BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy4746
(314 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8MJD7|CNGB3_CANFA Cyclic nucleotide-gated cation channel beta-3 OS=Canis familiaris
GN=CNGB3 PE=1 SV=1
Length = 782
Score = 206 bits (523), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 97/217 (44%), Positives = 144/217 (66%), Gaps = 1/217 (0%)
Query: 98 VTLSYLYNCFVIPLRVTFPYQTRSNLITWFVFDYVMDVIYILDLLLIKPRLIYLDDGFWI 157
VT++Y +NC++IPLR+ FPYQT N WF+ D D+IY+ D+LLI+PRL ++ G +
Sbjct: 220 VTIAYNWNCWLIPLRLVFPYQTPDNTHYWFITDITCDIIYLCDMLLIQPRLQFIKGGDIM 279
Query: 158 KDSKLTRIQYRRKLQYKNDLLSLMPFDLLYFVFGFECTFLRLPRLIKIQTFWEFCNHFDS 217
DS + YR +++ D+ S+MPFD+ Y FGF F R+ R++K +F+EF +H +S
Sbjct: 280 VDSNELKRHYRSSTKFQLDVASVMPFDVFYLFFGFNPVF-RMNRILKYTSFFEFNHHLES 338
Query: 218 VLASPYVVRVARTLTYMIYLVHLNACAYYEISVREGLGINSWVYDGKGNAYIRCFYFATK 277
++ Y+ RV RT Y++Y +H+NAC YY S EG+G WVY+G+GN Y+RC+Y+A +
Sbjct: 339 IMDKAYIYRVIRTTGYLLYTLHINACIYYWASDYEGIGSTKWVYNGEGNKYLRCYYWAVR 398
Query: 278 TATSIGKNPRPTNEMEYVFMTVSWLLGVFVFAVLIGQ 314
T +IG P P E VF +++ GVFVF+ LIGQ
Sbjct: 399 TLITIGGLPEPQTSFEIVFQLLNFFSGVFVFSSLIGQ 435
Score = 52.4 bits (124), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 61/135 (45%), Gaps = 11/135 (8%)
Query: 33 SQIRDIIATATKGQTEYRKLMDETLDYLRRLNVPPRIRERVKQWFSFTWEQQHTLGYWYI 92
Q++D+I AT Q +R MD T+ Y+ ++P ++ RV+ W+ +TW+ Q L +
Sbjct: 434 GQMQDVIGAATANQNNFRISMDHTISYMNTYSIPKNVQNRVRTWYEYTWDSQRMLDESDL 493
Query: 93 SWLCLVTLSYLYNCFVIPLRVTFPYQTRSNLITWFVFDYVMDVIYILDLLLIKPRLIYLD 152
LC + ++ +++ ++I+ D I D+LL +YL
Sbjct: 494 --LCTLPVT---------MQLALTVDVNLSIISKVELFKGCDTQMIYDMLLRLKSTVYLP 542
Query: 153 DGFWIKDSKLTRIQY 167
F K ++ + Y
Sbjct: 543 GDFVCKKGEIGKEMY 557
>sp|Q9JJZ9|CNGB3_MOUSE Cyclic nucleotide-gated cation channel beta-3 OS=Mus musculus
GN=Cngb3 PE=1 SV=1
Length = 694
Score = 206 bits (523), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 100/224 (44%), Positives = 148/224 (66%), Gaps = 1/224 (0%)
Query: 91 YISWLCLVTLSYLYNCFVIPLRVTFPYQTRSNLITWFVFDYVMDVIYILDLLLIKPRLIY 150
Y+ WL LVT++Y +NC+++P+R+ FP QT N W + D V D+IY+ D+LLI+PRL +
Sbjct: 210 YLLWLLLVTIAYNWNCWLLPVRLVFPCQTPDNKNYWIITDIVCDIIYLCDILLIQPRLQF 269
Query: 151 LDDGFWIKDSKLTRIQYRRKLQYKNDLLSLMPFDLLYFVFGFECTFLRLPRLIKIQTFWE 210
+ G I DS + YR +++ D+ SL+PF++LY FG F R R++K +F+E
Sbjct: 270 VRGGEIIVDSNELKRNYRSSTKFRMDVASLLPFEVLYIFFGVNPIF-RANRILKYTSFFE 328
Query: 211 FCNHFDSVLASPYVVRVARTLTYMIYLVHLNACAYYEISVREGLGINSWVYDGKGNAYIR 270
F +H +S++ YV RV RT Y+++L+H+NAC YY S EG+G WVY+G+GN Y+R
Sbjct: 329 FNHHLESIMDKAYVYRVIRTTGYLLFLLHINACVYYWASDYEGIGSTKWVYNGEGNKYLR 388
Query: 271 CFYFATKTATSIGKNPRPTNEMEYVFMTVSWLLGVFVFAVLIGQ 314
CFY+A +T +IG P P E VF +++ GVFVF+ LIGQ
Sbjct: 389 CFYWAVRTLITIGGLPEPQTSFEIVFQFLNFFSGVFVFSSLIGQ 432
Score = 48.9 bits (115), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 55/135 (40%), Gaps = 11/135 (8%)
Query: 33 SQIRDIIATATKGQTEYRKLMDETLDYLRRLNVPPRIRERVKQWFSFTWEQQHTLGYWYI 92
Q+RD+I AT Q ++ MD + Y+ + ++P ++ RV+ W +TW Q L
Sbjct: 431 GQMRDVIGAATANQNYFQACMDHIIAYMNKYSIPQSVQYRVRTWLEYTWNSQRILDE--- 487
Query: 93 SWLCLVTLSYLYNCFVIPLRVTFPYQTRSNLITWFVFDYVMDVIYILDLLLIKPRLIYLD 152
S L ++++ ++I D I DLLL IYL
Sbjct: 488 --------SNLLENLPTAMQLSIALDINFSIIDKVELFKGCDTQMIYDLLLRLKSTIYLP 539
Query: 153 DGFWIKDSKLTRIQY 167
F K ++ + Y
Sbjct: 540 GDFVCKKGEIGKEMY 554
>sp|Q28181|CNGB1_BOVIN Cyclic nucleotide-gated cation channel beta-1 OS=Bos taurus
GN=CNGB1 PE=1 SV=1
Length = 1394
Score = 205 bits (522), Expect = 3e-52, Method: Composition-based stats.
Identities = 105/224 (46%), Positives = 144/224 (64%), Gaps = 1/224 (0%)
Query: 91 YISWLCLVTLSYLYNCFVIPLRVTFPYQTRSNLITWFVFDYVMDVIYILDLLLIKPRLIY 150
YI WL V L++ +NC++IP+R FPYQT N+ W + DY+ D+IY+LD+ + + RL +
Sbjct: 770 YILWLFFVVLAWNWNCWLIPVRWAFPYQTPDNIHLWLLMDYLCDLIYLLDITVFQMRLQF 829
Query: 151 LDDGFWIKDSKLTRIQYRRKLQYKNDLLSLMPFDLLYFVFGFECTFLRLPRLIKIQTFWE 210
+ G I D K R Y + ++K D+L L+P DLLY FG LRLPR +K F+E
Sbjct: 830 VRGGDIITDKKEMRNNYVKSQRFKMDMLCLLPLDLLYLKFGVN-PLLRLPRCLKYMAFFE 888
Query: 211 FCNHFDSVLASPYVVRVARTLTYMIYLVHLNACAYYEISVREGLGINSWVYDGKGNAYIR 270
F N +S+L+ YV RV RT Y++Y +HLN+C YY S EGLG WVYDG GN+YIR
Sbjct: 889 FNNRLESILSKAYVYRVIRTTAYLLYSLHLNSCLYYWASAYEGLGSTHWVYDGVGNSYIR 948
Query: 271 CFYFATKTATSIGKNPRPTNEMEYVFMTVSWLLGVFVFAVLIGQ 314
C+Y+A KT +IG P P E VF +++ GVF F+V+IGQ
Sbjct: 949 CYYWAVKTLITIGGLPDPRTLFEIVFQGLNYFTGVFAFSVMIGQ 992
Score = 61.6 bits (148), Expect = 8e-09, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 33/54 (61%)
Query: 34 QIRDIIATATKGQTEYRKLMDETLDYLRRLNVPPRIRERVKQWFSFTWEQQHTL 87
Q+RD++ AT GQT YR MD T+ Y+ +P ++ RVK W+ +TW Q L
Sbjct: 992 QMRDVVGAATAGQTYYRSCMDSTVKYMNFYKIPRSVQNRVKTWYEYTWHSQGML 1045
>sp|Q14028|CNGB1_HUMAN Cyclic nucleotide-gated cation channel beta-1 OS=Homo sapiens
GN=CNGB1 PE=1 SV=2
Length = 1251
Score = 202 bits (515), Expect = 2e-51, Method: Composition-based stats.
Identities = 102/224 (45%), Positives = 142/224 (63%), Gaps = 1/224 (0%)
Query: 91 YISWLCLVTLSYLYNCFVIPLRVTFPYQTRSNLITWFVFDYVMDVIYILDLLLIKPRLIY 150
Y+ WL V +++ +NC++IP+R FPYQT N+ W + DY+ D+IY LD+ + + RL +
Sbjct: 656 YVLWLFFVVMAWNWNCWLIPVRWAFPYQTPDNIHHWLLMDYLCDLIYFLDITVFQTRLQF 715
Query: 151 LDDGFWIKDSKLTRIQYRRKLQYKNDLLSLMPFDLLYFVFGFECTFLRLPRLIKIQTFWE 210
+ G I D K R Y + ++K DLLSL+P D LY G LRLPR +K F+E
Sbjct: 716 VRGGDIITDKKDMRNNYLKSRRFKMDLLSLLPLDFLYLKVGVN-PLLRLPRCLKYMAFFE 774
Query: 211 FCNHFDSVLASPYVVRVARTLTYMIYLVHLNACAYYEISVREGLGINSWVYDGKGNAYIR 270
F + +S+L+ YV RV RT Y++Y +HLN+C YY S +GLG WVYDG GN+YIR
Sbjct: 775 FNSRLESILSKAYVYRVIRTTAYLLYSLHLNSCLYYWASAYQGLGSTHWVYDGVGNSYIR 834
Query: 271 CFYFATKTATSIGKNPRPTNEMEYVFMTVSWLLGVFVFAVLIGQ 314
C+YFA KT +IG P P E VF +++ GVF F+V+IGQ
Sbjct: 835 CYYFAVKTLITIGGLPDPKTLFEIVFQLLNYFTGVFAFSVMIGQ 878
Score = 62.0 bits (149), Expect = 6e-09, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 33/54 (61%)
Query: 34 QIRDIIATATKGQTEYRKLMDETLDYLRRLNVPPRIRERVKQWFSFTWEQQHTL 87
Q+RD++ AT GQT YR MD T+ Y+ +P ++ RVK W+ +TW Q L
Sbjct: 878 QMRDVVGAATAGQTYYRSCMDSTVKYMNFYKIPKSVQNRVKTWYEYTWHSQGML 931
>sp|Q9NQW8|CNGB3_HUMAN Cyclic nucleotide-gated cation channel beta-3 OS=Homo sapiens
GN=CNGB3 PE=1 SV=2
Length = 809
Score = 197 bits (500), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 94/214 (43%), Positives = 139/214 (64%), Gaps = 1/214 (0%)
Query: 101 SYLYNCFVIPLRVTFPYQTRSNLITWFVFDYVMDVIYILDLLLIKPRLIYLDDGFWIKDS 160
+Y +NC IPLR+ FPYQT N+ W + D + D+IY+ D+L I+PRL ++ G I DS
Sbjct: 228 AYNWNCCFIPLRLVFPYQTADNIHYWLIADIICDIIYLYDMLFIQPRLQFVRGGDIIVDS 287
Query: 161 KLTRIQYRRKLQYKNDLLSLMPFDLLYFVFGFECTFLRLPRLIKIQTFWEFCNHFDSVLA 220
R YR +++ D+ S++PFD+ Y FGF F R R++K +F+EF +H +S++
Sbjct: 288 NELRKHYRTSTKFQLDVASIIPFDICYLFFGFNPMF-RANRMLKYTSFFEFNHHLESIMD 346
Query: 221 SPYVVRVARTLTYMIYLVHLNACAYYEISVREGLGINSWVYDGKGNAYIRCFYFATKTAT 280
Y+ RV RT Y+++++H+NAC YY S EG+G WVYDG+GN Y+RC+Y+A +T
Sbjct: 347 KAYIYRVIRTTGYLLFILHINACVYYWASNYEGIGTTRWVYDGEGNEYLRCYYWAVRTLI 406
Query: 281 SIGKNPRPTNEMEYVFMTVSWLLGVFVFAVLIGQ 314
+IG P P E VF +++ GVFVF+ LIGQ
Sbjct: 407 TIGGLPEPQTLFEIVFQLLNFFSGVFVFSSLIGQ 440
Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 62/135 (45%), Gaps = 11/135 (8%)
Query: 33 SQIRDIIATATKGQTEYRKLMDETLDYLRRLNVPPRIRERVKQWFSFTWEQQHTLGYWYI 92
Q+RD+I AT Q +R MD+T+ Y+ ++P +++RV+ W+ +TW+ Q L +
Sbjct: 439 GQMRDVIGAATANQNYFRACMDDTIAYMNNYSIPKLVQKRVRTWYEYTWDSQRMLDESDL 498
Query: 93 SWLCLVTLSYLYNCFVIPLRVTFPYQTRSNLITWFVFDYVMDVIYILDLLLIKPRLIYLD 152
T+ + + V F ++ +L D I D+LL ++YL
Sbjct: 499 LKTLPTTVQ-----LALAIDVNFSIISKVDLFKG------CDTQMIYDMLLRLKSVLYLP 547
Query: 153 DGFWIKDSKLTRIQY 167
F K ++ + Y
Sbjct: 548 GDFVCKKGEIGKEMY 562
>sp|Q90980|CNG3_CHICK Cyclic nucleotide-gated channel rod photoreceptor subunit alpha
OS=Gallus gallus PE=2 SV=1
Length = 645
Score = 157 bits (398), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 82/235 (34%), Positives = 131/235 (55%), Gaps = 9/235 (3%)
Query: 88 GYWYISWLCLVTLSYLYNCFVIPLRVTFPYQTRSNLITWFVFDYVMDVIYILDLLLIKPR 147
G Y +WL +T+ +YN +I R F L WF+ DYV DVIYI D+ ++ R
Sbjct: 114 GNMYYNWLFCITMPVMYNWTMIIARACFDELQNDYLAVWFIVDYVSDVIYIADMF-VRTR 172
Query: 148 LIYLDDGFWIKDSKLTRIQYRRKLQYKNDLLSLMPFDLLYFVFGFECTFLRLPRLIKIQT 207
YL+ G +K+ + + +Y+ LQ+K D LS++P DLLYF G LR+ RL+++
Sbjct: 173 TGYLEQGLLVKEEQKLKEKYKSSLQFKLDFLSIIPTDLLYFKLGLNYPELRINRLLRVAR 232
Query: 208 FWEFCNHFDSVLASPYVVRVARTLTYMIYLVHLNACAYYEISVREGLGINSWVYDGKGN- 266
+EF ++ P + R++ + Y++ ++H NAC YY IS G G ++WVY +
Sbjct: 233 MFEFFQRTETRTNYPNIFRISNLVMYIVIIIHWNACVYYSISKAIGFGADTWVYPNTSHP 292
Query: 267 -------AYIRCFYFATKTATSIGKNPRPTNEMEYVFMTVSWLLGVFVFAVLIGQ 314
Y+ Y++T T T+IG+ P P + EY F+ V +L+GV +FA ++G
Sbjct: 293 EFARLTRKYVYSLYWSTLTLTTIGETPPPVRDSEYFFVVVDFLVGVLIFATIVGN 347
>sp|Q28718|CNGA2_RABIT Cyclic nucleotide-gated olfactory channel OS=Oryctolagus cuniculus
GN=CNGA2 PE=2 SV=1
Length = 664
Score = 156 bits (394), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 83/235 (35%), Positives = 128/235 (54%), Gaps = 9/235 (3%)
Query: 88 GYWYISWLCLVTLSYLYNCFVIPLRVTFPYQTRSNLITWFVFDYVMDVIYILDLLLIKPR 147
G WY WL ++ + LYN ++ R F R + W V DY DV+YI DL I+ R
Sbjct: 137 GDWYYRWLFVIAMPVLYNWCLLVARACFSDLQRGYFLVWLVLDYFSDVVYIADLF-IRLR 195
Query: 148 LIYLDDGFWIKDSKLTRIQYRRKLQYKNDLLSLMPFDLLYFVFGFECTFLRLPRLIKIQT 207
+L+ G +KD K R Y LQ+K D+ S++P DL+YF G LR RL+
Sbjct: 196 TGFLEQGLLVKDPKKLRDNYIHTLQFKLDVASIIPTDLIYFAVGIHNPELRFNRLLHFAR 255
Query: 208 FWEFCNHFDSVLASPYVVRVARTLTYMIYLVHLNACAYYEISVREGLGINSWVYDG---- 263
+EF + ++ + P + R++ + Y++ ++H NAC YY IS G G+++WVY
Sbjct: 256 MFEFFDRTETRTSYPNIFRISNLVLYILVIIHWNACIYYAISKSIGFGVDTWVYPNITDP 315
Query: 264 ----KGNAYIRCFYFATKTATSIGKNPRPTNEMEYVFMTVSWLLGVFVFAVLIGQ 314
YI C Y++T T T+IG+ P P + EY+F+ +L+GV +FA ++G
Sbjct: 316 EYGYLAREYIYCLYWSTLTLTTIGETPPPVKDEEYLFVIFDFLIGVLIFATIVGN 370
>sp|Q62398|CNGA2_MOUSE Cyclic nucleotide-gated olfactory channel OS=Mus musculus GN=Cnga2
PE=2 SV=2
Length = 664
Score = 155 bits (391), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 81/235 (34%), Positives = 129/235 (54%), Gaps = 9/235 (3%)
Query: 88 GYWYISWLCLVTLSYLYNCFVIPLRVTFPYQTRSNLITWFVFDYVMDVIYILDLLLIKPR 147
G WY WL ++ + LYN ++ R F R+ + W V DY D +YI DL+ I+ R
Sbjct: 139 GDWYYRWLFVIAMPVLYNWCLLVARACFSDLQRNYFVVWLVLDYFSDTVYIADLI-IRLR 197
Query: 148 LIYLDDGFWIKDSKLTRIQYRRKLQYKNDLLSLMPFDLLYFVFGFECTFLRLPRLIKIQT 207
+L+ G +KD K R Y LQ+K D+ S++P DL+YF G +R RL+
Sbjct: 198 TGFLEQGLLVKDPKKLRDNYIHTLQFKLDVASIIPTDLIYFAVGIHSPEVRFNRLLHFAR 257
Query: 208 FWEFCNHFDSVLASPYVVRVARTLTYMIYLVHLNACAYYEISVREGLGINSWVYDG---- 263
+EF + ++ + P + R++ + Y++ ++H NAC YY IS G G+++WVY
Sbjct: 258 MFEFFDRTETRTSYPNIFRISNLVLYILVIIHWNACIYYAISKSIGFGVDTWVYPNITDP 317
Query: 264 ----KGNAYIRCFYFATKTATSIGKNPRPTNEMEYVFMTVSWLLGVFVFAVLIGQ 314
YI C Y++T T T+IG+ P P + EY+F+ +L+GV +FA ++G
Sbjct: 318 EYGYLAREYIYCLYWSTLTLTTIGETPPPVKDEEYLFVIFDFLIGVLIFATIVGN 372
>sp|Q62927|CNGA1_RAT cGMP-gated cation channel alpha-1 OS=Rattus norvegicus GN=Cnga1
PE=2 SV=1
Length = 683
Score = 155 bits (391), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 85/235 (36%), Positives = 133/235 (56%), Gaps = 9/235 (3%)
Query: 88 GYWYISWLCLVTLSYLYNCFVIPLRVTFPYQTRSNLITWFVFDYVMDVIYILDLLLIKPR 147
G Y +WL +TL +YN +I R F L W +FDYV DV+Y+ D+ ++ R
Sbjct: 153 GNMYYNWLFCITLPVMYNWTMIIARACFDELQSDYLEYWLIFDYVSDVVYLADMF-VRTR 211
Query: 148 LIYLDDGFWIKDSKLTRIQYRRKLQYKNDLLSLMPFDLLYFVFGFECTFLRLPRLIKIQT 207
YL+ G +KD +Y+ LQ+K D+LS++P DLLYF FG+ +RL RL++I
Sbjct: 212 TGYLEQGLLVKDELKLIEKYKANLQFKLDVLSVIPTDLLYFKFGWNYPEIRLNRLLRISR 271
Query: 208 FWEFCNHFDSVLASPYVVRVARTLTYMIYLVHLNACAYYEISVREGLGINSWVYDGKGN- 266
+EF ++ P + R++ + Y++ ++H NAC YY IS G G ++WVY +
Sbjct: 272 MFEFFQRTETRTNYPNIFRISNLVMYIVIIIHWNACVYYSISKAIGFGNDTWVYPDVNDP 331
Query: 267 -------AYIRCFYFATKTATSIGKNPRPTNEMEYVFMTVSWLLGVFVFAVLIGQ 314
Y+ Y++T T T+IG+ P P + EYVF+ V +L+GV +FA ++G
Sbjct: 332 EFGRLARKYVYSLYWSTLTLTTIGETPPPVLDSEYVFVVVDFLIGVLIFATIVGN 386
Score = 31.6 bits (70), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 13/56 (23%), Positives = 26/56 (46%)
Query: 32 CSQIRDIIATATKGQTEYRKLMDETLDYLRRLNVPPRIRERVKQWFSFTWEQQHTL 87
I +I+ + E++ +D Y+ NV + +RV +WF + W + T+
Sbjct: 384 VGNIGSMISNMNAARAEFQSRVDAIKQYMNFRNVSKDMEKRVIKWFDYLWTNKKTV 439
>sp|P55934|CNG_ICTPU Cyclic nucleotide-gated cation channel OS=Ictalurus punctatus PE=2
SV=1
Length = 682
Score = 155 bits (391), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 89/244 (36%), Positives = 134/244 (54%), Gaps = 9/244 (3%)
Query: 74 KQWFSFTWEQQHTLGYWYISWLCLVTLSYLYNCFVIPLRVTFPYQTRSNLITWFVFDYVM 133
++W F Q + Y+ WL + L+ LYN ++ R F N W DY+
Sbjct: 124 ERWEGFVVSQSDDIYYY---WLFFIALASLYNWIMLVARACFDQLQDENFFLWVGLDYLC 180
Query: 134 DVIYILDLLLIKPRLIYLDDGFWIKDSKLTRIQYRRKLQYKNDLLSLMPFDLLYFVFGFE 193
DVIYILD I+ R YL+ G +KD R Y R LQ+K D LS++P +LL+FV G+
Sbjct: 181 DVIYILDTC-IRLRTGYLEQGLLVKDLAKLRDNYIRTLQFKLDFLSILPTELLFFVTGY- 238
Query: 194 CTFLRLPRLIKIQTFWEFCNHFDSVLASPYVVRVARTLTYMIYLVHLNACAYYEISVREG 253
LR RL++ +EF + ++ P R+ + Y++ ++H NAC YY IS G
Sbjct: 239 VPQLRFNRLLRFSRMFEFFDRTETRTNYPNAFRICNLILYILVIIHWNACIYYAISKALG 298
Query: 254 LGINSWVYDGKGNA----YIRCFYFATKTATSIGKNPRPTNEMEYVFMTVSWLLGVFVFA 309
L ++WVY G+ Y+ CFY++T T T+IG+ P P + EYVF+ +L+GV +FA
Sbjct: 299 LSSDTWVYSGQNKTLSFCYVYCFYWSTLTLTTIGEMPPPVKDEEYVFVVFDFLVGVLIFA 358
Query: 310 VLIG 313
++G
Sbjct: 359 TIVG 362
>sp|Q00195|CNGA2_RAT Cyclic nucleotide-gated olfactory channel OS=Rattus norvegicus
GN=Cnga2 PE=2 SV=1
Length = 664
Score = 154 bits (389), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 81/235 (34%), Positives = 129/235 (54%), Gaps = 9/235 (3%)
Query: 88 GYWYISWLCLVTLSYLYNCFVIPLRVTFPYQTRSNLITWFVFDYVMDVIYILDLLLIKPR 147
G WY WL ++ + LYN ++ R F R+ + W V DY D +YI DL+ I+ R
Sbjct: 139 GDWYYRWLFVIAMPVLYNWCLLVARACFSDLQRNYFVVWLVLDYFSDTVYIADLI-IRLR 197
Query: 148 LIYLDDGFWIKDSKLTRIQYRRKLQYKNDLLSLMPFDLLYFVFGFECTFLRLPRLIKIQT 207
+L+ G +KD K R Y LQ+K D+ S++P DL+YF G +R RL+
Sbjct: 198 TGFLEQGLLVKDPKKLRDNYIHTLQFKLDVASIIPTDLIYFAVGIHSPEVRFNRLLHFAR 257
Query: 208 FWEFCNHFDSVLASPYVVRVARTLTYMIYLVHLNACAYYEISVREGLGINSWVYDG---- 263
+EF + ++ + P + R++ + Y++ ++H NAC YY IS G G+++WVY
Sbjct: 258 MFEFFDRTETRTSYPNIFRISNLVLYILVIIHWNACIYYVISKSIGFGVDTWVYPNITDP 317
Query: 264 ----KGNAYIRCFYFATKTATSIGKNPRPTNEMEYVFMTVSWLLGVFVFAVLIGQ 314
YI C Y++T T T+IG+ P P + EY+F+ +L+GV +FA ++G
Sbjct: 318 EYGYLAREYIYCLYWSTLTLTTIGETPPPVKDEEYLFVIFDFLIGVLIFATIVGN 372
>sp|P29974|CNGA1_MOUSE cGMP-gated cation channel alpha-1 OS=Mus musculus GN=Cnga1 PE=2
SV=2
Length = 684
Score = 151 bits (382), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 83/235 (35%), Positives = 132/235 (56%), Gaps = 9/235 (3%)
Query: 88 GYWYISWLCLVTLSYLYNCFVIPLRVTFPYQTRSNLITWFVFDYVMDVIYILDLLLIKPR 147
G Y +WL +TL +YN +I R F L W +FDYV DV+Y+ D+ ++ R
Sbjct: 154 GNTYYNWLFCITLPVMYNWTMIIARACFDELQSDYLEYWLIFDYVSDVVYLADMF-VRTR 212
Query: 148 LIYLDDGFWIKDSKLTRIQYRRKLQYKNDLLSLMPFDLLYFVFGFECTFLRLPRLIKIQT 207
YL+ G +KD +Y+ LQ+K D+LS++P DLLY FG+ +RL RL++I
Sbjct: 213 TGYLEQGLLVKDRMKLIEKYKANLQFKLDVLSVIPTDLLYIKFGWNYPEIRLNRLLRISR 272
Query: 208 FWEFCNHFDSVLASPYVVRVARTLTYMIYLVHLNACAYYEISVREGLGINSWVYDGKGN- 266
+EF ++ P + R++ + Y++ ++H NAC YY IS G G ++WVY +
Sbjct: 273 MFEFFQRTETRTNYPNIFRISNLVMYIVIIIHWNACVYYSISKAIGFGNDTWVYPDVNDP 332
Query: 267 -------AYIRCFYFATKTATSIGKNPRPTNEMEYVFMTVSWLLGVFVFAVLIGQ 314
Y+ Y++T T T+IG+ P P + EY+F+ V +L+GV +FA ++G
Sbjct: 333 EFGRLARKYVYSLYWSTLTLTTIGETPPPVLDSEYIFVVVDFLIGVLIFATIVGN 387
Score = 31.6 bits (70), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 13/56 (23%), Positives = 26/56 (46%)
Query: 32 CSQIRDIIATATKGQTEYRKLMDETLDYLRRLNVPPRIRERVKQWFSFTWEQQHTL 87
I +I+ + E++ +D Y+ NV + +RV +WF + W + T+
Sbjct: 385 VGNIGSMISNMNAARAEFQSRVDAIKQYMNFRNVSKDMEKRVIKWFDYLWTNKKTV 440
>sp|Q16280|CNGA2_HUMAN Cyclic nucleotide-gated olfactory channel OS=Homo sapiens GN=CNGA2
PE=2 SV=2
Length = 664
Score = 151 bits (382), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 81/235 (34%), Positives = 128/235 (54%), Gaps = 9/235 (3%)
Query: 88 GYWYISWLCLVTLSYLYNCFVIPLRVTFPYQTRSNLITWFVFDYVMDVIYILDLLLIKPR 147
G WY WL ++ + LYN ++ R F + + W V DYV DV+YI DL I+ R
Sbjct: 137 GDWYYCWLFVIAMPVLYNWCLLVARACFSDLQKGYYLVWLVLDYVSDVVYIADLF-IRLR 195
Query: 148 LIYLDDGFWIKDSKLTRIQYRRKLQYKNDLLSLMPFDLLYFVFGFECTFLRLPRLIKIQT 207
+L+ G +KD+K R Y LQ+K D+ S++P DL+YF +R RL+
Sbjct: 196 TGFLEQGLLVKDTKKLRDNYIHTLQFKLDVASIIPTDLIYFAVDIHSPEVRFNRLLHFAR 255
Query: 208 FWEFCNHFDSVLASPYVVRVARTLTYMIYLVHLNACAYYEISVREGLGINSWVYDG---- 263
+EF + ++ P + R++ + Y++ ++H NAC YY IS G G+++WVY
Sbjct: 256 MFEFFDRTETRTNYPNIFRISNLVLYILVIIHWNACIYYAISKSIGFGVDTWVYPNITDP 315
Query: 264 ----KGNAYIRCFYFATKTATSIGKNPRPTNEMEYVFMTVSWLLGVFVFAVLIGQ 314
YI C Y++T T T+IG+ P P + EY+F+ +L+GV +FA ++G
Sbjct: 316 EYGYLAREYIYCLYWSTLTLTTIGETPPPVKDEEYLFVIFDFLIGVLIFATIVGN 370
>sp|Q03041|CNGA2_BOVIN Cyclic nucleotide-gated olfactory channel OS=Bos taurus GN=CNGA2
PE=1 SV=1
Length = 663
Score = 151 bits (382), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 84/235 (35%), Positives = 131/235 (55%), Gaps = 9/235 (3%)
Query: 88 GYWYISWLCLVTLSYLYNCFVIPLRVTFPYQTRSNLITWFVFDYVMDVIYILDLLLIKPR 147
G WY WL L+ L LYN ++ R F + I W V DYV DV+YI DL I+ R
Sbjct: 137 GDWYYRWLFLIALPVLYNWCLLVARACFSDLQKGYYIVWLVLDYVSDVVYIADLF-IRLR 195
Query: 148 LIYLDDGFWIKDSKLTRIQYRRKLQYKNDLLSLMPFDLLYFVFGFECTFLRLPRLIKIQT 207
+L+ G +KD+K R Y +Q+K D+ S++P DL+YF G +R RL+
Sbjct: 196 TGFLEQGLLVKDTKKLRDNYIHTMQFKLDVASIIPTDLIYFAVGIHNPEVRFNRLLHFAR 255
Query: 208 FWEFCNHFDSVLASPYVVRVARTLTYMIYLVHLNACAYYEISVREGLGINSWVYDGKGN- 266
+EF + ++ + P + R++ + Y++ ++H NAC YY IS G G+++WVY +
Sbjct: 256 MFEFFDRTETRTSYPNIFRISNLILYILIIIHWNACIYYAISKSIGFGVDTWVYPNITDP 315
Query: 267 -------AYIRCFYFATKTATSIGKNPRPTNEMEYVFMTVSWLLGVFVFAVLIGQ 314
YI C Y++T T T+IG+ P P + EY+F+ +L+GV +FA ++G
Sbjct: 316 EYGYLSREYIYCLYWSTLTLTTIGETPPPVKDEEYLFVIFDFLIGVLIFATIVGN 370
>sp|Q28279|CNGA1_CANFA cGMP-gated cation channel alpha-1 OS=Canis familiaris GN=CNGA1 PE=2
SV=1
Length = 691
Score = 150 bits (378), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 79/235 (33%), Positives = 132/235 (56%), Gaps = 9/235 (3%)
Query: 88 GYWYISWLCLVTLSYLYNCFVIPLRVTFPYQTRSNLITWFVFDYVMDVIYILDLLLIKPR 147
G Y +WL +TL +YN ++ R F L W +FDY+ D++Y+LD+ ++ R
Sbjct: 161 GNMYYNWLFCITLPVMYNWTMVIARACFDELQSDYLEYWIIFDYLSDIVYLLDMF-VRTR 219
Query: 148 LIYLDDGFWIKDSKLTRIQYRRKLQYKNDLLSLMPFDLLYFVFGFECTFLRLPRLIKIQT 207
YL+ G +++ +Y+ LQ+K D LS++P DLLYF G+ +RL RL++I
Sbjct: 220 TGYLEQGLLVREEAKLIEKYKSNLQFKLDFLSVIPTDLLYFKLGWNYPEIRLNRLLRISR 279
Query: 208 FWEFCNHFDSVLASPYVVRVARTLTYMIYLVHLNACAYYEISVREGLGINSWVYDGKGN- 266
+EF ++ P + R++ + Y++ ++H NAC Y+ IS G G ++WVY +
Sbjct: 280 MFEFFQRTETRTNYPNIFRISNLVMYIVIIIHWNACVYFSISKAIGFGNDTWVYPDVNDP 339
Query: 267 -------AYIRCFYFATKTATSIGKNPRPTNEMEYVFMTVSWLLGVFVFAVLIGQ 314
Y+ Y++T T T+IG+ P P + EYVF+ V +L+GV +FA ++G
Sbjct: 340 EFGRLARKYVYSLYWSTLTLTTIGETPPPVRDSEYVFVVVDFLIGVLIFATIVGN 394
>sp|Q00194|CNGA1_BOVIN cGMP-gated cation channel alpha-1 OS=Bos taurus GN=CNGA1 PE=1 SV=1
Length = 690
Score = 147 bits (371), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 80/235 (34%), Positives = 130/235 (55%), Gaps = 9/235 (3%)
Query: 88 GYWYISWLCLVTLSYLYNCFVIPLRVTFPYQTRSNLITWFVFDYVMDVIYILDLLLIKPR 147
G Y +WL +TL +YN +I R F L W FDY+ DV+Y+LD+ ++ R
Sbjct: 160 GNTYYNWLFCITLPVMYNWTMIIARACFDELQSDYLEYWLAFDYLSDVVYLLDMF-VRTR 218
Query: 148 LIYLDDGFWIKDSKLTRIQYRRKLQYKNDLLSLMPFDLLYFVFGFECTFLRLPRLIKIQT 207
YL+ G +K+ + +Y+ Q+K D+LS++P DLLY FG+ +RL RL++I
Sbjct: 219 TGYLEQGLLVKEERKLIDKYKSTFQFKLDVLSVIPTDLLYIKFGWNYPEIRLNRLLRISR 278
Query: 208 FWEFCNHFDSVLASPYVVRVARTLTYMIYLVHLNACAYYEISVREGLGINSWVYDGKGN- 266
+EF ++ P + R++ + Y+I ++H NAC Y+ IS G G ++WVY +
Sbjct: 279 MFEFFQRTETRTNYPNIFRISNLVMYIIIIIHWNACVYFSISKAIGFGNDTWVYPDVNDP 338
Query: 267 -------AYIRCFYFATKTATSIGKNPRPTNEMEYVFMTVSWLLGVFVFAVLIGQ 314
Y+ Y++T T T+IG+ P P + EY F+ +L+GV +FA ++G
Sbjct: 339 DFGRLARKYVYSLYWSTLTLTTIGETPPPVRDSEYFFVVADFLIGVLIFATIVGN 393
Score = 31.2 bits (69), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 13/56 (23%), Positives = 26/56 (46%)
Query: 32 CSQIRDIIATATKGQTEYRKLMDETLDYLRRLNVPPRIRERVKQWFSFTWEQQHTL 87
I +I+ + E++ +D Y+ NV + +RV +WF + W + T+
Sbjct: 391 VGNIGSMISNMNAARAEFQARIDAIKQYMHFRNVSKDMEKRVIKWFDYLWTNKKTV 446
>sp|P29973|CNGA1_HUMAN cGMP-gated cation channel alpha-1 OS=Homo sapiens GN=CNGA1 PE=1
SV=3
Length = 690
Score = 147 bits (370), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 80/235 (34%), Positives = 132/235 (56%), Gaps = 9/235 (3%)
Query: 88 GYWYISWLCLVTLSYLYNCFVIPLRVTFPYQTRSNLITWFVFDYVMDVIYILDLLLIKPR 147
G Y +WL +TL +YN ++ R F L W + DYV D++Y++D+ ++ R
Sbjct: 162 GNTYYNWLFCITLPVMYNWTMVIARACFDELQSDYLEYWLILDYVSDIVYLIDMF-VRTR 220
Query: 148 LIYLDDGFWIKDSKLTRIQYRRKLQYKNDLLSLMPFDLLYFVFGFECTFLRLPRLIKIQT 207
YL+ G +K+ +Y+ LQ+K D+LSL+P DLLYF G+ +RL RL++
Sbjct: 221 TGYLEQGLLVKEELKLINKYKSNLQFKLDVLSLIPTDLLYFKLGWNYPEIRLNRLLRFSR 280
Query: 208 FWEFCNHFDSVLASPYVVRVARTLTYMIYLVHLNACAYYEISVREGLGINSWVYD----- 262
+EF ++ P + R++ + Y++ ++H NAC +Y IS G G ++WVY
Sbjct: 281 MFEFFQRTETRTNYPNIFRISNLVMYIVIIIHWNACVFYSISKAIGFGNDTWVYPDINDP 340
Query: 263 --GK-GNAYIRCFYFATKTATSIGKNPRPTNEMEYVFMTVSWLLGVFVFAVLIGQ 314
G+ Y+ Y++T T T+IG+ P P + EYVF+ V +L+GV +FA ++G
Sbjct: 341 EFGRLARKYVYSLYWSTLTLTTIGETPPPVRDSEYVFVVVDFLIGVLIFATIVGN 395
>sp|Q9JJZ8|CNGA3_MOUSE Cyclic nucleotide-gated cation channel alpha-3 OS=Mus musculus
GN=Cnga3 PE=1 SV=2
Length = 631
Score = 142 bits (359), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 78/232 (33%), Positives = 122/232 (52%), Gaps = 9/232 (3%)
Query: 91 YISWLCLVTLSYLYNCFVIPLRVTFPYQTRSNLITWFVFDYVMDVIYILDLLLIKPRLIY 150
Y WL + L YN ++ R F +L W V DY DV+Y+LD+L ++ R +
Sbjct: 109 YYRWLTAIALPVFYNWCLLVCRACFDELQSEHLTLWLVLDYSADVLYVLDML-VRARTGF 167
Query: 151 LDDGFWIKDSKLTRIQYRRKLQYKNDLLSLMPFDLLYFVFGFECTFLRLPRLIKIQTFWE 210
L+ G ++D+K Y + L +K D+LSL+P DL Y G LR RL+K +E
Sbjct: 168 LEQGLMVRDTKRLWKHYTKTLHFKLDILSLIPTDLAYLKLGVNYPELRFNRLLKFSRLFE 227
Query: 211 FCNHFDSVLASPYVVRVARTLTYMIYLVHLNACAYYEISVREGLGINSWVYDGKGN---- 266
F + ++ P V R+ + Y + ++H NAC Y+ IS G G +SWVY
Sbjct: 228 FFDRTETRTNYPNVFRIGNLVLYTLIIIHWNACIYFAISKFIGFGTDSWVYPNTSKPEYA 287
Query: 267 ----AYIRCFYFATKTATSIGKNPRPTNEMEYVFMTVSWLLGVFVFAVLIGQ 314
YI Y++T T T+IG+ P P + EY+F+ + +L+G+ +FA ++G
Sbjct: 288 RLSRKYIYSLYWSTLTLTTIGETPPPVKDEEYLFVVIDFLVGILIFATIVGN 339
>sp|Q29441|CNGA3_BOVIN Cyclic nucleotide-gated cation channel alpha-3 OS=Bos taurus
GN=CNGA3 PE=2 SV=1
Length = 706
Score = 140 bits (352), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 76/232 (32%), Positives = 125/232 (53%), Gaps = 9/232 (3%)
Query: 91 YISWLCLVTLSYLYNCFVIPLRVTFPYQTRSNLITWFVFDYVMDVIYILDLLLIKPRLIY 150
Y WL ++ + YN ++ R F +L+ W V DY D++Y +D+L ++ R +
Sbjct: 187 YYHWLTVIAVPVFYNWCLLVCRACFDELQSEHLMLWLVLDYSADILYGMDML-VRARTGF 245
Query: 151 LDDGFWIKDSKLTRIQYRRKLQYKNDLLSLMPFDLLYFVFGFECTFLRLPRLIKIQTFWE 210
L+ G + D+ Y + L +K D+LSL+P DL YF G LR RL+K+ +E
Sbjct: 246 LEQGLMVMDASRLWKHYTQTLHFKLDVLSLVPTDLAYFKLGMNYPELRFNRLLKLARLFE 305
Query: 211 FCNHFDSVLASPYVVRVARTLTYMIYLVHLNACAYYEISVREGLGINSWVYDGKGN---- 266
F + ++ P + R+ + Y++ ++H NAC Y+ IS G G +SWVY N
Sbjct: 306 FFDRTETRTNYPNMFRIGNLVLYILIIIHWNACIYFAISKFIGFGTDSWVYPNVSNPEYG 365
Query: 267 ----AYIRCFYFATKTATSIGKNPRPTNEMEYVFMTVSWLLGVFVFAVLIGQ 314
YI Y++T T T+IG+ P P + EY+F+ + +L+GV +FA ++G
Sbjct: 366 RLSRKYIYSLYWSTLTLTTIGETPPPVKDEEYLFVVIDFLVGVLIFATIVGN 417
>sp|Q90805|CNG1_CHICK Cyclic nucleotide-gated channel cone photoreceptor subunit alpha
OS=Gallus gallus PE=2 SV=1
Length = 735
Score = 139 bits (349), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 76/232 (32%), Positives = 125/232 (53%), Gaps = 9/232 (3%)
Query: 91 YISWLCLVTLSYLYNCFVIPLRVTFPYQTRSNLITWFVFDYVMDVIYILDLLLIKPRLIY 150
Y +WL ++ YN ++ R F ++ W DY D+IY+ D+ ++ R +
Sbjct: 210 YYNWLTIIAAPVFYNWCMLICRACFDELQIDHIKLWLFLDYCSDIIYVFDMF-VRFRTGF 268
Query: 151 LDDGFWIKDSKLTRIQYRRKLQYKNDLLSLMPFDLLYFVFGFECTFLRLPRLIKIQTFWE 210
L+ G +KD K R Y + +Q+K D+LSL+P DL Y G LR RL++I +E
Sbjct: 269 LEQGLLVKDEKKLRDHYTQTVQFKLDVLSLLPTDLAYLKLGLNYPELRFNRLLRIARLFE 328
Query: 211 FCNHFDSVLASPYVVRVARTLTYMIYLVHLNACAYYEISVREGLGINSWVYD-------G 263
F + ++ P + R+ + Y++ ++H NAC Y+ IS G G +SWVY G
Sbjct: 329 FFDRTETRTNYPNMFRIGNLVLYILIIIHWNACIYFAISKVIGFGTDSWVYPNVSIPEYG 388
Query: 264 K-GNAYIRCFYFATKTATSIGKNPRPTNEMEYVFMTVSWLLGVFVFAVLIGQ 314
+ YI Y++T T T+IG+ P P + EY+F+ + +L+GV +FA ++G
Sbjct: 389 RLSRKYIYSLYWSTLTLTTIGETPPPVKDEEYLFVVIDFLVGVLIFATIVGN 440
>sp|Q16281|CNGA3_HUMAN Cyclic nucleotide-gated cation channel alpha-3 OS=Homo sapiens
GN=CNGA3 PE=1 SV=2
Length = 694
Score = 137 bits (345), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 78/232 (33%), Positives = 124/232 (53%), Gaps = 9/232 (3%)
Query: 91 YISWLCLVTLSYLYNCFVIPLRVTFPYQTRSNLITWFVFDYVMDVIYILDLLLIKPRLIY 150
Y WL + L YN +++ R F L+ W V DY DV+Y+LD+L ++ R +
Sbjct: 168 YYRWLTAIALPVFYNWYLLICRACFDELQSEYLMLWLVLDYSADVLYVLDVL-VRARTGF 226
Query: 151 LDDGFWIKDSKLTRIQYRRKLQYKNDLLSLMPFDLLYFVFGFECTFLRLPRLIKIQTFWE 210
L+ G + D+ Y+ Q+K D+LSL+P DL Y G +R RL+K +E
Sbjct: 227 LEQGLMVSDTNRLWQHYKTTTQFKLDVLSLVPTDLAYLKVGTNYPEVRFNRLLKFSRLFE 286
Query: 211 FCNHFDSVLASPYVVRVARTLTYMIYLVHLNACAYYEISVREGLGINSWVY-------DG 263
F + ++ P + R+ + Y++ ++H NAC Y+ IS G G +SWVY G
Sbjct: 287 FFDRTETRTNYPNMFRIGNLVLYILIIIHWNACIYFAISKFIGFGTDSWVYPNISIPEHG 346
Query: 264 K-GNAYIRCFYFATKTATSIGKNPRPTNEMEYVFMTVSWLLGVFVFAVLIGQ 314
+ YI Y++T T T+IG+ P P + EY+F+ V +L+GV +FA ++G
Sbjct: 347 RLSRKYIYSLYWSTLTLTTIGETPPPVKDEEYLFVVVDFLVGVLIFATIVGN 398
>sp|Q24278|CNG_DROME Cyclic nucleotide-gated cation channel OS=Drosophila melanogaster
GN=Cng PE=2 SV=2
Length = 665
Score = 130 bits (328), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 79/237 (33%), Positives = 125/237 (52%), Gaps = 17/237 (7%)
Query: 94 WLCLVTLSYLYNCFVIPLRVTFPYQTRSNLITWFVFDYVMDVIYILDLLLIKPRLIYLDD 153
WL +V+L+ LYN + R F +S W+ DY+ D IY+LD L + +LD
Sbjct: 110 WLAIVSLAVLYNIIFVVGRAVFWEINKSAPAFWYTLDYLCDFIYLLDTL-VHMHEGFLDQ 168
Query: 154 GFWIKDSKLTRIQYRRKLQYKNDLLSLMPFDLLYFVFGFE-CTFLRLP--------RLIK 204
G ++D+ R Y + D+LS++P DL Y + E C+ L LP RL++
Sbjct: 169 GLLVRDAFRLRRHYFHTKGWYLDVLSMLPTDLAYIWWPPETCSSLYLPCPVIVRLNRLLR 228
Query: 205 IQTFWEFCNHFDSVLASPYVVRVARTLTYMIYLVHLNACAYYEISVREGLGINSWVYDGK 264
I WE+ + ++ P R+ + + ++ L+H NAC Y+ IS G +SWVY+
Sbjct: 229 INRLWEWFDRTETATGYPNAFRICKVVLAILVLIHWNACMYFAISYEIGFSSDSWVYNLN 288
Query: 265 GN-------AYIRCFYFATKTATSIGKNPRPTNEMEYVFMTVSWLLGVFVFAVLIGQ 314
G YI FY++T T T+IG+ P P N++EY+F+ +L GV +FA ++G
Sbjct: 289 GTRNNTLQRQYIYSFYWSTLTLTTIGETPTPENDVEYLFVVADFLAGVLIFATIVGN 345
Score = 32.0 bits (71), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 25/55 (45%)
Query: 33 SQIRDIIATATKGQTEYRKLMDETLDYLRRLNVPPRIRERVKQWFSFTWEQQHTL 87
I +I+ + E++ MD Y+ V + RV +WF++TW Q L
Sbjct: 344 GNIGSMISNMNVARVEFQNRMDGVKQYMAFRRVGHELEARVIRWFAYTWSQSGAL 398
>sp|Q3UW12|CNGA4_MOUSE Cyclic nucleotide-gated cation channel alpha-4 OS=Mus musculus
GN=Cnga4 PE=2 SV=1
Length = 575
Score = 129 bits (325), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 73/234 (31%), Positives = 118/234 (50%), Gaps = 9/234 (3%)
Query: 88 GYWYISWLCLVTLSYLYNCFVIPLRVTFPYQTRSNLITWFVFDYVMDVIYILDLLLIKPR 147
G +Y WL + +YN ++ R FP S L+ WFV DY D++Y+LD+ ++
Sbjct: 31 GDYYYWWLNTMVFPIMYNLIIVVCRACFPDLQHSYLVAWFVLDYTSDLLYLLDIG-VRFH 89
Query: 148 LIYLDDGFWIKDSKLTRIQYRRKLQYKNDLLSLMPFDLLYFVFGFECTFLRLPRLIKIQT 207
+L+ G + D + +Y R + DL SL+P D Y G LRL R +++
Sbjct: 90 TGFLEQGILVVDKSMIASRYVRTWSFLLDLASLVPTDAAYVQLGPHIPTLRLNRFLRVPR 149
Query: 208 FWEFCNHFDSVLASPYVVRVARTLTYMIYLVHLNACAYYEISVREGLGINSWVYDGKGNA 267
+E + ++ A P R+A+ + Y+ ++H N+C Y+ +S G G ++WVY
Sbjct: 150 LFEAFDRTETRTAYPNAFRIAKLMIYIFVVIHWNSCLYFALSRYLGFGRDAWVYPDPAQP 209
Query: 268 --------YIRCFYFATKTATSIGKNPRPTNEMEYVFMTVSWLLGVFVFAVLIG 313
Y+ FYF+T T++G P P E EY+FM +LL V FA ++G
Sbjct: 210 GFERLRRQYLYSFYFSTLILTTVGDTPLPAREEEYLFMVGDFLLAVMGFATIMG 263
>sp|Q64359|CNGA4_RAT Cyclic nucleotide-gated cation channel alpha-4 OS=Rattus norvegicus
GN=Cnga4 PE=2 SV=1
Length = 575
Score = 128 bits (322), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 73/234 (31%), Positives = 118/234 (50%), Gaps = 9/234 (3%)
Query: 88 GYWYISWLCLVTLSYLYNCFVIPLRVTFPYQTRSNLITWFVFDYVMDVIYILDLLLIKPR 147
G +Y WL + +YN ++ R FP S L+ WFV DY D++Y+LD+ ++
Sbjct: 31 GDYYYWWLNTMVFPIMYNLIIVVCRACFPDLQHSYLVAWFVLDYTSDLLYLLDIG-VRFH 89
Query: 148 LIYLDDGFWIKDSKLTRIQYRRKLQYKNDLLSLMPFDLLYFVFGFECTFLRLPRLIKIQT 207
+L+ G + D + +Y R + DL SL+P D Y G LRL R +++
Sbjct: 90 TGFLEQGILVVDKGMIASRYVRTWSFLLDLASLVPTDAAYVQLGPHIPTLRLNRFLRVPR 149
Query: 208 FWEFCNHFDSVLASPYVVRVARTLTYMIYLVHLNACAYYEISVREGLGINSWVYDGKGNA 267
+E + ++ A P R+A+ + Y+ ++H N+C Y+ +S G G ++WVY
Sbjct: 150 LFEAFDRTETRTAYPNAFRIAKLMLYIFVVIHWNSCLYFALSRYLGFGRDAWVYPDPAQP 209
Query: 268 --------YIRCFYFATKTATSIGKNPRPTNEMEYVFMTVSWLLGVFVFAVLIG 313
Y+ FYF+T T++G P P E EY+FM +LL V FA ++G
Sbjct: 210 GFERLRRQYLYSFYFSTLILTTVGDTPLPDREEEYLFMVGDFLLAVMGFATIMG 263
>sp|Q8IV77|CNGA4_HUMAN Cyclic nucleotide-gated cation channel alpha-4 OS=Homo sapiens
GN=CNGA4 PE=1 SV=3
Length = 575
Score = 127 bits (318), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 72/234 (30%), Positives = 117/234 (50%), Gaps = 9/234 (3%)
Query: 88 GYWYISWLCLVTLSYLYNCFVIPLRVTFPYQTRSNLITWFVFDYVMDVIYILDLLLIKPR 147
G +Y WL + +YN ++ R FP L+ W V DY D++Y+LD++ ++
Sbjct: 31 GDYYYWWLNTMVFPVMYNLIILVCRACFPDLQHGYLVAWLVLDYTSDLLYLLDMV-VRFH 89
Query: 148 LIYLDDGFWIKDSKLTRIQYRRKLQYKNDLLSLMPFDLLYFVFGFECTFLRLPRLIKIQT 207
+L+ G + D +Y R + DL SLMP D++Y G LRL R ++
Sbjct: 90 TGFLEQGILVVDKGRISSRYVRTWSFFLDLASLMPTDVVYVRLGPHTPTLRLNRFLRAPR 149
Query: 208 FWEFCNHFDSVLASPYVVRVARTLTYMIYLVHLNACAYYEISVREGLGINSWVYDGKGNA 267
+E + ++ A P R+A+ + Y+ ++H N+C Y+ +S G G ++WVY
Sbjct: 150 LFEAFDRTETRTAYPNAFRIAKLMLYIFVVIHWNSCLYFALSRYLGFGRDAWVYPDPAQP 209
Query: 268 --------YIRCFYFATKTATSIGKNPRPTNEMEYVFMTVSWLLGVFVFAVLIG 313
Y+ FYF+T T++G P P E EY+FM +LL V FA ++G
Sbjct: 210 GFERLRRQYLYSFYFSTLILTTVGDTPPPAREEEYLFMVGDFLLAVMGFATIMG 263
>sp|Q03611|CNG_CAEEL Cyclic nucleotide-gated cation channel OS=Caenorhabditis elegans
GN=tax-4 PE=2 SV=3
Length = 733
Score = 93.2 bits (230), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 88/349 (25%), Positives = 151/349 (43%), Gaps = 85/349 (24%)
Query: 38 IIATATKGQTEYRKLMDETLDYLRRLNVPPRIRE---RVKQWFSFTWEQQHTLGYWYISW 94
+ AT GQ + D + VPP R++++ + + T ++Y W
Sbjct: 74 VQPAATGGQPA-------SSDGGSAIEVPPPKESYAVRIRKYLANYTQDPSTDNFYY--W 124
Query: 95 LCLVTLSYLYNC-FVIPLRV----------------------TFPYQTRSNLIT------ 125
C+VT++Y+YN FVI +V T + N++T
Sbjct: 125 TCVVTVAYIYNLLFVIARQVFNDLIGPSSQSLCRFYNGTLNSTTQVECTYNMLTNMKEMP 184
Query: 126 -------------------WFVFDYVMDVIYILDLLLIKPRLIYLDDGFWIKDSKLTRIQ 166
W FD +MD +Y++D L R+ Y+D G +++++
Sbjct: 185 TYSQYPDLGWSKYWHFRMLWVFFDLLMDCVYLIDTFL-NYRMGYMDQGLVVREAEKVTKA 243
Query: 167 YRRKLQYKNDLLSLMPFDLLYFVFGFECTF--------LRLPRLIKIQTFWEFCNHFDSV 218
Y + QY+ D +SL+P D ++ G+ + LRL RLI+ + ++
Sbjct: 244 YWQSKQYRIDGISLIPLD---YILGWPIPYINWRGLPILRLNRLIRYKRVRNCLERTETR 300
Query: 219 LASPYVVRVARTLTYMIYLVHLNACAYYEISVREGLGINSWVY-------------DGKG 265
+ P RV + Y++ ++H NAC Y+ IS GLG ++WVY D
Sbjct: 301 SSMPNAFRVVVVVWYIVIIIHWNACLYFWISEWIGLGTDAWVYGHLNKQSLPDDITDTLL 360
Query: 266 NAYIRCFYFATKTATSIGKNPRPTNEMEYVFMTVSWLLGVFVFAVLIGQ 314
Y+ FY++T T+IG+ P P +EY F+T+ + GV +FA ++G
Sbjct: 361 RRYVYSFYWSTLILTTIGEVPSPVRNIEYAFVTLDLMCGVLIFATIVGN 409
Score = 31.6 bits (70), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 13/55 (23%), Positives = 27/55 (49%)
Query: 33 SQIRDIIATATKGQTEYRKLMDETLDYLRRLNVPPRIRERVKQWFSFTWEQQHTL 87
+ +I+ + +TE++ MD Y+ V ++ RV +WF + W + +L
Sbjct: 408 GNVGSMISNMSAARTEFQNKMDGIKQYMELRKVSKQLEIRVIKWFDYLWTNKQSL 462
>sp|Q9EPI9|KCNH5_RAT Potassium voltage-gated channel subfamily H member 5 OS=Rattus
norvegicus GN=Kcnh5 PE=2 SV=1
Length = 988
Score = 67.0 bits (162), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 112/257 (43%), Gaps = 43/257 (16%)
Query: 93 SWLCLVTLSYLYNCFVIPLRVTFPYQTRSNLITWFVFDYVMDVIYILDLLLIKPRLIYLD 152
+W ++ + Y ++P V+F +T+ N I W V D V+DVI+++D++L
Sbjct: 216 TWDWVILILTFYTAIMVPYNVSF--KTKQNNIAWLVLDSVVDVIFLVDIVLNFHTTFVGP 273
Query: 153 DGFWIKDSKLTRIQYRRKLQYKNDLLSLMPFDLL----YFVFGFECTF--LRLPRLIKIQ 206
G I D KL R+ Y K + DLLS +P+D++ G F L++ RL+++
Sbjct: 274 GGEVISDPKLIRMNY-LKTWFVIDLLSCLPYDIINAFENVDEGISSLFSSLKVVRLLRLG 332
Query: 207 TFWEFCNHFDSVLASPYVVRVARTLTYMIYLVHLNACAYYEIS-------VREGLGINSW 259
+H+ A+ V+ V + H AC +Y I V + I+SW
Sbjct: 333 RVARKLDHYLEYGAAVLVLLVC----VFGLVAHWLACIWYSIGDYEVIDEVTNTIQIDSW 388
Query: 260 VYD----------------------GKGNAYIRCFYFATKTATSIG-KNPRPTNEMEYVF 296
+Y K + Y+ YF + T+IG N PT ++E +F
Sbjct: 389 LYQLALSIGTPYRYNTSAGIWEGGPSKDSLYVSSLYFTMTSLTTIGFGNIAPTTDVEKMF 448
Query: 297 MTVSWLLGVFVFAVLIG 313
++G ++A + G
Sbjct: 449 SVAMMMVGSLLYATIFG 465
>sp|Q8NCM2|KCNH5_HUMAN Potassium voltage-gated channel subfamily H member 5 OS=Homo
sapiens GN=KCNH5 PE=1 SV=3
Length = 988
Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 112/257 (43%), Gaps = 43/257 (16%)
Query: 93 SWLCLVTLSYLYNCFVIPLRVTFPYQTRSNLITWFVFDYVMDVIYILDLLLIKPRLIYLD 152
+W ++ + Y ++P V+F +T+ N I W V D V+DVI+++D++L
Sbjct: 216 TWDWVILILTFYTAIMVPYNVSF--KTKQNNIAWLVLDSVVDVIFLVDIVLNFHTTFVGP 273
Query: 153 DGFWIKDSKLTRIQYRRKLQYKNDLLSLMPFDLL----YFVFGFECTF--LRLPRLIKIQ 206
G I D KL R+ Y K + DLLS +P+D++ G F L++ RL+++
Sbjct: 274 GGEVISDPKLIRMNY-LKTWFVIDLLSCLPYDIINAFENVDEGISSLFSSLKVVRLLRLG 332
Query: 207 TFWEFCNHFDSVLASPYVVRVARTLTYMIYLVHLNACAYYEIS-------VREGLGINSW 259
+H+ A+ V+ V + H AC +Y I V + I+SW
Sbjct: 333 RVARKLDHYLEYGAAVLVLLVC----VFGLVAHWLACIWYSIGDYEVIDEVTNTIQIDSW 388
Query: 260 VYD----------------------GKGNAYIRCFYFATKTATSIG-KNPRPTNEMEYVF 296
+Y K + Y+ YF + T+IG N PT ++E +F
Sbjct: 389 LYQLALSIGTPYRYNTSAGIWEGGPSKDSLYVSSLYFTMTSLTTIGFGNIAPTTDVEKMF 448
Query: 297 MTVSWLLGVFVFAVLIG 313
++G ++A + G
Sbjct: 449 SVAMMMVGSLLYATIFG 465
>sp|Q920E3|KCNH5_MOUSE Potassium voltage-gated channel subfamily H member 5 OS=Mus
musculus GN=Kcnh5 PE=2 SV=3
Length = 988
Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 112/257 (43%), Gaps = 43/257 (16%)
Query: 93 SWLCLVTLSYLYNCFVIPLRVTFPYQTRSNLITWFVFDYVMDVIYILDLLLIKPRLIYLD 152
+W ++ + Y ++P V+F +T+ N I W V D V+DVI+++D++L
Sbjct: 216 TWDWVILILTFYTAIMVPYNVSF--KTKQNNIAWLVLDSVVDVIFLVDIVLNFHTTFVGP 273
Query: 153 DGFWIKDSKLTRIQYRRKLQYKNDLLSLMPFDLL----YFVFGFECTF--LRLPRLIKIQ 206
G I D KL R+ Y K + DLLS +P+D++ G F L++ RL+++
Sbjct: 274 GGEVISDPKLIRMNY-LKTWFVIDLLSCLPYDIINAFENVDEGISSLFSSLKVVRLLRLG 332
Query: 207 TFWEFCNHFDSVLASPYVVRVARTLTYMIYLVHLNACAYYEIS-------VREGLGINSW 259
+H+ A+ V+ V + H AC +Y I V + I+SW
Sbjct: 333 RVARKLDHYLEYGAAVLVLLVC----VFGLVAHWLACIWYSIGDYEVIDEVTNTIQIDSW 388
Query: 260 VYD----------------------GKGNAYIRCFYFATKTATSIG-KNPRPTNEMEYVF 296
+Y K + Y+ YF + T+IG N PT ++E +F
Sbjct: 389 LYQLALSIGTPYRYNTSAGIWEGGPSKDSLYVSSLYFTMTSLTTIGFGNIAPTTDVEKMF 448
Query: 297 MTVSWLLGVFVFAVLIG 313
++G ++A + G
Sbjct: 449 SVAMMMVGSLLYATIFG 465
>sp|Q63472|KCNH1_RAT Potassium voltage-gated channel subfamily H member 1 OS=Rattus
norvegicus GN=Kcnh1 PE=1 SV=1
Length = 962
Score = 65.9 bits (159), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 112/259 (43%), Gaps = 44/259 (16%)
Query: 93 SWLCLVTLSYLYNCFVIPLRVTFPYQTRSNLITWFVFDYVMDVIYILDLLLIKPRLIYLD 152
+W ++ + Y ++P V+F +TR N + W V D ++DVI+++D++L
Sbjct: 219 TWDWIILILTFYTAILVPYNVSF--KTRQNNVAWLVVDSIVDVIFLVDIVLNFHTTFVGP 276
Query: 153 DGFWIKDSKLTRIQYRRKLQYKNDLLSLMPFDLL----YFVFGFECTF--LRLPRLIKIQ 206
G I D KL R+ Y K + DLLS +P+D++ G F L++ RL+++
Sbjct: 277 AGEVISDPKLIRMNY-LKTWFVIDLLSCLPYDVINAFENVDEGISSLFSSLKVVRLLRLG 335
Query: 207 TFWEFCNHFDSVLASPYVVRVARTLTYMIYLVHLNACAYYEISVRE-------GLGINSW 259
+H+ A+ V+ V H AC +Y I E + NSW
Sbjct: 336 RVARKLDHYIEYGAAVLVLLVC----VFGLAAHWMACIWYSIGDYEIFDEDTKTIRNNSW 391
Query: 260 VY------------DGKGNA-----------YIRCFYFATKTATSIG-KNPRPTNEMEYV 295
+Y +G G+ YI YF + TS+G N P+ ++E +
Sbjct: 392 LYQLALDIGTPYQFNGSGSGKWEGGPSKNSVYISSLYFTMTSLTSVGFGNIAPSTDIEKI 451
Query: 296 FMTVSWLLGVFVFAVLIGQ 314
F ++G ++A + G
Sbjct: 452 FAVAIMMIGSLLYATIFGN 470
>sp|O18965|KCNH1_BOVIN Potassium voltage-gated channel subfamily H member 1 OS=Bos taurus
GN=KCNH1 PE=2 SV=2
Length = 987
Score = 61.6 bits (148), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 115/281 (40%), Gaps = 63/281 (22%)
Query: 93 SWLCLVTLSYLYNCFVIPLRVTFPYQTRSNLITWFVFDYVMDVIYILDLLLIKPRLIYLD 152
+W ++ + Y ++P V+F +TR N + W V D ++DVI+++D++L
Sbjct: 219 TWDWIILILTFYTAILVPYNVSF--KTRQNNVAWLVVDSIVDVIFLVDIVLNFHTTFVGP 276
Query: 153 DGFWIKDSKLTRIQYRRKLQYKNDLLSLMPFDLLYFVFGFE--CTFLRLPRLI----KIQ 206
G I D KL R+ Y K + DLLS +P+D++ + F+ P I +I
Sbjct: 277 AGEVISDPKLIRMNY-LKTWFVIDLLSCLPYDVINAFENVDEVSAFMGDPGKIGFADQIP 335
Query: 207 TFWEF--CNHFDSVLASPYVV------RVARTLTYMIY---------------LVHLNAC 243
E S+ +S VV RVAR L + I H AC
Sbjct: 336 PPLEGRESQGISSLFSSLKVVRLLRLGRVARKLDHYIEYGAAVLVLLVCVFGLAAHWMAC 395
Query: 244 AYYEISVRE-------GLGINSWVY------------DGKGNA-----------YIRCFY 273
+Y I E + NSW+Y +G G+ YI Y
Sbjct: 396 IWYSIGDYEIFDEDTKTIRNNSWLYQLAMDIGTPYQFNGSGSGKWEGGPSKNSVYISSLY 455
Query: 274 FATKTATSIG-KNPRPTNEMEYVFMTVSWLLGVFVFAVLIG 313
F + TS+G N P+ ++E +F ++G ++A + G
Sbjct: 456 FTMTSLTSVGFGNIAPSTDIEKIFAVAIMMIGSLLYATIFG 496
>sp|O95259|KCNH1_HUMAN Potassium voltage-gated channel subfamily H member 1 OS=Homo
sapiens GN=KCNH1 PE=1 SV=1
Length = 989
Score = 61.6 bits (148), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 115/282 (40%), Gaps = 63/282 (22%)
Query: 93 SWLCLVTLSYLYNCFVIPLRVTFPYQTRSNLITWFVFDYVMDVIYILDLLLIKPRLIYLD 152
+W ++ + Y ++P V+F +TR N + W V D ++DVI+++D++L
Sbjct: 219 TWDWIILILTFYTAILVPYNVSF--KTRQNNVAWLVVDSIVDVIFLVDIVLNFHTTFVGP 276
Query: 153 DGFWIKDSKLTRIQYRRKLQYKNDLLSLMPFDLLYFVFGFE--CTFLRLPRLI----KIQ 206
G I D KL R+ Y K + DLLS +P+D++ + F+ P I +I
Sbjct: 277 AGEVISDPKLIRMNY-LKTWFVIDLLSCLPYDVINAFENVDEVSAFMGDPGKIGFADQIP 335
Query: 207 TFWEF--CNHFDSVLASPYVV------RVARTLTYMIY---------------LVHLNAC 243
E S+ +S VV RVAR L + I H AC
Sbjct: 336 PPLEGRESQGISSLFSSLKVVRLLRLGRVARKLDHYIEYGAAVLVLLVCVFGLAAHWMAC 395
Query: 244 AYYEISVRE-------GLGINSWVY------------DGKGNA-----------YIRCFY 273
+Y I E + NSW+Y +G G+ YI Y
Sbjct: 396 IWYSIGDYEIFDEDTKTIRNNSWLYQLAMDIGTPYQFNGSGSGKWEGGPSKNSVYISSLY 455
Query: 274 FATKTATSIG-KNPRPTNEMEYVFMTVSWLLGVFVFAVLIGQ 314
F + TS+G N P+ ++E +F ++G ++A + G
Sbjct: 456 FTMTSLTSVGFGNIAPSTDIEKIFAVAIMMIGSLLYATIFGN 497
>sp|Q60603|KCNH1_MOUSE Potassium voltage-gated channel subfamily H member 1 OS=Mus
musculus GN=Kcnh1 PE=1 SV=1
Length = 989
Score = 61.6 bits (148), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 115/282 (40%), Gaps = 63/282 (22%)
Query: 93 SWLCLVTLSYLYNCFVIPLRVTFPYQTRSNLITWFVFDYVMDVIYILDLLLIKPRLIYLD 152
+W ++ + Y ++P V+F +TR N + W V D ++DVI+++D++L
Sbjct: 219 TWDWIILILTFYTAILVPYNVSF--KTRQNNVAWLVVDSIVDVIFLVDIVLNFHTTFVGP 276
Query: 153 DGFWIKDSKLTRIQYRRKLQYKNDLLSLMPFDLLYFVFGFE--CTFLRLPRLI----KIQ 206
G I D KL R+ Y K + DLLS +P+D++ + F+ P I +I
Sbjct: 277 AGEVISDPKLIRMNY-LKTWFVIDLLSCLPYDVINAFENVDEVSAFMGDPGKIGFADQIP 335
Query: 207 TFWEF--CNHFDSVLASPYVV------RVARTLTYMIY---------------LVHLNAC 243
E S+ +S VV RVAR L + I H AC
Sbjct: 336 PPLEGRESQGISSLFSSLKVVRLLRLGRVARKLDHYIEYGAAVLVLLVCVFGLAAHWMAC 395
Query: 244 AYYEISVRE-------GLGINSWVY------------DGKGNA-----------YIRCFY 273
+Y I E + NSW+Y +G G+ YI Y
Sbjct: 396 IWYSIGDYEIFDEDTKTIRNNSWLYQLALDIGTPYQFNGSGSGKWEGGPSKNSVYISSLY 455
Query: 274 FATKTATSIG-KNPRPTNEMEYVFMTVSWLLGVFVFAVLIGQ 314
F + TS+G N P+ ++E +F ++G ++A + G
Sbjct: 456 FTMTSLTSVGFGNIAPSTDIEKIFAVAIMMIGSLLYATIFGN 497
>sp|Q9Y3Q4|HCN4_HUMAN Potassium/sodium hyperpolarization-activated cyclic
nucleotide-gated channel 4 OS=Homo sapiens GN=HCN4 PE=1
SV=1
Length = 1203
Score = 58.9 bits (141), Expect = 5e-08, Method: Composition-based stats.
Identities = 60/272 (22%), Positives = 112/272 (41%), Gaps = 43/272 (15%)
Query: 82 EQQHTLGYWYIS--------WLCLVTLSYLYNCFVIPLRVTFPYQTRSNLITWFVFDYVM 133
E+ + G+W I W + L + N +IP+ +TF N W VF+ V
Sbjct: 245 ERVKSAGFWIIHPYSDFRFYWDLTMLLLMVGNLIIIPVGITF--FKDENTTPWIVFNVVS 302
Query: 134 DVIYILDLLL-IKPRLIYLDDGFWIKDSKLTRIQYRRKLQYKNDLLSLMPFDLLYFVFG- 191
D +++DL+L + ++ D+ I D + +++Y + + D +S +P D ++ +
Sbjct: 303 DTFFLIDLVLNFRTGIVVEDNTEIILDPQRIKMKYLKSW-FMVDFISSIPVDYIFLIVET 361
Query: 192 -FECTFLRLPRLIKIQTF---------------------WEFCNHFDSVLASPYVVRVAR 229
+ + R ++I F WE H LAS VVR+
Sbjct: 362 RIDSEVYKTARALRIVRFTKILSLLRLLRLSRLIRYIHQWEEIFHMTYDLASA-VVRIVN 420
Query: 230 TLTYMIYLVHLNACAYYEISVREG------LGINSWVYDGKGNAYIRCFYFATKTATSIG 283
+ M+ L H + C + + + + + IN+ V + G Y + A IG
Sbjct: 421 LIGMMLLLCHWDGCLQFLVPMLQDFPDDCWVSINNMVNNSWGKQYSYALFKAMSHMLCIG 480
Query: 284 KNPRPTNEMEYVFMT-VSWLLGVFVFAVLIGQ 314
+ M V++T +S ++G +A+ IG
Sbjct: 481 YGRQAPVGMSDVWLTMLSMIVGATCYAMFIGH 512
>sp|Q9JKA7|HCN4_RAT Potassium/sodium hyperpolarization-activated cyclic
nucleotide-gated channel 4 OS=Rattus norvegicus GN=Hcn4
PE=2 SV=1
Length = 1198
Score = 58.2 bits (139), Expect = 8e-08, Method: Composition-based stats.
Identities = 60/272 (22%), Positives = 111/272 (40%), Gaps = 43/272 (15%)
Query: 82 EQQHTLGYWYIS--------WLCLVTLSYLYNCFVIPLRVTFPYQTRSNLITWFVFDYVM 133
E+ + G+W I W + L + N +IP+ +TF N W VF+ V
Sbjct: 245 ERVKSAGFWIIHPYSDFRFYWDLTMLLLMVGNLIIIPVGITF--FKDENTTPWIVFNVVS 302
Query: 134 DVIYILDLLL-IKPRLIYLDDGFWIKDSKLTRIQYRRKLQYKNDLLSLMPFDLLYFVFG- 191
D +++DL+L + ++ D+ I D + +++Y + + D +S +P D ++ +
Sbjct: 303 DTFFLIDLVLNFRTGIVVEDNTEIILDPQRIKMKYLKSW-FVVDFISSIPVDYIFLIVET 361
Query: 192 -FECTFLRLPRLIKIQTF---------------------WEFCNHFDSVLASPYVVRVAR 229
+ + R ++I F WE H LAS VVR+
Sbjct: 362 RIDSEVYKTARALRIVRFTKILSLLRLLRLSRLIRYIHQWEEIFHMTYDLASA-VVRIVN 420
Query: 230 TLTYMIYLVHLNACAYYEISVREG------LGINSWVYDGKGNAYIRCFYFATKTATSIG 283
+ M+ L H + C + + + + + IN V + G Y + A IG
Sbjct: 421 LIGMMLLLCHWDGCLQFLVPMLQDFPHDCWVSINGMVNNSWGKQYSYALFKAMSHMLCIG 480
Query: 284 KNPRPTNEMEYVFMT-VSWLLGVFVFAVLIGQ 314
+ M V++T +S ++G +A+ IG
Sbjct: 481 YGRQAPVGMSDVWLTMLSMIVGATCYAMFIGH 512
>sp|Q9TV66|HCN4_RABIT Potassium/sodium hyperpolarization-activated cyclic
nucleotide-gated channel 4 OS=Oryctolagus cuniculus
GN=HCN4 PE=2 SV=1
Length = 1175
Score = 57.8 bits (138), Expect = 1e-07, Method: Composition-based stats.
Identities = 59/272 (21%), Positives = 112/272 (41%), Gaps = 43/272 (15%)
Query: 82 EQQHTLGYWYIS--------WLCLVTLSYLYNCFVIPLRVTFPYQTRSNLITWFVFDYVM 133
E+ + G+W I W + L + N +IP+ +TF N W VF+ V
Sbjct: 246 ERVKSAGFWIIHPYSDFRFYWDLTMLLLMVGNLIIIPVGITF--FKDENTTPWIVFNVVS 303
Query: 134 DVIYILDLLL-IKPRLIYLDDGFWIKDSKLTRIQYRRKLQYKNDLLSLMPFDLLYFVFG- 191
D +++DL+L + ++ D+ I D + +++Y + + D +S +P D ++ +
Sbjct: 304 DTFFLIDLVLNFRTGIVVEDNTDIILDPRRIKMKYLKSW-FVVDFVSSIPVDYIFLIVET 362
Query: 192 -FECTFLRLPRLIKIQTF---------------------WEFCNHFDSVLASPYVVRVAR 229
+ + R ++I F WE H LAS VVR+
Sbjct: 363 RIDSEVYKTARALRIVRFTKILSLLRLLRLSRLIRYIHQWEEIFHMTYDLASA-VVRIVN 421
Query: 230 TLTYMIYLVHLNACAYYEISVREG------LGINSWVYDGKGNAYIRCFYFATKTATSIG 283
+ M+ L H + C + + + + + +N+ V + G Y + A IG
Sbjct: 422 LIGMMLLLCHWDGCLQFLVPMLQDFPDDCWVSLNNMVNNSWGKQYSYALFKAMSHMLCIG 481
Query: 284 KNPRPTNEMEYVFMT-VSWLLGVFVFAVLIGQ 314
+ M V++T +S ++G +A+ IG
Sbjct: 482 YGRQAPMGMSDVWLTMLSMIVGATCYAMFIGH 513
>sp|O70507|HCN4_MOUSE Potassium/sodium hyperpolarization-activated cyclic
nucleotide-gated channel 4 OS=Mus musculus GN=Hcn4 PE=1
SV=2
Length = 1186
Score = 56.6 bits (135), Expect = 2e-07, Method: Composition-based stats.
Identities = 59/272 (21%), Positives = 111/272 (40%), Gaps = 43/272 (15%)
Query: 82 EQQHTLGYWYIS--------WLCLVTLSYLYNCFVIPLRVTFPYQTRSNLITWFVFDYVM 133
E+ + G+W I W + L + N +IP+ +TF N W VF+ V
Sbjct: 245 ERVKSAGFWIIHPYSDFRFYWDLTMLLLMVGNLIIIPVGITF--FKDENTTPWIVFNVVS 302
Query: 134 DVIYILDLLL-IKPRLIYLDDGFWIKDSKLTRIQYRRKLQYKNDLLSLMPFDLLYFVFG- 191
D +++DL+L + ++ D+ I D + +++Y + + D +S +P + ++ +
Sbjct: 303 DTFFLIDLVLNFRTGIVVEDNTEIILDPQRIKMKYLKSW-FVVDFISSIPVEYIFLIVET 361
Query: 192 -FECTFLRLPRLIKIQTF---------------------WEFCNHFDSVLASPYVVRVAR 229
+ + R ++I F WE H LAS VVR+
Sbjct: 362 RIDSEVYKTARAVRIVRFTKILSLLRLLRLSRLIRYIHQWEEIFHMTYDLASA-VVRIVN 420
Query: 230 TLTYMIYLVHLNACAYYEISVREG------LGINSWVYDGKGNAYIRCFYFATKTATSIG 283
+ M+ L H + C + + + + + IN V + G Y + A IG
Sbjct: 421 LIGMMLLLCHWDGCLQFLVPMLQDFPHDCWVSINGMVNNSWGKQYSYALFKAMSHMLCIG 480
Query: 284 KNPRPTNEMEYVFMT-VSWLLGVFVFAVLIGQ 314
+ M V++T +S ++G +A+ IG
Sbjct: 481 YGRQAPVGMSDVWLTMLSMIVGATCYAMFIGH 512
>sp|Q9MZS1|HCN1_RABIT Potassium/sodium hyperpolarization-activated cyclic
nucleotide-gated channel 1 OS=Oryctolagus cuniculus
GN=HCN1 PE=2 SV=2
Length = 822
Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/272 (21%), Positives = 111/272 (40%), Gaps = 43/272 (15%)
Query: 82 EQQHTLGYWYIS--------WLCLVTLSYLYNCFVIPLRVTFPYQTRSNLITWFVFDYVM 133
E+ T G+W I W ++ + + N +IP+ +TF T W +F+
Sbjct: 61 ERVKTAGFWIIHPYSDFRFYWDLIMLIMMVGNLVIIPVGITF--FTEQTTTPWIIFNVAS 118
Query: 134 DVIYILDLLL-IKPRLIYLDDGFWIKDSKLTRIQYRRKLQYKNDLLSLMPFDLLYFVF-- 190
D +++LDL++ + + D I D K+ ++ Y + + D +S +P D ++ +
Sbjct: 119 DTVFLLDLIMNFRTGTVNEDSSEIILDPKVIKMNYLKSW-FVVDFISSIPVDYIFLIVEK 177
Query: 191 GFECTFLRLPRLIKIQTF---------------------WEFCNHFDSVLASPYVVRVAR 229
G + + R ++I F WE H LAS VVR+
Sbjct: 178 GMDSEVYKTARALRIVRFTKILSLLRLLRLSRLIRYIHQWEEIFHMTYDLAS-AVVRIFN 236
Query: 230 TLTYMIYLVHLNACAYYEISVREG------LGINSWVYDGKGNAYIRCFYFATKTATSIG 283
+ M+ L H + C + + + + + +N V D G Y + A IG
Sbjct: 237 LIGMMLLLCHWDGCLQFLVPLLQDFPPDCWVSLNEMVNDSWGKQYSYALFKAMSHMLCIG 296
Query: 284 KNPRPTNEMEYVFMTV-SWLLGVFVFAVLIGQ 314
+ M +++T+ S ++G +A+ +G
Sbjct: 297 YGAQAPVSMSDLWITMLSMIVGATCYAMFVGH 328
>sp|O60741|HCN1_HUMAN Potassium/sodium hyperpolarization-activated cyclic
nucleotide-gated channel 1 OS=Homo sapiens GN=HCN1 PE=2
SV=3
Length = 890
Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/272 (21%), Positives = 111/272 (40%), Gaps = 43/272 (15%)
Query: 82 EQQHTLGYWYIS--------WLCLVTLSYLYNCFVIPLRVTFPYQTRSNLITWFVFDYVM 133
E+ T G+W I W ++ + + N +IP+ +TF T W +F+
Sbjct: 125 ERVKTAGFWIIHPYSDFRFYWDLIMLIMMVGNLVIIPVGITF--FTEQTTTPWIIFNVAS 182
Query: 134 DVIYILDLLL-IKPRLIYLDDGFWIKDSKLTRIQYRRKLQYKNDLLSLMPFDLLYFVF-- 190
D +++LDL++ + + D I D K+ ++ Y + + D +S +P D ++ +
Sbjct: 183 DTVFLLDLIMNFRTGTVNEDSSEIILDPKVIKMNYLKSW-FVVDFISSIPVDYIFLIVEK 241
Query: 191 GFECTFLRLPRLIKIQTF---------------------WEFCNHFDSVLASPYVVRVAR 229
G + + R ++I F WE H LAS VVR+
Sbjct: 242 GMDSEVYKTARALRIVRFTKILSLLRLLRLSRLIRYIHQWEEIFHMTYDLAS-AVVRIFN 300
Query: 230 TLTYMIYLVHLNACAYYEISVREG------LGINSWVYDGKGNAYIRCFYFATKTATSIG 283
+ M+ L H + C + + + + + +N V D G Y + A IG
Sbjct: 301 LIGMMLLLCHWDGCLQFLVPLLQDFPPDCWVSLNEMVNDSWGKQYSYALFKAMSHMLCIG 360
Query: 284 KNPRPTNEMEYVFMTV-SWLLGVFVFAVLIGQ 314
+ M +++T+ S ++G +A+ +G
Sbjct: 361 YGAQAPVSMSDLWITMLSMIVGATCYAMFVGH 392
>sp|Q9JKB0|HCN1_RAT Potassium/sodium hyperpolarization-activated cyclic
nucleotide-gated channel 1 OS=Rattus norvegicus GN=Hcn1
PE=2 SV=1
Length = 910
Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/272 (21%), Positives = 111/272 (40%), Gaps = 43/272 (15%)
Query: 82 EQQHTLGYWYIS--------WLCLVTLSYLYNCFVIPLRVTFPYQTRSNLITWFVFDYVM 133
E+ T G+W I W ++ + + N +IP+ +TF T W +F+
Sbjct: 114 ERVKTAGFWIIHPYSDFRFYWDLIMLIMMVGNLVIIPVGITF--FTEQTTTPWIIFNVAS 171
Query: 134 DVIYILDLLL-IKPRLIYLDDGFWIKDSKLTRIQYRRKLQYKNDLLSLMPFDLLYFVF-- 190
D +++LDL++ + + D I D K+ ++ Y + + D +S +P D ++ +
Sbjct: 172 DTVFLLDLIMNFRTGTVNEDSSEIILDPKVIKMNYLKSW-FVVDFISSIPVDYIFLIVEK 230
Query: 191 GFECTFLRLPRLIKIQTF---------------------WEFCNHFDSVLASPYVVRVAR 229
G + + R ++I F WE H LAS VVR+
Sbjct: 231 GMDSEVYKTARALRIVRFTKILSLLRLLRLSRLIRYIHQWEEIFHMTYDLAS-AVVRIFN 289
Query: 230 TLTYMIYLVHLNACAYYEISVREG------LGINSWVYDGKGNAYIRCFYFATKTATSIG 283
+ M+ L H + C + + + + + +N V D G Y + A IG
Sbjct: 290 LIGMMLLLCHWDGCLQFLVPLLQDFPPDCWVSLNEMVNDSWGKQYSYALFKAMSHMLCIG 349
Query: 284 KNPRPTNEMEYVFMTV-SWLLGVFVFAVLIGQ 314
+ M +++T+ S ++G +A+ +G
Sbjct: 350 YGAQAPVSMSDLWITMLSMIVGATCYAMFVGH 381
>sp|O88704|HCN1_MOUSE Potassium/sodium hyperpolarization-activated cyclic
nucleotide-gated channel 1 OS=Mus musculus GN=Hcn1 PE=1
SV=1
Length = 910
Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/272 (21%), Positives = 111/272 (40%), Gaps = 43/272 (15%)
Query: 82 EQQHTLGYWYIS--------WLCLVTLSYLYNCFVIPLRVTFPYQTRSNLITWFVFDYVM 133
E+ T G+W I W ++ + + N +IP+ +TF T W +F+
Sbjct: 114 ERVKTAGFWIIHPYSDFRFYWDLIMLIMMVGNLVIIPVGITF--FTEQTTTPWIIFNVAS 171
Query: 134 DVIYILDLLL-IKPRLIYLDDGFWIKDSKLTRIQYRRKLQYKNDLLSLMPFDLLYFVF-- 190
D +++LDL++ + + D I D K+ ++ Y + + D +S +P D ++ +
Sbjct: 172 DTVFLLDLIMNFRTGTVNEDSSEIILDPKVIKMNYLKSW-FVVDFISSIPVDYIFLIVEK 230
Query: 191 GFECTFLRLPRLIKIQTF---------------------WEFCNHFDSVLASPYVVRVAR 229
G + + R ++I F WE H LAS VVR+
Sbjct: 231 GMDSEVYKTARALRIVRFTKILSLLRLLRLSRLIRYIHQWEEIFHMTYDLAS-AVVRIFN 289
Query: 230 TLTYMIYLVHLNACAYYEISVREG------LGINSWVYDGKGNAYIRCFYFATKTATSIG 283
+ M+ L H + C + + + + + +N V D G Y + A IG
Sbjct: 290 LIGMMLLLCHWDGCLQFLVPLLQDFPPDCWVSLNEMVNDSWGKQYSYALFKAMSHMLCIG 349
Query: 284 KNPRPTNEMEYVFMTV-SWLLGVFVFAVLIGQ 314
+ M +++T+ S ++G +A+ +G
Sbjct: 350 YGAQAPVSMSDLWITMLSMIVGATCYAMFVGH 381
>sp|Q9M8S6|SKOR_ARATH Potassium channel SKOR OS=Arabidopsis thaliana GN=SKOR PE=1 SV=1
Length = 828
Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 107/260 (41%), Gaps = 43/260 (16%)
Query: 85 HTLGYWYISWLCLVTLSYLYNCFVIPLRVTFPYQTRSNLITWFVFDYVMDVIYILDLLLI 144
H WY +W + + LY+ F PL F NL F+ D + +++D++L
Sbjct: 76 HPDNRWYKAWTMFILIWALYSSFFTPLEFGFFRGLPENL---FILDIAGQIAFLVDIVLT 132
Query: 145 KPRLIYLDDGFWI--KDSKLTRIQYRR--------KLQYKNDLLSLMPFDLLYFVFG--F 192
F++ +DS+ R+ Y+R K + DLL+ MP+D++Y G
Sbjct: 133 ----------FFVAYRDSRTYRMIYKRSSIALRYLKSTFIIDLLACMPWDIIYKAAGEKE 182
Query: 193 ECTFLRLPRLIKIQTFWEFCNHFDSVLASPYV-VRVARTLTYMIYLVHLNACAYYEISV- 250
E +L L RL ++ F + + + Y+ R+ + + +Y H AC +Y ++
Sbjct: 183 EVRYLLLIRLYRVHRVILFFHKMEKDIRINYLFTRIVKLIFVELYCTHTAACIFYYLATT 242
Query: 251 ----REG------LGINSWVYDGKGN-----AYIRCFYFATKTATSIG-KNPRPTNEMEY 294
+EG L + + Y Y YFA T ++G + N E
Sbjct: 243 LPASQEGYTWIGSLKLGDYSYSKFREIDLWTRYTTSMYFAVVTMATVGYGDIHAVNMREM 302
Query: 295 VFMTVSWLLGVFVFAVLIGQ 314
+F V + + A LIG
Sbjct: 303 IFAMVYISFDMILGAYLIGN 322
>sp|Q38898|AKT2_ARATH Potassium channel AKT2/3 OS=Arabidopsis thaliana GN=AKT2 PE=1 SV=1
Length = 802
Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 73/299 (24%), Positives = 128/299 (42%), Gaps = 42/299 (14%)
Query: 44 KGQTEYRKLMDETLDYLRRLNVPPRIRERVKQWFSFTWEQQHTLGY-WYIS--------W 94
KG+ E +L+ L +L +PP ++ Q H W IS W
Sbjct: 27 KGREEEYDASSLSLNNLSKLILPP--------LGVASYNQNHIRSSGWIISPMDSRYRCW 78
Query: 95 LCLVTLSYLYNCFVIPLRVTFPYQT-RSNLITWFVFDYVMDVIYILDLLLIKPRLIYLDD 153
+ L Y+ +V P V F + + NL + D ++D+ + +D++L + Y+D+
Sbjct: 79 EFYMVLLVAYSAWVYPFEVAFLNSSPKRNLC---IADNIVDLFFAVDIVLTF-FVAYIDE 134
Query: 154 --GFWIKDSKLTRIQYRRKLQYKNDLLSLMPFDLL-YFVFG-----FECTFLRLPRLIKI 205
+++ K ++Y + D+ S +PFD + Y + G C L L R ++
Sbjct: 135 RTQLLVREPKQIAVRYLSTW-FLMDVASTIPFDAIGYLITGTSTLNITCNLLGLLRFWRL 193
Query: 206 QTFWEFCNHFDSVLASPYV-VRVARTLTYMIYLVHLNACAYYEISVREGLGINSWVYDGK 264
+ + + Y +R R L+ ++LVH C+YY I+ R +W D
Sbjct: 194 RRVKHLFTRLEKDIRYSYFWIRCFRLLSVTLFLVHCAGCSYYLIADRYPHQGKTWT-DAI 252
Query: 265 GN--------AYIRCFYFATKTATSIG-KNPRPTNEMEYVFMTVSWLLGVFVFAVLIGQ 314
N YI Y++ T T++G + +N +E VF+TV L + + A LIG
Sbjct: 253 PNFTETSLSIRYIAAIYWSITTMTTVGYGDLHASNTIEMVFITVYMLFNLGLTAYLIGN 311
>sp|Q9R1T9|KCNH4_RAT Potassium voltage-gated channel subfamily H member 4 OS=Rattus
norvegicus GN=Kcnh4 PE=2 SV=1
Length = 1017
Score = 50.1 bits (118), Expect = 2e-05, Method: Composition-based stats.
Identities = 55/250 (22%), Positives = 95/250 (38%), Gaps = 36/250 (14%)
Query: 94 WLCLVTLSYLYNCFVIPLRVTF------PYQTRSNLITWFVFDYVMDVIYILDLLLIKPR 147
W L+ L+ Y +P V F P +R L++ D +++++ILD++L R
Sbjct: 230 WDGLILLATFYVAVTVPYNVCFAGDDDTPITSRHTLVS----DIAVEMLFILDIIL-NFR 284
Query: 148 LIYLDDGFWIKDSKLTRIQYRRKLQYKNDLLSLMPFDLLYFVFGFECTFLRLPRLIKIQT 207
Y+ + + + + + DL++ +PFDLLY VF T L
Sbjct: 285 TTYVSQSGQVVSAPRSIGLHYLATWFFVDLIAALPFDLLY-VFNITVTSLVHLLKTVRLL 343
Query: 208 FWEFCNHFDSVLASPYVVRVARTLTYMIYLVHLNACAYYEISVREGLGINSWVYD----- 262
+ V + ++ L H AC +Y I RE + ++D
Sbjct: 344 RLLRLLQKLERYSQCSAVVLTLLMSVFALLAHWMACVWYVIGRREMEANDPLLWDIGWLH 403
Query: 263 ------------------GKGNAYIRCFYFATKTATSIG-KNPRPTNEMEYVFMTVSWLL 303
+ +AYI YF + TS+G N + E +F + L+
Sbjct: 404 ELGKRLEEPYVNGSAGGPSRRSAYIAALYFTLSSLTSVGFGNVCANTDAEKIFSICTMLI 463
Query: 304 GVFVFAVLIG 313
G + AV+ G
Sbjct: 464 GALMHAVVFG 473
>sp|Q9UQ05|KCNH4_HUMAN Potassium voltage-gated channel subfamily H member 4 OS=Homo
sapiens GN=KCNH4 PE=2 SV=1
Length = 1017
Score = 48.5 bits (114), Expect = 6e-05, Method: Composition-based stats.
Identities = 57/251 (22%), Positives = 96/251 (38%), Gaps = 38/251 (15%)
Query: 94 WLCLVTLSYLYNCFVIPLRVTF------PYQTRSNLITWFVFDYVMDVIYILDLLLIKPR 147
W L+ L+ Y +P V F P +R L++ D +++++ILD++L R
Sbjct: 229 WDGLILLATFYVAVTVPYNVCFSGDDDTPITSRHTLVS----DIAVEMLFILDIIL-NFR 283
Query: 148 LIYLD-DGFWIKDSKLTRIQYRRKLQYKNDLLSLMPFDLLYFVFGFECTFLRLPRLIKIQ 206
Y+ G I + + Y + DL++ +PFDLLY +F T L
Sbjct: 284 TTYVSQSGQVISAPRSIGLHYLATWFFI-DLIAALPFDLLY-IFNITVTSLVHLLKTVRL 341
Query: 207 TFWEFCNHFDSVLASPYVVRVARTLTYMIYLVHLNACAYYEISVREGLGINSWVYD---- 262
+ V + ++ L H AC +Y I RE + ++D
Sbjct: 342 LRLLRLLQKLERYSQCSAVVLTLLMSVFALLAHWMACIWYVIGRREMEANDPLLWDIGWL 401
Query: 263 -------------------GKGNAYIRCFYFATKTATSIG-KNPRPTNEMEYVFMTVSWL 302
+ +AYI YF + TS+G N + E +F + L
Sbjct: 402 HELGKRLEVPYVNGSVGGPSRRSAYIAALYFTLSSLTSVGFGNVCANTDAEKIFSICTML 461
Query: 303 LGVFVFAVLIG 313
+G + AV+ G
Sbjct: 462 IGALMHAVVFG 472
>sp|Q9JKA8|HCN3_RAT Potassium/sodium hyperpolarization-activated cyclic
nucleotide-gated channel 3 OS=Rattus norvegicus GN=Hcn3
PE=2 SV=1
Length = 780
Score = 48.1 bits (113), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 111/274 (40%), Gaps = 45/274 (16%)
Query: 82 EQQHTLGYWYIS--------WLCLVTLSYLYNCFVIPLRVTFPYQTRSNLITWFVFDYVM 133
E+ + G W I W ++ L + N V+P+ +TF + N W VF+ +
Sbjct: 75 ERVKSAGAWIIHPYSDFRFYWDLIMLLLMVGNLIVLPVGITFFKE--ENSPPWIVFNVLS 132
Query: 134 DVIYILDLLLIKPRLIYLDDGFWI-KDSKLTRIQYRRKLQYKNDLLSLMPFDLLYFVFGF 192
D ++LDL+L I +++G I + R +Y R + DL+S +P D ++ V
Sbjct: 133 DTFFLLDLVLNFRTGIVVEEGAEILLAPRAIRTRYLRTW-FLVDLISSIPVDYIFLVVEL 191
Query: 193 E----------CTFLRLPRLIKIQTF---------------WEFCNHFDSVLASPYVVRV 227
E LR+ R KI + WE H LAS VVR+
Sbjct: 192 EPRLDAEVYKTARALRIVRFTKILSLLRLLRLSRLIRYMHQWEEIFHMTYDLAS-AVVRI 250
Query: 228 ARTLTYMIYLVHLNACAYYEISVREGLGINSWVYDGK------GNAYIRCFYFATKTATS 281
+ M+ L H + C + + + + + WV + G Y + A
Sbjct: 251 FNLIGMMLLLCHWDGCLQFLVPMLQDFPSDCWVSMNRMVNHSWGRQYSHALFKAMSHMLC 310
Query: 282 IGKNPRPTNEMEYVFMTV-SWLLGVFVFAVLIGQ 314
IG + M V++T+ S ++G +A+ IG
Sbjct: 311 IGYGQQAPVGMPDVWLTMLSMIVGATCYAMFIGH 344
>sp|Q9P1Z3|HCN3_HUMAN Potassium/sodium hyperpolarization-activated cyclic
nucleotide-gated channel 3 OS=Homo sapiens GN=HCN3 PE=2
SV=2
Length = 774
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 110/274 (40%), Gaps = 45/274 (16%)
Query: 82 EQQHTLGYWYIS--------WLCLVTLSYLYNCFVIPLRVTFPYQTRSNLITWFVFDYVM 133
E+ + G W I W ++ L + N V+P+ +TF N W VF+ +
Sbjct: 76 ERVKSAGAWIIHPYSDFRFYWDLIMLLLMVGNLIVLPVGITF--FKEENSPPWIVFNVLS 133
Query: 134 DVIYILDLLLIKPRLIYLDDGFWI-KDSKLTRIQYRRKLQYKNDLLSLMPFDLLYFVFGF 192
D ++LDL+L I +++G I + R +Y R + DL+S +P D ++ V
Sbjct: 134 DTFFLLDLVLNFRTGIVVEEGAEILLAPRAIRTRYLRTW-FLVDLISSIPVDYIFLVVEL 192
Query: 193 E----------CTFLRLPRLIKIQTF---------------WEFCNHFDSVLASPYVVRV 227
E LR+ R KI + WE H LAS VVR+
Sbjct: 193 EPRLDAEVYKTARALRIVRFTKILSLLRLLRLSRLIRYIHQWEEIFHMTYDLAS-AVVRI 251
Query: 228 ARTLTYMIYLVHLNACAYYEISVREG------LGINSWVYDGKGNAYIRCFYFATKTATS 281
+ M+ L H + C + + + + + IN V G Y + A
Sbjct: 252 FNLIGMMLLLCHWDGCLQFLVPMLQDFPPDCWVSINHMVNHSWGRQYSHALFKAMSHMLC 311
Query: 282 IGKNPRPTNEMEYVFMTV-SWLLGVFVFAVLIGQ 314
IG + M V++T+ S ++G +A+ IG
Sbjct: 312 IGYGQQAPVGMPDVWLTMLSMIVGATCYAMFIGH 345
>sp|O88705|HCN3_MOUSE Potassium/sodium hyperpolarization-activated cyclic
nucleotide-gated channel 3 OS=Mus musculus GN=Hcn3 PE=1
SV=1
Length = 779
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 110/274 (40%), Gaps = 45/274 (16%)
Query: 82 EQQHTLGYWYIS--------WLCLVTLSYLYNCFVIPLRVTFPYQTRSNLITWFVFDYVM 133
E+ + G W I W ++ L + N V+P+ +TF N W VF+ +
Sbjct: 75 ERVKSAGAWIIHPYSDFRFYWDLIMLLLMVGNLIVLPVGITF--FKEENSPPWIVFNVLS 132
Query: 134 DVIYILDLLLIKPRLIYLDDGFWI-KDSKLTRIQYRRKLQYKNDLLSLMPFDLLYFVFGF 192
D ++LDL+L I +++G I + R +Y R + DL+S +P D ++ V
Sbjct: 133 DTFFLLDLVLNFRTGIVVEEGAEILLAPRAIRTRYLRTW-FLVDLISSIPVDYIFLVVEL 191
Query: 193 E----------CTFLRLPRLIKIQTF---------------WEFCNHFDSVLASPYVVRV 227
E LR+ R KI + WE H LAS VVR+
Sbjct: 192 EPRLDAEVYKTARALRIVRFTKILSLLRLLRLSRLIRYIHQWEEIFHMTYDLAS-AVVRI 250
Query: 228 ARTLTYMIYLVHLNACAYYEISVREGLGINSWVYDGK------GNAYIRCFYFATKTATS 281
+ M+ L H + C + + + + + WV + G Y + A
Sbjct: 251 FNLIGMMLLLCHWDGCLQFLVPMLQDFPSDCWVSMNRMVNHSWGRQYSHALFKAMSHMLC 310
Query: 282 IGKNPRPTNEMEYVFMTV-SWLLGVFVFAVLIGQ 314
IG + M V++T+ S ++G +A+ IG
Sbjct: 311 IGYGQQAPVGMPDVWLTMLSMIVGATCYAMFIGH 344
>sp|Q9TSZ3|KCNH2_CANFA Potassium voltage-gated channel subfamily H member 2 OS=Canis
familiaris GN=KCNH2 PE=2 SV=1
Length = 1158
Score = 46.2 bits (108), Expect = 3e-04, Method: Composition-based stats.
Identities = 51/210 (24%), Positives = 89/210 (42%), Gaps = 30/210 (14%)
Query: 128 VFDYVMDVIYILDLLLIKPRLIYLDDGFWIKDSKLTRIQYRRKLQYKNDLLSLMPFDLLY 187
V D+++D+++I+D +LI R Y++ + + K + D+++ +PFDLL
Sbjct: 453 VVDFIVDIMFIVD-ILINFRTTYVNANEEVVSHPGRIAVHYFKGWFLIDMVAAIPFDLLI 511
Query: 188 FVFGFE--CTFLRLPRLIKIQTFWEFCNHFDSVLASPYVVRVARTLTYMIYLV-HLNACA 244
F G E L+ RL+++ + + S Y V L L+ H AC
Sbjct: 512 FGSGSEELIGLLKTARLLRLVRVARKLDRY-----SEYGAAVLFLLMCTFALIAHWLACI 566
Query: 245 YYEISVREGLGINS---WV----------YDGKG-------NAYIRCFYFATKTATSIG- 283
+Y I E ++S W+ Y+ G + Y+ YF + TS+G
Sbjct: 567 WYAIGNMEQPHMDSRIGWLHNLGDQIGKPYNSSGLGGPSIKDKYVTALYFTFSSLTSVGF 626
Query: 284 KNPRPTNEMEYVFMTVSWLLGVFVFAVLIG 313
N P E +F L+G ++A + G
Sbjct: 627 GNVSPNTNSEKIFSICVMLIGSLMYASIFG 656
>sp|Q9UL51|HCN2_HUMAN Potassium/sodium hyperpolarization-activated cyclic
nucleotide-gated channel 2 OS=Homo sapiens GN=HCN2 PE=1
SV=3
Length = 889
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 117/272 (43%), Gaps = 43/272 (15%)
Query: 82 EQQHTLGYWYIS--------WLCLVTLSYLYNCFVIPLRVTFPYQTRSNLITWFVFDYVM 133
E+ + G W I W + L + N +IP+ +TF ++ + W VF+ V
Sbjct: 194 ERVKSAGAWIIHPYSDFRFYWDFTMLLFMVGNLIIIPVGITF-FKDETT-APWIVFNVVS 251
Query: 134 DVIYILDLLL-IKPRLIYLDDGFWIKDSKLTRIQYRRKLQYKNDLLSLMPFDLLYFVF-- 190
D +++DL+L + ++ D+ I D + + +Y R + D +S +P D ++ +
Sbjct: 252 DTFFLMDLVLNFRTGIVIEDNTEIILDPEKIKKKYLRTW-FVVDFVSSIPVDYIFLIVEK 310
Query: 191 GFECTFLRLPRLIKIQTF---------------------WEFCNHFDSVLASPYVVRVAR 229
G + + R ++I F WE H LAS V+R+
Sbjct: 311 GIDSEVYKTARALRIVRFTKILSLLRLLRLSRLIRYIHQWEEIFHMTYDLAS-AVMRICN 369
Query: 230 TLTYMIYLVHLNACAYYEISVREGLGINSWVY-DGKGN-AYIRCFYFATKTATS----IG 283
++ M+ L H + C + + + + N WV +G N ++ + FA A S IG
Sbjct: 370 LISMMLLLCHWDGCLQFLVPMLQDFPRNCWVSINGMVNHSWSELYSFALFKAMSHMLCIG 429
Query: 284 KNPRPTNEMEYVFMTV-SWLLGVFVFAVLIGQ 314
+ M +++T+ S ++G +A+ IG
Sbjct: 430 YGRQAPESMTDIWLTMLSMIVGATCYAMFIGH 461
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.330 0.143 0.477
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 118,100,064
Number of Sequences: 539616
Number of extensions: 4762901
Number of successful extensions: 14375
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 53
Number of HSP's that attempted gapping in prelim test: 14185
Number of HSP's gapped (non-prelim): 150
length of query: 314
length of database: 191,569,459
effective HSP length: 117
effective length of query: 197
effective length of database: 128,434,387
effective search space: 25301574239
effective search space used: 25301574239
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.9 bits)
S2: 61 (28.1 bits)