~~~~~d~~~~~~p~p~~~~~~~ai~~AL~~Agl~p~dIdyIeaHgtgT 236 (342)
T PRK14691 158 FVMGEGAGLLIIEELEHALAR-GAKPLAEIVGYGTSADAYHMTSGAEDGDGAYRAMKIALRQAGITPEQVQHLNAHATST 236 (342)
T ss_pred ccccceEEEEEEeeHHHHHhC-CCCceEEEEEEEEEcCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHCCEEEecCCCC
Confidence 999999999999999999998 889999999988765543 346778899999999999999999999999999999
Q ss_pred C
Q psy4744 270 K 270 (270)
Q Consensus 270 ~ 270 (270)
+
T Consensus 237 ~ 237 (342)
T PRK14691 237 P 237 (342)
T ss_pred c
Confidence 6
No 24
>PRK05952 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=100.00 E-value=3.7e-44 Score=315.02 Aligned_cols=251 Identities=17% Similarity=0.206 Sum_probs=207.6
Q ss_pred hhhhhhhcCCCcccccCCCCCCCCCCCCCCCCCcccCCCCHHHHhhcChHHHHHHHHHHHHHHHCCCCCCCCCCCCeEEE
Q psy4744 2 EFNTGVARRNCPIKIKSSHNTPASKLQTITKFDQTFFSLHSRLANVLDPLVRCFIEPCFEAILDAGINPKSLAGSNSSVY 81 (270)
Q Consensus 2 ~~w~~l~~g~~~~~~~~~~~~~~~~~~~~~~fd~~~~~~~~~~~~~~~~~~~l~l~a~~~Al~dAg~~~~~~~~~~~gv~ 81 (270)
|||++|++|+++|+..+.+.. +..|....++..+ ..+ .+++..++.+||+|+|++.+ ..++||+
T Consensus 20 ~~~~~l~~G~sgi~~~~~~~~-------~~~~~~~~~~~~~---~~~---~~~~~~a~~~Al~dagl~~~---~~~~Gv~ 83 (381)
T PRK05952 20 QSWQRLLQGKSGIKLHQPFPE-------LPPLPLGLIGNQP---SSL---EDLTKTVVTAALKDAGLTPP---LTDCGVV 83 (381)
T ss_pred HHHHHHHcCCCCeEeCCcccc-------cccccceeecccc---ccc---cHHHHHHHHHHHHhcCCCCC---CCCEEEE
Confidence 899999999999987765431 1111111111111 112 33566899999999999643 3789999
Q ss_pred EccCCCCcccccc--------C---ccccchhhHhhhhhhhHHHHHHHHcCCCCCCccccccchhHHHHHHHHHHHHhcC
Q psy4744 82 TNSCISDDESLGC--------D---ERLTTNFWLLAHVRCLLANRIAYLFDLKGPSFTIDNSWTGGIEVLRQAVQDISEG 150 (270)
Q Consensus 82 ~g~~~~~~~~~~~--------~---~~~~~~~~~~~~~~~~~a~~ia~~~gl~Gp~~~v~~~cas~~~al~~A~~~i~~G 150 (270)
+|++.+.....+. . .....|..++..++|.++.+++..||++||++++.++|+|++.||..|+++|++|
T Consensus 84 ~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~~~~~Gp~~ti~~aCasg~~Ai~~A~~~i~~G 163 (381)
T PRK05952 84 IGSSRGCQGQWEKLARQMYQGDDSPDEELDLENWLDTLPHQAAIAAARQIGTQGPVLAPMAACATGLWAIAQGVELIQTG 163 (381)
T ss_pred EeeCcchHHHHHHHHHHHhhcCCccccccCHHHHHHhcccHHHHHHHHHhCCCCccccccchhHHHHHHHHHHHHHHHcC
Confidence 9998776332221 1 1245677888999999999999999999999999999999999999999999999
Q ss_pred CCCEEEEeeeccccCchhHHhhhcCcccCCCCCCcccCCCCCceeecCeeEEEEecChHHHHhhcCceEeEEEeccCCCC
Q psy4744 151 RVDTAIVGVSNLLLNANLNSLFQGLNRLSPDGKTRSFDHLANGYARSEGIVVLLLQRSETALRSYGEVLHAESRFYGSLE 230 (270)
Q Consensus 151 ~~d~~lv~g~~~~~~~~~~~~~~~~~~ls~~~~~~pfd~~~~g~~~geGA~alvL~~~~~A~~~~g~~~~~~~~~~~~~~ 230 (270)
++|++||+|+|...++..+..|..++.++.+ .|||||.+++|+++|||++++|||++++|+++ +..+++.+.+++..+
T Consensus 164 ~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~-~~rPfd~~r~G~v~gEGaa~lvLe~~~~A~~r-g~~i~a~I~g~~~~~ 241 (381)
T PRK05952 164 QCQRVIAGAVEAPITPLTLAGFQQMGALAKT-GAYPFDRQREGLVLGEGGAILVLESAELAQKR-GAKIYGQILGFGLTC 241 (381)
T ss_pred CCCEEEEccccccCCHHHHHHHHhcCCcCCC-CCCCCCCCCCCccccccEEEEEEeeHHHHHhC-CCceEEEEEEEEecC
Confidence 9999999999988999999999999999876 69999999999999999999999999999988 889999999988765
Q ss_pred CCC----cCCCHHHHHHHHHHHHHHcCCCCCCccEEEcccCCCC
Q psy4744 231 RPF----VGFNQASLVEFFTNFYQKARVNPGQVDFLEADGSAIK 270 (270)
Q Consensus 231 ~~~----~~~~~~~~~~a~~~al~~agi~~~did~v~~hgtgt~ 270 (270)
++. ..|+...+.++++++|+++|++|+||||||+|||||+
T Consensus 242 d~~~~~~~~~~~~~~~~ai~~Al~~agi~p~dId~i~~hgtgt~ 285 (381)
T PRK05952 242 DAYHMSAPEPDGKSAIAAIQQCLARSGLTPEDIDYIHAHGTATR 285 (381)
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHhCCCHHHeeEEEccCCCCC
Confidence 543 2346678899999999999999999999999999996
No 25
>KOG1202|consensus
Probab=100.00 E-value=1.7e-44 Score=332.98 Aligned_cols=269 Identities=36% Similarity=0.588 Sum_probs=248.6
Q ss_pred hhhhhhhcCCCcccccCCCC------CCC--CCCCCCCCCCcccCCCCHHHHhhcChHHHHHHHHHHHHHHHCCCCCCCC
Q psy4744 2 EFNTGVARRNCPIKIKSSHN------TPA--SKLQTITKFDQTFFSLHSRLANVLDPLVRCFIEPCFEAILDAGINPKSL 73 (270)
Q Consensus 2 ~~w~~l~~g~~~~~~~~~~~------~~~--~~~~~~~~fd~~~~~~~~~~~~~~~~~~~l~l~a~~~Al~dAg~~~~~~ 73 (270)
|||+.|..|.+.++..+... +|. +...++..||..+|++.++++..|||+.||++++.++|+-||||+|.++
T Consensus 30 eF~~nLl~g~DmVtdd~rrW~~G~ygLP~r~gKlKdL~kFDa~ff~vh~KQa~~MDPq~RlLLE~t~EAivDaGiNP~~L 109 (2376)
T KOG1202|consen 30 EFGDNLLAGVDMVTDDPRRWEAGLYGLPKRSGKLKDLNKFDAGFFGVHPKQANTMDPQLRLLLEATWEAIVDAGINPDDL 109 (2376)
T ss_pred HHhhhhhcccccccCCcccccccccCCchhhcchhhhhhhcccccCcCcccccccCHHHHHHHHHHHHHHHhCCCChhhc
Confidence 89999999999887554322 221 6677889999999999999999999999999999999999999999999
Q ss_pred CCCCeEEEEccCCCCccc-cccCccccchhhHhhhhhhhHHHHHHHHcCCCCCCccccccchhHHHHHHHHHHHHhcCCC
Q psy4744 74 AGSNSSVYTNSCISDDES-LGCDERLTTNFWLLAHVRCLLANRIAYLFDLKGPSFTIDNSWTGGIEVLRQAVQDISEGRV 152 (270)
Q Consensus 74 ~~~~~gv~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl~Gp~~~v~~~cas~~~al~~A~~~i~~G~~ 152 (270)
.++++||++|.+.++... +..++..+.-+...+....+.+.||++.|+++||++.++++|+|++.|+..|++.++.|+|
T Consensus 110 RGs~tGv~vg~s~seTs~~~~~dp~t~~Gy~mtgc~raMfaNRiSytFDfqGPS~s~DtacsSsl~al~~a~~~~r~gqc 189 (2376)
T KOG1202|consen 110 RGSRTGVFVGVSGSETSGALSQDPDTVNGYSMTGCVRAMFANRISYTFDFQGPSFSVDTACSSSLMALQNAFQDIRSGQC 189 (2376)
T ss_pred CcccceeEEeecCccccccccCCCccccceeecccHHHHhhcceeEEEeccCCchhhhhhhHHHHHHHHHHHHhhhccCC
Confidence 999999999998887654 4445555666777888889999999999999999999999999999999999999999999
Q ss_pred CEEEEeeeccccCchhHHhhhcCcccCCCCCCcccCCCCCceeecCeeEEEEecChHHHHhhcCceEeEEEeccCCCCCC
Q psy4744 153 DTAIVGVSNLLLNANLNSLFQGLNRLSPDGKTRSFDHLANGYARSEGIVVLLLQRSETALRSYGEVLHAESRFYGSLERP 232 (270)
Q Consensus 153 d~~lv~g~~~~~~~~~~~~~~~~~~ls~~~~~~pfd~~~~g~~~geGA~alvL~~~~~A~~~~g~~~~~~~~~~~~~~~~ 232 (270)
|.+||+|++..+.|.....|.++|++++++.|+.||...+||+.+||.++++|.+.+.|+|.|..+..++.+.+|....+
T Consensus 190 d~AiVaG~~liLkPt~slQFlRLgmls~dGsCkaFDeagnGY~Rseg~~avllqrk~~ArRvYAtilnartNTDGfKEqG 269 (2376)
T KOG1202|consen 190 DAAIVAGANLILKPTTSLQFLRLGMLSPDGSCKAFDEAGNGYCRSEGVVAVLLQRKSLARRVYATILNARTNTDGFKEQG 269 (2376)
T ss_pred chhhhcccceEeccchhhHHHHhcCcCCCCcccchhccCCceeecCceEEEEEehhHHHHHHHHHhhccccCCCchhhcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999988888
Q ss_pred CcCCCHHHHHHHHHHHHHHcCCCCCCccEEEcccCCCC
Q psy4744 233 FVGFNQASLVEFFTNFYQKARVNPGQVDFLEADGSAIK 270 (270)
Q Consensus 233 ~~~~~~~~~~~a~~~al~~agi~~~did~v~~hgtgt~ 270 (270)
.+.|+...+.+.+++.|+.+|+.|+++-|||+||||||
T Consensus 270 vTfP~G~~Q~qLi~e~Yse~Gl~P~sv~YvEAHGtGTk 307 (2376)
T KOG1202|consen 270 VTFPSGDMQEQLIRETYSEAGLNPESVVYVEAHGTGTK 307 (2376)
T ss_pred ccCCCcHHHHHHHHHHHHhcCCCcccEEEEEeccCCCC
Confidence 89999999999999999999999999999999999997
No 26
>PRK06501 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=100.00 E-value=2.6e-40 Score=295.88 Aligned_cols=261 Identities=17% Similarity=0.194 Sum_probs=205.7
Q ss_pred hhhhhhhcCCCcccccCCCCC---CCCCCCCCCCCCcccCCCCHHHHhhcChHHHHHHHHHHHHHHHCCCCCCCCC----
Q psy4744 2 EFNTGVARRNCPIKIKSSHNT---PASKLQTITKFDQTFFSLHSRLANVLDPLVRCFIEPCFEAILDAGINPKSLA---- 74 (270)
Q Consensus 2 ~~w~~l~~g~~~~~~~~~~~~---~~~~~~~~~~fd~~~~~~~~~~~~~~~~~~~l~l~a~~~Al~dAg~~~~~~~---- 74 (270)
+||++|++|++.++.++.+.. +....+.++.|+.. ....+++..++++.++++||+|||++..++.
T Consensus 30 ~~~~~L~~G~s~i~~~~~~~~~~~~~~~~g~~~~~~~~-------~~~~~~~~~~~~~~aa~~Al~dAgl~~~~~~~~~~ 102 (425)
T PRK06501 30 DNWAALTAGESGIHTITRFPTEGLRTRIAGTVDFLPES-------PFGASALSEALARLAAEEALAQAGIGKGDFPGPLF 102 (425)
T ss_pred HHHHHHHcCCCceEcCCcccccCCCCceEEEEeecccc-------cccccCHHHHHHHHHHHHHHHHcCCCcccccccee
Confidence 799999999999987765432 22333334322221 1223567789999999999999999543321
Q ss_pred ----------CCCeEEEEccCCCCccc----cccCccccchhhHhhhhhhhHHHHHHHHcCCCCCCccccccchhHHHHH
Q psy4744 75 ----------GSNSSVYTNSCISDDES----LGCDERLTTNFWLLAHVRCLLANRIAYLFDLKGPSFTIDNSWTGGIEVL 140 (270)
Q Consensus 75 ----------~~~~gv~~g~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl~Gp~~~v~~~cas~~~al 140 (270)
..+++++.+........ +........+.++.....+.++.+|+..||++||+++++++|+|++.||
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~~gl~G~~~~i~~aCaS~~~Al 182 (425)
T PRK06501 103 LAAPPVELEWPARFALAAAVGDNDAPSYDRLLRAARGGRFDALHERFQFGSIADRLADRFGTRGLPISLSTACASGATAI 182 (425)
T ss_pred eccccccCCCCceEEEEEecCCccHHHHHHHHhhcCcccCChhhhhhcccHHHHHHHHHhCCCCCceeecCccHHHHHHH
Confidence 35677777765443221 1111112233445666777899999999999999999999999999999
Q ss_pred HHHHHHHhcCCCCEEEEeeeccccCchhHHhhhcCcccC-----CCCCCcccCCCCCceeecCeeEEEEecChHHHHhhc
Q psy4744 141 RQAVQDISEGRVDTAIVGVSNLLLNANLNSLFQGLNRLS-----PDGKTRSFDHLANGYARSEGIVVLLLQRSETALRSY 215 (270)
Q Consensus 141 ~~A~~~i~~G~~d~~lv~g~~~~~~~~~~~~~~~~~~ls-----~~~~~~pfd~~~~g~~~geGA~alvL~~~~~A~~~~ 215 (270)
..|+++|++|++|++||+|+|..+++..+..|..++.++ ++..|||||.+++|+++|||++++|||+.++|+++
T Consensus 183 ~~A~~~I~~G~~d~vlvgG~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~rpfd~~r~G~v~GEGaaalVLe~~~~A~~r- 261 (425)
T PRK06501 183 QLGVEAIRRGETDRALCIATDGSVSAEALIRFSLLSALSTQNDPPEKASKPFSKDRDGFVMAEGAGALVLESLESAVAR- 261 (425)
T ss_pred HHHHHHHHcCCCCEEEEeeecccCCHHHHHHHHHhhccccCCCCCCcccCCCCCCCCCeeeeccEEEEEECcHHHHHHC-
Confidence 999999999999999999999888999888888888776 45689999999999999999999999999999988
Q ss_pred CceEeEEEeccCCCCCCC----cCCCHHHHHHHHHHHHHHcCCCCCCccEEEcccCCCC
Q psy4744 216 GEVLHAESRFYGSLERPF----VGFNQASLVEFFTNFYQKARVNPGQVDFLEADGSAIK 270 (270)
Q Consensus 216 g~~~~~~~~~~~~~~~~~----~~~~~~~~~~a~~~al~~agi~~~did~v~~hgtgt~ 270 (270)
+..+++.+.+++...+.. ..|+...+.++|+++|+++|++|+|||||++|||||+
T Consensus 262 g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~AL~~agi~p~dId~i~~Hgtgt~ 320 (425)
T PRK06501 262 GAKILGIVAGCGEKADSFHRTRSSPDGSPAIGAIRAALADAGLTPEQIDYINAHGTSTP 320 (425)
T ss_pred CCeEEEEEEEEEEccCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHcCEEEecCccCc
Confidence 888998888877654433 3456778999999999999999999999999999996
No 27
>PRK09185 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed
Probab=100.00 E-value=7.2e-37 Score=271.32 Aligned_cols=258 Identities=16% Similarity=0.145 Sum_probs=195.9
Q ss_pred hhhhhhhcCC-CcccccCCCCCC-CCCCCCCCCCCcccCCCCHHHHhhcChHHHHHHHHHHH---HHHHCCCCCCCCCCC
Q psy4744 2 EFNTGVARRN-CPIKIKSSHNTP-ASKLQTITKFDQTFFSLHSRLANVLDPLVRCFIEPCFE---AILDAGINPKSLAGS 76 (270)
Q Consensus 2 ~~w~~l~~g~-~~~~~~~~~~~~-~~~~~~~~~fd~~~~~~~~~~~~~~~~~~~l~l~a~~~---Al~dAg~~~~~~~~~ 76 (270)
|||++|++|+ ++|+..+.+... ...++.+++|+. . .++.+..+.+++..+++..++.+ |+.+++ .+.+..
T Consensus 21 ~~~~~l~~G~~sgi~~~~~~~~~~~~~~g~~~~~~~-~-~~~~~~~~~~~~~~~~~~~a~~~~~~a~~~~~---~~~~~~ 95 (392)
T PRK09185 21 AILAALRAGRASGMRPCDFWLVDLPTWVGEVVGVEL-P-ALPAALAAFDCRNNRLALLALQQIEPAVEAAI---ARYGAD 95 (392)
T ss_pred HHHHHHHcCCCCCeEeCccccccCCeEEEEecCccc-c-cCCHHHHhcCCHHHHHHHHHHHHHHHHHHhhc---ccCCCC
Confidence 7999999999 999877654321 122344555653 2 26777778888888888777766 555554 344667
Q ss_pred CeEEEEccCCCCcccccc--------CccccchhhHhhhhhhhHHHHHHHHcCCCCCCccccccchhHHHHHHHHHHHHh
Q psy4744 77 NSSVYTNSCISDDESLGC--------DERLTTNFWLLAHVRCLLANRIAYLFDLKGPSFTIDNSWTGGIEVLRQAVQDIS 148 (270)
Q Consensus 77 ~~gv~~g~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~a~~ia~~~gl~Gp~~~v~~~cas~~~al~~A~~~i~ 148 (270)
++||++|++.+.....+. ......++.++....+.++.+++..||++||+++++++|+|++.||..|+++|+
T Consensus 96 r~gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~Gp~~~i~~acas~~~Al~~A~~~I~ 175 (392)
T PRK09185 96 RIGVVLGTSTSGILEGELAYRRRDPAHGALPADYHYAQQELGSLADFLRAYLGLSGPAYTISTACSSSAKVFASARRLLE 175 (392)
T ss_pred cEEEEEeeCCccHHHHHHHHHHHhhccCCCCCchhhhhhcccHHHHHHHHHhCCCCCcccccChhHHHHHHHHHHHHHHH
Confidence 999999998876433221 111224566777888999999999999999999999999999999999999999
Q ss_pred cCCCCEEEEeeeccccCchhHHhhhcCcccCCCCCCcccCCCCCceeecCeeEEEEecChHHHHhhcCceEeEEEeccCC
Q psy4744 149 EGRVDTAIVGVSNLLLNANLNSLFQGLNRLSPDGKTRSFDHLANGYARSEGIVVLLLQRSETALRSYGEVLHAESRFYGS 228 (270)
Q Consensus 149 ~G~~d~~lv~g~~~~~~~~~~~~~~~~~~ls~~~~~~pfd~~~~g~~~geGA~alvL~~~~~A~~~~g~~~~~~~~~~~~ 228 (270)
+|++|.|||+|+|. .++.....|..++.++. ..|+|||.+++|+++|||++++|||+++ .....+.+.....++.
T Consensus 176 ~G~~d~vlvgg~d~-~~~~~~~~~~~~~~l~~-~~~~Pfd~~~~G~~~gEGaa~vVLe~~~---~~~~~I~g~g~~~d~~ 250 (392)
T PRK09185 176 AGLCDAAIVGGVDS-LCRLTLNGFNSLESLSP-QPCRPFSANRDGINIGEAAAFFLLERED---DAAVALLGVGESSDAH 250 (392)
T ss_pred cCCCCEEEEeeccc-cChHHHHHHHhccccCC-CccCCCcCCCCccceeceEEEEEEEEcC---CCcEEEEEEEEeCCCC
Confidence 99999999999997 56666677888888775 5899999999999999999999999872 1111222222222222
Q ss_pred CCCCCcCCCHHHHHHHHHHHHHHcCCCCCCccEEEcccCCCC
Q psy4744 229 LERPFVGFNQASLVEFFTNFYQKARVNPGQVDFLEADGSAIK 270 (270)
Q Consensus 229 ~~~~~~~~~~~~~~~a~~~al~~agi~~~did~v~~hgtgt~ 270 (270)
. .....|+..++.++++++|+++|++|+|||||++|||||+
T Consensus 251 ~-~~~~~~~~~~~~~a~~~Al~~Agl~~~dId~v~~hgtgt~ 291 (392)
T PRK09185 251 H-MSAPHPEGLGAILAMQQALADAGLAPADIGYINLHGTATP 291 (392)
T ss_pred C-CCCCCCCHHHHHHHHHHHHHHcCCCHHHccEEEeCCCCCc
Confidence 1 1124456678899999999999999999999999999996
No 28
>PF00109 ketoacyl-synt: Beta-ketoacyl synthase, N-terminal domain; InterPro: IPR014030 Beta-ketoacyl-ACP synthase 2.3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the N-terminal domain of beta-ketoacyl-ACP synthases. ; PDB: 1J3N_B 3KZU_C 1W0I_A 2IX4_A 1F91_B 2BYZ_D 2AQB_C 2BZ3_C 1H4F_C 2VB9_B ....
Probab=100.00 E-value=2.4e-37 Score=259.80 Aligned_cols=210 Identities=31% Similarity=0.457 Sum_probs=167.5
Q ss_pred hhhhhhhcCCCcccccCC----CCC---CCCCCCC----------CCCCCcccCCCCHHHHhhcChHHHHHHHHHHHHHH
Q psy4744 2 EFNTGVARRNCPIKIKSS----HNT---PASKLQT----------ITKFDQTFFSLHSRLANVLDPLVRCFIEPCFEAIL 64 (270)
Q Consensus 2 ~~w~~l~~g~~~~~~~~~----~~~---~~~~~~~----------~~~fd~~~~~~~~~~~~~~~~~~~l~l~a~~~Al~ 64 (270)
+||++|.+|++.+..++. ..+ +.....+ ...||..++++++++.++|+++++|++.++.+||+
T Consensus 21 ~~w~~L~~g~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~aa~~Al~ 100 (254)
T PF00109_consen 21 EFWEALLSGRSGIRPIPERWDPSDYYDPPSRVAGEIDDKKGGFIDDFDFDAYFFGIPPREARRMDRQSRLALAAAREALE 100 (254)
T ss_dssp HHHHHHHTT---EEESCSSSCHTTSTTSSCSEEECBSSSEESSSTTTCGGGTSTCHHHHHHHTS-HHHHHHHHHHHHHHH
T ss_pred HHHhhhccCceeeeeeccccccccccccCCcccccccccccceeeecccccccccccchhhhhhhhhhhHHHHHhhhhcc
Confidence 799999999999987662 111 1111112 45688888889999999999999999999999999
Q ss_pred HCCCCCCCCCCC-CeEEEEccCCCCccc---c-ccC--ccccchhhHhhhhhhhHHHHHHHHcCCCCCCccccccchhHH
Q psy4744 65 DAGINPKSLAGS-NSSVYTNSCISDDES---L-GCD--ERLTTNFWLLAHVRCLLANRIAYLFDLKGPSFTIDNSWTGGI 137 (270)
Q Consensus 65 dAg~~~~~~~~~-~~gv~~g~~~~~~~~---~-~~~--~~~~~~~~~~~~~~~~~a~~ia~~~gl~Gp~~~v~~~cas~~ 137 (270)
|||++...++.. ++||++|++.+++.. + ... .....|..+...+++.++++|++.||++||+++|+++|+||+
T Consensus 101 dAg~~~~~~~~~~r~gv~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl~G~~~tv~~acaSgl 180 (254)
T PF00109_consen 101 DAGLDPDDLDGERRVGVFVGSSSGDYEFYRALDEDGETPRDVSPWFVPNTLPNSAAGRIAILFGLRGPSYTVSTACASGL 180 (254)
T ss_dssp HHTSTGGGHTGGGTEEEEEEESSSHHHHHHHHHHHTTCGGGSHTTHHHHHSTTHHHHHHHHHHTB-SSEEEEE-GGGHHH
T ss_pred cccccccccccccceeeccccccccccccccccccccccccccccccCcccccccccchhhhcCCCCccccccccccccc
Confidence 999988776666 599999999995422 1 111 344555455556899999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCCEEEEeeeccccCchhHHhhhcCcccCCCCCCcccCCCCCceeecCeeEEEEecChHHH
Q psy4744 138 EVLRQAVQDISEGRVDTAIVGVSNLLLNANLNSLFQGLNRLSPDGKTRSFDHLANGYARSEGIVVLLLQRSETA 211 (270)
Q Consensus 138 ~al~~A~~~i~~G~~d~~lv~g~~~~~~~~~~~~~~~~~~ls~~~~~~pfd~~~~g~~~geGA~alvL~~~~~A 211 (270)
.||..|+++|++|++|+|||+|+|...++..+..|..++.+++++.|+|||.+++|+++||||+++|||++++|
T Consensus 181 ~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~~s~~~~~~pf~~~~~G~v~gEGa~~~vLe~~~~A 254 (254)
T PF00109_consen 181 AALEAAYRAIRSGEADVALVGGVDAPLSPFILAGFSALGALSADGPCRPFDPFADGFVLGEGAGALVLERLEHA 254 (254)
T ss_dssp HHHHHHHHHHHTTSSSEEEEEEEE--SSHHHHHHHHHTTBB-TTSGGGSTBTTB-SB-BB-EEEEEEEEEHHHH
T ss_pred cccchhccccccccccccccccccccccccccccccccccccccccccccCCCCCCEEEECceEEEEEEEhhhC
Confidence 99999999999999999999999988999999999999999988899999999999999999999999999876
No 29
>cd00825 decarbox_cond_enzymes decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction. Members are involved in the synthesis of fatty acids and polyketides, a diverse group of natural products. Both pathways are an iterative series of additions of small carbon units, usually acetate, to a nascent acyl group. There are 2 classes of decarboxylating condensing enzymes, which can be distinguished by sequence similarity, type of active site residues and type of primer units (acetyl CoA or acyl carrier protein (ACP) linked units).
Probab=99.97 E-value=2.8e-30 Score=225.01 Aligned_cols=219 Identities=18% Similarity=0.181 Sum_probs=182.9
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCeEEEEccCCCCccc---cccCccccchhhHhhhhhhhHHHHHHHHcCCCCCCc
Q psy4744 51 LVRCFIEPCFEAILDAGINPKSLAGSNSSVYTNSCISDDES---LGCDERLTTNFWLLAHVRCLLANRIAYLFDLKGPSF 127 (270)
Q Consensus 51 ~~~l~l~a~~~Al~dAg~~~~~~~~~~~gv~~g~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl~Gp~~ 127 (270)
+.+|+++|+++||++||++.........+++++++.+.+.. .........|+.+.+.+.+.++.+++..+|++||++
T Consensus 11 ~~~l~~~aa~~aL~~Ag~~~~~~~~~i~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~g~~~ 90 (332)
T cd00825 11 VSILGFEAAERAIADAGLSREYQKNPIVGVVVGTGGGSPRFQVFGADAMRAVGPYVVTKAMFPGASGQIATPLGIHGPAY 90 (332)
T ss_pred HHHHHHHHHHHHHHHcCCCccccCCCCEEEEEEeCCccHHHHhhhhccccccCcchhhcccchHHHHHHHHHhCCCCCcc
Confidence 67899999999999999985555556679999988776532 222334567788888888899999999999999999
Q ss_pred cccccchhHHHHHHHHHHHHhcCCCCEEEEeeeccccCchhHHhhhcCcccCCCCCCcccCCCCCceeecCeeEEEEecC
Q psy4744 128 TIDNSWTGGIEVLRQAVQDISEGRVDTAIVGVSNLLLNANLNSLFQGLNRLSPDGKTRSFDHLANGYARSEGIVVLLLQR 207 (270)
Q Consensus 128 ~v~~~cas~~~al~~A~~~i~~G~~d~~lv~g~~~~~~~~~~~~~~~~~~ls~~~~~~pfd~~~~g~~~geGA~alvL~~ 207 (270)
+++.+|+|++.||..|.++|++|++|.+||+++|....+.........+...++..++||+..++|+++|||++++||++
T Consensus 91 ~v~~~cas~~~al~~A~~~i~~g~~~~~Lv~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~gdGaaA~vL~~ 170 (332)
T cd00825 91 DVSAACAGSLHALSLAADAVQNGKQDIVLAGGSEELAAPMDCEFDAMGALSTPEKASRTFDAAADGFVFGDGAGALVVEE 170 (332)
T ss_pred ccccHhHHHHHHHHHHHHHHHcCCCCEEEEeccccccCHHHHHHHhhccccCCCCCCCCCCCCCCCEEEEeeEEEEEECc
Confidence 99999999999999999999999999999999998666655544444555677888999999999999999999999999
Q ss_pred hHHHHhhcCceEeEEEeccCCCCCCC----cCCCHHHHHHHHHHHHHHcCCCCCCccEEEcccCCCC
Q psy4744 208 SETALRSYGEVLHAESRFYGSLERPF----VGFNQASLVEFFTNFYQKARVNPGQVDFLEADGSAIK 270 (270)
Q Consensus 208 ~~~A~~~~g~~~~~~~~~~~~~~~~~----~~~~~~~~~~a~~~al~~agi~~~did~v~~hgtgt~ 270 (270)
++.|+++ +..+++.+.+.+...++. ..+....+.++++++|+++|++++|||++++|++|++
T Consensus 171 ~~~a~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~agl~~~did~~~~h~~~~~ 236 (332)
T cd00825 171 LEHALAR-GAHIYAEIVGTAATIDGAGMGAFAPSAEGLARAAKEALAVAGLTVWDIDYLVAHGTGTP 236 (332)
T ss_pred HHHHHHC-CCeEEEEEEEEEEccCCCCCCCCCcCHHHHHHHHHHHHHHcCCCHhHCCEEEccCCCCC
Confidence 9999877 777777777765433322 2456688899999999999999999999999999975
No 30
>PRK06147 3-oxoacyl-(acyl carrier protein) synthase; Validated
Probab=99.96 E-value=3.2e-27 Score=206.18 Aligned_cols=196 Identities=18% Similarity=0.136 Sum_probs=149.4
Q ss_pred cChHHHHHHHHHHHHHHHCC-CCCCCCCCCCeEEEEccCCCCccccccCccccchhhHhhhhhhhHHHHHHHHcCC--CC
Q psy4744 48 LDPLVRCFIEPCFEAILDAG-INPKSLAGSNSSVYTNSCISDDESLGCDERLTTNFWLLAHVRCLLANRIAYLFDL--KG 124 (270)
Q Consensus 48 ~~~~~~l~l~a~~~Al~dAg-~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl--~G 124 (270)
..+..+|+..|+++||++++ +++ ..+.++++....... ..+..+ ....+..++..+|+ ++
T Consensus 62 ~~r~~~La~~Al~~aL~~a~~~~~-----~~i~lil~~~~~~~~--------~~~~~~----~~~~~~~~~~~lG~~~~~ 124 (348)
T PRK06147 62 PERLAEMAAPAIAEALEGLPALDA-----SEAPLLLCVAEEERP--------GRPPDL----EERLLRELEARLGLRLEP 124 (348)
T ss_pred hHHHHHHHHHHHHHHHHhcccccc-----cCCcEEEEeCchhcC--------CCCcch----HHHHHHHHHHHhCCCCCC
Confidence 34677899999999999998 343 335566664332100 001111 12235567778887 57
Q ss_pred CCccccccchhHHHHHHHHHHHHhcCCCCEEEEeeeccccCchhHHhhhcCcccCCCCCCcccCCCCCceeecCeeEEEE
Q psy4744 125 PSFTIDNSWTGGIEVLRQAVQDISEGRVDTAIVGVSNLLLNANLNSLFQGLNRLSPDGKTRSFDHLANGYARSEGIVVLL 204 (270)
Q Consensus 125 p~~~v~~~cas~~~al~~A~~~i~~G~~d~~lv~g~~~~~~~~~~~~~~~~~~ls~~~~~~pfd~~~~g~~~geGA~alv 204 (270)
|+++|+++|+|++.||..|+++|++|++|.+||+|+|.+..+..+..|...+.+.. +.+++|+++||||+++|
T Consensus 125 ~~~~i~~~casg~~Al~~A~~~i~~G~~~~~lvgg~d~~~~~~~~~~~~~~~~l~~-------~~~~~G~v~GEGA~a~v 197 (348)
T PRK06147 125 GSAVIARGRVSGAVALAQARRLIAAGGCPRVLVAGVDSLLTGPTLAHYEARDRLLT-------SQNSNGFIPGEAAAAVL 197 (348)
T ss_pred CcccccccchHHHHHHHHHHHHHHcCCCCEEEEEeeccccCHHHHHHHHHhhccCC-------CCCCCceeeeceEEEEE
Confidence 88999999999999999999999999999999999999888777777766554432 13789999999999999
Q ss_pred ecChHHHHhhcCceEeEEEeccCCCCCCC--c--CC-CHHHHHHHHHHHHHHcCCCCCCccEEEcccCCCC
Q psy4744 205 LQRSETALRSYGEVLHAESRFYGSLERPF--V--GF-NQASLVEFFTNFYQKARVNPGQVDFLEADGSAIK 270 (270)
Q Consensus 205 L~~~~~A~~~~g~~~~~~~~~~~~~~~~~--~--~~-~~~~~~~a~~~al~~agi~~~did~v~~hgtgt~ 270 (270)
||+.++|+++ +..+++ .+.+...+.. . .| +..++.++|+++|+++|++|+|||||++|+|||+
T Consensus 198 Le~~~~A~~r-ga~i~a--~g~~~~~~~~~~~~~~p~~g~gl~~ai~~AL~~agl~~~dId~v~ah~~gt~ 265 (348)
T PRK06147 198 LGRPAGGEAP-GLPLLG--LGLGREPAPVGESEDLPLRGDGLTQAIRAALAEAGCGLEDMDYRIADLNGEQ 265 (348)
T ss_pred EccHhhhhcC-CCceEE--EEEeecCCCcccCCCCCCChHHHHHHHHHHHHHcCCCHHHCCEEEcCCCCCc
Confidence 9999999888 777776 3344333332 1 23 5788999999999999999999999999999985
No 31
>cd00327 cond_enzymes Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction. Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products.
Probab=99.92 E-value=1e-23 Score=176.88 Aligned_cols=166 Identities=22% Similarity=0.339 Sum_probs=141.6
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCeEEEEccCCCCccccccCccccchhhHhhhhhhhHHHHHHHHcCC-CCCCccc
Q psy4744 51 LVRCFIEPCFEAILDAGINPKSLAGSNSSVYTNSCISDDESLGCDERLTTNFWLLAHVRCLLANRIAYLFDL-KGPSFTI 129 (270)
Q Consensus 51 ~~~l~l~a~~~Al~dAg~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl-~Gp~~~v 129 (270)
..+|+.+|+++||+++|+++++++ +++++++.+++. .+..+.+++..+|+ ++|++++
T Consensus 7 ~~~l~~~A~~~al~~ag~~~~~i~----~li~~~~~~~~~------------------~~~~a~~i~~~lg~~~~~~~~i 64 (254)
T cd00327 7 ASELGFEAAEQAIADAGLSKGPIV----GVIVGTTGGSGE------------------FSGAAGQLAYHLGISGGPAYSV 64 (254)
T ss_pred HHHHHHHHHHHHHHHcCCCCCCce----EEEEEECCCCcc------------------ccHHHHHHHHHhCCCCCCccee
Confidence 678999999999999999877766 899998766542 34667889999999 8999999
Q ss_pred cccchhHHHHHHHHHHHHhcCCCCEEEEeeeccccCchhHHhhhcCcccCCCCCCcccCCCCCceeecCeeEEEEecChH
Q psy4744 130 DNSWTGGIEVLRQAVQDISEGRVDTAIVGVSNLLLNANLNSLFQGLNRLSPDGKTRSFDHLANGYARSEGIVVLLLQRSE 209 (270)
Q Consensus 130 ~~~cas~~~al~~A~~~i~~G~~d~~lv~g~~~~~~~~~~~~~~~~~~ls~~~~~~pfd~~~~g~~~geGA~alvL~~~~ 209 (270)
+++|+|++.||..|.++|++|++|.+||+++|. +++||||+++||++++
T Consensus 65 ~~~C~s~~~al~~A~~~i~~g~~~~~lv~~~e~-------------------------------~~~gdGAaa~vL~~~~ 113 (254)
T cd00327 65 NQACATGLTALALAVQQVQNGKADIVLAGGSEE-------------------------------FVFGDGAAAAVVESEE 113 (254)
T ss_pred ccHhHHHHHHHHHHHHHHHCCCCCEEEEEecce-------------------------------eeecceEEEEEECcHH
Confidence 999999999999999999999999999999998 5799999999999999
Q ss_pred HHHhhcCceEeEEEeccCCCCCCC---cCCCHHHHHHHHHHHHHHcCCCCCCccEEEcccCCCC
Q psy4744 210 TALRSYGEVLHAESRFYGSLERPF---VGFNQASLVEFFTNFYQKARVNPGQVDFLEADGSAIK 270 (270)
Q Consensus 210 ~A~~~~g~~~~~~~~~~~~~~~~~---~~~~~~~~~~a~~~al~~agi~~~did~v~~hgtgt~ 270 (270)
.+.++ +..++..+.+.....++. ..+....+.++++++|+++|++++|||++++|.++++
T Consensus 114 ~a~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ag~~~~did~~~~h~~~~~ 176 (254)
T cd00327 114 HALRR-GAHPQAEIVSTAATFDGASMVPAVSGEGLARAARKALEGAGLTPSDIDYVEAHGTGTP 176 (254)
T ss_pred HHHHC-CCceEEEEEEEEEcCCCCCCCCCCChHHHHHHHHHHHHHcCCCHHHCCEEEccCCcCc
Confidence 88776 666666666655432222 2356788999999999999999999999999999874
No 32
>PRK06064 acetyl-CoA acetyltransferase; Provisional
Probab=99.87 E-value=1.7e-21 Score=173.13 Aligned_cols=199 Identities=18% Similarity=0.214 Sum_probs=138.8
Q ss_pred hHHHHHHHHHHHHHHHCCCCCCCCCCCCeEEEEccCCCCccccccCccccchhhHhhhhhhhHHHHHHHHcCCC-CCCcc
Q psy4744 50 PLVRCFIEPCFEAILDAGINPKSLAGSNSSVYTNSCISDDESLGCDERLTTNFWLLAHVRCLLANRIAYLFDLK-GPSFT 128 (270)
Q Consensus 50 ~~~~l~l~a~~~Al~dAg~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl~-Gp~~~ 128 (270)
+...|+.+++++||+|+|+++++++ ++++|+..++.... ...++..++..+|++ .|.++
T Consensus 21 ~~~eLa~~a~~~Al~dagl~~~~Id----~vi~g~~~~~~~~~----------------~~~~a~~va~~lGl~~~~~~~ 80 (389)
T PRK06064 21 SLRDLAVEAGLEALEDAGIDGKDID----AMYVGNMSAGLFVS----------------QEHIAALIADYAGLAPIPATR 80 (389)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCC----EEEEEecccccccc----------------cccHHHHHHHHcCCCCCCeeE
Confidence 4578999999999999999988887 67777654332110 012456788999997 69999
Q ss_pred ccccchhHHHHHHHHHHHHhcCCCCEEEEeeeccccCchh--HH-h--------hh-cCcc-------c-----------
Q psy4744 129 IDNSWTGGIEVLRQAVQDISEGRVDTAIVGVSNLLLNANL--NS-L--------FQ-GLNR-------L----------- 178 (270)
Q Consensus 129 v~~~cas~~~al~~A~~~i~~G~~d~~lv~g~~~~~~~~~--~~-~--------~~-~~~~-------l----------- 178 (270)
|+++|+|++.+|..|+++|++|++|++||+|.|.+..... .. . +. ..+. +
T Consensus 81 v~~aCasg~~ai~~A~~~I~sG~~~~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~al~a~~~~~~yG~ 160 (389)
T PRK06064 81 VEAACASGGAALRQAYLAVASGEADVVLAAGVEKMTDVPTPDATEAIARAGDYEWEEFFGATFPGLYALIARRYMHKYGT 160 (389)
T ss_pred EeCCcHHHHHHHHHHHHHHHCCCCCEEEEEEEEecccCcchhhhhhhhcccccccccccCCchHHHHHHHHHHHHHHHCC
Confidence 9999999999999999999999999999999986432110 00 0 00 0000 0
Q ss_pred C------------CCCCCcccCC---------------------CCCceeecCeeEEEEecChHHHHhhcCceEeEEEec
Q psy4744 179 S------------PDGKTRSFDH---------------------LANGYARSEGIVVLLLQRSETALRSYGEVLHAESRF 225 (270)
Q Consensus 179 s------------~~~~~~pfd~---------------------~~~g~~~geGA~alvL~~~~~A~~~~g~~~~~~~~~ 225 (270)
+ .....+|... .-+...++|||+++||++++.|+++ +.. ...+.+
T Consensus 161 s~e~~a~~a~~~~~~A~~np~a~~~~~~t~~~~~~s~~i~~Pl~~~d~~~~~dGAaa~vL~s~~~A~~~-~~~-~v~I~g 238 (389)
T PRK06064 161 TEEDLALVAVKNHYNGSKNPYAQFQKEITVEQVLNSPPVADPLKLLDCSPITDGAAAVILASEEKAKEY-TDT-PVWIKA 238 (389)
T ss_pred CHHHHHHHHHHHHHHHhhCcHhhhCCCCCHHHHhcCCcccCCCchhhcCCCCCcceEEEEecHHHHHHh-cCC-CeEEEE
Confidence 0 0000111110 1244468999999999999999876 432 346777
Q ss_pred cCCCCCCC---c---CCCHHHHHHHHHHHHHHcCCCCCCccEEEcccCCCC
Q psy4744 226 YGSLERPF---V---GFNQASLVEFFTNFYQKARVNPGQVDFLEADGSAIK 270 (270)
Q Consensus 226 ~~~~~~~~---~---~~~~~~~~~a~~~al~~agi~~~did~v~~hgtgt~ 270 (270)
++...+.. . .+...+...+++++|+++||+|+|||++|+|.+.|.
T Consensus 239 ~g~~~~~~~~~~~~~~~~~~~~~~a~~~al~~aGi~~~did~~e~~d~ft~ 289 (389)
T PRK06064 239 SGQASDTIALHDRKDFTTLDAAVVAAEKAYKMAGIEPKDIDVAEVHDCFTI 289 (389)
T ss_pred EEEecCcccccccccccccHHHHHHHHHHHHHcCCCHHHCCEEEecCCCcH
Confidence 66543222 1 123456789999999999999999999999999873
No 33
>PRK05656 acetyl-CoA acetyltransferase; Provisional
Probab=99.84 E-value=3.9e-20 Score=164.09 Aligned_cols=193 Identities=18% Similarity=0.163 Sum_probs=139.3
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCeEEEEccCCCCccccccCccccchhhHhhhhhhhHHHHHHHHcCCC--CCCcc
Q psy4744 51 LVRCFIEPCFEAILDAGINPKSLAGSNSSVYTNSCISDDESLGCDERLTTNFWLLAHVRCLLANRIAYLFDLK--GPSFT 128 (270)
Q Consensus 51 ~~~l~l~a~~~Al~dAg~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl~--Gp~~~ 128 (270)
...|+.+|+++||+|+|+++++|| .|++|+...... ...++..++..+|+. -|+++
T Consensus 26 ~~~La~~A~~~AL~~agl~~~dID----~vi~g~~~~~~~------------------~~~~a~~va~~lGl~~~~p~~~ 83 (393)
T PRK05656 26 AVELGAAVIRRLLEQTGLDPAQVD----EVILGQVLTAGA------------------GQNPARQAAIKAGLPHSVPAMT 83 (393)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC----EEEEEEecCCCC------------------CCcHHHHHHHHcCCCCCcceEE
Confidence 467999999999999999999988 677776542210 012445688899996 48999
Q ss_pred ccccchhHHHHHHHHHHHHhcCCCCEEEEeeeccccCchh----------------HHh------hhc-Cccc-------
Q psy4744 129 IDNSWTGGIEVLRQAVQDISEGRVDTAIVGVSNLLLNANL----------------NSL------FQG-LNRL------- 178 (270)
Q Consensus 129 v~~~cas~~~al~~A~~~i~~G~~d~~lv~g~~~~~~~~~----------------~~~------~~~-~~~l------- 178 (270)
|+++|+|++.+|..|+++|++|++|++||+|+|.+..... ... +.. .+..
T Consensus 84 V~~~Casg~~ai~~A~~~I~sG~~d~vLv~G~E~ms~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~a~~ 163 (393)
T PRK05656 84 LNKVCGSGLKALHLAAQAIRCGDAEVIIAGGQENMSLAPYVLPGARTGLRMGHAQLVDSMITDGLWDAFNDYHMGITAEN 163 (393)
T ss_pred ecccchhHHHHHHHHHHHHHcCCCCEEEEEEEhhhccCccccccccccccccchhhhhhhccccccccccCCCHHHHHHH
Confidence 9999999999999999999999999999999997553110 000 000 0110
Q ss_pred -------C-------------------CCCCC-c---ccCCC--------------------------------CCcee-
Q psy4744 179 -------S-------------------PDGKT-R---SFDHL--------------------------------ANGYA- 195 (270)
Q Consensus 179 -------s-------------------~~~~~-~---pfd~~--------------------------------~~g~~- 195 (270)
+ +.+.- . |+..+ .+|.+
T Consensus 164 ~~~~~gitre~~d~~Av~sh~~a~~a~~~a~~~~ei~pv~~~~~~~~~~~~~~D~~~r~~~~~e~l~~l~p~~~~~g~lt 243 (393)
T PRK05656 164 LVEKYGISREAQDAFAAASQQKAVAAIEAGRFDDEITPILIPQRKGEPLAFATDEQPRAGTTAESLAKLKPAFKKDGSVT 243 (393)
T ss_pred HHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceeeeEEeccCCCCceEeccCCCCCCCCCHHHHhcCCCCcCCCCCEE
Confidence 0 11110 0 11000 12334
Q ss_pred ------ecCeeEEEEecChHHHHhhcCceEeEEEeccCCCCCCCcCCCHHHHHHHHHHHHHHcCCCCCCccEEEcccC
Q psy4744 196 ------RSEGIVVLLLQRSETALRSYGEVLHAESRFYGSLERPFVGFNQASLVEFFTNFYQKARVNPGQVDFLEADGS 267 (270)
Q Consensus 196 ------~geGA~alvL~~~~~A~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~agi~~~did~v~~hgt 267 (270)
++|||+++||++++.|+++ +..+++++.+++.... ...+...+..++++++|+++|++|+|||++|+|.+
T Consensus 244 ~~~~s~~~DGAaa~vl~s~~~A~~~-g~~~~a~i~g~~~~~~-~~~~~~~~~~~a~~~al~~agl~~~dId~~e~~d~ 319 (393)
T PRK05656 244 AGNASSLNDGAAAVLLMSAAKAKAL-GLPVLAKIAAYANAGV-DPAIMGIGPVSATRRCLDKAGWSLAELDLIEANEA 319 (393)
T ss_pred ccccCCCCCceEEEEEecHHHHHHC-CCCeeEEEEEEEEecC-CCcccchhHHHHHHHHHHHcCCCHHHCCEEEecCc
Confidence 8999999999999999988 8888888888876432 12223346789999999999999999999999975
No 34
>cd00751 thiolase Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=99.84 E-value=3.9e-20 Score=164.16 Aligned_cols=195 Identities=18% Similarity=0.158 Sum_probs=139.7
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCeEEEEccCCCCccccccCccccchhhHhhhhhhhHHHHHHHHcCCCC--CCcc
Q psy4744 51 LVRCFIEPCFEAILDAGINPKSLAGSNSSVYTNSCISDDESLGCDERLTTNFWLLAHVRCLLANRIAYLFDLKG--PSFT 128 (270)
Q Consensus 51 ~~~l~l~a~~~Al~dAg~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl~G--p~~~ 128 (270)
...|+.+|+++||+|+|+++++|| ++++++..+++. ....+..+...+|++. |+++
T Consensus 22 ~~~La~~A~~~AL~dAgl~~~dID----~vi~~~~~~~~~------------------~~~~a~~v~~~lGl~~~~~~~~ 79 (386)
T cd00751 22 ADDLGAAVIKALLERAGLDPEEVD----DVIMGNVLQAGE------------------GQNPARQAALLAGLPESVPATT 79 (386)
T ss_pred HHHHHHHHHHHHHHhcCCCHHHCC----EEEEEeccCCCC------------------CChHHHHHHHHcCCCCCCchhh
Confidence 478999999999999999998888 677776544331 0123456888899974 8999
Q ss_pred ccccchhHHHHHHHHHHHHhcCCCCEEEEeeeccccCchhHH------hh---------hcCcccC--------------
Q psy4744 129 IDNSWTGGIEVLRQAVQDISEGRVDTAIVGVSNLLLNANLNS------LF---------QGLNRLS-------------- 179 (270)
Q Consensus 129 v~~~cas~~~al~~A~~~i~~G~~d~~lv~g~~~~~~~~~~~------~~---------~~~~~ls-------------- 179 (270)
|+++|+|++.+|..|+++|++|++|.|||+|+|.+....... .+ ...+...
T Consensus 80 v~~~c~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~a~~~ 159 (386)
T cd00751 80 VNRVCGSGLQAVALAAQSIAAGEADVVVAGGVESMSRAPYLLPKARRGGRLGLNTLDGMLDDGLTDPFTGLSMGITAENV 159 (386)
T ss_pred hccccHHHHHHHHHHHHHHHCCCCCeEEEeeeeccccCcccccccccccccCccccccccccccccccCCCCHHHHHHHH
Confidence 999999999999999999999999999999988643211000 00 0001000
Q ss_pred -------------------------C-------------------------CCCCcc-------------cC-----CCC
Q psy4744 180 -------------------------P-------------------------DGKTRS-------------FD-----HLA 191 (270)
Q Consensus 180 -------------------------~-------------------------~~~~~p-------------fd-----~~~ 191 (270)
+ +...|+ |+ ..-
T Consensus 160 ~~~yg~tre~la~vav~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~a~~r~~~t~e~v~~s~~i~~p~g~l~~~ 239 (386)
T cd00751 160 AEKYGISREEQDEFALRSHQRAAAAQEAGRFKDEIVPVEVPGRKGPVVVDRDEGPRPDTTLEKLAKLKPAFKKDGTVTAG 239 (386)
T ss_pred HHHcCCCHHHHHHHHHHHHHHHHHHHHcCCCcCeEEEEEeccCCCCeEeCCCCCCCCCCCHHHHhCCCCCcCCCCcEeCC
Confidence 0 000011 11 112
Q ss_pred CceeecCeeEEEEecChHHHHhhcCceEeEEEeccCCCCCCCcCCCHHHHHHHHHHHHHHcCCCCCCccEEEcccCCC
Q psy4744 192 NGYARSEGIVVLLLQRSETALRSYGEVLHAESRFYGSLERPFVGFNQASLVEFFTNFYQKARVNPGQVDFLEADGSAI 269 (270)
Q Consensus 192 ~g~~~geGA~alvL~~~~~A~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~agi~~~did~v~~hgtgt 269 (270)
+...++|||+++||++++.|+++ +..+++.+.+++...+.. .+...+..++++++|+++||+|+|||++|+|.+.|
T Consensus 240 d~~~~~dGaaavvl~s~~~a~~~-~~~~~~~I~g~~~~~~~~-~~~~~~~~~a~~~a~~~Agi~~~did~~e~~d~f~ 315 (386)
T cd00751 240 NASGINDGAAAVLLMSEEKAKEL-GLKPLARIVGYAVAGVDP-AIMGIGPVPAIPKALKRAGLTLDDIDLIEINEAFA 315 (386)
T ss_pred cCCCCCcceEEEEEecHHHHHHC-CCCeeEEEEEEEEccCCC-cccchhHHHHHHHHHHHcCCCHHHcCEEEeechhH
Confidence 33457999999999999999877 777888888887654332 23345668999999999999999999999998643
No 35
>PRK07108 acetyl-CoA acetyltransferase; Provisional
Probab=99.83 E-value=5.1e-20 Score=163.02 Aligned_cols=194 Identities=15% Similarity=0.131 Sum_probs=139.6
Q ss_pred hHHHHHHHHHHHHHHHCCCCCCCCCCCCeEEEEccCCCCccccccCccccchhhHhhhhhhhHHHHHHHHcCCC--CCCc
Q psy4744 50 PLVRCFIEPCFEAILDAGINPKSLAGSNSSVYTNSCISDDESLGCDERLTTNFWLLAHVRCLLANRIAYLFDLK--GPSF 127 (270)
Q Consensus 50 ~~~~l~l~a~~~Al~dAg~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl~--Gp~~ 127 (270)
+...|+.+++++||+|+|+++++|+ .|++|+...+... ...++..++..+|+. .|++
T Consensus 26 ~~~dL~~~A~~~aL~~agi~~~~ID----~vi~G~~~~~~~~-----------------~~~~a~~i~~~lGl~~~~p~~ 84 (392)
T PRK07108 26 HGATLGGHVVQHAVERAKLDPAEVE----DVIMGCANPEGAT-----------------GANIARQIALRAGLPVTVPGM 84 (392)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCC----cEEEEEeeccccc-----------------ccHHHHHHHHHcCCCCCCcee
Confidence 3578999999999999999999988 4777765543310 113677788888985 6999
Q ss_pred cccccchhHHHHHHHHHHHHhcCCCCEEEEeeeccccCchhH----------Hh------hhcCcc----------cC--
Q psy4744 128 TIDNSWTGGIEVLRQAVQDISEGRVDTAIVGVSNLLLNANLN----------SL------FQGLNR----------LS-- 179 (270)
Q Consensus 128 ~v~~~cas~~~al~~A~~~i~~G~~d~~lv~g~~~~~~~~~~----------~~------~~~~~~----------ls-- 179 (270)
+|+++|+||+.||..|+++|++|++|++||+|+|.+...... .. +..++. ++
T Consensus 85 ~V~~aCaSg~~Al~~A~~~I~sG~~d~vlagGvE~ms~~p~~~~~~~~~~~~~~~~~~~~~~~m~~~ae~~a~~~~i~r~ 164 (392)
T PRK07108 85 TVNRFCSSGLQTIALAAQRVIAGEGDVFVAGGVESISCVQNEMNRHMLREGWLVEHKPEIYWSMLQTAENVAKRYGISKE 164 (392)
T ss_pred eecchhhHHHHHHHHHHHHHHCCCCCEEEEEEEeccCCCCCcCCCcCccchhhhccCCccccCHHHHHHHHHHHhCCCHH
Confidence 999999999999999999999999999999999986542110 00 000000 00
Q ss_pred -----------------C--------------CCCCcccC-----------CC--------------------------C
Q psy4744 180 -----------------P--------------DGKTRSFD-----------HL--------------------------A 191 (270)
Q Consensus 180 -----------------~--------------~~~~~pfd-----------~~--------------------------~ 191 (270)
. ++..+|+. ++ .
T Consensus 165 ~~d~~a~~s~~~A~~A~k~g~~~~ei~pv~~~~~~~n~~a~~~~~~~~~~~~de~~r~~~t~e~l~~l~~~~~~g~lt~~ 244 (392)
T PRK07108 165 RQDEYGVQSQQRAAAAQAAGRFDDEIVPITVTAGVADKATGRLFTKEVTVSADEGIRPDTTLEGVSKIRSALPGGVITAG 244 (392)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCcCceeeEEecccccccccCcccccceeEccCCCCCCCCCHHHHhcCCCCCCCCCCcCC
Confidence 0 10011211 11 1
Q ss_pred CceeecCeeEEEEecChHHHHhhcCceEeEEEeccCCCCCCCcCCCHHHHHHHHHHHHHHcCCCCCCccEEEccc
Q psy4744 192 NGYARSEGIVVLLLQRSETALRSYGEVLHAESRFYGSLERPFVGFNQASLVEFFTNFYQKARVNPGQVDFLEADG 266 (270)
Q Consensus 192 ~g~~~geGA~alvL~~~~~A~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~agi~~~did~v~~hg 266 (270)
+...++|||+++||++++.|+++ +..+.+++.+++..... ..+...+...+++++|+++|++|+|||++|.|-
T Consensus 245 n~~~~~DGAaa~vl~s~~~A~~~-g~~~~~~i~g~~~~~~~-~~~~~~~~~~a~~~al~~agl~~~Did~~ei~e 317 (392)
T PRK07108 245 NASQFSDGASACVVMNAKVAERE-GLQPLGIFRGFAVAGCE-PDEMGIGPVFAVPKLLKQAGLKVDDIDLWELNE 317 (392)
T ss_pred cCCCCCCceEEEEEecHHHHHHC-CCCceEEEEEEEEeccC-CcccchhHHHHHHHHHHHcCCCHHHcCchHhhh
Confidence 22247999999999999999887 77777888887764322 222334668999999999999999999999883
No 36
>PRK12578 acetyl-CoA acetyltransferase; Provisional
Probab=99.83 E-value=8.3e-20 Score=162.00 Aligned_cols=195 Identities=15% Similarity=0.099 Sum_probs=135.8
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCeEEEEccCCCCccccccCccccchhhHhhhhhhhHHHHHHHHcCCCC-CCccc
Q psy4744 51 LVRCFIEPCFEAILDAGINPKSLAGSNSSVYTNSCISDDESLGCDERLTTNFWLLAHVRCLLANRIAYLFDLKG-PSFTI 129 (270)
Q Consensus 51 ~~~l~l~a~~~Al~dAg~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl~G-p~~~v 129 (270)
...|+.+|+++||+|||+++++|+ ++++|+...... ...++..++..+|+++ |.++|
T Consensus 21 ~~eLa~~A~~~AL~dAgi~~~dID----~vi~g~~~~~~~------------------~~~~a~~v~~~lGl~~~~~~~v 78 (385)
T PRK12578 21 VQELAWESIKEALNDAGVSQTDIE----LVVVGSTAYRGI------------------ELYPAPIVAEYSGLTGKVPLRV 78 (385)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC----EEEEEecccccc------------------cCChHHHHHHHhCCCCCCeeEE
Confidence 468999999999999999999888 677776432110 0113456888999965 66899
Q ss_pred cccchhHHHHHHHHHHHHhcCCCCEEEEeeeccccCchhH---H--------hhh--cCcccC-----------------
Q psy4744 130 DNSWTGGIEVLRQAVQDISEGRVDTAIVGVSNLLLNANLN---S--------LFQ--GLNRLS----------------- 179 (270)
Q Consensus 130 ~~~cas~~~al~~A~~~i~~G~~d~~lv~g~~~~~~~~~~---~--------~~~--~~~~ls----------------- 179 (270)
+++|+|++.||..|++.|++|++|.+||+|+|.+...... . .+. ..+...
T Consensus 79 ~~~casg~~al~~A~~~I~sG~~~~vLvvg~e~~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~a~~a~~~m~~~g~ 158 (385)
T PRK12578 79 EAMCATGLAASLTAYTAVASGLVDMAIAVGVDKMTEVDTSTSLAIGGRGGNYQWEYHFYGTTFPTYYALYATRHMAVYGT 158 (385)
T ss_pred eccCHHHHHHHHHHHHHHHCCCCCEEEEEEEeecccCcccchhhhcccccccccccccCCCChHHHHHHHHHHHHHHhCc
Confidence 9999999999999999999999999999999975432110 0 000 111100
Q ss_pred -------------------CCC----------------CCcccCCCCCceeecCeeEEEEecChHHHHhhcCceEeEEEe
Q psy4744 180 -------------------PDG----------------KTRSFDHLANGYARSEGIVVLLLQRSETALRSYGEVLHAESR 224 (270)
Q Consensus 180 -------------------~~~----------------~~~pfd~~~~g~~~geGA~alvL~~~~~A~~~~g~~~~~~~~ 224 (270)
|.. .+.|+ ..-+...++|||+++||++++.|++. +..+.+.+.
T Consensus 159 t~e~~a~va~~~~~~A~~np~a~~~~~i~~e~v~~s~~i~~Pl-~~~d~~~~~DGAaA~vl~s~e~A~~l-~~~~~~~I~ 236 (385)
T PRK12578 159 TEEQMALVSVKAHKYGAMNPKAHFQKPVTVEEVLKSRAISWPI-KLLDSCPISDGSATAIFASEEKVKEL-KIDSPVWIT 236 (385)
T ss_pred CHHHHHHHHHHHHHHHhcCChhhcCCCCCHHHHhcCCccCCCc-cHhhcCCcCCCeEEEEEecHHHHHhc-CCCCCeEEE
Confidence 100 01111 11233457999999999999999875 544556677
Q ss_pred ccCCCCCCC---cCC---CHHHHHHHHHHHHHHcCCCCCCccEEEcccCCC
Q psy4744 225 FYGSLERPF---VGF---NQASLVEFFTNFYQKARVNPGQVDFLEADGSAI 269 (270)
Q Consensus 225 ~~~~~~~~~---~~~---~~~~~~~a~~~al~~agi~~~did~v~~hgtgt 269 (270)
+++...+.. ..| ...+...+++++|++||++|+|||++|+|.+-|
T Consensus 237 g~g~~~~~~~~~~~~~~~~~~~~~~a~~~al~~Agi~~~DiD~~ei~d~ft 287 (385)
T PRK12578 237 GIGYANDYAYVARRGEWVGFKATQLAARQAYNMAKVTPNDIEVATVHDAFT 287 (385)
T ss_pred EEEEecCcccccccccccccHHHHHHHHHHHHHcCCCHHHCCEEEecCcCh
Confidence 666532221 111 123567899999999999999999999998765
No 37
>PRK07515 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=99.83 E-value=1.2e-19 Score=160.48 Aligned_cols=181 Identities=12% Similarity=0.132 Sum_probs=128.2
Q ss_pred hHHHHHHHHHHHHHHHCCCCCCCCCCCCeEEEEccCCCCccccccCccccchhhHhhhhhhhHHHHHHHHcCCCCCCccc
Q psy4744 50 PLVRCFIEPCFEAILDAGINPKSLAGSNSSVYTNSCISDDESLGCDERLTTNFWLLAHVRCLLANRIAYLFDLKGPSFTI 129 (270)
Q Consensus 50 ~~~~l~l~a~~~Al~dAg~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl~Gp~~~v 129 (270)
....|+.+|+++||+++|+++++++ .+++++...++. ....+..++..||++++++++
T Consensus 94 ~~~~la~~Aa~~aL~~agl~~~~Id----~li~~~~~~~~~------------------~p~~a~~v~~~Lgl~~~~~~v 151 (372)
T PRK07515 94 IQAEMGVAAARQALARAGRTAEDID----AVIVACSNMQRA------------------YPAMAIEIQQALGIEGFAFDM 151 (372)
T ss_pred hHHHHHHHHHHHHHHHcCCCHHHCC----EEEEECCCCCCC------------------CcHHHHHHHHhcCCCCcEEEe
Confidence 3467999999999999999988887 577766533221 112356788999999999999
Q ss_pred cccchhHHHHHHHHHHHHhcCCCCEEEEeeeccccCchhHHhhhcCcccCCCCCCcccCCCCCceeecCeeEEEEecChH
Q psy4744 130 DNSWTGGIEVLRQAVQDISEGRVDTAIVGVSNLLLNANLNSLFQGLNRLSPDGKTRSFDHLANGYARSEGIVVLLLQRSE 209 (270)
Q Consensus 130 ~~~cas~~~al~~A~~~i~~G~~d~~lv~g~~~~~~~~~~~~~~~~~~ls~~~~~~pfd~~~~g~~~geGA~alvL~~~~ 209 (270)
+.+|+|++.||..|.++|++|.+|.|||+++|.+.... -|+....++++||||+|+||++.+
T Consensus 152 ~~aCasg~~al~~A~~~i~~g~~~~vLvv~~e~~s~~~------------------~~~d~~~~~lfGDgAaA~vL~~~~ 213 (372)
T PRK07515 152 NVACSSATFGIQTAANAIRSGSARRVLVVNPEICSGHL------------------NFRDRDSHFIFGDVATAVIVERAD 213 (372)
T ss_pred cchhHHHHHHHHHHHHHHHcCCCCEEEEEeeecccccc------------------cccCCCCCEEecCccEEEEEeecc
Confidence 99999999999999999999999999999999732110 012223579999999999999876
Q ss_pred HHHhhcCceEeEEE------------eccCCCCCC--CcCC------CHH--------HHHHHHHHHHHHcCCCCCCccE
Q psy4744 210 TALRSYGEVLHAES------------RFYGSLERP--FVGF------NQA--------SLVEFFTNFYQKARVNPGQVDF 261 (270)
Q Consensus 210 ~A~~~~g~~~~~~~------------~~~~~~~~~--~~~~------~~~--------~~~~a~~~al~~agi~~~did~ 261 (270)
.+..+.+..+.... .++...... ...+ +.. ...++++++|+++|++++||||
T Consensus 214 ~~~~~~~~~il~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~L~~~gl~~~dId~ 293 (372)
T PRK07515 214 TATSAGGFEILGTRLFTQFSNNIRNNFGFLNRADPEGIGARDKLFVQEGRKVFKEVCPMVAEHIVEHLAENGLTPADVKR 293 (372)
T ss_pred ccccCCCceEEEEEeecccccceecCCCCCCCCCccccccccceEEeccHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCE
Confidence 55322121222211 111100000 0011 111 2578999999999999999999
Q ss_pred EEcccCCCC
Q psy4744 262 LEADGSAIK 270 (270)
Q Consensus 262 v~~hgtgt~ 270 (270)
|.+|.++++
T Consensus 294 ~~~Hq~~~~ 302 (372)
T PRK07515 294 FWLHQANIN 302 (372)
T ss_pred EEECCCCHH
Confidence 999998863
No 38
>COG0332 FabH 3-oxoacyl-[acyl-carrier-protein]
Probab=99.83 E-value=1.2e-19 Score=154.28 Aligned_cols=193 Identities=17% Similarity=0.215 Sum_probs=141.0
Q ss_pred CCCCCcccCCCCHHHHhh-cChHHHHHHHHHHHHHHHCCCCCCCCCCCCeEEEEccCCCCccccccCccccchhhHhhhh
Q psy4744 30 ITKFDQTFFSLHSRLANV-LDPLVRCFIEPCFEAILDAGINPKSLAGSNSSVYTNSCISDDESLGCDERLTTNFWLLAHV 108 (270)
Q Consensus 30 ~~~fd~~~~~~~~~~~~~-~~~~~~l~l~a~~~Al~dAg~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (270)
-++|-....++..+.... -.....|+.+|+++||++||+++++|| -+++.+..+++.
T Consensus 30 sdewI~~rtGir~R~~a~~~e~~s~la~~Aa~~AL~~Agi~~~dID----lII~aT~tpd~~------------------ 87 (323)
T COG0332 30 SDEWIETRTGIRERRIAADDETTSDLAVEAARKALEDAGISPDDID----LIIVATSTPDHL------------------ 87 (323)
T ss_pred CcceeeeecCCceeeecCCCccHHHHHHHHHHHHHHHcCCCHHHCC----EEEEEcCCcccC------------------
Confidence 344444444555554444 345779999999999999999999998 688888776653
Q ss_pred hhhHHHHHHHHcCCCC-CCccccccchhHHHHHHHHHHHHhcCCCCEEEEeeeccccCchhHHhhhcCcccCCCCCCccc
Q psy4744 109 RCLLANRIAYLFDLKG-PSFTIDNSWTGGIEVLRQAVQDISEGRVDTAIVGVSNLLLNANLNSLFQGLNRLSPDGKTRSF 187 (270)
Q Consensus 109 ~~~~a~~ia~~~gl~G-p~~~v~~~cas~~~al~~A~~~i~~G~~d~~lv~g~~~~~~~~~~~~~~~~~~ls~~~~~~pf 187 (270)
.+.++..+...||+++ +++.++.+|++.++||..|..+|++|.++.+||+|.|...... -|
T Consensus 88 ~Ps~A~~vq~~LG~~~~~afDl~aaCsgf~yaL~~A~~~i~sG~~k~vLVVg~e~~S~~l------------------d~ 149 (323)
T COG0332 88 FPSTACLVQARLGLGGAPAFDLQAACSGFLYALSVADGLIRSGGYKNVLVVGAETLSRIL------------------DW 149 (323)
T ss_pred CChHHHHHHHHhCCCCcceeechhhhHHHHHHHHHHHHHHHcCCCCEEEEEehhHhhccC------------------CH
Confidence 3467888999999987 8999999999999999999999999999999999999832211 11
Q ss_pred CCCCCceeecCeeEEEEecChHHHHhhcCceEeEEEeccCCCCCCC------------------cCCC--------HHHH
Q psy4744 188 DHLANGYARSEGIVVLLLQRSETALRSYGEVLHAESRFYGSLERPF------------------VGFN--------QASL 241 (270)
Q Consensus 188 d~~~~g~~~geGA~alvL~~~~~A~~~~g~~~~~~~~~~~~~~~~~------------------~~~~--------~~~~ 241 (270)
..+...+++||||+|+||++.+. +. + ++...+..++...... ...+ ...+
T Consensus 150 ~dR~t~vlFgDGAgAvvl~~~~~--~~-~-i~~~~l~sdg~~~~~l~~~~~~~~~~~~~~~~~~~~m~Gr~vfk~av~~~ 225 (323)
T COG0332 150 TDRDTCVLFGDGAGAVVLEATED--DN-G-ILDTDLGSDGSQGDLLYLPGGGSATPKEESGGGLLVMDGREVFKFAVRAM 225 (323)
T ss_pred hhccceEEEcCCceEEEEecCCC--Cc-C-eeeeeeeccccCCCeeeccCCCCccccccccccceeeccHHHHHHHHHHH
Confidence 22347789999999999998761 11 1 2223333333221000 0001 1335
Q ss_pred HHHHHHHHHHcCCCCCCccEEEccc
Q psy4744 242 VEFFTNFYQKARVNPGQVDFLEADG 266 (270)
Q Consensus 242 ~~a~~~al~~agi~~~did~v~~hg 266 (270)
.++++++|++++++++|||++.+|=
T Consensus 226 ~~~~~~~L~~~~l~~~dId~~vpHQ 250 (323)
T COG0332 226 PKAIEEVLEKAGLTPEDIDWFVPHQ 250 (323)
T ss_pred HHHHHHHHHHcCCCHHHCCEEcccc
Confidence 7899999999999999999999993
No 39
>PRK06633 acetyl-CoA acetyltransferase; Provisional
Probab=99.82 E-value=1.6e-19 Score=159.34 Aligned_cols=192 Identities=15% Similarity=0.130 Sum_probs=135.8
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCeEEEEccCCCCccccccCccccchhhHhhhhhhhHHHHHHHHcCCC--CCCcc
Q psy4744 51 LVRCFIEPCFEAILDAGINPKSLAGSNSSVYTNSCISDDESLGCDERLTTNFWLLAHVRCLLANRIAYLFDLK--GPSFT 128 (270)
Q Consensus 51 ~~~l~l~a~~~Al~dAg~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl~--Gp~~~ 128 (270)
...|+.++++++|+|+|+++++|+ .||+|+...... ....+..++...|+. =|+++
T Consensus 27 ~~~L~~~a~~~al~~agi~~~~Id----~vv~G~~~~~~~------------------g~~~~r~~~~~~Gl~~~~p~~~ 84 (392)
T PRK06633 27 APMLAAHLIKDILQNSKIDPALVN----EVILGQVITGGS------------------GQNPARQTLIHAGIPKEVPGYT 84 (392)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHcC----EEEEEecCcccc------------------ccHHHHHHHHHCCCCCCccchh
Confidence 345889999999999999999888 577775542221 112445567788985 39999
Q ss_pred ccccchhHHHHHHHHHHHHhcCCCCEEEEeeeccccC-chh-H-------------H--hhhcC-cccC-----------
Q psy4744 129 IDNSWTGGIEVLRQAVQDISEGRVDTAIVGVSNLLLN-ANL-N-------------S--LFQGL-NRLS----------- 179 (270)
Q Consensus 129 v~~~cas~~~al~~A~~~i~~G~~d~~lv~g~~~~~~-~~~-~-------------~--~~~~~-~~ls----------- 179 (270)
|+++|+||+.|+..|++.|++|++|++||+|+|.+.. |.. . . .+... ..+.
T Consensus 85 V~~~CaSG~~Ai~~A~~~I~sG~~dvvla~G~E~ms~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~a~~~ 164 (392)
T PRK06633 85 INKVCGSGLKSVALAANSIMTGDNEIVIAGGQENMSLGMHGSYIRAGAKFGDIKMVDLMQYDGLTDVFSGVFMGITAENI 164 (392)
T ss_pred hcchhHHHHHHHHHHHHHHHcCCCCEEEEcccccCCCCCcchhcccccccCcchhhhhhcccccccccCcchHHHHHHHH
Confidence 9999999999999999999999999999999998653 210 0 0 00000 0000
Q ss_pred -------------------------CCCC-C----cccC-----------------------C--------CCCc-----
Q psy4744 180 -------------------------PDGK-T----RSFD-----------------------H--------LANG----- 193 (270)
Q Consensus 180 -------------------------~~~~-~----~pfd-----------------------~--------~~~g----- 193 (270)
+... . -|.+ . +..|
T Consensus 165 ~~~~gitre~~d~~Avksh~~a~~np~A~~~~~ei~p~~v~~~~~~~~~~~d~~~rp~~~~e~l~~l~p~~~~~g~lt~~ 244 (392)
T PRK06633 165 SKQFNISRQEQDEFALSSHKKAAKAQLAGIFKDEILPIEVTIKKTTSLFDHDETVRPDTSLEILSKLRPAFDKNGVVTAG 244 (392)
T ss_pred HHHhCCCHHHHHHHHHHHHHHHHHhHHcCCCcCceeeEEeccCCCceeeccCCCCCCCCCHHHHccCCCccCCCCCEech
Confidence 0000 0 0111 0 0012
Q ss_pred --eeecCeeEEEEecChHHHHhhcCceEeEEEeccCCCCCCCcCCCHHHHHHHHHHHHHHcCCCCCCccEEEccc
Q psy4744 194 --YARSEGIVVLLLQRSETALRSYGEVLHAESRFYGSLERPFVGFNQASLVEFFTNFYQKARVNPGQVDFLEADG 266 (270)
Q Consensus 194 --~~~geGA~alvL~~~~~A~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~agi~~~did~v~~hg 266 (270)
..++|||+++||++++.|+++ +..+++++.+++...... .....+...+++++|+++|++|+|||++|.|=
T Consensus 245 n~s~~sDGAaalvl~see~A~~~-g~~p~a~I~g~~~~~~~~-~~~~~~~~~a~~~Al~~AGl~p~DID~~ei~d 317 (392)
T PRK06633 245 NASSINDGAACLMVVSEEALKKH-NLTPLARIVSYASAGVDP-SIMGTAPVPASQKALSKAGWSVNDLEVIEVNE 317 (392)
T ss_pred hcCCccCceEEEEEecHHHHHHC-CCCeeEEEEEEEEecCCc-chhchHHHHHHHHHHHHcCCCHHHcCeeehhh
Confidence 457999999999999999987 778888888887653221 11225568999999999999999999999884
No 40
>cd00829 SCP-x_thiolase Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2 has multiple roles in intracellular lipid circulation and metabolism. The N-terminal presequence in the SCP-x isoform represents a peroxisomal 3-ketacyl-Coa thiolase specific for branched-chain acyl CoAs, which is proteolytically cleaved from the sterol carrier protein.
Probab=99.81 E-value=5.6e-19 Score=156.51 Aligned_cols=196 Identities=16% Similarity=0.170 Sum_probs=138.3
Q ss_pred hHHHHHHHHHHHHHHHCCCCCCCCCCCCeEEEEccCCCCccccccCccccchhhHhhhhhhhHHHHHHHHcCC-CCCCcc
Q psy4744 50 PLVRCFIEPCFEAILDAGINPKSLAGSNSSVYTNSCISDDESLGCDERLTTNFWLLAHVRCLLANRIAYLFDL-KGPSFT 128 (270)
Q Consensus 50 ~~~~l~l~a~~~Al~dAg~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl-~Gp~~~ 128 (270)
....|+.+|+++||+|+|+++++++ ++++++...... ...++..++..+|+ ..|.++
T Consensus 15 ~~~eL~~~A~~~Al~dagl~~~~Id----~vi~g~~~~~~~------------------~~~~a~~va~~lGl~~~~~~~ 72 (375)
T cd00829 15 SPLELAAEAARAALDDAGLEPADID----AVVVGNAAGGRF------------------QSFPGALIAEYLGLLGKPATR 72 (375)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCC----EEEEeccccccc------------------ccchHHHHHHHcCCCCcceee
Confidence 3568999999999999999888777 677776543221 12356778999998 468899
Q ss_pred ccccchhHHHHHHHHHHHHhcCCCCEEEEeeeccccCchhH---H------hhh---cCcccC-----------------
Q psy4744 129 IDNSWTGGIEVLRQAVQDISEGRVDTAIVGVSNLLLNANLN---S------LFQ---GLNRLS----------------- 179 (270)
Q Consensus 129 v~~~cas~~~al~~A~~~i~~G~~d~~lv~g~~~~~~~~~~---~------~~~---~~~~ls----------------- 179 (270)
++.+|+|++.+|..|+++|++|++|++||+|+|.+...... . .+. ..+.+.
T Consensus 73 v~~~c~sg~~al~~Aa~~I~sG~~~~vlv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~a~~~~~~~g 152 (375)
T cd00829 73 VEAAGASGSAAVRAAAAAIASGLADVVLVVGAEKMSDVPTGDEAGGRASDLEWEGPEPPGGLTPPALYALAARRYMHRYG 152 (375)
T ss_pred EeCccHHHHHHHHHHHHHHHhCCCCEEEEEEEeecccCcccchhhccccchhhhhcccccCCChHHHHHHHHHHHHHHhC
Confidence 99999999999999999999999999999999975542110 0 000 111111
Q ss_pred --------------CCCCCcccCC---------------------CCCceeecCeeEEEEecChHHHHhhcCceEeEEEe
Q psy4744 180 --------------PDGKTRSFDH---------------------LANGYARSEGIVVLLLQRSETALRSYGEVLHAESR 224 (270)
Q Consensus 180 --------------~~~~~~pfd~---------------------~~~g~~~geGA~alvL~~~~~A~~~~g~~~~~~~~ 224 (270)
.....+|+.. ..+...++|||+++||++++.|++. ..+.+.+.
T Consensus 153 ~t~e~~~~va~~~~~~A~~np~A~~~~~~t~d~~~~~~~i~~pl~~~~~~~~~DGaaa~vl~s~~~a~~~--~~~~~~i~ 230 (375)
T cd00829 153 TTREDLAKVAVKNHRNAARNPYAQFRKPITVEDVLNSRMIADPLRLLDCCPVSDGAAAVVLASEERAREL--TDRPVWIL 230 (375)
T ss_pred CCHHHHHHHHHHHHHHHhcCChhhcCCCCCHHHHhcCCcccCCCchhhcCCCCCceeEEEEecHHHHhhc--CCCCeEEE
Confidence 0001112111 1234468999999999999999875 34556666
Q ss_pred ccCCCCCCCc--C----CCHHHHHHHHHHHHHHcCCCCCCccEEEcccCCC
Q psy4744 225 FYGSLERPFV--G----FNQASLVEFFTNFYQKARVNPGQVDFLEADGSAI 269 (270)
Q Consensus 225 ~~~~~~~~~~--~----~~~~~~~~a~~~al~~agi~~~did~v~~hgtgt 269 (270)
+++...+... . ....+...+++++|++||++++|||++|+|.+-|
T Consensus 231 g~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~Agl~~~did~~ei~d~F~ 281 (375)
T cd00829 231 GVGAASDTPSLSERDDFLSLDAARLAARRAYKMAGITPDDIDVAELYDCFT 281 (375)
T ss_pred EEEEecCCccccccccccccHHHHHHHHHHHHHcCCCHHHCCEEEecCcCh
Confidence 6655433221 1 1456778999999999999999999999998643
No 41
>PRK09051 beta-ketothiolase; Provisional
Probab=99.81 E-value=3.9e-19 Score=157.48 Aligned_cols=194 Identities=18% Similarity=0.196 Sum_probs=136.2
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCeEEEEccCCCCccccccCccccchhhHhhhhhhhHHHHHHHHcCCC--CCCcc
Q psy4744 51 LVRCFIEPCFEAILDAGINPKSLAGSNSSVYTNSCISDDESLGCDERLTTNFWLLAHVRCLLANRIAYLFDLK--GPSFT 128 (270)
Q Consensus 51 ~~~l~l~a~~~Al~dAg~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl~--Gp~~~ 128 (270)
...|+.+|+++||+++|+++++|+ .|++|+....+.. ....+..++...|+. -|+++
T Consensus 27 ~~eL~~~A~~~AL~~agi~~~dID----~vi~g~~~~~~~~-----------------~~~~a~~~~~~~Gl~~~~p~~~ 85 (394)
T PRK09051 27 PTDLGATVVREALARAGVDPDQVG----HVVFGHVIPTEPR-----------------DMYLSRVAAINAGVPQETPAFN 85 (394)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHcC----EEEEeeeccccCC-----------------CccHHHHHHHHcCCCCCCceEE
Confidence 467999999999999999999988 6777765432210 012333455667884 59999
Q ss_pred ccccchhHHHHHHHHHHHHhcCCCCEEEEeeeccccCchh----------------HH----hhhc-C-----ccc----
Q psy4744 129 IDNSWTGGIEVLRQAVQDISEGRVDTAIVGVSNLLLNANL----------------NS----LFQG-L-----NRL---- 178 (270)
Q Consensus 129 v~~~cas~~~al~~A~~~i~~G~~d~~lv~g~~~~~~~~~----------------~~----~~~~-~-----~~l---- 178 (270)
|+++|+|++.|+..|+++|++|++|++||+|+|.+..... .. .+.. . +..
T Consensus 86 V~~aCaSg~~Al~~A~~~I~sG~~d~vLvvG~E~mS~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 165 (394)
T PRK09051 86 VNRLCGSGLQAIVSAAQAILLGDADVAIGGGAESMSRAPYLLPAARWGARMGDAKLVDMMVGALHDPFGTIHMGVTAENV 165 (394)
T ss_pred ecccchHHHHHHHHHHHHHHcCCCCEEEEEeehhcccCcccccccccccccCCchhhhhhcccccccccCCCHHHHHHHH
Confidence 9999999999999999999999999999999997653211 00 0000 0 000
Q ss_pred -------------------------------------------------CCCCCC------------cccCCC-------
Q psy4744 179 -------------------------------------------------SPDGKT------------RSFDHL------- 190 (270)
Q Consensus 179 -------------------------------------------------s~~~~~------------~pfd~~------- 190 (270)
.|+... +|+...
T Consensus 166 ~~~ygitre~~d~~avksh~~A~~a~~~g~~~~ei~p~~~~~~~~~~~~~~da~~r~~~t~e~v~~~~~v~~~~~g~lt~ 245 (394)
T PRK09051 166 AAKYGISREAQDALALESHRRAAAAIAAGYFKDQIVPVEIKTRKGEVVFDTDEHVRADTTLEDLAKLKPVFKKENGTVTA 245 (394)
T ss_pred HHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceeeeeeecCCCCCeEECCCCCCCCCCCHHHHcCCCCcccCCCccEeC
Confidence 001011 122111
Q ss_pred CCceeecCeeEEEEecChHHHHhhcCceEeEEEeccCCCCCCCcCCCHHHHHHHHHHHHHHcCCCCCCccEEEcccC
Q psy4744 191 ANGYARSEGIVVLLLQRSETALRSYGEVLHAESRFYGSLERPFVGFNQASLVEFFTNFYQKARVNPGQVDFLEADGS 267 (270)
Q Consensus 191 ~~g~~~geGA~alvL~~~~~A~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~agi~~~did~v~~hgt 267 (270)
.+...++|||+++||++++.|+++ +..+.+++.+++..... ..+...+...+++++|+++|++|+|||+||+|..
T Consensus 246 ~~~s~~~DGAaa~vl~s~~~a~~~-g~~~~~~I~g~~~~~~~-~~~~~~~~~~a~~~al~~agi~~~did~~ei~d~ 320 (394)
T PRK09051 246 GNASGINDGAAAVVLAEADAAEAR-GLKPLARLVGYAHAGVD-PEYMGIGPVPATQKALERAGLTVADLDVIEANEA 320 (394)
T ss_pred CcCCCCCCceEEEEEecHHHHHHC-CCCccEEEEEEEEeccC-CCcccccHHHHHHHHHHHcCCCHHHcCEEEecCc
Confidence 112245899999999999999877 77788888887764322 1223456789999999999999999999999974
No 42
>PRK09052 acetyl-CoA acetyltransferase; Provisional
Probab=99.81 E-value=8.7e-19 Score=155.42 Aligned_cols=193 Identities=16% Similarity=0.173 Sum_probs=135.7
Q ss_pred HHHHHHHHHHHHHHHC-CCCCCCCCCCCeEEEEccCCCCccccccCccccchhhHhhhhhhhHHHHHHHHcCCC--CCCc
Q psy4744 51 LVRCFIEPCFEAILDA-GINPKSLAGSNSSVYTNSCISDDESLGCDERLTTNFWLLAHVRCLLANRIAYLFDLK--GPSF 127 (270)
Q Consensus 51 ~~~l~l~a~~~Al~dA-g~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl~--Gp~~ 127 (270)
...|+.+|+++||+++ |+++++|| .|++|+...+... ....+..+...+|+. -|++
T Consensus 31 ~~eLa~~A~~~AL~~a~gl~~~dID----~vi~g~~~~~~~~-----------------~~~~ar~~~~~~Gl~~~~p~~ 89 (399)
T PRK09052 31 PDDLLAHVLRSAVAQVPGLDPKLIE----DAIVGCAMPEAEQ-----------------GLNVARIGALLAGLPNSVGGV 89 (399)
T ss_pred HHHHHHHHHHHHHHhccCcCHHHCC----EEEEEecCCCCCC-----------------CchHHHHHHHHcCCCCCCcee
Confidence 4679999999999997 99999998 7888865543210 112233345566885 3789
Q ss_pred cccccchhHHHHHHHHHHHHhcCCCCEEEEeeeccccCchh-H-----H--hhhc---Ccc---c-------------C-
Q psy4744 128 TIDNSWTGGIEVLRQAVQDISEGRVDTAIVGVSNLLLNANL-N-----S--LFQG---LNR---L-------------S- 179 (270)
Q Consensus 128 ~v~~~cas~~~al~~A~~~i~~G~~d~~lv~g~~~~~~~~~-~-----~--~~~~---~~~---l-------------s- 179 (270)
+|+++|+|++.|+..|+++|++|++|++||+|+|.+..... . . .+.. ... . +
T Consensus 90 ~V~~aCaSg~~Al~~A~~~I~sG~~d~vLv~G~E~mS~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~ygitr 169 (399)
T PRK09052 90 TVNRFCASGLQAVAMAADRIRVGEADVMIAAGVESMSMVPMMGNKPSMSPAIFARDENVGIAYGMGLTAEKVAEQWKVSR 169 (399)
T ss_pred eecchhhHHHHHHHHHHHHHHCCCCCEEEEEEEeccccCcccCcccccCcchhccCCcccccchHHHHHHHHHHHhCCCH
Confidence 99999999999999999999999999999999997654321 0 0 0000 000 0 0
Q ss_pred -----------------CCC-C------------Cc------------c-cCCC--------------------------
Q psy4744 180 -----------------PDG-K------------TR------------S-FDHL-------------------------- 190 (270)
Q Consensus 180 -----------------~~~-~------------~~------------p-fd~~-------------------------- 190 (270)
++. . .+ | ++.+
T Consensus 170 e~~d~~a~~sh~~a~~n~~ag~~~~ei~~~~v~~~~~~~~~~~~~~~~~~~~~D~~~r~~~~~e~l~~l~p~f~~~g~lt 249 (399)
T PRK09052 170 EDQDAFALESHQKAIAAQQAGEFKDEITPYEITERFPDLATGEVDVKTRTVDLDEGPRADTSLEGLAKLKPVFANKGSVT 249 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCceEeeEeccccccccccCcccccceEeccCCCCCCCCCHHHHhcCCCccCCCCcEE
Confidence 110 0 00 1 1000
Q ss_pred -CCceeecCeeEEEEecChHHHHhhcCceEeEEEeccCCCCCCCcCCCHHHHHHHHHHHHHHcCCCCCCccEEEccc
Q psy4744 191 -ANGYARSEGIVVLLLQRSETALRSYGEVLHAESRFYGSLERPFVGFNQASLVEFFTNFYQKARVNPGQVDFLEADG 266 (270)
Q Consensus 191 -~~g~~~geGA~alvL~~~~~A~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~agi~~~did~v~~hg 266 (270)
.+...++|||+++||++++.|+++ +..+.+++.+++..... ..+...+...+++++|+++|++|+|||++|.|-
T Consensus 250 ~~n~s~~~DGAaa~vl~se~~a~~~-g~~~~a~i~g~~~~~~~-~~~~~~~~~~A~~~al~~Agi~~~did~~ei~D 324 (399)
T PRK09052 250 AGNSSQTSDGAGAVILVSEKALKQF-NLTPLARFVSFAVAGVP-PEIMGIGPIEAIPAALKQAGLKQDDLDWIELNE 324 (399)
T ss_pred CCccCCCCCceEEEEEecHHHHHHC-CCCeeEEEEEEEEeccC-CCccchhHHHHHHHHHHHcCCCHHHcCEEEeCc
Confidence 112457999999999999999887 77788888888865322 222334678999999999999999999999985
No 43
>PRK07661 acetyl-CoA acetyltransferase; Provisional
Probab=99.81 E-value=6.3e-19 Score=156.04 Aligned_cols=193 Identities=17% Similarity=0.159 Sum_probs=135.9
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCeEEEEccCCCCccccccCccccchhhHhhhhhhhHHHHHHHHcCCC--CCCcc
Q psy4744 51 LVRCFIEPCFEAILDAGINPKSLAGSNSSVYTNSCISDDESLGCDERLTTNFWLLAHVRCLLANRIAYLFDLK--GPSFT 128 (270)
Q Consensus 51 ~~~l~l~a~~~Al~dAg~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl~--Gp~~~ 128 (270)
...|+.+++++||+|+|+.+++|+ .+++|+...+.. . ...++..++..+|+. -|.++
T Consensus 27 ~~eLa~~A~~~AL~~ag~~~~dID----~vi~g~~~~~~~--------------~---g~~~a~~~~~~lGl~~~~p~~~ 85 (391)
T PRK07661 27 PDDLGALVVKETLKRAGNYEGPID----DLIIGCAMPEAE--------------Q---GLNMARNIGALAGLPYTVPAIT 85 (391)
T ss_pred HHHHHHHHHHHHHHhcCCChhHCC----EEEEEecccccc--------------c---cchHHHHHHHHcCCCCCcceee
Confidence 367999999999999997767777 677775443210 0 012344578889987 49999
Q ss_pred ccccchhHHHHHHHHHHHHhcCCCCEEEEeeeccccCchhH---H-----------hh------------hcCcccC---
Q psy4744 129 IDNSWTGGIEVLRQAVQDISEGRVDTAIVGVSNLLLNANLN---S-----------LF------------QGLNRLS--- 179 (270)
Q Consensus 129 v~~~cas~~~al~~A~~~i~~G~~d~~lv~g~~~~~~~~~~---~-----------~~------------~~~~~ls--- 179 (270)
|+++|+||+.|+..|++.|++|++|++||+|+|.+...... . .+ ..+|...
T Consensus 86 V~~aCaSG~~Al~~A~~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~m~~~a~~~~~~~g~tre~~ 165 (391)
T PRK07661 86 INRYCSSGLQSIAYGAERIMLGHSEAVIAGGAESMSLVPMMGHVVRPNPRLVEAAPEYYMGMGHTAEQVAVKYGISREDQ 165 (391)
T ss_pred hhhhhhHHHHHHHHHHHHHHcCCCCEEEEEEEeecccCCccccccCCCccccccccchhhhHHHHHHHHHHHhCCCHHHH
Confidence 99999999999999999999999999999999976532100 0 00 0000000
Q ss_pred --------------CCC-CC---------------------------------c------------c-cC-----CCCCc
Q psy4744 180 --------------PDG-KT---------------------------------R------------S-FD-----HLANG 193 (270)
Q Consensus 180 --------------~~~-~~---------------------------------~------------p-fd-----~~~~g 193 (270)
+.. .. | | |. ...+.
T Consensus 166 a~~av~s~~~a~~n~~ag~~~~ei~pi~~~~~~~~~~~~~~~~~~~~~~d~~~rp~~~~e~l~~l~p~f~~~g~lt~~~~ 245 (391)
T PRK07661 166 DAFAVRSHQRAAKALAEGKFADEIVPVDVTLRTVGENNKLQEETITFSQDEGVRADTTLEILGKLRPAFNVKGSVTAGNS 245 (391)
T ss_pred HHHHHHHHHHHHHHHHcCCCccceeeeecccccccccCcccccceeEecCCCCCCCCCHHHHhcCCCCcCCCCCEecccc
Confidence 110 00 1 1 10 01122
Q ss_pred eeecCeeEEEEecChHHHHhhcCceEeEEEeccCCCCCCCcCCCHHHHHHHHHHHHHHcCCCCCCccEEEccc
Q psy4744 194 YARSEGIVVLLLQRSETALRSYGEVLHAESRFYGSLERPFVGFNQASLVEFFTNFYQKARVNPGQVDFLEADG 266 (270)
Q Consensus 194 ~~~geGA~alvL~~~~~A~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~agi~~~did~v~~hg 266 (270)
..++|||+++||++++.|++. +..+.+++.+++..... ..+...+...+++++|+++||+|+|||+||.|-
T Consensus 246 ~~~~DGAaavvl~s~~~A~~~-g~~~~~~i~g~~~~~~~-~~~~~~~~~~a~~~al~~agl~~~did~~ei~d 316 (391)
T PRK07661 246 SQMSDGAAAVLLMDREKAESD-GLKPLAKFRSFAVAGVP-PEVMGIGPIAAIPKALKLAGLELSDIGLFELNE 316 (391)
T ss_pred CCCCCceEEEEEecHHHHHHC-CCCceEEEEEEEEecCC-CcccchHHHHHHHHHHHHcCCCHHHCCEEEeCC
Confidence 347999999999999999887 77788888888765322 222334678999999999999999999999984
No 44
>PLN02287 3-ketoacyl-CoA thiolase
Probab=99.80 E-value=1.2e-18 Score=156.30 Aligned_cols=193 Identities=13% Similarity=0.169 Sum_probs=134.7
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCeEEEEccCCCCccccccCccccchhhHhhhhhhhHHHHHHHHcCCCC--CCcc
Q psy4744 51 LVRCFIEPCFEAILDAGINPKSLAGSNSSVYTNSCISDDESLGCDERLTTNFWLLAHVRCLLANRIAYLFDLKG--PSFT 128 (270)
Q Consensus 51 ~~~l~l~a~~~Al~dAg~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl~G--p~~~ 128 (270)
...|+.+|+++||+|+|+++++|+ +|++|+....+.. ....+..++..+|+.. |.++
T Consensus 71 ~~eLa~eA~~~AL~dAgl~~~dID----~vv~G~~~~~~~~-----------------~~~~~r~~a~~~Gl~~~~pa~~ 129 (452)
T PLN02287 71 PDDLLAPVLKAVVEKTGLNPSEVG----DIVVGTVLAPGSQ-----------------RANECRMAAFYAGFPETVPVRT 129 (452)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC----EEEEEeecCcccc-----------------cchHHHHHHHHCCCCCCcceEE
Confidence 478999999999999999999998 6777765433210 0112334667789864 8899
Q ss_pred ccccchhHHHHHHHHHHHHhcCCCCEEEEeeeccccCchhHH---------hhh-------cCccc----------C---
Q psy4744 129 IDNSWTGGIEVLRQAVQDISEGRVDTAIVGVSNLLLNANLNS---------LFQ-------GLNRL----------S--- 179 (270)
Q Consensus 129 v~~~cas~~~al~~A~~~i~~G~~d~~lv~g~~~~~~~~~~~---------~~~-------~~~~l----------s--- 179 (270)
|+.+|+||+.|+..|+++|++|.+|++||+|+|.+....... .+. .++.. +
T Consensus 130 V~~~CaSG~~Ai~~Aa~~I~sG~~dvvLv~GvE~mS~~p~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~y~~~yGitrE~ 209 (452)
T PLN02287 130 VNRQCSSGLQAVADVAAAIKAGFYDIGIGAGVESMTTNPMAWEGGVNPRVESFSQAQDCLLPMGITSENVAERFGVTREE 209 (452)
T ss_pred EeccCchHHHHHHHHHHHHHcCCCCeEEEEeEEecCCCchhhccccCchhhccccccccCcCHHHHHHHHHHHhCCCHHH
Confidence 999999999999999999999999999999999764321100 000 01100 0
Q ss_pred ---------------CCC-CCc---------------------ccCCC---------------------------CCcee
Q psy4744 180 ---------------PDG-KTR---------------------SFDHL---------------------------ANGYA 195 (270)
Q Consensus 180 ---------------~~~-~~~---------------------pfd~~---------------------------~~g~~ 195 (270)
+.. ..+ .++.+ .+...
T Consensus 210 la~vAvksh~nAa~np~ag~f~~ei~pv~~~~~~~~~~~~~~~~~~~De~~r~~~~~e~l~~l~~v~~~~g~lt~~~~s~ 289 (452)
T PLN02287 210 QDQAAVESHRKAAAATASGKFKDEIVPVHTKIVDPKTGEEKPIVISVDDGIRPNTTLADLAKLKPVFKKNGTTTAGNSSQ 289 (452)
T ss_pred HHHHHHHHHHHHHhhhhcCCcccceeeeeccccccccCCccceeecccCCCCCCCCHHHHhcCCCccCCCCCEeccccCC
Confidence 110 000 11111 13345
Q ss_pred ecCeeEEEEecChHHHHhhcCceEeEEEeccCCCCCCCcCCCHHHHHHHHHHHHHHcCCCCCCccEEEccc
Q psy4744 196 RSEGIVVLLLQRSETALRSYGEVLHAESRFYGSLERPFVGFNQASLVEFFTNFYQKARVNPGQVDFLEADG 266 (270)
Q Consensus 196 ~geGA~alvL~~~~~A~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~agi~~~did~v~~hg 266 (270)
++|||+++||++++.|+++ +..+.+.+.+++..... ..+...+..++++++|+++||+|+|||++|.|-
T Consensus 290 ~sDGAaalvl~see~A~~~-~~~~~a~~~~~~~~~~~-~~~~~~~~~~A~~~al~~Agl~~~DID~~Ei~d 358 (452)
T PLN02287 290 VSDGAGAVLLMKRSVAMQK-GLPILGVFRSFAAVGVD-PAVMGIGPAVAIPAAVKAAGLELDDIDLFEINE 358 (452)
T ss_pred cCCceEEEEEeeHHHHHHC-CCCeEEEEEEEeeccCC-CccchHHHHHHHHHHHHHcCCCHHHCCEEEecc
Confidence 7999999999999999886 77777777776532211 222334578999999999999999999999984
No 45
>PRK07516 acetyl-CoA acetyltransferase; Provisional
Probab=99.80 E-value=1e-18 Score=155.12 Aligned_cols=196 Identities=14% Similarity=0.156 Sum_probs=130.0
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCeEEEEccCCCCccccccCccccchhhHhhhhhhhHHHHHHHHcCCC-CCCccc
Q psy4744 51 LVRCFIEPCFEAILDAGINPKSLAGSNSSVYTNSCISDDESLGCDERLTTNFWLLAHVRCLLANRIAYLFDLK-GPSFTI 129 (270)
Q Consensus 51 ~~~l~l~a~~~Al~dAg~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl~-Gp~~~v 129 (270)
...|+.+|+++||+|+|+++++|+ +|++|+..+.+... . . .. +..+...++++ .|.++|
T Consensus 22 ~~eL~~eA~~~AL~dAgl~~~dId----~vi~g~~~~~~~~~---~-------~----~~--~~~~~~~~gl~~~p~~~v 81 (389)
T PRK07516 22 LESLIVRVAREALAHAGIAAGDVD----GIFLGHFNAGFSPQ---D-------F----PA--SLVLQADPALRFKPATRV 81 (389)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC----EEEEEEecCCcccc---c-------c----ch--hHHHHHhcCCCCCceeee
Confidence 468999999999999999998888 77787654332100 0 0 00 11123344664 488999
Q ss_pred cccchhHHHHHHHHHHHHhcCCCCEEEEeeeccccCchhHH--------hhhc------Ccc------c----------C
Q psy4744 130 DNSWTGGIEVLRQAVQDISEGRVDTAIVGVSNLLLNANLNS--------LFQG------LNR------L----------S 179 (270)
Q Consensus 130 ~~~cas~~~al~~A~~~i~~G~~d~~lv~g~~~~~~~~~~~--------~~~~------~~~------l----------s 179 (270)
+++|+|++.||..|++.|++|++|++||+|+|.+....... .+.. .+. . +
T Consensus 82 ~~~CaSg~~Al~~A~~~I~sG~~d~vLvvg~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~a~~y~~~yg~~ 161 (389)
T PRK07516 82 ENACATGSAAVYAALDAIEAGRARIVLVVGAEKMTATPTAEVGDILLGASYLKEEGDTPGGFAGVFGRIAQAYFQRYGDQ 161 (389)
T ss_pred ccccHHHHHHHHHHHHHHHCCCCCEEEEEEehhhccCcchhhHHHhhhccccccccccCCCcHHHHHHHHHHHHHHHCCC
Confidence 99999999999999999999999999999998754321100 0000 000 0 0
Q ss_pred ------------CCCCCcc-------cCC------------------CCCceeecCeeEEEEecChHHHHhhcCceEeEE
Q psy4744 180 ------------PDGKTRS-------FDH------------------LANGYARSEGIVVLLLQRSETALRSYGEVLHAE 222 (270)
Q Consensus 180 ------------~~~~~~p-------fd~------------------~~~g~~~geGA~alvL~~~~~A~~~~g~~~~~~ 222 (270)
.+...+| ++. .-+...++|||+++||++++.|++. +. .++
T Consensus 162 ~e~~a~vav~~~~~A~~nP~A~~~~~~t~~~~~~~~~~~~~i~~pl~~~d~~~~~DGAaa~il~s~~~a~~~-~~--~v~ 238 (389)
T PRK07516 162 SDALAMIAAKNHANGVANPYAQMRKDLGFEFCRTVSEKNPLVAGPLRRTDCSLVSDGAAALVLADAETARAL-QR--AVR 238 (389)
T ss_pred HHHHHHHHHHHHHhhhcCChhhcCCcccHHhhhhhhhcCCcccCCCchhhcCCcCcceEEEEEecHHHHHhc-CC--CEE
Confidence 0001111 111 1233457999999999999999875 43 345
Q ss_pred EeccCCCCCCC-----cCCCHHHHHHHHHHHHHHcCCCCCCccEEEcccCCC
Q psy4744 223 SRFYGSLERPF-----VGFNQASLVEFFTNFYQKARVNPGQVDFLEADGSAI 269 (270)
Q Consensus 223 ~~~~~~~~~~~-----~~~~~~~~~~a~~~al~~agi~~~did~v~~hgtgt 269 (270)
+.+.+...+.. ......+...+++++|+++|++|+|||++|+|.+.|
T Consensus 239 i~g~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~agl~~~did~~e~~d~f~ 290 (389)
T PRK07516 239 FRARAHVNDFLPLSRRDPLAFEGPRRAWQRALAQAGVTLDDLSFVETHDCFT 290 (389)
T ss_pred EEEEEeccCcccccCCCccccHHHHHHHHHHHHHcCCCHHHCCEEEEecCCC
Confidence 55555432211 111346678999999999999999999999999865
No 46
>PRK08242 acetyl-CoA acetyltransferase; Validated
Probab=99.80 E-value=7.7e-19 Score=155.39 Aligned_cols=193 Identities=16% Similarity=0.143 Sum_probs=135.4
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCeEEEEccCCCCccccccCccccchhhHhhhhhhhHHHHHHHHcCC--CCCCcc
Q psy4744 51 LVRCFIEPCFEAILDAGINPKSLAGSNSSVYTNSCISDDESLGCDERLTTNFWLLAHVRCLLANRIAYLFDL--KGPSFT 128 (270)
Q Consensus 51 ~~~l~l~a~~~Al~dAg~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl--~Gp~~~ 128 (270)
...|+.+|++++|+++|+++++|+ .|++|+....... ...++...+...|+ +-|+++
T Consensus 28 ~~dLa~~A~~~al~~agi~p~~ID----~vi~G~~~~~~~~-----------------~~~~~r~a~~~~Gl~~~~pa~~ 86 (402)
T PRK08242 28 PVRLAAGLLEALRDRNGLDTAAVD----DVVLGCVTPVGDQ-----------------GADIARTAVLAAGLPETVPGVQ 86 (402)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHcC----EEEEEecCCCccc-----------------cccHHHHHHHHcCCCCCCCeEE
Confidence 446888999999999999999888 5777765532110 12234445567787 348999
Q ss_pred ccccchhHHHHHHHHHHHHhcCCCCEEEEeeeccccCchh-H-------H---h----hhcCccc---------------
Q psy4744 129 IDNSWTGGIEVLRQAVQDISEGRVDTAIVGVSNLLLNANL-N-------S---L----FQGLNRL--------------- 178 (270)
Q Consensus 129 v~~~cas~~~al~~A~~~i~~G~~d~~lv~g~~~~~~~~~-~-------~---~----~~~~~~l--------------- 178 (270)
|+.+|+|++.||..|+++|++|++|++|++|+|.+..... . . . +..++..
T Consensus 87 Vn~aCaSg~~Ai~~A~~~I~sG~~d~vLv~G~E~mS~~p~~~~~~~~~~~~~~~~~~~~~~mg~~Ae~~a~~~gisRe~~ 166 (402)
T PRK08242 87 INRFCASGLEAVNLAAAKVRSGWDDLVIAGGVESMSRVPMGSDGGAWAMDPSTNFPTYFVPQGISADLIATKYGFSREDV 166 (402)
T ss_pred EcchhhhHHHHHHHHHHHHHcCCCCEEEEEEEEccCCCcccccCcccccCcccccccccCCHHHHHHHHHHHhCCCHHHH
Confidence 9999999999999999999999999999999998654221 0 0 0 0001110
Q ss_pred ------------------------------------CCCCCCc------------c-cCCCC------------------
Q psy4744 179 ------------------------------------SPDGKTR------------S-FDHLA------------------ 191 (270)
Q Consensus 179 ------------------------------------s~~~~~~------------p-fd~~~------------------ 191 (270)
.++...| | |+...
T Consensus 167 d~~A~~Sh~~A~~A~~~g~f~~ei~pv~~~~~~~~~~~de~~r~~~t~e~l~~l~p~f~~~~~~~g~~~~~~~~~~~~~~ 246 (402)
T PRK08242 167 DAYAVESQQRAAAAWAEGYFAKSVVPVKDQNGLTILDHDEHMRPGTTMESLAKLKPSFAMMGEMGGFDAVALQKYPEVER 246 (402)
T ss_pred HHHHHHHHHHHHHHHHcCCCcceeeeeecCCCCEeeCCCCCCCCCCCHHHHhCCCCCccCccccCccccccccccccccc
Confidence 0111112 1 33211
Q ss_pred --------CceeecCeeEEEEecChHHHHhhcCceEeEEEeccCCCCCCCcCCCHHHHHHHHHHHHHHcCCCCCCccEEE
Q psy4744 192 --------NGYARSEGIVVLLLQRSETALRSYGEVLHAESRFYGSLERPFVGFNQASLVEFFTNFYQKARVNPGQVDFLE 263 (270)
Q Consensus 192 --------~g~~~geGA~alvL~~~~~A~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~agi~~~did~v~ 263 (270)
+...++|||+++||++++.|+++ +..+++++.+++..... ......+...+++++|+++|++++|||++|
T Consensus 247 ~~~~vTagn~s~~~DGAaAlvl~s~e~A~~~-g~~p~a~I~g~~~~~~~-~~~~~~~~~~a~~~al~~AGl~~~DID~~e 324 (402)
T PRK08242 247 INHVHHAGNSSGIVDGAAAVLIGSEEAGKAL-GLKPRARIVATATIGSD-PTIMLTGPVPATRKALAKAGLTVDDIDLFE 324 (402)
T ss_pred ccCceecCcCCCCCCceEEEEEecHHHHHHc-CCCCcEEEEEEEEecCC-chhhcccHHHHHHHHHHHcCCCHHHCCEEE
Confidence 22357999999999999999987 77777888887754321 111223457899999999999999999999
Q ss_pred ccc
Q psy4744 264 ADG 266 (270)
Q Consensus 264 ~hg 266 (270)
.|-
T Consensus 325 i~d 327 (402)
T PRK08242 325 LNE 327 (402)
T ss_pred ecc
Confidence 984
No 47
>PRK08131 acetyl-CoA acetyltransferase; Provisional
Probab=99.80 E-value=6.3e-19 Score=156.30 Aligned_cols=192 Identities=15% Similarity=0.118 Sum_probs=134.6
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCCeEEEEccCCCCccccccCccccchhhHhhhhhhhHHHHHHHHcCCC--CCCccc
Q psy4744 52 VRCFIEPCFEAILDAGINPKSLAGSNSSVYTNSCISDDESLGCDERLTTNFWLLAHVRCLLANRIAYLFDLK--GPSFTI 129 (270)
Q Consensus 52 ~~l~l~a~~~Al~dAg~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl~--Gp~~~v 129 (270)
..|+.+++++||+|+|+++++|+ .+++|+...+... ...++..++...|+. -|.++|
T Consensus 27 ~eL~~~a~~~al~~agi~~~~Id----~v~~G~~~~~~~~-----------------~~~~ar~~~~~~Glp~~~p~~tV 85 (401)
T PRK08131 27 DDLAATVIRRLLEKSGFPGDDIE----DVILGCTNQAGED-----------------SRNVARNALLLAGLPVTVPGQTV 85 (401)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC----EEEEEeccccccc-----------------cccHHHHHHHhcCCCCCCceeee
Confidence 67899999999999999999988 6777755322100 012344577778875 589999
Q ss_pred cccchhHHHHHHHHHHHHhcCCCCEEEEeeeccccCchh---------------HHhh-------hc----Ccc-----c
Q psy4744 130 DNSWTGGIEVLRQAVQDISEGRVDTAIVGVSNLLLNANL---------------NSLF-------QG----LNR-----L 178 (270)
Q Consensus 130 ~~~cas~~~al~~A~~~i~~G~~d~~lv~g~~~~~~~~~---------------~~~~-------~~----~~~-----l 178 (270)
+++|+||+.|+..|++.|++|++|++||+|+|.+..... +..+ .. ... .
T Consensus 86 ~~~CaSG~~Ai~~A~~~I~sG~~dvvlagG~Esms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~mg~~ 165 (401)
T PRK08131 86 NRLCASGLAAVIDAARAITCGEGDLYLAGGVESMSRAPFVMGKAESAFSRDAKVFDTTIGARFPNPKIVAQYGNDSMPET 165 (401)
T ss_pred echhhhHHHHHHHHHHHHHCCCCCEEEEEEecCCCCCcccccccccccccCcchhhhhhcccccCcccccccccCCHHHH
Confidence 999999999999999999999999999999997653221 0000 00 000 0
Q ss_pred ----------C-------------------CCC----CCcccCCC-----------------------------------
Q psy4744 179 ----------S-------------------PDG----KTRSFDHL----------------------------------- 190 (270)
Q Consensus 179 ----------s-------------------~~~----~~~pfd~~----------------------------------- 190 (270)
+ +.+ ...|.+.+
T Consensus 166 ae~~~~~ygitre~~d~vA~~S~~~~~~a~~~~~~~~~i~pi~v~~~~~~~~~~v~~De~~r~~~~~e~L~~l~p~f~~g 245 (401)
T PRK08131 166 GDNVAAEFGISREDADRFAAQSQAKYQAAKEEGFFADEITPIEVPQGRKLPPKLVAEDEHPRPSSTVEALTKLKPLFEGG 245 (401)
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhCCCCCCceeeEEeccccCCCceEEecCCCCCCCCCHHHHhcCCCCCCCC
Confidence 0 000 00021100
Q ss_pred ----CCceeecCeeEEEEecChHHHHhhcCceEeEEEeccCCCCCCCcCCCHHHHHHHHHHHHHHcCCCCCCccEEEccc
Q psy4744 191 ----ANGYARSEGIVVLLLQRSETALRSYGEVLHAESRFYGSLERPFVGFNQASLVEFFTNFYQKARVNPGQVDFLEADG 266 (270)
Q Consensus 191 ----~~g~~~geGA~alvL~~~~~A~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~agi~~~did~v~~hg 266 (270)
.+...++|||+++||.+++.|++. +..+.+++.+++..... ......+...+++++|+++|++|+|||++|.|-
T Consensus 246 ~lt~~~~s~~~DGAaa~vl~s~~~a~~~-~~~p~~~i~g~~~~~~~-~~~~~~~~~~a~~~a~~~agl~~~did~~ei~d 323 (401)
T PRK08131 246 VVTAGNASGINDGAAALLIGSRAAGEKY-GLKPMARILSSAAAGVE-PRIMGIGPVEAIKKALARAGLTLDDMDIIEINE 323 (401)
T ss_pred CccCCcCCCCCCceEEEEEeeHHHHHHc-CCCceEEEEEEEEeccC-CccccchHHHHHHHHHHHcCCCHHHCCeehhcc
Confidence 044467999999999999999876 66677777776654322 112234678999999999999999999999984
No 48
>TIGR01930 AcCoA-C-Actrans acetyl-CoA acetyltransferases. This model represents a large family of enzymes which catalyze the thiolysis of a linear fatty acid CoA (or acetoacetyl-CoA) using a second CoA molecule to produce acetyl-CoA and a CoA-ester product two carbons shorter (or, alternatively, the condensation of two molecules of acetyl-CoA to produce acetoacetyl-CoA and CoA). This enzyme is also known as "thiolase", "3-ketoacyl-CoA thiolase", "beta-ketothiolase" and "Fatty oxidation complex beta subunit". When catalyzing the degradative reaction on fatty acids the corresponding EC number is 2.3.1.16. The condensation reaction corresponds to 2.3.1.9. Note that the enzymes which catalyze the condensation are generally not involved in fatty acid biosynthesis, which is carried out by a decarboxylating condensation of acetyl and malonyl esters of acyl carrier proteins. Rather, this activity may produce acetoacetyl-CoA for pathways such as IPP biosynthesis in the absence of sufficient fatt
Probab=99.80 E-value=5.6e-19 Score=156.55 Aligned_cols=194 Identities=17% Similarity=0.170 Sum_probs=136.0
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCeEEEEccCCCCccccccCccccchhhHhhhhhhhHHHHHHHHcCCC--CCCcc
Q psy4744 51 LVRCFIEPCFEAILDAGINPKSLAGSNSSVYTNSCISDDESLGCDERLTTNFWLLAHVRCLLANRIAYLFDLK--GPSFT 128 (270)
Q Consensus 51 ~~~l~l~a~~~Al~dAg~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl~--Gp~~~ 128 (270)
...|+.+|+++||+|||+++++|| ++++++...+... ...+..++..+|+. .|++.
T Consensus 21 ~~~La~~A~~~Al~dAgl~~~dID----~vv~g~~~~~~~~------------------~~~a~~va~~lGl~~~~~~~~ 78 (386)
T TIGR01930 21 AEDLGAAVIKELLERNPLDPELID----DVIFGNVLQAGEQ------------------QNIARQAALLAGLPESVPAYT 78 (386)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC----EEEEEeccCCCCC------------------ChHHHHHHHHcCCCCCceeee
Confidence 478999999999999999999988 6777654332210 12344577888985 48899
Q ss_pred ccccchhHHHHHHHHHHHHhcCCCCEEEEeeeccccCchhH----------H-h------hhcCcc------cC------
Q psy4744 129 IDNSWTGGIEVLRQAVQDISEGRVDTAIVGVSNLLLNANLN----------S-L------FQGLNR------LS------ 179 (270)
Q Consensus 129 v~~~cas~~~al~~A~~~i~~G~~d~~lv~g~~~~~~~~~~----------~-~------~~~~~~------ls------ 179 (270)
|+++|+|++.+|..|+++|++|++|.+||+|+|.+...... . . ....+. ..
T Consensus 79 v~~~Casg~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~a~~a~ 158 (386)
T TIGR01930 79 VNRQCASGLQAVILAAQLIRAGEADVVVAGGVESMSRVPYSLPRSRREGVDPGRFELEDQILKDGLTDPLNGLSMGLTAE 158 (386)
T ss_pred ecchhhHHHHHHHHHHHHHHCCCCCEEEEEEehhhccCccccccccccccccCccccchhhcCccccccccCCCHHHHHH
Confidence 99999999999999999999999999999998863321100 0 0 000010 00
Q ss_pred ---------------------CCCCC--c---------ccC--------------CC-----------------------
Q psy4744 180 ---------------------PDGKT--R---------SFD--------------HL----------------------- 190 (270)
Q Consensus 180 ---------------------~~~~~--~---------pfd--------------~~----------------------- 190 (270)
.+... + |.. ..
T Consensus 159 ~y~~~yG~t~e~la~vav~~~~~A~~n~~~g~~~~~i~P~a~~~~~~~~~~~~da~~r~~~t~e~v~~s~~i~~P~~~l~ 238 (386)
T TIGR01930 159 NLAKKYGISREEQDEYALRSHQRAAKAWEEGLFKDEIVPVSVKGRKGPVTVSTDEGIRPNTTLEKLAKLKPAFDPNGTVT 238 (386)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEEeccCCCCeEeCCCCCCCCCCCHHHHhCCCCCcCCCCeee
Confidence 00000 0 420 01
Q ss_pred -CCceeecCeeEEEEecChHHHHhhcCceEeEEEeccCCCCCCCcCCCHHHHHHHHHHHHHHcCCCCCCccEEEcccCC
Q psy4744 191 -ANGYARSEGIVVLLLQRSETALRSYGEVLHAESRFYGSLERPFVGFNQASLVEFFTNFYQKARVNPGQVDFLEADGSA 268 (270)
Q Consensus 191 -~~g~~~geGA~alvL~~~~~A~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~agi~~~did~v~~hgtg 268 (270)
-+...++|||+++||++++.|+++ +..+++++.+++..... ..+......++++++|+++|++|+|||++|+|-+-
T Consensus 239 ~~d~~~~~dGAaa~vl~s~~~A~~~-~~~~~~~i~g~g~~~~~-~~~~~~~~~~a~~~a~~~Agi~~~did~~e~~d~f 315 (386)
T TIGR01930 239 AGNSSPLNDGAAALLLMSEERAKEL-GLTPLARIVSFAVAGVD-PEIMGLGPVPAIPKALKKAGLSISDIDLFEINEAF 315 (386)
T ss_pred CCccCCCCcceeEEEEecHHHHHHC-CCCccEEEEEEEEecCC-CccccccHHHHHHHHHHHcCCCHHHCCeeehcchh
Confidence 122245899999999999999987 77777888888764321 12223456799999999999999999999999754
No 49
>PRK05790 putative acyltransferase; Provisional
Probab=99.79 E-value=1.8e-18 Score=153.89 Aligned_cols=193 Identities=17% Similarity=0.151 Sum_probs=132.2
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCeEEEEccCCCCccccccCccccchhhHhhhhhhhHHHHHHHHcCCC--CCCcc
Q psy4744 51 LVRCFIEPCFEAILDAGINPKSLAGSNSSVYTNSCISDDESLGCDERLTTNFWLLAHVRCLLANRIAYLFDLK--GPSFT 128 (270)
Q Consensus 51 ~~~l~l~a~~~Al~dAg~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl~--Gp~~~ 128 (270)
...|+.+|+++||+|||+++++|| ++++|+...... ....+..+...+|+. -|.++
T Consensus 26 ~~~La~~A~~~AL~dAgl~~~dID----~vi~g~~~~~~~------------------~~~~~~~~~~~~gl~~~~~~~~ 83 (393)
T PRK05790 26 AVELGAIVIKAALERAGVPPEQVD----EVIMGQVLQAGA------------------GQNPARQAALKAGLPVEVPALT 83 (393)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC----eEEEEEecCCCC------------------CCcHHHHHHHHcCCCCCCceee
Confidence 468999999999999999999998 667765432110 001222244556774 48999
Q ss_pred ccccchhHHHHHHHHHHHHhcCCCCEEEEeeeccccCchh---------------H-Hh--hh-cCcccC----------
Q psy4744 129 IDNSWTGGIEVLRQAVQDISEGRVDTAIVGVSNLLLNANL---------------N-SL--FQ-GLNRLS---------- 179 (270)
Q Consensus 129 v~~~cas~~~al~~A~~~i~~G~~d~~lv~g~~~~~~~~~---------------~-~~--~~-~~~~ls---------- 179 (270)
|+.+|+|++.+|..|+++|++|++|++||+|+|.+..... . .. +. ..+...
T Consensus 84 v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~a~~ 163 (393)
T PRK05790 84 INKVCGSGLKAVALAAQAIRAGDADIVVAGGQESMSQAPHVLPGSRWGQKMGDVELVDTMIHDGLTDAFNGYHMGITAEN 163 (393)
T ss_pred ecccchHHHHHHHHHHHHHHcCCCCEEEEEeeeccccCcccccccccccccCcchhhhhhcccccccccCCCCHHHHHHH
Confidence 9999999999999999999999999999999987432110 0 00 00 000000
Q ss_pred --------------------------CCC-C----Cccc---------------------------CCC-----C-----
Q psy4744 180 --------------------------PDG-K----TRSF---------------------------DHL-----A----- 191 (270)
Q Consensus 180 --------------------------~~~-~----~~pf---------------------------d~~-----~----- 191 (270)
+.. . ..|. ... .
T Consensus 164 y~~~yG~tre~la~vav~~~~~A~~~~~~g~~~~~i~P~~~~~~~~~~~~~~~d~~~~~~~~~e~l~~~~~v~~~~g~lt 243 (393)
T PRK05790 164 LAEQYGITREEQDEFALASQQKAEAAIKAGRFKDEIVPVTIKQRKGDPVVVDTDEHPRPDTTAESLAKLRPAFDKDGTVT 243 (393)
T ss_pred HHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceEeeEEecCCCCCceEecCCCCCCCCCCHHHHhCCCCccCCCCCEe
Confidence 000 0 0011 000 0
Q ss_pred --CceeecCeeEEEEecChHHHHhhcCceEeEEEeccCCCCCCCcCCCHHHHHHHHHHHHHHcCCCCCCccEEEcccC
Q psy4744 192 --NGYARSEGIVVLLLQRSETALRSYGEVLHAESRFYGSLERPFVGFNQASLVEFFTNFYQKARVNPGQVDFLEADGS 267 (270)
Q Consensus 192 --~g~~~geGA~alvL~~~~~A~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~agi~~~did~v~~hgt 267 (270)
+...++|||+++||++++.|++. +..+.+++.+++..... ..+...+...+++++|+++|++|+|||++|+|-.
T Consensus 244 ~~d~~~~~DGAaavvl~s~e~a~~~-~~~~~~~I~g~~~~~~~-~~~~~~~~~~a~~~a~~~Agi~~~did~~e~~d~ 319 (393)
T PRK05790 244 AGNASGINDGAAAVVVMSEAKAKEL-GLTPLARIVSYAVAGVD-PAIMGIGPVPAIRKALEKAGWSLADLDLIEINEA 319 (393)
T ss_pred CCcCCCCCCceEEEEEecHHHHHHC-CCCeeEEEEEEEEccCC-CCccchhHHHHHHHHHHHcCCCHHHCCEEEeCcH
Confidence 34467999999999999999876 66777788888765322 1122345678999999999999999999999964
No 50
>PRK08256 lipid-transfer protein; Provisional
Probab=99.79 E-value=1.4e-18 Score=154.40 Aligned_cols=193 Identities=17% Similarity=0.159 Sum_probs=130.0
Q ss_pred ChHHHHHHHHHHHHHHHCCCCCCCCCCCCeEEEEccCCCCccccccCccccchhhHhhhhhhhHHHHHHHHcCCCC-CCc
Q psy4744 49 DPLVRCFIEPCFEAILDAGINPKSLAGSNSSVYTNSCISDDESLGCDERLTTNFWLLAHVRCLLANRIAYLFDLKG-PSF 127 (270)
Q Consensus 49 ~~~~~l~l~a~~~Al~dAg~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl~G-p~~ 127 (270)
.+..+|+.+|+++||+|||+++++++...+|.+.+... ....+...+|+++ |.+
T Consensus 20 ~~~~~La~~A~~~Al~dAGl~~~dID~~~~g~~~~~~~-------------------------~~~~~~~~lGl~~~~~~ 74 (391)
T PRK08256 20 WDYPDMAAEAGRAALADAGIDYDAVQQAYVGYVYGDST-------------------------SGQRALYEVGMTGIPIV 74 (391)
T ss_pred CCHHHHHHHHHHHHHHHcCCChHHCCeeEEEEEeCCcc-------------------------hhHHHHHHcCCCCCCCc
Confidence 34578999999999999999998888544444433210 0012455789988 999
Q ss_pred cccccchhHHHHHHHHHHHHhcCCCCEEEEeeeccccCchh----------HHhh-------hcCc-ccC----------
Q psy4744 128 TIDNSWTGGIEVLRQAVQDISEGRVDTAIVGVSNLLLNANL----------NSLF-------QGLN-RLS---------- 179 (270)
Q Consensus 128 ~v~~~cas~~~al~~A~~~i~~G~~d~~lv~g~~~~~~~~~----------~~~~-------~~~~-~ls---------- 179 (270)
+|+++|+|++.+|..|+++|++|++|+|||+|+|.+..... ...+ .... ...
T Consensus 75 ~v~~~caSg~~ai~~A~~~I~sG~~d~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~a~ 154 (391)
T PRK08256 75 NVNNNCSTGSTALFLARQAVRSGAADCALALGFEQMQPGALGSVWDDRPSPLERFDKALAELQGFDPAPPALRMFGGAGR 154 (391)
T ss_pred ccccccHHHHHHHHHHHHHHHCCCCCEEEEEEEeeccccccccccccccchhhhhhhhhhhhcccccCCccHHHHHHHHH
Confidence 99999999999999999999999999999999987532100 0000 0000 100
Q ss_pred ---------------------CCCCCcccCCC---------------------CCceeecCeeEEEEecChHHHHhhcCc
Q psy4744 180 ---------------------PDGKTRSFDHL---------------------ANGYARSEGIVVLLLQRSETALRSYGE 217 (270)
Q Consensus 180 ---------------------~~~~~~pfd~~---------------------~~g~~~geGA~alvL~~~~~A~~~~g~ 217 (270)
.+...+|.... -+...++|||+|+||.+++.|++. +.
T Consensus 155 ~y~~~~G~t~e~~a~vav~~~~~A~~np~A~~~~~~t~e~~~~s~~i~~Pl~~~d~~~~~DGAaA~il~s~~~a~~~-~~ 233 (391)
T PRK08256 155 EHMEKYGTTAETFAKIGVKARRHAANNPYAQFRDEYTLEDVLASPMIWGPLTRLQCCPPTCGAAAAIVCSEEFARKH-GL 233 (391)
T ss_pred HHHHHhCCCHHHHHHHHHHHHHhhhcCChhhcCCCCCHHHHhcCCcccCCCcHhhcCCCCCCeEEEEEecHHHHHhc-CC
Confidence 00111221111 122346999999999999999865 43
Q ss_pred eEeEEEeccCCCCCCCcC-C--------CHHHHHHHHHHHHHHcCCCCCCccEEEcccC
Q psy4744 218 VLHAESRFYGSLERPFVG-F--------NQASLVEFFTNFYQKARVNPGQVDFLEADGS 267 (270)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~-~--------~~~~~~~a~~~al~~agi~~~did~v~~hgt 267 (270)
.+.+++.+.+...+.... . .......+.+++|+++|++++|||++|+|-.
T Consensus 234 ~~~v~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~ag~~~~DiD~~ei~d~ 292 (391)
T PRK08256 234 DRAVEIVAQAMTTDTPSTFDGRSMIDLVGYDMTRAAAQQVYEQAGIGPEDIDVVELHDC 292 (391)
T ss_pred CCCEEEEEEEEeccccccccccccccccccHHHHHHHHHHHHHcCCCHHHCCEEeeccC
Confidence 455666665543221111 0 1234578999999999999999999999965
No 51
>PRK13359 beta-ketoadipyl CoA thiolase; Provisional
Probab=99.79 E-value=1.2e-18 Score=154.42 Aligned_cols=192 Identities=18% Similarity=0.138 Sum_probs=136.3
Q ss_pred HHHHHHHHHHHHH-HCCCCCCCCCCCCeEEEEccCCCCccccccCccccchhhHhhhhhhhHHHHHHHHcCCCC--CCcc
Q psy4744 52 VRCFIEPCFEAIL-DAGINPKSLAGSNSSVYTNSCISDDESLGCDERLTTNFWLLAHVRCLLANRIAYLFDLKG--PSFT 128 (270)
Q Consensus 52 ~~l~l~a~~~Al~-dAg~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl~G--p~~~ 128 (270)
..|+.++++++|+ ++|+++++|| .||+|+...... ....++..++...|+.. |.++
T Consensus 27 ~~L~~~a~~~al~r~a~i~~~~Id----~vi~G~~~~~~~-----------------~g~~~ar~~~l~~Gl~~~vp~~t 85 (400)
T PRK13359 27 DDLGAVPLKALVERNPDVDWAAID----DVIYGCANQAGE-----------------DNRNVARMSLLLAGLPHGVPGST 85 (400)
T ss_pred HHHHHHHHHHHHHhccCCCHHHCC----EEEEEecccccc-----------------ccccHHHHHHHHcCCCCCCceEE
Confidence 4688889999999 4799999998 566665432110 01245667888889854 9999
Q ss_pred ccccchhHHHHHHHHHHHHhcCCCCEEEEeeeccccCchhH-----Hhh---------------------hcCc-c----
Q psy4744 129 IDNSWTGGIEVLRQAVQDISEGRVDTAIVGVSNLLLNANLN-----SLF---------------------QGLN-R---- 177 (270)
Q Consensus 129 v~~~cas~~~al~~A~~~i~~G~~d~~lv~g~~~~~~~~~~-----~~~---------------------~~~~-~---- 177 (270)
|+++|+||+.|+..|++.|++|++|++|++|+|.+...... ..+ ..+. .
T Consensus 86 V~~~CaSG~~Av~~A~~~I~sG~~divlagGvEsmS~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mg~ 165 (400)
T PRK13359 86 INRLCGSGMDAVGVAARAIKSGEAALMIAGGVESMSRAPFVMGKAESAFSRQAEIFDTTIGWRFVNPLMKQLYGVDSMPE 165 (400)
T ss_pred EeccchhHHHHHHHHHHHHHcCCCCEEEEeeeeccCCCccccccccccccCCcccccccccccccCCccccccccCCHHH
Confidence 99999999999999999999999999999999987653210 000 0000 0
Q ss_pred ----------cC-------------------CCC-------------------------CCcc------------cCCC-
Q psy4744 178 ----------LS-------------------PDG-------------------------KTRS------------FDHL- 190 (270)
Q Consensus 178 ----------ls-------------------~~~-------------------------~~~p------------fd~~- 190 (270)
++ +.+ ..|| |+.+
T Consensus 166 ~ae~~a~~~gisre~~d~~a~~Sh~~a~~a~~~g~~~~ei~pv~~~~~~~~~~~~~~De~~r~~t~e~l~~l~p~f~~~g 245 (400)
T PRK13359 166 TAENVATDYNVSRADQDAFALRSQQKAARAQADGTLAQEIVPVTIPQKKGDPLVVSRDEHPRETTLEALAKLKGVVRPDG 245 (400)
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhcCCCccceeeeeeccCCCCceeecCCCCCCCCCHHHHhcCCCccCCCC
Confidence 00 000 0011 2211
Q ss_pred ----CCceeecCeeEEEEecChHHHHhhcCceEeEEEeccCCCCCCCcCCCHHHHHHHHHHHHHHcCCCCCCccEEEccc
Q psy4744 191 ----ANGYARSEGIVVLLLQRSETALRSYGEVLHAESRFYGSLERPFVGFNQASLVEFFTNFYQKARVNPGQVDFLEADG 266 (270)
Q Consensus 191 ----~~g~~~geGA~alvL~~~~~A~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~agi~~~did~v~~hg 266 (270)
.+...++|||+++||++++.|+++ +..+++++.+++.... ...+...+...+++++|+++|++|+|||+||.|-
T Consensus 246 ~lT~~n~~~~~DGAaa~vL~s~e~A~~~-g~~~~a~I~g~~~~~~-~p~~~~~~~~~A~~~al~~AGl~~~DID~iei~d 323 (400)
T PRK13359 246 TVTAGNASGVNDGACALLLASEAAARRH-GLKPRARVLGIATAGV-EPRVMGIGPAPATQKLLARLGMTLDQFDVIELNE 323 (400)
T ss_pred ceecccccCccCceEEEEEecHHHHHHC-CCCccEEEEEEEEecC-CCCccchhHHHHHHHHHHHhCCCHHHcCcCccCc
Confidence 112247999999999999999987 7778888888876421 1233445678999999999999999999999884
No 52
>TIGR02430 pcaF beta-ketoadipyl CoA thiolase. Members of this family are designated beta-ketoadipyl CoA thiolase, an enzyme that acts at the end of pathways for the degradation of protocatechuate (from benzoate and related compounds) and of phenylacetic acid.
Probab=99.79 E-value=9.9e-19 Score=154.88 Aligned_cols=192 Identities=18% Similarity=0.141 Sum_probs=134.9
Q ss_pred HHHHHHHHHHHHH-HCCCCCCCCCCCCeEEEEccCCCCccccccCccccchhhHhhhhhhhHHHHHHHHcCCC--CCCcc
Q psy4744 52 VRCFIEPCFEAIL-DAGINPKSLAGSNSSVYTNSCISDDESLGCDERLTTNFWLLAHVRCLLANRIAYLFDLK--GPSFT 128 (270)
Q Consensus 52 ~~l~l~a~~~Al~-dAg~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl~--Gp~~~ 128 (270)
..|+.++++++|+ ++|+++++|+ .|++|+...... ....++..++...|+. -|+++
T Consensus 26 ~~L~~~a~~~al~~~a~i~~~~Id----~v~~G~~~~~~~-----------------~~~~~ar~~~~~~Gl~~~~p~~~ 84 (400)
T TIGR02430 26 DDLAAVPIKALLARNPQLDWAAID----DVIYGCANQAGE-----------------DNRNVARMAALLAGLPVSVPGTT 84 (400)
T ss_pred HHHHHHHHHHHHHhccCCCHHHCC----EEEEEecccccc-----------------ccccHHHHHHHHcCCCCCCceEE
Confidence 5788999999999 6899998888 577775432110 0123555688899995 48999
Q ss_pred ccccchhHHHHHHHHHHHHhcCCCCEEEEeeeccccCchhH-------Hh-----h--------------hcCc---c--
Q psy4744 129 IDNSWTGGIEVLRQAVQDISEGRVDTAIVGVSNLLLNANLN-------SL-----F--------------QGLN---R-- 177 (270)
Q Consensus 129 v~~~cas~~~al~~A~~~i~~G~~d~~lv~g~~~~~~~~~~-------~~-----~--------------~~~~---~-- 177 (270)
|+++|+||+.|+..|++.|++|++|++||+|+|.+...... .. . .... +
T Consensus 85 V~~~CaSG~~Ai~~a~~~I~sG~~d~~la~G~E~ms~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~M~~ 164 (400)
T TIGR02430 85 VNRLCGSGLDAIGMAARAIKAGEADLLIAGGVESMSRAPFVMGKADSAFSRSAKIEDTTIGWRFINPLMKALYGVDSMPE 164 (400)
T ss_pred eechhhhHHHHHHHHHHHHHCCCCCEEEEeccccccCCcccccccccccccccccccccccccccCcccccccccCcHHH
Confidence 99999999999999999999999999999999987643210 00 0 0000 0
Q ss_pred ----------cCC-----------------------------------CC---CCcccCCC-------------------
Q psy4744 178 ----------LSP-----------------------------------DG---KTRSFDHL------------------- 190 (270)
Q Consensus 178 ----------ls~-----------------------------------~~---~~~pfd~~------------------- 190 (270)
++. .+ ..+|...-
T Consensus 165 ~ae~~a~~ygisre~~d~~A~~Sh~~a~~a~~~g~~~~ei~pv~vk~~~~~~~~~n~da~~r~~~t~e~l~~~~~v~~p~ 244 (400)
T TIGR02430 165 TAENVAEEFGISREDQDAFALRSQQRTAAAQASGFFAEEIVPVVIPQKKGEPTVVDQDEHPRPETTLEGLAKLKPVVRPD 244 (400)
T ss_pred HHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHcCCCcceEEEEEeccCCCCceeeCCCCccCCCCCHHHHhcCCCcccCC
Confidence 000 00 01111111
Q ss_pred -----CCceeecCeeEEEEecChHHHHhhcCceEeEEEeccCCCCCCCcCCCHHHHHHHHHHHHHHcCCCCCCccEEEcc
Q psy4744 191 -----ANGYARSEGIVVLLLQRSETALRSYGEVLHAESRFYGSLERPFVGFNQASLVEFFTNFYQKARVNPGQVDFLEAD 265 (270)
Q Consensus 191 -----~~g~~~geGA~alvL~~~~~A~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~agi~~~did~v~~h 265 (270)
.+...++|||+++||++++.|+++ +..+.+++.+++..... ..+...+...+++++|+++|++|+|||++|.|
T Consensus 245 g~lt~~~~s~~~DGAaa~vl~s~e~A~~~-g~~~~~~I~g~~~~~~~-~~~~~~~~~~a~~~al~~Agl~~~DID~~ei~ 322 (400)
T TIGR02430 245 GTVTAGNASGVNDGAAALLLASEEAVQRH-GLTPRARILAAATAGVE-PRIMGIGPVPATQKLLARAGLSIDQFDVIELN 322 (400)
T ss_pred CCEeccccCCcCCceEEEEEecHHHHHHC-CCCccEEEEEEEEecCC-CccccchHHHHHHHHHHHhCCCHHHCCCcccC
Confidence 112246999999999999999987 76777788887654321 22233467899999999999999999999988
Q ss_pred c
Q psy4744 266 G 266 (270)
Q Consensus 266 g 266 (270)
-
T Consensus 323 D 323 (400)
T TIGR02430 323 E 323 (400)
T ss_pred c
Confidence 5
No 53
>PRK06445 acetyl-CoA acetyltransferase; Provisional
Probab=99.79 E-value=3e-18 Score=152.22 Aligned_cols=196 Identities=14% Similarity=0.138 Sum_probs=132.7
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCeEEEEccCCCCccccccCccccchhhHhhhhhhhHHHHHHHHcCCCCCCcccc
Q psy4744 51 LVRCFIEPCFEAILDAGINPKSLAGSNSSVYTNSCISDDESLGCDERLTTNFWLLAHVRCLLANRIAYLFDLKGPSFTID 130 (270)
Q Consensus 51 ~~~l~l~a~~~Al~dAg~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl~Gp~~~v~ 130 (270)
...|+.+++++||+|+|+++++|+ .+++|+...+.... . .......+...++.+-|+++|+
T Consensus 32 ~~~L~~~a~~~AL~~agl~~~dID----~vi~g~~~~~~~~~---------~------~~~~~~~l~a~~~~~~p~~~V~ 92 (394)
T PRK06445 32 PEELAAMLINRLIEKTGIKPEEID----DIITGCALQVGENW---------L------YGGRHPIFLARLPYNIPAMAVD 92 (394)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC----eeEEEeecCCCccc---------c------cHHHHHHHHcCCCCCCcchhhh
Confidence 467999999999999999999998 56777654321100 0 0001111233334445899999
Q ss_pred ccchhHHHHHHHHHHHHhcCCCCEEEEeeeccccCch-----------hHH---h---hhc-----Cccc----------
Q psy4744 131 NSWTGGIEVLRQAVQDISEGRVDTAIVGVSNLLLNAN-----------LNS---L---FQG-----LNRL---------- 178 (270)
Q Consensus 131 ~~cas~~~al~~A~~~i~~G~~d~~lv~g~~~~~~~~-----------~~~---~---~~~-----~~~l---------- 178 (270)
++|+|++.++..|+++|++|.+|++||+|+|.+.... ... . +.. ++..
T Consensus 93 ~~CaSg~~ai~~A~~~I~sG~~d~vLv~G~e~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~a~~~~~~ygi 172 (394)
T PRK06445 93 RQCASSLTTVSIGAMEIATGMADIVIAGGVEHMTRTPMGDNPHIEPNPKLLTDPKYIEYDLTTGYVMGLTAEKLAEEAGI 172 (394)
T ss_pred hhhHHHHHHHHHHHHHHHcCCCCEEEEeeecccccCccccCccccCChhhccccccCcccccCCCCHHHHHHHHHHHhCC
Confidence 9999999999999999999999999999999654211 000 0 000 0000
Q ss_pred C-------------------CCCC------------------CcccCCCC------------------------Cceeec
Q psy4744 179 S-------------------PDGK------------------TRSFDHLA------------------------NGYARS 197 (270)
Q Consensus 179 s-------------------~~~~------------------~~pfd~~~------------------------~g~~~g 197 (270)
+ +++. .+|....+ +...++
T Consensus 173 tre~~a~va~~sh~~A~~a~~~g~~~~ei~p~~~~~~~~~~~~npda~~r~~~t~e~~~~~~~v~~~~g~lt~~~~~~~~ 252 (394)
T PRK06445 173 KREEMDRWSLRSHQLAAKAIQEGYFKDEILPIEVEVEGKKKVVDVDQSVRPDTSLEKLAKLPPAFKPDGVITAGNSSPLN 252 (394)
T ss_pred CHHHHHHHHHHHHHHHHHHHHcCCCcceEeEEEecCCCCceeeCCCCCCCCCCCHHHHhcCCCccCCCCcEecCcCCCCC
Confidence 0 0000 02221111 133569
Q ss_pred CeeEEEEecChHHHHhhcCceEeEEEeccCCCCCCCcCCCHHHHHHHHHHHHHHcCCCCCCccEEEcccC
Q psy4744 198 EGIVVLLLQRSETALRSYGEVLHAESRFYGSLERPFVGFNQASLVEFFTNFYQKARVNPGQVDFLEADGS 267 (270)
Q Consensus 198 eGA~alvL~~~~~A~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~agi~~~did~v~~hgt 267 (270)
|||+++||++++.|+++ +..+.+++.+++..... ..+...+...+++++|+++|++|+||||+|+|-.
T Consensus 253 DGAaavvl~s~~~A~~~-~~~~~a~i~g~~~~~~~-~~~~~~~~~~a~~~al~~Agl~~~dId~~e~~d~ 320 (394)
T PRK06445 253 SGASYVLLMSKKAVKKY-GLKPMAKIRSFGFAGVP-PAIMGKGPVPASKKALEKAGLSVKDIDLWEINEA 320 (394)
T ss_pred CceEEEEEecHHHHHHC-CCCceEEEEEEEEeccC-CchhcchHHHHHHHHHHHcCCCHHHcCEEEeccc
Confidence 99999999999999886 77777888888865322 2223346789999999999999999999999964
No 54
>PRK06205 acetyl-CoA acetyltransferase; Provisional
Probab=99.79 E-value=1.1e-18 Score=155.47 Aligned_cols=192 Identities=15% Similarity=0.153 Sum_probs=134.7
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCeEEEEccCCCCccccccCccccchhhHhhhhhhhHHHHHHHHcCCC--CCCcc
Q psy4744 51 LVRCFIEPCFEAILDAGINPKSLAGSNSSVYTNSCISDDESLGCDERLTTNFWLLAHVRCLLANRIAYLFDLK--GPSFT 128 (270)
Q Consensus 51 ~~~l~l~a~~~Al~dAg~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl~--Gp~~~ 128 (270)
...|+.+|+++||+|+|+++++|| .|++|+....+. ...++..++..+|+. -|+++
T Consensus 26 ~~eLa~~A~~~AL~~agl~~~dID----~vv~g~~~~~~~------------------~~~~a~~va~~~Gl~~~~p~~~ 83 (404)
T PRK06205 26 AEELAATVIRALVERTGIDPARID----DVIFGQGYPNGE------------------APAIGRVAALDAGLPVTVPGMQ 83 (404)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC----EEEEEeccCCCC------------------CChHHHHHHHHcCCCCCCceee
Confidence 367899999999999999999988 678876554331 112344678888985 47899
Q ss_pred ccccchhHHHHHHHHHHHHhcCCCCEEEEeeeccccCchh----------------HHh------------hh-cCccc-
Q psy4744 129 IDNSWTGGIEVLRQAVQDISEGRVDTAIVGVSNLLLNANL----------------NSL------------FQ-GLNRL- 178 (270)
Q Consensus 129 v~~~cas~~~al~~A~~~i~~G~~d~~lv~g~~~~~~~~~----------------~~~------------~~-~~~~l- 178 (270)
|+.+|+|++.|+..|+++|++|++|++||+|+|.+..... ... +. ...+.
T Consensus 84 V~~~CaSg~~Al~~A~~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~ 163 (404)
T PRK06205 84 LDRRCGSGLQAVITAAMQVQTGAADVVIAGGAESMSNVEFYTTDMRWGVRGGGVQLHDRLARGRETAGGRRFPVPGGMIE 163 (404)
T ss_pred hhhhhhHHHHHHHHHHHHHHcCCCCEEEEeeehhhccCcccccccccccccCcchhhhhhccCcccccccccCCCCCHHH
Confidence 9999999999999999999999999999999987542110 000 00 00000
Q ss_pred -C--------------------------C---CCCC-------------------cccCC--------------------
Q psy4744 179 -S--------------------------P---DGKT-------------------RSFDH-------------------- 189 (270)
Q Consensus 179 -s--------------------------~---~~~~-------------------~pfd~-------------------- 189 (270)
. . .+.. .|...
T Consensus 164 ~a~~~~~~~gitre~~~~~Av~sh~~A~~a~~~g~~~~ei~pv~~~~~~~~~~~~~~da~~r~~~t~e~~~~~~~v~~~~ 243 (404)
T PRK06205 164 TAENLRREYGISREEQDALAVRSHQRAVAAQEAGRFDDEIVPVTVPQRKGDPTVVDRDEHPRADTTLESLAKLRPIMGKQ 243 (404)
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceeeeeEecCCCCCceEeccCCCCCCCCCHHHHhcCCCcCccC
Confidence 0 0 0000 11111
Q ss_pred -------CCCceeecCeeEEEEecChHHHHhhcCceEeEEEeccCCCCCCCcCCCHHHHHHHHHHHHHHcCCCCCCccEE
Q psy4744 190 -------LANGYARSEGIVVLLLQRSETALRSYGEVLHAESRFYGSLERPFVGFNQASLVEFFTNFYQKARVNPGQVDFL 262 (270)
Q Consensus 190 -------~~~g~~~geGA~alvL~~~~~A~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~agi~~~did~v 262 (270)
-.+...++|||+++||++++.|++. +..+.+++.+++...... .....+...+++++|++||++|+|||++
T Consensus 244 ~p~g~lt~~~~~~~~DGAaa~vl~se~~A~~~-~~~p~~~i~g~~~~~~~~-~~~~~~~~~a~~~al~~Agl~~~Did~~ 321 (404)
T PRK06205 244 DPEATVTAGNASGQNDAAAACLVTTEDKAEEL-GLRPLARLVSWAVAGVEP-SRMGIGPVPATEKALARAGLTLDDIDLI 321 (404)
T ss_pred CCCCceeCcccCCCCCceeEEEEecHHHHHHC-CCCceEEEEEEEEeccCC-ccccccHHHHHHHHHHHcCCCHHHCCEe
Confidence 1122245899999999999999876 767777777777543221 1122467899999999999999999999
Q ss_pred Eccc
Q psy4744 263 EADG 266 (270)
Q Consensus 263 ~~hg 266 (270)
|+|-
T Consensus 322 ei~d 325 (404)
T PRK06205 322 ELNE 325 (404)
T ss_pred eecc
Confidence 9984
No 55
>PRK07851 acetyl-CoA acetyltransferase; Provisional
Probab=99.78 E-value=4.4e-18 Score=151.49 Aligned_cols=193 Identities=15% Similarity=0.136 Sum_probs=133.7
Q ss_pred HHHHHHHHHHHHHHHC-CCCCCCCCCCCeEEEEccCCCCccccccCccccchhhHhhhhhhhHHHHHHHHcCCCC-CCcc
Q psy4744 51 LVRCFIEPCFEAILDA-GINPKSLAGSNSSVYTNSCISDDESLGCDERLTTNFWLLAHVRCLLANRIAYLFDLKG-PSFT 128 (270)
Q Consensus 51 ~~~l~l~a~~~Al~dA-g~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl~G-p~~~ 128 (270)
...|+.+++++||+|+ |+++++|| ++++|....... . ....+..++..+|+.+ |+++
T Consensus 27 ~~eL~~~A~~~AL~da~gl~~~dID----~vv~g~~~~~~~--------------~---g~~~~~~~a~~lGl~~~p~~~ 85 (406)
T PRK07851 27 PDDLAAQMVRAALDKVPALDPTDID----DLMLGCGLPGGE--------------Q---GFNMARVVAVLLGYDFLPGTT 85 (406)
T ss_pred HHHHHHHHHHHHHHhccCCCHHHCC----EEEEEccccccc--------------c---cCCHHHHHHHHcCCCCCCeee
Confidence 3679999999999997 99999998 677764321100 0 0123456888999965 8889
Q ss_pred ccccchhHHHHHHHHHHHHhcCCCCEEEEeeeccccCch-------------hHH---------------hh-hc-----
Q psy4744 129 IDNSWTGGIEVLRQAVQDISEGRVDTAIVGVSNLLLNAN-------------LNS---------------LF-QG----- 174 (270)
Q Consensus 129 v~~~cas~~~al~~A~~~i~~G~~d~~lv~g~~~~~~~~-------------~~~---------------~~-~~----- 174 (270)
|+.+|+||+.++..|+++|++|++|++||+|+|.+.... .+. .+ ..
T Consensus 86 v~~~caSG~~av~~Aa~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 165 (406)
T PRK07851 86 VNRYCSSSLQTTRMAFHAIKAGEGDVFISAGVETVSRFAKGNSDSLPDTKNPLFAEAQARTAARAEGGAEAWHDPREDGL 165 (406)
T ss_pred eeccchhHHHHHHHHHHHHHCCCCCEEEEeeEEecccCcccccccccccCchhhhhcccccccccccccccccccccccc
Confidence 999999999999999999999999999999988632210 000 00 00
Q ss_pred ----C-cc------------cC-------------------CCC--C--Ccc------------------cC--------
Q psy4744 175 ----L-NR------------LS-------------------PDG--K--TRS------------------FD-------- 188 (270)
Q Consensus 175 ----~-~~------------ls-------------------~~~--~--~~p------------------fd-------- 188 (270)
. .+ ++ .++ . ..| ++
T Consensus 166 ~~~~~~amg~~a~~~~~~yg~~re~~~~~a~~s~~~a~~A~~n~~~a~~~~p~~~p~~~~~~~d~~~r~~~t~e~v~~s~ 245 (406)
T PRK07851 166 LPDVYIAMGQTAENVAQLTGISREEQDEWGVRSQNRAEEAIANGFFEREITPVTLPDGTVVSTDDGPRAGTTYEKVSQLK 245 (406)
T ss_pred cccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCccceeeeecCCCceeCCCCCccCCcCHHHHhcCC
Confidence 0 00 00 000 0 001 10
Q ss_pred ----C-----CCCceeecCeeEEEEecChHHHHhhcCceEeEEEeccCCCCCCCcCCCHHHHHHHHHHHHHHcCCCCCCc
Q psy4744 189 ----H-----LANGYARSEGIVVLLLQRSETALRSYGEVLHAESRFYGSLERPFVGFNQASLVEFFTNFYQKARVNPGQV 259 (270)
Q Consensus 189 ----~-----~~~g~~~geGA~alvL~~~~~A~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~agi~~~di 259 (270)
. ..+...++|||+++||++++.|++. +..+.+++.+++...... .+...+...+++++|++||++|+||
T Consensus 246 ~v~~P~~~lt~~d~~~~~DGaaa~vl~s~e~A~~~-~~~~~a~I~g~~~~~~~~-~~~~~~~~~a~~~al~~Agi~~~di 323 (406)
T PRK07851 246 PVFRPDGTVTAGNACPLNDGAAAVVIMSDTKAREL-GLTPLARIVSTGVSGLSP-EIMGLGPVEASKQALARAGMSIDDI 323 (406)
T ss_pred CccCCCCcEecCcCCccCCceeEEEEccHHHHHHc-CCCccEEEEEEEEccCCC-CccchhHHHHHHHHHHHhCCCHHHC
Confidence 0 0122346999999999999999877 777778888887643221 2223357899999999999999999
Q ss_pred cEEEccc
Q psy4744 260 DFLEADG 266 (270)
Q Consensus 260 d~v~~hg 266 (270)
|++|.|-
T Consensus 324 d~~ei~d 330 (406)
T PRK07851 324 DLVEINE 330 (406)
T ss_pred Ceehhhh
Confidence 9999985
No 56
>PRK06954 acetyl-CoA acetyltransferase; Provisional
Probab=99.78 E-value=5.3e-18 Score=150.62 Aligned_cols=193 Identities=19% Similarity=0.201 Sum_probs=129.8
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCeEEEEccCCCCccccccCccccchhhHhhhhhhhHHHHHHHHcCC--CCCCcc
Q psy4744 51 LVRCFIEPCFEAILDAGINPKSLAGSNSSVYTNSCISDDESLGCDERLTTNFWLLAHVRCLLANRIAYLFDL--KGPSFT 128 (270)
Q Consensus 51 ~~~l~l~a~~~Al~dAg~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl--~Gp~~~ 128 (270)
...|+.+++++||+|+|+++++|+ .|++|+...... ...++...+..+|+ +-|+++
T Consensus 31 ~~eL~~~a~~~aL~~Agi~~~dID----~vi~G~~~~~~~------------------~~~~~~~~~l~ag~~~~~p~~~ 88 (397)
T PRK06954 31 APQLGAAAIAAAVERAGLKPEQID----EVVMGCVLPAGQ------------------GQAPARQAALGAGLPLSVGCTT 88 (397)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHcC----EEEEEecCCCcc------------------chHHHHHHHHcCCCCCCccEee
Confidence 367999999999999999999988 677876542211 01122233344555 247799
Q ss_pred ccccchhHHHHHHHHHHHHhcCCCCEEEEeeeccccCchh----------------HHhh--hcC-ccc-----------
Q psy4744 129 IDNSWTGGIEVLRQAVQDISEGRVDTAIVGVSNLLLNANL----------------NSLF--QGL-NRL----------- 178 (270)
Q Consensus 129 v~~~cas~~~al~~A~~~i~~G~~d~~lv~g~~~~~~~~~----------------~~~~--~~~-~~l----------- 178 (270)
|+.+|+||+.|+..|+++|++|++|++||+|+|.+..... ...+ ... ..+
T Consensus 89 V~~aCaSG~~Av~~A~~~I~sG~~d~vLv~G~E~ms~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 168 (397)
T PRK06954 89 VNKMCGSGMRAAMFAHDMLVAGSVDVIVAGGMESMTNAPYLLPKARGGMRMGHGQVLDHMFLDGLEDAYDKGRLMGTFAE 168 (397)
T ss_pred ccccchHHHHHHHHHHHHHHCCCCCEEEEEeeeccCCCcccCcccccccccCcchhhhhhcccccccccccCCCHHHHHH
Confidence 9999999999999999999999999999999997652110 0000 000 000
Q ss_pred --------C-------------------CCCCC----cccCCC-------------------------------------
Q psy4744 179 --------S-------------------PDGKT----RSFDHL------------------------------------- 190 (270)
Q Consensus 179 --------s-------------------~~~~~----~pfd~~------------------------------------- 190 (270)
+ +.+.. .|+...
T Consensus 169 ~~~~~ygitre~~d~~A~~s~~~a~~a~~~~~~~~~~~pv~v~~~~~~~~v~~D~~pr~~~~~~l~~l~~~f~~~g~lt~ 248 (397)
T PRK06954 169 ECAGEYGFTREAQDAFAIESLARAKRANEDGSFAWEIAPVTVAGKKGDTVIDRDEQPFKANPEKIPTLKPAFSKTGTVTA 248 (397)
T ss_pred HHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCCceEeeEEeccCCCCeEeccCCCcCCCCHHHHhCCCCccCCCCcEEc
Confidence 0 01000 122100
Q ss_pred CCceeecCeeEEEEecChHHHHhhcCceEeEEEeccCCCCCCCcCCCHHHHHHHHHHHHHHcCCCCCCccEEEcccC
Q psy4744 191 ANGYARSEGIVVLLLQRSETALRSYGEVLHAESRFYGSLERPFVGFNQASLVEFFTNFYQKARVNPGQVDFLEADGS 267 (270)
Q Consensus 191 ~~g~~~geGA~alvL~~~~~A~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~agi~~~did~v~~hgt 267 (270)
.+...++|||+++||++++.|+++ +..+.+++.+++..... ......+...+++++|+++||+|+|||++|+|-.
T Consensus 249 ~~~~~~~DGAaa~vl~s~~~a~~~-~~~p~~~i~g~~~~~~~-~~~~~~~~~~a~~~al~~agl~~~Did~~ei~d~ 323 (397)
T PRK06954 249 ANSSSISDGAAALVMMRASTAKRL-GLAPLARVVGHSTFAQA-PSKFTTAPVGAIRKLFEKNGWRAAEVDLFEINEA 323 (397)
T ss_pred cccCCCCCceEEEEEecHHHHHHC-CCCceEEEEEEEecccC-cccccchHHHHHHHHHHHcCCCHHHCCEEehhhH
Confidence 112346999999999999999887 76666667666543211 1112235678999999999999999999999854
No 57
>PRK08963 fadI 3-ketoacyl-CoA thiolase; Reviewed
Probab=99.78 E-value=3.1e-18 Score=153.41 Aligned_cols=193 Identities=13% Similarity=0.133 Sum_probs=133.7
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCCeEEEEccCCCCccccccCccccchhhHhhhhhhhHHHHHHHHcCCC--CCCccc
Q psy4744 52 VRCFIEPCFEAILDAGINPKSLAGSNSSVYTNSCISDDESLGCDERLTTNFWLLAHVRCLLANRIAYLFDLK--GPSFTI 129 (270)
Q Consensus 52 ~~l~l~a~~~Al~dAg~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl~--Gp~~~v 129 (270)
..|+.+++++||+|+|+++++|+ .|++|+...... ...++..++...|+. -|.++|
T Consensus 30 ~eL~~~a~~~al~~agl~~~~ID----~vi~G~~~~~~~------------------~~~~ar~~a~~aGl~~~~P~~tV 87 (428)
T PRK08963 30 VDLGKMVVGELLARSEIDPELIE----QLVFGQVVQMPE------------------APNIAREIVLGTGMNVHTDAYSV 87 (428)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC----EEEEeccCCCCC------------------ccHHHHHHHHHCCCCCCCcceee
Confidence 67889999999999999998888 677775432110 122455688889995 499999
Q ss_pred cccchhHHHHHHHHHHHHhcCCCCEEEEeeeccccCchhHH-------------------h------------h---hcC
Q psy4744 130 DNSWTGGIEVLRQAVQDISEGRVDTAIVGVSNLLLNANLNS-------------------L------------F---QGL 175 (270)
Q Consensus 130 ~~~cas~~~al~~A~~~i~~G~~d~~lv~g~~~~~~~~~~~-------------------~------------~---~~~ 175 (270)
+++|+||+.|+..|+++|++|++|++||+|+|.+....... . + ..+
T Consensus 88 ~~aCaSG~~Ai~~Aa~~I~sG~~dvvLvgG~Esms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (428)
T PRK08963 88 SRACATSFQAVANVAESIMAGTIDIGIAGGADSSSVLPIGVSKKLARALVDLNKARTLGQRLKLFSRLRLRDLLPVPPAV 167 (428)
T ss_pred hhhhHHHHHHHHHHHHHHHCCCCCEEEEecccccCCCccccccccccchhccccccccCcccccccccchhhccccCccc
Confidence 99999999999999999999999999999999765432100 0 0 000
Q ss_pred ---------ccc----------C-----------------C--CCC---------CcccCC-------C-----------
Q psy4744 176 ---------NRL----------S-----------------P--DGK---------TRSFDH-------L----------- 190 (270)
Q Consensus 176 ---------~~l----------s-----------------~--~~~---------~~pfd~-------~----------- 190 (270)
+.. + . ++. .+|+.. -
T Consensus 168 ~~~~~~~~m~~~A~~~~~~ygisre~~~~~avksh~~a~~~~~~g~~~~ei~p~~~~p~a~~~~~D~~~r~~~t~e~~~~ 247 (428)
T PRK08963 168 AEYSTGLRMGDTAEQMAKTYGISREEQDALAHRSHQLAAQAWAEGKLDDEVMTAHVPPYKQPLEEDNNIRGDSTLEDYAK 247 (428)
T ss_pred ccccCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccceeeEEecCCceeeCCCCCCCCCCCHHHHhc
Confidence 000 0 0 000 002210 0
Q ss_pred --------------CCceeecCeeEEEEecChHHHHhhcCceEeEEEeccCCCCCCCcCCCHHHHHHHHHHHHHHcCCCC
Q psy4744 191 --------------ANGYARSEGIVVLLLQRSETALRSYGEVLHAESRFYGSLERPFVGFNQASLVEFFTNFYQKARVNP 256 (270)
Q Consensus 191 --------------~~g~~~geGA~alvL~~~~~A~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~agi~~ 256 (270)
.+...++|||+++||++++.|++. +..+.+++.+++............+...+++++|+++|+++
T Consensus 248 ~~~v~~p~~g~lt~~~~~~~~DGAaA~vl~see~A~~l-~~~p~~~i~g~~~~~~~~~~~~~~~~~~a~~~al~~AGl~~ 326 (428)
T PRK08963 248 LRPAFDRKHGTVTAANSTPLTDGAAAVLLMSESRAKAL-GLTPLGYLRSYAFAAIDVWQDMLLGPAYATPLALERAGLTL 326 (428)
T ss_pred CCccccCCCCceehhhcCCCCCceEEEEEecHHHHHHc-CCCccEEEEEEecccCCchhhhhhHHHHHHHHHHHHcCCCH
Confidence 112246999999999999999876 66677777777654311100012345689999999999999
Q ss_pred CCccEEEcccC
Q psy4744 257 GQVDFLEADGS 267 (270)
Q Consensus 257 ~did~v~~hgt 267 (270)
+|||++|+|-.
T Consensus 327 ~DiD~~Ei~d~ 337 (428)
T PRK08963 327 ADLTLIDMHEA 337 (428)
T ss_pred HHCCEEEEccc
Confidence 99999999953
No 58
>PRK08235 acetyl-CoA acetyltransferase; Provisional
Probab=99.77 E-value=2.4e-18 Score=152.49 Aligned_cols=193 Identities=13% Similarity=0.099 Sum_probs=131.9
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCeEEEEccCCCCccccccCccccchhhHhhhhhhhHHHHHHHHcCCC--CCCcc
Q psy4744 51 LVRCFIEPCFEAILDAGINPKSLAGSNSSVYTNSCISDDESLGCDERLTTNFWLLAHVRCLLANRIAYLFDLK--GPSFT 128 (270)
Q Consensus 51 ~~~l~l~a~~~Al~dAg~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl~--Gp~~~ 128 (270)
...|+.+|+++||+|+|+++++|| .|++|+...... ...++..++..+|+. -|+++
T Consensus 26 ~~eLa~~A~~~aL~~agl~~~dID----~vi~g~~~~~~~------------------~~~~~~~~~~~~Gl~~~~p~~~ 83 (393)
T PRK08235 26 ATELGGIAIKEALERANVSAEDVE----EVIMGTVLQGGQ------------------GQIPSRQAARAAGIPWEVQTET 83 (393)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC----EEEEEecccCCC------------------CCCHHHHHHHHcCCCCCcceee
Confidence 367999999999999999999988 677776543110 012333467788984 48999
Q ss_pred ccccchhHHHHHHHHHHHHhcCCCCEEEEeeeccccCchhHH---------------------h-hhcC-cc-c------
Q psy4744 129 IDNSWTGGIEVLRQAVQDISEGRVDTAIVGVSNLLLNANLNS---------------------L-FQGL-NR-L------ 178 (270)
Q Consensus 129 v~~~cas~~~al~~A~~~i~~G~~d~~lv~g~~~~~~~~~~~---------------------~-~~~~-~~-l------ 178 (270)
|+++|+||+.||..|++.|++|++|++||+|+|.+....... . .... +. +
T Consensus 84 V~~~CaSg~~Al~~A~~~I~sG~~d~vLvvG~E~ms~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~ 163 (393)
T PRK08235 84 VNKVCASGLRAVTLADQIIRAGDASVIVAGGMESMSNAPYILPGARWGYRMGDNEVIDLMVADGLTCAFSGVHMGVYGGE 163 (393)
T ss_pred hhhhhhHHHHHHHHHHHHHHCCCCCEEEEEeeeccccCcccccccccccccCCchhhhhhcccccccccCCCCHHHHHHH
Confidence 999999999999999999999999999999999765422100 0 0000 00 0
Q ss_pred -------C----------------C---CCC-------------------CcccCCCC----------------------
Q psy4744 179 -------S----------------P---DGK-------------------TRSFDHLA---------------------- 191 (270)
Q Consensus 179 -------s----------------~---~~~-------------------~~pfd~~~---------------------- 191 (270)
+ . .+. ..|...-|
T Consensus 164 ~~~~ygitre~~d~~avksh~~a~~a~~~g~~~~ei~pv~~~~~~~~~~~~~~da~~r~~~t~e~~~~~~~v~~p~g~lt 243 (393)
T PRK08235 164 VAKELGISREAQDEWAYRSHQRAVSAHEEGRFEEEIVPVTIPQRKGDPIVVAKDEAPRKDTTIEKLAKLKPVFDKTGTIT 243 (393)
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHHHcCCCCceEeeeEecCCCCCceEeCCCCCCCCCCCHHHHhcCCCcccCCCcEe
Confidence 0 0 000 01222111
Q ss_pred --CceeecCeeEEEEecChHHHHhhcCceEeEEEeccCCCCCCCcCCCHHHHHHHHHHHHHHcCCCCCCccEEEcccC
Q psy4744 192 --NGYARSEGIVVLLLQRSETALRSYGEVLHAESRFYGSLERPFVGFNQASLVEFFTNFYQKARVNPGQVDFLEADGS 267 (270)
Q Consensus 192 --~g~~~geGA~alvL~~~~~A~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~agi~~~did~v~~hgt 267 (270)
+...++|||+++||++++.|++. +..+.+++.+.+........ .......+++++|+++|++|+|||++|+|-.
T Consensus 244 ~~~~~~~~DGAaa~vl~s~~~A~~~-~~~p~~~i~g~~~~~~~~~~-~~~~~~~a~~~al~~agl~~~did~~e~~d~ 319 (393)
T PRK08235 244 AGNAPGVNDGAAALVLMSEDRAKQE-GRKPLATILAHTAIAVEAKD-FPRTPGYAINALLEKTGKTVEDIDLFEINEA 319 (393)
T ss_pred ccccCCCCCceEEEEEecHHHHHHC-CCCceEEEEEEEecccChhh-hcchHHHHHHHHHHHhCCCHHHCCeehhcch
Confidence 22246999999999999999876 66666667665543211111 1123468999999999999999999999853
No 59
>PRK09050 beta-ketoadipyl CoA thiolase; Validated
Probab=99.77 E-value=1.9e-18 Score=153.22 Aligned_cols=193 Identities=18% Similarity=0.173 Sum_probs=135.0
Q ss_pred HHHHHHHHHHHHHH-HCCCCCCCCCCCCeEEEEccCCCCccccccCccccchhhHhhhhhhhHHHHHHHHcCCC--CCCc
Q psy4744 51 LVRCFIEPCFEAIL-DAGINPKSLAGSNSSVYTNSCISDDESLGCDERLTTNFWLLAHVRCLLANRIAYLFDLK--GPSF 127 (270)
Q Consensus 51 ~~~l~l~a~~~Al~-dAg~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl~--Gp~~ 127 (270)
...|+.++++++|+ ++|+++++|+ .|++|+...... ...+++..++...|+. -|++
T Consensus 26 ~~~L~~~a~~~al~~~agi~~~~Id----~v~~G~~~~~~~-----------------~~~~~ar~~~~~~Gl~~~vP~~ 84 (401)
T PRK09050 26 ADDLGAVPLKALMARNPGVDWEAVD----DVIYGCANQAGE-----------------DNRNVARMSALLAGLPVSVPGT 84 (401)
T ss_pred HHHHHHHHHHHHHHhccCCCHHHCC----EEEEEecccccc-----------------ccchHHHHHHHHcCCCCCCceE
Confidence 35788999999999 6899998888 577775432110 0123555688889993 4999
Q ss_pred cccccchhHHHHHHHHHHHHhcCCCCEEEEeeeccccCchhH-----Hhh-------h-------------c-Cc-----
Q psy4744 128 TIDNSWTGGIEVLRQAVQDISEGRVDTAIVGVSNLLLNANLN-----SLF-------Q-------------G-LN----- 176 (270)
Q Consensus 128 ~v~~~cas~~~al~~A~~~i~~G~~d~~lv~g~~~~~~~~~~-----~~~-------~-------------~-~~----- 176 (270)
+|+++|+||+.|+..|++.|++|++|++||+|+|.+...... ..+ . . +.
T Consensus 85 tV~~aCaSG~~Ai~~A~~~I~sG~~dvvlagGvEsmS~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Mg 164 (401)
T PRK09050 85 TINRLCGSGMDAVGTAARAIKAGEAELMIAGGVESMSRAPFVMGKADSAFSRQAEIFDTTIGWRFVNPLMKAQYGVDSMP 164 (401)
T ss_pred EEecccccHHHHHHHHHHHHHCCCCCEEEEecccccccCcccccchhhhcccCcccccccccccccCCccccccccccHH
Confidence 999999999999999999999999999999999986543210 000 0 0 00
Q ss_pred c----------cC---------------------C-----------------------CCCCc------------c-cCC
Q psy4744 177 R----------LS---------------------P-----------------------DGKTR------------S-FDH 189 (270)
Q Consensus 177 ~----------ls---------------------~-----------------------~~~~~------------p-fd~ 189 (270)
. ++ + +...| | |+.
T Consensus 165 ~~ae~~a~~~gisre~~D~~A~~S~k~a~~A~~ng~~~~ei~p~~~~~~~~~~~~~~~da~~r~~~t~e~l~~l~~~~~~ 244 (401)
T PRK09050 165 ETAENVAEDYNISRADQDAFALRSQQRAAAAQAAGFLAEEIVPVTIPQKKGDPVVVDRDEHPRPETTLEALAKLKPVFRP 244 (401)
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceeeeeeeccCCCCceeeCCCCCCCCCCCHHHHhcCCCcccC
Confidence 0 00 0 11111 1 111
Q ss_pred -----CCCceeecCeeEEEEecChHHHHhhcCceEeEEEeccCCCCCCCcCCCHHHHHHHHHHHHHHcCCCCCCccEEEc
Q psy4744 190 -----LANGYARSEGIVVLLLQRSETALRSYGEVLHAESRFYGSLERPFVGFNQASLVEFFTNFYQKARVNPGQVDFLEA 264 (270)
Q Consensus 190 -----~~~g~~~geGA~alvL~~~~~A~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~agi~~~did~v~~ 264 (270)
-.+...++|||+++||++++.|+++ +..+.+++.+++...... .....+...+++++|+++|++|+|||++|.
T Consensus 245 ~g~lt~~n~s~~~DGAaa~vl~s~~~A~~l-g~~p~a~I~g~~~~~~~~-~~~~~~~~~a~~~al~~Agl~~~DId~~ei 322 (401)
T PRK09050 245 DGTVTAGNASGVNDGAAALLLASEAAAKKH-GLTPRARILGMATAGVEP-RIMGIGPAPATRKLLARLGLTIDQFDVIEL 322 (401)
T ss_pred CCEEeCCCcCCCcCceEEEEEecHHHHHHC-CCCccEEEEEEEEeccCC-ccccchHHHHHHHHHHHcCCCHHHCCcccc
Confidence 0122247999999999999999877 767777777777543221 112335689999999999999999999998
Q ss_pred cc
Q psy4744 265 DG 266 (270)
Q Consensus 265 hg 266 (270)
|-
T Consensus 323 ~D 324 (401)
T PRK09050 323 NE 324 (401)
T ss_pred Cc
Confidence 84
No 60
>PRK07850 acetyl-CoA acetyltransferase; Provisional
Probab=99.77 E-value=6.6e-18 Score=149.34 Aligned_cols=193 Identities=15% Similarity=0.126 Sum_probs=132.6
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCCeEEEEccCCCCccccccCccccchhhHhhhhhhhHHHHHHHHcCCC--CCCccc
Q psy4744 52 VRCFIEPCFEAILDAGINPKSLAGSNSSVYTNSCISDDESLGCDERLTTNFWLLAHVRCLLANRIAYLFDLK--GPSFTI 129 (270)
Q Consensus 52 ~~l~l~a~~~Al~dAg~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl~--Gp~~~v 129 (270)
..|+.++++++|+|+|+++.+|+ .|++|+...... ....++..++...|+. -|+++|
T Consensus 27 ~eL~~~a~~~aL~~agi~~~~Id----~v~~G~~~~~~~-----------------q~~~~ar~~~l~~Gl~~~~p~~tV 85 (387)
T PRK07850 27 AELLGAVQRAVLDRAGIDPGDVE----QVIGGCVTQAGE-----------------QSNNITRTAWLHAGLPYHVGATTI 85 (387)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC----EEEEEecccccc-----------------ccchHHHHHHHhCCCCCCCceEEE
Confidence 67899999999999999998888 577775431110 0012344556668885 488999
Q ss_pred cccchhHHHHHHHHHHHHhcCCCCEEEEeeeccccCchhH-H---hhh-------cCccc---------------C----
Q psy4744 130 DNSWTGGIEVLRQAVQDISEGRVDTAIVGVSNLLLNANLN-S---LFQ-------GLNRL---------------S---- 179 (270)
Q Consensus 130 ~~~cas~~~al~~A~~~i~~G~~d~~lv~g~~~~~~~~~~-~---~~~-------~~~~l---------------s---- 179 (270)
+++|+||+.|+..|++.|++|++|++||+|+|.+...... . .+. ..... +
T Consensus 86 ~~~CaSG~~A~~~A~~~I~sG~~dvvla~G~E~mS~~p~~~~~~~~~~~~~~~~~~~~~~~m~~~ae~~~~~ygisre~~ 165 (387)
T PRK07850 86 DCQCGSAQQANHLVAGLIAAGAIDVGIACGVEAMSRVPLGANAGPGRGLPRPDSWDIDMPNQFEAAERIAKRRGITREDV 165 (387)
T ss_pred ecccccHHHHHHHHHHHHHCCCCCEEEEEeEecCCCCcccccccccccCccccccccCcchHHHHHHHHHHHhCCCHHHH
Confidence 9999999999999999999999999999999987653210 0 000 00000 0
Q ss_pred -------------------------C-------C-----CC---------------------CcccCC----CCCceeec
Q psy4744 180 -------------------------P-------D-----GK---------------------TRSFDH----LANGYARS 197 (270)
Q Consensus 180 -------------------------~-------~-----~~---------------------~~pfd~----~~~g~~~g 197 (270)
| + .. ...|.. -.+...++
T Consensus 166 d~~a~~sh~~a~~A~~~g~f~~ei~pv~~~~~~~~~np~~~~~~~~~D~~~r~~t~e~l~~l~p~~~~~~~t~~~~~~~s 245 (387)
T PRK07850 166 DAFGLRSQRRAAQAWAEGRFDREISPVQAPVLDEEGQPTGETRLVTRDQGLRDTTMEGLAGLKPVLEGGIHTAGTSSQIS 245 (387)
T ss_pred HHHHHHHHHHHHHHHHcCCCcceeeeEeecccccccccCCCceEeecCCCcccCCHHHhccCCCCCCCCCccchhcCCcC
Confidence 0 0 00 011210 01333578
Q ss_pred CeeEEEEecChHHHHhhcCceEeEEEeccCCCCCCCcCCCHHHHHHHHHHHHHHcCCCCCCccEEEcccC
Q psy4744 198 EGIVVLLLQRSETALRSYGEVLHAESRFYGSLERPFVGFNQASLVEFFTNFYQKARVNPGQVDFLEADGS 267 (270)
Q Consensus 198 eGA~alvL~~~~~A~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~agi~~~did~v~~hgt 267 (270)
|||+++||.+++.|++. +..+.+++.+++..... ......+...+++++|+++|++|+|||++|+|-.
T Consensus 246 DGAaa~vl~see~A~~l-~~~p~~~i~g~~~~~~~-~~~~~~~~~~a~~~al~~agl~~~did~~ei~d~ 313 (387)
T PRK07850 246 DGAAAVLWMDEDRARAL-GLRPRARIVAQALVGAE-PYYHLDGPVQATAKVLEKAGMKIGDIDLVEINEA 313 (387)
T ss_pred CceEEEEEecHHHHHHc-CCCCcEEEEEEEEeccC-chhhcchHHHHHHHHHHHcCCCHHHcCeeeeccc
Confidence 99999999999999876 65666777776643211 1122355689999999999999999999999853
No 61
>PRK08170 acetyl-CoA acetyltransferase; Provisional
Probab=99.77 E-value=9.7e-18 Score=150.24 Aligned_cols=192 Identities=16% Similarity=0.155 Sum_probs=132.4
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCeEEEEccCCCCccccccCccccchhhHhhhhhhhHHHHHHHHcCCC--CCCcc
Q psy4744 51 LVRCFIEPCFEAILDAGINPKSLAGSNSSVYTNSCISDDESLGCDERLTTNFWLLAHVRCLLANRIAYLFDLK--GPSFT 128 (270)
Q Consensus 51 ~~~l~l~a~~~Al~dAg~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl~--Gp~~~ 128 (270)
...|+.+|+++||+|+|+++++|| +|++|+...... ...++..++..+|+. -|.++
T Consensus 27 ~~~L~~~A~~~Al~dAgl~~~dID----~vi~g~~~~~~~------------------~~~~a~~v~~~lGl~~~~p~~~ 84 (426)
T PRK08170 27 ASDLAVAAGRALLNRQPFAPDDLD----EVILGCAMPSPD------------------EANIARVVALRLGCGEKVPAWT 84 (426)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC----EEEEEeccCCCC------------------cChHHHHHHHHhCcCCCceeee
Confidence 467999999999999999999988 677775532110 013455678899994 39999
Q ss_pred ccccchhHHHHHHHHHHHHhcCCCCEEEEeeeccccCchh----------------------H-------Hhhhc-----
Q psy4744 129 IDNSWTGGIEVLRQAVQDISEGRVDTAIVGVSNLLLNANL----------------------N-------SLFQG----- 174 (270)
Q Consensus 129 v~~~cas~~~al~~A~~~i~~G~~d~~lv~g~~~~~~~~~----------------------~-------~~~~~----- 174 (270)
|+.+|+|++.+|..|+++|++|++|++||+|+|.+..... . ..+..
T Consensus 85 v~~~CaSg~~al~~A~~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (426)
T PRK08170 85 VQRNCASGMQALDSAAANIALGRADLVLAGGVEAMSHAPLLFSEKMVRWLAGWYAAKSIGQKLAALGKLRPSYLAPVIGL 164 (426)
T ss_pred ccchhhHHHHHHHHHHHHHHCCCCCEEEEEEEecccCCccccccccccchhccccccccCcccccccccccccccccccc
Confidence 9999999999999999999999999999999996443110 0 00000
Q ss_pred -Cccc------C---------------------------CCCCC------------------cccCCC------------
Q psy4744 175 -LNRL------S---------------------------PDGKT------------------RSFDHL------------ 190 (270)
Q Consensus 175 -~~~l------s---------------------------~~~~~------------------~pfd~~------------ 190 (270)
.+.. . .+... +|+++|
T Consensus 165 ~~g~~~~~~~~~~a~~a~~~~~~ygitre~~a~vav~s~~~a~~A~~~g~~~~i~pv~~~~~np~a~de~~r~~~t~e~~ 244 (426)
T PRK08170 165 LRGLTDPVVGLNMGQTAEVLAHRFGITREQMDAYAARSHQRLAAAQAEGRLKEVVPLFDRDGKFYDHDDGVRPDSSMEKL 244 (426)
T ss_pred CccccccccCcCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCcceEeeeecCCCCeeccCCCCCCCCCHHHH
Confidence 0000 0 00000 233221
Q ss_pred ----------------CCceeecCeeEEEEecChHHHHhhcCceEeEEEeccCCCCCCCcCCCHHHHHHHHHHHHHHcCC
Q psy4744 191 ----------------ANGYARSEGIVVLLLQRSETALRSYGEVLHAESRFYGSLERPFVGFNQASLVEFFTNFYQKARV 254 (270)
Q Consensus 191 ----------------~~g~~~geGA~alvL~~~~~A~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~agi 254 (270)
.+...++|||+++||++++.|++. +..+.+++.+++....... ....+...+++++|+++||
T Consensus 245 ~~~~~v~~~p~~~lt~~~~s~~~DGAaA~vl~s~e~A~~~-~~~p~~~i~~~~~~~~~~~-~~~~~~~~a~~~al~~aGl 322 (426)
T PRK08170 245 AKLKPFFDRPYGRVTAGNSSQITDGACWLLLASEEAVKKY-GLPPLGRIVDSQWAALDPS-QMGLGPVHAATPLLQRHGL 322 (426)
T ss_pred hcCCCcccCCCCCEeccccCCCCCceEEEEEecHHHHHHC-CCCceEEEEEeeEeeeCch-hhcccHHHHHHHHHHHcCC
Confidence 222346899999999999999876 5555556666654321111 1123467899999999999
Q ss_pred CCCCccEEEccc
Q psy4744 255 NPGQVDFLEADG 266 (270)
Q Consensus 255 ~~~did~v~~hg 266 (270)
+|+|||++|+|-
T Consensus 323 ~~~did~~ei~d 334 (426)
T PRK08170 323 TLEDLDLWEINE 334 (426)
T ss_pred CHHHcCEEEecc
Confidence 999999999984
No 62
>PRK09352 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=99.77 E-value=9.1e-18 Score=145.60 Aligned_cols=174 Identities=18% Similarity=0.162 Sum_probs=125.7
Q ss_pred hHHHHHHHHHHHHHHHCCCCCCCCCCCCeEEEEccCCCCccccccCccccchhhHhhhhhhhHHHHHHHHcCCCC-CCcc
Q psy4744 50 PLVRCFIEPCFEAILDAGINPKSLAGSNSSVYTNSCISDDESLGCDERLTTNFWLLAHVRCLLANRIAYLFDLKG-PSFT 128 (270)
Q Consensus 50 ~~~~l~l~a~~~Al~dAg~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl~G-p~~~ 128 (270)
....|+.+|+++||+++|+++++++ .++++++..+.. ....+..++..+|+.+ |.++
T Consensus 51 ~~~~la~~A~~~al~~agl~~~~id----~vi~~~~~~~~~------------------~~~~~~~i~~~lG~~~~~~~~ 108 (319)
T PRK09352 51 TTSDLATEAAKKALEAAGIDPEDID----LIIVATTTPDYA------------------FPSTACLVQARLGAKNAAAFD 108 (319)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCC----EEEEEcCCCCCC------------------CchHHHHHHHHhCCCCCcEee
Confidence 4678999999999999999988887 577776543321 1124567999999977 8889
Q ss_pred ccccchhHHHHHHHHHHHHhcCCCCEEEEeeeccccCchhHHhhhcCcccCCCCCCcccCCCCCceeecCeeEEEEecCh
Q psy4744 129 IDNSWTGGIEVLRQAVQDISEGRVDTAIVGVSNLLLNANLNSLFQGLNRLSPDGKTRSFDHLANGYARSEGIVVLLLQRS 208 (270)
Q Consensus 129 v~~~cas~~~al~~A~~~i~~G~~d~~lv~g~~~~~~~~~~~~~~~~~~ls~~~~~~pfd~~~~g~~~geGA~alvL~~~ 208 (270)
|+.+|+|++.||..|+++|++|++|.+||+++|.+.... .+ +....++++||||+|+||++.
T Consensus 109 v~~~Casg~~al~~A~~~i~~g~~~~vLvv~~e~~s~~~-----------------~~-~~~~~~~~~gDGaaA~ll~~~ 170 (319)
T PRK09352 109 LSAACSGFVYALSTADQFIRSGAYKNVLVIGAEKLSRIV-----------------DW-TDRSTCVLFGDGAGAVVLGAS 170 (319)
T ss_pred ccccchhHHHHHHHHHHHHHcCCCCEEEEEEehhhcccc-----------------Cc-ccCCceEEEeccceEEEEEEc
Confidence 999999999999999999999999999999999843211 11 112346799999999999986
Q ss_pred HHHHhhcCceEeEEEeccCCCCCCCc-------CC--------C--------HHHHHHHHHHHHHHcCCCCCCccEEEcc
Q psy4744 209 ETALRSYGEVLHAESRFYGSLERPFV-------GF--------N--------QASLVEFFTNFYQKARVNPGQVDFLEAD 265 (270)
Q Consensus 209 ~~A~~~~g~~~~~~~~~~~~~~~~~~-------~~--------~--------~~~~~~a~~~al~~agi~~~did~v~~h 265 (270)
+.. + .....+..++...+.+. .| . .....++++++|+++|++++||+++.+|
T Consensus 171 ~~~-~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~g~~~~di~~~~~h 245 (319)
T PRK09352 171 EEP-G----ILSTHLGSDGSYGDLLYLPGGGSRGPASPGYLRMEGREVFKFAVRELAKVAREALEAAGLTPEDIDWLVPH 245 (319)
T ss_pred CCC-C----eEEEEEEEcCCCCCeEEeCCCCCCCCCCCCceEECCHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEC
Confidence 542 1 22223333322111100 00 0 1234678999999999999999999999
Q ss_pred cCC
Q psy4744 266 GSA 268 (270)
Q Consensus 266 gtg 268 (270)
..+
T Consensus 246 ~~~ 248 (319)
T PRK09352 246 QAN 248 (319)
T ss_pred CCC
Confidence 754
No 63
>PRK06816 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=99.77 E-value=1.6e-17 Score=147.05 Aligned_cols=138 Identities=16% Similarity=0.124 Sum_probs=107.1
Q ss_pred hHHHHHHHHHHHHHHHCCCCCCCCCCCCeEEEEccCCCCccccccCccccchhhHhhhhhhhHHHHHHHHcCCCC-CCcc
Q psy4744 50 PLVRCFIEPCFEAILDAGINPKSLAGSNSSVYTNSCISDDESLGCDERLTTNFWLLAHVRCLLANRIAYLFDLKG-PSFT 128 (270)
Q Consensus 50 ~~~~l~l~a~~~Al~dAg~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl~G-p~~~ 128 (270)
....|+.+|+++||+++|+++++|+ .+++++..+++. ....+..+...+|+++ |++.
T Consensus 62 ~~~~La~~A~~~aL~~agi~~~dId----~li~~s~~~~~~------------------~p~~a~~v~~~Lgl~~~~~~~ 119 (378)
T PRK06816 62 SNAQMAAEAIRDLLDDAGFSLGDIE----LLACGTSQPDQL------------------MPGHASMVHGELGAPPIEVVS 119 (378)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCC----EEEEEECCCCcC------------------ChHHHHHHHhhCCCCCCceee
Confidence 4578999999999999999988887 577776554321 1123457888899864 7888
Q ss_pred ccccchhHHHHHHHHHHHHhcCCCCEEEEeeeccccCchhHHhh----hcCcccCCCCCCcccCCCCCceeecCeeEEEE
Q psy4744 129 IDNSWTGGIEVLRQAVQDISEGRVDTAIVGVSNLLLNANLNSLF----QGLNRLSPDGKTRSFDHLANGYARSEGIVVLL 204 (270)
Q Consensus 129 v~~~cas~~~al~~A~~~i~~G~~d~~lv~g~~~~~~~~~~~~~----~~~~~ls~~~~~~pfd~~~~g~~~geGA~alv 204 (270)
|+.+|+|++.||..|.++|++|..+.+||+++|.+........+ ..++.+ ++..++||+.+..++++||||+|+|
T Consensus 120 v~~~Cas~~~al~~A~~~i~sg~~~~vLvv~~E~~s~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~fGDGA~A~v 198 (378)
T PRK06816 120 SAGVCAAGMMALKYAYLSVKAGESRNAVATASELASRWFRASRFEAEEEKLAEL-EENPEIAFEKDFLRWMLSDGAGAVL 198 (378)
T ss_pred ecCcCHHHHHHHHHHHHHHHCCCCCEEEEEeEccchhhhhhhhhhhHHHHhhcC-cccCCCCCCCCCCCEeeecccEEEE
Confidence 99999999999999999999999999999999985544433222 122222 2336789999999999999999999
Q ss_pred ecChHH
Q psy4744 205 LQRSET 210 (270)
Q Consensus 205 L~~~~~ 210 (270)
|++.+.
T Consensus 199 l~~~~~ 204 (378)
T PRK06816 199 LENKPR 204 (378)
T ss_pred EEecCC
Confidence 987543
No 64
>TIGR02445 fadA fatty oxidation complex, beta subunit FadA. This subunit of the FadBA complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit. This protein is almost always located adjacent to FadB (TIGR02437). The FadBA complex is the major complex active for beta-oxidation of fatty acids in E. coli.
Probab=99.77 E-value=7.4e-18 Score=148.93 Aligned_cols=194 Identities=16% Similarity=0.155 Sum_probs=132.0
Q ss_pred HHHHHHHHHHHHHHH-CCCCCCCCCCCCeEEEEccCCCCccccccCccccchhhHhhhhhhhHHHHHHHHcCCC--CCCc
Q psy4744 51 LVRCFIEPCFEAILD-AGINPKSLAGSNSSVYTNSCISDDESLGCDERLTTNFWLLAHVRCLLANRIAYLFDLK--GPSF 127 (270)
Q Consensus 51 ~~~l~l~a~~~Al~d-Ag~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl~--Gp~~ 127 (270)
...|+.+++++||++ +|+++++|| .|++|+...... . ...++..+....|+. -|++
T Consensus 25 ~~~L~~~a~~~al~~~agl~~~~Id----~v~~G~~~~~~~--------------~---g~~~ar~~~~~~g~~~~~p~~ 83 (385)
T TIGR02445 25 AEDLSAHLMSKLLARNPKVDPAEVE----DIYWGCVQQTLE--------------Q---GFNIARNAALLAQIPHTSAAV 83 (385)
T ss_pred HHHHHHHHHHHHHHhccCCCHHHcC----EEEEeccccccc--------------c---cchHHHHHHHHCCCCCCcchh
Confidence 367999999999995 699999998 677775431110 0 012444455566653 3779
Q ss_pred cccccchhHHHHHHHHHHHHhcCCCCEEEEeeeccccCchhHH------hhhc--------Ccc----------cC----
Q psy4744 128 TIDNSWTGGIEVLRQAVQDISEGRVDTAIVGVSNLLLNANLNS------LFQG--------LNR----------LS---- 179 (270)
Q Consensus 128 ~v~~~cas~~~al~~A~~~i~~G~~d~~lv~g~~~~~~~~~~~------~~~~--------~~~----------ls---- 179 (270)
+|+++|+||+.|+..|+++|++|++|++||+|+|.+....... .+.. ++. ++
T Consensus 84 tV~~~CaSG~~Ai~~Aa~~I~sG~~d~vlagG~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~ygitre~~ 163 (385)
T TIGR02445 84 TVNRLCGSSMQALHDAARAIMTGDADVCLVGGVEHMGHVPMMHGVDFHPGMSLHVAKAAGMMGLTAEMLGKMHGISREQQ 163 (385)
T ss_pred hhhhhhHHHHHHHHHHHHHHHCCCCCEEEEeeehhcccCccccCCCcchhHHhhhccccchHHHHHHHHHHHhCCCHHHH
Confidence 9999999999999999999999999999999999765332100 0000 000 00
Q ss_pred ----------------------------------------CCCCCcc-------------cCC------CCCceeecCee
Q psy4744 180 ----------------------------------------PDGKTRS-------------FDH------LANGYARSEGI 200 (270)
Q Consensus 180 ----------------------------------------~~~~~~p-------------fd~------~~~g~~~geGA 200 (270)
++...|+ |+. -.+...++|||
T Consensus 164 d~~A~~sh~~a~~a~~~g~f~nei~pv~~~~~~~~~~~~~~da~~r~~~t~e~~~~~~~v~~p~~g~lt~~~~~~~sDGA 243 (385)
T TIGR02445 164 DAFAARSHARAHAATQEGKFKNEIIPTQGHDADGFLKQFDYDEVIRPETTVESLAALRPAFDPKNGTVTAGTSSALSDGA 243 (385)
T ss_pred HHHHHHHHHHHHHHHHcCCCccceeeeeeccCCCCceeeCCCCCCCCCCCHHHHhcCCceecCCCCceecccCCCcCCce
Confidence 1111111 111 02233569999
Q ss_pred EEEEecChHHHHhhcCceEeEEEeccCCCCCCCcCCCHHHHHHHHHHHHHHcCCCCCCccEEEcccC
Q psy4744 201 VVLLLQRSETALRSYGEVLHAESRFYGSLERPFVGFNQASLVEFFTNFYQKARVNPGQVDFLEADGS 267 (270)
Q Consensus 201 ~alvL~~~~~A~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~agi~~~did~v~~hgt 267 (270)
+++||++++.|++. +..+.+++.+++...... .....+...+++++|+++||+|+||||+|+|-.
T Consensus 244 aavvL~s~e~A~~~-g~~~~a~I~g~~~~~~~~-~~~~~~~~~a~~~al~~AGi~p~DId~~Ei~da 308 (385)
T TIGR02445 244 SAMLVMSEQRANEL-GLKPRARIRSMAVAGCDP-SIMGYGPVPATQKALKRAGLSISDIDVFELNEA 308 (385)
T ss_pred EEEEEecHHHHHHC-CCCeeEEEEEEEEcCCCC-cccchhHHHHHHHHHHHcCCCHHHcCEEEEccc
Confidence 99999999999876 767778888877542111 112225678999999999999999999999953
No 65
>PRK08313 acetyl-CoA acetyltransferase; Provisional
Probab=99.76 E-value=8.4e-18 Score=148.92 Aligned_cols=195 Identities=14% Similarity=0.094 Sum_probs=133.0
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCeEEEEccCCCCccccccCccccchhhHhhhhhhhHHHHHHHHcCCCC-CCccc
Q psy4744 51 LVRCFIEPCFEAILDAGINPKSLAGSNSSVYTNSCISDDESLGCDERLTTNFWLLAHVRCLLANRIAYLFDLKG-PSFTI 129 (270)
Q Consensus 51 ~~~l~l~a~~~Al~dAg~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl~G-p~~~v 129 (270)
...|+.+|+++||+|||+++++|| ++++++. .++.. .. ..++..++..+|+++ |++.|
T Consensus 24 ~~eL~~eAa~~Al~dAgl~~~dID----~iv~~~~-~~~~~--------------~~--~~~~~~va~~LGl~~~~~~~v 82 (386)
T PRK08313 24 MAGLVREAIDRALADAGLTWDDID----AVVVGKA-PDFFE--------------GV--MMPELFLADALGATGKPLIRV 82 (386)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC----EEEEecc-ccccc--------------cc--cCchHHHHHhcCCCCCceEEE
Confidence 467999999999999999999988 6777652 22110 00 012246888999975 78899
Q ss_pred cccchhHHHHHHHHHHHHhcCCCCEEEEeeeccccCchhHH--------------------------hhhcCcccC----
Q psy4744 130 DNSWTGGIEVLRQAVQDISEGRVDTAIVGVSNLLLNANLNS--------------------------LFQGLNRLS---- 179 (270)
Q Consensus 130 ~~~cas~~~al~~A~~~i~~G~~d~~lv~g~~~~~~~~~~~--------------------------~~~~~~~ls---- 179 (270)
+++|+|+..++..|++.|++|++|.|||+|+|.+....... .+..+|...
T Consensus 83 ~~~casg~~al~~A~~~I~sG~~~~vLVvg~e~~s~~~~~~~~~~~~~~~~~~g~~~~~~~al~a~~ym~~~G~~~e~la 162 (386)
T PRK08313 83 HTAGSVGGSTAVVAASLVQSGVYRRVLAVAWEKQSESNAMWALSIPVPFTKPVGAGAGGYFAPHVRAYIRRSGAPEHIGA 162 (386)
T ss_pred eccCHHHHHHHHHHHHHHHCCCCCEEEEEEEEEccCCccccccccccccccccccchHHHHHHHHHHHHHHHCcCHHHHH
Confidence 99999999999999999999999999999998643320000 011111110
Q ss_pred -------CCCCCcccCCCC----------------------CceeecCeeEEEEecChHHHHhhcCceEeEEEeccCCCC
Q psy4744 180 -------PDGKTRSFDHLA----------------------NGYARSEGIVVLLLQRSETALRSYGEVLHAESRFYGSLE 230 (270)
Q Consensus 180 -------~~~~~~pfd~~~----------------------~g~~~geGA~alvL~~~~~A~~~~g~~~~~~~~~~~~~~ 230 (270)
.....+|+...+ +...++|||+++||.+++.|++. +..+.+++.+++...
T Consensus 163 ~vav~~~~~A~~NP~A~~r~~~~t~e~v~~s~~ia~Pl~~~d~~~~~DGAaAvvl~s~e~a~~l-~~~~~~~I~g~~~~~ 241 (386)
T PRK08313 163 MVAVKDRLNGAKNPYAHLHQPDITLEKVMASQMLWDPIRFDETCPSSDGACAVVIGDEEAADAA-AGRPVAWIHGTAMRT 241 (386)
T ss_pred HHHHHHHHHHccCcHHhcCCCCCCHHHHhcCCcccCCCchhccCCCCCceEEEEEecHHHHHhc-CCCCCeEEEEEEEEe
Confidence 122234433332 22356999999999999999864 434444555555332
Q ss_pred CCC-----cCCCHHHHHHHHHHHHHHcCCC--CCCccEEEcccC
Q psy4744 231 RPF-----VGFNQASLVEFFTNFYQKARVN--PGQVDFLEADGS 267 (270)
Q Consensus 231 ~~~-----~~~~~~~~~~a~~~al~~agi~--~~did~v~~hgt 267 (270)
+.. ......+...+.+++|++||++ ++|||++|+|-.
T Consensus 242 ~~~~~~~~~~~~~~~~~~a~~~a~~~Agi~~p~~Did~~el~d~ 285 (386)
T PRK08313 242 EPLAFAGRDQVNPQAGRDAAAALWKAAGITDPRDEIDVAEIYVP 285 (386)
T ss_pred cCcccccccccccHHHHHHHHHHHHHcCCCCChhhCCEEEeccC
Confidence 221 1123456778999999999998 699999999975
No 66
>PRK06157 acetyl-CoA acetyltransferase; Validated
Probab=99.76 E-value=1.5e-17 Score=147.82 Aligned_cols=193 Identities=18% Similarity=0.224 Sum_probs=128.2
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCeEEEEccCCCCccccccCccccchhhHhhhhhhhHHHHHHHHcCCCC-CCccc
Q psy4744 51 LVRCFIEPCFEAILDAGINPKSLAGSNSSVYTNSCISDDESLGCDERLTTNFWLLAHVRCLLANRIAYLFDLKG-PSFTI 129 (270)
Q Consensus 51 ~~~l~l~a~~~Al~dAg~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl~G-p~~~v 129 (270)
...|+.+++++||+|+|+++++|+ ++++|+....+.. ......++..+|+.+ |..+|
T Consensus 27 ~~~L~~ea~~~AL~dagl~~~dID----~v~vg~~~~~~~~------------------~~~~~~~a~~lGl~~~~~~~v 84 (398)
T PRK06157 27 AEDLMVEAFLEALADAGIEPKDID----AAWFGTHYDEIGS------------------GKSGTPLSRALRLPNIPVTRV 84 (398)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC----EEEEEeccccccc------------------cchhHHHHHHcCCCCCCEEEE
Confidence 468999999999999999999998 6777754322100 001134677899965 77789
Q ss_pred cccchhHHHHHHHHHHHHhcCCCCEEEEeeeccccCchhH---H-----hhh-cCcccC---------------------
Q psy4744 130 DNSWTGGIEVLRQAVQDISEGRVDTAIVGVSNLLLNANLN---S-----LFQ-GLNRLS--------------------- 179 (270)
Q Consensus 130 ~~~cas~~~al~~A~~~i~~G~~d~~lv~g~~~~~~~~~~---~-----~~~-~~~~ls--------------------- 179 (270)
+.+|+|++.+|..|++.|++|++|++||+|+|.+...... . .+. ..+.+.
T Consensus 85 ~~~c~sg~~ai~~A~~~I~sG~~d~vlv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~a~~~~~~yG~t~e 164 (398)
T PRK06157 85 ENFCATGSEAFRGAVYAVASGAYDIALALGVEKLKDTGYGGLPVANPGTLADMTMPNVTAPGNFAQLASAYAAKYGVSRE 164 (398)
T ss_pred ecccHHHHHHHHHHHHHHHCCCCCEEEEEEEeecccCccccccccccccchhcccccCchHHHHHHHHHHHHHHhCCCHH
Confidence 9999999999999999999999999999999975431100 0 000 000000
Q ss_pred --------------------CCC------------CC----cccCCCCCceeecCeeEEEEecChHHHHhhcCceEeEEE
Q psy4744 180 --------------------PDG------------KT----RSFDHLANGYARSEGIVVLLLQRSETALRSYGEVLHAES 223 (270)
Q Consensus 180 --------------------~~~------------~~----~pfd~~~~g~~~geGA~alvL~~~~~A~~~~g~~~~~~~ 223 (270)
|+. .+ .|+. .-+...++|||+++||.+++.|++. +....+++
T Consensus 165 ~~~~~~a~vav~~~~~A~~np~A~~r~~~t~e~v~~s~~v~~Pl~-~~d~~~~~DGAaA~vl~s~~~A~~l-~~~~~v~I 242 (398)
T PRK06157 165 DLKRAMAHVSVKSHANGARNPKAHLRKAVTEEQVLKAPMIAGPLG-LFDCCGVSDGAAAAIVTTPEIARAL-GKKDPVYV 242 (398)
T ss_pred HHcccccHHHHHHHHHHhcCChhhcCCCCCHHHHhcCCcccCCCc-hhccCCCCCccEEEEEecHHHHHhh-CCCCCeEE
Confidence 000 01 1111 1134457999999999999999865 43244555
Q ss_pred eccCCCCCC--------CcCCCHHHHHHHHHHHHHHcCCC--CCCccEEEcccC
Q psy4744 224 RFYGSLERP--------FVGFNQASLVEFFTNFYQKARVN--PGQVDFLEADGS 267 (270)
Q Consensus 224 ~~~~~~~~~--------~~~~~~~~~~~a~~~al~~agi~--~~did~v~~hgt 267 (270)
.+++..... ...........+.+++|++|||+ ++|||++|+|-.
T Consensus 243 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~a~~~AGl~~~~~Did~~Ei~D~ 296 (398)
T PRK06157 243 KALQLAVSNGWELQYNGWDGSYFPTTRIAARKAYREAGITDPREELSMAEVHDC 296 (398)
T ss_pred EEEEEecccccccccccccccccHHHHHHHHHHHHHcCCCCchhcCCEEEEecC
Confidence 555432111 11112233567999999999998 799999999964
No 67
>PRK08947 fadA 3-ketoacyl-CoA thiolase; Reviewed
Probab=99.76 E-value=9.4e-18 Score=148.45 Aligned_cols=193 Identities=16% Similarity=0.136 Sum_probs=131.2
Q ss_pred HHHHHHHHHHHHHH-CCCCCCCCCCCCeEEEEccCCCCccccccCccccchhhHhhhhhhhHHHHHHHHcCCC--CCCcc
Q psy4744 52 VRCFIEPCFEAILD-AGINPKSLAGSNSSVYTNSCISDDESLGCDERLTTNFWLLAHVRCLLANRIAYLFDLK--GPSFT 128 (270)
Q Consensus 52 ~~l~l~a~~~Al~d-Ag~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl~--Gp~~~ 128 (270)
..|+.+++++||++ +|+++++|| .+++|+....... ...++..++...|+. -|+++
T Consensus 28 ~~L~~~~~~~al~~~agl~~~~Id----~vi~g~~~~~~~~-----------------g~~~ar~~~~~~Gl~~~~p~~~ 86 (387)
T PRK08947 28 EDLSAHLMRSLLARNPALDPAEID----DIIWGCVQQTLEQ-----------------GFNIARNAALLAGIPHSVPAVT 86 (387)
T ss_pred HHHHHHHHHHHHHhccCcChHHhC----eEEEEeccccccc-----------------cccHHHHHHHHcCCCCCCccee
Confidence 67889999999994 899999888 5777754311100 012344577778885 37799
Q ss_pred ccccchhHHHHHHHHHHHHhcCCCCEEEEeeeccccCchhHH------hh-------------------hcCcccC----
Q psy4744 129 IDNSWTGGIEVLRQAVQDISEGRVDTAIVGVSNLLLNANLNS------LF-------------------QGLNRLS---- 179 (270)
Q Consensus 129 v~~~cas~~~al~~A~~~i~~G~~d~~lv~g~~~~~~~~~~~------~~-------------------~~~~~ls---- 179 (270)
|+++|+||+.|+..|+++|++|++|++||+|+|.+....... .+ .++|...
T Consensus 87 V~~~caSG~~Ai~~A~~~I~sG~~d~vlv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~ygisre~~~ 166 (387)
T PRK08947 87 VNRLCGSSMQALHDAARAIMTGDGDVFLIGGVEHMGHVPMNHGVDFHPGLSKNVAKAAGMMGLTAEMLGKMHGISREQQD 166 (387)
T ss_pred eechhHHHHHHHHHHHHHHHCCCCCEEEEccccccccCccccccCcchhhhhhccccchHHHHHHHHHHHHhCCCHHHHH
Confidence 999999999999999999999999999999999765421100 00 0000000
Q ss_pred --------------C-------------------------CCCCc------------c-cCC------CCCceeecCeeE
Q psy4744 180 --------------P-------------------------DGKTR------------S-FDH------LANGYARSEGIV 201 (270)
Q Consensus 180 --------------~-------------------------~~~~~------------p-fd~------~~~g~~~geGA~ 201 (270)
+ +...| | |+. ..+...++|||+
T Consensus 167 ~~avksh~~a~~a~~~g~f~~ei~pv~~~~~~~~~~~~~~da~~r~~~t~e~~~~~~~v~~p~~g~lt~~~~~~~sDGAa 246 (387)
T PRK08947 167 AFAARSHQRAWAATQEGRFKNEIIPTEGHDADGVLKLFDYDEVIRPETTVEALAALRPAFDPVNGTVTAGTSSALSDGAS 246 (387)
T ss_pred HHHHHHHHHHHHHHHcCCCcceEeeeeecCCCCCceeecCCCCCcCCCCHHHHhcCCceeeCCCCcEEccccCCcCCceE
Confidence 0 11111 0 111 122335799999
Q ss_pred EEEecChHHHHhhcCceEeEEEeccCCCCCCCcCCCHHHHHHHHHHHHHHcCCCCCCccEEEcccC
Q psy4744 202 VLLLQRSETALRSYGEVLHAESRFYGSLERPFVGFNQASLVEFFTNFYQKARVNPGQVDFLEADGS 267 (270)
Q Consensus 202 alvL~~~~~A~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~agi~~~did~v~~hgt 267 (270)
++||++++.|++. +..+.+++.+++....... ....+...+++++|+++|++|+|||++|+|-.
T Consensus 247 Avvl~s~~~A~~~-g~~p~~~I~g~~~~~~~~~-~~~~~~~~a~~~al~~Agl~~~DId~~El~d~ 310 (387)
T PRK08947 247 AMLVMSESRAKEL-GLKPRARIRSMAVAGCDPS-IMGYGPVPATQKALKRAGLSISDIDVFELNEA 310 (387)
T ss_pred EEEEccHHHHHHC-CCCccEEEEEEEEcCcCcc-cccccHHHHHHHHHHHcCCCHHHCCEEEeccc
Confidence 9999999999876 6666677777765421111 11223578999999999999999999999953
No 68
>PRK06158 thiolase; Provisional
Probab=99.76 E-value=2.3e-17 Score=146.10 Aligned_cols=189 Identities=12% Similarity=0.073 Sum_probs=125.1
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCeEEEEccCCCCccccccCccccchhhHhhhhhhhHHHHHHHHcCCCC-CCccc
Q psy4744 51 LVRCFIEPCFEAILDAGINPKSLAGSNSSVYTNSCISDDESLGCDERLTTNFWLLAHVRCLLANRIAYLFDLKG-PSFTI 129 (270)
Q Consensus 51 ~~~l~l~a~~~Al~dAg~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl~G-p~~~v 129 (270)
...|+.+|+++||+|||+++++|| ++++++.... .....++..+|+++ |.+.+
T Consensus 28 ~~eL~~eA~~~Al~dAgl~~~dID----~iv~~~~~~~----------------------~~~~~la~~lGl~~~~~~~~ 81 (384)
T PRK06158 28 AMELLAQAAHRALADAGLTMADVD----GLFTASPDDA----------------------LWGLSVAEYLGIRPRFVDGT 81 (384)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC----EEEEecCCCC----------------------CcHHHHHHHcCCCCeeeccc
Confidence 468999999999999999998888 6777643100 01134888899964 77789
Q ss_pred cccchhHHHHHHHHHHHHhcCCCCEEEEe-eeccccCc------hhHHhhh-cCcccC----------------------
Q psy4744 130 DNSWTGGIEVLRQAVQDISEGRVDTAIVG-VSNLLLNA------NLNSLFQ-GLNRLS---------------------- 179 (270)
Q Consensus 130 ~~~cas~~~al~~A~~~i~~G~~d~~lv~-g~~~~~~~------~~~~~~~-~~~~ls---------------------- 179 (270)
+++|+|+..+|..|++.|++|.+|+|||+ |.+.+... .....+. .++...
T Consensus 82 ~~g~~s~~~al~~A~~~I~sG~~d~vLV~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~al~a~~ym~~yG~t~e~ 161 (384)
T PRK06158 82 MIGGSSFLAHLLPAALALEAGLCDVALICYGSNQRSAGGKLRSMLDPQPYEAPYKPVNPVSAYALAAARHMHQYGTTREQ 161 (384)
T ss_pred cCccHHHHHHHHHHHHHHHcCCCCEEEEeeccccccCcccccccccccchhcccCCCCcHHHHHHHHHHHHHHHCcCHHH
Confidence 99999999999999999999999999986 55432110 0000000 111110
Q ss_pred ---------CCCCCcccCCC---------------------CCceeecCeeEEEEecChHHHHhhcCceEeEEEeccCCC
Q psy4744 180 ---------PDGKTRSFDHL---------------------ANGYARSEGIVVLLLQRSETALRSYGEVLHAESRFYGSL 229 (270)
Q Consensus 180 ---------~~~~~~pfd~~---------------------~~g~~~geGA~alvL~~~~~A~~~~g~~~~~~~~~~~~~ 229 (270)
.+...+|+... .+..+++|||+++||++++.|++. +.. .+.+.+.+..
T Consensus 162 ~a~vav~~~~~a~~NP~A~~~~~~t~e~vl~s~~ia~Pl~~~d~~~~~DGAaAvVL~s~e~A~~l-~~~-~v~i~g~~~~ 239 (384)
T PRK06158 162 LAEVAVAARQWAQLNPEAFMRDPLTIDDVLAARMVSDPLSVRDCCLVTDGAGAVVMVRADRARDL-PRP-PVYVLGAAAA 239 (384)
T ss_pred HHHHHHHHHHHHhcCchhhhCCCCCHHHHhcCCccCCCCchhhcCCccCCeEEEEEecHHHHhhc-CCC-cEEEEEEEEe
Confidence 01112222211 344578999999999999999864 221 2334433322
Q ss_pred CCC--C---cCCCHHHHHHHHHHHHHHcCCCCCCccEEEcccC
Q psy4744 230 ERP--F---VGFNQASLVEFFTNFYQKARVNPGQVDFLEADGS 267 (270)
Q Consensus 230 ~~~--~---~~~~~~~~~~a~~~al~~agi~~~did~v~~hgt 267 (270)
.+. . ..+......++++++|++|||+|+|||++|+|-.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~aa~~A~~~AGi~p~DId~~ElyD~ 282 (384)
T PRK06158 240 TWHRQISSMPDLTVTAAAESGPRAFAMAGLTPADIDVVELYDA 282 (384)
T ss_pred cCCcccccccchhhhHHHHHHHHHHHHcCCCHHHCcEEEecCC
Confidence 111 1 1112345678999999999999999999999975
No 69
>PLN02644 acetyl-CoA C-acetyltransferase
Probab=99.76 E-value=2e-17 Score=146.88 Aligned_cols=193 Identities=21% Similarity=0.203 Sum_probs=132.0
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCeEEEEccCCCCccccccCccccchhhHhhhhhhhHHHHHHHHcCCC--CCCcc
Q psy4744 51 LVRCFIEPCFEAILDAGINPKSLAGSNSSVYTNSCISDDESLGCDERLTTNFWLLAHVRCLLANRIAYLFDLK--GPSFT 128 (270)
Q Consensus 51 ~~~l~l~a~~~Al~dAg~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl~--Gp~~~ 128 (270)
...|+.+++++||+|||+++++|| +|++|+...... ....+..++..+|+. -|.++
T Consensus 25 ~~~L~~~a~~~al~dAgl~~~~ID----~vv~g~~~~~~~------------------~~~~~~~~~~~~Gl~~~~p~~~ 82 (394)
T PLN02644 25 ATELGSIAIQAALERAGVDPALVQ----EVFFGNVLSANL------------------GQAPARQAALGAGLPPSTICTT 82 (394)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC----EEEEEecCcCCc------------------CCcHHHHHHHhcCCCCCCceEE
Confidence 368999999999999999999988 677765332110 001233477788885 37788
Q ss_pred ccccchhHHHHHHHHHHHHhcCCCCEEEEeeeccccCchh---------------HH-hh--h----cCcc--c------
Q psy4744 129 IDNSWTGGIEVLRQAVQDISEGRVDTAIVGVSNLLLNANL---------------NS-LF--Q----GLNR--L------ 178 (270)
Q Consensus 129 v~~~cas~~~al~~A~~~i~~G~~d~~lv~g~~~~~~~~~---------------~~-~~--~----~~~~--l------ 178 (270)
|+.+|+|++.+|..|+++|++|++|++||+|+|.+..... .. .. . ..+. +
T Consensus 83 v~~~caSg~~av~~Aa~~I~sG~~d~vlv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~ 162 (394)
T PLN02644 83 VNKVCASGMKAVMLAAQSIQLGINDVVVAGGMESMSNAPKYLPEARKGSRLGHDTVVDGMLKDGLWDVYNDFGMGVCAEL 162 (394)
T ss_pred EeccchHHHHHHHHHHHHHHcCCCCEEEEEeEEecCCCcccccccccccccccchhhhhccccccccccCCCcHHHHHHH
Confidence 9999999999999999999999999999999886532110 00 00 0 0000 0
Q ss_pred -------C------------------CC-CCCc--------------c---cCC--------------------------
Q psy4744 179 -------S------------------PD-GKTR--------------S---FDH-------------------------- 189 (270)
Q Consensus 179 -------s------------------~~-~~~~--------------p---fd~-------------------------- 189 (270)
+ ++ +..+ | ++.
T Consensus 163 ~~~~yG~tre~la~vav~s~~~a~~a~~~~~~~~ei~~~~v~~~~~~~~~~~~~de~~~~~~~~~l~~l~p~f~~~~g~v 242 (394)
T PLN02644 163 CADQYSISREEQDAYAIQSYERAIAAQEAGAFAWEIVPVEVPGGRGRPSVIVDKDEGLGKFDPAKLRKLRPSFKEDGGSV 242 (394)
T ss_pred HHHHhCCCHHHHHHHHHHHHHHHHHhHHcCCCccceeeEEeccCCCCCceEeecCCCcCCCCHHHHhCCCCcccCCCCcE
Confidence 0 00 0111 1 100
Q ss_pred -CCCceeecCeeEEEEecChHHHHhhcCceEeEEEeccCCCCCCCcCCCHHHHHHHHHHHHHHcCCCCCCccEEEcccC
Q psy4744 190 -LANGYARSEGIVVLLLQRSETALRSYGEVLHAESRFYGSLERPFVGFNQASLVEFFTNFYQKARVNPGQVDFLEADGS 267 (270)
Q Consensus 190 -~~~g~~~geGA~alvL~~~~~A~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~agi~~~did~v~~hgt 267 (270)
..+...++||++++||++++.|++. +..+++++.+++...+.. .........+++++|+++|++|+|||++|+|-.
T Consensus 243 t~~~~~~~~DGaaavvl~s~~~A~~~-~~~~~a~I~g~~~~~~~~-~~~~~~~~~a~~~al~~Agi~~~Did~~Ei~d~ 319 (394)
T PLN02644 243 TAGNASSISDGAAALVLVSGEKALEL-GLQVIAKIRGYADAAQAP-ELFTTAPALAIPKALKHAGLEASQVDYYEINEA 319 (394)
T ss_pred eccccCCCCcceEEEEeccHHHHHHC-CCCeEEEEEEEEEcCCCC-cccchhHHHHHHHHHHHcCCCHHHCCEEEeCcH
Confidence 0124456999999999999999876 777777888877543321 112234457999999999999999999999853
No 70
>PRK06366 acetyl-CoA acetyltransferase; Provisional
Probab=99.76 E-value=1.1e-17 Score=148.36 Aligned_cols=192 Identities=19% Similarity=0.152 Sum_probs=131.0
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCeEEEEccCCCCccccccCccccchhhHhhhhhhhHHHHHHHHcCCCC--CCcc
Q psy4744 51 LVRCFIEPCFEAILDAGINPKSLAGSNSSVYTNSCISDDESLGCDERLTTNFWLLAHVRCLLANRIAYLFDLKG--PSFT 128 (270)
Q Consensus 51 ~~~l~l~a~~~Al~dAg~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl~G--p~~~ 128 (270)
..+|+.+++++||+|+|+++++|| ++++|+...... ...++..++..+|+.. |.++
T Consensus 26 ~~~L~~~a~~~al~dagi~~~dID----~vi~g~~~~~~~------------------~~~~a~~~~~~~Gl~~~~p~~~ 83 (388)
T PRK06366 26 APQLGGAAIKAVIDDAKLDPALVQ----EVIMGNVIQAGV------------------GQNPAGQAAYHAGLPFGVTKYT 83 (388)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC----EEEEEecCCCCc------------------cCcHHHHHHHHCCCCCCCccee
Confidence 467999999999999999999998 677775432210 0112455778899964 9999
Q ss_pred ccccchhHHHHHHHHHHHHhcCCCCEEEEeeeccccCchh------------H--------HhhhcCc----------cc
Q psy4744 129 IDNSWTGGIEVLRQAVQDISEGRVDTAIVGVSNLLLNANL------------N--------SLFQGLN----------RL 178 (270)
Q Consensus 129 v~~~cas~~~al~~A~~~i~~G~~d~~lv~g~~~~~~~~~------------~--------~~~~~~~----------~l 178 (270)
|+++|+||+.++..|+++|++|++|++||+|+|.+..... . ..+...+ .+
T Consensus 84 v~~~caSg~~av~~Aa~~I~sG~~d~vla~G~e~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~mal 163 (388)
T PRK06366 84 VNVVCASGMLAVESAAREIMLGERDLVIAGGMENMSNAPFLLPSDLRWGPKHLLHKNYKIDDAMLVDGLIDAFYFEHMGV 163 (388)
T ss_pred eechhhHHHHHHHHHHHHHhcCCCCEEEEEeeEccccCcccccccccccccccccccchhhhhhcccCccccccCccHHH
Confidence 9999999999999999999999999999999887542100 0 0000011 00
Q ss_pred C-----------------------------CCC-CCc----cc------------------------CC-----CCCcee
Q psy4744 179 S-----------------------------PDG-KTR----SF------------------------DH-----LANGYA 195 (270)
Q Consensus 179 s-----------------------------~~~-~~~----pf------------------------d~-----~~~g~~ 195 (270)
. |.. ..+ || +. -.+...
T Consensus 164 ~A~~~~~~yGitrE~~a~vAv~s~~~A~~np~ag~~~~ei~p~~~~~~d~~~r~~t~e~~~~s~~v~~p~g~lt~~d~s~ 243 (388)
T PRK06366 164 SAERTARKYGITREMADEYSVQSYERAIRATESGEFRNEIVPFNDLDRDEGIRKTTMEDLAKLPPAFDKNGILTAGNSAQ 243 (388)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHhhHhcCCcccccccccccccccCcccCCHHHHhhCCCccCCCCCEehhhcCC
Confidence 0 111 110 11 10 012224
Q ss_pred ecCeeEEEEecChHHHHhhcCceEeEEEeccCCCCCCCcCCCHHHHHHHHHHHHHHcCCCCCCccEEEccc
Q psy4744 196 RSEGIVVLLLQRSETALRSYGEVLHAESRFYGSLERPFVGFNQASLVEFFTNFYQKARVNPGQVDFLEADG 266 (270)
Q Consensus 196 ~geGA~alvL~~~~~A~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~agi~~~did~v~~hg 266 (270)
++|||+++||.+++.|++. +..+.+++.+++......... ......+++++|+++|++|+|||++|+|-
T Consensus 244 ~sDGAaAvvl~See~A~~l-~~~pv~~I~g~~~~~~~~~~~-~~~~~~A~~~al~~Agl~~~DiDv~Ei~d 312 (388)
T PRK06366 244 LSDGGSALVMASEKAINEY-GLKPIARITGYESASLDPLDF-VEAPIPATRKLLEKQNKSIDYYDLVEHNE 312 (388)
T ss_pred cccceeEEEEecHHHHHHc-CCCcCEEEEEEEEEecCHHHh-cccHHHHHHHHHHHcCCCHHHcceeeccc
Confidence 6999999999999999875 555555777766542211111 12236899999999999999999999985
No 71
>PRK07204 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=99.75 E-value=9.9e-18 Score=145.96 Aligned_cols=181 Identities=15% Similarity=0.172 Sum_probs=126.7
Q ss_pred ChHHHHHHHHHHHHHHHCCCCCCCCCCCCeEEEEccCCCCccccccCccccchhhHhhhhhhhHHHHHHHHcCCCC---C
Q psy4744 49 DPLVRCFIEPCFEAILDAGINPKSLAGSNSSVYTNSCISDDESLGCDERLTTNFWLLAHVRCLLANRIAYLFDLKG---P 125 (270)
Q Consensus 49 ~~~~~l~l~a~~~Al~dAg~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl~G---p 125 (270)
.....|+.+|+++||+++|+++++++ .+++++..+++. ....+.+++..+|+++ |
T Consensus 50 ~~~~~la~~Aa~~aL~~ag~~~~dId----~li~~~~~~~~~------------------~p~~a~~v~~~lgl~~~~~~ 107 (329)
T PRK07204 50 ETSSYMGAEAAKKAVEDAKLTLDDID----CIICASGTIQQA------------------IPCTASLIQEQLGLQHSGIP 107 (329)
T ss_pred CCHHHHHHHHHHHHHHHcCCCHHHCC----EEEEECCCCCCC------------------CccHHHHHHHHhCCCCCCce
Confidence 35678999999999999999998887 466766543321 1245677999999975 8
Q ss_pred CccccccchhHHHHHHHHHHHHhcCCCCEEEEeeeccccCchhHHhhhcCcccCCCCCCcccCCCCCceeecCeeEEEEe
Q psy4744 126 SFTIDNSWTGGIEVLRQAVQDISEGRVDTAIVGVSNLLLNANLNSLFQGLNRLSPDGKTRSFDHLANGYARSEGIVVLLL 205 (270)
Q Consensus 126 ~~~v~~~cas~~~al~~A~~~i~~G~~d~~lv~g~~~~~~~~~~~~~~~~~~ls~~~~~~pfd~~~~g~~~geGA~alvL 205 (270)
++.|+.+|++++.||..|.++|++|.++.+||+++|...... .++....++++||||+|+||
T Consensus 108 ~~~v~~~C~~~~~al~~a~~~l~~g~~~~~Lvv~~e~~s~~~------------------~~~~~~~~~lfGDGAaA~ll 169 (329)
T PRK07204 108 CFDINSTCLSFITALDTISYAIECGRYKRVLIISSEISSVGL------------------NWGQNESCILFGDGAAAVVI 169 (329)
T ss_pred EEEccchhHHHHHHHHHHHHHHHCCCCCEEEEEEeccccCCC------------------CcccCcceEEEecccEEEEE
Confidence 889999999999999999999999999999999999832110 12223457899999999999
Q ss_pred cChHHHHhhcCceE--------eEEEeccCCCCCCC--c---------CCCH--------HHHHHHHHHHHHHcCCCCCC
Q psy4744 206 QRSETALRSYGEVL--------HAESRFYGSLERPF--V---------GFNQ--------ASLVEFFTNFYQKARVNPGQ 258 (270)
Q Consensus 206 ~~~~~A~~~~g~~~--------~~~~~~~~~~~~~~--~---------~~~~--------~~~~~a~~~al~~agi~~~d 258 (270)
++.+...+..+... +..+.+.+...... . ..+. ....++++++|+++|++++|
T Consensus 170 ~~~~~~~~il~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~gl~~~d 249 (329)
T PRK07204 170 TKGDHSSRILASHMETYSSGAHLSEIRGGGTMIHPREYSEERKEDFLFDMNGRAIFKLSSKYLMKFIDKLLMDAGYTLAD 249 (329)
T ss_pred EEcCCCCcEEEEEEEEecCCCCceEEecCCcCCCCcccccccccCceEEECCHHHHHHHHHHHHHHHHHHHHHcCCCHHH
Confidence 97553221111100 11122212110000 0 0011 12458999999999999999
Q ss_pred ccEEEcccCCC
Q psy4744 259 VDFLEADGSAI 269 (270)
Q Consensus 259 id~v~~hgtgt 269 (270)
||++.+|.++.
T Consensus 250 id~~~~H~~~~ 260 (329)
T PRK07204 250 IDLIVPHQASG 260 (329)
T ss_pred CCEEEeCCCCH
Confidence 99999998764
No 72
>TIGR00747 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III. Active site residues include Cys112, His244 and Asn274 of E. coli FabH. Cys-112 is the site of acyl group attachment.
Probab=99.75 E-value=3.9e-17 Score=141.58 Aligned_cols=175 Identities=17% Similarity=0.176 Sum_probs=124.7
Q ss_pred hHHHHHHHHHHHHHHHCCCCCCCCCCCCeEEEEccCCCCccccccCccccchhhHhhhhhhhHHHHHHHHcCCCC-CCcc
Q psy4744 50 PLVRCFIEPCFEAILDAGINPKSLAGSNSSVYTNSCISDDESLGCDERLTTNFWLLAHVRCLLANRIAYLFDLKG-PSFT 128 (270)
Q Consensus 50 ~~~~l~l~a~~~Al~dAg~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl~G-p~~~ 128 (270)
....|+.+|+++||+++|+++++++ .+++++...++. ....+.+++..+|+++ |.+.
T Consensus 50 ~~~~la~~A~~~al~~agl~~~~Id----~~i~~~~~~~~~------------------~~~~a~~l~~~lGl~~~~~~~ 107 (318)
T TIGR00747 50 TSSTMGFEAAKRAIENAGISKDDID----LIIVATTTPDHA------------------FPSAACMVQAYLGIKGIPAFD 107 (318)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCC----EEEEECCCCCCC------------------CChHHHHHHHHhCCCCCcEee
Confidence 4578999999999999999988877 677766544321 1124567999999987 8899
Q ss_pred ccccchhHHHHHHHHHHHHhcCCCCEEEEeeeccccCchhHHhhhcCcccCCCCCCcccCCCCCceeecCeeEEEEecCh
Q psy4744 129 IDNSWTGGIEVLRQAVQDISEGRVDTAIVGVSNLLLNANLNSLFQGLNRLSPDGKTRSFDHLANGYARSEGIVVLLLQRS 208 (270)
Q Consensus 129 v~~~cas~~~al~~A~~~i~~G~~d~~lv~g~~~~~~~~~~~~~~~~~~ls~~~~~~pfd~~~~g~~~geGA~alvL~~~ 208 (270)
|+.+|+|++.||..|+++|++|.++.+||+++|...... ++.+ .....++||||+|+||++.
T Consensus 108 v~~~C~s~~~al~~A~~~i~~g~~~~~Lvv~~e~~~~~~-----------------~~~~-~~~~~~~GDGAaA~lL~~~ 169 (318)
T TIGR00747 108 LSAACAGFIYALSVAKQYIESGKYKTVLVVGAEKLSSTL-----------------DWTD-RGTCVLFGDGAGAVVLGES 169 (318)
T ss_pred hhhhhHHHHHHHHHHHHHHHcCCCCEEEEEEehhhcCcC-----------------CcCC-CCeEEEEecceeEEEEeec
Confidence 999999999999999999999999999999999843221 1111 1235679999999999876
Q ss_pred HHHHhhcCceEeEEEeccCCCCCCCcC------------------C-----CHHHHHHHHHHHHHHcCCCCCCccEEEcc
Q psy4744 209 ETALRSYGEVLHAESRFYGSLERPFVG------------------F-----NQASLVEFFTNFYQKARVNPGQVDFLEAD 265 (270)
Q Consensus 209 ~~A~~~~g~~~~~~~~~~~~~~~~~~~------------------~-----~~~~~~~a~~~al~~agi~~~did~v~~h 265 (270)
+...+ +....+..++...+.... + ......++++++|+++|++++||+++.+|
T Consensus 170 ~~~~~----i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~di~~~~~h 245 (318)
T TIGR00747 170 EDPGG----IISTHLGADGTQGEALYLPAGGRPTSGPSPFITMEGNEVFKHAVRKMGDVVEETLEANGLDPEDIDWFVPH 245 (318)
T ss_pred CCCCc----EEEEEEEEcCCCcceEEECCCCcCCCCCCCceEECCHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEC
Confidence 53211 122222222211111000 0 01234678899999999999999999999
Q ss_pred cCC
Q psy4744 266 GSA 268 (270)
Q Consensus 266 gtg 268 (270)
..+
T Consensus 246 ~~~ 248 (318)
T TIGR00747 246 QAN 248 (318)
T ss_pred CCC
Confidence 875
No 73
>PRK06065 acetyl-CoA acetyltransferase; Provisional
Probab=99.75 E-value=2.8e-17 Score=145.40 Aligned_cols=194 Identities=12% Similarity=0.033 Sum_probs=129.2
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCeEEEEccCCCCccccccCccccchhhHhhhhhhhHHHHHHHHcCCC-CCCccc
Q psy4744 51 LVRCFIEPCFEAILDAGINPKSLAGSNSSVYTNSCISDDESLGCDERLTTNFWLLAHVRCLLANRIAYLFDLK-GPSFTI 129 (270)
Q Consensus 51 ~~~l~l~a~~~Al~dAg~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl~-Gp~~~v 129 (270)
...|+.+|+++||+|+|+++++|| ++++++....+. . ....+..++..+|+. .|.+.|
T Consensus 29 ~~~L~~~A~~~Al~dagl~~~dID----~~i~~~~~~~~~---------------~--~~~~a~~l~~~lG~~~~~~~~V 87 (392)
T PRK06065 29 PQELAWEAASKALDEAGLELKDID----CVVIGSAPDAFD---------------G--VHMKGEYLSHGSGGIRKPVSRV 87 (392)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC----EEEEeccCCccc---------------c--cccHHHHHHHHcCCCCCCeEEE
Confidence 468999999999999999999988 677764211110 0 112445688888876 588899
Q ss_pred cccchhHHHHHHHHHHHHhcCCCCEEEEeeeccccCch----hHH------hhh-cCcccC-------------------
Q psy4744 130 DNSWTGGIEVLRQAVQDISEGRVDTAIVGVSNLLLNAN----LNS------LFQ-GLNRLS------------------- 179 (270)
Q Consensus 130 ~~~cas~~~al~~A~~~i~~G~~d~~lv~g~~~~~~~~----~~~------~~~-~~~~ls------------------- 179 (270)
+++|+|+..+|..|+++|++|++|.|||+|++.+.... ... .+. ..+...
T Consensus 88 ~~~gasG~~al~~A~~~I~sG~ad~vLVvg~e~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~~~~Al~a~rym~~yG~~~ 167 (392)
T PRK06065 88 YVGGATGVMTAIAGWYHVASGLCQKVLAVAEEKMSPARPHPQAVFRYIWDPILEKPLNPNLIWIFAMEMHRYMATYGIKK 167 (392)
T ss_pred ecCchhHHHHHHHHHHHHhCCCCCEEEEEEeecccccccchhHHHhhhccchhccCCCccHHHHHHHHHHHHHHHHCcCH
Confidence 99999999999999999999999999999998742210 000 000 111100
Q ss_pred -----------CCCCCcccCCCC---------------------CceeecCeeEEEEecChHHHHhhcCceEeEEEeccC
Q psy4744 180 -----------PDGKTRSFDHLA---------------------NGYARSEGIVVLLLQRSETALRSYGEVLHAESRFYG 227 (270)
Q Consensus 180 -----------~~~~~~pfd~~~---------------------~g~~~geGA~alvL~~~~~A~~~~g~~~~~~~~~~~ 227 (270)
.+...+|+...+ +...++|||+++||.+++.|++. +. ....+.+.+
T Consensus 168 e~lA~vav~~~~~A~~NP~A~~r~~lt~e~vl~s~~ia~Pl~l~d~~~~~DGAaA~vl~s~e~A~~l-~~-~~v~I~g~~ 245 (392)
T PRK06065 168 EEIALVSVKNKRNALNNPYAQLGSKITVEDVLKSEVLVWPVQLLDVSPVSDGAAAIVLASEDLARRY-TD-TPVWVEGVG 245 (392)
T ss_pred HHHHHHHHHHHHhhccCchhhhcCCCCHHHHhcCCcccCCCchhhcCCCCCceEEEEEeCHHHHHhc-CC-CCEEEEEEE
Confidence 111233333322 23357999999999999999864 32 222344444
Q ss_pred CCCCCC-----cCCCHHHHHHHHHHHHHHcCCCC--CCccEEEcccC
Q psy4744 228 SLERPF-----VGFNQASLVEFFTNFYQKARVNP--GQVDFLEADGS 267 (270)
Q Consensus 228 ~~~~~~-----~~~~~~~~~~a~~~al~~agi~~--~did~v~~hgt 267 (270)
...+.. ......+...+.+++|+++|+++ +|||++|+|-.
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~a~~~a~~~aGi~~p~~diD~~ei~D~ 292 (392)
T PRK06065 246 WTLDNTEWPNRDLAYPRYVEFAARMAYKMAGIERPRKEIDVAEPYDP 292 (392)
T ss_pred EecCccccccccccccHHHHHHHHHHHHHcCCCCchhhCcEEEecCC
Confidence 321111 11233445789999999999985 99999999964
No 74
>PRK06365 acetyl-CoA acetyltransferase; Provisional
Probab=99.75 E-value=4.4e-17 Score=145.94 Aligned_cols=196 Identities=15% Similarity=0.112 Sum_probs=125.4
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCeEEEEccCCCCccccccCccccchhhHhhhhhhhHHHHHHHHcCCCC-CCccc
Q psy4744 51 LVRCFIEPCFEAILDAGINPKSLAGSNSSVYTNSCISDDESLGCDERLTTNFWLLAHVRCLLANRIAYLFDLKG-PSFTI 129 (270)
Q Consensus 51 ~~~l~l~a~~~Al~dAg~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl~G-p~~~v 129 (270)
...|+.+|+++||+|||+++++|| +++++.....+. + .+.....++..+|+.. |+++|
T Consensus 37 ~~eL~~eA~~~Al~dagl~~~dID----~vv~~~~~~~~~---------------g--~~~~~~~~~~~lGl~~~~~~~v 95 (430)
T PRK06365 37 FRERVKKAFDYAMNDAGLTLADID----GSVASYFSDHFQ---------------R--QLLAGIMVQDYLGLVPKPSKRI 95 (430)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHcC----EEEEeccccccc---------------c--cchhhHHHHHhcCCCCCceEEE
Confidence 368999999999999999999888 555553221110 0 0112233678899965 78899
Q ss_pred cccchhHHHHHHHHHHHHhcCCCCEEEEeeeccccCchhHH--h---------h-hcCcccC------------------
Q psy4744 130 DNSWTGGIEVLRQAVQDISEGRVDTAIVGVSNLLLNANLNS--L---------F-QGLNRLS------------------ 179 (270)
Q Consensus 130 ~~~cas~~~al~~A~~~i~~G~~d~~lv~g~~~~~~~~~~~--~---------~-~~~~~ls------------------ 179 (270)
+.+|+|++.||..|++.|++|++|+|||+|+|.+....... . + ..++...
T Consensus 96 ~~~~aSg~~ai~~A~~~I~sG~~~~vLv~G~e~~s~~~~~~~~~~~~~~~d~~~~~~~g~~~~~~~al~a~ry~~~yG~t 175 (430)
T PRK06365 96 EGGGATGGLAFQAGYEEIASGRMDCVAVYGFETMSHVNTWKGNEFIALASDTNFDYPLGGFYTGYYAMMAVRHMYEFGTT 175 (430)
T ss_pred eCCcHHHHHHHHHHHHHHHcCCCCEEEEEEeeecccccchhhhhhhcccccccccccccCccHHHHHHHHHHHHHHHCCC
Confidence 99999999999999999999999999999999754422100 0 0 0111100
Q ss_pred ------------CCCCCcccCCCC---------------------CceeecCeeEEEEecChHHHHhhcCceEeEEEecc
Q psy4744 180 ------------PDGKTRSFDHLA---------------------NGYARSEGIVVLLLQRSETALRSYGEVLHAESRFY 226 (270)
Q Consensus 180 ------------~~~~~~pfd~~~---------------------~g~~~geGA~alvL~~~~~A~~~~g~~~~~~~~~~ 226 (270)
.+...+||...+ +...++|||+|+||.+++.|++.....++....+.
T Consensus 176 ~e~la~vav~~~~~A~~NP~A~~~~~~t~e~v~~s~~i~~Plt~~d~~~~sDGAaAvvl~See~A~~l~~~pv~i~g~g~ 255 (430)
T PRK06365 176 VEQLAKVSVKNHGNAIHNPFAQSPMKITVEDVRKSPMVSYPLTRLDVCAMSDGAACAILASEDKAFEITDKPVLIKAIGT 255 (430)
T ss_pred HHHHHHHHHHHHHHHhhCcHhhcCCCCCHHHHhcCCccccCcchhhcCCcCCceEEEEEecHHHHHhcCCCCeEEEEEEE
Confidence 011123333222 22246899999999999999864112222222222
Q ss_pred CCCCCCC-c------------------------CCCHHHHHHHHHHHHHHcCCC--CCCccEEEcccC
Q psy4744 227 GSLERPF-V------------------------GFNQASLVEFFTNFYQKARVN--PGQVDFLEADGS 267 (270)
Q Consensus 227 ~~~~~~~-~------------------------~~~~~~~~~a~~~al~~agi~--~~did~v~~hgt 267 (270)
+...... . .........+.+++|+++||+ ++|||++|+|-.
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~AGl~~~~~DiD~~Ei~D~ 323 (430)
T PRK06365 256 GSDTLRLADRPFGEVPLLPNESPDDYKDLRYPGVHSFRAGRMAAKEAYEMAGITDPLNDLDLIELHDA 323 (430)
T ss_pred eccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHcCCCCCHHHCCEEEeecC
Confidence 2110000 0 012234568999999999997 799999999964
No 75
>PTZ00455 3-ketoacyl-CoA thiolase; Provisional
Probab=99.75 E-value=2.9e-17 Score=147.03 Aligned_cols=196 Identities=14% Similarity=0.146 Sum_probs=127.0
Q ss_pred HHHHHHHHHHHHHHHCCCCCCC--CCCCCeEEEEccCCCCccccccCccccchhhHhhhhhhhHHHHHH-------HHcC
Q psy4744 51 LVRCFIEPCFEAILDAGINPKS--LAGSNSSVYTNSCISDDESLGCDERLTTNFWLLAHVRCLLANRIA-------YLFD 121 (270)
Q Consensus 51 ~~~l~l~a~~~Al~dAg~~~~~--~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia-------~~~g 121 (270)
...|+.+++++||+|+|+++++ |+ ++++|+..+.... . ...++..+. ..+|
T Consensus 48 ~~eL~~~a~~~al~~agl~~~d~~ID----~vi~G~~~~~~~~--------------~--~~~~a~~~~~~~gl~~~~~g 107 (438)
T PTZ00455 48 LEELLATAIQGTLENTGLDGKAALVD----KVVVGNFLGELFS--------------S--QGHLGPAAVGSLGQSGASNA 107 (438)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCcC----EEEEEeccccccc--------------c--ccchHHHHHHhccCcccccc
Confidence 4679999999999999999988 88 5666654322100 0 011222233 3445
Q ss_pred CC-CCCccccccchhHHHHHHHHHHHHhcCCCCEEEEeeeccccCchhH--------------------------H----
Q psy4744 122 LK-GPSFTIDNSWTGGIEVLRQAVQDISEGRVDTAIVGVSNLLLNANLN--------------------------S---- 170 (270)
Q Consensus 122 l~-Gp~~~v~~~cas~~~al~~A~~~i~~G~~d~~lv~g~~~~~~~~~~--------------------------~---- 170 (270)
+. -|+++|+++|+||+.||..|+++|++|++|++||+|+|.+...... +
T Consensus 108 l~~~p~~~V~~~caSG~~Ai~~A~~~I~sG~~dvvlv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 187 (438)
T PTZ00455 108 LLYKPAMRVEGACASGGLAVQSAWEALLAGTSDIALVVGVEVQTTVSARVGGDYLARAADYRRQRKLDDFTFPCLFAKRM 187 (438)
T ss_pred cCCCceeEEECcCHHHHHHHHHHHHHHHCCCCCEEEEEEEeecccCcchhhhhhccchhhccccccccCcchHHHHHHHH
Confidence 54 4899999999999999999999999999999999999975432100 0
Q ss_pred -hhhcCcccC------------CCCCCcccCC--------------------------------CCCceeecCeeEEEEe
Q psy4744 171 -LFQGLNRLS------------PDGKTRSFDH--------------------------------LANGYARSEGIVVLLL 205 (270)
Q Consensus 171 -~~~~~~~ls------------~~~~~~pfd~--------------------------------~~~g~~~geGA~alvL 205 (270)
.+...+.++ .++..+|+.. --+...++|||+++||
T Consensus 188 ~ym~~~ggitrE~la~vAvka~~~a~~nP~A~~~~~~~t~~~~~d~~~~~~e~l~s~~i~~pl~~~d~s~~sDGAaA~vl 267 (438)
T PTZ00455 188 KYIQEHGHFTMEDTARVAAKAYANGNKNPLAHMHTRKLSLEFCTGASDKNPKFLGNETYKPFLRMTDCSQVSDGGAGLVL 267 (438)
T ss_pred HHHHHHCCCCHHHHHHHHHHHHHHHhcCCHhhccCCCCCceeeccccccchhhhcCCcccCcCchhcCCCccccceEEEE
Confidence 011111111 0111122211 1122246899999999
Q ss_pred cChHHHHhhcCceE----eEEEeccCCCCCCC-cCC----CHHHHHHHHHHHHHHcCCCCCCccEEEcccC
Q psy4744 206 QRSETALRSYGEVL----HAESRFYGSLERPF-VGF----NQASLVEFFTNFYQKARVNPGQVDFLEADGS 267 (270)
Q Consensus 206 ~~~~~A~~~~g~~~----~~~~~~~~~~~~~~-~~~----~~~~~~~a~~~al~~agi~~~did~v~~hgt 267 (270)
.+++.|++. +..+ .+++.+++...... ..| .......+++++|+++|++|+|||++|+|-.
T Consensus 268 ~See~A~~l-~~~p~~~~~v~i~g~~~~~~~~~~~~~~~~~~~~~~~A~~~a~~~AGl~~~DiD~~Ei~da 337 (438)
T PTZ00455 268 ASEEGLQKM-GLSPNDSRLVEIKSLACASGNLYEDPPDATRMFTSRAAAQKALSMAGVKPSDLQVAEVHDC 337 (438)
T ss_pred ecHHHHHhc-CCCCCCCccEEEEEEEEecCCcccCccccccchHHHHHHHHHHHHcCCCHHHCcEeeeccc
Confidence 999999875 4333 46666655432211 011 1222378999999999999999999999954
No 76
>PRK06289 acetyl-CoA acetyltransferase; Provisional
Probab=99.75 E-value=1.5e-17 Score=148.40 Aligned_cols=197 Identities=14% Similarity=0.119 Sum_probs=126.6
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCeEEEEccCCCCccccccCccccchhhHhhhhhhhHHHHHHHHcCCCC-CCccc
Q psy4744 51 LVRCFIEPCFEAILDAGINPKSLAGSNSSVYTNSCISDDESLGCDERLTTNFWLLAHVRCLLANRIAYLFDLKG-PSFTI 129 (270)
Q Consensus 51 ~~~l~l~a~~~Al~dAg~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl~G-p~~~v 129 (270)
...|+.+|+++||+|||+++++|| ++++++..+++... ......... . ...++.| |+++|
T Consensus 26 ~~eLa~eA~~~AL~dAgl~~~dID----~vi~g~~~~~~~~~------------~~~~~~~~~-~--~~~~~~g~~~~~v 86 (403)
T PRK06289 26 FADLTREVVDGTLAAAGVDADDIE----VVHVGNFFGELFAG------------QGHLGAMPA-T--VHPALWGVPASRH 86 (403)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC----EEEEEecccccccc------------ccccchHHH-H--HhhcCCCCceeec
Confidence 578999999999999999999998 67777654432110 000000011 1 1223322 88999
Q ss_pred cccchhHHHHHHHHHHHHhcCCCCEEEEeeeccccCchhH-----H----hhhcCc-----------ccC----------
Q psy4744 130 DNSWTGGIEVLRQAVQDISEGRVDTAIVGVSNLLLNANLN-----S----LFQGLN-----------RLS---------- 179 (270)
Q Consensus 130 ~~~cas~~~al~~A~~~i~~G~~d~~lv~g~~~~~~~~~~-----~----~~~~~~-----------~ls---------- 179 (270)
+++|+|++.||..|+.+|++|++|+|||+|+|.+...... . .+...+ .+.
T Consensus 87 ~~~Casg~~al~~Aa~~I~sG~~~~VLvvg~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~a~~y~~~yG~ 166 (403)
T PRK06289 87 EAACASGSVATLAAMADLRAGRYDVALVVGVELMKTVPGDVAAEHLGAAAWTGHEGQDARFPWPSMFARVADEYDRRYGL 166 (403)
T ss_pred ccccHHHHHHHHHHHHHHHcCCCCEEEEEEEEecCCCCchhhHHhhhcccccccccccCCCccHHHHHHHHHHHHHHhCC
Confidence 9999999999999999999999999999999875432110 0 000000 000
Q ss_pred -------------CCCCCcccCCCC--------------------------CceeecCeeEEEEecChHHHHhhcCc-eE
Q psy4744 180 -------------PDGKTRSFDHLA--------------------------NGYARSEGIVVLLLQRSETALRSYGE-VL 219 (270)
Q Consensus 180 -------------~~~~~~pfd~~~--------------------------~g~~~geGA~alvL~~~~~A~~~~g~-~~ 219 (270)
.+...+|+...+ +...++|||+++||.+++.|++. +. .+
T Consensus 167 t~e~la~va~~~~~~A~~NP~A~~~~~~~~~~~~~~d~~~s~~i~~Pl~~~d~~~~~DGAaA~vl~s~e~a~~l-~~~~~ 245 (403)
T PRK06289 167 DEEHLRAIAEINFANARRNPNAQTRGWAFPDEATNDDDATNPVVEGRLRRQDCSQVTDGGAGVVLASDAYLRDY-ADARP 245 (403)
T ss_pred CHHHHHHHHHHHHHHHccCcHhhcCccccccccchhhhhcCCcccCCCchhhcCCCCCceeEEEEEcHHHHHHh-ccCCC
Confidence 111122222211 12246899999999999999764 43 34
Q ss_pred eEEEeccCCCCCCC---c--------CCCHHHHHHHHHHHHHHcCCCCCCccEEEcccC
Q psy4744 220 HAESRFYGSLERPF---V--------GFNQASLVEFFTNFYQKARVNPGQVDFLEADGS 267 (270)
Q Consensus 220 ~~~~~~~~~~~~~~---~--------~~~~~~~~~a~~~al~~agi~~~did~v~~hgt 267 (270)
.+++.+++..+... . .........+.+++|++|||+++|||++|+|-.
T Consensus 246 ~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~a~~~Agi~~~Didv~el~D~ 304 (403)
T PRK06289 246 IPRIKGWGHRTAPLGLEQKLDRSAGDPYVLPHVRQAVLDAYRRAGVGLDDLDGFEVHDC 304 (403)
T ss_pred CEEEEEEEEeccccccccccccccccccccHHHHHHHHHHHHHcCCCHHHCeEEeeecc
Confidence 45666655432211 0 112344578999999999999999999999964
No 77
>cd00830 KAS_III Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems. It is found in bacteria and plants. Elongation of fatty acids in the type II systems occurs by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. KASIII initiates this process by specifically using acetyl-CoA over acyl-CoA.
Probab=99.74 E-value=4.8e-17 Score=141.08 Aligned_cols=177 Identities=16% Similarity=0.168 Sum_probs=127.5
Q ss_pred ChHHHHHHHHHHHHHHHCCCCCCCCCCCCeEEEEccCCCCccccccCccccchhhHhhhhhhhHHHHHHHHcCC-CCCCc
Q psy4744 49 DPLVRCFIEPCFEAILDAGINPKSLAGSNSSVYTNSCISDDESLGCDERLTTNFWLLAHVRCLLANRIAYLFDL-KGPSF 127 (270)
Q Consensus 49 ~~~~~l~l~a~~~Al~dAg~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl-~Gp~~ 127 (270)
.....|+.+|+++||+++|+++++++ .+++++...++. ....+.+++..+|+ +.|++
T Consensus 48 ~~~~~la~~A~~~al~~ag~~~~~Id----~li~~~~~~~~~------------------~~~~~~~l~~~lg~~~~~~~ 105 (320)
T cd00830 48 ETTSDLAVEAAKKALEDAGIDADDID----LIIVATSTPDYL------------------FPATACLVQARLGAKNAAAF 105 (320)
T ss_pred CCHHHHHHHHHHHHHHHcCCCHHHCC----EEEEEcCCCCCC------------------CCcHHHHHHHHhCCCCCcEe
Confidence 34678999999999999999988887 566766543321 12346779999999 56888
Q ss_pred cccccchhHHHHHHHHHHHHhcCCCCEEEEeeeccccCchhHHhhhcCcccCCCCCCcccCCCCCceeecCeeEEEEecC
Q psy4744 128 TIDNSWTGGIEVLRQAVQDISEGRVDTAIVGVSNLLLNANLNSLFQGLNRLSPDGKTRSFDHLANGYARSEGIVVLLLQR 207 (270)
Q Consensus 128 ~v~~~cas~~~al~~A~~~i~~G~~d~~lv~g~~~~~~~~~~~~~~~~~~ls~~~~~~pfd~~~~g~~~geGA~alvL~~ 207 (270)
.|+.+|+|++.||..|.++|++|.++.+||+++|.+.... .|+....+.++||||+|+||++
T Consensus 106 ~v~~~C~s~~~al~~A~~~i~~g~~~~vLvv~~e~~s~~~------------------~~~~~~~~~~~GDgAaA~ll~~ 167 (320)
T cd00830 106 DINAACSGFLYGLSTAAGLIRSGGAKNVLVVGAETLSRIL------------------DWTDRSTAVLFGDGAGAVVLEA 167 (320)
T ss_pred eccccchHHHHHHHHHHHHHHcCCCCEEEEEEehhhcccc------------------CcccCCceEEEeccceEEEEEe
Confidence 8999999999999999999999999999999999833211 0333456789999999999998
Q ss_pred hHHHHhhcCceEeEEEeccCCCCCCCc--------------------CC-C-------HHHHHHHHHHHHHHcCCCCCCc
Q psy4744 208 SETALRSYGEVLHAESRFYGSLERPFV--------------------GF-N-------QASLVEFFTNFYQKARVNPGQV 259 (270)
Q Consensus 208 ~~~A~~~~g~~~~~~~~~~~~~~~~~~--------------------~~-~-------~~~~~~a~~~al~~agi~~~di 259 (270)
.+... .+.......++...+... .. . .....++++++|+++|++++||
T Consensus 168 ~~~~~----~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~g~~~~di 243 (320)
T cd00830 168 TEEDP----GILDSVLGSDGSGADLLTIPAGGSRSPFEDAEGGDPYLVMDGREVFKFAVRLMPESIEEALEKAGLTPDDI 243 (320)
T ss_pred cCCCC----cEEEEEEEEcCCCCCeEEeCCCCcCCccccccccCccEEEcChHHHHHHHHhhHHHHHHHHHHcCCCHHHC
Confidence 65411 122222222221111000 00 0 1234688999999999999999
Q ss_pred cEEEcccCCC
Q psy4744 260 DFLEADGSAI 269 (270)
Q Consensus 260 d~v~~hgtgt 269 (270)
|++.+|..+.
T Consensus 244 ~~~~~h~~~~ 253 (320)
T cd00830 244 DWFVPHQANL 253 (320)
T ss_pred CEEEECCCCH
Confidence 9999998763
No 78
>TIGR02446 FadI fatty oxidation complex, beta subunit FadI. This subunit of the FadJI complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit, and YfcY. This protein is almost always located adjacent to FadJ (TIGR02440). The FadJI complex is needed for anaerobic beta-oxidation of short-chain fatty acids in E. coli.
Probab=99.74 E-value=4.1e-17 Score=145.92 Aligned_cols=93 Identities=13% Similarity=0.126 Sum_probs=74.8
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCeEEEEccCCCCccccccCccccchhhHhhhhhhhHHHHHHHHcCCC-C-CCcc
Q psy4744 51 LVRCFIEPCFEAILDAGINPKSLAGSNSSVYTNSCISDDESLGCDERLTTNFWLLAHVRCLLANRIAYLFDLK-G-PSFT 128 (270)
Q Consensus 51 ~~~l~l~a~~~Al~dAg~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl~-G-p~~~ 128 (270)
...|+.+++++||+|+|+++++|+ .+++|+..... ....++..++...|+. + |.++
T Consensus 31 ~~~L~~~a~~~al~~agl~~~~Id----~vi~G~~~~~~------------------~~~~~ar~~~l~aGl~~~~p~~~ 88 (430)
T TIGR02446 31 AVDLGKMVVSELLARSEIDPKLIE----QLVFGQVVQMP------------------EAPNIAREIVLGTGMNVHTDAYS 88 (430)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC----EEEEEeccCcC------------------ccchHHHHHHHhCCCCCCCchhh
Confidence 467999999999999999999888 56666543210 0122455566667885 3 8999
Q ss_pred ccccchhHHHHHHHHHHHHhcCCCCEEEEeeeccccC
Q psy4744 129 IDNSWTGGIEVLRQAVQDISEGRVDTAIVGVSNLLLN 165 (270)
Q Consensus 129 v~~~cas~~~al~~A~~~i~~G~~d~~lv~g~~~~~~ 165 (270)
|+++|+||+.|+..|+++|++|++|++||+|+|.+..
T Consensus 89 V~~~CaSG~~A~~~a~~~I~sG~~dvvla~G~E~mS~ 125 (430)
T TIGR02446 89 VTRACATSFQSAVNVAESIMAGAIDIGIAGGADSSSV 125 (430)
T ss_pred hhhhhhHHHHHHHHHHHHHHCCCCCEEEEeeeEcccC
Confidence 9999999999999999999999999999999998753
No 79
>PRK06059 lipid-transfer protein; Provisional
Probab=99.74 E-value=9.6e-17 Score=143.06 Aligned_cols=196 Identities=15% Similarity=0.147 Sum_probs=128.4
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCeEEEEccCCCCccccccCccccchhhHhhhhhhhHHHHHHHHcCCCC-CCccc
Q psy4744 51 LVRCFIEPCFEAILDAGINPKSLAGSNSSVYTNSCISDDESLGCDERLTTNFWLLAHVRCLLANRIAYLFDLKG-PSFTI 129 (270)
Q Consensus 51 ~~~l~l~a~~~Al~dAg~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl~G-p~~~v 129 (270)
...|+.+|+++||+|||+++++++ .+++++...... .....+..++..+|+++ |.+++
T Consensus 23 ~~~La~~A~~~Al~dAgl~~~dId----~vi~~~~~~~~~-----------------~~~~~a~~va~~lG~~~~~~~~v 81 (399)
T PRK06059 23 FVEYGVVAARAALADAGLDWRDVQ----LVVGADTIRNGY-----------------PGFVAGATFAQALGWNGAPVSSS 81 (399)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC----EEEEEeccCCcc-----------------CCccHHHHHHHHhCCCCCceecc
Confidence 478999999999999999888877 455554322110 00123456888999987 88999
Q ss_pred cccchhHHHHHHHHHHHHhcCCCCEEEEeeeccccCch--h--HH-----hhh---cCcccC------------------
Q psy4744 130 DNSWTGGIEVLRQAVQDISEGRVDTAIVGVSNLLLNAN--L--NS-----LFQ---GLNRLS------------------ 179 (270)
Q Consensus 130 ~~~cas~~~al~~A~~~i~~G~~d~~lv~g~~~~~~~~--~--~~-----~~~---~~~~ls------------------ 179 (270)
+++|+|++.+|..|+++|++|++|.+||+|+|.+.... . .. .+. ..+...
T Consensus 82 ~~~Casg~~al~~A~~~I~sG~~~~vLvvg~e~~s~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~al~a~~~~~~yg~s 161 (399)
T PRK06059 82 YAACASGSQALQSARAQILAGLCDVALVVGADTTPKGFFAPVGGERPDDPDWLRFHLIGATNPVYFALLARRRMDLYGAT 161 (399)
T ss_pred cchhHHHHHHHHHHHHHHHCCCCCEEEEEEEcccCCCCCcccccccccccchhhcccCCCccHHHHHHHHHHHHHHhCCC
Confidence 99999999999999999999999999999999754210 0 00 000 011100
Q ss_pred ------------CCCCCcccCCCC---------------------CceeecCeeEEEEecChHHHHhhc-CceEeEEEec
Q psy4744 180 ------------PDGKTRSFDHLA---------------------NGYARSEGIVVLLLQRSETALRSY-GEVLHAESRF 225 (270)
Q Consensus 180 ------------~~~~~~pfd~~~---------------------~g~~~geGA~alvL~~~~~A~~~~-g~~~~~~~~~ 225 (270)
.....+|+...+ +...++|||+++||.+++.|++.. +....+.+.+
T Consensus 162 ~e~~a~v~~~~~~~a~~Np~A~~r~~~t~e~v~~s~~i~~Pl~~~d~~~~~DGAaA~vl~s~~~A~~l~~~~~~~v~I~g 241 (399)
T PRK06059 162 VEDFAQVKVKNARHGLLNPNARYRKEVTVEDVLASPVVSDPLRLLDICATSDGAAALIVASKSFARRHLGSVAGVPSVRA 241 (399)
T ss_pred HHHHHHHHHHHHHHHccCcHhhcCCCCCHHHHhcCCcccCCCchhhcCCCCCceEEEEEecHHHHHhhccccCCceEEEE
Confidence 001122222211 333568999999999999887540 2233344444
Q ss_pred cCCCCCCC-----c-------------CCCHHHHHHHHHHHHHHcCCCCCCccEEEcccC
Q psy4744 226 YGSLERPF-----V-------------GFNQASLVEFFTNFYQKARVNPGQVDFLEADGS 267 (270)
Q Consensus 226 ~~~~~~~~-----~-------------~~~~~~~~~a~~~al~~agi~~~did~v~~hgt 267 (270)
.+...... . .+.......+.+++|+++|++++|||++|+|-.
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~a~~~a~~~agl~~~Did~~El~d~ 301 (399)
T PRK06059 242 ISTVTPRYPQHLPELPDIATDSTAAVPAPERVFKDQILDAAYAEAGIGPEDLSLAEVYDL 301 (399)
T ss_pred EEEecccccccccccccccccccccccccccHHHHHHHHHHHHHcCCCHHHCcEEeeccc
Confidence 44321110 0 011122357899999999999999999999965
No 80
>PRK08142 acetyl-CoA acetyltransferase; Provisional
Probab=99.73 E-value=6.2e-17 Score=143.04 Aligned_cols=189 Identities=13% Similarity=0.087 Sum_probs=127.2
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCeEEEEccCCCCccccccCccccchhhHhhhhhhhHHHHHHHHcCCCC-CCccc
Q psy4744 51 LVRCFIEPCFEAILDAGINPKSLAGSNSSVYTNSCISDDESLGCDERLTTNFWLLAHVRCLLANRIAYLFDLKG-PSFTI 129 (270)
Q Consensus 51 ~~~l~l~a~~~Al~dAg~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl~G-p~~~v 129 (270)
...|+.+|+++||+|||+++.+|| +++.+.. .. .. ....++..+|+++ |...+
T Consensus 25 ~~~L~~eA~~~Al~DAgl~~~dID----~~~~~~~---~~----------~~---------~~~~~~~~lGl~~~~~~~v 78 (388)
T PRK08142 25 VAQLHAEVAKGALADAGLSLADVD----GYFCAGD---AP----------GL---------GPASMVDYLGLKLRHVDST 78 (388)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC----EEEEcCC---CC----------Cc---------cHHHHHHhCCCCCeeeccc
Confidence 368999999999999999999998 3443110 00 00 0123788999965 67789
Q ss_pred cccchhHHHHHHHHHHHHhcCCCCEEEEeeeccccCch---h----HH------hh-hcCcccC----------------
Q psy4744 130 DNSWTGGIEVLRQAVQDISEGRVDTAIVGVSNLLLNAN---L----NS------LF-QGLNRLS---------------- 179 (270)
Q Consensus 130 ~~~cas~~~al~~A~~~i~~G~~d~~lv~g~~~~~~~~---~----~~------~~-~~~~~ls---------------- 179 (270)
+++|+|+..++..|++.|++|++|+|||++.+.+.... . +. .+ ...+...
T Consensus 79 ~~gg~s~~~a~~~A~~~I~sG~~d~vLvvg~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~Al~a~~ym~~yG 158 (388)
T PRK08142 79 ETGGSSYLAHVGHAAQAIAAGKCSVALITLAGRPRSEGSSGTEPRNWGADAPDAPFEAPYGPTTHNLYAMCAMRHMHEYG 158 (388)
T ss_pred cCCcHHHHHHHHHHHHHHHcCCCCEEEEEeeeecccCCccccccccccccccccchhcccccccHHHHHHHHHHHHHHHC
Confidence 99999999999999999999999999999988643210 0 00 00 0111110
Q ss_pred --------------CCCCCcccCCCC---------------------CceeecCeeEEEEecChHHHHhhcCceEeEEEe
Q psy4744 180 --------------PDGKTRSFDHLA---------------------NGYARSEGIVVLLLQRSETALRSYGEVLHAESR 224 (270)
Q Consensus 180 --------------~~~~~~pfd~~~---------------------~g~~~geGA~alvL~~~~~A~~~~g~~~~~~~~ 224 (270)
.+...+|+...+ +...++|||+++||.+++.|++. + .+.+.+.
T Consensus 159 ~t~e~la~vav~~~~~A~~NP~A~~r~~~t~e~vl~s~~Ia~Pl~l~d~~~~~DGAaA~vl~s~~~A~~l-~-~~~v~I~ 236 (388)
T PRK08142 159 TTSEQLAWIKVAASHHAQHNPHAMLRDVVTVEDVLNSPMIADPLHRLDCCVVTDGGGALVVVRPEIARSL-K-RPLVKVL 236 (388)
T ss_pred cCHHHHHHHHHHHHHHhccCChhhcCCCCCHHHHhcCCcccCCchhhccCcccCceEEEEEecHHHHhhc-C-CCCEEEE
Confidence 111233433222 33356999999999999999875 3 2335555
Q ss_pred ccCCCCCCC--cCC--CHHHHHHHHHHHHHHcCCCCCCccEEEcccC
Q psy4744 225 FYGSLERPF--VGF--NQASLVEFFTNFYQKARVNPGQVDFLEADGS 267 (270)
Q Consensus 225 ~~~~~~~~~--~~~--~~~~~~~a~~~al~~agi~~~did~v~~hgt 267 (270)
+.+...+.. ..+ .......+++++|++||++|+|||++|+|-.
T Consensus 237 g~~~~~~~~~~~~~~~~~~~~~~aa~~a~~~AGi~~~did~~elyD~ 283 (388)
T PRK08142 237 GAGEAIKGQMGGKVDLTYSGAAWSGPAAFAEAGVTPADIKYASIYDS 283 (388)
T ss_pred EEEEecCCccccCcccccHHHHHHHHHHHHHcCCCHHHCCEEEEecc
Confidence 555432211 112 2345578999999999999999999999964
No 81
>PRK09258 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=99.73 E-value=1.1e-16 Score=139.93 Aligned_cols=192 Identities=19% Similarity=0.194 Sum_probs=130.9
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCeEEEEccCCCCccccccCccccchhhHhhhhhhhHHHHHHHHcCCCC--CCcc
Q psy4744 51 LVRCFIEPCFEAILDAGINPKSLAGSNSSVYTNSCISDDESLGCDERLTTNFWLLAHVRCLLANRIAYLFDLKG--PSFT 128 (270)
Q Consensus 51 ~~~l~l~a~~~Al~dAg~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl~G--p~~~ 128 (270)
...|+.+|+++||+++|+++++|+ .+++++...++. ....+..++..+|+.. +.+.
T Consensus 61 ~~~la~~Aa~~aL~~ag~~~~~Id----~li~~s~~~~~~------------------~p~~a~~v~~~lgl~~~~~~~~ 118 (338)
T PRK09258 61 LSDGAIAAGRKALAEAGIDPSDIG----LLINTSVCRDYL------------------EPATACRVHHNLGLPKSCANFD 118 (338)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC----EEEEEcCCCCCC------------------CChHHHHHHHHcCCCCCCceee
Confidence 568999999999999999988887 577776543331 1235677999999963 7788
Q ss_pred ccccchhHHHHHHHHHHHHhcCCCCEEEEeeeccccCchhHHhhhcCcccCCCCCCcccCCCCCceeecCeeEEEEecCh
Q psy4744 129 IDNSWTGGIEVLRQAVQDISEGRVDTAIVGVSNLLLNANLNSLFQGLNRLSPDGKTRSFDHLANGYARSEGIVVLLLQRS 208 (270)
Q Consensus 129 v~~~cas~~~al~~A~~~i~~G~~d~~lv~g~~~~~~~~~~~~~~~~~~ls~~~~~~pfd~~~~g~~~geGA~alvL~~~ 208 (270)
|+.+|+|++.||..|.++|++|.++.+||+++|.... ..-..+..+ ..+.....+|+.....+.+||||+|+||++.
T Consensus 119 v~~~C~~~~~al~~A~~~i~~g~~~~~Lvv~~e~~s~-~~~~~~~~~--~~~~~~~~~~~~~~~~~~~GDGA~A~ll~~~ 195 (338)
T PRK09258 119 VSNACLGFLNGMLDAANMIELGQIDYALVVSGESARE-IVEATIDRL--LAPETTREDFAQSFATLTLGSGAAAAVLTRG 195 (338)
T ss_pred hhhhhHHHHHHHHHHHHHHHcCCCCEEEEEEecccch-hccchhhhh--ccCccchhhhhhccceEEecccceEEEEecC
Confidence 9999999999999999999999999999999998432 211111111 1222223567777778899999999999975
Q ss_pred HHHHhhcCceEeEEEeccCCCCCC------CcCCCH--------HHHHHHHHHHHHHcCCCCCCccEEEcccCC
Q psy4744 209 ETALRSYGEVLHAESRFYGSLERP------FVGFNQ--------ASLVEFFTNFYQKARVNPGQVDFLEADGSA 268 (270)
Q Consensus 209 ~~A~~~~g~~~~~~~~~~~~~~~~------~~~~~~--------~~~~~a~~~al~~agi~~~did~v~~hgtg 268 (270)
+...+. ..........++...+. ....+. ....++++++|+++|++++|||++-+|-.+
T Consensus 196 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~g~~~~did~~i~H~~~ 268 (338)
T PRK09258 196 SLHPRG-HRLLGGVTRAATEHHELCQGGRDGMRTDAVGLLKEGVELAVDTWEAFLAQLGWAVEQVDRVICHQVG 268 (338)
T ss_pred CCCCCc-ceeeeeeeecCCCcccccccCccceEEcHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEecCCCC
Confidence 431111 01111111111111110 000111 224568899999999999999999999865
No 82
>PRK12879 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=99.71 E-value=3.2e-16 Score=136.23 Aligned_cols=179 Identities=14% Similarity=0.125 Sum_probs=122.4
Q ss_pred hHHHHHHHHHHHHHHHCCCCCCCCCCCCeEEEEccCCCCccccccCccccchhhHhhhhhhhHHHHHHHHcCCC-CCCcc
Q psy4744 50 PLVRCFIEPCFEAILDAGINPKSLAGSNSSVYTNSCISDDESLGCDERLTTNFWLLAHVRCLLANRIAYLFDLK-GPSFT 128 (270)
Q Consensus 50 ~~~~l~l~a~~~Al~dAg~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl~-Gp~~~ 128 (270)
....|+.+|+++||+++|+++++++ .+++++...++. ....+.+++..+|++ .+.+.
T Consensus 52 ~~~~la~~A~~~al~~ag~~~~~Id----~li~~~~~~~~~------------------~~~~a~~l~~~lg~~~~~~~~ 109 (325)
T PRK12879 52 YTSDLAIKAAERALARAGLDAEDID----LIIVATTTPDYL------------------FPSTASQVQARLGIPNAAAFD 109 (325)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCC----EEEEEcCCCCCC------------------CChHHHHHHHHhCCCCCcEEE
Confidence 3678999999999999999988877 566766543321 123567799999996 48888
Q ss_pred ccccchhHHHHHHHHHHHHhcCCCCEEEEeeeccccCchhHHhhhcCcccCCCCCCcccCCCCCceeecCeeEEEEecCh
Q psy4744 129 IDNSWTGGIEVLRQAVQDISEGRVDTAIVGVSNLLLNANLNSLFQGLNRLSPDGKTRSFDHLANGYARSEGIVVLLLQRS 208 (270)
Q Consensus 129 v~~~cas~~~al~~A~~~i~~G~~d~~lv~g~~~~~~~~~~~~~~~~~~ls~~~~~~pfd~~~~g~~~geGA~alvL~~~ 208 (270)
|+.+|++++.||..|.++|++|.++.+||+++|.+.... .++......++||||+|+||++.
T Consensus 110 v~~~C~~~~~al~~A~~~l~~g~~~~~Lvv~~e~~s~~~------------------~~~~~~~~~~~GDgAaA~ll~~~ 171 (325)
T PRK12879 110 INAACAGFLYGLETANGLITSGLYKKVLVIGAERLSKVT------------------DYTDRTTCILFGDGAGAVVLEAT 171 (325)
T ss_pred ECccchHHHHHHHHHHHHHHcCCCCEEEEEEehhhcCcC------------------CccccCceEEEeecceEEEEEec
Confidence 999999999999999999999999999999999732110 01112345789999999999976
Q ss_pred HHHHhhcCceE--------eEEEeccCCCCCC-------CcCCC--------HHHHHHHHHHHHHHcCCCCCCccEEEcc
Q psy4744 209 ETALRSYGEVL--------HAESRFYGSLERP-------FVGFN--------QASLVEFFTNFYQKARVNPGQVDFLEAD 265 (270)
Q Consensus 209 ~~A~~~~g~~~--------~~~~~~~~~~~~~-------~~~~~--------~~~~~~a~~~al~~agi~~~did~v~~h 265 (270)
+.......... ...+.+.+..... ....+ .....++++++|+++|++++|||+|.+|
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~~did~~~~h 251 (325)
T PRK12879 172 ENEPGFIDYVLGTDGDGGDILYRTGLGTTMDRDALSGDGYIVQNGREVFKWAVRTMPKGARQVLEKAGLTKDDIDWVIPH 251 (325)
T ss_pred CCCCCeEEEEEEEcCCCCCeEEEcCCCCCCCccccccCccEEEcCHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEC
Confidence 53211100000 0011111111000 00001 1224578899999999999999999999
Q ss_pred cCC
Q psy4744 266 GSA 268 (270)
Q Consensus 266 gtg 268 (270)
-.+
T Consensus 252 ~~~ 254 (325)
T PRK12879 252 QAN 254 (325)
T ss_pred CCC
Confidence 654
No 83
>cd00826 nondecarbox_cond_enzymes nondecarboxylating condensing enzymes; In general, thiolases catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=99.71 E-value=3.6e-16 Score=138.79 Aligned_cols=195 Identities=15% Similarity=0.148 Sum_probs=127.6
Q ss_pred hHHHHHHHHHHHHHHHCCCCCCCCCCCCeEEEEccCCCCccccccCccccchhhHhhhhhhhHHH-HHHHHcCCCC-CCc
Q psy4744 50 PLVRCFIEPCFEAILDAGINPKSLAGSNSSVYTNSCISDDESLGCDERLTTNFWLLAHVRCLLAN-RIAYLFDLKG-PSF 127 (270)
Q Consensus 50 ~~~~l~l~a~~~Al~dAg~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~-~ia~~~gl~G-p~~ 127 (270)
...+|+.+++++||+++|+++++|+ .|++|+...++.. . .++. .+...+|+.+ |++
T Consensus 22 ~~~el~~~a~~~Al~~agl~p~dID----~vi~g~~~~~~~g-----------------~-~~~~~~~~~~lg~~~~p~~ 79 (393)
T cd00826 22 LAHEAGAKAIAAALEPAGVAAGAVE----EACLGQVLGAGEG-----------------Q-NCAQQAAMHAGGLQEAPAI 79 (393)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCC----EEEEEEccCCccc-----------------C-cHHHHHHHHcCCCCCCcEE
Confidence 3567899999999999999998888 6778766544310 0 1111 1455567754 999
Q ss_pred cccccchhHHHHHHHHHHHHhcCCCCEEEEeeeccccCchh-------HHh-hhcCc-----------------------
Q psy4744 128 TIDNSWTGGIEVLRQAVQDISEGRVDTAIVGVSNLLLNANL-------NSL-FQGLN----------------------- 176 (270)
Q Consensus 128 ~v~~~cas~~~al~~A~~~i~~G~~d~~lv~g~~~~~~~~~-------~~~-~~~~~----------------------- 176 (270)
+|+++|+|++.++..|+++|++|++|++||+|+|.+..... ... ....+
T Consensus 80 ~V~~~Casg~~al~~A~~~I~sG~~~~vlv~g~e~~s~~~~~~~~~~~~~~~~~~~~~r~~~~~~a~~s~~~~~~~~~~G 159 (393)
T cd00826 80 GMNNLCGSGLRALALAMQLIAGGDANCILAGGFEKMETSAENNAKEKHIDVLINKYGMRACPDAFALAGQAGAEAAEKDG 159 (393)
T ss_pred EecchhHHHHHHHHHHHHHHHCCCCCEEEEEeeeccccCcccccccchhHHHHHHhCChhhccHHHHHHHHHHHHHHHcC
Confidence 99999999999999999999999999999999997543210 000 00011
Q ss_pred ccC--------CC------CCCcccCCCC------------------------CceeecCeeEEEEecChHHHHhhcCc-
Q psy4744 177 RLS--------PD------GKTRSFDHLA------------------------NGYARSEGIVVLLLQRSETALRSYGE- 217 (270)
Q Consensus 177 ~ls--------~~------~~~~pfd~~~------------------------~g~~~geGA~alvL~~~~~A~~~~g~- 217 (270)
... .+ ...+|+...+ +...++|||+++||.+++.|++. +.
T Consensus 160 ~~~e~~a~v~~~~~~~~~~a~~np~a~~~~~~t~e~~~~~~~i~~~~~pl~~~~~~~~~DGAAA~vl~S~~~a~~l-~l~ 238 (393)
T cd00826 160 RFKDEFAKFGVKGRKGDIHSDADEYIQFGDEASLDEIAKLRPAFDKEDFLTAGNACGLNDGAAAAILMSEAEAQKH-GLQ 238 (393)
T ss_pred CCHHHEEEEEEecCCCCEEEecCCCCCCCCCCCHHHHhcCCCccCCCCCEechhcCCcCCCeEEEEEecHHHHHHc-CCc
Confidence 000 01 0112332211 12235899999999999999864 42
Q ss_pred ------eEeEEEeccCCCCCC-C--cCCCHHHHHHHHHHHHHHcCCCCCCccEEEcccC
Q psy4744 218 ------VLHAESRFYGSLERP-F--VGFNQASLVEFFTNFYQKARVNPGQVDFLEADGS 267 (270)
Q Consensus 218 ------~~~~~~~~~~~~~~~-~--~~~~~~~~~~a~~~al~~agi~~~did~v~~hgt 267 (270)
...+.+......... . ......+...+++++|++|||+++|||++|+|-.
T Consensus 239 ~~~v~i~~~a~~~~~~~~~~~~~~~~~~~~~~~~~A~~~al~~Agi~~~DID~~Ei~d~ 297 (393)
T cd00826 239 SKAREIQALEMITDMASTFEDKKVIKMVGGDGPIEAARKALEKAGLGIGDLDLIEAHDA 297 (393)
T ss_pred ccccccceEEEEEeeeccccCccccccccceeHHHHHHHHHHHcCCCHHHcCeeehhhh
Confidence 223333333221110 0 0012344689999999999999999999999953
No 84
>PRK06504 acetyl-CoA acetyltransferase; Provisional
Probab=99.71 E-value=1.5e-16 Score=140.64 Aligned_cols=193 Identities=13% Similarity=0.107 Sum_probs=124.8
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCCeEEEEccCCCCccccccCccccchhhHhhhhhhhHHHHHHHHcCC--CCCCccc
Q psy4744 52 VRCFIEPCFEAILDAGINPKSLAGSNSSVYTNSCISDDESLGCDERLTTNFWLLAHVRCLLANRIAYLFDL--KGPSFTI 129 (270)
Q Consensus 52 ~~l~l~a~~~Al~dAg~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl--~Gp~~~v 129 (270)
..|+.+++++||+|+|+++++|+ .+++|+...... ....++..+...-|| .-|.++|
T Consensus 27 ~~L~~~a~~~al~~a~l~~~~Id----~vi~G~~~~~~~-----------------~~~~~ar~~~l~~gl~~~vP~~tV 85 (390)
T PRK06504 27 ADLAAQVLDALVDRSGADPALIE----DVIMGCVSQVGE-----------------QATNVARNAVLASKLPESVPGTSI 85 (390)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC----EEEEEecccccc-----------------ccccHHHHHHHHcCCCCCCceEEE
Confidence 67899999999999999999998 566665431100 000122222223344 4599999
Q ss_pred cccchhHHHHHHHHHHHHhcCCCCEEEEeeeccccCchhH--H--------------hhhc-Cc--ccC-----------
Q psy4744 130 DNSWTGGIEVLRQAVQDISEGRVDTAIVGVSNLLLNANLN--S--------------LFQG-LN--RLS----------- 179 (270)
Q Consensus 130 ~~~cas~~~al~~A~~~i~~G~~d~~lv~g~~~~~~~~~~--~--------------~~~~-~~--~ls----------- 179 (270)
+.+|+||+.|+..|++.|++|++|++||+|+|.+...... . .+.. .. ..+
T Consensus 86 ~~~CaSG~~Ai~~A~~~I~sG~~dvvLagGvEsmS~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aae~~a~~ 165 (390)
T PRK06504 86 DRQCGSSQQALHFAAQAVMSGTMDIVIAAGVESMTRVPMGSPSTLPAKNGLGHYKSPGMEERYPGIQFSQFTGAEMMAKK 165 (390)
T ss_pred echhhHHHHHHHHHHHHHHCCCCCEEEEeeeeecCCCccccccccccccccccccccccccccCCCCCCHHHHHHHHHHH
Confidence 9999999999999999999999999999999986542210 0 0000 00 000
Q ss_pred ----------------------C-CC-------------------------------------CCcccCC-----CCCce
Q psy4744 180 ----------------------P-DG-------------------------------------KTRSFDH-----LANGY 194 (270)
Q Consensus 180 ----------------------~-~~-------------------------------------~~~pfd~-----~~~g~ 194 (270)
+ .+ ..+|... -.+..
T Consensus 166 ygisre~~d~~A~ksh~~A~~a~~ag~f~~ei~p~~~~~~~~~~~~~~~De~~r~~~t~e~l~~~~~~~~~g~lt~~n~s 245 (390)
T PRK06504 166 YGLSKDQLDEFALQSHQRAIAATQAGKFKAEIVPLEITRADGSGEMHTVDEGIRFDATLEGIAGVKLIAEGGRLTAATAS 245 (390)
T ss_pred hCcCHHHHHHHHHHHHHHHHHhHHcCCCccccccccccCCCCCceEEccCCCCCCCCCHHHHhcCCCCCCCCCCcCccCC
Confidence 0 00 0111110 01223
Q ss_pred eecCeeEEEEecChHHHHhhcCceEeEEEeccCCCCCCCcCCCHHHHHHHHHHHHHHcCCCCCCccEEEcccC
Q psy4744 195 ARSEGIVVLLLQRSETALRSYGEVLHAESRFYGSLERPFVGFNQASLVEFFTNFYQKARVNPGQVDFLEADGS 267 (270)
Q Consensus 195 ~~geGA~alvL~~~~~A~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~agi~~~did~v~~hgt 267 (270)
.++|||+++||.+++.|++. +..+..++.+++..... ......+...+++++|+++|++|+|||++|+|-.
T Consensus 246 ~~~DGAaA~vl~s~~~A~~l-~~~p~~~i~~~~~~~~~-~~~~~~~~~~a~~~a~~~agl~~~Did~~Ei~d~ 316 (390)
T PRK06504 246 QICDGASGVMVVNERGLKAL-GVKPLARIHHMTVIGGD-PVIMLEAPLPATERALKKAGMKIDDIDLYEVNEA 316 (390)
T ss_pred CCCCceEEEEEecHHHHHHc-CCCceEEEEEEEEeecC-chhhhccHHHHHHHHHHHcCCCHHHCCEEEeccc
Confidence 46899999999999999875 44444445444422111 1112235567999999999999999999999964
No 85
>PRK06025 acetyl-CoA acetyltransferase; Provisional
Probab=99.70 E-value=1.8e-16 Score=139.87 Aligned_cols=192 Identities=17% Similarity=0.143 Sum_probs=133.7
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCCeEEEEccCCCCccccccCccccchhhHhhhhhhhHHHHHHHHcCC--CCCCccc
Q psy4744 52 VRCFIEPCFEAILDAGINPKSLAGSNSSVYTNSCISDDESLGCDERLTTNFWLLAHVRCLLANRIAYLFDL--KGPSFTI 129 (270)
Q Consensus 52 ~~l~l~a~~~Al~dAg~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl--~Gp~~~v 129 (270)
..|+..+.+++|+++|+++.+++. |++|.....-. ...+++..++..-|| +-|.++|
T Consensus 30 ~~L~~~~~~~~l~r~~i~~~~id~----vi~G~~~~~g~-----------------~g~n~aR~~al~aglp~~vp~~tv 88 (417)
T PRK06025 30 QHLAATVLKALAERNGLNTADVDD----IIWSTSSQRGK-----------------QGGDLGRMAALDAGYDIKASGVTL 88 (417)
T ss_pred HHHHHHHHHHHHHhcCCCHHHCCE----EEEEcCCCcCc-----------------ccCcHHHHHHHhCCCCCCCCeeee
Confidence 457788999999999999988884 55554422100 012356666667777 4599999
Q ss_pred cccchhHHHHHHHHHHHHhcCCCCEEEEeeeccccCchhHH------h-----hhc--C---ccc---C-----------
Q psy4744 130 DNSWTGGIEVLRQAVQDISEGRVDTAIVGVSNLLLNANLNS------L-----FQG--L---NRL---S----------- 179 (270)
Q Consensus 130 ~~~cas~~~al~~A~~~i~~G~~d~~lv~g~~~~~~~~~~~------~-----~~~--~---~~l---s----------- 179 (270)
+..|+||+.||.+|++.|++|++|++|+||+|.++....+. . ... . ... +
T Consensus 89 nr~C~Sgl~ai~~aa~~I~~G~~~~~laGG~EsmS~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Mg~~ae~~a~~ 168 (417)
T PRK06025 89 DRFCGGGITSVNLAAAQIMSGMEDLVIAGGTEMMSYTAAMAAEDMAAGKPPLGMGSGNLRLRALHPQSHQGVCGDAIATM 168 (417)
T ss_pred ccccchHHHHHHHHHHHHHcCCCCEEEEeeeeccCCCcccccccccCCCCcccccccCcccccccCCCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999877543210 0 000 0 000 0
Q ss_pred ---------------------------------C------------CCCCc------------c-cCC------CCCce-
Q psy4744 180 ---------------------------------P------------DGKTR------------S-FDH------LANGY- 194 (270)
Q Consensus 180 ---------------------------------~------------~~~~~------------p-fd~------~~~g~- 194 (270)
| ++..| | |.+ ..+|.
T Consensus 169 ~~isRe~~D~~A~~Sh~rA~~A~~~G~f~~eIvPv~~~~~~~~~~~De~~R~~~t~e~la~L~p~F~~~~~~~~~~~g~~ 248 (417)
T PRK06025 169 EGITREALDALGLESQRRAARAIKEGRFDKSLVPVYRDDGSVALDHEEFPRPQTTAEGLAALKPAFTAIADYPLDDKGTT 248 (417)
T ss_pred hCCCHHHHHHHHHHHHHHHHHHHHcCCCcCeEeeEEcCCCCEEecCCCCCCCCCCHHHHcCCCCCccccccccccCCccc
Confidence 0 11111 1 431 01243
Q ss_pred ------------------------eecCeeEEEEecChHHHHhhcCceEeEEEeccCCCCCCCcCCCHHHHHHHHHHHHH
Q psy4744 195 ------------------------ARSEGIVVLLLQRSETALRSYGEVLHAESRFYGSLERPFVGFNQASLVEFFTNFYQ 250 (270)
Q Consensus 195 ------------------------~~geGA~alvL~~~~~A~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~ 250 (270)
.++|||+++||++++.|+++ +..+++++.+++...... .....+...+++++|+
T Consensus 249 ~~~~~~~~~~~~~~~~~vTagNss~~sDGAAAvVL~See~A~~l-g~~p~a~I~g~~~a~~~p-~~~~~~p~~Ai~~aL~ 326 (417)
T PRK06025 249 YRGLINQKYPDLEIKHVHHAGNSSGVVDGAAALLLASKAYAEKH-GLKPRARIVAMANMGDDP-TLMLNAPVPAAKKVLA 326 (417)
T ss_pred cccccccccccccccccccccccCCCCcceEEEEEecHHHHHHc-CCCCcEEEEEEEEecCCc-hhhcccHHHHHHHHHH
Confidence 35899999999999999887 777788888877643221 1112345789999999
Q ss_pred HcCCCCCCccEEEccc
Q psy4744 251 KARVNPGQVDFLEADG 266 (270)
Q Consensus 251 ~agi~~~did~v~~hg 266 (270)
++|++++|||++|.|=
T Consensus 327 ~AGl~~~DID~~ei~e 342 (417)
T PRK06025 327 KAGLTKDDIDLWEINE 342 (417)
T ss_pred HcCCCHHHCcEEEEch
Confidence 9999999999999983
No 86
>PRK07801 acetyl-CoA acetyltransferase; Provisional
Probab=99.70 E-value=2.3e-16 Score=139.84 Aligned_cols=194 Identities=14% Similarity=0.102 Sum_probs=125.3
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCeEEEEccCCCCccccccCccccchhhHhhhhhhhHHHHHHHHcCC--CCCCcc
Q psy4744 51 LVRCFIEPCFEAILDAGINPKSLAGSNSSVYTNSCISDDESLGCDERLTTNFWLLAHVRCLLANRIAYLFDL--KGPSFT 128 (270)
Q Consensus 51 ~~~l~l~a~~~Al~dAg~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl--~Gp~~~ 128 (270)
...|+.+++++||+|+|+++++|| +|++|+....-. . ...++..+....|+ ..|.++
T Consensus 26 ~~~L~~~a~~~al~dagl~~~~ID----~vv~g~~~~~~~-~----------------~~~~~~~~~l~~gl~~~~p~~~ 84 (382)
T PRK07801 26 PADLGAHVLKGLVDRTGIDPAAVD----DVIFGCVDTIGP-Q----------------AGNIARTSWLAAGLPEEVPGVT 84 (382)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHcC----EEEEEeeccCCc-c----------------cccHHHHHHHHcCCCCCCceee
Confidence 467999999999999999999998 677764311000 0 00112222223444 458889
Q ss_pred ccccchhHHHHHHHHHHHHhcCCCCEEEEeeeccccC-ch--h--HH---h----------h-hcCcc--cC--------
Q psy4744 129 IDNSWTGGIEVLRQAVQDISEGRVDTAIVGVSNLLLN-AN--L--NS---L----------F-QGLNR--LS-------- 179 (270)
Q Consensus 129 v~~~cas~~~al~~A~~~i~~G~~d~~lv~g~~~~~~-~~--~--~~---~----------~-~~~~~--ls-------- 179 (270)
|+++|+||+.++..|+++|++|++|++||+|++.+.. +. . .. . + ...+. .+
T Consensus 85 v~~acaSg~~Av~~Aa~~I~sG~~d~vLv~G~e~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~a~~~ 164 (382)
T PRK07801 85 VDRQCGSSQQAIHFAAQAVMSGTQDLVVAGGVQNMSQIPISSAMTAGEQLGFTSPFAESKGWLHRYGDQEVSQFRGAELI 164 (382)
T ss_pred ecchhhhHHHHHHHHHHHHHCCCCCEEEEcchhhhcCCcccccccccccccCCcccccCcchhhhccCCCCCHHHHHHHH
Confidence 9999999999999999999999999999999986533 21 0 00 0 0 01110 00
Q ss_pred -------------------------CCC-CC----cccC----------------------------CCCCceeecCeeE
Q psy4744 180 -------------------------PDG-KT----RSFD----------------------------HLANGYARSEGIV 201 (270)
Q Consensus 180 -------------------------~~~-~~----~pfd----------------------------~~~~g~~~geGA~ 201 (270)
+.. .. -|++ ...+...++|||+
T Consensus 165 ~~~yG~tre~~a~vav~~~~~a~~n~~ag~~~~~~~p~~~~~~d~~~~~~t~e~~~~~~~i~~~~pl~~~d~~~~~DGaa 244 (382)
T PRK07801 165 AEKWGISREEMERFALESHRRAFAAIRAGRFDNEIVPVGGVTVDEGPRETSLEKMAGLKPLVEGGRLTAAVASQISDGAS 244 (382)
T ss_pred HHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccccCccccCCcCcCCHHHHhcCCCCCCCCCcccccCCCCCCceE
Confidence 000 00 0111 0123335689999
Q ss_pred EEEecChHHHHhhcCceEeEEEeccCCCCCCCcCCCHHHHHHHHHHHHHHcCCCCCCccEEEcccC
Q psy4744 202 VLLLQRSETALRSYGEVLHAESRFYGSLERPFVGFNQASLVEFFTNFYQKARVNPGQVDFLEADGS 267 (270)
Q Consensus 202 alvL~~~~~A~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~agi~~~did~v~~hgt 267 (270)
++||++++.|++. +..+.+++.+++....... ....+...+++++|+++|++|+|||++|+|-.
T Consensus 245 a~il~s~e~a~~~-~~~~~~~i~~~~~~~~~~~-~~~~~~~~a~~~a~~~agi~~~did~~e~~d~ 308 (382)
T PRK07801 245 AVLLASERAVKRH-GLTPRARIHHLSVRGDDPV-FMLTAPIPATRYALEKTGLSIDDIDVVEINEA 308 (382)
T ss_pred EEEEecHHHHHHC-CCCccEEEEEEEEecCChH-hhccChHHHHHHHHHHcCCCHHHcCEeeeccc
Confidence 9999999999876 6556667766553321110 01123357999999999999999999999963
No 87
>PRK09268 acetyl-CoA acetyltransferase; Provisional
Probab=99.69 E-value=7.5e-16 Score=137.80 Aligned_cols=93 Identities=13% Similarity=0.188 Sum_probs=71.8
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCeEEEEccCCCCccccccCccccchhhHhhhhhhhHHHHHHHH--cCCCCCCcc
Q psy4744 51 LVRCFIEPCFEAILDAGINPKSLAGSNSSVYTNSCISDDESLGCDERLTTNFWLLAHVRCLLANRIAYL--FDLKGPSFT 128 (270)
Q Consensus 51 ~~~l~l~a~~~Al~dAg~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~--~gl~Gp~~~ 128 (270)
...|+.+++++||+|+|+++.+|+ .+++|+...... ...++..++.. ++...|+++
T Consensus 31 ~~eL~~~a~~~al~~agl~~~~Id----~vv~G~~~~~~~------------------~~~~~r~~~l~~gl~~~~p~~~ 88 (427)
T PRK09268 31 NQDMLTAALDGLVDRFGLQGERLG----EVVAGAVLKHSR------------------DFNLTRECVLGSALSPYTPAYD 88 (427)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC----EEEEEecccCCc------------------cccHHHHHHHHcCCCCCCceee
Confidence 467999999999999999999998 566664332100 00123333344 444679999
Q ss_pred ccccchhHHHHHHHHHHHHhcCCCCEEEEeeeccccC
Q psy4744 129 IDNSWTGGIEVLRQAVQDISEGRVDTAIVGVSNLLLN 165 (270)
Q Consensus 129 v~~~cas~~~al~~A~~~i~~G~~d~~lv~g~~~~~~ 165 (270)
|+++|+||+.++..|+++|++|++|++||+|+|.+..
T Consensus 89 V~~~CaSG~~ai~~A~~~I~sG~~d~vlvgG~E~ms~ 125 (427)
T PRK09268 89 LQQACGTGLEAAILVANKIALGQIDSGIAGGVDTTSD 125 (427)
T ss_pred eechhhHHHHHHHHHHHHHHCCCCCEEEEeeEEccCC
Confidence 9999999999999999999999999999999997653
No 88
>PRK06690 acetyl-CoA acetyltransferase; Provisional
Probab=99.68 E-value=1.3e-15 Score=133.11 Aligned_cols=187 Identities=14% Similarity=0.137 Sum_probs=124.9
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCCeEEEEccCCCCccccccCccccchhhHhhhhhhhHHHHHHHHcCCC--CCCccc
Q psy4744 52 VRCFIEPCFEAILDAGINPKSLAGSNSSVYTNSCISDDESLGCDERLTTNFWLLAHVRCLLANRIAYLFDLK--GPSFTI 129 (270)
Q Consensus 52 ~~l~l~a~~~Al~dAg~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl~--Gp~~~v 129 (270)
..|+..+.+++++ |++ ++|+ .|++|+..+.. ..++..++...|+. -|+++|
T Consensus 26 ~~L~~~a~~~~~~--gi~-~~Id----~vi~G~~~~~~--------------------~~~~r~~~~~~Gl~~~~p~~tV 78 (361)
T PRK06690 26 QQLAAPLLTFLSK--GME-REID----DVILGNVVGPG--------------------GNVARLSALEAGLGLHIPGVTI 78 (361)
T ss_pred HHHHHHHHHHHHc--cch-hhcC----EEEEEecCCCc--------------------chHHHHHHHHcCCCCCCCceeh
Confidence 5688888888744 885 6777 57777543221 12333467778885 499999
Q ss_pred cccchhHHHHHHHHHHHHhcCCCCEEEEeeeccccCchhH--Hhh-----h--cCccc----------C-----------
Q psy4744 130 DNSWTGGIEVLRQAVQDISEGRVDTAIVGVSNLLLNANLN--SLF-----Q--GLNRL----------S----------- 179 (270)
Q Consensus 130 ~~~cas~~~al~~A~~~i~~G~~d~~lv~g~~~~~~~~~~--~~~-----~--~~~~l----------s----------- 179 (270)
+++|+||+.|+..|+++|++|++|++||+|+|.+.+.... ..+ . .++.. +
T Consensus 79 ~~~CaSG~~Ai~~a~~~I~sG~~d~~l~gG~E~ms~~p~~~~~~~~~~~~~~~~~~~~a~~~~~~ygitre~~d~~A~~s 158 (361)
T PRK06690 79 DRQCGAGLEAIRTACHFIQGGAGKCYIAGGVESTSTSPFQNRARFSPETIGDPDMGVAAEYVAERYNITREMQDEYACLS 158 (361)
T ss_pred hhhhhHHHHHHHHHHHHHHCCCCCEEEEeccccccCCCcccccccCcccccCccHHHHHHHHHHHhCCCHHHHHHHHHHH
Confidence 9999999999999999999999999999999987643210 000 0 00100 0
Q ss_pred ----------CC-------------CCCc-------------c-cCC-----CCCceeecCeeEEEEecChHHHHhhcCc
Q psy4744 180 ----------PD-------------GKTR-------------S-FDH-----LANGYARSEGIVVLLLQRSETALRSYGE 217 (270)
Q Consensus 180 ----------~~-------------~~~~-------------p-fd~-----~~~g~~~geGA~alvL~~~~~A~~~~g~ 217 (270)
+. ...| | |+. ..+...++|||+++||.+++.|++. +.
T Consensus 159 ~k~a~~a~~n~~~~~ei~~v~~~~d~~~r~~~~~e~ll~~l~p~~~~~g~lt~~~~~~~~DGAaAvvl~s~e~A~~l-g~ 237 (361)
T PRK06690 159 YKRTLQALEKGYIHEEILSFNGLLDESIKKEMNYERIIKRTKPAFLHNGTVTAGNSCGVNDGACAVLVMEEGQARKL-GY 237 (361)
T ss_pred HHHHHHHHHCCCCCCceecccCccccccCCCCCHHHHhhcCCCcccCCCceeccccCCCCCCeEEEEEecHHHHHHc-CC
Confidence 00 0011 1 211 0122246999999999999999876 65
Q ss_pred eEeEEEeccCCCCCCCcCCCHHHHHHHHHHHHHHcCCCCCCccEEEcccC
Q psy4744 218 VLHAESRFYGSLERPFVGFNQASLVEFFTNFYQKARVNPGQVDFLEADGS 267 (270)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~agi~~~did~v~~hgt 267 (270)
.+.+++.+.+..... ......+...+++++|+++|++++|||++|+|-.
T Consensus 238 ~p~~~i~~~~~~~~~-~~~~~~~~~~a~~~al~~Agl~~~Did~~ei~ea 286 (361)
T PRK06690 238 KPVLRFVRSAVVGVD-PNLPGTGPIFAVNKLLNEMNMKVEDIDYFEINEA 286 (361)
T ss_pred CceEEEEEEEEeccC-cccchhHHHHHHHHHHHHcCCCHHHcCEeeecch
Confidence 555555555532211 1112456788999999999999999999999853
No 89
>PRK07855 lipid-transfer protein; Provisional
Probab=99.68 E-value=9.3e-16 Score=135.74 Aligned_cols=188 Identities=13% Similarity=0.056 Sum_probs=123.1
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCeEEEEccCCCCccccccCccccchhhHhhhhhhhHHHHHHHHcCCCC--CCcc
Q psy4744 51 LVRCFIEPCFEAILDAGINPKSLAGSNSSVYTNSCISDDESLGCDERLTTNFWLLAHVRCLLANRIAYLFDLKG--PSFT 128 (270)
Q Consensus 51 ~~~l~l~a~~~Al~dAg~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl~G--p~~~ 128 (270)
...|+.+|+++||+|||+++++|| +++++.. ... ....++..+|+++ |...
T Consensus 24 ~~~L~~eA~~~Al~DAgl~~~dID----~~~~~~~-~~~----------------------~~~~l~~~lGl~~~~~~~~ 76 (386)
T PRK07855 24 ELRLACEAVLAALDDAGLAPSDVD----GLVTFTM-DTN----------------------PEIAVARALGIGELKFFSR 76 (386)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC----EEEEecC-ccc----------------------cHHHHHHHCCCCCCcceee
Confidence 467999999999999999999988 4554321 000 0124788999976 3357
Q ss_pred ccccchhHHHHHHHHHHHHhcCCCCEEEEeeec--cccCch------------h----HHhhhcCcccC-----------
Q psy4744 129 IDNSWTGGIEVLRQAVQDISEGRVDTAIVGVSN--LLLNAN------------L----NSLFQGLNRLS----------- 179 (270)
Q Consensus 129 v~~~cas~~~al~~A~~~i~~G~~d~~lv~g~~--~~~~~~------------~----~~~~~~~~~ls----------- 179 (270)
|+++|+|+..+|..|++.|++|++|+|||+|.. ...... . .......+...
T Consensus 77 v~~gg~sg~~~~~~A~~~I~sG~~d~vLv~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~al~a~~ 156 (386)
T PRK07855 77 IHYGGGAACATVQQAAMAVATGVADVVVCYRAFNERSGMRFGQGQTGLAENPTSTGVDYGWSYPHGLLTPAAWVAMLARR 156 (386)
T ss_pred ecCCcHHHHHHHHHHHHHHHCCCCCEEEEEeecccccccccccccccccccccccccchhhhhhcCCCChHHHHHHHHHH
Confidence 899999999999999999999999999999882 210000 0 00001112111
Q ss_pred --------------------CCCCCcccCCCC----------------------CceeecCeeEEEEecChHHHHhhcCc
Q psy4744 180 --------------------PDGKTRSFDHLA----------------------NGYARSEGIVVLLLQRSETALRSYGE 217 (270)
Q Consensus 180 --------------------~~~~~~pfd~~~----------------------~g~~~geGA~alvL~~~~~A~~~~g~ 217 (270)
.+...+|+...+ +...++|||+++||.+++.|++. +.
T Consensus 157 ym~~~G~t~e~lA~vavk~~~~A~~NP~A~~~~~~~t~e~vl~s~~Ia~Pl~~~d~~~~sDGAaAvvl~see~A~~l-~~ 235 (386)
T PRK07855 157 YMHEYGATSEDFGRVAVADRKHAATNPKAWFYGRPITLEDHQNSRWIAEPLRLLDCCQESDGAVALVVTSAERARDL-KQ 235 (386)
T ss_pred HHHHHCCCHHHHHHHHHHHHHHHhcChHhhhcCCCCCHHHHhcCCcccCCchhhhcCCcCCceEEEEEecHHHHhhC-CC
Confidence 112234443321 23356999999999999999864 32
Q ss_pred eEeEEEeccCCCCCCC--c--------CCCHHHHHHHHHHHHHHcCCCCCCccEEEcccC
Q psy4744 218 VLHAESRFYGSLERPF--V--------GFNQASLVEFFTNFYQKARVNPGQVDFLEADGS 267 (270)
Q Consensus 218 ~~~~~~~~~~~~~~~~--~--------~~~~~~~~~a~~~al~~agi~~~did~v~~hgt 267 (270)
....+.+.+...... . .........+++++|++|||+++|||++|+|-+
T Consensus 236 -~pv~I~g~~~~~~~~~~~~~~~~~~d~~~~~~~~~aa~~a~~~AGi~~~DiDv~El~D~ 294 (386)
T PRK07855 236 -RPAVIKAAAQGSGADQYMMTSYYRDDITGLPEMGLVARQLWAQSGLGPADIDTAILYDH 294 (386)
T ss_pred -CCEEEEEEEEecCCccccccccccccccccchHHHHHHHHHHHcCCCHHHCcEEEeccC
Confidence 223555544321111 0 011244568999999999999999999999964
No 90
>TIGR02845 spore_V_AD stage V sporulation protein AD. Bacillus and Clostridium species contain about 10 % dipicolinic acid (pyridine-2,6-dicarboxylic acid) by weight. This protein family, SpoVAD, belongs to the spoVA operon that is suggested to act in the transport of dipicolinic acid (DPA) from the mother cell, where DPA is synthesized, to the forespore, a process essential to sporulation. Members of this protein family are found, so far, in exactly those species believed capable of endospore formation.
Probab=99.67 E-value=1.4e-15 Score=128.04 Aligned_cols=175 Identities=11% Similarity=0.126 Sum_probs=127.0
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCeEEEEccCCCCccccccCccccchhhHhhhhhhhHHHHHHHHcCCCCCCcccc
Q psy4744 51 LVRCFIEPCFEAILDAGINPKSLAGSNSSVYTNSCISDDESLGCDERLTTNFWLLAHVRCLLANRIAYLFDLKGPSFTID 130 (270)
Q Consensus 51 ~~~l~l~a~~~Al~dAg~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl~Gp~~~v~ 130 (270)
...|+.+|+++||++||+++++++ .+++|+.. + ....+..++..||+ |.+.|+
T Consensus 50 e~eLa~eAa~~ALekAGL~~~DID----~IIvGdl~-~--------------------Q~~~As~vA~~LGI--P~fdV~ 102 (327)
T TIGR02845 50 ERKLMEDAVNLALKKANLKKDDVD----FFLAGDLL-N--------------------QIITANFVARDLGI--PFLGLY 102 (327)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC----EEEEeCCC-C--------------------cccHHHHHHHHhCC--CEEEEe
Confidence 467999999999999999999888 56666321 0 01246678888987 889999
Q ss_pred ccchhHHHHHHHHHHHHhcCCCCEEEEeeeccccCchhHHhhh-cCcccCCCCCCcccCCCCCceeecCeeEEEEecChH
Q psy4744 131 NSWTGGIEVLRQAVQDISEGRVDTAIVGVSNLLLNANLNSLFQ-GLNRLSPDGKTRSFDHLANGYARSEGIVVLLLQRSE 209 (270)
Q Consensus 131 ~~cas~~~al~~A~~~i~~G~~d~~lv~g~~~~~~~~~~~~~~-~~~~ls~~~~~~pfd~~~~g~~~geGA~alvL~~~~ 209 (270)
++|+|++.||..|..+|++|.+|.|||++++.+.+......+- .+|. .+ ......+++||||+||++.+
T Consensus 103 ~ACSTf~~AL~lAa~lI~SG~ad~VLVV~Ssh~S~AErqfr~p~eyg~------q~----~~ta~~tgdGAGA~vl~~~~ 172 (327)
T TIGR02845 103 GACSTSMETLALGAMLVDGGFADRVLAATSSHYATAERQFRYPTEYGV------QK----PPTAQWTVTGAGAVLLASTG 172 (327)
T ss_pred ccCHHHHHHHHHHHHHHhCCCCCEEEEEEecccchhhhhccccccccc------CC----CCeeeEEEcccEEEEEeecC
Confidence 9999999999999999999999999999999855444332221 1111 11 23456799999999998765
Q ss_pred HHHhhcCceEeEEEeccCCCCCCC--cCCCHHHHHHHHHHHHHHcCCCCCCccEEEc
Q psy4744 210 TALRSYGEVLHAESRFYGSLERPF--VGFNQASLVEFFTNFYQKARVNPGQVDFLEA 264 (270)
Q Consensus 210 ~A~~~~g~~~~~~~~~~~~~~~~~--~~~~~~~~~~a~~~al~~agi~~~did~v~~ 264 (270)
.-.++.++. -+++..+|.. +++ -.-..++..+.|.+-+++.|.+|+|.|.|.+
T Consensus 173 ~~~~i~~~t-~gkv~d~g~~-d~~nmgaamapaa~dti~~h~~d~~~~~~~yd~i~t 227 (327)
T TIGR02845 173 GGPRITSAT-IGKVVDYGIT-DPLDMGAAMAPAAADTIEAHFKDTGRSVDDYDLIVT 227 (327)
T ss_pred CCCceEEEE-EEEEEecCCC-CcccchhhhhHHHHHHHHHHHHHcCCChhhccEEEe
Confidence 333332222 2466666654 232 2223466789999999999999999999875
No 91
>PRK06066 acetyl-CoA acetyltransferase; Provisional
Probab=99.66 E-value=2e-15 Score=133.03 Aligned_cols=190 Identities=18% Similarity=0.150 Sum_probs=120.0
Q ss_pred HHHHHHHHHHHHHHHCC-CCC-CCCCCCCeEEEEccCCCCccccccCccccchhhHhhhhhhhHHHHHHHHcCCC-CCCc
Q psy4744 51 LVRCFIEPCFEAILDAG-INP-KSLAGSNSSVYTNSCISDDESLGCDERLTTNFWLLAHVRCLLANRIAYLFDLK-GPSF 127 (270)
Q Consensus 51 ~~~l~l~a~~~Al~dAg-~~~-~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl~-Gp~~ 127 (270)
...|+.+|+++||+||| +++ ++|+ ++++++. ..+... ......+...+|+. .|.+
T Consensus 25 ~~eL~~eA~~~Al~DAG~l~~~~dId----~~~~~~~-~~~~~~-----------------~~~~~~~~~~lg~~~~~~~ 82 (385)
T PRK06066 25 FREMMFEAASRAYKDAGNINPRRDVD----SFISCQE-DFWEGI-----------------AIADEFAPDQIGGAMRPTM 82 (385)
T ss_pred HHHHHHHHHHHHHHhcCCCCChhcCC----EEEEecC-cccCcc-----------------cccchhHHHHcccCCCCeE
Confidence 46899999999999999 986 6888 5666431 111000 00112255678874 4777
Q ss_pred cccccchhHHHHHHHHHHHHhcCCCCEEEEeeeccccCchhHH---------hh-hcCcccC------------------
Q psy4744 128 TIDNSWTGGIEVLRQAVQDISEGRVDTAIVGVSNLLLNANLNS---------LF-QGLNRLS------------------ 179 (270)
Q Consensus 128 ~v~~~cas~~~al~~A~~~i~~G~~d~~lv~g~~~~~~~~~~~---------~~-~~~~~ls------------------ 179 (270)
.| |+|+..++..|++.|++|.+|+|||+|.+.+....... .+ ...+...
T Consensus 83 ~v---~~sg~~a~~~A~~aV~sG~~d~vLv~g~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~p~~~~al~a~rym~~yG~ 159 (385)
T PRK06066 83 TV---AGDGLQGLAHAVMHINSGLANVVVVEAHSKPSDILTFSDVVKFAMDPIYVRPIGPPNPHFIAGLDAVKFMSRKGI 159 (385)
T ss_pred EE---eCcHHHHHHHHHHHHHcCCCCEEEEEEEeeccCccchhhhhhcccCcceecccCCCcHHHHHHHHHHHHHHHHCc
Confidence 76 89999999999999999999999999988643210000 00 0111100
Q ss_pred -------------CCCCCcccCCCC---------------------CceeecCeeEEEEecChHHHHhhcCceEeEEEec
Q psy4744 180 -------------PDGKTRSFDHLA---------------------NGYARSEGIVVLLLQRSETALRSYGEVLHAESRF 225 (270)
Q Consensus 180 -------------~~~~~~pfd~~~---------------------~g~~~geGA~alvL~~~~~A~~~~g~~~~~~~~~ 225 (270)
.+...+|....+ +...++|||+++||.+++.|++. +..+ .++.+
T Consensus 160 t~E~lA~Vavk~r~nA~~NP~A~~r~~~t~edvl~S~~ia~Pl~~~d~~~~~DGAaAvvl~s~~~a~~l-~~~p-v~I~g 237 (385)
T PRK06066 160 TREDLALVVEKNKKAGLSNPRASYASNISLEDVLSSEYVVYPLTELDIAPFVDGAIVVVLASEEVAKKL-TDDP-VWIKG 237 (385)
T ss_pred CHHHHHHHHHHHHHHHhcCChhhcCCCCCHHHHhcCCcccCCchhhccCCCCCceEEEEEeCHHHHHhc-CCCC-EEEEE
Confidence 111223332222 33357999999999999999864 3222 25554
Q ss_pred cCCCCC--CC---cCCCHHHHHHHHHHHHHHcCCC--CCCccEEEcccC
Q psy4744 226 YGSLER--PF---VGFNQASLVEFFTNFYQKARVN--PGQVDFLEADGS 267 (270)
Q Consensus 226 ~~~~~~--~~---~~~~~~~~~~a~~~al~~agi~--~~did~v~~hgt 267 (270)
++...+ .. ..........+.+++|++|||+ ++|||++|+|-.
T Consensus 238 ~g~~~~~~~~~~~~~~~~~~~~~Aa~~a~~~AGi~~p~~DiD~~ei~D~ 286 (385)
T PRK06066 238 IGWSTESSNLETAELGKANYMRIAADMAYKMAGIESPRKEVDAAEVDDR 286 (385)
T ss_pred EEEecCCcccccccccccHHHHHHHHHHHHHcCCCCCHHHCcEEEEecC
Confidence 443221 11 1112334457999999999998 699999999964
No 92
>KOG1406|consensus
Probab=99.66 E-value=5.9e-17 Score=130.60 Aligned_cols=189 Identities=16% Similarity=0.204 Sum_probs=133.4
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCCCeEEEEccCCCCccccccCccccchhhHhhhhhhhHHHHHHHHcCCCC-CCccccc
Q psy4744 53 RCFIEPCFEAILDAGINPKSLAGSNSSVYTNSCISDDESLGCDERLTTNFWLLAHVRCLLANRIAYLFDLKG-PSFTIDN 131 (270)
Q Consensus 53 ~l~l~a~~~Al~dAg~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl~G-p~~~v~~ 131 (270)
.++-+|...||+|+++...+++...+|.++|.+..+. |.-+.+|++| |.+.|++
T Consensus 31 d~a~ea~tkal~da~ikys~vqqa~vgyvfgdstcgq-------------------------raiyevgmtgipi~nvnn 85 (408)
T KOG1406|consen 31 DFAKEAITKALQDAGIKYSEVQQAVVGYVFGDSTCGQ-------------------------RAIYEVGMTGIPIYNVNN 85 (408)
T ss_pred hHHHHHHHHHHHhcCCCHHHHHhhhheeeecCCccch-------------------------HHHHhccccCcceeeccC
Confidence 5778899999999999988998888899998665443 3445788888 9999999
Q ss_pred cchhHHHHHHHHHHHHhcCCCCEEEEeeeccccCch------------------------------hHHhhh--------
Q psy4744 132 SWTGGIEVLRQAVQDISEGRVDTAIVGVSNLLLNAN------------------------------LNSLFQ-------- 173 (270)
Q Consensus 132 ~cas~~~al~~A~~~i~~G~~d~~lv~g~~~~~~~~------------------------------~~~~~~-------- 173 (270)
.|++|..+|.+|.+.|++|.+|+||+.|.|.+..-. ....|.
T Consensus 86 ncatgssalflakqiiesgn~dcvlalgfekm~~gsl~~k~~dra~p~dkhi~~m~e~ygl~a~pmaaqmfgnagkehme 165 (408)
T KOG1406|consen 86 NCATGSSALFLAKQIIESGNSDCVLALGFEKMERGSLSNKAADRALPVDKHISVMSETYGLEAAPMAAQMFGNAGKEHME 165 (408)
T ss_pred ccccCchHHHHHHHHHhcCCcceEEeechhhhCCcccchhhhhccCcchhhHHHHHhhccCCCCcchHHHhhhhHHHHHH
Confidence 999999999999999999999999999998633210 000000
Q ss_pred cCccc-----------CCCCCCcccCCCCCce---------------------eecCeeEEEEecChHHHHhhcCceEe-
Q psy4744 174 GLNRL-----------SPDGKTRSFDHLANGY---------------------ARSEGIVVLLLQRSETALRSYGEVLH- 220 (270)
Q Consensus 174 ~~~~l-----------s~~~~~~pfd~~~~g~---------------------~~geGA~alvL~~~~~A~~~~g~~~~- 220 (270)
+.|-- ..+...+||++-++-+ ..+||+++.||.++...++. +....
T Consensus 166 kygtk~ehfakiawknhkhsvnnpysqf~deysldqvm~s~~v~dflt~lqccptsdgaaaailaseafv~k~-gl~~qa 244 (408)
T KOG1406|consen 166 KYGTKPEHFAKIAWKNHKHSVNNPYSQFRDEYSLDQVMKSPQVVDFLTKLQCCPTSDGAAAAILASEAFVRKH-GLEKQA 244 (408)
T ss_pred HhCCCHHHHhHhhhhccccccCChhHhhhhhccHHHHhcchHHHHHHHHhhcCCCCCchHHHHHhHHHHHHhc-ccHHHH
Confidence 00000 0223567777766555 35999999999998776654 43222
Q ss_pred EEEeccCCCCCCCcCC---------CHHHHHHHHHHHHHHcCCCCCCccEEEcccC
Q psy4744 221 AESRFYGSLERPFVGF---------NQASLVEFFTNFYQKARVNPGQVDFLEADGS 267 (270)
Q Consensus 221 ~~~~~~~~~~~~~~~~---------~~~~~~~a~~~al~~agi~~~did~v~~hgt 267 (270)
.++.+.-..++.-+.. ..+..+.+.++++++.|++|.||++||+|-+
T Consensus 245 veivg~em~td~ps~faeks~ikm~gfdm~~~aa~~l~aksgltpndvqvielhdc 300 (408)
T KOG1406|consen 245 VEIVGMEMATDPPSTFAEKSLIKMAGFDMTRLAAKRLFAKSGLTPNDVQVIELHDC 300 (408)
T ss_pred HHHHHHHhccCCchhhhhhhhhhhhcchHHHHHHHHHHHHcCCCcccceEEEeecc
Confidence 2333332222221111 1234578889999999999999999999964
No 93
>PLN02326 3-oxoacyl-[acyl-carrier-protein] synthase III
Probab=99.65 E-value=1.8e-15 Score=134.04 Aligned_cols=175 Identities=17% Similarity=0.193 Sum_probs=119.4
Q ss_pred hHHHHHHHHHHHHHHHCCCCCCCCCCCCeEEEEccCCCCccccccCccccchhhHhhhhhhhHHHHHHHHcCCCC-CCcc
Q psy4744 50 PLVRCFIEPCFEAILDAGINPKSLAGSNSSVYTNSCISDDESLGCDERLTTNFWLLAHVRCLLANRIAYLFDLKG-PSFT 128 (270)
Q Consensus 50 ~~~~l~l~a~~~Al~dAg~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl~G-p~~~ 128 (270)
+...|+.+|+++||+++|+++++|+ .+++++..+++. . ..+..+...||+++ |++.
T Consensus 95 ~~~~La~~Aa~~aL~~agi~~~dId----~li~~s~~~~~~------------------~-~~a~~v~~~LG~~~~~~~d 151 (379)
T PLN02326 95 TLTSLAVEAAKKALEMAGVDPEDVD----LVLLCTSSPDDL------------------F-GSAPQVQAALGCTNALAFD 151 (379)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCC----EEEEEeCCCCcc------------------C-cHHHHHHHHhCCCCCceee
Confidence 4679999999999999999988876 566665443321 0 13456888999865 6788
Q ss_pred ccccchhHHHHHHHHHHHHhcCCCCEEEEeeeccccCchhHHhhhcCcccCCCCCCcccCCCCCceeecCeeEEEEecCh
Q psy4744 129 IDNSWTGGIEVLRQAVQDISEGRVDTAIVGVSNLLLNANLNSLFQGLNRLSPDGKTRSFDHLANGYARSEGIVVLLLQRS 208 (270)
Q Consensus 129 v~~~cas~~~al~~A~~~i~~G~~d~~lv~g~~~~~~~~~~~~~~~~~~ls~~~~~~pfd~~~~g~~~geGA~alvL~~~ 208 (270)
|+.+|++++.||..|.++|++|.++.+||+++|.+.... + |+......++||||+|+||++.
T Consensus 152 v~~~Ca~~~~aL~~A~~~l~~g~~~~vLVv~~e~~s~~~-----------------~-~~d~~~~~lfGDGAaAvlL~~~ 213 (379)
T PLN02326 152 LTAACSGFVLGLVTAARFIRGGGYKNVLVIGADALSRYV-----------------D-WTDRGTCILFGDGAGAVVLQAC 213 (379)
T ss_pred ccccchHHHHHHHHHHHHHHcCCCCEEEEEEechhcCCC-----------------C-ccccCceEEEcceeEEEEEEEc
Confidence 999999999999999999999999999999999832111 1 1123455689999999999975
Q ss_pred HHHHhhcCceEeEEEecc------------CCC-----------------CCCC--cCCC-H-------HHHHHHHHHHH
Q psy4744 209 ETALRSYGEVLHAESRFY------------GSL-----------------ERPF--VGFN-Q-------ASLVEFFTNFY 249 (270)
Q Consensus 209 ~~A~~~~g~~~~~~~~~~------------~~~-----------------~~~~--~~~~-~-------~~~~~a~~~al 249 (270)
+.... + .....+..+ +.. .... ...+ . ....++++++|
T Consensus 214 ~~~~~--~-i~~~~~~t~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~L 290 (379)
T PLN02326 214 DDDED--G-LLGFDMHSDGNGHKHLHATFKGEDDDSSGGNTNGVGDFPPKKASYSCIQMNGKEVFKFAVRCVPQVIESAL 290 (379)
T ss_pred CCCCC--c-eEEEEEEEcCCCCCeEEecCCCCcccccccccccccccccccccccceEecCHHHHHHHHHHHHHHHHHHH
Confidence 43211 1 111111111 100 0000 0001 0 11346788999
Q ss_pred HHcCCCCCCccEEEcccCC
Q psy4744 250 QKARVNPGQVDFLEADGSA 268 (270)
Q Consensus 250 ~~agi~~~did~v~~hgtg 268 (270)
+++|++++|||++-+|-.+
T Consensus 291 ~~~gl~~~dId~~v~Hq~n 309 (379)
T PLN02326 291 QKAGLTAESIDWLLLHQAN 309 (379)
T ss_pred HHcCCCHHHCCEEEECCCC
Confidence 9999999999999999654
No 94
>KOG1390|consensus
Probab=99.65 E-value=2.7e-16 Score=129.74 Aligned_cols=189 Identities=17% Similarity=0.136 Sum_probs=138.0
Q ss_pred hHHHHHHHHHHHHHHHCCCCCCCCCCCCeEEEEccCCCCccccccCccccchhhHhhhhhhhHHHHHHHHcCC--CCCCc
Q psy4744 50 PLVRCFIEPCFEAILDAGINPKSLAGSNSSVYTNSCISDDESLGCDERLTTNFWLLAHVRCLLANRIAYLFDL--KGPSF 127 (270)
Q Consensus 50 ~~~~l~l~a~~~Al~dAg~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl--~Gp~~ 127 (270)
+..+|+..|.+.||+++.+++.+++....|.++....+.. ++.+.+.--|| .-|++
T Consensus 29 ~A~~Lgsvaikaalera~v~~~~v~eVi~GnVl~AnlGQa----------------------paRQaalgAGlp~sv~~t 86 (396)
T KOG1390|consen 29 TATELGSVAIKAALERAVVPPSDVAEVIFGNVLSANLGQA----------------------PARQAALGAGLPYSVPAT 86 (396)
T ss_pred chhhHHHHHHHHHHHhcCCCHHHhhhhhhccccccccCcc----------------------hHHHHHhhcCCCcceeeE
Confidence 3567888899999999999988888777777776655543 34455555555 34889
Q ss_pred cccccchhHHHHHHHHHHHHhcCCCCEEEEeeeccccCchhHHhhhcC----cccC------------------------
Q psy4744 128 TIDNSWTGGIEVLRQAVQDISEGRVDTAIVGVSNLLLNANLNSLFQGL----NRLS------------------------ 179 (270)
Q Consensus 128 ~v~~~cas~~~al~~A~~~i~~G~~d~~lv~g~~~~~~~~~~~~~~~~----~~ls------------------------ 179 (270)
+|+--|+||+.|+.+|++.|+.|..|.+++||.|.|.+.+.+. ..+. |...
T Consensus 87 TvNkvCaSgmKAv~laaQsI~~G~~divVaGGmEsMS~vP~~~-~~R~g~~~G~~~l~Dgi~~DGL~D~y~~~~MG~~aE 165 (396)
T KOG1390|consen 87 TVNKVCASGMKAVILAAQSIQTGHADIVVAGGMESMSNVPYLY-VARGGVKYGGVQLVDGIVKDGLTDAYDKCHMGICAE 165 (396)
T ss_pred eehhhhhhhHHHHHHHHHHHhcCCccEEEecccchhccCcchh-hhccCcCcCCeeeeechhhcchHHHhccCCcchhHh
Confidence 9999999999999999999999999999999999988766222 1111 1000
Q ss_pred ----------------------------------------------------CCC------------CCcccCCCCCce-
Q psy4744 180 ----------------------------------------------------PDG------------KTRSFDHLANGY- 194 (270)
Q Consensus 180 ----------------------------------------------------~~~------------~~~pfd~~~~g~- 194 (270)
.++ ..||.=....|+
T Consensus 166 ~~a~~~~ItRe~QD~yAI~Sy~r~~~Aq~~g~f~~EIVPV~V~~~rg~~~v~~DEe~~k~~~~~~~~~l~~vF~~~ggTV 245 (396)
T KOG1390|consen 166 NTAKKYQITREEQDAYAIESYKRSENAQKAGKFDKEIVPVEVKTKRGETVVKKDEEPKKGSNIEKLSKLRPVFKEDGGTV 245 (396)
T ss_pred hhHHHhCCcHhhhhhHHHHhHHHHHHHHhcCCCCCceeeEEEecCCCcEEeccchhhhcccchhhhccccceeecCCCee
Confidence 000 011111111222
Q ss_pred ------eecCeeEEEEecChHHHHhhcCceEeEEEeccCCCCCCCcCC--CHHHHHHHHHHHHHHcCCCCCCccEEEcc
Q psy4744 195 ------ARSEGIVVLLLQRSETALRSYGEVLHAESRFYGSLERPFVGF--NQASLVEFFTNFYQKARVNPGQVDFLEAD 265 (270)
Q Consensus 195 ------~~geGA~alvL~~~~~A~~~~g~~~~~~~~~~~~~~~~~~~~--~~~~~~~a~~~al~~agi~~~did~v~~h 265 (270)
.+.|||+|+||.+.+.+.+. |..+.+++.+|+... ..| ..-+...++.++|+++|+..+||||+|.+
T Consensus 246 TaaNAS~lnDGAAAvvL~s~e~~~~~-glkPLArIv~~~dAa---~~P~df~iaP~laipk~lk~aG~~~sdVd~~EiN 320 (396)
T KOG1390|consen 246 TAANASTLNDGAAAVVLMSGEAAKEL-GLKPLARIVAWGDAA---TEPIDFTIAPALAIPKALKKAGLEQSDVDYWEIN 320 (396)
T ss_pred ccccccccCccceeeEEechhhHhHc-CCchHHHHhhhhhhc---cChhhcccchHHHHHHHHHHcCcchhhhhHHhhh
Confidence 36899999999999999887 999999999999532 222 12345788999999999999999999864
No 95
>CHL00203 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Provisional
Probab=99.65 E-value=3.3e-15 Score=129.93 Aligned_cols=173 Identities=15% Similarity=0.099 Sum_probs=118.6
Q ss_pred hHHHHHHHHHHHHHHHCCCCCCCCCCCCeEEEEccCCCCccccccCccccchhhHhhhhhhhHHHHHHHHcCCCC-CCcc
Q psy4744 50 PLVRCFIEPCFEAILDAGINPKSLAGSNSSVYTNSCISDDESLGCDERLTTNFWLLAHVRCLLANRIAYLFDLKG-PSFT 128 (270)
Q Consensus 50 ~~~~l~l~a~~~Al~dAg~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl~G-p~~~ 128 (270)
....|+.+|+++||+++|+++++++ .+++++...+... ..+..+...+|+++ |++.
T Consensus 50 ~~~~la~~A~~~aL~~ag~~~~dId----~vi~~s~~~~~~~-------------------~~~~~v~~~Lg~~~~~~~~ 106 (326)
T CHL00203 50 SLTKLAAEAANKALDKAHMDPLEID----LIILATSTPDDLF-------------------GSASQLQAEIGATRAVAFD 106 (326)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCC----EEEEEeCCCCCCC-------------------chHHHHHHHhCCCCCceee
Confidence 3578999999999999999988887 5777654433210 12345788889865 6788
Q ss_pred ccccchhHHHHHHHHHHHHhcCCCCEEEEeeeccccCchhHHhhhcCcccCCCCCCcccCCCCCceeecCeeEEEEecCh
Q psy4744 129 IDNSWTGGIEVLRQAVQDISEGRVDTAIVGVSNLLLNANLNSLFQGLNRLSPDGKTRSFDHLANGYARSEGIVVLLLQRS 208 (270)
Q Consensus 129 v~~~cas~~~al~~A~~~i~~G~~d~~lv~g~~~~~~~~~~~~~~~~~~ls~~~~~~pfd~~~~g~~~geGA~alvL~~~ 208 (270)
|+.+|+|++.+|..|.++|++|+++.+||+++|.+.... +++......++||||+|+||++.
T Consensus 107 v~~~Casg~~al~~A~~~i~sg~~~~~Lvv~~e~~s~~~------------------~~~~~~~~~~fgDga~A~ll~~~ 168 (326)
T CHL00203 107 ITAACSGFILALVTATQFIQNGSYKNILVVGADTLSKWI------------------DWSDRKTCILFGDGAGAAIIGAS 168 (326)
T ss_pred ecccchhHHHHHHHHHHHHHcCCCCEEEEEEehhhhCcC------------------CcccCCceEEEcceeeEEEEEEc
Confidence 999999999999999999999999999999999832111 11112346789999999999874
Q ss_pred HHHHhhcCceEeEEEeccCCC------------C---CCCcCCC--------------H---HHHHHHHHHHHHHcCCCC
Q psy4744 209 ETALRSYGEVLHAESRFYGSL------------E---RPFVGFN--------------Q---ASLVEFFTNFYQKARVNP 256 (270)
Q Consensus 209 ~~A~~~~g~~~~~~~~~~~~~------------~---~~~~~~~--------------~---~~~~~a~~~al~~agi~~ 256 (270)
+.. .. .......++.. . .....|. . ....++++++|+++|+++
T Consensus 169 ~~~-~~----~~~~~~t~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~L~~~g~~~ 243 (326)
T CHL00203 169 YEN-SI----LGFKLCTDGKLNSHLQLMNKPVNNQSFGTTKLPQGQYQSISMNGKEVYKFAVFQVPAVIIKCLNALNISI 243 (326)
T ss_pred CCC-Ce----EEEEEEEcCCCcceEEecCCCCCcccccccccccCCcceEEECCHHHHHHHHHHHHHHHHHHHHHcCCCH
Confidence 421 11 11111111100 0 0000110 0 123457899999999999
Q ss_pred CCccEEEcccCC
Q psy4744 257 GQVDFLEADGSA 268 (270)
Q Consensus 257 ~did~v~~hgtg 268 (270)
+|||++-+|-.+
T Consensus 244 ~did~~~~hq~~ 255 (326)
T CHL00203 244 DEVDWFILHQAN 255 (326)
T ss_pred HHCCEEEECCCC
Confidence 999999999654
No 96
>cd00827 init_cond_enzymes "initiating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type III and polyketide synthases, type III, which include chalcone synthase and related enzymes. They are characterized by the utlization of CoA substrate primers, as well as the nature of their active site residues.
Probab=99.62 E-value=9.2e-15 Score=127.00 Aligned_cols=175 Identities=17% Similarity=0.205 Sum_probs=124.7
Q ss_pred hHHHHHHHHHHHHHHHCCCCCCCCCCCCeEEEEccCCCCccccccCccccchhhHhhhhhhhHHHHHHHHcCC-CCCCcc
Q psy4744 50 PLVRCFIEPCFEAILDAGINPKSLAGSNSSVYTNSCISDDESLGCDERLTTNFWLLAHVRCLLANRIAYLFDL-KGPSFT 128 (270)
Q Consensus 50 ~~~~l~l~a~~~Al~dAg~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl-~Gp~~~ 128 (270)
....|+.+|+++||+++|+++++++ .+++++...... ....+.+++..+|+ ..|+++
T Consensus 47 ~~~~l~~~a~~~aL~~ag~~~~~Id----~li~~~~~~~~~------------------~~~~~~~i~~~lg~~~~~~~~ 104 (324)
T cd00827 47 DVPTMAVEAARRALERAGIDPDDIG----LLIVATESPIDK------------------GKSAATYLAELLGLTNAEAFD 104 (324)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCC----EEEEEcCCCCCC------------------CccHHHHHHHHcCCCCCceee
Confidence 4578999999999999999988887 677776543321 12356778999999 468899
Q ss_pred ccccchhHHHHHHHHHHHHhcCCCCEEEEeeeccccCchhHHhhhcCcccCCCCCCcccCCCCCceeecCeeEEEEecCh
Q psy4744 129 IDNSWTGGIEVLRQAVQDISEGRVDTAIVGVSNLLLNANLNSLFQGLNRLSPDGKTRSFDHLANGYARSEGIVVLLLQRS 208 (270)
Q Consensus 129 v~~~cas~~~al~~A~~~i~~G~~d~~lv~g~~~~~~~~~~~~~~~~~~ls~~~~~~pfd~~~~g~~~geGA~alvL~~~ 208 (270)
|+.+|+|++.||..|.++|++|.++.+||+++|.+..... +.+..++++||||+|+||++.
T Consensus 105 v~~~C~s~~~al~~A~~~i~~g~~~~vlvv~~e~~~~~~~-------------------~~~~~~~~~gdgaaA~ll~~~ 165 (324)
T cd00827 105 LKQACYGGTAALQLAANLVESGPWRYALVVASDIASYLLD-------------------EGSALEPTLGDGAAAMLVSRN 165 (324)
T ss_pred hhhhhHHHHHHHHHHHHHHHcCCCCEEEEEEEHHhhhccc-------------------CCCCccccccCceEEEEEecC
Confidence 9999999999999999999999999999999998433321 235678899999999999986
Q ss_pred HHHHhhcCceEeEEEeccCCC--------CC------------CCcCC---------CHHHHHHHHHHHHHHcCCCCCCc
Q psy4744 209 ETALRSYGEVLHAESRFYGSL--------ER------------PFVGF---------NQASLVEFFTNFYQKARVNPGQV 259 (270)
Q Consensus 209 ~~A~~~~g~~~~~~~~~~~~~--------~~------------~~~~~---------~~~~~~~a~~~al~~agi~~~di 259 (270)
+..... +. .......++.. .. .+... ......++++++|++++++ +||
T Consensus 166 ~~~~~~-~i-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~i 242 (324)
T cd00827 166 PGILAA-GI-VSTHSTSDPGYDFSPYPVMDGGYPKPCKLAYAIRLTAEPAGRAVFEAAHKLIAKVVRKALDRAGLS-EDI 242 (324)
T ss_pred cccccC-Cc-eeeeeecccccccCccceeccCCCcchhhhhhcceeecCCccchHHHHhHHHHHHHHHHHHHcccc-ccc
Confidence 642100 11 11111111100 00 01000 0233578889999999999 999
Q ss_pred cEEEcccCC
Q psy4744 260 DFLEADGSA 268 (270)
Q Consensus 260 d~v~~hgtg 268 (270)
+++.+|-.+
T Consensus 243 ~~~~~h~~~ 251 (324)
T cd00827 243 DYFVPHQPN 251 (324)
T ss_pred ceeeccCch
Confidence 999999654
No 97
>PRK08257 acetyl-CoA acetyltransferase; Validated
Probab=99.60 E-value=1.5e-14 Score=131.57 Aligned_cols=193 Identities=13% Similarity=0.014 Sum_probs=123.5
Q ss_pred HHHHHHHHHHHHHHHCCCC--CCCCCCCCeEEEEccCCCCccccccCccccchhhHhhhhhhhHHHHHHHHcCCCC-CCc
Q psy4744 51 LVRCFIEPCFEAILDAGIN--PKSLAGSNSSVYTNSCISDDESLGCDERLTTNFWLLAHVRCLLANRIAYLFDLKG-PSF 127 (270)
Q Consensus 51 ~~~l~l~a~~~Al~dAg~~--~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl~G-p~~ 127 (270)
...|+.+|+++||+|||++ +++|| +++++...... .+..+..++..+|+.. +..
T Consensus 27 ~~~L~~eA~~~Al~DAGl~~~~~dID----~v~v~~~~~~~-------------------~~~~~~~la~~lGl~p~~~~ 83 (498)
T PRK08257 27 PVDLMAAAARAAAADAGADAVLEAID----SVAVVNQLSWR-------------------YRDPPGLLAERLGADPARTV 83 (498)
T ss_pred HHHHHHHHHHHHHHhcCCCcCHHHCC----EEEEecccccc-------------------ccCHHHHHHHHcCCCCccee
Confidence 3679999999999999998 78888 56665432110 1123466888999953 333
Q ss_pred cccccchhHHHHHHHHHHHHhcCCCCEEEEeeeccccCchhHH-----------------------------hhhcCccc
Q psy4744 128 TIDNSWTGGIEVLRQAVQDISEGRVDTAIVGVSNLLLNANLNS-----------------------------LFQGLNRL 178 (270)
Q Consensus 128 ~v~~~cas~~~al~~A~~~i~~G~~d~~lv~g~~~~~~~~~~~-----------------------------~~~~~~~l 178 (270)
....+|+|+..+|..|++.|++|++|+|||+|+|.+.+..... .....+..
T Consensus 84 ~~~~GG~s~~~~v~~Aa~~IasG~advVLv~G~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~~ 163 (498)
T PRK08257 84 YSPVGGNSPQRLVNEAALRIAAGEADVALVAGAEAQSTATKLRKAGEKLDWTPQDEGPLADRGGDPRPMASPAELRHGLD 163 (498)
T ss_pred EecCCCHHHHHHHHHHHHHHHCCCCCEEEEeeeeeccccchhccccccccccccccccccccccccccccchhhhhcCCC
Confidence 4556788888999999999999999999999998743211000 00011111
Q ss_pred C-----------------------------------CCCCCcc--------------------------cCCCCCceeec
Q psy4744 179 S-----------------------------------PDGKTRS--------------------------FDHLANGYARS 197 (270)
Q Consensus 179 s-----------------------------------~~~~~~p--------------------------fd~~~~g~~~g 197 (270)
. .....+| |-.-.......
T Consensus 164 ~p~~~yal~a~ay~~~~G~t~e~~~a~~a~l~~~~~~~Aa~NP~A~~r~~~t~eevl~~~~~~rmIa~Pl~~ldca~~~~ 243 (498)
T PRK08257 164 RPVYVYPLFENALRAALGRSPEEHRAEMGELWAPFSAVAAKNPHAWIPRERSAEEIVTPTPDNRMIAWPYTKLMNANDMV 243 (498)
T ss_pred CcchHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHhhCHHHhhCCCCCHHHHhcccCCCCeeeCCccHhhcCCCCc
Confidence 0 0001122 11111111368
Q ss_pred CeeEEEEecChHHHHhhcCc--eEeEEEeccCCCCCCC---cCC---CHHHHHHHHHHHHHHcCCCCCCccEEEcccC
Q psy4744 198 EGIVVLLLQRSETALRSYGE--VLHAESRFYGSLERPF---VGF---NQASLVEFFTNFYQKARVNPGQVDFLEADGS 267 (270)
Q Consensus 198 eGA~alvL~~~~~A~~~~g~--~~~~~~~~~~~~~~~~---~~~---~~~~~~~a~~~al~~agi~~~did~v~~hgt 267 (270)
||++++||.+++.|++. +. .....+.+.+...+.. ..+ .......+.+++|++||++++|||++|+|-+
T Consensus 244 DGaaAvil~S~e~A~~l-~~~~~~~V~i~g~a~~~~~~~~~~r~~~~~~~~~~~aa~~a~~~AGi~~~Did~~elydc 320 (498)
T PRK08257 244 DQGAAVLLTSVAKARRL-GVPEDRWVYLHGGADAHDPYDILERPDLHRSPAIRAAGRRALALAGLGIDDIDAFDLYSC 320 (498)
T ss_pred ccceEEEEeeHHHHHhc-CCCCCceEEEEEEEEeeCccccccccccccChHHHHHHHHHHHHhCCCHHHCCEEEeccC
Confidence 99999999999999865 42 2234444444322221 111 2344567999999999999999999999864
No 98
>TIGR00748 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase, putative. Thus, although there is no experimental evidence supporting this name, the bioinformatics-based conclusion appears to be sound.
Probab=99.59 E-value=2.5e-14 Score=125.15 Aligned_cols=174 Identities=14% Similarity=0.085 Sum_probs=116.7
Q ss_pred hHHHHHHHHHHHHHHHCCCCCCCCCCCCeEEEEccCCCCccccccCccccchhhHhhhhhhhHHHHHHHHcCCC--CCCc
Q psy4744 50 PLVRCFIEPCFEAILDAGINPKSLAGSNSSVYTNSCISDDESLGCDERLTTNFWLLAHVRCLLANRIAYLFDLK--GPSF 127 (270)
Q Consensus 50 ~~~~l~l~a~~~Al~dAg~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl~--Gp~~ 127 (270)
....|+.+|+++||+++|+++++|+ .+++++..+++.. ...+..+...+|+. -+++
T Consensus 49 ~~~~la~~Aa~~aL~~agl~~~dID----~li~~s~~~~~~~------------------p~~a~~v~~~LGl~~~~~~~ 106 (345)
T TIGR00748 49 DTATIGVEAARNALKRAKIDPKDIG----AVYVGSESHPYAV------------------KPTATIVAEAIGATPDLTAA 106 (345)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCC----EEEEEecCCCccc------------------cchHHHHHHHcCCCCCceEE
Confidence 4579999999999999999998888 5677665443321 12355788899985 3788
Q ss_pred cccccchhHHHHHHHHHHHHhcCCCCEEEEeeeccccCchhHHhhhcCcccCCCCCCcccCCCCCceeecCeeEEEEecC
Q psy4744 128 TIDNSWTGGIEVLRQAVQDISEGRVDTAIVGVSNLLLNANLNSLFQGLNRLSPDGKTRSFDHLANGYARSEGIVVLLLQR 207 (270)
Q Consensus 128 ~v~~~cas~~~al~~A~~~i~~G~~d~~lv~g~~~~~~~~~~~~~~~~~~ls~~~~~~pfd~~~~g~~~geGA~alvL~~ 207 (270)
.|..+|+++..||..|..+|++|.++.+||++.|.+.. . |-+ ..-+.+||||+|+||++
T Consensus 107 dv~~aC~g~~~al~~A~~~i~sg~~~~vLVv~~d~~~~-------------~------~~~--~~~~~~GDGAaA~vl~~ 165 (345)
T TIGR00748 107 DLEFACKAGTAGIQACMGLVASGMIKYGLAIGADTAQG-------------A------PGD--ALEYTAGAGGAAYIIGE 165 (345)
T ss_pred EHHHhHHHHHHHHHHHHHHHHcCCCCEEEEEEEeeccc-------------C------CCc--cCcccCCCceEEEEEcc
Confidence 89999999999999999999999999999999998421 0 111 11245799999999986
Q ss_pred hHHHHhhcCceEeEEEeccC-----CCCCCC--c--CC---CHHHHHHHHHHHHHHcCCCCCCccEEEcccC
Q psy4744 208 SETALRSYGEVLHAESRFYG-----SLERPF--V--GF---NQASLVEFFTNFYQKARVNPGQVDFLEADGS 267 (270)
Q Consensus 208 ~~~A~~~~g~~~~~~~~~~~-----~~~~~~--~--~~---~~~~~~~a~~~al~~agi~~~did~v~~hgt 267 (270)
.+...+..+...+. ..... ...... . .. -.....++++++|+++|++++|||++-+|=.
T Consensus 166 ~~~~~~~~~~~~~~-~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~did~~i~Hq~ 236 (345)
T TIGR00748 166 KNTVAYFEGTYSYT-TDTPDFWRREGEPYPRHGGRFTGEPAYFHHVVTAAKGLMEKLGLTPEDFDYAVFHQP 236 (345)
T ss_pred CCcceEeeccccee-cccccccccCCCcCCCcCCeecChHHHHHHHHHHHHHHHHHcCCCHHHcCEEEeCCC
Confidence 43211110000000 00000 000000 0 00 0122347888999999999999999999943
No 99
>PRK08304 stage V sporulation protein AD; Validated
Probab=99.58 E-value=3.1e-14 Score=120.25 Aligned_cols=176 Identities=14% Similarity=0.145 Sum_probs=125.2
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCeEEEEccCCCCccccccCccccchhhHhhhhhhhHHHHHHHHcCCCCCCcccc
Q psy4744 51 LVRCFIEPCFEAILDAGINPKSLAGSNSSVYTNSCISDDESLGCDERLTTNFWLLAHVRCLLANRIAYLFDLKGPSFTID 130 (270)
Q Consensus 51 ~~~l~l~a~~~Al~dAg~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl~Gp~~~v~ 130 (270)
...|+.+|+++||++||+++++|+ .+++|... + ....+..++..+|+ |.+.|+
T Consensus 56 eseLa~eAa~~ALekAGI~~~DID----~lI~Gdll-~--------------------Q~~sAs~vA~~LGI--Pa~dV~ 108 (337)
T PRK08304 56 ERKMMEDAIQQALQKANLKKSDID----YLLAGDLL-N--------------------QIISANFAARELGI--PFLGLY 108 (337)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC----EEEEECCC-C--------------------CcchHHHHHHHhCC--cEEEEe
Confidence 568999999999999999999988 56666421 0 01245567788887 999999
Q ss_pred ccchhHHHHHHHHHHHHhcCCCCEEEEeeeccccCchhHHhhhcCcccCCCCCCcccCCCCCceeecCeeEEEEecChHH
Q psy4744 131 NSWTGGIEVLRQAVQDISEGRVDTAIVGVSNLLLNANLNSLFQGLNRLSPDGKTRSFDHLANGYARSEGIVVLLLQRSET 210 (270)
Q Consensus 131 ~~cas~~~al~~A~~~i~~G~~d~~lv~g~~~~~~~~~~~~~~~~~~ls~~~~~~pfd~~~~g~~~geGA~alvL~~~~~ 210 (270)
++|+|+..+|..|+.+|++|.+|.+||++++.+.+..-.+.|- ...+..||.. -...++||+|+||.+...
T Consensus 109 gACST~~~AL~lAa~lI~SG~ad~VLVV~Ssh~s~aerqfr~P-----~eyg~qrp~t----aqwtvtGAGA~i~~~~~~ 179 (337)
T PRK08304 109 GACSTMMESLALGSMLIDGGFADRVLAATSSHFATAERQFRFP-----TEYGGQRPPT----AQWTVTGAGAVLLSREGS 179 (337)
T ss_pred ccCHHHHHHHHHHHHHHhcCCCCEEEEEEcchhhhhhhhccCc-----hhccccCCCc----ceEEeeccEEEEEecCCC
Confidence 9999999999999999999999999999999855554332221 1122233322 224788999999987532
Q ss_pred HHhhcCceEeEEEeccCCCCCCC--cCCCHHHHHHHHHHHHHHcCCCCCCccEEEc
Q psy4744 211 ALRSYGEVLHAESRFYGSLERPF--VGFNQASLVEFFTNFYQKARVNPGQVDFLEA 264 (270)
Q Consensus 211 A~~~~g~~~~~~~~~~~~~~~~~--~~~~~~~~~~a~~~al~~agi~~~did~v~~ 264 (270)
-.++..+. -+++..+|.. ++. -.-..++..+.|.+-|++.|.+|+|.|.|.+
T Consensus 180 ~~~i~~~t-~Gkv~D~g~~-d~~nmgaaMapAa~dti~~h~~d~~~~~~~yDli~t 233 (337)
T PRK08304 180 GPRITHAT-IGKVVDLGIK-DPNDMGAAMAPAAADTIQQHFKDTGRSPEDYDLIVT 233 (337)
T ss_pred CceEEEEe-EEEEEecCCC-CcccchhhhhHHHHHHHHHHHHHcCCChhhccEEEE
Confidence 22221222 2355666654 222 2223466789999999999999999999975
No 100
>PRK05963 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.58 E-value=4.9e-14 Score=122.64 Aligned_cols=175 Identities=17% Similarity=0.109 Sum_probs=120.2
Q ss_pred hHHHHHHHHHHHHHHHCCCCCCCCCCCCeEEEEccCCCCccccccCccccchhhHhhhhhhhHHHHHHHHcCCCC-CCcc
Q psy4744 50 PLVRCFIEPCFEAILDAGINPKSLAGSNSSVYTNSCISDDESLGCDERLTTNFWLLAHVRCLLANRIAYLFDLKG-PSFT 128 (270)
Q Consensus 50 ~~~~l~l~a~~~Al~dAg~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl~G-p~~~ 128 (270)
....|+.+|+++||+++|+++++|+ -++++++.+++. ....+.+|+..||++. +++.
T Consensus 51 ~~~~la~~Aa~~aL~~ag~~~~~Id----~li~~t~~~d~~------------------~p~~a~~v~~~Lg~~~~~~~d 108 (326)
T PRK05963 51 TLSDLAASAGDMALSDAGIERSDIA----LTLLATSTPDHL------------------LPPSAPLLAHRLGLQNSGAID 108 (326)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCC----EEEEECCCCCCC------------------CCcHHHHHHHHhCCCCCceee
Confidence 4568999999999999999988887 677777655432 1234567999999954 7788
Q ss_pred ccccchhHHHHHHHHHHHHhcCCCCEEEEeeeccccCchhHHhhhcCcccCCCCCCcccCCCCCceeecCeeEEEEecCh
Q psy4744 129 IDNSWTGGIEVLRQAVQDISEGRVDTAIVGVSNLLLNANLNSLFQGLNRLSPDGKTRSFDHLANGYARSEGIVVLLLQRS 208 (270)
Q Consensus 129 v~~~cas~~~al~~A~~~i~~G~~d~~lv~g~~~~~~~~~~~~~~~~~~ls~~~~~~pfd~~~~g~~~geGA~alvL~~~ 208 (270)
|+.+|++++.||..|..+|++|. +.+||+++|..... + +|-+ ....+++||||+|+||++.
T Consensus 109 i~~~C~g~~~aL~~A~~~l~~~~-~~aLVv~~d~~s~~-----------~------~~~~-~~~~~lfGDgA~A~ll~~~ 169 (326)
T PRK05963 109 LAGACAGFLYALVLADGFVRAQG-KPVLVVAANILSRR-----------I------NMAE-RASAVLFADAAGAVVLAPS 169 (326)
T ss_pred ccchhhHHHHHHHHHHHHHHcCC-CeEEEEEechhhcc-----------C------Cccc-cCceEEEeecceEEEEEec
Confidence 99999999999999999999985 89999999873210 1 1111 2346789999999999864
Q ss_pred HHHHhhcCceEeEEEeccCC------------CCC--------C--CcCCC--------HHHHHHHHHHHHHHcCCCCCC
Q psy4744 209 ETALRSYGEVLHAESRFYGS------------LER--------P--FVGFN--------QASLVEFFTNFYQKARVNPGQ 258 (270)
Q Consensus 209 ~~A~~~~g~~~~~~~~~~~~------------~~~--------~--~~~~~--------~~~~~~a~~~al~~agi~~~d 258 (270)
+.... + .....+..++. ... . +...+ ...+.++++++|+++|++++|
T Consensus 170 ~~~~~--~-~l~~~~~t~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~d 246 (326)
T PRK05963 170 AKANS--G-VLGSQLISDGSHYDLIKIPAGGSARPFAPERDASEFLMTMQDGRAVFTEAVRMMSGASQNVLASAAMTPQD 246 (326)
T ss_pred CCCCC--c-eEEEEEEEcCCCCCeEEeCCCCcCCCCcccccccccceEecCCHHHHHHHHHHHHHHHHHHHHHcCCCHHH
Confidence 42210 1 11111111111 000 0 00000 122467889999999999999
Q ss_pred ccEEEcccCC
Q psy4744 259 VDFLEADGSA 268 (270)
Q Consensus 259 id~v~~hgtg 268 (270)
||++-+|=.+
T Consensus 247 id~~~~h~~~ 256 (326)
T PRK05963 247 IDRFFPHQAN 256 (326)
T ss_pred CCEEEeCCCC
Confidence 9999998543
No 101
>PRK04262 hypothetical protein; Provisional
Probab=99.56 E-value=3.9e-14 Score=124.19 Aligned_cols=171 Identities=16% Similarity=0.195 Sum_probs=116.4
Q ss_pred hHHHHHHHHHHHHHHHCCCCCCCCCCCCeEEEEccCCCCccccccCccccchhhHhhhhhhhHHHHHHHHcCCCC--CCc
Q psy4744 50 PLVRCFIEPCFEAILDAGINPKSLAGSNSSVYTNSCISDDESLGCDERLTTNFWLLAHVRCLLANRIAYLFDLKG--PSF 127 (270)
Q Consensus 50 ~~~~l~l~a~~~Al~dAg~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl~G--p~~ 127 (270)
....|+.+|+++||+++|+++++|+ .+++++..+++.. ...+.++...+|++. +++
T Consensus 50 ~~~~la~~Aa~~aL~~ag~~~~dId----~li~~s~~~~~~~------------------p~~a~~v~~~Lgl~~~~~~~ 107 (347)
T PRK04262 50 DTATIAVEAARNALKRAGIDPKEIG----AVYVGSESHPYAV------------------KPTATIVAEALGATPDLTAA 107 (347)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCC----EEEEEecCCCccc------------------ccHHHHHHHHcCCCCCceEE
Confidence 4678999999999999999988887 5666665443321 123457888999964 667
Q ss_pred cccccchhHHHHHHHHHHHHhcCCCCEEEEeeeccccCchhHHhhhcCcccCCCCCCcccCCCCCceeecCeeEEEEecC
Q psy4744 128 TIDNSWTGGIEVLRQAVQDISEGRVDTAIVGVSNLLLNANLNSLFQGLNRLSPDGKTRSFDHLANGYARSEGIVVLLLQR 207 (270)
Q Consensus 128 ~v~~~cas~~~al~~A~~~i~~G~~d~~lv~g~~~~~~~~~~~~~~~~~~ls~~~~~~pfd~~~~g~~~geGA~alvL~~ 207 (270)
.++.+|++++.+|..|.++|++|.++.+||+++|.... .+. + +.-+.+||||+|+||++
T Consensus 108 dv~~~C~~~~~aL~~A~~~i~sg~~~~aLVv~~e~~~~-------------~~~------~--~~~~~~GDGA~A~ll~~ 166 (347)
T PRK04262 108 DLEFACKAGTAALQAAMGLVKSGMIKYALAIGADTAQG-------------APG------D--ALEYTAAAGGAAFIIGK 166 (347)
T ss_pred EHHHhHHHHHHHHHHHHHHHHcCCCCEEEEEEEeeecc-------------CCC------C--CCCCcCCCCcEEEEEec
Confidence 89999999999999999999999999999999997210 011 0 01123599999999986
Q ss_pred hHHHHhhcCceEeEE-EeccCC-------C---CCC--CcC-C-CHHHHHHHHHHHHHHcCCCCCCccEEEcccC
Q psy4744 208 SETALRSYGEVLHAE-SRFYGS-------L---ERP--FVG-F-NQASLVEFFTNFYQKARVNPGQVDFLEADGS 267 (270)
Q Consensus 208 ~~~A~~~~g~~~~~~-~~~~~~-------~---~~~--~~~-~-~~~~~~~a~~~al~~agi~~~did~v~~hgt 267 (270)
.+...+ +.... ...+.. . ... +.. + ......++++++|+++|++++|||++-+|-.
T Consensus 167 ~~~~~~----i~~~~~~~~d~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~gl~~~dId~~v~Hq~ 237 (347)
T PRK04262 167 EEVIAE----IEATYSYTTDTPDFWRREGEPYPRHGGRFTGEPAYFKHIISAAKGLMEKLGLKPSDYDYAVFHQP 237 (347)
T ss_pred Ccccce----eeccccccccchhhcCCCCCcCCCcCceecchHHHHHHHHHHHHHHHHHhCcCHHHhceeecCCC
Confidence 432111 11110 000000 0 000 000 0 1134678899999999999999999999943
No 102
>PRK06840 hypothetical protein; Validated
Probab=99.56 E-value=1.1e-13 Score=121.05 Aligned_cols=174 Identities=17% Similarity=0.151 Sum_probs=114.8
Q ss_pred ChHHHHHHHHHHHHHHHCCCCCCCCCCCCeEEEEc-cCCCCccccccCccccchhhHhhhhhhhHHHHHHHHcCCCC-CC
Q psy4744 49 DPLVRCFIEPCFEAILDAGINPKSLAGSNSSVYTN-SCISDDESLGCDERLTTNFWLLAHVRCLLANRIAYLFDLKG-PS 126 (270)
Q Consensus 49 ~~~~~l~l~a~~~Al~dAg~~~~~~~~~~~gv~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl~G-p~ 126 (270)
.....|+.+|+++||+++|+++++|+ .+++. +...++. ....+.+++..+|++. ++
T Consensus 51 ~~~~~la~~Aa~~aL~~ag~~~~dId----~li~~~~~~~~~~------------------~p~~a~~l~~~lGl~~~~~ 108 (339)
T PRK06840 51 DHTSDMAIAAAKPALKQAGVDPAAID----VVIYIGSEHKDYP------------------VWSSAPKIQHEIGAKNAWA 108 (339)
T ss_pred CCHHHHHHHHHHHHHHHcCCCHHHCC----EEEEeccCCCCCC------------------CCchHHHHHHHhCCCCccc
Confidence 34678999999999999999988886 45433 3222221 1123567889999964 78
Q ss_pred ccccccchhHHHHHHHHHHHHhc-CCCCEEEEeeeccccCchhHHhhhcCcccCCCCCCcccCCCCCce--eecCeeEEE
Q psy4744 127 FTIDNSWTGGIEVLRQAVQDISE-GRVDTAIVGVSNLLLNANLNSLFQGLNRLSPDGKTRSFDHLANGY--ARSEGIVVL 203 (270)
Q Consensus 127 ~~v~~~cas~~~al~~A~~~i~~-G~~d~~lv~g~~~~~~~~~~~~~~~~~~ls~~~~~~pfd~~~~g~--~~geGA~al 203 (270)
+.|+.+|++++.||..|.++|++ |.++.+||++.+...... . |+.....+ .+||||+|+
T Consensus 109 ~~v~~~C~~~~~al~~A~~~l~~~g~~~~~Lvv~~~~~s~~~-----------------~-~~~~~~~~~~~~GDgAaA~ 170 (339)
T PRK06840 109 FDIMAVCASFPIALKVAKDLLYSDPSIENVLLVGGYRNSDLV-----------------D-YDNPRTRFMFNFAAGGSAA 170 (339)
T ss_pred ccccccchHHHHHHHHHHHHHhcCCCccEEEEEeeccccccc-----------------C-cCCCCeeeeccCCCceeEE
Confidence 88999999999999999999999 999999999988621110 0 11111222 369999999
Q ss_pred EecChHHHHhhcCceEeEEEeccCCC-----------CCCC--------------cCCC----------HHHHHHHHHHH
Q psy4744 204 LLQRSETALRSYGEVLHAESRFYGSL-----------ERPF--------------VGFN----------QASLVEFFTNF 248 (270)
Q Consensus 204 vL~~~~~A~~~~g~~~~~~~~~~~~~-----------~~~~--------------~~~~----------~~~~~~a~~~a 248 (270)
||++.+...+ +.......++.. .... ..+. .....++++++
T Consensus 171 ll~~~~~~~~----il~~~~~t~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 246 (339)
T PRK06840 171 LLKKDAGKNR----ILGSAIITDGSFSEDVRVPAGGTKQPASPETVENRQHYLDVIDPESMKERLDEVSIPNFLKVIREA 246 (339)
T ss_pred EEEecCCCCc----eEEEEEEEcCCccceEEecCCCcCCCCcccccccccceEEEcCcHHHHHHhHhhHHHHHHHHHHHH
Confidence 9987542211 111111111100 0000 0010 11245889999
Q ss_pred HHHcCCCCCCccEEEccc
Q psy4744 249 YQKARVNPGQVDFLEADG 266 (270)
Q Consensus 249 l~~agi~~~did~v~~hg 266 (270)
|+++|++++|||++-+|=
T Consensus 247 L~~~gl~~~did~~~~h~ 264 (339)
T PRK06840 247 LRKSGYTPKDIDYLAILH 264 (339)
T ss_pred HHHcCCCHHHCCEEEECC
Confidence 999999999999987764
No 103
>PRK12880 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=99.56 E-value=9e-14 Score=121.86 Aligned_cols=171 Identities=13% Similarity=0.054 Sum_probs=120.5
Q ss_pred hHHHHHHHHHHHHHHHCCCCCCCCCCCCeEEEEccCCCCccccccCccccchhhHhhhhhhhHHHHHHHHcCCCC--CCc
Q psy4744 50 PLVRCFIEPCFEAILDAGINPKSLAGSNSSVYTNSCISDDESLGCDERLTTNFWLLAHVRCLLANRIAYLFDLKG--PSF 127 (270)
Q Consensus 50 ~~~~l~l~a~~~Al~dAg~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl~G--p~~ 127 (270)
....|+.+|+++||+++|+++++|+ .+++++..+++. ....+.++...||++. +++
T Consensus 59 ~~~~la~~Aa~~aL~~a~~~~~dId----~lI~~t~t~d~~------------------~P~~a~~v~~~Lg~~~~~~~~ 116 (353)
T PRK12880 59 CVSDLGKHAANTLLQGLNIDKNSLD----ALIVVTQSPDFF------------------MPSTACYLHQLLNLSSKTIAF 116 (353)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCC----EEEEEcCCCCCC------------------CCcHHHHHHHHhCCCCCceEE
Confidence 4678999999999999999998887 677877776653 2356788999999963 678
Q ss_pred cccccchhHHHHHHHHHHHHhcCCCCEEEEeeeccccCchhHHhhhcCcccCCCCCCcccCCCCCceeecCeeEEEEecC
Q psy4744 128 TIDNSWTGGIEVLRQAVQDISEGRVDTAIVGVSNLLLNANLNSLFQGLNRLSPDGKTRSFDHLANGYARSEGIVVLLLQR 207 (270)
Q Consensus 128 ~v~~~cas~~~al~~A~~~i~~G~~d~~lv~g~~~~~~~~~~~~~~~~~~ls~~~~~~pfd~~~~g~~~geGA~alvL~~ 207 (270)
.|+.+|++++.+|..|..+|++|..+ +||+++|... .. + .|-| .....++||||+|+||++
T Consensus 117 di~~~C~g~~~aL~~A~~~i~~~~~~-~LVv~~e~~S-~~----------~------~~~d-~~~~~lFGDGAaA~vl~~ 177 (353)
T PRK12880 117 DLGQACAGYLYGLFVAHSLIQSGLGK-ILLICGDTLS-KF----------I------HPKN-MNLAPIFGDGVSATLIEK 177 (353)
T ss_pred ehhhhhHHHHHHHHHHHHHHHcCCCC-EEEEEehhhh-cc----------C------Cccc-CCceeeecccceEEEEEe
Confidence 89999999999999999999999999 8988888721 11 0 1111 123468999999999986
Q ss_pred hHHHHhhcCceEeEEEeccCCCCC------------C-------C------------cCCC-H-------HHHHHHHHHH
Q psy4744 208 SETALRSYGEVLHAESRFYGSLER------------P-------F------------VGFN-Q-------ASLVEFFTNF 248 (270)
Q Consensus 208 ~~~A~~~~g~~~~~~~~~~~~~~~------------~-------~------------~~~~-~-------~~~~~a~~~a 248 (270)
.+... +. ..+..++...+ . . ...+ . ....++++++
T Consensus 178 ~~~~~---~~---~~~~~~~~~~~~~~~p~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~ 251 (353)
T PRK12880 178 TDFNE---AF---FELGSDGKYFDKLIIPKGAMRIPKADIFNDDSLMQTEEFRQLENLYMDGANIFNMALECEPKSFKEI 251 (353)
T ss_pred cCCCC---ce---EEEEecCCCCCeEEecCCCcCCCccccccccccccccccccCceEEEcCHHHHHHHHHHHHHHHHHH
Confidence 43221 10 01111111000 0 0 0011 1 1235688999
Q ss_pred HHHcCCCCCCccEEEcccC
Q psy4744 249 YQKARVNPGQVDFLEADGS 267 (270)
Q Consensus 249 l~~agi~~~did~v~~hgt 267 (270)
|+++|++++|||++-+|=.
T Consensus 252 L~~~gl~~~did~~v~HQ~ 270 (353)
T PRK12880 252 LEFSKVDEKDIAFHLFHQS 270 (353)
T ss_pred HHHcCCCHHHCCEEEECCC
Confidence 9999999999999999954
No 104
>PRK07937 lipid-transfer protein; Provisional
Probab=99.50 E-value=4e-13 Score=117.30 Aligned_cols=190 Identities=14% Similarity=-0.024 Sum_probs=112.0
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCeEEEEccCCCCccccccCccccchhhHhhhhhhhHHHHHHHHcCCC-C-CCcc
Q psy4744 51 LVRCFIEPCFEAILDAGINPKSLAGSNSSVYTNSCISDDESLGCDERLTTNFWLLAHVRCLLANRIAYLFDLK-G-PSFT 128 (270)
Q Consensus 51 ~~~l~l~a~~~Al~dAg~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl~-G-p~~~ 128 (270)
...|+.+|+++||+|||+++++|| +++.+.. +..... ... ...+...+|+. + |...
T Consensus 24 ~~el~~eA~~~Al~DAgl~~~dID----~~~~~~~--~~~~~~-------------~~~---~~~~~~~~G~~~~~~~~~ 81 (352)
T PRK07937 24 GVEMLMPCFAELYAELGITKSDIG----FWCSGSS--DYLAGR-------------AFS---FISAIDSIGAVPPINESH 81 (352)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC----EEEEEcc--cccccc-------------ccc---hhhHHhhccCCCCCceEE
Confidence 468999999999999999999998 4433321 110000 000 01234456663 2 3334
Q ss_pred ccccchhHHHHHHHHHHHHhcCCCCEEEEeeeccccCchhH--H------hh-hcCcccC--------------------
Q psy4744 129 IDNSWTGGIEVLRQAVQDISEGRVDTAIVGVSNLLLNANLN--S------LF-QGLNRLS-------------------- 179 (270)
Q Consensus 129 v~~~cas~~~al~~A~~~i~~G~~d~~lv~g~~~~~~~~~~--~------~~-~~~~~ls-------------------- 179 (270)
++ ++|..+|..|++.|++|++|+|||.|.+.+...... . .+ ...|...
T Consensus 82 v~---~~g~~a~~~A~~aI~sG~~d~VLv~g~~k~~~~~~~~~~~~~~~~~~~~p~G~~~~~~~Al~a~~ym~~yG~t~e 158 (352)
T PRK07937 82 VE---MDAAWALYEAWVKLLTGEVDTALVYGFGKSSAGTLRRVLALQLDPYTVAPLWPDSVSMAGLQARAGLDAGKWTEE 158 (352)
T ss_pred ec---CcHHHHHHHHHHHHhcCCCCEEEEEEecccCccchhhhhhccCCcceeccCCCchHHHHHHHHHHHHHHhCCCHH
Confidence 44 468889999999999999999999999864210000 0 00 0111100
Q ss_pred ----------CCCCCcccCCCC-------------------CceeecCeeEEEEecChHHHHhhcCceEeEEEeccCCCC
Q psy4744 180 ----------PDGKTRSFDHLA-------------------NGYARSEGIVVLLLQRSETALRSYGEVLHAESRFYGSLE 230 (270)
Q Consensus 180 ----------~~~~~~pfd~~~-------------------~g~~~geGA~alvL~~~~~A~~~~g~~~~~~~~~~~~~~ 230 (270)
.+...+|+...+ +...++|||+++||.+++.|++. +..+ +.+.+.+...
T Consensus 159 ~lA~vavk~r~nA~~NP~A~~rit~edvl~s~~ia~PL~l~d~~~~~DGAaA~vl~s~~~A~~l-~~~p-v~I~g~~~~~ 236 (352)
T PRK07937 159 QMAEVAARSRADARRNPSAEPSISVDELLARPYFADPLRRHDIAPITDGAAAVVLAAGDRAREL-RERP-AWITGIEHRI 236 (352)
T ss_pred HHHHHHHHHHHHHhhCchhhccCCHHHHhcCCcccCCchhhcCCCCCCcceEEEEecHHHHHHc-CCCc-EEEEEEEEee
Confidence 122344444332 22246999999999999999875 4333 5555555432
Q ss_pred CCCcCC-CHHHHHHHHHHHHHH-cCCCCCCccEEEcccC
Q psy4744 231 RPFVGF-NQASLVEFFTNFYQK-ARVNPGQVDFLEADGS 267 (270)
Q Consensus 231 ~~~~~~-~~~~~~~a~~~al~~-agi~~~did~v~~hgt 267 (270)
+..... .......++++++++ ||++|+|||++|+|-.
T Consensus 237 ~~~~~~~~d~~~~~~~~~a~~~aAgi~~~diD~~Ei~D~ 275 (352)
T PRK07937 237 ESPSLGARDLTRSPSTALAAEAATGGDAGGVDVAELHAP 275 (352)
T ss_pred CCccccccccccHHHHHHHHHHhcCCCHHHCCEEEEeCC
Confidence 221110 001123344555555 5999999999999964
No 105
>cd00831 CHS_like Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs. PKS generate an array of different products, dependent on the nature of the starter molecule. They share a common chemical strategy, after the starter molecule is loaded onto the active site cysteine, a carboxylative condensation reation extends the polyketide chain. Plant-specific PKS are dimeric iterative PKSs, using coenzyme A esters to deliver substrate to the active site, but they differ in the choice of starter molecule and the number of condensation reactions.
Probab=99.50 E-value=3.1e-13 Score=119.16 Aligned_cols=188 Identities=13% Similarity=0.082 Sum_probs=123.1
Q ss_pred HHhhcChHHHHHHHHHHHHHHHCCCCCCCCCCCCeEEEEccCCCCccccccCccccchhhHhhhhhhhHHHHHHHHcCCC
Q psy4744 44 LANVLDPLVRCFIEPCFEAILDAGINPKSLAGSNSSVYTNSCISDDESLGCDERLTTNFWLLAHVRCLLANRIAYLFDLK 123 (270)
Q Consensus 44 ~~~~~~~~~~l~l~a~~~Al~dAg~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl~ 123 (270)
..........|+.+|+++||+++|+++++|+ .++++++.+ +. ....+.+|...+|++
T Consensus 78 ~~~~~~~~~~la~~Aa~~aL~~a~~~~~~Id----~li~~s~~~-~~------------------~P~~a~~i~~~lgl~ 134 (361)
T cd00831 78 NDIALEEARELAEEAARGALDEAGLRPSDID----HLVVNTSTG-NP------------------TPSLDAMLINRLGLR 134 (361)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHhCCCHHHCC----EEEEECCCC-CC------------------CCCHHHHHHHHhCCC
Confidence 3333445779999999999999999988887 566665532 21 234566899999996
Q ss_pred C--CCcccc-ccchhHHHHHHHHHHHHhcCCCCEEEEeeeccccCchhHHhhhcCcccCCCCCCcccCCCCCceeecCee
Q psy4744 124 G--PSFTID-NSWTGGIEVLRQAVQDISEGRVDTAIVGVSNLLLNANLNSLFQGLNRLSPDGKTRSFDHLANGYARSEGI 200 (270)
Q Consensus 124 G--p~~~v~-~~cas~~~al~~A~~~i~~G~~d~~lv~g~~~~~~~~~~~~~~~~~~ls~~~~~~pfd~~~~g~~~geGA 200 (270)
. +++.|+ .+|++++.||..|..+|++|..+.+||+++|...... .++. ..+..-...++||||
T Consensus 135 ~~~~~~dv~~~~C~~~~~al~~A~~~~~~~~~~~aLvv~~e~~s~~~-----------~~~d---~~~~~~~~~lfGDga 200 (361)
T cd00831 135 PDVKRYNLGGMGCSAGAIALDLAKDLLEANPGARVLVVSTELCSLWY-----------RGPD---HRSMLVGNALFGDGA 200 (361)
T ss_pred cccchhccccccchhHHHHHHHHHHHHHHCCCCEEEEEEeeccccee-----------CCCC---cHHHhhhhhhccCCc
Confidence 3 577898 8999999999999999999999999999999833210 0000 000000356799999
Q ss_pred EEEEecChHHHHh--hcC-ceEeEE---EeccCCC------CCCC---cCC---C--HHHHHHHHHHHHHHc--CCCCCC
Q psy4744 201 VVLLLQRSETALR--SYG-EVLHAE---SRFYGSL------ERPF---VGF---N--QASLVEFFTNFYQKA--RVNPGQ 258 (270)
Q Consensus 201 ~alvL~~~~~A~~--~~g-~~~~~~---~~~~~~~------~~~~---~~~---~--~~~~~~a~~~al~~a--gi~~~d 258 (270)
+|+||++.+.... ... ...... +-..+.. ...+ ..+ . .....++++++|+++ |++++|
T Consensus 201 aA~ll~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~~~L~~~~~g~~~~d 280 (361)
T cd00831 201 AAVLLSNDPRDRRRERPLFELVRAASTLLPDSEDAMGWHLGEEGLTFVLSRDVPRLVEKNLERVLRKLLARLGIGLFKLA 280 (361)
T ss_pred eEEEEEcCCCcccccccceeeecccceeeecCCCceEEEEEcceEEEEeChhHHHHHHHHHHHHHHHHhccccCCCcccc
Confidence 9999997654310 000 000000 0000000 0000 001 0 134577899999999 999999
Q ss_pred ccEEEcccCC
Q psy4744 259 VDFLEADGSA 268 (270)
Q Consensus 259 id~v~~hgtg 268 (270)
||++-+|-.+
T Consensus 281 id~~~~H~~~ 290 (361)
T cd00831 281 FDHWCVHPGG 290 (361)
T ss_pred ceEEEECCCC
Confidence 9999999654
No 106
>PLN03171 chalcone synthase-like protein; Provisional
Probab=99.49 E-value=8.8e-13 Score=117.29 Aligned_cols=133 Identities=17% Similarity=0.137 Sum_probs=95.4
Q ss_pred HHHhhcChHHHHHHHHHHHHHHHCCCCCCCCCCCCeEEEEccCCCCccccccCccccchhhHhhhhhhhHHHHHHHHcCC
Q psy4744 43 RLANVLDPLVRCFIEPCFEAILDAGINPKSLAGSNSSVYTNSCISDDESLGCDERLTTNFWLLAHVRCLLANRIAYLFDL 122 (270)
Q Consensus 43 ~~~~~~~~~~~l~l~a~~~Al~dAg~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl 122 (270)
+..........|+.+|+++||+++|+++++|+ .+++.++.+.+ ....+..+...||+
T Consensus 100 r~~~~~~~a~~la~~Aa~~aL~~ag~~~~dId----~li~~t~t~~~-------------------~P~~a~~v~~~LGl 156 (399)
T PLN03171 100 RLDIAADAVPELAAEAAKKAIAEWGRPAADIT----HLVVTTNSGAH-------------------IPGVDFRLVPLLGL 156 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCC----EEEEEcCCCCC-------------------CCchHHHHHHHhCC
Confidence 33333456778999999999999999998887 67777665433 12456678999999
Q ss_pred CCC---CccccccchhHHHHHHHHHHHHhcCCCCEEEEeeeccccCchhHHhhhcCcccCCCCCCcccCCCCCceeecCe
Q psy4744 123 KGP---SFTIDNSWTGGIEVLRQAVQDISEGRVDTAIVGVSNLLLNANLNSLFQGLNRLSPDGKTRSFDHLANGYARSEG 199 (270)
Q Consensus 123 ~Gp---~~~v~~~cas~~~al~~A~~~i~~G~~d~~lv~g~~~~~~~~~~~~~~~~~~ls~~~~~~pfd~~~~g~~~geG 199 (270)
+.. .+.+..+|++++.+|..|..+|++|....|||+++|....-. .+.... .++..-.+.++|||
T Consensus 157 ~~~~~~~~~~~~gC~g~~~aL~~A~~li~~~~~~~vLVv~~e~~s~~~-----------~~~d~~-~~~~~v~~~LFGDG 224 (399)
T PLN03171 157 RPSVRRTMLHLNGCFAGAAALRLAKDLAENNRGARVLVVAAEITLLLF-----------NGPDEG-CFQTLLNQGLFGDG 224 (399)
T ss_pred CcccceeeccCCccHHHHHHHHHHHHHHHhCCCCeEEEEEEecccccc-----------CCCCcc-cHHhhhccccccCc
Confidence 743 355677999999999999999999999999999999822111 000000 01111126689999
Q ss_pred eEEEEecChHH
Q psy4744 200 IVVLLLQRSET 210 (270)
Q Consensus 200 A~alvL~~~~~ 210 (270)
|+|+||++.+.
T Consensus 225 AaA~vl~~~~~ 235 (399)
T PLN03171 225 AAAVIVGADAD 235 (399)
T ss_pred cEEEEEecCCC
Confidence 99999997543
No 107
>PLN03172 chalcone synthase family protein; Provisional
Probab=99.47 E-value=1.6e-12 Score=115.26 Aligned_cols=194 Identities=15% Similarity=0.097 Sum_probs=124.3
Q ss_pred CCHHHHhhcChHHHHHHHHHHHHHHHCCCCCCCCCCCCeEEEEccCCCCccccccCccccchhhHhhhhhhhHHHHHHHH
Q psy4744 40 LHSRLANVLDPLVRCFIEPCFEAILDAGINPKSLAGSNSSVYTNSCISDDESLGCDERLTTNFWLLAHVRCLLANRIAYL 119 (270)
Q Consensus 40 ~~~~~~~~~~~~~~l~l~a~~~Al~dAg~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~ 119 (270)
+..+......-...|+.+|+++||+++|+++++|+ .+++.++.+.. ....+.++...
T Consensus 91 ~~~r~~~~~~~a~~La~~Aa~~aL~~ag~~~~dId----~ii~~t~t~~~-------------------~P~~a~~l~~~ 147 (393)
T PLN03172 91 LDARQDMVVVEVPKLGKEAAAKAIKEWGQPKSKIT----HLVFCTTSGVD-------------------MPGADYQLTKL 147 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCC----EEEEEccCCCc-------------------CchHHHHHHHH
Confidence 44455555556779999999999999999988876 56666654321 12467789999
Q ss_pred cCCCCC---CccccccchhHHHHHHHHHHHHhcCCCCEEEEeeeccccCchhHHhhhcCcccCCCCCCcccCCCCCceee
Q psy4744 120 FDLKGP---SFTIDNSWTGGIEVLRQAVQDISEGRVDTAIVGVSNLLLNANLNSLFQGLNRLSPDGKTRSFDHLANGYAR 196 (270)
Q Consensus 120 ~gl~Gp---~~~v~~~cas~~~al~~A~~~i~~G~~d~~lv~g~~~~~~~~~~~~~~~~~~ls~~~~~~pfd~~~~g~~~ 196 (270)
||++.- .+.++.+|++++.+|..|...++++....|||+++|...... . .++. +..+..-...++
T Consensus 148 LGl~~~~~~~~~~~~gC~g~~~aL~~A~~~~~~~~~~~vLVV~~E~~S~~~--~--------~~~d--~~~~~~v~~~LF 215 (393)
T PLN03172 148 LGLKPSVKRFMMYQQGCFAGGTVLRLAKDLAENNAGSRVLVVCSEITAVTF--R--------GPSD--THLDSLVGQALF 215 (393)
T ss_pred hCCCCCceEEeeeCCchHHHHHHHHHHHHHHHcCCCCeEEEEEEehhhhhh--c--------cccc--ccHHhhhccchh
Confidence 999763 245789999999999999999999999999999999832100 0 0000 000001234679
Q ss_pred cCeeEEEEecChHHHH-hhcC-ceEeEE----EeccCC-----CCCCC---cCCC-----HHHHHHHHHHHHHHcCCCCC
Q psy4744 197 SEGIVVLLLQRSETAL-RSYG-EVLHAE----SRFYGS-----LERPF---VGFN-----QASLVEFFTNFYQKARVNPG 257 (270)
Q Consensus 197 geGA~alvL~~~~~A~-~~~g-~~~~~~----~~~~~~-----~~~~~---~~~~-----~~~~~~a~~~al~~agi~~~ 257 (270)
||||+|+||+..+... .... .+.... ....+. ...++ ..+. ...+.+.+++.|++.|+++.
T Consensus 216 GDGAaAvVl~~~~~~~~~~~~~~i~~~~~~~~~~t~~~~~~~i~~~G~~~~l~~~vp~~~~~~i~~~~~~~L~~~gl~~~ 295 (393)
T PLN03172 216 GDGAAAVIIGADPDTKIERPLFEIVSAAQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLVEAFAPIGINDW 295 (393)
T ss_pred cCceEEEEEecCCCCcccCceeEEeeeccEEecCCcccccceEEcCCcEEEEechHHHHHHHHHHHHHHHHhhhcCCCcc
Confidence 9999999998743221 0000 011110 000010 00111 0011 13356788899999999999
Q ss_pred CccEEEcccCC
Q psy4744 258 QVDFLEADGSA 268 (270)
Q Consensus 258 did~v~~hgtg 268 (270)
||+++-+|=-|
T Consensus 296 di~~~~~Hqgg 306 (393)
T PLN03172 296 NSIFWIAHPGG 306 (393)
T ss_pred ccceEEecCCc
Confidence 99999988543
No 108
>PRK12404 stage V sporulation protein AD; Provisional
Probab=99.47 E-value=1.8e-12 Score=109.08 Aligned_cols=176 Identities=13% Similarity=0.137 Sum_probs=123.8
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCeEEEEccCCCCccccccCccccchhhHhhhhhhhHHHHHHHHcCCCCCCcccc
Q psy4744 51 LVRCFIEPCFEAILDAGINPKSLAGSNSSVYTNSCISDDESLGCDERLTTNFWLLAHVRCLLANRIAYLFDLKGPSFTID 130 (270)
Q Consensus 51 ~~~l~l~a~~~Al~dAg~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl~Gp~~~v~ 130 (270)
...|+.+|+++||++||+++++|+ -+++|+.... ..++..++..||+ |.+.|+
T Consensus 54 E~~L~~EA~~~AL~kAGI~~~DID----~i~vGdL~nQ---------------------~ipssfvar~LGI--P~~gV~ 106 (334)
T PRK12404 54 ERKLLEEACSRAIEKAKLRKEDIQ----FFLAGDLMNQ---------------------ITPTSFAARTLGI--PYLGLF 106 (334)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC----EEEEEecCCC---------------------cCcHHHHHHHhCC--Ccccee
Confidence 557999999999999999999988 5666654311 1233467788886 889999
Q ss_pred ccchhHHHHHHHHHHHHhcCCCCEEEEeeeccccCchhHHhhhcCcccCCCCCCcccCCCCCceeecCeeEEEEecChHH
Q psy4744 131 NSWTGGIEVLRQAVQDISEGRVDTAIVGVSNLLLNANLNSLFQGLNRLSPDGKTRSFDHLANGYARSEGIVVLLLQRSET 210 (270)
Q Consensus 131 ~~cas~~~al~~A~~~i~~G~~d~~lv~g~~~~~~~~~~~~~~~~~~ls~~~~~~pfd~~~~g~~~geGA~alvL~~~~~ 210 (270)
++|+|+..||..|+.+|++|.+|.|||+.+..+.+..-.+.| -...+..||.... =+ -=|||++||.+...
T Consensus 107 gACSTg~eAL~lAa~~VaSG~Ad~VLavtsSH~~~aErqfR~-----P~eyG~Qrp~taq--wT--vTgaga~~l~~~~~ 177 (334)
T PRK12404 107 GACSTSMEGLALAALIVNSGGAKYVLTGASSHNAAVEKQFRY-----PTEYGGQKPPTAQ--WT--VTGAGAAILSKTGD 177 (334)
T ss_pred ecCHHHHHHHHHHHHHHHcCCCCEEEEEeCcccchhhhhccC-----cccccCcCCCccc--EE--EEceEEEEEecCCC
Confidence 999999999999999999999999999988875555433322 1223445554432 12 23688888876532
Q ss_pred HHhhcCceEeEEEeccCCCCCCC--cCCCHHHHHHHHHHHHHHcCCCCCCccEEEc
Q psy4744 211 ALRSYGEVLHAESRFYGSLERPF--VGFNQASLVEFFTNFYQKARVNPGQVDFLEA 264 (270)
Q Consensus 211 A~~~~g~~~~~~~~~~~~~~~~~--~~~~~~~~~~a~~~al~~agi~~~did~v~~ 264 (270)
..++.++. -+++..+|.. +++ -.-..++..+.|.+-+++.|.+|+|.|.|.+
T Consensus 178 ~~~i~~~T-~Gkv~D~g~~-d~~nMGaaMAPAA~dti~~h~~d~~~~~~~yDlI~T 231 (334)
T PRK12404 178 GPRVTSAT-IGRVVDMGLT-DPFNMGGAMAPAAVDTIEAHLRDRQIDASYYDLIVT 231 (334)
T ss_pred CceEEEEE-EEEEEecCCC-CcccchhhhhHHHHHHHHHHHHHhCCChhhccEEEE
Confidence 22221222 2356666654 232 2223466789999999999999999999875
No 109
>KOG1391|consensus
Probab=99.46 E-value=2.1e-13 Score=109.93 Aligned_cols=185 Identities=15% Similarity=0.195 Sum_probs=129.0
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCeEEEEccCCCCccccccCccccchhhHhhhhhhhHHHHHHHHcCCC------C
Q psy4744 51 LVRCFIEPCFEAILDAGINPKSLAGSNSSVYTNSCISDDESLGCDERLTTNFWLLAHVRCLLANRIAYLFDLK------G 124 (270)
Q Consensus 51 ~~~l~l~a~~~Al~dAg~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl~------G 124 (270)
+++|...|++.||+.+++.++.+|...+|.++.++..+. +++.+.||+ -
T Consensus 28 aTdL~~~AakAAL~aa~v~~e~VD~VI~GNV~aSSsDgI-------------------------Yl~RHvGL~~GvP~e~ 82 (396)
T KOG1391|consen 28 ATDLGVVAAKAALKAANVGAEAVDHVIMGNVLASSSDGI-------------------------YLARHVGLRVGVPKET 82 (396)
T ss_pred hhhHHHHHHHHHHhhcCCChhhcceEEEeeeeeccCCce-------------------------EeeeccccccCCcCcc
Confidence 456778899999999999999999777777777665432 144455553 2
Q ss_pred CCccccccchhHHHHHHHHHHHHhcCCCCEEEEeeeccccCchhHHh-------------------------hhc--Ccc
Q psy4744 125 PSFTIDNSWTGGIEVLRQAVQDISEGRVDTAIVGVSNLLLNANLNSL-------------------------FQG--LNR 177 (270)
Q Consensus 125 p~~~v~~~cas~~~al~~A~~~i~~G~~d~~lv~g~~~~~~~~~~~~-------------------------~~~--~~~ 177 (270)
|..+|+.-|.||.++|.++++.|.-|+++++|++|+|.|........ +-+ +.+
T Consensus 83 pALtiNRLCGSGFQsiVNgaQ~I~vgea~ivL~GGtEnMSq~Pf~vRnvRFGT~LG~~y~lED~LW~sLtD~y~kLpMa~ 162 (396)
T KOG1391|consen 83 PALTINRLCGSGFQSIVNGAQEICVGEAEIVLCGGTENMSQAPFCVRNVRFGTKLGSDYKLEDSLWVSLTDQYVKLPMAM 162 (396)
T ss_pred CceeehhhhcccHHHHHhhHHHhhcCcceEEEecCccccccCcceeeeeeeccccccccchhhhHhhhccchhhhcchhh
Confidence 88999999999999999999999999999999999987553221000 000 000
Q ss_pred c---------------------C--------------------------------CCCCCcc-------------cCCCC
Q psy4744 178 L---------------------S--------------------------------PDGKTRS-------------FDHLA 191 (270)
Q Consensus 178 l---------------------s--------------------------------~~~~~~p-------------fd~~~ 191 (270)
. | -+++.|| |- .
T Consensus 163 TAEnL~~qyKisRee~DefaL~SQ~~Wkkaq~aG~fn~Ei~pI~~K~kkge~~f~vDEHpRp~TT~E~L~KLppvFk--K 240 (396)
T KOG1391|consen 163 TAENLAVQYKISREECDEFALQSQQRWKKAQDAGYFNDEIAPIEVKTKKGEQTFQVDEHPRPQTTLEQLQKLPPVFK--K 240 (396)
T ss_pred hHHHhhhhheecHHHhhHHHhhhHHHHHhhhhcCcccccccceEEeeccCceeeEecCCCCccchHHHHhhCCchhc--c
Confidence 0 0 1223343 22 2
Q ss_pred Ccee-------ecCeeEEEEecChHHHHhhcCceEeEEEeccCCC-CCCCcCCCHHHHHHHHHHHHHHcCCCCCCccEEE
Q psy4744 192 NGYA-------RSEGIVVLLLQRSETALRSYGEVLHAESRFYGSL-ERPFVGFNQASLVEFFTNFYQKARVNPGQVDFLE 263 (270)
Q Consensus 192 ~g~~-------~geGA~alvL~~~~~A~~~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~a~~~al~~agi~~~did~v~ 263 (270)
+|++ ++|||+++|+.+++..++. ...+.+++..+... .++ ....-+...+|+.+|+++|+..+|||.||
T Consensus 241 dG~VtAGnASGi~DGA~AvivAsEdavK~~-NlkPLARiVays~vGcdP--~IMGIGPvPAI~~vLKksGlkl~DiDl~E 317 (396)
T KOG1391|consen 241 DGTVTAGNASGIADGAGAVIVASEDAVKKH-NLKPLARIVAYSVVGCDP--SIMGIGPVPAISGVLKKSGLKLKDIDLVE 317 (396)
T ss_pred CCeeeccccccccCCceeEEEechhHHhhc-CCchhhhhheeeeeccCh--hhccccCcHHHHHHHHHcCCcccccceEE
Confidence 3443 5899999999998877654 67777777665532 111 11223457889999999999999999999
Q ss_pred cc
Q psy4744 264 AD 265 (270)
Q Consensus 264 ~h 265 (270)
.+
T Consensus 318 vN 319 (396)
T KOG1391|consen 318 VN 319 (396)
T ss_pred ec
Confidence 65
No 110
>PLN03170 chalcone synthase; Provisional
Probab=99.45 E-value=2.9e-12 Score=113.94 Aligned_cols=194 Identities=13% Similarity=0.086 Sum_probs=124.6
Q ss_pred CCHHHHhhcChHHHHHHHHHHHHHHHCCCCCCCCCCCCeEEEEccCCCCccccccCccccchhhHhhhhhhhHHHHHHHH
Q psy4744 40 LHSRLANVLDPLVRCFIEPCFEAILDAGINPKSLAGSNSSVYTNSCISDDESLGCDERLTTNFWLLAHVRCLLANRIAYL 119 (270)
Q Consensus 40 ~~~~~~~~~~~~~~l~l~a~~~Al~dAg~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~ 119 (270)
+..+......-...|+.+|+++||+++|+++++|+ .+++.++.+.. ...++.+|...
T Consensus 95 ~~~r~~~~~~~a~~La~~Aa~~AL~~ag~~~~dId----~lI~~T~Tg~~-------------------~Ps~a~~l~~~ 151 (401)
T PLN03170 95 LDARQDIVVVEVPKLGKAAAQKAIKEWGQPKSKIT----HLVFCTTSGVD-------------------MPGADYQLTKM 151 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCC----EEEEEccCCCC-------------------CChHHHHHHHH
Confidence 44444444555668999999999999999988876 56666554321 12467789999
Q ss_pred cCCCCC---CccccccchhHHHHHHHHHHHHhcCCCCEEEEeeeccccCchhHHhhhcCcccCCCCCCcccCCCCCceee
Q psy4744 120 FDLKGP---SFTIDNSWTGGIEVLRQAVQDISEGRVDTAIVGVSNLLLNANLNSLFQGLNRLSPDGKTRSFDHLANGYAR 196 (270)
Q Consensus 120 ~gl~Gp---~~~v~~~cas~~~al~~A~~~i~~G~~d~~lv~g~~~~~~~~~~~~~~~~~~ls~~~~~~pfd~~~~g~~~ 196 (270)
||++.- .+.++.+|++++.+|..|...++++....|||+++|... .. +. .++. .+ .+......++
T Consensus 152 LGl~~~~~r~~d~~~gC~G~~~aL~~A~~l~~~~~~~~vLVV~~E~~S-~~----~~-----~~~~-~~-~~~~~~~~LF 219 (401)
T PLN03170 152 LGLRPSVNRLMMYQQGCFAGGTVLRVAKDLAENNRGARVLVVCSEITA-VT----FR-----GPSE-SH-LDSMVGQALF 219 (401)
T ss_pred hCcCcccHHHHhhcChhHHHHHHHHHHHHHHHcCCCCeEEEEEEehhh-hc----cC-----Cccc-ch-hhhhhhhhhh
Confidence 999753 478999999999999999999999999999999999832 11 00 0000 00 1111224589
Q ss_pred cCeeEEEEecChHHHH-hhcCceEeEE----Ee-ccCC-----CCCCC---cCCC-----HHHHHHHHHHHHHHcCCCCC
Q psy4744 197 SEGIVVLLLQRSETAL-RSYGEVLHAE----SR-FYGS-----LERPF---VGFN-----QASLVEFFTNFYQKARVNPG 257 (270)
Q Consensus 197 geGA~alvL~~~~~A~-~~~g~~~~~~----~~-~~~~-----~~~~~---~~~~-----~~~~~~a~~~al~~agi~~~ 257 (270)
||||+|+||++.+... ......+... +- ..+. ...++ ..+. ...+.+.++++|+++|++++
T Consensus 220 GDGAaAvVl~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~i~~~G~~~~l~~~vp~~~~~~i~~~v~~~L~~~gl~~~ 299 (401)
T PLN03170 220 GDGAAAVIVGADPDERVERPLFQLVSASQTILPDSEGAIDGHLREVGLTFHLLKDVPGLISKNIERSLEEAFKPLGITDY 299 (401)
T ss_pred hceeEEEEEecCCcccccCCceEEeeccceEecCCcccccceEEcCCeEEEEehHHHHHHHHHHHHHHHHHHHhcCCCcc
Confidence 9999999998743221 0000001100 00 0000 00111 0011 13356788999999999999
Q ss_pred CccEEEcccCC
Q psy4744 258 QVDFLEADGSA 268 (270)
Q Consensus 258 did~v~~hgtg 268 (270)
||+++-+|=-|
T Consensus 300 di~~~v~Hqgg 310 (401)
T PLN03170 300 NSIFWVAHPGG 310 (401)
T ss_pred ccCeEEecCCc
Confidence 99999888543
No 111
>PLN03169 chalcone synthase family protein; Provisional
Probab=99.45 E-value=3.7e-12 Score=113.11 Aligned_cols=183 Identities=14% Similarity=0.141 Sum_probs=118.5
Q ss_pred ChHHHHHHHHHHHHHHHCCCCCCCCCCCCeEEEEccCCCCccccccCccccchhhHhhhhhhhHHHHHHHHcCCCCC---
Q psy4744 49 DPLVRCFIEPCFEAILDAGINPKSLAGSNSSVYTNSCISDDESLGCDERLTTNFWLLAHVRCLLANRIAYLFDLKGP--- 125 (270)
Q Consensus 49 ~~~~~l~l~a~~~Al~dAg~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl~Gp--- 125 (270)
.....|+.+|+++||+++|+++++|+ .+++.++. ++. ....+..|...||++..
T Consensus 104 e~~~~La~~Aa~~aL~~ag~~~~dId----~lI~~t~t-~~~------------------~P~~a~~l~~~LGl~~~~~~ 160 (391)
T PLN03169 104 EAVTQMAVEASLACIKEWGRPVSDIT----HLVYVSSS-EAR------------------LPGGDLYLAKQLGLSPDVQR 160 (391)
T ss_pred HHHHHHHHHHHHHHHHHhCCCHHHCC----EEEEECcC-CCC------------------CCcHHHHHHHHhCcCCccee
Confidence 44678999999999999999988887 56666653 432 12456689999999642
Q ss_pred CccccccchhHHHHHHHHHHHHhcCCCCEEEEeeeccccCchhHHhhhcCcccCCCCCCcccCCCCCceeecCeeEEEEe
Q psy4744 126 SFTIDNSWTGGIEVLRQAVQDISEGRVDTAIVGVSNLLLNANLNSLFQGLNRLSPDGKTRSFDHLANGYARSEGIVVLLL 205 (270)
Q Consensus 126 ~~~v~~~cas~~~al~~A~~~i~~G~~d~~lv~g~~~~~~~~~~~~~~~~~~ls~~~~~~pfd~~~~g~~~geGA~alvL 205 (270)
.+.++.+|++++.+|..|..+|++|....|||+++|... .. +. .+. ..+ ++......++||||+|+||
T Consensus 161 ~~d~~~gC~g~~~aL~~A~~~~~~~~~~~vLvv~~e~~s-~~----~~-----~~~-~~~-~~d~~~~~lFGDGAaA~vl 228 (391)
T PLN03169 161 VMLYFLGCSGGVAGLRVAKDIAENNPGSRVLLTTSETTI-LG----FR-----PPS-PDR-PYDLVGAALFGDGAAAVII 228 (391)
T ss_pred eecccChhHHHHHHHHHHHHHHHhCCCCeEEEEEEEcCh-hh----cc-----CCC-ccc-hhhhhhhhhccCceEEEEE
Confidence 477899999999999999999999999999999999831 11 00 000 001 1122344689999999999
Q ss_pred cChHHHH-hhcCce-EeEEEe--ccCCC--------CCCC------cCCC--HHHHHHHHHHHHHHcCCCCCCcc--EEE
Q psy4744 206 QRSETAL-RSYGEV-LHAESR--FYGSL--------ERPF------VGFN--QASLVEFFTNFYQKARVNPGQVD--FLE 263 (270)
Q Consensus 206 ~~~~~A~-~~~g~~-~~~~~~--~~~~~--------~~~~------~~~~--~~~~~~a~~~al~~agi~~~did--~v~ 263 (270)
+..+... .. +.. ...... -.+.. ..++ ..|. ...+.++++++|+++|++++||| ++-
T Consensus 229 ~~~~~~~~~~-~~~~l~~~~~~~ip~~~~~~~~~~~~~g~~~~~g~~v~~~~~~~~~~~i~~~L~~~gl~~~did~~~~v 307 (391)
T PLN03169 229 GADPIPVSES-PFFELHTAIQQFLPGTEKTIDGRLTEEGINFKLGRELPQKIEDNIEGFCKKLMKKAGLVEKDYNDLFWA 307 (391)
T ss_pred ecCCCcccCC-cceEEEeeeeeEcCCCccccCceecCCceEEEECcHHHHHHHHHHHHHHHHHHHHcCCCCCCCCcceEE
Confidence 8754321 01 100 000000 00000 0000 0011 13356788999999999999999 777
Q ss_pred cccC
Q psy4744 264 ADGS 267 (270)
Q Consensus 264 ~hgt 267 (270)
.|=.
T Consensus 308 ~Hq~ 311 (391)
T PLN03169 308 VHPG 311 (391)
T ss_pred ecCC
Confidence 7743
No 112
>PLN03173 chalcone synthase; Provisional
Probab=99.45 E-value=2.7e-12 Score=113.66 Aligned_cols=193 Identities=13% Similarity=0.061 Sum_probs=123.3
Q ss_pred CHHHHhhcChHHHHHHHHHHHHHHHCCCCCCCCCCCCeEEEEccCCCCccccccCccccchhhHhhhhhhhHHHHHHHHc
Q psy4744 41 HSRLANVLDPLVRCFIEPCFEAILDAGINPKSLAGSNSSVYTNSCISDDESLGCDERLTTNFWLLAHVRCLLANRIAYLF 120 (270)
Q Consensus 41 ~~~~~~~~~~~~~l~l~a~~~Al~dAg~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~ 120 (270)
..+......-...|+.+|+++||+++|+++++|+ .+++.++.+.. ....+.++...|
T Consensus 92 ~~r~~~~~~~a~~La~~Aa~~AL~~ag~~~~dId----~li~~t~t~~~-------------------~P~~a~~l~~~L 148 (391)
T PLN03173 92 DARQDMVVVEVPKLGKEAAAKAIKEWGQPKSKIT----HLVFCTTSGVD-------------------MPGADYQLTKLL 148 (391)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCC----EEEEEccCCCc-------------------ccHHHHHHHHHh
Confidence 3444444455669999999999999999988887 56666554321 124677899999
Q ss_pred CCCCC---CccccccchhHHHHHHHHHHHHhcCCCCEEEEeeeccccCchhHHhhhcCcccCCCCCCcccCCCCCceeec
Q psy4744 121 DLKGP---SFTIDNSWTGGIEVLRQAVQDISEGRVDTAIVGVSNLLLNANLNSLFQGLNRLSPDGKTRSFDHLANGYARS 197 (270)
Q Consensus 121 gl~Gp---~~~v~~~cas~~~al~~A~~~i~~G~~d~~lv~g~~~~~~~~~~~~~~~~~~ls~~~~~~pfd~~~~g~~~g 197 (270)
|++.- .+.++.+|++++.+|..|.++++++....|||+++|...... . .++. +..+..-...++|
T Consensus 149 Gl~~~~~~~~~~~~gC~g~~~aL~~A~~~~~~~~~~~vLVV~~E~~S~~~--~--------~~~d--~~~~~~v~~~LFG 216 (391)
T PLN03173 149 GLRSSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTF--R--------GPSD--THLDSLVGQALFG 216 (391)
T ss_pred CCCccceeeehhcCccHHHHHHHHHHHHHHHhCCCCeEEEEEEehhhhhh--C--------Cccc--cchhhhhhhhhhc
Confidence 99753 356899999999999999999999999999999999832100 0 0000 0000012346799
Q ss_pred CeeEEEEecChHHHH-hhcCce-EeEE----EeccCC-----CCCCC------cCCC--HHHHHHHHHHHHHHcCCCCCC
Q psy4744 198 EGIVVLLLQRSETAL-RSYGEV-LHAE----SRFYGS-----LERPF------VGFN--QASLVEFFTNFYQKARVNPGQ 258 (270)
Q Consensus 198 eGA~alvL~~~~~A~-~~~g~~-~~~~----~~~~~~-----~~~~~------~~~~--~~~~~~a~~~al~~agi~~~d 258 (270)
|||+|+||+..+... ..+... .... ...++. ...++ ..|. ...+...+++.|++.|++++|
T Consensus 217 DGAaAvvl~~~~~~~~~~~~~~l~~~~~~~~~~t~~~~~~~i~~~G~~~~l~~~vp~~~~~~~~~~i~~~L~~~gl~~~d 296 (391)
T PLN03173 217 DGAAAIIIGSDPVLGVEKPLFELVSAAQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNVEKSLTEAFKPLGISDWN 296 (391)
T ss_pred CceEEEEEeCCCCCCcCCcceEEEeeeeEEecCCccceeeEEEcCceEEEEecHHHHHHHHHHHHHHHHHHHhcCCCccc
Confidence 999999998643210 000000 1000 000000 00110 0111 134577889999999999999
Q ss_pred ccEEEcccCC
Q psy4744 259 VDFLEADGSA 268 (270)
Q Consensus 259 id~v~~hgtg 268 (270)
||++-+|=-|
T Consensus 297 i~~~v~Hqgg 306 (391)
T PLN03173 297 SLFWIAHPGG 306 (391)
T ss_pred cCeEEECCCc
Confidence 9999999644
No 113
>PLN03168 chalcone synthase; Provisional
Probab=99.43 E-value=5.7e-12 Score=111.67 Aligned_cols=193 Identities=16% Similarity=0.131 Sum_probs=124.1
Q ss_pred CCHHHHhhcChHHHHHHHHHHHHHHHCCCCCCCCCCCCeEEEEccCCCCccccccCccccchhhHhhhhhhhHHHHHHHH
Q psy4744 40 LHSRLANVLDPLVRCFIEPCFEAILDAGINPKSLAGSNSSVYTNSCISDDESLGCDERLTTNFWLLAHVRCLLANRIAYL 119 (270)
Q Consensus 40 ~~~~~~~~~~~~~~l~l~a~~~Al~dAg~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~ 119 (270)
+..+......-...|+.+|+++||+++|+++++|+ .+++.++.+.. ...++.+|+..
T Consensus 90 ~~~r~~~~~~~a~~La~~Aa~~AL~~ag~~~~dId----~lI~~T~Tg~~-------------------~Ps~a~~l~~~ 146 (389)
T PLN03168 90 LNVRHDIVVVQVPKLAAEAAQKAIKEWGGRKSDIT----HIVFATTSGVN-------------------MPGADHALAKL 146 (389)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCC----EEEEECCCCCC-------------------CccHHHHHHHH
Confidence 34444444556679999999999999999998887 67777765522 12467789999
Q ss_pred cCCCCC---CccccccchhHHHHHHHHHHHHhcCCCCEEEEeeeccccCchhHHhhhcCcccCCCCCCcccCCCCCceee
Q psy4744 120 FDLKGP---SFTIDNSWTGGIEVLRQAVQDISEGRVDTAIVGVSNLLLNANLNSLFQGLNRLSPDGKTRSFDHLANGYAR 196 (270)
Q Consensus 120 ~gl~Gp---~~~v~~~cas~~~al~~A~~~i~~G~~d~~lv~g~~~~~~~~~~~~~~~~~~ls~~~~~~pfd~~~~g~~~ 196 (270)
||++.- ++.++.+|++++.+|..|..+|++|....|||+++|.... .+.. ++. ...+..-...++
T Consensus 147 LGl~~~~~r~~d~~~gC~g~~~aL~~A~~~i~~~~~~~VLVV~~E~~S~-----~~~~-----~~~--~~~~~~~~~~LF 214 (389)
T PLN03168 147 LGLKPTVKRVMMYQTGCFGGASVLRVAKDLAENNKGARVLAVASEVTAV-----TYRA-----PSE--NHLDGLVGSALF 214 (389)
T ss_pred hCcCCcceeeeeeCCccHHHHHHHHHHHHHHHhCCCCEEEEEEEehhhh-----hccC-----ccc--ccHHHHhccccc
Confidence 999752 5789999999999999999999999999999999998322 1100 000 001111245689
Q ss_pred cCeeEEEEecChHHHH-hhcCc-eEe-E-E--Ee-ccCCC-----CCCC--c-CCC-----HHHHHHHHHHHHHHcCCCC
Q psy4744 197 SEGIVVLLLQRSETAL-RSYGE-VLH-A-E--SR-FYGSL-----ERPF--V-GFN-----QASLVEFFTNFYQKARVNP 256 (270)
Q Consensus 197 geGA~alvL~~~~~A~-~~~g~-~~~-~-~--~~-~~~~~-----~~~~--~-~~~-----~~~~~~a~~~al~~agi~~ 256 (270)
||||+|+||+..+... .. +. ... . . +- ..+.. ..++ . ... ...+...++++|+..|+..
T Consensus 215 GDGAaAvvl~~~~~~~~~~-~~~~~~~~~~~~~p~s~~~~~~~~~~~g~~~~l~~~vp~~i~~~~~~~l~~~l~~~~~~~ 293 (389)
T PLN03168 215 GDGAGVYVVGSDPKPEVEK-ALFEVHWAGETILPESDGAIDGHLTEAGLIFHLMKDVPGLISKNIEKFLNEARKCVGSPD 293 (389)
T ss_pred cCccEEEEEecCCCCccCC-cceEEEeeeeEEEcCCCCccCceEecCceEEEECHHHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 9999999998743211 11 10 000 0 0 00 10100 0011 0 011 1234667778888888887
Q ss_pred CCccEEEcccCC
Q psy4744 257 GQVDFLEADGSA 268 (270)
Q Consensus 257 ~did~v~~hgtg 268 (270)
.|++++-+|=-|
T Consensus 294 ~d~~~~v~Hqgg 305 (389)
T PLN03168 294 WNEMFWAVHPGG 305 (389)
T ss_pred cccceEEecCCc
Confidence 888888888543
No 114
>TIGR01835 HMG-CoA-S_prok 3-hydroxy-3-methylglutaryl CoA synthase, prokaryotic clade. This clade of hydroxymethylglutaryl-CoA (HMG-CoA) synthases is found in a limited spectrum of mostly gram-positive bacteria which make isopentenyl pyrophosphate (IPP) via the mevalonate pathway. This pathway is found primarily in eukaryotes and archaea, but the bacterial homologs are distinct, having aparrently diverged after being laterally transferred from an early eukaryote. HMG-CoA synthase is the first step in the pathway and joins acetyl-CoA with acetoacetyl-CoA with the release of one molecule of CoA. The Borellia sequence may have resulted from a separate lateral transfer event.
Probab=99.37 E-value=1.4e-11 Score=109.19 Aligned_cols=169 Identities=9% Similarity=0.043 Sum_probs=114.7
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCeEEEEccCCCCccccccCccccchhhHhhhhhhhHHHHHHHHcCCCC--CCcc
Q psy4744 51 LVRCFIEPCFEAILDAGINPKSLAGSNSSVYTNSCISDDESLGCDERLTTNFWLLAHVRCLLANRIAYLFDLKG--PSFT 128 (270)
Q Consensus 51 ~~~l~l~a~~~Al~dAg~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl~G--p~~~ 128 (270)
...|+++|+++||+++ ++++|+ .+++++..+.+. ....+..|...||+.+ +++.
T Consensus 49 ~~~la~~Aa~~aL~~a--~~~~Id----~li~~t~s~~~~------------------~~s~a~~v~~~Lgl~~~~~~~d 104 (379)
T TIGR01835 49 IVTMAASAAKPILDRN--DKQKID----MVIFGTESGIDQ------------------SKAAAVYVHGLLGLQPFCRSFE 104 (379)
T ss_pred HHHHHHHHHHHHHHhC--CHhhCC----EEEEEeCCCCCC------------------CCCHHHHHHHHhCCCCCceEEE
Confidence 3589999999999998 566665 677777665532 1246778999999964 6788
Q ss_pred ccccchhHHHHHHHHHHHHhcCCCCEEEEeeeccccCchhHHhhhcCcccCCCCCCcccCCCCCceeecCeeEEEEecCh
Q psy4744 129 IDNSWTGGIEVLRQAVQDISEGRVDTAIVGVSNLLLNANLNSLFQGLNRLSPDGKTRSFDHLANGYARSEGIVVLLLQRS 208 (270)
Q Consensus 129 v~~~cas~~~al~~A~~~i~~G~~d~~lv~g~~~~~~~~~~~~~~~~~~ls~~~~~~pfd~~~~g~~~geGA~alvL~~~ 208 (270)
+..+|+++..||..|..+|++|..+.+||+++|..... . ....-..+||||+|+||++.
T Consensus 105 v~~aC~gg~~aL~~A~~~i~s~~~~~aLVv~~D~a~~~-------------~--------~~~~~~~~GdGA~A~Ll~~~ 163 (379)
T TIGR01835 105 LKQACYGATAALQMAKGHVALSPDRKVLVIASDIAKYG-------------L--------ESPGEPTQGAGAVAMLVSAD 163 (379)
T ss_pred eccccHHHHHHHHHHHHHHHcCCCCeEEEEEeehhhcc-------------c--------CCCCCccccCccEEEEEecC
Confidence 99999999999999999999999999999999871110 0 00112358999999999864
Q ss_pred HHHHhhcCceEeEEEeccCCC---C-CCCcCC--C--------HHHHHHHHHHHHHHcCCCCCCccEEEcccC
Q psy4744 209 ETALRSYGEVLHAESRFYGSL---E-RPFVGF--N--------QASLVEFFTNFYQKARVNPGQVDFLEADGS 267 (270)
Q Consensus 209 ~~A~~~~g~~~~~~~~~~~~~---~-~~~~~~--~--------~~~~~~a~~~al~~agi~~~did~v~~hgt 267 (270)
.. ................ . .....| + .....+++++.|+++|++++|||++-.|-+
T Consensus 164 ~~---i~~~~~~~~~~t~~~~df~~p~~~~~~~v~g~~s~~~y~~~~~~~~~~~l~~~g~~~~did~~i~H~p 233 (379)
T TIGR01835 164 PK---LLAINEDSVLYTDDIMDFWRPNYSTTALVDGQYSNEQYLNAFENAWNDYAKRTGLSLADFAAFCFHVP 233 (379)
T ss_pred CC---eeEEeccceeeecCCCCccCCCCCCceeECcHHHHHHHHHHHHHHHHHHHHHhCCCHHHcCEEEECCC
Confidence 21 1000000000000000 0 000111 1 123568889999999999999999999964
No 115
>KOG1389|consensus
Probab=99.33 E-value=5.6e-12 Score=104.16 Aligned_cols=188 Identities=14% Similarity=0.188 Sum_probs=128.9
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCCCeEEEEccCCCCccccccCccccchhhHhhhhhhhHHHHHHHHc-CC--CCCCccc
Q psy4744 53 RCFIEPCFEAILDAGINPKSLAGSNSSVYTNSCISDDESLGCDERLTTNFWLLAHVRCLLANRIAYLF-DL--KGPSFTI 129 (270)
Q Consensus 53 ~l~l~a~~~Al~dAg~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~-gl--~Gp~~~v 129 (270)
.|...+.+..+++.++++..+....+|.+++...+ ....|++.++ |+ +-|..+|
T Consensus 63 eLl~~vl~a~ie~t~~dp~~igdi~vG~vL~pg~g-----------------------a~e~R~a~~~ag~P~tvpv~tv 119 (435)
T KOG1389|consen 63 ELLAAVLRAVIEKTNLDPSLIGDIVVGTVLAPGSG-----------------------ASECRMAAFYAGFPETVPVRTV 119 (435)
T ss_pred HHHHHHHHHHHhhcCCCHHHhcceeeeeccCCCcc-----------------------hHHHHHHHHHcCCCcccchhhh
Confidence 45566778888999999988876555665554322 2344555443 55 4588899
Q ss_pred cccchhHHHHHHHHHHHHhcCCCCEEEEeeeccccCchh-----------------HHhhhcCcccC-------------
Q psy4744 130 DNSWTGGIEVLRQAVQDISEGRVDTAIVGVSNLLLNANL-----------------NSLFQGLNRLS------------- 179 (270)
Q Consensus 130 ~~~cas~~~al~~A~~~i~~G~~d~~lv~g~~~~~~~~~-----------------~~~~~~~~~ls------------- 179 (270)
+..|+||++|+..-+..|++|.+|.-|.+|+|.|.+.+. -.++-.+|..|
T Consensus 120 NRqCsSGLqaVadiA~~Ir~G~ydIGla~GvESMt~~~~~g~~g~~~~~~~~~~~A~dCllpmGitsEnva~rfgvsR~e 199 (435)
T KOG1389|consen 120 NRQCSSGLQAVADIAAKIRAGFYDIGLAAGVESMTTNYPRGWPGSINPRLQKFEKARDCLLPMGITSENVAERFGVSREE 199 (435)
T ss_pred hhhhhhHHHHHHHHHHHHhcCceeeecccchhhhcccCCCCCccccChhhhhhhHHhhcccccccchHHHHHHhCCChhh
Confidence 999999999999999999999999999999998765421 00111222221
Q ss_pred ----------------------------------C-----------CCCCcc-------------cCCCC-----Cceee
Q psy4744 180 ----------------------------------P-----------DGKTRS-------------FDHLA-----NGYAR 196 (270)
Q Consensus 180 ----------------------------------~-----------~~~~~p-------------fd~~~-----~g~~~ 196 (270)
+ ++..|| |-+|. +..-+
T Consensus 200 qD~~Av~S~kkAa~A~~~G~f~dEIiPv~tkv~D~~g~~k~i~v~~DeGiRp~ttl~~l~klkpvFkkdGttTagNsSQv 279 (435)
T KOG1389|consen 200 QDEAAVDSHKKAAAATAKGKFKDEIIPVKTKVVDPKGDEKPITVSVDEGIRPNTTLESLAKLKPVFKKDGTTTAGNSSQV 279 (435)
T ss_pred hhHHHHHHHHHHHHHhhcCcchhheeeeeeeccCCcCCccceeEecCCCCCCCcchhHHhhcchhhhcCCccccCchhhc
Confidence 1 112222 22221 11137
Q ss_pred cCeeEEEEecChHHHHhhcCceEeEEEeccCCCCCCCcCCCHHHHHHHHHHHHHHcCCCCCCccEEEcc
Q psy4744 197 SEGIVVLLLQRSETALRSYGEVLHAESRFYGSLERPFVGFNQASLVEFFTNFYQKARVNPGQVDFLEAD 265 (270)
Q Consensus 197 geGA~alvL~~~~~A~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~agi~~~did~v~~h 265 (270)
+|||++++|.++..|-+. |.++.+.+..+..-... +....-+...+|..+|+.+|+..+|||++|.+
T Consensus 280 SDGa~aVLLmkRs~A~ql-gLPvlgvfr~f~~vGv~-P~iMGiGPavAIp~alk~aGL~v~did~FEIN 346 (435)
T KOG1389|consen 280 SDGAGAVLLMKRSVAMQL-GLPVLGVFRDFAAVGVP-PAIMGIGPAVAIPKALKAAGLEVDDIDLFEIN 346 (435)
T ss_pred ccchhhhhhhhhhhHhhc-CCceeEEeeeeeeecCC-HHHcCCCchhhhHHHHHHcCCcccccceeehh
Confidence 999999999999999887 88888887776642111 11112345789999999999999999999975
No 116
>PLN02854 3-ketoacyl-CoA synthase
Probab=99.32 E-value=7.2e-11 Score=106.82 Aligned_cols=143 Identities=15% Similarity=0.149 Sum_probs=99.4
Q ss_pred CCCCCCCCCCcccCCCCHHH--HhhcChHHHHHHHHHHHHHHHCCCCCCCCCCCCeEEEEccCCCCccccccCccccchh
Q psy4744 25 SKLQTITKFDQTFFSLHSRL--ANVLDPLVRCFIEPCFEAILDAGINPKSLAGSNSSVYTNSCISDDESLGCDERLTTNF 102 (270)
Q Consensus 25 ~~~~~~~~fd~~~~~~~~~~--~~~~~~~~~l~l~a~~~Al~dAg~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~ 102 (270)
+.+++-+.+.+..+.++++. .............++.++|+++|+++++|+ -+|+. +.+.+.
T Consensus 160 sg~g~~ty~P~~~~~~~~~~~~~~~r~ea~~v~~~~~~~lL~kaGi~p~dID----~LIv~-cS~~~p------------ 222 (521)
T PLN02854 160 SGLGDETYLPRGITSRPPNLCMEEARAEAEAVMFGALDSLFSKTGVKPRDIG----ILIVN-CSLFNP------------ 222 (521)
T ss_pred cCCCCccccCccccCCCCcchHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCC----EEEEE-CCCCCC------------
Confidence 34444444455544455432 222233556777889999999999998886 45554 333321
Q ss_pred hHhhhhhhhHHHHHHHHcCCCC--CCcccc-ccchhHHHHHHHHHHHHhcCCCCEEEEeeeccccCchhHHhhhcCcccC
Q psy4744 103 WLLAHVRCLLANRIAYLFDLKG--PSFTID-NSWTGGIEVLRQAVQDISEGRVDTAIVGVSNLLLNANLNSLFQGLNRLS 179 (270)
Q Consensus 103 ~~~~~~~~~~a~~ia~~~gl~G--p~~~v~-~~cas~~~al~~A~~~i~~G~~d~~lv~g~~~~~~~~~~~~~~~~~~ls 179 (270)
...++..|...||++. .++.++ .+|++++.+|..|.++|++|....+||+++|... .. ++
T Consensus 223 ------~PSlAa~I~n~LGlr~~i~afdLsgmGCSggl~aL~lA~~lL~~~~~~~aLVVstE~~S-~~-~y--------- 285 (521)
T PLN02854 223 ------TPSLSAMIVNHYKLRTDIKSYNLGGMGCSAGLISIDLANDLLKANPNSYAVVVSTENIT-LN-WY--------- 285 (521)
T ss_pred ------CCCHHHHHHHHhCCCCCceEEecccchhhhHHHHHHHHHHHHHhCCCCeEEEEEEeeee-cC-CC---------
Confidence 2356788999999973 567788 7999999999999999999999999999999843 11 00
Q ss_pred CCCCCcccCCCCC----ceeecCeeEEEEecCh
Q psy4744 180 PDGKTRSFDHLAN----GYARSEGIVVLLLQRS 208 (270)
Q Consensus 180 ~~~~~~pfd~~~~----g~~~geGA~alvL~~~ 208 (270)
+..+++ ..++||||+|+||++.
T Consensus 286 -------~g~Drs~lv~~~LFgDGAAAvlLs~~ 311 (521)
T PLN02854 286 -------FGNDRSMLLCNCIFRMGGAAVLLSNK 311 (521)
T ss_pred -------CCCchhhhcceeeeccceeEEEEecc
Confidence 011222 4689999999999874
No 117
>PLN02577 hydroxymethylglutaryl-CoA synthase
Probab=99.27 E-value=1e-10 Score=104.91 Aligned_cols=168 Identities=15% Similarity=0.136 Sum_probs=111.8
Q ss_pred hHHHHHHHHHHHHHHHCCCCCCCCCCCCeEEEEccCCCCccccccCccccchhhHhhhhhhhHHHHHH---HHcCCCC-C
Q psy4744 50 PLVRCFIEPCFEAILDAGINPKSLAGSNSSVYTNSCISDDESLGCDERLTTNFWLLAHVRCLLANRIA---YLFDLKG-P 125 (270)
Q Consensus 50 ~~~~l~l~a~~~Al~dAg~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia---~~~gl~G-p 125 (270)
....|++.|+++||+++|+++++|+ -|++++..+.+.. ...+..|. ..+|.+. +
T Consensus 52 d~~tmA~~AA~~aL~~agid~~~Id----llivaTeT~~d~~------------------ps~A~~v~~ll~~LG~~~~~ 109 (459)
T PLN02577 52 DVISMSLTVVKSLLEKYNIDPKQIG----RLEVGSETVIDKS------------------KSIKTFLMQLFEESGNTDIE 109 (459)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCC----EEEEEcCCCCCCC------------------CchHHHHHHHHHHhCCCCcE
Confidence 4568999999999999999998887 6888887765431 23444443 4556643 6
Q ss_pred CccccccchhHHHHHHHHHHHHhcCCC--CEEEEeeeccccCchhHHhhhcCcccCCCCCCcccCCCCCceeecCeeEEE
Q psy4744 126 SFTIDNSWTGGIEVLRQAVQDISEGRV--DTAIVGVSNLLLNANLNSLFQGLNRLSPDGKTRSFDHLANGYARSEGIVVL 203 (270)
Q Consensus 126 ~~~v~~~cas~~~al~~A~~~i~~G~~--d~~lv~g~~~~~~~~~~~~~~~~~~ls~~~~~~pfd~~~~g~~~geGA~al 203 (270)
++.++.+|.++..||..|..+|++|.. +.+||+++|....... +. +| ..|+||+|+
T Consensus 110 afDi~~AC~G~~~AL~~A~~~i~sg~~~~~~aLVV~aD~a~~~~~-----------~~---e~--------t~GdGA~A~ 167 (459)
T PLN02577 110 GVDSTNACYGGTAALLNCVNWVESSSWDGRYGLVVAADSAVYAEG-----------PA---RP--------TGGAGAVAM 167 (459)
T ss_pred EeehhhhhHHHHHHHHHHHHHHHcCCCCCCeEEEEEechhhccCC-----------CC---CC--------CCCcceEEE
Confidence 788999999999999999999999985 9999999998221110 00 11 239999999
Q ss_pred EecChHHHHhhcCceEeEEEeccCCC-CCCCcC-------C--C--------HHHHHHHHHHHHHHc------CCCCCCc
Q psy4744 204 LLQRSETALRSYGEVLHAESRFYGSL-ERPFVG-------F--N--------QASLVEFFTNFYQKA------RVNPGQV 259 (270)
Q Consensus 204 vL~~~~~A~~~~g~~~~~~~~~~~~~-~~~~~~-------~--~--------~~~~~~a~~~al~~a------gi~~~di 259 (270)
||+..+ . . .+.....+.+.. ...+.. | + ...+..++++.+++. |++++|+
T Consensus 168 lv~~~~----~-~-~l~~~~~g~~~~~~~Df~rP~~~~~~~~vdG~~s~~~yl~~~~~~~~~~~~k~~~~~~~g~~~~d~ 241 (459)
T PLN02577 168 LVGPNA----P-I-VFESKYRGSHMAHVYDFYKPDLASEYPVVDGKLSQTCYLMALDSCYKRFCEKYEKLEGKQFSISDA 241 (459)
T ss_pred EEccCC----C-c-eeecccccccCcccchhcccCCCCCceEEcchHHHHHHHHHHHHHHHHHHHHhhcccccCCCHHHc
Confidence 998632 1 1 121122222221 011111 1 1 122455566666666 8899999
Q ss_pred cEEEcccC
Q psy4744 260 DFLEADGS 267 (270)
Q Consensus 260 d~v~~hgt 267 (270)
||+-.|-.
T Consensus 242 d~~vfHqP 249 (459)
T PLN02577 242 DYFVFHAP 249 (459)
T ss_pred CEEEecCC
Confidence 99999964
No 118
>PLN02932 3-ketoacyl-CoA synthase
Probab=99.22 E-value=1.4e-10 Score=104.21 Aligned_cols=124 Identities=15% Similarity=0.147 Sum_probs=93.6
Q ss_pred ChHHHHHHHHHHHHHHHCCCCCCCCCCCCeEEEEccCCCCccccccCccccchhhHhhhhhhhHHHHHHHHcCCCC--CC
Q psy4744 49 DPLVRCFIEPCFEAILDAGINPKSLAGSNSSVYTNSCISDDESLGCDERLTTNFWLLAHVRCLLANRIAYLFDLKG--PS 126 (270)
Q Consensus 49 ~~~~~l~l~a~~~Al~dAg~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl~G--p~ 126 (270)
.....++..|+++||+++|+++++|+ .+|+.++.+. . ...++..|...||++. .+
T Consensus 146 ~ea~~la~~Aa~~aL~~agi~p~dId----~lIv~tst~~-~------------------~Pslaa~V~~~lGlr~~i~~ 202 (478)
T PLN02932 146 KETEEVIIGAVDNLFRNTGISPSDIG----ILVVNSSTFN-P------------------TPSLSSILVNKFKLRDNIKS 202 (478)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCC----EEEEEccCCC-C------------------CCcHHHHHHHHhCCCCCceE
Confidence 34668999999999999999998887 5666665432 1 2356788999999963 67
Q ss_pred cccc-ccchhHHHHHHHHHHHHhcCCCCEEEEeeeccccCchhHHhhhcCcccCCCCCCcccCCCCCceeecCeeEEEEe
Q psy4744 127 FTID-NSWTGGIEVLRQAVQDISEGRVDTAIVGVSNLLLNANLNSLFQGLNRLSPDGKTRSFDHLANGYARSEGIVVLLL 205 (270)
Q Consensus 127 ~~v~-~~cas~~~al~~A~~~i~~G~~d~~lv~g~~~~~~~~~~~~~~~~~~ls~~~~~~pfd~~~~g~~~geGA~alvL 205 (270)
+.++ .+|++++.+|..|.++|+++....+||+++|....-. ... + .-+..-...++||||+|+||
T Consensus 203 fdL~gmGCSggl~aL~lA~~ll~~~~~~~aLVVstE~~S~~~-~~~---------d----~r~~l~t~~LFgDGAAAvlL 268 (478)
T PLN02932 203 LNLGGMGCSAGVIAIDAAKSLLQVHRNTYALVVSTENITQNL-YLG---------N----NKSMLVTNCLFRIGGAAILL 268 (478)
T ss_pred EEeccchhhhHHHHHHHHHHHHHcCCCCeEEEEEEeeccccc-CCC---------c----chhhhccceeecccceEEEE
Confidence 8899 8999999999999999999999999999999832221 110 0 00001135679999999999
Q ss_pred cChH
Q psy4744 206 QRSE 209 (270)
Q Consensus 206 ~~~~ 209 (270)
++.+
T Consensus 269 s~~~ 272 (478)
T PLN02932 269 SNRS 272 (478)
T ss_pred eccc
Confidence 9754
No 119
>PF00108 Thiolase_N: Thiolase, N-terminal domain; InterPro: IPR020616 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2.3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 1PXT_B 1AFW_B 1WL4_A 1WL5_A 4E1L_B 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2WUA_B ....
Probab=99.18 E-value=6.4e-11 Score=99.76 Aligned_cols=98 Identities=19% Similarity=0.292 Sum_probs=76.2
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCeEEEEccCCCCccccccCccccchhhHhhhhhhhHHHHHHHHcCCC--CCCcc
Q psy4744 51 LVRCFIEPCFEAILDAGINPKSLAGSNSSVYTNSCISDDESLGCDERLTTNFWLLAHVRCLLANRIAYLFDLK--GPSFT 128 (270)
Q Consensus 51 ~~~l~l~a~~~Al~dAg~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl~--Gp~~~ 128 (270)
...|+.++++++|+++++++++|+ .|++|+...... ...++..++...|+. -|.++
T Consensus 26 ~~~L~~~a~~~al~~~~i~~~~Id----~v~~G~~~~~~~------------------g~~~ar~~~l~aGl~~~vp~~~ 83 (264)
T PF00108_consen 26 PEDLAAEAVKAALERAGIDPEDID----AVIVGNVLQEGE------------------GQNIARQAALAAGLPESVPATT 83 (264)
T ss_dssp HHHHHHHHHHHHHHHHTSHGGGEE----EEEEE-SSSCTT------------------TCHHHHHHHHHTTS-TTSEEEE
T ss_pred HHHHHHHHHHHHHHhcccchhhhh----hcCccccccccc------------------chhhhhhhhhhcccccccceee
Confidence 457899999999999999998888 678877654321 123455666777773 48999
Q ss_pred ccccchhHHHHHHHHHHHHhcCCCCEEEEeeeccccCchhHH
Q psy4744 129 IDNSWTGGIEVLRQAVQDISEGRVDTAIVGVSNLLLNANLNS 170 (270)
Q Consensus 129 v~~~cas~~~al~~A~~~i~~G~~d~~lv~g~~~~~~~~~~~ 170 (270)
|+.+|+||+.||..|++.|++|+.|++|++|+|.+.......
T Consensus 84 V~~~CaSG~~Av~~a~~~I~sG~~dvvlagGvE~mS~~p~~~ 125 (264)
T PF00108_consen 84 VNRACASGLQAVHLAAMAIASGEADVVLAGGVESMSRVPMGL 125 (264)
T ss_dssp EE-GGGHHHHHHHHHHHHHHTTS-SEEEEEEEEETTTSCEEE
T ss_pred ehhhhhHHHHHHHHhhhhhcCCCccEEEEecccccccccccc
Confidence 999999999999999999999999999999999976654433
No 120
>PLN02377 3-ketoacyl-CoA synthase
Probab=99.14 E-value=5.3e-10 Score=101.15 Aligned_cols=119 Identities=16% Similarity=0.202 Sum_probs=91.2
Q ss_pred ChHHHHHHHHHHHHHHHCCCCCCCCCCCCeEEEEccCCCCccccccCccccchhhHhhhhhhhHHHHHHHHcCCCC--CC
Q psy4744 49 DPLVRCFIEPCFEAILDAGINPKSLAGSNSSVYTNSCISDDESLGCDERLTTNFWLLAHVRCLLANRIAYLFDLKG--PS 126 (270)
Q Consensus 49 ~~~~~l~l~a~~~Al~dAg~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl~G--p~ 126 (270)
.....++..|+.+||+++|+++++|+ -+++ ++.+.+. ...++..|...||++. .+
T Consensus 170 ~ea~~l~~~A~~~aL~kaGi~p~dID----~LVv-~cS~~~~------------------~PSlaa~V~~~LGlr~~v~a 226 (502)
T PLN02377 170 EEAEQVMFGALDNLFANTNVNPKDIG----ILVV-NCSLFNP------------------TPSLSAMIVNKYKLRGNIRS 226 (502)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCC----EEEE-ECCCCCC------------------CCcHHHHHHHHhCCCCCCeE
Confidence 34668999999999999999998887 3444 4433321 2356788999999974 67
Q ss_pred cccc-ccchhHHHHHHHHHHHHhcCCCCEEEEeeeccccCchhHHhhhcCcccCCCCCCcccCCCCC----ceeecCeeE
Q psy4744 127 FTID-NSWTGGIEVLRQAVQDISEGRVDTAIVGVSNLLLNANLNSLFQGLNRLSPDGKTRSFDHLAN----GYARSEGIV 201 (270)
Q Consensus 127 ~~v~-~~cas~~~al~~A~~~i~~G~~d~~lv~g~~~~~~~~~~~~~~~~~~ls~~~~~~pfd~~~~----g~~~geGA~ 201 (270)
+.++ .+|++++.+|..|.++|+++....|||+++|...... .++.++. ..+++|||+
T Consensus 227 fdL~gmGCsggl~aL~lA~~ll~~~~~~~aLVVstE~~S~~~------------------~~~d~~s~lv~n~LFgDGAa 288 (502)
T PLN02377 227 FNLGGMGCSAGVIAVDLAKDMLQVHRNTYAVVVSTENITQNW------------------YFGNKKSMLIPNCLFRVGGS 288 (502)
T ss_pred EecccchhhHHHHHHHHHHHHHHcCCCCEEEEEEEecccccc------------------CCCCCccccccceeeccccE
Confidence 8899 6999999999999999999999999999999833211 0111222 367899999
Q ss_pred EEEecCh
Q psy4744 202 VLLLQRS 208 (270)
Q Consensus 202 alvL~~~ 208 (270)
|+||++.
T Consensus 289 AvlLs~~ 295 (502)
T PLN02377 289 AVLLSNK 295 (502)
T ss_pred EEEEecc
Confidence 9999873
No 121
>COG3425 PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipid metabolism]
Probab=99.14 E-value=7.4e-10 Score=95.34 Aligned_cols=167 Identities=19% Similarity=0.196 Sum_probs=117.4
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCeEEEEccCCCCccccccCccccchhhHhhhhhhhHHHHHHHHcCCCCCC--cc
Q psy4744 51 LVRCFIEPCFEAILDAGINPKSLAGSNSSVYTNSCISDDESLGCDERLTTNFWLLAHVRCLLANRIAYLFDLKGPS--FT 128 (270)
Q Consensus 51 ~~~l~l~a~~~Al~dAg~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl~Gp~--~~ 128 (270)
..-|+++|++++|+++++++.+|. .|++|+..+.+.. -..+..|+..||++.-. +-
T Consensus 51 ~vTmaveAA~~~l~r~~~D~~~Ig----~v~vgTES~~d~~------------------K~~at~v~~~lg~~~~~~~~d 108 (377)
T COG3425 51 AVTMAVEAARNALKRADIDPSKIG----AVIVGSESGPDAV------------------KPTATIVAEALGLNPSARAAD 108 (377)
T ss_pred HHHHHHHHHHHHHhccCCCHHHCc----eEEEecCCCcccc------------------cchHHHHHHHhCCCCceehhh
Confidence 456999999999999999887776 6888888766642 23577788999996433 34
Q ss_pred ccccchhHHHHHHHHHHHHhcCCCCEEEEeeeccccCchhHHhhhcCcccCCCCCCcccCCCCCceeecCeeEEEEecCh
Q psy4744 129 IDNSWTGGIEVLRQAVQDISEGRVDTAIVGVSNLLLNANLNSLFQGLNRLSPDGKTRSFDHLANGYARSEGIVVLLLQRS 208 (270)
Q Consensus 129 v~~~cas~~~al~~A~~~i~~G~~d~~lv~g~~~~~~~~~~~~~~~~~~ls~~~~~~pfd~~~~g~~~geGA~alvL~~~ 208 (270)
+..+|-+|..||..|..+|.+|..+.+||+|+|....... ..+. ...|.|++|+|+..-
T Consensus 109 ~~~AC~agT~aL~~a~~~v~s~~~~~~LvI~sD~a~~~~~-------~~~E--------------~t~GAGavA~lIg~n 167 (377)
T COG3425 109 VEFACYAGTAALQAAIGWVESGMISYGLVIGADTAQYAPG-------DALE--------------YTAGAGAVAFLIGKN 167 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCccceEEEeehhhccCCC-------cccC--------------ccCCCceEEEEEccC
Confidence 8889999999999999999999999999999998221110 0111 135999999999863
Q ss_pred HHHHhhcCceEeEEEeccCC---CCCCC------cCCC----------HHHHHHHHHHHHHHcCCCCCCccEEEcccCC
Q psy4744 209 ETALRSYGEVLHAESRFYGS---LERPF------VGFN----------QASLVEFFTNFYQKARVNPGQVDFLEADGSA 268 (270)
Q Consensus 209 ~~A~~~~g~~~~~~~~~~~~---~~~~~------~~~~----------~~~~~~a~~~al~~agi~~~did~v~~hgtg 268 (270)
+.. .+.....++ ....+ ..|. ...+..+.+..+++.|++|+|+||+-.|-+=
T Consensus 168 ~~~--------~a~~~~~~syt~d~~DFwRp~~~~yp~~dg~~s~~~Y~~~~~~a~~~~~~k~gls~~dfdy~vfH~P~ 238 (377)
T COG3425 168 PPI--------VAEFEGTGSYTTDTPDFWRPDGQPYPYVDGRFSEPAYFKHVENAAKGYMEKTGLSPDDFDYIVFHQPN 238 (377)
T ss_pred CCe--------EEEecCceEEecCCCcccccCCCcccccCceecHHHHHHHHHHHHHHHHHHhCCChhhhCeEEecCCC
Confidence 211 111111111 00111 1121 1345778888899999999999999999753
No 122
>PLN02192 3-ketoacyl-CoA synthase
Probab=99.10 E-value=4.7e-10 Score=101.38 Aligned_cols=143 Identities=14% Similarity=0.123 Sum_probs=98.8
Q ss_pred CCCCCCCCCCcccCCCCHHH--HhhcChHHHHHHHHHHHHHHHCCCCCCCCCCCCeEEEEccCCCCccccccCccccchh
Q psy4744 25 SKLQTITKFDQTFFSLHSRL--ANVLDPLVRCFIEPCFEAILDAGINPKSLAGSNSSVYTNSCISDDESLGCDERLTTNF 102 (270)
Q Consensus 25 ~~~~~~~~fd~~~~~~~~~~--~~~~~~~~~l~l~a~~~Al~dAg~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~ 102 (270)
+.+++-+.+.+..+.++++. .........++..|+++||+++|+++++|+ -+|+.++ ..+.
T Consensus 148 sglg~~t~~p~~~~~~~~~~~~~~~~~Ea~~~~~~Aa~~aL~kaGi~p~DID----iLIv~~S-~~~~------------ 210 (511)
T PLN02192 148 SGLGESTYLPEAVLNVPPNPCMAEARKEAETVMFGAIDQLLAKTSVKPKDIG----ILIVNCS-LFNP------------ 210 (511)
T ss_pred cCCCCcccCChhhccCCCCccHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCC----EEEEECC-CCCC------------
Confidence 33444444444444444332 111123568889999999999999998887 3444433 2221
Q ss_pred hHhhhhhhhHHHHHHHHcCCCC--CCcccc-ccchhHHHHHHHHHHHHhcCCCCEEEEeeeccccCchhHHhhhcCcccC
Q psy4744 103 WLLAHVRCLLANRIAYLFDLKG--PSFTID-NSWTGGIEVLRQAVQDISEGRVDTAIVGVSNLLLNANLNSLFQGLNRLS 179 (270)
Q Consensus 103 ~~~~~~~~~~a~~ia~~~gl~G--p~~~v~-~~cas~~~al~~A~~~i~~G~~d~~lv~g~~~~~~~~~~~~~~~~~~ls 179 (270)
...++..|...||++. +++.++ .+|++++.+|..|.+.|+++....+||+++|... .. ++
T Consensus 211 ------~PSlaa~I~n~lGlr~~i~afdLsgmGCSggl~aLdlA~~lL~a~~~~~aLVVstE~~S-~n-~y--------- 273 (511)
T PLN02192 211 ------TPSLSAMVINHYKLRGNILSYNLGGMGCSAGLISIDLAKHLLQVHPNSYALVISMENIT-LN-WY--------- 273 (511)
T ss_pred ------CchHHHHHHHHhCCCCCceEEEcccchhhhHHHHHHHHHHHHHcCCCCeEEEEEEEecc-cc-CC---------
Confidence 2356778999999974 688899 6999999999999999999999999999999843 11 10
Q ss_pred CCCCCcccCCCCCc----eeecCeeEEEEecCh
Q psy4744 180 PDGKTRSFDHLANG----YARSEGIVVLLLQRS 208 (270)
Q Consensus 180 ~~~~~~pfd~~~~g----~~~geGA~alvL~~~ 208 (270)
+..+++- .++||||||+||++.
T Consensus 274 -------~g~drs~lv~n~LFgDGAaAvLLs~~ 299 (511)
T PLN02192 274 -------FGNDRSMLVSNCLFRMGGAAILLSNK 299 (511)
T ss_pred -------CCCCHHHHhccccccccceEEEEecc
Confidence 0112222 368999999999874
No 123
>TIGR01833 HMG-CoA-S_euk 3-hydroxy-3-methylglutaryl-CoA-synthase, eukaryotic clade. Hydroxymethylglutaryl(HMG)-CoA synthase is the first step of isopentenyl pyrophosphate (IPP) biosynthesis via the mevalonate pathway. This pathway is found mainly in eukaryotes, but also in archaea and some bacteria. This model is specific for eukaryotes.
Probab=99.04 E-value=7.2e-09 Score=92.98 Aligned_cols=117 Identities=16% Similarity=0.186 Sum_probs=87.6
Q ss_pred hHHHHHHHHHHHHHHHCCCCCCCCCCCCeEEEEccCCCCccccccCccccchhhHhhhhhhhHHHHHHHHcC---CCC-C
Q psy4744 50 PLVRCFIEPCFEAILDAGINPKSLAGSNSSVYTNSCISDDESLGCDERLTTNFWLLAHVRCLLANRIAYLFD---LKG-P 125 (270)
Q Consensus 50 ~~~~l~l~a~~~Al~dAg~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~g---l~G-p 125 (270)
....|++.|++++|+++++++++|+ -|++++..+.+.. ..++..|...|+ .+. .
T Consensus 49 d~~tma~~AA~~lL~~a~id~~~Id----~Liv~TeS~~d~s------------------ps~a~~v~~lL~~lG~~~~~ 106 (454)
T TIGR01833 49 DINSLCLTVVSKLMERYNIDYNQIG----RLEVGTETIIDKS------------------KSVKTVLMQLFEESGNTDVE 106 (454)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCC----EEEEECCCCCCCC------------------CchHHHHHHHHHhcCCCCce
Confidence 4678999999999999999888887 6778887766532 234555666554 322 5
Q ss_pred CccccccchhHHHHHHHHHHHHhcCCC--CEEEEeeeccccCchhHHhhhcCcccCCCCCCcccCCCCCceeecCeeEEE
Q psy4744 126 SFTIDNSWTGGIEVLRQAVQDISEGRV--DTAIVGVSNLLLNANLNSLFQGLNRLSPDGKTRSFDHLANGYARSEGIVVL 203 (270)
Q Consensus 126 ~~~v~~~cas~~~al~~A~~~i~~G~~--d~~lv~g~~~~~~~~~~~~~~~~~~ls~~~~~~pfd~~~~g~~~geGA~al 203 (270)
++.+..+|+++..||..|..+|++|.. +.+||+++|...... .... ...|+||+|+
T Consensus 107 ~fDi~~AC~G~t~AL~~A~~~i~s~~~~~~~aLVV~sDia~y~~--------------~~~~--------~t~GaGAvAm 164 (454)
T TIGR01833 107 GIDTTNACYGGTAALFNAINWIESSSWDGRYALVVAGDIAVYAK--------------GNAR--------PTGGAGAVAM 164 (454)
T ss_pred EEeccccchhHHHHHHHHHHHHHcCCcCCCeEEEEEeccccccC--------------CCee--------eccccceEEE
Confidence 677999999999999999999999974 999999999821111 0011 1359999999
Q ss_pred EecChHH
Q psy4744 204 LLQRSET 210 (270)
Q Consensus 204 vL~~~~~ 210 (270)
||++...
T Consensus 165 Lv~~~~~ 171 (454)
T TIGR01833 165 LIGPNAP 171 (454)
T ss_pred EeccCcc
Confidence 9986543
No 124
>COG0183 PaaJ Acetyl-CoA acetyltransferase [Lipid metabolism]
Probab=98.98 E-value=3.4e-10 Score=100.54 Aligned_cols=57 Identities=26% Similarity=0.440 Sum_probs=51.4
Q ss_pred hHHHHHHHHcCCCC--CCccccccchhHHHHHHHHHHHHhcCCCCEEEEeeeccccCch
Q psy4744 111 LLANRIAYLFDLKG--PSFTIDNSWTGGIEVLRQAVQDISEGRVDTAIVGVSNLLLNAN 167 (270)
Q Consensus 111 ~~a~~ia~~~gl~G--p~~~v~~~cas~~~al~~A~~~i~~G~~d~~lv~g~~~~~~~~ 167 (270)
.++..++...|+.. |.++|+..|+||+.|+..|++.|++|.+|++|++|+|.+.+..
T Consensus 68 ~~ar~~a~~aGl~~~~p~~~V~~~c~SG~~Av~~A~~~I~sG~~dvvlagG~E~mS~~~ 126 (392)
T COG0183 68 NIARQAALAAGLPGSVPAVTVNRACASGLAAVRLAAQAIASGEADVVLAGGVEKMSDAP 126 (392)
T ss_pred cHHHHHHHHcCCCCCCCceEEeccchhHHHHHHHHHHHHHCCCCCEEEEEeeeeccCCC
Confidence 45667888999875 9999999999999999999999999999999999999876655
No 125
>PF02801 Ketoacyl-synt_C: Beta-ketoacyl synthase, C-terminal domain; InterPro: IPR014031 Beta-ketoacyl-ACP synthase 2.3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the C-terminal domain of beta-ketoacyl-ACP synthases. The active site is contained in a cleft betweeen N- and C-terminal domains, with residues from both domains contributing to substrate binding and catalysis [].; PDB: 2UV8_B 3HMJ_A 2VKZ_C 4EWG_A 1TQY_H 1E5M_A 1J3N_B 2VZ8_A 2VZ9_B 3O04_A ....
Probab=98.91 E-value=1.7e-09 Score=79.98 Aligned_cols=56 Identities=20% Similarity=0.307 Sum_probs=41.9
Q ss_pred cCceEeEEEeccCCCCCCCcCCCHHHHHHHHHHHHHHcCCCCCCccEEEcccCCCC
Q psy4744 215 YGEVLHAESRFYGSLERPFVGFNQASLVEFFTNFYQKARVNPGQVDFLEADGSAIK 270 (270)
Q Consensus 215 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~agi~~~did~v~~hgtgt~ 270 (270)
|+.+.+..+..++........|+..++.++|+++|+++|++|+|||||++|||||+
T Consensus 1 ya~i~g~~~~~dg~~~~~~~~p~~~~~~~~i~~al~~agi~~~~I~~i~~hg~Gt~ 56 (119)
T PF02801_consen 1 YAVIRGYGVNSDGARSSSLTAPNGAALARAIRRALADAGISPEDIDYIEAHGTGTP 56 (119)
T ss_dssp SEEEEEEEEEE-SSSTSSSSSTTHHHHHHHHHHHHHHHTS-GGGEEEEE----SSH
T ss_pred CEEEEEEEEECCCCCCCCCcCcCHHHHHHHHHHHHhhhccccccceeeeeeccccc
Confidence 35666777777774445568889999999999999999999999999999999985
No 126
>PF13723 Ketoacyl-synt_2: Beta-ketoacyl synthase, N-terminal domain
Probab=98.90 E-value=1.6e-08 Score=81.98 Aligned_cols=117 Identities=16% Similarity=0.130 Sum_probs=101.0
Q ss_pred CCHHHHhhcChHHHHHHHHHHHHHHHCCCCCCCCCCCCeEEEEccCCCCccc-------cccCccccchhhHhhhhhhhH
Q psy4744 40 LHSRLANVLDPLVRCFIEPCFEAILDAGINPKSLAGSNSSVYTNSCISDDES-------LGCDERLTTNFWLLAHVRCLL 112 (270)
Q Consensus 40 ~~~~~~~~~~~~~~l~l~a~~~Al~dAg~~~~~~~~~~~gv~~g~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~ 112 (270)
||+.+.|||++..||++.++.+++++. .+++ .+|+++..|+... +. ..+.++|..|..+++|.+
T Consensus 23 lp~m~rRRls~~~rla~~~a~~~~~~~----~~~d----~~VfaS~~Gel~~t~~ll~~l~-~~~~lSPT~Fs~SVHNA~ 93 (218)
T PF13723_consen 23 LPPMQRRRLSRLSRLALEAALECLAED----EQPD----AIVFASRHGELERTFKLLEALA-EEEELSPTAFSQSVHNAA 93 (218)
T ss_pred CCHHHHcccCHHHHHHHHHHHHHHhcc----CCCC----cEEEEeCCCcHHHHHHHHHHHH-hCCCcCccchhhhhhhHH
Confidence 899999999999999999999998652 1222 7888988888433 22 235689999999999999
Q ss_pred HHHHHHHcCCCCCCccccccchhHHHHHHHHHHHHhcCCCCEEEEeeeccccCc
Q psy4744 113 ANRIAYLFDLKGPSFTIDNSWTGGIEVLRQAVQDISEGRVDTAIVGVSNLLLNA 166 (270)
Q Consensus 113 a~~ia~~~gl~Gp~~~v~~~cas~~~al~~A~~~i~~G~~d~~lv~g~~~~~~~ 166 (270)
++.++...+.++|+.++..+-.|...||..|+..+..| .+.||++.+|.....
T Consensus 94 aG~~sI~~~~~~~~tal~a~~~sf~~aLleA~~~l~~~-~~~VLlv~~De~~p~ 146 (218)
T PF13723_consen 94 AGYWSIATKNTGPNTALAAGEDSFEAALLEAAAQLAEG-AEPVLLVCYDEPLPE 146 (218)
T ss_pred HHHHHHHhCCCCceEEEecCcchHHHHHHHHHHHHHcC-CCCEEEEEeCCCCCh
Confidence 99999999999999999999999999999999999999 999999999984443
No 127
>KOG1392|consensus
Probab=98.86 E-value=1.4e-09 Score=89.42 Aligned_cols=93 Identities=15% Similarity=0.158 Sum_probs=70.5
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCCeEEEEccCCCCccccccCccccchhhHhhhhhhhHHHHHHHHcCC--CCCCccc
Q psy4744 52 VRCFIEPCFEAILDAGINPKSLAGSNSSVYTNSCISDDESLGCDERLTTNFWLLAHVRCLLANRIAYLFDL--KGPSFTI 129 (270)
Q Consensus 52 ~~l~l~a~~~Al~dAg~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl--~Gp~~~v 129 (270)
+.|+.++....|+...++...+| -+++|+.. +..-.++++...+..-|+ +-|..+|
T Consensus 67 hdlar~al~~ll~kt~lpke~~d----yii~gtvi------------------qevktsniareaal~agfsdktpahtv 124 (465)
T KOG1392|consen 67 HDLAREALKALLEKTKLPKEQLD----YIICGTVI------------------QEVKTSNIAREAALLAGFSDKTPAHTV 124 (465)
T ss_pred hHHHHHHHHHHHHhccCCHHHhc----eeeehhhH------------------HHHhcchHHHHHHHhcCCCCCCcccee
Confidence 56777777778888887766665 34555432 222235566666666676 4599999
Q ss_pred cccchhHHHHHHHHHHHHhcCCCCEEEEeeeccccCc
Q psy4744 130 DNSWTGGIEVLRQAVQDISEGRVDTAIVGVSNLLLNA 166 (270)
Q Consensus 130 ~~~cas~~~al~~A~~~i~~G~~d~~lv~g~~~~~~~ 166 (270)
.-+|-|+..|+-.+.-+|..|.+|+++.||+|.+...
T Consensus 125 tmacissn~amttgmgliatg~~dvivaggvelmsdv 161 (465)
T KOG1392|consen 125 TMACISSNVAMTTGMGLIATGNADVIVAGGVELMSDV 161 (465)
T ss_pred eeehhccchhhhccceeEeeCCcCEEEEcceeecccC
Confidence 9999999999999999999999999999999976543
No 128
>PLN00415 3-ketoacyl-CoA synthase
Probab=98.77 E-value=6.4e-08 Score=86.43 Aligned_cols=120 Identities=13% Similarity=0.149 Sum_probs=83.8
Q ss_pred HHHHHHH-HHHHHHHHCCCCCCCCCCCCeEEEEccCCCCccccccCccccchhhHhhhhhhhHHHHHHHHcCCCC--CCc
Q psy4744 51 LVRCFIE-PCFEAILDAGINPKSLAGSNSSVYTNSCISDDESLGCDERLTTNFWLLAHVRCLLANRIAYLFDLKG--PSF 127 (270)
Q Consensus 51 ~~~l~l~-a~~~Al~dAg~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl~G--p~~ 127 (270)
...|.+. |+.+||+++|+++++|+ -+++. +.+.+. ....+..+...+|++. ..+
T Consensus 133 e~em~i~~A~~~aL~~aGi~p~dID----~LIvs-~T~~~~------------------~Pslaa~l~~~LGLr~~v~~~ 189 (466)
T PLN00415 133 ESELVIFGALNSLFKKTGIEPREVG----IFIVN-CSLFNP------------------NPSLSSMIVNRYKLKTDVKTY 189 (466)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCC----EEEEE-CcCCCC------------------CchHHHHHHHHhCCCCCceEE
Confidence 4455554 77788999999998886 33433 222211 1345677889999962 456
Q ss_pred cccc-cchhHHHHHHHHHHHHhcCCCCEEEEeeeccccCchhHHhhhcCcccCCCCCCcccCCCC--CceeecCeeEEEE
Q psy4744 128 TIDN-SWTGGIEVLRQAVQDISEGRVDTAIVGVSNLLLNANLNSLFQGLNRLSPDGKTRSFDHLA--NGYARSEGIVVLL 204 (270)
Q Consensus 128 ~v~~-~cas~~~al~~A~~~i~~G~~d~~lv~g~~~~~~~~~~~~~~~~~~ls~~~~~~pfd~~~--~g~~~geGA~alv 204 (270)
.++. +|++++.+|..|.+.++++....+||+++|... ..... +-|+.. ...++||||+|+|
T Consensus 190 dL~gmGCsggv~aL~lA~~ll~a~~~~~aLVVs~E~~S-~~~~~---------------~~dr~~lv~n~LFgDGAAAvl 253 (466)
T PLN00415 190 NLSGMGCSAGAISVDLATNLLKANPNTYAVIVSTENMT-LSMYR---------------GNDRSMLVPNCLFRVGGAAVM 253 (466)
T ss_pred EeccccchHHHHHHHHHHHHHHhCCCCEEEEEEEeccc-ccccC---------------CCcHhHhccceeecccceEEE
Confidence 7887 999999999999999999999999999999832 21100 001000 1247899999999
Q ss_pred ecChH
Q psy4744 205 LQRSE 209 (270)
Q Consensus 205 L~~~~ 209 (270)
|++..
T Consensus 254 Ls~~~ 258 (466)
T PLN00415 254 LSNRS 258 (466)
T ss_pred EecCc
Confidence 99753
No 129
>PF08392 FAE1_CUT1_RppA: FAE1/Type III polyketide synthase-like protein; InterPro: IPR013601 This domain is found in proteins that are described as 3-ketoacyl-CoA synthases, type III polyketide synthases, fatty acid elongases and fatty acid condensing enzymes, and are found in both prokaryotic and eukaryotic (mainly plant) species. The region contains the active site residues, as well as motifs involved in substrate binding []. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0006633 fatty acid biosynthetic process, 0016020 membrane
Probab=98.69 E-value=2.2e-07 Score=77.78 Aligned_cols=125 Identities=11% Similarity=0.107 Sum_probs=89.6
Q ss_pred ChHHHHHHHHHHHHHHHCCCCCCCCCCCCeEEEEccCCCCccccccCccccchhhHhhhhhhhHHHHHHHHcCCCCCC--
Q psy4744 49 DPLVRCFIEPCFEAILDAGINPKSLAGSNSSVYTNSCISDDESLGCDERLTTNFWLLAHVRCLLANRIAYLFDLKGPS-- 126 (270)
Q Consensus 49 ~~~~~l~l~a~~~Al~dAg~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl~Gp~-- 126 (270)
+....++..++.++|+.+|+.+++|+ .+|+.++.. . ....++..|...||++.-.
T Consensus 81 ~Eae~v~f~av~~LL~ktgv~p~dId----iLVvncs~f-~------------------ptPSLsamIvnr~~mr~di~~ 137 (290)
T PF08392_consen 81 EEAEMVIFGAVDDLLAKTGVKPSDID----ILVVNCSLF-N------------------PTPSLSAMIVNRYGMRSDIKS 137 (290)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCC----EEEEECcCC-C------------------cCCcHHHHHHHHhCCCcCeee
Confidence 33556788899999999999998876 455544432 1 1235677899999998644
Q ss_pred cc-ccccchhHHHHHHHHHHHHhcCCCCEEEEeeeccccCchhHHhhhcCcccCCCCCCcccCCCCCceeecCeeEEEEe
Q psy4744 127 FT-IDNSWTGGIEVLRQAVQDISEGRVDTAIVGVSNLLLNANLNSLFQGLNRLSPDGKTRSFDHLANGYARSEGIVVLLL 205 (270)
Q Consensus 127 ~~-v~~~cas~~~al~~A~~~i~~G~~d~~lv~g~~~~~~~~~~~~~~~~~~ls~~~~~~pfd~~~~g~~~geGA~alvL 205 (270)
+. ...||++|+.+|.+|.++++.-.-..+||+.+|... +..+.+-++.-.+ ...++.+|++|++|
T Consensus 138 ~nLsGMGCsAgliai~lA~~lL~~~p~~~ALVVstE~~s-~~~Y~G~~rsmlv-------------~NcLFr~GgAAvLL 203 (290)
T PF08392_consen 138 YNLSGMGCSAGLIAIDLAKDLLQAHPNSYALVVSTENIS-ANWYRGNDRSMLV-------------SNCLFRMGGAAVLL 203 (290)
T ss_pred ecccCCcchhhHHHHHHHHHHHHhCCCcEEEEEEEeecc-cccccCCcHHHhh-------------ccccccCCceeEEe
Confidence 33 345899999999999999999999999999999843 3322222221111 12368999999999
Q ss_pred cChHH
Q psy4744 206 QRSET 210 (270)
Q Consensus 206 ~~~~~ 210 (270)
.+...
T Consensus 204 Sn~~~ 208 (290)
T PF08392_consen 204 SNKPS 208 (290)
T ss_pred ecCcc
Confidence 87654
No 130
>PF07451 SpoVAD: Stage V sporulation protein AD (SpoVAD); InterPro: IPR010894 This family contains the bacterial stage V sporulation protein AD (SpoVAD), which is approximately 340 residues long. This is one of six proteins encoded by the spoVA operon, which is transcribed exclusively in the forespore at about the time of dipicolinic acid (DPA) synthesis in the mother cell. The functions of the proteins encoded by the spoVA operon are unknown, but it has been suggested they are involved in DPA transport during sporulation [].; PDB: 3LMA_D 3LM6_A.
Probab=98.65 E-value=3.3e-07 Score=76.42 Aligned_cols=176 Identities=14% Similarity=0.102 Sum_probs=98.2
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCeEEEEccCCCCccccccCccccchhhHhhhhhhhHHHHHHHHcCCCCCCcccc
Q psy4744 51 LVRCFIEPCFEAILDAGINPKSLAGSNSSVYTNSCISDDESLGCDERLTTNFWLLAHVRCLLANRIAYLFDLKGPSFTID 130 (270)
Q Consensus 51 ~~~l~l~a~~~Al~dAg~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl~Gp~~~v~ 130 (270)
..+|..+|+..||+.+++..++|+ .+++. +.. + ....+...++.|++ |-+=+.
T Consensus 51 E~~m~~~A~~~al~Ka~l~~~dId-----~~~aG---DLl---------------n--Q~i~s~f~ar~l~i--Pf~Gly 103 (329)
T PF07451_consen 51 ESKMQKEAVELALKKAGLKKEDID-----YLFAG---DLL---------------N--QIISSSFAARDLGI--PFLGLY 103 (329)
T ss_dssp HHHHHHHHHHHHHHHTT--GGG-S-----EEEEE---ETT---------------C--CCCHHHHHHHHHT----EEEB-
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCe-----EEEeh---hhh---------------h--hhHHHHHHHHhcCC--Cccchh
Confidence 457899999999999999988876 33321 110 0 12344556667777 888899
Q ss_pred ccchhHHHHHHHHHHHHhcCCCCEEEEeeeccccCchhHHhhhcCcccCCCCCCcccCCCCCceeecCeeEEEEecChHH
Q psy4744 131 NSWTGGIEVLRQAVQDISEGRVDTAIVGVSNLLLNANLNSLFQGLNRLSPDGKTRSFDHLANGYARSEGIVVLLLQRSET 210 (270)
Q Consensus 131 ~~cas~~~al~~A~~~i~~G~~d~~lv~g~~~~~~~~~~~~~~~~~~ls~~~~~~pfd~~~~g~~~geGA~alvL~~~~~ 210 (270)
.+||+...+|.+|..+|..|-+|.+|++.+..+.+..-.+.|- ...+..||-... ---=|||++||.+...
T Consensus 104 gACST~~e~l~laa~~vdgg~a~~vla~tSSH~~tAERQfR~P-----~EyG~Qrp~tAq----wTVTGaGa~il~~~~~ 174 (329)
T PF07451_consen 104 GACSTMMESLALAAMLVDGGFADYVLAATSSHFATAERQFRFP-----TEYGGQRPPTAQ----WTVTGAGAAILSKEGS 174 (329)
T ss_dssp -CCCHHHHHHHHHHHHHHTTS-SEEEEEEEE-CCHHHHHT--------GGGT----TT------EE--EEEEEEEESS--
T ss_pred hHHHHHHHHHHHHHHHHhCCCcceEEEEeccccchhhhhccCc-----hhccCCCCCccc----EEEeceEEEEEecCCC
Confidence 9999999999999999999999999999887755544333221 122233443221 1234799999987654
Q ss_pred HHhhcCceEeEEEeccCCCCCCC--cCCCHHHHHHHHHHHHHHcCCCCCCccEEEc
Q psy4744 211 ALRSYGEVLHAESRFYGSLERPF--VGFNQASLVEFFTNFYQKARVNPGQVDFLEA 264 (270)
Q Consensus 211 A~~~~g~~~~~~~~~~~~~~~~~--~~~~~~~~~~a~~~al~~agi~~~did~v~~ 264 (270)
..++..+ .-+++..+|.. ++. -.-..++..+.|.+-|++.|.+|+|.|.|.+
T Consensus 175 ~p~It~~-T~GkVvD~G~~-D~~nMGaAMAPAA~dTI~~h~~D~g~~p~dYDlIvT 228 (329)
T PF07451_consen 175 GPRITHA-TIGKVVDMGIK-DPNNMGAAMAPAAADTIEQHFKDTGRSPDDYDLIVT 228 (329)
T ss_dssp SEEEEEE-E----B-SS----TT-HHHHHHHHHHHHHHHHHHHCT--GGG-SEEEE
T ss_pred CcEEEEE-EEEEEEEcCCC-CcccchhhHhHHHHHHHHHHHHHhCCChhhcCeEEe
Confidence 3222111 12244445543 222 1112355688999999999999999999975
No 131
>PF00195 Chal_sti_synt_N: Chalcone and stilbene synthases, N-terminal domain; InterPro: IPR001099 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2.3.1.74 from EC) and stilbene synthases (STS) (formerly known as resveratrol synthases) are related plant enzymes. CHS is an important enzyme in flavanoid biosynthesis and STS is a key enzyme in stilbene-type phyloalexin biosynthesis. Both enzymes catalyse the addition of three molecules of malonyl-CoA to a starter CoA ester (a typical example is 4-coumaroyl-CoA), producing either a chalcone (with CHS) or stilbene (with STS) []. These enzymes have a conserved cysteine residue, located in the central section of the protein sequence, which is essential for the catalytic activity of both enzymes and probably represents the binding site for the 4-coumaryl-CoA group [].; GO: 0016746 transferase activity, transferring acyl groups, 0009058 biosynthetic process; PDB: 3EUO_B 3EUT_C 3EUQ_D 3E1H_A 3AWK_A 3AWJ_A 2H84_A 3A5S_A 3A5Q_B 3A5R_A ....
Probab=98.53 E-value=2.2e-07 Score=75.64 Aligned_cols=121 Identities=17% Similarity=0.139 Sum_probs=81.0
Q ss_pred cChHHHHHHHHHHHHHHHCCCCCCCCCCCCeEEEEccCCCCccccccCccccchhhHhhhhhhhHHHHHHHHcCCCCCC-
Q psy4744 48 LDPLVRCFIEPCFEAILDAGINPKSLAGSNSSVYTNSCISDDESLGCDERLTTNFWLLAHVRCLLANRIAYLFDLKGPS- 126 (270)
Q Consensus 48 ~~~~~~l~l~a~~~Al~dAg~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl~Gp~- 126 (270)
......|+.+|+++||+++|+++.+|+ .+|+-++.+-. ...+-.++...|||+..+
T Consensus 97 ~~~a~~L~~~Aa~~AL~~~g~~~~dIt----hlv~vs~TG~~-------------------~PglD~~l~~~LgL~~~v~ 153 (226)
T PF00195_consen 97 AEEAPPLAEEAARKALAEAGLDPSDIT----HLVTVSCTGIA-------------------APGLDARLINRLGLRPDVQ 153 (226)
T ss_dssp HHHHHHHHHHHHHHHHHHHTS-GGGEC----EEEEEESSSSE-------------------CS-HHHHHHHHHT--TTSE
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCcccc----eEEEEecCCcC-------------------CCchhHHHHhcCCCCCCcE
Confidence 344568999999999999999887765 56666555432 123445788999997533
Q ss_pred --ccccccchhHHHHHHHHHHHHhcCCCCEEEEeeeccccCchhHHhhhcCcccCCCCCCcccCCCCCc----eeecCee
Q psy4744 127 --FTIDNSWTGGIEVLRQAVQDISEGRVDTAIVGVSNLLLNANLNSLFQGLNRLSPDGKTRSFDHLANG----YARSEGI 200 (270)
Q Consensus 127 --~~v~~~cas~~~al~~A~~~i~~G~~d~~lv~g~~~~~~~~~~~~~~~~~~ls~~~~~~pfd~~~~g----~~~geGA 200 (270)
....-||..|..+|..|....++..-..|||+.+|... . .+.. |.|.+.+. .+|||||
T Consensus 154 R~~i~~~GC~gg~~~L~~A~~~~~~~p~a~VLvv~vElcs-l-~~~~--------------~~~~~~~~lv~~aLFgDGa 217 (226)
T PF00195_consen 154 RTPIFGMGCAGGAAGLRRAKDIARANPGARVLVVCVELCS-L-HFQA--------------PNDDSLDNLVANALFGDGA 217 (226)
T ss_dssp EEEEES-GGGHHHHHHHHHHHHHHHSTT-EEEEEEEEEGG-G-THHH--------------CCTTSHHHHHHHHHB-EEE
T ss_pred EEEEeccchhhHHHHHHHHHHHHhCCccceEEEEEEEeeE-E-EEec--------------CCcccHHHHhHHhhhcCCc
Confidence 22556899999999999999999999999999999732 2 1110 11111111 2589999
Q ss_pred EEEEecC
Q psy4744 201 VVLLLQR 207 (270)
Q Consensus 201 ~alvL~~ 207 (270)
+|+||..
T Consensus 218 AA~vv~~ 224 (226)
T PF00195_consen 218 AAVVVGA 224 (226)
T ss_dssp EEEEEES
T ss_pred eEEEEcc
Confidence 9999975
No 132
>PF08545 ACP_syn_III: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; InterPro: IPR013751 Fatty acid synthesis (FAS) is a vital aspect of cellular physiology which can occur by two distinct pathways. The FAS I pathway, which generally only produces palmitate, is found in eukaryotes and is performed either by a single polypeptide which contains all the reaction centres needed to form a fatty acid, or by two polypeptides which interact to form a multifunctional complex. The FAS II pathway, which is capable of producing many different fatty acids, is found in mitochondria, bacteria, plants and parasites, and is performed by many distinct proteins, each of which catalyses a single step within the pathway. The large diversity of products generated by this pathway is possible because the acyl carrier protein (ACP) intermediates are diffusible entities that can be diverted into other biosynthetic pathways []. 3-Oxoacyl-[acyl carrier protein (ACP)] synthase III catalyses the first condensation step within the FAS II pathway, using acetyl-CoA as the primer and malonyl-ACP as the acceptor, as shown below. Acyl-[ACP] + malonyl-[ACP] = 3-oxoacyl-[ACP] + CO(2) + [ACP] The oxoacyl-ACP formed by this reaction subsequently enters the elongation cycle, where the acyl chain is progressively lengthened by the combined activities of several enzymes. The enzymes studied so far are homodimers, where each monomer consists of two domains (N-terminal and C-terminal) which are similar in structure, but not in sequence [, ]. This entry represents a conserved region within the N-terminal domain.; GO: 0004315 3-oxoacyl-[acyl-carrier-protein] synthase activity, 0006633 fatty acid biosynthetic process; PDB: 1ZOW_C 1UB7_B 3IL7_A 3IL3_A 2X3E_B 4DFE_C 3LED_B 3ROW_B 3S23_A 3S1Z_A ....
Probab=98.51 E-value=6.1e-08 Score=66.34 Aligned_cols=64 Identities=23% Similarity=0.316 Sum_probs=47.1
Q ss_pred ccccccchhHHHHHHHHHHHHhcCCCCEEEEeeeccccCchhHHhhhcCcccCCCCCCcccCCCCCceeecCeeEEEEec
Q psy4744 127 FTIDNSWTGGIEVLRQAVQDISEGRVDTAIVGVSNLLLNANLNSLFQGLNRLSPDGKTRSFDHLANGYARSEGIVVLLLQ 206 (270)
Q Consensus 127 ~~v~~~cas~~~al~~A~~~i~~G~~d~~lv~g~~~~~~~~~~~~~~~~~~ls~~~~~~pfd~~~~g~~~geGA~alvL~ 206 (270)
+.|+.+|++.+.||..|..+|++|.++.+||++.|......... + ....+++||||+|+||+
T Consensus 1 fDi~~~C~g~~~al~~A~~~i~~g~~~~~Lvv~~d~~s~~~~~~-----------------~-~~~~~~~gDgAaA~vl~ 62 (80)
T PF08545_consen 1 FDINQACAGFLYALDVAAALIASGRAKNALVVGGDRLSRIVDRT-----------------D-RQTAFIFGDGAAAVVLS 62 (80)
T ss_dssp EEEE-GGGHHHHHHHHHHHHHHTTS-SEEEEEEEEEGGGGSHTT-----------------H-HHHHTTB-EEEEEEEEE
T ss_pred CcccccchHHHHHHHHHHHHHhhccCCEEEEEeecccccccccc-----------------c-cCcceeecchheEEEEE
Confidence 35789999999999999999999999999999999833211100 0 11233689999999999
Q ss_pred Ch
Q psy4744 207 RS 208 (270)
Q Consensus 207 ~~ 208 (270)
+.
T Consensus 63 ~~ 64 (80)
T PF08545_consen 63 RD 64 (80)
T ss_dssp EE
T ss_pred ec
Confidence 86
No 133
>COG3424 BcsA Predicted naringenin-chalcone synthase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.41 E-value=3.7e-06 Score=70.14 Aligned_cols=180 Identities=11% Similarity=0.049 Sum_probs=114.7
Q ss_pred ChHHHHHHHHHHHHHHHCCCCCCCCCCCCeEEEEccCCCCccccccCccccchhhHhhhhhhhHHHHHHHHcCCCCCCcc
Q psy4744 49 DPLVRCFIEPCFEAILDAGINPKSLAGSNSSVYTNSCISDDESLGCDERLTTNFWLLAHVRCLLANRIAYLFDLKGPSFT 128 (270)
Q Consensus 49 ~~~~~l~l~a~~~Al~dAg~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl~Gp~~~ 128 (270)
.....+..++.++||+++++.+.+|+ .|+.-++.+-. ...+=.+|...|||.-.+-.
T Consensus 74 e~a~~l~v~a~r~aL~~~~l~pedId----~vv~vtsTG~~-------------------~Ps~dari~~~Lgl~p~~~R 130 (356)
T COG3424 74 EEAVPLGVDALRRALDGSPLRPEDID----AVVTVTSTGLA-------------------TPSLDARIVGELGLSPDTRR 130 (356)
T ss_pred HHHHHHHHHHHHHHhccCCCCHHHCc----EEEEEeecccc-------------------CCChhHHHHhhcCCCCccce
Confidence 34567899999999999999888877 34444333321 12334568888998642222
Q ss_pred ---ccccchhHHHHHHHHHHHHhcCCCCEEEEeeeccccCchhHHhhhcCcccCCCCCCcccCCCCCc----eeecCeeE
Q psy4744 129 ---IDNSWTGGIEVLRQAVQDISEGRVDTAIVGVSNLLLNANLNSLFQGLNRLSPDGKTRSFDHLANG----YARSEGIV 201 (270)
Q Consensus 129 ---v~~~cas~~~al~~A~~~i~~G~~d~~lv~g~~~~~~~~~~~~~~~~~~ls~~~~~~pfd~~~~g----~~~geGA~ 201 (270)
-.-+|+.|..++..|.+..++.-...|+|+.+|.. +.. + .+.|..... -++|||++
T Consensus 131 vpv~glGCaaga~glara~~y~ra~P~~~vlvV~vELC-SLt-~---------------~~~d~t~s~lVgtaLF~DG~A 193 (356)
T COG3424 131 VPVWGLGCAAGAAGLARARDYCRAAPDANVLVVCVELC-SLT-Y---------------VFADDTKSNLVGTALFGDGAA 193 (356)
T ss_pred eeeecchhhhhhhHHHHHHHHHhhCccceEEEEEeeee-eee-e---------------ecCCCCcccceeeeeecCCee
Confidence 34589999999999999999999999999999972 111 1 111111112 25899999
Q ss_pred EEEecChHHHHh--hcCceEeE----------EEeccCCCCCCC---cCCCH-----HHHHHHHHHHHHHcCCCCCCccE
Q psy4744 202 VLLLQRSETALR--SYGEVLHA----------ESRFYGSLERPF---VGFNQ-----ASLVEFFTNFYQKARVNPGQVDF 261 (270)
Q Consensus 202 alvL~~~~~A~~--~~g~~~~~----------~~~~~~~~~~~~---~~~~~-----~~~~~a~~~al~~agi~~~did~ 261 (270)
|+|+.-...++. .....+.. .+.+|.....++ ...+. ..+...+...|..-+++.+||+.
T Consensus 194 A~vv~gd~~~~~~~~~~p~i~~s~StL~~dse~~Mgwdv~d~G~~~vlSrdlp~lIe~~l~~~V~~fL~~~~ls~~dI~~ 273 (356)
T COG3424 194 AVVVSGDRRAEGKRPLRPDILDSFSTLYPDSEDIMGWDVGDQGLKVVLSRDLPNLIESYLAPNVTTFLATHGLSIEDIEA 273 (356)
T ss_pred EEEEeccccccccCCCCceecccccccCCccccccceeecCCcEEEEEcCchhHHHHHHhhhhHHHHHHHcCCchhhhce
Confidence 999986333221 10111110 112222222232 11122 33577889999999999999999
Q ss_pred EEcccCC
Q psy4744 262 LEADGSA 268 (270)
Q Consensus 262 v~~hgtg 268 (270)
+-.|=-|
T Consensus 274 w~~HPGG 280 (356)
T COG3424 274 WVVHPGG 280 (356)
T ss_pred eeeCCCC
Confidence 9999544
No 134
>PF01154 HMG_CoA_synt_N: Hydroxymethylglutaryl-coenzyme A synthase N terminal; InterPro: IPR013528 Synonym(s): 3-hydroxy-3-methylglutaryl-coenzyme A synthase, HMG-CoA synthase. Hydroxymethylglutaryl-CoA synthase (2.3.3.10 from EC) catalyses the condensation of acetyl-CoA with acetoacetyl-CoA to produce HMG-CoA and CoA, the second reaction in the mevalonate-dependent isoprenoid biosynthesis pathway. HMG-CoA synthase contains an important catalytic cysteine residue that acts as a nucleophile in the first step of the reaction: the acetylation of the enzyme by acetyl-CoA (its first substrate) to produce an acetyl-enzyme thioester, releasing the reduced coenzyme A. The subsequent nucleophilic attack on acetoacetyl-CoA (its second substrate) leads to the formation of HMG-CoA []. HMG-CoA synthase occurs in eukaryotes, archaea and certain bacteria []. In vertebrates, there are two isozymes located in different subcellular compartments: a cytosolic form that is the starting point of the mevalonate pathway (leads to cholesterol and other sterolic and isoprenoid compounds), and a mitochondrial form responsible for ketone body biosynthesis. HMG-CoA is also found in other eukaryotes such as insects, plants and fungi []. In bacteria, isoprenoid precursors are generally synthesised via an alternative, non-mevalonate pathway, however a number of Gram-positive pathogens utilise a mevalonate pathway involving HMG-CoA synthase that is parallel to that found in eukaryotes [, ]. This entry represents the N-terminal domain of HMG-CoA synthase enzymes from both eukaryotes and prokaryotes.; GO: 0004421 hydroxymethylglutaryl-CoA synthase activity, 0008299 isoprenoid biosynthetic process; PDB: 1X9E_B 2HDB_B 2WYA_C 2P8U_A 3V4X_A 3V4N_C 3LEH_A 1TXT_D 1TVZ_A 2FA0_A ....
Probab=98.12 E-value=9.3e-06 Score=63.05 Aligned_cols=90 Identities=19% Similarity=0.270 Sum_probs=67.7
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCeEEEEccCCCCccccccCccccchhhHhhhhhhhHHHHHHHHcCCCCCC----
Q psy4744 51 LVRCFIEPCFEAILDAGINPKSLAGSNSSVYTNSCISDDESLGCDERLTTNFWLLAHVRCLLANRIAYLFDLKGPS---- 126 (270)
Q Consensus 51 ~~~l~l~a~~~Al~dAg~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl~Gp~---- 126 (270)
..-|++.|++..|++.++++++|. -+++|+..+-+.. -.++..+..+||+.|.+
T Consensus 53 ~vTmA~nAa~~ll~~~~id~~~Ig----~l~vgTES~vD~s------------------Ks~~t~v~~ll~~s~~~~~~~ 110 (174)
T PF01154_consen 53 IVTMAANAAKPLLDRYNIDPDDIG----RLIVGTESGVDKS------------------KSISTYVHQLLGLSGNPDCRG 110 (174)
T ss_dssp HHHHHHHHHHTTHHHHT-HHHHEE----EEEEE-SS-SBSS------------------S-HHHHHHHHTTTTT-SSSEE
T ss_pred HHHHHHHHHHHHHHHcCCCHHHcc----EEEEecccccccc------------------ccHHHHHHHHhCcCCCCceee
Confidence 456899999999999887766554 4667776554431 23677788999996532
Q ss_pred ccccccchhHHHHHHHHHHHHhcCCCC--EEEEeeecc
Q psy4744 127 FTIDNSWTGGIEVLRQAVQDISEGRVD--TAIVGVSNL 162 (270)
Q Consensus 127 ~~v~~~cas~~~al~~A~~~i~~G~~d--~~lv~g~~~ 162 (270)
+-+-.+|-+|..||..|+.+|+++..| .+||+++|.
T Consensus 111 ~e~k~ACygGTaAL~~a~~~v~s~~~~g~~aLVVasDi 148 (174)
T PF01154_consen 111 VEMKQACYGGTAALQNAVNWVASSPWDGRKALVVASDI 148 (174)
T ss_dssp EEEESGGGHHHHHHHHHHHHHCSTTSTTEEEEEEEEEE
T ss_pred eehhhhhHHHHHHHHHHHHHHhcCCCCCCeEEEEeccc
Confidence 447889999999999999999999765 999999998
No 135
>PF02803 Thiolase_C: Thiolase, C-terminal domain; InterPro: IPR020617 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2.3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 2WUA_B 4E1L_B 3SVK_A 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2IB8_B 2IBU_A 2IB9_C ....
Probab=95.63 E-value=0.0068 Score=44.77 Aligned_cols=28 Identities=18% Similarity=0.300 Sum_probs=21.9
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEccc
Q psy4744 239 ASLVEFFTNFYQKARVNPGQVDFLEADG 266 (270)
Q Consensus 239 ~~~~~a~~~al~~agi~~~did~v~~hg 266 (270)
.+...+++++|+++|++++|||++|.|=
T Consensus 22 ~~p~~A~~~al~~ag~~~~did~~Ei~E 49 (123)
T PF02803_consen 22 LGPVPAARKALERAGLTPDDIDVIEINE 49 (123)
T ss_dssp GTHHHHHHHHHHHHT--GGGESEEEE--
T ss_pred chHHHHHHHHHHHhCCCccccchhhccc
Confidence 3567899999999999999999999984
No 136
>KOG1393|consensus
Probab=91.60 E-value=2.4 Score=37.26 Aligned_cols=113 Identities=19% Similarity=0.247 Sum_probs=73.6
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCeEEEEccCCCCccccccCccccchhhHhhhhhhhHHHHHHHHcCCCC----CC
Q psy4744 51 LVRCFIEPCFEAILDAGINPKSLAGSNSSVYTNSCISDDESLGCDERLTTNFWLLAHVRCLLANRIAYLFDLKG----PS 126 (270)
Q Consensus 51 ~~~l~l~a~~~Al~dAg~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl~G----p~ 126 (270)
..-|.+.++.+.++.-.++++.|-+ +-||+..--.. +-.+=..+-.+|+=.| ..
T Consensus 60 i~Sl~ltvvs~Lmery~i~~~~IGR----LEVGTETiiDK------------------SKSVKt~LMqLF~~sgNtdIEG 117 (462)
T KOG1393|consen 60 IISLSLTVVSRLMERYNIDPDSIGR----LEVGTETIIDK------------------SKSVKTVLMQLFEESGNTDIEG 117 (462)
T ss_pred hhhhhHHHHHHHHHHhCCChhhcce----EEecceecccc------------------chHHHHHHHHHhhhcCCCcccc
Confidence 4467788999999999998877652 44555432211 1112233555665222 33
Q ss_pred ccccccchhHHHHHHHHHHHHhcCCC--CEEEEeeeccccCchhHHhhhcCcccCCCCCCcccCCCCCceeecCeeEEEE
Q psy4744 127 FTIDNSWTGGIEVLRQAVQDISEGRV--DTAIVGVSNLLLNANLNSLFQGLNRLSPDGKTRSFDHLANGYARSEGIVVLL 204 (270)
Q Consensus 127 ~~v~~~cas~~~al~~A~~~i~~G~~--d~~lv~g~~~~~~~~~~~~~~~~~~ls~~~~~~pfd~~~~g~~~geGA~alv 204 (270)
+...++|=+|..||..|.+||.+..- ..+||+..|.. +-+++.+||-. |-||.|++
T Consensus 118 iDttnACYGGtaALfnavnWiESssWDGr~aivV~gDIA--------------vY~~G~aRpTG--------GAgAVAmL 175 (462)
T KOG1393|consen 118 IDTTNACYGGTAALFNAVNWIESSSWDGRYAIVVCGDIA--------------VYAKGNARPTG--------GAGAVAML 175 (462)
T ss_pred ccccccccccHHHHHHHhhhhhhcccCCceeEEEEeeEE--------------EecCCCCCCCC--------CcceEEEE
Confidence 55778999999999999999997654 46777777762 22345566622 67888888
Q ss_pred ecC
Q psy4744 205 LQR 207 (270)
Q Consensus 205 L~~ 207 (270)
+.+
T Consensus 176 IgP 178 (462)
T KOG1393|consen 176 IGP 178 (462)
T ss_pred EcC
Confidence 876
No 137
>PRK05963 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=81.61 E-value=1 Score=39.05 Aligned_cols=32 Identities=3% Similarity=-0.101 Sum_probs=26.3
Q ss_pred HHHHHHHHHHHHHHcCCCCCCccEEEcccCCCC
Q psy4744 238 QASLVEFFTNFYQKARVNPGQVDFLEADGSAIK 270 (270)
Q Consensus 238 ~~~~~~a~~~al~~agi~~~did~v~~hgtgt~ 270 (270)
.+-..+|.+++|+++|++|+|||+|. ++|.||
T Consensus 53 ~~la~~Aa~~aL~~ag~~~~~Id~li-~~t~~~ 84 (326)
T PRK05963 53 SDLAASAGDMALSDAGIERSDIALTL-LATSTP 84 (326)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEE-EECCCC
Confidence 45568999999999999999999987 455553
No 138
>TIGR00748 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase, putative. Thus, although there is no experimental evidence supporting this name, the bioinformatics-based conclusion appears to be sound.
Probab=79.14 E-value=2.4 Score=37.19 Aligned_cols=31 Identities=23% Similarity=0.260 Sum_probs=25.5
Q ss_pred HHHHHHHHHHHHHHcCCCCCCccEEEcccCCC
Q psy4744 238 QASLVEFFTNFYQKARVNPGQVDFLEADGSAI 269 (270)
Q Consensus 238 ~~~~~~a~~~al~~agi~~~did~v~~hgtgt 269 (270)
.+-..++.++||+++|++++|||.+. ++|.+
T Consensus 51 ~~la~~Aa~~aL~~agl~~~dID~li-~~s~~ 81 (345)
T TIGR00748 51 ATIGVEAARNALKRAKIDPKDIGAVY-VGSES 81 (345)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEE-EEecC
Confidence 45568999999999999999999986 34443
No 139
>PRK08304 stage V sporulation protein AD; Validated
Probab=78.46 E-value=1.7 Score=37.64 Aligned_cols=26 Identities=23% Similarity=0.351 Sum_probs=23.3
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEc
Q psy4744 239 ASLVEFFTNFYQKARVNPGQVDFLEA 264 (270)
Q Consensus 239 ~~~~~a~~~al~~agi~~~did~v~~ 264 (270)
.-..+|+++||++||++++|||++..
T Consensus 58 eLa~eAa~~ALekAGI~~~DID~lI~ 83 (337)
T PRK08304 58 KMMEDAIQQALQKANLKKSDIDYLLA 83 (337)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEE
Confidence 45699999999999999999999864
No 140
>PRK12880 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=78.21 E-value=1.5 Score=38.68 Aligned_cols=28 Identities=11% Similarity=-0.007 Sum_probs=24.0
Q ss_pred HHHHHHHHHHHHHHcCCCCCCccEEEcc
Q psy4744 238 QASLVEFFTNFYQKARVNPGQVDFLEAD 265 (270)
Q Consensus 238 ~~~~~~a~~~al~~agi~~~did~v~~h 265 (270)
.+-..+|.+++|+++|++++|||+|...
T Consensus 61 ~~la~~Aa~~aL~~a~~~~~dId~lI~~ 88 (353)
T PRK12880 61 SDLGKHAANTLLQGLNIDKNSLDALIVV 88 (353)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEE
Confidence 4456889999999999999999998743
No 141
>PRK07204 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=78.06 E-value=1.5 Score=38.02 Aligned_cols=31 Identities=13% Similarity=0.041 Sum_probs=25.0
Q ss_pred HHHHHHHHHHHHHHcCCCCCCccEEEcccCCC
Q psy4744 238 QASLVEFFTNFYQKARVNPGQVDFLEADGSAI 269 (270)
Q Consensus 238 ~~~~~~a~~~al~~agi~~~did~v~~hgtgt 269 (270)
.+-..++.+++|+++|++|+|||++. +++.|
T Consensus 53 ~~la~~Aa~~aL~~ag~~~~dId~li-~~~~~ 83 (329)
T PRK07204 53 SYMGAEAAKKAVEDAKLTLDDIDCII-CASGT 83 (329)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEE-EECCC
Confidence 45568899999999999999999974 44444
No 142
>PRK06147 3-oxoacyl-(acyl carrier protein) synthase; Validated
Probab=77.97 E-value=17 Score=31.90 Aligned_cols=88 Identities=14% Similarity=0.088 Sum_probs=48.2
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCCCeEEEEccCCCCccccccCccccchhhHhhhhhhhHHHHHHHHcCCCC---CCcc-
Q psy4744 53 RCFIEPCFEAILDAGINPKSLAGSNSSVYTNSCISDDESLGCDERLTTNFWLLAHVRCLLANRIAYLFDLKG---PSFT- 128 (270)
Q Consensus 53 ~l~l~a~~~Al~dAg~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl~G---p~~~- 128 (270)
+=...++++||+++|+++.+++ .+.....+..... ..-..-+...|+-.. |...
T Consensus 234 ~gl~~ai~~AL~~agl~~~dId-----~v~ah~~gt~~~d-----------------~~e~~A~~~~f~~~~~~~~~~~~ 291 (348)
T PRK06147 234 DGLTQAIRAALAEAGCGLEDMD-----YRIADLNGEQYRF-----------------KEAALAEMRLFRVRKEFFDLWHP 291 (348)
T ss_pred HHHHHHHHHHHHHcCCCHHHCC-----EEEcCCCCCccch-----------------HHHHHHHHHHhhhccCCCceecc
Confidence 4456788999999999887764 3443333221100 000111223333211 1111
Q ss_pred ---c-cccchhHHHHHHHHHHHHhcCCC--CEEEEeeecc
Q psy4744 129 ---I-DNSWTGGIEVLRQAVQDISEGRV--DTAIVGVSNL 162 (270)
Q Consensus 129 ---v-~~~cas~~~al~~A~~~i~~G~~--d~~lv~g~~~ 162 (270)
+ ..+.++|...+..+..+++.|.. +.+||.+.+.
T Consensus 292 k~~~Gh~~aAaG~~~~~~a~~~~~~g~~~g~~~L~~s~~d 331 (348)
T PRK06147 292 AECIGEIGAAIGPALLGVALAASRKGYGPGPNVLCHLSDD 331 (348)
T ss_pred hHhhcchHHHHHHHHHHHHHHHHHcCcCCCCcEEEEecCC
Confidence 1 12356777778888899999954 6777766655
No 143
>COG0332 FabH 3-oxoacyl-[acyl-carrier-protein]
Probab=77.74 E-value=1.4 Score=38.17 Aligned_cols=26 Identities=19% Similarity=0.300 Sum_probs=23.1
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEc
Q psy4744 239 ASLVEFFTNFYQKARVNPGQVDFLEA 264 (270)
Q Consensus 239 ~~~~~a~~~al~~agi~~~did~v~~ 264 (270)
+--.+|.++||++||++|+|||.|..
T Consensus 54 ~la~~Aa~~AL~~Agi~~~dIDlII~ 79 (323)
T COG0332 54 DLAVEAARKALEDAGISPDDIDLIIV 79 (323)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEE
Confidence 44688999999999999999999875
No 144
>PLN03171 chalcone synthase-like protein; Provisional
Probab=76.63 E-value=1.9 Score=38.75 Aligned_cols=28 Identities=7% Similarity=-0.098 Sum_probs=23.7
Q ss_pred HHHHHHHHHHHcCCCCCCccEEEcccCCC
Q psy4744 241 LVEFFTNFYQKARVNPGQVDFLEADGSAI 269 (270)
Q Consensus 241 ~~~a~~~al~~agi~~~did~v~~hgtgt 269 (270)
..++.+++|+++|++++|||.|. ++|.|
T Consensus 112 a~~Aa~~aL~~ag~~~~dId~li-~~t~t 139 (399)
T PLN03171 112 AAEAAKKAIAEWGRPAADITHLV-VTTNS 139 (399)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEE-EEcCC
Confidence 47899999999999999999987 44544
No 145
>CHL00203 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Provisional
Probab=75.71 E-value=1.9 Score=37.47 Aligned_cols=27 Identities=19% Similarity=0.235 Sum_probs=23.6
Q ss_pred HHHHHHHHHHHHHHcCCCCCCccEEEc
Q psy4744 238 QASLVEFFTNFYQKARVNPGQVDFLEA 264 (270)
Q Consensus 238 ~~~~~~a~~~al~~agi~~~did~v~~ 264 (270)
.+-..++++++|+++|++|+|||+|..
T Consensus 52 ~~la~~A~~~aL~~ag~~~~dId~vi~ 78 (326)
T CHL00203 52 TKLAAEAANKALDKAHMDPLEIDLIIL 78 (326)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEE
Confidence 345689999999999999999999874
No 146
>PRK12404 stage V sporulation protein AD; Provisional
Probab=75.58 E-value=1.9 Score=37.21 Aligned_cols=26 Identities=23% Similarity=0.304 Sum_probs=23.2
Q ss_pred HHHHHHHHHHHHcCCCCCCccEEEcc
Q psy4744 240 SLVEFFTNFYQKARVNPGQVDFLEAD 265 (270)
Q Consensus 240 ~~~~a~~~al~~agi~~~did~v~~h 265 (270)
-+.+|+++||+++||+++|||++...
T Consensus 57 L~~EA~~~AL~kAGI~~~DID~i~vG 82 (334)
T PRK12404 57 LLEEACSRAIEKAKLRKEDIQFFLAG 82 (334)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEE
Confidence 46899999999999999999998763
No 147
>TIGR02845 spore_V_AD stage V sporulation protein AD. Bacillus and Clostridium species contain about 10 % dipicolinic acid (pyridine-2,6-dicarboxylic acid) by weight. This protein family, SpoVAD, belongs to the spoVA operon that is suggested to act in the transport of dipicolinic acid (DPA) from the mother cell, where DPA is synthesized, to the forespore, a process essential to sporulation. Members of this protein family are found, so far, in exactly those species believed capable of endospore formation.
Probab=75.17 E-value=2.5 Score=36.63 Aligned_cols=26 Identities=23% Similarity=0.273 Sum_probs=23.3
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEc
Q psy4744 239 ASLVEFFTNFYQKARVNPGQVDFLEA 264 (270)
Q Consensus 239 ~~~~~a~~~al~~agi~~~did~v~~ 264 (270)
.-..+|+++||++||++++|||++..
T Consensus 52 eLa~eAa~~ALekAGL~~~DID~IIv 77 (327)
T TIGR02845 52 KLMEDAVNLALKKANLKKDDVDFFLA 77 (327)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEE
Confidence 45689999999999999999999865
No 148
>PLN03170 chalcone synthase; Provisional
Probab=75.12 E-value=2.2 Score=38.38 Aligned_cols=23 Identities=4% Similarity=-0.154 Sum_probs=20.5
Q ss_pred HHHHHHHHHHHcCCCCCCccEEE
Q psy4744 241 LVEFFTNFYQKARVNPGQVDFLE 263 (270)
Q Consensus 241 ~~~a~~~al~~agi~~~did~v~ 263 (270)
..+|.++||+++|++++|||.|.
T Consensus 110 a~~Aa~~AL~~ag~~~~dId~lI 132 (401)
T PLN03170 110 GKAAAQKAIKEWGQPKSKITHLV 132 (401)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEE
Confidence 47889999999999999999864
No 149
>PLN03168 chalcone synthase; Provisional
Probab=75.03 E-value=2.2 Score=38.15 Aligned_cols=23 Identities=4% Similarity=-0.064 Sum_probs=21.1
Q ss_pred HHHHHHHHHHHcCCCCCCccEEE
Q psy4744 241 LVEFFTNFYQKARVNPGQVDFLE 263 (270)
Q Consensus 241 ~~~a~~~al~~agi~~~did~v~ 263 (270)
-.+|.++||+++|++++|||.|.
T Consensus 105 a~~Aa~~AL~~ag~~~~dId~lI 127 (389)
T PLN03168 105 AAEAAQKAIKEWGGRKSDITHIV 127 (389)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEE
Confidence 37899999999999999999986
No 150
>PRK06840 hypothetical protein; Validated
Probab=72.51 E-value=3 Score=36.42 Aligned_cols=27 Identities=15% Similarity=0.192 Sum_probs=23.6
Q ss_pred HHHHHHHHHHHHHHcCCCCCCccEEEc
Q psy4744 238 QASLVEFFTNFYQKARVNPGQVDFLEA 264 (270)
Q Consensus 238 ~~~~~~a~~~al~~agi~~~did~v~~ 264 (270)
.+-..++++++|+++|++|+|||++..
T Consensus 54 ~~la~~Aa~~aL~~ag~~~~dId~li~ 80 (339)
T PRK06840 54 SDMAIAAAKPALKQAGVDPAAIDVVIY 80 (339)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEE
Confidence 455689999999999999999999864
No 151
>PRK09258 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=71.47 E-value=3.7 Score=35.74 Aligned_cols=27 Identities=11% Similarity=0.197 Sum_probs=23.7
Q ss_pred HHHHHHHHHHHHHHcCCCCCCccEEEc
Q psy4744 238 QASLVEFFTNFYQKARVNPGQVDFLEA 264 (270)
Q Consensus 238 ~~~~~~a~~~al~~agi~~~did~v~~ 264 (270)
.+-..++++++|+++|+.++|||.|..
T Consensus 62 ~~la~~Aa~~aL~~ag~~~~~Id~li~ 88 (338)
T PRK09258 62 SDGAIAAGRKALAEAGIDPSDIGLLIN 88 (338)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEE
Confidence 455789999999999999999999863
No 152
>PF07451 SpoVAD: Stage V sporulation protein AD (SpoVAD); InterPro: IPR010894 This family contains the bacterial stage V sporulation protein AD (SpoVAD), which is approximately 340 residues long. This is one of six proteins encoded by the spoVA operon, which is transcribed exclusively in the forespore at about the time of dipicolinic acid (DPA) synthesis in the mother cell. The functions of the proteins encoded by the spoVA operon are unknown, but it has been suggested they are involved in DPA transport during sporulation [].; PDB: 3LMA_D 3LM6_A.
Probab=71.14 E-value=3.4 Score=35.32 Aligned_cols=25 Identities=24% Similarity=0.200 Sum_probs=19.5
Q ss_pred HHHHHHHHHHHHcCCCCCCccEEEc
Q psy4744 240 SLVEFFTNFYQKARVNPGQVDFLEA 264 (270)
Q Consensus 240 ~~~~a~~~al~~agi~~~did~v~~ 264 (270)
-+.++++.+|++++++++||||+-+
T Consensus 54 m~~~A~~~al~Ka~l~~~dId~~~a 78 (329)
T PF07451_consen 54 MQKEAVELALKKAGLKKEDIDYLFA 78 (329)
T ss_dssp HHHHHHHHHHHHTT--GGG-SEEEE
T ss_pred HHHHHHHHHHHHcCCCHHHCeEEEe
Confidence 4689999999999999999999864
No 153
>cd00831 CHS_like Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs. PKS generate an array of different products, dependent on the nature of the starter molecule. They share a common chemical strategy, after the starter molecule is loaded onto the active site cysteine, a carboxylative condensation reation extends the polyketide chain. Plant-specific PKS are dimeric iterative PKSs, using coenzyme A esters to deliver substrate to the active site, but they differ in the choice of starter molecule and the number of condensation reactions.
Probab=71.11 E-value=3.4 Score=36.42 Aligned_cols=29 Identities=17% Similarity=0.214 Sum_probs=23.7
Q ss_pred HHHHHHHHHHHHcCCCCCCccEEEcccCCC
Q psy4744 240 SLVEFFTNFYQKARVNPGQVDFLEADGSAI 269 (270)
Q Consensus 240 ~~~~a~~~al~~agi~~~did~v~~hgtgt 269 (270)
-..++.+++|+++|++|+|||.+.. +|.|
T Consensus 88 la~~Aa~~aL~~a~~~~~~Id~li~-~s~~ 116 (361)
T cd00831 88 LAEEAARGALDEAGLRPSDIDHLVV-NTST 116 (361)
T ss_pred HHHHHHHHHHHHhCCCHHHCCEEEE-ECCC
Confidence 3588999999999999999999863 3443
No 154
>PLN03173 chalcone synthase; Provisional
Probab=70.53 E-value=3.3 Score=37.14 Aligned_cols=23 Identities=9% Similarity=-0.093 Sum_probs=20.7
Q ss_pred HHHHHHHHHHHcCCCCCCccEEE
Q psy4744 241 LVEFFTNFYQKARVNPGQVDFLE 263 (270)
Q Consensus 241 ~~~a~~~al~~agi~~~did~v~ 263 (270)
..+|.++||+++|++++|||.|.
T Consensus 106 a~~Aa~~AL~~ag~~~~dId~li 128 (391)
T PLN03173 106 GKEAAAKAIKEWGQPKSKITHLV 128 (391)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEE
Confidence 36889999999999999999875
No 155
>cd00830 KAS_III Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems. It is found in bacteria and plants. Elongation of fatty acids in the type II systems occurs by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. KASIII initiates this process by specifically using acetyl-CoA over acyl-CoA.
Probab=69.99 E-value=3.9 Score=35.16 Aligned_cols=31 Identities=13% Similarity=0.188 Sum_probs=25.0
Q ss_pred HHHHHHHHHHHHHHcCCCCCCccEEEcccCCC
Q psy4744 238 QASLVEFFTNFYQKARVNPGQVDFLEADGSAI 269 (270)
Q Consensus 238 ~~~~~~a~~~al~~agi~~~did~v~~hgtgt 269 (270)
.+-..++++++|+++|++++|||.+. +++.|
T Consensus 51 ~~la~~A~~~al~~ag~~~~~Id~li-~~~~~ 81 (320)
T cd00830 51 SDLAVEAAKKALEDAGIDADDIDLII-VATST 81 (320)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEE-EEcCC
Confidence 45568899999999999999999984 44443
No 156
>PRK04262 hypothetical protein; Provisional
Probab=69.84 E-value=4 Score=35.82 Aligned_cols=31 Identities=23% Similarity=0.295 Sum_probs=25.0
Q ss_pred HHHHHHHHHHHHHHcCCCCCCccEEEcccCCC
Q psy4744 238 QASLVEFFTNFYQKARVNPGQVDFLEADGSAI 269 (270)
Q Consensus 238 ~~~~~~a~~~al~~agi~~~did~v~~hgtgt 269 (270)
.+-..++.+++|+++|++++|||.+.. +|.|
T Consensus 52 ~~la~~Aa~~aL~~ag~~~~dId~li~-~s~~ 82 (347)
T PRK04262 52 ATIAVEAARNALKRAGIDPKEIGAVYV-GSES 82 (347)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEE-EecC
Confidence 455688999999999999999999863 4433
No 157
>PF08392 FAE1_CUT1_RppA: FAE1/Type III polyketide synthase-like protein; InterPro: IPR013601 This domain is found in proteins that are described as 3-ketoacyl-CoA synthases, type III polyketide synthases, fatty acid elongases and fatty acid condensing enzymes, and are found in both prokaryotic and eukaryotic (mainly plant) species. The region contains the active site residues, as well as motifs involved in substrate binding []. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0006633 fatty acid biosynthetic process, 0016020 membrane
Probab=68.79 E-value=4.1 Score=34.68 Aligned_cols=25 Identities=20% Similarity=0.441 Sum_probs=21.7
Q ss_pred HHHHHHHHHHHcCCCCCCccEEEcc
Q psy4744 241 LVEFFTNFYQKARVNPGQVDFLEAD 265 (270)
Q Consensus 241 ~~~a~~~al~~agi~~~did~v~~h 265 (270)
+..+++++|+++|++|+|||++..+
T Consensus 87 ~f~av~~LL~ktgv~p~dIdiLVvn 111 (290)
T PF08392_consen 87 IFGAVDDLLAKTGVKPSDIDILVVN 111 (290)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEE
Confidence 4678999999999999999997643
No 158
>PLN02192 3-ketoacyl-CoA synthase
Probab=68.63 E-value=3.7 Score=37.99 Aligned_cols=25 Identities=16% Similarity=0.352 Sum_probs=22.3
Q ss_pred HHHHHHHHHHHcCCCCCCccEEEcc
Q psy4744 241 LVEFFTNFYQKARVNPGQVDFLEAD 265 (270)
Q Consensus 241 ~~~a~~~al~~agi~~~did~v~~h 265 (270)
...|++++|+++|++|+|||+|...
T Consensus 180 ~~~Aa~~aL~kaGi~p~DIDiLIv~ 204 (511)
T PLN02192 180 MFGAIDQLLAKTSVKPKDIGILIVN 204 (511)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEE
Confidence 4678999999999999999998765
No 159
>PLN00415 3-ketoacyl-CoA synthase
Probab=68.19 E-value=4 Score=37.25 Aligned_cols=29 Identities=14% Similarity=0.358 Sum_probs=24.2
Q ss_pred HHHHHHHHHHHHcCCCCCCccEEEcccCC
Q psy4744 240 SLVEFFTNFYQKARVNPGQVDFLEADGSA 268 (270)
Q Consensus 240 ~~~~a~~~al~~agi~~~did~v~~hgtg 268 (270)
.+..|.+++|+++|++|+|||.|....|+
T Consensus 137 ~i~~A~~~aL~~aGi~p~dID~LIvs~T~ 165 (466)
T PLN00415 137 VIFGALNSLFKKTGIEPREVGIFIVNCSL 165 (466)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEECcC
Confidence 35678899999999999999998766655
No 160
>PLN03169 chalcone synthase family protein; Provisional
Probab=67.62 E-value=3.8 Score=36.68 Aligned_cols=23 Identities=13% Similarity=-0.035 Sum_probs=21.0
Q ss_pred HHHHHHHHHHHcCCCCCCccEEE
Q psy4744 241 LVEFFTNFYQKARVNPGQVDFLE 263 (270)
Q Consensus 241 ~~~a~~~al~~agi~~~did~v~ 263 (270)
..+|.++||+++|++|+|||.+.
T Consensus 110 a~~Aa~~aL~~ag~~~~dId~lI 132 (391)
T PLN03169 110 AVEASLACIKEWGRPVSDITHLV 132 (391)
T ss_pred HHHHHHHHHHHhCCCHHHCCEEE
Confidence 47899999999999999999876
No 161
>PRK06816 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=67.57 E-value=4.2 Score=36.17 Aligned_cols=27 Identities=15% Similarity=0.306 Sum_probs=23.2
Q ss_pred HHHHHHHHHHHHHHcCCCCCCccEEEc
Q psy4744 238 QASLVEFFTNFYQKARVNPGQVDFLEA 264 (270)
Q Consensus 238 ~~~~~~a~~~al~~agi~~~did~v~~ 264 (270)
.+-..++++++|+++|++|+|||.+..
T Consensus 64 ~~La~~A~~~aL~~agi~~~dId~li~ 90 (378)
T PRK06816 64 AQMAAEAIRDLLDDAGFSLGDIELLAC 90 (378)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEE
Confidence 455688999999999999999998753
No 162
>PRK12879 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=67.22 E-value=5.1 Score=34.63 Aligned_cols=26 Identities=8% Similarity=0.161 Sum_probs=23.0
Q ss_pred HHHHHHHHHHHHHHcCCCCCCccEEE
Q psy4744 238 QASLVEFFTNFYQKARVNPGQVDFLE 263 (270)
Q Consensus 238 ~~~~~~a~~~al~~agi~~~did~v~ 263 (270)
.+-..++++++|+++|++++|||++.
T Consensus 54 ~~la~~A~~~al~~ag~~~~~Id~li 79 (325)
T PRK12879 54 SDLAIKAAERALARAGLDAEDIDLII 79 (325)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEE
Confidence 45568999999999999999999976
No 163
>PLN02326 3-oxoacyl-[acyl-carrier-protein] synthase III
Probab=66.30 E-value=4.3 Score=36.14 Aligned_cols=27 Identities=26% Similarity=0.269 Sum_probs=23.3
Q ss_pred HHHHHHHHHHHHHHcCCCCCCccEEEc
Q psy4744 238 QASLVEFFTNFYQKARVNPGQVDFLEA 264 (270)
Q Consensus 238 ~~~~~~a~~~al~~agi~~~did~v~~ 264 (270)
.+-..++++++|+++|++++|||.|..
T Consensus 97 ~~La~~Aa~~aL~~agi~~~dId~li~ 123 (379)
T PLN02326 97 TSLAVEAAKKALEMAGVDPEDVDLVLL 123 (379)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEE
Confidence 445689999999999999999998764
No 164
>PF02803 Thiolase_C: Thiolase, C-terminal domain; InterPro: IPR020617 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2.3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 2WUA_B 4E1L_B 3SVK_A 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2IB8_B 2IBU_A 2IB9_C ....
Probab=65.08 E-value=25 Score=25.92 Aligned_cols=19 Identities=21% Similarity=0.473 Sum_probs=14.4
Q ss_pred HHHHHHHHHHCCCCCCCCC
Q psy4744 56 IEPCFEAILDAGINPKSLA 74 (270)
Q Consensus 56 l~a~~~Al~dAg~~~~~~~ 74 (270)
..|++++|+.+|++.+|+|
T Consensus 25 ~~A~~~al~~ag~~~~did 43 (123)
T PF02803_consen 25 VPAARKALERAGLTPDDID 43 (123)
T ss_dssp HHHHHHHHHHHT--GGGES
T ss_pred HHHHHHHHHHhCCCccccc
Confidence 3588999999999988876
No 165
>PLN02932 3-ketoacyl-CoA synthase
Probab=64.01 E-value=5.2 Score=36.78 Aligned_cols=24 Identities=13% Similarity=0.487 Sum_probs=21.3
Q ss_pred HHHHHHHHHHHcCCCCCCccEEEc
Q psy4744 241 LVEFFTNFYQKARVNPGQVDFLEA 264 (270)
Q Consensus 241 ~~~a~~~al~~agi~~~did~v~~ 264 (270)
..+|++++|+++|++|+|||+|..
T Consensus 152 a~~Aa~~aL~~agi~p~dId~lIv 175 (478)
T PLN02932 152 IIGAVDNLFRNTGISPSDIGILVV 175 (478)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEE
Confidence 477899999999999999999863
No 166
>PLN02577 hydroxymethylglutaryl-CoA synthase
Probab=63.98 E-value=5 Score=36.74 Aligned_cols=31 Identities=23% Similarity=0.337 Sum_probs=25.3
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEcccCCCC
Q psy4744 239 ASLVEFFTNFYQKARVNPGQVDFLEADGSAIK 270 (270)
Q Consensus 239 ~~~~~a~~~al~~agi~~~did~v~~hgtgt~ 270 (270)
..-.+|.+++|+++|++|++||.|. -||.|+
T Consensus 55 tmA~~AA~~aL~~agid~~~Idlli-vaTeT~ 85 (459)
T PLN02577 55 SMSLTVVKSLLEKYNIDPKQIGRLE-VGSETV 85 (459)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEE-EEcCCC
Confidence 4458899999999999999999988 455543
No 167
>PLN02377 3-ketoacyl-CoA synthase
Probab=62.86 E-value=5.9 Score=36.71 Aligned_cols=27 Identities=22% Similarity=0.465 Sum_probs=22.9
Q ss_pred HHHHHHHHHHHcCCCCCCccEEEcccC
Q psy4744 241 LVEFFTNFYQKARVNPGQVDFLEADGS 267 (270)
Q Consensus 241 ~~~a~~~al~~agi~~~did~v~~hgt 267 (270)
...|++++|+++|++|+|||.+...-|
T Consensus 176 ~~~A~~~aL~kaGi~p~dID~LVv~cS 202 (502)
T PLN02377 176 MFGALDNLFANTNVNPKDIGILVVNCS 202 (502)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEECC
Confidence 467899999999999999999876433
No 168
>PRK09052 acetyl-CoA acetyltransferase; Provisional
Probab=62.81 E-value=42 Score=30.17 Aligned_cols=21 Identities=29% Similarity=0.292 Sum_probs=17.8
Q ss_pred HHHHHHHHHHHHCCCCCCCCC
Q psy4744 54 CFIEPCFEAILDAGINPKSLA 74 (270)
Q Consensus 54 l~l~a~~~Al~dAg~~~~~~~ 74 (270)
-...++++||++||++++|++
T Consensus 298 ~~~~A~~~al~~Agi~~~did 318 (399)
T PRK09052 298 GPIEAIPAALKQAGLKQDDLD 318 (399)
T ss_pred hHHHHHHHHHHHcCCCHHHcC
Confidence 346789999999999988876
No 169
>PLN03172 chalcone synthase family protein; Provisional
Probab=62.69 E-value=6.2 Score=35.38 Aligned_cols=23 Identities=9% Similarity=-0.093 Sum_probs=20.6
Q ss_pred HHHHHHHHHHHcCCCCCCccEEE
Q psy4744 241 LVEFFTNFYQKARVNPGQVDFLE 263 (270)
Q Consensus 241 ~~~a~~~al~~agi~~~did~v~ 263 (270)
..+|.++||+++|++++|||+|.
T Consensus 106 a~~Aa~~aL~~ag~~~~dId~ii 128 (393)
T PLN03172 106 GKEAAAKAIKEWGQPKSKITHLV 128 (393)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEE
Confidence 37889999999999999999865
No 170
>PRK09585 anmK anhydro-N-acetylmuramic acid kinase; Reviewed
Probab=61.95 E-value=11 Score=33.50 Aligned_cols=28 Identities=18% Similarity=0.385 Sum_probs=25.5
Q ss_pred HHHHHHHHHHHHcCCCCCCccEEEcccC
Q psy4744 240 SLVEFFTNFYQKARVNPGQVDFLEADGS 267 (270)
Q Consensus 240 ~~~~a~~~al~~agi~~~did~v~~hgt 267 (270)
...+++++.++++++++++||+|=.||-
T Consensus 72 ~~a~av~~~~~~~~l~~~~id~IgsHGQ 99 (365)
T PRK09585 72 LFAEAVNALLAEAGLSPEDIDAIGSHGQ 99 (365)
T ss_pred HHHHHHHHHHHHcCCCccCccEEEeCCc
Confidence 3588999999999999999999999994
No 171
>TIGR00747 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III. Active site residues include Cys112, His244 and Asn274 of E. coli FabH. Cys-112 is the site of acyl group attachment.
Probab=61.44 E-value=8.2 Score=33.23 Aligned_cols=27 Identities=11% Similarity=0.123 Sum_probs=23.5
Q ss_pred HHHHHHHHHHHHHHcCCCCCCccEEEc
Q psy4744 238 QASLVEFFTNFYQKARVNPGQVDFLEA 264 (270)
Q Consensus 238 ~~~~~~a~~~al~~agi~~~did~v~~ 264 (270)
.+-..++++++|+++|++|+|||.+..
T Consensus 52 ~~la~~A~~~al~~agl~~~~Id~~i~ 78 (318)
T TIGR00747 52 STMGFEAAKRAIENAGISKDDIDLIIV 78 (318)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEE
Confidence 455789999999999999999998764
No 172
>PRK09352 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=60.92 E-value=7.9 Score=33.30 Aligned_cols=30 Identities=13% Similarity=0.252 Sum_probs=24.4
Q ss_pred HHHHHHHHHHHHHHcCCCCCCccEEEcccCC
Q psy4744 238 QASLVEFFTNFYQKARVNPGQVDFLEADGSA 268 (270)
Q Consensus 238 ~~~~~~a~~~al~~agi~~~did~v~~hgtg 268 (270)
.+-..++++++|+++|++++|||.+.. ++.
T Consensus 53 ~~la~~A~~~al~~agl~~~~id~vi~-~~~ 82 (319)
T PRK09352 53 SDLATEAAKKALEAAGIDPEDIDLIIV-ATT 82 (319)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEE-EcC
Confidence 445688999999999999999998763 443
No 173
>PF04422 FrhB_FdhB_N: Coenzyme F420 hydrogenase/dehydrogenase, beta subunit N-term; InterPro: IPR007516 Coenzyme F420 hydrogenase (1.12.99.1 from EC) reduces the low-potential two-electron acceptor coenzyme F420. This entry contains the N termini of F420 hydrogenase and dehydrogenase beta subunits [, ]. The N terminus of Methanobacterium formicicum formate dehydrogenase beta chain (1.2.1.2 from EC, P06130 from SWISSPROT) is also represented in this entry []. This region is often found in association with the 4Fe-4S binding domain, fer4 (IPR001450 from INTERPRO), and the C terminus IPR007525 from INTERPRO.
Probab=60.43 E-value=16 Score=24.68 Aligned_cols=33 Identities=21% Similarity=0.120 Sum_probs=28.1
Q ss_pred ccccchhHHHHHHHHHHHHhcCCCCEEEEeeec
Q psy4744 129 IDNSWTGGIEVLRQAVQDISEGRVDTAIVGVSN 161 (270)
Q Consensus 129 v~~~cas~~~al~~A~~~i~~G~~d~~lv~g~~ 161 (270)
|-..++||...-.++..+|..|.+|.||+.+.+
T Consensus 13 ir~~~~sGG~vTaLl~~lLe~g~Vd~vv~~~~~ 45 (82)
T PF04422_consen 13 IREKSQSGGVVTALLAYLLESGLVDGVVVVGRD 45 (82)
T ss_pred hcccCCcHHHHHHHHHHHHHcCCceEEEEEeec
Confidence 445678888888899999999999999999843
No 174
>PRK06065 acetyl-CoA acetyltransferase; Provisional
Probab=59.93 E-value=12 Score=33.63 Aligned_cols=27 Identities=15% Similarity=0.071 Sum_probs=23.5
Q ss_pred HHHHHHHHHHHHHHcCCCCCCccEEEc
Q psy4744 238 QASLVEFFTNFYQKARVNPGQVDFLEA 264 (270)
Q Consensus 238 ~~~~~~a~~~al~~agi~~~did~v~~ 264 (270)
.+-..++++++|+++|++++|||.+..
T Consensus 30 ~~L~~~A~~~Al~dagl~~~dID~~i~ 56 (392)
T PRK06065 30 QELAWEAASKALDEAGLELKDIDCVVI 56 (392)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEE
Confidence 345688999999999999999998865
No 175
>cd00827 init_cond_enzymes "initiating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type III and polyketide synthases, type III, which include chalcone synthase and related enzymes. They are characterized by the utlization of CoA substrate primers, as well as the nature of their active site residues.
Probab=59.70 E-value=7.2 Score=33.58 Aligned_cols=27 Identities=19% Similarity=0.302 Sum_probs=23.7
Q ss_pred HHHHHHHHHHHHHHcCCCCCCccEEEc
Q psy4744 238 QASLVEFFTNFYQKARVNPGQVDFLEA 264 (270)
Q Consensus 238 ~~~~~~a~~~al~~agi~~~did~v~~ 264 (270)
.+-..++++++|+++|++++|||.|..
T Consensus 49 ~~l~~~a~~~aL~~ag~~~~~Id~li~ 75 (324)
T cd00827 49 PTMAVEAARRALERAGIDPDDIGLLIV 75 (324)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEE
Confidence 455789999999999999999999864
No 176
>PF08541 ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ; InterPro: IPR013747 This domain is found on 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 2.3.1.41 from EC, the enzyme responsible for initiating the chain of reactions of the fatty acid synthase in plants and bacteria. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008610 lipid biosynthetic process; PDB: 3IL3_A 1ZOW_C 3GWE_B 3GWA_B 1UB7_B 3LED_B 2EBD_A 1HNJ_A 2EFT_B 1HN9_B ....
Probab=58.90 E-value=18 Score=24.63 Aligned_cols=48 Identities=13% Similarity=-0.036 Sum_probs=25.5
Q ss_pred HHHHHcCCCCCCcc------ccccchhHHHHHHHHHHHHhcCCCCEEEEeeecc
Q psy4744 115 RIAYLFDLKGPSFT------IDNSWTGGIEVLRQAVQDISEGRVDTAIVGVSNL 162 (270)
Q Consensus 115 ~ia~~~gl~Gp~~~------v~~~cas~~~al~~A~~~i~~G~~d~~lv~g~~~ 162 (270)
.+...+|+.-..+. =+++|++...+|..+.+.=+-..-|.+++.+.-.
T Consensus 26 ~~~~~lgi~~~~~~~~~~~~Gn~~sa~~~~~L~~~~~~g~~~~Gd~vl~~~~G~ 79 (90)
T PF08541_consen 26 SIAKRLGIPPERFPDNLAEYGNTGSASIPINLADALEEGRIKPGDRVLLVGFGA 79 (90)
T ss_dssp HHHHHHTS-GGGBE-THHHH-B-GGGHHHHHHHHHHHTTSSCTTEEEEEEEEET
T ss_pred HHHHHcCCcHHHHHHHHhccCcchhhhHHHHHHHHHHcCCCCCCCEEEEEEEEh
Confidence 46677777421111 1346677777777766622222346777766543
No 177
>TIGR01833 HMG-CoA-S_euk 3-hydroxy-3-methylglutaryl-CoA-synthase, eukaryotic clade. Hydroxymethylglutaryl(HMG)-CoA synthase is the first step of isopentenyl pyrophosphate (IPP) biosynthesis via the mevalonate pathway. This pathway is found mainly in eukaryotes, but also in archaea and some bacteria. This model is specific for eukaryotes.
Probab=58.32 E-value=7.3 Score=35.62 Aligned_cols=31 Identities=13% Similarity=0.232 Sum_probs=26.2
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEcccCCCC
Q psy4744 239 ASLVEFFTNFYQKARVNPGQVDFLEADGSAIK 270 (270)
Q Consensus 239 ~~~~~a~~~al~~agi~~~did~v~~hgtgt~ 270 (270)
.....|.+++|++++++|++||.|. +||-|+
T Consensus 52 tma~~AA~~lL~~a~id~~~Id~Li-v~TeS~ 82 (454)
T TIGR01833 52 SLCLTVVSKLMERYNIDYNQIGRLE-VGTETI 82 (454)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEE-EECCCC
Confidence 4458899999999999999999998 477664
No 178
>PRK09051 beta-ketothiolase; Provisional
Probab=57.75 E-value=7 Score=35.04 Aligned_cols=27 Identities=19% Similarity=0.159 Sum_probs=23.9
Q ss_pred HHHHHHHHHHHHHHcCCCCCCccEEEc
Q psy4744 238 QASLVEFFTNFYQKARVNPGQVDFLEA 264 (270)
Q Consensus 238 ~~~~~~a~~~al~~agi~~~did~v~~ 264 (270)
.+-..++++++|+++|++|+|||.|..
T Consensus 28 ~eL~~~A~~~AL~~agi~~~dID~vi~ 54 (394)
T PRK09051 28 TDLGATVVREALARAGVDPDQVGHVVF 54 (394)
T ss_pred HHHHHHHHHHHHHHcCCCHHHcCEEEE
Confidence 667789999999999999999998754
No 179
>PRK07515 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=56.99 E-value=7.8 Score=34.33 Aligned_cols=25 Identities=12% Similarity=-0.015 Sum_probs=21.8
Q ss_pred HHHHHHHHHHHHcCCCCCCccEEEc
Q psy4744 240 SLVEFFTNFYQKARVNPGQVDFLEA 264 (270)
Q Consensus 240 ~~~~a~~~al~~agi~~~did~v~~ 264 (270)
-..+++++||+++|++++|||.+..
T Consensus 98 la~~Aa~~aL~~agl~~~~Id~li~ 122 (372)
T PRK07515 98 MGVAAARQALARAGRTAEDIDAVIV 122 (372)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEE
Confidence 4578999999999999999998763
No 180
>COG0533 QRI7 Metal-dependent proteases with possible chaperone activity [Posttranslational modification, protein turnover, chaperones]
Probab=56.04 E-value=14 Score=32.27 Aligned_cols=30 Identities=13% Similarity=0.263 Sum_probs=24.5
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEE-cccCC
Q psy4744 239 ASLVEFFTNFYQKARVNPGQVDFLE-ADGSA 268 (270)
Q Consensus 239 ~~~~~a~~~al~~agi~~~did~v~-~hgtg 268 (270)
+.+..+++++|++||++++|||.|= +.|+|
T Consensus 52 e~i~~li~~al~eA~~~~~dID~IA~T~gPG 82 (342)
T COG0533 52 ENIPPLIEEALAEAGVSLEDIDAIAVTAGPG 82 (342)
T ss_pred HHHHHHHHHHHHHcCCCcccCCEEEEecCCC
Confidence 4467899999999999999999974 45554
No 181
>PF00195 Chal_sti_synt_N: Chalcone and stilbene synthases, N-terminal domain; InterPro: IPR001099 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2.3.1.74 from EC) and stilbene synthases (STS) (formerly known as resveratrol synthases) are related plant enzymes. CHS is an important enzyme in flavanoid biosynthesis and STS is a key enzyme in stilbene-type phyloalexin biosynthesis. Both enzymes catalyse the addition of three molecules of malonyl-CoA to a starter CoA ester (a typical example is 4-coumaroyl-CoA), producing either a chalcone (with CHS) or stilbene (with STS) []. These enzymes have a conserved cysteine residue, located in the central section of the protein sequence, which is essential for the catalytic activity of both enzymes and probably represents the binding site for the 4-coumaryl-CoA group [].; GO: 0016746 transferase activity, transferring acyl groups, 0009058 biosynthetic process; PDB: 3EUO_B 3EUT_C 3EUQ_D 3E1H_A 3AWK_A 3AWJ_A 2H84_A 3A5S_A 3A5Q_B 3A5R_A ....
Probab=55.84 E-value=8.7 Score=31.57 Aligned_cols=23 Identities=17% Similarity=0.213 Sum_probs=19.6
Q ss_pred HHHHHHHHHHHcCCCCCCccEEE
Q psy4744 241 LVEFFTNFYQKARVNPGQVDFLE 263 (270)
Q Consensus 241 ~~~a~~~al~~agi~~~did~v~ 263 (270)
..++.++||+++|++++||+.+.
T Consensus 104 ~~~Aa~~AL~~~g~~~~dIthlv 126 (226)
T PF00195_consen 104 AEEAARKALAEAGLDPSDITHLV 126 (226)
T ss_dssp HHHHHHHHHHHHTS-GGGECEEE
T ss_pred HHHHHHHHHHHcCCCCcccceEE
Confidence 37888999999999999999965
No 182
>PRK06954 acetyl-CoA acetyltransferase; Provisional
Probab=55.39 E-value=15 Score=32.95 Aligned_cols=26 Identities=15% Similarity=0.137 Sum_probs=23.0
Q ss_pred HHHHHHHHHHHHHHcCCCCCCccEEE
Q psy4744 238 QASLVEFFTNFYQKARVNPGQVDFLE 263 (270)
Q Consensus 238 ~~~~~~a~~~al~~agi~~~did~v~ 263 (270)
.+-..++++++|+++||+|+|||+|.
T Consensus 32 ~eL~~~a~~~aL~~Agi~~~dID~vi 57 (397)
T PRK06954 32 PQLGAAAIAAAVERAGLKPEQIDEVV 57 (397)
T ss_pred HHHHHHHHHHHHHHcCCCHHHcCEEE
Confidence 45568999999999999999999875
No 183
>PRK06445 acetyl-CoA acetyltransferase; Provisional
Probab=55.24 E-value=7.5 Score=34.85 Aligned_cols=26 Identities=12% Similarity=0.282 Sum_probs=22.8
Q ss_pred HHHHHHHHHHHHHHcCCCCCCccEEE
Q psy4744 238 QASLVEFFTNFYQKARVNPGQVDFLE 263 (270)
Q Consensus 238 ~~~~~~a~~~al~~agi~~~did~v~ 263 (270)
.+-..++++++|+++|++|+|||.|.
T Consensus 33 ~~L~~~a~~~AL~~agl~~~dID~vi 58 (394)
T PRK06445 33 EELAAMLINRLIEKTGIKPEEIDDII 58 (394)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCeeE
Confidence 45568999999999999999999875
No 184
>PRK08257 acetyl-CoA acetyltransferase; Validated
Probab=55.08 E-value=38 Score=31.48 Aligned_cols=78 Identities=13% Similarity=0.100 Sum_probs=47.3
Q ss_pred HHHHHHHHHHCCCCCCCCCCCCeEEEEccCCCCccccccCccccchhhHhhhhhhhHHHHHHHHcCCCCC---Ccccccc
Q psy4744 56 IEPCFEAILDAGINPKSLAGSNSSVYTNSCISDDESLGCDERLTTNFWLLAHVRCLLANRIAYLFDLKGP---SFTIDNS 132 (270)
Q Consensus 56 l~a~~~Al~dAg~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl~Gp---~~~v~~~ 132 (270)
..++.+|++.||+.+++++-. -+|-. | +...-.....|||..+ .++++.+
T Consensus 295 ~~aa~~a~~~AGi~~~Did~~--elydc------------------F-------~~~~~~~~E~LGl~~~g~~pvN~sGG 347 (498)
T PRK08257 295 RAAGRRALALAGLGIDDIDAF--DLYSC------------------F-------PSAVQVAARELGLDLDDPRPLTVTGG 347 (498)
T ss_pred HHHHHHHHHHhCCCHHHCCEE--EeccC------------------C-------HHHHHHHHHHcCcCCCCCCCcCCCcC
Confidence 358899999999998887621 11100 0 1111123345666433 3444332
Q ss_pred --------chhHHHHHHHHHHHHhcCCCCEEEEeee
Q psy4744 133 --------WTGGIEVLRQAVQDISEGRVDTAIVGVS 160 (270)
Q Consensus 133 --------cas~~~al~~A~~~i~~G~~d~~lv~g~ 160 (270)
.++++..|..+++.|+.......|+.+.
T Consensus 348 l~s~G~P~~a~g~~~i~E~v~QLRg~~~~~gLv~~~ 383 (498)
T PRK08257 348 LPFFGGPGNNYVTHAIAEMVERLRANPGRRGLVTAN 383 (498)
T ss_pred hhhcCCchhhHHHHHHHHHHHHHhhcCCCEEEEECC
Confidence 3557778888999999766788887654
No 185
>PRK13359 beta-ketoadipyl CoA thiolase; Provisional
Probab=54.74 E-value=82 Score=28.37 Aligned_cols=20 Identities=5% Similarity=0.042 Sum_probs=17.1
Q ss_pred HHHHHHHHHHCCCCCCCCCC
Q psy4744 56 IEPCFEAILDAGINPKSLAG 75 (270)
Q Consensus 56 l~a~~~Al~dAg~~~~~~~~ 75 (270)
..++++||++||++++|++-
T Consensus 299 ~~A~~~al~~AGl~~~DID~ 318 (400)
T PRK13359 299 APATQKLLARLGMTLDQFDV 318 (400)
T ss_pred HHHHHHHHHHhCCCHHHcCc
Confidence 57889999999999888763
No 186
>COG3360 Uncharacterized conserved protein [Function unknown]
Probab=54.67 E-value=8.6 Score=24.84 Aligned_cols=27 Identities=19% Similarity=0.234 Sum_probs=23.2
Q ss_pred HHHHHHHHHHHHHHcCCCCCCccEEEc
Q psy4744 238 QASLVEFFTNFYQKARVNPGQVDFLEA 264 (270)
Q Consensus 238 ~~~~~~a~~~al~~agi~~~did~v~~ 264 (270)
+++...+++.|+++|.-+.++|+++|.
T Consensus 16 p~S~d~Ai~~Ai~RA~~t~~~l~wfeV 42 (71)
T COG3360 16 PTSIDAAIANAIARAADTLDNLDWFEV 42 (71)
T ss_pred CccHHHHHHHHHHHHHhhhhcceEEEE
Confidence 456788999999999999999999875
No 187
>PRK05790 putative acyltransferase; Provisional
Probab=54.62 E-value=73 Score=28.47 Aligned_cols=20 Identities=20% Similarity=0.144 Sum_probs=17.4
Q ss_pred HHHHHHHHHHHCCCCCCCCC
Q psy4744 55 FIEPCFEAILDAGINPKSLA 74 (270)
Q Consensus 55 ~l~a~~~Al~dAg~~~~~~~ 74 (270)
...++++|+++||++++|++
T Consensus 293 ~~~a~~~a~~~Agi~~~did 312 (393)
T PRK05790 293 PVPAIRKALEKAGWSLADLD 312 (393)
T ss_pred HHHHHHHHHHHcCCCHHHCC
Confidence 45789999999999988877
No 188
>TIGR01930 AcCoA-C-Actrans acetyl-CoA acetyltransferases. This model represents a large family of enzymes which catalyze the thiolysis of a linear fatty acid CoA (or acetoacetyl-CoA) using a second CoA molecule to produce acetyl-CoA and a CoA-ester product two carbons shorter (or, alternatively, the condensation of two molecules of acetyl-CoA to produce acetoacetyl-CoA and CoA). This enzyme is also known as "thiolase", "3-ketoacyl-CoA thiolase", "beta-ketothiolase" and "Fatty oxidation complex beta subunit". When catalyzing the degradative reaction on fatty acids the corresponding EC number is 2.3.1.16. The condensation reaction corresponds to 2.3.1.9. Note that the enzymes which catalyze the condensation are generally not involved in fatty acid biosynthesis, which is carried out by a decarboxylating condensation of acetyl and malonyl esters of acyl carrier proteins. Rather, this activity may produce acetoacetyl-CoA for pathways such as IPP biosynthesis in the absence of sufficient fatt
Probab=54.41 E-value=41 Score=30.01 Aligned_cols=78 Identities=8% Similarity=0.097 Sum_probs=44.7
Q ss_pred HHHHHHHHHHCCCCCCCCCCCCeEEEEccCCCCccccccCccccchhhHhhhhhhhHHHHHHHHcCCCCCCcccccc---
Q psy4744 56 IEPCFEAILDAGINPKSLAGSNSSVYTNSCISDDESLGCDERLTTNFWLLAHVRCLLANRIAYLFDLKGPSFTIDNS--- 132 (270)
Q Consensus 56 l~a~~~Al~dAg~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl~Gp~~~v~~~--- 132 (270)
..++++|+++||+.++|++-..+ + ..+. ...-.....||+....++++.+
T Consensus 289 ~~a~~~a~~~Agi~~~did~~e~----------~----------d~fa-------~~~~~~~e~lG~~~~pvn~~GG~l~ 341 (386)
T TIGR01930 289 VPAIPKALKKAGLSISDIDLFEI----------N----------EAFA-------AQVLACIKELGLDLEKVNVNGGAIA 341 (386)
T ss_pred HHHHHHHHHHcCCCHHHCCeeeh----------c----------chhH-------HHHHHHHHHhCCChhhcCCCCChHh
Confidence 57999999999999888763110 0 0000 0111122345552112233322
Q ss_pred -----chhHHHHHHHHHHHHhcCCCCEEEEeee
Q psy4744 133 -----WTGGIEVLRQAVQDISEGRVDTAIVGVS 160 (270)
Q Consensus 133 -----cas~~~al~~A~~~i~~G~~d~~lv~g~ 160 (270)
.++|+..+..++..|+....++.|+-+.
T Consensus 342 ~Ghp~gasG~~~~~e~~~qL~g~~~~~gl~~~~ 374 (386)
T TIGR01930 342 LGHPLGASGARIVTTLLHELKRRGGRYGLATIC 374 (386)
T ss_pred hCCcHHHHHHHHHHHHHHHHHhcCCCEEEEEEe
Confidence 4668888889999998766777776433
No 189
>PRK06158 thiolase; Provisional
Probab=52.83 E-value=9.5 Score=34.06 Aligned_cols=45 Identities=16% Similarity=-0.013 Sum_probs=31.1
Q ss_pred ceEeEEEeccCCCCCCCcCCCHHHHHHHHHHHHHHcCCCCCCccEEEc
Q psy4744 217 EVLHAESRFYGSLERPFVGFNQASLVEFFTNFYQKARVNPGQVDFLEA 264 (270)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~agi~~~did~v~~ 264 (270)
.+++.....++.. . .....+-..+++++||++|||+++|||.|..
T Consensus 11 aIvG~g~t~~~~~-~--~~t~~eL~~eA~~~Al~dAgl~~~dID~iv~ 55 (384)
T PRK06158 11 AIVGAATAGLGEA-P--GLSAMELLAQAAHRALADAGLTMADVDGLFT 55 (384)
T ss_pred EEEEeeeccceeC-C--CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEE
Confidence 4455554444432 1 1223566789999999999999999998764
No 190
>KOG2708|consensus
Probab=50.59 E-value=19 Score=29.68 Aligned_cols=28 Identities=14% Similarity=0.351 Sum_probs=22.8
Q ss_pred HHHHHHHHHHHcCCCCCCccEEE-cccCC
Q psy4744 241 LVEFFTNFYQKARVNPGQVDFLE-ADGSA 268 (270)
Q Consensus 241 ~~~a~~~al~~agi~~~did~v~-~hgtg 268 (270)
....++++|++++++++|||+|= +-|+|
T Consensus 53 il~Lv~~al~ea~v~~~diD~icyTKGPG 81 (336)
T KOG2708|consen 53 ILGLVKQALEEAGVTSDDIDCICYTKGPG 81 (336)
T ss_pred HHHHHHHHHHHcCCChhhCCEEEEcCCCC
Confidence 56788999999999999999963 45544
No 191
>PLN02644 acetyl-CoA C-acetyltransferase
Probab=49.98 E-value=72 Score=28.58 Aligned_cols=19 Identities=16% Similarity=0.200 Sum_probs=16.1
Q ss_pred HHHHHHHHHHCCCCCCCCC
Q psy4744 56 IEPCFEAILDAGINPKSLA 74 (270)
Q Consensus 56 l~a~~~Al~dAg~~~~~~~ 74 (270)
..++++|++++|+++++++
T Consensus 294 ~~a~~~al~~Agi~~~Did 312 (394)
T PLN02644 294 ALAIPKALKHAGLEASQVD 312 (394)
T ss_pred HHHHHHHHHHcCCCHHHCC
Confidence 3588999999999988876
No 192
>KOG2707|consensus
Probab=49.92 E-value=20 Score=31.48 Aligned_cols=25 Identities=12% Similarity=0.299 Sum_probs=22.2
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEE
Q psy4744 239 ASLVEFFTNFYQKARVNPGQVDFLE 263 (270)
Q Consensus 239 ~~~~~a~~~al~~agi~~~did~v~ 263 (270)
..+.+.++++|+.||++|.|+|.|-
T Consensus 84 ~ni~~~iqral~aa~~~p~dldaIA 108 (405)
T KOG2707|consen 84 ENIPRLIQRALDAAGLSPKDLDAIA 108 (405)
T ss_pred HHHHHHHHHHHHHcCCCcccceeEE
Confidence 4468899999999999999999874
No 193
>PLN02854 3-ketoacyl-CoA synthase
Probab=49.81 E-value=13 Score=34.62 Aligned_cols=25 Identities=16% Similarity=0.432 Sum_probs=21.7
Q ss_pred HHHHHHHHHHHcCCCCCCccEEEcc
Q psy4744 241 LVEFFTNFYQKARVNPGQVDFLEAD 265 (270)
Q Consensus 241 ~~~a~~~al~~agi~~~did~v~~h 265 (270)
+..+++++|+++|++|+|||+|...
T Consensus 192 ~~~~~~~lL~kaGi~p~dID~LIv~ 216 (521)
T PLN02854 192 MFGALDSLFSKTGVKPRDIGILIVN 216 (521)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEE
Confidence 3568889999999999999998864
No 194
>PRK07108 acetyl-CoA acetyltransferase; Provisional
Probab=49.70 E-value=10 Score=34.02 Aligned_cols=28 Identities=11% Similarity=0.153 Sum_probs=24.1
Q ss_pred CHHHHHHHHHHHHHHcCCCCCCccEEEc
Q psy4744 237 NQASLVEFFTNFYQKARVNPGQVDFLEA 264 (270)
Q Consensus 237 ~~~~~~~a~~~al~~agi~~~did~v~~ 264 (270)
..+-..++++++|+++|++|+|||.|..
T Consensus 27 ~~dL~~~A~~~aL~~agi~~~~ID~vi~ 54 (392)
T PRK07108 27 GATLGGHVVQHAVERAKLDPAEVEDVIM 54 (392)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCcEEE
Confidence 3566789999999999999999998654
No 195
>PRK06690 acetyl-CoA acetyltransferase; Provisional
Probab=49.49 E-value=81 Score=27.97 Aligned_cols=21 Identities=5% Similarity=-0.007 Sum_probs=17.2
Q ss_pred HHHHHHHHHHHHCCCCCCCCC
Q psy4744 54 CFIEPCFEAILDAGINPKSLA 74 (270)
Q Consensus 54 l~l~a~~~Al~dAg~~~~~~~ 74 (270)
-...+++++|+++|+++++++
T Consensus 259 ~~~~a~~~al~~Agl~~~Did 279 (361)
T PRK06690 259 GPIFAVNKLLNEMNMKVEDID 279 (361)
T ss_pred HHHHHHHHHHHHcCCCHHHcC
Confidence 345688999999999888876
No 196
>PF09663 Amido_AtzD_TrzD: Amidohydrolase ring-opening protein (Amido_AtzD_TrzD); InterPro: IPR014086 Members of this family are ring-opening amidohydrolases, including cyanuric acid amidohydrolase (3.5.2.15 from EC) (AtzD and TrzD) and barbiturase. Note that barbiturase does not act as defined for 3.5.2.1 from EC (barbiturate + water = malonate + urea) but rather catalyses the ring opening of barbiturase acid to ureidomalonic acid [].; GO: 0016812 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
Probab=49.40 E-value=18 Score=31.51 Aligned_cols=29 Identities=14% Similarity=0.281 Sum_probs=24.7
Q ss_pred HHHHHHHHHHHHHHcCC-CCCCccEEEccc
Q psy4744 238 QASLVEFFTNFYQKARV-NPGQVDFLEADG 266 (270)
Q Consensus 238 ~~~~~~a~~~al~~agi-~~~did~v~~hg 266 (270)
.+...++++++|.+||| +|.|+-||+.-.
T Consensus 131 V~~vA~aV~~aM~~AGI~dpaDVH~VQvKc 160 (365)
T PF09663_consen 131 VEEVAAAVRAAMADAGITDPADVHFVQVKC 160 (365)
T ss_pred HHHHHHHHHHHHHHcCCCChhheeeEEecC
Confidence 35568899999999999 899999998643
No 197
>PRK06205 acetyl-CoA acetyltransferase; Provisional
Probab=49.26 E-value=87 Score=28.19 Aligned_cols=20 Identities=15% Similarity=0.220 Sum_probs=17.2
Q ss_pred HHHHHHHHHHHCCCCCCCCC
Q psy4744 55 FIEPCFEAILDAGINPKSLA 74 (270)
Q Consensus 55 ~l~a~~~Al~dAg~~~~~~~ 74 (270)
...++++||++||++++|++
T Consensus 300 ~~~a~~~al~~Agl~~~Did 319 (404)
T PRK06205 300 PVPATEKALARAGLTLDDID 319 (404)
T ss_pred HHHHHHHHHHHcCCCHHHCC
Confidence 35789999999999988877
No 198
>PRK08170 acetyl-CoA acetyltransferase; Provisional
Probab=48.82 E-value=10 Score=34.40 Aligned_cols=27 Identities=11% Similarity=0.066 Sum_probs=23.8
Q ss_pred HHHHHHHHHHHHHHcCCCCCCccEEEc
Q psy4744 238 QASLVEFFTNFYQKARVNPGQVDFLEA 264 (270)
Q Consensus 238 ~~~~~~a~~~al~~agi~~~did~v~~ 264 (270)
.+-..++++++|+++|++++|||.|..
T Consensus 28 ~~L~~~A~~~Al~dAgl~~~dID~vi~ 54 (426)
T PRK08170 28 SDLAVAAGRALLNRQPFAPDDLDEVIL 54 (426)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEE
Confidence 566789999999999999999998654
No 199
>PRK06157 acetyl-CoA acetyltransferase; Validated
Probab=48.79 E-value=11 Score=33.82 Aligned_cols=27 Identities=22% Similarity=0.297 Sum_probs=23.8
Q ss_pred CHHHHHHHHHHHHHHcCCCCCCccEEE
Q psy4744 237 NQASLVEFFTNFYQKARVNPGQVDFLE 263 (270)
Q Consensus 237 ~~~~~~~a~~~al~~agi~~~did~v~ 263 (270)
..+-..++++++|+++||+++|||.|.
T Consensus 27 ~~~L~~ea~~~AL~dagl~~~dID~v~ 53 (398)
T PRK06157 27 AEDLMVEAFLEALADAGIEPKDIDAAW 53 (398)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEE
Confidence 367789999999999999999999763
No 200
>PRK05656 acetyl-CoA acetyltransferase; Provisional
Probab=48.26 E-value=1.1e+02 Score=27.42 Aligned_cols=20 Identities=15% Similarity=0.096 Sum_probs=17.5
Q ss_pred HHHHHHHHHHHCCCCCCCCC
Q psy4744 55 FIEPCFEAILDAGINPKSLA 74 (270)
Q Consensus 55 ~l~a~~~Al~dAg~~~~~~~ 74 (270)
...++++||+++|++++|++
T Consensus 293 ~~~a~~~al~~agl~~~dId 312 (393)
T PRK05656 293 PVSATRRCLDKAGWSLAELD 312 (393)
T ss_pred HHHHHHHHHHHcCCCHHHCC
Confidence 35799999999999998877
No 201
>PF14804 Jag_N: Jag N-terminus; PDB: 3GKU_B.
Probab=46.95 E-value=16 Score=22.38 Aligned_cols=23 Identities=9% Similarity=0.174 Sum_probs=18.3
Q ss_pred HHHHHHHHHHHHcCCCCCCccEE
Q psy4744 240 SLVEFFTNFYQKARVNPGQVDFL 262 (270)
Q Consensus 240 ~~~~a~~~al~~agi~~~did~v 262 (270)
.+.+|++.|+++-|++.++++|=
T Consensus 6 t~eeAi~~A~~~l~~~~~~~~~e 28 (52)
T PF14804_consen 6 TVEEAIEKALKELGVPREELEYE 28 (52)
T ss_dssp SHHHHHHHHHHHTT--GGGEEEE
T ss_pred CHHHHHHHHHHHhCCChHHEEEE
Confidence 36889999999999999999883
No 202
>cd00751 thiolase Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=46.33 E-value=96 Score=27.62 Aligned_cols=20 Identities=15% Similarity=0.197 Sum_probs=17.2
Q ss_pred HHHHHHHHHHHCCCCCCCCC
Q psy4744 55 FIEPCFEAILDAGINPKSLA 74 (270)
Q Consensus 55 ~l~a~~~Al~dAg~~~~~~~ 74 (270)
...++++|+++||+++++++
T Consensus 287 ~~~a~~~a~~~Agi~~~did 306 (386)
T cd00751 287 PVPAIPKALKRAGLTLDDID 306 (386)
T ss_pred HHHHHHHHHHHcCCCHHHcC
Confidence 35789999999999988876
No 203
>PRK08242 acetyl-CoA acetyltransferase; Validated
Probab=44.19 E-value=15 Score=33.07 Aligned_cols=27 Identities=7% Similarity=0.085 Sum_probs=23.0
Q ss_pred HHHHHHHHHHHHHHcCCCCCCccEEEc
Q psy4744 238 QASLVEFFTNFYQKARVNPGQVDFLEA 264 (270)
Q Consensus 238 ~~~~~~a~~~al~~agi~~~did~v~~ 264 (270)
.+-..++++++|+++||+|+|||.|..
T Consensus 29 ~dLa~~A~~~al~~agi~p~~ID~vi~ 55 (402)
T PRK08242 29 VRLAAGLLEALRDRNGLDTAAVDDVVL 55 (402)
T ss_pred HHHHHHHHHHHHHHcCCCHHHcCEEEE
Confidence 445677899999999999999999764
No 204
>PRK09050 beta-ketoadipyl CoA thiolase; Validated
Probab=44.05 E-value=85 Score=28.25 Aligned_cols=21 Identities=5% Similarity=-0.029 Sum_probs=17.5
Q ss_pred HHHHHHHHHHHCCCCCCCCCC
Q psy4744 55 FIEPCFEAILDAGINPKSLAG 75 (270)
Q Consensus 55 ~l~a~~~Al~dAg~~~~~~~~ 75 (270)
...++++||++||++++|++-
T Consensus 299 ~~~a~~~al~~Agl~~~DId~ 319 (401)
T PRK09050 299 PAPATRKLLARLGLTIDQFDV 319 (401)
T ss_pred HHHHHHHHHHHcCCCHHHCCc
Confidence 356889999999999888873
No 205
>PF03702 UPF0075: Uncharacterised protein family (UPF0075); InterPro: IPR005338 Anhydro-N-acetylmuramic acid kinase catalyzes the specific phosphorylation of 1,6-anhydro-N-acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. It is also required for the utilisation of anhMurNAc, either imported from the medium, or derived from its own cell wall murein, and in so doing plays a role in cell wall recycling [, ]. ; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0006040 amino sugar metabolic process, 0009254 peptidoglycan turnover; PDB: 3QBX_B 3QBW_A 3CQY_B.
Probab=43.27 E-value=22 Score=31.52 Aligned_cols=26 Identities=19% Similarity=0.603 Sum_probs=20.8
Q ss_pred HHHHHHHHHHHcCCCCCCccEEEccc
Q psy4744 241 LVEFFTNFYQKARVNPGQVDFLEADG 266 (270)
Q Consensus 241 ~~~a~~~al~~agi~~~did~v~~hg 266 (270)
..+++.+.++++++++++||+|=.||
T Consensus 70 ~a~av~~~l~~~~i~~~~I~~IgsHG 95 (364)
T PF03702_consen 70 FADAVNQFLKKNGISPSDIDLIGSHG 95 (364)
T ss_dssp HHHHHHHHHHHCT--GGGEEEEEE--
T ss_pred HHHHHHHHHHHcCCCcccccEEEeCC
Confidence 57899999999999999999999998
No 206
>PRK13410 molecular chaperone DnaK; Provisional
Probab=43.14 E-value=26 Score=33.91 Aligned_cols=31 Identities=16% Similarity=0.261 Sum_probs=27.1
Q ss_pred HHHHHHHHHHHHcCCCCCCccEEEcccCCCC
Q psy4744 240 SLVEFFTNFYQKARVNPGQVDFLEADGSAIK 270 (270)
Q Consensus 240 ~~~~a~~~al~~agi~~~did~v~~hgtgt~ 270 (270)
...+.++++|+++|++++||+.|.+.|-+|+
T Consensus 310 r~~~~i~~~L~~ag~~~~dId~VvLVGGssR 340 (668)
T PRK13410 310 RLLRPVKRALKDAGLSPEDIDEVVLVGGSTR 340 (668)
T ss_pred HHHHHHHHHHHHcCCChhhCcEEEEECCccc
Confidence 3567789999999999999999999998774
No 207
>PRK08963 fadI 3-ketoacyl-CoA thiolase; Reviewed
Probab=42.88 E-value=36 Score=30.92 Aligned_cols=27 Identities=7% Similarity=0.095 Sum_probs=22.8
Q ss_pred HHHHHHHHHHHHHHcCCCCCCccEEEc
Q psy4744 238 QASLVEFFTNFYQKARVNPGQVDFLEA 264 (270)
Q Consensus 238 ~~~~~~a~~~al~~agi~~~did~v~~ 264 (270)
.+-..++++++|+++||+|++||.|..
T Consensus 30 ~eL~~~a~~~al~~agl~~~~ID~vi~ 56 (428)
T PRK08963 30 VDLGKMVVGELLARSEIDPELIEQLVF 56 (428)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEE
Confidence 344589999999999999999998753
No 208
>TIGR02430 pcaF beta-ketoadipyl CoA thiolase. Members of this family are designated beta-ketoadipyl CoA thiolase, an enzyme that acts at the end of pathways for the degradation of protocatechuate (from benzoate and related compounds) and of phenylacetic acid.
Probab=42.81 E-value=85 Score=28.26 Aligned_cols=21 Identities=10% Similarity=0.105 Sum_probs=17.2
Q ss_pred HHHHHHHHHHHCCCCCCCCCC
Q psy4744 55 FIEPCFEAILDAGINPKSLAG 75 (270)
Q Consensus 55 ~l~a~~~Al~dAg~~~~~~~~ 75 (270)
...++++||++||++++|++-
T Consensus 298 ~~~a~~~al~~Agl~~~DID~ 318 (400)
T TIGR02430 298 PVPATQKLLARAGLSIDQFDV 318 (400)
T ss_pred HHHHHHHHHHHhCCCHHHCCC
Confidence 356889999999999888773
No 209
>TIGR02714 amido_AtzD_TrzD ring-opening amidohydrolases. Members of this family are are ring-opening amidohydrolases, including cyanuric acid amidohydrolase (EC 3.5.2.15) (AtzD and TrzD) and barbiturase. Note that barbiturase does not act as defined for EC 3.5.2.1 (barbiturate + water = malonate + urea) but rather catalyzes the ring-opening of barbituric acid to ureidomalonic acid (see Soong, et al., PubMed:11485332).
Probab=42.65 E-value=26 Score=30.40 Aligned_cols=28 Identities=14% Similarity=0.310 Sum_probs=24.1
Q ss_pred HHHHHHHHHHHHHcCC-CCCCccEEEccc
Q psy4744 239 ASLVEFFTNFYQKARV-NPGQVDFLEADG 266 (270)
Q Consensus 239 ~~~~~a~~~al~~agi-~~~did~v~~hg 266 (270)
+...+++++++.+||| +|.|+-||+.-.
T Consensus 133 ~~vA~aV~~AM~~AGI~dpaDVH~VQvKc 161 (366)
T TIGR02714 133 TETAAAVKRAMRDAGIADPADVHFVQVKC 161 (366)
T ss_pred HHHHHHHHHHHHHcCCCChhHeeEEEecC
Confidence 4468899999999999 799999998654
No 210
>TIGR01835 HMG-CoA-S_prok 3-hydroxy-3-methylglutaryl CoA synthase, prokaryotic clade. This clade of hydroxymethylglutaryl-CoA (HMG-CoA) synthases is found in a limited spectrum of mostly gram-positive bacteria which make isopentenyl pyrophosphate (IPP) via the mevalonate pathway. This pathway is found primarily in eukaryotes and archaea, but the bacterial homologs are distinct, having aparrently diverged after being laterally transferred from an early eukaryote. HMG-CoA synthase is the first step in the pathway and joins acetyl-CoA with acetoacetyl-CoA with the release of one molecule of CoA. The Borellia sequence may have resulted from a separate lateral transfer event.
Probab=42.44 E-value=13 Score=33.08 Aligned_cols=28 Identities=7% Similarity=0.116 Sum_probs=22.5
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEcccCCC
Q psy4744 239 ASLVEFFTNFYQKARVNPGQVDFLEADGSAI 269 (270)
Q Consensus 239 ~~~~~a~~~al~~agi~~~did~v~~hgtgt 269 (270)
+-..+|.+++|+++ +++|||.+. +||.|
T Consensus 51 ~la~~Aa~~aL~~a--~~~~Id~li-~~t~s 78 (379)
T TIGR01835 51 TMAASAAKPILDRN--DKQKIDMVI-FGTES 78 (379)
T ss_pred HHHHHHHHHHHHhC--CHhhCCEEE-EEeCC
Confidence 44688999999998 899999987 55554
No 211
>PF03990 DUF348: Domain of unknown function (DUF348) ; InterPro: IPR007137 This domain normally occurs as tandem repeats; however it is found as a single copy in the Saccharomyces cerevisiae (Baker's yeast) DNA-binding nuclear protein YCR593 (P25357 from SWISSPROT).
Probab=41.36 E-value=37 Score=19.67 Aligned_cols=22 Identities=9% Similarity=0.140 Sum_probs=19.0
Q ss_pred HHHHHHHHcCCCCCCccEEEcc
Q psy4744 244 FFTNFYQKARVNPGQVDFLEAD 265 (270)
Q Consensus 244 a~~~al~~agi~~~did~v~~h 265 (270)
.+..+|++.||...+-|.|++.
T Consensus 19 tV~~~L~~~gI~l~~~D~v~p~ 40 (43)
T PF03990_consen 19 TVGDALKELGITLGEEDKVSPS 40 (43)
T ss_pred CHHHHHHhCCCCCCCCCEEecC
Confidence 4788999999999999998864
No 212
>PLN02287 3-ketoacyl-CoA thiolase
Probab=40.97 E-value=17 Score=33.23 Aligned_cols=26 Identities=19% Similarity=0.293 Sum_probs=22.9
Q ss_pred HHHHHHHHHHHHHHcCCCCCCccEEE
Q psy4744 238 QASLVEFFTNFYQKARVNPGQVDFLE 263 (270)
Q Consensus 238 ~~~~~~a~~~al~~agi~~~did~v~ 263 (270)
.+-..++++++|+++|++++|||.|.
T Consensus 72 ~eLa~eA~~~AL~dAgl~~~dID~vv 97 (452)
T PLN02287 72 DDLLAPVLKAVVEKTGLNPSEVGDIV 97 (452)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEE
Confidence 45568999999999999999999875
No 213
>PRK06365 acetyl-CoA acetyltransferase; Provisional
Probab=40.68 E-value=17 Score=32.99 Aligned_cols=26 Identities=15% Similarity=0.091 Sum_probs=22.8
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEc
Q psy4744 239 ASLVEFFTNFYQKARVNPGQVDFLEA 264 (270)
Q Consensus 239 ~~~~~a~~~al~~agi~~~did~v~~ 264 (270)
+-..+++++||+++|++++|||.|..
T Consensus 39 eL~~eA~~~Al~dagl~~~dID~vv~ 64 (430)
T PRK06365 39 ERVKKAFDYAMNDAGLTLADIDGSVA 64 (430)
T ss_pred HHHHHHHHHHHHHcCCCHHHcCEEEE
Confidence 55689999999999999999998754
No 214
>PRK09268 acetyl-CoA acetyltransferase; Provisional
Probab=39.80 E-value=44 Score=30.36 Aligned_cols=27 Identities=11% Similarity=0.103 Sum_probs=23.2
Q ss_pred HHHHHHHHHHHHHHcCCCCCCccEEEc
Q psy4744 238 QASLVEFFTNFYQKARVNPGQVDFLEA 264 (270)
Q Consensus 238 ~~~~~~a~~~al~~agi~~~did~v~~ 264 (270)
.+-..++++++|+++|++++|||.+..
T Consensus 32 ~eL~~~a~~~al~~agl~~~~Id~vv~ 58 (427)
T PRK09268 32 QDMLTAALDGLVDRFGLQGERLGEVVA 58 (427)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEE
Confidence 455689999999999999999998754
No 215
>PRK06633 acetyl-CoA acetyltransferase; Provisional
Probab=39.47 E-value=20 Score=32.20 Aligned_cols=29 Identities=10% Similarity=0.200 Sum_probs=24.7
Q ss_pred CCHHHHHHHHHHHHHHcCCCCCCccEEEc
Q psy4744 236 FNQASLVEFFTNFYQKARVNPGQVDFLEA 264 (270)
Q Consensus 236 ~~~~~~~~a~~~al~~agi~~~did~v~~ 264 (270)
+..+-...+++++|+++||+|+|||.|..
T Consensus 26 ~~~~L~~~a~~~al~~agi~~~~Id~vv~ 54 (392)
T PRK06633 26 PAPMLAAHLIKDILQNSKIDPALVNEVIL 54 (392)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHcCEEEE
Confidence 34667799999999999999999998754
No 216
>PRK07851 acetyl-CoA acetyltransferase; Provisional
Probab=39.10 E-value=22 Score=32.09 Aligned_cols=26 Identities=15% Similarity=0.236 Sum_probs=23.0
Q ss_pred HHHHHHHHHHHHHHc-CCCCCCccEEE
Q psy4744 238 QASLVEFFTNFYQKA-RVNPGQVDFLE 263 (270)
Q Consensus 238 ~~~~~~a~~~al~~a-gi~~~did~v~ 263 (270)
.+-..++++++|+++ ||+++|||.+.
T Consensus 28 ~eL~~~A~~~AL~da~gl~~~dID~vv 54 (406)
T PRK07851 28 DDLAAQMVRAALDKVPALDPTDIDDLM 54 (406)
T ss_pred HHHHHHHHHHHHHhccCCCHHHCCEEE
Confidence 556788999999997 99999999875
No 217
>TIGR02446 FadI fatty oxidation complex, beta subunit FadI. This subunit of the FadJI complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit, and YfcY. This protein is almost always located adjacent to FadJ (TIGR02440). The FadJI complex is needed for anaerobic beta-oxidation of short-chain fatty acids in E. coli.
Probab=38.48 E-value=49 Score=30.09 Aligned_cols=27 Identities=7% Similarity=0.123 Sum_probs=23.1
Q ss_pred HHHHHHHHHHHHHHcCCCCCCccEEEc
Q psy4744 238 QASLVEFFTNFYQKARVNPGQVDFLEA 264 (270)
Q Consensus 238 ~~~~~~a~~~al~~agi~~~did~v~~ 264 (270)
.+-..++++++|+++||+|+|||.+..
T Consensus 32 ~~L~~~a~~~al~~agl~~~~Id~vi~ 58 (430)
T TIGR02446 32 VDLGKMVVSELLARSEIDPKLIEQLVF 58 (430)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEE
Confidence 445689999999999999999998754
No 218
>cd00834 KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II. KASs are responsible for the elongation steps in fatty acid biosynthesis. KASIII catalyses the initial condensation and KAS I and II catalyze further elongation steps by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP.
Probab=38.26 E-value=1.5e+02 Score=26.36 Aligned_cols=79 Identities=13% Similarity=0.107 Sum_probs=44.1
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCCeEEEEccCCCCccccccCccccchhhHhhhhhhhHHHHHHHHcCCCCCCcc---
Q psy4744 52 VRCFIEPCFEAILDAGINPKSLAGSNSSVYTNSCISDDESLGCDERLTTNFWLLAHVRCLLANRIAYLFDLKGPSFT--- 128 (270)
Q Consensus 52 ~~l~l~a~~~Al~dAg~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl~Gp~~~--- 128 (270)
..-...++++||+++|+++++++ .+.....+.... ++ .-..-+...|+-..+.+.
T Consensus 274 ~~~~~~~i~~al~~agi~~~dId-----~v~~h~tgt~~~--------d~---------~E~~al~~~~~~~~~~~~v~s 331 (406)
T cd00834 274 GEGAARAMRAALADAGLSPEDID-----YINAHGTSTPLN--------DA---------AESKAIKRVFGEHAKKVPVSS 331 (406)
T ss_pred cHHHHHHHHHHHHHcCCCHHHCC-----EEecccccCccc--------cH---------HHHHHHHHHhcccCCCCceeC
Confidence 34456688999999999887765 333322221100 00 001113333433111111
Q ss_pred ----c-cccchhHHHHHHHHHHHHhcCCC
Q psy4744 129 ----I-DNSWTGGIEVLRQAVQDISEGRV 152 (270)
Q Consensus 129 ----v-~~~cas~~~al~~A~~~i~~G~~ 152 (270)
+ .+.++||+..+..++.+|+.|..
T Consensus 332 ~k~~~Gh~~~AsG~~~l~~~~~~l~~~~i 360 (406)
T cd00834 332 TKSMTGHLLGAAGAVEAIATLLALRDGVL 360 (406)
T ss_pred cchhhccchhhhhHHHHHHHHHHHhcCCc
Confidence 1 24578999999999999999953
No 219
>PTZ00455 3-ketoacyl-CoA thiolase; Provisional
Probab=37.00 E-value=26 Score=31.99 Aligned_cols=27 Identities=11% Similarity=0.107 Sum_probs=23.0
Q ss_pred HHHHHHHHHHHHHHcCCCCCC--ccEEEc
Q psy4744 238 QASLVEFFTNFYQKARVNPGQ--VDFLEA 264 (270)
Q Consensus 238 ~~~~~~a~~~al~~agi~~~d--id~v~~ 264 (270)
.+-..++++++|+++||+++| ||.+..
T Consensus 49 ~eL~~~a~~~al~~agl~~~d~~ID~vi~ 77 (438)
T PTZ00455 49 EELLATAIQGTLENTGLDGKAALVDKVVV 77 (438)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCcCEEEE
Confidence 345689999999999999999 998753
No 220
>COG3424 BcsA Predicted naringenin-chalcone synthase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=36.62 E-value=22 Score=30.67 Aligned_cols=24 Identities=13% Similarity=0.210 Sum_probs=21.2
Q ss_pred HHHHHHHHHHHcCCCCCCccEEEc
Q psy4744 241 LVEFFTNFYQKARVNPGQVDFLEA 264 (270)
Q Consensus 241 ~~~a~~~al~~agi~~~did~v~~ 264 (270)
..++.++||+.+++.|+|||.|.+
T Consensus 80 ~v~a~r~aL~~~~l~pedId~vv~ 103 (356)
T COG3424 80 GVDALRRALDGSPLRPEDIDAVVT 103 (356)
T ss_pred HHHHHHHHhccCCCCHHHCcEEEE
Confidence 478999999999999999998753
No 221
>PRK07937 lipid-transfer protein; Provisional
Probab=36.13 E-value=1.3e+02 Score=26.50 Aligned_cols=27 Identities=22% Similarity=0.432 Sum_probs=21.9
Q ss_pred hhHHHHHHHHHHHHhcCCCCEEEEeee
Q psy4744 134 TGGIEVLRQAVQDISEGRVDTAIVGVS 160 (270)
Q Consensus 134 as~~~al~~A~~~i~~G~~d~~lv~g~ 160 (270)
+||+.-+..+++.|+.+.++.+|+.+.
T Consensus 309 atG~~~~~e~~~QL~g~~a~~~l~~~~ 335 (352)
T PRK07937 309 AAGLERIGEAARHIWDGSARRALAHAT 335 (352)
T ss_pred HHHHHHHHHHHHHHhccCCCEEEEecc
Confidence 467888889999999888888887653
No 222
>TIGR03285 methan_mark_14 putative methanogenesis marker protein 14. Members of this protein family, to date, are found in a completed prokaryotic genome if and only if the species is one of the archaeal methanogens. The exact function is unknown, but likely is linked to methanogenesis or a process closely connected to it.
Probab=35.90 E-value=41 Score=29.65 Aligned_cols=25 Identities=16% Similarity=0.276 Sum_probs=21.4
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEE
Q psy4744 239 ASLVEFFTNFYQKARVNPGQVDFLE 263 (270)
Q Consensus 239 ~~~~~a~~~al~~agi~~~did~v~ 263 (270)
+...+.+.+++++|+++.+|+|||.
T Consensus 67 elV~dtl~e~~k~A~l~i~DL~FVV 91 (445)
T TIGR03285 67 ELVKDTLKESLKKAGLDIDDLDFVV 91 (445)
T ss_pred HHHHHHHHHHHHHcCCChhhccEEE
Confidence 3457788899999999999999985
No 223
>PRK06366 acetyl-CoA acetyltransferase; Provisional
Probab=35.84 E-value=1.2e+02 Score=27.03 Aligned_cols=19 Identities=5% Similarity=-0.080 Sum_probs=16.8
Q ss_pred HHHHHHHHHHCCCCCCCCC
Q psy4744 56 IEPCFEAILDAGINPKSLA 74 (270)
Q Consensus 56 l~a~~~Al~dAg~~~~~~~ 74 (270)
..++.+|++.||++++|+|
T Consensus 288 ~~A~~~al~~Agl~~~DiD 306 (388)
T PRK06366 288 IPATRKLLEKQNKSIDYYD 306 (388)
T ss_pred HHHHHHHHHHcCCCHHHcc
Confidence 5799999999999988876
No 224
>PRK13411 molecular chaperone DnaK; Provisional
Probab=35.57 E-value=34 Score=32.95 Aligned_cols=30 Identities=17% Similarity=0.280 Sum_probs=26.5
Q ss_pred HHHHHHHHHHHcCCCCCCccEEEcccCCCC
Q psy4744 241 LVEFFTNFYQKARVNPGQVDFLEADGSAIK 270 (270)
Q Consensus 241 ~~~a~~~al~~agi~~~did~v~~hgtgt~ 270 (270)
..+.++++|++++++++||+.|.+-|-+|+
T Consensus 310 ~~~~i~~~L~~a~~~~~~id~ViLvGGssr 339 (653)
T PRK13411 310 TIEPMQQALKDAGLKPEDIDRVILVGGSTR 339 (653)
T ss_pred HHHHHHHHHHHcCCCHHHCcEEEEECCCCC
Confidence 467889999999999999999999997764
No 225
>KOG0103|consensus
Probab=34.77 E-value=35 Score=32.69 Aligned_cols=30 Identities=10% Similarity=0.106 Sum_probs=25.8
Q ss_pred HHHHHHHHHHHcCCCCCCccEEEcccCCCC
Q psy4744 241 LVEFFTNFYQKARVNPGQVDFLEADGSAIK 270 (270)
Q Consensus 241 ~~~a~~~al~~agi~~~did~v~~hgtgt~ 270 (270)
+..-+..+|++++++.+||+.||.-|.+|+
T Consensus 316 v~~p~~~~l~d~~l~~edi~~VEiVGg~sr 345 (727)
T KOG0103|consen 316 VEVPLLKALADAKLKVEDIHAVEIVGGLSR 345 (727)
T ss_pred hhHHHHHHHHHhcCccccceeEEEecCccc
Confidence 345678899999999999999999998774
No 226
>TIGR03722 arch_KAE1 universal archaeal protein Kae1. This family represents the archaeal protein Kae1. Its partner Bud32 is fused with it in about half of the known archaeal genomes. The pair, which appears universal in the archaea, corresponds to EKC/KEOPS complex in eukaryotes. A recent characterization of the member from Pyrococcus abyssi, as an iron-binding, atypical DNA-binding protein with an apurinic lyase activity, challenges the common annotation of close homologs as O-sialoglycoprotein endopeptidase. The latter annotation is based on a characterized protein from the bacterium Pasteurella haemolytica.
Probab=34.77 E-value=32 Score=29.86 Aligned_cols=25 Identities=12% Similarity=0.170 Sum_probs=21.5
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEE
Q psy4744 239 ASLVEFFTNFYQKARVNPGQVDFLE 263 (270)
Q Consensus 239 ~~~~~a~~~al~~agi~~~did~v~ 263 (270)
..+...++++|+++|++++|||.|-
T Consensus 47 ~~l~~~i~~~l~~~~~~~~did~Ia 71 (322)
T TIGR03722 47 EVAPKLIKEALEEAGVSLEDIDAVA 71 (322)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEE
Confidence 3456789999999999999999975
No 227
>COG3425 PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipid metabolism]
Probab=33.63 E-value=39 Score=30.06 Aligned_cols=59 Identities=17% Similarity=0.191 Sum_probs=35.2
Q ss_pred ecChHHHHhhcCceEeEEEeccCCCCCCCcCCCHHH---HHHHHHHHHHHcCCCCCCccEEEc
Q psy4744 205 LQRSETALRSYGEVLHAESRFYGSLERPFVGFNQAS---LVEFFTNFYQKARVNPGQVDFLEA 264 (270)
Q Consensus 205 L~~~~~A~~~~g~~~~~~~~~~~~~~~~~~~~~~~~---~~~a~~~al~~agi~~~did~v~~ 264 (270)
|+.++-|+.+ +..+.-...+-+...-++..++.+. -.+|.+++|++++++|.+|+.|+.
T Consensus 17 i~~~ela~~~-g~d~~k~~~gl~~~e~sv~~~~ED~vTmaveAA~~~l~r~~~D~~~Ig~v~v 78 (377)
T COG3425 17 IKLEELARAW-GVDPEKIKKGLGVEEKSVPPWDEDAVTMAVEAARNALKRADIDPSKIGAVIV 78 (377)
T ss_pred eeHHHHHhhc-CCChHHhhhccccccccCCCCchhHHHHHHHHHHHHHhccCCCHHHCceEEE
Confidence 4445555544 4333222333333323344444443 478889999999999999998874
No 228
>PRK14878 UGMP family protein; Provisional
Probab=33.59 E-value=31 Score=30.04 Aligned_cols=24 Identities=17% Similarity=0.238 Sum_probs=21.3
Q ss_pred HHHHHHHHHHHHcCCCCCCccEEE
Q psy4744 240 SLVEFFTNFYQKARVNPGQVDFLE 263 (270)
Q Consensus 240 ~~~~a~~~al~~agi~~~did~v~ 263 (270)
.+...++++|+++|++++|||.|-
T Consensus 47 ~l~~~i~~~l~~a~~~~~did~Ia 70 (323)
T PRK14878 47 VAPELLRKALEKAGISIEDIDAVA 70 (323)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEE
Confidence 356889999999999999999975
No 229
>PF07311 Dodecin: Dodecin; InterPro: IPR009923 This entry represents proteins with a Dodecin-like topology. Dodecin flavoprotein is a small dodecameric flavin-binding protein from Halobacterium salinarium (Halobacterium halobium) that contains two flavins stacked in a single binding pocket between two tryptophan residues to form an aromatic tetrade []. Dodecin binds riboflavin, although it appears to have a broad specificity for flavins. Lumichrome, a molecule associated with flavin metabolism, appears to be a ligand of dodecin, which could act as a waste-trapping device. ; PDB: 2VYX_L 2DEG_F 2V18_K 2V19_D 2UX9_B 2CZ8_E 2V21_F 2CC8_A 2CCB_A 2VX9_A ....
Probab=33.40 E-value=24 Score=22.88 Aligned_cols=26 Identities=15% Similarity=0.170 Sum_probs=22.8
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEc
Q psy4744 239 ASLVEFFTNFYQKARVNPGQVDFLEA 264 (270)
Q Consensus 239 ~~~~~a~~~al~~agi~~~did~v~~ 264 (270)
.+...|++.|+++|.-+..+|..+|.
T Consensus 14 ~S~edAv~~Av~~A~kTl~ni~~~eV 39 (66)
T PF07311_consen 14 KSWEDAVQNAVARASKTLRNIRWFEV 39 (66)
T ss_dssp SHHHHHHHHHHHHHHHHSSSEEEEEE
T ss_pred CCHHHHHHHHHHHHhhchhCcEEEEE
Confidence 36899999999999999999998874
No 230
>PTZ00186 heat shock 70 kDa precursor protein; Provisional
Probab=33.12 E-value=51 Score=31.83 Aligned_cols=30 Identities=10% Similarity=0.082 Sum_probs=26.1
Q ss_pred HHHHHHHHHHHcCCCCCCccEEEcccCCCC
Q psy4744 241 LVEFFTNFYQKARVNPGQVDFLEADGSAIK 270 (270)
Q Consensus 241 ~~~a~~~al~~agi~~~did~v~~hgtgt~ 270 (270)
....++++|+++|++++|||-|.+-|-+|+
T Consensus 336 ~~~~v~~~L~~a~~~~~dId~VvLVGGssr 365 (657)
T PTZ00186 336 SIAPCKQCMKDAGVELKEINDVVLVGGMTR 365 (657)
T ss_pred HHHHHHHHHHHcCCChhhCCEEEEECCccc
Confidence 456778999999999999999999998774
No 231
>PF00814 Peptidase_M22: Glycoprotease family; InterPro: IPR000905 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of metallopeptidases belong to MEROPS peptidase family M22 (clan MK). The type example being O-sialoglycoprotein endopeptidase (3.4.24.57 from EC) from Pasteurella haemolytica (Mannheimia haemolytica). O-Sialoglycoprotein endopeptidase is secreted by the bacterium P. haemolytica, and digests only proteins that are heavily sialylated, in particular those with sialylated serine and threonine residues []. Substrate proteins include glycophorin A and leukocyte surface antigens CD34, CD43, CD44 and CD45 [, ]. Removal of glycosylation, by treatment with neuraminidase, completely negates susceptibility to O-sialoglycoprotein endopeptidase digestion [, ]. Sequence similarity searches have revealed other members of the M22 family, from yeast, Mycobacterium, Haemophilus influenzae and the cyanobacterium Synechocystis []. The zinc-binding and catalytic residues of this family have not been determined, although the motif HMEGH may be a zinc-binding region [].; GO: 0004222 metalloendopeptidase activity, 0006508 proteolysis; PDB: 2A6A_A 2GEL_G 2GEM_B 1OKJ_B 3ENO_A 3EN9_B 2VWB_B 3ENH_B 2IVO_D 2IVP_A ....
Probab=32.61 E-value=67 Score=27.11 Aligned_cols=77 Identities=13% Similarity=0.135 Sum_probs=43.9
Q ss_pred CCCHHHHhhcChHHHHHHHHHHHHHHHCCCCCCCCCCCCeEEEEccCCCCccccccCccccchhhHhhhhhhhHHHHHHH
Q psy4744 39 SLHSRLANVLDPLVRCFIEPCFEAILDAGINPKSLAGSNSSVYTNSCISDDESLGCDERLTTNFWLLAHVRCLLANRIAY 118 (270)
Q Consensus 39 ~~~~~~~~~~~~~~~l~l~a~~~Al~dAg~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~ 118 (270)
|+-|+.+.+. -.+.......++|++++++..+++ .+.++.+.|.+..+ ...-..+.-++.
T Consensus 19 Gv~P~~a~r~--H~~~L~~~i~~~l~~~~~~~~did----~iavt~GPGsftgL--------------rvG~~~Ak~La~ 78 (268)
T PF00814_consen 19 GVVPEIASRQ--HSENLPPLIEELLKEAGISLSDID----AIAVTRGPGSFTGL--------------RVGLSFAKGLAL 78 (268)
T ss_dssp SSSHCCHHHH--HHHHHHHHHHHHHHHHTS-GGGES----EEEEEEESS-HHHH--------------HHHHHHHHHHHH
T ss_pred CCCcHHHHHH--HHHHHHHHHHHHHHHcCCCHHHCC----EEEEecCCCccccc--------------HHHHHHHHHHHH
Confidence 5666666544 335667788999999999988887 44444443332111 122344555666
Q ss_pred HcCCCCCCccccccchhHH
Q psy4744 119 LFDLKGPSFTIDNSWTGGI 137 (270)
Q Consensus 119 ~~gl~Gp~~~v~~~cas~~ 137 (270)
.++. |.+.|++--+-..
T Consensus 79 ~~~~--Pli~v~~l~a~a~ 95 (268)
T PF00814_consen 79 ALNI--PLIGVSHLEAHAL 95 (268)
T ss_dssp HTT----EEEEEHHHHHHH
T ss_pred HhCC--CeEeeccHHHHHH
Confidence 6665 7777776444333
No 232
>PRK07801 acetyl-CoA acetyltransferase; Provisional
Probab=32.55 E-value=1.5e+02 Score=26.30 Aligned_cols=19 Identities=16% Similarity=0.214 Sum_probs=16.5
Q ss_pred HHHHHHHHHHCCCCCCCCC
Q psy4744 56 IEPCFEAILDAGINPKSLA 74 (270)
Q Consensus 56 l~a~~~Al~dAg~~~~~~~ 74 (270)
..++++|++.||+.++|++
T Consensus 283 ~~a~~~a~~~agi~~~did 301 (382)
T PRK07801 283 IPATRYALEKTGLSIDDID 301 (382)
T ss_pred HHHHHHHHHHcCCCHHHcC
Confidence 4689999999999988876
No 233
>PF00814 Peptidase_M22: Glycoprotease family; InterPro: IPR000905 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of metallopeptidases belong to MEROPS peptidase family M22 (clan MK). The type example being O-sialoglycoprotein endopeptidase (3.4.24.57 from EC) from Pasteurella haemolytica (Mannheimia haemolytica). O-Sialoglycoprotein endopeptidase is secreted by the bacterium P. haemolytica, and digests only proteins that are heavily sialylated, in particular those with sialylated serine and threonine residues []. Substrate proteins include glycophorin A and leukocyte surface antigens CD34, CD43, CD44 and CD45 [, ]. Removal of glycosylation, by treatment with neuraminidase, completely negates susceptibility to O-sialoglycoprotein endopeptidase digestion [, ]. Sequence similarity searches have revealed other members of the M22 family, from yeast, Mycobacterium, Haemophilus influenzae and the cyanobacterium Synechocystis []. The zinc-binding and catalytic residues of this family have not been determined, although the motif HMEGH may be a zinc-binding region [].; GO: 0004222 metalloendopeptidase activity, 0006508 proteolysis; PDB: 2A6A_A 2GEL_G 2GEM_B 1OKJ_B 3ENO_A 3EN9_B 2VWB_B 3ENH_B 2IVO_D 2IVP_A ....
Probab=31.83 E-value=41 Score=28.38 Aligned_cols=31 Identities=13% Similarity=0.343 Sum_probs=24.0
Q ss_pred HHHHHHHHHHHHHHcCCCCCCccEEE-cccCC
Q psy4744 238 QASLVEFFTNFYQKARVNPGQVDFLE-ADGSA 268 (270)
Q Consensus 238 ~~~~~~a~~~al~~agi~~~did~v~-~hgtg 268 (270)
.+.+...++++|++++++++|||.|- .-|+|
T Consensus 30 ~~~L~~~i~~~l~~~~~~~~did~iavt~GPG 61 (268)
T PF00814_consen 30 SENLPPLIEELLKEAGISLSDIDAIAVTRGPG 61 (268)
T ss_dssp HHHHHHHHHHHHHHHTS-GGGESEEEEEEESS
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEecCCC
Confidence 45678899999999999999999964 34444
No 234
>PRK07850 acetyl-CoA acetyltransferase; Provisional
Probab=31.56 E-value=2.9e+02 Score=24.71 Aligned_cols=20 Identities=10% Similarity=0.190 Sum_probs=17.1
Q ss_pred HHHHHHHHHHCCCCCCCCCC
Q psy4744 56 IEPCFEAILDAGINPKSLAG 75 (270)
Q Consensus 56 l~a~~~Al~dAg~~~~~~~~ 75 (270)
..++.+||+.+|+.++|++-
T Consensus 288 ~~a~~~al~~agl~~~did~ 307 (387)
T PRK07850 288 VQATAKVLEKAGMKIGDIDL 307 (387)
T ss_pred HHHHHHHHHHcCCCHHHcCe
Confidence 57899999999999888763
No 235
>PLN03184 chloroplast Hsp70; Provisional
Probab=30.95 E-value=49 Score=32.06 Aligned_cols=30 Identities=13% Similarity=0.106 Sum_probs=26.3
Q ss_pred HHHHHHHHHHHcCCCCCCccEEEcccCCCC
Q psy4744 241 LVEFFTNFYQKARVNPGQVDFLEADGSAIK 270 (270)
Q Consensus 241 ~~~a~~~al~~agi~~~did~v~~hgtgt~ 270 (270)
....++++|++++++++||+.|.+-|-+|+
T Consensus 348 ~~~~i~~~L~~a~~~~~dId~ViLvGGssr 377 (673)
T PLN03184 348 CKTPVENALRDAKLSFKDIDEVILVGGSTR 377 (673)
T ss_pred HHHHHHHHHHHcCCChhHccEEEEECCccc
Confidence 466789999999999999999999997764
No 236
>PRK08235 acetyl-CoA acetyltransferase; Provisional
Probab=30.70 E-value=1.7e+02 Score=26.19 Aligned_cols=20 Identities=5% Similarity=-0.134 Sum_probs=17.0
Q ss_pred HHHHHHHHHHCCCCCCCCCC
Q psy4744 56 IEPCFEAILDAGINPKSLAG 75 (270)
Q Consensus 56 l~a~~~Al~dAg~~~~~~~~ 75 (270)
..++++||+.||++++|++-
T Consensus 294 ~~a~~~al~~agl~~~did~ 313 (393)
T PRK08235 294 GYAINALLEKTGKTVEDIDL 313 (393)
T ss_pred HHHHHHHHHHhCCCHHHCCe
Confidence 46899999999999888763
No 237
>cd00829 SCP-x_thiolase Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2 has multiple roles in intracellular lipid circulation and metabolism. The N-terminal presequence in the SCP-x isoform represents a peroxisomal 3-ketacyl-Coa thiolase specific for branched-chain acyl CoAs, which is proteolytically cleaved from the sterol carrier protein.
Probab=30.59 E-value=1.8e+02 Score=25.56 Aligned_cols=21 Identities=24% Similarity=0.195 Sum_probs=17.6
Q ss_pred HHHHHHHHHHHHCCCCCCCCC
Q psy4744 54 CFIEPCFEAILDAGINPKSLA 74 (270)
Q Consensus 54 l~l~a~~~Al~dAg~~~~~~~ 74 (270)
-...++++||++||+.++|++
T Consensus 252 ~~~~a~~~al~~Agl~~~did 272 (375)
T cd00829 252 AARLAARRAYKMAGITPDDID 272 (375)
T ss_pred HHHHHHHHHHHHcCCCHHHCC
Confidence 345789999999999988876
No 238
>CHL00094 dnaK heat shock protein 70
Probab=30.29 E-value=56 Score=31.28 Aligned_cols=30 Identities=13% Similarity=0.149 Sum_probs=25.8
Q ss_pred HHHHHHHHHHHcCCCCCCccEEEcccCCCC
Q psy4744 241 LVEFFTNFYQKARVNPGQVDFLEADGSAIK 270 (270)
Q Consensus 241 ~~~a~~~al~~agi~~~did~v~~hgtgt~ 270 (270)
....++++|++++++++||+.|.+-|-+|+
T Consensus 311 ~~~~i~~~L~~a~~~~~~i~~ViLvGGssr 340 (621)
T CHL00094 311 CRIPVENALKDAKLDKSDIDEVVLVGGSTR 340 (621)
T ss_pred HHHHHHHHHHHcCCChhhCcEEEEECCccC
Confidence 355678999999999999999999997764
No 239
>TIGR02350 prok_dnaK chaperone protein DnaK. Members of this family are the chaperone DnaK, of the DnaK-DnaJ-GrpE chaperone system. All members of the seed alignment were taken from completely sequenced bacterial or archaeal genomes and (except for Mycoplasma sequence) found clustered with other genes of this systems. This model excludes DnaK homologs that are not DnaK itself, such as the heat shock cognate protein HscA (TIGR01991). However, it is not designed to distinguish among DnaK paralogs in eukaryotes. Note that a number of dnaK genes have shadow ORFs in the same reverse (relative to dnaK) reading frame, a few of which have been assigned glutamate dehydrogenase activity. The significance of this observation is unclear; lengths of such shadow ORFs are highly variable as if the presumptive protein product is not conserved.
Probab=30.07 E-value=54 Score=31.18 Aligned_cols=32 Identities=13% Similarity=0.124 Sum_probs=27.1
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEcccCCCC
Q psy4744 239 ASLVEFFTNFYQKARVNPGQVDFLEADGSAIK 270 (270)
Q Consensus 239 ~~~~~a~~~al~~agi~~~did~v~~hgtgt~ 270 (270)
......++++|++++++++||+.|++-|-+|+
T Consensus 305 ~~~~~~i~~~l~~a~~~~~~i~~V~LvGGssr 336 (595)
T TIGR02350 305 ERTKEPVRQALKDAGLSASDIDEVILVGGSTR 336 (595)
T ss_pred HHHHHHHHHHHHHcCCCHhHCcEEEEECCccc
Confidence 33567789999999999999999999987763
No 240
>TIGR00329 gcp_kae1 metallohydrolase, glycoprotease/Kae1 family. This subfamily includes the well-studied secreted O-sialoglycoprotein endopeptidase (glycoprotease, EC 3.4.24.57) of Pasteurella haemolytica, a pathogen. A member from Riemerella anatipestifer, associated with cohemolysin activity, likewise is exported without benefit of a classical signal peptide and shows glycoprotease activity on the test substrate glycophorin. However, archaeal members of this subfamily show unrelated activities as demonstrated in Pyrococcus abyssi: DNA binding, iron binding, apurinic endonuclease activity, genomic association with a kinase domain, and no glycoprotease activity. This family thus pulls together a set of proteins as a homology group that appears to be near-universal in life, yet heterogeneous in assayed function between bacteria and archaea.
Probab=30.04 E-value=41 Score=28.98 Aligned_cols=30 Identities=10% Similarity=0.365 Sum_probs=23.9
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEE-cccCC
Q psy4744 239 ASLVEFFTNFYQKARVNPGQVDFLE-ADGSA 268 (270)
Q Consensus 239 ~~~~~a~~~al~~agi~~~did~v~-~hgtg 268 (270)
..+...++++|+++|++++|||.|- .-|+|
T Consensus 50 ~~l~~~i~~~l~~~~~~~~did~iav~~GPG 80 (305)
T TIGR00329 50 ENIPPLLERALIESNVDKSEIDLIAYTQGPG 80 (305)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEecCCC
Confidence 4467789999999999999999964 44444
No 241
>PRK06025 acetyl-CoA acetyltransferase; Provisional
Probab=30.03 E-value=1.4e+02 Score=27.10 Aligned_cols=19 Identities=11% Similarity=0.329 Sum_probs=16.2
Q ss_pred HHHHHHHHHHCCCCCCCCC
Q psy4744 56 IEPCFEAILDAGINPKSLA 74 (270)
Q Consensus 56 l~a~~~Al~dAg~~~~~~~ 74 (270)
..+++++|+++|++++|++
T Consensus 318 ~~Ai~~aL~~AGl~~~DID 336 (417)
T PRK06025 318 VPAAKKVLAKAGLTKDDID 336 (417)
T ss_pred HHHHHHHHHHcCCCHHHCc
Confidence 4688999999999888876
No 242
>PRK09185 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed
Probab=29.88 E-value=1.5e+02 Score=26.40 Aligned_cols=77 Identities=14% Similarity=0.077 Sum_probs=41.9
Q ss_pred HHHHHHHHHHHHCCCCCCCCCCCCeEEEEccCCCCccccccCccccchhhHhhhhhhhHHHHHHHHcCCCCCCcc-----
Q psy4744 54 CFIEPCFEAILDAGINPKSLAGSNSSVYTNSCISDDESLGCDERLTTNFWLLAHVRCLLANRIAYLFDLKGPSFT----- 128 (270)
Q Consensus 54 l~l~a~~~Al~dAg~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl~Gp~~~----- 128 (270)
-...++++||++||+.+++++ .+.....+.... ++.. ..-+...|+-.-|..+
T Consensus 261 ~~~~a~~~Al~~Agl~~~dId-----~v~~hgtgt~~~--------D~~E---------~~al~~~f~~~~pv~s~K~~~ 318 (392)
T PRK09185 261 GAILAMQQALADAGLAPADIG-----YINLHGTATPLN--------DAME---------SRAVAAVFGDGVPCSSTKGLT 318 (392)
T ss_pred HHHHHHHHHHHHcCCCHHHcc-----EEEeCCCCCcCC--------CHHH---------HHHHHHHhCCCCceeCCCccc
Confidence 345788999999999987765 222222111100 0000 1113334442212111
Q ss_pred ccccchhHHHHHHHHHHHHhcCCC
Q psy4744 129 IDNSWTGGIEVLRQAVQDISEGRV 152 (270)
Q Consensus 129 v~~~cas~~~al~~A~~~i~~G~~ 152 (270)
=.+.++||+..+..+...|+.|..
T Consensus 319 Gh~~~AaG~~~l~~~~~~l~~~~i 342 (392)
T PRK09185 319 GHTLGAAGAVEAAICWLALRHGLP 342 (392)
T ss_pred ccChhhcchHHHHHHHHHHhcCCC
Confidence 123467888888999999988853
No 243
>PRK00290 dnaK molecular chaperone DnaK; Provisional
Probab=29.79 E-value=60 Score=31.10 Aligned_cols=31 Identities=13% Similarity=0.150 Sum_probs=26.7
Q ss_pred HHHHHHHHHHHHcCCCCCCccEEEcccCCCC
Q psy4744 240 SLVEFFTNFYQKARVNPGQVDFLEADGSAIK 270 (270)
Q Consensus 240 ~~~~a~~~al~~agi~~~did~v~~hgtgt~ 270 (270)
...+.++++|+++++++.||+.|.+-|-+|+
T Consensus 308 ~~~~~i~~~l~~a~~~~~~id~ViLvGGssr 338 (627)
T PRK00290 308 RTIEPCKQALKDAGLSVSDIDEVILVGGSTR 338 (627)
T ss_pred HHHHHHHHHHHHcCCChhhCcEEEEECCcCC
Confidence 3567789999999999999999999987763
No 244
>KOG3084|consensus
Probab=29.64 E-value=48 Score=28.65 Aligned_cols=30 Identities=0% Similarity=0.072 Sum_probs=23.5
Q ss_pred cCCCHHHHHHHHHHHHHHcCCCCCCccEEE
Q psy4744 234 VGFNQASLVEFFTNFYQKARVNPGQVDFLE 263 (270)
Q Consensus 234 ~~~~~~~~~~a~~~al~~agi~~~did~v~ 263 (270)
..|.....+.++|+.+|++|++-++|+|+-
T Consensus 222 lEpGES~eeav~REtwEEtGi~V~~I~~~a 251 (345)
T KOG3084|consen 222 LEPGESIEEAVRRETWEETGIEVEVISYVA 251 (345)
T ss_pred CCccccHHHHHHHHHHHHhCceeeeEeeee
Confidence 344455567788999999999999999764
No 245
>PRK07314 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=29.57 E-value=2.3e+02 Score=25.33 Aligned_cols=20 Identities=15% Similarity=-0.049 Sum_probs=16.8
Q ss_pred cchhHHHHHHHHHHHHhcCC
Q psy4744 132 SWTGGIEVLRQAVQDISEGR 151 (270)
Q Consensus 132 ~cas~~~al~~A~~~i~~G~ 151 (270)
.++||+..+..++.+|+.|.
T Consensus 341 ~~AsG~~~~i~~~l~l~~~~ 360 (411)
T PRK07314 341 LGAAGAVEAIFSVLAIRDQV 360 (411)
T ss_pred HHHHHHHHHHHHHHHHhCCC
Confidence 36788888889999999996
No 246
>COG1214 Inactive homolog of metal-dependent proteases, putative molecular chaperone [Posttranslational modification, protein turnover, chaperones]
Probab=29.55 E-value=1.3e+02 Score=24.48 Aligned_cols=59 Identities=14% Similarity=0.217 Sum_probs=38.7
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCCCeEEEEccCCCCccccccCccccchhhHhhhhhhhHHHHHHHHcCCCCCCccccc
Q psy4744 53 RCFIEPCFEAILDAGINPKSLAGSNSSVYTNSCISDDESLGCDERLTTNFWLLAHVRCLLANRIAYLFDLKGPSFTIDN 131 (270)
Q Consensus 53 ~l~l~a~~~Al~dAg~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl~Gp~~~v~~ 131 (270)
...+....+.|.++|++..+++ .++++.+.|.+..++ ..-.++.-++..+|+ |.+.|++
T Consensus 39 e~l~~~i~~ll~~~~~~~~dld----~iav~~GPGSFTGlR--------------IG~~~AkgLA~~l~i--plvgvss 97 (220)
T COG1214 39 ERLMPMIDELLKEAGLSLQDLD----AIAVAKGPGSFTGLR--------------IGVAFAKGLALALNI--PLVGVSS 97 (220)
T ss_pred HHHHHHHHHHHHHcCCCHHHCC----EEEEccCCCcccchh--------------hHHHHHHHHHHHcCC--CEEEeCH
Confidence 4556678999999999988888 677777777665432 111233336666665 7666654
No 247
>PF01890 CbiG_C: Cobalamin synthesis G C-terminus; InterPro: IPR002750 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. CbiG proteins are specific for anaerobic cobalamin biosynthesis. CbiG, which shows homology with CobE of the aerobic pathway, participates in the conversion of cobalt-precorrin 5 into cobalt-precorrin 6 []. CbiG is responsible for the opening of the delta-lactone ring and extrusion of the C2-unit []. The aerobic pathway uses molecular oxygen to trigger the events at C-20 leading to contraction and expulsion of the C2-unit as acetic acid from a metal-free intermediate, whereas the anaerobic route involves the internal delivery of oxygen from a carboxylic acid terminus to C-20 followed by extrusion of the C2-unit as acetaldehyde, using cobalt complexes as substrates []. This entry represents the core domain of CibG.; GO: 0009236 cobalamin biosynthetic process; PDB: 3BY5_A 2W6K_A 2W6L_A 3EEQ_B.
Probab=29.49 E-value=54 Score=23.96 Aligned_cols=27 Identities=11% Similarity=0.197 Sum_probs=21.5
Q ss_pred CHHHHHHHHHHHHHHcCCCCCCccEEE
Q psy4744 237 NQASLVEFFTNFYQKARVNPGQVDFLE 263 (270)
Q Consensus 237 ~~~~~~~a~~~al~~agi~~~did~v~ 263 (270)
+.+.+.++++++|++.|+++.+|+.|-
T Consensus 13 ~~~~i~~ai~~~l~~~~~~~~~i~~ia 39 (121)
T PF01890_consen 13 PAEEIEEAIEQALAEAGLSPRSIAAIA 39 (121)
T ss_dssp -HHHHHHHHHHHHHHCT--GGGEEEEE
T ss_pred CHHHHHHHHHHHHHHcCCChhhccEEE
Confidence 467789999999999999999998874
No 248
>PRK05183 hscA chaperone protein HscA; Provisional
Probab=29.36 E-value=68 Score=30.72 Aligned_cols=31 Identities=13% Similarity=0.094 Sum_probs=26.6
Q ss_pred HHHHHHHHHHHHcCCCCCCccEEEcccCCCC
Q psy4744 240 SLVEFFTNFYQKARVNPGQVDFLEADGSAIK 270 (270)
Q Consensus 240 ~~~~a~~~al~~agi~~~did~v~~hgtgt~ 270 (270)
.....++++|++++++++||+.|.+-|-+|+
T Consensus 310 ~~~~~i~~~L~~a~~~~~~i~~ViLvGGssr 340 (616)
T PRK05183 310 RTLLACRRALRDAGVEADEVKEVVMVGGSTR 340 (616)
T ss_pred HHHHHHHHHHHHcCCCcccCCEEEEECCccc
Confidence 3466789999999999999999999987763
No 249
>KOG0104|consensus
Probab=29.33 E-value=55 Score=31.85 Aligned_cols=30 Identities=20% Similarity=0.288 Sum_probs=27.1
Q ss_pred HHHHHHHHHHHcCCCCCCccEEEcccCCCC
Q psy4744 241 LVEFFTNFYQKARVNPGQVDFLEADGSAIK 270 (270)
Q Consensus 241 ~~~a~~~al~~agi~~~did~v~~hgtgt~ 270 (270)
...-|..||++++++.+||+-|.+-|-||+
T Consensus 347 ~~~Pi~dAl~~a~l~ldeIn~ViL~Gg~TR 376 (902)
T KOG0104|consen 347 IVEPINDALKKAQLSLDEINQVILFGGATR 376 (902)
T ss_pred hhhhHHHHHHhcCCChhhhheeEEecCccc
Confidence 456789999999999999999999999985
No 250
>TIGR01991 HscA Fe-S protein assembly chaperone HscA. The Heat Shock Cognate proteins HscA and HscB act together as chaperones. HscA resembles DnaK but belongs in a separate clade. The apparent function is to aid assembly of iron-sulfur cluster proteins. Homologs from Buchnera and Wolbachia are clearly in the same clade but are highly derived and score lower than some examples of DnaK.
Probab=28.64 E-value=69 Score=30.57 Aligned_cols=32 Identities=6% Similarity=0.088 Sum_probs=27.0
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEcccCCCC
Q psy4744 239 ASLVEFFTNFYQKARVNPGQVDFLEADGSAIK 270 (270)
Q Consensus 239 ~~~~~a~~~al~~agi~~~did~v~~hgtgt~ 270 (270)
....+.++++|++++++++||+.|.+-|-+|+
T Consensus 293 ~~i~~~i~~~L~~a~~~~~~id~ViLvGGssr 324 (599)
T TIGR01991 293 QKTLSICRRALRDAGLSVEEIKGVVLVGGSTR 324 (599)
T ss_pred HHHHHHHHHHHHHcCCChhhCCEEEEECCcCC
Confidence 33567789999999999999999999887763
No 251
>PRK08256 lipid-transfer protein; Provisional
Probab=28.54 E-value=1.7e+02 Score=26.07 Aligned_cols=19 Identities=21% Similarity=0.356 Sum_probs=16.7
Q ss_pred HHHHHHHHHHCCCCCCCCC
Q psy4744 56 IEPCFEAILDAGINPKSLA 74 (270)
Q Consensus 56 l~a~~~Al~dAg~~~~~~~ 74 (270)
..++.+|++.+|++++|+|
T Consensus 267 ~~a~~~a~~~ag~~~~DiD 285 (391)
T PRK08256 267 RAAAQQVYEQAGIGPEDID 285 (391)
T ss_pred HHHHHHHHHHcCCCHHHCC
Confidence 4689999999999988876
No 252
>TIGR03150 fabF beta-ketoacyl-acyl-carrier-protein synthase II. FabB sequences should fall well below the noise cutoff of this model.
Probab=28.53 E-value=2.8e+02 Score=24.57 Aligned_cols=21 Identities=33% Similarity=0.428 Sum_probs=17.3
Q ss_pred HHHHHHHHHHHHCCCCCCCCC
Q psy4744 54 CFIEPCFEAILDAGINPKSLA 74 (270)
Q Consensus 54 l~l~a~~~Al~dAg~~~~~~~ 74 (270)
-...++++||++||+++++++
T Consensus 276 ~~~~ai~~Al~~Agi~~~dId 296 (407)
T TIGR03150 276 GAARAMRAALKDAGINPEDVD 296 (407)
T ss_pred HHHHHHHHHHHHcCCCHhHCC
Confidence 345788999999999887765
No 253
>PRK07027 cobalamin biosynthesis protein CbiG; Provisional
Probab=28.50 E-value=62 Score=23.87 Aligned_cols=28 Identities=4% Similarity=0.057 Sum_probs=24.1
Q ss_pred CHHHHHHHHHHHHHHcCCCCCCccEEEc
Q psy4744 237 NQASLVEFFTNFYQKARVNPGQVDFLEA 264 (270)
Q Consensus 237 ~~~~~~~a~~~al~~agi~~~did~v~~ 264 (270)
..+.+..+++++|++.|+.+.+|+.|-.
T Consensus 15 ~~e~i~~ai~~~L~~~~l~~~si~~las 42 (126)
T PRK07027 15 PAEQIEAAIRAALAQRPLASADVRVVAT 42 (126)
T ss_pred CHHHHHHHHHHHHHHcCCCHHHhheeEe
Confidence 4566899999999999999999988754
No 254
>PTZ00009 heat shock 70 kDa protein; Provisional
Probab=28.21 E-value=60 Score=31.33 Aligned_cols=30 Identities=10% Similarity=0.124 Sum_probs=26.0
Q ss_pred HHHHHHHHHHHcCCCCCCccEEEcccCCCC
Q psy4744 241 LVEFFTNFYQKARVNPGQVDFLEADGSAIK 270 (270)
Q Consensus 241 ~~~a~~~al~~agi~~~did~v~~hgtgt~ 270 (270)
....++++|++++++++||+.|++-|-+|+
T Consensus 315 ~~~~i~~~L~~a~~~~~~i~~ViLvGGssr 344 (653)
T PTZ00009 315 TLQPVEKVLKDAGMDKRSVHEVVLVGGSTR 344 (653)
T ss_pred HHHHHHHHHHHcCCCHHHCcEEEEECCCCC
Confidence 456788999999999999999999987764
No 255
>PTZ00400 DnaK-type molecular chaperone; Provisional
Probab=28.17 E-value=59 Score=31.45 Aligned_cols=30 Identities=13% Similarity=0.132 Sum_probs=25.9
Q ss_pred HHHHHHHHHHHcCCCCCCccEEEcccCCCC
Q psy4744 241 LVEFFTNFYQKARVNPGQVDFLEADGSAIK 270 (270)
Q Consensus 241 ~~~a~~~al~~agi~~~did~v~~hgtgt~ 270 (270)
....++++|+++|++++||+.|.+-|-+|+
T Consensus 350 ~~~~i~~~L~~a~~~~~~i~~ViLvGGssr 379 (663)
T PTZ00400 350 TIEPCEKCIKDAGVKKDELNDVILVGGMTR 379 (663)
T ss_pred HHHHHHHHHHHcCCCHHHCcEEEEECCccC
Confidence 456778999999999999999999987763
No 256
>cd00327 cond_enzymes Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction. Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products.
Probab=28.09 E-value=1.3e+02 Score=24.40 Aligned_cols=32 Identities=9% Similarity=0.069 Sum_probs=23.1
Q ss_pred cccchhHHHHHHHHHHHHhcC-------CCCEEEEeeec
Q psy4744 130 DNSWTGGIEVLRQAVQDISEG-------RVDTAIVGVSN 161 (270)
Q Consensus 130 ~~~cas~~~al~~A~~~i~~G-------~~d~~lv~g~~ 161 (270)
+..++|+...|..+.+.++.+ ..|.+++.+..
T Consensus 206 ~~~~as~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~g 244 (254)
T cd00327 206 HPLGAAGLAILDELLLMLEHEFIPPTPREPRTVLLLGFG 244 (254)
T ss_pred cchHHHHHHHHHHHHHHHhCCCcCCCCCCcCEEEEeeEc
Confidence 345678888888888888876 56777765543
No 257
>TIGR03725 bact_YeaZ universal bacterial protein YeaZ. This family describes a protein family, YeaZ, that appears to be universal in bacteria, but whose function is unknown. This family is related to the gcp (glycoprotease) protein family, also universal in bacteria and unknown in function. In Gram-positive lineages, members of these two related families often belong to the same operon, along with the ribosomal-protein-alanine acetyltransferase gene. Members of this family may occur as fusions with gcp or the ribosomal protein N-acetyltransferase rimI, and is frequently encoded next to rimI.
Probab=27.83 E-value=1.3e+02 Score=24.09 Aligned_cols=35 Identities=11% Similarity=0.091 Sum_probs=25.6
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCeEEEEccCCCCc
Q psy4744 51 LVRCFIEPCFEAILDAGINPKSLAGSNSSVYTNSCISDD 89 (270)
Q Consensus 51 ~~~l~l~a~~~Al~dAg~~~~~~~~~~~gv~~g~~~~~~ 89 (270)
.....+-...++|+++|+...+++ .++++.+.|.+
T Consensus 33 h~~~l~~~i~~~l~~~~~~~~~i~----~iav~~GPGSf 67 (202)
T TIGR03725 33 HSEILLPMIEELLAEAGLSLQDLD----AIAVGVGPGSF 67 (202)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC----EEEEecCCChH
Confidence 345666688999999999998887 56666555554
No 258
>PRK09604 UGMP family protein; Validated
Probab=27.43 E-value=51 Score=28.81 Aligned_cols=25 Identities=12% Similarity=0.276 Sum_probs=21.9
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEE
Q psy4744 239 ASLVEFFTNFYQKARVNPGQVDFLE 263 (270)
Q Consensus 239 ~~~~~a~~~al~~agi~~~did~v~ 263 (270)
+.+...++++|+++|++++|||.|-
T Consensus 53 ~~l~~~i~~~L~~~~~~~~did~ia 77 (332)
T PRK09604 53 ENIVPLIEEALKEAGLTLEDIDAIA 77 (332)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEE
Confidence 4467889999999999999999975
No 259
>TIGR03725 bact_YeaZ universal bacterial protein YeaZ. This family describes a protein family, YeaZ, that appears to be universal in bacteria, but whose function is unknown. This family is related to the gcp (glycoprotease) protein family, also universal in bacteria and unknown in function. In Gram-positive lineages, members of these two related families often belong to the same operon, along with the ribosomal-protein-alanine acetyltransferase gene. Members of this family may occur as fusions with gcp or the ribosomal protein N-acetyltransferase rimI, and is frequently encoded next to rimI.
Probab=26.20 E-value=59 Score=26.05 Aligned_cols=31 Identities=13% Similarity=0.238 Sum_probs=25.1
Q ss_pred HHHHHHHHHHHHHHcCCCCCCccEE-EcccCC
Q psy4744 238 QASLVEFFTNFYQKARVNPGQVDFL-EADGSA 268 (270)
Q Consensus 238 ~~~~~~a~~~al~~agi~~~did~v-~~hgtg 268 (270)
.+.+...++++|+++|++++|||.| -.-|+|
T Consensus 34 ~~~l~~~i~~~l~~~~~~~~~i~~iav~~GPG 65 (202)
T TIGR03725 34 SEILLPMIEELLAEAGLSLQDLDAIAVGVGPG 65 (202)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEecCCC
Confidence 4567889999999999999999975 455555
No 260
>PF13872 AAA_34: P-loop containing NTP hydrolase pore-1
Probab=25.81 E-value=36 Score=29.31 Aligned_cols=25 Identities=20% Similarity=0.263 Sum_probs=18.0
Q ss_pred CCccccccchhHHH--HHHHHHHHHhc
Q psy4744 125 PSFTIDNSWTGGIE--VLRQAVQDISE 149 (270)
Q Consensus 125 p~~~v~~~cas~~~--al~~A~~~i~~ 149 (270)
|..+++.++-|.++ +|.+|++.-..
T Consensus 29 p~~~~~~g~LS~~QLEaV~yA~q~h~~ 55 (303)
T PF13872_consen 29 PEEVIDSGLLSALQLEAVIYACQRHEQ 55 (303)
T ss_pred CHHHHhcccccHHHHHHHHHHHHHHHh
Confidence 77778888777765 78888765543
No 261
>TIGR00329 gcp_kae1 metallohydrolase, glycoprotease/Kae1 family. This subfamily includes the well-studied secreted O-sialoglycoprotein endopeptidase (glycoprotease, EC 3.4.24.57) of Pasteurella haemolytica, a pathogen. A member from Riemerella anatipestifer, associated with cohemolysin activity, likewise is exported without benefit of a classical signal peptide and shows glycoprotease activity on the test substrate glycophorin. However, archaeal members of this subfamily show unrelated activities as demonstrated in Pyrococcus abyssi: DNA binding, iron binding, apurinic endonuclease activity, genomic association with a kinase domain, and no glycoprotease activity. This family thus pulls together a set of proteins as a homology group that appears to be near-universal in life, yet heterogeneous in assayed function between bacteria and archaea.
Probab=24.68 E-value=2.7e+02 Score=23.93 Aligned_cols=43 Identities=5% Similarity=-0.012 Sum_probs=29.4
Q ss_pred CCCHHHHhhcChHHHHHHHHHHHHHHHCCCCCCCCCCCCeEEEEccCCC
Q psy4744 39 SLHSRLANVLDPLVRCFIEPCFEAILDAGINPKSLAGSNSSVYTNSCIS 87 (270)
Q Consensus 39 ~~~~~~~~~~~~~~~l~l~a~~~Al~dAg~~~~~~~~~~~gv~~g~~~~ 87 (270)
++.|..+.+. ..+.....+.++|+++|+++.+++ .+.++.+.+
T Consensus 38 Gi~p~~~~~~--H~~~l~~~i~~~l~~~~~~~~did----~iav~~GPG 80 (305)
T TIGR00329 38 GVVPEEASRH--HAENIPPLLERALIESNVDKSEID----LIAYTQGPG 80 (305)
T ss_pred CcCcchhHHH--HHHHHHHHHHHHHHHcCCCHHHCC----EEEEecCCC
Confidence 4555554433 446677788999999999988887 455554444
No 262
>PRK06501 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=24.36 E-value=2.1e+02 Score=25.88 Aligned_cols=22 Identities=27% Similarity=0.397 Sum_probs=17.7
Q ss_pred HHHHHHHHHHHHHCCCCCCCCC
Q psy4744 53 RCFIEPCFEAILDAGINPKSLA 74 (270)
Q Consensus 53 ~l~l~a~~~Al~dAg~~~~~~~ 74 (270)
.-...++++||+++|+.+++++
T Consensus 289 ~~~~~ai~~AL~~agi~p~dId 310 (425)
T PRK06501 289 SPAIGAIRAALADAGLTPEQID 310 (425)
T ss_pred HHHHHHHHHHHHHcCCCHHHcC
Confidence 3456788999999999887765
No 263
>PRK06504 acetyl-CoA acetyltransferase; Provisional
Probab=24.36 E-value=2.2e+02 Score=25.53 Aligned_cols=19 Identities=16% Similarity=0.272 Sum_probs=16.5
Q ss_pred HHHHHHHHHHCCCCCCCCC
Q psy4744 56 IEPCFEAILDAGINPKSLA 74 (270)
Q Consensus 56 l~a~~~Al~dAg~~~~~~~ 74 (270)
..++.+|++.+|++++|++
T Consensus 291 ~~a~~~a~~~agl~~~Did 309 (390)
T PRK06504 291 LPATERALKKAGMKIDDID 309 (390)
T ss_pred HHHHHHHHHHcCCCHHHCC
Confidence 4589999999999988876
No 264
>TIGR03427 ABC_peri_uca ABC transporter periplasmic binding protein, urea carboxylase region. Members of this family are ABC transporter periplasmic binding proteins associated with the urea carboxylase/allophanate hydrolase pathway, an alternative to urease for urea degradation. The protein is restricted to bacteria with the pathway, with its gene close to the urea carboxylase and allophanate hydrolase genes. The substrate for this transporter therefore is likely to be urea or a compound from which urea is easily derived.
Probab=24.10 E-value=81 Score=27.50 Aligned_cols=24 Identities=4% Similarity=0.122 Sum_probs=20.4
Q ss_pred HHHHHHHHHHcCCCCCCccEEEcc
Q psy4744 242 VEFFTNFYQKARVNPGQVDFLEAD 265 (270)
Q Consensus 242 ~~a~~~al~~agi~~~did~v~~h 265 (270)
...+.++|+++|++++||.++++-
T Consensus 118 ~~ll~~aL~~aGL~~~DV~~v~~~ 141 (328)
T TIGR03427 118 HYLLARALESVGLSEKDVKVVNTS 141 (328)
T ss_pred HHHHHHHHHHcCCCHHHeEEEeCC
Confidence 456788999999999999999863
No 265
>PTZ00340 O-sialoglycoprotein endopeptidase-like protein; Provisional
Probab=23.90 E-value=69 Score=28.24 Aligned_cols=30 Identities=10% Similarity=0.444 Sum_probs=24.4
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEE-cccCC
Q psy4744 239 ASLVEFFTNFYQKARVNPGQVDFLE-ADGSA 268 (270)
Q Consensus 239 ~~~~~a~~~al~~agi~~~did~v~-~hgtg 268 (270)
..+...++++|+++|++++|||.|- +.|+|
T Consensus 51 ~~l~~~i~~~l~~a~~~~~did~Iavt~GPG 81 (345)
T PTZ00340 51 EHILSLVKEALEEAKITPSDISLICYTKGPG 81 (345)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEecCCC
Confidence 4467889999999999999999864 55554
No 266
>PRK07661 acetyl-CoA acetyltransferase; Provisional
Probab=23.87 E-value=62 Score=29.02 Aligned_cols=27 Identities=15% Similarity=0.028 Sum_probs=23.1
Q ss_pred HHHHHHHHHHHHHHcCCCCCCccEEEc
Q psy4744 238 QASLVEFFTNFYQKARVNPGQVDFLEA 264 (270)
Q Consensus 238 ~~~~~~a~~~al~~agi~~~did~v~~ 264 (270)
.+-..++++++|+++|+.++|||.+..
T Consensus 28 ~eLa~~A~~~AL~~ag~~~~dID~vi~ 54 (391)
T PRK07661 28 DDLGALVVKETLKRAGNYEGPIDDLII 54 (391)
T ss_pred HHHHHHHHHHHHHhcCCChhHCCEEEE
Confidence 556788999999999988899998754
No 267
>PF06277 EutA: Ethanolamine utilisation protein EutA; InterPro: IPR009377 Proteins in this entry are EutA ethanolamine utilization proteins, reactivating factors for ethanolamine ammonia lyase, encoded by the ethanolamine utilization eut operon. The holoenzyme of adenosylcobalamin-dependent ethanolamine ammonia-lyase (EutBC, IPR0092462 from INTERPRO, IPR010628 from INTERPRO), which is part of the ethanolamine utilization pathway [, , ], undergoes suicidal inactivation during catalysis as well as inactivation in the absence of substrate. The inactivation involves the irreversible cleavage of the Co-C bond of the coenzyme. The inactivated holoenzyme undergoes rapid and continuous reactivation in the presence of ATP, Mg2+, and free adenosylcobalamin in permeabilised cells (in situ), homogenate, and cell extracts of Escherichia coli. The EutA protein is essential for reactivation. It was demonstrated with purified recombinant EutA that both the suicidally inactivated and O2-inactivated holoethanolamine ammonia lyase underwent rapid reactivation in vitro by EutA in the presence of adenosylcobalamin, ATP, and Mg2+ []. The inactive enzyme-cyanocobalamin complex was also activated in situ and in vitro by EutA under the same conditions. Thus EutA is believed to be the only component of the reactivating factor for ethanolamine ammonia lyase. Reactivation and activation occur through the exchange of modified coenzyme for free intact adenosylcobalamin []. Bacteria that harbor the ethanolamine utilization pathway can use ethanolamine as a source of carbon and nitrogen. For more information on the ethanolamine utilization pathway, please see IPR009194 from INTERPRO, IPR012408 from INTERPRO.
Probab=23.69 E-value=60 Score=29.80 Aligned_cols=26 Identities=27% Similarity=0.498 Sum_probs=23.3
Q ss_pred CCHHHHHHHHHHHHHHcCCCCCCccE
Q psy4744 236 FNQASLVEFFTNFYQKARVNPGQVDF 261 (270)
Q Consensus 236 ~~~~~~~~a~~~al~~agi~~~did~ 261 (270)
-+.+++.+-+++-|++||++|+||+-
T Consensus 60 ID~~al~~iv~~eY~~Agi~p~~I~T 85 (473)
T PF06277_consen 60 IDAEALKEIVEEEYRKAGITPEDIDT 85 (473)
T ss_pred cCHHHHHHHHHHHHHHcCCCHHHCcc
Confidence 36788999999999999999999984
No 268
>TIGR03723 bact_gcp putative glycoprotease GCP. This model represents bacterial members of a protein family that is widely distributed. In a few pathogenic species, the protein is exported in a way that may represent an exceptional secondary function. This model plus companion (archaeal) model TIGR03722 together span the prokaryotic member sequences of TIGR00329, a protein family that appears universal in life, and whose broad function is unknown. A member of TIGR03722 has been characterized as a DNA-binding protein with apurinic endopeptidase activity. In contrast, the rare characterized members of the present family show O-sialoglycoprotein endopeptidase (EC. 3.4.24.57) activity after export. These include glycoprotease (gcp) from Pasteurella haemolytica A1 and a cohemolysin from Riemerella anatipestifer (GB|AAG39646.1). The member from Staphylococcus aureus is essential and is related to cell wall dynamics and the modulation of autolysis, but members are also found in the Mycoplasmas
Probab=23.00 E-value=1.9e+02 Score=25.09 Aligned_cols=71 Identities=15% Similarity=0.175 Sum_probs=40.7
Q ss_pred CCCHHHHhhcChHHHHHHHHHHHHHHHCCCCCCCCCCCCeEEEEccCCCCccccccCccccchhhHhhhhhhhHHHHHHH
Q psy4744 39 SLHSRLANVLDPLVRCFIEPCFEAILDAGINPKSLAGSNSSVYTNSCISDDESLGCDERLTTNFWLLAHVRCLLANRIAY 118 (270)
Q Consensus 39 ~~~~~~~~~~~~~~~l~l~a~~~Al~dAg~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~ 118 (270)
++.|....+. -.+.....+.++|+++|+...+++ ++.++.+.+.+..+ ...-..+.-++.
T Consensus 39 Gi~p~~~~~~--H~~~l~~~i~~~l~~~~~~~~~id----~iav~~GPGsftgl--------------rig~~~Ak~la~ 98 (314)
T TIGR03723 39 GVVPELASRA--HLEAIPPLIEEALAEAGLTLSDID----AIAVTAGPGLIGAL--------------LVGVSFAKALAL 98 (314)
T ss_pred CcCcchhHHH--HHHHHHHHHHHHHHHcCCCHHHCC----EEEEecCCChHHhH--------------HHHHHHHHHHHH
Confidence 3444443322 345667788999999999888886 55555544433221 112234445666
Q ss_pred HcCCCCCCccccc
Q psy4744 119 LFDLKGPSFTIDN 131 (270)
Q Consensus 119 ~~gl~Gp~~~v~~ 131 (270)
.++. |.+.|++
T Consensus 99 ~~~~--p~~~v~h 109 (314)
T TIGR03723 99 ALNK--PLIGVNH 109 (314)
T ss_pred HhCC--CEEeccc
Confidence 6654 6666654
No 269
>cd00828 elong_cond_enzymes "elongating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type I and II and polyketide synthases.They are characterized by the utlization of acyl carrier protein (ACP) thioesters as primer substrates, as well as the nature of their active site residues.
Probab=22.66 E-value=3.5e+02 Score=24.03 Aligned_cols=22 Identities=18% Similarity=0.256 Sum_probs=17.6
Q ss_pred HHHHHHHHHHHHHCCCCCCCCC
Q psy4744 53 RCFIEPCFEAILDAGINPKSLA 74 (270)
Q Consensus 53 ~l~l~a~~~Al~dAg~~~~~~~ 74 (270)
+-...++++||++||+++++++
T Consensus 274 ~~~~~a~~~Al~~Agi~~~dId 295 (407)
T cd00828 274 KGIARAIRTALAKAGLSLDDLD 295 (407)
T ss_pred HHHHHHHHHHHHHcCCCHHHcC
Confidence 4456788999999999887764
No 270
>PRK08947 fadA 3-ketoacyl-CoA thiolase; Reviewed
Probab=22.13 E-value=61 Score=29.00 Aligned_cols=27 Identities=7% Similarity=0.246 Sum_probs=23.0
Q ss_pred HHHHHHHHHHHHHH-cCCCCCCccEEEc
Q psy4744 238 QASLVEFFTNFYQK-ARVNPGQVDFLEA 264 (270)
Q Consensus 238 ~~~~~~a~~~al~~-agi~~~did~v~~ 264 (270)
.+-...+++++|++ +||+++|||.+..
T Consensus 28 ~~L~~~~~~~al~~~agl~~~~Id~vi~ 55 (387)
T PRK08947 28 EDLSAHLMRSLLARNPALDPAEIDDIIW 55 (387)
T ss_pred HHHHHHHHHHHHHhccCcChHHhCeEEE
Confidence 56678899999997 7999999998753
No 271
>KOG1394|consensus
Probab=21.57 E-value=69 Score=28.36 Aligned_cols=26 Identities=27% Similarity=0.368 Sum_probs=20.6
Q ss_pred ChHHHHHHHHHHHHHHHCCCCCCCCC
Q psy4744 49 DPLVRCFIEPCFEAILDAGINPKSLA 74 (270)
Q Consensus 49 ~~~~~l~l~a~~~Al~dAg~~~~~~~ 74 (270)
+|.-.=+..+...||+|||+++.+++
T Consensus 297 ~~dG~Ga~~am~raL~~Agl~pe~i~ 322 (440)
T KOG1394|consen 297 DPDGAGAVLAMERALKDAGLSPEDID 322 (440)
T ss_pred CCCcchHHHHHHHHHHHcCCChhhcC
Confidence 34445567788999999999998876
No 272
>PF09887 DUF2114: Uncharacterized protein conserved in archaea (DUF2114); InterPro: IPR008303 There are currently no experimental data for members of this group or their homologues. The exact function of this protein is unknown, but likely is linked to methanogenesis or a process closely connected to it.
Probab=21.51 E-value=1.2e+02 Score=27.07 Aligned_cols=25 Identities=16% Similarity=0.230 Sum_probs=20.9
Q ss_pred HHHHHHHHHHHHHcCCCCC-CccEEE
Q psy4744 239 ASLVEFFTNFYQKARVNPG-QVDFLE 263 (270)
Q Consensus 239 ~~~~~a~~~al~~agi~~~-did~v~ 263 (270)
+...+.+.+++++|+++.+ |+|||.
T Consensus 69 elVrdtl~e~~k~A~l~i~~DL~FVV 94 (448)
T PF09887_consen 69 ELVRDTLLESHKKAHLDIKKDLDFVV 94 (448)
T ss_pred HHHHHHHHHHHHHcCCCccccceEEE
Confidence 3457788899999999987 999985
No 273
>PRK11530 hypothetical protein; Provisional
Probab=21.48 E-value=40 Score=26.31 Aligned_cols=18 Identities=17% Similarity=0.434 Sum_probs=16.0
Q ss_pred HHHcCCCCCCccEEEccc
Q psy4744 249 YQKARVNPGQVDFLEADG 266 (270)
Q Consensus 249 l~~agi~~~did~v~~hg 266 (270)
|.-.|++|+++.||-.|+
T Consensus 156 LrLsGitPeQLGfVRvH~ 173 (183)
T PRK11530 156 LRLSGITPEQLGFVRIHD 173 (183)
T ss_pred EEeCCCCHHHcceEEEee
Confidence 456799999999999997
No 274
>COG2377 Predicted molecular chaperone distantly related to HSP70-fold metalloproteases [Posttranslational modification, protein turnover, chaperones]
Probab=21.45 E-value=86 Score=27.77 Aligned_cols=26 Identities=8% Similarity=0.208 Sum_probs=24.1
Q ss_pred HHHHHHHHHHHcCCCCCCccEEEccc
Q psy4744 241 LVEFFTNFYQKARVNPGQVDFLEADG 266 (270)
Q Consensus 241 ~~~a~~~al~~agi~~~did~v~~hg 266 (270)
...+++..|++-++.++||+.|-+||
T Consensus 75 ~a~av~~ll~~~~l~~~~i~~iG~HG 100 (371)
T COG2377 75 HAQAVAALLAEQGLLPRDIRAIGCHG 100 (371)
T ss_pred HHHHHHHHHHHcCCCHHhCceeecCC
Confidence 47789999999999999999999998
No 275
>PF09663 Amido_AtzD_TrzD: Amidohydrolase ring-opening protein (Amido_AtzD_TrzD); InterPro: IPR014086 Members of this family are ring-opening amidohydrolases, including cyanuric acid amidohydrolase (3.5.2.15 from EC) (AtzD and TrzD) and barbiturase. Note that barbiturase does not act as defined for 3.5.2.1 from EC (barbiturate + water = malonate + urea) but rather catalyses the ring opening of barbiturase acid to ureidomalonic acid [].; GO: 0016812 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
Probab=21.32 E-value=96 Score=27.19 Aligned_cols=33 Identities=21% Similarity=0.279 Sum_probs=23.9
Q ss_pred CCHHHHhhcChHHHHHHHHHHHHHHHCCC-CCCCC
Q psy4744 40 LHSRLANVLDPLVRCFIEPCFEAILDAGI-NPKSL 73 (270)
Q Consensus 40 ~~~~~~~~~~~~~~l~l~a~~~Al~dAg~-~~~~~ 73 (270)
+.|+++.++ .+.+....++++|+.+||+ ++.|+
T Consensus 120 ~~PEeiGr~-aqV~~vA~aV~~aM~~AGI~dpaDV 153 (365)
T PF09663_consen 120 FLPEEIGRM-AQVEEVAAAVRAAMADAGITDPADV 153 (365)
T ss_pred CChHHcCcH-HHHHHHHHHHHHHHHHcCCCChhhe
Confidence 456665544 4667778899999999999 55554
No 276
>COG0443 DnaK Molecular chaperone [Posttranslational modification, protein turnover, chaperones]
Probab=21.25 E-value=1e+02 Score=29.34 Aligned_cols=30 Identities=13% Similarity=0.244 Sum_probs=26.0
Q ss_pred HHHHHHHHHHHcCCCCCCccEEEcccCCCC
Q psy4744 241 LVEFFTNFYQKARVNPGQVDFLEADGSAIK 270 (270)
Q Consensus 241 ~~~a~~~al~~agi~~~did~v~~hgtgt~ 270 (270)
..+-++++|+++++++.||+.|.+.|-+|+
T Consensus 292 ~~~~~~~al~~a~l~~~~I~~VilvGGstr 321 (579)
T COG0443 292 TIEPVEQALKDAGLEKSDIDLVILVGGSTR 321 (579)
T ss_pred HHHHHHHHHHHcCCChhhCceEEEccceec
Confidence 456678999999999999999999998764
No 277
>COG2971 Predicted N-acetylglucosamine kinase [Carbohydrate transport and metabolism]
Probab=21.15 E-value=1.1e+02 Score=26.37 Aligned_cols=26 Identities=8% Similarity=0.215 Sum_probs=22.4
Q ss_pred HHHHHHHHHHHHHHcCCCCCCccEEE
Q psy4744 238 QASLVEFFTNFYQKARVNPGQVDFLE 263 (270)
Q Consensus 238 ~~~~~~a~~~al~~agi~~~did~v~ 263 (270)
...+.+++++++.++|++|++|+..-
T Consensus 48 ~~ni~~ai~~A~~~aG~~~~~i~~~~ 73 (301)
T COG2971 48 VRNIKDAIREALDEAGLKPDEIAAIV 73 (301)
T ss_pred HHHHHHHHHHHHHhcCCCHHHhCcee
Confidence 45678999999999999999998754
No 278
>COG0533 QRI7 Metal-dependent proteases with possible chaperone activity [Posttranslational modification, protein turnover, chaperones]
Probab=20.93 E-value=3.3e+02 Score=24.03 Aligned_cols=38 Identities=18% Similarity=0.196 Sum_probs=27.6
Q ss_pred cccCCCCHHHHhhcChHHHHHHHHHHHHHHHCCCCCCCCC
Q psy4744 35 QTFFSLHSRLANVLDPLVRCFIEPCFEAILDAGINPKSLA 74 (270)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~l~l~a~~~Al~dAg~~~~~~~ 74 (270)
..+-++-|+.+.+.. .+......++||++||++..++|
T Consensus 36 ~~~GGVvPe~Asr~H--~e~i~~li~~al~eA~~~~~dID 73 (342)
T COG0533 36 ARYGGVVPELASRHH--VENIPPLIEEALAEAGVSLEDID 73 (342)
T ss_pred CCCCCcCccHHHHHH--HHHHHHHHHHHHHHcCCCcccCC
Confidence 333377787776542 35566678999999999988887
No 279
>PF14518 Haem_oxygenas_2: Iron-containing redox enzyme; PDB: 3BJD_B.
Probab=20.90 E-value=52 Score=23.01 Aligned_cols=26 Identities=0% Similarity=0.137 Sum_probs=17.5
Q ss_pred HHHHHHHHHHHcCCCCCCccEEEccc
Q psy4744 241 LVEFFTNFYQKARVNPGQVDFLEADG 266 (270)
Q Consensus 241 ~~~a~~~al~~agi~~~did~v~~hg 266 (270)
..+.+.++|++.|++.+++.|+..|-
T Consensus 80 ~~~~~~~~l~r~g~~~~~~~yf~~H~ 105 (106)
T PF14518_consen 80 IYRRLIKGLRRLGLDEEDLEYFDLHI 105 (106)
T ss_dssp HHHHHHHHHHHTT--TTTTHHHHTTH
T ss_pred HHHHHHHHHHHcCCCccccchhhhcc
Confidence 35566678888888888888877773
No 280
>KOG0102|consensus
Probab=20.41 E-value=2.8e+02 Score=26.21 Aligned_cols=93 Identities=19% Similarity=0.223 Sum_probs=57.4
Q ss_pred CCHHHHhhcC-hHHHHHHHHHHHHHHHCCCCCCCCCCCCeEEEEccCCCCccccccCccccchhhHhhhhhhhHHHHHHH
Q psy4744 40 LHSRLANVLD-PLVRCFIEPCFEAILDAGINPKSLAGSNSSVYTNSCISDDESLGCDERLTTNFWLLAHVRCLLANRIAY 118 (270)
Q Consensus 40 ~~~~~~~~~~-~~~~l~l~a~~~Al~dAg~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~ 118 (270)
++..+.+.+. +...-.++-+..||+||+++.++++.. +.+|.. . -.+-+...+..
T Consensus 320 ~tr~efe~~v~~lI~Rti~p~~~aL~dA~~~~~di~EV---~lvggm-t--------------------rmpkv~s~V~e 375 (640)
T KOG0102|consen 320 LTRGEFEELVPSLIARTIEPCKKALRDASLSSSDINEV---ILVGGM-T--------------------RMPKVQSTVKE 375 (640)
T ss_pred ecHHHHHHhhHHHHHhhhhHHHHHHHhccCChhhhhhh---hhhcch-h--------------------hcHHHHHHHHH
Confidence 3455555443 345566788999999999998888741 111110 0 01234455777
Q ss_pred HcCCCCCCccccccchhHHHHHHHHHHHHhcCCCCEEEEee
Q psy4744 119 LFDLKGPSFTIDNSWTGGIEVLRQAVQDISEGRVDTAIVGV 159 (270)
Q Consensus 119 ~~gl~Gp~~~v~~~cas~~~al~~A~~~i~~G~~d~~lv~g 159 (270)
+||- +|+-.|+...++.+-|-..+ -+..|+..-++..-
T Consensus 376 ~fgk-~p~~~vnPdeava~GAaiqg--gvl~geVkdvlLLd 413 (640)
T KOG0102|consen 376 LFGK-GPSKGVNPDEAVAGGAAIQG--GVLSGEVKDVLLLD 413 (640)
T ss_pred HhCC-CCCCCcCCcchhccchhhcc--chhhccccceeeee
Confidence 7765 68888888776655544333 46778877766643
No 281
>PRK06519 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=20.34 E-value=6.4e+02 Score=22.68 Aligned_cols=20 Identities=20% Similarity=-0.016 Sum_probs=16.0
Q ss_pred chhHHHHHHHHHHHHhcCCC
Q psy4744 133 WTGGIEVLRQAVQDISEGRV 152 (270)
Q Consensus 133 cas~~~al~~A~~~i~~G~~ 152 (270)
.++|...+..+..+|+.|..
T Consensus 340 ~AAGa~e~i~~~lal~~g~v 359 (398)
T PRK06519 340 EAQFPLGLALAALSVSKGAL 359 (398)
T ss_pred HHHHHHHHHHHHHHHhcCcc
Confidence 56777888888999999853
No 282
>PRK14878 UGMP family protein; Provisional
Probab=20.32 E-value=3.4e+02 Score=23.58 Aligned_cols=72 Identities=19% Similarity=0.216 Sum_probs=41.3
Q ss_pred CCCHHHHhhcChHHHHHHHHHHHHHHHCCCCCCCCCCCCeEEEEccCCCCccccccCccccchhhHhhhhhhhHHHHHHH
Q psy4744 39 SLHSRLANVLDPLVRCFIEPCFEAILDAGINPKSLAGSNSSVYTNSCISDDESLGCDERLTTNFWLLAHVRCLLANRIAY 118 (270)
Q Consensus 39 ~~~~~~~~~~~~~~~l~l~a~~~Al~dAg~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~ 118 (270)
++.|+.+.+... +....+..++|+++|+++.+++ .+.++...+.+..+ ......+..++.
T Consensus 34 g~~p~~~~~~h~--~~l~~~i~~~l~~a~~~~~did----~Iavt~gPG~~~~l--------------rvg~~~Ak~la~ 93 (323)
T PRK14878 34 GIHPREAAQHHA--EVAPELLRKALEKAGISIEDID----AVAVSQGPGLGPAL--------------RVGATAARALAL 93 (323)
T ss_pred CcCccHHHHHHH--HHHHHHHHHHHHHcCCCHHHCC----EEEEecCCCcccch--------------HHHHHHHHHHHH
Confidence 455555443322 3444788999999999988887 45554443322111 112234666777
Q ss_pred HcCCCCCCcccccc
Q psy4744 119 LFDLKGPSFTIDNS 132 (270)
Q Consensus 119 ~~gl~Gp~~~v~~~ 132 (270)
.++. |...|+.-
T Consensus 94 ~~~~--p~~~v~h~ 105 (323)
T PRK14878 94 KYNK--PLVPVNHC 105 (323)
T ss_pred HhCC--CccccchH
Confidence 7766 55555553
No 283
>PF14574 DUF4445: Domain of unknown function (DUF4445); PDB: 3ZYY_X.
Probab=20.25 E-value=1.1e+02 Score=27.83 Aligned_cols=28 Identities=18% Similarity=0.287 Sum_probs=19.4
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEccc
Q psy4744 239 ASLVEFFTNFYQKARVNPGQVDFLEADG 266 (270)
Q Consensus 239 ~~~~~a~~~al~~agi~~~did~v~~hg 266 (270)
.++...++..|+++|++++||+.|..-|
T Consensus 308 aAi~aGi~~Ll~~agi~~~di~~v~lAG 335 (412)
T PF14574_consen 308 AAIRAGIEILLEEAGISPEDIDRVYLAG 335 (412)
T ss_dssp HHHHHHHHHHHHHTT--GGG--EEEEEC
T ss_pred HHHHHHHHHHHHHcCCCHHHccEEEEeC
Confidence 3456778889999999999999988655
No 284
>PRK05952 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=20.24 E-value=4.2e+02 Score=23.61 Aligned_cols=81 Identities=12% Similarity=0.107 Sum_probs=43.9
Q ss_pred hHHHHHHHHHHHHHHHCCCCCCCCCCCCeEEEEccCCCCccccccCccccchhhHhhhhhhhHHHHHHHHcCCCCCCcc-
Q psy4744 50 PLVRCFIEPCFEAILDAGINPKSLAGSNSSVYTNSCISDDESLGCDERLTTNFWLLAHVRCLLANRIAYLFDLKGPSFT- 128 (270)
Q Consensus 50 ~~~~l~l~a~~~Al~dAg~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl~Gp~~~- 128 (270)
+...-...++++||+++|+++++++ .+-....+.... ++.. ..-+...|+-+-|...
T Consensus 251 ~~~~~~~~ai~~Al~~agi~p~dId-----~i~~hgtgt~~~--------D~~E---------~~al~~~fg~~~~v~s~ 308 (381)
T PRK05952 251 PDGKSAIAAIQQCLARSGLTPEDID-----YIHAHGTATRLN--------DQRE---------ANLIQALFPHRVAVSST 308 (381)
T ss_pred CCHHHHHHHHHHHHHHhCCCHHHee-----EEEccCCCCCCC--------cHHH---------HHHHHHHcCCCCeeecc
Confidence 3455677899999999999876654 333322221100 0000 1113334431111111
Q ss_pred ---cc-ccchhHHHHHHHHHHHHhcCCC
Q psy4744 129 ---ID-NSWTGGIEVLRQAVQDISEGRV 152 (270)
Q Consensus 129 ---v~-~~cas~~~al~~A~~~i~~G~~ 152 (270)
+. +..++|...+..+..+|+.|..
T Consensus 309 K~~~GH~~~AaG~~~~~~~~~~l~~~~i 336 (381)
T PRK05952 309 KGATGHTLGASGALGVAFSLLALRHQQL 336 (381)
T ss_pred hhhhccChHHHHHHHHHHHHHHHhcCcc
Confidence 11 2357788888889999999863
Done!