RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy4747
(414 letters)
>d2i53a1 a.74.1.1 (A:14-157) Cyclin K {Human (Homo sapiens) [TaxId:
9606]}
Length = 144
Score = 159 bits (403), Expect = 3e-48
Identities = 100/138 (72%), Positives = 119/138 (86%)
Query: 39 TMPYWYFDKKDIRNSPSFREGIDYETEQRYRREGARFIIDCGTKMDLGYNTMATGVVFFH 98
T P WY+DKKD+ ++PS EG+D TE RYRREGARFI D GT++ L Y+T+ATG+++FH
Sbjct: 7 TKPCWYWDKKDLAHTPSQLEGLDPATEARYRREGARFIFDVGTRLGLHYDTLATGIIYFH 66
Query: 99 RFYMYHSFKTFPRYVTASCCLFLAGKVEETPKKCKDVIKTARMLVDDKKFKTFGDDPREE 158
RFYM+HSFK FPRYVT +CCLFLAGKVEETPKKCKD+IKTAR L++D +F FGDDP+EE
Sbjct: 67 RFYMFHSFKQFPRYVTGACCLFLAGKVEETPKKCKDIIKTARSLLNDVQFGQFGDDPKEE 126
Query: 159 VMTLERILLQTIKFDLQV 176
VM LERILLQTIKFDLQV
Sbjct: 127 VMVLERILLQTIKFDLQV 144
>d2ivxa1 a.74.1.1 (A:7-149) Cyclin-T2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 143
Score = 145 bits (366), Expect = 8e-43
Identities = 46/139 (33%), Positives = 79/139 (56%), Gaps = 5/139 (3%)
Query: 43 WYFDKKDIRNSPSFREGIDYETEQRYRREGARFIIDCGTKMDLGYNTMATGVVFFHRFYM 102
W+F ++ + N+PS R G++ + E R++ A I + G ++++ T+ T +V+ HRFYM
Sbjct: 5 WFFTREQLENTPSRRCGVEADKELSCRQQAANLIQEMGQRLNVSQLTINTAIVYMHRFYM 64
Query: 103 YHSFKTFPRYVTASCCLFLAGKVEETPKKCKDVIKTARMLVDDKKFKTFGDDP-----RE 157
+HSF F + + +S LFLA KVEE +K + VIK A + +
Sbjct: 65 HHSFTKFNKNIISSTALFLAAKVEEQARKLEHVIKVAHACLHPLEPLLDTKCDAYLQQTR 124
Query: 158 EVMTLERILLQTIKFDLQV 176
E++ LE I+LQT+ F++ +
Sbjct: 125 ELVILETIMLQTLGFEITI 143
>d2i53a2 a.74.1.1 (A:158-267) Cyclin K {Human (Homo sapiens) [TaxId:
9606]}
Length = 110
Score = 133 bits (336), Expect = 6e-39
Identities = 76/108 (70%), Positives = 93/108 (86%), Gaps = 1/108 (0%)
Query: 177 DHPYSFLLKYAKSLKGDKTKLEKMLQMAWTFVNDSLCTTLCLQWEPEIIAVALMYLAGKL 236
+HPY FLLKYAK LKGDK K++K++QMAWTFVNDSLCTTL LQWEPEIIAVA+MYLAG+L
Sbjct: 1 EHPYQFLLKYAKQLKGDKNKIQKLVQMAWTFVNDSLCTTLSLQWEPEIIAVAVMYLAGRL 60
Query: 237 SKFEVVDWIGRNSKHLRWWEMFVEDMTMDLLEDICHQVLDLYSQSQQQ 284
KFE+ +W + + RWWE FV+D+ +D+LEDICHQ+LDLYSQ +QQ
Sbjct: 61 CKFEIQEWTSK-PMYRRWWEQFVQDVPVDVLEDICHQILDLYSQGKQQ 107
>d2ivxa2 a.74.1.1 (A:150-262) Cyclin-T2 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 113
Score = 125 bits (316), Expect = 6e-36
Identities = 28/112 (25%), Positives = 60/112 (53%), Gaps = 9/112 (8%)
Query: 177 DHPYSFLLKYAKSLKGDKTKLEKMLQMAWTFVNDSL-CTTLCLQWEPEIIAVALMYLAGK 235
+HP++ ++K + ++ K + Q ++ +SL TT CLQ++P +IA ++LA K
Sbjct: 1 EHPHTDVVKCTQLVRASK----DLAQTSYFMATNSLHLTTFCLQYKPTVIACVCIHLACK 56
Query: 236 LSKFEVVDWIGRNSKHLRWWEMFVEDMTMDLLEDICHQVLDLYSQSQQQASQ 287
S +E+ + WWE +T++LL+++ H+ L + ++ + +
Sbjct: 57 WSNWEIPVS----TDGKHWWEYVDPTVTLELLDELTHEFLQILEKTPNRLKK 104
>d1jkwa1 a.74.1.1 (A:11-161) Cyclin H (mcs2) {Human (Homo sapiens)
[TaxId: 9606]}
Length = 151
Score = 102 bits (254), Expect = 1e-26
Identities = 23/137 (16%), Positives = 53/137 (38%), Gaps = 8/137 (5%)
Query: 42 YWYFDKKDIRNSPSFREGIDYETEQRYRREGARFIIDCGTKMDLGY--NTMATGVVFFHR 99
+ + + P+ ++ E + + +++ + + + T ++F R
Sbjct: 20 FRCKAVANGKVLPNDPVFLEPHEEMTLCKYYEKRLLEFCSVFKPAMPRSVVGTACMYFKR 79
Query: 100 FYMYHSFKTFPRYVTASCCLFLAGKVEETPKKCKDVIKTARMLVDDKKFKTFGDDPREEV 159
FY+ +S + + C FLA KV+E + R ++ E++
Sbjct: 80 FYLNNSVMEYHPRIIMLTCAFLACKVDEFNVSSPQFVGNLRESPLGQEK------ALEQI 133
Query: 160 MTLERILLQTIKFDLQV 176
+ E +L+Q + F L V
Sbjct: 134 LEYELLLIQQLNFHLIV 150
>d1jkwa2 a.74.1.1 (A:162-287) Cyclin H (mcs2) {Human (Homo sapiens)
[TaxId: 9606]}
Length = 126
Score = 72.6 bits (178), Expect = 3e-16
Identities = 21/110 (19%), Positives = 39/110 (35%), Gaps = 11/110 (10%)
Query: 178 HPYSFLLKYAKSLK---GDKTKLEKMLQMAWTFVNDSLCTTLCLQWEPEIIAVALMYLAG 234
+PY + LK E + + A F+N T L + P IA+ + +
Sbjct: 1 NPYRPFEGFLIDLKTRYPILENPEILRKTADDFLNRIALTDAYLLYTPSQIALTAILSSA 60
Query: 235 KLSKFEVVDWIGRNSKHLRWWEMFVEDMT-MDLLEDICHQVLDLYSQSQQ 283
+ + + L M E+ T + L DI + +L + +
Sbjct: 61 SRAGITMESY-------LSESLMLKENRTCLSQLLDIMKSMRNLVKKYEP 103
>d1f5qb1 a.74.1.1 (B:6-146) Viral cyclin {Murine herpesvirus 68
[TaxId: 33708]}
Length = 141
Score = 59.6 bits (144), Expect = 2e-11
Identities = 19/133 (14%), Positives = 41/133 (30%), Gaps = 12/133 (9%)
Query: 44 YFDKKDIRNSPSFREGIDYETEQRYRREGARFIIDCGTKMDLGYNTMATGVVFFHRFYMY 103
+ + ++ +D +YR+ ++ + N V ++
Sbjct: 19 IYRSEREHDARMVGVNVDQHFTSQYRKVLTTWMFCVCKDLRQDNNVFPLAVALLDELFLS 78
Query: 104 HSFKTFPRYVTASCCLFLAGKVEET-PKKCKDVIKTARMLVDDKKFKTFGDDPREEVMTL 162
TA+ L +AGKV P K + + ++++TL
Sbjct: 79 TRIDRENYQSTAAVALHIAGKVRAYMPIKATQLAY-----LCGGATT------ADKLLTL 127
Query: 163 ERILLQTIKFDLQ 175
E L T+ +
Sbjct: 128 EVKSLDTLSWVAD 140
>d1bu2a1 a.74.1.1 (A:22-148) Viral cyclin {Herpesvirus saimiri
[TaxId: 10381]}
Length = 127
Score = 57.6 bits (139), Expect = 5e-11
Identities = 17/125 (13%), Positives = 38/125 (30%), Gaps = 14/125 (11%)
Query: 54 PSFREGIDYETE--QRYRREGARFIIDCGTKMDLGYNTMATGVVFFHRFYMYHSFKTFPR 111
P F + +TE R ++ +L + V R+
Sbjct: 14 PKFTSLWEIQTEVTVDNRTILLTWMHLLCESFELDKSVFPLSVSILDRYLCKKQGTKKTL 73
Query: 112 YVTASCCLFLAGKVEET-PKKCKDVIKTARMLVDDKKFKTFGDDPREEVMTLERILLQTI 170
+ C+ + K+ P + + F E++ E+ +L+ +
Sbjct: 74 QKIGAACVLIGSKIRTVKPMTVSKLTY-----LSCDCFT------NLELINQEKDILEAL 122
Query: 171 KFDLQ 175
K+D +
Sbjct: 123 KWDTE 127
>d1g3nc1 a.74.1.1 (C:16-147) Viral cyclin {Kaposi's
sarcoma-associated herpesvirus [TaxId: 37296]}
Length = 132
Score = 56.1 bits (135), Expect = 2e-10
Identities = 20/124 (16%), Positives = 39/124 (31%), Gaps = 12/124 (9%)
Query: 53 SPSFREGIDYETEQRYRREGARFIIDCGTKMDLGYNTMATGVVFFHRFYMYHSFKTFPRY 112
S S R+ ++ + +L N +A + R +
Sbjct: 20 SDSVFGTFQQSLTSHMRKLLGTWMFSVCQEYNLEPNVVALALNLLDRLLLIKQVSKEHFQ 79
Query: 113 VTASCCLFLAGKVEET-PKKCKDVIKTARMLVDDKKFKTFGDDPREEVMTLERILLQTIK 171
T S CL +A K+ P + F R+E++ E+ LL+ +
Sbjct: 80 KTGSACLLVASKLRSLTPISTSSLCY-----AAADSFS------RQELIDQEKELLEKLA 128
Query: 172 FDLQ 175
+ +
Sbjct: 129 WRTE 132
>d2cchb1 a.74.1.1 (B:181-308) Cyclin A {Cow (Bos taurus) [TaxId:
9913]}
Length = 128
Score = 54.6 bits (131), Expect = 6e-10
Identities = 25/140 (17%), Positives = 55/140 (39%), Gaps = 21/140 (15%)
Query: 42 YWYFDKKDIRNSPSFREGIDYETEQ-----RYRREGARFIIDCGTKMDLGYNTMATGVVF 96
+ Y + +++ P Y +Q R ++++ G + L T+ V +
Sbjct: 3 HTYLREMEVKCKPKV----GYMKKQPDITNSMRAILVDWLVEVGEEYKLQNETLHLAVNY 58
Query: 97 FHRFYMYHSFKTFPRYVTASCCLFLAGKVEET-PKKCKDVIKTARMLVDDKKFKTFGDDP 155
RF S + + + LA K EE P + + + + D +
Sbjct: 59 IDRFLSSMSVLRGKLQLVGTAAMLLASKFEEIYPPEVAEFVY-----ITDDTYT------ 107
Query: 156 REEVMTLERILLQTIKFDLQ 175
+++V+ +E ++L+ + FDL
Sbjct: 108 KKQVLRMEHLVLKVLTFDLA 127
>d1w98b2 a.74.1.1 (B:88-227) G1/S-specific cyclin-E1 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 140
Score = 47.3 bits (112), Expect = 3e-07
Identities = 19/114 (16%), Positives = 39/114 (34%), Gaps = 13/114 (11%)
Query: 63 ETEQRYRREGARFIIDCGTKMDLGYNTMATGVVFFHRFYMYHSFKTFPRY-VTASCCLFL 121
+ + R ++++ L T FF R+ + LF+
Sbjct: 37 LLQPKMRAILLDWLMEVCEVYKLHRETFYLAQDFFDRYMATQENVVKTLLQLIGISSLFI 96
Query: 122 AGKVEET-PKKCKDVIKTARMLVDDKKFKTFGDDPREEVMTLERILLQTIKFDL 174
A K+EE P K +E++T+E ++++ +K+ L
Sbjct: 97 AAKLEEIYPPKLHQFAYVTDGACS-----------GDEILTMELMIMKALKWRL 139
>d2cbna1 d.157.1.7 (A:1-305) Ribonuclease Z (RNase Z) {Escherichia
coli [TaxId: 562]}
Length = 305
Score = 33.6 bits (75), Expect = 0.042
Identities = 24/232 (10%), Positives = 60/232 (25%), Gaps = 23/232 (9%)
Query: 51 RNSPSFREGIDYETEQRYRREGARFIIDCGTK-----MDLGYNTMATGVVFFHRFYMYHS 105
RN + ++ + ++ DCG + +N +F + H
Sbjct: 17 RNVTA------ILLNLQHPTQSGLWLFDCGEGTQHQLLHTAFNPGKLDKIFISHLHGDHL 70
Query: 106 FKTFPRYVTASCCLFLAGKVEETPKKCKDVIKTARMLVDDKKFKTFGDDPREEVMTLERI 165
F + S + P+ ++ ++TA + L+
Sbjct: 71 FGLPGLLCSRSMSGIIQPLTIYGPQGIREFVETALRISGSWTDYPLEIVEIGAGEILDDG 130
Query: 166 LLQTIKFDLQV------------DHPYSFLLKYAKSLKGDKTKLEKMLQMAWTFVNDSLC 213
L + + L+ D P + + K+ L + L+ T +
Sbjct: 131 LRKVTAYPLEHPLECYGYRIEEHDAPGALNAQALKAAGVPPGPLFQELKAGKTITLEDGR 190
Query: 214 TTLCLQWEPEIIAVALMYLAGKLSKFEVVDWIGRNSKHLRWWEMFVEDMTMD 265
+ + + + G + + + + M
Sbjct: 191 QINGADYLAAPVPGKALAIFGDTGPCDAALDLAKGVDVMVHEATLDITMEAK 242
>d1aisb1 a.74.1.2 (B:1108-1205) Transcription factor IIB (TFIIB),
core domain {Archaeon Pyrococcus woesei [TaxId: 2262]}
Length = 98
Score = 30.2 bits (68), Expect = 0.11
Identities = 6/61 (9%), Positives = 20/61 (32%)
Query: 80 GTKMDLGYNTMATGVVFFHRFYMYHSFKTFPRYVTASCCLFLAGKVEETPKKCKDVIKTA 139
++ L + + + + C++ A ++ + P+ ++ A
Sbjct: 13 TAQLKLPRHVEEEAARLYREAVRKGLIRGRSIESVMAACVYAACRLLKVPRTLDEIADIA 72
Query: 140 R 140
R
Sbjct: 73 R 73
>d1vola1 a.74.1.2 (A:113-207) Transcription factor IIB (TFIIB), core
domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 95
Score = 28.0 bits (62), Expect = 0.67
Identities = 16/67 (23%), Positives = 29/67 (43%)
Query: 74 RFIIDCGTKMDLGYNTMATGVVFFHRFYMYHSFKTFPRYVTASCCLFLAGKVEETPKKCK 133
+ I +++L N + F + Y S K AS CL++A + E P+ K
Sbjct: 7 KEITTMADRINLPRNKVDRTNNLFRQAYEQKSLKGRANDAIASACLYIACRQEGVPRTFK 66
Query: 134 DVIKTAR 140
++ +R
Sbjct: 67 EICAVSR 73
>d1y44a1 d.157.1.7 (A:1-307) Ribonuclease Z (RNase Z) {Bacillus
subtilis [TaxId: 1423]}
Length = 307
Score = 29.3 bits (64), Expect = 0.73
Identities = 22/213 (10%), Positives = 51/213 (23%), Gaps = 17/213 (7%)
Query: 70 REGARFIIDCGTK-----MDLGYNTMATGVVFFHRFYMYHSFKTFPRYVTASCCLFLAGK 124
+ ++ DCG + +F + H + + S
Sbjct: 29 ERRSVWLFDCGEATQHQMLHTTIKPRKIEKIFITHMHGDHVYGLPGLLGSRSFQGGEDEL 88
Query: 125 VEETPKKCKDVIKTARMLVDDKKFKTFGDDPREEVMTLERILLQTIKFDLQ--------- 175
PK K I+T+ + EE + E +
Sbjct: 89 TVYGPKGIKAFIETSLAVTKTHLTYPLAIQEIEEGIVFEDDQFIVTAVSVIHGVEAFGYR 148
Query: 176 ---VDHPYSFLLKYAKSLKGDKTKLEKMLQMAWTFVNDSLCTTLCLQWEPEIIAVALMYL 232
D P S K + + + ++ T + + +
Sbjct: 149 VQEKDVPGSLKADVLKEMNIPPGPVYQKIKKGETVTLEDGRIINGNDFLEPPKKGRSVVF 208
Query: 233 AGKLSKFEVVDWIGRNSKHLRWWEMFVEDMTMD 265
+G + + + R+ + F ++
Sbjct: 209 SGDTRVSDKLKELARDCDVMVHEATFAKEDRKL 241
>d2cchb2 a.74.1.1 (B:309-432) Cyclin A {Cow (Bos taurus) [TaxId:
9913]}
Length = 124
Score = 27.9 bits (62), Expect = 1.0
Identities = 24/108 (22%), Positives = 38/108 (35%), Gaps = 11/108 (10%)
Query: 179 PYSFLLKYAKSLKGDKTKLEKMLQMAWTFVNDSLCTT-LCLQWEPEIIAVALMYLAGKLS 237
FL +Y + K+E + A SL L++ P +IA A +LA
Sbjct: 3 VNQFLTQYFLHQQPANCKVESL---AMFLGELSLIDADPYLKYLPSVIAGAAFHLALYTV 59
Query: 238 KFEVVDWIGRNSKHLRWWEMFVEDMTMDLLEDICHQVLDLYSQSQQQA 285
+ W + L + + L D+ HQ Q QQ+
Sbjct: 60 TGQ--SWP----ESLIRKTGYTLESLKPCLMDL-HQTYLKAPQHAQQS 100
>d1k3pa_ a.103.1.1 (A:) Citrate synthase {Escherichia coli [TaxId:
562]}
Length = 426
Score = 27.8 bits (61), Expect = 2.6
Identities = 10/30 (33%), Positives = 13/30 (43%), Gaps = 4/30 (13%)
Query: 6 LNEKGYFTYSRGYTGVKGNSVLFEHQICLI 35
L KG FT+ G+T E +I I
Sbjct: 34 LGSKGVFTFDPGFTST----ASCESKITFI 59
>d2hwja1 d.268.1.3 (A:4-204) Hypothetical protein Atu1540
{Agrobacterium tumefaciens [TaxId: 358]}
Length = 201
Score = 27.4 bits (61), Expect = 2.7
Identities = 7/21 (33%), Positives = 8/21 (38%), Gaps = 3/21 (14%)
Query: 359 HPVHAVVPPGSQYY---GHHR 376
H V V P + Y HH
Sbjct: 48 HIVPVVAGPKDRAYLIDHHHL 68
>d1qvca_ b.40.4.3 (A:) ssDNA-binding protein {Escherichia coli
[TaxId: 562]}
Length = 145
Score = 27.0 bits (59), Expect = 3.0
Identities = 7/43 (16%), Positives = 16/43 (37%)
Query: 263 TMDLLEDICHQVLDLYSQSQQQASQQDSPPQTQPEPSTKPPPQ 305
T +++ ++ + L + A + QP+ P Q
Sbjct: 98 TTEVVVNVGGTMQMLGGRQGGGAPAGGNIGGGQPQGGWGQPQQ 140
>d2guma1 e.76.1.1 (A:111-725) Glycoprotein B {Human herpesvirus 1
[TaxId: 10298]}
Length = 615
Score = 27.4 bits (61), Expect = 3.6
Identities = 7/26 (26%), Positives = 16/26 (61%)
Query: 261 DMTMDLLEDICHQVLDLYSQSQQQAS 286
D+ + +LED L++Y++ + + S
Sbjct: 562 DLNITMLEDHEFVPLEVYTRHEIKDS 587
>d2avna1 c.66.1.41 (A:1-246) Hypothetical methyltransferase TM1389
{Thermotoga maritima [TaxId: 2336]}
Length = 246
Score = 27.0 bits (58), Expect = 4.4
Identities = 32/219 (14%), Positives = 70/219 (31%), Gaps = 12/219 (5%)
Query: 55 SFREGIDYETEQRYRREGARFIIDCGTK-MDLGYNTMATGVVFFHRFYMYHSFKTFPRYV 113
S E ++ R + + +DLG T + R + +
Sbjct: 18 SMYETPKWKLYHRLIGSFLEEYLKNPCRVLDLGGGTGKWSLFLQERGFEVVLVDPSKEML 77
Query: 114 TASCCLFLAGKVEETPKKCKDVIKTARMLVDDKKFKTFGDDPREEVMTLERILLQTIKFD 173
+ + VE + ++ ++ ++ + + R+L+
Sbjct: 78 EVAREKGVKNVVEAKAEDLPFPSGAFEAVLALGDVLSYVENKDKAFSEIRRVLVPDGLLI 137
Query: 174 LQVDHPYSFLLKYAKSLKGDKTKLEKMLQMAWTFVNDSLCTTLCLQWEPEIIAVALMYLA 233
VD+ Y+FL + + K ++ + L+ T V +L + ++PE +
Sbjct: 138 ATVDNFYTFLQQMIE--KDAWDQITRFLKTQTTSVGTTLFSFNSYAFKPEDLD------- 188
Query: 234 GKLSKFEVVDWIGRNSKH-LRWWEMFVEDMTMDLLEDIC 271
L FE VD G E+ L +++
Sbjct: 189 -SLEGFETVDIRGIGVMEYPDERISEREETIFRLEQELS 226
>d1vyua1 b.34.2.1 (A:39-174) SH3-like domain of the L-type calcium
channel {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 136
Score = 25.4 bits (55), Expect = 7.5
Identities = 8/41 (19%), Positives = 18/41 (43%)
Query: 280 QSQQQASQQDSPPQTQPEPSTKPPPQSHLPPSKLKPDLVAP 320
+ +Q+A + +P + + PP S + + + V P
Sbjct: 92 KQEQKARRSGNPSSLSDIGNRRSPPPSLAKQKQKQAEHVPP 132
>d1n8pa_ c.67.1.3 (A:) Cystathionine gamma-lyase (CYS3) {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 393
Score = 26.0 bits (56), Expect = 9.4
Identities = 9/47 (19%), Positives = 19/47 (40%)
Query: 72 GARFIIDCGTKMDLGYNTMATGVVFFHRFYMYHSFKTFPRYVTASCC 118
GA ++ TK G++ + GV+ + +Y + + A
Sbjct: 193 GADIVVHSATKYINGHSDVVLGVLATNNKPLYERLQFLQNAIGAIPS 239
>d1itua_ c.1.9.7 (A:) Renal dipeptidase {Human (Homo sapiens)
[TaxId: 9606]}
Length = 369
Score = 25.8 bits (56), Expect = 9.7
Identities = 12/47 (25%), Positives = 20/47 (42%), Gaps = 3/47 (6%)
Query: 153 DDPREEVMTLERILLQTIKFDLQVDHPYSFLLKYAKSLKGDKTKLEK 199
D R+E ERI+ + D D P+ L + L+ ++ L
Sbjct: 1 DFFRDEA---ERIMRDSPVIDGHNDLPWQLLDMFNNRLQDERANLTT 44
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.320 0.136 0.432
Gapped
Lambda K H
0.267 0.0634 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,659,817
Number of extensions: 80624
Number of successful extensions: 335
Number of sequences better than 10.0: 1
Number of HSP's gapped: 316
Number of HSP's successfully gapped: 33
Length of query: 414
Length of database: 2,407,596
Length adjustment: 88
Effective length of query: 326
Effective length of database: 1,199,356
Effective search space: 390990056
Effective search space used: 390990056
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 54 (24.8 bits)